BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780285|ref|YP_003064698.1| arginyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (586 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780285|ref|YP_003064698.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039962|gb|ACT56758.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 586

 Score = 1214 bits (3141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/586 (100%), Positives = 586/586 (100%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD
Sbjct: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG
Sbjct: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS
Sbjct: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA
Sbjct: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ
Sbjct: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH
Sbjct: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD
Sbjct: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF
Sbjct: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR
Sbjct: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS
Sbjct: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586


>gi|315122845|ref|YP_004063334.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496247|gb|ADR52846.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 586

 Score =  987 bits (2551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/586 (79%), Positives = 531/586 (90%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M+LF DFSSR+ NY+K+ID +  +EKK LD IV+ERPR+  HGHLSTNAAMILSRPL LD
Sbjct: 1   MHLFTDFSSRMINYIKDIDFEKNIEKKYLDCIVVERPRNIMHGHLSTNAAMILSRPLSLD 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+TIAELI+ARIK+DPDVD V I GKGFINLYLSPSYL KILS IVVSGIEYGR+LIGKG
Sbjct: 61  PITIAELIIARIKMDPDVDFVSIGGKGFINLYLSPSYLSKILSFIVVSGIEYGRSLIGKG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCRCAVVGD LA+LM FSGYEVTREYYINDAGAQI+TLA S
Sbjct: 121 RKVNVEYVSANPTGPMHVGHCRCAVVGDVLANLMEFSGYEVTREYYINDAGAQIDTLAHS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           VF RYQQ L NND DLPEG+YPG YLK +GKEL DKY SELLNF EEKWLPIV+DY+V+A
Sbjct: 181 VFLRYQQVLDNNDFDLPEGFYPGAYLKAIGKELVDKYGSELLNFYEEKWLPIVRDYAVKA 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+II+DDLKALNI+HD+F+SE +FHRGD SPIRDII ++ R+GY+YEG+LP PK+K  +
Sbjct: 241 MMEIIKDDLKALNIRHDVFVSEKNFHRGDHSPIRDIIGDMGRKGYIYEGVLPAPKAKKNK 300

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D++ +Q+LFRSTMVGDD+DRPL KSDGSYTYFAADLAYFK KYERGFD M+YVMGSDH
Sbjct: 301 TFDINCEQILFRSTMVGDDIDRPLFKSDGSYTYFAADLAYFKYKYERGFDQMVYVMGSDH 360

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKRLEAVA+AV+ +K+++NVLLCELVRLYRDGMPIKMSKRAGDFITLR+VVDEVG D
Sbjct: 361 SGYVKRLEAVASAVAGEKSKVNVLLCELVRLYRDGMPIKMSKRAGDFITLRYVVDEVGCD 420

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD FPD+DFDLF
Sbjct: 421 PVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDFFPDIDFDLF 480

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P+  + Q+  +D +ELQL++HL EYPR++ENATI QEPY+LAFYL+DLASVFH HWSHGR
Sbjct: 481 PQKALSQDFAWDIAELQLVMHLLEYPRIVENATIFQEPYRLAFYLHDLASVFHSHWSHGR 540

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           ENPRL+F+Q +NR+LT+MRLQLV+AVAS+INSGLNIIGVESP+EMS
Sbjct: 541 ENPRLKFIQEDNRELTIMRLQLVYAVASVINSGLNIIGVESPHEMS 586


>gi|325293096|ref|YP_004278960.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060949|gb|ADY64640.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 585

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/588 (59%), Positives = 457/588 (77%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+KN L+ +D  K   EK    RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AELIV  ++ D DVDSV +AG GFINL +S  Y +++L+ ++  GI++GR+ IG 
Sbjct: 61  NPRALAELIVPALQADGDVDSVNVAGPGFINLKVSVGYWQRLLAYMIGQGIDFGRSKIGT 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA 
Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL  +   +P G+YPG YL  VG+ LAD+Y  +L   PEEKWLPIVKD ++ 
Sbjct: 181 SVFLRYREALGEDIGAIPSGFYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL+ LN++HD+F SE   H G+  PI   I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMVMIREDLETLNVKHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVSE K+++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-- 477
           D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FP L    
Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPGLALSQ 479

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D    +V       D +ELQL+  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+
Sbjct: 480 DDMSSSVALIS---DINELQLVAKLAEYPRLIESAALAHEPHRLAFYLYDLASSFHGHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G+++  LRF+   NR+L++ RL LV+AVA+++ SGL ++G ++P+EM
Sbjct: 537 KGKDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584


>gi|307317040|ref|ZP_07596481.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897128|gb|EFN27873.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 585

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/587 (58%), Positives = 454/587 (77%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+   L+ I+  I+ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARINRILESIEI-IREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           ++P  +A+LIV ++  DP+V  V +AG GFIN+ LS SY +K+L++I  +G++YGR+  G
Sbjct: 60  MNPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI  LA
Sbjct: 120 AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S F RY+QAL  + +++P G YPG YL  VG+ LAD+Y + L   PE+KW+P+VK+  +
Sbjct: 180 RSAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY+G LPPPK + 
Sbjct: 240 DAMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            ++ + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+
Sbjct: 300 PEEWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEA+A A+S   A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG
Sbjct: 359 DHGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD  
Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                     +  D +E+QL+  LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ 
Sbjct: 479 SVD-FAAAAGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G+ENP LRFV   NR+L++ RL LVHAVAS++ SGL+I G  +P+EM
Sbjct: 538 GKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584


>gi|222085780|ref|YP_002544310.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|254782936|sp|B9JEG3|SYR_AGRRK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221723228|gb|ACM26384.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 586

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/587 (58%), Positives = 453/587 (77%), Gaps = 4/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF  R+KN L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+LS+PLG
Sbjct: 1   MNLFTDFEVRIKNALEQIDI-VREKRSELDFGRIGVEPPRDASHGDVATNAAMVLSKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           ++P  +AE+I+A+++ D DV  V  AG GFIN+ LS  Y +++L++++  G ++GR+ +G
Sbjct: 60  MNPRALAEIIIAKLQEDADVADVSAAGPGFINIRLSVGYWQRLLATMISEGEKFGRSTVG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+VT+EYYINDAG+QI+ LA
Sbjct: 120 AGQKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLGFAGYDVTKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA ++ ++L   PEE+WLPI+++ ++
Sbjct: 180 RSVFIRYREALGEQVGEIPAGLYPGDYLVPVGESLAKEFGTKLRGMPEEQWLPIIRERAI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR DL+ALN+ HD+F SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 DAMMVMIRADLEALNVHHDVFFSERTLHANGAALIRTAINDLTFKGYVYKGALPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIY++G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFNEMIYILGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VSE KA++ VLLC+LV+L+R+G P+KMSKR+GDF+TLR VVDEVG
Sbjct: 359 DHGGYVKRLEAVARGVSEGKAKLTVLLCQLVKLFRNGEPVKMSKRSGDFVTLREVVDEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FPDLD  
Sbjct: 419 RDSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPDLDIA 478

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D +ELQL+  +AE+PR+IE A  AQEP+++AFYLYDLAS FHGHW+ 
Sbjct: 479 SLDLAKAVGGVISDPAELQLVAKIAEFPRIIEAAAQAQEPHRIAFYLYDLASSFHGHWNK 538

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P LRFV   NR+L++ RL LVHAVAS++ SGL I G  +P+EM
Sbjct: 539 GKDLPELRFVNDKNRELSIARLGLVHAVASVLKSGLGITGTAAPDEM 585


>gi|116251801|ref|YP_767639.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256449|emb|CAK07533.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 585

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/588 (57%), Positives = 455/588 (77%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+S++ +G +YGR+ +G
Sbjct: 60  TNPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSTLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 EGKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE++W+PIVKD ++
Sbjct: 180 RSVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 DAMMVMIREDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG
Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDL  D
Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDL--D 476

Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           + P N+    +   D +ELQL+  LAE+PR++E A  +QEP+++AFYLYD+AS FH HW+
Sbjct: 477 VSPENLAKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++ P LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 537 KGKDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|15965276|ref|NP_385629.1| arginyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307309299|ref|ZP_07588967.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|23822199|sp|Q92Q31|SYR_RHIME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15074456|emb|CAC46102.1| Probable arginyl-tRNA synthetase (arginine--tRNA ligase)
           [Sinorhizobium meliloti 1021]
 gi|306900300|gb|EFN30917.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 585

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/587 (58%), Positives = 453/587 (77%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+   L+ I+  I+ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARINRILESIEI-IREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           ++P  +A+LIV ++  DP+V  V +AG GFIN+ LS SY +K+L++I  +G++YGR+  G
Sbjct: 60  MNPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI  LA
Sbjct: 120 AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S F RY+QAL  + +++P G YPG YL  VG+ LAD+Y + L   PE+KW+P+VK+  +
Sbjct: 180 RSAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY+G LPPPK + 
Sbjct: 240 DAMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEA+A A+S   A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG
Sbjct: 359 DHGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD  
Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                     +  D +E+QL+  LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ 
Sbjct: 479 SVD-FAAAAGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G+ENP LRFV   NR+L++ RL LVHAVAS++ SGL+I G  +P+EM
Sbjct: 538 GKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584


>gi|86357446|ref|YP_469338.1| arginyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|109895025|sp|Q2K975|SYR_RHIEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86281548|gb|ABC90611.1| arginyl-tRNA synthetase (Arginine--tRNA ligase) protein [Rhizobium
           etli CFN 42]
          Length = 585

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 454/588 (77%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+SI+ +GI+YGR+ +G
Sbjct: 60  TNPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASIIGAGIDYGRSSLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G  VN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 EGRTVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++
Sbjct: 180 RSVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEEWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 DAMMAMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFEEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG
Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ F  L  D
Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAKEAFAGL--D 476

Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           + P ++    +   D +ELQL+  LAE+PR+IE+A  +QEP+++AFYLYDLAS FH HW+
Sbjct: 477 VSPEDLAKAVAGIEDPAELQLVAKLAEFPRIIESAAQSQEPHRIAFYLYDLASAFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++ P LRFV   NR+ T+ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 537 KGKDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|150396377|ref|YP_001326844.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166232845|sp|A6U8M9|SYR_SINMW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150027892|gb|ABR60009.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 585

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/590 (58%), Positives = 453/590 (76%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+   L+ ID  I+ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARINRILESIDV-IREKRSELDFRRINVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           ++P  +A+LI  ++  DP+V  V +AG GFIN+ LS SY +K+L+ I  +G++YGR+ +G
Sbjct: 60  MNPRALADLIGDKLAQDPEVAEVSVAGPGFINVRLSVSYWQKLLAVITRAGVDYGRSALG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AFSG++VT+EYYINDAG+QI  LA
Sbjct: 120 AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFSGFDVTKEYYINDAGSQIEVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S F RY+QAL  +  ++P G YPG YL   G+ LAD+Y + L   PE+KW+P+VK+  +
Sbjct: 180 RSAFLRYRQALGEDIGEIPAGLYPGDYLVPAGEALADEYGTSLRIMPEDKWMPLVKERVI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY+G+LPPPK + 
Sbjct: 240 DAMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGMLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEA+A A+S   A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG
Sbjct: 359 DHGGYVKRLEALARAISGGSAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF- 477
            D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD  
Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478

Query: 478 --DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             DL         +  D +E+QL+  LAEYPRV+E A  + EP+++AFYLYDLA+VFHGH
Sbjct: 479 SIDL----AGAAGAIADPTEMQLVAKLAEYPRVVEAAAFSHEPHRIAFYLYDLAAVFHGH 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G+ENP LRFV   NR+L++ RL LVHAVAS++ SGL+I G  +P+EM
Sbjct: 535 WNKGKENPALRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584


>gi|15889018|ref|NP_354699.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|23822194|sp|Q8UEP4|SYR_AGRT5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15156807|gb|AAK87484.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 585

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/594 (57%), Positives = 452/594 (76%), Gaps = 19/594 (3%)

Query: 1   MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+KN L+ +D  K   EK    RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AEL+V  ++ D DVD V +AG GFINL +S  Y +++L+ ++  G+++GR+ +G 
Sbjct: 61  NPRALAELLVPALQADGDVDGVNVAGPGFINLKVSVGYWQRLLADMIGQGVDFGRSTVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA 
Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL  +   +P G YPG YL  VG+ LAD+Y  +L   PEEKWLPIVKD ++ 
Sbjct: 181 SVFLRYREALGEDIGSIPSGLYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN++HD+F SE   H G+  PI   I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMVMIREDLALLNVRHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVSE K+++ VLLC+LV+L+RDG P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLFRDGEPVKMSKRSGDFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC+SIFRQA++ FP L    
Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCKSIFRQAQEAFPGL---- 475

Query: 480 FPRNVIPQESEF--------DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                 P   +         D +ELQL+  LAEYPR+IE+A ++ EP++LAFYLYDLA  
Sbjct: 476 -----APSAEDMAASVALISDINELQLVAKLAEYPRLIESAALSHEPHRLAFYLYDLAGS 530

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FHGHW+ G+++  LRF+   NR+L++ RL LV+AVA+++ SGL ++G ++P+EM
Sbjct: 531 FHGHWNKGKDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584


>gi|209549083|ref|YP_002281000.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238065092|sp|B5ZMF2|SYR_RHILW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|209534839|gb|ACI54774.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 585

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/593 (57%), Positives = 454/593 (76%), Gaps = 17/593 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A+++ D DV  V +AG GFIN+ L+  Y +++L++++ +G +YGR+ +G
Sbjct: 60  TNPRALADIIIAKLREDADVADVSVAGPGFINIRLAVGYWQRLLAAMIGAGTDYGRSTLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 EGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE++W+PIVKD ++
Sbjct: 180 RSVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL +LN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 DAMMVMIREDLASLNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG
Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           SDSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DLD  
Sbjct: 419 SDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFGDLD-- 476

Query: 479 LFPRNVIPQE------SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                V P+E         D +ELQL+  LAE+PR++E A  +QEP++LAFYLYDLAS F
Sbjct: 477 -----VSPEEFAQTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRLAFYLYDLASSF 531

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H HW+ G++ P LRFV   NR+ T+ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 532 HAHWNKGKDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|227821928|ref|YP_002825898.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340927|gb|ACP25145.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 589

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/587 (58%), Positives = 450/587 (76%), Gaps = 4/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF SR+KN L+ +D  ++ ++  +D  R+ IE PRD +HG ++TNAAM+L++ LG
Sbjct: 4   MNLFTDFESRIKNILESLDI-VREKRSDVDFGRVSIEPPRDPSHGDVATNAAMVLAKSLG 62

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A+LIV +++ DP+V  V +AG GFIN+ LS SY +K+LS++V +G ++GR+ +G
Sbjct: 63  TNPRALADLIVDKLRQDPEVAEVSVAGPGFINVRLSVSYWQKLLSAMVSAGTDFGRSTVG 122

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+V +EYYINDAG+QI+ LA
Sbjct: 123 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVAKEYYINDAGSQIDVLA 182

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S F RY+QAL     ++P G YPG YL  VG+ LAD++ + L   PE+KW+P+VK+  +
Sbjct: 183 RSAFLRYRQALGEEIGEIPAGLYPGDYLVPVGEALADEFGTSLRIMPEDKWMPLVKERVI 242

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY G LPPPK + 
Sbjct: 243 DAMMAMIREDLAALNVNHDVFFSERTLHDNGAARIRTAINDLTFKGHVYIGTLPPPKGQL 302

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+
Sbjct: 303 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFQEMIYVLGA 361

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEA+A A+SE  A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG
Sbjct: 362 DHGGYVKRLEALARAISEGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVG 421

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ FPDLD  
Sbjct: 422 RDPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCCSVFRQAKEAFPDLDLS 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                     +  D +ELQL+  LAEYPRV+E A ++QEP+++AFYLYDLA+ FH  W+ 
Sbjct: 482 SVDLAGAVIGAIVDPAELQLVAKLAEYPRVVEAAALSQEPHRIAFYLYDLAAAFHALWNK 541

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G+ENP LRFV   NR+L++ RL LVHAVAS++ SGL++ G  +P EM
Sbjct: 542 GKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSVTGTSAPEEM 588


>gi|241204410|ref|YP_002975506.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858300|gb|ACS55967.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 585

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/588 (57%), Positives = 452/588 (76%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF SR+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++ LG
Sbjct: 1   MNLFTDFESRIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKVLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+ ++K D DV  V +AG GFIN+ L+  Y +++L+S++ +G +YGR+ +G
Sbjct: 60  TNPRALADVIITKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSSLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 KGKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE++W+PIVKD ++
Sbjct: 180 RSVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IRDDL ALN+ HD+F SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 DAMMVMIRDDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VS+ +A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG
Sbjct: 359 DHGGYVKRLEAVARGVSDGQAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DL  D
Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFADL--D 476

Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           + P N+    +   D +ELQL+  LAE+PR++E A  +QEP+++AFYLYD+AS FH HW+
Sbjct: 477 VSPENLAKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++ P LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 537 KGKDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|222148975|ref|YP_002549932.1| arginyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254782937|sp|B9JXE6|SYR_AGRVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221735961|gb|ACM36924.1| arginyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 585

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 446/588 (75%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFADF +R+K  L+ +D  K K  +   DRIV+E PRD +HG  +TNAAM+L++PLG+
Sbjct: 1   MNLFADFENRIKTALETLDLVKEKRSELSFDRIVVEPPRDASHGDAATNAAMVLAKPLGV 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A+LI  ++K D D+  V +AG GF+N+ LS +Y +++L++++  G ++GR+  G 
Sbjct: 61  SPRVLADLIGEKLKEDADIAEVSVAGPGFLNIRLSVAYWQRLLANVIAGGTDFGRSQTGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY VT+EYYINDAG+QI+ LA 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA +Y   L N PEE+W+ IVKD ++ 
Sbjct: 181 SVFLRYREALGEAVGEIPAGLYPGDYLIPVGEALAQEYGVRLHNMPEEQWMEIVKDRAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY G LPPPK +  
Sbjct: 241 AMMVMIREDLAALNVHHDLFYSERQLHANGAAAIRTAINDLTFKGHVYRGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK KY+RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKYDRGFDRMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVSE KA++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVAKAVSEGKAKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-- 477
           DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ F D+D   
Sbjct: 420 DSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAREAFGDIDLSP 479

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D+    V       + SE+QLI  LAEYPR+IE +  + EP+++AFYLYDLAS FH HW+
Sbjct: 480 DVLEAAVT---GITEPSEVQLIAKLAEYPRIIEASAQSMEPHRIAFYLYDLASSFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++ P LRFV   NR+ ++ RL LVHAVAS++ SGL I G ++P EM
Sbjct: 537 KGKDQPELRFVNDKNRQSSLARLGLVHAVASVLQSGLAITGTDAPQEM 584


>gi|327191799|gb|EGE58799.1| arginyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 585

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/588 (58%), Positives = 450/588 (76%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A++K D DV  V +AG GFIN+ LS  Y +++L+S++ SG +YGR+ +G
Sbjct: 60  SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMIASGTDYGRSTLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++
Sbjct: 180 RSVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 SAMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG
Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L   
Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGL--A 476

Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +   ++    +   D +ELQL+  LAE+PRV+E A  +QEP+++AFYLYDLAS FH HW+
Sbjct: 477 VSAEDLAKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++   LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 537 KGKDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|190891507|ref|YP_001978049.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692531|sp|B3PXT5|SYR_RHIE6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190696786|gb|ACE90871.1| arginyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 585

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/588 (58%), Positives = 449/588 (76%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A++K D DV  V +AG GFIN+ LS  Y +++L+S++ SG +YGR+ +G
Sbjct: 60  SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++
Sbjct: 180 RSVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 SAMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRLEAVA  VS  KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG
Sbjct: 359 DHGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L+  
Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLEVS 478

Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
               ++    +   D +ELQL+  LAE+PRV+E A  +QEP+++AFYLYDLAS FH HW+
Sbjct: 479 --AEDLAKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++   LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 537 KGKDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|163759455|ref|ZP_02166540.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283052|gb|EDQ33338.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 586

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/586 (55%), Positives = 434/586 (74%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F DF  R+K  ++ +D  + K E     R+ +E PRD AH  +STNAAM+L++PLG+
Sbjct: 1   MNVFKDFEERIKTAVQALDAVREKGEAVDFARLAVEPPRDPAHDDISTNAAMVLAKPLGV 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I A+   D DV    +AG GF+N  L+P++ +++++ ++  G+++GR+ +G 
Sbjct: 61  NPRALAEQIAAQFSGDADVAETSVAGPGFLNFRLTPTFWQRLVADVIGKGVDFGRSNLGD 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+G++VT+EYY+NDAG+QI+ LA 
Sbjct: 121 GLKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFTGFDVTKEYYVNDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL  +  ++P G YPG YL  VG+ LA  +   L N PEE+WL I+KD ++ 
Sbjct: 181 SVFLRYREALGEDIGEIPPGLYPGDYLVPVGQALAADFGPRLHNMPEEEWLGILKDRAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  LN+ HD+F SE   H G  + IR  I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMVMIRDDLATLNVHHDVFFSERSLHAGSAAKIRTAINDLTFKGHVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSYTYFAADVAYFKDKFDRGFSEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAV  AVSE K ++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVNRAVSEGKTKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGC 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC S+ RQA ++FPDLD   
Sbjct: 420 DSVRFMMLYRKSSESLDFDFAKVTEQSKDNPVFYVQYAHARCASVMRQALEVFPDLDISP 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         SE+ LI  L EYPR++E A   QEP+++AFYLYDLAS+ H HW+ G
Sbjct: 480 EALGAADLSELSHESEVALIAKLGEYPRMLEAAASGQEPHRVAFYLYDLASMLHAHWNKG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R+ P LRFV   NR  T+ RL LV+AVAS++ SGL+I G ++P EM
Sbjct: 540 RDEPGLRFVNDKNRHSTVARLGLVYAVASVLKSGLSITGTDAPEEM 585


>gi|239831756|ref|ZP_04680085.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824023|gb|EEQ95591.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 603

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 19  MNIFADFDARIKKTLQDIDLKPKDGSELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 78

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +  D DV++V +AG GFINL L  SY ++ L++++  G ++GR+ +G 
Sbjct: 79  NPRELASRIAEALASDEDVETVDVAGPGFINLRLKASYWQRELAAMLNEGTDFGRSKLGS 138

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           GTKVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 139 GTKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 198

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ + LL  PE + L +VKD ++ 
Sbjct: 199 SVMVRYREALGEDIGEIPSGLYPGDYLVPVGQELAKEFGTRLLEMPEAEALALVKDRTID 258

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 259 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 318

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 319 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 377

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKRAG+FITLR VVDEVG 
Sbjct: 378 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRAGEFITLRDVVDEVGR 437

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D     D D 
Sbjct: 438 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 497

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   + F    D SE+ L+  LAEYPR+IE A I QEP++LAFYLYDLAS FH  
Sbjct: 498 -----VGMAANFGKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQ 552

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 553 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 602


>gi|256060982|ref|ZP_05451140.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261324984|ref|ZP_05964181.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261300964|gb|EEY04461.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 585

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPNLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|254704184|ref|ZP_05166012.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754853|ref|ZP_05998562.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261744606|gb|EEY32532.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 585

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|23501763|ref|NP_697890.1| arginyl-tRNA synthetase [Brucella suis 1330]
 gi|161618837|ref|YP_001592724.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225627365|ref|ZP_03785402.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701641|ref|ZP_05163469.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706913|ref|ZP_05168741.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709979|ref|ZP_05171790.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713979|ref|ZP_05175790.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716962|ref|ZP_05178773.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031472|ref|ZP_05445086.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159598|ref|ZP_05457360.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254878|ref|ZP_05460414.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256369305|ref|YP_003106813.1| arginyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168606|ref|ZP_05755417.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566566|ref|ZP_05837036.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218767|ref|ZP_05933048.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261222062|ref|ZP_05936343.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314377|ref|ZP_05953574.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317527|ref|ZP_05956724.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321734|ref|ZP_05960931.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261752194|ref|ZP_05995903.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261758080|ref|ZP_06001789.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988562|ref|ZP_06101119.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998027|ref|ZP_06110584.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852229|ref|ZP_06792902.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|38258388|sp|Q8G146|SYR_BRUSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083524|sp|A9MAQ0|SYR_BRUC2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|23347691|gb|AAN29805.1| arginyl-tRNA synthetase [Brucella suis 1330]
 gi|161335648|gb|ABX61953.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225617370|gb|EEH14415.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|255999465|gb|ACU47864.1| arginyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260156084|gb|EEW91164.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260920646|gb|EEX87299.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923856|gb|EEX90424.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294424|gb|EEX97920.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296750|gb|EEY00247.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303403|gb|EEY06900.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738064|gb|EEY26060.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261741947|gb|EEY29873.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|262552495|gb|EEZ08485.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660759|gb|EEZ31020.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820818|gb|EFG37817.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 585

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|163843148|ref|YP_001627552.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|189083525|sp|B0CLK2|SYR_BRUSI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163673871|gb|ABY37982.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 585

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMLLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|225852389|ref|YP_002732622.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264113|ref|ZP_05466645.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|254782946|sp|C0RIL0|SYR_BRUMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225640754|gb|ACO00668.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094331|gb|EEZ18176.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408895|gb|ADZ65960.1| arginyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538613|gb|ADZ86828.1| arginyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 585

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|153009679|ref|YP_001370894.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166232816|sp|A6X1G1|SYR_OCHA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151561567|gb|ABS15065.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 585

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K    + L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGDLDLSRIGVEPPRDSSHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +  D DV++V +AG GFINL L  +Y ++ LS+++  G ++GR+ +G 
Sbjct: 61  NPRELAGRIAEALASDADVETVDVAGPGFINLRLKATYWQRELSAMLNEGKDFGRSKLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G+KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GSKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  N  ++P G YPG YL  VG+ELA ++ S+LL  PE + L +VKD ++ 
Sbjct: 181 SVMLRYREALGENIGEIPSGLYPGDYLVPVGQELAKEFGSKLLEMPEAEALALVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKR+G+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRSGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D     D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 479

Query: 480 FPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   + FD     SE+ L+  LAEYPR+IE A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VGMAAHFDKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|17987372|ref|NP_540006.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256044550|ref|ZP_05447454.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260563903|ref|ZP_05834389.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990976|ref|ZP_06103533.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|23822196|sp|Q8YGR9|SYR_BRUME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17983059|gb|AAL52270.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260153919|gb|EEW89011.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001760|gb|EEZ14335.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 585

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+ GF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDHGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|306840369|ref|ZP_07473136.1| arginyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289654|gb|EFM60854.1| arginyl-tRNA synthetase [Brucella sp. BO2]
          Length = 585

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ LA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPESEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|62289822|ref|YP_221615.1| arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699747|ref|YP_414321.1| arginyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024063|ref|YP_001934831.1| arginyl-tRNA synthetase [Brucella abortus S19]
 gi|237815307|ref|ZP_04594305.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689127|ref|ZP_05152381.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693610|ref|ZP_05155438.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254697260|ref|ZP_05159088.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730159|ref|ZP_05188737.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257376|ref|ZP_05462912.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545431|ref|ZP_05821172.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260754626|ref|ZP_05866974.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757849|ref|ZP_05870197.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761672|ref|ZP_05874015.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883653|ref|ZP_05895267.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213876|ref|ZP_05928157.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297248226|ref|ZP_06931944.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|75496922|sp|Q57DN0|SYR_BRUAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109894975|sp|Q2YNJ9|SYR_BRUA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689361|sp|B2S5B0|SYR_BRUA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|62195954|gb|AAX74254.1| ArgS, arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615848|emb|CAJ10852.1| Arginyl-tRNA synthetase, class Ic:Aminoacyl-tRNA synthetase, class
           I:Arginyl tRNA synthetase N-terminal domain [Brucella
           melitensis biovar Abortus 2308]
 gi|189019635|gb|ACD72357.1| arginyl-tRNA synthetase [Brucella abortus S19]
 gi|237790144|gb|EEP64354.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096838|gb|EEW80713.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668167|gb|EEX55107.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672104|gb|EEX58925.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674734|gb|EEX61555.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873181|gb|EEX80250.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915483|gb|EEX82344.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297175395|gb|EFH34742.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 585

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/590 (56%), Positives = 433/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K   ++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTFQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGRLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+ YFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVTYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|254718981|ref|ZP_05180792.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983971|ref|ZP_06096706.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837329|ref|ZP_07470210.1| arginyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|306843774|ref|ZP_07476372.1| arginyl-tRNA synthetase [Brucella sp. BO1]
 gi|264662563|gb|EEZ32824.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306275852|gb|EFM57568.1| arginyl-tRNA synthetase [Brucella sp. BO1]
 gi|306407581|gb|EFM63779.1| arginyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 585

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ LA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|256113415|ref|ZP_05454264.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994813|ref|ZP_06107370.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765926|gb|EEZ11715.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 585

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV E SK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEPSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|148560686|ref|YP_001258851.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|166232762|sp|A5VQ54|SYR_BRUO2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148371943|gb|ABQ61922.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 585

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/590 (56%), Positives = 432/590 (73%), Gaps = 11/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + D +Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 GDWE-DCEQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P +MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPARMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                +   S F    D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  
Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|110634164|ref|YP_674372.1| arginyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123353590|sp|Q11HB8|SYR_MESSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110285148|gb|ABG63207.1| arginyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 585

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/586 (54%), Positives = 425/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADFS R+ N +K ++ K K   ++ L R+ +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFSDRIINAVKALELKPKEGGELDLSRVAVEPPRDPSHGDIATNAAMVLSKAVGE 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E + A +  DPDV    +AG GF+NL L   +    L  +++   +YGR+ +G 
Sbjct: 61  NPRALGERLAAALAEDPDVAEASVAGPGFVNLRLGNGFWHARLGEMLLLAGDYGRSKMGN 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD L++L+AF+GY+VTREYYINDAGAQI+ L  
Sbjct: 121 GHKVNVEYVSANPTGPMHVGHCRGAVVGDALSNLLAFAGYDVTREYYINDAGAQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +   +PEG YPG YLK VGK LAD+Y ++LL  P E+ L I KD ++ 
Sbjct: 181 SVLMRYREALGEDIGQIPEGLYPGDYLKPVGKALADEYGTKLLERPAEEALKIAKDTAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H G+   IR  I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIREDLAALNVHHDVFFSERSLHAGNGGTIRSAINDLTLKGHVYKGKLPPPKGQVL 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDG++TYFAAD+AY K KY RGF+++IYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTDVGDDIDRPLIKSDGTFTYFAADVAYMKDKYSRGFEHLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A+SE K  + VLLC+LV+L+R+G P++MSKRAG+F+TLR V+DEVG 
Sbjct: 360 HGGYVKRLEALARAISEGKLHLTVLLCQLVKLFRNGEPVRMSKRAGEFVTLRDVIDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RK+   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +      FD 
Sbjct: 420 DAVRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLNVRKFDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                     + D  E+ LI  LAEYPR+IE+A  A EP++LAFYLY+LA+ FH  W+ G
Sbjct: 480 EAMKAALHRLD-DPGEIALIRKLAEYPRLIESAAQALEPHRLAFYLYELANQFHVQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            E  RLRFV+ N+ +LT  RL LV AV  ++ SGL ++G ++P EM
Sbjct: 539 SETDRLRFVKVNDPELTHARLGLVQAVCDVVRSGLALVGADAPEEM 584


>gi|319783184|ref|YP_004142660.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169072|gb|ADV12610.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 585

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/588 (53%), Positives = 427/588 (72%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF++R+   ++ +D K K      L RI +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MNIFADFTARIIKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +   ++ D DV +  +AG GF+NL L   + +  L++++  G  YGR+ +G 
Sbjct: 61  NPRALAERLAQALRDDKDVAATEVAGPGFVNLRLKDGFWQTHLTALLGEGRNYGRSTVGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG+QI+ L  
Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGSQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL ++  ++P G YPG YL  VG+ L  ++   LL  P+++ L IVKD ++ 
Sbjct: 181 SAFLRYREALGDDIGEIPAGLYPGDYLVPVGQALVAEFGRSLLQMPDDEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN+ HD+F SE   H  +   IR  I++L  +G++Y+G LPPPK +  
Sbjct: 241 AMMAMIREDLAMLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A++ ++ ++ VLLC LV+L+R+G P++MSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEALARAIAGEEVKLTVLLCNLVKLFREGEPVRMSKRSGDFVTLREVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +   + +FD 
Sbjct: 420 DAIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFD- 478

Query: 480 FPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
             RN +   +    D  E+ LI  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+
Sbjct: 479 --RNSLASAAALLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G +NP LRFV+ N+R+LT  RL LV AV+ ++ SGL +IG  +P EM
Sbjct: 537 RGTDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584


>gi|319898837|ref|YP_004158930.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402801|emb|CBI76352.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 588

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/591 (54%), Positives = 431/591 (72%), Gaps = 10/591 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +F +F +++K  ++  D K K   KILD  +IV + PRD  HG LSTNAAM+L++ +G
Sbjct: 1   MNVFKNFENKIKKLIELSDIKEK-NGKILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVG 59

Query: 59  LDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L+P  +AE I+  +  D     +D + +AG GFIN+  + S+ ++ L +++  GI YGR 
Sbjct: 60  LNPRALAEKIIELLNNDQSFDYIDHINVAGPGFINIKFTQSFWQETLKTMIEKGISYGRT 119

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+G+EVT+EYYINDAG QI 
Sbjct: 120 EIGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGHEVTKEYYINDAGEQIK 179

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            LA SV  RY++AL    S++PEG YPG YL  +G+ LA K+  +LL   +E+ L IVK+
Sbjct: 180 ILAHSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAQKFGEKLLIIDQEEALSIVKE 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +++ +MM IIR DL ALNI HD+F SE   +  +   IR  I++L   GY+Y+G LPPPK
Sbjct: 240 HAIDSMMAIIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPK 299

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  +  R+Q LFRST +GDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY+
Sbjct: 300 GQNIEDWE-PREQTLFRSTDIGDDQDRALIKSDGSYTYFAADVAYFRDKFNRHFDEMIYI 358

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+DH+GYVKRLEAVA A+S  KA + VLLC+LV+L+RDG P++MSKRAG F+TLR VV+
Sbjct: 359 LGADHTGYVKRLEAVAKAISGNKATLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVE 418

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC SIFRQ ++ F  L
Sbjct: 419 EVGYDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSIFRQTQESF--L 476

Query: 476 DFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
             +L    +I    +  D SE+ LI  LAEYPR+IE A I +EP++LAFYLYDLAS FHG
Sbjct: 477 TENLSNDTMIAHLDQLVDESEILLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDLASHFHG 536

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           HW+ G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++P EM
Sbjct: 537 HWNKGNDNPNLRFIKTDNKELSLARLGLIQAIINILSSGLTIIGVKAPTEM 587


>gi|307946867|ref|ZP_07662202.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770531|gb|EFO29757.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 589

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/593 (53%), Positives = 428/593 (72%), Gaps = 13/593 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +FS R+K+ LK +D + K      L R+ +E PRD AHG L+TNAAM+LS+ +G+
Sbjct: 1   MNIFTEFSERVKDMLKGLDLQTKDGAAPDLSRVTVESPRDPAHGDLATNAAMVLSKQVGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +   +K DPDV  V +AG GFIN+ L+ S  +K+L S++  G ++GR+  G 
Sbjct: 61  KPRDLAEKLAEALKNDPDVQDVDVAGPGFINMRLAHSVWQKVLKSVLEQGQDFGRSDFGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGH R AVVGD LA+L+AF+GY+VTREYYINDAG+QI+TLA 
Sbjct: 121 GKKTNVEYVSANPTGPMHVGHTRGAVVGDVLANLLAFAGYDVTREYYINDAGSQIDTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +  ++P G YPG YLK VG++LA  Y   L + PEE+WLP+VK  S+ 
Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLAADYKESLKDKPEEEWLPVVKGLSIS 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            MM +IR+DL +LN+ HD+F SE   H    G+ S I +++D L  +  VY+G LPPPK 
Sbjct: 241 MMMDMIREDLASLNVHHDVFFSERTLHSRGEGNVSKIDEMLDALRNRDLVYQGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +     + DR+Q LFR++  GDD DR L KSDGSYTYFAAD+AYF+ K++R F  MIYV+
Sbjct: 301 QVPDDWE-DREQTLFRASDYGDDTDRALKKSDGSYTYFAADVAYFRDKFQRDFKEMIYVL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DHSGY KRL+AV  AVS+ +A++ V  C+LV+L+R G P KMSKR+GDFITLR VVDE
Sbjct: 360 GADHSGYAKRLQAVGKAVSDSQAEVVVRFCQLVKLFRGGEPFKMSKRSGDFITLRDVVDE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQY +ARCRS+ RQA +    + 
Sbjct: 420 VGRDPVRFMMLYRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCRSVMRQAAEELSGVA 479

Query: 477 FDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            D    +    E++F    D+ EL+L+  +A +P+++E A    EP+++AFYL+DLAS  
Sbjct: 480 ID----DKALAEADFSALTDSGELELLAKMAVWPKIVEAAAETHEPHRIAFYLHDLASSL 535

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           HGHW+ G+E P+LRF+ A++ KLT+ RL +V AV+S+I SGL+++GV++P EM
Sbjct: 536 HGHWNRGKELPQLRFINADDTKLTVARLAMVRAVSSVIASGLSVLGVDAPEEM 588


>gi|260459783|ref|ZP_05808037.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034585|gb|EEW35842.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 585

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/588 (53%), Positives = 422/588 (71%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF++R+   ++ +D K K      L RI +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MNIFADFTARVIKAVEALDLKDKDGVSPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ +   ++ D DV +  +AG GF+NL L   + +  LS+++  G  YGR+ IG 
Sbjct: 61  NPRVLADRLALVLRDDVDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGEGRNYGRSTIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGHCR AVVGD LA++MAF+GY+VT+EY INDAG+QI+ L  
Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANIMAFAGYDVTKEYVINDAGSQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY +AL  +  ++P G YPG YL  VG+ L  ++   LL  P+++ L IVKD ++ 
Sbjct: 181 SAFLRYSEALGEDIGEIPPGLYPGDYLVPVGEGLVKEFGRSLLQMPDDEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN+ HD+F SE   H  +   IR  I++L  +G++Y+G LPPPK +  
Sbjct: 241 AMMAMIREDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A++    ++ VLLC LV+L+RDG P++MSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEALARAIAGDDVKLTVLLCNLVKLFRDGEPVRMSKRSGDFVTLREVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D +RFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +   + +FD 
Sbjct: 420 DPIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFD- 478

Query: 480 FPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
             RN  V    S  D  E+ LI  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+
Sbjct: 479 --RNSLVAAVTSLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G +NP LRFV+ N+R+LT  RL LV AV+ ++ SGL +IG  +P EM
Sbjct: 537 RGTDNPDLRFVKVNDRELTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584


>gi|114707222|ref|ZP_01440120.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537418|gb|EAU40544.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 582

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/589 (53%), Positives = 420/589 (71%), Gaps = 12/589 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +FADF  R++  +  +   I      L+R+ +E PRD AHG L++NAAM+L++P+GL 
Sbjct: 1   MNMFADFEMRVRAAVSTVLTDIGHAVPDLERVTVEPPRDPAHGDLASNAAMVLAKPMGLK 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  ++  D D+ SV IAG GFIN+ L+P++  + L  ++ + ++YGR     G
Sbjct: 61  PRDLAEKIAEKLGADEDIASVEIAGPGFINMRLAPAFWPRHLREMLNARLDYGRG-APTG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+N+E+VSANPTGPMHVGHCR AVVGD LA L+AFSG EVT+EYY+NDAG QI  LA S
Sbjct: 120 RKINVEYVSANPTGPMHVGHCRGAVVGDALARLLAFSGEEVTKEYYVNDAGEQIGVLARS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL      +PEG YPG YLK +G+ LAD++   L + P+ +W PIV+D +++A
Sbjct: 180 AFLRYREALGEKIGMIPEGLYPGDYLKPLGRSLADEFGDSLRDKPQAEWEPIVRDRAIEA 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR+DLK L I+H++F SE   H  D   I + I NL  +GYVY G LPPPK K  +
Sbjct: 240 MMDMIREDLKTLGIEHEVFFSERTLHDADGGKIANAIANLEEKGYVYRGALPPPKGKPQE 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q L RST VGDD DRPL+KS+G YTYFAAD+AYF+ KYERGF  MI+V+G+DH
Sbjct: 300 DWE-DREQTLLRSTAVGDDQDRPLVKSNGLYTYFAADVAYFRDKYERGFSEMIFVLGADH 358

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKRLEAVA A+S   A+   +LC+LV+LYRDG P+KMSKR+GDF+TL  VV+EVG D
Sbjct: 359 SGYVKRLEAVAKAISGGTAKATAILCQLVKLYRDGAPVKMSKRSGDFVTLAEVVEEVGRD 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRFMML+RK+   LDFDF KV EQSK+NPVFYVQYA+AR  SIFRQA++   D+     
Sbjct: 419 PVRFMMLYRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARAHSIFRQARETGFDVSIG-- 476

Query: 481 PRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                P E++     D  E  LI  LAE+PRV+++A  A+EP++LAFYLYDLAS FH  +
Sbjct: 477 ----APIEADLNLLRDEGETGLIAKLAEFPRVVQSAANAREPHRLAFYLYDLASAFHAQY 532

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P+LRFV  +  + ++ RL LV AVA+++ SGL+IIG ++P EM
Sbjct: 533 NRGKDLPQLRFVNPSAPESSLARLALVDAVATVVRSGLDIIGAQAPEEM 581


>gi|13471188|ref|NP_102757.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|23822203|sp|Q98LC0|SYR_RHILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14021932|dbj|BAB48543.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 585

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/586 (53%), Positives = 422/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF++R+   ++ +D K K      L RI +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MNIFADFTARVTKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +   ++ D DV +  +AG GF+NL L   + +  LS+++  G  YGR+ +G 
Sbjct: 61  NPRALAEKLALALRDDKDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGDGRNYGRSTVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG QI+ L  
Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGGQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL +   ++P G YPG YL  +G+ LA ++   LL  PE++ L IVKD ++ 
Sbjct: 181 SVILRYREALGDEIGEIPPGLYPGDYLVPLGQALAKEFGHGLLQMPEDEALAIVKDRAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  LN+ HD+F SE   H  +   IR  I++L  +G++Y+G LPPPK +  
Sbjct: 241 AMMAMIRDDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A++  + ++ VLLC LV+LYRDG PI+MSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEALARAIAGDEVKLTVLLCNLVKLYRDGEPIRMSKRSGDFVTLREVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RK+   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +   + +FD 
Sbjct: 420 DAIRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    S  D  E+ LI  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G
Sbjct: 480 -KSLAAAAASLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP LRFV+ N+R+LT  RL LV AV+ ++ SGL +IG  +P EM
Sbjct: 539 TDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584


>gi|121602184|ref|YP_989046.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166232758|sp|A1USU3|SYR_BARBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120614361|gb|ABM44962.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 585

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/589 (53%), Positives = 424/589 (71%), Gaps = 9/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  LKE D K K  + + L +I ++ PRD  HG LSTNA+M+L++ +GL
Sbjct: 1   MNVFKNFEQKIKKSLKESDIKGKNGENLDLSKITVDPPRDSLHGDLSTNASMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P T+AE I+A +K DP +D + +AG GFIN+ L+ S+   +L  ++ SG +YGR  IG+
Sbjct: 61  NPRTLAEKIIALLKDDPSIDHLEVAGSGFINIKLTKSFWHDVLKLMITSGTDYGRTQIGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY VT+EYYINDAG QI  LA 
Sbjct: 121 GKQVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLQFAGYNVTKEYYINDAGKQIEILAA 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    + +PEG YPG YL  +G+ L  ++  +LL    EK L IVK+ S+ 
Sbjct: 181 SVLLRYREALGETINKIPEGLYPGEYLIPLGQSLVQEFGDKLLTMDNEKALSIVKERSID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  LNI HD+F SE   +  +   IR+ I++L   GYVY+G L PPK +T 
Sbjct: 241 AMMTMIRQDLATLNIHHDVFFSERMLYMNNAQAIRNTINDLTLNGYVYKGKLSPPKGQTL 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIYV+G+D
Sbjct: 301 EDWE-PHEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFHRHFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEAVA A+S  KA++   LC+LV+L+R+G P++MSKR G FITLR VV EVG 
Sbjct: 360 HAGYVKRLEAVAKAISGNKAKLTAFLCQLVKLFRNGHPVRMSKREGSFITLRDVVKEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFD  KV EQSK+NP+FYVQYA+ARC S+FRQA++   +L  + 
Sbjct: 420 DPVRFMMLYRKCEAPLDFDLEKVTEQSKDNPIFYVQYAHARCHSVFRQAQE---NLQIE- 475

Query: 480 FPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            P N   +   +   + SE+ LI  LA+YPR+IE A + +EP++LAFYLYDLAS FHGHW
Sbjct: 476 NPSNDLMIAHLDQLTNDSEISLIHKLAQYPRIIEQAIVYKEPHRLAFYLYDLASNFHGHW 535

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G +NP LRF++ NN+KL++ RL LV A  ++++SGL I+ V++P EM
Sbjct: 536 NKGNDNPELRFIKPNNKKLSLARLGLVQAFINVLSSGLKIVEVKAPTEM 584


>gi|319404147|emb|CBI77740.1| Arginyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 588

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/593 (53%), Positives = 428/593 (72%), Gaps = 14/593 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +F +F +++K  ++  D K K   +ILD  +IV + PRD  HG LSTNAAM+L++ +G
Sbjct: 1   MNVFKNFENKIKKLIELSDIKGK-NGEILDLSKIVADPPRDALHGDLSTNAAMVLAKSVG 59

Query: 59  LDPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L+P  +AE I+  +  D    D+D + IAG GFIN+    S+ +  L  ++  GI YG+ 
Sbjct: 60  LNPRALAEKIIKLLNSDQSVSDIDYINIAGPGFINIKFKQSFWQNALKLMIEKGISYGQI 119

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI 
Sbjct: 120 EIGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIK 179

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            LA SV  RY++AL    S++PEG YPG YL  +G+ LA K+  +LL   +E+ L  +++
Sbjct: 180 VLARSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSTIQE 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +++ AMM +IR DL ALNI HD+F SE   +  +   IR  I +L   GY+Y+GILPPPK
Sbjct: 240 HAIDAMMAMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGILPPPK 299

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            K  +  +  R+Q LFRST +GDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY+
Sbjct: 300 GKNVEDWE-PREQTLFRSTDIGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYI 358

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+DH+GYVKRLEAVA A+S  KA++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+
Sbjct: 359 LGADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVE 418

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D VRFMML+RK    LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F   
Sbjct: 419 EVGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFRTE 478

Query: 476 DFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           +    P N   +   +   D +E+ LI  L EYPR+IE A I +EP++LAFYLYDLAS F
Sbjct: 479 N----PSNSTMIAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNF 534

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           HGHW+ G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++  EM
Sbjct: 535 HGHWNKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587


>gi|319407165|emb|CBI80804.1| Arginyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 588

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/593 (53%), Positives = 426/593 (71%), Gaps = 14/593 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +F +F +++K  ++  D K K   +ILD  +IV + PRD  HG LSTNAAM+L++ +G
Sbjct: 1   MNVFKNFENKIKKLIESSDIKGK-NGEILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVG 59

Query: 59  LDPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L P  +AE I+  +  D    D+D + IAG GFIN+    S+ +  L S++  GI YG+ 
Sbjct: 60  LSPRALAEKIIKLLNSDQSVSDIDHIDIAGPGFINIKFKQSFWQNALKSMIEKGISYGQI 119

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI 
Sbjct: 120 EIGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIK 179

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            LA SV  RY+QAL    S++PEG YPG YL  +G+ LA K+  +LL   +E+ L I+++
Sbjct: 180 ILARSVMLRYRQALGQIISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSIIQE 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +++ AMM  IR DL ALNI HD+F SE   +  +   IR  I +L   GY+Y+G LPPPK
Sbjct: 240 HAIDAMMATIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGTLPPPK 299

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            K  +  +  R+Q LFRST VGDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY+
Sbjct: 300 GKNIEDWE-PREQTLFRSTDVGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYI 358

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+DH+GYVKRLEAVA A+S  K ++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+
Sbjct: 359 LGADHTGYVKRLEAVAKAISGNKVKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVE 418

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D VRFMML+RK    LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F   
Sbjct: 419 EVGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFLTE 478

Query: 476 DFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           +    P N   +   +   D +E+ LI  L EYPR+IE A I +EP++LAFYLYDLAS F
Sbjct: 479 N----PSNSTMIAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNF 534

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           HGHW+ G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++  EM
Sbjct: 535 HGHWNKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587


>gi|319405600|emb|CBI79223.1| Arginyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 588

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/592 (53%), Positives = 430/592 (72%), Gaps = 12/592 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +++K  ++  D K K E+ + L +IV + PRD  HG LSTNAAM+L++ +GL
Sbjct: 1   MNVFNNFENKIKKLIELSDIKGKNEEILDLSKIVTDPPRDSLHGDLSTNAAMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           +P  +A+ I+  I  D    +++ + +AG GFIN+  + S+ +  L S++  GI YG+  
Sbjct: 61  NPRALAQKIINLINSDQSFENINHIDVAGPGFINIKFTQSFWQNALKSMIEKGISYGQIQ 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI  
Sbjct: 121 IGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGYEVTKEYYINDAGEQIKV 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA SV  RY++AL    S++PEG YPG YL  +G+ LA K+S +LL   +++ L IV ++
Sbjct: 181 LARSVMLRYREALGEKISEIPEGLYPGEYLIPLGQSLAKKFSDKLLIIDQKEALSIVAEH 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++ AMM +IR DL ALNI HD+F SE   +  +   IR  I++L   GY+Y+G LPPPK 
Sbjct: 241 AIDAMMVMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  +  R+Q LFRST +GDD DR L+KSDGSYTYFA D+AYF+ K+ R FD MIY++
Sbjct: 301 QNLEDWE-PREQTLFRSTDIGDDQDRSLIKSDGSYTYFATDVAYFRDKFNRHFDEMIYIL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GYVKRLEAVA A+S  KA++ VLLC+LV+L+R G P++MSKRAG F+TLR VV+E
Sbjct: 360 GADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRHGRPVRMSKRAGSFVTLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D +RFMML+RK    LDFDF KV E+SK+NP+FYVQYA+ARC SIFRQA+++F + +
Sbjct: 420 VGHDPIRFMMLYRKCEVPLDFDFAKVTEKSKDNPIFYVQYAHARCHSIFRQAQEVFLNEN 479

Query: 477 FDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
               P N       +   D SE+ LI  LAEYPR+IE A   +EP++LAFYLYDLAS FH
Sbjct: 480 ----PSNHTMTAHLDQLIDESEILLIRKLAEYPRIIEQAVTHKEPHRLAFYLYDLASYFH 535

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           GHW+ G +NP LRF+  +N++L++ RL L+ A+ +I++SGL IIGV++P EM
Sbjct: 536 GHWNKGNDNPNLRFIIPDNKELSLARLGLIQAILNILSSGLTIIGVKAPTEM 587


>gi|118589112|ref|ZP_01546519.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118438441|gb|EAV45075.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 589

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/596 (52%), Positives = 420/596 (70%), Gaps = 19/596 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF+ R+K+ L+++D K    E   L R+V+E PRD AHG L+TNAAM+L++PLG+
Sbjct: 1   MNIFADFTQRVKDALQDLDLKDSNGESPDLSRVVVEAPRDPAHGDLATNAAMVLAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +VAR+  DP++    IAG GFINL ++ +   ++L+S++  GI +G      
Sbjct: 61  KPRDVAEQLVARLNADPEITETSIAGPGFINLRVAQTVWHRVLASVLAEGIRFGAQERSP 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+E+VSANPTGPMHVGH R AVVGD LA+++AF+G EV +EYYINDAG+QI+TLA 
Sbjct: 121 APKVNVEYVSANPTGPMHVGHIRGAVVGDALANILAFAGNEVVKEYYINDAGSQIDTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +  ++P G YPG YLK VG++L  ++ S L +  E +WLP+VK+ ++ 
Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLKAEFGSSLADMEEREWLPLVKERAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           AM+++IR DL AL ++H++F SE   H    G+ S I  +++ L  +G +YEG LPPPK 
Sbjct: 241 AMLELIRQDLAALGVEHEVFYSERTLHDRGEGNGSKIDHMLETLRNKGLIYEGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +     + DR+Q LFR++  GDD DR L KSDGSYTYFAAD+AYF+ K+ERGF   IYV+
Sbjct: 301 QVPDDWE-DREQTLFRASDFGDDTDRALKKSDGSYTYFAADVAYFQDKFERGFTETIYVL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY KRL+AV  A+S+ K ++ V  C+LV+L RDG P+KMSKR+GDFITLR VVDE
Sbjct: 360 GADHGGYAKRLQAVGKAISDGKTEVVVRFCQLVKLMRDGEPVKMSKRSGDFITLRDVVDE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA D   +  
Sbjct: 420 VGPDPVRFMMLFRKNDAPLDFDFKKVTEQSKDNPVFYVQYGHARCCSVLRQAADELKEAG 479

Query: 477 F---DLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           F   DL         ++F    D  E +L   +AE+P+V+E A    EP+++AFYL++LA
Sbjct: 480 FAVEDL-------ARADFSLLDDVGEQELFAKMAEWPKVVEAAAETHEPHRIAFYLHELA 532

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S  HGHW+ G E P LRF+QA N KLT+ RL LV AV+ ++ SGL I+GV +P EM
Sbjct: 533 SSLHGHWNKGYELPHLRFIQAGNLKLTLARLALVRAVSLVLASGLTILGVNAPEEM 588


>gi|328543964|ref|YP_004304073.1| Arginyl-tRNA synthetase ArgS [polymorphum gilvum SL003B-26A1]
 gi|326413708|gb|ADZ70771.1| Arginyl-tRNA synthetase ArgS [Polymorphum gilvum SL003B-26A1]
          Length = 589

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 312/589 (52%), Positives = 415/589 (70%), Gaps = 5/589 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F++R++  +  ++        + L RI +E PRD AHG L+TNAAMIL++PLG+
Sbjct: 1   MNIFVEFTARVQAAVAGLEAVAAAGPDLDLSRITVESPRDPAHGDLATNAAMILAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I A +  D +V  V +AG GFINL ++P+   ++L + V  G ++GR+ +G 
Sbjct: 61  KPRDLAEQIAAALGRDDEVAEVSVAGPGFINLKVAPAVWERVLRAAVTEGSDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           GTKVN+E+VSANPTGPMHVGH R AV GD LA+L+A++GYEVTREYYINDAG+QI TLA 
Sbjct: 121 GTKVNVEYVSANPTGPMHVGHTRGAVFGDALANLLAYAGYEVTREYYINDAGSQIETLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +  ++P G YPG YLK VG  LA  +   LL+  E  WLPIVKD ++ 
Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGAALAAAHGQALLSMNEAGWLPIVKDAAIT 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            MM +IR DL+ LN+ HD+F SE   H    G PS I  ++D L  +G VYEG LPPPK 
Sbjct: 241 GMMDLIRADLELLNVHHDVFFSERTLHERSDGTPSQIDLMLDRLRSRGLVYEGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  + DR+Q LFR+T  GDD+DRPL KSDG+YTYFAAD+AYF  KY+RGF+ M+YV+
Sbjct: 301 QLPEDWE-DREQTLFRATDFGDDIDRPLKKSDGTYTYFAADVAYFLSKYQRGFEEMVYVL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYVKRLEAV  A+S  +A + V LC+LV+L+R G P++MSKR+GDFITLR VV+E
Sbjct: 360 GADHGGYVKRLEAVGKAISGGEATVIVRLCQLVKLFRAGEPVRMSKRSGDFITLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA +  PDLD
Sbjct: 420 VGRDPVRFMMLFRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCCSVLRQAGEELPDLD 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 +        D  EL LI  LA +P++++ A  A EP+++AF+L+DLAS  H HW
Sbjct: 480 LSDAALSAADLSHLRDVGELDLIAKLALWPKMVDAAAEAHEPHRIAFFLHDLASSLHAHW 539

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G+E P+LRF+   N   T+ RL LV AV+ ++ SGL ++GV++P EM
Sbjct: 540 NRGKEMPQLRFINTENTGSTLARLALVRAVSLVLASGLAVLGVDAPPEM 588


>gi|49475743|ref|YP_033784.1| arginyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647809|sp|Q6G316|SYR_BARHE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49238550|emb|CAF27790.1| Arginyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 585

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 306/589 (51%), Positives = 428/589 (72%), Gaps = 9/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  L+  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++  GL
Sbjct: 1   MNVFKNFEKKIKKSLESSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSTGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I+  +K DP V+S+ +AG GFIN+ L+  + + ++ S++  GI YGR  +G+
Sbjct: 61  NPRALAEKIIELLKNDPSVESINVAGPGFINIKLTKPFWQDLIKSMLEKGISYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++  +LL   +E+ L IVK+ ++ 
Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFGDKLLTIDKEEALSIVKERAIH 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL ALNI HDIF SE   +  +   IR+ I++L  +GY+Y+G LPPPK + T
Sbjct: 241 EMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLKGYIYKGKLPPPKGQNT 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWE-PCEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S  KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVGS
Sbjct: 360 HAGYVKRLEAMAKAISNDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGS 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF--PDLDF 477
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++     ++  
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQETLCIENISN 479

Query: 478 DLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           D     +I   +   D +E+ LI  L+EYPR+IE A + +EP++LAFYLYDLAS FH HW
Sbjct: 480 D----KIIEHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHTHW 535

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G +N  LRF+Q ++R L+  RL L+ A+ +I++SGL I+G+++  EM
Sbjct: 536 NKGSDNLNLRFIQPDDRNLSFARLGLIQAIMNILSSGLAIVGIKAATEM 584


>gi|304391801|ref|ZP_07373743.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296030|gb|EFL90388.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 587

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 304/585 (51%), Positives = 401/585 (68%), Gaps = 4/585 (0%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F DF  R+ N L+ +   ++    +  R+ +E PRD +HG L+TNAAMIL++P+  +P 
Sbjct: 4   VFQDFEQRITNVLQALPDVVESGADV-SRLTVEPPRDLSHGDLATNAAMILAKPMKTNPR 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  I A ++ D DV SV IAG GFINL L   +  + L+ ++  G  YG +  G G K
Sbjct: 63  ALAATIAAELEKDADVASVEIAGPGFINLRLVDGFWSRELTRVLTEGRRYGADATGNGKK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD +A+L+ F+GY+V REYY NDAG QI+ LA S F
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDAMANLLEFAGYDVVREYYTNDAGGQIDVLARSAF 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY++AL  +   +PEG YPG YLK +G+ L D +   LL   E   L IV+  ++ AMM
Sbjct: 183 LRYREALGQDIGKIPEGLYPGEYLKPLGQSLVDAHGDALLTMDESDMLAIVRPAAIDAMM 242

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +IR DL AL + HD+F SE   H G    S I   ++ L   G VY G LPPPK    +
Sbjct: 243 DLIRADLAALGVHHDVFFSERSLHAGGEQGSAISKAVNRLTDMGLVYTGTLPPPKGTAPE 302

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+QLLFRST VGDD+DR L KS G YTYFAAD+ YF+ K++RGF+ M++V+G+DH
Sbjct: 303 DWE-DREQLLFRSTDVGDDMDRALQKSSGDYTYFAADVGYFQDKFDRGFEEMVFVLGADH 361

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKR+EA+  A+SE  A++ + LC+LV+L+RDG P+ MSKR+G+FITLR VVDEVG D
Sbjct: 362 GGYVKRMEALGKAISEDTAKVTIRLCQLVKLFRDGEPVTMSKRSGNFITLREVVDEVGRD 421

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN   LDFDF KVKEQS++NP+FYVQYA+ARC S+ RQA    P+LD    
Sbjct: 422 AVRFMMLYRKNDAPLDFDFAKVKEQSRDNPIFYVQYAHARCHSVLRQAARDMPNLDISAD 481

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                  E   D  E  L+  LAEYPRVI+ A  +QEP++L+FYLYDLA++ HG W+ GR
Sbjct: 482 ALRAAKTELLLDDGEDGLMRKLAEYPRVIDAAARSQEPHRLSFYLYDLAALLHGQWNKGR 541

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  LRF+   N +LT+ RL LV AV+ II SGL IIG ++P EM
Sbjct: 542 DDVTLRFIHQENPELTLARLGLVTAVSEIIASGLAIIGADAPQEM 586


>gi|298291873|ref|YP_003693812.1| arginyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928384|gb|ADH89193.1| arginyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 588

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 315/589 (53%), Positives = 411/589 (69%), Gaps = 6/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA F+  +++ + ++  +  V   I   R+V+E PRD +HG L+TNAAM+L++  G+
Sbjct: 1   MNLFAIFADHVRDAVAQLATEGAVPAGIDTTRVVVEPPRDASHGDLATNAAMVLAKDAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A+ + A++   P V  V +AG GFIN+ L  SY  +IL++++ +G +YGR   G 
Sbjct: 61  KPRELADKLTAKLAALPGVAKVDVAGPGFINIALDGSYWPRILAAVLNAGRDYGRTDAGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AV GD LA+L+AF+G++VTREYYINDAGAQ++ LA 
Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVFGDALANLLAFAGWKVTREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL    S +PEG YPG YL  VGK L  KY   +L+  E +WLP V+  ++ 
Sbjct: 181 SAFLRYREALGETIS-IPEGLYPGDYLVPVGKALVAKYGRTMLDRSEAEWLPAVRKAAID 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           AMM +IRDDL ALNI HD+F SE   H    G PS I  ++D L  +  VYEG LPPPK 
Sbjct: 240 AMMAMIRDDLAALNIHHDVFFSERTLHARPDGQPSIIDRLLDELRARNLVYEGRLPPPKG 299

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  + DR+Q LFR+T  GDDVDRPL+KSDG+YTYFAAD+AY K KY+RGF  MI V 
Sbjct: 300 QPIEDWE-DREQTLFRATDFGDDVDRPLMKSDGAYTYFAADIAYHKDKYDRGFKRMIDVW 358

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYVKR++A   A S  +A ++V LC+LVRL R G P+KMSKRAGDF+TLR VVDE
Sbjct: 359 GADHGGYVKRMQAAVKAASGGEASLDVELCQLVRLLRAGEPVKMSKRAGDFVTLREVVDE 418

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+VRFMM+ RKN  +LDFD  KV EQS++NPVFYVQYA+AR  SI R AK+ F DL 
Sbjct: 419 VGRDAVRFMMINRKNDAVLDFDLAKVIEQSRDNPVFYVQYAHARASSILRNAKEAFTDLP 478

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            +             D  E+ LI  +A YPR++E A  A+EP++LAFYLYDLAS  H  W
Sbjct: 479 AEAAAFASAELTLLEDEGEIALIKLIASYPRIVEQAAAAREPHRLAFYLYDLASALHAQW 538

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P LRF+  ++RK T  RL LVHAVA II SGL+I+GV +P EM
Sbjct: 539 NRGKDLPHLRFIIEDDRKSTYARLALVHAVALIIASGLSILGVGAPEEM 587


>gi|240850752|ref|YP_002972152.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267875|gb|ACS51463.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 585

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 305/587 (51%), Positives = 427/587 (72%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  ++  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++ +G+
Sbjct: 1   MNIFKNFEKKIKRSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGI 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ I+  +K D  ++++ +AG GFIN+ L+  + +  + S++ SG  YGR  +G+
Sbjct: 61  NPRALADKIIELLKNDSSIENIDVAGPGFINIKLTKLFWQDAIKSMLESGTSYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRVNVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFTGYNITKEYYINDAGQQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++  +LL   +++ L +VK+ ++ 
Sbjct: 181 SVLLRYREALGQEINEIPEGLYPGEYLIPLGQSLAQEFGDQLLTMDKDEALSLVKERAIH 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALNI HDIF SE   +  +   IR+ I++L   GY+Y+G LPPPK + T
Sbjct: 241 AMMTMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNT 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWE-PSEQTLFRSTNVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S  KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG 
Sbjct: 360 HAGYVKRLEAMAKAISGDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++     +F  
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEALHIKNFS- 478

Query: 480 FPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +I       D  E+ LI  L+EYPR+IE A I +EP++LAFYLYDLAS FH HW+ 
Sbjct: 479 -NDTLIAHLHRLTDDHEILLIRKLSEYPRIIEQAVIHKEPHRLAFYLYDLASSFHTHWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G EN  LRF+Q ++++L+  RL L+ AV +I++SGL IIGVE+P EM
Sbjct: 538 GSENLNLRFIQPDDKELSFARLGLIQAVINILSSGLTIIGVEAPIEM 584


>gi|49474356|ref|YP_032398.1| arginyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81646981|sp|Q6FZH0|SYR_BARQU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49239860|emb|CAF26254.1| Arginyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 585

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 304/588 (51%), Positives = 425/588 (72%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  L+  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++ +GL
Sbjct: 1   MNVFKNFEKKIKKSLELSDIKGKNGEDLNLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I+  +K D  +D + IA  GFIN+ L+ S+ +  + S++  G  YGR  +G+
Sbjct: 61  NPHALAEKIIELLKNDSSIDCIDIAAPGFINIKLTKSFWQDAIKSMLKKGTSYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGPMHVGHCR AV GD L++L+ F GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVFGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++S +LL   +++ L IVK+ ++ 
Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFSDQLLTIDKDEALSIVKERAIY 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALNI HDIF SE   +  +   IR+ I++L   GY+Y+G LPPPK + T
Sbjct: 241 AMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGELPPPKGQNT 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWE-PREQTLFRSTDVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S   A+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG 
Sbjct: 360 HAGYVKRLEAMAKAISGNSAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF--PDLDF 477
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++IF   ++  
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEIFRIENVSN 479

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D     +       D +E+ LI  L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+
Sbjct: 480 DTM---IAHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHAHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G +N  LRF+Q ++++L+  RL L+ A+ +I++SGL I+G+E+  EM
Sbjct: 537 KGSDNFDLRFIQPDDKELSFARLGLIQAIMNILSSGLAIVGIEAATEM 584


>gi|90419380|ref|ZP_01227290.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336317|gb|EAS50058.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 583

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 315/586 (53%), Positives = 411/586 (70%), Gaps = 5/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +FADF SR+K  ++ +    +     L R+ +E PRD AHG L+TNAAM+L++PLGL 
Sbjct: 1   MNIFADFESRVKAAVEAVLSDSENGVPDLARVTVEPPRDAAHGDLATNAAMVLAKPLGLK 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I A +  DPDV++  IAG GFINL L   +    L+ I+ +G ++GR     G
Sbjct: 61  PRDLATRIAAHLARDPDVETAEIAGPGFINLKLRQPFWIAHLAGILAAGGDFGRA-PATG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +VN+E+VSANPTGPMHVGHCR AVVGD +ASLMAF G EVT EYYINDAG Q+N LA S
Sbjct: 120 RRVNVEYVSANPTGPMHVGHCRGAVVGDAVASLMAFGGDEVTTEYYINDAGEQVNVLARS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL     ++P G YPG YLK VG++LA ++   LL   E +WLP+V++ ++ A
Sbjct: 180 ALLRYREALGETIDEIPAGLYPGEYLKPVGEKLASEFGDRLLAMDEAEWLPLVRERAIDA 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR DLK L I+ D+F SE   H  +   I   I +L  +G+VY+G LPPPK +  +
Sbjct: 240 MMAMIRADLKLLGIEQDVFFSERTLHDDNGGKIAAAIADLRERGFVYQGSLPPPKGQLPE 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q L RST VGDD DRPL+KSDG YTYFAAD+AYF  K+ERGF  M+YV+G+DH
Sbjct: 300 DWE-DREQTLLRSTEVGDDQDRPLVKSDGRYTYFAADVAYFHDKFERGFQEMVYVLGADH 358

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRLEAVA AVS   A  +VLLC+LV+LYR+G P+ MSKR+G+F+TL  VV+EVG D
Sbjct: 359 GGYVKRLEAVARAVSGGTATADVLLCQLVKLYRNGEPVTMSKRSGNFVTLADVVEEVGRD 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDL 479
            VRFMML+RK+   LDFDF KV EQSK+NPVFYVQYA+AR  +IFRQA +    L DF  
Sbjct: 419 PVRFMMLFRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARSAAIFRQAVEAGLTLPDFAS 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R  +   +  D  E+ LI  LAE+PR+I++A  A+EP++LAFYLYDLAS FH  ++ G
Sbjct: 479 LDRETLNLLN--DEGEIGLIRKLAEFPRLIKSAADAKEPHRLAFYLYDLASSFHAQYNRG 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV A+  K+T  RL LV AVA ++ +GL +IGV++P EM
Sbjct: 537 KDLPELRFVNADEAKITFARLALVKAVALVLATGLGLIGVDAPEEM 582


>gi|163868520|ref|YP_001609729.1| arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083523|sp|A9IVK4|SYR_BART1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|161018176|emb|CAK01734.1| Arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 585

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/588 (51%), Positives = 427/588 (72%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  ++  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++ +GL
Sbjct: 1   MNIFKNFEKKIKKSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A+ I+  +K D  ++++ +AG GFIN+ L+  + +  +  ++  G+ YGR  +G+
Sbjct: 61  SPRALADKIIELLKNDISIENIDVAGPGFINIKLTKLFWQDAVKYMLELGLSYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFAGYNITKEYYINDAGQQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++  +LL    ++ L IVK+ ++ 
Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQALAQEFGDQLLTMDRDEALSIVKERAIH 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL ALNI HDIF SE   +  +   IR+ I++L   GY+Y+G LPPPK +  
Sbjct: 241 TMMSMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNI 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWE-PSEQTLFRSTNVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S  KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG 
Sbjct: 360 HAGYVKRLEAMAKAISGNKAKLSVFLCQLVKLFRNGQPVRMSKRAGSFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA+++   L  + 
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSVFRQAQEV---LHIES 476

Query: 480 FPRNVIPQ--ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           F  +++        D +E+ LI  L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+
Sbjct: 477 FSNDILITYLHRLIDDNEILLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASCFHTHWN 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G EN  LRF+Q ++++L+  RL L+ AV +I++SGL+IIGVE+P EM
Sbjct: 537 KGSENLNLRFIQPHDKELSFARLGLIQAVINILSSGLSIIGVEAPIEM 584


>gi|92117303|ref|YP_577032.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123265276|sp|Q1QMH5|SYR_NITHX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91800197|gb|ABE62572.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 597

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 307/594 (51%), Positives = 405/594 (68%), Gaps = 16/594 (2%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKIL------DRIVIERPRDCAHGHLSTNAAMILSR 55
           +LFAD  +R+        C   VE+  L       RIV+E PR+ +HG ++TNAAM+L++
Sbjct: 9   HLFADVLARVHAV-----CSALVEEGALPAGLDLSRIVVEPPREASHGDMATNAAMVLAK 63

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
                P  +AE + A+++ D  +D   IAG GFINL L P      L +++  G  YGR+
Sbjct: 64  GAKSKPRDLAEKVAAKLRADGLIDKAEIAGPGFINLTLKPQVWSDALRTVLREGDGYGRS 123

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY VTREYYINDAGAQ++
Sbjct: 124 AIGAGEKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYGVTREYYINDAGAQVD 183

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            LA S + RY++AL  +  ++PEG YPG YLK VG+ LA ++   LL  PE +WLP+ + 
Sbjct: 184 VLARSAYLRYREALGQDIGEIPEGLYPGDYLKPVGQALAAEHGDSLLKAPEAEWLPVARA 243

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            ++  MM++I+ DL ALNIQH++F SE     G    +   ID L  +G VYEG LPPPK
Sbjct: 244 KAIAMMMEMIKGDLAALNIQHEVFFSERSLIEGGSDRVAATIDFLRAKGDVYEGRLPPPK 303

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               +  + DR+Q LFR+T  GDD+DRPL KSDG YTYFA+D+AY K K++RGF NM+ V
Sbjct: 304 GAPVEDYE-DREQTLFRATAYGDDIDRPLKKSDGGYTYFASDIAYHKTKFDRGFLNMVDV 362

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GY+KR++A   AV+  KA ++V + +LV+L R+G P+KMSKR+GDF+TLR VVD
Sbjct: 363 WGADHGGYIKRVQAAIKAVTSGKATLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVD 422

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVGSD+VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A++ FPDL
Sbjct: 423 EVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREAFPDL 482

Query: 476 DFDLFPRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D   R         E   D +EL L+  LA YPR +E A +A EP+++AFYLYDLAS 
Sbjct: 483 PEDASKRAAFLAAAAVERLTDPAELGLLRRLALYPRTVEAAALAHEPHRIAFYLYDLASE 542

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  W+ GR+ P LRF+  N+  +T  RL LV  V S++ SGL ++GV +PNEM
Sbjct: 543 FHALWTKGRDMPHLRFIINNDAVITRARLALVQGVVSVLASGLAVLGVHAPNEM 596


>gi|158424430|ref|YP_001525722.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047969|sp|A8I9L7|SYR_AZOC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158331319|dbj|BAF88804.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 586

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 304/586 (51%), Positives = 411/586 (70%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M ++A F+  ++  +  +  ++     + L RIV+E PRD AHG L+TNAAM+L++ L +
Sbjct: 1   MNVYAIFADHVREAVAALAGELPEAGALDLSRIVVEPPRDAAHGDLATNAAMVLAKDLKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I AR+   P+V  V +AG GFINL L   Y   +L++++ +G ++GR+ +G 
Sbjct: 61  KPRDLAEKIAARLAQVPNVAKVDVAGPGFINLTLDAGYWPGVLAALLRAGTDFGRSDLGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGHCR AV GD LASL+AF+G++VTREYYINDAGAQ++ LA 
Sbjct: 121 GEAVNVEYVSANPTGPMHVGHCRGAVFGDALASLLAFAGFKVTREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A      ++P+G YPG YL  VGK LA+ + SE L  PE +WLPI + +++ 
Sbjct: 181 SAYLRYREAATGETVEIPDGLYPGDYLVPVGKTLAEVHGSEYLESPESEWLPIFRTFAIG 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IRDDL+AL I  D+F SE          +   I+ L R G VYEG LPPPK    
Sbjct: 241 AMMEMIRDDLQALGISFDVFFSERSLTAAGIDRVGLTIEQLRRTGEVYEGRLPPPKGAPI 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST  GDDVDRPL+KSDGSYTYFA D+AY K K++RGF  MI V G+D
Sbjct: 301 EDWE-DREQSLFRSTAHGDDVDRPLVKSDGSYTYFAGDIAYHKDKFDRGFRRMIDVWGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AV+  +A ++V LC+LVRL R+G  ++MSKRAG F+TLR VVDEVG 
Sbjct: 360 HGGYVKRMQAAVKAVTAGQATLDVELCQLVRLLRNGEQVRMSKRAGSFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN   LDFD  KV EQS+ENPVFYVQYA+AR +SI R AK+   DL    
Sbjct: 420 DAVRFMMLFRKNDATLDFDLAKVIEQSRENPVFYVQYAHARAQSILRNAKEQHADLPESG 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P +   D  EL L+  LA +PR++E A  A+EP+++AFYL+++AS FHG W+ G
Sbjct: 480 AIYAHAPLDRLTDEGELGLVKRLAGWPRLVEQAAHAREPHRVAFYLHEVASEFHGQWNRG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRF+  N+R+LTM RL LVH VA+++ SGL ++GVE+ +EM
Sbjct: 540 KDLPHLRFIIENDRELTMARLALVHGVAAVLASGLGLLGVEAVDEM 585


>gi|254469368|ref|ZP_05082773.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961203|gb|EEA96398.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 584

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 303/590 (51%), Positives = 411/590 (69%), Gaps = 12/590 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +FADF+ R+ + +K +D      +  L R+ +E PRD AHG L+TNAAM+L++ L + 
Sbjct: 1   MNIFADFAERVNSVVKGLDLAADAPELDLRRVTVEPPRDAAHGDLATNAAMVLAKQLKMK 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I   ++ D +V++V +AG GFIN+ +S +   +++  +V  G ++G +  G G
Sbjct: 61  PRDLAEKIAEGLRADSEVEAVDVAGPGFINIRVSKTLWERVIGDVVAKGDKFGASARGDG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGH R AVVGD LASL+ F+GY+VTREY INDAG+QI+TLA S
Sbjct: 121 LKVNVEYVSANPTGPMHVGHTRGAVVGDALASLLQFAGYDVTREYVINDAGSQIDTLANS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +   +PEGYYPG YL  VGK LA++Y   L +    + L ++K Y+V  
Sbjct: 181 AFLRYREALGEDIGQIPEGYYPGEYLIPVGKSLAEEYGESLKDMAPAERLALLKGYTVDK 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR DL ALN++HD+F SE   H G  + I   +D L ++  VY G LPPPK +  +
Sbjct: 241 MMDMIRGDLGALNVKHDVFFSEKTMH-GQGNAIDLTLDALRKRDLVYNGTLPPPKGEVPE 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFRS+  GDD DR L+KSDGSYTYFAAD+AY + K ERGF  +I+V+G+DH
Sbjct: 300 DWE-DREQTLFRSSNYGDDSDRALVKSDGSYTYFAADVAYMRDKIERGFKEIIFVLGADH 358

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           +GYVKRLEA+  A+S     + V LC+LV+L++ G   KMSKR+G+FITLR VVDEVG D
Sbjct: 359 AGYVKRLEAIGNAISGGDVDVIVRLCQLVKLFKGGAEFKMSKRSGNFITLRDVVDEVGVD 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN   LDFDF KVKEQSK+NPVFYVQY +ARC S+ RQA +     + D F
Sbjct: 419 AVRFMMLYRKNDAQLDFDFDKVKEQSKDNPVFYVQYGHARCHSVLRQAAE-----ELDWF 473

Query: 481 PRNVIP-QESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                  Q ++F    D  EL LI  +A++PR+++ A    EP+++AFYLY+LAS  HGH
Sbjct: 474 SNTAEELQSADFAQLEDEGELALIAKMAQWPRIVDGAAENHEPHRIAFYLYELASALHGH 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           WS G+E P+LRF+     +LT  RL LV+AV+ +I SGLN++GV +PNEM
Sbjct: 534 WSRGKEKPQLRFINDKTPELTKARLALVYAVSQVIASGLNVLGVTAPNEM 583


>gi|209885394|ref|YP_002289251.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873590|gb|ACI93386.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 597

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 305/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++FAD   R++   + +     + + I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HIFADILGRVQGVCRALIADGTLPEGIDLSRIVVEPPKDASHGDMATNAAMVLAKEAKTK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I A++  DP V SV +AG GFINL L        L +++ +G  YGR+ IG G
Sbjct: 69  PRDLADKIAAKLGADPQVASVSVAGPGFINLTLKNEAWFDALRAVLNTGAAYGRSEIGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+AF+GY+VT+EYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLAFAGYDVTKEYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++P+G YPG YLK VG+ LA +Y  +L+  PE +WLP+V++ ++  
Sbjct: 189 AFLRYREALGEAIGEIPDGLYPGDYLKPVGEALAKEYGDKLVKQPEAEWLPLVREKAIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G    +   I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIVGGTDQVGATIAGLRAKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSDGSYTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDGSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  +  ++V + +LVRL R G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTAGEGTLDVKIVQLVRLLRAGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  S+F+ A+   PDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARVTVPDLPEDNG 487

Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R       P E   D  EL LI  LA +PR +E A  A EP+++AFYLYDLAS FH  W
Sbjct: 488 KRLAFLAGAPVERLTDPVELSLIRQLALFPRTLEAAAAAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T+ RL LV  V S++ SGL ++GV +PNEM
Sbjct: 548 TKGRDAPHLRFIIENDAEMTVARLALVQGVVSVLASGLAVLGVHAPNEM 596


>gi|299134946|ref|ZP_07028137.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298589923|gb|EFI50127.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 597

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD   R+    +++  +  + + I L RIV+E P+D  HG ++TNAAM+L++   + 
Sbjct: 9   HLFADILGRVHGVCRDLMTEGVLPEGIDLSRIVVEPPKDATHGDMATNAAMVLAKEAKVK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ DP V +V +AG GFINL L      + L +++ +G  YGR+ +G G
Sbjct: 69  PRDLADRISDKLRTDPLVLAVSVAGPGFINLTLKNEAWFEALRTVLRTGEGYGRSHVGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+A +GY VT+EYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLASAGYAVTKEYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL     ++PEG YPG YLK VG+ LA +Y  +L+  PE +WLP+V+D S+  
Sbjct: 189 AHLRYREALGETIGEIPEGLYPGDYLKPVGEALAREYGDKLVKQPEAEWLPLVRDKSIGM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G    +   I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIAGGTDQVGATIAGLRAKGDVYEGHLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSD SYTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDNSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  + +++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTAGEGELDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  S+F+ A+   PDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARATVPDLPEDDG 487

Query: 481 PRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R      +E     D  EL LI  LA +PR +E+A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 KRRAYLGSAEVERLNDPVELSLIRQLALFPRTLESAALAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+  +T  RL LV  V S++ SGL ++GV +PNEM
Sbjct: 548 TKGRDAPHLRFIMENDAGITTARLALVQGVVSVLASGLAVLGVHAPNEM 596


>gi|254501189|ref|ZP_05113340.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222437260|gb|EEE43939.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 579

 Score =  612 bits (1577), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 298/564 (52%), Positives = 400/564 (70%), Gaps = 12/564 (2%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L R+V+E PRD AHG  +TNAAM+L++PLG+ P  +AE +V  +  DP++    +AG GF
Sbjct: 20  LSRVVVEAPRDPAHGDFATNAAMVLAKPLGMKPRDLAERLVVELSKDPEITETTVAGPGF 79

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL ++ S  +KIL  I+  G+ YG       +KVN+E+VSANPTGPMHVGH R AVVGD
Sbjct: 80  INLRVAQSVWQKILGRILAEGLGYGGTKTADPSKVNVEYVSANPTGPMHVGHIRGAVVGD 139

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA+L+ F+G EV +EYYINDAG+QI+TLA S F RY++AL  +  ++P G YPG YL  
Sbjct: 140 ALANLLEFAGNEVVKEYYINDAGSQIDTLARSAFLRYREALGEDIGEIPAGLYPGDYLVP 199

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH-R 267
           VG  L D++ S+L +  E  WLP VK+ ++ AM+++IR DL AL ++H++F SE   H R
Sbjct: 200 VGVALKDEFGSDLRDQDEADWLPKVKERAISAMLELIRSDLAALGVEHEVFFSERSLHER 259

Query: 268 GDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            D   S I  ++D L  +G VYEG LPPPK +  +  + DR+Q LFR++  GDD DR L 
Sbjct: 260 SDSNGSKIDHMLDGLRAKGLVYEGTLPPPKGQVPEDWE-DREQTLFRASDYGDDTDRALK 318

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           KSDGSYTYFAAD+AYF+ K++RGF   IYV+G+DH GY KRL+AV  AVS    ++ V  
Sbjct: 319 KSDGSYTYFAADVAYFEDKFKRGFKEAIYVLGADHGGYAKRLQAVGKAVSGGDTEVIVRF 378

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV+L RDG P+KMSKR+GDFITLR VVDEVGSD VRFMML+RKN   LDFDF KV EQ
Sbjct: 379 CQLVKLMRDGAPVKMSKRSGDFITLREVVDEVGSDPVRFMMLFRKNDAPLDFDFKKVTEQ 438

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501
           SK+NPVFYVQY +ARC S+ RQA +     D      + +   +++    DT EL+LI  
Sbjct: 439 SKDNPVFYVQYGHARCCSVLRQAAEELSGQDLG----DSVLASADYSLLDDTGELELIGK 494

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +AE+P+V+E A    EP+++AFYL++LAS  HGHW+ G+E P LRF+ ++N KLT+ R+ 
Sbjct: 495 MAEWPKVVEAAADTHEPHRIAFYLHELASSLHGHWNRGKELPHLRFIDSSNTKLTVARVA 554

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV AV+ +++SGL I+GV++P EM
Sbjct: 555 LVRAVSLVLSSGLAILGVQAPEEM 578


>gi|192291567|ref|YP_001992172.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192285316|gb|ACF01697.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 592

 Score =  612 bits (1577), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 300/589 (50%), Positives = 408/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+      +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 4   HLFARLLSRVHAVCAALIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ +  +D V IAG GFINL L P+   + L +++ +G  YGR+ +G G
Sbjct: 64  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +GY VTREYYINDAGAQ++ LA S
Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYAVTREYYINDAGAQVDVLARS 183

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK VG+ L  +Y + L + PE +WLP V+  ++  
Sbjct: 184 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEYGAALNDMPEAQWLPTVRATAIAM 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+ I+ DL ALNI H++F SE     G  + + + I+ L  +G VY+G LPPPK    +
Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 422

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++ PDL  D  
Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482

Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R  +    P E   D +EL+L+  LA YPR++E A  A EP+++AFYL +LAS FH  W
Sbjct: 483 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +HGR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591


>gi|39935919|ref|NP_948195.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562421|sp|Q6N5W6|SYR_RHOPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|39649773|emb|CAE28295.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 597

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/589 (50%), Positives = 409/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+      +  +  +   I L R+V+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HLFARLLSRVHAVCAALIEEGALPAGIDLSRVVVEPPKDASHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ +  +D V IAG GFINL L P+   + L +++ +G  YGR+ +G G
Sbjct: 69  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK VG+ L  ++ + L + PE +WLP V+  ++  
Sbjct: 189 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEHGAALKDMPEAQWLPTVRATAIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+ I+ DL ALNI H++F SE     G  + + + I+ L  +G VY+G LPPPK    +
Sbjct: 249 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++ PDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 487

Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R  +    P E   D +EL+L+  LA YPR++E A  A EP+++AFYL +LAS FH  W
Sbjct: 488 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +HGR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 548 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 596


>gi|90424008|ref|YP_532378.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|109895028|sp|Q214X7|SYR_RHOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|90106022|gb|ABD88059.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 597

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/594 (51%), Positives = 405/594 (68%), Gaps = 16/594 (2%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+    + +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HLFAVMLSRVHAVCEALAAEGALPAGIDLARIVVEPPKDASHGDMATNAAMVLAKEAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  +++ D  V +V +AG GFINL L P    + L +++  G  YGR+ +G G
Sbjct: 69  PRDLAEKIAEKLRADDLVAAVEVAGPGFINLTLQPKVWSEALRTVLADGAGYGRSAVGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              R ++AL     ++PEG YPG YLK VG+ LA +Y  +LL   E +WLPI +  S+  
Sbjct: 189 ALLRTREALGEEIGEIPEGLYPGDYLKPVGEALAAEYGDKLLAMDEAEWLPIARAKSIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI H+ F SE     GD   +   ID L  +G VYEG LPPPK    +
Sbjct: 249 MMQMIRGDLAALNITHEEFFSERSLIAGDTDRVAATIDFLRGKGDVYEGRLPPPKGAPIE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++RGF NMI V GSDH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGFRNMIDVWGSDH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  +  ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTGGQGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+N VFYVQY +AR  S+FR A+++ PDL     
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVVPDL----- 482

Query: 481 PRNVIPQ---------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           P   + +         E   DT+EL L+  LA YPR++E A +A EP+++AFYLY+LAS 
Sbjct: 483 PEETVARAAFLADAAVERLTDTAELGLLRQLALYPRIVEAAALAHEPHRIAFYLYELASE 542

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  W+ GR+ P LRF+  N+ ++T  RL LV    S++ SGL ++GV +P+EM
Sbjct: 543 FHALWTRGRDLPHLRFIINNDAEITKARLALVQGAVSVLASGLAVLGVHAPDEM 596


>gi|115524697|ref|YP_781608.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518644|gb|ABJ06628.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 597

 Score =  609 bits (1570), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 297/589 (50%), Positives = 405/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA    R+    + ++ +  + + + L R+V+E P+D  HG ++TNAAM+L++     
Sbjct: 9   HLFALMLGRVHAVCRALEGEGALPQNLDLARVVVEPPKDPTHGDMATNAAMVLAKEAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I A+++ D  V SV +AG GFINL L+P      L +++  G  YGR+ +G  
Sbjct: 69  PRDLAEAIAAKLRADDLVASVEVAGPGFINLTLAPKVWADALRTVLAQGARYGRSSVGAK 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 QKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL  +  ++PEG YPG YLK VG+ L  ++   LL  PE +WLP+V+  S+  
Sbjct: 189 ALLRYREALGEDIGEIPEGLYPGDYLKPVGEALKAEHGDRLLALPEAEWLPLVRAKSIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI H+ F SE     G    + + I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNITHEEFFSERSLIEGGSDRVGETIAFLRAKGDVYEGRLPPPKGAPIE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++RG+  M+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGYRTMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV++ K  ++V + +LV+L R+G P+KMSKR+GDF+TLR VV+EVGSD
Sbjct: 368 GGYIKRVQAAIKAVTDGKGDLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVEEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + RFMML+RKN  +LDFD  KV EQSK+N VFYVQY +AR  S+FR A+++ PDL  +  
Sbjct: 428 ATRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVIPDLPEEAA 487

Query: 481 PRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R    Q++      DT+EL L+  LA YPRV+E A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 ARAAFLQDAAVERLTDTAELDLLRRLALYPRVVEAAALAHEPHRVAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+  +T  RL LV    S+I SGL ++GV++P EM
Sbjct: 548 TRGRDLPHLRFIINNDALITKARLALVQGAVSVIASGLAVLGVDAPTEM 596


>gi|85716513|ref|ZP_01047484.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A]
 gi|85696702|gb|EAQ34589.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A]
          Length = 597

 Score =  608 bits (1568), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 302/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD  +R+      +  +  +   + L RIV+E P+D AHG ++TNAAM+L++     
Sbjct: 9   HLFADVLARVHKACAALAEEGALPSGLDLTRIVVEPPKDAAHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV +++ D  +++  IAG GFINL L       +L  ++  G  YGR+ IG G
Sbjct: 69  PRDLAERIVTKLRADDLIENAEIAGPGFINLTLRLPVWFDVLRDVLRDGEGYGRSAIGGG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +  ++P+G YPG YLK VG+ LA ++   L+  PE  WLP+V+  ++  
Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGRALAAEHGDSLVKAPEAGWLPLVRAKAIGM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G+   + + ID L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIEGNADRVAETIDFLREKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  +A ++V + +LV+L R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTSGRATLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++FPDL     
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487

Query: 481 PR----NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R         E   D +EL L+  LA YPR +E A  A EP+++AFYLYDLAS FH  W
Sbjct: 488 ARKQFLGTADMERLSDPAELGLLRRLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHTLW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL LV  V +++ SGL ++GV +P EM
Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596


>gi|86749867|ref|YP_486363.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|109895027|sp|Q2IWF8|SYR_RHOP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86572895|gb|ABD07452.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 597

 Score =  608 bits (1567), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/561 (52%), Positives = 396/561 (70%), Gaps = 5/561 (0%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L RIV+E P+D +HG ++TNAAM+L++     P  +AE I  +++ +  +D+V IAG GF
Sbjct: 37  LSRIVVEPPKDASHGDMATNAAMVLAKDAKAKPRDLAEKIAEKLRAEDQIDTVSIAGPGF 96

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL L P+   + L +++ +G  YGR+ +G   KVNIE+VSANPTGPMHVGHCR AV GD
Sbjct: 97  INLTLKPAVWAEALRAVLDAGAGYGRSRVGGAEKVNIEYVSANPTGPMHVGHCRGAVFGD 156

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA+L+  +GY+VTREYYINDAGAQ++ LA S F RY++AL  +   +PEG YPG YL  
Sbjct: 157 ALANLLETAGYDVTREYYINDAGAQVDVLARSAFLRYREALGEDIGAIPEGLYPGDYLVP 216

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG  L  ++ + L   PE +WLP+V+  S+  MM++I+ DL AL I H++F SE     G
Sbjct: 217 VGTALVAEHGAALKELPEPQWLPMVRAKSIAMMMEMIKADLAALAITHEVFFSERSLIEG 276

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           + + + D ID L  +G VY+G LPPPK    +  + DR+Q LFR+T  GDDVDRPLLKSD
Sbjct: 277 ERNRVADTIDFLRAKGDVYQGRLPPPKGAPVEDYE-DREQTLFRATAYGDDVDRPLLKSD 335

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+YTYFA+D+AY K K++ GF NM+ V G+DH GY+KR++A   AV+  K  ++V + +L
Sbjct: 336 GTYTYFASDIAYHKVKFDAGFGNMVDVWGADHGGYIKRMQAAITAVTSGKGALDVKIVQL 395

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL R+G P+KMSKR+GDF+TLR VVDEVGSD+VRFMML+RKN  +LDFD  KV EQSK+
Sbjct: 396 VRLLRNGEPVKMSKRSGDFVTLREVVDEVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKD 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE----FDTSELQLIVHLAE 504
           NPVFYVQY +AR  SIFR AK++FPDL      R    +++      D SEL L+  LA 
Sbjct: 456 NPVFYVQYGHARGHSIFRNAKELFPDLPDATEARIAFLKDANAERLTDPSELDLLRRLAL 515

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PR +E A +A EP+++AFYLYDLAS FH  W+ GR+ P LRF+  N+ ++T  RL +V 
Sbjct: 516 FPRTVEAAALAHEPHRVAFYLYDLASEFHALWTRGRDLPHLRFIINNDAEITKARLAMVQ 575

Query: 565 AVASIINSGLNIIGVESPNEM 585
            V S++ SGL I+GV +P+EM
Sbjct: 576 GVVSVLASGLAILGVTAPDEM 596


>gi|91977265|ref|YP_569924.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683721|gb|ABE40023.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 597

 Score =  605 bits (1559), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 292/561 (52%), Positives = 395/561 (70%), Gaps = 5/561 (0%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L RIV+E P+D +HG ++TNAAM+L++     P  +A  I  +++ +  +  V IAG GF
Sbjct: 37  LARIVVEPPKDASHGDMATNAAMVLAKDAKAKPRDLANKIAEKLRAEDQIAEVAIAGPGF 96

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL L P+   + L +++  G  YGR+ +G   KVN+E+VSANPTGPMHVGHCR AV GD
Sbjct: 97  INLTLKPAVWAQALRAVLDEGSAYGRSRVGGSEKVNVEYVSANPTGPMHVGHCRGAVFGD 156

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA+L+  +GY+VTREYYINDAGAQ++ LA S F RY++AL  +   +P+G YPG YL  
Sbjct: 157 ALANLLDAAGYDVTREYYINDAGAQVDVLARSAFLRYREALGEDIGAIPDGLYPGDYLVP 216

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG ELA ++ S L   P+ +WLP+V+  S+  MM++I+ DL AL I H++F SE     G
Sbjct: 217 VGAELAAEHGSALKEMPDSQWLPLVRAKSIAMMMEMIKGDLAALAITHEVFFSERSLIEG 276

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D + + D ID L  +G VY+G LPPPK    +  + DR+Q LFR+T  GDDVDRPLLKSD
Sbjct: 277 DRNRVADTIDFLRAKGDVYQGRLPPPKGAPVEDYE-DREQTLFRATAYGDDVDRPLLKSD 335

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GSYTYFA+D+AY K K++ GF NM+ V G+DH GY+KR++A   AV+E K  ++V + +L
Sbjct: 336 GSYTYFASDIAYHKVKFDAGFGNMVDVWGADHGGYIKRMQAAITAVTEGKGALDVKIVQL 395

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL R+G P+KMSKRAGDF+TLR VVDEVGSD+VRFMML+RKN  +LDFD  KV EQSK+
Sbjct: 396 VRLLRNGEPVKMSKRAGDFVTLREVVDEVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKD 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE----FDTSELQLIVHLAE 504
           NPVFYVQY +AR  SIFR A++ FPDL      R    ++++     D +EL L+  LA 
Sbjct: 456 NPVFYVQYGHARGHSIFRNAREAFPDLPESTDARIAFLKDAKTERLTDPAELDLLRRLAL 515

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PR +E A +A EP+++AFYLYDLAS FH  W+ GR+ P LRF+  N+ ++T  RL +V 
Sbjct: 516 FPRTVEAAALAHEPHRVAFYLYDLASEFHALWTRGRDLPHLRFIINNDAEITKARLAMVQ 575

Query: 565 AVASIINSGLNIIGVESPNEM 585
            V S++ SGL ++GV +P+EM
Sbjct: 576 GVVSVLASGLAMLGVTAPDEM 596


>gi|319408659|emb|CBI82314.1| Arginyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 534

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 290/537 (54%), Positives = 396/537 (73%), Gaps = 6/537 (1%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M+L++ +GL+P  +AE I+  +K D  ++ + +AG GFIN+ L+ S+ + +L S++ +GI
Sbjct: 1   MVLAKSVGLNPRILAEKIIELLKNDQSIECINVAGPGFINIKLTRSFWQDVLKSMIEAGI 60

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            YGR+ IG+G +VN+E+VSANPTGPMHVGHCR AV+GD L++L+ F GY VT+EYYINDA
Sbjct: 61  AYGRSQIGQGKRVNVEYVSANPTGPMHVGHCRGAVIGDVLSNLLQFVGYNVTKEYYINDA 120

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G Q+  LA SV  RY+QAL    +++PEG YPG YL  +G+ L  ++  +LL   + + L
Sbjct: 121 GGQVEVLAHSVLLRYRQALGQTINEIPEGLYPGEYLIPLGQSLVQEFGDQLLTIDKSEAL 180

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            IVK+ ++ AMM +IRDDL ALNIQHD+F SE   +  +   IR+ I++L   GY+Y+GI
Sbjct: 181 SIVKERAIDAMMAMIRDDLSALNIQHDVFFSERMLYADNAQAIRNAINDLTLNGYIYKGI 240

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +   +Q LFRST VGDD DR L+KS+GSYTYFAAD+AYF+ K+ R FD
Sbjct: 241 LSPPKGKILEDWE-PHEQTLFRSTDVGDDQDRVLIKSNGSYTYFAADIAYFRDKFNRHFD 299

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIY++G+DH+GYVKRLEAVA A+S  KA++ V LC+LV+L+R+G P++MSKR G F+TL
Sbjct: 300 EMIYILGADHAGYVKRLEAVAKAISGDKAKLAVFLCQLVKLFRNGQPVRMSKREGSFVTL 359

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R VV+EVG D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++
Sbjct: 360 RDVVEEVGCDPVRFMMLYRKCEAPLDFDFTKVTEQSKDNPIFYVQYASARCHSVFRQAQE 419

Query: 471 IFPDLDFDLFPRNV-IPQ-ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               L  D    N+ IP  +   D SE+ LI  LAEYPR+IE A I +EP++LAFYLYDL
Sbjct: 420 ---SLHIDNLSSNIMIPYLDKLIDDSEISLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDL 476

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS FHGHW+ G +NP LRF +  +++L++ RL L+ AV +I++SGL I+G+++  EM
Sbjct: 477 ASNFHGHWNKGNDNPDLRFTKLEDKELSLARLGLIQAVINILSSGLQIVGIKASTEM 533


>gi|316933987|ref|YP_004108969.1| arginyl-tRNa synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601701|gb|ADU44236.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 592

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 297/589 (50%), Positives = 405/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+      +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 4   HLFARLLSRVHAVCAGLIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ +  +D V IAG GFINL L P+   + L +++ +G  YGR+ +G G
Sbjct: 64  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGTGYGRSAVGGG 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +G+ VTREYYINDAGAQ++ LA S
Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGFAVTREYYINDAGAQVDVLARS 183

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK VG  L  ++ + L   PE +WLP V+  ++  
Sbjct: 184 AFLRYREALGEAIGEIPEGLYPGDYLKPVGVALKAEHGAALKELPEAQWLPTVRAKAIAM 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+ I+ DL ALNI H++F SE     G  + + + I+ L  +G VY+G LPPPK    +
Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVG D
Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGFD 422

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++ PDL  D  
Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482

Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R  +    P E   D +EL+L+  LA YPR++E A  A EP+++AFYL +LAS FH  W
Sbjct: 483 ARAAMLRQAPLERLSDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +HGR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591


>gi|75675999|ref|YP_318420.1| arginyl-tRNA synthetase, class Ic [Nitrobacter winogradskyi Nb-255]
 gi|109895011|sp|Q3SRM3|SYR_NITWN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|74420869|gb|ABA05068.1| arginyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 597

 Score =  602 bits (1551), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/589 (50%), Positives = 406/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD  +R+      +  +  +   + L RIV+E PRD +HG ++TNAAM+L++     
Sbjct: 9   HLFADVLARVHRACAALAEEGALPSGLDLARIVVEPPRDASHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV +++ D  ++S  IAG GFINL L       +L  ++  G  YGR+ IG G
Sbjct: 69  PRDLAERIVTKLRADDLIESADIAGPGFINLTLKLPVWADVLRDVLRDGEGYGRSAIGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +  ++P+G YPG YLK VG+ LA  +   L+  PE +WL +V+  ++  
Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGQALAAGHGDSLVKAPEAEWLGLVRAKAIGM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G    + + I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIDGSADRVAETIGFLREKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LV+L R+G P+KMSKRAGDF+TLR VV+EVGSD
Sbjct: 368 GGYIKRVQAAIKAVTSGKGTLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVEEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDL 479
           +VRFMML+RKN  +LDFD  +V EQSK+NPVFYVQY +AR  SIFR A+++FPDL + D 
Sbjct: 428 AVRFMMLFRKNDAVLDFDLARVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487

Query: 480 FPRNVIPQ---ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             R  +     E   D +EL L+  LA YPR +E A  A EP+++AFYLYDLAS FH  W
Sbjct: 488 ERRQFLGTADLERLSDPAELGLLRKLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL LV  V +++ SGL ++GV +P EM
Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596


>gi|218460770|ref|ZP_03500861.1| arginyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 464

 Score =  599 bits (1544), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 286/465 (61%), Positives = 361/465 (77%), Gaps = 4/465 (0%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA SV
Sbjct: 2   KVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLARSV 61

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           F RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE +W+PIVKD ++ AM
Sbjct: 62  FLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEVQWMPIVKDRTISAM 121

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  + 
Sbjct: 122 MVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPED 181

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH 
Sbjct: 182 WE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADHG 240

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG DS
Sbjct: 241 GYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRDS 300

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L  D+  
Sbjct: 301 VRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGL--DVSS 358

Query: 482 RNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            ++    +   D +ELQL+  LAE+PRV+E A  +QEP+++AFYLYDLAS FH HW+ G+
Sbjct: 359 EDLAKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKGK 418

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 419 DQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 463


>gi|148255782|ref|YP_001240367.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166232760|sp|A5EJW7|SYR_BRASB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146407955|gb|ABQ36461.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 598

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/592 (50%), Positives = 407/592 (68%), Gaps = 9/592 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           ++LFAD  +R+      +       + I + R+V+E PRD +HG ++TNAAM+L++    
Sbjct: 8   LHLFADVLARVHAICAALAKDGNWPEGIDVSRVVVEPPRDPSHGDMATNAAMVLAKEAKA 67

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR--NLI 117
            P  +AE I  R++ D  V  V +AG GFINL L P    + L +I+  G  YGR   ++
Sbjct: 68  KPRDLAEAIAERLRADELVAKVDVAGPGFINLTLHPVVWARQLGTILRDGDAYGRIAPVV 127

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G   KVN+E+VSANPTGPMHVGHCR AV GD L SL+ F+G +VTREYYINDAGAQ++ L
Sbjct: 128 G-APKVNVEYVSANPTGPMHVGHCRGAVFGDALCSLLQFAGRDVTREYYINDAGAQVDVL 186

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A S F RY++AL      +PEG YPG YLK VG+ LA ++   L   PE +WLPIV+D +
Sbjct: 187 ARSAFLRYREALGEEIGAIPEGLYPGDYLKPVGQALAAEHGDRLKAMPEAQWLPIVRDKA 246

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  MM  I+DDL ALNI+HD+F SE     G  + + + I+ L  +G VYEG LPPPK  
Sbjct: 247 IAMMMAEIKDDLAALNIRHDVFFSERSLIAGSTNKVAETIEFLRERGDVYEGRLPPPKGA 306

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  + DR+QLLFR+T  GDDVDRPL+KSDGSYTYFA+D+A  + K+ERGF ++I V G
Sbjct: 307 PVEDWE-DREQLLFRATAYGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFG 365

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+KR++A   AV+  +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEV
Sbjct: 366 ADHGGYIKRMQAAVKAVTAAQAVLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEV 425

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+VRFMML+RKN  +LDFD  KV EQS++NPVFYVQY +AR  SIFR A+D FP L  
Sbjct: 426 GRDAVRFMMLYRKNDAVLDFDLAKVIEQSRDNPVFYVQYGHARGHSIFRNARDSFPSLPV 485

Query: 478 DLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +   R    ++++     D SE+ L+  LA YPR +E+A +A EP+++AFYLYDLAS FH
Sbjct: 486 EEGARLAFLRQAKLEKLADPSEIDLLKRLALYPRTVESAALAHEPHRVAFYLYDLASEFH 545

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             W+ GR+ P LRF+  ++ +LTM RL +V  V S++ SGL I+GV +P+ M
Sbjct: 546 ALWTRGRDLPYLRFIIDDDAELTMARLAMVQGVVSVLASGLAILGVNAPDAM 597


>gi|154248165|ref|YP_001419123.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|238686740|sp|A7IN73|SYR_XANP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|154162250|gb|ABS69466.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 586

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/586 (49%), Positives = 396/586 (67%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M ++A F+  ++  +  +  +  + K + L R+V+E PRD +HG L+TNAAM+L++  GL
Sbjct: 1   MNVYAIFADHVREAVAALVAEGIIAKDLDLARVVVEPPRDASHGDLATNAAMVLAKDAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I  ++     V  V +AG GFIN+ L  ++   +L++++  G+++GR+ +G 
Sbjct: 61  KPRELAERIAGKLGTVAGVKKVDVAGPGFINIALDGTFWPVVLAAVLTQGLDFGRSALGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AV GD LA LM F+G+ VT+EYYINDAGAQ++ LA 
Sbjct: 121 GEKVNVEYVSANPTGPMHVGHCRGAVFGDALARLMDFAGFAVTKEYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL     ++PEG YPG YL  VG++LA  +   L    E  WLP+V+  ++ 
Sbjct: 181 SAFLRYREALGEAIGEIPEGLYPGDYLVPVGQKLAAAHGPALKEKSETDWLPLVRAEAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  IR+DL AL I  D+F SE     G    +   I+ L   G VYEG LPPPK    
Sbjct: 241 TMMVAIREDLAALGISFDVFFSERSLSTGAVDRVGAAIEALRASGEVYEGRLPPPKGAPI 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST  GDDVDRPL KSDGSYTYFA D+AY K K +RGF  MI V G+D
Sbjct: 301 EDWE-DREQTLFRSTDFGDDVDRPLKKSDGSYTYFAGDIAYHKDKVDRGFLKMIDVWGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS  +A ++V L +LVRL+R G P++MSKR+G F+TLR VVDEVG 
Sbjct: 360 HGGYVKRMQAAVKAVSGGRATLDVELIQLVRLFRAGEPVRMSKRSGSFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN   LDFD  KV EQS+ENPVFYVQYA+AR +SI R A + F DL    
Sbjct: 420 DAVRFMMLFRKNDAPLDFDLAKVIEQSRENPVFYVQYAHARAKSILRNAAEEFADLPQQA 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P     D  E+ L+  LA +PR++E A  A+EP++++F+L++LAS FHG W+ G
Sbjct: 480 ASFATAPLARLDDEGEITLLRRLASWPRLVEQAAGAREPHRISFFLHELASEFHGQWNRG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRF+  N+R+LT  RL LVH VA+++ SGL ++GV + +EM
Sbjct: 540 KDLPHLRFIIENDRELTSARLALVHGVATVLASGLKVLGVTAVDEM 585


>gi|170740711|ref|YP_001769366.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|254782975|sp|B0UI81|SYR_METS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|168194985|gb|ACA16932.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 586

 Score =  589 bits (1518), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 300/589 (50%), Positives = 403/589 (68%), Gaps = 8/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F  R+   L  +    ++ + + L R+V+E PRD  HG L+TNAA++L++    
Sbjct: 1   MNIFAAFEERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEART 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AEL+ A ++ DP V    +AG GF+NL L+P    +++ + + SG  +GR     
Sbjct: 61  NPKALAELLAAELRQDPRVTEASVAGPGFLNLRLAPEVFAEVVRAALASGEAFGRGARRP 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGH R AV GD LA+L+A SG EV REYYINDAGAQ++ LA 
Sbjct: 121 GL-VNVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL +    +PEG YPG YLK VG+ LA+ +   LL  PE  WLP+V+D+++ 
Sbjct: 180 SAYLRYREALGDAIGAIPEGLYPGDYLKPVGRRLAETHGRALLREPESAWLPVVRDFAIA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKT 298
           AMM +IRDDL AL I+HD+F SE     G        +I  L  +G VY G LPPPK + 
Sbjct: 240 AMMDLIRDDLAALGIRHDVFFSERTLQGGGDGGAVGALIAELREKGLVYVGRLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR Q LFRST  GDD+DRPLLKSDG+YTYFA+D+AY   K  RG  ++I V+G+
Sbjct: 300 PEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKR++A   AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG
Sbjct: 359 DHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVIDEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML+RKN   LDFD  KV EQSK+NPVFYVQYA+AR  S+FRQA++ FP    D
Sbjct: 419 RDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFP--GED 476

Query: 479 LFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           L P+ +   +     D+ E  ++  +A+YPRVIE A  A EP++LAFYLY+LAS FH  W
Sbjct: 477 LSPQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFW 536

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P+LRFV   +RK T+ RL LV A+  ++ SGL I+GV +P+EM
Sbjct: 537 NKGKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDEM 585


>gi|146340981|ref|YP_001206029.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166232761|sp|A4YV78|SYR_BRASO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146193787|emb|CAL77804.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 598

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 298/590 (50%), Positives = 406/590 (68%), Gaps = 7/590 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           YLFAD  +R+      +       + I   R+V+E PRD +HG ++TNAAM+L++     
Sbjct: 9   YLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  R++ D  V  V +AG GFINL L PS   K L++I+  G  YGR     G
Sbjct: 69  PRDLAEQIAERLRADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPG 128

Query: 121 T-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+E+VSANPTGPMHVGHCR AV GD L+SL+ F+G +VTREYYINDAGAQ++ LA 
Sbjct: 129 APKVNVEYVSANPTGPMHVGHCRGAVFGDALSSLLQFAGRDVTREYYINDAGAQVDVLAR 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL  +   +PEG YPG YLK VG+ L  ++  +L   P+ +WLPIV+D ++ 
Sbjct: 189 SAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLPIVRDKAIA 248

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  I+DDL ALNI+HD+F SE     G  + + + ID L  +G VYEG LPPPK    
Sbjct: 249 MMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPV 308

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+QLLFR+T  GDDVDRPL+KSDGSYTYFA+D+A  + K+ERGF ++I V G+D
Sbjct: 309 EDWE-DREQLLFRATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGAD 367

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+KR++A   AV+  +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 368 HGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGR 427

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A++  P+L  + 
Sbjct: 428 DAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESLPELPEEE 487

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             R    +E++     D++E  L+  LA YPR +E+A +A EP+++AFYLY+LAS FH  
Sbjct: 488 GARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHAL 547

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ GR+ P LRF+  ++ +LT  RL +V  V S++ SGL I+GV +P+ M
Sbjct: 548 WTRGRDLPYLRFIIDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAM 597


>gi|182679625|ref|YP_001833771.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|254782941|sp|B2IJG9|SYR_BEII9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|182635508|gb|ACB96282.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 590

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 290/590 (49%), Positives = 393/590 (66%), Gaps = 6/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSR---P 56
           M +F +F +R+   L+ I    ++ + + L R V+E PR+ AHG L+ NAAM+ ++   P
Sbjct: 1   MNIFTEFHARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKP 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I   +  D DV    +AG GFIN+ L P +  ++L + +  G ++GR  
Sbjct: 61  AFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIRLKPEFFGRLLGAALEQGSDFGRPA 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G+ VTREYYINDAGAQ++ 
Sbjct: 121 TAAQEKINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDV 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA S   RY++AL      +PEG YPG YLK VG  LA  +         E+WL I +  
Sbjct: 181 LARSAHLRYREALGETIGAIPEGLYPGDYLKSVGASLAQAHGDTYRGSNGEEWLEIFRLA 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++  MM +IRDDL ALNI H++F SE    R  D   +   I  L  +G VYEG LPPPK
Sbjct: 241 AIDGMMAMIRDDLAALNITHEVFFSERSLTRSEDGDQVAAAIAFLRDRGLVYEGRLPPPK 300

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  + DR+Q+LF+ST  GDDVDRPL KSDG+YTYFA+D+AY K K +RG+  +I V
Sbjct: 301 GQAIEDWE-DREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDV 359

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYVKR+ A   A+SE +  ++V LC+LV+L R G P+KMSKRAGDF+TLR VVD
Sbjct: 360 WGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRAGDFVTLREVVD 419

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+VRFMML+RKN  +L+FD  KV EQSK+NPVFYVQYA+AR +S+FRQA  + PDL
Sbjct: 420 EVGVDAVRFMMLFRKNDAVLEFDLAKVIEQSKDNPVFYVQYAHARVKSVFRQAATLLPDL 479

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D  L            D  E +LI  +A++PRV+E A +A EP+++AFYL+DLAS  H H
Sbjct: 480 DCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAH 539

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G++ P LRF+    R LT+ RL LVH +A ++ SGL+++GV +P+EM
Sbjct: 540 WTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSEM 589


>gi|312114440|ref|YP_004012036.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311219569|gb|ADP70937.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 585

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 288/588 (48%), Positives = 400/588 (68%), Gaps = 7/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +R+++ L ++  + +  E   LD  V+E PR   HG L+TNAAM+L++P   
Sbjct: 1   MNIFQNFETRIRDILLQMQAEGMLPEDAKLDTFVVEPPRQATHGDLATNAAMVLAKPARQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I A++  DPDV+ V IAG GFINL L P+    +L +++  G +YGR  +G 
Sbjct: 61  NPKALAEAIAAKLAHDPDVEKVEIAGPGFINLTLKPAIWGDVLRTVLTQGADYGRGTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGH R AV GD LASL+ F+G++  REYYINDAGAQ++ LA 
Sbjct: 121 GQPVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGFKPAREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +  ++P G YPG YLK VG+ LA ++  + L   E +WLP V++ ++ 
Sbjct: 181 SAHLRYREALGEDIGEIPAGLYPGDYLKPVGEALAKEFG-DTLRGDEAEWLPKVRERTIA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM+ +IRDDL +L I+H++F SE          I + ID L  +G +YEG L PPK K  
Sbjct: 240 AMLDLIRDDLASLGIKHEVFFSERSLTANGEDKIAETIDFLKAKGLIYEGRLAPPKGKLP 299

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFR+T  GDDVDR L KSDGSYTYFAAD+AY K K ERGF  +I V+G+D
Sbjct: 300 DDWE-DREQTLFRATDFGDDVDRALKKSDGSYTYFAADMAYHKTKIERGFKTLINVLGAD 358

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+KRL A   A+S  +AQ++V +C+LVRL+R G P+KMSKRAG F+TLR VVDEVG+
Sbjct: 359 HGGYIKRLTAAVKALSGGEAQVDVKICQLVRLFRGGEPVKMSKRAGSFVTLREVVDEVGA 418

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
             VRF+ML RKN   LDFDF KV EQS +NPVFYVQYA+AR  S+  +A + FPD+  DL
Sbjct: 419 GPVRFIMLTRKNDATLDFDFEKVLEQSNDNPVFYVQYAHARACSVLGKAHEGFPDM--DL 476

Query: 480 FPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            P ++   +     D +E+ +   LAEYPR++E A  A EP+++AFY +++A++FH  W+
Sbjct: 477 SPDSLAKADFSLLVDDAEVAIARKLAEYPRLVEQAAQAHEPHRVAFYAHEIAALFHSLWA 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G+E P LRF+   +  +TM R+ L+   A ++ S L ++GVE+ +EM
Sbjct: 537 RGKELPHLRFMVPASSDITMARMALITGTALVLRSSLKLLGVEAISEM 584


>gi|220922162|ref|YP_002497463.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254782972|sp|B8I9T2|SYR_METNO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219946768|gb|ACL57160.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 590

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 292/591 (49%), Positives = 395/591 (66%), Gaps = 8/591 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F  R+   L  +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFAAFEERIGEALASLTRAGQLPEGLDLGRVVVEPPRDPSHGDLATNAALVLAKEART 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE + A ++ DP V    +AG GF+NL L+P     ++ + + +G  +GR     
Sbjct: 61  NPKALAERLAAELRSDPRVTEASVAGPGFLNLRLAPQVYGDVVRAALRAGEAFGRGAKQP 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGH R AV GD LA+L+  +G EV REYYINDAGAQ++ LA 
Sbjct: 121 GL-VNVEYVSANPTGPMHVGHGRGAVFGDALANLLVAAGREVVREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL      +PEG YPG YLK VG  LA  +   LL  PE +WLP+V++ ++ 
Sbjct: 180 SAFLRYREALGEEIGTIPEGLYPGDYLKPVGAMLAKTHGRSLLGKPEAEWLPLVREAAIG 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-----PIRDIIDNLARQGYVYEGILPPP 294
           AMM+ IR+DL AL I+HD+F SE     G         +  +I+ L  +  VY G LPPP
Sbjct: 240 AMMERIREDLAALGIRHDVFFSERTLQEGGKEGGEGGAVARLIEALRARDLVYVGRLPPP 299

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           K +  +  + DR Q LFRST  GDD+DRPLLKSDGSYTYFA+D+AY   K ERG   +I 
Sbjct: 300 KGQLPEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGSYTYFASDIAYHASKVERGATELID 358

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G+DH GYVKR++A   AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+
Sbjct: 359 VLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVI 418

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DEVG D VRFMML+RKN   LDFD  KV EQSK+NPVFYVQYA+AR  S+FRQA++ FP 
Sbjct: 419 DEVGRDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPG 478

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D               D+ E +++  +A+YPRV+E+A  A EP++LAFYLY+LAS FH 
Sbjct: 479 EDLSAEALAGADLSLLTDSGEAEIMRLIAQYPRVVESAGSAHEPHRLAFYLYELASAFHS 538

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            W+ G++ P+LRFV   +R  T+ RL LV A+  ++ SGL I+GV +P+EM
Sbjct: 539 FWNKGKDLPQLRFVNQTDRMSTLSRLALVAALRGVLASGLGILGVTAPDEM 589


>gi|170749174|ref|YP_001755434.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|254782974|sp|B1M335|SYR_METRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170655696|gb|ACB24751.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 583

 Score =  575 bits (1481), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/590 (47%), Positives = 403/590 (68%), Gaps = 13/590 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R+++ ++ +     + + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFEARVRDAVEALTRAGHLPEGLDLGRVVVEPPRDASHGDLATNAALVLAKEARA 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E + A ++ DP +    +AG GFINL L P+    ++   + +   +GR  +  
Sbjct: 61  NPKALGESLAAELRADPRIVEASVAGPGFINLRLDPAIFHAVVRDALEAPEAFGRARL-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  +N+E+VSANPTGPMHVGH R AV GD L +L+  +G +VTREYYINDAG Q++ LA 
Sbjct: 120 GGPINVEYVSANPTGPMHVGHGRGAVFGDALCNLLVAAGRQVTREYYINDAGVQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL      + EG YPG YLK VG  LA+ +   LL+ PE +WLP V++ ++ 
Sbjct: 180 SAFQRYREAL-GEPFAIAEGLYPGDYLKPVGARLAETHGRALLDKPEAEWLPTVRETALG 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL A+ I+HD+F SE      +   ++ ++  L  +G VYEG LPPPK +  
Sbjct: 239 MMMDMIRADLAAIGIRHDVFFSERTLQ--ESGAVKALLAELRAKGLVYEGRLPPPKGQLP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFR+   GDD DRPLLKSDGSYTYFA+D+AY + KY  G   +I V+G+D
Sbjct: 297 EDWE-DREQTLFRTKEFGDDSDRPLLKSDGSYTYFASDIAYHRAKYLAGATELIDVLGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ KA ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 356 HGGYVKRMQAAVKAVSDGKATLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQYA+AR RS+ RQA++ FPD D  +
Sbjct: 416 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARVRSVQRQAREAFPDADLSV 475

Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                + +E++     D  E++++  +A+YPRV+E+A +A EP+++AF+LY+LAS  H  
Sbjct: 476 ---AALAREADLAVLSDPGEIEMMRLIAQYPRVLESAALAHEPHRIAFHLYELASALHSF 532

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G++ P+LRFV A +RK T  RL LV A+ S + +GL I+GV +P+EM
Sbjct: 533 WNKGKDLPQLRFVNATDRKSTWARLALVEALRSTLAAGLAILGVTAPDEM 582


>gi|296447938|ref|ZP_06889847.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296254575|gb|EFH01693.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 592

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 295/594 (49%), Positives = 402/594 (67%), Gaps = 12/594 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSR---P 56
           M +F+DF + +   L+ I    ++ + +   R V+E P+D AHG L+TN AM+ ++   P
Sbjct: 1   MNIFSDFHAIIAAILERIKASGRLPETLDASRFVVEPPKDAAHGDLATNVAMVFAKEAKP 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I A +  +P+V    +AG GFIN+ L PS    +L S++  G  YGR  
Sbjct: 61  HFPNPRQLAVEIAAALVNEPNVAEAEVAGPGFINIRLKPSVYADVLRSVLAEGDAYGRPH 120

Query: 117 IGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            G+G    ++N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G +VTREYYINDAGAQ
Sbjct: 121 -GRGALAGRINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGADVTREYYINDAGAQ 179

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ LA S F RY++AL     ++PEG YPG YLK  G+ +A  +   LL+ PE +WL  V
Sbjct: 180 VDVLARSAFLRYREAL-GETIEIPEGLYPGDYLKVAGEAIAKAHGRALLDKPEAEWLEPV 238

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGIL 291
           K  ++ AMM++IRDDL AL+I+H++F SE   H      S I   ID L  +G VY+G L
Sbjct: 239 KRAAIDAMMEMIRDDLAALDIRHEVFFSERTLHAKVNGVSQIDKEIDELRARGLVYDGRL 298

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
           PPPK +     + DR+Q LFRST  GDD+DRPL KSDG+ TYFAAD+AY K K +RGF  
Sbjct: 299 PPPKGQLPDDWE-DREQTLFRSTDFGDDIDRPLKKSDGANTYFAADIAYHKSKIDRGFTT 357

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++ V G+DH GYVKR+ A  AA+S  K +++V LC+LV+L R+G P+KMSKR+GDF+TLR
Sbjct: 358 LVDVWGADHGGYVKRMAAAVAALSAGKVELDVKLCQLVKLMRNGEPVKMSKRSGDFVTLR 417

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VVDEVG D+VRFMML+RKN   L+FD  KV EQSK+NPVFYVQYA+AR +S  RQA   
Sbjct: 418 EVVDEVGVDAVRFMMLYRKNDAPLEFDLAKVIEQSKDNPVFYVQYAHARAKSAVRQALAA 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           FPDLD        +P E   D  E+ L   +A +PR++E A  A EP+++AFYL+DLASV
Sbjct: 478 FPDLDVSPAALASVPLELLTDEGEIALAKAIAHFPRLVEQAAAAHEPHRVAFYLHDLASV 537

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH HW+ G++ P+LRFV A++R  T  R+ LV ++  ++ SG  ++GV +P+EM
Sbjct: 538 FHAHWNKGKDRPQLRFVNADDRNSTCARIALVASLTCVLASGSRLLGVSAPDEM 591


>gi|163852810|ref|YP_001640853.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|254782971|sp|A9W7L3|SYR_METEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163664415|gb|ABY31782.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 585

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/589 (47%), Positives = 404/589 (68%), Gaps = 9/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR  +  
Sbjct: 61  NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQM-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL    + +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGMRLAETHGRTLLDQPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476

Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            P  ++         D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W
Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|240140137|ref|YP_002964614.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010111|gb|ACS41337.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 585

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/589 (47%), Positives = 405/589 (68%), Gaps = 9/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E++   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR  +  
Sbjct: 61  NPKALGEVLAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGHM-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL    + +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476

Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            P  ++         D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W
Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|218531636|ref|YP_002422452.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254782970|sp|B7KWG7|SYR_METC4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218523939|gb|ACK84524.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 585

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/589 (47%), Positives = 404/589 (68%), Gaps = 9/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR  +  
Sbjct: 61  NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQM-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL    + +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476

Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            P  ++         D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W
Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|254562575|ref|YP_003069670.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269853|emb|CAX25831.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 585

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/589 (47%), Positives = 403/589 (68%), Gaps = 9/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR  +  
Sbjct: 61  NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQM-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL      +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREAL-GEAITIPEGLYPGDYLKPVGVRLAETHGRALLDRPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476

Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            P  ++         D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W
Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|217976682|ref|YP_002360829.1| arginyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217502058|gb|ACK49467.1| arginyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 598

 Score =  568 bits (1465), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/596 (49%), Positives = 393/596 (65%), Gaps = 18/596 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M ++ADF  R+   L+ I    ++  ++ L+R V+E PRD +HG L+ NAAM+ ++    
Sbjct: 9   MNIYADFHQRIAAILETIVASGRLPAELDLNRFVVEPPRDASHGDLAANAAMVYAKEAKA 68

Query: 60  ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I   +  DPDV S  +AG GFIN+ L P    +IL   +  G ++G+  
Sbjct: 69  SFSNPRQLASEIAFALAEDPDVASAEVAGPGFINISLKPDVFGRILRRALELGADFGKGA 128

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
              G KVN+E+VSANPTGPMHVGH R AV GD LA+L+ F+G +VTREYYINDAGAQ++ 
Sbjct: 129 AKAGGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLEFAGADVTREYYINDAGAQVDV 188

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA S   RY++AL     D+PEG YPG YLK VG  LA ++   L+  PE +W+   +  
Sbjct: 189 LARSAHLRYREALGEEIGDIPEGLYPGDYLKSVGATLAARFGDSLVQRPETEWMEPARAA 248

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPK 295
           +++ MM +IRDDL AL+I H IF SE    RG+    +   I  L   G VYEG LPPPK
Sbjct: 249 AIEGMMAMIRDDLAALDITHAIFFSERSLTRGEAGDQVAAAIAALRADGLVYEGRLPPPK 308

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  + DR+Q LFRST  GDDVDRPLLKSDG YTYFA+D+AY K K +RGF  +I V
Sbjct: 309 GQAAEDWE-DREQTLFRSTAFGDDVDRPLLKSDGGYTYFASDIAYHKTKIDRGFALLIDV 367

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYV R+ A   A+S  KA ++V LC+LV+L R G P+KMSKR+GDF+TLR VVD
Sbjct: 368 WGADHGGYVSRMRAAVEALSRGKASLDVKLCQLVKLMRAGEPVKMSKRSGDFVTLREVVD 427

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-- 473
           EVG D+VRFMML+RKN   L+FD  KV EQSK+NPVFYVQYA+AR RS+ RQA    P  
Sbjct: 428 EVGRDAVRFMMLFRKNDAPLEFDLSKVIEQSKDNPVFYVQYAHARARSVLRQAHVSIPAN 487

Query: 474 DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            L    F      +E+E     D  EL L+  +A++PRVIE A  A EP++LAFYL++LA
Sbjct: 488 KLTTSAF------EEAELGLLVDPGELYLVKLVAQFPRVIEAAASAHEPHRLAFYLHELA 541

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S  HGHW+ G++ P+LRF+      LT+ RL LV  +A ++++GL ++GV +P+EM
Sbjct: 542 SALHGHWTRGKDQPQLRFLNEEMPNLTIARLALVKVLAGVLSAGLGVLGVSAPDEM 597


>gi|46201881|ref|ZP_00054144.2| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 576

 Score =  565 bits (1455), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 273/555 (49%), Positives = 385/555 (69%), Gaps = 5/555 (0%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++  E PR+ AHG ++TNAAM+L++  G+ P  +AE I  R++  P V  V +AG GFIN
Sbjct: 26  KVTAEPPRETAHGDVATNAAMVLTKAAGMKPRDLAEKIAERLRAHPAVTEVEVAGPGFIN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L+ S+  + L+ ++ +G+ YG++ +GKG KVN+E+VSANPTGPMH+GH R AV GD L
Sbjct: 86  LRLADSFWYERLAEVLAAGVTYGQSEMGKGHKVNVEYVSANPTGPMHIGHARGAVFGDAL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ASL+  +GY+VTREYY+NDAG+Q++ LA S F RY++AL     ++PEG YPG YLK  G
Sbjct: 146 ASLLVKAGYDVTREYYVNDAGSQVDVLARSAFLRYREALGEEIGEIPEGLYPGEYLKPAG 205

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + LA K+   L +  EE+WLP ++ ++V AM+ +I+DDL  L ++HD+F+SE     G  
Sbjct: 206 QALAKKHGPALKDKSEEEWLPELRSFAVDAMLDMIKDDLAGLGVRHDVFVSERGLVEG-- 263

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +++ +D L  QG +YEG+L PPK K     +  R Q LF++T  GDDVDRPL KSDGS
Sbjct: 264 GKVQESLDYLNSQGLIYEGVLEPPKGKLPDDWEA-RPQTLFKATGFGDDVDRPLKKSDGS 322

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +TYFA+D+AY + KY RGF +MI V G+DH GYVKR++A   AVS+    ++V LC++V 
Sbjct: 323 WTYFASDIAYHQDKYRRGFASMIDVWGADHGGYVKRMQAAVKAVSQGGGDLDVKLCQMVN 382

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L + G P KMSKRAG F+TLR +V+ VG D VRF+ML RKN   LDFD  KV EQS++NP
Sbjct: 383 LLKGGQPYKMSKRAGTFVTLRDLVEAVGKDVVRFIMLTRKNDAHLDFDLDKVLEQSRDNP 442

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           VFYVQYA+ARC S+ R A  ++P+        +V+ + +  D +EL LI  LA +PR +E
Sbjct: 443 VFYVQYAHARCHSVMRHAAGMWPESVGHTPGVDVLARLT--DPAELGLIRLLAGWPRQVE 500

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  A EP+++AFYLY+LA+ FHG W+ G+++  LRF+   +R++++ RL L+ AV  +I
Sbjct: 501 SAAEAHEPHRVAFYLYELAAAFHGLWNKGKDDTSLRFLIEGDREVSLARLGLLRAVVGVI 560

Query: 571 NSGLNIIGVESPNEM 585
            SGL I GV    EM
Sbjct: 561 ASGLGIFGVTPVEEM 575


>gi|83311628|ref|YP_421892.1| arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|109894999|sp|Q2W492|SYR_MAGMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|82946469|dbj|BAE51333.1| Arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 576

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 275/557 (49%), Positives = 384/557 (68%), Gaps = 9/557 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++  E PR+ +HG ++TNAAM+L++  G+ P  +AE I   ++  P V  V +AG GFIN
Sbjct: 26  KVTAEPPREVSHGDVATNAAMVLTKAAGMKPRDLAEKIAEVLRAHPAVTGVEVAGPGFIN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L+ S+  + L+ ++ +G  YG++ +G+G KVN+E+VSANPTGPMH+GH R AV GD L
Sbjct: 86  LRLADSFWFERLAEVLAAGTAYGQSDLGRGHKVNVEYVSANPTGPMHIGHARGAVFGDAL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ASL+  +GY+VTREYY+NDAG+Q++ LA S F RY++AL     ++PEG YPG YLK  G
Sbjct: 146 ASLLVKAGYDVTREYYVNDAGSQVDVLARSAFLRYREALGEEIGEIPEGLYPGEYLKPAG 205

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-- 268
           + LA K+   L + PEE+WLP ++ ++V AM+ +I+ DL  L ++HD+F+SE    RG  
Sbjct: 206 EALAKKHGPALKDKPEEEWLPELRGFAVDAMLDMIKGDLAGLGVRHDVFVSE----RGLV 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   ++D +D L  +G +YEG+L PPK K     +  R Q LF++T  GDDVDRPL KSD
Sbjct: 262 EAGKVQDALDYLTAKGLIYEGVLEPPKGKLPDDWEA-RPQTLFKATEFGDDVDRPLKKSD 320

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA+D+AY   KY RGF  MI V G+DH GYVKR++A   AVSE    ++V LC++
Sbjct: 321 GSWTYFASDIAYHLDKYRRGFGAMIDVWGADHGGYVKRMQAAVKAVSEGGGDLDVKLCQM 380

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L + G P KMSKRAG F+TLR +V+ VG D VRF+ML RKN   LDFD  KV EQS++
Sbjct: 381 VNLLKGGQPYKMSKRAGTFVTLRDLVEAVGKDVVRFIMLTRKNDAHLDFDLDKVLEQSRD 440

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+ARC S+ R A  ++PD    +    V+   +  D +EL LI  LA +PR+
Sbjct: 441 NPVFYVQYAHARCHSVMRHAAGMWPDAVGPVPGVEVLAHLT--DPAELGLIRLLAGWPRL 498

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E+A  A EP+++AFYLYDLA+ FHG W+ G+++  LRF+  ++R+L++ RL L+ AV  
Sbjct: 499 VESAAEAHEPHRVAFYLYDLAAAFHGLWNKGKDDTSLRFLIEDDRELSLARLGLLRAVVG 558

Query: 569 IINSGLNIIGVESPNEM 585
           +I SGL I GV    EM
Sbjct: 559 VIASGLGIFGVAPVEEM 575


>gi|188582826|ref|YP_001926271.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179346324|gb|ACB81736.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 594

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 286/599 (47%), Positives = 405/599 (67%), Gaps = 20/599 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD AHG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDPAHGDLATNAALVLAKDAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P    +++ + +  G  +GR  +  
Sbjct: 61  NPKALGEALAEALRSDPRIVEASVAGPGFINLRLAPEVFHEVIRAALHDGEAFGRGNM-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL    + +PEG YPG YLK VG+ L   +   LL  PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGEGLKQAHGDALLGKPEHEWLPTVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---------SPIRDIIDNLARQGYVYEGI 290
           AMM +IR+DL A+ I+HD+F SE     G           + + +++D L  +G VYEG 
Sbjct: 239 AMMDMIREDLAAIGIRHDVFFSEATLQGGSGGQGGGQGGSNRVAELLDALRAKGLVYEGR 298

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           LPPPK +  +  + DR+Q LFRST  GDDVDRPLLKSDGSYTYFA+D+AY + K+ RG  
Sbjct: 299 LPPPKGQLPEDWE-DREQTLFRSTQFGDDVDRPLLKSDGSYTYFASDIAYHRDKWLRGAS 357

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I V+G+DH GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TL
Sbjct: 358 ELIDVLGADHGGYVKRMQAAVKAVSDGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTL 417

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R V+DEVG D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++
Sbjct: 418 RDVIDEVGRDAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQARE 477

Query: 471 IFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
             P  DF    R  +  ++E     D  E++++  +A+YPRV+E+A  A EP+++AFYLY
Sbjct: 478 ALPSEDFS---REGLLADAELSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLY 534

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + AS  H  W+ G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +P+EM
Sbjct: 535 ETASSLHSFWNKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPDEM 593


>gi|209964346|ref|YP_002297261.1| arginyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957812|gb|ACI98448.1| arginyl-tRNA synthetase ArgS [Rhodospirillum centenum SW]
          Length = 584

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 272/586 (46%), Positives = 389/586 (66%), Gaps = 4/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F DF +++K  L+E+     + + + L R+ +E PRD +HG +STNAAM+L++P G 
Sbjct: 1   MNVFKDFEAKIKAALEELMADGSLPQGLDLSRVTVEPPRDPSHGDVSTNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P +IAE +VAR++   DV +  +AG GF+NL ++P Y  + LS ++V+G+ YG + +G 
Sbjct: 61  PPRSIAEALVARLRSVADVTAAEVAGPGFVNLRMAPDYWCRRLSDVLVAGVTYGASTMGN 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G++VN+E+VSANPTGP+H  H R AVVGD LA+L+  +G+EVTREYYINDAGAQ+  L  
Sbjct: 121 GSRVNVEYVSANPTGPLHAAHARGAVVGDALAALLEKAGFEVTREYYINDAGAQVEVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A+   ++ +P G YPG YLK VG+ +A +     L  PE +WLP+++D++V 
Sbjct: 181 STYLRYREAVTGEEASIPAGLYPGEYLKEVGQAIARRDGDRWLTAPEAEWLPVMRDFAVG 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +M  I++DL ++NI HD+F SE    +     +   +  L  Q  +Y G+L PPK K  
Sbjct: 241 MIMGWIKEDLASMNIHHDVFTSERALVQS--GAVDAALQTLRDQDLIYVGVLEPPKGKKP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF++T  GDDVDRPL KSDGS+TYFA D+AY   K  RG   +I V G+D
Sbjct: 299 DDWE-PRPQTLFKATQFGDDVDRPLQKSDGSWTYFANDIAYHYDKARRGSPTLIDVWGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR+EA   AV+     ++V +C+LV L  +G P+KMSKRAG F+TLR V++ VG 
Sbjct: 358 HGGYVKRMEAAVKAVTGGAGVLDVKICQLVHLLENGQPVKMSKRAGTFVTLRDVMEAVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF+ML R+N + L+FD+ KV EQSK+NPVFYVQYA+ARCRS+ R A++  PD D   
Sbjct: 418 DVVRFIMLTRRNDQTLEFDYAKVTEQSKDNPVFYVQYAHARCRSVLRHAEEAHPDWDITG 477

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +         E++LI  +  +PR IE A  A EP+++AFYLYDLAS FH  W+ G
Sbjct: 478 PALAGVDLARLSAPEEIELIRQMLSWPRQIEAAAEAHEPHRVAFYLYDLASAFHALWNKG 537

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++  LRF+  ++ +LT  RL LV AV+ +I SGL ++GV    EM
Sbjct: 538 KDDATLRFLIESDPELTKARLALVKAVSIVIASGLQVMGVVPVEEM 583


>gi|300022780|ref|YP_003755391.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524601|gb|ADJ23070.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 586

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 281/588 (47%), Positives = 390/588 (66%), Gaps = 6/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F++  +R++  L+ +  +  +   + L     E PRD +HG ++ NAA++L++    
Sbjct: 1   MNVFSEVEARVRAALEALKTEGVLPSDLALPEFDAEPPRDASHGDIAVNAALVLAKAAKK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A+++   D+  + +AG GF+N+   P     ++  I+  G  YG      
Sbjct: 61  KPRDIADALKAKLEAHGDIQKIEVAGPGFLNITFKPEVWHGLVRDILSEGGRYGAGSSRG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+N+E+VSANPTGPMHVGHCR AV GD LA+L+ F+GY+VTREYYINDAG Q+N LA 
Sbjct: 121 DGKLNVEYVSANPTGPMHVGHCRGAVFGDALANLLVFAGYDVTREYYINDAGGQVNVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +   +PEG YPG YLK VG+ LA ++   L+N PEE+WLPIV+  +++
Sbjct: 181 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGEALAKEHGPSLINMPEERWLPIVRSIAIE 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +I+DDL ALNI+HD+F SE          I+  I  L ++G +YEG L  PK    
Sbjct: 241 KMMAMIKDDLAALNIRHDVFFSEASLQADGKDQIKAAIAELEKKGLIYEGKLEKPKGHDD 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR Q LF+ST  GDD DR L KSDG+YTYFA D+AY   K  RGF ++I V G+D
Sbjct: 301 DDWE-DRVQTLFKSTDFGDDEDRALKKSDGTYTYFAGDVAYHYDKLSRGFRHLINVFGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R++AV AA+S+K A ++V + +LVRL++ G P KMSKRAG F+TLR VVDEVG 
Sbjct: 360 HVGYIPRIKAVVAALSDKTADLDVKVVQLVRLFKAGEPYKMSKRAGTFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--F 477
           D VR+MML+RKN E LDFDF KV EQSK+NPVFYVQYA+AR  S+ R A +  P LD   
Sbjct: 420 DPVRYMMLYRKNQETLDFDFAKVTEQSKDNPVFYVQYAHARSASVLRNAVEQIPGLDVSV 479

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D+  R  +   +  DT E+ LI  LA +PR++E A  A EP+++AFYLYDLAS  H  W+
Sbjct: 480 DVLRRADLSLLT--DTGEIDLIKRLASFPRLVEGAASAHEPHRIAFYLYDLASALHSQWT 537

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G ++P LRF+Q+N+   T  RL L+ A  ++I SGL+++GVE+P+ M
Sbjct: 538 RGNDSPHLRFIQSNDGVATSARLALIAATKTVIKSGLDVLGVEAPDAM 585


>gi|323137650|ref|ZP_08072726.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396947|gb|EFX99472.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 593

 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 302/594 (50%), Positives = 400/594 (67%), Gaps = 11/594 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL- 59
           M +F  F +R+ + L+ I    ++ +  L R V+E P+D + G L+ NAAM+ +R     
Sbjct: 1   MNIFDIFHARIASILEGIKADGRLPEPDLARFVVEPPKDASLGDLACNAAMVFAREAKAH 60

Query: 60  --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             +P  +A  I   +     V +  +AG GFIN+ L P    ++L + ++    YGR   
Sbjct: 61  FANPRELAVEICYALAQSEGVATAEVAGPGFINIRLKPEIFAQVLRAALLDPDNYGRVEK 120

Query: 118 GKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           G+      KVN+E+VSANPTGPMHVGH R AV GD LA+L+AFSG EVTREYYINDAGAQ
Sbjct: 121 GRAGALQGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLAFSGCEVTREYYINDAGAQ 180

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ LA S F RY++AL    + +PEG YPG YLK VG+ LA  +  ELL+ PE +WLP+V
Sbjct: 181 VDVLARSAFLRYREALGETIT-IPEGLYPGDYLKPVGEALAKAHGRELLDRPEGEWLPVV 239

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH--RGDPSPIRDIIDNLARQGYVYEGIL 291
           +  ++ AMM +IRDDL ALNI+H+IF SE   H     PS I   I+ L  +G VYEG L
Sbjct: 240 RREAIDAMMDMIRDDLAALNIRHEIFFSERTLHDRSNGPSKIDAAIEWLREKGLVYEGRL 299

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
           PPPK +     + DR+Q LFRST  GDDVDR L KSDGS TYFA+D+AY K K +RGFD 
Sbjct: 300 PPPKGQLPDDWE-DREQTLFRSTDFGDDVDRALKKSDGSPTYFASDIAYHKDKIDRGFDT 358

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++ V G+DH GYVKR+ A  AA+S +K  ++V LC+LV+L R+G P+KMSKRAGDF+TLR
Sbjct: 359 LVDVWGADHGGYVKRMGAAVAALSGRKVALDVKLCQLVKLMRNGEPVKMSKRAGDFVTLR 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VVDEVG D+VRFMML+RKN   LDFD  KV EQSK+N VFYVQYA+AR +S+ RQA   
Sbjct: 419 EVVDEVGVDAVRFMMLYRKNDAPLDFDLAKVIEQSKDNAVFYVQYAHARAKSVMRQALAA 478

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           FPDLD  +   +    E   D  ELQL   +A+YPR IE A  A EP+++AFYL++L+SV
Sbjct: 479 FPDLDISMAALSGAKFEMLTDEGELQLARVIAQYPRAIEAAAAAHEPHRVAFYLHELSSV 538

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH HW+ G++ P+LRFV +  R LT  R+ LV ++  ++ SGL ++GV +P+EM
Sbjct: 539 FHSHWNKGKDQPQLRFVNSTERDLTSARVALVLSLTVVLGSGLRLLGVSAPDEM 592


>gi|260433438|ref|ZP_05787409.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417266|gb|EEX10525.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 581

 Score =  551 bits (1421), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/588 (46%), Positives = 398/588 (67%), Gaps = 11/588 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D   R+ + L ++  +  + + +  D + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFSDIRGRVLDALTQMQSEGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL L+PS  + +L +++  G +YGR+ +G+
Sbjct: 61  KPRDIAETLAAKLAEDERITSAEVAGPGFLNLRLAPSVWQGVLGAVLEKGTDYGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA 
Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           S + RY++A  N  S ++ EG YPG YL  +G+ L +KY   LL+ PE +WL  V++++ 
Sbjct: 181 SAYERYREA--NGLSPEIAEGLYPGDYLIPIGEALKEKYGDSLLDKPESEWLAEVREFAT 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +AMM +IR DLKAL ++ D+F SE   +      I   ++ L  +G +Y+G+L PPK K 
Sbjct: 239 EAMMDLIRADLKALGVEMDVFFSEKSLY--GTGKIEAALEALNEKGLIYQGVLEPPKGKK 296

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I V G+
Sbjct: 297 PEDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDALIDVFGA 355

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG
Sbjct: 356 DHGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DF 477
            D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +   D+ D 
Sbjct: 416 PDVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIDVSDE 475

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L   ++   +     +EL +   LAE+PR++E A    EP+++AFYLY+LA  FH  W+
Sbjct: 476 TLRGADLAALDH---PAELTVARKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWN 532

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G + P LRF+Q  +   +  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 533 RGNDEPALRFLQDGDVATSQSKIALARAVSVVISAGLGILGVTPAQEM 580


>gi|144899909|emb|CAM76773.1| Arginyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 580

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/587 (48%), Positives = 383/587 (65%), Gaps = 10/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF  F   +   L  +D    ++     ++  E PR+ AHG ++TNAAM+LS+  G  
Sbjct: 1   MNLFKYFRQEIIAALSRLDLPSGLDTS---KVTAEPPREEAHGDVATNAAMVLSKAAGQK 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE + A+++  P V +V IAG GFINL L  S+  + L+ ++ +G  YG + +G  
Sbjct: 58  PRDLAEALAAQLRAHPAVAAVEIAGPGFINLRLVDSFWAERLAEVLQAGAAYGDSDMGGK 117

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + +N+E+VSANPTGPMH+GH R AV+GD LASL+A +GY VTREYYINDAGAQ++ LA S
Sbjct: 118 SPINVEYVSANPTGPMHIGHARGAVIGDALASLLAKAGYAVTREYYINDAGAQVDVLARS 177

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  RY++AL     ++PEG YPG YL+  GK LA  +  +  N PE +WL   + ++V A
Sbjct: 178 IHLRYREALGEEIGEIPEGLYPGDYLQPAGKTLAAIHGDDFKNAPESEWLARFRLFAVDA 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           MM +IRDDL AL ++HD+F SE    RG  +   +   +D LA  G VYEG+L PPK K 
Sbjct: 238 MMDMIRDDLAALGVKHDVFTSE----RGLVESGKVDAALDFLAGLGQVYEGVLEPPKGKV 293

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               +  R Q LFR+T  GDDVDRPL KSDGS+TYFA+D+AY   KY RGF  MI + G+
Sbjct: 294 LDDWE-PRPQTLFRATAFGDDVDRPLKKSDGSWTYFASDIAYHLDKYRRGFPAMIDIWGA 352

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKR++A   AVSE    ++V LC++V L + G P KMSKRAG F+TLR +VD+VG
Sbjct: 353 DHGGYVKRMQAAVKAVSEGGGDLDVKLCQMVNLMKGGQPFKMSKRAGTFVTLRDLVDQVG 412

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF+ML RKN   LDFD  KV EQS++NPVFYVQYA+ARC S+ R      P  D  
Sbjct: 413 KDVVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVLRHGVQALPGADLS 472

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                  P     D +EL +I  LA +PR++E+A  A EP+++AFYL D+A+ FHG W+ 
Sbjct: 473 AAALAAGPLARLTDPAELAVIKLLAGWPRLVESAAEAHEPHRVAFYLNDVAAAFHGLWNK 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G+++ +LRF+   + +L++ R+ LV AVA +I SGL + GVE   EM
Sbjct: 533 GKDDTQLRFLIEGDAELSLARMGLVRAVADVIASGLAVFGVEPVEEM 579


>gi|288960182|ref|YP_003450522.1| arginyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288912490|dbj|BAI73978.1| arginyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 586

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 273/587 (46%), Positives = 382/587 (65%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F + ++  L+E+  +  +   +   R+ +E PR+ +HG LSTNAAMIL++P  +
Sbjct: 1   MNIFKAFETDIRKLLEELAAEGAIPAGLDGSRLTVEPPREASHGDLSTNAAMILAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AEL+VA++K   DV SV IAG GF+NL L P   R  +  ++ +G  +G + +G 
Sbjct: 61  APRALAELLVAKLKGRADVASVEIAGPGFVNLRLMPDVWRDRIRDVLTAGTAFGDSELGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T VN+E+VSANPTGP+H  H R AV GD LASL+  +GY VTREYYINDAGAQ++ LA 
Sbjct: 121 KTPVNVEYVSANPTGPLHAAHGRGAVFGDALASLLRKAGYAVTREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL     ++P G YPG YLK VG+ LA++  +  +   E +WLP  +++++ 
Sbjct: 181 STFIRYREALGEAVGEIPAGLYPGEYLKEVGQALAERDGNRWVGTDEAEWLPACREFAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +M  I++DL  L I  D++ SE          +   +  L  +G +Y G+L PPK K  
Sbjct: 241 MIMGWIKEDLGVLGITMDVYSSERALVAA--GAVNTALAALEERGLIYTGVLEPPKGKKP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF+S+  GDDVDRPL KSDGS+TYFA D+AY   KY RG  ++I V+G+D
Sbjct: 299 DDWE-PRPQTLFKSSEFGDDVDRPLKKSDGSFTYFANDIAYHYDKYRRGAASLIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   A+S   A+++V LC+LV L +DG P+KMSKRAG F+TLR V+D+VG 
Sbjct: 358 HGGYVKRMQAATRAISGGAAELDVKLCQLVHLMQDGQPVKMSKRAGTFVTLRDVIDQVGK 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF+ML R+N + LDFDF KV EQSK+NPVFYVQYA+ARCRS+ R A    P LD   
Sbjct: 418 DVVRFIMLTRRNDQTLDFDFAKVTEQSKDNPVFYVQYAHARCRSVLRHAATALPQLDQTP 477

Query: 480 FPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                    +  D   E+ L   +A +PR++E A  A EP+++AF+LYDLAS FH  W+ 
Sbjct: 478 ASLAASANLARLDAEEEMALAKRMATWPRIVEAAAEAHEPHRIAFFLYDLASDFHALWNR 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           GR++  LRF+   + +LT  RL L+ AVA++I SGL ++GVE   E+
Sbjct: 538 GRDDASLRFLIEGDAELTTARLALIAAVATVIASGLAVMGVEPVEEL 584


>gi|83953782|ref|ZP_00962503.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841727|gb|EAP80896.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 580

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 273/586 (46%), Positives = 389/586 (66%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  S + + L  +     + + +  D I +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP + +  +AG GF+NL LS +  + ++ +++  G ++GR  +G+
Sbjct: 61  KPRDIAEKLAEKLGEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   PEG YPG YL  VG  L DK     ++  E  WL  V++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALKDKVGDAYIDADESVWLEDVRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MMK+IRDDL +L ++ D+F SE   +      I   ID+L  +G +YEG+L PPK K  
Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAIDDLKAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K +RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+SE    +++ L +LV+L+++G   KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKEFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +   D D + 
Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVHSVLRKAAEAGVDTDMET 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R  + Q      +EL+L   LAE+PR++E A  + EP+++AFYLY+LA  FHG W+ G
Sbjct: 477 LQRADLSQLDH--EAELKLAQKLAEWPRMVETAARSNEPHRIAFYLYELAGDFHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++  L+  ++ L  A A +I SGL I+GV+   EM
Sbjct: 535 NDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGILGVKPAEEM 579


>gi|254486265|ref|ZP_05099470.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043134|gb|EEB83772.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 580

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 272/589 (46%), Positives = 389/589 (66%), Gaps = 14/589 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +  +  + + +  D I +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFADIRTLVLSALDALVAEGFLPEGLNFDAIAVEPPRDAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  D  + S  +AG GF+NL L+PS  + I+ +++  G ++GR  +GK
Sbjct: 61  KPREIAERLAVKLVDDARISSADVAGPGFLNLRLAPSVWQGIVGAVLAEGTDFGRGDLGK 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGWDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   P+G YPG YL  VG+ L  K     ++  E  WL  V++++ +
Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIGVGEALKAKVGDAYIDQDESVWLEDVRNFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MMK+IRDDL +L ++ D+F SE   +      I   I++L  +G +YEG+L PPK K  
Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGKIEAAIEDLKSKGLIYEGVLEPPKGKLP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K +RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S     +++ L +LV+L++DG   KMSKRAG F+TLR VVD+VGS
Sbjct: 357 HGGYVKRMKAAVSALSGGTVPLDIKLTQLVKLFKDGKEFKMSKRAGTFVTLRDVVDQVGS 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +     D   
Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVNSVLRKAAEAGVATDLAA 476

Query: 480 FPR---NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                  ++  E     +EL+L   LAE+PR++E A  + EP+++AFYLY+LA  FHG W
Sbjct: 477 LQAADLGLLDHE-----AELKLAAKLAEWPRLVETAARSNEPHRVAFYLYELAGDFHGLW 531

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G + P LRF+Q ++  ++  ++ L  A A +I SGL I+GV    EM
Sbjct: 532 NRGNDVPSLRFLQ-DDAAVSQAKIALAKATAIVIASGLGILGVTPAEEM 579


>gi|126729733|ref|ZP_01745546.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37]
 gi|126709852|gb|EBA08905.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37]
          Length = 580

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/587 (47%), Positives = 386/587 (65%), Gaps = 10/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + +  +  +  +   +  D +  E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFADIRALVLDAITTLVTEGVLPDGLNTDAVTTEPPRDPAHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP V S  +AG GF+NL L PS  + +  +I+  G  YGR+ +GK
Sbjct: 61  KPRDIAEALAVKLADDPRVASAEVAGPGFLNLRLEPSVWQALPKAILGGGTAYGRSDMGK 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVNIE+VSANPTGPMHVGH R A+VGD +ASL+A++GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GEKVNIEYVSANPTGPMHVGHARGAIVGDAMASLLAYAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RYQ+A ++   D PEG YPG YL  VG+ L DK     L  PE+ WLP V++++  
Sbjct: 181 SVYLRYQEA-HDLSVDWPEGSYPGDYLIPVGEALKDKVGDVWLEAPEKVWLPEVREFATA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL AL +  D+F SE   +      I   ID L   G +Y G+LP PK K  
Sbjct: 240 AMMALIRDDLAALGVHMDVFFSEKSLY--GTGRIEAAIDALKEMGLIYWGVLPKPKGKAE 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + +R+Q LF+ST  GDD DRP++K+DGS+ YFA D+AY   K +RGFD +I + G+D
Sbjct: 298 EDWE-EREQWLFKSTDFGDDEDRPVMKADGSWAYFAPDIAYHYDKVQRGFDLLINIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRL+AV  A+S+ +  +++ L +LV+L+++G P KMSKRAG FITLR +VDEVG+
Sbjct: 357 HGGYVKRLKAVVKALSQDRVPLDIKLIQLVKLFKNGAPFKMSKRAGTFITLRDLVDEVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF ML RK+   LDFDF KV EQSKENPVFYVQYA+AR  S+ R+A     D+ D  
Sbjct: 417 DVARFHMLTRKSDATLDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAGAEGIDVSDAT 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L  +++         +EL L   LAE+PR++E A    EP+++A YL +LA+  HG W+ 
Sbjct: 477 LAAQDL---SGMTHPAELHLAAKLAEWPRLVEIAARTHEPHRVATYLGELAADLHGLWNR 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + P LRF+Q ++   T  ++ L  A A +I++GL I+GV    EM
Sbjct: 534 GNDEPALRFLQ-DDPVATQSKIALARATAVVISAGLGILGVTPVEEM 579


>gi|154253462|ref|YP_001414286.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769666|sp|A7HXJ6|SYR_PARL1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|154157412|gb|ABS64629.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 583

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/595 (46%), Positives = 382/595 (64%), Gaps = 23/595 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F  R++  L+ ++ +  +   + L R+ +E PRD +HG LSTNAAM+L++P G+
Sbjct: 1   MNIFRFFEGRVEAALRSLEEEGVLPSGLDLTRVAVEPPRDPSHGDLSTNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +  ++  +  V  V +AG GFINL L+P++ +  +  I+ SG  YG + +G 
Sbjct: 61  KPRELAEQLAVKLGGEEAVTEVDVAGPGFINLRLNPAFWQARIPEILRSGPAYGASDVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGH R AV GD L +L+   GY V REYYINDAG QI  LA 
Sbjct: 121 GEAVNVEYVSANPTGPMHVGHVRGAVFGDALCNLLEKVGYRVCREYYINDAGGQIEVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +   +PEG YPG YLK VG+ L   +   LL   E + L IV++ +V+
Sbjct: 181 SAFLRYREALGEDIGQIPEGLYPGGYLKPVGQALVAAHGRSLLEKDEPEALSIVREAAVE 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L I H+ F SE   HR     +   +  L  +G +Y G L PPK +  
Sbjct: 241 AMMELIRGDLGVLGIVHETFFSELALHRS--GFVEQTLKVLEDKGLIYIGELEPPKGEVP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LFRST  GDD DR L KSDGS+TYFA D+AY   KY RG+  +I V G+D
Sbjct: 299 DDWEA-RPQTLFRSTEFGDDTDRALKKSDGSWTYFAPDIAYHLDKYNRGYRTLIDVWGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           HSGY+KR+ A  A V++  A+ +V +C+LVRL+R+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 358 HSGYIKRMRAAIAGVTDGNAEFDVKICQLVRLFRNGEPVKMSKRSGDFVTLREVVDEVGK 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--------- 470
           D VRFMML RKN   LDFDF KV EQS++NPVFYVQYA AR  S+ R   +         
Sbjct: 418 DVVRFMMLTRKNDAPLDFDFAKVMEQSRDNPVFYVQYANARIHSVLRNVAEEGTYDLSDG 477

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              + DF L            D +E+ L+  +A +PR++E A +A EP+++AFYL DLA+
Sbjct: 478 ALANADFTLLT----------DEAEMALVRLMAGFPRLVEQAALAHEPHRIAFYLDDLAA 527

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FHG W+ G+++  LRF++A++R +T+ RL L+ + A +I +GL I+GVE   EM
Sbjct: 528 AFHGLWNKGKDDHSLRFIRADHRDVTLARLALIRSAAYVIAAGLAILGVEPTEEM 582


>gi|163735841|ref|ZP_02143270.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161390927|gb|EDQ15267.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 580

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/555 (47%), Positives = 378/555 (68%), Gaps = 9/555 (1%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E PRD +HG ++TNAAM+L++P G  P  IAE + A +  DP + S  +AG GF+NL
Sbjct: 33  VTVEPPRDASHGDMATNAAMVLAKPAGKKPREIAEALAACLVADPRITSAEVAGPGFLNL 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            ++P   R +L S++ +G ++GR  +G G KVN+E+VSANPTGP+HVGH R AV GD LA
Sbjct: 93  RIAPDAWRAVLLSVLGAGTDFGRATLGAGQKVNVEYVSANPTGPLHVGHTRGAVFGDALA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           SL+ ++G++VTREYYIND GAQ++ LA SV+ RY +A +  +   P+G YPG YL  VG+
Sbjct: 153 SLLDYAGFDVTREYYINDGGAQVDVLARSVYLRYLEA-HGQEVAFPDGTYPGDYLIPVGQ 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L D      +  PEE WL  ++ ++  AMM +IR DLK+L ++ D+F SE   +     
Sbjct: 212 QLKDLKGDSYVGQPEEAWLQDIRTFATDAMMDLIRADLKSLGVEMDVFYSEKSLY--GTG 269

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I   I++L  +G +Y+G+L PPK K  +  +  R+Q LF+ST  GDDVDRP++KSDGS+
Sbjct: 270 RIEAAIEDLKSKGLIYDGVLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPVMKSDGSW 328

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA D+AY   K  RG+D +I V G+DH GYVKR++A  +A+S+ K  +++ L +LV+L
Sbjct: 329 TYFAPDIAYHYDKVSRGYDALIDVFGADHGGYVKRMKAAVSALSDGKVPLDIKLTQLVKL 388

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +++G P KMSKRAG F+TLR VVD+VG D  RF+ML RKN  +LDFDF KV EQS+ENPV
Sbjct: 389 FKNGEPFKMSKRAGTFVTLRDVVDQVGPDVARFVMLTRKNDAMLDFDFDKVMEQSRENPV 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIE 510
           FYVQYA+AR  S+ R+A+     +D D      +   S  D  +EL LI  L+E+PR++E
Sbjct: 449 FYVQYAHARVASVMRKAEAAGIAVDMDTLKAADL---SLLDHEAELGLIAKLSEWPRLVE 505

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A  + EP+++AFYLY+L+ VFH  W+ G + P LRFVQ ++ K+T  ++ L  A + +I
Sbjct: 506 TAARSNEPHRVAFYLYELSGVFHALWNRGNDVPELRFVQ-DDPKVTQAKIALARACSVVI 564

Query: 571 NSGLNIIGVESPNEM 585
            +GL I+GV    EM
Sbjct: 565 AAGLGILGVTPAQEM 579


>gi|254510090|ref|ZP_05122157.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533801|gb|EEE36789.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 581

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/591 (45%), Positives = 392/591 (66%), Gaps = 17/591 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF++    + + L ++     + + +  D + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFSEIRGLVLDALAQMQSDGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +  ++  D  + S  +AG GF+NL L+PS  + +L++++  G +YGR+ +G+
Sbjct: 61  KPRDIADALAGKLAADDRITSAEVAGPGFLNLRLAPSVWQGVLTAVLAQGTDYGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           S + RY++A  N  S ++ EG YPG YL  +G+ L  KY   L++ PE +WL  +++++ 
Sbjct: 181 SAYERYREA--NGLSPEIAEGLYPGDYLIPIGEALKAKYGDSLIDKPESEWLEDLRNFAT 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR DLKAL ++ D+F SE   +      I   + +L  +G +YEG+L PPK K 
Sbjct: 239 DAMMDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAALQSLTDKGLIYEGVLEPPKGKK 296

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+
Sbjct: 297 PEDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGA 355

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG
Sbjct: 356 DHGGYVKRMKAAVSALSDGKVSLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +     D  
Sbjct: 416 PDVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIAAD-- 473

Query: 479 LFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
               +     ++  T    SEL +   LAE+PR++E A    EP+++AFYLY+LA  FH 
Sbjct: 474 ----DATLAGADLGTIDHASELTVAKKLAEWPRLVEIAARTNEPHRVAFYLYELAGDFHA 529

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            W+ G E  +LRF+Q  +   +  ++ L  +V+ +I++GL I+GV    EM
Sbjct: 530 LWNKGNEETQLRFIQDGDVATSQSKIALARSVSVVISAGLGILGVTPAQEM 580


>gi|332558380|ref|ZP_08412702.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276092|gb|EGJ21407.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 580

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/561 (47%), Positives = 378/561 (67%), Gaps = 15/561 (2%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PRD AHG +STNAAM+L++P G  P TIAE +  R+  DP + S  +AG GF
Sbjct: 30  LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRTIAEALATRLAADPRISSAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L P+  + ++++I+ +G  YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD
Sbjct: 90  LNLRLRPAVWQGMVATILQAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A +  + ++ EG YPG YL  
Sbjct: 150 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG+ L  KY   LL+  E+ WL  V++++ + MM++IR+DL AL ++ D++ SE   +  
Sbjct: 209 VGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   +D L     +YEG+L PPK KT +  +  R+Q LFRST  GDDVDRP+ KSD
Sbjct: 267 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA D+AY   K  RGFD +I + G+DH GYVKR++A  AA+S  +  +++ L +L
Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G P KMSKRAG ++TLR VV++VG+D  RF+ML RKN   LDFDF KV EQSKE
Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504
           NPVFYVQYA AR  S+ R+A++   D+       +     ++ D     +E+ LI  LAE
Sbjct: 446 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 499

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PR++E A    EP+++AFYL++LAS  HG W+ G +   LRF+Q ++  ++  ++ L  
Sbjct: 500 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-DDPVVSQAKIALAR 558

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  +I +GL I+GV    EM
Sbjct: 559 AVGVVICAGLGILGVTPVEEM 579


>gi|294083991|ref|YP_003550748.1| arginyl-tRNa synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663563|gb|ADE38664.1| Arginyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 572

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/586 (45%), Positives = 387/586 (66%), Gaps = 15/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F ++    + ++     + K++ + R+V E PRD  HG L+TNAAM+L++   +
Sbjct: 1   MNIFTYFETQFAALITQLGASGHITKELDISRVVFELPRDPDHGDLATNAAMVLAKSAAM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A L+   +K    VD+V IAG GFINL ++P    + +S I+ +G +YGRN  G+
Sbjct: 61  KPRELAVLLSEELKKIDGVDAVEIAGPGFINLQINPLLWAREISDILTAGYDYGRNNAGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGP+H  H R AV+GD LA LMAFSG++VT+EYY+NDAG Q++ LA 
Sbjct: 121 GANVNIEYVSANPTGPLHAAHARGAVIGDALAGLMAFSGWQVTKEYYVNDAGGQVDILAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +AL  +  ++  G YPG YLK VG +LA KY  +    PE +WL   + +SV 
Sbjct: 181 SVYLRYCEAL-GDTIEIEAGLYPGAYLKDVGTKLAAKYGDKFHKRPEAEWLSTFRLFSVS 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +M+ I+DDL+AL IQ D F SE +    +   ++  ID L   G+VY G+L PPK K  
Sbjct: 240 DIMEGIKDDLQALGIQMDRFSSERELV--ESGAVQKAIDKLKANGHVYTGVLQPPKGKEP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+QLLFRST  GDD DRPL KS+GS+TYFA+D++Y   K ER    +I ++G D
Sbjct: 298 EDWE-PREQLLFRSTEFGDDTDRPLQKSNGSWTYFASDVSYHFDKLERTKGPLIDILGVD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+KR+ A   A+S +K  +++  C+LV L  +G P+KMSKRAG+F+T+R V+D VGS
Sbjct: 357 HGGYLKRMTAAVEAISGQKNMLDIRFCQLVNLMENGKPVKMSKRAGNFVTVRDVIDAVGS 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D +RF+ML R+N + LDFD+ KV EQS++NPVFYVQYA+AR  S+ RQ   +  + D  +
Sbjct: 417 DVIRFIMLTRRNDQTLDFDYAKVTEQSRDNPVFYVQYAHARACSVLRQIGKVPHEADLSV 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +EL ++  LA +P+++E+A  A E +++AF+L DLAS FH  W+ G
Sbjct: 477 LK----------DPAELAVLKMLASWPKLVESAARAHEAHRIAFFLVDLASSFHSLWNAG 526

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RENP LRF+  +N+ +T  RLQLV A + +I +GLN++ +++ +EM
Sbjct: 527 RENPELRFILDDNQTITAARLQLVKATSLVIATGLNVLSIKALDEM 572


>gi|77463500|ref|YP_353004.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|109895030|sp|Q3J281|SYR_RHOS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77387918|gb|ABA79103.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 583

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/561 (47%), Positives = 378/561 (67%), Gaps = 15/561 (2%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PRD AHG +STNAAM+L++P G  P TIAE +  R+  DP + S  +AG GF
Sbjct: 33  LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRTIAEALATRLAADPRISSAEVAGPGF 92

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L P+  + ++++I+ +G  YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD
Sbjct: 93  LNLRLRPAVWQGMVATILQAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 152

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A +  + ++ EG YPG YL  
Sbjct: 153 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 211

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG+ L  KY   LL+  E+ WL  V++++ + MM++IR+DL AL ++ D++ SE   +  
Sbjct: 212 VGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 269

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   +D L     +YEG+L PPK KT +  +  R+Q LFRST  GDDVDRP+ KSD
Sbjct: 270 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 328

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA D+AY   K  RGFD +I + G+DH GYVKR++A  AA+S  +  +++ L +L
Sbjct: 329 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 388

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G P KMSKRAG ++TLR VV++VG+D  RF+ML RKN   LDFDF KV EQSKE
Sbjct: 389 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 448

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504
           NPVFYVQYA AR  S+ R+A++   D+       +     ++ D     +E+ LI  LAE
Sbjct: 449 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 502

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PR++E A    EP+++AFYL++LAS  HG W+ G +   LRF+Q ++  ++  ++ L  
Sbjct: 503 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-DDPVVSQAKIALAR 561

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  +I +GL I+GV    EM
Sbjct: 562 AVGVVICAGLGILGVTPVEEM 582


>gi|310816694|ref|YP_003964658.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755429|gb|ADO43358.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 580

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/557 (47%), Positives = 379/557 (68%), Gaps = 9/557 (1%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D + +E PRD  HG ++TNAAM+L++P G+ P  IA+ + A++ +DP V S  +AG GF+
Sbjct: 31  DNVAVEPPRDAGHGDMATNAAMVLAKPAGVQPRVIADALAAKLVLDPRVASAEVAGPGFL 90

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL LS    + ++ + V+S   +GR+ +G G +VN+E+VSANPTGPMHVGH R AV GD 
Sbjct: 91  NLRLSADIWQGVVKA-VLSDAGFGRSTLGAGKRVNVEYVSANPTGPMHVGHTRGAVFGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LASL+A++GY+VTREYYIND GAQ++ LA S + RY++A +    D+ EG YPG YL  V
Sbjct: 150 LASLLAYAGYDVTREYYINDGGAQVDVLARSAYERYREA-HGQQPDIREGLYPGDYLIEV 208

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           G+ L +KY   LL+  E+ WL  +++++   MM++IR DL  LN++ D+F SE   +   
Sbjct: 209 GQALKEKYGDTLLDKGEQYWLAEIREFATLQMMEMIRGDLAMLNVKMDVFSSEKALY--G 266

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I   I  L  QG +YEG+L PPK K  +  +  R+Q LFRST+ GDDVDRP+ KSDG
Sbjct: 267 TGKIEAAIAKLEEQGLIYEGVLEPPKGKLPEDWE-PREQTLFRSTLHGDDVDRPIKKSDG 325

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            +TYFA D+AY   K +RGFD +I V G+DH GYVKR++A  +A+S     +++ L +LV
Sbjct: 326 QWTYFAPDIAYHYDKVQRGFDLLIDVFGADHGGYVKRMKAAVSALSGGTVPLDIKLIQLV 385

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L+++G P KMSKRAG F+TLR VV++ G+D  RF+ML RKN   LDFDF KV EQSK+N
Sbjct: 386 KLFKNGEPFKMSKRAGTFVTLRDVVEQAGADVTRFVMLTRKNDAPLDFDFDKVLEQSKDN 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           PVFYVQYA+AR  S+ R+A+    D+ D  L   ++     E   +EL+++  LAE+PR+
Sbjct: 446 PVFYVQYAHARVHSVLRRAQAAGLDVSDAALIGADLTRVGHE---AELKVMRQLAEWPRL 502

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           IE A    EP+++AFYLY+LAS FHG W+ G ++  LRF+Q  + + +  ++ L+ AVA 
Sbjct: 503 IEIAARGNEPHRIAFYLYELASDFHGLWNRGNDDTALRFLQEGDAETSQAKIALIRAVAV 562

Query: 569 IINSGLNIIGVESPNEM 585
           +I+ GL I+GV    EM
Sbjct: 563 VISEGLGILGVTPVEEM 579


>gi|126462356|ref|YP_001043470.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166232830|sp|A3PK32|SYR_RHOS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126104020|gb|ABN76698.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 580

 Score =  535 bits (1378), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 268/561 (47%), Positives = 377/561 (67%), Gaps = 15/561 (2%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PRD AHG +STNAAM+L++P G  P  IAE +  R+  DP + S  +AG GF
Sbjct: 30  LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRAIAEALATRLAADPRISSAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L P+  + ++++I+ +G  YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD
Sbjct: 90  LNLRLRPAVWQGMVATILQAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A +  + ++ EG YPG YL  
Sbjct: 150 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG+ L  KY   LL+  E+ WL  V++++ + MM++IR+DL AL ++ D++ SE   +  
Sbjct: 209 VGEALKAKYGDSLLDKGEQHWLKEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   +D L     +YEG+L PPK KT +  +  R+Q LFRST  GDDVDRP+ KSD
Sbjct: 267 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA D+AY   K  RGFD +I + G+DH GYVKR++A  AA+S  +  +++ L +L
Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G P KMSKRAG ++TLR VV++VG+D  RF+ML RKN   LDFDF KV EQSKE
Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504
           NPVFYVQYA AR  S+ R+A++   D+       +     ++ D     +E+ LI  LAE
Sbjct: 446 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 499

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PR++E A    EP+++AFYL++LAS  HG W+ G +   LRF+Q ++  ++  ++ L  
Sbjct: 500 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-DDPVVSQAKIALAR 558

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  +I +GL I+GV    EM
Sbjct: 559 AVGVVICAGLGILGVTPVEEM 579


>gi|221639361|ref|YP_002525623.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782980|sp|B9KSX6|SYR_RHOSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221160142|gb|ACM01122.1| Arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 580

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/561 (47%), Positives = 376/561 (67%), Gaps = 15/561 (2%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PRD AHG +STNAAM+L++P G  P  IAE +  R+  DP + S  +AG GF
Sbjct: 30  LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRAIAEALATRLAADPRISSAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L P+  + ++++I+ +G  YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD
Sbjct: 90  LNLRLRPAVWQGMVATILKAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A +  + ++ EG YPG YL  
Sbjct: 150 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG+ L  KY   LL+  E+ WL  V++++ + MM++IR+DL AL ++ D++ SE   +  
Sbjct: 209 VGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   +D L     +YEG+L PPK KT +  +  R+Q LFRST  GDDVDRP+ KSD
Sbjct: 267 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA D+AY   K  RGFD +I + G+DH GYVKR++A  AA+S  +  +++ L +L
Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G P KMSKRAG ++TLR VV++VG+D  RF+ML RKN   LDFDF KV EQSKE
Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504
           NPVFYVQYA AR  S+ R+A++   D+       +     ++ D     +E+ LI  LAE
Sbjct: 446 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 499

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PR++E A    EP+++AFYL++LAS  HG W+ G +   LRF+Q  +  ++  ++ L  
Sbjct: 500 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-EDPVVSQAKIALAR 558

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  +I +GL I+GV    EM
Sbjct: 559 AVGVVICAGLGILGVTPVEEM 579


>gi|84516347|ref|ZP_01003707.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510043|gb|EAQ06500.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 598

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/586 (47%), Positives = 385/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD   R+   L ++     + + + LD + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 19  MNLFADVRGRVLACLDQMVADGALPQGLALDAVAVEPPRDAAHGDMATNAAMVLAKPAGL 78

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ +  ++  DP + S  +AG GF+N++L P+  + I+ S  +S   +GR+ +G+
Sbjct: 79  NPRAIADALAVKLAADPLIASADVAGPGFLNMHLVPAAWQGIVKS-ALSDKGFGRSRLGQ 137

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++ +E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA 
Sbjct: 138 GQRMLVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 197

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A ++   D PEG YPG YL  VG+ L +K  SE L+  E+ WL  V+ ++  
Sbjct: 198 SVYLRYVEA-HDLTVDWPEGSYPGDYLIPVGEALKEKVGSEYLDQSEDVWLDDVRLFATD 256

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L I+ D F SE   +      I   I  L  +G +Y+G+L  PK KT 
Sbjct: 257 AMMALIRADLAQLGIEMDSFYSEKSLY--GSGLIEKAIAELDAKGLIYQGVLEAPKGKTP 314

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K +RGFD +I V G+D
Sbjct: 315 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGAWTYFAPDIAYHYDKVQRGFDALIDVFGAD 373

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+ K  +++ L +LV+LY++G P KMSKRAG FITLR VVDEVG 
Sbjct: 374 HGGYVKRMKAAVAALSDGKVPLDIKLTQLVKLYQNGAPFKMSKRAGTFITLRDVVDEVGP 433

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR  S+ R+A+D    +D   
Sbjct: 434 DVTRFHMLTRKNDAPLDFDFAKVLEQSKDNPVFYVQYAHARVNSVLRKAQDAGVAVDDAT 493

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        +EL +   +AE+PR++E A    EP+++AFYLYDLAS FH  W+ G
Sbjct: 494 LA--AVDLSGLTHEAELAVARKIAEWPRLVEIAAKGHEPHRIAFYLYDLASDFHALWNRG 551

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  +   T  ++ L+ AVA +I+ GL I+GV    EM
Sbjct: 552 NDDASLRFLQMGDSDTTQAKIALIRAVAIVISHGLGILGVTPAEEM 597


>gi|260575254|ref|ZP_05843254.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022514|gb|EEW25810.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 580

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/587 (46%), Positives = 382/587 (65%), Gaps = 10/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  S +   +  +    ++ + + L  + +E PRD  HG ++TNAAM+L++P GL
Sbjct: 1   MNLFSDIRSLVIASIDAMVAAGELPQGLDLAAVAVEPPRDAGHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP +  V +AG GF+NL L P+  + ++ +++  G +YGR  +G 
Sbjct: 61  APRAIAESLAARLARDPRIAGVEVAGPGFLNLRLQPAVWQGLVGAVLRQGADYGRATLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+EFVSANPTGPMHVGH R AVVGD LA L+AF+G+ VTREYYIND G Q++ LA 
Sbjct: 121 GRRVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAFAGWNVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A      ++ EG YPG YL  VG+ L  KY + LL  PE  WL  ++ +S  
Sbjct: 181 SAYERYREAC-GLSPEIREGLYPGDYLIPVGEALKAKYGTSLLEQPESVWLADLRTFSTD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL AL +  D++ SE   +      I   I+ L   G +YEG L PPK K  
Sbjct: 240 MMMTMIRADLAALGVTMDVYSSEKALY--GTGRIEAAIETLRGMGLIYEGTLEPPKGKEP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R Q LFRST  GDDVDRP++KSDGS+TYFA D+AY   K +RGFD +I + G+D
Sbjct: 298 EDWE-PRLQTLFRSTAHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVQRGFDELIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S  +  +++ L +LV+L+++G P KMSKRAG F+TLR V+D VG+
Sbjct: 357 HGGYVKRMKAAVSALSNGRVPLDIKLVQLVKLWKNGEPFKMSKRAGTFVTLRDVIDLVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A++    + D  
Sbjct: 417 DVTRFVMLTRKNDAALDFDFDKVLEQSKDNPVFYVQYANARINSVLRRAREAGVAVDDAT 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++   + E   +E+ L   +AE+PRV+E A    EP+++AFYLY+LAS  HG W+ 
Sbjct: 477 LAAADLGKLDHE---AEIGLAKKIAEWPRVVEIAARGNEPHRVAFYLYELASDLHGLWNR 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + P+LRFVQ ++  +T  ++ L  A   +I+SGL I+GV    EM
Sbjct: 534 GNDAPQLRFVQ-DDSAITQAKIALARATGVVISSGLAILGVTPVEEM 579


>gi|294676411|ref|YP_003577026.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294475231|gb|ADE84619.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 581

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/586 (45%), Positives = 384/586 (65%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + +   L  +  +  +   +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFADVRAVVLAALDAMVAEGALPAGLDTQAVAVEPPRDAAHGDMATNAAMVLAKPAGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +VA++  D  + S  +AG GFINL L+P     ++ + + +G ++GR+ +G+
Sbjct: 61  NPRALAEGLVAKLAADARIVSAEVAGPGFINLRLAPGLWADVVRAALTAGSDFGRSTLGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GIKVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A    + ++ EG YPG YL  VG+ L +KY + L++ PE  WL  V+ ++ +
Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKEKYGASLIDKPESDWLAEVRVFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L ++ D+F SE   +      I   +  L   G +YEG+L PPK K  
Sbjct: 240 AMMAMIREDLALLGVKMDVFYSEKSLY--GTGQIEAALQRLQDLGLIYEGVLEPPKGKLP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + +R+Q LFRST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I V G+D
Sbjct: 298 EDWE-EREQTLFRSTSYGDDVDRPVKKSDGAWTYFAPDIAYHWTKIERGFDQLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+SE +  +++ L +LV+L+++G P KMSKRAG F+TLR VV++ G+
Sbjct: 357 HGGYVKRMKAAVAALSENRVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
              RF ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR  S+ R+A D+  D+    
Sbjct: 417 GVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYAHARVASVLRKAVDLGIDVTDAA 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                + + +    +E  L   +AE+PR +E A  A EP+++AF+LY++AS  H  W+ G
Sbjct: 477 LAAADLDRNTH--EAERALAKKIAEWPRQVEIAARANEPHRVAFFLYEIASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q  +   +  ++ L  A A +I++GL I+GV    EM
Sbjct: 535 NDEPSLRFLQEGDLAASSAKIALARASAVVISAGLGILGVTPAEEM 580


>gi|85703270|ref|ZP_01034374.1| arginyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85672198|gb|EAQ27055.1| arginyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 581

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   L  +    ++ + + L  + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFTDMRALVVETLAAMQTGGQLPEGLDLANVTVEPPRDAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP ++ V +AG GF+NL LSP   + +  + +  G+ +GR+ +G+
Sbjct: 61  KPREIAEALAARLGDDPRIEHVEVAGPGFLNLQLSPLLWQNVARAALQQGVTFGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+EFVSANPTGP+HVGH R AV GD LASL+ F GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GRRVNVEFVSANPTGPLHVGHTRGAVFGDALASLLDFVGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L  +     +  PE+ WL  ++D++  
Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKAEVGDVYVGQPEDVWLEPIRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL AL ++ D+F SE   +      I   I++L  +G +Y G+L PPK K  
Sbjct: 240 RMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S  +  +++ LC+LV+L+++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +    +D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGMAVDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  +   +    +EL +   +AE+PR++E A    EP+++AFYLYDLAS  H  W+ G
Sbjct: 477 LAQADLSGLTH--EAELNVARKIAEWPRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  +   +  ++ L  AV  +I++GL I+GV    EM
Sbjct: 535 NDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580


>gi|163746495|ref|ZP_02153853.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380380|gb|EDQ04791.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 581

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 272/586 (46%), Positives = 389/586 (66%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA+    +   L+++  +  +   +  D I  E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFAEIRHLIIATLEQMVAQDALPATLNFDPITAEPPRDPAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A+++ DP + S  +AG GFINL L+PS  + +   ++  G ++GR ++G 
Sbjct: 61  KPRDIAEALAAQLQNDPRITSAEVAGPGFINLRLAPSVWQNVARQVLSQGTDFGRAILGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GQRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A    +   P+G YPG YL  +G+ L+  Y  +L++ PE +WL  +++++  
Sbjct: 181 SVYLRYLEA-NGKEVAFPDGTYPGDYLIPLGQALSKMYGDKLVDQPESEWLDDIREFASD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL +L ++ D+F SE   +      I   I +L  +G +YEG+L PPK K  
Sbjct: 240 AMMNLIREDLASLGVEMDVFYSEKSLY--GTGQIEAAIASLEAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDGS+TYFA D+AY   K  R FD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTKHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVSRDFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+    +++ L +LV+LY++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGHVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  SI R+A++    +  D 
Sbjct: 417 DVTRFVMLTRKNDAMLDFDFDKVLEQSRENPVFYVQYAHARVASILRKAQEAGVKV-ADA 475

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R+    + + D +EL L+  LAE+PR++E A  + EP+++AFYLY+LAS FH  +  G
Sbjct: 476 TLRDADLTKLDHD-AELGLLRKLAEWPRLVETAARSNEPHRVAFYLYELASDFHSLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R    LR +Q  +   +  ++ L  AVA +I +GL I+GV    EM
Sbjct: 535 RSEDGLRALQEGDAATSQAKIALSRAVAIVIAAGLGILGVTPAQEM 580


>gi|148556836|ref|YP_001264418.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148502026|gb|ABQ70280.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 576

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 270/589 (45%), Positives = 375/589 (63%), Gaps = 23/589 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           L+A F+ R+   L ++     +    LDR  + +E PRD AHG L+TNAAM+L++P G +
Sbjct: 4   LYASFADRIGAILDDLQASGALPAG-LDRRNVAVEPPRDPAHGDLATNAAMVLAKPAGTN 62

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AELIV ++   P++ S  +AG GFIN+ L+    R  L+ I+ SG +YGR   G+G
Sbjct: 63  PRALAELIVPKLAALPEIASAEVAGPGFINVRLTEQSWRDELAGILSSGGDYGRTATGRG 122

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ F+GY VTREYY+NDAGAQ+ TLA S
Sbjct: 123 TRVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEFAGYAVTREYYVNDAGAQVQTLARS 182

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL     ++PEG+YPG YL  +G+ LA ++    +  PE  WL + ++ +V A
Sbjct: 183 AHLRYREAL-GETIEIPEGFYPGDYLIPIGQALAAEFGDAYVGKPESAWLDLFREKTVAA 241

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR DL  L I+H++F SE    +     +   +D L  +G VYEG L PPK +   
Sbjct: 242 MMDMIRADLALLGIEHEVFASEAAVQKAGKVDV--ALDRLRGEGLVYEGTLEPPKGELPD 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +   +  LF++T  GDD DRP+ KSDG  TYF  DLAY   K E   D +I + G+DH
Sbjct: 300 DWE-PTEMTLFKATAFGDDSDRPVRKSDGGLTYFGTDLAYHAQKAETA-DMLIDIWGADH 357

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           +G VKR++A   A++  K   +V L ++VRL R G P+KMSKR+G F+TL  VV EVG D
Sbjct: 358 AGTVKRIKAAVQALTGGKVAFDVKLVQMVRLLRGGEPVKMSKRSGSFVTLADVVREVGKD 417

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLD 476
            VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR RS+ R+A     D+ P  D
Sbjct: 418 VVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARGRSLHRRAAEAGIDLAPAAD 477

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             L            D  EL L+   A++PR++E A  A EP+++AFYLYDLA++FH  W
Sbjct: 478 LSL-----------LDAEELALVKLAAQFPRIVEGAAQAHEPHRIAFYLYDLAAMFHALW 526

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G ++P  RF+ ++  ++T  RL L  A+  II +GL ++GV +  EM
Sbjct: 527 NRGNDDPARRFLLSDKPEITRARLALSDAIGQIIRNGLGVMGVTAAEEM 575


>gi|163793124|ref|ZP_02187100.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181770|gb|EDP66282.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 585

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 262/586 (44%), Positives = 381/586 (65%), Gaps = 4/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F  +++  L+++  +      +  DR+ +E PRD +HG +STNAAM+L++P+G 
Sbjct: 1   MNVFNQFREKIQAALEDLARRQGWPDGLPFDRVTVEPPRDLSHGDISTNAAMLLAKPVGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA  +   +   P+V+S  +AG GFINL L+ S     +++I+  G  YG +  G+
Sbjct: 61  NPRAIAAPLAEALARLPEVESAEVAGPGFINLRLAASVWLAEVAAILSEGTAYGSSTTGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+H  H R AV GD LA+L+  +G+ VTREYYINDAGAQ+ TLA 
Sbjct: 121 GRRVNVEYVSANPTGPLHAAHARGAVFGDALAALLKKAGFTVTREYYINDAGAQVETLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +   +PEG+YPG YLK VG+ +A+      +  PE +WL + +  +V+
Sbjct: 181 STHLRYREALGEDIGAIPEGHYPGEYLKDVGQAIAESDGDRWVGKPESEWLEVFRARAVE 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  ++ DL A+ IQ D F SE      +   ++   D L  +G VY G+L PPK KT 
Sbjct: 241 LMMTEVKRDLLAMGIQFDTFSSERALV--EAGAVQRAFDTLDGRGLVYTGVLEPPKGKTP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R QLLF+++  GDDVDRPL KSDGS+TYFA D+AY   K+ RG   +I V+G+D
Sbjct: 299 DDWE-PRPQLLFKASEFGDDVDRPLKKSDGSWTYFANDIAYHLDKFLRGSPELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   A+S  +  ++V LC+LV L+  G P++MSKRAG F+TLR V+D VGS
Sbjct: 358 HGGYVKRMKAAVTAISGGEGSLDVKLCQLVHLFDGGKPVRMSKRAGTFVTLRDVIDSVGS 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRF+ML R+N + L+FD+ KV+EQS++NPVFYVQYA+AR  S+ R A +  P  D   
Sbjct: 418 DSVRFIMLTRRNDQTLEFDYQKVQEQSRDNPVFYVQYAHARATSVIRHAGEALPGHDLSD 477

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   S  D  EL LI  LA +PR++E+A  A EP+++AFYL ++A+ FH  W+ G
Sbjct: 478 AALAKVSLGSLTDPDELGLIRLLAGWPRLVESAADAHEPHRVAFYLGEVAAAFHSLWNKG 537

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++   LRF+  ++   T+ R+ LV A A++I SGL ++GV+   E+
Sbjct: 538 KDEAHLRFILPDDTATTLARMALVRATATVIASGLGVMGVQPVEEL 583


>gi|110680351|ref|YP_683358.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123361735|sp|Q164C1|SYR_ROSDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109456467|gb|ABG32672.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 580

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/557 (47%), Positives = 377/557 (67%), Gaps = 7/557 (1%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +  + +E PRD AHG ++TNAAM+L++P G  P  IAE +   +  D  + S  +AG GF
Sbjct: 30  MTNVTVEPPRDAAHGDMATNAAMVLAKPAGKKPRDIAEALAQLLAADARIASAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL ++P+  R +L S++  G ++GR  IG G KVN+E+VSANPTGP+HVGH R AV GD
Sbjct: 90  LNLRIAPTAWRAVLLSVLDKGTDFGRADIGAGQKVNVEYVSANPTGPLHVGHTRGAVFGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LASL+ ++G++VTREYYIND GAQ++ LA SV+ RY +A +  +   P+G YPG YL  
Sbjct: 150 ALASLLDYAGFDVTREYYINDGGAQVDVLARSVYLRYLEA-HGQEVAFPDGTYPGDYLIP 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG++L D      +  PEE WL  ++ ++  AMM +IR DLK+L ++ D+F SE   +  
Sbjct: 209 VGQQLKDLKGDSYVGQPEEAWLQDIRTFATDAMMDLIRADLKSLGVEMDVFYSEKSLY-- 266

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   I++L  +G +Y+G+L PPK K  +  +  R+Q LF+ST  GDDVDRP++KSD
Sbjct: 267 GTGRIEAAIEDLKSKGLIYDGVLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPVMKSD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA D+AY   K  RG+D +I V G+DH GYVKR++A  +A+S+ K  +++ L +L
Sbjct: 326 GSWTYFAPDIAYHYDKVSRGYDALIDVFGADHGGYVKRMKAAVSALSDGKVPLDIKLTQL 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G P KMSKRAG F+TLR VVD+VG D  RF+ML RKN  +LDFDF KV EQS+E
Sbjct: 386 VKLFKNGEPFKMSKRAGTFVTLRDVVDQVGPDVARFVMLTRKNDAMLDFDFDKVMEQSRE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR  S+ R+A+     +D D      +   +    +EL LI  L+E+PR+
Sbjct: 446 NPVFYVQYAHARVASVMRKAEAAGIAVDMDTLKAADLSLLNH--EAELGLIAKLSEWPRL 503

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E A  + EP+++AFYLY+L+ VFHG W+ G + P LRFVQ ++ K+T  ++ L  A + 
Sbjct: 504 VETAARSNEPHRVAFYLYELSGVFHGLWNRGNDVPELRFVQ-DDPKVTQAKIALARACSV 562

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL I+GV    EM
Sbjct: 563 VIAAGLGILGVTPAQEM 579


>gi|84500943|ref|ZP_00999178.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391010|gb|EAQ03428.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 581

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 271/586 (46%), Positives = 378/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +  +  +   +    + +E PRD  HG ++TNAAM+L++P GL
Sbjct: 1   MNLFADIRATVLDSLAAMQQEGDLPGGLDFANVTVEPPRDPGHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  R+  D  + S  +AG GF+NL L P+    I+ +++ SG +YGR+ +G+
Sbjct: 61  KPRDIAEALADRLAADDRITSAEVAGPGFLNLRLDPAVWADIVRTVLQSGPQYGRSAMGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A + ++     G YPG YL  VG+ L  K     ++ PEE WL  V++ + +
Sbjct: 181 SVYLRYLEA-HGHEVTFEGGTYPGDYLISVGEALKSKVGDAYVDQPEEVWLDDVREMATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L +Q D F SE   +      I   ID+L+ +G +Y+G L PPK K  
Sbjct: 240 AMMELIRVDLGLLGVQMDHFFSEKALY--GTGRIEAAIDSLSDKGLIYQGTLEPPKGKVP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTEHGDDVDRPIRKSDGSWTYFAPDIAYHYDKISRGYDLLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG P KMSKRAG FITLR VV+EVG 
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPVDIKLCQLVKLFKDGEPFKMSKRAGTFITLRDVVEEVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +    +  D 
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARIASVLRKAGEA--GIAHDD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +E  +   L E+PR++E A    EP+++AFYLY+LA   H  W+ G
Sbjct: 475 ATLAAADLSGMTDEAEQSVAKKLTEWPRLVEIAARTNEPHRVAFYLYELAGDLHTLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+   +  L+  +L L  AVA +I++GL I+GV    E+
Sbjct: 535 NDKPELRFLHEGDAALSQSKLALARAVAVVISAGLAILGVTPAEEL 580


>gi|149914960|ref|ZP_01903489.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811148|gb|EDM70985.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 581

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/587 (46%), Positives = 379/587 (64%), Gaps = 9/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +    +   L  +  + K+ + +    + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFTEIHGLVLAELGRLQAEGKLPEALDFANVAVEPPRDPAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  D  ++S  +AG GF+NL LS      ++ + +  G  +GR+ +G 
Sbjct: 61  QPRAIAEDLAARLLEDDRIESADVAGPGFLNLRLSSGMWHAVVRAALQDGEAFGRSAMGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ + GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYVGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L  +  +  ++ PE+ WL  V+ ++  
Sbjct: 181 SVYLRYLEA-HGQAVAFEDGTYPGDYLIEVGEALKAEVGAAYVDQPEDVWLAEVRSFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IRDDLK+L ++ D+F SE   +      I   + +L  +G +YEG+L PPK KT 
Sbjct: 240 RMMDLIRDDLKSLGVEMDVFFSEKSLY--GTGLIEKALKSLEDRGLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTDYGDDVDRPVKKSDGSWTYFAPDIAYHYDKITRGFDKLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   A+S+ +  +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVGALSDNRVPLDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A++   D+ D  
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAREAGIDVEDAT 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++     E    EL +   LAE+PR+ E A    EP+++AFYLYDLAS  H  W+ 
Sbjct: 477 LAKADLSGLVHEV---ELAVARKLAEWPRMAELAGRTHEPHRVAFYLYDLASDLHALWNR 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + P LRF+Q +N   +  ++ L  +V  +I+SGL I+GV    EM
Sbjct: 534 GNDEPALRFLQEDNPATSQAKIALARSVTVVISSGLGILGVTPAEEM 580


>gi|83952167|ref|ZP_00960899.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837173|gb|EAP76470.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 581

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/560 (46%), Positives = 370/560 (66%), Gaps = 12/560 (2%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PRD  HG ++TNAAM+L++P GL P  IAE + AR+  DP + S  +AG GF
Sbjct: 30  LSNVAVEPPRDPLHGDMATNAAMVLAKPAGLKPRDIAEDLAARLADDPRIASAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L+P    ++L +++ +G ++GR+ +G+G KVN+E+VSANPTGP+HVGH R AV GD
Sbjct: 90  LNLRLAPGQWHEVLRAVLAAGPDFGRSTMGQGRKVNVEYVSANPTGPLHVGHTRGAVFGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LASL+ F+G+EVTREYYIND GAQ++ LA SV+ RY +A +  +    +G YPG YL  
Sbjct: 150 ALASLLDFTGHEVTREYYINDGGAQVDVLARSVYLRYLEA-HGQEVAFEDGTYPGDYLIP 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG+ L  +     +  PEE WL  V++++ + MM +IR+DLK+L ++ D F SE   +  
Sbjct: 209 VGEALKSEVGDAYVGQPEEVWLEKVREFATEKMMGLIREDLKSLGVEMDEFYSEKSLY-- 266

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   +  L  +G +YEG+L PPK K  +  +  R+Q LF+ST  GDDVDRP+ KSD
Sbjct: 267 GTGRIEAALAELESKGLIYEGVLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPVKKSD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G++TYFA D+AY   K  RGFD +I V G+DH GYVKR++A  +A+S+ +  +++ LC+L
Sbjct: 326 GAWTYFAPDIAYHYDKVSRGFDALIDVFGADHGGYVKRMKAAVSALSDGRVPLDIKLCQL 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+LY++G P KMSKRAG F+TLR VVD VG+D  RF ML RKN   LDFDF KV EQSK+
Sbjct: 386 VKLYKNGEPFKMSKRAGTFVTLRDVVDMVGADVTRFHMLTRKNDAPLDFDFDKVVEQSKD 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFDTSELQLIVHLAEY 505
           NPVFYVQYA AR  S+ R+A +     D     +   +++  E     +EL L   +AE+
Sbjct: 446 NPVFYVQYANARVSSVLRKAAEAGIAADDATLAKADLSILSHE-----AELTLARKIAEW 500

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           PR++E A    EP+++AFYLYDLAS  H  W+ G + P LRF+Q  +   +  ++ L  A
Sbjct: 501 PRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRGHDEPGLRFLQEGDAATSQAKIALARA 560

Query: 566 VASIINSGLNIIGVESPNEM 585
              +I++GL I+GV    EM
Sbjct: 561 ATVVISAGLGILGVTPVEEM 580


>gi|159044277|ref|YP_001533071.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912037|gb|ABV93470.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 581

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/587 (45%), Positives = 382/587 (65%), Gaps = 9/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   L E+  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRAGVLAALTEMQAEGTLPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP V S  +AG GF+NL L+P+  + ++ +++ +G  +GR+ +G+
Sbjct: 61  KPRDIAEALAGKLAADPRVASAEVAGPGFLNLRLAPTLWQDVVRAVLTTGTGFGRSSMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GRRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L DK     ++  E+ WL  V+D++  
Sbjct: 181 SVYLRYLEA-HGQQVAFEDGTYPGDYLIAVGEALKDKVGDAFVDKGEQFWLAEVRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL +L ++ D F SE   +      I   I +L  +G +Y G L PPK K  
Sbjct: 240 AMMDLIRADLASLGVKMDRFFSEKSLY--GTGRIEAAIADLDAKGLIYRGTLEPPKGKVP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPIKKSDGSWTYFAPDIAYHYDKVNRGYDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LVRL+++G P KMSKRAG F+TL  VV++VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLTQLVRLFKNGEPFKMSKRAGTFVTLSDVVEQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFD 478
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +   P  D +
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVCSVLRKAAEAGVPVDDAN 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++       D +EL+L   LAE+PR++E A    EP++++F LYD+A+  H  W+ 
Sbjct: 477 LAQADL---SGMTDPAELKLARALAEWPRLVEIAARTNEPHRISFALYDIAADLHALWNK 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++P LRF+Q  +   T  ++ LV A A +I++GL I+GV    EM
Sbjct: 534 GNDDPSLRFLQEGDSAATQAKIALVRACAVVISTGLGILGVSPVEEM 580


>gi|114771796|ref|ZP_01449189.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114547612|gb|EAU50503.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 576

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/586 (45%), Positives = 381/586 (65%), Gaps = 12/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  + +   L+ +     + K++    + +E PRD +HG +STNAAM+L++P G+
Sbjct: 1   MNLFSDIRNLVLASLEILQSNGTLPKELNFSNVTVEPPRDASHGDMSTNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ +   +  D  V S  +AG GF+NL L   Y   I+  ++  G  YGR  IG 
Sbjct: 61  NPRLIADALSLLLVNDERVISADVAGPGFLNLCLKQDYWTSIIPFVLNMGTNYGRATIGT 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GIKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A      +  +G YPG YL  +G +L +KY   L++ PE +W+  ++ ++ +
Sbjct: 181 SVYLRYLEA-NGQAVEFVDGTYPGDYLVELGVDLKNKYGDSLVDKPETEWIAELRLFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL  L I+ D+F SE   +      I   + +L  +G VY+G+L PPK K  
Sbjct: 240 KMMDLIRSDLALLGIRMDVFFSEKSLY--GTGLIEAALADLDGKGLVYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDGS+TYFA D+AY   K +RGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPIAKSDGSWTYFAPDIAYHFDKVQRGFDQLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S ++  +++ L +LV+LY++G P KMSKRAG F+TLR VV++VG 
Sbjct: 357 HGGYVKRMKAAVSALSNQQVSLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVEQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV+EQSK+NPVFYVQYA+AR  S+  +AKD    +D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFAKVQEQSKDNPVFYVQYAHARISSVLSKAKDANMKIDVKT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           F     P       SE+ +I  LAE+PR++E A    EP+++AFYLY+LA  FH  W+ G
Sbjct: 477 FKSLKHP-------SEITVIKKLAEWPRLLELAAKHNEPHRVAFYLYELAGDFHALWNIG 529

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +E P  RF+Q +N +L+  +L +V AV   I +GL I+GV   +EM
Sbjct: 530 KEAPETRFLQEDNPELSAEKLSMVSAVQLTIAAGLTILGVAPIDEM 575


>gi|149202735|ref|ZP_01879707.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144017|gb|EDM32051.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 581

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 265/587 (45%), Positives = 377/587 (64%), Gaps = 9/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D    +   L  +    ++   + +  + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFTDMRDLVLETLAAMQAGGQLPAGLDMTSVTVEPPRDAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + AR+  D  V+S  +AG GF+NL L P+  +++  + +  G  YGR+ +G 
Sbjct: 61  KPREIADALAARLAEDGRVESAEVAGPGFLNLRLVPAVWQRVARAALTEGTGYGRSTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LA L+ + GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALARLLDYVGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L  +     +  PEE WL  ++D++  
Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKVQVGDAYVGQPEEVWLEPIRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL AL ++ D+F SE   +      I   I++L  +G +Y G+L PPK K  
Sbjct: 240 KMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S  +  +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +    + D  
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGIAVEDAT 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++     E   +EL +   +AE+PR++E A  + EP+++AFYLYDLAS  H  W+ 
Sbjct: 477 LAQADLSGLTHE---AELAVARKIAEWPRLVEIAGRSNEPHRVAFYLYDLASDLHALWNR 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++  LRF+Q  +   +  ++ L  AV  +I++GL I+GV    EM
Sbjct: 534 GNDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580


>gi|146276951|ref|YP_001167110.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166232831|sp|A4WQZ1|SYR_RHOS5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145555192|gb|ABP69805.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 580

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/557 (47%), Positives = 374/557 (67%), Gaps = 7/557 (1%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PRD AHG ++TNAAM+L++P G  P  IAE +  R+  DP + S  +AG GF
Sbjct: 30  LSAVAVEPPRDPAHGDMATNAAMVLAKPAGKPPRAIAEALATRLAADPRILSAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L P+  + +++ ++ +G  YGR+ IG G +VN+EFVSANPTGPMHVGH R AVVGD
Sbjct: 90  LNLRLRPAVWQGLVARVLQAGDAYGRSTIGAGQRVNVEFVSANPTGPMHVGHVRGAVVGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA L+ F+G++VTREYYIND GAQ++ LA S + RY++A +  + ++ EG YPG YL  
Sbjct: 150 ALARLLVFAGWDVTREYYINDGGAQVDVLARSAYERYREA-HGLEPEIREGLYPGDYLIP 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           VG+ L  KY   LL+  E  WL  V++++ + MM++IR+DL AL ++ D++ SE   +  
Sbjct: 209 VGEALKAKYGDSLLDKGEHCWLTDVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   +  L   G +YEG+L PPK KT +  +  R+Q LFRST  GDDVDRP+ KSD
Sbjct: 267 GTGKIEAALQRLQDMGLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GS+TYFA D+AY   K  RGFD +I + G+DH GYVKR++A  AA+S+ +  +++ L +L
Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSDGRVPLDIKLIQL 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G P KMSKRAG ++TLR VV++VG+D  RF+ML RKN   LDFDF KV EQSKE
Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGADVTRFVMLTRKNDAALDFDFDKVLEQSKE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA AR  S+ R+A++    +D           +     +E+ LI  LAE+PR+
Sbjct: 446 NPVFYVQYANARINSVLRKARE--QGMDVADAALACADLDRLDHPAEIALIAKLAEWPRL 503

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E A    EP+++AFYL++L+S  HG W+ G + P LRF+Q ++  ++  ++ L  AV  
Sbjct: 504 VEIAARTNEPHRIAFYLHELSSDLHGLWNRGNDEPGLRFLQ-DDPVVSQAKIALARAVGV 562

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL I+GV    EM
Sbjct: 563 VICAGLGILGVTPVEEM 579


>gi|84687542|ref|ZP_01015418.1| arginyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664451|gb|EAQ10939.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 572

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/587 (45%), Positives = 383/587 (65%), Gaps = 18/587 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  S +   L  +  +  +   +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFADIRSLVIASLDALVAEGALPAGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGA 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A++  D  + S  +AG GF+NL L P     ++   V++  +YG + +G+
Sbjct: 61  KPRDIADALSAKLAADDRIASAEVAGPGFLNLRLEPGVWAALVEG-VLADPDYGTSDMGQ 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+A++G++VTREYYIND GAQ++ LA 
Sbjct: 120 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGHDVTREYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  K     +   E+ WL  V+D++  
Sbjct: 180 SVYLRYLEA-HGQEVAFEDGTYPGDYLIEVGEALKAKVGDAFVGKGEQFWLEDVRDFATD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM+ +IR DLKAL ++ D+F SE   +      I   I++L  +G +Y+G L PPK K +
Sbjct: 239 AMLDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAAIEDLRGKGLIYKGTLEPPKGKLS 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFKSTDYGDDVDRPIMKSDGAWTYFAPDIAYHYDKVTRGFDQLIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+ K  +++ L +LV+LY++G P KMSKRAG F+TLR VVDEVG 
Sbjct: 356 HGGYVKRMKAAVAALSDNKVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDEVGP 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF K  EQSK+NPVFYVQYA AR  S+ R+A D+        
Sbjct: 416 DVTRFIMLTRKNDAPLDFDFDKALEQSKDNPVFYVQYANARVHSVLRKAADM-------- 467

Query: 480 FPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               V P + S  D +E+++   LAE+PR++E A    EP+++AFYLY+LAS FH  W+ 
Sbjct: 468 ---GVEPGKPSLTDEAEIKVAQKLAEWPRLVEIAARTHEPHRIAFYLYELASEFHALWNK 524

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++P LRF+  ++ + T  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 525 GNDHPELRFLAESDSQATAAKIALPKAVSVVISAGLGILGVTPLEEM 571


>gi|56697351|ref|YP_167719.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81349499|sp|Q5LQI6|SYR_SILPO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56679088|gb|AAV95754.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 581

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/587 (45%), Positives = 386/587 (65%), Gaps = 9/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +    +   L+++  +  + + +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFTEMRGLVLEALEQMQAEGALPQGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  D  V    +AG GF+NL L+    ++++ ++++ G  YGR+ +G+
Sbjct: 61  KPRDIAETLAARLAADARVAKAEVAGPGFLNLTLAAPVWQRVVGTVLLDGTAYGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYQVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +    +  +G YPG YL  VG+ L DK     +  PEE WL  ++D++  
Sbjct: 181 SVYLRYLEA-HGQAVEFVDGTYPGEYLVEVGQALKDKVGDAYVGQPEEVWLEAIRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L ++ D+F SE   +      I   ID+L  +G +Y G L PPK K  
Sbjct: 240 AMMELIRADLAQLGVKMDVFYSEKSLY--GTGRIEAAIDSLRAKGLIYRGTLEPPKGKLP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L+++G P KMSKRAG+F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +   D  D  
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVSSVLRRAAEAGIDTSDTA 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++     E   +EL ++  LAE+PR++E A    EP+++AFYLY+LA  FH  W+ 
Sbjct: 477 LRAADLGLLGHE---AELAVMRKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNR 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G +   LRF+Q  +   +  ++ L  +VA +I++GL I+GV    EM
Sbjct: 534 GNDVSELRFIQDGDEGTSQAKIALARSVAVVISAGLAILGVTPAEEM 580


>gi|119384607|ref|YP_915663.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166232819|sp|A1B373|SYR_PARDP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119374374|gb|ABL69967.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 581

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/586 (46%), Positives = 383/586 (65%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  + +   L +++   ++   +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFSDIRTLVIGALAQMEQAGELPAGLDTANVTVEPPRDAAHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP + S  +AG GF+NL L     + ++ + +  G +YGR+ +G+
Sbjct: 61  KPRDIAEALAARLAADPRIASAEVAGPGFLNLRLVSGEWQSVVRAALAEGGDYGRSEMGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+EFVSANPTGPMHVGH R AV GD LA+L+ FSG+EVTREYYIND GAQ++ LA 
Sbjct: 121 GQRINVEFVSANPTGPMHVGHTRGAVFGDALAALLDFSGHEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A    + ++ EG YPG YL  VG+ L  KY   LL+ PEE+WL  V+D++ +
Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKTKYGETLLDKPEEEWLAEVRDFATR 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN+  D+F SE   +      I   I+ L + G +YEG+L PPK KT 
Sbjct: 240 AMMDMIREDLALLNVHMDVFSSEKALY--GTGRIEAAIERLRQAGLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K ERG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHWDKIERGYDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR+ A   A+S+ +  ++V L +LVRL+++G P KMSKRAG F+TLR VV++ G+
Sbjct: 357 HGGYVKRMTAAVKALSDGRVPLDVKLIQLVRLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF +V EQSK+NPV+YVQYA AR  S+  +A  +  D     
Sbjct: 417 DVTRFHMLTRKNDAALDFDFARVLEQSKDNPVWYVQYASARVNSVLNKAAGMGVDTTDAA 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  + Q S    +EL+L   +AE+PR +E A  A EP+++AF+LYD+AS  H  W+ G
Sbjct: 477 LAQADLAQLSH--PAELELARKVAEWPRTVEIAARAHEPHRIAFFLYDIASELHSLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q  +      ++ L  +V  +I++GL I+GV    EM
Sbjct: 535 NDEPALRFLQEGDPAAMAAKIALARSVGVVISAGLGILGVTPAKEM 580


>gi|329114103|ref|ZP_08242867.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696642|gb|EGE48319.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 599

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/580 (47%), Positives = 373/580 (64%), Gaps = 23/580 (3%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           V ++ L R+ +   RD AHG ++TNAA++L++     P  IA  +VA ++    V SV  
Sbjct: 24  VPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPSDIAADLVAALQKVDGVASVAA 83

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+N+ L P  +R +L +++ +G  YG +  GKG +VN+E+VSANPTGPMHVGHCR 
Sbjct: 84  AGPGFVNITLKPDVMRSVLPAVLRAGEAYGASQAGKGLRVNVEYVSANPTGPMHVGHCRG 143

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-----YNNDSDLPE 198
           AVVGD LA+LMA +G+ VT+E+YINDAGAQ+  LA + +WRY QAL      ++ S L  
Sbjct: 144 AVVGDALANLMAKAGFAVTKEFYINDAGAQVKALAWAAYWRYLQALGTKMTQDDFSALAP 203

Query: 199 G--YYPGVYLKHVGKELADKYSSEL---------LNFPEEKWLPIVKDYSVQAMMKIIRD 247
           G   Y G YL  VG ELA +Y ++L         L  PE  WL  V+ ++V  M+  I++
Sbjct: 204 GGLQYQGEYLIPVGMELAAEYGNKLTETDADGAPLPAPEATWLETVRGFAVAHMLTAIKE 263

Query: 248 DLKALNIQHDIFISEDD-FHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           DL AL + HD+F SE +  HRG    + D  I  L +QG +YEG+L PPK K  +  + +
Sbjct: 264 DLAALGVHHDVFTSEAEVLHRG----VTDAAISKLEQQGLLYEGVLEPPKGKLPEDWE-E 318

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R+QLLFRST  GDDVDRPL KSDG+ TYFA D+ Y   K  RG   MI V G+DH GYVK
Sbjct: 319 REQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKVARGAQMMIDVWGADHGGYVK 378

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   A++     + V+LC++V + RDG P+KMSKRAG F+TLR ++DEVG D+VRF 
Sbjct: 379 RMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAGTFVTLRDLIDEVGRDAVRFT 438

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML RK+   ++FD   V  Q ++NPVFYVQYA+ARCRS+ R A +     D D       
Sbjct: 439 MLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVLRAAAEAAVYGDTDDAALASA 498

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             ES    +E+ LI  LAE+PR++E A +A+EP+++AFYL D+A  FH  W+ GR++  L
Sbjct: 499 SLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYLADVAGDFHALWNRGRDDASL 558

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RF+Q +  + T  RL LV A A +I SGL I+GVE   EM
Sbjct: 559 RFLQPDAVEATRARLALVAATAVVIRSGLAIMGVEPVEEM 598


>gi|241762271|ref|ZP_04760352.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752688|ref|YP_003225581.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241373174|gb|EER62804.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552051|gb|ACV74997.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 574

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/591 (46%), Positives = 382/591 (64%), Gaps = 23/591 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F+++L + L   + +  +   +   R+ +E PRD +HG L+ NAAM+L++    
Sbjct: 1   MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +V  +     V+SV IAG GFIN+ L+    RK L+ I+  G +YGR+ IG+
Sbjct: 61  APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA 
Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL   +  +PEG YPG YL  VGK LA+KY    LN PE +WL + ++ +V 
Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  L I HD F SE   H+     ++  ID L ++G +Y+G+L  PK +T 
Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHKA--GIVQKAIDKLEKEGLIYKGVLEAPKGETP 297

Query: 300 QKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           +  D +  +L LFR+T  GDD DRP+ KSDGSYTYF ADLAY   K     D ++ + G+
Sbjct: 298 E--DWEPVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAATA-DQLVDIWGA 354

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH+G VKR++A  AA+++ K  ++V L ++V L R G P+KMSKR+G+F+TL  VV EVG
Sbjct: 355 DHAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVG 414

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+           
Sbjct: 415 RDVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR----------- 463

Query: 479 LFPRNV-IPQESE---FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L   N+ +P++++    D  EL LI   A++PR+IE A +A EP+++ FYL+ LA+ FH 
Sbjct: 464 LVSENITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAHEPHRIVFYLFTLAADFHS 523

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            W+ G +NP  RF+  +N   T  RL L  AV  +I +GL ++GV +  EM
Sbjct: 524 LWNKGNDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574


>gi|254462799|ref|ZP_05076215.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206679388|gb|EDZ43875.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 577

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/587 (44%), Positives = 385/587 (65%), Gaps = 13/587 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S +   L+ +  +  +   +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFDDIRSAVLTSLEAMQAQGVLPADLDFANVAVEPPRDGAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +   + +DP ++SV +AG GF+N+ LS +  + ++ +++  G ++GR+ +G+
Sbjct: 61  KPRDIADALARHLILDPRIESVDVAGPGFLNMRLSSALWQGVIGTVLDQGADFGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY VTREYYIND GAQ++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYAVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+EL +K S   +   E  WL  V+++S +
Sbjct: 181 SVYLRYLEA-HGQEVAFEDGTYPGDYLIPVGEELKEKVSDAYVGKHESDWLLDVREFSTE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM ++R DL +L I+ D+F SE   +      I   ID L  +G +YEG+L PPK K  
Sbjct: 240 KMMDLVRADLASLGIEMDVFYSEKSLY--GTGRIEAAIDALKDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGAWTYFAPDIAYHYDKVSRGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            + RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A D   DL    
Sbjct: 417 GATRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVHSVLRKASDAGLDL---- 472

Query: 480 FPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              +  P  ++ +  +E+ +   LAE+PR++  A    EP+++AFYLYDLAS FH  ++ 
Sbjct: 473 ---SATPDLTQLNHEAEIAVAKKLAEWPRLVALAARTNEPHRIAFYLYDLASEFHALYNR 529

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G E P LRF+Q      ++ ++ L  +V+ +I +GL I+GV+   EM
Sbjct: 530 GNELPELRFLQDGQDATSISKIALARSVSVVICAGLGILGVDPVEEM 576


>gi|283856343|ref|YP_162578.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775340|gb|AAV89467.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 574

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/591 (46%), Positives = 382/591 (64%), Gaps = 23/591 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F+++L + L   + +  +   +   R+ +E PRD +HG L+ NAAM+L++    
Sbjct: 1   MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +V  +     V+SV IAG GFIN+ L+    RK L+ I+  G +YGR+ IG+
Sbjct: 61  APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA 
Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL   +  +PEG YPG YL  VGK LA+KY    LN PE +WL + ++ +V 
Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  L I HD F SE   H+     ++  ID L ++G +Y+G+L  PK +T 
Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHKA--GIVQKAIDKLEKEGLIYKGVLEAPKGETP 297

Query: 300 QKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           +  D +  +L LFR+T  GDD DRP+ KSDGSYTYF ADLAY   K     D ++ + G+
Sbjct: 298 E--DWEPVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAATA-DQLVDIWGA 354

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH+G VKR++A  AA+++ K  ++V L ++V L R G P+KMSKR+G+F+TL  VV EVG
Sbjct: 355 DHAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVG 414

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+           
Sbjct: 415 RDVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR----------- 463

Query: 479 LFPRNV-IPQESE---FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L   N+ +P++++    D  EL LI   A++PR+IE A +A EP+++ FYL+ LA+ FH 
Sbjct: 464 LVSENITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAPEPHRIVFYLFTLAADFHS 523

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            W+ G +NP  RF+  +N   T  RL L  AV  +I +GL ++GV +  EM
Sbjct: 524 LWNKGNDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574


>gi|94496953|ref|ZP_01303527.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423629|gb|EAT08656.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 575

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/589 (46%), Positives = 375/589 (63%), Gaps = 19/589 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG 58
           M L+  F++ L   L  ++    V    L+R  + +E PRD +HG L+TNAAM+L++P G
Sbjct: 1   MSLYTRFTAHLDAVLDALEAD-GVLPAGLNRKPVTVEPPRDSSHGDLATNAAMVLAKPAG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +AE IVA+++   +V S  IAG GFIN+ L+ +  R  L++I   G  YGR+ +G
Sbjct: 60  TNPRALAEAIVAKLQALDEVTSAAIAGPGFINMTLTDATWRAELAAIHADGANYGRSALG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G  VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G++V REYYINDAG Q++ LA
Sbjct: 120 QGVSVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEYAGHKVIREYYINDAGGQVDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S   RY++AL  +   +PEG YPG YL  VG+ LA +Y       PE  WL   + ++V
Sbjct: 180 RSAHLRYREALGEDVGAIPEGLYPGDYLVPVGQALAAEYGDRFAGAPESDWLVTFRTFAV 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             MM +IR DL  L I HDIF SE +    G P         L     VY+G+L  PK +
Sbjct: 240 AKMMDMIRSDLALLGIHHDIFASEAELQAAGKPDEAEAW---LRAHDLVYDGVLEAPKGE 296

Query: 298 TTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D +  +L LFRST  GDD DRP+ KS+G++TYF AD+AY   K +   D +I + 
Sbjct: 297 LPD--DWEPVELPLFRSTKFGDDQDRPIKKSNGAWTYFGADMAYHFQKAQSA-DQLIDIW 353

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+G VKR++A  AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL  VV E
Sbjct: 354 GADHAGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVQE 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A++    L 
Sbjct: 414 VGKDVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIALP 473

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                    P  S   T+EL L+   A++PRV+E A  A+EP+++AFYL DLAS FHG W
Sbjct: 474 --------APDLSLLGTAELSLVKLAAQFPRVVEGAAQAREPHRIAFYLNDLASAFHGWW 525

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G ++P  R ++A++  LT  RL L   +  II +GL ++GV +  EM
Sbjct: 526 NMGNDDPGARVIRADDPALTSTRLSLAQGIGQIIRNGLALMGVAALTEM 574


>gi|260427188|ref|ZP_05781167.1| arginyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260421680|gb|EEX14931.1| arginyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 585

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/587 (45%), Positives = 389/587 (66%), Gaps = 10/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   ++ +  + I  E      + +E PRD  HG ++TNAAM+L++P   
Sbjct: 6   MNLFTDIRALVLQAIEALQAEGILPEGLNTAPVTVEPPRDPLHGDMATNAAMVLAKPAKA 65

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A+I  D  + +  +AG GF+NL L+PS  + +  +++  G ++GR+ +G+
Sbjct: 66  RPRDIAEALAAKIGADDRIVAAEVAGPGFLNLRLAPSVWQALPGAVLTQGTDFGRSDMGQ 125

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 126 GARINVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +AL  ++ +  +G YPG YL  VG+ LA +   + ++ PEE WL  +++++  
Sbjct: 186 SVYLRYLEAL-GHEVEFADGTYPGDYLIPVGEMLAARVGEQYVDQPEEVWLEEIRNFATD 244

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MMK+IR+DLK L ++ D F SE   +      I   I++L  +G +Y G+L PPK KT 
Sbjct: 245 EMMKLIREDLKLLGVEMDHFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKTP 302

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 303 EDWE-PREQTLFKSTEHGDDVDRPIKKSDGAWTYFAPDIAYHYDKVSRGFDQLIDVFGAD 361

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG F+TLR VV+EVG 
Sbjct: 362 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEEVGP 421

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN   LDFDF K  EQSKENPVFYVQYA+AR  S+ R+A +   D+ D  
Sbjct: 422 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKAVEQGIDVSDAA 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++   + E   +EL L+  +AE+PR++E A    EP+K+A +L +LAS  HG W+ 
Sbjct: 482 LARADLTALDHE---AELGLMKKVAEWPRLVEIAAKGHEPHKVAIWLNELASELHGLWNR 538

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + P LRF+Q ++ + +  ++ L  +VA +I++GL I+GV    EM
Sbjct: 539 GHDEPGLRFLQ-DDAETSQRKIALARSVAVVISAGLGILGVTPAEEM 584


>gi|86138649|ref|ZP_01057222.1| arginyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824709|gb|EAQ44911.1| arginyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 581

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 265/586 (45%), Positives = 376/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  + + + L  +  +  + E +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFSDIRALVIDSLTAMTAEGALPEGQDFANVAVEPPRDSAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A++  D  + S  +AG GF+NL LSP   + +L +++  G++YGR  +G+
Sbjct: 61  KPRDIADALAAKLAQDARIASAEVAGPGFLNLRLSPVVWQSVLGAVLEGGLDYGRANLGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLGYAGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YLK VG  L DK     LN  E+ WL  V+++S  
Sbjct: 181 SVYLRYLEA-HGQEVAFADGTYPGDYLKPVGAALKDKVGDAYLNKGEDVWLSEVREFSTD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L I+ D+F SE   +      I   ++ L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIREDLALLGIKMDVFYSEKSLY--GTGRIEAALEELESKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDR + KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NP+FYVQYA AR  S  R+A +     D  +
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPIFYVQYANARICSTLRKAGEADIATDDAV 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                + Q S    ++L ++  LAE+PR IE A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LGAADLAQVSH--PAQLAVVKKLAEWPRQIEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  ++   T   L L  +V+ +I++GL I+GV+   EM
Sbjct: 535 KTEFGLRFVNESSETATHANLALARSVSIVISAGLGILGVKPAQEM 580


>gi|296284542|ref|ZP_06862540.1| arginyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 581

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/592 (45%), Positives = 380/592 (64%), Gaps = 26/592 (4%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++A ++ R+   L  ++ +  +   +    + +E PRD AHG ++TNAAM+L++P   +P
Sbjct: 7   IYAAYAERIDAVLSALEAEGTLPPDVSRANVSVEPPRDPAHGDIATNAAMVLAKPAKTNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE IV  +K DPD++S  IAG GFINL ++       + +I   G EYGR+ +GK T
Sbjct: 67  RALAEQIVEHLKRDPDIESAEIAGPGFINLRIADRAWVDEIRAIGSLGGEYGRSSMGKDT 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++N+E+VSANPTGPMH+GHCR AVVGD LASL+  +G+ VTREYY+NDAG Q++ LA S 
Sbjct: 127 RINVEYVSANPTGPMHMGHCRGAVVGDALASLLDATGHSVTREYYVNDAGGQVDVLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +  ++PEG YPG YL  VGK LA+++  E    PE +WLP+ +  +V AM
Sbjct: 187 HVRYREALGESVGEIPEGLYPGEYLIPVGKALAEEFGDEYAAAPESEWLPLFRPRAVAAM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M +IR DL  L I HD+F SE +    G P+        L  QG VY+G L  PK KT +
Sbjct: 247 MDLIRADLAKLGIAHDVFASEAELQAAGKPAEAEAW---LREQGLVYDGELEKPKGKTPE 303

Query: 301 KCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
             D +  +L LFRST  GDD DRP+ KS+GS+TYF ADLAY   K E   D +I + G+D
Sbjct: 304 --DWEPVELPLFRSTQFGDDQDRPIKKSNGSWTYFGADLAYHMQKAENA-DALIDIWGAD 360

Query: 360 HSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           H+G VKR++A  AA+S+ + +    +V L ++V+L RDG P+KMSKR+G+F+TL  VVDE
Sbjct: 361 HAGTVKRIKAAVAALSQGQGKPIPFDVKLVQMVQLMRDGEPVKMSKRSGNFVTLADVVDE 420

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S  R+A +      
Sbjct: 421 VGKDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARICSTMRKAAE------ 474

Query: 477 FDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                  + P +   D     ++ L+   A+YPR++E+A  A+EP+++AFYLYDLA+ FH
Sbjct: 475 -----EGLAPSDEALDALTADDVALVKLAAQYPRLVESAAQAREPHRIAFYLYDLAAAFH 529

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             W+ G ++   R +   +RKL+  RL LV  +  +I +GL ++GVE+  EM
Sbjct: 530 AFWNAGNDDSSKRVILTQDRKLSGARLYLVAQIGQVIRNGLGLLGVEAVEEM 581


>gi|294012801|ref|YP_003546261.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676131|dbj|BAI97649.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 575

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/588 (46%), Positives = 373/588 (63%), Gaps = 17/588 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F++ L   L  ++    +   +  + + +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDASHGDLATNAAMVLAKPAGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I A ++   +V+   IAG GFINL L+ +  R  L++I V   +YGR+  G 
Sbjct: 61  NPRALAEKIAAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHVEAEDYGRSSTGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMH+GHCR AVVGD LA+L+   G++V REYYINDAG Q++ LA 
Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL     ++PEG YPG YL  VG+ LA +Y    +  PE +WL + +  +V 
Sbjct: 181 SAHVRYREALGETVGEIPEGLYPGDYLVPVGQALAAEYGDRYVGAPEGEWLVLFRTKAVA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           AMM++IR DL  L I HDIF SE +    G P         L     VY+G+L  PK +T
Sbjct: 241 AMMEMIRSDLALLGIHHDIFSSEAELQAAGKPEAAEKW---LREHDLVYDGVLEAPKGET 297

Query: 299 TQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            +  D +  +L LFRST  GDD DRP+ KS+GS+TYF AD+AY   K +   D +I + G
Sbjct: 298 PE--DWEPVELPLFRSTRFGDDQDRPIRKSNGSWTYFGADMAYHYQKAQTA-DQLIDIWG 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH G VKR++A  AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL  VV EV
Sbjct: 355 ADHGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREV 414

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A++   DL  
Sbjct: 415 GKDVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGMDLP- 473

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                   P  S   T EL L+   A++PRV+E A +A+EP+++AFYL DLAS FHG W+
Sbjct: 474 -------APDLSRLGTEELGLVKLAAQFPRVVEGAALAREPHRIAFYLNDLASAFHGWWN 526

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G +NPR R +  ++   T  RL L   +  II +GL ++GV +  EM
Sbjct: 527 LGNDNPRARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574


>gi|163739603|ref|ZP_02147012.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161387062|gb|EDQ11422.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 581

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/588 (45%), Positives = 374/588 (63%), Gaps = 11/588 (1%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L   +D     E      + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVLDCLTAMVDEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +  ++  D  V S  +AG GF+NL L  S  + +L +++   I++GR+ +G 
Sbjct: 61  KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L DK     +N PE+ WL  +++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL +L IQ D F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDF 477
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A +  I  D D 
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAEAGITTD-DA 475

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L   ++   +   D ++L +   LAE+PR++E A    EP+++AFYLYDLAS  HG + 
Sbjct: 476 TLAAADLTLLQ---DDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYH 532

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G+ N  LRFV  +N   T  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 533 LGKTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580


>gi|99080744|ref|YP_612898.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|122984355|sp|Q1GI80|SYR_SILST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|99037024|gb|ABF63636.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 580

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/595 (43%), Positives = 373/595 (62%), Gaps = 25/595 (4%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL L  S  + +L   + +   YGR+ +G+
Sbjct: 61  KPRDIAEALAAKLAQDKRITSAEVAGPGFLNLRLDLSVWQDVLGKALNAEEAYGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY +A +    + P+G YPG YLK VG  L DK+    +  PEE WL  V++++  
Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKDKFGDRFVGQPEETWLEEVRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL  L ++ D+F SE   +      I   +++L  +G +YEG+L PPK K  
Sbjct: 240 MMMDLIREDLALLGVEMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 DDWE-PRIQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  ++V LC+LV+L++DG   KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDVKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++         
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREA-------- 468

Query: 480 FPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               +   E+    ++L L+ H         +AE+PR +E A    EP+++AF+LY+LAS
Sbjct: 469 ---GIACDEATLSGADLSLLTHDAQLAVARKVAEWPRQVEIAARTNEPHRIAFFLYELAS 525

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             HG +  G+    LRFV  ++   T   L L  AV+ +I++GL I+GV+   EM
Sbjct: 526 DLHGLYHLGKSEESLRFVNESSELATHANLALARAVSIVISAGLGILGVKPAQEM 580


>gi|114762852|ref|ZP_01442284.1| arginyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114544462|gb|EAU47469.1| arginyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 580

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 267/587 (45%), Positives = 385/587 (65%), Gaps = 10/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   ++ +  +  + + +    + +E PRD  HG ++TNAAM+L++P   
Sbjct: 1   MNLFTDIRALVLQAIEALQAEGALPEGLATAAVTVEPPRDPLHGDMATNAAMVLAKPAKA 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A+I  D  VD   +AG GF+NL L+PS  + +   ++ +G ++GR+ +G+
Sbjct: 61  KPRDIAEALAAKIAADDRVDHAEVAGPGFLNLRLAPSVWQALPQGVLAAGTDFGRSQMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GAKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A   ++ +  +G YPG YL  VG++L ++     +  PEE WL  V++++  
Sbjct: 181 SVYLRYLEA-QGHEVEFADGTYPGDYLIPVGEKLKEQVGDRYVGQPEEVWLEEVRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DLK L ++ D F SE   +      I   I++L  +G +Y G+L PPK K  
Sbjct: 240 EMMALIREDLKMLGVEMDQFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGYDQLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+LY++G P KMSKRAG F+TLR VV+EVG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLYKNGEPFKMSKRAGTFVTLRDVVEEVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN   LDFDF K  EQSKENPVFYVQYA+AR  S+ R+A +   D+ D  
Sbjct: 417 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKATEAGVDVSDAA 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V     E   +EL L+  LAE+PR++E A    EP+K+A +L +LAS  H  W+ 
Sbjct: 477 LAGADVSVLSHE---AELGLMKKLAEWPRLVEIAAKGHEPHKVAIWLNELASDLHALWNK 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + P LRF+Q ++  L+  ++ L  AVA +I++GL I+GV    EM
Sbjct: 534 GHDEPALRFLQ-DDAALSQSKIALARAVAVVISAGLGILGVTPVEEM 579


>gi|258543179|ref|YP_003188612.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634257|dbj|BAI00233.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637317|dbj|BAI03286.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640369|dbj|BAI06331.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643426|dbj|BAI09381.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646481|dbj|BAI12429.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649534|dbj|BAI15475.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652520|dbj|BAI18454.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655578|dbj|BAI21505.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 599

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/580 (46%), Positives = 371/580 (63%), Gaps = 23/580 (3%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           V ++ L R+ +   RD AHG ++TNAA++L++     P  IA  +V  ++    V SV  
Sbjct: 24  VPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPADIAADLVTALQKVEGVASVAA 83

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+N+ L P  +R IL +++ +G  YG +  GKG +VN+E+VSANPTGPMHVGHCR 
Sbjct: 84  AGPGFVNITLKPDVMRGILPAVLNAGEAYGASQAGKGLRVNVEYVSANPTGPMHVGHCRG 143

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-----YNNDSDLPE 198
           AVVGD LA+LMA +G+ VT+E+YINDAGAQ+  LA + +WRY QAL      ++ S L  
Sbjct: 144 AVVGDALANLMAKAGFAVTKEFYINDAGAQVRALAWAAYWRYLQALGTKMTQDDFSALAP 203

Query: 199 G--YYPGVYLKHVGKELADKYSSEL---------LNFPEEKWLPIVKDYSVQAMMKIIRD 247
           G   Y G YL  VG ELA +Y ++L         L  PE  WL  V+ ++V  M+  I++
Sbjct: 204 GGLQYQGEYLIPVGMELAAEYGNKLTETDADGSPLPAPEVTWLETVRGFAVTHMLTAIKE 263

Query: 248 DLKALNIQHDIFISEDD-FHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           DL AL + HD+F SE +   RG    + D  I  L +QG +YEG+L PPK K  +  + +
Sbjct: 264 DLAALGVHHDVFTSEAEVLRRG----VTDAAISKLEQQGLLYEGVLEPPKGKLPEDWE-E 318

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R+QLLFRST  GDDVDRPL KSDG+ TYFA D+ Y   K  RG   MI V G+DH GYVK
Sbjct: 319 REQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKVARGAQMMIDVWGADHGGYVK 378

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   A++     + V+LC++V + RDG P+KMSKRAG F+TLR ++DEVG D+VRF 
Sbjct: 379 RMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAGTFVTLRDLIDEVGRDAVRFT 438

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML RK+   ++FD   V  Q ++NPVFYVQYA+ARCRS+ R A +     + D       
Sbjct: 439 MLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVLRAAAEAAAYGETDDAALASA 498

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             ES    +E+ LI  LAE+PR++E A +A+EP+++AFYL D+A  FH  W+ GR++  L
Sbjct: 499 SLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYLADVAGDFHALWNRGRDDASL 558

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RF+Q +  + T  RL LV A A +I SGL ++GVE   EM
Sbjct: 559 RFLQPDAVEATRARLALVAATAVVIRSGLAVMGVEPVEEM 598


>gi|83593114|ref|YP_426866.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|109895029|sp|Q2RTG6|SYR_RHORT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83576028|gb|ABC22579.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 592

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/563 (45%), Positives = 361/563 (64%), Gaps = 11/563 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ +E PR+ AHG ++TNAAM+L++P GL P  +AE++V ++     + +   AG GFIN
Sbjct: 32  RVAVEPPREAAHGDMATNAAMVLAKPAGLAPRAVAEMLVEKLVGVDGIVAAETAGPGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L P   RK L +++  G  +G + +G+G  VN+EFVSANPTGPMHVGH R AV GD L
Sbjct: 92  LRLDPKIWRKTLKTVLTLGTAFGASTMGRGAAVNVEFVSANPTGPMHVGHGRGAVFGDAL 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-------EGYYPG 203
           A+L+  +G+ VTREYY+NDAGAQ+++LA +++ RY+ A+ + D           E  Y G
Sbjct: 152 AALLVKAGWAVTREYYVNDAGAQVDSLARALYARYRVAVGDLDEAAFAAMLAAREIEYGG 211

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            YL  V  ++A    +      E  WLP  +   ++ M+ +I++DL AL + HD+F SE 
Sbjct: 212 DYLVPVAADIAQADGTRWTTVAESDWLPAFRAIGIERMLALIKEDLAALGVVHDVFTSEQ 271

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
              R     + +++ +L  +  VY G L PPK KT    +  R Q LFR+T  GD+VDRP
Sbjct: 272 ALVRA--GRVDEMMTDLESRDLVYVGTLEPPKGKTPDDWE-PRPQTLFRATGFGDEVDRP 328

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L KSDGS+TYFA+D+AY   K++RGF  MI V+G+DH GYVKRL+A   AVS  +A+++V
Sbjct: 329 LKKSDGSWTYFASDIAYHHDKFKRGFLGMINVLGADHGGYVKRLKAAVKAVSNGEAELDV 388

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            L +LV+L  +G P+KMSKRAG FITLR VVDEVG D VRF+ML RKN   LDFD+ +V 
Sbjct: 389 KLVQLVKLLDNGEPVKMSKRAGTFITLREVVDEVGKDVVRFIMLTRKNDAALDFDYARVT 448

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHL 502
           E++++NPVFYVQYA+AR  S+ R A   FP               +      E+ ++  L
Sbjct: 449 EKTRDNPVFYVQYAHARACSVARHAAQTFPGRDLSAAALAATADLDLLDADEEMAMVRLL 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A +PR++E+A  A EP+++AFYL ++A+ FHG W+ G +N  LRF+   +   ++ RL L
Sbjct: 509 AGWPRLVESAAEAHEPHRVAFYLGEVAAAFHGLWNRGNDNAELRFLLPTDEARSLARLAL 568

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V AVAS+I SGL I GVE   EM
Sbjct: 569 VQAVASVIASGLEIFGVEPVKEM 591


>gi|5834360|gb|AAD53926.1|AF179611_10 arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 580

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/559 (47%), Positives = 361/559 (64%), Gaps = 19/559 (3%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ +E PRD +HG L+ NAAM+L++     P  +AE +V  +     V+SV IAG GFIN
Sbjct: 37  RVAVEPPRDPSHGDLAINAAMVLAKAAKTAPRALAEKLVESLSQLEGVESVEIAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L+    RK L+ I+  G +YGR+ IG+  +VN+E+VSANPTGPMH+GHCR AVVGD L
Sbjct: 97  IRLTDDCWRKELTHILEQGQDYGRSDIGQNLRVNVEYVSANPTGPMHMGHCRGAVVGDAL 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ASL+ F+GY+VTREYY+NDAG Q+ TLA S + RY++AL   +  +PEG YPG YL  VG
Sbjct: 157 ASLLDFAGYKVTREYYVNDAGQQVQTLARSAYMRYREAL-GEEITIPEGLYPGDYLVPVG 215

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K LA+KY    LN PE +WL + ++ +V AMM +IRDDL  L I HD F SE   H+   
Sbjct: 216 KLLAEKYGDRYLNAPESEWLALFRETTVAAMMDMIRDDLALLGIHHDKFTSEAALHKA-- 273

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             ++  ID L ++G +Y+G+L  PK +T +     R  L+ R+T   DD DRP+  SDGS
Sbjct: 274 GIVQKAIDKLEKEGLIYKGVLEAPKGETPEDLVTCRTDLVSRATKFSDDSDRPVQISDGS 333

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF ADLAY   K     D ++ + G+DH+G VKR++A  AA+++ K  ++V L ++V 
Sbjct: 334 YTYFGADLAYHARKAATA-DQLVDIWGADHAGTVKRIKAAVAALTQNKVPLDVKLVQMVH 392

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G P+KMSKR  +F+TL  VV EVG D VRF ML RK    +DFDF KV E SK+NP
Sbjct: 393 LLRGGEPVKMSKRFRNFVTLADVVSEVGRDVVRFSMLTRKADAQMDFDFEKVIEASKDNP 452

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESE---FDTSELQLIVHLAEYP 506
           VFYVQYA+AR  S+ R+           L   N+ +P++++    D  EL LI   A++P
Sbjct: 453 VFYVQYAHARVHSLHRR-----------LVSENITLPEKADLNLLDKEELALIQQAAQFP 501

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           R+IE A +A EP+++ FYL+ LA+ FH  W+ G +NP  RF+  +N   T  RL L  AV
Sbjct: 502 RLIEAAAVAHEPHRIVFYLFTLAADFHSLWNKGNDNPDRRFLLPDNPAKTAARLALADAV 561

Query: 567 ASIINSGLNIIGVESPNEM 585
             +I +GL ++GV +  EM
Sbjct: 562 GQVIRNGLGVVGVNASEEM 580


>gi|330993304|ref|ZP_08317240.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759706|gb|EGG76214.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 601

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/601 (44%), Positives = 381/601 (63%), Gaps = 23/601 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LFA + + +++ L+ I     +    L R+ +   RD AHG L+TNAA+++S+     P 
Sbjct: 5   LFARYLTHVRDALRTI--MPDLPDAALARVEVTPTRDPAHGDLATNAALVISKAARRRPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V  +   P +    +AG GF+N++L+P+  + +  +++ +G  YG +  G G K
Sbjct: 63  EIAAGLVTALATVPGIARAEVAGPGFVNMHLTPAVWQGVARAVLAAGEGYGTSTAGNGVK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDVLANLLAKAGYAVTKEYYINDAGAQVIALAWATY 182

Query: 183 WRYQQALYNNDSD------LPEG--YYPGVYLKHVGKELADKYSSELLN---FPEEK--W 229
           WRY QAL  + S+      +P G   Y G YL  VG+ LA+++   L      P E   W
Sbjct: 183 WRYLQALGTSVSEAEFAQSVPGGAIQYGGDYLVPVGRALAERHGDALAAPGLRPAEPALW 242

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  VK  +V  MM +IR+DL AL + HD+F SE      D    R  I  L  +G +YEG
Sbjct: 243 LDTVKTEAVDTMMGMIREDLAALGVHHDVFTSEAKI-LADGETDR-AIAALDAKGLIYEG 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +L PPK K     +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG 
Sbjct: 301 VLEPPKGKLPDDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIRRGA 359

Query: 350 DNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D ++ V G+DH GYV R++ AVAA  ++ +  ++VLLC++VR+ RDG P++MSKRAG F+
Sbjct: 360 DVLVDVWGADHGGYVTRMKAAVAALATDGRPVLDVLLCQIVRIVRDGQPVRMSKRAGTFV 419

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR ++DEVG D+VRF ML RK    ++FD  +V  QS++NPVFYVQYA+ARCRS+ R A
Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCRSVLRAA 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            ++     FDL        +++       +EL L+  +A++PR++E+A  A EP+++AFY
Sbjct: 480 AEMVEKGVFDLSTTPASLGDADLSGLTSDAELALLRRMAQWPRMVESAASAHEPHRIAFY 539

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L +LAS FH  W+ GR++  LRF+Q ++   T M+L LV A A+++ SG+ ++GV+   E
Sbjct: 540 LNELASDFHALWNRGRDDATLRFLQEHDVATTRMKLALVEATATVLRSGMKVLGVQPVEE 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|163741411|ref|ZP_02148802.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385145|gb|EDQ09523.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 581

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVLDCLTAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +  ++  D  V S  +AG GF+NL L  S  + +L +++   I++GR+ +G 
Sbjct: 61  KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L DK     +N PE+ WL  +++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL +L IQ D F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A +    +  D 
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAE--AGIATDD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D ++L +   LAE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 475 ATLAAADLTLLQDDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N  LRFV  +N   T  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 535 KTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580


>gi|296535511|ref|ZP_06897697.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264166|gb|EFH10605.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 594

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/572 (46%), Positives = 368/572 (64%), Gaps = 22/572 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++ L R+ +E PRD +HG +STNAAM++++   L P  +A  + A +   P V     AG
Sbjct: 32  EEALARVTVEPPRDASHGDMSTNAAMVVAKIAKLPPPKLAAELAAALAALPSVAEAAPAG 91

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GF+NL L+  +L   +++++ +G  YG +  G G +VN+E+VSANPTGPMHVGHCR AV
Sbjct: 92  PGFVNLRLAEDFLLGQVATVLRAGEAYGDSQAGGGVRVNVEYVSANPTGPMHVGHCRGAV 151

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD------LPEG 199
           VGD LA+L+A +G  VT+EYYINDAGAQ+  L  + +WRY QAL    ++      +P G
Sbjct: 152 VGDALANLLAKAGAAVTKEYYINDAGAQVQALGYAAYWRYLQALGTTLTEEAYAEAVPGG 211

Query: 200 Y-YPGVYLKHVGKELADKYSSELL--NFPEEK--WLPIVKDYSVQAMMKIIRDDLKALNI 254
             Y G YL  VG+ L +K+   L     P E   WL  V++++V AMM+ IR+DL AL +
Sbjct: 212 LQYRGDYLVPVGEALKEKFGDSLAPGAVPAEASLWLDTVRNFAVDAMMEAIREDLAALGV 271

Query: 255 QHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            HD+FISE    R     + D  I  L+ +G VYEG+L PPK KT    +  R Q LF S
Sbjct: 272 AHDVFISEAQLVR---DGVADAAIAALSEKGLVYEGVLEPPKGKTPDDWE-PRPQTLFAS 327

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           T  GDDVDRPL KSDGS TYFA D+     K  RG   ++ V G+DH GYVKR++A   A
Sbjct: 328 TKFGDDVDRPLRKSDGSNTYFANDIGNHADKIARGMQQLVQVWGADHGGYVKRMQAATKA 387

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +S+    ++VLLC++V++ + G P++MSKRAG +ITLR ++DEVG D+VRF ML RK+  
Sbjct: 388 LSDGAVPLDVLLCQIVKVMKGGEPVRMSKRAGTYITLRDLIDEVGRDAVRFTMLTRKSDA 447

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            ++FD  +V EQS++NPVFYVQYA+ARCRS+ RQA D   +   D       P  S  D 
Sbjct: 448 QMEFDLDRVVEQSRDNPVFYVQYAHARCRSVLRQAGDPAREALAD------APLSSLKDA 501

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +EL LI  +A +PR++E A  A+EP+++AFYL DLA+ FH  W+ GR++  LRF+QA   
Sbjct: 502 AELALIRRIAAWPRIVEAAAAAREPHRIAFYLGDLAADFHILWNRGRDDATLRFIQAEAP 561

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + T  RL LV A A +I SGL ++GV+   EM
Sbjct: 562 EATRARLALVAATAIVIRSGLAVMGVQPVEEM 593


>gi|89053998|ref|YP_509449.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|109894997|sp|Q28S88|SYR_JANSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88863547|gb|ABD54424.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 575

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/556 (47%), Positives = 368/556 (66%), Gaps = 15/556 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E PRD +HG ++TNAAM+L++P G+ P  IAE + A++  D  +D+V +AG GF+NL
Sbjct: 33  VTVEPPRDASHGDMATNAAMVLAKPAGMKPRDIAEALAAKLADDARIDTVDVAGPGFLNL 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS    R +++  +  G  YGR+ IG G +VN+E+VSANPTGP+HVGH R AV GD LA
Sbjct: 93  RLSGDVWRGVIADALTQGEAYGRSKIGAGKRVNVEYVSANPTGPLHVGHTRGAVFGDALA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           SL+  +GY+VTREYYIND GAQ++ L  SV+ RY +A +  D    +G YPG YL  VG+
Sbjct: 153 SLLDVAGYDVTREYYINDGGAQVDVLVRSVYLRYLEA-HGQDVAFEDGTYPGDYLIDVGQ 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L DK     ++  E+ WL  +++++ + MM +IR DL  L ++ D+F SE   +     
Sbjct: 212 ALKDKVGDAFVDKGEQFWLAEIREFATEQMMDLIRKDLALLGVEMDVFYSEKSLY--GTG 269

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I   ID+L  +G +YEG L PPK KT +  +  R+Q LF+ST  GDDVDRP++KSDGS+
Sbjct: 270 RIEAAIDDLRGKGLIYEGYLEPPKGKTPEDWE-PREQTLFKSTEHGDDVDRPVMKSDGSW 328

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA D+AY   K  RGFD +I V G+DH GYVKR++A  +A+S     ++V L +LV+L
Sbjct: 329 TYFAPDIAYHFDKVSRGFDELIDVFGADHGGYVKRMKAAVSALSGGDVPLDVKLTQLVKL 388

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            R    +KMSKRAG F+TL  VV+ VG+D  RF ML RKN   LDFD  KV+EQSK+NPV
Sbjct: 389 RRGDEELKMSKRAGTFVTLADVVEMVGADVTRFHMLTRKNDAPLDFDVDKVREQSKDNPV 448

Query: 452 FYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           +YVQYA+AR +S+ R+A++  + PD      P N+    +  D +EL L   +AEYPR+I
Sbjct: 449 WYVQYAHARIKSVLRKAEEAGMSPD------PANL---NAVNDPAELALAAKIAEYPRLI 499

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A    EP+++AFYL+DLAS FHG W+ G     LRF Q ++   T  +L L+ AVA +
Sbjct: 500 EIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQDDDPSATSGKLCLISAVAIV 559

Query: 570 INSGLNIIGVESPNEM 585
           I++GL I+GV   ++M
Sbjct: 560 ISNGLGILGVTPVDQM 575


>gi|259419075|ref|ZP_05742992.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345297|gb|EEW57151.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 580

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/586 (43%), Positives = 372/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL L  S  + +L   +  G  YGR+ +G+
Sbjct: 61  KPRDIAEALAAKLGQDARITSAEVAGPGFLNLRLDLSVWQSVLGKALHEGEAYGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY +A +    + P+G YPG YLK VG  L +K+    +  PE+ WL  V+ ++ +
Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKEKFGDTFVGQPEDVWLEEVRAFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL  L ++ D+F SE   +      I   +++L  +G +YEG+L PPK K  
Sbjct: 240 MMMDLIREDLGLLGVKMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 DDWE-PRVQTLFKSTAHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGQVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++     D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREAGIACDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                + Q +    ++L +   +AE+PR +E A    EP+++AF+LYDLAS  HG +  G
Sbjct: 477 LNAADLSQLTH--EAQLSVARKIAEWPRQVEIAARTNEPHRIAFFLYDLASDLHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  ++   T   L L  AV+ +I++GL I+GV+   EM
Sbjct: 535 KSEESLRFVNESSESATHANLALARAVSIVISAGLGILGVKPAQEM 580


>gi|126739455|ref|ZP_01755148.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719555|gb|EBA16264.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 581

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/594 (43%), Positives = 370/594 (62%), Gaps = 23/594 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVIDSLTAMSAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  D  V S  +AG GF+NL L+P   + ++ +++ +G ++GR+  G 
Sbjct: 61  KPRDIAEALAGKLAADARVTSAEVAGPGFLNLRLAPVVWQGVVDAVLKAGTDFGRSDQGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L DK     L+ PE+ WL  V+++S  
Sbjct: 181 SVYLRYLEA-HGQEIAFADGTYPGDYLVPVGEALKDKVGDAYLDQPEDVWLADVREFSTD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L I+ D+F SE   +      I   +  L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIRADLARLGIEMDVFYSEKSLY--GTGRIEAALKELEEKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDR + KSDG++TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ LC+LV+L++DG   KMSKRAG F+ LR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVMLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--------DI 471
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A         D 
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRRAAAEGIAGDDDT 476

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D  L            D ++L ++  L E+PR +E A    EP+++AFYLYDLAS 
Sbjct: 477 LKSADLTLIS----------DPAQLSVVKKLGEWPRQVEIAARTNEPHRIAFYLYDLASE 526

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            HG +  G+ N  LRFV  +++  T   L L  +V+ +I++GL I+GV+   EM
Sbjct: 527 LHGLYHLGKSNEGLRFVNESSQSATHANLALARSVSIVISAGLGILGVKPAQEM 580


>gi|307294518|ref|ZP_07574360.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878992|gb|EFN10210.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 575

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/588 (45%), Positives = 370/588 (62%), Gaps = 17/588 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F++ L   L  ++    +   +  + + +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDPSHGDLATNAAMVLAKPAGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ IVA ++   +V+   IAG GFINL L+ +  R  L++I     EYGR+  G+
Sbjct: 61  NPRALAQKIVAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHAEAEEYGRSSTGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMH+GHCR AVVGD LA+L+   G++V REYYINDAG Q++ LA 
Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +   +PEG YPG YL  VG+ LA +Y  + +  PE +WL   +  +V 
Sbjct: 181 SAHVRYREALSEDVGGIPEGLYPGDYLVPVGQALAAEYGDKYVGAPESEWLASFRTKAVA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           AMM +IR DL  L I HDIF SE +    G P         L     VY+G+L  PK +T
Sbjct: 241 AMMDMIRSDLALLGIHHDIFSSEAELQAAGKPEAAEKW---LREHDLVYDGVLEAPKGET 297

Query: 299 TQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            +  D +  +L LFRST  GDD DRP+ KS+GS+TYF AD+AY   K +   D +I + G
Sbjct: 298 PE--DWEPVELPLFRSTKFGDDQDRPIKKSNGSWTYFGADMAYHYQKAQTA-DQLIDIWG 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH G VKR++A  AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL  VV EV
Sbjct: 355 ADHGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREV 414

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A++   DL  
Sbjct: 415 GKDVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIDLP- 473

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                   P  S   T EL L+    ++PRV+E A  A+EP+++AFYL DLAS FH  W+
Sbjct: 474 -------APDLSRLGTDELGLVKLAVQFPRVVEGAASAREPHRIAFYLNDLASAFHSWWN 526

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G +NP+ R +  ++   T  RL L   +  II +GL ++GV +  EM
Sbjct: 527 LGNDNPQARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574


>gi|126725250|ref|ZP_01741092.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704454|gb|EBA03545.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 593

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEI-DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  + D  +         + +E PRD +HG ++TNAAM+L++    
Sbjct: 13  MNLFADIRALVIDSLTVMTDEGVLPSGLDFANVTVEPPRDASHGDMATNAAMVLAKAAKS 72

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  VD   +AG GF+NL LS +    + ++ + +G ++GR+ +G+
Sbjct: 73  KPRDIAEALAAKLAEDARVDLAEVAGPGFLNLRLSSAIWHNVTAATLANGTDFGRSNMGE 132

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 133 NKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 192

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RYQ+A +       +G YPG YL  VG+ L +K     L+  E  WL  V++YS +
Sbjct: 193 SVYLRYQEA-HGQKVAFEDGTYPGDYLIEVGQALKEKVGDAYLDQDESVWLQEVREYSTE 251

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL AL ++ D F SE   +      I   + +L  +G +Y+G L PPK K  
Sbjct: 252 AMMNLIREDLLALGVKMDHFYSEKSLY--GTGQIEAALADLDEKGLIYQGYLEPPKGKLP 309

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RG+D +I + G+D
Sbjct: 310 EDWEA-REQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGYDLLIDIFGAD 368

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S     +++ L +LV+L ++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 369 HGGYVKRMKAAVSALSNGTVPLDIKLTQLVKLLKNGEPFKMSKRAGTFVTLRDVVDQVGR 428

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A D   D+    
Sbjct: 429 DVTRFVMLTRKNDAPLDFDFDKVVEQSKDNPVFYVQYAHARIKSVMRRATDAGIDVSPAA 488

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                + + S    +EL L   LAE+PR++E A  + EP+++AFYLY+L+S  H HW+ G
Sbjct: 489 LAAADMSRASH--DAELGLAKKLAEWPRLVEIAARSNEPHRIAFYLYELSSDLHAHWNKG 546

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  + + T  ++ L+ AV+ +I++GL I+GVE   EM
Sbjct: 547 NDDVSLRFLQEGDSETTQAKIALIFAVSIVISAGLGILGVEPVEEM 592


>gi|254477547|ref|ZP_05090933.1| arginyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031790|gb|EEB72625.1| arginyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 581

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVLDCLNAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  D  V S  +AG GF+NL L     + +LS+++  G  +GR+ +G+
Sbjct: 61  KPRDIAEALATKLAADARVTSAEVAGPGFLNLRLDQGSWQAVLSNVLAEGTNFGRSNMGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F G++VTREYYIND G Q++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGFDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  K     +  PEE WL  +++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGEALKAKVGDAYVGQPEEVWLEEIRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL +L ++ D F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIREDLASLGVKMDKFFSEKSLY--GTGLIEAALKSLDDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I V G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+SE K  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSEGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++    +D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSSLRKAEEAGIAVDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      D ++L +   +AE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LAAADLSLLD--DDAQLAVAKKIAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N  LRFV  ++   T  ++ L   V+ +I++GL I+GV    EM
Sbjct: 535 KTNEGLRFVNESSASATHAKMALAKTVSIVISAGLGILGVTPAQEM 580


>gi|254454733|ref|ZP_05068170.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198269139|gb|EDY93409.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 578

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/592 (44%), Positives = 377/592 (63%), Gaps = 22/592 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDC--KIKVEKKI---LD--RIVIERPRDCAHGHLSTNAAMIL 53
           M LFAD  + +      IDC   + +E  +   LD   + +E PRD +HG ++TNA M+L
Sbjct: 1   MNLFADIRATV------IDCLDALTIEGVLPAGLDFANVTVEPPRDASHGDMATNAVMVL 54

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           ++P G+ P  IA+ + A++  D  + S  IAG GF+NL L       ++S+ V++  ++G
Sbjct: 55  AKPSGMKPRDIADALAAKLVADTRITSADIAGPGFLNLALDAGVWAGVVSA-VLTDADFG 113

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           ++ +G G K+N+E++SANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND GAQ
Sbjct: 114 KSNLGAGKKMNVEYISANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGAQ 173

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ LA SV+ RY +A +       +G YPG YL   G++L  +     +   EE WL  V
Sbjct: 174 VDVLARSVYLRYLEA-HGQAVTFEDGTYPGEYLIQAGQDLKARVGDAYVGQGEEVWLDDV 232

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +++   AMM +IR+DL +L ++ D+F SE   +      I   I +L  +G +Y+G L P
Sbjct: 233 REFGTDAMMALIREDLDSLGVKMDVFYSEKSLY--GTGLIEAAIADLKTKGLIYKGTLEP 290

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           PK K  +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I
Sbjct: 291 PKGKLPEDWE-PREQTLFKSTEFGDDVDRPIQKSDGAWTYFAPDIAYHYDKISRGFDALI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G+DH GYVKR++A  AA+S+    ++V L +LV+LY+ G P KMSKRAG FI LR +
Sbjct: 350 DVFGADHGGYVKRMKAAVAALSDNAVPLDVKLTQLVKLYKKGEPFKMSKRAGTFIMLRDL 409

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           V EVG D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +   
Sbjct: 410 VAEVGPDVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVMRKAVEAGV 469

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D+  DL   ++         +EL +   LAE+PR++E A    EP+++AFYLYDLAS  H
Sbjct: 470 DVS-DLAHADL---SLATHPAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASELH 525

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G W+ G ++  LRF+Q +N   T  ++ L+ +V+ +I+ GL I+GV    EM
Sbjct: 526 GLWNRGSDDASLRFLQVDNIPATQAKIALIKSVSVVISHGLGILGVTPAEEM 577


>gi|85707713|ref|ZP_01038779.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689247|gb|EAQ29250.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 583

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/592 (44%), Positives = 374/592 (63%), Gaps = 24/592 (4%)

Query: 3   LFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L+A ++  ++  L+ +     + E      + +E PRD +HG L+TNAAM+L++P   +P
Sbjct: 7   LYAAYAGTIQTALQALVADGTLPEGTSFANVTLEPPRDPSHGDLATNAAMVLAKPAKTNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE I  ++K DP + S  IAG GF+NL L PS     L +I   G EYGR+ +G GT
Sbjct: 67  RALAEAIATKLKSDPTIVSAEIAGPGFLNLRLDPSAWLGELETITKLGDEYGRSSMGAGT 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VN+E+VSANPTGPMH+GHCR AVVGD LASL+  +G+EVTREYYINDAG Q++TLA S 
Sbjct: 127 TVNVEYVSANPTGPMHMGHCRGAVVGDALASLLELAGHEVTREYYINDAGGQVDTLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  N  ++PEGYYPG YL  +G+ LA +   +  + PEE+WLP  +  +V+ M
Sbjct: 187 HLRYREALGENIGEIPEGYYPGAYLIPIGEYLAQEVGEKYRDAPEEEWLPYFRAEAVEKM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M +I+ DL  L I HD+F SE   H  G P         L     VY+G+L  PK K   
Sbjct: 247 MDLIKSDLALLGIHHDVFASEAALHAAGKPDEAEKW---LREHDLVYDGVLEAPKGKAPP 303

Query: 301 KCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           + D +  +L LFRST  GDD DRP+ KSDG +TYF ADLAY   K     D +I + G+D
Sbjct: 304 E-DWEPVELPLFRSTKFGDDQDRPIKKSDGKWTYFGADLAYHMQKAADA-DELIDIWGAD 361

Query: 360 HSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           H+G VKR++A  AA+SE K +    +V L ++V+L R G P+KMSKR+G+FIT+  +V+E
Sbjct: 362 HAGTVKRIKAAVAALSEGKGKPTPFDVKLVQMVQLMRGGEPVKMSKRSGNFITIADMVEE 421

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFP 473
           VG D VRF ML RK    ++FDF KV E SK+NPV+YVQYA+AR +S  R+A D   + P
Sbjct: 422 VGKDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVWYVQYAHARIQSTIRKAADEEGVTP 481

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D            ++  + E+ LI   A++PR +E+A  A+EP+++AFYLYDLA+  +
Sbjct: 482 STD----------ALNQLGSDEIALIRRAAQFPREVESAAKAREPHRIAFYLYDLATDLN 531

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +S G   P  RF+  +++ LT  RL L  A+  ++ +GL ++GVE+ + M
Sbjct: 532 SFYSLGNTEPEKRFILKHDKGLTAARLFLASAIGQVLRNGLRVLGVEAVDRM 583


>gi|255263999|ref|ZP_05343341.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106334|gb|EET49008.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 579

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/557 (45%), Positives = 361/557 (64%), Gaps = 8/557 (1%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D + +E PRD AHG ++TNAAM+L++P  + P  IAE +  +++ +  +    +AG GF
Sbjct: 30  MDNVTVEPPRDAAHGDMATNAAMVLAKPAKMKPRDIAEALATKLQDENRITVAEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L+    + ++      G  YG++++G GT+VN+E+VSANPTGP+HVGH R AV GD
Sbjct: 90  LNLRLADWVWQALVKKTYDGG--YGQSIMGTGTRVNVEYVSANPTGPLHVGHVRGAVFGD 147

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LASL+A++GY+VTREYYIND GAQ++ LA SVF RY +A    +    +G YPG YL  
Sbjct: 148 ALASLLAYAGYDVTREYYINDGGAQVDVLARSVFLRYLEA-NGQEVAFEDGTYPGDYLIP 206

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +G+ L + +   L+   E  WL  V++++  AMM +IR DL AL I+ D+F SE   +  
Sbjct: 207 LGQALFEMHGDALVGKDEADWLEDVREFATDAMMNLIRSDLAALGIEMDVFYSEKSLY-- 264

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   I  L  +G +Y G L PPK K  +  +  R+Q LF+ST  GDDVDRP+ KSD
Sbjct: 265 GTGQIEKSIAELDAKGLIYRGTLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPIQKSD 323

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G++TYFA D+AY   K  R FD +I V G+DH GYVKR++A  +A+S+ +  ++V L +L
Sbjct: 324 GAWTYFAPDIAYHYDKISREFDELIDVFGADHGGYVKRMKAAVSALSDGQVPLDVKLTQL 383

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L ++G P KMSKRAG FITLR VVD+VG D  RF+ML RK    LDFDF KV EQSK+
Sbjct: 384 VKLTKNGEPFKMSKRAGTFITLRDVVDQVGPDVTRFVMLTRKQDAPLDFDFDKVTEQSKD 443

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR +S+ R+A +   D+  D    + +      +  EL L   +AE+PR+
Sbjct: 444 NPVFYVQYAHARVQSVLRKAVEANIDVSDDAL--SSVDLAGMTNEGELALAKKIAEWPRL 501

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E A    EP+++AFYLY+LA  FH  W+ G  +  LRF Q  + + T  ++ L+ A A 
Sbjct: 502 VEIAARTNEPHRIAFYLYELAGEFHALWNRGNTDESLRFFQEGDSETTQAKIALIRAAAV 561

Query: 569 IINSGLNIIGVESPNEM 585
           +I++GL I+GV   NEM
Sbjct: 562 VISAGLGILGVTPANEM 578


>gi|332187136|ref|ZP_08388876.1| arginyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012836|gb|EGI54901.1| arginyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 574

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/590 (44%), Positives = 380/590 (64%), Gaps = 22/590 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG 58
           M L+  F++ +   L  +     +    LDR  + +E PRD +HG L+TNAAM+L++P G
Sbjct: 1   MTLYTRFAAHIDAALDTLVAAGTLPGG-LDRRNVTVELPRDASHGDLATNAAMVLAKPAG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +AE I   +    +V+SV +AG GF+N+ L+ +  R  L++I  +G +YGR+  G
Sbjct: 60  TNPRALAEAIAVELGKLDEVESVSVAGPGFLNMRLTKAAWRDELAAIPQAGGDYGRSARG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G  VNIE+VSANPTGPMH+GHCR AVVGD LA+L+ F+G++V REYY+NDAG Q++ LA
Sbjct: 120 EGVTVNIEYVSANPTGPMHMGHCRGAVVGDALATLLEFAGHKVIREYYVNDAGGQVDVLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S   RY++AL     ++PEG YPG YLK VG+ LA ++ +  ++ PE +WL + +  +V
Sbjct: 180 RSAHLRYREAL-GETIEIPEGLYPGEYLKPVGEALAAEFGNAYVDAPESEWLVLFRTRAV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            AMM +IR+DL  L I HD+F SE +    G P         L  +G VY+G+L  PK +
Sbjct: 239 AAMMAMIREDLALLGIHHDLFSSEAELQAAGKPEAAE---AELRSRGLVYDGVLEAPKGE 295

Query: 298 TTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           T +  D +  +L LFRS+  GDD DRP+ KS+G++TYF ADLAY   K +   D +I + 
Sbjct: 296 TPE--DWEPVELPLFRSSQFGDDQDRPIKKSNGAWTYFGADLAYHYQKAQTA-DQLIDIW 352

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+G VKR+ A   A++  K + +V L ++VRL R G P+KMSKRAG+F+TL  VV E
Sbjct: 353 GADHAGTVKRIVAAVEALTGGKTKFDVKLVQMVRLLRGGEPVKMSKRAGNFVTLADVVRE 412

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDL 475
           VG D VRF ML R++   +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A +      
Sbjct: 413 VGKDVVRFTMLTRRSDAQMDFDFAKVVEASKDNPVFYVQYAHARIASLKRRAAEAGIEGG 472

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D DL         S  D  ++ L+   A++PR++E A +A+EP+++AFYLYDLA+ FH  
Sbjct: 473 DADL---------SLLDAEDIALVKLAAQFPRIVETAAVAREPHRIAFYLYDLAAAFHAA 523

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G + P  RF+ A +  +T  RL L   +  +I +GL ++GVE+ +EM
Sbjct: 524 WNVGNDRPDRRFLIAEDAAVTRARLFLSEGIGQVIRNGLALMGVEAVSEM 573


>gi|254436491|ref|ZP_05049985.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251937|gb|EDY76251.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 578

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/593 (45%), Positives = 375/593 (63%), Gaps = 24/593 (4%)

Query: 1   MYLFADFSSRLKNYLKEIDC-KIKVEKKILD------RIVIERPRDCAHGHLSTNAAMIL 53
           M LFAD  + +      IDC  +     +L        + +E PRD  HG ++TNAAM+L
Sbjct: 1   MNLFADIRAAV------IDCLNVLTNDGVLPAGLDFANVTVEPPRDATHGDMATNAAMVL 54

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           ++P GL P  IAE + A++  D  + S  IAG GF+NL L       ++ +++  G ++G
Sbjct: 55  AKPAGLKPRDIAEALAAKLLADRRIMSADIAGPGFLNLALDAGVWAGVVRAVLTDG-DFG 113

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           ++ +G G K+N+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q
Sbjct: 114 KSNLGTGLKINVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQ 173

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ LA SV+ RY +A +       +G YPG YL   G++L  K     +   E+ WL  V
Sbjct: 174 VDVLARSVYLRYLEA-HGQAVTFEDGTYPGEYLIKAGQDLKTKVGDAYVGQGEDVWLDDV 232

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +D+  QAMM +IR+DL  L ++ D+F SE   +      I   I +L  +G +Y+G L P
Sbjct: 233 RDFGTQAMMALIREDLDMLGVKMDVFYSEKSLY--GTGRIEAAIADLKSKGLIYKGTLEP 290

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           PK K  +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I
Sbjct: 291 PKGKLPEDWE-PREQTLFKSTDFGDDVDRPIQKSDGAWTYFAPDIAYHFDKVSRGFDALI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G+DH GYVKR++A  AA+S+    +++ L +LV+LY++G P KMSKRAG FI LR +
Sbjct: 350 DVFGADHGGYVKRMKAAVAALSDNAVPLDIKLTQLVKLYKNGEPFKMSKRAGTFIMLRDL 409

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VDEVG D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +   
Sbjct: 410 VDEVGPDVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVLRKAAEAGV 469

Query: 474 DL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           D+ D  +   ++         +EL +   LAE+PR++E A    EP+++AFYLYDLAS  
Sbjct: 470 DVGDLAIADLSLATH-----PAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASEL 524

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           HG W+ G ++  LRF+Q +N   T  ++ L+ AV+ +I+ GL+I+GV    EM
Sbjct: 525 HGLWNRGNDDASLRFLQVDNIPATQAKIALIKAVSVVISHGLSILGVTPAEEM 577


>gi|85373141|ref|YP_457203.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84786224|gb|ABC62406.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 581

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/591 (45%), Positives = 374/591 (63%), Gaps = 24/591 (4%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A F++++   L  ++ +  +   +  R + +E PRD +HG L+TNAAM+L++    +P
Sbjct: 7   IHAAFAAKVDAVLSALEAEGTLPAGVERRNVTVEPPRDPSHGDLATNAAMVLAKQAATNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE IV  ++ DPD+    IAG GFINL L+       L +I   G  YGR+ +G+G 
Sbjct: 67  RALAEKIVEHLERDPDITETAIAGPGFINLRLADRAWLGELEAIAALGEGYGRSQMGEGK 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G+EVTREYY+NDAG Q++TLA S 
Sbjct: 127 RVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEYAGHEVTREYYVNDAGGQVDTLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +   +P G YPG YLK VG+ LA +      + PE++WLPI +  +V+ M
Sbjct: 187 HLRYREALGEDIGAIPGGLYPGDYLKPVGEYLAQELGDRFKDAPEDEWLPIFRAEAVEKM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M +IR DL  L I HD+F SE      G P         L   G VY+G+L  PK K  +
Sbjct: 247 MDVIRADLALLGIHHDLFSSEAALQAAGKPEQAEAW---LREHGLVYDGVLEQPKGKVIE 303

Query: 301 KCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
             D +  +L LFRST  GDD DRP+ KSDG +TYF ADLAY   K E   D +I + G+D
Sbjct: 304 --DWEPVELPLFRSTKFGDDQDRPIRKSDGKWTYFGADLAYHMQKAEEA-DALIDIWGAD 360

Query: 360 HSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           H+G VKR++A  AA+SE + +    +V L ++V+L R G P+KMSKR+G+FIT+  +V+E
Sbjct: 361 HAGTVKRIKAAVAALSEGQGKPIPFDVKLVQMVQLMRAGEPVKMSKRSGNFITIADMVEE 420

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPD 474
           VG D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S  R+A+   I P 
Sbjct: 421 VGKDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARIHSTLRKARAEGIEPS 480

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            +        I Q  E    EL LI   A++PR++E A  A+EP+++AF+LYDLAS FH 
Sbjct: 481 TE-------AIAQLGE---EELGLIKQAAQFPRIVEAAAAAREPHRIAFFLYDLASAFHS 530

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++ G +NP  R + A +  L+  RL L+  +  +I +GL ++GVE+  EM
Sbjct: 531 FYNLGNDNPSKRVILAQDPALSAARLFLIDTIGQVIRNGLTLLGVEAVEEM 581


>gi|296114981|ref|ZP_06833625.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978443|gb|EFG85177.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 629

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/602 (44%), Positives = 380/602 (63%), Gaps = 26/602 (4%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF  + S ++  L ++   +     I+ R+ +   RD +HG L+TNAA+++++     P 
Sbjct: 34  LFVRYLSHVREALGQVVPHLP--PAIVARVEVTPTRDPSHGDLATNAALLVAKVARRKPA 91

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +   ++  P + +   AG GF+NL L+P+ L+++ + ++ +G  YG   +G G K
Sbjct: 92  DIAADLARVLESVPGITAAQAAGPGFVNLKLAPAVLQEVAAQVLRAGDSYGDGHVGDGVK 151

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L++ +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 152 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLSKAGYGVTKEYYINDAGAQVTALAWAAY 211

Query: 183 WRYQQALYNNDSD------LPEG-YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY QA+    +       +P G  Y G YL  VG+ELA ++ + L        P + W+
Sbjct: 212 WRYLQAIGTTLTQDEFAALVPGGIQYGGDYLVPVGEELAARHGTSLAADGGRPAPVDVWM 271

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V+  +V  MM +IR+DL+AL + HD+F SE      D    R  ID L  +G +YEG+
Sbjct: 272 QTVRTETVARMMAMIREDLEALGVHHDVFTSEAKI-LADGETNR-AIDRLTAKGLIYEGV 329

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG D
Sbjct: 330 LEPPKGKLPEDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIARGAD 388

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +I V G+DH GYV R++A  AA+ +  K +++VLLC++VR+ RDG P++MSKRAG F+T
Sbjct: 389 VLIDVWGADHGGYVTRMKAAVAALGQDGKPELDVLLCQIVRIVRDGQPVRMSKRAGTFVT 448

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--- 466
           LR ++DEVG D+VRF ML RK    ++FD  +V  QS++NPVFYVQYA+ARC S+ R   
Sbjct: 449 LRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCCSVLRGAA 508

Query: 467 ---QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
              QA  +  DL  +      +        +EL L+  +A++PRV+E+A IA EP+++AF
Sbjct: 509 ELAQAGRLAGDLSAEAL--AALDLSGLSSDAELALLGRMAQWPRVVESAAIAHEPHRIAF 566

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL +LA+ FH  W+ GR++  LRF+  ++ +LT  +L LV A A +I SGL ++GVE   
Sbjct: 567 YLQELAADFHALWNRGRDDATLRFLHEDDAQLTRTKLALVEATARVIRSGLRVLGVEPVK 626

Query: 584 EM 585
           EM
Sbjct: 627 EM 628


>gi|149186244|ref|ZP_01864558.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830275|gb|EDL48712.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 579

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/593 (44%), Positives = 371/593 (62%), Gaps = 30/593 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           L A F++++      ++ +  +  +  DR  + +E PRD +HG L+TNAAM+L++    +
Sbjct: 7   LHAGFAAKIDAVFNALEMEGSLPPET-DRSNVTVEPPRDPSHGDLATNAAMVLAKKAKTN 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV  +  +PD+    IAG GFINL LS     + L +I   G +YGR+ IG G
Sbjct: 66  PRALAEKIVEHLTREPDITEASIAGPGFINLCLSEQAWLRELEAIAALGADYGRSQIGGG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             VNIE+VSANPTGPMH+GHCR AVVGD LA L+ FSG+ V REYY+NDAG Q++ LA S
Sbjct: 126 KTVNIEYVSANPTGPMHMGHCRGAVVGDALAGLLEFSGHTVIREYYVNDAGGQVDVLARS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL  +   +PEG YPG YLK VG+ LA ++ +   + PE  WLP+ ++ +V A
Sbjct: 186 AHLRYREALGEDIGAIPEGLYPGDYLKPVGERLAQEFGAAYKDAPESDWLPLFRERAVAA 245

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           MM +IR+DL  L I HD+F SE      G P         L   G+VY+G+L  PK K  
Sbjct: 246 MMDMIREDLALLGIHHDLFSSEAKLQAAGKPEEAEAW---LREHGFVYDGVLEAPKGKAP 302

Query: 300 QKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            + D +  +L LFRST  GDD DRP+ KS+G++TYF ADLAY   K E   D +I + G+
Sbjct: 303 PE-DWEPVELPLFRSTEFGDDQDRPIKKSNGAWTYFGADLAYHFQKAENA-DALIDIWGA 360

Query: 359 DHSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           DH+G VKR++A  AA+++   +    +V L ++V L R+G P+KMSKRAG F+TL  VV+
Sbjct: 361 DHAGTVKRIKAAVAALTKGAGRDVPFDVKLVQMVNLVRNGEPVKMSKRAGTFVTLADVVN 420

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D VRF ML RK    ++FDF KV E SK+NPVFY+QYA+AR RS  R+A       
Sbjct: 421 EVGKDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVFYLQYAHARIRSTLRKA------- 473

Query: 476 DFDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                   V P ++  D     EL L+   A++PRV+E A  A+EP+++AF+L DLA+ F
Sbjct: 474 -------GVEPSDAHLDRLGADELALVREAAQFPRVVEAAAKAREPHRIAFFLGDLAAAF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  W+ G ++P  R +Q ++ +LT  RL +   V  +I +GL I+GVE+  EM
Sbjct: 527 HSFWNAGNDDPAKRIIQEDDAELTAARLFVAAQVGQVIRNGLGILGVEAVEEM 579


>gi|254464840|ref|ZP_05078251.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685748|gb|EDZ46230.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 581

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/586 (45%), Positives = 378/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVIDSLTAMTGEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL+L+P   + +L S++ +G ++GR+ IG 
Sbjct: 61  KPRDIAEALAAKLAADERITSAEVAGPGFLNLWLAPGIWQGVLKSVLDAGTDFGRSGIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LA+L+A++GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALAALLAYAGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  D    +G YPG YL  VG+ L DK     L+ PEE WL  V++++  
Sbjct: 181 SVYLRYLEA-HGQDIAFADGTYPGDYLVPVGQALKDKAGDAYLDQPEEVWLAEVREFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L I+ D+F SE   +      I   +  L  +G +Y+G+L PPK K  
Sbjct: 240 AMMALIREDLAQLGIEMDVFYSEKSLY--GTGKIEAALKALESKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDR + KSDG++TYFA D+AY   K ERGFD +I V G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGTWTYFAPDIAYHYDKVERGFDELIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ LC+LV+LY+DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLYKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++    +  D 
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAEE--QGIAADD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              N        D ++L +   LAE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 475 AALNAADLSLVSDPAQLAVAKKLAEWPRLVEVAARTHEPHRVAFYLYDLASELHGLYHMG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  +++  T   L L  AV+ +I++GL I+GV+   EM
Sbjct: 535 KSQEGLRFVNESSQSATHANLALAKAVSVVISAGLGILGVKPAEEM 580


>gi|240142278|ref|YP_002966788.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240012222|gb|ACS43447.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 601

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/559 (47%), Positives = 361/559 (64%), Gaps = 6/559 (1%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +RIV+E  RD AHG L+T  AM L +  G+ P  IA  +   +  DP V S  +AG GF+
Sbjct: 32  ERIVVEPTRDPAHGDLATGVAMTLGKAFGMPPSAIAAALADELAADPGVVSAAVAGPGFV 91

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L+P      + S V SG  YGR        + +EFVSANPTGPMHVGH R AVVGD 
Sbjct: 92  NVALAPEAFGDAVRSAVSSGAAYGRRPPDGTPPMVVEFVSANPTGPMHVGHGRGAVVGDA 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LASL+AF+G  V+REYY+NDAGAQ++ LA SVF RY +AL      L EG YPG YL  V
Sbjct: 152 LASLLAFAGRTVSREYYVNDAGAQVDVLARSVFVRYLEALGEKTDALGEGLYPGEYLVPV 211

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG- 268
           G+ LAD +       PE +WLP  +D +V+AMM++IR+DL+ L ++HD F SE     G 
Sbjct: 212 GQALADGHGRAHAGRPEAEWLPPFRDAAVRAMMELIREDLRLLGVRHDSFFSERSLTAGP 271

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D   + + I +L  +  V+ G LPPPK K     + DR+Q LFR+T+ GD+VDRPLLK+D
Sbjct: 272 DGDLVAETIRDLRDRDLVHVGTLPPPKGKPQDDWE-DREQTLFRATLFGDEVDRPLLKAD 330

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GSYTYFAAD+AY + K+ RG  ++I V+G+DH GYV+R+ A   A +  +A     L ++
Sbjct: 331 GSYTYFAADIAYHRSKWLRGGRHLIDVLGADHGGYVRRMAAAVGAATRGEATFEAKLVQM 390

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L RDG P++MSKR+G F+TLR VV+EVG+D+ RF ML+R++   ++FD  +V  Q+KE
Sbjct: 391 VSLVRDGQPVRMSKRSGSFVTLREVVEEVGADAFRFTMLFRRSDAQMEFDLAQVVLQAKE 450

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYP 506
           NPV+YVQY +ARCRS  RQA +  P    DL P  +   +     D  E +LI  +A++P
Sbjct: 451 NPVYYVQYGHARCRSALRQAAEAMPSA--DLSPGALAQADLGLLRDPGERELIRLVADWP 508

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           R +  A  A EP+++AF+L++ AS  H HW+ G  +P LRF+   N  +T  RL L  AV
Sbjct: 509 RQVVLAARAGEPHRIAFFLHETASRLHAHWTRGNADPALRFIVPGNVSVTRARLALAAAV 568

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+++ +GL I+GV +P+ M
Sbjct: 569 AAVLAAGLGILGVGAPDRM 587


>gi|42520278|ref|NP_966193.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652693|sp|Q73HY6|SYR_WOLPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42410016|gb|AAS14127.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 568

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/586 (45%), Positives = 372/586 (63%), Gaps = 18/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     +  +IE P +  HG + TN AM+L++    +
Sbjct: 1   MNIFKQISSLIFSKLNELKQRGVISTSAAN-FIIEPPSNRVHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGSGFINMHLKIEVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL    S + +G YPG YLK +G  LA KY +ELL   E++   +++DY++ +
Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGTGLAKKYGAELL---EKQDNQVIRDYTLSS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++II++D+  L + HD+F SE +  +     I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILEIIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K DGS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 294 NW-TSRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D
Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 473 RTG----------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            +  +RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EMS
Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLEEMS 568


>gi|103486626|ref|YP_616187.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976703|gb|ABF52854.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 575

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/564 (46%), Positives = 363/564 (64%), Gaps = 24/564 (4%)

Query: 29  LDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           LDR  + +E PRD AHG ++TNAAM+L++  G++P  +A+L+   +    +V    +AG 
Sbjct: 28  LDRSAVSVEPPRDAAHGDIATNAAMVLAKSAGMNPRALADLLAVELGALDEVVEAGVAGP 87

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFINL L+    R+ L+ I     +YGR+ +G+G +VN+E+VSANPTGPMHVGHCR AVV
Sbjct: 88  GFINLRLADDSWREELALIHDLRGDYGRSTMGQGRRVNVEYVSANPTGPMHVGHCRGAVV 147

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD LA+L+ ++G+EV REYY+NDAGAQ++ LA SV  RY++AL      +PEG YPG YL
Sbjct: 148 GDALAALLEYAGHEVIREYYVNDAGAQVDVLARSVHMRYREALGEEVGAIPEGLYPGDYL 207

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             VG++LA ++       PE  WL + +  +V AMM +IR DL  L I HDIF SE +  
Sbjct: 208 IPVGEKLAAEHGDRFAAAPESAWLALFRAEAVGAMMDMIRADLAKLGIHHDIFSSEAELQ 267

Query: 267 -RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMVGDDVDRPL 324
             G P+    +   L  QG VY+GIL  PK +T +  D +  +L LFRST  GDD DRP+
Sbjct: 268 AAGKPAAAEKL---LREQGLVYDGILEAPKGETPE--DWEPVELPLFRSTQFGDDQDRPI 322

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            KSDGS+TYF ADLAY   K E   D +I + G+DH+G VKR++A  AA++  K + +V 
Sbjct: 323 RKSDGSWTYFGADLAYHFQKSETA-DELIDIWGADHAGTVKRIKAAVAALTGGKTRFDVK 381

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++VRL ++G P KMSKRAG+F+TL  VVDEVG D+VRF ML RK    +DFDF +V E
Sbjct: 382 LVQMVRLLKNGEPFKMSKRAGNFVTLADVVDEVGKDAVRFTMLTRKADAQMDFDFARVVE 441

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            S++NPV+Y+QYA AR   + R+A D   + P            P       +EL L+  
Sbjct: 442 ASRDNPVWYLQYANARISRLRRKAADAGIVLP-----------APAPERLRANELALVKL 490

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA++PR++E A  A+EP+++AFYL D+A+ FH  ++ G ++   R V  N+ +LT  RL 
Sbjct: 491 LAQFPRIVEAAAFAREPHRIAFYLADVAAAFHAWYNLGNDDSAARIVLDNDPELTATRLY 550

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L   +  II +GL ++GVE+  EM
Sbjct: 551 LADGIGQIIRNGLQLMGVEALEEM 574


>gi|126734650|ref|ZP_01750396.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715205|gb|EBA12070.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 579

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/586 (45%), Positives = 375/586 (63%), Gaps = 9/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  +R+ + L ++  +  +   +    V +E PRD +HG ++TNAAM+L++P  +
Sbjct: 1   MNLFADMRARVLDCLDQMVAEGTLPADLATAAVSVEPPRDASHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ + A++  DP +  V +AG GF+N+ L P   + ++ +  +S   YG++ +G+
Sbjct: 61  NPRVIADALAAKLLADPQIAVVEVAGPGFLNMRLVPEVWQGVVKA-ALSDPAYGQSNLGQ 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+ +E+VSANPTGP+HVGH R AV GD LA L+ ++G++VT+EYYIND GAQ++ LA 
Sbjct: 120 GQKMMVEYVSANPTGPLHVGHTRGAVFGDALARLLDYAGFDVTKEYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   P+G YPG YLK VGK L  K     ++  E+ WL  +++++ +
Sbjct: 180 SVYLRYLEA-HGQEVAFPDGTYPGDYLKPVGKALKAKVGDAYVDKGEQYWLEEIREFATE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L +  D F SE   +      I   I  L  +G +Y G L PPK K  
Sbjct: 239 AMMDLIRADLAQLGVVMDNFYSEKSLY--GTGLIEKAIAELDEKGLIYRGTLEPPKGKMP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDGS+TYFA D+AY   K +RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGSWTYFAPDIAYHYDKVQRGFDQLIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  ++V L +LV+LY++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 356 HGGYVKRMKAAVSALSDGKVPLDVKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +  RF ML RKN   LDFDF KV EQSK+NPVFYV YAYAR  S   +A       D  L
Sbjct: 416 NVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVNYAYARVNSAVGKAGAFTDVSDVTL 475

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              ++     E   +EL +I  LAE+PR++E A    EP+++AFYLYDLAS FH  +  G
Sbjct: 476 ADVDLSGLTHE---AELAVIRKLAEWPRLVEIAARGHEPHRIAFYLYDLASDFHALYHQG 532

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  LRFVQ  + + T  ++ L+ AVA +I  GL I+GV    EM
Sbjct: 533 NADEALRFVQEGDSETTQAKIALIRAVAIVILHGLGILGVTPAEEM 578


>gi|89068216|ref|ZP_01155626.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89046133|gb|EAR52191.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 580

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/586 (44%), Positives = 373/586 (63%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +     +   +    + +E PRD AHG ++TNAAM+L++P G+
Sbjct: 1   MNLFADIRALVVDRLAALAADGTIPDGLDTANVAVEPPRDPAHGDMATNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + AR+  DP +    +AG GF+N+ L+    + ++   V+    YGR+ +G 
Sbjct: 61  KPRDIADALAARLADDPRIALAEVAGPGFLNIRLADGVWQDLVRQ-VLRDDSYGRSDMGA 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+EFVS NPTGPMH+GH R A  GD LASL+ ++G+EVTREYYIND GAQ++ LA 
Sbjct: 120 GEKVNVEFVSVNPTGPMHLGHVRNAAFGDALASLLDYAGHEVTREYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  +     ++  E+ WL  V+++S  
Sbjct: 180 SVYLRYLEA-HGREVRFEDGTYPGDYLVAVGEALKAEVGDAYVDQNEDVWLKHVREFSTD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++I+DDL AL +  D + SE   +      I   I++L  +G +Y+G L PPK K  
Sbjct: 239 RMMQVIKDDLAALGVVMDNYFSEKSLY--GTGKIEGAIESLRDKGLIYKGTLEPPKGKVP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP++KSDG++TYFA D+AY   K ERGF  +I V+G+D
Sbjct: 297 EDWE-PREQTLFRSTAHGDDVDRPIMKSDGTWTYFAPDIAYHHDKLERGFTQLIDVLGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  ++V L +LV+LY++G P KMSKRAG F+TL  VVD VG 
Sbjct: 356 HGGYVKRMKAAVSAMSDGQVPLDVKLIQLVKLYKNGEPFKMSKRAGTFVTLADVVDMVGP 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A +    +D + 
Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAAE--EGIDTET 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        SEL L   LAE+PR++E A    EP+++AFYLY+LAS  H  W+ G
Sbjct: 474 ATLAEVDLSGLTHESELALAKKLAEWPRLVEIAARTHEPHRVAFYLYELASELHALWNKG 533

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            E+  LRF+Q  +   T  ++ L  A A +I++GL I+GV   +EM
Sbjct: 534 NEDHSLRFLQEGDAAATQAKIALPRAAAIVISAGLGILGVTPVDEM 579


>gi|148259959|ref|YP_001234086.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401640|gb|ABQ30167.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 596

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/576 (44%), Positives = 365/576 (63%), Gaps = 18/576 (3%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           ++ ++  RI +   R+ AHG ++TNAA+I ++PLG  P  IA  + A +   PD+     
Sbjct: 24  LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPPREIATALAAALSALPDIAKAEP 83

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+NL L+       +++I+ +G  +G + +G+G +VN+E+VSANPTGP+ VGHCR 
Sbjct: 84  AGPGFVNLTLADPVWHAEIAAILRAGEAFGASAMGQGRRVNVEYVSANPTGPLTVGHCRG 143

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD------LP 197
           AVVGD LASL+A +GY+VTREYYINDAGAQ+  LA SV+WRY QAL    ++       P
Sbjct: 144 AVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSVYWRYLQALGTQLTEQDFAAATP 203

Query: 198 EGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            G  YPG YL  V + L   +   L        P E WL  V+ +++++MM +IR+DL A
Sbjct: 204 TGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAWLDTVRRHAIESMMALIREDLAA 263

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           LN++ D+F SE            + I  L  Q  +YEG+L PPK KT +  +  R+Q LF
Sbjct: 264 LNVRQDVFTSEAALIAAGGVERAEAI--LRGQDLLYEGVLEPPKGKTPEDWE-PREQTLF 320

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AV 370
           R+T  GDDVDRP+ KSDGS TYF  D+A    K  RGFD MI V G+DH GYVKR++ AV
Sbjct: 321 RATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGFDTMIDVWGADHGGYVKRMQAAV 380

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            A  + + A ++++LC++VR+ +DG P++MSKRAG +I LR ++D VG D VRF+ML RK
Sbjct: 381 KALAAGRDASLDIVLCQIVRVMKDGTPMRMSKRAGTYIELRDLIDAVGPDVVRFIMLMRK 440

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQES 489
           +   ++FD      Q++ENPVFYVQYA+ARCRS+ R A ++ P+L D            S
Sbjct: 441 SDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAAAEM-PELGDTADAALAEAALAS 499

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                EL L+  LA +PR++E+A  A+EP+++ F+LYDLA  FH  W+ GR +  LRF+Q
Sbjct: 500 LTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDLAGDFHALWNAGRADATLRFIQ 559

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+  + +  RL LV A A +I SGL ++GV    EM
Sbjct: 560 ADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595


>gi|326388873|ref|ZP_08210455.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206473|gb|EGD57308.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 589

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/591 (44%), Positives = 358/591 (60%), Gaps = 24/591 (4%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           LFA+F++ +   L  ++    +   +    +  E PRD AHG L+TNAAM+L++P G +P
Sbjct: 15  LFAEFAAVIDAALNALETAGTLPGGLARGAVTTEPPRDPAHGDLATNAAMVLAKPAGTNP 74

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A  +VA ++ DP V +  IAG GFINL L P      L  I   G +YGR+ +G G+
Sbjct: 75  RALATALVAELEKDPRVTAAEIAGPGFINLRLVPGAWLDELGLISALGADYGRSTVGGGS 134

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+G++V REYYINDAG Q++ LA SV
Sbjct: 135 IVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGHKVVREYYINDAGGQVDVLARSV 194

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +   +PEG YPG YL  VG+ LA ++       PE  WL + +  +V AM
Sbjct: 195 HLRYREALGQDVGAIPEGLYPGDYLVPVGQALAAEFGDRYAAAPEADWLVLFRTRAVAAM 254

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR DL  L I HD+F SE +               L     VY+G L  PK K    
Sbjct: 255 MDMIRADLALLGIHHDVFSSEAELQA--AGKPAAAEAWLREHDLVYDGQLEAPKGKVAD- 311

Query: 302 CDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
            D +  +L LFRST  GDD DRP+ KSDGS+TYF ADLAY   K E   D ++ + G+DH
Sbjct: 312 -DWEPVELPLFRSTRFGDDQDRPIRKSDGSWTYFGADLAYHFQKAETA-DALVDIWGADH 369

Query: 361 SGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +G VKR++A  AA++  + +     + L ++V+L RDG P+KMSKRAG F+TL  VV EV
Sbjct: 370 AGTVKRIKAAVAALTGAQGKPKPFEIKLVQMVQLLRDGQPVKMSKRAGTFVTLADVVREV 429

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D VRF ML RK    +DFDF KV E SK+NPVFYVQY +AR  S  R+A         
Sbjct: 430 GKDVVRFTMLTRKPDAQMDFDFAKVVEASKDNPVFYVQYCHARVCSTLRKAAG------- 482

Query: 478 DLFPRNVIPQESE---FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                   P  +E       EL LI   A++PR++E A  A+EP+++AF+LYDLA+ FH 
Sbjct: 483 ----EGFAPNAAELALLGDEELALIRLAAQFPRIVEGAAAAREPHRIAFFLYDLAAGFHA 538

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +W+ G + P  R++ A+N  LT  RL L   V  ++ +GL I+GV +  E+
Sbjct: 539 YWNLGNDRPDKRYIVADNPALTGARLFLAAQVGQVVRNGLAILGVTAAEEL 589


>gi|326403086|ref|YP_004283167.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325049947|dbj|BAJ80285.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 596

 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/576 (44%), Positives = 366/576 (63%), Gaps = 18/576 (3%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           ++ ++  RI +   R+ AHG ++TNAA+I ++PLG  P  IA  + A +   PD+     
Sbjct: 24  LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPPREIATALAAALSALPDIAKAEP 83

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+NL L+       +++I+ +G  +G + +G+G +VN+E+VSANPTGP+ VGHCR 
Sbjct: 84  AGPGFVNLTLTDPVWHAEIAAILRAGEAFGASAMGQGRRVNVEYVSANPTGPLTVGHCRG 143

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------YNNDSDLP 197
           AVVGD LASL+A +GY+VTREYYINDAGAQ+  LA SV+WRY QAL      ++  +  P
Sbjct: 144 AVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSVYWRYLQALGTQLTEHDFAAATP 203

Query: 198 EGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            G  YPG YL  V + L   +   L        P E WL  V+ +++++MM +IR+DL A
Sbjct: 204 TGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAWLDTVRRHAIESMMALIREDLAA 263

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           LN++ D+F SE            + I  L  Q  +YEG+L PPK KT +  +  R+Q LF
Sbjct: 264 LNVRQDVFTSEAALIAAGGVERAEAI--LRGQDLLYEGVLEPPKGKTPEDWE-PREQTLF 320

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AV 370
           R+T  GDDVDRP+ KSDGS TYF  D+A    K  RGFD MI V G+DH GYVKR++ AV
Sbjct: 321 RATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGFDTMIDVWGADHGGYVKRMQAAV 380

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            A  + + A ++++LC++VR+ +DG P++MSKRAG +I LR ++D VG D VRF+ML RK
Sbjct: 381 KALAAGRDATLDIVLCQIVRVMKDGTPMRMSKRAGTYIELRDLIDAVGPDVVRFIMLMRK 440

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQES 489
           +   ++FD      Q++ENPVFYVQYA+ARCRS+ R A ++ P+L D            S
Sbjct: 441 SDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAAAEM-PELGDTVDAALAEAALAS 499

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                EL L+  LA +PR++E+A  A+EP+++ F+LYDLA  FH  W+ GR +  LRF+Q
Sbjct: 500 LTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDLAGDFHALWNAGRADATLRFIQ 559

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+  + +  RL LV A A +I SGL ++GV    EM
Sbjct: 560 ADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595


>gi|162148009|ref|YP_001602470.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786586|emb|CAP56168.1| Arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 597

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/605 (44%), Positives = 371/605 (61%), Gaps = 35/605 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF  + S +++ L+ I   +  E  +  R+ +   RD AHG ++TNAA++ ++     P 
Sbjct: 5   LFVRYLSHVRDALRRIVPDLPDE--VAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  + A +   P V     AG GF+N+ L  + LR I+ +++ +G  YG   +G+G +
Sbjct: 63  EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDATLGQGVR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182

Query: 183 WRYQQALYNNDSD------LPEG-YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY Q +            +P G  Y G YL  VG+ LA+ + + L          E WL
Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGQALAEAHGTALAEPGAQPAAPEHWL 242

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEG 289
           P VK + V  MM +IR DL AL ++HD+F SE          I D  I  L  QG +YEG
Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKIL---ADGITDRAIARLDAQGLLYEG 299

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +L PPK K  +  +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG 
Sbjct: 300 VLEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKILRGA 358

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKRAGDF 407
           D +I V G+DH GYV R++A   A+ E    +  +VLLC++VR+ RDG P++MSKRAG F
Sbjct: 359 DLLIDVWGADHGGYVTRMKAAVKALGEDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTF 418

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +TLR ++DEVG D+VRF ML RK    ++FD  +V  Q+++NPVFYVQYA+ARCRS+ R 
Sbjct: 419 VTLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRA 478

Query: 468 AKDIFPDLDFDLFPRNVIP---QESEFDT----SELQLIVHLAEYPRVIENATIAQEPYK 520
           A+++       L  R+V P    ++  D     +EL L+  +A++PR +E A  A EP++
Sbjct: 479 AQEM-------LGARDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHR 531

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +AFYL +LA  FH  W+ GR++  LRF+Q ++   T  +L LV A A++I SGL ++GV 
Sbjct: 532 IAFYLGELAGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVT 591

Query: 581 SPNEM 585
              EM
Sbjct: 592 PVEEM 596


>gi|209542625|ref|YP_002274854.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530302|gb|ACI50239.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 597

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/598 (43%), Positives = 365/598 (61%), Gaps = 21/598 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF  + S +++ L+ I   +  E  +  R+ +   RD AHG ++TNAA++ ++     P 
Sbjct: 5   LFVRYLSHVRDALRRIVPDLPDE--VAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  + A +   P V     AG GF+N+ L  + LR I+ +++ +G  YG   +G+G +
Sbjct: 63  EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDAALGQGVR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182

Query: 183 WRYQQALYNNDSD------LPEG-YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY Q +            +P G  Y G YL  VG+ LA+ + + L          E WL
Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGRALAEAHGTALAEPGAQPAAPEHWL 242

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEG 289
           P VK + V  MM +IR DL AL ++HD+F SE          I D  I  L  QG +YEG
Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKIL---ADGITDRAIARLDAQGLLYEG 299

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +L PPK K  +  +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG 
Sbjct: 300 VLEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKIRRGA 358

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKRAGDF 407
           D +I V G+DH GYV R++A   A+ +    +  +VLLC++VR+ RDG P++MSKRAG F
Sbjct: 359 DLLIDVWGADHGGYVTRMKAAVKALGKDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTF 418

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +TLR ++DEVG D+VRF ML RK    ++FD  +V  Q+++NPVFYVQYA+ARCRS+ R 
Sbjct: 419 VTLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRA 478

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A+++    D           +     +EL L+  +A++PR +E A  A EP+++AFYL +
Sbjct: 479 AQEMLGAQDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHRIAFYLGE 538

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  FH  W+ GR++  LRF+Q ++   T  +L LV A A++I SGL ++GV    EM
Sbjct: 539 LAGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVTPVEEM 596


>gi|225630185|ref|YP_002726976.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|225592166|gb|ACN95185.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 568

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/586 (44%), Positives = 369/586 (62%), Gaps = 18/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + IV E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKRASSLILSKLNELKQRGIINTDTTNFIV-EPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL    S + +G YPG YLK +G+ LA KY  E L   + +   I+++Y++  
Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++D+  L + HD+F SE +  +     I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K  GS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 294 NW-TSRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D
Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 473 RTG----------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            +  +RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EMS
Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 568


>gi|218662749|ref|ZP_03518679.1| arginyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 401

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 229/403 (56%), Positives = 307/403 (76%), Gaps = 4/403 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+S++ SGI+YGR+ +G
Sbjct: 60  SNPRALADIIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIASGIDYGRSTLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+  A
Sbjct: 120 EGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVFA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++
Sbjct: 180 PLGLLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTI 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK + 
Sbjct: 240 SAMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+
Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           DH GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMS
Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMS 401


>gi|58584465|ref|YP_198038.1| arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75498018|sp|Q5GT78|SYR_WOLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|58418781|gb|AAW70796.1| Arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 565

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/585 (43%), Positives = 368/585 (62%), Gaps = 21/585 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS +   L ++D K+K     +   ++E P + AHG + TN AM+L++     
Sbjct: 1   MNIFKRISSLI---LSKLD-KLKQGVSSVTNFIVEPPSNRAHGDIYTNIAMVLAKHEKKK 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++     +  ++  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 57  PVEIAEVLAKEFALFDEIARVEIAGPGFINMHLKIEVWHGILEQINELKTEFGTLNIGNN 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD L +L+   GY VT+EYYINDAGAQI+TL  S
Sbjct: 117 QAINVEFVSANPTGPLHIGHARGAVFGDVLTNLLKKVGYRVTKEYYINDAGAQIDTLVRS 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL    S + +G YPG YLK +G+ELA KY  ELL   + +   ++++Y++ +
Sbjct: 177 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEELAKKYGRELLEKQDNR---VIREYTLSS 232

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++ +  L + HD+F SE +  +     I   I  L+ +G VYEG L  PKSK ++
Sbjct: 233 ILELIKEGMNLLGVSHDVFTSEYELQKS--GKIEKSIKLLSDKGLVYEGYLEKPKSKESE 290

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K DGS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 291 NW-TSRKEMLFRSTEFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVALGSDH 349

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T+R VV+EVG D
Sbjct: 350 GGYIKRLKAVISALSDNQAKIEVKLHNVVNFFENGKPVKMSKRSGNFLTVRDVVEEVGRD 409

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+ R  S+ R A    P  +  L 
Sbjct: 410 ITRFIMLTRKNDMVLDFDFTKVKEQSKDNPIFYVQYAHVRAHSLMRNAPKELPKANPSLL 469

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             N           EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 470 KTN----------GELFLIKTLAKWPDVVETAARLCEPHRITFYLLEVAEAFHILWGYGK 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +RF+  +N  LT  R+ LV A+  +I SGL++  +E   EM
Sbjct: 520 SDLNMRFILEDNPNLTAARMFLVQALVHVIASGLSMFNIEPLEEM 564


>gi|190571604|ref|YP_001975962.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019007|ref|ZP_03334814.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238065093|sp|B3CNF3|SYR_WOLPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190357876|emb|CAQ55335.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995116|gb|EEB55757.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 566

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/585 (44%), Positives = 367/585 (62%), Gaps = 20/585 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  V     +  ++E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKQISSLISSKLNELKQR-GVINTSAENFIVEPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA ++    K   +V  V IA  GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAGILAREFKPFDEVAEVEIASPGFINMHLKIEVWHGILKQINELKTEFGTLNIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             VN+EFVSANPTGP+H+GH R AV GD LA+L+   GY VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAVNVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYNVTKEYYINDAGAQIDTLIRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL    S + +G YPG YLK +G+ LA KY  EL     E+   I+++Y++ +
Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEL---RAEEDNQIIREYTLSS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++D+  L + HD+F SE +  RG    I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILELIKEDMSLLGVNHDVFTSEYEL-RG---KIEESIKILSDKGLVYEGYLEKPKGKESE 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K DGS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 292 NW-TSRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 350

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +  P+KMSKR+G+F+T R VV+EVG D
Sbjct: 351 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENEKPVKMSKRSGNFLTARDVVEEVGRD 410

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 411 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 470

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +           EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 471 KTD----------GELFLIKILAKWPDVVEIAARLYEPHRITFYLLEVAEAFHVLWGYGK 520

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EM
Sbjct: 521 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEM 565


>gi|103485609|ref|YP_615170.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98975686|gb|ABF51837.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 580

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/584 (44%), Positives = 359/584 (61%), Gaps = 20/584 (3%)

Query: 9   SRLKNYLKEIDCKIKVEKKI---LDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +R+ ++L  +   ++V   +   LDR  + +ERP D AHG LSTNAAM+L++  G  P  
Sbjct: 7   ARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHPRQ 66

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AE +  R+ +  DV  V +AG GF+N+ L+    +  L+ I      YG + +G G  V
Sbjct: 67  LAEKLAGRLAMLEDVADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGKTV 126

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           NIEFVSANPTGPMH+GHCR AVVGD LA+L+AF+G+ V REYYINDAG Q++ LA S   
Sbjct: 127 NIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDILARSAHQ 186

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY++AL  +  ++ EG YPG YLK VG+ LA  +     + PE  WL I +  +V AMM+
Sbjct: 187 RYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRARTVAAMME 246

Query: 244 IIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            IR+DL  L I HD F SE D    G P    D    L  +  VY+G+L PPK + ++  
Sbjct: 247 TIREDLALLGISHDRFASEADLVAAGKPD---DAEAWLRERDLVYDGVLEPPKGEVSK-- 301

Query: 303 DMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D +   L LFRST  GDD DRP+ K DGS+TYF  DLAY   K  R  D +I + G+DH+
Sbjct: 302 DWEPIALPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEK-ARDADELIDIWGADHA 360

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G V R+ A A A++E + + +V L ++VRL R G P+KMSKRAG+F+TL  V+ EVG D 
Sbjct: 361 GTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVIREVGKDV 420

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRFMML RK    +DFDF  V E SK+NPVFYVQYA+AR  S+  +A +   +L      
Sbjct: 421 VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIEL------ 474

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
               P  +  D   L L+   AE+PR++E A  A+EP+++AF+L  LA+ FH  W+ G  
Sbjct: 475 -GDPPDLALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNA 533

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P  RF    N  ++  RL L  A+  +I +GL ++GVE  +EM
Sbjct: 534 DPTRRFAYPENLPVSRARLFLAAAIGQVIRNGLALMGVEPTHEM 577


>gi|58699209|ref|ZP_00374017.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534275|gb|EAL58466.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 568

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/586 (44%), Positives = 365/586 (62%), Gaps = 18/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + IV E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKRASSLILSKLNELKQRGIINTDTTNFIV-EPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL    S + +G YPG YLK +G+ LA KY  E L   + +   I+++Y++  
Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++D+  L + HD+F SE +  +     I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K  GS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 294 NW-TSRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D
Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 473 RTG----------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            +  +RF+  +N  LT        A+A +I SGL+I  +E   EMS
Sbjct: 523 SDLNMRFILEDNLNLTAAVCFSCRALAHVIASGLSIFNIEPLKEMS 568


>gi|239946988|ref|ZP_04698741.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921264|gb|EER21288.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 576

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/566 (43%), Positives = 361/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTATIETPKDSFNGDLSSNIAMIIAAKESISPREVALKFKEVLITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPVGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL   + +   IVK+++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNDAEKFKIVKNFAVEKMLDLNRKDLANLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I   +  L R G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHEEWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+D S++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ ++  +++V +
Sbjct: 318 KADRSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEHVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F      + S++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPE-SYNSF------EASKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +T   EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLAAWTKTLEASTKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576


>gi|91206117|ref|YP_538472.1| arginyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157826450|ref|YP_001495514.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|109895031|sp|Q1RGY1|SYR_RICBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232833|sp|A8GUI1|SYR_RICB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91069661|gb|ABE05383.1| Arginyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157801754|gb|ABV78477.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 576

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/577 (42%), Positives = 358/577 (62%), Gaps = 5/577 (0%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++LK+ +     ++    +I +   IE P+D  +G LS+N AMI++    + P  +A   
Sbjct: 5   NKLKHDIITASTQLYNNSEIANHASIETPKDSFNGDLSSNIAMIIAAKKNVPPREVALKF 64

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +   P + S+ IAG GFIN  +        +  I+ +  ++    + K   +NIE+V
Sbjct: 65  KEILNELPYIASIEIAGPGFINFTIKADSWHTAIKDILQNESKFFEIDVDKNKNINIEYV 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGPMH+GH R AV GD LA+++   GY VT+EYY+NDAG+QIN L  +V  RY++A
Sbjct: 125 SANPTGPMHIGHARGAVYGDVLANILKKVGYPVTKEYYVNDAGSQINDLVSTVILRYREA 184

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L      + EG YPG YL  VG+ LA +Y  +LLN  E +   IVK++++Q M+ + ++D
Sbjct: 185 L-GEKITITEGLYPGEYLIPVGQALAKEYGDKLLNMDELERFKIVKNFAIQKMLDLNKED 243

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           LK L ++HD+F SE   H  D   I   +  L   G +YEG +P PK K   + + +R Q
Sbjct: 244 LKELGVKHDVFFSEQTLH--DNGKIEKTVKLLTDMGLIYEGSVPAPKGKVHAEWE-NRTQ 300

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            LF+ST  GDD DRP+ K+DGS+TYFA+DLAY K K +RG +++IYV+G+DHSGYVKR+E
Sbjct: 301 ELFKSTKYGDDQDRPIRKADGSWTYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIE 360

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML 
Sbjct: 361 ATVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGTFASVQDVNHEVGKDIIRFMMLT 420

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R+N++ LDFD  KVKEQSKENP+FYVQYA+ R  SI  +A +  P   ++ F        
Sbjct: 421 RENNKTLDFDLIKVKEQSKENPIFYVQYAHVRTLSILSKAMETIPQ-SYNSFEAGTYDLS 479

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                 E+++I  LA + + +E A    EP+++AFYL +LAS FH  W+ G+EN   RF+
Sbjct: 480 LLSSEEEIEIIKLLASWTKTLETAAKYFEPHRVAFYLINLASKFHALWNFGKENNDYRFI 539

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             NN +LT  RL L  A+  II SGL +IGVE    M
Sbjct: 540 IENNVELTTARLALAKAIQKIIASGLEVIGVEPMTRM 576


>gi|157964131|ref|YP_001498955.1| arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157843907|gb|ABV84408.1| Arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 578

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 24  QEIANTATIETPKDSFNGDLSSNIAMIIAAKESISPREVALKFKEVLITLPYIASIEIAG 83

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 84  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 143

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 144 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQMTIPAGLYPGEY 202

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL   + +   I+K ++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 203 LIPLGQILAKEYGNKLLTMNDAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 262

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I   +  L R G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 263 H--DKGEIEATVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIA 319

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 320 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 379

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 380 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 439

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F      +  ++D S      E+++I
Sbjct: 440 SRENPIFYVQYAHVRTISILSKARELMPE-SYNHF------EAGKYDLSLLSSEEEIEII 492

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E A    EP+++AFYL +LAS  H  W+ G+EN   RFV  +N++LT+ R
Sbjct: 493 KLLASWTKTLEAAAKYFEPHRIAFYLINLASKVHSMWNFGKENSDYRFVIESNKELTLAR 552

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 553 LALASAIRKVIASGLEVIGVEPMNKM 578


>gi|67458501|ref|YP_246125.1| arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75537032|sp|Q4UN98|SYR_RICFE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|67004034|gb|AAY60960.1| Arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 576

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 361/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTANIETPKDNFNGDLSSNIAMIIAAKESISPREVALKFKEVLTTLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKAESWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYREAL-GEKITIPAGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL   E +   IVK+++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNENERFKIVKNFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I   +  L   G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEGTVKLLTGMGLIYEGTLPAPKGKVHEEWD-NRVQKLFKSTNYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G+F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F      +E ++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPE-SYNNF------EEGKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASRFHSMWNFGKENSDYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  + M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMDRM 576


>gi|34580946|ref|ZP_00142426.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262331|gb|EAA25835.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 576

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSKNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++    Y VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL     +   I+K ++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I + +  L R G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +AK++ P+  ++ F      +  ++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576


>gi|238650531|ref|YP_002916383.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511656|sp|C4K184|SYR_RICPU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238624629|gb|ACR47335.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 576

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 360/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTATIEIPKDSFNGDLSSNVAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++    Y VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL     +   IVK ++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIVKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I + +  L R G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G+F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F      +  ++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELIPE-SYNNF------ESGKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576


>gi|15892018|ref|NP_359732.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|21542254|sp|Q92JH2|SYR_RICCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15619134|gb|AAL02633.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 576

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++    Y VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL     +   I+K ++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I + +  L R G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +AK++ P+  ++ F      +  ++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576


>gi|229586306|ref|YP_002844807.1| arginyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511655|sp|C3PMA4|SYR_RICAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|228021356|gb|ACP53064.1| Arginyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 576

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R A+
Sbjct: 82  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSKNINIEYVSANPTGPMHIGHARGAI 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++    Y VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL     +   I+K ++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I + +  L R G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +AK++ P+  ++ F      +  ++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576


>gi|157803251|ref|YP_001491800.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166232834|sp|A8EXD2|SYR_RICCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157784514|gb|ABV73015.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 576

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/564 (43%), Positives = 359/564 (63%), Gaps = 13/564 (2%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I + + IE  +D  +G LS+N AMI++    + P T+A      +   P + S+ IAG
Sbjct: 22  QEIANIVTIETSKDNFNGDLSSNIAMIIAAKENMPPRTVALKFKEILITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  + +I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKAESWQIAIKNILQHEGKFFEIDIDKNKYINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVGYNVTKEYYVNDAGSQINDLVSTVLLRYREAL-GEKITIPVGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  VG+ L  +Y ++LL   EE+   IVK+++V+ M+ + R DL+ L I+HD+F SE   
Sbjct: 201 LIPVGQILVKEYGNKLLVMDEEERFKIVKNFAVEKMLDLNRKDLEELGIKHDLFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I +I+  L   G +YEG LP PK K   K D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGKIEEIVKLLTNMGLIYEGTLPAPKGKIHAKWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGKEQIKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G+F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFIENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVH 501
           S+ENP+FYVQYA+ R  SI  +A ++ P+     +  ++  +++  E E D  +L     
Sbjct: 438 SRENPIFYVQYAHVRTVSILSKAMELMPESYSSFEAGIYDLSLLSSEEEIDIIKL----- 492

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA + + +E +    EP+++A YL +LAS FH  W+ G+EN   RFV  NN++LT  RL 
Sbjct: 493 LAAWTKTLEVSAKYFEPHRIALYLINLASKFHSIWNFGKENSDYRFVIENNKELTTARLA 552

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A+  +I SG  +IGVE  N+M
Sbjct: 553 LAKAIQKVIASGFEVIGVEPMNKM 576


>gi|58040184|ref|YP_192148.1| arginyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81351656|sp|Q5FQ54|SYR_GLUOX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|58002598|gb|AAW61492.1| Arginyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 602

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/574 (43%), Positives = 355/574 (61%), Gaps = 20/574 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++++ R+ +   RD +HG ++TNAAM+ ++P    P  IA  +V ++   P+V     AG
Sbjct: 34  EEVVQRVDLTPTRDPSHGDMATNAAMLAAKPARRKPAEIAAELVDKLFALPEVAKAEAAG 93

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GF+NL L P  L+ +  SI+ +G +YGR+ +G+GT+VN+E+VSANPTGPMHVGHCR AV
Sbjct: 94  PGFVNLTLKPEVLQGVAVSILKAGDQYGRSTMGQGTRVNVEYVSANPTGPMHVGHCRGAV 153

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD------LPEG 199
           VGD LA+L+  +G  VTREYYINDAG Q+  L  + +WRY Q +    S        P G
Sbjct: 154 VGDALANLLEAAGNTVTREYYINDAGTQVVALTWATYWRYLQVIGTEISADDFSPLTPNG 213

Query: 200 Y-YPGVYLKHVGKELADKYSSELLNF---PEEK--WLPIVKDYSVQAMMKIIRDDLKALN 253
             Y G YL  V + +ADK+   L N    P +   W   V+  ++  MM  IR+DL+AL 
Sbjct: 214 LQYQGEYLIPVAQSIADKHGRALANADGGPADPSVWFETVRREALTQMMAAIREDLEALG 273

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I H++F SE +        +   I  L  +G +YEG+L PPK K  +  +  R Q LFRS
Sbjct: 274 ISHEVFASEAETLAS--GRVDAAIAKLDSKGLLYEGVLEPPKGKMPEDWEA-RPQTLFRS 330

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           T  GDD DR L KSDG+ TYFA D+ Y   K E   D +I V+G+DH GYV R+ A  +A
Sbjct: 331 TEFGDDQDRALRKSDGTNTYFANDIGYHAQKAENA-DVLIDVLGADHGGYVSRMRAAISA 389

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +++ K    V++C++VR+ ++G P++MSKRAG F+TLR ++DEVG D+VRF ML RK   
Sbjct: 390 LTDGKTGFEVVMCQIVRVVKNGEPVRMSKRAGTFVTLRDLLDEVGRDAVRFTMLTRKADA 449

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            ++FD   V  Q+++NPVFYVQYA+ARCRS+ R A+ +F      + P  +   +    +
Sbjct: 450 QMEFDLDAVVAQTRDNPVFYVQYAHARCRSVLRSAETMFG--ADTVTPEALCSADLSNLS 507

Query: 494 SELQLIV--HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           S+++L V   LA +PR +E A  A+EP+++A Y  DLAS FH  W+ GRE+  LRF+  N
Sbjct: 508 SDVELAVLRRLAAFPRSVEAAATAREPHRIATYCIDLASDFHALWNRGREDTTLRFLHEN 567

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +R  ++ +L LV A+A  +   L I+GV    EM
Sbjct: 568 DRATSLAKLALVSAIAGTLRCALTILGVVPVEEM 601


>gi|157825222|ref|YP_001492942.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166232832|sp|A8GM09|SYR_RICAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157799180|gb|ABV74434.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 576

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/562 (43%), Positives = 361/562 (64%), Gaps = 9/562 (1%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANNATIETPKDNFNGDLSSNIAMIIAAKENISPREVALKFKEILITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKAETWQIAIKDILQHEEKFCEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++AL    + +P+G YPG Y
Sbjct: 142 YGDVLARILQKVGYFVTKEYYVNDAGSQINDLVSTVLLRYREALGETIT-IPDGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA++Y ++LL   EE+   IVK+++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAEEYGNKLLMMDEEERFKIVKNFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I + +  L   G +YEGILPPPK K   + D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKCAIEETVKLLTGMGLIYEGILPPPKGKVHDEWD-NRVQKLFKSTNYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K +RG  ++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGVSHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLA 503
           S+ENP+FYVQYA+ R  SI  +A+++ P+   +F+    ++    SE    E+ +I  LA
Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPESYNNFEACKYDLSLLSSE---EEIAIIKLLA 494

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            + + +E +    EP+++AFYL +LAS FH  W+ G+E+   RF+  +N++LT  RL L 
Sbjct: 495 SWTKTLETSAKYFEPHRIAFYLINLASKFHSMWNFGKEHSDYRFIIESNKELTTARLALA 554

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A+  +I SGL +IGVE  + M
Sbjct: 555 TAIQKVIASGLEVIGVEPMDRM 576


>gi|15603944|ref|NP_220459.1| arginyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226193|sp|Q9ZE81|SYR_RICPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3860635|emb|CAA14536.1| ARGINYL-TRNA SYNTHETASE (argS) [Rickettsia prowazekii]
 gi|292571662|gb|ADE29577.1| Arginyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 576

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/574 (42%), Positives = 360/574 (62%), Gaps = 9/574 (1%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++LK  +     K+   K+I +   IE P+D  +G LS+N AMI++    + P  +A   
Sbjct: 5   NQLKQDIIAASQKLYNNKEIANTATIETPKDSFNGDLSSNIAMIIASKESIAPREVALKF 64

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +   P + S+ IAG GFIN  +     +  +  I+    ++    I K + +NIE+V
Sbjct: 65  KEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKNSNINIEYV 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++A
Sbjct: 125 SANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEA 184

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L      +P G YPG YL  +G+ L+ +Y ++LL   + +   I+K ++V+ M+ + R D
Sbjct: 185 L-GEPITIPVGLYPGEYLIPLGEILSKEYGNKLLTMNDVERFKIIKSFAVEKMLDLNRKD 243

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  L I+HD+F SE   +  D   I   +  L R G +YEG LP PK K  +  +  R Q
Sbjct: 244 LADLGIKHDVFFSEQSLY--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHEDWEY-RVQ 300

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+E
Sbjct: 301 KLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIE 360

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A+  A+ ++K +++V +C+LV    +G+PIKMSKR G F +++ V  EVG D +RFMML 
Sbjct: 361 AIVKALGQEKVKVDVKICQLVNFVENGVPIKMSKRLGSFASVQDVNKEVGKDIIRFMMLT 420

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIP 486
           R+N + LDFD  KVKEQS+ENP+FYVQYA+ R +SI  +A+++ P+    F     N+  
Sbjct: 421 RQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTKSILSKARELMPEAYNSFKEGKYNLSL 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             SE    E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   R
Sbjct: 481 LSSE---EEIEIIKLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGKENSDYR 537

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           F+  NN++LT+ RL L   +  II SGL +IGVE
Sbjct: 538 FIIENNKELTLARLALASVIQKIIASGLEVIGVE 571


>gi|87199111|ref|YP_496368.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|109895012|sp|Q2G9D9|SYR_NOVAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|87134792|gb|ABD25534.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 582

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/564 (45%), Positives = 355/564 (62%), Gaps = 29/564 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +  E PRD +HG L+TNAAM+L++P G +P  +A  + A ++ +P V S  IAG GFINL
Sbjct: 38  VTCEPPRDPSHGDLATNAAMVLAKPAGTNPRALATALAAELEKEPRVVSAEIAGPGFINL 97

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+    R  L+ I  +G +YGR+ +G    VN+E+VSANPTGPMH+GHCR AVVGD LA
Sbjct: 98  RLTDDAWRGELALIGSAGADYGRSTMGGSKVVNVEYVSANPTGPMHMGHCRGAVVGDALA 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+AFSG++V +EYY+NDAGAQ++ LA SV  RY++AL     ++PEG YPG YL  VGK
Sbjct: 158 DLLAFSGHQVIKEYYVNDAGAQVDVLARSVHMRYREAL-GETVEIPEGLYPGDYLVPVGK 216

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            LA+++  +     E  WL + +  +V AMM +IR DL  L I HD+F SE +      S
Sbjct: 217 ALAEEFGDKYAKAAEADWLILFRTRAVAAMMDMIRSDLATLGIHHDLFSSEAELQ---AS 273

Query: 272 PIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDG 329
              D  +   R    VY+G+L  PK KT +  D +   L LFRST  GDD DRP+ KS+G
Sbjct: 274 GKVDAAEQWLRAHDLVYDGLLEAPKGKTPE--DWEPVVLPLFRSTKFGDDQDRPIKKSNG 331

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI----NVLL 385
           ++TYF ADLAY   K +   D ++ + G+DH+G VKR++A  AA++           V L
Sbjct: 332 AWTYFGADLAYHFQKAQTA-DALVDIWGADHAGTVKRIKAAVAALTSADGGTPKPFEVKL 390

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V+L RDG P+KMSKR+G+F+TL  VV+EVG D VRF ML RK    +DFDF KV E 
Sbjct: 391 VQMVQLLRDGEPVKMSKRSGNFVTLSDVVEEVGKDVVRFTMLTRKPDAQMDFDFAKVVEA 450

Query: 446 SKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD---TSELQLIVH 501
           SK+NPVFYVQYA+AR CR++ + A + F             P  +  D     EL L+  
Sbjct: 451 SKDNPVFYVQYAHARICRNLRKGADEGF------------APSSANLDLLGDEELALVKL 498

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
            A++PR IE A  A+EP+++AF+L+DLAS FH  ++ G + P  RF+ A +  +T  RL 
Sbjct: 499 AAQFPRTIEAAAAAREPHRIAFFLHDLASAFHSFYNLGNDRPDKRFIVAQDSAMTAARLF 558

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L   +  +I +GL ++GVE+  E+
Sbjct: 559 LAAQIGQVIRNGLAVLGVEAAQEL 582


>gi|157827969|ref|YP_001494211.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165932660|ref|YP_001649449.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166232835|sp|A8GQM8|SYR_RICRS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083544|sp|B0BW17|SYR_RICRO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157800450|gb|ABV75703.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165907747|gb|ABY72043.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 576

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/566 (42%), Positives = 358/566 (63%), Gaps = 17/566 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           + I +   I+ P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QAIANTATIDIPKDSFNGDLSSNVAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K   +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++    Y VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ LA +Y ++LL    ++   I+K ++V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGQILAKEYGNKLLTMNYDERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   I + +  L   G +YEG LP PK K  ++ D +R Q LF+ST  GD  DRP+ 
Sbjct: 261 H--DKGEIEETVKLLESMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+  A+ +++ +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V +EVG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNNEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F      +  ++D S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L  + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ R
Sbjct: 491 KLLVSWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSEYRFVIESNKELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A+  +I SGL +IGVE  N+M
Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576


>gi|51473278|ref|YP_067035.1| arginyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81390280|sp|Q68XT9|SYR_RICTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51459590|gb|AAU03553.1| Arginine translase [Rickettsia typhi str. Wilmington]
          Length = 576

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/561 (42%), Positives = 354/561 (63%), Gaps = 17/561 (3%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I +   IE P+D  +G LS+N AMI++    + P  +A      +   P + S+ IAG
Sbjct: 22  QEIANTATIETPKDSFNGDLSSNIAMIIASKESIAPREVALKFKEVLVTLPYIASIEIAG 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN  +     +  +  I+    ++    I K + +NIE+VSANPTGPMH+GH R AV
Sbjct: 82  PGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKNSNINIEYVSANPTGPMHIGHARGAV 141

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA ++   GY VT+EYY+NDAG+QIN L  +V  RY++AL      +P G YPG Y
Sbjct: 142 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPIGLYPGEY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L  +G+ L+ +Y ++LL   + +   I+K  +V+ M+ + R DL  L I+HDIF SE   
Sbjct: 201 LIPLGEILSKEYGNKLLTMNDVERFKIIKSLAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  D   I   +  L   G +YEG LP PK K  +     + Q LF+ST  GD  DRP+ 
Sbjct: 261 Y--DKGEIEKTVKLLESMGLIYEGTLPAPKGKVHEDWK-HKVQKLFKSTNYGDSQDRPIE 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+EA+  A+ ++K +++V +
Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGQEKVKVDVKI 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           C+LV    +G+P+KMSKR G F +++ V  +VG D +RFMML R+N + LDFD  KVKEQ
Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNKKVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499
           S+ENP+FYVQYA+ R +SI  +A+++ P+  ++ F      +E +++ S      E+++I
Sbjct: 438 SRENPIFYVQYAHVRTKSILSKARELMPEA-YNSF------KEGKYNLSLLSTEEEIEII 490

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +E +    EP+++AFYL +LAS FH  W+ G+EN   RF+  NN++LT+ R
Sbjct: 491 KLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFIIENNQELTLAR 550

Query: 560 LQLVHAVASIINSGLNIIGVE 580
           L L   +  +I SGL +IGVE
Sbjct: 551 LALASVIQKVIASGLEVIGVE 571


>gi|88657836|ref|YP_507350.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|109894990|sp|Q2GGT3|SYR_EHRCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88599293|gb|ABD44762.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 576

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/560 (43%), Positives = 346/560 (61%), Gaps = 16/560 (2%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           IL +++++ P +  HG L TNAA+ILS  +   PL IAE++++      ++ S+ +   G
Sbjct: 30  ILSKLIVDYPNNHNHGDLYTNAALILSSHIKKSPLEIAEILLSEFSNIKEISSINVVKPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  +S     ++++SI +    +    IG G KVN+EFVSANPTGPMH+GH R A+ G
Sbjct: 90  FINFSISLYVWYEVVASINMLKEGFANVNIGNGQKVNVEFVSANPTGPMHIGHARGAIFG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+   GY+V REYYINDAG QI+ L  SV+ RY++A    D  +  G YPG+YL+
Sbjct: 150 DVLANLLEKVGYQVVREYYINDAGTQIDVLVESVYLRYKEAT-GQDIVIGSGLYPGLYLR 208

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +GK L +KY ++LL     + + I++D S++ +M +I++DL  L I+HD+F SE +  +
Sbjct: 209 EIGKLLYEKYGTDLLEMSFVRKMKIIRDVSLEYLMNLIKEDLALLGIEHDVFTSEAELLK 268

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +   +  L  +  +Y G+L  PK    Q     R Q+LF+ST  GDDVDR L K 
Sbjct: 269 NNI--VEKCVKLLEDKQLIYYGVLEQPKGTEMQNWK-PRTQMLFKSTDFGDDVDRALQKV 325

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DGS+TYFA D+AY   K  RGF +MI  +GSDH GYVKRL+A   A+S   A +++ L  
Sbjct: 326 DGSWTYFANDIAYHFDKISRGFQHMILELGSDHIGYVKRLKAAVKALSNNNATVDIKLHN 385

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    DG+ +KMSKR+G+F+T+R V+++VG D VRFMML RK+  +LDFDF KV EQSK
Sbjct: 386 TVNFLDDGVQVKMSKRSGEFLTIRDVIEKVGKDVVRFMMLTRKSDVVLDFDFAKVVEQSK 445

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            NP+FYVQYA+AR  S+ R A +I    D DF +               E+ LI  LA++
Sbjct: 446 NNPIFYVQYAHARVCSLMRNAPNILGIEDTDFSVLS----------SKEEILLIKLLAKW 495

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E +    EP+++ FYL ++A  FH  W +G +N   RF+  N+  LT  R+ L  +
Sbjct: 496 PNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGYGNKNANRRFIIDNDVNLTSARIYLAKS 555

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA II+SGL I  +    EM
Sbjct: 556 VAYIISSGLKIFSIVPLEEM 575


>gi|114327924|ref|YP_745081.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316098|gb|ABI62158.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 591

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/572 (43%), Positives = 354/572 (61%), Gaps = 21/572 (3%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           ++  R+ +   RD  HG ++TNAAMI ++P G  P  +A+ + A +    +++    AG 
Sbjct: 27  ELTARVEVTPTRDPLHGDMATNAAMIAAKPAGKPPRDLAQALSAALAGVTEIERAEPAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N++L     R  + +I+ +GI YG    G G +VNIE+VSANPTGPMH+GHCR AVV
Sbjct: 87  GFVNMHLRAEAWRMRIPAILEAGIRYGDGSAGYGKRVNIEYVSANPTGPMHIGHCRGAVV 146

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN------DSDLPEGY 200
           GD LA+LM  +GY VT+EYYINDAGAQ+  LA + +WRY QAL          + +P G 
Sbjct: 147 GDALANLMGKAGYTVTKEYYINDAGAQVIALAWAAYWRYLQALGTTLTEDEYAAQVPCGL 206

Query: 201 -YPGVYLKHVGKELADKYSSELLNFPEEK------WLPIVKDYSVQAMMKIIRDDLKALN 253
            Y G YL  VG+ELA +   + L  P         WL  V++++V  MM  IR+DL  L 
Sbjct: 207 QYRGDYLVPVGEELA-RLHGDTLAGPGTTVADSALWLNTVREFTVAQMMASIREDLDLLG 265

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +  D+F SE    +   +     I+ L + G +YEG+L PPK KT    +  R+Q LFRS
Sbjct: 266 VHPDVFSSELALLQSGAADA--AIERLQQDGLIYEGVLEPPKGKTPDDWE-PREQTLFRS 322

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           T  GDDVDRPL KSDG+ TYFA D+AY   K  R  D ++ V+G+DH GYV R++A   A
Sbjct: 323 TSFGDDVDRPLRKSDGTNTYFANDIAYHADKATRA-DIVVDVLGADHGGYVPRVKAAMRA 381

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           ++  +A    +LC++V + RDG P++MSKRAG ++TLR +++EVG D+VRF ML RK+  
Sbjct: 382 IA-PQAIYEAVLCQIVHVVRDGQPVRMSKRAGTYVTLRDLLEEVGRDAVRFTMLTRKSDA 440

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            ++FD  +   Q++ENPVFYVQYA+ARC S+ R A +       +      +  +S    
Sbjct: 441 QMEFDLDQALAQTRENPVFYVQYAHARCCSVLRMAAEQGLTTQPEALRHAAL--DSLTSD 498

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +EL LI  LA +PR++E A  A+EP+++AF+LY+LA  FH  W+ GR++  LRF+Q +  
Sbjct: 499 AELTLIRRLAGWPRIVEAAAQAREPHRIAFFLYELAGDFHMLWNKGRDDATLRFIQQDRT 558

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             T  RL LV A A +I SGL ++GV   NEM
Sbjct: 559 TETTARLALVEAAAIVIRSGLAVMGVAPVNEM 590


>gi|68171671|ref|ZP_00545032.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998906|gb|EAM85597.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 576

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/560 (43%), Positives = 345/560 (61%), Gaps = 16/560 (2%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           IL +++++ P +  HG L TNAA+ILS  +   PL IAE++++       + S+ +   G
Sbjct: 30  ILSKLIVDYPNNHNHGDLYTNAALILSSHIKKSPLEIAEILLSEFSNIKGISSINVVKPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  +S     ++++SI +    +    IG G KVN+EFVSANPTGPMH+GH R A+ G
Sbjct: 90  FINFSISLYVWYEVVASINMLKEGFANVNIGNGQKVNVEFVSANPTGPMHIGHARGAIFG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+   GY+V REYYINDAG QI+ L  SV+ RY++A    D  +  G YPG+YL+
Sbjct: 150 DVLANLLEKVGYQVVREYYINDAGTQIDVLVESVYLRYKEAT-GQDIVIGSGLYPGLYLR 208

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +GK L +KY ++LL     + + I++D S++ +M +I++DL  L I+HD+F SE +  +
Sbjct: 209 EIGKLLYEKYGTDLLEMSFVRKMKIIRDVSLEYLMNLIKEDLALLGIEHDVFTSEAELLK 268

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +   +  L  +  +Y G+L  PK    Q     R Q+LF+ST  GDDVDR L K 
Sbjct: 269 NNI--VEKCVKLLEDKQLIYYGVLEQPKGTEMQNWK-PRTQMLFKSTDFGDDVDRALQKV 325

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DGS+TYFA D+AY   K  RGF +MI  +GSDH GYVKRL+A   A+S   A +++ L  
Sbjct: 326 DGSWTYFANDIAYHFDKISRGFQHMILELGSDHIGYVKRLKAAVKALSNNNATVDIKLHN 385

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    DG+ +KMSKR+G+F+T+R V+++VG D VRFMML RK+  +LDFDF KV EQSK
Sbjct: 386 TVNFLDDGVQVKMSKRSGEFLTIRDVIEKVGKDVVRFMMLTRKSDVVLDFDFAKVVEQSK 445

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            NP+FYVQYA+AR  S+ R A +I    D DF +               E+ LI  LA++
Sbjct: 446 NNPIFYVQYAHARVCSLMRNAPNILGIEDTDFSVLS----------SKEEILLIKLLAKW 495

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E +    EP+++ FYL ++A  FH  W +G +N   RF+  N+  LT  R+ L  +
Sbjct: 496 PNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGYGNKNANRRFIIDNDVNLTSARIYLAKS 555

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA II+SGL I  +    EM
Sbjct: 556 VAYIISSGLKIFSIVPLEEM 575


>gi|73667116|ref|YP_303132.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|109894989|sp|Q3YRX1|SYR_EHRCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72394257|gb|AAZ68534.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 576

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/560 (43%), Positives = 351/560 (62%), Gaps = 16/560 (2%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           IL ++V++ P +  +G L TNAA+ILS+ +  DPL +AE+++  +    ++ ++ +   G
Sbjct: 30  ILSKLVVDYPNNHDYGDLYTNAALILSKYVKKDPLDVAEILLRELSNIKEISNISVVKPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  LS     +++SSI +   ++    IG G KVNIEFVSANPTGPMH+GH R A+ G
Sbjct: 90  FINFNLSLYVWYEVISSINMLKEDFANVNIGNGRKVNIEFVSANPTGPMHIGHARGAIFG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+   GY+V REYYINDAG QI+ L  SV+ RY++A    D  +  G YPG+YLK
Sbjct: 150 DVLANLLTKVGYQVVREYYINDAGTQIDVLVESVYLRYKEAA-GQDIVIGSGLYPGLYLK 208

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G+ L +KY ++LL     + + I++D S++ ++ +I+ DL  L I+HD+F SE +  R
Sbjct: 209 EIGQLLYEKYGTDLLEMNSAQKMKIIRDISLKHLLDLIKQDLVLLGIKHDVFTSEAELLR 268

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +   +  L  +  +Y G+L  PK  T       RKQ+LF+ST  GDDVDR L K 
Sbjct: 269 NNV--VEKCVKLLEDKKLIYYGVLDQPKG-TENNNWQPRKQMLFKSTDFGDDVDRALQKV 325

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DGS+TYFA+D+AY   K  RGF +MI  +GSDH GYVKRL+A   A+S+  A I++ L  
Sbjct: 326 DGSWTYFASDIAYHFDKISRGFQHMILELGSDHIGYVKRLKAAVKALSDNTATIDIKLHN 385

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V    +G+ +KMSKR+G+F+T++ V++EVG D VRF+ML RK+  +LDFDF KV EQSK
Sbjct: 386 IVNFLNNGVQVKMSKRSGEFLTIKDVIEEVGIDVVRFIMLTRKSDAVLDFDFVKVVEQSK 445

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFP--DLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            NP+FYVQYA+AR  S+ R A +I    D DF +               E+ LI  LA++
Sbjct: 446 NNPIFYVQYAHARVCSLMRNAPNILKIEDTDFSVLS----------SKEEILLIKLLAKW 495

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             VIE +    EP+++ FYL ++A  FH  W +G ++   RF+  ++  LT  R+ L  A
Sbjct: 496 SNVIELSAKTAEPHRITFYLIEVAETFHMLWGYGNKDVNRRFIIDDDINLTSARIYLARA 555

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA +I+SGL I  +    EM
Sbjct: 556 VAYVISSGLKIFSIVPLEEM 575


>gi|269958746|ref|YP_003328533.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848575|gb|ACZ49219.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 593

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/583 (40%), Positives = 354/583 (60%), Gaps = 14/583 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF +F   +   + E+    +V   +L ++++  P +  HG + TNAA+++ +    +P+
Sbjct: 24  LFGNFRCIVIQKIGEL-WGSEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNPM 82

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE +   +     VDSV +   GF+NL  S       +  I  +G +YG   +G+G K
Sbjct: 83  EIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQK 142

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL  SV+
Sbjct: 143 VNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESVY 202

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY++AL      + EG YPG YLK + K L +K+  +LL    E    +++++++++++
Sbjct: 203 LRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSIL 259

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +IR+D+  L ++HD+F  E D  R     +   ++ L ++G +Y G L  P+    +  
Sbjct: 260 DLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAA 317

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
              R+QLLFRST  GDD DR L K DGS+TYFA D+AY   K  RGF +MI  +G DH G
Sbjct: 318 WQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHKG 377

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV RL+A   A+S+ KA I+V L  +V    +G+P+KMSKR G+F+T R VV+EVG D  
Sbjct: 378 YVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDVA 437

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF+M+ RKN  +LDFDF K KEQSK++ +FY+QYA+AR  S+ R A  + P  D D    
Sbjct: 438 RFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSRV 497

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +  P        E+ LI  L  +P ++E++ +  EP+++AFYL ++A  FH  W HG  +
Sbjct: 498 SSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSRS 549

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +RF+   +   T  R+ LV  VA +I+ GL+I  +    EM
Sbjct: 550 VDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592


>gi|56416837|ref|YP_153911.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|255003182|ref|ZP_05278146.1| arginyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255004313|ref|ZP_05279114.1| arginyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|81359057|sp|Q5PAM4|SYR_ANAMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56388069|gb|AAV86656.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 579

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/583 (40%), Positives = 354/583 (60%), Gaps = 14/583 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF +F   +   + E+    +V   +L ++++  P +  HG + TNAA+++ +    +P+
Sbjct: 10  LFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNPM 68

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE +   +     VDSV +   GF+NL  S       +  I  +G +YG   +G+G K
Sbjct: 69  EIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQK 128

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL  SV+
Sbjct: 129 VNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESVY 188

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY++AL      + EG YPG YLK + K L +K+  +LL    E    +++++++++++
Sbjct: 189 LRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSIL 245

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +IR+D+  L ++HD+F  E D  R     +   ++ L ++G +Y G L  P+    +  
Sbjct: 246 DLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAA 303

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
              R+QLLFRST  GDD DR L K DGS+TYFA D+AY   K  RGF +MI  +G DH G
Sbjct: 304 WQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHKG 363

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV RL+A   A+S+ KA I+V L  +V    +G+P+KMSKR G+F+T R VV+EVG D  
Sbjct: 364 YVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDVA 423

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF+M+ RKN  +LDFDF K KEQSK++ +FY+QYA+AR  S+ R A  + P  D D    
Sbjct: 424 RFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSRV 483

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +  P        E+ LI  L  +P ++E++ +  EP+++AFYL ++A  FH  W HG  +
Sbjct: 484 SSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSRS 535

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +RF+   +   T  R+ LV  VA +I+ GL+I  +    EM
Sbjct: 536 VDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 578


>gi|222475202|ref|YP_002563618.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
 gi|222419339|gb|ACM49362.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
          Length = 593

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/583 (40%), Positives = 354/583 (60%), Gaps = 14/583 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF +F   +   + E+    +V   +L ++++  P +  HG + TNAA+++ +    +P+
Sbjct: 24  LFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNPM 82

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE +   +     VDSV +   GF+NL  S       +  I  +G +YG   +G+G K
Sbjct: 83  EIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQK 142

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL  SV+
Sbjct: 143 VNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESVY 202

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY++AL      + EG YPG YLK + K L +K+  +LL    E    +++++++++++
Sbjct: 203 LRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSIL 259

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +IR+D+  L ++HD+F  E D  R     +   ++ L ++G +Y G L  P+    +  
Sbjct: 260 DLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAA 317

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
              R+QLLFRST  GDD DR L K DGS+TYFA D+AY   K  RGF +MI  +G DH G
Sbjct: 318 WQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHKG 377

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV RL+A   A+S+ KA I+V L  +V    +G+P+KMSKR G+F+T R VV+EVG D  
Sbjct: 378 YVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDVA 437

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF+M+ RKN  +LDFDF K KEQSK++ +FY+QYA+AR  S+ R A  + P  D D    
Sbjct: 438 RFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSRV 497

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +  P        E+ LI  L  +P ++E++ +  EP+++AFYL ++A  FH  W HG  +
Sbjct: 498 SSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSRS 549

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +RF+   +   T  R+ LV  VA +I+ GL+I  +    EM
Sbjct: 550 VDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592


>gi|189183882|ref|YP_001937667.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692015|sp|B3CST6|SYR_ORITI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189180653|dbj|BAG40433.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 590

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/553 (43%), Positives = 352/553 (63%), Gaps = 13/553 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E  +D     +STN AM++++ +  + +T+A L   ++   P + ++ IAG GFIN 
Sbjct: 40  IVLESSKDVNSYDISTNIAMLIAKKMNQNSITLANLFKKKLSHYPYIANITIAGPGFINF 99

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +        L+ I+        + IG   KVNIE+VSANPTGP+H+GH R AV GD LA
Sbjct: 100 VILQEAWTNYLAIILDGSYRKEYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLA 159

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+  +GY+VTREYY+ND G QI+ L+ SV+ RY+QA+    +D+P+G YPG YL  VG 
Sbjct: 160 TLLQCTGYQVTREYYVNDTGVQIDNLSKSVYLRYKQAITGQAADIPKGLYPGEYLISVGT 219

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            LA++Y  +LL   E ++L I+KD +V  +++ I+ DL  + ++HD+F SE   H  D +
Sbjct: 220 NLAEEYGDKLLTLSEPEYLNIIKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSN 277

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I  +ID L+ +  VY G L  PK +++      R QLLF+ST+ GDD DRPL K DGS+
Sbjct: 278 VISKVIDLLSVKKLVYTGKLSQPKGQSSDNW-QPRSQLLFKSTIFGDDQDRPLQKEDGSW 336

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVR 390
           +YFA+D+AY   K +RGFD +I+++G+DH GYV R++A+  A+ S +   +++ +C+LV+
Sbjct: 337 SYFASDIAYADNKIKRGFDYVIFILGADHIGYVSRIKAIIQALDSNQDVTLDIKICQLVK 396

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  DG+ +KMSKR+G F T+R V + VG D +RF ML RKN+ +LDFD  K++EQS++NP
Sbjct: 397 LIEDGVAVKMSKRSGSFTTIRDVYETVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNP 456

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYP 506
           VFYVQYAY R  SI R+AKD   ++ +++F  N    +S+F       EL LI  LA + 
Sbjct: 457 VFYVQYAYVRAGSILRKAKD-NANIAYEIFSTN----KSDFSLLSTKEELNLIKILAVWS 511

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +++ A    EP+++A YL  LA+ FH  W+    +   RF+  N+  LT  RL L  AV
Sbjct: 512 HMLDGAVKNFEPHRIAIYLQKLAAEFHALWNLKSRDLDYRFIVLNDNNLTAARLALATAV 571

Query: 567 ASIINSGLNIIGV 579
             II  GL IIG+
Sbjct: 572 REIIREGLKIIGI 584


>gi|58697380|ref|ZP_00372706.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536220|gb|EAL59776.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 494

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/508 (46%), Positives = 328/508 (64%), Gaps = 17/508 (3%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P + AHG + TN AM+L++    +P+ IAE++    ++  +V  V IAG GFIN++
Sbjct: 4   IVEPPSNRAHGDIYTNVAMVLAKHEKKNPIEIAEVLAKEFELFDEVAKVEIAGPGFINIH 63

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L       IL  I     E+G   IG    +N+EFVSANPTGP+H+GH R AV GD LA+
Sbjct: 64  LKIKVWHGILKQINELKTEFGTLDIGNNQAINVEFVSANPTGPLHIGHARGAVFGDVLAN 123

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+   GY+VT+EYYINDAGAQI+TL  SV+ RY++AL    S + +G YPG YLK +G+ 
Sbjct: 124 LLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEALGEKIS-IEKGLYPGEYLKPIGEG 182

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           LA KY  E L   + +   I+++Y++  ++++I++D+  L + HD+F SE +  +     
Sbjct: 183 LAKKYGKEFLKKQDNQ---IIREYTLSFILELIKEDMNLLGVNHDVFTSEYELQK--SGK 237

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I + I  L+ +G VYEG L  PK K ++     RK++LFRST  GDDVDR L K  GS+T
Sbjct: 238 IEESIKILSDKGLVYEGYLEKPKGKESENW-TSRKEMLFRSTKFGDDVDRALKKDGGSWT 296

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY   K  RGF+NMI  +GSDH GYVKRL+AV +A+S+ +A+I V L  +V  +
Sbjct: 297 YFASDIAYHFDKISRGFNNMIVELGSDHGGYVKRLKAVVSALSDDQAKIEVKLHNIVNFF 356

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            +G P+KMSKR+G+F+T R VV+EVG D  RF+ML RKN  +LDFDF KVKEQSK+NP+F
Sbjct: 357 ENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIF 416

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  S+ R A    P  D  L               EL LI  LA++P V+E A
Sbjct: 417 YVQYAHARAHSLMRNAPKELPTADPSLLRTG----------GELFLIKTLAKWPDVVEIA 466

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               EP+++ FYL ++A  FH  W +G+
Sbjct: 467 ARLCEPHRITFYLLEVAEAFHVLWGYGK 494


>gi|88607168|ref|YP_505281.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|109894971|sp|Q2GK20|SYR_ANAPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88598231|gb|ABD43701.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 580

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/585 (39%), Positives = 357/585 (61%), Gaps = 17/585 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F + ++  ++ +     + + +  RI++  P    HG L TNAA+IL +    +P+
Sbjct: 10  IFGFFRNAIEERIRAVWSGDNIPESLFKRIIVGPPAQPKHGDLYTNAALILGKFDKKNPM 69

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  +    +    ++S+ +   GFIN +   S    ++ +I   G EYGR  +G   K
Sbjct: 70  ELASTLCNAFENIEGIESINVVAPGFINFHCVNSVWHGVVRNINKLGREYGRTDLGHNKK 129

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VNIEFVSANPTGP+H+GH R AV GD L++L+ + GY+V +EYY+NDAG+Q+ TL  SVF
Sbjct: 130 VNIEFVSANPTGPLHIGHARGAVFGDVLSNLLKWVGYDVIKEYYVNDAGSQVKTLVSSVF 189

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY++AL   +  +  G YPG YLK + ++L +KY S+LLN  ++    I++ +++ +M+
Sbjct: 190 LRYKEAL-GEEITIGAGLYPGEYLKPIARDLVEKYGSDLLNASDKD--EIIRSFTLSSML 246

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +I++DL  L ++HD+F+SE D    + + I + +  L  +G +YEG+L  PK +     
Sbjct: 247 NLIKEDLALLGVEHDVFVSESDLQ--NRNVIEECVKYLRERGIIYEGVLEKPKREDELSE 304

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
              R Q+LF+ST  GDD DR L K DG+++YFA D+ Y   K  RGFD+MI  +G DH G
Sbjct: 305 WQPRVQMLFKSTEFGDDSDRALQKEDGTWSYFAGDIGYHFHKISRGFDSMIMTLGFDHKG 364

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV RL+A  AA+S  KA I++ L  LV    +G P+KMSKR G+F+T+R V+DEVG D  
Sbjct: 365 YVSRLKAAVAALSNGKASIDIKLYNLVNFLENGTPVKMSKRKGEFLTVRDVIDEVGRDVA 424

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DLDFDLF 480
           RFMML R+N  +LDFDF K +E+SK++ +FY+QYA+AR RSI R+  ++     +DF   
Sbjct: 425 RFMMLTRRNDVVLDFDFAKAREESKDSQIFYIQYAHARIRSIVRRCPELLAIEKIDFSC- 483

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              VI ++      EL L+  L+ +P VI+ +    EP+ +AFYL ++A  FH  W  G 
Sbjct: 484 ---VITEQ------ELSLLRLLSRWPSVIKTSAENYEPHTIAFYLIEVAEAFHALWGCGN 534

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +P +RF+   +   T  R+ +  AV+ +I SGL+I  +    EM
Sbjct: 535 SDPSMRFIVEGDLHTTSARIYIAIAVSHVIASGLDIFSITPSEEM 579


>gi|57239219|ref|YP_180355.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579177|ref|YP_197389.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81352891|sp|Q5HB39|SYR_EHRRW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57161298|emb|CAH58219.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417803|emb|CAI27007.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 576

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/575 (42%), Positives = 355/575 (61%), Gaps = 14/575 (2%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           K ++  ID  +   + IL +++++ P +  HG L TNAA+ILS+ +  +P+ IA+++V  
Sbjct: 14  KLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIKKNPMDIAKILVDE 73

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                ++  + +   GFIN  +S     +I+ SI     ++G    G G +VNIEFVSAN
Sbjct: 74  FSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFGNGKRVNIEFVSAN 133

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTGPMH+GH R A+ GD LA+L+   GYEV REYYINDAGAQI+ L  SV+ RY++ L  
Sbjct: 134 PTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQIDVLVESVYLRYKEVLGE 193

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N   +  G YPG+YLK +GK L  +Y S LL     +   I++D S+  +MK+I++DL  
Sbjct: 194 NIV-IGSGLYPGLYLKDIGKLLYQEYDSGLLGMDYSQRRRIIRDVSLMYLMKLIKEDLAL 252

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLL 310
           L I+HDIF SE    + +   ++  ++ L  +  +Y G L  PK   T+  +   R Q+L
Sbjct: 253 LGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG--TEGINWKPRTQML 308

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F+ST  GDDVDR L K+DGS+TYFA D+AY   K  RGF +MI  +GSDH GYVKRL+A 
Sbjct: 309 FKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGSDHIGYVKRLKAA 368

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A+S+  A I++ L  +V    +G  +KMSKR+G+F+T++ V+++VG D VRF+ML RK
Sbjct: 369 VKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVGKDVVRFIMLTRK 428

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
           +  +LDFDF KV EQSK NPVFYVQYA+AR  S+ R A  I   L+ +L   +V+  +  
Sbjct: 429 SDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIELVDFSVLSSK-- 483

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ LI  LA++  ++E +    EP+++ FYL ++A  FH  W +G ++  +RF+  
Sbjct: 484 ---EEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEIAEAFHALWGYGNKSTDMRFIVD 540

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           NN  LT  R+ L  +V  +I SGL I  +    EM
Sbjct: 541 NNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575


>gi|58617231|ref|YP_196430.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58416843|emb|CAI27956.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 601

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/575 (42%), Positives = 355/575 (61%), Gaps = 14/575 (2%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           K ++  ID  +   + IL +++++ P +  HG L TNAA+ILS+ +  +P+ IA+++V  
Sbjct: 39  KLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIKKNPMDIAKILVDE 98

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                ++  + +   GFIN  +S     +I+ SI     ++G    G G +VNIEFVSAN
Sbjct: 99  FSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFGNGKRVNIEFVSAN 158

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTGPMH+GH R A+ GD LA+L+   GYEV REYYINDAGAQ++ L  SV+ RY++ L  
Sbjct: 159 PTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLVESVYLRYKEVLGE 218

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N   +  G YPG+YLK +GK L  +Y S LL     +   I++D S+  +MK+I++DL  
Sbjct: 219 NIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSLMYLMKLIKEDLAL 277

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLL 310
           L I+HDIF SE    + +   ++  ++ L  +  +Y G L  PK   T+  +   R Q+L
Sbjct: 278 LGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG--TEGINWKPRTQML 333

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F+ST  GDDVDR L K+DGS+TYFA D+AY   K  RGF +MI  +GSDH GYVKRL+A 
Sbjct: 334 FKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGSDHIGYVKRLKAA 393

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A+S+  A I++ L  +V    +G  +KMSKR+G+F+T++ V+++VG D VRF+ML RK
Sbjct: 394 VKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVGKDVVRFIMLTRK 453

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
           +  +LDFDF KV EQSK NPVFYVQYA+AR  S+ R A  I   L+ +L   +V+  +  
Sbjct: 454 SDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIELVDFSVLSSK-- 508

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ LI  LA++  ++E +    EP+++ FYL ++A  FH  W +G ++  +RF+  
Sbjct: 509 ---EEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGYGNKSTDMRFIVD 565

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           NN  LT  R+ L  +V  +I SGL I  +    EM
Sbjct: 566 NNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 600


>gi|109894991|sp|Q5FH87|SYR_EHRRG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 576

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/575 (42%), Positives = 355/575 (61%), Gaps = 14/575 (2%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           K ++  ID  +   + IL +++++ P +  HG L TNAA+ILS+ +  +P+ IA+++V  
Sbjct: 14  KLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIKKNPMDIAKILVDE 73

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                ++  + +   GFIN  +S     +I+ SI     ++G    G G +VNIEFVSAN
Sbjct: 74  FSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFGNGKRVNIEFVSAN 133

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTGPMH+GH R A+ GD LA+L+   GYEV REYYINDAGAQ++ L  SV+ RY++ L  
Sbjct: 134 PTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLVESVYLRYKEVLGE 193

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N   +  G YPG+YLK +GK L  +Y S LL     +   I++D S+  +MK+I++DL  
Sbjct: 194 NIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSLMYLMKLIKEDLAL 252

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLL 310
           L I+HDIF SE    + +   ++  ++ L  +  +Y G L  PK   T+  +   R Q+L
Sbjct: 253 LGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG--TEGINWKPRTQML 308

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F+ST  GDDVDR L K+DGS+TYFA D+AY   K  RGF +MI  +GSDH GYVKRL+A 
Sbjct: 309 FKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGSDHIGYVKRLKAA 368

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A+S+  A I++ L  +V    +G  +KMSKR+G+F+T++ V+++VG D VRF+ML RK
Sbjct: 369 VKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVGKDVVRFIMLTRK 428

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
           +  +LDFDF KV EQSK NPVFYVQYA+AR  S+ R A  I   L+ +L   +V+  +  
Sbjct: 429 SDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIELVDFSVLSSK-- 483

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ LI  LA++  ++E +    EP+++ FYL ++A  FH  W +G ++  +RF+  
Sbjct: 484 ---EEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGYGNKSTDMRFIVD 540

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           NN  LT  R+ L  +V  +I SGL I  +    EM
Sbjct: 541 NNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575


>gi|148284332|ref|YP_001248422.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166232817|sp|A5CD00|SYR_ORITB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146739771|emb|CAM79637.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 590

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/553 (42%), Positives = 351/553 (63%), Gaps = 13/553 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E  +D     +STN AM++++ +  + +T+A L   ++   P +D++ IAG GFIN 
Sbjct: 40  IVLESSKDVNSYDISTNIAMLIAKKMNQNSITLANLFKKKLSHYPYIDNITIAGPGFINF 99

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +        L+ I+        + IG   KVNIE+VSANPTGP+H+GH R AV GD LA
Sbjct: 100 VILQEEWTNYLAIILDGSYRKEYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLA 159

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+  +GY+VTREYY+ND G QI+ LA SV+ RY+Q +    +D+P+G YPG YL  VG 
Sbjct: 160 ALLQCTGYQVTREYYVNDTGVQIDNLAKSVYLRYKQVITGQVADIPKGLYPGEYLISVGT 219

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +Y  +LL   E ++L I+KD +V  +++ I+ DL  + ++HD+F SE   H  D +
Sbjct: 220 KLAKEYGDKLLTLSEPEYLNIIKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSN 277

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I  +ID L+ +  VY G L  PK +++      R QLLF+ST+ GD+ DRPL K DGS+
Sbjct: 278 VISKVIDLLSVKKLVYTGELSQPKGQSSDNW-QPRSQLLFKSTIFGDNQDRPLQKEDGSW 336

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVR 390
           +YFA+D+AY   K +RGFD +I+++G+DH GYV R++A+  A+   +   +++ +C+LV+
Sbjct: 337 SYFASDIAYADNKIKRGFDYVIFILGADHIGYVSRIKAIIQALDFNQDITLDIKICQLVK 396

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G+ +KMSKR+G F T+R V + VG D +RF ML RKN+ +LDFD  K++EQS++NP
Sbjct: 397 LIENGVAVKMSKRSGSFTTIRDVYEIVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNP 456

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYP 506
           VFYVQYAY R  SI R+AKD   ++ +++F  N    +S+F       EL LI  LA + 
Sbjct: 457 VFYVQYAYVRAGSILRKAKD-NANIAYEIFSTN----KSDFSLLSTKEELNLIKILAVWS 511

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +++ A    EP+++A YL  LA+ FH  W+    +   RF+  N+  LT  RL L  AV
Sbjct: 512 HMLDGAVKNFEPHRIAIYLQKLAAEFHALWNLKSNDLDYRFIVLNDNNLTAARLALATAV 571

Query: 567 ASIINSGLNIIGV 579
             II  GL IIG+
Sbjct: 572 REIIREGLKIIGI 584


>gi|153005149|ref|YP_001379474.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|166232753|sp|A7HCP4|SYR_ANADF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152028722|gb|ABS26490.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 605

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/573 (40%), Positives = 346/573 (60%), Gaps = 32/573 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDP--DVDSVFIAGKGFIN 90
           +E PRD  HG  + NAAM+L++  G  P  +A+ I A ++ +D   ++  + +AG GFIN
Sbjct: 32  VEAPRDPKHGDFAVNAAMVLAKAAGKPPRDLAQAIAAEVRAVDAQHEIAGLEVAGPGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L+P    + L  +V  G  YGR  +G+G KV +E+VSANPTGPMHVGH R AVVGD +
Sbjct: 92  VRLAPDVWLRALGRVVAEGTAYGRTEVGRGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            SL+ ++G+EVTREYY+ND GAQ+ TLA SV  RYQ+ L+     +P   YPG Y+K V 
Sbjct: 152 QSLLRWAGFEVTREYYVNDYGAQVQTLARSVHLRYQE-LFGRQVTMPPKSYPGEYVKDVA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             L  ++    L+ PE +WL + +D +V+ ++ +IR+DL+A+NI+ D + SE   +  + 
Sbjct: 211 AALKAEHGDRWLDAPEAEWLALFRDRAVEHVLGLIREDLRAVNIEFDRWYSEKALY--ES 268

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKC----------DMDRKQL-------LFRS 313
             +   +  LA +  VY G LPPPKSK  Q            D+  + +       LFRS
Sbjct: 269 GTVDRFLRFLAEKDLVYVGKLPPPKSKKGQPAPAQAASNSAHDLGEEGIAASDDLTLFRS 328

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           +  GD+VDRP+ K+DG+ TYF AD+AY   K +R  D ++ V+G+DH GYV RLEA   A
Sbjct: 329 SQYGDEVDRPVKKADGTTTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAALEA 387

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +   +  ++V+L ++V L R G  +KMSKRAG  ++LR VVDEVG D+ RF+ L R++  
Sbjct: 388 LGASRKDLHVVLIQMVNLTRGGEAVKMSKRAGTVVSLREVVDEVGRDATRFIFLTRRSDA 447

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFD 492
            LDFD    K Q+ +NPVFYVQY +AR   IF +A++   P  +FDL     +    E D
Sbjct: 448 QLDFDIELAKRQTLDNPVFYVQYGHARLAQIFAKAREAGAPVPEFDLEAARTLTSAEEQD 507

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                LI  +  +P ++  A +A EP+++AFYL +  + FH +++ G+     R + A+ 
Sbjct: 508 -----LIRRIVAFPDMLAAAALAYEPHRVAFYLQETIAAFHSYYTQGKRTGE-RVISADA 561

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RK T  RL L  A+  ++ +GL ++GV +P  M
Sbjct: 562 RK-TAGRLFLCRALKQVLANGLGLLGVAAPERM 593


>gi|114778709|ref|ZP_01453521.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551071|gb|EAU53633.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 576

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 331/566 (58%), Gaps = 33/566 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V+ RP++  HG  + N AM L+R L   P  IA  I+A +     V++  +AG GFIN+
Sbjct: 32  VVLTRPKEKEHGDYAANVAMPLARVLKQSPQQIAANILAAVVWPDAVEAADVAGPGFINI 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            L  +    +L +I+    EYGR       TKVN+EFVSANPTGPMHVGH R AVVGD L
Sbjct: 92  RLKKASEANVLKTIIQQAEEYGRVAAAADATKVNLEFVSANPTGPMHVGHGRGAVVGDAL 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+A +G  V REYYINDAGAQI  LA SV+ R ++ L     + PE  YPG Y+  + 
Sbjct: 152 ANLLAATGNHVQREYYINDAGAQIGVLAGSVWLRMRE-LNGEQIEFPESAYPGEYIVQIA 210

Query: 211 KE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            E LA      LL   E+  L ++   ++ A M +IRDDL A+ I  D++ SE   H  +
Sbjct: 211 TEVLAAHDYKTLLAMDEDARLALIGQLAIDANMAMIRDDLNAIGIHFDLYFSEQSLH--N 268

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + ++I+ L   G VY G LPPPK K         + LLFR+T  GDDVDRPL K DG
Sbjct: 269 SGRVNELIERLQADGVVYRGTLPPPKGKEVSDY-QPVEHLLFRTTDFGDDVDRPLAKQDG 327

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA----QINVLL 385
           + TYFAAD+AY   K+ RGFD MI V G+DH GYV R++A   A+ E +A    Q +V+L
Sbjct: 328 TATYFAADIAYHYDKHLRGFDRMIDVWGADHGGYVTRVQAAMKALIEPEAASAAQPDVIL 387

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L RDG+P+KMSKRAG F+TLR VVDEVG D+VRF  + R+    LDFD    K+Q
Sbjct: 388 VQMVNLTRDGVPVKMSKRAGTFVTLREVVDEVGRDAVRFNFMTRRVESQLDFDLEAAKKQ 447

Query: 446 SKENPVFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           + ENPV+YVQYA+AR  +I R+A D         D+D  +   +           E +L+
Sbjct: 448 NDENPVYYVQYAHARIAAILRKASDEGVVVGEIDDVDLSVLTSH----------EEQRLV 497

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            HL  YP  +  A    E Y++A Y   LA+ FH  +   R       V  ++  LT+ R
Sbjct: 498 AHLLAYPEALLRAADRLEAYRVATYAMRLAADFHSFYHKHR-------VVTDDNNLTVAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L+ AVA +I + L I+GV +P+ M
Sbjct: 551 MLLIRAVAQVITNALGILGVSAPDRM 576


>gi|197122748|ref|YP_002134699.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689865|sp|B4UEJ9|SYR_ANASK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|196172597|gb|ACG73570.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 598

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/568 (40%), Positives = 342/568 (60%), Gaps = 29/568 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFIN 90
           +E PRD  HG  + NAAM+L++  G  P  +A+ IV  ++      D+  + IAG GFIN
Sbjct: 32  VEAPRDPKHGDFAVNAAMVLAKQAGRPPRELAQAIVEAVRAADTAGDLAGLEIAGPGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + LSP    + L+  V  G +YGR  +G+G KV +E+VSANPTGPMHVGH R AVVGD +
Sbjct: 92  VRLSPDLWLRTLARAVAEGPDYGRTAVGQGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+ ++G++VTREYY+ND GAQ+ TLA SV  RYQ+ L+     +P   YPG Y+K + 
Sbjct: 152 QGLLRWAGFDVTREYYVNDYGAQVQTLARSVHLRYQE-LHGRTVTMPPKSYPGEYVKDIA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             L  +Y +  L+ PE +WL + +D++VQ ++ +IR DL A+NI  D + SE   +  + 
Sbjct: 211 AGLKAEYGARFLDAPEAEWLTLFRDHAVQHVLGMIRGDLAAVNISFDRWSSEKALY--ES 268

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----------LLFRSTMVGDDV 320
             +   +  L  +  VY G LPPPKSK  Q     +             LFRS+  GD+V
Sbjct: 269 GTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPAQPQPDEEGVTAAEDLTLFRSSAYGDEV 328

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DRP+ K+DG+ TYF AD+AY   K +R  D ++ V+G+DH GYV RLEA   A+   +  
Sbjct: 329 DRPVKKADGTPTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAAMEALGASRKD 387

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           ++V+L ++V L R G  +KMSKRAG  ++LR VVDEVG D+ RF+ L R++   LDFD  
Sbjct: 388 LHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVVDEVGRDATRFIFLTRRSDAPLDFDVE 447

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQ 497
             K Q+ +NPVFYVQY +AR  +IF++A++     PD D +       P+E +       
Sbjct: 448 LAKRQTLDNPVFYVQYGHARLAAIFQKAREAGHAVPDFDLEAARTLASPEEQD------- 500

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  +A +P ++  A +A EP+++AFYL +  + FH  ++ G+++   + +  +  K T 
Sbjct: 501 LIRRIAAFPDMLAAAALAYEPHRVAFYLQETIAAFHSWYTQGKKSGE-KVIGPDPVK-TA 558

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L  A+  ++ +GL ++GV +P+ M
Sbjct: 559 ARLFLCRALKQVLANGLAVLGVSAPDRM 586


>gi|220917531|ref|YP_002492835.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782939|sp|B8JBE2|SYR_ANAD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219955385|gb|ACL65769.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 598

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/568 (40%), Positives = 341/568 (60%), Gaps = 29/568 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFIN 90
           +E PRD  HG  + NAAM+L++  G  P  +A+ IV  ++      D+  + IAG GFIN
Sbjct: 32  VEAPRDPKHGDFAVNAAMVLAKQAGRPPRELAQAIVEAVRAADTAGDLAGLEIAGPGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + LSP    + L+  V  G +YGR  +G+G KV +E+VSANPTGPMHVGH R AVVGD +
Sbjct: 92  VRLSPDLWLRTLARAVAEGPDYGRTAVGQGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+ ++G++VTREYY+ND GAQ+ TLA SV  RYQ+ L+     +P   YPG Y+K + 
Sbjct: 152 QGLLRWAGFDVTREYYVNDYGAQVQTLARSVHLRYQE-LHGRTVTMPPKSYPGEYVKDIA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             L  +Y +  L+ PE +WL + +D+SVQ ++ +IR DL A+NI  D + SE   +  + 
Sbjct: 211 AGLKAEYGARFLDAPEAEWLTLFRDHSVQHVLGMIRGDLAAVNISFDRWSSEKALY--ES 268

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKT----------TQKCDMDRKQLLFRSTMVGDDV 320
             +   +  L  +  VY G LPPPKSK            +         LFRS+  GD+V
Sbjct: 269 GTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPPQPQPDEEGVTAAEDLTLFRSSAYGDEV 328

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DRP+ K+DG+ TYF AD+AY   K +R  D ++ V+G+DH GYV RLEA   A+   +  
Sbjct: 329 DRPVKKADGTPTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAAMEALGASRKD 387

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           ++V+L ++V L R G  +KMSKRAG  ++LR VVDEVG D+ RF+ L R++   LDFD  
Sbjct: 388 LHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVVDEVGRDATRFIFLTRRSDAPLDFDVE 447

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQ 497
             K Q+ +NPVFYVQY +AR  +IF++A++     PD D +       P+E +       
Sbjct: 448 LAKRQTLDNPVFYVQYGHARLAAIFQKAREAGHAVPDFDLEAARTLASPEEQD------- 500

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  +A +P ++  A +A EP+++AFYL +  + FH  ++ G+++   + +  +  K T 
Sbjct: 501 LIRRIAAFPDMLAAAALAYEPHRVAFYLQETIAAFHSWYTQGKKSGE-KVIGPDPVK-TA 558

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L  A+  ++ +GL ++GV +P+ M
Sbjct: 559 ARLFLCRALKQVLANGLAVLGVSAPDRM 586


>gi|330814070|ref|YP_004358309.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487165|gb|AEA81570.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 566

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/564 (42%), Positives = 340/564 (60%), Gaps = 30/564 (5%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI----AELIVARIKIDPDVDSVFIAG 85
           ++I +E P+  + G L+ NA +IL+     +PL I    AELI  + K   ++D   +A 
Sbjct: 25  EKISVEPPKQTSFGDLAFNAPLILAAEFKKNPLEIGSEIAELIKKKFKEFENID---VAK 81

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFINL L  ++    LS        + + +     K+NIE+VSANPTGP+HVGHCR AV
Sbjct: 82  PGFINLKLKNNFWISYLSDFNT----HNKKISSSKKKINIEYVSANPTGPLHVGHCRGAV 137

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GD LA+L++F G +VT+EYYIND G QI+  + SVF R Q+   N    L +G YPG Y
Sbjct: 138 YGDVLANLLSFVGEDVTKEYYINDYGNQIHMFSKSVFARIQEIKENIKFPLDQGLYPGDY 197

Query: 206 LKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           L  +   +   K  +++ N+  EK    +   ++   M +I+ DL AL IQHD+FISE D
Sbjct: 198 LIEIANNIIKKKLITDISNY--EKIKDQLGSAAMSEAMLMIKSDLLALGIQHDLFISEKD 255

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
               D   I   I+ L ++  +YEG+L  PK    +  +  R QLLF+ST  GDDVDR L
Sbjct: 256 LVSKDL--ISKTIEILNQKQCIYEGVLAKPKGNEIEDWE-PRSQLLFKSTKFGDDVDRAL 312

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            KSDG++TYFA D+AY   K ER FD  I V+G+DH+GY+KRL+A   A+S+ KA     
Sbjct: 313 KKSDGTWTYFANDVAYHAYKLERKFDKYINVLGADHAGYLKRLKACVDALSDFKADFECK 372

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            C+LV+L++ G P KMSKRAGDFIT + +V  VG D+VRFMM++R N   LDFDF  V E
Sbjct: 373 TCQLVKLFKSGEPYKMSKRAGDFITAKELVKAVGVDAVRFMMIYRSNDSQLDFDFDLVTE 432

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           ++KENPVFYVQYA AR  S+ R+ K    +F      L   NV          E++LI  
Sbjct: 433 KTKENPVFYVQYASARIHSVLRKTKFDNSVFEKSHLGLLTSNV----------EIELIKK 482

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L+ +P+ IE A    EP+++ +YLYDL+S  H +W+ G+E+   + ++  +  L   R+ 
Sbjct: 483 LSLWPKTIELAARNLEPHRIPYYLYDLSSSLHSYWNLGKEDSSFKIIENPDINLVHARVF 542

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L++ + S+I SGL+I+GV +P  M
Sbjct: 543 LLNKILSVIKSGLSILGVNAPETM 566


>gi|117924014|ref|YP_864631.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|238685476|sp|A0L5I2|SYR_MAGSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|117607770|gb|ABK43225.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 575

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/575 (40%), Positives = 345/575 (60%), Gaps = 45/575 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS-VFIAGKG 87
           L  I +ERP+D +HG  S N AM+L++   + P  +A+ +V  +     V S   IAG G
Sbjct: 28  LGGIKVERPKDKSHGDFSINTAMVLAKQARMKPRDLAQRLVDALPSGQGVVSRCEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN +++P  LR +++ ++  G  YG+  +G G KV +EFVSANPTGPMHVGH R AV G
Sbjct: 88  FINFFVTPERLRGVVADVLQRGGSYGQGNVGAGQKVLVEFVSANPTGPMHVGHGRGAVTG 147

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA ++  +GY V REYY+NDAG Q+  L  SV  RY+Q L+ +  ++ EG YPG Y+ 
Sbjct: 148 DVLARILECAGYAVQREYYLNDAGVQVQVLGRSVMLRYRQ-LFGDAVEVAEGCYPGDYVV 206

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVK-----------DYSVQAMMKIIRDDLKALNIQH 256
            + + L +K         ++KWL + +           ++++Q ++  I+ DL  LNI+ 
Sbjct: 207 DIARALKEK--------DQDKWLEVARAEPDEYPREMLEFAMQQVLTWIKADLARLNIRF 258

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D + SE   H      I   ++ L+++G +YEG+L PPK K ++     R QLLF++T  
Sbjct: 259 DHWFSEFSLH--SEGRIEHALEVLSQKGCLYEGVLEPPKGKKSEAW-ASRPQLLFKATDF 315

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+VDR L KSDGSYTYFAAD+AY   K ERGF+ ++ + G+DH GYV+R++A   A++ 
Sbjct: 316 GDEVDRALRKSDGSYTYFAADVAYHLNKAERGFERLVNIWGADHGGYVRRVQAALGALTG 375

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K+  ++V+L ++V L R G P+KMSKRAG F+TL  VV+   SD+VRF  L R +   LD
Sbjct: 376 KQNLLDVVLIQMVNLTRGGEPVKMSKRAGTFVTLEEVVEATSSDAVRFWFLSRGSGAQLD 435

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD------FDLFPRNVIPQESE 490
           FD      ++ +NPV+YVQYA+AR  SI+ +A+     L        DL P   + + +E
Sbjct: 436 FDLDLAVAKNNDNPVYYVQYAHARICSIWDKAQHEGVALQAQGWSGVDLSP---LGEGAE 492

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
           +D     LI  L  +P V+E A + QEP+++ +YL DLA+ FH  ++    + R+  V A
Sbjct: 493 WD-----LIRKLDLFPDVVEGAAVHQEPHRIPYYLLDLAAAFHTFYN----SHRIMDVDA 543

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R     RL L+ AV  +I +GL ++GV+ P  M
Sbjct: 544 GTRD---ARLVLILAVKQVIANGLELLGVQQPRSM 575


>gi|91763297|ref|ZP_01265261.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717710|gb|EAS84361.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 577

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/567 (39%), Positives = 354/567 (62%), Gaps = 29/567 (5%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKG 87
           L+ I ++ P       +STN AM+LS+     P+ IA +++  IK  D  ++S+ +A  G
Sbjct: 30  LNGINVDIPPSNFDCDISTNVAMVLSKANKKSPIDIANILIELIKNEDEKIESISVAKPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+     Y    + SI  +  +YG N   K  K  IEFVSANPTGP+HVGHCR A++G
Sbjct: 90  FINIKFKTIYWNNFIKSINQNHKDYGVNNKEKKQKYLIEFVSANPTGPLHVGHCRGAILG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-----DSDLPEGYYP 202
           D +++++ F+ ++V++EYY+ND G QI     SVF+R ++ L+N      +SDL    YP
Sbjct: 150 DVISNILIFNKHDVSKEYYVNDYGNQIINFTKSVFFRIREILFNEKFPIENSDL----YP 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY---SVQAMMKIIRDDLKALNIQHDIF 259
           G YL  + K +    S+++L F  +K+  + K+    SV   +K+I+++L  L I HD F
Sbjct: 206 GDYLVGIAKNIIK--SNKVLKF--DKFENVSKELTLLSVSESLKLIKNNLSNLGIVHDRF 261

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE D    +   ++  ID L  +  VY G +  PK +  +   ++R+QLLF+ST  GDD
Sbjct: 262 TSETDIVLNNE--VQKAIDKLKEKKLVYSGKIKAPKGENDENW-VEREQLLFKSTDFGDD 318

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR L KSD S+TYFA+D+AY   K  R +D +I ++G+DH+GY+KR+ +V  A+S  K 
Sbjct: 319 KDRALQKSDKSWTYFASDVAYHDNKLNRNYDTLINILGADHAGYIKRITSVVEALSGDKK 378

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++   + +LV+L +DG P KMSKR GD+IT+  ++ EVG D+ RF+ML R +   LDFDF
Sbjct: 379 KLICKVSQLVKLIKDGKPFKMSKRKGDYITVEDLIAEVGKDATRFIMLNRSSDVELDFDF 438

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQL 498
            KVKE+SK+NP++YVQY YAR  S+FR    +I  DL       N+   E E+   E+++
Sbjct: 439 TKVKEKSKDNPLYYVQYCYARISSVFRHVNLNIENDL-------NIKDYEFEYTGDEIKI 491

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  +AE+P+ IE A++  EP+++  YLY+L+S FH +W+ G+++   RF+    +K++  
Sbjct: 492 LKKIAEWPKCIEAASLRLEPHRIPVYLYELSSEFHSYWNMGKDDQSKRFINE-QKKISND 550

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           +L  +  ++++I SG+NI+GV++P +M
Sbjct: 551 KLVFLKVISNVIKSGMNIVGVDTPQKM 577


>gi|86157949|ref|YP_464734.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109894970|sp|Q2II14|SYR_ANADE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85774460|gb|ABC81297.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 598

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/568 (40%), Positives = 346/568 (60%), Gaps = 29/568 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFIN 90
           +E PRD  HG  + NAAM+L++  G  P  +A+ IV  ++      D+  + IAG GFIN
Sbjct: 32  VEAPRDPKHGDFAVNAAMVLAKQAGKPPRELAQAIVEAVRAADTAGDLAGLEIAGPGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + LSP    + L+  V  G  YGR  +G+G KV +E+VSANPTGPMHVGH R AVVGD +
Sbjct: 92  VRLSPDLWLRTLARAVAEGPAYGRTAVGQGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+ ++G++V+REYY+ND GAQ+ TLA SV  RYQ+ L+     +P   YPG Y+K + 
Sbjct: 152 QGLLRWAGFDVSREYYVNDYGAQVQTLARSVHLRYQE-LHGRAVTMPPKSYPGEYVKDIA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             L  +Y +  L+ PE +WL + +D++VQ ++ +IR+DL A+NI  D + SE   +  + 
Sbjct: 211 AGLKAEYGARFLDAPEAEWLTLFRDHAVQHVLGMIREDLAAVNISFDRWSSEKALY--ES 268

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQ---KCDMDRKQL-------LFRSTMVGDDV 320
             +   +  L  +  VY G LPPPKSK  Q   +   D + +       LFRS+  GD+V
Sbjct: 269 GTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPPQAQPDEEGVTAAEDLTLFRSSAYGDEV 328

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DRP+ K+DG+ TYF AD+AY   K +R  D ++ V+G+DH GYV RLEA   A+   +  
Sbjct: 329 DRPVKKADGTPTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAAMEALGASRKD 387

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           ++V+L ++V L R G  +KMSKRAG  ++LR VVDEVG D+ RF+ L R++   LDFD  
Sbjct: 388 LHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVVDEVGRDATRFIFLTRRSDAPLDFDVE 447

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQ 497
             K+Q+ +NPVFYVQY +AR  +IF++A++     P+ D D       P+E +       
Sbjct: 448 LAKKQTLDNPVFYVQYGHARLAAIFQKAREAGHAVPEFDLDAARTLGSPEEQD------- 500

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  +A +P ++  A +A EP+++AFYL +  + FH  ++ G+++   + +  +  K T 
Sbjct: 501 LIRRIAAFPDLLAAAALAYEPHRVAFYLQETIAAFHSWYTQGKKSGE-KVIGPDPVK-TA 558

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L  A+  ++ +GL ++GV +P+ M
Sbjct: 559 ARLFLCRALKQVLANGLAVLGVSAPDRM 586


>gi|71083662|ref|YP_266382.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|109895015|sp|Q4FM10|SYR_PELUB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71062775|gb|AAZ21778.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 577

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/556 (39%), Positives = 350/556 (62%), Gaps = 30/556 (5%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSY 97
           DC    +STN AM+LS+     P+ IA +++  IK  D  ++S+  A  GFIN+     Y
Sbjct: 43  DC---DISTNVAMVLSKANKKSPIDIANILIELIKNEDEKIESISAAKPGFINIKFKTIY 99

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               + SI  +  +YG N   K  K  IEFVSANPTGP+HVGHCR A++GD +++++ F+
Sbjct: 100 WNNFIKSINQNHKDYGVNNKEKKQKYLIEFVSANPTGPLHVGHCRGAILGDVISNILIFN 159

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-----DSDLPEGYYPGVYLKHVGKE 212
            ++V++EYY+ND G QI     SVF+R ++ L+N      +SDL    YPG YL  + K 
Sbjct: 160 KHDVSKEYYVNDYGNQILNFTKSVFFRIREILFNEKFPIENSDL----YPGDYLVGIAKN 215

Query: 213 LADKYSSELLNFPEEKWLPIVKDY---SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           +    S+++L F  +K+  + K+    SV   +K+I+++L  L I HD F SE D    +
Sbjct: 216 IIK--SNKVLKF--DKFENVSKELTLLSVSESLKLIKNNLSNLGIVHDRFTSETDIVLNN 271

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              ++  ID L  +  VY G +  PK +  +   ++R+QLLF+ST  GDD DR L KSD 
Sbjct: 272 E--VQKAIDKLKEKKLVYSGKIKAPKGEDDENW-VEREQLLFKSTDFGDDKDRALQKSDK 328

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           S+TYFA+D+AY   K  R +D +I ++G+DH+GY+KR+ +V  A+S  K ++   + +LV
Sbjct: 329 SWTYFASDVAYHDNKLNRNYDTLINILGADHAGYIKRITSVVEALSGDKKKLICKVSQLV 388

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L +DG P KMSKR GD+IT+  ++ EVG D+ RF+ML R +   LDFDF KVKE+SK+N
Sbjct: 389 KLIKDGKPFKMSKRKGDYITVEDLIAEVGKDATRFIMLNRSSDVELDFDFTKVKEKSKDN 448

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P++YVQY YAR  S+FR    +  +++ DL   N+   E  +   E++++  +AE+P+ I
Sbjct: 449 PLYYVQYCYARISSVFRH---VNLNIENDL---NIKDYEFAYTGDEIKILKKIAEWPKCI 502

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A++  EP+++  YLY+L+S FH +W+ G+E+   RF+    +K++  +L  +  ++++
Sbjct: 503 EAASLRLEPHRIPVYLYELSSEFHSYWNMGKEDQSKRFINE-QKKISNDKLVFLKVISNV 561

Query: 570 INSGLNIIGVESPNEM 585
           I SG++I+GV++P +M
Sbjct: 562 IKSGMDIVGVDTPQKM 577


>gi|254455816|ref|ZP_05069245.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082818|gb|EDZ60244.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 576

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/554 (38%), Positives = 343/554 (61%), Gaps = 27/554 (4%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSY 97
           DC    +STN AM+LS+     P+ +AE I   IK  DP ++++ +   GFIN+   P +
Sbjct: 43  DC---DISTNVAMVLSKLNKKSPIDLAEQISPIIKNKDPLIENINVVKPGFINIKFKPFF 99

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               +  I+ +   YG N   K     +EFVSANPTGP+HVGHCR A++GD +++++ F+
Sbjct: 100 WSNFIQQIITNSSTYGVNEKEKKLNYLVEFVSANPTGPLHVGHCRGAILGDVISNVLIFN 159

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
            ++VT+EYY+ND G QI     SV++R ++  +N      E  YPG YL    K +    
Sbjct: 160 KHKVTKEYYVNDYGNQIINFTRSVYFRIRELKFNETFPNNEDLYPGDYLIDFAKNIVSSN 219

Query: 218 SSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           S   +NF       EK   +    S++  + +I+ +LK+L I HD F+SE +    +   
Sbjct: 220 SD--INFDNYDDISEKLTTL----SIEQALLLIKKNLKSLGINHDNFVSEKNIVVNNE-- 271

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + ++I  L    +VY+G +  P  +  Q   ++R+QLLF+ST  GDD DR L KSDGS+T
Sbjct: 272 VEEVIKFLEASKFVYKGKIKAPAGEDDQNW-VEREQLLFKSTDFGDDKDRALQKSDGSWT 330

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY K K +R FD +I ++G+DH+GY+KR+ +   A+S  K ++   + +LV+L 
Sbjct: 331 YFASDVAYHKNKVDRNFDYLINILGADHAGYIKRISSSVEALSGTKGKLICKVSQLVKLI 390

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKR GD+IT+  ++ EVG D+ RF+ML R +   LDFDF  VKE+SK+NP++
Sbjct: 391 KDKKPFKMSKRKGDYITVDDLITEVGKDATRFIMLNRSSDVELDFDFDAVKEKSKDNPLY 450

Query: 453 YVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           YVQY YAR  S+FR   KD+  ++D D +         E+   E++++  ++E+P+ IE 
Sbjct: 451 YVQYCYARISSVFRHLNKDLNSNIDIDDY-------SFEYSYDEIKILKKVSEWPKCIEA 503

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A+   EP+++  YLY+LAS FH +W+ G++ P  RF+  + ++++  +L  + A++++I 
Sbjct: 504 ASNKLEPHRIPIYLYELASEFHSYWNLGKQQPEKRFIN-DQKEISPDKLVFLKAISNVIK 562

Query: 572 SGLNIIGVESPNEM 585
           SG++I+GV++P++M
Sbjct: 563 SGMSIVGVDTPDKM 576


>gi|218678655|ref|ZP_03526552.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 297

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/301 (64%), Positives = 236/301 (78%), Gaps = 6/301 (1%)

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  +
Sbjct: 1   MMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPE 60

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH
Sbjct: 61  DWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADH 119

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRLEAVA  VSE KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG D
Sbjct: 120 GGYVKRLEAVARGVSEGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRD 179

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL- 479
           SVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDLD    
Sbjct: 180 SVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDLDVSTV 239

Query: 480 -FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              + V       D +ELQL+  LAE+PRV+E A  +QEP++LAFYLYDLAS F  HW+ 
Sbjct: 240 ELAKTVA---GIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRLAFYLYDLASSFPAHWNK 296

Query: 539 G 539
           G
Sbjct: 297 G 297


>gi|309390229|gb|ADO78109.1| arginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 553

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/555 (39%), Positives = 322/555 (58%), Gaps = 38/555 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
            + IE PR+  HG  +TN AM+L+   G++P  IAE+IVA  + +  V+S  IAG GFIN
Sbjct: 37  EVSIEVPREKEHGDYATNLAMVLAGKAGMNPRKIAEIIVANFESEI-VESTNIAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L+ ++L   L  I   G +YG+   GKG  V +EFVSANPTGP+HVGH R AVVGD  
Sbjct: 96  FKLNNAWLWNNLKLITERGADYGKIDAGKGKSVQVEFVSANPTGPLHVGHSRGAVVGDVT 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           AS+M  +GY+V REYYINDAG Q++ LA S   RY++ L   + ++PE  Y G Y+K + 
Sbjct: 156 ASIMETAGYDVEREYYINDAGNQMDILAESTLLRYREIL-GEEIEMPEDVYAGDYIKEIA 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +EL  +Y ++L+   E K L I ++Y+ Q M+K I  DL    I+ D + SE   H   P
Sbjct: 215 QELYAEYGADLIEKEESKKLEICREYAYQKMLKNIEADLGEFGIEFDNWFSERSLH---P 271

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   I+ L  +GY++E                +   L F++T  GDD DR ++KSDGS
Sbjct: 272 DKIEAAIEILKEKGYIFE----------------EEDALWFKATDFGDDKDRVIIKSDGS 315

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY AAD+AY   K ERGFD +I V G+DH GY+ R+ AV  A   K  ++ V++ ++V 
Sbjct: 316 PTYLAADMAYHLDKLERGFDKLINVWGADHHGYIPRVRAVIEAFGHKPDKLEVIVVQMVT 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R+G  + MSKRAG F+T+  V  EVG D+ R+  + R     LDFD    KE+S  NP
Sbjct: 376 LLRNGKKMPMSKRAGSFVTMNEVNKEVGIDAARYYYVMRSTDSHLDFDLELAKEESTNNP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI   ++      + DL              SE+ L+  LA++P  I+
Sbjct: 436 VYYVQYAHARIHSIIDNSELEAKAENLDLLTHE----------SEIALMKMLAKFPEEIK 485

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            +  +++P+ L  Y YDLA+ FH  +++ R       V  ++++L   RL LV+A   ++
Sbjct: 486 MSAESRQPHHLTTYAYDLATEFHSFYNNCR-------VNTDSKELAEARLYLVNAARQVL 538

Query: 571 NSGLNIIGVESPNEM 585
            + L ++G+ +P +M
Sbjct: 539 KNVLTVLGISAPEQM 553


>gi|322419462|ref|YP_004198685.1| arginyl-tRNA synthetase [Geobacter sp. M18]
 gi|320125849|gb|ADW13409.1| arginyl-tRNA synthetase [Geobacter sp. M18]
          Length = 554

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/559 (38%), Positives = 325/559 (58%), Gaps = 31/559 (5%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGK 86
           ++  I +E+P    HG  +TN AM +++     P  +AE++V ++    + ++S+ IAG 
Sbjct: 26  VVPAINVEKPAHAEHGDFATNVAMQMAKQERKAPRAVAEILVQKLAGASELIESLEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN ++  S  RK+LS I  +G  YG++ +G G KV +EFVSANPTGP+H+GH R A  
Sbjct: 86  GFINFFIKDSAWRKVLSEIDRAGDRYGKSSVGAGKKVQVEFVSANPTGPLHIGHGRGAAT 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +ASL+  +G++V REYYINDAG Q+NTL LS   RYQ+ L     D PE  Y G Y+
Sbjct: 146 GDAVASLLCSAGFDVQREYYINDAGNQMNTLGLSGLLRYQE-LLGQKIDFPENCYQGDYI 204

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K + ++   ++    LN P+E+            ++K I +DL+   I+ D + SE    
Sbjct: 205 KDIARDAIARHGDRFLNAPQEEGGAFFAKMGGDLILKGIDEDLQDFGIRFDNWFSEQSLF 264

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             D   +   I  +  +G++YE               +D   L F++T  GDD DR +++
Sbjct: 265 --DEGKVTSAIAEMQEKGHIYE---------------LD-GALWFKTTAFGDDKDRVVVR 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           S+G  TYFA+D+AY + K+ RGFD +I V G+DH GYV RL++V   +  K   + ++L 
Sbjct: 307 SNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHHGYVPRLKSVVQGLGRKPEDLGIILV 366

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +LV L RDG P+ MS R+G+F+TL+ VVDEVG D+ RF  L R++   LDFD    K QS
Sbjct: 367 QLVSLLRDGQPVAMSTRSGEFVTLKEVVDEVGRDAARFFFLMRRSDSQLDFDLELAKRQS 426

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +NPV+YVQYA+AR +SIF  A++      FD     ++  ES  D S   LI  L+ YP
Sbjct: 427 SDNPVYYVQYAHARIKSIFDTARERGVAPAFDGVRLELL--ESADDMS---LIKKLSLYP 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            ++E A +  EP+++ +YL +LA  FH  ++      + R +     +LT  RL L+H V
Sbjct: 482 EILEGAAVNFEPHRITYYLQELAGEFHSFYN------KSRVITPEEPELTQARLFLLHCV 535

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  + + L ++G+ +P  M
Sbjct: 536 AITLKNALTVLGISAPERM 554


>gi|89101282|ref|ZP_01174100.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084002|gb|EAR63185.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 556

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/592 (37%), Positives = 339/592 (57%), Gaps = 43/592 (7%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +     S LK  +K+  I   +  E++I D +++E P++ AHG  STN AM L+R   
Sbjct: 1   MNIVEQVQSNLKEEIKQAVIKAGLAAEEQIPD-VILETPKEKAHGDYSTNMAMQLARIAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE ++         ++ + IAG GFIN Y++ SYL  ++ +++ +G +YG    
Sbjct: 60  KAPRMIAEQLIENFDSSKASIEKIEIAGPGFINFYMNNSYLTNLIPTVLDAGAQYGETNT 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G KV IEFVSANPTG +H+GH R A VGD+L+S++A +GY+V+REYYINDAG QIN L
Sbjct: 120 GNGQKVQIEFVSANPTGDLHLGHARGAAVGDSLSSILAKAGYDVSREYYINDAGNQINNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           ALSV  RY QAL   + ++P   Y G  +  +G+ LAD++  + +N  E++     ++Y 
Sbjct: 180 ALSVEARYFQAL-GMEKEMPADGYHGADIIGIGQRLADEFGDKYVNADEKERFDAFREYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++  M+ ++ DL+   +  D++ SE   ++     I D +  L   G+VYE         
Sbjct: 239 LKYEMEKLKKDLEDFRVPFDVWYSETSLYQN--GKIDDALKALKENGHVYE--------- 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  +     FRST  GDD DR L+K+DGSYTY   D+AY K K ERGF+ +I V G
Sbjct: 288 -------EEGATWFRSTEFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINVWG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+   K  + V + +LV LY++G  +KMSKR G  +T+R +VDEV
Sbjct: 341 ADHHGYIPRMKAAIQALGYGKDALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVDEV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFP 473
           G D+VR+    R     +DFD      QS +NPV+Y QYA+AR  SI RQ ++    +  
Sbjct: 401 GLDAVRYFFAMRSADTHMDFDLDLAVSQSNDNPVYYAQYAHARISSILRQGEEQGMALSA 460

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D DF L     I  E E D     L+  L E+P+ +  A   + P+++  Y+++LAS FH
Sbjct: 461 DADFSL-----ISAEKEID-----LLKKLGEFPQAVAEAAEKRMPHRITNYIFELASAFH 510

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++        + + ++N + T  RL L+ AV + + + L +IGV +P +M
Sbjct: 511 SFYN------AEKVLDSDNPEKTKARLGLIKAVQTALRNALKLIGVSAPEKM 556


>gi|95930475|ref|ZP_01313211.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133515|gb|EAT15178.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 554

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/568 (39%), Positives = 327/568 (57%), Gaps = 32/568 (5%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           D +  +  +I D   IE P    HG  + NAAM+++R     P  IAE++VA++K    +
Sbjct: 18  DAETLISNEIPD-FAIEVPNRSDHGDFAVNAAMLMARTEKKAPRQIAEILVAQLKEQQGL 76

Query: 79  -DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
            D V IAG GFIN +LS S   + L  I   G  +G+  +G G +V +EFVSANPTGP+H
Sbjct: 77  WDRVEIAGPGFINFFLSASCWHEALKQIYAQGAGFGKCDVGAGKRVQVEFVSANPTGPLH 136

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH R A  GD +AS++  +G+EV REYYINDAG Q++TL  S++ RY Q L   + D P
Sbjct: 137 IGHGRGAATGDAVASVLQEAGFEVQREYYINDAGNQMDTLGRSIYLRYCQ-LQGQEVDFP 195

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           E  Y G Y++   +++ D      L+  E   +        +A+ + I  DL+   I+ D
Sbjct: 196 EDCYQGDYIRDYAQQVLDGEGRRFLDMEEADAIAWFSREGGEAIRQGIDADLQQFGIRFD 255

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            + SE   +  D   ++  ID L R GY YE                    + FR+T  G
Sbjct: 256 NWYSEQTLY--DRDLVKQGIDALTRDGYTYE----------------QDGAIWFRTTDFG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           DD DR L++S+G+ TYFA+D+AY + KY+RGFD +I V G+DH GYV R++AV AA+   
Sbjct: 298 DDKDRVLIRSNGATTYFASDVAYHREKYQRGFDIVIDVWGADHHGYVPRMKAVLAALGRN 357

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
              + ++L +LV L R+G  I MS RAG F+TL+ VVDEVG D+ RF  L R++   LDF
Sbjct: 358 PEDLQIILVQLVNLLREGEQIAMSTRAGKFVTLKEVVDEVGRDACRFFFLMRRSDSQLDF 417

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D    K+QS ENPV+YVQYA+AR  SI R A++        L   + +  E+     ELQ
Sbjct: 418 DLELAKKQSTENPVYYVQYAHARVCSINRNAEES----GVALLGGDEVKLEALTLPEELQ 473

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   ++ YP V+ +A +  EP+K+ FYL +LA+ FH +++  R       V  ++  ++ 
Sbjct: 474 LTKMMSRYPEVVASAALNYEPHKITFYLQELAAQFHSYYNQHR-------VIVDDVDVSQ 526

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL LV+AV  +++S L ++GV +P +M
Sbjct: 527 ARLYLVNAVKQVVSSALTVLGVSAPEKM 554


>gi|197118664|ref|YP_002139091.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690877|sp|B5EEF0|SYR_GEOBB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197088024|gb|ACH39295.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 554

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/555 (37%), Positives = 321/555 (57%), Gaps = 31/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I +E+P    HG  +TN AM +++     P  +AE++VA++    D ++S+ IAG GFIN
Sbjct: 30  INVEKPAHAEHGDFATNVAMQMAKQQRKAPRAVAEILVAKLAGASDLIESLEIAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  S  R+ L+ I  +G  +G++ IG+G KV +EFVSANPTGP+H+GH R A  GD +
Sbjct: 90  FFIKDSAWRRTLTEIDRAGDAWGKSGIGRGKKVQVEFVSANPTGPLHIGHGRGAATGDAV 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ASL++ +G++V REYYINDAG Q+NTL LS   RY++ L     D PE  Y G Y+K + 
Sbjct: 150 ASLLSAAGFDVQREYYINDAGNQMNTLGLSGLLRYKE-LLGEKIDFPETCYQGDYMKDIA 208

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           ++   KY    L   +E  +          ++  I  DL+   I+ D + SE      D 
Sbjct: 209 RDAVTKYGDRFLKVSQEDGVAFFSKMGGDLILAGIDQDLQDFGIRFDHWFSEQSLF--DE 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             ++  I+ +  +G +YE                    L FR+T  GDD DR +++S+G 
Sbjct: 267 GKVKSAIEEMQAKGLIYE----------------QEGALWFRTTDYGDDKDRVVVRSNGV 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY + K+ RGFD +I V G+DH GYV RL++V   +    + + ++L +LV 
Sbjct: 311 TTYFASDIAYHRDKFARGFDWVIDVWGADHHGYVPRLKSVVQGLGRDASDLGIILVQLVS 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG+P+ MS R+G+F+TL+ VVDEVG D+ RF  L R++   LDFD    K QS +NP
Sbjct: 371 LLRDGVPVAMSTRSGEFVTLKEVVDEVGRDAARFFFLMRRSDSQLDFDLELAKRQSNDNP 430

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR +SIF  A++   +  FD     ++ Q  E    +L L+  L+ YP ++E
Sbjct: 431 VYYVQYAHARIKSIFDTARERGVEPRFDSVKLELL-QTPE----DLSLVKKLSVYPEILE 485

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
              +  EP+++ +YL +LA  FH  ++      + R +     +LT  RL L+H VA  +
Sbjct: 486 GGAVNFEPHRITYYLQELAGEFHSFYN------KSRVITPEEPELTQARLFLLHCVAITL 539

Query: 571 NSGLNIIGVESPNEM 585
            + L ++G+ +P  M
Sbjct: 540 KNALTVLGISAPERM 554


>gi|253700562|ref|YP_003021751.1| arginyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511647|sp|C6E805|SYR_GEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|251775412|gb|ACT17993.1| arginyl-tRNA synthetase [Geobacter sp. M21]
          Length = 554

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 321/560 (57%), Gaps = 41/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I +E+P    HG  +TN AM +++     P  +AE++VA++    D ++S+ IAG GFIN
Sbjct: 30  INVEKPAHAEHGDFATNVAMQMAKQQRKAPRAVAEILVAKLAGASDLIESLEIAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++     R+ LS I  +G  +G++ IG+G KV +EFVSANPTGP+H+GH R A  GD +
Sbjct: 90  FFIKDGAWRRTLSEIDRAGDAWGKSGIGRGKKVQVEFVSANPTGPLHIGHGRGAATGDAV 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ASL++ +G++V REYYINDAG Q+NTL LS   RY++ L     + PE  Y G Y+K + 
Sbjct: 150 ASLLSAAGFDVQREYYINDAGNQMNTLGLSGLLRYKE-LLGEKIEFPETCYQGDYMKDIA 208

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           ++   KY    L   +E+ +          ++  I  DL+   ++ D + SE      D 
Sbjct: 209 RDAVTKYGDRFLKVSQEEGVAFFSKMGGDLILAGIDQDLQDFGVRFDHWFSEQSLF--DE 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I+ +  +G +YE                    L FR+T  GDD DR +++S+G 
Sbjct: 267 GKVNSAIEEMQAKGLIYE----------------QEGALWFRTTDYGDDKDRVVVRSNGV 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY + K+ RGFD +I V G+DH GYV RL++V   +    + + ++L +LV 
Sbjct: 311 TTYFASDIAYHRDKFARGFDWVIDVWGADHHGYVPRLKSVVQGLGRDASDLGIILVQLVS 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG+P+ MS R+G+F+TL+ VVDEVG D+ RF  L R++   LDFD    K QS +NP
Sbjct: 371 LLRDGVPVAMSTRSGEFVTLKEVVDEVGRDAARFFFLMRRSDSQLDFDLELAKRQSNDNP 430

Query: 451 VFYVQYAYARCRSIFRQAKD-----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           V+YVQYA+AR +SIF  A++     +F  + F+L      P+       +L LI  L+ Y
Sbjct: 431 VYYVQYAHARIKSIFDTARERGVEPLFDSVKFELLQ---TPE-------DLSLIKKLSVY 480

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++E   +  EP+++ +YL +LA  FH  ++      + R +     +LT  RL L+H 
Sbjct: 481 PEILEGGAVNFEPHRITYYLQELAGEFHSFYN------KSRVITPEEPELTQARLFLLHC 534

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA  + + L ++G+ +P  M
Sbjct: 535 VAITLKNALTVLGISAPERM 554


>gi|332971382|gb|EGK10340.1| arginine--tRNA ligase [Desmospora sp. 8437]
          Length = 564

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/549 (39%), Positives = 317/549 (57%), Gaps = 32/549 (5%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPS 96
           R+ +HG L+TN AM L+R    +P  IAE IV  +  D   V  + IAG GFIN ++  S
Sbjct: 47  REKSHGDLATNMAMQLARIAKKNPRQIAEAIVDGMNRDRVAVREIHIAGPGFINFFIDRS 106

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +LR++L  I  +G  YGR+  G G KV +EFVS NPTG +H+GH R A +GD L +++  
Sbjct: 107 HLREVLVEIGRAGDAYGRSSAGNGEKVLVEFVSVNPTGSLHLGHARGAAIGDVLCNVLEA 166

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           +GY+VTREYYINDAG QI  + LS+  RY++AL     D PE  Y G  +  +GK LA++
Sbjct: 167 AGYDVTREYYINDAGNQIRNMTLSLEARYREAL-GRKVDFPEDGYRGQDIVDLGKRLAEE 225

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
               LL+  EE+    ++ Y +  +++ I+ DLK   +Q D + SE   H  D   +++ 
Sbjct: 226 EGDRLLSLDEEERFAWIRRYGLNRLLEGIKKDLKEYRVQFDSWFSEQSLH--DSGSVQES 283

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++ L R+G  YE                    L  +S+  GDD DR L+K DGSYTY   
Sbjct: 284 VEELTRRGQTYE----------------QDGALWLKSSQFGDDKDRVLVKQDGSYTYITP 327

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D+AY + KY RGFD ++ + G+DH GYV R++A  AA+     ++  L+ ++V+LY+ G 
Sbjct: 328 DIAYHRNKYNRGFDRIVDIFGADHHGYVPRMKAAMAALGFDVDKMTFLITQMVKLYQGGE 387

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
            +KMSKR G  ITL  +++EVG D+ R+    R     LDFD      QS ENPVFYVQY
Sbjct: 388 LVKMSKRTGKAITLAELMEEVGVDATRYFFASRGPDSHLDFDMDLAVSQSNENPVFYVQY 447

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  S+FR+A +   ++  D    + + +E+EFD     L+  LAE+P  I  A    
Sbjct: 448 AHARINSVFRRAGEQGMEVKLDPDSLSALQEEAEFD-----LLQKLAEFPEEIATAAKQM 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+++  YLYDLA+    +++        R +Q + R LT  RL L+  VA ++ SGL +
Sbjct: 503 APHRMVRYLYDLATQLQSYYNA------YRVIQEDER-LTRARLSLLLGVAQVLKSGLRM 555

Query: 577 IGVESPNEM 585
           IGV +P +M
Sbjct: 556 IGVSAPEQM 564


>gi|294501901|ref|YP_003565601.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351838|gb|ADE72167.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 556

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/589 (36%), Positives = 340/589 (57%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +++   K  + EK  L  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y++ SYL +++ +IV +G  YG+  +G
Sbjct: 61  APRVIAEELVANFDKSQASIEKIDIAGPGFINFYMNNSYLAELIPTIVKAGEAYGQTNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   + ++P   Y G  + ++GKELA ++  +  N  EE+     + Y +
Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYANASEEERFEFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL+   ++ D++ SE   ++ D   I   ++ L +QG+VYE          
Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKNDKISI--ALETLKKQGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K +RGFD +I + G+
Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + ++V+LY++G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+ R+    R     LDFD      QS ENPV+Y QYA+AR  SI RQ ++  I     
Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMGIQSTSG 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            DL   ++I  E      E++L+  + E+P+ +  A   + P+++  Y++DLAS FH  +
Sbjct: 462 ADL---SLISAE-----KEMELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + + ++N + +  R++LV AV   + + L +IGV +P +M
Sbjct: 514 N------AEKVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556


>gi|295707249|ref|YP_003600324.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804908|gb|ADF41974.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 556

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/589 (36%), Positives = 340/589 (57%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +++   K  + EK  L  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y++ SYL +++ +IV +G  YG+  +G
Sbjct: 61  APRVIAEELVANFDKSKASIEKIDIAGPGFINFYMNNSYLTELIPTIVKAGEAYGQTNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   + ++P   Y G  + ++GKELA ++  + +N  EE+     + Y +
Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYVNASEEERFEFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL+   ++ D++ SE   ++ D   +   ++ L +QG+VYE          
Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKNDKISV--ALETLKKQGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K +RGFD +I + G+
Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + ++V+LY++G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+ R+    R     LDFD      QS ENPV+Y QYA+AR  SI RQ ++  I     
Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMGIQSTSG 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            DL   ++I  E      E +L+  + E+P+ +  A   + P+++  Y++DLAS FH  +
Sbjct: 462 ADL---SLISAE-----KETELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + + ++N + +  R++LV AV   + + L +IGV +P +M
Sbjct: 514 N------AEKVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556


>gi|312142763|ref|YP_003994209.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903414|gb|ADQ13855.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 553

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/582 (38%), Positives = 338/582 (58%), Gaps = 40/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A   S L   LK+   + ++E + +  I +E+PR+  HG  +TN AM  +   G++P  I
Sbjct: 11  AKLISALAESLKKAIYEGELELEGVPEISVEQPREKEHGDYATNLAMAAASQAGMNPRKI 70

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE+IV   + +  V+ + IAG GFIN  L  ++L + L  I     +YG+   G+G +V 
Sbjct: 71  AEIIVDNFEGEG-VEEISIAGPGFINFKLKKNWLYENLKLINKLKDDYGKIDTGQGKRVQ 129

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IEFVSANPTGP+HVGH R AVVGD  AS+M  +GY+V REYYINDAG Q++ LA S   R
Sbjct: 130 IEFVSANPTGPLHVGHSRGAVVGDVCASIMEAAGYDVEREYYINDAGNQMDILAESTLLR 189

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y++ +   +  LPE  Y G Y+  + ++L  +Y  ++L   E+K L I ++++ Q M++ 
Sbjct: 190 YRE-ICGKEIKLPEDVYAGDYVIEIAEDLYQEYGRDILEEEEQKQLDICREFAYQDMLQK 248

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++DL    I+ D + SE   H   P+ I + +D L  +GY+YE                
Sbjct: 249 IKEDLNKFGIEFDNWFSERTLH---PAKINEAVDVLRDKGYIYE---------------- 289

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   L F+S+  GDD DR ++KSDGS TY AAD+AY   K ERGFD +I V G+DH GY+
Sbjct: 290 EEAALWFKSSEFGDDKDRVVIKSDGSPTYLAADIAYHLDKLERGFDKLINVWGADHHGYI 349

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++AV  A    +  + +++ ++V L R+G  ++MSKRAG F+T+  V +EVG+D+ R+
Sbjct: 350 PRMKAVIEAFGYGRDTLEIIVVQMVNLLRNGEKMQMSKRAGSFVTMNEVNEEVGTDAARY 409

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRN 483
             + R     LDFD    KE+S  NPV+YVQYA+AR  SI   A +I PD +   L    
Sbjct: 410 YYIMRSTDSHLDFDLELAKEESSNNPVYYVQYAHARIHSIIDNA-EIEPDSENLKLLS-- 466

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   D +E+ L+  LA +P  I+ +  +++P+ L  Y YDLA+ FH  +++ R   
Sbjct: 467 --------DPAEVDLMKMLASFPEEIKLSAESRQPHHLTAYAYDLATAFHAFYNNCR--- 515

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V  +N +L+  RL LV A   ++ + L ++G+ +P EM
Sbjct: 516 ----VNTDNNELSGARLYLVDAARQVLKNVLTLLGISAPAEM 553


>gi|332703861|ref|ZP_08423949.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554010|gb|EGJ51054.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 553

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/561 (38%), Positives = 338/561 (60%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           + +E P+D   G L+TNAAMIL++  G  P  +A  +  R+    P+++ + +AG GF+N
Sbjct: 26  VSLEPPKDIKFGDLATNAAMILAKQAGKPPREVAAELRERLLGSHPEIERIEVAGPGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              +PS+ + IL  ++  G  +G   +G+  KV +E+VSANPTGP+H+GH R A +GD+L
Sbjct: 86  FSFAPSFWQSILQDVLEQGDRFGALDVGQKKKVLVEYVSANPTGPLHLGHGRGAALGDSL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             ++ F+G++VT E+YINDAG Q+  L +S++ RYQQA +N D +LPE  Y G Y+K + 
Sbjct: 146 VRVLRFAGFDVTTEFYINDAGRQMRLLGMSIWVRYQQA-FNRDVELPEDSYRGEYIKDIA 204

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E+A  + SELL  PE + + + +++ + +++K I+ DL    + HDI+ SE      D 
Sbjct: 205 AEIAASHGSELLQVPEAQAMDVCREHGMLSILKWIKRDLNEFRVSHDIWFSERRLV--DT 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I  L  +G  YE                    L F ST  GDD DR L +S G 
Sbjct: 263 GQVESTIKWLQDKGLAYE----------------QEGALWFNSTRFGDDKDRVLRRSSGE 306

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY RG+D ++ + G+DH GYV R++A A A+ +   Q+ V+L ++V 
Sbjct: 307 LTYFASDIAYHADKYSRGYDLLVDIWGADHHGYVPRMKAAAQALGKDADQLQVVLVQMVN 366

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + R G  I MSKRAG F TL  VV EVG DS RFM + RK+   LDFD   VK+QS +NP
Sbjct: 367 ILRGGEQISMSKRAGTFETLADVVKEVGVDSARFMFMTRKSDSHLDFDLELVKQQSMDNP 426

Query: 451 VFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAEY 505
           V+YVQYA+AR RS+FR+A++    + P +D     R+ +   +  DT E +QL+  +  +
Sbjct: 427 VYYVQYAHARIRSVFRKAREQGLALQPTVD-----RSKLM--ALLDTPEDIQLLKLMEHF 479

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWS-HGRENPRLRFVQANNRKLTMMRLQLVH 564
           P  ++ A  +  P+ ++F+L +LA++ H ++S H       + + A + +LT+ RL L+ 
Sbjct: 480 PDAVDAAAKSLSPHHISFFLRELAALLHRYYSVH-------KVLGAESSQLTLARLLLLD 532

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AVA ++ +GL ++GV +P +M
Sbjct: 533 AVAQVLRNGLQLLGVNAPEQM 553


>gi|329769586|ref|ZP_08260991.1| arginyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838538|gb|EGF88145.1| arginyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 544

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/556 (38%), Positives = 329/556 (59%), Gaps = 36/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E P++  +G  S+N AM L+R L  +P  IAE I++ I  D  ++ + IAG GFIN 
Sbjct: 23  IYVETPKNNDNGDFSSNIAMQLTRVLKKNPRVIAEEIISNIPEDETIEKIEIAGPGFINF 82

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  S L  ++  ++    +YG N +G+G KV +E+VSANPTG +HVGH R A   D+LA
Sbjct: 83  YVKKSSLGSVIEKVLTDNEKYGENNVGQGKKVLLEYVSANPTGTLHVGHARNAAYSDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  SGY+++REYYINDAG QIN L +S   RY+QAL   +++LPE  Y G  +K +G+
Sbjct: 143 RIMKKSGYDLSREYYINDAGNQINNLVISAIVRYKQAL-GLEAELPEDAYHGEDIKVLGQ 201

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L D++   LL    E     ++DY+V   M+ I+ DL    +++D++ SE   +  +  
Sbjct: 202 KLKDEFGDSLL--EREDLESFIRDYAVAYEMENIKKDLGDFGLEYDVYFSEKSLY--ENG 257

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329
            +   +++L  QGYVYE                    L  ++T +G  DD DR L+K+DG
Sbjct: 258 LVDKALESLREQGYVYE----------------KDGALWLKTTALGTGDDKDRVLIKADG 301

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           S TY  +D+AY K K +RGFD ++ V+G+DH GYV RL+A   A+  K  Q+  L+ ++V
Sbjct: 302 SLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYVARLKASIVAMGYKAEQLEALIMQMV 361

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L  +G  +KMSKR G  ITLR ++DEVG+D+ R+ ++ R     LDFDF   KEQS +N
Sbjct: 362 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 421

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P++YVQYA+AR  SI RQA +     DF++   N    E   D   ++L+ +LA +P ++
Sbjct: 422 PLYYVQYAHARICSILRQASE---QGDFNIENCNY---ELLTDEYSVELLKNLAYFPEIV 475

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP+++  YL +LAS FH  +++ +       V   N++ T   L L+ AV   
Sbjct: 476 AQAATNYEPHRICNYLQNLASSFHKFYNNNK-------VITENKEQTESYLALITAVKIT 528

Query: 570 INSGLNIIGVESPNEM 585
           + + L +IGV +P +M
Sbjct: 529 LRNALELIGVSAPEKM 544


>gi|116748008|ref|YP_844695.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116697072|gb|ABK16260.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 559

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/557 (38%), Positives = 325/557 (58%), Gaps = 32/557 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFI 89
           I ++ P+   HG  +TN A+ L+R L  +P  IA  IV  +  DPD  +  V IAG GFI
Sbjct: 32  IELDIPKLPEHGDYATNVALALTRRLKRNPREIAGKIVGGLN-DPDNLLQKVEIAGPGFI 90

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N +  P     IL+ I+     YGR  +G+G +V +EFVSANPTGP+H+GH R A  GD 
Sbjct: 91  NFFFHPRAWHGILTDILADPRNYGRLDLGEGHRVQVEFVSANPTGPLHIGHGRGAATGDA 150

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA+++   GY V REYYINDAG Q++TL  S+++RYQ+AL     + P+ +Y G Y+K +
Sbjct: 151 LANILEACGYAVEREYYINDAGNQMDTLGRSLYFRYQEAL-GEPVEFPDAHYRGEYMKDL 209

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++         L  P ++ LP+   ++   +++ I+DDL    +  D + SE   H  D
Sbjct: 210 ARDFLRDNGDRYLRAPLDEVLPLFTRFAADRILEGIKDDLGEFGVSFDQWFSERSLHAED 269

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              IR  +++L R+G++YE                    + F+ST  GD+ DR +++++G
Sbjct: 270 A--IRRTVEDLNRRGFIYES----------------EGAVWFKSTAFGDEKDRVVIRANG 311

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYFAADLAY + KY+RG+D ++ + G+DH GYV+R+ A   A+   +  + ++L +LV
Sbjct: 312 VSTYFAADLAYHRNKYDRGYDKVVDIWGADHHGYVERMLAGVEALGRNREDLRIVLVQLV 371

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R G P+ MS RAG+F+TLR VVDEVG D+ RF+ L R++   LDFD    K ++ +N
Sbjct: 372 NLLRAGKPVAMSTRAGEFVTLREVVDEVGKDAARFIFLTRRSDSPLDFDLDVAKARTNDN 431

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRV 508
           PVFYVQYA+AR  SIF+ A +    L  D      IP         ELQ+I  L EYP +
Sbjct: 432 PVFYVQYAHARLCSIFQVAAE--RGLVCDWANGKDIPDLGLLTLAQELQIIKFLGEYPAI 489

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + N + + EP+ + +YL++L S+FH +++  R       V  ++ +LT  RL +  A+  
Sbjct: 490 LANCSRSMEPHFIPYYLHELVSLFHSYYNQNR-------VIGDDPELTRARLFMAAAIRE 542

Query: 569 IINSGLNIIGVESPNEM 585
           +I + L ++GV +P +M
Sbjct: 543 VIRNALELLGVSAPEKM 559


>gi|329768518|ref|ZP_08260006.1| arginyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836668|gb|EGF86325.1| arginyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 544

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/560 (38%), Positives = 327/560 (58%), Gaps = 44/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E P++  +G  S+N AM L+R L  +P  IAE I++ I  D  V+ + IAG GFIN 
Sbjct: 23  IHVETPKNTENGDFSSNVAMQLTRVLRKNPRVIAEEIISNIDEDEAVEKIEIAGPGFINF 82

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  S L  ++  I+    +YG N IG+G KV +E+VSANPTG +HVGH R A   D+LA
Sbjct: 83  FVKKSSLGSVVGKILEDDFKYGENNIGQGKKVLLEYVSANPTGTLHVGHARNAAYSDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  SGY+++REYYINDAG QIN L +S   RY+QAL   D++LP+  Y G  +K +G+
Sbjct: 143 RIMKKSGYDLSREYYINDAGNQINNLVISAIVRYKQAL-GMDAELPDDAYHGEDIKVLGQ 201

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L D++   LL    E     +++Y+V   M+ I+ DL    +++D+F SE   +  +  
Sbjct: 202 KLKDEFGDSLL--EREDLNEFIREYAVAYEMENIKKDLGDFGLEYDVFFSEKSLY--ENG 257

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329
            +   +++L  QG+VYE                    L   +T +G  DD DR L+K+DG
Sbjct: 258 LVDKALESLREQGFVYE----------------KDGALWLETTALGTGDDKDRVLIKADG 301

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           S TY  +D+AY K K +RGFD +I V+G+DH GY+ RL+A   A+  K  Q+ VL+ ++V
Sbjct: 302 SLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYIARLKASIVAMGYKAEQLEVLIMQMV 361

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L  +G  +KMSKR G  ITLR ++DEVG+D+ R+ ++ R     LDFDF   KEQS +N
Sbjct: 362 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 421

Query: 450 PVFYVQYAYARCRSIFRQAKDIFP----DLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           P++YVQYA+AR  SI RQA +       + D++L            D   + L+ +LA Y
Sbjct: 422 PLYYVQYAHARICSILRQAAEQVEYDVKNCDYELLT----------DEYSVDLLKNLAYY 471

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++  A    EP+++  YL  LAS FH  +++ +       V   N++ T   L L+ A
Sbjct: 472 PEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK-------VITENKEQTQSYLALITA 524

Query: 566 VASIINSGLNIIGVESPNEM 585
           V   + + L++IGV +P +M
Sbjct: 525 VKITLRNALDLIGVSAPEKM 544


>gi|317496051|ref|ZP_07954411.1| arginyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913626|gb|EFV35112.1| arginyl-tRNA synthetase [Gemella moribillum M424]
          Length = 544

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 322/560 (57%), Gaps = 44/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E P++  +G  S+N AM L+R L  +P  IAE I+A I  D  V+ V IAG GFIN 
Sbjct: 23  IYVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAEEIIANIPADDAVEKVEIAGPGFINF 82

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  S L  I+  I+    +YG N  G+G KV +E+VSANPTG +HVGH R A   D+LA
Sbjct: 83  YVKKSSLGSIIEKILADDCKYGENNTGQGKKVLLEYVSANPTGTLHVGHARNAAYSDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  SGY+++REYYINDAG QIN L +S   RY+QAL   ++++PE  Y G  +K +G+
Sbjct: 143 RIMKKSGYDISREYYINDAGNQINNLVISAIVRYKQAL-GLEAEMPEDAYHGEDIKVLGQ 201

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L D++S  LL    E     ++DY+V   M  I+ DL    +++D++ SE   +  +  
Sbjct: 202 KLKDEFSDSLL--EREDLESFIRDYAVAYEMDNIKKDLGDFGLEYDVYFSEKSLY--EDG 257

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329
            +   + +L  QG+VYE                    L   +T +G  DD DR L+K+DG
Sbjct: 258 LVDKAMASLREQGFVYE----------------KDGALWLETTALGTGDDKDRVLIKADG 301

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           + TY  +D+AY K K +RGFD +I V+G+DH GY+ RL+A   A+  K  Q+ VL+ ++V
Sbjct: 302 TLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYIARLKASIVAMGYKADQLEVLIMQMV 361

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L  +G  +KMSKR G  ITLR ++DEVG+D+ R+ ++ R     LDFDF   KEQS +N
Sbjct: 362 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 421

Query: 450 PVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           P++YVQYA+AR  SI RQA +         D++L            D   ++L+  LA Y
Sbjct: 422 PLYYVQYAHARICSILRQAAEQENYNLDKCDYELLT----------DEYSVELLKTLAYY 471

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++  A    EP+++  YL +LAS FH  ++  +       V   N + T   L L+ A
Sbjct: 472 PEIVAQAATNYEPHRICNYLQNLASAFHKFYNSNK-------VITENAEQTQSYLALITA 524

Query: 566 VASIINSGLNIIGVESPNEM 585
           V   + + L +IGV +P +M
Sbjct: 525 VKITLRNALELIGVSAPEKM 544


>gi|262277231|ref|ZP_06055024.1| arginyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224334|gb|EEY74793.1| arginyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 567

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/577 (37%), Positives = 337/577 (58%), Gaps = 20/577 (3%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           KN   +I   I ++K I+ +I +E P+    G +S NA +IL+  L   P+ +A  I   
Sbjct: 8   KNLFLKIIKDIPIDKSIIKKITVETPKQKIFGDISFNAPLILASSLKKQPMQLANEIKEL 67

Query: 72  IKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           I+  + D + + +A  GFIN         K +  I      YG+    K  K+NIEFVSA
Sbjct: 68  IQAANNDFEKIEVAKPGFINFTFKKEIFLKFIKII---DKNYGKPTSTKSNKINIEFVSA 124

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGHCR A+ GD L++ + F G+ V +EYYIND G QI     SV++R  +   
Sbjct: 125 NPTGPLHVGHCRGAIFGDVLSNFLKFYGHNVVKEYYINDYGNQIYLFVKSVYFRIIELQK 184

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                  +G YPG Y+  + K++     +E ++  +E  + I+  Y++++ + II+ DL 
Sbjct: 185 GKAFPEDQGLYPGEYIIDIAKDVLKNIKNENISSFDET-ISILTPYAIKSALDIIKKDLD 243

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQL 309
            + I HD F+SE D    D   + + I+ L  +G VY G+LP PK       D + R+QL
Sbjct: 244 LMGIVHDNFVSESDIVNRDI--LSEAIEKLKNKGDVYTGVLPKPKGDAE---DWEPREQL 298

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           LF+S+  GDDVDR L KSD ++TYFA D+AY   K +R FD  I ++G+DH+GYVKRL +
Sbjct: 299 LFKSSKYGDDVDRALQKSDNTWTYFANDVAYHYDKLKRNFDYYINILGADHAGYVKRLSS 358

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              A++  K   ++ L ++V+LY+ G P +MSKRAGDFI  + ++D VG DS RFMM++R
Sbjct: 359 AVNALNNNKT-FSIKLSQIVKLYKSGKPFRMSKRAGDFILAKDLIDAVGKDSARFMMVYR 417

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL-FPRNVIPQE 488
            ++  LDFDF  V + SK+NP+FYVQYA AR  S+F ++       +FD+  P      E
Sbjct: 418 SSNSQLDFDFDLVTDTSKDNPIFYVQYACARINSLFDKS-------NFDIEKPITDAKLE 470

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +    +E  LI  + E+P+++       E + + +YLY+L+S FH +W+ G+EN  L+ +
Sbjct: 471 NLKYETEFNLIKKIVEWPKIVNLCYQNLEVHYIPYYLYELSSEFHTYWNAGKENDDLKII 530

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++++L   RL L+  +  ++  GLNI+ V+   +M
Sbjct: 531 GHSDKELINSRLYLLQKLYLVLTIGLNILDVKVLKKM 567


>gi|241889465|ref|ZP_04776765.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863861|gb|EER68243.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 545

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/560 (38%), Positives = 327/560 (58%), Gaps = 44/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E P++  +G  S+N AM L+R L  +P  IAE I++ I+ D  V+ + IAG GFIN 
Sbjct: 24  IHVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAEEIISNIEEDEAVEKIEIAGPGFINF 83

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  S L  ++  I+    +YG N IG+G KV +E+VSANPTG +HVGH R A   D+LA
Sbjct: 84  FVKKSSLGSVVGKILEDDFKYGENNIGQGRKVLLEYVSANPTGTLHVGHARNAAYSDSLA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  SGY+++REYYINDAG QIN L +S   RY+QAL   D+++PE  Y G  +K +G+
Sbjct: 144 RIMKKSGYDLSREYYINDAGNQINNLVISAITRYKQAL-GMDAEMPEDAYHGEDIKVLGQ 202

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L D++   LL    E     +++Y+V   M+ I+ DL    +++D+F SE   +  +  
Sbjct: 203 KLKDEFGESLL--EREDLNEFIREYAVAYEMENIKKDLGDFGLEYDVFFSEKSLY--ENG 258

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329
            +   +++L  QG+VYE                    L   +T +G  DD DR L+K+DG
Sbjct: 259 LVDKALESLREQGFVYE----------------KDGALWLETTALGTGDDKDRVLIKADG 302

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           S TY  +D+AY K K +RGFD ++ V+G+DH GYV RL+A   A+  K  Q+  L+ ++V
Sbjct: 303 SLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYVARLKASVVAMGYKADQLEALIMQMV 362

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L  +G  +KMSKR G  ITLR ++DEVG+D+ R+ ++ R     LDFDF   KEQS +N
Sbjct: 363 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 422

Query: 450 PVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           P++YVQYA+AR  SI RQA +       + D++L            D   + L+ +LA Y
Sbjct: 423 PLYYVQYAHARICSILRQAAEQAEYDVKNCDYELLT----------DEYSVDLLKNLAYY 472

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++  A    EP+++  YL  LAS FH  +++ +       V   N++ T   L L+ A
Sbjct: 473 PEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK-------VITENKEQTQSYLALITA 525

Query: 566 VASIINSGLNIIGVESPNEM 585
           V   + + L++IGV +P +M
Sbjct: 526 VKITLRNALDLIGVSAPEKM 545


>gi|323699296|ref|ZP_08111208.1| arginyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459228|gb|EGB15093.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 547

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/558 (39%), Positives = 329/558 (58%), Gaps = 36/558 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D+ VIE P+D A G +S N AM+L++     P  +AE I A +  D  ++ + IAG GF+
Sbjct: 24  DKAVIEPPKDSAFGDMSANVAMLLAKDAKKAPRAVAEDIKAALAGDALIEKIDIAGPGFL 83

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N   +P++ R+ +S+I+  G  YG + +G GTKV +E+VSANPTGP+H+GH R A +GD+
Sbjct: 84  NFTFAPAFWRETVSAILDQGEAYGSSTLGNGTKVQVEYVSANPTGPLHIGHGRGAALGDS 143

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++  +GY+V  EYYINDAG Q+  L  S+ +R +Q    N ++ PE YY G Y+  +
Sbjct: 144 LTRILEKAGYDVEAEYYINDAGRQMRILGGSILYRARQLGGLNPAE-PEDYYRGEYITDI 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++       +LL+ PE   +   K+Y +  +++ I+DDL A +++HDI+ SE       
Sbjct: 203 ARDFM-AMRPDLLDLPEADAVEACKEYGMGVILQGIKDDLAAFHVRHDIWFSE------- 254

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
                    +L   G V E       S      D       F+ST++GDD DR L KS+G
Sbjct: 255 --------KSLVNDGKVDETFADLTASGMGYAAD---GAFWFKSTLLGDDKDRVLRKSNG 303

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYFA+D+AY   K++RGFD +I + G+DH GYV R+ A   A+  K   ++V+L  LV
Sbjct: 304 DTTYFASDIAYHDNKFKRGFDLVIDIWGADHHGYVPRMMAACEALG-KPGGLSVILVNLV 362

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG PI MS RAG F TL+ VVDEVGSD+ RFM L RK+   LDFD   VK++S +N
Sbjct: 363 NLLRDGQPIAMSTRAGQFETLKDVVDEVGSDAARFMFLSRKSDSKLDFDLELVKQKSMDN 422

Query: 450 PVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           PV+YVQYA+AR RS+ ++A++  I P     + P ++   ++E+D   L+L+  L +YP 
Sbjct: 423 PVYYVQYAHARIRSLDKKAEEAGIRPAA---VSPASLALLDTEWD---LELLKLLDQYPD 476

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +E A   Q P+ ++ YL +LAS  H ++++         V +    +   RL L+  VA
Sbjct: 477 YVEAAARTQSPHLISMYLQELASTLHRYYTNCH-------VLSAEPDVASARLMLLDCVA 529

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++GV +P  M
Sbjct: 530 GVVANGLGLLGVNAPESM 547


>gi|311032050|ref|ZP_07710140.1| arginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 556

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/588 (37%), Positives = 333/588 (56%), Gaps = 35/588 (5%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +      RLK  +K   +   +  E++I   +V+E P+D  +G  STN AM L+R   
Sbjct: 1   MNIVEQVQERLKEEIKASVLKAGLATEEQI-PAVVLETPKDKTNGDYSTNMAMQLARVAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE IV    +    ++ + IAG GFIN Y+  +YL  ++ +I+ +G +YGR+ I
Sbjct: 60  KAPRMIAEEIVKNFDQSKASIEKIDIAGPGFINFYMDNAYLTDLIPTILKAGTDYGRSNI 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GKG K+N+EFVSANPTG +H+GH R A VGD+L +++  +GYEVTREYYINDAG QIN L
Sbjct: 120 GKGEKINVEFVSANPTGDLHLGHARGAAVGDSLCNVLDKAGYEVTREYYINDAGNQINNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           ALSV  RY QAL   D ++PE  Y G  +  +G+ +AD++    +N  EE      ++Y 
Sbjct: 180 ALSVEARYFQAL-GQDKEMPEDGYHGKDIIGIGQAIADEFGDRFVNESEEDRRSFFREYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++  MK ++ DL+   ++ D++ SE   +  +   I + +  L  QG++YE         
Sbjct: 239 LKYEMKKLQQDLEEFRVRFDVWYSETSLY--NNGKIDEALATLREQGHIYE--------- 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  +     FRST  GDD +R L+K+DGSYTY   D+AY + K +RG D +I + G
Sbjct: 288 -------EEGATWFRSTEFGDDKNRVLIKNDGSYTYLTPDIAYHQDKLKRGHDKLINIWG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+   K  + V + +LV L+++G  +KMSKR G  +T+R +++EV
Sbjct: 341 ADHHGYIPRMKAAIEALGYGKDALEVEIIQLVHLFQNGEKMKMSKRTGKAVTMRDLMEEV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+VR+    R     LDFD      QS ENPVFY QYA+AR  S+ RQ ++    L+ 
Sbjct: 401 GLDAVRYFFAMRSGDTHLDFDMDLAVSQSNENPVFYAQYAHARICSMLRQGEEQGLSLEG 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           + F    I  E E D     L+  L EYP  +  A   + P+++  Y ++LAS  H  ++
Sbjct: 461 N-FALEHISSEKEID-----LLKKLGEYPLAVAEAAEKRIPHRITNYTFELASALHSFYN 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + + A+N + +  RL L+ AV   +   L +IGV +P +M
Sbjct: 515 ------AEKVLDADNMEKSKARLGLMKAVQITLQDALKLIGVSAPEKM 556


>gi|138896975|ref|YP_001127428.1| arginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196249795|ref|ZP_03148491.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166232790|sp|A4ITM9|SYR_GEOTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134268488|gb|ABO68683.1| Arginyl tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210671|gb|EDY05434.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 557

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/587 (37%), Positives = 332/587 (56%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +++   K   V  + L  +++E PR+ AHG  STN AM L+R    
Sbjct: 1   MNIVGQMKEQLKEEIRQAVGKAGLVAAEELPEVLLEVPREKAHGDYSTNIAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV +   +   V  + +AG GFIN Y+   YL  ++ +I+ +G  YG + +G
Sbjct: 61  PPRAIAEAIVEKFDAERVSVARIEVAGPGFINFYMDNRYLTAVVPAILQAGQAYGESNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGD+L++++A +G++VTREYYINDAG QI  LA
Sbjct: 121 KGEKVQVEFVSANPTGNLHLGHARGAAVGDSLSNILAKAGFDVTREYYINDAGKQIYNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   D  LPE  Y G  +  +GK+LAD+Y    ++  EE+ L   ++Y +
Sbjct: 181 KSVEARYFQAL-GTDMPLPEDGYYGDDIVEIGKKLADEYGDRFVHVDEEERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  I++DL A  +  D++ SE   +  +   I + +  L  +GY+YE          
Sbjct: 240 RYELDKIKNDLAAFRVPFDVWYSETSLY--ESGKIDEALSTLRERGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I V G+
Sbjct: 288 ------QDGATWFRSTAFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFTKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A  AA+      + V + ++V LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIAALGYDPEALEVEIIQMVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     LDFD      QS ENPV+YVQYA+AR  SI RQAK+     + D
Sbjct: 402 VDAVRYFFAMRSGDTHLDFDMDLAVAQSNENPVYYVQYAHARVSSILRQAKEHQLSYEGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +   +++  E      E++L+  L ++P V+  A + + P+++  Y +DLAS  H  ++ 
Sbjct: 462 VDLHHLVETE-----KEIELLKALGDFPDVVAEAALKRMPHRVTAYAFDLASALHSFYNA 516

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +  + T  RL LV AV   + + L +IGV +P +M
Sbjct: 517 E------KVLDLDQIEKTKARLALVKAVQITLQNALALIGVSAPEQM 557


>gi|218512655|ref|ZP_03509495.1| arginyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 291

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/294 (62%), Positives = 234/294 (79%), Gaps = 4/294 (1%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R  I++L  +GYVY+G LPPPK +  +  + DR+Q LFRST VGDD+DRPL+KSDGSYTY
Sbjct: 1   RTAINDLTFKGYVYKGTLPPPKGQLPEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTY 59

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           FAAD+AYFK K++RGFD MIYV+G+DH GYVKRLEAVA  VS  KA++ VLLC+LV+LYR
Sbjct: 60  FAADVAYFKNKFDRGFDEMIYVLGADHGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYR 119

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +G P+KMSKR+GDF+TLR VV+EVG DSVRFMML+RKNSE LDFDF KV EQSK+NPVFY
Sbjct: 120 NGEPVKMSKRSGDFVTLRDVVEEVGRDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFY 179

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENA 512
           VQYA+ARC S+FRQA++ FP L  ++   ++    +   D +ELQL+  LAE+PRV+E A
Sbjct: 180 VQYAHARCMSVFRQAREAFPGL--EVSAEDLAKAVAGIGDPAELQLVAKLAEFPRVVEAA 237

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +QEP+++AFYLYDLAS FH HW+ G++   LRFV   NR+ ++ RL LV+AV
Sbjct: 238 AQSQEPHRIAFYLYDLASTFHAHWNKGKDQTELRFVNDKNRESSIARLGLVYAV 291


>gi|295697794|ref|YP_003591032.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295413396|gb|ADG07888.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 557

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/570 (38%), Positives = 320/570 (56%), Gaps = 38/570 (6%)

Query: 20  CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DV 78
           C + VE    DR+ +E PRD  HG  S+NAAM L++ +   P  +A+ +   +      V
Sbjct: 22  CGLSVEA---DRVHLEVPRDKRHGDYSSNAAMQLAKEVRRPPRALAQQLAETLDCRAAGV 78

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           + V +AG GF+N YL   YL  IL  ++     YGR  + +G++V +EFVSANPTG +H+
Sbjct: 79  ERVEVAGPGFLNFYLDTGYLDDILREVLKEKGAYGRRAVPRGSRVQVEFVSANPTGRLHI 138

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A  GD L  ++ + GYEV REYYINDAG Q++ LA+S+  RY QAL   D  +P+
Sbjct: 139 GHARGAAYGDALCRILEWDGYEVQREYYINDAGNQVHNLAISLEARYFQAL-GRDVPMPD 197

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y G  +  + + L  +         EEK    +K   ++AM++ IRDDL    ++ D 
Sbjct: 198 DGYYGRDVVELAERLVREEGDRYAQMSEEKRYEALKQKGLEAMLQQIRDDLTRFRVRFDR 257

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           + SE   +  +   + + ++ L R+G+VYE                    L FRST  GD
Sbjct: 258 WFSERALY--ESGAVEETVEELRRRGWVYEA----------------DGALWFRSTAFGD 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR L+KSDGSYTY   D+AY + K ERGFD +I V G DH GYV R++A  AA+    
Sbjct: 300 DKDRVLIKSDGSYTYLTPDIAYHRDKLERGFDRLIDVWGQDHHGYVGRMKAAVAALGGDP 359

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
            ++ V LC+LV LYR+G P++MSKR G+ +T+  ++DEVG D+ R+ +L R N   +DFD
Sbjct: 360 ERLVVRLCQLVALYRNGEPVRMSKRTGNAVTMAELMDEVGVDAARYFLLRRSNDSHIDFD 419

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRN--VIPQESEFDTSE 495
                 QS +NPV+YVQYA+AR  SI RQA +  +PD+D      N  V+ +E E D   
Sbjct: 420 LDLAVSQSNDNPVYYVQYAHARICSILRQASERGYPDVDQAAESANLRVLRREPEVD--- 476

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  L  +P  +E+A  A  P+ +  YL +LA  FH  ++  R       V     ++
Sbjct: 477 --LLKWLGNFPTEVESAAAAYAPHHIVHYLEELAKRFHSFYTSCR-------VLGEAPEI 527

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + RL LV  V   +  GL+++GV +P +M
Sbjct: 528 EVARLALVRGVQWTLRVGLDLLGVAAPEQM 557


>gi|56421936|ref|YP_149254.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261420805|ref|YP_003254487.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297531600|ref|YP_003672875.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|319768475|ref|YP_004133976.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|81346254|sp|Q5KUF0|SYR_GEOKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56381778|dbj|BAD77686.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261377262|gb|ACX80005.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297254852|gb|ADI28298.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|317113341|gb|ADU95833.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 557

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/555 (38%), Positives = 320/555 (57%), Gaps = 31/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           +++E PRD AHG  STN AM L+R     P  IAE IV ++  +   V  + IAG GFIN
Sbjct: 33  VLLEVPRDKAHGDYSTNIAMQLARIAKKPPRAIAEAIVGQLDRERMSVARIEIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            Y+   YL  ++ +I+ +G  YG + +G G KV +EFVSANPTG +H+GH R A VGD+L
Sbjct: 93  FYMDNRYLTAVVPAILQAGQAYGESNVGNGEKVQVEFVSANPTGDLHLGHARGAAVGDSL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++A +G++VTREYYINDAG QI  LA SV  RY QAL   D  LPE  Y G  +  +G
Sbjct: 153 CNILAKAGFDVTREYYINDAGKQIYNLAKSVEARYFQAL-GVDMPLPEDGYYGDDIVEIG 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA++Y    +   EE+ L   +DY ++  ++ I+ DL    +  D++ SE   +  + 
Sbjct: 212 KKLAEEYGDRFVEMEEEERLAFFRDYGLRYELEKIKKDLADFRVPFDVWYSETSLY--ES 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I + +  L  +GY+YE      +   T           FRST  GDD DR L+K DG+
Sbjct: 270 GKIDEALSTLRERGYIYE------QDGAT----------WFRSTAFGDDKDRVLIKQDGT 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+AY + K  RGF  +I + G+DH GY+ R++A  AA+      + V + ++V 
Sbjct: 314 YTYLLPDIAYHQDKLRRGFKKLINIWGADHHGYIPRMKAAIAALGYDPEALEVEIIQMVN 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY++G  +KMSKR G  +T+R +++EVG D+VR+    R     LDFD      QS ENP
Sbjct: 374 LYQNGERVKMSKRTGKAVTMRELMEEVGVDAVRYFFAMRSGDTHLDFDMDLAVSQSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI RQA++     D DL   +++  E      E++L+  L ++P V+ 
Sbjct: 434 VYYVQYAHARVSSILRQAEEQHISYDGDLALHHLVETE-----KEIELLKVLGDFPDVVA 488

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A + + P+++  Y +DLAS  H  ++        + +  +N + T  RL LV AV   +
Sbjct: 489 EAALKRMPHRVTAYAFDLASALHSFYNAE------KVLDLDNIEKTKARLALVKAVQITL 542

Query: 571 NSGLNIIGVESPNEM 585
            + L +IGV +P +M
Sbjct: 543 QNALALIGVSAPEQM 557


>gi|302392974|ref|YP_003828794.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302205051|gb|ADL13729.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 561

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/556 (38%), Positives = 323/556 (58%), Gaps = 30/556 (5%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D +++E PR+  HG  +TN AM+L+   G+ P  IA++IV  +     V  V IAG GFI
Sbjct: 36  DDVMLEVPREEGHGDYATNIAMVLAGQAGMAPRDIAQVIVDNLAELELVSKVEIAGPGFI 95

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N YL   +L +I+ +++    +YG++  G G KV IEFVSANPTGP+HVGH R AV GD 
Sbjct: 96  NFYLVDEWLYQIIETVLNEKEDYGKSNFGNGKKVQIEFVSANPTGPLHVGHGRGAVAGDV 155

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L ++M+ +G++V +EYYINDAG Q+  L  SV  RYQ+ L   D  +PE  Y G Y++ +
Sbjct: 156 LGNIMSAAGFDVAKEYYINDAGNQMELLGKSVALRYQE-LLGADITMPENSYQGDYIEKI 214

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             ++  +Y  + L   ++      ++++ + ++  I+ DL+A  I+ D + SE   H+ D
Sbjct: 215 AAKIETEYGDKYLTDVQDGNYEFFREFAYEQLLANIKADLQAFGIEFDNWFSERKLHQED 274

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I +++  L   GY+YE                +   L  +ST  GDD DR ++K +G
Sbjct: 275 K--IGEVVAQLKEDGYLYE----------------EEGALWLKSTDFGDDKDRVVIKDNG 316

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY AAD+AY   KY+RGF+ +I V G+DH GY+ R++A   A+      + V++ ++V
Sbjct: 317 VPTYLAADIAYHDNKYQRGFEEVINVWGADHHGYIARMKAAVEALGYSPEMLKVIIVQMV 376

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG  + MSKRAGDFITLR VVDEVG D+ R+  + R     LDFD    KE+S EN
Sbjct: 377 TLLRDGKQVSMSKRAGDFITLRDVVDEVGCDAARYFYVMRSTDSHLDFDLDLAKEESAEN 436

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+Y+QYA+AR  SI  Q K     ++ D+   ++   ++E    EL LI  L +YP  +
Sbjct: 437 PVYYIQYAHARICSILDQIKKEEIKIE-DVSGVDLERLDTEV---ELDLIQKLGDYPEEL 492

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             +  ++EP+ +A Y Y+LA+ FH  ++          V   + ++   RLQLV AV  +
Sbjct: 493 AESAKSREPHHMARYAYELAAQFHSFYNKCH-------VLIQDEEVMQARLQLVLAVKQV 545

Query: 570 INSGLNIIGVESPNEM 585
           +++ LNI+GV +P  M
Sbjct: 546 LSNLLNILGVSAPESM 561


>gi|229542451|ref|ZP_04431511.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326871|gb|EEN92546.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 558

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 334/589 (56%), Gaps = 35/589 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +KE   K   V +  +  IV+E+P++ AHG  + N AM L+R    
Sbjct: 1   MNIAEQMQETLKTEIKEAVMKTGLVAEADIPAIVLEKPKEKAHGDYAANIAMQLARTAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  I K    ++ V IAG GFIN YL  +YL +++ SI+  G +YGR+  G
Sbjct: 61  APRQIAEAIVEHIDKSKTSIEKVEIAGPGFINFYLDNTYLTRLIPSILHDGADYGRSDAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+ +EFVSANPTG +H+GH R A VGD+L +++  +GYEVTREYYINDAG QI+ LA
Sbjct: 121 GGKKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGYEVTREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++P   Y G  +  +GK+LAD+Y  + ++  E+      + Y +
Sbjct: 181 LSVEARYFQAL-GIEKEMPADGYYGQDIIDLGKKLADEYGRKFVDTDEKTRYEFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M  ++ DL+   ++ D++ SE   ++     I +++  +  +G++YE      K   
Sbjct: 240 DYEMAKLKKDLEDFRVRFDVWYSETSLYK--SGKIDEMLKLMREKGHIYE------KDGA 291

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T           FRST  GDD DR L+K+DG+YTY   D+AY K K++RGFD +I + G+
Sbjct: 292 T----------WFRSTAFGDDKDRVLIKNDGTYTYLTPDIAYHKDKFDRGFDTLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+      + V + +LV LY++G  +KMSKR G  +T+R ++DEVG
Sbjct: 342 DHHGYIPRMKAAMEALGYNSDNLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRELIDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLD 476
            D+ R+    R +   LDFD      +S ENPV+Y QYA+AR  SI RQA  K   PD D
Sbjct: 402 LDATRYFFAMRSSDTHLDFDLDLAVSESNENPVYYAQYAHARICSILRQAVEKGFAPDTD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 +VI  E E D     ++  L E+P+VI  A   + P+++  Y+ +LA+ FH  +
Sbjct: 462 AHA-DFSVIRSEKETD-----VLKKLGEFPQVIAEAAEKRIPHRITNYINELAANFHSFY 515

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       ++ +   +   T  RL LV AV   + + L +IGV +P +M
Sbjct: 516 N------AVKVIDPAHADATKARLALVKAVQITLKNALQLIGVSAPEKM 558


>gi|317052384|ref|YP_004113500.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947468|gb|ADU66944.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 556

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/563 (36%), Positives = 321/563 (57%), Gaps = 34/563 (6%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E + L  I+IE P++ + G  +   AM L++ +G  P  IA+ I+A +     ++ V IA
Sbjct: 26  EGQGLPEIIIENPKEKSFGDFACTIAMPLAKIMGQPPRAIAQAIMAHLS-HSAIEKVEIA 84

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+N ++ P+   ++L +I+  G +YGR+ +G+  +V +EFVSANPTGP+H+GH R A
Sbjct: 85  GPGFMNFFVRPAASLEVLKTILREGEQYGRSAVGQNRRVMVEFVSANPTGPLHIGHGRGA 144

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VGD +A ++ ++GY V REYYINDAG Q+N L LS + RY Q L + +  L E  Y G 
Sbjct: 145 AVGDAIARILEYAGYNVHREYYINDAGNQMNNLGLSTYIRYMQLLGHEEMTLEESCYQGD 204

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + +++  KY  +     +   +P     +   +++ I+DDL+   +  D + SE D
Sbjct: 205 YITDIARDVLTKYGRKFEG--DRSSIPFFTTLTGDVILQGIKDDLQRFRVSFDHYFSEKD 262

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            H  +   +   +D L   G  YE                +   L  R+T  GDD DR +
Sbjct: 263 LH--EQGHVSRELDQLQTAGKAYE----------------EGDALWVRTTAFGDDKDRVV 304

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            + +G  TYFAAD+AY + K++RGFD +I + G+DH GYV RL+A    +      + V+
Sbjct: 305 RRGNGETTYFAADIAYHRNKFQRGFDTLIDIWGADHHGYVNRLKAAVNLLDRNPDDLEVI 364

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L +LV L R G+P+ MS R+G+F  LR V+DEVG+D+ R+  L R+    LDFD    K+
Sbjct: 365 LIQLVSLQRAGVPVAMSTRSGEFDALRDVLDEVGTDAARYFFLMRRCDSHLDFDLELAKQ 424

Query: 445 QSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           Q+ +NPVFYVQY +ARC SI  Q  A D +P  + D    +V+  E E D +++     L
Sbjct: 425 QTNDNPVFYVQYCHARCCSIIEQLKANDKYPQQNLDAIDFSVMDTEQEKDLAKV-----L 479

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +  V+E A +A+EP+++  YL ++AS FH  ++        R + A  ++L   R  +
Sbjct: 480 GRFTEVVEGAALAREPHRIPHYLNEVASAFHSFYN------VCRVMNAPTQELLTARTIM 533

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V A   I+ +GL++IG+++P  M
Sbjct: 534 VEATRQIVCNGLHVIGIDAPQRM 556


>gi|251794170|ref|YP_003008901.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247541796|gb|ACS98814.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 559

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/563 (38%), Positives = 320/563 (56%), Gaps = 41/563 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKG 87
           L   V+E P+D AHG L+TNAAM L++    +P  IAE I+A +  +   + S  IAG G
Sbjct: 32  LPAFVLEVPKDKAHGDLATNAAMQLTKLAKKNPRQIAETIIANLNGEKFGIQSAEIAGPG 91

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  +  SYL  ++  I  +G +YGR   G G +V +EFVSANPTG +H+GH R A VG
Sbjct: 92  FINFRMDKSYLYSVVGEITAAGDDYGRTKEGSGQRVEVEFVSANPTGNLHLGHARGAAVG 151

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L +++ F+GYEVTREYYINDAG Q+N LA S+  RY+QAL   D+++PE  Y G  + 
Sbjct: 152 DALCNVLDFAGYEVTREYYINDAGNQVNNLARSIEARYRQAL-GQDAEMPEDGYHGEDIV 210

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
             GK LA++    LL+  +E+     + + ++  +  I+ DL    +  DI+ SE   + 
Sbjct: 211 GFGKLLAEEKGDSLLSLSDEERFAFFRQFGLEKELDKIKRDLGLFRVNFDIWYSETSLY- 269

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-VGDDVDRPLLK 326
            +   +   ++ L  +G VYE                  +   + STM  GDD +R L+K
Sbjct: 270 -ESGQVETALEALKAKGQVYE-----------------EEGATWLSTMPYGDDKNRVLVK 311

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           +DGSYTY   D+AY + K+ RG+D MI + G+DH GY+ R++A  AA+     ++ VL+ 
Sbjct: 312 NDGSYTYLTPDIAYHQDKFSRGYDKMINIWGADHHGYIPRVKAAMAALGNDPDKLVVLIA 371

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++V L++DG  +KMSKR G  +T++ ++DEVG D++R+    R     LDFD       S
Sbjct: 372 QMVSLFQDGEKVKMSKRTGKAVTMQDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAISTS 431

Query: 447 KENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            ENPVFYVQYA+AR  SIFRQA++    I P  D D      +  E+EFD     L+  L
Sbjct: 432 NENPVFYVQYAHARICSIFRQAEEQSVAILPIGDIDF---GKLSSEAEFD-----LLRKL 483

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            E P+ +  A     P++L  Y+Y+LAS FH ++   R       V   +   T  R+ L
Sbjct: 484 GELPQEVSEAAAQYAPHRLIRYVYELASQFHSYYKAER-------VITEDAAQTQARIAL 536

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + AV  +I + L ++GV +P  M
Sbjct: 537 LGAVRIVIANTLRLVGVSAPERM 559


>gi|317130799|ref|YP_004097081.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315475747|gb|ADU32350.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 555

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/556 (37%), Positives = 321/556 (57%), Gaps = 35/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           +VIE P++  HG  +TN AM L+R     P  IA+ IVA   K    V+ + IAG GFIN
Sbjct: 33  VVIESPKEKEHGDYATNMAMQLARIAKKAPRMIADDIVANFNKEAASVEKIEIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++   YL +I+S+++  G  +G+  +G+G ++ +EFVSANPTG +H+GH R A VGD+L
Sbjct: 93  FFMKKDYLSEIVSTVLKQGNAFGKVNVGEGKRLQVEFVSANPTGTLHLGHARGAAVGDSL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY+V REYYINDAG QI  LA S+  RY QAL   D  +PE  Y G  +    
Sbjct: 153 CNILEKAGYDVAREYYINDAGNQIENLARSIDARYLQAL-GKDVPMPEDGYHGQDIIGFA 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE+AD Y    ++  E++ L   ++Y ++  +  +++DL    +  D + SE   +  + 
Sbjct: 212 KEIADTYGDRFIDAEEKERLAFFREYGLKRELDKLKEDLADFRVNFDHWYSETSLYTTEK 271

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + D++  L  +G  YE                +   + FRST  GDD DR L+KSDGS
Sbjct: 272 --VTDVLTELKNRGETYE----------------EDGAVWFRSTTYGDDKDRVLVKSDGS 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D++Y K K+ RGF+ +I + G+DH GY+ R++A   A+  +K Q++V + ++V 
Sbjct: 314 YTYLTPDISYHKDKFARGFEELINIWGADHHGYIPRMKAAIQALGYEKEQLSVQIIQMVN 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L+ +G  +KMSKR G  +T+R +++EVG D+ R+    R     LDFD    K QS ENP
Sbjct: 374 LFENGEKVKMSKRTGKAVTMRDLMEEVGIDATRYFFAMRAADTHLDFDMSLAKSQSTENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+YVQYA+AR  S+ RQA+D+  ++D    F R  +  E E D     L+  L EYP  +
Sbjct: 434 VYYVQYAHARICSMLRQARDLGYEVDPHAQFER--LTAEKELD-----LMKKLGEYPEAV 486

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A   + P+++A Y+YDLA   H  ++  +       V   + +LT  RL L+ AV + 
Sbjct: 487 ADAAKKRAPHRMANYVYDLAQTLHSFYNAEK-------VINEDSELTKARLGLMEAVRAT 539

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 540 LQDALKLVGVEAPEKM 555


>gi|242281146|ref|YP_002993275.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511640|sp|C6BU27|SYR_DESAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|242124040|gb|ACS81736.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 547

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/559 (37%), Positives = 330/559 (59%), Gaps = 38/559 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           ++ VIE P+D   G +S N AM+LS+   ++P  IAE I + +  D  ++ V IAG GF+
Sbjct: 24  EKAVIEPPKDKKFGDMSANIAMMLSKQAKMNPRAIAETIQSELDGDKYIEKVDIAGPGFL 83

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N   S S+ + ++  ++  G +YGR+ IGK TK+ +E+VSANPTGP+H+GH R A +GD 
Sbjct: 84  NFTFSNSFWQDLIPEVLTKGEDYGRSEIGKDTKIQVEYVSANPTGPLHIGHGRGAALGDC 143

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++ F+GY+V  EYY+NDAG Q+  L  S++ R QQ+   + +D PE +Y G Y+K +
Sbjct: 144 LVRILEFTGYDVEAEYYVNDAGRQMLILGTSIWVRLQQSQGRDIAD-PEDFYKGEYIKDL 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E+ ++ +  +L+  +++ + I ++Y    +++ I+ DL A +++HD++ SE      +
Sbjct: 203 AAEVLER-NPGILDMSDDEAIAICREYGKDEILEGIKKDLAAFDVRHDVWFSEKSLVTAN 261

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + +   +L  +G  YE                +   L F+ST +GDD DR L KS+G
Sbjct: 262 --KVEETFADLKARGMAYE----------------EDGALWFKSTELGDDKDRVLRKSNG 303

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYFA+D+AY   KY+RGFD ++ + G+DH GY+ R++A   A+  KK Q++V+L +LV
Sbjct: 304 DLTYFASDIAYHDDKYKRGFDIVVDIWGADHHGYIPRMQAAVEALG-KKGQLDVILVQLV 362

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R G  I MS RAG F TL  VV+EVG D+ RFM L RK+   LDFD   VK+++ +N
Sbjct: 363 NLLRGGEQIAMSTRAGKFETLEDVVNEVGRDASRFMFLSRKSDSHLDFDLELVKQKTMDN 422

Query: 450 PVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           PV+YVQYA+AR  S+ R+A D     P +D         P  +  +  EL L+  + ++ 
Sbjct: 423 PVYYVQYAHARICSVMRKAADQGIAVPAID-------AAPLSALTNAEELNLMKLMDQFA 475

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V ENA     P+ +++YL DLAS  H  +S       +  + + +  +   RL L+ AV
Sbjct: 476 DVAENAGKNMSPHVISYYLRDLASALHRFYS-------MHHILSADEDVIAARLVLLQAV 528

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  + +GL+++GV +P  M
Sbjct: 529 ARTLANGLSLLGVSAPESM 547


>gi|303248045|ref|ZP_07334311.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490602|gb|EFL50507.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 552

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/559 (38%), Positives = 329/559 (58%), Gaps = 35/559 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFI 89
           +  IE PRD +HG L+TN AM+ ++   + P  +A EL    +   PD+  V +AG GFI
Sbjct: 25  KTTIEAPRDKSHGDLATNVAMMATKAAKMPPRQLAGELREELLAASPDLADVAVAGPGFI 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+  +P + ++ +  +  SG  YGR  IG+GT++ +EFVSANPTGP+H+GH R A VGD+
Sbjct: 85  NVTFTPGFWQRTVLDVAGSGDRYGRLNIGEGTRIQVEFVSANPTGPLHIGHGRGAAVGDS 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G+ V  EYYINDAG Q+  L  S+ +R ++ L   D   PE YY G Y+K +
Sbjct: 145 LARVLRAAGFAVETEYYINDAGRQMRILGQSILYRCRE-LAGKDVTEPEDYYRGDYVKEL 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +EL D+    LL+ PE+K   I + Y  + ++  I+ DL+   + HD++  E       
Sbjct: 204 ARELLDREGEGLLDLPEDKATDICRLYGEKEILDGIKKDLREFRVGHDVWFPESKLFAA- 262

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +    D+L  +   Y               D D   L F +T  GDD DR L+KS G
Sbjct: 263 -GAVARTFDDLRAKNLAY---------------DKD-GALWFATTNFGDDKDRVLVKSGG 305

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCEL 388
             TYFA+D+AY   K+ RGFD ++ + G+DH GYV R++A  AA+  + +  + V+L +L
Sbjct: 306 DLTYFASDIAYHDDKFRRGFDVVVDIWGADHHGYVPRMKACVAALGRDPETSLKVILVQL 365

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L + G  I MS RAG F TL  VV EVG+D+ RFM L RK+   LDFD   VKE+S +
Sbjct: 366 VNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMFLSRKSDSHLDFDLDAVKEKSMD 425

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-ESEFDT-SELQLIVHLAEYP 506
           NPV+YVQYA+AR +S+F +A       +  + PR   P+  S+ DT  +L+L+  L +YP
Sbjct: 426 NPVYYVQYAHARVKSLFAKAA------ERGVTPREATPELLSKLDTPEDLELLKLLEQYP 479

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             + +A     P+ ++FYL DLA   H +++    NP L    + + +LT+ RL L+ AV
Sbjct: 480 DTVASAARTFAPHLVSFYLRDLAGQLHRYYT---VNPVL---ASGDAELTVARLALLDAV 533

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+++ +GL+++GV +P++M
Sbjct: 534 ATVVRNGLDLLGVSAPDKM 552


>gi|16080786|ref|NP_391614.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221311696|ref|ZP_03593543.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316022|ref|ZP_03597827.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320933|ref|ZP_03602227.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325218|ref|ZP_03606512.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|2851477|sp|P46906|SYR_BACSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2224756|emb|CAB09703.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2636270|emb|CAB15761.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291486320|dbj|BAI87395.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 556

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/589 (37%), Positives = 333/589 (56%), Gaps = 43/589 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE + K  V      E+  +  +V+E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQMKDVLKE-EIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK LA++Y    +N  E + L   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   ++     I   ++ L  +G+VYE          
Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++  + P  D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + I  E E+D     L+  +  +P  +  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 514 N------AEKVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|319650937|ref|ZP_08005072.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317397293|gb|EFV77996.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 555

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/588 (35%), Positives = 334/588 (56%), Gaps = 36/588 (6%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +      +LK  +K+  +   +  E++I D +++E P++ AHG  STN AM L+R   
Sbjct: 1   MNIVEQVQDKLKQEIKDAVVKAGLAAEEQIPD-VILEIPKEKAHGDYSTNMAMQLARVAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE ++A        ++ + IAG GFIN Y++ SYL  ++ +++ +G +YG   +
Sbjct: 60  KAPRMIAEELIAHFDSSKASIEKIEIAGPGFINFYMNNSYLTDLIPAVLEAGDQYGETTV 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G   K+ +EFVSANPTG +H+GH R A VGD+L +++  +GYEV+REYYINDAG QIN L
Sbjct: 120 GNSQKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGYEVSREYYINDAGNQINNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           ALSV  RY QAL   + ++P   Y G  +  +GK+LAD+Y  + ++  E++     ++Y 
Sbjct: 180 ALSVEARYFQAL-GLEKEMPADGYHGEDIIGIGKKLADEYGDKYVHADEKERFDFFREYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++  M  ++ DL+   +  D++ SE   +  +   I   +  L   G++YE         
Sbjct: 239 LKYEMAKLKQDLEDFRVPFDVWYSETSLY--NNGKIDTALQALKDNGHIYE--------- 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  +     FRST  GDD DR L+K+DGSYTY   D+AY K K ERGF+ +I + G
Sbjct: 288 -------EEGATWFRSTAFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINIWG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+   +  + V + +LV LY++G  +KMSKR G  +T+R +V+EV
Sbjct: 341 ADHHGYIPRMKAAIQALGYDREALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVEEV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+    R     LDFD      QS ENPV+Y QYA+AR  SI RQ ++    +  
Sbjct: 401 GLDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARISSILRQGEE--QGMSA 458

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +    ++I  E E D     ++  + E+P+ +  A   + P+++  Y+Y+LAS FH  ++
Sbjct: 459 EAADYSLIQAEKEID-----VLKKIGEFPQAVGEAAQKRMPHRITNYIYELASSFHSFYN 513

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + + A N + T  RL L+ AV + + + L +IGV +P +M
Sbjct: 514 ------AEKVLDAENPERTKARLALIKAVQTTLKNALKLIGVSAPEKM 555


>gi|321313283|ref|YP_004205570.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019557|gb|ADV94543.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 556

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/589 (37%), Positives = 332/589 (56%), Gaps = 43/589 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE + K  V      E+  +  +V+E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQMKDVLKE-EIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK LA++Y    +N  E + L   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R DL+   +  D++ SE   ++     I   ++ L  +G+VYE          
Sbjct: 240 KYELDKLRKDLENFRVPFDVWYSETSLYQN--GKIDTALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++  + P  D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + I  E E+D     L+  +  +P  +  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 514 N------AEKVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|312879774|ref|ZP_07739574.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783065|gb|EFQ23463.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 558

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/558 (37%), Positives = 317/558 (56%), Gaps = 34/558 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+++ERPR    G  + NAAM L++   L P  +A  +  R+  D  +    +AG GF+N
Sbjct: 32  RVLLERPRRSGQGDWACNAAMQLAKTFSLSPRDLATQLAERLGKDDLLAGAEVAGPGFLN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L LSP ++++++  I+    +YGR  +G+G KV +EFVSANPTGP+H+GH R A VGD  
Sbjct: 92  LTLSPVWVKELVGRILDQKEDYGRVDVGRGRKVQVEFVSANPTGPLHMGHGRGAAVGDIA 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHV 209
           AS++AF+G++V REYYINDAG Q+  L  S   RY + L   D + LPE  Y G Y+  +
Sbjct: 152 ASVLAFAGWKVEREYYINDAGLQMELLGRSARSRYFELLGRGDEAPLPEDGYHGEYMTDL 211

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +++ ++      + PEE+ LP   D + + ++  IR DL+A  +  D++ SE   ++ D
Sbjct: 212 ARQILEEEGPGWADLPEEEALPRFSDATAKRVLDWIRRDLEAFGVVFDVWFSEKSLYQDD 271

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              ++  I+ L  +GY Y               D D   + FRST  GDD DR +++S+G
Sbjct: 272 Q--VQRAIEALKGRGYAY---------------DAD-GAVWFRSTAFGDDKDRVMIRSNG 313

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           + TYF +D+ Y K KY+RGFD ++ V G+DH GY+ R+++  +A+      + V+L +LV
Sbjct: 314 APTYFTSDVVYHKNKYDRGFDLVVNVWGADHHGYIPRMKSAVSAMGRDPEDLQVMLIQLV 373

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R G P+ MSKRAG FITL+ V+DEVG D+ RF  + R+    LDFD    K+ S +N
Sbjct: 374 NLLRGGEPVSMSKRAGTFITLQDVMDEVGVDATRFFFVMRRCDSHLDFDLELAKKSSSDN 433

Query: 450 PVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           PVFYVQYA+AR  SI R  +A+ +      DL P  +   E      EL L   LA +P 
Sbjct: 434 PVFYVQYAHARICSILRETEARGLPSPTPEDLDPNLLSTPE------ELALATVLARFPE 487

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I  A    EP+++A+Y  +LA  FHG ++  R       +      L   R+ L+ A  
Sbjct: 488 EIRKAAEGLEPHRVAYYAQELAEAFHGFYNAAR-------ILGVEEPLRKARMLLLEATR 540

Query: 568 SIINSGLNIIGVESPNEM 585
             + + L ++GV +P  M
Sbjct: 541 ITLVNALRLLGVRAPERM 558


>gi|288554437|ref|YP_003426372.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545597|gb|ADC49480.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 556

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/559 (36%), Positives = 319/559 (57%), Gaps = 32/559 (5%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGK 86
           +L  +V+E P+D AHG  +TN AM L+R     P  IAE + +++ K    +  + IAG 
Sbjct: 29  VLPEVVLEAPKDKAHGDYATNMAMQLARIAKKAPRQIAEELTSQLDKEKASIQKIDIAGP 88

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN +++ SYLR+I+ +++ +   YG   +G G K+ +EFVSANPTG +H+GH R A V
Sbjct: 89  GFINFFMNKSYLREIVPAVLSAKEAYGETNVGNGEKIQVEFVSANPTGSLHLGHARGAAV 148

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD L ++++ +GY+V REYYINDAG QIN LALS+  RY QAL   D ++PE  Y G  +
Sbjct: 149 GDALCNVLSKAGYDVEREYYINDAGNQINNLALSLEARYFQAL-GQDKEMPEEGYRGQDI 207

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
              GK LA+++  + +N  E +     + Y +Q  +  I+ DLK   ++ D + SE   +
Sbjct: 208 VDFGKALAEEHGDKYVNVSESERREFFRQYGLQKELDKIKSDLKEFRVEFDNWFSETSLY 267

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             + + + ++++ L  +G  YE                      FRST  GDD DR L+K
Sbjct: 268 --ESNKVIEVLETLDEKGETYE----------------QDGATWFRSTTYGDDKDRVLIK 309

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           +DG+YTY   D+AY + K +RGFD +I + G+DH GY+ R+ A   A+     Q  V + 
Sbjct: 310 NDGTYTYLTPDIAYHQDKMQRGFDKLINIWGADHHGYIPRMRAAIQALGYSPEQFEVQII 369

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++V LY+ G  +KMSKR G  +TLR ++DEVG D+VR+    R     LDFD      +S
Sbjct: 370 QMVSLYQGGEKVKMSKRTGKAVTLRDLMDEVGIDAVRYFFAMRSADSQLDFDMDLAVSKS 429

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            ENPVFYVQYA+AR  S+ RQ +++  D D +    + +  E E+D     L+  + ++P
Sbjct: 430 NENPVFYVQYAHARVCSMLRQGEELGLDYDENT-DLSAVSTEKEYD-----LLKAIGDFP 483

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            ++  A   + P+++  Y +DLAS  H  ++        R + + ++  +  RL L+ A 
Sbjct: 484 AIVAEAAEKKMPHRITNYAHDLASALHSFYNAE------RVIDSEDQDKSKARLALMKAT 537

Query: 567 ASIINSGLNIIGVESPNEM 585
              I + L+++GV +P +M
Sbjct: 538 QITIQNALSLVGVSAPEKM 556


>gi|52082258|ref|YP_081049.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52787649|ref|YP_093478.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319648132|ref|ZP_08002349.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81384315|sp|Q65DS9|SYR_BACLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52005469|gb|AAU25411.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52350151|gb|AAU42785.1| ArgS [Bacillus licheniformis ATCC 14580]
 gi|317389767|gb|EFV70577.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 556

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/579 (37%), Positives = 329/579 (56%), Gaps = 37/579 (6%)

Query: 11  LKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           LK  +KE   K  + E+  +  +V+E P+D +HG  STN AM L+R     P  IAE IV
Sbjct: 11  LKQEIKEAVMKAGLAEESEIPEVVLEVPKDKSHGDYSTNMAMQLARIAKKAPRNIAEEIV 70

Query: 70  ARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           A   K    +D + IAG GFIN Y++  YL K++ +++ +G  YG   IG G +V +EFV
Sbjct: 71  ASFDKGKASIDKLDIAGPGFINFYMNNQYLTKLIPAVLEAGEAYGETNIGGGERVQVEFV 130

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +H+GH R A VGD+L +++  +GYEV+REYYINDAG QIN LALSV  RY QA
Sbjct: 131 SANPTGNLHLGHARGAAVGDSLCNVLEKAGYEVSREYYINDAGNQINNLALSVEARYFQA 190

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   D  +PE  Y G  +K +G++LAD++    ++  E + L   ++Y ++  +  +R+D
Sbjct: 191 L-GKDKPMPEDGYHGEDIKEIGQKLADEFGDRFVHEEESERLAFFREYGLKYELGKLRED 249

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L+   +  D++ SE   ++     I   ++ L  +G++YE                +   
Sbjct: 250 LENFRVPFDVWYSETSLYQN--GKIDQALEALREKGHIYE----------------EDGA 291

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
             FRST  GDD DR L+K DGSYTY   D+AY K K +RGF  +I V G+DH GY+ R++
Sbjct: 292 TWFRSTAFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFQKLINVWGADHHGYIPRMK 351

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+   K  + V + +LV LY++G  +KMSKR G  +T+R ++DEVG D+VR+    
Sbjct: 352 AAIEALGYDKETLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIDEVGLDAVRYFFAM 411

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIP 486
           R     +DFD       S ENPV+Y QYA+AR  S+ RQ   K I  + + DL     I 
Sbjct: 412 RSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEKGISFEGNLDL---TKIG 468

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E E+D     L+  +  +P  + +A   + P+++  Y+++LASV H  ++        +
Sbjct: 469 SEKEYD-----LLKVIGSFPEAVADAAEKRIPHRITNYIFELASVLHSFYN------AEK 517

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   + + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 518 VLDPADEEKSRARLSLMKATQITLNNALKLIGVSAPEKM 556


>gi|302344279|ref|YP_003808808.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640892|gb|ADK86214.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 554

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/560 (36%), Positives = 317/560 (56%), Gaps = 43/560 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINL 91
            +E+P+   HG L+ N AM+L++P  ++P  +A++I+ R+      ++   IAG GFINL
Sbjct: 31  AVEKPKQAEHGDLALNLAMVLAKPCRMNPRAVAQIIIERMADAGGLIERAEIAGPGFINL 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  P     +   ++  G ++GR  +G G +  +EFVSANPTGP+HVGH R A +GD +A
Sbjct: 91  FCRPLAWLSVAPEVLAQGDDFGRCALGAGRRAQVEFVSANPTGPLHVGHGRGAALGDVMA 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+AF+G+EV  EYYINDAG Q+ TL  SV  R +QA   +D   P+ +Y G Y+  + +
Sbjct: 151 RLLAFAGWEVATEYYINDAGNQMATLGRSVLIRARQA-RGSDEPFPDKHYRGDYIVDLAE 209

Query: 212 EL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD 269
           EL A    + LL  P+++ + +  D++   ++  I+DDL    +    + SE   F  G 
Sbjct: 210 ELLASPEGAGLLAMPQDQAVDLATDWAGGKILAGIKDDLAVFGVNIATYFSERSLFADGK 269

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              ++  +D LA +G +YE                    L FRS+  GDD DR + +S+G
Sbjct: 270 ---VQAALDELAARGLLYEA----------------DGALWFRSSQFGDDKDRVVRRSNG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYFA+D+AY   K++RGFD ++ + G+DH GYV RL A   A   +   + V+L ++V
Sbjct: 311 ELTYFASDIAYHLDKFKRGFDAVVDIWGADHHGYVPRLRAAVRAAGRQPEDLTVVLVQMV 370

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R G P+ MS RAG+F+TLR VVDEVG+DS RF+ L R++   LDFD    K++S +N
Sbjct: 371 NLLRGGNPVAMSTRAGEFVTLREVVDEVGADSARFIFLTRRSDAPLDFDLDVAKQKSMDN 430

Query: 450 PVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           PVFYVQYA+ R  S+ R+A    +   P    DL              +E+ L   + ++
Sbjct: 431 PVFYVQYAHTRVCSVLRKALEAGQGQAPPQGLDL---------GRLGPAEVDLAKIIGQF 481

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++  A    EP+++A+YL +LAS FH +++          +  ++  L+  RL L  A
Sbjct: 482 PEMVRGAAETLEPHRVAYYLRELASAFHSYYNE-------THILVDDAALSAARLCLARA 534

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  ++ +GL ++GV +P  M
Sbjct: 535 VGQVLRNGLALLGVSAPEAM 554


>gi|218782325|ref|YP_002433643.1| arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226701483|sp|B8FCL2|SYR_DESAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218763709|gb|ACL06175.1| Arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 556

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/554 (40%), Positives = 325/554 (58%), Gaps = 31/554 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINL 91
           +E P+  AHG  STN AM++++   + P  IAE IV  ++ DP+  +    IAG GFIN 
Sbjct: 32  LEEPKQEAHGDFSTNIAMVMAKVQKMAPRKIAEAIVDNLE-DPENFLVKTEIAGPGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YL PS  ++++  I+  G EYGR+ IG G KV +EFVSANPTGP+HVGH R A VGD LA
Sbjct: 91  YLRPSLWQRVVKGILDKGDEYGRSQIGAGQKVQVEFVSANPTGPLHVGHGRGAAVGDALA 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+   G+EV REYYIND+G QI TL LS + RY + L   + D P+  Y G Y+K + K
Sbjct: 151 ALLDMCGFEVEREYYINDSGRQIRTLGLSTWLRYCE-LKGKEIDFPKDCYQGDYIKDLAK 209

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + D+  ++L +  EE  +     ++   ++  I+ DLK   + HD++ SE   +  D +
Sbjct: 210 RIQDENLADLDSMEEEDAVLWCARFAANDILDGIKQDLKDFRVVHDVWFSEQSLY--DDN 267

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +++ +++  + G +YE        K   K         F++   GD+ DR +++++G  
Sbjct: 268 SVQNALEHFEKTGDIYE--------KDGAK--------WFKTEDRGDEKDRVVVRNNGLT 311

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA+D+AY K K++RGFD +I V G+DH GYV R++A   AV   K    V+L +LV L
Sbjct: 312 TYFASDIAYHKNKFDRGFDRVIDVWGADHHGYVARMKAAVDAVGRDKDAFEVVLVKLVNL 371

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG P+ M+ R G F TL  VV+EVG+D+ RF+ L R     LDFD    K+Q+ ENPV
Sbjct: 372 LRDGEPLAMTTRGGTFETLADVVNEVGADAARFIFLSRHYESPLDFDLELAKKQTNENPV 431

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQY +AR  SI  +AKD    LDFD + R+    +      E++L+  LA YP V+E 
Sbjct: 432 WYVQYVHARICSIEAKAKDFPVSLDFD-WDRDEEILKE---IEEIRLMKALARYPEVVEG 487

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP+++ FYL +LAS FH  +     +  +   +     LT  RL LV  V  +I 
Sbjct: 488 AARTLEPHRIVFYLRELASAFHSFY-----HDHMVLKEDQTPVLTKARLDLVTTVRQVIR 542

Query: 572 SGLNIIGVESPNEM 585
           +GL ++GV +P  M
Sbjct: 543 NGLALLGVSAPESM 556


>gi|284048956|ref|YP_003399295.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953177|gb|ADB47980.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 552

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/558 (38%), Positives = 313/558 (56%), Gaps = 41/558 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V+  P   A G  +TN A+  +R     P  IA  +   +   P VD V IAG GF+N 
Sbjct: 32  VVLTVPPQKAFGDFATNFALQAARNFHCAPRVIAAAVQEYLDC-PSVDKVEIAGPGFLNF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YL   +L + L +I+  G  YG      G K+ IE+VSANPTGP+HVGH R A VG  LA
Sbjct: 91  YLKEDWLGESLRAILDKGENYGNLPPKNGEKIQIEYVSANPTGPLHVGHGRGAAVGSALA 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           SLM  +GY+VTREYYINDAG Q++ LALSV  RY + L++     PE  Y G  +K   +
Sbjct: 151 SLMKAAGYDVTREYYINDAGNQMHNLALSVNARYLE-LFDIPCQFPENGYHGEDIKVTAR 209

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  KY  + ++ PEE+ L   +  + +  +  +++DL+A N + D++ SE   H  D  
Sbjct: 210 RIKAKYGDKFIHMPEEERLEQFQTLAKEEKLAALKEDLEAFNCEFDVWFSEQSLH--DAD 267

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I  ++D L  +GYVYE        K   K         FRST  GDD DR +++ +G  
Sbjct: 268 KIHQVVDELQEKGYVYE--------KDGAK--------WFRSTAFGDDKDRVVIRDNGVS 311

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFAAD+AY + K++RGFD +I + G+DH GY+ R++A   A+    +++ VL+ ++V L
Sbjct: 312 TYFAADIAYHQNKFQRGFDRVINLWGADHHGYIPRVKAAMEALGYDPSRLEVLILQMVAL 371

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           YR+G  +KMSKR G  +TL  +++EVG+D+ RF  + R     LDFD     E S +NPV
Sbjct: 372 YRNGELVKMSKRTGKSVTLNELIEEVGTDAARFFFIMRSMDSQLDFDLTLATEHSNDNPV 431

Query: 452 FYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +YVQYA+AR  SI RQ ++    +  D D  +    +          E+ LI  L +Y  
Sbjct: 432 YYVQYAHARICSILRQMEEEKIALRKDCDLSVLKEPI----------EVDLIKKLNDYEE 481

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           +IE A   + P+K+A Y+YDLA +FH  ++  R       V   +  +   RL L+ AV 
Sbjct: 482 LIETAAAERAPHKIAHYVYDLAGLFHSFYNQCR-------VLGVDPAVQQARLALITAVG 534

Query: 568 SIINSGLNIIGVESPNEM 585
           + +  GL I+GV +P+ M
Sbjct: 535 NTLRHGLKILGVSAPDHM 552


>gi|296331374|ref|ZP_06873846.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676361|ref|YP_003868033.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151489|gb|EFG92366.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414605|gb|ADM39724.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 556

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/589 (36%), Positives = 334/589 (56%), Gaps = 43/589 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE + K  V      E+  +  +V+E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQMKDVLKE-EIKSAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +V+   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEELVSHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK +A++Y    +N  E + L   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRIAEEYGDRFVNEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   ++     I   ++ +  +G+VYE          
Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEAIREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++  + P +D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAVD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + I  E E+D     L+  +  +P  +  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGSFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 514 N------AEKVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|15606252|ref|NP_213630.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226192|sp|O67068|SYR_AQUAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2983452|gb|AAC07033.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 583

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/588 (36%), Positives = 332/588 (56%), Gaps = 66/588 (11%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E+P++ AHG L++N A +L+R L   P+ IA+ +   +  D    SV  A KGFIN   
Sbjct: 26  VEKPKEEAHGDLASNVAFLLARELKKPPVNIAQELADFLSKDETFKSV-EAVKGFINFRF 84

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S  +L++     ++SG  Y +  +GKG KV +E+VSANPTGP+H+GH R AVVGDTLA L
Sbjct: 85  SEDFLKEEFKKFLLSGEAYFKEDLGKGLKVQLEYVSANPTGPLHLGHGRGAVVGDTLARL 144

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD--------LPEGYYPGVY 205
             F  Y+VTREYYINDAG Q+  L +S+++RY +     D +          +  Y G Y
Sbjct: 145 FKFFNYDVTREYYINDAGRQVYLLGISIYYRYLEKCPERDEETFKEIKEIFEKDGYRGEY 204

Query: 206 LKHVGKELADKYSSELLNFPEE----------------------KWLP-----IVKDYSV 238
           +K + + L  K   E L  PEE                      K+ P     ++ +Y +
Sbjct: 205 VKEIAERLR-KLVGESLCKPEEANLKEVREKILKEESIELYYTKKYEPKDVVDLLSNYGL 263

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             MMK IR+DL  ++I  D++ SE   +  D   +  +I+ L  +GYVYE          
Sbjct: 264 DLMMKEIREDLSLMDISFDVWFSERSLY--DSGEVERLINLLKEKGYVYE---------- 311

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  ++++ GDD DR + +SDG+YTYFA+D+AY   K++RGF+ +I V G+
Sbjct: 312 ------KDGALWLKTSLFGDDKDRVVKRSDGTYTYFASDIAYHYNKFKRGFEKVINVWGA 365

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A    +   +  + +LL ++V+L+R+G  +KMSKRAG F+TLR ++DEVG
Sbjct: 366 DHHGYIPRVKAALKMLEIPEDWLEILLVQMVKLFREGKEVKMSKRAGTFVTLRELLDEVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDF 477
            D+VRF+ L +++   LDFD  K KE+S ENPV+YVQYA+AR   IFR+ K+ +  D+  
Sbjct: 426 KDAVRFIFLTKRSDTPLDFDVEKAKEKSSENPVYYVQYAHARISGIFREFKERYKKDVSV 485

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +     V   E E   +E++LI  +  +   + + T+ +EP+ L +YL DLA  FH +++
Sbjct: 486 EELINYVQHLEEE---AEIKLIKKVLFFKDELVDITLKREPHLLTYYLIDLAGDFHHYYN 542

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +      +   RL LV  +  ++  GLN++GV +P  M
Sbjct: 543 HHR-------ILGMEENVMFSRLALVKGIKEVVRLGLNLMGVSAPERM 583


>gi|308175459|ref|YP_003922164.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307608323|emb|CBI44694.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328555439|gb|AEB25931.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328913809|gb|AEB65405.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 556

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/589 (36%), Positives = 332/589 (56%), Gaps = 43/589 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE + K  V      E+  +  +++E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQMKDVLKE-EIKAAVLKAGLAEESQIPSVLLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   +G
Sbjct: 61  APRQIAEEIVAAFDKGKASIEKMDIAGPGFINFYMNNGYLTKLIPSVLEAGEHYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDVLCSVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK+LA+ +    ++  E +     ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R DL+   +  D++ SE   +  +   I   ++ L  +G+VYE          
Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DGSYTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  KK  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++  + P  D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + I  E E+D     L+  +  +P  +  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRITNYIYDLASALHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N++ +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 514 N------AEKVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|154687847|ref|YP_001423008.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166232756|sp|A7Z9V1|SYR_BACA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|154353698|gb|ABS75777.1| ArgS [Bacillus amyloliquefaciens FZB42]
          Length = 556

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/589 (37%), Positives = 332/589 (56%), Gaps = 43/589 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE + K  V K  L        +++E P++  HG  STN AM L+R    
Sbjct: 2   NIAEQMKDVLKE-EIKAAVLKAGLADESQIPSVLLETPKEKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++ SYL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEEIVASFDKGKASIEKMDIAGPGFINFYMNNSYLTKLIPSVLEAGEHYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDALCSVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK+LA+ +    ++  E +     ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R DL+   +  D++ SE   +  +   I   ++ L  +G+VYE          
Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DGSYTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  KK  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++  + P  D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + I  E E+D     L+  +  +P  +  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N++ +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 514 N------AEKVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|288572901|ref|ZP_06391258.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568642|gb|EFC90199.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 558

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/596 (36%), Positives = 328/596 (55%), Gaps = 54/596 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           AD ++ L++ + E    +  +K++    L  + +ERP+    G  +TN AM   + LG  
Sbjct: 2   ADVTTILRDLIGEALSDMARQKEVSSDLLPEVHLERPKREDQGDWATNVAMQACKLLGEK 61

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A ++V R+K D  + SV +AG GFIN +L+  ++  ++SS++ SG +YGR  +GKG
Sbjct: 62  PRDLAAMVVDRLKDDEHIRSVEVAGPGFINFFLADRWIGNVISSVLSSGDDYGRCDLGKG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+HVGH R A VGD + +++ FSG++V +EYY+NDAG Q++ L  S
Sbjct: 122 RKVQVEFVSANPTGPLHVGHGRGAAVGDIVGNILDFSGWKVEKEYYVNDAGLQMSNLGKS 181

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              RY + L   D +  PE  Y G Y+  + +++ D +  E L+   E+ LP  +D+S +
Sbjct: 182 TQSRYFELLGQADKAPFPEDGYKGDYIYDLARQVIDDHGDEYLSVDLEESLPFFRDFSSK 241

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            ++  I+ DLK   +  D + SE   +  D   + D ++ L ++GY YE           
Sbjct: 242 VILDGIKADLKRFGVTFDCWFSEKSLYEND--QVLDTVEALRKRGYSYE----------- 288

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +   + FRST  GDD DR L +S+G  TYFA+D+AY K K++RGFD  I V G+D
Sbjct: 289 -----EDGAIWFRSTDFGDDKDRVLFRSNGVPTYFASDVAYHKNKFDRGFDLAIDVWGAD 343

Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H GYV R+ A   A+ +       V L + V L RDG  + MS R+G F+TL  V+DEVG
Sbjct: 344 HHGYVPRMRAAVEALGKSPDDNFAVTLIQFVNLLRDGEQVSMSTRSGQFVTLSDVIDEVG 403

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + R++   LDFD    K +S +NPVFYVQYA AR  SI R  +D        
Sbjct: 404 VDATRFYFVMRRSDSHLDFDLELAKRESSDNPVFYVQYANARIASITRNLRD-------- 455

Query: 479 LFPRNVIPQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                 +P   E D S      E +LI  L+ +P  +E A +   P+++  Y++DLA  F
Sbjct: 456 --KGIAMPSVDELDESLISSSEEKKLITRLSMFPEEVEKAAVEMAPHRIVNYVHDLAGDF 513

Query: 533 HGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  ++  R   ENP               R+ LV A   ++ + L I+G+ +P  M
Sbjct: 514 HSFYNAHRVLDENPS-----------RPSRILLVKATHVVLTNALRILGISAPERM 558


>gi|15616370|ref|NP_244675.1| arginyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139930|sp|Q9K6C1|SYR1_BACHD RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|10176433|dbj|BAB07527.1| arginyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 556

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/557 (36%), Positives = 323/557 (57%), Gaps = 36/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           +++E P++ AHG  +TN AM L+R     P  IAE + A++ +    ++ + IAG GFIN
Sbjct: 33  VILETPKEKAHGDFATNMAMQLARVAKKAPRLIAEELTAKLDRKRAAIEKIEIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L  SYLR+++ +++ +   YG   +GKG KV +EFVSANPTG +H+GH R A VGD L
Sbjct: 93  FFLDNSYLREMIPTVLRAESAYGETNVGKGKKVQVEFVSANPTGNLHLGHARGAAVGDAL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++A +GY+V+REYYINDAG QIN LALS+  RY QAL   + D+PE  Y G  +   G
Sbjct: 153 CNILAKAGYDVSREYYINDAGNQINNLALSLEARYFQAL-GMEKDMPEDGYHGEDIIQFG 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+ +  + ++   E+ L   ++Y ++  ++ I+ DL+   +  D + SE   +    
Sbjct: 212 KDLAETHGDKFVHESSEERLAFFREYGLKRELEKIKSDLEEFRVPFDNWYSETSLYT--T 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   ++ L  +G  YE                    L FRST  GDD DR L+K+DGS
Sbjct: 270 GKVEKTLNVLKEKGKTYE----------------QDGALWFRSTEYGDDKDRVLVKNDGS 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D++Y + K+ RGF+ +I + G+DH GY+ R++A   A+  +K Q++V + ++V 
Sbjct: 314 YTYLTPDISYHEDKFLRGFEKLINIWGADHHGYIPRMKAAIQALGYEKDQLDVQIIQMVS 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L+++G  +KMSKR G  +TLR +++EVG D+ R+    R     LDFD      +S ENP
Sbjct: 374 LFQNGEKVKMSKRTGKAVTLRDLMEEVGIDATRYFFAMRSADSHLDFDMDLAVSKSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           V+YVQYA+AR  S+ R+ K++    D   DL P   I  E E+D     L+  + E+P V
Sbjct: 434 VYYVQYAHARVCSMLRKGKELGLSFDESTDLSP---IASEKEYD-----LLKKIGEFPEV 485

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   Q P+++  Y+++LAS  H  ++        + +   N + +  RL L+ A   
Sbjct: 486 VAEAAQKQMPHRITNYVHELASTLHSFYNAE------QVINPENDEQSKARLALMKATQV 539

Query: 569 IINSGLNIIGVESPNEM 585
            + + L+++GVE+P  M
Sbjct: 540 TLKNALSLVGVEAPERM 556


>gi|269792262|ref|YP_003317166.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099897|gb|ACZ18884.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 559

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/562 (36%), Positives = 318/562 (56%), Gaps = 42/562 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I +ERP+    G  + +AAM L +  G++P  +A+ I A+I  DP V++V +AG GFIN
Sbjct: 33  KIYLERPKREGQGDWACSAAMQLCKSFGVNPRELADEISAKIAEDPSVETVEVAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + LS  ++  ++  ++ +G +YGR   G G KV +EFVSANPTGP+H+GH R A VGD  
Sbjct: 93  ITLSKGWVGDLIRRVISAGADYGRVNDGGGKKVQVEFVSANPTGPLHMGHGRGAAVGDIT 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHV 209
           AS+++++G+ V REYYINDAG Q+  L  S   RY + +   D +  PE  Y G Y+  +
Sbjct: 153 ASILSYAGWNVEREYYINDAGLQMEMLGRSARSRYFELIGRGDEAPFPEEGYHGDYMYDI 212

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +E+ D+    L + PEE+ +P+  D + +  +K I+ DL+   ++ D++ SE   + GD
Sbjct: 213 AREILDEKGPSLADLPEEEAVPLFTDLAYERTLKWIKRDLEDFGLKFDVWFSERSLYVGD 272

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   I+ L  +GY YE                    + F+ST  GD+ DR L++S+G
Sbjct: 273 Q--VERTIEALKARGYAYEA----------------EGAIWFKSTAFGDEKDRVLIRSNG 314

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           + TYF +D+ Y K KY+RGFD +I V G+DH GY+ R+++  AA+      + VLL + V
Sbjct: 315 APTYFMSDVVYHKNKYDRGFDLVIDVWGADHHGYIPRMKSAVAAMGRDPEDLQVLLIQFV 374

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R+G P+ MSKRAG F+TLR V+DEVG D+ RF  + R+    LDFD    K  S +N
Sbjct: 375 TLLRNGEPVSMSKRAGAFVTLRDVMDEVGVDATRFFFVMRRCDSHLDFDLELAKRASSDN 434

Query: 450 PVFYVQYAYARCRSIFRQA------KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           PV+YVQYA+AR  SI R++      +    DLD  L     +P+       EL+L   +A
Sbjct: 435 PVYYVQYAHARMCSIERESDARGLERPSMDDLDPSLLS---LPE-------ELRLATVIA 484

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P  I  A     P+++A+Y  +L+  FH  ++  R       +      +   R+ L+
Sbjct: 485 KFPEEIRKAARDMAPHRIAYYAQELSEAFHSFYNVAR-------IIGEEEPVRRNRMLLM 537

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A    + + L I+GV +P  M
Sbjct: 538 EAARIALRNALGILGVSAPERM 559


>gi|228955613|ref|ZP_04117611.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072831|ref|ZP_04206030.1| Arginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229082576|ref|ZP_04215039.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701008|gb|EEL53531.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710322|gb|EEL62297.1| Arginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228803982|gb|EEM50603.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 556

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/569 (36%), Positives = 330/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++   +D D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAVDGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|23100470|ref|NP_693937.1| arginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|38372527|sp|Q8EM45|SYR_OCEIH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22778703|dbj|BAC14971.1| arginine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 556

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/575 (36%), Positives = 318/575 (55%), Gaps = 45/575 (7%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           I  ++  E ++ D I++E+P+D AHG  +TN AM L+R     P  IA+ I +++ K + 
Sbjct: 20  IHAELATEDQVPD-IILEKPKDKAHGDFATNIAMQLARVAKKAPRQIADDIASKLNKSEA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            V+ V IAG GFIN ++   +L +++ +++ +G  YG++  G G KV +EFVS NPTG +
Sbjct: 79  SVEKVEIAGPGFINFFMKQDFLGEVIDTVLSAGDNYGKSTGGNGEKVQVEFVSVNPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A  GD L ++ A +GYEV REYYINDAG QIN L LSV  RY Q +   D D+
Sbjct: 139 HLGHARNAAFGDVLCNVFAAAGYEVEREYYINDAGNQINNLGLSVEARYLQEI-GQDVDM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  + KEL  K   +  +   E+ L   K+Y ++A ++ I  DLK   ++ 
Sbjct: 198 PEDGYQGQAIIEIAKELVKKDGEKWADKDHEERLDFFKEYGLKASLRNIESDLKDFRVEF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D + SE    +     I D +  L   GY +E                    L F++T  
Sbjct: 258 DHWFSERSLFK--DGQIDDTLAVLDDGGYTFE----------------KDGALWFKTTEF 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR L+K DG+YTY   D+AY K K +RGFD +I V GSDH GY+ R+ A   A+  
Sbjct: 300 GDDKDRVLIKGDGNYTYLTPDIAYHKNKLDRGFDRIINVWGSDHHGYIPRMRAALQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              + +V + ++V L+  G  +KMSKR G  ++LR ++DEVG D+VR+  + R N   LD
Sbjct: 360 PVEKFDVKIIQMVNLFEAGEKVKMSKRTGKAVSLRELMDEVGIDAVRYYFVARSNDSQLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-- 494
           FD    K QS +NPV+Y QYA+AR  ++  QAK                  E+EFD S  
Sbjct: 420 FDMDLAKSQSNDNPVYYAQYAHARICTMLSQAK------------SKGFNTEAEFDASLL 467

Query: 495 ----ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               EL L+  + E P++I +A     P+K+  Y+++LA++ H  ++        + + A
Sbjct: 468 TAEKELDLLKKIGELPQMIVDAADKHTPHKVTQYIFELATLLHSFYN------AEKVLDA 521

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +N   T  R+ L+ AV   + + + IIG+ +P +M
Sbjct: 522 DNEARTHARIALMKAVRQTLANAMTIIGISAPEKM 556


>gi|228924110|ref|ZP_04087386.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835600|gb|EEM80965.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 556

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/569 (36%), Positives = 329/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++    D D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|311070252|ref|YP_003975175.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870769|gb|ADP34244.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 556

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/589 (35%), Positives = 332/589 (56%), Gaps = 43/589 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE + K  V      E+  +  +++E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQMKDVLKE-EIKAAVLKAGLAEENQIPNVILETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y+   YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEDIVASFDKGKASIEKLDIAGPGFINFYMDNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G ++ +EFVSANPTG +H+GH R A VGD+L +++A +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERIQVEFVSANPTGDLHLGHARGAAVGDSLCNVLAKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   + ++PE  Y G  +  +GK LA++Y    +   E +     ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIIAIGKRLAEEYGDRFVKEEESERQKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  +++ SE   +  +   I   ++ L +QG+VYE          
Sbjct: 240 KYELEKLRVDLENFRVPFNVWYSETSLY--ENGKIDKALEALRKQGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYQKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476
            D+VR+    R     +DFD       S +NPV+Y QYA+AR  S+ RQ ++  + P  D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNDNPVYYAQYAHARICSMLRQGEEQGLTPAAD 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + +  E E+D     L+  +  +P  +  A   + P+++  Y+YDLA+  H  +
Sbjct: 462 LDF---SAVNSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLAASLHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 514 NAE------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|94986673|ref|YP_594606.1| arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082175|sp|Q1MRU1|SYR_LAWIP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94730922|emb|CAJ54285.1| Arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 550

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/579 (36%), Positives = 325/579 (56%), Gaps = 33/579 (5%)

Query: 10  RLKNYLKE-IDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           R + YLK  ++C IK +      + VIE P++  HG L+TN A++L+  +G++P  IAE 
Sbjct: 2   RAEQYLKTCLECTIKKLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEK 61

Query: 68  IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +++ +     SV +AG GF+N+  SP++ +K ++ I+  G  YG   +G   KV IE
Sbjct: 62  IAEKLQQESTSFSSVSVAGPGFLNITFSPTFWQKTINHILSKGSSYGSCQLGNKQKVLIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +GDTLA L+ F+GY VT EYYINDAG Q+  L LS++ R +
Sbjct: 122 YVSANPTGPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L       PE YY G Y+  + K L ++   +++++ +         + +  ++  I+
Sbjct: 182 E-LSGIQVTWPEEYYKGTYIIEIAKALLEE-QPDIISYTDIDGEQASFHFGMNVILNGIK 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DLK   ++H+ + SE    +   + I   +  L   G  +E                  
Sbjct: 240 QDLKTFKVEHEEWFSERTLIK--TNAIEQTLKALECTGLTFE----------------KE 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F+ST+ GDD DR L KSD S TYFA D+AY   KY RGFD +I ++G+DH GY+ R
Sbjct: 282 GALWFQSTVFGDDKDRVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIAR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A        +++L +LV L  +G+ + MS RAG F  L  V++EVG D+ RFM 
Sbjct: 342 IKAAMQAFGHDPMTFDIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINEVGVDAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK+++  NPV+YVQYAYAR  SI R+A     DL F +   N +P
Sbjct: 402 LLRKSDAHLDFDLELVKQRTMNNPVYYVQYAYARICSIIRKAH----DLGFTITDVNEVP 457

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             +     EL L+  L ++  VI NA     P+ +  YL +LA   H +++      +  
Sbjct: 458 LSNITTKDELNLLRLLDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYA------KYP 511

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +Q+N + + + RL L+ AV  +I + LNI+GV +P  M
Sbjct: 512 VLQSNEKTIVLSRLALLQAVGQVIYNALNILGVTAPKNM 550


>gi|78357338|ref|YP_388787.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109894988|sp|Q30Z04|SYR_DESDG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78219743|gb|ABB39092.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 551

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 216/588 (36%), Positives = 331/588 (56%), Gaps = 50/588 (8%)

Query: 10  RLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           R KN+L+     +   +E    D++ IE P+D   G L+ N A++L++P  + P  +A  
Sbjct: 2   RAKNHLQTALKAVVADLELPWPDKVSIEPPKDKKFGDLAANIALVLAKPAAMPPRELAAR 61

Query: 68  IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  R++   P++  V IAG GFIN+  +P +  + +  +  +G  +G   +G G KV IE
Sbjct: 62  ITERLQQKYPEISGVEIAGPGFINVTYAPDFWHRTVHMVEQAGGRFGSVNVGNGRKVQIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +GD+LA +M F+G+E + EYYINDAG Q+  L  SV++R +
Sbjct: 122 YVSANPTGPLHIGHGRGAAIGDSLARMMRFAGFETSTEYYINDAGRQMLLLGASVYYRAK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q +   D   PE YY G Y++ +  E+   ++ +LL  PEE+ L + + Y+V  +M  IR
Sbjct: 182 Q-IKGLDVAEPEEYYRGDYIRDIASEVL-GFTPDLLEKPEEEALAVCQKYAVDTIMAGIR 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL   ++ HD++ SE      +   +    D L R G  YE                + 
Sbjct: 240 QDLADFSVSHDVWFSEKSLV--ETGAVDKTFDRLRRSGLAYE----------------ED 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FR+T  GDD +R L KS+G  TYFA+D+AY   KY+RGFD  + + G+DH GYV R
Sbjct: 282 GALWFRTTDFGDDKNRVLKKSNGYLTYFASDIAYHDNKYDRGFDLCVDIWGADHHGYVPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   A+ +     +V+L +LV L R+G  + MS RAG+F TL  VV EVG+D+ RFM 
Sbjct: 342 MRAAVQALGKPADSFDVILVQLVNLLRNGEQVAMSTRAGEFETLADVVKEVGADAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK++S +NPV+YVQYA+AR  S+ R+A +           R   P
Sbjct: 402 LSRKSDSSLDFDLELVKQRSMDNPVYYVQYAHARICSVLRKAAE-----------RGTTP 450

Query: 487 QESEFDTSELQLIVHLAE---------YPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            E+  D   L+ +VH  E         +   +E A  +   + +++YL +LAS  H  ++
Sbjct: 451 -ETHSDEELLKPLVHADEIDMLRLVDRFEDTVEAAATSLSVHHISYYLQELASALHRFYA 509

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   +P L    A + ++   RL L+ AVA ++ +GL+++GV +P  M
Sbjct: 510 N---HPVL---NAPDEQILKARLALLRAVAQVLRNGLDLLGVSAPEAM 551


>gi|118480395|ref|YP_897546.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118419620|gb|ABK88039.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 556

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 329/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVKARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++    D D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATDGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNVELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|224541964|ref|ZP_03682503.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525104|gb|EEF94209.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM
           15897]
          Length = 568

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/559 (36%), Positives = 313/559 (55%), Gaps = 38/559 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGF 88
           + I+IE P+D  HG  STN AM L+R L  +P  IA  IV  +  +   V+ V IAG GF
Sbjct: 45  ENIMIEIPKDSTHGDYSTNIAMQLTRTLHKNPREIATAIVDSLDQEAAHVEKVEIAGPGF 104

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN ++    L  +++ ++     YG+   G+G K N+EFVSANPTG +H+GH + A VGD
Sbjct: 105 INFFMKNDALTSVIAEVLSEKDNYGQTHFGEGKKYNVEFVSANPTGDLHLGHAKGAAVGD 164

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++  +M  +GY+VTREYYINDAG QI  LALS++ RY  AL++ +  +PE  Y G  +  
Sbjct: 165 SICRIMTKAGYDVTREYYINDAGKQITNLALSLYSRYL-ALFDIERPIPEDGYMGQDVID 223

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + K + +K    L    EE+ +   +    +  ++ I+D LK   +  D++ SE   + G
Sbjct: 224 IAKSIKEKEGDALTQLTEEEAIAYFRKVGTEHELQKIKDILKEFRVSFDVWFSETSLYEG 283

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   I   I+ L  +GY YE                    L FR+T  GDD DR L+K+D
Sbjct: 284 NK--IEPAINKLKEKGYTYE----------------QDGALWFRTTDFGDDKDRVLIKTD 325

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GSYTYF  D+AY   K  RG+D ++ ++G+DH GY+ R++A   A+     Q+N+ + ++
Sbjct: 326 GSYTYFTPDIAYHLSKLNRGYDYLVDLLGADHHGYINRMKAAIQALGYNADQLNIDILQM 385

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VR+  +G  +KMSKR G+ +T+R ++D++G D+ R+  + +  +   DFD    K QS E
Sbjct: 386 VRMVENGEVVKMSKRTGNAVTIRDLIDDIGVDATRYFFVAKAANTPFDFDLGLAKSQSNE 445

Query: 449 NPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           NPV+Y QYA+AR  SI R A  K+I P   F+L            +  E++L+ H+ E+ 
Sbjct: 446 NPVYYAQYAHARMCSIMRSAAEKNIEPADHFELIN----------NPKEIELLKHINEFK 495

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I +A   + P+K+A Y+  LA +FH  +           +   N++L+  RL LV A 
Sbjct: 496 NTINDAARTRAPHKIANYIQRLAQLFHSFYGD------CHVIDEENKELSSQRLALVEAT 549

Query: 567 ASIINSGLNIIGVESPNEM 585
              I + LN+IGV +P +M
Sbjct: 550 RITIANALNLIGVHAPEKM 568


>gi|282857140|ref|ZP_06266386.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585075|gb|EFB90397.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 559

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/564 (36%), Positives = 312/564 (55%), Gaps = 41/564 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  +  ERP+   HG  +TNAAM   RPLG  P  +AE I  RI  D  +  V +AG GF
Sbjct: 30  LGELHFERPKQENHGDWATNAAMQNCRPLGCKPRDLAEDIARRIGSDRRIRRVEVAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN YLS  ++  I+  ++ +G +YGR  +GKG K  +EFVSANPTGP+HVGH R A VGD
Sbjct: 90  INFYLSNLWMGDIVRDVLAAGSDYGRVDLGKGRKAQVEFVSANPTGPLHVGHGRGAAVGD 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLK 207
              ++++F+G+ V +EYY+NDAG Q+N L  S   RY + L   +    PE  Y G Y+ 
Sbjct: 150 VTGNILSFAGWNVEKEYYVNDAGLQMNILGRSTQSRYFELLGRPEKFPFPEESYKGRYIY 209

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +E+ D    E L  P E+ LP  + Y+   +++ I+++L    +  D F SE   + 
Sbjct: 210 DIAQEVVDARGEEFLERPLEESLPFFRTYAAGRILEQIKNELGEFGVTFDNFFSEKSLY- 268

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   +   +  L  +G++YE                  + L FRST  GDD DR L++S
Sbjct: 269 -DRDLVAAAVQTLKERGHLYE----------------QDEALWFRSTEYGDDKDRVLMRS 311

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +G  TYF +D+AY K K++RGF+ +I V G+DH GYV R++A   A+     +  +LL +
Sbjct: 312 NGVPTYFTSDIAYHKEKFDRGFERVIDVWGADHHGYVPRMKAAIEALGYDPKKFTILLIQ 371

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V L RDG  +KMS R+G F+ L+ VV EVG D+ R+  L R++   LDFD    K QS 
Sbjct: 372 FVNLLRDGEQVKMSTRSGQFVELQEVVREVGVDAARYYFLMRRSDSHLDFDLELAKSQSA 431

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD------TSELQLIVH 501
           +NPV+YVQYA+AR  SI ++A +              +P  S FD        E +L   
Sbjct: 432 DNPVYYVQYAHARLCSILQKAAE----------KGIAVPGVSAFDPDVIATPEEKRLFTK 481

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA++P  +  A    EP+++  Y+Y+LA  FH ++++G        +   +  L    L 
Sbjct: 482 LAQFPEEVGRAAADLEPHRIVSYVYELAGDFHSYYNNGGR------ILEESGALRDSHLL 535

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           +V A+ ++I + L ++G+ +P +M
Sbjct: 536 MVAAIRTVIANALRLLGISAPEKM 559


>gi|308272771|emb|CBX29375.1| Arginyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 554

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/555 (36%), Positives = 336/555 (60%), Gaps = 35/555 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINLY 92
           IE P+  AHG  S+N AM+++    + P  IAE I A I+  +  +D + IAG GFIN +
Sbjct: 32  IEEPKLSAHGDFSSNFAMVMASLQKMPPRKIAEAITAEIEDTEGVIDKIEIAGPGFINFF 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++P     +L +I     ++G   IGK  KV +EFVSANPTGP+HVGH R A VGD+ A+
Sbjct: 92  INPCAWHSVLRTIYEKDEKFGSCDIGKNRKVQVEFVSANPTGPLHVGHGRGAAVGDSTAN 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +++F GY+V REYYIND+G QI+TL  SV+ RY++ L+    + P   Y G Y++ + ++
Sbjct: 152 ILSFCGYDVQREYYINDSGRQISTLGRSVYLRYKE-LHEEKINFPGDCYQGDYIRDIAQK 210

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           + ++   +LL+ PEEK +     ++   ++  I++DL+   ++ D + SE      D   
Sbjct: 211 IKNENQIDLLDEPEEKAVMFCARFAADDILADIKNDLELFGVKFDNWYSEQSLF--DSGK 268

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++ ++++   +  +YE                      F+++  GD+ DR +++++G  T
Sbjct: 269 VKSVLEDFKNKNIIYE----------------KDGAFWFKTSEYGDEKDRVVIRNNGLTT 312

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY   K++RGF+ ++ V G+DH GY++R+ A   A  +K+ Q NV+L +LV L 
Sbjct: 313 YFASDIAYHIDKFDRGFERIVDVWGADHHGYIQRICASIEASGQKEDQFNVILIQLVNLL 372

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           R+G P+ MS R+G+F+TL  VV EVG+D+ RF+ L R     LDFD    K++S ENPV+
Sbjct: 373 RNGEPVAMSTRSGEFVTLEDVVKEVGADAARFIFLTRHYESHLDFDLELAKKKSNENPVY 432

Query: 453 YVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIE 510
           YVQY +AR  SI R+A ++   ++ +D   +N+ + +E+E    E+Q++  L+ YP V++
Sbjct: 433 YVQYVHARISSIIRKADELGVKEIRYD--DKNITVLKEAE----EIQILKILSTYPEVVK 486

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           ++    EP+++ +YL +LA+ FH +++  R       V +++  +T  RL LV A+  +I
Sbjct: 487 SSAELLEPHRITYYLMNLAAAFHSYYNKCR-------VLSDDPVITKNRLFLVLAIKKVI 539

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P  M
Sbjct: 540 RNGLKLLGVSAPEIM 554


>gi|77918356|ref|YP_356171.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|109895013|sp|Q3A6K6|SYR_PELCD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77544439|gb|ABA88001.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 554

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/588 (38%), Positives = 325/588 (55%), Gaps = 47/588 (7%)

Query: 9   SRLKNYLKEI--DC--KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            RL+ Y+ E    C  + ++    +  I +E P    HG  STN AM ++R     P  I
Sbjct: 3   QRLRQYIGEALQACFDQQQLHSGTIPEINLEVPAHAEHGDFSTNVAMAMARAEKKAPRKI 62

Query: 65  AELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE IVA +     + S V IAG GFIN YL+P     +L  +V  G  +GR   G G KV
Sbjct: 63  AETIVAALGEGGGMWSRVEIAGPGFINFYLTPRCWFGVLDEVVRRGDLFGRTHTGNGRKV 122

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+H+GH R A  GD +A+++  +GYEV REYYINDAG Q+ TL  S+  
Sbjct: 123 QVEFVSANPTGPLHIGHGRGAATGDAVAAVLGAAGYEVQREYYINDAGNQMLTLGRSLLL 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY++ L     + P   Y GVY+  + +E+ +     L + PEE+ L    +Y    +  
Sbjct: 183 RYRE-LLGETIEFPTDCYQGVYVIDLAREVLESEGERLRDLPEEEALRFFANYGGDKIRA 241

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I +DL A  ++ D + SE   +  D   +   I  L  +G  YE               
Sbjct: 242 GIDEDLAAFGVRFDNWYSEQSLY--DRQEVERGIALLKERGLTYE--------------- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                + FR+T  GDD DR L++S+G+ TYFA+D+AY K K+ERGFD +I V G+DH GY
Sbjct: 285 -KDGAIWFRTTDYGDDKDRVLIRSNGATTYFASDVAYHKEKFERGFDTVIDVWGADHHGY 343

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R++AV A +      + ++L +LV L R G  + MS R+G+F+TLR V+DEVG D+ R
Sbjct: 344 VPRMKAVLAGLDRNPEDLQIILVQLVNLLRGGQQVAMSTRSGEFVTLREVIDEVGRDACR 403

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDL---DF 477
           F  L R++   LDFD    K+QS ENPV+YVQYA+AR  SI R A+D     P+L   DF
Sbjct: 404 FFFLMRRSDSQLDFDLDLAKKQSTENPVYYVQYAHARVCSINRNAEDQGVAMPELGEVDF 463

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D                EL L   L+ YP V++ A    EP+++ FYL +LA+ FH +++
Sbjct: 464 DCLTLE----------DELALTKLLSRYPEVVDGAAEHFEPHRVVFYLQELAARFHSYYN 513

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            GR       V  ++  ++  RL LV+ V +++++ L ++GV +P  M
Sbjct: 514 KGR-------VLVDDPDVSRARLYLVNCVRTVLHNALVLLGVSAPERM 554


>gi|229193615|ref|ZP_04320559.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228589920|gb|EEK47795.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 556

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|149182460|ref|ZP_01860935.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849853|gb|EDL64028.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 556

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/559 (36%), Positives = 325/559 (58%), Gaps = 40/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           +++E P++ +HG  STN AM L+R     P  IA+ I A I K    ++ + IAG GFIN
Sbjct: 33  VILETPKEKSHGDYSTNMAMQLARVAKKAPRMIADDIAANIDKEAASIEKIDIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++   YL +++++I+ +G EYGR+  GKG ++N+EFVSANPTG +H+GH R A VGD+L
Sbjct: 93  FFMRNEYLTELVANILEAGDEYGRSDAGKGERINVEFVSANPTGDLHLGHARGASVGDSL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY+VTREYYINDAG QI+ LALSV  RY QAL  +D  +PE  Y G  +  +G
Sbjct: 153 CNVLDKAGYKVTREYYINDAGNQIHNLALSVEARYFQAL-GHDKAVPEDGYQGADIIGIG 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           ++LAD++  + +   EE+     ++Y ++  M+ ++ DL+   +  +++ SE   +  + 
Sbjct: 212 QKLADEFGDKYIEASEEERYKFFREYGLKFEMEKLKKDLEDFRVPFNVWYSETSLY--EN 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I D +  L    ++YE                +     FRST +GDD DR L+K+DG+
Sbjct: 270 GKIDDALKALKDNNHIYE----------------EDGATWFRSTELGDDKDRVLIKNDGT 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D++Y + K+ERG D +I + G+DH GY+ R++A   A+   + ++ V + +LV 
Sbjct: 314 YTYLTPDISYHRDKFERGHDILINIWGADHHGYIPRMKAAIEALGYDREKLEVEVIQLVH 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L+++G  +KMSKR G  +T+R +V+EVG D+VR+    R     +DFD      QS ENP
Sbjct: 374 LFKNGEKMKMSKRTGKAVTMRDLVEEVGLDAVRYFFAMRSADTHMDFDLDLAVSQSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI RQA +         D+ L                ++L+  L ++P
Sbjct: 434 VYYAQYAHARICSILRQAAEQGINFEEGTDYSLLKAE----------KTIELLKKLGDFP 483

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+ +A   + P+++A Y+ +LAS FH  ++        + +   N +LT  RL L+ AV
Sbjct: 484 GVVADAAAKRTPHRVANYINELASTFHSFYN------AEKVLDMENMELTKARLSLIKAV 537

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L +IGV +P +M
Sbjct: 538 RLTMKNALKLIGVSAPEKM 556


>gi|75758530|ref|ZP_00738650.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218900490|ref|YP_002448901.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903841|ref|ZP_04067956.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968494|ref|ZP_04129482.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74493964|gb|EAO57060.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218544147|gb|ACK96541.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228791200|gb|EEM38814.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228855750|gb|EEN00295.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 556

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 327/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDAALTVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++    D D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|206970067|ref|ZP_03231020.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229181611|ref|ZP_04308936.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206734644|gb|EDZ51813.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228601807|gb|EEK59303.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 556

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNVELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228936649|ref|ZP_04099442.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228822988|gb|EEM68827.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 556

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228942510|ref|ZP_04105045.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975443|ref|ZP_04135998.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982076|ref|ZP_04142368.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228777614|gb|EEM25889.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784237|gb|EEM32261.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817103|gb|EEM63193.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326943161|gb|AEA19057.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 556

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 329/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++    D D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228911203|ref|ZP_04075008.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848379|gb|EEM93228.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 556

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 327/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++    D D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|42784538|ref|NP_981785.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408378|sp|Q72X85|SYR_BACC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42740470|gb|AAS44393.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 556

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETSTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|49481250|ref|YP_039355.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394157|sp|Q6HAS1|SYR2_BACHK RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|49332806|gb|AAT63452.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 556

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKSLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|206975865|ref|ZP_03236776.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962853|ref|YP_002341431.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098835|ref|YP_002532893.1| arginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229142106|ref|ZP_04270631.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229199487|ref|ZP_04326148.1| Arginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206745959|gb|EDZ57355.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064150|gb|ACJ78400.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242894|gb|ACM15604.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|228583892|gb|EEK42049.1| Arginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228641395|gb|EEK97701.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324329312|gb|ADY24572.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 556

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|30023394|ref|NP_835025.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|52140201|ref|YP_086631.1| arginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|196040960|ref|ZP_03108257.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196045443|ref|ZP_03112674.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225867345|ref|YP_002752723.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|228917976|ref|ZP_04081508.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229094476|ref|ZP_04225545.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229130611|ref|ZP_04259567.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147903|ref|ZP_04276244.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229158924|ref|ZP_04286981.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|229187591|ref|ZP_04314729.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|254724022|ref|ZP_05185807.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254724717|ref|ZP_05186500.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|296505786|ref|YP_003667486.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|38372513|sp|Q814Q8|SYR_BACCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81685308|sp|Q630N6|SYR2_BACCZ RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|29898955|gb|AAP12226.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|51973670|gb|AAU15220.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|196023650|gb|EDX62326.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196028128|gb|EDX66738.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|225787404|gb|ACO27621.1| arginine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228595843|gb|EEK53525.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228624535|gb|EEK81305.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228635553|gb|EEK92042.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228652950|gb|EEL08832.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228688860|gb|EEL42690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228841641|gb|EEM86753.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|296326838|gb|ADH09766.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 556

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|218233285|ref|YP_002370139.1| arginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218161242|gb|ACK61234.1| arginine--tRNA ligase [Bacillus cereus B4264]
          Length = 556

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|196036513|ref|ZP_03103908.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|218906541|ref|YP_002454375.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228930370|ref|ZP_04093372.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229124865|ref|ZP_04254042.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|195990846|gb|EDX54819.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|218538647|gb|ACK91045.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228658573|gb|EEL14236.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228829293|gb|EEM74928.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 556

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|300117879|ref|ZP_07055646.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724743|gb|EFI65418.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 556

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 327/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYNVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228961626|ref|ZP_04123235.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051033|ref|ZP_04194581.1| Arginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229112776|ref|ZP_04242308.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229153525|ref|ZP_04281703.1| Arginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630129|gb|EEK86780.1| Arginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228670610|gb|EEL25922.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228722342|gb|EEL73739.1| Arginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798108|gb|EEM45112.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 556

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228949088|ref|ZP_04111358.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228810529|gb|EEM56880.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 556

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGRDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229164310|ref|ZP_04292241.1| Arginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619153|gb|EEK76048.1| Arginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 556

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKIVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|47570345|ref|ZP_00240989.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47552987|gb|EAL11394.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 556

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKVINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|288819194|ref|YP_003433542.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788594|dbj|BAI70341.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752776|gb|ADO46259.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 551

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 214/584 (36%), Positives = 331/584 (56%), Gaps = 42/584 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S +K  +KEI   I +E        +E+P++ + G LSTN A ++++ L ++P  +A+
Sbjct: 5   LESSIKETIKEI-YGINIEG-----FTVEKPKEESLGDLSTNVAFLVAKELKINPKDVAQ 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  ++    +   +  A  GFIN   S ++ R+    ++    +Y    IGKG  V IE
Sbjct: 59  ELAKKL---SNKKMLAKASGGFINFTFSENFWREEFEKLLKEREKYFVEDIGKGESVQIE 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R AVVGD LA+L+   GY V REYYINDAG Q+  L LSVF RY 
Sbjct: 116 FVSANPTGPLHLGHGRGAVVGDVLANLLETYGYRVVREYYINDAGYQVYLLGLSVFCRYM 175

Query: 187 QALYNNDSDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           +     D++L + Y    Y G Y+K + +++   Y   LL    +K +  ++DY+V+ ++
Sbjct: 176 ELFGQEDAELKQVYEREGYKGSYIKKLAEDVKAFYGDALLKEERQKAIERLRDYAVKRLL 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + IRDDL+ LNI+ D++ SE   +  +   +  +I+ L  +GY YE              
Sbjct: 236 EEIRDDLELLNIKFDVWYSERSLY--EEGKVEQVINLLRERGYTYE-------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
               + L FRST  GDD DR L++SDG+YTYFA+D+AY   KY+RGF  +I V G+DH G
Sbjct: 280 --KDQALWFRSTDFGDDKDRVLIRSDGTYTYFASDVAYHWEKYKRGFARVINVWGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+   +A+   +  ++V   ++VRL+  G  ++MSKR G+F+TLR +V+EVGSD+V
Sbjct: 338 YLPRLKGALSALGVPQNWLHVQFVQMVRLFSAGQEVRMSKRTGEFVTLRELVEEVGSDAV 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-DLDFDLFP 481
           RF  L +++   LDFD   +K++S ENPVFYVQY +AR R +FR+    F  D D +   
Sbjct: 398 RFTFLTKRSDTPLDFDIDLLKKKSSENPVFYVQYMHARIRGVFREVLSRFGIDADKEELN 457

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           + V     E    EL+L+         I+ A +   P+ + + L DLA  FH +++H R 
Sbjct: 458 KFVYNLREE---QELKLVKKAVSLKDSIKEAALRWLPHIITYELIDLAKDFHNYYNHYR- 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V   +R++ + RL L   + + +   L ++ V +P  M
Sbjct: 514 ------VIVEDREVMLSRLALFKGIETSVKFALKLMKVSAPERM 551


>gi|327441472|dbj|BAK17837.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 555

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 200/569 (35%), Positives = 330/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-P 76
           ID    VE      I +E P+D A+G  +TN AM L++     P  IAE I+A +  +  
Sbjct: 19  IDQAGLVEAGTEINIHLETPKDKANGDFATNIAMQLTKLAKKPPRAIAEAILAHLTTEGT 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           D++ + IAG GF+N+ +   +L  ++++    G  YGR+  G G KV +EFVSANPTG +
Sbjct: 79  DIEKIEIAGPGFMNITVRKDFLASVVTATFEQGENYGRSTAGAGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGD+L +++ F+G++V+REYYINDAG QIN LA S+  RY+QAL   ++++
Sbjct: 139 HLGHARGASVGDSLCNVLDFAGFDVSREYYINDAGNQINNLAYSLEARYKQAL-GMEAEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +  +LA++Y + +L+  +E+     +++ ++  +  +++DLK   ++ 
Sbjct: 198 PEDGYHGPDIIGIAGKLAEEYGATILDKSDEERFKFFREHGLKLELAKLQNDLKNFRVEF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   +  +   I   +D L   G+V++                +     FRST  
Sbjct: 258 DVWYSETSLY--ENGKIDVALDKLKANGHVFD----------------EDGATWFRSTTF 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR L+K+DGSYTY   D+AY + K  RGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKDRVLIKNDGSYTYLTPDIAYHEDKLRRGFDKLINIWGADHHGYIPRMKAAIEALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            +  + V + ++V+LY++G   KMSKR G+ +T+R +V+EVG D+VR+  +       +D
Sbjct: 360 DRGTLEVDIIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QS ENPV+Y QYA+AR  SI R A +     +  L   N++  E E D    
Sbjct: 420 FDLDLAVSQSNENPVYYAQYAHARISSILRAANE--QGFEASLENLNLLVAEKEED---- 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            ++  +  +P+++ +A   + P+++A Y+ DLA+ FH  ++        + +  +N++LT
Sbjct: 474 -VLKKVGAFPQIVADAAKHRTPHRIANYIQDLAAAFHSFYN------AEKVLNQDNKELT 526

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+ AV + + + L +IGV +P +M
Sbjct: 527 EARLALITAVKTTLANALKLIGVSAPEKM 555


>gi|30265386|ref|NP_847763.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530933|ref|YP_022282.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49188199|ref|YP_031452.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317342|ref|ZP_00390301.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871340|ref|ZP_02215989.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635784|ref|ZP_02394094.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167640392|ref|ZP_02398656.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688209|ref|ZP_02879420.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708079|ref|ZP_02898527.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177651880|ref|ZP_02934463.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569103|ref|ZP_03022002.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227818129|ref|YP_002818138.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601148|ref|YP_002869577.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687194|ref|ZP_05151052.1| arginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254735489|ref|ZP_05193197.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254742250|ref|ZP_05199937.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254755835|ref|ZP_05207867.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761549|ref|ZP_05213569.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|254762174|ref|ZP_05214020.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38372560|sp|Q81JT7|SYR1_BACAN RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|30260064|gb|AAP29249.1| arginine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47506081|gb|AAT34757.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49182126|gb|AAT57502.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164713007|gb|EDR18535.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511612|gb|EDR86994.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528893|gb|EDR91650.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127052|gb|EDS95931.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667902|gb|EDT18654.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082584|gb|EDT67648.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559771|gb|EDV13757.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227006270|gb|ACP16013.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229265556|gb|ACQ47193.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 556

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 327/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
             + + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  STEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|206890670|ref|YP_002248471.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742608|gb|ACI21665.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 538

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 213/553 (38%), Positives = 321/553 (58%), Gaps = 40/553 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P++ A G LST  AM +++ L   P TIA+ I+  I      +SV +AG GFIN   
Sbjct: 25  IEIPKNEAFGDLSTPIAMEIAKKLKKPPRTIAQDIIQSIN-KSSFESVELAGPGFINFKF 83

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              ++   L +++  G  +    IG G K+ IEFVSANPTGP+H+GH R A +G  LA++
Sbjct: 84  KNDFVFSELENLLKLGELFFTQNIGNGKKIQIEFVSANPTGPLHLGHGRGAALGAALANI 143

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +GY V  EYYINDAG Q+  L LSV+   Q  L+  + ++PE  Y G Y+  + KEL
Sbjct: 144 LKEAGYNVFTEYYINDAGKQVEILGLSVYIALQN-LFGKNLEMPEECYKGEYINEIAKEL 202

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSP 272
            D Y + L N   ++    + D+S + M+  I+ DL    +  D +ISE   +H G+   
Sbjct: 203 YDLYGNSLQNKEFDEIADFLIDFSYKKMLNEIKKDLDDFGVNFDNWISERKLYHTGE--- 259

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++  I  L   G++YE                    L F ST  GDD DR ++KSDG+YT
Sbjct: 260 VQRAILKLKELGFIYE----------------KDGALWFHSTAFGDDKDRVIVKSDGTYT 303

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY K K ERGFD +I + G+DH GY++R++A   A+    +QI +LL ++V L 
Sbjct: 304 YFASDIAYHKNKIERGFDELINIWGADHHGYIQRVKAAVQALGMSDSQIKILLVQMVNLL 363

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           R+G P++MSKRAG F+TLR ++DE+G+D+ +F+ L R++   L+FD    K+QS ENPV+
Sbjct: 364 REGKPVQMSKRAGTFVTLRELIDEIGADTTKFIFLTRRHDSHLEFDIEIAKKQSHENPVY 423

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  SIF +A+        +L           F+  EL++I     YP + E +
Sbjct: 424 YVQYAHARINSIFVKAQSEPERFSGEL-----------FNEDELRIIKKALIYPMIFELS 472

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              +EP+++ FYL +LA++FH ++   R       V + N +LT  RL L  A+  ++  
Sbjct: 473 VQMREPHRITFYLQELAALFHSYYHKYR-------VISENDELTETRLSLCKAIMFVLKH 525

Query: 573 GLNIIGVESPNEM 585
           GL ++GV++P +M
Sbjct: 526 GLRMLGVKAPEKM 538


>gi|239828630|ref|YP_002951254.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511648|sp|C5D9R0|SYR_GEOSW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|239808923|gb|ACS25988.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 556

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 212/588 (36%), Positives = 331/588 (56%), Gaps = 35/588 (5%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +      R+K  +K   +      E+++ + +++E PR+ AHG  STN AM L+R   
Sbjct: 1   MNIVEQMKERIKEEIKRAVVSAGFAAEEEVPE-VILEVPREKAHGDYSTNMAMQLARIAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE IV  + K    ++ + IAG GFIN Y+   YL +++ +I+ +G  YG   +
Sbjct: 60  KPPRAIAEEIVQHMDKTKASIEKIDIAGPGFINFYMDNRYLTELIPTIIQAGASYGETNV 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GKG KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  L
Sbjct: 120 GKGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A SV  RY QAL   D ++PE  Y G  +  +GK+LA+++  + ++  E++ L   ++Y 
Sbjct: 180 AKSVEARYFQAL-GIDKEMPEDGYYGEDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +   ++ I+ DL    +  D++ SE   +      I + +  L  +G++YE      K  
Sbjct: 239 LNYELEKIKKDLADFRVTFDVWYSETSLYT--SGKIDETLALLRERGHIYE------KDG 290

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T           FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G
Sbjct: 291 AT----------WFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHQDKLRRGFTKIINIWG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+      + V + +LV LY++G  +KMSKR G  +T+R +++EV
Sbjct: 341 ADHHGYIPRMKAAIEALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+    R +   LDFD      QS ENPV+YVQYA+AR  SI RQ +++    + 
Sbjct: 401 GLDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEG 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           DL   + I  E      E++L+  L E+P  +  A I + P+++  Y+++LAS  H  ++
Sbjct: 461 DL-QLDYIQTE-----KEIELLKKLGEFPSAVSEAAIKRMPHRITGYVFELASALHSFYN 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + +   N + +  RL L+ AV   + + L +IGV +P +M
Sbjct: 515 AE------KVLDPENIEKSRARLALMKAVQITLQNALALIGVSAPEKM 556


>gi|301056832|ref|YP_003795043.1| arginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300379001|gb|ADK07905.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 556

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSEISLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|169351390|ref|ZP_02868328.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552]
 gi|169291612|gb|EDS73745.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552]
          Length = 553

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 209/581 (35%), Positives = 327/581 (56%), Gaps = 39/581 (6%)

Query: 9   SRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           + LKN LK+ I  +  VE    + I+IE PRD  HG  STN AM L++ L  +P  IA  
Sbjct: 8   ATLKNVLKKAIISRGFVEDYDQENIIIEIPRDKTHGDYSTNLAMQLTKLLKRNPREIATA 67

Query: 68  IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           IV  I K   +++ + IAG GFINL+L+   +  I+  ++     YG++  G G K N+E
Sbjct: 68  IVEAIDKETANIEKIEIAGPGFINLFLAKDAMTSIIKEVLDEKENYGKSNYGNGIKYNVE 127

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTG +H+GH + A VGD++  +M  +GY+VTREYYINDAG QI+ LALS++ RYQ
Sbjct: 128 FVSANPTGDLHLGHAKGAAVGDSICRIMEAAGYDVTREYYINDAGNQIHNLALSLYARYQ 187

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QA +  +  +PE  Y G  +  +  ++ +    + L  PE+K +   +    +  ++ I+
Sbjct: 188 QA-FGKEVTMPEDGYHGKDIIDIANKIKEIEGDKYLGLPEDKAIAYFRAKGTEYELQKIK 246

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D L    +  D++ SE   +  + + +   I+ L   GY YE                + 
Sbjct: 247 DILNEFRVSFDVWFSETSLY--EENKVVPTIEKLKEAGYTYE----------------ED 288

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F+ST  GDD +R L+KSDGSYTY   D+AY   K +RG++ ++ ++G+DH GY+ R
Sbjct: 289 GALWFKSTEFGDDKNRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYINR 348

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+     Q+N+ + ++VR+  +G P+KMSKR G+ +T++ +++E+G D+ R+  
Sbjct: 349 MKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRYFF 408

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNV 484
           + +  +   DFD    K  S ENPV+Y QYA+AR  SI  QA     D    FDL   N 
Sbjct: 409 VSKAANTPFDFDIGLAKSHSNENPVYYAQYAHARMCSIKTQADKAKIDYSDKFDLLVNN- 467

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                     E++L+ H+ E+  VI ++ I + P+K+A Y+  LA +FH  ++       
Sbjct: 468 ---------KEIELVKHINEFRNVIVDSAINRAPHKIANYIQRLAQLFHSFYN------E 512

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  NN +L+  RL LV A    + + LN+IGV +P +M
Sbjct: 513 CYVIDENNIELSKQRLSLVEATRITMANALNLIGVSAPEKM 553


>gi|229099792|ref|ZP_04230716.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105951|ref|ZP_04236573.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228677435|gb|EEL31690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228683538|gb|EEL37492.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 556

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 326/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|218885953|ref|YP_002435274.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701474|sp|B8DNX4|SYR_DESVM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218756907|gb|ACL07806.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 551

 Score =  367 bits (943), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 206/561 (36%), Positives = 318/561 (56%), Gaps = 38/561 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88
           ++  +E PRD + G L+ N A+++S+  G+ P  +A  +   ++  DP + SV IAG GF
Sbjct: 24  EKATLEPPRDKSFGDLAANIALVISKDAGVPPRELASRLAGALRDSDPAIASVDIAGPGF 83

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+  SP + R+ +  +  +G  YG   +G G K  +E+VSANPTGP+H+GH R A +GD
Sbjct: 84  LNVTYSPDFWRETVLHVEAAGDRYGATAVGAGRKAQVEYVSANPTGPLHIGHGRGAALGD 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA ++ F+GY+VT EYYINDAG Q+  L LSV+ R  + L      LPE +Y G Y+K 
Sbjct: 144 CLARVLRFAGYDVTTEYYINDAGRQMRLLGLSVWLRALE-LSGRPFTLPEDFYRGDYIKD 202

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +  E+  K    L++ PE +      +Y++ ++M  I+ DL    ++H ++ SE    R 
Sbjct: 203 IAAEMLAK-DPGLVDLPEAEGQDRCFEYAMNSIMDGIKQDLADFRVEHQVWFSELSLVR- 260

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +    + L   G  +E                    L FR+T +GDD DR L KSD
Sbjct: 261 -EGAVEKTFERLKAAGLAFE----------------QDGALWFRTTTLGDDKDRVLRKSD 303

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+ TYFA+D+AY   KY+RGFD ++ + G+DH GYV R+ A  AA+ ++  Q +V+L +L
Sbjct: 304 GTLTYFASDIAYHDNKYDRGFDLVVDIWGADHHGYVPRMRAAVAALGKRPEQFDVILVQL 363

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L ++G  I MS RAG F TL  VV EVG+D+ RFM L RK+   LDFD   VK++S +
Sbjct: 364 VNLLQNGEQIAMSTRAGQFETLHDVVREVGADAARFMFLSRKSDSHLDFDLELVKQRSMD 423

Query: 449 NPVFYVQYAYARCRSIFRQAKD---IFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           NPV+YVQYA+AR  ++ R+A +   + P  LD        +P+       EL L+  +  
Sbjct: 424 NPVYYVQYAHARVCAVLRKAAERAIVLPARLDAAALAPLTLPE-------ELDLLRLVDR 476

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            P  +  A     P+ ++FYL ++A   H +++      ++  + A + +  + RL L+ 
Sbjct: 477 MPDTLSAAAEGLAPHHVSFYLMEVAGALHSYYA------KVPVLNAADAETIVARLALLR 530

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV   + +GLN++GVE+P  M
Sbjct: 531 AVGQAVANGLNLLGVEAPEAM 551


>gi|229118855|ref|ZP_04248202.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664511|gb|EEL20006.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 556

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 205/569 (36%), Positives = 326/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRNTLQNALAIVGVSAPEKM 556


>gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 556

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 213/588 (36%), Positives = 332/588 (56%), Gaps = 35/588 (5%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +      R+K  +K   +   +  E+++ D +++E PR+ AHG  STN AM L+R   
Sbjct: 1   MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPD-VILEVPREKAHGDYSTNMAMQLARIAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE IV    +    V  + IAG GFIN Y+   YL +++  I+ +G  YG   +
Sbjct: 60  KPPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNV 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GKG KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  L
Sbjct: 120 GKGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A SV  RY QAL   D ++PE  Y G  +  +GK+LA+++  + ++  E++ L   ++Y 
Sbjct: 180 AKSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++  ++ I+ DL    +  D++ SE   ++     I + +  L  +G++YE      K  
Sbjct: 239 LRYELEKIKKDLADFRVTFDVWYSETSLYK--SGKIDEALAVLRERGHIYE------KDG 290

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T           FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G
Sbjct: 291 AT----------WFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A  AA+      + V + +LV LY++G  +KMSKR G  +T+R +++EV
Sbjct: 341 ADHHGYIPRMKAAIAALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+    R +   LDFD      QS ENPV+YVQYA+AR  SI RQ +++    + 
Sbjct: 401 GLDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEG 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           DL   + I  E      E++L+  L E+P  +  A + + P+++  Y+++LAS  H  ++
Sbjct: 461 DL-QLDYIQTE-----KEIELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYN 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + +   N + +  RL L+ AV   + + L +IGV +P +M
Sbjct: 515 AE------KVLDPENAEKSRARLALMKAVQITLQNALALIGVSAPEKM 556


>gi|302390698|ref|YP_003826519.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302201326|gb|ADL08896.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 568

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 216/594 (36%), Positives = 335/594 (56%), Gaps = 42/594 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIV---------IERPRDCAHGHLSTNAAMILSRP 56
           D  +++++ LKE+     ++K + D ++         IE P+  AHG  + N AM  +R 
Sbjct: 3   DVKAQIQDKLKELTVS-ALKKAVDDGVINLTKIPEFNIEVPQAEAHGDFAANVAMTAARE 61

Query: 57  LGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
             + P  IAE+I  R++I    ++ + +AG GFIN YLSP++   ++  I+  G  YGR 
Sbjct: 62  AKMPPRKIAEIIKERMEISGTGIERIEVAGSGFINFYLSPTWAHGVIPVILSEGDAYGRQ 121

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IGKG KV +EFVSANPTGPMH+G+ R A +GD LAS++  +GY+VTRE+YINDAG QI 
Sbjct: 122 DIGKGKKVQVEFVSANPTGPMHMGNARGAALGDALASVLEMAGYDVTREFYINDAGNQIE 181

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              LS+  RY + L   +  +PEG Y G  +K   +EL +K     L+    +      +
Sbjct: 182 NFGLSLEARYLE-LLGLEGRIPEGGYHGEDIKDHMRELIEKEGDRFLHVDPAERRAYFIE 240

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y+++  +  ++ DL+   +  D++ SE   H  D   ++++I  L  +GY YE       
Sbjct: 241 YALKKNIDRMKRDLENFGVHFDVWFSERSLH--DEGKVQEVIRLLTERGYTYE------- 291

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L F++T  G   D  L++ +G  TYFA+D+AY K K++RGF+ +I +
Sbjct: 292 ---------KDGALWFKATEFGVPKDEVLVRQNGIPTYFASDIAYHKDKFDRGFEWVIDI 342

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V R++   AA+     ++ +++ +LVRLYR+G   +MSKR G  +TL  +V+
Sbjct: 343 WGADHHGHVARMKGALAALGYDPEKLTIIIMQLVRLYRNGEIARMSKRTGRAVTLADLVE 402

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IF 472
           EVG D+ RF    R     LDFD     +QS+ENPV+YVQYA+AR  SIFRQA +     
Sbjct: 403 EVGKDAARFFFNLRGADTHLDFDLDLAVKQSEENPVYYVQYAHARISSIFRQAAEQGVAV 462

Query: 473 PDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           P++  D  P ++    S+  D +E+QLI  LA++P  I  A     PY++A Y  +LA+ 
Sbjct: 463 PEVR-DRSPEDLEKLLSKLTDETEIQLIKKLADFPGEIRVAASTLSPYRIANYTLELAAA 521

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  ++  R       V  ++  LT  RL LV AV  ++ +   I+G+ +P+ M
Sbjct: 522 FHSFYNVCR-------VLTDDPDLTAARLMLVKAVQQVLRNAFRILGISAPDRM 568


>gi|212640560|ref|YP_002317080.1| arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226701372|sp|B7GMJ3|SYR_ANOFW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212562040|gb|ACJ35095.1| Arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 556

 Score =  366 bits (940), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 215/589 (36%), Positives = 325/589 (55%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +      +LK  +KE  I   +  E  +   +++E P+D AHG  STN AM L+R   
Sbjct: 1   MNIVEQMKQKLKEEIKEAVIRSGVATEADV-PSVILETPKDKAHGDYSTNVAMQLARVAK 59

Query: 59  LDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE IV     +   V  V IAG GFIN Y+   YL +++ +I+ +G  YG   +
Sbjct: 60  KAPRMIAEDIVRHFNGEAVFVKKVDIAGPGFINFYMDNRYLTELVPAILQAGDAYGETNV 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G+G KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  L
Sbjct: 120 GQGQKVQVEFVSANPTGSLHLGHARGAAVGDSLCNILKKAGFDVTREYYINDAGNQIANL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A SV  RY QAL     D+PE  Y G  +  +GK+LA+++  + +   E++ L + ++Y 
Sbjct: 180 AKSVEARYFQAL-GIKKDMPEDGYFGEDIIELGKKLAEEHGDKFVALDEQERLQLFREYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +   M  I+ DL    +  D++ SE   +H G    I   ++ L  +G++YE        
Sbjct: 239 LAFEMDKIKKDLADFRVTFDVWYSETSLYHNG---KIDKALETLREKGHIYE-------- 287

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                         FRST  GDD DR L+K DG+YTY   D+AY + K ERGF+ +I + 
Sbjct: 288 --------QDGATWFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLERGFEKIINIW 339

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R++A  AA+      + V + +LV LY++G  ++MSKR G  +TLR +++E
Sbjct: 340 GADHHGYIPRMKAAIAALGYDPDVLEVEIIQLVSLYQNGEKVRMSKRTGKAVTLRDLMEE 399

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ R+    R +   LDFD      QS ENPV+Y QYA+AR  S+ RQ ++     D
Sbjct: 400 VGLDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYAQYAHARVCSMLRQGEEQGWRYD 459

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            DL          E    E+ L+  L E+P  +  A + + P+++  Y++DLAS  H  +
Sbjct: 460 GDL------SFTYELAEKEIDLLKKLGEFPSAVAEAAVKRSPHRMTNYIFDLASALHSFY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + + A N + +  RL L+ AV   + + L ++GV +P +M
Sbjct: 514 NAE------KVLDAANVEKSRARLALMKAVQITLKNALALVGVHAPEKM 556


>gi|319935203|ref|ZP_08009642.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809853|gb|EFW06241.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 553

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 210/578 (36%), Positives = 328/578 (56%), Gaps = 37/578 (6%)

Query: 11  LKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           LK  LK+  ID    VE   LD+IVIE P+D  HG  S+N AM L++ L  +P  IA+ I
Sbjct: 10  LKKVLKQAIIDLDF-VEDYNLDQIVIEIPKDKTHGDYSSNIAMQLTKILKRNPREIAQGI 68

Query: 69  VARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           +  +  D  ++D V IAG GFINL+L    +  I+  ++V    YG++  GKG K NIEF
Sbjct: 69  IETMNKDAGNIDHVEIAGPGFINLFLRKDAMTSIIKEVLVEQDHYGQSDFGKGIKYNIEF 128

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTG +H+GH + A VGD++  +M  +GY+VT+EYYINDAG QI  LALS++ RY Q
Sbjct: 129 VSANPTGDLHLGHAKGAAVGDSICRIMNAAGYDVTKEYYINDAGNQITNLALSLYARYLQ 188

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           AL   +  LPE  Y G  +  + + + ++Y  +  +  E++ +   +    +  ++ I+D
Sbjct: 189 AL-GQERQLPEDGYYGKDIIQIAESIKNEYGDKFAHVDEKEAIAYFRSIGTEHELQKIKD 247

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            LK   + HD++ SE   +    + I   I  L  QGY YE                   
Sbjct: 248 ILKEFRVVHDVWFSETSLYA--ENKIEPTIQRLKDQGYTYEA----------------EG 289

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L F+ST   DD DR L+KSDGSYTY   D+AY   K +RG++ ++ ++G+DH GY+ R+
Sbjct: 290 ALWFKSTEFDDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYINRM 349

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +A   A+     Q+N+ + ++VR+  +G  +KMSKR G+ +T++ ++D++G D+ R+  +
Sbjct: 350 KAAIQALGYNADQLNIDIMQMVRMVENGEVVKMSKRTGNAVTIKDLIDDIGVDASRYFFV 409

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +  S   DFD    K +S +NPV+Y QYA+AR  SI RQA+ +  ++  D +     P+
Sbjct: 410 SKAASSPFDFDLGLAKSKSNDNPVYYAQYAHARMCSIERQAQTVGIEV-ADHYELLTHPK 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                  E++L+ H+ E+   I  +   + P+K+A Y+  LA +FH  ++          
Sbjct: 469 -------EIELVKHINEFRNEIVESAKQRAPHKIANYIQRLAQLFHSFYND------CYV 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   NR+L+  RL LV A    + + LN+IGV +P +M
Sbjct: 516 IDEANRELSSQRLSLVRATQITLKNALNLIGVSAPEKM 553


>gi|229136179|ref|ZP_04264932.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647338|gb|EEL03420.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 556

 Score =  366 bits (939), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 325/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEDLVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL +  +  
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++   +  D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAIGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229176040|ref|ZP_04303534.1| Arginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607384|gb|EEK64712.1| Arginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 556

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 326/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAAGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNSLAIVGVSAPEKM 556


>gi|229020582|ref|ZP_04177323.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026799|ref|ZP_04183131.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734522|gb|EEL85184.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228740720|gb|EEL90977.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 556

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 203/569 (35%), Positives = 326/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +++E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VILESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|85860177|ref|YP_462379.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|109895044|sp|Q2LVV5|SYR_SYNAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85723268|gb|ABC78211.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 562

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 210/556 (37%), Positives = 323/556 (58%), Gaps = 33/556 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90
           + +E  +D  HG  +TN AM+++    ++P  IAE+I +  +    + +   IAG GFIN
Sbjct: 38  VEMEMTKDTVHGDYATNFAMVMASHARMNPRKIAEMISSHFRDGEQILEKTEIAGPGFIN 97

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  +   + L  I   G  YG    G+G KV +EFVSANPTGP+H+GH R AVVGD +
Sbjct: 98  FFVRENVWAEQLKDIESLGNHYGSAETGRGKKVQVEFVSANPTGPLHIGHARGAVVGDVI 157

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  SGYE+ REYYINDAG Q+N L  SV++RYQ+ L     + P+  Y G Y++ + 
Sbjct: 158 ANILGMSGYEIFREYYINDAGNQMNNLGKSVWYRYQE-LLGRSVEFPDTCYQGDYIREIA 216

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            ++  K     L   E+  +    DY+   +++ I+ DLK   I  D + SE + +  D 
Sbjct: 217 GDILKKDGDIHLTSNEDSNIRFFTDYAAGIILEEIKQDLKDFGIVFDKYFSERELYVNDG 276

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  ++ +L  +G++Y                 D + L F++T  GDD DR +++ +G 
Sbjct: 277 --VARLLADLEEKGFIYR----------------DDETLWFKTTDFGDDKDRVVVRKNGE 318

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY K KYERGFD++I + G+DH GY+ R+ A   A+   K  + V+L +LV 
Sbjct: 319 PTYFAADIAYHKNKYERGFDSVIDIWGADHHGYIPRMHAGIQALGHSKDALRVVLVQLVN 378

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG P+ MS R+G+F+T++ VVDEVG D+ R+  L R++   LDFD    K QS ENP
Sbjct: 379 LLRDGKPVAMSTRSGEFVTMKEVVDEVGRDAARYNFLMRRSDSHLDFDLEVAKRQSNENP 438

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+YVQYA+AR  SI R AK+   +L  F+    NV PQ       E+ LI  L  +P V+
Sbjct: 439 VYYVQYAHARICSILRMAKERGIELPSFE----NVEPQLLRI-PEEIALIKTLTRFPEVV 493

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E +    EP+++ FYL DLA +FH +++  +       V +++  +T  RL LV  + ++
Sbjct: 494 EGSARTLEPHRITFYLNDLAGLFHSYYNKYK-------VISDDEAMTRTRLFLVKCIQTV 546

Query: 570 INSGLNIIGVESPNEM 585
           + + L ++GV +P +M
Sbjct: 547 LKNALTLLGVSAPEKM 562


>gi|229087850|ref|ZP_04219963.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695457|gb|EEL48329.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 556

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 201/555 (36%), Positives = 319/555 (57%), Gaps = 32/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           +V+E P+D  HG  STN AM L+R     P  IAE ++A   K    ++ + IAG GFIN
Sbjct: 33  VVLESPKDKTHGDFSTNMAMQLARVAKKAPRMIAEELIANFDKAKASIEKIEIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +H+GH R A VGDTL
Sbjct: 93  FYMDNSYLTDLIPAIVKAGEAYGETNTGKGEKVQIEFVSANPTGDLHLGHARGAAVGDTL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   D ++PE  Y G  +  +G
Sbjct: 153 CNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEMPEDGYHGADIIGIG 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + LA+++        E++     ++Y ++  +  ++ DL++  ++ D++ SE   ++   
Sbjct: 212 QRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKFDVWFSETSLYKN-- 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   +  L  +  ++E                +     FRS   GDD +R L+K+DGS
Sbjct: 270 GKIDAALAVLKERDEIFE----------------EDGATWFRSMTYGDDKNRVLIKNDGS 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+   K  + V + ++V+
Sbjct: 314 YTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQ 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY++G  +KMSKR G  +TLR +++EVG D++R+    R +   LDFD      +S ENP
Sbjct: 374 LYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSSDSHLDFDMDLAVSKSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y QYA+AR  SI RQ +++      D+  + V  ++      E++L+  L E+P V+ 
Sbjct: 434 VYYAQYAHARVCSILRQGEELGLTAGGDVNYKLVASEK------EVELLKKLGEFPAVVA 487

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   + P+++  Y ++LA+  H  ++        + +  +N +L+  R  L+ AV   +
Sbjct: 488 DAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELSKARYDLMRAVRITL 541

Query: 571 NSGLNIIGVESPNEM 585
            + L ++GV +P +M
Sbjct: 542 QNALALVGVSAPEKM 556


>gi|229014529|ref|ZP_04171646.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228746749|gb|EEL96635.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 556

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 325/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEDLVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  +  
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVNF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|163943048|ref|YP_001647932.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163865245|gb|ABY46304.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 556

 Score =  366 bits (939), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 325/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEDLVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL +  +  
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L ++  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKQRDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229065010|ref|ZP_04200308.1| Arginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716311|gb|EEL68023.1| Arginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 556

 Score =  365 bits (938), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 324/569 (56%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL +  +  
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229170069|ref|ZP_04297760.1| Arginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613416|gb|EEK70550.1| Arginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 556

 Score =  365 bits (938), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 324/569 (56%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL +  +  
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|304407316|ref|ZP_07388969.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343757|gb|EFM09598.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 558

 Score =  365 bits (938), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 206/565 (36%), Positives = 319/565 (56%), Gaps = 39/565 (6%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIA 84
           ++ L   V+E PRD +HG L+TNAAM L++    +P  IAE I+A +      ++S  IA
Sbjct: 28  REELPAFVLEVPRDKSHGDLATNAAMQLTKLAKRNPRQIAEAIIANLDTASASIESAEIA 87

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN  L+ SYL  +++ ++ +G  YGR   G G +V +EFVSANPTG +H+GH R A
Sbjct: 88  GPGFINFRLNKSYLYPVVTEVLAAGENYGRVNAGAGKRVEVEFVSANPTGSLHLGHARGA 147

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VGD L +++ F+G+EVTREYYINDAG Q+  LA S+  RY+QAL   ++ +PE  Y G 
Sbjct: 148 AVGDALCNVLDFAGHEVTREYYINDAGKQVENLAFSIEARYKQAL-GQEAVMPEDGYHGA 206

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +    +ELA +    LL+ P+++     + Y ++  +  I+ DL    +  D++ SE  
Sbjct: 207 DIVGFAQELAAQEGDRLLSLPDDERFIFFRQYGLERELDKIKRDLGRFRVGFDLWYSETS 266

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +  +   +   +D L   G+VYE                +       +   GDD +R L
Sbjct: 267 LY--EQGLVEQGLDALRATGHVYE----------------EEGATWLNTMQFGDDKNRVL 308

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +K+DGSYTY   D+AY + KY RG+D +I + G+DH GY+ R++A   A+     ++ VL
Sbjct: 309 VKNDGSYTYLTPDIAYHRVKYGRGYDRLINIWGADHHGYIPRMKAAMEALGNDPGKLTVL 368

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++V L+++G  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD      
Sbjct: 369 IAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAVS 428

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTSELQLIV 500
            S ENPVFYVQYA+AR  SIFRQA++    +    + DL   + +  E E+D     L+ 
Sbjct: 429 TSNENPVFYVQYAHARICSIFRQAEEQGIAMRSLSEIDL---SRLVTEQEYD-----LLR 480

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L E P+ I +A     P++L  Y+Y+LA+ FH ++   R       V  ++ + T  RL
Sbjct: 481 KLGELPQEITDAAEQYAPHRLIRYVYELAAQFHSYYKAER-------VMTDDAEQTQARL 533

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+ +   +I + L ++GV +P  M
Sbjct: 534 ALLASTRIVIANVLKLVGVTAPERM 558


>gi|89897692|ref|YP_521179.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670842|ref|YP_002461277.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997116|sp|Q24MK7|SYR_DESHY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782959|sp|B8FZ89|SYR_DESHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89337140|dbj|BAE86735.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541102|gb|ACL22841.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 561

 Score =  365 bits (938), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 206/558 (36%), Positives = 320/558 (57%), Gaps = 38/558 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINL 91
           V+E PR+  HG  +TN AM+L++     P  IA +++  +  +   + +  IAG GFIN 
Sbjct: 37  VLEEPREKQHGDWATNLAMVLTKQARKAPRDIATILIKHLDTEGTFITASEIAGPGFINF 96

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P++L  ++  ++    +YG+  +G+G KV +EFVSANPTG +H+G+ R A +GD+LA
Sbjct: 97  RLDPNWLTGVIPEVLNLEADYGKVNLGQGKKVQVEFVSANPTGLLHMGNARGAALGDSLA 156

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+A +GYEV+RE+YINDAG QI   ALS+  RY Q L   D   PEG Y G  L    K
Sbjct: 157 ALLAMAGYEVSREFYINDAGNQIYNFALSLEARYLQ-LMGQDVPFPEGGYHGEDLIDTVK 215

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L +K  ++ LN  ++     +  Y+++  +  IR+ L  + + +D + SE   H  D  
Sbjct: 216 GLIEKVGNKYLNVDQDLRREFLVRYALEEKLTSIRETLTDMGVHYDCWFSEQSLH--DSG 273

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++D ++ L +QGY+YE                +  Q L +ST+ GD+ D  +++ +G+ 
Sbjct: 274 FVKDTMEKLEQQGYIYE---------------KEGAQWL-KSTLFGDEKDEVVVRGNGTP 317

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFAAD+AY + K+ERGFD +I + G+DH G+V R++   +A+      + ++L +LVRL
Sbjct: 318 TYFAADIAYHRNKFERGFDRVINIWGADHHGHVARMKGAMSALGYDPENLQIILMQLVRL 377

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            ++G  ++MSKR+G +ITLR ++DEVG D+ RF  + R     ++FD    K +S +NPV
Sbjct: 378 IQNGEVVRMSKRSGQYITLRELMDEVGKDAARFFFIMRDPDSTVEFDLDLAKAESSDNPV 437

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPR 507
           +YVQYA+AR  SI RQA +         +    IPQE E        E +L+  +AE P 
Sbjct: 438 YYVQYAHARLCSILRQAAE-------QGYNTAGIPQEGELKRLQSNEERELLKKIAELPN 490

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            IE A    EP++LA Y+ DLA +FH  ++  R       V  +   L   RL LV +  
Sbjct: 491 EIEVAARLTEPHRLARYVLDLAGLFHSFYNSQR-------VLVDEEGLREARLGLVRSTK 543

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ + L I+GV +P  M
Sbjct: 544 QVLANVLGILGVTAPERM 561


>gi|228988590|ref|ZP_04148676.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771041|gb|EEM19521.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 556

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 203/569 (35%), Positives = 327/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GK  KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKREKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229034001|ref|ZP_04188951.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728309|gb|EEL79335.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 556

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 326/569 (57%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  +G  STN AM L+R     P  IAE +VA   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    GKG KV IEFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++         E+     + Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGKLLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + V  ++      E+
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV + + + L I+GV +P +M
Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|152977542|ref|YP_001377059.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026294|gb|ABS24064.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 556

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 200/569 (35%), Positives = 323/569 (56%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +++E P+D  HG  STN AM L+R     P  IAE ++    K   
Sbjct: 20  LKAELATEEQIPN-VILETPKDKTHGDFSTNMAMQLARVAKKAPRMIAEELITNFNKEKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN ++  SYL  ++ +IV +G  YG    GKG K+ +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFHMDNSYLTDLIPTIVKAGEAYGETNTGKGEKIQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +GK LA+++    +   E++     + Y ++  +  ++ DL +  ++ 
Sbjct: 198 PEDGYHGADIMEIGKRLAEEFGDRYVKADEKESYEFYRQYGLKYELAKLQKDLDSFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRST  
Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERNEIFE----------------EGGATWFRSTAY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR L+K DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKDRVLIKKDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 EKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + ++  E E D    
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLHAGGDVNYK-LVASEKEID---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+P  +  A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 475 -LLKKLGEFPAAVAEAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +L+ AV   + + L ++GV +P +M
Sbjct: 528 KARYELMKAVRITLQNALALVGVSAPEKM 556


>gi|194016224|ref|ZP_03054838.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011697|gb|EDW21265.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 557

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 212/589 (35%), Positives = 332/589 (56%), Gaps = 42/589 (7%)

Query: 6   DFSSRLKNYLKE------IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE      +   +  E ++ D +++E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQVKDALKEEIIAAVVKAGLADESQVPD-VLLEVPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV A  K    ++ + IAG GFIN+Y++  YL K++ +++ +   YG    G
Sbjct: 61  APRQIAEDIVKAFDKGKASIEKLDIAGPGFINIYMNNQYLTKLIPAVLEAKEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +G+EV+REYYINDAG QIN LA
Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFEVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   + ++PE  Y G  +K +G++LAD++    ++ PEE+ +   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHEPEEERMKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   +  +   I   ++ L  +GYV+E          
Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLRAKGYVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +      RST  GDD DR L+K DGS+TY   D+AY K K +RGFD +I + G+
Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     ++ V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLD 476
            D+ R+    R  +  +DFD       S ENPV+Y QYA+AR  S+ RQ   K   P+L+
Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F    I  E E+D     L+  +  +P V+  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 KADFSH--IQSEKEYD-----LLKIIGSFPEVVAEAAEKRIPHRVTNYIYDLASALHSFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N   T  RL L+ A    + + L +IGV +P +M
Sbjct: 515 NAE------KVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557


>gi|253577362|ref|ZP_04854679.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843262|gb|EES71293.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 559

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 210/559 (37%), Positives = 312/559 (55%), Gaps = 39/559 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           IV+E P+D AHG  +TNAAM LSR    +P  IAE I+ ++      ++   +AG GFIN
Sbjct: 35  IVLEVPKDKAHGDFATNAAMQLSRIAKKNPRQIAEEILGQLDYGKAGIEKAEVAGPGFIN 94

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             LS SYL  IL  +   G  YGR  +G G KV +EFVSANPTG +H+GH R A VGD L
Sbjct: 95  FTLSKSYLYPILLQVYREGENYGRTTLGNGKKVQVEFVSANPTGSLHLGHARGAAVGDAL 154

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++ F GY+VTREYYINDAG QI  L  S+  RY+Q L   D ++PE  Y G  +K   
Sbjct: 155 CNVLDFVGYDVTREYYINDAGNQIVNLIKSIEARYRQEL-GQDVEMPEDGYHGEDIKGFA 213

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KEL  +   +LL  PEE+    ++ + ++  +  I+ DL+   ++ D++ SE   ++   
Sbjct: 214 KELVAEQGDKLLGMPEEERTAFLRKFGLEKELSKIQRDLERFRVRFDVWFSETSLYQ--D 271

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +  L  +G  YE                       ++T  GDD DR L+K+DG+
Sbjct: 272 GQVEASLSELREKGQTYE----------------QDGATWLKTTAYGDDKDRVLVKNDGT 315

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+AY + KY+RGFD +I + G+DH GY+ R++A   A+ +   ++ VL+ ++V 
Sbjct: 316 YTYLTPDIAYHRNKYDRGFDRIINIWGADHHGYIPRVKAAMQAIGKDPEKLTVLIAQMVS 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L++DG  +KMSKR G  +T+  ++DEVG D +R+    R     LDFD       S ENP
Sbjct: 376 LFQDGEKVKMSKRTGKAVTMVDLMDEVGVDPIRYFFTMRSMDSHLDFDMDLAISTSNENP 435

Query: 451 VFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+YVQYA+AR  SIFRQA++    I    + +L   + +  E E+D     L+  L E P
Sbjct: 436 VYYVQYAHARICSIFRQAEEQGIQIPAAENVNL---SKLTAEHEYD-----LLRKLGELP 487

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I  A     P++L  Y+Y+LA++FH ++       R   V   + +    RL L+  V
Sbjct: 488 EEINVAAENYAPHRLVRYVYELAALFHSYY-------RAERVITEDAEQAAARLVLLGGV 540

Query: 567 ASIINSGLNIIGVESPNEM 585
            +++ + L +IGV +P +M
Sbjct: 541 RTVLANVLRLIGVSAPEKM 559


>gi|167757354|ref|ZP_02429481.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402]
 gi|167703529|gb|EDS18108.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402]
          Length = 554

 Score =  363 bits (933), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 208/589 (35%), Positives = 333/589 (56%), Gaps = 39/589 (6%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M       + LK  LK+  I C   VE+   + I IE P+D +HG  STN AM L++ L 
Sbjct: 1   MMAINKIEATLKGALKQAIIACGF-VEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            +P  IAE I+  + K + +++ V IAG GFINL+L+   +  I+  ++     YG    
Sbjct: 60  RNPRQIAEAIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTY 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G+GTK N+EFVSANPTG +H+GH + A VGD++  +M+ +GY+VTREYYINDAG QI+ L
Sbjct: 120 GQGTKYNVEFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           ALS++ RY+QA +  D  +PE  Y G  +  +  ++ +    + L   E K +   ++  
Sbjct: 180 ALSLYARYKQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +  ++ I+D L    +  D++ SE   +  D   +   I+ L   GY YE         
Sbjct: 239 TEYELQKIKDILNEFRVSFDVWFSETSLYENDR--VVPTIEKLKAAGYTYE--------- 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  +   L F+ST  GDD DR L+KSDGSYTY   D+AY   K +RG++ ++ ++G
Sbjct: 288 -------EEGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+     Q+N+ + ++VR+  +G P+KMSKR G+ +T++ +++E+
Sbjct: 341 ADHHGYINRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEI 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+  + +  +   DFD    K +S ENPV+Y QYA+AR  SI  QA     ++D+
Sbjct: 401 GVDATRYFFVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSIKAQAAK--ANIDY 458

Query: 478 -DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D +   V P+       E++L+ H+ E+  VI ++ I + P+K+  Y+  LA +FH  +
Sbjct: 459 SDKYDLLVNPK-------EIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFY 511

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +  +N +L+  RL LV A    + + LN+IGV +P +M
Sbjct: 512 N------ECYVIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 554


>gi|289523473|ref|ZP_06440327.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503165|gb|EFD24329.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 558

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 208/562 (37%), Positives = 320/562 (56%), Gaps = 44/562 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I+IERPR    G  +TN AM+++R   + P  IA++I++ +K    V+ V +AG GFIN 
Sbjct: 33  IIIERPRRENQGDYATNVAMLMARNWEMKPRDIAQVIISHLKKSEYVEKVEVAGPGFINF 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LS  ++ +++  I+  G +YG+  +G+G +  +EFVSANPTGP+H+GH R A VGD +A
Sbjct: 93  FLSDLWMSELIREIIDKGEDYGKRDLGEGKRAQVEFVSANPTGPLHIGHGRGAAVGDVMA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD-LPEGYYPGVYLKHVG 210
           ++++F+G+ V REYYINDAG Q+  L  SV  RY + L  +++   PE  Y G Y+  + 
Sbjct: 153 NILSFAGWYVEREYYINDAGLQMKLLGRSVQARYFELLGRSEAAPFPEDGYKGDYIHEIA 212

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +E+ D    + L  P E+ L   KDY+V+ ++  I+ DL+   +  D++ SE   H  + 
Sbjct: 213 QEIIDIEGDKFLGLPIEETLDYFKDYAVKVILNGIKKDLEDFRVLFDVWFSEKTLH--ER 270

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             IR+++D L ++G  YE                    + +RST  GD+ DR L++S+G 
Sbjct: 271 GLIREMVDFLMKRGLAYE----------------KEGAIWYRSTKFGDEKDRVLIRSNGE 314

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY K K++RGFD +I V G+DH GYV R++A   A+      + VLL + V 
Sbjct: 315 PTYFASDVAYHKDKFDRGFDLVIDVWGADHHGYVPRMKAAVQALGRSPDDLQVLLIQFVS 374

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L + G  + MS RAG+F+TLR ++DEVG D++R+  L RK    LDFD    K  S +NP
Sbjct: 375 LIKQGRMVSMSTRAGEFVTLREMMDEVGVDAMRYFFLMRKCDSHLDFDIDLAKSASTDNP 434

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQ------LIVHLA 503
           V+YVQYA AR  SIF++A             R + +P   + D S L+      LI  L 
Sbjct: 435 VYYVQYASARLHSIFKEAS-----------SRGIELPAPEKVDISLLKTEEEKALIKCLG 483

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P  +  A     P+ + FY Y+LA  FH  ++  R       V    + L+  RL LV
Sbjct: 484 KFPEEVAKAAKELSPHLIVFYAYELAKAFHSFYNAHR-------VLGEEKSLSDARLILV 536

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++ + L ++ + +P  M
Sbjct: 537 RAVQVVLLNVLGLLKINAPEVM 558


>gi|258513416|ref|YP_003189638.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777121|gb|ACV61015.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 570

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 203/573 (35%), Positives = 326/573 (56%), Gaps = 52/573 (9%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA----RIKIDPD------V 78
           L   V+E PR+  HG  ++N AM+L++P  + P  IAE+ V      IK D        +
Sbjct: 34  LPEFVVEVPREKGHGDFASNLAMMLAKPARMAPRRIAEIFVEHLNEEIKSDKQDGSFILL 93

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           D V +AG GFIN YL+P+++ + L  I   G +YGR ++G G KV +EFVSANPTG +H+
Sbjct: 94  DRVEVAGPGFINFYLNPAWVYETLRIIETEGNDYGRVMLGSGKKVQVEFVSANPTGLLHM 153

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           G+ R A +GD LASL+ F+GY+VTRE+Y+NDAG QI    L++  RY Q L   D  +PE
Sbjct: 154 GNARGAALGDCLASLLDFAGYQVTREFYVNDAGNQIENFGLTLEARYLQ-LLGQDCPVPE 212

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y G+ +    +   DKY ++ L+ P +    ++ +Y+++  ++ IR+ L    +++D+
Sbjct: 213 DGYHGLDIIQTMQGFVDKYGNKFLSAPGKVRRMVMINYALEEKLREIRNTLFDFGVRYDV 272

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           + SE D H  +   + + +  L  +G++YE                    L F++T  G 
Sbjct: 273 WFSEKDLH--ESGAVNEAVAILKEKGHIYE----------------KEGALWFKATEFGV 314

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           + D  +++S+G  TYFAAD+AY K K++RGFD +I + G+DH G+V R++    A+    
Sbjct: 315 EKDEVVVRSNGVPTYFAADIAYHKNKFDRGFDRVINIWGADHHGHVSRVKGAVEAIGYDP 374

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
             ++++L +LVRL+R    ++MSKR G F+TL  +++EVG D  R+  + R     LDFD
Sbjct: 375 ESLDIILMQLVRLFRGTEIVRMSKRTGQFVTLDELIEEVGRDVARYFFVMRSADSHLDFD 434

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---- 494
               K QS ENPV+Y+QYA+AR  SI RQ  +              +PQ    D +    
Sbjct: 435 LELAKSQSNENPVYYIQYAHARICSILRQLDE----------QGGRLPQAGAVDLALLKE 484

Query: 495 --ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             EL LI  +A++P  I +A  +  P++LA Y+++LA + H  ++  R       V  ++
Sbjct: 485 EIELDLIRKMADFPEEIASAAESLAPHRLARYVHELAGLLHSFYNSHR-------VIVDD 537

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L+  RL LV +V ++I + L+++G+ +P +M
Sbjct: 538 AALSEARLVLVMSVKTVIKNALSLLGIAAPEKM 570


>gi|237735571|ref|ZP_04566052.1| arginyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229381316|gb|EEO31407.1| arginyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 553

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 207/581 (35%), Positives = 332/581 (57%), Gaps = 39/581 (6%)

Query: 9   SRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           + LK  LK+  I C   VE+   + I IE P+D +HG  STN AM L++ L  +P  IAE
Sbjct: 8   ATLKGALKQAIIACGF-VEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLKRNPRQIAE 66

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I+  + K + +++ V IAG GFINL+L+   +  I+  ++     YG    G+GTK N+
Sbjct: 67  AIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTYGQGTKYNV 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTG +H+GH + A VGD++  +M+ +GY+VTREYYINDAG QI+ LALS++ RY
Sbjct: 127 EFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNLALSLYARY 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +QA +  D  +PE  Y G  +  +  ++ +    + L   E K +   ++   +  ++ I
Sbjct: 187 KQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKGTEYELQKI 245

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +D L    +  D++ SE   +  D   +   I+ L   GY YE                +
Sbjct: 246 KDILNEFRVSFDVWFSETSLYENDR--VVPTIEKLKAAGYTYE----------------E 287

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L F+ST  GDD DR L+KSDGSYTY   D+AY   K +RG++ ++ ++G+DH GY+ 
Sbjct: 288 EGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYIN 347

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   A+     Q+N+ + ++VR+  +G P+KMSKR G+ +T++ +++E+G D+ R+ 
Sbjct: 348 RMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRYF 407

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNV 484
            + +  +   DFD    K +S ENPV+Y QYA+AR  SI  QA     ++D+ D +   V
Sbjct: 408 FVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSIKAQAAK--ANIDYSDKYDLLV 465

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
            P+       E++L+ H+ E+  VI ++ I + P+K+  Y+  LA +FH  ++       
Sbjct: 466 NPK-------EIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFYN------E 512

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  +N +L+  RL LV A    + + LN+IGV +P +M
Sbjct: 513 CYVIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 553


>gi|328952027|ref|YP_004369361.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452351|gb|AEB08180.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 556

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 204/556 (36%), Positives = 315/556 (56%), Gaps = 37/556 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLY 92
           ++ P+   HG  +TNAA++L++ +   P  +AELI   +   P  +  V IAG GFIN +
Sbjct: 34  VDVPKLAEHGDFATNAALLLAKSVRRAPRRVAELIRDNLNPPPGMLARVEIAGPGFINFF 93

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  +Y  ++L  I  +G  YG++ +G G  V +EFVSANPTGP+HVGH R A +GD LA+
Sbjct: 94  LEGTYWLQVLDDIASAGGTYGQSTMGAGKSVQVEFVSANPTGPLHVGHGRGAALGDALAN 153

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +++ +G+ V REYYIND G Q+ TL LS+  R ++ L       PE  Y G Y+K + ++
Sbjct: 154 ILSATGHRVEREYYINDIGLQMQTLGLSLLLRVKE-LQGEPVSFPENCYQGDYIKVLARQ 212

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +++    L  P+   L     Y+ +A++  IR DL    +  D + SE    +     
Sbjct: 213 YLEQHGPISLEEPDAAALEAGGRYAGEAILAGIRQDLADFGVHFDHWFSETRLFQ--DHD 270

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +      L  +GY+YE                    L F++T  GD+ DR + + +G+ T
Sbjct: 271 LDHAFAALQERGYLYEA----------------DGALWFKATAFGDEKDRVVRRQNGATT 314

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+ Y   K++RGF  +I + G+DH GYV RL+AV  A+     ++ +LL +LV L 
Sbjct: 315 YFASDIGYHWQKFQRGFHQVIDIWGADHHGYVPRLKAVVQALGIPAERLTILLVQLVSLL 374

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           R+G P+ M+ R G F+TLR V+DEVG D+ RF+ L R+    L+FD    K+QS ENPV+
Sbjct: 375 REGEPVAMTTRGGTFVTLREVMDEVGKDAARFIFLSRRADAHLEFDLELAKQQSNENPVY 434

Query: 453 YVQYAYARCRSIFR--QAKDIFPDLDFDL-FPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           YVQYA+AR  S+FR  Q K +  + D      R  +P+       E+ L+  LA YP V+
Sbjct: 435 YVQYAHARLASVFRLAQEKGLAGEADQSANLTRLTLPE-------EITLLKLLATYPEVV 487

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A    EP+++ ++L +LA   HG++       R RF+ +++  L+  RL+LV  + +I
Sbjct: 488 EAAAFHLEPHRITYFLTELAGQLHGYYY------RHRFI-SDDADLSRARLRLVRGIKTI 540

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++GVE+P  M
Sbjct: 541 LAHGLGLLGVEAPENM 556


>gi|217963335|ref|YP_002349013.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782969|sp|B8DBE8|SYR_LISMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|217332605|gb|ACK38399.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307572087|emb|CAR85266.1| argS [Listeria monocytogenes L99]
          Length = 556

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   DS+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|56965653|ref|YP_177387.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81364951|sp|Q5WB34|SYR_BACSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56911899|dbj|BAD66426.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 556

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 207/557 (37%), Positives = 310/557 (55%), Gaps = 36/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           +++E P+D AHG  +TN AM L+R     P  IAE +VA   +    ++ + IAG GFIN
Sbjct: 33  VLLEAPKDKAHGDFATNIAMQLARIAKKAPRAIAEELVANFDRKQAGIEKIEIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L   YLR+++  ++    +YG + +G+G KV IEFVSANPTG +H+GH R A VGDT+
Sbjct: 93  FFLDNGYLRELIPQVLTEKDDYGSSDVGQGEKVLIEFVSANPTGDLHLGHARGAAVGDTI 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A++M  +GY+V+REYYINDAG QI  LA S+  RY Q L   D  +PE  Y G  +  + 
Sbjct: 153 ANIMDKAGYKVSREYYINDAGNQIENLAASLNARYLQVL-GEDQPMPEDGYHGQDIIDIA 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+L D+   +     E++ L  ++DY ++  ++ I+ DL A  ++ D + SE        
Sbjct: 212 KQLVDEAGDQYRQLDEKERLAFMRDYGLKKELEKIKQDLNAYRVEFDKWFSET------- 264

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                   +L   G V  G+        T + D        RST  GDD DR L+K DG+
Sbjct: 265 --------SLYESGQVERGLQVLKDKNETYEKD---GATWLRSTAYGDDKDRVLVKQDGT 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D++Y   K++RG D +I V+G+DH GY+ R+ A   A+    A+ NV + ++V 
Sbjct: 314 YTYLTPDISYHLDKFDRGHDRLIDVLGADHHGYIPRMRAAIQALGYDPARFNVQIIQMVS 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L++ G  +KMSKR G  +TLR +++EVG D+ R+    R     LDFD      +S ENP
Sbjct: 374 LFQGGEKVKMSKRTGKAVTLRELMEEVGVDATRYFFAMRSPDTHLDFDMDLAVSKSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDI-FP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           V+Y+QYA+AR  SI RQ +++  P   + DL P   I  E E+     +L+  + E+P  
Sbjct: 434 VYYIQYAHARVCSILRQGEELGIPYSANTDLSP---IASEKEY-----ELLKAIGEFPGA 485

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   Q P ++A Y YDLA   H  ++        R +   N+ L+  RL L+ A   
Sbjct: 486 VAEAATKQIPQRIANYAYDLAQALHSFYN------VTRVIDTENKDLSAARLALMKATQM 539

Query: 569 IINSGLNIIGVESPNEM 585
            I + L ++GVE+P +M
Sbjct: 540 TIKNALALLGVEAPEKM 556


>gi|228994078|ref|ZP_04153978.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|229000147|ref|ZP_04159716.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229007668|ref|ZP_04165260.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753536|gb|EEM02982.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228759479|gb|EEM08456.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228765530|gb|EEM14184.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 556

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 322/569 (56%), Gaps = 33/569 (5%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76
           +  ++  E++I + +V+E P+D  HG  STN AM L+R     P  IAE ++A   K   
Sbjct: 20  LKAELATEEQIPN-VVLESPKDKTHGDFSTNMAMQLARVAKKAPRMIAEELIANFDKAKA 78

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            ++ + IAG GFIN Y+  SYL  ++  IV +G  YG    GKG KV +EFVSANPTG +
Sbjct: 79  SIEKIEIAGPGFINFYMDNSYLTDLIPVIVTAGTNYGETNTGKGEKVQVEFVSANPTGDL 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV  RY QAL   + ++
Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE  Y G  +  +G+ LA+++        E++     ++Y ++  +  ++ DL++  ++ 
Sbjct: 198 PEDGYHGADIIGIGQRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I   +  L  +  ++E                +     FRS   
Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+DH GY+ R++A   A+  
Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG D++R+    R     LD
Sbjct: 360 DKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y QYA+AR  SI RQ +++      D+  + ++  E E D    
Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLTAGGDINYK-LVASEKEVD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+P  +  A   + P+++  Y ++LA+  H  ++        + +  +N +L+
Sbjct: 475 -LLKKLGEFPAAVAEAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNPDNLELS 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  L+ AV   + + L ++GV +P +M
Sbjct: 528 KARYDLMRAVRITLQNALALVGVSAPEKM 556


>gi|46908732|ref|YP_015121.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|254826340|ref|ZP_05231341.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854387|ref|ZP_05243735.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255519904|ref|ZP_05387141.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300766060|ref|ZP_07076028.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461793|sp|Q71WL8|SYR_LISMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46882004|gb|AAT05298.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|258607786|gb|EEW20394.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293595581|gb|EFG03342.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300513206|gb|EFK40285.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 556

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   DS+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|323490872|ref|ZP_08096070.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395480|gb|EGA88328.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 553

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 196/555 (35%), Positives = 318/555 (57%), Gaps = 33/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           + +E PRD  +G  +TN AM L+R     P  IAE IVA +  D  ++ +V IAG GFIN
Sbjct: 31  VQLESPRDKTNGDYATNIAMQLTRLAKKPPRAIAEAIVANLDKDAANIQTVDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + +   YL+ ++ +++   ++YGR+  G   ++ +EFVSANPTG +H+GH R + VGD+L
Sbjct: 91  ITIKKDYLQDVVKTVLEQKVDYGRSTAGDNERIQVEFVSANPTGDLHLGHARGSSVGDSL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY+V+REYYINDAG QIN LALS+  RY +AL   DS +PE  Y G  +K + 
Sbjct: 151 CNILDLAGYDVSREYYINDAGNQINNLALSIEARYFEALGKGDS-MPEDGYRGQDIKDIA 209

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + L  ++  + ++   E+     +++ ++  +  ++ DL    ++ D++  E   ++   
Sbjct: 210 EALVQEHGDKFVSMTHEERFETFREHGLKVELAKLQQDLADFRVEFDVWYPESSLYKN-- 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I + +  L   G+VYE                +     FRST  GDD DR L+K+DGS
Sbjct: 268 GKIDEALAKLRENGHVYE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+AY + K +RGF  +I V G+DH GY+ R++A   A+   +  + V + ++V+
Sbjct: 312 YTYLMPDIAYHEDKLQRGFGKLINVWGADHHGYIPRMKAAIEALGYDRDTLEVSIIQMVQ 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY+DG  +KMSKR G  +T+R +V+ VG D+VR+    R     +DFD      QS ENP
Sbjct: 372 LYKDGEKMKMSKRTGKAVTMRELVELVGLDAVRYFFAMRSGDSHMDFDLDLAVSQSNENP 431

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y QY +AR  SI RQA++    L       N++  E E D     ++  + ++P+VI 
Sbjct: 432 VYYSQYGHARISSILRQAEE--QGLLASEEHLNLLTSEKEID-----VLKKIGDFPQVIA 484

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   + P+++  Y+ +LAS FH  ++        + + A+N ++T  RL L+ AV + +
Sbjct: 485 DAAKQRAPHRITTYIQELASNFHSFYNAN------KVLDASNVEMTSARLALITAVKTTL 538

Query: 571 NSGLNIIGVESPNEM 585
            + L  +GVE+P +M
Sbjct: 539 ANALKTVGVEAPEKM 553


>gi|254993097|ref|ZP_05275287.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 556

 Score =  362 bits (930), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 313/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   DS+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   +             R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFXXXXXXXXXXXXRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|290892723|ref|ZP_06555715.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290557783|gb|EFD91305.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 556

 Score =  362 bits (930), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   DS+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|47093569|ref|ZP_00231328.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226225108|ref|YP_002759215.1| arginyl tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511650|sp|C1KYX7|SYR_LISMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|47018040|gb|EAL08814.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225877570|emb|CAS06284.1| arginyl tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328465162|gb|EGF36430.1| arginyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 556

 Score =  362 bits (930), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   DS+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|254932197|ref|ZP_05265556.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583753|gb|EFF95785.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328471050|gb|EGF41959.1| arginyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332312990|gb|EGJ26085.1| Arginyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 556

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   DS+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|289435829|ref|YP_003465701.1| hypothetical protein lse_2468 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172073|emb|CBH28619.1| argS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 556

 Score =  362 bits (929), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 212/569 (37%), Positives = 316/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E   +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+     YG++  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +GY V+REYYINDAG QIN L LS   RY +AL   ++D PE  
Sbjct: 143 ARGAAIGDSLANIMTMAGYNVSREYYINDAGNQINNLVLSAEARYFEAL-GLEADFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDALDFETDKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    D+  + D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKEADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A + + P+++  YL DLA+ FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|16801767|ref|NP_472035.1| arginyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|21542253|sp|Q927T2|SYR_LISIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|16415242|emb|CAC97932.1| arginyl tRNA synthetase [Listeria innocua Clip11262]
          Length = 556

 Score =  362 bits (929), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 210/565 (37%), Positives = 319/565 (56%), Gaps = 32/565 (5%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDTKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   +S+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + +N  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
             K  S +NPV+YVQYA+AR  SI R  K+   ++  D    +++  E+E+D     L+ 
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKDA-NMSLLETEAEYD-----LLK 477

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L E+  V+  A + + P+++  YL DLA+ FH  ++        + +  +N ++T  RL
Sbjct: 478 VLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTKARL 531

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+      + +GL ++GV +P +M
Sbjct: 532 ALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|116873927|ref|YP_850708.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461434|sp|A0ALP7|SYR_LISW6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116742805|emb|CAK21929.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 556

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 211/559 (37%), Positives = 313/559 (55%), Gaps = 40/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  V IAG GFIN
Sbjct: 33  ILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKEVEIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL  +YL +++  I+    +YG +  GKG K  IEFVSANPTG +H+GH R A +GD+L
Sbjct: 93  FYLDNAYLTELVPVILTEDHKYGESDFGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A++M  +G++V+REYYINDAG QIN L LS   RY +AL   +S+ PE  Y G  +  +G
Sbjct: 153 ANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDGYRGADIISLG 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA KY  + +N  EE+   + +  ++      +R DL+   +  D + SE   +  + 
Sbjct: 212 KDLAAKYGDKYVNTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWFSETSLY--EE 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +   ++ L   GY+YE                D    L R+T   DD DR L+KSDGS
Sbjct: 270 NKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDKDRVLIKSDGS 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q+ V + +LV 
Sbjct: 314 YTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVH 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD    K  S +NP
Sbjct: 374 LFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNP 433

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D     L+  L E+ 
Sbjct: 434 VYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD-----LLKVLGEFA 483

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+  A   + P+++  YL DLA+ FH  ++        + +  +N ++T  RL L+   
Sbjct: 484 DVVAEAAAKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTQARLSLIKTA 537

Query: 567 ASIINSGLNIIGVESPNEM 585
              + +GL ++GV +P +M
Sbjct: 538 QITLRNGLTLLGVSAPEKM 556


>gi|16804599|ref|NP_466084.1| arginyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47097104|ref|ZP_00234673.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224500484|ref|ZP_03668833.1| arginyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503648|ref|ZP_03671955.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829538|ref|ZP_05234225.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254900987|ref|ZP_05260911.1| arginyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913799|ref|ZP_05263811.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938188|ref|ZP_05269885.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255025720|ref|ZP_05297706.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|284802999|ref|YP_003414864.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996140|ref|YP_003417908.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|21542250|sp|Q8Y493|SYR_LISMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|16412049|emb|CAD00639.1| arginyl tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47014509|gb|EAL05473.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258601953|gb|EEW15278.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610800|gb|EEW23408.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284058561|gb|ADB69502.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061607|gb|ADB72546.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293591816|gb|EFG00151.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 556

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   +S+ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   I +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSIFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|225848845|ref|YP_002729009.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643540|gb|ACN98590.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 552

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 208/557 (37%), Positives = 325/557 (58%), Gaps = 36/557 (6%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +I D+I +E P++ + G L+TN A +L++ L   P  IAE I + ++ DP    V +   
Sbjct: 22  EIEDKIKVEPPKEESFGDLATNVAFLLTKHLKQKPQDIAEKIKSLLEKDPTFSKVEVLN- 80

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFINL+LS SY   ++   V  G  +G N      K+NIE+VSANPTGP+H+GH R AVV
Sbjct: 81  GFINLFLSDSYYHSVVKKAVEEGDSFGENKEKNRGKINIEYVSANPTGPLHLGHGRGAVV 140

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G+ L+++ ++ GY+V RE+YINDAG QI  L  SV+ R++Q +   D   PE  Y G Y+
Sbjct: 141 GNLLSNMYSYIGYKVEREFYINDAGNQIKKLGQSVYARFRQ-IEEPDFPFPEDGYHGEYI 199

Query: 207 KHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           K + KE+      ++L+   EE  +    +Y+   ++  I++DLK +N+  DI+ SE   
Sbjct: 200 KDIAKEIYHYEREKILSMLSEEDAVEFCAEYAKNYLLDKIKEDLKLINVDFDIWTSEKSL 259

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           ++     +   +  L  +G +YE                    L  ++++ GD+ DR + 
Sbjct: 260 YQH--GKVDQALKFLEEKGMIYE----------------KDGALWLKTSLYGDEKDRVIK 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           KSDGSYTYFAAD+AY   KYERG+D +I V G+DH GY  RL+A   A   ++  INV+ 
Sbjct: 302 KSDGSYTYFAADIAYHYDKYERGYDFIINVWGADHHGYFPRLKAAVMAFGVREDWINVVF 361

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +LV+L+++G  +KMSKR+GDFITLR +V+EVG D+V +    +  +  L+FD      +
Sbjct: 362 IQLVKLFKNGEEVKMSKRSGDFITLRELVEEVGKDAVIYFFASKDPNTHLNFDIDVALAK 421

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           S ENPV+YVQYA+AR  S+FR+AK+ F   P+ DF+    +++ QE      E  ++  L
Sbjct: 422 SNENPVYYVQYAHARISSVFREAKERFNFDPEKDFEA-DLSLLTQE-----EEKSIMKFL 475

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +  P+ IE AT+ +EP+K+    Y+LAS  H ++         +F+   + KL   RL L
Sbjct: 476 SNLPQEIEEATLKKEPHKITSLTYELASKLHKYYYQH------KFLIETDEKLMKARLYL 529

Query: 563 VHAVASIINSGLNIIGV 579
           + A+ + + +   ++G+
Sbjct: 530 LKAIRNALRTLFKLMGI 546


>gi|224370238|ref|YP_002604402.1| arginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|259511641|sp|C0QKZ8|SYR_DESAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|223692955|gb|ACN16238.1| ArgS [Desulfobacterium autotrophicum HRM2]
          Length = 555

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 202/552 (36%), Positives = 310/552 (56%), Gaps = 28/552 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE PR  AHG  STN AM+ +    + P  IAE +++ +  D  ++   IAG GFIN +L
Sbjct: 32  IEAPRHEAHGDFSTNFAMVSAATQKMAPRKIAEAVISCMDSDSVIEKTEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +       L  IV     +G +  G G KV +EFVSANPTGP+HVGH R A VGD +A++
Sbjct: 92  ANRAWYPTLDRIVKEDDRFGSSDFGAGKKVQVEFVSANPTGPLHVGHARGAAVGDAVANI 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           ++F+G++V REYYIND+G QI TL LSV+ R  Q L   + + P   Y G Y+K +  +L
Sbjct: 152 LSFAGFDVQREYYINDSGRQIRTLGLSVWLRLCQQL-GREVEFPTDCYQGDYIKEIAADL 210

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   EL    E + + I   ++ Q ++  IR DL A  +++D + SE+  +      +
Sbjct: 211 HGKMGRELSEKDEAEAVSICAKFAAQVILSGIRADLVAFGVEYDQWFSEESLYA--SGRV 268

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           +  I+    +  +YE                D  Q  FR+   GD+ DR +++++G  TY
Sbjct: 269 QKAIEEFKARDVIYE---------------KDGAQW-FRTERYGDEKDRVVVRNNGITTY 312

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           FA+D+AY   K++RGFD +I V G+DH GY+ R+ A   A   +  Q +V+L +LV L R
Sbjct: 313 FASDIAYHMEKFDRGFDRVIDVWGADHHGYINRINAAIDASGRQSDQFDVILVQLVNLLR 372

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +G P+ MS R+G+F+TL+ +VDEVG D+ RF+ L R     LDFD    K+++ +NPV+Y
Sbjct: 373 NGQPVAMSSRSGEFVTLKDIVDEVGKDAARFLFLSRSYDSGLDFDLEVAKQKTSDNPVYY 432

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY +AR   I  +A  +   +  +        +E   +  E+ L+  LA +P  +E + 
Sbjct: 433 VQYVHARIAGILMKA--VSEKVLNEAEKPGAGNRELLVEPEEINLLKILAAFPETVEKSA 490

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YL  LAS FHG+++  +       V   +R+L+  R+ LV AV ++I +G
Sbjct: 491 ATLHPHVIFTYLMGLASAFHGYYNRHK-------VITPDRELSRGRISLVFAVKTVIRNG 543

Query: 574 LNIIGVESPNEM 585
           LN++GV +P  M
Sbjct: 544 LNLLGVSAPERM 555


>gi|188996539|ref|YP_001930790.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931606|gb|ACD66236.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 553

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 214/560 (38%), Positives = 322/560 (57%), Gaps = 43/560 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + D+I IE P++   G LSTNAA ILS+ L   P  +A  + A  + DP  + V +AG G
Sbjct: 23  VEDKIKIESPKEEKFGDLSTNAAFILSKNLNKKPFEVANQLKALFEKDPYFEKVEVAGGG 82

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL++S ++  +IL+  +    E+G+       K NIE+VSANPTGP+H+GH R AVVG
Sbjct: 83  FINLFISDAFYHQILNKAIEEKDEFGKAKEKNKGKTNIEYVSANPTGPLHLGHGRGAVVG 142

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           + L++L  + GY+V RE+YINDAG QI  L +SV+ R++Q +       PE  Y G Y+K
Sbjct: 143 NILSNLYDYIGYKVEREFYINDAGNQIKKLGMSVYARFRQ-IEEPSYPFPEDGYHGEYIK 201

Query: 208 HVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
            + KEL      ++L+F  EE+ +    +Y+   ++  I+ DLK + ++ DI+ SE   H
Sbjct: 202 DIAKELYHYEREKILSFLDEEEAIEFCAEYAKNFLLDEIKKDLKLIGVEFDIWYSER--H 259

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   +  L  +G +YE                    L  ++++ GD+ DR + K
Sbjct: 260 LYEHGKVEQALKFLESKGLIYE----------------KDGALWLKTSLYGDEKDRVIRK 303

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           SDGSYTYFAAD+AY   KY R +D +I V G+DH GY  RL+A   A   K+  INVL  
Sbjct: 304 SDGSYTYFAADIAYHYDKYLRNYDFIINVWGADHHGYFPRLKAAIMAFGVKEDWINVLFI 363

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +LV+L+ +G  +KMSKR+GDFITLR +V+EVG D+V +    +  +  L+FD     ++S
Sbjct: 364 QLVKLFNNGEEVKMSKRSGDFITLRELVEEVGKDAVIYFFASKDPNTHLNFDIDIALKKS 423

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTS------ELQLI 499
            ENPVFYVQYA+AR  S+FR+A+  F          N  P+E  E D S      E  L+
Sbjct: 424 NENPVFYVQYAHARISSVFREAQQRF----------NFNPEEDFEADLSLLKEDLERSLM 473

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            +++  P  I +ATI  +P+K+    Y+LAS  H ++ +       +F+  N+ KL   R
Sbjct: 474 KYISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH------KFLIENDEKLMKAR 527

Query: 560 LQLVHAVASIINSGLNIIGV 579
           L L+ AV +++ +   I+G+
Sbjct: 528 LYLLKAVRNVLRALFKIMGI 547


>gi|163785199|ref|ZP_02179881.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879532|gb|EDP73354.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 517

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 202/550 (36%), Positives = 320/550 (58%), Gaps = 49/550 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P++   G  S NAA +L++ L   PL IA  I   ++ +   + V +AG GFINL+L
Sbjct: 5   IETPKEEKFGDFSINAAFLLTKYLKKKPLEIANQIKEILEKEDIFEKVEVAGAGFINLFL 64

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S  + +  L   VV G  YG  +     K+N+EFVSANPTGP+H+GH R AVVG+ L+++
Sbjct: 65  STKFFQPFLHKAVVHGDRYGEKINKDKGKINVEFVSANPTGPLHLGHGRGAVVGNALSNI 124

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +++SGYEV +E+YINDAG QI  L  S++ RY+Q +   D   PE  Y G Y+K + K++
Sbjct: 125 LSYSGYEVVKEFYINDAGNQIRKLGESIYARYRQ-IEQPDFPFPEDGYHGNYIKEIAKDI 183

Query: 214 ADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                 ++L F +E    +W+    +Y    ++  I++DLK +N++ DI+ SE + ++  
Sbjct: 184 YYHEREKVLTFLDESQAVEWMA---EYGKNILLDRIKEDLKLINVEFDIWFSEKELYK-- 238

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              ++++I+ L  +G VYE                    L  ++T+ GDD DR L KSDG
Sbjct: 239 TGKVQEVINYLQEKGLVYE----------------KDGALWLKTTLYGDDKDRVLKKSDG 282

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +YTYFA D+AY   K++R +   I + G+DH GY  RL+A   A+   +  + VL  +LV
Sbjct: 283 TYTYFAGDIAYHYDKFKRSYKQAINIWGADHHGYFPRLKAAVMALGASENWLQVLFIQLV 342

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L+++G  +KMSKRAG+FITLR +V EVG+D+V +  L + ++  L+FD     ++S EN
Sbjct: 343 KLFKNGKEVKMSKRAGEFITLRDLVIEVGADAVIYFFLSKDSNTHLNFDIDLATKKSSEN 402

Query: 450 PVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           PVFYVQYA+AR  S+FR+AK+       +  D++ +L            + +E  L+  +
Sbjct: 403 PVFYVQYAHARITSVFREAKEKLGIEANLIEDVNIELLK----------EKAEKDLMKKI 452

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +  P  I N    ++P+K+    YDLAS FH ++++       +F+  N+ +LT  RL L
Sbjct: 453 STIPEDIYNIAEQKQPHKITNLAYDLASKFHYYYNN------YKFLNENDEELTKARLYL 506

Query: 563 VHAVASIINS 572
           + AV + + +
Sbjct: 507 LRAVRNTLRT 516


>gi|313617044|gb|EFR89624.1| arginyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 556

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 209/565 (36%), Positives = 319/565 (56%), Gaps = 32/565 (5%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDSKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   +++ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLEAEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + +N  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
             K  S +NPV+YVQYA+AR  SI R  K+   ++  D    +++  E+E+D     L+ 
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKDA-NMSLLETEAEYD-----LLK 477

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L E+  V+  A + + P+++  YL DLA+ FH  ++        + +  +N ++T  RL
Sbjct: 478 VLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTKARL 531

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+      + +GL ++GV +P +M
Sbjct: 532 ALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|227824820|ref|ZP_03989652.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905319|gb|EEH91237.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 552

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 204/558 (36%), Positives = 308/558 (55%), Gaps = 41/558 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V   P   A G  +TN A+  +R     P  IA+ +V  +     V+ + +AG GF+N 
Sbjct: 32  LVFTVPPQKAFGDFATNFALQAARNFHCPPRVIADAVVKYLDCSA-VEKMEVAGPGFLNF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YL   +L + L+ I+  G  YG      G K+ IEFVSANPTGP+HVGH R A VG +LA
Sbjct: 91  YLKSDWLYEGLARILEKGESYGNLPKKAGEKIQIEFVSANPTGPLHVGHGRGAAVGSSLA 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +LM  +GY+VTREY INDAG Q++ LALSV  RY + L+  +   PE  Y G  +    +
Sbjct: 151 NLMLAAGYDVTREYLINDAGNQMHNLALSVNARYLE-LFGKEVSFPENGYHGEDIIVTAR 209

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + +KY  + L+  E + L   +  +    +  +R+DL+A N + D++ SE   H  D  
Sbjct: 210 RIKEKYGDKFLHMEETERLSAFQTLAKDEKLAALREDLEAFNCKFDVWFSEQSLH--DAG 267

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I++ +D L ++ YVYE                    L FRST  GDD DR +++ +G  
Sbjct: 268 KIKEAVDTLQKKDYVYE----------------KGGALWFRSTKFGDDKDRVVIRDNGVS 311

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFAAD+AY + K++RGFD +I + G+DH GY+ R++A   A+    + + +L+ ++V L
Sbjct: 312 TYFAADIAYHQNKFQRGFDRIINLWGADHHGYITRVKAAMEALGYDPSHLEILILQMVSL 371

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           YR+G  +KMSKR G  +TL  +++EVG+D+ R+  + R     LDFD     E S +NPV
Sbjct: 372 YRNGELVKMSKRTGKAVTLNELIEEVGTDAARYFFIMRSMDSQLDFDLTLATEHSNDNPV 431

Query: 452 FYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +YVQYA+AR  SI +Q ++    + P  D  +    V          E+ LI  L +Y  
Sbjct: 432 YYVQYAHARICSILKQMEEEHIALDPHCDLSVLGEPV----------EIDLIKKLGDYED 481

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++E A   + P+K+A Y+Y+LA +FH  ++  R       V   + KL   RL L+ A  
Sbjct: 482 LVETAAAERAPHKIAHYVYELAGIFHSFYNQCR-------VLGVDPKLQQARLALIMATR 534

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL I+GV +P+ M
Sbjct: 535 HTLRHGLMILGVSAPDHM 552


>gi|254831015|ref|ZP_05235670.1| arginyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 556

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 211/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   +S+ PE  
Sbjct: 143 ARGAAIGDSLANIMNMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + +N  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+K+DGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKTDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    ++  D D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A   + P+++  YL DLA+ FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|315283742|ref|ZP_07871832.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313612612|gb|EFR86664.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 556

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 211/566 (37%), Positives = 320/566 (56%), Gaps = 34/566 (6%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILKEDEKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M+ +G++V+REYYINDAG QIN L LS   RY +AL   +S+ PE  
Sbjct: 143 ARGAAIGDSLANIMSVAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + +N  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLI 499
             K  S +NPV+YVQYA+AR  SI R  K+   DL+  +    +++  E+E+D     L+
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKE--QDLEVTEAADMSLLQTEAEYD-----LL 476

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L E+  V+  A   + P+++  YL DLA+ FH  ++        + +  +N ++T  R
Sbjct: 477 KVLGEFADVVAEAAAKRAPHRIVRYLNDLAAAFHRFYNSN------KVLDMDNLEVTKAR 530

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L+      + +GL ++GV +P +M
Sbjct: 531 LALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|317485261|ref|ZP_07944142.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923552|gb|EFV44757.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 551

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 209/565 (36%), Positives = 324/565 (57%), Gaps = 46/565 (8%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88
           D+ VIE  +D  HG L++N A++ ++  G+ P  +A  +   ++  D  + SV +AG GF
Sbjct: 24  DKAVIEPSKDPKHGDLASNLALVSAKAAGMPPRELAAKMAEALRNEDASLASVEVAGPGF 83

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+  SP + R+ +  I  +   +G+  +GKG KV +E+VSANPTGP+H+GH R A VGD
Sbjct: 84  LNVTFSPEFWRETIRRIDDAADRFGQATVGKGCKVQVEYVSANPTGPLHIGHGRGAAVGD 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TLA ++ F+GY+VT EYYINDAG Q+  L LS++ R ++ L     + PE YY G Y+  
Sbjct: 144 TLARILRFAGYDVTTEYYINDAGRQMRLLGLSIWLRAKE-LAGIAVEWPEDYYRGSYIID 202

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HR 267
           + +E+ DK    L +  + +       Y +Q ++  I++DL+   ++H ++ SE     R
Sbjct: 203 IAREMMDK-DPGLTSLSDAEGQDRCFAYGMQTILDGIKEDLREFRVEHQVWFSERSLVER 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           G    + +  + L + G  +E                    L FR+T  GDD DR L KS
Sbjct: 262 G---AVEETFERLKKAGLSFE----------------KDGALWFRTTDFGDDKDRVLRKS 302

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DGS TYFA+D+AY   KY RGFD ++ V G+DH GYV R++A   AV  K   ++V+L +
Sbjct: 303 DGSLTYFASDIAYHDDKYRRGFDRVVDVWGADHHGYVPRMKAAVQAVGRKAEDLDVVLIQ 362

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV L  +G  + MS RAG F TL  VV EVG D+ RFM L RK+   LDFD   VK++S 
Sbjct: 363 LVNLLENGTQVAMSTRAGQFETLADVVKEVGVDAARFMFLSRKSDSHLDFDLALVKQRSM 422

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-------DTSELQLIV 500
           +NPV+YVQYA+AR RS+ R+A +    L          P++++        +  +L L+ 
Sbjct: 423 DNPVYYVQYAHARVRSVLRKAAEAGLTL----------PEKTDLALLAPLSEAEDLALLH 472

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +  V + A  A  P+ +++YL +LA + H +++   ++P L   QA + +L + RL
Sbjct: 473 FLDRFEDVAKGAAQALAPHHISYYLMELAGMLHSYYA---KHPVL---QAGDPELALARL 526

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+ +V  ++ +GL ++GV +P  M
Sbjct: 527 ALLRSVGQVVKNGLELLGVSAPESM 551


>gi|313622316|gb|EFR92809.1| arginyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 556

 Score =  360 bits (924), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 209/565 (36%), Positives = 319/565 (56%), Gaps = 32/565 (5%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPGLKKDSKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   RY +AL   +++ PE  
Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLEAEFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + +N  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
             K  S +NPV+YVQYA+AR  SI R  K+   ++  D    +++  E+E+D     L+ 
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKDA-NMSLLETEAEYD-----LLK 477

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L E+  V+  A + + P+++  YL DLA+ FH  ++        + +  +N ++T  RL
Sbjct: 478 VLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTKARL 531

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+      + +GL ++GV +P +M
Sbjct: 532 ALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|237755374|ref|ZP_04584002.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692458|gb|EEP61438.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 553

 Score =  360 bits (923), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 213/564 (37%), Positives = 322/564 (57%), Gaps = 43/564 (7%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D+I IE P++   G LSTNAA ILS+ L   P  +A  +    + DP  + V +AG GFI
Sbjct: 25  DKIKIESPKEEKFGDLSTNAAFILSKNLNKKPFEVANQLKELFEKDPYFEKVEVAGGGFI 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL++S ++  +IL+  +    E+G+       K+NIE+VSANPTGP+H+GH R AVVG+ 
Sbjct: 85  NLFISDAFYHQILNKAIEEKDEFGKAKEKNKGKINIEYVSANPTGPLHLGHGRGAVVGNI 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L++L  + GY+V RE+YINDAG QI  L +SV+ R++Q +       PE  Y G Y+K +
Sbjct: 145 LSNLYDYIGYKVEREFYINDAGNQIKKLGMSVYARFRQ-IEEPSYPFPEDGYHGEYIKDI 203

Query: 210 GKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            KE+      ++L+F  EE+ +    +Y+   ++  I+ DLK + ++ DI+ SE   H  
Sbjct: 204 AKEIYHYEREKILSFLDEEEAIEFCAEYAKNFLLDEIKKDLKLIGVEFDIWYSER--HLY 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +   +  L  +G +YE                    L  ++++ GD+ DR + KSD
Sbjct: 262 QHGKVEQALKFLESKGLIYE----------------KDGALWLKTSLYGDEKDRVIRKSD 305

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           GSYTYFAAD+AY   KY R +D +I V G+DH GY  RL+A   A   K+  INVL  +L
Sbjct: 306 GSYTYFAADIAYHYDKYLRNYDFIINVWGADHHGYFPRLKAAIMAFGVKEDWINVLFIQL 365

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G  +KMSKR+GDFITLR +V+EVG D+V +    +  +  L+FD     ++S E
Sbjct: 366 VKLFKNGEEVKMSKRSGDFITLRELVEEVGKDAVIYFFASKDPNTHLNFDIDIALKKSNE 425

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTS------ELQLIVH 501
           NPVFYVQYA+AR  S+FR+A+  F          N  P+E  E D S      E  L+ +
Sbjct: 426 NPVFYVQYAHARISSVFREAQQRF----------NFNPEEDFEADLSLLKEDLERSLMKY 475

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           ++  P  I +ATI  +P+K+    Y+LAS  H ++ +       +F+  N+ KL   RL 
Sbjct: 476 ISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH------KFLIENDEKLMKARLY 529

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+ AV +++ +   I+G+     M
Sbjct: 530 LLKAVRNVLRTLFKIMGITPVERM 553


>gi|254796447|ref|YP_003081283.1| arginyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589683|gb|ACT69045.1| arginyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 570

 Score =  359 bits (922), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 205/548 (37%), Positives = 317/548 (57%), Gaps = 19/548 (3%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRK 100
           +G  ST  + +L++ +GL    +A  I   ++   D+  +V +A  GF+N++L+     +
Sbjct: 38  YGDFSTAISFLLAKKVGLSLHEVASSIAGGLRSFKDLFKNVSVASGGFVNVFLTSDTWSE 97

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            L+++      YG + IG G  +N+EFVSANPTGP+H+GH R A++ D  A L+   G+ 
Sbjct: 98  FLAAVSDDASGYGFSDIGHGVPLNLEFVSANPTGPLHLGHIRGAIIFDIFAELLDKFGFS 157

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSS 219
           +TREYYINDAG QI+ L  SVF R+ + L   +SD  P   Y G Y+K +   L   +  
Sbjct: 158 LTREYYINDAGKQIDLLVYSVFVRFCEQLQGKESDNFPNSCYAGEYIKDIASYLISTFPD 217

Query: 220 ELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            + +  E K      ++  +   M +I+ DL  L + +D ++ E + H+G+   +  +I 
Sbjct: 218 SVKDTTELKSFSDTFREVILSLTMDMIKSDLAKLGVSYDCYVREKELHKGNY--VEKVIA 275

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L  +GY+ E  LP PK K+     ++RKQ +F S   GDD +R L K DGS+TYFA+D+
Sbjct: 276 VLDEKGYLGEEELPSPKGKSGDW--VERKQKVFLSKKFGDDTNRALQKVDGSWTYFASDV 333

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K ERGF++MI  +G+DH+GYVKRL  V  A+S   A+I++ L  LV L+++G P+
Sbjct: 334 AYHYHKLERGFNHMIVGLGADHAGYVKRLFGVVEALSGGDARIDIKLYNLVNLFKNGKPV 393

Query: 399 KMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           K+SKR GD ITL  V++  +  + +RF ML + +  +LDFD  K    S +NP+FYVQYA
Sbjct: 394 KLSKRNGDLITLDDVLESGITVNEIRFAMLTKSSEIVLDFDLDKFVSTSYDNPLFYVQYA 453

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +ARC S+ R+ ++     D  +   N+          EL L+V LA+ P ++E   ++ E
Sbjct: 454 HARCCSLLRK-REPSAKCDAAMLVENL----------ELDLMVTLAKLPSLLEMIIVSGE 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            +KL FYL ++A  FH  W+ G    +LRF+  +   LT  RL LV AV + + S L ++
Sbjct: 503 VHKLTFYLQEVAERFHSLWNAGMTQNKLRFIIEDEPGLTNARLTLVKAVKNTLASVLKVL 562

Query: 578 GVESPNEM 585
            +E    M
Sbjct: 563 KIEPAERM 570


>gi|157694133|ref|YP_001488595.1| arginyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166980180|sp|A8FIG8|SYR_BACP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157682891|gb|ABV64035.1| arginine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 557

 Score =  359 bits (922), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 210/589 (35%), Positives = 330/589 (56%), Gaps = 42/589 (7%)

Query: 6   DFSSRLKNYLKE------IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + + ++K+ LKE      +   +  E ++ D +++E P+D  HG  STN AM L+R    
Sbjct: 2   NIAEQVKDALKEEIIAAVVKAGLADESQVPD-VLLEVPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV A  K    ++ + IAG GFIN Y++  YL K++ +++ +   YG    G
Sbjct: 61  APRQIAEDIVKAFDKGKASIEKMDIAGPGFINFYMNNQYLTKLIPAVLEAKEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +G++V+REYYINDAG QIN LA
Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   + ++PE  Y G  +K +G++LAD++    ++  EE+ +   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHESEEERMKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   +  +   I   ++ L  +GYV+E          
Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLREKGYVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +      RST  GDD DR L+K DGS+TY   D+AY K K +RGFD +I + G+
Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     ++ V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLD 476
            D+ R+    R  +  +DFD       S ENPV+Y QYA+AR  S+ RQ   K   P+L+
Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F    I  E E+D     L+  +  +P V+  A   + P+++  Y+YDLAS  H  +
Sbjct: 462 KADFSH--IQSEKEYD-----LLKIIGGFPEVVAEAAEKRIPHRVTNYIYDLASALHSFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   N   T  RL L+ A    + + L +IGV +P +M
Sbjct: 515 N------AEKVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557


>gi|54297958|ref|YP_124327.1| arginyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81370250|sp|Q5X3M1|SYR_LEGPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53751743|emb|CAH13165.1| arginine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 589

 Score =  359 bits (922), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 203/590 (34%), Positives = 329/590 (55%), Gaps = 69/590 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  +TN A++L++P    P  +AE +VA I  DP V+ + IAG GFIN 
Sbjct: 33  IKVENAKDPSHGDYATNLALVLAKPCRQAPKVLAERLVAVIPADPSVEKIEIAGAGFINF 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  +    I+S I+  G E+GR  +G+  KV IEFVSANPTGP+HVGH R A  G TL 
Sbjct: 93  FMRSTARSLIISEILNKGKEFGRGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY+VT EYY+NDAG Q+N LA+SV+ RY + L       P   Y G Y+  + +
Sbjct: 153 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIVFPTNGYKGQYVYEIAQ 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKD------------------------------------ 235
           E+  +  ++ ++     W+ +V++                                    
Sbjct: 212 EMWSEQGNQFVH----PWISVVENLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQ 267

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++ ++  I+DDL+A  ++ D + SE      +   I   I  L  +G+ YE       
Sbjct: 268 HALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIEKGIQALKDRGHTYE------- 318

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L FR+T  GD+ DR L++++G  TYFA+D+AY   KY+RGFD +I +
Sbjct: 319 ---------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDI 369

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYV R++    A+   ++ ++V+L +   LYR G  ++MS R+G F+TLR + +
Sbjct: 370 FGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELRE 429

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG+D+ R+  + RK  + +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+     
Sbjct: 430 EVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKW 489

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D D+  +N+   E + +T+ + LI   A YP VI++A  + EP++LA+YL +LA+  H +
Sbjct: 490 DKDMGLKNLDLLEQQHETTLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSY 546

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +       +     +L   RL L+ +V  ++N+GL I+GV +P  M
Sbjct: 547 YNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 589


>gi|52842248|ref|YP_096047.1| arginyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|81377147|sp|Q5ZTX7|SYR_LEGPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52629359|gb|AAU28100.1| arginyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 589

 Score =  359 bits (921), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 203/590 (34%), Positives = 329/590 (55%), Gaps = 69/590 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D AHG  +TN A++L++P    P  +AE +VA I +DP V+ + IAG GFIN 
Sbjct: 33  IKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPVDPSVEKIEIAGAGFINF 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  +    I+S I+  G E+GR  +G+  KV IEFVSANPTGP+HVGH R A  G TL 
Sbjct: 93  FMRSTARSLIISEILNKGKEFGRGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY+VT EYY+NDAG Q+N LA+SV+ RY + L       P   Y G Y+  + +
Sbjct: 153 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIVFPANGYKGQYVYEIAQ 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKD------------------------------------ 235
           E+  +  ++ ++     W+ +V++                                    
Sbjct: 212 EIWSEQGNQFVH----PWISVVENLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQ 267

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++ ++  I+DDL+A  ++ D + SE      +   I   I  L  +G+ YE       
Sbjct: 268 HALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIEKGIQALKDRGHTYE------- 318

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L FR+T  GD+ DR L++++G  TYFA+D+AY   KY+RGFD +I +
Sbjct: 319 ---------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDI 369

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYV R++    A+   ++ ++V+L +   LYR G  ++MS R+G F+TLR + +
Sbjct: 370 FGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELRE 429

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG+D+ R+  + RK  + +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+     
Sbjct: 430 EVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKW 489

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D D+  +N+   E + + + + LI   A YP VI++A  + EP++LA+YL +LA+  H +
Sbjct: 490 DKDMGLKNLDLLEQQHEATLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSY 546

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +       +     +L   RL L+ +V  ++N+GL I+GV +P  M
Sbjct: 547 YNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 589


>gi|165918171|ref|ZP_02218257.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165918031|gb|EDR36635.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 586

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 213/607 (35%), Positives = 327/607 (53%), Gaps = 61/607 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE IV 
Sbjct: 9   LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 68

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +V++E+VSA
Sbjct: 69  ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 128

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q  Y
Sbjct: 129 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 187

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230
               +LP+  Y G Y+  + + L  KY  +  +         PEE             W+
Sbjct: 188 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 247

Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              KD             ++ +++  I++DL+  ++ +D +  E    R     I++ +D
Sbjct: 248 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--EGLIQEGLD 305

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + GYVYE                +R Q  FR+T +GD+ DR L + +G  TYFAAD+
Sbjct: 306 LLTKHGYVYE---------------KNRAQW-FRATALGDEKDRVLFRKNGLPTYFAADV 349

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR    +
Sbjct: 350 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 409

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+QYA+
Sbjct: 410 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 469

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A +   P
Sbjct: 470 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNHEKELLATLGRYPEVIKRAAMNYAP 526

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL ++G
Sbjct: 527 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 579

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 580 VSAPEEM 586


>gi|148359603|ref|YP_001250810.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107645|ref|YP_003619346.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|226701418|sp|A5IDL4|SYR_LEGPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148281376|gb|ABQ55464.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295649547|gb|ADG25394.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 586

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 204/590 (34%), Positives = 329/590 (55%), Gaps = 69/590 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D AHG  +TN A++L++P    P  +AE +VA I  DP V+ + IAG GFIN 
Sbjct: 30  IKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPSDPSVEKIEIAGAGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  +    I+S I+  G E+GR  +G+  KV IEFVSANPTGP+HVGH R A  G TL 
Sbjct: 90  FMRNTARSLIISEILNKGKEFGRGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY+VT EYY+NDAG Q+N LA+SV+ RY + L       P   Y G Y+  + +
Sbjct: 150 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIVFPANGYKGQYVYEIAQ 208

Query: 212 ELADKYSSELLNFPEEKWLPIVKD------------------------------------ 235
           E+  +  ++ ++     W+ +V++                                    
Sbjct: 209 EMWSEQGNQFVH----PWISVVENLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQ 264

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++ ++  I+DDL+A  ++ D + SE      +   I   I  L  +G+ YE       
Sbjct: 265 HALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIEKGIQALKDRGHTYE------- 315

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L FR+T  GD+ DR L++++G  TYFA+D+AY   KY+RGFD +I +
Sbjct: 316 ---------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDI 366

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYV R++    A+   ++ ++V+L +   LYR G  ++MS R+G F+TLR + +
Sbjct: 367 FGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELRE 426

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG+D+ R+  + RK  + +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+     
Sbjct: 427 EVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKW 486

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D D+  +N+   E + +T+ + LI   A YP VI++A  + EP++LA+YL +LA+  H +
Sbjct: 487 DKDMGLKNLDLLEQQHETTLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSY 543

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +       +     +L   RL L+ +V  ++N+GL I+GV +P  M
Sbjct: 544 YNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 586


>gi|313636233|gb|EFS02062.1| arginyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 556

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 210/569 (36%), Positives = 314/569 (55%), Gaps = 40/569 (7%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E   +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFIN YL  +YL  ++  I+     YG++  GKG K  IEFVSANPTG +H+GH
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFGKGEKFQIEFVSANPTGDLHLGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD+LA++M  +G+ V+REYYINDAG QIN L LS   RY +AL   +SD PE  
Sbjct: 143 ARGAAIGDSLANIMTMAGFNVSREYYINDAGNQINNLVLSAEARYFEAL-GLESDFPEDG 201

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  +GK+LA KY  + ++  EE+   + +  ++      +R DL+   +  D + 
Sbjct: 202 YRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDALDFETDKLRADLEEFRVSFDEWF 261

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  + + +   ++ L   GY+YE                D    L R+T   DD 
Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+ A   A+     Q
Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V + +LV L+ DG+ +KM  R G  +T+R +++EVG D+ R+    R +   ++FD  
Sbjct: 364 LEVEIIQLVHLFEDGVQVKMXXRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496
             K  S +NPV+YVQYA+AR  SI R  K    D+  + D  L     +  E+E+D    
Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKEADMSL-----LQTEAEYD---- 474

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L E+  V+  A + + P+++  YL DLA+ FH  ++        + +  +N ++T
Sbjct: 475 -LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNSN------KVLDMDNLEVT 527

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+      + +GL ++GV +P +M
Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|260891979|ref|YP_003238076.1| arginyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864120|gb|ACX51226.1| arginyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 564

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 203/561 (36%), Positives = 316/561 (56%), Gaps = 44/561 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFIN 90
            +E PR+   G  +TN A  L+   G  P  +A L+      D  P +D + +AG G++N
Sbjct: 40  TLEVPREEGFGDFTTNLAFKLASRAGKPPREVAALLAEHFPSDASPYLDRLEVAGAGYLN 99

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL P +L + L  I++ G +YGR  +G+  KVN+EFVSANPTG +H+G+ R A +GD++
Sbjct: 100 FYLKPHWLEEALREILLKGEDYGRQDLGRRRKVNVEFVSANPTGLLHMGNARGAALGDSI 159

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+AF G+EVTREYYINDAG QI   A S+  RY+QA   +    P+GY+    ++ V 
Sbjct: 160 AALLAFCGFEVTREYYINDAGYQIERFAASLEARYRQAFGEDVPVPPDGYHGQDLVETVK 219

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + +++     L   PEE+   +V+ ++++  ++ IR+ L+   +  D++ SE + H    
Sbjct: 220 RFISEHGDRYLHTSPEERREALVR-FAIREKLEAIRNSLENFGVHFDVWFSEQELHAS-- 276

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + + I+ L R+G  YE                    L FR++  G   D  L++++G 
Sbjct: 277 GKVAETIEELKRRGATYE----------------KEGALWFRASAYGAPKDDVLVRANGL 320

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY + K ERGF+ MI + G+DH G+V RL+A   A+     ++ V++ +LVR
Sbjct: 321 PTYFAADIAYHRNKLERGFEWMINLWGADHHGHVPRLKAALQALGYDPERLTVIIMQLVR 380

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  ++MSKRAG+++TL  ++ EVG D+ R+  +WR     LDFD    K QS ENP
Sbjct: 381 LTRGGEAVRMSKRAGEYVTLDDLLAEVGKDAARYFFVWRSADAHLDFDLELAKAQSMENP 440

Query: 451 VFYVQYAYARCRSIFRQ----AKDIFP--DLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           V+Y+QYA+AR  S+FRQ     K + P   +DF         +E E    E +L+  LA 
Sbjct: 441 VYYIQYAHARIASLFRQLAERGKSLPPPEKIDFSFL------REPE----ERRLMYKLAL 490

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P  +E A +   P++LA YL+DL+S+FH  ++  R       +      L   RL L  
Sbjct: 491 FPEEVEGAALNLAPHRLAAYLHDLSSLFHSFYNEHR-------IIGAGSGLEEARLGLAA 543

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++  GL ++G+ +P  M
Sbjct: 544 ATQLVLRQGLKLLGISAPERM 564


>gi|294102407|ref|YP_003554265.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617387|gb|ADE57541.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 558

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/589 (34%), Positives = 327/589 (55%), Gaps = 40/589 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           AD    L+  L E    +  EK +    +    IE+P++  HG  +TNAAM L+R    +
Sbjct: 2   ADVLRTLRQLLDEAVLSMAEEKNVAIDDIPEFAIEKPKNEGHGDWATNAAMQLARIFHDN 61

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV+R+       +V IAG GFIN  LS  ++ +++  I+    +YGR  IG G
Sbjct: 62  PRKLAEQIVSRLADCDYFTAVEIAGPGFINFRLSKKWMGEVVKDIITLDDDYGRQNIGGG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+HVGH R A VGD +A ++ F+G++V +EYYINDAG Q+  L  S
Sbjct: 122 EKVQVEFVSANPTGPLHVGHGRGAAVGDIIARILDFTGWQVEKEYYINDAGLQMEILGRS 181

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              RY + L   + +  PE  Y G Y+  + +E+ D+     L+ P E+ L   + Y+  
Sbjct: 182 TQSRYFKLLNCPERAPFPEDAYKGEYIYDLAREIIDQEGDRFLSLPLEESLGFFQTYAAG 241

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +++ I+ DL    + +D++ SE   +  D + +   ++ L + GY YE           
Sbjct: 242 RILEGIKKDLADFGVAYDVWFSEKSLY--DRNLVPQAMEMLNKHGYAYE----------- 288

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +   L FR+T  GD+ DR L++++G  TYFA+D+ Y   K+ RGF  +I V G+D
Sbjct: 289 -----EEGALWFRATAFGDEKDRVLIRNNGVPTYFASDITYHMEKFSRGFQRVIDVWGAD 343

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++A   A+ +++  + V+L + V L R G  + MS R+G F+TLR V+DEVG 
Sbjct: 344 HHGYVPRMKAGVEALGKERGSLEVVLIQFVNLLRGGEQVAMSTRSGQFVTLRDVMDEVGV 403

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLD 476
           D+ R+  + R++   LDFD    K+ S ENPV+YVQYA+AR  S+ ++A++     P L 
Sbjct: 404 DATRYFFVMRRSDSHLDFDLELAKQSSNENPVYYVQYAHARICSVLKEAENRHIPMPGLA 463

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P  ++  E      E +L+  L+ +P+ ++ A + + P+ +  + YDLA+ FH  +
Sbjct: 464 -GFNPELLVSDE------EKKLVNRLSLFPQEVKRAALDRAPHVIVSFAYDLAADFHSFY 516

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  R       +    + +  MRL LV A  S+++  L ++GV +P  M
Sbjct: 517 NANR-------ILGERQDIMDMRLLLVQASKSVLSRSLKLLGVSAPERM 558


>gi|325291383|ref|YP_004267564.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966784|gb|ADY57563.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 561

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 210/564 (37%), Positives = 325/564 (57%), Gaps = 42/564 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87
           L   VIE PR+  HG L+TN AM+L++     P  IA +I++ +  +   + +  IAG G
Sbjct: 33  LPAFVIEEPRERQHGDLATNLAMLLTKIAKKAPRDIAGVIISHLNTEGTWIKACEIAGPG 92

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  L   +L K+L  ++  G  YG   IGKG K+ +EFVSANPTG +H+G+ R A +G
Sbjct: 93  FINFKLDSGWLGKVLPEVLNKGERYGHVDIGKGQKIQVEFVSANPTGLLHMGNARGAALG 152

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D+LASL++ +GYEV+RE+YINDAG QI+  ALS+  RY Q L   D  LPE  Y G  L 
Sbjct: 153 DSLASLLSMAGYEVSREFYINDAGNQIHHFALSLEARYLQ-LMGQDVPLPENGYHGEDLI 211

Query: 208 HVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
              +EL     DKY   L   PE +   +V+ Y++   ++ I++ L    + +D++ SE 
Sbjct: 212 ETVRELIKLDGDKY---LRTEPELRQEYLVR-YALNEKIRNIKETLGKFGVHYDVWFSEQ 267

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             H  D   I++ +  +  +G++YE                    L  +ST+ GD+ D  
Sbjct: 268 SLH--DSGSIQETMQEMMDKGFIYE----------------KEGALWLKSTLFGDEKDEV 309

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +++S+G  TYFAAD+AY K K+ERGF+ +I + G+DH G+V R++    A+     ++ +
Sbjct: 310 VVRSNGVPTYFAADIAYHKNKFERGFEQVINIWGADHHGHVARMKGAMQALGYDPERLQI 369

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L +LVRL +DG  +KMSKR+G +ITL+ ++DEVG D+ RF  + R     ++FD    K
Sbjct: 370 ILMQLVRLIQDGEIVKMSKRSGQYITLQELMDEVGRDAARFFFIMRDPDSTVEFDLDLAK 429

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            QS +NPV+YVQYA+AR  SI RQA++     +++ D+   +++  + E D     L+  
Sbjct: 430 SQSADNPVYYVQYAHARLCSILRQAEEQGFAHEVEPDIKQISLLASQEECD-----LLKK 484

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA+ P  I  A    EP++LA Y+ +LA +FH  ++  R       V  ++  L   RL 
Sbjct: 485 LADLPGEIALAARMTEPHRLARYVMELAGLFHSFYNSHR-------VLVDDADLRTARLA 537

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+ A+  ++ + L I+GV +P  M
Sbjct: 538 LIRAIRQVLANVLTILGVTAPERM 561


>gi|239906966|ref|YP_002953707.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511642|sp|C4XSX9|SYR_DESMR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|239796832|dbj|BAH75821.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 551

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 210/563 (37%), Positives = 316/563 (56%), Gaps = 44/563 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  IE PRD AHG L+TN AM+ S+     P  +AE +   +  DP + SV +AG GF+N
Sbjct: 25  KTTIEPPRDKAHGDLATNVAMMASKAAKKPPRELAESLRQALAADPRLASVEVAGPGFLN 84

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +  +P++ ++ +  +  +G  YG   IG+G K+ +EFVSANPTGP+H+GH R A VGD+L
Sbjct: 85  VAFTPAFWQETVCDVAKAGDGYGLLDIGQGVKIQVEFVSANPTGPLHIGHGRGAAVGDSL 144

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G+ V  EYYINDAG Q+  L +S+ +RY++ L       PE YY G Y+  + 
Sbjct: 145 ARVLRAAGFTVETEYYINDAGRQMRILGMSILYRYKE-LIGEPVTEPEDYYRGEYVIPLA 203

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +++ D +  +LL  PE +   I + +  + ++  I+ DL+   + HD++  E        
Sbjct: 204 QDMIDAHGRKLLEMPEAEATDICRLHGEREILAGIKKDLEDFRVHHDVWFPESTLLAA-- 261

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +    + L  +   Y               D D     F ST  GDD DR L+KS G 
Sbjct: 262 GAVDAAFNELRDKKLAY---------------DQD-GAFWFASTAFGDDKDRVLVKSGGE 305

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELV 389
            TYFA+D+AY   K+ RGFD ++ + G+DH GYV R++A  +A+  + +A + V+L +LV
Sbjct: 306 LTYFASDIAYHADKFRRGFDVVVDIWGADHHGYVPRMKACVSALGRDPEASLKVILVQLV 365

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L + G  I MS RAG F TL  VV EVG+DS RFM L RK+   LDFD   VKE+S +N
Sbjct: 366 NLLKGGEQIAMSTRAGKFETLADVVKEVGADSARFMFLSRKSDSHLDFDLDAVKEKSMDN 425

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL-------QLIVHL 502
           PV+YVQYA+AR RS+F +A++           R     E+  +   L       +L+  L
Sbjct: 426 PVYYVQYAHARVRSLFAKAQE-----------RGQAVAETSPELLALLTTDEDLELLKLL 474

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +YP  +  A     P+ ++FYL DLA   H +++    NP L    A +  L   RL+L
Sbjct: 475 EQYPDTVAAAARTFSPHLVSFYLRDLAGRLHRYYT---VNPVL---TAGSDDLASARLRL 528

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + AVA  I +GL+++GV +P++M
Sbjct: 529 LDAVAQTIKNGLDLLGVSAPDKM 551


>gi|126652598|ref|ZP_01724762.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126590589|gb|EAZ84706.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 555

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 198/556 (35%), Positives = 319/556 (57%), Gaps = 35/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I +E P+D A+G  +TN AM L++     P  IAE I+  +  +  D++ + IAG GF+N
Sbjct: 33  IHLETPKDKANGDYATNIAMQLTKLAKKPPRAIAEAILENLDTEGTDIEKIDIAGPGFMN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + +   +L  +++ ++  G +YGR+  G G KV IEFVSANPTG +H+GH R A VGD+L
Sbjct: 93  ITVRKDFLTGVVTQVIEQGADYGRSNAGAGEKVQIEFVSANPTGDLHLGHARGASVGDSL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY V+REYYINDAG QIN LA S+  RY+QAL   D+++PE  Y G  +  + 
Sbjct: 153 CNVLDMAGYSVSREYYINDAGNQINNLANSLEARYKQAL-GLDAEMPEDGYHGPDIIEIA 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +LA ++   +L   +E+     + + +   +  ++ DL    +  D++ SE   +  + 
Sbjct: 212 GKLAIEHGDAILTKSDEERFAFFRQHGLALELDKLKTDLANFRVNFDVWYSETSLY--EN 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   +D L   G+V+E                +     FRST  GDD DR L+K+DGS
Sbjct: 270 GKIEVALDKLKANGHVFE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +TY   D+AY + K  RGFD +I + G+DH GY+ R++A   A+   +  + V + ++V+
Sbjct: 314 FTYLTPDIAYHEDKIVRGFDKLINIWGADHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQ 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY++G   KMSKR G+ +T+R +V+EVG D+VR+  +       +DFD      QS ENP
Sbjct: 374 LYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMDFDLDLAVSQSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+Y QYA+AR  SI R A +  F     +L   N++  E E D     L+  + ++P+V+
Sbjct: 434 VYYAQYAHARISSILRSANEQGFAATSENL---NLLTAEKEID-----LLKKIGDFPQVV 485

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A   + P+++A Y+ + A+ FH  ++        + + A+N++LT  RL L+ AV + 
Sbjct: 486 ADAAKHRTPHRIANYIQETAAAFHSFYN------AEKVLDASNKELTEARLALITAVRTT 539

Query: 570 INSGLNIIGVESPNEM 585
           I + L +IGV +P +M
Sbjct: 540 IANALRLIGVSAPEKM 555


>gi|212213468|ref|YP_002304404.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238065086|sp|B6J3D4|SYR_COXB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212011878|gb|ACJ19259.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 592

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 212/610 (34%), Positives = 326/610 (53%), Gaps = 61/610 (10%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++ L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE 
Sbjct: 12  ATLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEK 71

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  +     +  V IAG GFIN +++    + I+SSI+ +G +YGR+ +GKG +V++E+
Sbjct: 72  IVEALPPSGQITEVEIAGPGFINFFVTEGSYQTIVSSILKAGKDYGRSEMGKGQRVHMEY 131

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q
Sbjct: 132 VSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWIRYLQ 191

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------ 227
             Y    +LP+  Y G Y+  + + L  KY  +  +         PEE            
Sbjct: 192 G-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLD 250

Query: 228 KWLPIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            W+   KD             ++ +++  I++DL+   + +D +  E    R     I++
Sbjct: 251 AWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQE 308

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            +D L + GYVYE                      FR+T +GD+ DR L++ +G  TYFA
Sbjct: 309 GLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFA 352

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           AD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR  
Sbjct: 353 ADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGN 412

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
             + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+Q
Sbjct: 413 EKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQ 472

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A + 
Sbjct: 473 YAHARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMN 529

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL 
Sbjct: 530 YAPHLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLT 582

Query: 576 IIGVESPNEM 585
           ++GV +P EM
Sbjct: 583 LLGVSAPEEM 592


>gi|147679179|ref|YP_001213394.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146275276|dbj|BAF61025.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 565

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 203/561 (36%), Positives = 322/561 (57%), Gaps = 45/561 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91
            +E PR+  HG  +TN A++L+RP  + P   AE++     +    V+ V IAG GFIN 
Sbjct: 42  TVEVPREKEHGDFATNLALLLARPARMAPRRAAEILAQNFSQTGTWVERVEIAGPGFINF 101

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YL+P+++ + L  I+  G +YGR   GKG KV +EFVSANPTG +H+G+ R A +GD++A
Sbjct: 102 YLNPAWVYQALPRIIRLGEDYGRVNQGKGKKVQVEFVSANPTGLLHMGNARGAALGDSIA 161

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-KHVG 210
           +++ F+GY+VTRE+YINDAG QI    LS+  RY Q L   D  +PEG Y G  L K V 
Sbjct: 162 AILEFAGYDVTREFYINDAGNQIENFGLSLEARYMQ-LMGRDVPVPEGGYHGEDLVKTVR 220

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             +A      L   P E+   +VK +++   +  I+  L+   + +D++ SE   H  D 
Sbjct: 221 DFIAVNGDRHLALPPGERRAALVK-FALADKLGAIKKTLEEFGVHYDVWFSEQSLH--DS 277

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             ++D ++ L   GY+YE                +   L F++T  G D D  +++S+G 
Sbjct: 278 GAVQDTLNYLREMGYIYE----------------NENALWFKATSFGADKDEVVVRSNGV 321

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY + K++RGF+ +I + G+DH G+V R++A  AA+    A ++V++ +LVR
Sbjct: 322 PTYFASDIAYHRNKFQRGFEWVINIWGADHHGHVPRMKAAVAALGYDPAALDVVIMQLVR 381

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY+ G  ++MSKR+G F+TL  +++EVG D+ R+  + R +   LDFD    + +S ENP
Sbjct: 382 LYKGGELVRMSKRSGQFVTLEELMEEVGRDAARYFFVMRSSDSHLDFDLDLARAESNENP 441

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAE 504
           V+Y+QYA+AR  SI RQ ++   +          +P  S+ D S      EL L   LA+
Sbjct: 442 VYYIQYAHARISSILRQLEERGEE----------VPDPSQVDYSLLKEEQELALARKLAD 491

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P  + +A     P ++A YL++LA + H  ++  R       V  ++R+L+  RL LV 
Sbjct: 492 FPEEVSSAARGLAPQRIARYLHELAGLLHSFYNSHR-------VITSDRELSRARLVLVS 544

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    + + L ++G+ +P  M
Sbjct: 545 ATRITLRNALGLLGLSAPERM 565


>gi|296134410|ref|YP_003641657.1| arginyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032988|gb|ADG83756.1| arginyl-tRNA synthetase [Thermincola potens JR]
          Length = 561

 Score =  357 bits (915), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 198/554 (35%), Positives = 320/554 (57%), Gaps = 31/554 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91
           V+E PR+  HG  +TN AM+L+R   + P  IAE IV ++ K D  + ++ +AG GFIN 
Sbjct: 38  VLEVPRERGHGDFATNIAMLLTRQARMAPRQIAEAIVKQLDKSDLPIVNIEVAGPGFINF 97

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YLS  +L  +L  I   G +YG + +G G KV +EFVSANPTG +H+G+ R A +GD++A
Sbjct: 98  YLSAEWLYDVLPEIEDQGAKYGYSSVGNGLKVQVEFVSANPTGLLHMGNARGAALGDSMA 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           SL+A +G++V RE+YINDAG QI     S+  RY Q L   D   PE  Y G  +    +
Sbjct: 158 SLLAAAGFDVQREFYINDAGNQIENFGKSLEARYFQ-LLGRDVAFPEDGYHGQDIIDTVQ 216

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + D+  ++ L+        ++   ++   +  IR  L    +++D++ SE   H  D  
Sbjct: 217 GIIDREGNKYLSLDSRLRRELLVKEALNEKLDGIRKSLADFGVKYDVWFSEQTLH--DSG 274

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +++ L  +GY+YE                    L F++T  GD+ D  +++S+G+ 
Sbjct: 275 AVEQVLNELREKGYIYE----------------HEGALWFKATEFGDEKDEVVVRSNGTP 318

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFAAD+AY K K++RGF  +I + G+DH G+V RL+    A+     ++ V++ +LVRL
Sbjct: 319 TYFAADIAYHKNKFDRGFQWVINIWGADHHGHVNRLKGAMQALGYDPDKLQVVIMQLVRL 378

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +R G  ++MSKR+G+F+TL  +V+EVG D+ R+  + R     LDFD    K +S +NPV
Sbjct: 379 FRGGEIVRMSKRSGEFVTLDDLVEEVGKDAARYFFVMRSPDSHLDFDMDLAKSKSNDNPV 438

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +Y+QYA+AR  SIFRQ ++    +      RN+ P   +   +EL+L+  LA++P  +  
Sbjct: 439 YYIQYAHARICSIFRQVQESGISVP---SARNINPAVLK-QAAELELLRKLADFPTEVAE 494

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A +  EP+++A YL++LA +FH  ++  R       V   ++ +   RL LV +V  ++ 
Sbjct: 495 AAVNLEPHRMARYLHELAGIFHSFYNSNR-------VMIEDKDIRDARLVLVKSVQQVLK 547

Query: 572 SGLNIIGVESPNEM 585
           +GL ++G+ +P  M
Sbjct: 548 TGLALLGLTAPERM 561


>gi|329930208|ref|ZP_08283821.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328935230|gb|EGG31711.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 559

 Score =  357 bits (915), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 209/567 (36%), Positives = 314/567 (55%), Gaps = 39/567 (6%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82
           V ++ L  I +E P+D +HG L+TN AM L+R    +P  IAE I+  +      ++   
Sbjct: 27  VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN  L   YL  I++ +   G  YGR   G+G KV +EFVSANPTG +H+GH R
Sbjct: 87  IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIATGEGQKVQMEFVSANPTGSLHLGHAR 146

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A VGD L +++ F+GYEVTREYYINDAG Q+  L  S+  RY Q L   D+++PE  Y 
Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G  +K   KEL  +    LL+    +    ++ + ++  +  I+ DL    +  D + SE
Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPGERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  +   +   ++ L  +G  YE      K   T            R+T  GDD DR
Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE------KDGAT----------WLRTTDYGDDKDR 307

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+K+DG+YTY   D+AY + KYERG+D ++ + G+DH GYV R++A   A+     ++ 
Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD    
Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498
              S ENPVFYVQYA+AR  S+FRQA++    + P  D +L   +V+  E E+D     +
Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQGVSLLPLADVNL---SVLTAEHEYD-----I 479

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  + E P+ +  A     P++L  Y+Y+LAS+FH ++       R   V   +   T  
Sbjct: 480 LRKMGELPQEVSLAAENYAPHRLIRYVYELASLFHSYY-------RAERVITEDANQTQA 532

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L+ AV ++I + L ++GV +P  M
Sbjct: 533 RLALLGAVRTVIANVLRLMGVSAPERM 559


>gi|212219516|ref|YP_002306303.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238065085|sp|B6J667|SYR_COXB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212013778|gb|ACJ21158.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 592

 Score =  357 bits (915), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE IV 
Sbjct: 15  LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 74

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +V++E+VSA
Sbjct: 75  ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 134

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q  Y
Sbjct: 135 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 193

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230
               +LP+  Y G Y+  + + L  KY  +  +         PEE             W+
Sbjct: 194 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 253

Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              KD             ++ +++  I++DL+  ++ +D +  E    R     I++ +D
Sbjct: 254 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--EGLIQEGLD 311

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + GYVYE                      FR+T +GD+ DR L + +G  TYFAAD+
Sbjct: 312 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGLPTYFAADV 355

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR    +
Sbjct: 356 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 415

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+QYA+
Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 475

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A +   P
Sbjct: 476 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNHEKELLATLGRYPEVIKRAAMNYAP 532

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL ++G
Sbjct: 533 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 585

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 586 VSAPEEM 592


>gi|261403996|ref|YP_003240237.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280459|gb|ACX62430.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 559

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 209/567 (36%), Positives = 314/567 (55%), Gaps = 39/567 (6%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82
           V ++ L  I +E P+D +HG L+TN AM L+R    +P  IAE I+  +      ++   
Sbjct: 27  VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN  L   YL  I++ +   G  YGR   G+G KV +EFVSANPTG +H+GH R
Sbjct: 87  IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIASGEGQKVQMEFVSANPTGSLHLGHAR 146

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A VGD L +++ F+GYEVTREYYINDAG Q+  L  S+  RY Q L   D+++PE  Y 
Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G  +K   KEL  +    LL+   ++    ++ + ++  +  I+ DL    +  D + SE
Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPDERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  +   +   ++ L  +G  YE      K   T            R+T  GDD DR
Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE------KDGAT----------WLRTTDYGDDKDR 307

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+K+DG+YTY   D+AY + KYERG+D ++ + G+DH GYV R++A   A+     ++ 
Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD    
Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498
              S ENPVFYVQYA+AR  S+FRQA++      P  D +L   +V+  E E+D     +
Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQGVSFLPLADVNL---SVLTAEHEYD-----I 479

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  + E P+ +  A     P++L  Y+Y+LAS+FH ++       R   V   +   T  
Sbjct: 480 LRKMGELPQEVSLAAENYAPHRLIRYVYELASLFHSYY-------RAERVITEDANQTQA 532

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L+ AV ++I + L ++GV +P  M
Sbjct: 533 RLALLGAVRTVIANVLRLMGVSAPERM 559


>gi|164685833|ref|ZP_01945807.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|164601349|gb|EAX33686.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
          Length = 586

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE IV 
Sbjct: 9   LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 68

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +V++E+VSA
Sbjct: 69  ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 128

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q  Y
Sbjct: 129 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 187

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230
               +LP+  Y G Y+  + + L  KY  +  +         PEE             W+
Sbjct: 188 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 247

Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              KD             ++ +++  I++DL+  ++ +D +  E    R     I++ +D
Sbjct: 248 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--EGLIQEGLD 305

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + GYVYE                      FR+T +GD+ DR L + +G  TYFAAD+
Sbjct: 306 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGLPTYFAADV 349

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR    +
Sbjct: 350 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 409

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+QYA+
Sbjct: 410 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 469

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A +   P
Sbjct: 470 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNHEKELLATLGRYPEVIKRAAMNYAP 526

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL ++G
Sbjct: 527 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 579

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 580 VSAPEEM 586


>gi|332800368|ref|YP_004461867.1| arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332698103|gb|AEE92560.1| Arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 569

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 205/593 (34%), Positives = 328/593 (55%), Gaps = 52/593 (8%)

Query: 19  DCKIKVEKKILDRIV---------------------IERPRDCAHGHLSTNAAMILSRPL 57
           D K +V++K++D ++                     IE P+D  HG  +TN AMIL+R  
Sbjct: 3   DLKTQVQQKLMDIVMSALNKAIDDGALPIKDIPDFHIEVPQDKGHGDFATNIAMILAREA 62

Query: 58  GLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            + P  I E+I  R+       ++ + +AG GFIN YL P+++  ++S I+  G ++GR 
Sbjct: 63  KMPPRKIGEVIAERVDTTHSNLIEKIEVAGPGFINFYLVPTWVNAVISDILKYGSDFGRC 122

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
             G+G KV +EFVSANPTGPMH+G+ R A +GD LAS++   G++VT+E+YINDAG QI 
Sbjct: 123 NTGEGKKVQVEFVSANPTGPMHMGNARGAALGDALASILEMVGFDVTKEFYINDAGNQIE 182

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              LS+  RY + L     ++PEG Y G  +    K+L ++     L            +
Sbjct: 183 NFGLSLEARYLE-LMGKQGEIPEGGYHGEDIIEHMKDLIEQEGDRFLYMDSPTRRAYFIN 241

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y+++  ++ ++ DL+   +  D++ SE   H      + ++I  L  +GY YE       
Sbjct: 242 YALEKNIERMKKDLENFGVHFDVWFSEQSLHS--SGKVNEVIKILTDRGYTYE------- 292

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L F+++  G+  D  L++++G  TYFA+D+AY K K++RGFD +I +
Sbjct: 293 ---------KDGALWFKASQFGETKDEVLIRANGLPTYFASDIAYHKNKFDRGFDWVINI 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++ R++    A+     ++ V++ +LVRLYR+G   +MSKR G  +TL  +V+
Sbjct: 344 WGADHHGHIARMKGALEALGYDPDKLTVIIMQLVRLYRNGEIARMSKRTGRAVTLADIVE 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     LDFD     +QS +NPV+YVQYA+AR  SI RQAK+   D+
Sbjct: 404 EVGKDAARFFFNLRSADTHLDFDLDLAIKQSDDNPVYYVQYAHARISSILRQAKEQGVDI 463

Query: 476 -DFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            + +   +N + + ++   + SE++LI  LA++P  I+ A     PY++  Y  +LAS F
Sbjct: 464 PNVNNLTQNDMNKYADLLIEESEIELIKKLADFPGEIKLAADNLAPYRITVYSQELASAF 523

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  ++  R       V  + + LT  RL LV AV  +I + L I+G+ +P+ M
Sbjct: 524 HSFYNKCR-------VLTDAQDLTTARLLLVMAVQQVIKNALAILGISAPDRM 569


>gi|260655517|ref|ZP_05861005.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629965|gb|EEX48159.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 561

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 204/576 (35%), Positives = 312/576 (54%), Gaps = 41/576 (7%)

Query: 20  CKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
            KI  EK I      R+  ERP+D +HG  +TN AM  ++ LG  P  +AE + + I   
Sbjct: 17  AKIAQEKGIQLPETCRVEFERPKDESHGDWATNVAMKCAKILGTRPRDLAERLTSLIDDS 76

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
             + S+ +AG GFIN  LS  ++  +++ I  +G  YG++ +G G  V +EFVSANPTGP
Sbjct: 77  KHIASMEVAGPGFINFRLSNQWMDDLVARIAENGENYGKSSVGAGRSVQVEFVSANPTGP 136

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS- 194
           +HVGH R A VGD + +++AF+G++V +EYY+NDAG QIN LA S+  RY +     +  
Sbjct: 137 LHVGHGRGAAVGDVVGNILAFAGWKVEKEYYVNDAGLQINILAKSILARYFELQGCPEKL 196

Query: 195 ---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              D P   Y G Y+    + + +   ++ +N  +++ L  ++ +  Q +++ I+ DL  
Sbjct: 197 PFDDAPGAMYKGAYIYDEARRVIEAVGNKFVNSSQDEALAYLRQFGAQHILENIKSDLAR 256

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             ++ + F SE   +  D   +R  ++ L   GYVYE                    L +
Sbjct: 257 FGVKFNQFFSEKSLYERDL--VRKAVETLREAGYVYE----------------KDGALWY 298

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           RST  GDD DR L +S G  TYFA+D+AY K K++RGFD +I V G DH GYV R+ A  
Sbjct: 299 RSTDFGDDKDRVLFRSTGEPTYFASDVAYHKEKFDRGFDRVIDVWGCDHHGYVPRINAAL 358

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             + +     NVLL + V L +DG  + MS R G F TL  ++DEVG D+ R+  L R++
Sbjct: 359 RGLGKDAGDFNVLLIQFVNLVKDGQIVGMSTRGGKFETLASLLDEVGVDAARYYFLMRRS 418

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              LDFD  + K +S +NPV+YVQYAYAR  S+ R+A++   D+         +P +   
Sbjct: 419 DSQLDFDMDQAKRESSDNPVYYVQYAYARIASLTRKAQEKNIDMT------KPLPFDGRL 472

Query: 492 DTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
            TS  E +L+  L  +P  +E A    EP+ L  Y+++L+  FH  ++  R       + 
Sbjct: 473 MTSPEEKRLLTALETFPGELERAAAGLEPHLLVTYVHELSGHFHAFYNSCR-------IL 525

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  L    L LV AV +++ +   I+G  +P  M
Sbjct: 526 DEDEPLRSSHLALVQAVRTVLKNCFGILGFSAPERM 561


>gi|161830885|ref|YP_001595968.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189083530|sp|A9N9G2|SYR_COXBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|161762752|gb|ABX78394.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 586

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE IV 
Sbjct: 9   LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 68

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +V++E+VSA
Sbjct: 69  ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 128

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q  Y
Sbjct: 129 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 187

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230
               +LP+  Y G Y+  + + L  KY  +  +         PEE             W+
Sbjct: 188 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 247

Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              KD             ++ +++  I++DL+   + +D +  E    R     I++ +D
Sbjct: 248 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQEGLD 305

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + GYVYE                      FR+T +GD+ DR L++ +G  TYFAAD+
Sbjct: 306 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFAADV 349

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR    +
Sbjct: 350 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 409

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+QYA+
Sbjct: 410 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 469

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A +   P
Sbjct: 470 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMNYAP 526

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL ++G
Sbjct: 527 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 579

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 580 VSAPEEM 586


>gi|313673413|ref|YP_004051524.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940169|gb|ADR19361.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 542

 Score =  355 bits (912), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 213/555 (38%), Positives = 310/555 (55%), Gaps = 38/555 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            IE P+   +G  S+N A +LS+ L   P+ IA  IV+ I    +   V +A  GFIN +
Sbjct: 24  TIEIPKKSENGDFSSNVAFVLSKALKQRPIDIANEIVSYID-KKNFSKVEVAPPGFINFF 82

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS       L +I+    ++    IG   K  +EFVSANPTGP+H+GH R +  GDT+A 
Sbjct: 83  LSKEPYYNFLKAII-EKPDFHIEKIGNNKKAMVEFVSANPTGPLHIGHGRGSAYGDTIAR 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  SG+ V +EYYINDAG Q+N LALS++ RY + L+  D   P   Y G Y+  + K+
Sbjct: 142 LLNISGFNVYKEYYINDAGNQMNNLALSIYSRYCE-LFGKDYPFPADGYKGEYIIDIAKD 200

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +A+KY   LLN  E   + I  +  V+ ++  I  DL+   +  D + SE   +  +   
Sbjct: 201 IAEKYQDNLLN-DEINGIKICFEIGVKTILDGIEADLRDFRVTFDNWFSEKSLY--ESQE 257

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   I+ L + GY+YE                    L F+S  +GDD DR + +S G YT
Sbjct: 258 VEKTIELLKKNGYIYE----------------KDNALWFKSEQLGDDKDRVIKRSTGEYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY K K+ERGF+ ++ V G+DH GYV RL+    A+      + + L ++V L 
Sbjct: 302 YFASDIAYHKNKFERGFEYLVDVWGADHHGYVNRLKNGVKALGIDVENLKIQLIQMVSLI 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           + G  I MS RAG+FITLR ++DEVG+D+ R+  L R  +   DFD    K +S +NPV+
Sbjct: 362 KGGERISMSTRAGEFITLRWLLDEVGTDAARYFYLMRDINSQFDFDIDLAKSKSNDNPVY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIE 510
           Y+QYA+AR  S+ R AK+    +DF       I  + E  T  SEL++I  L ++  VI+
Sbjct: 422 YIQYAHARVCSLKRNAKE--KGIDFK------ISNDLELLTLPSELEIIKKLYDFKNVIK 473

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            ATI  EP+++ +YL DLA +FH ++ +         V  N+ K T  RL L  AVA  I
Sbjct: 474 TATINLEPHRICYYLQDLAGLFHTYYYN------TTIVDENDLKTTNARLSLSEAVAKTI 527

Query: 571 NSGLNIIGVESPNEM 585
           + GLNI+GV +P  M
Sbjct: 528 SLGLNILGVSAPERM 542


>gi|315644448|ref|ZP_07897581.1| arginyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280198|gb|EFU43491.1| arginyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 559

 Score =  355 bits (912), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 209/567 (36%), Positives = 315/567 (55%), Gaps = 39/567 (6%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82
           V ++ L  I +E P+D +HG L+TNAAM L+R    +P  IAE I+  +      ++   
Sbjct: 27  VSREELPAITLEVPKDKSHGDLATNAAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN  L   YL  I++ +   G  YGR  IG+G KV +EFVSANPTG +H+GH R
Sbjct: 87  IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRITIGEGQKVQMEFVSANPTGSLHLGHAR 146

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A VGD L +++ ++GYEVTREYYINDAG Q+  L  S+  RY Q L   D+++PE  Y 
Sbjct: 147 GAAVGDALCNVLDYAGYEVTREYYINDAGNQVVNLIKSLEARYLQEL-GQDAEMPEDGYH 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G  +K   KEL  +    LL+    +     +++ ++  +  I+ DL    +  D + SE
Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMSPGERTAFFREFGLEKELGKIKRDLNRFRVHFDEWFSE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  +   +   ++ L  +G  YE      K   T            R+T  GDD DR
Sbjct: 266 TSLY--EDGLVEKSLEELRSKGEAYE------KDGAT----------WLRTTDYGDDKDR 307

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+K+DG+YTY   D+AY + KYERG+D ++ + G+DH GYV R++A   A+     ++ 
Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD    
Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498
              S ENPVFYVQYA+AR  S+FRQA++    + P  + +L   +V+  E E+D     +
Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQGINLLPLAEVNL---SVLTAEHEYD-----I 479

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  + E P+ +  A     P++L  Y+Y+LAS FH ++       R   V   +   T  
Sbjct: 480 LRKIGELPQEVSLAADNYAPHRLIRYVYELASSFHSYY-------RAERVITEDADQTQA 532

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L+ AV ++I + L ++GV +P  M
Sbjct: 533 RLALLGAVRTVIANVLRLMGVSAPERM 559


>gi|298530549|ref|ZP_07017951.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509923|gb|EFI33827.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 551

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 203/584 (34%), Positives = 345/584 (59%), Gaps = 48/584 (8%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA----E 66
           ++ +L+E+  ++ +  K  D+  IE PR+ + G L+ N AM+L+   G  P  +A    +
Sbjct: 7   VEKHLREVVHELGL--KWPDKASIETPREKSFGDLACNLAMLLAGQAGEKPRDLAARFKD 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +++ R +    + S+ IAG GF+N    PS+ + I+  I      +G + +G+  K+ +E
Sbjct: 65  MMLGRAE---KLQSIEIAGPGFLNFTFKPSFWQSIIPVIQKEQEGFGSSDLGRKHKIQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +GD+LA ++ F+G+E + EYY+NDAG Q+  L  SV  RY+
Sbjct: 122 YVSANPTGPLHIGHGRGAALGDSLARILRFAGFEASTEYYLNDAGRQMYVLGDSVLIRYE 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   +++L   +Y G YL+   + L  ++  +LL    E  + + ++ +VQ+++  I+
Sbjct: 182 Q-LCGLEAELSPDHYQGEYLQDDARALYQEHGRDLLKQDRESAIALCREKAVQSILAGIK 240

Query: 247 DDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQKCD 303
           +DL+   ++H ++ SE   F RG+   ++  ++ L  +   Y+++G L            
Sbjct: 241 EDLEHFGVEHQVWFSEQGLFDRGE---VQKTLEWLQEKDMAYIHDGAL------------ 285

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                  FRST  GDD DR L KSDG+ TYFA+D+AY   K+ RGF+ ++ + G+DH GY
Sbjct: 286 ------WFRSTSFGDDKDRVLQKSDGALTYFASDIAYHHNKFNRGFETVVDIWGADHHGY 339

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             R++A   A+      + V+L +LV L R G  + MS R+G+F+TLR V++EVG D+ R
Sbjct: 340 APRMQAAVQALGRPAGSLRVILVQLVNLLRAGQQVSMSTRSGEFVTLRQVMEEVGVDACR 399

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F+ L RK+   LDFD  +VK++S +NPVFYVQYA+AR  S+F +A +    +D    P++
Sbjct: 400 FIFLSRKSDSHLDFDLEEVKKKSMDNPVFYVQYAHARICSVFAKAAE--RGIDTGPEPQS 457

Query: 484 VIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS-HGRE 541
           ++   ES+ D   L L+  L  +P +++ A     P+ ++FYL +LA + H +++ H   
Sbjct: 458 LLHLLESQED---LDLLKQLEMFPDMVQAAARNLSPHHISFYLRELAGLLHRYYTVHSVL 514

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N       A++R+L   R+ L+ A A ++++GL ++GV +P +M
Sbjct: 515 N-------ADSRELIHARMLLLQATARVLSNGLKLLGVHAPEKM 551


>gi|297585470|ref|YP_003701250.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143927|gb|ADI00685.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 555

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 198/552 (35%), Positives = 308/552 (55%), Gaps = 37/552 (6%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSP 95
           P+D +HG  ++N AM L+R     P  IAE I A + ++   V++V IAG GF+N  +  
Sbjct: 38  PKDKSHGDYASNLAMQLARVAKKAPKQIAEDIQANLDLEAASVETVEIAGPGFLNFTMKK 97

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            YL  ++ +++    ++G   +G G K+ +EFVSANPTG +H+GH R A VGD L  ++ 
Sbjct: 98  DYLADVVKAVLAKQDDFGSTDVGNGKKIQVEFVSANPTGTLHLGHARGAAVGDALCHILD 157

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            +GY+VTREYYINDAG QI+ LALS+  RY QAL   ++D+PE  Y G  +    +EL D
Sbjct: 158 KAGYDVTREYYINDAGNQIDNLALSLEARYLQAL-GEEADMPEDGYQGKDIIGFAEELVD 216

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            Y     +          +++ ++  +  +++DL    +  D++ SE   +  +   + +
Sbjct: 217 TYGDRFKDADPANRQAFFREFGLKRELDKLKNDLNDYRVHFDVWFSETSVY--ENGQVEE 274

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           I+++L  +   YE                      FRST  GDD DR L+K DGSYTY  
Sbjct: 275 ILEDLKARDKTYE----------------HEGATWFRSTDYGDDKDRVLVKGDGSYTYLT 318

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+AY   K++RGFD +I + G+DH GY+ R++A   A+   + Q++V + ++V L+ +G
Sbjct: 319 PDIAYHNDKFKRGFDEVINIWGADHHGYIARMKAAVQALGYDEEQLSVQIIQMVNLFENG 378

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
             +KMSKR G  +T+R +++EVG D+ R+    R     LDFD    K QS ENPVFYVQ
Sbjct: 379 EKVKMSKRTGKAVTMRELMEEVGIDATRYFFAMRAADTHLDFDLDLAKSQSNENPVFYVQ 438

Query: 456 YAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           YA+AR  S+ RQAK+    PD   DL     +  E E D     L+  L E+P  + +A 
Sbjct: 439 YAHARICSMIRQAKEKGFEPDPSADL---TKLTSEKEHD-----LMKKLGEFPEAVADAA 490

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             + P+++  Y+++LA   H  ++  +       V  ++  LT  RL LV AV   + +G
Sbjct: 491 SRRLPHRITNYVHELAQALHSFYNADK-------VITDDEALTKARLALVEAVRITLRNG 543

Query: 574 LNIIGVESPNEM 585
           L+++GV +P +M
Sbjct: 544 LSLVGVSAPEKM 555


>gi|54294929|ref|YP_127344.1| arginyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81368288|sp|Q5WV09|SYR_LEGPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53754761|emb|CAH16248.1| arginine tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 589

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 205/586 (34%), Positives = 330/586 (56%), Gaps = 61/586 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D AHG  +TN A++L++P    P  +AE +VA I  DP V+ + IAG GFIN 
Sbjct: 33  IKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPADPSVEKIEIAGAGFINF 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  +    I+S I+  G E+G+  +G+  KV IEFVSANPTGP+HVGH R A  G TL 
Sbjct: 93  FMRSTARSLIISEILNKGKEFGQGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY+VT EYY+NDAG Q+N LA+SV+ RY + L       P   Y G Y+  + +
Sbjct: 153 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIAFPANGYKGQYVYEIAQ 211

Query: 212 ELADKYSSELL--------NFP--------EEKWLPIV---------KD-------YSVQ 239
           E+  +  ++ +        N P        +E ++  +         KD       ++++
Sbjct: 212 EMWSEQGNQFVHPWISVVDNLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQHALK 271

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            ++  I+DDL+A  ++ D + SE      +   I   I  L  +G+ YE           
Sbjct: 272 TVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIGKGIQALKDRGHTYE----------- 318

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L FR+T  GD+ DR L++++G  TYFA+D+AY   KY+RGFD +I + G+D
Sbjct: 319 -----REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDIFGAD 373

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++    A+   ++ ++V+L +   LYR G  ++MS R+G F+TLR + +EVG+
Sbjct: 374 HHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELREEVGN 433

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+  + RK  + +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+     D D+
Sbjct: 434 DAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKWDKDM 493

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +N+   E + + + + LI   A YP VI++A  + EP++LA+YL +LA+  H +++  
Sbjct: 494 GLKNLDLLEQQHEATLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAI 550

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +     +L   RL L+ +V  ++N+GL I+GV +P  M
Sbjct: 551 Q-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 589


>gi|323702604|ref|ZP_08114266.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532423|gb|EGB22300.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 561

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 208/561 (37%), Positives = 312/561 (55%), Gaps = 43/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           IVIE PR+  HG  +TN AM L+R   + P  IAE +V  + +    V  V IAG GFIN
Sbjct: 37  IVIEVPREKEHGDFATNLAMQLARSAKMAPRKIAEAVVENLDLAGTRVARVEIAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL PS++  ++  IV     YGR  +G G KV +EFVSANPTG +H+G+ R A +GD+L
Sbjct: 97  FYLEPSWVYDVVPLIVQEDRNYGRVELGNGRKVQVEFVSANPTGLLHMGNARGAALGDSL 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++ F+GY V+REYYINDAG QI     S+  RY Q L   D  +PE  Y G  +    
Sbjct: 157 AAILDFAGYRVSREYYINDAGNQIENFGRSLEVRYLQQL-GQDIPMPEEGYHGEDIIDTV 215

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K   +K+   L+N         +  Y+++  +  IR+ L    + +D++ SE   H  D 
Sbjct: 216 KGYLNKHGDGLVNVDSATRRQTLAAYALKEKLTHIRNTLLDFGVVYDVWFSEQSLH--DS 273

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   I+ L  +GY+YE                    L F++T  GD+ D  +++S+G 
Sbjct: 274 GAIDRTINELRERGYIYE----------------HENALWFKATEFGDEKDEVVVRSNGI 317

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY + K+ERGFD +I + G+DH G+V R++    A+   + ++ V+L +LVR
Sbjct: 318 PTYFAADIAYHRNKFERGFDWVIDIWGADHHGHVNRMKGSMEALGYSRDKLEVILMQLVR 377

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L+R G  ++MSKR G F+TL  +++EVG D+ R+  + R     LDFD    K Q+ +NP
Sbjct: 378 LFRGGEIVRMSKRTGQFVTLEELMEEVGRDAARYFFVMRSPDSHLDFDLDLAKSQTNDNP 437

Query: 451 VFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           VFY+QYA+AR  SI RQ ++         D+D  L            + +EL L+  LA+
Sbjct: 438 VFYIQYAHARICSILRQLQEQGRQLPAAADVDLTLLK----------EEAELGLLRKLAD 487

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P  I  A     P+++A YL+DLA  FH  ++  R       V  +N +L+  RL LV+
Sbjct: 488 FPTEIAAAAELLAPHRIARYLHDLAGQFHSFYNSYR-------VITDNEELSQARLVLVN 540

Query: 565 AVASIINSGLNIIGVESPNEM 585
            V  ++ + L ++G+ +P +M
Sbjct: 541 CVRIVLRNALGLLGLTAPEKM 561


>gi|121535669|ref|ZP_01667474.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305773|gb|EAX46710.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 556

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 209/562 (37%), Positives = 311/562 (55%), Gaps = 45/562 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +++E P     G  +TN AM  +R    +P  IA+ IV RI+  P ++   IAG GFIN 
Sbjct: 32  VMLEVPPQKEFGDYATNFAMQAARAAKTNPRVIAQAIVDRIQA-PWLEKAVIAGPGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YL P +L  +L  I+ +G  YG    G+G +V +EFVSANPTGP+HVGH R A VG  L 
Sbjct: 91  YLKPGWLYDLLQRILAAGENYGNTDYGRGRRVQVEFVSANPTGPLHVGHGRGAAVGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+  +GY+V  E+YINDAG+QI+ LA SV  RY + L     + PE  Y G  +    +
Sbjct: 151 NLLRAAGYDVEAEFYINDAGSQIDHLAASVNARYLE-LLGQPVEFPEDGYRGRDIIDTAQ 209

Query: 212 ELADKYSSE-LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            + D+  +  LL  P E+ L + K+ ++   +  +R+DL+A  +  D++ SE   H+   
Sbjct: 210 RIIDREGARYLLVSPAER-LAVFKELALSEKLAALREDLEAFGVTFDVWFSERTLHQ--T 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I    + L + G +YE                    L  RST  GDD DR +++ +G 
Sbjct: 267 GAIAATCELLKKSGDIYE----------------QDGALWLRSTAYGDDKDRVVIRDNGV 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY AAD+AY + K+ERGFD +I + G+DH GY+ R++A  AA+    A++ VL+ ++V 
Sbjct: 311 PTYLAADIAYHRNKFERGFDTVINIWGADHHGYIARVKAAIAALGYDPARLEVLILQMVS 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY++G  +KMSKR G  +TL  +++EVG D+ RF  + R     LDFD    K ++ ENP
Sbjct: 371 LYQNGELVKMSKRTGQGVTLAELIEEVGRDAARFFFIMRSADSQLDFDLDLAKSRTNENP 430

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-------SELQLIVHLA 503
           V+Y+QYA+AR  SIFRQA++             V P+E   D        +E+ LI  L 
Sbjct: 431 VYYIQYAHARIASIFRQAEEA---------GIAVRPEEWTEDKLACLTAETEIDLIKKLG 481

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           EYP  I  A   + P+++A Y++DLA +FH  ++  R       +      L   RL LV
Sbjct: 482 EYPDEITAAARERAPHRIARYVHDLAGLFHAFYNQCR-------IIGVEPALQNARLGLV 534

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++   L+I+GV +P +M
Sbjct: 535 TAVQRVLRHALSILGVTAPEKM 556


>gi|29655291|ref|NP_820983.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|39932160|sp|Q83A98|SYR_COXBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29542563|gb|AAO91497.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 592

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE IV 
Sbjct: 15  LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 74

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +V++E+VSA
Sbjct: 75  ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 134

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q  Y
Sbjct: 135 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 193

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230
               +LP+  Y G Y+  + + L  KY  +  +         PEE             W+
Sbjct: 194 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDVWV 253

Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              KD             ++ +++  I++DL+   + +D +  E    R     I++ +D
Sbjct: 254 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQEGLD 311

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + GYVYE                      FR+T +GD+ DR L++ +G  TYFAAD+
Sbjct: 312 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFAADV 355

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR    +
Sbjct: 356 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 415

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+QYA+
Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 475

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A +   P
Sbjct: 476 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMNYAP 532

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL ++G
Sbjct: 533 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 585

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 586 VSAPEEM 592


>gi|209364278|ref|YP_001425414.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|254783049|sp|A9KH27|SYR_COXBN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|207082211|gb|ABS77583.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 592

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P  +AE IV 
Sbjct: 15  LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMRPHALAEKIVE 74

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +V++E+VSA
Sbjct: 75  ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 134

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+ RY Q  Y
Sbjct: 135 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 193

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230
               +LP+  Y G Y+  + + L  KY  +  +         PEE             W+
Sbjct: 194 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 253

Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              KD             ++ +++  I++DL+   + +D +  E    R     I++ +D
Sbjct: 254 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQEGLD 311

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + GYVYE                      FR+T +GD+ DR L++ +G  TYFAAD+
Sbjct: 312 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFAADV 355

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   LYR    +
Sbjct: 356 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 415

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENPV+Y+QYA+
Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 475

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+ A +   P
Sbjct: 476 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMNYAP 532

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + LA YL  LA+ FH ++     N     ++ +N  L   RL L++AV  II +GL ++G
Sbjct: 533 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 585

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 586 VSAPEEM 592


>gi|167465619|ref|ZP_02330708.1| arginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 557

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 206/547 (37%), Positives = 309/547 (56%), Gaps = 48/547 (8%)

Query: 13  NYLKEIDCKIKVEKKILDRIV--------------IERPRDCAHGHLSTNAAMILSRPLG 58
           N L E+  K  V+K I D +V              +E P+D AHG  +TN AM L+R   
Sbjct: 2   NVLNEV--KTSVKKAIADAVVSAGIVDIEQLPAVTLEVPKDKAHGDFATNIAMQLTRIAK 59

Query: 59  LDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            +P  IAE ++A +  +   +D V IAG GFIN  ++ SYL +++  ++  G  YG+  +
Sbjct: 60  QNPRQIAEKLIAHLDKEAAYIDEVEIAGPGFINFRMNKSYLYQVIGQVLEQGNSYGKINM 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GKG +V +EFVSANPTG +H+GH R A VGD L +++  +G EVTREYYINDAG Q+  L
Sbjct: 120 GKGKRVQVEFVSANPTGSLHLGHARGAAVGDALCNVLEMAGCEVTREYYINDAGNQVLNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A S+  RY+QAL   ++++PE  Y G  +K   +ELA      LL   +E+ L   + Y 
Sbjct: 180 AKSIEARYRQAL-GQEAEMPEDGYYGEDIKGFAEELAKAEGDRLLALNDEERLVFFRKYG 238

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++  +  I+ DL    ++ D + SE   +  + + I D++  L   G+V+E         
Sbjct: 239 LEKELDKIKRDLGRFGVKFDEWFSETSIY--ENNMIDDVLKQLKDNGHVFE--------- 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                         R+T  GDD DR L+K+DG+YTY   D+AY + KYERG+D +I + G
Sbjct: 288 -------QDGATWLRTTDYGDDKDRVLIKNDGTYTYLTPDVAYHRNKYERGYDEIINIWG 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T+  ++DEV
Sbjct: 341 ADHHGYIPRMKAAVTALGYDANKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFP 473
           G D++R+    R     LDFD      +S ENPVFYVQYA+AR  SIFRQA++    + P
Sbjct: 401 GVDAIRYFFTMRSMDSHLDFDMDLAISKSNENPVFYVQYAHARICSIFRQAEEQGISMLP 460

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
               DL   + +  E+EFD     L+  +AE P  +  A     P++L  Y+Y+LAS FH
Sbjct: 461 AGQADL---SRLTAEAEFD-----LLRKMAELPEEVAIAAEQYAPHRLIRYVYELASQFH 512

Query: 534 GHWSHGR 540
            ++   R
Sbjct: 513 SYYKAER 519


>gi|169826545|ref|YP_001696703.1| arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168991033|gb|ACA38573.1| Arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 556

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 316/555 (56%), Gaps = 33/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           I +E P+D A+G  +TN AM L++     P  IAE I+  +     D++ + IAG GF+N
Sbjct: 34  IHLETPKDKANGDYATNIAMQLTKLAKKPPRAIAEAILENLDTAGTDIEKIDIAGPGFMN 93

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + +   +L  +++ ++  G +YGR+  G G K+ IEFVSANPTG +H+GH R A VGD+L
Sbjct: 94  ITVRKDFLTGVVTQVLEQGNDYGRSNAGAGEKIQIEFVSANPTGDLHLGHARGASVGDSL 153

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY V+REYYINDAG QIN LA S+  RY+QAL   D+++PE  Y G  +  + 
Sbjct: 154 CNVLDMAGYSVSREYYINDAGNQINNLAYSLEARYKQAL-GLDAEMPEDGYHGPDIIEIA 212

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +LA ++   +L   +E+     + + +   +  ++ DL    +  D++ SE   +  + 
Sbjct: 213 GKLAKEHGDAILAKSDEERFAFFRQHGLALELDKLKTDLANFRVNFDVWYSETSLY--EN 270

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   +D L   G+V+E                +     FRST  GDD DR L+K+DGS
Sbjct: 271 GKIEVALDKLKANGHVFE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 314

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +TY   D+AY + K  RGFD +I + G+DH GY+ R++A   A+   +  + V + ++V+
Sbjct: 315 FTYLTPDIAYHEDKIVRGFDKLINIWGADHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQ 374

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY++G   KMSKR G+ +T+R +V+EVG D+VR+  +       +DFD      QS ENP
Sbjct: 375 LYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMDFDLDLAVSQSNENP 434

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y QYA+AR  SI R A     +  F     N+    +E    E+ L+  + ++P+V+ 
Sbjct: 435 VYYAQYAHARISSILRSAN----EQGFAATSENLTLLTAE---KEIDLLKKIGDFPQVVA 487

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   + P+++A Y+ + A+ FH  ++        + + A+N++LT  RL L+ AV + I
Sbjct: 488 DAAKHRTPHRIANYIQETAAAFHSFYN------AEKVLDASNKELTEARLALITAVRTTI 541

Query: 571 NSGLNIIGVESPNEM 585
            + L +IGV +P +M
Sbjct: 542 ANALRLIGVSAPEKM 556


>gi|163783161|ref|ZP_02178155.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881495|gb|EDP75005.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 581

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 217/612 (35%), Positives = 334/612 (54%), Gaps = 83/612 (13%)

Query: 23  KVEKKILDRI-----------VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           ++EKKI D I            +E+PRD  HG L+TN A +LSR L   P  IA  +   
Sbjct: 4   QLEKKIQDAIRRLFSVEPPQFKVEKPRDEKHGDLATNVAFLLSRELKRAPNDIASQLAEE 63

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           +  D D++    A +GF+N+  S  +  +  S ++  G EY R  +G G K+ +EFVSAN
Sbjct: 64  LSRDADLEGA-EAVRGFVNVRFSREFFTEEFSKLLREGEEYYRENLGGGMKIQLEFVSAN 122

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTGP+H+GH R AVVGDTLA L  F GY VTREYYINDAG Q+  L +SV +RY + L+ 
Sbjct: 123 PTGPLHLGHGRGAVVGDTLARLFRFYGYNVTREYYINDAGRQVYLLGVSVLFRYLE-LFG 181

Query: 192 NDSDLPE-------GYYPGVYLKHVGKELADKYSSELLNFPEE----------------- 227
            + D PE         Y G Y+  + + L +     LL    E                 
Sbjct: 182 REKDRPEIKELFEKEGYKGQYVVELARLLREAVGELLLKGEVEEARKKILSHGYSFELGY 241

Query: 228 --KWLP-------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             K+ P       +   + + AMM  IR DL  ++I+ D++ SE   +  +   + ++I+
Sbjct: 242 IKKYRPNREPDVELCAAFGLDAMMDEIRRDLSEMDIEFDVWYSERSLY--ERGLVDELIE 299

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
             + +G VYE                +   L  +++  GDD DR L KSDGSYTYFA+D+
Sbjct: 300 EFSSRGLVYE----------------EEGALWLKTSEFGDDKDRVLRKSDGSYTYFASDI 343

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K++RGF+ ++ + G+DH GY+ R++A    +   +  + V L ++V+L+++G  +
Sbjct: 344 AYHWDKFKRGFEKVLDLWGADHHGYIPRVKASLKMLGIPEDWLEVYLIQMVKLFKEGKEV 403

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSKRAG+F+TLR +VDEVG+D+VR + L +++   LDFD  +VKE+S ENPVFYVQYA+
Sbjct: 404 KMSKRAGNFVTLRELVDEVGADAVRLVFLTKRSDTPLDFDVDRVKEKSSENPVFYVQYAH 463

Query: 459 ARCRSIFRQ-----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           AR   +FR+      KD   + DF  F + +       + +EL+L+  +      + + T
Sbjct: 464 ARISGVFREFRERTGKDPEKE-DFSEFLKELK------EDAELKLMRKVLMMKDELMDVT 516

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + ++P+ + + L DLA  FH +++H R       +  ++  L   R+ L+  + S I   
Sbjct: 517 LKRDPHLITYALIDLAGTFHNYYNHHR-------IIGSDHNLMFGRIALLKGIRSAIRIS 569

Query: 574 LNIIGVESPNEM 585
           L +IGV +P +M
Sbjct: 570 LKLIGVSAPEKM 581


>gi|313894766|ref|ZP_07828326.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976447|gb|EFR41902.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 553

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 211/557 (37%), Positives = 299/557 (53%), Gaps = 39/557 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P +   G ++TN AM  +R     P  IAE+IV+ +  D  ++   IAG GFINL
Sbjct: 33  IVLEEPPEKDMGDVATNFAMQSARVFRKSPKAIAEIIVSYLTGDW-LEHTEIAGPGFINL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           YL PS    +L  ++V+G  YG+        +V +E+VSANPTGP+HVGH R A VG  L
Sbjct: 92  YLKPSVYADMLRGVLVAGEAYGQLPARADAPRVQVEYVSANPTGPLHVGHGRGAAVGSAL 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+  +GY V  EYY+NDAG Q+N LA+SV  RY + L       PE  Y G  +    
Sbjct: 152 VKLLRAAGYAVDSEYYVNDAGNQMNLLAVSVNARYLE-LLGQAVTFPENGYHGADITETA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + DK   + L  PEE+ L I +D + +  +  +++DL    +  D + SE   H   P
Sbjct: 211 RRIIDKDGDKYLALPEEERLRIFQDVAYREKLAALKEDLADFGVTFDRWFSERTLH---P 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSD 328
             +R  +D L  +G  Y                  RK   +  RST  GDD DR + + +
Sbjct: 268 DAVRRAVDELLARGTAY------------------RKDGAVWLRSTDYGDDKDRVIFRDN 309

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TY AAD+AY   KY RG+  +I + G+DH GYV R++A  AA+    AQ+ VL  ++
Sbjct: 310 GVPTYLAADIAYHDDKYRRGYGRLINIWGADHHGYVARVKAAMAALGHDPAQLTVLFLQM 369

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V LYRDG  +K+SKR G+ +TLR +++EVG D+ R+  + R     LDFD    K++S E
Sbjct: 370 VSLYRDGDLVKLSKRTGETVTLRELMEEVGVDAARYFFIMRSLDSQLDFDLDLAKKRSNE 429

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA+AR  SIFRQA ++       L P +        + +E+ LI  LA YP  
Sbjct: 430 NPVYYVQYAHARISSIFRQAGEL------GLMPADGAELSLLKEDTEIALIKKLAAYPEE 483

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A     P ++A Y Y+LA  FH  ++  R       +    + L   RL LV A   
Sbjct: 484 IARAAAEYAPQRIARYSYELAGAFHSFYNQCR-------IVGQEKPLASARLALVTATRH 536

Query: 569 IINSGLNIIGVESPNEM 585
           +I   L I+GV +P +M
Sbjct: 537 VIRHSLGILGVSAPEQM 553


>gi|322382230|ref|ZP_08056143.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153811|gb|EFX46179.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 555

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/517 (38%), Positives = 299/517 (57%), Gaps = 32/517 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87
           L  + +E P+D AHG  +TN AM L+R    +P  IAE ++A +  +   +D V IAG G
Sbjct: 28  LPAVTLEVPKDKAHGDFATNIAMQLTRIAKQNPRQIAEKLIAHLDKEAAYIDEVEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  ++ SYL +++  ++  G  YG+  +GKG +V +EFVSANPTG +H+GH R A VG
Sbjct: 88  FINFRMNKSYLYQVIGQVLEQGNSYGKINMGKGKRVQVEFVSANPTGSLHLGHARGAAVG 147

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L +++  +G EVTREYYINDAG Q+  LA S+  RY+QAL   ++++PE  Y G  +K
Sbjct: 148 DALCNVLEMAGCEVTREYYINDAGNQVLNLAKSIEARYRQAL-GQEAEMPEDGYYGEDIK 206

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              +ELA      LL   +E+ L   + Y ++  +  I+ DL    ++ D + SE   + 
Sbjct: 207 GFAEELAKAEGDRLLALNDEERLVFFRKYGLEKELDKIKRDLGRFGVKFDEWFSETSIY- 265

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            + + I D++  L   G+V+E                       R+T  GDD DR L+K+
Sbjct: 266 -ENNMIDDVLKQLKDNGHVFE----------------QDGATWLRTTDYGDDKDRVLIKN 308

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DG+YTY   D+AY + KYERG+D +I + G+DH GY+ R++A   A+     ++ VL+ +
Sbjct: 309 DGTYTYLTPDVAYHRNKYERGYDEIINIWGADHHGYIPRMKAAVTALGYDANKLTVLIAQ 368

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V L+++G  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD      +S 
Sbjct: 369 MVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAISKSN 428

Query: 448 ENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           ENPVFYVQYA+AR  SIFRQA++    + P    DL   + +  E+EFD     L+  +A
Sbjct: 429 ENPVFYVQYAHARICSIFRQAEEQGISMLPAGQADL---SRLTAEAEFD-----LLRKMA 480

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           E P  +  A     P++L  Y+Y+LAS FH ++   R
Sbjct: 481 ELPEEVAIAAEQYAPHRLIRYVYELASQFHSYYKAER 517


>gi|283850760|ref|ZP_06368047.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574003|gb|EFC21976.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 552

 Score =  353 bits (907), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 206/564 (36%), Positives = 320/564 (56%), Gaps = 45/564 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE-LIVARIKIDPDVDSVFIAGKGFI 89
           +  IE PRD AHG L+TN A++ ++   + P  +AE L  A +  D  +  V +AG GF+
Sbjct: 25  KTTIEPPRDKAHGDLATNVALVAAKDAKMPPRALAEHLRQALLAADTGLAEVSVAGPGFL 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+  +P++ ++ +  ++  G  YG   IG+GTK+ +EFVSANPTGP+H+GH R A VGD 
Sbjct: 85  NVTFAPAFWQQTVLDVLEQGDRYGLLDIGQGTKIQVEFVSANPTGPLHIGHGRGAAVGDC 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G+ V  EYYINDAG Q+  L LS+ +RY++ L    ++ PE YY G Y+K +
Sbjct: 145 LARVLRAAGFTVETEYYINDAGRQMRILGLSILYRYRELLGEPVTE-PEDYYRGDYVKDL 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             +L D+    LL   EE      + +  + ++  IR DL+   + HD++  E       
Sbjct: 204 AGQLIDREGRGLLALSEEAATDACRLHGEKEILAGIRKDLQDFRVHHDVWFPESKLLAA- 262

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +    D+L  +   Y               D D     F +T  GDD DR L+KS G
Sbjct: 263 -GAVERTFDDLRAKNLAY---------------DKD-GAFWFATTTFGDDKDRVLVKSGG 305

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCEL 388
             TYFA+D+AY   K+ RGFD ++ + G+DH GYV R++A  AA+  + +A + V+L +L
Sbjct: 306 ELTYFASDIAYHDDKFHRGFDVVVDIWGADHHGYVPRMKACVAALGRDPEASLKVILVQL 365

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L + G  I MS RAG F TL  VV EVG+D+ RFM L RK+   LDFD   V ++S +
Sbjct: 366 VNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMFLSRKSDSHLDFDLDAVTKKSMD 425

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE------FDTS-ELQLIVH 501
           NPV+YVQYA+AR RS+F +A +           R ++P  +        DT+ +L+L+  
Sbjct: 426 NPVYYVQYAHARVRSVFAKAAE-----------RGLVPDAASPALLARLDTAEDLELLKL 474

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L +YP  +  A  +  P+ ++FYL +LA   H +++        + + A +  +T  R++
Sbjct: 475 LEQYPDTVAAAARSFAPHLVSFYLRELAGKLHRYYTVN------QVLGAGDEAVTAARMR 528

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+ AVA ++ +GL ++GV +P++M
Sbjct: 529 LLQAVALVVKNGLGLLGVSAPDKM 552


>gi|256829388|ref|YP_003158116.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256578564|gb|ACU89700.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 551

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 206/583 (35%), Positives = 319/583 (54%), Gaps = 40/583 (6%)

Query: 10  RLKNYLKEIDCKIKVEK--KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE- 66
           + KNY+ E    +   K   +  +  IE P+   HG ++TN  M++ +  G +P T+AE 
Sbjct: 2   KAKNYISEKLTALMAAKGQALPAKTTIEAPKSEQHGDMATNITMVMPKEKGQNPRTVAEA 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           L    + + P+++S+ IAG GFIN    P + +++  + + +  ++GR  +G+G KV +E
Sbjct: 62  LKTELLAMCPEIESIEIAGPGFINFTFKPVFWQEVALAALENKADFGRIDVGQGRKVQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A VGD+L  ++ F+G+EV  EYY+NDAG Q+  L L+V+ RYQ
Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLTRILRFTGHEVETEYYLNDAGRQMRLLGLAVWVRYQ 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QA    +   PE  Y G Y+K +   L  +    LL+ PEE+ L +  +  +  ++  I+
Sbjct: 182 QAC-GIEIPFPEDCYRGDYIKDISAALLAEKGKALLDLPEEEALDLCYERGMTDILNGIK 240

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    ++H  + SE      D   +   ++ L  +G  YE                  
Sbjct: 241 QDLIDFRVEHQHWFSEKSLV--DGGQVEASLNRLLAEGRAYE----------------KD 282

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FRST  GDD DR L KSDG  TYFA+D+AY   K  RGFD M+ + G+DH GYV R
Sbjct: 283 GALWFRSTDHGDDKDRVLRKSDGLLTYFASDIAYHDNKIARGFDMMVDIWGADHHGYVPR 342

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+ + +  + V+L +LV L + G  I MS RAG F TL  V  EVG D+ RF+ 
Sbjct: 343 MKAAIEALGKDRESLQVILVQLVNLIQGGEQIAMSTRAGKFETLADVCAEVGVDAARFIF 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483
           L RK+   LDFD   VK+QS +NPV+YVQYA+AR  S+ R+A++     P+    L    
Sbjct: 403 LSRKSDSHLDFDLDVVKQQSMDNPVYYVQYAHARISSLMRKAEEQGVALPEPSGALMALL 462

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS-HGREN 542
             P++         L   L  +   +E A     P+ +++YL +LA + H +++ H    
Sbjct: 463 TTPEDK-------ALFKALDAFEDTLELAARTLSPHHVSYYLMELAGLLHRYYTVH---- 511

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +  +++ L   R+ L  AVA ++ +GL+++GV +P  M
Sbjct: 512 ---HILSGDDQALLQARILLFQAVAGVLKAGLDLLGVNAPERM 551


>gi|317152002|ref|YP_004120050.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942253|gb|ADU61304.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 547

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 213/561 (37%), Positives = 320/561 (57%), Gaps = 42/561 (7%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D+ VIE P+D   G +S N AM+L++  G  P  IAE I A +  DP +  V IAG GF+
Sbjct: 24  DKGVIEPPKDRQFGDMSVNVAMMLAKQAGKPPRAIAEEIAAAMADDPRIARVDIAGPGFL 83

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N   +P +  + +  +  +G  YG + +GKG +V +E+VSANPTGP+H+GH R A +GD+
Sbjct: 84  NFTFAPGFWHETIGVVREAGQGYGASDLGKGVRVQVEYVSANPTGPLHIGHGRGAALGDS 143

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +M  +GYEV  EYY+NDAG Q+  L  S+++R + AL   D   PE YY G Y+  +
Sbjct: 144 LVRIMEKAGYEVEAEYYVNDAGRQMRILGSSIWYRLK-ALSGRDVAEPEDYYRGDYIIGI 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +++    +  +L+  E+  + I +D  +  ++  IR+DL+A  ++HD++ SE       
Sbjct: 203 ARDVL-AANPGILDMDEKDAVEICQDRGMNDILDGIREDLRAFGVRHDVWFSEK------ 255

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
                    +L   G V E      +S    + D       FRST  GDD DR L KS G
Sbjct: 256 ---------SLVADGLVDETFADLRESGLGFEQD---GAFWFRSTQFGDDKDRVLRKSSG 303

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYFA+D+AY   K++RGFD ++ + G+DH GYV R+ A   A+  KK  ++V+L  LV
Sbjct: 304 DTTYFASDIAYHDHKFKRGFDLVVDIWGADHHGYVPRMMAACEALG-KKGGLHVILVNLV 362

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG P+ MS RAG+F TL+ VVDEVG+D+ RFM L RK+   LDFD   VK+++ +N
Sbjct: 363 NLLRDGEPVAMSTRAGEFETLKDVVDEVGADAARFMFLSRKSDSRLDFDLELVKQKTMDN 422

Query: 450 PVFYVQYAYARCRSIFRQAKD-----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           PVFYVQYA+AR  S+  +A +       PD         +   ++E+D   L+L   L +
Sbjct: 423 PVFYVQYAHARICSLNAKAAEAGVAPAGPD------KAALALLDTEYDLDVLRL---LDQ 473

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP  +E+A   Q P+ ++ YL +LAS  H ++++         V + +  +   RL L+ 
Sbjct: 474 YPDYVESAARTQSPHLISTYLQELASTLHRYYTNCH-------VLSADPAVASARLMLLG 526

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA ++  GL ++GV +P  M
Sbjct: 527 CVAGVVRDGLGLLGVSAPESM 547


>gi|320530137|ref|ZP_08031207.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137570|gb|EFW29482.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 553

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 213/561 (37%), Positives = 299/561 (53%), Gaps = 47/561 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P +   G ++TN AM  +R     P  IAE+IV+ +  D  ++   IAG GFINL
Sbjct: 33  IVLEEPPEKDMGDVATNFAMQSARVFRKSPKAIAEIIVSYLTGDW-LERTEIAGPGFINL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           YL PS    +L  ++V+G  YG+        +V +E+VSANPTGP+HVGH R A VG  L
Sbjct: 92  YLKPSVYADMLRGVLVAGEAYGQLPARADAPRVQVEYVSANPTGPLHVGHGRGAAVGSAL 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+  +GY V  EYY+NDAG Q+N LA+SV  RY + L       PE  Y G  +    
Sbjct: 152 VKLLCAAGYAVDSEYYVNDAGNQMNLLAVSVNARYLE-LLGQAVTFPENGYHGADITETA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + DK   + L  PEE+ L I +D + +  +  +++DL    +  D + SE   H   P
Sbjct: 211 RRIIDKDGDKYLALPEEERLRIFQDVAYREKLAALKEDLADFGVTFDRWFSERTLH---P 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSD 328
             +R  +D L  +G  Y                  RK   +  RST  GDD DR + + +
Sbjct: 268 DAVRRAVDELLARGTAY------------------RKDGAVWLRSTDYGDDKDRVIFRDN 309

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TY AAD+AY   KY RG+  +I + G+DH GYV R++A  AA+    AQ+ VL  ++
Sbjct: 310 GVPTYLAADIAYHDDKYRRGYGRLINIWGADHHGYVARVKAAMAALGHDPAQLTVLFLQM 369

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V LYRDG  +K+SKR G+ +TLR +++EVG D+ R+  + R     LDFD    K++S E
Sbjct: 370 VSLYRDGDLVKLSKRTGETVTLRELMEEVGVDAARYFFIMRSLDSQLDFDLDLAKKRSNE 429

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NP +YVQYA+AR  SIFRQA ++       L P +        + +E+ LI  LA YP  
Sbjct: 430 NPAYYVQYAHARISSIFRQAGEL------GLTPADGAELALLKEDTEIALIKKLAAYPEE 483

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVH 564
           I  A     P ++A Y Y+LA  FH  ++     GRE P           L   RL LV 
Sbjct: 484 IARAAAEYAPQRIARYSYELAGAFHSFYNQCRIVGREKP-----------LASARLALVT 532

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   +I   L I+GV +P +M
Sbjct: 533 ATRHVIRHSLGILGVSAPEQM 553


>gi|88608193|ref|YP_505950.1| arginyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|109895008|sp|Q2GEZ6|SYR_NEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88600362|gb|ABD45830.1| arginyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 570

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 212/587 (36%), Positives = 327/587 (55%), Gaps = 25/587 (4%)

Query: 6   DFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           D   RL N L E+   I    + +++L   +   P+   +G  ST  + ++++ + L   
Sbjct: 2   DLFLRLGNVLTEVVTSIFGVTLSEQVL---LWNSPKKREYGDFSTAISFLIAKEVRLSLH 58

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +A  I   ++   D+  +V +A  GFIN++L+     + L+++      YG + IG   
Sbjct: 59  EVACSIADGLRSFKDLFKNVSVASGGFINVFLTSDTWSEFLAAVSDDAGGYGFSDIGHAV 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+GH R AV+ D  A L+   G+ +TREYYINDAG QI+ L  SV
Sbjct: 119 PLNLEFVSANPTGPLHLGHIRGAVLFDIFAELLDKFGFSLTREYYINDAGKQIDLLVYSV 178

Query: 182 FWRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQ 239
           F R+ + L   +SD  P   Y G Y++ +   L   +   + +  E K      ++  + 
Sbjct: 179 FVRFCEQLRKKESDNFPSNCYAGDYIRDIASYLISTFPDSVKDTTELKSFSDTFREVILS 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M +I+ DL  L I +D ++ E + H G+   I  +I  L  +GY+ E  LP PK K+ 
Sbjct: 239 LTMDMIKSDLAKLGISYDCYVREKELHEGNY--IEKVIAVLDEKGYLDEEELPSPKGKSG 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
               ++R+Q +F ST  GDD +R L K DGS+TYFA+D+AY   K ERGF++MI  +G+D
Sbjct: 297 DW--VERRQKVFLSTKFGDDTNRALQKVDGSWTYFASDVAYHYHKLERGFNHMIVGLGAD 354

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VG 418
           H+GYVKRL  V  A+S   A+I++ L  LV L+R+G P+K+SKR GD ITL  V++  + 
Sbjct: 355 HAGYVKRLSGVVEALSGGDARIDIKLYNLVNLFRNGKPVKLSKRNGDLITLDDVLESGIT 414

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              +RF ML + +  +LDFD  K    S +NP+FYVQYA+ARC S+ R+           
Sbjct: 415 VSEIRFAMLTKSSEIVLDFDLDKFVRASYDNPLFYVQYAHARCSSLLRKRG--------- 465

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             P          +  EL L+V LA+ P +++   ++ E +KL FYL+++A  FH  W+ 
Sbjct: 466 --PSAKCDAAMLVEKQELDLMVTLAKLPSLLKVIVVSGEVHKLTFYLHEVAERFHALWNA 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G    + RF+  +  +LT  RL LV AV + + S L ++ +E    M
Sbjct: 524 GMIENKFRFIIEDEPELTNARLILVKAVKNTLASVLKVMKIEPAERM 570


>gi|304311986|ref|YP_003811584.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797719|emb|CBL45941.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 586

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 211/617 (34%), Positives = 322/617 (52%), Gaps = 77/617 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S LK  +  +    ++  ++     IER RD  HG  ++N AM+L++P GL P  +A+ +
Sbjct: 7   SLLKAAVAHLQAAHQLPSELSPTYQIERTRDKQHGDFASNLAMMLAKPAGLKPRDLAQQL 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V  +  DP +    IAG GFIN YL      +I+  I+  G ++G + +G G  + +EFV
Sbjct: 67  VNALPADPAIQKTEIAGPGFINFYLQDGSQYQIVPQILSQGAKFGHSKVGAGQYIQVEFV 126

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+HVGH R A  G TLA+L+   G+ V REYY+NDAG Q+N LA SV+ RY + 
Sbjct: 127 SANPTGPLHVGHGRGAAYGATLANLLDAVGFRVHREYYVNDAGRQMNILATSVWLRYLE- 185

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-------------- 234
           L     + P   Y G Y+  +        S  +LN   + WL  V+              
Sbjct: 186 LCGVSFNFPSNGYKGGYILEI--------SQAVLNQAGQTWLRSVEAVFQDIPADEPAGG 237

Query: 235 --------------------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                                     D ++ +++  IRDDL+   +++  + SE      
Sbjct: 238 DKEEHIDSLIERAKQLLGKDGYKVFFDAALDSILGDIRDDLREFGVEYTEWFSEMSLT-- 295

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D   ++  ID L   G +YE                    + FRST  GDD DR + + +
Sbjct: 296 DSGSVQRAIDRLQTNGKLYE----------------KDGAIWFRSTEYGDDKDRVVARDN 339

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TYFA+D+AY   K+ERGFD +I V G+DH GY+ R++A  +A+     ++ VLL + 
Sbjct: 340 GQTTYFASDIAYHMNKFERGFDRVINVWGADHHGYIARVKAALSALGYDPEKLTVLLVQF 399

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             LYR G  ++MS R+G F+TLR + +EVG+D+ RF  + RK+ + +DFD    K QSK+
Sbjct: 400 AILYRGGERVQMSTRSGSFVTLRELREEVGNDAARFFYVTRKSEQHMDFDLDLAKSQSKD 459

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NP++Y+QYA+AR  SI ++A       D +    ++   ++++   E  L+  LA+YP +
Sbjct: 460 NPIYYIQYAHARVCSILKKAAAESAPWDRESGLAHLHLLDNDY---EQGLLNQLAKYPEL 516

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E A +  EP++LA YL DLA  FH  W +  +      V   +  L   RL L  A+  
Sbjct: 517 LERAALQYEPHQLAQYLRDLAGEFHS-WYNAHK------VIIEDANLRNARLTLSEAIRQ 569

Query: 569 IINSGLNIIGVESPNEM 585
           +IN+GL ++GV +P  M
Sbjct: 570 VINNGLTLLGVSAPESM 586


>gi|134301014|ref|YP_001114510.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189083532|sp|A4J9D2|SYR_DESRM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134053714|gb|ABO51685.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 561

 Score =  352 bits (904), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 207/569 (36%), Positives = 320/569 (56%), Gaps = 37/569 (6%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVD 79
           K +V K  +  ++IE PR+  HG  +TN AM L++P  + P  IAE I+  + + +  V+
Sbjct: 26  KGQVNKLEIPEVIIEVPREKGHGDFATNLAMQLAKPAKMAPRKIAEAIIENLDLANTQVE 85

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
            V IAG GFIN YL PS++  ++  I+     YGR  +G G +V +EFVSANPTG +H+G
Sbjct: 86  RVEIAGPGFINFYLQPSWVHGVIPMIIQEDRNYGRLELGDGQRVQVEFVSANPTGLLHMG 145

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           + R A +GD+LAS++ F+GY V+REYYINDAG QI     S+  RY Q L   D  LPE 
Sbjct: 146 NARGAALGDSLASILDFAGYRVSREYYINDAGNQIENFGKSLEVRYLQQL-GQDIQLPEE 204

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            Y G  +    K   +K    LL+  +      +  Y++Q  +  IR+ L    + +D++
Sbjct: 205 GYHGEDIIDTVKGYINKNGRGLLDADQTTRRKTLAAYALQEKLTHIRNTLLDFGVVYDVW 264

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE   H  D   I++ +D L ++G++YE                    L F++T  GD+
Sbjct: 265 YSEQALH--DSGAIQETLDELRQKGFIYE----------------QENALWFKATAFGDE 306

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            D  +++S+G  TYFAAD+AY K KY+RGFD +I + G+DH G+V R++    A+   + 
Sbjct: 307 KDEVVVRSNGIPTYFAADIAYHKDKYKRGFDRVIDIWGADHHGHVNRMKGSMEALGHNRD 366

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            + ++L +LVRL R G  ++MSKR G F+TL  +V+EVG D+ R+  + R     L+FD 
Sbjct: 367 NLQIILMQLVRLLRGGEVVRMSKRTGQFVTLEELVEEVGRDAARYFFVMRSPDSHLEFDL 426

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQESEFDTSEL 496
              K Q+ +NPVFY+QYA+AR  SI RQ ++     P++         I      + +EL
Sbjct: 427 DLAKSQTNDNPVFYIQYAHARICSILRQLQEQGRPLPEI-------AAINPTVLKEEAEL 479

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  LA++P  I  A     P+++A YL+DLA +FH  ++  R       V   N  ++
Sbjct: 480 ELLRKLADFPSEIAAAAEMMAPHRIARYLHDLAGLFHSFYNSHR-------VITENEAIS 532

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL LV  V  ++ + L ++G+ +P +M
Sbjct: 533 EARLVLVQCVRIVLRNALGLLGLTAPEKM 561


>gi|299537939|ref|ZP_07051225.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726521|gb|EFI67110.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 555

 Score =  352 bits (904), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 195/556 (35%), Positives = 316/556 (56%), Gaps = 35/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           I +E P+D A+G  +TN AM L++     P  IAE I+  +     D++ + IAG GF+N
Sbjct: 33  IHLETPKDKANGDYATNIAMQLTKLAKKPPRAIAEAILENLDTTGTDIEKIDIAGPGFMN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + +   +L ++++ ++  G +YGR+  G G KV +EFVSANPTG +H+GH R A VGD+L
Sbjct: 93  ITVRKDFLTEVVTQVLEQGTDYGRSNAGAGEKVQVEFVSANPTGDLHLGHARGASVGDSL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY V+REYYINDAG QIN LA S+  RY+QAL    +++PE  Y G  +  + 
Sbjct: 153 CNVLDMAGYSVSREYYINDAGNQINNLAYSLEARYKQAL-GMKAEMPEDGYHGQDIIDIA 211

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +LA ++   +L   +++     + + +   +  ++ DL    +  D++ SE   +  + 
Sbjct: 212 GKLAKEHGDAILAKSDDERFAFFRQHGLALELDKLKTDLANFRVNFDVWYSETSLY--EN 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   +D L   G+V+E                +     FRST  GDD DR L+K+DGS
Sbjct: 270 GKIEVALDKLKANGHVFE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +TY   D+AY + K  RGFD +I + G+DH GY+ R++A   A+   +  + V + ++V+
Sbjct: 314 FTYLTPDIAYHEDKIVRGFDKLINIWGADHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQ 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY++G   KMSKR G+ +T+R +V+EVG D+VR+  +       +DFD      QS ENP
Sbjct: 374 LYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMDFDLDLAVSQSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+Y QYA+AR  SI R A +  F      L   N++  E E D     L+  + ++P+V+
Sbjct: 434 VYYAQYAHARISSILRSANEQGFAATTEHL---NLLTAEKEID-----LLKKIGDFPKVV 485

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A   + P+++A Y+ + A+ FH  ++        + + A+N++LT  RL L+ AV + 
Sbjct: 486 AEAAKHRTPHRIANYIQETAAAFHSFYN------AEKVLDASNKELTEARLALITAVRTT 539

Query: 570 INSGLNIIGVESPNEM 585
           I + L +IGV +P +M
Sbjct: 540 IANALRLIGVSAPEKM 555


>gi|323342451|ref|ZP_08082683.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463563|gb|EFY08757.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 546

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/554 (35%), Positives = 329/554 (59%), Gaps = 36/554 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +++E P +   G  STN AM L++ +G +P  IA +IV +++ +  V+S+ +AG GFIN 
Sbjct: 29  VMLEIPNNPEMGDYSTNIAMRLTKRVGKNPREIAGVIVEKLEDNEMVESISVAGPGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            + P+ L  +++ ++ +G +YGR+  G+G ++  E+VSANPTG +HVGH R A  GD+L+
Sbjct: 89  VMKPAVLGSVVNDVIEAGKDYGRSNAGEGIRLLNEYVSANPTGQLHVGHARGAAWGDSLS 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M+F+GY+V REYYIND G QI  L+ S++ RY+QA +  ++ LPE  Y G  +  +  
Sbjct: 149 RIMSFAGYDVLREYYINDLGNQILMLSHSLYARYKQA-FGMEAPLPEDGYHGPDIIEIAN 207

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++ +    + L+ PEE+W+P  K+  ++  ++ I++DL    ++ D ++SE   +  D  
Sbjct: 208 DVKETEGDKWLSAPEEEWVPYFKELGIKLELERIKEDLNTFGVEMDSWVSEKWLY--DDG 265

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + + ++ L  +G  +E                +   L  RST  GDD DR L+KSDGSY
Sbjct: 266 RVEESLEALKAKGVTFE----------------EDGALWLRSTDFGDDKDRVLIKSDGSY 309

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY   D+A    K ERG+ +++ + G DH GY+ R++A   A+      ++V + ++VRL
Sbjct: 310 TYLVPDIANHIYKLERGYTHLLNLWGGDHHGYIVRMQAALEALGHPNV-LDVDIIQMVRL 368

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             +G+ +KMSKR G+ + L  +VD++G D+ R+  + R  +  LDFD    +++S +NPV
Sbjct: 369 VDEGVEVKMSKRTGNALGLVELVDDIGVDATRYFFVSRALATPLDFDLGLARKKSNDNPV 428

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           FYVQYA+AR  SI RQA ++ P +D       VI Q +  +  E+ L+  + E+  V+ +
Sbjct: 429 FYVQYAHARICSILRQAGEV-PHVD-------VIDQLT--NPKEIALLKEINEFSSVVAD 478

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   +E +K+A Y+ DLAS FH  +        ++ +  +N +L   RL L+ AV   ++
Sbjct: 479 AAKKREVHKIANYVQDLASSFHSFYG------EVKVMDPSNPELQAQRLNLLVAVKITLS 532

Query: 572 SGLNIIGVESPNEM 585
           + LN+IGV +P +M
Sbjct: 533 NALNLIGVNAPEQM 546


>gi|330685904|gb|EGG97533.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 553

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 207/578 (35%), Positives = 318/578 (55%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  IK  K   D   I IE P+D  +G  STN AM+L++    +P  IA+ IV  +
Sbjct: 12  VEEIEASIKKAKLANDIPEIKIEIPKDVKNGDYSTNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G ++G+    K   + +E+VSAN
Sbjct: 72  DASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEESKNKNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGDTLA+++  +GY VTREYYINDAG QI+ LA S+  R+ +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLARSIETRFFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +  ++PE  Y G  +  +GK+LADK+  E+ ++ +++ L   +   V   M  ++ DL  
Sbjct: 192 DSHEMPEDGYNGKDIVEIGKDLADKHP-EIKDYSDDERLKTFRQLGVDYEMSKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N   D + SE   +  +   I++++  +   GY YE                       
Sbjct: 251 FNTHFDNWFSETSLY--EKGEIKEVLAKMNELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D+AY   K +RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NPV+Y QY +AR  SI +QAK    DI  D+DF          
Sbjct: 413 DTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDVDFSKIT------ 466

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +   ++L+  +AE+   IE+A  ++ P+++  Y+ DLAS FH  ++  +       
Sbjct: 467 ----NEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + LV AV   +N+ L ++GV +P  M
Sbjct: 516 VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPESM 553


>gi|115373269|ref|ZP_01460569.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310824517|ref|YP_003956875.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115369715|gb|EAU68650.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309397589|gb|ADO75048.1| Arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 592

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 199/571 (34%), Positives = 312/571 (54%), Gaps = 34/571 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFIN 90
            +E P++ AHG  S N AM+L++  G  P  IA+ IV  + +DP   V  V +AG GF+N
Sbjct: 31  TVEAPKNPAHGDWSVNVAMMLTKAEGKPPRDIAQAIVKGL-VDPQGIVTKVDVAGPGFLN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
             L     +++   ++ +G  +G       G +V +EFVSANPTGP+H+GH R A +GD 
Sbjct: 90  FTLKEQVHQQVAREVLQAGETFGHQAPKSTGKRVLVEFVSANPTGPVHIGHARGAFMGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A L+  +G++VTRE+YIND G Q+ TL  +V  RY+Q L+    +L EG YP  Y+  +
Sbjct: 150 VARLLEAAGHDVTREFYINDYGKQVETLGRTVHKRYRQ-LFGQQVELGEGEYPAEYVIDI 208

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K+  +    + L+ PE +WLP      ++  +K IR  L+  NI+HD+F SE   H   
Sbjct: 209 AKDWKEAVGDKYLHLPESEWLPEAMAVGIRENLKAIRATLQQANIRHDVFFSEASLH--T 266

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +  I+D   R+G  YE          +    SK  Q  D  R     R++  GDD D
Sbjct: 267 SGKVLAIVDEYKRRGATYEAAEAERTGEKVRHEDSKAAQYTDRQRGGTFLRTSQHGDDED 326

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           R +L+ DG+  Y  ADLAY + KY RGFD +I V G+DH+G+  R+ A    +     ++
Sbjct: 327 RIILRHDGTPVYLTADLAYHQEKYNRGFDRIIDVFGADHAGHTPRISAGMTLLGLDAKKL 386

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
             LL +LVR+ R G  +K+SKR G    L  ++ E G+D  RF+ L +  +   DFD   
Sbjct: 387 EFLLVQLVRITRGGEEVKVSKRKGTVFELEDLIHEAGADVCRFLFLVKTANSRFDFDLDL 446

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFP----RNVIPQESEFDTS 494
           VK+QSK+NPVFY QY +ARC SI ++A +    F  L+  L P    R  +P+       
Sbjct: 447 VKKQSKDNPVFYFQYGHARCASILKKAAEKGTPFVGLE-GLTPAHLARLTLPE------- 498

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           EL ++  +++ P V+ +A    EP+ + ++  +L + FH +++  + +P    + + + +
Sbjct: 499 ELSMLKKMSQLPDVVASAAERLEPHHVLYFCQELITDFHSYYTKYKTDP----IISGDSE 554

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            T  RL LV A+   + S   ++G+++P  M
Sbjct: 555 KTQGRLGLVAALKQTLRSAFALLGIQAPEYM 585


>gi|239636782|ref|ZP_04677784.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239598137|gb|EEQ80632.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 553

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 207/578 (35%), Positives = 318/578 (55%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  IK  +   D   I IE P+D  +G  STN AM+L++    +P  IA+ IV  +
Sbjct: 12  VEEIEASIKKAELANDIPEIKIEIPKDVKNGDYSTNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G ++G+    K   + +E+VSAN
Sbjct: 72  DASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEASKNKNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGDTLA+++  +GY VTREYYINDAG QI+ LA S+  R+ +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLARSIETRFFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N  ++PE  Y G  +  +GK+LADK+  E+ ++ +++ L   +   V   M  ++ DL  
Sbjct: 192 NSYEMPEDGYNGKDIVEIGKDLADKHP-EIKDYSDDERLKTFRQLGVDYEMSKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N   D + SE   +  +   I++++  +   GY YE                       
Sbjct: 251 FNTHFDNWFSETSLY--EKGEIKEVLAKMNDLGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D+AY   K +RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NPV+Y QY +AR  SI +QAK    DI  D+DF          
Sbjct: 413 DTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDVDFSKIT------ 466

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +   ++L+  +AE+   IE+A  ++ P+++  Y+ DLAS FH  ++  +       
Sbjct: 467 ----NEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + LV AV   +N+ L ++GV +P  M
Sbjct: 516 VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPETM 553


>gi|217967868|ref|YP_002353374.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336967|gb|ACK42760.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 550

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/555 (37%), Positives = 315/555 (56%), Gaps = 34/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++E P+   +G  +T  A+ +++     P  +AE I   IK  P V  + IAG GFIN 
Sbjct: 29  IIVETPKQKEYGDYATAVALQIAQKNKKPPRVVAEKISEYIKKSPFVKKIEIAGPGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+   L + L  ++   I+    +  K  K+ IEF S NPTGPMH+ H R   +GD+LA
Sbjct: 89  FLNDEALWETLR-LIRKDIDDFVKIPSKKKKIQIEFGSINPTGPMHIAHARGVTIGDSLA 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L    G+   +E+YINDAG QI+ L  S++ RY Q L   D  +PE  Y G YL  + K
Sbjct: 148 NLFKRIGWNTEKEFYINDAGNQIDLLGESLYARYMQLL-GYDYQVPEEGYHGYYLIELAK 206

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           EL ++  S++ +  E +     K+Y++  M++ I+  L    +++D++ SE   H  +  
Sbjct: 207 ELLNQ-KSQIESMDETEKKKFFKEYALSKMLEDIKTTLLNFGVEYDVWFSERTLH--ENG 263

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++++ L + GY YE                    L F ST  GD+ DR L+KSDG  
Sbjct: 264 KVKEVLEILRQNGYTYE----------------KDGALWFSSTKFGDEKDRVLIKSDGKA 307

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYF AD+AY   K +RGFD +I V G+DH G+V RL+    A+   K  + ++L ++VRL
Sbjct: 308 TYFLADIAYHLNKIQRGFDWIIDVWGADHHGHVTRLKGAIQALGYPKDILEIILVQMVRL 367

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            R    IKMSKR GDFITL+ + +EVG D++RF  L R     LDFD    K+QS ENPV
Sbjct: 368 MRGNEEIKMSKRTGDFITLKEIQEEVGKDAIRFFFLLRSPESQLDFDINLAKKQSVENPV 427

Query: 452 FYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +YVQYA+ARC SI + A+    +L D D    +++ +E E D     LI++L  YP  +E
Sbjct: 428 YYVQYAHARCCSILKNAETKGYNLADLDKADLSLLKEEKEKD-----LILNLLRYPERLE 482

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           + T   E ++L FYL +L+++FHG++   +       V + +++LT+ RL LV  V  II
Sbjct: 483 DITRTLEIHQLPFYLLNLSTLFHGYYDSYK-------VISEDKELTLARLVLVDCVRIII 535

Query: 571 NSGLNIIGVESPNEM 585
              L+I+GV +P +M
Sbjct: 536 KDALSILGVSAPEKM 550


>gi|299821825|ref|ZP_07053713.1| arginine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817490|gb|EFI84726.1| arginine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 556

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/566 (36%), Positives = 315/566 (55%), Gaps = 41/566 (7%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFI 83
           E +I D I++E P++  HG  STN AM L+R     P  IAE I+  I   D  +  + +
Sbjct: 27  ESEIPD-ILLEVPKEKQHGDYSTNIAMQLARVAKKAPKQIAEAIIKEIDTEDSLIRKIDV 85

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFIN ++  +YL +++  I+ +G  YG +  GKG K+ +EFVSANPTG +H+GH R 
Sbjct: 86  AGPGFINFFVDNAYLTELVPVILEAGDSYGESDFGKGQKIQLEFVSANPTGDLHLGHARG 145

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A +GD+LA++++ +G++V+REYYINDAG QIN L LS   RY +A    D   PE  Y G
Sbjct: 146 AAIGDSLANILSTAGFDVSREYYINDAGNQINNLVLSAEARYFEAC-GIDKPFPEDGYHG 204

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V +K +G +L +KY  + +   E++   + +  ++      +R DL+A  +  D + SE 
Sbjct: 205 VDIKELGNKLFEKYGDKYIEAEEQERRDVFRTEALAFETAKLRTDLEAFRVGFDNWFSES 264

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +    + I   ++ L + GYVYE                D    L R+T  GDD DR 
Sbjct: 265 SLYA--ENKILPTLEVLRKNGYVYE---------------QDGATWL-RTTDFGDDKDRV 306

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L+K+DGSYTYF  D+AY   K ERGFD +I + G+DH GY+ R+     A+     Q+ V
Sbjct: 307 LIKTDGSYTYFLPDIAYHLNKLERGFDILIDIWGADHHGYIPRMRGAIEALGYAPTQLEV 366

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            + +LV LY +G  +KMSKR G  +T+R +V+EVG D+VR+    R +   ++FD    K
Sbjct: 367 EIIQLVHLYENGEQVKMSKRTGKSVTMRDLVEEVGLDAVRYFFAMRSSDTHMNFDLGLAK 426

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             S ENPV+YVQYA+AR  SI R  ++    +   LD  L     +  E+E D     L+
Sbjct: 427 ATSNENPVYYVQYAHARISSILRSGEEQGIVVSDGLDVSL-----LQTETEID-----LL 476

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L E+  V+  A   + P+++  YL DLAS FH  ++        + +  +   ++  R
Sbjct: 477 KVLGEFSDVVAEAAAKRAPHRIVRYLNDLASAFHRFYNTN------KVLNPDEADISKAR 530

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L+ A    + +GL ++GV +P +M
Sbjct: 531 LALIKAAQVTLRNGLKLLGVSAPEKM 556


>gi|254491079|ref|ZP_05104260.1| arginyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463592|gb|EEF79860.1| arginyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 585

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 207/589 (35%), Positives = 314/589 (53%), Gaps = 61/589 (10%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  I IER +D  HG  + N AM+L++P  ++P  IA  IV  +     V  V IAG GF
Sbjct: 26  LPEIQIERTKDKTHGDFACNIAMMLAKPAKMNPRQIATDIVEALPTSDVVTQVEIAGPGF 85

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN +LS    ++++  I+    +YG++ IGKG KV +EFVSANPTGP+HVGH R A  G 
Sbjct: 86  INFFLSAEASQQVVKEILSKAEKYGQSQIGKGKKVQVEFVSANPTGPLHVGHGRGAAYGS 145

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            ++SL+  +G+ V REYY+NDAG Q++ L  SV+ RY QA     +  P   Y G Y+  
Sbjct: 146 VVSSLLNAAGFNVHREYYVNDAGRQMDILGTSVWLRYLQACGETIT-FPSNGYQGSYVLD 204

Query: 209 VGKELADKYSSEL------------LNFPE--------------------EKWLPIVKDY 236
           +  EL   ++ +              + P+                    E    IV D 
Sbjct: 205 IAAELKQTFAEQFRHPADAVFDGVPADEPQGGDKELHIDGLTNQAKQLLGEANYRIVFDK 264

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            + A++  IRDDL     ++D + SE      +   +   I+ L + G +YE        
Sbjct: 265 GLNAILGDIRDDLAEFGTEYDEWFSERSL--VESGEVEKAIEQLKQAGQLYE-------- 314

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   ++    F+ST  GD+ DR +++ +G  TYFA+D+AY   KY+RGFD +I + 
Sbjct: 315 --------EKGAWWFKSTDYGDEKDRVVIRDNGQATYFASDIAYHLNKYQRGFDEIIDIW 366

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R++A   A+ +   Q+ VLL +   LYR    + MS R+G+F+TLR + DE
Sbjct: 367 GADHHGYIPRVKASMQAMQQNVDQLKVLLVQFAVLYRGAEKVGMSTRSGEFVTLRQLRDE 426

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ RF  + R   + +DFD    K QS +NPV+YVQYA+AR  S+FRQ  +     D
Sbjct: 427 VGKDAARFFYVMRGADQHMDFDLELAKSQSNDNPVYYVQYAHARVCSVFRQLTERGHAWD 486

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                +++   +   +T E  L+  LA+YP ++E A +   P+ LA YL DLA  FH ++
Sbjct: 487 KATGEQHL---DRLTETHEDALMTMLAKYPEILETAALNHTPHLLAHYLTDLARDFHTYY 543

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        +F+  +N +L+  RL L+ AV  +I + L ++GV +P  M
Sbjct: 544 N------AHQFIVDDN-ELSQARLTLIEAVRQVIQNALTVMGVSAPESM 585


>gi|223983739|ref|ZP_03633910.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM
           12042]
 gi|223964285|gb|EEF68626.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM
           12042]
          Length = 548

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 200/573 (34%), Positives = 312/573 (54%), Gaps = 42/573 (7%)

Query: 20  CKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
           C I   K+  D       +VIE P++  HG  STNAAM L++ L  +P  IA+ ++  + 
Sbjct: 11  CIINAVKQAFDLDWESGDVVIEIPKEKIHGDYSTNAAMRLTKQLRQNPRMIAQQLIDHLD 70

Query: 74  I-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
           +    V    IAG GFIN ++  + L  ++  ++     YGR+  G+G KV++E+VSANP
Sbjct: 71  LKQGSVAKCEIAGPGFINFFMESASLASVIGVVLQENENYGRSDAGQGLKVDVEYVSANP 130

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +H GH R A +GD++  LM F+GY+VTREYY+NDAG QI  +ALS+  RY QA    
Sbjct: 131 TGDLHPGHARGAAMGDSVTRLMKFAGYDVTREYYVNDAGNQIRNMALSLQARYLQAC-GV 189

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           ++++PE  Y G  L  + ++L  +Y  +L +  + +     +   +QA +  ++ DL A 
Sbjct: 190 EAEVPEDGYHGPDLIKIAQDLKQEYGEDLAHKDKAETYSFFRQQGLQAELAKLKADLAAF 249

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            ++ D++ SE   +  D   +   ++ L  QG  YE                    L  R
Sbjct: 250 GVEFDVWTSEQSIY--DRGMVDKALNTLKAQGMTYES----------------EGALWLR 291

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +T  GDD DR L+KSDGSYTY   D+AY   K++RG+D +I   G+DH GY+ RL+A   
Sbjct: 292 TTDFGDDKDRVLVKSDGSYTYLTPDIAYHVDKFDRGYDKLIDFFGADHHGYIARLKAAVQ 351

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           ++ + K  + V + ++ R+ +DG   KMSKR G  + L+ +V+E G D+VR+  + R   
Sbjct: 352 SLGKNKDDLEVDIIQMARMVKDGEEFKMSKRTGKAVALKDLVEEAGVDAVRYFFVSRAAD 411

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +DFD    K+Q+ ENPV+Y QYA+AR  SI R   DI P  D       +I  E E D
Sbjct: 412 THMDFDIDMAKKQTNENPVYYAQYAHARMCSILRSGADI-PLADH----YELITHEKELD 466

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                L+ H+ E+   + +A   ++P+K+  Y+  LA +FH  ++        + +   N
Sbjct: 467 -----LLKHINEFASTVADAAKTRQPHKMCNYITRLAQLFHTFYAD------CKVLDRTN 515

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L+  RL LV A    + + L +IGV +P +M
Sbjct: 516 LELSAQRLALVKASEMTLRNALTLIGVSAPEKM 548


>gi|289551531|ref|YP_003472435.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181062|gb|ADC88307.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 555

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 210/580 (36%), Positives = 313/580 (53%), Gaps = 45/580 (7%)

Query: 15  LKEIDCKIKVEKKILDR----IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           + EI   IK  K I D+    I IE P+D  +G  STN AM+L++    +P  IA+ IV 
Sbjct: 12  INEIKTSIKSAKLIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKRNPREIAQAIVD 71

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
                   V  V IAG GFIN YL   YL  I+   +  G  YG     K  ++ +E+VS
Sbjct: 72  HFDTTKAHVKQVDIAGPGFINFYLDNHYLTAIIPEAISKGAHYGYASEPKNKRILLEYVS 131

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTG +H+GH R A VGD+LA+++  +GY+VTREYYINDAG QI  LA S+  R+ +AL
Sbjct: 132 ANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEAL 191

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            +    +PE  Y G  +  +GK+LA K+  E+ ++ +   L   +   V+  M  ++ DL
Sbjct: 192 GDTSHKMPEDGYNGKDIIEIGKDLAQKHP-EIKDYSDHDRLKTFRQLGVEYEMVKLKRDL 250

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              N   D + SE   +  D   I + +  +   GY YE      K   T          
Sbjct: 251 ADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE------KDGAT---------- 292

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             R++   DD DR L+KSDGSYTYF  D AY   K  RG D +I +MG+DH GY+ R++A
Sbjct: 293 WLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGADHHGYINRIKA 352

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                     ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R
Sbjct: 353 SLETFGVNSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMR 412

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVI 485
                 DFD    KEQS++NP++Y QYA+AR  SI +QA+    DI  D DF L   +  
Sbjct: 413 SPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTDADFSLITND-- 470

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                     + L+  +AE+ +VI+NA   + P++L  Y+ DLA+ FH  ++  +     
Sbjct: 471 --------KAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNAEK----- 517

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V  ++++ T   + L+ AV   +++ L ++GV +P  M
Sbjct: 518 --VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555


>gi|270159345|ref|ZP_06188001.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165835|ref|YP_003455973.1| arginine tRNA synthetase [Legionella longbeachae NSW150]
 gi|269987684|gb|EEZ93939.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859008|emb|CBJ12936.1| arginine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 586

 Score =  350 bits (898), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 207/591 (35%), Positives = 323/591 (54%), Gaps = 71/591 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I I+R +D AHG  ++N A++L++P    P  IAEL+V  I  DP V+ + IAG GFIN 
Sbjct: 30  IKIDRAKDSAHGDYASNLALVLAKPCRQSPRKIAELLVKAIPADPVVEKIEIAGAGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++  +   KI++  +  G  +G + IGK  KV +EFVSANPTGP+HVGH R A  G TL 
Sbjct: 90  FIHSNSRSKIIAEALEKGNRFGCSTIGKNQKVLVEFVSANPTGPLHVGHGRGAAFGATLG 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY+VT EYY+NDAG Q+N LA SV+ RY + L      +P   Y G Y+  + +
Sbjct: 150 NVLKAAGYDVTVEYYVNDAGRQMNILAASVWLRYLE-LSGEPVAIPANAYKGDYVSEIAQ 208

Query: 212 ELADKYSSE-----------------------------------LLNFPEEKWLPIVKDY 236
           EL  K++ E                                   LL+ P      +   +
Sbjct: 209 ELWLKHNREYVHPWATVIEGLPLDEPHGGDKEIYIDALVARMKILLSMPV---FSLFHQH 265

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++  +++ I+DDL    +++D + SE      +   I+  I  L   G+ +E        
Sbjct: 266 ALNTVLEDIQDDLAEFGVKYDNWFSEQSLF--EDGSIQKGIQALKDSGHTFE-------- 315

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L FR+T  GD+ DR L++++G  TYFA+D+AY   KY+RG+D +I + 
Sbjct: 316 --------KEGALWFRATDFGDEKDRVLVRANGHTTYFASDVAYHWNKYDRGYDRIIDIF 367

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ RL AV  A+   ++ ++VLL +   LYR    ++MS R+G F+TLR +  E
Sbjct: 368 GADHHGYITRLRAVVKALGHDESTLDVLLVQFAILYRGVERVQMSTRSGSFVTLRELRQE 427

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPD 474
           VG+D+ RF  + RK+ + +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+  +F D
Sbjct: 428 VGNDAARFFYVARKSEQHMDFDLDLAKSESNDNPVYYIQYAHARICSVLRQLKERGLFWD 487

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
               L   +++ QE      E  LI  ++ YP V+E A +  EP+++A+YL ++A+  H 
Sbjct: 488 QAMGLKHLDLLEQE-----HETHLISLISRYPEVVELAAVHCEPHQVAYYLREVANGLHS 542

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++     P L        +L   RL L+ AV  +I +GL ++GV +P  M
Sbjct: 543 YYN---AVPLL----CEQEQLRCARLCLLEAVRQVIYNGLGLLGVSAPESM 586


>gi|158523225|ref|YP_001531095.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|226701375|sp|A9A099|SYR_DESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158512051|gb|ABW69018.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 556

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 201/560 (35%), Positives = 305/560 (54%), Gaps = 39/560 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFIN 90
           I +E PR   HG  +TN AM+ +    + P  IAE IVA +     +     IAG GFIN
Sbjct: 30  IELEAPRFRDHGDFATNLAMVSASTQKMAPRKIAEAIVAHLADSAGILLKTEIAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++ P     +L  I      +G   +G G +V +EFVSANPTGP+HVGH R A VGD++
Sbjct: 90  FFICPEAWLPVLHRIHEDQERFGACDLGGGKRVQVEFVSANPTGPLHVGHGRGAAVGDSV 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++AF G++V REYY+NDAG QI TL  SV  R+++ L     D PE  Y G Y++ + 
Sbjct: 150 ARILAFCGWQVHREYYVNDAGNQILTLGRSVLLRWRE-LSGQAVDFPEDCYQGDYIRSIA 208

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +++  ++   L      + +      +   ++  IR DL   +I  D + SE      + 
Sbjct: 209 RQIDAEHRQALEKMESAEAVAFCARVAADQILDGIRRDLADFSITFDQWFSEKSLV--ET 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +  L   G VYE                    L F ++  GD+ DR +++++G 
Sbjct: 267 GAVETTLARLKETGVVYE----------------SEGALWFATSRFGDEKDRVVVRNNGE 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY K K++RGF+ +I V G+DH GY+ R++A   AV   +  ++V+L +LV 
Sbjct: 311 ATYFASDIAYHKNKFDRGFNRVIDVWGADHHGYIPRVKAAIGAVGRSQDDLDVILVQLVA 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R+G P+ MS R+G+F+TL+ V +EVG+D+ RF+ L R     LDFD    K++S +NP
Sbjct: 371 LLREGQPVSMSTRSGEFVTLKEVTNEVGADAARFIFLSRHYDSPLDFDLELAKKKSNDNP 430

Query: 451 VFYVQYAYARCRSIFRQAKD-----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           V+YVQY +AR  S+ ++A +         +D     R   P+       E+ L+  LA Y
Sbjct: 431 VYYVQYVHARIASMLKKAAEEKGIGRVTAVDDKTLRRLAEPE-------EIDLVKLLARY 483

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  + +A    EP+++ FYL DLA+ FHG++S  +       V   +  LTM RL LV A
Sbjct: 484 PEAVSHAARFLEPHRITFYLLDLAAGFHGYYSRHK-------VLTEDDGLTMARLYLVCA 536

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  +I +GL ++GV +P  M
Sbjct: 537 VKQVIKNGLALLGVSAPESM 556


>gi|46579659|ref|YP_010467.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81566897|sp|Q72CN5|SYR_DESVH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46449074|gb|AAS95726.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233457|gb|ADP86311.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 551

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 195/557 (35%), Positives = 309/557 (55%), Gaps = 30/557 (5%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88
           ++  I+ P+    G L+ N A++L++  G +P  +A  I   ++  D D+ ++ IAG GF
Sbjct: 24  EKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATRIADALRNRDADITAIDIAGPGF 83

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+  S  + R+ +     +G  +G +  G G KV +E+VSANPTGP+H+GH R A VGD
Sbjct: 84  LNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVEYVSANPTGPLHIGHGRGAAVGD 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +LA +M F+GY+V+ EYYINDAG Q+  L LSV W   + L      LPE +Y G Y+K 
Sbjct: 144 SLARIMRFAGYDVSTEYYINDAGRQMRLLGLSV-WVRAKELAGRPVTLPEDFYRGDYIKD 202

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + +EL +K    LL+  +         Y++ +++  I+ DL    ++H ++ SE     G
Sbjct: 203 IARELMEKEPG-LLDLDDAAGEDRCFAYAMSSILDGIKQDLADFRVEHQVWFSERSLVEG 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +    + L   G  +E                    L FR+T  GDD DR L KSD
Sbjct: 262 --GAVEKTFNRLKEAGLAFE----------------QDGALWFRTTDFGDDKDRVLRKSD 303

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+ TYF++D+AY   KY+RGFD ++ + G+DH GY+ R+ A  AA+  K    +V+L +L
Sbjct: 304 GTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPRMRAAVAALGRKPEAFDVVLIQL 363

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R G  + MS RAG F TL  VV E G+D+ RFM L RK+   LDFD   VK+++ +
Sbjct: 364 VNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMFLSRKSDSPLDFDLELVKQRTMD 423

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA+AR  S+ R+A +   ++   L   ++ P   +    E++L+  L  +   
Sbjct: 424 NPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAPLSGD---DEMELLRLLDRFEET 480

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A  A  P+ ++ YL ++A   H +++      R   + A  + + + RL L+ AV  
Sbjct: 481 VAGAATALAPHHISHYLMEVAGALHSYYA------RQPILNATEQDVIVPRLALLRAVGC 534

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL+++GV +P  M
Sbjct: 535 VLANGLSLLGVSAPESM 551


>gi|120602858|ref|YP_967258.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166232782|sp|A1VEG5|SYR_DESVV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120563087|gb|ABM28831.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 551

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 195/557 (35%), Positives = 309/557 (55%), Gaps = 30/557 (5%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88
           ++  I+ P+    G L+ N A++L++  G +P  +A  I   ++  D D+ ++ IAG GF
Sbjct: 24  EKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATRIADALRNRDADITAIDIAGPGF 83

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+  S  + R+ +     +G  +G +  G G KV +E+VSANPTGP+H+GH R A VGD
Sbjct: 84  LNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVEYVSANPTGPLHIGHGRGAAVGD 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +LA +M F+GY+V+ EYYINDAG Q+  L LSV W   + L      LPE +Y G Y+K 
Sbjct: 144 SLARIMRFAGYDVSTEYYINDAGRQMRLLGLSV-WVRAKELAGRPVTLPEDFYRGDYIKD 202

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + +EL +K    LL+  +         Y++ +++  I+ DL    ++H ++ SE     G
Sbjct: 203 IARELMEKEPG-LLDLDDAAGEDRCFAYAMNSILDGIKQDLADFRVEHQVWFSERSLVEG 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +    + L   G  +E                    L FR+T  GDD DR L KSD
Sbjct: 262 --GAVEKTFNRLKEAGLAFE----------------QDGALWFRTTDFGDDKDRVLRKSD 303

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+ TYF++D+AY   KY+RGFD ++ + G+DH GY+ R+ A  AA+  K    +V+L +L
Sbjct: 304 GTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPRMRAAVAALGRKPEAFDVVLIQL 363

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R G  + MS RAG F TL  VV E G+D+ RFM L RK+   LDFD   VK+++ +
Sbjct: 364 VNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMFLSRKSDSPLDFDLELVKQRTMD 423

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA+AR  S+ R+A +   ++   L   ++ P   +    E++L+  L  +   
Sbjct: 424 NPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAPLSGD---DEMELLRLLDRFEET 480

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A  A  P+ ++ YL ++A   H +++      R   + A  + + + RL L+ AV  
Sbjct: 481 VAGAATALAPHHISHYLMEVAGALHSYYA------RQPILNATEQDVIVPRLALLRAVGC 534

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL+++GV +P  M
Sbjct: 535 VLANGLSLLGVSAPESM 551


>gi|293374939|ref|ZP_06621235.1| arginine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646416|gb|EFF64430.1| arginine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 553

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 195/556 (35%), Positives = 322/556 (57%), Gaps = 35/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           +++E  +D +HG  STN AM L++    +P  IAE I+     +  +V+ + IAG GFIN
Sbjct: 31  VILENSKDVSHGDYSTNIAMQLTKIAKKNPRMIAEEILNNFNAESANVEKIEIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  S   + + +I+  G E+G +  G G K N+E+VSANPTG +H+GH R A +GD+L
Sbjct: 91  FFMKKSAFTQSIKNIIELGHEFGTSKSGNGLKYNVEYVSANPTGDLHLGHARGAALGDSL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             ++  +GY+VTREYY+NDAG QI+ L +S + RY QAL   ++++PE  Y G  +  +G
Sbjct: 151 CRILTKAGYDVTREYYVNDAGNQIHNLVISAYARYLQAL-GLEAEMPEDGYHGPDIIALG 209

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + ++Y  +L+N  +E +  ++++ S++  +  IR DL    ++ D++ SE + +  D 
Sbjct: 210 QSMVEQYGDKLVNKLDENY-KLIREMSLEYELNKIRKDLDMFGVEFDMYTSEQELY--DN 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +++ I  L  +G++YE                +   + FRST  GDD DR L KSDGS
Sbjct: 267 NLVQESIKLLEEKGFIYE----------------EDGAVWFRSTDFGDDKDRVLKKSDGS 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+A    K +RG D ++ + G+DH GY+ R++A   A+  +  ++ V + ++VR
Sbjct: 311 YTYLTPDIANHIEKLKRGNDKLVDIWGADHHGYIARVKASMQALGYEADKLEVDIIQMVR 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG   KMSKR G  +T+R +VDEVG D+VR+  + R     +DFD     ++S ENP
Sbjct: 371 LIKDGEEFKMSKRTGKAVTIRELVDEVGVDAVRYFFVMRSGETQMDFDLDLATKKSNENP 430

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+Y QYA+AR  SI RQA++     + +L  + N I  E EF+  +L     + ++P V+
Sbjct: 431 VYYAQYAHARTCSILRQAEE--KGFNVELKDQYNHITHEKEFEVIKL-----MGDFPIVV 483

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A   + P+ +  Y+ DLA+ FH  ++        + +   N + T  +L L+ A+   
Sbjct: 484 GDAANKRRPHLICNYINDLATAFHSLYNAE------KVINEENVEKTNEKLALIKALEIT 537

Query: 570 INSGLNIIGVESPNEM 585
           I + L +IGV +P  M
Sbjct: 538 IKNALELIGVSAPERM 553


>gi|225017221|ref|ZP_03706413.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum
           DSM 5476]
 gi|224949996|gb|EEG31205.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum
           DSM 5476]
          Length = 562

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 204/564 (36%), Positives = 322/564 (57%), Gaps = 42/564 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKG 87
           L    IE P D +HG  + N AM+ +R   L P  IAE++   + ++    D   IAG G
Sbjct: 34  LPAFTIEIPADSSHGDFAANLAMVSARAFKLAPRKIAEILCGELNLNGTFFDRWEIAGPG 93

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN +L+ S+   ++ ++V  G +YGR+  G G KV +EFVSANPTGPMH+G+ R   +G
Sbjct: 94  FINFFLNQSWFGSVVEAVVQEGADYGRSEFGGGKKVMVEFVSANPTGPMHIGNARGGAMG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYL 206
           D LAS++ ++GY+VT+E+YINDAG QI   ALS+  RYQQ     D+  LPE  Y G  +
Sbjct: 154 DCLASVLDWAGYDVTKEFYINDAGNQIEKFALSLDVRYQQIYKGEDAVPLPEDAYQGADI 213

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K   +  AD Y  + L+  +++    + DY++   +  ++ DL    I++D++  E   H
Sbjct: 214 KVHAQNFADLYGDKFLDATQQERRKALVDYALPINIANLKTDLAKYRIEYDVWFKESVLH 273

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   ++ I+D L  +G  YE                    + ++S+  G + D  L++
Sbjct: 274 --EEGQVQKIVDILTERGLTYE----------------KEGAIWYKSSEYGSEKDDVLVR 315

Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           ++G  TYFAAD+AY   K+  RGFD +I + G+DH G+V RL+    AV    ++++V+L
Sbjct: 316 ANGIPTYFAADIAYHYNKFAVRGFDRVINIWGADHHGHVARLKGAMDAVGLDGSKLDVVL 375

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++VRL RDG P+K+SKR+G  ITL  ++DEV  D+ RF+   R+ +  LDFD     EQ
Sbjct: 376 MQMVRLMRDGEPVKVSKRSGKSITLVSLLDEVPIDAARFIFNLREANSHLDFDLDLAVEQ 435

Query: 446 SKENPVFYVQYAYARCRSIFRQ-AKDIFP---DLDFDLFPRNVIPQESEFDTSELQLIVH 501
           S +NPV+YVQYA+AR  SI ++ A++ F    D DF L      P+       E++LI H
Sbjct: 436 SSQNPVYYVQYAHARICSILKKLAQEGFSPQEDADFGLL---TAPE-------EIELIRH 485

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +A  P  I  A  A +P ++  Y  DLA++FH  ++  +       V+ ++ +LT  RL 
Sbjct: 486 IARLPGDIVEAAKAYDPARITRYSLDLATLFHKFYNACK-------VKGDDERLTTARLT 538

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AV +++ + L+++ +++P  M
Sbjct: 539 LCDAVRTVLENVLSMLKIDAPESM 562


>gi|325844324|ref|ZP_08168100.1| arginine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489191|gb|EGC91573.1| arginine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 553

 Score =  349 bits (895), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 195/556 (35%), Positives = 321/556 (57%), Gaps = 35/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           +++E  +D +HG  STN AM L++    +P  IAE I+     +  +V+ + IAG GFIN
Sbjct: 31  VILENSKDVSHGDYSTNIAMQLTKIAKKNPRMIAEEILNNFNAESANVEKIEIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  S   + + +I+  G E+G +  G G K N+E+VSANPTG +H+GH R A +GD+L
Sbjct: 91  FFMKKSAFTQSIKNIIELGHEFGTSKSGNGLKYNVEYVSANPTGDLHLGHARGAALGDSL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             ++  +GY+VTREYY+NDAG QI+ L +S + RY QAL   ++++PE  Y G  +  +G
Sbjct: 151 CRILTKAGYDVTREYYVNDAGNQIHNLVISAYARYLQAL-GLEAEMPEDGYHGPDIIALG 209

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + ++Y   L+N  +E +  ++++ S++  +  IR DL    ++ D++ SE + +  D 
Sbjct: 210 QSMVEQYGDRLVNKLDENY-KLIREMSLEYELNKIRKDLDMFGVEFDMYTSEQELY--DN 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +++ I  L  +G++YE                +   + FRST  GDD DR L KSDGS
Sbjct: 267 NLVQESIKLLEEKGFIYE----------------EDGAVWFRSTDFGDDKDRVLKKSDGS 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+A    K +RG D ++ + G+DH GY+ R++A   A+  +  ++ V + ++VR
Sbjct: 311 YTYLTPDIANHIEKLKRGNDKLVDIWGADHHGYIARVKASMQALGYEADKLEVDIIQMVR 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG   KMSKR G  +T+R +VDEVG D+VR+  + R     +DFD     ++S ENP
Sbjct: 371 LIKDGEEFKMSKRTGKAVTIRELVDEVGVDAVRYFFVMRSGETQMDFDLDLATKKSNENP 430

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+Y QYA+AR  SI RQA++     + +L  + N I  E EF+  +L     + ++P V+
Sbjct: 431 VYYAQYAHARTCSILRQAEE--KGFNVELKDQYNHITHEKEFEVIKL-----MGDFPIVV 483

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A   + P+ +  Y+ DLA+ FH  ++        + +   N + T  +L L+ A+   
Sbjct: 484 ADAANKRRPHLICNYINDLATAFHSLYNAE------KVINEENVEKTNEKLALIKALEIT 537

Query: 570 INSGLNIIGVESPNEM 585
           I + L +IGV +P  M
Sbjct: 538 IKNALELIGVSAPERM 553


>gi|315659043|ref|ZP_07911910.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496167|gb|EFU84495.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 555

 Score =  349 bits (895), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 209/580 (36%), Positives = 315/580 (54%), Gaps = 45/580 (7%)

Query: 15  LKEIDCKIKVEKKILDR----IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           + EI   IK  + I D+    I IE P+D  +G  STN AM+L++    +P  IA+ IV 
Sbjct: 12  INEIKTSIKSAELIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKRNPREIAQAIVD 71

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
            +      V  V IAG GFIN YL   YL  I+   +  G  YG     K  ++ +E+VS
Sbjct: 72  HLDTTKAHVKQVDIAGPGFINFYLDNYYLTAIIPEAISKGAHYGYASEPKNKRILLEYVS 131

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTG +H+GH R A VGD+LA+++  +GY+VTREYYINDAG QI  LA S+  R+ +AL
Sbjct: 132 ANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEAL 191

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            +    +PE  Y G  +  +GK+LA K+  E+ ++ +   L   +   V+  M  ++ DL
Sbjct: 192 GDTSHKMPEDGYNGKDIIEIGKDLAQKHP-EIKDYSDHDRLKTFRQLGVEYEMVKLKRDL 250

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              N   D + SE   +  D   I + +  +   GY YE      K   T          
Sbjct: 251 ADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE------KDGAT---------- 292

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             R++   DD DR L+KSDGSYTYF  D AY   K  RG D +I +MG+DH GY+ R++A
Sbjct: 293 WLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGADHHGYINRIKA 352

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                     ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R
Sbjct: 353 SLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMR 412

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVI 485
                 DFD    KEQS++NP++Y QYA+AR  SI +QA+    DI  D+DF L   +  
Sbjct: 413 SPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTDVDFSLITND-- 470

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                     + L+  +AE+ +VI+NA   + P++L  Y+ DLA+ FH  ++  +     
Sbjct: 471 --------KAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNAEK----- 517

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V  ++++ T   + L+ AV   +++ L ++GV +P  M
Sbjct: 518 --VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555


>gi|73663421|ref|YP_302202.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|109895041|sp|Q49VF3|SYR_STAS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72495936|dbj|BAE19257.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 555

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/557 (36%), Positives = 316/557 (56%), Gaps = 37/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           I IE P+D A+G  STN AM+L++    +P  IA+ IV  +     +V+ V IAG GFIN
Sbjct: 33  IKIEIPKDDANGDYSTNIAMVLTKIAKRNPREIAQAIVDHLDTTAANVEKVQIAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL  +YL +++S  +    ++G      G  + +E+VSANPTG +H+GH R A VGDTL
Sbjct: 93  FYLDNAYLTEVISEAIDKDEKFGSTAEQNGKNILLEYVSANPTGDLHIGHARNAAVGDTL 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYY+NDAG QI  LA S+  RY +AL ++  ++PEG Y G  + ++G
Sbjct: 153 ANILTAAGYHVTREYYVNDAGNQITNLARSIEARYFEALGDDSFEMPEGGYHGKDIINIG 212

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K   EL +  E++ +   +   V   M+ +R DL   N   D + SE   +  + 
Sbjct: 213 KDLAEK-QPELKDLSEDERIKTFRKLGVDYEMEKLRTDLSDFNTHFDNWFSETSLY--EK 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I ++++ ++  GY YE                D    L R+T   DD DR L+K+DG+
Sbjct: 270 GEITEVLNKMSELGYTYE---------------QDGATWL-RTTDFKDDKDRVLIKNDGN 313

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A       +  ++ + + ++VR
Sbjct: 314 YTYFLPDIAYHFDKIKRGNDTLINLFGADHHGYINRLKASLETFGVESDRLEIQIMQMVR 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    K++S++NP
Sbjct: 374 LMQDGQEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDTHFDFDMELAKQESQDNP 433

Query: 451 VFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           V+Y QYA+AR  SI +QA  + I P  D D     +I  +   D     L+  +AE+   
Sbjct: 434 VYYAQYAHARICSILKQAAERGITPSKDADY---TLITNDKAID-----LLKKVAEFETT 485

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I++A   + P+++  Y+ DLAS FH  ++  +       V  ++ + T   + L+ AV  
Sbjct: 486 IQSAAANRAPHRITNYIQDLASHFHKFYNAEK-------VLTDDVEKTKALIALIDAVRI 538

Query: 569 IINSGLNIIGVESPNEM 585
            + + L+++GV +P  M
Sbjct: 539 TLRNALSLVGVNAPETM 555


>gi|83942561|ref|ZP_00955022.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846654|gb|EAP84530.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 364

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 173/360 (48%), Positives = 242/360 (67%), Gaps = 6/360 (1%)

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E  WL  V++++   MMK+IRDDL +L ++ D+F SE   +      I   ID+L  +G 
Sbjct: 10  ESVWLEEVRNFATDEMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAIDDLKAKGL 67

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +YEG+L PPK K  +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K 
Sbjct: 68  IYEGVLEPPKGKKPEDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKV 126

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +RGFD +I V G+DH GYVKR++A  +A+SE    +++ L +LV+L+++G   KMSKRAG
Sbjct: 127 QRGFDRLIDVFGADHGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKEFKMSKRAG 186

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            F+TLR VVD+VG D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ 
Sbjct: 187 TFVTLRDVVDQVGPDVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVHSVL 246

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A +   D D +   R  + Q      +EL+L   LAE+PR++E A  + EP+++AFYL
Sbjct: 247 RKAAEAGVDTDIETLQRADLSQLDH--EAELKLAQKLAEWPRMVETAARSNEPHRIAFYL 304

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA  FHG W+ G + P LRF+Q ++  L+  ++ L  A A +I SGL I+GV+   EM
Sbjct: 305 YELAGDFHGLWNRGNDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGILGVKPAEEM 363


>gi|78043915|ref|YP_358996.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|109894979|sp|Q3AFT8|SYR_CARHZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77996030|gb|ABB14929.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 557

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 196/556 (35%), Positives = 315/556 (56%), Gaps = 38/556 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E+P++ AHG L+TN AM+L++    +P  IA  ++  ++I   V+ V IAG GFIN Y 
Sbjct: 36  LEKPKEKAHGDLATNLAMLLTKKARKNPREIAATLLEYLEIPAVVERVEIAGPGFINFYF 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              ++  ++  I+  G +YGR  IG G +V +EFVSANPTG +H+G+ R A +GD LA++
Sbjct: 96  KKDWVVAVIPEILSFGEKYGRLAIGAGKRVQVEFVSANPTGLLHMGNGRGAALGDILANI 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +GYEV+REYYINDAG QI     SV  RY + L     + PE  Y G  +    + +
Sbjct: 156 LTEAGYEVSREYYINDAGNQIENFNKSVEARYLE-LLGYKVEFPEEGYHGEDIIDTARNI 214

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++    ++ PE++    +   +++  ++ I+  L+   +++D++ SE   H  +   +
Sbjct: 215 VARFGDRFIHLPEKERQEALGKIALEEKLQSIKKSLENFGVKYDVWFSERSLH--ESGEV 272

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              +  L  +GY+YE                    L F ++ +G++ D  L++ +G  TY
Sbjct: 273 EKTVKLLLERGYLYE----------------KDGALWFAASKLGEEKDEVLVRKNGVPTY 316

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           +AAD+AY K K++RGFD +I + G+DH G+V R++    A+     ++ V+L +LVRL++
Sbjct: 317 YAADIAYHKNKFDRGFDLVINIWGADHHGHVSRMKTALKALGYDPERLIVILMQLVRLFQ 376

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
            G  ++MSKR G +ITL  +V+EVG D+ R+  + R +   LDFD    KE+S ENPV+Y
Sbjct: 377 GGELVRMSKRTGQYITLDELVEEVGVDAARYFFVMRSHDAHLDFDLDLAKEKSNENPVYY 436

Query: 454 VQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           +QYA+AR  S++RQ  +    + P  D DL    ++  E     +EL L+ HLAE+P  I
Sbjct: 437 IQYAHARIMSLYRQCNEQGVTLPPVEDVDL---AILSSE-----AELNLLRHLAEFPVEI 488

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E    A  P+ LA YL++LA  FH  ++  R       V      L+  RL LV A   +
Sbjct: 489 EKCATALAPHHLARYLHELAGYFHTFYNSCR-------VLGVEENLSKARLLLVEATRIV 541

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++GV +P +M
Sbjct: 542 LRKGLKMLGVSAPEKM 557


>gi|310639600|ref|YP_003944358.1| arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
 gi|309244550|gb|ADO54117.1| Arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
          Length = 559

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/567 (35%), Positives = 312/567 (55%), Gaps = 39/567 (6%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82
           V ++ L  I +E P+D +HG L+TN AM L+R    +P  IAE ++A + +    ++S  
Sbjct: 27  VSREELPTITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEDLIANMDLASASIESAE 86

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN  L+ SYL  ++  +   G +YGR  +G G KV IEFVSANPTG +H+GH R
Sbjct: 87  IAGPGFINFRLNKSYLYAVIGQVQEQGADYGRVQVGAGKKVQIEFVSANPTGSLHLGHAR 146

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A VGD L +++ F+GY+VTREYYINDAG QI  ++ S+  RY Q L    +++PE  Y 
Sbjct: 147 GAAVGDALCNVLDFAGYQVTREYYINDAGNQIYNMSRSIEARYLQEL-GQPAEMPEDGYH 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G  +    KEL  +    LL+          ++Y ++  +  I+ DL+   +  D + SE
Sbjct: 206 GEDIIGFAKELVAEKGDSLLSMEPGDRAAYFREYGLEKELNKIKRDLERFRVPFDSWFSE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  D   +   ++ L  +  +Y               D D    L  +T  GDD DR
Sbjct: 266 TSLY--DNGEVLKALNELRDREEIY---------------DKDGATWL-NTTKYGDDKDR 307

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+K+DG+YTY   D+AY + KY RG+D +I + G+DH GY+ R++A   A+     ++ 
Sbjct: 308 VLIKNDGTYTYLTPDIAYHRDKYARGYDTIINIWGADHHGYIPRMKAAMEALGNDPDKLK 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ ++V L+++G  +KMSKR G  +T+  +++EVG D++R+    R     LDFD    
Sbjct: 368 VLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLA 427

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498
              S ENPVFYVQYA+AR  S++RQA++    + P  + DL   + +  E E+D     L
Sbjct: 428 ISTSNENPVFYVQYAHARACSVYRQAEEQGIAVLPLAEVDL---SKLTAEHEYD-----L 479

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  + E P  +  A     P+++  Y+Y+LAS+FH ++   R       V   +   T  
Sbjct: 480 LRKIGELPEEVSVAAANFAPHRMIRYVYELASMFHSYYKAER-------VITEDAAQTQA 532

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  AV + I + L ++GV +P  M
Sbjct: 533 RLALFGAVRTTIANVLKLVGVSAPERM 559


>gi|284992535|ref|YP_003411089.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284065780|gb|ADB76718.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 553

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 200/557 (35%), Positives = 296/557 (53%), Gaps = 45/557 (8%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP++  HG  +TN A+ L++P G  P  +AEL+   ++  P + SV +AG GF+N+ L+ 
Sbjct: 35  RPKNPEHGDYATNVALRLAKPAGRPPREVAELLAGELRAHPGIASVDVAGPGFLNITLAQ 94

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
             L +I    V +G  YG      G ++N+EFVSANPTGP+H+G  R A VGD L  L+ 
Sbjct: 95  GALGRIAVDAVTAGPAYGHTGTLAGQRLNLEFVSANPTGPVHIGGTRWAAVGDALGRLLE 154

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            SG  VTREYY NDAGAQI+  A S+              +PE  Y G Y+  +  ++  
Sbjct: 155 ASGASVTREYYFNDAGAQIDRFARSLM------AAAVGRPVPEDGYAGDYIGEIAAQVV- 207

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                +L  P+E+     ++  V+ M   I+  L A  ++ D++ SE   H  +   +  
Sbjct: 208 AAEPGVLELPDEQQQERFRERGVELMFAEIKRTLAAFGVEFDVYFSERTLH--ETGALEK 265

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            I  L   G+VYE                       R+T  GDD DRPL+KSDG  TYFA
Sbjct: 266 AIARLRENGHVYEA----------------DGATWLRTTDFGDDKDRPLVKSDGDPTYFA 309

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRD 394
           AD AY+  K  RGFD ++ ++G+DH+GYV R  A+ AAV +   A + +LL +LV L RD
Sbjct: 310 ADCAYYLDKRSRGFDKVVIMLGADHAGYVGRYRALVAAVGDDPDANLEILLGQLVNLVRD 369

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G P++MSKRAG  + L  +V+ VG+D+ R+ +      + +D D      Q+ +NPVFYV
Sbjct: 370 GEPVRMSKRAGTVVLLEDLVEAVGADAARYALARASVDQQIDLDLDLWSRQTNDNPVFYV 429

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRV 508
           QYA+AR  S+ R A D+   L           +  + D ++L       L+  L E+PRV
Sbjct: 430 QYAHARISSVLRNAADLGIALG----------EPGDVDAAQLTHERENALLRALGEFPRV 479

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +A   + P+++A YL +LA  +H  +   R  PR          LT+ RL L  A A 
Sbjct: 480 LTSAAELRAPHRVARYLEELAGTYHRFYDSCRVLPR---GDEETTPLTVARLWLCAATAV 536

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL ++GV +P  M
Sbjct: 537 VLRNGLGVLGVSAPERM 553


>gi|27379868|ref|NP_771397.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353021|dbj|BAC50022.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 416

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 174/358 (48%), Positives = 239/358 (66%), Gaps = 4/358 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           ++LFAD  +R+    + +       + I   R+V+E PRD +HG ++TNAAM+L++    
Sbjct: 8   LHLFADVLARVHAACRALAADASWPEGIDFSRVVVEPPRDASHGDMATNAAMVLAKEAKA 67

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I  R++ D  +  V +AG GFINL L P+   + L +++  G +YGR  +  
Sbjct: 68  KPRDLAEQIAERLRADALIAKVDVAGPGFINLTLKPAAWAEALRTVLREGADYGR--VRG 125

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G+KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F G++VTREYYINDAGAQ++ LA 
Sbjct: 126 GSKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLQFGGHDVTREYYINDAGAQVDVLAR 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +   +PEG YPG YLK VG+ LA ++  +L    E +WLP V+  ++ 
Sbjct: 186 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGQALAKEHGDKLRAMTEAEWLPTVRAKAIA 245

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  I+DDL ALNI+HD+F SE        + + + ID L  +G +YEG LPPPK    
Sbjct: 246 MMMDEIKDDLAALNIRHDVFFSERSLIESGNNKVAETIDFLKAKGDIYEGRLPPPKGAPV 305

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           +  + DR+QLLF++T  GDDVDRPL+KSD SYTYFA+D+AY K K++RGF  MI V G
Sbjct: 306 EDWE-DREQLLFKATAYGDDVDRPLIKSDNSYTYFASDIAYHKNKFDRGFAEMIDVWG 362


>gi|46204894|ref|ZP_00209613.1| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 311

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/313 (55%), Positives = 229/313 (73%), Gaps = 2/313 (0%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA S F RY++AL    + 
Sbjct: 1   MHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLARSAFLRYREALGETIA- 59

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +PEG YPG YLK VG  LA  +   LL+ PE +WLP+V+ +++ AMM  IR+DL A+ I+
Sbjct: 60  IPEGLYPGDYLKPVGAALAQAHGRALLDKPEAEWLPLVRRFAIDAMMDTIREDLAAIGIR 119

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           HD+F SE      +   + ++++ L  +G VYEG LPPPK +     + DR+Q LFRST 
Sbjct: 120 HDVFFSEATLQGENGGKVAELLEALRAKGLVYEGHLPPPKGQLPDDWE-DREQTLFRSTQ 178

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GDDVDR LLKSDGSYTYFA+D+AY + K+ RG + +I V+G+DH GYVKR++A   AVS
Sbjct: 179 FGDDVDRALLKSDGSYTYFASDIAYHRDKWLRGANELIDVLGADHGGYVKRMQAAVKAVS 238

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           + +A+++V LC+LVRL R G P+KMSKRAG+FITLR V+DEVG D++RFMML+RKN   L
Sbjct: 239 DGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFITLREVIDEVGRDAIRFMMLYRKNDATL 298

Query: 436 DFDFCKVKEQSKE 448
           DFD  KV EQSK+
Sbjct: 299 DFDLAKVVEQSKD 311


>gi|121999194|ref|YP_001003981.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166232793|sp|A1WZR7|SYR_HALHL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|121590599|gb|ABM63179.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 584

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 213/590 (36%), Positives = 321/590 (54%), Gaps = 66/590 (11%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +ER RD AHG  + N AM+L++P    P  +AE I +R+     +  V IAG GF
Sbjct: 28  LPEVQVERARDRAHGDYAANTAMVLAKPARQKPRDLAETIRSRLPASEAIAGVEIAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N  L+ +  ++ +   +  G EYGR+ +G G +V+IEFVSANPTGP+HVGH R A  GD
Sbjct: 88  LNFTLTTAARQESVRVALRQGAEYGRSDVGAGHRVHIEFVSANPTGPLHVGHGRGAAFGD 147

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LAS++  +GY V REYY+NDAG Q++ LA S++ RY +A        P   Y G Y+  
Sbjct: 148 ALASVLEAAGYHVHREYYVNDAGRQMDILAASLWLRYLEAA-GEPVSFPNKGYQGDYIVT 206

Query: 209 VGKEL--AD-----KYSSEL-LNFPEEKWLP---------------------IVKDYSVQ 239
             +EL  AD     + ++EL    P E   P                      V D++++
Sbjct: 207 HARELFEADGREHVRTAAELGAGLPAEDDDPEGYLDALVARSRELLGETAYRRVLDFALE 266

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A++  IR DL A  + +  + SE      D   I   ++ L + GY Y            
Sbjct: 267 AILGDIRADLDAFGVHYHRYFSERQLV--DQGRIEHALERLDQAGYTY------------ 312

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            + D     L F++++ GDD DR L + +G  TYFAAD+AY   K ERGFD ++ V G+D
Sbjct: 313 -RAD---GALWFQASVFGDDKDRVLRRDNGLTTYFAADVAYHLDKIERGFDTLVNVWGAD 368

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++A   A+     +++V L +   LYR G  + MS R+G+F+TLR + DEVG 
Sbjct: 369 HHGYVPRVQAALKALGVDAERLDVRLVQFAILYRGGEKLPMSTRSGEFVTLRELRDEVGK 428

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF  + R++ + +DFD    K +S +NPV+Y QYA+AR  S+FRQ       L+   
Sbjct: 429 DAARFFYVMRRSEQHMDFDLDLAKSESADNPVYYCQYAHARICSVFRQ-------LEERG 481

Query: 480 FPRNVIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               V P E+  +      E  L+  L  YP VIE+A +A+EP+++A YL +LA+ FH +
Sbjct: 482 LACRVTPDEAALERLDAEHEAILLDLLGRYPEVIESAALAREPHQVAQYLRELAAAFHTY 541

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++       + F+  ++  L   RL LV A   ++ +GL ++GV++P  M
Sbjct: 542 YN------AVPFI-IDDEALRDARLTLVQATRQVLANGLGLLGVDAPQSM 584


>gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 547

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 197/562 (35%), Positives = 315/562 (56%), Gaps = 42/562 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + +R  +E+P+    G  +TN A +L++ +  +P  +A+ + A++    + + V +AG G
Sbjct: 24  VAERATVEKPKKSEFGDFATNVAFLLAKVVRQNPRVVAQELAAKLSGVEEFEKVEVAGGG 83

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN +LS      +L  +V +  ++  + +G G KV +E+VSANPTGP+HVGH R AVVG
Sbjct: 84  FINFFLSQKAYENLLVQVVET--DFYVSDVGGGEKVLLEYVSANPTGPLHVGHGRGAVVG 141

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L  +M  +GY   RE+YINDAG QI  L LS++ R +Q L   + +LPE  Y G Y+ 
Sbjct: 142 DVLYRIMRLTGYVPEREFYINDAGRQIRLLGLSIYLRAKQ-LKGENVELPEDAYRGDYIV 200

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + K+L ++   +LL+ PEE+ + +   +  + ++K I  DLK L ++ D + SE   H 
Sbjct: 201 ELAKKLLEEVRPDLLDLPEEEAVEVAAQFGKEELLKEIEADLKKLRVEFDNWFSEKSLH- 259

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   I +++  L  +G +YE                    L  ++T+ GDD DR + +S
Sbjct: 260 -DSGKIEEVLKLLEEKGLLYE----------------KDGALWLKTTLFGDDKDRVVKRS 302

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            G YTYFAAD+AY   K +RG+D  + V G+DH GY+ R+EA   A+   +  + V+L +
Sbjct: 303 TGEYTYFAADIAYHYDKLKRGYDRAVDVWGADHHGYIPRVEAALKALGAPEGWLEVVLIQ 362

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V+L++ G  +KMSKR GDF+ LR ++++VG D VRF  L +++   LDFD       S 
Sbjct: 363 MVKLFKGGKEVKMSKRKGDFVPLRWLMEQVGVDPVRFFFLLKRHDTPLDFDLDLAVSTSS 422

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLA 503
           +NPV+YVQYA+AR  S+  +AK+           R  +P +   D      E +LI    
Sbjct: 423 DNPVYYVQYAHARLCSVLDKAKE-----------RGFLPSKENLDLLSSDEERKLITGCY 471

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +    ++ A   +EP++L +YL +LAS  H  ++      + + +  +N +LT  RL LV
Sbjct: 472 QLKYELQQAAQKREPHRLTYYLIELASTLHRFYN------KHKVINEDNPQLTRARLYLV 525

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV   + +GL I+ V +P  M
Sbjct: 526 EAVRKTVATGLAILNVSAPRRM 547


>gi|291279741|ref|YP_003496576.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754443|dbj|BAI80820.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 543

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 207/557 (37%), Positives = 312/557 (56%), Gaps = 42/557 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P+D  +G  +TN AM L++    +P  IA  +V  I+ D  +D + IAG GFIN +
Sbjct: 25  IIEIPKDSKNGDFATNVAMKLAKVFKKNPRDIASDLVTNIEKDNFIDKIEIAGPGFINFF 84

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++  Y   I+   V+    Y     G+  +V +EFVSANPTGP+H+GH R A  GDTLA 
Sbjct: 85  INKKYFESIIEQ-VLKDENYFVLDFGENKRVLVEFVSANPTGPLHIGHGRGAAYGDTLAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +G++V +EYYINDAG Q+  L  S+  RY+Q +     ++ +GY  G Y+  + K+
Sbjct: 144 LLRVAGFQVEKEYYINDAGNQMKMLGDSIVTRYKQLVNGKIEEMQDGY-RGEYIIDIAKK 202

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPS 271
           + ++Y   LL+ PE K   I     +  +MK I DDL    +  D + SE   F +G   
Sbjct: 203 IYEEYGDSLLDDPE-KCFNICFKTGLDEIMKSIVDDLDDFRVSFDRWFSEKSLFEKGVVD 261

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
               I+D     GY+YE                    + F+ST  GD+ DR + K+DGSY
Sbjct: 262 KALSILD---ENGYLYE----------------KDGAVWFKSTSFGDEKDRVVKKADGSY 302

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA+D+AY   K ERG+D  + V G+DH GY+ R+     A+      + ++L ++V L
Sbjct: 303 TYFASDIAYHLNKIERGYDLFVNVWGADHHGYMNRMFGALKALGAPDDILKIVLIQMVNL 362

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            + G  I MS RAG+FITLR ++DEVG+D+ RF  L R ++   DFD    K +S +NPV
Sbjct: 363 VKGGERISMSTRAGEFITLRWLIDEVGADAARFFYLMRDHNAQFDFDIDLAKSKSSDNPV 422

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDL---FPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +YVQYA+AR  S+F  A  I   ++F L     +  + QE E       +I  + E  +V
Sbjct: 423 YYVQYAHARVNSLFENA--IEKGVEFRLAENLDKLTLDQEKE-------IIKKIDELKKV 473

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+ A    EP+++++YL +LAS+FH ++ + +       + +++ +LT  RL L  AVA 
Sbjct: 474 IKAAATHLEPHRISYYLQELASLFHNYYYNFK-------IISDDYELTNARLNLAKAVAK 526

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL I+GVE+P +M
Sbjct: 527 TIKFGLEILGVEAPEKM 543


>gi|258405440|ref|YP_003198182.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797667|gb|ACV68604.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 551

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 200/561 (35%), Positives = 316/561 (56%), Gaps = 46/561 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIA----ELIVARIKIDPDVDSVFIAGKGFI 89
           ++ P+D   G +++N AM+L++  G  P  +A    E ++ R     D++   IAG GF+
Sbjct: 28  LDTPKDPNFGDVASNLAMVLAKQAGQKPRDLAASLREEVLQRGAAIQDIE---IAGPGFL 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N++  P++ ++ +S I  +G  YG++ +G+G  V +E+VSANPTGP+H+GH R A VGD+
Sbjct: 85  NVFFKPAFWQQTVSVIQEAGQSYGQSDMGQGKTVQVEYVSANPTGPLHIGHGRGAAVGDS 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G+ VT EYY+NDAG Q+  L  S+ +R  + L   D+  PE +Y G Y++ +
Sbjct: 145 LARILRRTGHTVTTEYYLNDAGRQMQILGASIAYRVLELLGGPDT-FPEDHYQGGYIRDL 203

Query: 210 GKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +EL D   + L  +++PE   L   + + +  +++ I+ DL+   ++H ++ SE     
Sbjct: 204 AQELVDTRGASLSAMDWPE--LLEHCRQHGLTRILEGIKRDLRDFRVEHQVWFSEQSLL- 260

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   +   + +LA +G  YE                    L F ST  GDD DR L KS
Sbjct: 261 -DKGRVEATLTDLANRGLAYE----------------QDGALWFASTTFGDDKDRVLRKS 303

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DG  TYFA+D+AY   KY RGFD ++ + G+DH GYV R++    A+      + V+L +
Sbjct: 304 DGDLTYFASDIAYHADKYARGFDTVVDIWGADHHGYVPRMKGAVQALGRASEDLQVILVQ 363

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV L RDG  + MS RAG F TL  V  EVG D+ RF+ L RK+   LDFD   VK QS 
Sbjct: 364 LVNLLRDGEQVSMSTRAGKFETLADVCAEVGPDAARFIFLSRKSDSHLDFDLELVKRQSM 423

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSE-LQLIVHLAEY 505
           +NPV+YVQYA+AR  S+ R+      +  F+  PR V   + +  DT+E + L   L  +
Sbjct: 424 DNPVYYVQYAHARINSVLRKG----AERGFE--PRPVSEADLALLDTAEDMDLFKKLDRF 477

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANNRKLTMMRLQLVH 564
           P V++ A     P+ ++FYL +LA + H ++ +H         + A +  L   R  L+ 
Sbjct: 478 PEVVQGAARTLSPHHVSFYLQELAGLLHRYYNTHS-------VLYAESDALLQARFHLLL 530

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++++GL ++GV +P +M
Sbjct: 531 AVRQVLHNGLELLGVHAPEQM 551


>gi|319891595|ref|YP_004148470.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161291|gb|ADV04834.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 552

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 200/559 (35%), Positives = 308/559 (55%), Gaps = 42/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+LIV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEIPKDTKNGDYATNIAMVLTKLAKRNPREIAQLIVDHLDTEAAHVKKIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL  SYL  ++   +    ++GR    K  K+ +E+VSANPTG +H+GH R A VGDTL
Sbjct: 91  FYLDSSYLNAVIDQALELDTQFGRVAESKNKKILVEYVSANPTGDLHIGHARNAAVGDTL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY+VTREYYINDAG QI  LA S+  RY Q L    +++P   Y G  +K++G
Sbjct: 151 CNILDAAGYDVTREYYINDAGNQITNLAKSIEARYLQHL-GQKAEMPADGYHGQDIKNIG 209

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +LA K  + L++  +++ L   +   V   M  ++ DL   NI  D + SE   +  + 
Sbjct: 210 ADLAKKQPN-LMDLSDDERLKTFRQLGVDYEMAKLKQDLADFNIHFDNWFSETSLY--EK 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I+ +++ +   GY YE                D    L R+T   DD DR L+K DG+
Sbjct: 267 GEIKAVLERMKENGYTYE---------------QDGATWL-RTTDFKDDKDRVLIKKDGT 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K++RG DN+I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 311 YTYFLPDIAYHYDKFQRGNDNLINLFGADHHGYINRLKASLETFGVDSDRLEIQIMQMVR 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 371 LMQDGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSADTHFDFDMALAKEQSQDNP 430

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI RQA+     +    D+     +            ++L+  +AE+ 
Sbjct: 431 VYYAQYAHARICSILRQAEAQGYQVEKGADYQTITND----------KAIELLKKVAEFE 480

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +IE A  A+ P+++  Y+ DLA+ FH  ++  +       V   ++  T   L L+ AV
Sbjct: 481 PMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAEK-------VLTEDQAKTKAHLALIDAV 533

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P +M
Sbjct: 534 RITLRNALQLVGVTAPEQM 552


>gi|258592259|emb|CBE68568.1| arginyl-tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 557

 Score =  345 bits (886), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 209/563 (37%), Positives = 306/563 (54%), Gaps = 48/563 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           +  E P D   G LST  A  L++ L   P  IA  I A      D VD V +AG G++N
Sbjct: 34  MTWEYPSDPVFGDLSTTLAFGLAKALRQRPRDIAMQIAASAAFPSDLVDRVEVAGAGYLN 93

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++  + R +   I+ +G  YGR  +G G  V +EFVSANPTGP+ V + R A +GD +
Sbjct: 94  FFIARPFWRHLAQEILRAGPTYGRADVGGGRPVLVEFVSANPTGPLVVVNARAAAIGDAI 153

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A L+   G+   REYY+NDAG Q  TLAL++  R +Q L   D  +PE  YPG YL  + 
Sbjct: 154 ARLLEAIGHRPYREYYVNDAGNQFRTLALAMEVRCRQ-LQGEDCPMPEEAYPGEYLIDLA 212

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGD 269
           +E  D++  E+L+ PE +    +  ++V+ +++  R  L+A  +  D + SE +   RGD
Sbjct: 213 REFLDQHGPEVLSAPEPERRDRLGRFAVERIIEWQRASLEAYGVTFDGWFSERNLRERGD 272

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +    +I+ L  + ++YE                    + FRST+ GDD DR L+K DG
Sbjct: 273 TT---QVIEALKARSFLYE----------------QDGAVWFRSTLFGDDKDRVLVKGDG 313

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYF  D+AY + K+ RGF  +I + G DH GYV R++A   A+      + +L+ +LV
Sbjct: 314 EITYFLPDIAYHQDKFARGFAQVIDLWGPDHHGYVPRMQAAMQALGHPPGALKILIVQLV 373

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RL R    ++MSKRAG F+T+  +VDEVG D+ R+  L R+    LDFD   VK  S+EN
Sbjct: 374 RLMRGTEQVRMSKRAGQFVTMGELVDEVGRDAARYTFLTRRCDSQLDFDLELVKSASEEN 433

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-------SELQLIVHL 502
           PV+YVQYA+ R   I R+A             R  +P  S  D         E+ LI  L
Sbjct: 434 PVYYVQYAHTRLCGILREAT------------RAQLPVPSPEDNLDRLDLPEEIGLIKQL 481

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A YP ++  A  A EP++L  YL+DLA+ FHG+++      R R + A+   LT  RL L
Sbjct: 482 ALYPELVIGAAQALEPHRLTTYLHDLAAQFHGYYA------RHRIISADT-NLTRARLTL 534

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V A+  ++ + L ++GV +P  M
Sbjct: 535 VAALRVVMANTLGLLGVSAPERM 557


>gi|225850150|ref|YP_002730384.1| arginyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646328|gb|ACO04514.1| arginyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 552

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 201/563 (35%), Positives = 327/563 (58%), Gaps = 36/563 (6%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           ++ ++I +E P++   G +S NAA +LS+ L   PL IA+ I   ++   +   V +AG 
Sbjct: 22  EVEEKIKVEIPKEDRFGDISINAAFLLSKILRDKPLNIAQRIKNILENVEEFSKVEVAGA 81

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN++LS  +   IL  I+     YGR+   +G  +N+EFVSANPTGP+H+GH R AVV
Sbjct: 82  GFINIFLSRKFYADILKRIIQEKENYGRSEKKEGY-INVEFVSANPTGPLHLGHGRGAVV 140

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G+ +++L  ++GY V RE+YINDAG QI  L  SV+ R++Q +   D   PE  Y G Y+
Sbjct: 141 GNVVSNLYEYAGYTVEREFYINDAGRQIYKLGESVYARFRQ-IDQPDYPFPEDGYHGEYI 199

Query: 207 KHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           K + + L      ++L+  +EK  +    +++   +++ I++DLK   +  DI+ SE   
Sbjct: 200 KEIAQHLYKYEKEKILSMVDEKQAIDFCSEFAKDMLLERIKEDLKEFGVTFDIWFSERSL 259

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + + I+ L ++G +YE                    +  ++T+ GDD DR ++
Sbjct: 260 Y--SSGKVDEAIEFLRKKGLIYE----------------KEGAVWVKTTLFGDDKDRVII 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           KSDGSYTYFA D+AY   K++RG+D +I V G+DH GY  RL++   A   ++  I V+ 
Sbjct: 302 KSDGSYTYFAGDIAYHYDKFKRGYDFIINVWGADHHGYFPRLKSAVMAFGVREDWIRVIF 361

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +LV+L+++G  IKMSKR+G F+TL+ ++DEVG D+V +  L +     L+FD     ++
Sbjct: 362 IQLVKLFKEGKEIKMSKRSGSFVTLKELIDEVGKDAVIYFFLTKDPDTHLNFDIDLALKK 421

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           S ENPV+YVQYA+AR  S+FR+AK+ F   P+ DFD    +++ ++      E  ++ HL
Sbjct: 422 SSENPVYYVQYAHARICSVFREAKERFGFDPENDFDA-DIDLLKED-----QERVIMKHL 475

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +  P +I  A + ++P+KL    YDLAS FH ++++       +F+   + KL   RL L
Sbjct: 476 SFIPDLIMEAALKEQPHKLTQITYDLASDFHYYYNN------FKFLVEEDEKLMRARLYL 529

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + AV   + +   ++G+     M
Sbjct: 530 LKAVREALRTLFKLMGITPVERM 552


>gi|160914601|ref|ZP_02076815.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991]
 gi|158433141|gb|EDP11430.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991]
          Length = 547

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/559 (35%), Positives = 304/559 (54%), Gaps = 37/559 (6%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGK 86
           + + IVIE PRD +HG  STN AM L+R L  +P  IA+ I+  +  D  +++S  IAG 
Sbjct: 25  VAEDIVIEIPRDLSHGDYSTNMAMQLTRILKNNPRVIAQGIIEHLDHDAANIESCEIAGP 84

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  +  + + +I++ ++ +G  YG N  GKG KVN+E+VSANPTG +H+GH R A  
Sbjct: 85  GFINFVIRKTSMAEIIARVLEAGDHYGENETGKGQKVNVEYVSANPTGDLHLGHARGAAW 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD++  LM  SGY+V REYY+NDAG QI  L LS+  RY++ L   D  LPE  Y G  +
Sbjct: 145 GDSITRLMKASGYDVCREYYVNDAGNQIINLGLSLQARYREYL-GMDFTLPEDGYHGEDV 203

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K +   LA +Y  E      +  L   K+  ++  +  I+ DL    +  D++ SE    
Sbjct: 204 KKIAIALAKEYG-EAYAEENDANLKFFKEKGIEFELNKIKRDLDYFRVHFDVWSSEQAIR 262

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             D   +   +  L  +G  YE                +   L F +T  GDD DR L K
Sbjct: 263 --DAGKVETALAQLHEKGLTYE----------------EDGALWFATTKFGDDKDRVLRK 304

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            DGSYTY   D+AY K K +RGFD ++ ++G+DH GY+ RL+A   A+     ++ V + 
Sbjct: 305 KDGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIEALGNDPDKLQVDII 364

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++VRL  +G  +KMSKR G+ +T+R + DEVG D+VR+  + R      DFD    ++QS
Sbjct: 365 QMVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHFDFDLGLARKQS 424

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +NPV+Y QYA+AR  SI RQA  + P   ++L               E+ L+ ++ E+ 
Sbjct: 425 NDNPVYYAQYAHARICSILRQAPQLAPAQSYELLTHE----------KEIALMKYINEFS 474

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+ +A   + P+++  Y+  LA  FH  ++        + +  NN  L+  R+ L+ A 
Sbjct: 475 GVVSDAAKYRAPHRVCNYVQKLAQHFHSFYN------ACKVIDMNNEALSAQRIALLKAT 528

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L  IGVE+  +M
Sbjct: 529 KITLKNALAFIGVEATEKM 547


>gi|254479329|ref|ZP_05092667.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214034722|gb|EEB75458.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 555

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/560 (35%), Positives = 316/560 (56%), Gaps = 40/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           + +E P++  HG L+TN AM+++R   + P  IAE+I +++      ++ V +AG GFIN
Sbjct: 30  VEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIAEIITSKMNTSGTFIEKVEVAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+ ++L + L  I   G +YGR  +GKG KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 90  FFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQVEFVSANPTGPMHMGNARGGAIGDVL 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           AS++ ++GY V+RE+YINDAG QI     S+  RY Q L   D+++PEG Y G  +    
Sbjct: 150 ASILDYAGYNVSREFYINDAGNQIEKFGYSLEARYLQ-LLGIDAEVPEGGYHGEDIIDRA 208

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  + Y  +  + P E+    + +Y ++  ++ +++DL    I++D++ SE   +  D 
Sbjct: 209 KEFLEIYGDKYKDVPSEERRKALIEYGLKKNIEKMKEDLALYGIEYDVWFSEQSLY--DS 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  +I+ L  +GY YE                    L F+ T+ G + D  L++S+G 
Sbjct: 267 GEVYKVIEELTEKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGI 310

Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            TY A+D+AY K K+  RGFD +I V G+DH G++  ++    A+     +++V+L +LV
Sbjct: 311 PTYLASDIAYHKNKFVTRGFDWVINVWGADHHGHIAPMKGAMKALGIDPNRLDVVLMQLV 370

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L   G  ++MSKR G  ITLR +++EVG D+ RF    R     ++FD    K+Q+ EN
Sbjct: 371 KLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAARFFFNMRSPDSPIEFDLDLAKQQTNEN 430

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           PVFYVQYA+AR  SI RQ +++   +    D DL    ++ +E E D     LI  LA +
Sbjct: 431 PVFYVQYAHARICSIIRQLEEMGVKIENIEDVDL---GLLKEEEEVD-----LIKKLAYF 482

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  I  A     P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ A
Sbjct: 483 PEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR-------VKGAEENLMKARFALILA 535

Query: 566 VASIINSGLNIIGVESPNEM 585
           V +++ + L+I+ V +P  M
Sbjct: 536 VKTVLKNALDILKVTAPERM 555


>gi|242372836|ref|ZP_04818410.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349455|gb|EES41056.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 553

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 205/578 (35%), Positives = 313/578 (54%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  IK  +   D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEASIKKARLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL +++   +  G ++G     K   + +E+VSAN
Sbjct: 72  DTSKAHVKEVDIAGPGFINFYLDNHYLTEVIPEAIHKGDKFGYADEPKNKNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIETRYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++PE  Y G  +  +GK+LADK+  E+ ++ +E+ L   +   V   M  ++ DL A
Sbjct: 192 TSHEMPEDGYNGKDIIEIGKDLADKHP-EIKDYSDEERLKTFRQLGVDYEMDKLKKDLAA 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I + +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIDNTLAKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    +I  D DF       I  
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGVEITTDADF-----TTITN 467

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           E       ++L+  +AE+   IE+A   + P++L  Y+ DLAS FH  ++  +       
Sbjct: 468 E-----KAIELLKKVAEFETTIESAAEHRAPHRLTNYIQDLASAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDAEKTKAHVAMIEAVRITLHNALTLVGVTAPESM 553


>gi|323465238|gb|ADX77391.1| arginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 552

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 200/559 (35%), Positives = 306/559 (54%), Gaps = 42/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++     P  IA+LIV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEIPKDTKNGDYATNIAMVLTKLAKRTPREIAQLIVDHLDTEAAHVKKIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL  SYL  ++   +    ++GR    K  K+ +E+VSANPTG +H+GH R A VGDTL
Sbjct: 91  FYLDSSYLNAVIDQALELDTQFGRVAESKNKKILVEYVSANPTGDLHIGHARNAAVGDTL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY+VTREYYINDAG QI  LA S+  RY Q L    +++P   Y G  +K++G
Sbjct: 151 CNILDAAGYDVTREYYINDAGNQITNLAKSIEARYLQHL-GQKAEMPADGYHGQDIKNIG 209

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +LA K    L++  +++ L   +   V   M  ++ DL   NI  D + SE   +  + 
Sbjct: 210 ADLAKK-QPNLMDLSDDERLKTFRQLGVDYEMAKLKQDLADFNIHFDNWFSETSLY--EK 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I+ +++ +   GY YE                D    L R+T   DD DR L+K DG+
Sbjct: 267 GEIKAVLERMKENGYTYE---------------QDGATWL-RTTDFKDDKDRVLIKKDGT 310

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K++RG DN+I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 311 YTYFLPDIAYHYDKFQRGNDNLINLFGADHHGYINRLKASLETFGVDSDRLEIQIMQMVR 370

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 371 LMQDGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSADTHFDFDMALAKEQSQDNP 430

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI RQA+     +    D+     +            ++L+  +AE+ 
Sbjct: 431 VYYAQYAHARICSILRQAEAQGYQVEKGADYQTITND----------KAIELLKKVAEFE 480

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +IE A  A+ P+++  Y+ DLA+ FH  ++  +       V   ++  T   L L+ AV
Sbjct: 481 PMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAEK-------VLTEDQAKTKAHLALIDAV 533

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P +M
Sbjct: 534 RITLRNALQLVGVTAPEQM 552


>gi|304437110|ref|ZP_07397073.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370061|gb|EFM23723.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 552

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 204/561 (36%), Positives = 293/561 (52%), Gaps = 34/561 (6%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E   L  I++E P D A G  +TN AM  +R     P  IAE + A +     +D   +A
Sbjct: 26  EGGALPPILLEEPPDKALGDFATNFAMQSARVFRQPPKKIAETLRAHL-TGAWLDHAEMA 84

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+N YL    +   L  I+ +G  YG         + +E+VSANPTGP+HVGH R A
Sbjct: 85  GPGFLNFYLKKDVMADTLRGILRAGETYGTLAPKDAAPIQVEYVSANPTGPLHVGHGRGA 144

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VG  L +L+  +GY V  EYY+NDAG Q++ LA+SV  RY + L   +   PE  Y G 
Sbjct: 145 AVGSALVTLLRTAGYTVESEYYVNDAGNQMHLLAVSVNARYLE-LLGREVLFPENGYHGA 203

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +    + + D+     L   EE+ L   KD + +  +  +R+DL    +  D + SE  
Sbjct: 204 DIVETAQRIIDRDGERYLALSEEERLEQFKDIAYREKLAALREDLADFGVTFDAWFSERT 263

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            H   P+ +R ++D L  +G  YE                    +  RST  GDD DR +
Sbjct: 264 LH---PAAVRRVVDVLLERGTAYE----------------KDGAVWLRSTDYGDDKDRVI 304

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            + +G  TY AAD+AY   KY RGF  ++ + G+DH GYV R++A  AA+     Q+ VL
Sbjct: 305 FRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGADHHGYVARVKAAMAALGHDPQQLTVL 364

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V LYRDG  +K+SKR G+ +TLR +++EVG D+ R+  L R     LDFD    K+
Sbjct: 365 LLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGVDAARYFFLMRSLDSQLDFDLDLAKK 424

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           ++ ENPV+Y+QYA+AR  SIFRQA+      +  + P +    E   D +E  LI  LA 
Sbjct: 425 RTNENPVYYIQYAHARISSIFRQAE------ESKIVPLDGAELERLTDETETALIKKLAA 478

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP  IE A     P ++A Y ++LA+ FH  ++  R       +      L   RL LV 
Sbjct: 479 YPEEIERAAAEYAPQRIARYSHELAAAFHAFYNKCR-------IVGQEPALASARLALVM 531

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   +I   L I+GV +P +M
Sbjct: 532 ATGRVIRHSLGILGVSAPEKM 552


>gi|289579360|ref|YP_003477987.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289529073|gb|ADD03425.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 561

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/546 (36%), Positives = 313/546 (57%), Gaps = 33/546 (6%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRK 100
           HG L+ N AMI+++   + P  IAE+IV+++      ++ + +AG GFIN +L+  +L +
Sbjct: 47  HGDLAINTAMIMAKQAKMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEE 106

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            L  +   G +YGR  IGKG KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+
Sbjct: 107 TLKLVYKRGKDYGRVNIGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYD 166

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y  +
Sbjct: 167 VTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYGDK 225

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             + P E+    + +Y ++  ++ I++DL+   I++D++ SE   +  D   +  +I+ L
Sbjct: 226 YKDAPSEERRKTLVEYGLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEEL 283

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            ++GY YE                    L F+ T+ G + D  L++++G  TY A+D+AY
Sbjct: 284 KQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAY 327

Query: 341 FKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            K K+  RGFD +I V G+DH G++  ++    A+     +++V+L +LV+L   G  +K
Sbjct: 328 HKNKFITRGFDWVINVWGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVK 387

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+A
Sbjct: 388 MSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHA 447

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SI RQ ++     + D    +++ +E E D     LI  LA +P  I  A     P+
Sbjct: 448 RICSIIRQLEEKVKIENIDEVDLSLLKEEEEKD-----LIKKLAYFPEEITIAARTLTPH 502

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++  Y+ D+AS+FH  ++    + R++ V+ N   L   R  L+ AV ++I + L+I+ V
Sbjct: 503 RITRYILDVASLFHSFYN----SHRVKGVEEN---LMKARFVLILAVKTVIKNALDILKV 555

Query: 580 ESPNEM 585
            +P  M
Sbjct: 556 TAPERM 561


>gi|167629021|ref|YP_001679520.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687992|sp|B0TI89|SYR_HELMI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167591761|gb|ABZ83509.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 563

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 199/563 (35%), Positives = 309/563 (54%), Gaps = 46/563 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +E PR+  HG  +TN AM+++R   ++P  +AE IVARI     +  V +AG GFIN  
Sbjct: 37  ALEVPREKQHGDFATNVAMLMAREARMNPRQLAEKIVARIDRGDWLKDVQVAGPGFINFT 96

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  ++L  +L ++  +   YG + +G G +V +EFVSANPTG +H+G+ R A +GDTLA+
Sbjct: 97  LHHAWLYPVLPAVQQADEAYGASKVGAGRRVQVEFVSANPTGLLHMGNARGAALGDTLAN 156

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +G++V +E+YINDAG QI   A S+  RY Q L   D   PE  Y G  +    + 
Sbjct: 157 LLRLAGFDVQKEFYINDAGNQIENFAKSLEARYLQ-LLGRDVPFPEEGYHGEDIVETMRG 215

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L  K   + L         ++  Y+++  +  IR  L+   + +D++ SE   H  D   
Sbjct: 216 LIAKEGDKYLALESSLRREMLVKYALREKLDAIRRTLERFGVVYDVWFSEQSLH--DSGA 273

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I+  ++ L   GY+YE                +   L F++T +G++ D  L++S+G  T
Sbjct: 274 IQQTLERLRANGYIYE----------------NEGALWFKATALGEEKDEVLVRSNGIPT 317

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFAAD+AY K K++RGFD +I + G+DH G+V R++    AV     +++V+L +LVRLY
Sbjct: 318 YFAADIAYHKNKFDRGFDWVINIWGADHHGHVSRMKNAVKAVGYDPKKLDVILMQLVRLY 377

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           + G  ++MSKR G +ITL  +++EVG D+ RF  + R     LDFD    K QS ENPVF
Sbjct: 378 KGGEIVRMSKRTGQYITLDELIEEVGKDAARFFFVMRGADAHLDFDLDLAKRQSSENPVF 437

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----------SELQLIVHL 502
           YVQYA+AR  SI R A++              +PQ  + +           +EL LI  +
Sbjct: 438 YVQYAHARICSILRTAQE----------AGYAVPQGQQVEAGLDLTVLDHPAELALIRKI 487

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A+ P  +  A    EP+++A Y  DLA++FH  ++H R       V  + ++L   RL L
Sbjct: 488 ADLPDEVARAATQMEPHRMARYAQDLAALFHSFYTHCR-------VLTDEKELRDARLLL 540

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V     ++ + L+ +G+ +P  M
Sbjct: 541 VDDSRIVLRNVLHCMGLTAPERM 563


>gi|224475751|ref|YP_002633357.1| arginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782982|sp|B9DKQ7|SYR_STACT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222420358|emb|CAL27172.1| putative arginyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 554

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 203/560 (36%), Positives = 313/560 (55%), Gaps = 40/560 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89
            + +E P+D  +G  STN AM+L++    +P  IA+ IV  + K   +V+ + IAG GFI
Sbjct: 30  EVKVEIPKDPKNGDYSTNIAMVLTKIAKRNPHEIAQAIVDHLDKSKANVEKIEIAGPGFI 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N YL+  YL  ++   +    ++GRN   K  KV +E+VSANPTG +H+GH R A VGDT
Sbjct: 90  NFYLNNQYLTAVIPEALEKDKDFGRNEDPKHQKVLVEYVSANPTGDLHIGHARNAAVGDT 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L++++  +GY+VTREYYINDAG QI  LA S+  RY QA+   +++LP   Y G  + ++
Sbjct: 150 LSNILDAAGYDVTREYYINDAGNQITNLAHSIEARYDQAM-GKETELPADGYYGKDIINI 208

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           GK+LA+K   EL + PE++ L + +   V   M+ ++ DL   N   D + SE   +  D
Sbjct: 209 GKDLAEK-RPELKDLPEDERLKVFRQLGVDYEMEKLKKDLADFNTHFDGWFSETTLY--D 265

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I+ +++ +   GY YE                       R+T   DD DR ++K DG
Sbjct: 266 KGEIKKVLELMKENGYTYEA----------------DGATWLRTTDFNDDKDRVIIKKDG 309

Query: 330 SYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           SYTYF  D+AY   K+ R  G D +I + G+DH GY+ RL+A          ++ + + +
Sbjct: 310 SYTYFLPDVAYHYDKFHRDGGQDILINLFGADHHGYINRLKASVETYGIDADRLEIQIMQ 369

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +VRL +DG  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KE S 
Sbjct: 370 MVRLMQDGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDTHFDFDMELAKENSA 429

Query: 448 ENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           ENPV+Y QYA+AR  SI +QA  + I P  + D    +VI  +   D     L+  +AE+
Sbjct: 430 ENPVYYAQYAHARISSILKQAGERGITPSENADF---SVITNDKAID-----LLKKVAEF 481

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             +IE+A   + P+++  Y+ +LAS FH  ++  +       V  ++ K T   + ++ A
Sbjct: 482 EPMIESAAEHRAPHRVTNYIQELASAFHKFYNADK-------VLTDDEKKTQAYVSMIAA 534

Query: 566 VASIINSGLNIIGVESPNEM 585
           V   + + L ++GV +P+ M
Sbjct: 535 VQITLRNALALVGVSAPHNM 554


>gi|228475105|ref|ZP_04059832.1| arginine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314937074|ref|ZP_07844421.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228270869|gb|EEK12266.1| arginine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313655693|gb|EFS19438.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 553

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 205/581 (35%), Positives = 316/581 (54%), Gaps = 43/581 (7%)

Query: 12  KNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  ++EI+  IK      D   I +E P+D  +G  STN AM+L++    +P  IA+ IV
Sbjct: 9   KTLIQEIEASIKKANLAEDIPEIKVEIPKDTKNGDYSTNIAMVLTKIAKRNPRDIAQAIV 68

Query: 70  ARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             +     +V  V IAG GFIN YL   YL  ++S  +  G ++G     K  K+ +E+V
Sbjct: 69  DNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPKNKKILLEYV 128

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +H+GH R A VGD+LA+++  +GY+VTREYYINDAG QI  LA S+  R+ +A
Sbjct: 129 SANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEA 188

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M  ++ D
Sbjct: 189 LGDTSHEMPADGYNGKDIVEIGKDLAKKHP-EMKDYSDEERLKTFRQLGVDYEMDKLKKD 247

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L   N+  D + SE   +      I + ++ +   GY YE                    
Sbjct: 248 LSDFNVHFDNWFSETSLYEN--GAIDNTLEKMHELGYTYEA----------------DGA 289

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
              R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+
Sbjct: 290 TWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLK 349

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  
Sbjct: 350 ASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTM 409

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNV 484
           R      DFD    KEQS++NP++Y QYA+AR  SI +QAK    +I  + DF     + 
Sbjct: 410 RSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNADF-----ST 464

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I  E   D     L+  +AE+   IE+A  ++ P++L  Y+ DLAS FH  ++  +    
Sbjct: 465 ITNEKAID-----LLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAEK---- 515

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V +++ + T   + L+ AV   +++ L ++GV +P  M
Sbjct: 516 ---VLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM 553


>gi|297545501|ref|YP_003677803.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843276|gb|ADH61792.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 561

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 197/546 (36%), Positives = 313/546 (57%), Gaps = 33/546 (6%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRK 100
           HG L+ N AMI+++   + P  IAE+IV+++      ++ + +AG GFIN +L+  +L +
Sbjct: 47  HGDLAINTAMIMAKQAKMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEE 106

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            L  +   G +YGR  IGKG KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+
Sbjct: 107 TLKLVYKRGKDYGRVNIGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYD 166

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y  +
Sbjct: 167 VTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYGDK 225

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             + P E+    + +Y ++  ++ I++DL+   I++D++ SE   +  D   +  +I+ L
Sbjct: 226 YKDAPSEERRKALVEYGLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEEL 283

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            ++GY YE                    L F+ T+ G + D  L++++G  TY A+D+AY
Sbjct: 284 KQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAY 327

Query: 341 FKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            K K+  RGFD +I V G+DH G++  ++    A+     +++V+L +LV+L   G  +K
Sbjct: 328 HKNKFITRGFDWVINVWGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVK 387

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+A
Sbjct: 388 MSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHA 447

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SI RQ ++     + D    +++ +E E D     LI  LA +P  I  A     P+
Sbjct: 448 RICSIIRQLEEKVKIENIDEVDLSLLKEEEEKD-----LIKKLAYFPEEITIAARTLTPH 502

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++  Y+ D+AS+FH  ++    + R++ V+ N   L   R  L+ AV ++I + L+I+ +
Sbjct: 503 RITRYVLDVASLFHSFYN----SHRVKGVEEN---LMKARFVLILAVKTVIKNALDILKI 555

Query: 580 ESPNEM 585
            +P  M
Sbjct: 556 TAPERM 561


>gi|20808887|ref|NP_624058.1| arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|23822189|sp|Q8R786|SYR_THETN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|20517545|gb|AAM25662.1| Arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 562

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 198/560 (35%), Positives = 316/560 (56%), Gaps = 40/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           + +E P++  HG L+TN AM+++R   + P  IAE+I +++      ++ V +AG GFIN
Sbjct: 37  VEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIAEIIASKMNTSGTFIEKVEVAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+ ++L + L  I   G +YGR  +GKG KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 97  FFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQVEFVSANPTGPMHMGNARGGAIGDVL 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           AS++ ++GY V+RE+YINDAG QI     S+  RY Q L   D+++PEG Y G  +    
Sbjct: 157 ASILDYAGYNVSREFYINDAGNQIEKFGYSLEARYLQ-LLGIDAEVPEGGYHGEDIIDRA 215

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  + +  +  + P E+    + +Y ++  ++ +++DL    I++D++ SE   +  D 
Sbjct: 216 KEFLEIHGDKYKDVPSEERRKALIEYGLKKNIEKMKEDLVLYGIEYDVWFSEQSLY--DS 273

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  +I+ L  +GY YE                    L F+ T+ G + D  L++S+G 
Sbjct: 274 GEVYKVIEELTEKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGV 317

Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            TY A+D+AY K K+  RGFD +I V G+DH G+V  ++    A+     +++V+L +LV
Sbjct: 318 PTYLASDIAYHKNKFVTRGFDWVINVWGADHHGHVAPMKGAMKALGIDPNRLDVVLMQLV 377

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L   G  ++MSKR G  ITLR +++EVG D+ RF    R     ++FD    K+Q+ EN
Sbjct: 378 KLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAARFFFNMRSPDSPIEFDLDLAKQQTNEN 437

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           PVFYVQYA+AR  SI RQ +++   +    D DL    ++ +E E D     LI  LA +
Sbjct: 438 PVFYVQYAHARICSIIRQLEEMGVKIENIEDVDL---GLLKEEEEVD-----LIKKLAYF 489

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  I  A     P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ A
Sbjct: 490 PEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR-------VKGAEENLMKARFALILA 542

Query: 566 VASIINSGLNIIGVESPNEM 585
           V +++ + L+I+ V +P  M
Sbjct: 543 VKTVLKNALDILKVTAPERM 562


>gi|92112735|ref|YP_572663.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123265793|sp|Q1QZZ4|SYR_CHRSD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91795825|gb|ABE57964.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 561

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 206/567 (36%), Positives = 309/567 (54%), Gaps = 48/567 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E  +D AHG  ++N A+ L++P G  P  +AE +VA +     +  V IAG GFIN 
Sbjct: 30  VKVEPTKDKAHGDYASNLALTLAKPAGRKPRDLAEALVAALPPSDAIRQVDIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +     +++ +I+ +G  +GR+L G G KV +EFVSANPTGP+HVGH R A +GD L 
Sbjct: 90  FAATDAAAQVVPAILDAGDTFGRSLSGAGEKVQVEFVSANPTGPLHVGHGRGAAIGDCLC 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+  +G+EVTRE+Y NDAGAQI  LALSV  R  Q L  +D+  PE  Y G Y+  V +
Sbjct: 150 RLLEATGFEVTREFYYNDAGAQIQNLALSVQARV-QGLTPDDAAWPEDGYRGAYINDVAQ 208

Query: 212 E-------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                   +AD         P++  L  ++D++V  + +    DLKA  +  D++  E  
Sbjct: 209 AYLAGETVVADDRDVTASAAPDD--LDAIRDFAVAYLRREQDLDLKAFGVAFDVYFLESS 266

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +  D   +   +  L   G+ YE                +      R+T  GDD DR +
Sbjct: 267 LY--DDGKVDATVKALVEGGHTYE----------------EDGATWLRTTDFGDDKDRVM 308

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--IN 382
            K DG YTYF  D+AY   K++RGF  +I   G+DH   V R+ A   A+     Q   +
Sbjct: 309 RKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQALEAGIPQGWPD 368

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G+ +K+SKRAG ++TLR ++DEVG D+ RF +  R++   L FD    
Sbjct: 369 YVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGRDATRFFLAARRSDSQLTFDIDLA 428

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV----IPQESEFDTSELQL 498
           + QS +NPV+Y+QYA+AR  S+ R+A+D     D DL  +++     PQE E       L
Sbjct: 429 RSQSNDNPVYYIQYAHARVCSVMRRAQDAGKAFDRDLAMQHLGRLDAPQEKE-------L 481

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  LA YP V+E A   +EP ++A YL DLA+ FH  ++  +       V   + +L   
Sbjct: 482 MNRLARYPEVVERAARMREPQQVAQYLMDLAADFHTCYNAVK-------VMVEDDELRNA 534

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   +I +GL+++GV +P EM
Sbjct: 535 RLALGLATRQVIRNGLDLMGVSAPEEM 561


>gi|304315735|ref|YP_003850880.1| arginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777237|gb|ADL67796.1| arginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 562

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 208/561 (37%), Positives = 320/561 (57%), Gaps = 42/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I IE P++   G LS N AM++++   + P  IAE+I   +K+    +D V IAG GF+N
Sbjct: 37  IEIEEPKEKQFGDLSINTAMVMAKSAKMPPRKIAEIIKDGLKLKGTLIDKVEIAGPGFMN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YLS  Y  + L  I   G +YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 97  FYLSEDYKVEALKLIKRKGSDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDAL 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +S++ ++GY+VTRE+YINDAG QI    LS+  RY + L    +++PEG Y G  +    
Sbjct: 157 SSILDYAGYDVTREFYINDAGNQIEKFGLSLEARYLE-LLGEHAEVPEGGYHGDDIIERA 215

Query: 211 KELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           KE  + Y  +  +  PE++   +V+ Y ++  ++ +++DL+A  I++D++ SE+  H  +
Sbjct: 216 KEFLELYGDKYKDAAPEDRRKALVQ-YGLKKNIEKLKEDLEAYGIEYDVWFSENTLH--E 272

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +ID L  +GY YE                    L F+ T+ G + D  L++++G
Sbjct: 273 SGEVESVIDELKEKGYTYE----------------KDGALWFKETLFGAEKDDVLVRANG 316

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
             TY A+D+AY K K+ +RGFD +I + G+DH G+V  ++    A+     +++VLL +L
Sbjct: 317 YPTYLASDIAYHKNKFVKRGFDWVIDIWGADHHGHVAPMKGAMKALGIDPDKLDVLLMQL 376

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL +    +KMSKR G  +TLR ++DEVG D+ RF    R     +DFD     EQS E
Sbjct: 377 VRLMKGKEVVKMSKRTGKMVTLRDLIDEVGKDAARFFFNMRSADSAVDFDMDLAVEQSNE 436

Query: 449 NPVFYVQYAYARCRSIFRQAKD--IFPD--LDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           NPVFYVQYA+AR  SI RQ KD  I  D   D DL   N++ +E+E D     LI  LA 
Sbjct: 437 NPVFYVQYAHARICSIIRQLKDDGINTDDLKDVDL---NLLNEEAEID-----LIKKLAY 488

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            P  +  A     P+++  Y+ D+AS+FH  ++  R       V+  + +L   R+ L+ 
Sbjct: 489 LPEEVTIAAKTMAPHRITRYILDVASLFHTFYNSCR-------VRGVDEELMKARIVLID 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           +   +I + L+++ + +P +M
Sbjct: 542 STRIVIKNVLDMLKITAPEKM 562


>gi|315604827|ref|ZP_07879886.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313498|gb|EFU61556.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 559

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 316/572 (55%), Gaps = 41/572 (7%)

Query: 21  KIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
           +I ++  ++ D + +ERPR   HG  +TN AM L +  G+ P   A+++   +    D+D
Sbjct: 22  RISIDPALVPDPVTVERPRIREHGDWATNVAMQLGKKAGMAPRDFAQILAEDLSGAEDID 81

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           SV +AG GFIN+ L      ++  +IV +G  YGRN    G  +N+E+VSANPTGP+H+G
Sbjct: 82  SVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLAGRSINLEYVSANPTGPVHLG 141

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
             R A VGD+LA LMA SG  VTREYY ND G+QI+  + S++ R          ++PE 
Sbjct: 142 SVRWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDHFSHSLYARAM------GREVPED 195

Query: 200 YYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            Y G Y+  + +++ AD  ++   + +  PEE+ + + +   V+ M   I++ L +  + 
Sbjct: 196 GYGGQYIADIAEQVRADARAAGEPDPITLPEEEAIEVFRARGVELMFAEIKERLHSFRVD 255

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D+F  ED  H      + D I  L  +G +++                +   +  R+T 
Sbjct: 256 FDVFFHEDSLH--SSGAVADAIARLRERGEIFD----------------EGGAVWLRTTT 297

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GDD DR L+KSDG   YFA D+AY+  K ERG D  IY++G+DH GY+ R+ A+ AA  
Sbjct: 298 YGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADAAIYLLGADHHGYIGRMMAMCAAFG 357

Query: 376 EKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +K    + +L+ +LV L +DG P++MSKRAG  +TL  +VD VG D+ R+ ++       
Sbjct: 358 DKPGVNLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAVGVDAARYALVRVSMDTQ 417

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +D D   + + S +NPV+YVQYA+ R  ++ R A       D    P  +   ++E D++
Sbjct: 418 VDIDLDLLSQHSNDNPVYYVQYAHVRTCNVARNAAAHGVSRDAGFDPAAL---DTEADSA 474

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNR 553
              L+  LA++P  +  AT  +EP+++A YL  LA+ +H  +   R  PR    V+A + 
Sbjct: 475 ---LLGALAQFPAQVAQATELREPHRIARYLESLAATYHAWYGQCRVTPRSDDPVEAGH- 530

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 531 ---VARLWLNDAVTQVLRTGLGLLGVSAPERM 559


>gi|70727292|ref|YP_254208.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|109895040|sp|Q4L425|SYR_STAHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68448018|dbj|BAE05602.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 553

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 200/560 (35%), Positives = 304/560 (54%), Gaps = 41/560 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFI 89
            I +E P+D  +G  STN AM+L++    +P  IA+ IV  +     +V  V IAG GFI
Sbjct: 30  EIKVEIPKDTKNGDYSTNIAMVLTKVAKRNPREIAQAIVDNLDTSKANVKQVDIAGPGFI 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N YL   YL  ++   +  G ++G     K T + +E+VSANPTG +H+GH R A VGD+
Sbjct: 90  NFYLDNQYLTAVIPEAINKGDKFGCAEESKNTNILLEYVSANPTGDLHIGHARNAAVGDS 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +   ++P   Y G  +  +
Sbjct: 150 LANILIAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDTSHEMPADGYNGKDIIEI 209

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           GK+LADK+  E+ ++ +E+ L   +   V   M  ++ DL   N+  D + SE   +   
Sbjct: 210 GKDLADKHP-EMKDYSDEERLKTFRQLGVDYEMDKLKKDLADFNVHFDNWFSETSLYEN- 267

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I + +  +   GY YE                       R++   DD DR L+K DG
Sbjct: 268 -GAIDNTLAKMNELGYTYEA----------------DGATWLRTSDFKDDKDRVLIKKDG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A          ++ + + ++V
Sbjct: 311 TYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASLETFGVDSNRLEIQIMQMV 370

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RL +DG+ +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KE+S++N
Sbjct: 371 RLMQDGVEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDSHFDFDLELAKEKSQDN 430

Query: 450 PVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           P++Y QYA+AR  SI +QAK    ++  D DF     + I  E   D     L+  +AE+
Sbjct: 431 PIYYAQYAHARICSILKQAKEQGVEVTADADF-----STITNEKAID-----LLKKVAEF 480

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              IE+A   + P++L  Y+ DLAS FH  ++  +       V  ++ + T   + LV A
Sbjct: 481 EPTIESAAENRAPHRLTNYIQDLASAFHKFYNAEK-------VLTDDAEKTKAHIALVDA 533

Query: 566 VASIINSGLNIIGVESPNEM 585
           V   +++ L ++GV +P  M
Sbjct: 534 VRITLHNALALVGVSAPESM 553


>gi|223042942|ref|ZP_03612990.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443796|gb|EEE49893.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 553

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 205/578 (35%), Positives = 312/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  IK      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEASIKKAGLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDNL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  + IAG GFIN YL   YL +I+   +  G ++G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIETRYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++PE  Y G  +  +GK+LA+K+  E+ ++ +E+ L   +   V   M  ++ DL  
Sbjct: 192 TSHEMPEDGYNGKDIIEIGKDLANKHP-EIKDYSDEERLKTFRQLGVDYEMDKLKRDLAD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I + +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIDNTLAKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI RQAK    DI  + +FD      I  
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTNANFD-----TITN 467

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           E   D     L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 468 EKAID-----LLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553


>gi|314932835|ref|ZP_07840204.1| arginine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654516|gb|EFS18269.1| arginine--tRNA ligase [Staphylococcus caprae C87]
          Length = 553

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 205/578 (35%), Positives = 312/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  IK      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEASIKKAGLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDNL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  + IAG GFIN YL   YL +I+   +  G ++G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIETRYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++PE  Y G  +  +GK+LA+K+  E+ ++ +E+ L   +   V   M  ++ DL  
Sbjct: 192 TSHEMPEDGYNGKDIIEIGKDLANKHP-EIKDYSDEERLKTFRQLGVDYEMDKLKRDLAD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I + +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIDNTLAKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGDDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI RQAK    DI  + +FD      I  
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTNANFD-----TITN 467

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           E   D     L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 468 EKAID-----LLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553


>gi|292669448|ref|ZP_06602874.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648901|gb|EFF66873.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 552

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 202/561 (36%), Positives = 297/561 (52%), Gaps = 34/561 (6%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E   L RI++E P +   G  +TN AM  +R     P  IA  I   +  D  +D   IA
Sbjct: 26  ESGALPRILLEEPPEKELGDFATNFAMQSARVFRQPPQKIAAAIKEHLMGDW-LDHAEIA 84

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+NLYL  + L   L +++ +G EYG+    +   + +E+VSANPTGP+HVGH R A
Sbjct: 85  GPGFLNLYLKKTVLADTLRAVLAAGEEYGQLPAQEAGHIQVEYVSANPTGPLHVGHGRGA 144

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VG  L  L+  +GY V  EYY+NDAG Q+N LA+SV  RY + L    +  PE  Y G 
Sbjct: 145 AVGSALVKLLRTAGYAVDSEYYVNDAGNQMNLLAVSVNARYLE-LLGKPAVFPENGYHGA 203

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +    + + D+   + L   EE+ L I +D + +  +  + +DL    +  D + SE  
Sbjct: 204 DIVDTAQRIIDRDGDKYLLLSEEERLQIFQDLAYREKLAALEEDLADFGVTFDRWFSERT 263

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            H   P  +R ++D L  +G  YE                    +  RST  GDD DR +
Sbjct: 264 LH---PGAVRRVVDVLLERGSAYE----------------KDGAVWLRSTDYGDDKDRVI 304

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            + +G  TY AAD+AY   KY RG+  MI + G+DH GYV R++A  AA+ +   ++ VL
Sbjct: 305 FRDNGVPTYLAADIAYHADKYARGYGRMINIWGADHHGYVARVKAAIAALGDDPERLTVL 364

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V LYRDG  +K+SKR G+ +TLR +++EVG D+ R+  L R     LDFD    K+
Sbjct: 365 LLQMVSLYRDGALVKLSKRTGETVTLRELMEEVGVDAARYFFLMRSLDSQLDFDLDLAKK 424

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           ++ ENPV+Y+QYA+AR  SIFRQA +        +  ++    E   D +E+ LI  +A 
Sbjct: 425 RTNENPVYYIQYAHARISSIFRQADEA------GIAAKDGAELELLTDETEIALIKKIAA 478

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP  I  A     P ++A Y ++LA  FH  ++  R       +      L   RL LV 
Sbjct: 479 YPEEIARAAAELAPQRIARYSHELAGAFHSFYNKCR-------IIGQEPALASARLALVS 531

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   +I + L ++GV +P +M
Sbjct: 532 AAGRVIRNSLGVLGVSAPEKM 552


>gi|257062918|ref|YP_003142590.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256790571|gb|ACV21241.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 583

 Score =  342 bits (878), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 198/569 (34%), Positives = 312/569 (54%), Gaps = 39/569 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           + +ERPRD  HG  +   A+  ++    +P  +A+ IV  +  +PD V+ V IAG GFIN
Sbjct: 32  VTLERPRDEGHGDWACTVALRCAKQAKKNPREVAQTIVDYMP-EPDFVEKVEIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
            YL    L+ ++  +     +YG+  I +G + V IE++S+NPTGPMHVGH R A +G  
Sbjct: 91  FYLKHDALQNVVVKVREQKGDYGKGTIPEGMRRVQIEYISSNPTGPMHVGHGRWAALGSA 150

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A++M  +GY+V  E+YIND G Q++   +S+  RY Q L   D+ +PEG Y G+Y+  +
Sbjct: 151 MANVMRHAGYDVFEEFYINDHGVQMDKFGVSIVARYLQQLGQADAAVPEGGYNGLYVNDI 210

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR-------DDLKALNIQHDIFISE 262
            K + D+   + +N  E + +   +++    +M  IR       +  +    + +++   
Sbjct: 211 AKAIIDRDGDKWVNADEHERMVEFREFGYAYIMDNIRSTCERFGNHFERWQSERELYAPS 270

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           DDF     SP+  I+D L  QG +Y+                +   + FRS+  GD+ DR
Sbjct: 271 DDFWFDGRSPVEAILDKLREQGDIYD----------------EDGAVWFRSSAYGDEKDR 314

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L KSDG+YTYFA+D+AY   K  RGFD++I + G+DH GY+ R+ AV AA     A + 
Sbjct: 315 VLQKSDGAYTYFASDVAYHYLKKMRGFDHLIDIWGADHHGYIARVAAVLAAEGFPGA-LE 373

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V+L +LV L+RDG P++MSKR G+ IT   ++DEVG D+ R+ ML R + + +DFD    
Sbjct: 374 VVLGQLVNLFRDGKPVRMSKRTGEMITFEELIDEVGIDATRYWMLDRSSDQPIDFDIEVA 433

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPD--LDFDLFPRNVIPQESEFDT----SEL 496
           K     NPV+Y QYA+AR  S+ R A     +  LD D      IP + +        EL
Sbjct: 434 KRADDSNPVYYDQYAHARICSLLRNASGHAGEDNLDMDAVATECIPADVDLSVLSAPEEL 493

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  ++E+  +I  A   + P++L  Y Y+LAS+FH  +++         ++A +  L 
Sbjct: 494 ALMRKMSEFGDMIALAARDRAPFRLTHYAYELASLFHSFYAN------CPVLKAEDEGLK 547

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L  A   ++   LN++G+ +P  M
Sbjct: 548 QARLALADATRIVMAITLNLLGISAPQRM 576


>gi|311898368|dbj|BAJ30776.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 551

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/558 (35%), Positives = 309/558 (55%), Gaps = 37/558 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + + +ERP++  HG  +TN A+ L++P G  P  +AE++  R++    V  V IAG GF+
Sbjct: 29  EHVTVERPKNRDHGDYATNVALQLAKPAGRPPRAVAEILAGRLRGITGVAKVDIAGPGFL 88

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++  +IV +G  YGRN   KG ++N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 89  NITLDAATQGELARTIVEAGEAYGRNEALKGLRINLEFVSANPTGPIHIGGVRWAAVGDS 148

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G EV+ EYY+NDAG QI   A S+          N   +PE  Y G Y+  +
Sbjct: 149 LARVLKATGAEVSTEYYLNDAGVQITKFAKSL------KASANGQPVPEDGYVGEYIADI 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K + +     +L+ PE++ L + +   ++ M+  I+  +    +  D + SE   H  D
Sbjct: 203 AKAVTEGVPG-VLDLPEDEQLQVFRTEGLKLMVAEIQRSMAEFGVHFDTWFSERTLH--D 259

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRPLLKSD 328
              +   I+ L  QG+V+                 DR+  ++ R+T  GDD DR L+K+D
Sbjct: 260 SGAVEKAIERLREQGHVF-----------------DREGAIWLRTTDFGDDKDRVLIKAD 302

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AVSEKKAQINVLLCE 387
           G  TYFAAD AY+  K +RG +  +Y++G+DH GYV RL+A+AA A  +    I V++ +
Sbjct: 303 GETTYFAADAAYYLSKRDRGAEVSVYMLGADHHGYVNRLKAIAACAGDDMDRNIEVMIGQ 362

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V++ RDG  +++SKRAG+ IT+  VVD +G D+ R+M++ +     +  D   V  Q+ 
Sbjct: 363 FVKMLRDGKEVRLSKRAGNIITIDDVVDWIGVDAARYMLVRQSTDSTITIDIDVVTSQTA 422

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ENPVFYVQYA+AR  ++ R A +       D  P  ++  E E D     L+  L E+PR
Sbjct: 423 ENPVFYVQYAHARMSAVQRNAVEKGITRSADFKP-ELLSSEWEND-----LLGQLGEFPR 476

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+  A   +EP+ +A YL  LA  +H  + + +  P+          LT  RL L  A  
Sbjct: 477 VLAKAGELREPHHVATYLEKLARSYHRFYDNCQILPK---GDEEVTDLTHARLWLADATR 533

Query: 568 SIINSGLNIIGVESPNEM 585
           + + +GL ++GV +P  M
Sbjct: 534 TTLANGLGLLGVSAPERM 551


>gi|288917938|ref|ZP_06412298.1| arginyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350727|gb|EFC84944.1| arginyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 567

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/571 (35%), Positives = 307/571 (53%), Gaps = 51/571 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERPR   HG  ++  AM L++     P  +AEL+ AR++  P V  V +AG GF+N+
Sbjct: 31  VTIERPRQPEHGDYASPVAMQLAKAARRPPRQVAELLAARLRTSPGVAEVEVAGPGFLNI 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+ + L  I  ++V  G  YGR    +G +VN+EFVSANPTGP+ +   R A VGD LA
Sbjct: 91  RLAGAALGGIAQAVVRGGAAYGRATTPRGLRVNLEFVSANPTGPVTLASTRWASVGDALA 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++A +GYEV  EYY+NDAG Q+     S+      AL    +  PE  Y G Y+  +  
Sbjct: 151 RVLAAAGYEVGTEYYVNDAGVQVERFGASIL----AALRGEPA--PENGYHGAYVAEIAA 204

Query: 212 EL--ADKYSSELL------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +  A+    +L+         +EK L +     V+ M+  IR  L    ++ D++ SE 
Sbjct: 205 RVVAANPGLEQLVAAGSGGQVADEKALAVCARDGVEMMLAEIRSTLAGFGVEFDLWKSER 264

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             H  +   +   I+ L  +G+V+               D D   +  R+T  GDD DR 
Sbjct: 265 SLH--EAGELTAAIEELRAKGHVF---------------DAD-GAVWLRTTDFGDDKDRA 306

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           L+KSDG  TYF AD AY++ K  RGFD + Y++G+DH GY+ RL A+AA   +   Q ++
Sbjct: 307 LVKSDGHPTYFCADAAYYRDKRRRGFDRLCYLLGADHHGYIGRLRAIAACFGDDPEQTLD 366

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V++ +LV L R G+ +KMSKRAG F+TL  +VD VG D+ R+ ++       LD D   +
Sbjct: 367 VIIGQLVTLSRGGVAVKMSKRAGTFLTLHDLVDAVGVDAARYSLVRASMDSSLDLDLDVI 426

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIF------PDLDFDLFPRNVIPQESEFDTSEL 496
             Q+ +NPVFYVQYA+AR  S+ R A  +       P  D +    +++  +      E+
Sbjct: 427 ARQTNDNPVFYVQYAHARISSLIRNAAALGLATSADPAFDVEAVDVSLLTHQ-----REV 481

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK-- 554
           +L+  L E PRVIE+A   + P+++A YL +LA  +H  +   R  P     Q +     
Sbjct: 482 ELLGALGELPRVIESAAALRAPHRIARYLEELAGTYHRFYDSCRVLP-----QGDEEATV 536

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LT  RL LV A   ++ +GL+++GV +P  M
Sbjct: 537 LTAARLLLVEATRVVLANGLHLLGVGAPERM 567


>gi|114567927|ref|YP_755081.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317211|sp|Q0AU94|SYR_SYNWW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114338862|gb|ABI69710.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 559

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/554 (35%), Positives = 312/554 (56%), Gaps = 32/554 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINL 91
           +IE PR+  HG  + N A++++R     P  IAE++V  ++     V+ + IAG GFIN 
Sbjct: 37  LIEVPREKEHGDFACNVALLMARQARQAPRAIAEVLVELMEASGRPVEKIEIAGAGFINF 96

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L  S+L +I   +  S  +YG N   K  KV +EFVSANPTG +H+G+ R   +GDTLA
Sbjct: 97  FLDRSWLYEIPLMVYKSKDKYGFNG-EKAKKVQVEFVSANPTGNLHMGNARGGAIGDTLA 155

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GYEV RE+YINDAG QI     S+  RY Q L  +D   PE  Y G  L    +
Sbjct: 156 NILERAGYEVEREFYINDAGNQIEIFTDSMEARYLQ-LTGHDVQFPENGYAGRDLIDTVR 214

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  +Y   L + P E+   I+ D++++  +  I+  L +  I +D++ SE   H  +  
Sbjct: 215 NIIARYGEGLYDLPREERRQIIVDFALEEKIDYIQKTLASFGINYDVWFSEKSLH--ENG 272

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I  + ++L  +GY+YE                      F+ST  GD+ D  +L+++G  
Sbjct: 273 KIMAVFNDLRDKGYIYES----------------EGAWWFKSTAFGDEKDEVVLRANGMP 316

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYF AD+AY + K+ERGFD +I V G+DH G+V R++    A+    A++++LL +LVRL
Sbjct: 317 TYFMADIAYHQNKFERGFDWVINVWGADHHGHVARMKGAIEALGYDPARLDILLMQLVRL 376

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           YR G  ++MSKR G  ++L  ++++VG D+ RF  + R     LDFD    +++S+ENPV
Sbjct: 377 YRGGNIVRMSKRTGTTVSLDELIEDVGKDAARFFFVMRSPDSHLDFDLELARQKSQENPV 436

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQYA+AR  SIFRQA+         +   N I      +  EL ++  +A++P  I  
Sbjct: 437 YYVQYAHARICSIFRQAR----AEGITMAEINEIDISCLKEEEELAILRKIADFPEEISI 492

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P+++A Y+ DLA++FH  ++H R       V  +NR L   RL L+      I+
Sbjct: 493 AARTLAPHRIARYVLDLAALFHSFYNHHR-------VLNDNRALQDARLLLMEITRITIH 545

Query: 572 SGLNIIGVESPNEM 585
           + L+++GV +P +M
Sbjct: 546 NALDVLGVAAPEQM 559


>gi|309775278|ref|ZP_07670287.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916941|gb|EFP62672.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 547

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 202/555 (36%), Positives = 304/555 (54%), Gaps = 37/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           IVIE P+D +HG  STN AM L+R L  +P  IAE +V  +  D  D++   IAG GFIN
Sbjct: 29  IVIEIPKDKSHGDYSTNVAMQLTRMLKNNPRKIAEAVVEALDKDAADIERCEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +  + L +I++ ++     YG N  G+G KVN+E+VSANPTG +H+GH R A  GD++
Sbjct: 89  FTIKNTSLAQIITRVLHEQDSYGHNNDGEGLKVNVEYVSANPTGDLHLGHARGAAWGDSI 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             LM  SGY+V REYY+NDAG QI  L  S+  RY++ L   D DLPE  Y G  +K++ 
Sbjct: 149 TRLMKASGYDVCREYYVNDAGNQIVNLGKSLQARYREHL-GLDFDLPEDGYHGEDVKNIA 207

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             +AD+Y    + + +   L   K+  +   +  IR DL    +  D++ SE      D 
Sbjct: 208 IAIADEYKDAYVEYNDAN-LKFFKEKGIAFELDKIRRDLDNFRVHFDVWSSEQSIR--DA 264

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +D L  +G  YE                +   L F +T  GDD DR L K DGS
Sbjct: 265 GKVEKALDVLHEKGLTYE----------------EDGALWFATTKFGDDKDRVLRKKDGS 308

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+AY K K +RGFD ++ ++G+DH GY+ RL+A   A+     ++ V + ++VR
Sbjct: 309 YTYLVPDIAYHKDKLDRGFDMLVDLLGADHHGYIPRLKASIEALGNNPDKLQVDIIQMVR 368

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ +T+R + +EVG D+VR+  + R     LDFD    ++QS +NP
Sbjct: 369 LVENGEEVKMSKRLGNAVTIRELCEEVGVDAVRYFFVQRAVDTHLDFDLGLARKQSNDNP 428

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y QYA+AR  SI RQA +I     F+L               E+ L+ ++ E+  V+ 
Sbjct: 429 VYYAQYAHARICSILRQASEIAEAQSFELLTHE----------KEIALMKYINEFTNVVS 478

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  ++ P+K+  Y+  LA  FH  ++  + N           +L+  RL L+ A    +
Sbjct: 479 DAARSRAPHKVCNYIQKLAQHFHSFYNVCKVN------DPQQPELSSQRLALLKATKITL 532

Query: 571 NSGLNIIGVESPNEM 585
            + L +IGV++  +M
Sbjct: 533 KNALYLIGVDAIEKM 547


>gi|307546356|ref|YP_003898835.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218380|emb|CBV43650.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 561

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 209/586 (35%), Positives = 319/586 (54%), Gaps = 40/586 (6%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S L+  L+++  +  +  ++   I ++  +D AHG  +TN A++L++P GL P  +AE +
Sbjct: 7   SLLERALEDLQRQAILPSELAPTIKVDPAKDKAHGDYATNLALMLAKPAGLKPRELAEKL 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           VA +     V  V IAG GFIN + +     +++  ++  G  +GR+L G+G KV +EFV
Sbjct: 67  VAALPDSEAVSKVEIAGPGFINFFAATDAAAQVVREVLDGGDAFGRSLTGQGQKVQVEFV 126

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+HVGH R A +GD L  L+  +G++VTRE+Y NDAGAQI+ LALSV  R +  
Sbjct: 127 SANPTGPLHVGHGRGAAIGDCLCRLLEATGFDVTREFYYNDAGAQISNLALSVQARAKGV 186

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAM 241
              +D+  P   Y G Y+  V K         AD         P++  L  ++D++V  +
Sbjct: 187 TPEDDA-WPADGYRGDYITDVAKAYLAGETVHADDRHVTAKADPDD--LDAIRDFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DL+A  +  D++  E   +R     + D    LA QG+ YE             
Sbjct: 244 RREQDLDLRAFGVAFDVYFLESSLYR--DGKVADTAKRLAEQGHTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     R+T  GDD DR + K DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 289 ---HDGATWLRTTDFGDDKDRVMRKRDGDYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345

Query: 362 GYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A  V   +   + +L ++V + R G+ +K+SKRAG ++TLR ++DEVG 
Sbjct: 346 STVTRVRAGLQALGVGIPEGWPDYVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R+    L FD    + QS +NPV+YVQYA+AR  S+ R+A+      D +L
Sbjct: 406 DATRFFLAARRADSQLTFDIDLARSQSNDNPVYYVQYAHARVCSMLRKAQADERPFDHEL 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              N+   ++E    E  L+  LA YP V+E A +A+EP ++A YL DLA+ FH  +   
Sbjct: 466 AMDNLALLDTE---QEKALLNRLARYPEVVERAALAREPQQIAQYLQDLAAEFHTCY--- 519

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N     V+ + R+    RL L  A   ++ +GL+++GV +P EM
Sbjct: 520 --NAVKVMVEDDARR--NARLALGLAARQVLRNGLDLLGVSAPEEM 561


>gi|222152067|ref|YP_002561227.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121196|dbj|BAH18531.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 551

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 197/557 (35%), Positives = 311/557 (55%), Gaps = 39/557 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  + +   DV  V IAG GFIN
Sbjct: 31  IKIENPKDTKNGDYATNIAMVLTKLAKRNPREIAQAIVDNLDVQKADVSKVDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            Y+  SYL  I++  +   +++G+    K  ++ +E+VSANPTG +H+GH R A VGDTL
Sbjct: 91  FYMDNSYLTGIITEALTKKVDFGKGE-PKDERILVEYVSANPTGSLHIGHARNAAVGDTL 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++++ +GY+V REYYINDAG QI  LA S+  R+ QAL   D  LP   Y G  +  +G
Sbjct: 150 SNVLSAAGYDVLREYYINDAGKQIENLAYSIEARFLQAL-GEDKALPADGYHGKDIIEIG 208

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E  +  E + +   +   +   M+ ++ DL   N+  D + SE   +    
Sbjct: 209 KDLAEKHP-EYKDVEEAERIKAFRKLGLDYEMEKLKKDLTEFNVHFDNWFSETSLYEN-- 265

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   ++ + ++GY++E                +      R+T  GDD DR L+K DGS
Sbjct: 266 KKIDKALEQMRQRGYIFE----------------EDGATWLRTTEFGDDKDRVLIKKDGS 309

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K ERG+D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 310 YTYFLPDIAYHYDKIERGYDTLINLFGADHHGYINRLKASLETFGVDSKRLEIQVMQMVR 369

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    K +S +NP
Sbjct: 370 LLQDGQEVKMSKRTGNAITLRDIMDEVGIDAARYFLTMRSPDSHFDFDMELAKSESSDNP 429

Query: 451 VFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           V+Y QYA+AR  S+ RQAK+  I P  D +     +I  E  F     +L+  +A++  V
Sbjct: 430 VYYAQYAHARICSMLRQAKEAGITPSRDANY---ALITNEKAF-----ELLKRVADFESV 481

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           IE A   + P+++  Y+ DLA+ FH  ++  +       V  ++ + +   + ++ AV  
Sbjct: 482 IEQAAEHRAPHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKSRAYVAMIEAVRI 534

Query: 569 IINSGLNIIGVESPNEM 585
            + + L ++GV SP +M
Sbjct: 535 TLQNALTLVGVSSPEKM 551


>gi|169832318|ref|YP_001718300.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688349|sp|B1I6Q5|SYR_DESAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169639162|gb|ACA60668.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 563

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 199/563 (35%), Positives = 324/563 (57%), Gaps = 46/563 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFI 89
             +E PR+  HG  +TN A++L++P    P  IAE++V+ + + P+  V  V +AG GFI
Sbjct: 38  FTVEVPREKNHGDFATNLALLLTKPARRSPRQIAEILVSHLSL-PELLVKEVTVAGPGFI 96

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L P++L  +L  I   G  YGR  +G G KV +EFVSANPTG +H+G+ R A +GD+
Sbjct: 97  NFRLDPNWLHGVLPEIETWGEHYGRRNLGGGRKVQVEFVSANPTGLLHMGNARGAALGDS 156

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-GYYPGVYLKH 208
           +A+L++F G++VTRE+Y+NDAG Q+  LALS+  RY QAL   D  +PE GY+    +  
Sbjct: 157 IAALLSFVGFDVTREFYVNDAGHQVENLALSMEARYFQAL-GRDWPVPEDGYHGEDLIDT 215

Query: 209 VGK---ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
            G+   E  D+++S     P+E+   +++ ++++  +  +R  L++  +++D++ SE   
Sbjct: 216 AGRFVAEHGDRFAS---GDPDERRGALLR-FALEEKLAAMRATLESFGVRYDVWFSEQSL 271

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  D   + + ++ L ++G++YE                    L F++   G D D  L+
Sbjct: 272 Y--DRGVVGETLELLKKRGHLYE----------------RDGALWFKAGAFGGDKDEVLV 313

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           + +G  TYFAAD+AY K KY+RGFD +I V G+DH G+V R++   AA+      ++V++
Sbjct: 314 RRNGVPTYFAADIAYHKDKYDRGFDWVINVWGADHHGHVPRMKGALAALGYDPDALDVVI 373

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +LVRLYR G  ++MSKR G ++TL  +++EVG D+ R+  + R     LDFD    K +
Sbjct: 374 MQLVRLYRGGEIVRMSKRTGRYVTLDELLEEVGRDAARYFFVTRGADSHLDFDLDLAKSR 433

Query: 446 SKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           + ENPV+Y+QYA+AR  SIFRQ ++     P   +   P   + +E     +E  LI  L
Sbjct: 434 TNENPVYYIQYAHARISSIFRQLEERGRTAP--GYRKIPDVTLLKEE----AERALIRRL 487

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P  +  A     P+++A Y++DLA +FH  ++  R       V      L   RL L
Sbjct: 488 ADFPDEVAQAAYDLAPHRIAHYVHDLAGLFHHFYNAHR-------VLGAGDGLEEARLML 540

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V+    ++ + L ++GV +P  M
Sbjct: 541 VNCTRVVLRNALTLLGVSAPERM 563


>gi|289207432|ref|YP_003459498.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943063|gb|ADC70762.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 587

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 204/590 (34%), Positives = 308/590 (52%), Gaps = 68/590 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + + R RD  HG  ++N AM L+RP    P  +AE + A +   P +    IAG GFIN 
Sbjct: 30  VQVTRARDREHGDFASNLAMQLARPAKAKPRDLAEALCAAMPAVPGLAGTEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+     ++L  I   G ++GR+ +G G  V +EFVSANPTGP+HVGH R A  G T+A
Sbjct: 90  RLAADARTQVLGRIAAQGADFGRSSVGNGRPVQVEFVSANPTGPLHVGHGRGAAFGATVA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+ F G++VTREYY+NDAG Q+N LA SV+ RY +  +      P   Y G Y+  V +
Sbjct: 150 DLLDFCGFDVTREYYVNDAGRQMNILAASVWLRYLEQ-HGVQVPFPTNGYQGDYIYPVAE 208

Query: 212 ELADKYSSELLNF---------PEE-----------------------KWLPIVKDYSVQ 239
            L  +   + ++          P+E                       +    V D  + 
Sbjct: 209 SLTAQIGEQAVHPATAVTRDLPPDEPAGGDKEVYIDAVIARARELLGPELYRTVFDCGLN 268

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A+++ IRDDL+   +++  + SE      D   I   + +L   G +YE           
Sbjct: 269 AILEDIRDDLREFGVEYQCWFSERSL--ADSGAIDAAVQDLQAHGALYE----------- 315

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L FRST  GDD DR + + +G YTYFA+D+AY + K++RGF+ +I + G+D
Sbjct: 316 -----QDGALWFRSTDYGDDKDRVVRRENGDYTYFASDIAYHREKFQRGFERVINIWGAD 370

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R+ A   A+  +  +++VLL +   LYR G  + MS RAG F+TLR + DEVGS
Sbjct: 371 HHGYVPRVRAALQALGLEADRLDVLLVQFAILYRGGERLPMSTRAGQFVTLRELRDEVGS 430

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL---- 475
           D+ RF  + R+  + LDFD    K QS +NP++Y+QYA+AR  S+ R A +         
Sbjct: 431 DAARFFYVQRRCDQHLDFDLDLAKSQSNDNPMYYIQYAHARIASVLRTAAERGHTASALD 490

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D  L      PQE +       L+  L  +P VI  A  A EP+++A YL +LA+ FH +
Sbjct: 491 DTGLSACLTEPQEDD-------LLDRLDRFPEVIAAAAEACEPHQIAQYLRELAAGFHTY 543

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++       + F+ A +  +   RL L+  +  ++++GL ++GV +P  M
Sbjct: 544 YNA------VPFLNAEDATVIGARLALLTGIKQVLHNGLRLLGVTAPERM 587


>gi|53802759|ref|YP_115476.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81680656|sp|Q602H4|SYR_METCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53756520|gb|AAU90811.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 586

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 210/588 (35%), Positives = 313/588 (53%), Gaps = 65/588 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IER RD AHG  + N AM+L++    DP  +AE I A +  DP V    IAG GFIN 
Sbjct: 30  LQIERTRDPAHGDFAANTAMLLAKSARCDPRRLAEKIRAALPEDPAVIRTEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L      ++++ I   G  +GR+ IG G +V +EFVSANPTGP+HVGH R A  G  +A
Sbjct: 90  FLDAIAQHRVITDIHSQGPGFGRSSIGAGQRVQVEFVSANPTGPLHVGHGRGAAYGAVVA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHV 209
            L+  +G++V REYY+NDAG Q++ LA SV+ RY   L N    LP     Y G Y++ +
Sbjct: 150 DLLEAAGFDVHREYYVNDAGRQMDILAASVWLRY---LENCGEVLPFPANGYRGEYVRDI 206

Query: 210 GKEL----ADKYSSE----LLNFP--------EEKWLPIVKDYS---------------- 237
             +L     ++Y +     LL  P        +E+++  V   S                
Sbjct: 207 ASDLYRTQGERYRTSADQVLLGLPPDEPQGGDKEEYIDAVVSKSKNLLGPERYREVFNAG 266

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + +++  IRDDL      +  + SE      +   +   ++ L   GYVYE         
Sbjct: 267 LDSILDDIRDDLGEFGTHYQEWFSERSLT--ETGAVERALERLKSSGYVYE--------- 315

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D  Q  F ST +GD+ DR L++ +G  TYFA+D+AY   K ERGFD ++ V G
Sbjct: 316 ------KDGAQW-FASTRLGDEKDRVLVRENGQTTYFASDVAYHLNKLERGFDRIVNVWG 368

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A   A+    +++ VLL +   LYR    ++MS R+G+F+TLR + +EV
Sbjct: 369 ADHHGYIPRVKAAIQALGGDASKLEVLLVQFAVLYRGTERVQMSTRSGEFVTLRQLRNEV 428

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ RF  + RK+ + +DFD      ++ ENPV+YVQYA+AR  S+FRQ  +     D 
Sbjct: 429 GKDAARFFYVMRKSDQHMDFDLKLATSRTNENPVYYVQYAHARVCSVFRQLDEKGWARDL 488

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
               R +   E   +  EL L+  L+ YP V+E A +   P+ L  YL DLA+ FHG+++
Sbjct: 489 G---RGMRRLERLCEPHELTLVASLSRYPEVVEQAALQYAPHHLVHYLRDLAAEFHGYYN 545

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   +F+   +  L   RL L+ AV  +I +GL ++GV +P  M
Sbjct: 546 S------CQFL-VEDGDLRDARLNLIDAVRQVIANGLGLLGVSAPETM 586


>gi|260886946|ref|ZP_05898209.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330839265|ref|YP_004413845.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260863008|gb|EEX77508.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329747029|gb|AEC00386.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 551

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 212/559 (37%), Positives = 303/559 (54%), Gaps = 38/559 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  I++E P D   G  +TN AM  +R   ++P  IAE +V+RI+ D  +D   IAG GF
Sbjct: 29  LADILLEVPPDKKFGDFATNFAMQSARVFRMNPKKIAEELVSRIEGDW-LDHAEIAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVG 147
           IN YL  + L  +L  I   G E   NL  K T ++ +E+VSANPTG +HVGH R A VG
Sbjct: 88  INFYLKGNVLYDLLRHIYEGG-EACFNLPQKDTARIMVEYVSANPTGLLHVGHGRGAAVG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
             L +L+  +GY V  EYYINDAG QI+ LA SV  RY + L   ++  PE  Y G  + 
Sbjct: 147 SALVNLLRAAGYPVHSEYYINDAGNQIDNLAASVNARYLE-LLGKETAFPENGYHGADII 205

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              K + +    + L+  EE+ L   K+ +++  +  +++DL A N+  D + SE   H 
Sbjct: 206 DTAKRIVEADGEKYLSLSEEQRLAAFKEIALKEKLAQLKEDLAAFNVTFDEWFSERTLH- 264

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
             P  +RD    L  +G VY               D D   L  RST  GDD DR +++ 
Sbjct: 265 --PEAVRDACQTLKEKGKVY---------------DKD-GALWLRSTDYGDDKDRVVIRD 306

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +G  TY AAD+AY + K ERGF ++I + G+DH GYV R++A  AA+     Q+ VLL +
Sbjct: 307 NGVPTYLAADIAYHRNKLERGFGHLINIWGADHHGYVCRVKAALAALGYAPEQLEVLLLQ 366

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V LYR G  +KMSKR G+ +TL  +++EVG+D+ R+  L R     LDFD    K  S 
Sbjct: 367 MVSLYRGGELVKMSKRTGESVTLEELIEEVGTDAARYFFLMRSLDSQLDFDLDLAKSHSN 426

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYP 506
           ENPV+Y+QYA+AR  SIFRQA D               P+ S   D +E+ LI  + EY 
Sbjct: 427 ENPVYYIQYAHARISSIFRQAADAG-------IETGGAPEFSRLIDETEIALIKKIEEYA 479

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE A   + P+++A + YD A +FH  ++  R       +      L+  RL LV   
Sbjct: 480 EEIERAARERAPHRIARFAYDTAGLFHSFYNKCR-------IVGVEPALSGARLALVAVA 532

Query: 567 ASIINSGLNIIGVESPNEM 585
            +++   L I+G+ +P +M
Sbjct: 533 RNVLRHALGILGISAPEKM 551


>gi|212703468|ref|ZP_03311596.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098]
 gi|212673082|gb|EEB33565.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098]
          Length = 551

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 203/569 (35%), Positives = 318/569 (55%), Gaps = 56/569 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89
           + VIE PRD  HG L+ N AM+L+R    +P  +A++ V ++ +   D++ V +AG GF 
Sbjct: 25  KAVIEPPRDPKHGDLAANIAMLLAREAHKNPRELAQVFVEKLPQRCADIEKVEVAGPGFC 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+  S  + RK +  +  +G  YG++ +G+G K  +E+VSANPTGP+HVGH R A VGD+
Sbjct: 85  NVTFSQHFWRKTVCEVEAAGAAYGQSSVGQGRKTLVEYVSANPTGPLHVGHGRGAAVGDS 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA L+  +G++V  EYYINDAG Q+  L LSV+ R ++ L     + PE YY G Y+  +
Sbjct: 145 LARLLRKAGFDVETEYYINDAGRQMRILGLSVWLRVKE-LAGRPVEWPEDYYRGSYIIDI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQ------AMMKI---IRDDLKALNIQHDIFI 260
            +E+            E+  LP ++D + Q      AM +I   I+ DL    ++H  + 
Sbjct: 204 AREM----------LAEDPSLPDMEDQAGQDRCYERAMNEILDGIKADLADFRVEHQHWF 253

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE      +   ++   D L   G+ +               D D     F +  +GDD 
Sbjct: 254 SEKTLV--ESGAVKAAFDALTEAGHTF---------------DKD-GAFWFATQALGDDK 295

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L KSDGS TYFA+D+AY   K++RG+D +I + G+DH GYV R+ A   A+ + +  
Sbjct: 296 DRVLRKSDGSLTYFASDIAYHHNKFQRGYDWLIDIWGADHHGYVPRMRAAITAMGKPRES 355

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
            +V+L +LV L + G P+ MS RAG F TL  VV EVG+D+ RFM L RK+   LDFD  
Sbjct: 356 FDVVLIQLVNLLQGGKPVSMSTRAGTFETLADVVKEVGADAARFMFLSRKSDTSLDFDLE 415

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSE-L 496
             K++S +NPV+YVQYA+AR  ++ R+A++     P    D          +  DT E +
Sbjct: 416 LAKQRSLDNPVYYVQYAHARICAVLRRAEERGITLPAAATDELL-------AALDTPEDM 468

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  +A +  ++  A  A   + ++ YL DLA + H +++      + + + A++   T
Sbjct: 469 ALLRKMAGFEDMVATAAQALAVHHVSHYLMDLAGMLHSYYA------KHQVLLADDTART 522

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + RL L+ AV+ ++ +GL+++GV +P  M
Sbjct: 523 LSRLALLRAVSQVLRNGLDLLGVSAPEVM 551


>gi|295099684|emb|CBK88773.1| arginyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 544

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 206/561 (36%), Positives = 306/561 (54%), Gaps = 48/561 (8%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + IVIE P+   HG  STN AM L+R L  +P  IAE IVA I+ + +V+ + IAG GFI
Sbjct: 27  NNIVIETPKVKDHGDFSTNVAMQLTRQLRQNPRMIAEKIVANIESE-NVEKMDIAGPGFI 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  LS     K++  ++     +G+     G KVN+E+VSANPTG +H+GH R A  GD+
Sbjct: 86  NFILSKGRFTKVIEEVLSKRENFGQQ-PSNGIKVNLEYVSANPTGSLHLGHARGAAWGDS 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
            A +M  +GY+VTREYY+NDAG QI  LALS+  RY+QA +  ++++ +  Y G  +K  
Sbjct: 145 CARIMKKAGYDVTREYYVNDAGNQITNLALSLNARYRQA-HGIETEIGQDGYLGEDVKQK 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++LA  Y  + L  P E+ L   +   ++  +  I+ DL    +  D++ SE      D
Sbjct: 204 AEQLAKDYPEKYLE-PTEENLKFFRKEGIKFELDKIKADLDNYRVHFDVWSSEQTIR--D 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +  L  +GY YE                    L F++T +GDD DR L K+DG
Sbjct: 261 SGDVDRALKVLDEKGYTYES----------------EGALWFKTTELGDDKDRVLRKTDG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           SYTY   D+AY   KY+RG+D ++  +G+DH GY+ RL+A   A+     ++NV + ++V
Sbjct: 305 SYTYLVPDIAYHNDKYKRGYDLLVDFLGADHHGYIPRLKASMQALGNDPDKLNVDIIQMV 364

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RL  DG  +KMSKR G+  T+  + D VG D+ R+  + R     LDFD    K QS +N
Sbjct: 365 RLVSDGKEVKMSKRLGNATTINELCDSVGVDAARYFFVQRALDSHLDFDIELAKRQSNDN 424

Query: 450 PVFYVQYAYARCRSIFRQAKDI-----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           PV+Y QYA+AR  SI +QAKDI     F DL                D  E++L+  L E
Sbjct: 425 PVYYAQYAHARMCSIQKQAKDIELADSFEDL---------------TDEKEIELMKTLQE 469

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           + +VI  +   ++ +K+  Y+  LAS FH  ++        + +  +N KL+  RL LV 
Sbjct: 470 FNKVIIESAKTRQVHKVCHYIQTLASKFHSFYN------ACKVIDRDNMKLSSQRLALVK 523

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ + L  +GVE+   M
Sbjct: 524 ATQIVLANALETVGVEAVESM 544


>gi|158312858|ref|YP_001505366.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|229558759|sp|A8L3U5|SYR_FRASN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158108263|gb|ABW10460.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 570

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 204/582 (35%), Positives = 306/582 (52%), Gaps = 54/582 (9%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           +E  + D + +ERPR   HG  ++  A+ L++     P  +AEL+ AR++ +  V  V +
Sbjct: 23  LEVAVPDSVTVERPRQPEHGDYASPVALQLAKAARRRPREVAELLAARLRAEAGVAEVEV 82

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+N+ L+ + L  I   IV  G  YGR  + +G +VN+EFVSANPTGP+ +   R 
Sbjct: 83  AGPGFLNIRLAGAALGGIARRIVRDGESYGRAAVSQGVRVNLEFVSANPTGPVTLASARW 142

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYY 201
           A VGD L+ + A +GYEV  EYY+NDAG Q+     SV    R Q A        P   Y
Sbjct: 143 AAVGDALSRVFAAAGYEVGTEYYVNDAGVQVERFGASVLAALRGQPA--------PADGY 194

Query: 202 PGVYLKHV-GKELADKYSSELL----------NFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            G Y+  +  K LA   + E L             ++K L +     V+ M+  IR  L 
Sbjct: 195 QGAYVAEIAAKVLAANPALEQLLAASGGEQDSGAEQDKALAVCARDGVELMLAEIRATLS 254

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +++D++ SE   H  +   +   ID L  QG+VYE                    + 
Sbjct: 255 GFGVEYDLWKSERSLH--EAGELIAAIDELRTQGHVYEA----------------GGAVW 296

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            R+T  GDD DR L+KSDG  TYF AD AY++ K  RGFD + Y++G+DH GY+ RL+A+
Sbjct: 297 LRTTDFGDDKDRALIKSDGRPTYFCADAAYYRDKRRRGFDRLCYLLGADHHGYIGRLKAI 356

Query: 371 AAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +A   +     ++VL+ ++V L R G+ +KMSKRAG+F+TL  +VD VG D+ R+ ++  
Sbjct: 357 SACFGDDPDHNLDVLIGQMVTLSRGGVAVKMSKRAGNFLTLHDLVDAVGVDAARYSLVRA 416

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF------PDLDFDLFPRN 483
                LD D   +  Q+ +NPVFYVQYA+AR  S+ R A  +       P  D D    +
Sbjct: 417 SMDSALDLDLDAIARQTNDNPVFYVQYAHARISSLIRNAAALGLATSADPAFDVDGVDVS 476

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++    E D     L+  L E PRV+E+A   + P+++A YL +LA  +H  +   R  P
Sbjct: 477 LLTHPREVD-----LLGALGELPRVVESAAELRAPHRIARYLEELAGTYHRFYDSCRVLP 531

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +T  RL L  A  +++ +GL ++GV +P  M
Sbjct: 532 Q---GDEEPTAITAARLLLAEATRTVLANGLRLLGVSAPERM 570


>gi|323706265|ref|ZP_08117832.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534429|gb|EGB24213.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 562

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 201/557 (36%), Positives = 318/557 (57%), Gaps = 34/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           + IE P++   G L+ N AMI+++P  + P  IAE+I   +K++   ++ V IAG GF+N
Sbjct: 37  VEIEEPKEKQFGDLAINTAMIMAKPAKMPPRKIAEIIKDGLKLEGTMIEKVEIAGPGFMN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+  Y  + L  I   G +YGR  IG G +V +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 97  FYLNDDYNVEALMLIKEKGPDYGRVNIGNGKRVQVEFVSANPTGPMHMGNARGGALGDAL 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +S++ ++GY+VTRE+YINDAG QI    LS+  RY Q L   D+++PEG Y G  +    
Sbjct: 157 SSILDYAGYDVTREFYINDAGNQIEKFGLSLEARYLQ-LLGEDAEVPEGGYHGDDIIERA 215

Query: 211 KELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           KE  + Y  +  +  PEE+   +++ Y ++  +  +++DL+A  I++D++ SE+  H  +
Sbjct: 216 KEFLELYGDKYKDADPEERRKALIQ-YGLKKNIAKLKEDLEAYGIEYDVWFSENTLH--E 272

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              ++ +I+ L  +GY YE                    L F+ T+ G + D  L++++G
Sbjct: 273 SGEVQSVIEELKEKGYTYE----------------KDGALWFKETLFGAEKDDVLVRANG 316

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
             TY A+D+AY K K+  RGFD +I + G+DH G+V  ++    A+     +++VLL +L
Sbjct: 317 FPTYLASDIAYHKNKFVTRGFDWVIDIWGADHHGHVAPMKGAMKALGIDPDRLDVLLMQL 376

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL +    ++MSKR G  +TLR ++DEVG D+ RF    R     +DFD     EQS E
Sbjct: 377 VRLMKGKEVVRMSKRTGKMVTLRDLIDEVGKDAARFFFNMRSADSAVDFDMDLAVEQSNE 436

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR  SI RQ K+    +D D      +   SE   +E+ LI  LA  P  
Sbjct: 437 NPVFYVQYAHARICSILRQLKE--DGIDTDNLKEVNLKLLSE--DTEISLIKKLAYLPEE 492

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A     P+++  Y+ D++S+FH  ++  R       V+  + +L   R+ L+ A   
Sbjct: 493 ITIAANTMAPHRITRYILDVSSLFHTFYNSCR-------VRGVDEELMKARIVLIDATRI 545

Query: 569 IINSGLNIIGVESPNEM 585
           +I + L+++ + +P +M
Sbjct: 546 VIKNVLDMLKITAPEKM 562


>gi|198282489|ref|YP_002218810.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665719|ref|YP_002424679.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226701628|sp|B7J3R6|SYR_ACIF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689961|sp|B5EL87|SYR_ACIF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|198247010|gb|ACH82603.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517932|gb|ACK78518.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 579

 Score =  339 bits (870), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 202/607 (33%), Positives = 323/607 (53%), Gaps = 62/607 (10%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           S  L+  L+++  + ++   I   + ++RP+   HGHL++N A++L++ +G  P  IA+ 
Sbjct: 6   SQALQGALQQLHAQGRI-PGIPATLELDRPKQVEHGHLASNVALLLAKAVGRKPRDIADD 64

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IVA +     +    IAG GFIN +L P+    ++  +      +G N  G G ++ +EF
Sbjct: 65  IVAALPASDWIARTEIAGPGFINFFLQPAAFHAVIHRVRTEKEHFGANRNGAGQRLQMEF 124

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+HVGH R A  G +LA+++ F+G+++  EYY+NDAG Q++ LA SV+ RY +
Sbjct: 125 VSANPTGPLHVGHGRGAAYGASLANILRFNGFDIFCEYYVNDAGRQMDILAASVYLRYLE 184

Query: 188 ALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSV----- 238
           A        PE  Y G Y++    H+ +++ D+     +  P    LP + D  +     
Sbjct: 185 ADKALPWPFPENGYRGDYVREIAAHLREQVGDRLRHAAVGLPN---LPQMSDGDIAIDTL 241

Query: 239 --------------------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                                 ++  IRDDL+   + ++ + SE      D   +   + 
Sbjct: 242 IAHLKQSLGEDYRTLHSAGLDEILADIRDDLEGFGVHYERWYSEGSLM--DTGAVDSAVA 299

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L + G+ Y           TQ+       L FR+T   DD DR L + +G+YTYFA+D+
Sbjct: 300 ALEKAGHCY-----------TQEG-----ALWFRATAFDDDKDRVLRRDNGAYTYFASDV 343

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ RGF ++I + G+DH GYV R++A   A+     Q+ V+L +   LYR    I
Sbjct: 344 AYHAEKFARGFTHVIDMWGADHHGYVPRVKAALRALGLDDQQLEVVLVQFAILYRGTEKI 403

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MS RAG+F+TLR + +EVG+D+ RF  + R+  + LDFD    K+ S+ENPVFY+QYA+
Sbjct: 404 SMSTRAGEFVTLRELREEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVFYIQYAH 463

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+ RQ+ +        L P + +  E   ++ E+ L   L  +P V+  A   +EP
Sbjct: 464 ARVYSLLRQSVEK----GLSLPPADGVGLEILQESREIALADALWRFPEVVATAARDREP 519

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++AFYL +LA+ FH +++  R       +      L   RL L  AVA  I +GL ++G
Sbjct: 520 HQIAFYLRELAAAFHTYYNSTR-------ILVEETPLRHARLTLCLAVAQSIANGLRLLG 572

Query: 579 VESPNEM 585
           V +P +M
Sbjct: 573 VSAPEQM 579


>gi|289432951|ref|YP_003462824.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946671|gb|ADC74368.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 556

 Score =  339 bits (870), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 317/555 (57%), Gaps = 34/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IE P+   +G  +T+  + L++  G  P+ +A+++ + I+    +  V +A  GFIN 
Sbjct: 35  ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAQILASYIETGSGISKVSVAPPGFINF 94

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             S  +L  ++ +I+     YG   +G G++V IEFVSANPTGP+H+GH R AV+G TL+
Sbjct: 95  TFSKEWLCSLVKTILTEAGSYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY V  E+YINDAG+QI+    ++F RYQQAL   D+ +P+  Y G Y+  +  
Sbjct: 155 NILKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAA 213

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  KY  + L  P +     + +  +  M+ +I DDLKAL +  DI+ SE   + G   
Sbjct: 214 EMVTKYGDKYLQMPADIAQNDLGEIGMTRMLCLISDDLKALKVDFDIWFSERSLYSG--G 271

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +  +D L+   Y+ E      +   T           F ST++GD  D  +++SDG+ 
Sbjct: 272 QYKTAMDILSGNNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFA+D+AY   K+ ER FD +I + G+DH G+V R++A+ +A+     ++  LL +++ 
Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMVSALGINPERLTTLLFQMIT 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  +++SKR G+ I+LR V++EVG+D+ RF  L R     +DFD    K++S ENP
Sbjct: 376 LKRGGELVRLSKRTGEIISLREVIEEVGADACRFFFLARSTESQMDFDLELAKKESAENP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI   A++    LD+     +    +   + +EL+LI  +AE P ++E
Sbjct: 436 VYYVQYAHARICSILHLAEE--NQLDY-----STGDTDLLGEEAELELIRKMAELPEIVE 488

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +   EP+ L +Y  +LA+ FH  +   R       V ++N +LT  RL+LV A   ++
Sbjct: 489 TVSRTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNAELTCARLKLVDASRIVL 541

Query: 571 NSGLNIIGVESPNEM 585
              L+++G+ SP  M
Sbjct: 542 ARTLHLMGMTSPESM 556


>gi|329734087|gb|EGG70406.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 553

 Score =  339 bits (870), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  I+      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEASIRKANLTEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G  +G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M+ ++ DL  
Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYSDEERLKTFRQLGVDYEMEKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I++ +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSEFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    ++  D DF     +    
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553


>gi|119715977|ref|YP_922942.1| arginyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536638|gb|ABL81255.1| arginyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 522

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 200/560 (35%), Positives = 317/560 (56%), Gaps = 44/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR   HG  +TN A+ L +  G++P  +A L+  R++    +  V IAG GF+N+
Sbjct: 1   MTVERPRSKEHGDYATNVALQLGKKAGMNPRDLATLVQQRLEQTDGIAGVDIAGPGFLNI 60

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            ++      + + IV +G  YG   + +G +VN+EF+SANPTGP+H+GH R AVVGD ++
Sbjct: 61  TVAAGAQGIVAAEIVDAGAAYGHTDVLRGERVNVEFISANPTGPLHLGHTRWAVVGDAIS 120

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G  VTRE+YIND G Q++    S+    + A     +  P+  Y G Y+  + +
Sbjct: 121 RVLEAGGATVTREFYINDRGNQMDLFGASI----EAAALGKPT--PDDGYHGGYIADLAR 174

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  +    +L  P+E+ L   ++      +   ++ L   N   D++ SE   H  D  
Sbjct: 175 QIVAE-DPAILELPDEERLVAFREQGYALQLAQQQEQLARFNTVFDVWFSERSLH--DSD 231

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +D L  QG++YE                D   L  R+T  GDD DR L++S+G  
Sbjct: 232 DVAAGLDKLRAQGHLYE----------------DDGALWMRTTDFGDDKDRVLIRSNGEL 275

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AVSEKKAQINVLLCELVR 390
           TYFA+D AY+  K ERGFD  IY++G+DH GYV RL+A+AA A  + +  I VL+ +LV+
Sbjct: 276 TYFASDTAYYVNKRERGFDRCIYLLGADHHGYVGRLKAMAACAGDDPERNIEVLIGQLVK 335

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + R G  +++SKRAG+ ++L  ++DE+G+D++R+ +        L  D  ++ +QS ENP
Sbjct: 336 IVRGGEEVRLSKRAGEIVSLEELIDEIGTDALRYSLARYPADSPLTLDIAEITKQSSENP 395

Query: 451 VFYVQYAYARCRSIFRQAKDI---FPDLDFD--LFPRNVIPQESEFDTSELQLIVHLAEY 505
           VFYVQYA+AR  SI R A+D+   +   DFD  L      P+E E       L+  LAE+
Sbjct: 396 VFYVQYAHARIASILRNAEDLGIAWSTGDFDPALLSH---PKEGE-------LLRALAEF 445

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           PRV+  A   +EP+++A YL D+A V+H  + + R  P +   QA +  L   RL LV A
Sbjct: 446 PRVVAAAAELREPHRVARYLEDMAGVYHRFYDNCRVLP-MGDEQAGD--LHRARLVLVAA 502

Query: 566 VASIINSGLNIIGVESPNEM 585
             +++ +GL+++GV +P  M
Sbjct: 503 TRTVLANGLDLVGVSAPERM 522


>gi|73748954|ref|YP_308193.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|109894987|sp|Q3ZYF0|SYR_DEHSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|73660670|emb|CAI83277.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 556

 Score =  339 bits (869), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 316/555 (56%), Gaps = 34/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IE P+   +G  +T+  + L++  G  P+ +A+++ + I+    +  V +A  GFIN 
Sbjct: 35  ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAQILASYIETGSGISKVSVAPPGFINF 94

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             S  +L  ++ +I+     YG   +G G++V IEFVSANPTGP+H+GH R AV+G TL+
Sbjct: 95  TFSKEWLCSLVKTILTEAGSYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY V  E+YINDAG+QI+    ++F RYQQAL   D+ +P+  Y G Y+  +  
Sbjct: 155 NILKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAA 213

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  KY  + L  P +     + +  +  M+ +I DDLKAL +  DI+ SE   + G   
Sbjct: 214 EMVTKYGDKYLQMPADIAQNDLGEIGMARMLCLISDDLKALKVDFDIWFSERSLYSG--G 271

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +  +D L+   Y+ E      +   T           F ST++GD  D  +++SDG+ 
Sbjct: 272 QYKTAMDILSGNNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFA+D+AY   K+ ER FD +I + G+DH G+V R++A+ +A+     ++  LL +++ 
Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMVSALGINPERLTTLLFQMIT 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  +++SKR G+ I+LR V++EVG+D+ RF  L R     +DFD    K++S ENP
Sbjct: 376 LKRGGELVRLSKRTGEIISLREVIEEVGADACRFFFLARSTESQMDFDLELAKKESAENP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI   A +    LD+     +    +   + +EL+LI  +AE P ++E
Sbjct: 436 VYYVQYAHARICSILHLAAE--KQLDY-----STGDTDLLGEEAELELIRKMAELPEIVE 488

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +   EP+ L +Y  +LA+ FH  +   R       V ++N +LT  RL+LV A   ++
Sbjct: 489 TVSRTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNAELTCARLKLVDASRIVL 541

Query: 571 NSGLNIIGVESPNEM 585
              L+++G+ SP  M
Sbjct: 542 ARTLHLMGMTSPESM 556


>gi|329723123|gb|EGG59655.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 553

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  I+      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEASIRKANLTEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G  +G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M+ ++ DL  
Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYSDEERLKTFRQLGVDYEMEKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I++ +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    ++  D DF     +    
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553


>gi|27467298|ref|NP_763935.1| arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251810035|ref|ZP_04824508.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282874930|ref|ZP_06283805.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|38258364|sp|Q8CTN9|SYR_STAES RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|27314841|gb|AAO03977.1|AE016745_76 arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251806379|gb|EES59036.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296258|gb|EFA88777.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 553

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  I+      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEASIRKANLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G  +G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M+ ++ DL  
Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYSDEERLKTFRQLGVDYEMEKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I++ +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    ++  D DF     +    
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553


>gi|147669721|ref|YP_001214539.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189083531|sp|A5FQ65|SYR_DEHSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146270669|gb|ABQ17661.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 556

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 316/555 (56%), Gaps = 34/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IE P+   +G  +T+  + L++  G  P+ +A+++ + I+    +  V +A  GFIN 
Sbjct: 35  ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAQILASYIETGSGISKVSVAPPGFINF 94

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             S  +L  ++ +I+     YG   +G G++V IEFVSANPTGP+H+GH R AV+G TL+
Sbjct: 95  TFSKEWLCSLVKTILTEAGSYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY V  E+YINDAG+QI+    ++F RYQQAL   D+ +P+  Y G Y+  +  
Sbjct: 155 NILKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAA 213

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  KY  + L  P +     + +  +  M+ +I DDLKAL +  DI+ SE   + G   
Sbjct: 214 EMVTKYGDKYLQMPADIAQNDLGEIGMARMLCLISDDLKALKVDFDIWFSERSLYSG--G 271

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +  +D L+   Y+ E      +   T           F ST++GD  D  +++SDG+ 
Sbjct: 272 QYKTAMDILSGNNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFA+D+AY   K+ ER FD +I + G+DH G+V R++A+ +A+     ++  LL +++ 
Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMVSALGINPERLTTLLFQMIT 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  +++SKR G+ I+LR V++EVG+D+ RF  L R     +DFD    K++S ENP
Sbjct: 376 LKRGGELVRLSKRTGEIISLREVIEEVGADACRFFFLARSTESQMDFDLELAKKESAENP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI   A++    LD+     +        + +EL+LI  +AE P ++E
Sbjct: 436 VYYVQYAHARICSILHLAEE--KQLDY-----STGDTALLGEEAELELIRKMAELPEIVE 488

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +   EP+ L +Y  +LA+ FH  +   R       V ++N +LT  RL+LV A   ++
Sbjct: 489 TVSRTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNAELTCARLKLVDASRIVL 541

Query: 571 NSGLNIIGVESPNEM 585
              L+++G+ SP  M
Sbjct: 542 ARTLHLMGMTSPESM 556


>gi|290967899|ref|ZP_06559449.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782038|gb|EFD94616.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 554

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 208/556 (37%), Positives = 307/556 (55%), Gaps = 35/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  +TN AM  +R     P  IAE IV  +K  P +D   +AG GFIN+
Sbjct: 32  IVLEIPPQKEFGDFATNIAMQSARTAHCAPRHIAESIVEELKA-PWLDKAEVAGAGFINI 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L      ++L  I+     YG         V +EFVSANPTGP+HVGH R A  G +L 
Sbjct: 91  FLDSRVFYQVLQHILTVQEAYGTCAERPEDTVQVEFVSANPTGPLHVGHGRGAAYGSSLV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+  +GY+V  EYYINDAG Q++ LA SV  RY + L+   +++PE  Y G  +    K
Sbjct: 151 NLLRMAGYKVEAEYYINDAGKQMDNLAASVNARYLE-LFGRKAEIPENGYHGQDIIDTAK 209

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +A +     L   E + L I KD + +  +K ++ DL   ++Q+D + SE   H   P 
Sbjct: 210 AIAAQDGDRYLQVSEAERLAIFKDRAYEEKLKALQKDLARFHVQYDHWFSERTLH---PQ 266

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            IR   D L  +G VYE                    L  +ST  GDD DR +++ +G  
Sbjct: 267 GIRQACDALRERGKVYE----------------KDGALWLQSTAYGDDKDRVVIRENGDP 310

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY AAD+AY K KY+R F  MI + G+DH GYV R+ A  AA+     ++ VLL ++V L
Sbjct: 311 TYLAADIAYHKNKYDRHFKTMINIWGADHHGYVARVRAAMAALGYDTKRLEVLLLQMVSL 370

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +RDG P+KMSKR G  ITL  +++EVG+D+ R+  + R     LDFD       S ENPV
Sbjct: 371 FRDGKPVKMSKRTGQAITLNELIEEVGTDAARYFFIMRSLDTQLDFDLDLAMSHSNENPV 430

Query: 452 FYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           +Y+QYA+AR  SI+RQA++    L   ++    +++ +E     +EL LI  +A +P  I
Sbjct: 431 YYIQYAHARIYSIYRQAEEAGIALPQRWEAVQWDLLQEE-----AELALIKKMAAFPEEI 485

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A  A+ P+++A ++Y+ A +FH  ++H       R +Q  +R+L + RL LV AV   
Sbjct: 486 QRAAAARAPHRIAHFVYETAGLFHAFYNH------CRIIQ-EDRELAIARLGLVTAVRFT 538

Query: 570 INSGLNIIGVESPNEM 585
           I + L ++G+ +P +M
Sbjct: 539 IANSLAVLGISAPQQM 554


>gi|82703571|ref|YP_413137.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411636|gb|ABB75745.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 598

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 206/610 (33%), Positives = 321/610 (52%), Gaps = 66/610 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S   + L+    +  +    LD I   RPR  +HG  S N AM L++PL   P  IA
Sbjct: 25  DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 83

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +       P ++ V IAG GFINL+L+ S  ++    ++ SG ++G + +G G K+ +
Sbjct: 84  QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 143

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA+++A +GY VTREYYINDAG Q++ LALS + RY
Sbjct: 144 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 203

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226
            + L    S  P   Y G Y++ + + +   ++   ++ PE                   
Sbjct: 204 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 262

Query: 227 -----EKWL----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                +K L      + ++ +   +   R+DL    +  DI+ SE      D   +   +
Sbjct: 263 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 320

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L    Y+Y+                D  +  FRS+  GD+ DR + + +G +TYFA+D
Sbjct: 321 HLLEEGNYLYQ---------------QDGAKW-FRSSHFGDEKDRVVQRENGQFTYFASD 364

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K+ RGFD +I + G+DH GY+ R++    A++    ++ + L +   LYRDG  
Sbjct: 365 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 424

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           + MS RAG+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+YVQYA
Sbjct: 425 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 484

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515
           +AR  S+  Q  +          P  ++  ++   T  +EL L+  L +YP  +E A   
Sbjct: 485 HARVCSVLEQWGED---------PGMLVTADTSALTGAAELSLLQKLIDYPETVEAAARE 535

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ +AFYL +LA  FH +++        RF+      + + RL LV AV  ++N+GL 
Sbjct: 536 FSPHLIAFYLKELAGEFHSYYN------STRFL-VPEMTVRLARLALVAAVRQVLNNGLK 588

Query: 576 IIGVESPNEM 585
           ++GV +P +M
Sbjct: 589 LLGVSAPAKM 598


>gi|109895009|sp|Q2Y676|SYR_NITMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 581

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 206/610 (33%), Positives = 321/610 (52%), Gaps = 66/610 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S   + L+    +  +    LD I   RPR  +HG  S N AM L++PL   P  IA
Sbjct: 8   DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +       P ++ V IAG GFINL+L+ S  ++    ++ SG ++G + +G G K+ +
Sbjct: 67  QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA+++A +GY VTREYYINDAG Q++ LALS + RY
Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226
            + L    S  P   Y G Y++ + + +   ++   ++ PE                   
Sbjct: 187 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 245

Query: 227 -----EKWL----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                +K L      + ++ +   +   R+DL    +  DI+ SE      D   +   +
Sbjct: 246 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 303

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L    Y+Y+                D  +  FRS+  GD+ DR + + +G +TYFA+D
Sbjct: 304 HLLEEGNYLYQ---------------QDGAKW-FRSSHFGDEKDRVVQRENGQFTYFASD 347

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K+ RGFD +I + G+DH GY+ R++    A++    ++ + L +   LYRDG  
Sbjct: 348 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 407

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           + MS RAG+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+YVQYA
Sbjct: 408 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 467

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515
           +AR  S+  Q  +          P  ++  ++   T  +EL L+  L +YP  +E A   
Sbjct: 468 HARVCSVLEQWGED---------PGMLVTADTSALTGAAELSLLQKLIDYPETVEAAARE 518

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ +AFYL +LA  FH +++        RF+      + + RL LV AV  ++N+GL 
Sbjct: 519 FSPHLIAFYLKELAGEFHSYYN------STRFL-VPEMTVRLARLALVAAVRQVLNNGLK 571

Query: 576 IIGVESPNEM 585
           ++GV +P +M
Sbjct: 572 LLGVSAPAKM 581


>gi|220933450|ref|YP_002512349.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782990|sp|B8GU79|SYR_THISH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219994760|gb|ACL71362.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 586

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 315/591 (53%), Gaps = 71/591 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + + R +D AHG  +TN A+ L++P    P  +AE IVAR+     V    IAG GFINL
Sbjct: 30  VQVTRTKDKAHGDFATNVALQLAKPARKKPRDVAEAIVARLPASGLVARTEIAGPGFINL 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L       ++++I   G  YGR+ +G G KV +EFVSANPTGP+HVGH R A  G  +A
Sbjct: 90  FLGEQAKLSVIATIREQGERYGRSQLGAGKKVQVEFVSANPTGPLHVGHGRGAAYGAAVA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG- 210
            L+   G++V REYY+NDAG Q++ L  SV+ RY + L   +   P   Y G Y+  +  
Sbjct: 150 DLLEAVGFDVHREYYVNDAGRQMDILGTSVWLRYLE-LTGVELPFPTNAYRGDYVYDIAA 208

Query: 211 ---KELADKYSSE----LLNFP--------EEKWLP----------------IVKDYSVQ 239
              +E  D Y  E    L   P        +E+++                  V +  + 
Sbjct: 209 TLHREHGDHYKREAAEILDGLPPDEPDGGDKEEYIDAMIARAKELLGDNHYRFVFELGLN 268

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            ++  IRDDL    + +D + SE      D   +   I+ L   G++YE           
Sbjct: 269 VILDDIRDDLAEFGVTYDTWYSERSL--TDKGAVNLAIERLREAGHLYE----------- 315

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L FRST  GD+ DR + + +G  TYFA+D+AY   K ERG+D +I V G+D
Sbjct: 316 -----KDGALWFRSTDFGDEKDRVVQRDNGQTTYFASDIAYHMDKMERGYDRVIDVWGAD 370

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++A   A+ E + +++VLL +   LYR G  ++MS R+G F+TLR + +EVG 
Sbjct: 371 HHGYVPRVKAALKALGEDETRLDVLLVQFAILYRGGERVQMSTRSGSFVTLRELREEVGK 430

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDF 477
           D+ RF  + R+  + LDFD    K QS +NPV+Y+QYA+AR  S+ RQ  AK +  D   
Sbjct: 431 DAARFFYVMRRCEQHLDFDLDLAKSQSADNPVYYIQYAHARVCSVLRQMEAKGLKHDPSH 490

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                +++ +     + E +++  LA +P VIE A + +EP+++A YL +LA+ FH +++
Sbjct: 491 GEAKLSLLTE-----SHEQEILATLARFPEVIEAAALVEEPHQIANYLRELANDFHTYYN 545

Query: 538 HGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   + P +R            RL L+ AV  +I +GL ++GV +P EM
Sbjct: 546 AHQFLVDEPAIRDA----------RLSLILAVRQVIANGLGLLGVSAPQEM 586


>gi|206901295|ref|YP_002251195.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740398|gb|ACI19456.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 550

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 202/556 (36%), Positives = 312/556 (56%), Gaps = 36/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I+IE P+   +G  +T  A+ +++     P  +AE I+  ++  P +    IAG GFIN 
Sbjct: 29  IIIETPKQKEYGDYATAVALQIAQKNKKPPRIVAEKILENLEKSPFIRKAEIAGPGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+   L + L  ++   ++   ++  K  K+ +EF S NPTGPMH+ H R   +GD+LA
Sbjct: 89  FLNDEALWETLR-LIRKDLDSFVSIPPKKKKIQLEFGSINPTGPMHIAHARGVTIGDSLA 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L    G+ V +E+YINDAG QI+ L  S++ RY Q L   D  +P+  Y G YL  + K
Sbjct: 148 NLFRRIGWNVEKEFYINDAGNQIDLLGESLYARYMQ-LLGYDHPVPDEGYHGNYLIELAK 206

Query: 212 ELADKYSS-ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           EL ++    E +N  E+K     K+Y++  M++ I+  L    +++D++ SE   H    
Sbjct: 207 ELLNQKDQIEKMNETEKK--KFFKEYALSKMLEDIKTTLLDFGVEYDVWFSERTLHEN-- 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +++++D L + GY YE                    + F ST  GD+ DR L+KSDG 
Sbjct: 263 GKVKEVLDILVKNGYAYE----------------KDGAIWFLSTKFGDEKDRVLVKSDGK 306

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYF AD+AY   K +RGFD +I V G+DH  +V RL+    A+   K  + ++L ++VR
Sbjct: 307 PTYFLADIAYHLNKIQRGFDWIIDVWGADHHSHVTRLKGAIQALGYPKDILEIILVQMVR 366

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +    IKMSKR GDF+TL+ V +EVG D +RF  L R     LDFD    K+QS ENP
Sbjct: 367 LMKGNEEIKMSKRTGDFVTLKEVQEEVGKDPIRFFFLLRSPESQLDFDIELAKKQSVENP 426

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V+YVQYA+ARC SI + A+    +L D D    +++ +E E D     LI++L  YP  +
Sbjct: 427 VYYVQYAHARCCSILKNAEAKGYNLADLDQANLSLLKEEKEKD-----LILNLLRYPEKL 481

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++ T   E ++L FYL +L+++FHG++   +       V   +R LT+ RL L+  +  I
Sbjct: 482 DDITRTLEIHQLPFYLLNLSTLFHGYYDSHK-------VITEDRDLTLARLVLIDCIRII 534

Query: 570 INSGLNIIGVESPNEM 585
           I   L+I+GV +P +M
Sbjct: 535 IKDALSILGVSAPEKM 550


>gi|302038582|ref|YP_003798904.1| arginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606646|emb|CBK42979.1| Arginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 584

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 206/607 (33%), Positives = 320/607 (52%), Gaps = 62/607 (10%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           S  L   L+    +  ++ + +  I +E P+    G +S   AM LS      P  IA++
Sbjct: 11  SQALVGALRSAQQRGMLKLEQMPTINLEAPKRPEWGDVSCTVAMSLSASERRPPFEIAQI 70

Query: 68  IVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IV  I+     D++F    IA  GF+NL +       +L  I   G  YG +L+G+G +V
Sbjct: 71  IVDHIE---QRDALFSRAEIARPGFLNLTVKRELWMDVLREIEAQGERYGHSLVGRGRRV 127

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+VSANPTGP+HVGH R A VG  L  L+  +G++V  EYYINDAG Q+  L LSV  
Sbjct: 128 LVEYVSANPTGPLHVGHGRGAAVGQALVRLLRATGHDVVSEYYINDAGRQMKLLGLSVLA 187

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY++A        PE  Y G Y++ V + +  +    LL+ P        +D++ + ++ 
Sbjct: 188 RYREAC-GQPVSFPEDGYHGGYIRTVAEHVKAEQGVVLLSLPAADAEQRSRDFAYRELLA 246

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +IR DL+   I  + + SE          +  ++  L  +  ++               D
Sbjct: 247 LIRQDLETFGIAFESWFSEASLL--SSGAVEQVLSELRARDLLF---------------D 289

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +  Q  FRS+  GD+ DR + K +G YTY A+D+AY + K  RGFD ++ V G+DH GY
Sbjct: 290 QEGAQW-FRSSAFGDEKDRVVRKQEGDYTYLASDIAYHRDKLRRGFDLLVDVWGADHHGY 348

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + R++AV  A    K ++ V+L ++V L R G  ++MSKR+G+FITLR V+DEVG+D+ +
Sbjct: 349 IPRMQAVVQAYGYPKERLRVVLVQMVNLLRGGQKVEMSKRSGEFITLREVMDEVGADAAK 408

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  L R +S  LDFD    K+QS+ENPV+YVQY +AR  S+ R A             R 
Sbjct: 409 FFFLMRDSSTHLDFDLELAKQQSQENPVYYVQYVHARIASLRRVAAS-----------RG 457

Query: 484 V---IPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +   +P +++     D  EL LI  L+ +P V++ + +  EP+++A+YL +LA + H  +
Sbjct: 458 IACPLPSQADLNVLEDPDELALIRKLSAFPVVLQASAVELEPHRMAYYLRELAGMVHPFY 517

Query: 537 SHGR------------------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +  R                    P  R  +A    LT  RL L+ AV  ++ +GLN++G
Sbjct: 518 NKHRILPPAPDSEAVTAASTEQVAPSARTAEAMTPGLTGARLALMWAVQQVVRNGLNVLG 577

Query: 579 VESPNEM 585
           V +P +M
Sbjct: 578 VSAPEQM 584


>gi|327399125|ref|YP_004339994.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181754|gb|AEA33935.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 543

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 206/556 (37%), Positives = 309/556 (55%), Gaps = 38/556 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDV-DSVFIAGKGFIN 90
            +E P++   G  STN AMI++  L  +P  IAE  V   K   PD+ + + IAG GF+N
Sbjct: 23  TVEYPKEEKFGDYSTNMAMIMASKLKKNPKAIAEEFVEFAKQQKPDLFEKIEIAGPGFVN 82

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            Y++ +   + +  I  +   Y +  I    KV +EFVSANPTGP+HVGH R A +GD++
Sbjct: 83  FYINKNAFAEEIKRISENVNLYLKPKIDSTKKVQVEFVSANPTGPLHVGHGRGAAIGDSI 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A +++F GYEV +EYYINDAG Q++ L LS F RY+Q L   +  LPE  Y G YL  V 
Sbjct: 143 ARILSFCGYEVEKEYYINDAGLQMHLLGLSTFIRYKQ-LLGIEETLPEDGYKGEYLIEVA 201

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+L  +Y   LLN  E + + I    + + ++K I + LK   ++ D   +E   +  D 
Sbjct: 202 KKLIVEYGETLLNKKESEAVEICMQKAAKDILKDIMETLKDFRVEFDKVFNEKKLY--DS 259

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +   +  L  +  +YE                    L F+ST  GDD DR L +S+G 
Sbjct: 260 NEVEQSLSLLKEKNAIYE----------------KDGALWFKSTGFGDDKDRVLKRSNGV 303

Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +TYFA+D+AY + K+ +RGF  +I V GSDH GYVKR++A   A+     ++ V+L ++V
Sbjct: 304 FTYFASDVAYHRNKFLKRGFSEVIDVWGSDHHGYVKRVKAAIQAMGIDPNRLKVVLVQIV 363

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R+G  + MS R  +F+ L+ VV EVG D+ RFM + R     LDFD    K+QS EN
Sbjct: 364 NLLRNGQKVSMSTRRAEFVELKDVVKEVGVDAARFMFVSRSVDSHLDFDLELAKKQSSEN 423

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  SI  Q   +  ++D +  P  +  +E      E++LI  + ++  ++
Sbjct: 424 PVYYVQYAHARINSILEQ---LNSEIDLNADPSCLKEKE------EIELIKSVIKFKELL 474

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A +  EPY +   L ++A   H  ++  R       V  +N +L   R+ LV  V  I
Sbjct: 475 EKAFLETEPYFIVKGLLEVAEKLHRFYNKHR-------VIIDNEELKKARVLLVWVVKEI 527

Query: 570 INSGLNIIGVESPNEM 585
           +  GL++IGVE+ N+M
Sbjct: 528 LKIGLSLIGVEAKNKM 543


>gi|295111752|emb|CBL28502.1| arginyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 572

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/558 (35%), Positives = 304/558 (54%), Gaps = 33/558 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINL 91
           +ERPR    G  ++N AM L+R   + P  IA  I   ++      +D V +AG GFINL
Sbjct: 42  LERPRRADQGDRASNVAMQLARAFSMPPRDIAARIAGSLQEGCQDLLDRVEVAGPGFINL 101

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LS  +  +  S ++  G  YG   +G+G +V +EFVSANPTGP+H+GH R A VGD +A
Sbjct: 102 FLSHRWFAEAASQVLQQGERYGAVDLGQGRRVQVEFVSANPTGPLHIGHGRGAAVGDAVA 161

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHVG 210
            +++F+G+ V REYY+NDAG QI TL  S   RY +    ++ + LPE  Y G YL  + 
Sbjct: 162 RILSFTGWNVEREYYLNDAGLQIETLGRSTQARYFEVCGRSELAPLPEDGYKGDYLLDLA 221

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + +  +     L  P  + LP  + Y+   +++ IR+DL+   +  D + SE   +  D 
Sbjct: 222 ERIRKEEGDRFLATPLAESLPWFERYAADHILEGIREDLERFGVLFDSWFSEASLYERDL 281

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +++L ++GY +E                    L F+ST   DD DR L++S+G 
Sbjct: 282 --VSHAMEDLKKRGYAFE----------------SNGALWFKSTAFADDKDRVLIRSNGV 323

Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            TYFA+D+AY   K+  RGFD +I V G+DH GYV R++A   A+         LL +LV
Sbjct: 324 PTYFASDVAYHHDKFVRRGFDRVIDVWGADHHGYVPRMKAAVEAMGRAPDDFKALLIQLV 383

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG  + MS RAG+F+TLR V+DEVG D+ RF  L R++   LDFD    K+QS +N
Sbjct: 384 ALKRDGKIVSMSTRAGEFVTLRSVLDEVGVDATRFFFLMRRSDSQLDFDLDLAKKQSSDN 443

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVH-LAEYPR 507
           PV+Y+QYA+AR  S+ R+ +    D+      R+  P  +  FD  E + +   LA +P 
Sbjct: 444 PVYYLQYAHARISSLLREWEGRGGDV--AALRRDGTPLPDLLFDNREARALAETLATFPV 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A+    P+ +  Y  +LA  FH  ++  R       +   + ++   RL+L  AV 
Sbjct: 502 EMAGASADLAPHVVTAYALNLAGAFHSFYNTNR-------ILGESTEVERGRLRLAEAVR 554

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ + L ++GV +P  M
Sbjct: 555 IVLATCLGLLGVSAPERM 572


>gi|284032952|ref|YP_003382883.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812245|gb|ADB34084.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 552

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 203/571 (35%), Positives = 313/571 (54%), Gaps = 42/571 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           D  I V+  +   + +ERP++  HG  +TN AM L +  GL+P   AEL+ A++  D  +
Sbjct: 20  DGTITVDGGLPRELKVERPKNPEHGDYATNVAMQLGKRSGLNPRRFAELLAAKLDSDDAI 79

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            +V IAG GFINL ++     KI  +IV +G  YG +   +G  +N+EF+SANPTGP+H+
Sbjct: 80  TAVEIAGPGFINLRVAADAQGKIAQAIVDAGPAYGSSDSLQGQAINLEFISANPTGPLHL 139

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A VGD LA ++A +G  VTRE+Y+ND GAQ++    S+    Q         +PE
Sbjct: 140 GHTRWAAVGDALARVLAKAGAVVTREFYVNDRGAQMDKFGASLKAAAQ------GQPIPE 193

Query: 199 GYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             Y G Y+     ELA++  +E   +   P+ +     ++   +  +K  +  L+    +
Sbjct: 194 DGYHGAYI----LELAERIVAEVPGITELPDAEQTVAFREAGYERQLKEQQAQLEHFRTK 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++ SE   H  D   +   I+ L  QG++Y+                D   L  R+T 
Sbjct: 250 FDVWYSERSLHEQD--GVGHAIEKLRGQGHLYD----------------DDGALWMRTTD 291

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AV 374
             DD DR L++S+G  TYFA+D AY+  K ERGF+  IY++G+DH GYV RL+A+AA A 
Sbjct: 292 FTDDKDRVLIRSNGEPTYFASDAAYYVNKRERGFEVAIYLLGADHHGYVNRLKAIAACAG 351

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            + +  I +L+ +LV++ + G  +K+SKRAG  +TL  +V+E G D +R+ +        
Sbjct: 352 DDPEHNIEILIGQLVKILKGGEEMKLSKRAGTIVTLAELVEEGGVDPLRYTLCRYPVDSP 411

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L  D  ++  Q  ENPV+YVQYA+AR  SI R A D+   +  D F   ++  + E D  
Sbjct: 412 LTLDIEEMTRQVSENPVYYVQYAHARLASILRNADDL--GIKLDEFDPGLLSHDREGD-- 467

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L+  LAE+PR++  A   +EP+++A YL D AS FH  +   R  PR          
Sbjct: 468 ---LLRALAEFPRIVATAAELREPHRIARYLEDTASAFHKFYDSCRVLPR---GDEEVEP 521

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL LV A  +++ +GL+++GV +P  M
Sbjct: 522 VHKARLTLVGATRTVLANGLDLLGVSAPERM 552


>gi|325982011|ref|YP_004294413.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531530|gb|ADZ26251.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 586

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 202/622 (32%), Positives = 326/622 (52%), Gaps = 81/622 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F +F +     +K+    I   +     + + R +  +HG  S N AM L++PL  +P  
Sbjct: 6   FPNFKTHFIKLIKKASSAITSLETAAISVELTRTKQASHGDYSCNLAMQLAKPLHKNPRE 65

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+L++  +   P ++ V +AG GFINLYL  S  ++ L  I+ S   +G +  G+G K+
Sbjct: 66  IAQLLINALPPSPYLEKVEVAGAGFINLYLKNSAKQQFLHLILRSKNTFGNSTFGQGRKI 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +G +L++++A +G++V+RE+Y+NDAG Q++ L LS + 
Sbjct: 126 QVEFVSANPTGPLHVGHGRGAAIGASLSNILAAAGFDVSREFYVNDAGRQMDILTLSTWL 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----------------- 226
           RY + L +     P   Y G Y++ + + +   ++   ++ PE                 
Sbjct: 186 RYLE-LNHIHVPFPHNAYQGEYVRTMAQLIFQAHAQRYVHQPELLLDSLPEAVRATAVNT 244

Query: 227 ----EKWLPIVK-----DYS------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +K +   K     DY+      +   +   R+DL    ++ D + SE   +  D  
Sbjct: 245 DEQLDKLIANTKKILGEDYTYIHNLVLTEQLGDCRNDLMEFGVEFDTWFSEQSLY--DNG 302

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   ID LA++ ++Y+                    + FRST  GD+ DR + + +G +
Sbjct: 303 LVAHTIDLLAKKHHLYQ----------------QDGAIWFRSTDFGDEKDRVVQRENGQF 346

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA+D+AY   K+ERGFD +I + G+DH GY+ R++    A+     ++ + L +   L
Sbjct: 347 TYFASDIAYHLNKFERGFDQVINIWGADHHGYIPRVKGALQALELDAERLQIALVQFAVL 406

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           YRDG    MS R+G+F+TLR +  EVG D+ RF  + RK+ + LDFD    K QS ENPV
Sbjct: 407 YRDGKKAPMSTRSGEFVTLRELRQEVGKDAARFFYVMRKSDQHLDFDMDLAKSQSNENPV 466

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPR 507
           +YVQYA+AR  S+  Q +    DL           QE   D     +EL L+  L ++P 
Sbjct: 467 YYVQYAHARVCSVLTQWEGNIDDL-----------QEVNVDALSSPAELALLQKLIDFPD 515

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLV 563
            IE A     P+ +AFYL +LAS FH +++  R    E P           L   RL L+
Sbjct: 516 TIEIAAKESSPHLIAFYLRELASEFHSYYNSTRFLVPEIP-----------LQHARLALI 564

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            ++  ++++GL ++GV +P++M
Sbjct: 565 ASIRQVLHNGLTLLGVSAPDKM 586


>gi|260881528|ref|ZP_05404644.2| arginine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848689|gb|EEX68696.1| arginine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 546

 Score =  336 bits (862), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 204/557 (36%), Positives = 296/557 (53%), Gaps = 34/557 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L ++++E P     G  +TN AM  +R    +P  IAE +  RI+ D  +D   IAG GF
Sbjct: 24  LPQVILEVPPQKEFGDFATNFAMQSARVFHRNPRQIAEELAKRIEGDW-LDHTQIAGPGF 82

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N YL  + L      I+ +G  +G        K+ +E+VSANPTG +HVGH R A  G 
Sbjct: 83  LNFYLKGNVLYDSFQKILEAGEAFGNLPKLDHPKIQVEYVSANPTGLLHVGHGRGAAAGS 142

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L +L+  +GY V  EYYINDAG Q+N LA SV  RY + L   +   PE  Y G  +  
Sbjct: 143 ALVNLLRAAGYPVESEYYINDAGNQMNNLARSVNARYLE-LLGKEVTFPEDGYHGQDIID 201

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
             + + D+   + L   EE+ L I KD +    + I+++DL+  ++  D + SE   H  
Sbjct: 202 TAQRIIDRDGDKYLALSEEERLAIFKDLAYHEKLAILKEDLERFHVTFDNWFSERTLH-- 259

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            P  +R +++ L  +G +YE                    L  +ST  GDD DR +++ +
Sbjct: 260 -PDAVRKVVEILKEKGDIYE----------------KEGALWLKSTAYGDDKDRVVIRDN 302

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TY AAD+AY   KYERGFD +I + G+DH GYV R++A   A+     ++ VLL ++
Sbjct: 303 GVPTYLAADIAYHHNKYERGFDRLINIWGADHHGYVCRVKAAMQALGHDPEKLTVLLLQM 362

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V LYR G  +KMSKR G  +TL  +++EVG+D+ R+  L R     LDFD    K++S +
Sbjct: 363 VSLYRGGELVKMSKRTGQSVTLNELMEEVGTDAARYFFLMRSLDSQLDFDLDLAKKKSND 422

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+Y+QYA+AR  SIFRQA++    L     P      E   D SE+ LI  + EYP  
Sbjct: 423 NPVYYIQYAHARICSIFRQAEET--KLALGEAPH----LELLTDESEVALIKKIEEYPEE 476

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A     P ++A Y YDLA++FH  ++  R       +   +  L   RL LV   A 
Sbjct: 477 VAKAAADYAPQRIARYSYDLAALFHSFYNKCR-------IMGVDHDLAEARLALVTVTAH 529

Query: 569 IINSGLNIIGVESPNEM 585
           +I   L I+GV +P  M
Sbjct: 530 VIRHSLGILGVSAPEHM 546


>gi|117927836|ref|YP_872387.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648299|gb|ABK52401.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 562

 Score =  336 bits (862), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 196/582 (33%), Positives = 314/582 (53%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  ++  ++      ++   +   +++ERP+    G  +TN A+ L++  G  P  +
Sbjct: 16  ADLADAIRRAIRAAVDADQLRVDVPAEVLVERPKRKEFGDYATNVALQLAKSAGRPPRDV 75

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A ++  ++   P + +V +AG GF+N+ L+      I   IV +G  YG +   +G ++N
Sbjct: 76  AAILAEQLAAQPGIAAVDVAGPGFLNIRLAAGAQGDIARQIVEAGPRYGTSTTLRGQRIN 135

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+GH R A VGD LA ++  +G EVTRE+YIND GAQ+     S+   
Sbjct: 136 VEFVSANPTGPLHLGHTRWAAVGDALARVLQAAGAEVTREFYINDRGAQMEKFGASL--- 192

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
              A       +P+  Y G Y+  + KE+A ++  E L+ P ++     +D   +  ++ 
Sbjct: 193 ---AAAAVGEPIPDDGYHGRYIHDLAKEIAGEH-PEFLDLPPDERAAAFRDEGYRRQLER 248

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R  L+   +  D++ SE   H  +   +   +D L RQG+VYE                
Sbjct: 249 QRRALEHFRVHFDVWFSERVLH--ESGAVEAALDELRRQGHVYEA--------------- 291

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +  R+T  GDD DR L++S+G  TYFAAD AY+  K  RGFD  +Y++G+DH GYV
Sbjct: 292 -DGAVWLRTTDFGDDRDRVLVRSNGEKTYFAADAAYYLDKRRRGFDTCLYLLGADHHGYV 350

Query: 365 KRLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+A+AA A  + +  + VL+ +LV++ + G  +++SKRAG+ +TL  VVD  G D+VR
Sbjct: 351 ARLKAIAACAGDDPERTLEVLIGQLVKILKGGEEVRLSKRAGEIVTLEDVVDLAGVDAVR 410

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +        L  D   +  Q+ +NPVFYVQY  AR  S+ R A+D+   +D   F   
Sbjct: 411 YSLARYPADSPLTLDVDLITRQTNDNPVFYVQYVAARTASVSRHARDL--GIDRGAFDPT 468

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     L+  LAE+PR++ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 469 LLGHDREID-----LLGALAEFPRIVASAAELREPHRIARYLEELAGTYHRFYDACRILP 523

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      LT  RL L  A   +I +GL ++GVE+P  M
Sbjct: 524 ---VGDEQPTPLTHARLWLNDATRIVIANGLELLGVEAPERM 562


>gi|257056971|ref|YP_003134803.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586843|gb|ACU97976.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 551

 Score =  336 bits (862), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 197/556 (35%), Positives = 298/556 (53%), Gaps = 34/556 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ +ERPR+  HG  +TN A+ +++  GL P   AE +   I   P + S  +AG GF+
Sbjct: 30  EQVTVERPRNPEHGDYATNLALQVAKKAGLQPREFAEALAEVISSAPGIASAEVAGPGFL 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL L+     +I+  ++ +G +YGR     G K+N+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NLRLAADAQGEIVRQVLDAGADYGRGDSLVGQKINLEFVSANPTGPIHLGGTRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  L+A  G EVTREYYINDAGAQI+  A S+    +          PE  Y G Y+  +
Sbjct: 150 LGRLLAAQGAEVTREYYINDAGAQIDRFAESLLAAAE------GRPTPEDGYAGAYITDI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E+  +   E+L+ P+E+     K   V+ M++ I+  L       D++ SE   H   
Sbjct: 204 AAEIL-RREPEVLSLPDEERFATFKRLGVELMLEEIKQSLSDFGTHFDVWFSEKSLHTS- 261

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  I+ +L   G +Y+                       RST  GDD DR ++KSDG
Sbjct: 262 -GELESILADLKESGSLYQ----------------KDGAWWLRSTEHGDDKDRVVIKSDG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y A D+AY + K +RGFD  +Y++G+DH GY+ RL+A AAA+      + VL+ +LV
Sbjct: 305 TLAYIAGDVAYLRNKLDRGFDLCVYMLGADHHGYIARLKAAAAAMGHSPDTVEVLIGQLV 364

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L   G P++MSKRAG  +T+  +V+ VG D+ R+ +        LD D   +++++ EN
Sbjct: 365 NLVSGGKPVRMSKRAGTVVTMEDLVEAVGVDAARYELCRYSVDASLDIDLDLLRKRTNEN 424

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PVFYVQYA+AR  S+ R A ++      +L PR+           E  LI  + E+P V+
Sbjct: 425 PVFYVQYAHARLASLQRNAAEL------NLEPRSDADVSLLTHPREGDLIRTIGEFPSVL 478

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A   +EP+++A YL  LAS +H  +   R  P+          LT  RL L  A   +
Sbjct: 479 RTAAELREPHRVARYLESLASAYHKFYDVARVLPQ---GDEEPTPLTYARLALCEATRQV 535

Query: 570 INSGLNIIGVESPNEM 585
           + +GL+++GV +P  M
Sbjct: 536 LANGLSLLGVSAPERM 551


>gi|319400084|gb|EFV88320.1| arginyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 553

 Score =  336 bits (861), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  I+      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEVSIRKANLAEDIPEIKIEIPKDPKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G  +G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M+ ++ DL  
Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYTDEERLKTFRQLGVDYEMEKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I++ +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    ++  D DF     +    
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553


>gi|111225301|ref|YP_716095.1| arginyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123142636|sp|Q0RD93|SYR_FRAAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|111152833|emb|CAJ64578.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 552

 Score =  335 bits (860), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 204/562 (36%), Positives = 300/562 (53%), Gaps = 54/562 (9%)

Query: 35  ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           ERP+   HG  ++  A+ L++     P  +AE++  R+     + SV IAG GF+N  L+
Sbjct: 34  ERPKTAGHGDYASPVALQLAKAARRKPREVAEVLAGRLATQSGIASVDIAGPGFLNFTLA 93

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
              L +I  ++V +G  YG     +G +VN+EFVSANPTGP+ +   R A VGD LA ++
Sbjct: 94  GDALGEIARTVVRAGESYGHAAKPRGVRVNLEFVSANPTGPVTLASARWAAVGDALARIL 153

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-L 213
             +G+ V  EYY+NDAG QI     SV             ++P   Y G Y+  +    L
Sbjct: 154 TAAGFSVGGEYYVNDAGVQIERFGASVL------AAAAGREIPAEGYHGAYVAEIAAAVL 207

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +   +LL+ PE+  L +  +  +  M+  IR  L+   +  D + SE   H      +
Sbjct: 208 AGR--PDLLDLPEDAALAVTTEEGLALMLTEIRSTLEGFGVHFDRWASERALH--TAGAL 263

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              ID+L  QG+VY               D D   +  R+T  GDD DRPL+KSDG  TY
Sbjct: 264 TKAIDDLRAQGHVY---------------DAD-GAVWLRTTDFGDDKDRPLVKSDGQPTY 307

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLY 392
           F AD AY++ K  RGFD +IY++G+DH GYV RL+A++A   +  A  ++V++ +LV L 
Sbjct: 308 FCADAAYYRDKRGRGFDQLIYLLGADHHGYVARLKAISACFGDDPATNLDVIIGQLVTLS 367

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           R G P+KMSKRAG F+TL  +VD VG D+ R+ ++       LD D   V  Q+ +NPVF
Sbjct: 368 RGGAPVKMSKRAGTFLTLHDLVDAVGVDAARYSLVRSSLDSSLDLDLDLVTRQTSDNPVF 427

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LA 503
           YVQYA+AR  S+ R A+ +             +P  SE  T+++ L+ H         L 
Sbjct: 428 YVQYAHARISSLLRNAEALG------------LPTASE--TADVALLTHPREVDLLRGLG 473

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+PRVIE A   + P+++A YL +LA V+H  +   R  P+          LT  RL LV
Sbjct: 474 EFPRVIEAAASLRGPHRVARYLEELAGVYHRFYDACRVLPQ---GDEEAGPLTGARLLLV 530

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +GL ++GV +P  M
Sbjct: 531 AATRVVLANGLGLLGVSAPERM 552


>gi|329121651|ref|ZP_08250271.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468511|gb|EGF13991.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 554

 Score =  335 bits (860), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 194/549 (35%), Positives = 295/549 (53%), Gaps = 44/549 (8%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G  S+NAAM  +R   + P  IAE++V  I     V    IAG GFIN +L+   +   L
Sbjct: 44  GDYSSNAAMQWARVAHMAPRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKDTVYAEL 102

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I+  G  YG         V +E+VSANPTGP+H+GH R A  G  + +L+  +GY+V 
Sbjct: 103 KKILAKGENYGDLPRNDEEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVL 162

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            EYYINDAG QI+ LALSV  RY Q L   D+ LPE  Y G  +    + + D+  ++ L
Sbjct: 163 SEYYINDAGNQIDNLALSVNARYLQ-LLGKDAQLPENGYHGHDIIETAQSILDRDGTKYL 221

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              EEK + + K+ +++  +  ++ DL   N++ D+++SE  F+   P  + +++D L +
Sbjct: 222 EMDEEKRIEVFKEVALKEKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKK 278

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G +YE                        +T  GDD DR +++S+G  TYF +D+AY K
Sbjct: 279 NGTLYE----------------KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVK 322

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K ERG+  +I + G+DH GY+ R+++   ++       +++L ++V L RDG P+KMSK
Sbjct: 323 NKIERGYHKLIDIWGADHHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSK 382

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G  +TLR ++DEVG D  R+    R     +DFD    K++S ENPV+Y+QYA AR  
Sbjct: 383 RTGQSVTLRELMDEVGVDVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVH 442

Query: 463 SIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           S+F+QAK+       + D+DF +            D SEL LI  +  Y   ++ A   +
Sbjct: 443 SLFKQAKENGVKIPSWEDVDFTVL----------VDESELDLIKKMEVYHGFLKGAAAER 492

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P ++A Y Y+LA++FH  +   R       +     KL   RL L+ AV  ++   L I
Sbjct: 493 APQRIATYAYELAALFHHFYRKCR-------ILGEEEKLMQARLGLIRAVGYVLVHALGI 545

Query: 577 IGVESPNEM 585
           +GV +P EM
Sbjct: 546 LGVSAPEEM 554


>gi|285017188|ref|YP_003374899.1| arginyl-tRNA synthetase (arginine--tRNA ligase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472406|emb|CBA14911.1| probable arginyl-trna synthetase (arginine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 562

 Score =  335 bits (860), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 202/567 (35%), Positives = 310/567 (54%), Gaps = 48/567 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
            V+ERP+   HG  ++NAAM+L++    +P  +A+ +V  +  + D+  V IAG GFIN 
Sbjct: 31  FVVERPKTREHGDFASNAAMLLAKAARTNPRALAQQLVDALPANDDIRKVEIAGPGFINF 90

Query: 92  YLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L P +Y R++L+ ++  G +YGR+L+G G  V +E+VSANPTGP+HVGH R A +GD L
Sbjct: 91  HLGPGAYQREVLT-VLKQGHDYGRSLVGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCL 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A L+  +G+   RE+Y ND G QI  LA SV  R       +  D PE  Y G Y++ V 
Sbjct: 150 ARLLEANGWNARREFYYNDGGGQIENLARSVQAR-AHGKTPDSHDWPEEGYRGDYIQDV- 207

Query: 211 KELADKY-SSELLNF--------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
              AD Y +   +N          +   L  ++ ++V  +      DL A  +  DI+  
Sbjct: 208 ---ADAYMTGATVNLEGHLVKGAKDPNDLEAIRRFAVAYLRNEQNHDLAAFGVDFDIYFL 264

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +R     + + +  L   G+ YE                +   L  +ST  GDD D
Sbjct: 265 ESSLYR--DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKD 306

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDG+YTYF  D+AY   K++RG+   I  +G+DH G + R+ A   A  +   K 
Sbjct: 307 RVMRKSDGTYTYFVPDVAYHLSKWQRGYVRAITELGADHHGSLARVRAGLQAMDLGIPKG 366

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
               +L ++V + R G  +K+SKRAG ++TLR +++E G D+ R+ ++ RK    L FD 
Sbjct: 367 WPEYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLIEEAGRDATRWFLIARKPDSQLTFDI 426

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQL 498
              ++QS +NPVFYVQYA+AR  S+ RQA++   D D    P + + Q +   DT+ L+L
Sbjct: 427 DLARQQSNDNPVFYVQYAHARVCSLLRQAQEKQRDYD----PADGMSQLNRLNDTTSLEL 482

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           ++ L+ YP V+ENA    EP+ +A YL +LA+ FH  W HG        V  ++      
Sbjct: 483 MMELSRYPEVVENAGHVLEPHLIAQYLRELATAFH-TWYHGTP------VLVDDASERNA 535

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           +L L  A   ++ +GLN++GV +P +M
Sbjct: 536 KLALAVAAQQVLANGLNLLGVCAPEKM 562


>gi|330469870|ref|YP_004407613.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812841|gb|AEB47013.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 554

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 193/558 (34%), Positives = 304/558 (54%), Gaps = 35/558 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           ++  +ERPR+  HG  ++  A+ LS+ +G+ P  +A  + A++   P + SV IAG GF+
Sbjct: 30  EQTTVERPRNPDHGDYASTLALQLSKKVGVPPRELAGDLAAKLGSTPGIKSVEIAGPGFL 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++  +IV +G EYGR  +  G K+N+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NIRLDAAAAGQLARTIVTAGEEYGRGDVLAGLKINLEFVSANPTGPVHIGGVRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L+ L+  +G +V  EYY NDAG+QI+  A S+    +          PE  Y G Y+  +
Sbjct: 150 LSRLLRAAGADVGTEYYFNDAGSQIDRFARSLLAAAKG------EPAPEDGYGGAYIAEI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E+  +   E+L+  E+    + +   V+ M   I+  L+   ++ D + +E D H  D
Sbjct: 204 ANEVTAR-RPEVLSLDEDAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDLH--D 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   ++ L  QG+++E                       R+T  GDD DR L KS+G
Sbjct: 261 RGELEHALNRLREQGHIFEA----------------DGATWLRTTDFGDDKDRVLRKSNG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388
            +TYFAAD AY+  K ERGFD ++ ++G+DH GY+ R++A++A   +  AQ + +L+ +L
Sbjct: 305 EWTYFAADCAYYLDKRERGFDRVVIMLGADHHGYIGRMKAMSACFGDDPAQNLEILIGQL 364

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L RDG P++MSKRAG  ITL  +VD +G D+ R+ +    +   +D D       +++
Sbjct: 365 VNLVRDGAPVRMSKRAGTVITLEDLVDAIGVDASRYALARYSSDSPIDIDIELWTRATRD 424

Query: 449 NPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           NPV+YVQY  AR  S+ R A ++     D D F   ++  + E      +L+  LAE+P 
Sbjct: 425 NPVYYVQYVAARTASVGRNAAEVGLTRGDVDAFRPELLDHDKEN-----ELLKALAEFPA 479

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+  A   +EP+++A YL DLA  +H  + + R  PR          L   RL L  A  
Sbjct: 480 VVAAAAELREPHRVARYLEDLAGAYHRFYDNCRILPR---GDEEVTDLHRARLWLNDATR 536

Query: 568 SIINSGLNIIGVESPNEM 585
            +I +GL ++GV +P  M
Sbjct: 537 VVIANGLRLLGVSAPERM 554


>gi|293399769|ref|ZP_06643915.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306169|gb|EFE47412.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 555

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/568 (35%), Positives = 306/568 (53%), Gaps = 42/568 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PD 77
           D ++K+EK     IVIE P+D +HG  STN AM L+R L  +P  IAE +   + ++   
Sbjct: 29  DTEVKIEK-----IVIEIPKDKSHGDYSTNLAMQLTRLLKNNPRVIAEALQQNLDMEAAA 83

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           ++   IAG GF+N  +  + L +I+ +++  G  +G N  G   +VNIE+VSANPTG +H
Sbjct: 84  IEHCEIAGPGFLNFKIKNTSLAQIIKTVLAQGDNFGHNETGNHERVNIEYVSANPTGDLH 143

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH R A  GD++  LM  SGY+VTREYY+NDAG QI  L  S+  RY++ L      LP
Sbjct: 144 LGHARGAAWGDSITRLMKASGYDVTREYYVNDAGNQIVNLGKSLQARYREYL-GLPFVLP 202

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           E  Y G  ++ +  +LA  Y        +E  L   K+  +   +  I+ DL    +  D
Sbjct: 203 EDGYHGEDVRKIAVKLAQTYGQTYAEENDEN-LKFFKEKGIAFELDKIKCDLDNFRVHFD 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           ++ SE      D   +   +D L  +G  YE                +   L F++T  G
Sbjct: 262 VWSSEQKIR--DDGKVEKALDVLHEKGLTYE----------------EEGALWFKTTQFG 303

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           DD DR L K+DGSYTY   D+AY K K +RGFD ++ ++G+DH GY+ RL+A   A+   
Sbjct: 304 DDKDRVLRKTDGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIQALGND 363

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
             ++ V + ++VRL  +G  +KMSKR G+ +T+R + DEVG D+VR+  + R     LDF
Sbjct: 364 PEKLQVDIIQMVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHLDF 423

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D    ++QS +NPV+Y QYA+AR  SI RQA D     ++DL               E+ 
Sbjct: 424 DLGLARKQSNDNPVYYAQYAHARICSILRQAPDFKEATNYDLLTHE----------KEIS 473

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+ ++ E+  V+ +A   + P+K+  Y+  LA  FH  ++        + +   +  L+ 
Sbjct: 474 LMKYINEFTNVVSDAAKTRAPHKVCNYIQKLAQHFHSFYN------ACKVIDPEHEALSA 527

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L+ A    + + L +IGV++  +M
Sbjct: 528 QRLALLKATRITLKNALFLIGVDAIEKM 555


>gi|242241972|ref|ZP_04796417.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234603|gb|EES36915.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 553

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 307/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  I+      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEVSIRKANLAEDIPEIKIEIPKDPKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G  +G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M+ ++ DL  
Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYTDEERLKTFRQLGVDYEMEKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I + +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIENTLSKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    ++  D DF     +    
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553


>gi|332671324|ref|YP_004454332.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332340362|gb|AEE46945.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 560

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 200/560 (35%), Positives = 298/560 (53%), Gaps = 43/560 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR   HG  +TN AM L++  G +P   AE +  R+K    V SV +AG GF+N+ L
Sbjct: 36  LERPRQREHGDWATNVAMQLAKKAGTNPRAFAEELARRLKETSGVASVEVAGPGFLNIRL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  SIV  G EYGRN    G ++N+EFVSANPTGP+H+G  R A VGD+LA +
Sbjct: 96  DAAAAGELARSIVEQGGEYGRNDTLAGVRLNLEFVSANPTGPLHIGGVRWAAVGDSLARV 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212
           +  SG +V REYY ND GAQI+  A S+  R          D PE  Y G Y+  + ++ 
Sbjct: 156 LQASGADVAREYYFNDHGAQIDRFARSLVARALS------EDAPEDGYGGSYITEIAEQV 209

Query: 213 LADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           +AD  ++   +    P ++     +   V+ M   I+  L    +  D++  ED  H  +
Sbjct: 210 VADALAAGEPDPRTLPRDEATEAFRARGVELMFAEIKQSLHDFGVDFDVYFHEDSLH--E 267

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   ++ L   G+V+E                    +  R+T  GDD DR ++KSDG
Sbjct: 268 SGAVEHAVERLRAGGHVFE----------------QDGAVWLRTTDFGDDKDRVVIKSDG 311

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCEL 388
              Y + D+AY+  K ERGFD +I ++G+DH GYV R+ AV AA  +     + +L+ ++
Sbjct: 312 EGAYISGDIAYYLDKRERGFDRVILMLGADHHGYVGRMMAVCAAFGDTPHVNLEILIGQM 371

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L +DG P++MSKRAG  +T+  +VD VG D+ R+ +        +D D   +     E
Sbjct: 372 VNLVKDGEPVRMSKRAGTVLTIDDLVDAVGVDAARYSLARSSADSTIDLDLDLLASAKNE 431

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR  SI R A D     + D F  +++  E     SE  L+  LAE+PR+
Sbjct: 432 NPVFYVQYAHARTASIGRNAVDAGVRKE-DGFDASLLDHE-----SEAVLLGQLAEFPRI 485

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVHA 565
           +  A   +EP+++A YL DLA  FH  W     + + R V   +  +      RL LV A
Sbjct: 486 VAQAAELREPHRVARYLEDLAGTFH-KWY----DAKRRVVPFGDEPVDDGHRTRLWLVDA 540

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P  M
Sbjct: 541 TRQVLANGLGLLGVSAPERM 560


>gi|257092605|ref|YP_003166246.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045129|gb|ACV34317.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 590

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/599 (34%), Positives = 304/599 (50%), Gaps = 82/599 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IERP+  AHG  S N AM L+R L  +P  +AEL+++ +   P V    IAG GFIN 
Sbjct: 29  IHIERPKQAAHGDFSCNLAMQLARSLKRNPRQLAELLLSELPPSPWVSKAEIAGAGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L P+   +++  ++    ++GR+  G   KV +EFVSANPTGP+HVGH R A  G +L 
Sbjct: 89  HLPPTAKIQVVRDVLEQAEDFGRSTSGGRRKVLVEFVSANPTGPLHVGHGRGAAYGGSLC 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209
            L+AF+G++VT EYY+NDAG Q++ LALS + RY +        S  P   Y G Y++ +
Sbjct: 149 KLLAFAGWDVTSEYYVNDAGRQMDILALSTWLRYLELCSGEGTPSLFPPNAYQGDYVRAM 208

Query: 210 GKEL------------------------ADKYSSELLNFPE---------------EKWL 230
             +L                        A++  +E     E               E+W 
Sbjct: 209 ASQLLTAHGERYRRTASDVLAGTPGLPGAERTDAEAAQQREAQLDALIVNAKHLLGEEW- 267

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEG 289
             V D+ +   +   R DL+   +  D++ SE   F  G    +   ++ L + G++Y  
Sbjct: 268 QYVHDFVLTEQLADCRGDLEESGVHFDVWFSEQSLFATG---MVARCVERLEKGGHLY-- 322

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                         +      FRST  GD+ DR + + +G YTYFA+D+AY   KYERGF
Sbjct: 323 --------------VQDGARWFRSTTFGDEKDRVIQRDNGFYTYFASDIAYHLNKYERGF 368

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             +I V G+DH GY+ R++   +A+      + V L +   LYR G    MS R+GDF+T
Sbjct: 369 QRIINVWGADHHGYIPRVKGAVSALGLDPEVLEVALVQFAVLYRSGCKASMSTRSGDFVT 428

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS---IFR 466
           LR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPVFYVQYA+AR RS   ++ 
Sbjct: 429 LRTLRAEVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNDNPVFYVQYAHARVRSLLALWA 488

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
               +    D D       P  S     EL L   L E+P V+E A     P+ +AFYL 
Sbjct: 489 GEPQVLAGADLD-------PLGS---ARELALAARLGEFPEVVEAAAGELAPHLIAFYLR 538

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA+ FH H++  R       +  ++  +   R+ L  AV  +I +G+ I+GV  P  M
Sbjct: 539 DLAAEFHSHYNAER-------ILVDDPAIRDARIALAAAVGQVIRNGMAILGVSCPESM 590


>gi|118594231|ref|ZP_01551578.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440009|gb|EAV46636.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 552

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/563 (35%), Positives = 304/563 (53%), Gaps = 42/563 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +IVIERP+   HG LS+N A+++++ L   P T+A+ IV +I        + IAG GF+N
Sbjct: 24  QIVIERPKSIDHGDLSSNIALVIAKALKKSPRTVAQEIVEKIPSTRSFSKIEIAGAGFLN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            Y S +   KI++  + +   YGR+  G   K+ IEFVSANPTGP+HVGH R A +GD L
Sbjct: 84  FYFSSNTHNKIINDALENNKNYGRSNQGSRKKIQIEFVSANPTGPLHVGHGRGAAIGDCL 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A L  FSG++VTRE+Y NDAG+QI+ L  S+  R    L   D   PE  Y G Y+  + 
Sbjct: 144 ARLFEFSGWDVTREFYYNDAGSQIDNLTKSIKARCMNVL-PEDPSFPEDGYRGEYISDIA 202

Query: 211 KE-LADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           K  LA K     S    +  +      +K+Y +  + K    DL+A  I+ D+F  E  F
Sbjct: 203 KSYLAKKTIQNGSETFSSNGDTTDDDAIKNYGIHYLRKEQDQDLEAFKIRFDVFSLESSF 262

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      I+D++  L   G+ YE                    L  ++T  GDD DR + 
Sbjct: 263 Y--SQGKIKDVVTTLKNNGHTYE----------------KDGALWLKTTAFGDDKDRVMQ 304

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383
           KSDG++TYF  D+AY   K+ERGF  +I   G+DH   V R+ A    +           
Sbjct: 305 KSDGAFTYFVPDIAYHLNKWERGFKRVINEQGADHHSTVNRVRAGLQGLDTGIPPGWPEY 364

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L +++ + ++G  +K+SKRAG ++TLR ++DEVG D+ R+ ++ R+    L FD    K
Sbjct: 365 VLHQMITVMKNGQEVKISKRAGSYVTLRDLIDEVGCDATRYFLIARRADSQLVFDIDLAK 424

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHL 502
            Q+ ENPV+Y+QYA+AR + +  Q       L      R+    E +++T  E +LI  +
Sbjct: 425 SQNNENPVYYIQYAHARIQRVLMQWGGELHSL------RSTA--EYKYETLLEKKLIKKI 476

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            E+P V+E AT    P+++A YL + A+  HG++     N     V+ NN K    RL L
Sbjct: 477 EEFPEVVEAATNDLAPHQIANYLKECAADLHGYY-----NDTKFLVENNNEK--NGRLSL 529

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + A   II +GLN++G+ +P+ M
Sbjct: 530 IFATQHIIKTGLNLLGISAPDSM 552


>gi|313892155|ref|ZP_07825748.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119293|gb|EFR42492.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 554

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 193/549 (35%), Positives = 296/549 (53%), Gaps = 44/549 (8%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G  S+NAAM  +R   + P  IAE++V  I     V    IAG GFIN +L+ + +   L
Sbjct: 44  GDYSSNAAMQWARVAHMAPRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKNTVYAEL 102

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I+  G  YG         V +E+VSANPTGP+H+GH R A  G  + +L+  +GY+V 
Sbjct: 103 KKILAKGENYGDLPRNDEEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVL 162

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            EYYINDAG QI+ LALSV  RY Q L   D+ LPE  Y G  +    + + D+  ++ L
Sbjct: 163 AEYYINDAGNQIDNLALSVNARYLQ-LLGKDAQLPENGYHGHDIIETAQSILDRDGTKYL 221

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              EEK + + K+ +++  +  ++ DL   N++ D+++SE  F+   P  + +++D L +
Sbjct: 222 EMDEEKRIEVFKEVALKEKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKK 278

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G +YE                        +T  GDD DR +++S+G  TYF +D+AY K
Sbjct: 279 NGTLYE----------------KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVK 322

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K ERG+  +I + G+DH GY+ R+++   ++       +++L ++V L RDG P+KMSK
Sbjct: 323 NKIERGYHKLIDIWGADHHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSK 382

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G  +TLR ++DEVG D  R+    R     +DFD    K++S ENPV+Y+QYA AR  
Sbjct: 383 RTGQSVTLRELMDEVGVDVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVH 442

Query: 463 SIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           S+F+QA++       + D+DF +            D SEL LI  +  Y   ++ A   +
Sbjct: 443 SLFKQAEENGVKIPSWEDVDFTVL----------VDESELDLIKKMEVYHGFLKGAAAER 492

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P ++A Y Y+LA++FH  +   R       +     KL   RL L+ AV  ++   L I
Sbjct: 493 APQRIATYAYELAALFHHFYRKCR-------ILGEEEKLMQARLGLIRAVGYVLVHALGI 545

Query: 577 IGVESPNEM 585
           +GV +P EM
Sbjct: 546 LGVSAPEEM 554


>gi|320094246|ref|ZP_08026048.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978824|gb|EFW10365.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 559

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 210/567 (37%), Positives = 313/567 (55%), Gaps = 46/567 (8%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I D + +ERPR+  +G  STNAAM L++  G  P  +A LI   +     V+SV +AG G
Sbjct: 30  IPDPVRVERPRNRDNGDWSTNAAMQLAKRAGTAPRDLAALIADALADAEGVESVEVAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+ L+ S   ++ ++IV +G  YG N    G  +N+E+VSANPTGP+H+G  R A VG
Sbjct: 90  FINIRLAASSAGQLAATIVEAGDSYGTNASLAGQDINLEYVSANPTGPVHLGGARWAAVG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D+LA LM  SG  VTREYY ND G+QI+  A S+   Y +AL     + PE  Y G Y+ 
Sbjct: 150 DSLARLMTASGARVTREYYFNDHGSQIDRFARSL---YARAL---GREAPEDGYGGQYIA 203

Query: 208 HVGKEL-ADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +   + AD  ++ L   +  PEE+ +   +   V+ M   I+  L A   + D+F  ED
Sbjct: 204 DIADRVRADARAAGLPDPVGLPEEEAVEAFRARGVELMFAEIKARLSAFRSEFDVFFHED 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             H  D   +   I+ L  +G V+               D D   +  R+T  GDD DR 
Sbjct: 264 SLH--DSGAVSAAIETLRGRGEVF---------------DRD-GAVWLRTTSYGDDKDRV 305

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQIN 382
           L+KSDG   YFAAD+AY+  K  RG D  +Y++G+DH GY+ R+ A+ AA   E    + 
Sbjct: 306 LIKSDGQAAYFAADVAYYLDKRRRGADAAVYLLGADHHGYIGRMMAMCAAFGDEPGVNMQ 365

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ ++V L +DG P++MSKRAG  +TL  +VD VG D+ R+ ++       LD D   +
Sbjct: 366 ILIGQMVNLVKDGAPVRMSKRAGTIVTLDDLVDAVGVDAARYALVRVSMDSNLDIDLDLL 425

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDT-SELQLI 499
            + + +NPV+YVQYA+AR R++ R A D  +  D  FD          +  DT ++ +L+
Sbjct: 426 TQHTNDNPVYYVQYAHARTRNVARNAADHGVGRDAGFD---------PAALDTAADAELL 476

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNRKLTMM 558
             LA++P  I  A   +EP+++A YL  LA  +H  +   R  PR    V+A +    + 
Sbjct: 477 GALAQFPAQIAQAAQLREPHRVARYLEALAGTYHAWYGQCRVTPRGDDPVEAGH----VA 532

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  AV+ ++ +GL ++GV +P  M
Sbjct: 533 RLWLNDAVSQVLRTGLGLLGVAAPERM 559


>gi|320141851|gb|EFW33679.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 553

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 304/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+S E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHS-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|57866242|ref|YP_187858.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293368064|ref|ZP_06614696.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|71153572|sp|Q5HRD1|SYR_STAEQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57636900|gb|AAW53688.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291317754|gb|EFE58168.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329738198|gb|EGG74413.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 553

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 307/578 (53%), Gaps = 43/578 (7%)

Query: 15  LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           ++EI+  I+      D   I IE P+D  +G  S+N AM+L++    +P  IA+ IV  +
Sbjct: 12  IEEIEVSIRKANLAEDIPEIKIEIPKDPKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71

Query: 73  KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 V  V IAG GFIN YL   YL  I+   +  G  +G     K T + +E+VSAN
Sbjct: 72  DTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA S+  RY +AL +
Sbjct: 132 PTGDLHIGHARNASVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V   M+ ++ DL  
Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYTDEERLKTFRQLGVDYEMEKLKKDLSD 250

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            N+  D + SE   +      I + +  +   GY YE                       
Sbjct: 251 FNVHFDNWFSETSLYEN--GAIENTLSKMKELGYTYEA----------------DGATWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+DH GY+ RL+A  
Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                   ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R  
Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487
               DFD    KEQS++NP++Y QYA+AR  SI +QAK    ++  D DF     +    
Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  +       
Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 516 VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553


>gi|303327748|ref|ZP_07358188.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862109|gb|EFL85043.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 551

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 213/560 (38%), Positives = 312/560 (55%), Gaps = 38/560 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89
           + VIE PRD  HG LSTNAAM+L++    +P  +A+   AR+ +  PD++    AG GF 
Sbjct: 25  KTVIEPPRDPKHGDLSTNAAMLLAKEAKCNPRELAQKFAARLLERCPDLEKAEAAGPGFC 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+  S ++ R+ +  +  +G  YG +  G G KV +E+VSANPTGP+HVGH R A VGD+
Sbjct: 85  NVTFSQAFWRRTVLDVEAAGGAYGASGTGAGRKVLLEYVSANPTGPLHVGHGRGAAVGDS 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA L+  +GY V  EYYINDAG Q+  L LSV+ R  + L     D PE YY G Y+  +
Sbjct: 145 LARLLRKAGYAVDTEYYINDAGRQMRLLGLSVWLRVLE-LAGRPVDWPEDYYRGEYIIDI 203

Query: 210 GKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HR 267
            +E LAD     L + PE +        ++  ++  I+ DL    ++H  + SE     R
Sbjct: 204 AREMLAD--DPHLPDLPEAEGQECCYQRAMNEILAGIKADLNEFRVEHQRWFSEKTLVER 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           G    +      L R GY YE                      F +  +GDD DR L KS
Sbjct: 262 G---AVDAAFTALGRSGYTYE----------------KENAFWFATEQLGDDKDRVLKKS 302

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DGS TYFA D+AY   K+ERG+D +I + G+DH GYV R+ A   A+   +   +V+L +
Sbjct: 303 DGSLTYFATDIAYHHDKFERGYDWLIDIWGADHHGYVPRMRAAITAMGRPRDSFDVVLIQ 362

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV L RDG P+ MS RAG F TL  V+ EVG+D+ RFM L RK+   LDFD    K++S 
Sbjct: 363 LVNLLRDGKPVSMSTRAGTFETLADVLREVGADAARFMFLSRKSDSPLDFDLELAKQRSL 422

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSE-LQLIVHLAEY 505
           +NPV+YVQYA+AR  ++ R+A +    L     P  V  +  +  DT E + L+   A +
Sbjct: 423 DNPVYYVQYAHARICAVLRRAGERGVGL-----PETVTEEMLAGLDTPEDMALLRKAAAF 477

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             ++  A  A   + ++ YL +LA + H +++      R + + A+++  T+ RL L+ A
Sbjct: 478 QDMLAAAARALAAHHVSHYLTELAGLLHSYYA------RHQVLLADDQPRTLARLALLRA 531

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA ++ +GL+++GV +P  M
Sbjct: 532 VAQVLRNGLDVLGVSAPEAM 551


>gi|220904017|ref|YP_002479329.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782958|sp|B8IYS4|SYR_DESDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219868316|gb|ACL48651.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 550

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/564 (35%), Positives = 317/564 (56%), Gaps = 47/564 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89
           + VIE PRD  HG LS N+AM+L+R    +P  +A+   AR+ +  PDV+    AG GF 
Sbjct: 25  KTVIEPPRDPRHGDLSVNSAMLLAREAKTNPRELAQKFAARLLERCPDVEKAEAAGPGFC 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+  S ++ R+ ++ I  +G  YG +    G +V +E+VSANPTGP+HVGH R A VGD+
Sbjct: 85  NVTFSQAFWRQTVTDIESAGQAYGESR-EPGRRVLLEYVSANPTGPLHVGHGRGAAVGDS 143

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA L+  +G+ V  EYYINDAG Q+  L LSV+ R  + L     + PE YY G Y+  +
Sbjct: 144 LARLLRKAGHHVHTEYYINDAGRQMRLLGLSVWLRVLE-LAGRPVEWPEDYYRGDYIIDI 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +E+    +  L + P  +   +  + ++  ++  I+DDL+   ++H  + SE      +
Sbjct: 203 AREMLTA-NPALPDMPAPEGEDLCYEKAMTDILNGIKDDLRDFRVEHLRWFSEKTLV--E 259

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +      L + GY YE                      F +  +GDD +R L KSDG
Sbjct: 260 TGAVDAAFAALGKSGYTYE----------------QDNAFWFATEQLGDDKNRVLKKSDG 303

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           S TYFA+D+AY   K+ERG+D +I V G+DH GY+ R+ A   A+ +++   +V+L +LV
Sbjct: 304 SLTYFASDIAYHHDKFERGYDWLIDVWGADHHGYIPRMRAAITAMGKERDSFDVVLIQLV 363

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R+G P+ MS RAG F TL  V+ EVG+D+ RFM L RK+   LDFD    K++S +N
Sbjct: 364 NLLREGQPVSMSTRAGTFETLADVIKEVGTDAARFMFLSRKSDSPLDFDLELAKQRSLDN 423

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN-VIPQESE------FDTSE-LQLIVH 501
           PV+YVQYA+AR  ++ R+A +           R  V+P++S+       DT+E + L+  
Sbjct: 424 PVYYVQYAHARICAVLRRAAE-----------RGFVLPEKSDAALLAPLDTAEDMTLLRK 472

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
            A +  ++  A  +   + ++ YL +LA + H +++      R + + A++   T+ RL 
Sbjct: 473 AAAFEDMLFAAAQSLGVHHVSHYLTELAGLLHSYYA------RHQVLLADDAPRTLARLA 526

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+ +V  ++ +GL+++GV +P  M
Sbjct: 527 LLRSVGQVVRNGLDVLGVSAPESM 550


>gi|238927166|ref|ZP_04658926.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884948|gb|EEQ48586.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 589

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 203/566 (35%), Positives = 290/566 (51%), Gaps = 44/566 (7%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E   L  I++E P +   G  +TN AM  +R     P  IAE++   I     +D   +A
Sbjct: 63  EGGTLPPILLEEPPNKELGDFATNFAMQSARIFHQPPKKIAEILGTHI-TGSWLDHAEVA 121

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+N YL    +   L  I+ +G  YG         + +E+VSANPTGP+HVGH R A
Sbjct: 122 GPGFLNFYLKKDVIADTLRDILRTGENYGALPPKDLPPIQVEYVSANPTGPLHVGHGRGA 181

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VG  L  L+  +GYEV  EYY+NDAG Q++ LA+SV  RY + L       PE  Y G 
Sbjct: 182 AVGSALVKLLRTAGYEVQSEYYVNDAGKQMDLLAISVNARYLERL-GQKIVFPENGYHGA 240

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +    + + D+     L   EE+ L   KD + +  + ++R+DL    +  D + SE  
Sbjct: 241 DIIDTAQRIIDRDGDRYLALSEEERLEKFKDIAYKEKLAVLREDLADFRVTFDRWFSERT 300

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            H   P  ++ ++D L  +G  YE                    +  RST  GDD DR +
Sbjct: 301 LH---PEAVQRVVDVLLERGTAYE----------------KDGAVWLRSTDYGDDKDRVI 341

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            + +G  TY AAD+AY   KY RGF  ++ + G+DH GYV R++A   A+     Q+ VL
Sbjct: 342 FRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGADHHGYVARVKAAMEALGHDSKQLTVL 401

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V LYRDG  +K+SKR G+ +TLR +++EVG D+ R+  L R     LDFD    K+
Sbjct: 402 LLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGVDAARYFFLMRSLDSQLDFDLDLAKK 461

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-----FDTSELQLI 499
           +S ENPV+Y+QYA+AR  SIFRQA ++  D           P E E      D +E+ LI
Sbjct: 462 KSNENPVYYIQYAHARISSIFRQAAEMRID-----------PAEGEKLDVLTDETEIALI 510

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L  YP  IE A     P ++A Y ++LA+ FH  ++  R       +      L   R
Sbjct: 511 KKLGAYPEEIERAASELAPQRIARYSHELAAAFHSFYNKCR-------IVGQEPVLAAAR 563

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV A   +I   L I+GV +P +M
Sbjct: 564 LSLVLATGHVIRHSLGILGVSAPEKM 589


>gi|295394643|ref|ZP_06804862.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972536|gb|EFG48392.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 546

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 206/560 (36%), Positives = 316/560 (56%), Gaps = 48/560 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87
           ++V+ERP++  HG  +TN A+  ++  GL P    EL     +I  DVD +    +AG G
Sbjct: 30  KLVVERPKNRDHGDWATNVALQTAKKTGLQPR---ELATGLAQILSDVDGIEKAEVAGPG 86

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N+ L+     K+ + IV +G EYGR    K + +N+EFVSANPTGP+H+GH R A +G
Sbjct: 87  FLNITLAAGAAGKLAADIVSAGREYGRGESLKDSTINLEFVSANPTGPLHIGHTRWAALG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +  ++  +G  VT EYYINDAG+Q++T A SV  R +        D+PEG YPG Y+ 
Sbjct: 147 DAIGRVLKAAGATVTTEYYINDAGSQMDTFANSVLARMRG------KDVPEGGYPGQYIA 200

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +EL  ++  E  +  +E     VKD + +A +K I D L++  +  D + SE   H 
Sbjct: 201 DIARELLSRH-PEWNDAKDEDIFEQVKDEAYKAQLKDISDTLESFGVHFDTWFSERTLH- 258

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   I + ++ L  QG+V+E                +   +  R+T  GDD DR L++S
Sbjct: 259 -DTGAIAEAVERLREQGHVFE----------------NEGAIWLRTTDFGDDKDRVLVRS 301

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AVSEKKAQINVLLC 386
           DG  TYFAAD AY+  K +RGF+  IY++G+DH GYV RL+A+AA A  +    I +L+ 
Sbjct: 302 DGVPTYFAADAAYYLNKRDRGFEEKIYLLGADHHGYVGRLKALAATAGDDPNRNIEILIG 361

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +L+ +  +G   ++SKRAG+ I LR +V+ +GSD+VR+ +        L  D   +K  S
Sbjct: 362 QLISV--NGA--RLSKRAGNIIELRDLVEWLGSDAVRYSLARTPADSPLALDPEVLKSAS 417

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            +NPV+YVQYA+AR +S+ R+A       D FD  P  +       D +E  L+  LA+Y
Sbjct: 418 NDNPVYYVQYAHARAKSVERKATSAGVSTDSFD--PATLQ------DPTEAALLSALADY 469

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           PRV+  +   +EP+++A YL  LA +FH  +   R  P           +   RL L  A
Sbjct: 470 PRVVAQSAQLREPHRVARYLESLAGLFHKWYDACRVTP---LGDDPVEPVHSSRLMLDMA 526

Query: 566 VASIINSGLNIIGVESPNEM 585
            A+++++GL+++GV +P  M
Sbjct: 527 TATVLSNGLDLMGVSAPERM 546


>gi|255020170|ref|ZP_05292239.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970312|gb|EET27805.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 580

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 210/597 (35%), Positives = 314/597 (52%), Gaps = 68/597 (11%)

Query: 24  VEKKILDRIV----IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
           VE   L R+     +ERP+  +HG L++N A++L++     P  +AE IVA +   P + 
Sbjct: 17  VESGALSRVPETLELERPKQASHGDLASNVALLLAKDARCKPRELAERIVAAMPASPHIA 76

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
              IAG GFIN +L P   ++++  +   G  +G +  G+G  +++EFVSANPTGP+HVG
Sbjct: 77  RCEIAGPGFINFFLRPEAFQEVVRLVYAQGERFGAHDFGEGETLHLEFVSANPTGPLHVG 136

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R A  G +LA+L+ F GY V  EYY+NDAG Q++ LA SV+ RY   L N   DLP  
Sbjct: 137 HGRGAAYGASLANLLRFCGYRVFCEYYVNDAGRQMDILAASVYLRY---LENAGLDLPWP 193

Query: 200 Y----YPGVYLKHVG----KELADKYSSELLNFP----------------EEKWLPIVKD 235
           Y    Y G YL  +     +E  D+ +    N P                ++    +  D
Sbjct: 194 YPSNAYRGDYLLPIAAALRREFGDRLTPAARNLPDLSRFEDADAAMDALIQQLKTDLGPD 253

Query: 236 YS------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           Y+      +  ++  IR+DL    + +D + SE      D   I   +++L   G+ Y  
Sbjct: 254 YAPLHRAGLDTILADIREDLAEFGVHYDGWYSERSLM--DSGAITRAVESLTAAGHTY-- 309

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                         +    L FRST  GDD DR L + +G+YTYFA+D+AY   K+ RGF
Sbjct: 310 --------------VQDGALWFRSTDYGDDKDRVLRRENGAYTYFASDVAYHADKFARGF 355

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             ++ + G+DH GY+ R+ A   A+    A + +LL +   LYR    + MS RAG+F+T
Sbjct: 356 RQIVDMWGADHHGYIARVRASLRAMGLDDAALEILLVQFAILYRGAEKVSMSTRAGEFVT 415

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +  EVG+D+ RF  + R+  + LDFD    K+ S+ENPV+Y+QYA+AR  S+FRQA+
Sbjct: 416 LRQLRAEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVYYIQYAHARVFSLFRQAE 475

Query: 470 DIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +          P+  +P  S   D  EL L   L  +P  +  +  A+EP+++AFYL +L
Sbjct: 476 EQGLST-----PQAEVPDLSPLQDGRELALADLLWRFPEAVATSARAREPHQIAFYLKEL 530

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS FH +++  R       +    R     RL L  AVA  I +GL ++GV +P  M
Sbjct: 531 ASAFHTYYNATR-------ILVEERDTRHARLALARAVARTIANGLALLGVSAPERM 580


>gi|83591226|ref|YP_431235.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|109895003|sp|Q2RFU7|SYR_MOOTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83574140|gb|ABC20692.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 560

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 201/555 (36%), Positives = 314/555 (56%), Gaps = 33/555 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91
           VIE PRD  HG  + N A++L+R     P  +A  IV  + +  P V  V +AG GFIN 
Sbjct: 37  VIETPRDKTHGDFAANLALLLARQARQSPRNVAAAIVRHLERPQPGVARVEVAGPGFINF 96

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L  +L +++     YG + IG+G KV +EFVSANPTG +H+G+ R A +GD++A
Sbjct: 97  TLDNQWLLPVLPAVLAEDDHYGWSNIGQGAKVQVEFVSANPTGLLHMGNARGAALGDSIA 156

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVG 210
           +L+   GY+VTRE+YINDAG QI    LS+  RY QAL   ++ +PE GY+    +  VG
Sbjct: 157 NLLTAVGYDVTREFYINDAGNQIENFGLSLEARYLQAL-GQEASIPEDGYHGEDLVATVG 215

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + +A KY  + L+        ++  ++++  +  IR  L+   + +D++ SE   H  D 
Sbjct: 216 RFIA-KYGDKYLDTDPALRREMLVRFALEEKLDAIRRALEDFGVTYDVWFSEQSLH--DS 272

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I +L + GY+YE                    L F++T  GD  D  +++ +G 
Sbjct: 273 GAVARAIADLEKAGYIYE----------------KDGALWFKATSFGDVKDEVVVRKNGI 316

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY + K+ERGF+ +I + G+DH G+V RL+    A+     ++ V+L +LVR
Sbjct: 317 PTYFAADIAYHRNKFERGFERVINIWGADHHGHVARLKGALQALGYDPRRLEVVLMQLVR 376

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY+ G  ++MSKR G ++TL  +++EVG D+ R+  +  K+   L+FD    + QS +NP
Sbjct: 377 LYQGGEILRMSKRTGQYVTLEELIEEVGRDAARYFFVMLKSDSHLEFDLDLARSQSADNP 436

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI R AK    D   ++ P      E   D +EL+LI  +A +P  + 
Sbjct: 437 VYYVQYAHARICSILRLAK----DRGLEVPPAREARLELLQDPAELELIKQIAAWPDTVA 492

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A  A EP++L  + +DLAS+FH  ++  R       V A++ ++   RL LV A    +
Sbjct: 493 GAAQALEPHRLTRFAHDLASLFHSFYTSCR-------VLADDPEVRKARLVLVEATRITL 545

Query: 571 NSGLNIIGVESPNEM 585
            + L+++GV +P  M
Sbjct: 546 RNVLHLLGVTAPERM 560


>gi|118602135|ref|YP_903350.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166232836|sp|A1AVC2|SYR_RUTMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118567074|gb|ABL01879.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 567

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 195/581 (33%), Positives = 315/581 (54%), Gaps = 65/581 (11%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + I I+  +D   G  ++N AM+L++  GL P  +A+ I+  +  +  +D V IA  GFI
Sbjct: 27  ENIRIDHTKDKTQGDFASNIAMVLAKRSGLIPKVLAQKIIDNLGDNTQIDKVQIADPGFI 86

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N ++S     +I+  I+     YG+  +GKG ++ +EFVSANPTGP+HVGH R A  G T
Sbjct: 87  NFFISQGESVQIIEQIINQAEHYGKADVGKGQRILLEFVSANPTGPLHVGHGRVAAYGAT 146

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +ASL+   G+EV  EYY+NDAG Q++ LA+SV+ RY +         P+  Y G Y+  +
Sbjct: 147 VASLLRAVGFEVDNEYYVNDAGRQMDILAISVYLRYVET-----EQFPDNGYKGDYIFDI 201

Query: 210 GKELA---------------------DKYSSELL---NFPEEKWLPIVKDYSVQAMMKII 245
            K+++                     +K+   L+    F        + D ++  ++  I
Sbjct: 202 AKKISGVKKLDIFISQRSVKKNAGNKEKHIDRLIANCKFQLGHDYKKILDLAINNILSGI 261

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DL    +++  + SE      D    ++I+  L   GY+YE                 
Sbjct: 262 KIDLVEFGVKYQQWFSEQSLM--DSGLSKEIVKKLQDSGYIYE----------------K 303

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L F++T  GDD+DR +++ +G YTYFA+D+AY   K+ERG+D +I + G DH GY+ 
Sbjct: 304 EGALWFKTTDFGDDLDRVVVRKNGKYTYFASDIAYHLEKFERGYDKIINIWGVDHHGYIA 363

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   A++    ++ +LL + V L+R+G    MS R+G FITL  + +EVG+D+ RF 
Sbjct: 364 RIKASIKALNHNSNKLEILLVQFVNLFRNGKKASMSTRSGSFITLEELREEVGNDAARFF 423

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNV 484
            +  K+ + ++FD    K +S ENPVFY+QYA+AR  S+ +QAK   P + D DL   N 
Sbjct: 424 YILSKSGQHMNFDLDLAKSKSNENPVFYIQYAHARICSVLKQAKS--PSMVDIDLSVLN- 480

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  + SE  LI  L  Y  +++++ +  EP+ LA YL +LA  FH ++++ +    
Sbjct: 481 -------NESEALLIKELNRYKDILQSSALNYEPHVLACYLRELAGHFHSYYNNSK---- 529

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 ++ KL   RL L+ AV  I+ +GLN++GV +P+ M
Sbjct: 530 ---FLVDDDKLRNARLFLIIAVKQILVNGLNLLGVSAPDSM 567


>gi|134102736|ref|YP_001108397.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007807|ref|ZP_06565780.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|166232837|sp|A4FN47|SYR_SACEN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|133915359|emb|CAM05472.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 553

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 202/561 (36%), Positives = 299/561 (53%), Gaps = 46/561 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN AM +++  G+ P  +A  +   +     +DSV +AG GF+NL
Sbjct: 32  VTVERPRNPEHGDYATNIAMQVAKKAGVAPRDLAGWLAEALTGQDGIDSVEVAGPGFLNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+     +IL  ++ +   YGR    +G KVN+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 92  RLAADAQGQILREVLDATDAYGRGAKYQGLKVNLEFVSANPTGPVHLGGTRWAAVGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             +   G EVTREYY NDAGAQI+      F R   A    ++  PE  Y G Y+  +  
Sbjct: 152 RTLEAQGAEVTREYYFNDAGAQIDR-----FVRSLIAAARGEA-APEDGYGGAYIGEIAN 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++ +   + L + PE +     +   V  M   ++  L    +  D++  ED  H     
Sbjct: 206 QVLEAEPTAL-DLPEAERHETFRRIGVGLMFDEVKRSLHDFGVDFDVYFHEDSLHT--SG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   ++ L   G++Y                        RST  GDD DR L+KSDG+ 
Sbjct: 263 AVEKSVEQLKESGHLY----------------FADGAWWLRSTEFGDDKDRVLIKSDGTT 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A D+AY + K  RGFD  IY++G+DH GY+ RL+A AAA  +    + VL+ ++V L
Sbjct: 307 AYIAGDVAYLRDKRNRGFDLCIYMLGADHHGYIPRLKAAAAAFDDDPDAVEVLIGQMVNL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            +DG P++MSKRAG  + L  +VD VG D+ R+ ++       LD D   + ++S ENPV
Sbjct: 367 VKDGKPVRMSKRAGTVLRLEDLVDAVGVDAARYSLIRSSVDSALDIDLDLISKRSNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           FYVQYA+AR  S+ R A  +  D     D DL   +++  E E D     LI  L EYPR
Sbjct: 427 FYVQYAHARLSSLQRNAASLGIDRGSVADADL---SLLTHEREGD-----LIRTLGEYPR 478

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK---LTMMRLQLVH 564
           V+ +A   +EP+++A YL DLAS +H  +         R +Q  + +   LT+ RLQL  
Sbjct: 479 VVRSAAELREPHRIARYLEDLASAYHKFYDA------CRVLQPGDDQATPLTIARLQLCE 532

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL ++GV +P +M
Sbjct: 533 AARQVLANGLGLLGVSAPEQM 553


>gi|254495636|ref|ZP_05108558.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254355206|gb|EET13819.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 586

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 202/572 (35%), Positives = 321/572 (56%), Gaps = 33/572 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++R +D AHG  ++N A+IL++P    P  IAEL+V  +     V+ V IAG GFIN 
Sbjct: 30  IKVDRAKDSAHGDYASNLALILAKPCRQAPRKIAELLVQALPDAAFVEKVEIAGAGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L      +I++ I+    ++GR+ +G+  KV +EFVSANPTGP+HVGH R A  G TL 
Sbjct: 90  FLRSDARSQIIAEILHKEEQFGRSTLGQNQKVLVEFVSANPTGPLHVGHGRSAAFGATLC 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-- 209
           +++  +GY+VT EYY+NDAG Q+N LA SV+ RY + L      +P   Y G Y+  +  
Sbjct: 150 NVLKAAGYDVTSEYYVNDAGRQMNILAASVWLRYLE-LAAEPVVIPANAYKGEYVIEIAQ 208

Query: 210 ------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK----IIRDDLKALNIQHDIF 259
                 GK+    ++  L   P ++     K+  + AM++    ++  D  AL  QH + 
Sbjct: 209 VLWTQHGKQFVHPWAEILNGMPADEPQGGDKEIYIDAMIERANVLLGQDAFALFHQHALT 268

Query: 260 ISEDDFHRGDPSPIRDIIDN------LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
              DD  + D +      DN      L + G + +GI     +  T +       L F++
Sbjct: 269 TVLDDI-KDDLTEFGVHYDNWFSEYSLFQDGSIEKGIQALKDAGHTYE---QEGALWFKA 324

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           T  GD+ DR L++++G  TYFA+D+AY   KY+RGFD +I + G+DH GYV RL +   A
Sbjct: 325 TDFGDEKDRVLVRANGQKTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRLRSAVTA 384

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +   +  + VLL +   LYR G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ +
Sbjct: 385 LGHDERALTVLLVQFAILYRGGDRVQMSTRSGSFVTLRELRQEVGNDAARFFYVARKSEQ 444

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+     D  +   NV   +   +T
Sbjct: 445 HMDFDLDLAKSESSDNPVYYLQYAHARICSVLRQLKERGLLWDKAIGLENVHLLDQPHET 504

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +   LI  +  YP V+E +  + EP+++A+YL +LA+  H +++  +       +     
Sbjct: 505 A---LIALICRYPEVVELSASSCEPHQIAYYLRELANGLHSYYNAVQ-------LLCEQE 554

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L   RL L+ AV  ++++GL+++GV +P  M
Sbjct: 555 QLRCARLCLLAAVRQVLSNGLDLLGVSAPESM 586


>gi|289706375|ref|ZP_06502733.1| arginine--tRNA ligase [Micrococcus luteus SK58]
 gi|289556870|gb|EFD50203.1| arginine--tRNA ligase [Micrococcus luteus SK58]
          Length = 556

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 208/601 (34%), Positives = 326/601 (54%), Gaps = 68/601 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L A  S+ L + +   D   ++  +I   R+ +ERPR   HG  +TN A+ L +  G+ P
Sbjct: 6   LSALLSAVLTDAVDAGDLPAELRGEITPARVKVERPRSREHGDWATNVALQLGKKAGMAP 65

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A L+  R+   P + +V +AG GF+N+ L  +    +   IV +G EYGRN    G 
Sbjct: 66  RDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDALAGH 125

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VN+EFVSANPTGP+H+GH R A +GD +A L+  SG +VT EYY+NDAG Q+N  A SV
Sbjct: 126 TVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADSV 185

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSV 238
             R       +  D+P G YPG Y+    +ELAD  + E   +    +E   P+V++ + 
Sbjct: 186 LARL------HGRDVPAGGYPGAYV----QELADAVALEHPDVRELTDEAARPVVREAAY 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M+ I+D L A ++  D+F SE   H  D   I   +  L  QG++            
Sbjct: 236 RLQMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIEQAVQRLREQGHIE----------- 282

Query: 299 TQKCDMDRKQLLF-RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 DR+  ++ ++T  GDD DR L++++G  TYFAAD AY+  K +RGF+  +Y++G
Sbjct: 283 ------DREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLG 336

Query: 358 SDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +DH GYV RL+A+AAA  +  A  I +L+ +L+ +  +G   K+SKRAG+ I L+ +V+ 
Sbjct: 337 ADHHGYVNRLKAIAAAAGDDPATNIEILIGQLISV--NGA--KLSKRAGNIIELKDLVEW 392

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D++R+ +        L  D   ++  + +NPV+YVQYA+AR     R A+    D  
Sbjct: 393 LGRDALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD-- 450

Query: 477 FDLFPRNVIPQESEFD------TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                       SEFD       +E +L+  LAE+P V+  A   +EP+++A +L  +A 
Sbjct: 451 -----------RSEFDAALLTHATESELLAQLAEFPAVVGAAARLREPHRVARHLEVIAG 499

Query: 531 VFHGHWSHGR------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +H  ++  R      ++   R V+  NR     RL L  A A ++ +GL ++GV +P +
Sbjct: 500 AYHSWYAACRIVPMPTDDGTPRPVETLNR----TRLWLNDATAQVLANGLGLLGVSAPEK 555

Query: 585 M 585
           M
Sbjct: 556 M 556


>gi|282915944|ref|ZP_06323709.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283769772|ref|ZP_06342664.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282320240|gb|EFB50585.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283459919|gb|EFC07009.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 553

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAATNDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|323142043|ref|ZP_08076891.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413430|gb|EFY04301.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 574

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 210/581 (36%), Positives = 305/581 (52%), Gaps = 59/581 (10%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  +++E P     G  +TN AM  +R L   P  IA+ +V  +     VD + IAG GF
Sbjct: 29  LPEVMLEVPPQKEFGDFATNFAMQSARSLHCAPRQIAQAVVDNLDC-ASVDKMEIAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVG 147
           IN YL  ++   +L+ I+ +G  YG NL   G  +V +E+VSANPTGP+HVGH R A VG
Sbjct: 88  INFYLKQNWTADLLAGILAAGENYG-NLPANGLGRVQVEYVSANPTGPLHVGHARGAAVG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-----SDL------ 196
             + +L+  +GY+V  EYYINDAG Q+N LA SV  RY Q L   +     +DL      
Sbjct: 147 SAMVNLLRAAGYDVESEYYINDAGNQMNNLANSVNARYLQLLKLEEMGGVPADLTVKQLD 206

Query: 197 --------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                   PE  Y G  +    + +   Y  E +   E++ L    + + +  +  +++D
Sbjct: 207 EMPTGIPFPENGYHGYDIIETAQRIIRIYGKEFVALEEKERLAKFLEIAYKEKLAGLKED 266

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L+A  +  D++ SE   H  D   IR+    L  +G VYE        K   K       
Sbjct: 267 LEAFGVTFDVWFSEQSLH--DADKIREACKFLEEKGCVYE--------KDGAK------- 309

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
             F ST  GDD DR +++ +G  TYFAAD+AY + K+ERGFD +I + G+DH GY+ R++
Sbjct: 310 -WFNSTAYGDDKDRVVIRDNGVSTYFAADIAYHRNKFERGFDRIINLWGADHHGYIARVK 368

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+     ++ VLL ++VRLYR+G  +K+SKR G+ ITLR ++DEVG D+ R+    
Sbjct: 369 AAVNALGFDADKLEVLLLQMVRLYRNGDIVKLSKRTGETITLRELMDEVGVDAARYFFCM 428

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R     LDFD     E+S ENPV+Y+QYA+AR  SI RQ  +   +         V   E
Sbjct: 429 RSLDSQLDFDMTLATEKSNENPVYYIQYAHARICSIARQLAEAGIEA--------VALDE 480

Query: 489 SEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
            + DT     EL L+  L EYP ++  A   +  + +A Y Y+LA++FH  ++  R    
Sbjct: 481 LKLDTLQAPEELALVKKLGEYPELLARAARERAVHHVATYTYELATLFHSFYNQCR---- 536

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   +  L   R+ LV AV   I   L I+GV +P  M
Sbjct: 537 ---ILGVDTDLQQARIALVKAVGHTIRHALGILGVSAPERM 574


>gi|21282300|ref|NP_645388.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|57650073|ref|YP_185547.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87162053|ref|YP_493299.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194381|ref|YP_499174.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220791|ref|YP_001331613.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161508858|ref|YP_001574517.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141554|ref|ZP_03566047.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253732951|ref|ZP_04867116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|258450930|ref|ZP_05698982.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049698|ref|ZP_06022565.1| arginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051928|ref|ZP_06024142.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282921898|ref|ZP_06329596.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023632|ref|ZP_06378030.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294849263|ref|ZP_06790006.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|297208668|ref|ZP_06925096.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912759|ref|ZP_07130201.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304381781|ref|ZP_07364429.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|23822182|sp|Q8NXT8|SYR_STAAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71153571|sp|Q5HI60|SYR_STAAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109895038|sp|Q2FJ29|SYR_STAA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123291835|sp|Q2G0F8|SYR_STAA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|172048787|sp|A6QER9|SYR_STAAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083553|sp|A8Z117|SYR_STAAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21203737|dbj|BAB94436.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|57284259|gb|AAW36353.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87128027|gb|ABD22541.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201939|gb|ABD29749.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373591|dbj|BAF66851.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160367667|gb|ABX28638.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253729131|gb|EES97860.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257861350|gb|EEV84159.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259160185|gb|EEW45215.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162241|gb|EEW46816.1| arginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940186|emb|CBI48563.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282593751|gb|EFB98742.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294823795|gb|EFG40221.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|296886613|gb|EFH25518.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885863|gb|EFK81066.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302750507|gb|ADL64684.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339732|gb|EFM05678.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315196545|gb|EFU26894.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140058|gb|EFW31919.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|329313330|gb|AEB87743.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329729920|gb|EGG66312.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 553

 Score =  332 bits (852), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|88705210|ref|ZP_01102921.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71]
 gi|88700300|gb|EAQ97408.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71]
          Length = 560

 Score =  332 bits (852), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 301/561 (53%), Gaps = 36/561 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ER RD AHG L++N A+  ++ L + P  +A+ I   +  +  +D   IAG GFIN 
Sbjct: 29  VQVERTRDAAHGDLASNIALASAKLLKMPPRELAQTICDALPENTVIDRTVIAGPGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LS       L  ++  G  YG N  G G KV +EFVSANPTGP+HVGH R A VGD+LA
Sbjct: 89  FLSKDSQAAALLQVLSEGPRYGHNDSGAGRKVQVEFVSANPTGPLHVGHGRGAAVGDSLA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G+EV RE+Y NDAGAQIN LALSV  R  + L   D+  PE  Y G Y+  + +
Sbjct: 149 RILNACGWEVVREFYYNDAGAQINNLALSVQARC-KGLTPQDATWPEDSYRGDYIAELAQ 207

Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                E  +     +    + + L  +++++V  + +    DL++  +  D+F  E   +
Sbjct: 208 AYLAGESVEATDKSVTATGDAEDLDAIREFAVAWLRREQDLDLQSFGVAFDVFFLESSLY 267

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   +D L   G  Y                 +   L  R+T  GDD DR + K
Sbjct: 268 --ESGEVATTVDRLVESGNTYS----------------NDDALWLRTTDFGDDKDRVMRK 309

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL 384
            DG YTYF  D+AY   K+ RGF+ +I   G+DH   V R+ A   A+ E   +     +
Sbjct: 310 KDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHHSTVTRVRAGLQALKEGIPEGWPEYV 369

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + RDG  +K+SKRAG ++TLR +++EVG D+ R+ ++ R  +  L FD      
Sbjct: 370 LHQMVTVMRDGQEVKLSKRAGSYLTLRDLINEVGRDATRYFLVARSPNSQLTFDIDLALS 429

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS +NPVFY+QYA+AR  S+ R  K +  +L  +L P   +  E   +  E++++  LA 
Sbjct: 430 QSNDNPVFYIQYAHARVCSVRR--KFVEAELSLELNP-ETLSLERLIEPQEVEVLKQLAR 486

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P ++  A  + EP ++A YL DLA  FH +++  +       V  ++ +L   RL L  
Sbjct: 487 FPEIVTRAGTSAEPQQIANYLRDLAGEFHAYYNAHK-------VLIDDAELRTARLALTT 539

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  +I +GL+++GV +P  M
Sbjct: 540 AVGQVIANGLDLLGVSAPESM 560


>gi|298693939|gb|ADI97161.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 553

 Score =  332 bits (852), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDTEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|119961159|ref|YP_948334.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166232754|sp|A1R7X2|SYR_ARTAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119948018|gb|ABM06929.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 549

 Score =  332 bits (851), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 198/584 (33%), Positives = 320/584 (54%), Gaps = 41/584 (7%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L A  S+ LK+ +   +  +  E  + D + +ERP++  HG  +TN A+ LS+  G++P 
Sbjct: 6   LSAAISACLKDAVSTGEIAL-TESAVPDAVRVERPKNRDHGDWATNIALQLSKQAGMNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A ++   ++  P V  V IAG GF+N+ +  +    +  +IV +G  YG N    G  
Sbjct: 65  EFAGILSNHLQGIPGVTGVEIAGPGFLNITVDAATAGALAKAIVEAGASYGTNQALAGRV 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R A +GD +A ++  SG +VT EYYINDAG+Q+N  A SV 
Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDAIARVLRASGADVTAEYYINDAGSQMNVFANSVL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R           +PEG YPG Y++ +G E+   +   +    +E  LP+++  + +A M
Sbjct: 185 SRLH------GRGVPEGGYPGEYIRELGDEVLKAHPG-IRELTDEAALPVIRAAAYEAQM 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L    ++ D+F SE + H  D   I   +  L  QG+V++              
Sbjct: 238 SDIKTTLAEFGVEFDVFFSEKELH--DAGAIESAVARLREQGHVFD-------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D   +  R+T  GDD DR +++++G  TYFAAD AY+  K +RGF   IY++G+DH G
Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHG 339

Query: 363 YVKRLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           Y+ RL+A+AA A  + +  I VL+ +LV +  +G   K+SKRAG+ I L+ ++  +G D+
Sbjct: 340 YINRLKAIAACAGDDPEVNIEVLIGQLVSV--NGA--KLSKRAGNIIELKDLISWLGKDA 395

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VR+ +        L  D   +K+ S ENPVFYVQYA+AR R   R A +    +D  +F 
Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGTARNAAE--AGVDRSVFD 453

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +++        +E +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   R 
Sbjct: 454 ASLLDH-----ATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRV 508

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P+    +     +   RL L  A + ++ +GL ++GV +P  M
Sbjct: 509 SPQ---GEEPVLDVNRTRLWLNDATSQVLANGLELLGVSAPERM 549


>gi|89093512|ref|ZP_01166460.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082202|gb|EAR61426.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 561

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 206/584 (35%), Positives = 312/584 (53%), Gaps = 40/584 (6%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S LKN ++       V+ KI+    +E  RD +HG  ++N AM L++    +P  +AE +
Sbjct: 11  SALKNLIENGTLPADVQPKIM----VENTRDKSHGDYASNIAMTLAKAAKSNPRQLAEKL 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V  +    ++    IAG GFIN ++S +    ++ +I+     YGRN  G G KV +EFV
Sbjct: 67  VEALPESDNLKRTEIAGPGFINFFISGASTGNLVKTILTEKEAYGRNNDGAGRKVQVEFV 126

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+H+GH R A VGD L  LM  +G++VTRE+Y NDAG QIN LA SV  R  + 
Sbjct: 127 SANPTGPLHIGHGRGAAVGDCLCRLMDANGWDVTREFYYNDAGQQINNLAFSVQARC-KG 185

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKEL--ADKYSSELLNFPEEK---WLPIVKDYSVQAMMK 243
           L   D   P   Y G Y+  + +     D   SE  +F   K    L  ++ ++V  +  
Sbjct: 186 LTPEDPSWPADGYRGDYIVELAESFMRGDTVKSEDQSFTGTKDAEDLEAIRHFAVAYLRH 245

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
               DL+A  +  D+F  E   +      +   +  L   GY YE               
Sbjct: 246 EQDLDLQAFGVDFDVFFLESSLYT--EGKVEAAVQKLIENGYTYE--------------- 288

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            D   L  R+T  GDD DR + K DG YTYF  D+AY   K++RGFD +I   G+DH   
Sbjct: 289 -DDGALWLRTTDFGDDKDRVMRKKDGGYTYFVPDVAYHLNKWQRGFDTVINEQGADHHST 347

Query: 364 VKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           + R+ A   A+     K   + +L ++V + + G  +K+SKRAG ++TLR +++EVG D+
Sbjct: 348 ITRVRAGLQALKADIPKGWPDYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLIEEVGRDA 407

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+ +  RK+   L FD    + +S +NPV+Y+QYA+AR  SIFR+ K+   +L +D   
Sbjct: 408 TRYFLAARKSDSHLTFDIDLARSESADNPVYYIQYAHARVCSIFRKLKE--NNLSWDEAT 465

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                   E + SE  L+++L  YP V++NA  A+EP+++A YL DLA+ FH ++     
Sbjct: 466 GIEALDSLELE-SEKNLVINLGRYPEVVKNAANAREPHQIANYLKDLAAEFHTYY----- 519

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N     V+  +  L   RL L  AV  ++ +GL+++GV +P +M
Sbjct: 520 NSEKTLVE--DADLRNARLTLAVAVRHVLANGLDLLGVSAPEQM 561


>gi|49482837|ref|YP_040061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424726|ref|ZP_05601153.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427395|ref|ZP_05603794.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430027|ref|ZP_05606411.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432729|ref|ZP_05609089.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435633|ref|ZP_05611681.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282903199|ref|ZP_06311090.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904986|ref|ZP_06312844.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907943|ref|ZP_06315777.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910251|ref|ZP_06318055.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913444|ref|ZP_06321233.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918397|ref|ZP_06326134.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282923362|ref|ZP_06331042.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283957408|ref|ZP_06374861.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500491|ref|ZP_06666342.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509436|ref|ZP_06668147.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293524023|ref|ZP_06670710.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427150|ref|ZP_06819786.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590501|ref|ZP_06949140.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|56749422|sp|Q6GJ61|SYR_STAAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49240966|emb|CAG39634.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272296|gb|EEV04419.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275588|gb|EEV07061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279224|gb|EEV09825.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282144|gb|EEV12279.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284824|gb|EEV14943.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282314230|gb|EFB44620.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317531|gb|EFB47903.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282322476|gb|EFB52798.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325643|gb|EFB55951.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328188|gb|EFB58467.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331811|gb|EFB61322.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596154|gb|EFC01115.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790859|gb|EFC29674.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920986|gb|EFD98047.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095496|gb|EFE25757.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467533|gb|EFF10048.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295128938|gb|EFG58568.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576800|gb|EFH95515.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438970|gb|ADQ78041.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193977|gb|EFU24371.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|323439428|gb|EGA97150.1| arginyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442112|gb|EGA99746.1| arginyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 553

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|220913103|ref|YP_002488412.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254782940|sp|B8HB09|SYR_ARTCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219859981|gb|ACL40323.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 554

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/569 (34%), Positives = 309/569 (54%), Gaps = 47/569 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
            E  + + + +ERP++  HG  +TN A+ L++  G +P   A ++ AR+K    V +V I
Sbjct: 26  AESAVPEDVRVERPKNRDHGDWATNIALQLAKQAGTNPREFATILSARLKTISGVSAVDI 85

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+N+ +  +    +  +IV +G +YG N    G  VN+EFVSANPTGP+H+GH R 
Sbjct: 86  AGPGFLNITVDAAAAGALAKAIVEAGTQYGTNTALAGHTVNMEFVSANPTGPLHIGHTRW 145

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A +GD +A ++  SG +VT EYYINDAG+Q+NT A SV+ R           +PEG YPG
Sbjct: 146 AALGDAIARVLRASGADVTAEYYINDAGSQMNTFANSVYSRLHGL------PVPEGGYPG 199

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y+  +G E+   +  ++    E   LP+++  + +A MK I+  L    +  D+F SE 
Sbjct: 200 QYIADLGHEVLTAH-PDIRELTEVAALPVIRAAAYEAQMKDIKATLADFGVAFDVFFSEQ 258

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           + H  D   I   +  L  QG+V++                D   +  R+T  GDD DR 
Sbjct: 259 ELH--DAGAIESAVARLREQGHVFD----------------DGGAVWLRTTDFGDDKDRV 300

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQIN 382
           +++++G  TYFAAD AY+  K +RG+   IY++G+DH GY+ RL+A+AAA  +  +  I 
Sbjct: 301 MIRANGEPTYFAADAAYYLSKKDRGYTEKIYLLGADHHGYIHRLKAIAAAAGDDPEVNIE 360

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ +LV +  +G   K+SKRAG+ I L+ ++D +G D+VR+ +        L  D   +
Sbjct: 361 VLIGQLVSV--NGA--KLSKRAGNIIELKDLIDWLGKDAVRYSLARFPADSPLTLDPELL 416

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------EL 496
           K+ S ENPVFYVQYA+AR R   R A     +   D            FD S      E 
Sbjct: 417 KKNSNENPVFYVQYAHARSRGAARNAVAAGVERQVD--------GADSFDASLLDHATEN 468

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   R  P     +     + 
Sbjct: 469 ELLSYLGSYPSIVAKAAELREPHRVARHLEAIAGAYHRWYDACRIAP---MGEEAVTDVN 525

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L  A + ++ +GL+++GV +P  M
Sbjct: 526 RTRLWLNDATSQVLANGLDLLGVSAPERM 554


>gi|49485481|ref|YP_042702.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|56749393|sp|Q6GBM1|SYR_STAAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49243924|emb|CAG42350.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
          Length = 553

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 CEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|78484543|ref|YP_390468.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|109895050|sp|Q31J79|SYR_THICR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78362829|gb|ABB40794.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 592

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 202/577 (35%), Positives = 320/577 (55%), Gaps = 35/577 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ +E  RD +HG  +TN AM+L++ +G  P  +AE+IVAR+     ++ V IAG GFIN
Sbjct: 29  RVNVENTRDKSHGDFATNLAMMLTKVVGKPPREVAEMIVARLPESDVIEKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++       +L SI+ +G  +G   +G+G  V +E+VSANPTGP+HVGH R A  G ++
Sbjct: 89  FFVLDVAKFDVLPSILEAGETFGECNVGQGRSVLVEYVSANPTGPLHVGHGRGAAYGASV 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ASL++ +G+ V+REYY+NDAG Q++ LA S + RY Q     +   P   Y G Y+  + 
Sbjct: 149 ASLLSKAGFRVSREYYVNDAGRQMDILAASTWLRYLQHC-GEELTFPSNGYKGDYIFDIA 207

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN--IQHDIFISEDD---- 264
           + L ++    L    E  +  +  D    A  + + D  K ++  I+    +  D+    
Sbjct: 208 QSLYEEKGDALRKPAENVFEGVADDEVTTADGETLGDKEKHIDDLIEKTKVLLGDEHYRV 267

Query: 265 -FHRGDPSPIRDIIDNLARQGYVYE-----------GILPPP--KSKTTQKCDMDRKQLL 310
            F +   + + DI ++LA  G  +E           G++     K +   K    +  L 
Sbjct: 268 VFDKALDAILGDIREDLAEFGVEFENWFSERSLMDSGVIDAALEKLQAAGKIYEKKGALW 327

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F+S+  GD+ DR +++ +G  TYFA+D+AY   K ERGFD +I + GSDH GYV R++A 
Sbjct: 328 FKSSEYGDEKDRVVVRENGLKTYFASDIAYHFNKLERGFDVLIDIWGSDHHGYVPRVKAA 387

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A+      + VLL +   LYR G  + MS R+G F+TLR + DEVG+D+ RF  + RK
Sbjct: 388 MQALDTNPEALEVLLVQFAVLYRGGEKLAMSTRSGQFVTLRELRDEVGADAARFFYVQRK 447

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV--IPQE 488
           + + +DFD    K +S ENPV+Y+QYA+AR   +   A++    LD ++   N+  + QE
Sbjct: 448 SEQHMDFDLDLAKSKSNENPVYYIQYAHARICQVLSLAEERGYQLDTEMGLANLNRLTQE 507

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
            E D + L     LA+YP +I  A +A EP+++A+YL +LA   H +++        +F+
Sbjct: 508 PEADLATL-----LAKYPEIIARAALAYEPHQIAYYLKELAHGLHAYYN------STQFI 556

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 L   RL LV AV  ++ +GL ++ V +P +M
Sbjct: 557 -VEYEPLRNARLTLVVAVRQVLQNGLKLLSVAAPEKM 592


>gi|148272330|ref|YP_001221891.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830260|emb|CAN01194.1| argS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 554

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 193/557 (34%), Positives = 294/557 (52%), Gaps = 35/557 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D +V+ERPR+  HG  +TN AM +++PLG DP TIA  I   +   P V  V +AG GFI
Sbjct: 32  DMVVLERPRNRDHGDWATNIAMRIAKPLGEDPRTIAADIAEALGELPQVAKVDVAGPGFI 91

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +    +  +IV +G  YGR     G ++N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 92  NITLEAAAAGALARTIVDAGPAYGRGHTLDGIRINLEFVSANPTGPIHLGGVRWAAVGDS 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++   G +VTREYY ND G+QI+  A S+   +         D PE  Y G Y+  +
Sbjct: 152 LARILQAEGADVTREYYFNDHGSQIDRFARSLLASHLG------EDTPEDGYGGAYIGEI 205

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + +   Y  +L   P E+   + +    + M   I+  L    +  D+F  ED  H  +
Sbjct: 206 AERVVAGYDGDLDALPREEQQEVFRSAGTELMFGEIKQKLHDFGVDFDVFFHEDSLH--E 263

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +  L   G+V+E                +   +  R+T  GDD DR +++S G
Sbjct: 264 SGAVDRAVARLKELGHVFE----------------EDGAVWLRTTTFGDDRDRVVIRSTG 307

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388
              Y + DL Y+  K ERGF+  I ++G+DH GYV R+ A+A A  +     + +L+ ++
Sbjct: 308 EPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMAEAFGDTPGVNLQILIGQM 367

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L RDG P+KMSKRAG  +TL  +VD VG D+ R+ ++     + LD D   + +++ +
Sbjct: 368 VNLLRDGEPVKMSKRAGTIVTLDDLVDAVGVDAGRYSLVRSSADQNLDIDLAVLGKRTND 427

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR  ++ R A     D       R+    E     +E  L+  L E+PR+
Sbjct: 428 NPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPRI 480

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   +EP+++A Y+ +LA  +H  +   R  PR          L   RL L  AV  
Sbjct: 481 VAQAAELREPHRVARYIEELAGSYHRWYDSCRVVPR---GDEEVTDLHRTRLWLNDAVRQ 537

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL+++GV +P  M
Sbjct: 538 VVANGLDLVGVSAPERM 554


>gi|325295274|ref|YP_004281788.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065722|gb|ADY73729.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 546

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 202/562 (35%), Positives = 315/562 (56%), Gaps = 43/562 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           ++D+   E+P+   +G L+TN + +L++ L   P +IA  ++  ++  P+ + V +AG G
Sbjct: 24  LVDKASFEKPKKREYGDLATNISFLLAKELKQKPFSIANELLKSLESMPEFEKVEVAGGG 83

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN + S  +   IL  ++    E+  + IGKG +V +E+VSANPTGP+HVGH R AVVG
Sbjct: 84  FINFFFSQRFYTDILKKVLHE--EFYISEIGKGERVLLEYVSANPTGPLHVGHGRGAVVG 141

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L  +M  +GY+  RE+YINDAG QI  L +S++ R ++ L   +   PE  Y G Y+ 
Sbjct: 142 DVLYRVMRLTGYKPEREFYINDAGRQIKLLGVSIYARMKE-LSGENYPFPEDGYKGEYII 200

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V KEL  +   E+++ PEE+ + I  ++  + +++ IR DLK L ++ D + SE   + 
Sbjct: 201 EVAKELLAE-RPEIISLPEEEAIEIAAEFGKERLLEEIRKDLKDLRVKFDYWFSEKSLY- 258

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +  I+  L  +  +YE                    L  ++T+ GDD DR + +S
Sbjct: 259 -EKGEVERILKILEEKDLLYE----------------KDGALWLKTTIFGDDKDRVVKRS 301

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +G YTYFA+D+AY   K ER FD  I V G+DH GY+ R++A   A+ +    + V+L +
Sbjct: 302 NGEYTYFASDIAYHYNKIERNFDKAINVWGADHHGYIPRVKAAIQALGKNPDWLEVILIQ 361

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV+L+++G  +KMSKRAG+F+TLR ++DEVG D+VRF  L +++   LDFD         
Sbjct: 362 LVKLFKNGEEVKMSKRAGNFVTLRWLMDEVGVDAVRFFFLLKRHDTPLDFDIDLALSSKS 421

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP----QESEFDTSELQLIVHLA 503
           ENPV+YVQYA+AR  SI  +AK+           +  +P     E      E +LI    
Sbjct: 422 ENPVYYVQYAHARLCSILDKAKE-----------KGFVPSEENLELLSSEEERELIAGCY 470

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
                +E     +EP++L +YL DLAS  H  ++      + R +   + KL+  RL L+
Sbjct: 471 NLKYELELVAEKREPHRLTYYLIDLASKLHRFYN------KHRVIMEEDPKLSTARLSLI 524

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV   IN GL+I+ V +P  M
Sbjct: 525 KAVRRTINLGLDILNVTAPRRM 546


>gi|114331591|ref|YP_747813.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313625|sp|Q0AFN4|SYR_NITEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114308605|gb|ABI59848.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 586

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 208/612 (33%), Positives = 327/612 (53%), Gaps = 65/612 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S     L +   ++  E+  +  I ++RP+   HG  STN AM L++ L  +PL +A
Sbjct: 8   DFRSHCVQLLAQAVKQVLPEETEI-HIELQRPKQMDHGDYSTNLAMKLAKRLRRNPLELA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++++  +   P V    +AG GF+N +L  +  ++ L +++ +   +G + +G G  + I
Sbjct: 67  KVLIGALPDSPYVGKTVVAGGGFVNFFLKKTAKQQFLLTVLQAADSFGHSKLGAGKTIQI 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA++MA +GY VTRE+Y+NDAG Q++ LALS + RY
Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANIMAAAGYAVTREFYVNDAGRQMDILALSTWLRY 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVK------- 234
              L       P   Y G Y+  +  E+     D+Y+    + P ++   I         
Sbjct: 187 LD-LCGIALPFPSNAYQGRYVVDMALEIHRIHGDRYA-HYSDSPTQQLAEINAKAAADGE 244

Query: 235 ----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
               D  + A   I+ +D   L   H+  ++E          + D  ++L   G  +E  
Sbjct: 245 DEYLDNLITAAKSILGEDYAYL---HNFVLTEQ---------LNDCRNDLMEFGVEFENW 292

Query: 291 LPPPK-------SKTTQKCDMDRK-------QLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
                       ++  Q  D D+K        L F+ST  GD+ DR + + +G YTYFA+
Sbjct: 293 FSEQSLFDSGMVARAVQLLD-DKKLLYRQDGALWFQSTGFGDEKDRVVQRENGQYTYFAS 351

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D+AY   KYERGFD M+ + G+DH GY+ R++    A+S    ++ + L +   LYRDG 
Sbjct: 352 DIAYHLSKYERGFDYMLNIWGADHHGYISRVKGAIEALSLDSDKLEIALVQFAVLYRDGN 411

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
            I MS R+G+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+YVQY
Sbjct: 412 KISMSTRSGEFVTLRQLRQEVGNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVYYVQY 471

Query: 457 AYARCRSIFRQ---AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           A+AR  S+  Q   A DIF   + +L            + +EL L+  + ++P  IE A 
Sbjct: 472 AHARICSVLEQWGGAVDIFGRAETELLT----------NPAELVLLQKIIDFPDTIEAAA 521

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +AF+L +LAS FH +++        RF+   +  L + RL L+ AV  +++ G
Sbjct: 522 KEHAPHLIAFFLRELASEFHSYYN------STRFL-IPDEALKIARLALISAVCQVLSKG 574

Query: 574 LNIIGVESPNEM 585
           L+++GV SP +M
Sbjct: 575 LSLLGVTSPRKM 586


>gi|258422795|ref|ZP_05685698.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257847026|gb|EEV71037.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 553

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHIAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|298505924|gb|ADI84647.1| arginyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 568

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 202/569 (35%), Positives = 302/569 (53%), Gaps = 52/569 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90
           IV+E+P    HG  +  AAM++++     P  IAE+I+  +   +  V+SV IAG GFIN
Sbjct: 37  IVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAEIIITHLNDRESLVESVEIAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +  S   ++L  I   G +YG +  G G KV +EFVSANPTGP+H+GH R A +GDT+
Sbjct: 97  FRMRTSAWCRVLRRIEREGGDYGESEAGAGKKVQVEFVSANPTGPLHIGHGRGAAIGDTI 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+A  G++VTRE+Y NDAG QI  LALSV  R    +   D   P   Y G Y+K V 
Sbjct: 157 CRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGVEPGDPLWPTDGYQGEYIKDVA 215

Query: 211 -----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                +E  D     +    +   +  ++ ++V  + +    DL+A ++  D++  E   
Sbjct: 216 RSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAYLRREQDQDLRAFDVGFDVYFLESSL 275

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + D++  +  +G+ YE                    L  R+T  GDD DR + 
Sbjct: 276 YA--EGRVDDVVQRIIAKGHAYE----------------QDGALWLRTTEFGDDKDRVMR 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383
           KSDGSYTYF  D+AY   K+ERGF  ++   G+DH   + R+ A   A+     K     
Sbjct: 318 KSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADHHSTITRVRAGLQALDAGIPKGWPEY 377

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + R G  +K+SKRAG ++TLR +VDEVG D+ RF  L RK    L FD    K
Sbjct: 378 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVGRDATRFFFLMRKPDSQLVFDIDLAK 437

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-------ESEFDTSEL 496
           +Q+ ENPV+YVQYA+AR  SIF  A D           + V+P        ES     EL
Sbjct: 438 QQTLENPVYYVQYAHARICSIFENAAD-----------KGVVPPTVDQASLESLGTPEEL 486

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L+ +P ++E + +  EP+++ +YL +LA  FH  ++  R       V   +  LT
Sbjct: 487 TLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNKNR-------VITEDADLT 539

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+H+ A++I +GL ++GV +P +M
Sbjct: 540 GARLLLLHSTATVIRNGLGLLGVSAPEKM 568


>gi|282928743|ref|ZP_06336338.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282589626|gb|EFB94713.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 553

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPCEIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|325963846|ref|YP_004241752.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469933|gb|ADX73618.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 554

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/587 (34%), Positives = 318/587 (54%), Gaps = 50/587 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S+ LK+ +   D  +     + D + +ERP++  HG  +TN A+ L++  G +P   A 
Sbjct: 10  ISACLKDAVAAGDIALPA-SAVPDEVRVERPKNRDHGDWATNIALQLAKQAGTNPREFAT 68

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           ++  R+K    V +V IAG GF+N+ +  +    +  +IV +G EYG N    G  VN+E
Sbjct: 69  VLSTRLKAIEGVAAVDIAGPGFLNITVDAAAAGALAKAIVEAGKEYGTNSALAGHTVNME 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R A +GD++A ++  SG +VT EYYINDAG Q+N  A SV+ R  
Sbjct: 129 FVSANPTGPLHIGHTRWAALGDSIARVLRASGADVTAEYYINDAGTQMNVFAHSVYNRLH 188

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                    +P+G YPG Y+  +G E+  ++  ++    E   +P+++  + QA MK I+
Sbjct: 189 GL------PVPDGGYPGQYIADLGHEVLAEH-PDIRELTEVAAVPVIRAAAYQAQMKDIK 241

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L    ++ D+F SE + H  D   I   +  L  QG+V++                D 
Sbjct: 242 STLADFGVEFDVFFSEQELH--DAGAIESAVARLREQGHVFD----------------DG 283

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  R+T  GDD DR L++++G  TYFAAD AY+  K +RGF   IY++G+DH GY+ R
Sbjct: 284 GAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHGYINR 343

Query: 367 LEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           L+A+AAA  +  +  I VL+ +LV +  +G   K+SKRAG+ I L+ ++D +G D+VR+ 
Sbjct: 344 LKAIAAAAGDDPEVHIEVLIGQLVSV--NGA--KLSKRAGNIIELKDLIDWLGKDAVRYS 399

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +        L  D   +K+ S ENPVFYVQYA+AR R   R A     D   D       
Sbjct: 400 LARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGAARNAVAAGVDRQVD------- 452

Query: 486 PQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  FD S      E +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   
Sbjct: 453 -GKDSFDASLLDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDAC 511

Query: 540 RENPRL-RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P     V   NR     RL L  A + ++ +GL+++GV +P  M
Sbjct: 512 RIAPMGDEAVTDVNR----TRLWLNDATSQVLANGLDLLGVSAPERM 554


>gi|167772363|ref|ZP_02444416.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM
           17241]
 gi|167665466|gb|EDS09596.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM
           17241]
          Length = 564

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 194/567 (34%), Positives = 305/567 (53%), Gaps = 47/567 (8%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKG 87
           L   V+E P D +HG  ++N AM  +RP    P  IAE I A + +   V + V IAG G
Sbjct: 35  LPDFVVEIPADTSHGDFASNIAMACARPFKCAPRKIAEAICAALDLTGTVFERVEIAGPG 94

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN +LSP +   ++ S++ +G +YGR   G+G KV +EFVSANPTGPMH+G+ R   +G
Sbjct: 95  FINFFLSPRWFADVVKSVLSAGADYGRTDYGRGEKVQVEFVSANPTGPMHMGNARGGALG 154

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYL 206
           D LA+ + +SG+ VTRE+Y+NDAG QI     S+  RY Q     D+   PE  Y G  +
Sbjct: 155 DCLAAALDWSGHNVTREFYVNDAGNQIEKFGCSLEARYLQIFKGEDAVAFPEDGYHGDDI 214

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           +   ++ AD++    +          + D+++   ++ ++ DL+   I +D++  E + H
Sbjct: 215 RERAQQFADQFGDRFVESDSAARRQALVDFALPRNIEKLKADLERYRIHYDVWFRESELH 274

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            G    I + I  L  +G  YE                    L +R+T  G + D  L++
Sbjct: 275 HG---AIDEAIRVLTARGMTYE----------------QDGALWYRATENGGEKDEVLVR 315

Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           ++G  TYFAAD+AY   K+  RGF+ +I V G+DH G+V RL+    A+     +++++L
Sbjct: 316 ANGFPTYFAADIAYHYNKFAVRGFERVINVWGADHHGHVARLKGAMDAIGLNGDRLDIVL 375

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            + VRL +DG P+KMSKR G  I+L  +++EV  D+ RF+   R+ + ++DFD     EQ
Sbjct: 376 MQFVRLMQDGKPVKMSKRTGKAISLTDLIEEVPVDAARFLFNMREPNSMVDFDLDLAVEQ 435

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-------SELQL 498
           S +NPV+YVQYA+AR  S+ ++ +D             V P+   +D         E++L
Sbjct: 436 SMQNPVYYVQYAHARICSLLKKLED-----------EGVAPRACTYDELCALRAPEEIEL 484

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           I  LA +P+ I ++    +P +L  Y  DLA+VFH H++  R       V+     L   
Sbjct: 485 IRTLARFPQEIIDSVRGYDPARLTKYATDLATVFHKHYTVHR-------VRGEAEPLMQA 537

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A  ++I + L ++ +  P  M
Sbjct: 538 RLNLYLATRTVIANVLGMLKITVPESM 564


>gi|315443349|ref|YP_004076228.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315261652|gb|ADT98393.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 550

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 301/586 (51%), Gaps = 44/586 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L D + +ERPR+  HG  +TN A+ L + +G +P  
Sbjct: 4   ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + +  +AG GF+NL +  S    ++S+++ +G +YG + +  G KV
Sbjct: 64  LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K    +L+ P+++     +   V  M  
Sbjct: 184 AAKG------EPAPEDGYAGTYIADIASQVVAKEPG-VLDQPDDRMRETFRAIGVNMMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   ID L   G+ YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVEQAIDKLRETGFAYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG   Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           + P  +  D      E  LI ++ E+PR++  A   +EP++++ YL DLA  +H  +   
Sbjct: 448 IAPDTAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDAC 507

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P+      +   L   RL L  A   +I +GL+I+GV +P  M
Sbjct: 508 RVLPQGDEAPGD---LHAARLALCAATRQVIANGLDILGVSAPERM 550


>gi|15926285|ref|NP_373818.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|148267067|ref|YP_001246010.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393115|ref|YP_001315790.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257793189|ref|ZP_05642168.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407674|ref|ZP_05680809.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420362|ref|ZP_05683307.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258436509|ref|ZP_05689167.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258442357|ref|ZP_05691120.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446271|ref|ZP_05694429.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258450070|ref|ZP_05698167.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258455109|ref|ZP_05703071.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269202229|ref|YP_003281498.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282895046|ref|ZP_06303268.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|295406988|ref|ZP_06816791.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276963|ref|ZP_06859470.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246149|ref|ZP_06930004.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|21542256|sp|Q99W05|SYR_STAAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083551|sp|A6TZ85|SYR_STAA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083552|sp|A5IQG1|SYR_STAA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13700499|dbj|BAB41796.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|147740136|gb|ABQ48434.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945567|gb|ABR51503.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257787161|gb|EEV25501.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840754|gb|EEV65212.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843676|gb|EEV68080.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848780|gb|EEV72766.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257852086|gb|EEV76018.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854865|gb|EEV77810.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257856689|gb|EEV79593.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257862749|gb|EEV85515.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262074519|gb|ACY10492.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282762629|gb|EFC02767.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816308|gb|ADC36795.1| Arginyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968219|gb|EFG44245.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176995|gb|EFH36251.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315128881|gb|EFT84879.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329724382|gb|EGG60893.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 553

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|256380151|ref|YP_003103811.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255924454|gb|ACU39965.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 550

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/557 (34%), Positives = 293/557 (52%), Gaps = 41/557 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERPR+  HG  +TN A+  ++  G  P   A  +   +  +  +  V +AG GF+NL
Sbjct: 32  VTIERPRNPEHGDYATNVALQTAKKAGTSPREFATWLAEALTSNDALSEVTVAGPGFLNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+P     I+  I+  G ++GR+ +  G ++N+EFVSANPTGP+H+G  R A  GD L 
Sbjct: 92  RLAPDAQAAIVREIITKGEDFGRSDLLAGRRINLEFVSANPTGPLHLGGTRWAATGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++A SG +VTREYY NDAGAQI+    S+    +          PE  Y G Y+  +  
Sbjct: 152 RVLAASGADVTREYYFNDAGAQIDRFVRSLIAAAKG------EPAPEDGYAGSYISDIAA 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  +    L     E    + +   V  M   I+ DL       D+F  ED  H+    
Sbjct: 206 EVLRQEPDALT---AEDGPEVFRRIGVNLMFDEIKRDLHDFGTDFDVFFHEDSLHK---- 258

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
                       G V   +    K K + K   +      RST  GDD DR ++KSDG+ 
Sbjct: 259 -----------SGAVTTAV---EKLKGSDKLYFENGAWWLRSTEFGDDKDRVVIKSDGAP 304

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A D+AY   K  RGFD  IY++G+DH GY+ RL+A AAA+ +    + VL+ ++V L
Sbjct: 305 AYIAGDIAYLVDKRSRGFDLCIYMLGADHHGYIGRLKAAAAALGDDPDSVEVLIGQMVNL 364

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             DG P++MSKRAG+ I++  +VD VG D+ RF M+       +D D   ++++S ENPV
Sbjct: 365 VSDGKPVRMSKRAGNIISMEDLVDAVGVDAARFAMIRASVDSSVDIDLDLLRKRSSENPV 424

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQYA++R  S+ R A+ +  + +  L    ++  E+E       LI  L E+PRV++ 
Sbjct: 425 YYVQYAHSRICSVLRNAEALKVEANDSL---QLLDSEAEG-----TLIRALGEFPRVVKA 476

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RLQLVHAVAS 568
           A   +EP+++A YL+ LA   H  + H    P LR +   + + T +   RL+L  A   
Sbjct: 477 AAELREPHRVATYLHSLAGDLHRWYDH---KPALRILPRGDEEPTELHGARLRLCQATQR 533

Query: 569 IINSGLNIIGVESPNEM 585
           +  +GL ++GV +P  M
Sbjct: 534 VFANGLALLGVTAPERM 550


>gi|145222884|ref|YP_001133562.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189083540|sp|A4T8M4|SYR_MYCGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145215370|gb|ABP44774.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 550

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 301/586 (51%), Gaps = 44/586 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L D + +ERPR+  HG  +TN A+ L + +G +P  
Sbjct: 4   ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + +  +AG GF+NL +  S    ++S+++ +G +YG + +  G KV
Sbjct: 64  LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K    +L+ P+++     +   V  M  
Sbjct: 184 AAKG------EPAPEDGYAGTYIADIASQVVAKEPG-VLDQPDDRMRETFRAIGVNLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   ID L   G+ YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVEQAIDKLRETGFAYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG   Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           + P  +  D      E  LI ++ E+PR++  A   +EP++++ YL DLA  +H  +   
Sbjct: 448 IAPDTAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDAC 507

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P+      +   L   RL L  A   +I +GL+I+GV +P  M
Sbjct: 508 RVLPQGDEAPGD---LHAARLALCAATRQVIANGLDILGVSAPERM 550


>gi|253731229|ref|ZP_04865394.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724970|gb|EES93699.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|329729647|gb|EGG66048.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 553

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|312829102|emb|CBX33944.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
          Length = 553

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GGILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|296170233|ref|ZP_06851826.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295895109|gb|EFG74827.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 550

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 203/593 (34%), Positives = 304/593 (51%), Gaps = 58/593 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +  +  ++   L   V +ERPR+  HG  ++N A+ L + +G++P  
Sbjct: 4   ADLAELLRTTASAVLAEHSLDAAALPATVTVERPRNPEHGDYASNLALQLGKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     V S  +AG GFINL L  S   KI++++V +G  +G +    G K+
Sbjct: 64  LAGWLAAAVSQADGVASAEVAGPGFINLRLEASAQAKIVNAVVDAGDGFGHSDALAGHKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVEREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K + + L+ PE +     +   V  M  
Sbjct: 184 AAKG------EATPEDGYAGAYINDIAAQVLAK-APDALSLPEAEMRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            D    L R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 280 KDGASWL-RTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA  +  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAAFGDDPAHVEVLIGQMVNLVRDGAPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           V+P     DT  L+L+ H         + E+PRV++ A   +EP+++  YL DLA  +H 
Sbjct: 448 VVP-----DTGHLELLSHDKEGTLLRSIGEFPRVLKTAASLREPHRVCRYLEDLAGDYHR 502

Query: 535 HWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P     Q + R   L   RL L  A   +I +GL I+GV +P  M
Sbjct: 503 FYDSCRVLP-----QGDERPTDLHAARLALCEATRQVIANGLTILGVTAPERM 550


>gi|300088120|ref|YP_003758642.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527853|gb|ADJ26321.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 557

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 198/557 (35%), Positives = 316/557 (56%), Gaps = 38/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E P++  HG  +++  + ++R  G+ PL IA  IV  I   P++ SV +A  GFIN 
Sbjct: 36  VGVEHPQNTGHGDYASSLPLKMARATGMKPLDIAAAIVEFIPEIPEIKSVAVAPPGFINF 95

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS  ++ + + +++ +G  YG    G G  V +E+VSANPTGP+HVGH R AV+G TLA
Sbjct: 96  TLSDGWIIEQVEAVIKTGDTYGCIDTGAGRTVQLEYVSANPTGPIHVGHGRGAVLGSTLA 155

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVG 210
             +  +GY+V +E+Y+NDAG QI +   S+  RY QAL   D+++P EGY+ G Y+  + 
Sbjct: 156 RALQAAGYKVQQEFYVNDAGNQIASFKRSLRARYLQAL-GRDAEMPAEGYF-GRYMTDLA 213

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD 269
            ++A ++     N  E++ L  +    ++ M+ +IRDDL  L +  D + SE   F  G+
Sbjct: 214 GDIAAEHGDAFANLTEDEALEKLGAIGLERMLGVIRDDLSGLGVNFDRWFSERSLFESGE 273

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
                 +ID L + GY+ E                    + F ST +G++ D  +++SDG
Sbjct: 274 ---YEAVIDRLKQSGYITE----------------KEGAVWFASTALGENKDNVIVRSDG 314

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           + TYFA+D+AY   K+ +RGFD +I + G+DH G+V R++AV  A+     ++++++ +L
Sbjct: 315 TPTYFASDIAYHYDKFVKRGFDKVINIWGADHQGHVSRMKAVLQALDIDPERLHIIIAQL 374

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R    +++SKR GD ITLR V+DEVG+D+ RF  L R     +DFD    K+QS +
Sbjct: 375 VTLRRGEELVRLSKRTGDMITLREVLDEVGADACRFNFLARGADSQMDFDLELAKKQSAD 434

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA+AR  SI   A +   D       R V P       +EL+L+  +   P V
Sbjct: 435 NPVYYVQYAHARICSIIELAAERGIDYHAGDVTRLVEP-------AELELLRKMLLLPEV 487

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I   T   EP+ LA+Y   LA+ FH  +   R       V +++  L+  RL+L++A   
Sbjct: 488 IAQVTETLEPHHLAYYAQVLATAFHAFYKDCR-------VVSDDLCLSQARLKLMYAARR 540

Query: 569 IINSGLNIIGVESPNEM 585
           ++   L ++G+ +P++M
Sbjct: 541 VLARTLELMGMSAPDKM 557


>gi|283469905|emb|CAQ49116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 553

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 302/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  + +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNILLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++   T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIVKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|297570951|ref|YP_003696725.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931298|gb|ADH92106.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 557

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 188/573 (32%), Positives = 305/573 (53%), Gaps = 39/573 (6%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77
           +   I ++ + L  + +ERPR   HG  +TN AM L +  G++P   A+L+V ++  DP 
Sbjct: 19  VAGTIALDPETLPEVRVERPRVREHGDWATNVAMQLGKKAGMNPREFAQLVVDKLIEDPG 78

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           VD   IAG GFIN+ ++ +   ++  +I+  G  +G     KG  +N+E+VSANPTGP+H
Sbjct: 79  VDHADIAGPGFINITVNAAVAGELARTILEKGEAFGLGESLKGDVINLEYVSANPTGPIH 138

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +G  R A VGD+LA ++  SG  V REYY ND G+QI+  A S+  R +        + P
Sbjct: 139 IGGARWAAVGDSLARILEASGARVIREYYFNDHGSQIDRFAKSLLARARGL------EAP 192

Query: 198 EGYYPGVYLKHVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           E  Y G Y++ + + + ++ S  S+ L   +E+     +++ V  M   I+ +L    ++
Sbjct: 193 EDGYGGQYIEDIARAVLEEKSNGSDPLALADEQAQEFFREHGVTRMFGEIKKELADFRVE 252

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  ED  H  +   +   ID+L  +G +YE                       RST 
Sbjct: 253 FDVYFHEDSLH--ESGAVNQAIDDLRNKGVIYE----------------QDGATWLRSTD 294

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GDD DR ++KSDG   YFA D+AY+  K ERG D++I ++G+DH GY+ R+ A+A A  
Sbjct: 295 FGDDKDRVIIKSDGDAAYFAGDIAYYLNKRERGADHVIIMLGADHHGYIGRMYAMARAFG 354

Query: 376 E---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           +   K   + +L+ +LV L +DG P++MSKRAG  + L  +VD  G D+ R+ ++     
Sbjct: 355 DTAGKGENLELLIGQLVNLVQDGQPVRMSKRAGTIVVLSDLVDAAGVDAARYSLVRAAMD 414

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             L+ D   +  ++ ENPV+YVQYA+AR +S+   A             R V        
Sbjct: 415 TTLEIDLGLISSRTNENPVYYVQYAHARTKSVDANAAS-------HGVTREVFTPALLDS 467

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            ++ +LI  LA++P ++  +   +EP+++A YL +LA  +H  +   R  PR        
Sbjct: 468 AADSELIAKLAQFPEIVAQSAQLREPHRVARYLEELAGAYHAWYGASRVTPR---ADEEV 524

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L   RL L  A   ++ +GL+++GV +P +M
Sbjct: 525 SDLHRTRLWLNDAAGQVLANGLSLLGVSAPEKM 557


>gi|82750314|ref|YP_416055.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|109895039|sp|Q2YSW8|SYR_STAAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|82655845|emb|CAI80247.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 553

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/559 (35%), Positives = 302/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K   E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEK-RPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLAS FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|302332319|gb|ADL22512.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 553

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|194364058|ref|YP_002026668.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693501|sp|B4STE2|SYR_STRM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194346862|gb|ACF49985.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 562

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 201/562 (35%), Positives = 306/562 (54%), Gaps = 40/562 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ +V  +    DV  V IAG GFIN Y
Sbjct: 32  VVERPKTRDHGDFATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFY 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++  +S++  G +YGRNL G G  V +E+VSANPTGP+HVGH R A +GD +A 
Sbjct: 92  LAPAAYQREAASVIKEGHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++  +G+   RE+Y NDAG QI  L+LSV  R +    + D   PEG Y G Y+  V + 
Sbjct: 152 VLDANGWNAKREFYYNDAGVQIENLSLSVQARVKGIAPDQDG-WPEGGYRGEYIADVARA 210

Query: 213 LADKYSSEL-----LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                S +L     +   + K +  ++ ++V  +      DL A  +  DI+  E   + 
Sbjct: 211 YMAGASVDLEGTLVVGAKDAKDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYA 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  RST  GDD DR + KS
Sbjct: 271 --DGKVAEAVAKLQASGHTYE----------------EGGALWLRSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG++TYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  V   +     +L
Sbjct: 313 DGTFTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG + TLR +++E G D+ R+ ++ RK    L FD    ++Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAE 504
           S +NPVFYVQYA+AR  S+ RQA++    L ++    N +       D + L L+  ++ 
Sbjct: 433 SNDNPVFYVQYAHARVCSLLRQAQE--KGLVYE--QGNGLANLGRLSDDASLLLMNEISR 488

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLV 563
           YP V+E A +A EP+ +A YL +LA  FH  W HG   P L    A+ N KLT     L 
Sbjct: 489 YPEVVEAAGVALEPHLVAQYLRELAHAFH-TWYHG--TPVLVDDSADRNAKLT-----LA 540

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +GL ++GV +P +M
Sbjct: 541 CAARQVLANGLELLGVSAPEKM 562


>gi|39996911|ref|NP_952862.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39983799|gb|AAR35189.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 568

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 302/569 (53%), Gaps = 52/569 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90
           IV+E+P    HG  +  AAM++++     P  IAE+I+  +   +  V+SV IAG GFIN
Sbjct: 37  IVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAEIIITHLNDRESLVESVEIAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +  S   ++L  I   G +YG++  G G KV +EFVSANPTGP+H+GH R A +GDT+
Sbjct: 97  FRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQVEFVSANPTGPLHIGHGRGAAIGDTI 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+A  G++VTRE+Y NDAG QI  LALSV  R    +       P   Y G Y+K V 
Sbjct: 157 CRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGVEPGGPLWPTDGYQGEYIKDVA 215

Query: 211 -----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                +E  D     +    +   +  ++ ++V  + +    DL+A ++  D++  E   
Sbjct: 216 RSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAYLRREQDQDLRAFDVGFDVYFLESSL 275

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + D++  +  +G+ YE                    L  R+T  GDD DR + 
Sbjct: 276 YA--EGRVDDVVQRIIAKGHAYE----------------QDGALWLRTTEFGDDKDRVMR 317

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383
           KSDGSYTYF  D+AY   K+ERGF  ++   G+DH   + R+ A   A+     K     
Sbjct: 318 KSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADHHSTITRVRAGLQALDAGIPKGWPEY 377

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + R G  +K+SKRAG ++TLR +VDEVG D+ RF  L RK    L FD    K
Sbjct: 378 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVGRDATRFFFLMRKPDSQLVFDIDLAK 437

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-------ESEFDTSEL 496
           +Q+ ENPV+YVQYA+AR  SIF  A D           + V+P        ES     EL
Sbjct: 438 QQTLENPVYYVQYAHARICSIFENAAD-----------KGVVPPTVDQASLESLGTPEEL 486

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L+ +P ++E + +  EP+++ +YL +LA  FH  ++  R       V   +  LT
Sbjct: 487 TLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNKNR-------VITEDADLT 539

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+H+ A++I +GL ++GV +P +M
Sbjct: 540 GARLLLLHSTATVIRNGLGLLGVSAPEKM 568


>gi|326771976|ref|ZP_08231261.1| arginine--tRNA ligase [Actinomyces viscosus C505]
 gi|326638109|gb|EGE39010.1| arginine--tRNA ligase [Actinomyces viscosus C505]
          Length = 561

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 194/563 (34%), Positives = 302/563 (53%), Gaps = 47/563 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  STN AM L++  G  P  +AEL+V R++    + SV +AG GF+N+ L
Sbjct: 35  VERPRNRDHGDWSTNVAMQLAKKAGTKPRDLAELLVPRLEALDGIASVEVAGPGFLNIRL 94

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  SIV +G  YGRN    G  +N+E+VSANPTGP+H+G  R A VGD+LA +
Sbjct: 95  DAASAGELARSIVEAGEAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           ++  G +VTREYY ND G QI+  A S+    +        + PE  Y G Y+  + +++
Sbjct: 155 LSACGAQVTREYYFNDHGTQIDRFARSLLASAR------GQETPEDGYGGAYISEIAQQV 208

Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            AD+ ++   +    P+ +   + +   V  M   ++ +L A     D+F  ED  H   
Sbjct: 209 TADELAAGRPDPATLPDAEATEVFRSRGVDLMFAAVKAELHAFRSDFDVFFHEDSLHTS- 267

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   I  L  +G + E      +   T            R+T  GDD DR L+KSDG
Sbjct: 268 -GAVERAIARLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388
           +  YFAADLAY+  K ERG D  IY++G+DH GY+ R+ A+ AA  +     + +L+ +L
Sbjct: 311 NAAYFAADLAYYLDKRERGADCAIYLLGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 370

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R+G+P++MSKRAG  +TL  +VD VG D+ R+ +       ++D D   +   + +
Sbjct: 371 VNLVRNGVPVRMSKRAGTIVTLEDLVDAVGVDAARYALARSSMDSMIDIDLDLLTSSTSD 430

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF------DTSELQLIVHL 502
           NPV+YVQYA+AR R++ R A +     D         P E+ F      D ++  L+  L
Sbjct: 431 NPVYYVQYAHARTRNVARNAAEHGVSRD---------PNEAPFEPGALDDPADTALLGVL 481

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P  +  A   +E +++A YL  LA+ +H  +   R  PR      +     + RL L
Sbjct: 482 AQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGATRVTPRGDDAVDSGH---VARLWL 538

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV  ++ +GL+++GV +P  M
Sbjct: 539 NDAVGQVLANGLDLLGVSAPERM 561


>gi|109894995|sp|Q74C63|SYR_GEOSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 561

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 302/569 (53%), Gaps = 52/569 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90
           IV+E+P    HG  +  AAM++++     P  IAE+I+  +   +  V+SV IAG GFIN
Sbjct: 30  IVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAEIIITHLNDRESLVESVEIAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +  S   ++L  I   G +YG++  G G KV +EFVSANPTGP+H+GH R A +GDT+
Sbjct: 90  FRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQVEFVSANPTGPLHIGHGRGAAIGDTI 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+A  G++VTRE+Y NDAG QI  LALSV  R    +       P   Y G Y+K V 
Sbjct: 150 CRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGVEPGGPLWPTDGYQGEYIKDVA 208

Query: 211 -----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                +E  D     +    +   +  ++ ++V  + +    DL+A ++  D++  E   
Sbjct: 209 RSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAYLRREQDQDLRAFDVGFDVYFLESSL 268

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + D++  +  +G+ YE                    L  R+T  GDD DR + 
Sbjct: 269 YA--EGRVDDVVQRIIAKGHAYE----------------QDGALWLRTTEFGDDKDRVMR 310

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383
           KSDGSYTYF  D+AY   K+ERGF  ++   G+DH   + R+ A   A+     K     
Sbjct: 311 KSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADHHSTITRVRAGLQALDAGIPKGWPEY 370

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + R G  +K+SKRAG ++TLR +VDEVG D+ RF  L RK    L FD    K
Sbjct: 371 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVGRDATRFFFLMRKPDSQLVFDIDLAK 430

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-------ESEFDTSEL 496
           +Q+ ENPV+YVQYA+AR  SIF  A D           + V+P        ES     EL
Sbjct: 431 QQTLENPVYYVQYAHARICSIFENAAD-----------KGVVPPTVDQASLESLGTPEEL 479

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L+ +P ++E + +  EP+++ +YL +LA  FH  ++  R       V   +  LT
Sbjct: 480 TLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNKNR-------VITEDADLT 532

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+H+ A++I +GL ++GV +P +M
Sbjct: 533 GARLLLLHSTATVIRNGLGLLGVSAPEKM 561


>gi|116671171|ref|YP_832104.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611280|gb|ABK04004.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 554

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 193/561 (34%), Positives = 310/561 (55%), Gaps = 39/561 (6%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + D + +ERP++  HG  +TN A+ LS+  G++P   A ++  R+     V +V IAG G
Sbjct: 30  VPDEVRVERPKNRDHGDWATNIALQLSKQAGVNPREFATVLSTRLATIDGVSAVDIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N+ +  +    +  +IV +G EYG N    G  VN+EFVSANPTGP+H+GH R A +G
Sbjct: 90  FLNITVDAAAAGALAKAIVEAGPEYGTNSALAGHVVNMEFVSANPTGPLHIGHTRWAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D++A ++  SG +VT EYYINDAG+Q+N  A SV  R           +PEG YPG Y+ 
Sbjct: 150 DSIARVLRASGAKVTAEYYINDAGSQMNVFARSVLSRLH------GRGVPEGGYPGEYIS 203

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G  +  ++  ++    +   LP+++  + +A MK I+D L    +  D++ SE + H 
Sbjct: 204 ELGHHVLTEH-PDIRELTDVAALPVIRGAAYKAQMKDIKDTLADFGVAFDVYFSEQELH- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   I   +  L  QG+V++                D   +  R+T  GDD DR ++++
Sbjct: 262 -DAGAIESAVARLREQGHVFD----------------DGGAVWLRTTDFGDDKDRVMIRA 304

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLC 386
           +G  TYFAAD AY+  K +RGFD  IY++G+DH GY+ RL+A+AAA  +  +A I VL+ 
Sbjct: 305 NGEPTYFAADAAYYLSKKDRGFDQKIYLLGADHHGYINRLKAIAAAAGDDPEANIEVLIG 364

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +LV +  +G   K+SKRAG+ I L+ ++  +G D+VR+ +        L  D   +K+ S
Sbjct: 365 QLVSV--NGA--KLSKRAGNIIELKDLISWLGKDAVRYSLARFPADSPLTLDPELLKKHS 420

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            ENPVFYVQYA+AR R   R A  +   ++  +  ++          +E +L+ +L  YP
Sbjct: 421 NENPVFYVQYAHARSRGTARNA--VAAGVERRVDGKDAFDASLLDHATENELLSYLGSYP 478

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN--RKLTMMRLQLVH 564
            ++  A   +EP+++A +L  +A  +H  +   R  P     Q +     +   RL L  
Sbjct: 479 SIVAKAAELREPHRVARHLEVIAGAYHRWYDACRVAP-----QGDEPITDVNRTRLWLND 533

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A + ++ +GL ++GV +P  M
Sbjct: 534 ATSQVLANGLELLGVSAPERM 554


>gi|148264350|ref|YP_001231056.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083535|sp|A5G3W5|SYR_GEOUR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146397850|gb|ABQ26483.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 561

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 197/569 (34%), Positives = 307/569 (53%), Gaps = 44/569 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF-IAGK 86
           +   IVIE+P    HG  +TN AM+L++     P  +AE++V+R++   D+ S   +AG 
Sbjct: 26  VFPSIVIEKPAHAEHGDFATNVAMLLAKAEKKAPRVVAEILVSRLQESADICSKLEVAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN Y+     R+ L +I  +  +YG++ IG+G K+ +EFVSANPTGP+H+GH R A +
Sbjct: 86  GFINFYVKDEAWRQTLIAIDRACADYGKSRIGEGKKIQVEFVSANPTGPLHIGHGRGAAI 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GDT+  L+A  G++VTRE+Y NDAG QI  LALSV  R    +  +D   P   Y G Y+
Sbjct: 146 GDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGIEPDDPRWPLDGYQGDYI 204

Query: 207 KHV-----GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           + V     G+E  +     +    + + L  ++ ++V  + +    DL A ++  D++  
Sbjct: 205 RDVARSYLGQETVEADDQHVTAAGDPQDLDAIRRFAVAYLRREQDQDLTAFDVHFDVYSL 264

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +  ++  L   G+ YE                    L  R+T  GDD D
Sbjct: 265 ESALYA--EGRVEAVVQRLIDSGHTYE----------------QDGALWLRTTTFGDDKD 306

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           R + K+DG YTYF  D+AY   K+ERGF  +I   G+DH   + R+ A   A++   A I
Sbjct: 307 RVMRKADGGYTYFVPDVAYHLSKWERGFTRVINEQGADHHSTITRVRAGLQALN---AGI 363

Query: 382 NV-----LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            V     +L ++V + R G  +K+SKRAG ++TLR ++DEVG D+ RF  + RK    L 
Sbjct: 364 PVGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFVMRKPDSQLV 423

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD    K+Q+ +NPV+YVQYA+AR  SIF  A     +  F L     +P E      E+
Sbjct: 424 FDIDLAKQQTLDNPVYYVQYAHARICSIFENAL----ERGFVLPAAESVPLERLVTLEEM 479

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            +I  LA +P ++E + +  EP+++ +YL +LA  FH  ++  R       V   + +LT
Sbjct: 480 TIIKTLASFPEILEGSALNFEPHRVTYYLQELAGQFHSFYNRNR-------VITEDAELT 532

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+  VA  + + L ++G+ +P +M
Sbjct: 533 AARLFLLKCVALTLKNALTVLGISAPEKM 561


>gi|297539933|ref|YP_003675702.1| arginyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297259280|gb|ADI31125.1| arginyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 551

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 194/562 (34%), Positives = 305/562 (54%), Gaps = 42/562 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++ERP+   HG  +TN A++L++PL  +P  IA  I+  +     +    IAG GFIN 
Sbjct: 24  ILLERPKSAEHGDFATNLALVLAKPLKQNPRAIAAQIIEALPASDYIAKTEIAGAGFINF 83

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+    + +++ I+ +G  YGRN IG G KV +EFVSANPTGP+HVGH R A VGD LA
Sbjct: 84  FLNAQSQQAVVTDILKAGENYGRNNIGSGQKVQLEFVSANPTGPLHVGHGRGAAVGDCLA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+  +G++VTRE+Y NDAGAQI+ L +SV  R  + +  +D+  PE  Y G Y+  +  
Sbjct: 144 RLLDANGWDVTREFYYNDAGAQIDNLTISVLARC-KGIPTDDASFPENGYRGDYIMDIAN 202

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQ----AMMKIIRD-DLKALNIQHDIFISEDDFH 266
              +K +    +        I  + +V+    A ++  +D DLKA  I+ D+F  E   +
Sbjct: 203 AFLNKETVTADDMQVTANGDITDEDAVRTFAVAYLRHEQDLDLKAFQIKFDVFSLESALY 262

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 + + +  L + G+ Y               D+D   L  ++T  GDD DR + K
Sbjct: 263 --SEGKVEETVQALIKSGHTY---------------DLD-GALWLKTTDFGDDKDRVMRK 304

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL 384
           S+G YTYF  D+AY   K++RGF  +I   G+DH   + R+ A   A+         + +
Sbjct: 305 SEGGYTYFVPDVAYHAEKWKRGFVRVINEQGADHHSTITRVRAGLQALDAGIPSGWPDYV 364

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + R G  +K+SKRAG ++TLR +++EVG D+ R+ +  R++   L FD    + 
Sbjct: 365 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRSDSQLVFDIDLARA 424

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLA 503
           Q+ +NPVFY+QYA+AR  S+  Q   +   L D DL P N        +  E  L+  L+
Sbjct: 425 QTNDNPVFYIQYAHARICSVLAQWGGVAAQLNDVDLSPLN--------NPHETALMQRLS 476

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            YP  + NA     P+ +A YL DLAS  H +++        +F+   +  + + RL L+
Sbjct: 477 SYPETVANAATELAPHVIANYLKDLASDLHSYYN------EYKFL-IEDETVKLARLSLI 529

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +GL ++GV +P +M
Sbjct: 530 SATQQVLKNGLGLLGVSAPEKM 551


>gi|54023014|ref|YP_117256.1| arginyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81375821|sp|Q5Z0Z9|SYR_NOCFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|54014522|dbj|BAD55892.1| putative arginyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 552

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 198/588 (33%), Positives = 310/588 (52%), Gaps = 46/588 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L D + +ERPR+  HG  +TN AM +++  G +P  
Sbjct: 4   ADLADLLRATAAKVLAERGLDPAVLPDEVTVERPRNPEHGDYATNLAMKVAKKAGTNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GF+N+ L+ +    +L  ++ +G  YG     +GTK+
Sbjct: 64  LAGWLAEALGAADGITSAEVAGPGFLNIRLAAAAQGAVLEQVLAAGSGYGTADTLRGTKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWASVGDALGRILAAQGADVTREYYFNDHGAQIDRFANSLV- 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                        P+  Y G Y+  + +++  ++  E    P ++   + +   V+ M  
Sbjct: 183 -----AAATGQPTPDDGYAGAYIGEIAEQIVAEHP-EAPTLPADQRHELFRAEGVELMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            I+  L       D++ +E   F  G    +   ++ L   G +YE              
Sbjct: 237 HIKRTLHEFGTDFDVYFNESTLFASG---AVEQAVETLKASGDLYE-------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                     S+  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH G
Sbjct: 280 --KDGAWWIASSEYGDDQDRVVIKSDGNAAYIAGDIAYFQNKRSRGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG  +KMSKRAG  +TL  +V+ +G D+ 
Sbjct: 338 YIGRLKAAAAAFGDDPATVEVLIGQMVNLVRDGQAVKMSKRAGTVVTLDDLVEAIGVDAA 397

Query: 423 RFMML-WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           R+ ++ W  NS + D D      Q  ENPV+YVQYA+AR  SI R A        FD   
Sbjct: 398 RYALVRWSVNSSV-DIDLNLWTSQKNENPVYYVQYAHARTASIGRNAA------AFDY-- 448

Query: 482 RNVIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            +V P  S+    E  +LI  + EYPRV+ +A   +EP+++A YL +LA  +H      +
Sbjct: 449 ASVTPDLSQLTAEEEGELIRTIGEYPRVVASAASLREPHRVARYLEELAGAYH----RFQ 504

Query: 541 ENPRLRFVQANN---RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N +LR +   +     L   RL LV+A   ++ +GL ++GV +P +M
Sbjct: 505 TNSKLRVLPLGDDPVSPLNAARLVLVNATRQVLANGLALLGVSAPEQM 552


>gi|51891157|ref|YP_073848.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81389886|sp|Q67TI9|SYR_SYMTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51854846|dbj|BAD39004.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 558

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/561 (34%), Positives = 311/561 (55%), Gaps = 44/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           + +E P+   HG  +TN AM+++R     P  IA+ IV  ++ +   ++S  IAG GFIN
Sbjct: 35  VFLETPKAREHGDFATNLAMVMARQEKKAPRVIAQAIVDHLQTEGTWIESAEIAGPGFIN 94

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L   ++ ++L +I   G +YG++  G   ++ +E+VSANPTGPM +   R    G +L
Sbjct: 95  LRLRQGWVHQVLPAIQAEGADYGKSDHGGKQRILLEYVSANPTGPMVLVQARAGAFGSSL 154

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A L+ ++GYE   E+Y+NDAG Q+  LA +V  R Q+ L     ++PEGYYPG  +    
Sbjct: 155 ARLLNWAGYECHTEFYVNDAGNQVKILARTVDLRAQE-LRGATVEIPEGYYPGEDVIDCA 213

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + L ++Y  + L  PEE+ L  ++ ++ +         L++  ++ D + SE    R   
Sbjct: 214 RALLEQYP-DFLEKPEEERLAFLERWAPEYFRSGHERVLRSYGVEFDRWFSERSL-REAG 271

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           +P R +++ L  +G  YE                    +  R+T  GDD DR L+KSDG 
Sbjct: 272 APAR-LVEWLKERGEAYE----------------KDGAVWMRTTAYGDDKDRVLVKSDGE 314

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYFAAD  Y K KY+RG+  +I ++G DH GY+ R++A+   +   +  + +L  ++VR
Sbjct: 315 YTYFAADACYHKDKYDRGYATLIDILGQDHHGYLGRMKAMVECLGHPRDSLEILFTQMVR 374

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L++DG   +MSKR G+++TL  ++++V  D+ R+  L R     +DFD      +S +NP
Sbjct: 375 LFKDGQEFRMSKRRGNYVTLEDLLEQVSVDAARYFFLMRSLDTHMDFDLDLANLKSSDNP 434

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAE 504
           VFYVQYA+AR  SI RQA++   +          +P  SE DT      SE++L+  LAE
Sbjct: 435 VFYVQYAHARICSILRQAREQGLE----------VPAASEVDTALLADESEVELMRKLAE 484

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P  I  A  A+E +++  YL +LA++FH  +S  R       V +++  L+  RL LV 
Sbjct: 485 FPEEIIGAADAREVHRIPRYLNELATLFHQFYSRCR-------VVSDDVPLSRARLLLVD 537

Query: 565 AVASIINSGLNIIGVESPNEM 585
              +++ + L I+GV +P  M
Sbjct: 538 CTRTVLANALGILGVSAPERM 558


>gi|15923597|ref|NP_371131.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156978936|ref|YP_001441195.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255005401|ref|ZP_05144002.2| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|21542255|sp|Q932F6|SYR_STAAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232846|sp|A7WZ56|SYR_STAA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14246375|dbj|BAB56769.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156721071|dbj|BAF77488.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 553

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/559 (34%), Positives = 302/559 (54%), Gaps = 41/559 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+   + +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETHFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 535 RITLKNALAMVGVSAPESM 553


>gi|240169522|ref|ZP_04748181.1| arginyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 550

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 198/591 (33%), Positives = 305/591 (51%), Gaps = 54/591 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + V +ERPR+  HG  ++N A+ L++ +G++P  
Sbjct: 4   ADLAELLKATAAAVLAEHGLDTSALPQTVLVERPRNPEHGDYASNLALQLAKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + S  +AG GFINL L  S   +I++S++ +G  +G + +  G K+
Sbjct: 64  LAGWLAAALTKADGIASAEVAGPGFINLRLETSAQAQIVNSVIDAGDHFGHSDLLAGQKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P   Y G Y+  +   + +K + + L+ P+ +     ++  V  M  
Sbjct: 184 AAK------GEPTPADGYAGSYITDIAAHVLEK-APDALSLPDPEMRETFREIGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +Y+      K   T    
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--TGRVDQAIARLRETGNIYQ------KDGAT---- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 285 ------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL++ AAA  E  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKSAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEALGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +IP     DT+ L+L+ H         + E+PRV+E A   +EP+++  YL DLA  +H 
Sbjct: 448 LIP-----DTAHLELLSHDKEGKLLRTIGEFPRVLETAAALREPHRVCRYLEDLAGDYHR 502

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P+          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 503 FYDSCRVLPQ---GDEQPTDLHRARLALCQATRQVIANGLAILGVTAPERM 550


>gi|269794308|ref|YP_003313763.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269096493|gb|ACZ20929.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 559

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/567 (33%), Positives = 295/567 (52%), Gaps = 50/567 (8%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           ++I++ERPR   HG  +TN A+ L++  G  P  +A+ +  R    P V SV +AG GF+
Sbjct: 32  EQILVERPRQREHGDWATNIALQLAKKAGTQPRALADDLAVRFAETPGVKSVAVAGPGFL 91

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++  +++  G  YGR +   G KVN+EFVSANPTGP+H+G  R A VGD+
Sbjct: 92  NITLDAAAAGELARTVIDQGAGYGRGVAEAGKKVNLEFVSANPTGPIHIGGVRWAAVGDS 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G EVTREYY ND GAQI+  + S+  R +        D PE  Y G Y++ +
Sbjct: 152 LARVLEAAGAEVTREYYFNDHGAQIDRFSRSLLARAKG------EDAPEDGYGGQYIQDI 205

Query: 210 GKELADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              +          + L  P+E+   + +   V  M   I+  L    +  D++  ED  
Sbjct: 206 ADAVLADVAAAGGPDPLTLPDEEAQEVFRSIGVDRMFTEIKAALHGFGVDFDVYFHEDTL 265

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  +   +   I  L   G+++E                       R+T  GDD DR ++
Sbjct: 266 H--ETGAVDRAIARLKDSGHMFEA----------------DGATWLRTTDFGDDKDRVVI 307

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVL 384
           KSDG   Y A D+AY+  K ERG D +I ++G+DH GYV R+ AV AA  ++    + +L
Sbjct: 308 KSDGQAAYIAGDIAYYLDKRERGADEVIIMLGADHHGYVGRMMAVCAAFGDQPGTNLQIL 367

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++V L +DG P++MSKRAG  +TL  +VD VG D+ R+ ++       LD D   + +
Sbjct: 368 IGQMVNLLKDGEPLRMSKRAGTVVTLEDLVDAVGVDAARYSLVRSSTDSSLDIDLDLLSK 427

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQL 498
            + ENPV+YVQYA+AR  ++ R A D            + + +E  FD S      E  L
Sbjct: 428 ATNENPVYYVQYAHARTANVARNAAD------------HGVRREDAFDPSLLTAETESAL 475

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  L E+PRVI  A   +EP+++A YL  LA  +H  ++  R  P       +  +    
Sbjct: 476 LGSLTEFPRVIAQAAELREPHRVARYLEALAGAYHKWYADVRVTPVGDEEIGDTHR---T 532

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   ++ +GL ++GV +P  M
Sbjct: 533 RLWLNDATRQVLANGLALLGVSAPERM 559


>gi|167036620|ref|YP_001664198.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115047|ref|YP_004185206.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855454|gb|ABY93862.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928138|gb|ADV78823.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 562

 Score =  328 bits (841), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/548 (35%), Positives = 305/548 (55%), Gaps = 36/548 (6%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98
           HG L+ N AM++++   + P  IAE+IV+  K+DP    ++ + IAG GFIN +L   +L
Sbjct: 47  HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KMDPSNTFIEKIEIAGPGFINFFLKDKFL 104

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L  +   G +YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD LA+++ ++G
Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAG 164

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y 
Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYQGEDIIDRAREFLEIYG 223

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  + P E     + DY ++  ++ I++DL    I++D++ SE   +  D   +  +I+
Sbjct: 224 DKYKDVPSEVRRKALIDYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L ++GY YE                    L F+ T+ G + D  L++++G  TY A+D+
Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDI 325

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           AY K K+  RGFD +I V G+DH G+V  ++    A+     +++V+L +LV+L   G  
Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           +KMSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA
Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYA 445

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI RQ ++    +D      + +      +  E +LI  LA +P  I  A     
Sbjct: 446 HARICSIIRQLEEEGVKID----NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKTLA 501

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ AV ++I + L+I+
Sbjct: 502 PHRITRYILDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDIL 554

Query: 578 GVESPNEM 585
            + +P  M
Sbjct: 555 KITAPERM 562


>gi|326390823|ref|ZP_08212375.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993082|gb|EGD51522.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 562

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/550 (36%), Positives = 307/550 (55%), Gaps = 40/550 (7%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98
           HG L+ N AM++++   + P  IAE+IV+  K+DP    ++ + IAG GFIN +L   +L
Sbjct: 47  HGDLAINTAMVMAKQAKMPPKKIAEIIVS--KMDPSNTFIERIEIAGPGFINFFLKDKFL 104

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L  +   G +YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++G
Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAG 164

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y 
Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYG 223

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  + P E+    + +Y ++  ++ I++DL    I++D++ SE   +  D   +  +I+
Sbjct: 224 DKYKDVPSEERRKALIEYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L ++GY YE                    L F+ T+ G + D  L++S+G  TY A+D+
Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDI 325

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           AY K K+  RGFD +I V G+DH G+V  ++    A+     +++V+L +LV+L   G  
Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           +KMSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA
Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYA 445

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNV--IPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           +AR  SI RQ ++    +D      N+  +      +  E +LI  LA +P  I  A   
Sbjct: 446 HARICSIIRQLEEEGVKID------NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKT 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ AV ++I + L+
Sbjct: 500 LAPHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALD 552

Query: 576 IIGVESPNEM 585
           I+ + +P  M
Sbjct: 553 ILKITAPERM 562


>gi|294792712|ref|ZP_06757859.1| arginine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294794463|ref|ZP_06759599.1| arginine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294454793|gb|EFG23166.1| arginine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294456611|gb|EFG24974.1| arginine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 577

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 203/580 (35%), Positives = 308/580 (53%), Gaps = 60/580 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +  D  ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G EYG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGTEYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++   + LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEADRVALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +   +  D + SE   H  D   I   ++ L   G VYE                    L
Sbjct: 271 RNFRVTFDNWFSERTVHESDE--IHHSVEALKALGKVYE----------------KDGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + KY+RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      ++ VLL ++V L+RDG  +K+SKR+GD +TL  +++EVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q ++    + F  +       E+
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGNY------SET 484

Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +F T     EL+LI  LAEYP  +  A   + P+++A YLYDLAS+FH  +  GR     
Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|149377307|ref|ZP_01895053.1| arginyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149358404|gb|EDM46880.1| arginyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 561

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/557 (34%), Positives = 308/557 (55%), Gaps = 40/557 (7%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           +D +HG  + N A++ S+  G  P  +AE +V R+     V+ V IAG GFIN ++S + 
Sbjct: 36  KDKSHGDYACNIALVASKAAGCPPRKLAEALVERLPDSSAVEKVEIAGPGFINFFMSTAS 95

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             +++++I+ +  +YGRN  GKG KV +EFVSANPTGP+HVGH R A +GD L+ L+  +
Sbjct: 96  AFEVVNTILDNAGQYGRNNNGKGEKVQVEFVSANPTGPLHVGHGRGAAIGDCLSRLLEAN 155

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----E 212
           GY+VTRE+Y NDAGAQIN LALSV  R  + L  +D + P   Y G Y+  V       E
Sbjct: 156 GYDVTREFYYNDAGAQINNLALSVQSRV-KGLTPDDENWPADGYRGDYITDVANAYLAGE 214

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                  E+    + +    +++++V  + +    DLKA  ++ D++  E   +  +   
Sbjct: 215 TVTADDREVTGKADPEDQQAIQEFAVAYLRREQDLDLKAFGVEFDVYFLESSLY--EDGK 272

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + + ++ L   GY YE                    +  ++T  GDD DR + K DG YT
Sbjct: 273 VEETVERLQENGYTYE----------------HDGAMWLKTTEFGDDKDRVMRKKDGGYT 316

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVR 390
           YF  D+AY   K++RGF  +I   G+DH   V R+ A   A+S    K   + +L ++V 
Sbjct: 317 YFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQALSASIPKGWPDYVLHQMVM 376

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + R G  +K+SKRAG ++T+R ++DEVG D+ RF +  R+    L FD    + Q+ ENP
Sbjct: 377 VTRSGQEVKISKRAGSYVTVRDLIDEVGRDATRFFLAARRVDSQLTFDIDLARSQTNENP 436

Query: 451 VFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           V+Y+QYA+AR  S+ R+ K+  +   L+  +   +++  + E D     L   LA+YP +
Sbjct: 437 VYYIQYAHARICSVLRKLKEEGVERGLNECVGDLSLLTLDEEKD-----LANQLAKYPEL 491

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           IE++   +EP+ L  YL DLA  FH +++  +       V   +  +   R+ L  AV  
Sbjct: 492 IESSAKLREPHHLTHYLRDLAGQFHTYYNAHK-------VLIEDTAIRDARVSLYLAVRQ 544

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL+++GV +P+EM
Sbjct: 545 VIANGLDLLGVSAPDEM 561


>gi|329901351|ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327549132|gb|EGF33727.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 553

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 215/587 (36%), Positives = 318/587 (54%), Gaps = 67/587 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           +V+ERPRD AHG +S N AM L++PL  +P  +A+ +VA +  DP     VD+V IAG G
Sbjct: 1   MVLERPRDPAHGDVSCNIAMQLAKPLKKNPRELAQQLVAALLADPARAGLVDAVEIAGPG 60

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  ++++ +++    +YGR  +G G KV +EFVSANPTGP+HVGH R A +G
Sbjct: 61  FINLRLALAARQEVVHTVLQEAADYGRGTLGTGRKVLLEFVSANPTGPLHVGHGRQAALG 120

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++L A  GY+V RE+Y NDAG QI TLA SV  R  +     D+D PE  Y G Y+ 
Sbjct: 121 DALSALFAVQGYDVMREFYYNDAGVQIATLAASVQAR-ARGFKPGDADWPEPAYNGDYIG 179

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK ++    + ++   +   L  ++ + V  + +    DL+A  ++ D +  
Sbjct: 180 DIALDFLAGKTVSAADCAPVIASGDVDDLDSIRQFGVAYLRREQDLDLQAFGVKFDNYYL 239

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   + GD   +   +D L + G  YE               +D   L  R+T  GDD D
Sbjct: 240 ESSLY-GD-GKVHAAVDALIKAGKTYE---------------LD-GALWLRTTDYGDDKD 281

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKA 379
           R + KSDG+YTYF  D+AY   K++RGF N I + GSDH G + R+ A   AV     K 
Sbjct: 282 RVMKKSDGTYTYFVPDVAYHIVKWQRGFGNAINIQGSDHHGTIARVRAGLQAVDLGIPKG 341

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----EV----------------GS 419
             + +L ++V + +DG  +K+SKRAG ++TLR +++    EV                G 
Sbjct: 342 YPDYVLHKMVTVMKDGEEVKISKRAGSYVTLRDLIEWSSGEVEVVTDAANDAPRDLTRGR 401

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FD 478
           D+VRF ++ RK      FD    + QS ENPV+YVQYA+AR  S+  Q       LD  D
Sbjct: 402 DAVRFFLISRKADTEFIFDVDLARAQSDENPVYYVQYAHARICSVLAQWGGDESVLDGVD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P    P+E+        L+  LA+YP  +E+A     P+++AFYL DLA   H +++ 
Sbjct: 462 LSPLTA-PREA-------SLLARLADYPEALEHALEELGPHQVAFYLRDLAGELHSYYNA 513

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V  ++    M RL L+ A   ++ +GL++IGV +P  M
Sbjct: 514 ER-------VLVDDMPTRMARLALMLATRQVLRNGLSLIGVSAPLRM 553


>gi|227495013|ref|ZP_03925329.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831465|gb|EEH63848.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 559

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/560 (34%), Positives = 302/560 (53%), Gaps = 40/560 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+ERPR+  HG  +TN AM L++  G++P  +A  I  R+     ++ V +AG GFIN+
Sbjct: 34  IVVERPRNREHGDWATNIAMRLAKAAGMNPRELAVNIAFRLAEKEGIEKVDVAGPGFINI 93

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L  +   ++  +I+ +   YG N    G  VN+EFVSANPTGP+H+G  R A VGDTLA
Sbjct: 94  TLDAATAGELARTILTAKESYGTNQSQTGKHVNLEFVSANPTGPIHLGGARWAAVGDTLA 153

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+  SG +VTREYY ND GAQI+  A S+  R +        + PE  Y G Y++ +  
Sbjct: 154 RLLEASGAKVTREYYFNDHGAQIDRFARSLVARAK------GEEAPEDGYGGQYIEDIAN 207

Query: 212 E-LADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
           + +AD   +   N    PE +     +   V+ M   I+  L   +++ D++  ED  H 
Sbjct: 208 QVMADAQEAGEPNPVTLPEAEATEAFRARGVELMFAEIKKKLAEFHVEFDVYFHEDHLHT 267

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + I+ L  +G +YE                       RST  GDD DR ++KS
Sbjct: 268 --TGAVAEAIEKLRDRGVIYEA----------------EGATWLRSTDFGDDKDRVIIKS 309

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLC 386
           DG   YFA D+AY+  K ERG D ++ ++G+DH GY+ R+ A+ AA  +K    + +L+ 
Sbjct: 310 DGDAAYFAGDIAYYLNKRERGADQVVIMLGADHHGYIGRMYAMCAAFGDKPGDNLELLIG 369

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +LV L  +G P++MSKRAG  +TL  +V+ VG D+ R+ ++     + +D D   +   S
Sbjct: 370 QLVNLLSNGEPLRMSKRAGTIVTLDDLVEAVGVDAARYALVRSSIDQAIDIDLDLLASHS 429

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +NPV+YVQYA+AR  ++ R A +    +D    P      E+    ++ QL+  LA++P
Sbjct: 430 NDNPVYYVQYAHARTCNVSRNAAEHGVSMDAGFAP------EALDHAADAQLLGALAQFP 483

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL-RFVQANNRKLTMMRLQLVHA 565
            ++  A   +EP+++A YL  LA+ +H  +   R  PR    V+  +    + RL L  A
Sbjct: 484 AMVAQAAELREPHRVARYLESLAASYHTWYGQCRVTPRADELVETGH----VARLWLNEA 539

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  ++ +GL ++GV +P  +
Sbjct: 540 VKQVLANGLALLGVSAPERL 559


>gi|313899150|ref|ZP_07832673.1| arginine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956043|gb|EFR37688.1| arginine--tRNA ligase [Clostridium sp. HGF2]
          Length = 509

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 188/507 (37%), Positives = 283/507 (55%), Gaps = 31/507 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           IVIE P+D +HG  STN AM L+R L  +P  IAE +V  + K   D++S  IAG GFIN
Sbjct: 29  IVIEIPKDKSHGDYSTNVAMQLTRVLKNNPRKIAEAVVEALDKAAADIESCEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +  + L +I++ ++     YG +  G+G KVN+E+VSANPTG +H+GH R A  GD++
Sbjct: 89  FTIKNTSLAQIITRVLQEQDNYGNSNDGQGLKVNVEYVSANPTGDLHLGHARGAAWGDSI 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             LM  SGY+V REYY+NDAG QI  L  S+  RY++ L   D DLPE  Y G  +K++ 
Sbjct: 149 TRLMKASGYDVCREYYVNDAGNQIVNLGKSLQARYREHL-GLDFDLPEDGYHGEDVKNIA 207

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             +A++Y    + + +   L   K+  +   +  IR DL    +  D++ SE      D 
Sbjct: 208 IAIAEEYKDAYVEYSDAN-LKFFKEKGIAFELDKIRRDLDNFRVHFDVWSSEQSIR--DE 264

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   ++ L  +G  YE                    L F +T  GDD DR L K DGS
Sbjct: 265 GKVEKALEVLHEKGLTYE----------------KDGALWFATTRFGDDKDRVLRKKDGS 308

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY   D+AY K K +RG+D ++ ++G+DH GY+ RL+A   A+     ++ V + ++VR
Sbjct: 309 YTYLVPDIAYHKDKLDRGYDLLVDLLGADHHGYIPRLKASIEALGNNPDKLQVDIIQMVR 368

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ +T+R + +EVG D+VR+  + R     LDFD    ++QS +NP
Sbjct: 369 LVENGEEVKMSKRLGNAVTIRELCEEVGVDAVRYFFVQRAVDTHLDFDLGLARKQSNDNP 428

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y QYA+AR  SI RQA +I     F+L               E+ L+ ++ E+  V+ 
Sbjct: 429 VYYAQYAHARICSILRQASEIAEAKSFELLTH----------EKEIALMKYINEFTNVVS 478

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWS 537
           +A  ++ P+K+  Y+  LA  FH  ++
Sbjct: 479 DAARSRAPHKVCNYIQKLAQHFHSFYN 505


>gi|215410929|ref|ZP_03419737.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|298524796|ref|ZP_07012205.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|298494590|gb|EFI29884.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
          Length = 550

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  L  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 64  LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+ 
Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          P+  Y G Y+ ++ +++  K + + L+ P+ +     +   V  M 
Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L       D++  ED  H G    + + I  L   G +YE      K   T   
Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH G
Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ 
Sbjct: 338 YIARLKAAAAAFGDDSATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           
Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446

Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +IP     DT+ L+L+ H         L E+PRV+E A   +EP+++  YL DLA  +H
Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  P+          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|325917527|ref|ZP_08179730.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536243|gb|EGD08036.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 555

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/562 (35%), Positives = 305/562 (54%), Gaps = 38/562 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
            V+ERP+   HG  +TNAAM+L++    +P  +A+ +VA +    DV  V IAG GFIN 
Sbjct: 24  FVVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVEIAGPGFINF 83

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA
Sbjct: 84  HLAPTAYQREVAHVIKQGNDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V  
Sbjct: 144 RVLEANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVAN 202

Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   +
Sbjct: 203 AYLAGDTVDLEGHLVSGSKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLY 262

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +     + + +  L   G+ YE                +   L  +ST  GDD DR + K
Sbjct: 263 K--DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRK 304

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVL 384
           SDG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +
Sbjct: 305 SDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYV 364

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + RDG  +K+ KRAG +ITLR +++E  +D+VR+ ++ RK    L FD    + 
Sbjct: 365 LHQMVTVMRDGEEVKLGKRAGGYITLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARA 424

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLA 503
           QS +NPVFYVQYA+AR  S+ RQA+    +  F     N + Q +  D    L +++ L+
Sbjct: 425 QSNDNPVFYVQYAHARVCSVLRQAQ----EKGFKYEQANGLAQLARLDDEHSLNVMLELS 480

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            YP V++ A  A EPY++A YL +LA  FH  W H   N +L    A  R     +L L 
Sbjct: 481 RYPEVVDIAGQALEPYQIAQYLRELAHAFH-TWYH---NTKLLVDDAAERD---AKLTLA 533

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +GL ++GV +P +M
Sbjct: 534 VATQQVLANGLELLGVSAPEKM 555


>gi|84494550|ref|ZP_00993669.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84384043|gb|EAP99923.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 548

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/583 (33%), Positives = 315/583 (54%), Gaps = 42/583 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + SS ++  L E          +   + +ERP++  HG  STN A+ L++  G+ P  +A
Sbjct: 5   ELSSAIRAALLEATAAGDFTVDVPGEVRVERPKNRGHGDWSTNIALQLAKTAGMPPRDLA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +  R++    +  V +AG GF+N+ L  +   ++  +IV SG  YG+N    G  +N+
Sbjct: 65  TRLAERLRAMDGIAQVDVAGPGFLNIGLDAASAGELARNIVESGTAYGKNDSEAGHTINL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF+SANPTGP+H+GH R A +GD++  L+  SG +VT EYYINDAGAQ++  ALSV    
Sbjct: 125 EFISANPTGPLHIGHTRWAALGDSMRRLLTASGADVTAEYYINDAGAQMDKFALSVLAGA 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +          PEG YPG Y+  + K + ++   ++L+ PE++ + + +  +  A +  I
Sbjct: 185 KG------QPTPEGGYPGAYIGDLAKAVVEQ-RPDVLDLPEDEAIAVARPLAYTAQLAEI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L+   +  D++ SE + H G    +   ++ L  QG+V                D  
Sbjct: 238 QQTLERFGVFFDVWFSEQELHDG--GAVEKAVERLREQGHV----------------DDK 279

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  R+T   DD DR L+++DG  TYFAAD AY+  K +RGF   IY++G+DH GY+ 
Sbjct: 280 DGAVWLRTTDFTDDKDRVLIRADGVPTYFAADAAYYLSKKDRGFTEKIYLLGADHHGYIG 339

Query: 366 RLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           RL+A+AA A  + +  I+V + +LV L       K+SKRAG+ I L  ++D +G D+VR+
Sbjct: 340 RLKAIAACAGDDPEVNIDVRIGQLVNLN----GAKLSKRAGNIIELNDLLDWIGKDAVRY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +        L  D  ++++Q+ +NPVFYVQYA+AR  ++ R A +     D    P  +
Sbjct: 396 NLARYPADSPLSLDGEELRKQTNDNPVFYVQYAHARTANVSRLAGEDGVRRDDGFDPALL 455

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E  L+  L ++PRV+  A   +EP+++A YL DLA  +H  W    +  R
Sbjct: 456 T------DATEATLLAILGDFPRVVAQAAQLREPHRVARYLEDLAGRYH-KWY---DTCR 505

Query: 545 LRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +R + A      L   RL L  A   ++ +GL+++GV +P  M
Sbjct: 506 VRPMNAEEEVTDLHRTRLWLNDATRQVLANGLDLLGVSAPERM 548


>gi|319785770|ref|YP_004145245.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464282|gb|ADV26014.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 562

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/567 (34%), Positives = 301/567 (53%), Gaps = 50/567 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           VIERP+   HG  +TNAAM+L++    +P  +A+ +V  +    DV    IAG GFIN +
Sbjct: 32  VIERPKTREHGDFATNAAMLLAKAARTNPRAVAQALVEAMPASDDVARAEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+    ++ ++ ++  G EYGRN  G+G    +E+VSANPTGP+HVGH R A +GD +A 
Sbjct: 92  LAAGAWQREVAGVLRHGGEYGRNTTGQGRTAGVEYVSANPTGPLHVGHGRAAAIGDCIAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++  +G++V RE+Y NDAG QI  LA S   R  + L   D++ P   Y G Y++ V   
Sbjct: 152 VLDANGWKVKREFYYNDAGVQIENLARSTQARL-RGLKPGDAEWPAEAYNGDYIQDV--- 207

Query: 213 LADKY---------SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            AD Y            +    + + +  ++ ++V  +      DL A  ++ DI+  E 
Sbjct: 208 -ADAYLRGDTVEIEGHAVTASGDVEDIDSIRRFAVAYLRNEQNQDLAAFGVEFDIYFLES 266

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +R     + + +  L  +G+ YE                +   L  RST  GDD DR 
Sbjct: 267 SLYR--DGKVEETVRELGAKGHTYE----------------EGGALWLRSTDFGDDKDRV 308

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQI 381
           + KSDG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  V   K   
Sbjct: 309 MRKSDGTYTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQALDVGIPKGWP 368

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
             +L ++V + R G  +K+SKRAG ++TLR +++E G D+ R+ ++ RK    L FD   
Sbjct: 369 EYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLIEEAGRDATRWFLIARKPDSQLVFDIDL 428

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            ++QS +NPVFYVQYA+AR  ++FRQ  +     D      N+   +   D   L L+V 
Sbjct: 429 ARQQSNDNPVFYVQYAHARVAALFRQGAEKGYAFDQANGLANLARLD---DDGSLTLVVE 485

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMM 558
           L+ YP V+E A  + EP+ +A YL +LA  FH  +++     E P LR            
Sbjct: 486 LSRYPEVVEAAGQSLEPHLVAQYLRELAYAFHTWYANTPVLVEEPALRDA---------- 535

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  AV  ++ +GL ++GV +P  M
Sbjct: 536 RLALAQAVQQVLANGLGLLGVSAPERM 562


>gi|269216290|ref|ZP_06160144.1| arginine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130549|gb|EEZ61627.1| arginine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 601

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/566 (34%), Positives = 304/566 (53%), Gaps = 36/566 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++ERPRD  HG  ST  A+  ++    +P  IA+ IV  +     V+ V IAG GFIN 
Sbjct: 60  ILLERPRDVGHGDWSTPVALRCAKAAHKNPREIAQTIVDALPEADFVEQVEIAGPGFINF 119

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           YL    L+ +++ +   G +YG+  I +G  KV IE++S+NPTGPMHVGH R A +G  +
Sbjct: 120 YLKDGALQNVIADVRAQGADYGKGEIPEGMRKVLIEYISSNPTGPMHVGHGRWAALGSAM 179

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A LM  +GYEV  E+YIND G Q++    S+  RY   L  +++++PEG Y G Y+  + 
Sbjct: 180 AKLMQHAGYEVDEEFYINDHGVQMDKFGQSIVARYLTQL-GHETEVPEGGYNGGYVNDIA 238

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + L ++     +N  E + +   +++   A+++ IR            + SE + +  + 
Sbjct: 239 RALIERDGDRWVNADEHERMVEFREFGYAALLENIRKVCDEFGTVFQYWQSERELYVPNE 298

Query: 271 -----SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                SP+   +  L   G VY               D D   + FRS+  GD+ DR ++
Sbjct: 299 KWDGMSPVDYCLSKLRENGDVY---------------DKD-GAVWFRSSKYGDEKDRVVI 342

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           KSDG YTYFA+D+ Y   K  RG+D +I + G+DH GY+ R+ AV AA+    A + V L
Sbjct: 343 KSDGEYTYFASDVGYHYIKKLRGYDKLIDIWGADHHGYIPRVAAVLAAMGYPGA-LEVPL 401

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +LV L+R G P++MSKR G+ IT   +++EVG D+ R+ ML R   + +DFD  + K+Q
Sbjct: 402 GQLVNLFRGGKPVRMSKRTGEMITFEELIEEVGVDATRWKMLERSTDQPIDFDIEEAKKQ 461

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPD--LDFDLFPRNVIPQESEF----DTSELQLI 499
              NPV+YVQYA+AR  S+ R A     +  LD        IP + +     + SEL L+
Sbjct: 462 DASNPVYYVQYAHARICSLLRNAAGHSGEDNLDMSAVASECIPADVDLSLLTEESELALM 521

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             ++E+  ++  A   + P++L  Y  +LA +FH  +++         ++A +  L   R
Sbjct: 522 RKMSEFGDLVALAARDRAPFRLTHYAQELAGMFHQFYTN------CPVLKAEDESLKQAR 575

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++   L I+G+ +P  M
Sbjct: 576 LALADATRIVLEIALGIMGISAPQRM 601


>gi|148822510|ref|YP_001287264.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|253799662|ref|YP_003032663.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435]
 gi|254550299|ref|ZP_05140746.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289554918|ref|ZP_06444128.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605]
 gi|297633842|ref|ZP_06951622.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297730829|ref|ZP_06959947.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|313658161|ref|ZP_07815041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|148721037|gb|ABR05662.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis F11]
 gi|253321165|gb|ACT25768.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435]
 gi|289439550|gb|EFD22043.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605]
 gi|328459408|gb|AEB04831.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 4207]
          Length = 550

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  L  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 64  LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+ 
Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSL- 181

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                +        P+  Y G Y+ ++ +++  K + + L+ P+ +     +   V  M 
Sbjct: 182 -----SAAAKGEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L       D++  ED  H G    + + I  L   G +YE      K   T   
Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH G
Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ 
Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           
Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446

Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +IP     DT+ L+L+ H         L E+PRV+E A   +EP+++  YL DLA  +H
Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  P+          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|326902914|gb|EGE49847.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis W-148]
          Length = 550

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  L  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 64  LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLTGRK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+ 
Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          P+  Y G Y+ ++ +++  K + + L+ P+ +     +   V  M 
Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L       D++  ED  H G    + + I  L   G +YE      K   T   
Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH G
Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ 
Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           
Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446

Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +IP     DT+ L+L+ H         L E+PRV+E A   +EP+++  YL DLA  +H
Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  P+          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|15608432|ref|NP_215808.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15840742|ref|NP_335779.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792485|ref|NP_854978.1| arginyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121637221|ref|YP_977444.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661080|ref|YP_001282603.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|167969617|ref|ZP_02551894.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215403132|ref|ZP_03415313.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215430177|ref|ZP_03428096.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445469|ref|ZP_03432221.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|219557191|ref|ZP_03536267.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224989696|ref|YP_002644383.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254364189|ref|ZP_04980235.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260186229|ref|ZP_05763703.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200343|ref|ZP_05767834.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204548|ref|ZP_05772039.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289442731|ref|ZP_06432475.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289446887|ref|ZP_06436631.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A]
 gi|289569302|ref|ZP_06449529.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17]
 gi|289573955|ref|ZP_06454182.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85]
 gi|289745038|ref|ZP_06504416.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289753369|ref|ZP_06512747.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289757392|ref|ZP_06516770.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|294994847|ref|ZP_06800538.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|306775461|ref|ZP_07413798.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001]
 gi|306971571|ref|ZP_07484232.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010]
 gi|307079285|ref|ZP_07488455.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011]
 gi|307083854|ref|ZP_07492967.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012]
 gi|54039682|sp|P67570|SYR_MYCBO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|54042043|sp|P67569|SYR_MYCTU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232808|sp|A1KI80|SYR_MYCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232811|sp|A5U1Z1|SYR_MYCTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782976|sp|C1AMT6|SYR_MYCBT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1322416|emb|CAA97757.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA
           ligase) [Mycobacterium tuberculosis H37Rv]
 gi|13880933|gb|AAK45593.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618074|emb|CAD94185.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA
           ligase) [Mycobacterium bovis AF2122/97]
 gi|121492868|emb|CAL71339.1| Probable arginyl-tRNA synthetase argS [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134149703|gb|EBA41748.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505232|gb|ABQ73041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|224772809|dbj|BAH25615.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289415650|gb|EFD12890.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289419845|gb|EFD17046.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A]
 gi|289538386|gb|EFD42964.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85]
 gi|289543056|gb|EFD46704.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17]
 gi|289685566|gb|EFD53054.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289693956|gb|EFD61385.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289712956|gb|EFD76968.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|308216081|gb|EFO75480.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001]
 gi|308358941|gb|EFP47792.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010]
 gi|308362849|gb|EFP51700.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011]
 gi|308366489|gb|EFP55340.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012]
 gi|323720249|gb|EGB29348.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CDC1551A]
          Length = 550

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  L  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 64  LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+ 
Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          P+  Y G Y+ ++ +++  K + + L+ P+ +     +   V  M 
Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L       D++  ED  H G    + + I  L   G +YE      K   T   
Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH G
Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ 
Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           
Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446

Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +IP     DT+ L+L+ H         L E+PRV+E A   +EP+++  YL DLA  +H
Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  P+          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|307265113|ref|ZP_07546673.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919911|gb|EFN50125.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 562

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 198/550 (36%), Positives = 308/550 (56%), Gaps = 40/550 (7%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98
           HG L+ N AM++++   + P  IAE+IV+  K+DP    ++ + IAG GFIN +L   +L
Sbjct: 47  HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KMDPSNTFIERIEIAGPGFINFFLKDKFL 104

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L  +   G +YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++G
Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAG 164

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y 
Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYG 223

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  + P E+    + +Y ++  ++ I++DL    I++D++ SE   +  D   +  +I+
Sbjct: 224 DKYKDAPSEERRRALIEYGLKENLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVHKVIE 281

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +L ++GY YE                    L F+ T+ G + D  L++S+G  TY A+D+
Sbjct: 282 DLKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGIPTYLASDI 325

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           AY K K+  RGFD +I V G+DH G+V  ++    A+     +++V+L +LV+L   G  
Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA
Sbjct: 386 VRMSKRTGRMVTLRDLIDEVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYA 445

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNV--IPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           +AR  SI RQ ++    +D      N+  +      +  E +LI  LA +P  I  A   
Sbjct: 446 HARICSIIRQLEEEGVKID------NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKT 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ AV ++I + L+
Sbjct: 500 LAPHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALD 552

Query: 576 IIGVESPNEM 585
           I+ + +P  M
Sbjct: 553 ILKITAPERM 562


>gi|329945378|ref|ZP_08293141.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328529000|gb|EGF55931.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 570

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 193/557 (34%), Positives = 300/557 (53%), Gaps = 35/557 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  STN AM L++  G  P  +AEL+V R++    V SV +AG GF+N+ L
Sbjct: 44  VERPRNRDHGDWSTNVAMQLAKKAGTRPRDLAELLVPRLEALDGVASVEVAGPGFLNIRL 103

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  SIV +G  YGRN    G  +N+E+VSANPTGP+H+G  R A VGD+LA +
Sbjct: 104 DAASAGELARSIVEAGEAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 163

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           ++  G  VTREYY ND G QI+  A S+    +        ++PE  Y G Y+  + +++
Sbjct: 164 LSACGARVTREYYFNDHGTQIDRFASSLLASARG------QEIPEDGYGGAYIGEIAQQV 217

Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            AD+ ++   +    P+ +   + +   V  M   ++ +L A     D+F  ED  H   
Sbjct: 218 TADELAAGRPDPATLPDAEAAEVFRARGVDLMFAAVKAELHAFRSDFDVFFHEDSLHT-- 275

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   I  L  +G + E      +   T            R+T  GDD DR L+KSDG
Sbjct: 276 SGAVERAIARLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 319

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388
           +  YFAADLAY+  K ERG D  +Y+ G+DH GY+ R+ A+ AA  +     + +L+ +L
Sbjct: 320 NAAYFAADLAYYLDKRERGTDCALYLFGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 379

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R+G+P++MSKRAG  +TL  +VD VG D+ R+ +       ++D D   +   + +
Sbjct: 380 VNLVRNGVPVRMSKRAGTVVTLEDLVDAVGVDAARYALARSSMDSMIDIDLDLLASSTSD 439

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA+AR R++ R A +     D  + P      +   DT+ L +   LA++P  
Sbjct: 440 NPVYYVQYAHARTRNVARNAAEHGVSRDPKVAPFEPAALDDPADTALLGV---LAQFPAT 496

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   +E +++A YL  LA+ +H  +   R  PR     ++     + RL L  AV  
Sbjct: 497 VAQAASLREQHRVARYLEQLAAAYHTWYGATRVTPRGDDAVSSGH---VARLWLNDAVGQ 553

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL ++GV +P  M
Sbjct: 554 VLANGLGLLGVTAPERM 570


>gi|254231550|ref|ZP_04924877.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis C]
 gi|124600609|gb|EAY59619.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis C]
          Length = 619

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 73  ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 132

Query: 64  IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  L  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 133 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 191

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+ 
Sbjct: 192 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 251

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          P+  Y G Y+ ++ +++  K + + L+ P+ +     +   V  M 
Sbjct: 252 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 304

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L       D++  ED  H G    + + I  L   G +YE      K   T   
Sbjct: 305 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 353

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH G
Sbjct: 354 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 406

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ 
Sbjct: 407 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 466

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           
Sbjct: 467 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 515

Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +IP     DT+ L+L+ H         L E+PRV+E A   +EP+++  YL DLA  +H
Sbjct: 516 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 570

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  P+          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 571 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 619


>gi|154509454|ref|ZP_02045096.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC
           17982]
 gi|293189483|ref|ZP_06608203.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|153799088|gb|EDN81508.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821573|gb|EFF80512.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 559

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 193/572 (33%), Positives = 310/572 (54%), Gaps = 41/572 (7%)

Query: 21  KIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
           +I ++  ++ D + +ERPR   HG  +TN AM L +  G+ P   A+++   +     +D
Sbjct: 22  RISIDPSLVPDPVTVERPRVREHGDWATNVAMQLGKKAGMAPREFAQILADDLAAADGID 81

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           SV +AG GFIN+ L      ++  +IV +G  YGRN    G  +N+E+VSANPTGP+H+G
Sbjct: 82  SVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLSGRSINLEYVSANPTGPVHLG 141

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
             R A VGD+LA LMA SG  VTREYY ND G+QI+  + S++ R          ++PE 
Sbjct: 142 GARWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDRFSHSLYARAM------GREVPED 195

Query: 200 YYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            Y G Y+  +  ++ AD  ++   + +  PEE+ + + +   V+ M   I++ L +    
Sbjct: 196 GYGGQYIADIADQVRADARAAGEPDPITLPEEEAIEVFRARGVELMFAEIKERLHSFRAD 255

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D+F  E+  H      +   I+ L  +G +++                +   +  R+T 
Sbjct: 256 FDVFFHEESLHT--SGAVAAAIERLRERGEIFD----------------EDGAVWLRTTT 297

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GDD DR L+KSDG   YFA D+AY+  K ERG D  IY++G+DH GY+ R+ A+ AA  
Sbjct: 298 YGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADVAIYLLGADHHGYIARMMAMCAAFG 357

Query: 376 EKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +K  + + +L+ +LV L +DG P++MSKRAG  +TL  +VD VG D+ R+ ++       
Sbjct: 358 DKPGENLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAVGVDAARYALVRVSMDTQ 417

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +D D   + + S +NPV+YVQYA+ R  ++ R A +     D    P  +   +SE D +
Sbjct: 418 VDIDLDLLSQHSNDNPVYYVQYAHVRACNVARNAAEHGVTRDAGFDPAAL---DSEADEA 474

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNR 553
            L  +    ++P  +  AT  +EP+++  YL  LA+ +H  +   R  PR    V+  + 
Sbjct: 475 LLAALA---QFPAQVAQATELREPHRITRYLESLAATYHAWYGQCRVTPRGDDPVEPGH- 530

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 531 ---IARLWLNDAVTQVLRTGLGLLGVSAPERM 559


>gi|317123140|ref|YP_004103143.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593120|gb|ADU52416.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 566

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 193/557 (34%), Positives = 297/557 (53%), Gaps = 37/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E PRD  HG  ++NAA++L+   G  P  +A +    +     +  V +AG GF+N 
Sbjct: 44  VQVEVPRDPRHGDFASNAALVLAGRAGRPPREVAAVFQRHLPGGAWLRQVEVAGPGFLNF 103

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           YL+ ++ ++ + +I+ +G  +G    G G KV +EFVSANPTGP+ V + R A +GD LA
Sbjct: 104 YLADAWWKEGVRAILQAGDAFGATDAGAGRKVQVEFVSANPTGPLGVVNARAAALGDALA 163

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++  +GY V +E+Y+NDAG QI  LA SV  R +Q L   ++++PEG YPG YL  + +
Sbjct: 164 RVLEAAGYRVEKEFYLNDAGNQIRKLAQSVEARMRQEL-GQEAEIPEGGYPGAYLIDIAR 222

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L       LL+ PEE+    +  ++V++++  +R  L    ++ D++  E    R +  
Sbjct: 223 DLLAAEGPGLLDRPEEQRWERMARFAVESLVAQMRTQLARFGVEFDVWYPESRV-RAEGY 281

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           P R +++ L ++  VYE                    +  RS+ VGDD DR L++ DG Y
Sbjct: 282 PER-VLERLRQRDMVYE----------------HDGAVWLRSSAVGDDKDRVLVRRDGEY 324

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY   D+AY   K+ERGF   I + G DH G+V  +EA   A+        VLL ++V L
Sbjct: 325 TYTLVDIAYHLTKWERGFQQAIDIWGQDHHGHVVPMEAALRALGLPDGWFEVLLTQMVHL 384

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            R G  ++MSKR G+ +T+   +DEV  D+ R+  L R     LDFD      +S ENPV
Sbjct: 385 VRGGQAVRMSKRRGELVTMAEFLDEVDVDAARYFFLMRSPDTHLDFDLDLANLRSNENPV 444

Query: 452 FYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +YVQYA+AR   I RQA+    + PD   DL P          D +E  L   L + P  
Sbjct: 445 YYVQYAHARACGILRQAEAEAGLRPDPAADLSPLG--------DPAERDLARRLLDLPGE 496

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A  A+EP++L +YL D+A++FH  ++  R       V      +   RL LV A   
Sbjct: 497 VAAAAAAREPHRLTYYLKDVATLFHQFYTRCR-------VLGEEEPVARARLALVDATRR 549

Query: 569 IINSGLNIIGVESPNEM 585
           ++   L ++GV +P  M
Sbjct: 550 VLARTLGLLGVTAPERM 566


>gi|256751682|ref|ZP_05492557.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749491|gb|EEU62520.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 562

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 198/550 (36%), Positives = 307/550 (55%), Gaps = 40/550 (7%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98
           HG L+ N AM++++   + P  IAE+IV+  K+DP    ++ + IAG GFIN +L   +L
Sbjct: 47  HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KMDPSNTFIERIEIAGPGFINFFLKDKFL 104

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L  +   G +YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++G
Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAG 164

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y 
Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYG 223

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  + P E+    + +Y ++  ++ I++DL    I++D++ SE   +  D   +  +I+
Sbjct: 224 DKYKDVPSEERRKALIEYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L ++GY YE                    L F+ T+ G + D  L++S+G  TY A+D+
Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDI 325

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           AY K K+  RGFD +I V G+DH G+V  ++    A+     +++V+L +LV+L   G  
Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           +KMSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA
Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYA 445

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNV--IPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           +AR  SI RQ ++    ++      N+  +      +  E +LI  LA +P  I  A   
Sbjct: 446 HARICSIIRQLEEEGVKIE------NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKT 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ AV ++I + L+
Sbjct: 500 LAPHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALD 552

Query: 576 IIGVESPNEM 585
           I+ + +P  M
Sbjct: 553 ILKITAPERM 562


>gi|254516119|ref|ZP_05128179.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675841|gb|EED32207.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 560

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 196/565 (34%), Positives = 298/565 (52%), Gaps = 44/565 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ER RD AHG L++N A+  ++ L + P  +A+ I   +  +  +D   IAG GFIN 
Sbjct: 29  IQVERTRDAAHGDLASNIALAAAKLLKMPPRELAQAICDALPENTAIDRTEIAGPGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LS      ++  ++  G ++G N  G G KV +EFVSANPTGP+HVGH R A VGDTLA
Sbjct: 89  FLSNDSQAAVVQDVLRQGAKFGHNNSGTGRKVQVEFVSANPTGPLHVGHGRGAAVGDTLA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G+EV RE+Y NDAGAQIN L LSV  R  + L  +D   P+  Y G Y+  + +
Sbjct: 149 RILDACGWEVVREFYYNDAGAQINNLGLSVQARC-KGLTPDDEGWPDDGYRGDYITELAQ 207

Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                E  +     +    +   L  +++++V  + +    DL++  +  DIF  E   +
Sbjct: 208 AYLAGESVEASDKSVTAAGDADDLDAIREFAVAWLRREQDLDLQSFGVAFDIFFLESSLY 267

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   ++ L   G  Y                +    L  R+T  GDD DR + K
Sbjct: 268 --ESGEVESTVERLVESGNTY----------------VQDDALWLRTTSFGDDKDRVMRK 309

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INVL 384
            DG YTYF  D+AY   K+ RGF+ +I   G+DH   V R+ A   A+ E   Q     +
Sbjct: 310 QDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHHSTVTRVRAGLQALGEGIPQGWPEYV 369

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + RDG  +K+SKRAG ++TLR ++ EVG D+ R+ ++ R  +  L FD      
Sbjct: 370 LHQMVTVMRDGQEVKLSKRAGSYLTLRDLITEVGRDATRYFLVARSPNSQLTFDIDLALS 429

Query: 445 QSKENPVFYVQYAYARCRSIFR----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           QS +NPVFY+QYA+AR  S+ R    Q   +  DLD     R V PQ       E++++ 
Sbjct: 430 QSNDNPVFYIQYAHARVCSVRRKFLEQGLPVDLDLDTVALDRLVEPQ-------EIEVLK 482

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            LA +P ++  A  + EP ++A YL +LA  FH +++  +       V  ++ +L   RL
Sbjct: 483 QLARFPEIVARAGTSAEPQQIANYLRELAGEFHAYYNAHK-------VLIDDEELRSARL 535

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  AV  +I +GL ++GV +P  M
Sbjct: 536 ALTTAVGQVIANGLELLGVSAPESM 560


>gi|167039271|ref|YP_001662256.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913911|ref|ZP_07131228.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725404|ref|YP_003905155.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166853511|gb|ABY91920.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890596|gb|EFK85741.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582465|gb|ADN55864.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 562

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 197/548 (35%), Positives = 306/548 (55%), Gaps = 36/548 (6%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98
           HG L+ N AM++++   + P  IAE+IV+  K+DP    ++ + IAG GFIN +L   +L
Sbjct: 47  HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KVDPSNTFIEKIEIAGPGFINFFLKDKFL 104

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L  +   G +YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD LA+++ ++G
Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAG 164

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+VTRE+YINDAG QI     S+  RY Q L    +++PEG Y G  +    +E  + Y 
Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYQGEDIIDRAREFLEIYG 223

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  + P E     + DY ++  ++ I++DL    I++D++ SE   +  D   +  +I+
Sbjct: 224 DKYKDVPSEVRRKALIDYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L ++GY YE                    L F+ T+ G + D  L++++G  TY A+D+
Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDI 325

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           AY K K+  RGFD +I V G+DH G+V  ++    A+     +++V+L +LV+L   G  
Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           +KMSKR G  +TLR ++DEVG D+ RF    R     +DFD    KEQS ENPVFYVQYA
Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYA 445

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI RQ ++    +D      + +      +  E +LI  LA +P  I  A     
Sbjct: 446 HARICSIIRQLEEEGVKID----NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKTLA 501

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+++  Y+ D+AS+FH  ++  R       V+     L   R  L+ AV ++I + L+I+
Sbjct: 502 PHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARYVLILAVKTVIKNVLDIL 554

Query: 578 GVESPNEM 585
            + +P +M
Sbjct: 555 KITAPEKM 562


>gi|270308440|ref|YP_003330498.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270154332|gb|ACZ62170.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 556

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 193/561 (34%), Positives = 313/561 (55%), Gaps = 46/561 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IE P+   +G  +T+  + L++  G  P+ +AE++   I+    +  V +A  GFIN 
Sbjct: 35  ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAEILAGYIEPGEGIAKVSVAPPGFINF 94

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             S  +L  ++ +++     YG   +G G++V IEFVSANPTGP+H+GH R AV+G TL+
Sbjct: 95  TFSKEWLCSLVKTVLGEAENYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY V  E+YINDAG+QI+    ++F RYQQAL   ++ +P+  Y G Y+  +  
Sbjct: 155 NVLKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAA 213

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  KY  + L  P E     + +  +  M+ +I DDLK+L +  D++ SE   + G   
Sbjct: 214 EMVAKYGDKYLQMPLEIAQNDLGEIGMARMLCLISDDLKSLKVDFDVWFSERSLYSG--G 271

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +  +D L+   Y+ E      +   T           F ST++GD  D  +++SDG+ 
Sbjct: 272 QYKTAMDILSANNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFA+D+AY   K+ ER FD +I + G+DH G+V R++A+ +A+     ++  LL +++ 
Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMLSALGINPERLTTLLFQMIT 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  +++SKR G+ I+L  V++EVG+D+ RF  L R     +DFD    K++S ENP
Sbjct: 376 LKRGGELVRLSKRTGEMISLSEVIEEVGADACRFFFLSRSTESQMDFDLELAKKESAENP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAE 504
           V+YVQYA+AR  SI   AK+    L +           S  DT      +EL+L+  +AE
Sbjct: 436 VYYVQYAHARICSILSLAKE--KGLSY-----------SGGDTALLGEEAELELVRKMAE 482

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            P ++E      EP+ L +Y  +LA+ FH  +   R       V ++N +L+  RL+LV 
Sbjct: 483 LPEIVETVARTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNTELSAARLKLVD 535

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++   L+++G+ SP  M
Sbjct: 536 ASRIVLARTLHLMGMTSPQSM 556


>gi|258543874|ref|ZP_05704108.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520880|gb|EEV89739.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 592

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 207/615 (33%), Positives = 315/615 (51%), Gaps = 67/615 (10%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           S L   L  +    K+E+  L   + + R ++ AHG  S+N AM  ++   ++P   AE 
Sbjct: 7   SGLTTALHAVARAQKIEEGQLTLPLELGRCKNPAHGDYSSNVAMQYAKTFQMNPRQFAEA 66

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           ++A +   P + +V IAG GFIN+ L+      +L +IV  G  YGR+      K+ +EF
Sbjct: 67  LIAALPAHPGIAAVEIAGPGFINIRLASGSDSAVLETIVREGAAYGRHQAEHPQKILLEF 126

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+HVGH R A  G TLA+++  +G+ V  EYY+NDAG Q++ LALSV+WRY Q
Sbjct: 127 VSANPTGPLHVGHGRGAAYGATLANILRANGHHVDNEYYVNDAGRQMDILALSVYWRYMQ 186

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------------- 232
            +  +D  LP+G Y G Y+  + +E   +Y  +    PE  W+P                
Sbjct: 187 -ICGSDRTLPQGIYQGDYVVDIAREHYARYGDKHYRAPE-TWVPAHPAEWSEAAIDNGER 244

Query: 233 ----------------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                 V D  + A +  IRDDL+   +  D + SE        
Sbjct: 245 DAWIDAAIAALKNTLGEADYRAVFDAGLDAEVADIRDDLQEFGVTFDRWYSERALF--TD 302

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  L  +GY+YE                D  Q  FR++  GD+ DR + + +G 
Sbjct: 303 GRIAEMLGVLRARGYLYE---------------KDGAQW-FRASDFGDEKDRVVTRENGI 346

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY+RG+D MI + G+DH GY+ R+ A  AA+     ++++ L +   
Sbjct: 347 TTYFASDIAYHYDKYQRGYDRMIDIFGADHHGYMARVRASLAALGLAPEKLDITLVQFAV 406

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LY+DG  ++MS R+G F+TLR +  +VGSD+ RF  + RK  + LDFD       SK+NP
Sbjct: 407 LYKDGAKMQMSTRSGQFVTLRDLRAQVGSDAARFFYVMRKPEQHLDFDLDLATSHSKDNP 466

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            +YVQYA+AR   +  +A++    + FD     +  +E   +  E  L+  LA YP  I 
Sbjct: 467 YYYVQYAHARTSRVLERAQE--EGVPFDT-QTALAQREHLTEPEEKTLLRELARYPDTIA 523

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A      + +  YL DLA  +H ++  G +      V  ++  L   RL L HAV  ++
Sbjct: 524 AAGAQMAGHLIVNYLKDLAGAWHQYYDAGHK------VLHDDAALRDARLLLTHAVRQVL 577

Query: 571 NSGLNIIGVESPNEM 585
            +GL+IIGV +   M
Sbjct: 578 RNGLDIIGVAARERM 592


>gi|256827094|ref|YP_003151053.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583237|gb|ACU94371.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 575

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 196/569 (34%), Positives = 308/569 (54%), Gaps = 42/569 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPRD A+G  ++  A+  ++    +P  IA+ IV  I  +  +DSV IAG GFIN+ 
Sbjct: 33  ALERPRDLANGDWASTVALRSAKLAHTNPRQIAQAIVDHIPANNLIDSVDIAGAGFINIK 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+P+  + +++ +   G+++G++ I +G T VNIE+VSANPTGP HVGH R A +GD  A
Sbjct: 93  LAPTAFQSVVAQVRQDGVDFGKSTIEEGYTNVNIEYVSANPTGPFHVGHGRWAALGDATA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  +GY V  E YIND G+Q++    SV  RYQQ L   D ++PE  Y G Y+K + +
Sbjct: 153 RVMRHAGYTVYEENYINDHGSQMDNFGESVAVRYQQ-LLGRDVEMPESCYAGGYVKDIAQ 211

Query: 212 ELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            + D    + L+  P+E+ +   ++ + Q  +        A     D + SE   +  D 
Sbjct: 212 SIIDTDGDKWLDADPDERRVNF-RERAYQFELAEQHRICDAFGTTFDKWFSERSLYVKDA 270

Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              S +   ID +  +GY+YE                    + F+ST  GDD DR ++KS
Sbjct: 271 DGKSQVDRAIDAMREKGYIYES----------------DGAVWFKSTEFGDDKDRVVMKS 314

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +G  TYF +D+AY   K +RGF+++I + G+DH GYV R EA+ AA     A + V+L +
Sbjct: 315 NGETTYFTSDVAYHYDKMQRGFEHLIDLWGADHHGYVARCEAMLAAWGYPGA-LEVMLGQ 373

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV L+RDG P++MSKR G+ +T   V+DEVG DS R+MML R + + +DFD    K++  
Sbjct: 374 LVNLFRDGKPVRMSKRTGEMVTFEEVIDEVGVDSTRWMMLSRSSDQTIDFDIEVAKKRDA 433

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIF-------PDLDFDLFPRNVIPQESEFDT----SEL 496
            NPV+YVQYA+AR  SI R+A            ++  +     +IP  ++       SE+
Sbjct: 434 SNPVYYVQYAHARICSILRKAAPADLAAKAESGEISMNELAHAIIPAHADLTGLTHPSEI 493

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  +     ++ +A   +  ++L  Y  DLA +FH  + +         V   +  L 
Sbjct: 494 DLMRKMDGLQDLVASAARDRAAFRLTHYSQDLAGLFHAFYGNCH-------VITEDESLQ 546

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+ A   ++   L ++G+ +P +M
Sbjct: 547 NARLALIDATRIVLEISLGLLGISAPTKM 575


>gi|313894351|ref|ZP_07827916.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441175|gb|EFR59602.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 577

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 202/580 (34%), Positives = 308/580 (53%), Gaps = 60/580 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +  D  ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G +YG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++   + LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEADRIALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +   +  D + SE   H  +   I   I+ L   G VYE                    L
Sbjct: 271 RNFRVTFDNWFSERTVH--ETEEIHHSIEALKVLGKVYE----------------KNGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + KY+RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRSKYDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      Q+ +LL ++V L+RDG  +K+SKR+GD +TL  ++DEVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDQLTILLLQMVALFRDGELVKLSKRSGDSVTLDELIDEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q ++    + F  +       E+
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484

Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +F T     EL+LI  LAEYP  +  +   + P+++A YLYDLAS+FH  +  GR     
Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|297618464|ref|YP_003703623.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146301|gb|ADI03058.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 559

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 196/582 (33%), Positives = 317/582 (54%), Gaps = 34/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   ++   L++     K   + +   VIE PR+  HG  + N AM+L+R   + P+ I 
Sbjct: 10  DLRQKIVTALEKAKTGGKFNYQEIPAFVIEVPREKQHGDYACNVAMLLARQARMSPVAIG 69

Query: 66  ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL-IGKGTKV 123
           + I+  + + DP +  V + G GFIN +L   +L  +   +  SG  YG++  +GK  KV
Sbjct: 70  QAIIDLLPQNDPLISRVEVKGAGFINFFLKEDWLFDVPRVVWQSGESYGQHKPVGK--KV 127

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTG +H+G+ R   +GD+LA++++ +GYEV REYY+NDAG QI    LS+  
Sbjct: 128 QVEFVSANPTGDLHMGNARGGAIGDSLANILSMAGYEVEREYYVNDAGNQIELFGLSLEA 187

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY + L   +   PEG Y G  +    +   + Y   L+     +    + +++++  ++
Sbjct: 188 RYLE-LCGCEFRFPEGGYEGQDVVETVRHFIEAYGDYLVGANPYERRQKLTEFALKEKLE 246

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L+A  I++D++ SE   H  D   I ++ + L  +GY+Y                
Sbjct: 247 SIKTSLEAFGIRYDVWFSEQSLH--DSGKIEEVTEELKTKGYLY---------------- 288

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           +      FR+     + D  +++ +G  TYFAAD+AY K K+ERGFD +I V G+DH G+
Sbjct: 289 LKEGAWWFRAGEDSGEKDEVVIRKNGLPTYFAADIAYHKNKFERGFDWVINVWGADHHGH 348

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R++A  AA+     +++V+L +LVRLYR G  ++MSKR G  +TL  +++EVG D+ R
Sbjct: 349 VARMKAAIAALGYDPNRLDVILMQLVRLYRGGELVRMSKRTGTLVTLDELLEEVGKDAAR 408

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  + R     LDFD    ++QS+ENPV+YVQYA+AR  SI RQA+         L   +
Sbjct: 409 FFFVMRSPDSHLDFDMELAQKQSQENPVYYVQYAHARICSIMRQAERA----GILLKNPD 464

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +         EL+L+  +AE+P  I  A     P+++A Y+ DLA +FH +++H R   
Sbjct: 465 EVNLRLLCLPEELELLRKVAEFPNEISMAAATLSPHRIARYVLDLAGMFHSYYNHHR--- 521

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V      L   R+ L+ A+  ++ + L ++GV +P  M
Sbjct: 522 ----VLNEEENLRDARMVLMEAIRRVVKNSLGVLGVSAPERM 559


>gi|254521562|ref|ZP_05133617.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719153|gb|EED37678.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 562

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 196/569 (34%), Positives = 306/569 (53%), Gaps = 54/569 (9%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ +V  +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTRDHGDFATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++  +S++  G +YGRNL G G  V +E+VSANPTGP+HVGH R A +GD +A 
Sbjct: 92  LAPAAYQREAASVIKEGHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++  +G+   RE+Y NDAG QI  LALS   R +    + D   PEG Y G Y+  V + 
Sbjct: 152 VLDANGWNAKREFYYNDAGVQIENLALSTQARIKGIAPDQDG-WPEGGYRGEYIADVARA 210

Query: 213 L-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                  D   S ++   +   +  ++ ++V  +      DL A  +  DI+  E   + 
Sbjct: 211 YMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYA 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  RST  GDD DR + KS
Sbjct: 271 --DGKVAEAVAKLQASGHTYE----------------EGGALWLRSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG++TYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  V   +     +L
Sbjct: 313 DGTFTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG + TLR +++E G D+ R+ ++ RK    L FD    ++Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE--------FDTSELQ 497
           S +NPVFYVQYA+AR  S+ RQA++           + ++ +++          D + L 
Sbjct: 433 SNDNPVFYVQYAHARVCSLLRQAQE-----------KGLVYEQANGLANLGRLADDASLL 481

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLT 556
           L+  ++ YP V+E A ++ EP+ +A YL +LA  FH  W HG   P L    A+ N KLT
Sbjct: 482 LMNEISRYPEVVEAAGVSMEPHLVAQYLRELAHAFH-TWYHG--TPVLVDDAADRNAKLT 538

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
                L  A   ++ +GL+++GV +P +M
Sbjct: 539 -----LACAARQVLANGLDLLGVSAPEKM 562


>gi|57233947|ref|YP_181982.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|109894986|sp|Q3Z717|SYR_DEHE1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57224395|gb|AAW39452.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 556

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 312/561 (55%), Gaps = 46/561 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IE P+   +G  +T+  + L++  G  P+ +AE++   I+    +  V +A  GFIN 
Sbjct: 35  ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAEILAGYIEPGEGIAKVSVAPPGFINF 94

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             S  +L  ++ +I+     YG   +G G++V IEFVSANPTGP+H+GH R AV+G TL+
Sbjct: 95  TFSKEWLCNLVKTILGEAESYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +GY V  E+YINDAG+QI+    ++F RYQQAL   ++ +P+  Y G Y+  +  
Sbjct: 155 NVLKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAA 213

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  KY  + L  P E     + +  +  M+ +I DDLK+L +  D++ SE   + G   
Sbjct: 214 EMVAKYGDKYLQMPLEIAQNDLGEIGMARMLCLISDDLKSLKVDFDVWFSERSLYSG--G 271

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +  +D L    Y+ E      +   T           F ST++GD  D  +++SDG+ 
Sbjct: 272 QYKTAMDILLANNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFA+D+AY   K+ ER FD +I + G+DH G+V R++A+ +A+     ++  LL +++ 
Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMLSALGINPERLTTLLFQMIT 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  +++SKR G+ I+L  V++EVG+D+ RF  L R     +DFD    K++S ENP
Sbjct: 376 LKRGGELVRLSKRTGEMISLSEVIEEVGADACRFFFLSRSTESQMDFDLELAKKESAENP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAE 504
           V+YVQYA+AR  SI   AK+    L +           S  DT      +EL+LI  +AE
Sbjct: 436 VYYVQYAHARICSILSLAKE--KGLSY-----------SGGDTALLGEEAELELIRKMAE 482

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            P ++E      EP+ L +Y  +LA+ FH  +   R       V ++N +L+  RL+LV 
Sbjct: 483 LPEIVETVARTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNTELSSARLKLVD 535

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++   L+++G+ SP  M
Sbjct: 536 ASRIVLARTLHLMGMTSPQSM 556


>gi|237749364|ref|ZP_04579844.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380726|gb|EEO30817.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 571

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 200/574 (34%), Positives = 310/574 (54%), Gaps = 54/574 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           + +ERPRD +HG ++ N AM LS+PL  +P  IA+ I++ +  +P     ++S  IAG G
Sbjct: 32  VALERPRDASHGDIACNIAMQLSKPLKKNPREIAQTILSSLMTNPLHQGLIESGEIAGPG 91

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ S  + ++ +++    +YG +  G G KV +EFVSANPTGP+HVGH R   +G
Sbjct: 92  FINLRLTASAKQDVVKAVMDQKDKYGYSNTGTGRKVMVEFVSANPTGPLHVGHGRQGALG 151

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D++++L A  GY+VTRE+Y NDAG QI+ L LSV  R  + L   +   PE  Y G Y+ 
Sbjct: 152 DSISALFASQGYDVTREFYYNDAGVQIDNLTLSVQAR-AKGLKPGEEGWPESAYNGDYIA 210

Query: 208 HVG------KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +       K +A +    +    +   L  +++++V  +     +DL A  I  D F  
Sbjct: 211 DIATDFLAKKTVAARNCETVTASGDPDDLKSIREFAVAYLRNEQDNDLNAFGIHFDNFFL 270

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +R     ++D +D L ++G  +E                    L  R+T  GDD D
Sbjct: 271 ESSLYR--DGKVKDAVDTLTKEGKTFE----------------SEGALWLRTTEYGDDKD 312

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KA 379
           R + K+DG+YTYF  D+AY   K+ RGFD +I + GSDH G V R+ A    V++   KA
Sbjct: 313 RVMRKTDGTYTYFVPDVAYHINKFSRGFDKVINIQGSDHHGTVARVRAGLQGVNKGIPKA 372

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------DSVRFMMLWRKNS 432
             + +L ++V + +DG  +K+SKRAG ++T+R +++  G+       D+VRF ++ RK  
Sbjct: 373 FPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSGAGDVVRGRDAVRFFLISRKAD 432

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEF 491
               FD      QS ENPV+YVQYA+AR  S+F Q       LD  DL P          
Sbjct: 433 TEFVFDVDLALSQSDENPVYYVQYAHARICSVFSQWGGDESALDNVDLSPLT-------- 484

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
              E  L+  L++YP ++  A     P+ +AFYL +LA   HG+++        RF+   
Sbjct: 485 SPHEYALLSKLSDYPDILTRAQEELSPHLVAFYLRELAGELHGYYN------AERFL-VE 537

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  + + RL L+ A   ++ +GL ++GV +P +M
Sbjct: 538 DETVKLARLALLKATRQVLRNGLALLGVSAPTKM 571


>gi|217969154|ref|YP_002354388.1| arginyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506481|gb|ACK53492.1| arginyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 587

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 202/596 (33%), Positives = 308/596 (51%), Gaps = 79/596 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++ERP+  +HG  +TN A+ L++PL  +P  +A L++A +     V    +AG GFIN 
Sbjct: 29  ILLERPKQASHGDFATNLALQLAKPLKRNPRELAGLLLAELPPSKLVARAEVAGAGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+      ++  ++  G ++GR   GKG KV +EFVSANPTGP+HVGH R A  G +L+
Sbjct: 89  TLASDAKTAVVREVLARGADFGRG-AGKGIKVQVEFVSANPTGPLHVGHGRGAAYGASLS 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF+GYEV+REYY+NDAG Q++ LALS + RY  A +  +   P   Y G Y+  +G+
Sbjct: 148 DVLAFAGYEVSREYYVNDAGRQMDILALSTWLRYL-AFFGIEIPFPPNAYQGDYVVDMGR 206

Query: 212 ELADKYSSELLNFPEEKWL---------------------------------------PI 232
           E+ D +          + L                                       P 
Sbjct: 207 EMRDAHQDRFAKVTAMQILAGTPGLPPSDRKDDEAKQQREEHLDALIANAKKLLGEDYPW 266

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V  +++   +   R+DL+   ++ D + SE      D   +   +  L + GY+Y     
Sbjct: 267 VHGFALNEQLGDGREDLQEFGVRFDKWFSEQSLF--DTGLVERAVTQLEKAGYIY----- 319

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                      +      FRST  GD+ DR + + +G +TYFA+D+AY   KYERGFD M
Sbjct: 320 -----------LQDGAKWFRSTAFGDEKDRVVQRENGLFTYFASDIAYHLNKYERGFDRM 368

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I + G+DH GY+ R++   AA+    A+++V L +   LYRDG    MS R+G+F+TLR 
Sbjct: 369 IDIWGADHHGYIPRVKGAIAALGLDPARLDVALVQFAVLYRDGQKTSMSTRSGEFVTLRE 428

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +  EVG+D+ RF  + RK+ + LDFD    K QS ENPV+YVQYA+AR  S+  Q     
Sbjct: 429 LRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYVQYAHARVCSVLDQWGGEA 488

Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +L   D  L            +  EL L   LA +  ++++A     P+++AFYL DLA
Sbjct: 489 AELAGADLGLLQ----------NERELALCARLASFAELVQDAAAGYAPHQIAFYLKDLA 538

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  ++  R       +   +  L + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 539 ADFHSWYNAER-------MLVEDEALKLARLALAAAVRQVLVTGLKMLGVSAPESM 587


>gi|282849795|ref|ZP_06259179.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580732|gb|EFB86131.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 577

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 204/583 (34%), Positives = 307/583 (52%), Gaps = 66/583 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +  D  ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G EYG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGTEYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++   + LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEVDRIALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +   +  D + SE   H  D   I   ++ L   G VYE                    L
Sbjct: 271 RNFRVTFDNWFSERTVHESDE--IHHSVEALKALGKVYE----------------KDGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + KY+RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      ++ VLL ++V L+RDG  +K+SKR+GD +TL  +++EVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGRLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIP 486
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q  +    F D +          
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVHEAGIAFGDYN---------- 482

Query: 487 QESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            E++F T     EL+LI  LAEYP  +  A   + P+++A YLYDLAS+FH  +  GR  
Sbjct: 483 -ETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGR-- 539

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 -----IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|312898221|ref|ZP_07757612.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620718|gb|EFQ04287.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 554

 Score =  326 bits (835), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 194/555 (34%), Positives = 302/555 (54%), Gaps = 33/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +++E P     G  +TN AM  +R     P  IA++++  +   P ++   +AG GFIN 
Sbjct: 32  VLLEVPPQKEFGDFATNIAMQSARIAHKSPRMIADVLLKHLDA-PWLEKAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L  I+  G +YG+  +     V +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKHDIIYDTLCHILEQGKQYGQAPLRAEDTVQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+  +GY V  EYYINDAG Q+N LA SV  RY + L    +++PE  Y G  +    +
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQMNNLAASVNARYLE-LLGKKAEIPENGYHGADIIDTAR 209

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + ++   + L   E+  L I K+ + +  +K ++ DL++ N+  D + SE   H   P 
Sbjct: 210 AIIEQDGDKYLQMDEKDRLEIFKNRAYEEKLKALKRDLESFNVTFDKWFSERTLH---PE 266

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I+   + L   G +YE                    L  +ST  GDD DR +++ +G  
Sbjct: 267 AIKKACETLKGNGNMYE----------------KDGALWLKSTAYGDDKDRVVIRDNGVP 310

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY AAD+AY K KYER F  +I + G+DH GYV R++A  AA+     Q+ +LL ++V L
Sbjct: 311 TYLAADIAYHKNKYERQFKKLINIWGADHHGYVARVKAAMAALGLDPNQLEILLLQMVSL 370

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +R+G  +KMSKR G  ITL  +++EVG+D+ R+  + R     LDFD    K  S ENPV
Sbjct: 371 FRNGELVKMSKRTGQAITLNELIEEVGTDAARYFFIMRSLDTQLDFDLDLAKSHSNENPV 430

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +Y+QYA AR  SI++Q   I  + D FD+  +N I  +   +  EL LI  +A YP  I 
Sbjct: 431 YYIQYANARIFSIYKQ---IAENGDVFDMTWKN-IKWDKLKEERELALIKKMAAYPEEIR 486

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   + P+++A ++Y++A +FH  +++         +Q+ +++L   RL LV AV   I
Sbjct: 487 KAAAERAPHRIAHFVYEMAGLFHAFYNN------CHIIQS-DKELEEARLALVTAVQITI 539

Query: 571 NSGLNIIGVESPNEM 585
            + L ++G+ +P  M
Sbjct: 540 ANCLAVLGISAPETM 554


>gi|170781869|ref|YP_001710201.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189083527|sp|B0RAP7|SYR_CLAMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169156437|emb|CAQ01585.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 554

 Score =  326 bits (835), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 190/557 (34%), Positives = 292/557 (52%), Gaps = 35/557 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D +V+ERPR+  HG  +TN AM +++PLG  P TIA  I   +   P V  V +AG GFI
Sbjct: 32  DMVVLERPRNRDHGDWATNIAMRIAKPLGESPRTIAADIAKALGELPQVAKVDVAGPGFI 91

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +    +  +IV SG  YGR    +G ++N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 92  NITLEAAAAGALAHTIVESGPAYGRGHSLEGIRINLEFVSANPTGPIHLGGVRWAAVGDS 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++   G +VTREYY ND G+QI+  A S+   +         + PE  Y G Y+  +
Sbjct: 152 LARILQAEGADVTREYYFNDHGSQIDRFARSLLASHL------GEETPEDGYGGAYIGEI 205

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + + + Y  ++     E    + +    + M   I+  L    +  D+F  ED  H  +
Sbjct: 206 AERVVEGYEGDIDALTREAQQEVFRKSGTELMFGEIKQKLHDFGVDFDVFFHEDSLH--E 263

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   I  L   G+V+E                +   +  R+T  GDD DR +++S G
Sbjct: 264 SGAVDRAIARLTELGHVFE----------------EDGAIWLRTTTFGDDRDRVVIRSTG 307

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388
              Y + DL Y+  K ERGF+  I ++G+DH GYV R+ A+  A  +     + +L+ ++
Sbjct: 308 EPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMVEAFGDTPGVNLQILIGQM 367

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L RDG P++MSKRAG  +TL  +VD VG D+ R+ ++     + LD D   + +++ +
Sbjct: 368 VNLLRDGEPVRMSKRAGTIVTLDDLVDAVGVDAGRYALVRSSADQNLDIDLAVLGKRTND 427

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR  ++ R A     D       R+    E     +E  L+  L E+PR+
Sbjct: 428 NPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPRI 480

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   +EP+++A Y+ +LA  +H  +   R  PR          L   RL L  AV  
Sbjct: 481 VAQAAELREPHRVARYVEELAGSYHRWYDSCRVVPR---GDEEVTDLHRTRLWLNDAVRQ 537

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GLN++GV +P  M
Sbjct: 538 VVANGLNLVGVSAPERM 554


>gi|296128906|ref|YP_003636156.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020721|gb|ADG73957.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 560

 Score =  325 bits (834), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 198/564 (35%), Positives = 303/564 (53%), Gaps = 43/564 (7%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +R+ IERPR   HG  +TN A+ L++  G +P   AE +  R+   P V +V +AG GF+
Sbjct: 32  ERVHIERPRQREHGDWATNVALQLAKKAGSNPRAFAEELARRLADVPGVAAVDVAGPGFL 91

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++   IV  G  YGRN    G KVN+EFVSANPTGP+H+G  R A VGD 
Sbjct: 92  NIRLDAAAAGELARGIVEQGAGYGRNATFAGLKVNLEFVSANPTGPLHIGGVRWAAVGDA 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  SG EVTREYY ND GAQI+  A S+  R +        + PE  Y G Y+  +
Sbjct: 152 LARVLQASGAEVTREYYFNDHGAQIDRFARSLVARARG------EEAPEDGYGGQYIADI 205

Query: 210 G-KELADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
             + +AD  ++   +    P+ +     +   V+ M   I+  L    +  D++  ED  
Sbjct: 206 ADRVIADAQAAGEPDPRTLPDAEATEAFRARGVELMFAEIKTSLHDFGVDFDVYFHEDSL 265

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  +   +   ++ L   G+++E                    L  R+T  GDD DR ++
Sbjct: 266 H--ESGAVERAVERLRASGHMFEA----------------DGALWLRTTAFGDDKDRVVV 307

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVL 384
           KSDG   Y A D+AY+  K ERGFD ++ ++GSDH GYV R+ AV AA   E    + +L
Sbjct: 308 KSDGQAAYIAGDIAYYLDKRERGFDRVVIMLGSDHHGYVGRMMAVCAAFGDEPHVNLELL 367

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + +LV L +DG P++MSKRAG  IT+  +V+ VG D+ R+ +    + + +D D   + +
Sbjct: 368 IGQLVNLVKDGEPVRMSKRAGTIITIDDLVEAVGVDAARYALSRSSSDQQIDLDLDLLAK 427

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            + ENPVFYVQYA+AR  ++ R A +     + D F  +++  E     SE +L+  LA+
Sbjct: 428 ATNENPVFYVQYAHARTAAMARNAAEAGVRRE-DGFDASLLDHE-----SEAKLLGLLAD 481

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQ 561
           +PRV+  A   +EP+++A Y  D+A  +H  +   R     R V   + +LT     RL 
Sbjct: 482 FPRVVAQAADLREPHRVARYAEDVAGAYHKWYDQKR-----RVVPWGDEELTDAHRTRLW 536

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ + L+++GV +P  M
Sbjct: 537 LNDATRQVLANALDLLGVSAPERM 560


>gi|251772529|gb|EES53095.1| arginyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 589

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 314/595 (52%), Gaps = 65/595 (10%)

Query: 26  KKILDRIV-----IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           + +LDR +     +E P+    G LST  AM L++ +G  P  +A  I+  ++  P+  S
Sbjct: 25  QDVLDRTLARGVRLEWPKKEEFGDLSTPMAMSLAKDMGKTPRHVAGTILESLRQIPETSS 84

Query: 81  VF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           +F    IAG G++N + S  Y    L   +       R  I K   +N+EFVSANPTGP+
Sbjct: 85  LFSKVDIAGPGYLNFFFSSPYFSDFLVQCLSGSALVDRVAIPK--NINVEFVSANPTGPL 142

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R A  GD+LA ++   G++V+ EYYINDAG Q+N L  SV+  +++   +  S+ 
Sbjct: 143 HVGHGRGAAFGDSLARILREVGHDVSTEYYINDAGNQMNMLGKSVYLAFRKLTGHESSEE 202

Query: 197 -------PEGYYPGVYLKHVGKE----------------LADKYSSELLNFPEEKWLPIV 233
                   EGY  G Y+  + KE                LA +++ ++ +F         
Sbjct: 203 KVRLLGDTEGYR-GDYIAGIAKEILDNPKGLPDALREDVLAGRFTDQVQSF--------F 253

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            D S + +M+ IR+DL    +  D + SE   H      +  I   L R        L  
Sbjct: 254 TDVSQRRIMEGIREDLDRFGVTFDRYFSEKTLHEKGADGLSSIARWLTR--------LEK 305

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                    D     L FR+T + DD DR L KSDGSYTYFAAD+AY   K +RG+D M+
Sbjct: 306 ESDGAVYASD---GALWFRTTAMADDKDRVLRKSDGSYTYFAADIAYHADKVDRGYDIMV 362

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLC--ELVRLYRDGMPIKMSKRAGDFITL 410
            V G+DH GY  R++AVA  +S++ K Q+++ +C  +LV L RDG  + MS RAG+F+TL
Sbjct: 363 DVWGADHHGYQARMQAVAKVLSDRAKRQVDLKICLIQLVSLLRDGKAVSMSTRAGEFVTL 422

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             V+DEVG D+ RF  L R +   L+FD  K KE+S +NPV+YVQYA+AR +S+  QAK 
Sbjct: 423 AEVLDEVGVDATRFSYLTRSHESALEFDLSKAKERSMDNPVYYVQYAHARVKSLLAQAKS 482

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               +  D  P +  P E   + +   LI  +A++  V+  A  + E + L  YL  LA 
Sbjct: 483 RGVTIG-DFHPEDFSPLE---EPAARSLIRLMAQFSGVLHRAAESFEVHPLTDYLTALAG 538

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +H ++ H     R+   +  +R + M R+ L  AV  I+ SGL ++GV +P+ M
Sbjct: 539 AYHHYYFH----HRILSAEDADRPVMMARIGLSMAVGRILASGLALLGVRAPDSM 589


>gi|291287007|ref|YP_003503823.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884167|gb|ADD67867.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 549

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 186/553 (33%), Positives = 300/553 (54%), Gaps = 33/553 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            IE P +  HG  + NAAM  +R     P+ IA+ +  R+K  P +        GFIN +
Sbjct: 30  TIEVPNNSEHGDFAANAAMKSARIFRTKPMDIAKKLCERVK-HPMIKKSEAVMPGFINFF 88

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   +   ++         +  ++ G+  K  +EFVSANPTGP+HVGH R A  GD+LA 
Sbjct: 89  IDNGFYHDVVKRAATDDSFFESDM-GQKRKTMVEFVSANPTGPLHVGHGRNAAYGDSLAK 147

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++A +G++V  EYY+NDAG Q+N L  S++ RY + L   +   PE  Y G Y+  + KE
Sbjct: 148 ILAAAGFDVHTEYYVNDAGNQMNNLGKSIYVRYME-LAGGEIPFPEDGYHGEYIIDIAKE 206

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L +++  ++   PE++   +     ++ +   I + LK   +  + + SE   +     P
Sbjct: 207 LFEEHGHKIAEMPEKEGTDVCFKKGLKDITANIANTLKNFKVDMEEYFSEKSLYENGDVP 266

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
               +D L  +G++YE               +D   L F+ST  GDD DR + +S+G YT
Sbjct: 267 AS--LDYLKERGFIYE---------------LD-GALWFKSTEFGDDKDRVVKRSNGEYT 308

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY K KY+RGF   I V G+DH GYVKRL +   A+  +  +  V L ++V L 
Sbjct: 309 YFASDIAYHKNKYDRGFKTTIDVWGADHHGYVKRLSSAIEAIGYEDREFAVSLIQMVNLV 368

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
             G  + MS RAG FI L  +++EVGSD+ R+    R      DFD    K++  +NPVF
Sbjct: 369 NGGERVSMSTRAGSFIELDWLINEVGSDASRYFYSMRDYEAQFDFDIALAKKRESDNPVF 428

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYA+AR +S+ R+A +     +      N+  +E      EL+LI  + +Y  V+E +
Sbjct: 429 YIQYAHARVQSVLRKAAEENIAYEICAGLDNLNSKE------ELELIKKIYDYINVLEQS 482

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              ++P+++ +YL +LA++FH ++ +       + + ++N+ LT  RL L  AV + I +
Sbjct: 483 ARNRQPHRVGYYLQELAAMFHSYYFNN------KMLNSDNKDLTSARLTLAQAVGNTIRN 536

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P+ M
Sbjct: 537 GLALLGVSAPDRM 549


>gi|269798641|ref|YP_003312541.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269095270|gb|ACZ25261.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 577

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 202/580 (34%), Positives = 307/580 (52%), Gaps = 60/580 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +     ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNF-AWLERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G EYG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGTEYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++   + LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEADRVALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +   +  D + SE   H  D   I   ++ L   G VYE                    L
Sbjct: 271 RNFRVTFDNWFSERTVHETDE--IHHSVEALKALGKVYE----------------KEGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + K++RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKFDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      ++ VLL ++V L+RDG  +K+SKR+GD +TL  ++DEVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIDEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q ++    + F  +       E+
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484

Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +F T     EL+LI  LAEYP  +  A   + P+++A YLYDLAS+FH  +  GR     
Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|303230487|ref|ZP_07317246.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514853|gb|EFL56836.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 577

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/580 (34%), Positives = 308/580 (53%), Gaps = 60/580 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +  D  ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAETLISHMDFDW-LERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G +YG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++  S+ LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGSDTLNAMNEADRVALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               +  D + SE   H  D   I   ++ L   G VYE                    L
Sbjct: 271 SNFRVTFDNWFSERTVHEADE--IHHSVEALKALGKVYE----------------KDGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + KY+RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      ++ VLL ++V L+RDG  +K+SKR+GD +TL  +++EVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q ++    + F  +       E+
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484

Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +F T     EL+LI  LAEYP  +  +   + P+++A YL+DLAS+FH  +  GR     
Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHRAPHRIARYLFDLASMFHSFYRQGR----- 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 --IIGVDPSLQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|296271958|ref|YP_003654589.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096133|gb|ADG92083.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 530

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 310/558 (55%), Gaps = 43/558 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L+ +V+E+P+D + GH +T  A  L++ L  +P+ IA+ +  + K     DSV  A KGF
Sbjct: 15  LENLVLEKPKDISLGHFATPVAFSLAKELRKNPMQIAQELADKFKDSEIFDSV-TAVKGF 73

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N  LS ++L  ++S +      + +    K  K+ +E+VSANPTGP+H+GH R A+ GD
Sbjct: 74  VNFKLSNTFLENLISKLFEDENSFAKGE-NKNEKILLEYVSANPTGPLHIGHARGAIFGD 132

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TLA +    GY+V  EYYINDAGAQ++ L LSV    ++ L N   + PE YY G YL  
Sbjct: 133 TLARVGRHLGYDVQTEYYINDAGAQMDMLGLSVSLAGREFLLNETVEYPESYYRGEYLVD 192

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + KE+   +  ++ N  +E     +  ++   ++KII+ DLK + I+ D FISE+  +  
Sbjct: 193 IAKEIQKNFGDDIFN--DESRFREMAMFAKDEVLKIIKKDLKDIGIEFDTFISENSLY-- 248

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             S   D  + L + G +YE                  +++  RST  GDD DR +++ +
Sbjct: 249 --SSWEDTKNVLEKNGSLYE----------------KDEKVFLRSTAHGDDSDRVVVRDN 290

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TY A D+ Y K KY+R FD  I + G+DH GY+ R++A    +    +++ ++L ++
Sbjct: 291 GIPTYLAGDIIYHKNKYDRNFDRYINIWGADHHGYITRVKAAIEFLGNDSSKLEIILSQM 350

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L + G P KMSKR G+FI +  + +E+G+D++RF+ L RK+   L+FD   +K Q   
Sbjct: 351 VQLLKGGEPYKMSKRKGNFILMSDISEEIGADALRFVFLTRKSDTHLEFDLETLKNQDSS 410

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAEYPR 507
           NPVFY+ YA+AR   +F +A         +L P++V+ ++  + +   + LI      P 
Sbjct: 411 NPVFYINYAHARINQVFVKA---------NLTPKDVLNEKFGDLNEDSINLIYEALLLPT 461

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           VI  A   ++  K+  YLY+LAS  H  ++   E+  L   + N+       L+++  V+
Sbjct: 462 VISEAFEKRDMQKITDYLYNLASSVHKFYN---EHKILETQEQNS------YLKVLSVVS 512

Query: 568 SIINSGLNIIGVESPNEM 585
             I +GL ++G+E+   M
Sbjct: 513 LSIRTGLKLLGIEAKEVM 530


>gi|239917325|ref|YP_002956883.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414195|ref|ZP_06245937.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511651|sp|C5CA60|SYR_MICLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|239838532|gb|ACS30329.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 556

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 207/601 (34%), Positives = 324/601 (53%), Gaps = 68/601 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L A  S+ L + +   D    + + I   R+ +ERPR   HG  +TN A+ L +  G+ P
Sbjct: 6   LSALLSAVLTDAVDAGDLPAALREGITPARVKVERPRSREHGDWATNVALQLGKKAGMAP 65

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A L+  R+   P + +V +AG GF+N+ L  +    +   IV +G EYGRN    G 
Sbjct: 66  RDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDTLAGH 125

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VN+EFVSANPTGP+H+GH R A +GD +A L+  SG +VT EYY+NDAG Q+N  A SV
Sbjct: 126 TVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADSV 185

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSV 238
             R       +  D+P G YPG Y+    +ELAD  + E   +    +E   P+V++ + 
Sbjct: 186 LARL------HGRDVPAGGYPGAYV----QELADAVALEHPDVRELTDEAARPVVREAAY 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M+ I+D L A ++  D+F SE   H  D   I   +  L  QG++            
Sbjct: 236 RLQMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIDQAVQRLREQGHIE----------- 282

Query: 299 TQKCDMDRKQLLF-RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 DR+  ++ ++T  GDD DR L++++G  TYFAAD AY+  K +RGF+  +Y++G
Sbjct: 283 ------DREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLG 336

Query: 358 SDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +DH GYV RL+A+AAA  +  A  I +L+ +L+ +  +G   K+SKRAG+ I L+ +V+ 
Sbjct: 337 ADHHGYVNRLKAIAAAAGDDPATNIEILIGQLISV--NGA--KLSKRAGNIIELKDLVEW 392

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D++R+ +        L  D   ++  + +NPV+YVQYA+AR     R A+    D  
Sbjct: 393 LGRDALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD-- 450

Query: 477 FDLFPRNVIPQESEFD------TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                       SEFD       +E +L+  LAE+P V+  A   +EP+++  +L  +A 
Sbjct: 451 -----------RSEFDAALLTHATESELLAQLAEFPAVVAAAARLREPHRVTRHLEVIAG 499

Query: 531 VFHGHWSHGR------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +H  ++  R      ++   R V+  NR     RL L  A A ++ +GL ++GV +P +
Sbjct: 500 AYHSWYAACRIVPMPTDDGTPRPVETLNR----TRLWLNDATAQVLANGLGLLGVSAPEK 555

Query: 585 M 585
           M
Sbjct: 556 M 556


>gi|306781626|ref|ZP_07419963.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002]
 gi|306784014|ref|ZP_07422336.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003]
 gi|306788377|ref|ZP_07426699.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004]
 gi|306792704|ref|ZP_07431006.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005]
 gi|306797110|ref|ZP_07435412.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006]
 gi|306802990|ref|ZP_07439658.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008]
 gi|306807180|ref|ZP_07443848.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007]
 gi|306967379|ref|ZP_07480040.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009]
 gi|308325587|gb|EFP14438.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002]
 gi|308331249|gb|EFP20100.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003]
 gi|308335065|gb|EFP23916.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004]
 gi|308338873|gb|EFP27724.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005]
 gi|308342558|gb|EFP31409.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006]
 gi|308346421|gb|EFP35272.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007]
 gi|308350364|gb|EFP39215.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008]
 gi|308354993|gb|EFP43844.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009]
          Length = 550

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 204/592 (34%), Positives = 308/592 (52%), Gaps = 56/592 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L+  +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLANKVGTNPRE 63

Query: 64  IAELIV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  +  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 64  LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+ 
Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          P+  Y G Y+ ++ +++  K + + L+ P+ +     +   V  M 
Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L       D++  ED  H G    + + I  L   G +YE      K   T   
Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH G
Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ 
Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D       S ENP +YVQYA+AR  ++ R A ++           
Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPAYYVQYAHARLSALARNAAEL----------- 446

Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +IP     DT+ L+L+ H         L E+PRV+E A   +EP+++  YL DLA  +H
Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  P+          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|237747206|ref|ZP_04577686.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378557|gb|EEO28648.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 571

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 202/584 (34%), Positives = 313/584 (53%), Gaps = 55/584 (9%)

Query: 24  VEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
            E + LD+   + +ERPRD +HG ++ N AM L++PL  +P  IA+ I++ +  +P+ +S
Sbjct: 21  TEGQNLDKHPSVSLERPRDASHGDIACNIAMQLAKPLKKNPRQIAQTILSSVLSNPEHES 80

Query: 81  VF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           +     IAG GFINL L+ S  + ++ +++    +YG    G G KV +EFVSANPTGP+
Sbjct: 81  LIESGEIAGPGFINLRLTSSAKQSVVKTVIKQKEKYGFGNQGAGKKVMVEFVSANPTGPL 140

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R   +GD +++L    GY VTRE+Y NDAG QI  L LSV  R  + L   D+  
Sbjct: 141 HVGHGRQGALGDAISTLFETQGYSVTREFYYNDAGVQIENLTLSVQAR-AKGLKPGDAGW 199

Query: 197 PEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           PE  Y G Y+  +      GK L  +    +      + L  +++++V  + K   +DL 
Sbjct: 200 PESAYNGDYIADIAADFLAGKTLEARNCQPVTGSGNVEDLKSIREFAVAYLRKEQDNDLN 259

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           A  I  D F  E   +R     +++ +D L ++G  +E                    L 
Sbjct: 260 AFGIHFDNFFLESSLYR--DGKVQETVDTLTKEGKTFE----------------SEGALW 301

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            ++T  GDD DR + K+DG+YTYF  D+AY   K++RGFD +I V GSDH G V R+ A 
Sbjct: 302 LKTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKWKRGFDKVINVQGSDHHGTVARVRAG 361

Query: 371 AAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------EVGSDS 421
             AV++       + +L ++V + +DG  +K+SKRAG ++T+R +++       E G D+
Sbjct: 362 LQAVNQDIPPGFPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSGAGDVERGRDA 421

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRF ++ RK      FD      +S ENPV+YVQYA+AR  S+F Q       L+     
Sbjct: 422 VRFFLISRKADTEFVFDVDLALSRSDENPVYYVQYAHARICSVFSQWGGNESVLEHADLS 481

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             V P E+        L+  LA+YP ++  A     P+ +AFYL +LA   HG+++    
Sbjct: 482 ALVSPHEN-------ALLTKLADYPDILVRALDELSPHLVAFYLRELAGELHGYYN---- 530

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               RF+  N+    + RL L+ A   ++ +GL ++GV +P +M
Sbjct: 531 --AERFL-VNDEPTKLARLALLKATRQVLRNGLALLGVSAPVKM 571


>gi|325066827|ref|ZP_08125500.1| arginyl-tRNA synthetase [Actinomyces oris K20]
          Length = 561

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 192/563 (34%), Positives = 300/563 (53%), Gaps = 47/563 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  STN AM L++     P  +AEL+V R++    + SV +AG GF+N+ L
Sbjct: 35  VERPRNRDHGDWSTNVAMQLAKKASTKPRDLAELLVPRLEALDGIASVEVAGPGFLNIRL 94

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  SIV +G  YGRN    G  +N+E+VSANPTGP+H+G  R A VGD+LA +
Sbjct: 95  DAASAGELARSIVEAGQAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           ++  G +VTREYY ND G QI+  A S+    +        + PE  Y G Y+  + +++
Sbjct: 155 LSACGAQVTREYYFNDHGTQIDRFARSLLASAR------GQETPEDGYGGAYISEIAQQV 208

Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            AD+ ++   +    P+ +   + +   V  M   ++ +L A     D+F  ED  H   
Sbjct: 209 TADELAAGRPDPATLPDAEATEVFRSRGVDLMFAAVKAELHAFRSDFDVFFHEDSLHTS- 267

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   I  L  +G + E      +   T            R+T  GDD DR L+KSDG
Sbjct: 268 -GAVERAIARLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388
           +  YFAADLAY+  K ERG D  +Y++G+DH GY+ R+ A+ AA  +     + +L+ +L
Sbjct: 311 NAAYFAADLAYYLDKRERGADCAVYLLGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 370

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R+G+P++MSKRAG  +TL  +VD VG D+ R+ +       ++D D   +     +
Sbjct: 371 VNLVRNGVPVRMSKRAGTIVTLEDLVDAVGVDAARYALARSSMDSMIDIDLDLLASSISD 430

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF------DTSELQLIVHL 502
           NPV+YVQYA+AR R++ R A +     D         P E+ F      D ++  L+  L
Sbjct: 431 NPVYYVQYAHARTRNVARNAAEHGVSRD---------PNEAPFEPGALDDPADAALLGVL 481

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P  +  A   +E +++A YL  LA+ +H  +   R  PR      +     + RL L
Sbjct: 482 AQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGATRVTPRGDDAVDSGH---VARLWL 538

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV  ++ +GL+++GV +P  M
Sbjct: 539 NDAVGQVLANGLDLLGVSAPERM 561


>gi|30248381|ref|NP_840451.1| arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|39932153|sp|Q82XC1|SYR_NITEU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|30138267|emb|CAD84275.1| Arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 586

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 197/591 (33%), Positives = 312/591 (52%), Gaps = 72/591 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I + RP+   HG  S+N AM L+R L  +PL +A+ ++  +     V+   +AG GFIN
Sbjct: 32  QIELLRPKLADHGDYSSNLAMKLARRLRRNPLELAKALIGALPDSSCVEKADVAGGGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L  +  ++ L +++ +G  +G + +G G  + IEFVSANPTGP+HVGH R A  G +L
Sbjct: 92  FFLKKTAKQQFLHAVLQAGDSFGHSRLGAGKTIQIEFVSANPTGPLHVGHGRGAAFGASL 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A++M  +GY VTRE+Y+NDAG Q++ L LS + RY   L       P   Y G Y+  + 
Sbjct: 152 ANIMTAAGYAVTREFYVNDAGRQMDILTLSTWLRYLD-LCGLSFSFPANAYRGQYVADMA 210

Query: 211 KEL----ADKY---------------SSELLNFPEEKWLPIV--------KDYS------ 237
            E+     D+Y               +S  ++  +E+   ++        +DY+      
Sbjct: 211 SEIYQAQGDRYAHRSDATIRQLTEISTSTTIDSEDERLDRLITAAKSILDQDYADLHNFV 270

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +   +   R+DL    ++ + + SE                +L   G V   +      K
Sbjct: 271 LTEQLADCRNDLMEFGVEFETWFSEQ---------------SLFDSGMVARAVQLLDDKK 315

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
              + D     L FRST  GD+ DR + + +G YTYFA+D+AY   KYERGFD ++ + G
Sbjct: 316 LLYRQD---GALWFRSTDFGDEKDRVVQRENGLYTYFASDIAYHLSKYERGFDYLLNIWG 372

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++    A+S    ++ + L +   LYRDG  + MS R+G+F+TLR +  EV
Sbjct: 373 ADHHGYIPRVKGAIEALSLDPGRLEIALVQFAVLYRDGKKVSMSTRSGEFVTLRQLRQEV 432

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ---AKDIFPD 474
           G+D+ RF  + RK+ + LDFD    K QS +NPV+YVQYA+AR  S+  Q   A+DI   
Sbjct: 433 GNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVYYVQYAHARICSVLGQWGGAEDILAR 492

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            + +L            D +EL L+  + ++   IE A   + P+ +AF+L +LA  FH 
Sbjct: 493 AETELLT----------DPAELVLLQKMIDFTDTIEAAAKERAPHLIAFFLRELAGEFHS 542

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++        RF+   +  L + RL L+ AV  I++ GL ++GV +P EM
Sbjct: 543 YYNS------TRFL-VEDESLKITRLALISAVRQILSKGLTLLGVTAPREM 586


>gi|288942805|ref|YP_003445045.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288898177|gb|ADC64013.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 593

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 196/595 (32%), Positives = 307/595 (51%), Gaps = 72/595 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ER +D AHG  ++N AM+L++P    P  +A+ +V  +   P V  V IAG GFIN 
Sbjct: 30  IQVERAKDSAHGDFASNLAMLLAKPARAKPRDLAQQLVDALPASPLVARVEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+    R ++  I+ +G +YGR+ IG G +V +EFVSANPTGP+HVGH R A  G  +A
Sbjct: 90  FLAEDAYRTLVPRILDAGPDYGRSHIGAGQRVQVEFVSANPTGPLHVGHGRGAAYGAVVA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG- 210
            L+   G++V REYY+NDAG Q++ L  SV+ RY + L   +   P   Y G Y+  +  
Sbjct: 150 DLLEAVGFDVHREYYVNDAGRQMDILGTSVWLRYLE-LCGEELRFPSNGYKGDYVWDIAA 208

Query: 211 ---KELADKYSSE----LLNFPEEKWLPI------------------------------- 232
              +E  D Y  E        P +   P+                               
Sbjct: 209 TLHREHGDAYRVEAEQVFAGLPADA--PVEGEPQDQTGDKEAHIDGLIAAAKRLLGDNRY 266

Query: 233 --VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V +  +  ++  IR+DL    + +  + SE      +   +   I+ L   G+VYE  
Sbjct: 267 RYVFELGLNTILDDIREDLAQFGVTYQEWYSERSL--TESGAVNRAIERLRESGHVYE-- 322

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             L FRST  GD+ DR +++ +G  TYFA+D+AY   K ERGFD
Sbjct: 323 --------------QNGALWFRSTAFGDEKDRVVVRENGQSTYFASDIAYHMDKLERGFD 368

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I + G+DH GY+ R++A   A+ +   +++VLL +   LYR G   +MS R+G+F+TL
Sbjct: 369 RVIDIWGADHHGYIPRVKAALQALGDDADKLDVLLVQFAILYRGGEKAQMSTRSGEFVTL 428

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +  EVG D+ RF  + R+  + +DFD    K +S +NPV+YVQYA+AR  ++ RQA +
Sbjct: 429 RELRQEVGRDAARFFYVMRRCEQHMDFDLDLAKSESSDNPVYYVQYAHARICAVLRQAAE 488

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               ++      N+   E   +  E  L+  L  YP  +E A +  EP+++  YL +LA+
Sbjct: 489 RGLAVEPSAGTHNL---ERLTEAHEQALLRTLGRYPETVEQAALKAEPHQITHYLRELAN 545

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             H +++    +P L     ++  L   R++L+ A   ++ +GL +IGV +P  M
Sbjct: 546 DLHTYYN---AHPFL----VDDSALRDARIKLILATRQVLRNGLGLIGVSAPETM 593


>gi|190572467|ref|YP_001970312.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558810|sp|B2FJW0|SYR_STRMK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190010389|emb|CAQ43997.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 562

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 198/562 (35%), Positives = 303/562 (53%), Gaps = 40/562 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ +V  +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTRDHGDFATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++  +S++    +YGRNL G G  V +E+VSANPTGP+HVGH R A +GD +A 
Sbjct: 92  LAPAAYQREAASVIKEAHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++  +G+   RE+Y NDAG QI  LALS   R +    + D   PEG Y G Y+  V + 
Sbjct: 152 VLDANGWNAKREFYYNDAGVQIENLALSTQARIKGIAPDQDG-WPEGGYRGEYIADVARA 210

Query: 213 L-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                  D   S ++   +   +  ++ ++V  +      DL A  +  DI+  E   + 
Sbjct: 211 YMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYA 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  RST  GDD DR + KS
Sbjct: 271 --DGKVAEAVAKLQASGHTYE----------------EGGALWLRSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG++TYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  V   +     +L
Sbjct: 313 DGTFTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG + TLR +++E G D+ R+ ++ RK    L FD    ++Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAE 504
           S +NPVFYVQYA+AR  S+ RQA++    L ++    N +       D + L L+  ++ 
Sbjct: 433 SNDNPVFYVQYAHARVCSLLRQAQE--KGLVYE--QGNGLANLGRLADDASLLLMNEISR 488

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLV 563
           YP V+E A +A EP+ +A YL +LA  FH  W HG   P L    A+ N KLT     L 
Sbjct: 489 YPEVVEAAGVALEPHLVAQYLRELAHAFH-TWYHG--TPVLVEDAADRNAKLT-----LA 540

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +GL ++GV +P +M
Sbjct: 541 CAARQVLANGLELLGVSAPEKM 562


>gi|303228773|ref|ZP_07315591.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516572|gb|EFL58496.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 577

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 201/580 (34%), Positives = 307/580 (52%), Gaps = 60/580 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +  D  ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAETLISHMDFDW-LERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G +YG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++   + LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDTLNAMNEADRVALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               +  D + SE   H  D   I   ++ L   G VYE                    L
Sbjct: 271 SNFRVTFDNWFSERTVHETDE--IHHSVEALKALGKVYE----------------KNGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + KY+RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      ++ VLL ++V L+RDG  +K+SKR+GD +TL  +++EVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q ++    + F  +       E+
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484

Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +F T     EL+LI  LAEYP  +  +   + P+++A YLYDLAS+FH  +  GR     
Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 --IIGVDPSLQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|256825648|ref|YP_003149608.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256689041|gb|ACV06843.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 547

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 191/573 (33%), Positives = 312/573 (54%), Gaps = 51/573 (8%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           D +I VE  I   + +ERP+D  HG  ++N A+ L++  G++P   AE++ AR++    V
Sbjct: 20  DGQIAVE--IPAEVRVERPKDRNHGDWASNIALQLAKKAGMNPREFAEIVAARLREAEGV 77

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            +V IAG GF+N+ L  +   ++  +IV     YG N    G  +N+EF+SANPTG +HV
Sbjct: 78  AAVDIAGPGFLNITLDAASAGELARTIVEGDATYGNNDALTGHTINLEFISANPTGHLHV 137

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A +GD++  L+A SG +VT EYYINDAGAQ++    SV               PE
Sbjct: 138 GHTRWAALGDSMRRLLAASGADVTAEYYINDAGAQMDKFGASVL------AAAKGEPTPE 191

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           G YPG Y++ +G   A +   +L   P+++ +   ++     M++ I+D L A  +  D+
Sbjct: 192 GGYPGEYVQELGA-AALEQRPDLAELPQDEAVTAARELGYPMMLQQIKDTLDAFGVHFDV 250

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           + SE   H      +   ++ L  QG+VYE                +   +  R+T   D
Sbjct: 251 WFSEASLH--SSGLVEKAVERLREQGHVYE----------------EGGAVWLRTTDFTD 292

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR L++++G  TYFA+D AY+  K +RGF   IY++G+DH GYV RL+A++AA  +  
Sbjct: 293 DKDRVLVRANGEPTYFASDAAYYLSKKDRGFTEKIYLLGADHHGYVNRLKAISAAAGDDP 352

Query: 379 AQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           A+ I + + +L+ +       ++SKRAG+ + LR +++ +G+D++R+ +        L+ 
Sbjct: 353 AKDIEIRIGQLISIN----GARLSKRAGNVVDLRDMLEWIGADAIRYSLGRYPADTPLEL 408

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           D  ++++Q+ +NPVFYVQYA+AR  ++ R   A  +     FD    N        D +E
Sbjct: 409 DGEELRKQTNDNPVFYVQYAHARTANVARLAAADGVSRAEGFDPSLLN--------DPTE 460

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  L ++PRV+  A   +EP+++A YL  LA  FH  +   R  PR      +  ++
Sbjct: 461 ATLLAALGDFPRVVAQAAELREPHRVARYLEGLAGAFHKWYDACRVRPR------DGEEV 514

Query: 556 TMM---RLQLVHAVASIINSGLNIIGVESPNEM 585
           T +   RL L  A   ++  GL+++GV +P  M
Sbjct: 515 TDLHRSRLMLNDATGVVLRRGLDLLGVSAPERM 547


>gi|160934061|ref|ZP_02081448.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753]
 gi|156866734|gb|EDO60106.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753]
          Length = 563

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 193/558 (34%), Positives = 302/558 (54%), Gaps = 37/558 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF-IAGKGFINL 91
            IE P D +HG  +TN AM+ ++   + P  IAE +    +        F IAG GFIN 
Sbjct: 38  TIETPADPSHGDFATNVAMVSAKAFHMAPRKIAEALSPYFEFSSTYFEKFEIAGPGFINF 97

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LSP +   +L  I      YGR+  GKG K+N+EFVSANPTGPMH+G+ R   +GD LA
Sbjct: 98  FLSPRFYAAVLQDIEALQDGYGRSDFGKGKKINVEFVSANPTGPMHMGNARGGALGDCLA 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVG 210
           +++  +GY+V+RE+YINDAG QI+  ALS+  RYQQ     ++  +PE  Y G  +    
Sbjct: 158 AVLDAAGYQVSREFYINDAGNQIDKFALSLDIRYQQIFKGEEAVPMPEDCYQGADILERA 217

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +E AD Y    L   +E+    + D+++   +  ++ DLK   I++D +  E   H  + 
Sbjct: 218 QEFADLYGDSCLEKSQEERQKALVDFALPKNIAKMQSDLKKYRIEYDTWFHESVLH--ND 275

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I+D +  L  +G  YE               +D   L +++T  G + D  L++ +G+
Sbjct: 276 GEIQDTLKILMEKGMTYE---------------LD-GALWYKATDFGAEKDEVLVRKNGN 319

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY + K++RGFD  I + G+DH G+V R++    AV    ++++V+L +LV+
Sbjct: 320 PTYFAADIAYHRNKFQRGFDRCIDIWGADHHGHVARMKGAMNAVGLDGSKLDVVLMQLVK 379

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R+G  ++MSKR G  I L  ++DEV  D+ RF+   R+ +  ++FD     +Q  +NP
Sbjct: 380 LVRNGEIVRMSKRTGKAIQLADLLDEVPVDAARFLFNMREANSQMEFDLDLAVQQDAQNP 439

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPR 507
           V+YVQYA+AR  SI +        L+ D   +    +E         EL LI HLA Y  
Sbjct: 440 VYYVQYAHARICSILKA-------LEKDGVVKRACSEEELLLLVQPEELSLIRHLAAYTG 492

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            + +A    +P ++  Y+ DLA++FH  ++  R       V+     L   RL L  AV 
Sbjct: 493 EVVSAAKDYDPARITRYVIDLANLFHKFYNACR-------VKGEEDSLCQARLTLCVAVK 545

Query: 568 SIINSGLNIIGVESPNEM 585
           ++I++ L +  + +P  M
Sbjct: 546 TVIHNVLTMFKISAPESM 563


>gi|253997684|ref|YP_003049748.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253984363|gb|ACT49221.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 552

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 191/561 (34%), Positives = 300/561 (53%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++ERP+   HG  +TN A+IL++PL  +P  IA  I+  +     +    IAG GFIN 
Sbjct: 25  IILERPKSADHGDFATNLALILAKPLKQNPRAIATQIIEALPTSEYIAKTEIAGAGFINF 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LSP   + ++  I+ +G +YGRN  GK  KV +EFVSANPTGP+HVGH R A VGD LA
Sbjct: 85  FLSPQSKQVVIKDILNAGAQYGRNSSGKQQKVQVEFVSANPTGPLHVGHGRGAAVGDCLA 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+  +G++VTRE+Y NDAGAQI+ L +SV  R +     ++S  PE  Y G Y+  +  
Sbjct: 145 RLLDANGWDVTREFYYNDAGAQIDNLTISVLARCKGISTEHES-FPENGYRGEYINDIAA 203

Query: 212 ELADKYSS-----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
               K++      E+    +   L  ++ +SV  +      DLKA  I+ D+F  E   +
Sbjct: 204 AFLAKHTVVADDIEVTASGDINDLNSIRAFSVAYLRHEQDLDLKAFQIKFDVFSLESALY 263

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   +  L + G+ YE                    L  ++T  GDD DR + K
Sbjct: 264 T--TGKVEQTVQALIKSGHTYE----------------QDDALWLKTTDFGDDKDRVMRK 305

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384
           +DG YTYF  D+AY   K+ RGF  +I   G+DH   + R+ A   A  +   +   + +
Sbjct: 306 TDGGYTYFVPDVAYHTDKWNRGFVRVINEQGADHHSTITRVRAGLQAMDIGIPQGWPDYV 365

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + R G  +K+SKRAG ++TLR +++EVG D+ R+ +  R+    L FD    + 
Sbjct: 366 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRADSQLVFDIDLARS 425

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS +NPV+Y+QYA+AR  S+  Q       L       N+ P  +  +T+ +Q    L+E
Sbjct: 426 QSNDNPVYYIQYAHARICSVLSQWNGDVSSLAH----VNLNPLTTAHETALMQ---RLSE 478

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP ++ N+     P+ +A YL +LAS  H +++        +F+   + +L + RL L+ 
Sbjct: 479 YPEIVANSATELAPHVVANYLKELASDLHSYYN------EYKFL-IEDEQLKLARLSLIS 531

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL+++GV +   M
Sbjct: 532 ATQQVLKNGLDLLGVTAKERM 552


>gi|256390399|ref|YP_003111963.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256356625|gb|ACU70122.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 556

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 191/557 (34%), Positives = 305/557 (54%), Gaps = 35/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERP++  HG  +TN A+ L++  G+ P  +AEL+  R++    +  V +AG GF+NL
Sbjct: 32  VTVERPKNRDHGDYATNVALQLTKAAGMPPRALAELLAERLREVEGIAGVDVAGPGFLNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+     ++  SIV  G +YGR+       VN+EFVSANPTGP+H+GH R A VGD L 
Sbjct: 92  KLAAGAAGELAKSIVEQGAQYGRSETFAAQIVNLEFVSANPTGPLHLGHTRWAAVGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHV 209
            L+  +G +VTRE+YINDAG Q+N   LS+      AL  N  ++P  +G Y G Y+K +
Sbjct: 152 RLLEAAGADVTREFYINDAGNQMNNFGLSL------ALRANGEEVPSGQGLYEGAYIKDL 205

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + + +++   L   P+E  +   +    +  +++ ++ L+      D++ SE   H  +
Sbjct: 206 AQAILEEHPV-LTQLPQEAQVEAFRTAGYKTQLRLQQESLEKFRTHFDVWFSEKTLH--E 262

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  + D LA QG+V+E                    +  R+T  GDD DR +++S+G
Sbjct: 263 SGAVEGVADRLAEQGHVFE----------------QDGAVWLRTTDFGDDKDRVIVRSNG 306

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388
             TYF+AD AY+  K +RG+   IY++G+DH GYV RL+A+AA   +   Q I VL+ + 
Sbjct: 307 ERTYFSADCAYYLNKRDRGYSPCIYMLGADHHGYVGRLKAMAACSGDDPEQDIEVLIGQF 366

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V++ +DG  +K+SKR G+ +TL  V+D +G D+ R+ +        L  D   +  Q  E
Sbjct: 367 VKMVKDGEEVKLSKRTGNIVTLDDVIDLIGVDAARYALARSSVDNELVLDVDLLTSQKAE 426

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA++R  S+ R A     +L FD         E      E  L+  LAE+PRV
Sbjct: 427 NPVYYVQYAHSRMASVKRNA----AELGFDKGTAEDFKPELLSHPREEALLAALAEFPRV 482

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A   ++ +++A YL D+A  +HG ++  R  P     +     L   R+ L  A  +
Sbjct: 483 IAQAAGLRKVHQVAHYLEDMAKKYHGFYTDCRILP---LGEDKPSDLNRARMWLAEATQT 539

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL+++GV +P  M
Sbjct: 540 VLRNGLDLLGVSAPERM 556


>gi|183984076|ref|YP_001852367.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M]
 gi|238690961|sp|B2HR81|SYR_MYCMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|183177402|gb|ACC42512.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M]
          Length = 550

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 200/591 (33%), Positives = 305/591 (51%), Gaps = 54/591 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK+    +  +  ++   L + +V+ERPR+  HG  ++N A+ L++ +G +P  
Sbjct: 4   ADLAELLKSTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I   +     + S  +AG GFINL L  S   KI+++I+ +G  +G + +    KV
Sbjct: 64  LAGWIAEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+  +   +  K + + L+ P+ +     ++  V  M  
Sbjct: 184 AAK------GEPTPDDGYAGTYINDIAARVLQK-APDALSLPDAQMHETFREIGVDLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   +  L   G +YE      K   T    
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE------KDGAT---- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSDG   Y A DLAY+  K ERGFD  IY++G+DH GY
Sbjct: 285 ------WLRSSSFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  E  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +IP     DT  L+L+ H         L ++PR+++ A   +EP+++  YL DLA  +H 
Sbjct: 448 LIP-----DTDHLELLSHEKEGVLLRTLGDFPRMLKTAASLREPHRVCRYLEDLAGDYHR 502

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P+         +L   RL L  A   +I +GL I+GV +P  M
Sbjct: 503 FYDSCRVLPQ---GDEEPTQLHTARLALCQATRQVIANGLGILGVTAPERM 550


>gi|258646587|ref|ZP_05734056.1| arginine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404001|gb|EEW97548.1| arginine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 554

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 294/555 (52%), Gaps = 38/555 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G  STNAAM  +R    +P  IAE IV  I   P V  + IAG GFIN +L
Sbjct: 35  LEIPKAKEFGDYSTNAAMQWARTAHKEPRAIAESIVKYIDA-PLVSKMEIAGAGFINFFL 93

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +   +   L +I+ +G  YG     K  K+ +E+VSANPTGP+H+GH R A  G  L +L
Sbjct: 94  AADTVYAELRNILSAGASYGDLPKDKKDKILVEYVSANPTGPLHIGHARGAAYGSALVNL 153

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +GY+V  EYY+NDAG+QI  LA SV  RY Q L   D+D+PE  Y G  +    K L
Sbjct: 154 LRAAGYDVYAEYYVNDAGSQIAHLAESVNARYLQ-LLGKDADVPEDGYHGYDIVETAKSL 212

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+     L+  EE  L + K  ++   + I++ DL   ++  D + SE   +   P  +
Sbjct: 213 IDREGDAYLSMDEEARLKVFKTVALNEKLSILKKDLADFHVTFDNWFSEKSLY---PKQV 269

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D +  L + GY+YE                        +T  GDD DR +++++G  TY
Sbjct: 270 DDALAALKKDGYLYE----------------KDGAWWLATTKNGDDKDRVVIRANGEPTY 313

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F +D+AY   K +RG++ +I + G+DH GY+ R+ +    +        ++L ++V L R
Sbjct: 314 FCSDIAYVPNKEKRGYNKLIDIWGADHHGYIIRIHSAMKFLGYDPEDFEIMLLQMVTLLR 373

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG P+KMSKR G  +TLR ++DEVGSD+ R+    R     +DFD    K+QS +NPV+Y
Sbjct: 374 DGQPVKMSKRTGQAVTLRELMDEVGSDAARYFFCSRTLDSQMDFDIDLAKKQSSDNPVYY 433

Query: 454 VQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +QYA AR  S+F QAK+    + D +   F +  + +E E D     L+  +  Y  +I+
Sbjct: 434 IQYANARIHSLFAQAKEAGVKWGDWEKTDFTK--LTEECELD-----LVKKMENYHMLID 486

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   + P ++A Y Y+LA +FH  +   R       +      +T  RL L+ AV  ++
Sbjct: 487 GAAKERAPQRIAKYAYELAGLFHHFYRECR-------ILGVEEGVTQARLGLITAVQHVL 539

Query: 571 NSGLNIIGVESPNEM 585
              L+I+GV +P  M
Sbjct: 540 VHALSILGVSAPERM 554


>gi|254821291|ref|ZP_05226292.1| arginyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 550

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 196/582 (33%), Positives = 298/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LKN    +  +  ++  +L   V +ERPR+  HG  ++N AM L + +G +P  
Sbjct: 4   ADLAELLKNTAAAVLAERGLDAAMLPATVTVERPRNPEHGDYASNLAMQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     V S  +AG GFINL L  S    ++++++  G  YG +    G  +
Sbjct: 64  LAGWLAEALAQADGVASAEVAGPGFINLRLEASAQAVVVNNVIDGGARYGHSDALAGHHI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAVVVREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K + + L+ P  +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGAYINDIAAQIVQK-APDALSLPAPEMHETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      + + +  L   G +YE      K   T    
Sbjct: 237 HIKESLHEFGTDFDVYTHEDAMHT--SGRVDEALAKLRETGNIYE------KDGAT---- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 285 ------WLRASAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA+ E  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAALGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++   L  D     
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL--GLIADTGNLG 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E       L+  L E+PRV+  A+  +EP+++  YL DLA  +H  +   R  P
Sbjct: 457 LLDHDKEG-----TLLRTLGEFPRVLTTASSLREPHRICRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 Q---GDEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550


>gi|294625197|ref|ZP_06703839.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600516|gb|EFF44611.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 569

 Score =  322 bits (826), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 195/560 (34%), Positives = 302/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++A +    DV  V IAG GFIN +
Sbjct: 39  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVAKVEIAGPGFINFH 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 99  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V   
Sbjct: 159 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 217

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 218 YLAGDTVDLEGHLVTGTKDPADLEAIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 277

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 278 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 319

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 320 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 379

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 380 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 439

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ Y
Sbjct: 440 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 496

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 497 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDAAAERD---AKLTLAVA 549

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 550 TQQVLANGLELLGVSAPEKM 569


>gi|326332896|ref|ZP_08199153.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325949254|gb|EGD41337.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 554

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 188/566 (33%), Positives = 293/566 (51%), Gaps = 36/566 (6%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           I +   +   + +ERPR   HG  +TN A+ L++  G +P  + E I A++K    V  V
Sbjct: 23  ITLPDGVPSTVTVERPRQKGHGDYATNVALQLAKKAGTNPRQLGEQIAAKLKESDGVADV 82

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GF+N+ +      K+   IV +G  YG N   KG  +N+EFVSANPTGP+H+G  
Sbjct: 83  EIAGPGFLNISVEAGAQGKLAGEIVAAGKAYGNNDSFKGHNINLEFVSANPTGPLHLGGV 142

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R A VGD L  ++  SG EVTREYY ND G QI+  A S+        +     +PE  Y
Sbjct: 143 RWAAVGDALGRVLEASGAEVTREYYFNDHGGQIDRFARSLL------AWAQGKPVPEDGY 196

Query: 202 PGVYLKHVGKELADKYSSEL-LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            G Y++ + K++  K  + L  + P+E    + +   V+ M   I+  L   N+  D++ 
Sbjct: 197 GGAYIEEIAKQVLAKEPNALEADDPQE----VFRAIGVELMFAEIKKSLHDFNVDFDVYF 252

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            ED+ H+     +   I+ L   G VYE                    +   +   GDD 
Sbjct: 253 HEDNLHK--SGAVERAIEKLRELGNVYE----------------KDGAIWLATEKFGDDK 294

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR ++K+DG+  YF+ DLAY+  K ERGFD    ++G+DH GYV R+ A+ AA  +   +
Sbjct: 295 DRVVIKADGNGAYFSGDLAYYLDKRERGFDRCFIMLGADHHGYVGRMMAMCAAFGDTPHE 354

Query: 381 -INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            + +L+ ++V L +DG P++MSKRAG  +T+  +V+ +G D+ R+ +    +   +D D 
Sbjct: 355 NLEILIGQMVNLLKDGQPMRMSKRAGTVVTIDDIVEAIGVDAARYALARYSSDSNIDIDL 414

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
               +    NPV+YVQY +AR   +   A D+   +D D F  +++         E +L+
Sbjct: 415 DLWAKADSANPVYYVQYVHARTCRMMANAADLGMAIDLDTFDPSLLTH-----AREGELL 469

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LAE PRV+  A   +EP+++A YL D A +FH  W    +   L         + + R
Sbjct: 470 RALAELPRVVATAAELREPHRVARYLEDTAGIFH-RWYDDDDCRMLPKGDEPVAPVNLAR 528

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV A  ++  +GL ++GV +P  M
Sbjct: 529 LALVSAARTVFANGLGLLGVSAPERM 554


>gi|289666332|ref|ZP_06487913.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 562

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 305/561 (54%), Gaps = 38/561 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++A +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRVLAQALLAALPASDDVAKVDIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQQLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAE 504
           S +NPVFYVQYA+AR  S+ RQA++     D      + + + +  D    L +++ L+ 
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD----QTHGLAELAHLDDEHSLAVMLELSR 488

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  
Sbjct: 489 YPEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAV 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL ++GV +P +M
Sbjct: 542 ATQQVLANGLELLGVSAPEKM 562


>gi|261856695|ref|YP_003263978.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837164|gb|ACX96931.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 588

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/608 (31%), Positives = 317/608 (52%), Gaps = 74/608 (12%)

Query: 20  CKIKVEKKILDRIV-----IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
            ++  E+ ++D  +     +  P+D +HG  +TN A+ +++P+G+ P   A+ ++  +  
Sbjct: 13  VRLMQEQGVMDAAINVTPALTVPKDPSHGDFATNIALQIAKPMGVPPRVAAQCLLEALTD 72

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              +  + IAG GF+N ++ P+    ++ +I+ +G  +G +  G+G KV +EFVSANPTG
Sbjct: 73  REGIKQIEIAGPGFLNFFVDPAAAFALIDTILAAGGTFGHSRFGEGKKVQVEFVSANPTG 132

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+HVGH R A  G  +A L+A  G++V REYY+NDAG Q++ LA+S++ RY +A     +
Sbjct: 133 PLHVGHGRGAAYGAVVADLLAAVGFDVYREYYVNDAGRQMHILAVSIWLRYLEACGAKLT 192

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELL--------NFPE-------------------- 226
               GY    Y+  + K L  ++   +         N P                     
Sbjct: 193 FPANGYKSEAYIFDIAKALKTEHGDTMFVSTEDVFTNLPPDEPQGGDKDVYIDTLIERAK 252

Query: 227 ----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               E     V D  + +++  IRDDL+   ++++ + SE      D   I   I  L  
Sbjct: 253 TLLGETRYRTVFDAGLNSILADIRDDLREFGVEYEQWYSEQTLE--DRGLIDRAIAKLEE 310

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G +YE                    L F+ST  GDD DR + + +G  TYFA+D+AY  
Sbjct: 311 RGQIYE----------------KEGALWFKSTEFGDDKDRVVRRDNGQSTYFASDIAYHM 354

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K+ERGFD +I + G+DH GYV R++A   A+   +++++V L +   LYR G  ++MS 
Sbjct: 355 EKFERGFDRVIDIWGADHHGYVPRVKAALTALGFDESRLDVSLVQFAILYRGGERVQMST 414

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R+G F+TLR +  EVG+++ RF  + R  ++ LDFD    K QS +NP++Y+QYA+AR  
Sbjct: 415 RSGSFVTLRELRQEVGNEAARFFYVMRAAAQHLDFDLDLAKSQSNDNPLYYIQYAHARVC 474

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEP 518
           S+FRQ       L    F  +     S +    ++ E  L   L+++   ++ A +  EP
Sbjct: 475 SVFRQ-------LPLRGFTHDAENGRSAYARLTESHEQALFKRLSQFGDTVQRAAVNLEP 527

Query: 519 YKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           + +  YL +LA  FH ++ +H        F+ A++  L   RL L+ A   ++ +GL ++
Sbjct: 528 HLIVHYLRELAQDFHAYYNAHA-------FLVADDAPLRDARLNLIAATRQVLANGLALL 580

Query: 578 GVESPNEM 585
           G+ +P EM
Sbjct: 581 GMSAPEEM 588


>gi|153872908|ref|ZP_02001666.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS]
 gi|152070626|gb|EDN68334.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS]
          Length = 585

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 202/614 (32%), Positives = 316/614 (51%), Gaps = 76/614 (12%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   L ++  K  + K I  +I +ER RD  HG  + N AM L++ L + P  +A  IV 
Sbjct: 9   LTQALTQLQSKGDIPKDIEPQIHLERTRDNQHGDFACNVAMALAKILKMRPRDLATQIVE 68

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           ++ K D  +  + IAG GFIN++LS      ++  I+ +   YG++ +G G  V IEFVS
Sbjct: 69  QLPKDDELIAKIEIAGPGFINVFLSQKAYDTVIEDILTAKETYGQSQVGAGQSVMIEFVS 128

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+HVGH R A  G  LA+L+  +G++V +EYY+NDAG Q++ LA+SV+ RY + L
Sbjct: 129 ANPTGPLHVGHGRGAAYGAALANLLTVAGFKVHKEYYVNDAGRQMDILAISVWLRYLE-L 187

Query: 190 YNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELL--NFP---------------- 225
                  P   Y G Y+  +   L      A +  S+++  N P                
Sbjct: 188 CGETITFPSNGYQGDYVWDIAASLHRERGDALRQDSKIVFDNVPPDINQGGDKELHVDAL 247

Query: 226 --------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                    E+   I+    +  ++  IRDDL+   + +D + SE +        +   I
Sbjct: 248 IDRSKQLLGEESYHIIFQRGLGIILAEIRDDLEQFGVVYDEWFSESNL--TTTHTVARAI 305

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           + L   G++YE                    L FRS+  GD+ DR +++ +G +TYF++D
Sbjct: 306 EQLKATGHIYE----------------QDGALWFRSSAFGDEKDRVVVRENGQFTYFSSD 349

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K ERGFD +I + G+DH GYV R++A   A+     ++ VLL +   LYR    
Sbjct: 350 IAYHLNKLERGFDYLINIWGADHHGYVSRVKAAMTALGADAQRLTVLLVQFASLYRGKER 409

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MS R+G+F TLR +  EVG D+ RF  + RK+ + L+FD    K Q  +NPV+YVQYA
Sbjct: 410 LQMSTRSGEFATLRELRSEVGRDAARFFYIQRKSEQHLNFDLELAKSQKNDNPVYYVQYA 469

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIEN 511
           + R   +FR+ +D           +N++   ++   S+L       L+V L+ Y  +IE 
Sbjct: 470 HTRIAGVFRELRD-----------KNLVWHHNKALLSKLTQAHERALLVMLSRYSEMIEA 518

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A  + EP++L +YL DLA  FH  +   +       +  ++  L   RL L  A   +++
Sbjct: 519 AAHSYEPHQLTYYLRDLAQQFHTCYDSHK-------ILIDDEDLRNARLSLSAACQQVLH 571

Query: 572 SGLNIIGVESPNEM 585
           +GL II V +P  M
Sbjct: 572 NGLTIISVSAPEVM 585


>gi|226360614|ref|YP_002778392.1| arginyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254782979|sp|C1AW17|SYR_RHOOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226239099|dbj|BAH49447.1| arginyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 550

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/587 (32%), Positives = 305/587 (51%), Gaps = 46/587 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L + + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAAKVLAERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +DS  IAG GF+N+ L+      I++ I+ +G  +G      G K+
Sbjct: 64  LAGWLADALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILEAGAAFGAGHTLDGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  +   ++L+ P  +   + +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAAQV-QQQRPDVLDLPAGEQQEVFRSIGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +++               
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L RDG+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480
           + M+       +D D         ENPV+YVQYA+AR  +I R A D+     D DF L 
Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVTDPDFSLL 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              +  QE +       LI  L EYPRV+ +A   +EP+++A YL +LA  +H  +   R
Sbjct: 459 ---IAEQEGD-------LIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACR 508

Query: 541 ENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P     Q +     L + RL L  A   ++ +GL ++GV +P +M
Sbjct: 509 ILP-----QGDEEVGPLHIARLALCDASRQVLANGLALLGVSAPEQM 550


>gi|238018516|ref|ZP_04598942.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748]
 gi|237864987|gb|EEP66277.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748]
          Length = 577

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 200/580 (34%), Positives = 306/580 (52%), Gaps = 60/580 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P     G  STN AM  +R    +P  IAE +++ +  D  ++   +AG GFIN 
Sbjct: 32  IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L    +   L +I+ +G +YG   +     + +E+VSANPTGP+HVGH R A  G  L 
Sbjct: 91  FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197
           +L+  +GY V  EYYINDAG QI+ +A+S+ +R+Q+            N D      D+P
Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210

Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249
           EG        Y G  +    K +A++   + LN   E   + + K+  ++  +  + + L
Sbjct: 211 EGALVFPENGYRGPDIIETAKTIAEREGFDKLNAMNEADRVALFKEEGLKEKLARLEETL 270

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               +  D + SE   H  D   I   ++ L   G VYE                    L
Sbjct: 271 SNFRVTFDNWFSERTVHEADE--IHHSVEALKALGKVYE----------------KDGAL 312

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             +ST  GDD DR +++ +G  TY AAD+AY + KY+RGF  MI + G+DH GYV R++A
Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             AA      ++ VLL ++V L+RDG  +K+SKR+GD +TL  +++EVG D+ R+  L R
Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K +S +NPV+Y+QYA+AR  SI+ Q ++    + F  +       E+
Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484

Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +F T     EL+LI  LAEYP  +  +     P+++A YL+DLAS+FH  +  GR     
Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHHAPHRIARYLFDLASMFHSFYRQGR----- 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   +  L   RL L+ A+A ++  GL I+G+ +P +M
Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577


>gi|308066957|ref|YP_003868562.1| arginyl-tRNA synthetase [Paenibacillus polymyxa E681]
 gi|305856236|gb|ADM68024.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 506

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/540 (35%), Positives = 293/540 (54%), Gaps = 39/540 (7%)

Query: 51  MILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           M L+R    +P  IAE ++A + +    ++S  IAG GFIN  L+ SYL  ++  +   G
Sbjct: 1   MQLTRIAKKNPRQIAEDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQG 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +YGR   G G KV IEFVSANPTG +H+GH R A VGD L +++ F+GY+VTREYYIND
Sbjct: 61  ADYGRIQEGAGKKVQIEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYKVTREYYIND 120

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG QI  ++ S+  RY Q L    +++PE  Y G  +    KEL  +    LL+      
Sbjct: 121 AGNQIYNMSRSIEARYLQEL-GQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDR 179

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
               +DY ++  +  I+ DL+   +  D + SE   +  +   +   ++ L  +  +YE 
Sbjct: 180 AAYFRDYGLEKELNKIKRDLELFRVPFDSWFSETSLY--ENGEVLKALNELRDREEIYE- 236

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                K   T             +T  GDD DR L+K+DG+YTY   D+AY + KY RG+
Sbjct: 237 -----KDGAT----------WLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGY 281

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D +I + G+DH GY+ R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T
Sbjct: 282 DTIINIWGADHHGYIPRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVT 341

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +++EVG D++R+    R     LDFD       S ENPVFYVQYA+AR  S++RQA+
Sbjct: 342 MEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAE 401

Query: 470 D----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           +    + P  + DL   + +  E E+D     L+  + E P  +  A     P+++  Y+
Sbjct: 402 EQGIAVLPLAEVDL---SKLTAEHEYD-----LLRKIGELPEEVSVAAANFAPHRMIRYV 453

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LAS+FH ++   R       V   +   T  RL L  AV + I + L ++GV +P  M
Sbjct: 454 YELASLFHSYYKAER-------VITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM 506


>gi|167561324|ref|ZP_02354240.1| arginyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167568554|ref|ZP_02361428.1| arginyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 594

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 204/611 (33%), Positives = 317/611 (51%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAER 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P+    VD+  IAG GFINL L+P+  + ++ ++   G  +G +    G +V
Sbjct: 73  IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASSRDHGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGQPVTGKRDVEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIEAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEASPDLLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D      ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVLNEWKSRYGATDALFANADLSPLDSK---QAMALMQKLAEYPDVLAHAAS 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL DLAS FH  ++  R       V  +   L   R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRDLASEFHSFYNAER-------VLVDEEALRTARVALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|238060801|ref|ZP_04605510.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882612|gb|EEP71440.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 554

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 191/557 (34%), Positives = 298/557 (53%), Gaps = 35/557 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R  +ERPR+  HG  ++  A+ LS+ +G+ P  +A  +  ++     + SV IAG GF+N
Sbjct: 31  RTTVERPRNPEHGDYASTLALQLSKKVGVPPRELATALAEQLGRAAGIKSVEIAGPGFLN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +   ++  SIV +G  YGR+    G K+N+EFVSANPTGP+H+G  R A VGD L
Sbjct: 91  IRLDAAAAGQLARSIVEAGPAYGRSTALAGQKINLEFVSANPTGPVHIGGVRWAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           + L+  +G +V  EYY NDAG+QI+  A S+               PE  Y G Y+  + 
Sbjct: 151 SRLLRATGADVGTEYYFNDAGSQIDRFARSLL------AAAKGEPAPEDGYGGAYIAEIA 204

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E+  +   ++L   ++    + +   V  M   I+  L+   ++ D + +E D H  D 
Sbjct: 205 TEVRTR-RPDVLELADDAAQEVFRVEGVALMFSEIKSSLRDFGVEFDTYFNEKDLH--DR 261

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +  L  QG+V+               D D    L R+T  GDD DR L KS+G 
Sbjct: 262 GELDQALARLREQGHVF---------------DTDGATWL-RTTDFGDDKDRVLRKSNGE 305

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELV 389
           +TYFAAD AY+  K ERGFD ++ ++G+DH GY+ R++A+AA   +  A  + +L+ +LV
Sbjct: 306 WTYFAADCAYYLDKRERGFDRVVIMLGADHHGYIGRMKAMAACFGDDPAVTLEILIGQLV 365

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG P++MSKRAG  +TL  +VD +G D+ R+ +    +   +D D       +++N
Sbjct: 366 NLLRDGQPVRMSKRAGTVVTLEDLVDAIGVDASRYALARYSSDSPIDIDVELWTRATRDN 425

Query: 450 PVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           PV+YVQY  AR  S+ R A ++     D + F   ++  + E D     L+  LAE+P V
Sbjct: 426 PVYYVQYVAARTASVGRNAAEVGLIRGDAEAFRPELLAHDKEND-----LLKALAEFPAV 480

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   +EP+++A YL +LA  +H  + + R  PR          L   RL L  A  +
Sbjct: 481 VATAAELREPHRVARYLEELAGAYHRFYDNCRILPR---GDEEVTDLHRARLWLNDATRT 537

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL ++GV +P  M
Sbjct: 538 VIANGLCLLGVSAPERM 554


>gi|109940178|sp|Q8PFR2|SYR_XANAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/560 (34%), Positives = 301/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++A +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVAKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  +    PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVANA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ Y
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 489

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 490 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDAAAERD---AKLTLAVA 542

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 543 TQQVLANGLELLGVSAPEKM 562


>gi|78049585|ref|YP_365760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038015|emb|CAJ25760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 569

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/560 (35%), Positives = 301/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ +VA +    DV  V IAG GFIN +
Sbjct: 39  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVDIAGPGFINFH 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 99  LAPTAYQRQVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  +    PE  Y G Y+  V   
Sbjct: 159 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVASA 217

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 218 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 277

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 278 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 319

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 320 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 379

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 380 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 439

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ Y
Sbjct: 440 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 496

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 497 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 549

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 550 TQQVLANGLELLGVSAPEKM 569


>gi|21244635|ref|NP_644217.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21110319|gb|AAM38753.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 569

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/560 (34%), Positives = 301/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++A +    DV  V IAG GFIN +
Sbjct: 39  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVAKVEIAGPGFINFH 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 99  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  +    PE  Y G Y+  V   
Sbjct: 159 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVANA 217

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 218 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 277

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 278 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 319

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 320 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 379

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 380 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 439

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ Y
Sbjct: 440 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 496

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 497 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDAAAERD---AKLTLAVA 549

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 550 TQQVLANGLELLGVSAPEKM 569


>gi|218283277|ref|ZP_03489332.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989]
 gi|218215967|gb|EEC89505.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989]
          Length = 544

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/554 (35%), Positives = 298/554 (53%), Gaps = 38/554 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+E P++  HG  S+N AM L+R L  +P  IA+ ++    ++  V ++ IAG GF+N 
Sbjct: 29  IVVETPKNKDHGDFSSNVAMQLTRQLHQNPRMIAQSLLDAFSLEM-VSNIEIAGPGFLNF 87

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS      ++S ++     YG+     G KV++E+VSANPTG +H+GH R A  GD+ A
Sbjct: 88  TLSKDRFSTVISDVLAQKENYGQQ-PSNGIKVDLEYVSANPTGSLHLGHARGAAWGDSCA 146

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  +GY+VTREYY+NDAG QI  LALS+  RY+QA     +++ +  Y G  ++  G 
Sbjct: 147 RIMKKAGYDVTREYYVNDAGNQITNLALSLNARYRQA-QGIPTEIGQDGYMGKDVEEKGY 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ELA +Y    L  P E+ L   +   ++  +  IR DL    +  D++ SE      D  
Sbjct: 206 ELAKEYPETYLE-PTEENLKFFRKEGIKFELDKIRKDLDRYRVHFDVWSSEQSIR--DAG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   I+ L  +GYVYE                    L F +T  GDD DR L K DGS 
Sbjct: 263 KVEAAINELNEKGYVYE----------------KDGALWFETTKFGDDKDRVLRKQDGSL 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY   D+AY   K +RGFD ++   G+DH GY+ RL+A   A+     +++V + ++VRL
Sbjct: 307 TYLVPDIAYHNDKCQRGFDMLVDFFGADHHGYIPRLKASMTALGNDADKLHVDIIQMVRL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             +G  +KMSKR G+  T+  + D+VG D+ R+  + R     LDFD     ++S ENPV
Sbjct: 367 VSNGEEMKMSKRLGNATTINELCDKVGVDAARYFFVQRALDSHLDFDIELATKKSNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +Y QYA+AR  SI +QA+DI     F          E   +  E++L+  L E+ +VI  
Sbjct: 427 YYAQYAHARMCSIQKQAQDIELATSF----------EDLTNEKEIELMKSLQEFNKVIVE 476

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
              +++ +K+  Y+ +LAS FH  ++        + V  +N +L+  RL LV A   ++ 
Sbjct: 477 TAQSRQVHKMCHYIQNLASKFHSFYN------VCKVVDRDNLELSSQRLALVKATQIVLA 530

Query: 572 SGLNIIGVESPNEM 585
           + L  IGVE+   M
Sbjct: 531 NALECIGVEAVESM 544


>gi|166713832|ref|ZP_02245039.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 562

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++  +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPASNDVTKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + RDG  +K+ KRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRDGEEVKLGKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501
           S +NPVFYVQYA+AR  S+ RQA++         +  + +   +E     D   L +++ 
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 485

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L+ YP V+E A    EPY++A YL +LA  FH  W H   N ++    A  R     +L 
Sbjct: 486 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 538

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +GL ++GV +P +M
Sbjct: 539 LAVATQQVLANGLELLGVSAPEKM 562


>gi|134093383|ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166232794|sp|A4G1E2|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|133737286|emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas
           arsenicoxydans]
          Length = 577

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 206/582 (35%), Positives = 310/582 (53%), Gaps = 62/582 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           + +ERPRD +HG ++ N AM +++PL  +P  +A+++VA +  +P     ++S  IAG G
Sbjct: 30  VTLERPRDPSHGDVACNLAMQIAKPLKKNPREVAQVLVAALLDNPANRDLIESAEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+P+  + ++ +++  G +YG++ +G G KV IEFVSANPTGP+HVGH R   +G
Sbjct: 90  FINLRLTPASRQSVVKTVLQQGAQYGKSNLGAGKKVIIEFVSANPTGPLHVGHGRQGALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D ++SL    GY VTRE+Y NDAG QI TLA SV  R  + L       PE  Y G Y++
Sbjct: 150 DAMSSLFDAQGYAVTREFYYNDAGVQIATLATSVQAR-ARGLKPGAEGWPESAYNGDYIQ 208

Query: 208 HVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +  + LA K  S     P      I     ++ ++V  + +    DL+A  ++ D +  
Sbjct: 209 DIANDFLAKKTVSASDGLPVTASGDIDDIESIRAFAVAYLRREQDLDLQAFGVKFDNYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +  +   +   +D L +    YE               +D   L  R+T   DD D
Sbjct: 269 ESSLY--NDGKVAATVDALIKADKTYE---------------LD-GALWLRTTDYRDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDG+YTYF  D+AY   K++RGF   I V GSDH G + R+ A   A  +   + 
Sbjct: 311 RVMKKSDGTYTYFVPDVAYHTVKWQRGFTQAINVQGSDHHGTIARVRAGLQALDIGIPQG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------EVGSDSVRFM 425
             + +L ++V + R+G  +K+SKRAG ++TLR +++                G D+VRF 
Sbjct: 371 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSNGETVEGQERDLTRGRDAVRFF 430

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPDLDFDLFPRN 483
           ++ RK      FD      QS ENPV+YVQYA+AR  S+  Q    D    LD DL P  
Sbjct: 431 LISRKADTEFVFDVDVALSQSDENPVYYVQYAHARICSVLAQWTDGDEAALLDVDLSPLT 490

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
             P+E+        L+  LAEYP  ++ A     P+++AFYL DLA+  H +++  R   
Sbjct: 491 A-PREAA-------LLAKLAEYPEALQRALEELGPHQVAFYLRDLAAELHSYYNAER--- 539

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V  ++  L M RL L+HA   ++ +GL +IGV +P  M
Sbjct: 540 ----VLVDDVALKMARLTLMHATRQVLRNGLALIGVSAPARM 577


>gi|320534480|ref|ZP_08034950.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133311|gb|EFW25789.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 561

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/563 (34%), Positives = 296/563 (52%), Gaps = 47/563 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  STN AM L++  G  P  +AEL+V R++    + SV +AG GF+N+ L
Sbjct: 35  VERPRNRDHGDWSTNVAMQLAKKAGTKPRDLAELLVPRLEALNGIASVEVAGPGFLNIRL 94

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  SIV +G  YGRN    G  +N+E+VSANPTGP+H+G  R A VGD+LA +
Sbjct: 95  DAASAGELARSIVEAGEAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           ++  G EVTREYY ND G QI+  A S+    +          PE  Y G Y+  + +++
Sbjct: 155 LSACGAEVTREYYFNDHGTQIDRFARSLLASAR------GEQTPEDGYGGAYISEIAQQV 208

Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            AD+ ++   +    P+ +   + +   V  M   ++ +L A     D+F  ED  H   
Sbjct: 209 TADELAAGRPDPATLPDVEATEVFRSRGVDLMFAAVKAELHAFRSDFDVFFHEDSLH--T 266

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   I  L  +G + E      +   T            R+T  GDD DR L+KSDG
Sbjct: 267 SGAVERAITRLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388
           +  YFAADLAY+  K ERG D  +Y+ G+DH GY+ R+ A+ AA  +     + +L+ +L
Sbjct: 311 NAAYFAADLAYYLDKRERGADCALYLFGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 370

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R+G+P++MSKRAG  + L  +VD VG D+ R+ +       ++D D   +   + +
Sbjct: 371 VNLVRNGVPVRMSKRAGTIVILEDLVDAVGVDAARYALARSSMDSMIDIDLDLLASSTSD 430

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH------L 502
           NPV+YVQYA+AR R++ R A +     D         P E+ F+ + L           L
Sbjct: 431 NPVYYVQYAHARTRNVARNAAEHGVSRD---------PNEAPFEPAALDDPADAALLGVL 481

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P  +  A   +E +++A YL  LA+ +H  +   R  PR      +     + RL L
Sbjct: 482 AQFPATVAQAASLREQHRVARYLEQLAAAYHAWYGATRVTPRGDDAVGSGH---VARLWL 538

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV  ++ +GL ++GV +P  M
Sbjct: 539 NDAVGQVLANGLGLLGVAAPERM 561


>gi|109895053|sp|Q3BNA3|SYR_XANC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/560 (35%), Positives = 301/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ +VA +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVDIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQRQVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  +    PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVASA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ Y
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 489

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 490 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 542

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 543 TQQVLANGLELLGVSAPEKM 562


>gi|188578900|ref|YP_001915829.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|109895055|sp|Q5H5M2|SYR_XANOR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689549|sp|B2SS22|SYR_XANOP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188523352|gb|ACD61297.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 562

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++  +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPDSNDVTKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLTGDTVDMEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + RDG  +K+ KRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRDGEEVKLGKRAGGYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501
           S +NPVFYVQYA+AR  S+ RQA++         +  + +   +E     D   L +++ 
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 485

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L+ YP V+E A    EPY++A YL +LA  FH  W H   N ++    A  R     +L 
Sbjct: 486 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 538

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +GL ++GV +P +M
Sbjct: 539 LAVATQQVLANGLELLGVSAPEKM 562


>gi|325928298|ref|ZP_08189500.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325541335|gb|EGD12875.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 562

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/560 (35%), Positives = 301/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ +VA +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVDIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  +    PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVASA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ Y
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 489

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 490 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 542

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 543 TQQVLANGLELLGVSAPEKM 562


>gi|91777021|ref|YP_546777.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91711008|gb|ABE50936.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 556

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 204/593 (34%), Positives = 309/593 (52%), Gaps = 51/593 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR------IVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  LK +L E+   ++V    LD       I +ERP++  HG  STN AM L++PL  +
Sbjct: 1   MSLALKAHLTEL---LQVAANSLDAGAAISAIQLERPKNTQHGDFSTNLAMTLAKPLRQN 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE ++  +     V+ V IAG GFIN YLSPS  + ++  I   G +YG N  G+ 
Sbjct: 58  PRAIAESLIKALPASEYVEKVEIAGAGFINFYLSPSAKQAVVREIQRQGEKYGTNDSGQS 117

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+HVGH R A VGD LA L+A +G+ VTRE+Y NDAGAQI+ L +S
Sbjct: 118 RKVQVEFVSANPTGPLHVGHGRGAAVGDCLARLLAANGWAVTREFYYNDAGAQIDNLTVS 177

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKD 235
           V  R  + +   D+  PE  Y G Y+  V      +E        +    + +    ++ 
Sbjct: 178 VQARC-KGITPGDAAWPENGYRGDYIADVAAAYMARETVIADDQAVTGKGDAEDAEAIRQ 236

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  +      DLKA  I  D+F  E   +R     +   +++L R G+ YE       
Sbjct: 237 FAVAYLRHEQDLDLKAFKINFDVFSLESALYR--EGKVESTVESLIRSGHTYE------- 287

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                      + L  R+T  GDD DR + K +G YTYF  D+AY   K++RGF+ +I  
Sbjct: 288 ---------QDEALWLRTTDFGDDKDRVMRKREGGYTYFVPDVAYHLDKWQRGFERVINE 338

Query: 356 MGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G+DH   + R+ A   A  V   +     +L ++V + R G  +K+SKRAG ++TLR +
Sbjct: 339 QGADHHSTITRVRAGLQALNVGIPQGWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDL 398

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIF 472
           ++EVG D+ R+ +  R+    L FD    + QS +NPV+Y+QYA+AR C  +     D+ 
Sbjct: 399 IEEVGCDATRYFLAARRADSQLVFDIDLARAQSNDNPVYYIQYAHARICSVLSEWGGDVA 458

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                DL   +++  E      E  L+  L E+P ++ NA     P+ +A YL DLA   
Sbjct: 459 SLAQADL---SLLETE-----HEAILMQRLGEFPELVANAAQELAPHMVATYLKDLAGDL 510

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H ++     N     V+  +  +T  R+ L+     ++ +GL ++GV +P +M
Sbjct: 511 HSYY-----NAHKFLVE--DADVTTARMALISVTRQVLRNGLELLGVSAPEKM 556


>gi|319948886|ref|ZP_08022998.1| arginyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437445|gb|EFV92453.1| arginyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 550

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 201/587 (34%), Positives = 305/587 (51%), Gaps = 46/587 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ ++  L  +  +   +  ++ + + +ERPR+  HG  +TN A+ L++ +G  P  
Sbjct: 4   ADLAAVIRAALIAVLTERGADTSVVPETVTVERPRNPEHGDYATNVALQLAKKIGSAPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A+ +   +  DP + S  IAG GF+N+ L       ++++++  G  YG      G +V
Sbjct: 64  LAQALADALAQDPGIASAEIAGPGFLNIRLDSGAQGSLVATVLEKGERYGYGDAMAGRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++  SG EVTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLEASGAEVTREYYFNDHGAQIDRFSRSL-- 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               A      + PE  Y G Y++ +  ++   +   +L+ PE++ L   +   V  M  
Sbjct: 182 ----AAAARGEETPEDGYAGAYIQDIAAQVMTAHPG-VLDMPEDQALETFRAAGVDLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            I+D L       D++  E+  F  G    +   I+ L   G +YE              
Sbjct: 237 HIKDSLAEFGTVFDVYTHENSMFTSG---AVDRAIETLKGNGNLYE-------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    RST  GDD DR +LKSDG   Y A D+AYF  K ERGFD  IY++G+DH G
Sbjct: 280 --SEGAWWLRSTAFGDDKDRVVLKSDGDAAYIAGDIAYFLDKRERGFDLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA+ +  A I VL+ ++V L RDG P+KMSKRAG  ITL  +VD +G D+ 
Sbjct: 338 YIARLKAAAAALGDDPATIEVLIGQMVNLVRDGEPVKMSKRAGTVITLDDLVDAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++     + +D D       + +NPVFYVQYA+AR  S+ R A D+           
Sbjct: 398 RYALIRSSVDQTMDIDLKLWTSATNDNPVFYVQYAHARLCSLARNAADL----------- 446

Query: 483 NVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            V  + ++     +  E  LI  + E+PRV+ +A   +EP+++A YL +LA  +H  +  
Sbjct: 447 GVTTEGADLALLVEDREGALIRTIGEFPRVVASAADLREPHRVARYLEELAGAYHRFYDT 506

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  P           L   RL L  A    + +GL +IGV +P  M
Sbjct: 507 CRVLP---MGDEEPGPLHAARLALSSATRQTLANGLRLIGVTAPERM 550


>gi|58580117|ref|YP_199133.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424711|gb|AAW73748.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 590

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++  +    DV  V IAG GFIN +
Sbjct: 60  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPDSNDVTKVEIAGPGFINFH 119

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 120 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 179

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V   
Sbjct: 180 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 238

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 239 YLTGDTVDMEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 298

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 299 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 340

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 341 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 400

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + RDG  +K+ KRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 401 HQMVTVMRDGEEVKLGKRAGGYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501
           S +NPVFYVQYA+AR  S+ RQA++         +  + +   +E     D   L +++ 
Sbjct: 461 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 513

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L+ YP V+E A    EPY++A YL +LA  FH  W H   N ++    A  R     +L 
Sbjct: 514 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 566

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +GL ++GV +P +M
Sbjct: 567 LAVATQQVLANGLELLGVSAPEKM 590


>gi|84622118|ref|YP_449490.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|109895054|sp|Q2P8B1|SYR_XANOM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|84366058|dbj|BAE67216.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 562

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++  +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPDSNDVTKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDMEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + RDG  +K+ KRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRDGEEVKLGKRAGGYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501
           S +NPVFYVQYA+AR  S+ RQA++         +  + +   +E     D   L +++ 
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 485

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L+ YP V+E A    EPY++A YL +LA  FH  W H   N ++    A  R     +L 
Sbjct: 486 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 538

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +GL ++GV +P +M
Sbjct: 539 LAVATQQVLANGLELLGVSAPEKM 562


>gi|148244251|ref|YP_001218945.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166200585|sp|A5CXW2|SYR_VESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146326078|dbj|BAF61221.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 572

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 191/586 (32%), Positives = 311/586 (53%), Gaps = 70/586 (11%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + I ++  +D A G  ++N AM+LS         +A+ I A      DV+ + I G GFI
Sbjct: 27  ENIRVDHSKDKAQGDFASNIAMLLSEQAQCSSKVLAQKIKANFPDSVDVEKIEIVGPGFI 86

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N ++S S    ++  I+  G  YG + IG G +V +EFVSANPTGP+HVGH R    G  
Sbjct: 87  NFFMSQSSNALVVEDIIKQGGNYGLSNIGMGQRVLLEFVSANPTGPLHVGHGRGVAYGAA 146

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A L+   G+EV  EYY+NDAG Q++ LA+SV+ RY +         P+  Y G Y+  +
Sbjct: 147 VAHLLRAVGFEVDCEYYVNDAGRQMDILAISVYLRYVET-----EQFPDNCYKGDYIFDI 201

Query: 210 GKELA-----DKYSSELLNFPE----------EKWLP---------------IVKDYSVQ 239
            K+++     D +++   +  E          E+++                 V D+++ 
Sbjct: 202 AKKISGVKKLDIFTNTCKDTSEWKVQKNSIDKERYIDDLIANCKLQLGSDYRKVFDFAIN 261

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +++  I+ DL    +++  + SE      D     +I+  L   GY+YE           
Sbjct: 262 SILSDIKIDLADFGVEYHQWFSEQSLV--DSGLSEEIVKKLQDLGYIYE----------- 308

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L FR+T  GDD+DR +++ +G +TYF+ D+AY   K+ERG+D +I + G+D
Sbjct: 309 -----KEGALWFRTTDFGDDLDRVVVRDNGIHTYFSYDIAYHLGKFERGYDRIINIWGAD 363

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R++A   A++    ++ +LL + V L+RDG  + MS R+G FITL+ + +EVG+
Sbjct: 364 HHGYIARVKASIKALNYNPDKLEILLVQFVNLFRDGKKVSMSTRSGSFITLKELREEVGN 423

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF  + RK+++ +DF+    K +S ENPVFY+QYAY R  S+ +Q      D+D  +
Sbjct: 424 DVVRFFYILRKSTQHMDFNLDLAKSKSNENPVFYIQYAYVRICSVLKQGMPFMADIDLLV 483

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +          E  LI  L  Y  +++++ +  EP+ LA YL  LA  FH ++++ 
Sbjct: 484 LNNEL----------ETLLIKELNRYKDILQSSALNYEPHVLACYLRKLAGYFHSYYNN- 532

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  F+  ++ KL   RL L+ AV  I+ +GLN++G+ +PN M
Sbjct: 533 -----CEFL-VDDDKLRNSRLLLITAVQQILANGLNLLGISTPNSM 572


>gi|88799634|ref|ZP_01115210.1| arginyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777719|gb|EAR08918.1| arginyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 561

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 193/566 (34%), Positives = 312/566 (55%), Gaps = 44/566 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R++++  RD AHG L++N A++L++P   +P  +AE ++A +  +  VD V IAG GFIN
Sbjct: 29  RVMVDNTRDKAHGDLASNLALMLAKPCQSNPRAVAEKLIAALPDNQIVDKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+     +I++ I+    ++G N  G+G KV +EFVSANPTGP+HVGH R A +GD+L
Sbjct: 89  FYLAGESSAEIVADILNRRAQFGTNDSGQGRKVQVEFVSANPTGPLHVGHGRNAALGDSL 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+  +G++ TRE+Y NDAGAQIN LA+SV  R  + L   D   P   Y G Y+  + 
Sbjct: 149 CRLLEANGWQPTREFYYNDAGAQINNLAISVQSRI-KGLTPEDDAWPADGYRGEYIIELA 207

Query: 211 KE-------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +        +AD    E+    +   L  + +++V  +      DLKA +++ D++  E 
Sbjct: 208 RSYMKGDQVIAD--DREVTAKADADDLDAILEFAVAYLRHEQDLDLKAFDVRFDVYSLES 265

Query: 264 DFHRGD--PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             +      + ++ ++DN    G+ YE                D   +  ++T  GDD D
Sbjct: 266 SLYSDGLVEATVKQLVDN----GFTYE----------------DDGAMWLKTTEFGDDKD 305

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KA 379
           R + K DG YTYF  D+AY K K+ERGFD +I V G+DH   V R+ A   A+ E   + 
Sbjct: 306 RVMRKKDGGYTYFLPDVAYHKAKFERGFDRVINVQGADHHSTVTRVRAGLQALKEGIPEG 365

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
             +  L +++ + R G  +K+SKRAG ++TLR +++E G D+ R+ ++ R+    + FD 
Sbjct: 366 FPDYALYQMIMVMRGGEEVKLSKRAGSYVTLRDLIEEAGRDATRYFLVSRRADAQITFDI 425

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
                ++ +NPV+Y+QYA+AR   +  +  +   +L +D         + + D +E +L+
Sbjct: 426 DLATSKNNDNPVYYIQYAHARVHGVLNRLAE--QNLSYDEAAGLAALGKLDLD-AERELM 482

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L  YP V+  A  A EP  +A YL DLA +FH ++     N     V+ ++++    R
Sbjct: 483 TQLRRYPDVVTAAADALEPAMIANYLKDLAGLFHSYY-----NSNKMLVEQDDQR--NAR 535

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  AVA ++ +GLN++GV +P  M
Sbjct: 536 LVLSKAVAQVLANGLNLLGVSAPESM 561


>gi|325919705|ref|ZP_08181707.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549813|gb|EGD20665.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 562

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 196/561 (34%), Positives = 303/561 (54%), Gaps = 38/561 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++P   +P  +A+ +VA +    +V  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKPARSNPRALAQALVAALPASDEVAKVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+PS  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LTPSAYQREVAHVIKQGPDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  +    PE  Y G Y+  V   
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVANA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   +  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTQDPADIESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A+     Q     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQALELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    ++Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARQQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAE 504
           S +NPVFYVQYA+AR  S+ RQA     +  +     + + + +  D    L ++V L+ 
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAL----EKGYKYEQAHGLAELARLDDEHSLNVMVELSR 488

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           Y  V+E A    EPY++A YL +LA  FH  W H   N +L    A  R     +L L  
Sbjct: 489 YAEVVEVAGQTLEPYQIAQYLRELAHAFH-TWYH---NTKLLVDDAAERD---AKLTLAV 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL ++GV +P +M
Sbjct: 542 ATQQVLANGLELLGVSAPEKM 562


>gi|118579453|ref|YP_900703.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502163|gb|ABK98645.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 563

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 202/587 (34%), Positives = 301/587 (51%), Gaps = 37/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S ++  L+      ++    +  + I  P +  HG  S N AM +++     P  +AE
Sbjct: 6   IASLVETALRAASAAQEITSPSIPAVTIGVPANPDHGDYSCNIAMQMAKAERRAPRQVAE 65

Query: 67  LIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I   +     + S   IAG GFIN ++SP+  +++L  I   G  YGR   G+  KV +
Sbjct: 66  TISRHLGDGKGLLSKTDIAGPGFINFFVSPAAWQRLLPEIESQGATYGRTATGEERKVQV 125

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L+  +G+ VTRE+Y NDAG QI  LALSV  R 
Sbjct: 126 EFVSANPTGPLHIGHGRGAAIGDTICRLLDAAGWNVTREFYYNDAGQQITNLALSVQARC 185

Query: 186 QQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  ND   P   Y G Y++ V      +E  D     +    + + L  +++++V +
Sbjct: 186 -LGIDTNDPRWPADGYQGEYIRDVAAAYLARETVDADDRHVTALGDPQNLDAIREFAVAS 244

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DLKA  +  D+F  E   +  D   + +++  L  +G+ YE            
Sbjct: 245 LRREQDLDLKAFGVHFDVFTLESSLY--DDGRVDNVVRQLVEKGHTYE------------ 290

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T  GDD DR + KSDG YTYF  D+AY   K+ERGF  +I   GSDH
Sbjct: 291 ----QEGALWLRTTEFGDDKDRVMRKSDGGYTYFVPDVAYHLAKWERGFTRVINEQGSDH 346

Query: 361 SGYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+     Q     +L ++V + R G  +K+SKRAG ++TLR ++DEVG
Sbjct: 347 HSTITRVRAGLQALDRGIPQGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVG 406

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + RK    L FD    KEQS +NPV+YVQYA+AR  SIF  A +    L  D
Sbjct: 407 RDATRFFFIMRKPDSQLVFDIDLAKEQSPDNPVYYVQYAHARICSIFENAVEKGYALPTD 466

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +   ES  +   ++L   LA  P  ++++    EP++L  YL DLA+ FH  ++ 
Sbjct: 467 AGSVRLELLESTEELQLIKL---LAALPNTVDDSARFFEPHRLTNYLTDLAASFHSFYNR 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   N  LT  RL L+   A  +N+ L+I+G+ +P  M
Sbjct: 524 NR-------VLTENSDLTGARLYLLKRTAQTLNNALSILGISAPERM 563


>gi|225022821|ref|ZP_03712013.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944428|gb|EEG25637.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 550

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 192/587 (32%), Positives = 302/587 (51%), Gaps = 46/587 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +D SS +     +I    +++  IL +++V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   SDLSSLINTEAHKILADRQLDVTILPEQVVVERPRNPEHGDYATNLALQIAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A L+V  +    ++ +V IAG GFIN+ L+ +   +I++ I+V+G  YG N +  G ++
Sbjct: 64  LASLLVDALSAHDEIATVDIAGPGFINIRLAAAAQGQIVADILVAGTTYGHNSLYSGERI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++A  G +VTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPVHLGSTRWAAVGDSLGRILAACGADVTREYYFNDHGRQIDRFTNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +         +PE  Y G Y+  +   +  +    +L   E       +   V+ M  
Sbjct: 184 AAK------GQPVPEDGYGGDYITEIAANIVAQEPG-VLQQSEPDMRETFRALGVELMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +D L   G +Y                
Sbjct: 237 HIKTTLHEFGVDFDVYFHENSLF--ESGAVDRAVDKLKENGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K+ERG    IY++G+DH GY
Sbjct: 279 FSNGAWWLRSTNYGDDKDRVVIKSDGDAAYIAGDIAYVANKFERGHTRSIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+      + VL+ +LV L RDG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 ISRLRAAAAAMGYNPNNVEVLIGQLVNLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-----PDLDFD 478
           + ++       LD D      QS ENPV+YVQYA+AR  S+ ++A  +      PDL   
Sbjct: 399 YSLVRSSVDSTLDIDLTLWANQSNENPVYYVQYAHARLCSLAKKAAAVGVTASKPDLSL- 457

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E  LI  L EYP V++ A   +EP+++A Y+ +LA  FH  +  
Sbjct: 458 -----------LTEDHEGTLIRTLGEYPTVVKAAAELREPHRIARYIEELAGTFHRFYDT 506

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  P+        + +   RL L  A   +I + L ++GV +P +M
Sbjct: 507 CQILPK---AGEQAQPIHTARLALATATRQVIANALGLLGVTAPEQM 550


>gi|317131750|ref|YP_004091064.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469729|gb|ADU26333.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 564

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 189/557 (33%), Positives = 303/557 (54%), Gaps = 36/557 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLY 92
           +E P D AHG  S N AM+ +R L + P  IAE ++  + +         +AG GF+N +
Sbjct: 39  VEVPADRAHGDFSANVAMVSARALKMPPRKIAEAVLGELCLKGTYFTHAEVAGPGFLNFF 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P++   IL+++   G  Y     G G K+ +E+VSANPTGPMH+G+ R   +GD LA+
Sbjct: 99  LAPAWYTAILNAVQTEGEGYTHTAQGGGKKIMVEYVSANPTGPMHMGNARGGALGDCLAA 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGK 211
           ++  +GY+VTRE+Y+NDAG QI   A+S+  RY Q     D+   PE  Y G  ++   K
Sbjct: 159 VLEHAGYDVTREFYVNDAGNQIAKFAVSLEARYFQIFRGEDAVPFPEDGYHGDDVRERAK 218

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E A +Y  + L+ PE++   ++  + ++  +K + DDL    I++D++  E   H  +  
Sbjct: 219 EFAAQYGKQYLDAPEDERRKVLAAFGIERNVKKLHDDLLKYRIEYDVWFRESVLH--EDG 276

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + D+I  L  +G  YE                    L + +T  G + D  L++++G  
Sbjct: 277 ELADVIALLKERGAAYE----------------KDGALWYAATRFGAEKDEVLVRANGIP 320

Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFAAD+AY + K+E RGF  ++ V G+DH G+V RL+    A+     +++V+L +LVR
Sbjct: 321 TYFAADIAYHRNKFEKRGFAKVVDVWGADHHGHVARLKGAMDAIGVGGDKLDVVLTQLVR 380

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  ++MSKR G  I+L  +++EV  D+ RF    R+ +  LDFD     EQS +NP
Sbjct: 381 LMRGGEVVRMSKRTGKAISLDDLLEEVPVDAARFFFNLREANSHLDFDLDLAVEQSSQNP 440

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRV 508
           V+YVQYA+AR  SI    K++  +   ++ PR   P+E      + E +LI HL   P  
Sbjct: 441 VYYVQYAHARIWSIL---KNLAAE---NIHPRACTPEEFGLLSASEERELIRHLGLLPNE 494

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+ A  A +P ++  Y+ DLA+ FH  ++         +V+  +  L   RL L   V  
Sbjct: 495 IDEAAKAYDPARITRYVLDLATKFHKFYN-------AHYVRGEDEPLMQARLNLCLCVRD 547

Query: 569 IINSGLNIIGVESPNEM 585
           ++   L+++ + +P  M
Sbjct: 548 VLKYVLDMLKITAPQTM 564


>gi|21233284|ref|NP_639201.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770242|ref|YP_245004.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993440|ref|YP_001905450.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|23822184|sp|Q8P455|SYR_XANCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81303810|sp|Q4UPN9|SYR_XANC8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558815|sp|B0RXM6|SYR_XANCB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21115122|gb|AAM43092.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575574|gb|AAY50984.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735200|emb|CAP53412.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 562

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 196/560 (35%), Positives = 302/560 (53%), Gaps = 36/560 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TNAAM+L++    +P  +A+ ++A +    DV  V IAG GFIN +
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVARVEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P+  ++ +  ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD+LA 
Sbjct: 92  LTPAAYQREVIHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  V K 
Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVAKA 210

Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++
Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + + +  L   G+ YE                +   L  +ST  GDD DR + KS
Sbjct: 271 --DGKVDEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385
           DG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +     +L
Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + Q
Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +NPVFYVQYA+AR  S+ RQA++    L +D     +       D   L L++ L+ Y
Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE--KGLKYDQ-THGMAELARLDDEHSLALMLELSRY 489

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+E A    EPY++A YL +LA  FH  W H   N ++    A  R     +L L  A
Sbjct: 490 AEVVELAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 542

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P +M
Sbjct: 543 TQQVLANGLELLGVSAPEKM 562


>gi|307825835|ref|ZP_07656051.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733143|gb|EFO04004.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 586

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 194/592 (32%), Positives = 315/592 (53%), Gaps = 61/592 (10%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I   I I+R RD  HG  ++N A++L++ +  +P  +AE ++A +  D  +  V +AG
Sbjct: 24  QEITPNITIDRTRDPQHGDFASNLALMLAKQVNTNPRQLAEKLIAALPQDTAIVKVELAG 83

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN ++ P+   +++  I   G ++G + +G G KV +EFVSANPTGP+HVGH R A 
Sbjct: 84  PGFINFFIDPTAQYQVIKQIHDQGPKFGLSNVGAGKKVQVEFVSANPTGPLHVGHGRGAA 143

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            G  +A L+  +G++V REYY+NDAG Q++ LA S++ RY +         P   Y G Y
Sbjct: 144 YGSAVADLLQATGFDVHREYYVNDAGRQMDILATSIWLRYLEEC-GEVVHFPSNAYRGEY 202

Query: 206 LKHVGKELADKYSSEL-----LNF----PEE-----------------KWL---PIVKDY 236
           ++ +   +    ++E      L F    P+E                 K L   P+ +D+
Sbjct: 203 VREIAWNIHKNANNEYRRPVELVFEDIPPDEPAGGDKEEHIDALIARAKTLLGAPLYQDF 262

Query: 237 SVQAMMKIIRD---DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  I+ D   DL    + +  + SE      D   +   ++ L   G++YE     
Sbjct: 263 FQIGLNNILEDIKIDLSEFGVDYQEWFSERRLM--DDGSVEKALERLRAAGHLYE----- 315

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            K   T           F    +GD+ DR +++ +G  TYFA+D+AY   K +RGFD +I
Sbjct: 316 -KDGAT----------WFACADLGDEKDRVVVRENGQSTYFASDIAYHMNKLDRGFDQII 364

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH GY+ R+ A   A+   ++++ VLL +   LYR    ++MS R+G+F+TLR +
Sbjct: 365 NIWGADHHGYIPRVRAAIQALGADESKLKVLLVQFASLYRGEEKVQMSTRSGEFVTLRQL 424

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            +EVG D+ RF  + R++ + +DFD      +S ENPVFYVQYAYAR  S+ RQ  +   
Sbjct: 425 RNEVGKDAARFFYVMRRSEQHMDFDLKLATSKSNENPVFYVQYAYARVCSVLRQLDEKNW 484

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           + +  L   N+     E +T+   L+  LA YP V+E A +  EP++L  YL +LA+ FH
Sbjct: 485 ERNLPLGMENLALLTEEHETN---LLGTLARYPEVLERAALQYEPHQLIQYLRELANEFH 541

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++     N     V+  + K+   RL L+ AV  I+ +GL+++ + +P  M
Sbjct: 542 TYY-----NAHQFLVE--DAKIRNARLNLICAVKQILANGLSLLNINTPEAM 586


>gi|120553753|ref|YP_958104.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166232799|sp|A1TYU8|SYR_MARAV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120323602|gb|ABM17917.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 561

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 195/562 (34%), Positives = 304/562 (54%), Gaps = 50/562 (8%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           +D +HG  + N A++ S+  G  P  +AE +VA +  +  V+ V IAG GFIN ++S + 
Sbjct: 36  KDKSHGDYACNIALVASKAAGCPPRKLAEALVAALPENSAVEKVEIAGPGFINFFMSTAS 95

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              I+++I+    ++GRN  G G +V +EFVSANPTGP+HVGH R A +GD L  L+  +
Sbjct: 96  AFGIVNTILDEAQQFGRNNSGNGERVQVEFVSANPTGPLHVGHGRGAAIGDCLCRLLEAN 155

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE----- 212
           GY+VTRE+Y NDAGAQIN LALSV  R  + L   D   PE  Y G Y+  V        
Sbjct: 156 GYDVTREFYYNDAGAQINNLALSVQSRV-KGLTPEDESWPEDGYRGDYIVDVANAYLAGE 214

Query: 213 --LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             +AD         PE++    +++++V  + +    DLKA  +Q D++  E   +  + 
Sbjct: 215 TVVADDREVTAKADPEDR--DAIREFAVAYLRREQDLDLKAFGVQFDVYFLESSLY--ED 270

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   ++ L   GY YE                    +  ++T  GDD DR + K DG 
Sbjct: 271 GKVEATVERLKANGYTYE----------------QDGAMWLKTTEFGDDKDRVMRKKDGG 314

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-----NVLL 385
           YTYF  D+AY   K++RGF  +I   G+DH   V R+ A   A+   KA I     + +L
Sbjct: 315 YTYFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQAL---KADIPQGWPDYVL 371

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V + R G  +K+SKRAG ++T+R ++DEVG D+ RF +  R+    L FD    + Q
Sbjct: 372 HQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGRDATRFFLAARRVDSQLTFDIDLARSQ 431

Query: 446 SKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           + ENPV+Y+QYA+AR  S+ R+  A+ +   ++  +   +++  +      E +L   LA
Sbjct: 432 TNENPVYYIQYAHARICSVLRKLAAEGVQRGMNECVGELSLLTLD-----EEKELANQLA 486

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +YP +I N+   +EP+ L  YL +LA  FH +++  +       V   +  L   R+ L 
Sbjct: 487 KYPELIANSAAQREPHHLTHYLRELAGQFHTYYNAHK-------VLIEDTALRDARVSLY 539

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  +I +GL+++GV +P EM
Sbjct: 540 LAVRQVIANGLDLLGVSAPEEM 561


>gi|302869607|ref|YP_003838244.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315503931|ref|YP_004082818.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
 gi|302572466|gb|ADL48668.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315410550|gb|ADU08667.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 555

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 187/561 (33%), Positives = 300/561 (53%), Gaps = 42/561 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  +ERPR+  HG  ++  A+ LS+ +G+ P  +A  +   +   P + SV IAG GF+N
Sbjct: 31  QTTVERPRNPDHGDYASTLALQLSKKVGVPPRELATALADELAKAPGIKSVEIAGPGFLN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +   ++   IV +G  YGR+    G ++N+EFVSANPTGP+H+G  R A VGD L
Sbjct: 91  VRLDAAAAGQLAKVIVEAGPAYGRSDTLAGQRINLEFVSANPTGPVHIGGVRWAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           + L+  +G +V  EYY NDAG+QI+  A S+    +          PE  Y G Y+  + 
Sbjct: 151 SRLLRATGADVGTEYYFNDAGSQIDRFARSLLAAAK------GEPAPEDGYGGAYIAEIA 204

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E+  +   ++L+ PE+    + ++  VQ M   I+  L+   ++ D + +E D H  D 
Sbjct: 205 AEVV-RLRPDVLDLPEDAAQEVFRNEGVQLMFAEIKSSLRDFGVEFDTYFNEKDLH--DG 261

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +D L  QG+V+E                       R+T  GDD DR L KS+G 
Sbjct: 262 GALDAALDRLREQGHVFE----------------SEGATWLRTTEFGDDKDRVLRKSNGE 305

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELV 389
           +TYFAAD AY+  K ERGFD ++ ++G+DH GY+ R++A++A   +  A+ + +L+ +LV
Sbjct: 306 WTYFAADCAYYLNKRERGFDRVVIMLGADHHGYIGRMKAMSACFGDDPARNLEILIGQLV 365

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG P++MSKRAG  +TL  +VD +G D+ R+ +        +D D         +N
Sbjct: 366 NLVRDGAPVRMSKRAGTVVTLEDLVDAIGVDAARYALARYSADSPIDIDVELWTRAKNDN 425

Query: 450 PVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           PV+YVQY  AR   + R A +I     D   F   ++  + E      +L+  LAE+P V
Sbjct: 426 PVYYVQYVAARTAGVARNAAEIGLTRGDAAAFQPELLGHDKEN-----ELLKALAEFPAV 480

Query: 509 IENATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVH 564
           +  A   +EP+++A YL + +A  +H  + + R  P+       + ++T     RL L  
Sbjct: 481 VATAAELREPHRVARYLEESVAQAYHRFYDNCRIAPQ------GDEEITDTHRARLWLND 534

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   +I +GL+++GV +P  M
Sbjct: 535 ATRVVIANGLHLLGVSAPERM 555


>gi|325002812|ref|ZP_08123924.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 550

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 194/556 (34%), Positives = 280/556 (50%), Gaps = 44/556 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  +TN A+  ++  G++P  +A  +   +     V    IAG GFINL L
Sbjct: 35  VERPRNPEHGDYATNIALRTAKKAGVNPRELATWLAEELATRDGVAGAEIAGPGFINLRL 94

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      I+  ++  G  YG      GT++N+EFVSANPTGP+H+G  R A VGD L  +
Sbjct: 95  AADAQGAIVGEVLAQGERYGTGDELAGTRMNLEFVSANPTGPIHLGGTRWAAVGDALGRV 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +   G +VTREYYINDAGAQI+  A S+      A        PE  Y G Y+  + + +
Sbjct: 155 LVARGADVTREYYINDAGAQIDHFAASLIAAATGA------PTPENGYGGAYIGEIAERV 208

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                  +L  PE +     +   V  M++ +R  L       D++ SE   H  +   +
Sbjct: 209 V-AAEPGILELPEAERHQAFRRTGVALMLEEMRRSLHEFGTDFDVWFSELSLH--ESGAV 265

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D +  L   G +YE                       RST  GDD DR ++KSDG+  Y
Sbjct: 266 EDSVRQLKDDGSLYE----------------KDGAWWLRSTEQGDDKDRVVIKSDGTPAY 309

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            A D+AY + K  RGFD  +Y++G+DH GY  RL+AVAAA  +  + + VL+ ++V L R
Sbjct: 310 VAGDIAYLRDKRGRGFDRCLYMLGADHHGYTVRLKAVAAAFGDDPSVVEVLIGQMVNLIR 369

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
            G P++MSKRAG  +TL   VD VG D+ R+ ++       LD D   V  ++ ENPVFY
Sbjct: 370 AGEPVRMSKRAGTIVTLEDFVDAVGVDAARYSLVRSSVDSTLDIDLDLVSSRTSENPVFY 429

Query: 454 VQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           VQYA+AR  S+ R A D  + P   + L   +           E  LI  L E+P V+  
Sbjct: 430 VQYAHARLSSLARNAADLGVEPGDGYGLLVHD----------REGDLIRTLGEFPDVVRT 479

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASI 569
           A   +EP+++A YL  LA  +H  +   R  P     Q +     L   RL L  A   +
Sbjct: 480 AAELREPHRVARYLESLAGAYHKFYDSCRVLP-----QGDEEISDLHRARLSLCGAARRV 534

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P  M
Sbjct: 535 LANGLGLLGVGAPERM 550


>gi|254187942|ref|ZP_04894454.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254196876|ref|ZP_04903300.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|157935622|gb|EDO91292.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|169653619|gb|EDS86312.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 594

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 203/611 (33%), Positives = 319/611 (52%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    G +V
Sbjct: 73  IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALTAAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|220927743|ref|YP_002504652.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254782954|sp|B8I592|SYR_CLOCE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219998071|gb|ACL74672.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 564

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 195/558 (34%), Positives = 304/558 (54%), Gaps = 34/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I IE PR+  HG  STN AM +++     P  IA++I+  I  D   +D V  AG GFIN
Sbjct: 37  ITIEIPREKGHGDFSTNVAMQITKAAKKAPRQIADIIIKNIVTDGTYIDKVTCAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L  SYL + ++ I      YGR  IG G KV +EFVSANPTGP+H+G+ R   +GD +
Sbjct: 97  FTLDNSYLYETVNIIQQEKENYGRINIGNGKKVMVEFVSANPTGPLHMGNARGGALGDCI 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHV 209
           AS++  +GY VTRE+ INDAG QI     S+  RY Q +   D+ + PE  Y G  +   
Sbjct: 157 ASVLDAAGYNVTREFLINDAGNQIEKFGTSLEARYIQLIKGEDAIEFPEDGYQGEDITEH 216

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K+    +  + +N   E+   +  D+++   +  I++ L++  I  DI+ SE   H+  
Sbjct: 217 MKDFIAIHGDKYINTDSEERKKVFVDFALPRNIARIKEGLESYGIHFDIWFSEQSLHK-- 274

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRPLLKSD 328
              + + I  L  +G                 C ++++  L+ + +++G + D  L++++
Sbjct: 275 SGEVAETIQLLKDRG-----------------CTVEKEGALWLKGSVIGSEKDEVLVRNN 317

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGF+ +I + G+DH G+V R++A  AA+     +++V+L +
Sbjct: 318 GIPTYFAADIAYHRNKFEKRGFEWVINLWGADHHGHVARMKAAMAALGINPDKLDVVLFQ 377

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRLYR+G   +MSKR G  I+L  +V+EVG D VR+    + +   LDFD     +QS 
Sbjct: 378 LVRLYRNGEIARMSKRTGKSISLMDLVEEVGRDGVRYFFNTKASGSHLDFDLDLAVKQSN 437

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ENPVFYVQYA+AR  S+F+    +       +   N I  E      EL+LI  L+EYP 
Sbjct: 438 ENPVFYVQYAHARICSMFK----LLESEGIKVPSANAIKAELLDKPEELELIRKLSEYPD 493

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  +    EP +L  Y++D+AS FH  ++  R       V+    +L   RL LV    
Sbjct: 494 EVRISAETLEPSRLTRYVHDVASTFHSFYNACR-------VRGEEEELMQARLVLVDCTR 546

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ + L+++ + +P  M
Sbjct: 547 IVVKNVLDLLSITAPERM 564


>gi|294648857|ref|ZP_06726313.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825248|gb|EFF83995.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 599

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 193/596 (32%), Positives = 309/596 (51%), Gaps = 72/596 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I     +YGR+ +    K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAVLDQIEAQKDQYGRSQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L       P+  Y G Y+K + +E+
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            +K                     Y+  L        L+  +EK +              
Sbjct: 211 INKDGNAYVRAVADIYKDVPEDVQYAEALDAEGNKVVLSGDKEKHIDGLITNSQQQLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  D + SE          I + +  L ++GY+YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFDEWFSEASL----TEKIDEALATLDQRGYLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KEGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR  SI  +AK
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAK 490

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +    + FD+     +      D +E +++  LA YP ++  A    EP+++  YL DLA
Sbjct: 491 E--KGIAFDVASARQVANLLTLD-AETEILAKLAAYPEIVIRAANVCEPHQIGNYLKDLA 547

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++FHG ++       ++FV   N  L+  RL L   V  ++ +GL ++GV +P  M
Sbjct: 548 ALFHGWYAQ----DGVKFVDEANIPLSQARLLLSINVQQVLRNGLELLGVSAPEAM 599


>gi|226952204|ref|ZP_03822668.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837042|gb|EEH69425.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 599

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 193/596 (32%), Positives = 309/596 (51%), Gaps = 72/596 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I     +YGR+ +    K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAVLDQIEAQKDQYGRSQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L       P+  Y G Y+K + +E+
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            +K                     Y+  L        L+  +EK +              
Sbjct: 211 INKDGNTYVRAVADIYKDVPEDVQYAEALDAEGNKVVLSGDKEKHIDGLIANSQQQLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  D + SE          I + +  L ++GY+YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFDEWFSEASL----TEKIDEALATLDQRGYLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KEGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR  SI  +AK
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAK 490

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +    + FD+     +      D +E +++  LA YP ++  A    EP+++  YL DLA
Sbjct: 491 E--KGIAFDVASARQVANLLTLD-AETEILAKLAAYPEIVIRAANVCEPHQIGNYLKDLA 547

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++FHG ++       ++FV   N  L+  RL L   V  ++ +GL ++GV +P  M
Sbjct: 548 ALFHGWYAQ----DGVKFVDEANIPLSQARLLLSINVQQVLRNGLELLGVSAPEAM 599


>gi|167835227|ref|ZP_02462110.1| arginyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 594

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 204/611 (33%), Positives = 316/611 (51%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAER 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P     VD+  IAG GFINL L+P+  + ++ ++   G  +G +   +G +V
Sbjct: 73  IVAALTTQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASERERGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDAEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VAYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIEAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      V   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEASPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L    + P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVLNEWKSRYGATDALLPGAELSPLDSK---QAMALMQKLAEYPDVLAHAAN 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  +       R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARVALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|163840172|ref|YP_001624577.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|189083543|sp|A9WNA7|SYR_RENSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|162953648|gb|ABY23163.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 549

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/557 (33%), Positives = 308/557 (55%), Gaps = 44/557 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERP++  HG  +TN A+ L++P GL+P  +AE++ +R++    V +V IAG GF+N+
Sbjct: 34  VRVERPKNRDHGDWATNIALQLAKPAGLNPRAVAEILKSRLEAIEGVAAVDIAGPGFLNI 93

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L  +    +  +IV +G +YG N    G  +N+EFVSANPTGP+H+ H R A VGD++A
Sbjct: 94  TLDAAAAGALAKNIVHAGSQYGENQALTGQVINVEFVSANPTGPLHLAHTRWAAVGDSVA 153

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+  SG  VT EYYINDAG+Q+N    SV    +          PEG YPG Y+  + +
Sbjct: 154 RLLKASGATVTSEYYINDAGSQMNNFGASVLAAIK------GEPTPEGGYPGAYITELAQ 207

Query: 212 ELA--DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           ++     Y +EL    +E  LP+V+  +  A +  I++ L    +  D+F SE + H   
Sbjct: 208 QVVRDHPYVTELT---DEAALPVVRAAAYLAQLADIKETLNDFGVHFDVFFSEQELH--S 262

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +D L  QG+V+                     +  R+T   DD DR L++++G
Sbjct: 263 TGAVEKAVDRLRGQGHVF----------------YQDGAIWLRTTDFTDDKDRVLIRANG 306

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388
             TYFAAD AY+  K +RGF   IY++G+DH GY+ RL+A+AA   +  A+ I VL+ ++
Sbjct: 307 EPTYFAADAAYYLSKKDRGFVEKIYLLGADHHGYIGRLKAIAACAGDDPARNIEVLIGQM 366

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V +  +G   ++SKRAG+ + LR +++ +G+D++R+ +        L  +  ++++ S +
Sbjct: 367 VSV--NGA--RLSKRAGNIVELRDLLNWLGADALRYSLGRSPADSPLALEPEQLQKASND 422

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR +++ R A+     +D   F  +++   +E +     L+  L  +P V
Sbjct: 423 NPVFYVQYAHARTKAVDRNAE--AAGVDRSAFEASLLTHPTESN-----LLAQLGAFPSV 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A   +EP+++A +L  +A  +H  +   R  P   F       L   RL L  A   
Sbjct: 476 VAEAAKFREPHRVARHLEVVAGTYHRWYDACRVTP---FAGEEITDLNRTRLWLNDATGQ 532

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL+++GV +P  M
Sbjct: 533 VLANGLDLLGVSAPERM 549


>gi|262374635|ref|ZP_06067908.1| arginyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310425|gb|EEY91516.1| arginyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 599

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 193/596 (32%), Positives = 308/596 (51%), Gaps = 72/596 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I     +YGR+ +    K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAVLDQIQAQKDQYGRSQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L       P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQILVFPKNAYQGDYVKEIAQSI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAHVRPVADIYKDVPEDVQYAEELDADGNKVVLSGDKEKHIDGLIANSQQHLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  D + SE          I + +  L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFDQWFSEASL----ADKIDEALATLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR  SI  +AK
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAK 490

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +    + FD             +T E +++  LA YP ++  A    EP+++  YL DLA
Sbjct: 491 E--KGIVFDATNARQFADLLTLET-ETEILAKLAAYPEIVVRAANVCEPHQIGNYLKDLA 547

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++FHG ++       ++FV   N  L+  RL L   V  ++ +GL ++GV +P+ M
Sbjct: 548 ALFHGWYAQ----DGVKFVDETNTSLSQARLLLSTNVQQVLRNGLELLGVSAPDSM 599


>gi|167736849|ref|ZP_02409623.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 594

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 199/591 (33%), Positives = 310/591 (52%), Gaps = 62/591 (10%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFI 83
           +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE IVA +   P+    VD+  I
Sbjct: 33  VLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQIVAALTAQPEAAGLVDAAEI 92

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL L+P+  + ++ +++  G  +G +    G +V +EFVSANPTGP+HVGH R 
Sbjct: 93  AGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRVLLEFVSANPTGPLHVGHGRQ 152

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   R  + L   D+  PE  Y G
Sbjct: 153 AALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNG 211

Query: 204 VYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            Y+  +      G+ +A      +    + + L  ++ ++V  + +    DLKA  ++ D
Sbjct: 212 EYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFD 271

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      +   +D L   G  YE                    L  R+T  G
Sbjct: 272 QYYLESSLY--TEGRVEKTVDALIAAGMTYE----------------QEGALWLRTTDEG 313

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VS 375
           DD DR + K+DG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      + 
Sbjct: 314 DDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIG 373

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-----------------DEV- 417
             K   + +L ++V + RDG  +K+SKRAG ++T+R ++                 DE  
Sbjct: 374 IPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEAT 433

Query: 418 ---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
              G D+VRF ++ RK      FD     +Q+ ENPV+YVQYA+AR  S+  + K  +  
Sbjct: 434 ITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGA 493

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D  L   ++ P +S+     + L+  LAEYP V+ +A     P+ +AFYL +LAS FH 
Sbjct: 494 TDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHS 550

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V  + +     R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 551 FYNAER-------VLVDEQAPRTARVALLAATRQVLENGLAMLGVSAPSKM 594


>gi|94500579|ref|ZP_01307110.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427369|gb|EAT12348.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 607

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 308/565 (54%), Gaps = 42/565 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I+++  +D AHG  ++N AM+ S+  G++P   AE IV  +   P +    IAG GFIN
Sbjct: 75  KIMVDNTKDKAHGDYASNIAMVSSKMAGMNPRQWAEEIVNALPDSPILKQAEIAGPGFIN 134

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++ +    ++ +I+ +   +G N  GKG  V +EFVSANPTGP+HVGH R A VGD +
Sbjct: 135 FFVTEAASFSVVETILDAKETFGHNDSGKGQSVQVEFVSANPTGPLHVGHGRGAAVGDCI 194

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           + L+  +G++VTRE+Y NDAGAQI+ LALSV  R  + L  +D+  PE  Y G Y+  + 
Sbjct: 195 SRLLEANGWKVTREFYYNDAGAQIDNLALSVQARC-KGLTPDDAGWPEDGYRGEYILDLA 253

Query: 211 KEL--ADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                 D   S   +F   K    L  ++ ++V  + +    DLKA  +  D++  E   
Sbjct: 254 NSFMNGDTIESADQSFTGTKDADDLEGIRHFAVAYLRREQDLDLKAFEVDFDVYFLESSL 313

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + + + NL + GY YE                D   L  ++T  GDD DR + 
Sbjct: 314 YA--DGKVEETVQNLIKNGYTYE----------------DGGALWLKTTEFGDDKDRVMR 355

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAVSEKKAQI 381
           K DG YTYF  D+AY + K++RGF  +I   G+DH   + R    L+A+ A + E     
Sbjct: 356 KKDGGYTYFVPDVAYHQNKWQRGFKKVINEQGADHHSTITRVRAGLQALQAGIPE--GYP 413

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           + +L ++V + + G  +K+SKRAG ++TLR ++DEVG D+ R+ +  R  S  L FD   
Sbjct: 414 DYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLIDEVGRDATRYFLAARAPSSQLTFDIDL 473

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            + QS +NPV+Y+QYA+AR  SI R+ +      D      N + +    +  + +L+ +
Sbjct: 474 ARSQSNDNPVYYIQYAHARICSILRKLESEGQSWD----QHNGLSKLDRLEEDQEKLLAN 529

Query: 502 -LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            LA +P V+  A     P+++A YL++LAS FHG++++ +           ++ L   R+
Sbjct: 530 KLARFPEVVAIAGEQSAPHQVANYLHELASDFHGYYNNHK-------TIVEDQDLRDARI 582

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  AV  ++ +GL ++G+ +P EM
Sbjct: 583 ALTQAVRQVLFNGLYLLGIAAPEEM 607


>gi|53718023|ref|YP_107009.1| arginyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126438772|ref|YP_001057463.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126452586|ref|YP_001064713.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134279771|ref|ZP_01766483.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167717831|ref|ZP_02401067.1| arginyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167813955|ref|ZP_02445635.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167822473|ref|ZP_02453944.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167909276|ref|ZP_02496367.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|226200340|ref|ZP_03795884.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237810613|ref|YP_002895064.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|242315778|ref|ZP_04814794.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254182011|ref|ZP_04888608.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|81380564|sp|Q63Y06|SYR_BURPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232767|sp|A3NQU2|SYR_BURP0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232768|sp|A3N542|SYR_BURP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52208437|emb|CAH34371.1| putative arginyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126218265|gb|ABN81771.1| arginine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126226228|gb|ABN89768.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134248971|gb|EBA49053.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|184212549|gb|EDU09592.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|225927662|gb|EEH23705.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237503627|gb|ACQ95945.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|242139017|gb|EES25419.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 594

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 203/611 (33%), Positives = 319/611 (52%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    G +V
Sbjct: 73  IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIAAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|111018491|ref|YP_701463.1| arginyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123145255|sp|Q0SGN1|SYR_RHOSR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110818021|gb|ABG93305.1| arginine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 550

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 191/587 (32%), Positives = 304/587 (51%), Gaps = 46/587 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L + + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAAKVLDERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +DS  IAG GF+N+ L+      I++ I+  G  +G      G ++
Sbjct: 64  LAGWLAEALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILDEGAAFGSGHTLDGKRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  +   ++L  P  +   + +   V  M  
Sbjct: 184 AAKG------EPAPEDGYAGAYIADIAAQVQSQ-RPDVLELPAGEQQEVFRAIGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +++               
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L RDG+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480
           + M+       +D D         ENPV+YVQYA+AR  +I R A D+     D DF L 
Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVADPDFSLL 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              V  QE +       LI  L EYPRV+ +A   +EP+++A YL +LA  +H  +   R
Sbjct: 459 ---VSEQEGD-------LIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACR 508

Query: 541 ENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P     Q +     L + RL L  A   ++++GL ++GV +P +M
Sbjct: 509 ILP-----QGDEEVGPLHIARLALCDASRQVLSNGLALLGVSAPEQM 550


>gi|269219842|ref|ZP_06163696.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210747|gb|EEZ77087.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 558

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 195/574 (33%), Positives = 298/574 (51%), Gaps = 42/574 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           D  + +E + L  + +ERPR   HG  +TN AM L+R  G +P  + EL+ ARI     V
Sbjct: 20  DGTLTIEGE-LPVVKVERPRSREHGDWATNVAMQLARRAGRNPRELGELLAARIAAHDGV 78

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           +   +AG GF+N+ LS + + ++  ++V +G  YGR     G  VN+E+VSANPTGP+H+
Sbjct: 79  EEAEVAGPGFVNIRLSAASVGELARAVVEAGGSYGRTEGDAGKTVNLEYVSANPTGPLHI 138

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           G  R A VGD+LA ++ FSG +V +EYY ND G QI+  A S+  R +        D+PE
Sbjct: 139 GGARWAAVGDSLARILEFSGAKVVKEYYFNDHGNQIDRFAASLLARAR------GEDVPE 192

Query: 199 GYYPGVYLKHVGKE-LADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             Y G Y+  + +  +AD  +    +     +E+     +   V+ M   I+  L     
Sbjct: 193 DGYGGQYVTEIAERVVADSIADGEPDPRELSDEQAHEAFRSRGVELMFAEIKSSLHDFRS 252

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D+F  ED  H  +   +   I+ L  +G VYE      K      C  D         
Sbjct: 253 DFDVFFHEDSLH--ESGAVSKAIERLRERGVVYE------KEGALWLCTTD--------- 295

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
             GDD DR ++KSDG   YFA DLAY+  K  RG DN +Y++G+DH GY+ R+ A+A A 
Sbjct: 296 -FGDDKDRVIVKSDGEAAYFAGDLAYYLDKRARGADNCVYMLGADHHGYIGRMYAMARAY 354

Query: 375 SEKKA---QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            +       + +L+ +LV L R G+P++MSKRAG  +TL  +VD VG D+ R+ ++    
Sbjct: 355 GDTAGPGENMEILIGQLVNLVRSGVPVRMSKRAGTVVTLEDLVDAVGVDAARYSLVRASV 414

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              LD D   V  ++ +NPV+YVQYA+AR  S+   A       +    P          
Sbjct: 415 DTTLDLDLDLVASRTNDNPVYYVQYAHARTCSVASNAASHGVRREDGFAP-------GLL 467

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           D  + +L+  LA +P V   + I +EP+++A YL ++A+ +H  +   R  PR     A+
Sbjct: 468 DAVDSELLGTLARFPDVAAQSAILREPHRVARYLEEVAAAYHTWYGKARVTPRAEEEVAD 527

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L   RL +  A   ++ +GL ++GV +P  M
Sbjct: 528 ---LHRTRLWVNDAAGVVLANGLGLLGVSAPERM 558


>gi|119896671|ref|YP_931884.1| arginyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166232755|sp|A1K2E2|SYR_AZOSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119669084|emb|CAL92997.1| putative arginine-tRNA ligase [Azoarcus sp. BH72]
          Length = 587

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 307/593 (51%), Gaps = 73/593 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++ERP+  +HG  +TN A+ L++PL  +P  +A L++A +     V    +AG GFIN 
Sbjct: 29  ILLERPKQASHGDFATNVALQLAKPLKRNPRELAALLLAELPASNLVAKTEVAGAGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+ +    ++  ++  G ++GR    K  KV +EFVSANPTGP+HVGH R A  G +L+
Sbjct: 89  TLAAAAKTAVVGEVLAKGADFGRG-AKKNVKVQVEFVSANPTGPLHVGHGRGAAYGASLS 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+GY+VTREYY+NDAG Q++ LALS + RY  AL+  D   P   Y G Y+  + +
Sbjct: 148 DVLCFAGYDVTREYYVNDAGRQMDILALSTWLRYL-ALFGIDVPFPPNAYQGDYVIDMAR 206

Query: 212 ELADKYSSELLNFPEEKWL---------------------------------------PI 232
            L D +          + L                                       P 
Sbjct: 207 GLRDAHQGRYAGVTLAQVLEGTPGLPVAERKDDEAKQQRELHLDGLIANAKRLLGEDYPF 266

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V  +++   +   RDDL+   +  D + SE      D   +   +  L ++G++Y     
Sbjct: 267 VHGFALNEQLGDGRDDLQEFGVHFDKWFSEKSLF--DTGLVERAVAELEKRGHIY----- 319

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                      +      FRST  GD+ DR + + +G YTYFA+D+AY   KYERGFD +
Sbjct: 320 -----------VQDGAKWFRSTDFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGFDRI 368

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I + G+DH GY+ R++   AA+     ++ V L +   LYRDG    MS R+G+F+TLR 
Sbjct: 369 IDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRDGQKTSMSTRSGEFVTLRE 428

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +  EVG+D+ RF  + RK+ + LDFD    K QS ENPV+Y+QYA+AR  S+  Q    +
Sbjct: 429 LRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYIQYAHARVCSVLNQ----W 484

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                +L   ++   E+E    EL L   LA +P V++ A     P+++AFYL DLA+ F
Sbjct: 485 GGEPAELQAADLGKLENE---RELALCARLAGFPEVVQGAAADYAPHQIAFYLKDLAADF 541

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  ++  R       +  ++  + + RL L  AV S++  GL ++GV +P  M
Sbjct: 542 HSWYNAER-------MLVDDEAVKLARLALAAAVRSVLRGGLAVLGVSAPESM 587


>gi|254468228|ref|ZP_05081634.1| arginyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087038|gb|EDZ64321.1| arginyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 552

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 195/589 (33%), Positives = 318/589 (53%), Gaps = 51/589 (8%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +++ N L +   ++ +E   +D I IERP+   HG  S+N A+ L++ +  +P  +A+LI
Sbjct: 3   NQISNILSDALQQLNIEISEVD-IHIERPKTLEHGDYSSNIALQLAKGMKKNPREVAQLI 61

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           + ++  +     + +AG GFIN +LS      I+  I+    +YGRN  G   K+ +EFV
Sbjct: 62  IDQVGSEQLFSKLELAGPGFINFHLSDIGRSLIIKEIIQKDDQYGRNTSGAKQKLQVEFV 121

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+H+GH R A +GD+LA +M  +G+EVTRE+Y NDAG QIN LALSV  R  + 
Sbjct: 122 SANPTGPLHIGHGRGAAIGDSLARIMDANGWEVTREFYYNDAGQQINNLALSVQSRL-KG 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           +   D+D PE  Y G Y+  + +          D+ +       ++  L  +K +SV  +
Sbjct: 181 VTPEDADFPEDGYRGDYILEIAEAFKILSSITVDRETVTATGNVDD--LEAIKQFSVAFL 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DL A     D+F  E  F+  +   + +++  L   G+ Y+      K   T  
Sbjct: 239 RNEQNIDLAAFQTHFDVFTLESSFYENE--AVHEVVQLLTDNGFAYK------KEDAT-- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     R+T  GDD DR ++KSDG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 289 --------WLRTTDFGDDKDRVMVKSDGGYTYFVPDVAYHLNKWQRGFVRVINEQGADHH 340

Query: 362 GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A    + +K  Q     +L ++V + ++   +K+SKRAG ++TLR ++D+VG 
Sbjct: 341 STITRVRAGLQGLQKKIPQDWPEYVLHQMVTVTKNNQEVKISKRAGSYVTLRDLIDQVGC 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF ++ RK    L FD      Q+ ENPV+Y+QYA+AR  ++  Q++          
Sbjct: 401 DATRFFLIARKPDSQLVFDIDLATSQTNENPVYYIQYAHARICAVLNQSE---------- 450

Query: 480 FPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             ++ + Q +E   S   E QLI  L+E+P +I  A     P+ +A +L DLA  FH ++
Sbjct: 451 LGQDQLLQFNEVLLSTKHEHQLIKRLSEFPEIISLAAEESSPHYIATFLKDLAGDFHSYY 510

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        +F+  +++ +   RL L+ A  +++ +GL ++GV +PN+M
Sbjct: 511 NAN------KFL-IDDQNIKCARLALILATKNVLRNGLQLLGVSAPNKM 552


>gi|78222646|ref|YP_384393.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193901|gb|ABB31668.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 569

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/571 (35%), Positives = 302/571 (52%), Gaps = 55/571 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKGFI 89
           IVIE+P    HG  +   AM +++     P  IAE IV  I+      +  + IAG GFI
Sbjct: 37  IVIEKPAHAEHGDFACTVAMSMAKAERKAPRVIAETIVKHIENGESGIIGGIDIAGPGFI 96

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  +      + L+ +  +G  +GR+  G+  KV +EFVSANPTGP+H+GH R A +GDT
Sbjct: 97  NFRIKNEAWSRTLAVVEAAGASFGRSCAGEERKVQVEFVSANPTGPLHIGHGRGAAIGDT 156

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +  L++ SG++VTRE+Y NDAGAQI  LALSV  R    +   D   P   Y G Y+K V
Sbjct: 157 ICRLLSASGFDVTREFYYNDAGAQIANLALSVQSRC-LGIEPGDPRWPADGYQGDYIKDV 215

Query: 210 G-----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                 +E  D     +    +   L  ++ ++V  + +    DL A ++  D++  E  
Sbjct: 216 ARSYLNRETVDAGDQHVTAAGDPNDLDAIRRFAVAYLRREQDQDLLAFDVHFDVYSLESS 275

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +      + +++  L   G+ +E                    L  R+T  GDD DR +
Sbjct: 276 LY--TEGRVEEVVRRLIENGHTFE----------------QDGALWLRTTDFGDDKDRVM 317

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAVSEKKAQ 380
            KSDGSYTYF  D+AY   K+ERGF  +I   G+DH   + R    L+A+ A + ++  +
Sbjct: 318 RKSDGSYTYFVPDVAYHLAKWERGFTRVINEQGADHHSTITRVRAGLQALNAGIPQEWPE 377

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L ++V + R G  +K+SKRAG ++TLR ++DEVG D+ RF  L RK    L FD  
Sbjct: 378 Y--VLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFLMRKPDSQLVFDID 435

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTS 494
             K+QS ENPV+YVQYA+AR  SIF  A D       FPD   DL      P+       
Sbjct: 436 LAKQQSLENPVYYVQYAHARISSIFEAACDRGISVPSFPDAHVDLLE---TPE------- 485

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E++LI  +  +P VIE + ++ EP+++ +YL +LA  FH  ++  R       V    ++
Sbjct: 486 EIELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFHSFYNKNR-------VIGEGKE 538

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L+  RL L+  VA ++ +GL ++GV +P +M
Sbjct: 539 LSSARLFLLKGVAQVLKNGLALLGVSAPEKM 569


>gi|226226873|ref|YP_002760979.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090064|dbj|BAH38509.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 561

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 192/559 (34%), Positives = 303/559 (54%), Gaps = 41/559 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINL 91
           V+ERPRD + G  +TN AM L++PLG  P  +AE ++A +      + +  IAG GFIN 
Sbjct: 38  VLERPRDPSFGDWATNLAMTLAKPLGKKPRDLAEALIAALDTARVGISAAEIAGPGFINF 97

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +  + L  I+ +  ++GR+ IG+G +V +EFVSANPTGP+HVGH R A +GD ++
Sbjct: 98  RLDPGFQARGLLQILAAPEQWGRHNIGQGERVVVEFVSANPTGPLHVGHGRQAALGDAIS 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+ ++G+ V RE+Y NDAGAQI  LA S   R ++ +   + ++PEG Y G Y+    +
Sbjct: 158 TLLEWTGWNVDREFYYNDAGAQIANLAKSTQARVRE-IGGAELEIPEGGYHGEYI----R 212

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+A++Y ++     E K L  +++++V A+      DL+A  ++ D +  E   +     
Sbjct: 213 EIAERYVAQHAVDAEGKDLEAMREFAVAALRHEQDLDLQAFGVKFDTYYLESSLY--TDG 270

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--- 328
            +   ++ L + GY +E                D   L  R+T  GDD DR + KS+   
Sbjct: 271 RVDKTVEALKQSGYTFE----------------DNGALFLRTTAFGDDKDRVMKKSEAKG 314

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLC 386
           G YTYF  D+AY   K+ERG+   I V G+DH     R+ A   A  +   +   + +L 
Sbjct: 315 GDYTYFVPDVAYHVTKWERGYHRAINVQGADHHSTTTRVRAGLQALGIGIPQGYPDYVLH 374

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++V + + G  +K+SKRAG ++T+R ++DEVG D+VR+  L RK    L FD    + QS
Sbjct: 375 QMVTVMKGGEEVKISKRAGSYVTVRDLIDEVGRDAVRYFYLMRKGDSQLVFDVDLARSQS 434

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           +ENPV+YVQ A+AR   IFR  +     +  +     V+ +      +E +LI  L ++P
Sbjct: 435 EENPVYYVQMAHARMCGIFRVGEIDATGVTAEGVDLGVLSE-----PAEQELIKQLLDFP 489

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +++ A    EP+++A +L + A   H  W H         V      +T  RL L  A 
Sbjct: 490 AIVKGAADNLEPHRIAGWLLETARAAH-TWYH------KHHVLGEPEAITRARLVLARAT 542

Query: 567 ASIINSGLNIIGVESPNEM 585
              I +GL I+G+ +P  M
Sbjct: 543 QLGIAAGLRILGLTAPERM 561


>gi|120405304|ref|YP_955133.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|166232813|sp|A1TD77|SYR_MYCVP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119958122|gb|ABM15127.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 550

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 197/585 (33%), Positives = 294/585 (50%), Gaps = 42/585 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L  IV +ERPR+  HG  +TN A+ L + +G +P  
Sbjct: 4   ADLAELLKATAAAVLAEHGLDSAALPAIVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + +  +AG GF+NL +  S    I+  ++ +G  YG +    G +V
Sbjct: 64  LAGWLAAALVAKDGIAAADVAGPGFVNLRIEASAQNVIVGDVIAAGATYGASGELDGRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G EV REYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAEVVREYYFNDHGAQIDRFTNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K    L   P+ +     +   V  M  
Sbjct: 184 AAKG------EPAPEDGYAGTYIADIAAQVLAKEPGAL-ELPDAEMRETFRAVGVNLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIAKLRETGSIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG   Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGQPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +VD +G D+ R
Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVDAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD---FDLF 480
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D    DL 
Sbjct: 399 YALIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGVAADTAHLDLL 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +           E  LI ++ E+PRV++ A   +EP++++ YL DLA  +H  +   R
Sbjct: 459 THD----------KEGTLIRNIGEFPRVLKTAASLREPHRVSRYLEDLAGDYHRFYDSCR 508

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P+      +   L   RL L  A   +I +GL I+GV +P  M
Sbjct: 509 VLPQGDETPGD---LHAARLALCAATRQVIANGLGILGVSAPERM 550


>gi|291530393|emb|CBK95978.1| arginyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 584

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 192/598 (32%), Positives = 307/598 (51%), Gaps = 56/598 (9%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N L  +  + K+E   L    +ERP D +HG  S NAAM  ++ L  +P  I ++I    
Sbjct: 18  NALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIGQMIADAA 77

Query: 73  KIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
            +D  V + + +AG GF+N ++SP +  + +  ++ SG +YG+  +GKG +V +EFVSAN
Sbjct: 78  VLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVLVEFVSAN 137

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTGPMH+G+ R   +GD+L+S++ F+GYEV RE+Y+NDAG QI     S+  RY Q    
Sbjct: 138 PTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIRYMQIADG 197

Query: 192 NDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           N SD                      +PE  Y GV +             + +N  EE  
Sbjct: 198 NKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFVNADEESR 257

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              + +Y++   +  +  DL    I +D +  E   H+     ++ I+D L  +G  YE 
Sbjct: 258 KSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHKS--GAVKQIVDMLTEKGQTYE- 314

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348
                              + F+++  GDD DR L++++G  TYF  D+AY   K   RG
Sbjct: 315 ---------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHYNKLVTRG 359

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           FD  I ++G+DH GY+ R++A   A+    +++++++ ++V L R+G  +K+SKR+G  I
Sbjct: 360 FDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLSKRSGKAI 419

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TL  ++DEV  D+ RF    R  +  L+FD     E+S  NPVFYVQYA+AR  SI R+ 
Sbjct: 420 TLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARICSILRRM 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           ++            N+   E  F+  +EL LI H+A  P  I  A     P K+  YL D
Sbjct: 480 EEEGTGYS------NIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKITKYLCD 533

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA +FH  + + +       ++     +   RL L  A  ++  + L+++ V++P +M
Sbjct: 534 LAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDAPEKM 584


>gi|108804495|ref|YP_644432.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765738|gb|ABG04620.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 543

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 193/559 (34%), Positives = 300/559 (53%), Gaps = 40/559 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           LD + +ERP D  HG  +TN A+  +R    +P  +AE +  R++  P V  V +AG GF
Sbjct: 23  LDGVHVERPNDPRHGDFATNVALANARTFRRNPRQVAEELAGRLRA-PFVREVEVAGPGF 81

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN  L+P  + + + +IV  G  YGR +   G  +N+EFVSANPTGP+HV H R A  GD
Sbjct: 82  INFRLAPEAVWEEIGAIVREGTGYGR-VPPSGDPINVEFVSANPTGPLHVAHGRHAAYGD 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL--PEGYYPGVYL 206
            LA ++  +G  V+REYY ND G QI     SV  RY + LY     +  P+  Y G Y 
Sbjct: 141 ALARILEAAGRRVSREYYFNDGGNQIRLFGESVADRYAR-LYGRAWPVSDPDALYKGDYT 199

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           + + ++L++ + + LL    E+ L I+ D++ +  M+ I+  L+   +  D + +E   +
Sbjct: 200 EEIARDLSEAHGASLLEMEPEEALRIIGDFAARWCMEDIKRTLERARVGFDTYFNEKSLY 259

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +++ I+ L   G  YE                    L   S+  GDD DR L+K
Sbjct: 260 --ESGAVQETIERLREAGCAYE----------------KDGALWLASSRFGDDKDRVLVK 301

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           SDGSYTY A D+AY   K+ RGF   I ++G+DH+GY  RL A   A+   +  ++V L 
Sbjct: 302 SDGSYTYVAPDIAYHLDKWSRGFRRAINILGADHAGYGTRLRAGLVALGLPEDFLDVELV 361

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            LV+L R+G  +K SKRAG+ +T   ++DEVG D  R+  +   +   ++FD      QS
Sbjct: 362 RLVKLLREGRQVKFSKRAGNIVTFDELLDEVGVDVARYFYVRSSHRNEMNFDLDLAIRQS 421

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           +ENPV+YVQYA+AR  SIFR+A +   +   ++ P  + P+E         L + L ++P
Sbjct: 422 EENPVYYVQYAHARICSIFRRAGE---EAGEEVPPGELAPEER-------LLALELIDFP 471

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           RV+  A   +E + +  +L  +A+ FH  ++  R       V   + ++   RL L  A 
Sbjct: 472 RVVRGAADRREVHPVPAHLETVATRFHQFYTVHR-------VLVEDGEVRARRLALCAAT 524

Query: 567 ASIINSGLNIIGVESPNEM 585
            +I+ +GL ++GV +P  M
Sbjct: 525 RNILAAGLGLLGVRAPERM 543


>gi|109894994|sp|Q39VQ6|SYR_GEOMG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 299/569 (52%), Gaps = 51/569 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKGFI 89
           IVIE+P    HG  +   AM +++     P  IAE IV  I+      +  + IAG GFI
Sbjct: 30  IVIEKPAHAEHGDFACTVAMSMAKAERKAPRVIAETIVKHIENGESGIIGGIDIAGPGFI 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  +      + L+ +  +G  +GR+  G+  KV +EFVSANPTGP+H+GH R A +GDT
Sbjct: 90  NFRIKNEAWSRTLAVVEAAGASFGRSCAGEERKVQVEFVSANPTGPLHIGHGRGAAIGDT 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +  L++ SG++VTRE+Y NDAGAQI  LALSV  R    +   D   P   Y G Y+K V
Sbjct: 150 ICRLLSASGFDVTREFYYNDAGAQIANLALSVQSRC-LGIEPGDPRWPADGYQGDYIKDV 208

Query: 210 G-----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                 +E  D     +    +   L  ++ ++V  + +    DL A ++  D++  E  
Sbjct: 209 ARSYLNRETVDAGDQHVTAAGDPNDLDAIRRFAVAYLRREQDQDLLAFDVHFDVYSLESS 268

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +      + +++  L   G+ +E                    L  R+T  GDD DR +
Sbjct: 269 LY--TEGRVEEVVRRLIENGHTFE----------------QDGALWLRTTDFGDDKDRVM 310

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--IN 382
            KSDGSYTYF  D+AY   K+ERGF  +I   G+DH   + R+ A   A++    Q    
Sbjct: 311 RKSDGSYTYFVPDVAYHLAKWERGFTRVINEQGADHHSTITRVRAGLQALNAGIPQEWPE 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G  +K+SKRAG ++TLR ++DEVG D+ RF  L RK    L FD    
Sbjct: 371 YVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFLMRKPDSQLVFDIDLA 430

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSEL 496
           K+QS ENPV+YVQYA+AR  SIF  A D       FPD   DL      P+       E+
Sbjct: 431 KQQSLENPVYYVQYAHARISSIFEAACDRGISVPSFPDAHVDLLE---TPE-------EI 480

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +LI  +  +P VIE + ++ EP+++ +YL +LA  FH  ++  R       V    ++L+
Sbjct: 481 ELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFHSFYNKNR-------VIGEGKELS 533

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+  VA ++ +GL ++GV +P +M
Sbjct: 534 SARLFLLKGVAQVLKNGLALLGVSAPEKM 562


>gi|313902824|ref|ZP_07836221.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466944|gb|EFR62461.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 566

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 194/557 (34%), Positives = 296/557 (53%), Gaps = 37/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E PRD  HG  ++NAA++L+      P  +A ++   +     +  V  AG GF+N 
Sbjct: 44  VQVEVPRDPRHGDFASNAALVLAGRARRAPREVAAVLERHLPGGAWLRKVEAAGPGFLNF 103

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+  + R+ + +I+ +G  +GR   G G +V +EFVSANPTGP+ V + R A +GD LA
Sbjct: 104 HLADDWWREGVRAILRAGEAFGRTDRGGGLRVQVEFVSANPTGPLGVVNARAAALGDALA 163

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++  +GY V +E+Y+NDAG QI  LALS+  R +Q L    +++PEG YPG YL  + +
Sbjct: 164 RVLQAAGYRVEKEFYLNDAGNQIRKLALSLEARMRQEL-GQPAEIPEGGYPGEYLIDIAR 222

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L       LL+ PEE+    +  ++V+A++  +R  L    ++ D +  E    R    
Sbjct: 223 DLLAAEGPALLDRPEEERWERMARFAVEAIVAQMRTQLARFGVEFDEWYPETRV-REAGY 281

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           P R +++ L ++G VYE                    L  RS+ VGDD DR L++ DG Y
Sbjct: 282 PER-VLERLRQRGMVYE----------------QDGALWLRSSAVGDDKDRVLVRRDGEY 324

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY   D+AY   K+ERGF   I + G DH G+V  ++A   A+        VLL ++V L
Sbjct: 325 TYTLVDIAYHLTKWERGFQRAIDIWGQDHHGHVVPMQAALRALGLPDGWFEVLLTQMVHL 384

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            R G  ++MSKR G+ +T+   +DEV  D+ R+  L R     LDFD      +S ENPV
Sbjct: 385 VRGGQAVRMSKRRGELVTMAEFLDEVDVDAARYFFLMRSPDTHLDFDLDLANLRSSENPV 444

Query: 452 FYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +YVQYA+AR   I RQA+    + PD   DL P          D +E  L   L + P  
Sbjct: 445 YYVQYAHARACGILRQAEAEAGLRPDGSADLSPLG--------DPAERDLARRLLDLPGE 496

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A  A+EP++L +YL D+A++FH  ++  R       V      +   RL LV A   
Sbjct: 497 VAAAAEAREPHRLTYYLKDVATLFHQFYTRCR-------VLGEEDPVARARLVLVDATRQ 549

Query: 569 IINSGLNIIGVESPNEM 585
           ++ + L ++GV +P  M
Sbjct: 550 VLATALGLLGVTAPERM 566


>gi|289671095|ref|ZP_06492170.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 566

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/565 (34%), Positives = 306/565 (54%), Gaps = 42/565 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLT----IAELIVARIKIDPDVDSVFIAGKGF 88
           V+ERP+   HG  +TNAAM+L++    +P +    +A+ ++A +    DV  V IAG GF
Sbjct: 32  VVERPKTREHGDFATNAAMLLAKAARSNPRSNPRVLAQALLAALPASDDVAKVDIAGPGF 91

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN +L+P+  ++ ++ ++  G +YGR L G G  V +E+VSANPTGP+HVGH R A +GD
Sbjct: 92  INFHLAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGD 151

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +LA ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L  + +  PE  Y G Y+  
Sbjct: 152 SLARVLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIAD 210

Query: 209 VGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V       +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E 
Sbjct: 211 VANAYLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLES 270

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             ++     + + +  L   G+ YE                +   L  +ST  GDD DR 
Sbjct: 271 SLYK--DGKVEEAVQQLIASGHTYE----------------EGGALWLKSTDFGDDKDRV 312

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381
           + KSDG+YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +   +   
Sbjct: 313 MRKSDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWP 372

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
             +L ++V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD   
Sbjct: 373 EYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDL 432

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIV 500
            + QS +NPVFYVQYA+AR  S+ RQA++     D      + + + +  D    L +++
Sbjct: 433 ARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYKYD----QTHGLAELAHLDDEHSLAVML 488

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L+ YP V+E A  A EPY++A YL +LA  FH  W H   N ++    A  R     +L
Sbjct: 489 ELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT-WYH---NSKVLVDDAAERD---AKL 541

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A   ++ +GL ++GV +P +M
Sbjct: 542 TLAVATQQVLANGLELLGVSAPEKM 566


>gi|71909477|ref|YP_287064.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|109894985|sp|Q478Y7|SYR_DECAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71849098|gb|AAZ48594.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 587

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 203/600 (33%), Positives = 308/600 (51%), Gaps = 87/600 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ERPRD  HG  +TN AM L++ L  +P  IA  ++A +     V    +AG GFIN 
Sbjct: 29  IHLERPRDPTHGDFATNLAMQLAKALKKNPREIANQLLAELPPSRLVTKAEVAGAGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +   ++ +++  G  +GR+  G   KV +EFVSANPTGP+HVGH R A  G +L+
Sbjct: 89  TLDAGFKTDVVKAVLAEGDNFGRSNQGGWQKVQVEFVSANPTGPLHVGHGRGAAYGASLS 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHV 209
           SL+ F+G++VTREYY+NDAG Q++ L LS + RY   L  +  D+P     Y G Y++ +
Sbjct: 149 SLLTFAGWDVTREYYVNDAGRQMDILGLSTWLRY---LEQHGVDVPFLPNAYQGDYVRDM 205

Query: 210 GKEL----ADKY---SSELL----NFPEEK----------------------------WL 230
            K++     DK+   ++++L      PE +                            W 
Sbjct: 206 AKQMTVAHGDKFVRPAADVLAGTPGLPEAERADDEAKRQRDLHLDALIANAKVLLGPDW- 264

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V  +++   +   RDDL+   +  D++ SE      D   +   +D L + G++Y   
Sbjct: 265 TYVHQHALSEQLADGRDDLEEFGVHFDVWFSEQALF--DTGLVARCVDLLEKNGHLY--- 319

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                        +      F+ST  GD+ DR + + +G YTYFA+D+AY   K+ERGFD
Sbjct: 320 -------------VQNGARWFKSTTFGDEKDRVVQRENGLYTYFASDIAYHLNKFERGFD 366

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I + G+DH GY+ R+     A+    +++ V L +   LYR+G    MS R+G+F+TL
Sbjct: 367 KVINIWGADHHGYIARVNGAITALGLDASKLQVALVQFAVLYRNGQKASMSTRSGEFVTL 426

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAK 469
           R +  EVG+D+ RF    RK+ + LDFD    K Q+ ENPV+Y+QYA+AR C  I +   
Sbjct: 427 RELRGEVGNDACRFFYALRKSDQHLDFDLDLAKSQTNENPVYYIQYAHARVCSVINQWGG 486

Query: 470 DIFPDLDFDLF----PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           D+    D +L     PR            EL +   LAE+  VI+ A     P+ +AFYL
Sbjct: 487 DLATLADANLALLDNPR------------ELAIASKLAEFRDVIDGAARELAPHLIAFYL 534

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLA  FHG ++  R       +  ++  L   R+ L  AV   I +G+ I+GV  P+ M
Sbjct: 535 KDLAGEFHGWYNAER-------MLVDDAALRDARVALAAAVRQTIRNGMTILGVSCPDSM 587


>gi|167749948|ref|ZP_02422075.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702]
 gi|167657115|gb|EDS01245.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702]
          Length = 584

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 192/600 (32%), Positives = 308/600 (51%), Gaps = 56/600 (9%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           + N L  +  + K+E   L    +ERP D +HG  S NAAM  ++ L  +P  I ++I  
Sbjct: 16  IMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIGQMIAD 75

Query: 71  RIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
              +D  V + + +AG GF+N ++SP +  + +  ++ SG +YG+  +GKG +V +EFVS
Sbjct: 76  AAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVLVEFVS 135

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGPMH+G+ R   +GD+L+S++ F+GYEV RE+Y+NDAG QI     S+  RY Q  
Sbjct: 136 ANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIRYMQIA 195

Query: 190 YNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             N SD                      +PE  Y GV +             + +N  EE
Sbjct: 196 DGNKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFVNADEE 255

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                + +Y++   +  +  DL    I +D +  E   H+     ++ I+D L  +G  Y
Sbjct: 256 SRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHKS--GAVKQIVDMLTDKGQTY 313

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           E                    + F+++  GDD DR L++++G  TYF  D+AY   K   
Sbjct: 314 E----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHYNKLVT 357

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RGFD  I ++G+DH GY+ R++A   A+    +++++++ ++V L R+G  +K+SKR+G 
Sbjct: 358 RGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLSKRSGK 417

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            ITL  ++DEV  D+ RF    R  +  L+FD     E+S  NPVFYVQYA+AR  SI R
Sbjct: 418 AITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARICSILR 477

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           + ++            N+   E  F+  +EL LI H+A  P  I  A     P K+  YL
Sbjct: 478 RMEEEGTGY------SNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKITKYL 531

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLA +FH  + + +       ++     +   RL L  A  ++  + L+++ V++P +M
Sbjct: 532 CDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDAPEKM 584


>gi|41408568|ref|NP_961404.1| arginyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81413777|sp|Q73X40|SYR_MYCPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|41396926|gb|AAS04787.1| ArgS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 550

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 197/591 (33%), Positives = 301/591 (50%), Gaps = 54/591 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+N    +  +  ++   L   +V+ERPR+  HG  ++N A+ L + +G +P  
Sbjct: 4   ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + S  +AG GFINL L  S    ++++++ +G  YG +       +
Sbjct: 64  LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  + + + L+ PE +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVL-RQAPDALSLPEPQLRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE      K   T    
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVDQAIARLRETGNIYE------KDGAT---- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 285 ------WLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA  +  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +IP     DT+ L+L+ H         L E+PRV++ A   +EP+++  YL DLA  +H 
Sbjct: 448 LIP-----DTAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHR 502

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P+          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 503 FYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550


>gi|15836752|ref|NP_297440.1| arginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9104936|gb|AAF82960.1|AE003868_6 arginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 586

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TN AM+LS+  G +P  +A+ +VA +    D+  + IAG GFIN +
Sbjct: 56  VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 115

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P   ++   +++    +YGRNL G+   V +E+VSANPTGP+HVGH R A +GD LA 
Sbjct: 116 LHPVAYQRETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 175

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           L+  +G+ V RE+Y NDAG QI  L  SV  R  + L   D+  P   Y G Y+  + K 
Sbjct: 176 LLEANGWNVKREFYYNDAGVQIENLVRSVQAR-ARGLKPGDAFWPTDAYNGEYIADIAKA 234

Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                   + D   +   N  +      +  ++V  +      DL A N+  DI+  E  
Sbjct: 235 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 291

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            ++     + + +  L   G+ YE                +   L  +ST  GDD DR +
Sbjct: 292 LYKD--GKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 333

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382
            KSDGSYTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +        
Sbjct: 334 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 393

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G  +K+SKR+G ++TLR +++E  +D+ R+ ++ RK    L FD    
Sbjct: 394 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 453

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +++S +NPVFYVQYAYAR  S+  QA +   +L++D     +   +   D + L L++ +
Sbjct: 454 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 510

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           + YP +++ A    EP+ +A YL +LA  FH  W H         V   N      +L L
Sbjct: 511 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 563

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +GLN++GV +P +M
Sbjct: 564 ACATRQVLANGLNLLGVGTPEKM 586


>gi|28198052|ref|NP_778366.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|71899271|ref|ZP_00681433.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
 gi|182680680|ref|YP_001828840.1| arginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130169|sp|Q87F22|SYR_XYLFT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238691058|sp|B2I6M4|SYR_XYLF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28056112|gb|AAO28015.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|71731004|gb|EAO33073.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
 gi|182630790|gb|ACB91566.1| arginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579142|gb|ADN63111.1| arginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 562

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TN AM+LS+  G +P  +A+ +VA +    D+  + IAG GFIN +
Sbjct: 32  VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P   ++   +++    +YGRNL G+   V +E+VSANPTGP+HVGH R A +GD LA 
Sbjct: 92  LHPVAYQRETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           L+  +G+ V RE+Y NDAG QI  L  SV  R  + L   D+  P   Y G Y+  + K 
Sbjct: 152 LLEANGWNVKREFYYNDAGVQIENLVRSVQAR-ARGLKPGDALWPTDAYNGEYIADIAKA 210

Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                   + D   +   N  +      +  ++V  +      DL A N+  DI+  E  
Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            ++     + + +  L   G+ YE                +   L  +ST  GDD DR +
Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382
            KSDGSYTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +        
Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G  +K+SKR+G ++TLR +++E  +D+ R+ ++ RK    L FD    
Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +++S +NPVFYVQYAYAR  S+  QA +   +L++D     +   +   D + L L++ +
Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           + YP +++ A    EP+ +A YL +LA  FH  W H         V   N      +L L
Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +GLN++GV +P +M
Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562


>gi|311693359|gb|ADP96232.1| arginyl-tRNA synthetase [marine bacterium HP15]
          Length = 561

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 194/563 (34%), Positives = 298/563 (52%), Gaps = 44/563 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +   +D +HG  + N A++ S+  G  P  +AE +V  +     V+ V IAG GFIN ++
Sbjct: 32  VGNTKDKSHGDYACNIALVASKAAGCAPRKLAEALVENLPESSAVEKVEIAGPGFINFFM 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S +   +++++I+  G  +GRN  G+G KV +EFVSANPTGP+HVGH R A +GD L  L
Sbjct: 92  STASAFEVVNTILDEGDRFGRNNQGQGEKVQVEFVSANPTGPLHVGHGRGAAIGDCLCRL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212
           +  +GY+VTRE+Y NDAGAQI+ LALSV  R  + L  +D   P   Y G Y+  V K  
Sbjct: 152 LEANGYDVTREFYYNDAGAQIDNLALSVQSRV-KGLTPDDESWPADGYRGDYIVDVAKAY 210

Query: 213 ------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                  AD         PE++    +++++V  + +    DLKA  +Q D++  E   +
Sbjct: 211 LAGDTVTADDREVTAKADPEDR--DAIREFAVAYLRREQDLDLKAFGVQFDVYFLESSLY 268

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   +  L   GY YE                    +  ++T  GDD DR + K
Sbjct: 269 --EDGKVEATVKRLQENGYTYE----------------QDGAMWLKTTEFGDDKDRVMRK 310

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INVL 384
            DG YTYF  D+AY   K++RGF  +I   G+DH   V R+ A   A++    Q   + +
Sbjct: 311 KDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQALNAGIPQGWPDYV 370

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + R G  +K+SKRAG ++T+R ++DEVG D+ RF +  R+    L FD    + 
Sbjct: 371 LHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGRDATRFFLAARRVDSQLTFDIDLARS 430

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHL 502
           Q+ ENPV+YVQYA+AR  S+ R+  +   +       RN    +    T   E  L   L
Sbjct: 431 QTNENPVYYVQYAHARICSVLRKLAEEGVER-----SRNECIGDLSLLTLDEEKDLANQL 485

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A+YP +I N+   +EP+ L  YL DLA  FH +++  +       V   +  +   R+ L
Sbjct: 486 AKYPELIANSAAQREPHHLTHYLRDLAGQFHTYYNAHK-------VLIEDTAVRDARVSL 538

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A+  +I +GL+++GV +P EM
Sbjct: 539 YLAIRQVIANGLDLLGVSAPEEM 561


>gi|312194803|ref|YP_004014864.1| arginyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226139|gb|ADP78994.1| arginyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 558

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 196/591 (33%), Positives = 310/591 (52%), Gaps = 46/591 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  + + ++       ++  +   + +ERP++  HG  ++ AA+ L++     P  +
Sbjct: 4   ADLADVIVSAVRAAVTDGAIDVAVPATVPVERPKNPEHGDYASPAALQLAKAARRAPREV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AEL+  R++ DP + +V +AG GF+N+ L+   L ++  +IV +G  YGR    KG +VN
Sbjct: 64  AELLADRLRKDPGIATVDVAGPGFLNIKLASDALGELARAIVRAGEAYGRAPQRKGVRVN 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+ +   R A VGD L  +   +GY+   EYY+NDAG QI     SV   
Sbjct: 124 VEFVSANPTGPVTLASTRWAAVGDALVRIFDAAGYDTASEYYVNDAGVQIARFGASVLAA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y+  +   L   +  +LL   + + L +     +  M+  
Sbjct: 184 AKG------EPTPEDGYHGAYVAEIAARLLADH-PDLLAGDDAQALAVAARDGLALMLTE 236

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IR  L+   +  D++ SE   H  +   +   + +L   G+VY               D 
Sbjct: 237 IRSTLEGFGVHFDVWKSELSMH--EAGELEAAVADLRTHGHVY---------------DA 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           D   +  R+T  GDD DRPL+KSDG  TYF AD AY++ K  RGFD ++ ++G+DH GY+
Sbjct: 280 D-GAVFLRTTDFGDDKDRPLIKSDGQPTYFCADAAYYRNKRGRGFDRLVLLLGADHHGYI 338

Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+A+AA   +   + ++V++ +LV L R G P+KMSKRAG+F+TL  +VD VG D+ R
Sbjct: 339 GRLQALAACFGDNPDESLDVIIGQLVTLSRGGEPVKMSKRAGNFLTLADLVDVVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI------FPDLDF 477
           + ++       LD D   + +Q+ +NPVFYVQYA+AR  S+ R A  +       P    
Sbjct: 399 YSLVRSSLDSSLDLDLDLIAKQTNDNPVFYVQYAHARIASLLRNAAALGITPADGPGAVL 458

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D    +++    E D     L+  L E P V+ +A   + P+++A YL +LA  +H    
Sbjct: 459 DGIDVSLLEHPREGD-----LLRALGELPTVVASAASLRAPHRVARYLEELAGTYH---- 509

Query: 538 HGRENPRLRFVQANNRK---LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R N   R +   + +   LT  RL LV A   ++ +GL ++GV +P  M
Sbjct: 510 --RFNDACRVLPRGDEEPTPLTAARLLLVEATKVVLANGLRLLGVSAPERM 558


>gi|23822211|sp|Q9PGZ9|SYR_XYLFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TN AM+LS+  G +P  +A+ +VA +    D+  + IAG GFIN +
Sbjct: 32  VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P   ++   +++    +YGRNL G+   V +E+VSANPTGP+HVGH R A +GD LA 
Sbjct: 92  LHPVAYQRETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           L+  +G+ V RE+Y NDAG QI  L  SV  R  + L   D+  P   Y G Y+  + K 
Sbjct: 152 LLEANGWNVKREFYYNDAGVQIENLVRSVQAR-ARGLKPGDAFWPTDAYNGEYIADIAKA 210

Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                   + D   +   N  +      +  ++V  +      DL A N+  DI+  E  
Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            ++     + + +  L   G+ YE                +   L  +ST  GDD DR +
Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382
            KSDGSYTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +        
Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G  +K+SKR+G ++TLR +++E  +D+ R+ ++ RK    L FD    
Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +++S +NPVFYVQYAYAR  S+  QA +   +L++D     +   +   D + L L++ +
Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           + YP +++ A    EP+ +A YL +LA  FH  W H         V   N      +L L
Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +GLN++GV +P +M
Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562


>gi|229490016|ref|ZP_04383869.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229323117|gb|EEN88885.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 550

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 186/582 (31%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +     ++  +L + + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I   +     ++S  IAG GF+N+ L       I+ S++ +G  YG      G K+
Sbjct: 64  LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGASYGSGDSLAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   +  K   ++++ P ++     +   V+ M  
Sbjct: 184 AAKG------EPAPEDGYAGAYIADIAASVL-KQRPDVMDLPADEQQETFRAIGVELMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +++L   G ++                
Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L +DG  +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           ++M+       +D D     + S ENPV+YVQYA+AR  +I R A D+    D       
Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + QE +       LI  + EYPRV+ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ +GL ++GV +P +M
Sbjct: 512 Q---GDEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550


>gi|292490188|ref|YP_003525627.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291578783|gb|ADE13240.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 585

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 196/586 (33%), Positives = 308/586 (52%), Gaps = 62/586 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++R RD  HG  ++N  M+L++     P  +A LIV+R+   P V+ V IAG GFIN 
Sbjct: 30  IQVKRTRDKRHGDFASNITMMLAKEARQKPRDLAGLIVSRLPEHPWVEKVEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+    + ++S ++    ++G + +G+   V++EFVSANPTGP+HVGH R A  GD LA
Sbjct: 90  TLALPAFQAVVSLVLDQREDFGCSNLGQNKPVHLEFVSANPTGPLHVGHGRGAAYGDALA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-- 209
            L+   GY++ REYY+NDAG Q++ LA SV+ RY + L       P   Y G Y++ +  
Sbjct: 150 RLLTTVGYKIHREYYVNDAGRQMDILAASVWLRYLE-LCGETLPFPANGYRGSYVRDIAQ 208

Query: 210 -------------GKELADKYSSELLNFPEEKWLPI----------------VKDYSVQA 240
                        G+E+ D    +     +E+++                  V D  + +
Sbjct: 209 VLKTEKDDIFHRPGQEILDGLPPDAPTGDKEQYIDALIQKCKDLLGERGYRQVFDQGLNS 268

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++  IR+DL    + +D + SE   H  +   +   ++ L    ++Y+            
Sbjct: 269 ILADIREDLAEFGVTYDEWFSER--HLMETGAVEQAVEQLKTSSHLYQ------------ 314

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                     FRST  GD+ DR +++ +G  TYFA+D+AY   K ERG+  +I V G+DH
Sbjct: 315 ----KEGAWWFRSTDFGDEKDRVVIRENGQPTYFASDIAYHLNKLERGYPKIIDVWGADH 370

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYV+R+++   A+     Q+ + L +   LYR    ++MS R+G+F+TLR +  EVG D
Sbjct: 371 HGYVQRVKSSLQALGADPQQLEIRLVQFAILYRGKEKVQMSTRSGEFVTLRELRQEVGKD 430

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + RF  + R   + +DFD    K QS ENPV+YVQYA+AR  S+FRQ ++    L +D  
Sbjct: 431 AARFFYVMRSAEQHMDFDLELAKSQSNENPVYYVQYAHARISSVFRQLEE--RGLAWD-- 486

Query: 481 PRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           P+    Q  + + S E+ L+  L+ Y  V+E+A     P+ LA+YL DLA  FH ++   
Sbjct: 487 PKQGRKQLQKLNESHEVALLDRLSCYSEVVEDAATQSAPHLLAYYLMDLARDFHTYY--- 543

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N     V  +  +L   RL L+ A   +I +GL ++GV +P  M
Sbjct: 544 --NAHTFLV--DTPELRDARLTLIAATQQVIKNGLTLLGVSAPEAM 585


>gi|291557256|emb|CBL34373.1| arginyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 584

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 191/598 (31%), Positives = 307/598 (51%), Gaps = 56/598 (9%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N L  +  + K+E   L    +ERP D +HG  S NAAM  ++ L  +P  I ++I    
Sbjct: 18  NALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIGQMIADAA 77

Query: 73  KIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
            +D  V + + +AG GF+N ++SP +  + +  ++ SG +YG+  +GKG +V +EFVSAN
Sbjct: 78  VLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVLVEFVSAN 137

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTGPMH+G+ R   +GD+L+S++ F+GYEV RE+Y+NDAG QI     S+  RY Q    
Sbjct: 138 PTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIRYMQIADG 197

Query: 192 NDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           N +D                      +PE  Y GV +             + +N  EE  
Sbjct: 198 NKADVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFVNADEESR 257

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              + +Y++   +  +  DL    I +D +  E   H+     ++ I+D L  +G  YE 
Sbjct: 258 KSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHKS--GAVKQIVDMLTEKGQTYE- 314

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348
                              + F+++  GDD DR L++++G  TYF  D+AY   K   RG
Sbjct: 315 ---------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHYNKLVTRG 359

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           FD  I ++G+DH GY+ R++A   A+    +++++++ ++V L R+G  +K+SKR+G  I
Sbjct: 360 FDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLSKRSGKAI 419

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TL  ++DEV  D+ RF    R  +  L+FD     E+S  NPVFYVQYA+AR  SI R+ 
Sbjct: 420 TLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARICSILRRM 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           ++            N+   E  F+  +EL LI H+A  P  I  A     P K+  YL D
Sbjct: 480 EEEGTGYS------NIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKITKYLCD 533

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA +FH  + + +       ++     +   RL L  A  ++  + L+++ V++P +M
Sbjct: 534 LAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDAPEKM 584


>gi|71275891|ref|ZP_00652174.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon]
 gi|71901382|ref|ZP_00683475.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
 gi|71163268|gb|EAO12987.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon]
 gi|71728841|gb|EAO30979.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
          Length = 562

 Score =  316 bits (810), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TN AM+LS+  G +P  +A+ +VA +    D+  + IAG GFIN +
Sbjct: 32  VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P   +    +++    +YGRNL G+   V +E+VSANPTGP+HVGH R A +GD LA 
Sbjct: 92  LHPVAYQHETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           L+  +G+ V RE+Y NDAG QI+ L  SV  R  + L   D+  P   Y G Y+  + K 
Sbjct: 152 LLEANGWNVKREFYYNDAGVQIDNLVRSVQAR-ARGLKPGDALWPTDAYNGEYIADIAKA 210

Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                   + D   +   N  +      +  ++V  +      DL A N+  DI+  E  
Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            ++     + + +  L   G+ YE                +   L  +ST  GDD DR +
Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382
            KSDGSYTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +        
Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G  +K+SKR+G ++TLR +++E  +D+ R+ ++ RK    L FD    
Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +++S +NPVFYVQYAYAR  S+  QA +   +L++D     +   +   D + L L++ +
Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           + YP +++ A    EP+ +A YL +LA  FH  W H         V   N      +L L
Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +GLN++GV +P +M
Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562


>gi|262201839|ref|YP_003273047.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085186|gb|ACY21154.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 550

 Score =  316 bits (810), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 191/564 (33%), Positives = 291/564 (51%), Gaps = 41/564 (7%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E  + D + +ERPR   HG  STN A+ L + LG+ P  +A  +         +    +A
Sbjct: 25  ETLVPDSVGVERPRHADHGDYSTNIALQLGKRLGVSPRELAGWLAEAYAGADGIAKAEVA 84

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+NL+L+ +    +++++V  G EYGR     G+ +N+EFVSANPTGP+H+G  R A
Sbjct: 85  GPGFVNLWLAAAAQNTVIATVVEQGAEYGRGDELGGSVINLEFVSANPTGPIHLGGTRWA 144

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VGD L  ++   G  VTREYY ND G QI+  A S+    Q          PE  Y G 
Sbjct: 145 AVGDALGRVLGARGAAVTREYYFNDHGTQIDRFARSLEAAAQGG------PTPEDGYAGA 198

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  +   +  +    +L  P+++ +   +   V+ M   I++ L       D+F  ED 
Sbjct: 199 YIGDIAAAVVQQVPG-VLEQPDDERVETFRSVGVELMFAHIKESLHEFGTDFDVFTHED- 256

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                         ++   G V E I    + K   K          RST  GDD DR +
Sbjct: 257 --------------SMFTSGLVDECI---AELKANDKLYEKDGAWWLRSTEFGDDKDRVV 299

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KSDG+  Y A D+AY + K  RGF   IY++G+DH GY+ RL+A AAA+ +    + VL
Sbjct: 300 IKSDGNAAYIAGDIAYIRDKRNRGFSLCIYMLGADHHGYISRLKAAAAALGDDPDVVEVL 359

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++V L RDG P++MSKRAG  ITL  +V+ VG D  R+ ++       +D D   + +
Sbjct: 360 IGQMVNLVRDGKPVRMSKRAGTVITLDDLVEAVGVDGARYSLIRSSVDVNIDIDLDLLTK 419

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIF--PDL-DFDLFPRNVIPQESEFDTSELQLIVH 501
           QS ENPV+YVQYA+AR  ++ R A D+   PDL + DL            D +E +LI  
Sbjct: 420 QSNENPVYYVQYAHARLSALSRNAADLGLQPDLANIDLL----------VDPAEGELIRT 469

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           + ++  V+  A   +EP+++  YL  LA  +H  ++  R  P+     A+   +   RL 
Sbjct: 470 IGDFDEVVATAASLREPHRVCRYLESLAGAYHRFYARCRVLPQGDEEPAD---IHRARLA 526

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +GL+++GV +P  M
Sbjct: 527 LCAATRQVLANGLDLVGVSAPERM 550


>gi|302529809|ref|ZP_07282151.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302438704|gb|EFL10520.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 554

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 192/563 (34%), Positives = 289/563 (51%), Gaps = 45/563 (7%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + + IERPR+  HG  +TN A+ +++  GL P   AE +   +     V +  +AG GF+
Sbjct: 30  ETVTIERPRNPDHGDYATNLALQVAKKAGLKPREFAEALAEVVAGADGVAAAEVAGPGFL 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L+     +++  ++ +G EYGR     G ++N+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NFRLAADAQGEVVRQVLAAGAEYGRGDALAGRRINLEFVSANPTGPIHLGGTRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++   G +VTREYY NDAGAQI+    S+    +          PE  Y G Y+  +
Sbjct: 150 LGRVLGAQGADVTREYYFNDAGAQIDRFVRSLIAAAK------GEPAPEDGYAGGYISDI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E+  K     L+ PE +     +   ++ M   I+  L       D++  E+  H  +
Sbjct: 204 AAEVL-KAEPSALSLPEVQRHETFRRIGIELMFSQIKQSLHEFGTDFDVYFHENSLH--E 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +  L   G +Y                        +S+  GDD DR +LK DG
Sbjct: 261 SGAVDAAVQQLKDSGNLY----------------FADGAWWLKSSEYGDDKDRVVLKKDG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y A DLAYFK K  RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V
Sbjct: 305 NPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMV 364

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L  DG P++MSKRAG  ITL  +V+ VG D  R+ ++       LD D   +++ S +N
Sbjct: 365 NLVSDGKPVRMSKRAGTVITLEDLVEAVGVDPARYELIRYSVDSSLDIDLDLLRKHSNDN 424

Query: 450 PVFYVQYAYARCRSIFRQAKDI-------FPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           PV+YVQYA+AR  S+ R A D+         D DF L     +P E +       LI  +
Sbjct: 425 PVYYVQYAHARLSSLRRGAADLGLKVDESGADADFGLL---TLPAEGD-------LIRTI 474

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            E+P V+  A   +EP+++A YL +LA  +H  ++ GR  P+          LT  RL L
Sbjct: 475 GEFPAVVRRAAEMREPHRVARYLEELAGAYHKFYTVGRVLPQ---GDEEATPLTYARLAL 531

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +GL+++GV +P  M
Sbjct: 532 CEAARQVLANGLSLLGVSAPERM 554


>gi|323356884|ref|YP_004223280.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273255|dbj|BAJ73400.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 554

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 188/553 (33%), Positives = 291/553 (52%), Gaps = 35/553 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP++  HG  ++NAAM L++ +G +P   A  I A ++    + SV +AG GFIN+ L
Sbjct: 36  LERPKNRDHGDWASNAAMKLAKVVGANPREFAAEIAAGLESVDGIASVEVAGPGFINIRL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +    +   IV  G  +G N       +N+EFVSANPTGP+H+G  R A +GD LA +
Sbjct: 96  DAAAAGALAKVIVEQGEAFGTNDSRADEVINLEFVSANPTGPIHLGGTRWAALGDALARI 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           ++  G +VTREYY ND GAQI+  A S+   +Q          PE  Y G Y+  + K +
Sbjct: 156 LSAQGAQVTREYYFNDHGAQIDRFARSLVAAHQG------DPTPEDGYGGAYIGDIAKRV 209

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A+ Y  ++     +      ++  V  M   I+  L    +  D++  E+D H  +   +
Sbjct: 210 AEAYDGDVDALDADAKQEAFRELGVNFMFDEIKQSLHEFGVDFDVYFHENDLH--NSGAV 267

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              +  L   G+++E                       RST  GDD DR ++KSDG   Y
Sbjct: 268 ERAVARLRELGHIFEA----------------DGATWLRSTEFGDDKDRVIIKSDGQPAY 311

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLY 392
            + DLAY+  K ERGF+  I ++G+DH GYV+RL A+ AA   E    + VL+ ++V L 
Sbjct: 312 ISGDLAYYLDKRERGFNRCIIMLGADHHGYVQRLMAMCAAFGDEPNVNLQVLIGQMVNLV 371

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RDG P++MSKRAG  +TL  +V+ VG D+ R+ +        LD D   +++++ +NPVF
Sbjct: 372 RDGQPMRMSKRAGTVVTLEDLVEIVGVDAARYALTRSSADSNLDIDLDVLQKRTNDNPVF 431

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  ++ R A      +D   F   ++  ESE       L+  L EYPR++ +A
Sbjct: 432 YVQYAHARTHNVARNAA--ASGVDRSEFAPELLDHESES-----ALLGALQEYPRIVAHA 484

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              +EP+++A YL +LA ++H  + + R  P      A    +   RL L  A   ++ +
Sbjct: 485 ADVREPHRVARYLEELAGLYHRWYDNCRVIP---LSDAPVETVHRTRLWLNDATGQVLRN 541

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P  M
Sbjct: 542 GLTLLGVSAPERM 554


>gi|291541511|emb|CBL14621.1| arginyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 578

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 192/562 (34%), Positives = 302/562 (53%), Gaps = 27/562 (4%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90
            +IE P D +HG  +TNAAM  ++   + P  IA+ I + + ++  + D    AG GFIN
Sbjct: 36  FIIETPADRSHGDFATNAAMAGAKAFRMPPFKIAQAITSNLDLEGTMFDRFETAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L   +   ++  I+ +   YGR+  G+  KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFLGTEFYSAVIREILANPEAYGRSEYGRDEKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY   RE+Y+NDAG QI     S+  RY Q    ++ + PE  Y G  +K + 
Sbjct: 156 AAVLDKAGYNAWREFYVNDAGNQIEKFGCSLEARYLQIFKGDEIEFPEDGYQGEDIKDLA 215

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE AD     L+N   E+    + DY++   +K ++ D++   I +D +  E + H+   
Sbjct: 216 KEYADLNGDSLVNVSAEERKKALVDYALPKNIKKMQADMEKYKIFYDKWFFESELHKS-- 273

Query: 271 SPIRDIIDNLARQGYVYE---GILPPPKSKTTQKCDMDRK-QLLFRSTMVGDDVDRPLLK 326
             ++ ++D L  +G  YE    +    K   TQK   + K Q    +  + DDV   L++
Sbjct: 274 GAVKAVVDLLTEKGLTYEKEGAVWYKNKEVLTQKLLKEGKSQKYIDNLELKDDV---LIR 330

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            +G+ TYF AD+AY K K++RGF  +I V G+DH G+V R++    A+     ++NV+L 
Sbjct: 331 QNGNPTYFTADIAYHKNKFDRGFTTLIDVWGADHHGHVMRMKGAMDAIGYDGDKLNVVLM 390

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +LV+L +DG  ++MSKR G  I L  ++DEV  DS RF+   ++ +  +DFD      Q 
Sbjct: 391 QLVKLVKDGELVRMSKRTGKAIQLGDLLDEVPVDSARFLFNTKEANTQMDFDLDLAVSQD 450

Query: 447 KENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHLA 503
            +NPV+YVQYA+AR  SIF+  AK+        + PR     E    T+  E +LI HLA
Sbjct: 451 NQNPVYYVQYAHARICSIFKSLAKE-------GISPRECTDAELALLTAPEEKELINHLA 503

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            Y   I +A    +P K+  Y+  LA++FH  ++  R       V+     L   RL L 
Sbjct: 504 SYTNEIISAAKDYDPTKVTRYVTQLATLFHKFYNACR-------VKGEEEGLMQARLALC 556

Query: 564 HAVASIINSGLNIIGVESPNEM 585
           + V ++I + L +  +  P  M
Sbjct: 557 NCVRAVIKNVLTMFNISCPESM 578


>gi|269957251|ref|YP_003327040.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305932|gb|ACZ31482.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 566

 Score =  316 bits (809), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 191/572 (33%), Positives = 295/572 (51%), Gaps = 61/572 (10%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR   HG  +TN A+ L++  G +P  +AE++ +R+     +  V IAG GF+N+ L
Sbjct: 36  VERPRQREHGDWATNVALQLAKKAGTNPRALAEVLASRLASVSGIKQVDIAGPGFLNITL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  SIV +G  YG N    G  +N+EFVSANPTGP+H+G  R A VGD+LA +
Sbjct: 96  DAAAAGELARSIVETGATYGHNQAEAGKHINLEFVSANPTGPLHIGGVRWAAVGDSLARV 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  SG +VTREYY ND GAQI+  A S+      A    ++  PE  Y G Y+    +E+
Sbjct: 156 LEASGAQVTREYYFNDHGAQIDRFARSLL-----AAARGEA-APEDGYGGSYI----REI 205

Query: 214 ADKYSSELL--------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           AD  +++ L          P+ +     +   VQ M   ++  L    +  D+F  ED  
Sbjct: 206 ADAVTAQALAAGEPAPATLPDGEAQEAFRARGVQMMFAEVKTSLHDFGVDFDVFFHEDSL 265

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  +   +   +  L   G+++E                       R+T  GDD DR ++
Sbjct: 266 H--ESGAVERAVARLRELGHIFEA----------------DGATWLRTTDFGDDKDRVVI 307

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVL 384
           K DG   Y A D+AY+  K ERG D  IY++G+DH GYV R+ A+ AA  +     + +L
Sbjct: 308 KRDGEAAYIAGDIAYYLDKRERGADEAIYMLGADHHGYVGRMMAICAAFGDTPGVTMQIL 367

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + +LV L +DG P++MSKRAG+ IT+  +VD VG D+ R+ +        +D D   +  
Sbjct: 368 IGQLVNLVKDGEPVRMSKRAGNIITIDDLVDAVGVDAARYSLARFAADSTIDLDLDLLTS 427

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQL 498
           Q  ENPV+YVQYA++R  ++ R A +              + +   F+ S      E  L
Sbjct: 428 QKNENPVYYVQYAHSRTAAVDRNAAE------------RGVARADGFEPSLLDHPTEAVL 475

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLT 556
           +  LAE+PRV+  A   +EP+++A YL  LA  +H  W   +  +  + R +   +  +T
Sbjct: 476 LGRLAEFPRVVGEAAALREPHRVARYLEALAGDYH-SWYQAKDADGAQRRVLPYPDEPVT 534

Query: 557 ---MMRLQLVHAVASIINSGLNIIGVESPNEM 585
                RL L  AV  ++ +GL ++GV +P  M
Sbjct: 535 DTHRTRLWLNDAVRQVLANGLGLLGVSAPERM 566


>gi|226307411|ref|YP_002767371.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511654|sp|C1A1Z7|SYR_RHOE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226186528|dbj|BAH34632.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 550

 Score =  316 bits (809), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 186/582 (31%), Positives = 299/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +     ++  +L + + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I   +     ++S  IAG GF+N+ L       I+ S++ +G  YG      G K+
Sbjct: 64  LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGSSYGSGDSLAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   +  K   +++  P ++     +   V+ M  
Sbjct: 184 AAKG------EPAPEDGYAGAYIADIAASVL-KQRPDVMELPADEQQETFRAIGVELMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +++L   G ++                
Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L +DG  +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           ++M+       +D D     + S ENPV+YVQYA+AR  +I R A D+    D       
Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + QE +       LI  + EYPRV+ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ +GL ++GV +P +M
Sbjct: 512 Q---GDEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550


>gi|53724623|ref|YP_101930.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76812104|ref|YP_332006.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121601263|ref|YP_994392.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385045|ref|YP_001027962.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126448815|ref|YP_001081819.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167001851|ref|ZP_02267643.1| arginine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167917308|ref|ZP_02504399.1| arginyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217419591|ref|ZP_03451097.1| arginine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238562825|ref|ZP_00439796.2| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254176934|ref|ZP_04883591.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202041|ref|ZP_04908405.1| arginyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254259734|ref|ZP_04950788.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254359822|ref|ZP_04976093.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81605730|sp|Q62MY7|SYR_BURMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109894976|sp|Q3JWP7|SYR_BURP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232764|sp|A3MNI3|SYR_BURM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232765|sp|A2S7P3|SYR_BURM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232766|sp|A1V839|SYR_BURMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52428046|gb|AAU48639.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76581557|gb|ABA51032.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121230073|gb|ABM52591.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293065|gb|ABN02334.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126241685|gb|ABO04778.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147747935|gb|EDK55011.1| arginyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|148029036|gb|EDK86968.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160697975|gb|EDP87945.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217396895|gb|EEC36911.1| arginine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238521851|gb|EEP85299.1| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062445|gb|EES44631.1| arginine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254218423|gb|EET07807.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 594

 Score =  315 bits (808), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 202/611 (33%), Positives = 318/611 (52%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +      +V
Sbjct: 73  IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHDKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIAAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|170729360|ref|YP_001774793.1| arginyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687898|sp|B0U1H9|SYR_XYLFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167964153|gb|ACA11163.1| Arginine--tRNA ligase [Xylella fastidiosa M12]
          Length = 562

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 187/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+ERP+   HG  +TN AM+LS+  G +P  +A+ +VA +    D+  + IAG GFIN +
Sbjct: 32  VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P   +    +++    +YGRNL G+   V +E+VSANPTGP+HVGH R A +GD LA 
Sbjct: 92  MHPVAYQHETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           L+  +G+ V RE+Y NDAG QI+ L  SV  R  + L   D+  P   Y G Y+  + K 
Sbjct: 152 LLEANGWNVKREFYYNDAGVQIDNLVRSVQAR-ARGLKPGDALWPTDAYNGEYIADIAKA 210

Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                   + D   +   N  +      +  ++V  +      DL A N+  DI+  E  
Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            ++     + + +  L   G+ YE                +   L  +ST  GDD DR +
Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382
            KSDGSYTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A  +        
Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + R G  +K+SKR+G ++TLR +++E  +D+ R+ ++ RK    L FD    
Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +++S +NPVFYVQYAYAR  S+  QA +   +L++D     +   +   D + L L++ +
Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           + YP +++ A    EP+ +A YL +LA  FH  W H         V   N      +L L
Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +GLN++GV +P +M
Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562


>gi|38233629|ref|NP_939396.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401545|sp|Q6NHU6|SYR_CORDI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|38199889|emb|CAE49555.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 550

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/583 (31%), Positives = 310/583 (53%), Gaps = 38/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  +K    ++    +++  +L + +V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   ADLSQLIKQTAIDVLSARELDTTVLPETVVVERPRNPEHGDYATNVALQIAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + +++   +  +  +D   IAG GFIN+ L+ +   +I++ I+ +G  +G + + +G +V
Sbjct: 64  LGQVLADSLAANTAIDEASIAGPGFINIRLAAAAQGEIVAKILEAGATFGHSDLYQGRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGRQIDRFTNSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K +   +  ++  ++L   E       +   V+ M  
Sbjct: 184 SAK------GEPTPEDGYGGDYIKEIADAVVAQHP-DVLALAEADLNERFRATGVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  E+     +   +   I  L   G +Y                
Sbjct: 237 HIKESLHEFGTDFDVYFHENSLF--ESGAVDKAIQTLKDNGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +S+  GDD DR ++KSDG   Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 279 FNEGAWWLKSSEYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+  + + + VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D  R
Sbjct: 339 ISRLRAAAAAMGYEPSNVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGIDGAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482
           + M+       LD D    ++QS +NPV+YVQY +AR  SI R+A D+    +D DL   
Sbjct: 399 YSMIRSSVDSSLDIDLQLWEQQSSDNPVYYVQYGHARLCSIARKAADLGITAIDPDL--- 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++  + E D     LI  L E+P V++ A   +EP+++A +  DLA  FH  +   +  
Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAAELREPHRIARFAEDLAGTFHRFYDSCQIL 510

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+   V  +   +   RL L +A   ++ + L ++GV +P  M
Sbjct: 511 PK---VGESAEPIHTARLALANATRQVLANALRLVGVSAPERM 550


>gi|254774331|ref|ZP_05215847.1| arginyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 550

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/591 (33%), Positives = 301/591 (50%), Gaps = 54/591 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+N    +  +  ++   L   +V+ERPR+  HG  ++N A+ L + +G +P  
Sbjct: 4   ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + S  +AG GFINL L  S    ++++++ +G  YG +       +
Sbjct: 64  LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  + + + L+ PE +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVL-RQAPDALSLPEPQLRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE      K   T    
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVDQAIARLRETGNIYE------KDGAT---- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 285 ------WLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA  +  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAAFGDDPAAVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D +       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIELALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +IP     DT+ L+L+ H         L E+PRV++ A   +EP+++  YL DLA  +H 
Sbjct: 448 LIP-----DTAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHR 502

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P+          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 503 FYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550


>gi|329894770|ref|ZP_08270571.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922759|gb|EGG30092.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 558

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 195/574 (33%), Positives = 303/574 (52%), Gaps = 49/574 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           ++K  +  I IER RD +HG  ++N A+ +++  GL+P  +AE I+A +  D  +D   I
Sbjct: 22  LQKDSVGAIQIERTRDPSHGDFASNIALAMAKKAGLNPRQLAEKIIAALPADKALDRCEI 81

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFIN +LS S    +++SI+  G  +G N +G   +V IEFVSANPTGP+HVGH R 
Sbjct: 82  AGPGFINFFLSKSASTSVIASILEQGAAFGTNALGNNQRVQIEFVSANPTGPLHVGHGRG 141

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A VGDTL+ L+   GY V RE+Y NDAGAQI+ LA SV  R  + L  +  + P+  Y G
Sbjct: 142 AAVGDTLSRLLQACGYRVDREFYYNDAGAQIDHLARSVQARC-EGLDPSSPEWPQDGYRG 200

Query: 204 VYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            Y+  + K   DK        E+    +   +  +++++V  + +    DLKA  ++ D 
Sbjct: 201 EYIVDLAKAFQDKAVIQAEDREVAASGDIGDIDAIREFAVAYLRREQDLDLKAFGVEFDY 260

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      + D ++ L   G+ YE                D   L   +   GD
Sbjct: 261 YFLESSLYA--SGAVDDTVERLRDNGFTYE----------------DDGALWLNTEAFGD 302

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAV 374
           D +R + K +G YTYF  D+AY   K+ RG+D +I   G+DH   V R    L+A+ A +
Sbjct: 303 DKNRVMRKREGGYTYFVPDVAYHLNKWNRGYDVVINEQGADHHSTVTRVRAGLQALKAGI 362

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            E   +   +L ++V + R+G  +K+SKRAG ++TLR +VDEVG D+ R+ ++ R  S  
Sbjct: 363 PEGWPEY--VLHQMVLVMRNGEEVKLSKRAGSYVTLRDLVDEVGRDATRYFLVARAPSSQ 420

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L FD      QS ENPV+Y+QYA+AR  S+  +  +          P   +   +    S
Sbjct: 421 LTFDIDLALSQSNENPVYYIQYAHARICSMLNKLANT---------PSASVSDAALAALS 471

Query: 495 ELQ---LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           E Q   LI  L ++P V++ A   + P+ +A +L DLA+ FH  ++  +       V  +
Sbjct: 472 EPQEEALIKELDKFPEVVKQAGQQRAPHMIANFLKDLAAAFHTFYNAHK-------VLVD 524

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      R+ L  A   ++ +GL+I+GV +P  M
Sbjct: 525 DATTQEARVALCLATQHVLQNGLDILGVSAPESM 558


>gi|118619176|ref|YP_907508.1| arginyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166232812|sp|A0PUL8|SYR_MYCUA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118571286|gb|ABL06037.1| arginyl-tRNA synthetase ArgS [Mycobacterium ulcerans Agy99]
          Length = 550

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 198/591 (33%), Positives = 301/591 (50%), Gaps = 54/591 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + +V+ERPR+  HG  ++N A+ L++ +G +P  
Sbjct: 4   ADLAELLKTTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  IV  +     + S  +AG GFINL L  S   KI+++I+ +G  +G + +    KV
Sbjct: 64  LAGWIVEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+  +   +  K + + L+ P+ +     ++  V  M  
Sbjct: 184 AAKG------EPTPDDGYAGSYINDIAARVLQK-APDALSLPDAQMHETFREIGVDLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   +  L   G +YE      K   T    
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE------KDGAT---- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSD    Y A DLAY+  K ERGFD  IY++G+DH GY
Sbjct: 285 ------WLRSSSFGDDKDRVVIKSDDKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  E    + VL+ ++V L RDG P++MSKR G  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGEDPGTVEVLIGQMVNLVRDGQPVRMSKRTGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++            
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +IP     DT  L+L+ H         L ++PR+++ A   +EP+++  YL DLA  +H 
Sbjct: 448 LIP-----DTDHLELLSHEKEGVLLRTLGDFPRMLKAAASLREPHRVCRYLEDLAGDYHR 502

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P+         +L   RL L  A    I +GL I+GV +P  M
Sbjct: 503 FYDSCRVLPQ---GDEEPTQLHTARLALCQATRQAIANGLGILGVTAPERM 550


>gi|305682134|ref|ZP_07404938.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658607|gb|EFM48110.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 550

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 185/556 (33%), Positives = 290/556 (52%), Gaps = 35/556 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++V+ERPR+  HG  +TN A+ +++ +G++P  +A L+V  +    ++ +V IAG GFI
Sbjct: 30  EQVVVERPRNPEHGDYATNLALQIAKKVGMNPRELAGLLVDALSAHDEIATVDIAGPGFI 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L+ +   +I++ I+ +G  YG N +  G ++N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 90  NIRLAAAAQGQIVADILAAGTTYGHNSLYSGERINLEFVSANPTGPVHLGSTRWAAVGDS 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++A  G +VTREYY ND G QI+    S+    +         +PE  Y G Y+  +
Sbjct: 150 LGRILAACGADVTREYYFNDHGRQIDRFTNSLIAAAK------GQPVPEDGYGGDYISEI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              +  +    +L   E       +   V+ M   I+  L    +  D++  E+     +
Sbjct: 204 AANIVAQEPG-VLQQSEPDMRETFRALGVELMFDHIKATLHEFGVDFDVYFHENSLF--E 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +D L   G +Y                        RST  GDD DR ++KSDG
Sbjct: 261 SGAVDRAVDKLKENGNLY----------------FSNGAWWLRSTNYGDDKDRVVIKSDG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              Y A D+AY   K+ERG    IY++G+DH GY+ RL A AAA+      + VL+ +LV
Sbjct: 305 DAAYIAGDIAYVANKFERGHTRSIYMLGADHHGYISRLRAAAAAMGYNPNNVEVLIGQLV 364

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG  ++MSKRAG  ITL  +V+ +G D+ R+ ++       LD D      QS EN
Sbjct: 365 NLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAARYSLVRSSVDSTLDIDLTLWANQSNEN 424

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+ ++A  +   +D    P   +  E      E  LI  L EYP V+
Sbjct: 425 PVYYVQYAHARLCSLAKKAAAVGVTVD---NPDLSLLTEDH----EGTLIRTLGEYPTVV 477

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A   +EP+++A Y+ +LA  FH  +   +  P+        + +   RL L  A   +
Sbjct: 478 KAAAELREPHRIARYIEELAGTFHRFYDTCQILPK---AGEQAQPIHTARLALATATRQV 534

Query: 570 INSGLNIIGVESPNEM 585
           I + L ++GV +P +M
Sbjct: 535 IANALGLLGVTAPEQM 550


>gi|312621722|ref|YP_004023335.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202189|gb|ADQ45516.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 561

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 201/558 (36%), Positives = 314/558 (56%), Gaps = 36/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN AM L+R L  +P  IA  IV+ I +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIANGIVSAIDLSNTFIEKVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G +YG+  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFRKDWLYKVVDVILTEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   + DLPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  D++  +L N   ++    + D++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + I++L  +GY YE  G L    SK  +                    D  L++++
Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDESLK-----------------DEVLIRAN 315

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +
Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPEKLIVILMQ 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ 
Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR   I R   +    LD     ++ I  E      EL+L+  L E P 
Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSRIKVELLQQEEELELLRKLLELPE 490

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            IE A    +  ++  YL DLAS+FH  ++  R       V+  N +L   RL LV  V 
Sbjct: 491 EIEIAARNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543

Query: 568 SIINSGLNIIGVESPNEM 585
            +IN+ L ++GVE+P +M
Sbjct: 544 IVINNMLRLLGVEAPEKM 561


>gi|119474652|ref|ZP_01615005.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450855|gb|EAW32088.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 580

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 203/570 (35%), Positives = 306/570 (53%), Gaps = 33/570 (5%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R RD +HG L++N AM L++     P  IA+LI+  +     V    IAG GFIN
Sbjct: 29  RISVDRTRDKSHGDLASNIAMTLAKAAKKPPKDIAQLIINALPASTQVSKAEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+ +    ++  I+  G  YGR   GKG KV +EFVSANPTGP+HVGH R A VGD++
Sbjct: 89  FYLNEAAAAAVVIDILSQGKNYGRCNDGKGKKVQVEFVSANPTGPLHVGHGRGAAVGDSI 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV- 209
             L+  +G++VT E+Y NDAG QI+ LA SV  R  + L   D   PE  Y G Y+  V 
Sbjct: 149 CRLLDAAGWDVTAEFYYNDAGQQISNLAGSVQARC-KGLGPGDESWPEDGYQGSYINDVA 207

Query: 210 ----GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                KE  D     ++   +   L  + D++V  + +    DLKA  +  D++  E   
Sbjct: 208 NSYMAKEKIDAEDKHVVGAGDADNLEAISDFAVAYLRREQDLDLKAFGVDFDVYYLESSL 267

Query: 266 HRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDR 322
           +  +   + D +  L   G+ Y  EG L     KTT   D D+ +++ +S +V  D V  
Sbjct: 268 Y--NEGKVADTVQQLINSGHTYEKEGAL---WLKTTDFGD-DKDRVMRKSGVVETDPVSG 321

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
              + +G YTYF  D+AY   K++RGF+ ++   G+DH   + R+ A   AVS+    +N
Sbjct: 322 NETRKEGGYTYFVPDVAYHLNKWQRGFERVVNEQGADHHSTITRVRAGIQAVSQHN-HLN 380

Query: 383 V-------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           +       +L ++V + R G  +K+SKRAG +IT+R +VDEVG D+ R+ +  R  +  L
Sbjct: 381 IPQQWPEYVLHQMVMVMRGGEEVKISKRAGSYITIRDLVDEVGKDATRYFLAARAANSQL 440

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD      QS +NPV+Y+QYA+AR  S+ R+  D        L   N    E   + +E
Sbjct: 441 TFDIDLAISQSNDNPVYYIQYAHARVCSMMRKLSDHQWSWSAKL---NSNTLEHLVEDAE 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  L+ YP +I+NA I  EP+ +A YL +LA  +H ++     N     V  ++  L
Sbjct: 498 KALMKKLSGYPELIKNAAIHSEPHTVANYLRELAGDYHSYY-----NAHKTLV--DDDDL 550

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L  +V  +I +GL+++GV +P EM
Sbjct: 551 RNARLSLSESVRQVIENGLSLLGVSAPAEM 580


>gi|254207373|ref|ZP_04913724.1| arginyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|147752915|gb|EDK59981.1| arginyl-tRNA synthetase [Burkholderia mallei JHU]
          Length = 578

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 198/591 (33%), Positives = 309/591 (52%), Gaps = 62/591 (10%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFI 83
           +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE IVA +   P+    VD+  I
Sbjct: 17  VLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQIVAALTAQPEAAGLVDAAEI 76

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL L+P+  + ++ +++  G  +G +      +V +EFVSANPTGP+HVGH R 
Sbjct: 77  AGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQ 136

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   R  + L   D+  PE  Y G
Sbjct: 137 AALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNG 195

Query: 204 VYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            Y+  +      G+ +A      +    + + L  ++ ++V  + +    DLKA  ++ D
Sbjct: 196 EYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFD 255

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      +   +D L   G  YE                    L  R+T  G
Sbjct: 256 QYYLESSLY--TEGRVEKTVDALIAAGMTYE----------------QEGALWLRTTDEG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VS 375
           DD DR + K+DG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      + 
Sbjct: 298 DDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIG 357

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-----------------DEV- 417
             K   + +L ++V + RDG  +K+SKRAG ++T+R ++                 DE  
Sbjct: 358 IPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEAT 417

Query: 418 ---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
              G D+VRF ++ RK      FD     +Q+ ENPV+YVQYA+AR  S+  + K  +  
Sbjct: 418 ITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGA 477

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D  L   ++ P +S+     + L+  LAEYP V+ +A     P+ +AFYL +LAS FH 
Sbjct: 478 TDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHS 534

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V  + +     R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 535 FYNAER-------VLVDEQAPRTARVALLAATRQVLENGLAMLGVSAPSKM 578


>gi|289548074|ref|YP_003473062.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181691|gb|ADC88935.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 551

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 189/565 (33%), Positives = 300/565 (53%), Gaps = 36/565 (6%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           K  ++   +E PR    G L+TN A ILS+ L  +P  IA+ + A +      D+   A 
Sbjct: 18  KTEVEEFQVEPPRQEELGDLATNVAFILSKTLRRNPQEIAQYL-ANLLSQHGFDAT--AQ 74

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           +GFIN+ +  S ++++   I+  G  +    +G+G ++ +E VSANPTGP+H+GH R AV
Sbjct: 75  RGFINIRILESTVKEMTKQILQEGESFFLEKVGEGKRILVELVSANPTGPLHLGHGRIAV 134

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL----PEGYY 201
           VGD +A L+   G++VTREYYINDAG Q+  L LS+ +R  +    +  D+     E  Y
Sbjct: 135 VGDVIARLLTAFGFDVTREYYINDAGRQVYLLGLSILYRCLEMTGRDPEDIRPTFEEEGY 194

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            G Y+  + KE    Y  EL     E+ +  +    ++ +++ I   L  L++  D + S
Sbjct: 195 KGTYVMDLAKEALQTYGEELFKGDREETIRTLSQLGIRKILEEISQTLSKLDVSIDSWFS 254

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E      +   + +++  L  +GY+YE                    + F+ST+ GDD D
Sbjct: 255 ERSLV--EEGRVEEVLSVLQEKGYLYE----------------KDGAIWFKSTLFGDDKD 296

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           R L KS G YTYFA D+AY   KY+RG+  ++ V G+DH GY+ RL     A+      +
Sbjct: 297 RVLRKSTGEYTYFATDIAYHYEKYKRGYQQVVNVWGADHHGYLPRLVGALRALGIPDQWL 356

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            V   ++VRL++    ++MSKRAG+F+TL  +++EVG D+VRF+ L R++   LDFD   
Sbjct: 357 RVEWVQMVRLFKGEEEVRMSKRAGEFVTLEELMEEVGKDAVRFIFLTRRSDTPLDFDIQL 416

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-DLDFDLFPRNVIPQESEFDTSELQLIV 500
             E+S ENPVFYVQYA+AR R +FR+ K  +  D D      ++     E      +  +
Sbjct: 417 ALEKSSENPVFYVQYAHARIRGVFREVKTRYGIDPDNAGLGEHIQNLRDEAGVKLCKKCI 476

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L +    + +A     P+ +  +L + A  FH +++H R       V   +R+L + RL
Sbjct: 477 FLKD---TLWDAVSKLAPHIITSWLIETAKDFHNYYNHHR-------VMVEDRELMLSRL 526

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            ++  V   + + LN+IGV +P  M
Sbjct: 527 AVLKTVEISLKTALNLIGVSAPERM 551


>gi|119505532|ref|ZP_01627604.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458641|gb|EAW39744.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 564

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 189/567 (33%), Positives = 303/567 (53%), Gaps = 51/567 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           ++  +D +HG L+TN AM+LS+  G  P  +A  I+  +  +  +    IAG GFIN +L
Sbjct: 34  VDHTKDASHGDLATNLAMVLSKKAGKAPRDLAAAIIEALPTNDLISKTEIAGPGFINFFL 93

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + +   +++ SI+ SG ++G +  G G +  +EFVSANPTGP+HVGH R A +GD+L+ L
Sbjct: 94  NQASNVEVIRSILNSGPKFGTSDKGAGRRAQVEFVSANPTGPLHVGHGRGAAIGDSLSRL 153

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G+ V RE+Y NDAG QI  LA SV  R  Q L   D D PE  Y G Y+     +L
Sbjct: 154 LEATGWSVHREFYYNDAGQQIANLARSVQAR-AQGLTPEDPDWPEDGYRGTYI----VDL 208

Query: 214 ADKYSSELLNFPEEKW---------LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           A  Y +++     ++          L  ++D++V  + +    DLKA  +Q D +  E  
Sbjct: 209 ATAYQNKITVSAADRTITALGDVDNLAAIRDFAVAWLRREQDLDLKAFGVQFDEYFLESA 268

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +  +   + D +  L R G+ YE                +   L  R++  GDD DR +
Sbjct: 269 LY--ESGEVTDTVTALERAGHTYE----------------EGGALWLRTSDFGDDKDRVM 310

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQIN 382
            K  G YTYF  D+AY   K++RGF+ +I   G+DH   + R+ A    +++   +    
Sbjct: 311 RKKGGEYTYFVPDVAYHFNKWQRGFERVINEQGADHHSTITRVRAGLQGLAKDIPEGWPE 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +L ++V + RDG  +K+SKRAG ++TLR +++ VG D+ RF +  R  S  L FD    
Sbjct: 371 YVLHQMVTVMRDGTEVKLSKRAGSYVTLRDLIEWVGKDATRFFLAARSASSQLTFDIDLA 430

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             QS ENPVFY+QYA+AR  S+ R+A     D  P    D         ++   + EL L
Sbjct: 431 LAQSNENPVFYIQYAHARVCSVKRKALSEGSDWTPQAGLDHL-------DTLTSSEELAL 483

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + LA++P ++ +A    EP+ +A YL ++A+ FHG ++        + +  +N+  ++ 
Sbjct: 484 ALLLAKFPEIVASAAQRLEPHDIANYLREVAAAFHGLYN------AHKLIDEDNKNQSLG 537

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R+ L  A   +I +GL+++GV +P  M
Sbjct: 538 RISLAEATRQVIANGLDLLGVSAPESM 564


>gi|189485731|ref|YP_001956672.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287690|dbj|BAG14211.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 552

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 205/591 (34%), Positives = 309/591 (52%), Gaps = 58/591 (9%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-E 66
           ++K+ LK I  K    K I  R+   +E P        + NAAM++++ + ++P T+A E
Sbjct: 5   KIKDSLKVIIAKYLQGKGITGRLNFTLEIPPRNIDADFAFNAAMLIAKKVKINPRTVAQE 64

Query: 67  LIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           LI   +K  P+ ++   IAG GFINL +    L K L +I+    +YG        K+ +
Sbjct: 65  LIDITVKEIPELIEKAEIAGAGFINLRIKNEILYKELETILREKDKYGSFPENNKEKILV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GD++  ++   GY+V +EYY+ND G Q+  L+ SV  R+
Sbjct: 125 EFVSANPTGPLHIGHGRGAAIGDSIVRILKHLGYDVIKEYYLNDYGNQMLVLSKSVEIRF 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +Q L     D P  +Y G Y+  + K L ++    + +NF  E         SV+ ++  
Sbjct: 185 RQ-LKGEKIDFPADHYQGSYIIDIAKRLISENRDIDEVNFKYE---------SVKEILSW 234

Query: 245 IRDDLKALNIQHDIFISED----DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           I+DDLK   ++ D + SE     D  +   + +    + L  +G  Y             
Sbjct: 235 IKDDLKDFAVEFDDWFSETKITADKDKNGKTEVDKTCEYLLAKGNAY------------- 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
              +    L   ST  GDD DR L +SDG YTY A+D A+ K K+ERGF  +  + G+DH
Sbjct: 282 ---VKGDALWLASTKFGDDKDRVLKRSDGRYTYLASDAAHHKNKFERGFTKLANLWGADH 338

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYV R++A    +   K  ++++L + V L R+G+ + MS R G+FITL+ V DEVG D
Sbjct: 339 HGYVARIKACVQMLGFDKEALDIILYQFVSLVRNGLSVTMSTRTGEFITLKEVADEVGKD 398

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI------FPD 474
           + RF  L R     ++FD    K+QS +NPVFYVQY  ARC SI R++K+         +
Sbjct: 399 ACRFFFLMRAPDSQIEFDLELAKKQSSKNPVFYVQYVNARCSSIIRESKNRSGITSEIKN 458

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++F L               E  LI  LA +   +  +     P+    YL +LA +FH 
Sbjct: 459 INFSLLNTK----------EERDLIKQLAAFCDTLALSEKTMSPHHFTVYLIELADIFHK 508

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +    EN R+    AN   LT  RL+L+  VA II +GLN++GV  P++M
Sbjct: 509 FY----ENYRVLTGDAN---LTSARLKLIEGVAIIIKNGLNLLGVSVPDKM 552


>gi|126666725|ref|ZP_01737702.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628770|gb|EAZ99390.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 578

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 193/565 (34%), Positives = 300/565 (53%), Gaps = 48/565 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I   +D +HG  + N A++ ++  G  P  +AE +VA +     VD V IAG GFIN ++
Sbjct: 49  IGNTKDKSHGDYACNIALVAAKFAGCAPRKLAEALVANLPASAAVDKVEIAGPGFINFFM 108

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S +    ++++ +    ++GRN  GKG KV +EFVSANPTGP+HVGH R A +GD +  L
Sbjct: 109 STASAFGVVNAALEQAEDFGRNHSGKGEKVQVEFVSANPTGPLHVGHGRGAAIGDCICRL 168

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV---- 209
           +  +GY+VTRE+Y NDAGAQIN L LSV  R  + L  +    PE  Y G Y+  V    
Sbjct: 169 LDANGYQVTREFYYNDAGAQINNLGLSVQARV-KGLTPDHQSWPENGYRGDYIADVAEAY 227

Query: 210 --GKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             GK + AD+ S  +    E   L  + +++V  + +    DLKA  ++ D++  E   +
Sbjct: 228 LAGKTITADERS--VTGQAEPDNLEAITNFAVAYLRREQDLDLKAFGVEFDVYFLESSLY 285

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   +  L   GY YE                D   L  ++T  GDD DR + K
Sbjct: 286 --NDGKVEATVKRLQENGYTYE----------------DGGALWLKTTEFGDDKDRVMRK 327

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384
           +DG YTYF  D+AY   K++RGF  +I   G+DH   V R+ A   A  +   +   + +
Sbjct: 328 TDGGYTYFLPDVAYHLDKWQRGFSTVINEQGADHHSTVTRVRAGLQALNIGIPEGWPDYV 387

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + R G  +K+SKRAG ++TL  +++EVG D+ RF +  R+    L FD    + 
Sbjct: 388 LHQMVMVTRGGEEVKLSKRAGSYVTLSDLIEEVGRDATRFFLAARRVDSQLTFDIDLARS 447

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR----NVIPQESEFDTSELQLIV 500
           Q+ ENPV+Y+QYA+AR  S+ R+       L  +   R    ++          E +L  
Sbjct: 448 QTNENPVYYIQYAHARICSVLRK-------LAVEGVQRGRHESLGDLTLLTLDEEKELAN 500

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            LA+YP ++ +A   +EP+ L+ YL +LA +FH +++  +       V   +  L   R+
Sbjct: 501 QLAKYPELVASAAAQREPHTLSQYLRELAGLFHSYYNAHK-------VLIEDTALRDARI 553

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  AV  +I +GL+++GV +P EM
Sbjct: 554 SLYLAVRQVIENGLDLLGVSAPEEM 578


>gi|152965218|ref|YP_001361002.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083537|sp|A6W7E9|SYR_KINRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151359735|gb|ABS02738.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 554

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 187/555 (33%), Positives = 296/555 (53%), Gaps = 35/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERP++  HG  +T+ A+ L++  GL P  +A L+  R+     V +V IAG GF+N+
Sbjct: 34  VRVERPKNRDHGDWATSVALQLAKKAGLPPREVAALVQRRLLEVEGVRAVDIAGPGFLNV 93

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L  +   ++  S+V +G  +GR+    G ++N+EFVSANPTGP+H+G  R A VGD+LA
Sbjct: 94  TLDAAAAGELARSVVEAGPAFGRSATPTGERINLEFVSANPTGPIHLGGTRWAAVGDSLA 153

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++  +G  VTREYY ND GAQI+  A S+  R       ND   PE  Y G Y+  +  
Sbjct: 154 RVLEAAGATVTREYYFNDHGAQIDRFARSLLAR------ANDEPAPEDGYGGDYVTDIAA 207

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  + +  LL+ P E+   + +   V+ M   IR  L    ++ D++  ED  H     
Sbjct: 208 AVLAE-APGLLDLPREEQQEVFRREGVELMFAEIRQSLAEFGVEFDVYFHEDSLHTS--G 264

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L   G +YE                       R++  GDD DR ++KSDG  
Sbjct: 265 AVGRAVQKLRDLGRIYEA----------------DGATWLRTSDFGDDKDRVVIKSDGHP 308

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVR 390
            Y + DLAY+  K ERGFD  + ++G+DH GYV R+ A+ AA  +     + +L+ ++V 
Sbjct: 309 AYISGDLAYYLDKRERGFDRCVLMLGADHHGYVPRMMAMCAAFGDTPGVNLEILIGQMVN 368

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG+P++MSKRAG  +T+  +V+ VG D+ R+ ++       +D D   +  +S +NP
Sbjct: 369 LLKDGVPVRMSKRAGTVVTMEDLVEAVGVDAARYSLVRSSVDSSIDIDLDLLTRRSNDNP 428

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           VFYVQYA+AR  ++   A       + D F  +++ +E+E       L+  LAE+P V+ 
Sbjct: 429 VFYVQYAHARTANVAVNAAAAGVRRE-DAFDPSLLTEETES-----LLLAALAEFPAVVA 482

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   +EP+++A YL +LA  FH  +   R  PR          +   RL L  A   ++
Sbjct: 483 RAGELREPHRVARYLEELAGRFHKFYDACRVTPR---AGEEVTDVHRTRLWLNDATRQVL 539

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV SP+ M
Sbjct: 540 ANGLGLLGVSSPDRM 554


>gi|262377144|ref|ZP_06070369.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307882|gb|EEY89020.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 596

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 188/597 (31%), Positives = 316/597 (52%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIASKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I      YGR  +    ++ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAVLDQIQAQQATYGRTQVNADKRIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L   +   P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQELVFPKNAYQGDYVKEIAQSI 210

Query: 214 AD---------------------KYSSEL--------LNFPEEKWLP------------- 231
            D                     ++++EL        L+  +EK +              
Sbjct: 211 IDQDGDAYVRPVADVYKDVPEDVQFAAELDADGNKVVLSGDKEKHIDGLIFNSQALIGTG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    +++A++  I+DDL    +  + + SE+         I + +  L ++G++YE 
Sbjct: 271 YRVFLQAALKAILDDIKDDLGEFGVTFNQWFSEESL----TDKIEEALQTLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                         +D   + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 --------------LD-GNIWFKSTAFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDIIDIWGSDHHGYIARVKAAIDALGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                +++FD      +  + E D +E +++  LA YP ++  A  + EP+++  YL +L
Sbjct: 491 S---TNVNFDATAARNLAAKLELD-AETEILAKLAAYPEILVRAANSYEPHQIGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V  ++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNDNK-------VLGDDAELTQARLLLSVNVRQVLRNGLELLGVSAPESM 596


>gi|56477479|ref|YP_159068.1| arginyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81357403|sp|Q5P3E7|SYR_AZOSE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56313522|emb|CAI08167.1| Arginyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 587

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 304/596 (51%), Gaps = 79/596 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ERP+   HG  +TN A+ L++PL   P  +AEL++A +     V +  +AG GFIN 
Sbjct: 29  IHLERPKQAGHGDFATNLALQLAKPLRRRPRELAELLLAELPRSTLVAATEVAGAGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+       + +++  G E+GR     GT V +EFVSANPTGP+HVGH R A  G +LA
Sbjct: 89  TLAAGAKTAAVGTVLERGAEFGRG-ARNGTSVQLEFVSANPTGPLHVGHGRGAAYGASLA 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F+G +VTREYYINDAG Q++ LALS + RY  ALY  D   P   Y G Y+  + +
Sbjct: 148 AVLDFAGSDVTREYYINDAGRQMDILALSTWLRYL-ALYGLDIPFPPNAYQGDYVVDMAR 206

Query: 212 ELADKYSSELLNFPEEK------WLPI--------------------------------- 232
            + + +      F  E+       LP+                                 
Sbjct: 207 AMREGHQDRFAGFTIEQVLEGAPGLPVAERKDDEAKTQREDHLDMLIANAKRLLGEDYHF 266

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V  +++   +   RDDL+   +  D + SE      D   +   +  L ++G+VY     
Sbjct: 267 VHGFALNEQLGDGRDDLEEFGVHFDKWFSEKSLF--DTGLVDRAVAELEKRGHVY----- 319

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                      +      FRST  GD+ DR + + +G YTYFA+D+AY   KYERG+D +
Sbjct: 320 -----------LQDGAKWFRSTAFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGYDRI 368

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I + G+DH GY+ R++   AA+     ++ V L +   LYR+G    MS R+G+F+TLR 
Sbjct: 369 IDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRNGQKASMSTRSGEFVTLRE 428

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +  EVG+D+ RF  + RK+ + LDFD    K QS ENPV+YVQYA+AR  S+  Q     
Sbjct: 429 LRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYVQYAHARVCSVLEQWGGEA 488

Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +L     DL            +  EL L   L  +P +I+NA     P+++AFYL DLA
Sbjct: 489 AELRAAQLDLLG----------NERELALCARLGGFPELIQNAAADHAPHQIAFYLKDLA 538

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  ++  R       +  ++  L + RL L  AV  ++ + L ++GV +P  M
Sbjct: 539 AEFHSWYNAER-------MLVDDPALRLARLALATAVRQVLATALALLGVSAPQSM 587


>gi|227832873|ref|YP_002834580.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182639|ref|ZP_06042060.1| arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254782956|sp|C3PFN8|SYR_CORA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|227453889|gb|ACP32642.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 553

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/582 (31%), Positives = 302/582 (51%), Gaps = 35/582 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D S  +KN    +  + +++  +L + + +ERPR+  HG  +TN A+ +++  G  P  +
Sbjct: 5   DLSVLIKNTAAAVLTEHELDASVLPETVTVERPRNPEHGDYATNLALQVAKKAGAQPREL 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+ +   +  +  +D   IAG GF+N+ L+ +    I++ ++ +G ++G N   +G K+N
Sbjct: 65  AQWLADALAGNDAIDEASIAGPGFLNIRLAAAAQGAIVAQVLNAGADFGSNTTYQGKKIN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  A S+   
Sbjct: 125 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFARSLVAA 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y+K + + + ++ +   L+  + +     +   V+ M   
Sbjct: 185 AK------GEPTPEDGYGGGYIKEIAQGVLEQ-NPGALDGSDAEVQEAFRSAGVEMMFAQ 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++ L    +  D++  E+     +   +   I  L   G +YE                
Sbjct: 238 IKESLHEFGVDFDVYFHENSLF--ESGAVEKSIQKLKDNGKLYEA--------------- 280

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                  +ST  GDD DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY+
Sbjct: 281 -EGAWWLKSTEYGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYI 339

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL A A A+      + VL+ ++V L RDG  +KMSKRAG  ITL  +V+ +G D  R+
Sbjct: 340 ARLRASAQALGYDPDAVEVLIGQMVNLVRDGKAVKMSKRAGTVITLDDLVEAIGVDGARY 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRN 483
            ++       LD D      QS +NPV+YVQY +AR  SI R+A ++ F        P +
Sbjct: 400 SLVRSSVDSSLDIDLGLWASQSADNPVYYVQYGHARICSILRKAAELGFDTAALADAPLD 459

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V+  A   +EP+++A Y  +LA+VFH  +   +  P
Sbjct: 460 LLTHDKEGD-----LIRTLGEFPEVVATAATLREPHRIARYAEELAAVFHRFYDQCQVLP 514

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +   RL L  A   ++++ L  +GV +P +M
Sbjct: 515 K---AGEETEPIHSARLALASATRQVMSNALTTVGVSAPEKM 553


>gi|169628524|ref|YP_001702173.1| arginyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688923|sp|B1MLU2|SYR_MYCA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169240491|emb|CAM61519.1| Arginyl-tRNA synthetase (ArgS) [Mycobacterium abscessus]
          Length = 550

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 296/555 (53%), Gaps = 37/555 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN A+ +++ +G+ P  +A  +V  +     +    IAG GF+NL
Sbjct: 32  VTVERPRNPEHGDYATNVALQVAKKVGVAPRDLAGWLVEALVSHAAIAGAEIAGPGFVNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++      I+++I+ +G  YG N   +GT  +N+EFVSANPTGP+H+G  R A VGD L
Sbjct: 92  RIAADAQGTIVANILKAGETYG-NSDAQGTHTINLEFVSANPTGPIHIGGTRWAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+A  G +VTREYY ND GAQI+    S+    +        + PE  Y G Y+  + 
Sbjct: 151 GRLLARQGAKVTREYYFNDHGAQIDRFVRSLIASAE------GKEAPEDGYAGDYIADIA 204

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K++  +   E L   E +   + ++  V  M   I++ L       D+F  ED  H    
Sbjct: 205 KQVITQ-RPEALTLTEPERSEVFREIGVDLMFTHIKESLHEFGTDFDVFTHEDSMHT--S 261

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +++ I  L + G +YE      K   +            RS+  GDD DR ++KSDG+
Sbjct: 262 GRVQEAIAQLRKTGNIYE------KDGAS----------WLRSSNFGDDKDRVVIKSDGN 305

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y A D+AY+  K ERGFD  IY++G+DH GY+ RL+AVAAA+      + VL+ ++V 
Sbjct: 306 PAYIAGDIAYYLDKRERGFDLCIYMLGADHHGYIARLKAVAAALGYDADSVEVLIGQMVN 365

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG P++MSKRAG  ITL  +VD +G D+ R+ ++       +D D       S ENP
Sbjct: 366 LVRDGQPVRMSKRAGTVITLDDLVDAIGVDAARYALIRSSVDTSIDIDLELWASASSENP 425

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  ++ R A D+   L        ++  E E       LI  L E+ R+++
Sbjct: 426 VYYVQYAHARLCALARNAADL--GLQHSTEHLELLTHEKEG-----ALIRGLGEFGRILQ 478

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           NA   +EP+++A YL D+A  +H  +   R  P+      +   L   RL L  A   +I
Sbjct: 479 NAAALREPHRVARYLEDIAGDYHRFYDSCRVLPQGDETPGD---LHAARLALCLATRQVI 535

Query: 571 NSGLNIIGVESPNEM 585
            +GL+I+GV +P  M
Sbjct: 536 ANGLDILGVSAPERM 550


>gi|222530004|ref|YP_002573886.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456851|gb|ACM61113.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 561

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 200/558 (35%), Positives = 313/558 (56%), Gaps = 36/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN AM L+R L  +P  IA  IV  I +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G +YG+  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFKKDWLYKVVDVILSEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   + DLPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENVDLPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  D++  +L N   ++    + D++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + I++L  +GY YE  G L    SK  +                    D  L++++
Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDESLK-----------------DEVLIRAN 315

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +
Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPEKLIVILMQ 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ 
Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR   I R   +    LD     ++ I  E      EL+L+  L E P 
Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSRIKVELLQQEEELELLKKLLELPE 490

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            IE A    +  ++  YL DLAS+FH  ++  R       V+  N +L   RL LV  V 
Sbjct: 491 EIEMAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543

Query: 568 SIINSGLNIIGVESPNEM 585
            +IN+ L ++GV++P +M
Sbjct: 544 IVINNMLRLLGVDAPEKM 561


>gi|295105829|emb|CBL03372.1| arginyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 578

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 190/568 (33%), Positives = 308/568 (54%), Gaps = 40/568 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPRD A+G  ++  AM  ++    +P  IA++IV  +  +  V SV IAG GFIN+ 
Sbjct: 36  ALERPRDEANGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDLVQSVDIAGPGFINIR 95

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+PS L+ + +       ++GR  I +G  K+N+E++SANPTGP+HVGH R A +GD  A
Sbjct: 96  LAPSALQGVAAQARAEKGDFGRGTIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 155

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  +GY+V  E+YINDAG Q++    SV  RYQQ L   D ++PE  Y G Y+K + +
Sbjct: 156 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 214

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP- 270
            + D+   + L+   ++ +   ++ +    +       +      + + SE   +  D  
Sbjct: 215 AIIDEDGDKWLDADPKERMENFRERAYAYELAEQHRVTERFGTTFECWFSERSLYVPDET 274

Query: 271 --SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             S +   ++ +  +GY+Y       K   T           F+S+   D+ DR L+K++
Sbjct: 275 GKSAVDRSLEAMDAKGYIY------VKDGAT----------WFKSSAFDDEKDRVLIKAN 318

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TYF +D+AY   K ERGFD++I + G+DH GY+ R EA+ AA     A + ++L +L
Sbjct: 319 GEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGWPGA-LEIMLGQL 377

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L+RDG  ++MSKR G+ IT   ++DEVG D+ R++ML + + + +DFD    K++   
Sbjct: 378 VNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPIDFDIEVAKKKDAS 437

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQESEFD----TSELQ 497
           NPV+YVQYA+AR  SI R+A D          ++  D     VIP + +       SEL 
Sbjct: 438 NPVYYVQYAHARICSILRKAADPADAAAAEAGEMSMDELAAKVIPADVDLSPLTHESELA 497

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  + ++  ++  A   +  ++L  Y  DLAS+FH  +++         V      +T 
Sbjct: 498 LMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH-------VIGEEEAVTN 550

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL LV A   ++   L+++GV +P +M
Sbjct: 551 ARLALVDATRIVLAKTLDLLGVTAPAKM 578


>gi|160871916|ref|ZP_02062048.1| arginyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120715|gb|EDP46053.1| arginyl-tRNA synthetase [Rickettsiella grylli]
          Length = 587

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 205/593 (34%), Positives = 307/593 (51%), Gaps = 71/593 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI---DPDVDSVFIAGKGF 88
           I I+  R   HG  S+N A++L++ L + PL +AE I A I     +  ++ + +AG GF
Sbjct: 27  IQIDYARGKLHGDFSSNIALVLAKQLNVQPLQLAEKIKANIDCCSENSKIEKIEVAGPGF 86

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN +L       ++S I+    ++G + +G+   V IEFVSANPTGP+HVGH R A  GD
Sbjct: 87  INFFLKKWVWHDVISQILTQTNQFGTSNLGRQESVLIEFVSANPTGPLHVGHGRGAAYGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++  L++  GY+V  EYYINDAG Q++ LA SV+ RY + + N   + P   Y G Y++ 
Sbjct: 147 SITRLLSAVGYQVCSEYYINDAGRQMDILATSVWLRYLE-ICNETFNFPSNAYRGNYVQK 205

Query: 209 VGKELADKYSSELLNFPEE---KWLPI------------------------------VKD 235
           + ++L  +Y       P E   K +P+                              V D
Sbjct: 206 IAQQLYTQYGERFFQ-PSELVFKDIPVDEPQGGNKEHHIDSLILQAKTLLGPNGYEKVFD 264

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             + +++  I++DL A  +  D + SE                +L + G+V + I    +
Sbjct: 265 AGLNSILIDIKEDLTAFRVNFDEWFSEK---------------SLFKMGFVNKAI---KR 306

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIY 354
            K   K       L F+ST  GDD DR LL+ +G  TYFAAD  Y      +R F  +I 
Sbjct: 307 LKELGKTYEANGALWFKSTDFGDDKDRVLLRENGQPTYFAADAGYRLYILEKRKFKKIIN 366

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G+DH GY+ R+ AV  A    K     LL +   LYR    I+MS R+G+FITLR + 
Sbjct: 367 VLGADHHGYIPRIHAVIQAFGFPKESFKALLVQFAILYRGDKKIQMSTRSGEFITLRDLR 426

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIF 472
           +EVG+D+ RF  + R+  + +DFD    KEQS  NPV+YVQY YAR  S+ RQ  AK   
Sbjct: 427 EEVGADATRFFYVLRRVDQHMDFDLELAKEQSNANPVYYVQYVYARINSVMRQLAAKQWV 486

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            +    +   + + +  E  T E  L+V L  Y  V+E A +  EP+ LA +L DLA  F
Sbjct: 487 WN---KILGMDSLSELKE--TQEQNLLVLLNRYSEVVELAAVTYEPHILAHFLKDLAQSF 541

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H ++     N  +  V+ +N  L   RL L+ A+A +I +GL+++GV++   M
Sbjct: 542 HVYY-----NSFIFLVENDN--LRNARLNLIAAIAQVIKNGLDLLGVKTLEVM 587


>gi|291612598|ref|YP_003522755.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291582710|gb|ADE10368.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 558

 Score =  313 bits (801), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 193/561 (34%), Positives = 307/561 (54%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP+  +HG  + N AM L++PL   P  IA  ++A +     ++ V IAG GFIN+
Sbjct: 31  VLIERPKQASHGDYACNLAMQLAKPLRKSPRDIANALIAALPKSDVIEKVEIAGAGFINV 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +++ +  + ++  ++ +G  YG   +G G KV +EFVSANPTGP+HVGH R A VGD L 
Sbjct: 91  FITTAAKQDVVHGVLQAGAGYGHVHVGGGRKVGVEFVSANPTGPLHVGHGRGAAVGDCLC 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++  +G+ VTRE+Y NDAG QI+ L LSV  R  + +  +D   PE  Y G Y+  V K
Sbjct: 151 NVLHAAGWNVTREFYYNDAGVQIDNLTLSVQLRC-KGITPDDPSWPESGYRGDYIVDVAK 209

Query: 212 ELADKYSSE-----LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
               K + E     +    +      ++ ++V  + +    DL+A  ++ D+F  E   +
Sbjct: 210 SYMAKETVEADDQHITGKGDVNDAEAIRHFAVAYLRREQDLDLRAFEVEFDVFSLESALY 269

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 + + +  L   G+ YE                    L  R+T  GDD DR + K
Sbjct: 270 T--DGKVEETVQKLIASGHTYE----------------QDDALWLRTTDFGDDKDRVMRK 311

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL 384
           SDG YTYF  D+AY   K+ RGF+ +I   GSDH   + R+ A   A+     K   + +
Sbjct: 312 SDGGYTYFVPDVAYHLDKWRRGFERVINEQGSDHHSTITRVRAGLQALDAGIPKGWPDYV 371

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + ++G  +K+SKRAG ++TLR ++DEVG D+ R+ +  R     L FD    K 
Sbjct: 372 LHQMVTVLKNGEEVKISKRAGSYVTLRDLIDEVGCDATRYFLAARHPDSQLVFDIDLAKS 431

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS +NPV+Y+QYA+AR  ++  Q    +      L   +V   +SE++T   QL+  + +
Sbjct: 432 QSNDNPVYYIQYAHARISTVLAQ----WNGDRLALLHADVGVLDSEYET---QLLQRMID 484

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A     P+ +AFYL +LA+ FH +++        RF+   + KL + RL L+ 
Sbjct: 485 FPQVIETAAEDLAPHLVAFYLKELAADFHSYYNAS------RFL-VEDEKLKLARLALIA 537

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AVA ++ +GL ++GV +P +M
Sbjct: 538 AVAQVLKNGLALLGVSAPEKM 558


>gi|108800862|ref|YP_641059.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870002|ref|YP_939954.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123368893|sp|Q1B531|SYR_MYCSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232810|sp|A1UK06|SYR_MYCSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|108771281|gb|ABG10003.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696091|gb|ABL93164.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 550

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 282/558 (50%), Gaps = 43/558 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN A+ + + +G++P  +A  +   +     + S  +AG GF+NL
Sbjct: 32  VTVERPRNPEHGDYATNLALQVGKKVGVNPRELAGWLAEALTATAGIASAEVAGPGFVNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +  +    I+  I+ S   YG +       +N+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 92  RIEAAAQNVIVGDIITSAERYGHSAALAERNINLEFVSANPTGPIHIGGTRWAAVGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A  G  V REYY ND GAQI+    S+    +          PE  Y G Y+  +  
Sbjct: 152 RLLATQGAAVVREYYFNDHGAQIDRFVSSLIAAAKG------EPTPEDGYAGSYIGDIAA 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  K     L  P+++     +   V  M   I+  L       D+F  ED  H     
Sbjct: 206 QVLAK-DPGALELPDDEMRETFRAIGVDLMFDHIKISLHDFGTDFDVFTHEDSMHT--SG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + + I  L   G +YE      K   T            R+T  GDD DR ++KSDG+ 
Sbjct: 263 RVEEAIARLRENGAIYE------KDGAT----------WLRTTDFGDDKDRVVIKSDGAP 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A DLAYF  K +RGFD  IY++G+DH GY+ RL+A AAA+ +    + V++ ++V L
Sbjct: 307 AYIAGDLAYFLDKRQRGFDLCIYMLGADHHGYIARLKAAAAALGDDPDTVEVMIGQMVNL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG P++MSKRAG  ITL  +V+ +G D+ R+ ++       +D D       S ENPV
Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYSLIRSSVDTPIDIDLALWSSASNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYPR 507
           +YVQYA+AR  ++ R A D+            V+   +  D      E  LI +L E+PR
Sbjct: 427 YYVQYAHARLSALARNAADL-----------GVVADTAHLDLLTHDKEGTLIRNLGEFPR 475

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+E+A   +EP+++  YL DLA  +H  +   R  P+      +   L   RL L  A  
Sbjct: 476 VLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEAPGS---LHQARLALCQATR 532

Query: 568 SIINSGLNIIGVESPNEM 585
            +I +GL I+GV +P  M
Sbjct: 533 QVIANGLAILGVSAPERM 550


>gi|206602542|gb|EDZ39023.1| Arginyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 595

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 207/603 (34%), Positives = 320/603 (53%), Gaps = 41/603 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++YLKE      +   +   + +E P+    G +ST  AM LS  L   P  IAE
Sbjct: 10  ISDTLRSYLKERGQGEDLATLLPKGVRLEFPKKDGFGDISTPVAMHLSAQLKTPPRKIAE 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI---GKGTKV 123
            + + +   P   SV IAG G++N   S + +RK L  I    ++   +L+    +  ++
Sbjct: 70  SLYSFLSGSPLFQSVEIAGPGYLNFTFSETSVRKALLKI----LDTHSDLVFPEDERRRI 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--V 181
            +EFVSANPTGP+HVGH R A  GD L+ ++   G++VT EYYINDAG Q+  L  S  +
Sbjct: 126 LVEFVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCL 185

Query: 182 FWR--YQQALYNNDSDLPEGYYP--GVYLKHVGKE-------LADKYSSELLN--FPEEK 228
            WR  ++    + ++   +G  P  G Y++ + +E       L+ + S   L+   PE  
Sbjct: 186 AWRKLHRMVPESEENAFLKGATPYKGDYIREIAQEMINTPGILSPEESRASLDPEAPETL 245

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGY 285
           +L    +Y+   +M+ IR+DL+  ++  D F SE   H    G  S    +  N  R+  
Sbjct: 246 YLGAFTEYAQSRIMEGIREDLQLFDVPFDAFFSEKILHEKKNGKNSDTVTLWINRIREAS 305

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +       P    ++        L  R+T++GDD DR L++SDG  TYFAAD+AY   K 
Sbjct: 306 LQATDPGVPDVYESEGA------LWLRTTVLGDDKDRVLVRSDGRLTYFAADIAYHALKI 359

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSK 402
           ER FD +I V G+DH GY+ R+ A    +S   +   +  V L +LV L RDG P+ MS 
Sbjct: 360 ERKFDVLIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMST 419

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G+F+TLR V+DEVG D+ RF  L R +   L+FD  K KE+S +NPV+YVQYA+AR +
Sbjct: 420 RGGEFVTLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVK 479

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+ RQA      L  +   R++   E+  + +E  L+  L  +  V+ + +   E + + 
Sbjct: 480 SLLRQADTRGLTLPAEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTLEVHPMT 536

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL DLA  +H  + H     R+   +  +R+LT+ R+ L  AV  ++  GL ++G+ +P
Sbjct: 537 EYLTDLAGRYHHFYFHH----RILSQEPQDRELTIARIALSIAVGRVLEKGLGLLGISAP 592

Query: 583 NEM 585
           + M
Sbjct: 593 DVM 595


>gi|124514654|gb|EAY56166.1| Arginyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 595

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 209/603 (34%), Positives = 315/603 (52%), Gaps = 41/603 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++YL+E      +   +   I +E P+    G +ST  AM LS  L   P  IAE
Sbjct: 10  ISDALRSYLQERGQGEDLATLLPKGIRLEFPKKDGFGDISTPVAMHLSAHLKTPPRKIAE 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI---GKGTKV 123
            + + +   P   SV IAG G++N   S   +RK L  I    ++   +L+    +  +V
Sbjct: 70  SLSSFLSGSPLFQSVEIAGPGYLNFTYSEMSVRKTLLRI----LDTDSDLVFPEDEKRRV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--V 181
            +EFVSANPTGP+HVGH R A  GD L+ ++   G++VT EYYINDAG Q+  L  S  +
Sbjct: 126 LVEFVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCL 185

Query: 182 FWR--YQQALYNNDSDLPEGYYP--GVYLKHVGKELAD-------KYSSELLN--FPEEK 228
            WR  ++    + +    +G  P  G Y++ + +E+ D       + S   L+   PE  
Sbjct: 186 AWRKLHRAVPESEEQAFLKGATPYKGDYIREIAQEMIDTPGILSPEESRAALDPEAPETL 245

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGY 285
           +L    +Y+   +M+ IR+DL   ++  D F SE   H    G  S    +  N  R+  
Sbjct: 246 YLGTFTEYAQGRIMEGIREDLHLFDVPFDAFFSEKILHEKKNGKNSDAVTLWINRIREAS 305

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +       P    ++        L  R+T++GDD DR LL+SDG  TYFAAD+AY   K 
Sbjct: 306 MQASDPEVPDVYESEGA------LWLRTTVLGDDKDRVLLRSDGRLTYFAADIAYHALKI 359

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSK 402
           ER FD +I V G+DH GY+ R+ A    +S   +   +  V L +LV L RDG P+ MS 
Sbjct: 360 ERKFDVLIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMST 419

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G+F+TLR V+DEVG D+ RF  L R +   L+FD  K KE+S +NPV+YVQYA+AR +
Sbjct: 420 RGGEFVTLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVK 479

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+ RQA      L  +   R++   E+  + +E  L+  L  +  V+ + +   E + + 
Sbjct: 480 SLLRQADTRGLSLPSEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTMEVHPMT 536

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL DLA  +H  + H     R+   +  +R+LT  R+ L  AV  ++  GL ++G+ +P
Sbjct: 537 EYLTDLAGRYHHFYFHH----RILSQEPQDRELTTARIALSIAVGRVLEKGLGLLGISAP 592

Query: 583 NEM 585
             M
Sbjct: 593 EVM 595


>gi|114321921|ref|YP_743604.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228315|gb|ABI58114.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 611

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 207/573 (36%), Positives = 311/573 (54%), Gaps = 35/573 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ER RD AHG  + N AM+L+R     P  IA+ +V  +     +D   IAG GFIN 
Sbjct: 55  IQVERARDRAHGDYAANTAMMLARAARRKPREIAQALVGALPGSEYIDRAEIAGPGFINF 114

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+P      +   +    +YGR+ +G G +V +EFVSANPTGP+HVGH R A  G  LA
Sbjct: 115 ILTPQAAWAPVRQALSQAGDYGRSDLGAGRRVMVEFVSANPTGPLHVGHGRGAAFGAALA 174

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A +GY+V REYY+NDAG Q++ LA SV+ RY +A        P+  Y G Y++ +  
Sbjct: 175 DLLAAAGYDVYREYYVNDAGRQMDILAASVWLRYLEAC-GEPVRFPDNGYRGDYVREIAT 233

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDD----FH 266
            LA++   + L  P ++   ++ D    A     R+  + AL  +    + E      F 
Sbjct: 234 GLAEQV-GDALRHPADR---VMADLPPDAAQGGDREQHIDALVRRARALLGEAGYRQVFE 289

Query: 267 RGDPSPIRDIIDNLARQGYVYE-----------GILPPPKSKTTQKCDMDRKQ--LLFRS 313
           +G    + DI D+L   G  Y+           G +    ++ T+     ++   L FRS
Sbjct: 290 QGLNGILADIRDDLEGFGVTYQNWYSERSLTESGQVERALARLTEAGHTYQQDGALWFRS 349

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           +  GDD DR L + +G  TYFA+D+AY   K +RGFD ++ V G+DH GYV R+ A  AA
Sbjct: 350 SAFGDDKDRVLRRENGQTTYFASDVAYHLDKLQRGFDQLVDVWGADHHGYVPRVRAALAA 409

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
             E + +++V L +   LYR    ++MS R+G+F+TLR +  EVG D+ RF  + RK  +
Sbjct: 410 FGEDEQRLSVRLVQFAILYRGQERLQMSTRSGEFVTLRQLRAEVGDDAARFFYVMRKPEQ 469

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            +DFD    K +S +NPV+Y+QYA+AR  S+FRQ  +    L +D   R +   +   + 
Sbjct: 470 HMDFDLELAKSESSDNPVYYLQYAHARICSVFRQLDE--KGLVWDR-ARGLDALDRLGED 526

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANN 552
            E  L+  L  YP VIE+A  A EP+++A YL DLA+  H ++ +H       +F+   +
Sbjct: 527 HEQALVTELGRYPEVIESAAQAHEPHQVAAYLRDLANALHTYYNAH-------QFI-VED 578

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L   RL LV A   ++ +GL ++GV +P  M
Sbjct: 579 AALRDARLCLVAATRQVLRNGLELLGVRAPERM 611


>gi|254295941|ref|ZP_04963398.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157806017|gb|EDO83187.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 594

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/611 (33%), Positives = 318/611 (52%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    G +V
Sbjct: 73  IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALTAAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  + +     R  L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|254482629|ref|ZP_05095867.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214036988|gb|EEB77657.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 561

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/562 (33%), Positives = 298/562 (53%), Gaps = 36/562 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ I+R RD +HG L++N A+ L++    +P  +A LI A +     V    IAG GFIN
Sbjct: 29  KVQIDRTRDKSHGDLASNIALTLAKAAKKNPRELAGLICAALPESDLVAKTEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+ S  + ++ +I+  G  +G + +G G +V +EFVSANPTGP+HVGH R A VGD+L
Sbjct: 89  FFLTDSSSQSVVRTILERGAAFGHSNVGAGRRVQVEFVSANPTGPLHVGHGRGAAVGDSL 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             LM  +G+ V  E+Y NDAGAQI+ LA SV  R    +     D PE  Y G Y+  V 
Sbjct: 149 CRLMMATGWNVASEFYYNDAGAQIDNLARSVQARC-NGMDPQSPDWPEDGYRGGYISDVA 207

Query: 211 K-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                 +  D     +    +   +  ++ ++V  + +    DLKA  +  D++  E   
Sbjct: 208 NAYLAGDTIDAQDQHVTGAADVDDVEAIRQFAVAYLRREQDLDLKAFAVHFDLYFLESSL 267

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  +   +   +  L  QG+ YE                    L  R+T  GDD DR + 
Sbjct: 268 Y--NSGAVEQTVQRLIEQGHTYE----------------QDGALWLRTTDFGDDKDRVMR 309

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INV 383
           KS+G YTYF  D+AY   K++RGF+ +I   G+DH   V R+ A   A+ +   Q   + 
Sbjct: 310 KSEGGYTYFLPDVAYHLNKWQRGFERVINEQGADHHSTVTRVRAGLQALQQDIPQGWPDY 369

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + RDG  +K+SKRAG ++TLR ++DEVG D+ R+ ++ R  S  L FD     
Sbjct: 370 VLHQMVTVMRDGEEVKISKRAGSYVTLRDLIDEVGRDATRYFLVARGPSSQLTFDIDLAL 429

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            QS +NPV+Y+QYA+AR  SI R+ ++       +    + + Q +E    E  L+  L 
Sbjct: 430 SQSNDNPVYYIQYAHARVCSIMRKLEEQGDTWSIEAGLES-LGQLTE--DHEKALMRRLD 486

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P V+ +A    EP+ +A YL +LA  FH  +     N     V  +++ +   RL L 
Sbjct: 487 QFPEVVSHAAENSEPHNVANYLRELAGDFHSWY-----NAHKTLV--DDKSVRDARLALS 539

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  +IN+GL+++GV +P  M
Sbjct: 540 EAVRQVINNGLDLLGVSAPESM 561


>gi|255324499|ref|ZP_05365616.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255298405|gb|EET77705.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 550

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    ++    +++  +L + + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +  +  V    IAG GFIN+ L+     +I++ I+ +G EYG N    G KV
Sbjct: 64  LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ + + + +K  S L    EE       D  V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSALEGSDEEVQEAFRAD-GVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDSALEKLKAEGHMYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ +LV L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +D +    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVDSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V+E A   +EP+++A Y  DLA+VFH  +   +  P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ + L ++GV +P +M
Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550


>gi|167901057|ref|ZP_02488262.1| arginyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 594

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 203/611 (33%), Positives = 318/611 (52%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    G +V
Sbjct: 73  IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  + +     R  L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|330818465|ref|YP_004362170.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370858|gb|AEA62214.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 594

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 205/618 (33%), Positives = 315/618 (50%), Gaps = 79/618 (12%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L + +K++   +K E +   +   I +ERP+  AHG ++ N AM L++PLG +P  +AE 
Sbjct: 13  LADSVKQVVQALKGESEAGFVAPTITLERPKAAAHGDVACNVAMQLAKPLGTNPRQLAEK 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P     V++  IAG GFINL L+ +  + ++ ++      +GR+    G +V
Sbjct: 73  IVAAVTAHPSAAGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAEREAFGRSAHEAGRRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LALS   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNLALSTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFP-----EEKWLPIVKDYS 237
           R  + L   D+D PE  Y G Y+  + ++ LA    S     P     + + +  ++ ++
Sbjct: 193 R-ARGLKPGDADWPEAAYNGEYIADIARDYLAGATVSASDGEPVTGKGDIEDIEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   ++     +   +  L   G  YE         
Sbjct: 252 VAYLRREQDIDLKAFGVRFDQYYLESSLYQ--EGRVESTVQALVDAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K++RGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVAKWQRGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPDAEVSPEQLDEAIITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           QYA+AR  S+  + K        I P    DL P +  P  S        L+  LAEYP 
Sbjct: 474 QYAHARICSVLNEWKSRHGADEAILPGA--DLSPLDSKPAAS--------LLQKLAEYPE 523

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++      R+ L+ A  
Sbjct: 524 MLTHAAGELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRTARIALLAATR 576

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++GV SP++M
Sbjct: 577 QVLANGLAVLGVSSPSKM 594


>gi|308233577|ref|ZP_07664314.1| arginyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943970|ref|ZP_08241435.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491939|gb|EGF23713.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 615

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 193/612 (31%), Positives = 305/612 (49%), Gaps = 78/612 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           ++   IERP D  HG  S+  A+  +R   + P  IA++IV  +  + +V+ V IAG GF
Sbjct: 27  IEDACIERPADADHGDWSSTVALRTARLAHMAPAKIAQIIVDHLPENKEVEKVEIAGPGF 86

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN YL  +    +++ +   G  +G    G G K+N EF+SANPTGP+HVGH R A +GD
Sbjct: 87  INFYLKAAASNDVINDVRAQGSRWGSCDDGHGFKINYEFISANPTGPLHVGHGRWAALGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY----------------------- 185
           ++ +++ F GY+V REYYIND G+Q++    SV  RY                       
Sbjct: 147 SICNVLDFCGYDVFREYYINDHGSQMDVFGGSVAMRYVQLCQIMQEKSCDSNKAYELLLQ 206

Query: 186 --QQALYNNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKW 229
             ++ + + D   PE +              Y G Y+  + KE  D          EEK 
Sbjct: 207 DREEYVLDEDDSHPEKHPFMDAFNEHLGGNSYGGDYIIEIAKEFYDADGDAWYKVDEEKR 266

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR---QGYV 286
               ++ + QAM+  I+     +    D++ SE   +  +   +  +    AR    GY+
Sbjct: 267 CDAFRERAYQAMLSRIKKTCHNVRCDFDLWFSERSLYDKNEQGVSLVDKAFARLDEMGYL 326

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y+                D   L F+ST  GDD DR L+KS+G YTYFA+D+AY   K++
Sbjct: 327 YK---------------TDDGALWFKSTAFGDDKDRVLIKSNGDYTYFASDVAYHWNKFD 371

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG    I + GSDH GY+ R+  V  A+   K Q  V L + V L R+G P++MSKR G 
Sbjct: 372 RGAQLSIDLWGSDHHGYIARVTNVCDALG-FKGQFKVDLGQFVNLLRNGEPVRMSKRRGT 430

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    ++ EVG D+ R+ ++ + +++ +DFD   VKE+S  NPVFYVQYA+AR  SI R
Sbjct: 431 MVPFDELIAEVGVDATRYTLVSKSSNQTIDFDIEAVKEKSNANPVFYVQYAHARICSILR 490

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQE 517
            A  +  + +      + + Q++  +  +L L+VH         L+E+P +I      + 
Sbjct: 491 HAAGV-SEEEAKSLGMDAVAQKAIGNACDLSLLVHPMEAALTRKLSEFPELISGCARDRA 549

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK----LTMMRLQLVHAVASIINSG 573
           P+++  +  +LA  FHG +++       + + +  R+    L+  RL    AV   +   
Sbjct: 550 PFRITHFCEELAGAFHGFYAN------CQVLSSEGRQIDPELSRARLAACDAVRINLEVA 603

Query: 574 LNIIGVESPNEM 585
           L +IGV +P+ M
Sbjct: 604 LKLIGVSAPDVM 615


>gi|126436460|ref|YP_001072151.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|166232809|sp|A3Q3D3|SYR_MYCSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126236260|gb|ABN99660.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 550

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 281/558 (50%), Gaps = 43/558 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN A+ + + +G++P  +A  +   +     + S  +AG GF+NL
Sbjct: 32  VTVERPRNPEHGDYATNLALQVGKKVGVNPRELAGWLAEALTAAAGIASAEVAGPGFVNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +  +    I+  I+ S   YG +       +N+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 92  RIEAAAQNVIVGDIITSAERYGHSAALAERNINLEFVSANPTGPIHIGGTRWAAVGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A  G  V REYY ND GAQI+    S+    +          PE  Y G Y+  +  
Sbjct: 152 RLLATQGAAVVREYYFNDHGAQIDRFVSSLIAAAKG------EPTPEDGYAGSYIGDIAA 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  K     L  P+ +     +   V  M   I+  L       D+F  ED  H     
Sbjct: 206 QVLAK-DPGALELPDGEMRETFRAIGVDLMFDHIKISLHDFGTDFDVFTHEDSMHT--SG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + + I  L   G +YE      K   T            R+T  GDD DR ++KSDG+ 
Sbjct: 263 RVEEAIARLRENGAIYE------KDGAT----------WLRTTDFGDDKDRVVIKSDGAP 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A DLAYF  K +RGFD  IY++G+DH GY+ RL+A AAA+ +    + V++ ++V L
Sbjct: 307 AYIAGDLAYFLDKRQRGFDLCIYMLGADHHGYIARLKAAAAALGDDPDTVEVMIGQMVNL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG P++MSKRAG  ITL  +V+ +G D+ R+ ++       +D D       S ENPV
Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYSLIRSSVDTPIDIDLALWSSASNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYPR 507
           +YVQYA+AR  ++ R A D+            V+   +  D      E  LI +L E+PR
Sbjct: 427 YYVQYAHARLSALARNAADL-----------GVVADTARLDLLTHDKEGTLIRNLGEFPR 475

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+E+A   +EP+++  YL DLA  +H  +   R  P+      +   L   RL L  A  
Sbjct: 476 VLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEAPGS---LHQARLALCQATR 532

Query: 568 SIINSGLNIIGVESPNEM 585
            +I +GL I+GV +P  M
Sbjct: 533 QVIANGLAILGVSAPERM 550


>gi|325124126|gb|ADY83649.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 596

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 193/598 (32%), Positives = 311/598 (52%), Gaps = 79/598 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE ++A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGDG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR +    
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           K +  DL FD+      P  +     +E ++I  LA YP  +  A  A EP+++  YL +
Sbjct: 488 KAVSTDLQFDV--NTARPHAARLSLDAETEIIAKLAAYPDAVLRAANAYEPHQVGNYLKE 545

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 546 LAALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPESM 596


>gi|118468738|ref|YP_889211.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|152031699|sp|Q9X5M0|SYR_MYCS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118170025|gb|ABK70921.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 550

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 189/554 (34%), Positives = 288/554 (51%), Gaps = 35/554 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN A+ L + +G++P  +A  +   +     +    +AG GF+NL
Sbjct: 32  VTVERPRNPEHGDYATNLALQLGKKVGVNPRELAGWLATALTAADGIAVAEVAGPGFVNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +  S    I+++++ +   YG +    G  VN+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 92  RIEASAQGVIITNVLAAEGSYGSSDQYAGRNVNLEFVSANPTGPIHIGGTRWAAVGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A  G  VTREYY ND GAQI+    S+    +          PE  Y G Y+  + +
Sbjct: 152 RLLATQGAAVTREYYFNDHGAQIDRFVNSLIASAKG------EPTPEDGYAGDYIVDIAQ 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  K + ++L  PE++     +   V  M   I+  L       D++  ED  H     
Sbjct: 206 QVIAK-APDVLGLPEDQQRETFRAIGVDLMFTHIKQSLHDFGTDFDVYTHEDSMHT--SG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   I  L   G +YE                    +  R+T  GDD DR ++KSDG+ 
Sbjct: 263 RVDQAITQLREAGSIYE----------------KDGAVWLRTTDFGDDKDRVVIKSDGNA 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A DLAY+  K +RGFD  IY++G+DH GY+ RL+A AAA+ +    + VL+ ++V L
Sbjct: 307 AYIAGDLAYYLDKRKRGFDLCIYMLGADHHGYIARLKAAAAALGDDPDTVEVLIGQMVNL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG P++MSKRAG  ITL  +V+ +G D+ R+ ++       +D D       S ENPV
Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYALIRSSVDTPIDIDLELWSSASNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQYA+AR  ++ R A D+   ++ D    +++  E E       LI +L E+PRV++ 
Sbjct: 427 YYVQYAHARLCALARNAADLGVSVNTDHL--DLLTHEKEG-----ALIRNLGEFPRVLKT 479

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   +EP+++  YL DLA  +H  +   R  P+          L   RL L  A   +I 
Sbjct: 480 AASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEEPGDLHSARLALCRATRQVIA 536

Query: 572 SGLNIIGVESPNEM 585
           +GL I+GV +P  M
Sbjct: 537 NGLAILGVSAPERM 550


>gi|300112762|ref|YP_003759337.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299538699|gb|ADJ27016.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 585

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 208/588 (35%), Positives = 309/588 (52%), Gaps = 62/588 (10%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           DRI ++R RD +HG  ++N  M+L++     P  +A+LIVAR+   P V  V IAG GFI
Sbjct: 28  DRIQVQRTRDKSHGDFASNIPMVLAKEARQKPQKLADLIVARLPEHPWVKKVDIAGPGFI 87

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L+    + ++S I+     +GR   G+G  V++EFVSANPTGP+HVGH R A  GD 
Sbjct: 88  NFTLALPAFQAVVSQILEQKEFFGRCQTGQGKTVHLEFVSANPTGPLHVGHGRGAAYGDA 147

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA L+   GY+V REYY+NDAG Q++ LA+SV+ RY + L       P   Y G Y+ ++
Sbjct: 148 LARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE-LCGETLPFPSNGYQGEYVCNI 206

Query: 210 GK-------ELADKYSSELL-----NFPE---EKWLPI----------------VKDYSV 238
           G+       +L    + E+L     + PE   EK+L                  V + ++
Sbjct: 207 GQYLKIEEGDLPHHSAKEILAGLPADAPEGDREKYLDALILKMKNLLGKNNYRKVFEQAL 266

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             ++  IR+DL   N+ +D + SE    +     ++  I+ L   GY+Y+          
Sbjct: 267 NTILAGIREDLAKFNVTYDEWFSERQLTK--MGMVKIAIERLKAAGYLYQ---------- 314

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FR+T  GD+ DR +++ +G  TYFA+D+AY   K ERG+  +I V G+
Sbjct: 315 ------KDGAWWFRATNFGDEKDRVVIRENGQPTYFASDIAYHLNKLERGYHKIIDVWGA 368

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     Q +V L +   LYR    I+MS R+G+F+TLR +  EVG
Sbjct: 369 DHHGYIPRIKASLQALGADLQQFDVRLVQFAILYRGKEKIQMSTRSGEFVTLRELCQEVG 428

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + R   + +DFD    K QS ENPV+YVQYA+AR  S+F Q K      +F 
Sbjct: 429 KDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYAHARICSVFHQLK----AREFV 484

Query: 479 LFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                      + + S E+ L+  L+ Y  V+E A     P+ LA+YL DLA  FH ++ 
Sbjct: 485 WNSEQGRKHLGKLNESHEVTLLDRLSCYSEVVEGAATQSAPHLLAYYLLDLARDFHTYY- 543

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               N     V  +  +L   RL L+ A   +I +GL ++GV +P  M
Sbjct: 544 ----NAHTFLV--DTPELRDARLALIAATRQVIKNGLTLLGVSAPESM 585


>gi|145596165|ref|YP_001160462.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305502|gb|ABP56084.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 554

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 186/565 (32%), Positives = 301/565 (53%), Gaps = 49/565 (8%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           ++  +ERPR+  HG  ++  A+ LS+ +G+ P  +A  +  ++     V SV IAG GF+
Sbjct: 30  EQTAVERPRNVEHGDYASTLALQLSKKVGVPPRELAAALAEQLGQAVGVKSVEIAGPGFL 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++   IV +G EYGR+    G  +N+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NIRLDAAAAGQLAQVIVETGAEYGRSGRLAGQSINLEFVSANPTGPVHIGGVRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L+ L+  +G  V  EYY NDAG+QI+  A S+               PE  Y G YL  +
Sbjct: 150 LSRLLRATGAAVATEYYFNDAGSQIDRFARSLL------AAAKGEPPPEDGYAGAYLAEI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH-RG 268
            +++  +   ++L   +     + +   V+ M   I+  L+   ++ D + +E D H RG
Sbjct: 204 AQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDLHNRG 262

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   +   ++ L +QG+++E                       R+T  GDD DR L KSD
Sbjct: 263 E---LELALERLRQQGHIFEA----------------DGATWLRTTDFGDDKDRVLRKSD 303

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCE 387
           G +TYFAAD AY+  K ERGF+ ++ ++G+DH GY+ R++A+ A   +   + + +L+ +
Sbjct: 304 GEWTYFAADCAYYLDKRERGFERVVLMLGADHHGYLGRMKAMVACFGDDPGRNLEILIGQ 363

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V L RDG P++MSKRAG  ++L  +VD +G D+ R+ +        +D D       ++
Sbjct: 364 MVNLVRDGAPVRMSKRAGTVVSLEDLVDAIGVDAARYALARYSTDSPIDIDIELWTRATR 423

Query: 448 ENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +NPV+YVQY  AR  S+ R A ++        DF        P+  + D  E +L+  LA
Sbjct: 424 DNPVYYVQYVAARTASVGRNAAEVGLARGGSADFH-------PELLDHD-KENELLKALA 475

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RL 560
           E+P V+  A   +EP+++A YL DLA  +H  + + R  PR       + ++T +   RL
Sbjct: 476 EFPAVVATAAELREPHRIARYLEDLAGAYHRFYDNCRVLPR------GDEEITDLHRARL 529

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A   +I +GL ++GV +P  M
Sbjct: 530 WLNDATRVVIANGLRLLGVAAPERM 554


>gi|269468159|gb|EEZ79861.1| arginyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 570

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 189/579 (32%), Positives = 311/579 (53%), Gaps = 62/579 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++  +D  HG  ++N A++LS+     P  +A+ I+ R+    ++    IAG GFIN 
Sbjct: 29  IRLDHSKDKTHGDFASNIALVLSKQAKCSPQKLAQQIIDRLPNSGEIVKTEIAGPGFINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++S      +L  I+  GI YG   IGKG  V +EFVSANPTGP+HVGH R A  G T+A
Sbjct: 89  FMSQGSNTAVLEQILEQGIGYGCLDIGKGQSVLLEFVSANPTGPLHVGHGRGAAYGATVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +L+   G++V  EYY+NDAG Q++ LA SV+ RY +         P+  Y G Y+  + +
Sbjct: 149 NLLRALGFKVDNEYYVNDAGRQMDILATSVYLRYIET-----DQFPDNGYKGDYIFDIAE 203

Query: 212 EL---------ADKYSSELLNFPEEKWL---------------PIVKDYSVQAMMKIIRD 247
           ++          D  + E     +EK +                 V D ++  ++  I+ 
Sbjct: 204 QVKGVERLDIFTDVCADEKDGGDKEKHIDDLIANCKQALGDDYKKVFDLAIDDILSGIKT 263

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL    +++  + SE      D    +  I +L   G++YE                   
Sbjct: 264 DLSEFGVEYQQWFSEQSLI--DSGRAKTTIKSLQDSGHIYE----------------KDG 305

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L F++T   D+ DR +++ +G +TYFA+D+AY   K+ERG+D +I + G+DH GY+ R+
Sbjct: 306 ALWFKTTDFNDEKDRVVVRDNGIHTYFASDIAYHLEKFERGYDKIINIWGADHHGYIARV 365

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +A   A+  K  ++ +LL +   LYR G  ++MS R+G F+TL+ +  EVG+D+ RF  +
Sbjct: 366 KASVEALGHKSEKLEILLVQFANLYRGGKKVQMSTRSGSFVTLKELRHEVGNDAARFFYV 425

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            RK+ + +DFD    K ++ ENPVFY+QYA+AR  S+ +QA + FP+        +  P 
Sbjct: 426 LRKSEQHMDFDLDLAKSKTNENPVFYIQYAHARICSVLKQADEKFPN-------NSTAPN 478

Query: 488 ESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            S   D +E+ L+  L  Y  V++ + +  EP+ LA+YL DL++ FH +++         
Sbjct: 479 LSLLDDKAEVALVKELNRYKDVLQTSALNYEPHVLAYYLRDLSASFHSYYN------SCE 532

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+   + +L   RL L+ +   ++++GLN++GV +PN M
Sbjct: 533 FL-VEDAQLRSSRLLLIKSAKQLLSNGLNLLGVSAPNSM 570


>gi|139439094|ref|ZP_01772546.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC
           25986]
 gi|133775441|gb|EBA39261.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC
           25986]
          Length = 617

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 196/611 (32%), Positives = 309/611 (50%), Gaps = 74/611 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           LD   IERP D +HG  ++  A+  ++     P  IAE IVA +  DP ++ V IAG GF
Sbjct: 27  LDDCAIERPADTSHGEWTSTMALKSAKLAHCAPRKIAEAIVAHMPEDPAIEKVEIAGPGF 86

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN YLS +    I       G+++ ++ +G G K  +EFVSANP GPMH+GH R A +GD
Sbjct: 87  INFYLSVAVKNAIFGEAREKGMDFAKSNVGGGLKTQVEFVSANPVGPMHIGHGRWAALGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA-------------------- 188
           +L  +M  +GY++ RE+YIND G+Q+NT   S+  RY Q                     
Sbjct: 147 SLCRVMDHAGYDIQREFYINDHGSQMNTFGNSISTRYMQLADIIAKQGVDIDEAHKLLIA 206

Query: 189 -----LYNNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKW 229
                + + + + PE +              Y G Y+     E       + +N   ++ 
Sbjct: 207 DRDAFVADENDEHPETHPYQDNFAETLGKDSYGGDYIIDEAAEFWRTDGDKWVNADPQER 266

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-------SPIRDIIDNLAR 282
           +   ++     M+  +RD   A+N   D + SE   +  D        S +    + L +
Sbjct: 267 MESFRERGYVKMVDNMRDLCHAVNCDFDRWYSERSLYVKDTEGETAGTSAVDRAFEKLDK 326

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            GY+Y                     L FRST +GDD DR L+KSDG YTYFA+D+AY  
Sbjct: 327 MGYLY----------------TKDGALWFRSTDLGDDKDRVLIKSDGEYTYFASDVAYHW 370

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K++R  D++I + G+DH GY++R+  V  A+     +  VLL +LV L R+G P++MSK
Sbjct: 371 DKFQR-VDHVIDIWGADHHGYIERVRCVCDALG-YPGKFEVLLGQLVNLLRNGKPVRMSK 428

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G  +TL+ +VDEVGSD+ R+ ++ + +++++DFD   VK++   NPV+YVQYA+AR  
Sbjct: 429 RKGTMVTLQELVDEVGSDAARYTLISKSSNQMVDFDIEAVKKRDNSNPVYYVQYAHARVC 488

Query: 463 SIFRQAKDIFP----DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATI 514
           SI R+A D+ P    ++         I +  ++    D +EL L   L E   +I +   
Sbjct: 489 SILRRAADVTPEQADEMGMKAVAAKAIGENVDYSLLTDPTELALSRKLNELTDLIASCAR 548

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            + P++L  +  +LA  FH  ++  +  P     +  + +L+  RL    AV   +   L
Sbjct: 549 DRAPFRLTHFAEELAGDFHSFYAACQVLPSEG--RPVDPELSRARLAACDAVRVTLALVL 606

Query: 575 NIIGVESPNEM 585
            ++GV +P +M
Sbjct: 607 TLVGVSAPEQM 617


>gi|189424202|ref|YP_001951379.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420461|gb|ACD94859.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 564

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 191/562 (33%), Positives = 294/562 (52%), Gaps = 36/562 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90
           +VI  P   AHG  + N A+ L++P    P  +AE ++  ++  D  +    IAG GFIN
Sbjct: 31  VVIGTPAQEAHGDFACNIALQLAKPERKSPRQVAESVLLHLQDTDGLIRRAEIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++PS  ++ L  I  +G  YG    G G K  +EFVSANPTGP+H+GH R A +GD L
Sbjct: 91  FFIAPSAWQQCLPLIEQAGPAYGTTDSGAGRKAQVEFVSANPTGPLHIGHGRGAAIGDVL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+A +G++VTRE+Y NDAGAQI+ LALSV  R    +  +D   P   Y G Y+K V 
Sbjct: 151 CRLLAATGWQVTREFYYNDAGAQISNLALSVQARC-LGIETDDPRWPADGYQGEYIKEVA 209

Query: 211 K-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                 E       ++    +   L  ++ ++V A+ +    DL+A +++ D +  E   
Sbjct: 210 TAYLAGETVVAGDQQVTASGDPDDLDAIRRFAVAALRREQDQDLQAFDVRFDHYFLESSL 269

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      +   +  +   G+ YE                    L  R+T  GDD DR + 
Sbjct: 270 Y--SDGKVEAAVQQMIANGHTYE----------------QEGALWLRTTDFGDDKDRVMR 311

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383
           K+DG YTYF  D+AY   K++RGF  ++   G+DH   + R+ A   A++    K     
Sbjct: 312 KTDGGYTYFVPDVAYHLDKWQRGFLRVVNEQGADHHSTITRVRAGLQALNAGIPKGWPEY 371

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + R G  +K+SKRAG ++TLR ++DEVG D+ RF  + RK    L FD    K
Sbjct: 372 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFVMRKPDSQLVFDIDLAK 431

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +QS +NPV+Y+QYA+AR  SIF  A D    L  D  P   +  + E    EL+LI  L 
Sbjct: 432 QQSLDNPVYYIQYAHARICSIFENAADKGIHLP-DQTPDAAVLAQLE-TPEELRLIKWLE 489

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P  +++A    EP+K+ +YL +LA  FH +++  +       V   +  L++ RL L+
Sbjct: 490 SLPETVDDAAQEFEPHKIVYYLTELAGQFHSYYNKSK-------VVTEDTSLSIARLYLL 542

Query: 564 HAVASIINSGLNIIGVESPNEM 585
                +I + L ++GV +P +M
Sbjct: 543 ARTRQVIQNALTLLGVSAPEKM 564


>gi|154249102|ref|YP_001409927.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153038|gb|ABS60270.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 542

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 193/553 (34%), Positives = 303/553 (54%), Gaps = 34/553 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E P +   G  STN A++ ++     P  +A+  V ++   P  D + IAG GFIN  
Sbjct: 24  VVEIPEE-QFGDFSTNIALVGAKYFKKAPRDVAKYFVEKLNGHPMFDEITIAGPGFINFK 82

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +S S+ R  L   + +  E  +    KG K+ +E+ SANPTGP+ VGH R  V+GD L +
Sbjct: 83  VSKSFYRDFLDGFLRNPREIWK-FKNKG-KIILEYGSANPTGPLTVGHGRQIVIGDVLGN 140

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++++ GY+VT+E Y+NDAG QI  LA SV+ RYQQ L   D  +PE  Y G Y+  + K+
Sbjct: 141 ILSYIGYDVTKEMYLNDAGRQIKLLAKSVWARYQQLL-GKDEPIPEDGYRGNYVIDIAKK 199

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +   Y  +     +E+   I + Y+++ + K+    L+ +N + D   SE      D   
Sbjct: 200 VLKDYGEKFDGIWDEEVEEIFRKYALEDITKMFETTLEKINAKFDNVYSEKSLI--DDGT 257

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +++++D L  +G +YE                +   + FR +   +D D+ L+KSDGSYT
Sbjct: 258 VKEVLDILESKGLIYE----------------NEGAIWFRVSDFANDNDKVLIKSDGSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YF  D+AY   K++RG+D  I + GSDH G++ R+EA   A++     +  +L + V L 
Sbjct: 302 YFLTDIAYHYKKFKRGYDLAIDIFGSDHHGHLPRMEAAMKALNIPDDFLVFVLHQFVTLK 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           R    +KMS RAG+F+T+  ++DEVG D+ R+       +  L+FD    K Q+ ENPV+
Sbjct: 362 RGNEVVKMSTRAGEFVTVDELIDEVGRDATRYFFAMVDVNTHLNFDLELAKSQTNENPVY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  S+F  A      L F LF  N+   E+E   SE+++I  ++ +  ++E  
Sbjct: 422 YVQYAHARIASLFENA--TVKGLKFSLFD-NIELLENE---SEMRIIKLISSFDDILERV 475

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YL  LAS FH ++S        + V  +N ++T  RL LV AV  I++ 
Sbjct: 476 RDKLSPHYLTDYLETLASAFHKYYS------EYKIVDQDNPEMTNARLNLVFAVKIILSE 529

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P +M
Sbjct: 530 GLRLLGVSTPEKM 542


>gi|302877425|ref|YP_003845989.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302580214|gb|ADL54225.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 558

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 193/592 (32%), Positives = 313/592 (52%), Gaps = 41/592 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +  +F S +     E   ++  E+  +  ++IERP+  +HG  + N AM L++PL   
Sbjct: 1   MSVVLNFKSHITELFVEAMREVAPEQGSVS-VLIERPKQASHGDYACNLAMQLAKPLRKS 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  ++A +     ++ V IAG GFINL+++ +  + I+ +++ +G  YG   +G+G
Sbjct: 60  PRDIAHALIAALPKSDVIEKVEIAGAGFINLFVTHAAKQAIVHAVLHAGAGYGHLHVGQG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +EFVSANPTGP+HVGH R A VGD L +++  +G+ VTRE+Y NDAGAQI+ L  S
Sbjct: 120 RRVQVEFVSANPTGPLHVGHGRGAAVGDCLCNVLQAAGWNVTREFYYNDAGAQIDNLMRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKD 235
           V  R  + +  +D   PE  Y G Y+  V +     E  +          +   +  ++ 
Sbjct: 180 VQLRC-KGITPDDPSWPEAGYRGDYIADVARAYMACETVEADDQRTTGCGDVDDVVAIRH 238

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DL+A +++ D+F  E   +      + + +  L   G+ YE       
Sbjct: 239 FAVAYLRREQDLDLRAFHVEFDVFSLESALY--SEGKVDETVAGLIASGHTYE------- 289

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  R+T  GDD DR + KSDG YTYF  D+AY   K+ RGF  +I  
Sbjct: 290 ---------QDDALWLRTTDFGDDKDRVMRKSDGGYTYFVPDVAYHLDKWRRGFVRVINE 340

Query: 356 MGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G+DH   + R+ A   A  V   K   + +L ++V + ++G  +K+SKRAG ++TLR +
Sbjct: 341 QGADHHSTITRVRAGLQALDVGIPKGWPDYVLHQMVTVLKNGEEVKISKRAGSYVTLRDL 400

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DEVG D+ R+ +  R     L FD    K +S +NPV+Y+QYA+AR  ++     + + 
Sbjct: 401 IDEVGCDATRYFLAARHPDSQLVFDIDLAKSKSNDNPVYYIQYAHARISTVL----ETWG 456

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                L   NV   +SE++T+ LQ I+   +YP+VIENA     P+ +AFYL +LA+ FH
Sbjct: 457 GERLSLLNANVSLLDSEYETALLQQII---DYPQVIENAAQELAPHLIAFYLKELAAAFH 513

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++  R       V+     L     Q       ++ +GL ++GV +P +M
Sbjct: 514 SYYNASRFLVEDEAVKCARLALIAAAAQ-------VMKNGLALLGVGAPEKM 558


>gi|296138955|ref|YP_003646198.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027089|gb|ADG77859.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 550

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 191/583 (32%), Positives = 301/583 (51%), Gaps = 38/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  L      +  +  ++  +L +R+ +ERPR+  HG  +TN AM +++  G++P  
Sbjct: 4   ADLSELLHATATTVLTERGLDVSVLPERVTVERPRNPEHGDYATNLAMQVAKKAGVNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +D   IAG GF+N+ L+     +++ SI+     +G         +
Sbjct: 64  LATWLAEALASADGIDEATIAGPGFLNIRLAADAQNQLVVSILEQKDAFGHGSTLADQVI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++   G EVTREYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPVHLGGARWAAVGDSLGRVLEAQGAEVTREYYFNDHGAQIDRFARSL-- 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               A     +  P+  Y G Y+  +   +   +   +L+ P+ + +   +   V+ M  
Sbjct: 182 --DAAATGKPT--PDDGYAGDYIGEIAATVVQNHPG-ILDLPDAERVEAFRADGVELMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            I+  L        +F  ED+ F  G    +   +D L  QG +YE              
Sbjct: 237 HIKRTLHEFGTDFAVFTHEDEMFSSG---LVEQSVDQLKAQGNLYE-------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    +ST  GDD DR ++KSDG+  Y A D+AY K K++RGF   IY++G+DH G
Sbjct: 280 --KDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYLKHKFDRGFTLAIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A AAA+    A++ VL+ +LV L +DG P++MSKRAG  ITL  +VD VG D+ 
Sbjct: 338 YIGRLKAAAAAMGYDPARVEVLIGQLVNLVKDGKPVRMSKRAGTVITLDDLVDAVGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++       +D D   + + S ENPV+YVQYA+AR  +I R A ++  +   +    
Sbjct: 398 RYSLIRSSVDTSIDLDLDLLTQASNENPVYYVQYAHARLSAIARSAAELGIEGSTEHLGL 457

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
              P+E +       L+  L E+P V   A   +EP+++A YL +LA  +H  +S  R  
Sbjct: 458 LDNPREGD-------LVRTLGEFPGVAAAAASLREPHRVARYLEELAGAYHRFYSECRVL 510

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P           L   R+ L  A   ++ +GL+++GV +P+ M
Sbjct: 511 P---LGDEEPTDLHRARVALCAATRQVLANGLSLVGVSAPDRM 550


>gi|308177030|ref|YP_003916436.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744493|emb|CBT75465.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 547

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 191/584 (32%), Positives = 317/584 (54%), Gaps = 45/584 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S+ +   L E     ++  ++ + + ++RP+   HG  +TN A+ L +  G+ P   A
Sbjct: 5   ELSAAISACLTEAVAAGEISVEVPETVRVDRPKSREHGDWATNIALQLGKKAGMAPRDFA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +++  R+   P V +V IAG GF+N+ L      ++  +IV +G  YG N    G  VN+
Sbjct: 65  QILATRLASVPGVGAVDIAGPGFLNITLEAGAAGELARTIVEAGSAYGSNEALAGHVVNM 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GD ++ ++  SG  VT EYYINDAG Q+N  A SV+ R 
Sbjct: 125 EFVSANPTGPLHIGHTRWAALGDAISRVLRASGASVTSEYYINDAGNQMNVFARSVYNRI 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                     +PEG YPG Y+K +G  +  + + EL +  E + +P ++D + +A +  I
Sbjct: 185 HGL------PVPEGGYPGEYIKELGDAVLAE-NPELKDLEEAEAIPALRDAAYKAQLADI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L    +  D+F SE   H  +   + D +  L  QG+++               D++
Sbjct: 238 KSTLADFGVSFDVFFSETTLH--ERGAVADAVARLREQGHIF---------------DLE 280

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  R+T  GDD DR L++++G  TYFAAD AY+  K +RGF+  IY++G+DH GYV 
Sbjct: 281 -GAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFEEKIYLLGADHHGYVN 339

Query: 366 RLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           RL+A+AA A  +K   I VL+ +L+ +  +G   K+SKRAG+ I LR +++ +G+D++R+
Sbjct: 340 RLKAIAACAGDDKDKNIEVLIGQLISV--NGA--KLSKRAGNIIELRDLINWIGADALRY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +        +  D  ++K+ + +NPVFYVQYA+AR  +  R A             RN 
Sbjct: 396 SLARFPADSPIALDPEQLKKNTNDNPVFYVQYAHARSAAAARNAA-------AKGVTRND 448

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E +L+  L ++P V+  +   +EP+++A YL  +A  +H  ++  R  P 
Sbjct: 449 FDAALLTDPTENELLAVLGQFPSVVAGSAEFREPHRIARYLEQVAGAYHSWYAATRITP- 507

Query: 545 LRFVQANNRKLTMM---RLQLVHAVASIINSGLNIIGVESPNEM 585
                  +  +  +   RL L  A  +++ +GL ++GV +P  M
Sbjct: 508 ----MGEDEAIAPVHGTRLWLNDAATTVLANGLELLGVSAPERM 547


>gi|331695512|ref|YP_004331751.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950201|gb|AEA23898.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 547

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 284/558 (50%), Gaps = 42/558 (7%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D + +ERPR+  HG  +TN A+  ++  G++P  +A  +   +     + S  IAG GFI
Sbjct: 30  DDVGVERPRNPEHGDYATNVALRTAKKAGVNPRDLATWLAEALAARDGIASAEIAGPGFI 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL L+      ++  ++ +G  YG      G  VN+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NLRLASDAQGAMVGQVLAAGAAYGTGDELAGRSVNLEFVSANPTGPLHLGGTRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +++  G  VTREYY NDAG QI+    S+    +          PE  Y G Y+  +
Sbjct: 150 LGRILSARGAAVTREYYFNDAGGQIDRFVASLVAAAKG------EPAPENGYGGAYIADI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              +        L+ PE     + +   V  M   I+ DL       D++  ED  H+  
Sbjct: 204 AARVV-AAEPGALDSPERD--EVFRRVGVGFMFDEIKSDLHDFGTDFDVWFHEDSLHK-- 258

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +  L   G +YE                       RST  GDD DR ++KSDG
Sbjct: 259 SGAVERSVQELKNSGALYE----------------KDGAWWLRSTEHGDDKDRVVIKSDG 302

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              Y A D+AYF+ K  RGFD +IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V
Sbjct: 303 RPAYIAGDIAYFRDKRARGFDLLIYMLGADHHGYIGRLKAAAAAFGDDPAVVEVLIGQMV 362

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L +DG P++MSKRAG  +T+  +V+ VG D+ R+ ++      +LD D   +  +S +N
Sbjct: 363 NLVKDGTPVRMSKRAGTVVTMNDLVEAVGVDAARYSLIRSSVDSVLDVDLDLLVRRSNDN 422

Query: 450 PVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           PVFYVQYA+AR  S+ R A D+   P ++F L      P+E +       LI  + E+P 
Sbjct: 423 PVFYVQYAHARLASLARNAADVGLTPGVEFGLLEH---PREGD-------LIRTIGEFPE 472

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+  A   +EP+++A YL  LAS +H  +   R  P          +L   RL L  A  
Sbjct: 473 VVRAAAELREPHRVARYLESLASAYHKFYDACRVLP---LGDEEITELHRARLALCVAAR 529

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++GV +P  M
Sbjct: 530 QVLANGLELLGVSAPERM 547


>gi|293611162|ref|ZP_06693460.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826413|gb|EFF84780.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 596

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE ++A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++Y+ 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYQ- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR +    
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           K +  DL FD+            D +E++++  LA YP  +  A  A EP+++  YL +L
Sbjct: 488 KAVSTDLQFDVNAARPHAARLSLD-AEIEILAKLAAYPDTVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPESM 596


>gi|325673536|ref|ZP_08153227.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325555557|gb|EGD25228.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 550

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L   + +ERPR+  HG  ++N AM +++  G +P  
Sbjct: 4   ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     +DS  +AG GF+N+ L+      I++  + SG  YG      G ++
Sbjct: 64  LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q          PE  Y G Y+  +  ++  K     L+ PE +     +   V+ M +
Sbjct: 184 AAQG------EPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +Y                
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + V++ ++V L R G+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D       + ENPV+YVQYA+AR  SI R A D+   L  +     
Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADL--GLGTENPNLG 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  +AEYPRV+  A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL L  A   ++ +GL ++GV +P  M
Sbjct: 512 Q---GDEEATDLTTARLALCAASRQVLANGLELLGVSAPERM 550


>gi|291302994|ref|YP_003514272.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572214|gb|ADD45179.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 550

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 189/559 (33%), Positives = 293/559 (52%), Gaps = 47/559 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR   HG  S+N ++ +++  G  P  +AE I A ++    + +V IAG GF+N+ 
Sbjct: 33  TVERPRVAEHGDYSSNISLQVAKKAGKPPRELAEAIAANLRAVEGIAAVDIAGPGFLNIK 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  +    +   I+ +G  YG N    G K+N+EFVSANPTGP+H+G  R A VGD L  
Sbjct: 93  LDAAATGAVAGKIIEAGDTYGHNDSLNGQKLNLEFVSANPTGPIHIGSVRWAAVGDALGR 152

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +++ SG EVT EYY+NDAG Q++    S+    +         +P   Y G Y+K + K+
Sbjct: 153 VISASGAEVTTEYYVNDAGVQMDLFGASLLAAAKG------EPVPADGYQGDYVKDIAKQ 206

Query: 213 L-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           + AD+   ELL   + +     +   +  M+  I+  L    +  D++ SE   H  D  
Sbjct: 207 IVADR--PELLTSDDPR--QGFRQAGLDLMLAEIKRSLADFGVHFDVYFSEKQLH--DGG 260

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I   +  L   G  +E                    L  R+T  GDD DR L K DG++
Sbjct: 261 DIDAAVAKLTELGATFE----------------SEGALWLRTTDHGDDKDRVLRKEDGTW 304

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVR 390
           TYFAAD AY++ K +RGFD ++Y++G+DH GY+ R++A++A   +   A I +L+ +LV 
Sbjct: 305 TYFAADAAYYRDKRQRGFDPLVYMLGADHHGYIGRMKALSACFGDDPNATIEILIGQLVN 364

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG P++MSKRAG   TL   V  +GSD+ R+ +    +   +D D       S +NP
Sbjct: 365 LKKDGQPLRMSKRAGTITTLDEFVAALGSDAGRYALARYSSDSTIDLDLDLWTSASNDNP 424

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI-PQESEFDTSELQLIVHLAEYPRVI 509
           V+YVQYA+AR  S+ R A ++         P+ +  P+ES+       L+  LA +P+V+
Sbjct: 425 VYYVQYAHARIASLLRNAGELGLSRGESYDPKLLDHPRESD-------LLKQLAGFPKVV 477

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVHAV 566
             A   +EP+++A Y  DLA  +H  +   R  PR       + + T     RL LV A 
Sbjct: 478 ATAAELREPHRVARYAEDLAGAYHRFYDACRVLPR------GDEEFTDTGAARLWLVEAT 531

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ + L ++GV +P  M
Sbjct: 532 RVVLANALRLLGVSAPERM 550


>gi|312876814|ref|ZP_07736792.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796433|gb|EFR12784.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 561

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 196/558 (35%), Positives = 313/558 (56%), Gaps = 36/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN AM L+R L  +P  IA+ I++ + +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G +YG+  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFKKDWLYKVVDVILSEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   + +LPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  D++  +L N   ++    + D++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 215 KEYLDEHGDDLENLSSDERREKLVDFALKRNISLMKEHLRKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + I++L  +GY YE  G L    SK  +                    D  L++++
Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDESLK-----------------DEVLIRAN 315

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +
Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQ 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ 
Sbjct: 376 LVRLVRGKEIVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR   I R   +    LD     ++ I  E      EL+L+  L E P 
Sbjct: 436 DNPVFYVQYAHARTCGILRALSEEGIVLD-----KSKIKVELLQQEEELELLKKLLELPE 490

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            IE A    +  ++  YL DLAS+FH  ++  R       V+  N  L   RL LV  V 
Sbjct: 491 EIEIAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEDLMFTRLSLVECVR 543

Query: 568 SIINSGLNIIGVESPNEM 585
            +I + L ++GV++P +M
Sbjct: 544 IVIKNMLRLLGVDAPEKM 561


>gi|312139159|ref|YP_004006495.1| arginyl-tRNA ligase args [Rhodococcus equi 103S]
 gi|311888498|emb|CBH47810.1| arginyl-tRNA ligase ArgS [Rhodococcus equi 103S]
          Length = 550

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L   + +ERPR+  HG  ++N AM +++  G +P  
Sbjct: 4   ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     +DS  +AG GF+N+ L+      I++  + SG  YG      G ++
Sbjct: 64  LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q          PE  Y G Y+  +  ++  K     L+ PE +     +   V+ M +
Sbjct: 184 AAQG------EPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +Y                
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + V++ ++V L R G+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D       + ENPV+YVQYA+AR  SI R A D+   L  +     
Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADL--GLGTENPNLG 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  +AEYPRV+  A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL L  A   ++ +GL ++GV +P  M
Sbjct: 512 Q---GDEEATGLTTARLALCAASRQVLANGLELLGVSAPERM 550


>gi|311740633|ref|ZP_07714460.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304153|gb|EFQ80229.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 550

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    ++    +++  +L + + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +  +  V    IAG GFIN+ L+     +I++ I+ +G EYG N    G KV
Sbjct: 64  LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ + + + +K  S L    EE       D  V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSALEGSDEEVQEAFRAD-GVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDAALEKLKAEGHMYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ +LV L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +D +    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVDSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V+E A   +EP+++A Y  DLA+VFH  +   +  P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ + L ++GV +P +M
Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550


>gi|299771958|ref|YP_003733984.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298702046|gb|ADI92611.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 596

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 192/598 (32%), Positives = 310/598 (51%), Gaps = 79/598 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE ++A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVTDISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVATL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYLREVADVYKDVPEDVQYAEELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
               P   FD+      P  +     +E +++  LA YP  +  A  A EP++L  YL +
Sbjct: 491 STNLP---FDV--NTARPHAARLSLDAETEILAKLAAYPDAVLRAANAYEPHQLGNYLKE 545

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 546 LAALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPESM 596


>gi|332654228|ref|ZP_08419972.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517314|gb|EGJ46919.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 582

 Score =  309 bits (792), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 195/574 (33%), Positives = 306/574 (53%), Gaps = 46/574 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89
           +  IE P+D AHG  +++ AM  ++ L   P  IA+ IV  ++++      V IAG GF+
Sbjct: 36  KATIEIPKDTAHGDYASSFAMAGAKALHKAPRAIAQAIVDNLELEGSYFQKVEIAGPGFL 95

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L P +  ++LS++   G EYG N  G G KV +EFVSANPTGPMH+G+ R  V+GDT
Sbjct: 96  NFTLGPKWYGEVLSAVEQEGAEYGANTEGNGEKVMVEFVSANPTGPMHMGNARGGVLGDT 155

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKH 208
           LA+++   G    +E+Y+NDAG QI+  A+S+  RY Q +   ++   PE  Y G  +K 
Sbjct: 156 LANVLKRDGCNTWKEFYVNDAGNQIHKFAVSINARYMQLIVGEENFPFPEEGYHGDDIKE 215

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + + + DK+     + PEE+ L  + +Y +   +  +  DLK   I +D +  E   H  
Sbjct: 216 LAQAIYDKHGDSWKDLPEEERLDKLAEYGLSVNIPRMESDLKRYGIVYDQWFFESSLH-- 273

Query: 269 DPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   + + ++ L ++G+ YE  G L    +K         K+   R     + VD+  LK
Sbjct: 274 NSGYVAETVELLEKKGWTYEKDGALWLNTTKLL-------KEKFMREGKTQEQVDKLDLK 326

Query: 327 SD------GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
            D      G YTYFAAD+AY + K   RGFD  I + G+DH G+V RL+A    +  +  
Sbjct: 327 DDVLRRGNGFYTYFAADIAYHRNKLAVRGFDKAINIWGADHHGHVARLQAALDGLGLDGS 386

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
            ++ V+L +LV L +DG P++MSKR+G  I L  ++DE+  D+ R+    R ++  LDFD
Sbjct: 387 HRLVVVLMQLVNLMQDGKPVRMSKRSGKTIALHDLLDEISVDAARYFFNSRASTSPLDFD 446

Query: 439 FCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--- 494
                 +  ENPV+YVQYA+AR C  I R A++              +PQ  + D +   
Sbjct: 447 LDLAVREDSENPVYYVQYAHARICSLIARLAEE-----------GAQVPQAGDVDAAVLN 495

Query: 495 ---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
              EL LI  LA++P  I  A    +P ++  YL  LA  FH  ++  R       ++  
Sbjct: 496 TPEELALIKALAQFPEEIHLAARDYDPSRINRYLVALAGDFHRFYNACR-------IKGE 548

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++   RL+L   V S++ +G+ ++GV +P +M
Sbjct: 549 EPQVLGARLKLADTVRSVLANGMGLLGVSAPEKM 582


>gi|74318800|ref|YP_316540.1| arginyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|109895051|sp|Q3SF80|SYR_THIDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|74058295|gb|AAZ98735.1| arginyl-tRNA synthetase, class Ic [Thiobacillus denitrificans ATCC
           25259]
          Length = 557

 Score =  309 bits (792), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 202/560 (36%), Positives = 288/560 (51%), Gaps = 42/560 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IERP++  HG  S+NAAM L+RPL  +P  +A+LIV  +     V    IAG GFIN +L
Sbjct: 32  IERPKNPTHGDFSSNAAMQLARPLKRNPRELAQLIVTELPASTLVAKADIAGAGFINFHL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+    I+  +  +G ++GR       +V IEFVSANPTGP+HVGH R A +GD L +L
Sbjct: 92  TPAAWHGIVRQVRTAGAQFGRAQRETPQRVLIEFVSANPTGPLHVGHGRQAALGDALCNL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212
            A  G++V RE+Y NDAG QI TLA SV  R  + L   D+  PE  Y G Y+  + ++ 
Sbjct: 152 YAAQGWDVYREFYYNDAGVQIATLAASVQAR-ARGLQPGDATWPEAAYNGDYIADIARDF 210

Query: 213 LADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           LA K       E     +   L  ++ ++V  +      DL+A  +  D +  E   +  
Sbjct: 211 LAGKTVKSDDREFTASGDVDDLDSIRQFAVAYLRHEQDLDLRAFAVHFDNYYLESSLYTD 270

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +   +  L   G  YE                    L  R+T  GDD DR + KSD
Sbjct: 271 --GRVDATVQRLVAAGKTYE----------------QDGALWLRTTEYGDDKDRVMKKSD 312

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLC 386
           G+YTYF  D+AY   K+ERGF   I + G+DH G + R+ A   AA+V   +   + LL 
Sbjct: 313 GTYTYFVPDVAYHIAKWERGFARAINIQGTDHHGTIARVRAGLQAASVGIPEGYPDYLLH 372

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK      FD      ++
Sbjct: 373 TMVRVMRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKADTEYVFDIDLALARN 432

Query: 447 KENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            +NPV+YVQYA+AR CR     + D+    D DL P             EL L+  LAEY
Sbjct: 433 NDNPVYYVQYAHARICRVFEEWSGDVATLADADLAPLEA--------AHELALMQRLAEY 484

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  + +A     P+ L  YL  LA  FH  W +       +F+ A+       RL L  A
Sbjct: 485 PETVASAARDLAPHLLVHYLQMLAGDFHA-WYNAE-----KFLVADE-ATKRARLALADA 537

Query: 566 VASIINSGLNIIGVESPNEM 585
              +I +GL ++GV++P +M
Sbjct: 538 TRIVIVNGLALLGVDAPEKM 557


>gi|323516220|gb|ADX90601.1| arginyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 596

 Score =  309 bits (792), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 310/597 (51%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIEEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++ + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L F++            D +E +++  LA YP V+  A  A EP+++  YL +L
Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|83721308|ref|YP_440913.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167579622|ref|ZP_02372496.1| arginyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167617702|ref|ZP_02386333.1| arginyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257140433|ref|ZP_05588695.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|109894978|sp|Q2T1N6|SYR_BURTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83655133|gb|ABC39196.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 594

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 203/611 (33%), Positives = 315/611 (51%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE 
Sbjct: 13  LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAER 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IVA +   P     VD+  IAG GFINL L+P+  + ++ ++   G  +G +    G +V
Sbjct: 73  IVAALTAQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREHGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   
Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D+  PE  Y G Y+  +      G+ +A      +    +   L  ++ ++
Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDADDLEAIRKFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE         
Sbjct: 252 VAYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIAAGMTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R ++ 
Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           DE     G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ +A  
Sbjct: 474 QYAHARICSVLNEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAN 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL +LAS FH  ++  R       V  +       R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARIALLAATRQVLENGL 583

Query: 575 NIIGVESPNEM 585
            ++GV +P++M
Sbjct: 584 AMLGVSAPSKM 594


>gi|50083449|ref|YP_044959.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81393974|sp|Q6FFM0|SYR_ACIAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49529425|emb|CAG67137.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 596

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 187/597 (31%), Positives = 307/597 (51%), Gaps = 75/597 (12%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            + R +D +HG  ++N AM+ S+  G+ P  +AE I+A +    D+    IAG GFIN +
Sbjct: 31  TLTRTKDRSHGDFASNIAMVGSKAAGMKPRDLAEKILASLPEVADITKAEIAGPGFINFF 90

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+      +L  I   G  YG+  +    K+ +EFVSANPT  +HVGH R A  G T+A+
Sbjct: 91  LNADQRFAVLDQIQAQGQYYGQTQVNAEKKIQVEFVSANPTSSLHVGHGRGAAYGMTVAN 150

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +G +V REYY+NDAG Q++ LA S + RY + L       P+  Y G Y+K + + 
Sbjct: 151 LLEATGAQVDREYYVNDAGRQMDILATSTYLRYLE-LLGQPLVFPKNAYQGDYVKEIAQS 209

Query: 213 LADK---------------------YSSEL--------LNFPEEKWLP------------ 231
           + DK                     Y+ EL        L+  +EK +             
Sbjct: 210 IIDKDGDAYVRSVADVYRNVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLIGQ 269

Query: 232 ---IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
              +    +++A++  I+DDL    +  D + SE          I + +  L ++GY+YE
Sbjct: 270 GYRVFHQAALKAILDDIKDDLADFGVTFDQWFSEASL----TQKIDEALQTLDQRGYLYE 325

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                               + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG
Sbjct: 326 ----------------KEGNIWFKSTKFGDEKDRVVKRRNGQTTYFASDIAYHLDKLQRG 369

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           + +++ + GSDH GY+ R++A   A+    +++ VLL + V L+R G  ++MS R+G F+
Sbjct: 370 YTHIVDIWGSDHHGYIARVKAAIDAMGYDSSKLTVLLVQFVSLWRGGEMVQMSSRSGQFV 429

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR   +  +A
Sbjct: 430 TLRELRQEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKA 489

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 + F+           + D +E +++  LA YP ++  A  A EP+++  YL +L
Sbjct: 490 NS--TQMRFNQTQARQFANRLDLD-AETEILAKLAAYPDILVRAANAYEPHQIGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V   + +LT  RL L   V  ++ +GL+++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLTEDVELTQARLLLSVNVQQVLRNGLDLLGVSAPEAM 596


>gi|320527004|ref|ZP_08028193.1| arginyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132589|gb|EFW25130.1| arginyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 557

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 200/598 (33%), Positives = 305/598 (51%), Gaps = 63/598 (10%)

Query: 4   FADFSSRLKNYLKEIDCK---IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            +DF S++ + ++E   +   I  +  IL   ++E PRD   G  ST+ AM LSR L   
Sbjct: 7   MSDFESKISSAVREAVKQVYDIDADDSIL---IVETPRDPKMGDYSTSVAMRLSRTLHKS 63

Query: 61  PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           PL IA  IV ++K I  +  S+     GFIN  L    L +++++++ +G +YG+N  G 
Sbjct: 64  PLDIAGPIVEKLKEIYTEASSIEAVKPGFINFRLKKDALAEVINTVINAGDDYGKNNTGA 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H GH R A  GD ++ L   SGY   RE+Y+NDAG QI  L  
Sbjct: 124 GVNVLVEWVSANPTGDLHCGHARNAAWGDCISRLYEASGYNNYREFYVNDAGNQIVMLGE 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY    +     LPE  Y    +  +  ++A+K   + LN    + L   K   V+
Sbjct: 184 SLISRYFDH-FGKKYPLPEDGYHAQDIIDIANQIAEKDGDKWLNADSAERLEYFKKTGVE 242

Query: 240 AMMKIIRDDLKAL-----NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +K I DDLK       N QH+ F  E++  R     I D +  +A  G  YE      
Sbjct: 243 LELKKIEDDLKIYRCDFQNFQHETFFYENNRKR-----INDCLTKMADMGLTYEK----- 292

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                         L F+ST  GDD DR L KSDG+ +Y   D+A    K ERG+D++I 
Sbjct: 293 -----------DGALWFKSTEYGDDKDRVLRKSDGTLSYLTPDIANHIYKIERGYDHLIN 341

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + G+DH  YV R+++   A+      + V + ++VR+  DG  +KMSKR G+ IT+R + 
Sbjct: 342 LWGADHHSYVTRMQSALTALGYPDV-LKVDIIQMVRMVEDGKEVKMSKRTGNAITIRELC 400

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ++VG D+ R+  + +  +  +DFD    + +   NPVFY QYAY+R  SI    K     
Sbjct: 401 EDVGVDAARWFFVSKDVATHMDFDMKLARSKDNNNPVFYAQYAYSRMHSIMNNPK----- 455

Query: 475 LDFDLFPRNVIPQESEFDT-------SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                     IP  ++ DT        ELQL+  ++E+P  + NA  +++P K+  Y+  
Sbjct: 456 ----------IPAFTQVDTYDRLSDEKELQLMKLISEFPIEVANAAASRKPNKITEYIIS 505

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  ++H +++  R N         + +LT  RL LV A    + + LN++GVE+P  M
Sbjct: 506 LVKIYHSYYNSSRVN------NPEDPELTNQRLGLVKATMITLKNALNLVGVEAPESM 557


>gi|303238405|ref|ZP_07324940.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302594109|gb|EFL63822.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 565

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/587 (32%), Positives = 325/587 (55%), Gaps = 33/587 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L +  S  +KN L       ++ +  +  IVIE PR+  HG  STN AM  ++     P 
Sbjct: 8   LKSQISEVVKNSLSRAVASGELPEFEVGEIVIETPREKEHGDFSTNIAMQAAKAAKKAPR 67

Query: 63  TIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA++I+  ++ +   V+ V  AG GFIN YL+  +L   L +I     +YG   +GKG+
Sbjct: 68  QIADIIIKNMEFEGTYVEKVETAGPGFINFYLNNLWLYDTLKTIQTMKDKYGEINVGKGS 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+G+ R   +GD +AS+++ +GY+VTRE+Y+NDAG QI    +S+
Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLSKAGYDVTREFYVNDAGNQIEKFGISL 187

Query: 182 FWRYQQALYNNDS-DLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             RY Q L   D+ + PE GY+    ++H+   +A     +LL+   E+    + ++++ 
Sbjct: 188 EARYIQQLKGEDAVEFPEDGYHGEDIIEHMKDYIAIN-GDKLLSVDSEQRRKELVEFALP 246

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++ IR  +++  ++ D++ SE   +  D   ++D ++ L   G+ YE           
Sbjct: 247 RNIERIRSGMESYGVKFDVWFSEQSLY--DSGELKDTLELLKNNGHTYE----------- 293

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
                    + F+++ +G + D  +++++G  TYFA+D+AY K K+ +R +D +I ++G+
Sbjct: 294 -----KDGAIWFKTSELGTEKDEVIVRNNGLPTYFASDIAYHKNKFLKRNYDRVINLLGA 348

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH G+V R++A   A+     +++V+L +LVRLYR+G   +MSKR G  I+L  +++EVG
Sbjct: 349 DHHGHVARMKAAVKAIDVDPDKLDVVLFQLVRLYRNGEIARMSKRTGKSISLTDLLEEVG 408

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF+   + +   +DFD     +QS ENPV+YVQYA+AR  S+ ++      D +  
Sbjct: 409 RDAARFIFNTKASGSHIDFDLDLAVKQSNENPVYYVQYAHARICSMIKR----LEDENVK 464

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   + +         E++L+  LAEYP  I  A    EP +L  Y+ D+A +FH  ++ 
Sbjct: 465 LQSVDSVDLTKLVAKEEIELMKKLAEYPEEIRIAAETLEPSRLTRYVLDVAGLFHSFYN- 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +   A    L   R+ LV +   +I + L+++ + +P +M
Sbjct: 524 -----ACKVKDAEGDSLRNARVVLVDSTRVVIKNVLDLLSISAPEKM 565


>gi|257455955|ref|ZP_05621172.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257446701|gb|EEV21727.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 605

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 198/602 (32%), Positives = 307/602 (50%), Gaps = 71/602 (11%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D   I R +D AHG  ++N AMI ++    +P  +A+ IVA +     +  V IAG GF
Sbjct: 30  VDNSTISRTKDQAHGDFASNLAMIAAKTAKKNPRELAQTIVAMLPASDMISKVEIAGPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN +L  +    IL +I+    ++G +    G K+ +EFVSANPT  +HVGH R A  G 
Sbjct: 90  INFFLDDNARFAILDTIMQQKGDFGTSEEFAGKKIQVEFVSANPTSSLHVGHGRGAAFGM 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++A+L+   GY+V REYY+NDAG Q++ LA S + RY + L       P   Y G Y+K 
Sbjct: 150 SVANLLEAVGYQVGREYYVNDAGRQMDILATSTYLRYLE-LCGEPIVFPTNAYQGDYVKD 208

Query: 209 V--------GKELADKYSSELLNFPEEKW------------------------------- 229
           +        G  L   +   LLN P +                                 
Sbjct: 209 IAKPIKKQHGDSLKTAWEHMLLNVPADAEYQIDANGEKVCVSGDKEAHIDGLIANAKANL 268

Query: 230 ---LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                I  + ++  ++  I+DDL   N+  D + SE          I   ++ L ++G++
Sbjct: 269 GDNYQIFHEAALSTILADIQDDLADFNVHFDQWFSEKSIQ----DAIVPALELLEQRGFL 324

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y+                    L F+ST  GD+ DR + +++G +TYFA+D+AY K K +
Sbjct: 325 YQ----------------KDGNLWFKSTEFGDEKDRVVRRANGQFTYFASDIAYHKDKLD 368

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG+D +I V GSDH GY+KR++A   A+     +++V+L + V L+R    I+MS R+G 
Sbjct: 369 RGYDKIIDVWGSDHHGYIKRVKAALTAMGYDAQRMDVILVQFVTLWRGTEQIQMSSRSGQ 428

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIF 465
           F+TLR +  EVG+D+ RF  + RK  + +DFD    K  +K+N V+Y+QYA+AR CR + 
Sbjct: 429 FVTLRELRQEVGNDAARFYYVARKPEQHIDFDLELAKSHTKDNAVYYIQYAHARICRVLE 488

Query: 466 R-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R + + I  D       ++ + Q  E D     L+  LA YP V+  A +  EP+ L  Y
Sbjct: 489 RTEERGIKVDDKAGKAHQHRLTQPVETD-----LLSLLASYPEVLRRAAVNYEPHLLTNY 543

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNR-KLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           L DLAS+FHG ++  R  P+       +   L   RL+L  +V  +I +GL ++G+ +P 
Sbjct: 544 LKDLASLFHGWYNDNRILPKDGETPTQDELDLMQARLRLSKSVRQVIQNGLILLGLTAPT 603

Query: 584 EM 585
            M
Sbjct: 604 SM 605


>gi|148377750|ref|YP_001256626.1| arginyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291796|emb|CAL59186.1| Arginyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 539

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 205/586 (34%), Positives = 313/586 (53%), Gaps = 57/586 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   +L++ LKEI   + + + +    + E  +   HG L+TN A+     L  +P+ +A
Sbjct: 5   DLKEKLESKLKEIASSLGITRSVF---LTESKK---HGDLTTNMAL---GNLNTNPMELA 55

Query: 66  ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKV 123
             IV+ I ++   + ++ +A  GFIN  +   YL   ++ I+     YG+ N +GK   V
Sbjct: 56  NQIVSMINLEEFGIKNISVANPGFINFSIGDDYLVSCVNQILKLDKNYGKGNKVGK---V 112

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA S++ 
Sbjct: 113 NVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVVREYYINDAGNQINVLANSLWS 172

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMM 242
           RY+Q  Y +D  +PE  Y G  +    ++   KY  +  N+  + + L +VK+ ++   M
Sbjct: 173 RYKQIFY-SDYSMPEESYKGEDIVWGAQKFYAKYGDKFKNYELDNELLELVKNEAISIFM 231

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I++DL    +  D + SE   +  D   I++ I NL +  Y  +G             
Sbjct: 232 TKIQEDLANFGVWFDNYFSEKSLYENDEVKIKETIKNL-KNAYENDG------------- 277

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVMGSDH 360
                 L  ++T+ GDD DR L+KSDGSYTYF  D+ Y + KY+R G D  +I V G+DH
Sbjct: 278 -----ALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYKRMGADATIINVWGADH 332

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR++     +   +  + VL  +LVRL ++G   KMSKR G    L   V  VG D
Sbjct: 333 SGYVKRMQCAVKDLGLNEQNLVVLCMQLVRLVKNGEEFKMSKRKGTSFFLNEFVKMVGKD 392

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           S RF++L R  +  LDFD      QS +NP   VQYA ARC S+ ++A         ++ 
Sbjct: 393 SARFLLLDRTLNSKLDFDIDLATSQSNDNPAILVQYANARCHSLIKKA---------NID 443

Query: 481 PRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             N+    + FD  S+  LI  L E+P V+E +      + L  YL  LA  F+  +++ 
Sbjct: 444 SNNLYA--TSFDKQSDNSLITTLLEFPSVVEKSADKYATHLLTQYLVKLAKEFNSWYTNS 501

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              P+L  + + N    + ++ LV AV+  I +GL ++ V +P  M
Sbjct: 502 ---PKL--IGSENE---ISKIALVKAVSITIENGLKLLEVSAPVSM 539


>gi|312126952|ref|YP_003991826.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311776971|gb|ADQ06457.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 561

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 199/558 (35%), Positives = 312/558 (55%), Gaps = 36/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN AM L+R L  +P  IA  IV  I +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G +YG+  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFKKDWLYKVVDVILSEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   +  LPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIVLPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  D++  +L N   ++    + D++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + I++L  +GY YE  G L    SK  +                    D  L++++
Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDKSLK-----------------DEVLIRAN 315

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +
Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPEKLIVILMQ 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ 
Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR   I R   +    LD     ++ I  E      EL+L+  L E P 
Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSKIKVELLQQEEELELLKKLLELPE 490

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            IE A    +  ++  YL DLAS+FH  ++  R       V+  N +L   RL LV  V 
Sbjct: 491 EIEMAARNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543

Query: 568 SIINSGLNIIGVESPNEM 585
            +IN+ L ++GV++P +M
Sbjct: 544 IVINNMLRLLGVDAPEKM 561


>gi|255320625|ref|ZP_05361802.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302241|gb|EET81481.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 596

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/598 (31%), Positives = 314/598 (52%), Gaps = 79/598 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI ++  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGAKAAGMKPRDLAEKILANLPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I     +YGR  +    K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAVLDQIQAQKDQYGRTQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVATL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L   D   P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LLGQDLVFPKNAYQGDYVKEIAQGI 210

Query: 214 AD---------------------KYSSE--------LLNFPEEKWLP------------- 231
            D                     +Y++E        +L+  +EK +              
Sbjct: 211 IDLKGEAYVHPVADVYKDVPEDVQYAAEPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    +++A++  I+DDL    +  + + SE          I + +  L ++G++YE 
Sbjct: 271 YRVFHQAALKAILDDIKDDLGEFGVTFNEWFSEASL----TEKIDEALQTLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIEAMGYDSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            + I  ++      R+  P+  E D +E +L+  LA YP ++  A    EP+++  YL +
Sbjct: 491 SNGIVLNVS---TARSHAPR-LELD-AETELLAKLAAYPDIVIRAANVYEPHQVGNYLKE 545

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA++FHG ++  +       V  N+ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 546 LAALFHGWYNEHK-------VLGNDAELTQARLLLSVNVQQVLRNGLELLGVSAPTTM 596


>gi|172040372|ref|YP_001800086.1| arginyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171851676|emb|CAQ04652.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 569

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 196/588 (33%), Positives = 305/588 (51%), Gaps = 44/588 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ S  +    +E+  +  ++  ++ D   +ERPR+  HG  +TN AM  ++  G +P  
Sbjct: 19  AELSEFIARIAREVLTERGLDASVVPDNPTVERPRNPEHGDYATNVAMQTAKKAGTNPRE 78

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +  ++   P++D   +AG GFIN+ L+ +   KI+ +I+ +G ++GR    KGTK+
Sbjct: 79  LGTWLAEKLAASPEIDEASVAGPGFINIRLAAAAQGKIVENILAAGQDFGRGDAYKGTKI 138

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  L+A  G EVTREYY ND G QI+  A S+  
Sbjct: 139 NLEFVSANPTGPIHLGGTRWAAVGDSLGRLLAAQGGEVTREYYFNDHGGQIDRFAKSLL- 197

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL--ADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               A   N+   PE  Y G Y++ +  ++  A+    EL +   ++   + +   V+ M
Sbjct: 198 ----AAARNEP-TPEDGYGGQYIQDIAAQVVEANPTWGELSDADAQE---LFRAQGVELM 249

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              I+  LK    + D+F  E+     +   +   I+ L   G +YE             
Sbjct: 250 FDHIKTTLKQFGTEFDVFFHENSLF--ESGAVDKAIEELKSNGNLYEA------------ 295

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     RS+  GDD DR ++KSDG+  Y A D+AY   K  RG D  IY++G+DH 
Sbjct: 296 ----DGAWWLRSSDFGDDKDRVVIKSDGNAAYIAGDIAYIADKINRGHDLCIYMLGADHH 351

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+ RL+A AAA+     Q+ V++ ++V L RDG  ++MSKRAG  ITL  +V+ +G D+
Sbjct: 352 GYIARLQAAAAALGYDPQQVEVMIGQMVNLVRDGEAVRMSKRAGTIITLDDLVEAIGVDA 411

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFD 478
            R+ ++       LD D      QS ENPVFYVQYA+AR  S+ R+A +    F   D  
Sbjct: 412 ARYALIRSSVDSSLDIDMDLWASQSNENPVFYVQYAHARLCSLQRKADEQGVDFAGADLS 471

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +           E  LI  L E+P+V+  A   +EP+++A Y   LA  FH  +  
Sbjct: 472 LLTHD----------REGTLIRSLGEFPKVVRTAAELREPHRIAHYAEKLAGDFHRFYDA 521

Query: 539 GRENPRL-RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  P+       +   +   RL L  A   ++ + L+++GV +P  M
Sbjct: 522 CQVLPKADEPTGTDAAPVFHARLALAAATRQVLENALSLVGVSAPERM 569


>gi|332875617|ref|ZP_08443429.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|332736190|gb|EGJ67205.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 596

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D++   IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAVLPEVADINKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++ + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L F++            D +E +++  LA YP V+  A  A EP+++  YL +L
Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|169797659|ref|YP_001715452.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156483|ref|YP_001844822.1| arginyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155547|ref|YP_002317592.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215485013|ref|YP_002327254.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239503058|ref|ZP_04662368.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|260557602|ref|ZP_05829816.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347274|ref|ZP_07228015.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510644|ref|ZP_07235881.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301597695|ref|ZP_07242703.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852639|ref|ZP_08434293.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332869354|ref|ZP_08438732.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226701370|sp|B7H2A9|SYR_ACIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701511|sp|B7I1U9|SYR_ACIB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558748|sp|B2I0Y7|SYR_ACIBC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558750|sp|B0VBN5|SYR_ACIBY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169150586|emb|CAM88495.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208077|gb|ACC55475.1| Arginyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213054707|gb|ACJ39609.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987391|gb|ACJ57690.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260408775|gb|EEX02079.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322506351|gb|ADX01805.1| argS [Acinetobacter baumannii 1656-2]
 gi|332729107|gb|EGJ60454.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732772|gb|EGJ63988.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 596

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 310/597 (51%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++ + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L F++            D +E +++  LA YP V+  A  A EP+++  YL +L
Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|83816551|ref|YP_445118.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|109895033|sp|Q2S3W3|SYR_SALRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83757945|gb|ABC46058.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 562

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 193/575 (33%), Positives = 306/575 (53%), Gaps = 58/575 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPD-VDSVFIAGKGF 88
           I +E P    HG L+TN A+ L+  LG +P +IAE +  R++  +DP  + SV +AG GF
Sbjct: 25  IELEAPDRPEHGDLATNTALRLASVLGDNPRSIAETLAERLRERVDPARIKSVEVAGPGF 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   +  YL   L+ ++  G  +G+   G G +  +E+VSANPTGP++VGH R AV+GD
Sbjct: 85  VNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGERALVEYVSANPTGPLNVGHGRNAVLGD 144

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---------------- 192
           T+A+L+A++GY+VTREYY NDAG Q+  LA SV  RY +AL  N                
Sbjct: 145 TIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRARY-EALAGNVPTTTLTLDDDTTVEV 203

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
               PE  Y G Y+  + + L D++   L    +   L   +  +  A+   I   L+AL
Sbjct: 204 PETFPEDGYLGQYIVEIAQALYDEHGDALCATDD---LAPFRAAAETAIFGDIEATLRAL 260

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           NI  D + +E   H  D   +  ++D LA  GY YE                +   L F+
Sbjct: 261 NIDMDGYANEQALH--DEGRVDAVLDGLADAGYTYE----------------EDGALWFK 302

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +T  G + D  L+K  G  TY   D+AY   K+ERGFD M+ V G+DH      + +   
Sbjct: 303 TTEFGTEDDTVLVKQTGEPTYRTPDIAYHTAKFERGFDLMVDVFGADHHAAYPDVLSALD 362

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +     +++V+L + V L R   P+KMS R  +++TL  ++++VG+D  RF  L R   
Sbjct: 363 VLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANYVTLDDLIEQVGADVTRFFFLMRSPD 422

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESE 490
             L+FD    +E+S++NPVFY+QYA+AR  S+  +A+++    D D DL    ++  E  
Sbjct: 423 THLNFDLELAEEESEKNPVFYLQYAHARICSVLDKAEEVGFSHDEDADL---ALLTHE-- 477

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ LI  L  +PR ++NA  A+ P+ +  YL D+A+ F   + + R       +  
Sbjct: 478 ---DEIALIKELLRFPRELQNAADARAPHFVPNYLRDVATAFSQFYDNCR-------IIG 527

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++L   R++L  A  +++ +GL ++G+ +P +M
Sbjct: 528 EEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562


>gi|260551329|ref|ZP_05825530.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405643|gb|EEW99134.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 596

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 309/597 (51%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQSI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDNNAYVRDVADVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++ + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR +    
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           K     L F++            D +E +++  LA YP V+  A  A EP+++  YL +L
Sbjct: 488 KATSTGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|4894688|gb|AAD32590.1|AF126720_1 arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 550

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 189/554 (34%), Positives = 288/554 (51%), Gaps = 35/554 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN A+ L + +G++P  +A  +   +     +    +AG GF+NL
Sbjct: 32  VTVERPRNPEHGDYATNLALQLGKKVGVNPRELAGWLATALTAADGIAVAEVAGPGFVNL 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +  S    I+++++ +   YG +    G  VN+EFVSANPTGP+H+G  R A VGDTL 
Sbjct: 92  RIEASAQGVIITNVLAAEGSYGSSDQYAGRNVNLEFVSANPTGPIHIGGTRWAAVGDTLG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A  G  VTREYY ND GAQI+    S+    +          PE  Y G Y+  + +
Sbjct: 152 RLLATQGAAVTREYYFNDHGAQIDRFVNSLIASAKG------EPTPEDGYAGDYIVDIAQ 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  K + ++L  PE++     +   V  M   I+  L       D++   D  H     
Sbjct: 206 QVIAK-APDVLGLPEDQQRETFRAIGVNLMFTHIKQSLHDFGTDFDVYTHGDWMHT--SG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   I  L   G +YE                    +  R+T  GDD DR ++KSDG+ 
Sbjct: 263 RVDQAITQLREAGSIYE----------------KDGAVWLRTTDFGDDKDRVVIKSDGNA 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A DLAY+  K +RGFD  IY++G+DH GY+ RL+A AAA+ +    + VL+ ++V L
Sbjct: 307 AYIAGDLAYYLDKRKRGFDLCIYMVGADHHGYIARLKAAAAALGDDPDTVEVLIGQMVNL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG P++MSKRAG  ITL  +V+ +G D+ R+ ++       +D D       S ENPV
Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYALIRSSVDTPIDIDLELWSSASNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQYA+AR  ++ R A D+   ++ D    +++  E E       LI +L E+PRV++ 
Sbjct: 427 YYVQYAHARLCALARNAADLGVSVNTDHL--DLLTHEKEG-----ALIRNLGEFPRVLKT 479

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   +EP+++  YL DLA  +H  +   R  P+          L   RL L  A   +I 
Sbjct: 480 AASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEEPGDLHSARLALCRATRQVIA 536

Query: 572 SGLNIIGVESPNEM 585
           +GL I+GV +P  M
Sbjct: 537 NGLAILGVSAPERM 550


>gi|312792767|ref|YP_004025690.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312179907|gb|ADQ40077.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 561

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 193/557 (34%), Positives = 316/557 (56%), Gaps = 34/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN AM L+R L  +P  IA+ I++ + +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G +YG+  IG   KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFKKDWLYKVVDVILSEGDDYGKVNIGNSKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   + +LPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  D++  +L N   ++    + D++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 215 KEYLDEHGDDLENLSSDERREKLVDFALKRNISLMKEHLRKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDG 329
             + + I++L  +GY YE                    L F ++ + +++ D  L++++G
Sbjct: 273 GEVFETIEDLKSRGYTYE----------------KDGALWFAASKIDENLKDEVLIRANG 316

Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
             TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +L
Sbjct: 317 IPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQL 376

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ +
Sbjct: 377 VRLVRGKEIVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVSQQTLD 436

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR   I R   +    LD     ++ I  E      EL+L+  L E P  
Sbjct: 437 NPVFYVQYAHARTCGILRALSEEGIVLD-----KSRIKVELLQQEEELELLKKLLELPEE 491

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           IE A    +  ++  YL DLAS+FH  ++  R       V+  N +L   RL LV  V  
Sbjct: 492 IEIAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVRI 544

Query: 569 IINSGLNIIGVESPNEM 585
           +I + L ++GV++P +M
Sbjct: 545 VIKNMLRLLGVDAPEKM 561


>gi|317057061|ref|YP_004105528.1| arginyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449330|gb|ADU22894.1| arginyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 586

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/577 (32%), Positives = 293/577 (50%), Gaps = 54/577 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLY 92
           IE P D  +G +STNAAM+ ++P    P  IAE IV +I       D V IAG GFIN Y
Sbjct: 39  IEIPADPKNGDVSTNAAMVCAKPFRSAPRKIAEAIVGKIDTTGSCFDKVEIAGPGFINFY 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +   ++ +++  G EYG+   GKG +  +EFVSANPTGPMH+G+ R   +GD LA+
Sbjct: 99  YGKGWFGSVVKAVLDEGKEYGKTDFGKGKRALVEFVSANPTGPMHIGNARGGAIGDCLAA 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDSD-------- 195
           +M ++GY+V RE+YINDAG QI     S+  RY Q            N D D        
Sbjct: 159 VMEYAGYDVEREFYINDAGNQIEKFGKSLRLRYMQICGDKGQEIVAKNLDMDTFCKTIYE 218

Query: 196 ------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                 +P+  Y G+ +    K   D+Y       PEE+    + DY++   +  +  DL
Sbjct: 219 DTETFPMPDDVYLGMDIIAHAKNFFDEYGMIASAQPEEECKKALVDYALPKNIDGLHKDL 278

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               I +D +  E   H  +   ++++ID L   GY YE                    L
Sbjct: 279 AKYRINYDTWFRESTLH--NDGSVQEVIDKLKAGGYTYE----------------KDGAL 320

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLE 368
            FR+T  GD+ DR L++ +G  TYF  D+AY   K   R FD  I + G+DH GY+ RL+
Sbjct: 321 WFRTTDFGDEKDRVLVRDNGIPTYFVPDIAYHYNKLAVRKFDKAIDIFGADHHGYIPRLK 380

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+   + ++++++ ++VRL +DG   K+SKR+G  ITL  +++E+  D+ RF    
Sbjct: 381 AAMTALGVDEKKLDIVIMQMVRLVKDGETYKLSKRSGKAITLNTLLEEIPIDAARFFFNL 440

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R+ +   DFD       S +NPV+YVQYA+AR  S+ ++ K    + + +  P      E
Sbjct: 441 REPNSQFDFDLDLAISNSSQNPVYYVQYAHARICSVIKKLK----EENIEAKPFTADMAE 496

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +     EL+L+  +A  P  I  A  A +P K+  Y  D+A+++H  ++  R       +
Sbjct: 497 ALSTPEELELVKLMATLPTTITEAAKAYDPAKVTKYAVDIATLYHKFYNACR-------I 549

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     +   RL L  AV  II + L+++ ++ P  M
Sbjct: 550 KGEEENVMQARLALSLAVKQIIANILDMLKIDCPESM 586


>gi|262380742|ref|ZP_06073895.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262297690|gb|EEY85606.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 596

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/598 (31%), Positives = 314/598 (52%), Gaps = 79/598 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI ++  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGAKAAGMKPRDLAEKILANLPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I     +YGR  +    K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAVLDQIQAQKDQYGRTQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVATL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L   D   P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LLGQDLVFPKNAYQGDYVKEIAQGI 210

Query: 214 AD---------------------KYSSE--------LLNFPEEKWLP------------- 231
            D                     +Y++E        +L+  +EK +              
Sbjct: 211 IDLKGKTYVHLVADVYKDVPEDVQYAAEPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    +++A++  I+DDL    +  + + SE          I + +  L ++G++YE 
Sbjct: 271 YRVFHQAALKAILDDIKDDLGEFGVTFNEWFSEASL----TEKIDEALQTLGQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIEAMGYDSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            + I  ++      R+  P+  E D +E +L+  LA YP ++  A    EP+++  YL +
Sbjct: 491 SNGIVLNVS---TARSHAPR-LELD-AETELLAKLAAYPDIVIRAANVYEPHQVGNYLKE 545

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA++FHG ++  +       V  ++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 546 LAALFHGWYNEHK-------VLGDDAELTQARLLLSVNVQQVLRNGLELLGVSAPTTM 596


>gi|159039563|ref|YP_001538816.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918398|gb|ABV99825.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 554

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 183/560 (32%), Positives = 298/560 (53%), Gaps = 39/560 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           ++  +ERPR+  HG  ++  A+ LS+ +G+ P  +A  +  ++     + SV IAG GF+
Sbjct: 30  EQTAVERPRNAEHGDYASTLALQLSKKVGVPPRELAAALADQLGQTVGIKSVEIAGPGFL 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++   IV +G EYGR+    G  +N+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NIRLDAAAAGQLAQVIVEAGEEYGRSDRLVGQSINLEFVSANPTGPVHIGGVRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L+ L+  +G EV  EYY NDAG+QI+  A S+               PE  Y G YL  +
Sbjct: 150 LSRLLRATGAEVGTEYYFNDAGSQIDRFARSLL------AAAKGEPPPEDGYAGAYLTEI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +++  +   ++L   +     + +   V+ M   I+  L+   ++ D + +E D H  D
Sbjct: 204 AQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDLH--D 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   ++ L +QG++ E                       R+T  GDD DR L KS+G
Sbjct: 261 RGELELALERLRQQGHISEA----------------DGATWLRTTHFGDDKDRVLRKSNG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388
            +TYFAAD AY+  K ERG++ ++ ++G+DH GY+ R++A+ A   +  A  + +L+ ++
Sbjct: 305 EWTYFAADCAYYLDKRERGYERVVLMLGADHHGYLGRMKAMVACFGDDPAHNLEILIGQM 364

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L RDG P++MSKRAG  + L  +VD +G D+ R+ +        +D D       +++
Sbjct: 365 VNLVRDGAPVRMSKRAGTVVRLEDLVDAIGVDAARYALARYSIDSPIDIDIELWTRATRD 424

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQY  AR  S+ R A ++         P +  P+  + D  E +L+  LAE+P V
Sbjct: 425 NPVYYVQYVAARTASVGRNAAEVGLTRG---QPTDFHPELLDHD-KENELLKALAEFPAV 480

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RLQLVHA 565
           +  A   +EP+++A YL DLA  +H  + + R  PR       + ++T +   RL L  A
Sbjct: 481 VATAAELREPHRIARYLEDLAGAYHRFYDNCRVLPR------GDEEITDLHRARLWLNDA 534

Query: 566 VASIINSGLNIIGVESPNEM 585
              +I +GL ++GV +P  M
Sbjct: 535 TRVVIANGLRLLGVSAPERM 554


>gi|169632154|ref|YP_001705890.1| arginyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|229558749|sp|B0VNJ1|SYR_ACIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169150946|emb|CAO99561.1| arginyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 596

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 310/597 (51%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A+L
Sbjct: 92  NADQRFAILDQIQAQKESFGRSQSNVAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++ + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR + + A
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L F++            D +E +++  LA YP V+  A  A EP+++  YL +L
Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FHG ++  +       V +++ +LT  RL L   V  ++ +GL ++GV +P  M
Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|328955732|ref|YP_004373065.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456056|gb|AEB07250.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 617

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 194/612 (31%), Positives = 301/612 (49%), Gaps = 76/612 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L+   +ERP D ++G  ++  A+  ++  G+ P   AE  +A ++IDP ++ V IAG GF
Sbjct: 27  LEDCGVERPADTSNGEWTSTVALRSAKAAGIAPRAFAEAAIAHMRIDPSIERVEIAGPGF 86

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN YLS      + +     G ++ R+  G G ++ +EFVSANP GP+H+GH R A +GD
Sbjct: 87  INFYLSTGERNAVFARAREQGADFARSSAGAGIRLQVEFVSANPVGPLHIGHGRWAALGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ--------------------- 187
           +L+ +M  +GY+V REYY+ND G Q++    S+  RY Q                     
Sbjct: 147 SLSRVMEHAGYDVEREYYVNDHGNQMDVFGSSISMRYMQLVDIVNKRGVGLETAVQLLSA 206

Query: 188 ---ALYNNDSD---------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              A   +DSD               L    Y G Y+     +L  +         E + 
Sbjct: 207 DRDAYIRDDSDEHPELHPYSDRFIDALGANSYGGEYIIETAADLFRRDGDAWAGASESER 266

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-------GDPSPIRDIIDNLAR 282
           +   ++   + M+  IRD    +    D++ SE   +           S +      L  
Sbjct: 267 MSAFREQGHRKMLDEIRDLCHDVRCDFDVWFSERSLYEKATTGPDAGTSAVDRAFARLRE 326

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            GY+YE                    + FRST +GDD DR L+K++G YTYFA+D+AY  
Sbjct: 327 MGYIYESA----------------GAVWFRSTDLGDDKDRVLVKANGDYTYFASDVAYHW 370

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K++R  D+ I + GSDH GY+ R+ A   A+     +  VLL +LV L R G P++MSK
Sbjct: 371 DKFQR-VDHAIDIWGSDHHGYIGRVRAACDALG-YPGRFEVLLGQLVNLLRSGKPVRMSK 428

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G  +T R +VDEVG+D+ R+ ++ R  ++ +DFD   VKE+S +NPV+YVQYA+AR  
Sbjct: 429 RKGTMVTFRELVDEVGADATRYTLISRSANQTIDFDIDAVKERSMDNPVYYVQYAHARIC 488

Query: 463 SIFRQAKDIFPD----LDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATI 514
           SI R+A  +       L  D      I    ++    D +E  L   L+E   ++ +   
Sbjct: 489 SILRRAAGVDDKQAALLGMDAVAARSIGDRVDYALLTDPTEFALSRKLSELEELVVSCAR 548

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSG 573
            + P++L  +  +LA+ FH  +   +  P   R V A   +L+  RL    AV S+++  
Sbjct: 549 DRAPFRLTHFAEELAADFHSFYGACQVLPSETRPVDA---ELSRARLAACDAVRSVLSLV 605

Query: 574 LNIIGVESPNEM 585
           L +IGV +P  M
Sbjct: 606 LGLIGVSAPESM 617


>gi|257791691|ref|YP_003182297.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475588|gb|ACV55908.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 575

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 193/580 (33%), Positives = 310/580 (53%), Gaps = 64/580 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPRD ++G  ++  AM  ++    +P  IA++IV  +  +  + SV IAG GFIN+ 
Sbjct: 33  ALERPRDESNGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDMIASVDIAGPGFINIR 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + L+ ++++      ++G+  I +G  K+N+E++SANPTGP+HVGH R A +GD  A
Sbjct: 93  LANAVLQGVVAAARAEKDDFGKGEIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  +GY+V  E+YINDAG Q++    SV  RYQQ L   D ++PE  Y G Y+K + +
Sbjct: 153 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDI----------F 259
            + D+          +KWL    D   +  M+  R+   A  +  QH +          +
Sbjct: 212 TIIDEDG--------DKWL----DADPKERMENFRERAYAYELAEQHRVTERFGTTFGCW 259

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            SE   +  D    S +   +  +  +GY+Y                ++     FRS+  
Sbjct: 260 FSERSLYVPDEDGLSAVDRSLKAMDEKGYIY----------------VEDGATWFRSSAF 303

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
            D+ DR L+K++G  TYF +D+AY   K ERGFD++I + G+DH GY+ R EA+ AA   
Sbjct: 304 DDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGW 363

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             A + ++L +LV L+RDG  ++MSKR G+ IT   ++DEVG D+ R++ML + + + +D
Sbjct: 364 PGA-LEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPID 422

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQES 489
           FD    K++   NPV+YVQYA+AR  SI R+A D          D+  D     VIP   
Sbjct: 423 FDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEAAANGDMSMDELASKVIPANV 482

Query: 490 EFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +       SEL L+  + ++  ++  A   +  ++L  Y  DLAS+FH  +++       
Sbjct: 483 DLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH----- 537

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 538 --VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575


>gi|77163574|ref|YP_342099.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254435764|ref|ZP_05049271.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|109895010|sp|Q3JF27|SYR_NITOC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76881888|gb|ABA56569.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207088875|gb|EDZ66147.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 585

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 203/588 (34%), Positives = 311/588 (52%), Gaps = 62/588 (10%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D+I ++R RD +HG  ++N +M+L++     P  +A+LIVAR+   P V  V IAG GFI
Sbjct: 28  DKIQVQRTRDKSHGDFASNISMVLAKEARQKPQKLADLIVARLPEHPWVKKVDIAGPGFI 87

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L+    + ++S ++     +GR   G G  V++EFVSANPTGP+HVGH R A  GD 
Sbjct: 88  NFTLALPAFQAVVSQVLEQKESFGRCRTGHGKTVHLEFVSANPTGPLHVGHGRGAAYGDA 147

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA L+   GY+V REYY+NDAG Q++ LA+SV+ RY + L       P   Y G Y++++
Sbjct: 148 LARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE-LCGETLPFPSNGYQGEYVRNI 206

Query: 210 GK-------ELADKYSSELL-NFP-------EEKWLPI----------------VKDYSV 238
            +       +L    ++E+L   P        EK+L                  V + ++
Sbjct: 207 ARSLKAGEEDLPHHSATEILAGLPADAPTGDREKYLDALIQKIKNLLGKNSYQKVFEQAL 266

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             ++  IR+DL    + +D + SE   H  +   I   I+ L   G++Y           
Sbjct: 267 NTILAGIREDLAKFGVTYDAWFSER--HLTEMGAIEIAIERLKAAGHLY----------- 313

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            QK         F +T  GD+ DR +++ +G  TYFA+D+AY   K E+G+  +I + G+
Sbjct: 314 -QKAGA----WWFYATNFGDEKDRVVIRENGQPTYFASDIAYHLSKLEQGYHKIIDIWGA 368

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     Q+++ L +   LYR    I+MS R+G+F+TLR +  EVG
Sbjct: 369 DHHGYIPRIKASLQALGADLQQLDIQLVQFAILYRGKEKIQMSTRSGEFVTLRELCQEVG 428

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + R   + +DFD    K QS ENPV+YVQYA+AR  S+FRQ K      +F 
Sbjct: 429 KDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYAHARICSVFRQLK----TREFV 484

Query: 479 LFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                      + + + E+ L+  L+ Y  V+E+A I   P+ LA+YL DLA  FH ++ 
Sbjct: 485 WNSEQGREHLGKLNEAHEVTLLDRLSCYSEVVESAAIQSAPHLLAYYLLDLARDFHTYY- 543

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               N     V  +  +L   RL L+ A   +I +GL ++GV +P  M
Sbjct: 544 ----NAHTFLV--DIPELRDARLALIAATRQVIKNGLTLLGVSAPESM 585


>gi|311743944|ref|ZP_07717750.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313074|gb|EFQ82985.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 554

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 180/567 (31%), Positives = 294/567 (51%), Gaps = 38/567 (6%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           + +   + D +++ERP+   HG  +TN A+ L++  G++P  +A+ +   +     V + 
Sbjct: 23  LNLPGGVPDTVLVERPKVREHGDYATNIALRLAKQAGVNPRELAQHLADALVGHDGVAAA 82

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GF+N+ ++      + + ++ +G  YG   +  G ++N+EFVSANPTGP+H+G  
Sbjct: 83  EIAGPGFLNIRVAAGAQGTVAADVLTAGDAYGSGDLYAGQRINLEFVSANPTGPIHIGGV 142

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEG 199
           R A VGD L  ++   G EVTREYY ND GAQI+  A S+    R Q A        PE 
Sbjct: 143 RWAAVGDCLGRILTAVGGEVTREYYFNDHGAQIDRFARSLLASARGQAA--------PED 194

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            Y G Y+  + +++   +     + P+++   + +   V+ M   I+  L    +  D++
Sbjct: 195 GYGGQYIHDIARDVVAVHPGA-ADLPDDEATEVFRAAGVEQMFGEIKASLHDFGVDFDVY 253

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E+D H  +   +   I  L   G +Y+                       R++  GDD
Sbjct: 254 FHENDLH--ESGAVDRAIARLTELGKMYQ----------------SEGATWLRTSDFGDD 295

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
            DR ++KSDG   Y + DLAY+  K ERGFD  + ++G+DH GYV R+ A+ AA   E  
Sbjct: 296 KDRVVVKSDGEPAYISGDLAYYLDKRERGFDRCLIMLGADHHGYVSRMLAMCAAFGDEPG 355

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
             + +L+ ++V L RDG P++MSKRAG  ++L  +V+ +G D+ R+ +        +D D
Sbjct: 356 VNLELLIGQMVNLVRDGEPLRMSKRAGTVVSLEDLVEAIGVDAARYALARYSTDSTIDID 415

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                +   +NPV+YVQYA+AR  SI R A D+   +D + F    +  + E      +L
Sbjct: 416 LDLWAKADSDNPVYYVQYAHARLSSILRNAADLGLGVDLEGFDPGQLSTDREG-----EL 470

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  LAEYPR++  A   +EP+++A YL  +A  FH  +   R  P+      +   L   
Sbjct: 471 LRSLAEYPRLVARAAELREPHRVARYLESVAGSFHQFYDQCRVLPQ---GDEDATDLHRA 527

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL LV A   ++ +GL ++GV +P  M
Sbjct: 528 RLVLVAATRQVVANGLALLGVGAPERM 554


>gi|221199858|ref|ZP_03572901.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221207473|ref|ZP_03580482.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221172676|gb|EEE05114.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180097|gb|EEE12501.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 598

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 205/616 (33%), Positives = 315/616 (51%), Gaps = 62/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V+S  IAG GFINL LS +  + ++ +++  G  +G +   
Sbjct: 72  QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLEQGRAFGTSDRE 131

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAGAQI  LA
Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGAQIGNLA 191

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A K    +    +   L  
Sbjct: 192 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + + +    P+  + Q +    +   L+  LAEYP ++
Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY-NGELAQLPQADLSQLTSPQAAS--LMQKLAEYPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 583 LENGLAMLGVSAPAKM 598


>gi|319944918|ref|ZP_08019180.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319741488|gb|EFV93913.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 575

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 199/601 (33%), Positives = 307/601 (51%), Gaps = 60/601 (9%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           L+  L      I VE ++   +   +ERPR   HG L+TN AM L+RPL   P  +AE +
Sbjct: 9   LRQLLAHTMQAIGVEAELAASVTPSLERPRQADHGDLATNLAMQLARPLKKSPRAVAEQL 68

Query: 69  VARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           VA +   P    +     IAG GFIN  L+P+  ++++  ++  G ++G+     G +V 
Sbjct: 69  VAALMEQPGATDLIAQAEIAGPGFINFRLTPAAHQRVVHEVLTQGEQFGQQ-PSNGQQVM 127

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD L +L+A  G++V RE+Y NDAGAQI+ LALSV  R
Sbjct: 128 LEFVSANPTGPLHVGHGRQAALGDVLGNLLASQGWKVHREFYYNDAGAQIHNLALSVQAR 187

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW------LPIVKDYSV 238
             + +  +D   P   Y G Y+  + +    + + ++   P E        L  V+ ++V
Sbjct: 188 -GRGISPDDPSFPADGYRGDYIAEIARAFVARETVQVNGQPPETATGDLDDLDAVRRFAV 246

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             + +    DL A  +  D +  E   +      + + +  L   G+ +E          
Sbjct: 247 ACLRREQDLDLAAFGVSFDRYYLESSLY--TDGKVEEAVARLVAGGHTFE---------- 294

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR + KS+G YTYF  D+AY   K++RGF   I + GS
Sbjct: 295 ------QDGALWLRTTDYGDDKDRVMRKSEGGYTYFVPDVAYHLGKWQRGFTQAINIQGS 348

Query: 359 DHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-- 414
           DH G V R+ A   A+     K   + +L ++VR+ R+G  +K+SKRAG ++TLR ++  
Sbjct: 349 DHHGTVARVRAGLQALDMGIPKGYPDYVLHKMVRVMRNGEEVKISKRAGSYVTLRDLIEW 408

Query: 415 ----DEV-GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA- 468
               DE  G D+VRF ++ RK      FD      +S ENPV+YVQYA+AR  SI  QA 
Sbjct: 409 SGGGDETRGRDAVRFFLISRKGDTEFTFDVDLALSRSDENPVYYVQYAHARICSILAQAA 468

Query: 469 ----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
               +    +       R   P       +E  L+  +A +P ++  A     P++LA+Y
Sbjct: 469 ERGGQSAGAEGRGAHIDRLTAP-------TEYALMARMAAFPAMLTEAARELAPHQLAYY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L DLA+ FH  ++  R       V  ++ +L   R+ L+ AV +++  G+ +IGV +P  
Sbjct: 522 LKDLAADFHAFYNAER-------VLVDDAELQSARMALLEAVRTVLRRGMALIGVSAPER 574

Query: 585 M 585
           +
Sbjct: 575 L 575


>gi|227547994|ref|ZP_03978043.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079900|gb|EEI17863.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 550

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 194/585 (33%), Positives = 298/585 (50%), Gaps = 42/585 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ ++     +     ++  ++ + + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATAIRQATTTVLTDHDLDATVVPETVTVERPRNPEHGDYATNIALQVAKRAGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +V  +  DP + S  +AG GFINL L+     K+++ I+ +G  YGR+ I  G KV
Sbjct: 64  LAGWLVDALASDPAIASADVAGPGFINLRLAADAQGKLVADILEAGQNYGRSDIYAGEKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  +G EVTREYY ND G QI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAEVTREYYFNDHGGQIDRFARSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+  +   + DK+   L     E      +   V  M  
Sbjct: 184 AAKG------EPTPQDGYGGAYISEIAAGVVDKHEGALEGTDAEVQ-ETFRAAGVDMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    ++ D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKRSLADFGVEFDVYFHENSLF--ESGAVDKAVATLKDNGNLYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K++RG    IY++G+DH GY
Sbjct: 280 -SDGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A A A+      + VL+ ++V L R+G P+KMSKRAG  ITL  +VD +G D  R
Sbjct: 339 IARLRAAAQALGYDADAVEVLIGQMVNLVRNGKPVKMSKRAGTIITLEDLVDAIGVDGAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480
           + +      + LD D      QS +NPV+YVQY +AR  SI R+A +    F D D  L 
Sbjct: 399 YSLARSSVDQTLDIDLDLWTRQSSDNPVYYVQYGHARLCSIARRASEAGVSFADPDLGL- 457

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               +  E E D     LI  L EYP V++ A   +EP+++A Y+ +LAS FH  +   +
Sbjct: 458 ----LAHEKEGD-----LIRTLGEYPAVVKAAAELREPHRVARYVEELASSFHKFYDACQ 508

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P+      +   +   RL L  A   ++ + L+++GV +P  M
Sbjct: 509 ILPK---AGEDAEPIHEARLALAMATRQVLANALDLLGVSAPERM 550


>gi|317487839|ref|ZP_07946432.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316913114|gb|EFV34630.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 578

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 193/580 (33%), Positives = 310/580 (53%), Gaps = 64/580 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPRD ++G  ++  AM  ++    +P  IA++IV  +  +  + SV IAG GFIN+ 
Sbjct: 36  ALERPRDESNGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDMIASVDIAGPGFINIR 95

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + L+ ++++      ++G+  I +G  K+N+E++SANPTGP+HVGH R A +GD  A
Sbjct: 96  LANAVLQGVVAAARAEKDDFGKGEIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 155

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  +GY+V  E+YINDAG Q++    SV  RYQQ L   D ++PE  Y G Y+K + +
Sbjct: 156 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 214

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDI----------F 259
            + D+          +KWL    D   +  M+  R+   A  +  QH +          +
Sbjct: 215 TIIDEDG--------DKWL----DADPKERMENFRERAYAYELAEQHRVTERFGTTFGCW 262

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            SE   +  D    S +   +  +  +GY+Y                ++     FRS+  
Sbjct: 263 FSERSLYVPDEDGLSAVDRSLKAMDEKGYIY----------------VEDGATWFRSSAF 306

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
            D+ DR L+K++G  TYF +D+AY   K ERGFD++I + G+DH GY+ R EA+ AA   
Sbjct: 307 DDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGW 366

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             A + ++L +LV L+RDG  ++MSKR G+ IT   ++DEVG D+ R++ML + + + +D
Sbjct: 367 PGA-LEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPID 425

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQES 489
           FD    K++   NPV+YVQYA+AR  SI R+A D          D+  D     VIP   
Sbjct: 426 FDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEAAANGDMSMDDLASKVIPANV 485

Query: 490 EFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +       SEL L+  + ++  ++  A   +  ++L  Y  DLAS+FH  +++       
Sbjct: 486 DLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH----- 540

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 541 --VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 578


>gi|284123123|ref|ZP_06386895.1| Arginyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283829298|gb|EFC33702.1| Arginyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 528

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 177/503 (35%), Positives = 287/503 (57%), Gaps = 26/503 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINL 91
           +++ P+    G LS++ AM++++     PL +A++I  +++     ++ + +A  GF+N 
Sbjct: 36  IVDFPKREEWGDLSSSVAMVIAKQEKRPPLEVAQMIADQLRTSCTFLEKISVAPPGFLNF 95

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L       +L  I  +G  YG + IG+G +V +EFVSANPTGP+H+GH R A +G+ LA
Sbjct: 96  SLQQDCWFPVLEEIERTGDLYGHSKIGQGQRVLLEFVSANPTGPLHMGHGRGAALGEALA 155

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+  +GYEV +EYYINDAG Q+  LA SV+ RY + ++  +   PE  Y G Y+K + +
Sbjct: 156 RLLRSAGYEVDKEYYINDAGRQMKLLADSVYARYLE-MHGREYSFPEDGYHGDYIKALAQ 214

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDP 270
            +      +LL    E        ++ + +++ I++DL    ++ + + SE   F  G  
Sbjct: 215 AMDRVKGMDLLALNPEDARRECGHWASRELVRAIQEDLAQFGVEFETWYSEASLFASGS- 273

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I+  +++L ++  V+           TQ          FRS+   D+ DR + K DG 
Sbjct: 274 --IQAALNDLEQRDLVF-----------TQD-----DATWFRSSRFQDEKDRVVCKQDGD 315

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTY A+D+AY   K  RG+  +I + G+DH GYV R++AV  A       + V+L ++VR
Sbjct: 316 YTYLASDIAYHFDKLRRGYGWLINIWGADHHGYVPRMQAVIKAFGYGDDCLRVVLVQMVR 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  ++MSKRAG+FITL+ VVDEVG+D+ +F  L R++   L+FD    K+QS ENP
Sbjct: 376 LLRGGNKVEMSKRAGEFITLQDVVDEVGADAAKFFFLMRRSDTHLEFDLELAKKQSNENP 435

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+FR A     +    + P    P  +     E++L+  L+ +P ++E
Sbjct: 436 VYYVQYAHARLASLFRTAH----ERGIRVSPVGEAPLSALVQPEEIRLMKQLSGFPGLLE 491

Query: 511 NATIAQEPYKLAFYLYDLASVFH 533
            + +A EP+++ FYL +LA + H
Sbjct: 492 ASAMALEPHRITFYLLELAGLLH 514


>gi|325830658|ref|ZP_08164079.1| arginine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487404|gb|EGC89846.1| arginine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 575

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 193/580 (33%), Positives = 310/580 (53%), Gaps = 64/580 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPRD ++G  ++  AM  ++    +P  IA++IV  +  +  + SV IAG GFIN+ 
Sbjct: 33  ALERPRDESNGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDMIASVDIAGPGFINIR 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + L+ ++++      ++G+  I +G  K+N+E++SANPTGP+HVGH R A +GD  A
Sbjct: 93  LANAVLQGVVAAARAEKDDFGKGEIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M  +GY+V  E+YINDAG Q++    SV  RYQQ L   D ++PE  Y G Y+K + +
Sbjct: 153 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDI----------F 259
            + D+          +KWL    D   +  M+  R+   A  +  QH +          +
Sbjct: 212 TIIDEDG--------DKWL----DADPKERMENFRERAYAYELAEQHRVTERFGTTFGCW 259

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            SE   +  D    S +   +  +  +GY+Y                ++     FRS+  
Sbjct: 260 FSERSLYVPDEDGLSAVDRSLKAMDEKGYIY----------------VEDGATWFRSSAF 303

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
            D+ DR L+K++G  TYF +D+AY   K ERGFD++I + G+DH GY+ R EA+ AA   
Sbjct: 304 DDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGW 363

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             A + ++L +LV L+RDG  ++MSKR G+ IT   ++DEVG D+ R++ML + + + +D
Sbjct: 364 PGA-LEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPID 422

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQES 489
           FD    K++   NPV+YVQYA+AR  SI R+A D          D+  D     VIP   
Sbjct: 423 FDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEAAANGDMSMDDLASKVIPANV 482

Query: 490 EFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           +       SEL L+  + ++  ++  A   +  ++L  Y  DLAS+FH  +++       
Sbjct: 483 DLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH----- 537

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 538 --VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575


>gi|325521346|gb|EGD00194.1| arginyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 593

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 316/616 (51%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VAPTITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   PD    V++  IAG GFINL L+ +  + ++++++  G  +G +   
Sbjct: 67  QLAEKIVAELTARPDAQGLVEAAEIAGPGFINLRLTAAAKQAVVTAVLAQGRAFGTSERE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A K    +    + + L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + +++    P   + Q +    +   L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVEVAQLPGADLSQLTSPQAA--SLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAMLGVSAPAKM 593


>gi|296119500|ref|ZP_06838058.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967383|gb|EFG80650.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 550

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 192/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  LK    ++     ++  +L + + +ERPR+  HG  +TN A+ +++  G++P  
Sbjct: 4   ADLSLLLKESALQVFESHDLDTSVLPEAVTVERPRNPEHGDYATNVALQVAKKAGVNPRQ 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AE +   +     +D   IAG GF+N+ L+ +   +I+S I  +G  YG        KV
Sbjct: 64  LAEWLAEALAKSDAIDVAEIAGPGFLNIRLAAAAQGEIVSQIAAAGANYGNGEAMADLKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  +   +G  VTREYY ND G QI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRIFEAAGATVTREYYFNDHGGQIDRFARSLV- 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               A   N+   PE  Y G Y+  +  E+  +    L   P E      +   V+ M +
Sbjct: 183 ----AAAKNEP-TPEDGYGGQYIHDIAAEVLRQKDDALEGTPAEVQENF-RSLGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+ DL    +  D++  E+     +   +   +D L   G +YE               
Sbjct: 237 QIKQDLHEFGVDFDVYFHENSLF--ESGAVDKALDQLKTSGQMYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG +  IY++G+DH GY
Sbjct: 280 -TEGAWWLKSTDYGDSKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L RDG+ +KMSKRAG  IT+  +V+ +G D+ R
Sbjct: 339 VPRLKAAAAALGYDADAVEVLIGQMVNLLRDGVAVKMSKRAGTVITMNDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D      QS ENPV+YVQY +AR  SI R+A++    +  D    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWAAQSSENPVYYVQYGHARLCSIQRKAEE--AGVTSDAADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+  +   +EP+++A Y  DLASVFH  +   +  P
Sbjct: 457 LLTHEREGD-----LIRTLGEFPAVVAESAQLREPHRVARYAEDLASVFHKFYDQCQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +   RL L  A   ++ + L ++GV +P +M
Sbjct: 512 K---AGDEAEPIHGARLALAQATRQVLANALGMVGVSAPEKM 550


>gi|161523565|ref|YP_001578577.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351665|ref|YP_001947293.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221211064|ref|ZP_03584043.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|238687040|sp|A9AE58|SYR_BURM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|160340994|gb|ABX14080.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335687|dbj|BAG44757.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221168425|gb|EEE00893.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 598

 Score =  306 bits (784), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 204/616 (33%), Positives = 314/616 (50%), Gaps = 62/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V+S  IAG GFINL LS +  + ++ +++  G  +G +   
Sbjct: 72  QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLAQGRAFGTSDRE 131

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGVQIGNLA 191

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A K    +    +   L  
Sbjct: 192 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + + +    P+  + Q +    +   L+  LAEYP ++
Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY-NGELAQLPQADLSQLTSPQAAS--LMQKLAEYPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 583 LENGLAMLGVSAPEKM 598


>gi|313678427|ref|YP_004056167.1| arginine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950101|gb|ADR24696.1| arginine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 539

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 204/584 (34%), Positives = 311/584 (53%), Gaps = 53/584 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   +L+N L+EI   + +++ +    + E  +   HG LSTN A+  S    L+P+ +A
Sbjct: 5   DLKEKLENKLREIASDLGIQRNVF---LTESKK---HGDLSTNMALGNSN---LNPMELA 55

Query: 66  ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             I++ I      + ++ +A  GFIN  +   YL   ++ I+  G  YG+    K  KVN
Sbjct: 56  RKIISMIDAGEFGIKNMTVANPGFINFSIGDDYLVSGVNQILHLGSNYGKG--NKLGKVN 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA S++ R
Sbjct: 114 VEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVNREYYINDAGNQINVLANSLWAR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMK 243
           Y+Q  Y  D  +PE  Y G  +    ++  +KY  +  +   + + + +VK+ ++   M 
Sbjct: 174 YKQIFY-PDFQMPEESYKGEDIIWGAQKFYEKYKDKYKDCELDTELIKLVKEEAISIFMA 232

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++DL    ++ D + SE   +  D + I++ I NL +  Y  +G              
Sbjct: 233 KIQEDLANFGVKFDTYFSEKSLYENDGAKIKETIKNL-KNAYESDG-------------- 277

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVMGSDHS 361
                L  ++T+ GDD DR L+KSDGSYTYF  D+ Y + KY R G D  +I V G+DHS
Sbjct: 278 ----ALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYRRMGKDATIINVWGADHS 333

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYVKR++     +      + VL  +LVRL ++G   KMSKR G    L   V  VG DS
Sbjct: 334 GYVKRMQCAVRDLGLNDNNLVVLCMQLVRLIKNGEEFKMSKRKGTSFFLSEFVKMVGKDS 393

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF++L R  +  LDFD      QS +NP   VQYA ARC S+ ++A         D   
Sbjct: 394 ARFLLLDRTLNSKLDFDIDLATSQSNDNPAILVQYANARCHSLIKKAS-------VDTSN 446

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + I  + + D +   LI  L E+P VIE +      + L  YL  LA  F+  +++   
Sbjct: 447 LSAISYDKQSDNN---LITKLLEFPLVIEKSADKYATHLLTQYLVKLAKEFNSWYTN--- 500

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P+L  + ++N +    ++ LV AV+  I +GL ++ V +P  M
Sbjct: 501 SPKL--IGSDNEQ---SQIALVKAVSITIENGLKLLEVSAPTSM 539


>gi|326203285|ref|ZP_08193150.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986543|gb|EGD47374.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 564

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 197/558 (35%), Positives = 301/558 (53%), Gaps = 34/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I IE PR+  HG  STN AM +++     P  IA+ I+  I  D   +  V  AG GFIN
Sbjct: 37  ITIEIPREKGHGDFSTNVAMQITKTAKKAPRQIADTIIKNIITDGTYIKKVDCAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L  SYL + +S I      YGR  IG G KV +EFVSANPTGP+H+G+ R   +GD +
Sbjct: 97  FTLDNSYLYETISIIEQEKENYGRIDIGNGKKVMVEFVSANPTGPLHMGNARGGALGDCI 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHV 209
           AS++  +GY VTRE+ INDAG QI     S+  RY Q +   D+ + PE  Y G  +   
Sbjct: 157 ASVLDAAGYNVTREFLINDAGNQIEKFGTSLEARYIQLIKGEDAIEFPEDGYHGEDIAEH 216

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++    +  + +N   E+   I  D+++   +  I++ L++  I  D++ SE   H+  
Sbjct: 217 MRDFIAIHGDKYINTDSEERKKIFVDFALPRNIARIKEGLESYGIHFDVWFSEQTLHK-- 274

Query: 270 PSPIRDIIDNLARQGYVYEGI-LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                         G V E I L   +  T +K       L  + +++G + D  L++++
Sbjct: 275 -------------SGEVAETIQLLKDRDCTVEK----EGALWLKGSVIGSEKDEVLVRNN 317

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGF+ +I + G+DH G+V R++A  AA+     +++V+L +
Sbjct: 318 GIPTYFAADIAYHRNKFEKRGFEWVINLWGADHHGHVARMKAAMAAIGVDPDRLDVVLFQ 377

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRLYR+G   +MSKR G  I+L  +V+EVG D VRF    + +   LDFD     ++S 
Sbjct: 378 LVRLYRNGEIARMSKRTGKSISLMDLVEEVGRDGVRFFFNTKASGSHLDFDLDLAVKESN 437

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ENPVFYVQYA+AR  S+F+    +       L   + I  E      EL+LI  L+EYP 
Sbjct: 438 ENPVFYVQYAHARICSMFK----LLESEGIRLPAASEIKAELLDKLEELELIRKLSEYPD 493

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  +    EP +L  Y++++AS FH  ++  R       V+    +L   RL LV+   
Sbjct: 494 EVRISAETLEPSRLTRYVHEVASTFHSFYNACR-------VRGEEEELMKARLVLVNCTR 546

Query: 568 SIINSGLNIIGVESPNEM 585
           ++I + L+++ + +P  M
Sbjct: 547 TVIKNVLDLLSINAPERM 564


>gi|313631877|gb|EFR99036.1| arginyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 441

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 264/473 (55%), Gaps = 39/473 (8%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
            GKG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G+ V+REYYINDAG QIN 
Sbjct: 4   FGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGFNVSREYYINDAGNQINN 63

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  
Sbjct: 64  LVLSAEARYFEAL-GLESNFPEDGYRGADIISLGKDLAAKYGDKYVNTSEEERRSVFRVD 122

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++      +R DL+   +  D + SE   +  + + +   ++ L   GY+YE        
Sbjct: 123 ALDFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE-------- 172

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   D    L R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + 
Sbjct: 173 -------QDGATWL-RTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIW 224

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++E
Sbjct: 225 GADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEE 284

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIF 472
           VG D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K    D+ 
Sbjct: 285 VGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVS 344

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            + D  L     +  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ F
Sbjct: 345 KEADMSL-----LQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAF 394

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  ++        + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 395 HRFYNSN------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 441


>gi|262281322|ref|ZP_06059103.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257148|gb|EEY75885.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 596

 Score =  306 bits (783), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 190/597 (31%), Positives = 309/597 (51%), Gaps = 77/597 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R +D +HG  ++N AMI S+  G+ P  +AE ++A +    D+    IAG GFIN +L
Sbjct: 32  LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVVDISKAEIAGPGFINFFL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      IL  I      +GR+      K+ +EFVSANPT  +HVGH R A  G T+A L
Sbjct: 92  NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVAKL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +G +V REYY+NDAG Q++ LA S + RY + L  N    P+  Y G Y+K + + +
Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTI 210

Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231
            DK                     Y+ EL        L+  +EK +              
Sbjct: 211 IDKDGDAYLREVADVYKDVPEDVQYAEELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEG 270

Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +    ++ A++  I+DDL    +  + + SE        + I + ++ L ++G++YE 
Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAEIDEALETLDQRGFLYE- 325

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG+
Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+T
Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468
           LR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR CR +    
Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           K +   L FD+            D +E +++  LA YP  +  A  A EP+++  YL +L
Sbjct: 488 KALSTGLQFDVNAARTHATRLSLD-AETEILAKLAAYPDAVLRAANAYEPHQVGNYLKEL 546

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++FH  ++  +       V +++ +LT  RL L   V  ++++GL ++GV +P+ M
Sbjct: 547 AALFHAWYNEHK-------VLSDDAELTQARLLLSINVQQVLHNGLELLGVSAPDSM 596


>gi|227542588|ref|ZP_03972637.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181786|gb|EEI62758.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 549

 Score =  306 bits (783), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 185/557 (33%), Positives = 292/557 (52%), Gaps = 34/557 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + + +ERPR+  HG  +TN A+ +++  G++P  + + +   +  DP ++S  IAG GFI
Sbjct: 26  EEVTVERPRNPEHGDYATNLALQVAKKAGMNPRELGQKLADALSEDPAIESAEIAGPGFI 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL L+ +   +I++ ++  G ++G + +  GTK+N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 86  NLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKINLEFVSANPTGPIHLGGTRWAAVGDS 145

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++ FSG EVTREYY ND G QI+  A S+    +          PE  Y G Y+K +
Sbjct: 146 LGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAAAKG------EPTPEDGYGGDYIKDI 199

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              +  +  + L    EE      + + V+ M   I+  L       D+F  E+     +
Sbjct: 200 AAAVVQEVPTALEGSDEEVQ-ETFRAHGVEMMFDHIKKSLAEFGTHFDVFFHENSLF--E 256

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   ++ L   G +YE                       +ST  GDD DR ++KSDG
Sbjct: 257 SGAVEKAVEKLKSSGELYEA----------------DGAWWLKSTDYGDDKDRVVIKSDG 300

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y A D+AY   K++RG D  IY++G+DH GY+ RL+A AAA+     ++ V++ ++V
Sbjct: 301 NAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYIARLKAAAAALGYDADRVEVMIGQMV 360

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG  +KMSKRAG  ITL  +V+ +G D+ R+ ++       LD D      QS +N
Sbjct: 361 NLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARYSLIRSSVDSTLDIDLDLWAAQSSDN 420

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           PV+YVQY +AR  S+ R+A+ I   + D D    +++  E E D     LI  L E+P V
Sbjct: 421 PVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLSLLTHEREGD-----LIRTLGEFPSV 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +A   +EP+++A Y   LA+ FH  +      P           + + R  L  A   
Sbjct: 476 VASAAELREPHRIARYAEQLAATFHRFYDTCHVLPGQ---DEEVEPIHVARFALAMATRQ 532

Query: 569 IINSGLNIIGVESPNEM 585
            + + L ++GV +P  M
Sbjct: 533 TLANALGLVGVTAPERM 549


>gi|227487946|ref|ZP_03918262.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092037|gb|EEI27349.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 549

 Score =  306 bits (783), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 185/557 (33%), Positives = 292/557 (52%), Gaps = 34/557 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + + +ERPR+  HG  +TN A+ +++  G++P  + + +   +  DP ++S  IAG GFI
Sbjct: 26  EEVTVERPRNPEHGDYATNLALQVAKKAGMNPRELGQKLADALSEDPAIESAEIAGPGFI 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL L+ +   +I++ ++  G ++G + +  GTK+N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 86  NLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKINLEFVSANPTGPIHLGGTRWAAVGDS 145

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++ FSG EVTREYY ND G QI+  A S+    +          PE  Y G Y+K +
Sbjct: 146 LGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAAAKG------EPTPEDGYGGDYIKDI 199

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              +  +  + L    EE      + + V+ M   I+  L       D+F  E+     +
Sbjct: 200 AAAVVKEVPTALKGSDEEVQ-ETFRAHGVEMMFDHIKKSLAEFGTHFDVFFHENSLF--E 256

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   ++ L   G +YE                       +ST  GDD DR ++KSDG
Sbjct: 257 SGAVEKAVEKLKSSGELYEA----------------DGAWWLKSTDYGDDKDRVVIKSDG 300

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y A D+AY   K++RG D  IY++G+DH GY+ RL+A AAA+     ++ V++ ++V
Sbjct: 301 NAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYIARLKAAAAALGYDADRVEVMIGQMV 360

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG  +KMSKRAG  ITL  +V+ +G D+ R+ ++       LD D      QS +N
Sbjct: 361 NLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARYSLIRSSVDSTLDIDLDLWAAQSSDN 420

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           PV+YVQY +AR  S+ R+A+ I   + D D    +++  E E D     LI  L E+P V
Sbjct: 421 PVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLSLLTHEREGD-----LIRTLGEFPSV 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +A   +EP+++A Y   LA+ FH  +      P           + + R  L  A   
Sbjct: 476 VASAAELREPHRIARYAEQLAATFHRFYDTCHVLPGQ---DEEVEPIHVARFALAMATRQ 532

Query: 569 IINSGLNIIGVESPNEM 585
            + + L ++GV +P  M
Sbjct: 533 TLANALGLVGVTAPERM 549


>gi|302872432|ref|YP_003841068.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575291|gb|ADL43082.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 561

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 197/558 (35%), Positives = 312/558 (55%), Gaps = 36/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN A+ L++ L  +P  IA+ I+  I +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIALELTKKLRKNPREIAQHILNCIDLSETFIERVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K +  I+  G  YG+  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFKKEWLYKAVEVILSEGNNYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   + DLPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  D++  +L N   ++    + D++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + I++L  +GY YE  G L    SK  +                    D  L++++
Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFVASKIDKSLK-----------------DEVLIRAN 315

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G  TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +
Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQ 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LVRL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ 
Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR   I R   +    LD     ++ I  E      EL+L+  L E P 
Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSKIKVELLQQEEELELLKKLLELPE 490

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            IE A    +  ++  YL DLAS+FH  ++  R       V+  N +L   RL LV  V 
Sbjct: 491 EIEIAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543

Query: 568 SIINSGLNIIGVESPNEM 585
            +IN+ L ++GV++P +M
Sbjct: 544 IVINNMLRLLGVDAPEKM 561


>gi|325679007|ref|ZP_08158605.1| arginine--tRNA ligase [Ruminococcus albus 8]
 gi|324109511|gb|EGC03729.1| arginine--tRNA ligase [Ruminococcus albus 8]
          Length = 589

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/580 (32%), Positives = 298/580 (51%), Gaps = 57/580 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLY 92
           IE P D  +G +STNAAM+ ++P    P  IAE IV +I  +    + V IAG GFIN +
Sbjct: 39  IEIPADSKNGDVSTNAAMVCAKPFRNAPRKIAEAIVGKIVTEGSCFEKVEIAGPGFINFF 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            +  +   ++ +++ +G +YG+   GKG +  +EFVSANPTGPMH+G+ R   +GD LA+
Sbjct: 99  YNKGWYASVVKAVLDAGADYGKTEFGKGKRALVEFVSANPTGPMHIGNARGGAIGDCLAA 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------------------ALYN 191
           +M ++GYEV RE+YINDAG QI     S+  RY Q                      +Y 
Sbjct: 159 VMEYAGYEVEREFYINDAGNQIEKFGKSLRLRYMQICSEAGQAIVAKNLDLDAFCKEIYG 218

Query: 192 NDSD-----LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            D +     +P+  Y G+ +    K   D+Y       PEE     + DY++   ++ + 
Sbjct: 219 EDGNRPEFPMPDDVYLGMDIIAHAKNFFDEYGMIASAQPEEDCKKALVDYALPKNIQGLH 278

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           DDL    I++D +  E   H  +   +  +I+ L   GY YE                  
Sbjct: 279 DDLAKYRIEYDTWFRESTLH--NDGSVAKVIEQLKASGYTYE----------------QD 320

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
             L F++T  GD+ DR L++ +G  TYF  D+AY   K  ER FD  I + G+DH GY+ 
Sbjct: 321 GALWFKTTEFGDEKDRVLVRDNGIPTYFVPDIAYHYNKLAERKFDKAIDIFGADHHGYIP 380

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           RL+A   A+     ++++++ ++VRL ++G   K+SKR+G  ITL  +++E+  D+ RF 
Sbjct: 381 RLKAAMTALGVDAKKLDIVIMQMVRLVKNGETYKLSKRSGKAITLNTLLEEIPIDAARFF 440

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
              R+ +   DFD       S +NPV+YVQYA+AR  S+ ++ K+    ++   F   + 
Sbjct: 441 FNLREPNSQFDFDLDLAISNSSQNPVYYVQYAHARICSVIKKLKE--EGVEAKAFTDEM- 497

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             E+   + EL+L+  +A  P  I +A  A +P K+  Y  D+A+++H  ++  R     
Sbjct: 498 -AEALNTSEELELVKLMATLPTTINDAAKAYDPAKVTKYAVDIATLYHKFYNACR----- 551

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++     +   RL L  AV  II + L ++ +  P  M
Sbjct: 552 --IKGEPENVMQARLSLSLAVKQIIANILGMLKINCPESM 589


>gi|326382074|ref|ZP_08203767.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199500|gb|EGD56681.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 550

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/559 (33%), Positives = 293/559 (52%), Gaps = 37/559 (6%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I + +V+ERPR   HG  +TN A+ L +  G++P  +A  +      DP +DS  IAG G
Sbjct: 28  IPETVVVERPRSPEHGDYATNIALQLGKRAGVNPRELATWLADEFASDPGIDSAEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+NL L+ +   + ++S++  G +YGR        VN+EFVSANPTGP+H+G  R A VG
Sbjct: 88  FVNLRLAAAAQNQTVASVLDRGADYGRGDELSTLNVNLEFVSANPTGPIHLGGTRWAAVG 147

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L  ++A  G +VTREYY ND G QIN  A S+    +          PE  Y G Y+ 
Sbjct: 148 DALGRVLAARGAQVTREYYFNDHGEQINRFANSLMAAAKG------EPTPEDGYAGEYID 201

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FH 266
            +   +  K    +L+ P +      +   V+ M   I+  L       D++  E+  F 
Sbjct: 202 DIAGTVVAKVPG-ILDLPVDDAREAFRAEGVELMFAHIKRTLHEFGTDFDVYTHENSMFD 260

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           RG    + + I  L   G +YE                       RST  GDD DR ++K
Sbjct: 261 RG---LVDESIAELKANGNLYEA----------------DGAWWLRSTNYGDDKDRVVIK 301

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           SDG+  Y A D+AY K K++RG +++IY++G+DH GYV RL+A AAA+      + VL+ 
Sbjct: 302 SDGNAAYIAGDIAYLKDKHDRGANHLIYMLGADHHGYVVRLKAAAAALGYDADAVEVLIG 361

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++V L +DG P++MSKRAG  I L  +V+ VG D+ R+ ++       +D D   +++QS
Sbjct: 362 QMVNLVKDGQPVRMSKRAGTVIALDDLVEAVGVDAARYALIRSSIDVNIDIDLDLLRKQS 421

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +NPV+YVQYA+AR  ++ R A ++   L  +     ++  E+E D     LI  + ++ 
Sbjct: 422 ADNPVYYVQYAHARLSALARHAAELGLSLSTEHL--ELLDDEAEGD-----LIRTIGDFS 474

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+  A   +EP++++ YL  LA  +H  ++  R  P+          +   RL L  A 
Sbjct: 475 EVVATAATLREPHRVSRYLESLAGAYHRFYARCRVLPQ---GDEEPGDVHAARLALCAAT 531

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +GL ++GV +P  M
Sbjct: 532 RQVLANGLALVGVSAPERM 550


>gi|257784334|ref|YP_003179551.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472841|gb|ACV50960.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 614

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 193/625 (30%), Positives = 315/625 (50%), Gaps = 69/625 (11%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++  L E     ++ +  +D + +ERP+D ++G  S+  AM  ++     P  IA  +VA
Sbjct: 9   VRQALAEAQAAGELPEFQIDDVGLERPQDSSNGDWSSTVAMRSAKLAHKAPRDIAAALVA 68

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            I  D  ++ V +AG GF+N YLS +   +I +++   G ++GR+  G G KV +E+VSA
Sbjct: 69  HIVKDAQIERVEVAGPGFVNFYLSTAAGNEIFNTVRKQGADFGRSSFGSGQKVQVEYVSA 128

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL- 189
           NP GP+H+GH R A +GD+L+ ++AF+GYEV REYY+ND G+Q++    S+  RY Q + 
Sbjct: 129 NPVGPLHIGHGRWAALGDSLSRILAFAGYEVEREYYVNDHGSQMDVFGHSISKRYLQLID 188

Query: 190 ------------------------YNNDSDLPEGY--------------YPGVYLKHVGK 211
                                    + D   PE +              Y G Y+  +G 
Sbjct: 189 IMQKRGIDADTAAQVLAEDRNAYVADEDDAHPEEHPFTDEFINSLGGNAYAGDYIVDLGL 248

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                      N  E++ +   ++   + M++ I+          D++ SE   +  D  
Sbjct: 249 FFLKNDGELWANKSEDERMVEFRERGYKMMLESIKKTCHNARADFDVWFSERSLYVKDSQ 308

Query: 272 ---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +   +D L + GY+Y                 D   L FRST  GDD DR L+K++
Sbjct: 309 GKDAVDRALDALDKLGYLYRS---------------DEGALFFRSTDFGDDKDRVLIKTN 353

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G YTYFA+D+AY   K++R  D++I + G+DH GY++R+ + A A+     Q  VLL +L
Sbjct: 354 GEYTYFASDVAYHWNKFQR-VDHVIDIWGADHHGYIQRVRSAATALG-YPTQFEVLLGQL 411

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L R+G+ ++MSKR G  I    ++ EVG D+ R+ ++ + +++++DFD  +VK Q   
Sbjct: 412 VNLLRNGVAVRMSKRKGTGIHFDELLAEVGVDATRYTLVSKSSNQMIDFDIEQVKRQDSS 471

Query: 449 NPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEF----DTSELQLIV 500
           NPV+YVQYA+AR  SI R+A  I       L  D      I    +     D +E  L  
Sbjct: 472 NPVYYVQYAHARICSILRRAAGIDLEEAKTLGMDAVASKAIGSVVDLGLLSDAAEQALAR 531

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L E+P +IE+    + P+++  Y+ +LA  FH  ++  +  P     +  + +L+  RL
Sbjct: 532 KLFEFPGLIESCARDRAPFRITHYIEELAGQFHAFYTVCQVLPSEG--RPLDTELSKARL 589

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
               A   ++   LN+IGV +P  M
Sbjct: 590 AACDATRRVLAIALNLIGVSAPEVM 614


>gi|146296397|ref|YP_001180168.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409973|gb|ABP66977.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 562

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 192/557 (34%), Positives = 316/557 (56%), Gaps = 34/557 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           I+IE+P++ AHG  +TN AM L+R L  +P  IA+ IV  I + +  ++ V +AG GFIN
Sbjct: 37  IMIEKPKEKAHGDFATNIAMELTRKLKKNPREIAQNIVDNIDLTNTLIEKVEVAGPGFIN 96

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G  YGR  IG G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 97  FFFKKEWLYKVVDVILSEGDGYGRVDIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 156

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY+VT+E+Y+NDAG QI     S+  RY+Q L   + +LPE  Y G  +    
Sbjct: 157 ANLLKWAGYKVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGDDIIERV 215

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE  ++   +L   P E+    + +++++  + ++++ L+   I++D++  E   +  + 
Sbjct: 216 KEYLNENGDDLEGLPSEERRRKLVEFALKRNIALMKEHLQKYGIEYDVWFHESSLY--ES 273

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDG 329
             + + I++L R G+ YE                    + F ++ + +++ D  L++++G
Sbjct: 274 GEVYETIEDLKRHGFTYE----------------KDGAVWFAASKLDENLKDEVLIRTNG 317

Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
             TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ ++L +L
Sbjct: 318 IPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVPRMKAAMKALGIDPERLVIILMQL 377

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL R    ++MSKR G  ITL  +++E+G D+ RFM   +     ++ D   V +Q+ +
Sbjct: 378 VRLVRGKEIVRMSKRTGKAITLIDLIEEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLD 437

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR   I R   +     +  +  R+ I  E      EL+L+  L E P  
Sbjct: 438 NPVFYVQYAHARTCGILRALSE-----EGIVLNRDKIKLELLQQEEELELLKKLLELPEE 492

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           IE A    +  ++  YL DLAS+FH  ++  R       V+  + +L   RL LV  V  
Sbjct: 493 IEIAARNLDVSRVTKYLLDLASIFHAFYNACR-------VKNESEELMHTRLSLVECVRI 545

Query: 569 IINSGLNIIGVESPNEM 585
           +I + L ++GV++P +M
Sbjct: 546 VIKNVLTLLGVDAPEKM 562


>gi|125974436|ref|YP_001038346.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005211|ref|ZP_05430179.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418961|ref|ZP_06249979.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166232780|sp|A3DGS4|SYR_CLOTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|125714661|gb|ABN53153.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255990865|gb|EEU00979.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281407418|gb|EFB37678.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941572|gb|ADU75606.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 564

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/561 (32%), Positives = 305/561 (54%), Gaps = 34/561 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87
           +D + IE P++  HG  STN AM  ++ +   P  +AE+I+  + +    +D V  AG G
Sbjct: 34  VDELFIEIPKEKGHGDFSTNIAMQAAKTVRKAPRQVAEIIIKNMDLSNTYIDRVEAAGPG 93

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN +L+ ++L  +L  I      YG   IG+G KV +EFVSANPTGP+H+G+ R   +G
Sbjct: 94  FINFFLTNAWLYDVLKVIQKEKENYGNLDIGRGQKVMVEFVSANPTGPLHMGNARGGALG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYL 206
           D +AS++  +GY+VTRE+YINDAG QI    +S+  RY Q L   D+ + PE  Y G  +
Sbjct: 154 DCIASVLEKAGYDVTREFYINDAGNQIEKFGISLEARYIQLLKGEDAVEFPEDGYHGEDI 213

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
               K   ++    LL    E+    + +Y++   ++ IR  L+   +  D++ SE   +
Sbjct: 214 IDHMKAYIEENGDNLLYVDSEERRKTLVEYALPKNIERIRKSLENYGVVFDVWFSEQSLY 273

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             D   +R+ +D L  +GY +E                    + F+++ +G + D  +++
Sbjct: 274 --DNGEVRETLDILKEKGYTFE----------------KDGAVWFKASALGAEKDEVIVR 315

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           ++G  TYFAAD+AY + K+ +R FD +I ++G+DH G+  R++    A      ++++++
Sbjct: 316 NNGIPTYFAADIAYHRNKFLKRKFDRVINLLGADHHGHAARMKCALKAFDIDPDKLDIVI 375

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +LVRLYR+G   +MSKR G  I+L  +++EVG D+ RF    + +   LDFD     ++
Sbjct: 376 FQLVRLYRNGEIARMSKRTGRAISLDDLLEEVGRDAARFFFNTKASGSHLDFDLDLAVKK 435

Query: 446 SKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           S ENPV+YVQYAYAR  S+ R  + + F   D D     V+         E++L+  L+E
Sbjct: 436 SNENPVYYVQYAYARSCSMLRLLESEGFKVPDVDSVDLTVLKA-----PEEIELMKKLSE 490

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP  I  +    EP +L  Y+ D+AS FH  ++  R       V+     L   R+ LV 
Sbjct: 491 YPEEIRISAQTLEPSRLTRYVLDVASNFHSFYNACR-------VKGEEENLMYARMILVD 543

Query: 565 AVASIINSGLNIIGVESPNEM 585
           +   +I + L+++ + +P +M
Sbjct: 544 STRLVIKNVLDVLSITAPEKM 564


>gi|310829664|ref|YP_003962021.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741398|gb|ADO39058.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 563

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 198/564 (35%), Positives = 291/564 (51%), Gaps = 40/564 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87
           L  I +E PR+  HG  +TN AM L +     P  IAE IV  + ID   V++V IAG G
Sbjct: 33  LPEIYLEVPREKEHGDYATNIAMQLPKQAHKAPRVIAESIVRHMNIDSSYVEAVEIAGPG 92

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  L   ++ ++L  I      YG+     G K N+EF+SANPTGPMH+G+ R   +G
Sbjct: 93  FINFKLKSDWVYEVLLEIEAMQENYGKTQGNAGKKYNLEFISANPTGPMHMGNARGGAIG 152

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA++  ++GY+VTRE+Y+NDAG QI     S+  R++Q L   D   PE  Y G  ++
Sbjct: 153 DILAAIAEWTGYDVTREFYVNDAGNQIAKFGDSLDARFRQ-LMGEDIPFPEDGYQGNDIR 211

Query: 208 HVGKELADKYSS-----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
              +E  D+        + L   E +   I  DY+++  +K +  DL+   I +DI+ SE
Sbjct: 212 VHMEEFIDQEGGADACQKYLTMDEAERKGIFVDYALEKNLKKMHADLEKYGIHYDIWFSE 271

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  D   I   +  L   G VYE                    L F ++  G + D 
Sbjct: 272 QSLY--DQGAIESALKILQDSGAVYE----------------KEGALWFTTSEFGCEKDD 313

Query: 323 PLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            L++ +G  TYF  D+AY   K++ RGFD  I V G+DH G++ RL+A   A       +
Sbjct: 314 VLVRQNGLPTYFMGDIAYHLNKFKTRGFDRCINVWGADHHGHIARLKAAMQAAGVNPDHL 373

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +++ +LVRL RDG   +MSKR G+ ITL  +++EVG D+ RF+   R     LDFD   
Sbjct: 374 EIVIMQLVRLMRDGEIARMSKRKGEMITLTDLIEEVGRDAARFLFNMRSPDSHLDFDLDL 433

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
             EQS ENPVFYVQYA+AR  SI RQ  +   D + +      + +E E    EL L+  
Sbjct: 434 AIEQSNENPVFYVQYAHARICSILRQMAE---DKNTEGPANLTLLREKE----ELTLLDM 486

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L+  P  I  A    +P ++  Y  DLA+ FH  ++  R       V+  + +L   RL 
Sbjct: 487 LSNLPNEIIVAEEKMDPSRITHYAMDLAAAFHSFYNACR-------VRVEDIELMKARLA 539

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+     ++ + L I+G+++P  M
Sbjct: 540 LIKGTKQVLANVLEILGIDAPERM 563


>gi|312135721|ref|YP_004003059.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775772|gb|ADQ05259.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 561

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/556 (34%), Positives = 309/556 (55%), Gaps = 32/556 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I+IE+P++ +HG  +TN AM L+R    +P  IA+ I+  I +    ++ V +AG GFIN
Sbjct: 36  IMIEKPKEKSHGDFATNIAMELTRKFKKNPREIAQNILDCIDLSGTFIEKVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L K++  I+  G  YG+  +G G KV +EFVSANPTGPMH+G+ R   +GD L
Sbjct: 96  FFFRNDWLYKVVEVILSEGNNYGKVNVGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+ ++GY VT+E+Y+NDAG QI     S+  RY+Q L   + +LPE  Y G  +    
Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERV 214

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +E  ++Y  +L N   ++    + +++++  + ++++ LK   I++D++  E   +  + 
Sbjct: 215 REYLNEYGDDLENLSSDERRKKLVEFALKRNISLMKEHLKKYGIEYDVWFHESSLY--ES 272

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + + I++L  +GY YE                D       S + G+  D  L++++G 
Sbjct: 273 GEVFETIEDLKSRGYTYE---------------KDGALWFAASKIDGNLKDEVLIRANGI 317

Query: 331 YTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A   A+     ++ V+L +LV
Sbjct: 318 PTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQLV 377

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RL R    ++MSKR G  ITL  ++DE+G D+ RFM   +     ++ D   V +Q+ +N
Sbjct: 378 RLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDN 437

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PVFYVQYA+AR   I R   +    LD      N++ Q       E +L+  L E P  I
Sbjct: 438 PVFYVQYAHARTCGIIRALSEEGIVLDRGRIKLNLLQQ-----EEEFELLKKLLELPEEI 492

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A    +  ++  YL DL+++FH  ++  +       V+  N  L   RL LV  V  +
Sbjct: 493 EIAARNFDVSRVTKYLLDLSAIFHSFYNACK-------VKNENEDLMFTRLALVECVRIV 545

Query: 570 INSGLNIIGVESPNEM 585
           I + L+++GVE+P  M
Sbjct: 546 IKNMLDLLGVEAPERM 561


>gi|237785875|ref|YP_002906580.1| arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758787|gb|ACR18037.1| Arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 594

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 184/558 (32%), Positives = 283/558 (50%), Gaps = 39/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  +TN A+ +++ +G  P  +A  +   +  +  +++V +AG GF+N+
Sbjct: 72  VTVERPRNPEHGDYATNLALQIAKKVGTSPRELAGWLAEDLATNSAIETVDVAGPGFLNI 131

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+ +   +I+  I+  G  +G +       +N+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 132 RLAAAAQGEIVGRILAEGERFGSSSELSDEVINLEFVSANPTGPIHLGGTRWAAVGDALG 191

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            + AF G  +TREYY ND G QI+  A S+      AL       PE  Y G Y++ +  
Sbjct: 192 RIFAFRGASITREYYFNDHGRQIDRFARSLV---AAAL---GQPTPEDGYGGEYIQDIAS 245

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + DK+  E    P E+   + +   V  M   I+  L       D+F  E+     +  
Sbjct: 246 SVVDKHP-EATQLPLEERQELFRKEGVDLMFAHIKRTLHEFGTDFDVFFHENSLF--ESG 302

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   I  L   G +YE                       RST  GDD DR ++KSDG  
Sbjct: 303 AVDQAIQKLKDNGNLYEA----------------DGAWWLRSTSFGDDKDRVVIKSDGDA 346

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A D+AY + K ERG +  IY++G+DH GY+ RL+A A A+     Q+ VL+ ++V L
Sbjct: 347 AYIAGDIAYIRDKIERGHNLCIYMLGADHHGYIARLKAAAQALGYDPTQVEVLIGQMVNL 406

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG  +KMSKRAG  ITL  +V+ +G D+ R+ ++     + LD D      Q+ +NPV
Sbjct: 407 VRDGKAVKMSKRAGTVITLDDLVELIGVDAARYALIRSSVDQTLDIDMDLWARQTNDNPV 466

Query: 452 FYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           FYVQYA+AR  S+ R+A+    +  D D+ L            +  E  LI  L E+P V
Sbjct: 467 FYVQYAHARLCSLGRKAQAAGILVKDPDYSLL----------VNDYEGALIRTLGEFPSV 516

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK-LTMMRLQLVHAVA 567
           +  A   +EP+++A Y+ +LA  FH  +   +  P+      +    +   RL L  A  
Sbjct: 517 VGTAAELREPHRIARYMEELAGTFHRFYDSCQILPKKSEPTGDEAAPIVHARLALAQATR 576

Query: 568 SIINSGLNIIGVESPNEM 585
             I + L+++GV +P  M
Sbjct: 577 QTIANALSLLGVSAPERM 594


>gi|300858249|ref|YP_003783232.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685703|gb|ADK28625.1| Arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302205970|gb|ADL10312.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302330523|gb|ADL20717.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276205|gb|ADO26104.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 550

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 193/585 (32%), Positives = 303/585 (51%), Gaps = 42/585 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  +K     I     ++  +L + +V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   ADLSHLIKRTATTILESRGLDASVLPETVVVERPRNPEHGDYATNVALQVAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + +L+V  + +D  V    IAG GFIN+ L+ +   +I++ I+ +G  +G + +  G++V
Sbjct: 64  LGQLLVDALALDEAVAEAGIAGPGFINIRLAAAAQGEIVAKILAAGEAFGHSDLYAGSRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFTNSLV- 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               A    D   PE  Y G Y+  + + +   +   L   P E  L   +   V+ M  
Sbjct: 183 ----AAAKGDP-TPEDGYGGDYINDIAEAVVASHPDVLTQEPTE-MLETFRSVGVEMMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D+F  E+     +   +   I+ L   G +Y                
Sbjct: 237 HIKESLHEFGTDFDVFFHENSLF--ESGAVDKAIERLKENGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +S+  GDD DR ++KSDG   Y A D+AY   K+ERG +  IY++G+DH GY
Sbjct: 279 FQDGAWWLKSSDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFERGHNLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+  +   + VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D  R
Sbjct: 339 ISRLRAAAAALGYEPNSVEVLIGQMVNLVRDGQAVRMSKRAGTVITLDDLVEAIGIDGAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480
           + M+       LD D    + QS +NPV+YVQY +AR  SI R+A D+     D +F L 
Sbjct: 399 YSMIRSSVDSSLDIDLALWQSQSSDNPVYYVQYGHARLCSIARKAGDLGITAIDPNFALL 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +           E  LI  L E+P V++ A   +EP+++A Y  +LA  FH  +   +
Sbjct: 459 THD----------REGDLIRTLGEFPAVVKAAAELREPHRVARYAEELAGTFHRFYDSCQ 508

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P+      + + +   RL L +A   ++ + L ++GV +P  M
Sbjct: 509 ILPK---AGESPQSVHTARLALANATRQVLANALGLVGVTAPERM 550


>gi|320354044|ref|YP_004195383.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122546|gb|ADW18092.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 549

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 191/555 (34%), Positives = 293/555 (52%), Gaps = 35/555 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R  +E P+    G  STN A++ +      P  +A      +     ++ V +AG GFIN
Sbjct: 30  RYTVEVPKREGQGDFSTNFALVAAGIDKRKPRDLAAQFAELLGGQSMIERVEVAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L+L       +L+ I      +GR+  G   +V +EFVSANPTGP+ VGH R AV+GDT+
Sbjct: 90  LFLDKKIWVTVLAPIYEQDAHFGRSTNGADRRVLVEFVSANPTGPLSVGHGRNAVLGDTI 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A L+  SGY V REYY NDAG Q+  L  S   RY + L   ++  PE  Y G Y+  + 
Sbjct: 150 ARLLTASGYAVQREYYFNDAGRQMRVLGESTRARYLELLGLANT-FPEDGYQGDYIYDIA 208

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + D+         ++  L + K+ + +A+   I   LK + I  D + +E   +  + 
Sbjct: 209 RAMIDEAGDGF----KDAELAVFKERAQRAIFADIDATLKRIGIGFDTYFNEHTLY--ED 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  +++ L  +  VYE      K   T           F++T  G + DR ++KS G 
Sbjct: 263 GRVNQVVEELRAKNLVYE------KEGAT----------WFKTTEFGQEQDRVIIKSSGE 306

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY   D+AY   K++RG+D MI V GSDH   V  + A   A+    ++I V+L + V 
Sbjct: 307 PTYRLPDIAYHCDKFKRGYDWMINVFGSDHIATVPDVLAGVRALGHDDSRITVVLYQFVT 366

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG  +KMS R   F+T+  +VDEVG D++RF  L RK   L++FD    K+QS+ENP
Sbjct: 367 LLRDGKQVKMSTRKATFVTVDELVDEVGPDALRFFFLMRKPDNLIEFDLDLAKKQSQENP 426

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  SI RQA++   ++     P  ++ + +E    E  L+  LAEYP+++ 
Sbjct: 427 VYYVQYAHARLCSIERQAREQGVNVG---TPDQILARLAE--PEEYGLLKTLAEYPQLVA 481

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P+++ FYL DLA  FHG ++  +       V  ++ +L+  RL L  A+  + 
Sbjct: 482 GAAADLAPHRVVFYLMDLAGQFHGFYNKHK-------VLGDDPELSRARLYLCGALKRVF 534

Query: 571 NSGLNIIGVESPNEM 585
            +GL +IG+ +P  M
Sbjct: 535 RNGLTLIGLRAPETM 549


>gi|88855307|ref|ZP_01129971.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815214|gb|EAR25072.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 553

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 184/562 (32%), Positives = 303/562 (53%), Gaps = 49/562 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V+ERPR+  HG  ++N AM L++ LG  P  +A  I  +++    + +V +AG GFIN+
Sbjct: 33  LVLERPRNRDHGDWASNVAMKLAKTLGASPRELATEIAEQVRTIDGIAAVDVAGPGFINI 92

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L  +    +  +IV  G  YG N    G  +N+EFVSANPTGP+H+GH R A +GD+LA
Sbjct: 93  TLDAAAAGALAKTIVEQGDAYGSNDSLAGQTINLEFVSANPTGPLHIGHTRWAALGDSLA 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++  +G E+  E+YINDAG Q++    S+    Q          PE  YPG Y+  + K
Sbjct: 153 RILKTAGAELVSEFYINDAGNQMDNFGASILASAQG------EPTPENGYPGAYIAELAK 206

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD-- 269
           E+   +  ELL+   +  + + ++   +  +  I+  L   N+  D++ SE   H  +  
Sbjct: 207 EVLVSH-PELLDLEHDAAIAVARERGYELQLGAIKKSLADFNVHFDVWFSERSLHVANGE 265

Query: 270 -PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-VGDDVDRPLLKS 327
             S I + ++ L  QG+V                 +DR   ++ +T   GDD DR + + 
Sbjct: 266 GASAIDEAVERLRAQGHV-----------------VDRDDAVWVTTTDFGDDKDRVIKRG 308

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLC 386
           +G YTYFA+D AY+  K +RGF + IY++G+DH GYV RL+A+A A  +     I V++ 
Sbjct: 309 NGVYTYFASDAAYYLSKGDRGFAHKIYLLGADHHGYVHRLKALAGAAGDDPNKDIEVMIG 368

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +LV +       ++SKRAG+ I L  + + +G+D++R+ +        L  D   +K+++
Sbjct: 369 QLVSIN----GARLSKRAGNIIELDDLREWLGTDALRYSLGRYPADSPLTLDPEILKKRT 424

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +NPVFYVQYA+AR  S+ R A +    +D  +F  +++  E+E       L+  LAE+P
Sbjct: 425 NDNPVFYVQYAHARTHSVARNAGE--SGVDRSVFDASLLTNETES-----ILLGVLAEFP 477

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLV 563
           R++  A   +EP+++A Y  +LA  +H  +   R  P       N+ + T     RL + 
Sbjct: 478 RIVAQAAELREPHRVARYAEELAGSYHRWYDQCRVTP------MNDEEATDVHRTRLWVN 531

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++ +GL ++GV +P  M
Sbjct: 532 DAVGQVLRNGLWMLGVSAPERM 553


>gi|229815551|ref|ZP_04445878.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM
           13280]
 gi|229808781|gb|EEP44556.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM
           13280]
          Length = 622

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 196/614 (31%), Positives = 314/614 (51%), Gaps = 80/614 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L+   +ERP D +HG  ++  AM  ++     P  IA+ IVA +    ++  V +AG GF
Sbjct: 32  LEDCGMERPADTSHGEWTSTCAMKSAKLAHCAPKKIADAIVAHMPESAEIAKVEVAGPGF 91

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN YL+ +    IL      G+++ ++ IG+G K  +EFVSANP GPMHVGH R A +GD
Sbjct: 92  INFYLNAAANNAILDVARKEGMDFAKSNIGQGLKTQVEFVSANPVGPMHVGHGRWAALGD 151

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------------------- 189
           +L  +M+ +GY++ RE+YIND G+Q++    S+ +RY Q +                   
Sbjct: 152 SLCRVMSHAGYDIQREFYINDHGSQMDVFGNSISYRYMQLIEIMEKEGLDIDGARDFLAQ 211

Query: 190 -----YNNDSD-----------LPEGY----YPGVYLKHVG----KELADKYS-----SE 220
                  +++D             EG     Y G Y+        K+  DK++       
Sbjct: 212 DRDNFVQDEADEHLDSHPYMDAFTEGLGGNAYGGTYIIDEAAAFYKKDGDKWAHVTDEER 271

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           +L F EE +  +V++  ++ +   +R D      +  ++I + +      S +      L
Sbjct: 272 MLYFREEGYAKMVEN--MRQLCHDVRCDFDKWFSERTVYIKDTEGEHAGTSAVDRAFAKL 329

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              GY+Y                     L FRST +GDD DR L+K++G YTYFA+D+AY
Sbjct: 330 DEMGYLYN----------------KDGALWFRSTDLGDDKDRVLVKANGEYTYFASDVAY 373

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              K++R  D++I + G DH GY+ R+  V  A+     Q  VLL + V L R+G PI+M
Sbjct: 374 HWDKFQR-VDHVIDIWGCDHHGYINRVRCVCDALG-YPGQFEVLLGQFVNLLRNGKPIRM 431

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SKR G  +T + +VDEVG+D+ R+ ++ R +++ +DFD   VKE+S+ NPV+YVQYA+AR
Sbjct: 432 SKRKGTMVTFQELVDEVGADATRYTLISRSSNQAIDFDIEAVKEKSQNNPVYYVQYAHAR 491

Query: 461 CRSIFRQAKDIFP----DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENA 512
             SI R+A  + P    ++  D      I +  ++    D +EL L   ++E   +I + 
Sbjct: 492 ICSILRKAAGVTPEEAAEMGMDAVAAKAIGENVDYALLTDPTELALSRKISELEDLIASC 551

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIIN 571
              + P++L  +  +LA+ FH  +   +  P   R V A   +L+  RL    AV S++ 
Sbjct: 552 ARDRAPFRLTHFAEELAAGFHSFYQACQVLPSEGRPVDA---ELSRARLAACDAVRSVLE 608

Query: 572 SGLNIIGVESPNEM 585
             L++IGV +P  M
Sbjct: 609 LVLSLIGVSAPTTM 622


>gi|332531547|ref|ZP_08407444.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332038910|gb|EGI75339.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 561

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 198/575 (34%), Positives = 301/575 (52%), Gaps = 59/575 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE----LIVARIKIDPDVDSVFIAGK 86
           R   E P+   HG L+T AAM +++PL   P  +AE     ++A       VD+V IAG 
Sbjct: 26  RAAFESPKLAEHGDLATTAAMQIAKPLKQPPRQVAEDLRRALLAMPAFSIWVDAVEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ L P+  ++I+  ++ +G  YGR    KG ++ +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFINIRLKPAAKQEIVREVLGAGERYGRQ-TPKGQRMMVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +++L A  G+EV RE+Y NDAG QI TLA+SV  R  + L   D+  PE  Y G Y+
Sbjct: 145 GDAISNLYATQGWEVYREFYYNDAGVQIQTLAVSVQAR-ARGLKPGDAGWPESAYNGDYI 203

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRD-DLKALNIQHDI 258
             +    AD  + + +   +  +    K   +  M       ++  +D DL+A N++ D 
Sbjct: 204 ADIA---ADFMAGKTVQADDRSYTASGKVDDLDGMRLFAVAYLRHEQDLDLQAFNLRFDN 260

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      +   ++ L   G  YE                    L  RST  GD
Sbjct: 261 YYLESSLYTS--GRVDAAVEKLRAAGKTYE----------------QDGALWLRSTDYGD 302

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSE 376
           D DR + K DG+YTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   AA V  
Sbjct: 303 DKDRVMRKGDGTYTYFVPDVAYHISKWERGFQKVVNIQGTDHHGTIARVRAGLQAAGVGI 362

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            +   + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK      
Sbjct: 363 PQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEYT 422

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIF-----RQAKDIFPDLDFDLFPRNVIPQESEF 491
           FD     +++ +NPV+YVQYA+AR  S+      +   D     D DL         +  
Sbjct: 423 FDVDLAVQKNNDNPVYYVQYAHARICSVLAAWREKDGGDPVTLRDADL---------TAL 473

Query: 492 DTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
           DTS    L++ LA+YP ++  A     P+ +AFYL DLAS +H ++   R       +  
Sbjct: 474 DTSAAHTLMLKLAQYPDMLTGAARDFAPHDVAFYLRDLASSYHSYYDAER-------ILV 526

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +   RL LV A A ++ +GL ++GV +P +M
Sbjct: 527 DDEAVKRARLALVAATAQVLRNGLAVLGVSAPEKM 561


>gi|303233374|ref|ZP_07320043.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480503|gb|EFL43594.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 615

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 197/607 (32%), Positives = 306/607 (50%), Gaps = 78/607 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP D +HG  S+  AM  +R   + P  IA+ IV  +    ++  V IAG GFIN YL
Sbjct: 32  LERPADTSHGDWSSTIAMRSARLAHMAPAKIAQAIVDHMPETTEIAKVEIAGPGFINFYL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S S    +++++  +   +G   +GKG K+N EF+SANPTGP+HVGH R A +GD++ ++
Sbjct: 92  STSASNDVINAVRSARDRWGACNMGKGFKINYEFISANPTGPLHVGHGRWAALGDSVCNV 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRY--------------QQALY--------- 190
           + F GY+V REYYIND G+Q++    SV  RY              +QAL          
Sbjct: 152 LDFCGYDVFREYYINDHGSQMDVFGSSVSMRYAQLCSIIADKHLSAKQALELLLADRNAY 211

Query: 191 --NNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             + + + PE +              Y G Y+  +  E   +         E++     +
Sbjct: 212 VDDEEDEHPENHPYMDAFNEHLGGNSYGGDYIIEIAYEFYVQDGDSWAQVSEDERNAAFR 271

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR---QGYVYEGIL 291
           + + QAM+K I++         D++ SE   ++ D S    +    AR    GY+Y+   
Sbjct: 272 ERAYQAMLKRIQNTCHTSRCDFDLWFSERSLYQKDESGTSKVDRAFARLEKMGYLYK--- 328

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                        D   L F+ST  GDD DR L+KS+G YTYFA+D+AY   K++RG   
Sbjct: 329 ------------TDDGALWFKSTEFGDDKDRVLIKSNGEYTYFASDVAYHWDKFDRGAQQ 376

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            I + G+DH GY+ R+  V  A+  K   I V L + V L R+G P++MSKR G  IT  
Sbjct: 377 SIDLWGADHHGYIARVTNVCDALGFKGKFI-VDLGQFVNLLRNGEPVRMSKRKGTMITFE 435

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ EVG D+ R+ ++ + +++ +DFD   VKE+S  NPVFYVQYA+AR  SI R A  +
Sbjct: 436 ELLHEVGVDATRYTLISKSSNQTIDFDIEAVKEKSNSNPVFYVQYAHARICSILRNAAGV 495

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLA 522
             +    L    V  +    D  +L L+VH         L+E+P ++ +    + P+++ 
Sbjct: 496 TEEEAKTLGMDEVAARAVGNDV-DLSLLVHPMEAALSRKLSEFPELVASCARDRAPFRIT 554

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINSGLNIIG 578
            ++ +LA  FHG +++       + + +  R     L+  RL    AV   +   L +IG
Sbjct: 555 HFVEELAGAFHGFYAN------CQVLSSEGRPVDEALSHARLAACDAVRINLEVALKLIG 608

Query: 579 VESPNEM 585
           V +P  M
Sbjct: 609 VSAPEVM 615


>gi|221194653|ref|ZP_03567710.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185557|gb|EEE17947.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 613

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 187/602 (31%), Positives = 304/602 (50%), Gaps = 70/602 (11%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP D ++G  ++  AM  +R     P  IA  +VA +   P+++ V IAG GF+N YL
Sbjct: 32  LERPADASNGDWTSTVAMRSARLAHKSPRDIAAALVAHMSDVPEIERVEIAGPGFVNFYL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S +   +I  +I   G ++G++  GKGTK+ +E++SANP GP+HVGH R A +GD+L  +
Sbjct: 92  STAAGNEIFRTIREQGADFGKSDFGKGTKIQVEYISANPVGPLHVGHGRWAALGDSLCRV 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA------------------------- 188
              +GY+V REYYIND G+Q++    S+  RY Q                          
Sbjct: 152 FEHAGYDVEREYYINDHGSQMDVFGSSISKRYLQLNEIMAQKNVELQEAYQMLLDDREAF 211

Query: 189 LYNNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           + + D   PE +              Y G Y+  + K   ++     ++  E+  +   +
Sbjct: 212 IEDEDDSRPETHPYMDAFNESLGGNAYGGDYIIDLAKRFCEENGDAWVSASEDDRMADFR 271

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291
           +   + M++ I+          D++ SE   +  D    S +   ++ L   GY+Y    
Sbjct: 272 ERGYKLMLESIKATCHNARSDFDVWFSERSLYVPDENGKSAVDRALETLDGMGYLYH--- 328

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                        +   L FRST  GDD DR L+KS+G YTYFA+D+AY   K++R  D+
Sbjct: 329 -------------EDGALFFRSTKFGDDKDRVLIKSNGEYTYFASDVAYHWNKFQR-VDH 374

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I + G+DH GY++R+++V  A+     Q  VLL + V L R+G P+KMSKR G  I   
Sbjct: 375 VIDIWGADHHGYIQRVDSVCTALG-FPGQFEVLLGQFVNLLRNGTPVKMSKRKGTGIPFD 433

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ EV  D+ R+ ++ + +++++DFD  +VK Q   NPV+YVQYA+AR  SI R+   +
Sbjct: 434 ELLGEVSVDATRYTLMSKSSNQMIDFDIEQVKRQDSSNPVYYVQYAHARICSILRRGAGV 493

Query: 472 ----FPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                 +L  D      I    +     +  E  L   L+E+P ++EN    + P+++  
Sbjct: 494 SIEEAQELGMDEVASRAIGDSYDLSLLSENVEQALSRKLSEFPTLVENCARDRAPFRITH 553

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ +LAS FHG ++  +  P     +  +  L+  RL    A   ++   LN+IGV +P 
Sbjct: 554 YVEELASDFHGFYTVCQVLPSES--RPLDEDLSRARLAACDATRRVLALALNLIGVSAPQ 611

Query: 584 EM 585
            M
Sbjct: 612 SM 613


>gi|300789616|ref|YP_003769907.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299799130|gb|ADJ49505.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 553

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 189/560 (33%), Positives = 285/560 (50%), Gaps = 40/560 (7%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ IERPR+  HG  +TN A+ +++  GL P   AE + A +  D  V S  +AG GF+
Sbjct: 30  EQVTIERPRNPDHGDYATNLALQVAKKAGLKPRDFAEALAAAVSADDGVASAEVAGPGFL 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L+ +    I+  ++ +G  YGR     GT++N+EFVSANPTGP+H+G  R A VGD 
Sbjct: 90  NFRLAAAAQGDIVRQVLDAGAAYGRGDALAGTRINLEFVSANPTGPIHLGGTRWAAVGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  ++A  G +VTREYY NDAGAQI+    S+    +          PE  Y G Y+  +
Sbjct: 150 LGRVLAAQGADVTREYYFNDAGAQIDRFVRSLIAAAKG------EPAPEDGYAGGYINDI 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E+  K     L+ PE +     +   +  M   I+  L       D++  E+  H  +
Sbjct: 204 AAEVI-KAEPSALSLPEAERHETFRRIGINLMFSEIKQSLHDFGTDFDVYFHENSLH--E 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +   +  L   G +Y                 D      +S+  GDD DR ++K DG
Sbjct: 261 SGAVDAAVQQLKDSGNLY----------------FDEGAWWLKSSEYGDDKDRVVIKQDG 304

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y A DLAYFK K  RGFD  IY++G+DH GY  RL+A AAA  +  A + VL+ ++V
Sbjct: 305 NPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGYTARLKAAAAAFGDDPATVEVLIGQMV 364

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L  DG P++MSKRAG  IT+  +V+ VG D  R+ ++       LD D   +++ S +N
Sbjct: 365 NLVSDGKPVRMSKRAGTVITMEDLVEAVGVDPARYELIRYSVDSTLDVDLDLLRKHSNDN 424

Query: 450 PVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           PV+YVQYA+AR  ++ R A D+      D+D        +P E +       LI  + E+
Sbjct: 425 PVYYVQYAHARLCTMLRGAADLGLKSTEDVDLGQL---TLPVEGD-------LIRTIGEF 474

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  +  A   +EP+++A YL +LA   H  ++  RE   L             R+ L  A
Sbjct: 475 PETVRRAAEMREPHRIARYLEELAGALHKFYAV-REARVLPKGDEAATPANHARVALCEA 533

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P  M
Sbjct: 534 ARVVLANGLALVGVSAPERM 553


>gi|262371365|ref|ZP_06064683.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313702|gb|EEY94751.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 601

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 188/603 (31%), Positives = 309/603 (51%), Gaps = 82/603 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            + R +D +HG  ++N AMI S+  G+ P  +AE I+A +    D+    IAG GFIN +
Sbjct: 31  TLTRTKDRSHGDFASNIAMIASKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFF 90

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+      +L  I   G ++GR       K+ +EFVSANPT  +HVGH R A  G T+A+
Sbjct: 91  LNADQRFAVLDQIQAQGNQFGRTQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVAT 150

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +G  V REYY+NDAG Q++ LA S + RY + L       P+  Y G Y+K + + 
Sbjct: 151 LLEATGATVDREYYVNDAGRQMDILATSTYLRYLE-LTGQALVFPKNAYQGDYVKEIAQS 209

Query: 213 LAD---------------------KYSSEL--------LNFPEEKWLP------------ 231
           + D                     +Y+ EL        L+  +EK +             
Sbjct: 210 IIDADGYAYVRPVADVYKDVPEDVQYAEELDAEGNKVVLSGDKEKHIDGLIHNSQSLIGE 269

Query: 232 ---IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
              +    ++ A++  I+DDL    +  + + SE          I + ++ L ++G++YE
Sbjct: 270 AYRVFHQAALNAILDDIKDDLGEFGVTFNQWFSEASL----TDKIDEALETLEQRGFLYE 325

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                               + F+ST  GD+ DR + + +G  TYFA+D+AY   K +RG
Sbjct: 326 ----------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRG 369

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           + ++I + GSDH GY+ R++A   A+     ++ VLL + V L+R G  ++MS R+G F+
Sbjct: 370 YTDIIDIWGSDHHGYISRVKAAIDALGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFV 429

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR +  EVG+D+ RF  + RK+ + +DFD      QSK+N V+Y+QYA+AR   +    
Sbjct: 430 TLRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNRMV--- 486

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLA 522
            D+        F R+ +   +++D +      E +++  LA YP ++  A  + EP+++ 
Sbjct: 487 -DVKAPEKGISFDRSKV---ADYDATLLVLDAETEILAKLAAYPEIVLRAANSYEPHQVG 542

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL +LA++FHG W +  +N R+  +   N  L+  RL L   V  ++ +GL ++GV +P
Sbjct: 543 NYLKELAALFHG-W-YNLDNTRI--IDEQNIALSQARLLLSINVQQVLRNGLELLGVSAP 598

Query: 583 NEM 585
             M
Sbjct: 599 EAM 601


>gi|222056007|ref|YP_002538369.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782965|sp|B9M2S2|SYR_GEOSF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221565296|gb|ACM21268.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 561

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 196/570 (34%), Positives = 301/570 (52%), Gaps = 54/570 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90
           I+IE+P    HG  +TN AM+L++     P  +AE +V+ +     V + + IAG GFIN
Sbjct: 30  IIIEKPAHADHGDFATNVAMLLAKAEKKAPRMVAETLVSHLADGSGVCEKIEIAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L     R+ L  +   G EYG++ +G G K+ +EFVSANPTGP+H+GH R A +GDT+
Sbjct: 90  FHLKDEAWRQTLLEVDQIGFEYGKSGVGGGKKIQVEFVSANPTGPLHIGHGRGAALGDTI 149

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLK 207
             L++ +G++VTRE+Y NDAG QI  LALSV    Q   + N   D   P   Y G Y+ 
Sbjct: 150 CRLLSATGWDVTREFYYNDAGQQIANLALSV----QARCFGNGPDDPGWPSDGYQGEYII 205

Query: 208 HVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            V +         AD         P++  L  ++ ++V  + +    DL A ++  D++ 
Sbjct: 206 DVARAYMARETVHADDQHVTAAGDPQD--LEAIRRFAVAFLRREQDQDLAAFDVHFDVYS 263

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E D +  D S +  ++  L   G+ YE                    L  R+T   DD 
Sbjct: 264 LESDLY-ADGS-VERVVRRLVDSGHTYE----------------QDDALWLRTTSFADDK 305

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--K 378
           DR + KS G YTYF  D+AY   K+ERGF  ++   G+DH   + R+ A   A+      
Sbjct: 306 DRVMRKSGGGYTYFVPDVAYHLRKWERGFTRVVNEQGADHHSTITRVRAGLQALDAGIPA 365

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
                +L ++V + R G  +K+SKRAG ++TLR ++DEVG D+ RF  + RK    L FD
Sbjct: 366 GWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFVMRKPDSQLVFD 425

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSE 495
               K++S +NPV+YVQYA+AR  SIF  A +   + P  D     + + P+       E
Sbjct: 426 IDLAKQKSLDNPVYYVQYAHARICSIFENAAEKGFVVPGADGVNLDQLIEPE-------E 478

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + ++  LA +P V+E +    EP+++A YL +LA +FHG ++  R       V   + +L
Sbjct: 479 MAIVKALAFFPEVVEGSAANFEPHRIANYLQELAGLFHGFYNKNR-------VITEDSQL 531

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           T  RL L+  VA  + + LN++G+ +P +M
Sbjct: 532 TAARLFLLKCVALTLKNALNLLGISAPEKM 561


>gi|210632829|ref|ZP_03297562.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279]
 gi|210159388|gb|EEA90359.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279]
          Length = 619

 Score =  303 bits (776), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 199/619 (32%), Positives = 312/619 (50%), Gaps = 93/619 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L+   +ERP D +HG  ++  AM  ++     P  IA+ +VA +    +++ V +AG GF
Sbjct: 32  LEDCGMERPADTSHGEWTSTMAMKSAKLAHCAPRKIADAVVAHMPESAEIEHVEVAGPGF 91

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN YL+ +    I       G ++ ++ +G G K  IEFVSANP GPMHVGH R A +GD
Sbjct: 92  INFYLNAAANNAIFGVAREQGRDFAKSNVGGGVKTQIEFVSANPVGPMHVGHGRWAALGD 151

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------------------- 189
           ++ ++M  +GYEV RE++IND G Q+NT   S+  RY Q                     
Sbjct: 152 SMCNVMQHAGYEVEREFWINDYGNQMNTFGNSISKRYMQLADIMAKQGCDIDAARDFLAQ 211

Query: 190 ----YNND----------------SDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEK 228
               Y  D                +DL +  Y G Y+             + ++  P+E+
Sbjct: 212 DRDNYVQDEADEHLDSHPYMDEFTADLGKDSYGGTYIIDEAAAFWKSDGDKWVDADPQER 271

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGY 285
            L   ++   Q M+K ++D    +    D+++SE   ++ D    SP+    D L + GY
Sbjct: 272 MLSF-RERGYQKMLKDMKDTCHDVRCDFDVWMSERTMYQKDWTGTSPVERAYDKLDKMGY 330

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +Y          TT+        L F+ST  GDD DR + KS+G YTYF++D+AY   K+
Sbjct: 331 LY----------TTED-----GALWFKSTAFGDDKDRVIKKSNGDYTYFSSDIAYHWNKF 375

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +R  D ++ + G+DH GY+ R++AV  A+     Q  V L + V L R G P++MSKR G
Sbjct: 376 QR-VDLVLDIWGADHHGYIPRVKAVCDALG-YPGQFEVPLGQFVNLLRSGKPVRMSKRKG 433

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
             IT R ++DEVG+D+ R+ ++ R +++ +DFD   VKE+S+ NPV+YVQYA+AR  SI 
Sbjct: 434 TMITFRELIDEVGADAARYTLVSRSSNQTIDFDIDAVKEKSQSNPVYYVQYAHARICSIL 493

Query: 466 RQA------------------KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           R+A                  K I  ++D+ L            D +EL L   ++E   
Sbjct: 494 RKAAGVTFEQAELMGMENVAVKAIGANVDYSLLT----------DPTELALARKISELED 543

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAV 566
           +I      + P++L  Y  +LA+ FH  +   +  P   R V+    ++T  RL    AV
Sbjct: 544 LIAGCARDRAPFRLTHYAEELAAGFHSFYQACQVLPSEGRPVEP---EVTRARLAACDAV 600

Query: 567 ASIINSGLNIIGVESPNEM 585
            S+++  L++IGV +P +M
Sbjct: 601 RSVLDLVLSLIGVSAPTKM 619


>gi|315655913|ref|ZP_07908811.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315489977|gb|EFU79604.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 559

 Score =  302 bits (774), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 180/566 (31%), Positives = 299/566 (52%), Gaps = 44/566 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           +++++ +ERP++  HG  +TN A+ L + +G +P  +AE+  + I     V S  +AG G
Sbjct: 30  LVEKMRVERPKNRDHGDWATNIALQLGKSVGKNPRELAEIFASAIAQIDGVSSAEVAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+ L       +++ I+ SG +YG     KG  +N+E+VSANPTGP+H+G  R A VG
Sbjct: 90  FINIRLEAGAAGALVADILASGNDYGHGEGLKGVHINLEYVSANPTGPLHIGGARWAAVG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D+LA L  FSG +VTREYY ND G+QI+  A+S+      A  N ++  PE  Y G Y+ 
Sbjct: 150 DSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLL----AAARNQET--PEDGYGGQYIA 203

Query: 208 HVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +  ++  +  +    +     +E      + + V+ M   I++ L+    + D+F  E+
Sbjct: 204 DIAAKVQAEAKTAGDPDPATLDDEAAQEYFRSHGVELMFDEIKESLRGFRTEFDVFFHEN 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +  +   +   +D L  +G V E      K   T             +T  GDD DR 
Sbjct: 264 SLY--ETGAVTKALDYLRERGEVIE------KDGAT----------WLLTTKHGDDKDRV 305

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QIN 382
           ++KSDG+ +YFA+D+AY++ K  RG D  ++++G+DH GYV R+ A+ AA  +K    + 
Sbjct: 306 VIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGADHHGYVGRMMAMCAAYGDKPGVNMQ 365

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +++ +LV L++DG P++MSKRAGD +TL   V+ VG D+ R+ ++       L  D   +
Sbjct: 366 IIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAVGVDAARYALVRSSMDTQLAIDLDVL 425

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + ENPV+YVQYA+AR  ++ + A            P  +       D ++  LI  L
Sbjct: 426 ASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCADGFAPAEL------RDPADAALIGVL 479

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR--- 559
           A++P V+  A      + +  YL +L+  +H  +   R  P      A +  +T      
Sbjct: 480 AQFPSVVATAAAENATHLVPRYLENLSGAYHTWYGKRRVTP------AGDEPVTAEHAAL 533

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L +AV  ++ +GL+++GV +P  M
Sbjct: 534 LALNNAVGQVLRNGLDLLGVTAPERM 559


>gi|302335535|ref|YP_003800742.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319375|gb|ADK67862.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 614

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 190/603 (31%), Positives = 307/603 (50%), Gaps = 71/603 (11%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP D ++G  S+  AM  +R   + P  IA+ IV  +  DP +  V +AG GFIN YL
Sbjct: 32  LERPADTSNGDWSSTVAMRSARLARMAPAKIAKAIVDNMPPDPAITRVEVAGPGFINFYL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S S   ++  ++  +G ++G++ +G G KVN EF+SANPTGP+HVGH R A +GD++ ++
Sbjct: 92  STSAHNEVFRTVREAGSDWGKSNVGDGLKVNYEFISANPTGPLHVGHGRWAALGDSMCNV 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ------------------------AL 189
              + ++VTREYYIND G+Q++    SV  RY Q                        + 
Sbjct: 152 FEHTNHKVTREYYINDHGSQMDVFGRSVAMRYLQLDQAIKAEGFGLEDAVRLLLQDRESY 211

Query: 190 YNNDSD---------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
            +++ D               L    Y G Y+  + +E  +    + ++   E+  P  +
Sbjct: 212 VDDEQDEHPELHPYMDAFNEVLGGNSYGGDYIIQIAREFYEADGDKWVSAEPEERDPEFR 271

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291
           + + QAM++ I+     +    D++ SE   +R D    S +      L   GY+Y+   
Sbjct: 272 ERAYQAMLRRIKATCHTVRCDFDLWFSERSLYRKDTDGTSQVDRAFRRLDEMGYLYK--- 328

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                        D   L F+ST  GDD DR L+KS+G YTYFA+D+AY   K++R  + 
Sbjct: 329 ------------TDDGALWFKSTAFGDDKDRVLVKSNGEYTYFASDVAYHWNKFQRD-EY 375

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            I + G+DH GY+ R+  V  A+     +  V L + V L RDG P++MSKR G  ++  
Sbjct: 376 SIDLWGADHHGYIARVTNVCDALG-YPGKFEVDLGQFVNLLRDGEPVRMSKRKGTMVSFD 434

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ EVG D+ R+ ++ R +++ +DFD   VK++   NPV+YVQYA+AR  SI R+A  +
Sbjct: 435 ELIAEVGVDATRYTLISRSSNQTIDFDIEAVKQKDNANPVYYVQYAHARICSILRKAAGV 494

Query: 472 FPD----LDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             D    +  D   +  I    +     D +E  L   L+E+P ++      + P+++  
Sbjct: 495 GEDEAVEMGMDEVAKRAIGPAYDLSLLTDATEASLARKLSEFPELVAGCARDRAPFRITH 554

Query: 524 YLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +  +LA+ FHG ++  +  P   R V A   +L+  RL    AV   +   L +IGV +P
Sbjct: 555 FCEELAAAFHGFYASCQVLPSEGRPVDA---ELSRARLAACDAVRVNLEVALRLIGVSAP 611

Query: 583 NEM 585
           + M
Sbjct: 612 DVM 614


>gi|300781429|ref|ZP_07091283.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533136|gb|EFK54197.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 591

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 303/593 (51%), Gaps = 52/593 (8%)

Query: 5   ADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ ++    E +D        + + + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 39  ADLAATVRAITTETLDAHGLDSSVVPETVTVERPRNPEHGDYATNVALQVAKKAGTNPRE 98

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  ++  +   P++DS  +AG GFINL L  +    I++ I+  G  YG + I  G K+
Sbjct: 99  LAGWLIDALVALPEIDSADVAGPGFINLRLGAAATGGIVADILAKGEAYGSSDIYDGEKI 158

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++ FSG EVTREYY ND G QI+  A S+  
Sbjct: 159 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLV- 217

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY----SVQ 239
               A   N+   PE  Y G Y+  +   +  +    L     E    +V++      V+
Sbjct: 218 ----AAAKNEP-TPEDGYGGEYIADIASAVVAENPGIL-----EGDAAVVQEAFRREGVE 267

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   I+  L       D+F  E+     +   +   I  L   G +YE           
Sbjct: 268 KMFAQIKQSLHDFGTDFDVFFHENSLF--ESGAVDRAIQTLKDNGNLYE----------- 314

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +      RST  GDD DR +LKSDG   Y A D+AY   K++RG    IY++G+D
Sbjct: 315 -----NDGAWWLRSTDFGDDKDRVVLKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGAD 369

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL A A A+      + VL+ ++V L RDG P+KMSKRAG  ITL  +VD +G 
Sbjct: 370 HHGYIARLRAAAQALGYNPEAVEVLIGQMVNLVRDGQPVKMSKRAGTVITLDDLVDVIGV 429

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF------- 472
           D+ R+ M+       LD D    ++QS +NPV+YVQY + R  SI R+A +         
Sbjct: 430 DAARYSMVRSSVDSTLDIDLDLWEKQSNDNPVYYVQYGHTRLASIERKAAEAGVVLARSD 489

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            D + DL   +++  E E D     LI  L E+P V++ A   +EP+++A Y  +LASVF
Sbjct: 490 DDEEVDL---SLLTHEKEGD-----LIRTLGEFPAVVKAAAELREPHRIARYAEELASVF 541

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  +   +  P+      + + +   RL L  A   ++ + L ++GV +P  M
Sbjct: 542 HKFYDACQILPK---AGEDPQPIHAARLTLASASRQVLANALRLLGVTAPERM 591


>gi|294506995|ref|YP_003571053.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8]
 gi|294343323|emb|CBH24101.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8]
          Length = 562

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 190/575 (33%), Positives = 305/575 (53%), Gaps = 58/575 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPD-VDSVFIAGKGF 88
           I +E P    HG L+TN A+ L+  LG +P +IA+ +  R++  +DP  + +V +AG GF
Sbjct: 25  IELEAPDRPEHGDLATNTALRLASVLGDNPRSIADTLAERLRGRVDPARIKNVEVAGPGF 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   +  YL   L+ ++  G  +G+   G G +  +E+VSANPTGP++VGH R AV+GD
Sbjct: 85  VNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGQRALVEYVSANPTGPLNVGHGRNAVLGD 144

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---------------- 192
           T+A+L+A++GY+VTREYY NDAG Q+  LA SV  RY +AL  N                
Sbjct: 145 TIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRARY-EALAGNVPTTTLTLDDDTTVEV 203

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
               PE  Y G Y+  + + L D++   L    +   L   +  +  A+   I   L AL
Sbjct: 204 PETFPEDGYLGQYIVEIAQNLYDEHGDALCATDD---LAPFRAAAETAIFGDIEATLHAL 260

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           NI  D + +E   H  D   +  ++D LA  GY YE                +   L F+
Sbjct: 261 NIDMDGYANEQALH--DEGRVDAVLDGLADAGYTYE----------------EDGALWFK 302

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +T  G + D  L+K  G  TY   D+AY   K+ERGFD M+ V G+DH      + +   
Sbjct: 303 TTEFGTEDDTVLVKQTGEPTYRTPDIAYHAAKFERGFDLMVDVFGADHHAAYPDVLSALD 362

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +     +++V+L + V L R   P+KMS R  +++TL  ++++VG+D  RF  L R   
Sbjct: 363 VLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANYVTLDDLIEQVGADVTRFFFLMRSPD 422

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESE 490
             L+FD    +E+S++NPVFY+QYA+AR  S+  +A+++    D D DL    ++  E  
Sbjct: 423 THLNFDLELAEEESEKNPVFYLQYAHARICSVLDKAEEVGFSHDEDADL---ALLTHE-- 477

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ LI  L  +P+ ++NA  A+ P+ +  YL D+A+ F   + + R       +  
Sbjct: 478 ---DEIALIKELLRFPQELQNAAGARAPHFVPNYLRDVATAFSQFYDNCR-------IIG 527

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++L   R++L  A  +++ +GL ++G+ +P +M
Sbjct: 528 EEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562


>gi|238028767|ref|YP_002912998.1| arginyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877961|gb|ACR30294.1| Arginyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 594

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 203/617 (32%), Positives = 313/617 (50%), Gaps = 68/617 (11%)

Query: 3   LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L AD   ++   LK E D    V       I +ERP+  AHG ++ N A+ L++PLG +P
Sbjct: 12  LLADSVKQVVQALKGEADAAFAVPA-----ITLERPKAAAHGDVACNVALQLAKPLGTNP 66

Query: 62  LTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             +AE IVA +   P     V++  IAG GFINL L+    + ++ ++      +GR+  
Sbjct: 67  RQLAEQIVAAVTAQPAAAGLVEAAEIAGPGFINLRLTAGAKQAVIGAVFAERDAFGRSDR 126

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  L
Sbjct: 127 DAGRRVLLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNL 186

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLP 231
           ALS   R  + L   D+  PE  Y G Y+  + +E      +A      +    + + L 
Sbjct: 187 ALSTQAR-ARGLKPGDAAWPEAAYNGEYIADIAREYLAGATVAASDGQPVTGKGDVEDLE 245

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            ++ ++V  + +    DLKA  ++ D +  E   +  +   +   ++ L   G  YE   
Sbjct: 246 AIRRFAVAYLRREQDTDLKAFGVRFDQYYLESSLY--EEGRVERTVNALVAAGMTYE--- 300

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                            L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  
Sbjct: 301 -------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTK 347

Query: 352 MIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T
Sbjct: 348 VINIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVT 407

Query: 410 LRHVV-----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +R ++                 DE     G D+VRF ++ RK      FD     +Q+ E
Sbjct: 408 VRDLIEWSGGAAPGSEASPDQLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDE 467

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPV+YVQYA+AR  S+  + K      +  L   ++ P +S    + + L+  LAEYP +
Sbjct: 468 NPVYYVQYAHARICSVMNEWKSRHGGDEARLAGADLSPLDSR---AAMALLQKLAEYPDM 524

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +A     P+ +AFYL +LA  FH  ++  R       V  ++      R+ L+ A   
Sbjct: 525 LTHAAGELAPHAVAFYLRELAGEFHSFYNAER-------VLVDDEAQRTARIALLAATRQ 577

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GL ++GV SP++M
Sbjct: 578 VLANGLAVLGVSSPSKM 594


>gi|306835846|ref|ZP_07468842.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568263|gb|EFM43832.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 550

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 186/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+  +  ++  +L D   +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLVKESATEVMAEHDLDASVLPDTATVERPRNPEHGDYATNLALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
               +  ++     +    IAG GFIN+ L+ +   +I++ I+ +G +YG N    G K+
Sbjct: 64  FGGWLAEKLAEHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   + +K  S L     +       D  V+ M  
Sbjct: 184 AAKG------EPTPEDGYGGDYIHDIASAVVEKNPSALEGDAAQVQEAFRAD-GVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGIDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +  +    +
Sbjct: 399 YSLVRSSADQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVSSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+ +A   +EP+++A Y  +LA VFH  +   +  P
Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   RL L  A   ++++ L ++GV SP +M
Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550


>gi|291320435|ref|YP_003515699.1| arginyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752770|emb|CBH40745.1| Arginyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 539

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 204/585 (34%), Positives = 310/585 (52%), Gaps = 55/585 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   +L++ LKEI   + + + +    + E  +   HG L+TN A+       + P+ +A
Sbjct: 5   DLKEKLESKLKEIASSLGITRSVF---LTESKK---HGDLTTNMAL---GNANIKPMELA 55

Query: 66  ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKV 123
             IV+ I ++   + ++ +A  GFIN  +   YL   ++ I+  G  YG+ N +GK   V
Sbjct: 56  NQIVSMINLEEFGIKNISVANPGFINFSIGDDYLVSGVNQILKLGKNYGKGNKVGK---V 112

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA S++ 
Sbjct: 113 NVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVVREYYINDAGNQINVLANSLWS 172

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-WLPIVKDYSVQAMM 242
           RY+Q  Y  D  +PE  Y G  +    ++   K+  +  N   +K  L +VK+ ++   M
Sbjct: 173 RYKQIFY-PDYSMPEESYKGEDIVWGAQKFYAKFGDKFKNNELDKELLELVKNEAISIFM 231

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I++DL    +  D + SE   +  D   I++ I +L +  Y  +G             
Sbjct: 232 SKIQEDLANFGVWFDNYFSEKSLYENDEVKIKETIKSL-KNAYDNDG------------- 277

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVMGSDH 360
                 L  ++T+ GDD DR L+KSDGSYTYF  D+ Y + KY+R G D  +I V G+DH
Sbjct: 278 -----ALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYKRMGADATIINVWGADH 332

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR++     +   +  + VL  +LVRL ++G   KMSKR G    L   V  VG D
Sbjct: 333 SGYVKRMQCAVKDLGLNEQNLVVLCMQLVRLVKNGEEFKMSKRKGTSFFLNEFVKMVGKD 392

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           S RF++L R  +  LDFD      Q+ +NP   VQYA ARC S+ R+A       + D  
Sbjct: 393 SARFLLLDRTLNSKLDFDINLATSQNNDNPAILVQYANARCHSLIRKA-------NIDSN 445

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               I  + + D S   LI  L E+P V+E +      + L  YL  LA  F+  +++  
Sbjct: 446 NLYAISFDKQSDNS---LITTLLEFPSVVEKSADKYATHLLTQYLVKLAKEFNSWYTN-- 500

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +P+L  + + N    + ++ LV AV+  I +GL ++ V +P  M
Sbjct: 501 -SPKL--IGSENE---ISKIALVKAVSITIENGLKLLEVSAPVSM 539


>gi|298345508|ref|YP_003718195.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304391064|ref|ZP_07373016.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315656160|ref|ZP_07909051.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298235569|gb|ADI66701.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304325947|gb|EFL93193.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315493162|gb|EFU82762.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 559

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 179/566 (31%), Positives = 296/566 (52%), Gaps = 44/566 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + +++ +ERP++  HG  +TN A+ L + +G +P  +AE+  + I     V S  +AG G
Sbjct: 30  LAEKMRVERPKNRDHGDWATNIALQLGKSVGKNPRELAEIFASAIAQIDGVSSAEVAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+ L       +++ I+ SG +YG     KG  +N+E+VSANPTGP+H+G  R A VG
Sbjct: 90  FINIRLEAGAAGALVADILASGNDYGHGEGLKGVHINLEYVSANPTGPLHIGGARWAAVG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D+LA L  FSG +VTREYY ND G+QI+  A+S+    +        + PE  Y G Y+ 
Sbjct: 150 DSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLLAAAR------GQETPEDGYGGQYIA 203

Query: 208 HVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +  ++  +  +    +     +E      + + V+ M   I++ L+    + D+F  E+
Sbjct: 204 DIAAKVQAEAKAAGDPDPATLDDEAAQEYFRSHGVELMFDEIKESLRGFRTEFDVFFHEN 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +  +   +   +D L  +G V E      K   T             +T  GDD DR 
Sbjct: 264 SLY--ETGAVTKALDYLRERGEVIE------KDGAT----------WLLTTKHGDDKDRV 305

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QIN 382
           ++KSDG+ +YFA+D+AY++ K  RG D  ++++G+DH GYV R+ A+ AA  +K    + 
Sbjct: 306 VIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGADHHGYVGRMMAMCAAYGDKPGVNMQ 365

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +++ +LV L++DG P++MSKRAGD +TL   V+ VG D+ R+ ++       L  D   +
Sbjct: 366 IIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAVGVDAARYALVRSSMDTQLAIDLDVL 425

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + ENPV+YVQYA+AR  ++ + A            P      E   D ++  LI  L
Sbjct: 426 ASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCADGFAP------EELRDPADAALIGVL 479

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR--- 559
           A++P V+  A      + +  YL +L+  +H  +   R  P      A +  +T      
Sbjct: 480 AQFPSVVATAAAENATHLVPRYLENLSGAYHTWYGKRRVTP------AGDEPVTAEHAAL 533

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L +AV  ++ +GL+++GV +P  M
Sbjct: 534 LALNNAVGQVLRNGLDLLGVTAPERM 559


>gi|15827558|ref|NP_301821.1| arginyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230035|ref|YP_002503451.1| arginyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432208|sp|P45840|SYR_MYCLE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782977|sp|B8ZR24|SYR_MYCLB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13093108|emb|CAC31508.1| arginyl-tRNA synthase [Mycobacterium leprae]
 gi|219933142|emb|CAR71222.1| arginyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 550

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/565 (33%), Positives = 287/565 (50%), Gaps = 57/565 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR+  HG  S+N AM L + +G +PL +A  +   +     +  V +AG GFIN+
Sbjct: 32  VTVERPRNPEHGDYSSNLAMQLGKKVGANPLELAGWLAEVLAQAGGIADVEVAGPGFINM 91

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L  S    I+++++ +   +G +    G ++N+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 92  RLDASAQAMIVNTVINADKNFGHSDDLAGYQINLEFVSANPTGPIHIGGTRWAAVGDALG 151

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L++  G  V REYY ND GAQI+    S+    +  L       P   Y G Y+  +  
Sbjct: 152 RLLSTQGAAVVREYYFNDHGAQIDRFTNSLIAAAKGEL------TPADGYAGTYVTDIAA 205

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  + +   L+ PE +    V++  V  M   I+  L       D++  ED  H     
Sbjct: 206 QVMQQ-APYALSLPESEMHETVREIGVDLMFTHIKKSLHEFGTDFDVYTHEDSMHA--SG 262

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + + I  L   G VYE                    L  R++  GDD DR ++KSDG  
Sbjct: 263 RVDEAIARLRDTGNVYE----------------KDGALWLRTSAFGDDKDRVVIKSDGKP 306

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A DLAY+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V L
Sbjct: 307 AYIAGDLAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPAIVEVLIGQMVNL 366

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             DG  ++MSKR+G+ ITL  +V+ +G D+ R+ ++       +D D       S ENPV
Sbjct: 367 VCDGQLVRMSKRSGNVITLDDLVEAIGVDAARYSLIRSSVDTPIDIDLALWSSSSNENPV 426

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------L 502
           +YVQYA+AR  ++ R A       +F L P          DT  L+L+ H         +
Sbjct: 427 YYVQYAHARLSALARNAA------EFGLIP----------DTGHLELLSHDKEGALLRTV 470

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMMRL 560
            E+P+V++ A   +EP+++  YL DLA  +H  +   R  P     Q + +   L   RL
Sbjct: 471 GEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP-----QGDEKPTDLHTARL 525

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A   +I +GL I+GV +P  M
Sbjct: 526 ALCQANRQVIANGLAILGVSAPERM 550


>gi|298253127|ref|ZP_06976919.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532522|gb|EFH71408.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 598

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 189/596 (31%), Positives = 314/596 (52%), Gaps = 72/596 (12%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ + RP+D AHG  +TN AM L++  G+ P  +AEL   R++    + SV +AG GFI
Sbjct: 35  EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPHDLAELFAERLQEAEGIASVEVAGPGFI 94

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +    ++  ++  G  +G+N    G  +N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 95  NITLDSASAAAVVDEVLKQGAAFGKNTHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  +
Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208

Query: 210 GKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250
              +   A+    ++L+ P      +E+ LP+ +  S Q           M   IR  ++
Sbjct: 209 ADSVIKEANADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  D++  E+  +  +   +   I +L  +G ++E      K   T           
Sbjct: 269 DFRVSFDVWFHENSLY--EDGEVERAIADLRERGDIFE------KDGAT----------W 310

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367
           F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+
Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370

Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            A+ AA  +K  + + +L+ +LV + +DG P++MSKRAG+ IT+  +VD +G D+ R+ +
Sbjct: 371 MAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485
                +  +D D   +   S +NPV+YVQYA+AR  ++ R A D     D  DL   N  
Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQDGADLSLLNT- 489

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540
                   ++ +++  LA++P  +  A   + P+++A YL DLA+ +H  ++  R     
Sbjct: 490 -------ETDGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542

Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
             +P  R  +A      +           RL+L  AV ++I +GL+++GV +P +M
Sbjct: 543 LTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM 598


>gi|227501671|ref|ZP_03931720.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077696|gb|EEI15659.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 550

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 185/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K     +  +  ++  +L D + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLVKESATAVMAEHDLDASVLPDSVTVERPRNPEHGDYATNLALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
               +  ++     +    IAG GFIN+ L+ +   +I++ I+ +G +YG N    G K+
Sbjct: 64  FGGWLAEKLAQHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   + +K  S L     +       D  V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGDYIHDIASAVVEKNPSALEGDAAQVQEAFRAD-GVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +  +    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVSSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+ +A   +EP+++A Y  +LA VFH  +   +  P
Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   RL L  A   ++++ L ++GV SP +M
Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550


>gi|134297105|ref|YP_001120840.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166232769|sp|A4JIA2|SYR_BURVG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134140262|gb|ABO56005.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 593

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 204/616 (33%), Positives = 316/616 (51%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D +      ++  I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVAQVAHALKGADAEF-----VIPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL +S +  + +++++   G  +G +   
Sbjct: 67  QLAERIVAALVAQPAAQGLVDAAEIAGPGFINLRVSAAAKQAVIAAVFEQGRAFGTSQRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKRVLVEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIANLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G  +A K    +    + + L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGATVAAKDGEPVTGARDIENLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 RHV-----------------VDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +                 +DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDMIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +      + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKARY-NVDVAQLPGADLSQLTS--PQAVSLMQKLAEYPDLL 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAMLGVSAPAKM 593


>gi|270284697|ref|ZP_05966509.2| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276344|gb|EFA22198.1| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 631

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 190/601 (31%), Positives = 315/601 (52%), Gaps = 70/601 (11%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           VE   +++  + RP+D AHG  ++NAAM L++  G+ P  +AE  V +++  P + SV +
Sbjct: 62  VELPPVEKFSVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAEQFVEKLQDVPGIASVEV 121

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFIN+ L  +    ++  ++  G  +G+N    G  +N+EFVSANPTGP+H+G  R 
Sbjct: 122 AGPGFINITLDSASAAAVVDQVLAQGSAFGKNTHLGGKTLNLEFVSANPTGPIHIGGTRW 181

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A VGD++A ++  +G +V REYY ND G QIN  A S+          ++   P   Y G
Sbjct: 182 AAVGDSMARVLEANGAKVIREYYFNDHGEQINRFAKSLV------AAAHEETTPVDGYKG 235

Query: 204 VYLKHVGKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKI 244
            Y+  + + +   A+    ++LN P      +E   P+ +  S Q           M   
Sbjct: 236 AYIDEIARRVIAEANADGVDILNLPRVDGGTDEHGEPLGEGDSEQREEFRKRAVPMMFDE 295

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+  +K   +  D++  E+  +  +   +   I +L  +G ++E      K   T     
Sbjct: 296 IQQSMKNFRVNFDVWFHENSLY--EDGEVDKAIADLRARGDIFE------KDGAT----- 342

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHS 361
                 F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH 
Sbjct: 343 -----WFASTKHGDDKDRVIIKSDGNYAYFAADVAYYRNKRHREEGSADVAIYMLGADHH 397

Query: 362 GYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           GY+ R+ A+ AA  ++  Q + +L+ +LV + +DG P++MSKRAG+ +T+  +VD +G D
Sbjct: 398 GYIGRMMAMCAAYGDEPGQHMQILIGQLVNVMKDGKPVRMSKRAGNIVTIDDLVDAIGVD 457

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+ +     +  +D D   +   S ENPV+YVQYA+AR  ++ R A +     D    
Sbjct: 458 ASRYSLARTDYNSPVDIDLDLLASHSNENPVYYVQYAHARSCNVDRNAAEAGITTD---- 513

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             ++   ++E D    ++I  LA++P V+  A   + P+++A YL DLA+ +H  ++  R
Sbjct: 514 GADLALLDTEADG---EVIAALAQWPGVLAEAGDKRAPHRVAHYLEDLAAAYHKWYNVER 570

Query: 541 ENP----------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             P                 LR  +         RL+L  AV  +I +GL+++GV +P++
Sbjct: 571 VVPMGLTDPEQHLDTQAAEALRIAKNPEPARAAARLKLNDAVQQVIVNGLDLLGVSAPDK 630

Query: 585 M 585
           M
Sbjct: 631 M 631


>gi|25027832|ref|NP_737886.1| arginyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259506223|ref|ZP_05749125.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|38372529|sp|Q8FQ57|SYR_COREF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|23493115|dbj|BAC18086.1| putative arginyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259166200|gb|EEW50754.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 550

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 192/585 (32%), Positives = 303/585 (51%), Gaps = 42/585 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+     ++  +L ++IV+ERPR+  HG  +TN A+ +++ +G+ P  
Sbjct: 4   ADLATLIKQTAVEVLTSRDLDASMLPEQIVVERPRNPEHGDYATNVALQVAKKVGVTPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +  D  +DS  IAG GFIN+ L+ +   +I++ I+  G ++G +       V
Sbjct: 64  LGTWLAEALAADDSIDSAEIAGPGFINIRLAAAAQGEIVAKILEQGEKFGTSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  +G +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ + + +  K+   L   PEE    + +   V+ M  
Sbjct: 184 AAKG------EPTPEDGYGGEYIREIAEAIVAKHPDALDRTPEETQ-ELFRSEGVEMMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            IR+ L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIRESLHEFGTDFDVYFHENSLF--ESGAVDRAVQKLKDNGNLYES-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY + K+ERG +  IY++G+DH GY
Sbjct: 281 --DGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVQDKFERGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+      + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYAPEGVEVLIGQMVNLLRDGTAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A D+   + D D  L 
Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAADLGVTYEDADLSLL 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +           E  LI  L E+P VI  A   +EP+++A Y  +LA  FH  +   +
Sbjct: 459 THD----------REGDLIRTLGEFPAVIRAAADLREPHRIARYAEELAGTFHRFYDSCQ 508

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P+    +A    +   RL L  A    + + L ++GV +P +M
Sbjct: 509 ILPKADEEKA---PIHAARLALAAATRQTLANALALVGVSAPEKM 550


>gi|121592776|ref|YP_984672.1| arginyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120604856|gb|ABM40596.1| arginyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 577

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 194/588 (32%), Positives = 306/588 (52%), Gaps = 63/588 (10%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78
           KV      R   E P+  AHG L+  AAM L++PL  +P  + E + A ++  P     V
Sbjct: 28  KVSPGAGSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLQAALEATPAFQKWV 87

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            ++ IAG GF+N+ L P+  ++++  ++  G +YG     +G KV +EFVSANPTGP+HV
Sbjct: 88  QAIEIAGPGFLNIRLKPAAKQQVVHEVLAQGAQYGYQ-PARGEKVLVEFVSANPTGPLHV 146

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNND 193
           GH R A +GD ++ L A  G+ V RE+Y NDAG QI+TL  S   R +        +  D
Sbjct: 147 GHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTD 206

Query: 194 SDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI---VKDYS--VQAMMKIIR 246
           +D P  + +Y G Y+    +++AD + ++     +++       V+DY    Q  +  +R
Sbjct: 207 ADNPLAKNFYNGDYI----QDIADAFLAKATVQADDRAFTANGDVEDYENIRQFAVAYLR 262

Query: 247 D----DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +    DL+A N+Q D +  E   +      +   +  L   G  YE              
Sbjct: 263 NEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-------------- 306

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 L  +ST  GDD DR + K DG+YTYF  D+AY   K++RGF  ++ + G+DH G
Sbjct: 307 --QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFTKVVNIQGTDHHG 364

Query: 363 YVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            + R+ A   AA V   +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D
Sbjct: 365 TIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKD 424

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI---FRQAKDIFPDLDF 477
           +VRF +L RK      FD      Q+ +NPV+YVQYA+AR  S+   +R+  D+    D 
Sbjct: 425 AVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDYDVAALRDV 484

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           DL P    PQ          L++ LA+YP ++  A     P+ + FYL DLA+ +H ++ 
Sbjct: 485 DLSPLEG-PQAQA-------LMLLLAKYPEMLTAAAAGNAPHDVTFYLRDLAAAYHSYYD 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R       +  ++  +   RL LV A A ++++GL ++GV +P  M
Sbjct: 537 AER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 577


>gi|227498070|ref|ZP_03928243.1| arginine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832538|gb|EEH64921.1| arginine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 533

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 178/519 (34%), Positives = 274/519 (52%), Gaps = 39/519 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR   HG  +TN AM L++  G +P  + EL+ AR+     V SV +AG GF+N+ L
Sbjct: 35  VERPRSREHGDWATNVAMQLAKKAGTNPRALGELLAARLGEVDGVASVEVAGPGFLNIRL 94

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +   ++  +I+ +G  YGRN    GT VN+E+VSANPTGP+H+G  R A VGD+LA +
Sbjct: 95  DAASAGELARTILRAGASYGRNDSLAGTHVNLEYVSANPTGPVHLGGARWAAVGDSLARI 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +A  G +VTREYY ND G QI+  A S+    +        + PE  Y G Y+  + + +
Sbjct: 155 LAACGAQVTREYYFNDHGTQIDRFARSLLAAAR------GQETPEDGYGGAYIGEIAQTV 208

Query: 214 ADKYSSEL-------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
               S EL          P+ +   + +   V  M   I+ +L   +   D+F  ED  H
Sbjct: 209 T---SGELEAGRPDPAALPDAEATEVFRARGVDLMFDSIKAELHEFHSDFDVFFHEDSLH 265

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   I+ L  +G + E                       R+T  GDD DR L+K
Sbjct: 266 --ESGAVAAAIERLRERGVIEE----------------HDGATWLRTTDFGDDKDRVLIK 307

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLL 385
           SDG   YFA D+AY+  K +RG D  IY++G+DH GY+ R+ A+ AA  +     + +L+
Sbjct: 308 SDGDAAYFAGDVAYYLDKRQRGADCAIYLLGADHHGYIGRMMAMCAAFGDTPGVNMQILI 367

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +LV L ++G P++MSKRAG  +TL  +V  VG D+ R+ +       ++D D   +   
Sbjct: 368 GQLVNLVKNGQPVRMSKRAGTIVTLEDLVSAVGVDAARYALTRSSMDSMIDIDLDLLASS 427

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S ENPV+YVQYA+AR R++ R A +   + +  +         +  D ++  L+  LA+Y
Sbjct: 428 SNENPVYYVQYAHARTRNVARNAAEHGVEREGAI----AFDPAALDDAADSALLGVLAQY 483

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           P V+  A   +E +++A YL +LA  +H  ++  R  PR
Sbjct: 484 PAVVAQAASLREQHRVARYLEELAGAYHAWYAATRVTPR 522


>gi|300313639|ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300076424|gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 577

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 203/615 (33%), Positives = 307/615 (49%), Gaps = 70/615 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A    R+ +        +  E  +   I +ERPRD +HG ++ N AM L++PL  +P 
Sbjct: 1   MLAQQKQRISDLFSSALQPLLAESGLTPTITLERPRDASHGDVACNIAMQLAKPLKKNPR 60

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +A+ IVA +  DP     V+SV IAG GFINL ++ +  + ++  I   G  YGR   G
Sbjct: 61  ELAQAIVAAVMADPAREDLVESVEIAGPGFINLRVAAAAKQAVVKVIHEQGEAYGRGSAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTGP+HVGH R   +GD L+SL+   GY+V RE+Y NDAG QI TLA
Sbjct: 121 AGKKVLVEFVSANPTGPLHVGHGRQGALGDALSSLLEAQGYDVLREFYYNDAGVQIATLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS------SELLNFPEEKWLPI 232
            SV  R  +     D++ PE  Y G Y+  + ++  DK +        +    E   +  
Sbjct: 181 TSVQAR-ARGFKPGDAEWPESAYNGDYIADIARDFLDKKTVSASDGEPVTGSGEVDDIES 239

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L   G  YE    
Sbjct: 240 IRRFAVAYLRHEQDLDLQAFGVKFDNYYLESSLYA--DGKVAAAVDALIAAGKTYE---- 293

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + K+DG+YTYF  D+AY   K++RG+  +
Sbjct: 294 ------------QDGALWLRTTDYGDDKDRVMKKTDGTYTYFVPDVAYHINKWQRGYGKV 341

Query: 353 IYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A   AA V   +   + +L ++V + R+G  +K+SKRAG ++TL
Sbjct: 342 INIQGSDHHGTIARVRAGLQAAGVGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401

Query: 411 RHVVD--------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           R +++                G D+VRF ++ RK      FD      QS ENPV+YVQY
Sbjct: 402 RDLIEWSAGEPVEGQERDLTRGRDAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQY 461

Query: 457 AYARCRSIF------RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           A+AR  ++        +A     DL     PR            E  L+  LAEYP ++ 
Sbjct: 462 AHARICTVLGKSGVDEEALKSSADLSLLTAPR------------EATLLAKLAEYPDMLA 509

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+++AFYL DLA   H +++  R       V  ++      RL L+ A   ++
Sbjct: 510 HALQELGPHQVAFYLRDLAGELHSYYNAER-------VLVDDVPTRSARLALLSATRQVL 562

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P  M
Sbjct: 563 RNGLALLGVSAPARM 577


>gi|115353019|ref|YP_774858.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322101|sp|Q0BBE9|SYR_BURCM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115283007|gb|ABI88524.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 593

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 204/616 (33%), Positives = 314/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++   G  +G +   
Sbjct: 67  QLAEKIVAALTAQPAAQGLVDAADIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  + ++      +A K    +    +   L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      V   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +      + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTS--AQAVSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|254000508|ref|YP_003052571.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253987187|gb|ACT52044.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 552

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 187/561 (33%), Positives = 290/561 (51%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ERP+   HG  +TN AM+L++PL  +P  IAE ++  +     V  V IAG GFIN 
Sbjct: 25  IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAESLIQALPASEYVAKVEIAGAGFINF 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+      +++ I   G  +G N  G+  KV +EFVSANPTGP+HVGH R A VGD LA
Sbjct: 85  FLNGQARHGVIAQIREQGDRFGHNNAGQQRKVQVEFVSANPTGPLHVGHGRGAAVGDCLA 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A +G++VTRE+Y NDAGAQI+ L  SV  R  Q L       PE  Y G Y+  + K
Sbjct: 145 RLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-AQGLTPEHPTFPEEGYRGEYIIDIAK 203

Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                E       ++    +   L  ++ ++V  +      DL+A  I+ D+F  E   +
Sbjct: 204 AYLAGETVVADDQQVTASGDVNDLESIRRFAVAYLRHEQDLDLQAFQIKFDVFSLESSLY 263

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   +  L   G+ YE                    L  ++T  GDD DR + K
Sbjct: 264 T--EGKVESTVQALINSGHTYE----------------QDDALWLKTTDFGDDKDRVMRK 305

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384
            +G YTYF  D+AY   K++RGF+ +I   G+DH   + R+ A   A  +   +   + +
Sbjct: 306 REGGYTYFVPDVAYHVEKWKRGFERVINEQGADHHSTITRVRAGLQALDIGIPQGWPDYV 365

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + R G  +K+SKRAG ++TLR +++EVG D+ R+ +  R+    L FD    + 
Sbjct: 366 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRADSQLVFDIDLARA 425

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q+ +NPV+Y+QYA+AR  S+  Q       L      R   P E+        L+  L E
Sbjct: 426 QTNDNPVYYIQYAHARICSVLGQWGGDESSLVGADLSRLDAPHEAA-------LLQRLDE 478

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V++NA     P+ +A YL +LAS  H ++     N +   V+  +  L + R+ L+ 
Sbjct: 479 FSDVVKNAADELAPHMVANYLKELASDLHSYY-----NAQQFLVE--DSALKLARMALIS 531

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL+++GV +P +M
Sbjct: 532 ATRQVLKNGLDLLGVSAPEKM 552


>gi|313202467|ref|YP_004041125.1| arginyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441783|gb|ADQ85889.1| arginyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 552

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 187/561 (33%), Positives = 290/561 (51%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +ERP+   HG  +TN AM+L++PL  +P  IAE ++  +     V  V IAG GFIN 
Sbjct: 25  IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAESLIQALPASEYVAKVEIAGAGFINF 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+      +++ I   G  +G N  G+  KV +EFVSANPTGP+HVGH R A VGD LA
Sbjct: 85  FLNGQARHGVIAQIREQGERFGHNNAGQQRKVQVEFVSANPTGPLHVGHGRGAAVGDCLA 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+A +G++VTRE+Y NDAGAQI+ L  SV  R  Q L       PE  Y G Y+  + K
Sbjct: 145 RLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-AQGLTPEHPTFPEEGYRGEYIIDIAK 203

Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                E       ++    +   L  ++ ++V  +      DL+A  I+ D+F  E   +
Sbjct: 204 AYLAGETVVADDQQVTASGDVNDLESIRRFAVAYLRHEQDLDLQAFQIKFDVFSLESSLY 263

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   +  L   G+ YE                    L  ++T  GDD DR + K
Sbjct: 264 T--EGKVESTVQALINSGHTYE----------------QDDALWLKTTDFGDDKDRVMRK 305

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384
            +G YTYF  D+AY   K++RGF+ +I   G+DH   + R+ A   A  +   +   + +
Sbjct: 306 REGGYTYFVPDVAYHVEKWKRGFERVINEQGADHHSTITRVRAGLQALDIGIPQGWPDYV 365

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + R G  +K+SKRAG ++TLR +++EVG D+ R+ +  R+    L FD    + 
Sbjct: 366 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRADSQLVFDIDLARA 425

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q+ +NPV+Y+QYA+AR  S+  Q       L      R   P E+        L+  L E
Sbjct: 426 QTNDNPVYYIQYAHARICSVLGQWGGDESSLVGADLSRLDAPHEAA-------LLQRLDE 478

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V++NA     P+ +A YL +LAS  H ++     N +   V+  +  L + R+ L+ 
Sbjct: 479 FSDVVKNAADELAPHMVANYLKELASDLHSYY-----NAQQFLVE--DSALKLARMALIS 531

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL+++GV +P +M
Sbjct: 532 ATRQVLKNGLDLLGVSAPEKM 552


>gi|297569633|ref|YP_003690977.1| arginyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925548|gb|ADH86358.1| arginyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 555

 Score =  300 bits (767), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 187/563 (33%), Positives = 295/563 (52%), Gaps = 51/563 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFI 89
           +E P+    G  +TN AM+++      P  IAE +V  +    +   +F    +AG GF+
Sbjct: 33  VEEPKRAGQGDFATNLAMVVAGREKRKPREIAEALVGLLSDPANNGDLFARVEVAGPGFV 92

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N ++ P   + ++ +++  G +YGR   G+G  V +EFVSANPTGP+ VGH R AV+GD 
Sbjct: 93  NCFVKPEVWQGVVPAVLARGEDYGRGHSGEGRSVLVEFVSANPTGPLSVGHGRQAVLGDA 152

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A L+   GY VTREYY NDAG Q+  L  SV  RY + L     D PE  Y G Y++ +
Sbjct: 153 IARLLTAVGYRVTREYYYNDAGRQMRVLGESVQARYLE-LLGRSGDFPEDGYQGEYIREI 211

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + L ++    L + P+   LP  K  + + +   I   L  L I+ D + +E   +  +
Sbjct: 212 AQALVNEQGEALKDAPDH--LPFTKK-AEEVIFADINATLARLGIKFDHYYNEHTLY--E 266

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + D++ +L  +G VY               D D   + F++T  G + DR ++KS G
Sbjct: 267 QGLVDDVVASLRDKGLVY---------------DQD-GAVWFKTTEFGLEQDRVIIKSSG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY   D+AY + K  RG+D ++ V+GSDH   V  + A   A+     ++  ++ + V
Sbjct: 311 EPTYRLPDIAYHREKMRRGYDWLVNVLGSDHIATVPDVMAGLEALGYDSGKVTTVIHQFV 370

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R+G  +KMS R   F+T+  ++D VG+D  RF  L RK    L+FD     ++ +EN
Sbjct: 371 TLMREGQQVKMSTRKATFVTVDELLDLVGADVARFFFLMRKADSQLEFDLDLATKEGQEN 430

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-------FDTSELQLIVHL 502
           PV+YVQYA+AR  SI RQA++           + V+P  +E           EL L+  +
Sbjct: 431 PVYYVQYAHARLCSIERQARE-----------KGVVPAAAEEIDFSRLEQAEELDLLQAM 479

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A  P ++E+A  A EP+++ FYL D+A+ FHG+++  R       +   +  L+  RL L
Sbjct: 480 AGLPSLLESAAGALEPHRVVFYLQDMAAKFHGYYNRHR-------IVGEDLALSQARLAL 532

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A+  +  +GL +IGV +P  M
Sbjct: 533 ARALRVVFANGLQLIGVSAPESM 555


>gi|172061871|ref|YP_001809523.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689136|sp|B1YNQ7|SYR_BURA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171994388|gb|ACB65307.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 593

 Score =  300 bits (767), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++   G  +G +   
Sbjct: 67  QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRK 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  + ++      +A K    +    +   L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +      + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLAQLTS--PQAVSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|332286305|ref|YP_004418216.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430258|gb|AEC21592.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 561

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 189/580 (32%), Positives = 305/580 (52%), Gaps = 54/580 (9%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78
           K+  +    +++ERP+  AHG ++ N AM L++P   +P  +A+ IV  +  +P     +
Sbjct: 19  KIVPEATATVLLERPKVAAHGDIACNIAMQLAKPARRNPRELAQNIVDALLAEPATQALI 78

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            S  IAG GFIN  L+ +    +L +I   G  YG +L     K+ +EFVSANPTGP+HV
Sbjct: 79  SSAEIAGPGFINFRLATAARHAVLDAIAQEGARYG-HLSANQQKLMVEFVSANPTGPLHV 137

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A +GD++  L    GY+VTRE+Y NDAG QI+ LA+SV  R  + +  + SD P 
Sbjct: 138 GHSRQAALGDSICRLFTSQGYDVTREFYYNDAGNQIDNLAISVQAR-ARGIEPDASDFPA 196

Query: 199 GYYPGVYLKHVGKEL---ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKAL 252
             Y G Y+  + ++    A    ++ ++      +  + D  V A+  + R+   DL+A 
Sbjct: 197 DGYKGDYIVDIARDFQAGATVTGTDGVSVTATGNIGSLDDIRVFAVAYLRREQDLDLQAF 256

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            ++ D +  E   +      +   +  L   G+ YE                +   L  R
Sbjct: 257 GLKFDNYYLESSLY--TTGRVEQTVKALIDAGHTYE----------------NEGALWLR 298

Query: 313 STMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           +T +  GDD DR + KS+G YTYF  D+AY   K+ERGF + I + G+DH G + R+ A 
Sbjct: 299 TTELGTGDDKDRVMRKSEGGYTYFVPDVAYHVAKWERGFHHAINIQGTDHHGTIARVRAG 358

Query: 371 AAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              ++    K     +L ++V++ R+G  +K+SKRAG ++T+R ++D VG D+VR+ +  
Sbjct: 359 LQGLNLGIPKDFPAYILHKMVKVVRNGAEVKISKRAGSYVTMRDLIDWVGQDAVRYFLSQ 418

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVI 485
           R+      FD      +S+ENPV+Y+QYA+AR  S+  Q+ ++    P  D  L      
Sbjct: 419 RRADSEFVFDIDLALSKSEENPVYYIQYAHARICSMLTQSAELAAQVPQADVSLLTA--- 475

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                   +E  L+  L+EYP ++  AT    P+ LAF+L D A+ FH  ++  R     
Sbjct: 476 -------PTEFALLQRLSEYPAMLALATQELAPHHLAFWLRDCAADFHAWYNAER----- 523

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V  ++ +L + RL+L HA   ++ +GL ++GV +P  M
Sbjct: 524 --VLVDDSQLKLARLRLAHATGQVVANGLELLGVSAPERM 561


>gi|300692742|ref|YP_003753737.1| arginyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079802|emb|CBJ52479.1| Arginyl-tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 600

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 201/601 (33%), Positives = 297/601 (49%), Gaps = 77/601 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +V IAG G
Sbjct: 30  IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LSP+    +L+++      YG      G  V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLSPTARTDVLAAVFAESDRYGAADTHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LASL+ + G++V RE+Y NDAG QI+ LA+SV  R  +     D+  PE  Y G Y+ 
Sbjct: 150 DALASLLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGFKPGDAGWPEAAYNGDYIA 208

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +    + + L  ++ ++V  +      DL+A  ++ D +  
Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      ++  +D L   G  YE                    L  R+T  GDD D
Sbjct: 269 ESSLYA--DGKVQQTVDALIDAGKTYE----------------QDGALWLRTTDDGDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + KSDGSYTYF  D+AY   K+ RGF  +I V GSDH G + R+ A      +   K 
Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLGLGIPKG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417
             + +L ++V + +DG  +K+SKRAG ++T+R +             VD +         
Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGVP 430

Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465
                   G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  S+F    
Sbjct: 431 SWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490

Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D+      DL          E     + L+  +A +P V+ +A     P+ +AFY
Sbjct: 491 AREGGDVASLAGADL----AAVAGPEASPQAVALVQRIAAFPDVLADAARELAPHAVAFY 546

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P +
Sbjct: 547 LRDLAGDFHTFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|222109552|ref|YP_002551816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782960|sp|B9MBD2|SYR_DIAST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221728996|gb|ACM31816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 567

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 194/588 (32%), Positives = 306/588 (52%), Gaps = 63/588 (10%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78
           KV      R   E P+  AHG L+  AAM L++PL  +P  + E + A ++  P     V
Sbjct: 18  KVSPGAGSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLQAALEATPAFQKWV 77

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            ++ IAG GF+N+ L P+  ++++  ++  G +YG     +G KV +EFVSANPTGP+HV
Sbjct: 78  QAIEIAGPGFLNIRLKPAAKQQVVREVLAQGAQYGYQ-PARGEKVLVEFVSANPTGPLHV 136

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNND 193
           GH R A +GD ++ L A  G+ V RE+Y NDAG QI+TL  S   R +        +  D
Sbjct: 137 GHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTD 196

Query: 194 SDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI---VKDYS--VQAMMKIIR 246
           S+ P  + +Y G Y+    +++AD + ++     +++       V+DY    Q  +  +R
Sbjct: 197 SENPLAKNFYNGDYI----QDIADAFLAKATVQADDRAFTANGDVEDYENIRQFAVAYLR 252

Query: 247 D----DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +    DL+A N+Q D +  E   +      +   +  L   G  YE              
Sbjct: 253 NEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-------------- 296

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 L  +ST  GDD DR + K DG+YTYF  D+AY   K++RGF  ++ + G+DH G
Sbjct: 297 --QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFTKVVNIQGTDHHG 354

Query: 363 YVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            + R+ A   AA V   +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D
Sbjct: 355 TIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKD 414

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI---FRQAKDIFPDLDF 477
           +VRF +L RK      FD      Q+ +NPV+YVQYA+AR  S+   +R+  D+    D 
Sbjct: 415 AVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDYDVAALRDV 474

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           DL P    PQ          L++ LA+YP ++  A     P+ + FYL DLA+ +H ++ 
Sbjct: 475 DLSPLEG-PQAQA-------LMLLLAKYPEMLTAAAAGNAPHDVTFYLRDLAAAYHSYYD 526

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R       +  ++  +   RL LV A A ++++GL ++GV +P  M
Sbjct: 527 AER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 567


>gi|148270771|ref|YP_001245231.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166200584|sp|A5IN82|SYR_THEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147736315|gb|ABQ47655.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 546

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 188/557 (33%), Positives = 289/557 (51%), Gaps = 41/557 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P     G LSTNAAM L++ L  +P  IA+ IV  +  DP  D + I G GFIN +L
Sbjct: 26  IEIPPKKEFGDLSTNAAMKLAKTLKKNPREIAQEIVKSLDEDPSFDRIEIMGPGFINFFL 85

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S   LR ++ +++    EYGR   G G K+  E+ SANPTGP  VGH R  ++GD L+ +
Sbjct: 86  SNELLRGVVKTVLERKDEYGRENTGNGVKIQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+VTRE YINDAG QI  LA S++ RY Q L   + ++PEG Y G YL  + ++L
Sbjct: 146 FKELGYDVTREMYINDAGKQIKLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   E+   + K  ++  ++  ++D L+ +    D++ SE      +   +
Sbjct: 205 VSEIGDKYKDLWNEEVEELFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +++  L  +  VYE                D    L  S  + D+ D+ L++SDG+YTY
Sbjct: 263 EEVLKLLKDRDVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F  D+AY   KY+RGF  +  + GSDH G++ R++A   A+       NV+L + V L R
Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D   ++MS RAG+F+TL  ++DEVG D+VR+       +  + FD    K +S +NPV+Y
Sbjct: 367 DDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508
           VQYA+AR  ++F  A+            + V  +E +      +  E  L+ +L  +  V
Sbjct: 427 VQYAHARIYNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTV 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P +L  YL  LA  FH  ++      +   V   N +L+  RL L  A   
Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529

Query: 569 IINSGLNIIGVESPNEM 585
           ++  GL +IGV +P  M
Sbjct: 530 VLRKGLKLIGVSAPERM 546


>gi|283782705|ref|YP_003373459.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441291|gb|ADB13757.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 598

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 187/596 (31%), Positives = 313/596 (52%), Gaps = 72/596 (12%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ + RP+D AHG  +TN AM L++  G+ P  +AEL   R++    +  V +AG GFI
Sbjct: 35  EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPRDLAELFAERLQEAEGIARVEVAGPGFI 94

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +    ++  ++  G  +G+N    G  +N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 95  NITLDSASAAAVVDEVLKQGAAFGKNTHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  +
Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208

Query: 210 GKEL---ADKYSSELLNFP------EEKWLPI----------VKDYSVQAMMKIIRDDLK 250
              +   A+    ++L+ P      +E+ LP+           +  +V  M   IR  ++
Sbjct: 209 ADSVIKEANADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  D++  E+  +  +   +   I +L  +G ++E      K   T           
Sbjct: 269 DFRVSFDVWFHENSLY--EDGEVERAIADLRERGDIFE------KDGAT----------W 310

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367
           F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+
Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370

Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            A+ AA  +K  + + +L+ +LV + +DG P++MSKRAG+ IT+  +VD +G D+ R+ +
Sbjct: 371 MAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485
                +  +D D   +   S +NPV+YVQYA+AR  ++ R A D     D  DL   N  
Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQDGADLSLLNT- 489

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540
                   ++ +++  LA++P  +  A   + P+++A YL DLA+ +H  ++  R     
Sbjct: 490 -------ETDGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542

Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
             +P  R  +A      +           RL+L  AV ++I +GL+++GV +P +M
Sbjct: 543 LTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM 598


>gi|7476032|pir||T09994 arginine-tRNA ligase (EC 6.1.1.19) - Mycobacterium leprae
 gi|699338|gb|AAA63099.1| argS [Mycobacterium leprae]
          Length = 687

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 194/593 (32%), Positives = 298/593 (50%), Gaps = 58/593 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + V +ERPR+  HG  S+N AM L + +G +PL 
Sbjct: 141 ADLAELLKTTAIVVLAERGLDAAALPQTVTVERPRNPEHGDYSSNLAMQLGKKVGANPLE 200

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +  V +AG GFIN+ L  S    I+++++ +   +G +    G ++
Sbjct: 201 LAGWLAEVLAQAGGIADVEVAGPGFINMRLDASAQAMIVNTVINADKNFGHSDDLAGYQI 260

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQ++    S+  
Sbjct: 261 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQVDRFTNSLIA 320

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +  L   D       Y G Y+  +  ++  + +   L+ PE +    V++  V  M  
Sbjct: 321 AAKGELTPADG------YAGTYVTDIAAQVMQQ-APYALSLPESEMHETVREIGVDLMFT 373

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H      + + I  L   G VYE               
Sbjct: 374 HIKKSLHEFGTDFDVYTHEDSMHA--SGRVDEAIARLRDTGNVYE--------------- 416

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                L  R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 417 -KDGALWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 475

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L  DG  ++MSKR+G+ ITL  +V+ +G D+ R
Sbjct: 476 IARLKAAAAAFGDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGVDAAR 535

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A       +F L P  
Sbjct: 536 YSLIRSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAA------EFGLIP-- 587

Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                   DT  L+L+ H         + E+P+V++ A   +EP+++  YL DLA  +H 
Sbjct: 588 --------DTGHLELLSHDKEGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHR 639

Query: 535 HWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P     Q + +   L   RL L  A   +I +GL I+GV +P  M
Sbjct: 640 FYDSCRVLP-----QGDEKPTDLHTARLALCQANRQVIANGLAILGVSAPERM 687


>gi|256833012|ref|YP_003161739.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686543|gb|ACV09436.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 558

 Score =  299 bits (765), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 187/561 (33%), Positives = 291/561 (51%), Gaps = 39/561 (6%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D I +ERPR   HG  +TN A+ L++  G  P  +A+ + AR++    +  V +AG GF+
Sbjct: 32  DMIHVERPRQRDHGDWATNVALQLAKKAGQPPRVLADALAARLQEQAGIARVDVAGPGFL 91

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +   ++  +IV +G EYGR+ +  G  +N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 92  NITLDTAAAGELARTIVEAGGEYGRSAVRAGRTINLEFVSANPTGPIHIGGTRWAAVGDS 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G  V +EYY ND GAQI+  A S+    Q         +PE  Y G Y+  +
Sbjct: 152 LARILQATGAHVVKEYYFNDHGAQIDRFARSLVASAQGL------PVPEDGYGGQYIHDI 205

Query: 210 GKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
            +++    ++E   +L           +   V+ M   I+  L    +  D++  E+  H
Sbjct: 206 AQQVLALAAAEGIDVLGLDPADTQEFFRARGVELMFGQIKQSLHDFGVDFDVYFHEN--H 263

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   I  L   G+++E                       R+T  GDD DR ++K
Sbjct: 264 LYESGEVDKAIAKLRDNGHIFE----------------QDGATWLRTTTFGDDKDRVVIK 307

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLL 385
           SDG   Y A D+AY+  K ERG D ++ ++G+DH GY+ RL AV AA  +     + VL+
Sbjct: 308 SDGDAAYIAGDIAYYLNKRERGSDEVVIMLGADHHGYIGRLMAVCAAFGDTPHTNLEVLI 367

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L +DG P++MSKRAG  +TL  +VD VG D+ R+ +      + +D D   + + 
Sbjct: 368 GQMVNLVKDGEPLRMSKRAGTVVTLEDLVDIVGVDAARYALARSSVDQSIDIDLDVLAKA 427

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI-PQESEFDTSELQLIVHLAE 504
           S +NPVFYVQYA+AR  ++ R A       D    P  +  P E+E       LI  L E
Sbjct: 428 SNDNPVFYVQYAHARTANVARNAAAAGVHRDDAFDPATLSHPTETE-------LIGRLTE 480

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YPR++E A   +E +++A Y   LA  +H  +S  R  P L   +  +   T  RL L  
Sbjct: 481 YPRIVEQAAQLREQHRVARYAEALAGAYHKWYSECRVTP-LSGAEVTDTHRT--RLWLND 537

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ + L+++GV +P  M
Sbjct: 538 ATGQVLRNALSLLGVSAPERM 558


>gi|121607568|ref|YP_995375.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121552208|gb|ABM56357.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 569

 Score =  299 bits (765), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 191/582 (32%), Positives = 296/582 (50%), Gaps = 65/582 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           +  +E P+  AHG  +  AA+ L++ L ++P  +AE + + +   P     V  + IAG 
Sbjct: 26  KAALESPKVAAHGDFACTAALQLAKTLHMNPRQMAEKLRSALLATPAFQRWVSDIDIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ L P+  + ++S ++ +G  +G      G +V +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFINIRLKPAARQAVVSEVLAAGAHFGCQPP-NGQRVLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199
           GD +  L A  G++V RE+Y NDAGAQI TLA S   R +      A +  D D P   G
Sbjct: 145 GDAICKLFATQGWQVHREFYYNDAGAQIQTLAHSTRLRAKGFKPGDACWPTDPDDPASRG 204

Query: 200 YYPGVYLKHVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           +Y G Y++ +  +        AD  S       ++  L  ++ ++V  +      DL+A 
Sbjct: 205 FYNGDYIQDIANDFLAQKTVQADDRSFTASGDVDD--LESIRQFAVAYLRNEQDKDLRAF 262

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           N+Q D +  E   +      +   ++ L   G  YE                    L  R
Sbjct: 263 NLQFDEYYLESSLYTS--GRVEAAVNRLIANGKTYE----------------RDGALWLR 304

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--V 370
           ST  GDD DR + K DGSYTYF  D+AY   K+ERG+  ++ V G+DH G + R+ A   
Sbjct: 305 STDYGDDKDRVMRKQDGSYTYFVPDVAYHIAKWERGYAKVVNVQGTDHHGTIARVRAGLQ 364

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           AA V       + +L  +VR+ + G  +K+SKRAG ++TLR +++    D+VRF +L RK
Sbjct: 365 AADVGIPPGYPDYVLHTMVRVVKGGQEVKISKRAGSYVTLRELIEWTSRDAVRFFLLSRK 424

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRN 483
                 FD      Q+ +NPV+YVQYA+AR  S+ R   D       +    D  L    
Sbjct: 425 PDTEYSFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWADQGGGDMAVLRAADLSLLD-- 482

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   D     L++ L +YP ++  AT +Q P+ ++FYL DLA+ +HG++   R   
Sbjct: 483 --------DPQAQALMLQLGKYPAMLTAATASQAPHDVSFYLRDLAASYHGYYDAQR--- 531

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   + ++   RL LV A A ++++GL ++GV +P  M
Sbjct: 532 ----ILVADERVKHARLALVSATAQVLHNGLAVLGVSAPARM 569


>gi|170698554|ref|ZP_02889624.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170136559|gb|EDT04817.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 593

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVTQVAHALKGADSAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++   G  +G +   
Sbjct: 67  QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  + ++      +A K    +    +   L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +      + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTS--PQAVSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|254251280|ref|ZP_04944598.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124893889|gb|EAY67769.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 593

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 311/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VPPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL L+ +  + ++ ++   G  +G +   
Sbjct: 67  QLAEQIVAAVNAHPAAQGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAQGSAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  + ++      +A K    +    +   L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYMNCETVAAKDGEPVKGAGDVDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + +  + + D    P   + Q +    +   L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNEWQSRY-NGDLAQLPHADLSQLTSAQAAS--LMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LANGLAMLGVSAPAKM 593


>gi|283768735|ref|ZP_06341646.1| arginine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104521|gb|EFC05894.1| arginine--tRNA ligase [Bulleidia extructa W1219]
          Length = 552

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 178/555 (32%), Positives = 297/555 (53%), Gaps = 32/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           +++E PRD + G  STN AM L++ L   P+ IAE +V  +K   P+  S+     GFIN
Sbjct: 29  LMVEEPRDRSKGDYSTNVAMRLAKVLHKAPIVIAEELVNDLKNTLPEASSIEFVKPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +    L +I++S++ +G +YG N  G G  + +E+VSANPTG +H GH R A  GD +
Sbjct: 89  FRIKREVLFEIINSVLKAGDKYGENTSGAGKNILVEWVSANPTGDLHCGHARNAAWGDCI 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++L+  SGY   RE+YINDAG QI+ L  S+  RY + L   D  LPE  Y    +K++ 
Sbjct: 149 SNLLEKSGYNCLREFYINDAGHQIDMLGESLVARYFEWL-GKDYPLPEDGYHAEDVKNIA 207

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE+ ++   + L    ++ L   K    +  +K I  DL    +    ++ E  F+  + 
Sbjct: 208 KEILEEEGDKWLETDPKERLEHFKLVGKKKELKKIERDLALYRVHFQSWMPESFFYENNM 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I  ++D + +    YE                    L F++T  GDD DR L KSDGS
Sbjct: 268 ERINAVLDKMDKMNLTYE----------------KDGALWFKATEYGDDKDRVLRKSDGS 311

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            +Y   D+A    K ERG+++++ + G+DH  YV R++    A+   +  ++V + ++VR
Sbjct: 312 LSYLTPDIANHVYKVERGYEHLVNLWGADHHSYVTRMKLALKALGYPEGTLDVDIIQMVR 371

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +  DG  +KMSKR G+ ITLR + ++VG D+ R+  + +  +  +DFDF   +++   NP
Sbjct: 372 MVEDGQEVKMSKRTGNAITLRELCEDVGVDAARWFFVAKDVASHMDFDFNLARKKDNNNP 431

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y QYAY R  SI R+ +D+      D F R         +  EL L+  ++E+P+++ 
Sbjct: 432 VYYCQYAYTRMSSILRK-EDLPAFKPTDDFSRLT-------NEKELYLMKLMSEFPKLVA 483

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   ++P K+  Y+ DLA  +H ++   + N        ++ +LT  R+ L+ A+   +
Sbjct: 484 DAARLRKPNKVTEYILDLAKTYHSYYGMAKVN------NLDDPELTNQRIGLLKALQITL 537

Query: 571 NSGLNIIGVESPNEM 585
            +   ++GVE+  +M
Sbjct: 538 KNAFALVGVEALEQM 552


>gi|107023852|ref|YP_622179.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690937|ref|YP_836560.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170734267|ref|YP_001766214.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254247060|ref|ZP_04940381.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184]
 gi|123071911|sp|Q1BT49|SYR_BURCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232763|sp|A0KAZ0|SYR_BURCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238688616|sp|B1JZC6|SYR_BURCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|105894041|gb|ABF77206.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116649026|gb|ABK09667.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124871836|gb|EAY63552.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184]
 gi|169817509|gb|ACA92092.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 593

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL LS +  + +++++   G  +G +   
Sbjct: 67  QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +    +   L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTSAQAAS--LMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|218960696|ref|YP_001740471.1| Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729353|emb|CAO80264.1| Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 549

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 183/579 (31%), Positives = 309/579 (53%), Gaps = 42/579 (7%)

Query: 12  KNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           KN ++ +D  K+  EK+      +E P +   G  STNAA++L +   + P  +A+ IV 
Sbjct: 8   KNIVEALDNLKLNHEKEF----TVEIPNNPEFGDYSTNAALVLGKENKMKPKDLADKIVK 63

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +K +     + IAG GFIN +LSPS  +++   I  S  +YG++  G   K+ +EFVSA
Sbjct: 64  ELKKNKAYKKLEIAGPGFINFFLSPSLYQQVFWEIYKSE-DYGKSDFGNQEKILLEFVSA 122

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+++   R A  GDTL  +M + GY   RE+YINDAG Q++ LA S+  R ++   
Sbjct: 123 NPTGPLNIVSARAAAFGDTLYRIMKYVGYAPAREFYINDAGNQVDILAESLELRLREIHG 182

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
               + P   Y G Y+KH+   L     + +   PE+  L  +K++++  ++++ R+ L+
Sbjct: 183 EKIGEFPYEAYHGEYVKHLAHRLNALEGTRVFMLPEKDRLEHLKEFALSELLEMQRNSLE 242

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK-CDMDRKQ- 308
              +  + ++SE                         EG++    S  T+  C  +++  
Sbjct: 243 KFGVVFEGWVSEKALRA--------------------EGVVEEVLSYLTEADCTYEKEDA 282

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F ST  GDD DR L+KSDGS TYF  D+AY   K +RGF  +I + G DH GYV R+ 
Sbjct: 283 IWFNSTKYGDDKDRVLMKSDGSITYFVPDVAYHLTKIQRGFTKLIDIFGPDHHGYVPRIR 342

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A++   + +  +  + V ++  G  +KMSKRAG  +T+  ++  VG D+ R+  + 
Sbjct: 343 AAFRALNYDDSILEFIFLQQVNIFESGERVKMSKRAGKIVTMDDLISVVGKDAARYFFIA 402

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIP 486
           RK +  L+FD     +++ ENPV+Y QYA+AR  SI ++A+   I+P      F + +I 
Sbjct: 403 RKANAHLNFDLELALKKNNENPVYYCQYAHARICSIIKKARSEKIYP----KHFKKEMIK 458

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           + ++    EL LI  +A+ P ++    + +EP++L  Y+ +LAS+ H ++       + +
Sbjct: 459 KLNK--PEELALIQKMADLPELLILIAVHREPHRLTTYIEELASLLHHYYE------KYQ 510

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N  L+  RL L++ V  ++     ++G+ +P  M
Sbjct: 511 IVNVKNLALSQARLMLLYTVRKVMQICFELMGISAPETM 549


>gi|186474957|ref|YP_001856427.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691324|sp|B2JKJ2|SYR_BURP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|184191416|gb|ACC69381.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 594

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 193/611 (31%), Positives = 313/611 (51%), Gaps = 65/611 (10%)

Query: 11  LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L + +K++    + E +   I   I +ERP+  AHG ++ N AM L++P+  +P  +A+ 
Sbjct: 13  LTDVVKQVAQATQGESEAAFIAPAITLERPKVAAHGDVACNVAMQLAKPMRANPRQLAQQ 72

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IV  +  DP     VD   +AG GFINL LS +  + +++++      +GR+    G +V
Sbjct: 73  IVDALLADPLAKGLVDGAEVAGPGFINLRLSAASKQAVIAAVFAQREAFGRSQREAGKRV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD +++++A  G++V RE+Y NDAG QI  LA+S   
Sbjct: 133 LVEFVSANPTGPLHVGHGRQAALGDAMSNVLASQGFDVHREFYYNDAGVQIGNLAISTQA 192

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237
           R  + L   D   PE  Y G Y+  +      G+ ++      +    + + L  ++ ++
Sbjct: 193 R-ARGLKPGDPGWPEAAYNGEYIADIARDYLNGETVSASDGEPVKGAGDVEDLEAIRRFA 251

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   ++     +   ++ L   G  YE         
Sbjct: 252 VAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVNELIAAGKTYE--------- 300

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDG+YTYF  D+AY + K+ERGF  +I + G
Sbjct: 301 -------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHETKWERGFTKVINIQG 353

Query: 358 SDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+R +++
Sbjct: 354 SDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                  G D+VRF ++ RK      FD     +Q+ ENPV+YV
Sbjct: 414 WSGGAVPGQEAAPDLLDEETIRRGRDAVRFFLISRKADTEFVFDVDLALKQNDENPVYYV 473

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+  + K  +   +  L   ++ P +SE  T+ LQ    LAE+P ++ +A  
Sbjct: 474 QYAHARICSVINEWKSRYGADETGLPVVDLSPLDSERATALLQ---KLAEFPDMLTHAAG 530

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +AFYL DLA  FH  ++  R       V  ++      R+ L+ A   ++ +GL
Sbjct: 531 ELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRNARIALLAATRQVLANGL 583

Query: 575 NIIGVESPNEM 585
            +IGV +P +M
Sbjct: 584 AVIGVSAPAKM 594


>gi|149927068|ref|ZP_01915326.1| arginyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824289|gb|EDM83509.1| arginyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 579

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 196/588 (33%), Positives = 301/588 (51%), Gaps = 71/588 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           + +E+P+D +HG ++ N AM L++P   +P  +A+L+   +K +P     VD+V IAG G
Sbjct: 29  VTLEKPKDASHGDVACNLAMQLAKPAKRNPRELAQLLADHVKANPACVSLVDAVDIAGPG 88

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+ LS +    +++ ++  G E+G++    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 89  FINIRLSQNARVAVVAQVLEQGTEFGKSGAHAGETVLIEFVSANPTGPLHVGHGRQAALG 148

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +A++M   G++V +E+Y NDAG QI TLA SV  R  + L   D + PE  Y G Y+ 
Sbjct: 149 DAMAAVMQTQGWKVHKEFYYNDAGVQIQTLATSVQAR-AKGLKPGDVEWPESAYNGDYIA 207

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFI 260
            +      GKE+       +           ++ ++V A ++  +D DLKA  +  D F 
Sbjct: 208 DIAEDFLAGKEVKAADGEPVKGTGNVDDFECIRAFAV-AYLRAEQDLDLKAFGVNFDQFY 266

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E   +      +   +  +   G  +E                +   L  RST  GDD 
Sbjct: 267 LESSLY--SEGKVEAAVALMVASGKTFE----------------EGGALWLRSTDYGDDK 308

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKK 378
           DR + KS+G YTYF  D+AY   K++RGF  +I + G+DH G + R+ A   A  V   +
Sbjct: 309 DRVMRKSEGGYTYFVPDVAYHIQKFKRGFGKVINIQGTDHHGTIARVRAGLQACNVGIPQ 368

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV------VDEV------------GSD 420
              + +L ++V + + G  +K+SKRAG ++T+R +      VDE             G D
Sbjct: 369 GYPDYVLHKMVTVMKGGQEVKISKRAGSYVTVRDLICWSGGVDETQPMLSQPEALTKGRD 428

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDF 477
           +VRF ++ RK      FD      QS ENPV+YVQYA+AR  SI  QA+         D 
Sbjct: 429 AVRFFLVSRKADTEFVFDVDLALAQSDENPVYYVQYAHARIHSILDQAEVDLSTIHGADL 488

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L              SEL L+  L  YP ++  A     P+ +AFYL +LA  FH  ++
Sbjct: 489 TLLAA----------PSELALLRTLVSYPDILSKAAEELAPHHIAFYLRELAGAFHTFYN 538

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R       V+ ++  L   R+ L+ AVA+++++GL ++GV +P  M
Sbjct: 539 AER-------VRIDDMALKTARVGLLVAVATVLSNGLAVLGVSAPKRM 579


>gi|183602799|ref|ZP_02964162.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241191434|ref|YP_002968828.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196840|ref|YP_002970395.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218037|gb|EDT88685.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249826|gb|ACS46766.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251394|gb|ACS48333.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295794427|gb|ADG33962.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 590

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 187/597 (31%), Positives = 307/597 (51%), Gaps = 76/597 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P  +A+L    +     + +V +AG GFIN
Sbjct: 28  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFADALNGTDGIAAVEVAGPGFIN 87

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++  ++  G  +G+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 88  ITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G  V REYY ND G QIN  A S+          +D   P   Y G Y+  + 
Sbjct: 148 ARILQANGATVVREYYFNDHGEQINRFAKSLV------AAAHDEPTPVDGYKGAYIDEIA 201

Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           + +   A+    ++LN P      +EK  P+ +  S Q           M   IR  +K 
Sbjct: 202 RRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQREEFRKRAVPMMFDEIRQSMKE 261

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +  +   +   I +L   G +YE      K   T           F
Sbjct: 262 FRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE------KDGAT----------WF 303

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R+ 
Sbjct: 304 ESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDPADVAIYMLGADHHGYIGRMM 363

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA  +K  + + +L+ ++V + +DG P++MSKRAG+ +T+  ++D +G D+ R+ + 
Sbjct: 364 AMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNIVTIDDLIDAIGVDASRYSLA 423

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484
               +  +D D   +   S +NPV+YVQYA+AR  ++ R A+       D D  L     
Sbjct: 424 RTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRNAEAAQINAADADLSLL---- 479

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP- 543
              ++E D    ++I  LA++P ++  A   + P+++A YL DLA+ +H  ++  R  P 
Sbjct: 480 ---DTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLEDLAAAYHKWYNVERVVPM 533

Query: 544 ---------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                          R R  +         RL+L  AV ++I  GL+++GV +P++M
Sbjct: 534 PLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIAEGLDLLGVTAPDKM 590


>gi|297243030|ref|ZP_06926968.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889241|gb|EFH27975.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 598

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 188/596 (31%), Positives = 313/596 (52%), Gaps = 72/596 (12%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ + RP+D AHG  +TN AM L++  G+ P  +AEL    ++    + SV +AG GFI
Sbjct: 35  EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPSDLAELFAESLQEAEGIASVEVAGPGFI 94

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +    ++  ++  G ++G+N    G  +N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 95  NITLDSASAAAVVDEVLKQGADFGKNTHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  +
Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208

Query: 210 GKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250
              +   A     ++L+ P      +E+ LP+ +  S Q           M   IR  ++
Sbjct: 209 ADAVIKEAQADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  D++  E+  +  +   +   I +L  +G ++E      K   T           
Sbjct: 269 DFRVDFDVWFHENSLY--EDGEVERAIADLRSRGDIFE------KDGAT----------W 310

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367
           F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+
Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370

Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            A+ AA  +K  + + +L+ +LV + +DG P++MSKRAG+ IT+  +VD +G D+ R+ +
Sbjct: 371 MAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485
                +  +D D   +   S +NPV+YVQYA+AR  ++ R A D     D  DL   N  
Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQDGADLSLLNT- 489

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540
                   ++ +++  LA++P  +  A   + P+++A YL DLA+ +H  ++  R     
Sbjct: 490 -------EADGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542

Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
             +P  R  +A      +           RL+L  AV ++I +GL+++GV +P +M
Sbjct: 543 LTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM 598


>gi|219683104|ref|YP_002469487.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782942|sp|B8DWR0|SYR_BIFA0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219620754|gb|ACL28911.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|289177559|gb|ADC84805.1| Arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 598

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 187/597 (31%), Positives = 307/597 (51%), Gaps = 76/597 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P  +A+L    +     + +V +AG GFIN
Sbjct: 36  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFADALNGTDGIAAVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++  ++  G  +G+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 96  ITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G  V REYY ND G QIN  A S+          +D   P   Y G Y+  + 
Sbjct: 156 ARILQANGATVVREYYFNDHGEQINRFAKSLV------AAAHDEPTPVDGYKGAYIDEIA 209

Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           + +   A+    ++LN P      +EK  P+ +  S Q           M   IR  +K 
Sbjct: 210 RRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQREEFRKRAVPMMFDEIRQSMKE 269

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +  +   +   I +L   G +YE      K   T           F
Sbjct: 270 FRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE------KDGAT----------WF 311

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R+ 
Sbjct: 312 ESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDPADVAIYMLGADHHGYIGRMM 371

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA  +K  + + +L+ ++V + +DG P++MSKRAG+ +T+  ++D +G D+ R+ + 
Sbjct: 372 AMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNIVTIDDLIDAIGVDASRYSLA 431

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484
               +  +D D   +   S +NPV+YVQYA+AR  ++ R A+       D D  L     
Sbjct: 432 RTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRNAEAAQINAADADLSLL---- 487

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP- 543
              ++E D    ++I  LA++P ++  A   + P+++A YL DLA+ +H  ++  R  P 
Sbjct: 488 ---DTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLEDLAAAYHKWYNVERVVPM 541

Query: 544 ---------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                          R R  +         RL+L  AV ++I  GL+++GV +P++M
Sbjct: 542 PLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIAEGLDLLGVTAPDKM 598


>gi|152980236|ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166232796|sp|A6SU56|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151280313|gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 202/582 (34%), Positives = 302/582 (51%), Gaps = 62/582 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERPRD +HG ++ N AM +++PL  +P  +A+ + A +  +P     +++  IAG G
Sbjct: 30  ITLERPRDPSHGDVACNLAMQIAKPLKKNPREVAQALAAALLDNPANRDLIEAADIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + ++ +++  G E+G++ +G   KV IEFVSANPTGP+HVGH R   +G
Sbjct: 90  FINLRLTAASRQAVVKTVLQQGAEFGKSNLGNDKKVIIEFVSANPTGPLHVGHGRQGALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D ++SL    GY+VTRE+Y NDAG QI TLA SV  R  + L       PE  Y G Y++
Sbjct: 150 DAMSSLFQAQGYDVTREFYYNDAGVQIATLATSVQAR-GKGLKPGVEGWPESAYNGDYIQ 208

Query: 208 HVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +  + LA K  S     P      I     ++ +SV  + +    DL+A  ++ D +  
Sbjct: 209 DIANDFLAKKTVSASNGEPVTASGDINDIESIRQFSVTYLRREQDLDLQAFGVKFDNYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   +D L +    YE               +D   L  R+T   DD D
Sbjct: 269 ESSLYA--DGKVEKTVDALIKADKTYE---------------LD-GALWLRTTDYRDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDG+YTYF  D+AY   K++RGF   I V GSDH G + R+ A   A  +   + 
Sbjct: 311 RVMKKSDGTYTYFVPDVAYHTVKWQRGFTQAINVQGSDHHGTIARVRAGLQALDIGIPQG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----EV----------GSDSVRFM 425
             + +L ++V + R+G  +K+SKRAG ++TLR +++    EV          G D+VRF 
Sbjct: 371 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSNGEVVDGEVRDLTRGRDAVRFF 430

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLD-FDLFPRN 483
           ++ RK      FD      Q  ENPV+YVQYA+AR  S+  Q  D     LD  DL P  
Sbjct: 431 LISRKADTEFVFDVDIALTQGDENPVYYVQYAHARICSVLAQWTDGDEASLDKVDLSPLT 490

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E  L+  LAEYP  ++ A     P+++AFYL DLA   H +++  R   
Sbjct: 491 A--------ARETALLAKLAEYPETLQKALEELGPHQVAFYLRDLAGELHSYYNAER--- 539

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V  ++  L M R+ L+ A   ++ +GL +IGV +P  M
Sbjct: 540 ----VLVDDEALKMARIALMSATRQVLRNGLALIGVSAPARM 577


>gi|308235657|ref|ZP_07666394.1| arginyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311115202|ref|YP_003986423.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946696|gb|ADP39400.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 598

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 187/596 (31%), Positives = 314/596 (52%), Gaps = 72/596 (12%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ + RP+D AHG  +TN AM L++  G+ P  +AEL   R++    +  V +AG GFI
Sbjct: 35  EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPHDLAELFAERLQEAQGIARVEVAGPGFI 94

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L  +    ++  ++  G ++G+N    G  +N+EFVSANPTGP+H+G  R A VGD+
Sbjct: 95  NITLDSASAAAVVDEVLKQGADFGKNEHLGGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  +
Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208

Query: 210 GKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250
              +   A     ++L+ P      +E+ LP+ +  S Q           M   IR  ++
Sbjct: 209 ADAVIKEAQADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  D++  E+  +  +   +   I +L  +G ++E      K   T           
Sbjct: 269 DFRVGFDVWFHENSLY--EDGEVERAIADLRERGDIFE------KDGAT----------W 310

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367
           F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+
Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370

Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            A+ AA  ++  + + +L+ ++V + +DG P++MSKRAG+ IT+  +VD +G D+ R+ +
Sbjct: 371 MAMCAAFGDEPGENMQILIGQMVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485
                +  +D D   +   S +NPV+YVQYA+AR  ++ R A D     D  DL   N  
Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGISADGADLSLLNT- 489

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540
                   ++ +++  LA++P  +  A   + P+++A YL DLA+ +H  ++  R     
Sbjct: 490 -------EADGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542

Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
             +P  R  +A      +           RL+L  AV ++I SGL+++GV +P++M
Sbjct: 543 LSDPENRLPEAEREAQRIAKCPEPARAAARLKLNEAVRTVIASGLDLLGVSAPDKM 598


>gi|195952792|ref|YP_002121082.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932404|gb|ACG57104.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 539

 Score =  297 bits (761), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 195/559 (34%), Positives = 297/559 (53%), Gaps = 51/559 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I+ P++ ++G+ ++N A ILS+ L   P  IA  I   +K  P  + V  A  GF+N+ L
Sbjct: 25  IQLPKEESYGNFASNIAFILSKALKQKPQDIAITIADNLKNLPHFEKV-EALNGFVNMKL 83

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           S  +   +L   + + I Y ++        I K  K+N+E+VSANPTGP+H+GH R AV+
Sbjct: 84  SSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKINLEYVSANPTGPLHLGHGRGAVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD L  L  F   +V REYYINDAG Q+N LA SV     Q LY      PE  Y G Y+
Sbjct: 144 GDVLYRLFRFFDIKVDREYYINDAGNQVNLLAKSVMHYINQDLY----PFPEDGYKGDYI 199

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K + +    +++   +N   E  L  VKD+++  MM+ I++ LK LN++ DI+ SE    
Sbjct: 200 KDIAEAFLKEHNKSNINL--EINLERVKDFAISKMMEDIKNTLKLLNVEFDIYFSE---- 253

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 ++D +          E +L   K K     +     + F+S    +D DR L K
Sbjct: 254 ----KTLKDKV----------EKVLELLKEKNL--IEEKEGAIWFKSK--DEDKDRVLRK 295

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           SDGSYTYFA+D+AY   KY+RG+   I + G+DH GY+ RL+A   A+   +  ++V L 
Sbjct: 296 SDGSYTYFASDIAYHLDKYQRGYKKAIDLWGADHHGYIPRLKAALEALDIPQDWLSVELF 355

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++V+L+ +G  ++MSKR G  + L  V++++G+D++RFM L +K    LD D   VK Q+
Sbjct: 356 QIVKLFENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKADTPLDIDINLVKAQN 415

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            ENPVFYVQYAYAR   I RQ K+ F    F  +      +E E D     LI  +    
Sbjct: 416 SENPVFYVQYAYARTMGIKRQLKEPFV---FGFYKDKYTYEEEELD-----LIKRILSSK 467

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+    I ++P  +     D+A  FH  ++  +       V  ++   T  R+ LV+A 
Sbjct: 468 DVLFEGVIKKDPSLVVKLSLDIAKSFHKFYNTHK-------VITSDEITTKKRISLVYAT 520

Query: 567 ASIINSGLNIIGVESPNEM 585
             I +   +I+ +++P  M
Sbjct: 521 QKIFDIIFDILSIKAPEMM 539


>gi|281413077|ref|YP_003347156.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374180|gb|ADA67742.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 546

 Score =  297 bits (761), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 187/557 (33%), Positives = 288/557 (51%), Gaps = 41/557 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P     G LSTN AM L++ L  +P  IA+ IV  +  DP  D + I G GFIN +L
Sbjct: 26  VEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAKEIVKSLDEDPSFDRIEIMGPGFINFFL 85

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S   LR ++ +++    EYGR  +G G KV  E+ SANPTGP  VGH R  ++GD L+ +
Sbjct: 86  SNELLRGVVKTVLEKKDEYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+VTRE YINDAG QI  LA S++ RY Q L   + ++PEG Y G YL  + ++L
Sbjct: 146 YKELGYDVTREMYINDAGKQIRLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++      +   E+     K  ++  ++  ++D L+ +    D++ SE      +   +
Sbjct: 205 VNEIGDRYKDLWNEEVEEFFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +++  L  +  VYE                D    L  S  + D+ D+ L++SDG+YTY
Sbjct: 263 EEVLKLLKDRNVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F  D+AY   KY+RGF  +  + GSDH G++ R++A   A+       NV+L + V L R
Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D   ++MS RAG+F+TL  ++DEVG D+VR+       +  + FD    K +S +NPV+Y
Sbjct: 367 DDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508
           VQYA+AR  ++F  A+            + V  +E +      +  E  L+ +L  +  V
Sbjct: 427 VQYAHARIYNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTV 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P +L  YL  LA  FH  ++      +   V   N +L+  RL L  A   
Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529

Query: 569 IINSGLNIIGVESPNEM 585
           ++  GL +IGV +P  M
Sbjct: 530 VLRKGLKLIGVSAPERM 546


>gi|157738329|ref|YP_001491013.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980179|sp|A8EWM0|SYR_ARCB4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157700183|gb|ABV68343.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 529

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 308/578 (53%), Gaps = 52/578 (8%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++N +KE      +EK +   IV+E+P+D + GH +T  A  L++ L   P+ IA+ +V 
Sbjct: 1   MQNLVKEF-----IEKVLETNIVLEKPKDVSLGHYATPVAFSLAKELKKSPMLIAQELVT 55

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           +++ +P +     A  GFIN  LSP +L+ ++   + +   + +    K  K+ +E+VSA
Sbjct: 56  KLE-NPSLFEKIEAVNGFINFKLSPLFLQSLVDDALSNKENFAKQH-KKSEKILLEYVSA 113

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+GH R A+ GD+LA +  + GY++T EYYINDAG+Q++ L LSV    +  +Y
Sbjct: 114 NPTGPLHIGHARGAIFGDSLARVGKYLGYDITTEYYINDAGSQMDLLGLSVNLAARDFIY 173

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQAMMKIIRD 247
             D   PE YY G YL  +  ++   Y  + L + E+ +  I    KD+    +M +I  
Sbjct: 174 GEDVSYPEVYYRGDYLIDIANQIIQDYGKDYL-YDEKNFKDIALLGKDF----VMNLIIK 228

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DLK L I+ D F+SE   +       R + +N    G +Y               D D K
Sbjct: 229 DLKDLGIEFDNFVSEKSLYSSWNETKRVLEEN----GSLY---------------DKDDK 269

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
             L +ST  GDD DR +++ +G  TY A D+ Y K KY+R FD  I + G+DH GY+ R+
Sbjct: 270 TYL-KSTQYGDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRNFDRYINIWGADHHGYITRV 328

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +A    +    +++ VLL ++V+L + G P KMSKR G+ I +  + +E+GSD++RF+ L
Sbjct: 329 KAAIEFLGNDSSKLEVLLSQMVQLLKGGEPYKMSKRKGNVILMSEITEEIGSDALRFIFL 388

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +K+   L+FD   +K Q   NP+FY+ YA+AR   +F +A   F D+    F +     
Sbjct: 389 TKKSDTHLEFDIDTLKNQDSSNPIFYINYAHARINQVFVKAGVNFDDIKDISFEK----- 443

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +   L L+        ++  A   ++  K+  YLY+LAS  H  ++        + 
Sbjct: 444 ---LNQDGLNLVYESLLLESILVEAFAKRDMQKITEYLYNLASSIHKFYNEH------KI 494

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++ + L    L+++   A  I  GL ++G+E+   M
Sbjct: 495 IGSDEQNL---YLKVLSIAALSIKVGLKLLGIEAKEIM 529


>gi|170289501|ref|YP_001739739.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688807|sp|B1L826|SYR_THESQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170177004|gb|ACB10056.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 546

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 186/557 (33%), Positives = 286/557 (51%), Gaps = 41/557 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P     G LSTN AM L++ L  +P  IA+ IV  +  DP  D + I G GFIN +L
Sbjct: 26  VEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAKEIVKSLDEDPSFDRIEIMGPGFINFFL 85

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S   LR ++ +++    EYGR  +G G KV  E+ SANPTGP  VGH R  ++GD L+ +
Sbjct: 86  SNELLRGVVKTVLEKKDEYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+VTRE YINDAG QI  LA S++ RY Q L   + ++PEG Y G YL  + ++L
Sbjct: 146 YKELGYDVTREMYINDAGKQIRLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++      +   E+     K  ++  M+  ++D L+ +    D++ SE      +   +
Sbjct: 205 VNEIGDRYKDLWNEEVEEFFKQTALNRMLSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +++  L  +  VYE                D    L  S  + D+ D+ L++SDG+YTY
Sbjct: 263 EEVLKLLKNKDVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F  D+AY   KY+RGF  +  + GSDH G++ R++A   A+       NV+L + V L R
Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
            G  ++MS RAG+F+TL  ++DEVG D+ R+       +  + FD    K +S +NPV+Y
Sbjct: 367 GGEIVRMSTRAGEFVTLDELLDEVGRDATRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508
           VQYA+AR  ++F  A+            + V  +E +      +  E  L+ +L  +   
Sbjct: 427 VQYAHARIHNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTA 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P +L  YL  LA  FH  ++      +   V   N +L+  RL L  A   
Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529

Query: 569 IINSGLNIIGVESPNEM 585
           ++  GL +IGV +P  M
Sbjct: 530 VLRKGLKLIGVSAPERM 546


>gi|206559077|ref|YP_002229837.1| arginyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693086|sp|B4E9M9|SYR_BURCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|198035114|emb|CAR50988.1| putative arginyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 593

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL LS +  + +++++   G  +G +   
Sbjct: 67  QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +    +   L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTSAQATS--LMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDAAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAMLGVSAPAKM 593


>gi|315636616|ref|ZP_07891850.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479125|gb|EFU69824.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 529

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 308/578 (53%), Gaps = 52/578 (8%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++N +KE      +EK +   IV+E+P+D + GH +T  A  L++ L   P+ IA+ +V 
Sbjct: 1   MQNLVKEF-----IEKVLETNIVLEKPKDVSLGHYATPVAFSLAKELKKSPMLIAQELVT 55

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           +++ +P +     A  GFIN  LSP +L+ ++   + +   + +    K  K+ +E+VSA
Sbjct: 56  KLE-NPSLFEKIEAVNGFINFKLSPLFLQSLVDDALSNKENFAKQH-KKSEKILLEYVSA 113

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+GH R A+ GD+LA +  + GY++T EYYINDAG+Q++ L LSV    +  +Y
Sbjct: 114 NPTGPLHIGHARGAIFGDSLARVGKYLGYDITTEYYINDAGSQMDLLGLSVNLAARDFIY 173

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQAMMKIIRD 247
             D   PE YY G YL  +  ++   Y  + L + E+ +  I    KD+    +M +I  
Sbjct: 174 GEDVSYPEVYYRGDYLIDIANQIIQDYGKDYL-YDEKNFKDIALLGKDF----VMNLIIK 228

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DLK L I+ D F+SE   +       R + +N    G +Y               D D K
Sbjct: 229 DLKDLGIEFDNFVSEKSLYSSWNETKRVLEEN----GSLY---------------DKDDK 269

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
             L +ST  GDD DR +++ +G  TY A D+ Y K KY+R FD  I + G+DH GY+ R+
Sbjct: 270 TYL-KSTQYGDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRSFDRYINIWGADHHGYITRV 328

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +A    +    +++ VLL ++V+L + G P KMSKR G+ I +  + +E+GSD++RF+ L
Sbjct: 329 KAAIEFLGNDSSKLEVLLSQMVQLLKGGEPYKMSKRKGNVILMSEITEEIGSDALRFIFL 388

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +K+   L+FD   +K Q   NP+FY+ YA+AR   +F +A   F D+    F +     
Sbjct: 389 TKKSDTHLEFDIDTLKNQDSSNPIFYINYAHARINQVFVKAGVNFDDIKDISFEK----- 443

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +   L L+        ++  A   ++  K+  YLY+LAS  H  ++        + 
Sbjct: 444 ---LNQDGLNLVYESLLLESILVEAFAKRDMQKITEYLYNLASSIHKFYNEH------KI 494

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++ + L    L+++   A  I  GL ++G+E+   M
Sbjct: 495 IGSDEQNL---YLKVLSIAALSIKVGLKLLGIEAKEIM 529


>gi|91790322|ref|YP_551274.1| arginyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|122967265|sp|Q123B6|SYR_POLSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91699547|gb|ABE46376.1| arginyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 561

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 188/569 (33%), Positives = 294/569 (51%), Gaps = 51/569 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGF 88
           V E P+  AHG  ++ AAM L++PL L+P  +AE +   +   P     VD++ IAG GF
Sbjct: 28  VFESPKVAAHGDFASTAAMQLAKPLKLNPRQVAENLRGLLLQAPAFARWVDAIEIAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+ L P   ++++  ++    +YG  L     ++ +EFVSANPTGP+HVGH R A +GD
Sbjct: 88  LNIRLKPEAKQQVVREVLQGADQYGMQLADSPHRMVVEFVSANPTGPLHVGHGRQAALGD 147

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            + +L    G++V RE+Y NDAG QI TLA S   R  + L   D+  PE  Y G Y+  
Sbjct: 148 AICNLFDTQGWDVWREFYYNDAGVQIQTLATSTQAR-AKGLKPGDAGWPEPAYNGDYIAD 206

Query: 209 VGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +  +   K +      E     + + +  ++ ++V  +      DL+A +++ D +  E 
Sbjct: 207 IANDFLAKKTVKSDDREFTASGDVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNYYLES 266

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +      +   +  L   G  YE                    L  +ST  GDD DR 
Sbjct: 267 SLYSS--GRVDSAVQKLKDAGKTYE----------------QDGALWLKSTDYGDDKDRV 308

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381
           + K DGSYTYF  D+AY   K+ERGF   I + G DH G + R+ A   AA+    +   
Sbjct: 309 MKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQGMDHHGTIARVRAGLQAASAGIPQGYP 368

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           + +L  +VR+ R G  +K+SKRAG ++TLR +++   +D+VRF +L RK      FD   
Sbjct: 369 DYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLIEWTSADAVRFFLLSRKPDTEYVFDIDL 428

Query: 442 VKEQSKENPVFYVQYAYARCRSIF----RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
              ++ ENPV+YVQYA+AR  SI      Q  D       DL         S  D  + Q
Sbjct: 429 ALAKNNENPVYYVQYAHARICSILGTWAAQGGDASQLKSVDL---------SALDGPQAQ 479

Query: 498 -LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ LA+YP ++ NA     P+ +AFYL +LA+ +H ++   R       +  ++  + 
Sbjct: 480 ALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHSYYDAER-------ILVDDEAIK 532

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + RL LV A A ++++GL ++GV +P++M
Sbjct: 533 LARLALVAATAQVLHNGLKVLGVSAPHKM 561


>gi|291544037|emb|CBL17146.1| arginyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 562

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 181/505 (35%), Positives = 281/505 (55%), Gaps = 31/505 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLY 92
           IE P D +HG  +TNAAM+ ++P  + P  IAE I+  + ++    D   IAG GFIN +
Sbjct: 39  IEIPADKSHGDFATNAAMVCAKPFRMAPRAIAEKILGELVLEGTYFDRAEIAGPGFINFF 98

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LSP +  +++++++     YGR   G+G +V +EFVSANPTGPMHVG+ R   +GD LAS
Sbjct: 99  LSPRWFAQVVNTVLEETGTYGRTDTGEGKRVLVEFVSANPTGPMHVGNARGGAIGDCLAS 158

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+ ++GY+V RE+YINDAG QI   A S+  RY Q LY +  +LPE  Y G+ +    K 
Sbjct: 159 LLDWAGYQVEREFYINDAGNQIEKFATSLEVRYLQ-LYRDGVELPEDAYQGMDIVEHAKA 217

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            A +     ++   +     +  Y++   ++ ++ DL    IQ+D +  E   H  D S 
Sbjct: 218 FAAENGDRYVDADAKTRRDALVAYALPKNIEGLKRDLGKYRIQYDTWFRESTLH-ADGS- 275

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + +I+  L   GY YE                      F++T  G D D  L++S+G  T
Sbjct: 276 VMEIVRKLRDSGYTYE----------------QDGATWFKATEFGADKDFVLVRSNGIPT 319

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   D+AY   K   RGFD  I V+G+DH GYV RL+A   A+    ++++V+L ++V +
Sbjct: 320 YVVPDIAYHYNKLVTRGFDKAIDVLGADHHGYVPRLKAALTALGVDASKLDVVLMQMVFV 379

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            R+G   K+SKR+G  ITL  +++E+  D+ RF    R+ +   +FD     E+S +NPV
Sbjct: 380 MRNGQVAKLSKRSGKAITLVTLLEEIPIDAARFFFNLREANSHFEFDLDLAVEKSSQNPV 439

Query: 452 FYVQYAYARCRSIFRQAKD--IFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +YVQYA+AR  S+ R   +  I P +L  +L  +   PQ       E++LI ++A  P+ 
Sbjct: 440 YYVQYAHARICSLLRNLAEEGIQPTELTGELMQQFTQPQ-------EIELIRYIAMLPQE 492

Query: 509 IENATIAQEPYKLAFYLYDLASVFH 533
           I+ A    +P ++  Y  +LA++FH
Sbjct: 493 IDTAAKHYDPSRITKYTVELATLFH 517


>gi|268609113|ref|ZP_06142840.1| arginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 588

 Score =  296 bits (759), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 183/585 (31%), Positives = 296/585 (50%), Gaps = 66/585 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINL 91
            IE P D +HG  + N AM+ ++   + P  IAELI  +++++  + +   +AG GF+N 
Sbjct: 38  TIEIPADKSHGDFAANTAMVCAKAFKMPPRKIAELITEKVQMEGTMFEKTEVAGPGFMNF 97

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L   +  +++ +++  G  YG+   G G +  +EFVSANPTGPMH+G+ R   +GD LA
Sbjct: 98  FLGRKWFSQVVENVLEEGENYGKTDTGAGKRALVEFVSANPTGPMHIGNARGGAIGDCLA 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-------QALYNNDSD--------- 195
           S++ ++G+   RE+Y+NDAG QI     S+  RY        Q +Y + +D         
Sbjct: 158 SVLQWAGWHAEREFYVNDAGNQIEKFGKSLSLRYMHICSEKGQEIYKSAADTEEVCRRIY 217

Query: 196 ----------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                     +PE  Y G  +    K   D + + L N  EE+    + DY++   +  +
Sbjct: 218 GEDGSSEDFPMPEDVYLGQDIIEHAKNYFDLHGNSLENVSEEERRKALVDYALPLNIAGL 277

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             DLK   I +D +  E   H  + + +  ++D L   G  YE                 
Sbjct: 278 ERDLKKYRIVYDNWFRESTVHEKNETKL--VVDKLMEAGKAYE----------------Q 319

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV 364
              + FR+T  G D D  L +S+G YTY   D+AY   K   R FD  I V+G+DH GYV
Sbjct: 320 DGAVWFRATDYGMDKDFVLKRSNGLYTYIVPDIAYHYNKLVTRNFDKAINVLGADHHGYV 379

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A+    ++++V+L ++VRL R+G  +K+SKR+G  ITL  ++DE+  D+ RF
Sbjct: 380 PRLKAALTALGVDASKLDVVLMQMVRLVRNGETVKLSKRSGKAITLVTLLDEIPIDAARF 439

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
               R+ +   +FD     E+S +NPV+YVQYA+AR  S+ R   +              
Sbjct: 440 FFNLREANSQFEFDLDLAIEKSSQNPVYYVQYAHARICSMLRALAE----------EGTQ 489

Query: 485 IPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           +P++++     D+ E++LI HLA  P+ ++ A    +P K+  Y  DLA++FH  +    
Sbjct: 490 VPEKADLSVLTDSREIELIRHLASLPKEVDLAAKTYDPAKITKYAVDLATLFHRFYD--- 546

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    A   +L   RL L  AV   + + L I+ +E+P +M
Sbjct: 547 ---ACSVKNAETEELKNARLLLCVAVRQTLRNVLTILNIEAPEKM 588


>gi|306819519|ref|ZP_07453226.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701227|ref|ZP_07638249.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|304647811|gb|EFM45129.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307613621|gb|EFN92868.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 559

 Score =  296 bits (758), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 190/586 (32%), Positives = 293/586 (50%), Gaps = 66/586 (11%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           L E+D   KV+        +ERP+   HG  +TN AM L++  G+ P  +AE+ V  I  
Sbjct: 25  LNEVDLGAKVK--------VERPKSREHGDWATNIAMQLAKTAGVKPRDLAEMFVKAISG 76

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              V+S  +AG GFIN+ L       +++ I+ +G  +G+N   +G  +N+E+VSANPTG
Sbjct: 77  IEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQHINLEYVSANPTG 136

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+G  R A VGD+LA LM  SG +VTREYY ND G QI+  A S+    +        
Sbjct: 137 PIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLLAAARGL------ 190

Query: 195 DLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
             PE  Y G Y+  +  ++  +       +    P+       + + V  M   I+  L 
Sbjct: 191 PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGVTLMFSEIKAALA 250

Query: 251 ALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               + D+F  E+  +  G      + +D L                   +    D    
Sbjct: 251 KFRTEFDVFFHENSLYETGKVEAAIEFLDGLG------------------EIAHKDGATW 292

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           L  +T  GDD DR L+KSDG+  YFAAD+AY++ K ERG D  IY++G+DH GY+ R+ A
Sbjct: 293 LL-TTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGADHHGYIGRMMA 351

Query: 370 VAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           + AA  +     + +L+ +LV LYR G  +KMSKRAG+ +TL   V+ VG D+ R+ ++ 
Sbjct: 352 MCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAVGVDAARYSLVR 411

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                 LD D   +   + ENPV+YVQYA+AR  ++ + A              + + + 
Sbjct: 412 SSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAAS------------HGVSRG 459

Query: 489 SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           + FD  +L      +LI  LA++P  +  A   + P+ +A YL +LA  +H  +   R  
Sbjct: 460 AGFDPGQLRAAADGELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYGKRRVT 519

Query: 543 PRLRFVQANNRKLTMMR---LQLVHAVASIINSGLNIIGVESPNEM 585
           P      A +  +T      L L  AV  ++ +GLN++GV +P  M
Sbjct: 520 P------AGDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559


>gi|294790545|ref|ZP_06755703.1| arginine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458442|gb|EFG26795.1| arginine--tRNA ligase [Scardovia inopinata F0304]
          Length = 600

 Score =  296 bits (757), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 191/589 (32%), Positives = 300/589 (50%), Gaps = 68/589 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +IV+ RP+D  HG  +TN AM L +  G+ P  +A L   R++    + SV +AG GFIN
Sbjct: 46  KIVVMRPKDRTHGDWATNIAMQLGKKAGMAPRDLAALFADRLRKAEGIASVEVAGPGFIN 105

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++  I+  G ++G+N    G  +N+EFVSANPTGP+H+G  R A +GD+L
Sbjct: 106 IVLDSASAAAVVDQILSQGRKFGQNDHLTGKTLNLEFVSANPTGPIHIGGTRWAAIGDSL 165

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G  V REYY ND G QIN  A S+          +    P   Y G Y+  + 
Sbjct: 166 ARVLEANGATVVREYYFNDHGEQINRFARSLV------AAAHGEPAPADGYQGEYITEIA 219

Query: 211 KELADKYSS---ELLNFP-------EEKWLPIVKDY---SVQAMMKIIRDDLKALNIQHD 257
           + +  +  +   ++LN P        E   P  +++    VQ M   I+  +    +  D
Sbjct: 220 EAVTRQAQADGVDILNLPRVREDDGSEGDSPQREEFRNRGVQMMFDQIKKTMSDFRVNFD 279

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           ++  E+  +  +   +      L  QG +Y+      K   T           F+ST  G
Sbjct: 280 VYFHENSVY--EDGEVDRAFRRLKDQGDIYQ------KDGAT----------WFQSTKYG 321

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           DD DR ++KS+G   Y  AD+AY+  K  R     D  IY++G+DH GYV+RL+AV AA 
Sbjct: 322 DDKDRVIIKSNGETAYIMADIAYYLNKRHRVKNPADIAIYMLGADHHGYVRRLQAVCAAF 381

Query: 375 SEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            +K    + VL+ +LV + +DG P++MSKRAG+ +T+  +VD VG D+ R+ +     ++
Sbjct: 382 GDKPGYNMQVLIGQLVNVVKDGKPVRMSKRAGNVVTMEDLVDAVGVDAARYSLERTTYNQ 441

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESE 490
            +D D   + + S ENPV+YVQYA+AR +++ R A+         D  L      P +SE
Sbjct: 442 NIDIDLDLMTKHSNENPVYYVQYAHARSKNVDRNAQAAGITVAGADLSLLDS---PADSE 498

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPR 544
                  L+  LA YP V++ A    EP+++A YL DLA  +H  ++  R        P 
Sbjct: 499 -------LLSQLALYPSVVQTAADLNEPHRIAHYLEDLAGSYHQWYAAERVVPMKLTEPE 551

Query: 545 LRFVQANNRKL--------TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L    A   +L        +  RL+L  A   +  +GL ++GV +P++M
Sbjct: 552 LEGSDARKTQLAKDPDPARSSARLKLNDAACQVFENGLALLGVTAPDKM 600


>gi|268316200|ref|YP_003289919.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333734|gb|ACY47531.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 564

 Score =  296 bits (757), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 305/583 (52%), Gaps = 70/583 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPD-VDSVFIAGK 86
           R  +E+P +  HG L+TNAAM L+R L   P  IAE I  R++   +DP  V SV +AG 
Sbjct: 24  RPELEKPNNPEHGDLATNAAMQLARYLKRPPRQIAEEIAERLRALPLDPRRVASVEVAGP 83

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N   +P YL ++L+ I+ +G  YGR+ +G+G    +E+VSANPTGP+ VGH R AV+
Sbjct: 84  GFLNFRFAPDYLAQVLADILAAGERYGRSDLGQGRPAIVEYVSANPTGPLTVGHGRNAVL 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ------------QALYNNDS 194
           GDT+A+L+ + GY VTREYY NDAG Q+  L  SV  RY             QA      
Sbjct: 144 GDTIANLLDWIGYRVTREYYYNDAGRQMRVLGESVRARYLALVDPNLPTKKIQAAEGEWV 203

Query: 195 DLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           ++PE +    Y G Y+  + + L +++   L +   E   P  K+ + + + + IR  L 
Sbjct: 204 EVPEPFPEDGYLGDYIIDIARMLYEQHGEALRDV--EDITPF-KEAAEKVIFEDIRRTLA 260

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L I  D + +E   +      I ++++ L  +GY+YE                    + 
Sbjct: 261 RLGIHMDSYFNEHTLYEN--GKIWEVVEALRAKGYIYE----------------KDGAVW 302

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH----SGYVKR 366
           FR++ +G D D  L+K  G  TY   D+AY   K+ERGF+ ++ V G+DH       ++ 
Sbjct: 303 FRTSALGKDQDTVLVKRTGEPTYRLPDIAYHITKFERGFERIVDVFGADHIATYPDVLRA 362

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           LE +   VS    +++V++ + V L R G P+KMS R   ++TL  ++DEVG D  RF  
Sbjct: 363 LEVLGYDVS----KVDVVIYQFVTLVRGGEPVKMSTRKATYVTLDELIDEVGEDVTRFFF 418

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPR 482
           L R  +  L+FD    +E S++NPVFY+QYA+AR  SI R+A ++     P+ D  L   
Sbjct: 419 LMRSPNTHLEFDLDLAREASEKNPVFYLQYAHARICSIMRKADEVGLKESPNPDLTLLQH 478

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                      +E  LI  L  +P VI+ A    EP+++A YL ++A  F   + H R  
Sbjct: 479 E----------AEQALIKELMRFPEVIQEAAQTYEPHRVANYLREVAVAFTKFYDHCR-- 526

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +      L   RL L  A   ++ +GL ++G+ +P  M
Sbjct: 527 -----IIGEPEPLAQARLALARAARLVLANGLRVLGISAPERM 564


>gi|293602808|ref|ZP_06685248.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818824|gb|EFF77865.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 561

 Score =  296 bits (757), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 193/568 (33%), Positives = 299/568 (52%), Gaps = 48/568 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           +++ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P     VDS  IAG G
Sbjct: 28  VLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIVDALMAAPGARDLVDSAEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL ++ +  + +++++   G  YGR     G K+ +EFVSANPTGP+HVGH R A +G
Sbjct: 88  FINLRITAAARQAVIAAVAEQGASYGR-APRSGEKILVEFVSANPTGPLHVGHARQAALG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L  L    G++VTRE+Y NDAG QI+ LA+SV  R  + L     D P   Y G Y+ 
Sbjct: 147 DALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQAR-ARGLTTESPDWPADGYKGDYIA 205

Query: 208 HVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFIS 261
            + ++  D  +   S+         +  + D  V A+  + R+   DL+A  +  D +  
Sbjct: 206 DIARDFQDGKTIQPSDGEPVTATGNIDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYYL 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDD 319
           E   +      +   ++ L   G+ YE                +   L  R+T +  GDD
Sbjct: 266 ESSLYTS--GRVEATVNALIAGGHTYE----------------EGGALWLRTTELGTGDD 307

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-- 377
            DR + KS+G YTYF  D+AY K K+ERGF   + + GSDH G V R+ A   A+ E   
Sbjct: 308 KDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHGTVARVRAGLQALGEGIP 367

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K   + +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+      F
Sbjct: 368 KDYPSYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 427

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D      +S ENPV+Y+QYA+AR  ++   A    P  D      +++   SEF      
Sbjct: 428 DVDLALSKSDENPVYYIQYAHARISTMINNAG--MPAADVAAADTSLLTAPSEF-----A 480

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LAE+P V+  A     P+ +AF+L D AS FH  ++  R       V  ++  L +
Sbjct: 481 LMQRLAEFPNVVALAAQDLSPHHIAFWLRDCASDFHAWYAAER-------VLVDDVALKL 533

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L      ++ +GL ++GV +P  M
Sbjct: 534 ARLRLAATTRQVLANGLELMGVSAPERM 561


>gi|78067731|ref|YP_370500.1| arginyl-tRNA synthetase [Burkholderia sp. 383]
 gi|109894977|sp|Q39CG0|SYR_BURS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77968476|gb|ABB09856.1| arginyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 593

 Score =  296 bits (757), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 202/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAT-----VAPVITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL LS +  + +++++   G  +G +   
Sbjct: 67  QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A      +    + + L  
Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDFLNGETVAASDGEPVKGTGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + R+G  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMREGQEVKISKRAGSYVTV 407

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + ++D    P   + Q +    +   L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTSAQAAS--LMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|269976850|ref|ZP_06183824.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934681|gb|EEZ91241.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 559

 Score =  296 bits (757), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 190/586 (32%), Positives = 293/586 (50%), Gaps = 66/586 (11%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           L E+D   KV+        +ERP+   HG  +TN AM L++  G+ P  +AE+ V  I  
Sbjct: 25  LNEVDLGAKVK--------VERPKSREHGDWATNIAMQLAKTAGVKPRDLAEMFVKAISG 76

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              V+S  +AG GFIN+ L       +++ I+ +G  +G+N   +G  +N+E+VSANPTG
Sbjct: 77  IEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQHINLEYVSANPTG 136

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+G  R A VGD+LA LM  SG +VTREYY ND G QI+  A S+    +        
Sbjct: 137 PIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLLAAARGL------ 190

Query: 195 DLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
             PE  Y G Y+  +  ++  +       +    P+       + + V  M   I+  L 
Sbjct: 191 PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGVTLMFSEIKAALA 250

Query: 251 ALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               + D+F  E+  +  G      + +D L                   +    D    
Sbjct: 251 KFRTEFDVFFHENSLYETGKVEAAIEFLDGLG------------------EIAHKDGATW 292

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           L  +T  GDD DR L+KSDG+  YFAAD+AY++ K ERG D  IY++G+DH GY+ R+ A
Sbjct: 293 LL-TTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGADHHGYIGRMMA 351

Query: 370 VAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           + AA  +     + +L+ +LV LYR G  +KMSKRAG+ +TL   V+ VG D+ R+ ++ 
Sbjct: 352 MCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAVGVDAARYSLVR 411

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                 LD D   +   + ENPV+YVQYA+AR  ++ + A              + + + 
Sbjct: 412 SSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAA------------AHGVSRG 459

Query: 489 SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           + FD  +L      +LI  LA++P  +  A   + P+ +A YL +LA  +H  +   R  
Sbjct: 460 AGFDPGQLCAAADGELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYGKRRVT 519

Query: 543 PRLRFVQANNRKLTMMR---LQLVHAVASIINSGLNIIGVESPNEM 585
           P      A +  +T      L L  AV  ++ +GLN++GV +P  M
Sbjct: 520 P------AGDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559


>gi|15643850|ref|NP_228899.1| arginyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|7674352|sp|Q9X0H8|SYR_THEMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|4981637|gb|AAD36169.1|AE001768_18 arginyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 546

 Score =  296 bits (757), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 185/557 (33%), Positives = 286/557 (51%), Gaps = 41/557 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P     G LSTN AM L++ L  +P  IA+ IV  +  DP  D + I G GFIN +L
Sbjct: 26  VEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAQEIVKSLDEDPSFDRIEIMGPGFINFFL 85

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S   LR ++ +++    EYGR  +G G KV  E+ SANPTGP  VGH R  ++GD L+ +
Sbjct: 86  SNELLRGVVKTVLEKKDEYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+VTRE YINDAG QI  LA S++ RY Q L   + ++PEG Y G YL  + ++L
Sbjct: 146 YKELGYDVTREMYINDAGKQIRLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++      +   E+     K  ++  ++  ++D L+ +    D++ SE      +   +
Sbjct: 205 VNEIGDRYKDLWNEEVEEFFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +++  L  +  VYE                D    L  S  + D+ D+ L++SDG+YTY
Sbjct: 263 EEVLKLLKNKDVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F  D+AY   KY+RGF  +  + GSDH G++ R++A   A+       NV+L + V L R
Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
            G  ++MS RAG+F+TL  ++DEVG D+ R+       +  + FD    K +S +NPV+Y
Sbjct: 367 GGEIVRMSTRAGEFVTLDELLDEVGRDATRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508
           VQYA+AR  ++F  A+            + V  +E +      +  E  L+ +L  +   
Sbjct: 427 VQYAHARIHNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTA 475

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P +L  YL  LA  FH  ++      +   V   N +L+  RL L  A   
Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529

Query: 569 IINSGLNIIGVESPNEM 585
           ++  GL +IGV +P  M
Sbjct: 530 VLRKGLKLIGVSAPERM 546


>gi|146329599|ref|YP_001209938.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166232783|sp|A5EXU4|SYR_DICNV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146233069|gb|ABQ14047.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 592

 Score =  296 bits (757), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 308/601 (51%), Gaps = 69/601 (11%)

Query: 24  VEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++ ++LD+ I IER +D  +G  ++N A+  ++   + P  +A+ +V  + +   V  + 
Sbjct: 22  IDIRLLDQAIEIERCKDPENGDFASNIALKYAKVFKMKPRQLADELVVSVPLMDSVAGME 81

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           +AG GFIN+ LS   +  +L ++V     YG        K+ +EFVSANPTGP+HVGH R
Sbjct: 82  VAGPGFINIRLSRESITAVLENVVAKKERYGCFENPNARKILVEFVSANPTGPLHVGHGR 141

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A  GD+L+ L+  +G++V REYYIND G Q++ LALSV+WRY Q        LP+G Y 
Sbjct: 142 GAAYGDSLSRLLIANGHQVDREYYINDFGRQMDILALSVYWRYVQEC-GIGVALPKGIYQ 200

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLP------------------------------- 231
           G Y+  + K+L +K   + L +P  +W P                               
Sbjct: 201 GDYVIDIAKKLKEK-EGKRLAYPVNEWAPDYPQTWTQEQVDNGDRDRWIDGAIAGLKEKL 259

Query: 232 ------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                  V D ++   +  IR DL+   +  D + SE      D   I + +  +   GY
Sbjct: 260 GQKEYRGVFDLALSMELDDIRGDLEEFGVFFDRWFSERSMSENDM--INNALKKVDEAGY 317

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +YE                    + F+ST  GD+ DR + + +G  TYF++D++Y   KY
Sbjct: 318 LYE----------------KDGAVWFKSTAFGDEKDRVVRRKNGMTTYFSSDISYHFDKY 361

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            RG+D MI ++G+DH GY+ R+ A  AA+     ++ + L +   LY+ G  ++MS R+G
Sbjct: 362 NRGYDQMIDILGADHHGYMARVRASLAALGLDPEKLVIALVQFAVLYKGGEKMQMSTRSG 421

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +F+TLR + + VG+D+ RF  + RK  + LDFD    +  SK+NP +YV+YA+ARC  + 
Sbjct: 422 EFVTLRDLREHVGADAARFFYVMRKPEQHLDFDLDLAESNSKDNPFYYVEYAHARCCGML 481

Query: 466 RQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            +A+    +  ++  P   +  + +  +  E  LI  L  YP V+  A     P+++  Y
Sbjct: 482 NKAE----EEGYEFSPEAALKCRNALVEPEETALISELHRYPEVVIAAGKQMAPHQVIIY 537

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L +LA+ +H ++  G +      V   + ++   RL L  AV  ++ + L IIGV++   
Sbjct: 538 LKELATRWHHYYDVGHK------VLHEDEEIRNARLLLTWAVRQVLRNALAIIGVQARER 591

Query: 585 M 585
           M
Sbjct: 592 M 592


>gi|319778817|ref|YP_004129730.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108841|gb|ADU91587.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 560

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 191/567 (33%), Positives = 300/567 (52%), Gaps = 47/567 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP++  HG LSTN AM L++PL  +P  +A+ IV  ++ +P     +DSV IAG G
Sbjct: 28  IQLERPKNPEHGDLSTNIAMQLAKPLKKNPREVAQDIVDTLQSNPSYNLLLDSVEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN   + S  + I+  I      YG N      KV +EFVSANPTGP+HVGH R A +G
Sbjct: 88  FINFKFNVSVHQDIIHLIQSQKEIYG-NSPKNYKKVIVEFVSANPTGPLHVGHARQAALG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +  L+  +GY++ RE+Y NDAG QIN LA SV  R  + +  +  D P   Y G Y+ 
Sbjct: 147 DCICRLLEAAGYDIYREFYYNDAGNQINNLASSVQARL-KGIDPDHPDFPADGYRGDYIN 205

Query: 208 HVGKELADKYSS-----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            + ++   K +      E+    + + L  ++ ++V  + +    DL A N++ D +  E
Sbjct: 206 DIARDFITKETVKADDIEITASGDVENLNDIRKFAVAYLRREQDLDLLAFNLKFDRYYLE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDDV 320
              +      + + ++ L   G+ YE                    L  R+T +  GDD 
Sbjct: 266 SSLYTD--GKVEETVNTLTSNGHTYE----------------QDGALWLRTTELGTGDDK 307

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--K 378
           DR + KSDG+YTYF  D+AY K K++RG+   I + GSDH G V R+ A    ++    K
Sbjct: 308 DRVMRKSDGTYTYFVPDVAYHKTKWDRGYQKAIDIQGSDHHGTVARVRAGLQGLNLGIPK 367

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
              + +L ++VR+ R+G  +K+SKRAG ++T+R ++D VG D+ R+ ++ RK      FD
Sbjct: 368 DYPSYILHKMVRVMRNGEEVKISKRAGSYVTMRDLIDWVGQDATRYFLIQRKADTEFTFD 427

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                 + +ENPVFY+QYA+AR   + + A ++   +D         P       SE+ L
Sbjct: 428 IDLALSKKEENPVFYIQYAHARICKLLKDAGELAGQVDQADISLLTAP-------SEINL 480

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  L+E P +I+ A     P+ +AF+L DLA  FH  +S  +       V  ++  L + 
Sbjct: 481 LKRLSELPDLIQIAIKELSPHLVAFWLTDLARDFHSWYSSEK-------VFVDDISLKLA 533

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   ++ + L+++GV +P +M
Sbjct: 534 RLALADATKQVLANALDLLGVSAPTDM 560


>gi|227876244|ref|ZP_03994360.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227843205|gb|EEJ53398.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 559

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 190/586 (32%), Positives = 293/586 (50%), Gaps = 66/586 (11%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           L E+D   KV+        +ERP+   HG  +TN AM L++  G+ P  +AE+ V  I  
Sbjct: 25  LNEVDLGAKVK--------VERPKSREHGDWATNIAMQLAKTAGVKPRDLAEMFVKAISG 76

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              V+S  +AG GFIN+ L       +++ I+ +G  +G+N   +G  +N+E+VSANPTG
Sbjct: 77  IEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQHINLEYVSANPTG 136

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+G  R A VGD+LA LM  SG +VTREYY ND G QI+  A S+    +        
Sbjct: 137 PIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLLAAARGL------ 190

Query: 195 DLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
             PE  Y G Y+  +  ++  +       +    P+       + + V  M   I+  L 
Sbjct: 191 PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGVTLMFSEIKAALA 250

Query: 251 ALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               + D+F  E+  +  G      + +D L                   +    D    
Sbjct: 251 KFRTEFDVFFHENSLYETGKVEAAIEFLDGLG------------------EIAHKDGATW 292

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           L  +T  GDD DR L+KSDG+  YFAAD+AY++ K ERG D  IY++G+DH GY+ R+ A
Sbjct: 293 LL-TTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGADHHGYIGRMMA 351

Query: 370 VAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           + AA  +     + +L+ +LV LYR G  +KMSKRAG+ +TL   V+ VG D+ R+ ++ 
Sbjct: 352 MCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAVGVDAARYSLVR 411

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                 LD D   +   + ENPV+YVQYA+AR  ++ + A              + + + 
Sbjct: 412 SSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAA------------AHGVSRG 459

Query: 489 SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           + FD  +L      +LI  LA++P  +  A   + P+ +A YL +LA  +H  +   R  
Sbjct: 460 AGFDPGQLRAAADGELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYGKRRVT 519

Query: 543 PRLRFVQANNRKLTMMR---LQLVHAVASIINSGLNIIGVESPNEM 585
           P      A +  +T      L L  AV  ++ +GLN++GV +P  M
Sbjct: 520 P------AGDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559


>gi|258652303|ref|YP_003201459.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555528|gb|ACV78470.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 551

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 192/556 (34%), Positives = 283/556 (50%), Gaps = 34/556 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++RP+   HG  +T  AM L++     P  IAE+I A +  +P +  V IAG GF+N+
Sbjct: 28  IPLDRPKSREHGDYATPVAMKLAKAAHRPPRQIAEIIAAHLADEPGIAGVSIAGPGFLNI 87

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +  +    ++  IV  G  YG      G +VN+EFVSANPTGP+H+G  R A VGD L 
Sbjct: 88  SVETAAAASLVGRIVADGAAYGHGDALAGRQVNLEFVSANPTGPIHIGGARWAAVGDALG 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +++  G  V REYY NDAGAQI+  A S+    +Q         PE  Y G Y+  +  
Sbjct: 148 RILSTQGATVIREYYFNDAGAQIDRFARSLLAAARQ------QPAPEDGYGGDYIVEIAG 201

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +    +      P+++   + +   V+ M   I+  L       D++  E+  H     
Sbjct: 202 RIT-AANPGAPQLPDDQATELYRAQGVELMFDEIKATLHTFRTDFDVYFHENSLHE---- 256

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
                       G V + +    + K +     +       S   GDD DR ++KSDG  
Sbjct: 257 -----------SGAVGQAV---QRLKDSGHLTFNDGAWWLNSKAYGDDKDRVVIKSDGQP 302

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y A DLAYF  K  RGFD  IY++G+DH GY+ RL+A AAA  +    + VL+ ++V L
Sbjct: 303 AYIAGDLAYFLDKRARGFDLCIYMLGADHHGYIARLKAAAAAFGDDPDVVEVLIGQMVNL 362

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RDG PI+MSKRAG  ITL  +++ +G D+ R+ ++       LD D      Q+ +NPV
Sbjct: 363 VRDGEPIRMSKRAGTVITLDDLIEALGVDAARYALIRYSVDTTLDLDLDLWTRQTSDNPV 422

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTS-ELQLIVHLAEYPRVI 509
           FYVQYA+AR  S+ R A     DL  +L  R+    +    DT+ E +LI  LA +P V+
Sbjct: 423 FYVQYAHARLASLARNAA----DLGIELGLRSGGAYDPALLDTARESELIALLAAWPGVL 478

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A   +EP+++A YL DLAS +H  +   R  P            T+ RL L  A   +
Sbjct: 479 ATAAELREPHRVARYLEDLASGYHKFYDSVRVLP---MGDEEAGPATIARLWLCAATRQV 535

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV++P  M
Sbjct: 536 LANGLAVLGVDAPERM 551


>gi|148652106|ref|YP_001279199.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048457|sp|A5WC58|SYR_PSYWF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148571190|gb|ABQ93249.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 609

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 193/584 (33%), Positives = 305/584 (52%), Gaps = 42/584 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I R +   HG  ++N A+  ++    +P  +AE + A +  +  +  + IAG GFIN++L
Sbjct: 36  ITRSKSPEHGDYASNIALTAAKAAKSNPRALAEQLTAALPANDSIAKLEIAGPGFINIFL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L +I     +YG        K+ +EFVSANPT  +HVGH R A  G ++A+L
Sbjct: 96  NTDAKFAVLDAIFAKNQKYGLTDEFANKKIQVEFVSANPTSSLHVGHGRGAAFGMSVANL 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +   GYEVTREYY+NDAG Q++ LA S + RY Q L       P G Y G Y+  + + +
Sbjct: 156 LEAVGYEVTREYYVNDAGRQMDILATSTYLRYLQ-LNGEQIHFPVGGYQGDYVTDIAQTI 214

Query: 214 ADK--------YSSELLNFPEEKWLPIVKDYSVQAMMK---------IIRDDLKALNIQH 256
             +        Y+    N PE++ +  V D   + ++          II +  +AL   +
Sbjct: 215 KTQQNDAYVHSYADISANAPEDE-VSEVNDAGEKEVVSGDKNAHIDVIIANSKQALGDNY 273

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI---------LPPPKSKTTQKCDMDRK 307
            +F+     +      + DI D+L   G  +E           + P  ++   K  +  K
Sbjct: 274 AVFL-----NAALSEILGDIKDDLNEFGVRFERWFSEKSIADEIEPVLAELDSKGHLYEK 328

Query: 308 --QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              + FRST  GD+ DR + +++G  TYFA+D+AY K K+ERGFD +I V G+DH GY+ 
Sbjct: 329 DGNIWFRSTDFGDEKDRVVRRANGLTTYFASDIAYHKNKFERGFDTVINVWGADHHGYIA 388

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R+ A   A+   + ++ V+L + V L+R    I+MS R+G F+TLR + +EVG+D+ RF 
Sbjct: 389 RVRAALTALGIDEKRLEVILVQFVALWRGEEKIQMSSRSGKFVTLRELREEVGNDAARFY 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            + RK    +DFD    K QSK+N V+Y+QYA+AR  S+  +      D+D     +   
Sbjct: 449 YVARKPEVHIDFDLELAKSQSKDNAVYYIQYAHARVCSVLEKLAAKGFDVD---DAQGSA 505

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            Q      +E +LI  LA YP  ++ A    +P+ L  YL DLAS+FH  ++  R  P  
Sbjct: 506 QQHLLTADAESELIKLLAAYPATLKRAATGYDPHVLTNYLKDLASLFHAWYNDNRILPVS 565

Query: 546 RFVQA--NNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                  +  +L MM  RL+L  AV  ++ +GL+++G+ +P  M
Sbjct: 566 IIADETPSQEELDMMQARLRLSKAVRQVLANGLSLLGLSAPTSM 609


>gi|209518210|ref|ZP_03267037.1| arginyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209501325|gb|EEA01354.1| arginyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 596

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 190/587 (32%), Positives = 298/587 (50%), Gaps = 60/587 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  +   P     +D+  +AG G
Sbjct: 37  IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDTLLAHPQAKGLIDTAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + ++++++     YGR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLTAAAKQGVIAAVLAEKDAYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA ++   G++V RE+Y NDAG QI+TLALS   R  + L   D   P   Y G Y+ 
Sbjct: 157 DALAHVLGSQGWDVHREFYYNDAGVQIHTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215

Query: 208 HVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+  +  + E      +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGVTVEASDGEPVTGARDVEDLEAIRRFAVTYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   +D L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLY--TEGRVEKTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + K+DG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419
             + +L ++V + R+G  +K+SKRAG ++T+R +++  G                     
Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437

Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  +    +   +  
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECNTRYGFEEST 497

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V P  SE     + L+  LAE+P ++++A     P+ +AFYL +LA  FH  +  
Sbjct: 498 LASVDVAPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRELAGEFHSFY-- 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N R   V  ++      R+ L+ A   ++ +GL  IGV +P +M
Sbjct: 553 ---NDRAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596


>gi|121606589|ref|YP_983918.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166232820|sp|A1VTL9|SYR_POLNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120595558|gb|ABM38997.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 558

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 187/568 (32%), Positives = 294/568 (51%), Gaps = 46/568 (8%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAG 85
           D+   E P+  AHG  +  AAM L++PL  +P   AE + AR+ + P     V+++ IAG
Sbjct: 25  DKAAFESPKVAAHGDFACTAAMQLAKPLKQNPRQTAESLRARLLLAPAFERWVEAIEIAG 84

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN+ L P+  ++ +  ++ +G +YG        K+ +EFVSANPTGP+HVGH R A 
Sbjct: 85  PGFINIRLKPAAKQETVREVLQAGAQYGTQPTDHERKMIVEFVSANPTGPLHVGHGRQAA 144

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +GD + +L A  G +V RE+Y NDAG QI+TLA S   R  + L   D++ PE  Y G Y
Sbjct: 145 LGDAICNLHATQGLDVWREFYYNDAGVQIHTLATSTQAR-AKGLKPGDANWPEPAYNGDY 203

Query: 206 LKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           +  + ++   K +      E     + + +  ++ ++V  +      DLKA +++ D + 
Sbjct: 204 IDDIARDFLAKKTVKSDDREFTASGDVEDMEAIRQFAVAYLRHEQDLDLKAFSVKFDNYY 263

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E   +      +   +  L   G  YE                    L  RST  GDD 
Sbjct: 264 LESSLYSS--GRVESTVQRLKDAGKTYE----------------QDGALWLRSTDYGDDK 305

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKK 378
           DR + KSDG++TYF  D+AY   K+ERGF   + + G DH G + R+ A   AA      
Sbjct: 306 DRVMKKSDGTFTYFVPDVAYHLAKWERGFTKAVNIQGMDHHGTIARVRAGLQAANAGIPA 365

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
              + +L  +VR+ R G  +K+SKRAG ++TLR +++   +D+VRF +L RK      FD
Sbjct: 366 GYPDYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLIEWTSADAVRFFLLSRKPDTEYIFD 425

Query: 439 FCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                 ++ ENPV+YVQYA+AR C  +     D       DL P    PQ          
Sbjct: 426 IDLALAKNNENPVYYVQYAHARICSILTAWGGDESQFGHVDLSPL-ASPQAQ-------A 477

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L++ LA+Y  ++ +A     P+ +AFYL +LA+ +H ++   R       +  ++  + +
Sbjct: 478 LMLLLAKYTDMLSHAAAGFAPHDVAFYLRELAACYHSYYDAER-------ILVDDEAVKL 530

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL LV A A ++++GL ++GV +P +M
Sbjct: 531 ARLALVAATAQVLHNGLAVLGVSAPRKM 558


>gi|317404348|gb|EFV84773.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 566

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 188/568 (33%), Positives = 297/568 (52%), Gaps = 48/568 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           +++ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P     V+S  IAG G
Sbjct: 33  VLLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQAIVEALLALPGARDLVESAEIAGPG 92

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL ++ +  + +++++   G  +GR     G K+ +EFVSANPTGP+HVGH R A +G
Sbjct: 93  FINLRVTAAARQAVITAVAEQGEAFGR-AARSGEKILVEFVSANPTGPLHVGHARQAALG 151

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L  L    G++VTRE+Y NDAG QI  LA+SV  R  + +  +  D P   Y G Y+ 
Sbjct: 152 DALCRLYDAIGWDVTREFYYNDAGNQIENLAISVQAR-ARGVGTDSPDWPADGYKGDYIV 210

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +        L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 211 DIARDFQAGKTIQASDGEPVTATGNIDSLEDIRAFAVAYLRREQDLDLQAFGLKFDNYYL 270

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDD 319
           E   +      +   +  L   G+ YE                +   L  R+T +  GDD
Sbjct: 271 ESSLY--TSGRVEATVKALIAGGHTYE----------------EGGALWLRTTELGTGDD 312

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-- 377
            DR + KS+G YTYF  D+AY K K+ERGF   + + GSDH G V R+ A   A+ E   
Sbjct: 313 KDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHGTVARVRAGLQALEEGIP 372

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K   + +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+      F
Sbjct: 373 KDYPSYVLHKMVKVMRGGQEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 432

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D      +S ENPV+Y+QYA+AR  S+   A    P  +      +++   SEF      
Sbjct: 433 DVDLALSKSDENPVYYIQYAHARICSVINNAG--MPAAEVAAADASLLTAPSEF-----A 485

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LAE+P V+  A     P+ +AF+L D A+ FHG ++  R       V  ++  L +
Sbjct: 486 LMQRLAEFPHVVALAAQELAPHHIAFWLRDCAADFHGWYNAER-------VLVDDPALKL 538

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L      ++ +GL ++GV +P  M
Sbjct: 539 ARLRLAATTRQVLANGLALLGVSAPERM 566


>gi|167585288|ref|ZP_02377676.1| arginyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 598

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 200/616 (32%), Positives = 313/616 (50%), Gaps = 62/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAANADVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 71

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL L+ +  + ++++++  G  +G +   
Sbjct: 72  QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLTAAAKQAVIAAVLAEGRGFGLSTRE 131

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTGP+HVGH R A +GD LA+++A  G  V RE+Y NDAG QI  LA
Sbjct: 132 HGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGCAVHREFYYNDAGVQIGNLA 191

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232
           +S   R  + L   D+  PE  Y G Y+  +      G+ +A K    +    + + L  
Sbjct: 192 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLEA 250

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   ++     +   +D L + G  YE    
Sbjct: 251 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEQTVDALIKAGVTYE---- 304

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +
Sbjct: 305 ------------QDGALWLRTTDNGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKV 352

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A      +   K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412

Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R                  ++DE     G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  + + +    P   + Q +   T    L+  LAEYP ++
Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY-NGELAQLPGADLSQLTS--TQAASLMQKLAEYPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 530 SHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRTARAALLAATRQV 582

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 583 LENGLAMLGVSAPAKM 598


>gi|295675302|ref|YP_003603826.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435145|gb|ADG14315.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 596

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 191/588 (32%), Positives = 301/588 (51%), Gaps = 62/588 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  + ++P     +D+  +AG G
Sbjct: 37  IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVEALLVNPQAKGLIDTAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + +++++      YGR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLTAAAKQGVIAAVFAEKEAYGRSRRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA ++   G++V RE+Y NDAG QI+TLALS   R  + L   D   P   Y G Y+ 
Sbjct: 157 DALAHVLESQGWDVHREFYYNDAGVQIHTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215

Query: 208 HVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+  +  + E      +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGITVEASDGEPVTGARDVEDLEAIRRFAVTYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   +D L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLY--TEGRVEKTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + K+DG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419
             + +L ++V + R+G  +K+SKRAG ++T+R +++  G                     
Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437

Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  +    +  LD  
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECNARY-GLDES 496

Query: 479 LFPR-NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           + P  ++ P  SE     + L+  LAE+P ++++A     P+ +AFYL +LA  FH  + 
Sbjct: 497 VLPSVDLAPLASE---RSMALLNKLAEFPDMLQHAADELAPHAVAFYLRELAGEFHSFY- 552

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               N R   V  ++      R+ L+ A   ++ +GL  IGV +P +M
Sbjct: 553 ----NDRAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596


>gi|323524573|ref|YP_004226726.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323381575|gb|ADX53666.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 596

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 189/587 (32%), Positives = 302/587 (51%), Gaps = 60/587 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL ++P  +A+ IV  +   P     ++S  +AG G
Sbjct: 37  IALERPKVAAHGDVACNVAMQLAKPLRVNPRQLAQQIVDTLLGQPQAQGLIESAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + ++++++     YGR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLAAAAKQAVVTAVLAEQDAYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++++A  G++V RE+Y NDAG QI TLALS   R  + L   D+  P+  Y G Y+ 
Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQAR-ARGLAPGDAGWPDSAYNGEYIA 215

Query: 208 HVGKELADKYS------SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+  +  +        +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGVTVSASDGEPVTGARDVENLDAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   +  L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLYT--EGRVEKTVQALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + KSDG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKSDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419
             + +L ++V + R+G  +K+SKRAG ++T+R +++  G                     
Sbjct: 378 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437

Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  + K  +   +  
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYGADESA 497

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++ P  SE     + L+  LAE+P ++++A     P+ +AFYL DLA  FH  +  
Sbjct: 498 LAKVDLAPLSSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N +   V  ++      R+ L+ A   ++ +GL IIGV +P +M
Sbjct: 553 ---NDKAERVLVDDAAERNARVALLAATRQVLANGLAIIGVSAPVKM 596


>gi|73539833|ref|YP_294353.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|109895024|sp|Q477C4|SYR_RALEJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72117246|gb|AAZ59509.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 595

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 200/594 (33%), Positives = 296/594 (49%), Gaps = 68/594 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           +  ERP+  AHG L+ N AM ++R L  +P  +A+ IVA ++ DP     V  + IAG G
Sbjct: 30  VTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRIVAMVQADPRAAELVAGMEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+P+    +L +++  G  YG    G    V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+++ GY+V RE+Y NDAG QI  LA+SV  R  +     D++ PE  Y G Y+ 
Sbjct: 150 DALANLLSWQGYDVHREFYYNDAGVQIQNLAVSVQAR-TRGFKPGDANWPEAAYNGDYIG 208

Query: 208 HVGKE-LADKYSS-------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            +  + LA K  S            PE+  L  ++ ++V  +      DL+A  ++ D +
Sbjct: 209 DIAADFLAGKTVSASDGEPVTASGNPED--LDSIRKFAVTYLRNEQDIDLQAFGVKFDHY 266

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E   +      +   +  L  +G  YE                    L  R+T  GDD
Sbjct: 267 YLESSLYT--DGRVEAAVQGLVGKGKTYE----------------SEGALWLRTTDDGDD 308

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEK 377
            DR + K+DG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A      +   
Sbjct: 309 KDRVMKKTDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGIP 368

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV-------------- 417
           K   + +L ++V + ++G  +K+SKRAG ++T+R ++      DE               
Sbjct: 369 KGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLDAGVADWPE 428

Query: 418 ----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
               G D+VRF +L RK      FD     +Q+ ENPV+YVQYA+AR  SIF        
Sbjct: 429 HFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFESWGGADW 488

Query: 474 DLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           +          +   +  D S   L L   LAE+P ++  A     P+ +AFYL DLA  
Sbjct: 489 ESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAFYLRDLAGD 548

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P  M
Sbjct: 549 FHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM 595


>gi|51246604|ref|YP_066488.1| arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81641259|sp|Q6AJJ9|SYR_DESPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50877641|emb|CAG37481.1| probable arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 552

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 181/559 (32%), Positives = 300/559 (53%), Gaps = 40/559 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89
           +  +E P+    G  STN A++L+     +P  +A ++  ++ ++   V  V IAG GF+
Sbjct: 30  KYTVELPKHEGQGDFSTNIALVLAGIEKRNPRELAGIVAEKLGLETAIVAGVEIAGPGFV 89

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ + P+    +L+ +  +G  +GR+ +G G KV +EFVSANPTGP+ +GH R A++GD+
Sbjct: 90  NITIQPAVWHGVLAEVFSAGENFGRSQVGAGRKVMVEFVSANPTGPLSIGHGRQAILGDS 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A L+  + ++V REYY N+AG Q+  L  S   RY + L   +   PE  Y G Y+  +
Sbjct: 150 IARLLEATNHDVFREYYYNNAGRQMRVLGESTRARYLE-LIGAEFSFPEDGYQGEYIIDI 208

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + L D++  +L + P+   +   KD + +A+ K I   L+ + I  D + +E   +  +
Sbjct: 209 AQSLVDEHGEKLKDEPD---VEPFKDQAEKAIFKDISGTLERMGIHFDNYYNERSLY--E 263

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I  ++  L  +G VYE            K D     + F +T +G + DR ++KS G
Sbjct: 264 NGHIDSVVQELRDKGLVYE------------KDDA----VWFETTKLGQEKDRVIIKSTG 307

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY   D+AY + K++R FD +I + GSDH   V  + +   A+    +++ VLL + V
Sbjct: 308 EPTYRLPDIAYHREKFKRNFDWLIDIFGSDHIATVPDVLSGVEALGYDASKVTVLLHQFV 367

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L RDG  +KMS R  +F+T+  ++D VG D +RF  + RK    L+FD      QS++N
Sbjct: 368 TLTRDGKQVKMSTRKANFVTVDELIDVVGEDVLRFFYMLRKADSQLEFDLDLATSQSQDN 427

Query: 450 PVFYVQYAYARCRSIFRQA--KDIFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           PV+YVQYA+AR  SI  Q+  + I P ++   L  R   P+       EL L+  L+ +P
Sbjct: 428 PVYYVQYAHARLCSILAQSGERGIVPAEVGSSLLQRLQEPE-------ELALLKTLSGFP 480

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE + +   P+K   YL + A  FH +++  +       V   + +L+  RL L+ A+
Sbjct: 481 AAIEGSALDLAPHKFIHYLMEFAGQFHSYYNKHK-------VITEDLELSQARLCLIQAL 533

Query: 567 ASIINSGLNIIGVESPNEM 585
              + +GL+IIG+ +P  M
Sbjct: 534 QLTLQNGLHIIGLTAPKSM 552


>gi|94309041|ref|YP_582251.1| arginyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123260476|sp|Q1LS94|SYR_RALME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|93352893|gb|ABF06982.1| Arginyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 602

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 196/595 (32%), Positives = 298/595 (50%), Gaps = 64/595 (10%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIA 84
           L  +  ERP+  AHG L+ N AM +++ L  +P  +A+ +V  +K D      V ++ IA
Sbjct: 27  LPAVTFERPKAAAHGDLACNIAMQVAKSLKTNPRELAQKVVDAVKADSRATALVAALEIA 86

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFINL LSP    ++L +++  G  YG   +G+  +V +EFVSANPTGP+HVGH R A
Sbjct: 87  GPGFINLRLSPEARAEVLRAVLADGDRYGARPVGEHGQVLVEFVSANPTGPLHVGHGRQA 146

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            +GD LA+L+A+ G+ V RE+Y NDAG QI+TLA+SV  R  + L   D+  PE  Y G 
Sbjct: 147 ALGDALANLLAWQGWSVHREFYYNDAGVQIHTLAISVQAR-ARGLKPGDAGWPESAYNGD 205

Query: 205 YLKHVGKE-LADKYSSELLNFPEEKW-----LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           Y+  +  + LA K  S     P         L  ++ ++V  +      DL+A  ++ D 
Sbjct: 206 YIADIAADFLAGKTVSASDGEPVTASGNIEDLESIRKFAVTYLRNEQDIDLQAFGVKFDR 265

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      +   + +L  +G  YE                    L  R+T  GD
Sbjct: 266 YYLESSLY--SDGRVEAAVQSLIAKGKTYE----------------SEGALWLRTTDDGD 307

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376
           D DR + K DG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A      +  
Sbjct: 308 DKDRVMKKGDGTYTYFVPDVAYHTTKWERGFSKVINVQGSDHHGTIARVRAGLQGLDIGI 367

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------------- 415
            +   + +L ++V + ++G  +K+SKRAG ++T+R +++                     
Sbjct: 368 PQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGEETIRGCLEAGVADWP 427

Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
                G D+VRF +L RK      FD     +Q+ ENPV+YVQYA+AR  SIF       
Sbjct: 428 AHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFEAWGGAD 487

Query: 473 PDLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            +          +   +  D S   + L   LAE+P ++  A+    P+ +AFYL DLA 
Sbjct: 488 WEARLGELASVDLAAVTAADVSPQAIALGRRLAEFPDMLAAASSELAPHAVAFYLRDLAG 547

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P  M
Sbjct: 548 DFHAFYNADR-------VLVDDETVKRARLALLAATRQVLKNGLAVIGVSAPQRM 595


>gi|255326255|ref|ZP_05367341.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296709|gb|EET76040.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 554

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 188/572 (32%), Positives = 292/572 (51%), Gaps = 53/572 (9%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           VE   L  + +ERP+   HG  +TN A+ L++ +G +P   A L+  +I   P V SV I
Sbjct: 26  VEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPREAAALLAEKISAIPGVASVDI 85

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+N+ L  +   ++ ++IV +G  YGR+    G  +N+EFVSANPTGP+H+G  R 
Sbjct: 86  AGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKTINLEFVSANPTGPIHLGGTRW 145

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A VGD LA ++   G  V REYY ND G QI+    S+    +        + PE  Y G
Sbjct: 146 AAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLIAAAR------GEETPEDGYAG 199

Query: 204 VYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            Y+  +  + LA +  +     PEE    I ++     M   I++ L A     D+F  E
Sbjct: 200 AYIVDIKDQILAQRPDALEAENPEE----IFREIGTHLMFDQIKESLAAFGTHFDVFFHE 255

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           +    G    +  +++ +   G ++E                       R+T  GDD DR
Sbjct: 256 NSVFEG--GKVDALLETMRENGQLFEA----------------DGAWWMRTTDYGDDKDR 297

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            ++KSDG++ Y A D+AY++ K  R     D  IY++G+DH+GYV RL+A+A  +  +  
Sbjct: 298 VVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGADHNGYVGRLKAIAQILGYRAD 357

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           QI V++ +LV L +DG P++MSKRAG  +TL  +V+ VG D+ R+ +        +D D 
Sbjct: 358 QIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGVDAARYELTRYSVDTPIDIDL 417

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--- 496
             +  +S ENPV+YVQYA+AR  ++ R A +              +  E   DTS L   
Sbjct: 418 GLLTSKSNENPVYYVQYAHARTAAVARNAAEAG------------VKVEDGVDTSLLDSA 465

Query: 497 ---QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
              +L+  L ++P  + +A    EP+++  YL  LAS +H  +   R  P+         
Sbjct: 466 ADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVSRVAPK---ADEEVT 522

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L   RL L +A   ++ +GLN++GV +P  M
Sbjct: 523 DLHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554


>gi|222100449|ref|YP_002535017.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572839|gb|ACM23651.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 549

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 287/558 (51%), Gaps = 43/558 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P     G LSTN AM L++ L  +P  IA+ I   +  D   D + + G GFIN +L
Sbjct: 29  IEVPPRKEFGDLSTNVAMKLAKQLKKNPREIAQEIAGLLIEDSVFDRIEVMGPGFINFFL 88

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S   L +++ +I+  G EYGR  +GKG K+  E+ SANPTGP  VGH R  V+GD L+ +
Sbjct: 89  SNEILHEVVKTILEQGEEYGRENVGKGLKIQFEYGSANPTGPFTVGHGRQIVIGDVLSEV 148

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+VTRE YINDAG QI  LA S++ RY + ++    ++PEG Y G YL  + KEL
Sbjct: 149 FKELGYDVTREMYINDAGKQIKLLAQSLWVRYNE-IFGVKMEIPEGGYRGEYLVDIAKEL 207

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      N   E+     K+ ++  ++  +++ L+ +    D++ SE      +   +
Sbjct: 208 ASEIGDRYKNVWNEEVEEFFKNAALDRILSSMKNTLERMGSSFDVYYSEMSLI--EDGTV 265

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +++  L  +  VYE                D    L  S  V +D D+ L++SDG+YTY
Sbjct: 266 EEVLRILKEKDLVYE---------------KDGALWLRVSKFVEED-DKVLVRSDGTYTY 309

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F  D+AY   KY RGF  +  + GSDH G++ R++A   A+       NV+L + V L R
Sbjct: 310 FMTDIAYHYKKYRRGFKRVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 369

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVR--FMMLWRKNSELLDFDFCKVKEQSKENPV 451
            G  ++MS RAG+FITL  ++DEVG D+ R  F M+   N  + D D  K K  + +NPV
Sbjct: 370 GGETVRMSTRAGEFITLDELLDEVGKDAARYFFAMVDPNNHMVFDIDLAKAK--TMDNPV 427

Query: 452 FYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +YVQYA+AR  ++F  A+    +     D DL            +  E  L+ +L  +  
Sbjct: 428 YYVQYAHARISNLFLNAEKKGVEFEQGKDLDLLG----------NEEERTLMRNLGMFSS 477

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++       P +L  YL  L+  FH  ++      +   V   N+ L+  RL L  A  
Sbjct: 478 ALKEVAKMFAPNRLTNYLQMLSESFHVFYT------KHVIVDPENKALSNARLNLALATK 531

Query: 568 SIINSGLNIIGVESPNEM 585
            ++  GL ++G+ +P  M
Sbjct: 532 IVLKKGLKLLGISAPERM 549


>gi|241661767|ref|YP_002980127.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240863794|gb|ACS61455.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 596

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 304/609 (49%), Gaps = 83/609 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDS 80
           E +    IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +
Sbjct: 23  EGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGKIADAIRADARGQRLVSA 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFINL LS +    +++++   G  YG      G  V +EFVSANPTGP+HVGH
Sbjct: 83  VEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPVLVEFVSANPTGPLHVGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV  R  +     D++ PE  
Sbjct: 143 GRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGYKPGDANWPEAA 201

Query: 201 YPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           Y G Y+  +      GK +       +    + + L  ++ ++V  +      DL+A  +
Sbjct: 202 YNGDYIADIAADYLAGKTVRASDGEPVTGERDVENLEAIRRFAVTYLRNEQDIDLQAFGV 261

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +  E   +      ++  +D L   G  YE                    L  R+T
Sbjct: 262 KFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE----------------QEGALWLRTT 303

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373
             GDD DR + KSDG+YTYF  D+AY   K+ RGF  +I V GSDH G + R+ A     
Sbjct: 304 DDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGL 363

Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV-- 417
            +   K   + +L ++V + +DG  +K+SKRAG ++T+R +             VD +  
Sbjct: 364 NIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRA 423

Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                          G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  
Sbjct: 424 CVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARIC 483

Query: 463 SIFRQAKDIFP------DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           S+F +A  + P      DL     P +V PQ +        L+  LA +P ++ +A    
Sbjct: 484 SVFERAG-VDPASLTNADLAAVTGP-DVSPQAT-------ALVQRLAAFPDMLADAAREL 534

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +
Sbjct: 535 APHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLTV 587

Query: 577 IGVESPNEM 585
           IGV +P +M
Sbjct: 588 IGVSAPQKM 596


>gi|283458341|ref|YP_003362963.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134378|dbj|BAI65143.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 554

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 188/572 (32%), Positives = 293/572 (51%), Gaps = 53/572 (9%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           VE   L  + +ERP+   HG  +TN A+ L++ +G +P  +A L+  +I     V SV I
Sbjct: 26  VEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPREVAALLAEKIGAIAGVASVDI 85

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GF+N+ L  +   ++ ++IV +G  YGR+    G  +N+EFVSANPTGP+H+G  R 
Sbjct: 86  AGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKTINLEFVSANPTGPIHLGGTRW 145

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A VGD LA ++   G  V REYY ND G QI+    S+    +        + PE  Y G
Sbjct: 146 AAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLIAAAR------GEETPEDGYAG 199

Query: 204 VYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            Y+  +  + LA +  +     PEE    I ++     M   I++ L A     D+F  E
Sbjct: 200 AYIVDIKDQILAQRPDALEAENPEE----IFREIGTHLMFDQIKESLAAFGTHFDVFFHE 255

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           +    G    +  ++D +   G ++E                       R+T  GDD DR
Sbjct: 256 NSVFEG--GKVDALLDAMRENGQLFEA----------------DGAWWMRTTDYGDDKDR 297

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            ++KSDG++ Y A D+AY++ K  R     D  IY++G+DH+GYV RL+A+A  +  +  
Sbjct: 298 VVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGADHNGYVGRLKAIAQILGYRAD 357

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           QI V++ +LV L +DG P++MSKRAG  +TL  +V+ VG D+ R+ +        +D D 
Sbjct: 358 QIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGVDAARYELTRYSVDTPIDIDL 417

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--- 496
             +  +S ENPV+YVQYA+AR  ++ R A +              +  E   DTS L   
Sbjct: 418 GLLTSKSNENPVYYVQYAHARTAAVARNAAEAG------------VKVEDGVDTSLLDSA 465

Query: 497 ---QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
              +L+  L ++P  + +A    EP+++  YL  LAS +H  +   R  P+      +  
Sbjct: 466 ADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVSRVTPKADEAVTD-- 523

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L   RL L +A   ++ +GLN++GV +P  M
Sbjct: 524 -LHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554


>gi|331001441|ref|ZP_08325059.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329568170|gb|EGG49987.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 581

 Score =  293 bits (751), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 191/577 (33%), Positives = 301/577 (52%), Gaps = 53/577 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGK 86
           +IV+ERP+  +HG ++   A+  ++ +   P  IAE +V  ++ +     +F    IAG 
Sbjct: 27  KIVLERPKQQSHGDIACTVALQCAKAMKQPPRVIAEKLVEELRKETADSEMFSAIEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFINL L+P   + ++  I+  G  YG +    G  + +E+VSANPTGP+H+GH R   +
Sbjct: 87  GFINLKLAPFLKQDVVREILKEGPAYGCSDAHTGESILLEYVSANPTGPLHLGHARQGAL 146

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD L+ ++   G+ VTRE+Y NDAG QI+ LA+SV  R  + L N   + PE  Y G Y+
Sbjct: 147 GDVLSRMLKSQGWAVTREFYYNDAGNQIHNLAISVQARCYE-LQNKPFEFPEDGYKGAYV 205

Query: 207 KHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             + ++          D    E    P++  L  ++ Y+V  + +    DL AL +  D 
Sbjct: 206 LDIAQDFLAKKPIHTFDGKVVESSGNPDD--LENIRAYAVAYLREEQHKDLTALGVAFDN 263

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      +   +  +   G  YE                DR  L F+ST  GD
Sbjct: 264 YYLESSLY--SDGRVAKAVQAIRNAGKTYE---------------KDRA-LWFKSTDYGD 305

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK- 377
           D DR + K+DGSYTYF  D+AY   K+ERGF+  + + GSDH G V R+ A   A S   
Sbjct: 306 DKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRALNIQGSDHHGTVARVRAGIQAASGDF 365

Query: 378 -----KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                K     +L +++++ +DG P+KMSKR+G ++TL  +V+ VG D+ R  M+ R+  
Sbjct: 366 GFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGTYVTLSDLVNWVGKDAARLFMVNRRAD 425

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQES 489
               FD      QS ENPV+Y+QYA+AR  S+F QA++     P ++ ++   ++    S
Sbjct: 426 AEFVFDVDLALSQSDENPVYYLQYAHARICSVFAQAQEKGIEVPSVE-EMASEDL---SS 481

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               +EL+L+  L+++P  + N T    P  L  YL +LA+ FH  ++  R       V 
Sbjct: 482 LTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLKELAADFHSFYNAER-------VL 534

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            ++ KL   RL L+ A   ++ +GL I+GV +P  +S
Sbjct: 535 VDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571


>gi|171060897|ref|YP_001793246.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689094|sp|B1XYP5|SYR_LEPCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170778342|gb|ACB36481.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 561

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 191/571 (33%), Positives = 301/571 (52%), Gaps = 55/571 (9%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGF 88
             E P+  AHG L+  AAM L+RPL  +P  +A+ +V  +   P     VD++ +AG GF
Sbjct: 28  AFENPKQAAHGDLAITAAMQLARPLRKNPRELAQALVEALGRQPAAQKWVDAMELAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL L P+  ++++S+++     +G      G +V +EFVSANPTGP+HVGH R A +GD
Sbjct: 88  INLRLKPAARQQVVSAVLSQREGFGVRAP-NGQRVMVEFVSANPTGPLHVGHGRQAALGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            + ++ A  G+ V RE+Y NDAG QI TLA S   R  + L   D++ P   Y G Y+  
Sbjct: 147 AICNVFATQGWAVHREFYYNDAGVQIGTLASSTQCRL-RGLKPGDAEWPASAYNGDYIAD 205

Query: 209 VGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           + +E        AD  +       E+  +  ++ ++V  +      DL+A  ++ D +  
Sbjct: 206 IAREFLAGATVKADDRAFTASGEVED--IDSIRQFAVAYLRHEQDLDLQAFGVRFDHYYL 263

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      + + +  L   G  +E                +   L  RST  GDD D
Sbjct: 264 ESGLY--SSGRVEEAVAKLTAAGKTFE----------------EGGALWLRSTDYGDDKD 305

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + KSDG+YTYF  D+AY   K+ERGFD +I + GSDH G + R+ A   AA V   + 
Sbjct: 306 RVMKKSDGTYTYFVPDVAYHIHKWERGFDKVINIQGSDHHGTIARVRAGLQAAGVGVPQG 365

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
             + +L ++V + + G  +K+SKRAG ++TLR ++D    D+VRF ++ RK      FD 
Sbjct: 366 WPDYVLHKMVTVMKGGEEVKISKRAGSYVTLRDLIDWTSRDAVRFFLISRKADTEFVFDV 425

Query: 440 CKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTS 494
               + + ENPV+YVQYA+AR C  + R  ++   DL    D DL   +++ + +EF   
Sbjct: 426 DLALKANDENPVYYVQYAHARVCSVLARYVEEHQGDLATLADADL---SLLAEPTEF--- 479

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L+  LAEYP ++  A     P+ +AFYL DLA+ +H ++        +RF+      
Sbjct: 480 --ALMNKLAEYPEMLGAAAADLAPHNVAFYLRDLAAHYHSYYG------AVRFLDGAVEP 531

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   R+ L+ A A ++ + L ++GV +P +M
Sbjct: 532 MR-ARMALLEATAQVLRNALAVLGVSAPRKM 561


>gi|303256429|ref|ZP_07342443.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859920|gb|EFL82997.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 581

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 191/577 (33%), Positives = 301/577 (52%), Gaps = 53/577 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGK 86
           +IV+ERP+  +HG ++   A+  ++ +   P  IAE +V  ++ +     +F    IAG 
Sbjct: 27  KIVLERPKQQSHGDIACTVALQCAKAMKQPPRVIAEKLVEELRKETADSEMFSAIEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFINL L+P   + ++  I+  G  YG +    G  + +E+VSANPTGP+H+GH R   +
Sbjct: 87  GFINLKLAPFLKQDVVREILKEGPAYGCSDAHTGESILLEYVSANPTGPLHLGHARQGAL 146

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD L+ ++   G+ VTRE+Y NDAG QI+ LA+SV  R  + L N   + PE  Y G Y+
Sbjct: 147 GDVLSRMLKSQGWAVTREFYYNDAGNQIHNLAISVQARCYE-LQNKPFEFPEDGYKGAYV 205

Query: 207 KHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             + ++          D    E    P++  L  ++ Y+V  + +    DL AL +  D 
Sbjct: 206 LDIAQDFLAKEPIHTFDGKVVESSGNPDD--LENIRAYAVAYLREEQHKDLTALGVAFDN 263

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      +   +  +   G  YE                DR  L F+ST  GD
Sbjct: 264 YYLESSLY--SDGRVAKAVQAIRNAGKTYE---------------KDRA-LWFKSTDYGD 305

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK- 377
           D DR + K+DGSYTYF  D+AY   K+ERGF+  + + GSDH G V R+ A   A S   
Sbjct: 306 DKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRALNIQGSDHHGTVARVRAGIQAASGDF 365

Query: 378 -----KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                K     +L +++++ +DG P+KMSKR+G ++TL  +V+ VG D+ R  M+ R+  
Sbjct: 366 GFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGTYVTLSDLVNWVGKDAARLFMVNRRAD 425

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQES 489
               FD      QS ENPV+Y+QYA+AR  S+F QA++     P ++ ++   ++    S
Sbjct: 426 AEFVFDVDLALSQSDENPVYYLQYAHARICSVFAQAQEKGIEVPSVE-EMASEDL---SS 481

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               +EL+L+  L+++P  + N T    P  L  YL +LA+ FH  ++  R       V 
Sbjct: 482 LTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLKELAADFHSFYNAER-------VL 534

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            ++ KL   RL L+ A   ++ +GL I+GV +P  +S
Sbjct: 535 VDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571


>gi|254283249|ref|ZP_04958217.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219679452|gb|EED35801.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 561

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 293/566 (51%), Gaps = 50/566 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P+D +HG  +TN AM+L++  G+ P   A+ ++  +  +  ++   IAG GFIN  L
Sbjct: 32  IEHPKDPSHGDFATNLAMVLAKRAGMPPREFAQRLIDALPDNSLIEGTEIAGPGFINFRL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S +    ++  I+  G EYG     +  KV +EFVSANPTGP+HVGH R A +GD+L+ L
Sbjct: 92  SQASNTGVIREILTQGAEYGYQRHTRRGKVQVEFVSANPTGPLHVGHGRGAAIGDSLSRL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG--- 210
           +  +G++V RE+Y NDAG QI+ LALSV  R  + L   +++ P+  Y G Y+  +    
Sbjct: 152 LTATGWDVHREFYYNDAGQQISNLALSVQAR-AKGLTPENANWPDDGYRGEYIADLADAF 210

Query: 211 --KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
             KE       E+    +   L  ++ ++V  + +    DLKA  +Q D +  E   + G
Sbjct: 211 LKKEAVAAADREVAANGDSDDLDNIRAFAVAWLRREQDADLKAFGVQFDEYFLESSLYDG 270

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +  +++ L   G+ YE                    L  RST  GDD DR + K +
Sbjct: 271 --GEVDRVVEELTINGHTYE----------------QDGALWLRSTEFGDDKDRVMRKRE 312

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAVSEKKAQINVL 384
           G YTYF  D+AY + K+ RG+  +I   G+DH   + R    L+ + A + +   +   +
Sbjct: 313 GGYTYFVPDVAYHRNKWRRGYQRVINEQGADHHSTITRVRAGLQGLDAGIPDGWPEY--V 370

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V + RDG  +K+SKRAG ++TL  ++D VG D+ RF +  R  +  L FD    + 
Sbjct: 371 LHQMVTVMRDGAEVKLSKRAGSYVTLSDLIDWVGRDATRFFLTARAATSQLTFDIDLARS 430

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-ESEFDTSELQLIVHLA 503
           QS ENPV+Y+QYA+AR  S+ R+A+   PD      P + +   ++  +   L L + L+
Sbjct: 431 QSNENPVYYIQYAHARVCSVERKARQQDPDWT----PTDGLESLDTLIEPEALALALTLS 486

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMR 559
            +P V+  A    EP+ +A YL  +A  FH  ++  +    E P           +   R
Sbjct: 487 RFPEVVSTAAERLEPHDIANYLRGVAGEFHSFYNAHKMLDAEPP-----------VARAR 535

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   +I +GL ++GV +P  M
Sbjct: 536 LALADATRQVIANGLALLGVSAPESM 561


>gi|294341477|emb|CAZ89894.1| putative arginyl-tRNA synthetase (ArgS) [Thiomonas sp. 3As]
          Length = 584

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 200/627 (31%), Positives = 310/627 (49%), Gaps = 92/627 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F++RL   L++    ++ E    D I + RPR   HG L++N AM L++PL  +P  +A
Sbjct: 3   EFTARLTTALQQAATALQPE--FSDSIELSRPRSDDHGELASNLAMQLAKPLKRNPRDVA 60

Query: 66  ELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + I+  ++ + D    +    IAG GFIN +L P+ L++++  +     ++G +  G+  
Sbjct: 61  QQIIDALRTNADLAEGIARTEIAGPGFINFHLHPAVLQQVIVEVEQGAAKFGHSRAGREQ 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +EFVSANPTGP+HVGH R   +GD +A+++   G+ V RE+Y NDAG QI TLALSV
Sbjct: 121 PMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R  +     D+  PE  Y G Y+  + +   D  + E  + P+++  PIV +     +
Sbjct: 181 QAR-ARGYKPGDAQWPESAYNGDYIADIAR---DFLACE--SVPDDQGQPIVANGQADDL 234

Query: 242 MKIIR-----------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             I R            DLK   I+ D +  E   +      + D +  L   G+ YE  
Sbjct: 235 DNIRRFAVAYLRREQDLDLKTFGIRFDNYYLESSLY--TDGRVEDAVQRLQASGHTYE-- 290

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             L  R+T  GDD DR + KSDG+YTYF  D+AY   K++RGF 
Sbjct: 291 --------------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFH 336

Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             + + GSDH G + R+ A   A  +       + +L ++V + R G  +K+SKRAG ++
Sbjct: 337 RAVNIQGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYV 396

Query: 409 TLRHVVD------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           T+R +++                  + G D+VRF ++ RK      FD      QS ENP
Sbjct: 397 TVRDLIEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENP 456

Query: 451 VFYVQYAYARCRSIFRQAKDIFP------------DLDFDLFPRNVIPQESEFDTSELQL 498
           V+YVQYA+AR  S+F Q     P            DL   + PR            E  L
Sbjct: 457 VYYVQYAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPR------------ERAL 504

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + LA YP+V+  A     P+++AFYL DLA+ FH  ++  R       V  +   L   
Sbjct: 505 QLTLARYPQVLAAAAQELAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHA 557

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL+L+ AV  ++++ L ++GV +P  M
Sbjct: 558 RLRLLRAVRQVMHNALAVLGVSAPQRM 584


>gi|300933603|ref|ZP_07148859.1| arginyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 554

 Score =  293 bits (750), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 181/554 (32%), Positives = 279/554 (50%), Gaps = 33/554 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR+  HG  +TN AM +++  G +P      +   +     +D   +AG GFIN+ 
Sbjct: 33  TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAAEGIDEATVAGPGFINIR 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+     KI++ I+ +G  YG+     G K+N+EFVSANPTGP+H+G  R A VGD+L  
Sbjct: 93  LAADAQGKIVTDILNAGENYGQGDEFAGKKINLEFVSANPTGPVHLGGTRWAAVGDSLGR 152

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++   G EVTREYY ND G QI+  A S+    +          PE  Y G Y++ +  +
Sbjct: 153 ILTKRGAEVTREYYFNDHGTQIDRFARSLVAAAKG------QPTPEDGYGGDYIQDIANQ 206

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +   +     N  EE      +   V+ M   I+  L     + D++  E+     +   
Sbjct: 207 ITSAHEG-WENKSEEDLHEFFRAEGVELMFAHIKRTLAEFGTEFDVYFHENSLF--ESGA 263

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   I  L   G +YE                       R++  GDD DR ++KSDG   
Sbjct: 264 VDKAIQTLKSNGNLYE----------------SEGAWWLRASNFGDDKDRVVIKSDGDAA 307

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+AY   K +RG D  IY++G+DH GY+ RL+A AAA+     Q+ V++ ++V L 
Sbjct: 308 YIAGDIAYIADKIDRGHDLCIYMLGADHHGYIARLKAAAAALGYDPDQVEVMIGQMVNLV 367

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +DG  ++MSKRAG  ITL  +V+ +G D+ R+ ++       LD D      QS +NPVF
Sbjct: 368 KDGKAVRMSKRAGTVITLDDLVELIGVDAARYALIRSSVDSSLDIDMNLWASQSNDNPVF 427

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+A +    + +D    +++  E E D     LI  L E+P VI  A
Sbjct: 428 YVQYGHARLSSIARKADE--AGVTYDGADMSLLTHEREGD-----LIRTLGEFPEVIATA 480

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL-RFVQANNRKLTMMRLQLVHAVASIIN 571
              +EP+++A Y   LA  FH  +   +  P+  +   ++  ++   RL L  A    + 
Sbjct: 481 AELREPHRIARYAEHLAGTFHRFYDACQILPKADQPTGSDADEVFRSRLALAAATRQTLA 540

Query: 572 SGLNIIGVESPNEM 585
           + L ++GV +P  M
Sbjct: 541 NALALVGVSAPERM 554


>gi|260222579|emb|CBA32280.1| Arginyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 565

 Score =  293 bits (750), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 186/575 (32%), Positives = 296/575 (51%), Gaps = 55/575 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           +   E P+  AHG  +T AAM L++PL ++P  +AE +   +   P     V  + IAG 
Sbjct: 26  KAAFESPKVAAHGDFATTAAMQLAKPLKMNPRQLAETLRGELLATPVYQRWVQDIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ L P+  ++++  ++  G  +G      G  V +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFINIRLKPAAKQEVVREVLGQGARFGYQ-PESGKPVLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLPE--G 199
           GD + +L A  GY+V RE+Y NDAG QI+TL  S   R +      + +  D D PE   
Sbjct: 145 GDAICNLFATQGYKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDSCWPTDPDNPESKA 204

Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y+  + +    K S      E     +      ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIADIAEAFKAKASIKADDREFTANGDVDDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E   +      +   ++ L   G  YE                    L  +ST
Sbjct: 265 HFDQYYLESSLYTS--GRVDAAVNKLVGNGKTYE----------------QDGALWLKST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372
             GDD DR + K DGSYTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   AA
Sbjct: 307 DYGDDKDRVMRKKDGSYTYFVPDVAYHIAKWERGFAKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V   +   + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
               FD     +++ +NPV+YVQYA+AR C  +     D+      DL         S  
Sbjct: 427 TEYTFDVDLAVQKNNDNPVYYVQYAHARICSVLASWGGDVAALKGVDL---------SAL 477

Query: 492 DTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
           ++S+ Q L++ LA++P ++  AT  + P+ + FYL +LA+ +H ++   R       +  
Sbjct: 478 ESSQAQALMLLLAKFPEMLTAATEGEAPHDVTFYLRELAASYHSYYDAER-------ILV 530

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  + + RL LV A A ++++GL ++GV +P +M
Sbjct: 531 DDEAVKLARLALVAATAQVLHNGLAVLGVSAPQKM 565


>gi|315925515|ref|ZP_07921725.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621056|gb|EFV01027.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 563

 Score =  293 bits (750), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 194/566 (34%), Positives = 292/566 (51%), Gaps = 44/566 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87
           L  I +E PR+   G  +TN AM L     + P  IAE IV         V  V IAG G
Sbjct: 33  LPAIQLEVPREAQFGDYATNVAMQLPGQAHMAPRAIAEAIVGHFDAAAAYVQDVTIAGPG 92

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN  L P++  +++  I   G +YGR     G   N+EFVSANPTGPMH+G+ R   +G
Sbjct: 93  FINFALDPTWHYEVIGEIEAKGADYGRTTGNAGKTYNLEFVSANPTGPMHMGNARGGAIG 152

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA + A++GY+VTRE+Y+NDAG QI     S+  R++Q L   D   PE  Y G  ++
Sbjct: 153 DVLAEIAAWTGYDVTREFYVNDAGNQIAKFGDSLDARFRQ-LLGEDIPFPEDGYQGADIR 211

Query: 208 -HVGKELADKYSSE----LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            H+ + +A+         LL+   E    +  DY+++  ++ +  D+++  + +D++ SE
Sbjct: 212 AHMEEYIAENGGKAAVRPLLDRTPETRKALFVDYALKKNLRQMHADMESYGVDYDVWFSE 271

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  D   I   +  L  +G  Y+      K   T           F++T  G + D 
Sbjct: 272 QSMY--DDGEIERALKLLKDKGATYD------KEGAT----------WFKTTDYGCEKDD 313

Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            L++ +G  TYF  D+AY   K   RGFD  + V G+DH G++ RL+A  AA     +++
Sbjct: 314 VLIRQNGLPTYFMGDIAYHLNKLLTRGFDRAVNVWGADHHGHIARLKAAIAAAGVDASRL 373

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            ++  +LVRL RDG P++MSKR G  I L  ++D VG D+ R     R      DFD   
Sbjct: 374 EIVTMQLVRLIRDGEPVRMSKRQGKAIGLTELLDMVGIDAARVFFNLRSPDSHFDFDLDL 433

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLI 499
              QS +NPVFYVQYA+AR  SI RQ   +  D+D         P + E  T+  EL+L+
Sbjct: 434 AIRQSNDNPVFYVQYAHARIASILRQ---LGGDVDL------AAPAKLELLTNPKELELL 484

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L+++P  I  A    +P ++  Y   LAS FH  ++  R       V+ ++  L   R
Sbjct: 485 SVLSDFPETIVAAEHKMDPSRMVHYAQRLASAFHTFYNECR-------VRVDDADLMHAR 537

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L+ A   ++ + L I+GV++P  M
Sbjct: 538 LKLILACRQVLENVLGILGVDAPEAM 563


>gi|93007063|ref|YP_581500.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|109895023|sp|Q1Q8I7|SYR_PSYCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|92394741|gb|ABE76016.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 609

 Score =  293 bits (749), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 191/604 (31%), Positives = 304/604 (50%), Gaps = 82/604 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I R +D +HG  ++N A+  ++    +P  +AE IV  +  + D+  + IAG GFIN++L
Sbjct: 36  ITRTKDTSHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDIRQIEIAGPGFINVFL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I      +G +    G K+ +EFVSANPT  +HVGH R A  G ++++L
Sbjct: 96  NTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNL 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212
           +   GY+VTREYY+NDAG Q++ LA S + RY +   N ++   P   Y G Y+  + + 
Sbjct: 156 LEAIGYDVTREYYVNDAGRQMDILATSTYLRYLET--NGETVTFPVNGYQGDYVSDIAQT 213

Query: 213 L----ADKYSSELL----NFPEEKWLPIVKD----------------------------- 235
           L    AD Y         N PE+    I  D                             
Sbjct: 214 LKTQHADTYVHRFADIAENVPEDAQFEINADGEKVLLSGDKEAHIDGLIANSKALLGNGY 273

Query: 236 -----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                 ++ +++  I+DDL    + ++ + SE    R   S I  ++  L  +GY+YE  
Sbjct: 274 ELFLNAALSSILADIKDDLNDFGVSYECWFSE----RSIDSEIEPVLQILEDKGYLYE-- 327

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             + F+ST  GD+ DR + +++G  TYFA+D+AY K K++RGFD
Sbjct: 328 --------------KDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFD 373

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++ V G+DH GYV R++A   A+     +++V+L + V L+R    ++MS R+G F+TL
Sbjct: 374 KVVNVWGADHHGYVPRVKAALLALGIDADRLDVVLVQFVALWRGDEKVQMSSRSGKFVTL 433

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +  EVG+D+ RF  + RK    +DFD    K QSK+N V+Y+QYA+AR   +  + + 
Sbjct: 434 RELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYAHARVCRVLEKLET 493

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               +D  +       QE     SE +LI  LA YP  +  +    EP+ L  YL +LA+
Sbjct: 494 SGLSVDDAI---GAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHILTNYLKELAA 550

Query: 531 VFHGHWSHGR---------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           +FHG +   R         E P      A+   +   RL+L  AV  +I++GL ++G+ +
Sbjct: 551 LFHGWYDSNRILPVSLTSGETP-----SADEMAMMQARLRLSKAVRQVISNGLGLLGLSA 605

Query: 582 PNEM 585
           P+ M
Sbjct: 606 PSSM 609


>gi|187927245|ref|YP_001897732.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309780055|ref|ZP_07674808.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|238691829|sp|B2UDW0|SYR_RALPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187724135|gb|ACD25300.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308921225|gb|EFP66869.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 596

 Score =  292 bits (748), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 201/607 (33%), Positives = 302/607 (49%), Gaps = 79/607 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDS 80
           E +    IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +
Sbjct: 23  EGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGKIADAIRADARGQRLVAA 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GFINL LS +    +++++   G  YG      G  V +EFVSANPTGP+HVGH
Sbjct: 83  VEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPVLVEFVSANPTGPLHVGH 142

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV  R  +     D++ PE  
Sbjct: 143 GRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGYKPGDANWPEAA 201

Query: 201 YPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           Y G Y+  +      GK +       +    + + +  ++ ++V  +      DL+A  +
Sbjct: 202 YNGDYIADIAADYLAGKTVRASDGEPVTGERDVENIEAIRRFAVTYLRNEQDIDLQAFGV 261

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +  E   +      ++  +D L   G  YE                    L  R+T
Sbjct: 262 KFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE----------------QEGALWLRTT 303

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373
             GDD DR + KSDG+YTYF  D+AY   K+ RGF  +I V GSDH G + R+ A     
Sbjct: 304 DDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGL 363

Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV-- 417
            +   K   + +L ++V + +DG  +K+SKRAG ++T+R +             VD +  
Sbjct: 364 NIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRA 423

Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                          G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  
Sbjct: 424 CVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARIC 483

Query: 463 SIFRQAK-DIFPDLDFDLFP---RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           S+F +A  D       DL      +V PQ +        L+  LA +P ++ +A     P
Sbjct: 484 SVFERAGVDAASLTSADLAAVTGPDVSPQATA-------LVQRLAAFPDMLADAARELAP 536

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IG
Sbjct: 537 HAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIG 589

Query: 579 VESPNEM 585
           V +P +M
Sbjct: 590 VSAPQKM 596


>gi|33591373|ref|NP_879017.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33571015|emb|CAE40495.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332380774|gb|AEE65621.1| arginyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 595

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 184/574 (32%), Positives = 300/574 (52%), Gaps = 59/574 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGK 86
           ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P    +     IAG 
Sbjct: 62  QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 121

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  L+P+  + ++ ++      YGR     G KV +EFVSANPTGP+HVGH R A +
Sbjct: 122 GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 180

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R  + +  +  D P   Y G Y+
Sbjct: 181 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPADGYKGDYI 239

Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             + ++ A + S +      +    +   L  ++ ++V  + +    DL+A  +  D + 
Sbjct: 240 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 299

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318
            E   +      +++ +D L  +G+ YE                +   L  R+T +  GD
Sbjct: 300 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 341

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR + KS+G YTYF  D+AY K K+ERGF + + + GSDH G V R+ A    ++   
Sbjct: 342 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVARVRAGLQGLAGIP 401

Query: 379 AQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                 +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+      F
Sbjct: 402 KDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 461

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT---- 493
           D      +S ENPV+Y+QYA+AR  ++   +     ++             ++ DT    
Sbjct: 462 DIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADTALLT 508

Query: 494 --SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  ++  R       V  +
Sbjct: 509 APSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER-------VLVD 561

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 562 EPALKLARLRLAATTRQVLANGLALLGVSAPDRM 595


>gi|50954431|ref|YP_061719.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657984|sp|Q6AG81|SYR_LEIXX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50950913|gb|AAT88614.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 562

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 183/558 (32%), Positives = 289/558 (51%), Gaps = 37/558 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERP++  HG  S+N AM L++  G +P  +A  I         V S  +AG GFIN 
Sbjct: 38  VPLERPKNRGHGDWSSNVAMRLAKKAGANPRELAAEIAEAAAGIDGVASAEVAGPGFINF 97

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L  +   ++  +I+ +G  YG   +  G  VN+EFVSANPTGP+H+G  R A VGD+LA
Sbjct: 98  RLEAAAAGQLARTILEAGAAYGTGDLYDGLLVNLEFVSANPTGPIHLGGARWAAVGDSLA 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G +VTREYY ND G+QI+  A S+      A +  ++  PE  Y G Y+  +  
Sbjct: 158 RILQAEGADVTREYYFNDHGSQIDRFARSLL-----AAHRGEA-TPEDGYGGGYIGEIAA 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A  Y  +L     +    + +      M + I+D L +  +  D++  ED  H     
Sbjct: 212 KVAAGYDGDLAALSRDDQQEVFRSAGTALMFQEIKDRLHSFGVDFDVYFHEDSLHA--SG 269

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   I  L   G+++E                +   +  R+T  GDD DR +++S+G  
Sbjct: 270 AVERAIRRLDELGHIFE----------------EDGAVWLRTTAFGDDRDRVIVRSNGEP 313

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVR 390
            Y + DL Y+  K ERGF+  I ++G+DH GY+ RL A+  A  +     + +L+ ++V 
Sbjct: 314 AYISGDLGYYLDKRERGFEQNIIMLGADHHGYIGRLMAMVEAFGDIPNVNLQILIGQMVN 373

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG P+KMSKRAG  +TL  +VD VG D+ R+ ++       LD D   + ++S ENP
Sbjct: 374 LVRDGEPVKMSKRAGTIVTLDDLVDAVGVDAARYALVRSSTDSQLDVDLDLLAKRSNENP 433

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR RS+   A+     +D   F   ++  E+E       L+  L E+PRV+ 
Sbjct: 434 VYYVQYAHARTRSVAANAER--AGVDRSAFKPELLTHETES-----ALLGGLQEFPRVVA 486

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVHAVA 567
            A    EP+++A  + +LA ++H  W   R+    R +      +T     RL L  A  
Sbjct: 487 QAAELSEPHRVARSIEELAGLYHA-WYAVRDGS-TRVIPLGEEPVTDAHRTRLWLNDATG 544

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++GV +P  M
Sbjct: 545 QVLRNGLRLVGVSAPERM 562


>gi|307720328|ref|YP_003891468.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978421|gb|ADN08456.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 531

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 186/570 (32%), Positives = 303/570 (53%), Gaps = 58/570 (10%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           + +KI   +V+E+PRD + GH +T  A  L++ L   P+ IA+ + +  +   DV S   
Sbjct: 9   LREKIGREVVLEKPRDRSFGHFATPIAFSLAKELRKSPMVIADELASSFE-SSDVFSKVE 67

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           A KG++N  LS  +L +  S  + +  E+      K  K+ +EFVSANPTGP+H+GH R 
Sbjct: 68  AVKGYLNFRLSEDFLAEYASWALKNPSEFATQ--EKNQKILLEFVSANPTGPLHIGHARG 125

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV GDTL  +    GY++T EYY+NDAG QI+ L LS+    +  L +   + PE YY G
Sbjct: 126 AVYGDTLYRMAKHLGYDITAEYYVNDAGNQIDLLGLSIQLHARDNLLDETVEYPESYYRG 185

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE- 262
            YL  + +++ +K+ SE+  F +E     +  ++   +MKII  DL  LNI  D F+ E 
Sbjct: 186 EYLDALARDVMEKFGSEI--FYDESRQRELALWAKDEVMKIIAKDLGDLNIFFDTFVYES 243

Query: 263 ---DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
              DD+ R        ++  +    Y  +G                  ++   S   GD+
Sbjct: 244 TLYDDWDR--------VMKKMGSGIYEKDG------------------KIWIASEAKGDE 277

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR +++ DG  TY A D+ Y   K+ERG+D+ I + G+DH GY+ R++A    +     
Sbjct: 278 KDRVVVREDGRPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIPRVKAAIEYLGYDSN 337

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ VLL ++V L +DG P KMSKRAG+ I +  +V+E+G+D++RF+   +K+   L+FD 
Sbjct: 338 KLEVLLSQMVSLLKDGEPYKMSKRAGNVILMSDIVEEIGADALRFIFASKKSDTALEFDL 397

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            + K+Q   NP+FY+QYA+AR +++  +A   K+   +        N        DT   
Sbjct: 398 AEFKKQDSSNPIFYIQYAHARIQTLLSKATLTKEDIANASLKNLGENA-------DT--- 447

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+      P VIE+A   ++  KL  YL  LA+  H  +   R       +     +  
Sbjct: 448 -LLFDALLLPEVIEDAFNTRQVQKLTDYLKSLAASLHKFYYDVR-------MIGTEDEAK 499

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           +++L L+  VA  I +GL+++G+++ ++MS
Sbjct: 500 LLKLMLM--VALSIKTGLSLMGIDAKDKMS 527


>gi|39932124|sp|Q7W0K0|SYR_BORPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 560

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 184/574 (32%), Positives = 300/574 (52%), Gaps = 59/574 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P     +    IAG 
Sbjct: 27  QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  L+P+  + ++ ++      YGR     G KV +EFVSANPTGP+HVGH R A +
Sbjct: 87  GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R  + +  +  D P   Y G Y+
Sbjct: 146 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPADGYKGDYI 204

Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             + ++ A + S +      +    +   L  ++ ++V  + +    DL+A  +  D + 
Sbjct: 205 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 264

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318
            E   +      +++ +D L  +G+ YE                +   L  R+T +  GD
Sbjct: 265 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 306

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR + KS+G YTYF  D+AY K K+ERGF + + + GSDH G V R+ A    ++   
Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVARVRAGLQGLAGIP 366

Query: 379 AQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                 +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+      F
Sbjct: 367 KDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 426

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT---- 493
           D      +S ENPV+Y+QYA+AR  ++   +     ++             ++ DT    
Sbjct: 427 DIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADTALLT 473

Query: 494 --SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  ++  R       V  +
Sbjct: 474 APSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER-------VLVD 526

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 527 EPALKLARLRLAATTRQVLANGLALLGVSAPDRM 560


>gi|332977286|gb|EGK14077.1| arginine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 609

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 197/603 (32%), Positives = 307/603 (50%), Gaps = 80/603 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFIN 90
           I R +   HG  ++N A+  ++    +P  +AE ++A +   PD DS+    +AG GFIN
Sbjct: 36  ITRSKSPEHGDYASNIALTAAKAAKSNPRALAEQLIAAL---PDNDSIAKLEVAGPGFIN 92

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L+      +L +I  +   YG        K+ +EFVSANPT  +HVGH R A  G ++
Sbjct: 93  IFLNTGAKFAVLDAIFDNNERYGLTDEFSDKKIQVEFVSANPTSSLHVGHGRGAAFGMSV 152

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+   GY+VTREYY+NDAG Q++ LA S + RY + L       P G Y G Y+  + 
Sbjct: 153 ANLLEAVGYKVTREYYVNDAGRQMDILAASTYLRYLE-LNGEQVHFPVGGYQGDYVTDIA 211

Query: 211 KELADK--------YSSELLNFPEEKWLPIVKD-------------------YSVQAM-- 241
           + +  +        Y+    N PE+       D                    S QA+  
Sbjct: 212 QTIKTQQADAYVHPYAEISANVPEDAVFETNADGEQELVSGDKNAHVDGIIANSKQALGD 271

Query: 242 -------------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                        ++ I+DDL    ++ + + SE          I  ++  L  +GY+YE
Sbjct: 272 NYEIFLNAALSEILEDIKDDLNDFGVRFERWFSEKSI----ADEIEPVLAELESKGYLYE 327

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                 K   T           FRST  GD+ DR + +++G  TYFA+D+AY K K+ERG
Sbjct: 328 ------KDGNT----------WFRSTDFGDEKDRVVRRANGLTTYFASDIAYHKNKFERG 371

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           FD +I V G+DH GY+ R+ A   A+   + ++ V+L + V L+R    I+MS R+G F+
Sbjct: 372 FDTVINVWGADHHGYIARVRAALTALGIDEKRLEVILVQFVALWRGEEKIQMSSRSGKFV 431

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467
           TLR + +EVG+D+ RF  + RK    +DFD    K QSK+N V+Y+QYA+AR  S+  + 
Sbjct: 432 TLRELREEVGNDAARFYYVARKPEVHIDFDLELAKSQSKDNAVYYIQYAHARVCSVLEKL 491

Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            AK    D       +N++  E+E      +LI  LA YP  ++ A    +P+ L  YL 
Sbjct: 492 NAKGFNVDDAQGKAMQNLLQAEAES-----ELIKLLAAYPATLKRAATGYDPHVLTNYLK 546

Query: 527 DLASVFHGHWSHGRENPR--LRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESP 582
           DLAS+FH  ++  R  P   +   +    +L +M  RL+L  AV  ++ +GL+++G+ +P
Sbjct: 547 DLASLFHAWYNDNRILPVSIIADEKPTQEELDLMQARLRLSKAVRQVLANGLSLLGLSAP 606

Query: 583 NEM 585
             M
Sbjct: 607 TNM 609


>gi|33598837|ref|NP_886480.1| arginyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|39932125|sp|Q7W2Q2|SYR_BORPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33574967|emb|CAE39631.1| arginyl-tRNA synthetase [Bordetella parapertussis]
          Length = 561

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 302/578 (52%), Gaps = 66/578 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P     +    IAG 
Sbjct: 27  QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  L+P+  + ++ ++      YGR     G KV +EFVSANPTGP+HVGH R A +
Sbjct: 87  GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R  + +  +  D P   Y G Y+
Sbjct: 146 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPTDGYKGDYI 204

Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             + ++ A + S +      +    +   L  ++ ++V  + +    DL+A  +  D + 
Sbjct: 205 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 264

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318
            E   +      +++ +D L  +G+ YE                +   L  R+T +  GD
Sbjct: 265 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 306

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR + KS+G YTYF  D+AY K K+ERGF + + + GSDH G V R   V A +   +
Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVAR---VRAGLQGLE 363

Query: 379 AQI-----NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           A I       +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+   
Sbjct: 364 AGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADT 423

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              FD      +S ENPV+Y+QYA+AR  ++   +     ++             ++ DT
Sbjct: 424 EFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADT 470

Query: 494 ------SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                 SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  ++  R       
Sbjct: 471 ALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER------- 523

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  +   L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 524 VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561


>gi|307297805|ref|ZP_07577611.1| arginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917065|gb|EFN47447.1| arginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 543

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 200/585 (34%), Positives = 304/585 (51%), Gaps = 49/585 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F  +L+N +K++  +  +    +D   +E P +   G LSTNAA ILSR L   P  IA 
Sbjct: 2   FKEKLENSIKKVLEEFDIYDDKID-FKVEIPPE-GFGDLSTNAAFILSRILKKSPREIAN 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNI 125
           +I  R+  + D   V +AG GFIN+  S +YL  +L+ ++ +   + R    KG T++  
Sbjct: 60  IICDRLGNEADYSRVEVAGPGFINVDFSITYLSSVLAELIDAPDFWKR----KGDTRIQF 115

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF SANPTGP  VGH R AV GD L  + +  GY V RE YINDAG QI  L  S++ RY
Sbjct: 116 EFASANPTGPFTVGHGRQAVFGDVLCRVFSCRGYGVHREMYINDAGRQIGLLGRSLWVRY 175

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            Q L   + +LPE  Y G YL  + + LA +           +     K Y++  M++ I
Sbjct: 176 NQYL-GVEEELPEDGYQGEYLIDIARGLAGEIGERFKAVWNSEAEAFFKKYALDKMLEDI 234

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              LK L ++ D    E      D   +  +I  L R+  +YE                +
Sbjct: 235 MGTLKRLRVEFDNVFFESSLI--DDGTVDSVIGMLERKELIYES---------------E 277

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             + L  S  V DD D+ L++S+GSYTYF  D+AY   K++RGF  +  + G+DH G++ 
Sbjct: 278 GARWLKVSNFVEDD-DKVLVRSNGSYTYFMTDIAYHYNKHDRGFKKVFDIWGADHMGHIP 336

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-F 424
           R+ A   A+  +   +NV++ + V L R+G  +KMS R G+F TL  +V+ VG DS R F
Sbjct: 337 RMNAAMKALGIEDGFLNVIVHQYVNLKREGEVVKMSTRRGEFTTLDELVEAVGVDSTRYF 396

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             ++  ++ +L FD    +++S +NPVFYVQYA AR  ++FR AK+           +NV
Sbjct: 397 FAMFDPDTHML-FDIDLARQRSNDNPVFYVQYANARISNVFRTAKE-----------KNV 444

Query: 485 IPQESE---FDTSELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                     D+ E + I+ L   +P ++++        +L  YL DL+  FHG+++   
Sbjct: 445 KRSRDSLELLDSQEDRRIIKLLTIFPEILDSVVADYRTNRLTSYLEDLSRAFHGYYNKN- 503

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V   N  L+  RL L  A+ +I+ SGL ++GVE+P+ M
Sbjct: 504 -----IIVDPENPALSGARLALCEAIQNILRSGLELLGVEAPDSM 543


>gi|33603912|ref|NP_891472.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932133|sp|Q7WDQ0|SYR_BORBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33568888|emb|CAE35302.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 561

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 302/578 (52%), Gaps = 66/578 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P     +    IAG 
Sbjct: 27  QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  L+P+  + ++ ++      YGR     G KV +EFVSANPTGP+HVGH R A +
Sbjct: 87  GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R  + +  +  D P   Y G Y+
Sbjct: 146 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPADGYKGDYI 204

Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             + ++ A + S +      +    +   L  ++ ++V  + +    DL+A  +  D + 
Sbjct: 205 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 264

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318
            E   +      +++ +D L  +G+ YE                +   L  R+T +  GD
Sbjct: 265 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 306

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR + KS+G YTYF  D+AY K K+ERGF + + + GSDH G V R   V A +   +
Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVAR---VRAGLQGLE 363

Query: 379 AQI-----NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           A I       +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+   
Sbjct: 364 AGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADT 423

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              FD      +S ENPV+Y+QYA+AR  ++   +     ++             ++ DT
Sbjct: 424 EFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADT 470

Query: 494 ------SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                 SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  ++  R       
Sbjct: 471 ALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER------- 523

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  +   L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 524 VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561


>gi|326315293|ref|YP_004232965.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372129|gb|ADX44398.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 604

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 194/614 (31%), Positives = 304/614 (49%), Gaps = 78/614 (12%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78
           K+      R   E P+  AHG  +  AAM L++PL L+P  + E + A ++  P     V
Sbjct: 18  KLSPGAAGRAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQLKAALEATPAFARWV 77

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           D++ IAG GF+N+ L  +  ++I+  ++ +G  +G      G +V +EFVSANPTGP+HV
Sbjct: 78  DAIEIAGPGFLNIRLKAAAKQEIVREVLAAGDRFGYQK-DNGQRVLVEFVSANPTGPLHV 136

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNND 193
           GH R A +GD + +L A  G+ V REYY NDAG QI TLA S   R +        +  D
Sbjct: 137 GHGRQAALGDAICNLFATQGWSVHREYYYNDAGVQIETLAKSTQLRAKGFKPGDECWPTD 196

Query: 194 SDLP--EGYYPGVYLKHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKII 245
            + P  + +Y G Y++ +  +   K + +        N   E +  I + ++V  +    
Sbjct: 197 PENPASKAFYNGEYIQDIANDFLAKKTVQAEDRAFTANGDVEDYDNI-RQFAVAYLRNEQ 255

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             DL+A N+  D +  E   +      +   +  L  +G+ YE                 
Sbjct: 256 DKDLRAFNLHFDQYYLESSLYTS--GRVEATVKRLVEKGHTYE----------------Q 297

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L  RST  GDD DR + K DG+YTYF  D+AY   K+ERGF  ++ + G+DH G + 
Sbjct: 298 DGALWLRSTDYGDDKDRVMRKKDGTYTYFVPDVAYHISKWERGFAKVVNIQGTDHHGTIA 357

Query: 366 RLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           R+ A   AA V   +   + +L  +VR+ + G  +K+SKRAG ++TLR +++    D+VR
Sbjct: 358 RVRAGLQAADVGIPQGYPDYVLHTMVRVVKGGEEVKISKRAGSYVTLRDLIEWTSKDAVR 417

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR----QAKDIFPDLDFDL 479
           F +L RK      FD      Q+ +NPV+YVQYA+AR +S+ R     A+   PD+    
Sbjct: 418 FFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAAVAHARGDRPDVSGGQ 477

Query: 480 FPRNVIPQ------ESEFDTS-----EL-----------------QLIVHLAEYPRVIEN 511
             +   P       E   DTS     EL                  L++ LA+YP ++  
Sbjct: 478 LEKLSAPDALNDVGEHVTDTSLSSACELLDLGNADLSPLEGQQAQALMLQLAKYPEMLAA 537

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   + P+ + FYL DLA+ +H ++   R       +  ++  +   RL LV A A +++
Sbjct: 538 AAEGEAPHDVTFYLRDLAASYHSYYDAER-------ILVDDEAVKRARLALVAATAQVLH 590

Query: 572 SGLNIIGVESPNEM 585
           +GL ++GV +P  M
Sbjct: 591 NGLAVLGVSAPARM 604


>gi|221070006|ref|ZP_03546111.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220715029|gb|EED70397.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 571

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 181/576 (31%), Positives = 298/576 (51%), Gaps = 59/576 (10%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89
            E P+  AHG  +  AAM L++PL  +P  + E +   ++        VD++ IAG GF+
Sbjct: 31  FENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGPGFL 90

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L P+  ++++  ++    ++G     +G  + +EFVSANPTGP+HVGH R A +GD 
Sbjct: 91  NIRLKPAAKQEVVREVLAQAEKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAIGDA 149

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EGYYP 202
           +++L +  G++V RE+Y NDAG QI+TL  S   R +        +  DSD P  + +Y 
Sbjct: 150 ISNLYSSQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSDNPLAKNFYN 209

Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           G Y+  + K   +K +      E     + +    ++ ++V  +      DL+A N++ D
Sbjct: 210 GDYIADIAKAFLNKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNLKFD 269

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      +   ++ L   G  YE                    L  RST  G
Sbjct: 270 EYYLESSLYEN--GHVEATVNRLIANGKTYE----------------QDGALWLRSTDYG 311

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375
           DD DR + K+DG YTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   AA V 
Sbjct: 312 DDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAADVG 371

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D+VRF +L RK     
Sbjct: 372 IPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEY 431

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD      Q+ +NPV+YVQYA+AR +S+ R  ++              +P   + D S 
Sbjct: 432 TFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEA---------GGAGVPALKDVDLSA 482

Query: 496 LQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           L+      L++ LA+YP ++  A     P+ + FYL DLAS +H ++   R       + 
Sbjct: 483 LEGPQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------IL 535

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++ K+ + RL LV A A ++++GL ++GV +P  M
Sbjct: 536 VDDEKVKLARLALVAATAQVLHNGLAVLGVSAPERM 571


>gi|113866190|ref|YP_724679.1| arginyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134540|sp|Q0KFB0|SYR_RALEH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113524966|emb|CAJ91311.1| Arginyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 595

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 203/603 (33%), Positives = 297/603 (49%), Gaps = 80/603 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIA 84
           L  +  ERP+  AHG L+ N AM ++R L  +P  +A+ IV  ++ D      V ++ IA
Sbjct: 27  LPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRIVDAVQADTRAQGLVQAMEIA 86

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFINL L+P+    +L +++  G  YG    G   +V +EFVSANPTGP+HVGH R A
Sbjct: 87  GPGFINLRLTPAAKADVLRAVLAEGDHYGARERGVHGQVLVEFVSANPTGPLHVGHGRQA 146

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV  R  + L   D+  PE  Y G 
Sbjct: 147 ALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR-ARGLKPGDASWPEAAYNGD 205

Query: 205 YLKHVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDI 258
           Y+  +  + LA K  S     P      +     ++ ++V  +      DL+A  ++ D 
Sbjct: 206 YIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAVTYLRNEQDIDLQAFGVKFDR 265

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      +   + +L  +G  YE                    L  R+T  GD
Sbjct: 266 YYLESSLY--SDGRVEAAVQSLVGKGKTYE----------------SEGALWLRTTDDGD 307

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR + KSDG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A    +    
Sbjct: 308 DKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDMGI 367

Query: 379 AQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV------------- 417
            Q   + +L ++V + ++G  +K+SKRAG ++T+R ++      DE              
Sbjct: 368 PQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLDTGVADWP 427

Query: 418 -----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF------- 465
                G D+VRF +L RK      FD     +Q+ ENPV+YVQYA+AR  SIF       
Sbjct: 428 QHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFESWGGAD 487

Query: 466 ---RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
              R A+    DL     P        E       L   LAE+P ++  A     P+ +A
Sbjct: 488 WEARLAELAGADLSAVTGP--------EASAQAQALGRRLAEFPDMLSGAAAELAPHAVA 539

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           FYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P
Sbjct: 540 FYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAP 592

Query: 583 NEM 585
             M
Sbjct: 593 RRM 595


>gi|319764740|ref|YP_004128677.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330826956|ref|YP_004390259.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317119301|gb|ADV01790.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329312328|gb|AEB86743.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 567

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 190/577 (32%), Positives = 297/577 (51%), Gaps = 57/577 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           R   E P+  AHG L+  AAM L++PL  +P  + E + A ++  P     VD + IAG 
Sbjct: 26  RAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLKAALEATPAFAQWVDVIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L  +  ++++  ++  G  +G     +G KV +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKNAAKQQVVREVLAQGTRFGMQ-PARGEKVLVEFVSANPTGPLHVGHGRQAAI 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199
           GD +++L A  G++V RE+Y NDAG QI+TL  S   R +        +  D+D P  + 
Sbjct: 145 GDAISNLYATQGWQVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTDADNPLAKN 204

Query: 200 YYPGVYLKHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
           +Y G Y++ +      K + +        N   E +  I + ++V  +      DL+A N
Sbjct: 205 FYNGDYIQDIANAFLAKATVKADDRAFTANGDVEDYDNI-RQFAVAYLRNEQDKDLQAFN 263

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++ D +  E   +      +   +  L   G  YE                    L  RS
Sbjct: 264 LRFDEYYLESSLYAN--GHVDATVARLIANGKTYE----------------QDGALWLRS 305

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VA 371
           T  GDD DR + K DGSYTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   A
Sbjct: 306 TDYGDDKDRVMRKQDGSYTYFVPDVAYHIQKWQRGFRKVVNIQGTDHHGTIARVRAGLQA 365

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
           A V   +   + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK 
Sbjct: 366 ADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKP 425

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQE 488
                FD      Q+ +NPV+YVQYA+AR  S+ R  +   D+    D DL P    PQ 
Sbjct: 426 DTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDCDVGALTDVDLSPLEG-PQA 484

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                    L++ LA+YP ++  A     P+ + FYL DLA+ +H ++   R       +
Sbjct: 485 QA-------LMLLLAKYPEMLAAAAAGNAPHDVTFYLRDLAAAYHSYYDAER-------I 530

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  + + RL LV A A ++++GL ++GV +P  M
Sbjct: 531 LVDDEPVRLARLALVAATAQVLHNGLAVLGVSAPARM 567


>gi|261368273|ref|ZP_05981156.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569790|gb|EFB75325.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 585

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 202/571 (35%), Positives = 296/571 (51%), Gaps = 37/571 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKG 87
           L   ++E P D  +G +++N AM  +R     P  IAE I A++ ++  +   V IAG G
Sbjct: 38  LPDFIVEIPADVKNGDVASNLAMAGARVFHKAPRQIAEAITAKLDLNGTLFAGVDIAGPG 97

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL+L   +   +L +   +  EYGR   G G + N+EFVSANPTGPMH+G+ R   +G
Sbjct: 98  FINLFLGQDWFTSVLRA-ACANPEYGRTDAGAGKRYNVEFVSANPTGPMHMGNARGGALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD--LPEGYYPGVY 205
           D LA+ + ++GY+VTRE+YINDAG QI     S+  RY Q LY  +    LP   Y G  
Sbjct: 157 DCLAACLDWAGYDVTREFYINDAGNQIEKFGKSLAIRYLQ-LYKGEEACPLPAECYQGAD 215

Query: 206 LKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           +    KE A+ +    +N   EE    IV D   + +  + RD L    IQ+D++  E D
Sbjct: 216 IIQRAKEFAEVHGDAYVNADFEELKKAIVADALPKNIAGLQRD-LGKYRIQYDVWFHESD 274

Query: 265 FHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-- 319
            H+     ++ ++D L   G  Y   +G +    ++   K  +  K    R T  G +  
Sbjct: 275 LHK--SGAVQAVVDKLLETGACYKAEDGAIMYRSAQYAAKYGVANK----RKTEDGSEEE 328

Query: 320 -VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
             D  L++++G  TYFAAD+AY   K   RGFD  I V G+DH G+V R++    A+   
Sbjct: 329 AKDEVLVRANGIPTYFAADIAYHYNKLAVRGFDKAIDVWGADHHGHVARMKGAMDAIGLH 388

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
             Q++V+L ++V L RDG P++MSKR G  ITL  ++DEV  DS RF    R++S  LDF
Sbjct: 389 GEQLDVVLMQMVNLMRDGKPVRMSKRTGKAITLTDLLDEVPIDSARFFFNQRESSSTLDF 448

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTS 494
           D         ENPV+YVQYA+AR  S+ ++ ++    F  +D        I      D S
Sbjct: 449 DLDLAVRNDSENPVYYVQYAHARICSLLKKLEEQGVAFQGVD-------SIDASVLTDPS 501

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  LI  LA +P  I  A    +P ++  Y  D+A+ FH  ++  R       VQ N   
Sbjct: 502 EQALIRLLAAFPAEIVAAADKYDPARITRYCIDVATAFHRFYNACRILDAEGAVQQN--- 558

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R+ L  AV  +I++ L +  V +P  M
Sbjct: 559 ----RIALSLAVRGVIHNILTMFKVNAPESM 585


>gi|119026436|ref|YP_910281.1| arginyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|166232759|sp|A1A3B6|SYR_BIFAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118766020|dbj|BAF40199.1| arginyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 596

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 185/595 (31%), Positives = 314/595 (52%), Gaps = 74/595 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P  +AEL  A +     + SV +AG GFIN
Sbjct: 36  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAELFAAELTNADGIKSVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++ +++ +G +YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 96  ITLDSASAAAVVDTVLEAGSDYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 209

Query: 211 KELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           K + D+ ++   ++L+ P      ++   P+ +  S Q           M   I+  +K 
Sbjct: 210 KRVIDEANADGVDVLSLPRVDGGADQDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKN 269

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +      +   I +L  +G ++E      K   T           F
Sbjct: 270 FRVNFDVWFHENSLYS--DGEVDQAIADLRARGDIFE------KDGAT----------WF 311

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+ 
Sbjct: 312 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRETNPADVAIYMLGADHHGYIGRMM 371

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+  A  +K  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + D +G D+ R+ + 
Sbjct: 372 AMCEAFGDKPGENMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 431

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A      +   D  L     
Sbjct: 432 RTDYNSPVDIDLNLLSSHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 489

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540
                   T++ +++  LA++P ++  A   + P+++A YL DLA+ +H  ++  R    
Sbjct: 490 --------TADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYHKWYNVERVVPM 541

Query: 541 --ENPRLRFVQANNRKL--------TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P  R  QA+  ++           RL+L  AV ++I  GL+++GV +P++M
Sbjct: 542 ELTDPEARGEQADAIRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVTAPDKM 596


>gi|212715297|ref|ZP_03323425.1| hypothetical protein BIFCAT_00189 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661754|gb|EEB22329.1| hypothetical protein BIFCAT_00189 [Bifidobacterium catenulatum DSM
           16992]
          Length = 616

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 307/596 (51%), Gaps = 76/596 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P   AEL  A +     + SV +AG GFIN
Sbjct: 56  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDFAELFAAELANADGIKSVEVAGPGFIN 115

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++ +++  G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 116 IVLDSASAAAVVDTVLGEGTNYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 175

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 176 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 229

Query: 211 KELADKYSSE---LLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           + + D+ +++   +L+ P      +    P+ +  S Q           M + IR  +K 
Sbjct: 230 RRVIDEANADGVAILDLPRVDGGVDNDGNPLGEGDSEQREEFRKRAVPMMFEEIRKSMKD 289

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +      +   I +L  +G +YE      K   T           F
Sbjct: 290 FRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIYE------KDGAT----------WF 331

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R+ 
Sbjct: 332 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLGADHHGYIGRMM 391

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA  ++  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + D +G D+ R+ + 
Sbjct: 392 AMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 451

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A      +   D  L     
Sbjct: 452 RTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 509

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536
                    ++ +++  LA++P ++  A   + P+++A YL DLA+ +H  W        
Sbjct: 510 --------AADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 560

Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + G +   LR  +A        RL+L  AV ++I  GL+++GV +P+ M
Sbjct: 561 MELTEPEARGEQAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVAAPDRM 616


>gi|120609117|ref|YP_968795.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166232752|sp|A1TJ83|SYR_ACIAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120587581|gb|ABM31021.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 569

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 182/579 (31%), Positives = 298/579 (51%), Gaps = 59/579 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           R   E P+  AHG  +  AAM L++PL L+P  + E + A ++  P     VD++ IAG 
Sbjct: 26  RAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQLKAALEATPAFARWVDAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L  +  ++I+  ++ +G  +G      G +V +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKAAAKQEIVREVLSAGDRFGYQK-DNGQRVLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199
           GD + +L +  G+ V RE+Y NDAG QI+TL  S   R +        +  D + P  + 
Sbjct: 145 GDAICNLFSTQGWSVHREFYYNDAGVQIDTLTKSTQLRARGFKPGDECWPTDPENPASKT 204

Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y++ +  +   K +      E     + +    ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIQDIANDFLAKKTVKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E   +      +   ++ L  +G+ YE                    L  +ST
Sbjct: 265 HFDQYYLESSLYTS--GRVEATVNRLVEKGHTYE----------------QDGALWLKST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372
             GDD DR + K DG+YTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   AA
Sbjct: 307 DYGDDKDRVMRKKDGTYTYFVPDVAYHIAKWERGFAKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V   +   + +L  +VR+ + G  +K+ KRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPQGYPDYVLHTMVRVVKGGKEVKIGKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-----AKDIFPDLDFDLFPRNVIPQ 487
               FD      Q+ +NPV+YVQYA+AR +S+ R        D+    D DL        
Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWAEAGGGDVASLKDVDL-------- 478

Query: 488 ESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            S  +  + Q L++ LA+YP ++  A   + P+ + FYL DLA+ +H ++   R      
Sbjct: 479 -SALEGPQAQALMLQLAKYPEMLTAAAEGEAPHDVTFYLRDLAASYHSYYDAER------ 531

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  ++  +   RL LV A A ++++GL ++GV++P  M
Sbjct: 532 -ILVDDEAVKRARLALVAATAQVLHNGLKVLGVDAPARM 569


>gi|187922480|ref|YP_001894122.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689569|sp|B2SWV4|SYR_BURPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187713674|gb|ACD14898.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 596

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 191/587 (32%), Positives = 300/587 (51%), Gaps = 60/587 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  +   P     V++  +AG G
Sbjct: 37  ITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPQAKGLVEAAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + +++++      +GR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLAAAAKQAVIAAVFAEKEAFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++++A  GY+V RE+Y NDAG QI TLALS   R  + L   D+  P   Y G Y+ 
Sbjct: 157 DALSNVLASQGYDVHREFYYNDAGVQIQTLALSTQAR-ARGLAPGDAGWPASAYNGEYIA 215

Query: 208 HVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + ++      +A      +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 EIARDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   ++     +   ++ L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLYK--EGRVEKTVEALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + K+DG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A      V   K 
Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGVGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------EVG 418
             + +L ++V + R+G  +K+SKRAG ++T+R +++                       G
Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  + K  +   +  
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYSTDEST 497

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V P  SE     + L+  LAE+P ++++A     P+ +AFYL DLA  FH  +  
Sbjct: 498 LADVDVSPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N R   V  ++      R+ L+ A   ++ +GL  IGV +P +M
Sbjct: 553 ---NDRTERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596


>gi|312797448|ref|YP_004030370.1| Arginyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169223|emb|CBW76226.1| Arginyl-tRNA synthetase (EC 6.1.1.19) [Burkholderia rhizoxinica HKI
           454]
          Length = 617

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 301/593 (50%), Gaps = 66/593 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I ++RP+  AHG +++N AM L++PL  +P  +A+ +       P     + S  +AG G
Sbjct: 52  IALDRPKIAAHGDVASNLAMQLAKPLRANPRVLAQQLAEATLAHPRAAGLIASAEVAGPG 111

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           F+NL L+ +  ++ + +I+     +G       G G +V IEFVSANPTGP+HVGH R A
Sbjct: 112 FLNLRLTDAAKQQTVHAILAQRERFGFAPPGRGGHGKQVLIEFVSANPTGPLHVGHGRQA 171

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            +GD L +LM   G+ V RE+Y NDAG QINTLALSV  R  +     D+  PE  Y G 
Sbjct: 172 ALGDALGALMQTQGWAVHREFYYNDAGVQINTLALSVQAR-ARGFKPGDAQWPEAAYNGD 230

Query: 205 YLKHVGKE-LADKYSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           Y+  + ++ LA +  S     P     +   L  ++ ++V  + +    DLKA  ++ D 
Sbjct: 231 YIADIARDYLAGETVSASDGVPVTGAGDVDNLDAIRRFAVTYLRREQDIDLKAFGVKFDQ 290

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +  D   +   +  L   G  YE                D   L  R+T  GD
Sbjct: 291 YYLESSLY--DEGRVERAVQALVAAGKTYE----------------DDGALWLRTTDYGD 332

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376
           D DR + K DG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A   A  +  
Sbjct: 333 DKDRVMRKQDGTYTYFVPDIAYHVTKWERGFTKVINVQGSDHHGTIARVRAGLQALDIGI 392

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--------DEV----------- 417
                + +L ++V + RDG  IK+SKRAG ++T+R ++        DE            
Sbjct: 393 PSGYPDYVLHKMVTVMRDGREIKISKRAGSYVTVRDLIVWSGGGNSDESAASLSPQQLDS 452

Query: 418 -----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
                G D+VRF ++ RK      FD     +Q+ ENPV+YVQYA+AR  S+  + +  +
Sbjct: 453 DMLRKGRDAVRFFLISRKADTEFTFDIDLALKQNDENPVYYVQYAHARICSVLSELRARY 512

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            D   D    ++ P  +E   + LQ    LAEYP+++E+A     P+ +AFYL DLA  F
Sbjct: 513 TDGLEDWSQVDLTPLATERSKALLQ---KLAEYPQMLEHAANELAPHAVAFYLRDLAGEF 569

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  +     N R   V  ++ +  + R  L+ A   ++ +GL  IGV +P +M
Sbjct: 570 HSFY-----NDRAERVLVDDARERLARAALLAATRQVLANGLATIGVSAPEKM 617


>gi|225352613|ref|ZP_03743636.1| hypothetical protein BIFPSEUDO_04239 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156807|gb|EEG70201.1| hypothetical protein BIFPSEUDO_04239 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 616

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 306/596 (51%), Gaps = 76/596 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P   AEL  A +     + SV +AG GFIN
Sbjct: 56  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPHDFAELFAAELANADGIKSVEVAGPGFIN 115

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++ +++  G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 116 IVLDSASAAAVVDTVLNEGANYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 175

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 176 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 229

Query: 211 KELADKYSSE---LLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           + + D+ +++   +L+ P      +    P+ +  S Q           M   IR  +K 
Sbjct: 230 RRVIDEANADGIAILDLPRVDGGVDNDGNPLGEGDSEQREEFRKRAVPMMFDEIRKSMKD 289

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +      +   I +L  +G +YE      K   T           F
Sbjct: 290 FRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIYE------KDGAT----------WF 331

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R+ 
Sbjct: 332 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLGADHHGYIGRMM 391

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA  ++  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + D +G D+ R+ + 
Sbjct: 392 AMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 451

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A      +   D  L     
Sbjct: 452 RTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 509

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536
                    ++ +++  LA++P ++  A   + P+++A YL DLA+ +H  W        
Sbjct: 510 --------AADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 560

Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + G +   LR  +A        RL+L  AV ++I  GL+++GV +P+ M
Sbjct: 561 MELTDPEARGEQAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVAAPDRM 616


>gi|284045965|ref|YP_003396305.1| arginyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950186|gb|ADB52930.1| arginyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 548

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 187/558 (33%), Positives = 276/558 (49%), Gaps = 45/558 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFIN 90
            +ERPR    G  STNAAM+L+  +G  P  IAE + A +  ++   ++   +AG GF+N
Sbjct: 31  TVERPRREGFGDYSTNAAMLLAPRVGKPPREIAEQLGAALQERLGGALERYEVAGPGFLN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L+L+  +    L  ++ +G  +G        +V +EFVSANPTGP+     R A  GD L
Sbjct: 91  LFLADDWYAGALQHVLGAGTRFGAGGATAPERVLVEFVSANPTGPVVAASGRHAAYGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++ F G+EV REYY+NDAG+QI  L  SV  R +        D+PEG Y G Y+  + 
Sbjct: 151 ARILEFHGHEVAREYYLNDAGSQIRKLGESVKARAR------GEDVPEGGYEGDYVVELA 204

Query: 211 KEL---ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
           +E+   AD   +EL               +V  M   I+  L+   + +D F +E   + 
Sbjct: 205 REIPGAADGDPAELARV------------AVGLMYGRIKATLERYGVTYDRFFNESSLYE 252

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           GDPSP++     L + G+ Y             + D     L  R+T  GDD DR L +S
Sbjct: 253 GDPSPVKQAEAELEKLGHTY-------------RHD---DALWLRTTTFGDDKDRVLERS 296

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +G  TYFA+D+AY + K ERGFD  + V G+DH GYV RL+A   A+     ++ +L+  
Sbjct: 297 NGEPTYFASDVAYLESKRERGFDRQLNVFGADHHGYVGRLKAAFEALGGDPEKLEILIMR 356

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV     G   KMSKR G F TL  ++DE+G D+ R+ ML R +   LD D    ++QS 
Sbjct: 357 LVHFVEGGEREKMSKRRGVFTTLDELLDELGVDATRYFMLQRSHDTALDLDLDLARKQSN 416

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ENPV+YVQYA+AR  S+  +A                  +    D +E  L+  L  +P 
Sbjct: 417 ENPVYYVQYAHARIASMLARAGADVVGGALASVAGGAGARSQALDPAERVLLKKLLAFPD 476

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A   + P++L  Y  +LA  F   +         R + A    +   R+ L     
Sbjct: 477 EVAEAAEKRAPHRLTAYALELAQDFTAFYRD------CRVLGAEGEGVEAYRIALSVTAQ 530

Query: 568 SIINSGLNIIGVESPNEM 585
             I   L ++GV +P+ M
Sbjct: 531 RTIAQALGLLGVSAPDSM 548


>gi|28572571|ref|NP_789351.1| arginyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81629852|sp|Q83HT0|SYR_TROW8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28410703|emb|CAD67089.1| arginyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 550

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 181/561 (32%), Positives = 291/561 (51%), Gaps = 41/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + + RP    +G  + +  + L+  L    + IA+ I + +     V  V++A  GFINL
Sbjct: 24  VSLTRPPKPEYGDWALSLPLKLASLLKSPAIDIAQSIASALLELDGVQDVYVAKPGFINL 83

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS  +   I+S ++  G  +GRN      K+N+EFVS NPTGP+H+ H R A VGD++A
Sbjct: 84  KLSREHTTGIISEVLEQGSSFGRNTTQSSKKINLEFVSGNPTGPLHLAHTRWAAVGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G +VTREYYIN+ G QI+  + SV   Y +AL      LP+  YPG Y+K + +
Sbjct: 144 RILINCGADVTREYYINNVGNQIHLFSESV---YARAL---SKSLPKDGYPGEYVKDIAR 197

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  ++ + +++   E  + I +  S Q  ++ I+    A  +  D++ SE+  H  D  
Sbjct: 198 RIQCEFPN-IIDLSYEDAIKIFRKRSWQIQIEEIKKSCIAFRVNFDVWFSEESLHEPDRF 256

Query: 272 PIRDIIDNLAR---QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   LAR    GY+++                       R+T  GDD DR +L+SD
Sbjct: 257 GKSQIDKALARCKQNGYLFQ----------------KNGAFFIRTTEFGDDKDRAVLRSD 300

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQINVL 384
            SYTY+AAD AY+  K  RGF +++ ++G+DH GYVKR +A++          +  + VL
Sbjct: 301 TSYTYYAADCAYYLNKINRGFSDLVILVGADHHGYVKRFQAMSNIFHVDSENNRKNVQVL 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L       + SKR G+ I L  ++  VG D +RF          +D D   +K+
Sbjct: 361 LGQMVSLKNK----RQSKREGNVIGLSEIIQSVGVDPLRFWFCRYPIDTPIDLDEQHLKK 416

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +S +NPV+YVQYAYAR RS+ R A ++     F  FP  ++ +      +E  L+  L +
Sbjct: 417 RSNDNPVYYVQYAYARTRSLIRSA-NLLQMEKFGFFPELLVHE------TETALVSLLYD 469

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           Y  V+ +A    +P+++  YL  LA  +H  +   R  PR   +  +  +L   RL+L  
Sbjct: 470 YKTVVIDAARFLQPHRVVRYLESLAGAYHKWYDKCRIIPRKGILDKSEAELVNTRLELNR 529

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++ + L++IGV +P  M
Sbjct: 530 AVGQVLYNALDLIGVSAPERM 550


>gi|28493318|ref|NP_787479.1| arginyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|81437827|sp|Q83GE9|SYR_TROWT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28476359|gb|AAO44448.1| arginyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 552

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 181/561 (32%), Positives = 291/561 (51%), Gaps = 41/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + + RP    +G  + +  + L+  L    + IA+ I + +     V  V++A  GFINL
Sbjct: 26  VSLTRPPKPEYGDWALSLPLKLASLLKSPAIDIAQSIASALLELDGVQDVYVAKPGFINL 85

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS  +   I+S ++  G  +GRN      K+N+EFVS NPTGP+H+ H R A VGD++A
Sbjct: 86  KLSREHTTGIISEVLEQGSSFGRNTTQSSKKINLEFVSGNPTGPLHLAHTRWAAVGDSIA 145

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G +VTREYYIN+ G QI+  + SV   Y +AL      LP+  YPG Y+K + +
Sbjct: 146 RILINCGADVTREYYINNVGNQIHLFSESV---YARAL---SKSLPKDGYPGEYVKDIAR 199

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  ++ + +++   E  + I +  S Q  ++ I+    A  +  D++ SE+  H  D  
Sbjct: 200 RIQCEFPN-IIDLSYEDAIKIFRKRSWQIQIEEIKKSCIAFRVNFDVWFSEESLHEPDRF 258

Query: 272 PIRDIIDNLAR---QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   LAR    GY+++                       R+T  GDD DR +L+SD
Sbjct: 259 GKSQIDKALARCKQNGYLFQ----------------KNGAFFIRTTEFGDDKDRAVLRSD 302

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQINVL 384
            SYTY+AAD AY+  K  RGF +++ ++G+DH GYVKR +A++          +  + VL
Sbjct: 303 TSYTYYAADCAYYLNKINRGFSDLVILVGADHHGYVKRFQAMSNIFHVDSENNRKNVQVL 362

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L       + SKR G+ I L  ++  VG D +RF          +D D   +K+
Sbjct: 363 LGQMVLLKNK----RQSKREGNVIGLSEIIQSVGVDPLRFWFCRYPIDTPIDLDEQHLKK 418

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +S +NPV+YVQYAYAR RS+ R A ++     F  FP  ++ +      +E  L+  L +
Sbjct: 419 RSNDNPVYYVQYAYARTRSLIRSA-NLLQMEKFGFFPELLVHE------TETALVSLLYD 471

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           Y  V+ +A    +P+++  YL  LA  +H  +   R  PR   +  +  +L   RL+L  
Sbjct: 472 YKTVVIDAARFLQPHRVVRYLESLAGAYHKWYDKCRIIPRKGILDKSEAELVNTRLELNR 531

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++ + L++IGV +P  M
Sbjct: 532 AVGQVLYNALDLIGVSAPERM 552


>gi|225620694|ref|YP_002721952.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1]
 gi|254782945|sp|C0R2B0|SYR_BRAHW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225215514|gb|ACN84248.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1]
          Length = 534

 Score =  290 bits (741), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 196/576 (34%), Positives = 296/576 (51%), Gaps = 65/576 (11%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           LK YLK+ D K      I   I I    D   G  +   AM L++ L  +PL IA  I  
Sbjct: 19  LKEYLKDTDVK-----DIESYIEIGYAVDDKFGDYACPVAMRLAKVLKKNPLEIANSITE 73

Query: 71  RIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             KID    D + +A  GFINL LS +Y+ + ++ ++ +  +YG+N +    K+ +E+VS
Sbjct: 74  --KIDKKYFDKIEVAKPGFINLTLSYNYINECINDLI-NNDDYGKNTVEDKKKILVEYVS 130

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+H+GH R A +G  L++++ ++G+EV +E+Y+NDAG QI  L  SV        
Sbjct: 131 ANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESV------KA 184

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                ++PE  Y G Y+K V K+                   + KD  +++  K+    L
Sbjct: 185 VQEGREIPEDGYHGEYIKDVAKQDG-----------------VPKDIILESQKKL----L 223

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +      D + SE     G    +   +D L ++G ++E                +   +
Sbjct: 224 ERFGTHMDNYASELKIREG--GELEKTMDFLDKEGLLFE----------------EDNAV 265

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
            F+ST  GDD DR + KS+G+YTYFA D+ Y K K +RG+  +I ++G+DH GYV R+ A
Sbjct: 266 WFKSTKYGDDKDRVVKKSNGTYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPRITA 325

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              AVS+  A + V+L +LVRLYR    ++MSKR GD I+L  V+DE+G D  R+ +L R
Sbjct: 326 AVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFLLMR 385

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             S  LDFD    K++  +NPV+YVQYAYAR  +IF + ++     D D  P ++    +
Sbjct: 386 SYSSSLDFDLELAKKKDNDNPVYYVQYAYARICNIFFKLEEKNMSYD-DNKPLDISKIAN 444

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           E   S L+L   +  +P  I  A  + E Y L  Y Y++AS  H  +           V 
Sbjct: 445 E---SSLKLAKMILRFPDEIYEAAKSLEVYTLINYTYEIASALHRFYYDN-------IVL 494

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N ++   RL L+ AV  I+    +IIG+     M
Sbjct: 495 EENAEIRQERLTLIKAVKKILGLCFDIIGISKVERM 530


>gi|71066501|ref|YP_265228.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|109895022|sp|Q4FQB4|SYR_PSYA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71039486|gb|AAZ19794.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 609

 Score =  290 bits (741), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 192/604 (31%), Positives = 301/604 (49%), Gaps = 82/604 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I R +D +HG  ++N A+  ++    +P  +AE IV  +  + D+  + IAG GFIN++L
Sbjct: 36  ITRTKDASHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDIRQIEIAGPGFINVFL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +      +L  I      +G +    G KV +EFVSANPT  +HVGH R A  G ++++L
Sbjct: 96  NTEAKFAVLDDIFNLQAGFGLSKQFDGQKVQVEFVSANPTSSLHVGHGRGAAFGMSVSNL 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +   GY+VTREYY+NDAG Q++ LA S + RY +         P   Y G Y+  + + L
Sbjct: 156 LEAIGYDVTREYYVNDAGRQMDILATSTYLRYLET-NGEPVTFPVNGYQGDYVSDIAQTL 214

Query: 214 ----ADKYSSELL----NFPEEKWLPIVKD------------------------------ 235
               AD Y         + PE+    I  D                              
Sbjct: 215 KTQHADTYVHRFAEIAKDVPEDAQFEINADGEKVLLSGDKEAHIDGLIANSKALLGSGYE 274

Query: 236 ----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
                ++ +++  I+DDL    + ++ + SE    R   S I  ++  L  +GY+YE   
Sbjct: 275 LFLNAALSSILADIKDDLNDFGVSYECWFSE----RSIDSEIEPVLQILEDKGYLYE--- 327

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                            + F+ST  GD+ DR + +++G  TYFA+D+AY K K++RGFD 
Sbjct: 328 -------------KDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFDK 374

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++ V G+DH GYV R++A   A+     +++V+L + V L+R    ++MS R+G F+TLR
Sbjct: 375 VVNVWGADHHGYVPRVKAALLALGIDADRLDVVLVQFVALWRGDEKVQMSSRSGKFVTLR 434

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKD 470
            +  EVG+D+ RF  + RK    +DFD    K QSK+N V+Y+QYA+AR CR + +    
Sbjct: 435 ELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYAHARVCRVLEKLEAS 494

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                D          QE    +SE +LI  LA YP  +  +    EP+ L  YL +LA+
Sbjct: 495 GLSVND----AMGAEQQELLVASSEEELIKLLAAYPATLLRSATGYEPHILTNYLKELAA 550

Query: 531 VFHGHWSHGR---------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           +FHG +   R         E P      A+   +   RL+L  AV  +I++GL ++G+ +
Sbjct: 551 LFHGWYDSNRILPVSLTSGETP-----SADEMAMMQARLRLSKAVRLVISNGLGLLGLSA 605

Query: 582 PNEM 585
           P+ M
Sbjct: 606 PSSM 609


>gi|299532760|ref|ZP_07046147.1| arginyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718984|gb|EFI59954.1| arginyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 569

 Score =  290 bits (741), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 297/580 (51%), Gaps = 61/580 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           R   E P+  AHG  +  AAM L++PL  +P  + E +   ++        VD++ IAG 
Sbjct: 26  RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L P+  ++++  ++    ++G     +G  + +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKPAAKQEVVREVLAQAQKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAI 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199
           GD +++L +  G++V RE+Y NDAG QI+TL  S   R +        +  DS+ P  + 
Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204

Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y+  + K    K +      E     + +    ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +  E   +  +   +   ++ L   G  YE                    L  RST
Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372
             GDD DR + K+DG YTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   AA
Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V   +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVI 485
               FD      Q+ +NPV+YVQYA+AR +S+ R  ++          D+D         
Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           PQ          L++ LA+YP ++  A     P+ + FYL DLAS +H ++   R     
Sbjct: 484 PQAQA-------LMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER----- 531

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  ++ K+ + RL LV A A ++++GL ++GV +P  M
Sbjct: 532 --ILVDDEKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569


>gi|264680676|ref|YP_003280586.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262211192|gb|ACY35290.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 569

 Score =  289 bits (740), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 297/580 (51%), Gaps = 61/580 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           R   E P+  AHG  +  AAM L++PL  +P  + E +   ++        VD++ IAG 
Sbjct: 26  RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L P+  ++++  ++    ++G     +G  + +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKPAAKQEVVREVLAQAEKFGYQ-TDRGENILVEFVSANPTGPLHVGHGRQAAI 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199
           GD +++L +  G++V RE+Y NDAG QI+TL  S   R +        +  DS+ P  + 
Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204

Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y+  + K    K +      E     + +    ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +  E   +  +   +   ++ L   G  YE                    L  RST
Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372
             GDD DR + K+DG YTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   AA
Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V   +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVI 485
               FD      Q+ +NPV+YVQYA+AR +S+ R  ++          D+D         
Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           PQ          L++ LA+YP ++  A     P+ + FYL DLAS +H ++   R     
Sbjct: 484 PQAQ-------ALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER----- 531

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  ++ K+ + RL LV A A ++++GL ++GV +P  M
Sbjct: 532 --ILVDDEKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569


>gi|241765029|ref|ZP_04763024.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241365387|gb|EER60186.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 561

 Score =  289 bits (740), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 187/576 (32%), Positives = 292/576 (50%), Gaps = 61/576 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           +   E P+  +HG  +  AAM L++PL L+P  +AE +   +   P     V  + IAG 
Sbjct: 26  KAAFESPKVASHGDFACTAAMQLAKPLKLNPRQVAENLRTALLATPVYQRWVTEIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYG----RNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           GFIN+ L P+  ++I+  ++ +G  +G    RN      +V +EFVSANPTGP+HVGH R
Sbjct: 86  GFINIRLKPAAKQEIVREVLGAGARFGYRPRRN-----ARVLVEFVSANPTGPLHVGHGR 140

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A +GD ++ L    G++V RE+Y NDAG QI TLA S   R  +     D++ PE  Y 
Sbjct: 141 QAALGDAISHLFDTQGWDVYREFYYNDAGVQIATLATSTQMR-ARGFKPGDAEWPEAAYN 199

Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           G Y+  +  +   K +      E     +   L  ++ ++V  +      DLKA +++ D
Sbjct: 200 GDYIADIAADFLAKKTVRSDDREFTASGDVNDLDGMRLFAVAYLRHEQDLDLKAFDVRFD 259

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      +  ++  L   G  YE                    L  +ST  G
Sbjct: 260 NYYLESSLYT--SGKVDAVVQKLRDAGKTYE----------------HDGALWLKSTEYG 301

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375
           DD DR + K DG YTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   AA V 
Sbjct: 302 DDKDRVMRKGDGGYTYFVPDVAYHITKWERGFTKVVNIQGTDHHGTIARVRAGLQAAGVG 361

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             +   + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK     
Sbjct: 362 IPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEY 421

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-----AKDIFPDLDFDLFPRNVIPQESE 490
            FD      Q+ +NPV+YVQYA+AR  S+ R        D+    D DL         S 
Sbjct: 422 TFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWQEQGGGDVAALKDVDL---------SA 472

Query: 491 FDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
            +  + Q L++ LA+YP ++  A   + P+ + FYL DLA+ +H ++   R       + 
Sbjct: 473 LEGPQAQALMLQLAKYPDMLTAAAEGEAPHDVTFYLRDLAASYHSYYDAER-------IL 525

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  + + RL LV A A ++++GL ++GV +P  M
Sbjct: 526 VEDESVKLARLALVAATAQVLHNGLAVLGVSAPARM 561


>gi|184200608|ref|YP_001854815.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|238689220|sp|B2GLW8|SYR_KOCRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|183580838|dbj|BAG29309.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 556

 Score =  289 bits (740), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 186/562 (33%), Positives = 288/562 (51%), Gaps = 51/562 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP++  HG  +T  AM +++ +G  P  +A+++  R+   P V +V IAG GF+N+ L
Sbjct: 36  VERPKNRDHGDWATTVAMQVAKKVGRSPRDVAQILSERLARVPGVKTVDIAGPGFLNITL 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +    +  S+V  G  +G      GT +N+EFVSANPTGP+H+G  R A VGD+LA +
Sbjct: 96  DAAAAGGLAQSVVEQGSAFGTGDALAGTTINLEFVSANPTGPIHLGGTRWAAVGDSLARV 155

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +   G EV REYY ND G QI+  A S+  R +          PE  Y G Y+  V +E+
Sbjct: 156 LQAQGAEVVREYYFNDHGNQIDRFARSLLARAR------GEAAPEDGYGGQYISDVAQEV 209

Query: 214 ADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
              +   L +  P+E    + +   V+ M   I+  L    +  D+F  E+     +   
Sbjct: 210 LALHPDALESEDPQE----VFRAAGVELMFAQIKSSLHEFGVDFDVFFHENSLF--EDGQ 263

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +  +++ L     +Y                        RST  GDD DR ++KSDG+  
Sbjct: 264 VEKLLEQLRSSDSLY----------------FADGAWWLRSTEHGDDKDRVVIKSDGNAA 307

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+AYFK K +RG D  IY++G+DH GYV RL+A AAA+ +    + VL+ ++V L 
Sbjct: 308 YIAGDIAYFKNKRDRGADLCIYMLGADHHGYVARLKAAAAALGDSPDAVEVLIGQMVNLV 367

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RDG  ++MSKRAG  +T+  +V+ VG D+ R+ +        +D D   +  +S ENPVF
Sbjct: 368 RDGEAVRMSKRAGTVVTMEDLVEVVGVDAARYSLTRYSVDSNIDIDLDVLTRRSNENPVF 427

Query: 453 YVQYAYARCRSIFRQAKDI---------FPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           YVQYA+AR  ++ R A+            P  D  L      P+E++       L+  L 
Sbjct: 428 YVQYAHARTCAVARNAEAAGVRRTDDAGAPQFDAALLSH---PREAD-------LLAALG 477

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +YP V+  A   +EP+++A +L  LA  +H  +   R  P+          +   RL L 
Sbjct: 478 QYPSVVAQAADFREPHRVARHLEALAGAYHRWYDACRVTPQ---GDGEVELVHHTRLWLN 534

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++ +GL+++GV +P  M
Sbjct: 535 DAVRQVLANGLDLLGVSAPERM 556


>gi|332524260|ref|ZP_08400484.1| arginyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332107593|gb|EGJ08817.1| arginyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 566

 Score =  289 bits (739), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 193/568 (33%), Positives = 286/568 (50%), Gaps = 52/568 (9%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGF 88
             E P+  AHG L+  AAM L+R L  +P  + + +V  +   P     V ++ IAG GF
Sbjct: 28  AFESPKQAAHGDLAITAAMGLARTLKKNPREVGQQLVELLGRQPAFERWVQALEIAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL L P+  + +++ ++  G  +GR   G G K+ +EFVSANPTGP+HVGH R A +GD
Sbjct: 88  INLRLKPAARQAVVAEVLQGGEAFGRKPAGAG-KLMVEFVSANPTGPLHVGHGRQAALGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++  L    G++VTRE+Y NDAG QI  LA S   R  + L   D   PE  Y G Y+  
Sbjct: 147 SICRLFESQGWDVTREFYYNDAGVQIQNLATSTRCRL-KGLKPGDDGWPESAYNGDYIAD 205

Query: 209 VGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +  + A K +            +   +  ++ ++V  +      DL+A  ++ D +  E 
Sbjct: 206 IAADFAAKKTVHADDRAFTASGDADDVDGIRQFAVAYLRHEQDLDLQAFGVRFDNYYLES 265

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +      + D +  L   G  +E                D   L  RST  GDD DR 
Sbjct: 266 SLYA--DGRVEDTVRRLVAAGKTFE----------------DGGALWLRSTDYGDDKDRV 307

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381
           + KSDGSYTYF  D+AY   K+ERGF  +I V GSDH G + R+ A   AA V       
Sbjct: 308 MRKSDGSYTYFVPDVAYHIAKFERGFTKVINVQGSDHHGTIARVRAGLQAAGVGIPAGYP 367

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           + +L ++V + + G  +K+SKRAG ++TLR ++D    D+VR+ ++ RK      FD   
Sbjct: 368 DYVLHKMVTVMKGGQEVKISKRAGSYVTLRDLIDWTSRDAVRYFLISRKADTEFVFDIDL 427

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
             + + ENPVFYVQYA+AR  S+  Q +        DL  R   P       SE  L++ 
Sbjct: 428 ALKANDENPVFYVQYAHARICSVLAQYQGETDFAGADL-SRLTAP-------SEYALMLQ 479

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMM 558
           LA YP ++E A     P+ +AFYL DLA+ FH +++  R   ++P L   +      T  
Sbjct: 480 LAAYPGMLERAAAEHAPHDVAFYLRDLAAAFHSYYAAERFLVDDPALARARMALLAAT-- 537

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEMS 586
                   A ++ + L ++GV +P  MS
Sbjct: 538 --------AQVLRNALGMLGVSAPTSMS 557


>gi|169334677|ref|ZP_02861870.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257415|gb|EDS71381.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM
           17244]
          Length = 557

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 183/566 (32%), Positives = 296/566 (52%), Gaps = 38/566 (6%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           ++++K+ + +I +E PR+   G  S N AM L++    +P  IAE I+  I      V  
Sbjct: 28  LEIKKEDVPQIRVEVPREEKFGDFSVNTAMQLAKAARCNPRIIAENIIKNIDTKNSYVKD 87

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           + IAG GFIN  L   +L   L  ++    +YG+ +     +VN+E+VSANPTGP+H+G+
Sbjct: 88  ISIAGAGFINFTLDNKWLYDELKKVITLKDKYGKIVEENPKRVNVEYVSANPTGPLHIGN 147

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R   +GD +++++ ++G +VT+E+Y+NDAG QI     S+  RY Q L   D + PE  
Sbjct: 148 ARGGAIGDVISNILTWAGCDVTKEFYLNDAGNQIIKFGESLEARYLQEL-GKDVEFPEDG 206

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +  + K   ++   +LLN  EE+    + +YS+   +  + +DLK   I +D+F 
Sbjct: 207 YKGEDITDLAKSYIEENGDKLLNVSEEERQSELVEYSLDKNVSNMVNDLKDYGIDYDVFF 266

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   H  +   I D+I  +   G VY+                    L F+ T  G + 
Sbjct: 267 SERTLH--NSGAIDDVISKMKNDGSVYK----------------KEGALWFKGTEYGLEK 308

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           D  L++ +G  TY+AAD+AY   K  +R FD  I V G+DH G+V RL+    A+   + 
Sbjct: 309 DEVLIRQNGVPTYYAADIAYHYDKLVKRNFDYAINVWGADHHGHVARLKKAMVALGVNED 368

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           +++V+L +LV L ++   ++MSKR G+  TL  +V EVG D+ RF+  + K +  +DFD 
Sbjct: 369 RLDVILMQLVHLVKNNEALRMSKRKGNIYTLSDLVGEVGKDAARFVFNYNKPNTHMDFDL 428

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
               +QS +NPVFYVQYA+AR  SI R         + +L  +            E+ L+
Sbjct: 429 DLAIKQSSDNPVFYVQYAHARICSIIRNIGKEVKAENLELLNK----------KEEINLL 478

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             ++ +   I  A+   +P K+  Y  DLA  FH  ++  R       V  ++  L   R
Sbjct: 479 KVISNFSDEILKASNDLDPSKITKYAMDLAGSFHSFYNAHR-------VIVDDEDLMNAR 531

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV A  +++ + L+I+GV +  +M
Sbjct: 532 LALVTATRNVLKNTLDILGVSALEKM 557


>gi|171464254|ref|YP_001798367.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692828|sp|B1XSF4|SYR_POLNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171193792|gb|ACB44753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 575

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 197/585 (33%), Positives = 292/585 (49%), Gaps = 76/585 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK----IDPDVDSVFIAGKGFI 89
           +ERP+   HG ++ N A+ LS+   L+P  +A+ +V R++     +  + S  IAG GF 
Sbjct: 34  LERPKAVDHGDVACNIALQLSKAWKLNPRELAQALVERLQQQTGFNELIASCEIAGPGFS 93

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLI--GKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N  LS +    ++  I+  G  +G +    G  T   IEFVSANPTGP+HVGH R A +G
Sbjct: 94  NFRLSNAAKTAVVQEILSGGTSFGESAPADGSATSAMIEFVSANPTGPLHVGHGRQAALG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+A  G +V RE+Y NDAG QI  LALSV  R  Q L   D+  PE  Y G Y+ 
Sbjct: 154 DALANLLATQGIKVHREFYYNDAGVQIANLALSVQARL-QGLKPGDAKWPEQAYNGEYIA 212

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +      K S E   F ++  +  ++ ++V  +      DLK   ++ D +  E   + 
Sbjct: 213 EIATTF--KASPE---FKDD--IEAIRQFAVAYLRNEQDIDLKTFGVKFDCYYLESSLY- 264

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                +  I+ +L   G  YE                    L  ++   GDD DR + KS
Sbjct: 265 -TDGSVAQIVGDLQSIGKTYE----------------SEGVLWLKTIDDGDDKDRVMRKS 307

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK------KAQI 381
           DGS+TYF  D+AY   K+ RGF  +I V GSDH G + R+ +    V++K      K   
Sbjct: 308 DGSFTYFVPDVAYHTSKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKTYP 367

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------EVGSDSVR 423
           + +L ++V + R G  +K+SKRAG ++T+R +V+                  + G D+VR
Sbjct: 368 DYVLHKMVTVMRHGEEVKISKRAGSYVTVRDLVEWSGGVTPEMTSEERELALQRGRDAVR 427

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL---DFDLF 480
           F ++ RK      FD     +Q+ ENPVFYVQYA+AR  SI +Q      DL   D  L 
Sbjct: 428 FFLISRKADTEFVFDIDLALQQNDENPVFYVQYAHARISSILQQWGGQTSDLASADLSLL 487

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                 Q    D     L+  LAEYP ++  A     P+ LAFYL +LA  FH  ++  R
Sbjct: 488 ------QSKASD----HLLRCLAEYPEMLTTAAEELAPHALAFYLRNLAGDFHTFYNADR 537

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V  +++ L + RL L+ A   ++ +GL ++GV +P +M
Sbjct: 538 -------VLVDDQNLKLARLALLSATRQVLQNGLKVLGVSAPAKM 575


>gi|296137179|ref|YP_003644421.1| arginyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295797301|gb|ADG32091.1| arginyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 595

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 197/627 (31%), Positives = 311/627 (49%), Gaps = 92/627 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F++RL   L++    ++ E      I + RPR   HG L++N AM L++PL  +P  +A
Sbjct: 14  EFTARLTTALQQAATALQPE--FSGSIELSRPRSDDHGELASNLAMQLAKPLKRNPRDVA 71

Query: 66  ELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + I+  ++ + D    +    IAG GFIN +L  + L++++  +     ++G +  G+  
Sbjct: 72  QQIIDALRTNADLAEGIARTEIAGPGFINFHLHAAVLQQVIVEVEQGAAKFGHSRAGREQ 131

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +EFVSANPTGP+HVGH R   +GD +A+++   G+ V RE+Y NDAG QI TLALSV
Sbjct: 132 PMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLALSV 191

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD------ 235
             R  +     D+  PE  Y G Y+  + +   D  + E  + P+++  PIV +      
Sbjct: 192 QAR-ARGYKPGDAQWPESAYNGDYIADIAR---DFLACE--SVPDDQGQPIVANGQADDL 245

Query: 236 -----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                ++V  + +    DLK   I+ D +  E   +      + D +  L   G+ YE  
Sbjct: 246 DNIRRFAVAYLRREQDLDLKTFGIRFDNYYLESSLY--TDGRVEDAVQRLQASGHTYE-- 301

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             L  R+T  GDD DR + KSDG+YTYF  D+AY   K++RGF 
Sbjct: 302 --------------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFH 347

Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             + + GSDH G + R+ A   A  +       + +L ++V + R G  +K+SKRAG ++
Sbjct: 348 RAVNIQGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYV 407

Query: 409 TLRHVVD------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           T+R +++                  + G D+VRF ++ RK      FD      QS ENP
Sbjct: 408 TVRDLIEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENP 467

Query: 451 VFYVQYAYARCRSIFRQAKDIFP------------DLDFDLFPRNVIPQESEFDTSELQL 498
           V+YVQYA+AR  S+F Q     P            DL   + PR            E  L
Sbjct: 468 VYYVQYAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPR------------ERAL 515

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           ++ LA YP+V+  A     P+++AFYL DLA+ FH  ++  R       V  +   L   
Sbjct: 516 LLTLARYPQVLAAAAQELAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHA 568

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL+L+ AV  ++++ L ++GV +P  M
Sbjct: 569 RLRLLRAVRQVMHNALAVLGVSAPQRM 595


>gi|160896118|ref|YP_001561700.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687178|sp|A9BRF4|SYR_DELAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|160361702|gb|ABX33315.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 565

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 186/575 (32%), Positives = 301/575 (52%), Gaps = 55/575 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           R   E P+  AHG  +  AAM L++PL L+P ++ E + A ++  P     VD++ IAG 
Sbjct: 26  RAAFESPKVAAHGDFACTAAMQLAKPLKLNPRSLGEQLKAALEATPSFQRWVDAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L P+  ++I+  ++    ++G  L  +G K+ +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKPAAKQQIIREVLEQAEKFGW-LADRGAKMLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199
           GD + +L A  G+ V RE+Y NDAG QI+TL  S   R +        +  D + P  + 
Sbjct: 145 GDAICNLYATQGWGVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPIDPENPASKA 204

Query: 200 YYPGVYLKHVGKE-LADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y++ +  + LA K       E     + +    ++ ++V  +      DL+A N+
Sbjct: 205 FYNGSYIQDIADDFLACKTVKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E   +      + D +  L   G+ YE               +D   L  +ST
Sbjct: 265 HFDEYYLESSLYTN--GYVEDAVQRLIAGGHTYE---------------LD-GALWLKST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372
             GDD DR + K DG+YTYF  D+AY   K++RG+  ++ + G+DH G + R+ A   AA
Sbjct: 307 DYGDDKDRVMRKQDGNYTYFVPDVAYHIQKFKRGYSKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V       + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPAGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
               FD      Q+ +NPV+YVQYA+AR C  +     D     D DL         S  
Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLAAWGGDAATLKDVDL---------SAL 477

Query: 492 DTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
           +  + Q L++ LA+YP ++ +A     P+ + FYL +LAS++H ++   R       +  
Sbjct: 478 EGPQAQALMLQLAKYPAMLTSAAEGNAPHDVTFYLRELASLYHSYYDAER-------ILV 530

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ K+ + RL L+ A   ++++GL ++GV +P  M
Sbjct: 531 DDEKVKLARLALISATRQVLHNGLAVLGVSAPQRM 565


>gi|124265346|ref|YP_001019350.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166232805|sp|A2SC26|SYR_METPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|124258121|gb|ABM93115.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 561

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 194/569 (34%), Positives = 297/569 (52%), Gaps = 51/569 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV----ARIKIDPDVDSVFIAGKGF 88
             E P+  AHG L+  +AM L++PL  +P  +A+ ++     R  +   V ++ IAG GF
Sbjct: 28  AFESPKQAAHGDLAITSAMQLAKPLKRNPRELAQALIDALQRREAVQRWVAALEIAGPGF 87

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL L  +  ++I++ ++ SG ++GR       +  +EFVSANPTGP+HVGH R A +GD
Sbjct: 88  INLRLKDTTKQQIVAEVLASGTDFGRQ-PATSERALVEFVSANPTGPLHVGHGRQAALGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +  L    G++VTRE+Y NDAG QI TLA S   R  Q L   D+  PE  Y G Y+  
Sbjct: 147 AICKLFETQGWQVTREFYYNDAGVQIGTLAASTQARL-QGLKPGDAGWPESAYNGDYIAD 205

Query: 209 VGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +  +   + +      E     +   L  ++ ++V  +      DL+A  ++ D +  E 
Sbjct: 206 IAADFLARKTVKADDREFTASGDPADLDGIRQFAVAYLRHEQDLDLQAFGVRFDHYFLES 265

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +      +   +  L   G  +E                D   L  R+T  GDD DR 
Sbjct: 266 SLYA--TGRVEATVGKLVAAGKTFE----------------DGGALWLRTTDYGDDKDRV 307

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381
           + KSDGSYTYF  D+AY   K+ERG+  +I + GSDH G + R+ A   AA V       
Sbjct: 308 MKKSDGSYTYFVPDVAYHVNKWERGYHKVINIQGSDHHGTIARVRAGLQAADVGIPAGYP 367

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           + +L ++V + R G  +K+SKRAG ++TLR ++D  G D+VRF ++ RK      FD   
Sbjct: 368 DYVLHKMVTVMRGGEEVKISKRAGSYVTLRDLIDWTGKDAVRFFLISRKADTEFVFDVDL 427

Query: 442 VKEQSKENPVFYVQYAYARCRSIF-----RQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
             +++ ENPV+YVQYA+AR  S+      +QA D       DL  R V P E+       
Sbjct: 428 ALKKNDENPVYYVQYAHARICSVIVQWREQQAGDPATLAQADL-ARLVAPTEAA------ 480

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ LA YP ++  A  +  P+ +AFYL DLA  FH +++        RF+  ++  L+
Sbjct: 481 -LMLKLAAYPVMLSGAAESLAPHDVAFYLRDLAGAFHSYYAAE------RFL-TDDPALS 532

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+ A A ++ +GL ++GV +P+ M
Sbjct: 533 RARLALLAATAQVLRNGLAVLGVSAPDRM 561


>gi|311113372|ref|YP_003984594.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944866|gb|ADP41160.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 561

 Score =  287 bits (735), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 179/560 (31%), Positives = 290/560 (51%), Gaps = 49/560 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP+   HG  +TN A+ L++ +G +P  +A ++  +I   P V +V IAG GF+N+ L
Sbjct: 43  VERPKSREHGDWATNIALQLAKKVGKNPREVAAVLADKIASIPGVSTVDIAGPGFLNITL 102

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +    + ++IV +G  YG +    G  +N+EFVSANPTGP+H+G  R A VGD LA++
Sbjct: 103 DAAAAGTLAATIVEAGNTYGTSDKFAGKTINLEFVSANPTGPIHLGGTRWAAVGDALANI 162

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +   G  V REYY ND G QI+    S+    +          PE  Y G Y+  +  ++
Sbjct: 163 LEAEGANVVREYYFNDHGTQIDRFVNSLLAAAK------GEPTPEDGYAGAYITDIKDQI 216

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSP 272
             +    L     E    + ++   + M   I++ L       D+F  E+  F  G+   
Sbjct: 217 LAQRPDAL---DAENPAEVFREIGTELMFAQIKESLHRFGTDFDVFFHENSVFESGEAD- 272

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              II+ + + G ++E                       R+T  GDD DR ++KSDG++ 
Sbjct: 273 --RIIEQMKQDGQLFE----------------SEGAWWMRTTDYGDDKDRVVIKSDGNHA 314

Query: 333 YFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           Y A D+AYF+ K  R     D  IY++G+DHSGYV RL+A+A  +  +  QI V++ +LV
Sbjct: 315 YVAGDIAYFRNKMTRPENPADIAIYMLGADHSGYVGRLKAIAQILGYRTEQIEVMIGQLV 374

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L +DG  ++MSKRAG+ +TL  +V+ VG D+ R+ ++       +D D   + ++S +N
Sbjct: 375 NLVKDGKHVRMSKRAGNVVTLEDLVEAVGVDAARYELIRYSVDSTIDIDLDLLVQKSSDN 434

Query: 450 PVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           PV+YVQYA+AR  ++ R A D    +   +D  L      P ++E       L+  L +Y
Sbjct: 435 PVYYVQYAHARTAAVERNAIDAGVHLADGVDTGLLN---TPADTE-------LLAVLGQY 484

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  +  A    EP++++ YL +LA+ +H  +   R  P+      +   L   RL L +A
Sbjct: 485 PATVRTAAEFYEPHRMSRYLENLAAAYHSWYGLSRVAPKGDEPVTD---LHRTRLLLNNA 541

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P  M
Sbjct: 542 TRQVLANGLGLLGVTAPERM 561


>gi|215426612|ref|ZP_03424531.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289749845|ref|ZP_06509223.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T92]
 gi|289690432|gb|EFD57861.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T92]
          Length = 460

 Score =  287 bits (735), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 259/495 (52%), Gaps = 53/495 (10%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K+++S++ +G  YG +L+  G KVN+EFVSANPTGP+H+G  R A VGD L  L+   G 
Sbjct: 10  KVVTSVIDAGHSYGHSLLLAGRKVNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGA 69

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V REYY ND GAQI+  A S+    +          P+  Y G Y+ ++ +++  K + 
Sbjct: 70  DVVREYYFNDHGAQIDRFANSLIAAAK------GEPTPQDGYAGSYITNIAEQVLQK-AP 122

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           + L+ P+ +     +   V  M   I+  L       D++  ED  H G    + + I  
Sbjct: 123 DALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIAR 180

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L   G +YE      K   T            R++  GDD DR ++KSDG   Y A DLA
Sbjct: 181 LRETGNIYE------KDGAT----------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLA 224

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V L RDG P++
Sbjct: 225 YYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVR 284

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSKRAG  +TL  +V+ +G D+ R+ ++       +D D       S ENPV+YVQYA+A
Sbjct: 285 MSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHA 344

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIE 510
           R  ++ R A ++            +IP     DT+ L+L+ H         L E+PRV+E
Sbjct: 345 RLSALARNAAEL-----------ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLE 388

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   +EP+++  YL DLA  +H  +   R  P+          L   RL L  A   +I
Sbjct: 389 TAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVI 445

Query: 571 NSGLNIIGVESPNEM 585
            +GL IIGV +P  M
Sbjct: 446 ANGLAIIGVTAPERM 460


>gi|300741294|ref|ZP_07071315.1| arginine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380479|gb|EFJ77041.1| arginine--tRNA ligase [Rothia dentocariosa M567]
          Length = 561

 Score =  287 bits (735), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 179/560 (31%), Positives = 290/560 (51%), Gaps = 49/560 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP+   HG  +TN A+ L++ +G +P  +A ++  +I   P V +V IAG GF+N+ L
Sbjct: 43  VERPKSREHGDWATNIALQLAKKVGKNPREVAAVLADKIASIPGVSTVDIAGPGFLNITL 102

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +    + ++IV +G  YG +    G  +N+EFVSANPTGP+H+G  R A VGD LA++
Sbjct: 103 DAAAAGTLAATIVEAGKTYGTSDKFAGKTINLEFVSANPTGPIHLGGTRWAAVGDALANI 162

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +   G  V REYY ND G QI+    S+    +          PE  Y G Y+  +  ++
Sbjct: 163 LEAEGANVVREYYFNDHGTQIDRFVNSLLAAAK------GEPTPEDGYAGAYITDIKDQI 216

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSP 272
             +    L     E    + ++   + M   I++ L       D+F  E+  F  G+   
Sbjct: 217 LAQRPDAL---DAENSAEVFREIGTELMFAQIKESLHRFGTDFDVFFHENSVFESGEAD- 272

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              II+ + + G ++E                       R+T  GDD DR ++KSDG++ 
Sbjct: 273 --RIIEQMKQDGQLFE----------------SEGAWWMRTTDYGDDKDRVVIKSDGNHA 314

Query: 333 YFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           Y A D+AYF+ K  R     D  IY++G+DHSGYV RL+A+A  +  +  QI V++ +LV
Sbjct: 315 YVAGDIAYFRNKMTRPENPADIAIYMLGADHSGYVGRLKAIAQILGYRTEQIEVMIGQLV 374

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L +DG  ++MSKRAG+ +TL  +V+ VG D+ R+ ++       +D D   + ++S +N
Sbjct: 375 NLVKDGKHVRMSKRAGNVVTLEDLVEAVGVDAARYELIRYSVDSTIDIDLDLLVQKSSDN 434

Query: 450 PVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           PV+YVQYA+AR  ++ R A D    +   +D  L      P ++E       L+  L +Y
Sbjct: 435 PVYYVQYAHARTAAVERNAIDAGVHLADGVDTGLLN---TPADTE-------LLAVLGQY 484

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  +  A    EP++++ YL +LA+ +H  +   R  P+      +   L   RL L +A
Sbjct: 485 PATVRTAAEFYEPHRVSRYLENLAAAYHSWYGLSRVAPKGDEPVTD---LHRTRLLLNNA 541

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL ++GV +P  M
Sbjct: 542 TRQVLANGLGLLGVTAPERM 561


>gi|213964728|ref|ZP_03392928.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952921|gb|EEB64303.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 550

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 182/556 (32%), Positives = 284/556 (51%), Gaps = 41/556 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR+  HG  +TN AM L + +G+ P  +A  I   +     +D   IAG GFIN+ 
Sbjct: 33  TVERPRNPEHGDYATNIAMQLGKRVGMVPRDLATEIATALGASEGIDEAIIAGPGFINIR 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+     KI+  ++ +G ++G         VN+EFVSANPTGP+H+G  R A VGD L  
Sbjct: 93  LASDAQGKIVEEVLAAGEKWGHADFNSNLDVNLEFVSANPTGPIHLGGTRWAAVGDALGR 152

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +++ +G +VTREYY ND G QI+  + S+      A  N  +  PE  Y G Y++ +   
Sbjct: 153 VLSATGAKVTREYYFNDHGRQIDRFSDSLV----AAARNQPT--PEDGYGGEYIQDIAAA 206

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           + +K + + L   EE+     +   V  M + I++ L       D++  E+     +   
Sbjct: 207 VLEK-NPQALEGSEEEVQEHFRAIGVDMMFEHIKESLHEFGTDFDVYFHENSLF--ESGQ 263

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +++L   G +YE                       +ST  GDD DR ++KSDG   
Sbjct: 264 VEAAVNSLKENGKLYEA----------------DGAWWLKSTDYGDDKDRVVIKSDGDAA 307

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+AY K K++RG +  IY++G+DH GY+ RL A AAA+      + VL+ ++V L 
Sbjct: 308 YIAGDIAYVKNKFDRGHNLCIYMLGADHHGYIARLRAAAAALGYNADGVEVLIGQMVNLL 367

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RDG  ++MSKRAG  +TL  +V+ +G D+ R+ ++       LD D      QS +NPV+
Sbjct: 368 RDGKAVRMSKRAGTVVTLDDLVESIGVDAARYSLIRSSVDSSLDIDLGLWASQSSDNPVY 427

Query: 453 YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           YVQY +AR  SI R+A++        DF L            +  E +LI  + E+P +I
Sbjct: 428 YVQYGHARLCSIGRRAEETGVTSEGADFSLL----------VEDHEGELIRTIGEFPAII 477

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++A   +EP+++A Y   LA VFH  +   +  P+         +L   RL L  A    
Sbjct: 478 KSAADLREPHRIARYAEQLAGVFHRFYDTCQILPK---ADEEVSELHRARLGLAEATRQT 534

Query: 570 INSGLNIIGVESPNEM 585
           + + L ++GV +P  M
Sbjct: 535 LANALQLLGVTAPERM 550


>gi|311103352|ref|YP_003976205.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758041|gb|ADP13490.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 560

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 189/567 (33%), Positives = 297/567 (52%), Gaps = 47/567 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           +++ERP+  AHG ++TN AM L++P   +P  +A+ IV  +   P     ++S  IAG G
Sbjct: 28  VLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIVDALMAQPGAAGLIESAEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL ++ +  + +++++   G  +GR+    G K+ +EFVSANPTGP+HVGH R A +G
Sbjct: 88  FINLRITAAARQAVIAAVAEQGAAFGRS-PRSGEKILVEFVSANPTGPLHVGHARQAALG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L  L    G++VTRE+Y NDAG QI+ LA+SV  R  + L     D P   Y G Y+ 
Sbjct: 147 DALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQAR-ARGLTTESPDWPVDGYKGDYIA 205

Query: 208 HVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFISE 262
            + ++     +  S+ ++      +  + D  V A+  + R+   DL+A  +  D +  E
Sbjct: 206 DIARDFQAGATVHSDGVDVIATGDVDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYYLE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDDV 320
              +      +   +  L   G+ YE                +   L  R+T +  GDD 
Sbjct: 266 SSLY--TSGRVEATVKALVAGGHTYE----------------EGGALWLRTTELGTGDDK 307

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--K 378
           DR + KS+G YTYF  D+AY K K+ERGF   + + GSDH G V R+ A   A+ E   K
Sbjct: 308 DRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHGTVARVRAGLQALEEGIPK 367

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
                +L ++V++ R G  +K+SKRAG ++T+R ++D VG D+VR+ ++ R+      FD
Sbjct: 368 DYPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVFD 427

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                 +S ENPV+Y+QYA+AR  S+   A    P  D       ++   +EF      L
Sbjct: 428 VDLALSKSDENPVYYIQYAHARICSVINNAA--MPAADVAQADAALLTAPTEF-----AL 480

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  LAE+P V+  A     P+ +AF+L D AS FH  +   R       V  ++  L + 
Sbjct: 481 MQRLAEFPNVVALAAQELSPHHIAFWLRDCASDFHAWYGAER-------VLIDDTALKLA 533

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL+L      ++ +GL ++GV +P  M
Sbjct: 534 RLRLASTTRQVLANGLELMGVSAPERM 560


>gi|194335027|ref|YP_002016887.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|229470732|sp|B4S6D8|SYR_PROA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194312845|gb|ACF47240.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 551

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 188/561 (33%), Positives = 295/561 (52%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I IE+P +   G  STN A+ L++    +P  +AE I A+++  P+ VD   IAG GFIN
Sbjct: 24  ITIEKPSNKQFGDFSTNIALTLAKECRKNPRQLAEEISAKLEFRPETVDKTTIAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+P+++ + +  ++  G ++G+   GKG K  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FYLTPAFIMQSVEQVLNEGDQFGKTCTGKGQKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+   GY+VTREYY NDAG Q+  LA SV  RY +         P+ +Y G Y+  + 
Sbjct: 144 ANLLESQGYKVTREYYFNDAGRQMTILAESVRLRYLECC-GEAIAFPDTHYQGDYISDIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH---R 267
            +L +K+  EL    E   L   K  +   +   I++ L  LNI HD F +E   +   +
Sbjct: 203 AKLFEKHGVEL---KEVSQLDEFKQIAETYIFASIKNTLHRLNIHHDSFFNEHKLYQTGQ 259

Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              SP   +ID L + GY+  Y+G                   + F +T +G + D+ L+
Sbjct: 260 NGKSPNEQVIDALDKAGYISNYDG------------------AVWFTTTKLGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   KYER F  +I V G+DH   Y   +EA+   +     +I V 
Sbjct: 302 KSTGEPSYRLPDIAYHVTKYERAFSEIINVFGADHIDEYPDVIEAL-RILGYDPGRIKVA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    +G  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDVELAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS++NPVFY+QYA+AR  S+ + A+    ++ F      V   ++     ELQL + L +
Sbjct: 421 QSRDNPVFYLQYAHARICSLVKLAEQ---EIGFTQSDIGVHLMQNLDSPHELQLGLALLD 477

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P VI +A    EP K+  YL+ +A ++H  +   +E P L+        +   RL L  
Sbjct: 478 FPEVISSAVRMLEPQKMVEYLHHVAELYHRFY---QECPILK----AEPDICKARLFLSL 530

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +G  I+GV +P  M
Sbjct: 531 ATRQVLQNGFRILGVTAPTAM 551


>gi|160903090|ref|YP_001568671.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360734|gb|ABX32348.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 549

 Score =  286 bits (733), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 188/558 (33%), Positives = 298/558 (53%), Gaps = 41/558 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA----GKGF 88
            IE P     G  S+N A +L++ L   P  IA+++   +     V S F        GF
Sbjct: 28  TIETPPKDDMGDFSSNVAFLLTKRLRKSPQEIAQILKEEL-----VKSSFFEKVDNANGF 82

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N ++SP   ++I S I+ +   YG+  IGKG  +  EF S NPTGP+ V H R AV+GD
Sbjct: 83  LNFFVSPQIYQRICSKILSNPKTYGKFDIGKGANIQFEFASINPTGPITVAHGRQAVMGD 142

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA++   +GY V RE Y+NDAG QI  L+ S++ RY + L  +  ++PE  Y G YL  
Sbjct: 143 VLANIYEQAGYVVQREMYLNDAGRQIKLLSYSLWVRYNEIL-GSKYEIPEDGYRGEYLVD 201

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
             K++ +KY  +  +  +E+   I +   ++ M+K + + L+ +N+  D+  SE    + 
Sbjct: 202 TAKKVLNKYGEKFKDKWDEETEDIFRKEVLEDMLKNMLETLEKINVNFDVIFSEQLLFKN 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +   +++L  +GYVYE            K D     L F+ + + D+ D+ L++S 
Sbjct: 262 --KMVEKTLNDLKSKGYVYE------------KDD----ALWFKVSDLIDENDKVLIRSK 303

Query: 329 GSY-TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            S  TYF  D+AY   KY RGFD +I +MGSDH G++ R+ A A A+   +  + ++L +
Sbjct: 304 DSMPTYFCDDIAYHYYKYLRGFDTVIDIMGSDHHGHIPRMMASAKALGLPENFLKIILHQ 363

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V + +    IKMS R+G+F TL  ++  VG D+VR+          L+FD     ++S 
Sbjct: 364 FVNVKKGEEIIKMSTRSGEFFTLDDLIQNVGKDAVRYFFAMVDPDTTLNFDIDLAIKKSN 423

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ENPV+YVQYA+AR  SIF++A+     ++++LF    +  E+  +  E  L+  L+ +  
Sbjct: 424 ENPVYYVQYAHARICSIFKEAQK--RGINYELF----LGLENLKEDEEKLLMRELSLFTN 477

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+  A I  +P  L  YL  +AS FH  +++      L  + A N +L   RL L HA  
Sbjct: 478 VLTKAVIQNKPNLLTQYLERVASRFHHFYNN------LSVLNAENYELIQGRLNLCHATK 531

Query: 568 SIINSGLNIIGVESPNEM 585
            +I  GL+I+GV +P  M
Sbjct: 532 IVIARGLSILGVNAPESM 549


>gi|170691609|ref|ZP_02882774.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143814|gb|EDT11977.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 596

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 191/587 (32%), Positives = 301/587 (51%), Gaps = 60/587 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  +   P     ++S  +AG G
Sbjct: 37  IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDTLLAQPQAQGLIESAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + ++ +++     YGR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLAAAAKQAVVKAVLAEKDVYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++++A  G++V RE+Y NDAG QI TLALS   R  + L   D+  P   Y G Y+ 
Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQAR-ARGLAPGDAGWPASAYNGEYIA 215

Query: 208 HVGKELADKYS------SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+  +  +        +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGVTVSASDGEPVTGARDVENLDAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   +  L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLY--TEGRVEKTVQALITAGKTYE----------------REGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + K+DG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV--------------VDEV-------G 418
             + +L ++V + R+G  +K+SKRAG ++T+R +              VD++       G
Sbjct: 378 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGALPGTEAAVDQIDEETIRRG 437

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  + K  +   +  
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKTRYGADEST 497

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++ P  SE     + L+  LAE+P ++++A     P+ +AFYL DLA  FH  +  
Sbjct: 498 LDSVDLAPLSSE---RSMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N R   V  ++      R+ L+ A   ++ +GL IIGV +P +M
Sbjct: 553 ---NDRAERVLVDDAAERNARVALLAATRQVLANGLAIIGVSAPVKM 596


>gi|83748526|ref|ZP_00945547.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207742125|ref|YP_002258517.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83724830|gb|EAP71987.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206593513|emb|CAQ60440.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 598

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 201/599 (33%), Positives = 300/599 (50%), Gaps = 75/599 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +V IAG G
Sbjct: 30  IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LSP+    +L+++   G  YG   +  G  V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+ + G++V RE+Y NDAG QI+ LA+SV  R  + L   ++  PE  Y G Y+ 
Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGLKPGEAGWPEAAYNGDYIA 208

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +    + + L  ++ ++V  +      DL+A  ++ D +  
Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +R  +D L   G  YE                    L  R+T  GDD D
Sbjct: 269 ESSLYA--DGKVRQTVDALIAAGKTYE----------------QDGALWLRTTDDGDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDGSYTYF  D+AY   K+ RGF  +I V GSDH G + R+ A      +   K 
Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-----------VDEV----------- 417
             + +L ++V + +DG  +K+SKRAG ++T+R +           VD +           
Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAEAGVDTIRACVESGAPSW 430

Query: 418 ------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-----R 466
                 G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  S+F     R
Sbjct: 431 PERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWHAR 490

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +  D+      DL          +     + L+  LA +P ++ +A     P+ +AFYL 
Sbjct: 491 EGGDVASLAGADL----AAVAGPDASPQAVALVQRLAAFPDMLADAARELAPHAVAFYLR 546

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P +M
Sbjct: 547 DLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQKM 598


>gi|154488020|ref|ZP_02029137.1| hypothetical protein BIFADO_01588 [Bifidobacterium adolescentis
           L2-32]
 gi|154083493|gb|EDN82538.1| hypothetical protein BIFADO_01588 [Bifidobacterium adolescentis
           L2-32]
          Length = 612

 Score =  286 bits (732), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 186/595 (31%), Positives = 313/595 (52%), Gaps = 74/595 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P   AEL  A +     + SV +AG GFIN
Sbjct: 52  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDFAELFAAELTNADGIKSVEVAGPGFIN 111

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++ +++ +G +YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 112 ITLDSASAAAVVDAVLEAGSDYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 171

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 172 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 225

Query: 211 KELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           K + D+ ++   ++L+ P      ++   P+ +  S Q           M   I+  +K 
Sbjct: 226 KRVIDEANADGVDVLSLPRVDGGADQDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKN 285

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +      +   I +L  +G +YE      K   T           F
Sbjct: 286 FRVNFDVWFHENSLYS--DGEVDQAIADLRARGDIYE------KDGAT----------WF 327

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+ 
Sbjct: 328 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRETNPADVAIYMLGADHHGYIGRMM 387

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+  A  +K  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + D +G D+ R+ + 
Sbjct: 388 AMCEAFGDKPGENMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 447

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A      +   D  L     
Sbjct: 448 RTDYNSPVDIDLNLLSSHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 505

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540
                   T++ +++  LA++P ++  A   + P+++A YL DLA+ +H  ++  R    
Sbjct: 506 --------TADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYHKWYNVERVVPM 557

Query: 541 --ENPRLRFVQANNRKL--------TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P  R  QA+  ++           RL+L  AV ++I  GL+++GV +P++M
Sbjct: 558 ELTDPEARGEQADAIRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVTAPDKM 612


>gi|207727725|ref|YP_002256119.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206590966|emb|CAQ56578.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 600

 Score =  286 bits (731), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 201/601 (33%), Positives = 300/601 (49%), Gaps = 77/601 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +V IAG G
Sbjct: 30  IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LSP+    +L+++   G  YG   +  G  V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+ + G++V RE+Y NDAG QI+ LA+SV  R  + L   ++  PE  Y G Y+ 
Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGLKPGEAGWPEAAYNGDYIA 208

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +    + + L  ++ ++V  +      DL+A  ++ D +  
Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +R  +D L   G  YE                    L  R+T  GDD D
Sbjct: 269 ESSLYA--DGKVRQTVDALIAAGKTYE----------------QDGALWLRTTDDGDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDGSYTYF  D+AY   K+ RGF  +I V GSDH G + R+ A      +   K 
Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417
             + +L ++V + +DG  +K+SKRAG ++T+R +             VD +         
Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAEAEAGVDTIRACVESGAP 430

Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465
                   G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  S+F    
Sbjct: 431 SWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490

Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D+      DL          +     + L+  LA +P ++ +A     P+ +AFY
Sbjct: 491 AREGGDVASLAGADL----TAVAGPDASPQAVALVQRLAAFPDMLADAARELAPHAVAFY 546

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P +
Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|78777988|ref|YP_394303.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|109895052|sp|Q30PL3|SYR_SULDN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78498528|gb|ABB45068.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 527

 Score =  286 bits (731), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 185/557 (33%), Positives = 302/557 (54%), Gaps = 46/557 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
            +++E+PRD + GH +T  A  L++ L   P+ IA+ I +  + D ++ S   + KG++N
Sbjct: 12  EVILEKPRDRSFGHFATPIAFALAKELKQSPMKIADEIASSFE-DNNIFSRVESVKGYLN 70

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             LS ++L +  S  + +   + +    K  K+ +EFVSANPTGP+H+GH R AV GDTL
Sbjct: 71  FRLSENFLSEYGSWALENPQTFAKQ--EKKEKILLEFVSANPTGPLHIGHARGAVYGDTL 128

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L    GY++T EYY+NDAG QI+ L LS+    ++ + +     PE YY G YL  + 
Sbjct: 129 FRLARHLGYDITAEYYVNDAGNQIDLLGLSIQLYGRENILHESVKYPESYYRGEYLAPLA 188

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E   K+  E+L+  +E     +  ++   +M+II+ DL   NI  D F+ E        
Sbjct: 189 HEAIKKFGLEILS--DESRQKELALWAKDGVMEIIKKDLANTNIFFDTFVYE-------- 238

Query: 271 SPIRDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           S + D  D  +A+ G   +GI         +K D    +L   S++ GDD DR +++ D 
Sbjct: 239 STLYDDWDRVMAKMG---DGIY--------KKDD----KLFIASSLKGDDDDRVVVREDA 283

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY A D+ Y   K+ERG+D+ I + G+DH GY+ R++A    +    A++ VLL ++V
Sbjct: 284 RPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIARVKASVEFLGYDSAKLEVLLSQMV 343

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L +DG P KMSKRAG+ I +  +V+E+GSD++RF+   +K+   L+FD  + K+Q   N
Sbjct: 344 SLLKDGEPYKMSKRAGNVILMSDIVEEIGSDALRFIFASKKSDTALEFDLAEFKKQDSSN 403

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P+FY+QYA+AR ++I  ++     DL  D      +      D S   L+      P ++
Sbjct: 404 PIFYIQYAHARIKTIIAKS-----DLSHDEIMSATLKN---LDESADMLMFDALLLPEIV 455

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E+A I+++  KL  YL  LA+  H  +   R         A+  KL  + + +  +    
Sbjct: 456 EDAFISRQVQKLPEYLKSLAASLHKFYYDCR-----IIGTADEAKLLKLLMLVGLS---- 506

Query: 570 INSGLNIIGVESPNEMS 586
           + +GL ++G+E+ + MS
Sbjct: 507 LKTGLALMGIEAKDYMS 523


>gi|296160343|ref|ZP_06843160.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889324|gb|EFG69125.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 596

 Score =  286 bits (731), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 190/587 (32%), Positives = 299/587 (50%), Gaps = 60/587 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  +   P     V++  +AG G
Sbjct: 37  ITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPGARDLVEAAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + +++++      +GR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLTAAAKQAVIAAVFAEKERFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++++A  G++V RE+Y NDAG QI TLALS   R  + L   D   P   Y G Y+ 
Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIQTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215

Query: 208 HVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+      +A      +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   ++     +   +  L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLYK--EGRVEKTVAALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + K+DG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------EV------------G 418
             + +L ++V + R+G  +K+SKRAG ++T+R +++         EV            G
Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEVDVDLIDEETIRRG 437

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF +  RK      FD     +Q+ ENPV YVQYA+AR  S+  + K  +   +  
Sbjct: 438 RDAVRFFLTSRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYNTDEST 497

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V P  SE     + L+  LAE+P ++++A     P+ +AFYL DLA  FH  +  
Sbjct: 498 LADVDVTPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N +   V  ++      R+ L+ A   ++ +GL  IGV +P +M
Sbjct: 553 ---NDKAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596


>gi|154501138|ref|ZP_02039176.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC
           29799]
 gi|150269830|gb|EDM97365.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC
           29799]
          Length = 582

 Score =  286 bits (731), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 185/573 (32%), Positives = 306/573 (53%), Gaps = 44/573 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89
           +  IE P+D +HG  +++ AM  ++ L + P  IA++I+  ++++     S  IAG GF+
Sbjct: 36  KATIEIPKDVSHGDYASSFAMAGAKALHMAPRAIAQIILDHLELEGTYFQSAEIAGPGFL 95

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L   +  ++++ I   G+ YG    G G KV +EFVSANPTGPMH+G+ R  V+GD+
Sbjct: 96  NFRLGSRWYGEVIADIEREGMTYGAVDEGHGEKVMVEFVSANPTGPMHIGNARGGVLGDS 155

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKH 208
           LAS++  +GY+V RE+Y+NDAG QI+  ALS+  RY+Q +   ++   PE  Y G  +K 
Sbjct: 156 LASVLERAGYDVWREFYVNDAGNQIHKFALSIDTRYRQLILGEENVPFPEDCYQGDDIKE 215

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +      ++    ++  EE+    + ++ ++  +  +++DL+   I+++ +  E   H  
Sbjct: 216 LAAAFRAEHGDSWVDKSEEERQEAMANFGLKRNIPKMQEDLRRYKIEYNEWFLESTLH-- 273

Query: 269 DPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   + + +  L+ +G+ YE  G L      TT+      K+   R     + VD+  LK
Sbjct: 274 NSGYVAETVGMLSDKGWTYEKDGALWL---NTTELL----KEKYMREGKTREQVDKLDLK 326

Query: 327 SD------GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
            D      G YTYFAAD+AY + K E RGF   I + G+DH G+V RL+A    +  +  
Sbjct: 327 DDVLRRANGFYTYFAADIAYHRNKLEKRGFQTAINIWGADHHGHVARLQAALDGLGLDGS 386

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
            ++ V+L +LV L +DG P++MSKR+G  I LR ++DEV  D+ R+    R  +  LDFD
Sbjct: 387 HRLVVVLMQLVNLLQDGKPVRMSKRSGKAIALRDLLDEVSVDACRYFFNSRSFTSPLDFD 446

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---- 494
                ++  +NPV+YVQYA+AR  S+  + K+              +   S  D S    
Sbjct: 447 LDLAVKEDSDNPVYYVQYAHARICSLVARMKE----------EEASVSAASAIDASVFST 496

Query: 495 --ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             EL L+  L+ +P  I  A+   +P  +  YL  LA  FH  ++  R       ++   
Sbjct: 497 PEELALVKTLSLFPEEIRLASRDYDPSHINRYLLTLAGDFHRFYNACR-------IKGEE 549

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL+L   V S++ +G+ +IGV +P +M
Sbjct: 550 EHVLAARLKLADTVRSVLANGMALIGVTAPEKM 582


>gi|171742108|ref|ZP_02917915.1| hypothetical protein BIFDEN_01214 [Bifidobacterium dentium ATCC
           27678]
 gi|283456769|ref|YP_003361333.1| arginyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171277722|gb|EDT45383.1| hypothetical protein BIFDEN_01214 [Bifidobacterium dentium ATCC
           27678]
 gi|283103403|gb|ADB10509.1| arginyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 596

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 187/596 (31%), Positives = 312/596 (52%), Gaps = 72/596 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           + ++ + RP+D AHG  ++NAAM L++  G+ P  +AEL  A +     + SV +AG GF
Sbjct: 34  VSKLTVMRPKDRAHGDWASNAAMQLAKKAGMKPHDLAELFAAELAQSDGIKSVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN+ L  +    ++ +++ +G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD
Sbjct: 94  INIVLDSASAAAVVDAVLEAGNAYGKNDHLGGETLNLEFVSANPTGPIHIGGTRWAAVGD 153

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  
Sbjct: 154 SMARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDE 207

Query: 209 VGKELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDL 249
           + + + D+  S   ++L+ P      ++K  P+ +  S Q           M   IR  +
Sbjct: 208 IAQRVIDEAKSDGIDILDLPRIDGGKDDKGEPLGEGDSEQREEFRKRAVPMMFDEIRRSM 267

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K   +  D++  E+  +      +   I +L  +G +YE      K   T          
Sbjct: 268 KNFRVNFDVWFHENSLYSN--GEVDKAIADLRERGDIYE------KDGAT---------- 309

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKR 366
            F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R
Sbjct: 310 WFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREADPADVAIYMLGADHHGYIGR 369

Query: 367 LEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + A+ AA  ++  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + + +G D+ R+ 
Sbjct: 370 MMAMCAAFGDEPGRNMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTEAIGVDASRYS 429

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +     +  +D D   +   S ENPV+YVQYA+AR  ++ R A       D         
Sbjct: 430 LARTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYDG-------- 481

Query: 486 PQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536
              S  DT ++ +++  LA++P ++  A   + P+++A YL DLA+ +H  W        
Sbjct: 482 ADVSLLDTVADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 540

Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + G +   +R  +A        RL+L  AV ++I  GL+++GV +P+ M
Sbjct: 541 MALTDPEARGEDAEAVRIAKAPEPARAAARLKLNDAVRTVIAEGLDLLGVTAPDRM 596


>gi|91781601|ref|YP_556807.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123359228|sp|Q146I4|SYR_BURXL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91685555|gb|ABE28755.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 596

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 190/587 (32%), Positives = 300/587 (51%), Gaps = 60/587 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  +   P     V++  +AG G
Sbjct: 37  ITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPGARDLVEAAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + +++++      +GR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLTAAAKQAVIAAVFAEKERFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++++A  G++V RE+Y NDAG QI TLALS   R  + L   D   P   Y G Y+ 
Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIQTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215

Query: 208 HVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+      +A      +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGATVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   ++     +   +  L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLYK--EGRVEKTVAALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + K+DG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------EV------------G 418
             + +L ++V + R+G  +K+SKRAG ++T+R +++         EV            G
Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEVDVDLIDEETIRRG 437

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  + K  +   +  
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYNMDEST 497

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V P  SE     + L+  LAE+P ++++A     P+ +AFYL DLA  FH  +  
Sbjct: 498 LADVDVTPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N +   V  ++      R+ L+ A   ++ +GL  IGV +P +M
Sbjct: 553 ---NDKAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596


>gi|306822087|ref|ZP_07455470.1| arginine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802514|ref|ZP_07696619.1| arginine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304554636|gb|EFM42540.1| arginine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220831|gb|EFO77138.1| arginine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 596

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 187/596 (31%), Positives = 312/596 (52%), Gaps = 72/596 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           + ++ + RP+D AHG  ++NAAM L++  G+ P  +AEL  A +     + SV +AG GF
Sbjct: 34  VSKLTVMRPKDRAHGDWASNAAMQLAKKAGMKPHDLAELFAAELAQSDGIKSVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN+ L  +    ++ +++ +G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD
Sbjct: 94  INIVLDSASAAAVVDAVLEAGNAYGKNDHLGGETLNLEFVSANPTGPIHIGGTRWAAVGD 153

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  
Sbjct: 154 SMARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDE 207

Query: 209 VGKELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDL 249
           + + + D+  S   ++L+ P      ++K  P+ +  S Q           M   IR  +
Sbjct: 208 IAQRVIDEAKSDGIDILDLPRIDGGKDDKGEPLGEGDSEQREEFRKRAVPMMFDEIRRSM 267

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K   +  D++  E+  +      +   I +L  +G +YE      K   T          
Sbjct: 268 KNFRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIYE------KDGAT---------- 309

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKR 366
            F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R
Sbjct: 310 WFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREADPADVAIYMLGADHHGYIGR 369

Query: 367 LEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + A+ AA  ++  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + + +G D+ R+ 
Sbjct: 370 MMAMCAAFGDEPGRNMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTEAIGVDASRYS 429

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +     +  +D D   +   S ENPV+YVQYA+AR  ++ R A       D         
Sbjct: 430 LARTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYDG-------- 481

Query: 486 PQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536
              S  DT ++ +++  LA++P ++  A   + P+++A YL DLA+ +H  W        
Sbjct: 482 ADVSLLDTVADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 540

Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + G +   +R  +A        RL+L  AV ++I  GL+++GV +P+ M
Sbjct: 541 MALTDPEARGEDAEAVRIAKAPEPARAAARLKLNDAVRTVIAEGLDLLGVTAPDRM 596


>gi|194337845|ref|YP_002019639.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229470726|sp|B4SH34|SYR_PELPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194310322|gb|ACF45022.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 552

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 187/567 (32%), Positives = 294/567 (51%), Gaps = 49/567 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89
           +I+IE+P D   G  STN A++ ++    +P  +A+ I+  +   PD +  + +AG GFI
Sbjct: 23  QIIIEQPADKKFGDFSTNIALLAAKECRRNPRELAQTIIEHLSFPPDTIAKIEVAGAGFI 82

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N YL+P ++ + +  +++ G EYG+   GKG K  +E+VSANPTGP+ +G  R  V+GD 
Sbjct: 83  NFYLTPLFIMQSVEQVLLDGDEYGKGESGKGEKAIVEYVSANPTGPLTIGRGRGGVLGDC 142

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A+L A  GY VTREYY NDAG Q+  L  SV +RY +       + P  +Y G Y+  +
Sbjct: 143 IANLFATQGYAVTREYYFNDAGRQMQILGESVRFRYLERC-GETIEFPATHYQGEYIGEI 201

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +EL + + + L +  +   + I K  + + +   IR  L+ L I+HD F +E   +  D
Sbjct: 202 AEELFNDHGTALADSTD---VQIFKKRAEEIIFASIRKTLERLGIRHDSFFNEHTLYTPD 258

Query: 270 PSPI---RDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
              +   + +ID L  + ++  Y+G                     F +T +G + D+ L
Sbjct: 259 AGGVTGNQRVIDALREKEFIAEYDG------------------ATWFLTTKLGQEKDKVL 300

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
           +KS G  +Y   D+AY   KYERGF  ++ V G+DH   Y   LEA+     + +  I +
Sbjct: 301 IKSSGEPSYRLPDIAYHITKYERGFGMIVNVFGADHIDEYPDVLEALKILGYDTR-HIKI 359

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            + + V    DG  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K
Sbjct: 360 AINQFVTTTVDGQTLKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDVELAK 419

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           +QSK+NPVFY+QYA+AR  S+ R A+     D     +  L  R   P       +ELQL
Sbjct: 420 KQSKDNPVFYLQYAHARICSLLRMAQQEIGFDATSSPELHLLQRLTSP-------AELQL 472

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              L +YP +I+ +    EP K+  YL+ LA  FH  +   +E P L+        +   
Sbjct: 473 GSALLDYPDMIKTSLRLLEPQKMVEYLHSLAECFHRFY---QECPILK----AEPDIARA 525

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   ++ +G  I+GV +P  M
Sbjct: 526 RLFLSVATRQVLRNGFRILGVSAPESM 552


>gi|310286780|ref|YP_003938038.1| arginyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|311063676|ref|YP_003970401.1| arginyl-tRNA synthetase ArgS [Bifidobacterium bifidum PRL2010]
 gi|309250716|gb|ADO52464.1| arginyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|310865995|gb|ADP35364.1| ArgS Arginyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 598

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 307/597 (51%), Gaps = 76/597 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P  +AEL   R+     + +V +AG GFIN
Sbjct: 36  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAELFAERLTAADGISTVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++  ++  G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 96  ITLDSASAAAVVDKVLADGAGYGKNAHLGGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGKYINEIA 209

Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
             +   A+    ++L+ P      ++   P+ +  S Q           M   I+  +K 
Sbjct: 210 DRVIAEAEADGVDVLSLPRVDGGLDKDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKE 269

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             ++ D++  E++ ++     +   I+ L  +G ++E      K   T           F
Sbjct: 270 FRVRFDVWFHENNLYK--DGEVDRAIEELRSRGDIFE------KDGAT----------WF 311

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KS+G + YFAAD+AY+  K  R  D     IY++G+DH GY+ R+ 
Sbjct: 312 ESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLGADHHGYIGRMM 371

Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA   E    + +L+ +LV + ++G P++MSKRAG+ +T+  +V+ VG D+ R+ + 
Sbjct: 372 AMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEAVGVDAARYSLA 431

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A          D  L     
Sbjct: 432 RTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTEGADLSLL---- 487

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540
              ++E D    +++  LA++P  +  A   + P+K+A YL DLA  +H  ++  R    
Sbjct: 488 ---DTEADG---EVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVPM 541

Query: 541 --ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P  R   A    L +           RL+L  AV ++I SGL+++GV +P++M
Sbjct: 542 ALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM 598


>gi|163854373|ref|YP_001628671.1| arginyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229558756|sp|A9HVX4|SYR_BORPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163258101|emb|CAP40400.1| argS [Bordetella petrii]
          Length = 561

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 186/570 (32%), Positives = 295/570 (51%), Gaps = 50/570 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV----ARIKIDPDVDSVFIAGK 86
           ++++ERP+  AHG ++TN AM L++P   +P  +A+ IV    A       V++  IAG 
Sbjct: 27  QVLLERPKVAAHGDVATNIAMQLAKPARRNPRELAQGIVDALMAETAARALVENAEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  ++ +  + ++ ++   G  YG +    G KV +EFVSANPTGP+HVGH R A +
Sbjct: 87  GFINFRITAAARQAVIQAVAEQGEAYG-HAPATGEKVLVEFVSANPTGPLHVGHARQAAL 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +  L A +G +VTRE+Y NDAG QI  LA+SV  R  + +  +  D P   Y G Y+
Sbjct: 146 GDAICRLYAATGRDVTREFYYNDAGNQIQNLAVSVQAR-ARGIAPDSPDYPADGYKGDYI 204

Query: 207 KHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFI 260
             + ++   + + +  +         +  + D  V A+  + R+   DL+A  +  D + 
Sbjct: 205 VDIAQDFIARKTLQAADGAAVTASGDVDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYY 264

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318
            E   +      +   +  L  +G+ YE                    L  R+T +  GD
Sbjct: 265 LESSLYTS--GRVEQTVQALVAKGHTYE----------------QDGALWLRTTELGTGD 306

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK- 377
           D DR + KS+G YTYF  D+AY K K+ERGF + + + GSDH G V R+ A   A+ E  
Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKAKWERGFRHAVNIQGSDHHGTVARVRAGLQALEEGI 366

Query: 378 -KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K     +L ++V++ R G  +K+SKRAG ++TLR ++D VG D+VR+ ++ R+      
Sbjct: 367 PKDYPAYVLHKMVKVMRGGEEVKISKRAGSYVTLRDLIDWVGRDAVRYFLIQRRADTEFV 426

Query: 437 FDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           FD      +S ENPV+Y+QYA+AR C  I     D   D         ++   +EF    
Sbjct: 427 FDIDLALSKSDENPVYYIQYAHARICSMIANAGAD---DARIAQADTALLTAPTEF---- 479

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  LA +P+++  A     P+ +AF+L D AS FH  ++  R       V  ++  L
Sbjct: 480 -ALMQRLASFPQIVAQAAQELAPHHIAFWLRDCASDFHAWYNAER-------VLVDDEPL 531

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + RL+L      ++ +GL ++GV +P  M
Sbjct: 532 KLARLRLAATTRQVLANGLALLGVSAPQRM 561


>gi|296126409|ref|YP_003633661.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018225|gb|ADG71462.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 529

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 197/578 (34%), Positives = 297/578 (51%), Gaps = 65/578 (11%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           + L++YLK+ D K     +I   I I    D   G  +  AAM L++ L  +PL IA  I
Sbjct: 12  TALEDYLKDTDVK-----EIDSYIEIGYAADDKFGDYACPAAMRLAKVLKKNPLEIAASI 66

Query: 69  VARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
               KID    + +     GFINL LS +Y+ + ++ ++ +   YG+N +    K+ IE+
Sbjct: 67  TE--KIDKKYFEKIEAVKPGFINLTLSYNYINECINDLL-NNDNYGKNTVEDKKKILIEY 123

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+H+GH R A +G  L++++ ++G+EV +E+Y+NDAG QI  L  SV      
Sbjct: 124 VSANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESV------ 177

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                  ++PE  Y G Y+K V K         L   P        KD  +++  K+   
Sbjct: 178 NAVKEGREIPEDGYHGEYIKEVAK---------LDGVP--------KDIILESQKKL--- 217

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L+      D + SE     G    +   +D L ++G ++E                +  
Sbjct: 218 -LERFGTHMDNYASELKIREG--GELEKTMDFLDKEGLLFE----------------EDN 258

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + FRST  GDD DR + KS+GSYTYFA D+ Y K K +RG+  +I ++G+DH GYV R+
Sbjct: 259 AVWFRSTKYGDDKDRVVKKSNGSYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPRI 318

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            A   AVS+  A + V+L +LVRLYR    ++MSKR GD I+L  V+DE+G D  R+ +L
Sbjct: 319 TAAVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFLL 378

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R  S  LDFD    K++  +NPV+YVQYAYAR  +IF + ++     D D  P ++   
Sbjct: 379 MRSYSSSLDFDLELAKKKDNDNPVYYVQYAYARVCNIFFKMEEKNMSYD-DAKPFDISKI 437

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            +E   S L+L   +  +P  +  +  + E Y L  Y Y++AS  H  +           
Sbjct: 438 ANE---SSLKLAKIILRFPDEVYESAKSLEVYTLINYTYEIASALHKFYYDN-------I 487

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V   N ++   RL LV AV  ++    +IIG+     M
Sbjct: 488 VLEENAEIRQERLTLVKAVKKVLGLCFDIIGISKVERM 525


>gi|227503835|ref|ZP_03933884.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199659|gb|EEI79707.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 553

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 184/581 (31%), Positives = 298/581 (51%), Gaps = 33/581 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D S  +K     +  + +++  +L + + +ERPR+  HG  +TN A+ +++  G++P  +
Sbjct: 5   DLSVLIKETAVAVLSEHELDTAVLPETVTVERPRNPEHGDYATNLALQVAKKAGVNPREL 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A  +   +     +D   IAG GF+N+ L+ +    I+  +  +G  YG N   KG K+N
Sbjct: 65  ATWLAEALAKHDAIDVAEIAGPGFLNIRLAAAAQGAIVDQVRQAGTNYGHNDAYKGQKIN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+   
Sbjct: 125 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFSNSLVAA 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y++ +   + ++   + L   E++     +   V+ M   
Sbjct: 185 AK------GEPTPEDGYGGEYIQEIAANVQNQVP-DALEGTEDEVREKFRAAGVEMMFAH 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++ L    +  D++  E+               +L   G V + +      K  +K   
Sbjct: 238 IKESLHEFGVDFDVYFHEN---------------SLFESGAVDKAV---AHLKDNEKLYF 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +      +ST  GDD DR ++KSDG   Y A D+AY   K++RG D  IY++G+DH GY+
Sbjct: 280 EDGAWWLKSTDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYI 339

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL A AAA+     Q+ VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D  R+
Sbjct: 340 ARLRAAAAAMGYNPEQVEVLIGQMVNLLRDGKAVRMSKRAGTVITLDDLVEAIGVDGARY 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++     + +D D      QS +NPV+YVQY +AR  SI R+A+    +L  D      
Sbjct: 400 SLVRSSVDQSIDIDLGLWASQSSDNPVYYVQYGHARICSILRKAQ----ELGLDAAAMAD 455

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                     E  LI  L E+P V+  A   +EP+++A +  DLA+VFH  +   +  P+
Sbjct: 456 ADLALLTHEKEGDLIRTLGEFPEVVSTAATLREPHRIARFAEDLAAVFHRFYDQCQVLPK 515

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + + + RL L  A   ++ + L ++GV +P +M
Sbjct: 516 ---AGEETQPIHIARLALADAARQVLANALTMVGVSAPEKM 553


>gi|293363536|ref|ZP_06610292.1| arginine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552885|gb|EFF41639.1| arginine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 545

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 197/589 (33%), Positives = 302/589 (51%), Gaps = 70/589 (11%)

Query: 21  KIKVEKKILDRI-VIERPRDCA----------HGHLSTNAAMILSRPLGLDPLTIAELIV 69
           KI+++ KIL+ + +I +  + A          +   ST+ A+I   P  L+P+ +A LI 
Sbjct: 3   KIELKSKILEELKLIAKELNLAKEPFLIEPKTNADFSTSMAIINKTP-ELNPIALANLIK 61

Query: 70  ARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++    +   ++ V +AG GFINL+L+ +Y+ + ++ I+  G  YG+    K   +NIE
Sbjct: 62  EKLLTKSNELYLEEVEVAGPGFINLFLNKNYIVQAINDILKKGKNYGKG--NKKGSINIE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A +G T+A++  F+G ++TREYYINDAG QI+ LA S+F RYQ
Sbjct: 120 WVSANPTGYLHVGHARNAAIGSTVANICEFAGLKITREYYINDAGNQIDLLANSLFSRYQ 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKII 245
           Q L+N D  +PE  Y G  ++    ++  +Y+ +      E + L + K   V+  +  I
Sbjct: 180 Q-LFNKDYPMPEECYRGEDIQWAADQMFKRYADKFKGIKLEGQVLEVFKKDGVELFLGEI 238

Query: 246 RDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           + DL+    I+ DI+ SE   +  D   I+D +                 K K T + D 
Sbjct: 239 KKDLEKFGGIKFDIWFSEKSLYENDQKIIKDAL----------------AKIKNTYQKD- 281

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM---GSDHS 361
                   +T+ GDD DR L+KSDGS TYF  D+AY   KY R  D    VM   G+DHS
Sbjct: 282 --GATWLNTTLHGDDKDRVLVKSDGSLTYFTPDIAYHNIKYHRNNDKDTVVMNVWGADHS 339

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+KR++     +      + VL  +LVRL ++G   KMSKR G    LR  VD VG DS
Sbjct: 340 GYIKRMKCAMEDIGNNPDNLVVLCMQLVRLVKNGEEYKMSKRRGTSFFLREFVDLVGVDS 399

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF++L R  +  LDFD    K ++ +NP   VQYA AR  S+ ++       L+   F 
Sbjct: 400 ARFILLDRTYNSKLDFDIDIAKNKTNDNPAILVQYANARAYSLLQKTTYDLNKLEMKTFN 459

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH--- 538
            +V          + +LI  L E+P +I+ +        L  YL  LA  F+  +S+   
Sbjct: 460 SDV----------DQKLISTLLEFPEIIDKSADLYMTNILTQYLIKLAKDFNSWYSNSDK 509

Query: 539 --GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             G EN                 L LV +  +++ +G+ +IG+   ++M
Sbjct: 510 VIGHENEE-------------SLLALVKSTNTVLETGMKLIGITINHKM 545


>gi|300705360|ref|YP_003746963.1| arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299073024|emb|CBJ44381.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 600

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 300/601 (49%), Gaps = 77/601 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +V IAG G
Sbjct: 30  IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LSP+    +L+++   G  YG   +  G  V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+ + G++V RE+Y NDAG QI+ LA+SV  R  + L   ++  PE  Y G Y+ 
Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGLKPGEAGWPEAAYNGDYIA 208

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +    + + +  ++ ++V  +      DL+A  ++ D +  
Sbjct: 209 DIAADYLAGKTVRASDGEPVTGACDVENIEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +R  +D L   G  YE                    L  R+T  GDD D
Sbjct: 269 ESSLYA--DGKVRQTVDALIAAGKTYE----------------QDGALWLRTTDDGDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDGSYTYF  D+AY   K+ RGF  +I V GSDH G + R+ A      +   K 
Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417
             + +L ++V + +DG  +K+SKRAG ++T+R +             VD +         
Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGAP 430

Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465
                   G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  S+F    
Sbjct: 431 SWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490

Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D+      DL          +     + L+  LA +P ++ +A     P+ +AFY
Sbjct: 491 AREGGDVASLAGADL----AAVAGPDASPQAVALVQRLAAFPDMLADAARELAPHAVAFY 546

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P +
Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|188590897|ref|YP_001795497.1| arginyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692922|sp|B2AG76|SYR_CUPTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170937791|emb|CAP62775.1| ARGINYL-tRNA SYNTHETASE (ARGININE--tRNA LIGASE) PROTEIN
           [Cupriavidus taiwanensis LMG 19424]
          Length = 595

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 200/595 (33%), Positives = 295/595 (49%), Gaps = 64/595 (10%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IA 84
           L  +  ERP+  AHG L+ N AM ++R L  +P  +A+ IVA ++ D     +     IA
Sbjct: 27  LPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRIVAAVEADARAQGLVAGMDIA 86

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFINL L+PS    +L +++  G  YG    G   +V +EFVSANPTGP+HVGH R A
Sbjct: 87  GPGFINLRLTPSAKADVLRAVLNEGDHYGARERGVHGQVLVEFVSANPTGPLHVGHGRQA 146

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV  R  + L   D+  PE  Y G 
Sbjct: 147 ALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR-ARGLKPGDASWPEAAYNGD 205

Query: 205 YLKHVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDI 258
           Y+  +  + LA K  S     P      +     ++ ++V  +      DL+A  ++ D 
Sbjct: 206 YIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAVTYLRNEQDIDLQAFGVKFDR 265

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +      +   + +L  +G  YE                    L  R+T  GD
Sbjct: 266 YYLESSLY--SDGRVDAAVQSLIDKGKTYE----------------SEGALWLRTTDDGD 307

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376
           D DR + KSDG+YTYF  D+AY   K+ERGF  +I V GSDH G + R+ A      +  
Sbjct: 308 DKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGI 367

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV------------- 417
            +   + +L ++V + ++G  +K+SKRAG ++T+R ++      DE              
Sbjct: 368 PQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLEQGVADWP 427

Query: 418 -----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
                G D+VRF +L RK      FD     +Q+ ENPV+YVQYA+AR  SIF       
Sbjct: 428 AHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFESWGGAD 487

Query: 473 PDLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            +          +   +  D S   L L   LAE+P ++  A     P+ +AFYL DLA 
Sbjct: 488 WESRLAELAGADLSAVTGADASAQALALGRRLAEFPDMLAAAAAELAPHAVAFYLRDLAG 547

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P  M
Sbjct: 548 DFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM 595


>gi|299068188|emb|CBJ39407.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 600

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 298/601 (49%), Gaps = 77/601 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +V IAG G
Sbjct: 30  IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LSP+    +L+++   G  YG   +  G  V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLSPTARTDVLTAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+ + G++V RE+Y NDAG QI+ LA+SV  R  +     D+  PE  Y G Y+ 
Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGFKPGDAGWPEAAYNGDYIA 208

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +    + + +  ++ ++V  +      DL+A  ++ D +  
Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENMEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      ++  +D L   G  YE                    L  R+T  GDD D
Sbjct: 269 ESSLYA--DGKVQQTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDGSYTYF  D+AY   K+ RGF  +I V GSDH G + R+ A      +   K 
Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417
             + +L ++V + +DG  +K+SKRAG ++T+R +             VD +         
Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDVESEAGVDTIRACVDSGAP 430

Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465
                   G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  S+F    
Sbjct: 431 NWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490

Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D       DL          E     + L+  +A +P V+ +A     P+ +AFY
Sbjct: 491 AREGGDAASLAGADL----AAVAGPEASPQAVALVQRIAAFPDVLADAARELAPHAVAFY 546

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P +
Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|229817124|ref|ZP_04447406.1| hypothetical protein BIFANG_02382 [Bifidobacterium angulatum DSM
           20098]
 gi|229784913|gb|EEP21027.1| hypothetical protein BIFANG_02382 [Bifidobacterium angulatum DSM
           20098]
          Length = 596

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 187/596 (31%), Positives = 307/596 (51%), Gaps = 76/596 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D AHG  ++NAAM L++  G+ P   AEL  A +     + SV +AG GFIN
Sbjct: 36  KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDFAELFAAELVKADGIKSVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++ +++ +G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 96  IVLDSASAAAVVDAVLEAGSAYGKNDHLGGETLNLEFVSANPTGPIHIGGTRWAAVGDSM 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A  + ++   +G Y G Y+  + 
Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV-----AAAHGETTPIDG-YKGAYIDEIA 209

Query: 211 KELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
           + + D+ ++   ++LN P      +E   P+ +  S Q           M   I+  +K 
Sbjct: 210 QRVIDEATADGVDILNLPRVDGGSDENGEPLGEGDSEQREEFRKRAVPMMFDEIQKSMKN 269

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++  E+  +      +   I +L  +G ++E      K   T           F
Sbjct: 270 FRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIFE------KDGAT----------WF 311

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R     D  IY++G+DH GY+ R+ 
Sbjct: 312 ASTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREVNPADVAIYMLGADHHGYIGRMM 371

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+  A  +K  + + +L+ +LV + +DG  ++MSKRAG+ +T+  + D +G D+ R+ + 
Sbjct: 372 AMCEAFGDKPGENMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 431

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A      +   D  L     
Sbjct: 432 RTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAATAGITYEGADLSLLD--- 488

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536
            P + E       ++  LA++P ++  A   + P+++A YL DLA+ +H  W        
Sbjct: 489 TPADGE-------VLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 540

Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + G E   LR  +A        RL+L  AV ++I  GL+++G  +P +M
Sbjct: 541 MELTDPEARGEEAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGCAAPEKM 596


>gi|94267070|ref|ZP_01290710.1| Arginine--tRNA ligase [delta proteobacterium MLMS-1]
 gi|93452227|gb|EAT02881.1| Arginine--tRNA ligase [delta proteobacterium MLMS-1]
          Length = 558

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 185/560 (33%), Positives = 294/560 (52%), Gaps = 40/560 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGF 88
            +E P+    G  +TN AM+++     +P  +A  +V  +  +     +F    +AG GF
Sbjct: 32  AVEEPKRAGQGDFATNLAMVVAGREKRNPRELAGQLVELLNGEEAARGLFARIEVAGPGF 91

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N +L P+  ++++  I   G E+ R+ +G G KV +EFVSANPTGP+ VGH R AV+GD
Sbjct: 92  VNFFLHPAVWQQVVPEIRRRGGEFARSTVGGGRKVLVEFVSANPTGPLSVGHGRQAVLGD 151

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +A L+  +G+ VTREYY NDAG Q+  L  S   RY + L    ++ PE  Y G Y++ 
Sbjct: 152 AIARLLEATGHAVTREYYYNDAGRQMRVLGESTRARYLEEL-GLPAEFPEDGYQGEYIRE 210

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + +EL  +       + ++         + +A+   I + L  L I+ D + +E   +  
Sbjct: 211 IARELVAQQGD---GWRDQSDTAPFTARAEEAIFADINNTLARLGIKFDNYYNERSLY-- 265

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   I D++  L  +G VYE                    + F+++ +G + DR ++KS 
Sbjct: 266 EKGLIDDVVAILRDKGLVYE----------------QDGAVWFKTSALGLEQDRVIIKSS 309

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TY   D+AY + K+ RGFD M+ V GSDH   V  + A   A+     ++  ++ + 
Sbjct: 310 GEPTYRLPDIAYHREKFRRGFDWMVNVFGSDHIATVPDVLAGVRALGYDSQRVTPVIHQF 369

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V L RDG  +KMS R   F+T+  +++EVG+D  RF  L RK    L+FD      QS+E
Sbjct: 370 VTLLRDGQQVKMSTRKATFVTVDELLEEVGADVTRFFFLMRKADSQLEFDLALAASQSQE 429

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI--PQESEFDTSELQLIVHLAE-Y 505
           NPV+YVQYA+AR  SI RQA          L P +    P  S    +E   ++      
Sbjct: 430 NPVYYVQYAHARLCSIARQAA----AQGLQLAPSDAADGPDYSLLGEAEELELLAAMAGL 485

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++E+A +A EP++L FYL DLA+ FHG+++  R       +  +++ L++ RL L  A
Sbjct: 486 PSLLESAALALEPHRLVFYLQDLAARFHGYYNRHR-------IVGDDQALSLARLALADA 538

Query: 566 VASIINSGLNIIGVESPNEM 585
           +  +I   L +IGV++P  M
Sbjct: 539 LRRVIADTLGLIGVKAPESM 558


>gi|300870723|ref|YP_003785594.1| arginyl-tRNA synthetase ArgS [Brachyspira pilosicoli 95/1000]
 gi|300688422|gb|ADK31093.1| arginyl-tRNA synthetase, ArgS [Brachyspira pilosicoli 95/1000]
          Length = 529

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 289/576 (50%), Gaps = 65/576 (11%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L NYLK+ID +      I   I I    D   G  ++  AM L++ L  +P  IA  IV 
Sbjct: 14  LCNYLKDIDVE-----NIDSYIDIGYTVDEKFGDYASPVAMRLAKALKKNPFDIANDIVK 68

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            I      D+V +A  GFINL LS  Y+ + ++ ++    +YG+N      ++ +E+VSA
Sbjct: 69  LID-KKYFDNVEVARPGFINLTLSKDYINECINQLLEDD-DYGKNSAEDKKRILVEYVSA 126

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+GH R A +G  L++++ + G++V +E+Y+NDAG QI  L  SV         
Sbjct: 127 NPTGPLHIGHGRWAAIGSALSNILKYVGHDVYQEFYVNDAGEQITKLNESV------NAV 180

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
               ++PE  Y G Y+K + K         +   P        KD  ++   K+    L+
Sbjct: 181 KEGREIPEDGYHGAYIKDIAK---------MEGVP--------KDIILEQQRKL----LE 219

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 D + SE     G    +   ID L  +G ++E                +     
Sbjct: 220 RFRTYMDNYASELKIREG--GELEKTIDYLNEKGLLFE----------------EDNATW 261

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           FRST  GDD DR + KS+GSYTYFA D+ Y K K +RG+  +I ++G+DH GYV R+ A 
Sbjct: 262 FRSTEYGDDKDRVVKKSNGSYTYFAPDITYHKNKIDRGYKYLIDILGADHHGYVPRITAA 321

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             AVS+  A + V+L +LVRLYR    ++MSKR GD I+L  V+DE+G D  R+ +L R 
Sbjct: 322 VRAVSDDTADLKVILGQLVRLYRGNELVRMSKRTGDMISLEEVIDEIGVDPTRYFLLMRS 381

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNVIPQES 489
            S  LDFD    K++  +NPV+YVQYAYAR  +IF + ++     D++  F  N I  E 
Sbjct: 382 YSSSLDFDLELAKKKDNDNPVYYVQYAYARVCNIFFKLEEKNMKYDYNKKFDINKISNE- 440

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               S L+L   +  +P  I  +  + E Y L  Y YD+AS  H  +           V 
Sbjct: 441 ----STLKLAKMILRFPDEIYESAKSLEVYTLLNYTYDVASALHKFYYDN-------IVL 489

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N  +   RL L+ AV  I+    +IIG+     M
Sbjct: 490 EENDDIRQERLTLIRAVKKILGICFDIIGITKIERM 525


>gi|118474762|ref|YP_892573.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166232772|sp|A0RQU0|SYR_CAMFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118413988|gb|ABK82408.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 531

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 173/561 (30%), Positives = 300/561 (53%), Gaps = 44/561 (7%)

Query: 27  KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++L R  ++E+P+D    H +T  A  L++     P  IA  +  + +     D   I  
Sbjct: 11  RVLGRDFILEKPKDKNLAHYATPFAFSLAKEFKKSPAIIASQLALKFENHELFDVFSI-- 68

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            G++N  L   +L  + ++ +     +G         + IE++SANPTGP+H+GH R AV
Sbjct: 69  NGYLNFKLKGEFLNSLANNALSLAESFGSKKPQSQKDIFIEYISANPTGPLHIGHVRGAV 128

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GDTLA +  + G +V  EYYINDAG QI+ L +S+    ++AL+N +   P+ YY G Y
Sbjct: 129 YGDTLARVARYIGLDVFTEYYINDAGNQIDLLGISISLFAREALFNENVQYPDKYYRGEY 188

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           ++ + K    K+  ++  + E + L +  ++    ++KII+ DL+ + I  + + SE   
Sbjct: 189 IEDIAKLALGKFGKDIF-YDESRNLELA-EFGKDEVLKIIKKDLQDVGIFIESWASEKSL 246

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      +   I  LA  G +YE      K +TT             STM+GDD DR ++
Sbjct: 247 Y----DELEGTIKKLASSGQMYE------KDQTT----------YIASTMLGDDSDRVVI 286

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +SDG  TY A D+ Y   K+++G+ + I + G+DH GY+ R++A    +   ++++ V+L
Sbjct: 287 RSDGRPTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINFLGYDESRLEVIL 346

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L ++G P KMSKRAG  + +  ++ E+GSD++RF+ + + N+  L+FD  ++K++
Sbjct: 347 MQMVSLLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKANTSSLEFDIDELKKE 406

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAE 504
              NP+FY+ YA+AR   +F +A  +         P +V+  + S  D S   L+     
Sbjct: 407 DSSNPIFYINYAHARVNQVFAKASKL---------PNDVVGADLSNLDESGKNLLFEALI 457

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            P V+E+A  ++  +K+  YL  L++ FH  ++   EN   R V + N       L+L  
Sbjct: 458 LPEVLEDAVTSRSLHKIPEYLKSLSASFHKFYN---EN---RVVGSKNEDEL---LKLFS 508

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I   LN+IG+++ ++M
Sbjct: 509 VVALSIKVALNLIGIKAKDKM 529


>gi|89899583|ref|YP_522054.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|109895026|sp|Q220N0|SYR_RHOFD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89344320|gb|ABD68523.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 565

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 188/575 (32%), Positives = 291/575 (50%), Gaps = 55/575 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA----RIKIDPDVDSVFIAGK 86
           + V E P+  AHG L+T AAM L++PL L+P  +AE + A    R   +  V+++ IAG 
Sbjct: 26  KAVFESPKVAAHGDLATTAAMQLAKPLKLNPRQLAENLRAELLVRAPFERWVEAIDIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ L P   ++ +  ++  G ++G    G G ++ +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFINIKLKPEAKQQTVREVLSQGQQFGSQ-PGTGKRMLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYP 202
           GD + +L    G+ V RE+Y NDAG QI TLA S   R  +     D + P G     Y 
Sbjct: 145 GDAICNLYQTQGWAVYREFYYNDAGVQIGTLASSTQLR-ARGFKPGDPEWPSGENAAAYN 203

Query: 203 GVYLKHVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHD 257
           G Y+  +  +   K +  S+   F     +  + D  + A+  +  +   DLKA  +  D
Sbjct: 204 GDYIADIAADYLAKKTVHSDDRAFTASGDVEALDDIRLFAVAYLRHEQDLDLKAFAVHFD 263

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      + D++  L   G  YE                    L  +ST  G
Sbjct: 264 NYYLESSLYLS--GKVDDVVKRLHDAGKTYE----------------HDGALWLKSTEYG 305

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375
           DD DR + K DGSYTYF  D+AY   K+ERGF+ ++ + G+DH G + R+ A   AA V 
Sbjct: 306 DDKDRVMRKGDGSYTYFVPDVAYHISKWERGFEKVVNIQGTDHHGTIARVRAGLQAANVG 365

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             K   + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK     
Sbjct: 366 IPKGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEY 425

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIF-----RQAKDIFPDLDFDLFPRNVIPQESE 490
            FD      ++ +NPV+YVQYA+AR  S+      ++  D+      DL P    PQ   
Sbjct: 426 TFDVDLAVAKNNDNPVYYVQYAHARICSVLAAWREKEGGDVASLGQADLSPLQS-PQALA 484

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
                 +       YP ++  A     P+ + FYL +LA+ +H ++   R       +  
Sbjct: 485 LLLLLAK-------YPEMLTAAAAGFAPHDVTFYLRELAACYHSYYDAER-------ILV 530

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +   RL LV A A ++++GL ++GV +P +M
Sbjct: 531 DDDLIKRARLALVAATAQVLHNGLAVLGVSAPQKM 565


>gi|317179286|dbj|BAJ57074.1| arginyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 541

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 164/514 (31%), Positives = 266/514 (51%), Gaps = 36/514 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFI 89
           VIE P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+I
Sbjct: 18  VIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYI 77

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N  LS  +L +     +     +G      +  K+ +EFVSANPTGP+H+GH R AV GD
Sbjct: 78  NFTLSLDFLERSTQKALELKERFGSQAKSERSQKIFLEFVSANPTGPLHIGHARGAVFGD 137

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +LA +  F G+EV REYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  
Sbjct: 138 SLAKIARFLGHEVLREYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIE 197

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + K+  +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  + 
Sbjct: 198 IAKQANNDLEPSLFKENEETIIEVLSSYAKDLMLLEIKDNLDALGIHFDSYASEREVFKH 257

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             +    + + L +   +YE                   ++  +S++  D+ DR L+K D
Sbjct: 258 KDA----VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKED 297

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++
Sbjct: 298 KSYTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQM 357

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   
Sbjct: 358 VRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSS 417

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYP 506
           NP++Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P
Sbjct: 418 NPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLP 467

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           ++IE++       K+  Y   LAS FH  ++ G+
Sbjct: 468 KIIESSFEEYGLQKMCEYAKTLASEFHRFYNAGK 501


>gi|157364585|ref|YP_001471352.1| arginyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157315189|gb|ABV34288.1| arginyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 547

 Score =  283 bits (724), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 183/549 (33%), Positives = 287/549 (52%), Gaps = 44/549 (8%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G  +TNAA++ SR     P+ +AE +   +K     +SV +A  GF+N  +  S L KI+
Sbjct: 37  GDFATNAALVGSRYAKKPPMQLAESLKDILKQSELFESVQVAKPGFLNFVVRKSTLIKII 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +IV    +Y     G+  K+  E+ SANPTGP  VGH R  V+GD L+++    GY+V 
Sbjct: 97  ETIVEKD-DYPVEKSGQ-EKIQFEYGSANPTGPFTVGHGRQIVIGDILSNVFKALGYDVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           RE YINDAG QI  LA S++ RY Q L   + D+PE  Y G YL  + K+L ++   +  
Sbjct: 155 REMYINDAGRQIRLLAKSLWVRYNQVLGVEEIDIPEDGYHGEYLIEIAKKLVEEVEEKFK 214

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                +     + Y+V +++  ++ DL+ LN   DI+ SE      D   + ++++ L +
Sbjct: 215 MKWNNEIEGFFQKYAVDSILADMKSDLRLLNCSFDIYFSEKSLI--DDGTVDEVLEILEK 272

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             YVY                  RK   L F+ +   D+ D+ L++ DG++TYF  D+AY
Sbjct: 273 NSYVY------------------RKDGALWFKVSEFVDEEDKVLIRKDGTFTYFLTDIAY 314

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              K++RGF  +  + GSDH G+V R++A   A+  +   +NV+L + V L R    ++M
Sbjct: 315 HYKKHKRGFSKVYDIWGSDHHGHVPRMKAAMRALGVEDGFLNVILHQFVTLKRGDEIVRM 374

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           S R+G+F+TL+ +V+E G+D+ R+       +  + FD    K+QS +NPV+YVQYA+AR
Sbjct: 375 STRSGNFVTLKELVEEAGADATRYFFAMIDPNTHMVFDLNLAKQQSSDNPVYYVQYAHAR 434

Query: 461 CRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
             S+F QAK          D DL            D  E  LI+ +  +   +++A    
Sbjct: 435 ICSLFEQAKAKSVSFEKGKDLDLLN----------DKVETDLILRIDGFEDALKDAARTL 484

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P KL  YL  LA  FH  ++      +   V   N KL+  RL L +A   ++  GL++
Sbjct: 485 SPNKLTQYLEQLAYDFHSFYT------KCLIVDPKNMKLSNARLNLSYAAKLVLKKGLSL 538

Query: 577 IGVESPNEM 585
           +GV +P +M
Sbjct: 539 LGVNAPEKM 547


>gi|15611371|ref|NP_223022.1| arginyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7674359|sp|Q9ZMB9|SYR_HELPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|4154833|gb|AAD05887.1| ARGINYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 541

 Score =  283 bits (723), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 289/564 (51%), Gaps = 49/564 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87
            ++IE P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG
Sbjct: 16  EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKIGSHEKTQGFFDRVVACKG 75

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN  LS  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+GH R AV 
Sbjct: 76  YINFTLSLDFLERFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVF 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+LA +  F G+EV  EYY+ND G+QI  L +SV+  Y++ +       PE +Y G Y+
Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGVSVWLAYKEHVLKESVTYPEVFYKGEYI 195

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             + K+  +     L    EE  + ++ DY+   M+  I+ +L AL+I  D + SE +  
Sbjct: 196 IEIAKKAHNDLEPSLFKENEETIIEVLSDYAKDLMLLEIKGNLDALDIHFDSYASEKEVF 255

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   +    + D L +   +YE       SKT             +S++  D+ DR L+K
Sbjct: 256 KHKDA----VFDRLEKANALYE-----KDSKT-----------WLKSSLYQDESDRVLIK 295

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +    +++ VLL 
Sbjct: 296 EDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSSKLEVLLA 355

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q 
Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504
             NP++Y+ YA +R  ++  ++           F +  I Q      +  E  L+     
Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKYLLFSALS 465

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562
            P+ +E++       K+  Y   LAS FH  ++ G+  + P+ + +           L++
Sbjct: 466 LPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKI 514

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
              V+  + +   ++G+E   ++S
Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|17545006|ref|NP_518408.1| arginyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|39932229|sp|Q8Y2P8|SYR_RALSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17427296|emb|CAD13815.1| probable arginyl-trna synthetase (arginine--trna ligase) (argrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 600

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 199/601 (33%), Positives = 298/601 (49%), Gaps = 77/601 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           IV+ERP+  AHG ++ N A+ L++PLG +P  +A  I   I+ D      V +V IAG G
Sbjct: 30  IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LSP+    +L+++   G  YG   +  G  V +EFVSANPTGP+HVGH R A +G
Sbjct: 90  FINLRLSPTARTDVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+ + G++V RE+Y NDAG QI+ LA+SV  R  +     D+  PE  Y G Y+ 
Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGFKPGDTGWPEAAYNGDYIA 208

Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +      GK +       +    + + +  ++ ++V  +      DL+A  ++ D +  
Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENIEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      ++  +D L   G  YE                    L  R+T  GDD D
Sbjct: 269 ESSLYA--DGKVQQTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 310

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KSDGSYTYF  D+AY   K+ RGF  +I V GSDH G + R+ A      +   K 
Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDLGIPKG 370

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417
             + +L ++V + +DG  +K+SKRAG ++T+R +             VD +         
Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGAP 430

Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465
                   G D+VRF +L RK      FD     +QS ENPV+YVQYA+AR  S+F    
Sbjct: 431 NWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490

Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D       DL          E     + L+  +A +P ++ +A     P+ +AFY
Sbjct: 491 AREGGDAASLAGADL----AAVAGPEASPQAVALVQRIAAFPDMLADAARELAPHAVAFY 546

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L DLA  FH  ++  R       V  ++  +   RL L+ A   ++ +GL +IGV +P +
Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|193214239|ref|YP_001995438.1| arginyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087716|gb|ACF12991.1| arginyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 552

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 191/576 (33%), Positives = 300/576 (52%), Gaps = 49/576 (8%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           ++ VE      I IE+P D   G  STN AM L+R L  +P  IA  I++ + +   VD 
Sbjct: 15  ELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAADIISNLSLGESVDK 74

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           + +AG GFIN Y S  Y+   +  I+  G ++GR+ +GKG    +E+VSANPTGP+ VG 
Sbjct: 75  IDVAGAGFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVEYVSANPTGPLTVGR 134

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  V+GD +A+++   GY+VTREYY N+AG Q+  LA SV +RY + L     D PE +
Sbjct: 135 GRGGVLGDCIANMLEAQGYDVTREYYFNNAGRQMRILAGSVRFRYLE-LCGEQVDFPEDH 193

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + +++ D+  + L     E+ L   K+++   + + I++ L  L I+HD F 
Sbjct: 194 YQGGYIGDIAQKIYDEKGTSLAG---EEDLSFFKEFAEAEIFESIKNTLGRLGIKHDSFF 250

Query: 261 SEDD-FHRGDPSPIR--DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +E+  + +G+    R  ++++ LA +GY+                  +     F +T  G
Sbjct: 251 NENTLYEKGENGKSRNDEVVERLAEKGYI----------------KHEDGATWFLTTKFG 294

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
            + D+ L+KS G  +Y   D+AY   K+ER F  M+ V G+DH   Y   L A+     E
Sbjct: 295 LEKDKVLVKSTGEPSYRLPDIAYHITKFERDFSLMVNVFGADHIDEYPDVLRALEVLGYE 354

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K+ ++ V + + V    +G  +KMS R G+   L  ++D+VG+D+ RF  + R     L+
Sbjct: 355 KE-RVQVAINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATRFFFIIRNKESHLN 413

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD---- 492
           FD    K+QS +NPVFY+QYA+AR  S+ R A +   + DF+       P  SE+D    
Sbjct: 414 FDVDLAKKQSTDNPVFYLQYAHARICSLIRVAGE---ETDFE-------PSASEYDLLDA 463

Query: 493 ---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                ELQL   L EY   +E    A EP KL  Y+  +A  FH  +   R       + 
Sbjct: 464 LTANEELQLAKILLEYGTALEVCVNALEPQKLIGYMNRVAEAFHKFYQECR-------IV 516

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    +   RL L  A   ++ +G  ++G+ +P +M
Sbjct: 517 SEEESVRKSRLYLCLATRQVLQNGFKVLGISAPEKM 552


>gi|19552403|ref|NP_600405.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390067|ref|YP_225469.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|1351171|sp|P35868|SYR_CORGL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21323946|dbj|BAB98572.1| Arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325403|emb|CAF19883.1| ARGINYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 550

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 188/583 (32%), Positives = 307/583 (52%), Gaps = 38/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+    +++  +L +++V+ERPR+  HG  +TN A+ +++ +G +P  
Sbjct: 4   ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +  D  +DS  IAG GF+N+ L+ +   +I++ I+  G  +G +       V
Sbjct: 64  LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K + + + +K+  E L         + +   V+ M +
Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKHP-EALALEPAATQELFRAEGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      RST  GDD DR ++KSDG   Y A D+AY   K+ RG +  IY++G+DH GY
Sbjct: 280 -NEGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+  K   + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A+ +   +   DL   
Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLGVTEEGADL--- 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++  + E D     LI  L E+P V++ A   +EP+++A Y  +LA  FH  +      
Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHIL 510

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+   V  +   +   RL L  A    + + L+++GV +P +M
Sbjct: 511 PK---VDEDTAPIHTARLALAAATRQTLANALHLVGVSAPEKM 550


>gi|313139480|ref|ZP_07801673.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313131990|gb|EFR49607.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 613

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 185/597 (30%), Positives = 306/597 (51%), Gaps = 76/597 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D A G  ++NAAM L++  G+ P  +AEL   R+     + +V +AG GFIN
Sbjct: 51  KFAVMRPKDRARGDWASNAAMQLAKKAGMKPRDLAELFAERLTAADGISTVEVAGPGFIN 110

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++  ++  G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 111 ITLDSASAAAVVDKVLADGAGYGKNAHLGGKTLNLEFVSANPTGPIHIGGTRWASVGDSM 170

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 171 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGKYINEIA 224

Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
             +   A+    ++L+ P      ++   P+ +  S Q           M   I+  +K 
Sbjct: 225 DRVIAEAEADGVDVLSLPRVDGGLDKDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKE 284

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             ++ D++  E++ ++     +   I+ L  +G ++E      K   T           F
Sbjct: 285 FRVRFDVWFHENNLYK--DGEVDRAIEELRSRGDIFE------KDGAT----------WF 326

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KS+G + YFAAD+AY+  K  R  D     IY++G+DH GY+ R+ 
Sbjct: 327 ESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLGADHHGYIGRMM 386

Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA   E    + +L+ +LV + ++G P++MSKRAG+ +T+  +V+ VG D+ R+ + 
Sbjct: 387 AMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEAVGVDAARYSLA 446

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A          D  L     
Sbjct: 447 RTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTEGADLSLL---- 502

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540
              ++E D    +++  LA++P  +  A   + P+K+A YL DLA  +H  ++  R    
Sbjct: 503 ---DTEADG---EVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVPM 556

Query: 541 --ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P  R   A    L +           RL+L  AV ++I SGL+++GV +P++M
Sbjct: 557 ALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM 613


>gi|224419223|ref|ZP_03657229.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253826941|ref|ZP_04869826.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142726|ref|ZP_07804919.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510347|gb|EES89006.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131757|gb|EFR49374.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 521

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 169/565 (29%), Positives = 295/565 (52%), Gaps = 54/565 (9%)

Query: 26  KKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           KKI+D       V+E+PRD   GH +       ++     P  IA+    +++  P++ S
Sbjct: 6   KKIVDETLGITSVLEQPRDKKFGHFAL-PTFSFAKSFKKSPQDIAQDFAKKLESLPEISS 64

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           + + G G++N +LS  +L +     +     + +N    G K+ +E+VSANPTGP+H+GH
Sbjct: 65  LNVVG-GYVNFFLSDLFLEQCTQDFLKP---HQKN----GEKILLEYVSANPTGPLHIGH 116

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A++GD+L  +    GY +T EYYINDAG+QI  L  S+++  +   +++  DLPEG 
Sbjct: 117 ARGAILGDSLCRIGRHLGYSITTEYYINDAGSQIENLGKSIYYAGRHLFFDDSYDLPEGC 176

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  D +  E   F  EK++  +  +    M++ I+ +L    I  D F+
Sbjct: 177 YKGEYILDLAKEAKDCFGIEC--FENEKFIEKLSLFGKDKMLEEIKSNLAEAGIVFDNFV 234

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE + ++     ++    +L     +Y+                   ++  +ST  GD+ 
Sbjct: 235 SEKELYKQWDGTLK----SLESHNGIYK----------------QEGKIWIKSTEFGDEK 274

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           +R +++ +G  TY A D+ Y K K+ER FD  I + G+DH GY++R++A    +     Q
Sbjct: 275 NRVVVRENGEPTYLAGDIIYHKNKFERKFDRYINIWGADHHGYIQRVKAAIEFLGYDSNQ 334

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + +LL ++V L + G   KMSKRAG+FI ++ ++++VGSD++R + L ++    L+FD  
Sbjct: 335 LEILLSQMVALLKGGESYKMSKRAGNFILMKDIIEDVGSDALRLIFLSKRADTHLEFDIE 394

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +K+Q   NPV+Y+ YA+AR  ++F ++      L  D          S    S   L+V
Sbjct: 395 DLKKQDSSNPVYYINYAHARIHTLFSKSNYTLETLQKDF---------SNLSESLRDLLV 445

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
                 + +E++ I + P K+  YL  L+S FH  ++        + +   N K  +  L
Sbjct: 446 LALNLSKTLEDSFIQRNPQKVVEYLRTLSSEFHRFYNEE------KILNTPNEKTILSVL 499

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            +   VA  +N+GL+++GV++   M
Sbjct: 500 SM---VAQSLNAGLDLLGVKAKKSM 521


>gi|307728283|ref|YP_003905507.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307582818|gb|ADN56216.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 600

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 190/591 (32%), Positives = 302/591 (51%), Gaps = 64/591 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I +ERP+  AHG ++ N AM L++PL  +P  +A+ IV  +   P     ++S  +AG G
Sbjct: 37  IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDTLLAQPQAQGLIESAEVAGPG 96

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L+ +  + ++++++     YGR+    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 97  FINLRLAAAAKQAVVAAVLAEKDAYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L++++A  G++V RE+Y NDAG QI TLALS   R  + L   D+  P   Y G Y+ 
Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQAR-ARGLAPGDAGWPASAYNGEYIA 215

Query: 208 HVGKELADKYS------SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K+  +  +        +    + + L  ++ ++V  + +    DL+A  ++ D +  
Sbjct: 216 DIAKDYLNGVTVCASDGEPVTGARDVENLDAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   ++ L   G  YE                    L  R+T  GDD D
Sbjct: 276 ESSLYT--EGRVEKTVEALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379
           R + KSDG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A      +   K 
Sbjct: 318 RVMRKSDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419
             + +L ++V + R+G  +K+SKRAG ++T+R +++  G                     
Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437

Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDF 477
            D+VRF ++ RK      FD     +Q+ ENPV YVQYA+AR  S+  + K  +  D   
Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKSRYGADYGA 497

Query: 478 D---LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           D   L   ++ P  SE     + L+  LAE+P ++++A     P+ +AFYL DLA  FH 
Sbjct: 498 DESALANVDLAPLSSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHS 554

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +     N +   V  ++      R+ L+ A   ++ +GL +IGV +P +M
Sbjct: 555 FY-----NDKAERVLVDDAAERNARVALLAATRQVLANGLAVIGVSAPVKM 600


>gi|313681372|ref|YP_004059110.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154232|gb|ADR32910.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 526

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 168/503 (33%), Positives = 279/503 (55%), Gaps = 37/503 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +++E+P+D + GH +T  A  L++ L   P+ IAE I      D  + S   + +G+IN 
Sbjct: 17  VILEKPKDRSFGHFATPIAFSLAKELRKSPMLIAEEIAGSFA-DESMFSAVESVQGYINF 75

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS ++L +  S  +  G E+G +   KGT + +EFVSANPTGP+H+GH R AV GDT+ 
Sbjct: 76  RLSEAFLDEYASWALSHGDEFGSS-DKKGT-ILLEFVSANPTGPLHIGHARGAVYGDTML 133

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L    GY++T EYY+NDAG QI+ L +S+    + +L     + PE YY G YL  + +
Sbjct: 134 RLGRHLGYDITAEYYVNDAGNQIDLLGVSLQLEGRSSLLGESVEWPEKYYRGEYLSDLAR 193

Query: 212 ELADKYSSELL-NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           E+ + +  E L +   +K L +   ++   ++ +I DDL A+N+  D F+ E   +    
Sbjct: 194 EVVELFGEEALRDESRQKELAL---WAKDKILALIVDDLAAINVHFDTFVGEASLY---- 246

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S    ++  +    YV EG                  +   RS+ +GDD DR +++ DG 
Sbjct: 247 SEWDRVMAKMGEGVYVNEG------------------KTFIRSSDLGDDHDRVVVREDGR 288

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY A D+ Y   K+ERG+D+ I + G+DH GY+ R++A    +    +++ VLL ++V 
Sbjct: 289 PTYLAGDIIYHNQKFERGYDDYINIWGADHHGYIARVKAAITFLGYDSSKLEVLLSQMVS 348

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG P KMSKRAG  I +  VV+E+G++++RFM   +K    L+FD  ++K Q   NP
Sbjct: 349 LLKDGEPFKMSKRAGTVILMSDVVEEIGAEALRFMFASKKCDTALEFDIEELKRQDSSNP 408

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           ++Y+QYA+AR +++  +++    ++D ++   ++    S+ D     L+      P +I+
Sbjct: 409 IYYIQYAHARIQTLISKSE---KNMD-EIMGSHLYGLSSDADG----LLFEALLLPEIID 460

Query: 511 NATIAQEPYKLAFYLYDLASVFH 533
           +A  +++  KL  YL  LA   H
Sbjct: 461 DAFESRQAQKLPDYLKVLAGRLH 483


>gi|261885571|ref|ZP_06009610.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 531

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 173/561 (30%), Positives = 299/561 (53%), Gaps = 44/561 (7%)

Query: 27  KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++L R  ++E+P+D    H +T  A  L++     P  IA  +  + +     D   I  
Sbjct: 11  RVLGRDFILEKPKDKNLAHYATPFAFSLAKEFKKSPAIIASQLALKFENHELFDVFSI-- 68

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            G++N  L   +L  + ++ +     +G         + IE++SANPTGP+H+GH R AV
Sbjct: 69  NGYLNFKLKGEFLNSLANNALSLAESFGSKKPQSQKDIFIEYISANPTGPLHIGHVRGAV 128

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GDTLA +  + G +V  EYYINDAG QI+ L +S+    ++AL+N +   P+ YY G Y
Sbjct: 129 YGDTLARVARYIGLDVFTEYYINDAGNQIDLLGISISLFAREALFNENVQYPDKYYRGEY 188

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           ++ + K    K+  ++  + E + L +  ++    ++KII+ DL+ + I  + + SE   
Sbjct: 189 IEDIAKLALGKFGKDIF-YDESRNLELA-EFGKDEVLKIIKKDLQDVGIFIESWASEKSL 246

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      +   I  LA  G +YE      K +TT             STM+GDD DR ++
Sbjct: 247 Y----DELEGTIKKLASSGQMYE------KDQTT----------YIASTMLGDDSDRVVI 286

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +SDG  TY A D+ Y   K+++G+ + I + G+DH GY+ R++A    +   ++++ V+L
Sbjct: 287 RSDGRPTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINFLGYDESRLEVIL 346

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L ++G P KMSKRAG  + +  ++ E+GSD++RF+ + + N+  L+FD  ++K++
Sbjct: 347 MQMVSLLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKANTSSLEFDIDELKKE 406

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAE 504
              NP+FY+ YA+AR   +F +A  +         P +V+  + S  D S   L+     
Sbjct: 407 DSSNPIFYINYAHARVNQVFAKASKL---------PNDVVGADLSNLDESGKNLLFEALI 457

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            P V+E+A  ++  +K+  YL  L++ FH  ++   EN   R V + N       L+L  
Sbjct: 458 LPEVLEDAVTSRSLHKIPEYLKSLSASFHKFYN---EN---RVVGSKNED---ELLKLFS 508

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I   LN+IG+ + ++M
Sbjct: 509 VVALSIKVALNLIGIIAKDKM 529


>gi|317013765|gb|ADU81201.1| arginyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 541

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 166/564 (29%), Positives = 289/564 (51%), Gaps = 49/564 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87
            ++IE P+D  HGH +T  A  L++     PL IAE +  +I     +   F   +A KG
Sbjct: 16  EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISSHKKIQGFFDRVVACKG 75

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN  LS  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+GH R AV 
Sbjct: 76  YINFTLSLDFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVF 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+LA +  F G+EV  EYY+ND G+QI  L +SV+  Y++ +       PE +Y G Y+
Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGISVWLAYKEHVLKESVTYPEVFYKGEYI 195

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             + K+ ++     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  
Sbjct: 196 IEIAKKASNDLEPSLFKGNEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIF 255

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   +    + + L +   +YE                   ++  +S++  D+ DR L+K
Sbjct: 256 KCKDA----VFERLKKANALYE----------------KDSKIWLKSSLYQDESDRVLIK 295

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +    +++ VLL 
Sbjct: 296 EDKSYTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSSKLEVLLA 355

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q 
Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504
             NP++Y+ YA +R  ++  ++           F +  I Q      +  E  L+     
Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKYLLFSALS 465

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562
            P+ +E++       K+  Y   LAS FH  ++ G+  + P+ + +           L++
Sbjct: 466 LPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKI 514

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
              V+  + +   ++G+E   ++S
Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|317008966|gb|ADU79546.1| arginyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 541

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 287/564 (50%), Gaps = 49/564 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87
            ++IE P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG
Sbjct: 16  EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKG 75

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN  LS  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV 
Sbjct: 76  YINFTLSLDFLERSTQKALELKEQFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVF 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+
Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYI 195

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             + K+  +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  
Sbjct: 196 IEIAKKADNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVF 255

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   +    + + L +   +YE                   ++  +S++  D+ DR L+K
Sbjct: 256 KHKDA----VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIK 295

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL 
Sbjct: 296 EDKSYTYLAGDIVYHDEKFKQNYTQYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLA 355

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++VRL +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q 
Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQD 415

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504
             NP++Y+ YA +R  ++  ++           F +  I Q   S  +  E  L+     
Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLSNLNAEEKYLLFSALS 465

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562
            P+ IE++       K+  Y   LAS FH  ++ G+    P+ + +           L++
Sbjct: 466 LPKAIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKI 514

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
              V+  +++   ++G+E   ++S
Sbjct: 515 CLMVSLSLSNAFKLLGIEIKTKIS 538


>gi|224282334|ref|ZP_03645656.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 598

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 185/597 (30%), Positives = 306/597 (51%), Gaps = 76/597 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +  + RP+D A G  ++NAAM L++  G+ P  +AEL   R+     + +V +AG GFIN
Sbjct: 36  KFAVMRPKDRARGDWASNAAMQLAKKAGMKPRDLAELFAERLTAADGISTVEVAGPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +    ++  ++  G  YG+N    G  +N+EFVSANPTGP+H+G  R A VGD++
Sbjct: 96  ITLDSASAAAVVDKVLADGAGYGKNAHLGGKTLNLEFVSANPTGPIHIGGTRWASVGDSM 155

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++  +G +V REYY ND G QIN  A S+      A +  ++  P   Y G Y+  + 
Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGKYINEIA 209

Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251
             +   A+    ++L+ P      ++   P+ +  S Q           M   I+  +K 
Sbjct: 210 DRVIAEAEADGVDVLSLPRVDGGLDKDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKE 269

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             ++ D++  E++ ++     +   I+ L  +G ++E      K   T           F
Sbjct: 270 FRVRFDVWFHENNLYK--DGEVDRAIEELRSRGDIFE------KDGAT----------WF 311

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368
            ST  GDD DR ++KS+G + YFAAD+AY+  K  R  D     IY++G+DH GY+ R+ 
Sbjct: 312 ESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLGADHHGYIGRMM 371

Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A+ AA   E    + +L+ +LV + ++G P++MSKRAG+ +T+  +V+ VG D+ R+ + 
Sbjct: 372 AMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEAVGVDAARYSLA 431

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484
               +  +D D   +   S ENPV+YVQYA+AR  ++ R A          D  L     
Sbjct: 432 RTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTEGADLSLL---- 487

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540
              ++E D    +++  LA++P  +  A   + P+K+A YL DLA  +H  ++  R    
Sbjct: 488 ---DTEADG---EVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVPM 541

Query: 541 --ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P  R   A    L +           RL+L  AV ++I SGL+++GV +P++M
Sbjct: 542 ALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM 598


>gi|187479831|ref|YP_787856.1| arginyl-tRNA synthetase [Bordetella avium 197N]
 gi|109894974|sp|Q2KTN9|SYR_BORA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115424418|emb|CAJ50971.1| arginyl-tRNA synthetase [Bordetella avium 197N]
          Length = 561

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 187/568 (32%), Positives = 295/568 (51%), Gaps = 48/568 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I++ERP+  AHG ++TN AM L++P   +P  +A+ IV  +  DP     VDS  IAG G
Sbjct: 28  ILLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQGIVDALLADPQARAIVDSAEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL  +    + +++++   G  +GR    +  KV +EFVSANPTGP+HVGH R A +G
Sbjct: 88  FINLRFTAQARQAVVAAVSAQGAAFGRA-ARRDEKVLVEFVSANPTGPLHVGHARQAALG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +  L   SG++VTRE+Y NDAG QI  LA+SV  R  + +  +  + P   Y G Y+ 
Sbjct: 147 DAICRLFDASGWDVTREFYYNDAGNQIQNLAISVQAR-ARGIGPDAPEWPADGYKGDYIA 205

Query: 208 HVGKELADKYSSELLNFPEEKW------LPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + ++   + S +  +    +       L  ++ ++V  + +    DL+A  ++ D F  
Sbjct: 206 DIARDYLAQASVQAADGEPVQASGNIDDLEDIRAFAVAYLRREQDLDLQAFGLKFDNFFL 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDD 319
           E   +      +   ++ L  +G+ YE                    L  R+T +  GDD
Sbjct: 266 ESSLY--TSGRVERTVETLIAKGHTYE----------------QDGALWLRTTELGTGDD 307

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-- 377
            DR + KS+G YTYF  D+AY   K+ERGF + I + GSDH G V R+ A    + E   
Sbjct: 308 KDRVMRKSEGGYTYFVPDVAYHLAKWERGFHHAINIQGSDHHGTVARVRAGLQGLEEGIP 367

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K     +L ++V++ R G  +K+SKRAG ++T+R +++ VG D+VR+ ++ R+      F
Sbjct: 368 KEFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIEWVGRDAVRYFLIQRRADTEFVF 427

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D      +S ENPV+Y+QYA+AR  S+   +      +      R   P       SE  
Sbjct: 428 DIDLALSKSDENPVYYIQYAHARICSMIASSGLDDATIAAADAARLTAP-------SEFA 480

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LAE+P V++ A     P+ +AF+L D AS FHG ++  R       V  ++  L  
Sbjct: 481 LMQRLAEFPNVVKLAAQELAPHHIAFWLRDCASDFHGWYNAER-------VLVDDEGLKQ 533

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L      ++ +GL ++GV +   M
Sbjct: 534 ARLRLAATTRQVLANGLALLGVTALERM 561


>gi|433534|emb|CAA79710.1| arginyl-tRNA synthetase [Corynebacterium glutamicum]
          Length = 550

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 187/583 (32%), Positives = 305/583 (52%), Gaps = 38/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+    +++  +L +++V+ERPR+  HG  +TN A+ +++ +G +P  
Sbjct: 4   ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +  D  +DS  IAG GF+N+ L+ +   +I++ I+  G  +G +       V
Sbjct: 64  LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K + + + +K+  E L         + +   V+ M +
Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKHP-EALALEPAATQELFRAEGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      RST  GDD DR ++KSDG   Y A D+AY   K+ RG +  IY++G+DH GY
Sbjct: 280 -NEGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+  K   + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYKPEDVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A+ +   +   DL   
Sbjct: 399 YSLIRSSVDSSLDMDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLGVTEEGADL--- 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++  + E D     LI  L E+P V++ A   +EP+++A Y  +LA  FH  +      
Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHIL 510

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+      +   +   RL L  A    + + L ++GV +P +M
Sbjct: 511 PK---ADEDTAPIHTARLALAAATRQTLANALRLVGVSAPEKM 550


>gi|152991237|ref|YP_001356959.1| arginyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166232815|sp|A6Q543|SYR_NITSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151423098|dbj|BAF70602.1| arginyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 527

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 180/555 (32%), Positives = 299/555 (53%), Gaps = 45/555 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I++E+PRD   GH +T  A  L++ L   P+ IA+ +    +     + V    KG++N 
Sbjct: 17  IILEKPRDRQFGHYATPIAFSLAKELRRSPMQIADELAKSFESSSIFEKVEPI-KGYVNF 75

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS S+L +  +  + +  E+G++   +G  + +EFVSANPTGP+H+GH R AV+G+ L+
Sbjct: 76  KLSESFLDEYATWALKNESEFGKD--EQGETILLEFVSANPTGPLHIGHARGAVLGEALS 133

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L    G E+ +EYYINDAG QI  L LS++   ++ L   +   P+ YY G Y+K + K
Sbjct: 134 RLGKHLGNEIVKEYYINDAGNQIYLLGLSIYLAAKEEL-GQEVQWPQEYYRGDYIKDLAK 192

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  +++  E   F +E  +  + ++  + MM++I  +L A++I+ D F+SE   +     
Sbjct: 193 EAIEEFGKE--AFSDESLIDKLSEWGKEKMMELIVSNLAAVDIKFDHFVSEKALYE---- 246

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
              ++   L     VYE                   ++  +S+  GD+ DR +++ DG  
Sbjct: 247 KWDEVFAILKEHDAVYE----------------KDSKVWLKSSEYGDEKDRVVVREDGRP 290

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY A D+ Y   K++RGFD  I + G+DH GY+ R++A    +     ++ VLL ++V L
Sbjct: 291 TYLAGDIIYHYDKFKRGFDRYINIWGADHHGYIARVKAAIKFLGFDPDKLEVLLAQMVSL 350

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            + G P KMSKRAG+FI +  VV+E+G+D+++FM L +K    L+FD   +K++   NPV
Sbjct: 351 LKGGEPYKMSKRAGNFILMSEVVEEIGADALKFMFLSKKADTHLEFDVDMLKKEDASNPV 410

Query: 452 FYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +Y+ YA+AR  S+  +A K     +D  L   N   ++  F+     LI+     P +IE
Sbjct: 411 YYINYAHARINSVLEKAGKSAGEVIDTPLKDLNEDAKDLLFEA----LIL-----PEIIE 461

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   +E  +L  YL  LA+ FH  ++  +       V  +  +   ++L LV  VA  I
Sbjct: 462 DAFAKRELQRLTDYLKALAAQFHSFYNKHK-------VIGSEYEDRYLKLFLV--VALSI 512

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+E+   M
Sbjct: 513 RVGLRLLGIEAKKRM 527


>gi|78188054|ref|YP_378392.1| arginyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|109894980|sp|Q3ANY2|SYR_CHLCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78170253|gb|ABB27349.1| arginyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 552

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 299/562 (53%), Gaps = 41/562 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I +E+P D   G  STN AM+ ++  G  P  +A+ I+  +   PD V  + IAG GFIN
Sbjct: 24  IQLEQPADKKFGDFSTNIAMLAAKECGKKPRDLAQEIINHLAFPPDTVAKIEIAGAGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+P ++ + +  ++  G ++G++  G G K  +E+VSANPTGP+ +G  R  VVGD +
Sbjct: 84  FYLTPRFIMRSVEQVLRDGEKFGQSTEGNGKKAIVEYVSANPTGPLTIGRGRGGVVGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+A  GYEVTREYY NDAG Q+  L  SV +RY + L  N  + PE +Y G Y++ + 
Sbjct: 144 ANLLATQGYEVTREYYFNDAGRQMQILGASVRFRYLE-LCGNTIEFPEDHYQGDYIRDIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD- 269
             L +++ + L    + + L   K  + + + K I+  L+ LNI+HD F +E   +  + 
Sbjct: 203 ATLYEQHGNAL---EKSEELEPFKKAAEELIFKSIKATLERLNIRHDSFFNEHKLYLANN 259

Query: 270 --PSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
             PS    +I +L+   ++  Y+G                     F +T +G + D+ L+
Sbjct: 260 NSPSANTAVIQSLSSSNFIDDYDG------------------ATWFLTTKLGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   K++RGFD M+ V G+DH   Y   LEA+   +     +++V 
Sbjct: 302 KSTGEPSYRLPDIAYHVNKFQRGFDLMVNVFGADHIDEYPDVLEAL-KILGYDTTKVHVA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    +G  +KMS R G+   L  ++ +VG+D+ R   + R     L+FD    K 
Sbjct: 361 INQFVTTTVNGQTVKMSTRKGNADLLDDLIADVGADATRLFFITRSKDSHLNFDVELAKR 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLA 503
           QSKENPVFY+QYA+AR  S+ R AK    ++ FD             D  +E+QL   L 
Sbjct: 421 QSKENPVFYLQYAHARICSLLRLAKQ---EVGFDADTYGFADVLQVLDGAAEVQLGFALL 477

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +P +I+++    EP K+  YL+ LA  FH  +   +E+P L+       ++   RL L 
Sbjct: 478 NFPAMIQSSLRLLEPQKMVEYLHALAEHFHRFY---QESPILK----AEPEVRTARLLLS 530

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +G  I+G+ +P  M
Sbjct: 531 VATRQVLRNGFTILGISAPEAM 552


>gi|145295319|ref|YP_001138140.1| arginyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166232781|sp|A4QDE1|SYR_CORGB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|140845239|dbj|BAF54238.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 550

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 187/583 (32%), Positives = 306/583 (52%), Gaps = 38/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+    +++  +L +++V+ERPR+  HG  +TN A+ +++ +G +P  
Sbjct: 4   ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +  D  +DS  IAG GF+N+ L+ +   +I++ I+  G  +G +       V
Sbjct: 64  LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K + + + +K+  E L         + +   V+ M +
Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKHP-EALALEPAATQELFRAEGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      RST  GDD DR ++KSDG   Y A D+AY   K+ RG +  IY++G+DH GY
Sbjct: 280 -NEGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+  K   + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A+ +   +   DL   
Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLGVTEEGADL--- 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++  + E D     LI  L E+P V++ A   +EP+++A Y  +LA  FH  +      
Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHIL 510

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+      +   +   RL L  A    + + L+++GV +P +M
Sbjct: 511 PK---ADEDTAPIHSARLALAAATRQTLANALHLVGVSAPEKM 550


>gi|319942151|ref|ZP_08016469.1| arginyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804361|gb|EFW01245.1| arginyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 586

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 181/537 (33%), Positives = 278/537 (51%), Gaps = 57/537 (10%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89
           +E+P+D  HG ++   AM L+R L  +P  IAE +VA +K D      +++V IAG GFI
Sbjct: 29  LEKPKDPTHGDVACTVAMQLARRLKQNPRAIAETLVAEMKADEAFATLLETVEIAGPGFI 88

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  ++ +    I+S ++  G ++GR+    G  V +E+VSANPTGP+H+GH R   +GD 
Sbjct: 89  NFRVAQNARAAIVSQVLQEGEKFGRSNEFAGKSVLLEYVSANPTGPLHLGHARQGALGDV 148

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA+L+   G++V+RE+Y NDAG QI  LA+SV  R +Q L     +LPE  Y G Y+  +
Sbjct: 149 LANLLDSQGWKVSREFYYNDAGVQIGNLAMSVQVRCRQ-LQGESLELPENAYHGEYIVSI 207

Query: 210 GKELADK-----YSSELLNFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            ++  DK     +  E +    +     +++ YSV  +     DDL AL ++ D F  E 
Sbjct: 208 ARDFLDKKPVIPHGGEPIESTGDYGDTDLIRRYSVAYLRNEQDDDLSALGVRFDNFFLES 267

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-------V 316
             +      ++  +  +   GY YE                    L  R+T        +
Sbjct: 268 SLYT--TGAVQKTVQAIIDAGYTYEA----------------DNALWLRTTAFEDLGNGL 309

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
            DD DR + KSDG+YTYF  D+AY   K+ RG+   + + G+DH G + R+ A   A S+
Sbjct: 310 RDDKDRVMKKSDGTYTYFVPDVAYHLNKFSRGYTKAVNIQGTDHHGTIARVRAGLQAASK 369

Query: 377 K------KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
                  K     +L +++ + + G  +KMSKR+G+++TLR +VD  G D+ RF ++ RK
Sbjct: 370 TLGVTIPKTFPEYILHKMLSVVKGGEVVKMSKRSGNYVTLRDLVDWAGRDAARFFLVSRK 429

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLD----FDLFPRN 483
                 FD    K+ S ENPV+Y+QYA+AR  S+F  A +     P+ +     DL P N
Sbjct: 430 ADAEFVFDVDLAKKNSDENPVYYLQYAHARICSVFTNALEQGYEIPNREALATMDLSPLN 489

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               E+        LI  +AEYP  +  A     P+ L +YL  LA+ FH  ++  R
Sbjct: 490 SKAAEA--------LIGAVAEYPNTLRLAARDHAPHILCYYLKGLAAAFHAFYNAER 538


>gi|37523848|ref|NP_927225.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932048|sp|Q7NDF6|SYR_GLOVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|35214854|dbj|BAC92220.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 601

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 191/580 (32%), Positives = 299/580 (51%), Gaps = 43/580 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V+E+P+   HG  +T  AM L++P  L PL IAE I + +    D   V +A  GFINL
Sbjct: 39  VVVEKPKVPEHGDYATPVAMSLAKPCRLAPLAIAEAIASYLA--SDEIGVEVAKPGFINL 96

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   ++   L +I+    +YGR +  +  ++ +EFVSANPTGP+H+GH R A +G +L 
Sbjct: 97  RLGHRFVAVELQNILELKGDYGRTVPQQPERILLEFVSANPTGPLHLGHGRWAALGSSLE 156

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+GY V  E+YINDAG Q+  L LS+  RY Q L     +LP+G Y G YLK + +
Sbjct: 157 RILQFAGYTVDSEFYINDAGNQMQLLGLSLKQRYLQVL-GEAVELPDGGYKGSYLKELAE 215

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L       L   P E W     +  +    KI    L+    + D + SE   H     
Sbjct: 216 QLVADKGDSLGGEPVE-WFSAYAEGRLLEQQKIT---LQQFRTEFDRWYSERSLHCA--G 269

Query: 272 PIRDIIDNLARQGYVYEGILP--------PPKSKTTQ------KCDMDRKQLLFRSTMVG 317
            I   + +L  +G +Y               +SK  Q      + D   + L F++   G
Sbjct: 270 AIEAALADLEARGMLYRAARSRQEQSGEITGRSKKVQAPAAFEEEDGGGEALFFKAADFG 329

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D++DR + ++DG+ TY AAD+AY   KY+RG+  +I + G+DH GYV R++AVA A+   
Sbjct: 330 DEMDRVVKRADGNTTYLAADIAYHWDKYQRGYGRLINIWGADHHGYVPRMKAVAQALGHP 389

Query: 378 KAQINVLLCELVRLYRDG------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
              + +L+ ++VRL++          ++MSKR G+ +++  +++EVG D+ R+ +L +  
Sbjct: 390 ADSLEILIGQMVRLFKTNPETGQKEEMRMSKRRGELVSVDDLIEEVGVDAGRWFLLSQSL 449

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQ 487
           +  ++FD    + +  +NPVFYVQY +ARC SI R+A +    I    +F L P   +  
Sbjct: 450 NTTVNFDLDLAQSEKFDNPVFYVQYNHARCCSILRKAPERGMPILERFEF-LKPDGGLWL 508

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           E+     E  L + L   P     A + + P +L  Y YDLAS     + H    P L  
Sbjct: 509 ET---PQERTLALRLLAAPDEYRFAAVDRTPQRLTQYAYDLASDVSQFYEHCPILPPL-- 563

Query: 548 VQANNRK--LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             A N +  L   RL LV A   ++ + L ++G+E    M
Sbjct: 564 --AENLEPALRYARLGLVVATRQVLATTLTLLGIEPRESM 601


>gi|317010599|gb|ADU84346.1| arginyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 541

 Score =  280 bits (716), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 166/564 (29%), Positives = 288/564 (51%), Gaps = 49/564 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87
            ++IE P+D  HGH +T  A  L++     PL IAE +  +I +       F   +A KG
Sbjct: 16  EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISMHAKTQGFFDSVVACKG 75

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN  LS  +L +     +    ++G  L  + + K+ +EFVSANPTGP+H+GH R AV 
Sbjct: 76  YINFTLSLDFLERFTQKALELKEKFGSKLPSENSQKIFLEFVSANPTGPLHIGHARGAVF 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+
Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYI 195

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             + ++  +     L    EE  + ++  Y+   M+  I+D+L +L I  D + SE +  
Sbjct: 196 IEIAQKARNDLEPSLFQENEETIIEVLSGYAKDLMLLEIKDNLDSLGIHFDSYASEKEVF 255

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   +    +   L +   +YE                   ++  +S++  D+ DR L+K
Sbjct: 256 KHKDA----VFKTLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIK 295

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D +YTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +    +++ VLL 
Sbjct: 296 EDKNYTYLAGDIVYHNEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSSKLEVLLA 355

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q 
Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504
             NP++Y+ YA +R  ++  ++           F +  I Q      +  E  L+     
Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKYLLFSALS 465

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562
            P++IE +       K+  Y   LAS FH  ++ G+  + P+ + +           L++
Sbjct: 466 LPKIIEASFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKI 514

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
              V+  + +   ++G+E   ++S
Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|254779018|ref|YP_003057123.1| arginyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000929|emb|CAX28865.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)E
           [Helicobacter pylori B38]
          Length = 541

 Score =  280 bits (715), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 289/571 (50%), Gaps = 49/571 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82
           +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I         F 
Sbjct: 9   LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFD 68

Query: 83  --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139
             +A KG+IN  LS  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+G
Sbjct: 69  SVVACKGYINFTLSLDFLERFTQKALELKEKFGSQIKSERSQKIFLEFVSANPTGPLHIG 128

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE 
Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYKEHVLKESVTYPEV 188

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+D+L AL I  D +
Sbjct: 189 FYKGEYIIEIAKKANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSY 248

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE +  +   +    + + L +   +YE                   ++  +S++  D+
Sbjct: 249 ASEKEVFKHKDA----VFERLEKANALYE----------------KDSKIWLKSSLYQDE 288

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR L+K D SYTY   D+ Y   K+++ +   I + G+DH GY+ R++A    +     
Sbjct: 289 SDRVLIKGDRSYTYLTGDVIYHDKKFQQNYTKYINIWGADHHGYIARVKASLEFLGHDSN 348

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ VLL ++VRL +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD 
Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDV 408

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497
             +K+Q   NP++Y+ YA +R  ++  ++           F +  I Q      +  E  
Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKY 458

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555
           L+      P+ +E++       K+  Y   LAS FH  ++ G+  + P+ + +       
Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
               L++   V+  + +   ++G+E   ++S
Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|254457523|ref|ZP_05070951.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207086315|gb|EDZ63599.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 523

 Score =  280 bits (715), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 164/506 (32%), Positives = 270/506 (53%), Gaps = 41/506 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
            +V+E+P+D   GH +T  A  L++ L   P+ IAE + +    + ++ S   + KG++N
Sbjct: 8   EVVLEKPKDRTFGHFATPIAFSLAKELRKSPMVIAEDLASSFN-ESEIFSSVESVKGYLN 66

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             LS  +L +     + +  E+G+    K +K+ +EFVSANPTGP+H+GH R AV GDTL
Sbjct: 67  FRLSEDFLNEYGDWALQNQSEFGKQ--EKKSKILLEFVSANPTGPLHIGHARGAVYGDTL 124

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L    GY++T EYY+ND+G QI+ L LS+    ++ +     + PE YY G YL+ + 
Sbjct: 125 YKLAKHLGYDITAEYYVNDSGNQIDLLGLSIQLYGRENILKESVEYPESYYRGEYLEGLA 184

Query: 211 KELADKYSSELL-NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           K   +K+  E+L +   +K L +   ++   +M I+ + L   NI  D F++E   +   
Sbjct: 185 KGAVEKFGKEILSDESRQKELAL---WAKDGVMDIVVNTLADTNIHFDTFVNESSLYND- 240

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
                            +E ++        +K D    ++   S   GDD DR +++ DG
Sbjct: 241 -----------------WERVMKKMGDGIYKKDD----KVWIASEAKGDDNDRVVVREDG 279

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY A D+ Y   K+ERG+D+ I + G+DH GY+ R+ A    +    +++  LL ++V
Sbjct: 280 RPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIPRVNAAVEYLGYDSSKLETLLSQMV 339

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L +DG P KMSKRAG+ I +  +V+E+GSD++RF+   +K+   L+FD  + K+Q   N
Sbjct: 340 SLLKDGEPYKMSKRAGNVILMSDIVEEIGSDALRFIFASKKSDTALEFDLSEFKKQDSSN 399

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPR 507
           P+FY+QYA+AR ++I  ++           + R  I   S    D +   L+      P 
Sbjct: 400 PIFYIQYAHARIQTILSKSN----------YSREEISASSLKGLDENADSLLFDALLLPE 449

Query: 508 VIENATIAQEPYKLAFYLYDLASVFH 533
           +IE+A  +++  KL  YL  LA+  H
Sbjct: 450 IIEDAFSSRQVQKLTDYLKALAASLH 475


>gi|319441082|ref|ZP_07990238.1| arginyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 558

 Score =  280 bits (715), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 174/532 (32%), Positives = 269/532 (50%), Gaps = 33/532 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  +    + +     ++  I+ D+ V+ERPR+  HG  +TN A+  ++  G +P  
Sbjct: 4   ADLSVLISGAARTVLTDHGLDPAIVPDQPVVERPRNPEHGDYATNIALQTAKKAGTNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +     VD   +AG GFIN+ L+     ++++ I+ +G  YG      G ++
Sbjct: 64  LGTWLAEALAAADGVDEATVAGPGFINIRLAADAQGRLVTDILTAGDAYGTGDDYTGQRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++A  G +VTREYY ND G QI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLAARGAQVTREYYFNDHGTQIDRFARSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++ +  + +  +  + +   I +   V  M  
Sbjct: 184 AAKG------EPAPEDGYGGDYIADITDQVIEA-TPDWADHSDGEIQEIFRSQGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L     + D+F  E+     +   +   I  L   G +YE               
Sbjct: 237 HIKRTLAEFGTEFDVFFHENALF--ESGAVEKAIQTLKDNGNLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSDG+  Y A D+AY   K +RG D  IY++G+DH GY
Sbjct: 281 --EGAWWLRSSNFGDDKDRVVIKSDGNAAYIAGDIAYIADKIDRGHDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+     Q+ VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 VARLKAAAAALGYNPEQVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFP 481
           + ++       LD D      Q+ +NPVFYVQY +AR  S+ R+A++    L  D     
Sbjct: 399 YALIRSSVDSSLDIDMDLWTSQTSDNPVFYVQYGHARLCSLGRKAEENGISLPEDLSTLD 458

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
              +  + E D     LI  L E+P V+  A   +EP+++A Y   LA  FH
Sbjct: 459 LGTLTHDREGD-----LIRTLGEFPDVLATAAELREPHRVARYAEHLAGTFH 505


>gi|257438475|ref|ZP_05614230.1| arginine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199054|gb|EEU97338.1| arginine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 604

 Score =  280 bits (715), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 296/580 (51%), Gaps = 41/580 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83
           L   ++E P D  +G +++N AM  +R     P  IA+ ++A +   P ++ SVF    +
Sbjct: 43  LPAFIVEIPADTKNGDIASNLAMAGARTWRKAPKMIADALLAHL---PSIEHSVFAKVEV 99

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL+L+PS+   ++     S  EYGR   GKG K N+EFVSANPTGPMH+G+ R 
Sbjct: 100 AGPGFINLFLAPSFWASVVLG-ACSNKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202
             +GD LA+++ +SGY+VTRE+YINDAG QI     S+  RY Q     ++  LP   Y 
Sbjct: 159 GALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEETYPLPAECYQ 218

Query: 203 GVYLKHVGKELA----DKYSSELLNFPEEKWLP---------IVKDYSVQAMMKIIRDDL 249
           G  +K +  E A    DKY +      EE              + DY++   +  ++ DL
Sbjct: 219 GGDIKVLAGEFAEINGDKYVAACSGLDEEALFASEAFETLKNALVDYALPKNIAALKRDL 278

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306
               I +D++  E   H  +   + D+++ L   G  Y   +G +    ++   K     
Sbjct: 279 GKYRIDYDVWFHESTLH--ESGAVLDVVNKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 336

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           K+     T   +  D  L++++G  TYFAAD+AY   K   RGF   I V G+DH G+V 
Sbjct: 337 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  DS RF+
Sbjct: 396 RMKGAMDAIGLNGNDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    +DFD  +  +   +NPV+YVQYA+AR  SI ++ +               +
Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKME----SEGVAFAGAEQV 511

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 D SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  + + R     
Sbjct: 512 DATLLTDPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR----- 566

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +Q  +  +   RL L   V ++I + L +  +  P +M
Sbjct: 567 --IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604


>gi|294786695|ref|ZP_06751949.1| arginine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226309|ref|ZP_07868097.1| arginyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|294485528|gb|EFG33162.1| arginine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120441|gb|EFT83573.1| arginyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 606

 Score =  279 bits (714), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 183/599 (30%), Positives = 295/599 (49%), Gaps = 80/599 (13%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D+I + RP+D +HG  +TN AM L +  G+ P  +A+     ++ DP + SV +AG GFI
Sbjct: 45  DKIAVMRPKDRSHGDWATNIAMQLGKKAGMAPRDLAQKFAQALQADPGIASVEVAGPGFI 104

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L+ +   +I+  I+     +G N    G  +N+EFVSANPTGP+H+G  R A +GD 
Sbjct: 105 NITLNAASASQIVDQILDQKAAFGTNDHLAGKTLNLEFVSANPTGPIHIGGTRWAAIGDA 164

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA ++  +G  V REYY ND G QIN  A S+          +  + P   Y G Y+  +
Sbjct: 165 LARILQANGAHVIREYYFNDHGEQINRFAKSLV------AAAHGEEAPADGYKGAYIDEI 218

Query: 210 GKELADKYSSE---LLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250
            +++ D+  +E   +L+ P      +    P+ +  S Q           M   I+  + 
Sbjct: 219 AQKVIDQAKAESIDVLSLPRVDGGKDADGQPLGEGDSEQREEFRKRAVPMMFDEIKQSMA 278

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE-GILPPPKSKTTQKCDMDRKQ- 308
              +  D++  E+                      VYE G +     +     D+ RK  
Sbjct: 279 DFRVNFDVYFHENS---------------------VYEDGEVDAAFQRLKDLGDIYRKDG 317

Query: 309 -LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---IYVMGSDHSGYV 364
              F+ST  GDD DR ++KS+G   Y   D+AY+  K  R  D     IY++G+DH GYV
Sbjct: 318 ATWFKSTKYGDDKDRVIIKSNGEAAYIMGDIAYYWNKRHRKQDPADIAIYMLGADHHGYV 377

Query: 365 KRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+AV AA   E    + +L+ +LV + + G P++MSKRAG+ +T+  +V  VG D+ R
Sbjct: 378 NRLQAVCAAFGDEPNYNMQILIGQLVNVVKGGQPVRMSKRAGNVVTIDDLVGVVGVDATR 437

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLF 480
           + +     ++ +D D   + + S ENPV+YVQYA+AR +++ R A          D  L 
Sbjct: 438 YSLERTSYTQNIDIDLDLLSQHSNENPVYYVQYAHARSKNVDRNAAAAGLTVGGADLSLL 497

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                  ++E D+   +++  LA YP V+ +A    EP++LA YL DLA  +H  ++  R
Sbjct: 498 -------DTEADS---EILAQLALYPSVVASAADLNEPHRLAHYLEDLAGKYHQWYAAER 547

Query: 541 ENP--------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P               ++  +         RL+L  A A +  +GL ++ + +P++M
Sbjct: 548 VVPMELTEKEAQSADAQAIKVAKDPEPARAAARLKLNDAAAQVFENGLGLLAITAPDKM 606


>gi|189501392|ref|YP_001960862.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|229558754|sp|B3EQ83|SYR_CHLPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189496833|gb|ACE05381.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 553

 Score =  279 bits (714), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 183/563 (32%), Positives = 296/563 (52%), Gaps = 42/563 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           I IE+P D   G  STN A++L+   G++P  +A+ I   +   +  V    IAG GFIN
Sbjct: 24  IKIEKPSDSRFGDFSTNIALVLAGECGMNPRQLAQKITENLSFSETTVSKTEIAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL P+++ K +  I+ S   +GR   G+G    +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FYLEPAFIMKQVEQIITSSDRFGRGAAGEGKNAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++   GY VTREYY NDAG Q++ L+ SV  RY + L     + PE +Y G Y++ + 
Sbjct: 144 ANILEAHGYTVTREYYFNDAGRQMSILSESVRLRYIE-LCGIAVEFPETHYQGDYIREIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             + +K+  +L+   E     + K  +   +   I++ L  L+I HD + +E   ++ D 
Sbjct: 203 AAILEKHGEKLV---ESDSTELFKQTAETHIFTHIKNTLHRLDITHDSYFNEHRLYQEDE 259

Query: 271 ---SPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              SP + +ID L ++G++  Y+G                     F +T +G + D+ L+
Sbjct: 260 SGISPNQQVIDALRQKGFIDHYDG------------------ATWFMTTRLGQEKDKVLV 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   K+ERGFD ++ + G+DH   Y   +EA+   +     +I V 
Sbjct: 302 KSSGEPSYRLPDIAYHVTKFERGFDEIVNIFGADHIDEYPDVIEAL-KILGYDTDRIRVA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    +G  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDIDLAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHL 502
           QSK+NPVFY+QYA+AR  S+ R A++   +  F L   +         TS  E+QL   L
Sbjct: 421 QSKDNPVFYLQYAHARICSLLRIAEN---EAGFSLEEGSADAHLMGKLTSAHEIQLGFTL 477

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +YP VI+      EP K+  YL+ +A ++H  +   +E P L+     +  +   RL L
Sbjct: 478 LDYPDVIQTCARILEPQKMVEYLHSVAELYHRFY---QECPILK----ADPDIRSARLIL 530

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++ +G  I+G+ +P  M
Sbjct: 531 SLATRQVLRNGFRILGISAPKSM 553


>gi|109947543|ref|YP_664771.1| arginyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123173388|sp|Q17X54|SYR_HELAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109714764|emb|CAJ99772.1| argS [Helicobacter acinonychis str. Sheeba]
          Length = 541

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 284/564 (50%), Gaps = 49/564 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87
            ++IE P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG
Sbjct: 16  EVIIEHPKDREHGHYATPIAFNLAKIFKKSPLVIAEELALKISTHAKTQGFFDSVVACKG 75

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN  LS  +L +     +    ++G     + + K+ +EFVSANPTGP+H+GH R AV 
Sbjct: 76  YINFTLSLDFLERFTQKALELKEKFGSKFKSENSQKIFLEFVSANPTGPLHIGHARGAVF 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+
Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKEGVTYPEVFYKGEYI 195

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             + K+  +     L    EE  + ++  Y+   M+  I+D+L +L I  D + SE +  
Sbjct: 196 IEIAKKAHNDLEPSLFKENEETIIEVLSSYAKDLMLLEIKDNLDSLGIHFDSYASEKEIF 255

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +   +    +  NL +   +YE                   ++  +S++  D+ DR L+K
Sbjct: 256 KHKDA----VFKNLEKANALYE----------------KDSKIWLKSSLYQDESDRVLVK 295

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D +YTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL 
Sbjct: 296 EDKNYTYLAGDIVYHNEKFKQNYTKYINIWGADHHGYIARVKASLKFLGYDSNKLEVLLA 355

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++V L +D  P KMSKRAG+FI ++ VVD++G D++RF+ L ++    L+FD   +K+Q 
Sbjct: 356 QMVGLLKDNEPYKMSKRAGNFILIKDVVDDIGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504
             NP++Y+ YA +R  ++  ++           F +  I Q      +  E  L+     
Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKYLLFSALS 465

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562
            P++IE +       K+  Y   LAS FH  ++ G+  + P+           T   L++
Sbjct: 466 LPKIIEASFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPK-----------TKELLKI 514

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
              V+  + +   ++G+E   ++S
Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|291457069|ref|ZP_06596459.1| arginine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291380904|gb|EFE88422.1| arginine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 620

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/615 (29%), Positives = 310/615 (50%), Gaps = 86/615 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  IDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +              EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDTVLAAAPAVDGDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA----LYNN 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A        
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANKLGGAGY 213

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PIVKD-------- 235
            ++ P   Y G Y+  +   +  +  ++ +N      +++ L     P+ +D        
Sbjct: 214 QTETPCDGYKGAYINEIAARVEAEAKADGVNLTALAHQDQGLNDDGEPLGEDDTEVREEF 273

Query: 236 --YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
              +V  M   I+  +K   +  D++  E+  +      +   I+ L   G +Y+     
Sbjct: 274 RKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DKKVEAAIEELKSHGDIYD----- 326

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FD 350
            K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R     D
Sbjct: 327 -KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPAD 375

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ +T
Sbjct: 376 VAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVT 435

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R A 
Sbjct: 436 IDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAA 495

Query: 470 DI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                +   D  L        ++E D    +++  LA++P V+  A   ++P+K+A YL 
Sbjct: 496 AAGISYEGADLSLL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARYLE 545

Query: 527 DLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASII 570
           +LA+ +H  ++  R       +P  R      + L +           RL+L  AV  +I
Sbjct: 546 ELAATYHKWYNVERVVPMALTDPETRGDNEARKALEIAKNPEPARAAARLKLNDAVQQVI 605

Query: 571 NSGLNIIGVESPNEM 585
            +GL+++GV +P +M
Sbjct: 606 ANGLDLLGVTAPEKM 620


>gi|325997202|gb|ADZ49410.1| Arginyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 541

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 289/571 (50%), Gaps = 49/571 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82
           +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I         F 
Sbjct: 9   LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKTQGFFD 68

Query: 83  --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139
             +A KG+IN  LS  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+G
Sbjct: 69  SVVACKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIG 128

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE 
Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEV 188

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+ +L AL I  D +
Sbjct: 189 FYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGIHFDSY 248

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE +  +   +    + + L R   +YE                   ++  +S++  D+
Sbjct: 249 ASEREIFKHKDA----VFERLERANALYE----------------KDSKIWLKSSLYQDE 288

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +     
Sbjct: 289 SDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSN 348

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD 
Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDV 408

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497
             +K+Q   NP++Y+ YA +R  ++  ++           F +  I Q      +  E  
Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKY 458

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555
           L+      P+ +E++       K+  Y   LAS FH  ++ G+  + P+ + +       
Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
               L++   V+  + +   ++G+E   ++S
Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|322691947|ref|YP_004221517.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456803|dbj|BAJ67425.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 620

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 180/614 (29%), Positives = 314/614 (51%), Gaps = 84/614 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDTVLAAGAMTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R    
Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 373

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A      + ++     ++  E++      +++  LA++P VI  A   ++P+K+A YL +
Sbjct: 494 AA--VAGISYEGADLALLDTEADG-----EVLAALAQFPSVIATAADDRQPHKVARYLEE 546

Query: 528 LASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIIN 571
           LA+ +H  ++  R       +P  R      + L +           RL+L  AV  +I 
Sbjct: 547 LAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIA 606

Query: 572 SGLNIIGVESPNEM 585
           +GL+++GV +P +M
Sbjct: 607 NGLDLLGVTAPEKM 620


>gi|227546999|ref|ZP_03977048.1| arginine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227212531|gb|EEI80420.1| arginine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 640

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/617 (29%), Positives = 313/617 (50%), Gaps = 90/617 (14%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 54  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 113

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 114 INITLDSASAAAVVDTVLAAGAMTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 173

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 174 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 231

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 232 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 291

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 292 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 346

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R    
Sbjct: 347 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 393

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 394 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 453

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 454 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 513

Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           A      +   D  L        ++E D    +++  LA++P V+  A   ++P+K+A Y
Sbjct: 514 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 563

Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568
           L +LA+ +H  ++  R       +P  R      + L +           RL+L  AV  
Sbjct: 564 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 623

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL+++GV +P +M
Sbjct: 624 VIANGLDLLGVTAPEKM 640


>gi|305431795|ref|ZP_07400962.1| arginine--tRNA ligase [Campylobacter coli JV20]
 gi|304444879|gb|EFM37525.1| arginine--tRNA ligase [Campylobacter coli JV20]
          Length = 530

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 174/562 (30%), Positives = 293/562 (52%), Gaps = 45/562 (8%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P++IA  + A+ +     D V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELRKSPISIANELAAKFQEHSYFDKV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  LS ++L ++ +  + +  E+ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  LNGYLNFRLSKTFLNELANKALQNPNEFSKGE-DKTESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +   NPV+Y+ YA+AR   +F +A     D +  DL            +   + L+    
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLLFEAL 455

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
               V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       L+L 
Sbjct: 456 NLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------LLKLF 506

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  I +  +++G+E+ N+M
Sbjct: 507 SLVALSIKTAFSLMGIEAKNKM 528


>gi|15644947|ref|NP_207117.1| arginyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501046|sp|P56128|SYR_HELPY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2313419|gb|AAD07388.1| arginyl-tRNA synthetase (argS) [Helicobacter pylori 26695]
          Length = 541

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 288/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     LL   EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLLKENEETIIEVLSGYARDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFEQLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q   +  +  E  L+      P+ IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKAIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ +          ++++ L+  V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAK---------ELLKICLI--VSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|325995606|gb|ADZ51011.1| Arginyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 541

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 289/571 (50%), Gaps = 49/571 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82
           +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I         F 
Sbjct: 9   LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKTQGFFD 68

Query: 83  --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139
             +A KG+IN  LS  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+G
Sbjct: 69  SVVAFKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIG 128

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE 
Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEV 188

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+ +L AL I  D +
Sbjct: 189 FYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGIHFDSY 248

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE +  +   +    + + L R   +YE                   ++  +S++  D+
Sbjct: 249 ASEREIFKHKDA----VFERLERANALYE----------------KDSKIWLKSSLYQDE 288

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +     
Sbjct: 289 SDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSN 348

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD 
Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDV 408

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497
             +K+Q   NP++Y+ YA +R  ++  ++           F +  I Q      +  E  
Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKY 458

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555
           L+      P+ +E++       K+  Y   LAS FH  ++ G+  + P+ + +       
Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
               L++   V+  + +   ++G+E   ++S
Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|189347953|ref|YP_001944482.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|229558752|sp|B3EIJ1|SYR_CHLL2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189342100|gb|ACD91503.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 551

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 187/564 (33%), Positives = 294/564 (52%), Gaps = 46/564 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFIN 90
           + IE+P D  +G  STN A++LS+    +P  +A ELI   I  D  V+ + IAG GFIN
Sbjct: 24  VQIEKPTDKKNGDFSTNIALLLSKECRRNPRELAAELIGQMIFPDGTVERIEIAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+P ++ + +  I++ G  YG +  GKG    +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FYLTPLFIMQSVEHILLEGKGYGSSCAGKGKTAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+A  GY +TREYY NDAG Q+  L  SV +RY +     D   PE +Y G Y++ + 
Sbjct: 144 ANLLATQGYGLTREYYFNDAGRQMQILGESVRYRYMERC-GRDIVFPESHYQGEYIREIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH--RG 268
           + L  ++ S L++      L I KD +   +   I+  L  ++I+HD F +E   +   G
Sbjct: 203 EILFLEHESSLID---SDNLSIFKDTAEAIIFSSIKKTLARIDIRHDSFFNEHTLYIAEG 259

Query: 269 DPSPIRD-IIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     D +++ L  +G++  Y+G                     F +T +G + D+ L+
Sbjct: 260 NGKSANDRVLELLESKGFIDRYDG------------------ATWFLTTKLGQEKDKVLV 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   KY R FD ++ V G+DH   Y   LEA+   +    +++ V 
Sbjct: 302 KSSGEPSYRLPDIAYHLDKYRRKFDLIVNVFGADHIDEYPDVLEAL-RILGHDTSKMRVA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    DG  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVDGETVKMSTRKGNADLLDELIDDVGADATRLFFIMRSKDSHLNFDIELAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           QSK+NPVFY+QYA+AR  S+ R A +     PD       + +  +       E+QL   
Sbjct: 421 QSKDNPVFYLQYAHARICSLLRIAAEEAGFKPDGSGAHLLQKLTLE------PEIQLGFT 474

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L +YP VI  A    EP K+  YL+ +A  +H  +   +E P L+     +  +   RL 
Sbjct: 475 LLDYPEVIRTAIRLLEPQKMVEYLHSVAEQYHKFY---QECPILK----ADPDIRTARLF 527

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +G  I+G+ +P  M
Sbjct: 528 LSLATRQVLRNGFTILGISAPESM 551


>gi|320459349|dbj|BAJ69970.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 640

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/612 (29%), Positives = 313/612 (51%), Gaps = 80/612 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 54  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 113

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 114 INITLDSASAAAVVDTVLAAGAVTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 173

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--- 193
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A    D   
Sbjct: 174 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANNLGDAGY 233

Query: 194 -SDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI----------V 233
            ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+           
Sbjct: 234 QTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVREEF 293

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++     
Sbjct: 294 RKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD----- 346

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FD 350
            K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R     D
Sbjct: 347 -KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPAD 395

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ +T
Sbjct: 396 VAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVT 455

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R A 
Sbjct: 456 IDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAA 515

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                + ++     ++  E++      +++  LA++P V+  A   ++P+K+A YL +LA
Sbjct: 516 --VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEELA 568

Query: 530 SVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSG 573
           + +H  ++  R       +P  R      + L +           RL+L  AV  +I +G
Sbjct: 569 ATYHKWYNVERVVPMVLTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIANG 628

Query: 574 LNIIGVESPNEM 585
           L+++GV +P +M
Sbjct: 629 LDLLGVTAPEKM 640


>gi|217077840|ref|YP_002335558.1| arginyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037695|gb|ACJ76217.1| arginyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 543

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 183/556 (32%), Positives = 293/556 (52%), Gaps = 41/556 (7%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P D   G  STN A+I S+     P  +A+L V ++  +     V IAG GFIN  +
Sbjct: 25  VEIP-DENFGDYSTNIALIGSKHFKKPPREVAKLFVDKLSKESIFSEVTIAGPGFINFRI 83

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S  +   ILS ++     Y + +     K+ +E+ SANPTGP  VGH R  V+GD L ++
Sbjct: 84  SKDFYLSILSEMIKKEKAYWK-IQKNNKKIQLEYGSANPTGPFTVGHGRQIVIGDVLGNV 142

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + F GY+VT+E YINDAG QI  L  S++ RY + L+  + +LPE  Y G YL    K+L
Sbjct: 143 LEFLGYDVTKEMYINDAGRQIRLLGRSLWVRYNE-LFGKEYELPEDGYRGDYLIDFAKKL 201

Query: 214 ADKYSSELLNFPEEKWLPIVKD----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            D    E+ N   EKW   V+     YSV+ ++K + D L  L+   D            
Sbjct: 202 KD----EIGNKYVEKWDDEVEKFFMKYSVENILKTMDDTLSMLDCGFD------------ 245

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            S +++    +  +GYV + +L   K K           +  + + V D+ D+ L++SDG
Sbjct: 246 -SKVKESF--VIEKGYV-DIVLNKFKEKNM--IYEKDGAVWLKVSKVIDENDKVLIRSDG 299

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +YTYF  D+AY   K+ RG+D +  + GSDH G++ R+ A    +   ++ ++ +L + V
Sbjct: 300 TYTYFLTDIAYHYYKFTRGYDRVYDIFGSDHHGHIPRMIAAMKLLDIDESFVHFILHQFV 359

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R+   +KMS RAG+FITL  ++ EVG D+ R+       +  L FD    K +S +N
Sbjct: 360 TLKRNDEIVKMSTRAGNFITLDELIKEVGKDATRYFFAMNDVNTHLIFDLELAKSKSNDN 419

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYAYAR  SIF +AK+   D+DF +   N+   E+E    E+ +I  + E+   +
Sbjct: 420 PVYYVQYAYARINSIFEKAKE--KDIDFKILD-NIELLENE---HEMSIIKMMDEFIHSL 473

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  Y++ L+  FH ++S      + + +   N+ L+  R+ L+ A+ ++
Sbjct: 474 YQVEEKLSPHYLTNYIFSLSEKFHSYYS------KYKILDEENKSLSNARMNLIFALKNV 527

Query: 570 INSGLNIIGVESPNEM 585
                 ++G+ +P +M
Sbjct: 528 FEISFELLGISAPEKM 543


>gi|213693168|ref|YP_002323754.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254782943|sp|B7GNM0|SYR_BIFLI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|213524629|gb|ACJ53376.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 620

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 178/612 (29%), Positives = 313/612 (51%), Gaps = 80/612 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDTVLAAGAVTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--- 193
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A    D   
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANNLGDAGY 213

Query: 194 -SDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI----------V 233
            ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+           
Sbjct: 214 QTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVREEF 273

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++     
Sbjct: 274 RKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD----- 326

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FD 350
            K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R     D
Sbjct: 327 -KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPAD 375

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ +T
Sbjct: 376 VAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVT 435

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R A 
Sbjct: 436 IDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAA 495

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                + ++     ++  E++      +++  LA++P V+  A   ++P+K+A YL +LA
Sbjct: 496 --VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEELA 548

Query: 530 SVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSG 573
           + +H  ++  R       +P  R      + L +           RL+L  AV  +I +G
Sbjct: 549 ATYHKWYNVERVVPMVLTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIANG 608

Query: 574 LNIIGVESPNEM 585
           L+++GV +P +M
Sbjct: 609 LDLLGVTAPEKM 620


>gi|23336003|ref|ZP_00121233.1| COG0018: Arginyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189440467|ref|YP_001955548.1| arginyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|238692032|sp|B3DPJ1|SYR_BIFLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189428902|gb|ACD99050.1| Arginyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 620

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 314/614 (51%), Gaps = 84/614 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDTVLAAGAMTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R    
Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 373

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A      + ++     ++  E++      +++  LA++P V+  A   ++P+K+A YL +
Sbjct: 494 AA--VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEE 546

Query: 528 LASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIIN 571
           LA+ +H  ++  R       +P  R      + L +           RL+L  AV  +I 
Sbjct: 547 LAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIA 606

Query: 572 SGLNIIGVESPNEM 585
           +GL+++GV +P +M
Sbjct: 607 NGLDLLGVTAPEKM 620


>gi|317181661|dbj|BAJ59445.1| arginyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 541

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISAHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEKFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV REYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLREYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDT- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|319791172|ref|YP_004152812.1| arginyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315593635|gb|ADU34701.1| arginyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 561

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 182/571 (31%), Positives = 294/571 (51%), Gaps = 51/571 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           +   E P+  AHG  ++ AAM L++PL   P  +AE + A +   P     V+++ IAG 
Sbjct: 26  KAAFESPKVAAHGDFASTAAMQLAKPLAKKPRELAEQLSAALLATPAFGQWVEAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L  +  ++I+  ++ +G  +G+     G KV +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKTAAKQQIVREVLAAGNTFGQQ-PATGEKVLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYP 202
           GD + +L A  G  V RE+Y NDAG QI TLA S   R  +     D + P G     Y 
Sbjct: 145 GDAICNLRASQGDSVWREFYYNDAGVQIQTLANSTQLR-ARGFKPGDPEWPSGEKAPAYN 203

Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           G Y+  + ++   K +      E     +   +  +++++V  + +    DL+A  ++ D
Sbjct: 204 GDYIADIAEDFKAKKTVKSDDREYTASGDIDDIDSIREFAVAYLRREQDLDLQAFRVRFD 263

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      +   +  L   G  YE                +   L  +ST  G
Sbjct: 264 NYYLESSLYTS--GRVEAAVGKLVAAGKTYE----------------EDGALWLKSTDYG 305

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           DD DR + K DG+YTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   A  E 
Sbjct: 306 DDKDRVMKKKDGTYTYFVPDVAYHIAKWERGFHKVVNIQGTDHHGTIARVRAGLQAAGEG 365

Query: 378 --KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             +   + +L  +VR+ + G  +K+SKRAG ++TLR +++   +D+VRF +L RK     
Sbjct: 366 IPEGYPDYVLHTMVRVMKGGEEVKISKRAGSYVTLRDLIEWTSTDAVRFFLLSRKPDTEY 425

Query: 436 DFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            FD      ++ +NPV+YVQYA+AR C  +     D     D DL P            +
Sbjct: 426 TFDVDLAVTKNNDNPVYYVQYAHARICSVLAGWGGDAATLKDVDLSPLK--------SPA 477

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L++ LA+YP ++  A+    P+ + FYL +LA+ +H ++   R       +  ++ K
Sbjct: 478 AQALMLLLAKYPAMLTAASKDFAPHDVTFYLRELAASYHSYYDAER-------ILVDDEK 530

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL LV A A ++++GL I+GV +PN+M
Sbjct: 531 VKLARLALVAATAQVLHNGLAILGVSAPNKM 561


>gi|239620904|ref|ZP_04663935.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133789|ref|YP_004001128.1| args [Bifidobacterium longum subsp. longum BBMN68]
 gi|322690014|ref|YP_004209748.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|239516165|gb|EEQ56032.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516548|emb|CBK70164.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
 gi|311773072|gb|ADQ02560.1| ArgS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320461350|dbj|BAJ71970.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 620

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 181/617 (29%), Positives = 314/617 (50%), Gaps = 90/617 (14%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDTVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF---KCKYERG 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+   + + E  
Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENS 373

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493

Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           A      +   D  L        ++E D    +++  LA++P V+  A   ++P+K+A Y
Sbjct: 494 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 543

Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568
           L +LA+ +H  ++  R       +P  R      + L +           RL+L  AV  
Sbjct: 544 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 603

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL+++GV +P +M
Sbjct: 604 VIANGLDLLGVTAPEKM 620


>gi|296454953|ref|YP_003662097.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184386|gb|ADH01268.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 684

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 314/614 (51%), Gaps = 84/614 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 98  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 157

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 158 INITLDSASAAAVVDTVLAAGAVTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 217

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 218 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 275

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 276 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 335

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 336 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 390

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R    
Sbjct: 391 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 437

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 438 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 497

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 498 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 557

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A      + ++     ++  E++      +++  LA++P V+  A   ++P+K+A YL +
Sbjct: 558 AA--VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEE 610

Query: 528 LASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIIN 571
           LA+ +H  ++  R       +P  R      + L +           RL+L  AV  +I 
Sbjct: 611 LAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIA 670

Query: 572 SGLNIIGVESPNEM 585
           +GL+++GV +P +M
Sbjct: 671 NGLDLLGVTAPEKM 684


>gi|110597342|ref|ZP_01385630.1| arginyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341178|gb|EAT59646.1| arginyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 552

 Score =  277 bits (708), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 182/566 (32%), Positives = 296/566 (52%), Gaps = 49/566 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I IE+P D   G  STN A + ++ L  +P  +A+ I+  +   PD +  + +AG GFIN
Sbjct: 24  IRIEQPADKKFGDFSTNIAFLAAKELRKNPRELAQQIIPHLSFPPDTIAKIEVAGAGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+P ++ + +  +++    YG    GKG +  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FYLTPLFIMQSVEQVLLYTDRYGEGASGKGKRAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L A  GY++TREYY NDAG Q+  L  SV  RY++ L     + P  +Y G Y++ + 
Sbjct: 144 ANLFATQGYDITREYYFNDAGRQMQILGESVKLRYRE-LCGQIVEFPATHYQGDYIREIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +++ + + + L    E   + + K+ +   +   IR  L+ L I+HD F +E   +  D 
Sbjct: 203 EQVFNDHGAALAGTEE---VDLFKNTAESIIFSAIRATLERLGIRHDSFFNEHTLYTPDE 259

Query: 271 SPI---RDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     + +I+ L  + ++  Y+G                     F +T +G + D+ L+
Sbjct: 260 TGTTANQRVIEALGEKEFISKYDG------------------ATWFMTTKLGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   KY+RGFD ++ V G+DH   Y   +EA+   + E  ++I + 
Sbjct: 302 KSTGEPSYRLPDIAYHLTKYKRGFDVIVNVFGADHIDEYPDVIEALKI-LGEDTSRIRIA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    DG  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVDGQSVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           QS+ENPVFY+ YA+AR  S+ R AK     D   D D+ L      P       +E+QL 
Sbjct: 421 QSRENPVFYLHYAHARICSLLRLAKQEIGFDPHSDPDYHLLRLLDNP-------AEIQLG 473

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L +YP +I+ +    EP K+  YL+ LA +FH  +   +E P L+       ++   R
Sbjct: 474 FALLDYPDMIKTSLRLLEPQKMVEYLHSLAELFHRFY---QECPILK----AEPEIARAR 526

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++ +G  I+GV +P  M
Sbjct: 527 LFLSLATRQVLRNGFRILGVSAPESM 552


>gi|307637012|gb|ADN79462.1| arginyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 541

 Score =  276 bits (707), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 288/571 (50%), Gaps = 49/571 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82
           +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I         F 
Sbjct: 9   LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKTQGFFD 68

Query: 83  --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139
             +A KG+IN  LS  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+G
Sbjct: 69  SVVACKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIG 128

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE 
Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEV 188

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+ +L AL I  D +
Sbjct: 189 FYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGIHFDSY 248

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE +  +   +    + + L R   +YE                   ++  +S++  D+
Sbjct: 249 ASEREIFKHKDA----VFERLERANALYE----------------KDSKIWLKSSLYQDE 288

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +     
Sbjct: 289 SDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSN 348

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD 
Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDV 408

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497
             +K+Q   NP++Y+ YA +R  ++  ++           F +  I Q      +  E  
Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKY 458

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555
           L+      P+ +E++       K   Y   LAS FH  ++ G+  + P+ + +       
Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKKCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
               L++   V+  + +   ++G+E   ++S
Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|317482968|ref|ZP_07941972.1| arginyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915575|gb|EFV36993.1| arginyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 620

 Score =  276 bits (707), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 182/617 (29%), Positives = 313/617 (50%), Gaps = 90/617 (14%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDTVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+  K  R    
Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 373

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493

Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           A      +   D  L        ++E D    +++  LA++P V+  A   ++P+K+A Y
Sbjct: 494 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 543

Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568
           L +LA+ +H  ++  R       +P  R      + L +           RL+L  AV  
Sbjct: 544 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 603

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL+++GV +P +M
Sbjct: 604 VIANGLDLLGVTAPEKM 620


>gi|260577572|ref|ZP_05845511.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258604296|gb|EEW17534.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 551

 Score =  276 bits (706), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 185/561 (32%), Positives = 283/561 (50%), Gaps = 45/561 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR+  HG  +TN AM +++  G +P      +   +     +D   +AG GFIN+ 
Sbjct: 28  TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAHEGIDEATVAGPGFINIR 87

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+ +   KI+  I+ +G  +G      G  +N+EFVSANPTGP+H+G  R A VGD+L  
Sbjct: 88  LAAAAQGKIVEDILTAGANFGHGDELAGAAINLEFVSANPTGPIHLGGTRWAAVGDSLGR 147

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++   G +VTREYY ND GAQI+  A S+    +          PE  Y G Y++ +  +
Sbjct: 148 VLNARGAKVTREYYFNDHGAQIDRFARSLVAAAK------GEPTPEDGYGGDYIQDIASQ 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-P 270
           + +  + +      ++   + +   V+ M   I+  L     + D++  E+  F  G   
Sbjct: 202 IVEA-NPDWQKLGADEAQELFRSQGVELMFAHIKRTLAEFGTEFDVYFHENSLFESGAVE 260

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + I+ I DN    G +YE                       RST  GDD DR ++KSDG+
Sbjct: 261 AAIQKIKDN----GNLYEA----------------DGAWWLRSTNFGDDKDRVVIKSDGN 300

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y A D+AY   K++RG +  IY++G+DH GY+ RL A AAA+     Q+ VL+ +LV 
Sbjct: 301 AAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIARLRAAAAAMGYDPQQVEVLIGQLVN 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  ++MSKRAG  ITL  +V+ +G D+ R+ M+       LD D      +S +NP
Sbjct: 361 LVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYAMIRSSVDSSLDIDMDLWASKSNDNP 420

Query: 451 VFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           VFYVQYA+AR  S+ R+A+D+       D  L   +           E  LI  L E+P 
Sbjct: 421 VFYVQYAHARLCSLARKAEDLGVTREGADLSLLTHD----------REGDLIRTLGEFPA 470

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVH 564
           V++ A   +EP+++A Y   LA  FH  +   +  P+        A N+ L   RL L  
Sbjct: 471 VVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKPSDDEQTVAENKALFAARLSLAA 530

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    + + L ++GV +P  M
Sbjct: 531 ASRQTLANALELLGVAAPERM 551


>gi|308061669|gb|ADO03557.1| arginyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 541

 Score =  276 bits (705), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|154173779|ref|YP_001407667.1| arginyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166232771|sp|A7GWS5|SYR_CAMC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112803557|gb|EAU00901.1| arginyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 529

 Score =  276 bits (705), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 174/563 (30%), Positives = 294/563 (52%), Gaps = 48/563 (8%)

Query: 27  KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFI 83
           KIL R  V+E+P+D +  H +T  A  L++ L   P+ IA  +  + +     +V +V  
Sbjct: 11  KILGRDFVLEKPKDKSLAHYATPLAFSLAKELKKSPVAIANELACKFENSKIFEVSAV-- 68

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
              G++N  L   +L +I    + +G ++      +     IE++SANPTGP+H+GH R 
Sbjct: 69  --NGYLNFKLKGEFLDEISKDALKNGDKFASGKARQDGSTFIEYISANPTGPLHIGHVRG 126

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV GDTLA +    GY++  EYYINDAG QI+ L  S+    +  L++ + + P+ YY G
Sbjct: 127 AVYGDTLARIGTHLGYKIFTEYYINDAGNQIDLLGTSISLAARDVLFHENVEYPQKYYRG 186

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y+  +  E   K+  E+  + E + L +  ++    ++ II+ DL  + I    + SE 
Sbjct: 187 EYIVDIANEALKKFGKEIF-YDEARNLELA-EFGKDIVLDIIKKDLAGVGISIQGWASEK 244

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             ++     +   I+ L R   +YE      K   T             ST +GDD DR 
Sbjct: 245 ALYK----ELEPTIEKLKRSNQMYE------KEGAT----------YIASTTLGDDNDRV 284

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           ++++DG  TY A D+ Y   K+ER +D+ I + G+DH GY+ RL+A    +   + ++ +
Sbjct: 285 VVRNDGRPTYLAGDIIYHNDKFERNYDHYINIWGADHHGYIARLKAAIHFLGYDENRLEI 344

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V L +DG P KMSKRAG+ + +  +V+E+GSD++RF+ + + N+  L+FD  ++K
Sbjct: 345 ILMQMVSLLKDGKPYKMSKRAGNAVLMSDIVEEIGSDALRFIFISKANTSSLEFDIDELK 404

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHL 502
           ++   NP+FY+ YA+AR   IF +A     D LD  L            D +   L+   
Sbjct: 405 KEDSSNPIFYINYAHARVNQIFAKAGKSVSDVLDASL---------ENLDDNAKNLLFEA 455

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
              P ++E+A  +++  K++ YL  LA+ FH  ++  R         AN   L    L+L
Sbjct: 456 LILPEILEDAFASRQLQKVSDYLKSLAASFHKFYNENR-----VIGSANEESL----LKL 506

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              VA  + + L++IG+ + + M
Sbjct: 507 FAVVALSLRTALSLIGITAKDRM 529


>gi|308184122|ref|YP_003928255.1| arginyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060042|gb|ADO01938.1| arginyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 541

 Score =  276 bits (705), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 164/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G  +  + + K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQVKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            ++     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ASNDLKPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q      +  E  L+      P+ +E
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLPKAVE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            + +   ++G+E   ++S
Sbjct: 521 SLTNAFKLLGIEIKTKIS 538


>gi|239813480|ref|YP_002942390.1| arginyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239800057|gb|ACS17124.1| arginyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 561

 Score =  276 bits (705), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 182/571 (31%), Positives = 293/571 (51%), Gaps = 51/571 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86
           +   E P+  AHG  ++ AAM L++PLG  P  +AE + A +   P     V+++ +AG 
Sbjct: 26  KAAFESPKVAAHGDFASTAAMQLAKPLGRKPRELAEELSAALLATPVFGQWVEAIEVAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L  +  ++I+  ++ +G  +G+     G KV +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKTAAKQQIVREVLAAGSAFGQQ-PATGEKVLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYP 202
           GD + +L A  G  V RE+Y NDAG QI TLA S   R  +     D + P G     Y 
Sbjct: 145 GDAICNLRASQGDTVWREFYYNDAGVQIQTLAHSTQLR-ARGFKPGDPEWPSGEKAPAYN 203

Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           G Y+  + ++   K +      E         L  +++++V  + +    DL+A  ++ D
Sbjct: 204 GDYIADIAEDFKAKKTVKSDDREYTASGNIDDLDSIREFAVAYLRREQDLDLQAFRVRFD 263

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      + + +  L   G  YE                    L  +ST  G
Sbjct: 264 NYYLESSLYTS--GRVEEAVRKLVAAGKTYE----------------QDGALWLKSTDYG 305

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375
           DD DR + K DG+YTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   AA V 
Sbjct: 306 DDKDRVMKKQDGTYTYFVPDVAYHIAKWERGFHKVVNIQGTDHHGTIARVRAGLQAAGVG 365

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             +   + +L  +VR+ + G  +K+SKRAG ++TLR +++   +D+VRF +L RK     
Sbjct: 366 IPEGYPDYVLHTMVRVMKGGEEVKISKRAGSYVTLRDLIEWTSTDAVRFFLLSRKPDTEY 425

Query: 436 DFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            FD      ++ +NPV+YVQYA+AR C  +     D     D DL P            +
Sbjct: 426 TFDVDLAVAKNNDNPVYYVQYAHARICSVLAGWGGDATALKDVDLSPLE--------SPA 477

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L++ LA+YP ++  A     P+ + FYL +LA+ +H ++   R       +  ++  
Sbjct: 478 AQALMLLLAKYPAMLTAAAKDFAPHDVTFYLRELAASYHSYYDAER-------ILVDDEP 530

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL LV A A ++++GL I+GV +P++M
Sbjct: 531 VKLARLALVAATAQVLHNGLAILGVSAPSKM 561


>gi|308063179|gb|ADO05066.1| arginyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 541

 Score =  276 bits (705), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEECGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|188527123|ref|YP_001909810.1| arginyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691899|sp|B2USE8|SYR_HELPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188143363|gb|ACD47780.1| arginyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 541

 Score =  276 bits (705), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 286/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q   ++ +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTDLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|317180782|dbj|BAJ58568.1| arginyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 541

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 286/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI+ L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIHLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFEQLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   ++ +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTDLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|308182491|ref|YP_003926618.1| arginyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064676|gb|ADO06568.1| arginyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 541

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYRDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++ +++           F +  I Q   ++ +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLKKSP----------FSKEEILQTPLTDLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|283956573|ref|ZP_06374052.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791822|gb|EFC30612.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 530

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 295/566 (52%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFTLENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALAN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L +   +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKKHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL   N       F+   L+ I
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKTIDDVMGADLQSLNQDGVNLLFEALNLKAI 460

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           +  A   R ++         K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 461 LSDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVIGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|47458959|ref|YP_015821.1| arginyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614400|sp|Q6KIG6|SYR_MYCMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|47458287|gb|AAT27610.1| arginyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 536

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 182/563 (32%), Positives = 294/563 (52%), Gaps = 64/563 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89
           ++++   +D   G  S+N AM+L + LG +PL IA++IV +I  +   ++ + I   GFI
Sbjct: 24  KVILTDAKDF--GDFSSNIAMVLQKDLGKNPLEIAQMIVEKINKEKFLIEKIEIVKPGFI 81

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRN----LIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           N +L   +   +L        ++ +N     + K    N+E+VSANPTG +H+GH R A 
Sbjct: 82  NFFLDHKFYVYLLE-------KFSKNDFLIELEKTYTYNLEYVSANPTGFLHIGHARGAA 134

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +GDTLA+++ F+  +V REYY+NDAG QI+ LA +++ RYQQ L N   +LPE  Y G  
Sbjct: 135 IGDTLANILEFANNKVIREYYVNDAGNQISILAYALYIRYQQILGNKTLNLPEDSYHGED 194

Query: 206 LKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           +K+  K    KY  +  N      +    KD  V+  ++ I+ DLK   ++ D++ SE  
Sbjct: 195 IKYFAKIFHKKYQEKFKNVDYSLEVENFFKDEGVKIALEKIKLDLKTFRVEFDLYTSEKS 254

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ---LLFRSTMVGDDVD 321
            +                          P   K+ +K     +Q   L  ++T  GDD D
Sbjct: 255 IY--------------------------PLIEKSLKKLKNTYEQDGALWLKTTDYGDDKD 288

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           R L+K+DG+YTYFA DLAY   K  R    D +I   G+DH GYVKR++         K 
Sbjct: 289 RVLIKNDGTYTYFAPDLAYHYVKKTRSENVDYLIDFFGADHIGYVKRMQIALEQFGFSKD 348

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            +NVL+ E+V+L ++G    MSKR G  I+L  +++ +G D+ RF ++   +S  LD + 
Sbjct: 349 TLNVLILEMVKLRKNGTEFVMSKRKGTAISLEDLIELIGVDNARFFLVDHSSSSKLDLEI 408

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             + E++  N  F +QYAYAR  SI  + K     LD  L  +   P + +F   E++L+
Sbjct: 409 DLIAEKNLSNGAFIIQYAYARTNSILEKTK---VTLDVKLIRK---PFDDKF---EMKLV 459

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L E+P +IE      + + L+ YL  LA  F+  +S+ +       +  +  +L ++ 
Sbjct: 460 NVLKEFPILIEKIAENFKIHLLSQYLITLAKSFNSFYSNSK-------IIDSEEELKLIL 512

Query: 560 LQLVHAVASIINSGLNIIGVESP 582
             LV A  +++  GL+++ VE+P
Sbjct: 513 --LVKATQAVLKKGLDLLKVEAP 533


>gi|68536439|ref|YP_251144.1| arginyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68264038|emb|CAI37526.1| argS [Corynebacterium jeikeium K411]
          Length = 592

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 185/561 (32%), Positives = 282/561 (50%), Gaps = 45/561 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR+  HG  +TN AM +++  G +P      +   +     +D   +AG GFIN+ 
Sbjct: 69  TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAHEGIDEATVAGPGFINIR 128

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+ +   KI+  I+  G  +G      G  +N+EFVSANPTGP+H+G  R A VGD+L  
Sbjct: 129 LAAAAQGKIVEDILTVGANFGHGDELAGAAINLEFVSANPTGPIHLGGTRWAAVGDSLGR 188

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++   G +VTREYY ND GAQI+  A S+    +          PE  Y G Y++ +  +
Sbjct: 189 VLNARGAKVTREYYFNDHGAQIDRFARSLVAAAK------GEPTPEDGYGGDYIQDIASQ 242

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-P 270
           + +  + +      ++   + +   V+ M   I+  L     + D++  E+  F  G   
Sbjct: 243 IVEA-NPDWQKLGADEAQELFRSQGVELMFAHIKRTLAEFGTEFDVYFHENSLFESGAVE 301

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + I+ I DN    G +YE                       RST  GDD DR ++KSDG+
Sbjct: 302 AAIQKIKDN----GNLYEA----------------DGAWWLRSTNFGDDKDRVVIKSDGN 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y A D+AY   K++RG +  IY++G+DH GY+ RL A AAA+     Q+ VL+ +LV 
Sbjct: 342 AAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIARLRAAAAAMGYDPQQVEVLIGQLVN 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  ++MSKRAG  ITL  +V+ +G D+ R+ M+       LD D      +S +NP
Sbjct: 402 LVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYAMIRSSVDSSLDIDMDLWASKSNDNP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           VFYVQYA+AR  S+ R+A+D+       D  L   +           E  LI  L E+P 
Sbjct: 462 VFYVQYAHARLCSLARKAEDLGVTREGADLSLLTHD----------REGDLIRTLGEFPA 511

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVH 564
           V++ A   +EP+++A Y   LA  FH  +   +  P+        A N+ L   RL L  
Sbjct: 512 VVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKPSDDEQTVAENKALFAARLSLAA 571

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    + + L ++GV +P  M
Sbjct: 572 ASRQTLANALELLGVAAPERM 592


>gi|109894984|sp|Q4JUI1|SYR_CORJK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 556

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 185/561 (32%), Positives = 282/561 (50%), Gaps = 45/561 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR+  HG  +TN AM +++  G +P      +   +     +D   +AG GFIN+ 
Sbjct: 33  TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAHEGIDEATVAGPGFINIR 92

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+ +   KI+  I+  G  +G      G  +N+EFVSANPTGP+H+G  R A VGD+L  
Sbjct: 93  LAAAAQGKIVEDILTVGANFGHGDELAGAAINLEFVSANPTGPIHLGGTRWAAVGDSLGR 152

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++   G +VTREYY ND GAQI+  A S+    +          PE  Y G Y++ +  +
Sbjct: 153 VLNARGAKVTREYYFNDHGAQIDRFARSLVAAAK------GEPTPEDGYGGDYIQDIASQ 206

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-P 270
           + +  + +      ++   + +   V+ M   I+  L     + D++  E+  F  G   
Sbjct: 207 IVEA-NPDWQKLGADEAQELFRSQGVELMFAHIKRTLAEFGTEFDVYFHENSLFESGAVE 265

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + I+ I DN    G +YE                       RST  GDD DR ++KSDG+
Sbjct: 266 AAIQKIKDN----GNLYEA----------------DGAWWLRSTNFGDDKDRVVIKSDGN 305

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y A D+AY   K++RG +  IY++G+DH GY+ RL A AAA+     Q+ VL+ +LV 
Sbjct: 306 AAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIARLRAAAAAMGYDPQQVEVLIGQLVN 365

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +DG  ++MSKRAG  ITL  +V+ +G D+ R+ M+       LD D      +S +NP
Sbjct: 366 LVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYAMIRSSVDSSLDIDMDLWASKSNDNP 425

Query: 451 VFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           VFYVQYA+AR  S+ R+A+D+       D  L   +           E  LI  L E+P 
Sbjct: 426 VFYVQYAHARLCSLARKAEDLGVTREGADLSLLTHD----------REGDLIRTLGEFPA 475

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVH 564
           V++ A   +EP+++A Y   LA  FH  +   +  P+        A N+ L   RL L  
Sbjct: 476 VVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKPSDDEQTVAENKALFAARLSLAA 535

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    + + L ++GV +P  M
Sbjct: 536 ASRQTLANALELLGVAAPERM 556


>gi|171319601|ref|ZP_02908697.1| arginyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095172|gb|EDT40174.1| arginyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 539

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 188/568 (33%), Positives = 290/568 (51%), Gaps = 62/568 (10%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           M L++PLG +P  +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++ 
Sbjct: 1   MQLAKPLGTNPRQLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVF 60

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
             G  +G +   KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y
Sbjct: 61  EQGRAFGTSEREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFY 120

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSE 220
            NDAG QI  LA+S   R  + L   D+  PE  Y G Y+  + ++      +A K    
Sbjct: 121 YNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEP 179

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           +    +   L  ++ ++V  +      DL+A  ++ D +  E   +      +   +D L
Sbjct: 180 VTGAGDIDDLDAIRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDAL 237

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            + G  YE                    L  R+T  GDD DR + KSDG+YTYF  D+AY
Sbjct: 238 IKAGMTYE----------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAY 281

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPI 398
              K+ERGF  +I + GSDH G + R+ A      +   K   + +L ++V + RDG  +
Sbjct: 282 HVTKWERGFTQVINIQGSDHHGTIARVRAGLQGLRIGIPKGYPDYVLHKMVTVMRDGQEV 341

Query: 399 KMSKRAGDFITLR-----------------HVVDEV----GSDSVRFMMLWRKNSELLDF 437
           K+SKRAG ++T+R                  ++DE     G D+VRF ++ RK      F
Sbjct: 342 KLSKRAGSYVTVRDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVF 401

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D     +Q+ ENPV+YVQYA+AR  S+  + K  + ++D    P   + Q +      + 
Sbjct: 402 DIDLALKQNDENPVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTS--PQAVS 458

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LAEYP ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++     
Sbjct: 459 LMQKLAEYPDMLTHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRN 511

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  L+ A   ++ +GL ++GV +P +M
Sbjct: 512 ARAALLAATRQVLENGLAVLGVSAPAKM 539


>gi|193213680|ref|YP_001999633.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|229558753|sp|B3QLU7|SYR_CHLP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193087157|gb|ACF12433.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 551

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 178/561 (31%), Positives = 288/561 (51%), Gaps = 40/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           I I++P D   G  STN A +L++    +P  +A  ++      +  V    +AG GFIN
Sbjct: 24  IQIDKPNDKKFGDFSTNIAFLLAKEARKNPRELATQLIGLFAFPEGTVTKTEVAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+P++  +    ++  G ++G    GKG K  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FHLAPAFFMRSAQEVLTQGEKFGCTESGKGQKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+   GYEVTREYY NDAG Q+  LA SV +RY +       + PE +Y G Y+  + 
Sbjct: 144 ANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQTVEFPETHYQGDYIGEIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--- 267
             L  ++S EL +  E   L I K+ +   +   IR  L+ + I HD F +E   ++   
Sbjct: 203 GTLFIEHSDELASSDE---LGIFKETAEAVIFSSIRRTLERIGITHDSFFNEHTLYQWNE 259

Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           G+ S  + +ID L  + ++  Y+G                     F +T +G + D+ L+
Sbjct: 260 GEASGNQKVIDALEAKDFIGRYDG------------------ATWFMTTKLGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   K+ERGFD M+ V G+DH   Y   LEA+   +    +++ + 
Sbjct: 302 KSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEAL-KILGYDASKVKIA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V     G  +KMS R G+   L  ++++VG+D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVGGQTVKMSTRKGNADLLDDLIEDVGADATRLFFIMRSKDSHLNFDVELAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QSK+NPVFY+QYA+AR  S+ R A+    ++ FD                E+ L   L +
Sbjct: 421 QSKDNPVFYLQYAHARICSLVRLAE---KEVGFDEAAATGASLPLLDSEPEIDLASALLD 477

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P VI++     EP K+  YL+ +A  +H  +   +E P L+     +  +   RL+L  
Sbjct: 478 FPDVIQSCLRLLEPQKMVEYLHTVAERYHKFY---QECPILK----ADENIRTARLELSL 530

Query: 565 AVASIINSGLNIIGVESPNEM 585
            V  ++ +G  I+G+ +P  M
Sbjct: 531 TVRQVLRNGFRILGISAPESM 551


>gi|315453935|ref|YP_004074205.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132987|emb|CBY83615.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 535

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 179/575 (31%), Positives = 303/575 (52%), Gaps = 53/575 (9%)

Query: 21  KIK-VEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           KIK V +++LD +IV+E P+D + GH ++  A  L++     P  IAE +V  +K +   
Sbjct: 4   KIKGVLERLLDTKIVLEHPKDKSLGHYASVVAFSLAKERRKAPKIIAEELVQFLKQEQVC 63

Query: 79  DSVFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
             VF    A  G++N  L  S+L ++ +  +  G ++GRN++       IEFVSANPTGP
Sbjct: 64  QEVFASISALNGYLNFTLKESFLDELCNQALSLGKDFGRNILESKKSYYIEFVSANPTGP 123

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+GH R A+ GD+L  L  F G +   EYY+ND GAQI+ L LSV+ R Q+ +     +
Sbjct: 124 LHIGHARGAIFGDSLCRLGRFLGVKTHAEYYVNDMGAQIHMLGLSVYLRIQE-MRGAQVE 182

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            P   Y G Y+  + ++  + + +  L   EE  +  + +++ + M+  I++ L    I 
Sbjct: 183 YPPNAYKGDYITELAQKALEHFGA--LEGEEEALIAQLGNFAKELMLAEIQETLAETGIC 240

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D +ISE    +   S    +   L   G VYE                   ++   S+ 
Sbjct: 241 MDAYISE----KAMFSAQERVFTRLQEAGGVYE----------------SEGKMWLASSQ 280

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GD+ DR L KSD ++TY A D+ Y   K+++ +D+ I + G+DH GYV R++A    + 
Sbjct: 281 KGDEKDRVLKKSDSTFTYIAGDITYHDYKFQQNYDHYINIFGADHHGYVARIKAALEFLG 340

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            +  ++ VLL ++V L ++G P KMSKRAG+F+ L+ V+ ++G D++RF+ L +K    L
Sbjct: 341 YESQRLEVLLVQMVALLQEGKPYKMSKRAGNFVLLKDVLQDIGKDALRFVFLSKKLDTHL 400

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFD 492
           +FD   +++Q   NP+FY+ YA AR  ++   +K +    +  ++     N+ P  +   
Sbjct: 401 EFDVASLQKQDSSNPIFYIHYANARIHTLM--SKFLQRGNEQAIYASSLCNLPPVATHLL 458

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQA 550
            S L L       P+V+ +A + +E  K+  YL +LA  FH  ++  R  E P+      
Sbjct: 459 FSALNL-------PKVLVSAFVDRELQKICEYLKNLAGDFHAFYNAHRILETPQ------ 505

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +  L+L   V+  +  GL+++G+E+  +M
Sbjct: 506 -----ELPYLKLCQMVSLSLTIGLSMLGIEAKKKM 535


>gi|86150808|ref|ZP_01069024.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841978|gb|EAQ59224.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 530

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ + + D   +  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A K I   +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|121613183|ref|YP_001000850.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166232774|sp|A1W0F9|SYR_CAMJJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|87249269|gb|EAQ72230.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 530

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ + + D   +  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+ + I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQVKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|332673163|gb|AEE69980.1| arginine--tRNA ligase [Helicobacter pylori 83]
          Length = 541

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 284/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI+ L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIHLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY  R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYTARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|217033390|ref|ZP_03438820.1| hypothetical protein HP9810_1g4 [Helicobacter pylori 98-10]
 gi|216944095|gb|EEC23523.1| hypothetical protein HP9810_1g4 [Helicobacter pylori 98-10]
          Length = 541

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWIAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +    +L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPKLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKICEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|315124642|ref|YP_004066646.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018364|gb|ADT66457.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 530

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 293/566 (51%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ + + D   +  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FKALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|210134514|ref|YP_002300953.1| arginyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238065089|sp|B6JKP5|SYR_HELP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|210132482|gb|ACJ07473.1| arginyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 541

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 282/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +     +G  +   +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKERFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + I+  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEILSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D S T
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSCT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q   +  +  E  L+      P+ +E
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKAVE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            + +   ++G+E   ++S
Sbjct: 521 SLTNAFKLLGIEIKTKIS 538


>gi|218562787|ref|YP_002344566.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81549216|sp|Q9PNC0|SYR_CAMJE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112360493|emb|CAL35290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 530

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 295/566 (52%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIVDLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A K I   +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|208434266|ref|YP_002265932.1| arginyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238065090|sp|B5ZA86|SYR_HELPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|208432195|gb|ACI27066.1| arginyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 541

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 281/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHKKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLGFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIGVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLVKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLTGDVIYHDKKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q      +  E  L+      P+ IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLPKAIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+           T   L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPK-----------TKELLKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            + +   ++G+E   ++S
Sbjct: 521 SLTNAFKLLGIEIKTKIS 538


>gi|88596555|ref|ZP_01099792.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88191396|gb|EAQ95368.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 530

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 295/566 (52%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ + + D   +  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL   N       F+   L+ I
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNLLFEALNLKAI 460

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++ A   R ++         K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|224372504|ref|YP_002606876.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782978|sp|B9L8B8|SYR_NAUPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|223588954|gb|ACM92690.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 532

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 169/511 (33%), Positives = 278/511 (54%), Gaps = 54/511 (10%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCR 142
           A  GF+N+ LS S+L +  + ++     + +   G G  ++ +E++SANPTGP+H+GH R
Sbjct: 67  AVSGFVNITLSDSFLNEFANKVLSEKENFAK---GSGKERILLEYISANPTGPLHIGHAR 123

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            AV GD +A +    GY+V  EYY+NDAG QI  L LSV+   ++ L   D   PE YY 
Sbjct: 124 GAVFGDAIARIGRHIGYDVVTEYYVNDAGRQITLLGLSVYLAAREIL-GLDVKWPEEYYR 182

Query: 203 GVYLKHVGKELADKYSSELL-------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           G Y+K +  E   ++  +         NF ++K     KD     M+ +I++D+KALN+ 
Sbjct: 183 GEYIKDLAAEAIKEFGEDYFKAEIDAENFNDDKLNMWAKD----KMLNLIKEDIKALNVT 238

Query: 256 -HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D ++SE + ++     +R I   L + G +YE                   ++  +S+
Sbjct: 239 PFDNWVSEKELYK-HWDEVRAI---LEKNGALYE----------------KDGKVWLKSS 278

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              D+ DR +++ DG  TY A D+ Y   K++R +D  I + G+DH GY+ R++A    +
Sbjct: 279 EYKDEKDRVVVREDGRPTYLAGDIIYHWDKFKRNYDRYINIWGADHHGYIARVKAAIKFL 338

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ +LL ++V+L + G P KMSKRAG+FI +  VV +VG+D++RF+ L +K    
Sbjct: 339 GFDPEKLEILLSQMVKLLKGGEPYKMSKRAGNFILVSDVVKDVGADALRFVFLTKKADTH 398

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD  ++  Q   NP +Y+ YA+AR +SIFR  +    D         V  Q  +    
Sbjct: 399 LEFDVDELNRQDSSNPAYYINYAHARIKSIFRNKEMNLED--------TVNIQLKDLSKD 450

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+    ++P V+E A I +EP++L  YLY+LAS FH  ++  +       V  + ++
Sbjct: 451 EKDLVFLALQFPYVLEEAFINREPHRLTNYLYELASEFHSFYNKNK-------VIGSEKE 503

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +RL+++  VASII  GL+++G+E+   M
Sbjct: 504 --EVRLKILAVVASIIKLGLSLLGIEAKERM 532


>gi|86150379|ref|ZP_01068605.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839204|gb|EAQ56467.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|284926399|gb|ADC28751.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 530

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 293/566 (51%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ + + D   +  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|108562747|ref|YP_627063.1| arginyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373824|sp|Q1CUI3|SYR_HELPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|107836520|gb|ABF84389.1| arginyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 541

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/558 (29%), Positives = 282/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSIVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S   L +     +    ++G  +   +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDLLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +   +   PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKENVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLTGDIVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q      +  E  L+      P+ IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSTLSLPKAIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            + +   ++G+E   ++S
Sbjct: 521 SLTNAFKLLGIEIKTKIS 538


>gi|315586310|gb|ADU40691.1| arginine--tRNA ligase [Helicobacter pylori 35A]
          Length = 541

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|157415439|ref|YP_001482695.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047154|sp|A8FMN1|SYR_CAMJ8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157386403|gb|ABV52718.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748081|gb|ADN91351.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932319|gb|EFV11262.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 530

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 296/566 (52%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFTLENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALAN-----PNDFSKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLILIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  V+DE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVIDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL   N       F+   L+ I
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMRADLQSLNQDGVNLLFEALNLKAI 460

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++ A   R ++         K+  YL +LA+ FH  ++   EN  +  +  N+       
Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSINEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|295104373|emb|CBL01917.1| arginyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 604

 Score =  273 bits (699), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 191/580 (32%), Positives = 297/580 (51%), Gaps = 41/580 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83
           L   ++E P D  +G +++N AM  +R     P  IA+ ++A +   P ++ SVF    +
Sbjct: 43  LPAFIVEIPADVKNGDIASNLAMAGARTWRKAPKMIADALLAHL---PSLENSVFSKVEV 99

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL+LS S+   ++     +  EYGR   GKG K N+EFVSANPTGPMH+G+ R 
Sbjct: 100 AGPGFINLFLSQSFWAGVVLG-ACANKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202
             +GD LA+++ +SGY+VTRE+YINDAG QI     S+  RY Q     D+  LP+  Y 
Sbjct: 159 GALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEDAYPLPKECYQ 218

Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249
           G  +K +  E A    DKY +      EE     +    +KD    Y++   +  ++ DL
Sbjct: 219 GGDIKVLAGEFAELNGDKYVAACSGLSEEALFESEAFAALKDALVAYALPKNIAALKRDL 278

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306
               I +D++  E   H  +   +  ++D L   G  Y   +G +    ++   K     
Sbjct: 279 GKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 336

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           K+     T   +  D  L++++G  TYFAAD+AY   K   RGF   I V G+DH G+V 
Sbjct: 337 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  DS RF+
Sbjct: 396 RMKGAMDAIGLHGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    +DFD  +  +   +NPV+YVQYA+AR  SI ++ +               I
Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKME----SEGVQFAGAEHI 511

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  + + R     
Sbjct: 512 DATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR----- 566

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +Q  +  +   RL L   V ++I + L +  +  P +M
Sbjct: 567 --IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604


>gi|261839171|gb|ACX98936.1| arginyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 541

 Score =  273 bits (699), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 284/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEKFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTHLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKICEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|86153085|ref|ZP_01071290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843970|gb|EAQ61180.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 530

 Score =  273 bits (699), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 295/566 (52%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKGLKKSPMLIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFAKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL   N       F+   L+ I
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKTDDVMKADLQSLNQDGVNLLFEALNLKAI 460

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++ A   R ++         K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|256384218|gb|ACU78788.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385050|gb|ACU79619.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455934|gb|ADH22169.1| arginine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 554

 Score =  273 bits (699), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 185/584 (31%), Positives = 309/584 (52%), Gaps = 51/584 (8%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N LK I  K+ + K+     +IE  ++   G LS++  +I S+ +   PL +AE+    +
Sbjct: 11  NDLKNICQKLNITKEP----IIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +     ++ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKII 245
           D+  PE  Y G   + + K + +KY+ +   + + + K L      + K  S+   +KII
Sbjct: 185 DAKKPENCYAGDMYEDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++        +YE      K     K D  
Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLK-------LYES-----KDALYYKDDA- 289

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364
              L  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 290 ---LFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPR 482
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QA  K I P         
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTKKITP--------- 457

Query: 483 NVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +I Q +  +   E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++    
Sbjct: 458 -LIKQTNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA---- 512

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++ +  N+ +LT +RL  + A+  ++ +   IIG++   EM
Sbjct: 513 --EIKIIDENDLQLTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554


>gi|313115112|ref|ZP_07800599.1| arginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622552|gb|EFQ06020.1| arginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 604

 Score =  273 bits (699), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 299/580 (51%), Gaps = 41/580 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83
           L   ++E P D  +G +++N AM  +R     P  IA+ ++A +   P ++ SVF    +
Sbjct: 43  LPAFIVEIPADTKNGDIASNIAMAGARSWRKAPKMIADALLAHL---PSIENSVFAKVEV 99

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL+L+PS+   ++     S  EYGR   GKG K N+EFVSANPTGPMH+G+ R 
Sbjct: 100 AGPGFINLFLAPSFWASVVLG-ACSNKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202
             +GD L++++ +SGY+VTRE+YINDAG QI     S+  RY Q     ++  LP   Y 
Sbjct: 159 GALGDCLSAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQKYCGEEAYPLPAECYQ 218

Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249
           G  +K +  E A    DKY +      EE     +    +KD    Y++   +  ++ DL
Sbjct: 219 GGDIKVLAGEFAELNGDKYVAACKGMDEETLFESEAFAALKDALVAYALPKNIAALKRDL 278

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306
               I +D++  E   H  +   ++ ++D L   G  Y   +G +    ++   K     
Sbjct: 279 GKYRIDYDVWFHESTLH--ESGAVKAVVDKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 336

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           K+     T   +  D  L++++G  TYFAAD+AY   K   RGF   I V G+DH G+V 
Sbjct: 337 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  DS RF+
Sbjct: 396 RMKGAMDAIGLNGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    +DFD  +  +   +NPV+YVQYA+AR  SI ++ +     + F    +  +
Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMES--EGVQFAGAEK--V 511

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  +   R     
Sbjct: 512 DATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGSCR----- 566

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +Q  +  +   RL L   V + I + L +  +  P +M
Sbjct: 567 --IQGADPAVQQARLALCIGVKNAIFNVLTMFKINVPEKM 604


>gi|317177134|dbj|BAJ54923.1| arginyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 541

 Score =  273 bits (699), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +     +G      +  K+ +EFVSANPTGP+H+GH R A+ GD+LA 
Sbjct: 82  SLDFLERFTQKALELKERFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAMFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWIAYREHVLKESVTYPEVFYKGEYIIEIAKQ 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKICEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|297379539|gb|ADI34426.1| arginyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 541

 Score =  273 bits (697), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 164/558 (29%), Positives = 282/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K 
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKR 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+ + +     + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFRQNYTKYTNIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|317012159|gb|ADU82767.1| arginyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 541

 Score =  273 bits (697), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHKKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLGRFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            ++     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ASNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLTGDVVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q      +  E  L+      P+ IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLPKAIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|42561129|ref|NP_975580.1| arginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81400554|sp|Q6MT14|SYR_MYCMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42492626|emb|CAE77222.1| arginine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320483|gb|ADK69126.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 554

 Score =  272 bits (696), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 183/585 (31%), Positives = 306/585 (52%), Gaps = 53/585 (9%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N LK I  K+ + K+     +IE  ++   G LS++  +I S+ +   PL +AE+    +
Sbjct: 11  NDLKNICQKLNITKEP----IIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +     ++ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKII 245
           D+  PE  Y G     + K + +KY+ +   + + + K L      + K  S+   +K+I
Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNYQFKDIKYTDNKILDYNVHSLFKQISIDYFLKVI 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++        +YE      K     K D  
Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLK-------LYES-----KDALYYKDDA- 289

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364
              L  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 290 ---LFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QA+            + +
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAR-----------TKKI 455

Query: 485 IPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            P   E +      E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++   
Sbjct: 456 TPLVKETNLLNNPKEIELLLVLDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA--- 512

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++ +  NN +LT +RL  + AV  ++ +   IIG++   EM
Sbjct: 513 ---EIKIIDENNLQLTKLRLGFIKAVLQVLENAFFIIGIQPVLEM 554


>gi|580993|emb|CAA38537.1| argS [Corynebacterium glutamicum]
          Length = 517

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 182/553 (32%), Positives = 290/553 (52%), Gaps = 37/553 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  +TN A+ +++ +G +P  +A  +   +  D  +DS  IAG GF+N+ L
Sbjct: 1   MERPRNPEHGDYATNIALQVAKKVGQNPRDLATWLAEALAADDAIDSAEIAGPGFLNIRL 60

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + +   +I++ I+  G  +G +       VN+EFVSANPTGP+H+G  R A VGD+L  +
Sbjct: 61  AAAAQGEIVAKILAQGETFGNSDHLSHLDVNLEFVSANPTGPIHLGGTRWAAVGDSLGRV 120

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  SG +VTREYY ND G QI+  ALS+    +          PE  Y G Y+K + + +
Sbjct: 121 LEASGAKVTREYYFNDHGRQIDRFALSLLAAAK------GEPTPEDGYGGEYIKEIAEAI 174

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K+  E L         + +   V+ M + I+  L       D++  E+     +   +
Sbjct: 175 VEKHP-EALALEPAATQELFRAEGVEMMFEHIKSSLHEFGTDFDVYYHENSLF--ESGAV 231

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              +  L   G +YE                +      RST  GDD DR ++KSDG   Y
Sbjct: 232 DKAVQVLKDNGNLYE----------------NEGAWWLRSTEFGDDKDRVVIKSDGDAAY 275

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            A D+AY   K+ RG +  IY++G+DH GY+ RL+A AAA+  K   + VL+ ++V L R
Sbjct: 276 IAGDIAYVADKFSRGHNLNIYMLGADHHGYIARLKAAAAALGYKPEGVEVLIGQMVNLLR 335

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG  ++MSKRAG  +TL  +V+ +G D+ R+ ++       LD D    + QS +NPV+Y
Sbjct: 336 DGKAVRMSKRAGTVVTLDDLVEAIGIDAARYSLIRSSVDSSLDIDLGLWESQSSDNPVYY 395

Query: 454 VQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           VQY +AR  SI R+A+ +   +   DL   +++  + E D     LI  L E+P V++ A
Sbjct: 396 VQYGHARLCSIARKAETLGVTEEGADL---SLLTHDREGD-----LIRTLGEFPAVVKAA 447

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              +EP+++A Y  +LA  FH  +      P+   V  +   +   RL L  A    + +
Sbjct: 448 ADLREPHRIARYAEELAGTFHRFYDSCHILPK---VDEDTAPIHTARLALAAATRQTLAN 504

Query: 573 GLNIIGVESPNEM 585
            L+++GV +P +M
Sbjct: 505 ALHLVGVSAPEKM 517


>gi|331703585|ref|YP_004400272.1| arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802140|emb|CBW54294.1| Arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 554

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 185/584 (31%), Positives = 308/584 (52%), Gaps = 51/584 (8%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N LK I  K+ + K+     +IE  ++   G LS++  +I S+ +   PL +AE+    +
Sbjct: 11  NDLKNICQKLNITKEP----IIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +     ++ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKII 245
           D+  PE  Y G     + K + +KY+ +   + + + K L      + K  S+   +KII
Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++        +YE      K     K D  
Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLK-------LYES-----KDALYYKDDA- 289

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364
              L  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 290 ---LFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDLDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPR 482
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QA  K I P         
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTKKITP--------- 457

Query: 483 NVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +I Q +  +   E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++    
Sbjct: 458 -LIKQTNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA---- 512

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++ +  N+ +LT +RL  + A+  ++ +   IIG++   EM
Sbjct: 513 --EIKIIDENDLQLTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554


>gi|261837760|gb|ACX97526.1| arginyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 541

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     P  IAE +  +I        +F    A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPSVIAEELALKISTHEKTQGLFDSVAACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G  +   +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNILKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  I Q   +  +  E  L+      P++IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+    P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            +++   ++G+E   ++S
Sbjct: 521 SLSNAFKLLGIEIKTKIS 538


>gi|160944624|ref|ZP_02091851.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443808|gb|EDP20812.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii
           M21/2]
          Length = 616

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 191/580 (32%), Positives = 296/580 (51%), Gaps = 41/580 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83
           L   ++E P D  +G +++N AM  +R     P  IA+ ++A +   P ++ SVF    +
Sbjct: 55  LPAFIVEIPADVKNGDIASNLAMAGARTWRKAPKMIADALLAHL---PSLENSVFSKVEV 111

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL+LS S+   ++     +  EYGR   GKG K N+EFVSANPTGPMH+G+ R 
Sbjct: 112 AGPGFINLFLSQSFWAGVVLG-ACANKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 170

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202
             +GD LA+++ +SGY+VTRE+YINDAG QI     S+  RY Q     D+  LP+  Y 
Sbjct: 171 GALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEDAYPLPKECYQ 230

Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249
           G  +K +  E A    DKY +      EE     +    +KD    Y++   +  ++ DL
Sbjct: 231 GGDIKVLAGEFAELNGDKYVAACKGMDEEALFESEAFAALKDALVAYALPKNIAALKRDL 290

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306
               I +D++  E   H  +   +  ++D L   G  Y   +G +    ++   K     
Sbjct: 291 GKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 348

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           K+     T   +  D  L++++G  TYFAAD+AY   K   RGF   I V G+DH G+V 
Sbjct: 349 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 407

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  DS RF+
Sbjct: 408 RMKGAMDAIGLNGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 467

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    +DFD  +  +   +NPV+YVQYA+AR  SI ++ +               I
Sbjct: 468 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKME----SEGVQFAGAEHI 523

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  + + R     
Sbjct: 524 DATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR----- 578

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +Q  +  +   RL L   V + I + L +  +  P +M
Sbjct: 579 --IQGADPAVQQARLALCIGVKNAIFNVLTMFKINVPEKM 616


>gi|57238047|ref|YP_179296.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81353486|sp|Q5HTT9|SYR_CAMJR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57166851|gb|AAW35630.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058607|gb|ADT72936.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 530

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F +E  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSQEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VV+E+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|21672856|ref|NP_660921.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222754|sp|Q8KGF3|SYR_CHLTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21645905|gb|AAM71263.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 551

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 183/563 (32%), Positives = 293/563 (52%), Gaps = 44/563 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           I I++P D   G  STN A ++++    +P  +A  ++  +   +  V    +AG GFIN
Sbjct: 24  IQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDFPEGTVTKTEVAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+P++  +    ++  G  +G N  GKG K  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+   GYEVTREYY NDAG Q+  LA SV +RY +       + PE +Y G Y+  + 
Sbjct: 144 ANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQVIEFPETHYQGDYIGEIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--- 267
           + L  ++   L    E   L I K+ +   +   IR  L+ L I HD F +E   ++   
Sbjct: 203 ETLFIEHGDGLAATDE---LTIFKEAAEAVIFSSIRKTLERLLITHDSFFNEHTLYQSRE 259

Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           G PS  + +ID L  +G++  Y+G                     F +T +G + D+ L+
Sbjct: 260 GQPSANQRVIDALDAKGFIGNYDG------------------ATWFMTTKLGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   K+ERGFD M+ V G+DH   Y   LEA+   +    +++ + 
Sbjct: 302 KSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEAL-KILGYDTSKVKIA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V     G  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHL 502
           QSK+NPVFY+QYA+AR  S+ R A+    ++ FD      I       +S  E+ L   L
Sbjct: 421 QSKDNPVFYLQYAHARICSLVRMAEK---EVGFD--EATAIGAGLPLLSSEPEIDLASAL 475

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++P +I+++    EP K+  YL+ +A  +H  +   +E P L+     +  L   RL+L
Sbjct: 476 LDFPDIIQSSLRQLEPQKMVEYLHTVAERYHKFY---QECPILK----ADEHLRTARLEL 528

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV  ++ +G  I+G+ +P  M
Sbjct: 529 SLAVRQVLRNGFKILGISAPESM 551


>gi|295100375|emb|CBK97920.1| arginyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 604

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 191/586 (32%), Positives = 298/586 (50%), Gaps = 53/586 (9%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS-----VFI 83
           L   ++E P D  +G +++N AM  +R     P  IA+ ++A +   P +D      V +
Sbjct: 43  LPAFIVEIPADVKNGDIASNIAMAGARTWRKAPKMIADALIAHL---PALDGGVFAKVEV 99

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL+L+PS+   ++     S  EYGR   GKG K N+EFVSANPTGPMH+G+ R 
Sbjct: 100 AGPGFINLFLAPSFWAGVVLG-ACSNKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202
             +GD LA+++ +SG +VTRE+YINDAG QI     S+  RY Q     ++  LP   Y 
Sbjct: 159 GALGDCLAAVLDWSGCDVTREFYINDAGNQIQKFGKSLAVRYLQKYCGEEAYPLPAECYQ 218

Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249
           G  +K +  E A    DKY++      EE     +    +KD    Y++   +  ++ DL
Sbjct: 219 GGDIKVLAGEFAELNGDKYAASCKGMDEETLFESEAFAALKDALVAYALPKNIAALKRDL 278

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306
               I +D++  E   H  +   +  ++D L   G  Y   +G +    ++   K     
Sbjct: 279 SKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAVMYRSAQYAAKYGTVN 336

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           K+     T   +  D  L++++G  TYFAAD+AY   K   RGF   I V G+DH G+V 
Sbjct: 337 KKKTDDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  DS RF+
Sbjct: 396 RMKGAMDAIGLHGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFP---DLDFDL 479
                    +DFD  +  +   +NPV+YVQYA+AR  SI ++ +     F    ++D  L
Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEGVAFAGAENIDATL 515

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  +   
Sbjct: 516 LT----------EPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGSC 565

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       +Q  +  +   RL L   V ++I + L +  +  P +M
Sbjct: 566 R-------IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604


>gi|239617808|ref|YP_002941130.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506639|gb|ACR80126.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 542

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 186/546 (34%), Positives = 277/546 (50%), Gaps = 41/546 (7%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G  STN A +L++ L   P  IAE +  R      V  V +AG GFIN  L+ S  RK L
Sbjct: 35  GDYSTNVAFLLTKKLRKSPKMIAEELSGRFSELEYVLKVTVAGPGFINFVLNDSIYRKSL 94

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             IV +   + +      T +  EF SANPTGP  +GH R  + GD L ++    GY V 
Sbjct: 95  FHIVDNPRFWEKE---GDTLIQFEFGSANPTGPYTIGHGRQLIFGDVLCNVFQARGYRVH 151

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           RE YINDAG QI  L  S++ RY + L+  + +LPE  Y G YL  + +EL   Y    +
Sbjct: 152 REMYINDAGRQIKLLGRSLWVRYNE-LFGKEYELPEDGYRGEYLIDLAEELKISYGDRFV 210

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +  + +     K Y+V  +M+ +++ L+ L +  D + SE      D   + +I+     
Sbjct: 211 DRWDSEIEEFFKSYAVGKIMEGMKESLERLGMSFDNYFSEKSLV--DDGSVEEILRKFDE 268

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            G  Y                  RK   L F  +   DD D+ L++SDG+YTYF  D+AY
Sbjct: 269 MGLTY------------------RKDGALWFAVSKFVDDDDKVLVRSDGTYTYFLTDIAY 310

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              KY+RG+     + G+DH G++ R+ A   A+      +  ++ + V + R G  IKM
Sbjct: 311 HYNKYKRGYRRAYDIWGADHMGHIPRMRAAMKALGIADDFLYFIIHQYVNIKRGGEVIKM 370

Query: 401 SKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           S R G F TL  +V+ VG D+ R F  ++  ++ +L FD    K+++ ENPVFYVQYA+A
Sbjct: 371 STRKGQFSTLDELVESVGKDATRYFFAMFDPDTHML-FDIDLAKKKNNENPVFYVQYAHA 429

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SIFR A      LD        IP E   +  E +LI  L  +P +++  T   +  
Sbjct: 430 RIASIFRTASQRGMKLD------TRIP-EVLMNEEEKRLIKQLGNFPEILDQITEDYKTN 482

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L  YL  LA  FH  ++      +   V A++ +L+M RL L  AV ++++ GL++IGV
Sbjct: 483 RLTNYLESLAGAFHAFYN------KHVVVDADSPELSMFRLTLCKAVKNVLSDGLSLIGV 536

Query: 580 ESPNEM 585
            +P  M
Sbjct: 537 SAPESM 542


>gi|313665274|ref|YP_004047145.1| arginine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949800|gb|ADR24396.1| arginine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 554

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 181/563 (32%), Positives = 298/563 (52%), Gaps = 45/563 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE  ++   G LS++  +I S+ +   PL +A     ++ +  +  S+ IA  GF+N+ 
Sbjct: 27  IIEINKNNTPGLLSSSICLISSKQVNKKPLDLANDFKEQLLLTNNYSSIQIASPGFLNVL 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P  L  ++++++    +YG NL  +   +NIE+VSANPTG +HVGH R AV+G  L +
Sbjct: 87  VKPEILSSVINNVLSLKSKYG-NLEKQNKTINIEYVSANPTGYLHVGHARNAVIGSVLVN 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L   +GY+V  EYY+NDAG QIN LA++VF  Y QAL N D+  PE  Y G     + K 
Sbjct: 146 LFKKAGYKVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NIDAKKPENCYAGDMYDDLAKI 204

Query: 213 LADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           + +KY+ +   +N+ + K L      + K  S+   +KII+  L   N++   + SE + 
Sbjct: 205 IINKYNDQFKDINYTDNKILDDYVHSLFKQISIDYFLKIIKQQLADFNVKIRHWSSEQEV 264

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  D   I              E +L   KSK           +  ++T  GDD DR L+
Sbjct: 265 Y--DTHQI--------------EKVLKLYKSKDATY--YKDGAVFLKTTQFGDDKDRVLV 306

Query: 326 KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSD +YTY   DLA    + +R   D +I V G DH GY+KR++A  A +      + + 
Sbjct: 307 KSDKTYTYILPDLATHHLRIKRTKADKLINVWGGDHHGYIKRMQAGLALLGNDPDILEIQ 366

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++VRL ++G   KMSKR G  + L  +++ VG D++R+M+  + ++  +D D   +  
Sbjct: 367 MVQMVRLIKNGSEYKMSKRKGTAVWLVDILELVGVDALRYMLASKSSNSHMDLDLDLITL 426

Query: 445 QSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           ++  NPV+Y QYA ARC SI  QA  K I P +       N  P+E+E       L++ L
Sbjct: 427 KNSSNPVYYAQYATARCHSILNQAKTKKITPLVKETNLLNN--PKETE-------LLLVL 477

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +  VI+N+   +   ++  Y+ ++  +FH +++       ++ +  NN +LT +RL  
Sbjct: 478 DNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------EIKIIDENNLQLTKLRLGF 531

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + AV  ++ +   IIG+E   EM
Sbjct: 532 IKAVLQVLKNAFFIIGIEPVIEM 554


>gi|145590156|ref|YP_001156753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048562|gb|ABP35189.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 575

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 198/586 (33%), Positives = 294/586 (50%), Gaps = 78/586 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89
           +ERP+   HG ++ N A+ LS+P  L+P  +A+ +V  ++  P     + S  IAG GFI
Sbjct: 34  LERPKAVDHGDVACNIALQLSKPWKLNPRELAQSLVEHLQKQPGYGELIASCEIAGPGFI 93

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN--IEFVSANPTGPMHVGHCRCAVVG 147
           N  LS +    ++S I+ SG  +G+     G   +  IEFVSANPTGP+HVGH R A +G
Sbjct: 94  NFRLSNAAKTAVVSEILGSGTHFGQLTPASGPAASAMIEFVSANPTGPLHVGHGRQAALG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA+L+A  G +V RE+Y NDAG QI  LALSV  R  Q     D   PE  Y G Y+ 
Sbjct: 154 DALANLLATQGTKVHREFYYNDAGVQIANLALSVQARL-QGFKPGDPQWPEQAYNGEYIA 212

Query: 208 HVGK--ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
            +    +++  Y  +         L  ++ ++V  +      DLK   +Q D +  E   
Sbjct: 213 EIAAAFKVSPDYKDD---------LEAIRKFAVTYLRNEQDIDLKTFGVQFDCYYLESSL 263

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      +  I+ +L   G  YE                    L  ++T  GDD DR + 
Sbjct: 264 Y--TDGSVAQIVQDLQSIGKTYEA----------------EGALWLKTTDDGDDKDRVMR 305

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK------KA 379
           KSDGS+TYF  D+AY   K+ RGF  +I V GSDH G + R+ +    V++K      K 
Sbjct: 306 KSDGSFTYFVPDVAYHASKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKT 365

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------EVGSDS 421
             + +L ++V + R G  +K+SKRAG ++T+R +V+                  + G D+
Sbjct: 366 YPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDLVEWSGGVTSEMTPEERELALQRGRDA 425

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRF ++ RK      FD     +Q+ ENPVFYVQYA+AR  SI          L +D  P
Sbjct: 426 VRFFLISRKADTEFVFDIDLALQQNDENPVFYVQYAHARISSIL---------LQWDGKP 476

Query: 482 RNVIPQESEFDTSEL--QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            ++   +     S+    L+  LAEYP V+ +A     P+ LAFYL DLA  FH  ++  
Sbjct: 477 SDLAGADLSLLQSKASDHLLRRLAEYPEVLTDAAAELAPHALAFYLRDLAGDFHTFYNAD 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V  ++  L + RL L+ A   ++ +GL ++GV +P +M
Sbjct: 537 R-------VLIDDPALKLARLALLSATRQVLQNGLRVLGVSAPAKM 575


>gi|148926180|ref|ZP_01809865.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845351|gb|EDK22444.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 530

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 172/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE Y
Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +Y+                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYK----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VV+E+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL            +   + L+
Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                   V+ +A  A+   K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|315930154|gb|EFV09278.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 548

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 172/561 (30%), Positives = 295/561 (52%), Gaps = 45/561 (8%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ + + D   +  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +   NPV+Y+ YA+AR   +F +A K I   +  DL   N       F+   L+ I++ A
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNLLFEALNLKAILNDA 464

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
              R ++         K+  YL +LA+ FH  ++   EN  +     N+       L+L 
Sbjct: 465 FEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------LLKLF 506

Query: 564 HAVASIINSGLNIIGVESPNE 584
             VA  I +  +++G+E+ N+
Sbjct: 507 SLVALSIKTAFSLMGIEAKNK 527


>gi|217031544|ref|ZP_03437049.1| hypothetical protein HPB128_21g102 [Helicobacter pylori B128]
 gi|298736737|ref|YP_003729267.1| arginyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946744|gb|EEC25340.1| hypothetical protein HPB128_21g102 [Helicobacter pylori B128]
 gi|298355931|emb|CBI66803.1| arginyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 541

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 281/558 (50%), Gaps = 49/558 (8%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +     +G     + + K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKERFGSQPKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHKYA- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  RS++  D+ DR L+K D S T
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLRSSLYQDESDRVLIKEDKSCT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510
           Y+ YA +R  ++  ++           F +  + Q   +  +  E  L+      P+ IE
Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKAIE 471

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       K+  Y   LAS FH  ++ G+  + P+ + +           L++   V+ 
Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520

Query: 569 IINSGLNIIGVESPNEMS 586
            + +   ++G+E   ++S
Sbjct: 521 SLTNAFKLLGIEIKTKIS 538


>gi|224436874|ref|ZP_03657863.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143352|ref|ZP_07805545.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128383|gb|EFR46000.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 534

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 166/507 (32%), Positives = 271/507 (53%), Gaps = 31/507 (6%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
            IV+E+P++   GHL+T  A  L++    +P  +AE +   +  +P    V  A  GFIN
Sbjct: 20  EIVLEKPKNKDLGHLATPLAFSLAKIKRQNPKLLAEELSVSLAQNPAFSKV-EALNGFIN 78

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L LS  +L  I S    +  +  +N       + +EFVSANPTGP+H+GH R AV GD L
Sbjct: 79  LTLSADFLFDI-SKAESTAPQSKQN----KESILLEFVSANPTGPLHIGHARGAVYGDVL 133

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           + +    GYE+T EYYINDAG+QI  L LS+    Q+ +   +   PE YY G Y+  + 
Sbjct: 134 SRVGRHLGYEITTEYYINDAGSQIQMLGLSLLLAGQEHILKREVKYPESYYRGEYIVDLA 193

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KE    +   +  F  E  +P + D+   AM++ I+D+L  + I  D F+SE   +    
Sbjct: 194 KECEKHFGKSI--FESEDSIPALADFGKNAMLQEIKDNLLQVGISFDNFVSEKALYERWN 251

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S ++ +  N         GI        TQ       ++   S+ + D+ DR +++  G 
Sbjct: 252 STLQTLKQN--------NGIY-------TQDS-----KVWIASSKLNDEKDRVIVRESGE 291

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY A D+ Y + K++RGF+  I + G+DH GY++R++A    +   + ++ VLL ++V 
Sbjct: 292 PTYLAGDIIYHQDKFQRGFERYINIWGADHHGYIQRVKAAIHFLGYDENKLEVLLSQMVS 351

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L + G P KMSKRAG+FI ++ V  E+GSD++RF+ L +K    L+FD  ++K+Q   NP
Sbjct: 352 LLKGGQPYKMSKRAGNFILMKDVASEIGSDALRFIFLSKKPDTHLEFDVDELKKQDSSNP 411

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           ++Y+ YA AR  ++F +A     DL+ ++     +  +S    S   L+        ++E
Sbjct: 412 IYYINYANARIHTLFEKAGVNMQDLEKNI---QSLSFDSHIKDSATHLLFESLCLSHILE 468

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWS 537
           ++   +E  K+  YL +LA+  H  ++
Sbjct: 469 SSFRDREMQKICEYLKNLAASLHSFYN 495


>gi|157165706|ref|YP_001467379.1| arginyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166232770|sp|A7ZF21|SYR_CAMC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112801951|gb|EAT99295.1| arginyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 527

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/570 (30%), Positives = 300/570 (52%), Gaps = 51/570 (8%)

Query: 21  KIKVE-KKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           K+K E  K+L+R  V+E+P+D    H +T     L++ L   P  IA     +      V
Sbjct: 4   KVKAEISKVLEREFVLEKPKDKNLAHYAT-PLFSLAKELRKSPAMIASEFADKFSDSKIV 62

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           ++   A  G++N  L   +L +I   I++    + +    K + + IE++SANPTGP+H+
Sbjct: 63  EAS--AVNGYLNFKLKSEFLDEISKQILLDSENFAKEDAKKDSYL-IEYISANPTGPLHI 119

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R AV GDTLA L    GY ++ EYYINDAG QI+ L  S+    ++ L+N     PE
Sbjct: 120 GHVRGAVYGDTLARLGKRLGYAISTEYYINDAGNQIDLLGTSISLAAKEQLFNESVVYPE 179

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            YY G Y+  + K   +K+  E+  + E + L +  ++    +++II+ DL  + I    
Sbjct: 180 KYYRGDYILDIAKLANEKFGKEIF-YDESRNLELA-EFGKDIVLEIIKKDLADVGI---- 233

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMV 316
                             I++ A +  +Y+G L P  +K  +   M  K+      ST +
Sbjct: 234 -----------------FIESWASEKALYDG-LEPTINKLKRSNQMYEKEGATYIASTTL 275

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR ++++DG  TY A D+ Y   K+E+ FD+ I + G+DH GY+ RL+A    +  
Sbjct: 276 GDDNDRVVVRNDGRPTYLAGDIIYHNAKFEKNFDHYINIWGADHHGYIARLKAAINFLGY 335

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            + ++ V+L ++V L ++G P KMSKRAG+ + +  +  E+G++++RF+ + + N+  L+
Sbjct: 336 DENRLEVILMQMVSLLKEGKPYKMSKRAGNAVLMSDIASEIGAEALRFIFISKANTSSLE 395

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTSE 495
           FD  ++K++   NP+FY+ YA+AR   IF +A     D         VI  + E  D + 
Sbjct: 396 FDVDELKKEDSSNPIFYINYAHARINQIFAKAGKSVSD---------VINADFECLDENS 446

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+      P ++E+A  +++  K+  YL  LA+ FH  ++  R       V  N  + 
Sbjct: 447 KNLLFEALILPEILEDAFASRQLQKIPDYLKSLAASFHKFYNENR-------VVGNENED 499

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++++  V AV+  I +  NI+G+ + + M
Sbjct: 500 SLLKVFAVVAVS--IKTAFNIMGITAKDRM 527


>gi|283954731|ref|ZP_06372248.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793784|gb|EFC32536.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 530

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 292/562 (51%), Gaps = 45/562 (8%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KK+L+    +E P+D    H +T  A  L++ L   P+ IA  +  + + + D   V  A
Sbjct: 10  KKVLECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIANDLANKFQ-NHDCFEVVEA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  +++  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANKALINPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARSA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + P+ YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILSENVEYPDQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E   F  E  +P + D++   M+ +I+ +L+ + I+ D + SE  
Sbjct: 188 YIADLAKEAFEKFGKE---FFSENNIPSLADWAKDKMLVLIKQNLEQVKIKIDTYASERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   + +L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DTLNATLKSLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMGFLGFNPDNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +   NPV+Y+ YA+AR   IF +A     D +  DL   N       F+   L+ I++ A
Sbjct: 405 EDSSNPVYYINYAHARIHQIFVKAGKKIDDVIGADLQSLNQDGVNLLFEALNLKAILNDA 464

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
              R ++         K+  YL +LA+ FH  ++  +         AN   L    L+L 
Sbjct: 465 FEARALQ---------KIPDYLKNLAANFHKFYNENK-----VVGSANEDDL----LKLF 506

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  + +  +++G+E+ N+M
Sbjct: 507 SLVALSVKTAFSLMGIEAKNKM 528


>gi|153952342|ref|YP_001397729.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166232773|sp|A7H2J9|SYR_CAMJD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152939788|gb|ABS44529.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 530

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 295/566 (52%), Gaps = 53/566 (9%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMFIASDLASKFQNHDCFESV-EA 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140
             G++N  +S ++L ++ +  + +      N   KG K      +E+VSANPTGP+H+GH
Sbjct: 69  VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV G+TL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE Y
Sbjct: 124 ARGAVFGNTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + KE  +K+  E   F EE  +P + D++   M+ +I+ +L+   I+ D ++
Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE  ++      +   +++L     +YE                   ++   S+  GD+ 
Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      
Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD  
Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSAVVDEIGSDALRYIFLSKKCDTHLEFDIS 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499
            ++++   NPV+Y+ YA+AR   +F +A     D +  DL   N       F+   L+ I
Sbjct: 401 DLQKEDSSNPVYYINYAHARIYQVFAKAGKKIDDVMGADLQSLNQDGINLLFEALNLKAI 460

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++ A   R ++         K+  YL +LA+ FH  ++   EN  +     N+       
Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  I +  +++G+E+ N+M
Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528


>gi|83319739|ref|YP_424360.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|109895004|sp|Q2SSA3|SYR_MYCCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83283625|gb|ABC01557.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 554

 Score =  270 bits (690), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 178/565 (31%), Positives = 298/565 (52%), Gaps = 49/565 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE  ++   G LS++  +I S+ +   PL +A     ++ +  +  S+ IA  GF+N+ 
Sbjct: 27  IIEINKNNTPGLLSSSICLISSKQVNKKPLDLANDFKEQLLLTNNYSSIQIANPGFLNVL 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P  L  ++S+++    +YG NL  +   +NIE+VSANPTG +HVGH R AV+G  L +
Sbjct: 87  VKPEILSNVISNVLTLKSKYG-NLEKQNKIINIEYVSANPTGYLHVGHARNAVIGSVLVN 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L   +GY+V  EYY+NDAG QIN LA++VF  Y QAL N D+  PE  Y G     + K 
Sbjct: 146 LFKKAGYKVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NIDAKKPENCYAGEMYDDLAKI 204

Query: 213 LADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           + +KY+ +   + + + K L      + K  S+   +KII+  L   N++   + SE + 
Sbjct: 205 IINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKIIKQQLADFNVKIRHWSSEQEV 264

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  D   I              E +L   KSK       D  + L ++T  GDD DR L+
Sbjct: 265 Y--DTHQI--------------EKVLKLYKSKDASYYK-DGAEFL-KTTQFGDDKDRVLV 306

Query: 326 KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSD +YTY   DLA    + +R   D +I V G DH GY+KR++A  A +      + + 
Sbjct: 307 KSDKTYTYILPDLATHHLRIKRTKADKLINVWGGDHHGYIKRMQAGLALLGNDPDILEIQ 366

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++VRL +DG   KMSKR G  + L  +++ VG D++R+M+  + ++  +D D   +  
Sbjct: 367 MVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRYMLASKSSNSHMDLDLDLITL 426

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIV 500
           ++  NP++Y QYA ARC SI  QAK            + + P   E +      E++L++
Sbjct: 427 KNSSNPIYYAQYATARCHSILNQAK-----------IKKITPLVKETNLLNNPKEIELLL 475

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +  VI+N+   +   ++  Y+ ++  +FH +++       ++ +  NN +LT +RL
Sbjct: 476 ILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------EIKIIDENNLELTKLRL 529

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
             + A+  ++ +   IIG++   EM
Sbjct: 530 GFIKAILQVLKNAFFIIGIQPVVEM 554


>gi|268679054|ref|YP_003303485.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617085|gb|ACZ11450.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 528

 Score =  270 bits (690), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 171/565 (30%), Positives = 301/565 (53%), Gaps = 48/565 (8%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           +++K+    V+E+P + + GH +T  A  L++ L   P+ IAE I +    + D+     
Sbjct: 9   IKEKLQREFVLEKPANLSFGHYATPIAFSLAKELKKSPIAIAEEICSSFDTN-DIFQEVT 67

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
             KG+IN  LS  +L +  +  + +  ++G++   +   + +E+VSANPTGP+H+GH R 
Sbjct: 68  PIKGYINFKLSERFLDQYATWAIQNEEQFGQD--EQHETILLEYVSANPTGPLHIGHARG 125

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV+GD LA +    GY++T EYY+NDAG Q++ L LS++   ++ +       PE +Y G
Sbjct: 126 AVIGDALARIGKHLGYQITTEYYVNDAGNQVDLLGLSIYLAGRENILGLHVTWPEEFYRG 185

Query: 204 VYLKHVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            Y+     +LA    +EL  + F +E  + ++  +    M+++I+ +L  ++I  + F+S
Sbjct: 186 EYIV----DLAHVAQAELGSVIFEDEANIAVLSTWGKDKMLELIKSNLADVDIFFEQFVS 241

Query: 262 EDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           E   + + D S  +     L +    YE                +  ++  RST +GD+ 
Sbjct: 242 EKSLYDKWDESFAK-----LQKNDKTYE----------------EGGKIWIRSTELGDEK 280

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY A D+ Y   K++R +D  I + G+DH GY+ R+++    +   +++
Sbjct: 281 DRVVVREDGRPTYLAGDIIYHDNKFQRSYDKYINIWGADHHGYITRVKSAINFLGYDESK 340

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + VLL ++V L + G P KMSKRAG+FI +  VV EVGSD++RF+ L +K+   L+FD  
Sbjct: 341 LEVLLAQMVSLLKGGEPYKMSKRAGNFILMSDVVSEVGSDALRFVFLSKKSDTHLEFDVD 400

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
             K++   NP+FY+ YA+AR   IF +A     D++        +P E+  + ++  L  
Sbjct: 401 VFKQEDSNNPIFYINYAHARINQIFAKAGKSIADVE-------NVPLENMSEEAQNLLFS 453

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L   P V+E+A  +++  K+  YL +LA+  H  ++  R          +  K     L
Sbjct: 454 ALL-LPEVLEDAFHSRQVQKVTEYLKNLAASLHKFYNENR-----VVGSVDEEKF----L 503

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           +L   VA  +  G+ +IG+ +   M
Sbjct: 504 KLFAVVALSLRVGMKLIGITAKERM 528


>gi|150021371|ref|YP_001306725.1| arginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793892|gb|ABR31340.1| arginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 543

 Score =  270 bits (689), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 187/554 (33%), Positives = 290/554 (52%), Gaps = 37/554 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P D   G  STN A+I ++     P  +A+L   +++ DP    V IAG GFIN  +
Sbjct: 25  IEIP-DEKFGDYSTNVALIGAKYFKKPPREVAKLFQEKLQSDPLFSEVSIAGPGFINFRI 83

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S S    IL  ++     Y + L  K  K+ +E+ SANPTGP  VGH R  V+GD L ++
Sbjct: 84  SKSVYVSILGKMIKKKENYWK-LPQKSIKIQLEYGSANPTGPFTVGHGRQLVIGDVLGNV 142

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + F GYEV +E Y+NDAG QI  LA S++ RY + L+    DLPE  Y G YL  + K+L
Sbjct: 143 LRFLGYEVDKEMYLNDAGRQIRLLAKSLWVRYNE-LFGKKYDLPEDGYKGSYLIDIAKKL 201

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   + ++   E    + K +  QA+  I+ D  + L++    F           + I
Sbjct: 202 VKEIEDKYVDVWNEN---VEKFFMQQAVANILSDMEQTLSMIDCKF----------NNKI 248

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R+    + + GYV + +L   K K     + D+      S  +G++ D+ L++ DG+YTY
Sbjct: 249 RESF--VIQLGYV-DKVLKILKEKDLV-YEKDQALWFKVSEFIGEN-DKVLIRRDGTYTY 303

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F  D+AY   K+ER +D +  + GSDH G++ R++A  +A+   +  +N +L + V L +
Sbjct: 304 FLTDIAYHLYKFERKYDKVYDIFGSDHHGHIPRMKAAMSALDIDEEFLNFILHQFVTLKK 363

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
               +KMS RAG+FITL  +V EVG D  R+  +    +  L FD    K +S ENPV+Y
Sbjct: 364 SNEIVKMSTRAGNFITLEELVKEVGKDPTRYFFVMNDINTHLVFDLDLAKSKSNENPVYY 423

Query: 454 VQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           VQYAYAR +SIF +A  K I  D     F  N+   E++    E+ +I  L E+   ++ 
Sbjct: 424 VQYAYARIKSIFEKAGEKGIKGD-----FLENIDLLEND---EEMGIIKLLDEFVNSLKQ 475

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P+ L  Y+Y L+  FH +++      + + V   N  +++ RL L+  V  I  
Sbjct: 476 VEEKLSPHFLTNYIYALSEKFHSYYA------KYKIVDEENISVSLARLGLLSVVKEIYK 529

Query: 572 SGLNIIGVESPNEM 585
               ++G+E+P  M
Sbjct: 530 IVFKLLGIEAPERM 543


>gi|57168053|ref|ZP_00367192.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020427|gb|EAL57096.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 497

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 282/537 (52%), Gaps = 44/537 (8%)

Query: 50  AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           A  L++ L   P++IA  + A+ +     D V  A  G++N  LS ++L ++ +  + + 
Sbjct: 2   AFSLAKELRKSPISIANELAAKFQEHSYFDKV-EALNGYLNFRLSKTFLNELANKALQNP 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            E+ +    K     +E+VSANPTGP+H+GH R AV GDTL  L    GY+   EYY+ND
Sbjct: 61  NEFSKGE-DKTESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVND 119

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG QI  L LS+    ++++ + + + PE YY G Y+  + KE  +K+  E   F EE  
Sbjct: 120 AGNQIYLLGLSILLSVKESILHENVEYPEQYYKGEYIADLAKEAFEKFGKEF--FSEEN- 176

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +P + D++   M+ +I+ +L+   I+ D ++SE  ++      +   +++L     +YE 
Sbjct: 177 IPSLADWAKDKMLVLIKQNLEQAKIKIDNYVSERSYY----DALNATLESLKEHKGIYE- 231

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                             ++   S++ GD+ DR +++ DG  TY AAD+ Y K K  RG+
Sbjct: 232 ---------------QEGKIWLASSLKGDEKDRVIIREDGRGTYLAADIVYHKDKMSRGY 276

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
              I + G+DH GY+ R++A    +      + ++L ++V L +DG P KMSKRAG+FI 
Sbjct: 277 GKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFIL 336

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  VVDE+GSD++R++ L +K    L+FD   ++++   NPV+Y+ YA+AR   +F +A 
Sbjct: 337 MSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAG 396

Query: 470 DIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               D +  DL            +   + L+        V+ +A  A+   K+  YL +L
Sbjct: 397 KKIDDVMKADL---------QSLNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNL 447

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ FH  ++   EN  +     N+       L+L   VA  I +  +++G+E+ N+M
Sbjct: 448 AANFHKFYN---ENKVVGSANEND------LLKLFSLVALSIKTAFSLMGIEAKNKM 495


>gi|119358466|ref|YP_913110.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166232775|sp|A1BJV9|SYR_CHLPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119355815|gb|ABL66686.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 551

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 185/562 (32%), Positives = 300/562 (53%), Gaps = 42/562 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           ++IERP D   G  STN A ++++    +P   A  ++A +   PD + S+ +AG GFIN
Sbjct: 24  VLIERPADKKFGDFSTNIAFLIAKESRRNPKEFAGELIAHLSFPPDTIKSMTVAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+P+++ + +  I++ G  YGR+ +GKG K  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FFLTPTFIMQSVEQILLEGKGYGRSCLGKGKKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+    Y VTREYY NDAG Q+  L  SV +RY + L       PE +Y G Y++ + 
Sbjct: 144 ANLLETQSYAVTREYYFNDAGRQMQILGESVRFRYLE-LCGVAETFPETHYQGAYIREIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHR-- 267
           + L   + + L    +   LP +K      + K I++ L+ + I+HD F +E   +HR  
Sbjct: 203 ESLFAGHGAALQGVHD--LLPFIKSAET-IIFKSIKNTLERIGIRHDSFFNEHTLYHREG 259

Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              S   ++ID L  + ++  Y+G                     F ++ +G + D+ L+
Sbjct: 260 SGQSANEEVIDLLREKQFIGEYDG------------------ATWFLTSRIGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   K++RG+D M+ V G+DH   Y   LEA+   +    ++I V 
Sbjct: 302 KSSGEPSYRLPDIAYHITKFKRGYDLMVNVFGADHIDEYPDVLEAL-KILGYDASRIQVA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    DG  +KMS R G+   L  +VD+VG D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVDGQSVKMSTRKGNADLLDDLVDDVGPDATRLFFIMRSKDSHLNFDIDLAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLA 503
           QSK+NPVFY+ YA+AR  S+ R A  +    D D    +++   +SE    EL+L + L 
Sbjct: 421 QSKDNPVFYLHYAHARICSLLRMAA-LENGFDPDGSGHHLLQLLDSE---PELRLGLLLL 476

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           EYP++I  +    EP K+  YL+ +A ++H  +   +E P L+        ++  RL L 
Sbjct: 477 EYPQMITASIRLLEPQKMVDYLHSVAELYHKFY---QECPILK----AEPDISKARLFLS 529

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ +G  I+G+ +P  M
Sbjct: 530 LATKQVLCNGFRILGISAPESM 551


>gi|23465834|ref|NP_696437.1| arginyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|39932215|sp|Q8G4V2|SYR_BIFLO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|23326531|gb|AAN25073.1| arginyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 620

 Score =  267 bits (682), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 181/617 (29%), Positives = 314/617 (50%), Gaps = 90/617 (14%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D++ + RP+D AHG  ++N AM L++  G+ P  +AE   A +     +  V +AG GF
Sbjct: 34  VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93

Query: 89  INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136
           IN+ L  +    ++ +++ +G             EYGRN    G  +N+EFVSANPTGP+
Sbjct: 94  INITLDSASAAAVVDAVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPI 153

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192
           H+G  R A VGD +A ++  +G +V REYY ND G QIN  A S+   + +A  NN    
Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211

Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232
              ++ P   Y G Y+  +   +  +  S+ ++      +++ L     P+         
Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   I+  +K   +  D++  E+  +      +   I+ L  +G +++   
Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF---KCKYERG 348
              K   T           F ST  GDD DR ++KS+G + YFAAD+AY+   + + E  
Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENS 373

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG P++MSKRAG+ 
Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  +V  VG D+ R+ +     ++  D D   +   + +NPV+YVQYA+AR +++ R 
Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493

Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           A      +   D  L        ++E D    +++  LA++P V+  A   ++P+K+A Y
Sbjct: 494 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 543

Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568
           L +LA+ +H  ++  R       +P  R      + L +           RL+L  AV  
Sbjct: 544 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 603

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL+++GV +P +M
Sbjct: 604 VIANGLDLLGVTAPEKM 620


>gi|34556632|ref|NP_906447.1| arginyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833211|sp|Q7MAK6|SYR_WOLSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34482346|emb|CAE09347.1| ARGINYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 528

 Score =  267 bits (682), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 170/558 (30%), Positives = 290/558 (51%), Gaps = 50/558 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V+E+P+D  HGH +T AA  L++ L  +P  IA+ +  ++      +SV   G G+IN 
Sbjct: 17  VVLEKPKDKNHGHYATPAAFSLAKELKKNPALIAQELSKKLSEIEVFESVQSVG-GYINF 75

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L    S  +  G E+G+    K   + +E+VSANPTGP+H+GH R AV+GD L+
Sbjct: 76  RLKQGFLDAQASLALSQGREFGKG--DKQGSILLEYVSANPTGPLHIGHARGAVLGDALS 133

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    GY +  EYY+NDAG QI+ L LS++   + +L +     PE YY G Y+  + K
Sbjct: 134 RIGRHLGYALETEYYVNDAGNQIHLLGLSIYLAGRDSLLSLPVTYPEQYYRGEYIVDIAK 193

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   K+  +   F +E ++P +  +  + M++ IR +L   +I  D ++SE   +     
Sbjct: 194 EALKKWGEK--AFADEAFIPELSLFGKELMLEEIRSNLADTHIHFDHYVSEKSLY----- 246

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
                     R    Y  +      ++ Q C     ++  RS+  GD+ DR +++  G  
Sbjct: 247 ---------PRWEETYALL------QSHQGCYEGGGKVWLRSSAHGDEKDRVIVRESGEP 291

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TY A D+ Y   K+ R +D  I + G+DH GY+ R++A    +    +++ VLL ++V L
Sbjct: 292 TYLAGDIIYHADKFARPYDRYINIWGADHHGYIARVKAAIEFLGHDSSKLEVLLSQMVTL 351

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            + G P KMSKRAG+FI +R V++++G+D++RF+ L +K    L+FD   + ++   NP+
Sbjct: 352 LKGGQPYKMSKRAGNFILMRDVLEDIGADALRFIFLSKKPDTHLEFDVDDLNKEDSSNPI 411

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP--QESEFDTSELQLIVHLAEYPRVI 509
           FY+ YA+AR  ++  ++      LD        +   ++S FD   L L     + P+V+
Sbjct: 412 FYINYAHARIHTMLGKS-----SLDSQEIEAASLEGLEDSIFDLLFLSL-----QLPQVL 461

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVA 567
           E++   +   K+A YL  LA  FH  ++  +  E P+               L++   VA
Sbjct: 462 EDSFENRAIQKVAEYLRALAGEFHKFYNEHKILETPQ-----------EAALLKVCKVVA 510

Query: 568 SIINSGLNIIGVESPNEM 585
             ++ GL ++G+ +   M
Sbjct: 511 LSLSQGLALLGITAKERM 528


>gi|110004341|emb|CAK98679.1| probable arginyl-trna synthetase protein [Spiroplasma citri]
          Length = 557

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 182/586 (31%), Positives = 296/586 (50%), Gaps = 51/586 (8%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+ YLK  +  I V        ++E+PR    GHLSTN A++L++ L   P  IAE I+A
Sbjct: 12  LQEYLKANNLTIPV--------MVEKPRQEGFGHLSTNLALLLAKKLKKTPNKIAEEIIA 63

Query: 71  RIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            I+ +       + IAG GFIN  L+   L ++++ ++     YG +   K    N+E V
Sbjct: 64  FIEKNNKSYFKKIEIAGAGFINFTLADDQLHQVINEVLKRQANYGYS-AAKNFTYNLEIV 122

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +H+GH R   +GD++A ++  +GY V  EYY+NDAG QINTLA++VF  Y   
Sbjct: 123 SANPTGFLHIGHARNCAIGDSVARILRAAGYHVQTEYYVNDAGNQINTLAVTVFVSYLNL 182

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEE------KWLPIVKDYSVQA 240
           L    ++LP   Y G     V +   D Y  + +N  F E+      K   I +  SV  
Sbjct: 183 L-GKKTELPADAYRGDMYDAVAQYFVDNYQDKFINLTFNEDYKISDPKVHEIFRKKSVDL 241

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            + II+  L+   +  + + SE   + G    I   +   A+ G  Y+            
Sbjct: 242 FLDIIKKQLQLFRVDIEYYSSEASMYEG--GKIDATLAQYAKLGKTYQ------------ 287

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSD 359
                   L  ++T  GDD DR L+KS+G  TY   DLA    +  R   D ++   G D
Sbjct: 288 ----QDGALWLKTTDFGDDKDRVLVKSNGDLTYITPDLASHNERLIRSKADKLVNFWGGD 343

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R+ A    +  KK  +++ + ++VRL +DG   KMSKR G  + L  +++E+G 
Sbjct: 344 HHGYIVRMLAGLQLLGYKKDILDIDMIQMVRLIKDGAEYKMSKRKGTAVWLIDLIEEIGV 403

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++R+M+  +     +D D   +K+ S +NPV+Y QYA ARC S+ +QAK     ++F  
Sbjct: 404 DAIRYMVSSKSAQSHMDLDIGILKQHSSKNPVYYAQYATARCNSVLKQAK--ISKINF-- 459

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +V   E      EL L+  +  + R I+ A   ++P+ +  Y+ ++A  FH +++  
Sbjct: 460 --TDVKTFELLTSQKELYLLNEIDLFNRCIKGAAKLRQPHLICDYVQNIARQFHSYYNES 517

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +  +N +LT  RL  +  +  ++++  N++GV    +M
Sbjct: 518 ------KVINLDNLELTKQRLVFIKVIYQVLSNAFNLLGVNVIEQM 557


>gi|222824086|ref|YP_002575660.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782949|sp|B9KCX0|SYR_CAMLR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222539308|gb|ACM64409.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 531

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 290/564 (51%), Gaps = 42/564 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++++K+    ++E P++    H +T  A  L++ L  +P+ IA  IV ++K D D     
Sbjct: 8   EIKEKLGRDFILENPKNKNLAHFATPLAFSLAKELKQNPMIIANDIVVKLK-DCDCFESV 66

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            A  G++N  LS ++L  + +  +     + ++   K     +E+VSANPTGP+H+GH R
Sbjct: 67  EALNGYVNFKLSKAFLNSLATQALSDSENFAKD-DKKEQSFLLEYVSANPTGPLHIGHAR 125

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A+ GDTL  +    GY+   EYY+NDAG QI  L LS+    ++         P+ YY 
Sbjct: 126 GAIFGDTLTRVARHLGYKFDTEYYVNDAGNQIYLLGLSILLAVKEHCLKEQVQYPDEYYK 185

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y+  V KE   ++  +   F EE  +P +  ++   M+KII+ +L    I  D ++SE
Sbjct: 186 GEYIIDVAKEAFAEFEKDF--FVEEN-IPQLALWAKDKMLKIIKQNLADAKIFIDAYVSE 242

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++    S + + +  L   G  YE                   ++   S++ GD+ DR
Sbjct: 243 TSYY----SELENTLKALKEHGGTYE----------------QDGKIWLASSVKGDEKDR 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            ++K DG  TY AAD+ Y K K  RG+D  I + G+DH GY+ R++A    +      + 
Sbjct: 283 VIIKDDGKGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIARMKAAMEFLGHDSQNLE 342

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           ++L ++V L ++G P KMSKRAG+FI +  V++E+GSD +R++ + +K    L+FD  + 
Sbjct: 343 IILAQMVSLLKNGEPYKMSKRAGNFILMGDVLEELGSDVLRYIFISKKCDTHLEFDVDEF 402

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K++   NPV+Y+ YA+AR   +F +A     D+ +  F           +   + L+   
Sbjct: 403 KKEDSSNPVYYINYAHARIHQVFAKAGKSVDDVMYAKFES--------LNEDGMNLLFES 454

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                V+ +A  ++   K+  YL +LAS+FH  ++  +       V  ++ +   ++L  
Sbjct: 455 LNLKAVLNDAFESRSLQKIPDYLKNLASLFHKFYNENK-------VVGSDNEDEFLKLFA 507

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
           + A++  I     ++G+E+ N+M+
Sbjct: 508 ICALS--IKIAFALMGIEAKNKMN 529


>gi|78187934|ref|YP_375977.1| arginyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|109895014|sp|Q3B147|SYR_PELLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78167836|gb|ABB24934.1| arginyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 552

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/562 (31%), Positives = 284/562 (50%), Gaps = 41/562 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           I+IE+P     G  +TN A + ++ L  +P  +AE +    +  +  V    +AG GFIN
Sbjct: 24  IIIEKPTSPKFGDYATNIAFLAAKELKRNPRQLAEELTGHFRFPEGTVTKTEVAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++ P+++ +    +   G EYG+   G+G    +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FFMEPAFIMQSAERVFREGAEYGKGREGQGKTAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L    GY V REYY NDAG Q+  L  SV +RY + L     D P+ +Y G Y+  + 
Sbjct: 144 ANLAEAQGYHVNREYYFNDAGRQMQILGESVRYRYME-LCGRTIDFPDTHYKGGYIGEIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD- 269
           +++  ++  +LL+   E   P  +  +   +   I+  L  L I HD F +E   +  D 
Sbjct: 203 EKIHSEHGEDLLHV--ESIEPF-RSEAESIIFSSIQKTLGRLGIVHDSFFNEHTLYTADL 259

Query: 270 --PSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              SP +++ID L  +G++  Y+G                     F +T +G + D+ L+
Sbjct: 260 NGISPNQNVIDRLREKGFIGEYDG------------------ATWFLTTKLGQEKDKVLI 301

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384
           KS G  +Y   D+AY   KY RGFD +I V G+DH   Y   LEA+   +    A + + 
Sbjct: 302 KSSGEPSYRLPDIAYHVTKYARGFDMIINVFGADHIDEYPDVLEAL-KILGHDTAHVRIA 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + + V    +G  +KMS R G+   L  ++D+VG D+ R   + R     L+FD    K+
Sbjct: 361 INQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGPDATRLFFIMRSKDSHLNFDVELAKK 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLA 503
           QSK+NPVFY+QYA+AR  S+ R A   + ++ FD   R          T  ELQL   + 
Sbjct: 421 QSKDNPVFYLQYAHARICSLLRLA---WSEIGFDAAKRPEPGVLMRLTTPEELQLAFGIL 477

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++     +A    EP K+  Y++ +A +FH  +   +E P L+       ++   RL L 
Sbjct: 478 DFGEASRSAFRMLEPQKMVDYMHSIAELFHRFY---QECPILK----AEPEIAEARLFLA 530

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++ +G  I+G+ +P  M
Sbjct: 531 VAVRQVLQNGFRILGISAPESM 552


>gi|149195098|ref|ZP_01872190.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134811|gb|EDM23295.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 539

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 174/564 (30%), Positives = 303/564 (53%), Gaps = 55/564 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I +P+    GH +       ++    +P+  A+ +  ++K D + +SV     GF+N+ L
Sbjct: 19  INKPKQKEFGHYAV-PIFKYAKENKQNPIEFAKNLCEKLKCD-EFESVEPLS-GFVNIKL 75

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S  +L    + ++     + ++   K   + +E++SANPTGP+H+GH R A+ GD L  +
Sbjct: 76  SDKFLDDFANKVLEEKENFAKD--EKKESILLEYISANPTGPLHIGHARGAIFGDALTRI 133

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY++T EYY+NDAG QIN L LSV+   ++ L  N +  P+ YY G Y+K + K+ 
Sbjct: 134 GRHIGYKITTEYYVNDAGRQINLLGLSVYLAAREILGLNVT-WPDEYYKGEYIKDLAKDA 192

Query: 214 ADKYSSELLNF------PEEKWLPIVKD-----YSVQAMMKIIRDDLKALN-IQHDIFIS 261
            +++  +           E+K   I +D     ++   M++ I+ D+KALN I  D ++S
Sbjct: 193 IEEFGEDYFKKEVEIIQKEDKKEAIFEDERLSLWAKDKMLEEIKKDIKALNVIPFDNWVS 252

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   ++     +R I   L +   +YE                   ++  +S+   D+ D
Sbjct: 253 ERSLYKY-WDEVRTI---LEKNNALYE----------------KDGKIWLKSSEYKDEKD 292

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           R +++ DG  TY A D+ Y   K++RG+D  I + G+DH GY+ R++A    +   + ++
Sbjct: 293 RVVVREDGRPTYLAGDIIYHWDKFKRGYDRYINIWGADHHGYIARVKAAIKFLGFDERKL 352

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +LL ++V+L + G P KMSKRAG+FI +R VV++VG+D++RF+ L +K    L+FD   
Sbjct: 353 EILLSQMVKLLKGGEPYKMSKRAGNFILVRDVVEDVGADALRFVFLTKKADTHLEFDVDD 412

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           + ++   NP +YV YA+AR RSIFR     + D+  ++  +N+   E E     LQL   
Sbjct: 413 LNKEDSSNPNYYVNYAHARIRSIFRNKNIDYDDIK-NIELKNLNEDEKELLFLALQL--- 468

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
               P V+E+A   +EP++L  +L DLAS FH  ++  +       V  + ++   +RL+
Sbjct: 469 ----PYVLEDAFTNREPHRLTNFLIDLASEFHKFYNKNK-------VIGSEKE--EIRLK 515

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           ++  V SI+  GL+++G+ +   M
Sbjct: 516 ILAVVGSILKLGLSLLGITAKERM 539


>gi|71893371|ref|YP_278817.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|109895006|sp|Q4AAT7|SYR_MYCHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71851498|gb|AAZ44106.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|312600985|gb|ADQ90240.1| Arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 534

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 174/567 (30%), Positives = 309/567 (54%), Gaps = 56/567 (9%)

Query: 23  KVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79
           K E  I+D  +++IE+ ++   G  S+N A+I ++   +D L +A+ I  ++   + +++
Sbjct: 14  KNENLIIDESKLIIEKSKN--FGDYSSNVALIFAKQNKIDSLKLAQTIKNQLLSENLNLE 71

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
            + IA  GFIN ++S +    I+S I+  G  +GR  + K  K+N+EFVSANPTG +H+G
Sbjct: 72  KIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLEFVSANPTGFLHLG 129

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV+GD LA+++ FSG  V REYYIND G+QI+ L  SVF RYQQ        LPE 
Sbjct: 130 HLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVGSVFSRYQQIF--KKFALPEE 187

Query: 200 YYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            Y G  +    ++    Y+++  N    + +   I ++ S++  +  I+ DL  L+I+ D
Sbjct: 188 AYLGEDIIWCAQKFFQIYANKFENSSLDDLETYKIFREKSIEIFLDEIKADLANLSIKFD 247

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +F SE +  R +      +  NLA   +VY+                  + +  +++  G
Sbjct: 248 VFSSESELFRTEK-----VQKNLANLPFVYK----------------KEEAIWLKTSKFG 286

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVS 375
           D  DR L+K +G +TYF++D+AY   K    F  D +I + G+DH GYV R++A    V+
Sbjct: 287 DQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIGYVDRMKAALKTVN 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             + ++++LL +LV+L+++G   KMSKR G   T++ +++ V  D++R+ +  R  + L+
Sbjct: 347 LNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAIRYFISERSYNSLV 405

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           +FD     + S +NP+F +QYA+AR   +   +          + P  ++  E+E   +E
Sbjct: 406 EFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIVPEKILKFEAE---NE 453

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             LI  L ++  ++   T   +   L  YL +LA++F+  +S+ +       +  N  + 
Sbjct: 454 TILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNSK-------IIGNQNQN 506

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582
           ++  L L  AV  ++ +GL ++G+++ 
Sbjct: 507 SL--LSLTKAVQIVLKNGLKLLGIKAK 531


>gi|255023773|ref|ZP_05295759.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 359

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/378 (39%), Positives = 219/378 (57%), Gaps = 20/378 (5%)

Query: 64  IAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +AE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K
Sbjct: 1   MAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEK 60

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L LS  
Sbjct: 61  FQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAE 120

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++   +
Sbjct: 121 ARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFEI 179

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R DL+   +  D + SE   +  + + +   ++ L   GY+YE              
Sbjct: 180 GKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE-------------- 223

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D    L R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH G
Sbjct: 224 -QDGATWL-RTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHG 281

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ 
Sbjct: 282 YIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDAT 341

Query: 423 RFMMLWRKNSELLDFDFC 440
           R+    R +   ++FD  
Sbjct: 342 RYFFAMRSSDTHMNFDMS 359


>gi|240047288|ref|YP_002960676.1| arginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984860|emb|CAT04851.1| Arginyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 518

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/570 (31%), Positives = 296/570 (51%), Gaps = 67/570 (11%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I D   I   +   H   ++N A+IL+    L P+ +AE I  +IK + ++  V +A  G
Sbjct: 4   IFDESKIIISQSSKHADFTSNIALILAAINKLSPMELAEQISQKIKTNNNIAKVEVAKPG 63

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN ++S     +I+  I+     YG     +  K+NIEFVSANPTG +H+GH R A++G
Sbjct: 64  FINFFISNQGFVEIIQKIIKEDDCYGSQ--KQNKKINIEFVSANPTGFLHLGHLRSAIIG 121

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203
           D LA ++ FSG +V REYYIND G Q++ L  S+  RY Q +++ +  +P+  Y G    
Sbjct: 122 DVLARVLEFSGNQVLREYYINDFGVQVDRLTSSLIARYDQ-IFDKNVVMPQDSYVGEDIV 180

Query: 204 -----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                +YL     E+ DK+  +  N  + ++     +  +Q  +  I+ DL  L+I  D 
Sbjct: 181 WGANKIYL-----EIGDKFQKDYKNEDKREFFW---NKGLQIYLDEIKKDLTNLDIFFDK 232

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           + SE + H+        I  N+ +    YE                    L  +++  GD
Sbjct: 233 YSSEAELHKNSI-----IKTNIKKLPGTYE----------------QDGALWLKTSQYGD 271

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           D DR L+K DG YTYF AD+ Y   K    F  D +I + G+DH GYV R+++  + V E
Sbjct: 272 DKDRVLIKQDGKYTYFGADICYHLEKINSSFHPDLLINIWGADHIGYVDRIKSALSLVGE 331

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +  ++ +LL +LV+L ++G   KMSKR G   T++ ++     DS+R+ M+ R  + +++
Sbjct: 332 QD-KLYILLYQLVKLLKNGQEFKMSKRKGSTFTIKDILKLADKDSIRYFMVERSENSIIE 390

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-E 495
           FD  KV + +++NP+F +QYAYAR   +  + +  F ++             S F+T  E
Sbjct: 391 FDIEKVNQINEQNPLFIIQYAYARSYQLLEKIQYNFNNI-------------SSFNTPFE 437

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           ++LI  L E+  +I   +   +   L  YL DLA+ F+  +S+ +       +  + RK 
Sbjct: 438 IKLINELKEFEVIIAKISHNYKINLLNKYLLDLANSFNSFYSNVK-------ILDSPRKD 490

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++M   +V AV  +I +GL ++G++   ++
Sbjct: 491 SLM--AIVKAVNIVIRNGLKLLGIQGKEKV 518


>gi|72080354|ref|YP_287412.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|109895005|sp|Q4A900|SYR_MYCH7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71913478|gb|AAZ53389.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 534

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 309/567 (54%), Gaps = 56/567 (9%)

Query: 23  KVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79
           K E  I+D  +++IE+ ++   G  S+N A++ ++   +D L +A+ I  ++   + +++
Sbjct: 14  KNENLIIDESKLIIEKSKN--FGDYSSNVALMFAKQNKIDSLKLAQTIKNQLLSENLNLE 71

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
            + IA  GFIN ++S +    I+S I+  G  +GR  + K  K+N+EFVSANPTG +H+G
Sbjct: 72  KIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLEFVSANPTGFLHLG 129

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV+GD LA+++ FSG  V REYYIND G+QI+ L  SVF RYQQ        LPE 
Sbjct: 130 HLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVSSVFSRYQQIF--KKFALPEE 187

Query: 200 YYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            Y G  +    ++    Y+++  N    + +   I ++ S++  +  I+ DL  L+I+ D
Sbjct: 188 AYLGEDIIWCAQKFFQIYANKFENSSLDDLETYKIFREKSIEIFLDEIKADLANLSIKFD 247

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +F SE +  R +      +  NLA   +VY+                  + +  +++  G
Sbjct: 248 VFSSESELFRTEK-----VQKNLANLPFVYK----------------KEEAIWLKTSKFG 286

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVS 375
           D  DR L+K +G +TYF++D+AY   K    F  D +I + G+DH GYV R++A    V+
Sbjct: 287 DQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIGYVDRMKAALKTVN 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             + ++++LL +LV+L+++G   KMSKR G   T++ +++ V  D++R+ +  R  + L+
Sbjct: 347 LNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAIRYFISERSYNSLV 405

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           +FD     + S +NP+F +QYA+AR   +   +          + P  ++  E+E   +E
Sbjct: 406 EFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIVPEKILKFEAE---NE 453

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             LI  L ++  ++   T   +   L  YL +LA++F+  +S+ +       +  N  + 
Sbjct: 454 TILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNSK-------IIGNQNQN 506

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582
           ++  L L  AV  ++ +GL ++G+++ 
Sbjct: 507 SL--LSLTKAVQIVLKNGLKLLGIKAK 531


>gi|237753349|ref|ZP_04583829.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375616|gb|EEO25707.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 539

 Score =  263 bits (672), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 173/562 (30%), Positives = 293/562 (52%), Gaps = 49/562 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E+PRD + GH +       ++ L   P  IA+    +++  P + SV +   G++N  
Sbjct: 18  VLEKPRDKSFGHFAL-PTFSFAKTLKKAPQIIAQEFAQKLESIPQIASVSVVN-GYVNFS 75

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGK-----GTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS ++L +     +    +    L  K       KV +E+VSANPTGP+H+GH R AV G
Sbjct: 76  LSNAFLGQCAWEFLQDDFKESSKLESKKVESRNEKVLLEYVSANPTGPLHIGHARGAVFG 135

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D+LA +  F GY +  EYYINDAGAQI  L  S+++  +  +++   +LP   Y G Y+ 
Sbjct: 136 DSLARIGRFLGYTIHTEYYINDAGAQIQKLGKSIYYAGRALVFSESRELPSECYQGEYVF 195

Query: 208 HVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
               ELA+   +EL    F   + L  +  +    M+  I+ +L  + I  D ++SE + 
Sbjct: 196 ----ELAECARAELGESVFESLESLEKLSVFGKDKMLLEIKSNLAQVGIVFDSYVSEREL 251

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                S +   +++L     VYE                   +L  +ST  GD+ DR ++
Sbjct: 252 F----SQLDSTLESLKAHNGVYES----------------ENKLWLKSTEFGDEKDRVIV 291

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +  G  TY A D+ Y K K+ERGF + I + G+DH GY+ R++A    +     ++ VLL
Sbjct: 292 RESGEATYLAGDIIYHKNKFERGFSHYINIWGADHHGYIARVKAALEYLGFDSQKLEVLL 351

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L +DG+P KMSKRAG+FI ++ VVDEVG+D++R M L +K    L+FD   +K+Q
Sbjct: 352 AQMVALLKDGIPFKMSKRAGNFILMKDVVDEVGADALRLMFLSKKPDTHLEFDVELLKKQ 411

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQLIVHLA 503
              NPV+Y+ YA+AR  ++F ++     +   +      + Q   +D  E    L+V   
Sbjct: 412 DSSNPVYYINYAHARIHTLFSKS-----NFTMESLKALSLEQYKAWDLQESLRDLLVLAL 466

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
              +V+ +A   +   K+  YLY L++ FH  ++  +       +   +++  ++++ +V
Sbjct: 467 GIEKVLSDAFSQRLINKVVDYLYTLSADFHRFYNETK-------ILNTDQEEQILKVLVV 519

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  +  GL+++GV++  +M
Sbjct: 520 --VAHSLALGLDLLGVKAKVKM 539


>gi|13357838|ref|NP_078112.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761964|ref|YP_001752362.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920258|ref|ZP_02691286.2| arginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508719|ref|ZP_02958202.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701953|ref|ZP_02971591.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|38258402|sp|Q9PQL3|SYR_UREPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083554|sp|B1AIR8|SYR_UREP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|11271728|pir||B82912 arginyl tRNA synthetase UU278 [imported] - Ureaplasma urealyticum
 gi|6899250|gb|AAF30687.1|AE002124_9 arginyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827541|gb|ACA32803.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902661|gb|EDT48950.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675642|gb|EDT87547.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700707|gb|EDU18989.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 550

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 177/568 (31%), Positives = 295/568 (51%), Gaps = 57/568 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I++++ ++   G   TN AMILS+      L IA+ I    + D  ++ V +   GF+N
Sbjct: 26  KILVDKTKNIKFGDFYTNIAMILSKKNNKSSLEIAKEIANNFEQDLFLE-VNLQPPGFLN 84

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L       +L  I      +G+    K    NIE+VSANPTG +H+ H   A+ GD L
Sbjct: 85  FKLKAKDHENLLKQIYYEKDRFGQ-FSKKNITYNIEYVSANPTGYLHIAHAANAIYGDIL 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+   GY+V  EY+INDAG QI+ LA+SV  RY Q L N +  LP   Y G  +  V 
Sbjct: 144 ANLLKIYGYDVETEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIQLPADAYHGQEIHLVA 202

Query: 211 KELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           + L   Y ++ +N    +   I        +K+++V+ ++  I++DL ++N   D + SE
Sbjct: 203 QTLYQTYKNQFINVRLNEKYEIDDDIANQEIKNFAVKYLLNEIKNDLASINTFIDTYTSE 262

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           +     +   I +++  +    Y  +G                   L  ++T  GDD DR
Sbjct: 263 NWIR--NSGRILEVLSKIKPYTYTLDG------------------ALWLKTTTFGDDKDR 302

Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            L+KSDGSYTYF  D+AY   K+ +     +I V G+DH GY+ RL+A   A+      +
Sbjct: 303 VLIKSDGSYTYFTPDIAYHDYKFNKTNTTKLIDVWGTDHLGYIARLKAAMNALGYDPNNL 362

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLDFDF 439
            ++  ++++L ++    K+SKR+G  +T++ +V+ +G D++R F+     NS  ++D D 
Sbjct: 363 EIVCAQVMKLVKNNQEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVIIDVDI 422

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF--DLFPRNVIPQESEFDTSELQ 497
              K  +  NP++YVQYA+AR   +    K ++ +LDF  DL            +T E +
Sbjct: 423 ALSKNNN--NPLYYVQYAHARANQVLN--KQVY-ELDFKTDLLT----------ETRERE 467

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  L  Y + I NA   +EP++++ YLYDLA +FH ++++ + N        NN+ L+ 
Sbjct: 468 LLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANVKIN------NDNNKVLSA 521

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  LV  V  ++ +GL I+ +   ++M
Sbjct: 522 QRYTLVWCVKQVLANGLAIMKITPYDQM 549


>gi|171920791|ref|ZP_02931487.2| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179047|ref|ZP_02964791.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024320|ref|ZP_02997001.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518655|ref|ZP_03004094.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524461|ref|ZP_03004470.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273663|ref|ZP_03206198.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554068|ref|YP_002284679.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225551313|ref|ZP_03772259.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903551|gb|EDT49840.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209032|gb|EDU06075.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018999|gb|EDU57039.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997759|gb|EDU66856.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659663|gb|EDX53043.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249691|gb|EDY74472.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541569|gb|ACI59798.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379128|gb|EEH01493.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 548

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 176/569 (30%), Positives = 300/569 (52%), Gaps = 59/569 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFI 89
           ++++++ ++   G   TN AM LS+ +   PL +A+ I+  +  D D+   V +   GF+
Sbjct: 24  KVLVDKTKNIKFGDFYTNVAMTLSKRVNQSPLVVAKEIINNL--DQDLFFKVNLQPPGFL 81

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L       +L+ I      +G+    K    N+E+VSANPTG +H+ H   A+ GD 
Sbjct: 82  NFTLKAKDHEDLLTQIYDQKDLFGQ-FAKKNITYNVEYVSANPTGYLHIAHAANAIYGDI 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA+L+   GY+V  EY+INDAG QI+ LA+SV  RY Q L N + +LP   Y G  +  V
Sbjct: 141 LANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIELPTDAYHGQEIYLV 199

Query: 210 GKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + L + Y  + +N    +   I        +K ++V  ++  I+ DL ++N   D + S
Sbjct: 200 AQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAVSYLLDEIKKDLASINTYIDTYTS 259

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E+         I +++  + +  Y  +G                   L  R+T  GDD D
Sbjct: 260 ENWIRSS--GRILEVLSKIKQHTYTLDG------------------ALWLRTTAFGDDKD 299

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           R L+KSDGSYTYF  D+AY   K+ +  DN   +I V G+DH GY+ RL+A  +A+    
Sbjct: 300 RVLIKSDGSYTYFTPDIAYHDYKFSK--DNTTKLIDVWGTDHLGYIARLKAAMSALGYDP 357

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLD 436
             + ++  ++++L ++    K+SKR+G  +T++ +V+ +G D++R F+     NS  ++D
Sbjct: 358 NNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVVID 417

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            D    K  +  NP++YVQYA+AR   +    K ++   +FD F  +++      +T E 
Sbjct: 418 VDIALSKNNN--NPLYYVQYAHARANQVLN--KQVY---EFD-FKTDLL-----IETRER 464

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L  Y + I NA   +EP++++ YLYDLA +FH ++++ + N        NN+ L+
Sbjct: 465 ELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANIKINDE------NNKALS 518

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  LV  V  ++ +GL I+ +   ++M
Sbjct: 519 AQRYTLVWCVKQVLANGLAIMKITPYDQM 547


>gi|294155847|ref|YP_003560231.1| arginine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600461|gb|ADE19957.1| arginine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 544

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 185/584 (31%), Positives = 304/584 (52%), Gaps = 52/584 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI- 68
            +KN L E   KI  + K+     +  P+   +   ST+ A I+++   L+P+ +A  I 
Sbjct: 5   EIKNKLLEELTKISKKLKLAKEPFLIEPK--TNADFSTSMA-IINKTTELNPVQLANKIK 61

Query: 69  --VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
             + ++  +  +  + +AG GFIN++L   + ++ ++ I+  G +YG+    +   +N+E
Sbjct: 62  DELNKVSKNLYLKDIEVAGPGFINIFLDDEFFKQSVNEILKKGSDYGKG--NRKGFLNLE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A +G  ++++  F+G +VTREYYINDAG QI+ LA S+F RYQ
Sbjct: 120 WVSANPTGYLHVGHARNAAIGSAVSNICEFAGIKVTREYYINDAGNQIDMLANSLFARYQ 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKI 244
           Q +++    +PE  Y G  +    +++  KY  E     E K   L   K   V   +  
Sbjct: 180 Q-IFDKKYKMPEECYKGDDITWAAEQMFKKYG-EKFKGDECKGDVLNTFKKDGVDLFLGE 237

Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +  DL+    I+ DI++SE   +  D   I++ +  L +  YV +G              
Sbjct: 238 VEKDLEKFGGIKFDIWMSEKSLYENDQKAIKETLKKL-KNSYVKDG-------------- 282

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHS 361
                   ++T+ GDD DR L+KSDGS TYF  D+AY   K+  E+G   ++ V G+DHS
Sbjct: 283 ----ATWLKTTIHGDDKDRVLIKSDGSLTYFTPDIAYHHIKFHREKGRTVVMNVWGADHS 338

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+KR++     + E    + VL  +LVRL ++G   KMSKR G    LR  +D VG DS
Sbjct: 339 GYIKRMKCAIEDLGENPDDLVVLCMQLVRLVKNGEEYKMSKRKGTSFYLRDFIDLVGVDS 398

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF++L R  +  LDFD      ++ +NP   VQYA AR  S+  ++      ++   F 
Sbjct: 399 ARFILLDRTYNSKLDFDIDIASNKTNDNPAILVQYANARAFSLLEKSTLDLKGIELSEFS 458

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  +EFD    +LI  L E+P +++ +        +  YL  LA  F+  +S+   
Sbjct: 459 -------NEFDK---KLISTLLEFPEIVDRSAELYLTNLMTQYLIKLAKDFNSWYSN--- 505

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P+   V  +  + +M  L LV A  +++ +G+ +IG+   ++M
Sbjct: 506 SPK---VIGHENEESM--LSLVKATNTVLETGMKLIGITINHKM 544


>gi|322378816|ref|ZP_08053242.1| arginyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148740|gb|EFX43214.1| arginyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 536

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/575 (29%), Positives = 295/575 (51%), Gaps = 54/575 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           K  +E+ +   +++E P+D + GH ++  A  L++     P  IA  +V R+  D +  +
Sbjct: 6   KTLLERVLQTEVILEHPKDRSLGHYASVVAFPLAKVYKKPPKIIALELVDRLLEDEECQA 65

Query: 81  VFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           VF    A  G+IN  L  S+L +  +  +  G+++G+    K   + +EFVSANPTGP+H
Sbjct: 66  VFAKIEALNGYINFTLKESFLDRFCNQALKLGVDFGKE-ADKNESLYLEFVSANPTGPLH 124

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH R A+ GD+  +L  F GY V  EYY+ND GAQI  L LS+ W     + +   + P
Sbjct: 125 IGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSL-WLAICEMQHLKVEYP 183

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
             YY G Y+  + ++  + +    LN  +      + D++ + ++  I   L  L I  +
Sbjct: 184 TEYYRGAYINELAQKALEHFPD--LNNNDPNLYATLGDFAKEVVLAQIEQSLADLGIVIE 241

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            + SE    R   +   ++   L + G VYE                + K+ L +S+M G
Sbjct: 242 NYASE----RAMFAHQEEVFKRLEQAGGVYE---------------FEGKRWL-KSSMFG 281

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D+ DR + K+DG +TY A D+ Y   K+++GFD+ I + G+DH GYV R++A    +  +
Sbjct: 282 DEKDRVIRKNDGDFTYIAGDITYHDYKFKQGFDHYINIFGADHHGYVARIKAALQFLGYE 341

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
             ++ VLL ++V L ++G P KMSKRAG+ + L  V++++G D++RF+ L +K    L+F
Sbjct: 342 AQKLEVLLVQMVALLQNGKPYKMSKRAGNSVLLSDVLEDMGKDALRFVFLSKKLDTHLEF 401

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTSEL 496
           D   +++Q   NP+FY+ YA AR  ++  +    F   +  L  + ++    E    S  
Sbjct: 402 DIASLQKQDSSNPIFYIHYANARIHTMLEK---FFQKPNASL--QAILSSSLENLPESGG 456

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPRLRFVQA 550
            L+ +    P++++ A   +E  K+  YL  LA+ FH  ++  R      E P L+  Q 
Sbjct: 457 ALLFNALNLPKILQTAFQDRELQKICDYLKGLAADFHSFYNAYRILDTPQELPYLKLCQM 516

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  LT+               GL ++G+E+  +M
Sbjct: 517 VSLSLTI---------------GLKLLGIEAKRKM 536


>gi|195867603|ref|ZP_03079605.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660660|gb|EDX53915.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 547

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 176/569 (30%), Positives = 300/569 (52%), Gaps = 59/569 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFI 89
           ++++++ ++   G   TN AM LS+ +   PL +A+ I+  +  D D+   V +   GF+
Sbjct: 23  KVLVDKTKNIKFGDFYTNVAMTLSKRVNQSPLVVAKEIINNL--DQDLFFKVNLQPPGFL 80

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L       +L+ I      +G+    K    N+E+VSANPTG +H+ H   A+ GD 
Sbjct: 81  NFTLKAKDHEDLLTQIYDQKDLFGQ-FAKKNITYNVEYVSANPTGYLHIAHAANAIYGDI 139

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA+L+   GY+V  EY+INDAG QI+ LA+SV  RY Q L N + +LP   Y G  +  V
Sbjct: 140 LANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIELPTDAYHGQEIYLV 198

Query: 210 GKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + L + Y  + +N    +   I        +K ++V  ++  I+ DL ++N   D + S
Sbjct: 199 AQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAVSYLLDEIKKDLASINTYIDTYTS 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E+         I +++  + +  Y  +G                   L  R+T  GDD D
Sbjct: 259 ENWIRSS--GRILEVLSKIKQHTYTLDG------------------ALWLRTTAFGDDKD 298

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           R L+KSDGSYTYF  D+AY   K+ +  DN   +I V G+DH GY+ RL+A  +A+    
Sbjct: 299 RVLIKSDGSYTYFTPDIAYHDYKFSK--DNTTKLIDVWGTDHLGYIARLKAAMSALGYDP 356

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLD 436
             + ++  ++++L ++    K+SKR+G  +T++ +V+ +G D++R F+     NS  ++D
Sbjct: 357 NNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVVID 416

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            D    K  +  NP++YVQYA+AR   +    K ++   +FD F  +++      +T E 
Sbjct: 417 VDIALSKNNN--NPLYYVQYAHARANQVLN--KQVY---EFD-FKTDLL-----IETRER 463

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L  Y + I NA   +EP++++ YLYDLA +FH ++++ + N        NN+ L+
Sbjct: 464 ELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANIKINDE------NNKALS 517

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  LV  V  ++ +GL I+ +   ++M
Sbjct: 518 AQRYTLVWCVKQVLANGLAIMKITPYDQM 546


>gi|26554064|ref|NP_757998.1| arginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747673|sp|Q8EVF2|SYR_MYCPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|26454072|dbj|BAC44402.1| arginyl tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 564

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 176/577 (30%), Positives = 288/577 (49%), Gaps = 69/577 (11%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGK 86
           L+  V+++ +    G   +N AMIL+  L  +P+ IAE I   +K       +S      
Sbjct: 28  LNDFVVDKAKSIEFGDFYSNVAMILASKLKKNPILIAEEICEYLKNHKTNLFESTEAVKP 87

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV--NIEFVSANPTGPMHVGHCRCA 144
           G+IN++LS S    +   I      YG   I +  KV  NIEFVSANPTG +H+GH R A
Sbjct: 88  GYINVFLSNSVKSDLFKQINKDKDTYG---IFEPKKVAYNIEFVSANPTGSLHIGHARNA 144

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG- 203
            +G TL ++    GY + +EYYIND G QIN L +SVF+RY Q     D  + E +Y G 
Sbjct: 145 ALGQTLGNVWKAYGYTIEQEYYINDGGNQINNLGMSVFYRYLQKC-GKDVQMEEDFYQGS 203

Query: 204 --------VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                   +Y +H  K +  KYS+  +   +EK     +D+S   +M II+ DLK  ++ 
Sbjct: 204 EPIAVAELIYKEHKDKFVNVKYSATKI--EDEKVFDFFRDFSKTELMNIIKKDLKDFSVH 261

Query: 256 HDIFISEDDFHRG---DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            D +  E   +     DP+     I  L +  YVYE                    L  +
Sbjct: 262 FDRYFPESKIYEMKLVDPT-----IKKLGK--YVYEK----------------DGALWLK 298

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-----DNMIYVMGSDHSGYVKRL 367
           +T  GDD DR ++KSD S+TYF  D+AY   K  R       D +  + G+DH+ YV R+
Sbjct: 299 TTEFGDDKDRVIVKSDKSFTYFMPDIAYHDIKATRTINGLKTDKIFNIWGADHASYVDRM 358

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                 +  KK  ++V++ ++V+L ++G   KMSKR+G+ +TLR +++ +G D+ R+ ++
Sbjct: 359 TVALQCLGFKKDIMHVIVMQMVKLTKNGKEFKMSKRSGNSLTLRDLINAIGVDNSRWELI 418

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD---LDFDLFPRNV 484
            +     ++ D  K       + + YV YAY+R + I  + + +  +    + DL     
Sbjct: 419 SQAAESHIEIDVEKFTSADSTSNLSYVLYAYSRIQKILEKNESLLKESKSYNTDLLT--- 475

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E  +I  L  YP+ I N   + E +K+  +LY LA++ H ++S       
Sbjct: 476 -------NLKEKDMIAMLFYYPQTIANIAKSYEVHKIPIFLYTLANLLHSYYS------E 522

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           ++ +  +N++L + RL L+  V  +I +GL ++ +E+
Sbjct: 523 VKIIDESNKELLIQRLHLLQCVNQVIKNGLKLLDIEA 559


>gi|54019981|ref|YP_115527.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81378818|sp|Q602D8|SYR_MYCH2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53987154|gb|AAV27355.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 534

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/567 (30%), Positives = 308/567 (54%), Gaps = 56/567 (9%)

Query: 23  KVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79
           K E  I+D  +++IE+ ++   G  S+N A+I ++   +D L +A+ I  ++   + +++
Sbjct: 14  KNENLIIDESKLIIEKSKN--FGDYSSNVALIFAKQNKIDSLKLAQTIKNQLLSENLNLE 71

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
            + IA  GFIN ++S +    I+S I+  G  +GR  + K  K+N+EFVSANPTG +H+G
Sbjct: 72  KIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLEFVSANPTGFLHLG 129

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV+GD LA+++ FSG  V REYYIND G+QI+ L  SVF RYQQ        LPE 
Sbjct: 130 HLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVGSVFSRYQQIF--KKFPLPEE 187

Query: 200 YYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            Y G  +    ++    Y+++  N    + +   I ++ S++  +  I+ DL  L+I+ D
Sbjct: 188 AYLGEDIIWCAQKFFQIYANKFENSSLDDLEAYKIFREKSIEIFLDEIKADLANLSIKFD 247

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +F SE +  R +      +  NLA   +VY+                  + +  +++  G
Sbjct: 248 VFSSESELFRTEK-----VQKNLANLPFVYK----------------KEEAIWLKTSKFG 286

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVS 375
           D  DR L+K +G +TYF++D+AY   K    F  D +I + G+DH GYV R++A    V+
Sbjct: 287 DQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIGYVDRMKAALKTVN 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
             + ++++LL +LV+L+++G   KMSKR G   T++ +++ V  D++R+ +  R  + L+
Sbjct: 347 LNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAIRYFISERSYNSLV 405

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           +FD     + S +NP+F +QYA+AR   +   +          + P   +  E+E   +E
Sbjct: 406 EFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIAPEKKLKFEAE---NE 453

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             LI  L ++  ++   T   +   L  YL +LA++F+  +S+ +       +  N  + 
Sbjct: 454 TILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNSK-------IIGNQNQN 506

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582
           ++  L L  AV  ++ +GL ++G+++ 
Sbjct: 507 SL--LSLTKAVQIVLKNGLKLLGIKAK 531


>gi|315638909|ref|ZP_07894081.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481127|gb|EFU71759.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 530

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 169/560 (30%), Positives = 278/560 (49%), Gaps = 43/560 (7%)

Query: 27  KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           KIL R  ++E P+D A  H +T  A  L++     P  IA  +  + +     + V  A 
Sbjct: 11  KILGRDFILENPKDKALAHFATPLAFSLAKEFKKAPALIAADLALKFEDHFYFEKV-EAV 69

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            G++N  LS ++L  +    +    E+G+    K     +E+VSANPTGP+H+GH R A+
Sbjct: 70  NGYLNFRLSKAFLDTLAKKALKQPDEFGKGK-AKNESFLLEYVSANPTGPLHIGHARGAI 128

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GDTLA +    GY+   EYY+NDAG QI+ L LSV  + +    N + + PE  Y G Y
Sbjct: 129 FGDTLARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILCLNEELEYPENAYKGEY 188

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           +  + +E    +  +         L     ++   M+ +I+ +L   NI  D ++SE  +
Sbjct: 189 IDDLAREAFANFEKDFFTMDNVSNLAF---WAKDKMLDLIKQNLAQANIIIDHYVSERSY 245

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +    + + D I +L   G VYE                   ++   S++ GD+ DR ++
Sbjct: 246 Y----NALEDTIRSLKAHGGVYE----------------KDYKIWLASSLKGDEKDRVIV 285

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           + DG  TY AAD+ Y K K  RG+D  I + G+DH GY+ R++A    +      + ++L
Sbjct: 286 RDDGRGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIPRMKAAIEFLGFNPQNLEIIL 345

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L +D  P KMSKRAG+FI +  ++DE+GSD++RF+ L +K    L+FD   +K++
Sbjct: 346 AQMVSLLKDNQPYKMSKRAGNFILMSEILDEIGSDALRFIFLSKKCDTHLEFDIDILKKE 405

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              NP+FY+ YA+AR + IF +A     D+        V    S  +     L+      
Sbjct: 406 DSSNPIFYINYAHARVKQIFLKAGKSLDDV--------VEADLSNLNDEATNLLFEALNL 457

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+ +A   +   K+  YL  LA+ FH  +   R       V     + ++  L+L   
Sbjct: 458 GSVLNDAFEQRALQKIPDYLKGLAASFHKFYYENR-------VIGTENEDSL--LKLFAL 508

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA  I +G  ++G+ + ++M
Sbjct: 509 VALSIKTGFALMGIRAKDKM 528


>gi|86609400|ref|YP_478162.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109895046|sp|Q2JK96|SYR_SYNJB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86557942|gb|ABD02899.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 598

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 173/574 (30%), Positives = 303/574 (52%), Gaps = 41/574 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           VI+ P D  +G  +    + +++   L P  IA+ +   + + PD+++  +AG G++N  
Sbjct: 45  VIQIPSDPRYGDYACPTPLGMAKLCRLAPAQIAQTLQKHLDL-PDIETQ-VAGGGYLNFR 102

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +L K L  ++  G  +G+  I    ++ +EFVSANPTGP+HVGH R A VG TLA+
Sbjct: 103 LGDPFLAKRLQELLHLGENFGKTAIPHPERILLEFVSANPTGPLHVGHGRWAAVGSTLAN 162

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+ ++G++V RE+YINDAG Q+  L  S+  R +Q L   +  LPE  Y G YL  + + 
Sbjct: 163 LLHWTGHQVEREFYINDAGNQMRLLGQSLEVRVRQ-LQGEEVALPEDAYHGSYLVDIARR 221

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-- 270
           L  +  + +   P    L    D++   M+   +  L+ L  + D + SE   H  DP  
Sbjct: 222 LLGQVKAGIRPLPTT--LEEYTDFAYGEMLAWQKQTLQQLRTEFDHWFSERRLHTPDPQT 279

Query: 271 --SPIRDIIDNLARQGYVYEGILP---PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
             S I+  +  L  +G++Y+   P    PK    +        + F++   GDD DR + 
Sbjct: 280 GLSAIQQALQELQERGFLYKAKAPRGEDPKPGAEEA-------VYFKTQEFGDDKDRVVQ 332

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K+DGS+TY AAD+AY + K +RG+  +I ++GSDH GY+ RL+A   A S    ++ +L+
Sbjct: 333 KADGSFTYLAADIAYHRDKVQRGYHRLINILGSDHHGYIGRLKAAVGAFS-PDVKLEILI 391

Query: 386 CELVRLYR------DGMPIKMSKRAGDFITLRHVVDE----VGSDSVRFMMLWRKNSELL 435
            + V+L++      +   ++MSKR G+F++L  ++++    VG D+ R+ +L       +
Sbjct: 392 GQFVKLFKTDPQTGEKTEVRMSKRTGNFVSLNDLIEDPEIGVGVDAARWFLLSSSMDSPI 451

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           +FD     +Q+ +NPV YV Y++ARC ++ R+ ++   +   +L  +  + ++ +    E
Sbjct: 452 NFDLDLAVKQTFDNPVVYVHYSHARCCTLLRRLQE---EEKVELTNKVPLTEQQKLPYKE 508

Query: 496 ---LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                L++ L   P  +  A   + P+K+  Y   +A+ F+  + + R  P L+     +
Sbjct: 509 PEERALLLRLLALPDELIAAAEERAPHKIIRYAEAIAADFNKFYDNCRILPLLK----ED 564

Query: 553 RKLTMMRLQLVHAVASII-NSGLNIIGVESPNEM 585
             L   R+QLV A   ++ N    I+G+ +P  M
Sbjct: 565 PLLAQARIQLVQATQQVLFNVLTGILGLSAPESM 598


>gi|187251307|ref|YP_001875789.1| arginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|254782964|sp|B2KD56|SYR_ELUMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|186971467|gb|ACC98452.1| Arginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 532

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 176/541 (32%), Positives = 271/541 (50%), Gaps = 48/541 (8%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
           +S   AM  ++ L  +PL IA+  V  I     V S   A  GFIN+ L  S+   I SS
Sbjct: 40  ISLTWAMSAAKTLKKNPLEIAKAAVKVISEVTFVASASYAAPGFINIILEDSF---ISSS 96

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
            +   ++  +       +V IEFVSANPTGP+HV   R A +GD+L  +    G +   E
Sbjct: 97  ALDRRLKNRKTAGENKERVLIEFVSANPTGPLHVASGRGASLGDSLVRIFNALGIQCDSE 156

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           YY+ND+G Q   L +S+  R       N  + PE  Y G YL     E+AD+      ++
Sbjct: 157 YYVNDSGNQAMLLGVSLKARV------NGQEPPENGYHGSYLI----EMADEIREMSKDW 206

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
            EE++      Y+++ ++K  + D++A N+    +  E + ++ +  P +  +D L  +G
Sbjct: 207 TEEQF----SIYAIEYLIKTHQRDMQAFNVNFTRWFRESELYK-ESLPAK-ALDFLKEKG 260

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
             YE                    + F +T   DD DR L+++DG  TYF AD+AY K K
Sbjct: 261 LAYEA----------------DGAVWFGTTKDNDDKDRVLVRADGRPTYFLADIAYHKNK 304

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           Y+RGF  ++ ++G+DH GYV R++A   A+ E +     ++ +LV L   G  +KMSKR+
Sbjct: 305 YDRGFTTLVDILGADHHGYVPRMKAAVKALGENEESFVPIIHQLVHLIEGGEKVKMSKRS 364

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G FITL+ + +EVG+D+ RF+   R     ++FD    K+++ ENPVFYVQY +AR  SI
Sbjct: 365 GRFITLKELTEEVGADACRFLFASRTPDAHMNFDIDLAKKRTNENPVFYVQYVHARAASI 424

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R A+        +L    + PQE         L++ +  +   ++N      P+ L  Y
Sbjct: 425 ARMAEQKHLQQAENLVDFKLTPQER-------TLLIKILWFKHALKNCVRDMSPHHLTTY 477

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L +LA  FH  +         R V  +N + T  RL +   V   I  GL  +GV +P E
Sbjct: 478 LIELAGNFHSFYD------ACRVVDEDNPQTTAHRLLICDRVRERIKKGLEFLGVSAPEE 531

Query: 585 M 585
           M
Sbjct: 532 M 532


>gi|256372578|ref|YP_003110402.1| arginyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009162|gb|ACU54729.1| arginyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 540

 Score =  260 bits (665), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 177/552 (32%), Positives = 275/552 (49%), Gaps = 50/552 (9%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLS 94
           PR+ AHG L+T  A+ L+R +G+ P  +AE +VAR+  ++   V+ + +AG GF+N++LS
Sbjct: 36  PRERAHGDLATPIALELARTVGVAPRVLAEALVARLEPRVAGRVERLEVAGPGFVNIHLS 95

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ L   + ++           +G G +  +EFVSANPTGP+H+G+   ++ GD LA L+
Sbjct: 96  PAALLGDVQAMAADLAAALAVDVGHGARALVEFVSANPTGPLHIGNGWLSIYGDALARLL 155

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           A  G+EV+REYY+ND G QI +L  S+              +PE  Y G Y+     EL+
Sbjct: 156 AHGGFEVSREYYVNDTGGQIRSLGASIL------AARRGEPIPEEGYRGDYVH----ELS 205

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +Y     + P++  +     ++V  ++ +IR  L+ LNI  D + S+     G      
Sbjct: 206 GRY-----DGPDD--VVAAGSWAVPEILAMIRATLEELNIHFDSWYSQAAIEGG------ 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
                    G V E +        T + D     L F +   GD  DR L K++G YTY 
Sbjct: 253 ---------GLVEEVVARLSALDATYEAD---GALWFAAERFGDTRDRVLRKANGDYTYL 300

Query: 335 AADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           A D+AY   K   RGFD  I V G+DH G V  L A   A+     ++ + L ++V L  
Sbjct: 301 AGDIAYHYDKLVVRGFDLAIDVFGADHHGQVASLHAAMRALGIDDRRLEIRLGQMVSLLD 360

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +G  +K SKRAG  I L  +V E+G+D+ R + L          D  K + +S ENPV+Y
Sbjct: 361 NGAAVKFSKRAGTAIALSWLVKELGADATRLLALSSSIDRASQVDLVKARAESSENPVYY 420

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYA+AR  ++ RQA  +   LD    P   +         EL+L   L    RV+E A 
Sbjct: 421 IQYAHARVAALRRQAAAMGLALD----PAASLTALGH--PRELELARVLLRLNRVLETAI 474

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + P+++  +L + AS FHG +    + P    +   +  +   R  L      ++   
Sbjct: 475 VERAPHRVVAWLLEAASAFHGFY---HDCP---ILVEPDPLVRGARFALADLTGQVLART 528

Query: 574 LNIIGVESPNEM 585
           L +IGV +  EM
Sbjct: 529 LALIGVRAVEEM 540


>gi|242309623|ref|ZP_04808778.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523624|gb|EEQ63490.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 521

 Score =  259 bits (663), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 282/565 (49%), Gaps = 54/565 (9%)

Query: 26  KKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           KKI+D       V+E+PRD   GH +       ++ L   P  IA+     ++   ++ S
Sbjct: 6   KKIVDETLGITSVLEQPRDKKFGHFAL-PTFSFAKTLKKSPQEIAQNFAKSLESLEEISS 64

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           + I   G++N +LS  +L       +       +    K   + +E+VSANPTGP+H+GH
Sbjct: 65  INIIN-GYVNFFLSDKFLETCTKDFL-------KPYAPKKETILLEYVSANPTGPLHIGH 116

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A+ GD+L+ +  + GY +  EYYINDAG QI  L  S+++  +        +LPEG 
Sbjct: 117 ARGAIFGDSLSRIGKYLGYSIATEYYINDAGVQIENLGKSIYFAGRHLFLGESYELPEGC 176

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + K+  + +  E+  F     +  +  +    M+  I+ +L  + I  D F+
Sbjct: 177 YKGEYILELAKDAKESFGMEI--FENADSIAKLSLFGKDKMLDEIKSNLAEIGIFFDHFV 234

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE + +    S +  +  N      +YE                   ++  +ST  GD+ 
Sbjct: 235 SEKELYAQWDSTLELLRANNG----IYE----------------QEGKIWLKSTEFGDEK 274

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ +G  TY A D+ Y K K ER F+  I + G+DH GY+ R++A    +  + ++
Sbjct: 275 DRVIVRENGEPTYLAGDIIYHKNKMERNFNQYINIWGADHHGYIARVKAAIEFLGYESSK 334

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + +LL ++V L + G   KMSKRAG+FI ++ VV++VG+D++R + L +K    L+FD  
Sbjct: 335 LEILLSQMVALLKGGEAYKMSKRAGNFILMKDVVEDVGADALRLIFLSKKADTHLEFDVE 394

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +K+Q   NPV+Y+ YA+AR  ++F ++++   +   D          +    S   L+V
Sbjct: 395 DLKKQDSSNPVYYINYAHARIHTLFEKSQNSLDNFTKDF---------TNLSESLRDLLV 445

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
                 +V+E++   + P K+  YL  LA  FH  ++        + +   N K  +  L
Sbjct: 446 LALNLSKVLEDSFTQRNPQKVVEYLRTLAGEFHHFYNEE------KILNTPNEKQILSVL 499

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            +   VA  +N+GL ++G+++   M
Sbjct: 500 SI---VAQSLNAGLALLGIQAKKSM 521


>gi|193216533|ref|YP_001999775.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|238692472|sp|B3PM19|SYR_MYCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193001856|gb|ACF07071.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 541

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 181/571 (31%), Positives = 296/571 (51%), Gaps = 59/571 (10%)

Query: 29  LDRIVIERP----RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVF 82
           L+++ I++P       ++G  STN A+ L + LG   + IA+ IV  I  K   ++  V 
Sbjct: 16  LEKLEIKKPITLTEPKSYGDYSTNLALTLQKELGKPAIEIAKEIVNAIDLKKHKEIVKVE 75

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           +A  GFIN ++S S L  +++SI      YG  +  GKG  VNIEFVSANPTG +H+GH 
Sbjct: 76  VANPGFINFWVSNSVLSDLVNSINSLEDHYGDMSKEGKGA-VNIEFVSANPTGFLHIGHA 134

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R A +G TL +++  +G+ V REYY+ND G Q+N LA SVF RYQQ ++N D  +P+  Y
Sbjct: 135 RNAAIGATLCNVLEKAGHRVVREYYVNDYGNQMNNLAASVFSRYQQ-IFNKDFPMPDDAY 193

Query: 202 PGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            G  +         KY  +  N    E+   + +D+  +  ++ I+ DL    +  D++ 
Sbjct: 194 KGHDMTIFADAFFKKYGDKYRNVAYTEEVKKLFRDFGREIALENIKIDLGRFGVWFDLYT 253

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE                    Q Y  + + P  + +     + D    L  +    DD 
Sbjct: 254 SE-------------------TQQYEKDRVWPVIR-RLKSTYEKDGATWLNTTKGGNDDK 293

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY------ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           DR ++K +G  TY  AD+AY + K+      E+G   +I + G+DHSGYV+R++     +
Sbjct: 294 DRVIIKGNGESTYMCADIAYHEQKFVELHDPEKG--KIIDIWGADHSGYVERIKFSFEDL 351

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             ++ QI +LL +L+R+ ++G  IKMSKR G  +TLR ++D VG D+VR+ ++ R  +  
Sbjct: 352 GWRRDQIEILLFQLLRVVKNGKEIKMSKRLGTSLTLRELLDLVGKDAVRYFLIERSYNSK 411

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +DFD  KV++  + NP+F ++YA+ARC  +  +A+            +N I    E D +
Sbjct: 412 IDFDINKVQKSDETNPLFLIKYAHARCYQLLEKAQ-----------IKNPIASNLENDFA 460

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           + +L   L EYP +I+      +   L  YL  LA  F+  +S+         V+ +   
Sbjct: 461 Q-KLTNELKEYPNLIDTMAKTYKVNLLPPYLLKLAGAFNSFYSN---------VRISGDP 510

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                L LV A   ++ + + ++ ++ PN+M
Sbjct: 511 NEQSYLALVKATKIVLANAMKLMDLDIPNKM 541


>gi|116327967|ref|YP_797687.1| arginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330848|ref|YP_800566.1| arginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281398|sp|Q04TG2|SYR_LEPBJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122284241|sp|Q052J1|SYR_LEPBL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116120711|gb|ABJ78754.1| Arginine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124537|gb|ABJ75808.1| Arginine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 586

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 188/590 (31%), Positives = 294/590 (49%), Gaps = 64/590 (10%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVF 82
           VEK  L RI IE  RD   G  ST+ ++  S+ L  +P+ +++ +V  ++   D+ + V 
Sbjct: 29  VEKSSL-RIKIEYSRDEKFGDYSTSFSLENSKLLKRNPIQVSKELVEILQKRTDLFEKVD 87

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
               GF+N  +SPSYL + +   ++SG  + +  +    K+N+EFVSANPTGP+++   R
Sbjct: 88  FTPPGFVNFKISPSYLLEYIEKSILSGDHFPK--VEHPLKINLEFVSANPTGPLNIVSAR 145

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY----------QQALYNN 192
            A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R           Q+A    
Sbjct: 146 AAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIREIKGEFSTRQEADDTT 205

Query: 193 DSD-------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEK----WLPIVKDYSVQ 239
             D       LP   Y G Y+K +   L +  K SS++    +EK       +   ++V+
Sbjct: 206 PIDTILEKNILPAEGYRGEYIKDIANALLNEPKKSSQIETLLKEKKYRELAELCSIWTVE 265

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R DL +  ++ D +  E   H  D   +  ++ +L R G ++E           
Sbjct: 266 NNLDWQRKDLDSFGVEFDNYFRERTLHESDK--VLAVMKDLERVGKIFE----------- 312

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +  + +FRST  GDD DR +++ DG  TY  AD+AY K K ERG+D +  + G D
Sbjct: 313 -----EDGKKIFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDRIYDIWGPD 367

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---DE 416
           H GY+ RL      +  KK    V++ + V L   G  +KMSKRAG F T+  ++    +
Sbjct: 368 HHGYISRLSGAVQTLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLGK 427

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            G D  R+  + R     LDFD    ++QS +NPVFY+QYA+AR  SIFR+         
Sbjct: 428 HGKDVGRYFFVMRSLDAPLDFDLDLAQDQSDKNPVFYLQYAHARICSIFREVGT------ 481

Query: 477 FDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                 +    ES E      +L+  +A +P  I ++  + EP+++A YL   A  F G 
Sbjct: 482 ----ESSAEAAESLEMSEERKRLLFWIARFPEEIFDSANSMEPHRVANYLQSFAKAFTGF 537

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    +N RL+      R L + R+ L  A  S++  GL +IGV +P +M
Sbjct: 538 YLG--KNNRLKDATPEVR-LGLARICL--AARSVLAEGLGLIGVSAPEKM 582


>gi|308189960|ref|YP_003922891.1| hypothetical protein MFE_04110 [Mycoplasma fermentans JER]
 gi|319777242|ref|YP_004136893.1| arginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624702|gb|ADN69007.1| hypothetical protein MFE_04110 [Mycoplasma fermentans JER]
 gi|318038317|gb|ADV34516.1| Arginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 542

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 56/578 (9%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK- 73
           LK I  K+ +EK   D ++IE P+       ++N A+      G +P+ +A+ IV  ++ 
Sbjct: 14  LKPILNKLGIEK---DDLLIE-PK--VKADFASNVAL---GNKGKNPMELAKKIVKELEP 64

Query: 74  --IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 + SV IA  GF+N Y+    + K L+ I+     +GR  + KG  +NIE+VSAN
Sbjct: 65  KLTSLGLKSVEIAAPGFLNFYIDDQTIIKSLNQIIKQNENFGRGKL-KGN-LNIEWVSAN 122

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A +G  L ++  F+G  V REYYIND G QINTLA S+F RY+Q  Y 
Sbjct: 123 PTGYLHIGHARNAAIGSALYNICTFAGLNVLREYYINDGGNQINTLAQSIFARYKQ-FYE 181

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDL 249
            D  +PE  Y G  +    +++  K+  +  +  E  ++ L + K   V   +K I+ DL
Sbjct: 182 PDFPMPEDCYGGQDIVWNAEQIRTKHGDKFKDLKELNDEALKVFKKEGVANFLKQIKVDL 241

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K      DI+ SE   +  +   I D I  L +  +  +G                    
Sbjct: 242 KKFKCGFDIWFSEKTLYANNSKRILDTIKKL-KNHFEADG------------------AT 282

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY-VMGSDHSGYVKRL 367
             R+T  GDD DR ++KS+G +TYFA D+AY   K++  G D +I  + G+DH  Y+ R+
Sbjct: 283 WLRTTKYGDDKDRVVIKSNGDFTYFAPDIAYHDKKFKNSGKDPIIMNIWGADHLSYITRM 342

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +     +     ++ VL  +LVRL +DG   KMSKR G    LR  VD VG DS RF++L
Sbjct: 343 KIAMQDLGYDPNKLIVLCLQLVRLMKDGQEYKMSKRKGTSFWLRDFVDLVGVDSARFILL 402

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R  +  LDFD      +S +NPVF +QYA AR   + +++K        D+        
Sbjct: 403 DRTYNSKLDFDINIATSKSNDNPVFLIQYANARSYQLLKKSK-------LDVSKLKATNI 455

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++E D    +L+  L E+P VI ++      + L  YL  +A  F+  +S+       + 
Sbjct: 456 DNELDK---KLVSTLLEFPEVIISSATKYLTHLLTQYLIRVAKEFNSWYSNTE-----KI 507

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + N    M  L +  AV  ++ +GL ++GV S ++M
Sbjct: 508 IGSKNE---MNSLTIARAVNIVLENGLRLLGVSSKHKM 542


>gi|225550759|ref|ZP_03771708.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379913|gb|EEH02275.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 548

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 175/569 (30%), Positives = 299/569 (52%), Gaps = 59/569 (10%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFI 89
           ++++++ ++   G   TN AM LS+ +    L +A+ I+  +  D D+   V +   GF+
Sbjct: 24  KVLVDKTKNIKFGDFYTNVAMTLSKRVNQSSLVVAKEIINNL--DQDLFFKVNLQPPGFL 81

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L       +L+ I      +G+    K    N+E+VSANPTG +H+ H   A+ GD 
Sbjct: 82  NFTLKAKDHEDLLTQIYDQKDLFGQ-FAKKNITYNVEYVSANPTGYLHIAHAANAIYGDI 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA+L+   GY+V  EY+INDAG QI+ LA+SV  RY Q L N + +LP   Y G  +  V
Sbjct: 141 LANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIELPTDAYHGQEIYLV 199

Query: 210 GKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + L + Y  + +N    +   I        +K ++V  ++  I+ DL ++N   D + S
Sbjct: 200 AQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAVSYLLDEIKKDLASINTYIDTYTS 259

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E+         I +++  + +  Y  +G                   L  R+T  GDD D
Sbjct: 260 ENWIRSS--GRILEVLSKIKQHTYTLDG------------------ALWLRTTAFGDDKD 299

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           R L+KSDGSYTYF  D+AY   K+ +  DN   +I V G+DH GY+ RL+A  +A+    
Sbjct: 300 RVLIKSDGSYTYFTPDIAYHDYKFSK--DNTTKLIDVWGTDHLGYIARLKAAMSALGYDP 357

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLD 436
             + ++  ++++L ++    K+SKR+G  +T++ +V+ +G D++R F+     NS  ++D
Sbjct: 358 NNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVVID 417

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            D    K  +  NP++YVQYA+AR   +    K ++   +FD F  +++      +T E 
Sbjct: 418 VDIALSKNNN--NPLYYVQYAHARANQVLN--KQVY---EFD-FKTDLL-----IETRER 464

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L  Y + I NA   +EP++++ YLYDLA +FH ++++ + N        NN+ L+
Sbjct: 465 ELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANIKINDE------NNKALS 518

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  LV  V  ++ +GL I+ +   ++M
Sbjct: 519 AQRYTLVWCVKQVLANGLAIMKITPYDQM 547


>gi|238809911|dbj|BAH69701.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 550

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 56/578 (9%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK- 73
           LK I  K+ +EK   D ++IE P+       ++N A+      G +P+ +A+ IV  ++ 
Sbjct: 22  LKPILNKLGIEK---DDLLIE-PK--VKADFASNVAL---GNKGKNPMELAKKIVKELEP 72

Query: 74  --IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 + SV IA  GF+N Y+    + K L+ I+     +GR  + KG  +NIE+VSAN
Sbjct: 73  KLTSLGLKSVEIAAPGFLNFYIDDQTIIKSLNQIIKQNENFGRGKL-KGN-LNIEWVSAN 130

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A +G  L ++  F+G  V REYYIND G QINTLA S+F RY+Q  Y 
Sbjct: 131 PTGYLHIGHARNAAIGSALYNICTFAGLNVLREYYINDGGNQINTLAQSIFARYKQ-FYE 189

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDL 249
            D  +PE  Y G  +    +++  K+  +  +  E  ++ L + K   V   +K I+ DL
Sbjct: 190 PDFPMPEDCYGGQDIVWNAEQIRTKHGDKFKDLKELNDEALKVFKKEGVANFLKQIKVDL 249

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K      DI+ SE   +  +   I D I  L +  +  +G                    
Sbjct: 250 KKFKCGFDIWFSEKTLYANNSKRILDTIKKL-KNHFEADG------------------AT 290

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY-VMGSDHSGYVKRL 367
             R+T  GDD DR ++KS+G +TYFA D+AY   K++  G D +I  + G+DH  Y+ R+
Sbjct: 291 WLRTTKYGDDKDRVVIKSNGDFTYFAPDIAYHDKKFKNSGKDPIIMNIWGADHLSYITRM 350

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +     +     ++ VL  +LVRL +DG   KMSKR G    LR  VD VG DS RF++L
Sbjct: 351 KIAMQDLGYDPNKLIVLCLQLVRLMKDGQEYKMSKRKGTSFWLRDFVDLVGVDSARFILL 410

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R  +  LDFD      +S +NPVF +QYA AR   + +++K        D+        
Sbjct: 411 DRTYNSKLDFDINIATSKSNDNPVFLIQYANARSYQLLKKSK-------LDVSKLKATNI 463

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++E D    +L+  L E+P VI ++      + L  YL  +A  F+  +S+       + 
Sbjct: 464 DNELDK---KLVSTLLEFPEVIISSATKYLTHLLTQYLIRVAKEFNSWYSNTE-----KI 515

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + N    M  L +  AV  ++ +GL ++GV S ++M
Sbjct: 516 IGSKNE---MNSLTIARAVNIVLENGLRLLGVSSKHKM 550


>gi|50365371|ref|YP_053796.1| arginyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81391744|sp|Q6F0R1|SYR_MESFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50363927|gb|AAT75912.1| arginyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 553

 Score =  257 bits (656), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 182/587 (31%), Positives = 286/587 (48%), Gaps = 49/587 (8%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S +K  LKEI  K  + K   D IV E  ++    H ST  A++ ++ L  +P+ +AE I
Sbjct: 6   SIVKKDLKEIAQKFNISK---DPIV-EINKNNIDSHFSTTLALMSAKELKQNPIQLAENI 61

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +      D + IAG GFIN+ L    L   + +I      YG+N I       IE+V
Sbjct: 62  KNELLQKDYYDQIEIAGPGFINIKLKTELLSTTIKNITTLKEAYGKNKIKNKIIN-IEYV 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +HVGH R AV G  L  ++ F GYEV  E+Y NDAG QIN LA++VF  Y  A
Sbjct: 121 SANPTGFLHVGHARNAVTGSVLEEVLKFDGYEVQTEFYTNDAGNQINILAVTVFVHYLWA 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAM 241
           L   +++ P   Y G +   +   +  KY  +  N         +E+   I +  +VQ  
Sbjct: 181 L-GIETEKPANTYGGTFYDDLANIMIQKYGDKFKNLTFTETAISDEETHQIFRKEAVQHF 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I+  LK   +  D + SE + +  D + I  ++     +   YE             
Sbjct: 240 LTEIKQQLKDFGVVIDHYSSEQEMY--DTNQIEKLLKEYKEKNATYEA------------ 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDH 360
                  L  ++T  GDD DR L+K DGS TY   DLA    + +R   D +I + G DH
Sbjct: 286 ----DGALWLKTTEFGDDKDRVLVKKDGSLTYIVPDLATHNIRIQRTHADVLINIWGGDH 341

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ R+ A    +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D
Sbjct: 342 HGYIPRMRAGLQLLGHNPDILEIEMVQMVRLIKDGKEYKMSKRKGTAVWLVDIMEMVGKD 401

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFD 478
           ++R+M+  + +S  +D D   V++++  NPV+Y QYA ARC SI  QA  K+I  +L+  
Sbjct: 402 ALRYMLASKSSSSHMDLDLDLVQQKNATNPVYYAQYATARCHSILNQADQKNIKANLNVS 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               N           E++L++ L  + +VI+ +   + P  +  Y+  +   FH +++ 
Sbjct: 462 NLLSN---------KKEVELLLTLDNFNQVIQMSAKNRAPQLICEYIQTVCKQFHSYYA- 511

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  N+   +  RL LV +V  ++ +  NIIGV +   M
Sbjct: 512 -----DTKILDENDVPTSEARLGLVLSVLQVLTNAFNIIGVSALETM 553


>gi|15828714|ref|NP_326074.1| arginyl-tRNA synthetase (arginine--tRNA ligase) (ArgRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089656|emb|CAC13416.1| ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS) [Mycoplasma
           pulmonis]
          Length = 534

 Score =  256 bits (654), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 160/492 (32%), Positives = 262/492 (53%), Gaps = 34/492 (6%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N  MI+ +   L   T+ EL   + + +  ++   I   GF+NL+L+      ++  I+ 
Sbjct: 38  NILMIVQKKNKLSLETLQELFEDKFE-NEYIEKFEILNPGFLNLFLNDLAFESLVLEILN 96

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               YGR L      +NIEFVSANPTG +H+GH R A  G  LA+ + FSGY VT+EYYI
Sbjct: 97  QNQNYGR-LEKNNQNINIEFVSANPTGFLHIGHVRNACYGQILANTLDFSGYNVTKEYYI 155

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           NDAG+QI TLA S+++R ++ L N +   P+  Y G  + +  K+L +K++S++     E
Sbjct: 156 NDAGSQIETLAYSIYFRARELL-NLEVKAPQEMYRGNDIVYGAKQLIEKFTSQIFEKDYE 214

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-SPIRDIIDNLARQGYV 286
           +    +K+ S +  ++ I++ L  + +  DIF SE   +  +   PI   ++N     Y 
Sbjct: 215 EIKEFLKEESTKIFLEKIKEHLNLIGVNFDIFFSEKSLYEENKIEPILKALEN-----YT 269

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           YE                    L  +++  GDD DR L KSDGS TYF  D+AY   K++
Sbjct: 270 YE----------------KENALWLKTSHFGDDKDRVLRKSDGSLTYFTPDIAYHNIKHQ 313

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           R   ++I V G+DHSGY+KRL      +S++K ++  +  +LV+L ++   +KMSKR G 
Sbjct: 314 RNNSSLINVWGADHSGYIKRLSIAYEMISKQKVKVETI--QLVKLTKNNQELKMSKRMGT 371

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
             TL  + + VG D++RF M  R N+  L FD   + +   EN ++ ++Y YAR   +  
Sbjct: 372 SFTLIELYEIVGKDAIRFYMNSRSNNSALVFDIDAILKNDSENYIYTIKYTYARAFQLLL 431

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A++       +L  +     ++EF  +   LI  + E+P +I   + + + + L  YL 
Sbjct: 432 KAQEN----SINLSKKASQSYQNEFVKN---LIKKMVEFPSLIVQISQSFKTHLLNQYLI 484

Query: 527 DLASVFHGHWSH 538
           DL + F+  +S+
Sbjct: 485 DLVTTFNSFYSN 496


>gi|32266208|ref|NP_860240.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81666101|sp|Q7VI99|SYR_HELHP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|32262258|gb|AAP77306.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 548

 Score =  256 bits (653), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 279/523 (53%), Gaps = 51/523 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV+ERP++   GH +T  A+ L++    +P  IAE I   +    + + V     GF+NL
Sbjct: 21  IVLERPKNKDLGHFATPLALSLAKIEKTNPKLIAEEIAKILTNYAEFEKVETLN-GFVNL 79

Query: 92  YLSPSYLRKILS------------SIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHV 138
            LS ++L+ I              SI  +  +Y  +  I     + IEFVSANPTGP+H+
Sbjct: 80  TLSTTFLQHIAQKQLQHCMTLEADSINPNISQYTQKTQITPKEHILIEFVSANPTGPLHI 139

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R AV GD L  +  F GY++  EYYINDAGAQI  L LS+F   ++ +     + P+
Sbjct: 140 GHARGAVYGDALTRVGRFLGYDILTEYYINDAGAQIYMLGLSIFLAGREHILKTQVEYPQ 199

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            YY G Y+  + K+ A  +  ++  F  E  +  + D+    M++ I+D+L  + I+ D 
Sbjct: 200 SYYKGEYIIDLAKQCALHFGEDV--FKSEDSISSLADFGKDMMLQEIKDNLAQVGIKFDS 257

Query: 259 FISEDDFHRGDPSPIRDIIDNL-ARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           F+SE   +       +D +D L + QG Y  +G                  ++   S+ +
Sbjct: 258 FVSEKSLY----DRWQDTLDTLKSHQGIYTKDG------------------KIWIASSQI 295

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
            D+ DR +++ +G  TY A D+ Y + K+ R F++ I + G+DH GY+ R++A    +  
Sbjct: 296 NDEKDRVVVRENGEPTYLAGDIIYHQDKFHRHFEHYINIWGADHHGYIARVKAAIHFLGY 355

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            + ++ VLL ++V L + G P KMSKRAG+FI ++ V++++G+D++RF+ L +K    L+
Sbjct: 356 DENKLEVLLSQMVSLLKGGQPYKMSKRAGNFILMKDVIEDIGADALRFIFLSKKPDTHLE 415

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  ++K++   NP++Y+ YA AR  ++F +A      ++     +N     ++ D +E 
Sbjct: 416 FDVDELKKEDGSNPIYYINYANARIHTLFNKA-----GVNMQQTAQNA----NKLDINEQ 466

Query: 497 --QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              L+       ++IE++   +E  K+  YL  L++ FH  ++
Sbjct: 467 AKALLFEALCLQQIIESSFRNREIQKICDYLKSLSASFHSFYN 509


>gi|86607336|ref|YP_476099.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|109895045|sp|Q2JRC3|SYR_SYNJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86555878|gb|ABD00836.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 598

 Score =  256 bits (653), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 172/577 (29%), Positives = 300/577 (51%), Gaps = 47/577 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            I+ P D  +G  +    + +++   + P  IA+ +   + + P + +  +AG G++N  
Sbjct: 45  TIQIPSDPRYGDYACPTPLGMAKLCRMAPAQIAQTLQKHLDL-PGI-ATEVAGGGYLNFR 102

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  S+L + L  ++  G ++G+       ++ +E+VSANPTGP+HVGH R A VG TLA+
Sbjct: 103 LGDSFLAERLQELLRLGEDFGKTAAPHPERILLEYVSANPTGPLHVGHGRWAAVGSTLAN 162

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+ ++G++V RE+YINDAG Q+  L  S+  R +Q L   +  LPE  Y G YL  + + 
Sbjct: 163 LLRWTGHQVEREFYINDAGNQMRLLGQSLEVRVRQ-LQGEEVALPEDAYHGSYLVDIARR 221

Query: 213 LADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           L D+  +    L   PEE       D++   M+   +  L+ L  + D + SE   H  D
Sbjct: 222 LLDQVKAGIRPLPTTPEE-----YTDFAYAEMLAWQKQTLQQLRTEFDHWFSERRLHAPD 276

Query: 270 P----SPIRDIIDNLARQGYVYEGILP---PPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           P    S I+  +  L  +G++Y    P    PK    +        + F++   GDD DR
Sbjct: 277 PQTGLSAIQQALQELQERGFLYRAKAPRGEDPKPGAEEA-------VYFKTQEFGDDKDR 329

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            + K+DGS+TY AAD+AY + K  RG+  +I ++GSDH GY+ RL A   A S    ++ 
Sbjct: 330 VVQKADGSFTYLAADIAYHRDKVRRGYQRLINILGSDHHGYIGRLHAAVGAFS-PDVKLE 388

Query: 383 VLLCELVRLYR------DGMPIKMSKRAGDFITLRHVVDE----VGSDSVRFMMLWRKNS 432
           +L+ + V+L++      +   ++MSKR G+F++L  ++D+    VG D+ R+ +L     
Sbjct: 389 ILIGQFVKLFKTDPETGEKTEVRMSKRTGNFVSLNDLIDDPEIGVGVDAARWFLLSSSMD 448

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             ++FD     +Q+ +NPV YV Y++ARC ++ R+ ++   +   +L  +  + ++ +  
Sbjct: 449 SPINFDLDLAVKQTFDNPVVYVHYSHARCCTLLRRLQE---EEKVELTNKVTLTEQQKLP 505

Query: 493 TSE---LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             E     L++ L   P  +  A   + P+K+  Y   +A+ F+  + + R  P L+   
Sbjct: 506 YQEPEERALLLRLLALPDELIAAAEERAPHKIIRYAEAIAADFNKFYDNCRILPLLK--- 562

Query: 550 ANNRKLTMMRLQLVHAVASII-NSGLNIIGVESPNEM 585
             +  L   R+QLV A   ++ N    I+G+ +P  M
Sbjct: 563 -EDPLLAQARIQLVQATRQVLFNVLTGILGLSAPESM 598


>gi|291276464|ref|YP_003516236.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963658|emb|CBG39490.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 537

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 271/521 (52%), Gaps = 49/521 (9%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---------IDPDVD--- 79
           I +E P++   GH +T  A  L++     P  IAE +  + +         ++ D++   
Sbjct: 18  ITLEMPKNKDFGHYATPIAFTLAKTYKKSPALIAEELAKKCEDIRIQDTEILERDIEVFE 77

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
            V + G G+INL L  ++L  + +  + +          K  ++ +E+VSANPTGP+H+G
Sbjct: 78  KVEVIG-GYINLTLCHAFLESMANKTLKAPRREP-----KKKRILLEYVSANPTGPLHIG 131

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R A+ GD+LA +  F GY++  EYYINDAGAQI  L LS+    Q+ L     + PE 
Sbjct: 132 HARGAIFGDSLAKIGKFLGYDIKTEYYINDAGAQIQMLGLSIMLAGQEHLLKQTVEYPEN 191

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            Y G Y+  + K   +++ +++ +    + +P + ++    M++ I+ +L+ + I  D F
Sbjct: 192 SYKGEYIIDLAKLAQERFGNDVFS---AQHIPELSNFGKDLMLEEIKSNLEEVGITFDFF 248

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           +SE + +    S +  +  N A    +YE                  ++   +S   GD+
Sbjct: 249 VSEKELYEEWDSTLSLLQKNDA----IYE----------------KDQKFWLKSQQFGDE 288

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR +++ DG  TY A D+ Y   K+ RG+D+ I + G+DH GY+ R+ A    +     
Sbjct: 289 KDRVIIRDDGEPTYLAGDIIYHNDKFARGYDSYINIWGADHHGYINRVLASLEHLGFDSK 348

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ ++L ++V L +DG P KMSKRAG+FI ++ VV ++G D++RF  L +K    L+FD 
Sbjct: 349 KLKIILAQMVSLLKDGQPYKMSKRAGNFILMKDVVADIGVDALRFTFLSKKLDTALEFDI 408

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +K+Q   NP+FY+ YA AR  ++F + +  +   +  L  RN+  Q++        L+
Sbjct: 409 KDLKKQDSSNPIFYINYANARIHTLFEKCEKHYNFANISL--RNLENQDA------YDLL 460

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               +  RV+ENA       K+  YL  +A  FH  +++ R
Sbjct: 461 FQALQLQRVLENAFEEYALQKVCEYLRGIAVSFHTFYNNYR 501


>gi|57505428|ref|ZP_00371356.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016253|gb|EAL53039.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 530

 Score =  254 bits (649), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 171/560 (30%), Positives = 276/560 (49%), Gaps = 43/560 (7%)

Query: 27  KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           KIL R  ++E P+D A  H +T  A  L++     P  IA  +  + +     + V  A 
Sbjct: 11  KILGRDFILENPKDKALAHFATPLAFSLAKEFKKAPALIAADLALKFEDHFYFEKV-EAV 69

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            G++N  LS ++L  +    +    E+G+    K     +E+VSANPTGP+H+GH R A+
Sbjct: 70  NGYLNFRLSKAFLDFLAKKALKQPDEFGKGK-AKNESFLLEYVSANPTGPLHIGHARGAI 128

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GDTLA +    GY+   EYY+NDAG QI+ L LSV  + +    N + + PE  Y G Y
Sbjct: 129 FGDTLARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILYLNEELEYPENAYKGEY 188

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           +  +  E    +  +         L     ++   M+ +I+ +L   NI  D ++SE  +
Sbjct: 189 IDDLACEAFANFEKDFFTMDNVSNLAF---WAKDKMLDLIKQNLAQANIIIDHYVSERSY 245

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +    + + D I +L   G VYE                D K +   S++ GD+ DR ++
Sbjct: 246 Y----NTLEDTIRSLKAHGGVYE---------------RDYK-IWLASSLKGDEKDRVIV 285

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           + DG  TY AAD+ Y K K  RG+D  I + G+DH GY+ R++A    +      + ++L
Sbjct: 286 RDDGRGTYLAADIVYHKDKMGRGYDKCINIWGADHHGYIPRMKAAIEFLGFNPQNLEIIL 345

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L +D  P KMSKRAG+FI +  ++DE+GSD++RF+ L +K    L+FD   +K++
Sbjct: 346 AQMVSLLKDNQPYKMSKRAGNFILMSEILDEIGSDALRFIFLSKKCDTHLEFDIDILKKE 405

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              NP+FY+ YA+AR + IF +A     D+        V    S  +     L+      
Sbjct: 406 DNSNPIFYINYAHARVKQIFLKAGKSLDDV--------VEADLSNLNDEATNLLFEALNL 457

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+ +A   +   K+  YL  LA+ FH  +   R       V     + ++  L+L   
Sbjct: 458 GSVLNDAFEQRALQKIPDYLKGLATSFHKFYYENR-------VIGTENEDSL--LKLFAL 508

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA  I  G  ++G+   ++M
Sbjct: 509 VALSIKIGFALMGIRVKDKM 528


>gi|145220535|ref|YP_001131244.1| arginyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189083541|sp|A4SGY3|SYR_PROVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145206699|gb|ABP37742.1| arginyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 552

 Score =  253 bits (647), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 173/571 (30%), Positives = 291/571 (50%), Gaps = 59/571 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           + IE+P     GH STN A + ++ LG +P T+A+ ++  ++     ++   +AG GFIN
Sbjct: 24  VQIEKPASAKFGHFSTNIAFLSAKELGKNPRTLAQELIGHLRFPSGSIEKTEVAGPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L+P ++   L  ++  G  +GR   G G K  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FFLTPPFIMDSLGEVLRQGEAFGRGTSGNGEKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L    GY VTREYY NDAG Q+  L  SV +RY +       D P+ +Y G Y+    
Sbjct: 144 ANLFEAEGYSVTREYYFNDAGRQMQILGESVRFRYLERC-GRKVDFPDTHYQGGYI---- 198

Query: 211 KELADK-YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++AD+ Y  +  +  + +     K  +   +   I+  L+ L I+HD F +E   +  D
Sbjct: 199 GDIADRIYQEQGDSLADAEGTGEFKSTAEAIIFSSIKKTLERLGIRHDSFFNEHTLYTPD 258

Query: 270 PS-PIRD--IIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +   R+  +ID L ++G++  YEG                     F +T +G + ++ L
Sbjct: 259 ENGATRNSRVIDALRQKGFIDEYEG------------------ATWFLTTKLGQEKNKVL 300

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
           +KS G  +Y   D+AY   KY+RGF  ++ V G+DH   Y   +EA+   +    ++I +
Sbjct: 301 VKSTGEPSYRLPDIAYHLTKYDRGFGVIVNVFGADHIDEYPDVIEAL-KILGHDTSRIRI 359

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            + + V    DG  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    +
Sbjct: 360 AINQFVTTTVDGETVKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDVDLAR 419

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI---- 499
           +QSK+NPVFY+QYA+AR  S+ R A           +  N    E   D + L+ +    
Sbjct: 420 KQSKDNPVFYLQYAHARICSLLRMA-----------WSENGFNPEKLPDLALLKTLSSPE 468

Query: 500 -----VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
                + L ++P ++ +A    EP K+  Y++ +A ++H  +   +E P L+  +A+   
Sbjct: 469 ELQLALALLDFPDMVRSALRLLEPQKMVDYMHSIAELYHRFY---QECPILK-AEADTAN 524

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               RL L  A   ++ +G  I+G+ +P  M
Sbjct: 525 ---ARLLLSLATRQVLQNGFRILGISAPESM 552


>gi|167844056|ref|ZP_02469564.1| arginyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 481

 Score =  253 bits (645), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 166/510 (32%), Positives = 258/510 (50%), Gaps = 58/510 (11%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           ++  G  +G +    G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE
Sbjct: 1   MLAQGRAFGASERDHGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHRE 60

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYS 218
           +Y NDAG QI  LA+S   R  + L   D+  PE  Y G Y+  +      G+ +A    
Sbjct: 61  FYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDG 119

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +    + + L  ++ ++V  + +    DLKA  ++ D +  E   +      +   +D
Sbjct: 120 EPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVD 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G  YE                    L  R+T  GDD DR + K+DG+YTYF  D+
Sbjct: 178 ALIAAGMTYE----------------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDV 221

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGM 396
           AY   K+ERGF  +I + GSDH G + R+ A      +   K   + +L ++V + RDG 
Sbjct: 222 AYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQ 281

Query: 397 PIKMSKRAGDFITLRHVV-----------------DEV----GSDSVRFMMLWRKNSELL 435
            +K+SKRAG ++T+R ++                 DE     G D+VRF ++ RK     
Sbjct: 282 EVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEF 341

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD     +Q+ ENPV+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     
Sbjct: 342 VFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QA 398

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + L+  LAEYP V+ +A     P+ +AFYL +LAS FH  ++  R       V  + +  
Sbjct: 399 MALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAP 451

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 452 RTARVALLAATRQVLENGLAMLGVSAPSKM 481


>gi|222143238|pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase
           From Campylobacter Jejuni
          Length = 464

 Score =  253 bits (645), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/462 (32%), Positives = 246/462 (53%), Gaps = 42/462 (9%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+VSANPTGP+H+GH R AV GDTL  L    GY+   EYY+NDAG QI  L LS+   
Sbjct: 34  LEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLS 93

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            ++++ + + + PE YY G Y+  + KE  +K+  E   F EE  +P + D++   M+ +
Sbjct: 94  VKESILHENVEYPEQYYKGEYIVDLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVL 150

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+ +L+   I+ D ++SE  ++      +   +++L     +YE                
Sbjct: 151 IKQNLEQAKIKIDSYVSERSYY----DALNATLESLKEHKGIYE---------------- 190

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
              ++   S+  GD+ DR +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+
Sbjct: 191 QEGKIWLASSQKGDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYI 250

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A    +      + ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R+
Sbjct: 251 PRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRY 310

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN 483
           + L +K    L+FD   ++++   NPV+Y+ YA+AR   +F +A     D +  DL    
Sbjct: 311 IFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---- 366

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +   + L+        V+ +A  A+   K+  YL +LA+ FH  ++   EN 
Sbjct: 367 -----QSLNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENK 418

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +     N+       L+L   VA  I +  +++G+E+ N+M
Sbjct: 419 VVGSANEND------LLKLFSLVALSIKTAFSLMGIEAKNKM 454


>gi|154148135|ref|YP_001406805.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804144|gb|ABS51151.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 525

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/562 (29%), Positives = 288/562 (51%), Gaps = 48/562 (8%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL   I++E+P++    H +   A  L++     P  IAE +  + + +  + +V  A
Sbjct: 10  KKILPYDIILEQPKNKNLAHYACPVAFCLAKEFKKSPKIIAEELADKFR-NSKIFNVS-A 67

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  L   +L +I    + +G  +            +E++SANPTGP+H+GH R A
Sbjct: 68  LNGYLNFKLKAEFLAEISGEALKNGENFASEKEKTSPTTLLEYISANPTGPLHIGHVRGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  +  + GY++  EYYINDAG QI+ L +S+  R ++ L   +   P+ YY G 
Sbjct: 128 VYGDTLQRVSNYLGYKMQTEYYINDAGNQIDLLGISMILRAKE-LAGEEVIYPDKYYRGE 186

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + K   +K+  E+L   +EK L    D++   ++KII+ DL    I+   +ISE  
Sbjct: 187 YIDEILKIAKEKFGDEIL--KDEKKLS---DFAKDEVLKIIKKDLADAGIEISNWISEKS 241

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +    + +   I  L + G +YE                   ++   S   GD+ DR +
Sbjct: 242 LY----NELEGTIKKLEKSGKMYE----------------KEGKIWIASIQNGDEKDRVV 281

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY A D+ Y   K+ER FD+ I + G+DH GYV RL+A    +   + ++ V+
Sbjct: 282 VREDGRPTYLAGDIIYHNNKFERNFDHYINIWGADHHGYVARLKAAINFLGYDENRLEVV 341

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L ++G   KMSKRAG+ + +  +++E+G D++RF+ + +  +  L+FD  ++K+
Sbjct: 342 LMQMVSLLKNGETFKMSKRAGNVVLMSDILEEIGKDALRFIFISKSGNSPLEFDIDELKK 401

Query: 445 QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +   NP+FY+ YA+AR   +F +A K++   +D +             D   L L+    
Sbjct: 402 EDSTNPIFYINYAHARVNQVFGKAGKNVEQIIDENF---------ENLDEDALNLVFEAL 452

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
               ++  A  ++   K+  +L  LA  FH +++        R + ++N      RL++ 
Sbjct: 453 RLNEILNEALKSRSLQKIPDFLKSLAGDFHKYYNEN------RVIGSDNEN---ARLKVF 503

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  I +  +++G+E+  +M
Sbjct: 504 AVVALCIRTAFSLMGLEAKAKM 525


>gi|167892559|ref|ZP_02479961.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 481

 Score =  249 bits (636), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 165/510 (32%), Positives = 257/510 (50%), Gaps = 58/510 (11%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           ++  G  +G +      +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE
Sbjct: 1   MLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHRE 60

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYS 218
           +Y NDAG QI  LA+S   R  + L   D+  PE  Y G Y+  +      G+ +A    
Sbjct: 61  FYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDG 119

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +    + + L  ++ ++V  + +    DLKA  ++ D +  E   +      +   +D
Sbjct: 120 EPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVD 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G  YE                    L  R+T  GDD DR + K+DG+YTYF  D+
Sbjct: 178 ALIAAGMTYE----------------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDV 221

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGM 396
           AY   K+ERGF  +I + GSDH G + R+ A      +   K   + +L ++V + RDG 
Sbjct: 222 AYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQ 281

Query: 397 PIKMSKRAGDFITLRHVV-----------------DEV----GSDSVRFMMLWRKNSELL 435
            +K+SKRAG ++T+R ++                 DE     G D+VRF ++ RK     
Sbjct: 282 EVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEF 341

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD     +Q+ ENPV+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     
Sbjct: 342 VFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QA 398

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + L+  LAEYP V+ +A     P+ +AFYL +LAS FH  ++  R       V  + +  
Sbjct: 399 MALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAP 451

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 452 RTARVALLAATRQVLENGLAMLGVSAPSKM 481


>gi|223038788|ref|ZP_03609080.1| arginyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222879761|gb|EEF14850.1| arginyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 528

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 282/553 (50%), Gaps = 42/553 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +E+P+D    H +      L++ L   P+ IA  + ++ +     ++   A  G+IN  
Sbjct: 18  ALEKPKDKGLAHYAM-PTFSLAKQLKKSPVAIAAELASKFENSEVFEAA--ALNGYINFK 74

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P++L K  S+ + +  E+ +     G K+ +E+VSANPTGP+H+GH R AV GDTLA 
Sbjct: 75  LKPAFLDKFASASLANPSEFAKGGGTSGEKILLEYVSANPTGPLHIGHVRGAVFGDTLAR 134

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +    G  +  EYYINDAG QI  L  S+    ++ L+      PE +Y G Y++ + KE
Sbjct: 135 VGLHIGENIATEYYINDAGNQIELLGTSISLWARENLFGESVAYPEKFYRGDYIEPIAKE 194

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +K+  E+  + E + L +  ++    ++ +I+ +L    I  + + SE  ++      
Sbjct: 195 ALEKFGKEIF-YDESRNLELA-EFGKDRVLVLIKQNLADAQIFIENWASEKSYY----DK 248

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +D L  +  +YE                   ++  +S+ VGD+ DR +++ DG  T
Sbjct: 249 LSLTLDRLKNENGIYE----------------SEGKIWLKSSEVGDEKDRVIVREDGRGT 292

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+ RGFD  I + G+DH GY+ R++A    +   + ++ ++L ++V L 
Sbjct: 293 YLAGDVVYHDDKFRRGFDRCINIWGADHHGYIARMKAALHLLGYDENRLEIILSQMVSLL 352

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +DG   KMSKRAG+ + +  VV+E+G +++RFM L ++    L+FD  ++K +   NP+F
Sbjct: 353 KDGEAYKMSKRAGNVVLMSDVVEEIGCEALRFMFLSKRCDTHLEFDVDELKREDSSNPIF 412

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA+AR   IF +A     D+    F    + +E +       L+        ++ ++
Sbjct: 413 YINYAHARINQIFAKAGKNVADIVGVKFAN--LSEEGK------NLLFEALTLNDILVDS 464

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              +   K+  YL  LA+ FH  ++   EN   R V + N       L+L   VA  I +
Sbjct: 465 FNTRSMNKICDYLKSLAANFHKFYN---EN---RVVGSENEDEL---LKLFAVVALSIKT 515

Query: 573 GLNIIGVESPNEM 585
            L ++GV + ++M
Sbjct: 516 ALGLMGVAAKDKM 528


>gi|269114834|ref|YP_003302597.1| Arginyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322459|emb|CAX37194.1| Arginyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 543

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/570 (30%), Positives = 291/570 (51%), Gaps = 57/570 (10%)

Query: 29  LDRIVIERP----RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVF 82
           L+++ I +P        +G  S+N A+ L + LG   + IA+ IV  I ++   ++  + 
Sbjct: 18  LEKLNISKPIVLTESKNYGDYSSNIALTLQKDLGKKAIDIAQEIVRNIDLNKFKEISEIK 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHC 141
           +A  GFIN ++S S +   ++ I   G  YG  +  GKG  +N+EFVSANPTG +H+GH 
Sbjct: 78  VAEPGFINFWVSNSVIANTINQINNEGSTYGSIDPKGKGA-INVEFVSANPTGYLHIGHA 136

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R A +G TL +++  +G+ V REY +ND G Q+N +A S+F RYQQ ++N +  +PE  Y
Sbjct: 137 RNAAIGATLCNILEKAGHRVVREYLVNDYGNQMNKMADSIFARYQQ-IFNPEFPMPEDSY 195

Query: 202 PGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            G  +    +   + +  E  N    ++   I + +     +K I +D+K   +  DIF 
Sbjct: 196 HGGDMIEFAQAFYNIHKDEYKNVEYTDEIRKIFRSFGRDFALKNIIEDMKKFGVTFDIFT 255

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP-PKSKTTQKCDMDRKQLLFRSTMVG-D 318
           SE                  A Q Y    + P   + KTT K D         +T  G D
Sbjct: 256 SE------------------AEQ-YAKNRVWPAIHRLKTTYKKD---GATWLETTKGGKD 293

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFD---NMIYVMGSDHSGYVKRLEAVAAAVS 375
           D DR ++KS+G  TYF AD+AY + K     D    ++ + G+DHSGYV+R++     + 
Sbjct: 294 DKDRVIIKSNGDSTYFCADIAYHEQKLLELNDPNGKIVDIWGADHSGYVERVKFSFEDLG 353

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            ++ QI +LL +L+R+ ++G  +KMSKR G  +TLR + +EVG+D++R+ ++ R  +  +
Sbjct: 354 HRRDQIEILLFQLIRIMKNGKEVKMSKRLGTSLTLRELAEEVGNDAIRYFLIDRSYNSRI 413

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           DFD  KV + ++ NP++ ++YA+AR   +  +           +   N I  +   +   
Sbjct: 414 DFDINKVTDNNENNPMYIIKYAHARACQLLDK-----------VGIENPIASDELDNEYA 462

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L+  L EYP +I       +   L  YL  L+  F+  +S+ +          N + L
Sbjct: 463 QKLVAELKEYPELISTMAKTYKVNLLPPYLLKLSKAFNSFYSNTK-----VLGSPNEQSL 517

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 LV A   ++  GL ++ +E+P +M
Sbjct: 518 AA----LVKATKIVLADGLKLMDIEAPEKM 543


>gi|332295566|ref|YP_004437489.1| Arginyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178669|gb|AEE14358.1| Arginyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 541

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 174/552 (31%), Positives = 282/552 (51%), Gaps = 46/552 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I I  P+   +G  +  ++M L++ L  DP+ IA  +    K D D  SV +A  GFIN+
Sbjct: 31  IQISNPQ---YGDYTILSSMKLAKHLKEDPIKIANKLAQSFK-DDDF-SVQVANPGFINI 85

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L    L+ IL +  +       N       + IE+VSANPTGP+H+GH R A  GD+L 
Sbjct: 86  SLKEHALQNILQNFTIEPYLNSSN----SKTILIEYVSANPTGPLHIGHARWAAFGDSLT 141

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G+ V  E+Y+N+ G Q+    LS+  R ++ L   D D PEG Y G Y+  + K
Sbjct: 142 RILKDYGFNVQTEFYVNNYGNQMELFTLSIIARMREIL-KQDYDFPEGGYQGEYVVDIAK 200

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++ +KY   L    +     ++K+ ++   +   ++ LK   +  D F  E   H+   +
Sbjct: 201 KILNKYPF-LSKDDQNLHFELIKEEALNIALGEQKETLKNFGVIFDSFFFESSLHQ--EN 257

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I  II+ L  +   Y             K D     L  +++   D  DR L++ +G  
Sbjct: 258 KINKIIELLISKNQTY-------------KKD---GALWLKTSNYFDSEDRVLIRENGLP 301

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFAAD+AY   K++R FD  I + G+DH GY+ RL++   A+   + ++ VLL +LV L
Sbjct: 302 TYFAADIAYHYEKFKRNFDIYINIWGTDHHGYIPRLKSALKALDLPEEKLVVLLGQLVNL 361

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           Y++   I+MSKR G+ ITL+ ++++VG D +RF +  R  +  +DF   K KE + +NP+
Sbjct: 362 YKNKNLIRMSKRTGNMITLKELLEDVGHDILRFYLTSRSLNSTIDFHIEKAKEVTMDNPL 421

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +Y+QYA AR  SI R   +  P  + + + + +   E      E ++I  +  +    E 
Sbjct: 422 YYIQYACARISSIRRNIDEEIP-ANLNEYSKYIKTAE------EYEIIKKIDNFDFFREK 474

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EPY L  Y+ DLA +FH ++   R       +   ++ +   RL L+  V +I++
Sbjct: 475 AVRDYEPYYLVNYMLDLARLFHIYYQKNR-------IINQDKSIQWSRLFLILKVHNILS 527

Query: 572 SG---LNIIGVE 580
            G   LNII +E
Sbjct: 528 RGLSYLNIIPME 539


>gi|237750164|ref|ZP_04580644.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229374351|gb|EEO24742.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 556

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/575 (28%), Positives = 294/575 (51%), Gaps = 48/575 (8%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE-LIVARIKIDPDVDSV-- 81
           ++KI   I +E P+D  HGH +T     L++ L  +P  +A+ L    ++ D D +S   
Sbjct: 16  QEKINLIIALEHPKDKRHGHFATPLCFTLTKILRTNPKVLAQSLQDFFMQYDLDSNSTKP 75

Query: 82  -------FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
                    A  G++NL L+ S+L  +L   + S  ++ +    K TK+ +E+VSANPTG
Sbjct: 76  FKKMFSSIEALNGYLNLTLTHSFLTYMLEVALQSPKDFAKGEC-KNTKILLEYVSANPTG 134

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R A+ G  L  +    GY++  EYY+NDAG+QI+ LALSV+    + L  N  
Sbjct: 135 PLHIGHARGAIFGSVLQRIGKRLGYDIKGEYYVNDAGSQIDMLALSVYNSAAKIL--NLE 192

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKA 251
            L    Y G Y+  V ++    +        + +   I++    Y+   M+++I+++L +
Sbjct: 193 SLSGEVYKGEYIDSVAQDAIKHFGESFFRTADSQKTDILQKIGLYAKDMMLEVIKENLAS 252

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L+I  D F+SE + +           D+  +    +  +L    +            +  
Sbjct: 253 LSIDFDYFVSEKELYTR--------FDDTMKTLETHNALLHQDGA------------IWL 292

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +ST+ GD+ DR L++ +G  TY A D+ Y K K++R +++ I + G+DH GY+ R++A  
Sbjct: 293 QSTLKGDEKDRVLVRDNGMPTYMAGDIIYHKDKFDRDYNHYINIWGADHHGYIARIKASI 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             +      + VLL ++V L +DG P KMSKRAG+FI ++ VV+++G+DS++F+ L +  
Sbjct: 353 DFLGFDSKNLEVLLAQMVSLLKDGQPYKMSKRAGNFILIQDVVNDIGADSLKFVFLSKSL 412

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESE 490
              L+FD   + ++   NPVFY+ YA AR  ++  ++     D++  DL    ++     
Sbjct: 413 DTHLEFDVQDLSKEDSSNPVFYINYANARIHTLLEKSSLSLEDINKTDL--STLLDSNDS 470

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
                +QLI+       V+  +   +   KL  YL +LA  FH  ++  R       +  
Sbjct: 471 LGQDSMQLILQSLGLFYVLNQSYEERALQKLCEYLKNLAKSFHTFYNAHR-------ILQ 523

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  ++++ L+  V+  + +G N++G+    +M
Sbjct: 524 TEHEAGILKIFLL--VSLSLTTGFNMLGINIKTKM 556


>gi|255323529|ref|ZP_05364660.1| arginyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255299566|gb|EET78852.1| arginyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 528

 Score =  247 bits (630), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 285/553 (51%), Gaps = 42/553 (7%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +E+P+D    H +   A  L++ L   P+ IA  + ++ +     ++   A  G+IN  
Sbjct: 18  ALEKPKDKGLAHYAM-PAFSLAKQLKKSPVAIAAELASKFENSEVFEAT--ALNGYINFK 74

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P++L K  S+ + +  E+ +     G K+ +E+VSANPTGP+H+GH R AV GDTLA 
Sbjct: 75  LKPAFLDKFASASLANPSEFAKGGATSGEKILLEYVSANPTGPLHIGHVRGAVFGDTLAR 134

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +    G  +  EYYINDAG QI  L  S+    ++ L+      PE +Y G Y++ + KE
Sbjct: 135 VGLHIGENIATEYYINDAGNQIELLGTSISLWARENLFGQSVAYPEKFYRGDYIEPIAKE 194

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +K+  E+  + E + L +  ++    ++ +I+ +L    I  + + SE  ++  D  P
Sbjct: 195 ALEKFGKEIF-YDESRNLELA-EFGKDRVLVLIKQNLADAQIFIENWASEKSYY--DKLP 250

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   ++ L  +  +YE                   ++  +S+ VGD+ DR +++ DG  T
Sbjct: 251 L--TLERLKSENGIYE----------------SEGKIWLKSSEVGDEKDRVIVREDGRGT 292

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+ RGFD  I + G+DH GY+ R++A    +   + ++ ++L ++V L 
Sbjct: 293 YLAGDVVYHDDKFRRGFDRCINIWGADHHGYIARMKAALHLLGYDENRLEIILSQMVSLL 352

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +DG   KMSKRAG+ + +  VV+E+G +++RF+ L ++    L+FD  ++K +   NP+F
Sbjct: 353 KDGEAYKMSKRAGNVVLMSDVVEEIGYEALRFIFLSKRCDTHLEFDVDELKREDSSNPIF 412

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA+AR   IF +A     D+    F    + ++ +       L+        ++ ++
Sbjct: 413 YINYAHARINQIFAKAGKSVVDVAGVKFEN--LSEDGK------NLLFEALTLNDILVDS 464

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              +   K+  YL  LA+ FH  ++   EN   R V + N       L+L   VA  I +
Sbjct: 465 FNTRAVNKICDYLKSLAANFHKFYN---EN---RVVGSENEDEL---LKLFAVVALSIKT 515

Query: 573 GLNIIGVESPNEM 585
            L ++G+ + ++M
Sbjct: 516 ALGLMGIAAKDKM 528


>gi|294827929|ref|NP_711869.2| arginyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|302393769|sp|Q8F5J3|SYR_LEPIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|293385774|gb|AAN48887.2| arginyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 586

 Score =  246 bits (627), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 179/590 (30%), Positives = 294/590 (49%), Gaps = 62/590 (10%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81
           +VEK+   +I IE  RD   G  ST+ A+  S+ L  +P+ +++ +V  ++   D+ + V
Sbjct: 28  EVEKETF-KIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVEILQKRTDLFEKV 86

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                GF+N  +S S+L   + + V+SG  + +  +    K+N+EFVSANPTGP+++   
Sbjct: 87  DFTPPGFVNFRISTSFLLNYIETSVLSGNYFPK--VDLPLKINLEFVSANPTGPLNIVSA 144

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD- 195
           R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R      ++      +D 
Sbjct: 145 RAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELKGEEGTQQETTDD 204

Query: 196 -----------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKD----YSV 238
                      LP   Y G Y+K +   L    K +  + N  ++K    + +    +++
Sbjct: 205 TPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKYKELAELCAVWTI 264

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R DL A  ++ D + SE   H  D   +  ++ +L + G +++          
Sbjct: 265 ENNLIWQRKDLDAFGVEFDRYFSERTLHEADK--VLSVMKDLEKSGKIFQ---------- 312

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +  + +FRST  GDD DR +++ DG  TY  AD+AY K K ERG+D +  + G 
Sbjct: 313 ------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDKIYDIWGP 366

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---D 415
           DH GY+ RL     ++  KK    V++ + V L   G  +KMSKRAG F T+  ++    
Sbjct: 367 DHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLG 426

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           + G D  R+  + R     LDFD    K++S +NPVFY+QYA+AR  SIF++  D     
Sbjct: 427 KHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICSIFKEVGDQTSK- 485

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                    I + SE      +L+  +A +P  I ++  A EP+++  YL   A  F   
Sbjct: 486 -----EATAILEMSE---ERKRLLFWIARFPEEIFDSANAMEPHRVTNYLQSFAKAFTSF 537

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   ++N RL+      R L + R+ L  A  +++  GL +IGV +P  M
Sbjct: 538 Y-LAKDN-RLKDASKEVR-LGLARICL--AAKNVLAEGLKLIGVSAPERM 582


>gi|302393768|sp|Q72QL1|SYR_LEPIC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 586

 Score =  246 bits (627), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 177/590 (30%), Positives = 292/590 (49%), Gaps = 62/590 (10%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81
           +VEK+   +I IE  RD   G  ST+ A+  S+ L  +P+ +++ +V  ++   D+ + V
Sbjct: 28  EVEKEAF-KIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVEILQKRTDLFEKV 86

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                GF+N  +S S+L   + + V+SG  + +  +    K+N+EFVSANPTGP+++   
Sbjct: 87  DFTPPGFVNFRISTSFLLNYIETSVLSGNYFPK--VDLPLKINLEFVSANPTGPLNIVSA 144

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD- 195
           R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R      ++      +D 
Sbjct: 145 RAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELKGEEGTQQETTDD 204

Query: 196 -----------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKD----YSV 238
                      LP   Y G Y+K +   L    K +  + N  ++K    + +    +++
Sbjct: 205 TPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKYKELAELCAVWTI 264

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R DL A  ++ D + SE   H  D   +  ++ +L + G +++          
Sbjct: 265 ENNLIWQRKDLDAFGVEFDCYFSERTLHEADK--VLSVMKDLEKSGKIFQ---------- 312

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +  + +FRST  GDD DR +++ DG  TY  AD+AY K K ERG+D +  + G 
Sbjct: 313 ------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDKIYDIWGP 366

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---D 415
           DH GY+ RL     ++  KK    V++ + V L   G  +KMSKRAG F T+  ++    
Sbjct: 367 DHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLG 426

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           + G D  R+  + R     LDFD    K++S +NPVFY+QYA+AR  SIF++  D     
Sbjct: 427 KHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICSIFKEVGDQTSKE 486

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              +          E      +L+  +A +P  I ++  A EP+++  YL   A  F   
Sbjct: 487 AAAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTNYLQSFAKAFTSF 537

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   ++N RL+      R L + R+ L  A  +++  GL +IGV +P  M
Sbjct: 538 Y-LAKDN-RLKDASKEVR-LGLARICL--AAKNVLAEGLKLIGVSAPERM 582


>gi|45657950|ref|YP_002036.1| arginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45601191|gb|AAS70673.1| arginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 596

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 177/590 (30%), Positives = 292/590 (49%), Gaps = 62/590 (10%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81
           +VEK+   +I IE  RD   G  ST+ A+  S+ L  +P+ +++ +V  ++   D+ + V
Sbjct: 38  EVEKEAF-KIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVEILQKRTDLFEKV 96

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                GF+N  +S S+L   + + V+SG  + +  +    K+N+EFVSANPTGP+++   
Sbjct: 97  DFTPPGFVNFRISTSFLLNYIETSVLSGNYFPK--VDLPLKINLEFVSANPTGPLNIVSA 154

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD- 195
           R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R      ++      +D 
Sbjct: 155 RAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELKGEEGTQQETTDD 214

Query: 196 -----------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKD----YSV 238
                      LP   Y G Y+K +   L    K +  + N  ++K    + +    +++
Sbjct: 215 TPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKYKELAELCAVWTI 274

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R DL A  ++ D + SE   H  D   +  ++ +L + G +++          
Sbjct: 275 ENNLIWQRKDLDAFGVEFDCYFSERTLHEADK--VLSVMKDLEKSGKIFQ---------- 322

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +  + +FRST  GDD DR +++ DG  TY  AD+AY K K ERG+D +  + G 
Sbjct: 323 ------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDKIYDIWGP 376

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---D 415
           DH GY+ RL     ++  KK    V++ + V L   G  +KMSKRAG F T+  ++    
Sbjct: 377 DHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLG 436

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           + G D  R+  + R     LDFD    K++S +NPVFY+QYA+AR  SIF++  D     
Sbjct: 437 KHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICSIFKEVGDQTSKE 496

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              +          E      +L+  +A +P  I ++  A EP+++  YL   A  F   
Sbjct: 497 AAAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTNYLQSFAKAFTSF 547

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   ++N RL+      R L + R+ L  A  +++  GL +IGV +P  M
Sbjct: 548 Y-LAKDN-RLKDASKEVR-LGLARICL--AAKNVLAEGLKLIGVSAPERM 592


>gi|330723522|gb|AEC45892.1| arginyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 533

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 193/588 (32%), Positives = 301/588 (51%), Gaps = 75/588 (12%)

Query: 17  EIDCKIK-VEKKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +ID +IK V +KI++       V+  P   +H   STN AM+++    LD +  A  +V 
Sbjct: 2   QIDEQIKQVLQKIINNFGYEANVVLTPSK-SHADYSTNLAMVVASKYKLDVIDFATKVVE 60

Query: 71  RIKIDPDVDSVF-----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV-N 124
           +I    D D +F     +   GFIN ++S +    I+++I++ G  +  NL  K  KV N
Sbjct: 61  QI----DKDKLFLTKIEVVKPGFINFFVSNTSYANIVNNIILEGENFA-NL--KQNKVYN 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTG +H+GH R A +G TLA+++  +G +V REYYIND G QI+ LA S+F R
Sbjct: 114 VEFVSANPTGYLHLGHVRSAAIGATLANVLEHAGNKVIREYYINDNGVQIDNLAKSLFAR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           YQQ ++N +  +PE  Y G  +    + V   + DKY  + L    E  L   K+   + 
Sbjct: 174 YQQ-IFNPNFAMPEDGYFGQDIIWAAQQVFDLVKDKYQQKSL--ENEGVLSFFKETGTKI 230

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ I+ DL  + I  D+F SE   ++         IDNL                K T 
Sbjct: 231 FLEEIKKDLAQIGIHFDVFSSEKKLYQDKK------IDNLL------------SSLKHTY 272

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359
           K D     L   +T  GDD DR L+K DG+YTYF  D+ Y   K +    D +I V G+D
Sbjct: 273 KKD---DALWLETTKFGDDKDRVLIKQDGTYTYFTPDITYHLQKLQSNNPDKLINVWGAD 329

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV+R+++ A ++     +++ L+ +LV+L ++   +KMSKR G   TL+ +++    
Sbjct: 330 HIGYVQRMKS-ALSILGYPNKVDFLIYQLVKLIKNNQELKMSKRRGTSFTLKDLLELCSK 388

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++R+ M+ R  +  LDFD  +  + S +NPV+ +QY+YAR   +  +++          
Sbjct: 389 DAIRYFMINRSENTNLDFDLDQANQISDQNPVYIIQYSYARIAQLLLKSE---------- 438

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    S F+ +E++LI  L E+  +I   T   +   L  YL +LA  F+  +S+ 
Sbjct: 439 --IKEYQATSFFEENEIKLINILKEFNEIIATITKNYKINLLNQYLLNLAKTFNSFYSNS 496

Query: 540 R--ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   NP       N + L    L LV A   I+  GL +IGV     M
Sbjct: 497 KIIGNP-------NEKNL----LALVKATGIILKIGLKLIGVSIKERM 533


>gi|294660188|ref|NP_852794.2| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286868|sp|Q7NC67|SYR_MYCGA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|284811838|gb|AAP56362.2| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930254|gb|ADC30193.1| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 549

 Score =  243 bits (620), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 296/590 (50%), Gaps = 49/590 (8%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    +++ + LK+++    VE       +I++ ++   G  S+N AM+LS+    +P 
Sbjct: 2   VFKKIKTQIDHALKQLNLPTDVE------YLIQQTKNIQFGDFSSNVAMVLSKRQNKNPQ 55

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I+ ++  + + + +  +  GFIN +LS      +L  +  +     +    +   
Sbjct: 56  EIAKQIIEQLNPN-EFEKITFSKPGFINFFLSNQDKLVVLKRLQETNYSVEKLPKEEQES 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +NIEFVSANPTG +H+GH R A  GD L++++   G+ VT+EY+IND G Q++  ALS  
Sbjct: 115 INIEFVSANPTGFLHLGHVRNAYTGDVLSNILRAVGHNVTKEYWINDLGNQVSLFALSTI 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------KWLPIVKD 235
            RY Q L  N  +LP+  Y G     V +E+   + ++  +   E       K    +  
Sbjct: 175 IRYLQELGINKYELPDDSYHGKEPIFVAEEMIKDFGNKYQDIKIEDNKIVDSKIANELTQ 234

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y    M+  I+ DL+++ ++ D++ SE   ++ +   + ++++N  +  ++YE       
Sbjct: 235 YCTNKMLHFIKQDLESIGVKMDVWTSEKVVYQSNT--LTELLNNQLKD-HIYE------- 284

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        +  R+T  GDD DR ++K +   TY+  D+A    K++RGFD +I V
Sbjct: 285 ---------QDGAVWLRTTDGGDDKDRVIIKENKQPTYYGTDIANHYLKHKRGFDRLINV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++ R    A     KK +  V+L E+V+L +D   IK SKR G+ I++  +++
Sbjct: 336 WGADHFGHILRTAYAAELTGIKKGKFVVVLIEMVKLLKDNKEIKFSKRLGNAISIPDMLE 395

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +  D+ R+ ML +  +  +  D     ++   NPV+YVQYA+AR   +  +A+ I    
Sbjct: 396 FLSKDASRWFMLNQSWTSGIRIDVDLTNKKDSSNPVYYVQYAHARIHKLLTKAEHI---- 451

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             DL   N+    S+ + +   ++ +LA +   + N     E  KL  ++Y L   FH  
Sbjct: 452 --DLNKVNLSLLNSDVERT---MVNYLASFEHYVHNVATTYEVNKLLNFVYTLTQSFHS- 505

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W +  E      +     ++   RL L  A+ ++IN  L++ G+E+  +M
Sbjct: 506 WYNSHE------ILNQKDEIKQTRLLLAKAIKNLINYLLSLFGIEAVEQM 549


>gi|206895636|ref|YP_002246999.1| arginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738253|gb|ACI17331.1| arginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 526

 Score =  243 bits (619), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 263/517 (50%), Gaps = 51/517 (9%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           D   G  +     +L++ L   P  IA+ I   ++     ++V    KG++N+ +   + 
Sbjct: 34  DITMGDYAVPIGFVLAKKLRTAPEKIAQTIAENLQGPFRAEAV----KGYVNVTMDDDWW 89

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              LS   +S  +Y         KV +E+VSANPTGP+H+GH R AVVG  LA+L+    
Sbjct: 90  LDRLSQGFISYPQYS-------GKVLVEYVSANPTGPIHIGHGRGAVVGSVLANLLDRVY 142

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                E+Y+NDAG QI     SV  R ++ L   D +LPE  Y G Y+  + K + D+Y+
Sbjct: 143 DFADSEFYVNDAGEQIRKFCKSVEIRIRE-LKGEDVELPEDAYHGDYVVDIAKSILDRYN 201

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            + L+  +E+W  +  D +V  M K  ++ L+ L +   ++ SE    R +  P R +I 
Sbjct: 202 WDALS-EDEQWNVLWND-AVDMMRKWHKETLEKLGVTMKVWTSER-LIRQEGWPER-VIQ 257

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L  +GY YE                    L F+ST+ GDD DR L+KS+G YTY+  D+
Sbjct: 258 LLQDKGYAYE----------------QDGALWFKSTIFGDDKDRVLVKSNGEYTYYLVDI 301

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K  RG++ +I V G+DH G+V R+ A   A+      + V+L + VR +R G+ +
Sbjct: 302 AYHMEKIHRGYNVLINVWGADHIGHVPRMNAALTALGFPDC-LTVVLVQTVRFWRQGVAV 360

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            MSKR G+F+TL  ++DE+G D+ R M + R     +DFD    K+++ +NPV+Y+QYAY
Sbjct: 361 AMSKRKGEFLTLDELIDEIGKDAARIMFITRSVDATIDFDIEVAKQKAMDNPVYYIQYAY 420

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R ++I  + ++         F  +V      FD  E  L+  L  +   +  A    +P
Sbjct: 421 VRAKNILTRTEE-------RQFGSSV-----GFDPHERTLLRLLNAFQERMVLAVRKLDP 468

Query: 519 YKLAFYLYDLASVFHGHWSHGR------ENPRLRFVQ 549
           + +  Y ++L+  FH  +   R      EN R + V+
Sbjct: 469 FVIESYAWELSDAFHKFYQFDRVIGSEYENARWKLVE 505


>gi|27262256|gb|AAN87409.1| Arginyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 392

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 209/373 (56%), Gaps = 19/373 (5%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + +E PR+  HG  +TN AM +++   ++P  +AE IVA I     +  V IAG GF
Sbjct: 33  LPTVALEVPREKQHGDFATNVAMTMAKQARMNPRQLAEKIVAHIDRGDWLKDVQIAGPGF 92

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN  L   +L  +L ++  +   YG +  G G +V +EFVSANPTG +H+G+ R A +GD
Sbjct: 93  INFTLHHHWLYPVLPAVQQTDDRYGASQAGAGKRVQVEFVSANPTGLLHMGNARGAALGD 152

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TLA+L+  +G++VT+E+YINDAG QI   A S+  RY Q L   D   PE  Y G  +  
Sbjct: 153 TLANLLRLAGFDVTKEFYINDAGNQIENFAKSLEARYLQ-LLGQDVPFPEEGYHGEDVAE 211

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
             + L  K   + +         ++  Y++Q  +  IR+ L    + +DI+ SE   H  
Sbjct: 212 TMRGLIAKDGDKYVPMETTLRRELLVKYALQEKLSGIRESLARFGVDYDIWFSEQSLH-- 269

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D   IR+ ++ L   GY+YE                +   L F++T +G++ D  L++S+
Sbjct: 270 DSGAIRETLETLRANGYIYE----------------NEGALWFKATSLGEEKDEVLVRSN 313

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TYFAAD+AY K K++RGFD +I + G+DH G+V R++    AV      ++V+L +L
Sbjct: 314 GIPTYFAADIAYHKNKFDRGFDWVINIWGADHHGHVSRIKNAVKAVGYNSENLDVILMQL 373

Query: 389 VRLYRDGMPIKMS 401
           VRL++ G  ++MS
Sbjct: 374 VRLFKGGEIVRMS 386


>gi|304372891|ref|YP_003856100.1| Arginyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309082|gb|ADM21562.1| Arginyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
          Length = 533

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 191/588 (32%), Positives = 300/588 (51%), Gaps = 75/588 (12%)

Query: 17  EIDCKIK-VEKKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +ID +IK V +KI++       V+  P   +H   STN AM+++    LD +  A  +V 
Sbjct: 2   QIDEQIKQVLQKIINNFGYEANVVLTPSK-SHADYSTNLAMVVASKYKLDVIDFATKVVE 60

Query: 71  RIKIDPDVDSVF-----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV-N 124
           +I    D D +F     +   GFIN ++S +    I+++I++ G  +  NL  K  KV N
Sbjct: 61  QI----DKDKLFLTKIEVVKPGFINFFVSNTSYANIVNNIILEGENFA-NL--KQNKVYN 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTG +H+GH R A +G TLA+++  +G +V REYYIND G QI+ LA S+F R
Sbjct: 114 VEFVSANPTGYLHLGHVRSAAIGATLANVLEHAGNKVIREYYINDNGVQIDNLAKSLFAR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           YQQ ++N +  +PE  Y G  +    + V   + DKY  + L    E  L   K+   + 
Sbjct: 174 YQQ-IFNPNFAMPEDGYFGQDIIWAAQQVFDLVKDKYQQKSL--ENEGVLSFFKETGTKI 230

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ I+ DL  + I  D+F SE   ++         IDNL                K T 
Sbjct: 231 FLEEIKKDLAQIGIHFDVFSSEKKLYQDKK------IDNLL------------SSLKHTY 272

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359
           K D     L   +T  GDD DR L+K DG+YTYF  D+ Y   K +    D +I V G+D
Sbjct: 273 KKD---DALWLETTKFGDDKDRVLIKQDGTYTYFTPDITYHLQKLQSNNPDKLINVWGAD 329

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV+R+++ A ++     +++ L+ +LV+L ++   +KMSKR G    L+ +++    
Sbjct: 330 HIGYVERMKS-ALSILGYPNKVDFLIYQLVKLIKNNQELKMSKRRGTSFALKDLLELCSK 388

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++R+ M+ R  +  LDFD  +  + S +NPV+ +QY+YAR   +  +++          
Sbjct: 389 DAIRYFMINRSENTNLDFDLDQANQISDQNPVYIIQYSYARITQLLLKSE---------- 438

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    S F+ +E++LI  L E+  +I   T   +   L  YL +LA  F+  +S+ 
Sbjct: 439 --IKEYQATSFFEENEIKLINILKEFNEIIATITKNYKINLLNQYLLNLAKTFNSFYSNS 496

Query: 540 R--ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   NP       N + L    L LV A   ++  GL +IGV     M
Sbjct: 497 KIIGNP-------NEKNL----LALVKATGIVLKIGLKLIGVSIKERM 533


>gi|284931022|gb|ADC30960.1| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 549

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/590 (27%), Positives = 294/590 (49%), Gaps = 49/590 (8%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    +++ + LK+++    +E       +I++ ++   G  S+N AM+LS+    +P 
Sbjct: 2   VFKKIKTQIDHALKQLNLPTDIE------YLIQQTKNIQFGDFSSNVAMVLSKRQNKNPE 55

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I+ ++  + + + +  +  GFIN +LS      +L  +  +     +    +   
Sbjct: 56  EIAKQIIEQLNPN-EFEKITFSKPGFINFFLSNQDKLVVLKRLQKTNYSVEKLPKEEQES 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +NIEFVSANPTG +H+GH R +  GD L +++   G+ VT+EY+IND G Q++  ALS  
Sbjct: 115 INIEFVSANPTGFLHLGHVRNSYTGDVLGNILRAVGHNVTKEYWINDLGNQVSLFALSTI 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------KWLPIVKD 235
            RY Q L  N   LP+  Y G     V +E+   + ++  +   E       K    +  
Sbjct: 175 IRYLQKLGINKYQLPDDSYHGKEPIFVAEEMIKDFGNKYQDIKIEDNKIVDSKIANELTQ 234

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y    M+  I+ DL+++ ++ D++ SE   ++ +   + ++++N  +  ++YE       
Sbjct: 235 YCTNKMLHFIKQDLESIGVKMDVWTSEKVVYQSNT--LTELLNNQLKD-HIYE------- 284

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        +  R+T  GDD DR ++K +   TY+  D+A    K++RGFD +I V
Sbjct: 285 ---------QDGAVWLRTTDGGDDKDRVIIKENKQPTYYGTDIANHYLKHKRGFDRLINV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++ R    A     KK +  V+L E+V+L +D   IK SKR G+ I++  +++
Sbjct: 336 WGADHFGHILRTAYAAELTGIKKGKFVVVLIEMVKLLKDNKEIKFSKRLGNAISIPDMLE 395

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +  D+ R+ ML +  +  +  D     ++   NPV+YVQYA+AR   +  +A+ I    
Sbjct: 396 FLSKDASRWFMLNQSWTSGIKIDVDLTNKKDSSNPVYYVQYAHARIHKLLTKAEHI---- 451

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             DL   N+    S+ + +   ++ +LA +   + N     E  KL  ++Y L   FH  
Sbjct: 452 --DLTKVNLSLLNSDVERT---MVNYLASFEHYVHNVATTYEVNKLLNFVYTLTQSFHS- 505

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W +  E      +     ++   RL L  A+ ++IN  L++ G+E+  +M
Sbjct: 506 WYNSHE------ILNQKDEIKQTRLLLAKAIKNLINYLLSLFGIEAVEQM 549


>gi|183221471|ref|YP_001839467.1| arginyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911558|ref|YP_001963113.1| arginyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226701381|sp|B0SB29|SYR_LEPBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701382|sp|B0SSV1|SYR_LEPBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167776234|gb|ABZ94535.1| Arginine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779893|gb|ABZ98191.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase; ArgRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 594

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 178/583 (30%), Positives = 286/583 (49%), Gaps = 58/583 (9%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I IE  RD   G  S+  A+     L L+P  IAE +++ IK +   + V  +  GFIN
Sbjct: 36  KIRIEYSRDEKFGDYSSPFALENKNILKLNPKEIAEGVLSEIKNETLFEFVTFSPPGFIN 95

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +   +L +  + ++   + + +    +   + +EFVSANPTGPM++   R A  GD L
Sbjct: 96  FRIRSQFLIQYTNQVMSPMVTFAKT--DEKQSILLEFVSANPTGPMNIVSARSAAYGDAL 153

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD---------- 195
           A+L+   G+ V RE+Y+ND G Q+  L ++V  R      ++  +  D            
Sbjct: 154 ANLLLSLGHTVKREFYVNDYGNQVYLLGVAVLLRIFEEKGEKISFQEDESKESVFTLIEK 213

Query: 196 --LPEGYYPGVYLKHVGKE-LADKYSS-ELLNFPEEK-WLPIVKD---YSVQAMMKIIRD 247
             LP+  Y G Y++ + KE L++K  S ++  + + K W   + D   Y+V+  +   ++
Sbjct: 214 RILPKESYRGEYIRDIAKEVLSNKTKSIQVEEWIQNKNWDECIHDLSKYAVEYNLSRQKE 273

Query: 248 DLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           DLK   +  D F SE   H  GD       ++N+            P   K      +D 
Sbjct: 274 DLKLFGVHFDQFFSERSLHEAGD-------VENV------------PTLLKKEDVSTIDG 314

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
           K L F ST  GDD DR + + DG  TY  AD+AY   KY+RGF  +I + G DH GY+ R
Sbjct: 315 K-LHFLSTQYGDDKDRVIRREDGRPTYLMADIAYHFDKYKRGFTKLIDIWGPDHYGYIAR 373

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---GSDSVR 423
           L+    +  +      +L+ + V L  +   +KMSKR G F T+R ++  +   G D  R
Sbjct: 374 LKGAVLSFGKSNDSFLILIAQQVNLIENKEKVKMSKRLGIFQTMRDLLSYLGKNGKDVGR 433

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L R +   LDFD    K++S +NPVFY+QYA+AR  SIFR+ +    D      P+ 
Sbjct: 434 YFFLMRSSDAPLDFDLDLAKDESDKNPVFYIQYAHARICSIFRELQISIADWS---IPK- 489

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V+  +       L+L+  +A +   + +     EP++L  YL  L+  F   +SH  ++ 
Sbjct: 490 VVSGDCFQSEERLRLLFWVARFQEEVYDTATNLEPHRLTNYLQSLSKAFTKFYSH--KDN 547

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           R++  Q   R+  +    L+      I SGL ++G+ SP +MS
Sbjct: 548 RIKEKQGEEREQLLF---LILFTKRAIASGLELLGISSPEKMS 587


>gi|196017893|ref|XP_002118673.1| hypothetical protein TRIADDRAFT_62694 [Trichoplax adhaerens]
 gi|190578490|gb|EDV18839.1| hypothetical protein TRIADDRAFT_62694 [Trichoplax adhaerens]
          Length = 344

 Score =  237 bits (604), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/323 (38%), Positives = 198/323 (61%), Gaps = 4/323 (1%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + I +E P++  +G LS+N ++I+++   L+P  +A+ + + +  +  +  + I G GF+
Sbjct: 26  NEIKVEYPKNEDYGDLSSNVSIIIAKKKKLNPRDVAKELSSILLANEYISEISIEGAGFL 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  + P +  K L  +V  G  Y +  IG G K+N+EFVSANPTGP+H+GH + AV GD 
Sbjct: 86  NFKIKPYFWHKFLKKLVNLGHNYPKIDIGNGEKINVEFVSANPTGPLHLGHAKGAVFGDV 145

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +++L++  GY V RE+YINDAG QI TL  S+  RY+Q L     +L +  YPG YL  +
Sbjct: 146 ISNLLSKCGYNVIREFYINDAGNQIKTLTKSLEIRYKQLL-GEKIELDKDCYPGEYLIDI 204

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              L D++ ++L           +K+++V+ ++KII+DDL  L + HD FISE      +
Sbjct: 205 ATILKDEFKNKLDTLTNNDREEFLKNFAVERILKIIKDDLSKLGVIHDYFISEKKLI--E 262

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            + +   I  L  +  +Y+GIL  PKS+     +  ++Q+LF+ST  GDD+DR ++KS+G
Sbjct: 263 QNKVESCIYFLKEKNLLYKGILDKPKSEENNYWE-SKEQILFKSTKFGDDIDRAVIKSNG 321

Query: 330 SYTYFAADLAYFKCKYERGFDNM 352
            YTYF +D+AY   K +RGF+NM
Sbjct: 322 EYTYFVSDIAYHLDKIKRGFNNM 344


>gi|301062427|ref|ZP_07203082.1| arginine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443468|gb|EFK07578.1| arginine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 399

 Score =  233 bits (595), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/428 (34%), Positives = 239/428 (55%), Gaps = 32/428 (7%)

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           + RE+Y+NDAG QI  L  S++ R +Q   N +   PE  Y G Y+  +   +A +    
Sbjct: 1   MVREFYVNDAGLQIRMLGESIWARMKQK-ENPNFVFPENGYHGDYILDLADTIAKEIDLS 59

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             N P+E      +D   + M+  I+  L    I  D++ SE+D H      +   +D++
Sbjct: 60  SKN-PDEAVALCAQD-GKEMMLTEIQRALDRFRINFDVWSSEEDLHA--SGLLDQTLDSI 115

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRPLLKSDGSYTYFAADLA 339
             +G++Y                 DR+  ++ +++  GDD DR + KSDG YTYFA+D+A
Sbjct: 116 QAKGHLY-----------------DREGAVWIKTSQFGDDKDRVIRKSDGQYTYFASDIA 158

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y   K+ RGF   I + G+DH GYV R++A   +    +  ++VLL +LV+L+ +G  ++
Sbjct: 159 YHLEKHRRGFTKAINIWGADHHGYVPRVKAALLSHGIPENWLSVLLIQLVKLWENGQELR 218

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSKRAG F+TL+ ++DEVG D+ RF+ L + +   LD D   +K+Q  +NPV+YVQYA+A
Sbjct: 219 MSKRAGSFVTLQELLDEVGVDAARFVFLTKSHDSPLDVDMDLIKKQDSDNPVYYVQYAHA 278

Query: 460 RCRSIFRQ-AKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           R  SI R+ A +    LD  D     +  +E      E+ +I  ++E+P ++E+ +   E
Sbjct: 279 RICSIIRKAASEGIAVLDHIDGISEKLALKE------EMAIIRTMSEFPALLEDISKTLE 332

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++L +YL  LA+ FH +++ G +N  LR V   ++ LT  RL LV  V  +I +GL ++
Sbjct: 333 AHRLTYYLTHLAASFHRYFNMGLKNSELRVV-TEDKTLTQARLILVSGVKIVIANGLRLL 391

Query: 578 GVESPNEM 585
           GV +P +M
Sbjct: 392 GVSAPEKM 399


>gi|71894371|ref|YP_278479.1| arginyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851159|gb|AAZ43768.1| arginyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 551

 Score =  233 bits (594), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 252/498 (50%), Gaps = 36/498 (7%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS 103
           H STN A  L++ L  +P+ +A+ I + +  +   + V     GFINL +   Y    + 
Sbjct: 53  HYSTNIAFTLAKSLKTNPIELAKNIQSELLQEDLYERVDFIAPGFINLVVKDIYFNNAIY 112

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
            I+     +G+       K+NIE+VSANPTG +HVGH R AVVG  + +++ F+GY V  
Sbjct: 113 EIIKLKNNFGK-FKANNQKINIEYVSANPTGFLHVGHVRGAVVGKVIYNVLKFAGYSVEG 171

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           EYY+N+AG QIN LA SV + Y + L+   S   E  Y G  +    K++   + ++ + 
Sbjct: 172 EYYVNNAGNQINLLARSVLYWYLK-LHKISSPKVEDGYNGKDILLCAKKIKKVFGNKFIK 230

Query: 224 FPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
             E  K     K +S + + + I  DL  L I  D    E   +        DI      
Sbjct: 231 LKESHKLFADFKKFSYEILFEEILKDLWKLKINFDSVFYESSLYENS-----DI------ 279

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                E +L   K+KT Q    D   L+ +++  GDD DR L+KSD S+TYF  D+AY  
Sbjct: 280 -----EKVLEKLKNKTYQ----DGNSLVLKTSEYGDDKDRVLVKSDKSFTYFLPDIAYHY 330

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K+++  D +I + G+DH GY++R++A    ++   + +++L  +LVRL ++G   KMSK
Sbjct: 331 LKFKKA-DKLINIWGADHLGYIQRIKAAMHFLNLNDSNLDILTLQLVRLIKNGQEFKMSK 389

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R G  +TL+ ++     DS+ F ML R ++   DFD  K       NPV+ V+Y+Y+R  
Sbjct: 390 RKGTSVTLKDLLKVSNKDSIFFGMLLRDSNSKYDFDIDKNNASDINNPVYIVKYSYSRAY 449

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+ +               ++   +E+       +L++ L  +  +I   T   +P  L 
Sbjct: 450 SLSQN------------LAKHQKTKEAFLSDKAKKLVLELDFFQELISVITKTLKPNLLT 497

Query: 523 FYLYDLASVFHGHWSHGR 540
            YL +LA++F+  +S  +
Sbjct: 498 QYLINLANLFNSFYSEKK 515


>gi|27379867|ref|NP_771396.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353020|dbj|BAC50021.1| bll4756 [Bradyrhizobium japonicum USDA 110]
          Length = 225

 Score =  233 bits (593), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 118/224 (52%), Positives = 155/224 (69%), Gaps = 5/224 (2%)

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A +  K  ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG D+VRFMM
Sbjct: 1   MQAAVKATTSGKGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGQDAVRFMM 60

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVI 485
           L+RKN  +LDFD  KV EQS++NPVFYVQY +AR  SIFR A+ ++FPDL  D   R   
Sbjct: 61  LYRKNDAVLDFDLAKVMEQSRDNPVFYVQYGHARGHSIFRNARAEVFPDLPDDTAKRIAW 120

Query: 486 PQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ES      D  EL L+  LA YPR++E A  A EP+++AFYLYDLAS FH  W+ GR+
Sbjct: 121 LSESAVERLSDPVELDLLKRLAIYPRMLEAAAAAHEPHRIAFYLYDLASEFHALWTKGRD 180

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LRF+  N+  LT  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 181 LPYLRFIINNDADLTKARLAMVQGVVSVLASGLAILGVHAPDEM 224


>gi|257460580|ref|ZP_05625681.1| arginyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441911|gb|EEV17053.1| arginyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 598

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 246/486 (50%), Gaps = 46/486 (9%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +S+ V   +  RN      K+ +E++SANPTGP+H+GH R AV GDT A +  + G+ V 
Sbjct: 156 NSVAVPKCDEARNSAAASQKILLEYISANPTGPLHIGHVRGAVYGDTFARIGGYLGHRVD 215

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            EYYINDAG QI  L  S+  R ++ L   D   PE YY G Y+  +      ++  E+ 
Sbjct: 216 TEYYINDAGNQIELLGTSIALRARE-LAGEDVSYPEKYYRGEYIDEIIPLAHAQFGDEI- 273

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            F +E  +  + +++   ++KII+ DL    I    + SE   + G+  P    I  L R
Sbjct: 274 -FRDESRILQLAEFAKDEVLKIIQKDLADAGIHIQNWASEKSLY-GELEPT---IRKLER 328

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G +YE                   ++  RS+ +GD+ DR +++ D   TY A D+ Y  
Sbjct: 329 SGKMYE----------------QESKIWIRSSQLGDEKDRVVIREDARPTYLAGDIVYHN 372

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K+ERG++  I + G+DH GY+ RL+A    +   ++++ ++L ++V L +DG   KMSK
Sbjct: 373 NKFERGYERCINIWGADHHGYIARLKAAVHFLGYDESRLEIILMQMVNLLKDGQTYKMSK 432

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           RAG+ I +  V+  +G D++RF+ + +K    L+FD  ++  +   NP+FY+ YA+AR  
Sbjct: 433 RAGNAILMSDVLAAIGRDAMRFIFISKKGETPLEFDVDELAREDSSNPIFYINYAHARVN 492

Query: 463 SIFRQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
            IF +A     D+   DF              D + L L         ++ +A  ++   
Sbjct: 493 QIFTKAGKREADVLGADF-----------GTLDEAGLGLAFAALGLNEILNDAFNSRGLQ 541

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           KL  +L  LA+ FH +++   EN   R V + N      +L+L   VA  I +   ++G+
Sbjct: 542 KLPDFLKALAADFHKYYN---EN---RVVGSENED---AKLKLFALVALSIRTAFALMGL 592

Query: 580 ESPNEM 585
            +  +M
Sbjct: 593 SAKEKM 598



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)

Query: 27  KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           KIL R +V+E+P+D +  H ++  A  L++ L   P  IAE + A+ K D ++ S   A 
Sbjct: 11  KILSRKVVLEKPKDKSLAHYASPEAFALAKELRKAPKLIAEELAAKFK-DSEILSA-TAV 68

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRN--LIGKGTKVNIEFVSANPTGPMHVGHCRC 143
            G++N +L P  L  +  + +  G ++ +N   +G+G     E +            C  
Sbjct: 69  NGYLNFHLKPVVLGALAENALRLGGDFAKNDAELGRGILPASERI------------CAG 116

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
             V +  A+ +A SG         NDA    N+ A   F        +N   +P+
Sbjct: 117 EPVCNGFAANLAASG---------NDAAKSQNSAARQNFISQNSEAASNSVAVPK 162


>gi|218514942|ref|ZP_03511782.1| arginyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 187

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 105/188 (55%), Positives = 147/188 (78%), Gaps = 3/188 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +A++I+A++K D DV  V +AG GFIN+ LS  Y +++L+S++ SG +YGR+ +G
Sbjct: 60  SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLG 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA
Sbjct: 120 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179

Query: 179 LSVFWRYQ 186
            SVF RY+
Sbjct: 180 RSVFLRYR 187


>gi|12045239|ref|NP_073050.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660405|ref|ZP_05405814.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351172|sp|P47618|SYR_MYCGE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3844966|gb|AAC71605.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079023|gb|ABY79641.1| arginyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 537

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 250/511 (48%), Gaps = 49/511 (9%)

Query: 80  SVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           +VFIA   FIN  +S   YL  ++ +   +          K  K+ IE VSANPTG +H+
Sbjct: 71  NVFIANNNFINFQISYQKYLEYLIKTPCFTK---------KNIKILIESVSANPTGRIHL 121

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A  GD L +L    GY    EY++ND G Q    + SV+   Q          P+
Sbjct: 122 GHVRIAFFGDVLNNLAKLLGYTTVCEYWVNDYGQQARVFSFSVYQSLQLKKNIAIQQHPD 181

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV---QAMMKIIRDDLKALNIQ 255
           GY  G+ +  +  E+ + +  + LNF E      +  + V   Q ++ +I+ DL  +++ 
Sbjct: 182 GY-SGIVIDKIASEI-ENFPVDNLNFEEFCKTSFLDHFLVNCTQKVLSLIKSDLNKIHVF 239

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D +  E +  +   +   D+++ L    Y Y+                    L  ++T+
Sbjct: 240 IDSWKFESEIVK--KTNFNDLLEQLKPNSYFYQD-----------------NALWLKTTL 280

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAV 374
            GDD DR L++SD   +YF  D+AY   K +RGFD +  V G+DH G++KR+  A  A  
Sbjct: 281 YGDDKDRVLIRSDKRASYFGTDVAYHLEKLQRGFDILFNVWGTDHEGHIKRMYCAFDALK 340

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +  K  + +   +LV LY++   +++SKRAG+ IT+  ++  +  D+ R+ ML + N  +
Sbjct: 341 NTTKTSLKIFALQLVTLYKNKELVRLSKRAGNVITIETMLSMISEDAARWFMLSQNNGTI 400

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +  D      Q+  NPV+YVQYA+AR  SI R A     D   ++   +++  E      
Sbjct: 401 IKIDLDIANLQNSANPVYYVQYAFARMNSILRIAN---SDQLKEITDCSLLINE-----K 452

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E+ L+  L  YP +++ A    E + L  +LY+ AS+FH  +   + N         N  
Sbjct: 453 EISLLNQLVYYPFMLQKAMETGELHLLTNFLYETASLFHSWYKVCKINDD------KNSL 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L+  RL L+ ++  I+   L+++ + +P +M
Sbjct: 507 LSAQRLALLRSLQFIVKQILDVLKISTPQQM 537


>gi|307610758|emb|CBX00369.1| arginine tRNA synthetase [Legionella pneumophila 130b]
          Length = 280

 Score =  207 bits (526), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/277 (38%), Positives = 174/277 (62%), Gaps = 10/277 (3%)

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L FR+T  GD+ DR L++++G  TYFA+D+AY   KY+RGFD +I + G+DH GYV R++
Sbjct: 14  LWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIK 73

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               A+   ++ ++V+L +   LYR G  ++MS R+G F+TLR + +EVG+D+ R+  + 
Sbjct: 74  TAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVA 133

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           RK  + +DFD    K +S +NPV+Y+QYA+AR  S+ RQ K+     D D+  +N+   E
Sbjct: 134 RKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERSLKWDKDMGLKNLDLLE 193

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
            + +T+ + LI   A YP VI++A  + EP++LA+YL +LA+  H +++  +       +
Sbjct: 194 QQHETTLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAIQ-------L 243

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +L   RL L+ +V  ++N+GL I+GV +P  M
Sbjct: 244 LCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 280


>gi|291533468|emb|CBL06581.1| Arginyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 271

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/278 (41%), Positives = 162/278 (58%), Gaps = 15/278 (5%)

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L  +ST  GDD DR +++ +G  TY AAD+AY   K+ER FD +I + G+DH GYV R++
Sbjct: 8   LWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHDNKFERKFDKLINIWGADHHGYVCRVK 67

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A  AA+      + VLL ++V LYRDG  +KMSKR G  +TL  +++EVG+D+ RF  + 
Sbjct: 68  AAMAALGYNADDLEVLLLQMVSLYRDGELVKMSKRTGQSVTLSELIEEVGADAARFFFIM 127

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R     LDFD    K QS ENPV+YVQYAYAR  SIFRQ K+   +   +       PQ 
Sbjct: 128 RSLDSQLDFDLNLAKSQSNENPVYYVQYAYARICSIFRQMKEAGIETTEN-------PQL 180

Query: 489 SEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           S   D +E+ LI  L  YP  I  A   + P+++A Y++DLAS+FH  ++  R       
Sbjct: 181 SLLTDEAEIALIKKLLSYPDEIATAAKNKAPHRIATYVHDLASMFHSFYNKCR------- 233

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   + KL   RL L  AV  ++   L I+GV +P +M
Sbjct: 234 ILGVDAKLAGARLALCLAVKYVLAHALAILGVNAPEKM 271


>gi|13508295|ref|NP_110245.1| arginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501047|sp|P75222|SYR_MYCPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1673957|gb|AAB95934.1| arginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 537

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 250/523 (47%), Gaps = 75/523 (14%)

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           VF+A   FIN  +SP      L +              K TKV IE+VSANPTG +H+GH
Sbjct: 72  VFVANNNFINFEISPQKYLDFLKT--------KPTFAPKPTKVLIEWVSANPTGELHLGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDL 196
            R A  G  L +LM F G++  REY++ND G Q      SV+    QAL+       +  
Sbjct: 124 VRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVY----QALHLQQNIKVTPH 179

Query: 197 PEGYYPGVYLKHVGKELA----DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           P+GY  G  +  + K +     DK S E   F ++ +L  +       ++++I+ DL  +
Sbjct: 180 PDGY-EGELVDSIAKTITGIPLDKLSFE--EFLQQPFLDQLLADCTAKVLEVIKQDLATI 236

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +I  D +  E        S +    D        Y+ +L   K +   + D     +  +
Sbjct: 237 HIHFDSWKFE--------SQVVKETD--------YKKLLTQFKDEAHYEKD---GAIWLK 277

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +T+ GDD DR L++ D   +YF  D+AY   K  RGFD +  + GSDH G++KR+  V  
Sbjct: 278 TTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYE 337

Query: 373 AVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            +   +K Q+ +   +LV LY++   +++SKRAG+ IT++ ++  +  D+ R+ ML + N
Sbjct: 338 GLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDAARWFMLSQTN 397

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           + ++  D      Q+  NPV+YVQYAYAR  S+ +                 V+ Q +  
Sbjct: 398 NSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLK-----------------VVDQAALA 440

Query: 492 DTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             ++  L+ H         L  +  ++E   ++ E + L  YLY+ A++FH  +   + N
Sbjct: 441 QVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKIN 500

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 Q N  +  ++ LQ +H V   +   L I+ + +P +M
Sbjct: 501 DP---AQYNLTQQRLLLLQSLHHVFGQL---LQILNITAPQQM 537


>gi|83942562|ref|ZP_00955023.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846655|gb|EAP84531.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 240

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/222 (44%), Positives = 147/222 (66%), Gaps = 2/222 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  S + + L  +     + + +  D I +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP + +  +AG GF+NL LS +  + ++ +++  G ++GR  +G+
Sbjct: 61  KPRDIAEKLAEKLAEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           SV+ RY +A +  +   PEG YPG YL  VG  L   +++ +
Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALKTTWATPI 221


>gi|301633574|gb|ADK87128.1| arginine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 537

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 249/523 (47%), Gaps = 75/523 (14%)

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           VF+A   FIN  +SP      L +              K TKV IE+VSANPTG +H+GH
Sbjct: 72  VFVANNNFINFEISPQKYLDFLKT--------KPTFAPKPTKVLIEWVSANPTGELHLGH 123

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDL 196
            R A  G  L +LM F G++  REY++ND G Q      SV+    QAL+       +  
Sbjct: 124 VRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVY----QALHLQQNIKVTPH 179

Query: 197 PEGYYPGVYLKHVGKELA----DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           P+GY  G  +  + K +     D  S E   F ++ +L  +       ++++I+ DL  +
Sbjct: 180 PDGY-EGELVDSIAKTITGIPLDNISFE--EFLQQPFLDQLLADCTAKVLEVIKQDLATI 236

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +I  D +  E        S +    D        Y+ +L   K +   + D     +  +
Sbjct: 237 HIHFDSWKFE--------SQVVKETD--------YKKLLTQFKDEAHYEKD---GAIWLK 277

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +T+ GDD DR L++ D   +YF  D+AY   K  RGFD +  + GSDH G++KR+  V  
Sbjct: 278 TTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYE 337

Query: 373 AVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            +   +K Q+ +   +LV LY++   +++SKRAG+ IT++ ++  +  D+ R+ ML + N
Sbjct: 338 GLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDAARWFMLSQTN 397

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           + ++  D      Q+  NPV+YVQYAYAR  S+ +                 V+ Q +  
Sbjct: 398 NSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLK-----------------VVDQAALA 440

Query: 492 DTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             ++  L+ H         L  +  ++E   ++ E + L  YLY+ A++FH  +   + N
Sbjct: 441 QVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKIN 500

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 Q N  +  ++ LQ +H V   +   L I+ + +P +M
Sbjct: 501 DP---AQYNLTQQRLLLLQSLHHVFGQL---LQILNITAPQQM 537


>gi|218752998|ref|ZP_03531794.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 352

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 196/390 (50%), Gaps = 47/390 (12%)

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+ ++ +++  K + + L+ P+ +     +   V  M   I+  L       D++  ED 
Sbjct: 1   YITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDS 59

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            H G    + + I  L   G +YE      K   T            R++  GDD DR +
Sbjct: 60  MHTG--GRVENAIARLRETGNIYE------KDGAT----------WLRTSAFGDDKDRVV 101

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL
Sbjct: 102 IKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVL 161

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R+ ++       +D D      
Sbjct: 162 IGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSS 221

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--- 501
            S ENPV+YVQYA+AR  ++ R A ++            +IP     DT+ L+L+ H   
Sbjct: 222 ASNENPVYYVQYAHARLSALARNAAEL-----------ALIP-----DTNHLELLNHDKE 265

Query: 502 ------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
                 L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P+          L
Sbjct: 266 GTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEQPTDL 322

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L  A   +I +GL IIGV +P  M
Sbjct: 323 HTARLALCQATRQVIANGLAIIGVTAPERM 352


>gi|289761447|ref|ZP_06520825.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|289708953|gb|EFD72969.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 344

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 188/377 (49%), Gaps = 46/377 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           + + L+ P+ +     +   V  M   I+  L       D++  ED  H G    + + I
Sbjct: 5   APDALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAI 62

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L   G +YE      K   T            R++  GDD DR ++KSDG   Y A D
Sbjct: 63  ARLRETGNIYE------KDGAT----------WLRTSAFGDDKDRVVIKSDGKPAYIAGD 106

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           LAY+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V L RDG P
Sbjct: 107 LAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQP 166

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG  +TL  +V+ +G D+ R+ ++       +D D       S ENPV+YVQYA
Sbjct: 167 VRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYA 226

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRV 508
           +AR  ++ R A ++            +IP     DT+ L+L+ H         L E+PRV
Sbjct: 227 HARLSALARNAAEL-----------ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRV 270

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E A   +EP+++  YL DLA  +H  +   R  P+          L   RL L  A   
Sbjct: 271 LETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQ 327

Query: 569 IINSGLNIIGVESPNEM 585
           +I +GL IIGV +P  M
Sbjct: 328 VIANGLAIIGVTAPERM 344


>gi|295400647|ref|ZP_06810624.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977228|gb|EFG52829.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 302

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 178/329 (54%), Gaps = 30/329 (9%)

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ SE   ++     I + +  L  +G++YE      K   T           FRST  
Sbjct: 4   DVWYSETSLYKS--GKIDEALAVLRERGHIYE------KDGAT----------WFRSTTF 45

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G+DH GY+ R++A  AA+  
Sbjct: 46  GDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWGADHHGYIPRMKAAIAALGY 105

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
               + V + +LV LY++G  +KMSKR G  +T+R +++EVG D+ R+    R +   LD
Sbjct: 106 DPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVGLDATRYFFAMRSSDTHLD 165

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QS ENPV+YVQYA+AR  SI RQ +++    + DL   + I  E      E+
Sbjct: 166 FDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGDL-QLDYIQTE-----KEI 219

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  L E+P  +  A + + P+++  Y+++LAS  H  ++        + +   N + +
Sbjct: 220 ELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYNAE------KVLDPENAEKS 273

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L+ AV   + + L +IGV +P +M
Sbjct: 274 RARLALMKAVQITLQNALALIGVSAPEKM 302


>gi|321309631|ref|YP_004191960.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801475|emb|CBY92121.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 557

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 262/561 (46%), Gaps = 58/561 (10%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
            +D   G + TN A  +S     +P  + E ++ ++     V S  +   GFIN++ SP 
Sbjct: 33  TKDYKFGDIFTNFACRISSKYKKNPKDVGEELLKQVGELKYVSSAKVEKNGFINIFFSPE 92

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              +  S I+       R  I +   +N    +E VSANPTG +H+GH R  +  DTLA+
Sbjct: 93  IFSEYYSEILEK-----REDIWRKHPINSWYFVEIVSANPTGLLHIGHARNGIFSDTLAN 147

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+ + GY V REY +N+ G QI  L  S++ +Y+  L    + +P      V +K+ GKE
Sbjct: 148 LLEYGGYFVHREYLVNNLGNQIKELLESIWIKYKAKL----TSIPRESNTKV-VKYNGKE 202

Query: 213 LADKYSSELLNFPEEKWL-----------PIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           + D+    L++   ++W+           P ++   V   +  I  DL   NI+ + +  
Sbjct: 203 I-DECVDYLISTHGQRWIFDRNIFESKSYPELEKLVVSYFLNEIEKDLARYNIEVNAWKF 261

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F   +   I D+  ++     V +G +     +    C                  D
Sbjct: 262 ESSF--VNDESINDLFKSMKEYLRVKDGAIWFKAGEILDGCK-----------------D 302

Query: 322 RPLLKSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             L+K+DG +TY+  DL Y  +K         +I ++GSDH G++ +L+A          
Sbjct: 303 EVLIKNDGKHTYYCQDLIYHLYKLSLLGNEGKIINILGSDHYGHIDKLKAFLKLKEVDDD 362

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           +++ +  +LV+L      +K+SKR    I LR +++ +  +  R+ ++ +     L+ D 
Sbjct: 363 RVHFICMQLVKLMEHSTLVKISKRDSKVIYLRDLMNYMTYEEARWFLVSQHPDSPLEIDI 422

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++K+++  NP FYV YAY+R   I R+  +  P    D + +  +  ++  D  E  ++
Sbjct: 423 QRLKQKNYNNPAFYVMYAYSRIFQILRKHGE--P----DFYSKKEVLFKTITDGIEKTIM 476

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L ++  VI  A    +PY++  YL+ LA  FH  +    E  +L   + +  +    R
Sbjct: 477 NTLMQWDEVIHEAIETLQPYRITQYLFKLAKEFHSFY----EETKL-LQEGHEEEWLRDR 531

Query: 560 LQLVHAVASIINSGLNIIGVE 580
           L L++A    I+SGL+I+ ++
Sbjct: 532 LALLNAAKYTIHSGLSILKIK 552


>gi|294666099|ref|ZP_06731357.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604113|gb|EFF47506.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 354

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 184/358 (51%), Gaps = 30/358 (8%)

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  ++ ++V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE 
Sbjct: 25  LEAIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE- 81

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                          +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG+
Sbjct: 82  ---------------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGY 126

Query: 350 DNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +  I  +G+DH G + R+ A   A  +   +     +L ++V + R G  +K+SKRAG +
Sbjct: 127 ERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSY 186

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +TLR +++E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQ
Sbjct: 187 VTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQ 246

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A++     D       +       D   L +++ L+ YP V+E A  A EPY++A YL +
Sbjct: 247 AQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRE 303

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  FH  W H   N ++    A  R     +L L  A   ++ +GL ++GV +P +M
Sbjct: 304 LAHAFHT-WYH---NSKVLVDAAAERD---AKLTLAVATQQVLANGLELLGVSAPEKM 354


>gi|253315750|ref|ZP_04838963.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 343

 Score =  183 bits (464), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 194/379 (51%), Gaps = 40/379 (10%)

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  + 
Sbjct: 1   KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 57

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I +++  +   GY YE                       R+T   DD DR L+K+DG+
Sbjct: 58  GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 101

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VR
Sbjct: 102 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 161

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NP
Sbjct: 162 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 221

Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           V+Y QYA+AR  SI +QAK    ++    DF       I  E       ++L+  +A++ 
Sbjct: 222 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 271

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             IE+A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV
Sbjct: 272 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 324

Query: 567 ASIINSGLNIIGVESPNEM 585
              + + L ++GV +P  M
Sbjct: 325 RITLKNALAMVGVSAPESM 343


>gi|20094195|ref|NP_614042.1| arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|23822192|sp|Q8TXB6|SYR_METKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19887217|gb|AAM01972.1| Arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 592

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 164/591 (27%), Positives = 261/591 (44%), Gaps = 99/591 (16%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPS-YLRKI 101
           L+T  A+ L++ L  +P  +AE IV    +D  V  +  ++ G GFINL L  S Y    
Sbjct: 51  LATPVALSLAKELDENPRELAETIVEESDLDDVVFVEKAWVEGPGFINLKLDRSQYAALT 110

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L SI   G EYG   +G G  V +E  SANP GP+H+GH R AV+GD LA  M F+ Y V
Sbjct: 111 LRSIFYYGEEYGSLDLGMGRPVILEHTSANPNGPLHIGHGRNAVIGDILARCMVFTNYGV 170

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY---- 217
             +YY+ND G QI  LA    W+Y   +     ++PEG  P  +   +  E A +     
Sbjct: 171 EVQYYVNDMGKQIAMLA----WKY---IKEGRPEVPEGEKPDEFFGKLYTEAAREIEEDP 223

Query: 218 -----------SSELLNFPEEKWLPIVKDYSVQAMMKIIR---DDLKALNIQHDIFISED 263
                      S E     EE     + D     + + +R     L+ L + HD F+ E 
Sbjct: 224 ELEEVVERFLRSYERYLVEEESRAERIADAFQTVVEECLRGHIQTLERLRVAHDRFVYES 283

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +F R       +I++ L   G   E      +       D++           G D +  
Sbjct: 284 EFARD----ALEIVEKLLDMGVAEE------REDGAVVVDLED---------YGIDKELV 324

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L +SDG+  Y   D+AY   K  R    ++ V+G+DH   V++L AV   + E   +I+V
Sbjct: 325 LTRSDGTTLYTTRDIAYHLWKLGRA-TFVVDVLGADHKLAVEQLRAVLDMLEENPDRIDV 383

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITL-----------------------------RHVV 414
           +  E + L        MS R G ++TL                               + 
Sbjct: 384 VFYEFIHLPEGS----MSTRKGRYVTLDEFLEEAKKRALEKMKAAGVAEELSDEEREKIA 439

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E+   +VRF +     ++ ++FD+ +  +  +  P  ++QYAYAR +SI R+A     D
Sbjct: 440 EEIAIGAVRFAIARVSPNKPIEFDWDEALDFRRGGP--FIQYAYARAKSILRKA-----D 492

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            + + F    +  +  F     +LI+ ++++PR +      + P  LA Y YDLA  FH 
Sbjct: 493 EEVNRFDAAYLNDDHSF-----ELILKMSKFPRHVAQCVRKRRPDILAEYAYDLAKTFHT 547

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +    E P L      + ++   RL+LV A   +  + +N++G+ +   M
Sbjct: 548 FYE---EVPVL---HVEDDEVREARLKLVEAFTIVAENLMNLLGIPTLERM 592


>gi|58699629|ref|ZP_00374318.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533852|gb|EAL58162.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 194

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/204 (46%), Positives = 127/204 (62%), Gaps = 10/204 (4%)

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D  RF+ML RKN  +LDFDF KV
Sbjct: 1   VKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKV 60

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           KEQSK+NP+FYVQYA+AR  S+ R A    P  D  L               EL LI  L
Sbjct: 61  KEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLLRTG----------GELFLIKTL 110

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P V+E A    EP+++ FYL ++A  FH  W +G+ +  +RF+  +N  LT  R+ L
Sbjct: 111 AKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGKSDLNMRFILEDNLNLTAARMFL 170

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
           V A+A +I SGL+I  +E   EMS
Sbjct: 171 VQALAHVIASGLSIFNIEPLKEMS 194


>gi|322380143|ref|ZP_08054391.1| arginyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147448|gb|EFX42100.1| arginyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 340

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 184/353 (52%), Gaps = 27/353 (7%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           K  +E+ +   +++E P+D + GH ++  A  L++     P  IA  +V R+  D +  +
Sbjct: 6   KTLLERVLQTEVILEHPKDRSLGHYASVVAFPLAKVYKKPPKIIALELVDRLLEDEECQA 65

Query: 81  VFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           VF    A  G+IN  L  S+L +  +  +  G+++G+    K   + +EFVSANPTGP+H
Sbjct: 66  VFAKIEALNGYINFTLKESFLDRFCNQALKLGVDFGKE-ADKNESLYLEFVSANPTGPLH 124

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH R A+ GD+  +L  F GY V  EYY+ND GAQI  L LS+ W     + +   + P
Sbjct: 125 IGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSL-WLAICEMQHLKVEYP 183

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
             YY G Y+  + ++  + +    LN  +      + D++ + ++  I   L  L I  +
Sbjct: 184 TEYYRGAYINELAQKALEHFPD--LNNNDPNLYATLGDFAKEVVLAQIEQSLADLGIVIE 241

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            + SE    R   +   ++   L + G VYE                + K+ L +S+M G
Sbjct: 242 NYASE----RAMFAHQEEVFKRLEQAGGVYE---------------FEGKRWL-KSSMFG 281

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           D+ DR + K+DG +TY A D+ Y   K+++GFD+ I + G+DH GYV R++A 
Sbjct: 282 DEKDRVIRKNDGDFTYIAGDITYHDYKFKQGFDHYINIFGADHHGYVARIKAA 334


>gi|295400646|ref|ZP_06810623.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977227|gb|EFG52828.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 254

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 147/242 (60%), Gaps = 5/242 (2%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +      R+K  +K   +   +  E+++ D +++E PR+ AHG  STN AM L+R   
Sbjct: 1   MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPD-VILEVPREKAHGDYSTNMAMQLARIAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE IV    +    V  + IAG GFIN Y+   YL +++  I+ +G  YG   +
Sbjct: 60  KPPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNV 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GKG KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  L
Sbjct: 120 GKGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A SV  RY QAL   D ++PE  Y G  +  +GK+LA+++  + ++  E++ L   ++Y 
Sbjct: 180 AKSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYG 238

Query: 238 VQ 239
           ++
Sbjct: 239 LR 240


>gi|58697671|ref|ZP_00372842.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58535824|gb|EAL59640.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 221

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 137/222 (61%), Gaps = 2/222 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + IV E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKRASSLILSKLNELKQRGIINTDTTNFIV-EPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           V+ RY++AL    S + +G YPG YLK +G+ LA KY  E L
Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEFL 220


>gi|205375416|ref|ZP_03228205.1| arginyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 250

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 151/250 (60%), Gaps = 5/250 (2%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +     S+LK  +K+  I   +  E++I D +++E P++ AHG  STN AM L+R   
Sbjct: 1   MNIVDQVQSKLKEEIKQAVIKAGLATEEQIPD-VILETPKEKAHGDYSTNMAMQLARVAK 59

Query: 59  LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             P  IAE + A   +    ++ + IAG GFIN Y+  SYL  ++  ++ +G  YG +  
Sbjct: 60  KAPRMIAEELTANFDRTKASIEKIEIAGPGFINFYMDNSYLTDLIPVVLKAGEAYGESDA 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G+G K+N+EFVSANPTG +H+GH R A VGD+L +++  +G+ VTREYYINDAG QI+ L
Sbjct: 120 GEGQKINVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFAVTREYYINDAGNQIHNL 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A+SV  RY QAL   +  +PE  Y G  +  + K+L D++  + +   E++     + Y 
Sbjct: 180 AMSVEARYFQAL-GQEKPMPEDGYHGADIIGIAKQLVDEFGDKYVEVDEKERYDFFRSYG 238

Query: 238 VQAMMKIIRD 247
           ++  ++ +++
Sbjct: 239 LKYELEKLKE 248


>gi|11498499|ref|NP_069727.1| arginyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334362|sp|O29368|SYR_ARCFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2649707|gb|AAB90346.1| arginyl-tRNA synthetase (argS) [Archaeoglobus fulgidus DSM 4304]
          Length = 549

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 262/579 (45%), Gaps = 83/579 (14%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R+  H  L++  A  L++     P  IA+ IV  ++++ +      +  G+IN + S  +
Sbjct: 23  RESEHADLASTIAFKLAKERKKSPKEIADEIVENLEVESEYIGSVESVNGYINFFASYEF 82

Query: 98  LRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           L   ++ I+     YG  NL G+   + IE  SANP GP+H+GH R +++GDT+A + A 
Sbjct: 83  LEDTVNVILDEDENYGHLNLKGE---ILIEHTSANPDGPLHIGHIRNSIIGDTIARIFAK 139

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           +G++V   YY+ND G Q     L +  ++       D  + E Y     L     EL ++
Sbjct: 140 AGFDVKTHYYVNDMGRQTAITVLGI-EKFGLKDKKPDHAVAEAYIEANKLLESNPELEEQ 198

Query: 217 YSSELLNFPEEKWLPIVK-DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
               +L + E     + K   +V+  ++ I+  LK +N++HD F+ E +F          
Sbjct: 199 VEKLMLAYEEGDEKTVEKFRRAVETALEGIKQTLKTINVEHDEFVWESEF---------- 248

Query: 276 IIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
                 R GYV +  GIL        ++  + +K   +   + G D +  L + +G+  Y
Sbjct: 249 -----VRNGYVGKVLGIL--------EERGLVKKNGAWTIELEGFDKEVVLRRENGTTLY 295

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              DLAY   K E  ++  I V+G+DH  Y  +L  +   +  K  +I  +  E V L  
Sbjct: 296 ITRDLAYHMWKNE-NYERFINVLGADHKLYGAQLSKILELLGLKPPEI--IFFEFVSLPE 352

Query: 394 DGMPIKMSKRAGDFITL-------------------------RHVVDEVGSDSVRFMMLW 428
                 MS R G FI+                          R + D V   ++RF  + 
Sbjct: 353 GS----MSTRRGKFISADELISKVRDEAWKILSERDMEEDEKRKIADAVAVGAIRFDFIK 408

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQ 487
               + + FD+ K  +  ++    Y+QY++AR  SI R+A +D  P+L+F          
Sbjct: 409 IAPEKHMTFDWSKALDFERQTAS-YIQYSHARACSILRKAVEDGMPELEF---------- 457

Query: 488 ESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           + E  T+ E +L++ L++ P V++       P   A YL  +A  F+  +   R++P L+
Sbjct: 458 KGELCTAGERKLVMLLSKMPYVVKRIVSELRPNVFAEYLLSVAGTFNDFY---RDHPVLK 514

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  ++ M RL +V A   ++ +GL ++G+E    M
Sbjct: 515 ----AESEVRMHRLAIVDATRVVLRNGLELLGIEPLERM 549


>gi|312136309|ref|YP_004003646.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224028|gb|ADP76884.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 558

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 273/591 (46%), Gaps = 94/591 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E P     G LSTN +  L+  LG++P+ IA  IV  ++    +  V   G  +IN 
Sbjct: 25  INLEEPPSKDLGDLSTNLSFKLASDLGMNPVDIANNIVNAMETPKYISKVETKG-PYINF 83

Query: 92  YL-----SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++     +P  L+KI  +       YG NL  K  KV +E  SANP GP+HVGH R A++
Sbjct: 84  FIDYDAFAPKLLKKIDEN-------YG-NLKSKNKKVILEHTSANPNGPLHVGHLRNAII 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVY 205
           GD+LA +M  +GY+V   YY+ND G Q+  +        +++     D ++ + YY    
Sbjct: 136 GDSLARIMRAAGYDVETHYYVNDMGRQVAMVVWGALNLEFKKEKVKKDHEIGKIYYLANK 195

Query: 206 LKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                 ++ ++ +  +  + E  +K   I K+  V+  ++ I++ LK LNI+HD F+ E 
Sbjct: 196 ALENDPKIENEVNKLMKKYEEGDKKTRKIFKNI-VKKCLEGIKETLKNLNIEHDKFVWES 254

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           DF R   S I  II+ L    Y YE                    +       G + +  
Sbjct: 255 DFVRD--SSIEKIIEKLKNTEYFYES----------------EGAICLNLEKFGIEKELI 296

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L +SDG+  Y   D+AY   K +   D +I V+GSDH    ++++ V   +  K+ +I  
Sbjct: 297 LKRSDGTSLYATRDIAYHFMKSQNA-DIVIDVLGSDHKLTAEQVKTVMKILKSKQPEI-- 353

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN---------SEL 434
           +  E + L    M    S R G F+++  +++E    ++  +   RK+         +E+
Sbjct: 354 IFYEFITLPNGSM----STRKGTFVSVDELIEESKKRAIEEIKKRRKDISESEMEKIAEI 409

Query: 435 LDFDFCK--VKEQSKENPVFY--------------VQYAYARCRSIFRQAKDIFPDLDFD 478
           +     +  + + S E  + +              +QYA+AR   + ++AK    + + D
Sbjct: 410 VSIGAIRYYIAKLSPEKHLTFKWEDVLDFEKGCASIQYAHARACKLLKKAKYKEKEYEID 469

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            +P N +         E+ LI  L+++P+++E A   ++ +  A Y  +LA+ F+  + H
Sbjct: 470 KWPLNDL---------EIDLIRILSKFPKIVETAAKTRKIHMAAQYAQELANAFNRFYKH 520

Query: 539 ----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               G E+ + R V     K+T             IN+ L ++G+++P+ M
Sbjct: 521 VPVIGSEHEKNRLVLVEKCKIT-------------INNCLKLLGIKAPSSM 558


>gi|288932335|ref|YP_003436395.1| arginyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894583|gb|ADC66120.1| arginyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 547

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 262/574 (45%), Gaps = 73/574 (12%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSP 95
           R+     LST  A  +++     P  +AE +V+ I+ +    + SV +   G+IN +++ 
Sbjct: 21  RESEFADLSTTIAFKIAKERKEPPQKVAEELVSEIEFERSTYIGSVEVVN-GYINFFVNE 79

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            +L   +  I+     YG   +  G +V IE  SANP GP+HVGH R A++GDTLA +M 
Sbjct: 80  EFLSDTVERILDEDENYGS--LNLGGEVLIEHTSANPDGPLHVGHLRNAIIGDTLARMME 137

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            +G  VT  YY+ND G QI    L  + +Y  +    D  + E Y           EL  
Sbjct: 138 KAGMRVTTHYYVNDMGRQIAAAVLG-YLKYGLSEKKPDHAVAEAYIRINRDIEENPELEK 196

Query: 216 KYSSELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +    +L F   ++ +     + V   ++ I++ L+  +I HD FI E DF         
Sbjct: 197 EVDELMLKFERGDEEISEKFRFVVDKALEGIKETLEKFDIHHDDFIYESDF--------- 247

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
                  R GYV E IL   + K   + D D  ++  +   +  +V   L + +G+  Y 
Sbjct: 248 ------VRNGYV-ERILRMLEEKGLLEKD-DVWKVDLKDYGIEKEV--ILRRENGTTLYI 297

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             DLAY   K E  F+  I V+G+DH  Y ++L  +   +  K  +  VL  E V L   
Sbjct: 298 TRDLAYHLWKNE-NFERFINVLGADHKLYSEQLSKILELLGLKPPE--VLFFEFVSLPEG 354

Query: 395 GMPIKMSKRAGDFITL-----------------RHVVDE-----VGSDSVRFMMLWRKNS 432
                MS R G F++                  R  VDE     V   ++R+  +     
Sbjct: 355 S----MSTRKGKFVSADELLEKTFEEAKKILRERGSVDERIAKIVAVGAIRYDFVKVSPE 410

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEF 491
           +   FD+ K  +  ++    Y+QY++AR  SI R+A +    +L+FD  P  +  +E E 
Sbjct: 411 KPFTFDWSKALDFERQTAS-YIQYSHARACSILRKAVEAGRTELEFD--PAIITKKERE- 466

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
                 L++ L+++   +E A    +P   A YL  +A+ F+  ++  +       V  +
Sbjct: 467 ------LVMRLSKFSFYLEKAVNELKPSVFAEYLMSVANAFNDFYTDHQ-------VLVD 513

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++++ M RL +V A   ++ +GL ++G+E+P  M
Sbjct: 514 DKRIRMHRLAIVDATRIVLRNGLELLGIEAPERM 547


>gi|307610759|emb|CBX00370.1| arginine tRNA synthetase [Legionella pneumophila 130b]
          Length = 306

 Score =  163 bits (413), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 41/268 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
            I +E  +D AHG  +TN A++L++P    P  +AE +VA I  DP V+ + IAG GFIN
Sbjct: 29  EIKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPADPSVEKIEIAGAGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  +    I+S I+  G E+G+  +G+  KV IEFVSANPTGP+HVGH R A  G TL
Sbjct: 89  FFMRSTARSLIISEILNKGKEFGQGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATL 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +++  +GY+VT EYY+NDAG Q+N LA+SV+ RY + L       P   Y G Y+  + 
Sbjct: 149 GNVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIAFPANGYKGQYVYEIA 207

Query: 211 KELADKYSSELLNFPEEKWLPIVKD----------------------------------- 235
           +E+  +  ++ ++     W+ +V +                                   
Sbjct: 208 QEMWSEQGNQFVH----PWISVVDNLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFH 263

Query: 236 -YSVQAMMKIIRDDLKALNIQHDIFISE 262
            ++++ ++  I+DDL+A  ++ D + SE
Sbjct: 264 QHALKTVLDDIKDDLQAFGVRFDSWFSE 291


>gi|52549705|gb|AAU83554.1| arginyl-tRNA synthetase [uncultured archaeon GZfos31B6]
          Length = 559

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 166/621 (26%), Positives = 275/621 (44%), Gaps = 100/621 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F S +++ LK+    +      +D + IE   + A+  L+++ +  L+      P 
Sbjct: 1   MFLKFKSEVESVLKK---ALDASGYQIDDLHIE---ESAYSDLASSLSFRLASEYRQSPA 54

Query: 63  TIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IA++I   I I  D  V  V   G  +IN ++S  +L   +  I      YG    GKG
Sbjct: 55  AIADVIADVIAIPKDSLVGEVQAVG-AYINFFVSKKFLEDTMHEIFEKKERYGTGN-GKG 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV IE  SANP GP+HVGH R +++GDTLA ++  +GY+V  +YY+ND G Q+  +A  
Sbjct: 113 -KVIIEHTSANPNGPLHVGHIRNSIIGDTLARILKTAGYDVEIQYYVNDMGRQVAIVA-- 169

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKD 235
             W   +  ++            VY++   +EL +     +   EL+   E     +++ 
Sbjct: 170 --WAMDRFEFDGQKKADHA-IADVYIR-ANQELGEDPDLVRQIDELMQRIEHGDAEMIER 225

Query: 236 YSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGIL 291
           +S    + +  I   LK +N+ HD+F+ E  F +G    + D++  L   G   + +G L
Sbjct: 226 FSSATDLAVSGITSTLKRMNVHHDLFVHESMFVKG--GEVSDLVRELKELGLTEIADGAL 283

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P                    M   D D  +L+SD +  Y   DLAY + K E+  D 
Sbjct: 284 MVP--------------------MPTFDKDLVILRSDQTSVYVTRDLAYHRWKAEQ-CDR 322

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL- 410
           MI V+G+DH     +L  V +A   K+ +I  ++ E V L        MS RAG FI+  
Sbjct: 323 MIDVLGADHKLISSQLCYVLSACGVKEPEI--VIFEFVSLPEGS----MSTRAGKFISAD 376

Query: 411 --------------------------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                                      HV  EVG  +VR+ ++     +   FD+    +
Sbjct: 377 ELLDEVEKQALTEVTKRRPDAEEDFRDHVAKEVGIGAVRYDIVKVSPEKATTFDWESALD 436

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             K    F +QY++AR  SI ++A+ I         P ++ P     D +E+  +  LA 
Sbjct: 437 FDKLGAPF-IQYSHARACSILKKAQHI---------PESIDPAMLSED-AEISFVKELAR 485

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  VI+ A+   +P+ +A Y  +LA  F+  +       RL  V +    +   R+ LV 
Sbjct: 486 FSYVIDLASRELKPHIVAIYARELAEAFNQFY-------RLSPVLSAPDDVRDARIGLVE 538

Query: 565 AVASIINSGLNIIGVESPNEM 585
               ++ S L ++G+ +P  M
Sbjct: 539 CARIVLASTLGVLGIAAPESM 559


>gi|307352773|ref|YP_003893824.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307156006|gb|ADN35386.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 554

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 265/579 (45%), Gaps = 89/579 (15%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRK 100
           H  L++  A  L++   ++P  +A  I +++K +     + +  KG +IN      YL +
Sbjct: 30  HADLASTVAFSLAKSRRMNPAALASEIASQVKDELSGKGIGVEVKGPYINFIFGKKYLEE 89

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           ++   +  G  YG +L  K  ++ +E  SANP GP+HVGH R +V+GDTL+ ++  +GY 
Sbjct: 90  VIVEALKEG--YG-SLPQKPGRICLEHTSANPNGPLHVGHIRNSVIGDTLSRVLRKAGYT 146

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +  EYY+ND G QI  ++    W +    L  N+ +  + Y   VY+       AD+   
Sbjct: 147 LEVEYYVNDMGRQIAIVS----WGFDNIGLAQNEGEKDDHYVARVYVAANRAIEADESIK 202

Query: 220 ELLN----FPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           E ++      E     +V+ +    +M +  I++ L  LN++H+ FI E DF R     +
Sbjct: 203 EEIDRRMALIENGDPEMVRKFRDAVLMCVGGIKETLLDLNVKHNRFIFESDFVRN--GLM 260

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +++  L          LP  K +     D+         T  G + +  L +SDG+  Y
Sbjct: 261 MNVLHRLE--------ALPEAKHEGVLSLDL---------TEFGFEKEYVLRRSDGTSVY 303

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            A DLAY + K +  F+ +I V+G+DH    ++L+A    + +K  +I  +  E V L  
Sbjct: 304 AARDLAYHEWKSD-NFERIINVLGADHKLIGRQLQATMQLLGDKVPEI--VFFEFVSLPE 360

Query: 394 DGMPIKMSKRAGDFIT----LRHVVDE-----------------------VGSDSVRFMM 426
                 MS RAG FI+    L HV ++                       V + ++RF +
Sbjct: 361 G----SMSTRAGKFISTDELLEHVFEKALEEVETRRPELSADEKSSIARSVATGAIRFDI 416

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +     +   FD+ +  +  K++   Y+QYA+AR  SI  +A +                
Sbjct: 417 VRVSPDKATVFDWKEALDFEKQSAP-YIQYAHARACSILEKAGEF----------EESFS 465

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            ESE+   E+ L  H+A +P+VI +      P+ LA Y  +LA +F+  +   R +P L+
Sbjct: 466 AESEY---EVALAKHIALFPKVIADVAGDLRPHVLAIYARELADLFNTFY---RFDPVLK 519

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   L   RL LV A  + +   L  +G+++   M
Sbjct: 520 ----AEGDLRNSRLTLVKAAQNTLKEALETLGIDAVRSM 554


>gi|284161225|ref|YP_003399848.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011222|gb|ADB57175.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 548

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 268/580 (46%), Gaps = 87/580 (15%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           ++  H  L+   A  L++    +P+ +A  I   ++    +  + +   G+IN + S  +
Sbjct: 24  KESDHADLACTIAFKLAKEQKRNPIEVANEIAENLEPIGYIGKIEVVN-GYINFFASEEF 82

Query: 98  LRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           L   +++I+ +   YG  N+ GK   V IE  SANP GP+H+GH R +++GD+LA +   
Sbjct: 83  LEDTINTILDTDENYGSLNMRGK---VLIEHTSANPDGPIHIGHMRNSIIGDSLARIFRK 139

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---HVGKEL 213
           +G++VT  YY+ND G QI   A++V       L  ++S  P+      Y+K    + K  
Sbjct: 140 AGFDVTTHYYVNDMGRQI---AIAVLGYRLFGL--DESKKPDHAVVEAYVKANQEIEKNP 194

Query: 214 ADKYSSELLNFPEEKWL-PIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             +   E+L    E +   +V D  Y V   ++ IR  L+ LNI HD ++ E +F +   
Sbjct: 195 ELEKEVEMLMIKYENFSDDVVGDFRYIVSKALEGIRQTLRELNIHHDDYVWESEFLKN-- 252

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  I+  L  +  +        K +     ++D K ++ R             + +G+
Sbjct: 253 GYVDRILSMLDERNLI--------KKEGAWFVELDEKPVILR-------------RENGT 291

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y   DLAY   K E  F+  + V+G+DH  Y ++L  +   ++ K  +I  +  E V 
Sbjct: 292 TLYITRDLAYHLWKNE-NFERFVNVLGADHKLYGRQLCKLLELINLKPPEI--VFFEFVS 348

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM---LWRKNSE---------LLDFD 438
           L        MS R G FI+   ++ +V  ++ + +    L R+  E          + FD
Sbjct: 349 LPEGS----MSTRKGKFISADELIAKVYDEARKIVEKRDLSREEKERIAKAVAMGAIRFD 404

Query: 439 FCKVKEQS------------KENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVI 485
           F K+  +             +     YVQYA+ARC SI R+A +   PDL+F    R  I
Sbjct: 405 FVKIAPEKPMVFDWEKALDFERQTASYVQYAHARCCSILRKAVESGMPDLEF----RPEI 460

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             + E D     L++ L+++P VIE      +P  +A YL  +A+ F+  +   R     
Sbjct: 461 CTKVERD-----LVMILSKFPYVIEKVIKDLKPNYVAEYLLSVANTFNDFYREHR----- 510

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V     ++ M RL +V AV  ++ +GL ++G+E+   M
Sbjct: 511 --VLDEVAEIRMHRLAIVDAVRIVLRNGLELLGIEALERM 548


>gi|296109097|ref|YP_003616046.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433911|gb|ADG13082.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 552

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 172/616 (27%), Positives = 278/616 (45%), Gaps = 109/616 (17%)

Query: 15  LKEIDCKIKVEKKILDR------IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +KEI  K +V+KKIL++      + ++ P     G  S N A  L++ L  +P  IAE +
Sbjct: 1   MKEI-IKEEVKKKILEKFNVDIEVNVDEPPKIEMGDFSVNVAFRLAKELKRNPKEIAEEL 59

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           V  +K++  V  + +   G+IN YL    Y R+++  I+    +YGR    K  K+ +E 
Sbjct: 60  VKDLKVE-GVKEIKVVN-GYINFYLDYEIYGRQVIGEILEKKSDYGRG--EKKEKIILEH 115

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
            SANP GP+H+GH R A++GD L  ++ F GYEV   YY+ND G Q   +AL V+   + 
Sbjct: 116 TSANPNGPLHIGHLRNAIIGDCLKRILEFYGYEVETHYYVNDMGRQ---MALVVYGIEKF 172

Query: 188 AL---YNNDSDLPEGYYP-GVYLKHVG------KELADKYSSELLNFPEEKWLPIVKDYS 237
            L      D  + E Y     YL+          EL   Y  E L   EE  +    +++
Sbjct: 173 GLDKEKKKDHAIAEVYVKINKYLEEHKEEEEKISELMKLY-EESLEKNEENEITKKFEFA 231

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   ++ I++ LK L+I+HD F+ E  + R     ++++I  L   G V   I       
Sbjct: 232 VNYALEGIKETLKNLDIEHDKFVWESSYVRN--GLVKEVIKRLMETGKV---IKEDTYLL 286

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           + +   +++K +L R              S+G+  Y   D+AY   K  R  D +I V+G
Sbjct: 287 SLEDFGIEKKMVLAR--------------SNGTSLYSTRDIAYHLDKL-RNADIVIDVLG 331

Query: 358 SDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +DH    + ++A    +  EK+ +I  +  E + L        MS R G FI+   +++E
Sbjct: 332 ADHKLTAEMVKAALKLLGCEKEPEI--VFYEFISLPEGS----MSTRKGRFISADELLEE 385

Query: 417 -------------------VGSDSVRFMM--------LWRKNSELLDFDFCKVKEQSKEN 449
                              +   SVRF +        L  +  E LDF+           
Sbjct: 386 ALKRAKEECEKRNVSVERDIALGSVRFNIAKVSPEKPLIFRWEEALDFEKVGC------- 438

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P+  +QYA+ R  SI R+A D    L+F              +  E +LI  L ++  VI
Sbjct: 439 PL--IQYAHVRASSILREAND-SESLNFSY----------NLEKEEKELIKMLDKFKEVI 485

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + +   +  + LA YL +LA  F+  +      P L+       +    RL LV A   +
Sbjct: 486 KESAEKRRVHILANYLIELAKKFNKFYEKC---PILK------SEYKRERLALVKATKIV 536

Query: 570 INSGLNIIGVESPNEM 585
           I +GLN++G+++P  M
Sbjct: 537 IKNGLNLLGIKAPERM 552


>gi|294494696|ref|YP_003541189.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665695|gb|ADE35544.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 567

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 264/586 (45%), Gaps = 84/586 (14%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLS 94
           P    H  LST  A  L+      P+ +A  IV  I++  +  ++S+   G  +IN+  +
Sbjct: 29  PEPSQHADLSTRVAFKLAAVARKSPVEVANQIVENIQLRENCLIESIGTTGP-YINIKAN 87

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            +Y+ +   ++     ++G N      K+ +E  SANP GP+HVGH R +++GDTL  ++
Sbjct: 88  RTYIDRTFETVRSKKEDFGGNFYS--GKILLEHTSANPNGPLHVGHIRNSIIGDTLTRIL 145

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY-YPGVYLKHVGKEL 213
             +GY+V  +YY+ND G QI  ++    W  +   +  D DL   +    VY+K   +  
Sbjct: 146 RKAGYDVDAQYYVNDMGRQIAIVS----WALEH--FEMDPDLKSDHAIANVYIKANARLE 199

Query: 214 AD----KYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            D    +Y   L+   E     ++K  D +V   +K IR  L  +N+ HD F++E  F R
Sbjct: 200 EDSQKVEYIDNLMQRVESGDEEVIKRFDDAVDLAVKGIRSTLLRMNVHHDSFVNESGFVR 259

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + DI+D + + G                + D+D   L+   +  G +    + + 
Sbjct: 260 S--GAVSDIVDKIRKTG----------------RVDVDDGALVVDLSDYGFEKTLVVQRR 301

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DG+  Y   DLAY + K  +  D +I ++G+DH     +L+A   AV  K+ +I  ++ E
Sbjct: 302 DGTSLYTTRDLAYHEWKTMQA-DRIIDILGADHKLISGQLKATLNAVGLKEPEI--VIFE 358

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
            V L        MS R G FIT   ++D+                           VG  
Sbjct: 359 FVSLPEG----SMSTRRGQFITADELLDKVQARAFEEVEKRRPEMSPEFMEKVAGMVGIG 414

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VR+ ++     +   FD+    +  K+   F +QY++AR  SI ++A       +  ++
Sbjct: 415 AVRYDIIKVSPEKSTVFDWKAALDFEKQGGPF-IQYSHARASSILKKAG------EEGIW 467

Query: 481 PRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                P  S   D SE+ LI  +A + +V++ A    +P+ +A Y  +LA  F+  +   
Sbjct: 468 DPASKPNPSVLTDESEITLIKQIALFDKVLKQAADDLKPHIIAIYGRELADAFNQFY--- 524

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R +P L    A   +L   RL LV     ++ + L  +G+ +P  M
Sbjct: 525 RFSPVL---GAETEELRNARLGLVDCARIVLANVLETLGMGAPESM 567


>gi|325989821|ref|YP_004249520.1| Arginyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574906|emb|CBZ40566.1| Arginyl-tRNA synthetase [Mycoplasma suis]
          Length = 556

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 262/590 (44%), Gaps = 75/590 (12%)

Query: 11  LKNYLKEIDCKIKVEKK----ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           LKN LK    K+ +E K    +LD++ +E  ++   G  STN   ++S           +
Sbjct: 5   LKNQLKASLRKV-LENKGFSLLLDKVELEETKNSKFGFFSTNLPFLISSAYKKSIEESEQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVN 124
           ++++    +  +  V  A +G++N ++SP  +     S +     I    N   K  K  
Sbjct: 64  ILISSFPKNELIQKV-EAVQGYLNFFISPDLIENFFRSSLKRRKIISRANNEENKKDKYF 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--F 182
           +E VSANPTG +H+GH R  V+ DT+++L+ ++   V R Y INDAG QI  L  S+  F
Sbjct: 123 VEIVSANPTGILHIGHIRNGVITDTISNLLEYNNNSVFRTYLINDAGTQIEELLRSIHNF 182

Query: 183 WRYQQALYNNDSDLPEG--YYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSV 238
           + +        S   E    Y G  +K   + ++ K  Y+ EL    +++    +K ++V
Sbjct: 183 YSFTSRGGVGISLTEESNVKYTGSEIKECAEAISQKFGYNWEL---TDKELTHQIKLFAV 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  I+ +LK+L+IQ D +  E        S + ++I  L  + ++Y           
Sbjct: 240 EFFLDKIKKELKSLSIQVDSWDYESRI--CSESALTNLIKKL--EDFIY----------- 284

Query: 299 TQKCDMDRKQLLFRST--MVGDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFDNMIY 354
                +    L F+++  + G + D  L+KSDG  +YF  DL Y   K ++      ++ 
Sbjct: 285 -----LKDNALWFKTSAFLEGYEKDDVLVKSDGKISYFGQDLIYHLHKLEFLGKTGTIVN 339

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            +  DH G++ R++A   ++   +  +   +  L RL  +G  I  SKR   F++   + 
Sbjct: 340 TLAEDHKGHIDRMKAFFYSIGVPQDSVKYKITRLSRLIMEGKKIVFSKRENIFLSAEELK 399

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI-------FRQ 467
           + +  D +R+ +  R     LD D  K+K +   N +FY+ YAY+R   I         +
Sbjct: 400 EHLSVDEIRWFLCSRDEENELDIDLSKLKNKDYNNQIFYILYAYSRALKITERIYFDLSE 459

Query: 468 AKDIFPDLDFDL---FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           +K  F  LD ++      +V+  E +F  +   L VH+                  ++ Y
Sbjct: 460 SKLSFEKLDSEVEQSLINSVLSVELKFQKAIQTLKVHI------------------MSDY 501

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           L+ LA  FH  +        +  +   N +  + R  LV  V  I +  L
Sbjct: 502 LFSLAKKFHSFY------ESVSVINEPNTETQITRFALVKLVLRIFSELL 545


>gi|322367961|ref|ZP_08042530.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551977|gb|EFW93622.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 583

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 262/612 (42%), Gaps = 109/612 (17%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-F 88
           D + IE P +     L+++AA  L+  +G  P  IA  I   I  D         G+G +
Sbjct: 25  DDLGIETPPEGVDAVLASSAAFRLAGEVGAPPPKIAADIADEIDADGYDHLAAAVGQGPY 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   S +Y  + + +      EYGR L   G  V +E  SANPTGP+HVG  R  + GD
Sbjct: 85  VNFLPSDTYYDETVET--AQDEEYGR-LEPTGENVVVEHTSANPTGPVHVGRARNPITGD 141

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG-------- 199
            +A ++ F+G +V R YY+NDAG QI     +VF W Y+     ++ DLP+         
Sbjct: 142 AIARILDFAGNDVDRHYYVNDAGRQI-----AVFTWAYETF---DEEDLPKPERERADYD 193

Query: 200 ---YY--PGVYLKHVGKELADKYSSEL------LNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              YY     YL+    E AD+  +++      L   +E+    V +  V  ++  +R  
Sbjct: 194 LVRYYRKGNAYLEEADPEDADEAETKIAAILQGLEENDEETYERVSEV-VDTVLSGMRVT 252

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMDRK 307
           L  L  + D F+ E  F         D++  L    + VYE               +D  
Sbjct: 253 LDRLPAEFDEFVKETQFMFD--GSTDDVVSRLKEDEHAVYE----------EDAWQLDLS 300

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +  F   +V        L+SDG+  Y   DLA+ + K +  +D  + V+G DH     +L
Sbjct: 301 EFGFEKNLV-------FLRSDGTSLYTTRDLAHHEWKLD-NYDRAVTVIGEDHKLQADQL 352

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416
                 +     ++       V L   GM    S R G  I +  ++DE           
Sbjct: 353 AQALEILGNDTDKLTSFHYSWVNLPEGGM----STREGTGIDMDDLLDEAEKRAREEVES 408

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFY 453
                                 VG  +VR+ ++ ++ ++ + F++ +  + +++  P  Y
Sbjct: 409 RMDDRIRDDDLTEADVDRIARQVGIGAVRYDIISKQPTKTITFEWERALDFEAQSAP--Y 466

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY +ARC  I  +     P    D+ P +++  ESE D     LI  +A +P VIE A 
Sbjct: 467 VQYVHARCCGILAEGDGEIP---TDIDP-SLLDSESERD-----LIEVIARFPNVIEEAA 517

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP+ +A Y  + A  F+  +   RE P L    A + ++   RL LV A    I + 
Sbjct: 518 DDLEPHAVATYTREFAETFNAFY---RECPVL---TAEDEEVRDARLALVAAAKHTIANA 571

Query: 574 LNIIGVESPNEM 585
           L +IG+E+P  M
Sbjct: 572 LGVIGIEAPESM 583


>gi|325973384|ref|YP_004250448.1| arginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651986|gb|ADX98068.1| arginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 556

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 264/590 (44%), Gaps = 75/590 (12%)

Query: 11  LKNYLKEIDCKIKVEKK----ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           LKN LK    K+ +E K    +LD++ +E  ++   G  STN   ++S           +
Sbjct: 5   LKNQLKASLRKV-LENKGFSLLLDKVELEETKNSKFGFFSTNLPFLISSAYKKSIEESEQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVN 124
           ++++    +  +  V  A +G++N ++SP  +     S +     I    N   K  K  
Sbjct: 64  ILISSFPKNELIQKV-EAVQGYLNFFISPDLIENFFRSSLKRRKIISRANNEENKKDKYF 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--F 182
           +E VSANPTG +H+GH R  V+ DT+++L+ ++   V R Y INDAG QI  L  S+  F
Sbjct: 123 VEIVSANPTGILHIGHIRNGVITDTISNLLEYNNNSVFRTYLINDAGTQIEELLRSIHNF 182

Query: 183 WRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSV 238
           + +     +  + ++     Y G  +K   + ++ K  Y+ EL    +++    +K ++V
Sbjct: 183 YSFTSRGGVGISLTEEINVKYTGSEIKECAEAISQKFGYNWEL---TDKELTHQIKLFAV 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  I+ +LK+L+IQ D +  E        S + ++I  L  + ++Y           
Sbjct: 240 EFFLDKIKKELKSLSIQVDSWDYESRI--CSESALTNLIKKL--EDFIY----------- 284

Query: 299 TQKCDMDRKQLLFRST--MVGDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFDNMIY 354
                +    L F+++  + G + D  L+KSDG  +YF  DL Y   K ++      ++ 
Sbjct: 285 -----LKDNALWFKTSAFLEGYEKDDVLVKSDGKISYFGQDLIYHLHKLEFLGKTGTIVN 339

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            +  DH G++ R++A   ++   +  +   +  L RL  +G  I  SKR   F++   + 
Sbjct: 340 TLAEDHKGHIDRMKAFFYSIGVPQDSVKYKITRLSRLIMEGKKIVFSKRENIFLSAEELK 399

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI-------FRQ 467
           + +  D +R+ +  R     LD D  K+K +   N +FY+ YAY+R   I         +
Sbjct: 400 EHLSVDEIRWFLCSRDEENELDIDLSKLKNKDYNNQIFYILYAYSRALKITERIYFDLSE 459

Query: 468 AKDIFPDLDFDL---FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           +K  F  LD ++      +V+  E +F  +   L VH+                  ++ Y
Sbjct: 460 SKLSFEKLDSEVEQSLINSVLSVELKFQKAIQTLKVHI------------------MSDY 501

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           L+ LA  FH  +        +  +   N +  + R  LV  V  I +  L
Sbjct: 502 LFSLAKKFHSFY------ESVSVINEPNTETQITRFALVKLVLRIFSELL 545


>gi|268323984|emb|CBH37572.1| arginyl-tRNA synthetase [uncultured archaeon]
          Length = 558

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 162/581 (27%), Positives = 272/581 (46%), Gaps = 91/581 (15%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101
           H  L++  A  L+R     P  IAE IV  +  +  + S  +A   +IN Y+S  +L K 
Sbjct: 32  HADLASTVAFSLARSCKRAPKEIAEDIVNHLPAENTLISHAVATGPYINFYVSDFFLHKT 91

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L  +  +G+E      GK   + IE  SAN  GP+H+GH R A++GD LA ++  +G++V
Sbjct: 92  LQRLR-AGLETVEKNKGK---IIIEHTSANADGPLHIGHLRNAIIGDVLARVLKRAGFDV 147

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--KYSS 219
             +YY+ND G QI   A++V W   +  +  D          VY+    +EL +  +Y S
Sbjct: 148 ETQYYVNDLGRQI---AVAV-WGAGRMAFATDKKADHA-VADVYIA-ANRELEEHSEYVS 201

Query: 220 ---ELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
              EL+   E      V+ Y   V   +  +++ LK LNI+HD+F+ E +F R     + 
Sbjct: 202 AVEELMRKYEAGDDATVRRYETVVNTCLTGVKETLKRLNIKHDLFVLEGEFVRS--GAVD 259

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +++ L ++G V                 +D   LL +  + G + +  + +SDG+  Y 
Sbjct: 260 AVVNELMQKGDV----------------KLDGTALLLQ--LGGIEKELVIKRSDGTSLYT 301

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             DLAY + K  R  D MI V G DH       E V+  +++  A ++V   E V     
Sbjct: 302 TRDLAYHRWKSNR-CDRMIDVFGKDH-------ELVSQQLTKALALLSVKAPEYVIFAFV 353

Query: 395 GMPI-KMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
            +P   +S RAG +I+   ++++                           VG  ++R+ M
Sbjct: 354 SLPSGSLSTRAGRYISADELIEKIEERAYYEVEKRRDDLDEVTKPEIARMVGIGALRYDM 413

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNV 484
           +     + + FDF    +  K+   F VQY++AR  SI R   AK +  D D+D    + 
Sbjct: 414 VKVSPDKHIVFDFDDALDIEKKGAPF-VQYSHARACSILRAAAAKGVLSDDDYD----SA 468

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           + +E     SEL+LI  L+++  +I       +P+++A Y  +LA  F+  +   R  P 
Sbjct: 469 LLRED----SELELIKMLSKFDYLIAGVASDLKPHRIAKYARELAEYFNLFY---RYCPV 521

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L      +RK    RL LV     ++++ L+++G+++P EM
Sbjct: 522 LN-ADEEHRK---ARLALVDCARVVLSNVLDVLGIKAPEEM 558


>gi|154149818|ref|YP_001403436.1| arginyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166232801|sp|A7I4Y2|SYR_METB6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|153998370|gb|ABS54793.1| arginyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 558

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 261/579 (45%), Gaps = 85/579 (14%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD--SVFIAGKG-FINLYLSPSYL 98
           H  L+T  A  L++     P+ IA+ +VA +K + ++    V +  KG +IN     +Y+
Sbjct: 30  HADLATTVAFALAKTKKQAPVKIAQDVVAALKNNRELSDLGVTVEAKGPYINFVFGSAYV 89

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              L + V  G  YG     +  ++ +E  SANP GP+HVGH R +++GD+LA     +G
Sbjct: 90  TAALKAAVQPG--YGSFPAKESPRIVLEHTSANPNGPLHVGHIRNSIIGDSLARAFRKAG 147

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALY-NNDSDLPEGYYPGVYL---KHVGKELA 214
           Y +  EYY+ND G QI      V W +    +  ++S+  + +   VY+   + + K+  
Sbjct: 148 YPLEVEYYVNDMGRQIAI----VTWGFDHLEHGQHESEKEDAHIARVYIAANREIEKDPG 203

Query: 215 -DKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDP 270
             K   +L+   E      VK +   V   +      LK LN++HD F+ E DF + GD 
Sbjct: 204 ITKQVDKLMELVESGDPETVKKFRREVSRCLDGFAVTLKNLNVKHDRFVWESDFVKNGDT 263

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I+NL +    +EG L            +D  +  F +  V       + +SDG+
Sbjct: 264 KAVIAKIENLPQA--THEGTL----------LALDLAEFGFTNKYV-------MRRSDGT 304

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y A DLA+   K  + FD  I V+G+DH     +L+     + EK  +I  +  E V 
Sbjct: 305 SVYAARDLAFHTWK-NQNFDRAIDVLGADHKLIGAQLQCTMQLLGEKAPEI--VHFEFVS 361

Query: 391 LYRDGMPIK-------------MSKRAGDFITL----------RHVVDEVGSDSVRFMML 427
           L    M  +             ++KRA D +T           R++ D V    +R+ ++
Sbjct: 362 LPEGSMSTRAGKFVSADELIDEVTKRAFDEVTTRRPELDEATRRNIADSVARAGIRYDIV 421

Query: 428 WRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                +   FD+ +  + + +  P  Y+QYA+AR  SI  +A   F +  +DL       
Sbjct: 422 KISPEKSTVFDWKQALDFERQSGP--YIQYAHARACSILEKA-GAFEEC-YDLATEQ--- 474

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E+ L   +A++P VIE       P+ LA Y ++LA  F+  + +    P L+
Sbjct: 475 --------EIILAKKIAKFPSVIEKVVTELRPHLLATYAHELADTFNTFYHY---EPVLK 523

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +  ++   RL LV AV + +   L  +G+++ + M
Sbjct: 524 ----SEGEVRDRRLTLVKAVQNTLQESLETLGIDAIHTM 558


>gi|327400090|ref|YP_004340929.1| Arginyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315598|gb|AEA46214.1| Arginyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 557

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 265/586 (45%), Gaps = 90/586 (15%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R+  H  L+   A  L++ +   P  +AE IV+++ I+ D         G++N + S  +
Sbjct: 24  RESEHADLACTIAFKLAKEMKKKPQEVAEEIVSQLSIESDYIGSVEVVNGYVNFFASYEF 83

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   ++ I+ S  EYG   +  G +V IE  SANP GP+H+GH R +++GDTLA +   +
Sbjct: 84  LEDTINYILDSDEEYGS--LALGGEVLIEHTSANPDGPLHIGHIRNSIIGDTLARIFRKA 141

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---------H 208
           G  VT  YY+ND G Q+   AL+V    +  L  + ++ P+      Y+           
Sbjct: 142 GVNVTTHYYVNDMGRQV---ALTVLGIEKFGL--DKTEKPDHAVAKAYIAINRYIEEHPE 196

Query: 209 VGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
              E+  K    +  + E  E+   + +D +V   ++  ++ L+ LNI HD ++ E +F 
Sbjct: 197 EKDEIEAKVEELMKKYEEGDEETAKLFRD-AVSRALEGAKETLENLNIVHDEYVWESEFI 255

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R     +  II  L  +G +          +      +D  +L ++  +V       + +
Sbjct: 256 RN--GYVDRIISMLDEKGLI----------QKDGAWTIDLSELGYKKNVV-------IRR 296

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            +G+  Y   DLAY   K E  F+  I V+G+DH     +L  +   +  K  +I  +  
Sbjct: 297 ENGTTLYVTRDLAYHLWKNE-NFERFINVLGADHKLIGSQLSDILKLIGLKPPEI--VFF 353

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-----------GSD--------------S 421
           E V L        MS R G FI+   ++D V           G D              +
Sbjct: 354 EFVSLPEGS----MSTRKGKFISADELIDRVYREAYEIIKDRGFDEKEKRDVAKAVAIGA 409

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLF 480
           +R+  +     + + FD+ K  +  ++    Y+QY++AR  SI R+A  +  PDL+F   
Sbjct: 410 LRYDFIRVAPEKPITFDWKKALDFERQTAS-YIQYSHARACSILRKAVSEGMPDLEF--- 465

Query: 481 PRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    E  T  E +L++ L+++  VIE       P   A Y+ D+A+ F+  ++  
Sbjct: 466 -------VGELCTPLERKLVMLLSKFSSVIERVVKELRPNVFAEYVMDVATTFNDFYT-- 516

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++P L+  +A  R   M RL +V A   ++ +GL ++G+E    M
Sbjct: 517 -QHPVLK-AEAEYR---MHRLAIVDACRIVLRNGLEVLGIEPLERM 557


>gi|282165349|ref|YP_003357734.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282157663|dbj|BAI62751.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 564

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 159/590 (26%), Positives = 256/590 (43%), Gaps = 99/590 (16%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           + AH  +S+     L + L  +P  IA+ IV+++     +  V  AG  ++N Y +  YL
Sbjct: 31  ESAHADVSSALPFRLGKELKKNPAQIAKEIVSKMGTSEHIGKVDAAGP-YVNFYANEKYL 89

Query: 99  RKILSSIVVSGIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            + L  I    ++ GR+   L  KG KV +E  SANPTGP+HVG  R  V+GDTLA +M 
Sbjct: 90  AESLGDI----LKKGRSSVLLPPKGVKVVLEHTSANPTGPLHVGRGRNPVIGDTLARVMR 145

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDSDLPEGYYPGVYL 206
             GY+V  +YY++D G Q  T    + W Y            +   D  + E Y     L
Sbjct: 146 SGGYDVQVQYYVDDMGKQEAT----IVWGYDHLDSLSLKPPEIEKPDHAIVEVYRAATDL 201

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDD 264
           +    E  +K  SE+LN  E     + + +   V   M   +  L  +N+ +D+F+ E  
Sbjct: 202 RK-SNEAVEKEISEILNKYEHMDPEVSEKFKKMVNTCMDGQKTTLARMNVFYDLFVWESG 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDR 322
           F +     + +I++ LA+  Y                   +RK   L    +  G D D 
Sbjct: 261 FVKN--GSVNEIVERLAKTPYA------------------ERKDGALALNLSSFGMDKDF 300

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L ++DG+  Y   D+AY   K     D  + V+G D    ++RL+A    + EKK    
Sbjct: 301 VLTRADGTSLYTTRDIAYHIWKLS-NCDEAVNVLGEDQKLAMQRLDATLKILGEKKTP-R 358

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITL---------------------------RHVVD 415
           ++    V L       +MS R G  + L                           R + D
Sbjct: 359 IVFYSFVSLPEG----RMSTRKGVVVNLDDLLDEAVARAYIEVDKRRKDLPEDKKRKIAD 414

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  ++RF ++     + + F + +  +  K+   F +QY++AR  SI  +AK   P  
Sbjct: 415 LVGIGAIRFDIIRVAPEKSITFKWEQALDFEKQGAPF-IQYSHARTCSILEKAK---PG- 469

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
            FD      + +E E    E  LI  +A  P V++ A+   +P+ LA Y  +LA  F+  
Sbjct: 470 SFD----ATVLKEKE----EAALIKKMAMLPYVVDVASKDLKPHLLANYARELAESFNQF 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       R   V +   +L   RL LV A    + + L+++G+ +P EM
Sbjct: 522 Y-------RFVPVLSAEPELREARLALVDAARITLANALDLLGIAAPEEM 564


>gi|110669121|ref|YP_658932.1| arginyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689569|sp|Q18FC1|SYR_HALWD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109626868|emb|CAJ53337.1| arginine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 596

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 154/617 (24%), Positives = 270/617 (43%), Gaps = 106/617 (17%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD------VDSVFI 83
           D + +E P +     L+++ A  L+R     P  +A+ I A I ++PD      +D V  
Sbjct: 25  DDLGVETPPEDVPATLASSVAFRLARSAKDSPPRVADDIAAAIDLEPDSQTYEYIDHVDT 84

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
            G  +IN +++ +Y    L++    G  YG +L   G  V +E  SANPTGP+HVG  R 
Sbjct: 85  RGP-YINFHVNDAYYMDTLTAAQDPG--YG-HLPNTGQSVVVEHTSANPTGPVHVGRGRN 140

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ----ALYNNDSDLPEG 199
            + GD +A L+ ++G  V R YY+NDAG Q+        W Y++    +L + + D P+ 
Sbjct: 141 TIFGDAVARLLEYNGDTVDRHYYLNDAGRQVGVFT----WAYEKFDADSLPDPERDRPD- 195

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---------VQAMMKIIRDDLK 250
            Y  V     G E  +   ++ +   E++   I+             VQ ++  + D ++
Sbjct: 196 -YDLVRYYRRGNEFLENADADAVESAEDEIASIINGLEAGNTETYERVQTVVDQVIDGMQ 254

Query: 251 ----ALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                L+   D FI E  F   GD                  + ++   KS      + D
Sbjct: 255 HSFDRLSAIFDEFIKETRFIQNGDA-----------------DAVVERLKSADCAVYEDD 297

Query: 306 RKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             Q+     +   D+++ L  L+SDG+  Y   DLA+ + K++  +D  + ++G DH   
Sbjct: 298 AWQI----DLSAYDIEKNLVFLRSDGTTLYTTRDLAHHEWKFD-NYDASVTILGEDHKLQ 352

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
            ++L+A    +     Q+       V L   G    MS R G  + L  ++DE       
Sbjct: 353 AEQLDATLQILGNDTDQLRQPFYSWVNLPEGG----MSTRKGTGVDLDDLLDEAIARARE 408

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449
                                     VG  +VR+ ++ ++ ++ + F++ +  + +++  
Sbjct: 409 EVHDRLGSRVRDDSLSSDDIDRIARQVGVGAVRYDIVSKQPTKGITFEWDRALDFEAQSA 468

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRV 508
           P  Y+QY +ARC  I  +      DLD D    + IP  +   T +E  L+  +A +P V
Sbjct: 469 P--YIQYVHARCCGIETEVNS-NTDLDIDALTSDSIPDITMLRTDAERALLQEIARFPAV 525

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E+A    EP+ +A +    A  F+  +   RE      + A +  +T  R+ LV A   
Sbjct: 526 VESAAADLEPHVIATFARSFAEQFNTFY---RE---CSVLNAESEIMTAARVSLVRAARH 579

Query: 569 IINSGLNIIGVESPNEM 585
            + + L+I+GVE+P  M
Sbjct: 580 TVANALDIVGVEAPQSM 596


>gi|253317262|ref|ZP_04840475.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 211

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/181 (44%), Positives = 110/181 (60%), Gaps = 1/181 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90
           I IE P+D  +G  +TN AM+L++    +P  IA+ IV  +  +   V  + IAG GFIN
Sbjct: 31  IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL   YL  I+   +  G ++G     KG  V +E+VSANPTG +H+GH R A VGD L
Sbjct: 91  FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++  +GY VTREYYINDAG QI  LA S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210

Query: 211 K 211
           K
Sbjct: 211 K 211


>gi|15668412|ref|NP_247208.1| arginyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501049|sp|Q57689|SYR_METJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1590971|gb|AAB98223.1| arginyl-tRNA synthetase (argS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 566

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 164/624 (26%), Positives = 277/624 (44%), Gaps = 103/624 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           D  S + N LKE+     + K+I   I I  ++  +   G  S N    L++ L  +P  
Sbjct: 2   DIKSNIINALKEV-----ISKEICKEIDIKLDKTPNLELGDYSVNICFRLAKELKKNPKI 56

Query: 64  IAELIVARIKIDPDVDSV--FIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKG 120
           IAE +V ++K   +++ V    A  G+IN Y+    + + ++  I   G  YGR    K 
Sbjct: 57  IAEELVDKLKA-MNIEGVKEIKAVNGYINFYIDYNKFAKNLMEEIDKKGNNYGRG-DKKS 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E  SANP GP+H+GH R A++GD L  ++ F GY+V   YY+ND G Q+  +   
Sbjct: 115 IKIILEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQMALVVYG 174

Query: 181 VFWRYQQALYNNDSDLPEGYYP-GVYLKHVGK------ELADKYSSELLNFPEEKWLPIV 233
           +           D  + E Y     YL+   +      EL  KY   L N  E+  +   
Sbjct: 175 IELFGLDKEKKKDHAIAETYVKINKYLEEHPEEEEKILELMRKYEDALEN-NEDNEITKK 233

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +++V   +  I++ LK LNI+HD F+ E  + R     ++ +I+ L   G V       
Sbjct: 234 FEFAVNYALDGIKETLKNLNIKHDTFVWESSYVRN--GMVKKVIEKLMETGKVI------ 285

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            K +T     +D         MV       L +++G+  Y   D+AY   K  +  D  I
Sbjct: 286 -KEETYM---LDLSDFGIEKKMV-------LARANGTSLYSTRDIAYHLDKLSK-CDIGI 333

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V+G+DH    + ++A    +  K  +  V+  E + L        MS R G FI+   +
Sbjct: 334 DVLGADHKLTAEMVKAALKLLGSKVPE--VIFYEFISLPEGS----MSTRRGRFISTDEL 387

Query: 414 VDE---------------------VGSDSVRFM---------MLWRKNSELLDFDFCKVK 443
           ++E                     +G  +VR+          M++R    L   DF KV 
Sbjct: 388 LEEAIKRAKEECNKRGVEENIAYDIGLGAVRYNIARISPEKPMVFRWEEAL---DFEKV- 443

Query: 444 EQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                    ++QYA+ARC SI ++A  K +  +  F+           E  + E +LI  
Sbjct: 444 ------GCPFIQYAHARCCSILKEAENKGVKDEAVFNY----------ELTSEEKELIKM 487

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L E+  +I+ +  ++  + LA YL +LA  F+  +++    P L     ++ K +  RL+
Sbjct: 488 LDEFKDIIKESAESRRVHILANYLLELAKAFNRFYANC---PILMTKVDDDVKKS--RLK 542

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV +  +++ +GL ++G+  P  M
Sbjct: 543 LVKSTKTVLETGLELLGINCPGRM 566


>gi|55379731|ref|YP_137581.1| arginyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74516150|sp|Q5UXX8|SYR_HALMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55232456|gb|AAV47875.1| arginyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 579

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 166/611 (27%), Positives = 266/611 (43%), Gaps = 119/611 (19%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLY 92
           IE P +     L+++ A  L+  +G  P  +A  I   I  D       +  +G ++N  
Sbjct: 29  IEEPPEDVDAVLASSVAFRLAGEVGTAPPNVASDIADAIAADDLTYVSDVTTQGPYVNFL 88

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            S +Y  + L S+  SG  +GR L  + T V +E  SANPTGP+HVG  R  ++GD +A 
Sbjct: 89  PSEAYFAETLQSVTESG--FGR-LPDRDTSVVVEHTSANPTGPVHVGRARNPIIGDAVAR 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG------------ 199
           ++ ++GY+V R YY+NDAG QI     +VF W Y+     ++ DLPE             
Sbjct: 146 VLDYAGYDVDRHYYVNDAGRQI-----AVFTWAYETF---DEDDLPEPERESPEYEMVRY 197

Query: 200 YYPGVYLKHVGK----ELADKYSSELL----NFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           Y  G  +   G     E A+     +L    +  EE +  + +   V  ++  +++ L  
Sbjct: 198 YRKGNTILEDGDPDEVEAAEAEVQSILQGLEDGDEETYERVAE--VVDTVLGGMQNTLGR 255

Query: 252 LNIQHDIFISEDDFHR-GDPSPIRDIIDNL-ARQGYVYEGILPPPKSKTTQKCDMD--RK 307
           L  + D F+ E  F R GD     D++D L      VYE        +   + D+    K
Sbjct: 256 LPAEFDEFVKETKFMRNGDTD---DLVDRLKGLDCAVYE--------EDAWQLDLPDFEK 304

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L+F             L+SDG+  Y   DLA+ + K++  +D  + V+G DH     +L
Sbjct: 305 NLVF-------------LRSDGTSLYTTRDLAHHEWKFDT-YDRAVTVLGEDHKLQADQL 350

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416
            A    +     Q+  +    V L   GM    S R G  I L  ++DE           
Sbjct: 351 AAALELLDNDTDQLRQVFYSWVNLPEGGM----STREGTGIDLDDLLDEAIDRAREEVES 406

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454
                                VG  +VR+ ++ ++ ++ + F++ +  + +++  P  YV
Sbjct: 407 RLDDRTRGDLDEDDIDRIARQVGIGAVRYDIVSKQPTKGITFEWDRALDFEAQSAP--YV 464

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +ARC  I    +   PD + DL P +        +  E  L+  LA +P VIE A  
Sbjct: 465 QYVHARCCGILGDVETDIPD-EPDLDPLS--------EPEERDLLRELARFPAVIEAAAD 515

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +A Y  DLA  F+  +   RE P L      + +    RL LV    + I + L
Sbjct: 516 DLTPHTVATYTRDLAETFNAFY---RECPVLD----ADPETRAARLALVDGTRTTIANAL 568

Query: 575 NIIGVESPNEM 585
           + +GVE+P  M
Sbjct: 569 DALGVEAPTSM 579


>gi|14591265|ref|NP_143342.1| arginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|7674343|sp|O59147|SYR_PYRHO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|256032304|pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
           Synthetase Complexed With Trna(Arg) And An Atp Analog
           (Anp)
 gi|256032306|pdb|2ZUF|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
           Synthetase Complexed With Trna(Arg)
 gi|3257902|dbj|BAA30585.1| 629aa long hypothetical arginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 629

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 157/629 (24%), Positives = 281/629 (44%), Gaps = 116/629 (18%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLS-PS 96
           D   G   T  A  L++ L   P+ IAE IV ++K++ P+      A  G+IN+++  P 
Sbjct: 35  DPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKLKLNLPEGIKDVKAVNGYINVFIDYPH 94

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           + R +++ I+  G  +G + IGKG KV +E  S NPT P+H+GH R A++GD +A ++ F
Sbjct: 95  FARILINDILAKGDRFGSSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGDVMARILRF 154

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRY---------------QQALYNNDSDLPEGYY 201
            GYEV  + YI+D G Q       V+W Y               ++ L +N    P  + 
Sbjct: 155 LGYEVEVQNYIDDLGIQF----AQVYWGYLRLKEEFERIMNELRERGLKDN----PIDHA 206

Query: 202 PGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKA---LNIQH 256
            G+    V + L D  + EL N   +  K L   + Y  +   +++R  +     L +++
Sbjct: 207 LGLLYVEVNRRLED--NPELENEIRDIMKKLESGELYGRKLAEEVVRAQMVTTYKLGVKY 264

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+ + E D  R     I   ++ L++     E    P   K      MD ++L       
Sbjct: 265 DLLVWESDIVRRKLFEI--ALELLSKN----ENFYIPSDGKYRGAFVMDLRKLF------ 312

Query: 317 GDDVDRPLL---KSDGSYTYFAADLAYFKCKYE--------RGFDNMIYVMGSDHSGYVK 365
             D+  P+L   +SDG+ TY   D+AY   K+         + +D+  +    D      
Sbjct: 313 -PDMKNPILVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKEWDSTTWTTAPDGKSMPN 371

Query: 366 RLEAVAAAVS-----EKKAQINVLLCELVRLYRDGMPI--------------KMSKRAGD 406
           +       ++     +K  Q+ +     +  + D                  K S R G 
Sbjct: 372 KFGNANIVINVIGAEQKHPQLAIKYALQLLGFEDAAANLYHLAYEHVERPEGKFSGRKGT 431

Query: 407 FITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQS----------KENP---- 450
           ++     VDEV  ++V+    ++  KN  L D +  +V E+           K +P    
Sbjct: 432 WVGF--TVDEVIQEAVKRARELIEEKNPALSDEEKAEVAEKVGIGAIRYNLIKYSPDKKI 489

Query: 451 VF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           +F              Y+QYA+ARC SI R+A++    +D +   +N     ++    E 
Sbjct: 490 IFRWEDVLNFEGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKNA--DFTKLSERER 547

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L++ L+++PR++E A    +P+ +A++  +LAS+F+  +    ++P L+  +     + 
Sbjct: 548 ELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYM---DHPVLKAEEG----VR 600

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL LV AV  ++ + L ++G+E+P  M
Sbjct: 601 EARLLLVMAVEQVLKNALYLMGIEAPERM 629


>gi|126180153|ref|YP_001048118.1| arginyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862947|gb|ABN58136.1| arginyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 555

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 250/584 (42%), Gaps = 99/584 (16%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRK 100
           H  L++  A  L++     P  IA  I  ++  +P++  V +   G ++N    P+    
Sbjct: 31  HADLASTIAFKLAKTEKRAPQKIAADIAEKLSGNPELGDVRVEAAGPYVNFRFGPT---- 86

Query: 101 ILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +LS  V   IE G   + + + +V +E  SANP GP+HVGH R  V+GDTLA     +G 
Sbjct: 87  LLSEAVREAIEPGYGALQRRSGRVVLEHTSANPNGPLHVGHIRNTVIGDTLARTFRKAGD 146

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQA-LYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +  +YY+ND G QI      V W +    +   + +  + Y   VY+    +E+     
Sbjct: 147 PLEVQYYLNDMGRQIAI----VSWGFDHLDIARKEGEKEDHYVARVYVA-ANREIEKNPG 201

Query: 219 -----SELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDP 270
                  L+   E      V  +  +V    + I+  L ALN  HD F+ E DF R GD 
Sbjct: 202 ITEEIDHLMQKVERGDAETVAKFRRAVSLCAEGIKATLAALNAHHDRFVWESDFVRIGD- 260

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  I++ + R        LP      T   D+  +         G +    L +SDG+
Sbjct: 261 --VDRIVEQVRR--------LPQAHEDETLWVDLSEQ---------GFEKKYILRRSDGT 301

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y   DLAY   K  R +D MI V+G+DH     +L A    + EK  +I  +  E V 
Sbjct: 302 SVYSTRDLAYHTWK-ARNYDRMIDVLGADHKLIGGQLRATLELLGEKAPEI--VFFEFVS 358

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK--------- 441
           L        MS RAG F++   +++EV + +  F  +  +  EL + + C          
Sbjct: 359 LPEGS----MSTRAGKFVSADELIEEVAAKA--FDEVTARRPELPEEERCAIAKSVAIAA 412

Query: 442 -----VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
                VK   +++ VF              Y+QYA+AR  SI  +A +         F R
Sbjct: 413 IRYDIVKVSPEKSTVFNWKEALDFERQSGPYIQYAHARACSILEKAGE---------FER 463

Query: 483 NVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                   F+T  E+ L  HLA +P  IE       P+ LA Y  +LA +F+  + +   
Sbjct: 464 AYT-----FETDHEVALARHLARFPAAIEQTVQELRPHLLAAYARELADLFNAFYHY--- 515

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P L+    +  +    RL LV AV + +   L  +G+++   M
Sbjct: 516 DPVLK----SEGETRNSRLALVDAVRNTLQESLETLGIDALRSM 555


>gi|219850962|ref|YP_002465394.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782973|sp|B8GJL7|SYR_METPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219545221|gb|ACL15671.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 559

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 257/605 (42%), Gaps = 98/605 (16%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           +V K   D   I       H  L++  A  L++     P  IAE +   +  +P++  + 
Sbjct: 11  RVLKACTDETEIALTDGGEHADLASTVAFALAKKRHQAPKVIAEELAVTLAANPELAGIR 70

Query: 83  IAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           +   G ++N    P YL + L + V            K  ++ +E  SANP GP+HVGH 
Sbjct: 71  VEALGPYLNFSFGPKYLEETLKAAVQDNFGTAPT---KPVRIVLEHTSANPNGPLHVGHI 127

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R +++GDTLA     +GY V  +YY+ND G QI  +A           Y  D  L  G  
Sbjct: 128 RNSILGDTLARAFRKAGYRVEVQYYVNDMGRQIAIVA-----------YGFDH-LDTGAK 175

Query: 202 PGVYLKHVGKELADKYSSELLNFPE------------EKWLPIVKDYSVQAMMKII---R 246
           PG    H    +    + +L   P+            EK  P       + + + +   +
Sbjct: 176 PGEKADHHIARVYVAANRDLEANPDKGAEIDERMQLIEKRDPATATQFRELVSRCLDGFK 235

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             ++ LN++HD FI E DF +     I D+   L R   + + + PP +   T   D+  
Sbjct: 236 VTMQGLNVKHDRFIWESDFVK-----IGDMEKVLGRLAKIPQAV-PPTEEDGTFSLDL-- 287

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
               ++ + V       L +SDG+  Y A DLAY   K  R FD +I V+G+DH     +
Sbjct: 288 SSCGYKKSYV-------LRRSDGTSVYAARDLAYHIWK-GRNFDRVIDVLGADHKLITGQ 339

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L      ++EK  +  V+  E V L    M    S RAG F++   +++E+   ++  + 
Sbjct: 340 LVCTLRLIAEKPPE--VVHFEFVSLPEGSM----STRAGTFVSADELIEEMQKRAIEEVQ 393

Query: 427 LWRKNSELLDFD------------FCKVKEQSKENPVF--------------YVQYAYAR 460
           + R    + + D            +  +K   +++ VF              YVQYA+AR
Sbjct: 394 VRRPEIPVEERDAIAASVARAAIRYDIIKVSPEKSTVFDWKEALDFDRQSGPYVQYAHAR 453

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             SI  +A        +DL        ES +   E+ L+ H+A++P +IE+      P+ 
Sbjct: 454 ACSILDRAGPF--QERYDLL-------ESPY---EIALVKHIAKFPSIIESVVRDLRPHM 501

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LA Y  DLA +F+  + +   +P L+        +   RL LV A    +   L  +G++
Sbjct: 502 LATYARDLADLFNTFYHY---DPVLK----GEGPVRESRLTLVLAAEKTLKEVLETLGID 554

Query: 581 SPNEM 585
           +   M
Sbjct: 555 ALRSM 559


>gi|289193278|ref|YP_003459219.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939728|gb|ADC70483.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 566

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 166/624 (26%), Positives = 283/624 (45%), Gaps = 103/624 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S + N LKE+  K ++ K++   I +++  +   G  S N    L++ L  +P  IA
Sbjct: 2   DIKSNIINALKEVISK-EIGKEL--DIKLDKTPNLELGDYSVNICFRLAKELKKNPKIIA 58

Query: 66  ELIVARIKIDPDVDSV--FIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           E +V ++K   +++ V    A  G+IN Y+    + + +L  I   G +YG+    KG K
Sbjct: 59  EELVDKLKA-MNIEGVKEIKAVNGYINFYIDYNKFAKHLLGDIDKKGNDYGKG-DKKGIK 116

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +E  SANP GP+H+GH R A++GD L  ++ F GY+V   YY+ND G Q   +AL V+
Sbjct: 117 IILEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQ---MALVVY 173

Query: 183 WRYQQALYNN---DSDLPEGYYP-GVYLKHVGK------ELADKYSSELLNFPEEKWLPI 232
                 L  N   D  + E Y     YL+   +      EL  +Y  + L   E   +  
Sbjct: 174 GIDLFGLDENKKKDHAIAETYVKINKYLEEHPEEEEKILELMREY-EDALEKNENNEITK 232

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +++V   +  I++ L  LNI+HD F+ E  + R     ++++I  L   G V      
Sbjct: 233 KFEFAVNYALDGIKETLNNLNIKHDTFVWESSYVRN--GLVKEVIKKLMETGKVI----- 285

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
             K +T     +D  +   +  MV       L +++G+  Y   D+AY   K  +  D  
Sbjct: 286 --KEETYM---LDLSEFGIQKKMV-------LARANGTSLYSTRDIAYHLDKLSK-CDIG 332

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I V+G+DH    + ++A    +  K  +  V+  E + L        MS R G FI+   
Sbjct: 333 IDVLGADHKLTAEMVKAALKLLGSKVPE--VIFYEFISLPEGS----MSTRRGRFISADE 386

Query: 413 VVDE---------------------VGSDSVRFMM--------LWRKNSELLDFDFCKVK 443
           +++E                     +G  +VR+ +        +  K  E LDF+     
Sbjct: 387 LLEEAIKRAKEECNKRGVEENIAYDIGLGAVRYNIARISPEKPMVFKWEEALDFEKVGCP 446

Query: 444 EQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                    ++QYA+ARC SI ++A  K +  +  F+           E    E +LI  
Sbjct: 447 ---------FIQYAHARCCSILKEAENKGVKDEAVFNY----------ELTNEEKELIKM 487

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L E+  +I+ +   ++ + LA YL +LA VF+  +++    P L     +N K +  RL+
Sbjct: 488 LDEFKDIIKESAENRKVHVLANYLLELAKVFNRFYANC---PILMTKVDDNVKKS--RLK 542

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV +  +++  GL ++G+  P  M
Sbjct: 543 LVKSTKTVLEIGLGLLGIRCPGRM 566


>gi|261403793|ref|YP_003248017.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370786|gb|ACX73535.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 566

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 162/598 (27%), Positives = 269/598 (44%), Gaps = 100/598 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV--FIAGKGFI 89
           I +E+P +   G  S N    L++ L   P  IAE IV ++K + +++ +    A  G+I
Sbjct: 25  IKLEKPPNTELGDYSVNICFKLAKLLKKSPKMIAEDIVKKLK-EKNIEGIKEIKAINGYI 83

Query: 90  NLYLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N Y+  +   K L+  I      YGR    K  K+ +E  SANP GP+H+GH R A++GD
Sbjct: 84  NFYIDNNAFAKYLTEKICEEKSNYGRGH-KKSVKIILEHTSANPNGPLHIGHLRNAIIGD 142

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYP-GV 204
            L  ++ F GY+V   YY+ND G Q   +AL V+      L  N   D  + E Y     
Sbjct: 143 CLKRILEFYGYDVETHYYVNDMGRQ---MALVVYGIELFGLDRNKKKDHAIAETYIKVNK 199

Query: 205 YLKHVGK------ELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQH 256
           YL+   +      EL  KY   L    + K   I K  +++V   +  I++ L  LNI+H
Sbjct: 200 YLEENPEEEEKILELMRKYEDAL---EKNKDTEITKKFEFAVNYALDGIKETLNNLNIKH 256

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D F+ E  + R     ++++I  L   G +        K +T     +D         MV
Sbjct: 257 DTFVWESSYVRN--GLVKEVIKKLMETGKII-------KEETYM---LDLSDFGIEKKMV 304

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                  L +++G+  Y   D+AY   K  +  D  I V+G+DH    + ++A    +  
Sbjct: 305 -------LARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLGADHKLTAEMVKAALKLLGS 356

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           K  +I  +  E + L        MS R G FI+   +++E                    
Sbjct: 357 KVPEI--IFYEFISLPEGS----MSTRRGRFISADELLEEAIKRAKEECNKRDVEENIAY 410

Query: 417 -VGSDSVRFMM--------LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
            +G  +VR+ +        +  K  E LDF+  KV          ++QYA+ARC SI ++
Sbjct: 411 DIGLGAVRYNIARISPEKPMVFKWEEALDFE--KV-------GCPFIQYAHARCCSILKE 461

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A++   + D  +F   +  +E E       LI  L E+  +I+ +   ++ + LA YL +
Sbjct: 462 AENKGIE-DEAIFNYELTKEEKE-------LIKKLDEFKDIIKESAENRKVHILANYLLE 513

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA +F+  +++    P L  ++  N  +   RL+LV +   ++  GL ++G+  P  M
Sbjct: 514 LAKIFNRFYANC---PIL--LEKVNDDVKKSRLKLVKSTKIVLEIGLGLLGINCPGRM 566


>gi|150401525|ref|YP_001325291.1| arginyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166232800|sp|A6UW07|SYR_META3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150014228|gb|ABR56679.1| arginyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 574

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 265/611 (43%), Gaps = 114/611 (18%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV--FIAGKG 87
           + I +E P   + G  STN +  L++ L   P+ IAE +   + I  +++ +    A  G
Sbjct: 23  ETIRLEEPPSISLGDYSTNISFKLAKLLKKSPMVIAEELT-NLLISENIEGIKEIKAVNG 81

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN ++  + Y +  ++ I     ++G+    K  KV IE  SANP GP+H+GH R A+V
Sbjct: 82  YINFFIDYNLYSKSGIAKISSEKDKFGQGA-PKNKKVIIEHTSANPNGPLHIGHSRNAIV 140

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQ--INTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           GD+L  ++ F+GY V  +YY+ND G Q  I    L  F   +Q     D  + E Y+   
Sbjct: 141 GDSLKRIVEFAGYVVEAQYYVNDMGRQEAIVVYGLDKFELNEQQ--KPDHAIGEVYFKAN 198

Query: 205 YLKHVGKE-------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            L +   E       L  KY  E     EE  L    +Y+V   +   ++ L  LNI HD
Sbjct: 199 QLLNENPEQEEEILKLMKKY-EEASEKGEENELTNKFNYAVNYALSGFKETLNNLNIHHD 257

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            F+ E  + +     ++ +I  L   G V                    K  ++R  +  
Sbjct: 258 KFVWESSYVKN--GMVQKVIQTLKDTGKV-------------------EKDEVYRLDLSE 296

Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             +D+ L+  + +G+  Y   D+AY   K  +  D  I ++G+DH     +L A     S
Sbjct: 297 FGIDKKLVLARLNGTSLYSTRDIAYHIDKM-KNCDIGINILGADH-----KLTAEMVNAS 350

Query: 376 EKKAQIN---VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM------- 425
            K    N   V+  E + L        MS R G FI++  + +E  + +V+ +       
Sbjct: 351 LKLLGYNTPEVVFYEFISLPEGS----MSTRRGTFISIDELYEEAKNRAVKEIKKRNETT 406

Query: 426 -----------------------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                                        M++R +  L   DF KV       PV  +QY
Sbjct: 407 EEEEINNIAHKIAVGAVRYNIVRISPDKAMVFRWDDAL---DFEKVGA-----PV--IQY 456

Query: 457 AYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           A+ARC  I  +    +  P    +LF       E + +  E  LI  L ++P+++E +  
Sbjct: 457 AHARCCRILEKENTNENKPIDATELF-------EYDLNEHEKLLIKILLKFPKIVEKSAD 509

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           A++P  +A Y  D+A  F+ ++++          +  N+ +   RL+LV    +II + L
Sbjct: 510 AKKPQIMATYALDVAQTFNRYYAN------CPIFKEENKNIVYSRLELVKCTKTIIENAL 563

Query: 575 NIIGVESPNEM 585
           N++G+E P +M
Sbjct: 564 NLLGIECPGKM 574


>gi|256810399|ref|YP_003127768.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793599|gb|ACV24268.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 566

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 156/592 (26%), Positives = 265/592 (44%), Gaps = 88/592 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90
           I +++  +   G  S N    L++ L  +P  IAE IV ++K ++ +      A  G+IN
Sbjct: 25  IKLDKTPNLELGDYSVNICFRLAKELKKNPKVIAEEIVEKLKAMNIEGIKEIKAVNGYIN 84

Query: 91  LYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            Y+    + + ++  I   G  YG+    KG K+ +E  SANP GP+H+GH R A++GD 
Sbjct: 85  FYIDYNKFAKNLVEEIDKKGNNYGKG-DKKGVKIILEHTSANPNGPLHIGHLRNAIIGDC 143

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-GVYLKH 208
           L  ++ F GY+V   YY+ND G Q+  +   +           D  + E Y     YL+ 
Sbjct: 144 LKRILEFYGYDVETHYYVNDMGRQMALVVYGIELFGLDKEKKKDHAIAETYVKINKYLEE 203

Query: 209 VGK------ELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFI 260
             +      EL  +Y   L    + +   +VK  +++V   +  I++ L  LNI+HD F+
Sbjct: 204 HPEEEEKILELMREYEDALEKNEDNE---VVKKFEFAVNYALDGIKETLNNLNIKHDTFV 260

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  + R     +++++  L   G V        K +T     +D      +  MV    
Sbjct: 261 WESTYVRN--GMVKEVLKRLMETGKVV-------KEETYM---LDLSDFGIQKKMV---- 304

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
              L +++G+  Y   D+AY   K  +  D  I V+G+DH    + ++A    +  K  +
Sbjct: 305 ---LARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLGADHKLTAEMVKAALKLLGSKVPE 360

Query: 381 INVLLCELVRLYRDGMPIKMS-------------KRAGDFITLRHVVDEVGSD----SVR 423
             V+  E + L    M  +               KRA +    R V +E+  D    +VR
Sbjct: 361 --VIFYEFISLPEGSMSTRRGRFISTDELLEEAIKRAKEECKKRWVEEEIAKDIGLGAVR 418

Query: 424 FMM--------LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFP 473
           + +        +  K  E LDF+  KV          ++QYA+ARC SI ++A  K +  
Sbjct: 419 YNIARISPEKPMIFKWEEALDFE--KV-------GCPFIQYAHARCCSILKEAEKKGVKD 469

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +  FD           E    E +LI  L E+  +I+ +   ++ + LA YL +LA VF+
Sbjct: 470 EALFDY----------ELTNEEKELIKMLDEFKDMIKESAENRKVHVLANYLLELAKVFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +++    P L     +N K +  RL+LV +  ++I  GL ++G+  P  M
Sbjct: 520 RFYANC---PILMTKVDDNIKKS--RLKLVKSTKAVIEIGLGLLGINCPGRM 566


>gi|147920891|ref|YP_685302.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121688069|sp|Q0W6L7|SYR_UNCMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110620698|emb|CAJ35976.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 563

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 244/590 (41%), Gaps = 100/590 (16%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           +  H  +S++    L++ L  +P  IA  IV ++     +D V   G  +IN Y S  Y+
Sbjct: 31  ESQHADVSSSLPFRLAKELKKNPKEIAAAIVEKMGKSEYIDRVEATG-AYINFYASQKYI 89

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              L  I+     +   L   G KV +E  SANPTGP+HVG  R  ++GDTLA L+   G
Sbjct: 90  TDSLKEILSEKKFF--ELEPNGIKVILEHTSANPTGPLHVGRGRNPIIGDTLARLLRAGG 147

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQ----ALYNNDSDLPEGYYPGVYLKHV----G 210
           Y++  +YY++D G Q  T    + W Y           D+D P+     VY         
Sbjct: 148 YDLEVQYYVDDMGKQEAT----IVWGYDHLDRIKPGKPDTDKPDHEIVEVYRAATDLRKS 203

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            E  +K  SE+LN  E         +   V+  ++  +  L  +N+ +D F+ E DF R 
Sbjct: 204 DEAVEKEISEILNAYEHMDPATAVKFREMVERCLEGQKMTLARMNVFYDRFVWESDFVRD 263

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +   +  LA   Y            TT+        L    +  G D +  L ++D
Sbjct: 264 --GSVNKAVKKLAESQYA-----------TTKDG-----ALALDLSSFGMDKEFVLTRAD 305

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+  Y   D+A+   K  R  D  I V+G D    ++RL A  + + EKKA   ++    
Sbjct: 306 GTSLYTTRDIAFHVWKLAR-CDRAINVLGEDQKLAMQRLNAALSILGEKKAP-TIVFYSF 363

Query: 389 VRLYRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDS 421
           V L       +MS R G  + L                           R + + VG  +
Sbjct: 364 VSLPEG----RMSTRKGVVVNLDDLLDEAVERAYVEVDKRRKDIPEEKKRQIAEAVGIGA 419

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRF ++     + + F +    +  K+   F +QYA+ARC SI  +AK            
Sbjct: 420 VRFDIVRVAPEKSITFKWETALDFEKQGAPF-IQYAHARCCSILEKAKP----------- 467

Query: 482 RNVIPQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                   E+D S      E  L+  +A  P VI+NA+   +P+ +A Y  +LA  F+  
Sbjct: 468 -------GEYDASMLREPEEAALVKKIAMMPYVIKNASTELKPHVIAIYARELAEAFNQF 520

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       R+  V     +L   RL LV A    + + L ++G+ +  EM
Sbjct: 521 Y-------RVSPVLIAEPELKEARLALVEASRKALAASLGMLGIAAIEEM 563


>gi|73668541|ref|YP_304556.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|109895000|sp|Q46DR6|SYR_METBF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72395703|gb|AAZ69976.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 569

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 276/588 (46%), Gaps = 94/588 (15%)

Query: 40  CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPS 96
            ++  L++ AA  L+     +P  +A  IV+ ++I PD   +  V  +G  +IN + S  
Sbjct: 34  SSYADLASRAAFRLASLYRQNPKELATRIVSAVEI-PDGSYIGKVSASGP-YINFHASRR 91

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y+ K +++++    ++G        K+ +E  SANP GP+HVGH R +++GDTLA ++  
Sbjct: 92  YMDKTVATVLEEKEKFGCG--APKDKILLEHTSANPNGPLHVGHIRNSIIGDTLARILRR 149

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALY-NNDSDLPEGYYPGVYLK-HVGKELA 214
           +GY+V  +YY+ND G QI  ++ +   R++  L   +DS + +     VY+K +V  +  
Sbjct: 150 AGYDVEVQYYVNDMGRQIAVVSWAC-ERFELDLSRKSDSAIAD-----VYIKANVELDKN 203

Query: 215 DKYSSELLNFPEEKWLPIVKDY-----SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +Y  E+    E+     VK       +V   +  I++ L  LN+ HD F+SE  F +  
Sbjct: 204 PEYVKEIDALMEKVEAGDVKTIDSFYKAVSLAISGIKETLLRLNVVHDKFVSESTFLKS- 262

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC-DMDRKQLLFRSTMVGDDVDRPLLKSD 328
              + DI++ +   G          ++KT +    +D     F+ T+V       + +S+
Sbjct: 263 -GAVHDIVERIKATG----------RTKTDKGALVVDLSDYGFKKTLV-------IQRSN 304

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+  Y   DLAY + K  +  D +I + G+DH     +L A   ++  K+ +  V++ E 
Sbjct: 305 GTSLYTTRDLAYHEWKAGQA-DRIIDIFGADHKLISGQLRATLNSIGVKEPE--VVIFEF 361

Query: 389 VRLYRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDS 421
           V L        MS R G FI+                            + V + VG  +
Sbjct: 362 VSLPEGS----MSTRRGQFISADELFDRVTEAALEQVETRRPETSEEFKKQVAEMVGIGA 417

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-DLDFDLF 480
           VR+ ++     +   F++ +  +  K+    Y+QY++AR  SI  +AK+    +   ++ 
Sbjct: 418 VRYDIVRVSPEKSTVFNWKEALDFEKQGAP-YIQYSHARACSILEKAKEEAAWNSSAEID 476

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P  ++      + +E+ LI  +A + RVI+ A    +P+ LA Y  +LA  F+  +    
Sbjct: 477 PSLLV------EDTEIDLIKKMASFDRVIDLAARELKPHVLAIYARELADAFNQFY---- 526

Query: 541 ENPRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                RFV    A + K+   RL LV+    ++ + L+ +G+ +P  M
Sbjct: 527 -----RFVPVIAAEDEKVRASRLALVNCARIVLANSLDTLGIAAPESM 569


>gi|76800688|ref|YP_325696.1| arginyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|109895007|sp|Q3IUQ6|SYR_NATPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76556553|emb|CAI48124.1| arginine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 580

 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 250/554 (45%), Gaps = 113/554 (20%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++N + S +Y  + L +      E    L  K T V +E  SANPTGP+HVG  R  ++G
Sbjct: 84  YLNFFPSEAYFEEALEA---GQSERFGELDSKDTSVVVEHTSANPTGPVHVGRARNPIIG 140

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPE-----GYY 201
           D +A+L++++GY+V R YY+NDAG Q     ++VF W Y+     ++SDLPE       Y
Sbjct: 141 DAVANLLSYAGYDVDRHYYVNDAGRQ-----MAVFTWAYETF---DESDLPEPARDRAEY 192

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---------VQAMMKIIRDDLKA- 251
             V     G E  +    + +   E +   I++            V  ++  + D +KA 
Sbjct: 193 RMVRYYRKGNEYLENADPDAVEAAEAEIQDILQGLEDGDEATYERVGEVVDTVLDGMKAC 252

Query: 252 ---LNIQHDIFISEDDFHRGDPSPIRDIIDNL-ARQGYVYEGILPPPKSKTTQKCDMDRK 307
              L  + D F+ E  F R       D++D L A  G VYE                D  
Sbjct: 253 LARLPAEFDEFVKETQFMRD--GSTDDVVDRLQALDGAVYED---------------DAW 295

Query: 308 QLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           QL F       D+D+ L  L++DG+  Y   D+A+ + K++  +D  + V+G DH     
Sbjct: 296 QLAFA------DIDKNLVFLRADGTSLYTTRDIAHHEWKFDT-YDRAVTVLGEDHKLQAS 348

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +L    + +     Q++ ++   V L       KMS R G  + L  ++DE         
Sbjct: 349 QLRETLSLLGNDVDQLDNVIYSYVNLPEG----KMSTRRGTGVQLDDLLDEAIDRAREEV 404

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPV 451
                                   VG  +VR+ ++ ++ S+ + F++ +  + +++  P 
Sbjct: 405 ETRLGDRLRDDDLDEADVERIAEQVGIGAVRYDIVAKQPSKAITFEWDRALDFEAQSAP- 463

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY +ARC  I  +A  + P+         + P +++   +E  L+  +A  P VIE+
Sbjct: 464 -YVQYVHARCCGILDEADGLDPEA-------TIAPLDTD---AERDLLRTVARLPGVIES 512

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P+K+A Y   LA  F+  +   RE P      A++ ++   RL LV A    + 
Sbjct: 513 AADDHQPHKIATYTRRLADRFNTFY---RECP---VTTADDAEVRRARLALVAAARHAMA 566

Query: 572 SGLNIIGVESPNEM 585
           + L+I+GVE+P  M
Sbjct: 567 NALDILGVEAPESM 580


>gi|292654504|ref|YP_003534401.1| arginyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371974|gb|ADE04201.1| arginyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 587

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 159/614 (25%), Positives = 275/614 (44%), Gaps = 109/614 (17%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGF 88
           D + +E P +     L+++ A  L+  +G  P  IA  I   + ++  D  +       +
Sbjct: 25  DDLGVEEPPEDVPATLASSVAFRLAGVVGAPPPKIAADIAEELSVEGYDYLAAVDTQGPY 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N ++S +Y    L +   S   YGR L   G  V +E  SANPTGP+HVG  R  V+GD
Sbjct: 85  VNFHVSDAYYDDTLDA-AASDEAYGR-LPATGDSVVVEHTSANPTGPVHVGRTRNPVIGD 142

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDS------------D 195
            +A+L+ F+G +V R YY+NDAG Q     ++VF W Y+   ++ D             D
Sbjct: 143 AVANLLDFAGNDVDRHYYVNDAGRQ-----MAVFTWAYET--FDEDDLESEPARERVEYD 195

Query: 196 LPEGYYPG-VYLKHVGKELADKYSSELLNF-------PEEKWLPIVKDYSVQAMMKIIRD 247
           L   Y  G  +L+    E  ++  +E+           EE +  +  +  V  ++  +R+
Sbjct: 196 LVRYYRKGNAFLEEADPEEVERAEAEITEILQGIEEGDEETYARV--ETVVDQVLGGMRE 253

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMD- 305
            L+ L  + D F+ E  F        RD+ + L    + VYE        +   + ++D 
Sbjct: 254 CLERLPAEFDEFVKETRFMFD--GSTRDLAERLKETDHAVYE--------EDAWQLELDD 303

Query: 306 ---RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-- 360
               K L+F             L+SD +  Y   DLA+ + K++  +D  + V+G DH  
Sbjct: 304 YGFEKNLVF-------------LRSDDTSLYTTRDLAHHEWKFD-NYDRAVTVLGEDHKL 349

Query: 361 -SGY-----------VKRLEAV---------AAAVSEKKAQ---INVLLCELVRLYRDGM 396
            SG            V +LE V            +S +K     ++ LL E +   RD +
Sbjct: 350 QSGQLRAALDILGNDVDKLENVIYSWVNLPGGETMSTRKGTGVMLDDLLDEAIDRARDEV 409

Query: 397 PIKMSKRA----GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPV 451
             ++  R      D   +  +  +VG  +VR+ ++ ++ ++ + F++ +    +++  P 
Sbjct: 410 ETRLEGRTRDDDLDEADIDRIARQVGIGAVRYDIVSKQPTKTITFEWDQALNFEAQSAP- 468

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QY +ARC  I  +A      LD       V+  ++E D     L+  +A +P V+E 
Sbjct: 469 -YIQYVHARCCGIADEAA--TAGLDASEADPAVLTTDAERD-----LLATIARFPAVVET 520

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP+ +A +  +LA VF+  +   RE P L      + ++   RL LV A  + + 
Sbjct: 521 AADDLEPHTVATFARELAEVFNTFY---RECPVLD----ADEEVGAARLALVEASRNAVA 573

Query: 572 SGLNIIGVESPNEM 585
           + L I+GVE+P  M
Sbjct: 574 NALAIVGVEAPESM 587


>gi|167946398|ref|ZP_02533472.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 228

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 18/216 (8%)

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +  ++  IRDDL    + +D + SE      +   +   I+ L   G+VYE        
Sbjct: 31  GLNTILDDIRDDLSLFGVNYDEWYSERSLT--ESGAVNKAIERLRGSGHVYE-------- 80

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L F+ST  GD+ DR +++ +G  TYFA+D+AY   K ERGF+ +I + 
Sbjct: 81  --------KNGALWFKSTDYGDEKDRVVVRDNGQTTYFASDIAYHMDKLERGFERVIDIW 132

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYV R++A   AV +  ++++VLL +   LYR G   +MS R+G+F+TLR +  E
Sbjct: 133 GADHHGYVPRVKAAMQAVGDDPSKLDVLLVQFAILYRGGEKAQMSTRSGEFVTLRELRKE 192

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           VG+D+ RF  + RK  + LDFD    K QS +NPV+
Sbjct: 193 VGTDAARFFYVMRKCEQHLDFDLDLAKSQSSDNPVY 228


>gi|88604070|ref|YP_504248.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|109895001|sp|Q2FS66|SYR_METHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88189532|gb|ABD42529.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 555

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 246/583 (42%), Gaps = 96/583 (16%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLR 99
           H  +++  A  L++ L   P  IA+ I   I  ++  +  +   A   ++N      Y  
Sbjct: 30  HADVASTIAFSLAKELRKAPAIIAQEIAGAISDQVMAETGAETRAVGPYVNFIFGAEYCM 89

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +L   V  G   G+    K  +V +E  SANP GP+HVGH R  ++GDTLA     +GY
Sbjct: 90  NVLEQAVREGYGKGQE---KSERVVLEHTSANPNGPLHVGHIRNTIIGDTLARCFRKAGY 146

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELA-D 215
            +  +YY+ND G QI  +A  +  +          D        VY+   +H+ KE A +
Sbjct: 147 PLEVQYYVNDMGRQIAIVAWGIATQGADIHAEGKGD---HLIADVYIEANRHLEKEPALN 203

Query: 216 KYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSP 272
                L+   E      +  +   V+  +   +D L A++++HD FI E DF R GD + 
Sbjct: 204 AEIDRLMQLVESGDPDTISQFKIPVKRCLDGFKDTLAAMHVKHDRFIYESDFIRNGDTAK 263

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   I +L             P+++  +   +D     F    +       L +SDG+  
Sbjct: 264 VLSRISHL-------------PEARIEETLSLDLSAFGFEKNYI-------LRRSDGTSV 303

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+A+   K    FD +I V+G+DH     +L+A    + E+  +I  +  E V L 
Sbjct: 304 YAARDIAFHIWK-GHNFDRVIDVLGADHKLIGTQLQATLEILGERVPEI--VFFEFVSLP 360

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM--LWRKNSELLDFDFCKVKEQ----- 445
                  MS R G FI+     DE+ +++ R  M  +  + SEL + +  K+        
Sbjct: 361 EG----SMSTRKGKFIS----ADELIAETERRAMEEVTARRSELSEEERKKIAHSVAISA 412

Query: 446 ---------SKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
                     +++ VF              Y+QYA+AR  SI  +A+   P  +      
Sbjct: 413 IRYDIIRTIPEKSTVFDWKEALDFEKQSGPYIQYAHARACSILEKAESYTPCFE------ 466

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                E E    E+ L   +A +P+VI       +P+ LA Y  +LA +F+  +      
Sbjct: 467 ----AEGE---GEIALTKQIALFPKVITEVVTELKPHLLAIYARELADIFNSFY---HAE 516

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P LR       K+   RL LV A  + +   L  +G+++   M
Sbjct: 517 PVLR----AEGKIRDRRLTLVDATRNTLKEALETLGIDALRAM 555


>gi|167945582|ref|ZP_02532656.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
 gi|110589102|gb|ABG77060.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 188

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/145 (46%), Positives = 95/145 (65%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IER RD  HG  +TN A++L++P    P  +AE ++A +     ++   IAG GFIN YL
Sbjct: 32  IERARDPRHGDFATNVALVLAKPARSKPRDLAEKLMAALPASAMIEKTEIAGPGFINFYL 91

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S      ++ +I+  G +YGR+ +G+G +V +EFVSANPTGP+HVGH R A  G  +A L
Sbjct: 92  SADAYHALVPAILEQGPDYGRSDLGQGKRVQVEFVSANPTGPLHVGHGRGAAYGSVVADL 151

Query: 154 MAFSGYEVTREYYINDAGAQINTLA 178
           +A  GY+V REYY+NDAG Q++ L 
Sbjct: 152 LAAVGYDVHREYYVNDAGRQMDILG 176


>gi|91773687|ref|YP_566379.1| arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121691659|sp|Q12V97|SYR_METBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91712702|gb|ABE52629.1| Arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 567

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 260/605 (42%), Gaps = 132/605 (21%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLR 99
           H  LS+  A  L+      P  +AE I   I I     V+ V   G  ++N++   +++ 
Sbjct: 34  HADLSSRIAFRLASVAKQSPKDVAEKIAGEIVIPKGSFVEKVEALGP-YLNIWAGRNFIE 92

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             + +I      +G N      ++ +E  SANP GP+HVGH R +++GDTL  ++  +GY
Sbjct: 93  GTVLAIREQKEAFGGNF--SEGRILLEHTSANPNGPLHVGHIRNSIIGDTLGRILKRAGY 150

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V   YY+ND G QI  ++ ++ +        ++S  P+     VY+         K ++
Sbjct: 151 DVELHYYVNDMGRQIAIVSWALGY-----FEFDESSKPDHAIADVYI---------KANA 196

Query: 220 ELLNFPE-----EKWLPIVK----------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           EL   PE     +K + +V+          D +V   +  I++ LK +N+ HD F  E  
Sbjct: 197 ELNAHPEKVAEIDKLMQLVEKGDAATIETFDKAVDLAVSGIKETLKKMNVAHDEFPKESS 256

Query: 265 FHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL-------FRSTMV 316
           F R GD S I + I                   K T + ++D   L+       F+ T+V
Sbjct: 257 FIRSGDVSRIIEEI-------------------KATGRTEIDNGALVVNLQDYGFKKTLV 297

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                  + ++DG+  Y   DLAY + K ER  D +I V G+DH     +L+A   A+ +
Sbjct: 298 -------IQRTDGTSLYTTRDLAYHEWKGERA-DRIIDVFGADHKLISGQLKATLNAIGK 349

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           K+ +   ++ E V L        MS R+G FI+   ++D+                    
Sbjct: 350 KEPEF--VIFEFVSLPEG----SMSTRSGKFISADDLLDQIKTQAYEEVDKRRPDMPDDF 403

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +VR+ ++     +   FD+ +  +  K+   F +QY++AR  SI ++AK
Sbjct: 404 KATVAEIVGIGAVRYDIVKVSPEKSTVFDWKEALDFEKQGGPF-IQYSHARACSILQKAK 462

Query: 470 DIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           D             +   E   +T      SE+ LI  +A +  +++       P+  A 
Sbjct: 463 D-----------EGLWSSEEPINTTLLVEDSEVSLIKKMAMFDNMLDQCAKELRPHTFAI 511

Query: 524 YLYDLASVFHGHWSHGRENPRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           Y  +LA  F         N   RFV    A + +L   R+ LV     ++ + L+ +G+ 
Sbjct: 512 YARELADAF---------NQFYRFVSVLNAEDEQLRSSRIALVDCARMVLANTLDTLGLG 562

Query: 581 SPNEM 585
           +P  M
Sbjct: 563 APESM 567


>gi|222445526|ref|ZP_03608041.1| hypothetical protein METSMIALI_01166 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435091|gb|EEE42256.1| hypothetical protein METSMIALI_01166 [Methanobrevibacter smithii
           DSM 2375]
          Length = 575

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 267/598 (44%), Gaps = 107/598 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P +   G L++  A  L++ L   P  IA  IV +++I P++     A   ++N ++
Sbjct: 39  LEFPPNPDMGDLASTIAFSLAKKLRKAPNLIASEIVEKLEI-PEIFEKVEAIGPYVNFFI 97

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S   K L   V  G +YG+ L     K+ +E  SANP GP+H+GH R ++ GD+L  L
Sbjct: 98  DYSNFSKKLLEYV--GKDYGQ-LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRL 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGK 211
           +  +G EV  +YY+ND G QI   A+ VF   +  L   + + D  +     +Y K   K
Sbjct: 155 LKVAGREVETQYYVNDMGRQI---AIIVFGITELGLKIEDQEGDKIDHKIGRLYFKANQK 211

Query: 212 ELADK-YSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
              D+   S + N  E      E  L  + +  V++ +  I++ L  +NI HD F+ E  
Sbjct: 212 LNEDESLVSHVDNLIERYEGGAEPELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQ 271

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           F R     + D+I     +G+V  G +    +     C    K+ + R            
Sbjct: 272 FVRS--GEVDDMIKYFDHEGFVSYGDV----TYIDLTCFQIEKEFVLR------------ 313

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +SDG+  Y   DLAY + K  +G D ++ ++GSDH     +L A          QINV+
Sbjct: 314 -RSDGTSLYSTRDLAYHRYKATQG-DVVLDILGSDH-----KLAA---------QQINVI 357

Query: 385 LCELVR------LYRDGMPI---KMSKRAGDFITLRHVVDE------------------- 416
             E++R      ++ + + +    MS R G F+++  +VDE                   
Sbjct: 358 FKEILREIPPEVIFYEFITLPSGSMSTRKGVFVSVDELVDEAVKRAADEIKSRNPDLTDE 417

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQ 467
                   +G  ++RF +      + L F + +    S E     +QYA+AR C+ + + 
Sbjct: 418 EIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDEA--LSFERGCASIQYAHARACKLLKKS 475

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            KD+      D    + +P E+E D     LI  +A++P+VIE+    +  + +  Y  D
Sbjct: 476 GKDVSSLAVSD----DWVPNENEKD-----LIRTIAKFPQVIEDCANKKRIHNITQYCQD 526

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LAS F+  +         +  Q     +   RL LV    + + + L+I+GV +P +M
Sbjct: 527 LASAFNKFY---------KAEQVIGSDVEDTRLVLVDRAKTTLKNALDILGVPAPQKM 575


>gi|261349916|ref|ZP_05975333.1| arginine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860699|gb|EFC92997.1| arginine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 575

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 267/598 (44%), Gaps = 107/598 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P +   G L++  A  L++ L   P  IA  IV +++I P++     A   ++N ++
Sbjct: 39  LEFPPNPDMGDLASTIAFSLAKKLRKAPNLIASEIVEKLEI-PEIFEKVEAIGPYVNFFI 97

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S   K L   V  G +YG+ L     K+ +E  SANP GP+H+GH R ++ GD+L  L
Sbjct: 98  DYSNFSKKLLEYV--GKDYGQ-LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRL 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGK 211
           +  +G EV  +YY+ND G QI   A+ VF   +  L   + + D  +     +Y K   K
Sbjct: 155 LKVAGREVETQYYVNDMGRQI---AIIVFGITELGLKIEDQEGDKIDHKIGRLYFKANQK 211

Query: 212 ELADK-YSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
              D+   S + N  E      E  L  + +  V++ +  I++ L  +NI HD F+ E  
Sbjct: 212 LNEDESLVSHVDNLIERYEGGAEPELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQ 271

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           F R     + D+I     +G+V  G +    +     C    K+ + R            
Sbjct: 272 FVRS--GEVDDMIKYFDHEGFVSYGDV----TYIDLTCFQIEKEFVLR------------ 313

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +SDG+  Y   DLAY + K  +G D ++ ++GSDH     +L A          QINV+
Sbjct: 314 -RSDGTSLYSTRDLAYHRYKATQG-DVVLDILGSDH-----KLAA---------QQINVI 357

Query: 385 LCELVR------LYRDGMPI---KMSKRAGDFITLRHVVDE------------------- 416
             E++R      ++ + + +    MS R G F+++  +VDE                   
Sbjct: 358 FKEILREIPPEVIFYEFITLPSGSMSTRKGVFVSVDELVDEAVKRATDEIKSRNPDLTDE 417

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQ 467
                   +G  ++RF +      + L F + +    S E     +QYA+AR C+ + + 
Sbjct: 418 EIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDEA--LSFERGCASIQYAHARACKLLKKS 475

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            KD+      D    + +P E+E D     LI  +A++P+VIE+    +  + +  Y  D
Sbjct: 476 GKDVSSLAVSD----DWVPNENEKD-----LIRTIAKFPQVIEDCANKKRIHNITQYCQD 526

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LAS F+  +         +  Q     +   RL LV    + + + L+I+GV +P +M
Sbjct: 527 LASAFNKFY---------KAEQVIGSDVEDTRLVLVDRAKTTLKNALDILGVPAPQKM 575


>gi|159906015|ref|YP_001549677.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686996|sp|A9AAS2|SYR_METM6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|159887508|gb|ABX02445.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 566

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 156/609 (25%), Positives = 267/609 (43%), Gaps = 122/609 (20%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFI 89
           I +E P     G  STN +  L++ L   P  IAE I   + I     +++V     G+I
Sbjct: 25  IRLEEPPAINMGDYSTNISFRLAKDLKKAPKMIAEDIANSLSISGIERIEAV----NGYI 80

Query: 90  NLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N +++ P + ++ +S I      +G+ L  +G KV +E  SANP GP H+GH R  V+GD
Sbjct: 81  NFFMNYPDFSKETVSKITSEKENFGK-LEKRGEKVILEHTSANPNGPFHIGHGRNMVIGD 139

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVY 205
           +L  ++  SGY+V  +YY+ND G Q    A+ VF   +  L  +   D  + E Y     
Sbjct: 140 SLKRILIASGYDVETQYYVNDMGRQ---EAIVVFGNERFELDKSKKADHAIGEVYVETNK 196

Query: 206 LKHVGKELADKYSSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           L    +EL  +  + + N+             EK+   V DYS+       ++ L  LNI
Sbjct: 197 LLAENEELEQEILNLMKNYESACEAGIENELTEKFKNAV-DYSLGGF----KETLSTLNI 251

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
            HD F+ E +F +     +RD+I  L   G V E                     +FR  
Sbjct: 252 YHDKFVWESEFVKS--GMVRDVIKRLMDTGKVVE-------------------DEVFRLD 290

Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +    +++ L+  + +G+  Y   D+AY   K E   D  + ++G+DH      +    A
Sbjct: 291 LSDYGLEKKLVLARLNGTSLYSTRDIAYHINKME-NCDFAVNLLGADHKLTAVLVNKTLA 349

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------------- 419
            +   +A+  V+  E + L        MS R G FI++  + +E  S             
Sbjct: 350 LLGYNEAE--VVFYEFISLPEGS----MSTRRGRFISMDELFEEAKSRAAEEVRKRGVAQ 403

Query: 420 --------------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                          +VR+          M++R + E LDF+           PV  +QY
Sbjct: 404 SEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQY 453

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+ARC  I    ++I  D   +LF         E + +E  ++  L++ P+++E A   +
Sbjct: 454 AHARCSRILENVENISND---NLFAY-------EMNENEKTIVKLLSKLPKIVEKAAEVR 503

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +A Y+ D+A  F+  +++    P L+     N  +   RL +V    +++ + L++
Sbjct: 504 KPQIVANYVLDVAQGFNKFYANC---PVLK---EENETIKNSRLAIVSTTKTVLENTLDL 557

Query: 577 IGVESPNEM 585
           +G+E P +M
Sbjct: 558 LGIEMPGKM 566


>gi|319955938|ref|YP_004167201.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418342|gb|ADV45452.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 565

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 160/573 (27%), Positives = 253/573 (44%), Gaps = 83/573 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ LG +P  IA+ IV  +  +P +    IAG GFINL LSP +L   L
Sbjct: 36  GDYQFNGAMPLAKKLGKNPRQIAQEIVEALPENPILSKAEIAGPGFINLTLSPKWLAARL 95

Query: 103 SSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                   +  GR    +  +V +++ S N    MHVGH R  ++GD+LA+L AF G EV
Sbjct: 96  EEAARDERLGVGRQ--SEPKRVVVDYSSPNMAKQMHVGHLRSTIIGDSLANLFAFLGDEV 153

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            R+ +I D G Q   L   +             +L EG    ++      +L + Y +  
Sbjct: 154 IRQNHIGDWGTQFGMLIAYL------------EELGEGAEGSLH------DLEEFYKAAK 195

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             F E+       D S + ++K+   D+K L++  + FI +   H  +      +   L 
Sbjct: 196 KRFDEDAAFA---DKSREYVVKLQGGDVKCLHLWEN-FIDKSLGHCEEVYSKLHV--RLT 249

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSYTYFA 335
           R+    E        K  +  D+  K LL  S     +  DD + PL+  KSDG + Y  
Sbjct: 250 REDVKAESSYNDDLQKIVE--DLQAKGLLKESRGAKVVFTDDEENPLIIQKSDGGFLYAT 307

Query: 336 ADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA-------VSEKKAQINVLLCE 387
            DLA  + +  E G   + YV+ +  +G+ K++ AVA         V  +     ++L +
Sbjct: 308 TDLAAIRFRVKELGAKRISYVVDARQAGHFKQVFAVARMAGYAPEDVRLEHVSFGMMLDK 367

Query: 388 LVRLY--RDGMPIKM-------SKRAGDFITLRHVVDE---------VGSDSVRF--MML 427
             R +  RDG  +K+        +RA   IT R   DE         VG  +V++  + +
Sbjct: 368 SGRPFKTRDGGTVKLIDLLDEAVERAKGAITQREAYDEEELEKIAEIVGIGAVKYSDLSI 427

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R+++ + D+D     E    N   Y QYAYAR RSIFR+            +   +  +
Sbjct: 428 NRESNYIFDWDRMLSLEG---NTSLYQQYAYARIRSIFRK------------YDGTIEGK 472

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               D  E +L + L +   V+  A     P+ +  YLYDLA++F   + +   NP LR 
Sbjct: 473 VQLGDELERRLALKLLQLEDVLRAAAREAMPHYITGYLYDLATLFMKFYEN---NPILR- 528

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
                 +L   RLQL  + A  +   L I+G++
Sbjct: 529 -SDVPEELRQSRLQLAKSTADTLKLALEILGIK 560


>gi|15679444|ref|NP_276561.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334359|sp|O27496|SYR_METTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2622560|gb|AAB85922.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 560

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 155/613 (25%), Positives = 265/613 (43%), Gaps = 121/613 (19%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           K+  K+   I +E P +   G L++  +  L+  L   P+ I   I++ I+  P++    
Sbjct: 19  KLGIKVPPEIKLEEPPNPQLGDLASTVSFELAGKLRRAPIEITADIMSVIET-PEIFETI 77

Query: 83  IAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            +   +IN ++    +  ++L SI     +YG +   +  +V +E  SANP GP+H+GH 
Sbjct: 78  ESKGPYINFFVDYGRFSSRLLESI---QDDYGSH-PPRDERVILEHTSANPNGPLHIGHI 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R A++GD+LA ++  +GY+V  +YY+ND G QI      + W     L N D DL +  Y
Sbjct: 134 RNAIIGDSLARILRMAGYDVETQYYVNDMGRQIAM----IVW----GLLNLDGDLED--Y 183

Query: 202 PGVYLKH-VGK--------------------ELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           PG  + H VGK                    EL  KY +       E+    V +Y +  
Sbjct: 184 PGDKMDHRVGKLYFEVNQRLKENPGIRDEVDELIRKYEA----GENEELFRKVVEYCLSG 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M     + +K L++ HD F+ E  F R     +  +I++L + GY  E            
Sbjct: 240 M----EETMKRLHVHHDRFVWEGQFVRD--GTVDRVIESLRKTGYTGE----------ND 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
              +D ++      +V       L +SDG+  Y   D+AY   K E G D +I V+GSDH
Sbjct: 284 VLYLDLEEFGLEKELV-------LTRSDGTSLYSTRDIAYHLQKSEEG-DVIIDVLGSDH 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
               +++      +  K+ +  V+  E + L        MS R G FI++  ++DE  S 
Sbjct: 336 KLAAEQVGIAVELLGGKRPE--VIFYEFITLPEG----SMSTRRGVFISVDELMDEAHS- 388

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY--------------------------- 453
             R +   +K  +L D     + E      + Y                           
Sbjct: 389 --RALHEVKKRRDLPDDVADDIAESIGNGAIRYYIARLSPEKHIVFRWDDALSFERGCAS 446

Query: 454 VQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           +QYA+AR C+ + + +     D++    P          +  E +L+  LA +P V+E +
Sbjct: 447 IQYAHARACKLLEKASFTGEEDIEDGWKP----------EGDERELVRLLARFPVVVEES 496

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
            +A+  + +A Y  DLA+ F+  +   R  P +             RL+LV +V   + +
Sbjct: 497 ALARRVHPVAQYAQDLANTFNSFY---RSTPVI------GSDFEGARLRLVDSVRKTLRN 547

Query: 573 GLNIIGVESPNEM 585
            LN++G+ +P  M
Sbjct: 548 ALNLLGIHAPETM 560


>gi|21227450|ref|NP_633372.1| arginyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|23822188|sp|Q8PX74|SYR_METMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|20905820|gb|AAM31044.1| Arginyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 569

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 266/587 (45%), Gaps = 96/587 (16%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98
           H  L++ AA  L+     +P  +A  IV+ ++I P+   +  V  AG  +IN +    YL
Sbjct: 36  HADLASRAAFRLAGIHRQNPKDLASRIVSAVEI-PEGSFIGKVSAAGP-YINFFAGKHYL 93

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +++++    ++G        ++ +E  SANP GP+HVGH R +++GDTLA ++  +G
Sbjct: 94  NGTVNAVLKEKEKFGCG--APKDRILLEHTSANPNGPLHVGHIRNSIIGDTLARILRRAG 151

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALY-NNDSDLPEGYYPGVYLK-HVGKELADK 216
           Y+V  +YY+ND G QI  ++ +   R++  L   +DS + +     VY+K +V  +    
Sbjct: 152 YDVEVQYYVNDMGRQIAVVSWAC-ERFELDLSRKSDSAIAD-----VYIKANVELDKNPG 205

Query: 217 YSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           Y  E+    E+     V+     D +V   +  I++ L  LN+ HD F+SE  F +    
Sbjct: 206 YIKEIDALMEKVEAGDVRTIEHFDKAVSLAVAGIKETLLRLNVAHDKFVSESTFLKS--G 263

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + DI++ +                K T +   D+  L+   +  G +    + +S+G+ 
Sbjct: 264 AVHDIVERI----------------KATGRTKTDKGALVVDLSDYGFEKTLVIQRSNGTS 307

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y   DLAY + K  +  D +I V G+DH     +L A   A+  K+ +  V++ E V L
Sbjct: 308 LYTTRDLAYHEWKAGQA-DRIIDVFGADHKLISGQLRATLNAIGVKEPE--VVIFEFVSL 364

Query: 392 YRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDSVRF 424
                   MS R G FI+                            + V + VG  +VR+
Sbjct: 365 PEGS----MSTRRGQFISADDLFDRVTGAAFEQVETRRPETSYEFKKQVAEAVGLGAVRY 420

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFP 481
            ++     +   F++ +  +  K+    Y+QY++AR  SI  +AK+     PD + D  P
Sbjct: 421 DIVRVSPEKSTVFNWKEALDFEKQGAP-YIQYSHARACSILEKAKEEAAWNPDKEID--P 477

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ++      + SE+ LI  +A +  VI+      +P+ LA Y  +LA  F         
Sbjct: 478 SLLV------EDSEIDLIKKMAMFDSVIDLGARELKPHVLAIYARELADAF--------- 522

Query: 542 NPRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N   RFV    A +  +   RL LV     ++ + L+ +G+ +P  M
Sbjct: 523 NQFYRFVPVIAAEDENVRAARLALVDCARVVLANSLDTLGIIAPESM 569


>gi|116753536|ref|YP_842654.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694355|sp|A0B5P0|SYR_METTP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116664987|gb|ABK14014.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 558

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 273/626 (43%), Gaps = 111/626 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCA-----HGHLSTNAAMILSRPL 57
           +F DF S ++  LKE           LDR  +  P + +     H  LST  A  LS  L
Sbjct: 1   MFLDFMSEVEGILKEG----------LDRCGLSVPLENSLDLSPHADLSTTIAFRLSPVL 50

Query: 58  GLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
             DP  +A  I   +   P   VD   + G  +IN Y+S ++L  +++        +GR 
Sbjct: 51  RKDPKDVAAEIYNSMG-SPSRWVDRAELVGP-YINFYMSRNFLDNVVTKAQGEDAWWGR- 107

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +   V +E  SANP GP+HVGH R +V+GDT+  ++  +GY V  +YY+ND G Q  
Sbjct: 108 ---RSGSVVVEHTSANPDGPLHVGHIRNSVIGDTIVRILRRAGYNVEAQYYVNDMGRQTA 164

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWL 230
                V W       + D   P+     VY+      +   EL+ +   EL+   E +  
Sbjct: 165 M----VVWGCDH--LDLDDSKPDHAIARVYIAAHKIMNEKPELSAEV-DELMRRYESRDP 217

Query: 231 PIVKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG--YV 286
            IVK +   A   I  I   L  +NI HD +  E +F       + +I++ L R G   +
Sbjct: 218 EIVKKFQRAARYAISGIERTLHRMNIHHDSYKWESEFVWD--GSVDEILEMLERTGRTVL 275

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            +G L            +D  +  F  ++V       L ++DG+  Y   DLAY K K E
Sbjct: 276 KDGAL-----------QLDLSEEGFEKSLV-------LRRADGTTLYTTRDLAYHKWKAE 317

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             ++ ++ V+G+DH     +L      +     +  V++ E V L  DG    MS R G 
Sbjct: 318 -NYERVVEVLGADHKLISAQLRTALRMLG--IGEPEVVIFEFVSL-PDG---SMSTRRGK 370

Query: 407 FITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDF 439
           FI+   ++DE                           V   +VR+ ++     +   FD+
Sbjct: 371 FISADELLDEVEKQAYLEVTKRRPEMDEEFRRDVAGKVAVGAVRYDIVRVSADKATTFDW 430

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
               +  K +  F +QY++AR  SI  +A ++      D F   ++      D  E+ LI
Sbjct: 431 KTALDFEKLSAPF-IQYSHARACSIINKAGEL------DEFDPGLLR-----DDYEIALI 478

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             +AE+  VIE A    +P++LA Y  +LA  F+  +   R +P L    A   +L   R
Sbjct: 479 KKIAEFDLVIERAARELKPHQLATYARELAERFNLFY---RYDPVL---DAKPVELRNAR 532

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV A  + +++ L+ +G+++P  M
Sbjct: 533 LGLVRASRNALSATLDTLGIDAPESM 558


>gi|298673986|ref|YP_003725736.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298286974|gb|ADI72940.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 563

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 257/581 (44%), Gaps = 86/581 (14%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELI--VARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99
           H  +++N A  L+     +P  IAE I   A I     +  + + G  ++N +    YL 
Sbjct: 32  HSDVASNVAFRLASKYRQNPKDIAEKIGNTAVIGDKSYIGKMEVTGP-YLNFWAKRDYLD 90

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             +  I      +  N       + +E  SANP GP+HVGH R +V+GDTL+ ++  +GY
Sbjct: 91  DTVLKIRKEKENFASNF--SSGDIILEHTSANPNGPLHVGHIRNSVIGDTLSRVLKHAGY 148

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  +YY+ND G QI  ++    W  +   + ++S   +     +Y+K   +EL    S 
Sbjct: 149 NVRTQYYVNDIGRQIAIVS----WGLKNFGF-DESKKSDHAIADLYIKS-NQELEKDTSK 202

Query: 220 --------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                   +++   +E  + I  D SV+  ++  +  LK LN+ HD F+ E +F R    
Sbjct: 203 VQDIDSLMQMVENGDEDTIKIF-DESVRYSLEGTKQTLKTLNVSHDEFVYESEFIRN--G 259

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  I++ L                K+T   +MD   L+   +  G +    + +SDG+ 
Sbjct: 260 SVSKIVNEL----------------KSTGHTEMDNGALVVDLSGYGFEKQLVIQRSDGTS 303

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y   DLAY + K     D +I ++G+DH     +L+A    + +K+ +  V++ E V L
Sbjct: 304 LYTTRDLAYHEQKSAES-DRVIDILGADHKLVSSQLKATMNLLDKKEPE--VVIFEFVSL 360

Query: 392 YRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDSVRF 424
                   MS R G FIT                            + + D+VG  +VR+
Sbjct: 361 PEGS----MSTRKGKFITADDVFDKVKSQAYKEVDKRRPDMPADFKKEISDQVGMGAVRY 416

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++     +   FD+ K  +  K+    Y+QY++AR  +I ++A+  +        P + 
Sbjct: 417 DIISVSPEKSTVFDWKKALDFEKQGGP-YIQYSHARACNILKKAETFWN-------PEDA 468

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +      +  E+ LI  +A++ ++I+ +    +P+ +A Y  +LA  F+  + +   N  
Sbjct: 469 VNPSVLVEDDEVALIKKMAKFDQMIDQSAKELKPHTVATYARELADDFNQFYRYVPVNS- 527

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                A + ++   RL LV     ++ + L I+G+ +P  M
Sbjct: 528 -----AEDDEVRNARLGLVDCARIMLANTLYILGISAPESM 563


>gi|148643291|ref|YP_001273804.1| arginyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|166232806|sp|A5UMK8|SYR_METS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148552308|gb|ABQ87436.1| arginyl-tRNA synthetase, ArgS [Methanobrevibacter smithii ATCC
           35061]
          Length = 575

 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 266/598 (44%), Gaps = 107/598 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P +   G L++  A  L++ L   P  IA  IV +++I P++     A   ++N ++
Sbjct: 39  LEFPPNPDMGDLASTIAFSLAKKLRKAPNLIASEIVEKLEI-PEIFEKVEAIGPYVNFFI 97

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S   K L   V  G +YG +L     K+ +E  SANP GP+H+GH R ++ GD+L  L
Sbjct: 98  DYSNFSKKLLEYV--GKDYG-HLPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRL 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGK 211
           +  +G EV  +YY+ND G QI   A+ VF   +  L   + + D  +     +Y K   K
Sbjct: 155 LKVAGREVETQYYVNDMGRQI---AIIVFGITELGLKIEDQEGDKIDHKIGRLYFKANQK 211

Query: 212 ELADK-YSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
              D+   S + N  E      E  L  + +  V++ +  I++ L  +NI HD F+ E  
Sbjct: 212 LNEDESLVSHVDNLIERYEGGAEPELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQ 271

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           F R     + D+I     +G+V  G +    +     C    K+ + R            
Sbjct: 272 FVRS--GEVDDMIKYFDHEGFVSYGDV----TYIDLTCFQIEKEFVLR------------ 313

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +SDG+  Y   DLAY + K  +G D ++ ++GSDH     +L A          QINV+
Sbjct: 314 -RSDGTSLYSTRDLAYHRYKATQG-DVVLDILGSDH-----KLAA---------QQINVI 357

Query: 385 LCELVR------LYRDGMPI---KMSKRAGDFITLRHVVDE------------------- 416
             E++R      ++ + + +    MS R G F+++  +VDE                   
Sbjct: 358 FKEILREIPPEVIFYEFITLPSGSMSTRKGVFVSVDELVDEAVKRAADEIKSRNPDLTDE 417

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQ 467
                   +G  ++RF +      + L F + +    S E     +QYA+AR C+ + + 
Sbjct: 418 EIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDEA--LSFERGCASIQYAHARACKLLKKS 475

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            KD+      D    + +P E+E D     LI  +A++P+VIE+    +  + +  Y  D
Sbjct: 476 GKDVSSLAVSD----DWVPNENEKD-----LIRTIAKFPQVIEDCANKKRIHNITQYCQD 526

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  F+  +         +  Q     +   RL LV    + + + L+I+GV +P +M
Sbjct: 527 LAGAFNKFY---------KAEQVIGSDVEDTRLVLVDRAKTTLKNALDILGVPAPQKM 575


>gi|212223653|ref|YP_002306889.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008610|gb|ACJ15992.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 642

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 168/633 (26%), Positives = 269/633 (42%), Gaps = 124/633 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLS-PSYLRK 100
           G  +T  +  L+R     P  IAE IV RIK   P   S   A  G+IN YL+  ++ + 
Sbjct: 44  GDFATTVSFQLARVFRKAPKLIAEEIVERIKDKLPGEVSDVKAVNGYINFYLNYEAFGKD 103

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           ++S I+  G  YG +  GKG KV +E  S NPT P+H+GH R AV+GDT+A +M   GY 
Sbjct: 104 LVSEILKRGEHYGESEFGKGRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRALGYN 163

Query: 161 VTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHV-------- 209
           V  + YI+D G Q       V W Y   ++     +++L E       + HV        
Sbjct: 164 VEVQNYIDDLGVQF----AQVLWGYLNLKEEFERLEAELREKGVKEDVIDHVMGLLYVEV 219

Query: 210 -----GKELADKYSSELLNFPEEKWLPIVK------DYSVQA-MMKIIRDDLKALNIQHD 257
                G    DK   EL+   EE    I +      +  V+A MM   R     +NI +D
Sbjct: 220 NKRIEGNPEVDKEVRELMKKLEEGDNEIAEIGRKLAERVVKAQMMTTYR-----MNITYD 274

Query: 258 IFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +   E D  R G       +I++     +  EG       K      MD ++L       
Sbjct: 275 LLSWESDIMRSGIFEEAYGLIESNPNFFWAEEG-------KYKGAFVMDLRKLF------ 321

Query: 317 GDDVDRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVM---------------GS 358
             D+  P L   +SDG+ TY   D+AY   K+ +   +M+Y                 G 
Sbjct: 322 -PDMKNPFLVLKRSDGTATYTGKDIAYHLWKFGKVSSDMLYKPWDRLEDHETWTTAPDGE 380

Query: 359 DHSGYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGM--------------PIKMSK 402
           + SG   + + V   +   +K  Q+ +     +  + D                  K S 
Sbjct: 381 EMSGKFGKADIVINVIGAEQKHPQMAIKYALQLLGFEDSAQNFHHLAYEHVVRPEGKFSG 440

Query: 403 RAGDFI--TLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433
           R G ++  T+  V++E                           VG  +VRF ++     +
Sbjct: 441 RKGTWVGFTVDEVLNEAVRRAKELVEEKNPNLSEEEKEKIAEAVGVGAVRFNLVKYSPDK 500

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFD 492
           ++ F +  V     E+   YVQYA+ARC SI R+A++    +++ +L  R      S+  
Sbjct: 501 IITFRWEDVLNFEGESAP-YVQYAHARCASILRKAEESGVSVEWEELLKRADF---SKLT 556

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E +LI  LA +P +IE A    +P+ + +Y  ++AS+F+  +    ++P L+      
Sbjct: 557 NREKELIKLLARFPEIIEGAGKDIKPHLIPWYANEVASLFNKFYM---DHPVLKAEDGVR 613

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +    RL LV A   ++ + L ++G+ESP +M
Sbjct: 614 EE----RLLLVLATKQVLRNALALLGIESPEKM 642


>gi|257053080|ref|YP_003130913.1| arginyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691843|gb|ACV12180.1| arginyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 583

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 165/617 (26%), Positives = 266/617 (43%), Gaps = 119/617 (19%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAG 85
           D + IERP +     L+++AA  L+   G  P  IA  I +  +IDP     V SV   G
Sbjct: 25  DDLGIERPPEDVPAVLASSAAYRLADVAGAPPPKIAADIAS--EIDPAEYDYVGSVQTQG 82

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
             ++N   S  Y    L +      +YG  L   G  V +E  SANPTGP+HVG  R  +
Sbjct: 83  P-YVNFLPSDRYFEGTLEA--AQAADYG-TLEDTGDSVVVEHTSANPTGPVHVGRARNPI 138

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG----- 199
           VGD LA ++ ++G +V R YY+NDAG QI     +VF W Y+     ++SDLPE      
Sbjct: 139 VGDALARVLEYAGNDVERHYYVNDAGRQI-----AVFTWAYETF---DESDLPEPERESP 190

Query: 200 ------YYPGV--YLKHVGKELADKYSSEL------LNFPEEKWLPIVKDYSVQAMMKII 245
                 YY     YL+   +   +    E+      L   +E+    V +  V  ++  +
Sbjct: 191 EYEMVRYYRAANDYLEEASESEQEAAEDEIGAILQGLEEGDEETYERVSEV-VDTVLGGM 249

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDM 304
           R+ L  L  + D F+ E  F R       D++D L      V+E        +   + D+
Sbjct: 250 RETLGRLPAEFDEFVKETRFMRD--GSTDDLVDRLKELDAAVFE--------EDAWQLDL 299

Query: 305 D--RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
               K L+F             L+SDG+  Y   DLA+ + K++  FD  + V+G DH  
Sbjct: 300 PDFEKNLVF-------------LRSDGTSLYTTRDLAHHEWKFD-NFDRAVTVLGEDHKL 345

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
              +L +    +     ++  +    V L   G    MS R G  + L  ++DE      
Sbjct: 346 QADQLSSTLDLLGHDTDRLQQVFYSWVNLPEGG----MSTREGTGVDLDDLLDEAIDRAR 401

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKE 448
                                      VG  +VR+ ++ ++ ++ + F++ +  + +++ 
Sbjct: 402 EEVEDRLEDRQRSDDLDGADVERIAHQVGIGAVRYDVVAKQPTKGITFEWDRALDFEAQS 461

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
            P  YVQY +ARC  I  + KD   ++  +      +  E+E D     L+  +A +P V
Sbjct: 462 AP--YVQYVHARCCGIIDEGKDAGYEVP-ETVSAATLTTEAERD-----LLRAIARFPGV 513

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           IE A     P+ +A Y  D+A  F+  +   RE P L    A+          +  A  +
Sbjct: 514 IEQAAEELRPHVVATYTRDIAEAFNTFY---RECPVL---DADPETRAARLALVAAARTT 567

Query: 569 IINSGLNIIGVESPNEM 585
           + N+ L+ +GVE+PN M
Sbjct: 568 VANA-LDALGVEAPNSM 583


>gi|157497158|gb|ABV58323.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria
           immitis]
          Length = 189

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 70/161 (43%), Positives = 102/161 (63%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           ++  ++E P + A+G + TN AM+L+R    + + IAE++    ++  ++  V IAG GF
Sbjct: 25  VENFILEPPSNRAYGDVYTNVAMVLARYERKNSIEIAEILAEEFELFNEIAKVEIAGPGF 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN+        +IL  I     E+G   IG    VN+EFVSANPTGP+H+GH R A+ GD
Sbjct: 85  INMNFKIEVWHRILKQINELKTEFGTLNIGNNQAVNVEFVSANPTGPLHIGHVRGAIFGD 144

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            LA+L+   GY+ T+EYYINDAG QI+ L  SV+ RY++AL
Sbjct: 145 VLANLLKKVGYQTTKEYYINDAGTQIDMLIRSVYLRYKEAL 185


>gi|14520895|ref|NP_126370.1| arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878801|sp|Q9V0V2|SYR_PYRAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5458112|emb|CAB49601.1| argS arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 625

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 154/625 (24%), Positives = 268/625 (42%), Gaps = 120/625 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYL-RK 100
           G   T  A  L+R +   P  IAELIV  +K + P+      A  G++N ++   YL R+
Sbjct: 39  GDFGTPVAFKLARVMKKPPFQIAELIVEELKKELPEGIREVRAINGYVNFFVDYGYLARQ 98

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           ++  ++  G  +G + IG+G KV +E  S NPT P+H+GH R A++GD++A ++ F GYE
Sbjct: 99  LIVEVLEKGDRFGSSDIGRGKKVIVEHTSVNPTKPLHMGHARNAILGDSMARILRFLGYE 158

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY---LKHVGKELADKY 217
           V  + YI+D G Q       V+W Y +     +  + E    G+    + HV   L  + 
Sbjct: 159 VEVQNYIDDLGIQFA----QVYWGYLKLREKFEKIMKELKEKGIKEDPIDHVLGLLYVEV 214

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK---------------IIRDDLKA---LNIQHDIF 259
           +  L   PE        +  ++ +MK               ++R  +     L I++D+ 
Sbjct: 215 NRVLEENPE-------IEAEIRDIMKKLESGELNGRELAESVVRAQMVTTYRLGIKYDLL 267

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           + E D         R + +   +     E    P + K      MD  +L         D
Sbjct: 268 VWESDIVS------RKLFEIAVKLLERNENFYTPNEGKYKGAFVMDLSKLF-------PD 314

Query: 320 VDRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK-RLEAVAAAVS 375
           +  P L   +SDG+ TY   D+AY   K+ +   +++Y    +H+       E+V     
Sbjct: 315 MKNPYLVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKPWDEHTWTTAPDGESVKGKFG 374

Query: 376 EKKAQINVLLCE--------------------------LVRLYRDGMPIKMSKRAGDFI- 408
                INV+  E                          L   + +    K S R G ++ 
Sbjct: 375 GADIVINVIGAEQRHPQMAIKHALKLLGFEDAAENLHHLAYEHVERPEGKFSGRKGTWVG 434

Query: 409 -TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
            T+  V++E                           VG  ++R+ M+     + + F + 
Sbjct: 435 FTVDEVINEAIKRARELIEEKSPGLSDEEKEEIAEKVGVGAIRYNMVKYSPDKKIIFRWE 494

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            V     E+   Y+QYA+ARC SI R+A +  P+ +  L   N      E    E +LI+
Sbjct: 495 DVLNFEGESAP-YIQYAHARCSSILRKAGN--PEWEALLKEANF----KELTERERELII 547

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L+++P V+E A    +P+ +A+Y  +LAS+F+  +    ++P ++      + +   RL
Sbjct: 548 LLSKFPEVVEQAGRDVKPHLIAWYANELASLFNKFYM---DHPVIK----AEKGIREARL 600

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            LV AV  ++ + L ++G+E+P+ M
Sbjct: 601 LLVMAVRQVLRNSLWLLGIEAPDRM 625


>gi|84490352|ref|YP_448584.1| arginyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|109895002|sp|Q2NE12|SYR_METST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|84373671|gb|ABC57941.1| ArgS [Methanosphaera stadtmanae DSM 3091]
          Length = 560

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 287/626 (45%), Gaps = 109/626 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +++   + +   +KE   K+++  K  D I++E P + + G +STN A  L+  L   P+
Sbjct: 1   MYSKLKTEINESIKEALTKLRI--KYDDEIILEEPPNPSMGDMSTNIAFSLASKLKKSPV 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE--YGRNLIGKG 120
            IA+ I   IK+    + V   G  +IN Y++ +    + ++ VV+ I+  YG  L  K 
Sbjct: 59  EIAQEIKENIKLPLYFEKVETKGP-YINFYINYT----LFTTKVVNYIDKNYGE-LPEKD 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +E  SANP GP+HVGH R A++GD+L  ++  +GY+V  +YY+ND G QI      
Sbjct: 113 ERILLEHTSANPNGPLHVGHLRNAILGDSLKRILQHAGYKVEAQYYVNDMGRQIAI---- 168

Query: 181 VFWRYQQALYNNDSDLPEGYYPG-VYLK-HVGKELADKYSSE----LLNFPEEKWLPIVK 234
           + W   +  Y  D D    +  G VY K +   E   +Y+ E    L  + E     ++ 
Sbjct: 169 IVWGMDKFNYTVDDDKKADHAIGEVYYKCNQQLEANPEYNQEIDDILRKYEEGTDAALID 228

Query: 235 DYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +   V+  +  I++ LK LNI+ ++F  E  F R     + D+++ L +   + + IL 
Sbjct: 229 AFQGVVEYCIDGIKETLKDLNIKMNLFKWESTFLRN--GSVDDVLEKL-QPFTIQKDILY 285

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P     ++ ++D K+L+ R             +S+G+  Y   DLAY + K  +  D  
Sbjct: 286 LP----LERYNVD-KELVLR-------------RSNGTSLYATRDLAYHQYK-TKNSDIS 326

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + ++G+DH    K+L  +A  +S  +A   V+  E + L        MS R G FI+   
Sbjct: 327 LDILGADHKLAAKQL-GLALELSNNRAP-EVVFYEFIDLPEGS----MSTRKGVFIS--- 377

Query: 413 VVDEVGSDSVRFMM--LWRKNSELLDFDFCKVKEQSK----------------ENPVFY- 453
            VDE    SV      L R++   LD    +++E SK                E P+ + 
Sbjct: 378 -VDEFIEQSVEHAKEELIRRD---LDLTEKQIEEVSKIVGVGSIRFYINQISPEKPITFK 433

Query: 454 -------------VQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
                        +QYA+AR C+ + +   + F ++  D           E D  E  LI
Sbjct: 434 WEEALSFERGCASIQYAHARACKLLAKSDYNEFEEVRCDY----------ELDDEEKDLI 483

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L+++  VI  +   +  + LA Y   L+  F+  +         + + + + KL   R
Sbjct: 484 KTLSQFTEVICQSAQERRVHHLAQYTLSLSKAFNKFYKSK------QVIGSEHEKL---R 534

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+LV A    + + L ++G++SP  M
Sbjct: 535 LKLVDASRITLKNSLKLLGIKSPEFM 560


>gi|304313810|ref|YP_003848957.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587269|gb|ADL57644.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 560

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 270/603 (44%), Gaps = 101/603 (16%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           K++  +   I +E P +   G L+   A  L+  L   P+ I   I++ I+  P++    
Sbjct: 19  KLQLPVPSEIKLEEPPNPQLGDLACTVAFELAGELKRPPMEITSDIMSVIET-PEIFEAV 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            +   +IN ++    L   L  I+    +YG +   +G ++ +E  SANP GP+H+GH R
Sbjct: 78  ESKGPYINFFVDYGKLSGKLLEIIDD--DYGSH-PERGERIILEHTSANPNGPLHIGHIR 134

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A++GD+LA ++  +GY+V  +YY+ND G QI      + W     L N   +L +  YP
Sbjct: 135 NAIIGDSLARILRKAGYQVETQYYVNDMGRQIAM----IVW----GLLNLQKNLDD--YP 184

Query: 203 GVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYS-----------VQAMMKIIRDDL 249
           G    H    L  + + +L   P  +E+   +++ Y            V+  +  +++ +
Sbjct: 185 GDKRDHRVGRLYLEVNQKLKEDPGIKEEVDELLRQYEAGENEDTFREVVEYCLDGMKETM 244

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           + L++ HD F+ E +  R     + ++I++L + G           ++  +   +D +  
Sbjct: 245 QRLHVHHDRFVWEGELVRD--GTVGEVIESLRKTGL----------TRENEVLYLDLEDF 292

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                +V       L +SDG+  Y   D+AY   K   G D +I V+GSDH    +++  
Sbjct: 293 GIEKELV-------LTRSDGTSLYSTRDIAYHLQKSREG-DILIDVLGSDHKLAAEQVGI 344

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
               +  KK +  V+  E + L        MS R G FI++  ++DE             
Sbjct: 345 AVDLLGGKKPE--VIFYEFITLPEG----SMSTRRGVFISVDELMDEAHKRALEEVEKRR 398

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CR 462
                        +G+ ++R+ +      + + F + +    S E     +QYA+AR C+
Sbjct: 399 ELPDDVADEIAEAIGNGAIRYYIARLSPEKHIVFRWDEA--LSFERGCASIQYAHARACK 456

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            + + + +   D++    P N           E +L+  LA +P V+E A +A+  + +A
Sbjct: 457 LLKKASFNGDEDIEDTWKPEN----------DEKELVRLLARFPVVVEEAAMARRVHPVA 506

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+ DLA+ F+  +   R  P +        +    RL+LV +V  +I + L ++G+ +P
Sbjct: 507 QYVQDLANAFNSFY---RSTPVI------GSEFEGARLRLVDSVRIVIRNALGLLGIHAP 557

Query: 583 NEM 585
             M
Sbjct: 558 ETM 560


>gi|323144078|ref|ZP_08078721.1| arginine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416154|gb|EFY06845.1| arginine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 578

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 274/625 (43%), Gaps = 105/625 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           LKN +  +    ++ + +++ I +ER +D AHG  +TN A+IL++PL ++P  +AEL++ 
Sbjct: 9   LKNAVLVLAKDHEIPENVINNIKVERAKDKAHGDFATNLALILAKPLKMNPRAVAELLIK 68

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            ++    ++   IAG GFIN ++S S+  + L  +  S +  G         V +++ + 
Sbjct: 69  NLEPSARIEKTEIAGPGFINFFVSDSFTAEKLQEM-RSDVRLGIKEADVKDIVVVDYSAP 127

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N    M V H R  V+GD +  ++ F G++V R  ++ D G Q   L    +   Q+  Y
Sbjct: 128 NVAKEMAVHHIRSTVIGDAVVRVLEFLGHKVIRANHVGDWGTQFGMLI--AYLEEQENKY 185

Query: 191 NNDSDLP--EGYYPGVYLKHVGKE----LADKYSSELLNFPE---EKWLPIVKDYSVQAM 241
             D DL   E +Y     ++   E    LA  Y  +L +  E   + W         Q +
Sbjct: 186 GTDLDLSDFEAFYRAAKERYDSDEDFAVLARSYVVKLQSGDEYCKKMW---------QKL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEG------IL 291
           +K+  D  + L  + D+ ++E D        D  P   I+++L ++G   E        L
Sbjct: 237 VKMTMDQNQKLYDRLDVTLTEKDVMGESLYNDMLP--KIVEDLMQKGIAVEDQGAVVVFL 294

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
           P  K+K                   G+ +   + K DG Y Y   D+A  K + E    N
Sbjct: 295 PQFKNKD------------------GEPLGEIVRKKDGGYLYTTTDIACVKYRVETLKAN 336

Query: 352 -MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            ++Y + S    +++   ++A  A  +++  +I      ++ L +DG P K   R+G  +
Sbjct: 337 RLMYFIDSRQHQHLEAAWSIARMAGYADESVRIEHEAFGMM-LGKDGKPYKT--RSGGTV 393

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFD-----------FCKVKEQSKE--------- 448
            LR ++DE  +++    +L ++NS L   D             K  + SK          
Sbjct: 394 KLRDLLDE--AENRVTALLDKRNSPLQGKDRDEVIHNIAIGAVKYADLSKNRMTDYVFDW 451

Query: 449 --------NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
                   N   Y+QYAY+R RSIFR+A         ++ P  ++ QE     +E  L  
Sbjct: 452 DLMLSFDGNTAPYLQYAYSRIRSIFRKA---------EIEPGAIVLQEE----AENDLAT 498

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +   +++      P+ L  YL++L+ +F   +      P L+   A   K +  RL
Sbjct: 499 KLLAFEDTVKSVAEKAMPHLLCTYLFELSGIFMRFYEAC---PVLKGDVALEIKAS--RL 553

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L    A ++  GL ++G+ +  +M
Sbjct: 554 ALCDLTAKVLKQGLGLLGINTMEQM 578


>gi|325957848|ref|YP_004289314.1| arginyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329280|gb|ADZ08342.1| Arginyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 561

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 150/597 (25%), Positives = 261/597 (43%), Gaps = 96/597 (16%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +I D I +E P +   G ++++ +  L++ L   P+ I + I+  +KI PD+ S   +  
Sbjct: 23  EIPDEIKVEEPPNPELGDVASSVSFQLAKELKRSPMEITQEILKALKI-PDIFSKVESKG 81

Query: 87  GFINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
            +IN Y + +      SS+V++ I  +YG+ L    TK+ +E  SANP GP+H+GH R +
Sbjct: 82  PYINFYANYNEF----SSLVLNSITEDYGK-LESNNTKIILEHTSANPNGPLHIGHIRNS 136

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPG 203
           ++GD+LA ++  +GYEV  +YY+ND G QI      + W      YN D    P+     
Sbjct: 137 IIGDSLARVLKSAGYEVETQYYVNDMGRQIAM----IVWGLLNLDYNMDPFGKPDHEIGK 192

Query: 204 VYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           +Y           E+ D+ S+ L  +   ++  L  + +  V+  ++ I    K LN+ H
Sbjct: 193 LYFNVNEKLRANPEIKDEVSALLKRYERGDDPELEKMFEGVVKNCLEGISTTSKRLNVNH 252

Query: 257 DIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           D FI E  F   G  + I   +D   ++  V                 MD         +
Sbjct: 253 DAFIWESRFIKNGSVANILKSLDEYIQKNEV---------------VYMDLNSYGIEKEL 297

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           +       L++SDG+  Y   DLAY K K E G D  I ++GSDH   + +L+     + 
Sbjct: 298 I-------LIRSDGTSLYATRDLAYHKEKSE-GSDRYIDILGSDHKLAIDQLKVPLELLG 349

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K  +   +  E + L        MS R G FI++  +++E  S ++  + + ++ ++L 
Sbjct: 350 AKAPE--TIFYEFITLPEGS----MSTRRGVFISVDELMNEAVSRAM--IEIEKRRTDLG 401

Query: 436 DFDFCKVKE-------------QSKENPVFY--------------VQYAYARCRSIFRQA 468
           + +  K+ E              S E  + +              +QYA+AR   +   A
Sbjct: 402 ESERLKIAEIVGIGAIRYYIARLSPEKHIVFKWDEALSFERGCASIQYAHARACKLLENA 461

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L  D F  +        D  E++L+  ++++   IE +      + +A Y  DL
Sbjct: 462 NYDRNSLKIDNFDLD--------DKIEIELVKLMSKFSAAIEESARINRVHNIAQYSLDL 513

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+  +        L  + +    L   RL +V      I + L +IG+E+P  M
Sbjct: 514 AGGFNKFYKA------LPVIDSEKEDL---RLLIVDKFRITIRNSLELIGIEAPESM 561


>gi|124486323|ref|YP_001030939.1| arginyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166232802|sp|A2STL6|SYR_METLZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|124363864|gb|ABN07672.1| arginyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 558

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 250/576 (43%), Gaps = 79/576 (13%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRK 100
           H  L++  +  L++    +P  IA  +VA +   P+   + I+ KG +IN      Y   
Sbjct: 30  HADLASTVSFALAKTQRKNPAVIAGELVAVLSAKPEAKGIEISAKGPYINFIFGGDY--- 86

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  S+  +  E    L  +  KV IE  SANP GP+HVGH R  V+GDTL      +GY 
Sbjct: 87  VAESVHAARREDYGTLPARTDKVIIEHTSANPNGPLHVGHIRNTVIGDTLVRAFRKAGYP 146

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYN------NDSDLPEGYYPGVYLKHVGKELA 214
           V  +YY+ND G QI  +A    W  Q   Y+       D  +   Y     +     E+ 
Sbjct: 147 VEAQYYLNDMGRQIAIVA----WGVQNLHYDRIPGEKGDEYIVRHYVEANKIAKAKPEIE 202

Query: 215 DKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            ++    E +   + + + +  D SV      I++ L ++N+ HD F+ E  F       
Sbjct: 203 PEFDLLMEKIEAGDPETVKLFHD-SVDICADGIKETLSSMNVVHDKFVRETTFLWN--GS 259

Query: 273 IRDIIDNLARQGYV-YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           ++D+++ + +   V +EG          Q   +D     F +  V       L +S+G+ 
Sbjct: 260 MQDVLNRIEKLPIVHHEG----------QMMYLDLSDEGFGNRYV-------LRRSNGTS 302

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN----VLLCE 387
            Y A DLA+   K  +  D  I V+G+DH     +L+     + E+  +I     V L E
Sbjct: 303 VYAARDLAFHLWKNAQ-CDRSIDVLGADHKLIGAQLQTTLKLIGERPPEIVHFEFVSLPE 361

Query: 388 LVRLYRDGMPI-------KMSKRAGDFITLRH----------VVDEVGSDSVRFMMLWRK 430
                R G+ I       +  KRA + +T+R           +   V   +VR+ ++   
Sbjct: 362 GSMTTRGGVFITADELIAETKKRAMEEVTVRRPELGEDEREKIAKAVAVGAVRYDIVKVS 421

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             +   FD+ +  +  +++   Y+QYA+AR  SI  +AK                 +  E
Sbjct: 422 AEKSTVFDWKEALDFERQSAP-YIQYAHARACSIMEKAK-----------AEGGFAECYE 469

Query: 491 F-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           + D  EL L  H+A +P V+E       P+ LA Y+ DLA +F+  +   R  P L+  +
Sbjct: 470 YSDPYELALAKHIARFPYVLEKVVCELRPHLLATYVRDLADLFNSFY---RFAPVLK-AE 525

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N R     RL LV A  + +   L ++G+E+   M
Sbjct: 526 GNVRD---ARLTLVDACRNTLYQALGVLGIEALESM 558


>gi|300709761|ref|YP_003735575.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123444|gb|ADJ13783.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 582

 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 150/612 (24%), Positives = 260/612 (42%), Gaps = 118/612 (19%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG----FI 89
           +E P +     L+++ A  L+  +G  P  +A  +     +       ++ G G    ++
Sbjct: 29  LEEPPEDVEAVLASSVAFRLAGEVGTSPHEVAGDLADATDV---AGCEYLGGVGTQGPYV 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N + S +Y    L +      +YGR L   G +V +E  SANPTGP+HVG  R  ++GD 
Sbjct: 86  NFHASDAYYADTLET--AREADYGR-LEPTGREVVVEHTSANPTGPVHVGRARNPIIGDA 142

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNN--DSDLPEGYYPGVYL 206
           +A L+ F+G  V R YY+NDAG Q     ++VF W Y+    ++  D D  +  Y  V  
Sbjct: 143 IARLLDFAGNNVDRHYYVNDAGRQ-----MAVFTWAYETFEEDDLPDPDREKADYELVRY 197

Query: 207 KHVGKELADKYSSE---------------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              G    ++                   L N  EE +  +   + V  ++  +R+ L  
Sbjct: 198 YRKGNAFLEEADEGEVEAAEAEIQSIMQGLENGDEEAYERV--GHVVDTVLGGMRESLSR 255

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMD--RKQ 308
           L  + D F+ E  F R     + +++  L      VYE        +   + D+    K 
Sbjct: 256 LPAEFDAFVKETRFIR--DGSVEELVKRLRELDEAVYE--------EEAWQLDLPDFEKN 305

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L+F             L+SDG+  Y   DLA+ + K++  +D+ + V+G DH     +L 
Sbjct: 306 LVF-------------LRSDGTSLYTTRDLAHHEWKFDE-YDHAVTVLGEDHKLQATQLG 351

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
           A    +     +++ +    V L       KMS RAG  + L  ++DE            
Sbjct: 352 AALDLLGNDTDRLDSVFYSYVNLPEG----KMSTRAGTGVDLDDLLDEAVARARDEVETR 407

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454
                                VG  +VR+ ++ ++ S+ + F++ +    +++  P  YV
Sbjct: 408 MDDRIRDDDLTESDIERIARQVGIGAVRYDIVSKQPSKAITFEWDRALNFEAQSAP--YV 465

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENAT 513
           QY +AR   I  +A     D      P  + P  +  D+  E  L+  +  +P VIE+A 
Sbjct: 466 QYVHARTCGILTEAARAGHD------PGRIDP--ALLDSPEERDLLEVIGRFPAVIESAA 517

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             ++P+++A Y  + A  F+  +       R R V + +  LT  RL LV      I + 
Sbjct: 518 TDRQPHQVATYTREFAETFNAFY-------RERQVISADEDLTEARLALVAGARHTIANA 570

Query: 574 LNIIGVESPNEM 585
           L+++G+E+P  M
Sbjct: 571 LSVLGIEAPESM 582


>gi|297619524|ref|YP_003707629.1| arginyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378501|gb|ADI36656.1| arginyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 590

 Score =  136 bits (343), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 275/614 (44%), Gaps = 108/614 (17%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI----AGK 86
            I ++ P     G  STN    L++PL   P  IAE IV+++  + D+ ++ I    A  
Sbjct: 26  EIRLDEPPSINMGDYSTNICFRLAKPLRKAPKMIAEDIVSQLIEENDLKALKIEKIEALN 85

Query: 87  GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           G+IN ++    + +++LS+I      +G+ L  K  KV +E  SANP GP H+GH R  V
Sbjct: 86  GYINFFVDYNEFSKEVLSNIADEKESFGK-LETKNEKVILEHTSANPNGPFHIGHGRNMV 144

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYP 202
           +GD+L  ++  +GY+V  +YY+ND G Q    A+ V+   +  L  N   D  + E Y  
Sbjct: 145 IGDSLKRILINAGYDVETQYYVNDMGRQ---EAIVVYGLDKFNLNENKKQDHGIGEVYVE 201

Query: 203 GVYL----KHVGKELAD---KYSSELLNFPEE-KWLPIVKDY--SVQAMMKIIRDDLKAL 252
              L    + + +E+ D    Y S+   F +E K   I+  +  +V   +   +  L  L
Sbjct: 202 TNKLLNENEDLNQEILDLMRNYESDCEIFEKEGKESEIMGKFEKAVNYTLDGFKQTLGNL 261

Query: 253 NIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           NI HD F+ E  F   GD   ++ +I  L   G V                    K  ++
Sbjct: 262 NIYHDKFVWESSFVKNGD---VKSLIARLKETGKVV-------------------KDEVY 299

Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           R  +    +++ ++  + +G+  Y   D+AY   K E   D  + ++G+DH      +  
Sbjct: 300 RLDLSDYGIEKKMVLARLNGTSLYSTRDIAYHIAKME-NCDKAVNLLGADHKLTAIMVNK 358

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
               +   +A I  +  E + L        MS R G FI++  +++E             
Sbjct: 359 TLDLLGYNEADI--VFYEFISLPEGS----MSTRRGTFISMDELLEEAKVRAKSEIIKRN 412

Query: 417 VGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY---------------VQYAYAR 460
           V +D      +  K +   + ++  ++   S E P+ +               +QYA+AR
Sbjct: 413 VATDEAEIEEIANKIAVGAVRYNIVRI---SPEKPMIFRWDEALDFEKVGCPVIQYAHAR 469

Query: 461 CRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIEN 511
           C  I          D+  ++D      N+   ESEF    + SE  L+  +++ P +IE 
Sbjct: 470 CCRILENVSNSDNLDVLTNMD------NINNLESEFNYEMNDSEKVLVRMISKLPEIIEK 523

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +   ++P  LA Y+ D+A  F+  + +    P L+  ++ N K +  R+++V+A   +I 
Sbjct: 524 SAEVRKPQILANYVLDVAQSFNKFYGNC---PILK--ESENIKNS--RIKIVNATKIVIE 576

Query: 572 SGLNIIGVESPNEM 585
           + L ++G+E P +M
Sbjct: 577 NSLELLGIEVPGKM 590


>gi|20088942|ref|NP_615017.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|23822191|sp|Q8TUM3|SYR_METAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19913789|gb|AAM03497.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 567

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 261/586 (44%), Gaps = 90/586 (15%)

Query: 40  CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPS 96
            +H  L++  A  L+     +P  +A  IV+ I+I P+   +  V  AG  +IN      
Sbjct: 32  SSHADLASRVAFRLASIHKQNPKELASRIVSAIEI-PEGSYIGEVSAAGP-YINFLAGRH 89

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y+ + ++++     ++G        ++ +E  SANP GP+HVGH R +++GDTLA ++  
Sbjct: 90  YMDETVTAVREEKEKFGCG--APKDRILLEHTSANPNGPLHVGHIRNSIIGDTLARILRR 147

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD- 215
           +GY+V  +YY+ND G QI  ++ +   R++  L    S   +     VY+K    EL   
Sbjct: 148 AGYDVEVQYYVNDMGRQIAVVSWAC-ERFELDL----SRKSDAAIADVYIK-ANVELDKN 201

Query: 216 ----KYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
               K    L+   E   L  ++  D +V   +  I++ L  LN+ HD F++E  F +  
Sbjct: 202 PDYVKKIDALMEKVEVGDLQTIERFDKAVSLAIAGIKETLLRLNVVHDKFVNESRFLKS- 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + DI++ +                K T + + D+  L+   +  G +    + +S+G
Sbjct: 261 -GEVHDIVERI----------------KATGRTETDKGALVVDLSDYGFEKTLVIQRSNG 303

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y   DLAY + K  +  D +I V G+DH     +L A   A+  K+ +  V++ E V
Sbjct: 304 TSLYTTRDLAYHEWKAGQA-DRIIDVFGADHKLISGQLRATLNAIGIKEPE--VVIFEFV 360

Query: 390 RLYRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDSV 422
            L        MS R G FI+                            + V + VG  +V
Sbjct: 361 SLPEGS----MSTRRGQFISADDLFDRVTEAAFEQVESRRPETSTEFKKQVAEMVGIGAV 416

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++     +   F++ +  +  K+    Y+QY++AR  SI  +AKD   +  +D  P 
Sbjct: 417 RYDIVRVSPEKSTVFNWKEALDFEKQGAP-YIQYSHARACSILEKAKD---EAAWD--PA 470

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             I      + SE+ LI  +A +  +I+      +P+ LA Y  +LA  F         N
Sbjct: 471 EEITPSLLVEDSEIDLIKKMAMFDSIIDLGARELKPHVLAIYARELADSF---------N 521

Query: 543 PRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RFV    A + K+   RL LV     ++ + L+ +G+ +P  M
Sbjct: 522 QFYRFVPVIAAEDEKVRASRLALVDCARIVLANSLDTLGIGAPESM 567


>gi|288561373|ref|YP_003424859.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
 gi|288544083|gb|ADC47967.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
          Length = 573

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 147/624 (23%), Positives = 278/624 (44%), Gaps = 112/624 (17%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  + + DC+   E      I +E P +   G L++  +  L++ L   P  IA  +V 
Sbjct: 13  LRKAVDQFDCEFDEE------IKLEFPPNPELGDLASTISFQLAKLLRKAPNLIAPEVVE 66

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           +I++ P++     A   ++N +++   + +++L S+     +YG+ L     K+ +E  S
Sbjct: 67  KIEL-PEIFERVEATGPYVNFFINHDIFAKQLLDSV---DEDYGQ-LAAVDEKIILEHTS 121

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--- 186
           ANP GP+H+GH R +V+GD+L  L+  +GY V  +YY+ND G Q   LA+ V+   +   
Sbjct: 122 ANPNGPLHIGHIRNSVIGDSLRRLLTKAGYNVDTQYYVNDMGRQ---LAMIVYGMEELGL 178

Query: 187 ----QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP------EEKWLPIVKDY 236
               Q     D  + E Y+    +    + L D   + +  +       +EK+     +Y
Sbjct: 179 KLEDQPASKIDHKVGELYFKVNQMIKEDESLNDGVDATIRKYEGGPSELDEKF-----EY 233

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V + ++ +++ LK +N++HD F+ E  F R        I+DNL ++ Y           
Sbjct: 234 AVNSCLEGVKETLKRMNVKHDAFVWEGQFVRTG------IVDNLTQELY----------- 276

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                    R++ +    +   D+ + L+  ++DG+  Y   D+AY   K  +  D +I 
Sbjct: 277 ----DIGYARQEEVLYLDLSEFDIPKELVLRRADGTSLYSTRDIAYHIYK-SKNCDKIID 331

Query: 355 VMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
           + GSDH    +++E     + E      +I V+  E + L    M    S R G FI   
Sbjct: 332 IFGSDHKLAARQVELALEILEEIEPNSDKIEVIFYEFITLPEGSM----STRRGVFISVD 387

Query: 409 ------------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                                   T+  + +E+G  ++R+ +      + + F + +   
Sbjct: 388 ELMDEAVRRATEEIISRRPDLDKETIDKIAEEIGIGAIRYYIARLSPEKHITFKWDEA-- 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            S E     +QYA+AR   + ++A++   +   DL    V    S  D +E +L+  +A+
Sbjct: 446 LSFERGCASIQYAHARACKLLKKAQE---EKGIDLADLTVEDTWS-LDENEKELVKLIAK 501

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN---RKLTMMRLQ 561
           +P ++E++   +  + +A Y  DLAS F+            RF +A       +   RL 
Sbjct: 502 FPSLVEDSAKIRRVHPIAQYCQDLASAFN------------RFYKAEQVIGSDVENARLL 549

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV      + + L+++GV +P+ M
Sbjct: 550 LVEKSRITLRNALDLLGVSAPDMM 573


>gi|257387346|ref|YP_003177119.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169653|gb|ACV47412.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 591

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 246/571 (43%), Gaps = 117/571 (20%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           VDSV   G  ++N   S +Y  + L++      +YG+ L  + T V +E  SANPTGP+H
Sbjct: 75  VDSVEQRGP-YVNFLPSDAYFSETLAA--AQAEDYGQ-LPDRDTSVVVEHTSANPTGPVH 130

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDL 196
           VG  R  ++GD LA ++ ++GY+V R YY+NDAG Q     ++VF W Y+   ++ D DL
Sbjct: 131 VGRARNPIIGDALARVLDYAGYDVDRHYYVNDAGRQ-----MAVFTWAYE--TFDED-DL 182

Query: 197 PEGY-----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-------------V 238
           PE       Y  V     G    ++  ++ +   E +   I++                V
Sbjct: 183 PEPERDSPEYEMVRYYRKGNSFLEEADADRVEDAESEIQAILQGLEAGDEDAYERVGEVV 242

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL-ARQGYVYEGILPPPKSK 297
             ++  + + L  L  + D F+ E  F R D +   D++D L A    VYE        +
Sbjct: 243 DTVLGGMSETLGRLPAEFDEFVKETRFMRNDAT--EDLVDRLKALDQAVYE--------E 292

Query: 298 TTQKCDMD--RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              + D+    K L+F             L+SDG+  Y   DLA+ + K++  +D  + V
Sbjct: 293 DAWQLDLPGFEKNLVF-------------LRSDGTSLYTTRDLAHHEWKFDT-YDRAVTV 338

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G DH     +L+     +     Q++ +    V L   GM    S R G  I L  ++D
Sbjct: 339 LGEDHKLQADQLDTTLDLLGHDTDQLSQVFYSWVNLPEGGM----STREGTGIDLDDLLD 394

Query: 416 E---------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           E                                 VG  +VR+ ++ ++ ++ + F++ + 
Sbjct: 395 EAIDRAREEVESRIDTRSRDDDLDETDVERIAHQVGIGAVRYDIVSKQPTKGITFEWDRA 454

Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQESEFDTS 494
            + +++  P  YVQY +ARC  I  +A       K+  P+          +  ++E D  
Sbjct: 455 LDFEAQSAP--YVQYVHARCCGIRSEAEHAVEEGKEREPESTAADLDAAPLATDAERD-- 510

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L+  +A +P VIE A     P+ +A Y   LA  F+  +   RE P L       R 
Sbjct: 511 ---LLREIARFPAVIEQAADEHRPHVVATYTRTLAEQFNTFY---RECPVLDADPDTKR- 563

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               RL LV A    I + L+ IG+ +P  M
Sbjct: 564 ---ARLALVDAARHAIANALDAIGIAAPRSM 591


>gi|295397707|ref|ZP_06807779.1| arginine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974036|gb|EFG49791.1| arginine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 169/626 (26%), Positives = 281/626 (44%), Gaps = 113/626 (18%)

Query: 11  LKNYLKEIDCKIKVEKKI-LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           LKN + ++  K  +E ++ L++I  ++E P+   HG ++     I ++ L   P  IA+ 
Sbjct: 3   LKNQVAQV-IKSSIETELTLEQIQNLLEVPKHEGHGDIAF-PCFIFAKELRKAPQAIAQE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I+ +  VD V   G  +IN +L+ + + + IL+ I  +G  +G   IG G  + I+
Sbjct: 61  IAPQIEGEI-VDRVEAVGP-YINFFLNQTLVTQAILTEIYEAGNHFGELAIGHGENITID 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   PM +GH R  V+G+ +A++    G+   R  ++ D G Q   L +    W  
Sbjct: 119 MSSPNIAKPMSMGHLRSTVIGNAIANITTKVGFNPVRINHLGDWGTQFGKLIVGYKKWGS 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMK 243
           ++A+  N       YY   +         +  + E L      W   ++D   +  A+ K
Sbjct: 179 EEAVRENPIQELLKYYVQFH--------EEAENDESLEDEGRLWFKKLEDGDPEAYALWK 230

Query: 244 IIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +D+ LK     +DI   E D + G+      +  +ID L  +     G+L   +  T 
Sbjct: 231 WFKDESLKEFQRIYDILGIEFDSYNGEAFYSDKMPAVIDELDDK-----GLLKVDRGATI 285

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIY 354
              D++   L             P L  KSDG+  Y   DLA   Y K  Y   FD  +Y
Sbjct: 286 --VDLEAYNL------------NPALIKKSDGATLYITRDLATAIYRKNTY--NFDQSLY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+G++ S + K+L+AV   +  +  A IN +   L+   +DG   K+S R G+ + L  V
Sbjct: 330 VVGNEQSNHFKQLKAVLELMGYDWAADINHIPFGLIT--QDGK--KLSTRKGNVVLLEDV 385

Query: 414 VD-------------------------EVGSDSVRFMMLWRKNSELLDFDFC---KVKEQ 445
           ++                         +VG  +V F  L  KN  L  FDF     V+ +
Sbjct: 386 LNDAIDLAFKQINEKNPDLENKEEVAHQVGVGAVIFHDL--KNDRLNSFDFNLEEVVQFE 443

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSE-LQLIVHL 502
            +  P  YVQYA AR  SI R+            F    I + + F  D+ E  Q++  L
Sbjct: 444 GETGP--YVQYANARAHSILRKGN----------FEPAKISEMTNFNLDSDEAFQVLKEL 491

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMR 559
             YP ++ +A    EP  +A YL  L+  F+ +++H R   E+ +L+            R
Sbjct: 492 NRYPDIVASAYEKYEPSVVAKYLLALSQQFNKYYAHTRILTEDDQLQ-----------SR 540

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV+A+  ++ SGL I+GV++P++M
Sbjct: 541 LALVYALTQVLESGLAILGVQAPSQM 566


>gi|260891320|ref|ZP_05902583.1| arginine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858996|gb|EEX73496.1| arginine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 574

 Score =  134 bits (338), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 253/590 (42%), Gaps = 75/590 (12%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ I+       G   TN AM+ S+ +G +P  IA  +V   K +  ++ + IAG GFI
Sbjct: 26  EKVDIQNSTKKEFGDFQTNFAMVSSKLIGKNPREIASTLVDNFKENDIIEKLEIAGPGFI 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+YL  S+L + +    V   +Y  + +     V I++ S N    MH+GH R  ++GD+
Sbjct: 86  NIYLKNSFLNEEIKK--VENEKYDFSFLNTDKTVIIDYSSPNIAKRMHIGHLRSTIIGDS 143

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +  ++ F G+    + +I D G Q   L ++      +  Y  D   P G    +Y++  
Sbjct: 144 IKRILQFLGFHTLADNHIGDWGTQFGKLIVAYKNWLNKKAYEED---PIGELERIYVQFS 200

Query: 210 GK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +      L D+   EL      K L +  + + +   + I   LK  N  +D      D
Sbjct: 201 DEAKKNPALEDEAREEL------KKLQLGDEDNQKLWKEFIDISLKEYNKIYDRLDVNFD 254

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++ G+ S   D++            +L   K K   + D     + F +  +   +   +
Sbjct: 255 YYYGE-SFYNDMM----------PSVLEELKEKGIAREDQGALVVFFENDKLPPAI---V 300

Query: 325 LKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            K DGS+ Y  +DLA  K  K E   D  +Y+       + K++  +   + E       
Sbjct: 301 QKKDGSFLYTTSDLATMKFRKDELNVDEAVYLTDDRQQNHFKQVFEIGEMLGEPYNYKKT 360

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
            +   +  + DGM    S R+G+ I L  ++DE                           
Sbjct: 361 HVVFGIMRFGDGMI--FSSRSGNIIRLVDLLDEAKTQVKKVIDEKNPNIPEDEKENISEI 418

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VGS ++++  L +  +  + F + KV   +    P  Y+QY Y R  SIFR+ K    + 
Sbjct: 419 VGSGAIKYFDLSQNRTSDITFTWDKVLSFEGNTGP--YLQYTYVRIMSIFRKLK----EE 472

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D+   N+I    +    E +L   L  +P+ +  +  +  P  +A YL+D+A +F+  
Sbjct: 473 NIDVENENIIL--DDMTGIERELAAELLRFPQAVVKSYESYRPNIIADYLFDMAKLFNNF 530

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++          ++  N+K+   R+ LV   A ++  GL+++G+++ + M
Sbjct: 531 YNSS------SILKEENKKVMDARILLVKKTAFVLKEGLSLLGIKTVDRM 574


>gi|284166430|ref|YP_003404709.1| arginyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016085|gb|ADB62036.1| arginyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 595

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 154/641 (24%), Positives = 273/641 (42%), Gaps = 104/641 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L A+    L+  L E+D          D + IE P +     L+++ A  L+   G  
Sbjct: 3   LALRAEVEDALERALSELDFPT-------DDLGIEEPPEDVDSVLASSVAFRLAGEAGAP 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  +A  +   +  D       +  +G ++N   S +YL + L +       YG  L  +
Sbjct: 56  PPQVAGQLADELDADELTYVSEVQTQGPYLNFLPSDAYLAETLETATAET--YG-ALEDR 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T V +E  SANPTGP+HVG  R  ++GD +A+L+ ++GY+V R YY+NDAG Q+     
Sbjct: 113 DTSVVVEHTSANPTGPVHVGRARNPIIGDAVANLLDYAGYDVDRHYYVNDAGRQMAVFTW 172

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-- 237
           S +  + +A   ++ +     Y  V     G    +    + +   E +   I++     
Sbjct: 173 S-YETFDEAELESEPERDRKEYDLVRYYRKGNAFLENGPEDEVEEAEAEIESIMQGLEAG 231

Query: 238 -----------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                      V  ++  + + L+ L  + D F+ E  F R       D  D +AR   +
Sbjct: 232 DDEAYERVSEVVDQVLGGMTECLERLPAEFDEFVKETRFMRNG-----DTDDLVARLKEL 286

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E +            + D  QL       G D +   L+SDG+  Y   DLA+ + K++
Sbjct: 287 DEAVY-----------EEDAWQLELEDH--GIDKNLVFLRSDGTSLYATRDLAHHEWKFD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +D  + V+G DH    ++L      +      +  +L   V L       KMS R G 
Sbjct: 334 E-YDRAVTVLGEDHKLQARQLRTTLELLGNDTDGLRQVLYSYVNLPEG----KMSTRRGT 388

Query: 407 FITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSE 433
            + L  ++DE                                 VG  +VR+ ++ ++ ++
Sbjct: 389 GVDLDDLLDEAIDRAREEVEDRLDDRIRDDDLNEDDIERIAHQVGIGAVRYDIVSKQPTK 448

Query: 434 LLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVI 485
            + F++ +  + +++  P  YVQY +ARC  I  +A  + P       D++ +    +++
Sbjct: 449 AITFEWDQALDFEAQSAP--YVQYVHARCCGILEEAG-LDPETALAAQDVELEALEADLL 505

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             ++E D     L+  +A +P V++ A    EP+++A Y  + A  F+  +   RE P L
Sbjct: 506 ETDAEHD-----LLETIARFPAVVDEAADDLEPHQIATYTREFADRFNAFY---RECPVL 557

Query: 546 RF-VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V  + R+    RL LV A    + + L+I+GVE+P  M
Sbjct: 558 SDDVDPDVRE---ARLALVAASKHTVANALSILGVEAPRSM 595


>gi|134045611|ref|YP_001097097.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166232803|sp|A4FXF3|SYR_METM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|132663236|gb|ABO34882.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 566

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 266/607 (43%), Gaps = 118/607 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++ P     G  STN +  L++ L   P  IAE I   + I   ++ +  A  G+IN 
Sbjct: 25  IRLDEPPAINMGDYSTNISFRLAKDLKKAPKMIAEDIANSLSI-LGIEKIE-AVNGYINF 82

Query: 92  YLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +++ S + ++ +S I      +G+ L  +  KV +E  SANP GP H+GH R  V+GD+L
Sbjct: 83  FMNYSDFSKETVSKISAEKENFGK-LEKRDEKVILEHTSANPNGPFHIGHGRNMVIGDSL 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLK 207
             ++  SGY+V  +YY+ND G Q    A+ VF   +  L  +   D  + E Y     L 
Sbjct: 142 KRILIASGYDVETQYYVNDMGRQ---EAIVVFGNERFELDKSKKADHAIGEVYVETNKLL 198

Query: 208 HVGKELADKYSSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              +EL  +  + + N+ E           EK+   V DYS+       ++ L  LNI H
Sbjct: 199 AENEELEQEILNLMKNYEEACEAGIENELTEKFKNAV-DYSLGGF----KETLSTLNIYH 253

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D F+ E +F +     +RD+I  L   G V E                     +FR  + 
Sbjct: 254 DKFVWESEFVKS--GMVRDVIKRLMDTGKVVE-------------------DEVFRLDLS 292

Query: 317 GDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              +++ L+  + +G+  Y   D+ Y   K E   D  + ++G+DH      +    A +
Sbjct: 293 DYGLEKKLVLARLNGTSLYSTRDIVYHINKME-NCDFAVNLLGADHKLTAVMVNKTLALL 351

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------------- 419
              +A+  V+  E + L    M    S R G FI++  + +E  S               
Sbjct: 352 GYNEAE--VVFYEFISLPEGSM----STRRGRFISMDELFEEAKSRAAEEVRKRGVAENE 405

Query: 420 ------------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                        +VR+          M++R + E LDF+           PV  +QYA+
Sbjct: 406 EEIEEIAKRIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQYAH 455

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           ARC  I    + I  D   +LF         E + +E  ++  L++ P+++E A   ++P
Sbjct: 456 ARCSRILENVETISND---NLFA-------YEMNENEKTIVKLLSKLPKIVEKAAEVRKP 505

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y+ D+A  F+  +++    P L+     N  +   RL +V+   +++ + L+++G
Sbjct: 506 QIVANYVLDVAQGFNKFYANC---PVLK---EENETIKNSRLAIVNTTKTVLENTLDLLG 559

Query: 579 VESPNEM 585
           +E P +M
Sbjct: 560 IEMPGKM 566


>gi|57641170|ref|YP_183648.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68753983|sp|Q5JGH7|SYR_PYRKO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57159494|dbj|BAD85424.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 642

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 160/632 (25%), Positives = 270/632 (42%), Gaps = 122/632 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKI 101
           G   T  +  L+R     P  IAE +V R+K   P+      A  G+IN YL   +  K 
Sbjct: 44  GDFGTAVSFQLARVFRKAPKFIAEELVGRVKEKLPEEIRDVKAVNGYINFYLDYEFFGKA 103

Query: 102 L-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           L   I+  G +YG + +G G KV +E  S NPT P+H+GH R AV+GDT+A +M   GY 
Sbjct: 104 LVREILEKGEKYGESELGSGKKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRKLGYT 163

Query: 161 VTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKH--------V 209
           V  + YI+D G Q       V W Y   ++     +++L E      ++ H        V
Sbjct: 164 VEVQNYIDDLGVQF----AQVLWGYLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEV 219

Query: 210 GKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA---LNIQHDIFIS 261
            K+L      DK   EL+   EE    I  +   +   +++R  +     + I +D+   
Sbjct: 220 NKKLEENPEVDKEVRELMKKLEEGDNEIA-EVGRKLAERVVRAQMLTTYRMGITYDLLSW 278

Query: 262 EDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           E D  + G       +I+      +  EG       K      MD ++L         D+
Sbjct: 279 ESDIMKSGIFGEAYGLIEKNENFFWATEG-------KYKGAFVMDLRKLF-------PDM 324

Query: 321 DRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVM---------------GSDHSG 362
             P L   +SDG+ TY   D+AY   K+ +   +M+Y +               G +  G
Sbjct: 325 KNPFLVLRRSDGTATYTGKDIAYHLWKFGKVKADMLYKLWDRVEDHETWTTAPDGKEMPG 384

Query: 363 YVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPI--------------KMSKRAGD 406
              R + V   +   +K  Q+ +     +  + D                    S R G 
Sbjct: 385 KFGRADIVINVIGAEQKHPQMAIKYALQLLGFEDAAENFHHLAYEHVVRPEGSFSGRKGT 444

Query: 407 FITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQSKENPVFY----------- 453
           ++     VDEV +++V+    ++ +KN  L D +  ++ E      V Y           
Sbjct: 445 WVGF--TVDEVLNEAVQRARELVEQKNPNLSDEEKDEIAEAVGVGAVRYNLVKYSPDKVI 502

Query: 454 -----------------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD---T 493
                            +QYA+ARC SI R+A++   + D+     N + ++++F     
Sbjct: 503 TFRWEDVLNFEGDSAPYLQYAHARCASILRKAEESGVETDW-----NALLEKADFSKLTN 557

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E +LI  LA++P V+E+A    +P+ +  YL +LAS+F+  +    ++P L+  +    
Sbjct: 558 REKELIKFLAKFPEVLESAGRDVKPHLVPAYLNELASLFNRFYM---DHPVLKAEEG--- 611

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   RL LV AV  ++ +GL+++G+++P  M
Sbjct: 612 -IREERLLLVLAVKQVLRNGLDVLGIKAPERM 642


>gi|58699515|ref|ZP_00374239.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533969|gb|EAL58244.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 151

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 10/161 (6%)

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L      
Sbjct: 1   MLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLLRTG-- 58

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+ +  +
Sbjct: 59  --------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGKSDLNM 110

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EMS
Sbjct: 111 RFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 151


>gi|242399898|ref|YP_002995323.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259511659|sp|C5ZZZ3|SYR_THESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|242266292|gb|ACS90974.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 644

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 165/676 (24%), Positives = 287/676 (42%), Gaps = 128/676 (18%)

Query: 4   FADFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + D  +++   LK I  ++  K  K     I+ +   +   G  +T  A +L++     P
Sbjct: 3   YDDIKAKVGELLKTIISEMLEKEGKTWEGEILFDETPNMEFGDFATTVAFLLAKVFKKAP 62

Query: 62  LTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIG 118
             IA+ I + +  K+   +  V +AG G+IN +L      K+ +  I+  G  +G + IG
Sbjct: 63  RIIAQEIASNLEDKLPEYIAKVEVAGAGYINFFLDYEKFSKLTVKEILQKGEHFGESKIG 122

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KV +E  S NPT P+H+GH R AV+GDT+A +M   GY V  + YI+D G Q     
Sbjct: 123 EGKKVIVEHTSVNPTKPLHMGHARNAVLGDTVARIMRALGYNVEVQNYIDDLGVQF---- 178

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP--EEKWLPI 232
             V W Y       +S + E    G+     L H    L  +   ++  +P  E +   I
Sbjct: 179 AQVLWGYLNMREEFESIIKELKEKGLSKEDILDHALGLLYVEVHKKMEEYPEVEREIRSI 238

Query: 233 VKDYS------VQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           +K+         +   K+  D +KA       L+I +D+   E D  R            
Sbjct: 239 MKELEKEDNEISEKGRKLAEDVVKAQMKTTYRLSISYDLLSWESDIVRS----------- 287

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMV---GD---DVDRP---LLKSDG 329
                    GI      +  +    +  Q   ++   +   GD   D++ P   L++SDG
Sbjct: 288 ---------GIFEESYKRIQENSHFEWAQEGKYKGAFIMKLGDLFPDLENPDTVLIRSDG 338

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMG---SDHSGYV--KRLEAVAAAVSEKKAQINVL 384
           + TY   D+AY   K+ +   +M Y +    +DH  +   K  E +    +  +  INV+
Sbjct: 339 TATYTGKDIAYHLWKFGKVSADMRYKVWDKINDHKTWTTAKDGERMPGRFANAEIVINVV 398

Query: 385 LCE----------LVRL------YRDGMPI----------KMSKRAGDFI--TLRHVVDE 416
             E           ++L      Y +   +          K S R G +I  T+  V+DE
Sbjct: 399 GSEQRYEQMAVAYALKLLGYEEEYHNFHHLAYEHVVRPEGKFSGRKGTWIGFTVDEVLDE 458

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  +VR+ ++     +++ F +  V     E+
Sbjct: 459 AVKRAKELVEEKNPSLSGEEKEKIAEIVGVGAVRYNLVKYSPEKIITFRWEDVLNFEGES 518

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+ARC SI ++A +   ++D D   +N     S+ D  E +LI  ++++P ++
Sbjct: 519 AP-YIQYAHARCASILKKAMEEGINIDKDALLKNA--DFSKLDNKEKELIKIISKFPEIV 575

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A    +P+ LA Y  +LA VF+  +      P L+  +     +  +RL LV A   +
Sbjct: 576 KTAGRDIKPHLLATYANELAMVFNSFYMA---LPVLKAEEG----VRELRLLLVIATKQV 628

Query: 570 INSGLNIIGVESPNEM 585
           + + L ++G+E+P  M
Sbjct: 629 LKNTLGLMGIEAPEVM 644


>gi|150399104|ref|YP_001322871.1| arginyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166232807|sp|A6UP37|SYR_METVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150011807|gb|ABR54259.1| arginyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 569

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 268/617 (43%), Gaps = 109/617 (17%)

Query: 22  IKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           + +EKK+LD       I ++ P     G  STN A  LS+ L   P  IAE I + + I 
Sbjct: 9   VAIEKKVLDLTGKQIEIRLDEPPSINMGDYSTNIAFRLSKELKKAPKIIAEEITSSLSI- 67

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTG 134
           P ++ +  +  G+IN ++  S   K  +  + S  E +G++ + K  KV +E  SANP G
Sbjct: 68  PGIEKIE-SLNGYINFFMDYSVFSKETTLEINSKQENFGKSDL-KNKKVILEHTSANPNG 125

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL---YN 191
           P H+GH R  V+GD+L  ++  +GY V  +YY+ND G Q    A+ VF   +  L     
Sbjct: 126 PFHIGHGRNMVIGDSLKRILNAAGYTVETQYYVNDMGRQ---EAIVVFGNDRFKLDKSKK 182

Query: 192 NDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +D  + + Y     L +  +        L   Y   + N  E +     K+ +V+  +  
Sbjct: 183 SDHAIGQTYVEANKLLNENEELEQEILNLMKNYEEAMENGIENEITEKFKN-AVEYALTG 241

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            ++ L  LNI HD F+ E +F R     +R++I+ L   G V E              D+
Sbjct: 242 FKETLSTLNIHHDKFVWESEFVRS--GLVRNVINRLMETGKVTEE-------------DV 286

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R  L    +  G +    L + +G+  Y   D+AY   K E   D  + ++G+DH    
Sbjct: 287 YRLDL----SEFGIEKKLVLARLNGTSLYSTRDVAYHMTKME-NCDFAVNLLGADHKLTG 341

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
             +    A +   +A+I  +  E + L        MS R G FI++  + +E        
Sbjct: 342 IMVNKTLALLGYNEAEI--VFYEFISLPEGS----MSTRQGRFISMDELFEEAKLRAREE 395

Query: 417 ---------------------VGS---DSVRFM----MLWRKNSELLDFDFCKVKEQSKE 448
                                VG+   + VR      M++R + E LDF+          
Sbjct: 396 VKKREVAKTEEEIEEIAKKIAVGAVRYNIVRISPEKPMVFRWD-EALDFEKVGC------ 448

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
            PV  +QYA+ARC  I    +        +LF       E E   +E  ++  +++ P +
Sbjct: 449 -PV--IQYAHARCSRILENCEPSGLVNSKNLF-------EYEMAENEKIIVKLISKLPEI 498

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E +   ++P  LA Y  +LA  F+  + +       R ++  N  +   R+ +V++   
Sbjct: 499 VEKSAEVRKPQILANYALELAQGFNKFYGN------CRILKEENETVRNSRIMIVNSTKL 552

Query: 569 IINSGLNIIGVESPNEM 585
           ++ + L+++G+E P +M
Sbjct: 553 VLENSLDLLGIEMPGKM 569


>gi|320102292|ref|YP_004177883.1| arginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749574|gb|ADV61334.1| arginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 692

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 156/623 (25%), Positives = 255/623 (40%), Gaps = 104/623 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++  G++P  +A  +  R+ + P  +   +AG GF+N+ L+  +L + L
Sbjct: 94  GDYQANGCMAAAKTAGVNPRDLAAAVAQRVDLAPLANPPEVAGPGFLNITLTTPFLAETL 153

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              +VSG     +  G    + ++F S N   PMHVGH R  V+GD LA +    G++V 
Sbjct: 154 KHRLVSG-RLLDDCPGTPQTIIVDFSSPNVAKPMHVGHLRSTVIGDALARIFEALGHKVW 212

Query: 163 REYYINDAGAQINTLALSVFWRYQQ----------------ALYNNDSDLPE-----GYY 201
           R+ ++ D GAQ       + W Y+                  LY   +DL +     G  
Sbjct: 213 RDNHLGDWGAQFGM----ILWGYRHLRDPIAYAKNPVRELARLYRKVNDLSKPAEELGEK 268

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN--IQHDIF 259
               LK + +   D+ +  +L   + +  P  ++  V  + K I   L+ L   + H   
Sbjct: 269 LDKVLKMLDEGRRDEAARLVLKLFDGRETPTPEE--VAKLSKRIASRLRVLQEKVAHARA 326

Query: 260 ISE------DDFHRGDPSPIR----------DIIDNLARQ------GYVYEGILPPPKSK 297
           ++E         H GDP   R            ++ + R+        + E    P  + 
Sbjct: 327 VTEATRRETAKLHAGDPENRRLWNEFMPHCLRALEAVYRRLDIRFDTQLGESFFDPMLAD 386

Query: 298 TTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF-D 350
                D+  K L   S     +  +  + P L  K DG+Y Y   DLA  K + E    D
Sbjct: 387 VV--ADLQAKGLAVESEGALAVFNEGANAPFLIRKRDGAYNYATTDLATIKHRVETYHPD 444

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++YV+    S + K+L A A         + V +     L RDG P K   RAGD + L
Sbjct: 445 RVLYVVDHRQSDHFKQLFATARRWGYDTVDL-VHVSFGTILGRDGRPYKT--RAGDVVGL 501

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD  K+ 
Sbjct: 502 ESLLDEAVAQARKVVEENSPDLKPAEKAKVARIVGLGAVKYADLSQNRTSDYKFDLDKMT 561

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502
             +  N   Y+QYAYAR RSIFR+       +D   F +     E  F+  +E  L V L
Sbjct: 562 AMNG-NTATYLQYAYARNRSIFRKG-----GVDPAKFAKKAGSIELIFNHPAERGLAVKL 615

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             YP  +E A    +P  L  YL+ LA+ +   +    E P L+  +++ R+ +  RL L
Sbjct: 616 VRYPEAVELAAAELKPNILTDYLFQLATTYSSFFE---ECPVLK-AESDERRDS--RLAL 669

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  + +GL ++G+ +   +
Sbjct: 670 CELTARTLKAGLGLLGIGTAERL 692


>gi|150402195|ref|YP_001329489.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166232804|sp|A6VFW2|SYR_METM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150033225|gb|ABR65338.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 566

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 268/609 (44%), Gaps = 122/609 (20%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFI 89
           I ++ P     G  STN +  L++ L   P  IAE I   + I     +++V     G+I
Sbjct: 25  IRLDEPPAINMGDYSTNISFRLAKDLKKAPKVIAEDIANSLNISGIEKIEAV----NGYI 80

Query: 90  NLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N +++ S + ++ +S I+     +G+ L  +  KV +E  SANP GP H+GH R  V+GD
Sbjct: 81  NFFMNYSDFSKETVSKIIDEKENFGK-LEKRHEKVILEHTSANPNGPFHIGHGRNMVIGD 139

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVY 205
           +L  ++  SGY+V  +YY+ND G Q    A+ VF   +  L  +   D  + E Y     
Sbjct: 140 SLKRILVASGYDVETQYYVNDMGRQ---EAIVVFGNEKFELDKSKKADHAIGEVYVETNK 196

Query: 206 LKHVGKELADKYSSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           L    +EL  +  + + N+ E           EK+   V DYS+       ++ L  LNI
Sbjct: 197 LLAENEELEQEILNLMKNYEEACEAGIENELTEKFKNAV-DYSLGGF----KETLSTLNI 251

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
            HD F+ E +F +     +R++I  L   G V E                     +FR  
Sbjct: 252 YHDKFVWESEFVKS--GMVREVIKRLMDTGKVVE-------------------DEVFRLD 290

Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +    +++ L+  + +G+  Y   D+AY   K E   D  + ++G+DH      +    A
Sbjct: 291 LSDYGLEKKLVLARLNGTSLYSTRDIAYHINKME-NCDFAVNLLGADHKLTAVMVNKTLA 349

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------------- 419
            +   +A+  V+  E + L    M    S R G FI++  + +E  S             
Sbjct: 350 LLGYNEAE--VVFYEFISLPEGSM----STRRGRFISMDELFEEAKSRAAEEVRKRGVAE 403

Query: 420 --------------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                          +VR+          M++R + E LDF+           PV  +QY
Sbjct: 404 SEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQY 453

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+ARC  I    + I  D   +LF         E + +E  ++  L++ P+++E A   +
Sbjct: 454 AHARCSRILENVEIISND---NLFA-------YEMNENEKTIVKLLSKLPKIVEKAAEVR 503

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +A Y+ D+A  F+  +++    P L+     N+ +   R+ +V+    ++ + L++
Sbjct: 504 KPQIVANYVLDVAQGFNKFYANC---PVLK---EENQIIKNSRIAIVNNTKMVLENTLDL 557

Query: 577 IGVESPNEM 585
           +G+E P +M
Sbjct: 558 LGIEMPGKM 566


>gi|268325386|emb|CBH38974.1| arginyl-tRNA synthetase, N-terminus [uncultured archaeon]
          Length = 507

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 86/514 (16%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           +  H  +++  A  L+R     P  IAE IV  +  +  + S  +A   +IN Y+S  +L
Sbjct: 29  ESEHADIASTVAFSLARVYKRAPKEIAEDIVNHLPAELTLISHAVATGPYINFYVSDFFL 88

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K L  +  +G+E       KG K+ IE  SAN  GP+H+GH R A++GD LA ++  +G
Sbjct: 89  HKTLQRLR-AGLETVEK--NKG-KIIIEHTSANADGPLHIGHLRNAIIGDVLARVLKRAG 144

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           ++V  +YY+ND G QI   A++V+   + AL  +     +     VY+    +EL +   
Sbjct: 145 FDVETQYYVNDLGRQI---AVAVWGAGRMALAADKK--ADHAVADVYIA-ANRELEE--H 196

Query: 219 SELLNFPEEKWL-------PIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           SE LN  EE            VK Y   V   +  +++ LK LNI+HD+F+ E +F R  
Sbjct: 197 SEYLNAVEELMRKYEAGDDATVKRYETVVNTCLTGVKETLKRLNIKHDLFVLEGEFVR-- 254

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +++ L ++G V                 +D   LL +  + G + +  + +SDG
Sbjct: 255 SGAVDAVVNELMQKGDV----------------KLDGTALLLQ--LEGIEKELVIKRSDG 296

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           +  Y   DLAY + K  R  D MI V G DH    ++L    A +S K  +   ++   V
Sbjct: 297 TSLYTTRDLAYHRWKSNR-CDRMIDVFGKDHELVSQQLTKALALLSVKAPE--YVIFAFV 353

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L    +   +S RAG +I+   ++++                           VG  ++
Sbjct: 354 SL----LSGSLSTRAGRYISADELIEKIEERAYEAVEKRRDDLDEVKKPEIARMVGIGAL 409

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLF 480
           R+ M+     + + FDF    +  K+   F VQYA+AR  SI R   AK    D   D++
Sbjct: 410 RYDMVKVSPDKHIVFDFDDALDIEKKGAPF-VQYAHARACSILRAAAAKGALTD---DVY 465

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              ++ ++     SEL+LI  L+++  +I    +
Sbjct: 466 DSALLRED-----SELELIKMLSKFEYLIAGVAL 494


>gi|313127564|ref|YP_004037834.1| arginyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293929|gb|ADQ68389.1| arginyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 584

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 157/625 (25%), Positives = 264/625 (42%), Gaps = 134/625 (21%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-F 88
           D + +E P +     L+++ A  ++  +G  P  +A  I   I   P         +G +
Sbjct: 25  DDLGVEEPPEDVPATLASSVAFRMASEVGAPPPKVAADIADAIDATPYTYLERAEPQGPY 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N ++S +Y  + L +      EYG +L   G  V IE  SANPTGP+HVG  R  ++GD
Sbjct: 85  VNFFVSDAYYAETLEA--GRDEEYG-HLPETGKDVVIEHTSANPTGPVHVGRARNPILGD 141

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG-------- 199
            +A ++ F+G +V R YY+NDAG Q+     +VF W Y+     ++S+LPE         
Sbjct: 142 AIARVLEFAGNDVDRHYYVNDAGRQV-----AVFTWAYETF---DESELPEPERDRSDYD 193

Query: 200 ---YY--PGVYLKHV-----------------GKELADKYSSELLNFPEEKWLPIVKDYS 237
              YY     YL+                   G E  D+ + E +         +V D  
Sbjct: 194 LVRYYRKGNAYLEDADEDEVEAAEAEIAEIMQGLEAGDEETYERV--------AVVVDQV 245

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGY-VYEGILPPPK 295
           +  M    R+ L+ L    D FI E  F R GD     D+++ L    Y VYE       
Sbjct: 246 LGGM----RESLERLPAFFDEFIKETKFIRNGDAD---DVVERLKDSEYAVYE------- 291

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                   +D  +  F   +V        L+SDG+  Y   DLA+ + K+   +D  + V
Sbjct: 292 ---EDAWQLDLSEFGFEKNLV-------FLRSDGTTLYTTRDLAHHEWKF-NNYDEAVTV 340

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G DH    ++L+A    +     Q+       V L   GM    S R G  + L  ++D
Sbjct: 341 LGEDHKLQAEQLDAALEILGNDTDQLRQTFYSWVNLPEGGM----STRKGTGVDLDDLLD 396

Query: 416 E---------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           E                                 VG  +VR+ ++ ++ ++ + F++ + 
Sbjct: 397 ESVKRAREEVEERLDSRIRDDDLDEEDIERIARQVGIGAVRYDIVSKQPTKGITFEWERA 456

Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIV 500
            + +++  P  YVQY +ARC  I  +A     +   ++         S  DT +E +L+ 
Sbjct: 457 LDFEAQSAP--YVQYVHARCCGILNEASAAGIEAATEM---------SLLDTEAEQELLR 505

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +A +P V+E A    EP+ +A Y+ + A  F+  +           + A++  +   RL
Sbjct: 506 VIARFPAVVEQAADDLEPHVVATYVREFAETFNTFYRE------CSVLNADDDDIAAARL 559

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            LV A    + + L ++G+E+P  M
Sbjct: 560 GLVEAAQHTVANALYMLGIEAPESM 584


>gi|119872100|ref|YP_930107.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166232829|sp|A1RS32|SYR_PYRIL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119673508|gb|ABL87764.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 632

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 242/541 (44%), Gaps = 103/541 (19%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL--SVF 182
           +E  SANP  P+H+GH R A++GD+L  L+ F G  V   +Y++D G Q+   A+  +V 
Sbjct: 115 VEHTSANPIHPLHIGHGRNAILGDSLVRLLRFCGNVVQSHFYVDDCGVQVMYAAIGYNVV 174

Query: 183 WRY-QQALYNNDSDLPEG-YYPGV--------YLKHVGKELADKYSSELLNFPEEKWLPI 232
            +Y  + L     D+  G  Y  V          K + KE  D+   E++N   + W+ +
Sbjct: 175 KKYVDEVLKRTKPDVVIGAIYSAVNAIAEINRLKKELEKEKDDEKRREIIN-EIDSWVSV 233

Query: 233 VK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDII--------D 278
           +K   D   + + K++ + L   NI  +       +  GDP     +R+++        +
Sbjct: 234 LKRLIDTEGEVINKLV-EVLGQRNIVEEAAELNKRYETGDPEVKKIVREVVELVLKGQRE 292

Query: 279 NLARQGY------------VYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDD--- 319
            LAR G             V+ G    ++   + +  Q  D     ++FR+    +D   
Sbjct: 293 TLARLGIELDSWDYESDIAVWSGEATRVVSELRRRWPQYIDDRGGAVVFRADKFVEDFKL 352

Query: 320 ---VDRP-------LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
              +D P       L +SDG+  Y   D+AY   +  RGFD +I V+ ++ +     +  
Sbjct: 353 WDVLDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQARRGFDKVIRVISTEQTHEQAHVRI 412

Query: 370 VAAAVSEKKAQINVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416
           +  A+  +     ++    E+V L   GM  KMS R G +I+L  ++DE           
Sbjct: 413 ILYALGYEDVAKKLIHYAYEMVNL--PGM--KMSARRGQYISLDEILDEAVERSADLVKE 468

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  SVR+  L     + ++F +  V    ++N   ++QY Y R  SI
Sbjct: 469 KNPEIAGIIAERVGVGSVRYAFLSTSPRKPIEFKWETVLNM-RQNSGPFLQYTYVRAYSI 527

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             +A++I  DL     P+ ++P+E E       LI+ +AE+P V+  AT A  P  +A +
Sbjct: 528 LEKAQEI--DLKKVAIPKEILPEERE-------LILKVAEWPSVVREATRALRPDYVAEF 578

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L  LA +F+ ++      P L+        +   RL LV++V +++ +G  I+G+ +  +
Sbjct: 579 LDGLALIFNSYYEKA---PVLK----TEEPVRSFRLALVNSVKTVLAAGFYILGIPTLTK 631

Query: 585 M 585
           M
Sbjct: 632 M 632


>gi|240102754|ref|YP_002959063.1| arginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910308|gb|ACS33199.1| Arginyl-tRNA synthetase (argS) [Thermococcus gammatolerans EJ3]
          Length = 640

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 158/633 (24%), Positives = 268/633 (42%), Gaps = 126/633 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKI 101
           G   T  A  L+R     P  IAE +V RI+  P+      A  G+IN Y+  SY  R++
Sbjct: 44  GDFGTAVAFQLARVFRKAPKLIAEELVERIE-KPEGIVEVKAVNGYINFYVDYSYFGREL 102

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +  I+  G  YG + +GKG KV +E  S NPT P+H+GH R AV+GDT+A +M   GY+V
Sbjct: 103 VREILGKGEAYGESELGKGRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKV 162

Query: 162 TREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             + YI+D G Q       V W Y   ++     +++L E      ++ HV   L  + +
Sbjct: 163 EVQNYIDDLGVQF----AQVLWGYLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVN 218

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDD---------------LKA-------LNIQH 256
             +   PE        D  V+ +MK + +                +KA       + I +
Sbjct: 219 KRIEENPE-------VDKEVRELMKKLEEGNNEIAEIGRKLAERVVKAQMLTTYRMGIAY 271

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+   E D  R        I +   R     E      + K      MD ++L       
Sbjct: 272 DLLSWESDIMRS------GIFEEAYRLIEANENFFWGREGKYKGAFVMDLRKLF------ 319

Query: 317 GDDVDRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVM---------------GS 358
             D+  P L   +SDG+ TY   D+AY   K+ +   +M+Y +               G 
Sbjct: 320 -PDMKNPFLVLKRSDGTATYTGKDIAYHLWKFGKVKADMLYKLWDKRENHETWTTAPDGE 378

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL--YRDGM--------------PIKMSK 402
           +  G   R + V   +  ++    + +   ++L  + D                  K S 
Sbjct: 379 EMPGRFGRGDIVINVIGAEQRHPQMAIKYALQLLGFEDSAENFHHLAYEHVVRPEGKFSG 438

Query: 403 RAGDFITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQSKENPVFY--VQYA- 457
           R G ++     VDEV +++V+    ++ +KN  L + +  ++ E      V +  V+Y+ 
Sbjct: 439 RKGTWVGF--TVDEVLNEAVQRARELVEQKNPNLSEEEKDEIAEAVGVGAVRFNLVKYSP 496

Query: 458 -------------------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
                                    +ARC SI R+A++   + +++          S+  
Sbjct: 497 DKIITFRWDDVLNFEGESAPYIQYAHARCASILRKARESGVETEWEKLLEKA--DFSKLT 554

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E +LI  LA++P VIE+A    +P+ +  YL +LAS+F+  +    ++P L+      
Sbjct: 555 LREKELIKLLAKFPEVIESAGRDIKPHLVPAYLNELASLFNKFYM---DHPVLKAEDG-- 609

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL LV AV  ++ +GL ++G+E+P +M
Sbjct: 610 --IREERLLLVLAVKQVLRNGLELLGIEAPEKM 640


>gi|153865014|ref|ZP_01997700.1| Arginyl-tRNA synthetase [Beggiatoa sp. SS]
 gi|152145491|gb|EDN72300.1| Arginyl-tRNA synthetase [Beggiatoa sp. SS]
          Length = 222

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 2/164 (1%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           MIL++ L + P  +A  I+  + ID + +  V IAG GFIN++L+    R ++  I+ + 
Sbjct: 1   MILAKALKMRPRDLAARIIEHLSIDDELIAKVEIAGPGFINVFLTLKAYRAVIDDILTAQ 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
             YGR+ +G G  V IEFVSANPTGP+HVGH R A  G  LA L+  +G++V +EYY+ND
Sbjct: 61  TAYGRSQMGAGQSVMIEFVSANPTGPLHVGHGRGAAYGAALAHLLTTAGFKVHQEYYVND 120

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           AG Q++ LALSV+ RY + L       P   Y G Y+  +   L
Sbjct: 121 AGRQMDILALSVWLRYLE-LCGESVIFPANAYQGDYVWDIAASL 163


>gi|45358589|ref|NP_988146.1| arginyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74554456|sp|Q6LYG5|SYR_METMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|44921347|emb|CAF30582.1| Arginyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 566

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 266/602 (44%), Gaps = 108/602 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++ P     G  STN +  L++ L   P  IAE I   + I   ++ +  A  G+IN 
Sbjct: 25  IRLDEPPAINMGDYSTNISFRLAKDLKKAPKMIAEDIANSLSI-LGIERIE-AVNGYINF 82

Query: 92  YLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +++ S + ++ +S I      +G+ L  +  KV +E  SANP GP H+GH R  V+GD+L
Sbjct: 83  FMNYSDFSKETVSKISDEKENFGK-LEKRNEKVILEHTSANPNGPFHIGHGRNMVIGDSL 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLK 207
             ++  SGY+V  +YY+ND G Q    A+ VF   +  L N+   D  + E Y     L 
Sbjct: 142 KRILIASGYDVETQYYVNDMGRQ---EAIVVFGNEKFELDNSKKADHAIGEVYVETNKLL 198

Query: 208 HVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
              +EL  +  + + N+        E  L      +V   +   ++ L  LNI HD F+ 
Sbjct: 199 AENEELEQEILNLMKNYESACEAGIENELTEKFKNAVNYSLGGFKETLLTLNIYHDKFVW 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E +F +     +R++I+ L   G V E                     ++R  +    ++
Sbjct: 259 ESEFVK--SGMVREVINRLMNTGKVVE-------------------DEVYRLDLSDYGIE 297

Query: 322 RPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           + L+  + +G+  Y   D+AY   K E   D  + ++G+DH      +    A +   +A
Sbjct: 298 KKLVLARLNGTSLYSTRDIAYHITKME-NCDFAVNLLGADHKLTAVMVNKTLALLGYNEA 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419
           +  V+  E + L    M    S R G FI++  + +E  S                    
Sbjct: 357 E--VVFYEFISLPEGSM----STRKGRFISMDELFEEAKSRAAEEVRKRGVAQSEEEIEE 410

Query: 420 -------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                   +VR+          M++R + E LDF+           PV  +QYA+ARC  
Sbjct: 411 IAKKIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQYAHARCSR 460

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I    ++I  +   +LF  ++       + +E  ++  L++ P+++E A   ++P  +A 
Sbjct: 461 ILENVENISNE---NLFAYDM-------NENEKTIVKLLSKLPKIVEKAAEVRKPQIVAN 510

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+  +++    P L+     N  +   RL +V    +++ + L+++G+E P 
Sbjct: 511 YVLDVAQGFNKFYANC---PVLK---EENETVKNSRLAIVSTTKTVLENTLDLLGIEMPG 564

Query: 584 EM 585
           +M
Sbjct: 565 KM 566


>gi|254166583|ref|ZP_04873437.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596239|ref|YP_003482935.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624193|gb|EDY36754.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534026|gb|ADD08373.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 550

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 248/563 (44%), Gaps = 83/563 (14%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ +  +P  IA+ I  ++K D   + +   G  ++N ++    L ++    ++SG  +
Sbjct: 41  LAKEMKKNPALIAKDIAEKLK-DEYFEKIEAVGP-YVNFWIHTRKLAELTLQEILSGEIF 98

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                 K  KV +E  SANPTGP+HVG  R +++GD+LA +M   GY+V  +Y++ND G 
Sbjct: 99  K---FQKREKVIVEHTSANPTGPLHVGRTRNSIIGDSLARVMRKYGYDVEVQYFVNDVGK 155

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--- 229
           Q+ TL   +     + +   + D    Y    Y +   +EL +K         E  W   
Sbjct: 156 QVATLLWGI-----KNIKIEEKDTRGDYRYVPYYQAAYREL-EKNPKIEEEIQEIIWKYE 209

Query: 230 -----LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
                L  + +  V +++K I + LK +NI  D FI E        +  RD+ D+L  + 
Sbjct: 210 RGDEELRKMAEKYVGSVLKGIEESLKNINIHFDSFIWESSL----VNRARDVADSL--KD 263

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGSYTYFAADLAYFKC 343
           Y+ E               +D K+L           DR  L + DG+  Y   D+AY   
Sbjct: 264 YLKE---------DDGAFYIDLKELGVEGK------DRLYLFRRDGTTLYPLRDIAYHLL 308

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK- 402
           K ER   N + V+G DH  + + ++ +   ++E   +++ L    V+L    M  +  K 
Sbjct: 309 KGERARKN-VDVLGEDHKLHFQAIKKIVEILNE-NIELDALFYSFVKLPEGKMSTRQGKV 366

Query: 403 ------------RAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSELLDFDFCKV 442
                       R  + I  R    E        +   ++RF +L  +  + + F +   
Sbjct: 367 VYLDDLLKEAEARVNEIIKNREYEKEEMEKIRRAIAVGAIRFHILNVQEEKPMTFRWEDA 426

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                E+  F +QY +AR  SI R+  +   +   D       PQ       E++L+  +
Sbjct: 427 LNFEGESAPF-IQYTHARAASILRKT-NWNGEYSIDYISH---PQ-------EIKLLKLM 474

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A+YP ++ENA     PY +A Y Y LAS F+  +   R+ P L+    N R     RL +
Sbjct: 475 AKYPSMVENAVRRLSPYIMARYAYTLASQFNQFY---RDCPVLK-ADDNTRN---TRLAI 527

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V A   +I   L ++G+E+P +M
Sbjct: 528 VKAFKKLIKDVLELLGIEAPEKM 550


>gi|16332034|ref|NP_442762.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501048|sp|Q55486|SYR_SYNY3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1001346|dbj|BAA10833.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
          Length = 584

 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 249/585 (42%), Gaps = 82/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ L++ LG  P  IA  IV ++ +    + + IAG GFIN+ L P YL + L
Sbjct: 40  GDFQCNIALPLAKQLGQPPRAIAMEIVDKVNLSEICEPLTIAGPGFINIKLLPDYLGEQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +     + G +L+    ++ ++F S N    MHVGH R  ++GD LA ++ F GY+V 
Sbjct: 100 IKLQ-QNQQLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y +AL   D+              +G +L   Y     
Sbjct: 159 RLNHVGDWGTQFGMLITYLKEVYPEALVTADA------------LDIG-DLVTFYKQAKQ 205

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLA 281
            F +++     ++ S QA++ +   D K++       + E    R +   I D +D  + 
Sbjct: 206 RFDQDEQF---RETSRQAVVALQAGDAKSIKAWQ--LLCEQ--SRREFQLIYDCLDITIE 258

Query: 282 RQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDR-PLL--KSDGSYTYF 334
            +G  +     P   +  Q+ D+    +  Q +F       D DR PL+  KSDG Y Y 
Sbjct: 259 ERGESFYNPFLPGVVELLQEKDLLVEDNGAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYA 318

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
             DLA    +    G + +IYV  +  + +  +   VA  A +     Q+  +   LV+ 
Sbjct: 319 TTDLAALNYRLNTDGAEKIIYVTDAGQANHFAQFFQVAEKAGILTDPTQVVHVPFGLVK- 377

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSD 420
             DG   K+  RAGD I L+ ++ E                               VG  
Sbjct: 378 GEDGK--KLKTRAGDTIRLKDLLTEAVTRARQDLETRLTAEERSETEEFKTEVAQRVGIG 435

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    F F K+    + N   Y+ YAYAR +SI R+    F  +D    
Sbjct: 436 AVKYADLSQNRTSDYVFSFDKMLA-LQGNTAPYMLYAYARIQSISREGGIDFAQMD---- 490

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              ++  E     +EL L  +L ++  VIE   I+  P +L  YLY+L+ VF+  + +  
Sbjct: 491 SGEIVLTEP----TELVLAKNLLQFADVIETVEISLLPNRLCDYLYELSKVFNRFYEN-- 544

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P L+            RL L    A  +  GL+++G+   + M
Sbjct: 545 -CPVLKASDPQRGS----RLLLCDLTARTLKLGLSLLGIPVLDRM 584


>gi|90408772|ref|ZP_01216917.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310116|gb|EAS38256.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 582

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 255/607 (42%), Gaps = 99/607 (16%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I  R+VI+R +D +HG  ++N A++L++P   +P  +AELIV  +     +    IAG G
Sbjct: 26  IQPRLVIDRTKDKSHGDFASNLALMLAKPAKQNPRALAELIVKNLPTSDIIIKTEIAGPG 85

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN +++P+YL K + S   S       L      V I++ S N    MHVGH R  ++G
Sbjct: 86  FINFFINPNYLEKQIDSAYASE-RLDVELTEVPQTVVIDYSSPNLAKEMHVGHLRSTIIG 144

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTL-------------------ALSVFWRYQQA 188
           D++   + F G  V R+ ++ D G Q   L                    L VF+R  + 
Sbjct: 145 DSVVRALEFQGNNVVRQNHVGDWGTQFGMLLAYMEELRAEGQEIKKDLANLEVFYRAAKC 204

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--VKDYSVQAMMKIIR 246
            ++      E        +H+  EL +     L+ + E K + I   +D   +  + + R
Sbjct: 205 RFDESEAFAE------RARHLVVELQNGNEECLVLWTEFKEISISHCQDAYRRLGVSLER 258

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            D++  +  +D               + ++I +L  +G + E       S+      +DR
Sbjct: 259 KDVRGESAYND--------------DLSNVIRDLKEKGLLQE-------SQGANVVFLDR 297

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVK 365
               F++   G+ +   + K DG + Y  +DLA  + +      + ++Y + +    + +
Sbjct: 298 ----FKNKE-GEPLPVIIQKKDGGFLYATSDLAAIRYRQSVLNANRVLYFVDARQGLHFQ 352

Query: 366 RLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKM----SKRAGDFIT---------- 409
           ++  VA  A+  ++   +  +    V +  DG P K     + +  D +T          
Sbjct: 353 QVFEVARLASFVKETTPLEHMAFGTV-MGEDGKPFKTRTGSTPKLADLLTEAEERAYVLV 411

Query: 410 -----------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                      LRH+   VG  SV++  L +  +    F+F  +    + N   Y+ YAY
Sbjct: 412 KEKNQDMPEDELRHIAAVVGIASVKYADLSKNRTSDYVFNFDSML-SFEGNTAPYLLYAY 470

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R  SIF++AK     +D D   +++    S  D  E  L   + ++  +I+  T    P
Sbjct: 471 TRVASIFKKAK-----IDMDSITQDI----SFTDEKEKDLANKIMQFNEIIKQVTKQGMP 521

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + L  YL++LA +F   +           + A        RL+L    A  +  GL+++G
Sbjct: 522 HFLCSYLFELAGLFSSFYEA------CPILSAPTEAQKQSRLKLAALTAKTLKQGLSLLG 575

Query: 579 VESPNEM 585
           + +   M
Sbjct: 576 INTLERM 582


>gi|289581095|ref|YP_003479561.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530648|gb|ADD04999.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 600

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 153/620 (24%), Positives = 255/620 (41%), Gaps = 108/620 (17%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-F 88
           D + IE P +     L+++ A  L+   G  P  +A  +   I  D       +  +G +
Sbjct: 25  DDLGIEEPPEDVESVLASSVAFRLAGEAGAAPPQVAGQLADEIDTDELTYVAVVQTQGPY 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   S +YL   L +   +  +YG +L  +   V +E  SANPTGP+HVG  R  ++GD
Sbjct: 85  LNFLPSDAYLATTLET--ATEADYG-HLDDREESVVVEHTSANPTGPVHVGRARNPIIGD 141

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN----------DSDLPE 198
            +A+L+  +GY+V R YY+NDAG QI T      W Y+     +          + DL  
Sbjct: 142 AVANLLDAAGYDVERHYYVNDAGRQIATFT----WAYETFDEEDLEDEPERDRIEYDLVR 197

Query: 199 GYYPGVYLKHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            Y  G      G E          +     L    EE +  + +   V  ++  + + L 
Sbjct: 198 YYRKGNAFLEDGPEDEVEDAEAEIEAIMQGLEEGNEEAYDRVSE--VVDQVLGGMTECLA 255

Query: 251 ALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            L  + D F+ E  F R GD   + D +  L     VYE                D  QL
Sbjct: 256 RLPAEFDEFVKETQFMRNGDTDALVDRLQELDEA--VYED---------------DAWQL 298

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                  G D +   L+SDG+  Y   DLA+ + K+E  +D  + V+G DH     +L  
Sbjct: 299 ELDDH--GIDKNLVFLRSDGTTLYTTRDLAHHEWKFEN-YDRAVTVLGEDHKLQADQLGQ 355

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
               +     Q+  ++   V L      + MS R G  + L  ++DE             
Sbjct: 356 TLELLGNDTDQLENVIFSWVNL---PGGLGMSTRKGTGVDLDDLLDEAIDRAREEVEDRL 412

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQ 455
                               VG  +VR+ ++ ++ ++ + F++ +  + +++  P  YVQ
Sbjct: 413 DDRIRDDDLDEEDIERIAHQVGIGAVRYDIVSKQATKAITFEWDQALDFEAQSAP--YVQ 470

Query: 456 YAYARCRSIFRQ----------AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y +ARC  I  +          A      LD D    +++   +E D     L+  +A +
Sbjct: 471 YVHARCCGILEEAGFDPTEPLAAAGQAESLDLDAIDADLLETPAEQD-----LLETIARF 525

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V++ A    EP+++A Y  +    F+  +   RE P L      + ++   RL LV A
Sbjct: 526 PAVVDEAASDLEPHQIATYTREFGDRFNTFY---RECPVL--ADDVDPEVRETRLALVAA 580

Query: 566 VASIINSGLNIIGVESPNEM 585
               I + L+++GV +P  M
Sbjct: 581 SKHTIANALSVLGVAAPRSM 600


>gi|227513564|ref|ZP_03943613.1| arginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083437|gb|EEI18749.1| arginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 568

 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 264/591 (44%), Gaps = 94/591 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E+P+  + G L+   A  L++     P  IA  +V+  KID        A   +IN +L
Sbjct: 33  LEQPKSLSMGDLAF-PAFSLAKVFHKAPNQIAADLVS--KIDQTSYEKVEAKGAYINFFL 89

Query: 94  SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +  ++L++I+  G  YG+N  GKG  V I+  S N   P+ +GH R  V+G+++A 
Sbjct: 90  DKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 149

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +GY   ++ ++ D G Q   L ++    Y++  + N+ D+ +     +   +V   
Sbjct: 150 LLVKNGYHPIKDNHLGDWGTQFGKLIVA----YKK--WGNEDDVKKDPINNLVKYYVKFH 203

Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             DK   EL +   E  K L    +   +      R  L++ N  +D      D   G+ 
Sbjct: 204 KEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVSLESFNKIYDKLGVTFDTFNGEA 263

Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LL 325
                + + I  L  +G + E       S+  Q   +D+ +L             P  +L
Sbjct: 264 FYNDKMDEGIQILKEKGLLVE-------SQGAQVVKLDKYKL------------NPALIL 304

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   D+A   Y    Y+   +  +YV+GS+ + Y K+L+AV   +  + A+ N
Sbjct: 305 KSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGSEQTYYFKQLKAVLLEMGLQSAE-N 361

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EV 417
           +       +  +G   K+S R+G  I L  V+D                         EV
Sbjct: 362 LHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAINLAKKQIEAKNPDLEDKDEVAKEV 419

Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           G  ++ F  L  KN    + DF    ++K + +  P  YVQY++AR  SI ++A  I   
Sbjct: 420 GVGAIIFGDL--KNERTNNIDFVLEDQLKFEGETGP--YVQYSHARAESILKKASSI--- 472

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            DF    + +       D +  + +  L E+P V+E+A    EP ++A Y   LA  F+ 
Sbjct: 473 -DFHTTDKELD------DPAAWETVTALNEFPHVVESACKDFEPSEVAKYSLKLAKAFNK 525

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++H +       V   + KL   RL LV +V+ ++   LN++GV++P+ M
Sbjct: 526 YYAHSK-------VLVEDDKLG-ARLALVKSVSIVLKESLNLLGVKAPDAM 568


>gi|256847531|ref|ZP_05552977.1| arginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256716195|gb|EEU31170.1| arginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 563

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 159/597 (26%), Positives = 259/597 (43%), Gaps = 105/597 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IERP+D  +G  +      L++ L   P  IA+ ++A+I      + V +AG  +IN +L
Sbjct: 27  IERPKDSNNGDYAF-PTFFLAKTLHKAPQIIAQELLAKID-QTGFEKVVVAGP-YINFFL 83

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +   IL +I+     YG   +G    V I+  S N   PM +GH R  V+G+ +A+
Sbjct: 84  DKQVVGENILKTILADPENYGSQDLGHLANVAIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG- 210
           ++A  GY   R  ++ D G Q   L A    W  ++ +  +  +  + YY  +  +    
Sbjct: 144 ILAKVGYNPIRINHLGDWGTQFGKLMAAYEMWGNEEEVQQDPINTLQKYYVKINTEADTH 203

Query: 211 ---KELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
               +L  ++   L N   E     KW    +  S++  MKI R     L+I  D +  E
Sbjct: 204 PEYNDLGREWFKNLENGDPEAYRLWKWF---RAESLKRFMKIYR----LLDIDFDSYNGE 256

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             F+    +     ID L +  ++ +      +SK  Q  D+++  L             
Sbjct: 257 -AFYNDKMAE----IDQLLQDKHLLQ------ESKGAQIVDLEKYNL------------N 293

Query: 323 PLL--KSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EK 377
           P L  KSDGS  Y   DL  A F+ K   GF   +YV+G++   +  +L+AV + +    
Sbjct: 294 PALIKKSDGSSLYITRDLSAALFR-KRMYGFAQALYVVGAEQRNHFDQLKAVFSEMGFTW 352

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------- 415
             QI+ +   L+ L  +G   KMS R G+ + L  V++                      
Sbjct: 353 SKQIHYIPFGLMSL--NGK--KMSTRKGNIVQLEDVLNDSIKLARQQIAEKNPELQNADE 408

Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              +VG  +V F  L  + +  +DF     VK + +  P  YVQYA+AR  SI R+A   
Sbjct: 409 VARQVGVGAVIFHDLKNERTNSIDFKLADVVKFEGETGP--YVQYAHARAESILRKAGT- 465

Query: 472 FPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            PD            Q      S      ++  L +Y  VIE A    +P  +  Y   L
Sbjct: 466 -PDF----------AQAESLALSGDEAWGILTRLGQYGEVIERAANEYDPSLVGKYALAL 514

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H       R +  ++ K  M RL LV AV+ ++ S L ++GV++P+EM
Sbjct: 515 AKDFNQYYAH------TRILVDDDEK--MARLALVKAVSEVLKSSLALLGVKAPDEM 563


>gi|254167275|ref|ZP_04874127.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623538|gb|EDY36101.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 550

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 253/565 (44%), Gaps = 87/565 (15%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ +  +P  IA+ I  ++K D   + +   G  ++N ++    L ++    ++SG  +
Sbjct: 41  LAKEMKKNPALIAKDIAEKLK-DEYFEKIEAVGP-YVNFWIHTRKLAELTLQEILSGEIF 98

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                 K  KV +E  SANPTGP+HVG  R +++GD+LA +M   GY+V  +Y++ND G 
Sbjct: 99  K---FQKREKVIVEHTSANPTGPLHVGRTRNSIIGDSLARVMRKYGYDVEVQYFVNDVGK 155

Query: 173 QINTLALSVFWRYQQ-ALYNNDSD-----LPEGYYPGVYLKHVGKELADKYSSELLNFP- 225
           Q+ TL     W  +   +   D+      +P  YY   Y + V K    +   + + +  
Sbjct: 156 QVATL----LWGIKNIKIEEKDTRGDYRYVP--YYQAAY-REVEKNPKIEEEIQEIIWKY 208

Query: 226 ---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              +EK   + + Y V +++K I + LK +NI  D F+ E        +  RD+ D+L  
Sbjct: 209 ERGDEKLRKMAEKY-VGSVLKGIEESLKNINIHFDSFVWESSL----VNRARDVADSL-- 261

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGSYTYFAADLAYF 341
           + Y+ E               +D K+L           DR  L + DG+  Y   D+AY 
Sbjct: 262 KDYLKE---------DDGAFYIDLKELGVEGK------DRLYLFRRDGTTLYPLRDIAYH 306

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
             K E+   N + V+G DH  + + ++ +   ++E   +++ L    V+L    M  +  
Sbjct: 307 LLKGEKARKN-VDVLGEDHKLHFQAIKKIVEILNE-NIEVDALFYSFVKLPEGKMSTRQG 364

Query: 402 K-------------RAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSELLDFDFC 440
           K             R  + I  R    E        +   ++RF +L  +  + + F + 
Sbjct: 365 KVVYLDDLLKEAEARVNEIIKNREYEKEEMEKIRRAIAVGAIRFHILNVQEEKPMTFRWE 424

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
                  E+  F +QY +AR  SI R+  +   +   D       PQ       E++L+ 
Sbjct: 425 DALNFEGESAPF-IQYTHARAASILRKT-NWNGEYSIDYISH---PQ-------EIKLLK 472

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +A+YP ++ENA     PY +A Y Y LAS F+  +   R+ P L+    N R     RL
Sbjct: 473 LMAKYPSMVENAVRRLSPYIMARYAYTLASQFNQFY---RDCPVLK-ADDNTRN---TRL 525

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            +V A   +I   L ++G+E+P +M
Sbjct: 526 AIVKAFKKLIKDVLELLGIEAPEKM 550


>gi|227510555|ref|ZP_03940604.1| arginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190207|gb|EEI70274.1| arginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 568

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 264/591 (44%), Gaps = 94/591 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E+P+  + G L+   A  L++     P  IA  +V+  KID        A   +IN +L
Sbjct: 33  LEQPKSLSMGDLAF-PAFSLAKVFHKAPNQIAADLVS--KIDQTSYEKVEAKGAYINFFL 89

Query: 94  SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +  ++L++I+  G  YG+N  GKG  V I+  S N   P+ +GH R  V+G+++A 
Sbjct: 90  DKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 149

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +GY   ++ ++ D G Q   L ++    Y++  + N+ D+ +     +   +V   
Sbjct: 150 LLVKNGYHPIKDNHLGDWGTQFGKLIVA----YKK--WGNEDDVKKDPINNLVKYYVKFH 203

Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             DK   EL +   E  K L    +   +      R  L++ N  +D      D   G+ 
Sbjct: 204 KEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVSLESFNKIYDKLGVTFDTFNGEA 263

Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LL 325
                + + I  L  +G + E       S+  Q   +D+ +L             P  +L
Sbjct: 264 FYNDKMDEGIQILKDKGLLVE-------SQGAQVVKLDKYKL------------NPALIL 304

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   D+A   Y    Y+   +  +YV+GS+ + Y K+L+AV   +  + A+ N
Sbjct: 305 KSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGSEQTYYFKQLKAVLLEMGLQSAE-N 361

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EV 417
           +       +  +G   K+S R+G  I L  V+D                         EV
Sbjct: 362 LHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAINLAKKQIEAKNPDLEDKDEVAKEV 419

Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           G  ++ F  L  KN    + DF    ++K + +  P  YVQY++AR  SI ++A  I   
Sbjct: 420 GVGAIIFGDL--KNERTNNIDFVLEDQLKFEGETGP--YVQYSHARAESILKKASSI--- 472

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            DF    + +       D +  + +  L E+P V+E+A    EP ++A Y   LA  F+ 
Sbjct: 473 -DFHTTDKELD------DPAAWETVTALNEFPHVVESACKDFEPSEVAKYSLKLAKAFNK 525

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++H +       V   + KL   RL LV +V+ ++   LN++GV++P+ M
Sbjct: 526 YYAHSK-------VLVEDDKLG-ARLALVKSVSIVLKESLNLLGVKAPDAM 568


>gi|198426883|ref|XP_002129614.1| PREDICTED: similar to arginyl-tRNA synthetase [Ciona intestinalis]
          Length = 690

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 252/604 (41%), Gaps = 109/604 (18%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S  L      + P  IAELI+  +     +DS  IAG GFIN+ L+ S+
Sbjct: 135 GDYQCNSAMPISGVLKAQGTKMAPRQIAELILKNLPSSDLIDSCNIAGPGFINIRLNVSF 194

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L++ LS ++V G+    +  G+  KV I++ S N    MHVGH R  ++GD +A+L  + 
Sbjct: 195 LKRALSDVLVHGVRTHHSK-GECGKVVIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYF 253

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G+EV R  ++ D G Q   L                    L  F++  +  +++D +  +
Sbjct: 254 GHEVLRVNHVGDWGTQFGMLIAHLTDMFPNYKEESPPIGDLQAFYKQSKKRFDDDPEFKK 313

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V     G         + +N     W  ++ D S +   ++I D L  +N+   I
Sbjct: 314 RAYSCVVKLQSG-------DPDFIN----AW-KLICDVS-RKEFQVIYDRLGIVNL---I 357

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
              E  +H   P     +I  + +QGYV                  D ++L+F     G 
Sbjct: 358 ERGESFYHNLMPP----VIAEIEKQGYVVV---------------EDGRKLVFPE---GS 395

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFD----NMIYVMGSDHSGYVKRLEAVAAAV 374
                ++KSDG +TY  +DLA   C  +R FD    N+IYV  +  + + K + +VA  +
Sbjct: 396 QFPLTIVKSDGGFTYDTSDLA---CIKQRIFDESGANLIYVTDAGQAAHFKAIYSVARKM 452

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                Q+  +      +       K   R+G+ + L  ++DE        +    ++ EL
Sbjct: 453 GWYDPQVTRVEHVAFGVVLGEDRKKFKTRSGETVRLAALLDEGRKRCEEKLKEKGRDKEL 512

Query: 435 LDFDFCKVKE----------------------------QSKENPVFYVQYAYARCRSIFR 466
              +F   +E                            + + N   Y+ YAY R +SI R
Sbjct: 513 TPEEFKAAQEAVAYGCIKYADLSHNRINDYVFSFDKMLEDRGNTAAYLLYAYTRIKSIAR 572

Query: 467 QAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            AK   +   +     +  + +P E      EL+L   +  +P V++       P+ L  
Sbjct: 573 VAKVSREELKEAASSFYDDDGLPLEH---AKELKLARFITRFPEVLQRVCDDLAPHTLCD 629

Query: 524 YLYDLASVFHGHW--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           YLY+LA+V+   +   +  E  R      +  K+   RL L  A  ++++    I+G++ 
Sbjct: 630 YLYELATVYTEFYDVCYCVEKDR---KTGDVVKIHKHRLLLCDATVAVMDQCFKILGIKP 686

Query: 582 PNEM 585
            ++M
Sbjct: 687 VHKM 690


>gi|55820150|ref|YP_138592.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|81561144|sp|Q5M6I4|SYR_STRT2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55736135|gb|AAV59777.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 563

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 255/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  I  +I    + + V   G  +IN++
Sbjct: 26  LLEIPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINIF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   +L  ++  G  Y    IG G  +  +  S N   P  +GH R  V+ D LA
Sbjct: 83  LDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++A  GY+  R  ++ D G Q   L ++   W  ++A+  N    P      +Y++   
Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   D    E       +W   ++  D    A+ +  RD+ L   N  +D      D + 
Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L ++G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVVDILTKKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYNWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAIA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D            S  D    ++I  L ++PR+I  A+   EP  +A +   LA  F+
Sbjct: 469 SAD---------ATYSLNDVESWEIIKLLQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A+++   L ++GVE+P+EM
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563


>gi|110835103|ref|YP_693962.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123149267|sp|Q0VMA8|SYR_ALCBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110648214|emb|CAL17690.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 584

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 259/591 (43%), Gaps = 76/591 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + I+R RD +HG  +TN A++L++P G+ P  +AE ++A +  D  V  V IAG GFIN 
Sbjct: 30  VQIDRTRDKSHGDFATNIALMLAKPAGMKPRDLAEKLIAALPNDSAVAKVDIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +  +L  +L S +      G +   +   V +++ S N    MHVGH R  ++GD + 
Sbjct: 90  FQADDWLTGLLDSALADDF-LGISRPEQPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             + F G+ V R+ ++ D G Q   L   + +  +Q     + +L              K
Sbjct: 149 RTLEFLGHTVIRQNHVGDWGTQFGML---LAYLEEQKTEEGERELSRELANLETFYRAAK 205

Query: 212 ELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISED 263
           +  D+  S    F +     +VK     DY +    +  +  L      +D   + ++  
Sbjct: 206 QRFDESDS----FADRARALVVKLQSGDDYCLTLWAEFNQVSLSHCQAIYDRLGVSLTPA 261

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D H G+ +    +  ++ +L  +G + E       S+  Q   MD     F++   G+ +
Sbjct: 262 DVH-GESAYNDDLAQVVADLDSKGLLSE-------SQGAQCVFMD----AFKNKE-GEPL 308

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKR---LEAVAAAVSE 376
              + K+DG Y Y  +DLA  + +      D M+Y +    + + ++   L  +A  V E
Sbjct: 309 PVIVRKADGGYLYATSDLAALRYRASTLRADRMLYFVDQRQALHFQQMFTLAKLAGFVPE 368

Query: 377 KKAQINVLLCEL----VRLY--RDGMPIKM-------SKRAGDFIT----------LRHV 413
           +    ++    +     R +  RDG  +K+        +RA   +           LR++
Sbjct: 369 QTELAHMGFGTMNGPDGRPFKTRDGGTVKLVDLLDEAEQRAFALVQEKNPQLDDEELRNI 428

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  S    F+F ++    + N   Y+ YAY R  S+FR+A     
Sbjct: 429 ARSVGIGAVKYADLSKNRSSDYIFNFEQML-SFEGNTAPYLLYAYTRVASVFRKA----- 482

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +LD      + +  E     +E  L   L ++  V++N     +P+ L+ YLYD+A +F 
Sbjct: 483 ELDMANVSGDFLLNED----AEHTLAARLVQFGEVLQNVADKGQPHLLSAYLYDVAGLFS 538

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             + H         + + + ++   RL+L    A  +  G+ ++G+ SP E
Sbjct: 539 SFYEH------CPILSSEDERIRQSRLKLAALTARTLKHGMELLGL-SPLE 582


>gi|312277462|gb|ADQ62119.1| Arginyl-tRNA synthetase, putative [Streptococcus thermophilus ND03]
          Length = 563

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 254/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  I  +I    + + V   G  +IN++
Sbjct: 26  LLETPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINIF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   +L  ++  G  Y    IG G  +  +  S N   P  +GH R  V+ D LA
Sbjct: 83  LDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++A  GY+  R  ++ D G Q   L ++   W  ++A+  N    P      +Y++   
Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   D    E       +W   ++  D    A+ +  RD+ L   N  +D      D + 
Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYNWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAIA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D            S  D    ++I  L ++PR+I  A+   EP  +A +   LA  F+
Sbjct: 469 SADATY---------SLNDVESWEIIKLLQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A+++   L ++GVE+P+EM
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563


>gi|320547653|ref|ZP_08041938.1| arginine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447728|gb|EFW88486.1| arginine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 563

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 153/619 (24%), Positives = 275/619 (44%), Gaps = 104/619 (16%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           + R++  + E+D     +++I++  ++E P++   G L+   A  L+R L   P  IA  
Sbjct: 8   AERIQTIVPELD-----QEQIVN--LLEIPKNSDMGDLAF-PAFSLARILRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I    K+D        A   +IN +L    +   +L  ++ +G +Y    +G+G  V I+
Sbjct: 60  IAE--KLDKTGFEKIEAVGPYINFFLDKKSISADVLGKVIANGSDYASQDLGQGRNVAID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIGDSLANIFEKIGYKAVKINHLGDWGKQFGMLIVAYKKWGD 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++A+  +  D     Y  +  +   K   D+ + E     E        D    ++ +  
Sbjct: 178 EEAVKAHPIDELLKLYVRINAEAETKPELDEEAREWFRKLE------AGDEEAISLWQWF 231

Query: 246 RDD-LKALN-IQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           RD+ L   N + +++ +S D F+ G+      + +++D L  +G + E       S+  Q
Sbjct: 232 RDESLVEFNRLYNELGVSFDSFN-GEAFYNDKMDEVVDILTEKGLLEE-------SQGAQ 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYV 355
             ++++             ++ P L  KSDG+  Y   DLA   Y K  Y+  F   IYV
Sbjct: 284 VVNLEKY-----------GIEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYV 330

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G++ S + K+L+AV   +  K  + ++       + ++G   K+S R G+ I L   + 
Sbjct: 331 VGNEQSAHFKQLKAVLNEMDFKWNE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIA 387

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKEN 449
           E                         VG  +++F  L        DFD    V  + +  
Sbjct: 388 EAVKRAEDQINAKNPNLANKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGETG 447

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P  YVQY +AR +SI R+A +  P ++ D++  N        D    ++I  + ++PR+I
Sbjct: 448 P--YVQYTHARIQSILRKA-EFTPSVN-DVYSLN--------DAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAV 566
           + A    EP  +A +   LA  F+ +++H R   ENP               RL L +A 
Sbjct: 496 KRAADNFEPSIIAKFAISLAQSFNKYYAHTRILDENPERD-----------SRLALSYAT 544

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+++   L ++GVE+PNEM
Sbjct: 545 ATVLKEALRLLGVETPNEM 563


>gi|305663765|ref|YP_003860053.1| arginyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378334|gb|ADM28173.1| arginyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 640

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 249/574 (43%), Gaps = 98/574 (17%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N++L  +   +++ + +VSG E YG  +  K  +V IE+VSANP  P+H+G  R AV+
Sbjct: 79  YVNMFLDRTRFTELVFNSIVSGEENYGIFIDDKPRRVVIEYVSANPIHPLHIGAARNAVL 138

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF------------------------ 182
           GD LA +   +G  V   +YIND G Q+  LAL +                         
Sbjct: 139 GDFLARIHRKTGNTVQTRFYINDVGRQVALLALGIMKLGSIDIPNDVKPDHWLGTVYAIT 198

Query: 183 ------WRYQQALYNND--------SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--- 225
                 +  ++ L N           +L +       L+ +  E+ DK S EL N     
Sbjct: 199 NTIAEIYTLKKRLENTGDIERKELVKELDQLLIDASKLREIAPEIFDKISEELKNIDIEQ 258

Query: 226 -----------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       E+W+  +   +V+  +K  ++ L  L I+ +I+  E D        + 
Sbjct: 259 EISKIMRSYERGEEWIKNIIRKTVELCIKGFKETLSRLGIEIEIWDWESDLVWS--KEVD 316

Query: 275 DIIDNLAR--QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDG 329
            +ID L +  +  V++G      ++  +  ++ R+        + ++++ P L   +SDG
Sbjct: 317 KLIDELKKRPETIVHKGAYALDFTEILKDTEIRRR------LRIPENLEIPPLIFQRSDG 370

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  Y   D+ Y   K+ E   D +I V+ S+ +    ++      +  +K   N+L    
Sbjct: 371 TTLYTVRDIVYTLKKFREFNADQVINVIASEQTLPQAQIRLALYLLGYRKEAENLLHYSY 430

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------VGSDSVRFMM 426
             +  +GM  KMS R G  ITL  +++E                      +G  +++F +
Sbjct: 431 EIVNVEGM--KMSSRRGRIITLDSIIEEAKIRALAELEKRGNRSEELAEKIGIAAIKFYL 488

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L    S  + F +  V    + N   Y+ Y YAR   IFR+A++   +L++         
Sbjct: 489 LSVTPSRPVKFAWESVLNFER-NSAPYLLYTYARVEGIFRKAREKGIELNWKELLSQADL 547

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             +E  +   +LI ++AEYP + +   +  +P  LA Y+  LA  F+  +    E P   
Sbjct: 548 GFAENHSRRWRLIKYIAEYPDIFKKTYLELDPSILATYILRLADEFNSWYD---EEP--- 601

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            V   + ++   +L LV+++ +++ + L I+G+E
Sbjct: 602 IVLEQDPRVRASKLLLVYSIRTVLRNALEILGIE 635


>gi|55822038|ref|YP_140479.1| arginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627012|ref|YP_819631.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|81559968|sp|Q5M1Z3|SYR_STRT1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122268383|sp|Q03MY7|SYR_STRTD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55738023|gb|AAV61664.1| arginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116100289|gb|ABJ65435.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 563

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 254/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  I  +I    + + V   G  +IN++
Sbjct: 26  LLEIPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINIF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   +L  ++  G  Y    IG G  +  +  S N   P  +GH R  V+ D LA
Sbjct: 83  LDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++A  GY+  R  ++ D G Q   L ++   W  ++A+  N    P      +Y++   
Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   D    E       +W   ++  D    A+ +  RD+ L   N  +D      D + 
Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYNWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAIA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D            S  D    ++I  L ++PR+I  A+   EP  +A +   LA  F+
Sbjct: 469 SAD---------ATYSLNDVESWEIIKLLQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A+++   L ++GVE+P+EM
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563


>gi|90961654|ref|YP_535570.1| arginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123391360|sp|Q1WU48|SYR_LACS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|90820848|gb|ABD99487.1| Arginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|300214459|gb|ADJ78875.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 563

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 256/590 (43%), Gaps = 92/590 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE+P+    G  +   A +LS+ L   P  IA  +V +I      + V   G  ++N +L
Sbjct: 28  IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIASELVEKID-QTGFEKVEAVGP-YVNFFL 84

Query: 94  SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
                 K ILS ++  G  YG   +G G  V I+  S N   PM +GH R  V+G++LA 
Sbjct: 85  DKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLAL 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           L+    Y+  +  ++ D G Q   L ++   W  ++ +  +  +    YY   + + V  
Sbjct: 145 LLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNN 204

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              D+ + E    L   +E+ L + K +  +++ K   +    LNI  D +  E  ++  
Sbjct: 205 PELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFT-EVYDRLNITFDSYNGEAFYN-- 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326
               + +I D L  +G + E       S+  +  D+++  L             P L  K
Sbjct: 262 --DKMDEITDLLQEKGLLKE-------SQGAEIVDLEKYDL------------NPALIRK 300

Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINV 383
           +DG+  Y   DLA    +Y R +D    +YV+G + + + K+L+AV   +  +    I+ 
Sbjct: 301 TDGATLYITRDLAAALYRY-RTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHH 359

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
           +   L+         K+S R+G  I L  V+D+                         VG
Sbjct: 360 IPFGLIT----SGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             +V F  L  KN  +  FDF     V+ + +  P  YVQY++AR  SI R+A D+  +L
Sbjct: 416 VGAVVFHDL--KNERINSFDFNLDEVVRFEGETGP--YVQYSHARAMSILRKAGDL--EL 469

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D D    +        D    Q +  LA +P  ++ A    EP  +A Y   LA  F+ +
Sbjct: 470 DSDNLEIS--------DPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H R          N+      RL LV +VA+ +   L ++GV++PNEM
Sbjct: 522 YAHSR--------ILNDDAEKNARLALVQSVATTLKESLRLLGVKAPNEM 563


>gi|85059226|ref|YP_454928.1| arginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|109895037|sp|Q2NTK2|SYR_SODGM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|84779746|dbj|BAE74523.1| arginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 576

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 247/605 (40%), Gaps = 127/605 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LGL P  +AE +V  + +D     V IAG GFIN++L PS+L   L
Sbjct: 37  GDYQANGVMAIAKQLGLPPRKLAENVVGLLNLDGIARKVDIAGPGFINIFLEPSWLANHL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++  +S    G   +   T V +++ + N    MHVGH R  ++GD     ++F G+ V 
Sbjct: 97  AA-ALSSPRLGIASVASQTIV-VDYSAPNVAKEMHVGHVRSTIIGDASVRTLSFLGHNVI 154

Query: 163 REYYINDAGAQINTL------------------ALSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                  +L  F+R  +  Y+ D    E    G 
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKVQDGGEAEMQLSSLESFYRAAKQHYDEDPAFAE-RARGY 213

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHD 257
            +K  G    D+Y  ++       W  +V     Q         + + R D+   ++ +D
Sbjct: 214 VVKLQG---GDEYCRQM-------WRKLVDVTMAQNQKTYNRLNVTLTRADVMGESLYND 263

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +              +  I+ +L  +G   E       S+      +D     F++   G
Sbjct: 264 M--------------LPGIVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-G 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369
           + +   + K DG+Y Y   D+A  K +YE    D +IY + S    +       V++   
Sbjct: 298 EPMGVIIQKKDGAYLYTTTDIACAKYRYETLKADRIIYYIDSRQHQHLMLAWTIVRKAGY 357

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           V  +V  +     ++L       +DG P K   RAG  I L  ++DE             
Sbjct: 358 VPESVPLEHHMFGMMLG------KDGKPFK--TRAGGTIKLTELLDEALERARRLVAAKN 409

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  
Sbjct: 410 PSMDAGELARLAQVVGIGAVKYADLSKSRTTDYVFDWDNMLS-FEGNTAPYMQYAYTRVA 468

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYK 520
           SIF+++      L  D      I  E+E +T   QL V L +    I  AT+A++  P+ 
Sbjct: 469 SIFKRSGQDEQQLTGD------IRLEAEQET---QLAVRLLQLEEAI--ATVARDGTPHV 517

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YLYDLA +F   + H         + A N  L   RLQL    A  +  GL+++G+E
Sbjct: 518 LCAYLYDLAVLFSAFYEH------CPILNAENAALRQSRLQLALLTARTLKKGLDLLGIE 571

Query: 581 SPNEM 585
           +   M
Sbjct: 572 TVERM 576


>gi|227890742|ref|ZP_04008547.1| arginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867680|gb|EEJ75101.1| arginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 575

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 256/590 (43%), Gaps = 92/590 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE+P+    G  +   A +LS+ L   P  IA  +V +I      + V   G  ++N +L
Sbjct: 40  IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIASELVEKID-QTGFEKVEAVGP-YVNFFL 96

Query: 94  SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
                 K ILS ++  G  YG   +G G  V I+  S N   PM +GH R  V+G++LA 
Sbjct: 97  DKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLAL 156

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           L+    Y+  +  ++ D G Q   L ++   W  ++ +  +  +    YY   + + V  
Sbjct: 157 LLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNN 216

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              D+ + E    L   +E+ L + K +  +++ K   +    LNI  D +  E  ++  
Sbjct: 217 PELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFT-EVYDRLNITFDSYNGEAFYN-- 273

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326
               + +I D L  +G + E       S+  +  D+++  L             P L  K
Sbjct: 274 --DKMDEITDLLQEKGLLKE-------SQGAEIVDLEKYDL------------NPALIRK 312

Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINV 383
           +DG+  Y   DLA    +Y R +D    +YV+G + + + K+L+AV   +  +    I+ 
Sbjct: 313 TDGATLYITRDLAAALYRY-RTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHH 371

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
           +   L+         K+S R+G  I L  V+D+                         VG
Sbjct: 372 IPFGLIT----SGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVG 427

Query: 419 SDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             +V F  L  KN  +  FDF     V+ + +  P  YVQY++AR  SI R+A D+  +L
Sbjct: 428 VGAVVFHDL--KNERINSFDFNLDEVVRFEGETGP--YVQYSHARAMSILRKAGDL--EL 481

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D D    +        D    Q +  LA +P  ++ A    EP  +A Y   LA  F+ +
Sbjct: 482 DSDNLEIS--------DPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKY 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H R          N+      RL LV +VA+ +   L ++GV++PNEM
Sbjct: 534 YAHSR--------ILNDDAEKNARLTLVQSVATTLKESLRLLGVKAPNEM 575


>gi|317491773|ref|ZP_07950208.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920207|gb|EFV41531.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 576

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 248/577 (42%), Gaps = 71/577 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG+ P  +AE ++  +++D    +V IAG GFIN++L P++L K +
Sbjct: 37  GDYQANGVMGAAKKLGIAPRQLAEQVLTHLELDGIASNVEIAGPGFINIFLDPAWLAKQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             + ++    G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  -EMALADERLGVAAVKPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + N+ DL   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHANEMDLSDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIID 278
              F E     +VK   +Q   +  R+  + L    DI +S++  ++ R + +  +D + 
Sbjct: 203 DAEFAERARAYVVK---LQGGDEYCREMWRKLV---DITMSQNQKNYQRLNVTLTKDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y  
Sbjct: 257 GESLYNSMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE  G D ++Y + S    +       V++   V  +VS +     ++L +
Sbjct: 316 TDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGK 375

Query: 388 LVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVRFMMLW 428
             + +  R G  IK+S       +RAG  I           L  +V+ VG  +V++  L 
Sbjct: 376 DGKPFKTRSGGTIKLSDLLDEAVERAGKLIAEKNPDLSGDELAKLVEVVGIGAVKYADLS 435

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +  +    FD+  +    + N   Y+QYAY R  SIF++A      +D      N++  E
Sbjct: 436 KSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVSSIFKRA-----GIDEQSLSGNIVLTE 489

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                 E  L   L ++   I        P+ +  YLYDLA +F   +           +
Sbjct: 490 DR----EKALAARLIQFEETITQVAREGTPHVMCTYLYDLAGLFSSFYE------ACPIL 539

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            A + +    RLQL    A  + +GL+ +G+E+   M
Sbjct: 540 TAESEEQRNSRLQLAALTARTLKTGLDTLGIETVERM 576


>gi|164687639|ref|ZP_02211667.1| hypothetical protein CLOBAR_01281 [Clostridium bartlettii DSM
           16795]
 gi|164603413|gb|EDQ96878.1| hypothetical protein CLOBAR_01281 [Clostridium bartlettii DSM
           16795]
          Length = 566

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 158/625 (25%), Positives = 268/625 (42%), Gaps = 106/625 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           DF   + N LKE     K+E   L+ IV  IE P +   G  +      L++     P  
Sbjct: 3   DFKIAIANCLKE-----KIEDLTLEEIVALIEVPPNKEMGDFAF-PCFKLAKVFRKAPNM 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTK 122
           IA  +   I+    +  V   G G++N +++ S L + +++ ++    +YG   +G+   
Sbjct: 57  IAADLAENIEAKGAISKVMPLG-GYVNFFVNKSQLAETVINDVLTKKEKYGHTDLGQDKA 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           V I+F S N   P H+GH R  V+G+ L  +    GY V R  ++ D G Q   L ++  
Sbjct: 116 VVIDFSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYNVVRVNHLGDYGTQFGKLIVAFK 175

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVK-- 234
            W  ++A+  N   +PE       LK     L  K+  E    PE       W   ++  
Sbjct: 176 LWGSKEAVEAN--PIPE------LLK-----LYVKFHEEAEQKPEMEDEARAWFTKLENG 222

Query: 235 DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGI 290
           D   +A+ +  RD+ LK     +D+   E D + G+      +  +ID L  +G + +  
Sbjct: 223 DEEAKALWQWFRDESLKEFARVYDLLDIEFDSYAGESFYSDKMGVVIDQLKEKGLLVQ-- 280

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKY 345
                S+ T   D+++  +             P L  K+DGS  Y   DLA   Y K  Y
Sbjct: 281 -----SQGTNVVDLEQYNM------------PPALITKNDGSTLYMTRDLAAAIYRKNTY 323

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQIN 382
           +  FD  IYV+GS  S + ++L  V                          +S +K ++ 
Sbjct: 324 D--FDKCIYVVGSQQSLHFQQLFKVLELMGYEWSKDLIHVPFGMVALEEGTMSTRKGRVV 381

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            L   L +       I +SK   +   +  +  +VG  +V F  L   NS + D+ F   
Sbjct: 382 FLEDVLKQAVEKTKEIVLSKNP-NAKNVEQIAKQVGVGAVVFQEL--SNSRIKDYTFSWS 438

Query: 443 KEQSKENPVF-YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +  S E     YVQY +ARC ++ R+A +++  D+++DL         SE D +E+  ++
Sbjct: 439 RTLSFEGETGPYVQYTHARCCAVLRKAEEEVTADINYDLL--------SEGDGAEVLKVI 490

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
               + + I  A    EP+ +  ++ DLA  F+  +    +NP L     ++ ++   RL
Sbjct: 491 --GSFNKAILAAMRKNEPHIITRFVLDLAQAFNKFY---HDNPIL----VDDVEVRKARL 541

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            LV A    I + L ++G+ +P  M
Sbjct: 542 ALVAATRQTIENALALLGMHAPERM 566


>gi|50302751|ref|XP_451312.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640443|emb|CAH02900.1| KLLA0A07040p [Kluyveromyces lactis]
          Length = 649

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 251/581 (43%), Gaps = 96/581 (16%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIE 111
           L R  G++P  IAE    +      ++ V   G  F+  +  P +L KI L  I+    +
Sbjct: 117 LVRKKGINPKEIAEEWATKFPCGDYLEKVEANGP-FVQFFFKPEFLFKIVLPDILTRKEK 175

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G   K+ IEF S N   P H GH R  ++G  L++L    G++VTR  Y+ D G
Sbjct: 176 YGSSPLGGNKKILIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEQLGWDVTRINYLGDWG 235

Query: 172 AQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK------HVGKELADKYSSE--- 220
            Q   LA+  F RY  ++AL N+    P  +   VY++      + G  L+++ S++   
Sbjct: 236 KQFGVLAVG-FERYGDEEALRND----PINHLFEVYVRINKDIENEGDTLSEEESTDGKA 290

Query: 221 -----LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                 +   + + L I K +   ++ K I+   + LNI++D++        G+    ++
Sbjct: 291 RSYFKKMEDGDPEALKIWKRFRELSIEKYIKTYAR-LNIKYDVY-------SGESQVSKE 342

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYF 334
            +D   R   ++E      K+ T +    DR   L   T     + + ++ KSDG+  Y 
Sbjct: 343 QMDKAMR---MFED-----KNLTHE----DRGATLIDLTKFNKKLGKTIVQKSDGTTLYL 390

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYV---------------KRLEAV----AAAV 374
             D+     +YE+  FD MIYV+      +V                RL+ V       +
Sbjct: 391 TRDVGAAMDRYEKYHFDQMIYVIACQQDLHVAQFFEILKQLGFEWANRLQHVNFGMVQGM 450

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKN 431
           S +K  + V L  ++   ++ M   M K    +  + +   V D VG  +V    +  K 
Sbjct: 451 STRKGTV-VFLDNILEETKEKMHEVMRKNETKYAQIENPDEVADLVGISAVMIQDMQAKR 509

Query: 432 SELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPD----LDFDLF--PRNV 484
               +F + ++   +    P  Y+QYA++R RS+ R A DI PD     DF L   P  V
Sbjct: 510 INNYEFKWERMTSFEGDTGP--YLQYAHSRLRSVERNASDITPDQWVSADFSLLHEPAAV 567

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I            L+  LA+YP V+ NA    EP  +  YL+ L       +        
Sbjct: 568 I------------LVRLLAQYPDVLRNAIKTHEPSTVVTYLFKLTHQVSSCYD------- 608

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +V     +L   RL L  A   ++N+G+ ++G+   + M
Sbjct: 609 VLWVAGQTPELAAARLALYGAARQVLNNGMRLLGLTPVDRM 649


>gi|15802288|ref|NP_288313.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|12515938|gb|AAG56866.1|AE005410_2 arginine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 577

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 249/587 (42%), Gaps = 90/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y     KH  +     E 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209

Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           A  Y  +L +  E   E W  +V     Q   +I  D L  + + HD  + E  ++   P
Sbjct: 210 ARNYVVKLQSGDEYFREMWRKLVDITMTQN--QITYDRLN-VTLTHDDVMGESLYNPMLP 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                I+ +L  +G   E       S+      +D     F++   G+ +   + K DG 
Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIXKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +  
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + 
Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQ 480

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L    VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H
Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEXTLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|74311774|ref|YP_310193.1| arginyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|109895036|sp|Q3Z2Q4|SYR_SHISS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|73855251|gb|AAZ87958.1| arginine tRNA synthetase [Shigella sonnei Ss046]
 gi|323165334|gb|EFZ51122.1| arginyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 578

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 247/579 (42%), Gaps = 73/579 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMTPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   + W  +Q   N   ++      G Y        A K+  E  
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGDEMELADLEGFYRD------AKKHYDEDE 205

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNL 280
            F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD +   
Sbjct: 206 EFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVMGE 259

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAAD 337
           +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y   D
Sbjct: 260 SLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTD 318

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYR 393
           +A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   +  L +
Sbjct: 319 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM--LGK 376

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG P K   RAG  + L  ++DE                           VG  +V++  
Sbjct: 377 DGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYAD 434

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L    VI 
Sbjct: 435 LSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAAPVII 489

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +E      E QL   L ++   +        P+ +  YLYDLA +F G + H        
Sbjct: 490 REDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH------CP 539

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 540 ILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 578


>gi|15831840|ref|NP_310613.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747906|ref|ZP_02772928.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757913|ref|ZP_02782920.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168770862|ref|ZP_02795869.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776574|ref|ZP_02801581.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783179|ref|ZP_02808186.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789744|ref|ZP_02814751.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801885|ref|ZP_02826892.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939580|ref|ZP_03084962.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208810380|ref|ZP_03252256.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816722|ref|ZP_03257842.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208818546|ref|ZP_03258866.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209395919|ref|YP_002270960.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|254793500|ref|YP_003078337.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227623|ref|ZP_05941904.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258211|ref|ZP_05950744.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|21542249|sp|Q8XCH2|SYR_ECO57 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238065087|sp|B5YR22|SYR_ECO5E RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13362054|dbj|BAB36009.1| arginine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768070|gb|EDU31914.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017552|gb|EDU55674.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999443|gb|EDU68429.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355181|gb|EDU73600.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360270|gb|EDU78689.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189370702|gb|EDU89118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376028|gb|EDU94444.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208724896|gb|EDZ74603.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731065|gb|EDZ79754.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738669|gb|EDZ86351.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209157319|gb|ACI34752.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209767330|gb|ACI81977.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767332|gb|ACI81978.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767336|gb|ACI81980.1| arginine tRNA synthetase [Escherichia coli]
 gi|254592900|gb|ACT72261.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|320188575|gb|EFW63237.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320641730|gb|EFX11118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|326342254|gb|EGD66035.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343804|gb|EGD67566.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 577

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 249/587 (42%), Gaps = 90/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y     KH  +     E 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209

Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           A  Y  +L +  E   E W  +V     Q   +I  D L  + + HD  + E  ++   P
Sbjct: 210 ARNYVVKLQSGDEYFREMWRKLVDITMTQN--QITYDRLN-VTLTHDDVMGESLYNPMLP 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                I+ +L  +G   E       S+      +D     F++   G+ +   + K DG 
Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +  
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + 
Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQ 480

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L    VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H
Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|227524707|ref|ZP_03954756.1| arginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088191|gb|EEI23503.1| arginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 568

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 151/591 (25%), Positives = 262/591 (44%), Gaps = 94/591 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + +P+  + G L+   A  L++     P  IA  +V+  KID        A   +IN +L
Sbjct: 33  LAQPKSLSMGDLAF-PAFSLAKVFHKAPNQIAADLVS--KIDQTSYEKVEAKGAYINFFL 89

Query: 94  SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +  ++L++I+  G  YG+N  GKG  V I+  S N   P+ +GH R  V+G+++A 
Sbjct: 90  DKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 149

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L+  +GY   ++ ++ D G Q   L ++    Y++  + N+ D+       +   +V   
Sbjct: 150 LLVKNGYHPIKDNHLGDWGTQFGKLIVA----YKK--WGNEDDVKRDPINNLVKYYVKFH 203

Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             DK   EL +   E  K L    +   +      R  L++ N  +D      D   G+ 
Sbjct: 204 KEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVSLESFNKIYDKLGVTFDTFNGEA 263

Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LL 325
                + + I  L  +G + E       S+  Q   +D+ +L             P  +L
Sbjct: 264 FYNDKMDEGIQILKDKGLLVE-------SQGAQVVKLDKYKL------------NPALIL 304

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   D+A   Y    Y+   +  +YV+GS+ + Y K+L+AV   +  + A+ N
Sbjct: 305 KSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGSEQTYYFKQLKAVLLEMGLQSAE-N 361

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EV 417
           +       +  +G   K+S R+G  I L  V+D                         EV
Sbjct: 362 LHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAINLAKKQIEAKNPDLEDKDEVAKEV 419

Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           G  ++ F  L  KN    + DF    ++K + +  P  YVQY++AR  SI ++A  I   
Sbjct: 420 GVGAIIFGDL--KNERTNNIDFVLEDQLKFEGETGP--YVQYSHARAESILKKASSI--- 472

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            DF    + +       D +  + +  L E+P V+E+A    EP ++A Y   LA  F+ 
Sbjct: 473 -DFHTTDKELD------DPAAWETVTALNEFPHVVESACKDFEPSEVAKYSLKLAKAFNK 525

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++H +       V   + KL   RL LV +V+ ++   LN++GV++P+ M
Sbjct: 526 YYAHSK-------VLVEDDKLG-ARLALVKSVSIVLKESLNLLGVKAPDAM 568


>gi|18314006|ref|NP_560673.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|23822198|sp|Q8ZTA8|SYR_PYRAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18161582|gb|AAL64855.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 630

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 251/572 (43%), Gaps = 119/572 (20%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  ++V  G +YG           +E  SANP  P+H+GH R A++GD+LA L+ F G +
Sbjct: 91  VFEAVVKMGRKYGFTEECVTGSYLVEHTSANPVHPLHIGHGRNAILGDSLARLLKFCGNK 150

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV----------- 209
           V   +Y++D G Q+   A+        A+ +      E   P V + HV           
Sbjct: 151 VETHFYVDDCGVQVMYAAMGY-----NAVKDEVKKRIEKSKPDVVIGHVYSATNAVAEIG 205

Query: 210 --GKELA----DKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFIS 261
              KEL     D+   E+L   +E W+ ++K    S   ++  I ++L   ++ ++    
Sbjct: 206 RLKKELEKAQDDERKREILREIDE-WVAVLKRLMDSEGDIISKIAEELGRRDLLNEAVEL 264

Query: 262 EDDFHRGDPSP---IRDIID--------NLARQG-----YVYEG-----------ILPPP 294
              +  GDP     +R+++D         LAR G     + YE            I+   
Sbjct: 265 NRRYESGDPEAKGVVREVVDLVLKGQRETLARLGVEIDKWDYESELTVWSSEAMRIVSEL 324

Query: 295 KSKTTQKCDMDRKQLLFRSTM------VGDDVDRP-------LLKSDGSYTYFAADLAYF 341
           + +  Q  ++    ++FR+        + D +D P       L +SDG+  Y   D+AY 
Sbjct: 325 QKRWPQYIEIKGGAVVFRADKFVQDYNLWDVLDLPRFIPPVTLTRSDGTTLYVTRDVAYA 384

Query: 342 KCKYERGFDNMIYVMGSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             +  +GFD +I V+ ++ +    +V+ +      V E K  ++    E+V L   GM  
Sbjct: 385 LWQARQGFDKVIRVISTEQTHEQAHVRIILYALGYVDEAKKIVH-YAYEMVNL--PGM-- 439

Query: 399 KMSKRAGDFITLRHVVDE-----------------------VGSDSVRFMMLWRKNSELL 435
           KMS R G +I+L  ++DE                       VG  SVR+  L     + +
Sbjct: 440 KMSARRGQYISLDEILDEAAERSASLVKEKNPEVSGVIAERVGVGSVRYAFLTTSPRKPI 499

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESEFDT 493
           +F +  V    ++N   ++QY Y R  SI  +A +I   P       P N++ +E E   
Sbjct: 500 EFKW-DVVLNLRQNSGTFLQYTYVRAYSILEKAGEIGNVP------VPENMLAEERE--- 549

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
               L++ +AE+P V++ A  +  P  +A YL  LA VF+ ++      P L+  ++   
Sbjct: 550 ----LVLKIAEWPSVVKEAAKSLRPDYVAEYLDGLALVFNSYYEKA---PVLKAEES--- 599

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R+ +V+AV +++ +G  I+G+ +  +M
Sbjct: 600 -VRGFRIAIVNAVKTVLEAGFYILGIPTLTKM 630


>gi|24380431|ref|NP_722386.1| arginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|38372521|sp|Q8DRW2|SYR_STRMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24378457|gb|AAN59692.1|AE015031_8 putative arginyl-tRNA synthase [Streptococcus mutans UA159]
          Length = 563

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 147/601 (24%), Positives = 262/601 (43%), Gaps = 111/601 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+  + G L+      L++ +   P  IA  +V +I  +   + V   G  +IN +
Sbjct: 26  LLEKPKKSSMGDLAF-PTFSLAKTMRKAPQIIASELVGQIN-NSYFEKVEAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ S +  ++L  ++    +Y +  IG+G  + I+  S N   P  +GH R  V+GD L+
Sbjct: 83  LNKSEISAQVLKEVIKKREDYAQAAIGQGHNIVIDLSSPNIAKPFSIGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GYE  +  ++ D G Q   L ++   W  ++A+  +    P      +Y+    
Sbjct: 143 NIFQKLGYETVKINHLGDWGKQFGMLIVAYKKWGSEEAVRAH----PIDELLKIYV---- 194

Query: 211 KELADKYSSELLNFPE-----EKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISE 262
                + ++E  N PE      +W   ++  D    A+ +  RD+ L   N  +     +
Sbjct: 195 -----RINAETKNHPELDEEAREWFRKLENNDEEALALWQWFRDESLMEFNRLYAELGID 249

Query: 263 DDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            D + G+      + +++  LA +G + E       SK  Q  ++++             
Sbjct: 250 FDSYNGEAFYNDKMEEVVQLLAEKGLLEE-------SKGAQVVNLEKY-----------G 291

Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           ++ P L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G + + + K+L+AV A +
Sbjct: 292 IEHPALIKKSDGATLYITRDLAAAIYRKRTYD--FAKAIYVVGQEQTAHFKQLKAVLAEM 349

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
               ++ ++       + ++G   K+S R G+ I L   + E                  
Sbjct: 350 GYAWSK-DIQHVSFGLVTKNGQ--KLSTRKGNVILLEPTIAEAVKRSLAQIDTKNPDLVN 406

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A
Sbjct: 407 KEAVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKA 464

Query: 469 KDIFPDLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                  DF        PQ +E     DT   ++I  + ++P  I  A    EP  +A +
Sbjct: 465 -------DFQ-------PQATENYQLNDTESWEIIKLIQDFPNTIVRAADNFEPSLIARF 510

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              LA  F+ +++H R          +N      RL L +A A+++   L ++GVE+PNE
Sbjct: 511 AIHLAQSFNKYYAHTR--------ILDNSPERDSRLALSYATATVLKEALALLGVEAPNE 562

Query: 585 M 585
           M
Sbjct: 563 M 563


>gi|91211101|ref|YP_541087.1| arginyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117624028|ref|YP_852941.1| arginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218558741|ref|YP_002391654.1| arginyl-tRNA synthetase [Escherichia coli S88]
 gi|237705832|ref|ZP_04536313.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|123084447|sp|Q1RAQ8|SYR_ECOUT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232784|sp|A1AC37|SYR_ECOK1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701376|sp|B7MBT5|SYR_ECO45 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91072675|gb|ABE07556.1| arginine tRNA synthetase [Escherichia coli UTI89]
 gi|115513152|gb|ABJ01227.1| arginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218365510|emb|CAR03237.1| arginyl-tRNA synthetase [Escherichia coli S88]
 gi|226900589|gb|EEH86848.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294493402|gb|ADE92158.1| arginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307626641|gb|ADN70945.1| arginyl-tRNA synthetase [Escherichia coli UM146]
 gi|323952379|gb|EGB48252.1| arginyl-tRNA synthetase [Escherichia coli H252]
 gi|323956508|gb|EGB52250.1| arginyl-tRNA synthetase [Escherichia coli H263]
          Length = 577

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 252/584 (43%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G+   N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G  +  K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|146312088|ref|YP_001177162.1| arginyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987303|sp|A4WBN1|SYR_ENT38 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145318964|gb|ABP61111.1| arginyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 577

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 248/585 (42%), Gaps = 86/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AEL++  + ++   + V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMPPRQLAELVLTHLDLNGIANKVEIAGPGFINIFLDPAF----L 92

Query: 103 SSIVVSGIEYGRNLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +S V + ++  R  +   K   + +++ + N    MHVGH R  ++GD     + F G++
Sbjct: 93  ASHVDAALKSERLGVAQPKAETIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAFLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q   +  R+  + L    DI +S++   ++R + +  RD + 
Sbjct: 203 DAAFAERARSYVVK---LQGGDEYFREMWRKLV---DITMSQNQLAYNRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKKL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFKT--RAGGTVKLSDLLDEALERARRLVAEKNPDMPAEELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D    
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NIDESAL 481

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               +    +    E QL   L ++   +        P+ +  YLYDLA +F G + H  
Sbjct: 482 ANAAVVITED---REAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEH-- 536

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + A+N +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ----CPILSADNEEARNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|168762327|ref|ZP_02787334.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217328684|ref|ZP_03444765.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|189367334|gb|EDU85750.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217318031|gb|EEC26458.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
          Length = 577

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 249/587 (42%), Gaps = 90/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-HLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y     KH  +     E 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209

Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           A  Y  +L +  E   E W  +V     Q   +I  D L  + + HD  + E  ++   P
Sbjct: 210 ARNYVVKLQSGDEYFREMWRKLVDITMTQN--QITYDRLN-VTLTHDDVMGESLYNPMLP 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                I+ +L  +G   E       S+      +D     F++   G+ +   + K DG 
Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +  
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + 
Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQ 480

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L    VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H
Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|24113254|ref|NP_707764.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30063324|ref|NP_837495.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|39932172|sp|Q83KQ3|SYR_SHIFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24052255|gb|AAN43471.1| arginine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30041576|gb|AAP17304.1| arginine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|281601317|gb|ADA74301.1| Arginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313650080|gb|EFS14493.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332757309|gb|EGJ87646.1| arginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332757427|gb|EGJ87762.1| arginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332766600|gb|EGJ96804.1| arginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333017694|gb|EGK37006.1| arginyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 577

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GDT    + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDVFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|332756015|gb|EGJ86368.1| arginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|333003263|gb|EGK22809.1| arginyl-tRNA synthetase [Shigella flexneri K-218]
          Length = 577

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GDT    + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|110805849|ref|YP_689369.1| arginyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|123146957|sp|Q0T3Q1|SYR_SHIF8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110615397|gb|ABF04064.1| arginine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 577

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GDT    + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPYMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|322374239|ref|ZP_08048771.1| arginine--tRNA ligase [Streptococcus sp. C150]
 gi|321276843|gb|EFX53916.1| arginine--tRNA ligase [Streptococcus sp. C150]
          Length = 563

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 253/592 (42%), Gaps = 93/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  I  +I    + + V   G  +IN +
Sbjct: 26  LLETPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   +L  ++  G  Y    IG G  +  +  S N   P  +GH R  V+ D LA
Sbjct: 83  LDKSKISADVLGQVIAQGNHYADQNIGHGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++A  GY+  R  ++ D G Q   L ++   W  ++A+  N    P      +Y++   
Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   D    E       +W   ++  D    A+ +  RD+ L   N  +D      D + 
Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVVDLLTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D            S  D    ++I  + ++PR+I  A+   EP  +A +   LA  F+
Sbjct: 469 SAD---------ATYSLNDVESWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R        Q+  R     RL L +A A+++   L ++GVE+P+EM
Sbjct: 520 KYYAHTR-----ILDQSPERD---SRLALCYATATVLKEALRLLGVEAPDEM 563


>gi|331701595|ref|YP_004398554.1| arginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128938|gb|AEB73491.1| Arginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 563

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 265/602 (44%), Gaps = 116/602 (19%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E+P+  A G L+   A  L++     P  IA+ +V   KID        A   ++N +L
Sbjct: 28  LEKPKTLAMGDLAF-PAFSLAKVFHKAPNAIAQELVE--KIDQSSYEKVEAKGAYLNFFL 84

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              ++  +IL+ ++  G  YG+N  GKG  V I+  S N   P+ +GH R  V+G+++A 
Sbjct: 85  DKGNFSNEILNEVLEEGSAYGQNDSGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVF-W---------------RYQQALYNNDSDL 196
           L+  +GY   ++ ++ D G Q   L ++   W               +Y    +N D + 
Sbjct: 145 LLVKNGYHPIKDNHLGDWGTQFGKLIVAYKKWGNEEDVKKDPINNLVKYYVKFHNEDKEH 204

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE        +   K+L D    E+  +   KW   V   S+++  KI     + L +  
Sbjct: 205 PE---LDDEARETFKKLEDGNEEEVFLW---KWFRKV---SLESFNKI----YEKLGVTF 251

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  ++      + + I  L  +G + E       S+  Q   +D+  L       
Sbjct: 252 DTYNGEAFYN----DKMDEGIQILKDKGLLVE-------SQGAQVVKLDKYNL------- 293

Query: 317 GDDVDRP--LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
                 P  +LKSDG+  Y   D+A   Y    Y+   +  +YV+G++ + Y ++L+AV 
Sbjct: 294 -----NPALILKSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGAEQTYYFQQLKAVL 346

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------- 415
             +    A+ N+       +  +G   K+S R+G  I L  V+D                
Sbjct: 347 LEMGLPSAE-NLHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAIDLAKKQIEAKNPD 403

Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                    EVG  ++ F  L  KN    + DF    +++ + +  P  YVQY++AR  S
Sbjct: 404 LPNKDEVAKEVGVGAIIFGDL--KNERTNNIDFVLEDQLRFEGETGP--YVQYSHARAES 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A DI      DL   N    +   D +  + +  L ++P V+++A    EP ++A 
Sbjct: 460 ILRKAGDI------DLHGAN----KQLDDPAAWETVTALKDFPDVVKSACKDFEPSEIAK 509

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y   LA  F+ +++H +       +   + +L   RL LV AV+ ++   LN++GV++P+
Sbjct: 510 YALRLAKSFNKYYAHSK-------ILVEDDQLAA-RLSLVKAVSIVLKESLNLLGVKAPD 561

Query: 584 EM 585
            M
Sbjct: 562 AM 563


>gi|269122231|ref|YP_003310408.1| arginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616109|gb|ACZ10477.1| arginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 571

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 247/599 (41%), Gaps = 98/599 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I I+       G  +TN AM+ S+ LG +P  IA+  +     +  ++ + IAG GFIN+
Sbjct: 26  IEIQSSNKKGFGDFATNFAMVNSKTLGKNPREIAQTFIDNFSENDIIEKLEIAGPGFINI 85

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L   ++      I     +Y  + +  G K  I++ S N    MH+GH R  ++GD++ 
Sbjct: 86  FLKSKFINSEFKKI--GKEDYDFSFLDNGKKTIIDYSSPNIAKRMHIGHLRSTIIGDSIK 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +M F+G+E+  + +I D G Q   L +       Q  Y  D   P      +Y+K   +
Sbjct: 144 RIMKFTGFEILADNHIGDWGTQFGKLIVGYDRWLDQKNYEED---PIEELERIYVKFSEE 200

Query: 212 -----ELADKYSSEL--LNFPEEK----WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                EL      EL  L   +E+    W   + D S++   KI     K LNI  D++ 
Sbjct: 201 SKNDPELESIAREELRKLQSGDERNNRLWHEFI-DISLKEYDKI----YKRLNITFDLYN 255

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++   P    DI+D L  +    E              D D   + F       D 
Sbjct: 256 GESFYNDMMP----DILDILVSRKIAVE--------------DQDALVVFF-------DE 290

Query: 321 DRPL-----LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           D  L      K DGS+ Y  +DLA  K + E    D  IY+       + +++  +A  +
Sbjct: 291 DTKLHPCIVQKKDGSFLYSTSDLATIKYRREVLHIDKAIYITDERQQDHFRQVFKIAEIL 350

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            +      V +   +  ++DG+    S R G+ I L  ++DE   +  + + +  KN  +
Sbjct: 351 GDGFDYEKVHVWFGIMRFKDGI---FSTRLGNIIKLNDLLDEAKKEVRKTIEI--KNPGI 405

Query: 435 LDFDFCKVKE-------------QSKENPVF---------------YVQYAYARCRSIFR 466
            D +  K+ E             Q++ +PV                Y+QY YAR  S+FR
Sbjct: 406 PDDEKEKISEIVGIGAIKYFDLSQNRTSPVIFEWEKVLSFEGNTGPYLQYTYARIMSVFR 465

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +      ++ ++     ++  + E D S     + L  +P ++  A     P  +A YL+
Sbjct: 466 KLNG--ENIGYNEESEIILESDIERDLS-----LMLLNFPNIVVKAGETYRPNLIADYLF 518

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A  F   ++              +  L   R+ L    A ++ +GL+++G+++ + M
Sbjct: 519 ETAKTFSTFYNQK------HIANETDLALRNSRITLASKTAHVLKAGLDLLGIKTVDRM 571


>gi|290581362|ref|YP_003485754.1| putative arginyl-tRNA synthase [Streptococcus mutans NN2025]
 gi|254998261|dbj|BAH88862.1| putative arginyl-tRNA synthase [Streptococcus mutans NN2025]
          Length = 563

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 264/597 (44%), Gaps = 103/597 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+  + G L+      L++ +   P  IA  +V +I  +   + V   G  +IN +
Sbjct: 26  LLEKPKKSSMGDLAF-PTFSLAKTMRKAPQIIASELVGQIN-NSYFEKVEAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ S +  ++L  ++    +Y +  IG+G  + I+  S N   P  +GH R  V+GD L+
Sbjct: 83  LNKSEISAQVLKEVIKKREDYAQAAIGQGRNIVIDLSSPNIAKPFSIGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GYE  +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFQKLGYETVKINHLGDWGKQFGLLIVAYKKWGSEEAVRAHPIDELLKLYVRINAETKN 202

Query: 211 KELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-LNIQHDIFISEDDFH 266
               D+ + E    L   +E+ L + + +  +++M+  R  L A L I  D +  E  ++
Sbjct: 203 HPELDEEAREWFRKLENNDEEALALWQWFRDESLMEFNR--LYAELGIDFDSYNGEAFYN 260

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + +++  LA +G + E       SK  Q  ++++             ++ P L 
Sbjct: 261 ----DKMEEVVQLLAEKGLLEE-------SKGAQVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            KSDG+  Y   DLA   Y K  Y+  F   IYV+G + + + K+L+AV A +    ++ 
Sbjct: 299 KKSDGATLYITRDLAAAIYRKRTYD--FAKAIYVVGQEQTAHFKQLKAVLAEMGYAWSK- 355

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
           ++       + ++G   K+S R G+ I L   + E                         
Sbjct: 356 DIQHVSFGLVTKNGQ--KLSTRKGNVILLEPTIAEAVKRSLAQIDTKNPDLVNKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKA------- 464

Query: 476 DFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           DF        PQ +E     DT   ++I  + ++P  I  A    EP  +A +   LA  
Sbjct: 465 DFQ-------PQAAENYQLNDTESWEIIKLIQDFPNTIVKAADNFEPSLIARFAIHLAQS 517

Query: 532 FHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ +++H R   ++P               RL L +A A+++   L ++GVE+PNEM
Sbjct: 518 FNKYYAHTRILDDSPERD-----------SRLALSYATATVLKEALALLGVEAPNEM 563


>gi|162455942|ref|YP_001618309.1| arginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161166524|emb|CAN97829.1| argS [Sorangium cellulosum 'So ce 56']
          Length = 577

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 149/606 (24%), Positives = 241/606 (39%), Gaps = 118/606 (19%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     NAAM L + LG  P  +A  IVA +++D     V IAG GF+NL L  +Y
Sbjct: 32  RRSTHADYQANAAMALGKRLGRPPREVAAAIVAALELDGICRKVEIAGPGFVNLTLEDAY 91

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L + L+     G   G     +   V +++   N    MHVGH R  ++GD LA ++   
Sbjct: 92  LTRELAE-TAGGGRLGIAPAAEPETVIVDYSGPNAAKEMHVGHLRSTIIGDALARVLEAL 150

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G+ V R+ ++ D G     L                    L+ F+R  +A ++ D+   E
Sbjct: 151 GHRVIRQNHLGDWGTPFGMLIEHMLDLGEAAASQELSVGDLNAFYRQARAKFDGDAAFAE 210

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G E       + L      W  +V++ S +    + R     + +    
Sbjct: 211 RSRRRVVRLQGGDE-------QTLAL----WRQLVRE-STRYFDSVYRR--LGVTLTDAD 256

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           F  E  ++   P    D+++ L R+G     EG L    +  T K               
Sbjct: 257 FAGESFYNPMLP----DVVEELGRKGLARESEGALCVFPAGFTGKG-------------- 298

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA---- 371
           G+ +   + K DG Y Y   DLA  + +    G   ++YV+G+  S +   + A A    
Sbjct: 299 GEPLPLIVRKQDGGYGYATTDLAAIRHRLTTVGARRIVYVVGAPQSQHFAMVFATAREAG 358

Query: 372 ----AAVSEKKAQINVLLCELVRLYRDGMPIKMSK-RAGDFITLRHVVDE---------- 416
                A +E  A  +VL          G   KM K R+GD + L  ++DE          
Sbjct: 359 WLTPPARAEHVAFGSVL----------GADKKMFKTRSGDTVKLSDLIDEATERAAKVVR 408

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            VG  +V++  L     +   FD+ ++    + N   Y+ YA+A
Sbjct: 409 EKNPDLDAEAADAVARSVGVGAVKYADLSSDRIKDYVFDWDRML-AFEGNTAPYLMYAHA 467

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R RSIFR+A    P          ++  E     +E  L + L  +  V+E+     EP+
Sbjct: 468 RIRSIFRKAGVESPR------EAGIVLSEP----AERALALELLRFGAVLEDVAATLEPH 517

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L  YL++LA  F   +       R   ++A +  +   RL L    A ++  GL ++G+
Sbjct: 518 RLCGYLFELAGSFTSFYE------RCPVLRAESDDVRRSRLALCDLTAEVLAKGLGLLGI 571

Query: 580 ESPNEM 585
           E+P  M
Sbjct: 572 EAPERM 577


>gi|315296537|gb|EFU55834.1| arginyl-tRNA synthetase [Escherichia coli MS 16-3]
          Length = 577

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 251/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G  +  K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|312863951|ref|ZP_07724188.1| arginine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517649|ref|ZP_08070514.1| arginine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311100517|gb|EFQ58723.1| arginine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322123726|gb|EFX95311.1| arginine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 563

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  I  +I    + + V   G  +IN +
Sbjct: 26  LLETPKNADMGDLAF-PAFSLAKVLRKAPKMIAADIAEKIDAS-NFEKVEAVGP-YINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   +L  ++  G  Y    IG G  +  +  S N   P  +GH R  V+ D LA
Sbjct: 83  LDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++A  GY+  R  ++ D G Q   L ++   W  ++A+  N    P      +Y++   
Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   D    E       +W   ++  D    A+ +  RD+ L   N  +D      D + 
Sbjct: 199 EAEKDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELDVSFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D            S  D    ++I  + ++PR+I  A+   EP  +A +   LA  F+
Sbjct: 469 SED---------ATYSLNDVESWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A+++   L ++GVE+P+EM
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563


>gi|315230637|ref|YP_004071073.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183665|gb|ADT83850.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 647

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 169/682 (24%), Positives = 274/682 (40%), Gaps = 137/682 (20%)

Query: 4   FADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + D    +K  LKEI  D   K  K     I+ +       G  +T  A  L++     P
Sbjct: 3   YDDIKEEVKLILKEIISDMLEKEGKSWDGEILFDETPSMELGDFATTVAFQLAKVFRKAP 62

Query: 62  LTIAELIVARIK--IDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIG 118
             IA+ IV + K  +   +  V +AG G+IN +L    + + I+  I+  G +YG++ IG
Sbjct: 63  RIIAQEIVEKTKNKLPEYISKVEVAGAGYINFFLDYEKFGKLIIEEILTKGEKYGKSNIG 122

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IE  S NPT P+H+GH R +++GDT+A +M   GY V  + YI+D G Q     
Sbjct: 123 KGKKVVIEHTSVNPTKPLHMGHARNSILGDTMARVMRTLGYNVEVQNYIDDLGIQF---- 178

Query: 179 LSVFWRY---------------QQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELL 222
             V W Y               ++ +  N  D   G  Y  V+ K       +K   EL+
Sbjct: 179 AQVMWGYLNLKEEFEKIKAEIEERCIKENSIDHVLGLLYVEVHRKMEENPEVEKEVRELM 238

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKA---LNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              EE    I  +   +   ++++  ++    LNI +D+   E D  R            
Sbjct: 239 KKLEEGDNEIA-ELGRRLAEEVVKAQMQTTYRLNIAYDLLSWESDIVRS----------- 286

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMD-RKQLLFRSTMV---GD---DVDRP---LLKSDG 329
                    GI      K  Q    +  K+  ++   +   GD   D++ P   L++SDG
Sbjct: 287 ---------GIFEEAYRKIEQNEHFEWAKEGKYKGAFIMKLGDLFPDMENPDMVLIRSDG 337

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--------- 380
           + TY   D+AY   K+     +M+Y +  D   + K+         + K           
Sbjct: 338 TATYTGKDIAYHMWKFGLVSADMLYKIW-DRIMFEKKEHETWTTARDGKPMPGKFGHADI 396

Query: 381 -INVLLCE----------LVRL------YRDGMPI----------KMSKRAGDFITLRHV 413
            INV+  E           ++L      YR+   +          K S R G +I     
Sbjct: 397 VINVIGAEQRYPQKVVAYALKLLGYEEAYRNFHHLAYEHVVRPEGKFSGRKGTWIGF--T 454

Query: 414 VDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA------------ 459
           VDEV +++V+    ++  KN  L + +  K+ E      + Y    Y+            
Sbjct: 455 VDEVVNEAVKRAKELVEEKNPNLSEEEKKKIAEAVGIGAIRYNMLKYSPEKIITFRWEDV 514

Query: 460 ----------------RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                           RC SI R+A +   DL F+    N     S  D  E  LI  L+
Sbjct: 515 LNFEGESAPYIQYAHARCASILRKAMEKGIDLRFNNLLENA--DFSNLDRKEKDLIKLLS 572

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +P +++      +P+ LA+Y  ++A VF+  +        L  ++A    L   RL LV
Sbjct: 573 RFPEIVKEVGTEIKPHLLAWYANEVAMVFNKFYM------ALPVLKAERGTLE-ERLLLV 625

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   ++ + L ++G+E+P  M
Sbjct: 626 MATKQVLRNVLYLMGIEAPERM 647


>gi|222478607|ref|YP_002564844.1| arginyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|254782966|sp|B9LRF1|SYR_HALLT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222451509|gb|ACM55774.1| arginyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 602

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 163/650 (25%), Positives = 281/650 (43%), Gaps = 115/650 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F S + + L +    + +     D + IERP D     L+++ A  L+  +G  P 
Sbjct: 1   MFRQFRSEVADALGDALASLDLPT---DDLGIERPPDDMDATLASSVAFRLAGEVGDAPP 57

Query: 63  TIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIGKG 120
            +A  +   + +D  D  +       ++N +    Y    L +S V SG  YG  L  + 
Sbjct: 58  NVAATVADAVDVDGYDYLAAVDTAGPYVNFHPGERYFVDTLDASAVDSG--YGA-LPDRD 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T V +E  SANPTGP+HVG  R  +VGD +A+L+ ++GY+V R YY+NDAG Q     ++
Sbjct: 115 TSVVVEHTSANPTGPVHVGRARNPIVGDAVANLLEYAGYDVDRHYYVNDAGRQ-----MA 169

Query: 181 VF-WRYQQ----------ALYNNDSDLPEGYYPG-VYLKHVGKELADKYSS------ELL 222
           VF W Y++          A    + DL   Y  G  YL+    E  +          + L
Sbjct: 170 VFTWAYERFDESDLAGEPARARAEYDLVRYYRKGNAYLEEADPEAVEAAEEEIAAILQGL 229

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              +E+    V +  V  ++  +++ L  L  + D F+ E  F R       DI   L  
Sbjct: 230 EAGDEETYERVGEV-VDTVLGGMKECLARLPAEFDEFVKETRFMR--DGSTDDIAARLKE 286

Query: 283 QGY-VYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             + VYE        +   + ++D     K L+F             L+SD +  Y   D
Sbjct: 287 TDHAVYE--------EDAWQLELDDWGIDKNLVF-------------LRSDDTSLYTTRD 325

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           LA+ + K++  +D  + V+G DH     +L+A    +     ++  ++   V L  DG  
Sbjct: 326 LAHHEWKFDN-YDRAVTVLGEDHKLQADQLDATLELLGNDIDRLGHVIYSYVNL-PDG-- 381

Query: 398 IKMSKRAGDFITLRHVVDE---------------------------------VGSDSVRF 424
            KMS R G  + L  ++DE                                 VG  +VR+
Sbjct: 382 -KMSTRRGTGVMLDDLLDEAIDRAREAVETRMDDRIRDDDLTEEDVERIAHEVGIGAVRY 440

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLD- 476
            ++ ++ ++ + F++    +   ++  F VQY +ARC  I  +A D       +  D + 
Sbjct: 441 DIVSKQPAKAITFEWEDALDFEGQSAPF-VQYVHARCCGILDEAADAGIEVPGVTADSEG 499

Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             D+   +V     E D +   L+  +A +P  IE+A    EP+ +A +  + A  ++  
Sbjct: 500 VVDVGALDVDATVFETDAAR-DLLREVARFPAAIESAADDLEPHTIATFTREFADAYNAF 558

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RE P    V +++ +L   R+ LV A    + + L+++GVE+P  M
Sbjct: 559 Y---RECP---VVTSDDEELRAARVALVAAAKHTMANALDVLGVEAPESM 602


>gi|301300427|ref|ZP_07206628.1| arginine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851970|gb|EFK79653.1| arginine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 563

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 256/590 (43%), Gaps = 92/590 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE+P+    G  +   A +LS+ L   P  I   +V +I      + V   G  ++N +L
Sbjct: 28  IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMITSELVEKID-QTGFEKVEAVGP-YVNFFL 84

Query: 94  SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
                 K ILS ++  G  YG   +G G  V I+  S N   PM +GH R  V+G++LA 
Sbjct: 85  DKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLAL 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           L+    Y+  +  ++ D G Q   L ++   W  ++ +  +  +    YY   + + V  
Sbjct: 145 LLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNN 204

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              D+ + E    L   +E+ L + K +  +++ K   +    LNI  D +  E  ++  
Sbjct: 205 PELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFT-EVYDRLNITFDSYNGEAFYN-- 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326
               + +I D L  +G + E       S+  +  D+++ +L             P L  K
Sbjct: 262 --DKMDEITDLLQEKGLLKE-------SQGAEIVDLEKYEL------------NPALIRK 300

Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINV 383
           +DG+  Y   DLA    +Y R +D    +YV+G + + + K+L+AV   +  +    I+ 
Sbjct: 301 TDGATLYITRDLAAALYRY-RTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHH 359

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
           +   L+         K+S R+G  I L  V+D+                         VG
Sbjct: 360 IPFGLIT----SGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             +V F  L  KN  +  FDF     V+ + +  P  YVQY++AR  SI R+A D+  +L
Sbjct: 416 VGAVVFHDL--KNERINSFDFNLDEVVRFEGETGP--YVQYSHARAMSILRKAGDL--EL 469

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D    +        D    Q +  LA +P  ++ A    EP  +A Y   LA  F+ +
Sbjct: 470 NSDNLEIS--------DPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H R          N+      RL LV +VA+ +   L ++GV++PNEM
Sbjct: 522 YAHSR--------ILNDDAEKNARLALVQSVATTLKESLRLLGVKAPNEM 563


>gi|332089609|gb|EGI94711.1| arginyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 577

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 148/600 (24%), Positives = 253/600 (42%), Gaps = 94/600 (15%)

Query: 37  PRDCAH----------GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           P DC            G    N  M +++ LG+ P  +AE ++  + ++     V IAG 
Sbjct: 21  PADCEQQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGP 80

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN++L P++L + +   + S    G     K T V +++ + N    MHVGH R  ++
Sbjct: 81  GFINIFLDPAFLAEHVQQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTII 138

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYP 202
           GD     + F G++V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y 
Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYR 194

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
                      A K+  E   F E     +VK   +Q+  +  R+  + L    DI +++
Sbjct: 195 D----------AKKHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQ 238

Query: 263 DD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---G 317
           +   + R + +  RD +   +    +  GI+   K+K     + +   ++F        G
Sbjct: 239 NQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAA 373
           + +   + K DG Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  
Sbjct: 298 EPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGY 357

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
           V E     + +   +  L +DG P K   RAG  + L  ++DE                 
Sbjct: 358 VPESVPLEHHMFGMM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMP 413

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR
Sbjct: 414 ADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFR 472

Query: 467 QAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           +A     ++D + L    VI +E      E QL   L ++   +        P+ +  YL
Sbjct: 473 KA-----EIDEEQLAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYL 523

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDLA +F G + H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 524 YDLAGLFSGFYEH------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|67921649|ref|ZP_00515167.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
 gi|67856761|gb|EAM52002.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
          Length = 585

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 254/596 (42%), Gaps = 97/596 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +   RD  HG    N A+ L++ LG +P  IA+ I++ + +D   ++  I G GFINL L
Sbjct: 31  VTTARDLRHGDYQANIALPLAKKLGKNPREIAQTIISNLAVDTICETPTIGGPGFINLKL 90

Query: 94  SPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            P+YL   L S+      GIE     I   T+V ++F S N    MHVGH R  ++GD +
Sbjct: 91  KPNYLENKLKSLYQEQGLGIEK----IPDSTQVIVDFSSPNIAKEMHVGHLRSTIIGDCI 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A  + F GY+V R  ++ D G Q   L   +   Y  AL   D+ L  G     Y +   
Sbjct: 147 ARTLEFLGYDVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADA-LEIGDLVNFYKQ--- 202

Query: 211 KELADKYSSELLNFPEEKWLPIVK-----DYSVQA---MMKIIRDDLKALNIQHDIFISE 262
              A K   E   F +     +VK       S QA   +    R + + +  + D+ ++E
Sbjct: 203 ---AKKRFDEDTEFQQRAREAVVKLQSGEQESSQAWELLCDQSRREFQQIYDRLDVKLTE 259

Query: 263 DDFHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
               RG+   +P + D+I  L       EGIL   K     +C      L   +   GD 
Sbjct: 260 ----RGESFYNPYLDDVITALDA-----EGIL---KKDQGAQCVF----LEGFTNKSGDP 303

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
           +   + KSDG Y Y   DLA  + +  E     +IYV  +  S +  ++  VA       
Sbjct: 304 LPLIVQKSDGGYNYATTDLAALRYRIKEDQAKRIIYVTDAGQSNHFAQVFQVANKANFLP 363

Query: 375 ------------------------SEKKAQINVLLCELVRLYRDGMPIKMS----KRAGD 406
                                   S +  ++  LL E +   R  +  ++     K + D
Sbjct: 364 DTVEVTHVPFGLVKGEDGKKLKTRSGETIKLKDLLNEAINYARKDLENRLQSEERKESED 423

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           FI   +V   VG  +V++  L +  S    F + K+    + N   Y+ YAYAR +SI R
Sbjct: 424 FIN--NVAQTVGISAVKYADLSQNRSSDYIFSYDKML-ALQGNTAPYMLYAYARIQSISR 480

Query: 467 QAKDIFPDLDFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           +      ++D++    N   ++ +++E +    + ++ L+E  + +E   +   P +L  
Sbjct: 481 EG-----NIDYENLGENIQIILKEDTEMELG--KYLLQLSETIKEVEKTLL---PNRLCD 530

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           YLY+L+  F+  + +    P L+    +       RL L    A  +  GL+++G+
Sbjct: 531 YLYELSKKFNRFYENC---PVLK----SEEPTKTSRLLLCDLTAKTLKLGLSLLGI 579


>gi|284028534|ref|YP_003378465.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283807827|gb|ADB29666.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 562

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 243/589 (41%), Gaps = 109/589 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  TN A+ L++ LG  P  +A  +VA  ++D       IAG GF+NL L PS L    
Sbjct: 37  GHFQTNLALRLAKTLGTSPRAVAAELVAHAELDDLCAPAQIAGPGFVNLTLLPSTL---- 92

Query: 103 SSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                +G+ E  R+L   G +V +++   N    MHVGH R  V+GD L +++ ++GYEV
Sbjct: 93  ----AAGVNELPRSLPTTGRRVVVDYSQPNVAKQMHVGHLRSTVIGDALCNVLRYAGYEV 148

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            R+ ++ D G Q   + +      Q  + + D +                E+   Y    
Sbjct: 149 VRQNHVGDWGTQFGMM-VEQLLDEQTPVESLDLE----------------EMQQLYQRSR 191

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-QHDIFISEDDFHR-----GDPSPIRD 275
            +F  +   P+  D S + ++ +   D +   I Q  + IS  +F R     G P    D
Sbjct: 192 KHFDSD---PVFADRSRRRVVLLQSGDPRTRGIWQQLVDISLAEFDRVYALLGSPLTQAD 248

Query: 276 IID----NLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--- 324
           ++     N A QG V +    G+L           +    Q  F     G D   PL   
Sbjct: 249 VVGESAYNDALQGIVSDLAAAGLL----------TESGGAQCAFLPGFTGRD-GSPLPVI 297

Query: 325 -LKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKA 379
             KSDG + Y A DLA  + +  +   D ++YV+    S + +++ A+A     + E  +
Sbjct: 298 VQKSDGGFGYSATDLAAVRHRVRDLKADRIVYVVDHRQSLHFQQIFALARTARWLPETTS 357

Query: 380 QINVLLCELVRLYRDGMPIKMS---------------KRAGDFITLRHVVDE------VG 418
             +V    +  L  DG P K                  RAG  +  R  +D       VG
Sbjct: 358 AEHVAFGTV--LGPDGKPFKTRDGGTVSLVSLLDAAIARAGALLADRTGIDRESVARAVG 415

Query: 419 SDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
             +V++  L   R N  + D D   V       P  Y+QYA+AR   +  +A        
Sbjct: 416 IGAVKYADLSSDRTNDYVFDLDRM-VAMTGNTGP--YLQYAHARLTRLLSKAG------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P   +   +E   +E +L + LA +   ++      +P++L  YLYD+AS     +
Sbjct: 466 ---HPEGQVTVLAE--PAEQRLALLLAGFGDAVQQVAETLQPHRLCTYLYDVASALSAFY 520

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 P       +  +    RL L  A  ++++ GL ++G+ +P+ M
Sbjct: 521 ESCPVLP-------SEGETRTSRLALCTATRTVLHDGLALLGITAPDAM 562


>gi|227543907|ref|ZP_03973956.1| arginyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300909654|ref|ZP_07127115.1| arginine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186108|gb|EEI66179.1| arginyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300893519|gb|EFK86878.1| arginine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 562

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 269/615 (43%), Gaps = 115/615 (18%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D K ++E KI      ERP+D ++G  +      L++ L   P  IA  +V ++  D 
Sbjct: 17  EMDVK-EIEAKI------ERPKDSSNGDYAF-PTFFLAKTLHKAPQMIASELVEKVDQD- 67

Query: 77  DVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
             + V +AG  +IN +L  + +  KIL +I+     YG   +G  + V I++ S N   P
Sbjct: 68  GFEKVVVAGP-YINFFLDKAQVGAKILQTILADPEHYGEIDLGHQSNVTIDYSSPNIAKP 126

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDS 194
           M +GH R  ++G+ +A ++    Y + R  Y+ D G Q   L A    W  +  +  +  
Sbjct: 127 MGMGHLRSTMIGEAVARILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPI 186

Query: 195 DLPEGYYPGVYLKHVG------KELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIR 246
           +    YY  V + +         E    + ++L +  EE W      ++ S++   ++  
Sbjct: 187 NTLLKYY--VRINNEADEHPEYTEAGRDWFAKLEHGDEEAWRLWHWFREVSLERFQRV-- 242

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K L++  D F  E    +    PI+ + D         + +L P  S+  +  D+D 
Sbjct: 243 --YKMLDVNFDSFNGEAFSAQKMEEPIQLLRD---------KNLLKP--SRGAEIVDLDE 289

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS 361
             L             PLL  KS+G+ TY   DLA   + K  Y  G    +YV+G++  
Sbjct: 290 YNL------------PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQE 335

Query: 362 GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415
            Y K+L A    +      QI  +   L+ L  +G   KMS R G+ ++L  V++     
Sbjct: 336 TYFKQLRAALKEMGFNWWDQIEHISFGLMNL--NGK--KMSTRKGNVVSLEDVLNDSIDL 391

Query: 416 --------------------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVF 452
                               EVG  +V F  L  +R+N+  ++F     VK + +  P  
Sbjct: 392 ARKQIAEKNPDLENADEVAKEVGVGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP-- 447

Query: 453 YVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           YVQYA AR  SI R+   +D F D+D            +   T   +LI  L +Y   I+
Sbjct: 448 YVQYARARAESILRKGGIRD-FSDVDL-----------TNAGTEAWELISFLGQYSEAIK 495

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  +P  +A Y  +LA  F+ +++H R          +  +    RL L  AV+ ++
Sbjct: 496 RAALNYDPSVIAKYALELAKKFNQYYAHTR--------ILDKDEAQPARLALTQAVSDVL 547

Query: 571 NSGLNIIGVESPNEM 585
            S LN++ +++P+EM
Sbjct: 548 KSALNLLDIKAPDEM 562


>gi|28872251|ref|NP_794870.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|38258308|sp|Q87V03|SYR_PSESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28855505|gb|AAO58565.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 578

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 253/602 (42%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L +  +S  +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALASRLDA-ALSDPQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKAAGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D  +Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRALYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
             +  Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKNPQVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD    +++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|172038489|ref|YP_001804990.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710999|sp|B1X0N5|SYR_CYAA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171699943|gb|ACB52924.1| arginyl-tRNA-synthetase [Cyanothece sp. ATCC 51142]
          Length = 585

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 251/590 (42%), Gaps = 93/590 (15%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           RD  HG    N A+ L++ LG +P  IA++I+  + ++   ++  I G GFINL L  SY
Sbjct: 35  RDLRHGDYQANIALPLAKKLGKNPREIAQIIINNLSLNTICENPTIGGPGFINLKLKSSY 94

Query: 98  LRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           L   L S+  +   GIE   N      KV ++F S N    MHVGH R  ++GD +A  +
Sbjct: 95  LETQLKSLYQNQRLGIEKVHN----ADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTL 150

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            F GYEV R  ++ D G Q   L   +   Y  AL   D  L  G     Y +      A
Sbjct: 151 EFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADV-LEIGDLVNFYKQ------A 203

Query: 215 DKYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFH 266
            K   E   F E     +VK  S         Q +    R + + +  + D+ + E    
Sbjct: 204 KKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIE---- 259

Query: 267 RGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           RG+   +P + D+I  L  QG +        K +  Q C      L   +   GD +   
Sbjct: 260 RGESFYNPYLNDVIKALDEQGIL-------EKDQGAQ-CVF----LEGFTNKSGDPLPLI 307

Query: 324 LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-------- 374
           + KSDG Y Y   DLA  K +  E     +IYV  +  S +  ++  VA           
Sbjct: 308 VQKSDGGYNYATTDLAALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQVAKKANFLPDTVD 367

Query: 375 --------------------SEKKAQINVLLCELVRLYRDGMPIKMS----KRAGDFITL 410
                               S +  ++  LL E V   R  +  ++     K + DFI  
Sbjct: 368 VTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNYARKDLENRLQAEDRKESEDFIN- 426

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAK 469
            HV + VG  +V++  L +  + + D+ F   K  + + N   Y+ YAYAR +SI R+  
Sbjct: 427 -HVAETVGISAVKYADLSQ--NRISDYIFSYDKMLALQGNTAPYMLYAYARIQSISREG- 482

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               ++D++    N+  Q    + +E++L  +L +    I+    +  P +L  YLY+L+
Sbjct: 483 ----NIDYENLGENI--QILLKEDTEIELGKYLLQLNETIKEVEKSLLPNRLCDYLYELS 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             F+  + +    P L+    ++  +   RL L    A  +  GL+++G+
Sbjct: 537 KKFNRFYENC---PVLK----SDEPVKTSRLLLCDLTARTLKLGLSLLGI 579


>gi|110641994|ref|YP_669724.1| arginyl-tRNA synthetase [Escherichia coli 536]
 gi|191173026|ref|ZP_03034560.1| arginyl-tRNA synthetase [Escherichia coli F11]
 gi|300982204|ref|ZP_07175916.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|123147998|sp|Q0TGV6|SYR_ECOL5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110343586|gb|ABG69823.1| arginyl-tRNA synthetase [Escherichia coli 536]
 gi|190906737|gb|EDV66342.1| arginyl-tRNA synthetase [Escherichia coli F11]
 gi|300307274|gb|EFJ61794.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|324013521|gb|EGB82740.1| arginyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 577

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G  +  K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|56461560|ref|YP_156841.1| arginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81362378|sp|Q5QV46|SYR_IDILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56180570|gb|AAV83292.1| Arginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 580

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 143/593 (24%), Positives = 248/593 (41%), Gaps = 81/593 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++RPRD +HG  +TN A++L++P   +P  +AE IVA +  +  +  + IAG GFIN 
Sbjct: 30  IQLDRPRDKSHGDFATNLALMLAKPAKSNPRQLAEAIVAAVPENSLLSKMDIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +S   L+  L++++ S      ++  +   + I++ S N    MHVGH R A++GD ++
Sbjct: 90  TISQDQLKDQLTAMLNSD-SLNVDVAEESKTIVIDYSSPNLAKEMHVGHLRSAIIGDAVS 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G++V R+ ++ D G Q   L       Y +AL N  ++         Y      
Sbjct: 149 RVCEFLGHKVIRQNHVGDWGTQFGML-----LAYMEALDNQSAEYELSNLETFY------ 197

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFIS--EDDFH 266
               K + +  +  EE       D + Q ++K+   D   LK  N   D+ +S  +D + 
Sbjct: 198 ----KAAKQRFDESEE-----FADRARQLVVKLQSGDEYCLKLWNQFIDVSLSHCQDVYD 248

Query: 267 RGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           R      RD  D +A   Y     G++   + K     D   + +        +    P+
Sbjct: 249 RLGVKLTRD--DVMAESAYNDKLPGVIEHLREKGLLTEDQGAQCVFLEEYKGKEGEPLPI 306

Query: 325 L--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKA 379
           +  K  G Y Y   DLA  + +  E G D+++Y + +  + +  ++  +A  A   E   
Sbjct: 307 IVQKKGGGYLYATTDLAAIEYRQKELGGDHLMYFVDARQALHFDQIFTLARKAGFVEGDI 366

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q+N      V + +DG P K   R G    L  ++DE                       
Sbjct: 367 QLNHYGFGTV-MGKDGKPYK--SRDGGVTKLADLLDEAERRALELLQQKTTDLSEEQQKR 423

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +  +    FD+  +    + N   Y+ YA+ R  SIF +  D  
Sbjct: 424 VAEVVGISSVKYADLSKNRTSDYVFDWNHML-TFEGNTAPYLLYAFTRVNSIFDRLGDTA 482

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            D + D+            D  EL L   L  +  V+        P+ L  +L+DLA  F
Sbjct: 483 FDRNADIILS---------DERELALANQLVRFNEVLHQVQDKAMPHFLCGFLFDLAGRF 533

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +           +   +  L   RL+L    A+++  GL ++G+ +  +M
Sbjct: 534 SSFYE------ACPILNQEDEALRNSRLKLSMLTANVLKQGLELLGIPTLEKM 580


>gi|283832728|ref|ZP_06352469.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072410|gb|EFE10519.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 577

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 251/590 (42%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAQHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              +      G     K T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  QQALTCD-RLGVTQPAKQTVV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q   +  R+  + L    DI +S++   + R + +  RD 
Sbjct: 201 DEDEAFAERARSYVVK---LQGGDEYFREMWRKLV---DITMSQNQLTYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385
              D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMML 373

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                  +DG P K   RAG  + L  ++DE                           VG
Sbjct: 374 G------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D +
Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEN 479

Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFHGH 535
            L    VI +E      E QL   L ++   +  A +A+E  P+ +  YLYD+A +F G 
Sbjct: 480 ALTNAQVIIREDR----EAQLAARLLQFEETL--AVVAREGTPHVMCAYLYDVAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAENEEIRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|116334092|ref|YP_795619.1| arginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269224|sp|Q03QD4|SYR_LACBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116099439|gb|ABJ64588.1| arginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 563

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 264/600 (44%), Gaps = 112/600 (18%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP+    G ++      L++ L   P  IA+ +  ++      + V + G  ++N + 
Sbjct: 28  LERPKTSDKGDMAF-PTFTLAKLLHQAPQQIAQDLAEKLD-KTSFEKVEVVGP-YLNFFF 84

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              +Y  + L +++ +G +YG+N  G+G  V I+  S N   PM +GH R  V+G+++A 
Sbjct: 85  DKGAYSAETLQTVLTAGADYGQNDDGQGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSIAE 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG-------YYPGVY 205
           ++  +GY   ++ ++ D G Q   L  +        L+ N++D+          YY   +
Sbjct: 145 ILTKNGYHPIKDNHLGDWGTQFGKLITAY------KLWGNEADVKADPINKLVEYYVRFH 198

Query: 206 LKHVGK----ELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            + V K    + A ++  +L N  EE     +W    +D S+Q       D  + L +  
Sbjct: 199 KEDVDKPELDDTAREWFRKLENGDEEAHELWQWF---RDASLQEF----NDVYEKLGVTF 251

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D F  E  ++      + +++  L  +  + E       S+  Q  D+ +  L       
Sbjct: 252 DTFNGEAFYN----DKLEEVVQILKDKNLLVE-------SQGAQVVDLSKYNL------- 293

Query: 317 GDDVDRP--LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
                 P  +LKSDG+  Y   D+A   Y    Y    +  +YV+GS+ + Y K+L+AV 
Sbjct: 294 -----NPALILKSDGASLYITRDIATALYRDRTYHPAKN--LYVVGSEQTYYFKQLKAVL 346

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------- 415
             +    A  ++       +  DG   K+S R+G  I L  V+D                
Sbjct: 347 QEMGVPSAD-DLEHIPFGLITVDGK--KLSTRSGRIILLAKVLDDSVKLAAEEINEKNPD 403

Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFC-KVKEQSKENPVFYVQYAYARCRSIF 465
                    +VG  ++ F  L  + +  +DF    ++K + +  P  YVQY++AR  SI 
Sbjct: 404 LANKDEVAQQVGVGAIVFGDLKNERTNNIDFVLADQLKFEGETGP--YVQYSHARAESIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A  +    D      N I     +DT     I  LA++P +++ A    EP  +A Y 
Sbjct: 462 RKAGKVTITTD-----GNQISDPEAWDT-----IKTLADFPAMVKMACDEFEPSVIAKYA 511

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             LA  F+ +++H +       +   + +L   RL LV AV++++   L ++GV++P+EM
Sbjct: 512 IRLAKTFNKYYAHSK-------ILTEDAELP-ARLALVKAVSTVLKESLRLLGVQAPDEM 563


>gi|331267177|ref|YP_004326807.1| arginyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683849|emb|CBZ01467.1| arginyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 563

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 251/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVAIGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L  ++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQDVITEKDHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+      L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  I+D LA +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAIVDILAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   + E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F  N     S  D    ++I  L ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPNTAGNYSLNDAESWEIIKLLQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|300819860|ref|ZP_07100045.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300527557|gb|EFK48619.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 577

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNSIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|309813013|ref|ZP_07706741.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308433085|gb|EFP56989.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 594

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 148/596 (24%), Positives = 254/596 (42%), Gaps = 98/596 (16%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRK 100
           +  NAAM L++ +G +P  +A  IV  ++ D +V    D V IAG GF+N+ LS  ++  
Sbjct: 42  VQVNAAMALAKKVGKNPREVASAIVEALRADDEVMALVDDVEIAGPGFLNITLSTDWVAA 101

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
             S+I+  G   G     K   + I++ S N    MHVGH R  VVGD+LA ++   G+ 
Sbjct: 102 QASTILADG-SLGVAPAAKTEIIPIDYSSPNVAKEMHVGHLRTTVVGDSLARVLERLGHT 160

Query: 161 VTREYYINDAGAQINTLALSVFW----RYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           V R+ ++ D G     L   +        + AL  +D   P  +Y     K    E A+ 
Sbjct: 161 VIRQNHVGDWGTPFGMLIEHLLEVGEDSPEAALLESD---PNAFYQAARTKFDTAEKAEP 217

Query: 217 YSSEL-LNFPEEKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIF-ISEDDFHRGDPS 271
             S+   N    K + +++    + +    K++       N  + +  ++  D      S
Sbjct: 218 AGSKGDFNTRARKRVTLLQGGDPETLAHWNKLMERSKAYFNKVYGLLGVTLTDADLAGES 277

Query: 272 PIRD----IIDNLARQG--YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPL 324
              D    I D+L  +G   V +G L          C       +F+    G DD   PL
Sbjct: 278 TYNDELAGICDDLESRGIAVVSDGAL----------C-------IFQDEFTGRDDAPVPL 320

Query: 325 L--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKK 378
           +  KSDG Y Y   DLA  + + ++   D M+YV+G+  + + +   A    A  +  + 
Sbjct: 321 IIRKSDGGYGYATTDLATVRHRSFDLQGDRMVYVVGAPQNLHFRMTWAAADKAGYIRPES 380

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
             I+V +  +  L +DG   K   R+GD + L  ++ E                      
Sbjct: 381 TPIHVQIGSV--LGKDGKMFKT--RSGDSVLLMDLLGEAVDRAAGVVSESKAEMSDEERA 436

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L   +     FDF ++   +  N   Y+QYA  R RSI  +A + 
Sbjct: 437 VVARQVGIGAVKYADLSVSHDSEYIFDFDRMLALTG-NTGPYLQYAATRIRSILARAAEA 495

Query: 472 --FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
              P  +  L            + +E  L + L +Y  V+     + EP++LA YL++LA
Sbjct: 496 GYSPAAEITL-----------GEDAERALALKLLDYGAVVAAVGESLEPHRLAGYLFELA 544

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + F   +       +   ++A++  +   RL L      ++  GL+++G+E+P +M
Sbjct: 545 TTFTAFYE------KCPVLKADDDDVRASRLALCELTLGVLVDGLSLLGIETPEKM 594


>gi|307705749|ref|ZP_07642594.1| arginyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620667|gb|EFN99758.1| arginyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 563

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 250/596 (41%), Gaps = 101/596 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVITEKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    + D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVDFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +  +  
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLKEMGYDWS 354

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------------HV 413
             I  + C LV   ++G   K+S R G+ I L                          HV
Sbjct: 355 DDITHVPCGLVT--KEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEDKNPELENKDHV 410

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
              VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A    
Sbjct: 411 AHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD--- 465

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                  F        S  D    ++I  + ++PR+I  A    EP  +A +   LA  F
Sbjct: 466 -------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAF 518

Query: 533 HGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +++H R   ENP               RL L +A A ++   L ++GVE+P +M
Sbjct: 519 NKYYAHTRILDENPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|293415191|ref|ZP_06657834.1| arginyl-tRNA synthetase [Escherichia coli B185]
 gi|331653286|ref|ZP_08354291.1| arginine--tRNA ligase [Escherichia coli M718]
 gi|291432839|gb|EFF05818.1| arginyl-tRNA synthetase [Escherichia coli B185]
 gi|331049384|gb|EGI21456.1| arginine--tRNA ligase [Escherichia coli M718]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAT 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|306834549|ref|ZP_07467662.1| arginine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|296777690|gb|ADH43107.1| arginyl-tRNA synthetase [uncultured bacterium MID12]
 gi|304423351|gb|EFM26504.1| arginine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 563

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 156/622 (25%), Positives = 277/622 (44%), Gaps = 110/622 (17%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           + R++N + E+D     +++I++  ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 8   AERIQNIVPELD-----QEQIIN--LLEIPKNSDMGDLAF-PAFSLAKILRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +    K+D        A   +IN +L    +   IL  ++ +G +Y    +G+G  V I+
Sbjct: 60  VAE--KMDATGFEKIEAVGPYINFFLDKKSISADILGQVIANGSDYASQDLGEGRNVAID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
             S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGD 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMK 243
           ++A+  +  D          LK   +  A+  +   L+    +W   ++  D    ++ +
Sbjct: 178 EEAVKAHPID--------ELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQ 229

Query: 244 IIRDD-LKALNIQHD-IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
             RD+ L   N  +D + +S D F+ G+      + +++D L  +G + E       S+ 
Sbjct: 230 WFRDESLVEFNRLYDELGVSFDSFN-GEAFYNDKMDEVVDILTEKGLLEE-------SQG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMI 353
            Q  ++++             ++ P L  KSDG+  Y   DLA   Y K  Y+  F   I
Sbjct: 282 AQVVNLEKY-----------GIEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKAI 328

Query: 354 YVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+G++ S + K+L+AV   +  E    I  +   LV   ++G   K+S R G+ I L  
Sbjct: 329 YVVGNEQSAHFKQLKAVLNEMGFEWNEDITHVPFGLVT--KEGK--KLSTRKGNVILLEP 384

Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQS 446
            + E                         VG  +++F  L        DFD    V  + 
Sbjct: 385 TIAEAVKRAEDQINAKNPNLADKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEG 444

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           +  P  YVQYA+AR +SI R+A+          F  +V    S  D    +++  + ++P
Sbjct: 445 ETGP--YVQYAHARIQSILRKAE----------FTPSVNQVYSLDDAESWEIVKLIQDFP 492

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLV 563
           R+I+ A    EP  +A +  +LA  F+ +++H R   E+P               RL L 
Sbjct: 493 RIIKRAADNFEPSIVAKFAINLAQSFNKYYAHTRILDESPERD-----------SRLALS 541

Query: 564 HAVASIINSGLNIIGVESPNEM 585
           +A A+++   L ++GVE+PNEM
Sbjct: 542 YATATVLKEALRLLGVEAPNEM 563


>gi|157161347|ref|YP_001458665.1| arginyl-tRNA synthetase [Escherichia coli HS]
 gi|166987302|sp|A8A178|SYR_ECOHS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157067027|gb|ABV06282.1| arginyl-tRNA synthetase [Escherichia coli HS]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 251/588 (42%), Gaps = 92/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + S      + +G  T     + +++ + N    MHVGH R  ++GD     + F G
Sbjct: 97  QQALAS------DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLG 150

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELA 214
           ++V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A
Sbjct: 151 HKVIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------A 196

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSP 272
            K+  E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + + 
Sbjct: 197 KKHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTL 250

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDG 329
            RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG
Sbjct: 251 TRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDG 309

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLL 385
            Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + + 
Sbjct: 310 GYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMF 369

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
             +  L +DG P K   RAG  + L  ++DE                           VG
Sbjct: 370 GMM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADGLEKLANAVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D +
Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEE 479

Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L    VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + 
Sbjct: 480 QLAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYE 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 536 H------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|90022024|ref|YP_527851.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|109895032|sp|Q21I40|SYR_SACD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89951624|gb|ABD81639.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 579

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 245/595 (41%), Gaps = 94/595 (15%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           +    G    N AM  ++ L  +P  +A+ I+  + ++     V IAG GFIN++L P +
Sbjct: 32  KKAGFGDYQANGAMGAAKALKTNPREVAQKIIDNLDLNGIASKVEIAGPGFINIHLDPKW 91

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L +  +  V +    G         V I++ S N    MHVGH R  ++GD +A ++ F+
Sbjct: 92  LAQ-QTVAVTNSTNLGILPKNNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFT 150

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK--ELAD 215
           G +V R+ ++ D G Q   L   +           +  L  G  P + L+ +    + A 
Sbjct: 151 GDKVIRQNHVGDWGTQFGMLIAEL-----------EDQLGSGERPELALQDLEGFYQQAK 199

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISEDDFHR 267
           K+  +   F +     +VK  S  A +  +  + + +++ H        ++ + E D  R
Sbjct: 200 KHFDDDPAFADRARDYVVKLQSGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADV-R 258

Query: 268 GDPSPIRD---IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--STMVGDDVDR 322
           G+ +   D   ++  L  QG   E              D   K +     +   GD    
Sbjct: 259 GESAYNDDLAPVVAELEAQGLAVE--------------DQGAKVVFLHELADKNGDPSVA 304

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            + K DG Y Y  +DLA    +Y  G    + ++Y + +  S +++++  +A        
Sbjct: 305 IIQKKDGGYLYSTSDLAAL--RYRVGTLKANRILYFIDARQSLHMQQVFTLARKAGFADE 362

Query: 380 QINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-- 436
            ++         L  DG P K   R+G  + L  ++DE    + + +    KN +L +  
Sbjct: 363 WLSTEHHAFGTMLGSDGKPFKT--RSGGTVKLAQLLDEAVERAAKEVRT--KNPDLTEEE 418

Query: 437 ---------------FDFCKVKEQS-----------KENPVFYVQYAYARCRSIFRQAKD 470
                           D CK +              + N   Y+QYAY R RSIFR+A +
Sbjct: 419 MAEVASKVGIGAVKYADLCKTRTNDYVFNWESMLAFEGNTGPYMQYAYTRIRSIFRRANE 478

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                + D F   V   E +    E+QL + L + P ++E       P+ +  YLYDLAS
Sbjct: 479 -----NMDTFESEVNLTEPQ----EVQLAIKLLQLPEIVEQIAADAYPHVMCNYLYDLAS 529

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F   +      P L+  +     +   RLQL   VA  +  GL+++G+E   +M
Sbjct: 530 LFMTFY---EACPILK--EGVEPAVKTSRLQLSKGVARTLAQGLDLLGIEVMEKM 579


>gi|193065443|ref|ZP_03046512.1| arginyl-tRNA synthetase [Escherichia coli E22]
 gi|260844286|ref|YP_003222064.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855816|ref|YP_003229707.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868474|ref|YP_003234876.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|192926848|gb|EDV81473.1| arginyl-tRNA synthetase [Escherichia coli E22]
 gi|257754465|dbj|BAI25967.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759433|dbj|BAI30930.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764830|dbj|BAI36325.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323152635|gb|EFZ38911.1| arginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323158639|gb|EFZ44653.1| arginyl-tRNA synthetase [Escherichia coli E128010]
 gi|323174607|gb|EFZ60228.1| arginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180673|gb|EFZ66218.1| arginyl-tRNA synthetase [Escherichia coli 1180]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|187731263|ref|YP_001880686.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|218554464|ref|YP_002387377.1| arginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|256017920|ref|ZP_05431785.1| arginyl-tRNA synthetase [Shigella sp. D9]
 gi|300904762|ref|ZP_07122591.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300917544|ref|ZP_07134200.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|301306901|ref|ZP_07212947.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|332278952|ref|ZP_08391365.1| arginyl-tRNA synthetase [Shigella sp. D9]
 gi|226701378|sp|B7M2G7|SYR_ECO8A RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689519|sp|B2U4X7|SYR_SHIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187428255|gb|ACD07529.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|218361232|emb|CAQ98816.1| arginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|300403322|gb|EFJ86860.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300415223|gb|EFJ98533.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300837876|gb|EFK65636.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315257291|gb|EFU37259.1| arginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320177414|gb|EFW52415.1| Arginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320187322|gb|EFW62019.1| Arginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320198571|gb|EFW73171.1| Arginyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|324118936|gb|EGC12825.1| arginyl-tRNA synthetase [Escherichia coli E1167]
 gi|332101304|gb|EGJ04650.1| arginyl-tRNA synthetase [Shigella sp. D9]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|194429348|ref|ZP_03061874.1| arginyl-tRNA synthetase [Escherichia coli B171]
 gi|194412655|gb|EDX28951.1| arginyl-tRNA synthetase [Escherichia coli B171]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDETLERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|170769348|ref|ZP_02903801.1| arginyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121672|gb|EDS90603.1| arginyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 143/586 (24%), Positives = 249/586 (42%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + S      + +G  T     + +++ + N    MHVGH R  ++GD     + F G
Sbjct: 97  QQALAS------DRLGIATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLG 150

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLP--EGYYPGVYLKHVGKELAD 215
           + V R  ++ D G Q   L   + W  +Q   N  D +L   EG+Y            A 
Sbjct: 151 HNVIRANHVGDWGTQFGML---IAWLEKQQQENAGDMELADLEGFYRD----------AK 197

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
           K+  E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  
Sbjct: 198 KHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +  
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L
Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EISEE---QL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H 
Sbjct: 482 AAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|16129828|ref|NP_416390.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89108716|ref|AP_002496.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170081532|ref|YP_001730852.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188493635|ref|ZP_03000905.1| arginyl-tRNA synthetase [Escherichia coli 53638]
 gi|194434108|ref|ZP_03066377.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|238901091|ref|YP_002926887.1| arginyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773167|ref|YP_003035998.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161936|ref|YP_003045044.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022459|ref|ZP_05436324.1| arginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|291283058|ref|YP_003499876.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293410188|ref|ZP_06653764.1| arginyl-tRNA synthetase [Escherichia coli B354]
 gi|300822350|ref|ZP_07102491.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300928908|ref|ZP_07144413.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300935853|ref|ZP_07150811.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|301029326|ref|ZP_07192423.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301645607|ref|ZP_07245536.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307138541|ref|ZP_07497897.1| arginyl-tRNA synthetase [Escherichia coli H736]
 gi|312969919|ref|ZP_07784102.1| arginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331642494|ref|ZP_08343629.1| arginine--tRNA ligase [Escherichia coli H736]
 gi|331657926|ref|ZP_08358888.1| arginine--tRNA ligase [Escherichia coli TA206]
 gi|331683384|ref|ZP_08383985.1| arginine--tRNA ligase [Escherichia coli H299]
 gi|135169|sp|P11875|SYR_ECOLI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558757|sp|B1XHE4|SYR_ECODH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|259511643|sp|C4ZQG0|SYR_ECOBW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|581040|emb|CAA33384.1| unnamed protein product [Escherichia coli K-12]
 gi|1736522|dbj|BAA15686.1| arginyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788184|gb|AAC74946.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|169889367|gb|ACB03074.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188488834|gb|EDU63937.1| arginyl-tRNA synthetase [Escherichia coli 53638]
 gi|194417652|gb|EDX33752.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|209767328|gb|ACI81976.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767334|gb|ACI81979.1| arginine tRNA synthetase [Escherichia coli]
 gi|238860014|gb|ACR62012.1| arginyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377597|emb|CAQ32353.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324211|gb|ACT28813.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973837|gb|ACT39508.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978031|gb|ACT43701.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449001|gb|ACX39423.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|290762931|gb|ADD56892.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291470656|gb|EFF13140.1| arginyl-tRNA synthetase [Escherichia coli B354]
 gi|299877752|gb|EFI85963.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300458965|gb|EFK22458.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300463136|gb|EFK26629.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300525233|gb|EFK46302.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|301076139|gb|EFK90945.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|309702099|emb|CBJ01414.1| arginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310338204|gb|EFQ03293.1| arginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315136519|dbj|BAJ43678.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|315617901|gb|EFU98499.1| arginyl-tRNA synthetase [Escherichia coli 3431]
 gi|320177757|gb|EFW52745.1| Arginyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320647090|gb|EFX15923.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652373|gb|EFX20671.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657974|gb|EFX25736.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658547|gb|EFX26241.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668445|gb|EFX35272.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323937134|gb|EGB33414.1| arginyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940456|gb|EGB36647.1| arginyl-tRNA synthetase [Escherichia coli E482]
 gi|323961931|gb|EGB57530.1| arginyl-tRNA synthetase [Escherichia coli H489]
 gi|324007268|gb|EGB76487.1| arginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|331039292|gb|EGI11512.1| arginine--tRNA ligase [Escherichia coli H736]
 gi|331056174|gb|EGI28183.1| arginine--tRNA ligase [Escherichia coli TA206]
 gi|331079599|gb|EGI50796.1| arginine--tRNA ligase [Escherichia coli H299]
 gi|332095145|gb|EGJ00176.1| arginyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|300951499|ref|ZP_07165334.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956611|ref|ZP_07168890.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300316593|gb|EFJ66377.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449249|gb|EFK12869.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1]
          Length = 577

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|291533470|emb|CBL06583.1| Arginyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 166

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 1/157 (0%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN YL    +   L++++ +G EYG     +  ++ +E+VSANPTGP+HVGH R
Sbjct: 9   IAGPGFINFYLKSDVIYDTLANLLKAGSEYGNLPKQETPRIQVEYVSANPTGPLHVGHGR 68

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A  G  L +LM  +GY V+ EYYINDAG QI+ LALSV  RY + L   + + PE  Y 
Sbjct: 69  GAAFGSALVNLMRAAGYNVSSEYYINDAGKQIDNLALSVNARYLE-LLGKEVEFPENGYH 127

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           G  +    K +  K   + LN  +E+ L I K+ +++
Sbjct: 128 GQDIIETAKRIIAKDGDKYLNMSDEERLSIFKELALK 164


>gi|288906386|ref|YP_003431608.1| arginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832433|ref|ZP_07465586.1| arginine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979400|ref|YP_004289116.1| Arginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733112|emb|CBI14693.1| arginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425473|gb|EFM28592.1| arginine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179328|emb|CBZ49372.1| Arginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 563

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 155/622 (24%), Positives = 277/622 (44%), Gaps = 110/622 (17%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           + R++N + E+D     +++I++  ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 8   AERIQNIVPELD-----QEQIIN--LLEIPKNSDMGDLAF-PAFSLAKILRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +    K+D        A   +IN +L    +   +L  ++ +G +Y    +G+G  V I+
Sbjct: 60  VAE--KMDATGFEKIEAVGPYINFFLDKKSISADVLGQVIANGSDYASQDLGEGRNVAID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
             S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGD 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMK 243
           ++A+  +  D          LK   +  A+  +   L+    +W   ++  D    ++ +
Sbjct: 178 EEAVKAHPID--------ELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQ 229

Query: 244 IIRDD-LKALNIQHD-IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
             RD+ L   N  +D + +S D F+ G+      + +++D L  +G + E       S+ 
Sbjct: 230 WFRDESLVEFNRLYDELGVSFDSFN-GEAFYNDKMDEVVDILTEKGLLEE-------SQG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMI 353
            Q  ++++             ++ P L  KSDG+  Y   DLA   Y K  Y+  F   I
Sbjct: 282 AQVVNLEKY-----------GIEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKAI 328

Query: 354 YVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+G++ S + K+L+AV   +  E    I  +   LV   ++G   K+S R G+ I L  
Sbjct: 329 YVVGNEQSAHFKQLKAVLNEMGFEWNEDITHVPFGLVT--KEGK--KLSTRKGNVILLEP 384

Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQS 446
            + E                         VG  +++F  L        DFD    V  + 
Sbjct: 385 TIAEAVKRAEDQINAKNPNLADKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEG 444

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           +  P  YVQYA+AR +SI R+A+          F  +V    S  D    +++  + ++P
Sbjct: 445 ETGP--YVQYAHARIQSILRKAE----------FTPSVNQVYSLDDAESWEIVKLIQDFP 492

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLV 563
           R+I+ A    EP  +A +  +LA  F+ +++H R   E+P               RL L 
Sbjct: 493 RIIKRAADNFEPSIVAKFAINLAQSFNKYYAHTRILDESPERD-----------SRLALS 541

Query: 564 HAVASIINSGLNIIGVESPNEM 585
           +A A+++   L ++GVE+PNEM
Sbjct: 542 YATATVLKEALRLLGVEAPNEM 563


>gi|34497417|ref|NP_901632.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932057|sp|Q7NWM1|SYR_CHRVO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34103272|gb|AAQ59634.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 572

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 146/597 (24%), Positives = 254/597 (42%), Gaps = 114/597 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ L  +P  +AE +VA + +    D V IAG GFIN++L+P YL +  
Sbjct: 36  GDYQANGVMGAAKALKTNPRALAEKVVAALDLAGIADKVEIAGPGFINIHLAPEYLAR-R 94

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S   +   + G   + K  +V +E+ S N    MHVGH R +++GD LA +M + G++V 
Sbjct: 95  SEAALKDDKLGIAPV-KPLRVMVEYSSPNLAKEMHVGHLRSSIIGDALARVMEYVGHDVV 153

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP----EGYYPGVYLKHVGKE----LA 214
           R  ++ D G Q   L   +     +  +  D+DL     E +Y    ++    E     A
Sbjct: 154 RANHVGDWGTQFGMLVAYLV----ETRHAGDADLQLSDLETFYRNAKIRFDESEDFANTA 209

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSP 272
             Y  +L    EE  L + + + V   +K   D  + LN+  + +    E  ++  D  P
Sbjct: 210 RDYVVKLQGGDEE-VLKLWRQF-VDVSLKHCEDVYEKLNVGLKREHVRGESSYN--DDLP 265

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSD 328
           +  I+  L  +G + E                D  Q++F       + D+P+     K D
Sbjct: 266 V--IVQELREKGLLTED---------------DGAQVVFLDEFRTQE-DKPMGVIVQKKD 307

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G + Y   D+   + ++ E   D +IYV+ +  S +  ++  +      +KA       +
Sbjct: 308 GGFIYTTTDIGAVRYRHRELKLDRVIYVVDARQSQHFAQMFTIC-----RKAGFAPEAMK 362

Query: 388 L------VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD----- 436
           L      V +  DG P K   R+G  + L  +++E  ++   + ++  KN +L D     
Sbjct: 363 LEHVGFGVMMGDDGKPFKT--RSGGTVKLIELLNE--AEERAYALVSEKNPDLSDAQKRE 418

Query: 437 ------FDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIFP 473
                     K  + SK                  N   Y+QYAY R +S+FR+A+    
Sbjct: 419 IANAVGIGAVKYADLSKNRMSDYIFNWDTMLAFEGNTAPYLQYAYTRVQSVFRKAE---- 474

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D+D   R VI +      +E QL   LA++   + +      P+ L+ YLY +A++F 
Sbjct: 475 --DYDANARIVITE-----PAEKQLAAALAQFEDTLNSVVEGCYPHYLSLYLYQIATLFS 527

Query: 534 GHWSHGRENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                       RF +A     +  ++   RLQL    A  + +GL+++G++    M
Sbjct: 528 ------------RFYEACPILKSEGEVRASRLQLAALTAKTLRTGLDLLGIKVLESM 572


>gi|323968298|gb|EGB63705.1| arginyl-tRNA synthetase [Escherichia coli M863]
 gi|327253005|gb|EGE64659.1| arginyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 577

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDATVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEAFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|323977939|gb|EGB73025.1| arginyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 577

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEAFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|213969436|ref|ZP_03397573.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301382647|ref|ZP_07231065.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302060631|ref|ZP_07252172.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132698|ref|ZP_07258688.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213925807|gb|EEB59365.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 578

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 140/601 (23%), Positives = 252/601 (41%), Gaps = 99/601 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L +  ++  +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALASRLDA-ALADPQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKAAGLLVE-------SNGAQCVFLEE----FRTA---DDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
             P++  K+ G Y Y   DLA  + + +    D  +Y +    + + +++  VA  A   
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFV 360

Query: 376 EKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LR 411
            +  Q+  +    +          RDG  +K+        +RA   +           LR
Sbjct: 361 HEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKNPQVAEAELR 420

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+    
Sbjct: 421 SIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL--- 476

Query: 472 FPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                FD    +++   PQE E       L   LA++   + N      P+ L  YLYDL
Sbjct: 477 --GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYDL 527

Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A +F   + +    G ENP  +            RL+L       +  GL+++G+E+   
Sbjct: 528 AGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLER 577

Query: 585 M 585
           M
Sbjct: 578 M 578


>gi|330877954|gb|EGH12103.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 578

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 141/602 (23%), Positives = 253/602 (42%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L +  ++  +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALASRLDA-ALADPQLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D  +Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRALYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
             +  Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD    +++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|293364384|ref|ZP_06611110.1| arginine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702651|ref|ZP_07639603.1| arginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317230|gb|EFE57657.1| arginine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623767|gb|EFO02752.1| arginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 563

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L  ++     Y    IGK   + I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQDVITEKEHYADQTIGKQENIVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+      L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D LA +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   + E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D   +          S  D    ++I  L ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 DAAGNY---------SLNDAESWEIIKLLQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|218440177|ref|YP_002378506.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226701373|sp|B7KCT7|SYR_CYAP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218172905|gb|ACK71638.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 585

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 246/584 (42%), Gaps = 91/584 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N A+ L++PL   P TIAE I+  + I    +   IAG GFINL L  ++L  +L
Sbjct: 40  GDYQSNVALSLAKPLKQPPRTIAEQIIKALDISDLCEPPQIAGAGFINLTLKANFLENLL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + I       G        +V ++F S N    MHVGH R  ++GD +A ++ F G++V 
Sbjct: 100 AKIQKDS-RLGVEKASPSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y +AL   D+ L  G     Y K      A     E  
Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPEALTTADA-LNLGDLVAFYKK------AKVRFDEDE 211

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLA 281
            F E     +VK   +QA  K  R   + L           D  R +   I +I+D NL 
Sbjct: 212 TFKETARKEVVK---LQAGAKDTRHAWQLLC----------DQSRREFQVIYNILDVNLT 258

Query: 282 RQG-YVYEGILPPPKSKTTQKC----DMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYF 334
            +G   Y  +LP    +  ++     D   K +        +    PL+  KSD  Y Y 
Sbjct: 259 ERGESFYNPLLPEIVGQLDEEGLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYA 318

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY- 392
             DLA  K +  E   + +IYV  +  + +  ++  VA     KKA I     E+V +  
Sbjct: 319 TTDLAALKYRIKEDKAERIIYVTDAGQANHFAQVFQVA-----KKAGIIPENIEVVHVAF 373

Query: 393 -----RDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
                 DG   K+  R+GD I L+ ++DE                               
Sbjct: 374 GVVKGEDGK--KLKTRSGDTIKLKDLIDEAVAYARRDLEKRLAEDDRKESKDFINHVSQV 431

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  ++++  L    + + D+ F   K  + + N   Y+ YAYAR +SI R+    F  L
Sbjct: 432 VGISAIKYADL--SQNRISDYVFSYDKMLALQGNTAPYMLYAYARIQSISREGNIDFEKL 489

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D     + ++ +E     +EL L  +L ++  VIE+  I   P +L  YLY+L+  F+  
Sbjct: 490 DEK--AKVILSEE-----TELALGKYLLQFTEVIEDVEINLLPNRLCEYLYELSKKFNKF 542

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +    P L+    +   +   RL L    A  +  GL+++G+
Sbjct: 543 YENC---PVLK----SEDPIKTSRLILCDLTARTLKLGLSLLGI 579


>gi|126459062|ref|YP_001055340.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248783|gb|ABO07874.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 629

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 244/571 (42%), Gaps = 116/571 (20%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  ++   G  YG ++   G+ + +E  SANP  P+H+GH R A++GD+LA L+ F G +
Sbjct: 89  VFDAVAEMGRRYGSDVCPGGSFL-VEHTSANPVHPLHIGHGRNAILGDSLARLLKFCGAK 147

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLKHVGKELAD-- 215
           V   +Y++D G Q+   A+     Y+         +  G  P +   Y+      +A+  
Sbjct: 148 VETHFYVDDCGVQVMYAAIG----YRAVRKEAAEAVARGAKPDLVVGYIYSATNAVAEIN 203

Query: 216 KYSSELLNFPEEK-----------WLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFIS 261
           +   EL    EE+           W+ ++K   D     + K++ + L   ++  +    
Sbjct: 204 RLKKELTAAGEEEKKREIIAQIDEWVAVLKRLMDVEGGLVNKVV-EVLGQRDVAQEAVEL 262

Query: 262 EDDFHRGDPSP---IRDIID--------NLARQGY------------VYEG----ILPPP 294
              +  GD      +R+++D         LAR G             V+ G    I+   
Sbjct: 263 NRRYEAGDAEAREAVREVVDLVLRGQRETLARLGIEIDYWDYESDISVWSGEAMRIVREL 322

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDD------VDRP-------LLKSDGSYTYFAADLAYF 341
           + +  Q  +     ++FR+    +D      +D P       L +SDG+  Y   D+AY 
Sbjct: 323 QRRWPQYVENKGGAVVFRADKFAEDFKLHEVLDLPKFIPPVTLTRSDGTTLYVTRDVAYA 382

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL--LCELVRLYRDGMPIK 399
             +++RG   +I V+ ++ +     +  +  A+  + A  NV+    E+V L       K
Sbjct: 383 LWQWKRGLGKVIRVVSTEQTHEQAHVRIILYALGHEDAAKNVVHYAYEMVNL----PGAK 438

Query: 400 MSKRAGDFITLRHVVDE-----------------------VGSDSVRFMMLWRKNSELLD 436
           MS R G +I+L  ++DE                       VG  SVR+  L     + ++
Sbjct: 439 MSARRGQYISLDEILDEAAERSAALVKEANPEVAGVIAERVGVGSVRYAFLSTGPRKPIE 498

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           F +  V    ++N   ++QY Y R  SI    QA    P++     P  ++P+E      
Sbjct: 499 FKWDAVLNM-RQNSGPFLQYTYVRAYSILEKAQAPPARPEI-----PGEMLPEEK----- 547

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L+V +AE+P V++ A  A  P  +A YL  LA VF+ ++      P L+        
Sbjct: 548 --TLVVKVAEWPTVVKEAFQALRPDYVAEYLDGLALVFNSYYEKA---PVLK----AEEP 598

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   RL LV+AV +++ +G  I+G+ +  +M
Sbjct: 599 LRGFRLALVNAVKTVLEAGFYILGIPTLTKM 629


>gi|333002986|gb|EGK22540.1| arginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333004491|gb|EGK24020.1| arginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333017865|gb|EGK37171.1| arginyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 577

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|331647473|ref|ZP_08348565.1| arginine--tRNA ligase [Escherichia coli M605]
 gi|330911686|gb|EGH40196.1| arginyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043197|gb|EGI15335.1| arginine--tRNA ligase [Escherichia coli M605]
          Length = 577

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILNAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|170683284|ref|YP_001743368.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218699552|ref|YP_002407181.1| arginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705377|ref|YP_002412896.1| arginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293405370|ref|ZP_06649362.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298381013|ref|ZP_06990612.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300899127|ref|ZP_07117409.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|301018279|ref|ZP_07182790.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331663376|ref|ZP_08364286.1| arginine--tRNA ligase [Escherichia coli TA143]
 gi|226701377|sp|B7NS42|SYR_ECO7I RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701379|sp|B7NBM7|SYR_ECOLU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701380|sp|B1LCZ5|SYR_ECOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170521002|gb|ACB19180.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218369538|emb|CAR17307.1| arginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218432474|emb|CAR13367.1| arginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284921796|emb|CBG34869.1| arginyl-tRNA synthetase [Escherichia coli 042]
 gi|291427578|gb|EFF00605.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298278455|gb|EFI19969.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357245|gb|EFJ73115.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300399749|gb|EFJ83287.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331059175|gb|EGI31152.1| arginine--tRNA ligase [Escherichia coli TA143]
          Length = 577

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 249/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L   +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|218695442|ref|YP_002403109.1| arginyl-tRNA synthetase [Escherichia coli 55989]
 gi|254782962|sp|B7L7S9|SYR_ECO55 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218352174|emb|CAU97913.1| arginyl-tRNA synthetase [Escherichia coli 55989]
          Length = 577

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANSVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|26248143|ref|NP_754183.1| arginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|170019779|ref|YP_001724733.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194439027|ref|ZP_03071110.1| arginyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209919302|ref|YP_002293386.1| arginyl-tRNA synthetase [Escherichia coli SE11]
 gi|227885696|ref|ZP_04003501.1| arginyl-tRNA synthetase [Escherichia coli 83972]
 gi|293446263|ref|ZP_06662685.1| arginyl-tRNA synthetase [Escherichia coli B088]
 gi|300994045|ref|ZP_07180664.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050768|ref|ZP_07197626.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|306814294|ref|ZP_07448460.1| arginyl-tRNA synthetase [Escherichia coli NC101]
 gi|312967079|ref|ZP_07781297.1| arginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331668572|ref|ZP_08369420.1| arginine--tRNA ligase [Escherichia coli TA271]
 gi|331677761|ref|ZP_08378436.1| arginine--tRNA ligase [Escherichia coli H591]
 gi|29427485|sp|Q8FGQ0|SYR_ECOL6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083533|sp|B1J0L2|SYR_ECOLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238065088|sp|B6I0S7|SYR_ECOSE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|26108547|gb|AAN80750.1|AE016762_3 Arginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|169754707|gb|ACA77406.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194421986|gb|EDX37990.1| arginyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209912561|dbj|BAG77635.1| arginyl-tRNA synthase [Escherichia coli SE11]
 gi|222033625|emb|CAP76366.1| Arginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227837269|gb|EEJ47735.1| arginyl-tRNA synthetase [Escherichia coli 83972]
 gi|281178946|dbj|BAI55276.1| arginyl-tRNA synthetase [Escherichia coli SE15]
 gi|291323093|gb|EFE62521.1| arginyl-tRNA synthetase [Escherichia coli B088]
 gi|300297585|gb|EFJ53970.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300406413|gb|EFJ89951.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|305852453|gb|EFM52904.1| arginyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553895|gb|ADN46670.1| arginine tRNA synthetase [Escherichia coli ABU 83972]
 gi|312288543|gb|EFR16445.1| arginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312946476|gb|ADR27303.1| arginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315290304|gb|EFU49680.1| arginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|323186348|gb|EFZ71698.1| arginyl-tRNA synthetase [Escherichia coli 1357]
 gi|323186757|gb|EFZ72077.1| arginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323972615|gb|EGB67818.1| arginyl-tRNA synthetase [Escherichia coli TA007]
 gi|324017993|gb|EGB87212.1| arginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331063766|gb|EGI35677.1| arginine--tRNA ligase [Escherichia coli TA271]
 gi|331074221|gb|EGI45541.1| arginine--tRNA ligase [Escherichia coli H591]
 gi|332343602|gb|AEE56936.1| arginyl-tRNA synthetase ArgS [Escherichia coli UMNK88]
          Length = 577

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|306826025|ref|ZP_07459361.1| arginine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431741|gb|EFM34721.1| arginine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 563

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 252/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L  ++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQDVITEKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+      L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D LA +G + E       S+  Q   +++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILAEKGLLVE-------SEGAQVVSLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   + E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D   +          S  D    ++I  L ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 DTAGNY---------SLNDAESWEIIKLLQDFPRIISRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|228476699|ref|ZP_04061368.1| arginyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251648|gb|EEK10745.1| arginyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 563

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 252/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++ L   P  IA  I  +I    + + V   G  +IN +
Sbjct: 26  LLETPKNADMGDVAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   +L  ++  G  Y    IG G  +  +  S N   P  +GH R  V+ D LA
Sbjct: 83  LDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++A  GY+  R  ++ D G Q   L ++   W  ++A+  N    P      +Y++   
Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   D    E       +W   ++  D    A+ +  RD+ L   N  +D      D + 
Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKAN---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F  +     S  D    ++I  + ++PR+I  A+   EP  +A +   LA  F+
Sbjct: 466 ------FTPSADATYSLNDVESWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A+++   L ++GVE+P+EM
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563


>gi|320194410|gb|EFW69041.1| Arginyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 577

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTYLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H   
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|331016037|gb|EGH96093.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 578

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 140/601 (23%), Positives = 252/601 (41%), Gaps = 99/601 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L +  ++  +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALASRLDA-ALADPQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKAAGLLVE-------SNGAQCVFLEE----FRTA---DDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
             P++  K+ G Y Y   DLA  + + +    D  +Y +    + + +++  VA  A   
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFV 360

Query: 376 EKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LR 411
            +  Q+  +    +          RDG  +K+        +RA   +           LR
Sbjct: 361 HEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKNPQVAEAELR 420

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+    
Sbjct: 421 SIARAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL--- 476

Query: 472 FPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                FD    +++   PQE E       L   LA++   + N      P+ L  YLYDL
Sbjct: 477 --GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYDL 527

Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A +F   + +    G ENP  +            RL+L       +  GL+++G+E+   
Sbjct: 528 AGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLER 577

Query: 585 M 585
           M
Sbjct: 578 M 578


>gi|262039672|ref|ZP_06012961.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746289|gb|EEY33839.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 577

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 259/602 (43%), Gaps = 96/602 (15%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           D+I I+       G   TN AM+ S+ LG +P  IA  I+   + +  ++ + IAG GFI
Sbjct: 26  DKIDIQNSTKKEFGDFQTNFAMVTSKILGKNPREIANEIIENFEKNDIIEKMEIAGPGFI 85

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+YL  S+L      I     +Y  + +     V I++ S N    MHVGH R  ++GD+
Sbjct: 86  NIYLKNSFLDNETKKI--GNEKYDFSFLDSDKTVIIDYSSPNIAKRMHVGHLRSTIIGDS 143

Query: 150 LASLMAFSGYE-VTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY------ 201
           L  ++ F G++ V  + ++ D G Q   L +    W  ++A   +  +  E  Y      
Sbjct: 144 LKRILQFLGFKKVLGDNHVGDWGTQFGKLIVGYNLWLNREAYEKDPIEELERIYVMFSDE 203

Query: 202 --PGVYLKHVGKELADKYSS--ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
                 L+ V +E   K  S  E+ N     W   + D S++   KI     K  +I  D
Sbjct: 204 AKKDPSLEDVAREELRKLQSGDEVNN---ALWREFI-DISIKEYNKI----YKRFDITFD 255

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E  ++  D  P+                +L   K K   K D D   + F     G
Sbjct: 256 YYNGESFYN--DLMPV----------------VLEELKEKNIAKQDEDALVVFF-----G 292

Query: 318 DDVD-RPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
           +D    P +  K DGS+ Y  +DLA  K + +    D  IYV+      + K++ ++A  
Sbjct: 293 EDTKLHPCIVQKKDGSFLYSTSDLATIKYRKDNLDVDLAIYVVDERQQDHFKQVFSIAKM 352

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE------ 416
           +        V +   +  + +G  + +S R G+ I L           + V+DE      
Sbjct: 353 IGAPYDYDKVHVWFGIMRFANG--VILSTRGGNVIRLIDLLDEAKKHVKKVIDEKNPDIP 410

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465
                     VG+ ++++  L +  +  + FD+ KV   +    P  Y+QY Y R  SI 
Sbjct: 411 EPEKEIIADIVGTGAIKYFDLSQNRTSPILFDWEKVLSFEGNTGP--YLQYTYVRIMSIL 468

Query: 466 R--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           R  ++++I  + + ++   N+   E E       L V L  +P+V+  +  +  P  +A 
Sbjct: 469 RKMESENISINKNGNIIFDNMQDVERE-------LAVALLRFPQVVVKSYESYRPNVIAD 521

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++LA +F+  ++     P L+     N +    R+ L    A I+  GL+++G+++ +
Sbjct: 522 YLFELAKLFNNFYNS---KPILK---EENAETMQARILLALKTAEILKQGLSLLGIQTVD 575

Query: 584 EM 585
            M
Sbjct: 576 RM 577


>gi|330964749|gb|EGH65009.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 578

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 252/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L + +       R   G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALASRLDAALADPPLSVRK-AGTAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D  +Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRALYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
             +  Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD    +++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|322375078|ref|ZP_08049592.1| arginine--tRNA ligase [Streptococcus sp. C300]
 gi|321280578|gb|EFX57617.1| arginine--tRNA ligase [Streptococcus sp. C300]
          Length = 563

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 252/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATDIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L  ++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQDVITEKDHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+      L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D LA +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   + E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D              S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 D---------TASNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAIGLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|229824015|ref|ZP_04450084.1| hypothetical protein GCWU000282_01319 [Catonella morbi ATCC 51271]
 gi|229786369|gb|EEP22483.1| hypothetical protein GCWU000282_01319 [Catonella morbi ATCC 51271]
          Length = 563

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 147/592 (24%), Positives = 256/592 (43%), Gaps = 94/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P    HG L+      L++     P  IA+ +  ++      D V   G  ++N +
Sbjct: 27  LIEVPSHAEHGDLAF-PVFQLAKVFRKAPQAIAQEVAEQVDASK-FDKVVAMGP-YVNFF 83

Query: 93  LS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   + + + L +++  G  YG++ +G+G  V I+  S N   PM +GH R  V+G++++
Sbjct: 84  LKRGAVVNETLHAVLEGGASYGQSDLGQGRNVVIDMSSPNIAKPMSMGHLRSTVIGNSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209
            ++A  GY+  R  ++ D G Q   L ++      +A    D   +L + Y         
Sbjct: 144 LILAKLGYQPVRVNHLGDWGTQFGKLIVAYQGWGDEATVKADPVKELVKLYVDFHEKAET 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRG 268
             EL D+  +      +        D  + A+ +  R++ LK     +D+   E D + G
Sbjct: 204 QPELEDQARAIFKRLED-------GDPEMLALWQWFREESLKEFQKVYDLLEVEFDSYNG 256

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + +I+D L  +G +                 +D    L     + D+   P L
Sbjct: 257 EAFYNDKMDEIVDLLEEKGLL----------------SVDNGATLVH---LEDETLPPAL 297

Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             KSDGS  Y   DLA   Y K  Y+  F   +YVMGS+ S + K+L+ V   +  + A+
Sbjct: 298 IKKSDGSTLYLTRDLATAYYRKRTYD--FAKNLYVMGSEQSVHFKQLQTVLEMMGNEWAK 355

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
            ++       +  +G   K+S R G  + L  V+ E                        
Sbjct: 356 -DMAHVPFGLITLNGK--KLSTRKGKIVLLEEVLKEAISLARQQIELKNPGLENKDQVAR 412

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ-AKDIFP 473
            VG  +V F  L  +     DF+  ++ + + +  P  YVQY +AR RSI  +  +++  
Sbjct: 413 QVGVGAVVFHDLKTERMNSFDFNLEEIVQFEGETGP--YVQYTHARSRSILSKYGQEVDL 470

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             +FDL            D    ++   LA+YPR+I  A    EP  +A YL  LA +F+
Sbjct: 471 SAEFDLS-----------DDYAWEVAKKLADYPRIIRQAGDRYEPSVVAKYLVQLAQLFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++    N R+    A     T  R+ LV AVA ++  GL+++G+ +P++M
Sbjct: 520 KYYA----NSRILDQDAG----TASRIALVAAVAQVLKDGLHLLGLHAPDKM 563


>gi|82543644|ref|YP_407591.1| arginyl-tRNA synthetase [Shigella boydii Sb227]
 gi|109895034|sp|Q322J5|SYR_SHIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81245055|gb|ABB65763.1| arginine tRNA synthetase [Shigella boydii Sb227]
 gi|332096695|gb|EGJ01686.1| arginyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 577

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 248/586 (42%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y     KH  +     E 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209

Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           A  Y  +L +  E   E W  +V     Q   +I  D L  + +  D  + E  ++   P
Sbjct: 210 ARNYVVKLQSGDEYFREMWHKLVDITMTQN--QITYDRLN-VTLTRDDVMGESLYNPMLP 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                I+ +L  +G   E       S+      +D     F++   G+ +   + K DG 
Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +  
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L
Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H 
Sbjct: 482 AAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|126656792|ref|ZP_01728006.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622012|gb|EAZ92720.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 585

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 256/592 (43%), Gaps = 89/592 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +   RD  HG    N A+ L++ LG +P  IA++I+  + ++   +S  I G GFINL L
Sbjct: 31  VTTARDLRHGDYQANIALPLAKKLGKNPREIAQIIINNLSLNNICESPTIGGPGFINLRL 90

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             SYL   L+S+       G   +    KV ++F S N    MHVGH R  ++GD +A  
Sbjct: 91  KSSYLESQLTSL-YQNQRLGIKKVENADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIART 149

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + F GY+V R  ++ D G Q   L   +   Y  AL   D+ L  G     Y +      
Sbjct: 150 LEFLGYDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADA-LEIGDLVNFYKQ------ 202

Query: 214 ADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKII---RDDLKALNIQHDIFISEDDF 265
           A K   E   F E     +VK       S+QA   +    R + + +  + ++ ++E   
Sbjct: 203 AKKRFDEDPKFQEAARDAVVKLQSGDKESLQAWQLLCDQSRREFQKIYDRLNVQLTE--- 259

Query: 266 HRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            RG+   +P + D+I  L +QG +        K +  Q C      L   +   GD +  
Sbjct: 260 -RGESFYNPYLDDVIKALDKQGIL-------EKDQGAQ-CVF----LEGFTNKSGDPLPL 306

Query: 323 PLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV------- 374
            + KSDG Y Y   DLA  + +  E     +IYV  +  S +  ++  VA          
Sbjct: 307 IVQKSDGGYNYATTDLAALRYRIKEDKAKRIIYVTDAGQSNHFAQVFQVAEKANFLPDTV 366

Query: 375 ---------------------SEKKAQINVLLCELVRLYRDGMP--IKMSKRAGDFITLR 411
                                S +  ++  LL E V   R  +   ++  +R      + 
Sbjct: 367 EVTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNYARKDLENRLQSEERQESAAFIN 426

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKD 470
           HV + VG  +V++  L +  + + D+ F   K  + + N   Y+ YAYAR +SI R+   
Sbjct: 427 HVSETVGISAVKYADLSQ--NRISDYIFSYDKMLALQGNTAPYMLYAYARIQSISREG-- 482

Query: 471 IFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
              ++D++    N+   + +E+E +    + ++ L+E  + +E   +   P +L  YLY+
Sbjct: 483 ---NIDYENLGENITILLKEETEIELG--KYLLQLSETIKEVEKTLL---PNRLCDYLYE 534

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           L+  F+  + +    P L+    ++  +   RL L    A  +  GL+++G+
Sbjct: 535 LSKKFNRFYENC---PVLK----SDEPVKTSRLLLCDLTARTLKLGLSLLGI 579


>gi|326334239|ref|ZP_08200462.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948030|gb|EGD40147.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 576

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 137/589 (23%), Positives = 243/589 (41%), Gaps = 98/589 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GHL +N  + L+ PLGL P  I   ++  + +  D+ +  +AG GF+NL  SP+ L + +
Sbjct: 40  GHLQSNLPLRLAGPLGLAPREIGTRLLDAVDLG-DLATAELAGAGFLNLTWSPAVLGEAV 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++      G        +V +++ S N    MHVGH R  V+GD+LA ++ ++G++V 
Sbjct: 99  GDLLTD-PHLGVPTPETPQRVVVDYSSPNVAKQMHVGHLRSTVIGDSLARVLTYAGHDVV 157

Query: 163 REYYINDAGAQINTLALSVFWR-------------------YQQALYNNDSDLPEGYYPG 203
           R+ ++ D G Q   L   +                      YQ+A    D D   G+   
Sbjct: 158 RQNHLGDWGTQFGMLVEELLGEDLHDPAAVAGLDMSELLALYQRAKARFDDD--PGFAAS 215

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
              + V  +  D  +  L       W         QA+++    + +    +  + ++ D
Sbjct: 216 ARRRVVALQSGDPTTLAL-------W---------QALVEASLAEFETTYSRLGVLLTRD 259

Query: 264 DF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DD 319
           DF    R +P  +  ++D+L   G + E                   Q+++     G D 
Sbjct: 260 DFDGESRYNPQ-LPGVVDDLRASGLLTESA---------------GAQVVYPDGFAGRDG 303

Query: 320 VDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
              PL+  K+DG + Y A DLA  + + +    D ++YV+    S +   + AVA A   
Sbjct: 304 APLPLIVRKADGGFGYAATDLATIRHRVDDLAVDRVVYVVDHRQSHHFDMVFAVARAAGW 363

Query: 377 KKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEV-----------------G 418
               + V        L  DG P K   R+G+ +TL  ++D+                   
Sbjct: 364 LPDSVEVQHIGFGTVLGADGRPFK--TRSGETVTLTSLLDDAEEAVAARYDNPEVVRAVA 421

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDF 477
           + +V++  L    +    FD  ++   + E    Y+QYA+AR  SI  QA +  +P    
Sbjct: 422 NAAVKYADLSNHLARDYAFDLARMSATTGETGP-YLQYAHARVCSILAQAPQQTYPPTGS 480

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                  +        +E +L + L  +  V+       EP+ L  YLY L++     + 
Sbjct: 481 GHRAVGTLSHP-----AEQRLALELTGFATVVAKVADTLEPHHLTAYLYGLSTALTAFY- 534

Query: 538 HGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              EN P L+     + ++   RL L  A   +++ GL ++G+E+P  M
Sbjct: 535 ---ENCPVLK----ADGEVRQTRLALCEATRRVLSDGLRLLGIEAPRRM 576


>gi|323339717|ref|ZP_08079987.1| arginine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092796|gb|EFZ35398.1| arginine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 565

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 149/597 (24%), Positives = 261/597 (43%), Gaps = 105/597 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P+    G  +   A +L++ L   P  IA+ +V   KID        A   ++N +L
Sbjct: 29  IETPKSLNLGDYAF-PAFVLAKVLRKAPQMIAQDLVE--KIDHAGFEKIEAVGPYVNFFL 85

Query: 94  SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +   +L  ++  G  +G    GKG  V I+  S N   PM +GH R  V+G+++A 
Sbjct: 86  DKKDFSADVLGDVISKGASFGDADEGKGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSIAQ 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           L+  +GY+  +  ++ D G Q   L  +   W  ++ +     D    YY   + + V  
Sbjct: 146 LLEKTGYKPVKINHLGDWGTQFGKLMCAYKLWGSEEEVKKAPIDSLLRYYVRFHEEDVDH 205

Query: 212 ELADKYSSELLNFPEE---------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
              D+ + E     E+         KW    ++ S++  M++       L+I+ D +  E
Sbjct: 206 PELDEEAREWFKRLEDGDEEATKLWKWF---REESLKVFMRV----YDRLDIKFDSYNGE 258

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++      + ++++ L  +  ++E       S+  Q  D+ +  L             
Sbjct: 259 AFYN----DKMDEVVEMLEAKNLLHE-------SQGAQIVDLSKYDL------------N 295

Query: 323 PLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           P L  K+DG+  Y   DLA   Y K  YE  F   +YV+G++   + K+L+AV   +   
Sbjct: 296 PALIKKTDGATLYITRDLAAAIYRKRTYE--FAQSLYVVGNEQKNHFKQLKAVLKEMGYD 353

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            +  ++       + +DG   K+S R+G  + L  V+D+                     
Sbjct: 354 WSD-DIHHIPFGLITKDGK--KLSTRSGRIVLLEEVLDDAVKLAQKQIEEKNPALENKAE 410

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
               VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY++AR  SI R+A 
Sbjct: 411 VAEAVGVGAVVFHDL--KNDRLNNFDFNLEEVVRFEGETGP--YVQYSHARAMSILRKAG 466

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +  P+LD           +   D SE  + +  LA++P  +  A    EP  +A Y   L
Sbjct: 467 N--PELD--------AAGKYRLDDSEAWETLRLLADFPATVLKAVEEYEPSVIAKYGIHL 516

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H       R ++ +++K    RL LV +VA ++   L ++GV++P+EM
Sbjct: 517 AKAFNRYYAHS------RILEDDDQKEA--RLALVKSVAEVLKESLRLLGVKAPDEM 565


>gi|306826468|ref|ZP_07459779.1| arginine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431327|gb|EFM34325.1| arginine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 563

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 257/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++ A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ + +  RL L +A A+++   L ++GV++PNEM
Sbjct: 522 YAH------TRILDDNSERDS--RLALCYATATVLKEALRLLGVDAPNEM 563


>gi|289167053|ref|YP_003445320.1| arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS)
           [Streptococcus mitis B6]
 gi|288906618|emb|CBJ21452.1| arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS)
           [Streptococcus mitis B6]
          Length = 563

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVITEKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLKEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 E-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           + + +          S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 ETEANY---------SLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   ENP               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDENPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|171778540|ref|ZP_02919667.1| hypothetical protein STRINF_00519 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282763|gb|EDT48187.1| hypothetical protein STRINF_00519 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 563

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 257/595 (43%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L+R L   P  IA  I    K+D        A   +IN +
Sbjct: 26  LLEVPKNSDMGDLAF-PAFSLARILRKAPQMIAAEIAE--KMDTAGFEKIEAVGPYINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L    +   +L  ++ +G +Y     G G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKKSISADVLGQVIANGSDYASQDEGHGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY+  +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGDEEAVKAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALN-IQHDIFISEDDFHRG 268
           K   D+ + E     E        D    ++ +  RD+ L   N + +++ +S D F+ G
Sbjct: 203 KPELDEEAREWFRKLE------AGDEEAISLWQWFRDESLVEFNRLYNELGVSFDSFN-G 255

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + +++D L  +G + E       S+  Q  ++++             ++ P L
Sbjct: 256 EAFYNDKMDEVVDILTEKGLLEE-------SQGAQVVNLEKY-----------GIEHPAL 297

Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKA 379
             KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV   +  E   
Sbjct: 298 IKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLNEMDFEWNE 355

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
            I  +   LV   ++G   K+S R G+ I L   + E                       
Sbjct: 356 DITHVPFGLVT--KEGK--KLSTRKGNVILLEPTIAEAVKRAEDQINAKNPNLADKEAIA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+AK    
Sbjct: 412 HAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKAK---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F  +V    S  D    +++  + ++PR+I+ A    EP  +A +   LA  F+
Sbjct: 466 ------FTPSVNDVYSLDDAESWEIVKLIQDFPRIIKRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A+++   L ++GVE+PNEM
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATATVLKEALRLLGVEAPNEM 563


>gi|257126716|ref|YP_003164830.1| arginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050655|gb|ACV39839.1| arginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 573

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 250/599 (41%), Gaps = 92/599 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +++I I+       G   TN AM+ S+ +G +P  IA  I+   + +  ++ + +AG GF
Sbjct: 25  IEKIDIQNSTKKEFGDFQTNFAMMSSKLIGKNPREIANTIIENFEKNDIIEKLEVAGPGF 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN++L  S+L + +  +     +Y  + +     V I++ S N    MH+GH R  ++GD
Sbjct: 85  INIFLKNSFLNEEIKKL--ENEKYDFSFLNIDKTVIIDYSSPNIAKRMHIGHLRSTIIGD 142

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++  ++ F G++   + +I D G Q   L ++      +  Y  D   P G    +Y+  
Sbjct: 143 SIKRILNFLGFKTLADNHIGDWGTQFGKLIVAYKNWLDKKAYEED---PIGELERIYVLF 199

Query: 209 VGK-----ELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             K      L D+   EL  L    E    + K++ +   +K      + L++  D +  
Sbjct: 200 SDKAKKDPALEDEAREELKKLQLGNEDNQKLWKEF-IDISLKEYNKVYERLDVNFDYYYG 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++   PS                  +L   K K   + D     + F      DD  
Sbjct: 259 ESFYNDMMPS------------------VLEELKKKNIAREDQGALVVFFE-----DDKL 295

Query: 322 RPLL--KSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-- 376
            P +  K DGS+ Y  +DLA  K  K E   D  +Y+       + K++  +   + E  
Sbjct: 296 PPAIVQKKDGSFLYTTSDLATMKFRKNELKVDEAVYLTDDRQQNHFKQVFEIGKMLGEPY 355

Query: 377 --KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
             KK  I      +  + R G  I  S R+G+ I L  ++DE                  
Sbjct: 356 DYKKTHI------VFGIMRFGDQI-FSSRSGNTIRLVDLLDEAKKQVKKVIDEKNPNIPE 408

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466
                    +GS ++++  L +  +  + F + KV   +    P  Y+QY Y R  SIFR
Sbjct: 409 EEKEKIAETIGSGAIKYFDLSQNRTSDITFTWEKVLNFEGNTGP--YLQYTYVRIMSIFR 466

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           + ++       ++   N+     E D  E +L   L ++P+ +  +     P  +A YL+
Sbjct: 467 KLEEE------NINVENMDIVLDEMDGIERELASELLKFPQAVVKSYENFRPNIIADYLF 520

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           D A +F+  ++          ++  ++++   R+ L    A ++  GL ++G+++ N M
Sbjct: 521 DTAKLFNSFYNSS------SILKEEDKQVMDARILLAKKTAFVLKEGLELLGIKTVNRM 573


>gi|218689874|ref|YP_002398086.1| arginyl-tRNA synthetase [Escherichia coli ED1a]
 gi|254782963|sp|B7MW70|SYR_ECO81 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218427438|emb|CAR08336.2| arginyl-tRNA synthetase [Escherichia coli ED1a]
          Length = 577

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 247/586 (42%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y     KH  +     E 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209

Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           A  Y  +L +  E   E W  +V     Q   +I  D L  + +  D  + E  ++   P
Sbjct: 210 ARNYVVKLQSGDEYFHEMWRKLVDITMTQN--QITYDRLN-VTLTRDDVMGESLYNPMLP 266

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                I+ +L  +G   E       S+      +D     F++   G+ +   + K DG 
Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +  
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L
Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H 
Sbjct: 482 AAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|82776478|ref|YP_402827.1| arginyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309789294|ref|ZP_07683885.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|109895035|sp|Q32H69|SYR_SHIDS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81240626|gb|ABB61336.1| arginine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|308922829|gb|EFP68345.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 577

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 251/588 (42%), Gaps = 92/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + S      + +G  T     + +++ + N    MHVGH R  ++GD     + F G
Sbjct: 97  QQALAS------DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLG 150

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELA 214
           ++V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A
Sbjct: 151 HKVIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------A 196

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSP 272
            K+  E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + + 
Sbjct: 197 KKHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTL 250

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDG 329
            RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG
Sbjct: 251 TRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDG 309

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLL 385
            Y Y   D+A  K +YE    + ++Y + S    ++ +  A+   A  V E     + + 
Sbjct: 310 GYLYTTTDIACAKYRYETLHAERVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMF 369

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
             +  L +DG P K   RAG  + L  ++DE                           VG
Sbjct: 370 GMM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D +
Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEE 479

Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L    VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + 
Sbjct: 480 QLAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYE 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 536 H------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|307710942|ref|ZP_07647367.1| arginyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617243|gb|EFN96418.1| arginyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 563

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 251/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  +    KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATELAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVITQKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDDEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETASNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   ENP               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDENPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|270262239|ref|ZP_06190511.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044115|gb|EFA17207.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 576

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 136/582 (23%), Positives = 253/582 (43%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      V IAG GFIN++L+  ++ + +
Sbjct: 37  GDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDIASKVEIAGPGFINIFLNGEWVAQQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              V++  + G   + + T V I++ + N    MHVGH R  ++GD  A    F G++V 
Sbjct: 97  DQ-VLNAPKLGIAPVKQQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+        Y +      A K+  E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDMGLSDLEQFYRE------AKKHYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQH---DIFISEDDFHRGDP--- 270
             F E     +VK      Y ++   K++   +    + +   ++ ++EDD   G+    
Sbjct: 204 AEFAERARAYVVKLQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDV-MGESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + + +I+ +L  +G   E       S+      +D  Q        G+ +   + K DG 
Sbjct: 263 AMLPEIVADLKAKGLAVE-------SEGATVVFLDEYQ-----NKDGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + S    +       V++   +  ++S +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +++S        RAG  I           ++H+ + VG  +V+
Sbjct: 371 MMLGKDGKPFKTRAGGTVRLSDLLDEAIDRAGKLIAEKNPDMPAEEMQHLANVVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R  S+F++A      LD +     
Sbjct: 431 YADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVASVFKRA-----GLDENSLTLP 484

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E      E+ L   L ++  VI        P+ +  YLYDLA +F G + H     
Sbjct: 485 LVMTEER----EIALATRLLQFEEVITTVARDGTPHVMCTYLYDLAGLFSGFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + A++ +    RL+L    A  + +GL+ +G+++   M
Sbjct: 536 -CQILNADSEEARQSRLKLALLTARTLKTGLDTLGIDTVERM 576


>gi|237731911|ref|ZP_04562392.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226907450|gb|EEH93368.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 577

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 144/588 (24%), Positives = 244/588 (41%), Gaps = 92/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P +L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPVFLAQHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  QQALASD-RLGVTQPAKQTVV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q   +  R+  + L    DI +S++   + R + +  RD 
Sbjct: 201 DEDEAFAERARSYVVK---LQGGDEYFREMWRKLV---DITMSQNQLTYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385
              D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMML 373

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                  +DG P K   RAG  + L  ++DE                           VG
Sbjct: 374 G------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D  
Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDES 479

Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L    V+  E      E QL   L ++   +        P+ +  YLYD+A +F G + 
Sbjct: 480 ALANAQVVISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYE 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 536 H------CPILSAENEEIRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|77405110|ref|ZP_00782209.1| arginyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410827|ref|ZP_00787184.1| arginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77163045|gb|EAO73999.1| arginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77176253|gb|EAO79023.1| arginyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 563

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 26  LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     E        D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +  + E       SK  Q  ++++             ++ P L 
Sbjct: 257 AFYNDKMEEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                        A +S +K  + +LL   V    +    ++  +  +      V   VG
Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A   F   + 
Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  N        D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++
Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563


>gi|119943800|ref|YP_941480.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166232827|sp|A1SQW6|SYR_PSYIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119862404|gb|ABM01881.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 582

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 145/625 (23%), Positives = 264/625 (42%), Gaps = 108/625 (17%)

Query: 16  KEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           + I C IK E     I  RI I+R +D +HG  + N A++L++P   +P  +AELI+A I
Sbjct: 11  QAIVCLIKQEIIPADIQPRINIDRTKDKSHGDYANNLALMLAKPAKQNPRHLAELIIANI 70

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
                V  + IAG GFIN +++P++L K +    +        +      + I++ S N 
Sbjct: 71  PESTLVIKMEIAGPGFINFFINPNFLEKQIDGAYLDK-RLNVQIEANPQTIVIDYSSPNL 129

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI------------------ 174
              MHVGH R +++GD +A  + F G  V R+ ++ D G Q                   
Sbjct: 130 AKEMHVGHLRSSIIGDAVARTLEFKGNNVVRQNHVGDWGTQFGMLLAYMEELRAKGEPIE 189

Query: 175 NTLA-LSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKE---LADKYSSELLNFPEEKW 229
           N LA L +F+R  +  ++   D      +  V L+   K+   L  K++   L+  +E +
Sbjct: 190 NNLANLEIFYRAAKGRFDESEDFATRARHLVVKLQGGNKDCLKLWAKFNETSLSHCQETY 249

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +         + + R D++  +  +D               +  ++++L +QG + + 
Sbjct: 250 QRL--------GVSLTRADVRGESSYND--------------QLAVVVEDLDKQGLLQQ- 286

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348
                 S+  +   +D     F++   GD +   + K DG + Y  +DLA  + +  E  
Sbjct: 287 ------SQGAKCVFLDN----FKNKE-GDPLPVIIQKKDGGFLYATSDLAAMRYRQNELN 335

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLCELVRLYRDGMPIKMSKRA- 404
            D ++Y + +    + +++  VA +   V+EK +  ++    +  +  DG P K    A 
Sbjct: 336 ADRILYFVDARQGLHFQQVFEVARSAGFVNEKTSLEHMPFGTV--MGEDGRPFKTRSGAV 393

Query: 405 ---GDFIT---------------------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
               D +T                     LRH+   VG  SV++  L +  +    F F 
Sbjct: 394 AKLADLLTEAEVRAYELVKEKNKEMSEPELRHIASVVGISSVKYADLSKNRTSDYTFSFD 453

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +    + N   Y+ YAY R  SIF +A      +   +     + QE E D     L  
Sbjct: 454 SMLS-FEGNTAPYLLYAYTRVVSIFNKAGIEMGSVTAAV----SLTQEKEID-----LAN 503

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L ++  +I+       P+ L  YL++LA +F   +    E   +   +   +K +  RL
Sbjct: 504 KLIQFNDIIDQVAKQGMPHFLCSYLFELAGLFSSFY----EACPILIAETETQKQS--RL 557

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           +L    A  +  GL+++G+ +   M
Sbjct: 558 KLAGLTAKTLKQGLSLLGINTLERM 582


>gi|238021933|ref|ZP_04602359.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147]
 gi|237866547|gb|EEP67589.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147]
          Length = 570

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 137/587 (23%), Positives = 243/587 (41%), Gaps = 84/587 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++  +D   G    N  M  ++ L  +P  +A+ I   +  +P   +  +AG GFINL
Sbjct: 25  IALQPAKDAKFGDFQINGVMGAAKSLKQNPRELAQKIAGLLAANPLFTAAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+P ++   LS+   +    G   + K   V I++ S N    MHVGH R +++GD+LA
Sbjct: 85  RLNPEFIAAQLSA---ADSRLGVATVAKSKTVVIDYSSPNLAKEMHVGHLRSSIIGDSLA 141

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G++V R+ ++ D G Q   L   +  + Q       +DL E +Y    ++    
Sbjct: 142 RVLGFLGHKVIRQNHVGDWGTQFGMLVAYLAEQQQDDANFRLADL-EQFYRNAKVRFDED 200

Query: 212 E----LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           E     A +Y  +L    E    W     D S+Q   + + + L  L  + D+   E  +
Sbjct: 201 ENFANTAREYVVKLQGGDETVLSWWRKFVDISLQ-HAETVYEKLGLLLERGDV-AGESSY 258

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPL 324
           +      +++++D L + G                  D +  +++F   +   D D +P 
Sbjct: 259 N----DDLQNVVDELLQHGLA---------------VDDNGTKVMFLDELKNQDGDPQPF 299

Query: 325 L--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           +  K DG + Y   DLA  + +      D ++YV+ +  S + ++L A           +
Sbjct: 300 IIQKQDGGFLYATTDLACVRHRVRNLHADRILYVVDTRQSLHFQQLFAATRKAGWLPENV 359

Query: 382 NVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
                     + +DG P K   R+GD + L  ++DE                        
Sbjct: 360 EAEFIGFGTMMGKDGKPFKT--RSGDTVKLVELLDEATERATALVKEKNPELPADTAAQI 417

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+ R+A     
Sbjct: 418 GRAVGIGAVKYADLSKNRNSDYIFDWENMLS-FEGNTAPYLQYAYTRVQSVLRRAGAW-- 474

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                       P + + +  E QL V L ++  V+ +      P+ LA YLY LA++F 
Sbjct: 475 --------NETAPLQIK-EPLEQQLAVELLKFEDVLNSVAETSFPHYLANYLYQLAALFS 525

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
             +      P L+   A        RLQL       + +GL ++G+E
Sbjct: 526 RFY---EACPILKAEGATRD----TRLQLAKLTGETLKTGLGLLGIE 565


>gi|145591957|ref|YP_001153959.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166232828|sp|A4WLP0|SYR_PYRAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145283725|gb|ABP51307.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 630

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 251/588 (42%), Gaps = 108/588 (18%)

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVS-----GIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           +I+G     LY++     K L  +V       G +YG     +     +E  SANP  P+
Sbjct: 67  YISGLSAEGLYVNADLNAKRLGELVFEAVAKMGKKYGFTEECQLGSFLVEHTSANPIHPL 126

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL---SVFWRYQQALYNND 193
           H+GH R A++GD+LA L+ F    V   +Y++D G Q+    +   +V    ++ +    
Sbjct: 127 HIGHGRNAILGDSLARLLRFCDNRVEVHFYVDDCGVQVMYATIGYNAVRDEAREWIERAK 186

Query: 194 SDLPEGYY---------PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMM 242
            DL  G+           G   K   +   D++   L+   +E W+ ++K    S   ++
Sbjct: 187 PDLVVGHIYSATNAVAEIGRLKKEAERAQDDEHKRSLIGEIDE-WVAVLKRLMESEGDLV 245

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDIID--------NLARQGY------ 285
             + + L   ++  +       +  GDP     +R+++D         LAR G       
Sbjct: 246 AKVVERLGQRDVAGEAVELNRRYEAGDPEAKRVVREVVDLVLRGQRETLARLGIEIDRWD 305

Query: 286 ------VYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDD------VDRP------ 323
                 V+ G    I+   + +  Q  +     ++FR+    DD      +D P      
Sbjct: 306 YESELAVWSGEASRIVEELQRRWPQYVEYKGGAVVFRADKFVDDFKLWDVLDLPKFIPPV 365

Query: 324 -LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQ 380
            L +SDG+  Y   D+AY   +  +GFD ++ V+ ++  H     R+   A    +   +
Sbjct: 366 TLTRSDGTTLYVTRDVAYALWQARQGFDKVVRVISTEQTHEQAHVRIILYALGFEDVAKK 425

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------V 417
           I     E+V L   GM  KMS R G +I+L  ++DE                       V
Sbjct: 426 IVHYAYEMVNL--PGM--KMSARRGRYISLDEILDEAAERSASLVKEKSPEIAGVIAEKV 481

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  SVR+  L     + ++F + +V    ++N   ++QY Y R  SI  +A    PD++ 
Sbjct: 482 GVGSVRYAFLSTSPRKPIEFRW-EVVLNLRQNSGTFLQYTYVRAYSILEKA----PDVER 536

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  ++ +E E       L+V +AE+P V+  A  A  P  +A YL  LA +F+ ++ 
Sbjct: 537 ASVPEQMLEEEKE-------LLVKIAEWPSVVREAVRALRPDYVAEYLDGLALLFNSYYE 589

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                P L+ V+   +     R+ LV+AV +++ +G  I+G+ +  +M
Sbjct: 590 KA---PVLKAVEGVRK----FRIALVNAVKTVLEAGFYILGIPTLTKM 630


>gi|322412861|gb|EFY03769.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 563

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 258/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  D       +A   +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIAGELAEQI--DASQFEKVVAVGPYINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++ A  GY+  +  ++ D G Q   L ++   W  + A+  +  D          LK   
Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPID--------ELLKLYI 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   ++    +W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 195 RINAEAETDPTVDGEAREWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLNVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + ++++ L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLELLETKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ + +  RL L +A A+++   L ++GVE+PNEM
Sbjct: 522 YAH------TRILDDNSERDS--RLALCYATATVLKEALRLLGVEAPNEM 563


>gi|187736645|ref|YP_001878757.1| arginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426697|gb|ACD05976.1| arginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 585

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 245/596 (41%), Gaps = 95/596 (15%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           D   G   +NAAM+L++    +P  +A+ +  RI  D  V S+ IAG GFIN  + P + 
Sbjct: 36  DLRFGDYQSNAAMVLAKRCRTNPRALAQQVADRIGQDA-VCSLEIAGPGFINFRIRPEFY 94

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              L +++      G   +     + I+F + N   PMHVGH R  ++GD L+ +  F G
Sbjct: 95  AARLLAMLADD-RLGVEKVQAPKTIVIDFSAPNVAKPMHVGHIRSTIIGDALSRVARFVG 153

Query: 159 YEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSDLPEGYYPGVYLKHVGK-E 212
           + V  + +I D G Q       + W +     +QAL  N  D     Y  V L    K E
Sbjct: 154 HHVITDNHIGDWGTQFGM----ILWGWKNILDEQALAANPIDELLRVYKDVNLMCKEKPE 209

Query: 213 LADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
           L D   +EL  L   + + L I K   + S   + KI       L+I  D ++ E  F+ 
Sbjct: 210 LLDTCKAELVKLQAGDGENLAIWKRCVEVSKSGLSKI----YDQLDIHFDYWLGE-SFYN 264

Query: 268 GDPSPIRD--IIDNLARQG-----YVYEGILPPPKSK--TTQKCDMDRKQLLFRSTMVGD 318
              +P+ D  I   +AR+         +G +PP +       K +      + R      
Sbjct: 265 DALAPLVDGMIAAGMARESDGAICVFSDGSVPPNEDPFLVQDKGEWRANPCIIR------ 318

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
                  K+DG + Y   DLA    +    G D++ YV+G+  + + +++ +        
Sbjct: 319 -------KADGGFLYATTDLATLDHRIRTWGADSIWYVVGAPQALHFRQIFSTQRRRGMD 371

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
               ++    +  L  D  P K   R+GD ++L+ V+DE                     
Sbjct: 372 GDYRHIAFGSI--LGDDRKPFKT--RSGDTVSLQDVLDEAIERAARVVEEKSPDMPDEEK 427

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK 469
                 VG  +V+F  L +       F++ K+   Q    P  Y+Q +Y R RSIFR+  
Sbjct: 428 KRVAEVVGIGAVKFAELSQNRMTDYVFNWDKMLALQGDTAP--YLQNSYVRVRSIFRK-- 483

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                LD      +   Q SE   +E+ L   LA Y  V+        P  LA YL+DLA
Sbjct: 484 -----LDGGPLDWSAPIQLSE--DAEIHLARLLARYGEVVPQVLDDCRPNVLAAYLFDLA 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             FH  +      P L+    +   +   RL L    A  +  GL ++G++ P+ M
Sbjct: 537 RAFHSFYE---ACPVLK----SEGPVRHSRLALCELTARTLKHGLGLLGIQLPDRM 585


>gi|22538237|ref|NP_689088.1| arginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798536|ref|ZP_00780769.1| arginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414025|ref|ZP_00790196.1| arginyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|38372522|sp|Q8DWV9|SYR_STRA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22535150|gb|AAN00961.1|AE014287_1 arginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586100|gb|EAO62625.1| arginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159907|gb|EAO71047.1| arginyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 563

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 26  LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     E        D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +  + E       SK  Q  ++++             ++ P L 
Sbjct: 257 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                        A +S +K  + +LL   V    +    ++  +  +      V   VG
Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A   F   + 
Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FSPSNS 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  N        D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++
Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563


>gi|161502977|ref|YP_001570089.1| arginyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189083545|sp|A9MNC4|SYR_SALAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|160864324|gb|ABX20947.1| hypothetical protein SARI_01039 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 577

 Score =  120 bits (300), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 144/588 (24%), Positives = 242/588 (41%), Gaps = 92/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLDPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G +   + T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  QQALASD-RLGVSQPARQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK  S  A  + +   L       DI ++++   + R + +  RD 
Sbjct: 201 DEDEGFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385
              D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMML 373

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                  +DG P K   RAG  + L  ++DE                           VG
Sbjct: 374 G------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D  
Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQ 479

Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L    VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + 
Sbjct: 480 ALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYE 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H         + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 536 H------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|19746992|ref|NP_608128.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|23822183|sp|Q8NZ22|SYR_STRP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19749247|gb|AAL98627.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 563

 Score =  120 bits (300), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 257/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D          LK   
Sbjct: 143 HIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   ++    +W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 195 RINAEAETDPTIDEEAREWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563


>gi|71904479|ref|YP_281282.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|94991409|ref|YP_599509.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|109895043|sp|Q48QT3|SYR_STRPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123257889|sp|Q1JEG8|SYR_STRPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71803574|gb|AAX72927.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|94544917|gb|ABF34965.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 563

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKTKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHS 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563


>gi|116492437|ref|YP_804172.1| arginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266099|sp|Q03GE2|SYR_PEDPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116102587|gb|ABJ67730.1| arginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 562

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 264/587 (44%), Gaps = 87/587 (14%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P++   G  +      L++ L   P  IA  +V +I  D   + V +AG  +IN +L
Sbjct: 28  IEIPKESKMGDYAF-PTFTLAKVLRKAPQMIASELVEKIDQD-QFEKVEVAGP-YINFFL 84

Query: 94  SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  ++L +++    EYG+N  G    V I+  S N   P+ +GH R  V+G++L+ 
Sbjct: 85  DKTAFGAEVLGTVLSQKAEYGQNDDGNQGNVPIDMSSPNIAKPISMGHLRSTVIGNSLSL 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +M+ +GY   +  ++ D G Q   L  +   W  ++ +  +  +    YY   +     K
Sbjct: 145 IMSKNGYNPIKINHLGDWGTQFGKLITAYKLWGSEEEVKADPINKLLEYYVRFH-----K 199

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFHRG 268
           E  D+   EL +   + W   ++D   +AM   +  R++ LK+    +D      D ++G
Sbjct: 200 E--DQEKPELDDIARD-WFKKLEDGDEEAMNLWQWFREESLKSFKQIYDKLGITFDSYKG 256

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + +I+  L  +G + E       S+  Q  D+++  L             P L
Sbjct: 257 EAFYNDKMDEIVQILEDKGLLKE-------SQGAQVVDLEKYNL------------NPAL 297

Query: 326 --KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV------------ 370
             K+DG+  Y   DLA    +Y    F+  +YV+G++ + + K+L+AV            
Sbjct: 298 IKKTDGATLYITRDLAAALYRYRTYDFNQSLYVVGAEQTNHFKQLKAVLKEMGFDWSDDV 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +  ++ VLL E++         +++ +  D      V  EVG 
Sbjct: 358 HHIPFGLITLNGKKLSTRSGRV-VLLDEVLNDAVSLAKKQINDKNPDLANADTVAKEVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            +V F  L  + +   DF+    V+ + +  P  YVQY+ AR  SI R+A D+      +
Sbjct: 417 GAVIFHDLKNERTNSFDFNLEDVVRFEGETGP--YVQYSRARAESILRKAGDV------E 468

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            F +  I     +DT     +  L ++P +++ A    EP  +A Y   LA  F+ ++++
Sbjct: 469 EFAQLNITDPKAWDT-----LKALQDFPNIVKRAAAQYEPSVIAKYALGLAKAFNKYYAN 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       + A++ + T  RL LV +V+ ++   L ++GV++P+EM
Sbjct: 524 SK-------ILADDEEKT-ARLALVKSVSIVLEESLRLLGVKAPDEM 562


>gi|13542151|ref|NP_111839.1| arginyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|14325582|dbj|BAB60485.1| tRNA synthetase Arg [Thermoplasma volcanium GSS1]
          Length = 545

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 131/584 (22%), Positives = 255/584 (43%), Gaps = 107/584 (18%)

Query: 40  CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99
             H   +     ++++P G + +   E ++ +I+   ++    +   G+IN+YL     R
Sbjct: 31  TGHSDFTVRVFRLINQPDGREKI---EKMIEKIRTIENISGAKLEN-GYINIYLDK---R 83

Query: 100 KILSSIVVSGIEYGR--NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            +L  ++    +YG+  +   +  +V++E  SANPTGP+H+G  R +++GD+++ L+   
Sbjct: 84  GVLRYLLDYVEKYGKYPDTFQEPERVSVEHTSANPTGPLHIGRARNSIIGDSISRLLGRF 143

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNN----DSDLPEGYYPGVYLK-HVGKE 212
           GY VT++Y++ND+G Q+    LS++  Y++  YN     D+ L +  Y  +Y +    K 
Sbjct: 144 GYRVTKQYFVNDSGKQM----LSLYTAYEK--YNGPMTMDNLLQD--YQKIYKEIEKDKS 195

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQ---AMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           + ++  + L+ +  E+  P +     +    M++ I   L  + I  D F  E DF    
Sbjct: 196 VEEEIENNLMRY--ERADPNIYGKLREIAGVMLQGITGTLAKVWIGFDEFNWESDF---- 249

Query: 270 PSPIRDIIDNLARQGYVYEGI--LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                       R G V + I  + P +    +  ++  +++              L +S
Sbjct: 250 -----------IRSGEVEKAIESVNPSEEGGAKYIEVGGRKVF-------------LTRS 285

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DG+  YF+ D+AY   K +  FD +I V+G DH  + K LE V   +   +++++ +   
Sbjct: 286 DGTTLYFSRDIAYHLYKAQ-NFDWIINVLGEDHKEHGKLLEHVMKGIMNIESKMSFVYYS 344

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN--------------SE 433
            + L       KMS R G+ +TL  +++    +++R +   R +              S 
Sbjct: 345 FITLESG----KMSTRRGNIVTLEDLIERTFEEALRIVREKRPDLEEERMKEIAKVIASS 400

Query: 434 LLDFDFCKVKEQS------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            + F+  +V                + N   ++ Y YAR  SI ++ +    D       
Sbjct: 401 SIRFNIIRVSAPKPITFRWDEALNFEGNSAPFIMYTYARGASIIKKKERDEKDFS----- 455

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  +E D  E +L+  +  YP V+ +A     P  +A YL DLA  F+  +   R 
Sbjct: 456 -------TEMDHEEEELVRQMYLYPYVLSDAAQNLRPDIIAGYLIDLAQKFNDFYKACR- 507

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V      +   R++L+     I+    +I+G++   E+
Sbjct: 508 ------VIGAPDGVYDRRIRLIETYMKIVEDAGDILGIKMLEEI 545


>gi|260598357|ref|YP_003210928.1| arginyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217534|emb|CBA31733.1| Arginyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 577

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 238/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P   AE  +A + +        IAG GFIN++L P++L K +
Sbjct: 37  GDYQANGVMAIAKKLGMPPRQFAEQALAHLDLTGIAAKTEIAGPGFINIFLDPAFLAKNV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + V S    G   +     + +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  EAAVASD-RAGVEKVSAPQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLEFLGHKVI 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSS 219
           R  ++ D G Q   L    +   QQ     +   SDL EG+Y            A K+  
Sbjct: 156 RANHVGDWGTQFGMLI--AYLEKQQKENAGEMALSDL-EGFY----------REAKKHYD 202

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDII 277
           E   F E     +VK   +Q      RD  + L    DI ++++   + R + +  RD +
Sbjct: 203 EDEAFAERARSYVVK---LQGGDDYCRDMWRKLV---DITMTQNQITYQRLNVTLTRDDV 256

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334
              +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y 
Sbjct: 257 MGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYT 315

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLC 386
             D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L 
Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLG 375

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
                 +DG P K   RAG  I L  ++DE                           VG 
Sbjct: 376 ------KDGKPFKT--RAGGTIKLSELLDEALDRARRLVAEKNPDMPADELEKLANAVGI 427

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     +L    
Sbjct: 428 GAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAGVSESEL---- 482

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V+ Q    D  E QL   L ++   +        P+ +  YLYDLA +F G + H 
Sbjct: 483 -TAPVVIQ----DDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A    L   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAETDALRQSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|215487089|ref|YP_002329520.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254782961|sp|B7USQ3|SYR_ECO27 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|215265161|emb|CAS09549.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 577

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGASVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L   
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A + ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAESEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|156933540|ref|YP_001437456.1| arginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166232785|sp|A7MEC0|SYR_ENTS8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|156531794|gb|ABU76620.1| hypothetical protein ESA_01360 [Cronobacter sakazakii ATCC BAA-894]
          Length = 577

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 239/583 (40%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P   AE  +A + +        IAG GFIN++L P++L K +
Sbjct: 37  GDYQANGVMAIAKKLGMPPRQFAEQALAHLDLTGIAAKTEIAGPGFINIFLDPAFLAKNI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + V S    G   +     + +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  EAAVASD-RAGVEKVSAPQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLEFLGHKVI 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E  
Sbjct: 156 RANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALSDLEGFYRE------AKKHYDEDE 205

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNL 280
            F E     +VK   +Q   +  R+  + L    DI ++++   + R + +  RD +   
Sbjct: 206 AFAERARSYVVK---LQGGDEYCREMWRKLV---DITMTQNQITYQRLNVTLTRDDVMGE 259

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAAD 337
           +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y   D
Sbjct: 260 SLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTD 318

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELV 389
           +A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L    
Sbjct: 319 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLG--- 375

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
              +DG P K   RAG  I L  ++DE                           VG  +V
Sbjct: 376 ---KDGKPFKT--RAGGTIKLSELLDEALDRARRLVAGKNPDMPADELEKLANAVGIGAV 430

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     +L       
Sbjct: 431 KYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAGVKESEL-----TA 484

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            V+ Q    D  E QL   L ++   +        P+ +  YLYDLA +F G + H    
Sbjct: 485 PVVIQ----DDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A    L   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILTAETDALRQSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|238762982|ref|ZP_04623949.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698740|gb|EEP91490.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 576

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/582 (23%), Positives = 245/582 (42%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++ ++ +D     + IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAIAKKLGMQPRQLAEKVIEQLNLDGIASKIEIAGPGFINIFLDRQWVASKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +   + G   +   T V I++ + N    MHVGH R  ++GD  A  + F G+ V 
Sbjct: 97  DE-ALKAPKLGVQPVEPQTIV-IDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHRVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+      G+    +  + A K   E 
Sbjct: 155 RANHVGDWGTQFGMLIA-----YLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270
             F +     +VK     +Y  Q   K++   +    I +D   + +++DD   G+    
Sbjct: 204 EEFAQRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM-GESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +  I+ +L  +G   E      +  T    D  + +        G+ +   + K DG 
Sbjct: 263 AMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +K+S       +RAG  I           L+ VVD VG  +V+
Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVDAVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +      N   Y+QYAY R  S+F++A      L   L    
Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDESSLTLPL---- 485

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           VI ++ E       L   L ++  VI        P+ +  YLYDLA +F   + H     
Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + A + +    RL+L    A  +  GL+ +G+++   M
Sbjct: 536 -CQILNAESEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|62180486|ref|YP_216903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168241540|ref|ZP_02666472.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449121|ref|YP_002045963.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|75482759|sp|Q57N89|SYR_SALCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238693639|sp|B4T808|SYR_SALHS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|62128119|gb|AAX65822.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194407425|gb|ACF67644.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205339146|gb|EDZ25910.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|322714962|gb|EFZ06533.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 577

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 240/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|25012094|ref|NP_736489.1| arginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|38372523|sp|Q8E2R1|SYR_STRA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24413638|emb|CAD47715.1| arginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 563

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 26  LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     E        D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +  + E       SK  Q  ++++             ++ P L 
Sbjct: 257 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                        A +S +K  + +LL   V    +    ++  +  +      V   VG
Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A   F   + 
Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  N        D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++
Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563


>gi|50915173|ref|YP_061145.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|68052902|sp|Q5X9F1|SYR_STRP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50904247|gb|AAT87962.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 563

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDETAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563


>gi|168462557|ref|ZP_02696488.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195634216|gb|EDX52568.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 577

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 239/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|224583587|ref|YP_002637385.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224468114|gb|ACN45944.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 563

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 240/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 23  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 82

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 83  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 138

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 139 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 188

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 189 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 242

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 243 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 301

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 302 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 360

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 361 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 413

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 414 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 467

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 468 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 523 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 563


>gi|210623510|ref|ZP_03293855.1| hypothetical protein CLOHIR_01805 [Clostridium hiranonis DSM 13275]
 gi|210153568|gb|EEA84574.1| hypothetical protein CLOHIR_01805 [Clostridium hiranonis DSM 13275]
          Length = 565

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 252/564 (44%), Gaps = 90/564 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IAE I  +I+    +  V   G G++N ++  S L   +++ ++     YG++ +GK
Sbjct: 53  PNMIAEDIAGKIEPKGSISKVVQLG-GYVNFFVDKSKLAETVINKVLTEKENYGKSELGK 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V ++F S N   P H+GH R  V+G+ L  +    GY + R  ++ D G Q   L +
Sbjct: 112 GKTVVVDFSSPNIAKPFHIGHIRTTVIGNALYKIYNSQGYNMVRINHLGDYGTQFGKLIV 171

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVK--D 235
           +   W  ++ + +N   +PE     +Y++ H   E+  +   E        W   ++  D
Sbjct: 172 AFKLWGDKETVESNP--IPE--LLKLYVRFHDEAEVHPEMEDEA-----RAWFTKLENGD 222

Query: 236 YSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291
              +A+ +  RD+ LK  +  +D+   E D + G+      +  +ID +  +G + E   
Sbjct: 223 EEAKALWQWFRDESLKEFSRVYDLLDIEFDSYAGESFYSDKMDRVIDLIKEKGLLEE--- 279

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYE 346
               S+ T   ++D   L             P L  K DGS  Y   DLA   Y K  Y+
Sbjct: 280 ----SEGTNIVNLDAYNL------------TPALITKKDGSTLYMTRDLAAAIYRKETYD 323

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQINV 383
             FD  +YV+GS  + + ++L  V                       +  +S +K ++ V
Sbjct: 324 --FDKCLYVVGSQQALHFQQLFKVLELMGYEWSKDLVHVPFGMVALESGTMSTRKGRV-V 380

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            L +++R   +     +  +  +   +  +  +VG  +V F  L   NS + D+ F   K
Sbjct: 381 FLEDVLRQAIEKTKDIILTKNPNAENVDEIAKQVGVGAVVFQEL--SNSRIKDYTFSWDK 438

Query: 444 EQSKENPVF-YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
             S +     YVQY +ARC ++ R+A +++  D+D+ L         S+  +SE+  ++ 
Sbjct: 439 TLSFDGETGPYVQYTHARCCAVLRKANEEVTSDIDYSLL--------SDEGSSEVLKVIE 490

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
              + + I  +    EP+ +  ++ DLA  F+  +    +NP L     ++ +L   RL 
Sbjct: 491 --SFNKCILASMKKNEPHIVTRFVLDLAQAFNKFY---HDNPIL----VDDAELRKARLA 541

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV A    I +GL ++G+ +P++M
Sbjct: 542 LVEATRQSIENGLALLGMHAPHKM 565


>gi|322388726|ref|ZP_08062323.1| arginine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140345|gb|EFX35853.1| arginine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 563

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 256/595 (43%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSDMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L +++     Y    IG    V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKAAISGQVLQNVITEKEHYADQEIGNQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYKTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F N IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FANSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   V E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAISRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +   +          S  D    ++I  + ++PR+I+ A    EP  +A +   LA  F+
Sbjct: 469 EAGANY---------SLNDAESWEIIKLIQDFPRIIKRAADNYEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|226329867|ref|ZP_03805385.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198]
 gi|225200662|gb|EEG83016.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198]
          Length = 535

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 240/576 (41%), Gaps = 89/576 (15%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L + +G+ P  +AE I+ ++ I    D V IAG GFIN++LSP ++ K     +V   E+
Sbjct: 6   LQKKMGIPPRQLAEKILEKLDITDIADKVEIAGPGFINIFLSPQWVAKQAEDALVD--EH 63

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                 +   + I++ S N    MHVGH R  ++GD  A  ++F G+ V R  ++ D G 
Sbjct: 64  LNVTPVEPQTIVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVVRANHLGDWGT 123

Query: 173 QINTLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           Q   L    +   +Q     D   SDL E Y             A K+  E   F E   
Sbjct: 124 QFGMLI--AYLEKKQNENAADMALSDLEEFYRE-----------AKKHYDEDEVFAERAR 170

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +VK  S     + +   L  + +Q +    +  + R + +   D I   +    +  G
Sbjct: 171 NYVVKLQSGDEYCRTMWRKLVDITMQQN----QATYQRLNVTLTEDDIMGESLYNPMLPG 226

Query: 290 ILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           I+   K+K     + +   ++F        G+ +   + K DG Y Y   D+A  K ++E
Sbjct: 227 IVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRHE 285

Query: 347 R-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               D ++Y + S    +       V++   +  ++S +     ++L       +DG P 
Sbjct: 286 TLHADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSMSLEHHMFGMMLG------KDGRPF 339

Query: 399 KMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKN 431
           K   R+G  I L  ++DE                           VG  +V++  L +  
Sbjct: 340 KT--RSGGTIRLTDLLDEAQERARALIAEKNPDMDKDELNNVARVVGIGAVKYADLSKNR 397

Query: 432 SE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           +   + D+D     E    N   Y+QYAY R  SIF++A     D+D +   + ++  +S
Sbjct: 398 TTDYIFDWDLMLSFEG---NTAPYMQYAYTRVASIFKRA-----DIDENALTQPIVLTQS 449

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                E QL + L ++   I   +    P+ +  YLYDLA  F G + +    P L    
Sbjct: 450 H----ERQLALRLVQFDETIMQVSREGTPHVMCAYLYDLAQAFSGFYENC---PILSAED 502

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N R+    RL+L    A  +  GL+ +G+E+ + M
Sbjct: 503 ENTRQ---SRLKLARLTAKTLKQGLDTLGIETVDRM 535


>gi|259908205|ref|YP_002648561.1| arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963827|emb|CAX55329.1| Arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478133|emb|CAY74049.1| argS [Erwinia pyrifoliae DSM 12163]
          Length = 576

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 144/613 (23%), Positives = 242/613 (39%), Gaps = 111/613 (18%)

Query: 32  IVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           I +  P DC            G    N  M +++ LG+ P  +AE ++ ++ +      V
Sbjct: 16  IAVGAPADCEPQVRQSAKAQFGDYQANGIMAVAKNLGMPPRQLAEKVLEQLDLSGIAHKV 75

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GFIN++L+P +L   + S V++  + G + +   T V I++ + N    MHVGH 
Sbjct: 76  DIAGPGFINIFLAPQWLSAQIDS-VLTAPKLGISPVEPKTVV-IDYSAPNVAKEMHVGHV 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---------------TLALS---VFW 183
           R  ++GD  A  +AF G++V R  ++ D G Q                 TLAL+    F+
Sbjct: 134 RSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEHQETLALADLEAFY 193

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  +  Y+ D    E     V     G E   K   +L++    +   I    +V     
Sbjct: 194 REAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNV----T 249

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + RDD+   ++ +D+              +  I+ +L  +G   E       S+      
Sbjct: 250 LARDDVMGESLYNDM--------------LPGIVADLKAKGLAVE-------SEGATVVF 288

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +D  +        G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    
Sbjct: 289 LDEYK-----NKDGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQ 343

Query: 363 YVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
           ++ +   +   A  V E     + +   +  L +DG P K   RAG  I L  ++DE   
Sbjct: 344 HLMQAWTIVRKAGYVPENIPLEHHMFGMM--LGKDGKPFK--TRAGGTIKLSDLLDEAID 399

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    FD+  +    + N   
Sbjct: 400 RATRLVAEKNPDMPAGELKALANIVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAP 458

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAY R  S+FR+A          +    V       +  E  L V L ++   I   
Sbjct: 459 YMQYAYTRVLSVFRKA---------GIDAEAVSGTTRIIEDREAALAVRLLQFDETITQV 509

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ +  YLYDLA +F G + H         + A +      RL+L    A  +  
Sbjct: 510 ARDGMPHVMCAYLYDLAGLFSGFYEH------CPILNAEDEATKQSRLRLALLTAKTLKQ 563

Query: 573 GLNIIGVESPNEM 585
           GL+ +G+ +   M
Sbjct: 564 GLDTLGIATVERM 576


>gi|315612289|ref|ZP_07887203.1| arginine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315682|gb|EFU63720.1| arginine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 563

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 251/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATDIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L  ++     Y    IGK   + I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQDVITEKEHYADQTIGKQENIVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+      L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D  A +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDIFAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKKEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   + E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D              S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 D---------TASNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAIGLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|76787802|ref|YP_330632.1| arginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|109895042|sp|Q3JYM1|SYR_STRA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76562859|gb|ABA45443.1| arginyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 563

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 254/588 (43%), Gaps = 85/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 26  LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     E        D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +  + E       SK  Q  ++++             ++ P L 
Sbjct: 257 AFYNDKMEEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            KSDG+  Y   DLA   Y +  Y+  F   IYV+G++ S + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRRRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                        A +S +K  + +LL   V    +    ++  +  +      V   VG
Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A   F   + 
Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  N        D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++
Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563


>gi|251783482|ref|YP_002997787.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392114|dbj|BAH82573.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 563

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 256/594 (43%), Gaps = 97/594 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  D       +A   +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIAGELAEQI--DGSQFEKVVAVGPYINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++ A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD--------LKALNIQHDIFI 260
               D+ + E        W   ++D   +A  + +  RD+           LN+  D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYNQLNVTFDSYN 254

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      + ++++ L  +  + E       SK  Q  ++++             +
Sbjct: 255 GEAFYN----DKMDEVLELLEAKNLLVE-------SKGAQVVNLEKY-----------GI 292

Query: 321 DRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370
           + P L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV     
Sbjct: 293 EHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMG 350

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                              A +S +K  + +LL   V    +    ++  +  +      
Sbjct: 351 YDWSDDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEA 409

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           V   VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A   
Sbjct: 410 VAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD-- 465

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                   F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  
Sbjct: 466 --------FTPSTTTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQS 517

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ +++H       R +  N+ + +  RL L +A A+++   L ++GVE+PNEM
Sbjct: 518 FNKYYAH------TRILDDNSERDS--RLALCYATATVLKEALRLLGVEAPNEM 563


>gi|311279226|ref|YP_003941457.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748421|gb|ADO48173.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 577

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 245/591 (41%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +++ + ++     V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIASKVEIAGPGFINIFLDPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +S V + +   R  + K     V I++ + N    MHVGH R  ++GD       F G++
Sbjct: 93  ASHVDAALASDRLGVAKQPAQTVVIDYSAPNVAKEMHVGHVRSTIIGDASVRTQEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216
           V R  ++ D G Q   L   + W  +Q   N      SDL EG+Y            A K
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMALSDL-EGFYRD----------AKK 198

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274
           +  E   F E     +VK   +Q   +  R+  + L    DI ++++   + R + +  R
Sbjct: 199 HYDEDEAFAERARGYVVK---LQGGDEYCREMWRKLV---DITMTQNQITYERLNVTLTR 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y
Sbjct: 253 DDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEAMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383
            Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     +
Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGM 371

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +L       +DG P K   RAG  I L  ++DE                           
Sbjct: 372 MLG------KDGKPFK--TRAGGTIKLSELLDEALDRARRLVAEKNPDMPADELEKLANA 423

Query: 417 VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           VG  +V++  L +  +   + D+D     E    N   Y+QYAY R  S+FR+A      
Sbjct: 424 VGIGAVKYADLSKSRTTDYIFDWDLMLAFEG---NTAPYMQYAYTRVLSVFRKAG----I 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            +  L    VI  E      E QL   L ++   +        P+ +  YLYDLA +F G
Sbjct: 477 EESALASAAVIISEDR----EAQLAARLLQFEETLTVVARDGTPHVMCAYLYDLAGLFSG 532

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + H         + A++  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 533 FYEH------CPILSADSEAVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|205352385|ref|YP_002226186.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690484|sp|B5R8C8|SYR_SALG2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|205272166|emb|CAR37024.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627437|gb|EGE33780.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 577

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 143/586 (24%), Positives = 240/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           S  V   +   R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 93  SEQVQQALTSDRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|149412502|ref|XP_001509403.1| PREDICTED: similar to arginyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 691

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 145/589 (24%), Positives = 260/589 (44%), Gaps = 84/589 (14%)

Query: 43  GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM +++ L       + P  IAE I   +  +  +D V IAG GFIN++LS S
Sbjct: 141 GDYQCNSAMSITQMLQKTKEQKVSPREIAEKITKNLPDNDYIDKVEIAGPGFINVHLSKS 200

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           ++ K L++++V+G++     +G+  KV ++F S N    MHVGH R  ++GD++  L  F
Sbjct: 201 FVSKQLTNLLVNGVQ--PPALGEIKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEF 258

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELA 214
            GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E  
Sbjct: 259 VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEF 317

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            K + + +   + K   I K + +  +  + R +   +    DI I E    RG+     
Sbjct: 318 KKRAYQCVVLLQSKTPEITKAWKM--ICDVSRQEFNKIYDALDISIIE----RGESFYQD 371

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + D++     +G+V              + D D ++++F   + G  V   ++KSDG Y
Sbjct: 372 RMNDVVKEFEDRGFV--------------EVD-DGRKIVF---VPGCPVPLTIVKSDGGY 413

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-----SEKK---AQIN 382
           TY  +DLA  K + +E   + +IYV+ S  S +++ + A A  +      E +   A   
Sbjct: 414 TYDTSDLAAIKQRLFEEKANIIIYVVDSGQSVHLQTVFAAAKMIGWYDPQETRVVHAGFG 473

Query: 383 VLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDS 421
           V+L E              L+ L  +G+   M K   +  D +     LR     V    
Sbjct: 474 VVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTPEELRTAQTSVAFGC 533

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D ++  
Sbjct: 534 IKYADLSHNRMNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLR 587

Query: 482 RNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG- 539
           +     E   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +    
Sbjct: 588 KAAQETEILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCY 647

Query: 540 ---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++    + V+ N     M R+ L  A A+I+  G +I+G++    M
Sbjct: 648 CVEKDRQTGKIVKVN-----MWRMLLCEATAAIMAKGFDILGIKPVQRM 691


>gi|319745997|gb|EFV98279.1| arginine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 574

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 37  LLETPKNSSMGDLAF-PAFSLAKILRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 93

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 94  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 153

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 154 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 213

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     E        D     + +  RD+ L   N  +D      D + G+
Sbjct: 214 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 267

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +  + E       SK  Q  ++++             ++ P L 
Sbjct: 268 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 309

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV           
Sbjct: 310 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 367

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                        A +S +K  + +LL   V    +    ++  +  +      V   VG
Sbjct: 368 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 426

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A   F   + 
Sbjct: 427 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 482

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  N        D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++
Sbjct: 483 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 534

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 535 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 574


>gi|15675893|ref|NP_270067.1| arginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|94989449|ref|YP_597550.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|139474582|ref|YP_001129298.1| arginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|161936118|ref|YP_283171.2| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|23822204|sp|Q99XL5|SYR_STRP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123258095|sp|Q1JJG7|SYR_STRPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232847|sp|A2RGX5|SYR_STRPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13623129|gb|AAK34788.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|94542957|gb|ABF33006.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|134272829|emb|CAM31107.1| arginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|323128228|gb|ADX25525.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 563

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563


>gi|168820735|ref|ZP_02832735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|197248879|ref|YP_002146112.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238912513|ref|ZP_04656350.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|238690037|sp|B5F3I0|SYR_SALA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197212582|gb|ACH49979.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205342662|gb|EDZ29426.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320085472|emb|CBY95253.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322616909|gb|EFY13817.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618147|gb|EFY15039.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625818|gb|EFY22637.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626270|gb|EFY23080.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632684|gb|EFY29429.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639028|gb|EFY35721.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640468|gb|EFY37121.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646023|gb|EFY42540.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649555|gb|EFY45987.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655463|gb|EFY51771.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660242|gb|EFY56480.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662923|gb|EFY59130.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668108|gb|EFY64267.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674132|gb|EFY70226.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675514|gb|EFY71588.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683072|gb|EFY79088.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686766|gb|EFY82744.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195343|gb|EFZ80523.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199235|gb|EFZ84330.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204040|gb|EFZ89055.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207491|gb|EFZ92439.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210677|gb|EFZ95555.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217475|gb|EGA02194.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221966|gb|EGA06356.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224424|gb|EGA08712.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231497|gb|EGA15610.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235939|gb|EGA20018.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240509|gb|EGA24552.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245401|gb|EGA29401.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250172|gb|EGA34064.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253620|gb|EGA37448.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323260282|gb|EGA43903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266873|gb|EGA50359.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269079|gb|EGA52535.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 577

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 239/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|194443417|ref|YP_002041175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|238693529|sp|B4SVG0|SYR_SALNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194402080|gb|ACF62302.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 577

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 242/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|77408152|ref|ZP_00784898.1| arginyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173252|gb|EAO76375.1| arginyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 563

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 26  LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVG-SYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAEI 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     E        D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +  + E       SK  Q  ++++             ++ P L 
Sbjct: 257 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ S + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                        A +S +K  + +LL   V    +    ++  +  +      V   VG
Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +++F  L    +   DFD    V  + +  P  YVQYA+AR +SI R+A   F   + 
Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  N        D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++
Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563


>gi|200390366|ref|ZP_03216977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856570|ref|YP_002243221.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238690436|sp|B5R142|SYR_SALEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|199602811|gb|EDZ01357.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|206708373|emb|CAR32677.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 577

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALTS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|161613533|ref|YP_001587498.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|197263437|ref|ZP_03163511.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|189083546|sp|A9MUA9|SYR_SALPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|161362897|gb|ABX66665.1| hypothetical protein SPAB_01253 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197241692|gb|EDY24312.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|24375609|ref|NP_719652.1| arginyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38372524|sp|Q8E9Y7|SYR_SHEON RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24350506|gb|AAN57096.1|AE015843_8 arginyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 581

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 150/610 (24%), Positives = 258/610 (42%), Gaps = 112/610 (18%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNVAMMLTKAAGKNPRELAQLIIDNLPASAYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEY-GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            ++  S L   L + +  G E+ G  L    T V +++ S N    MHVGH R  ++GD+
Sbjct: 89  FFIDDSALANQLQAAI--GDEHLGIKLPAPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDS 145

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +   + F G++V R+ ++ D G Q   L       Y + L   + +  +           
Sbjct: 146 VVRTLEFLGHKVIRQNHVGDWGTQFGML-----LAYMEELRAANGEQAQ----------- 189

Query: 210 GKELADK---YSSELLNFPEEKWLPIVKDYSVQAMM-------KIIRD--DLKALNIQHD 257
             EL+D    Y +  L F E           V A+        K+ R+  D+ +L+  H+
Sbjct: 190 -LELSDLETFYRAAKLRFDESAEFATRARQLVVALQSGDEYCNKLWREFNDI-SLSHCHE 247

Query: 258 IF------ISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           ++      ++  D H      + +  ++++LA +G + E                +  ++
Sbjct: 248 VYERLGVSLTRADVHGESAYNADLEQVVNDLAAKGLLTES---------------NGAKV 292

Query: 310 LFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG---SDHSG 362
           +F+    T  G+ +   + K+DG Y Y   DLA  + +      D ++Y +    + H  
Sbjct: 293 VFQEEFRTKEGEPLPVIIQKADGGYLYATTDLAAMRYRSNVLKADRVLYFVDLRQALHFQ 352

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
            V  L  +A  V E  +  ++    +     DG P K   R G  + L  ++DE      
Sbjct: 353 QVFSLAKLAKFVREDMSLEHLGFGTMNG--EDGRPFKT--RTGGVVKLVDLLDEANTRAL 408

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F F ++    + N   Y+ 
Sbjct: 409 ELVRSKNPDMDEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLL 467

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   IF++A D+  DL      + V+  E E D         LA++  ++      
Sbjct: 468 YAYTRVAGIFKRATDV--DLS---QAKIVLEHEKEKDLGN-----KLAQFGEILSRVVDK 517

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ L  YLY+LA  F   +      P L    A+N +    RL L    AS +  GLN
Sbjct: 518 GQPHVLCGYLYELAGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTASTLQKGLN 571

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 572 LLGIETLERM 581


>gi|313836272|gb|EFS73986.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928737|gb|EFS92568.1| arginyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971227|gb|EFT15325.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328906514|gb|EGG26289.1| arginine--tRNA ligase [Propionibacterium sp. P08]
          Length = 556

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 246/571 (43%), Gaps = 73/571 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ ++   ++  IAG GFINL L    L ++ 
Sbjct: 31  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDVEDLCETPDIAGPGFINLRLRSDVLARVA 90

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S + ++    G   + +  +V I++ + N    MHVGH R  ++GD    +++  G+ V 
Sbjct: 91  SDL-ITDPNIGITQVEEPQRVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGHTVI 149

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV--YLKHVGK------ELA 214
            + ++ D G Q   L         + +  N  DL E   PGV    K   K      E A
Sbjct: 150 PQNHLGDWGTQFGMLV--------EYIVENRMDLSEFDLPGVEQLYKDAKKTFDADPEFA 201

Query: 215 DKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           D+    +  L   +E+ L I +      ++ +  +   A+  +  + +++DD   G+ + 
Sbjct: 202 DRARRRVVKLQGGDEETLRIWR-----TLIDVSLEGFNAVYARLSVLLTDDDVA-GESTY 255

Query: 273 IRD---IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             D   ++D L   G   E                D   L     + G D    + K DG
Sbjct: 256 NDDLPRVVDELEADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDG 297

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLC 386
            + Y A DLA  + +  +   D +IYV     S + + L  VA  A       +   +  
Sbjct: 298 GFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVETQHVGY 357

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKV 442
            +V L  DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+   
Sbjct: 358 GMV-LGPDGRPFKT--REGGTVSLWSLLDEAETHAAPNIALAAIKYADLSTGLQKDYVFD 414

Query: 443 KE---QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTS 494
            E   Q+  +   Y+QYA+AR   I R+A      D+ P+ D D      I    E   +
Sbjct: 415 AERMVQTTGDTGPYLQYAHARVSQILRKAAAEANPDVDPEADLDAMVWGRISVLDE--PA 472

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E QL + L+++  V+E       P+KL  YLY+LA  +   +    + P LR    +  +
Sbjct: 473 EQQLALLLSQFGEVVELVAQDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGE 525

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL L  A   ++  GL+++G+++P+ M
Sbjct: 526 VRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|191168079|ref|ZP_03029878.1| arginyl-tRNA synthetase [Escherichia coli B7A]
 gi|300924967|ref|ZP_07140893.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301327666|ref|ZP_07220873.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307314212|ref|ZP_07593822.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|309796014|ref|ZP_07690427.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190901877|gb|EDV61627.1| arginyl-tRNA synthetase [Escherichia coli B7A]
 gi|300418879|gb|EFK02190.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300845761|gb|EFK73521.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306906181|gb|EFN36699.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|308120464|gb|EFO57726.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|315061182|gb|ADT75509.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|323378241|gb|ADX50509.1| arginyl-tRNA synthetase [Escherichia coli KO11]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 247/585 (42%), Gaps = 86/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L   +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  +    K  I  ++ + N    MHVGH R  ++GD     + F G++
Sbjct: 97  QQALAS----DRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216
           V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKK 198

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274
           +  E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  R
Sbjct: 199 HYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTR 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y
Sbjct: 253 DDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387
            Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   
Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGM 371

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
           +  L +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 372 M--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L 
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLA 482

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H  
Sbjct: 483 AAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH-- 536

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|170077224|ref|YP_001733862.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692817|sp|B1XPX8|SYR_SYNP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169884893|gb|ACA98606.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 585

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 156/595 (26%), Positives = 247/595 (41%), Gaps = 101/595 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N A+ L++ L  +P  IA+ I+  + I    ++  IAG GFIN  L PSYL  +L
Sbjct: 40  GDYQSNVALSLTKILKKNPREIAQSIIEALDIADTCENPTIAGPGFINFSLKPSYLATLL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             +  S    IE   N      KV ++F S N    MHVGH R  ++GD++A ++ F G 
Sbjct: 100 KEVQQSDRLAIEPAEN----PQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQ 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  ++ D G Q   L   +   Y  AL   D+ L  G     Y K      A     
Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADA-LDIGDLVAFYKK------AKVRFD 208

Query: 220 ELLNFPEEKWLPIVK----DYSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGDP- 270
           E   F E     +VK    D   Q   +++    R + + +    DI ++E    RG+  
Sbjct: 209 EDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTE----RGESF 264

Query: 271 -SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL-- 325
            +P + D++  L   G + E                   Q +F       D DR PL+  
Sbjct: 265 YNPYLADVLTALDEVGLLEEDA---------------GAQCVFLEGFKNKDGDRLPLIVQ 309

Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG + Y   DLA  + +  E     +IYV  S  +G+  ++  VA         + V+
Sbjct: 310 KSDGGFNYATTDLAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQVAERAGFLPDDVEVV 369

Query: 385 LCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
                 +   DG   K+  RAGD I L+ ++DE                           
Sbjct: 370 HVPFGLVQGEDGK--KLKTRAGDTIKLKDLLDEAVNRSRADLEKRLAEDERQETADFIEK 427

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    F F K+    + N   Y+ YAY R + + RQ     
Sbjct: 428 VSQVVGIGAVKYADLSQNRTSNYIFSFDKML-ALQGNTAPYMLYAYVRVQGVSRQGG--- 483

Query: 473 PDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
             +D    P +  +I +E+    +EL L  HL +   V+ +      P +L  YLYDL+ 
Sbjct: 484 --IDLSTLPTDTPIILEEA----AELTLAKHLLQLSEVLMSVEQDLMPNRLCEYLYDLSR 537

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  +      P L+     +R+++  RL L    A  +  GL+++G+E  + M
Sbjct: 538 KFNQFYEAC---PILK--AEGDRRIS--RLILADTTARTLKLGLSLLGIEVLDRM 585


>gi|227892884|ref|ZP_04010689.1| arginine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865290|gb|EEJ72711.1| arginine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 561

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 255/599 (42%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ +  +P  IA+ I A +  D D  S+   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTMHKNPAMIAQDIAANLSSD-DFASIKAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   L    L +++     YG   +GKG  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  INHEKLVSSTLKTVLTEKEHYGDQKLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQAM----------MKIIRDDLKALNIQH 256
               ++  E    PE      +W   ++D   +A+          +K  +   K L +  
Sbjct: 193 ----RFHKEAEKNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKDKGLLHE-------SQGAQVVDMGP---------- 287

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V     
Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 347 YDWADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLANQDQ 405

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+FR+A 
Sbjct: 406 VAHDVGVGAVVFHDL--KNDRLDNFDFNLDEVVRFEGDTGP--YVQYTNARAQSVFRKAA 461

Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +              P E +    D     +   LA++PR+I  +    EP  +A +  
Sbjct: 462 AM-----------GEKPSEKDLVLDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVEATSIVLTESLRLLGVNAPKEM 561


>gi|193069866|ref|ZP_03050815.1| arginyl-tRNA synthetase [Escherichia coli E110019]
 gi|192956766|gb|EDV87220.1| arginyl-tRNA synthetase [Escherichia coli E110019]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 247/587 (42%), Gaps = 90/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L   +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  +    K  I  ++ + N    MHVGH R  ++GD     + F G++
Sbjct: 97  QQALAS----DRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216
           V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKK 198

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274
           +  E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  R
Sbjct: 199 HYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTR 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y
Sbjct: 253 DDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387
            Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   
Sbjct: 312 LYTTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGM 371

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
           +  L +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 372 M--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           +V++  L +  +   + D+D     E    N   Y+QYAY R  S+FR+A +I  +    
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNMLALEG---NTAPYMQYAYTRVLSVFRKA-EINEE---Q 480

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L    VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H
Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|74207302|dbj|BAE30837.1| unnamed protein product [Mus musculus]
          Length = 608

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 59  GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 118

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++    ++G   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 119 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 176

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +    E   
Sbjct: 177 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 235

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R++ K +    DI + E    RG+      
Sbjct: 236 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 289

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++DI+     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 290 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 331

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375
           Y  +DLA  K + +E   + +IYV+ +  + + + + A A  +                 
Sbjct: 332 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 391

Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VRL     +G+   M K   +  D +     L+     V    +
Sbjct: 392 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 451

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  R
Sbjct: 452 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 505

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 506 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 565

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 566 VEKDR-QTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 608


>gi|167552453|ref|ZP_02346206.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168259814|ref|ZP_02681787.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|198246204|ref|YP_002215175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|238690367|sp|B5FSM1|SYR_SALDC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197940720|gb|ACH78053.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205322924|gb|EDZ10763.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205351086|gb|EDZ37717.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|326622923|gb|EGE29268.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|168238541|ref|ZP_02663599.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194737429|ref|YP_002114945.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238689771|sp|B4TYT3|SYR_SALSV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194712931|gb|ACF92152.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288679|gb|EDY28054.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|66043664|ref|YP_233505.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503765|sp|Q4ZZF5|SYR_PSEU2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|63254371|gb|AAY35467.1| Arginyl-tRNA synthetase, class Ic [Pseudomonas syringae pv.
           syringae B728a]
          Length = 579

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/602 (23%), Positives = 251/602 (41%), Gaps = 100/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  +  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADQQISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L + +    +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALAARLDAALADPEKLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 150 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 197 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 256

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 257 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 301

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 302 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 360

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFI----------TL 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 361 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVREKNPEVAEAEL 420

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 421 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 479

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 480 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 527

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 528 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 577

Query: 584 EM 585
            M
Sbjct: 578 RM 579


>gi|330957049|gb|EGH57309.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 578

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 251/600 (41%), Gaps = 97/600 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADDQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L + +V   +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALAARLDAALVD-TQLSVRKAGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL + Y           
Sbjct: 149 NVLEFLGDAVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDLEDFY----------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
             A +   E   F E     +VK  +  A    +    K +++ H   I E    R  P+
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWKRFKDISLSHCQEIYERLNVRLTPA 255

Query: 272 PI----------RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            +           +++++L   G + E       S   Q   ++     FR+    DD  
Sbjct: 256 DVMGESAYNEDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDTP 301

Query: 322 RPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVSE 376
            P++  K+ G Y Y   DLA  + + +    D ++Y +    + + +++  VA  A    
Sbjct: 302 LPVIVQKAGGGYLYATTDLAAIRYRSKVLEADRVLYFVDQRQALHFQQVFEVARRAGFVH 361

Query: 377 KKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LRH 412
           +  Q+  +    +          RDG  +K+        +RA   +           LR 
Sbjct: 362 QGMQLEHMGFGTMNGADGRPFKTRDGGTVKLVDLLDEAEERAYTLVKEKNPEVAEAELRS 421

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+     
Sbjct: 422 IARAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL---- 476

Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               FD    +++   PQE E       L   LA++   + N      P+ L  YLYDLA
Sbjct: 477 -GTPFDADKGHIVLEAPQEQE-------LAARLAQFAETLNNVAEKGTPHVLCAYLYDLA 528

Query: 530 SVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F   + +    G E+P       + +K    RL+L       +  GL+++G+E+   M
Sbjct: 529 GLFSSFYENCPILGAESP-------DQQK---SRLRLAALTGRTLKQGLDLLGLETLERM 578


>gi|224825070|ref|ZP_03698176.1| arginyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224602741|gb|EEG08918.1| arginyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 572

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 139/603 (23%), Positives = 256/603 (42%), Gaps = 126/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKI 101
           G    N  M  ++ L  +P  +A+ ++A + ++     + IAG GFIN++L+P++L R+ 
Sbjct: 36  GDYQANGVMAAAKQLKTNPRELAQKVLAVLDLEGIASKLEIAGPGFINIHLNPAFLARRA 95

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
            +++    +   +       KV +E+ S N    MH+GH R  ++GD L  + +F G+ V
Sbjct: 96  ETALADEALGITKV---DAKKVMVEYSSVNLAKEMHIGHLRGGIIGDALVRVNSFIGHNV 152

Query: 162 TREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
            R+ ++ D G Q   L                   L  F+++ +  ++ D+   +     
Sbjct: 153 VRQNHVGDWGTQFGMLVAYMVEISKSGQADLELKDLDTFYKHSKKRFDEDTAFADTARDY 212

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V     G        +E+L      W         Q  +K+      A+  +  + +++D
Sbjct: 213 VVKLQSG-------DAEVLKL----W---------QQFVKLSLTHCNAIYQKLGLQLNDD 252

Query: 264 DFHRG-----DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           D  RG     D  P+  +++ L ++G + E        +  Q   +D     F++   G+
Sbjct: 253 DV-RGESFYNDDLPV--LVEELRQKGLLVE-------DQGAQVVFLDE----FKNKE-GE 297

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
                + K  G Y Y   DL   + +  + G D  +YV+ S  S + ++L + A  A   
Sbjct: 298 PAAFIVQKQGGGYLYATTDLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWL 357

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL- 434
            ++A    +    + +  DG P+K   R+G+ + L  ++DE    +  F ++  KN EL 
Sbjct: 358 PEEADFQHIGHGTI-MGPDGKPLKT--RSGENVKLVELLDEAVERA--FQLVTSKNPELP 412

Query: 435 ----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQ 467
                     +     K  + SK                  N   Y+QYAY R +S+FR+
Sbjct: 413 EAERRQIAAVVGIGALKYADLSKSRNTDYIFDWDAMLSFEGNTAPYLQYAYTRVQSVFRK 472

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A+      DFD   + +I +      +E QL V LA++  V+     + +P+ L  YLY+
Sbjct: 473 AE------DFDPAAKVLITE-----VAEKQLAVVLAQFEDVVFAVADSSQPHHLCGYLYN 521

Query: 528 LASVFHGHWSHGRENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +A++F             RF +A     +  ++   RLQL    A  + SGL ++G+E  
Sbjct: 522 VATLFS------------RFYEACPILKSEGQVRASRLQLAALTAKTLQSGLGLLGIEVL 569

Query: 583 NEM 585
           + M
Sbjct: 570 DAM 572


>gi|204930959|ref|ZP_03221785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320003|gb|EDZ05208.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 239/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGVMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T   + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTLQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPNMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|330971745|gb|EGH71811.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 579

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 139/601 (23%), Positives = 250/601 (41%), Gaps = 98/601 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  +  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + + L   L + +    +      G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTAALAARLDAALADPEKLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 150 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 197 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 256

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 257 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 301

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
             P++  K+ G Y Y   DLA  + + +    D ++Y +    + + +++  VA  A   
Sbjct: 302 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALHFQQVFEVARRAGFV 361

Query: 376 EKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LR 411
               Q+  +    +          RDG  +K+        +RA   +           LR
Sbjct: 362 HDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAELR 421

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+    
Sbjct: 422 SIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGSA 480

Query: 472 FPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                FD     ++   PQE E       L   LA++   + N      P+ L  YLYDL
Sbjct: 481 -----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYDL 528

Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A +F   + +    G ENP  +            RL+L       +  GL+++G+E+   
Sbjct: 529 AGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLER 578

Query: 585 M 585
           M
Sbjct: 579 M 579


>gi|158631214|ref|NP_001099247.2| arginyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|300669674|sp|P40329|SYRC_RAT RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|171846737|gb|AAI61929.1| Arginyl-tRNA synthetase [Rattus norvegicus]
          Length = 660

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 147/623 (23%), Positives = 271/623 (43%), Gaps = 80/623 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG----- 58
           + +SRL+       C IK     L+   +V+   +    G    N+AM +S+ L      
Sbjct: 75  NINSRLQELF---GCAIKAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 131

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  IAE I   +  +  +D V IAG GFIN++L   ++ + L++++V+G++    ++G
Sbjct: 132 VSPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLP--VLG 189

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  KV ++F S N    MHVGH R  ++G++++ L  F+GY V R  ++ D G Q   L 
Sbjct: 190 ENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLI 249

Query: 179 LSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             +  ++   L  +    DL + +Y     +   +E   K + E +   + K   I+K +
Sbjct: 250 AHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMKAW 308

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293
           ++  +  + R++   +    DI + E    RG+      ++DI+     +G+V       
Sbjct: 309 NL--ICDVSREEFNKIYDALDITLIE----RGESFYQDRMKDIVKEFEDKGFV------- 355

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352
                  + D D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +
Sbjct: 356 -------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKI 404

Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-------------------EKKAQINVLLCELVRLY- 392
           IYV+ +  + + + + A A  +                    E K +      E VRL  
Sbjct: 405 IYVVDNGQATHFQTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMD 464

Query: 393 ------RDGMPIKMSKRAGDFIT---LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                 R  M     K     +T   L+     V    +++  L         F F K+ 
Sbjct: 465 LLEEGLRRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKML 524

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502
           +  + N   Y+ YA+ R RSI R A     ++D ++  R     +   D   E +L   +
Sbjct: 525 D-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQRAARETKIILDHEKEWKLGRCI 578

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L
Sbjct: 579 LRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQT-GKVLKVNMWRMLL 637

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AVA+++  G +I+G++    M
Sbjct: 638 CEAVAAVMAKGFDILGIKPVQRM 660


>gi|74141610|dbj|BAE38569.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++    ++G   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +    E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHMQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R++ K +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++DI+     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375
           Y  +DLA  K + +E   + +IYV+ +  + + + + A A  +                 
Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443

Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VRL     +G+   M K   +  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  R
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDNLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|310767881|gb|ADP12831.1| arginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 576

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 240/616 (38%), Gaps = 117/616 (18%)

Query: 32  IVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           I +  P DC            G    N  M +++ LG+ P  +AE ++ ++ +      V
Sbjct: 16  IAVGAPADCEPQVRQSAKAQFGDYQANGIMAVAKNLGMPPRQLAEKVLEQLDLSGIAHKV 75

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GFIN++L+P +L   + S V+   + G + +   T V I++ + N    MHVGH 
Sbjct: 76  EIAGPGFINIFLAPQWLSAQIDS-VLRAPKLGISPVEPKTVV-IDYSAPNVAKEMHVGHV 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---------------TLALS---VFW 183
           R  ++GD  A  +AF G++V R  ++ D G Q                 TLAL+    F+
Sbjct: 134 RSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEHQETLALADLEAFY 193

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  +  Y+ D    E     V     G E   K   +L++    +   I    +V     
Sbjct: 194 REAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNV----T 249

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + RDD+   ++ +D+              +  I+ +L  +G   E               
Sbjct: 250 LARDDVMGESLYNDM--------------LPGIVADLKAKGLAVES-------------- 281

Query: 304 MDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
            D   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S 
Sbjct: 282 -DGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSR 340

Query: 360 HSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              ++ +   +   A  V E     + +   +  L +DG P K   RAG  I L  ++DE
Sbjct: 341 QHQHLMQAWTIVRKAGYVPENIPLEHHMFGMM--LGKDGKPFK--TRAGGTIKLSDLLDE 396

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  +V++  L +  +    FD+  +    + N
Sbjct: 397 AIDRATRLVAEKNPDMPAGELKALANIVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGN 455

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+FR+A          +    V       +  E  L V L ++   I
Sbjct: 456 TAPYMQYAYTRVLSVFRKA---------GIDAEAVSGTTRIIEDREAALAVRLLQFDETI 506

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ +  YLYDLA +F G + H         + A +      RL+L    A  
Sbjct: 507 TQVARDGMPHVMCAYLYDLAGLFSGFYEH------CPILNAEDEATKQSRLRLALLTAKT 560

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+ +G+ +   M
Sbjct: 561 LKQGLDTLGIATVERM 576


>gi|149911776|ref|ZP_01900381.1| arginyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805164|gb|EDM65185.1| arginyl-tRNA synthetase [Moritella sp. PE36]
          Length = 584

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/607 (22%), Positives = 240/607 (39%), Gaps = 103/607 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R RD AHG L+TN AM++++P   +P  +A+LI+  +     VD   IAG GFIN
Sbjct: 29  RIAVDRTRDKAHGDLATNLAMMMAKPAKKNPRELAQLIIDNLPESDLVDRTEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L+ ++L + +  I +               V ++  S N    MHVGH R +++GD++
Sbjct: 89  IFLNQNWLAQQI-DIALEDDNLAVQKTTAPDTVVVDLSSPNLAKEMHVGHLRSSIIGDSV 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYN 191
           A  +   G+ V R+ ++ D G Q   L                    L VF+R  +  ++
Sbjct: 148 ARTLELLGHNVIRQNHVGDWGTQFGMLLAYMEEKRAENAEISMQLSDLEVFYRAAKGRFD 207

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              D        V +   G E  +K   E  +        I K  +V    K+ RDD++ 
Sbjct: 208 ESEDFAIRAREMVVMLQSGDEECNKLWKEFNDVSLAHCHDIYKRLNV----KLTRDDVRG 263

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
                      + F+  D   + +++  L  QG + E            KC       +F
Sbjct: 264 -----------ESFYNSD---LHNVVSELEAQGLLTES--------NGAKC-------VF 294

Query: 312 RSTMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKR 366
                  D D PL     K+ G + Y   DLA  + + +    + ++Y +    + + ++
Sbjct: 295 LDEFKNKDGD-PLPVIIQKNGGGFLYATTDLAAMRYRQQTLNANRIMYFVDQRQALHFQQ 353

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAG------DFIT---------- 409
           + +V       K + ++       +   DG P K   R+G      D +T          
Sbjct: 354 VFSVVQKAGFVKPETSLEHLGFGTMNGADGRPFKT--RSGGTVKLVDLLTEAEERAYALV 411

Query: 410 -----------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                      L+H+   VG  SV++  L +  S    F+F  +    + N   Y+ YA 
Sbjct: 412 KSKNPNLAEDELKHIARVVGISSVKYADLSKNRSSDYIFNFDSML-SFEGNTAPYLLYAC 470

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R  SIF +       +D     +    +    +  E +L   L ++  ++        P
Sbjct: 471 TRVGSIFNK-------VDAATEAKLATAKVQLNEDKEQELAGKLIQFNEIVHLVAKRATP 523

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  YL++LA VF   +           +   +  + + RL+L    A  +  GL+++G
Sbjct: 524 NTLCTYLFELAGVFSSFYE------ACPILSTEDEAIKLSRLKLAQLTAKTLKQGLDLLG 577

Query: 579 VESPNEM 585
           +E+   M
Sbjct: 578 IETLERM 584


>gi|157158431|ref|YP_001463181.1| arginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980181|sp|A7ZN02|SYR_ECO24 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157080461|gb|ABV20169.1| arginyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 577

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 247/585 (42%), Gaps = 86/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L   +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  +    K  I  ++ + N    MHVGH R  ++GD     + F G++
Sbjct: 97  QQALAS----DRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216
           V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKK 198

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274
           +  E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  R
Sbjct: 199 HYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTR 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y
Sbjct: 253 DDVMGESLYNPMLLGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387
            Y   D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   
Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGM 371

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
           +  L +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 372 M--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A +I  +    L 
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLA 482

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H  
Sbjct: 483 AAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH-- 536

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 ----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|74212414|dbj|BAE30955.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++    ++G   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +    E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R++ K +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++DI+     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375
           Y  +DLA  K + +E   + +IYV+ +  + + + + A A  +                 
Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443

Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VRL     +G+   M K   +  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  R
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|309799197|ref|ZP_07693447.1| arginyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117214|gb|EFO54640.1| arginyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 563

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLEQPKNSDMGDIAF-PAFTLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKNAISAQVLQAVITEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + ++G   K+S R G+ I L   V E                       
Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAISRAKAQIEAKNSELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAANYSLNDPESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|262118273|ref|NP_080212.2| arginyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|20178137|sp|Q9D0I9|SYRC_MOUSE RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|18043638|gb|AAH20132.1| Arginyl-tRNA synthetase [Mus musculus]
 gi|26345154|dbj|BAC36226.1| unnamed protein product [Mus musculus]
 gi|56205734|emb|CAI24388.1| arginyl-tRNA synthetase [Mus musculus]
 gi|74208028|dbj|BAE29127.1| unnamed protein product [Mus musculus]
 gi|148684328|gb|EDL16275.1| arginyl-tRNA synthetase [Mus musculus]
          Length = 660

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++    ++G   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +    E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R++ K +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++DI+     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375
           Y  +DLA  K + +E   + +IYV+ +  + + + + A A  +                 
Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443

Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VRL     +G+   M K   +  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  R
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|113477422|ref|YP_723483.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964531|sp|Q10XL4|SYR_TRIEI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110168470|gb|ABG53010.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 585

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 236/585 (40%), Gaps = 93/585 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L   P  IA  I+  + I+       IAG GFINL L P Y+   L
Sbjct: 40  GDYQCNVAMSLAKKLKDKPKAIATQIINNLNINDYFYPPEIAGPGFINLSLKPEYIENCL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +I+      I   +N      +V I+F S N    MHVGH R  ++GD+LA ++ F G+
Sbjct: 100 ETIIKDEKLNISPTKN----PQRVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGH 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELAD 215
            V R  ++ D G Q   L   +   + +AL   D     DL   Y          ++  +
Sbjct: 156 NVLRLNHVGDWGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQE 215

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K   E++N      L    + S  A   +     +   + +D+   + +  RG+    S 
Sbjct: 216 KSRQEVVN------LQTGAEDSRHAWELLCNQSRREFQVIYDLLDIKLN-ERGESFYNSM 268

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDG 329
           +  I++ L R G + E                D  Q +F S      G+DV   + KSDG
Sbjct: 269 LPGIVEELNRLGLLEES---------------DGAQCVFLSGFTNKEGEDVPLIVKKSDG 313

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLL 385
            Y Y   DLA    + E+ G   +IYV     ++H   V ++   A  + E    +NV  
Sbjct: 314 GYNYATTDLAALVHRIEKEGATRLIYVTDAGQANHFSQVWQVAKKAGWIPENVEIVNVFF 373

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
              + L  DG   K+  R+G+ + L  ++DE                             
Sbjct: 374 G--LVLGEDGK--KLKTRSGETVRLIDLLDEAINKARNDLEKRLKDEKRLESEEFIKNVA 429

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +       F F K+    + N   Y+ YAY R + I R+ +  F  
Sbjct: 430 QVVGLSAVKYADLSQNRKSNYVFSFDKML-ALQGNTAPYLLYAYVRVQGISRKGEINFEK 488

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L  D     +I Q    D  EL L  HL +   V+   TI   P +L  YLY+L+  F+ 
Sbjct: 489 LRKD---AKIILQ----DEPELVLGKHLLKLNEVLNIVTIELLPNRLCEYLYELSEKFNK 541

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            + +    P L+    +   L   RL L    A  +  GL ++G+
Sbjct: 542 FFENC---PVLK----SEEPLRTSRLLLCDLTARTLKLGLYLLGI 579


>gi|118586528|ref|ZP_01543971.1| arginyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118433032|gb|EAV39755.1| arginyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 566

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 259/602 (43%), Gaps = 101/602 (16%)

Query: 29  LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG- 85
           LD++  ++E+P+D   G  +      L+      P  IA      +KI  ++D    A  
Sbjct: 21  LDKLEKLVEKPKDLNRGDYAF-PTFSLAAKFHEAPQKIA------LKIADEIDRTNFANV 73

Query: 86  ---KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                ++N ++    +  ++L  I+++  ++GRN  G G K+ I+  S N   PM +GH 
Sbjct: 74  KAVGPYVNFFIQRVEFTNQLLKEILLND-DFGRNNQGAGKKIVIDMSSPNIAKPMSMGHL 132

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGY 200
           R  V+G+ ++ +   +GY+  +  ++ D G Q    +A    W   + +  N    P   
Sbjct: 133 RSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAAYKLWGDDKLINKN----PVDE 188

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLK 250
              +Y+K   +   DK     L      W   ++D   +A+          +K  ++   
Sbjct: 189 LVKLYVKINKESETDKS----LKDSGRAWFKKLEDGDPEAVKLWNWFKSVSLKEFQEVYD 244

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L +  D    E  F+     P+   +  LA +G + E       S+  +  D+      
Sbjct: 245 RLGVSFDSMNGEA-FYNDKMEPV---VKMLASKGLLTE-------SQGAEIVDLP----- 288

Query: 311 FRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
             + +  D+    ++K SDG+  Y   DLA    +++   F   +YV+G++   +  +++
Sbjct: 289 --NLLPKDNYPIAMIKRSDGATQYITRDLASAIYRHDAYDFAKSLYVVGAEQKDHFDQMK 346

Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           A+                          +S +K  I V L +++   R     ++S++  
Sbjct: 347 AILKLAGDDWADDIEHIGFGMITMNGKKMSTRKGNI-VPLVDVLDTARQLAAEQISEKNP 405

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
                 HV +EVG+ +V F  L +  +  +DFD  K+ + +    P  YVQY +AR  SI
Sbjct: 406 GLENADHVAEEVGAGAVVFNDLQKDRNLSIDFDLEKIVQFEGDTGP--YVQYTHARAMSI 463

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R++             + ++  E  F D     ++  L+ YP +I+ A   +EP  +A 
Sbjct: 464 LRKSGQ-----------QAILNTEVTFVDEEAWPIVSRLSAYPEMIKRAWQLREPSIVAK 512

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL  LA  F+ +++H +       +  NN K+   RL LV  V  ++ SGLN++GV +PN
Sbjct: 513 YLLSLARDFNSYYAHTK-------ILVNNEKM-QSRLSLVQGVCFVLKSGLNLLGVSAPN 564

Query: 584 EM 585
           +M
Sbjct: 565 QM 566


>gi|16760859|ref|NP_456476.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141449|ref|NP_804791.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|21542251|sp|Q8Z5V7|SYR_SALTI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|25293290|pir||AI0744 arginine-tRNA ligase (EC 6.1.1.19) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503156|emb|CAD05660.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137076|gb|AAO68640.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 577

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 241/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALTS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DETFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   R G  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRTGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|198282039|ref|NP_001127107.1| arginyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75041818|sp|Q5RA20|SYRC_PONAB RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|55729309|emb|CAH91390.1| hypothetical protein [Pongo abelii]
          Length = 660

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 255/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINIHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  +I D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DMMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   +LKSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      +    V++  L         F F K+ +  K N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|94995321|ref|YP_603419.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123257496|sp|Q1J486|SYR_STRPF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94548829|gb|ABF38875.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 563

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 143/603 (23%), Positives = 255/603 (42%), Gaps = 115/603 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + ++++ L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLELLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAV--------- 345

Query: 380 QINVLLCELVRLYRDGMP-----------IKMSKRAGDFITLRHVVDE------------ 416
                L E+   + D M             K+S R G+ I L   V E            
Sbjct: 346 -----LQEMGYDWSDDMTHVAFGLVTKGGAKLSTRKGNVILLEPTVAEAINRAASQIEAK 400

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462
                        VG  +++F  L        DFD    V  + +  P  YVQYA+AR +
Sbjct: 401 NPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLETMVSFEGETGP--YVQYAHARIQ 458

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A           F  +     S  D    ++I  + ++PR+I+  +   EP  +A
Sbjct: 459 SILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMA 508

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +  +LA  F+ +++H       R +  N+ +    RL L +A A+++   L ++GV++P
Sbjct: 509 KFAINLAQSFNKYYAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAP 560

Query: 583 NEM 585
           NEM
Sbjct: 561 NEM 563


>gi|70733943|ref|YP_257583.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|109895019|sp|Q4KJK0|SYR_PSEF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68348242|gb|AAY95848.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 578

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 238/594 (40%), Gaps = 85/594 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE I+A +    D+    IAG GFIN 
Sbjct: 30  IQVENTRDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPAHEDLSKAEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          +     G    G   +  I+  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TQALAARLDAALGDDHLGVRKAGPAQRTVIDMSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L    +        +  SDL   Y          +
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGMLM--AYLEENPITSDELSDLENFYRAAKQRFDESE 206

Query: 212 ELADKYSSELLNF----PE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
             AD+    ++      P+  E W    KD S+    KI   +L  + +     + E  +
Sbjct: 207 AFADRARGLVVKLQAGDPDCLELWTKF-KDISLSHCQKIY--ELLNVKLTMADVMGESAY 263

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + +++++L  QG + E       S   Q   +D     F++   G+ +   ++
Sbjct: 264 N----DDLINVVNDLKAQGLLVE-------SNGAQCVFLDE----FKNAE-GEPLPVIIV 307

Query: 326 KSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           K+DG Y Y   DLA    +Y  G    D  +Y +    + + +++ AVA     +KA   
Sbjct: 308 KADGGYLYATTDLA--AVRYRSGKLKADRALYFVDQRQALHFQQVFAVA-----RKAGFV 360

Query: 383 VLLCELVRL--------------YRDGMPIKM-------SKRAGDFIT----------LR 411
               E+  +               RDG  +K+        +RA   +           LR
Sbjct: 361 THPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAEERAYALVKEKNPQLPEADLR 420

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   VG DSV++  L +  +    F+F  +    + N   Y+ YAY R   +FR+    
Sbjct: 421 SIAKVVGIDSVKYADLSKHRTSDYSFNF-DLMLNFEGNTAPYLLYAYTRAAGVFRKLGKD 479

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           F +         V  Q       EL+L   LA++  ++ N      P+ L  YLYD+A +
Sbjct: 480 FSE---------VGGQIELHAAQELELAAKLAQFGEILNNVAEKGTPHILCTYLYDVAGL 530

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + +         + A        RL+L       +  GL ++G++   +M
Sbjct: 531 FSSFYEN------CPILAAETPTQMHSRLRLTELTRRTLKQGLELLGLKVLEQM 578


>gi|74211969|dbj|BAE40154.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 254/601 (42%), Gaps = 109/601 (18%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G+E    ++G   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVELP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L  F++  +  +  D +  E
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFGADEEFKE 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L                   + K   I+K +++  +  + R++ K +    DI
Sbjct: 289 RAYQCVVL------------------LQSKNPDIMKAWNL--ICDVSREEFKKIYDALDI 328

Query: 259 FISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            + E    RG+      ++DI+     +G+V              + D D ++++F   +
Sbjct: 329 TLIE----RGESFYQDRMKDIVKEFEDKGFV--------------QVD-DGRKIVF---V 366

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            G  V   ++KSDG YTY  +DLA  K + +E   + +IYV+ +  + + + + A A  +
Sbjct: 367 PGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQIIFAAAQMI 426

Query: 375 S-------------------EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI- 408
                               E K +      E VRL     +G+   M K   +  D + 
Sbjct: 427 GWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVL 486

Query: 409 ---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
               L+     V    +++  L         F F K+ +  + N   Y+ YA+ R RSI 
Sbjct: 487 TEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIA 545

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R A     ++D  +  R     +   D   E +L   +  +P +++        + L  Y
Sbjct: 546 RLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDY 600

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    
Sbjct: 601 IYELATTFTEFYDSCYCVEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQR 659

Query: 585 M 585
           M
Sbjct: 660 M 660


>gi|196232560|ref|ZP_03131412.1| arginyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196223322|gb|EDY17840.1| arginyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 584

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 148/623 (23%), Positives = 248/623 (39%), Gaps = 134/623 (21%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           ++   D   G   TN AM+L++    +P  +A+ I+ ++ +      + IAG GFIN  L
Sbjct: 25  VQAANDARFGDYQTNIAMVLAKQQKANPRQVAQQIIDQLDVADMCAPLEIAGAGFINFRL 84

Query: 94  SPSYLRKILSSIV------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            P +L K  +  +      V   E+ R L+       I+F S N   PMHVGH R   +G
Sbjct: 85  KPEWLAKHFTGFLSDARLGVPQPEHARTLV-------IDFSSPNVAKPMHVGHIRSTFLG 137

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ---QALYNNDSDLPEGYYPGV 204
           D L+ +  F G++V R+ +I D G Q   + L   W+ +   +AL  +     E  Y  +
Sbjct: 138 DALSRIAEFVGHKVIRDNHIGDWGTQFGMILLG--WKTELNKEALAADALLEMERIYKLI 195

Query: 205 ---------YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                     L+   +EL    S +  N   + W  +++    Q      R     L ++
Sbjct: 196 SARCKADPATLQAAQQELVKLQSGDEENL--QLWHEMIRLSQAQFDAVYAR-----LGVR 248

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D+ + E  ++      ++D++  L  +G   E                +    +F S  
Sbjct: 249 FDVTLGESFYN----PQLKDVVVQLRDRGIARES---------------EGAWCVF-SDQ 288

Query: 316 VGDDVDRPLL---------------KSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359
           VG   + P L               KSDG+  Y   DLA  + + +      ++YV    
Sbjct: 289 VGKPENDPFLIKDKDGWRDNPAMVQKSDGASNYTTTDLATLEYRLKTWSPTEIVYVTDGR 348

Query: 360 HSGYVKRLEAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              + ++L A+        AA V         +L +      DG P K   R+GD + L 
Sbjct: 349 QQLHFRQLFAIFGRWHSELAATVRLAHVWFGAVLGD------DGKPFKT--RSGDTVKLV 400

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV----------------KEQS--------- 446
            ++DE  ++   + ++  KN E  + D  ++                  QS         
Sbjct: 401 DLLDE--AEERAYALVTEKNPEASEADRREIARVVGLGAVKYADLLPNRQSDYVFSWEKM 458

Query: 447 ---KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHL 502
              + N   Y+Q AY R R+IFR+A + F           V     E  + +EL L   L
Sbjct: 459 LSFQGNTAPYLQNAYVRIRAIFRKAGEAF----------EVGNTAVELVEPAELSLAKKL 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++  V+        P  LA YL++LA+++HG +      P L+   A        RL L
Sbjct: 509 LQFGEVLPFVLEDYRPNLLANYLFELATIYHGFYEF---CPVLKSEGATRTS----RLAL 561

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A A ++  GL ++G+E+P  M
Sbjct: 562 CDATARVLKQGLGLLGIEAPERM 584


>gi|194466680|ref|ZP_03072667.1| arginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453716|gb|EDX42613.1| arginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 562

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 157/615 (25%), Positives = 268/615 (43%), Gaps = 115/615 (18%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D K ++E KI      ERP+D ++G  +      L++ L   P  IA  +V ++  D 
Sbjct: 17  EMDVK-EIEAKI------ERPKDPSNGDYAF-PTFFLAKTLHKAPQMIASELVEKVDQD- 67

Query: 77  DVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
             + V +AG  +IN +L  + +  KIL +I+     YG   +G    V I++ S N   P
Sbjct: 68  GFEKVVVAGP-YINFFLDKAQVGAKILQTILADPEHYGEIDLGHEANVTIDYSSPNIAKP 126

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDS 194
           M +GH R  ++G+ +A ++    Y + R  Y+ D G Q   L A    W  +  +  +  
Sbjct: 127 MGMGHLRSTMIGEAVARILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPI 186

Query: 195 DLPEGYYPGVYLKHVG------KELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIR 246
           +    YY  V + +         E    + ++L +  EE W      ++ S++   ++  
Sbjct: 187 NTLLKYY--VRINNEADEHPEYTEAGRNWFAKLEHGDEEAWRLWHWFREVSLERFQRV-- 242

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K L++  D F  E    +    PI+ + D         + +L P  S+  +  D+D 
Sbjct: 243 --YKMLDVNFDSFNGEAFSAQKMEEPIQLLRD---------KDLLKP--SRGAEIVDLDE 289

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS 361
             L             PLL  KS+G+ TY   DLA   + K  Y  G    +YV+G++  
Sbjct: 290 YNL------------PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQE 335

Query: 362 GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415
            Y K+L A    +      QI  +   L+ L  +G   KMS R G+ ++L  V++     
Sbjct: 336 TYFKQLRAALKEMGFNWWDQIEHISFGLMNL--NGK--KMSTRKGNVVSLEDVLNDSIDL 391

Query: 416 --------------------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVF 452
                               EVG  +V F  L  +R+N+  ++F     VK + +  P  
Sbjct: 392 ARKQIAEKNPDLENADEVAKEVGVGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP-- 447

Query: 453 YVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           YVQYA AR  SI R+   +D F D+D            ++      +LI  L +Y   I+
Sbjct: 448 YVQYARARAESILRKGGIRD-FSDVDL-----------TKAGAEAWELISFLGQYSEAIK 495

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  +P  +A Y  +LA  F+ +++H R          +  +    RL L  AV+ ++
Sbjct: 496 RAALNYDPSVIAKYALELAKKFNQYYAHTR--------ILDKDEAQPARLALTQAVSDVL 547

Query: 571 NSGLNIIGVESPNEM 585
            S L+++ +++P+EM
Sbjct: 548 KSALDLLDIKAPDEM 562


>gi|85711525|ref|ZP_01042583.1| arginyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694677|gb|EAQ32617.1| arginyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 580

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 135/603 (22%), Positives = 244/603 (40%), Gaps = 99/603 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I ++RPRD +HG  ++N A++L++P  ++P  +AE ++  I  +  +    IAG GFIN
Sbjct: 29  KIQLDRPRDKSHGDFASNLALMLAKPAKMNPRQLAEKVIEAIPANTLIAKTDIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             ++   L+  L++++ S  + G     K   + I++ S N    MHVGH R A++GD +
Sbjct: 89  FTIAQDQLKSQLTTMLSSA-DLGIQPAEKPMTIVIDYSSPNLAKEMHVGHLRSAIIGDAV 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA-----------------LSVFWRYQQALYNND 193
           +      G++V R+ ++ D G Q   L                  L  F++  +  ++  
Sbjct: 148 SRTAEMLGHKVIRQNHVGDWGTQFGMLLAHMEELDSEAANYELSNLETFYKAAKKRFDES 207

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            D  E     V    V  +  D Y  +L N   +  L   ++   +  +K+ RDD+ A +
Sbjct: 208 EDFAERARELV----VKLQSGDDYCLKLWNQFIDVSLAHCQEVYDRLGVKLTRDDVMAES 263

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
             +D               +  +I++L +QG + E        +  Q   +D     F+ 
Sbjct: 264 AYND--------------RLPGVIEHLKQQGLLVE-------DQGAQCVFLDE----FKG 298

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
              G+ +   + K  G Y Y   DLA  + +  E G D ++Y + +  S + +++  +A 
Sbjct: 299 KE-GEPLPIIVQKKGGGYLYATTDLAAIQYRQKELGGDYLMYFVDARQSLHFEQIFTLAR 357

Query: 373 AVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
                +  I          + +DG P K   R G    L  ++DE               
Sbjct: 358 KAKFIEGDIKTQHYGFGTVMGKDGRPYK--SRDGGVTKLADLLDEAERRALELLQQKNSD 415

Query: 417 ------------VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                       VG  SV++  L +  +   + D+D     E    N   Y+ YA+ R  
Sbjct: 416 LTAEQQEAVAKVVGISSVKYADLSKNRTSDYIFDWDLMLTFEG---NTAPYLLYAFTRVN 472

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF +  +   D+D D             D  EL L   L  +  V+        P+ L 
Sbjct: 473 SIFDKLGERSFDMDADWLLE---------DERELALANQLIRFEEVVNRVFDKAMPHFLC 523

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           +   +  +   RL+L    A+ +  GL ++G+ + 
Sbjct: 524 GYLFELAGYFSSFYEA------CPILNQEDEAVRNSRLKLARLTANTLEKGLALLGIPTL 577

Query: 583 NEM 585
            +M
Sbjct: 578 EKM 580


>gi|116490937|ref|YP_810481.1| arginyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276881|sp|Q04FF6|SYR_OENOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116091662|gb|ABJ56816.1| arginyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 566

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 259/602 (43%), Gaps = 101/602 (16%)

Query: 29  LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG- 85
           LD++  ++E+P+D   G  +      LS      P  IA      +KI  ++D    A  
Sbjct: 21  LDKLEKLVEKPKDLNRGDYAF-PTFSLSAKFHEAPQKIA------LKIADEIDRTNFANV 73

Query: 86  ---KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                ++N ++    +  ++L  I+++  ++GRN  G G K+ I+  S N   PM +GH 
Sbjct: 74  KAVGPYVNFFIQRVEFTNQLLKEILLND-DFGRNNQGAGKKIVIDMSSPNIAKPMSMGHL 132

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGY 200
           R  V+G+ ++ +   +GY+  +  ++ D G Q    +A    W   + +  N    P   
Sbjct: 133 RSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAAYKLWGDDKLINKN----PVDE 188

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLK 250
              +Y+K   +   DK     L      W   ++D   +A+          +K  ++   
Sbjct: 189 LVKLYVKINKESETDKS----LKDSGRAWFKKLEDGDPEAVKLWNWFKSVSLKEFQEVYD 244

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L +  D    E  F+     P+   +  LA +G + E       S+  +  D+      
Sbjct: 245 RLGVSFDSMNGEA-FYNDKMEPV---VKMLASKGLLTE-------SQGAEIVDLP----- 288

Query: 311 FRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
             + +  D+    ++K SDG+  Y   DLA    +++   F   +YV+G++   +  +++
Sbjct: 289 --NLLPKDNYPIAMIKRSDGATQYITRDLASAIYRHDAYDFAKSLYVVGAEQKDHFDQMK 346

Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           A+                          +S +K  I V L +++   R     ++S++  
Sbjct: 347 AILKLAGDDWADDIEHIGFGMITMNGKKMSTRKGNI-VPLVDVLDTARQLAAEQISEKNP 405

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
                 HV +EVG+ +V F  L +  +  +DF+  K+ + +    P  YVQY +AR  SI
Sbjct: 406 GLENADHVAEEVGAGAVVFNDLQKDRNLSIDFNLEKIVQFEGDTGP--YVQYTHARAMSI 463

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R++             + ++     F D     ++  L+ YP +I+ A   +EP  +A 
Sbjct: 464 LRKSGQ-----------QAILNTGVTFVDEEAWPIVSRLSAYPEMIKRAWQLREPSIVAK 512

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL  LA  F+ +++H +       +  NN K+   RL LV  V S++ SGLN++GV +PN
Sbjct: 513 YLLSLARDFNSYYAHTK-------ILVNNEKM-QSRLSLVQGVCSVLKSGLNLLGVSAPN 564

Query: 584 EM 585
           +M
Sbjct: 565 QM 566


>gi|148544494|ref|YP_001271864.1| arginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153859|ref|YP_001842200.1| arginyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363078|ref|ZP_03847214.1| arginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682815|ref|ZP_08162331.1| arginine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166987304|sp|A5VL03|SYR_LACRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229470719|sp|B2G8D8|SYR_LACRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148531528|gb|ABQ83527.1| arginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225203|dbj|BAG25720.1| arginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071899|gb|EEI10186.1| arginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977165|gb|EGC14116.1| arginine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 562

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 156/615 (25%), Positives = 269/615 (43%), Gaps = 115/615 (18%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D K ++E KI      ERP+D ++G  +      L++ L   P  IA  +V ++  + 
Sbjct: 17  EMDVK-EIEAKI------ERPKDSSNGDYAF-PTFFLAKTLHKAPQMIASELVEKVDQN- 67

Query: 77  DVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
             + V +AG  +IN +L  + +  KIL +I+     YG   +G  + V I++ S N   P
Sbjct: 68  GFEKVVVAGP-YINFFLDKAQVGAKILQTILADPEHYGEIDLGHQSNVTIDYSSPNIAKP 126

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDS 194
           M +GH R  ++G+ +A ++    Y + R  Y+ D G Q   L A    W  +  +  +  
Sbjct: 127 MGMGHLRSTMIGEAVARILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPI 186

Query: 195 DLPEGYYPGVYLKHVG------KELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIR 246
           +    YY  V + +         E    + ++L +  EE W      ++ S++   ++  
Sbjct: 187 NTLLKYY--VRINNEADEHPEYTEAGRNWFAKLEHGDEEAWRLWHWFREVSLERFQRV-- 242

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K L++  D F  E    +    PI+ + D         + +L P  S+  +  D+D 
Sbjct: 243 --YKMLDVNFDSFNGEAFSAQKMEEPIQLLRD---------KDLLKP--SRGAEIVDLDE 289

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS 361
             L             PLL  KS+G+ TY   DLA   + K  Y  G    +YV+G++  
Sbjct: 290 YNL------------PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQE 335

Query: 362 GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415
            Y K+L A    +      QI  +   L+ L  +G   KMS R G+ ++L  V++     
Sbjct: 336 TYFKQLRAALKEMGFNWWDQIEHISFGLMNL--NGK--KMSTRKGNVVSLEDVLNDSIDL 391

Query: 416 --------------------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVF 452
                               EVG  +V F  L  +R+N+  ++F     VK + +  P  
Sbjct: 392 ARKQIAEKNPDLENADEVAKEVGVGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP-- 447

Query: 453 YVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           YVQYA AR  SI R+   +D F D+D            ++      +LI  L +Y   I+
Sbjct: 448 YVQYARARAESILRKGGIRD-FSDVDL-----------TKAGAEAWELISFLGQYSEAIK 495

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  +P  +A Y  +LA  F+ +++H R          +  +    RL L  AV+ ++
Sbjct: 496 RAALNYDPSVIAKYALELAKKFNQYYAHTR--------ILDKDEAQPARLALTQAVSDVL 547

Query: 571 NSGLNIIGVESPNEM 585
            S L+++ +++P+EM
Sbjct: 548 KSALDLLDIKAPDEM 562


>gi|289422685|ref|ZP_06424525.1| arginine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156864|gb|EFD05489.1| arginine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 570

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 255/575 (44%), Gaps = 108/575 (18%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IAE +   I++   V      G G++N +++   L +K+++ +      YG++ +G 
Sbjct: 54  PNMIAEDLSTSIELGEGVTKCINLG-GYVNFFVAKDALAKKVITQVFDERENYGKSDLGG 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V I++ S N   P H+GH R  V+G+ L  + +  GY+V R  ++ D G Q   L +
Sbjct: 113 GKTVVIDYSSPNIAKPFHIGHIRTTVIGNALYKIYSSQGYKVERINHLGDYGTQFGKLIV 172

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIV 233
           +   W  + A+                +K + K L  ++  E  + PE       W   +
Sbjct: 173 AYKLWGDKSAV------------EAEPIKELLK-LYVRFHDEAESKPEMEDEARAWFTRL 219

Query: 234 K--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           +  D   + + +  RD+ LK     +D+   E DF            D+ A + + Y   
Sbjct: 220 ENNDPEAKELWQWFRDESLKEFQRVYDLL--EIDF------------DSYAGESF-YSDK 264

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGD--DVDRP---LLKSDGSYTYFAADLA---YFK 342
           +P    +  QK  +   Q     TM+ D  DV+ P   + K+DGS  Y   DLA   Y K
Sbjct: 265 MPAVLEELRQKNLLVESQ----GTMIVDLEDVNLPPALIQKNDGSTLYITRDLAAAFYRK 320

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKA 379
             Y+  FD  IYV+GS    + K+L  V                          +S +K 
Sbjct: 321 NTYD--FDKAIYVVGSQQELHFKQLFNVIRKMGYDWYKDMNHVQFGMVALEEGTMSTRKG 378

Query: 380 QINVLLCELVRLYRDGM-PIKMSKR--AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           ++ V L +++R   D    I M K   AGD   +  +  EVG  +V F  L   NS + D
Sbjct: 379 RV-VFLEDVLRQAIDKTREIIMEKNPGAGD---IDKIAKEVGVGAVVFQEL--SNSRIKD 432

Query: 437 FDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESE 490
           + F   +  S E     YVQY +ARC ++ R+A      D+  +++FDL         S+
Sbjct: 433 YTFSWSRTLSFEGETGPYVQYTHARCCALKRKANLEISADLVANINFDLL--------SD 484

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            D+S++  ++    + + I+ +    EP+ +  ++ DLA  F+  + +   NP    +  
Sbjct: 485 EDSSDVLKVIET--FNKSIQTSMRKNEPHIVTRFVLDLAQAFNKFYHN---NP----IIV 535

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++L + RL LV +    I + L+++G+++P +M
Sbjct: 536 EDKELMIARLALVESTRQTIENALDLLGMKAPEKM 570


>gi|21911345|ref|NP_665613.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896719|ref|NP_803069.1| arginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25453284|sp|Q8K5J2|SYR_STRP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21905560|gb|AAM80416.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811973|dbj|BAC64902.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 563

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 138/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + ++++ L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLELLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563


>gi|116671696|ref|YP_832629.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611805|gb|ABK04529.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 585

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 151/598 (25%), Positives = 257/598 (42%), Gaps = 102/598 (17%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
           +  NAAM L++ +GL P   A  IV  +++D    +V I+G GFINL    +++ ++L++
Sbjct: 33  IQVNAAMALAKKVGLPPRDAAARIVEALELDGLCTAVEISGPGFINLTFDGTWIEELLNA 92

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              S  + G     +  +V +++ S N    MHVGH R  VVGD+L  ++   G+ V R+
Sbjct: 93  -QASQPQGGPET--QARRVVVDYSSPNVAKEMHVGHLRTTVVGDSLVRVLEALGHTVIRQ 149

Query: 165 YYINDAGAQINTL--------------AL-----SVFWRYQQALYNNDSDLPEGYYPGVY 205
            +I D G     L              AL     S F++  +A +++    P+ +     
Sbjct: 150 NHIGDWGTPFGMLIEHWLEIGEDSPEAALLVEDPSAFYQAARAKFDSSDGSPDSFATRAR 209

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L+ V  + A + + E+       W  +V D+S +     I   L  ++++ D    E  +
Sbjct: 210 LRVVSLQSAHEETLEV-------WQRLV-DHS-KVYFNAIYATL-GVSLEDDHIAGESSY 259

Query: 266 HRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR- 322
              DP  +  +   L  +G   V EG L          C        F +   G D +  
Sbjct: 260 ---DPH-LAQLCQELEERGLARVSEGAL----------C-------TFPAGFKGRDGEPL 298

Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA------- 372
           PL+  KSDG Y Y   DLA  + +  E   D ++YV+G+  + +++ +   A        
Sbjct: 299 PLIIRKSDGGYGYATTDLATIRYRVQELHADRILYVVGAPQNVHLRMVFETAREAGWLPD 358

Query: 373 AVSEKKAQINVLLCELVRLY--RDGMPIKMSKRAGDFI-TLRHVVD-------------- 415
            V     QI  +L E  ++   R G P+K+     + +   R VVD              
Sbjct: 359 TVEATHVQIGNVLGEDGKILKSRSGTPVKLMALLEEAVDRARAVVDSSRPDLSDEERAVT 418

Query: 416 --EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             +VG  +V++  L   +     FDF ++   S  N   YVQYA AR RSI R+A+    
Sbjct: 419 ARQVGIGAVKYADLAVGHDTEYVFDFDRMLALSG-NTGPYVQYAAARIRSILRKAEAAAS 477

Query: 474 DLDFDLFPRNVIPQESE------FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                  P     + +        + +E  L +HL EY   +       EP++L  YL++
Sbjct: 478 PAG---EPGEAAGEPTAAVSIAVVEPAERALALHLLEYGATLRKVGELLEPHRLCAYLFE 534

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L+ +F   +    + P L+     +  +   RL L   V   ++ GL+++G+E+P  M
Sbjct: 535 LSQLFTSFYD---QCPVLK----ADESVRQSRLALCALVLHRLSEGLDLLGIETPENM 585


>gi|254429152|ref|ZP_05042859.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195321|gb|EDX90280.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 584

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 257/596 (43%), Gaps = 86/596 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + I+R +D +HG  +TN A++L++P G+ P  +AE ++A +  D  V  V IAG GFIN 
Sbjct: 30  VQIDRTKDKSHGDFATNIALMLAKPAGMKPRDLAEKLIAALPSDSAVAKVDIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +  +L  +L S +      G +   +   V +++ S N    MHVGH R  ++GD + 
Sbjct: 90  FQADDWLTGLLDSALADDF-LGIDRPEQPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             + F G+ V R+   N  G       + + +  +Q     + +L              K
Sbjct: 149 RTLEFLGHTVIRQ---NHVGDWGTQFGMLLAYLEEQKAEEGERELSRELANLETFYRAAK 205

Query: 212 ELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISED 263
           +  D+  +    F +     +VK     DY +    +  +  L      +D   + ++  
Sbjct: 206 QRFDESDT----FADRARALVVKLQSGDDYCLSLWAEFNQVSLSHCQAIYDRLGVSLTPS 261

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D  RG+ +    +  ++ +L  +G + E       S+  Q   MD     F++   G+ +
Sbjct: 262 DV-RGESAYNDDLAQVVADLDSKGLLSE-------SQGAQCVFMDA----FKNKE-GEPL 308

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKR---LEAVAAAV 374
              + K+DG Y Y  +DLA  +  Y  G    D M+Y +    + + ++   L  +AA V
Sbjct: 309 PVIVRKADGGYLYATSDLAALR--YRAGTLQADRMLYFVDQRQALHFQQMFTLAKLAAFV 366

Query: 375 SEKKAQINVLLCEL----VRLY--RDGMPIKM-------SKRAGDFIT----------LR 411
            E+    ++    +     R +  RDG  +K+        +RA   +           LR
Sbjct: 367 PEQTELAHMGFGTMNGPDGRPFKTRDGGTVKLVDLLDEAEQRAFALVQEKNPQLDEDELR 426

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   VG  +V++  L +  S    F+F ++    + N   Y+ YAY R  S+FR+A+  
Sbjct: 427 TIARSVGIGAVKYADLSKNRSSDYIFNFEQML-SFEGNTAPYLLYAYTRVASVFRKAE-- 483

Query: 472 FPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                     R++     +F   + +E  L   L ++  V++N     +P+ L+ YLYD+
Sbjct: 484 ----------RDMASVSGDFLLNEDAEQALAARLVQFAEVLQNVADKGQPHLLSTYLYDV 533

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A +F   + H         + + +  +   RL+L    A  +  G+ ++G+ SP E
Sbjct: 534 AGLFSSFYEH------CPILSSEDEGIRNSRLKLAALTARTLKHGMELLGL-SPLE 582


>gi|189054553|dbj|BAG37326.1| unnamed protein product [Homo sapiens]
          Length = 660

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 254/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKNRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V  G               D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFVQVG---------------DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|157427804|ref|NP_001098808.1| arginyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|300681170|sp|A7YW98|SYRC_BOVIN RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|157278917|gb|AAI34469.1| RARS protein [Bos taurus]
 gi|296485074|gb|DAA27189.1| arginyl-tRNA synthetase [Bos taurus]
          Length = 660

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 146/609 (23%), Positives = 264/609 (43%), Gaps = 77/609 (12%)

Query: 20  CKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARI 72
           C IK    +L+   +++   +    G    N+AM + + L      ++P  IAE IV  +
Sbjct: 86  CAIKAAYPVLENPPLIVTPSQQPKFGDYQCNSAMGICQMLKTKEQKVNPREIAENIVKHL 145

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
             +  ++ V IAG GFIN++L   ++ + L++++V+G++     IG+  KV ++F S N 
Sbjct: 146 PDNEYIEKVEIAGPGFINIHLRKGFVSQQLTNLLVNGVKIPS--IGENKKVIVDFSSPNI 203

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
              MHVGH R  ++G+++  L  F+GY V R  ++ D G Q   L   +  ++   L  +
Sbjct: 204 AKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVS 263

Query: 193 D--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
               DL + +Y     +   +E   K + + +   + K   I+K + +  +  + R +  
Sbjct: 264 PPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFN 320

Query: 251 ALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +    DI + E    RG+      + DI+     +G+V              + D D +
Sbjct: 321 KIYEALDISLIE----RGESFYQDRMHDIVKEFEDRGFV--------------QVD-DGR 361

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKR 366
           +++F   + G  V   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + 
Sbjct: 362 KIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSLHFQT 418

Query: 367 LEAVA--------AAVSEKKAQINVLLCE--------------LVRLYRDGMPIKMSK-- 402
           +   A        A      A   V+L E              L+ L  +G+   M K  
Sbjct: 419 VFGAAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLK 478

Query: 403 ---RAGDFIT--LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
              R     T  L+     V    +++  L         F F K+ +  + N   Y+ YA
Sbjct: 479 EKERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYA 537

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQ 516
           + R RSI R A     ++D ++  +     E   D   E +L   +  +P V++      
Sbjct: 538 FTRIRSIARLA-----NIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPEVLQKILDDL 592

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             + L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I
Sbjct: 593 LLHTLCDYIYELATTFTEFYDSCYCVEKDR-QSGEVLKVNMWRMLLCEAVAAVMAKGFDI 651

Query: 577 IGVESPNEM 585
           +G++    M
Sbjct: 652 LGIKPVQRM 660


>gi|56413172|ref|YP_150247.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362098|ref|YP_002141735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|213163291|ref|ZP_03349001.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426390|ref|ZP_03359140.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|81361941|sp|Q5PMZ2|SYR_SALPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238690743|sp|B5BH46|SYR_SALPK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56127429|gb|AAV76935.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093575|emb|CAR59038.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 577

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 241/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALTS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   R G  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRTGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|308187218|ref|YP_003931349.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057728|gb|ADO09900.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 576

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 235/597 (39%), Gaps = 111/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG  P  +AE ++  + +      V IAG GFIN++L  ++L K  
Sbjct: 37  GDYQANGIMAVAKKLGQAPRQLAEAVIQHLDLTGIASKVEIAGPGFINIFLDHNWLAKHA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +S    G  L    T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  RE-ALSLPRLGVQLAEPQTIV-VDYSAPNVAKEMHVGHIRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D +  E     V
Sbjct: 155 RANHVGDWGTQFGMLIAFLEKQQNENHAEMALADLEGFYREAKRTYDEDPEFAERARGYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G E   +   +L++    +   I    +V     + R+D+   ++ +D+      
Sbjct: 215 VKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNV----TLTRNDVMGESLYNDML----- 265

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                P     I+ +L ++G   E       S+      +D  Q        G+ +   +
Sbjct: 266 -----PG----IVADLKQKGLAVE-------SEGATVVYLDEFQ-----NKEGEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYVPESVPL 364

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----- 431
           +     ++L       +DG P K   R+G  I L  ++DE    +  + ++  KN     
Sbjct: 365 EHHAFGMMLG------KDGRPFKT--RSGGTIKLSDLLDEAWQRA--YTLVREKNPEMSE 414

Query: 432 ------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQA 468
                 +E++     K  + SK                  N   Y+QYAY R  S+FR+A
Sbjct: 415 AEVKALAEVMGISAVKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKA 474

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 LD ++    VI +E E      QL   L ++  VI        P+ +  YLYDL
Sbjct: 475 GIDADSLDAEI----VISEERE-----AQLATRLLQFEEVITQVARDGTPHVMCAYLYDL 525

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F G + H         + A +    + RLQL    A  +  GL+ +G+++   M
Sbjct: 526 AGLFSGFYEH------CPILSAESDATRLSRLQLAALTAKTLKQGLDTLGIDTVERM 576


>gi|16765251|ref|NP_460866.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994213|ref|ZP_02575305.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|325530298|sp|E1WGF0|SYR_SALTS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|325530299|sp|P0CL51|SYR_SALTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|16420446|gb|AAL20825.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327860|gb|EDZ14624.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247079|emb|CBG24900.1| ArgRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993894|gb|ACY88779.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158429|emb|CBW17938.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912903|dbj|BAJ36877.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321224552|gb|EFX49615.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323130193|gb|ADX17623.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988802|gb|AEF07785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 577

 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 242/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK   +Q+     R+  + L    DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|209523094|ref|ZP_03271650.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496245|gb|EDZ96544.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 600

 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 248/592 (41%), Gaps = 95/592 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L  +P  IA  I+  ++ID       IAG GFINL L   YL   L
Sbjct: 55  GDYQCNVAMSLTKRLKSNPRQIASTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQL 114

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++  ++    G    G    V ++F S N    MHVGH R  ++GD +A ++ F G++V 
Sbjct: 115 NA-KLTDPRLGIAPNGNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVL 173

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   +  +Y  AL   D     DL E Y             A K  
Sbjct: 174 RLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQ-----------AKKRF 222

Query: 219 SELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E   F E     +V+  S         + +    R + + +  + DI ++E    RG+ 
Sbjct: 223 DEDEEFKEASREQVVRLQSGAEDSRRAWELLCDQSRREFQQIYDRLDIKLTE----RGES 278

Query: 271 --SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
             +P + +++ +L   G + E            KC      L   +   GD +   + KS
Sbjct: 279 FYNPMLAEVVADLEASGLLVE--------DQGAKCVF----LEGFTNKEGDPLPLIVQKS 326

Query: 328 DGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV------------ 374
           +G Y Y   DLA  + +    G   +IYV  +  + +  ++  VA  V            
Sbjct: 327 NGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQVWQVARRVGWIPDGVDVVHV 386

Query: 375 ----------------SEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFITLRHVVDE 416
                           S +  ++  LL E V+  ++ +  ++ +  RA     + HV + 
Sbjct: 387 PFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHVAEV 446

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+V++  L +  +    F F K+    + N   Y+ YAY R + I R+       +D
Sbjct: 447 VGIDAVKYADLSQNRTSDYIFSFDKMLS-LQGNTAPYMLYAYVRIQGISRKGS-----ID 500

Query: 477 FD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFH 533
           F+ +  R  I  +   D SEL L  HL +   VI+  T+AQE  P +L  YL++L+  F+
Sbjct: 501 FEQVGDRASIHLQ---DPSELTLAKHLLQLHEVID--TVAQELLPNRLCQYLFELSQKFN 555

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +      P L+  + +       RL L H  A  +  GL+++G+   + M
Sbjct: 556 QFYDRC---PVLKADECDRAS----RLALCHLTAETLRLGLSLLGISVLDRM 600


>gi|168234027|ref|ZP_02659085.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468774|ref|ZP_03074758.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455138|gb|EDX43977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331975|gb|EDZ18739.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 577

 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 238/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  I  ++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F       +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAARARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG P K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPNMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|330977161|gb|EGH77119.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 578

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKASGLLVE-------SNGAQCVFLEE----FRTA---DDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYAPTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|119487496|ref|ZP_01621106.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106]
 gi|119455665|gb|EAW36801.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106]
          Length = 585

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 237/578 (41%), Gaps = 79/578 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L  +P  IA  I+ +++I    +   IAG GFINL L P YL   L
Sbjct: 40  GDYQCNVAMSLTKALKSNPRAIATQIIEKLEISDLCEPPEIAGPGFINLRLKPEYLEAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++I+      G   +    KV ++F S N    MHVGH R  ++GD++A ++ F   +V 
Sbjct: 100 NNILTDE-RLGIPTVDNPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFLDDDVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   +   Y +AL   D+    DL   Y           E  +   
Sbjct: 159 RLNHVGDWGTQFGMLITYLREVYPEALTTADALDIGDLVAFYRQAKVRFDEDNEFKEASR 218

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRD 275
            E++       L    + S +A   +     +   + +D+   +    RG+    S + +
Sbjct: 219 QEVVK------LQAGAEDSRRAWTILCEQSRREFQVIYDLLDIQLK-ERGESFYNSFLSE 271

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           ++ +L + G + E            KC  +D  Q        G+ +   + KSDG Y Y 
Sbjct: 272 VVKDLEKTGLLEE--------NQGAKCVFLDGFQ-----NKEGEALPLIVQKSDGGYNYA 318

Query: 335 AADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLY 392
             DLA  + +  +   D MIYV  S  + +  ++  VA        +++V+     + L 
Sbjct: 319 TTDLAALRYRINQDQADRMIYVTDSGQANHFTQVWQVARKAGWIPDEVDVIHVPFGLVLG 378

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSDS 421
            DG   K+  R+G+ + LR ++DE                               VG  +
Sbjct: 379 EDGK--KLKTRSGETVRLRDLLDEAINRARKDLETRLKEEGRTESKEFIENVAQVVGMSA 436

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V++  L +  +    F F K+    + N   Y+ YAY R + I R+      ++DF    
Sbjct: 437 VKYADLSQNRTSNYVFSFDKML-SLQGNTAPYLLYAYVRIQGIRRKG-----EIDFKQVG 490

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                Q  E   +E  L  HL +   VIE   I   P +L  YL++L+  F+  +    +
Sbjct: 491 TEAKMQLQE--EAEFTLAKHLLQLNEVIETVAIELLPNRLCQYLFELSQKFNQFYD---Q 545

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            P L+   A      + RL L    A  +  GL+++G+
Sbjct: 546 CPVLKAEDAQR----ISRLGLCDLTARTLKLGLSLLGI 579


>gi|152993784|ref|YP_001359505.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425645|dbj|BAF73148.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 565

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 153/606 (25%), Positives = 254/606 (41%), Gaps = 139/606 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM LS+ L  +P  IA  I+  +     V    IAG GFINL+L+ +++ +  
Sbjct: 36  GDYQFNGAMALSKKLRKNPREIASEIMEHLDFSGIVAKAEIAGPGFINLWLNDTWVAQAC 95

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
                    GIE   N I    KV +++   N    MHVGH R  ++GDTLA+L+ F G 
Sbjct: 96  EKARADERLGIEKTSNPI----KVVVDYSGPNMAKQMHVGHLRSTIIGDTLANLLEFLGD 151

Query: 160 EVTREYYINDAGAQINTLA----------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           EV R+ +I D G Q   L                 L  F++  +  ++ D    +     
Sbjct: 152 EVIRQNHIGDWGTQFGMLIAYLEERGEDGSGSLKDLEQFYKDAKKRFDEDEAFADKAREY 211

Query: 204 VYLKHVGKE----LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           V     G E    L  K+    L   EE +  +         +++ R+D+KA     + F
Sbjct: 212 VVKIQSGDEHCLNLWQKFIDISLGHCEEVYDKLC--------VRLTREDVKA-----ESF 258

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            +ED         + +++ +LA++G + E       S+  Q C      + F      D+
Sbjct: 259 YNED---------LPEVVADLAKEGRLRE-------SEGAQ-C------VFFEE----DE 291

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           +   + K DG Y Y   DLA  + +    G   + YV+ +    + K++  V        
Sbjct: 292 IPVIVQKGDGGYLYATTDLAALRYRANILGAKRISYVVDARQGEHFKQIFKV-------- 343

Query: 379 AQINVLLCELVRLY---------RDGMPIKMSKRAGDFITLRHVVDE------------- 416
           A+++  + + VRL          + G P K   R G  + L  ++DE             
Sbjct: 344 AKMSGFVPKDVRLEHVAFGTMMDKGGKPFKT--RDGGTVKLIDLLDEAVVKAKAAIKEKD 401

Query: 417 -------------VGSDSVRF--MMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYAR 460
                        +G  +V++  + + R+++ + ++D    K  S E N   Y+QYAYAR
Sbjct: 402 DYSEEEVEKLAKTIGIGAVKYADLSINRESNYIFNWD----KMLSFEGNTSLYMQYAYAR 457

Query: 461 CRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
            +SIFR+   DI  D+        VI      D  E +L V L  +  ++E A     P 
Sbjct: 458 IQSIFRRYGGDIKGDI--------VIT-----DALEHRLGVMLLRFEEILERAAEDAAPN 504

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++  YLY+L ++F   +    +NP L+  +  +      RL L    A  I  GL+I+G+
Sbjct: 505 QITTYLYELVTLFMRFYE---QNPILK--EGVDEATKQSRLALADMTAKTIKQGLDILGI 559

Query: 580 ESPNEM 585
           E  +++
Sbjct: 560 EVVDKL 565


>gi|330951295|gb|EGH51555.1| arginyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 578

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATPDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|56750043|ref|YP_170744.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81596947|sp|Q5N643|SYR_SYNP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56685002|dbj|BAD78224.1| arginyl-tRNA-synthetase [Synechococcus elongatus PCC 6301]
          Length = 584

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 239/591 (40%), Gaps = 106/591 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N AM L++ LG  P  IAE +V  + +    +   IAG GFIN  L PSYL   L
Sbjct: 40  GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +       G   +    +V ++F S N    MHVGH R  ++GD++A ++ F G+EV 
Sbjct: 100 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210
           R  ++ D G Q   L   +  +Y QAL   D    SDL   Y            + +   
Sbjct: 159 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 218

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + D  S E      + W  ++ D S +   KI       L+IQ +         RG+ 
Sbjct: 219 QRVVDLQSGEATA--RQAW-QLLCDQSRREFQKIY----DRLDIQLE--------ERGES 263

Query: 271 --SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-- 325
             +P +  I+++L R G + E              D   + +        +    PL+  
Sbjct: 264 FYNPYLPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQ 309

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380
           KSDG Y Y   DLA    +Y  G D    +IYV  S  + +  ++  VA  A      AQ
Sbjct: 310 KSDGGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQ 367

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           I  +   LV+   DG   K+  RAGD + LR ++DE                        
Sbjct: 368 IEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEF 424

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    F F K+    + N   Y+ YAY R + I R+  
Sbjct: 425 IEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGG 483

Query: 470 DIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
             F  LD         P  +E  + +E  L   + +   V++       P +L  YL++L
Sbjct: 484 IDFAQLD---------PVAAELTEPTERSLAKQVLQLGEVLDEVARDLLPNRLCSYLFEL 534

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +  F+  +       R   + A   + T  RL L    A  +  GL+++G+
Sbjct: 535 SQTFNQFYD------RCPILNAEEPQRT-SRLLLCDLTARTLKLGLSLLGI 578


>gi|311273964|ref|XP_003134121.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Sus scrofa]
          Length = 660

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 254/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L  S+
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKNLPDNEYIEKVEIAGPGFINIHLKKSF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     IG   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSQQLTNLLVNGVQLP--AIGANKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L  F++  +  ++ + +  +
Sbjct: 229 GYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLRVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L      L  K    L      K   ++ D S Q   KI     +AL+I   +
Sbjct: 289 RAYQCVVL------LQSKNPDIL------KAWKLICDVSRQEFSKI----YEALDIS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA------ 371
            V   ++KSDG YTY  +DLA  K + +E   D +IYV+ S  S + + +   A      
Sbjct: 370 PVPLTIVKSDGGYTYDTSDLATIKQRLFEEKADMIIYVVDSGQSLHFQAVFGAAQMMGWY 429

Query: 372 -------------AAVSEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI---- 408
                          + E K +      E VR   L  +G+   M K   +  D +    
Sbjct: 430 DPEVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L+     V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P V++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEVLQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M RL L  AVA+++  G +I+G++    M
Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GEVLKVNMWRLLLCKAVAAVMAKGFDILGIKPVQRM 660


>gi|291571146|dbj|BAI93418.1| arginyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 585

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 250/595 (42%), Gaps = 101/595 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L  +P  IA  I+  ++ID       IAG GFINL L   YL   L
Sbjct: 40  GDYQCNVAMSLTKKLKSNPRQIAGTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           ++ +     GI   R+      KV ++F S N    MHVGH R  ++GD +A ++ F G+
Sbjct: 100 NAKLTDPRLGIAPNRD----PQKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGH 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELAD 215
           +V R  ++ D G Q   L   +  +Y  AL   D     DL E Y             A 
Sbjct: 156 QVLRLNHVGDWGTQFGMLISYLQEKYPSALTTADVLDIGDLVEFYRQ-----------AK 204

Query: 216 KYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
           K   E   F E     +V+  S         + + +  R + + +  + DI ++E    R
Sbjct: 205 KRFDEDEEFKEASREQVVRLQSGAEDSRRAWELLCEQSRREFQQIYDRLDIKLTE----R 260

Query: 268 GDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+   +P + +++ +L   G + E            KC      L   +   GD +   +
Sbjct: 261 GESFYNPMLAEVVADLEASGLLVE--------DQGAKCVF----LEGFTNKEGDPLPLIV 308

Query: 325 LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV--------- 374
            KS+G Y Y   DLA  + +    G   +IYV  +  + +  ++  VA  V         
Sbjct: 309 QKSNGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQVWQVARRVGWIPDGVDV 368

Query: 375 -------------------SEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFITLRHV 413
                              S +  ++  LL E V+  ++ +  ++ +  RA     + HV
Sbjct: 369 VHVPFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHV 428

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            + VG D+V++  L +  +    F F K+    + N   Y+ YAY R + I R+      
Sbjct: 429 AEVVGIDAVKYADLSQNRTSDYIFSFDKML-SLQGNTAPYMLYAYVRIQGISRKGS---- 483

Query: 474 DLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLAS 530
            +DF+ +  R  I  +   D SEL L  HL +   VI+   +AQE  P +L  YL++L+ 
Sbjct: 484 -IDFEQVGDRASIHLQ---DPSELTLAKHLLQLHEVID--AVAQELLPNRLCQYLFELSQ 537

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  +      P L+  + +       RL L H  A  +  GL+++G+   + M
Sbjct: 538 KFNQFYDRC---PVLKADECDRSS----RLALCHLTAETLRLGLSLLGISVLDRM 585


>gi|302189057|ref|ZP_07265730.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 578

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLEAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|290890411|ref|ZP_06553486.1| hypothetical protein AWRIB429_0876 [Oenococcus oeni AWRIB429]
 gi|290479807|gb|EFD88456.1| hypothetical protein AWRIB429_0876 [Oenococcus oeni AWRIB429]
          Length = 566

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 259/602 (43%), Gaps = 101/602 (16%)

Query: 29  LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG- 85
           LD++  ++E+P+D   G  +      L+      P  IA      +KI  ++D    A  
Sbjct: 21  LDKLEKLVEKPKDLNRGDYAF-PTFSLAAKFHEAPQKIA------LKIADEIDRTNFANV 73

Query: 86  ---KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                ++N ++    +  ++L  I+++  ++GRN  G G K+ I+  S N   PM +GH 
Sbjct: 74  KAVGPYVNFFIQRVEFTNQLLKEILLND-DFGRNNQGAGKKIVIDMSSPNIAKPMSMGHL 132

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGY 200
           R  V+G+ ++ +   +GY+  +  ++ D G Q    +A    W   + +  N    P   
Sbjct: 133 RSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAAYKLWGDDKLINKN----PVDE 188

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLK 250
              +Y+K   +   DK     L      W   ++D   +A+          +K  ++   
Sbjct: 189 LVKLYVKINKESETDKS----LKDSGRAWFKKLEDGDPEAVKLWNWFKSVSLKEFQEVYD 244

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L +  D    E  F+     P+   +  LA +G + E       S+  +  D+      
Sbjct: 245 RLGVSFDSMNGEA-FYNDKMEPV---VKMLASKGLLTE-------SQGAEIVDLP----- 288

Query: 311 FRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
             + +  D+    ++K SDG+  Y   DLA    +++   F   +YV+G++   +  +++
Sbjct: 289 --NLLPKDNYPIAMIKRSDGATQYITRDLASAIYRHDAYDFAKSLYVVGAEQKDHFDQMK 346

Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           A+                          +S +K  I V L +++   R     ++S++  
Sbjct: 347 AILKLAGDDWADDIEHIGFGMITMNGKKMSTRKGNI-VPLVDVLDTARQLAAEQISEKNP 405

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
                 HV +EVG+ +V F  L +  +  +DF+  K+ + +    P  YVQY +AR  SI
Sbjct: 406 GLENADHVAEEVGAGAVVFNDLQKDRNLSIDFNLEKIVQFEGDTGP--YVQYTHARAMSI 463

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R++             + ++     F D     ++  L+ YP +I+ A   +EP  +A 
Sbjct: 464 LRKSGQ-----------QAILNTGVTFVDEEAWPIVSRLSAYPEMIKRAWQLREPSIVAK 512

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL  LA  F+ +++H +       +  NN K+   RL LV  V S++ SGLN++GV +PN
Sbjct: 513 YLLSLARDFNSYYAHTK-------ILVNNEKM-QSRLSLVQGVCSVLKSGLNLLGVSAPN 564

Query: 584 EM 585
           +M
Sbjct: 565 QM 566


>gi|322378000|ref|ZP_08052487.1| arginine--tRNA ligase [Streptococcus sp. M334]
 gi|321280982|gb|EFX57995.1| arginine--tRNA ligase [Streptococcus sp. M334]
          Length = 563

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKIVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVITQKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAQAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|94993337|ref|YP_601436.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123257687|sp|Q1J9B9|SYR_STRPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94546845|gb|ABF36892.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 563

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 138/590 (23%), Positives = 254/590 (43%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
               D+ + E        W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++D L  +  + E       SK  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                          A +S +K  + +LL   V    +    ++  +  +      V   
Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +
Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H       R +  N+ +    RL L +A A+++   L ++ V++PNEM
Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLSVDAPNEM 563


>gi|50121444|ref|YP_050611.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81644856|sp|Q6D474|SYR_ERWCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49611970|emb|CAG75419.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 576

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 137/597 (22%), Positives = 241/597 (40%), Gaps = 111/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + ++   +   IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWVASQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  ++  + G   +   T V I++ + N    MHVGH R  ++GD  A  + F G+ + 
Sbjct: 97  EN-ALNAPKLGLTPVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNII 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D+D  E    G 
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQNESANEMDLSDLEAFYREAKKHYDEDADFAE-RARGY 213

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K  G    D+Y  ++       W  +V     Q  +   R  L     + D+ + E  
Sbjct: 214 VVKLQG---GDEYCRQM-------WRKLVDITMTQNQINYER--LNVTLTKQDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++    S + +I+ +L  +G   E       S+      +D  +        G+ +   +
Sbjct: 261 YN----SMLPNIVADLKAKGLAVE-------SEGATVVFLDEYK-----NKEGEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +VS 
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVSL 364

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----- 431
           +     ++L       +DG P K   RAG  I L  ++DE    +++  ++  KN     
Sbjct: 365 EHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYGRALK--LIAEKNPQMES 414

Query: 432 ------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQA 468
                 ++++     K  + SK                  N   Y+QYAY R  SIF++A
Sbjct: 415 DELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFKRA 474

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 +  D   + +       D  E  L   L ++   I +      P+ +  YLYDL
Sbjct: 475 -----GIQEDTLTQPITLN----DEREFALATRLLQFEETITSVAREGTPHVMCSYLYDL 525

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F G + H         + A N  +   RL+L    A  +  GL+ +G+E+ ++M
Sbjct: 526 AGLFSGFYEH------CPILNAENDDVRQSRLRLALLTAKTLKQGLDTLGIETVDKM 576


>gi|225869424|ref|YP_002745372.1| arginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511657|sp|C0MGC8|SYR_STRS7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225702700|emb|CAX00816.1| arginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 563

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 252/604 (41%), Gaps = 117/604 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  RI      + V   G  ++N +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKALRKAPQAIASDLAERIDAS-QFEKVAAVGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L+ ++  G +Y +   G+G  + I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKASISAQVLTQVIADGADYAQQDEGQGRHIAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGNEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     EE       D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSLDEEAREWFRRLEEG------DQEATELWQWFRDESLIEFNRLYDQLGVSFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +G + E       SK  +  ++++             ++ P L 
Sbjct: 257 AFYNDKMDEVLELLEDKGLLVE-------SKGAKVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAV----------- 345

Query: 382 NVLLCELVRLYRDGMP-----------IKMSKRAGDFITLRHVVDE-------------- 416
              L E+   + D M             K+S R G+ I L   V E              
Sbjct: 346 ---LKEMGYDWSDDMTHVAFGLVTKGGAKLSTRKGNVILLEPTVAEAISRAANQIEAKNP 402

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSI 464
                      VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI
Sbjct: 403 KLANKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSI 460

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A           F   V    S  D    ++I  + ++PR+I+ A    EP  +A +
Sbjct: 461 LRKAS----------FTPAVDTSYSLNDPESWEIIKLIQDFPRIIKRAFDNFEPSIMAKF 510

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
              LA  F+ +++H R   ++P     + +NR      L L +A A ++   L ++GVE+
Sbjct: 511 AIHLAQSFNKYYAHTRILEDDP-----ERDNR------LALCYATAIVLKEALRLLGVEA 559

Query: 582 PNEM 585
           PNEM
Sbjct: 560 PNEM 563


>gi|157963591|ref|YP_001503625.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083549|sp|A8H953|SYR_SHEPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157848591|gb|ABV89090.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 581

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 238/606 (39%), Gaps = 104/606 (17%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG  +TN AM+L++  G +P  +A+L++  +     V+ V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDFATNLAMMLTKAAGKNPRELAQLLIDNLPESSHVEKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            ++  + L   L + + S   GIE     +     V +++ S N    MHVGH R  ++G
Sbjct: 89  FFIDDNALANQLMAALNSDTLGIE-----LPASQTVVVDYSSPNLAKEMHVGHLRSTIIG 143

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQ 187
           D++   + F G++V R+ ++ D G Q   L                     L  F+R  +
Sbjct: 144 DSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLETFYRAAK 203

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             ++   +        V     G E  +K   E  +        + +   V      +R 
Sbjct: 204 VRFDESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRG 263

Query: 248 D-------------------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +                   L   N    +F  E     G+P P   +I   A  GY+Y 
Sbjct: 264 ESAYNSDLAQVVADLDSQGLLSESNGAKVVFQDEFKNKEGEPLP---VIIQKADGGYLY- 319

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------GSYTYFAADLAYFK 342
                           D   + +RS ++  + DR L   D          +  A  A F 
Sbjct: 320 -------------ATSDLAAMRYRSNVL--NADRALYFVDLRQALHFQQVFKLAKTAKF- 363

Query: 343 CKYERGFDNMIY--VMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIK 399
            + E  F++M +  + G D   +  R   V   +   K+A I  L  +LVR     M   
Sbjct: 364 VREEMSFEHMGFGTMNGEDGRPFKTRSGGVVKLIDLLKEADIRAL--DLVRSKNPDM--- 418

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                 D   L  +   VG  SV++  L +  +    F F ++    + N   Y+ YAY 
Sbjct: 419 ------DEAELAEIARVVGIASVKYADLSKNRASDYIFSFEQML-SFEGNTAPYLLYAYT 471

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R   IF++A+D+      DL    +I +  +    E  L   LA++  V+       +P+
Sbjct: 472 RVAGIFKRAQDV------DLSDAKIILEHEK----EKDLGTKLAQFGEVMARMVSKGQPH 521

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  YL++LA  F   +      P L    A   +L   RL L    A  +  GLN++G+
Sbjct: 522 ALCGYLFELAGAFSSFY---EACPVL---AAETEELKKSRLLLSQLTAKTLKQGLNLLGL 575

Query: 580 ESPNEM 585
           E+   M
Sbjct: 576 ETLERM 581


>gi|284051070|ref|ZP_06381280.1| arginyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 585

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 249/595 (41%), Gaps = 101/595 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L  +P  IA  I+  ++ID       IAG GFINL L   YL   L
Sbjct: 40  GDYQCNVAMSLTKKLKSNPRQIAGTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           ++ +     GI   R+      KV ++F S N    MHVGH R  ++GD +A ++ F G+
Sbjct: 100 NAKLTDPRLGIAPNRD----PQKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGH 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELAD 215
           +V R  ++ D G Q   L   +  +Y  AL   D     DL E Y             A 
Sbjct: 156 QVLRLNHVGDWGTQFGMLISYLQEKYPSALTTADVLDIGDLVEFYRQ-----------AK 204

Query: 216 KYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
           K   E   F E     +V+  S         + +    R + + +  + DI ++E    R
Sbjct: 205 KRFDEDEEFKEASREQVVRLQSGSEDSRRAWELLCDQSRREFQQIYDRLDIKLTE----R 260

Query: 268 GDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+   +P + +++ +L   G + E            KC      L   +   GD +   +
Sbjct: 261 GESFYNPMLAEVVADLEASGLLVE--------DQGAKCVF----LEGFTNKEGDPLPLIV 308

Query: 325 LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV--------- 374
            KS+G Y Y   DLA  + +    G   +IYV  +  + +  ++  VA  V         
Sbjct: 309 QKSNGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQVWQVARRVGWIPDGVDV 368

Query: 375 -------------------SEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFITLRHV 413
                              S +  ++  LL E V+  ++ +  ++ +  RA     + HV
Sbjct: 369 VHVPFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHV 428

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            + VG D+V++  L +  +    F F K+    + N   Y+ YAY R + I R+      
Sbjct: 429 AEVVGIDAVKYADLSQNRTSDYIFSFDKMLS-LQGNTAPYMLYAYVRIQGISRKGS---- 483

Query: 474 DLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLAS 530
            +DF+ +  R  I  +   D SEL L  HL +   VI+   +AQE  P +L  YL++L+ 
Sbjct: 484 -IDFEQVGDRASIHLQ---DPSELTLAKHLLQLHEVID--AVAQELLPNRLCQYLFELSQ 537

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  +      P L+  + +       RL L H  A  +  GL+++G+   + M
Sbjct: 538 KFNQFYDRC---PVLKADECDRSS----RLALCHLTAETLRLGLSLLGISVLDRM 585


>gi|304396251|ref|ZP_07378133.1| arginyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356620|gb|EFM20985.1| arginyl-tRNA synthetase [Pantoea sp. aB]
          Length = 594

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 235/596 (39%), Gaps = 109/596 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL---- 98
           G    N  M +++ LG  P  +AE ++  + +      V IAG GFIN++L  ++L    
Sbjct: 55  GDYQANGIMAVAKKLGQAPRQLAEAVIQHLDLTGIASKVEIAGPGFINIFLDHNWLATHA 114

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R+ LS +   G++     + +   + +++ + N    MHVGH R  ++GD     + F G
Sbjct: 115 RQALS-LPRLGVQ-----LAEPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLG 168

Query: 159 YEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGY 200
           + V R  ++ D G Q   L                   L  F+R  +  Y+ D +  E  
Sbjct: 169 HNVIRANHVGDWGTQFGMLIAFLEKQQNEDHAEMALADLEGFYREAKRTYDEDPEFAERA 228

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
              V     G E   +   +L++    +   I    +V     + R+D+   ++ +D+  
Sbjct: 229 RSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNV----TLTRNDVMGESLYNDM-- 282

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
                       +  I+ +L ++G   E       S+      +D  Q        G+ +
Sbjct: 283 ------------LPGIVSDLKQKGLAVE-------SEGATVVFLDEFQ-----NKEGEPM 318

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHSGYVKRLEAV--AAAVSE 376
              + K DG Y Y   D+A  K +YE    N +  Y+    H   V+    V  A  V E
Sbjct: 319 GVIIQKKDGGYLYTTTDIACAKYRYETLKANRVLYYIDSRQHQHLVQAWTIVRKAGYVPE 378

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
                +     +  L +DG P K   R+G  I L  ++DE                    
Sbjct: 379 SVPLEHHAFGMM--LGKDGRPFKT--RSGGTIKLSDLLDEAYQRAYSLVREKNPEMSEAE 434

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A 
Sbjct: 435 VKTLAEVVGISAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKAG 493

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                LD ++    VI +E E      QL   L ++  VI        P+ +  YLYDLA
Sbjct: 494 INADSLDAEI----VISEERE-----AQLATRLLQFEEVITQVARDGTPHVMCAYLYDLA 544

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F G + H         + A +    + RLQL    A  +  GL+ +G+++   M
Sbjct: 545 GLFSGFYEH------CPILSAESDATRLSRLQLAALTAKTLKQGLDTLGIDTVERM 594


>gi|237798091|ref|ZP_04586552.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020943|gb|EGI01000.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 578

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 250/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +    +     ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALALRLDAALADANLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    + +  K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESAEFAERARGLVVKLQAGDAECLTLWERFKDISLSHCQQTYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHNGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAETEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLEAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G E+P  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAESPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|81300386|ref|YP_400594.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81169267|gb|ABB57607.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 590

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 234/590 (39%), Gaps = 104/590 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N AM L++ LG  P  IAE +V  + +    +   IAG GFIN  L PSYL   L
Sbjct: 46  GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 105

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +       G   +    +V ++F S N    MHVGH R  ++GD++A ++ F G+EV 
Sbjct: 106 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 164

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210
           R  ++ D G Q   L   +  +Y QAL   D    SDL   Y            + +   
Sbjct: 165 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 224

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + D  S E      + W         Q +    R + + +  + DI + E      +P
Sbjct: 225 QRVVDLQSGEATA--RQAW---------QLLCDQSRREFQKIYDRLDIQLEERGESFYNP 273

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328
             +  I+++L R G + E              D   + +        +    PL+  KSD
Sbjct: 274 Y-LPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQKSD 318

Query: 329 GSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383
           G Y Y   DLA    +Y  G D    +IYV  S  + +  ++  VA  A      AQI  
Sbjct: 319 GGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQIEH 376

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +   LV+   DG   K+  RAGD + LR ++DE                           
Sbjct: 377 VPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEFIEA 433

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    F F K+    + N   Y+ YAY R + I R+    F
Sbjct: 434 VAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGGIDF 492

Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             LD    P   +   P E       LQL   L E  R +        P +L  YL++L+
Sbjct: 493 AQLD----PVAAVLTEPTERSLAKQVLQLGEVLDEVARDL-------LPNRLCSYLFELS 541

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             F+  +       R   + A   + T  RL L    A  +  GL+++G+
Sbjct: 542 QTFNQFYD------RCPILNAEEPQRT-SRLLLCDLTARTLKLGLSLLGI 584


>gi|292488556|ref|YP_003531440.1| arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899728|ref|YP_003539097.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199576|emb|CBJ46693.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553987|emb|CBA21032.1| Arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172701|emb|CBX80957.1| Arginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 576

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 234/596 (39%), Gaps = 109/596 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++ ++ ++     V IAG GFIN++L+P +L   +
Sbjct: 37  GDYQANGIMAVAKKLGMPPRQLAEKVLEQLDLNGIAHKVDIAGPGFINIFLAPQWLSAQI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            S V++  + G + +   T V I++ + N    MHVGH R  ++GD  A  +AF G++V 
Sbjct: 97  DS-VLTAPKLGVSPVEPETVV-IDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D          V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKQQNEHHEAIALADLEAFYREAKRTYDEDPAFAARARGYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G     K   +L++    +   I    +V     + RDD+   ++ +D+  +   
Sbjct: 215 VKLQSGDRYCRKMWKQLVDITMTQNQLIYDRMNV----TLTRDDVMGESLYNDMLPA--- 267

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                      I+ +L  +G   E       S+      +D  +        G+ +   +
Sbjct: 268 -----------IVSDLKAKGLAVE-------SEGATVVFLDEYK-----NKEGEPMGVIV 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE    D ++Y + S    +       V++   V  ++  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSIPL 364

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           +     ++L       +DG P K   RAG  I L  ++DE                    
Sbjct: 365 EHHMFGMMLG------KDGKPFK--TRAGGTIKLSDLLDEAVDRAAKLVAVKNPDMPADE 416

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A 
Sbjct: 417 LAALANIVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKA- 474

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                    +    V       +  E  L V L ++   I        P+ +  YLYDLA
Sbjct: 475 --------GIDAEAVGGTTRIIEDREAALAVRLLQFDETITQVARDGMPHVMCAYLYDLA 526

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F G + H         + A +      RL+L    A  +  GL+ +G+E+   M
Sbjct: 527 GLFSGFYEH------CPILNAEDDATRQSRLRLALLTAKTLKQGLDTLGIETVERM 576


>gi|225871422|ref|YP_002747369.1| arginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782983|sp|C0MAS8|SYR_STRE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225700826|emb|CAW95535.1| arginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 563

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 252/604 (41%), Gaps = 117/604 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  RI      + V   G  ++N +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKALRKAPQAIASDLAERIDAS-QFEKVAAVGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L+ ++  G +Y +   G+G  + I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKASISAQVLTQVIADGADYAQQDEGQGRHIAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  +  +   
Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGNEAAVQAHPIDELLKLYVRINAEAET 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269
               D+ + E     EE      +D     + +  RD+ L   N  +D      D + G+
Sbjct: 203 DPSLDEEAREWFRRLEE------RDQEATELWQWFRDESLIEFNRLYDQLGVSFDSYNGE 256

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 + ++++ L  +G + E       SK  +  ++++             ++ P L 
Sbjct: 257 AFYNDKMDEVLELLEDKGLLVE-------SKGAKVVNLEKY-----------GIEHPALI 298

Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV           
Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAV----------- 345

Query: 382 NVLLCELVRLYRDGMP-----------IKMSKRAGDFITLRHVVDE-------------- 416
              L E+   + D M             K+S R G+ I L   V E              
Sbjct: 346 ---LKEMGYDWSDDMTHVAFGLVTKGGAKLSTRKGNVILLEPTVAEAISRAANQIEAKNP 402

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSI 464
                      VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI
Sbjct: 403 KLANKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSI 460

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A           F        S  D    ++I  + ++PR+I+ A    EP  +A +
Sbjct: 461 LRKAS----------FTPATDTSYSLNDPESWEIIKLIQDFPRIIKRAFDNFEPSIMAKF 510

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
              LA  F+ +++H R   ++P     + +N      RL L +A A ++   L ++GVE+
Sbjct: 511 AIHLAQSFNKYYAHTRILEDDP-----ERDN------RLALCYATAIVLKEALRLLGVEA 559

Query: 582 PNEM 585
           PNEM
Sbjct: 560 PNEM 563


>gi|58337861|ref|YP_194446.1| arginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904511|ref|ZP_04022316.1| arginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75357337|sp|Q5FIQ9|SYR_LACAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|58255178|gb|AAV43415.1| arginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867720|gb|EEJ75141.1| arginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 561

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 140/600 (23%), Positives = 258/600 (43%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ +  +P  IA+ I   +  D +  ++   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTMHKNPAIIAKDIAENLNSD-NFANIQAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG   +G+G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLIASTLKDVLAEKEHYGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMKKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMSLFHYYV-- 192

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQAM----------MKIIRDDLKALNIQH 256
               K+  E  N PE      +W   ++D   +A+          +K  +   K L +  
Sbjct: 193 ----KFHKEAENNPELDNEGREWFKKLEDGDPEAVELWKWFREVSLKDFKRIYKELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKDKGLLHE-------SRGAQVVDM------------ 285

Query: 317 GDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV---- 370
           G+D +  ++ KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V    
Sbjct: 286 GEDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKM 345

Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                                 +S +K  + V L +++R   +    ++ ++  D     
Sbjct: 346 GYDWADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLRDAVNLAKKQIQEKNPDLADQD 404

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQA 468
            V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A
Sbjct: 405 QVAHDVGVGAVVFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKA 460

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSE---LQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             +              P E +F+ ++     +   LA++PR++  +    EP  +A + 
Sbjct: 461 AAMGEK-----------PSEGDFNINDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFA 509

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 510 LDLAKKFNKYYAN------VKILTKDDQ--IGARLALVQATSIVLTESLRLLGVNAPKEM 561


>gi|77456627|ref|YP_346132.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|109895021|sp|Q3KJB3|SYR_PSEPF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77380630|gb|ABA72143.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 578

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 135/572 (23%), Positives = 234/572 (40%), Gaps = 86/572 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE I+A +  D +V    IAG GFIN 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPADENVTKAEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   +  ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTQALASRLDAALADA-HVGVRKAGPAQRTVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L    + +      +  SDL   Y           
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGMLM--AYLQENPITSDELSDLENFYRAAKQRFDESP 206

Query: 212 ELADKYSSEL--LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           E AD+    +  L   + + L +    KD S+    KI   +L  + +     + E  ++
Sbjct: 207 EFADRARGLVVKLQAGDAECLALWTKFKDISLSHCQKIY--ELLNVKLTMADVMGESAYN 264

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 + +++++L   G + E       S   Q   +D     F++   G+ +   ++K
Sbjct: 265 ----DDLINVVNDLKAAGMLVE-------SNGAQCVFLDE----FKNAE-GEPLPVIIVK 308

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +DG Y Y   DLA    +Y  G    D  +Y +    + + +++ AVA     +KA    
Sbjct: 309 ADGGYLYATTDLA--AVRYRSGKLKADRALYFVDQRQALHFQQVFAVA-----RKAGFVT 361

Query: 384 LLCELVRL--------------YRDGMPIKM-------SKRAGDFIT----------LRH 412
              E+  +               RDG  +K+        +RA   +           LR 
Sbjct: 362 HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQERAYALVKEKNPTLADDELRS 421

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+ +  +
Sbjct: 422 IAKVVGIGAVKYADLSKHRTSDYSFNFDQML-NLEGNTAPYLLYAYTRVAGVFRKLEKEY 480

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            ++D  +      PQE +       L   LA++  V+ N      P+ L  YLY++A +F
Sbjct: 481 SEVDGQIVLE--APQEHD-------LAAKLAQFGEVLNNVAEKGTPHTLCTYLYEVAGLF 531

Query: 533 HGHWSH----GRENP-----RLRFVQANNRKL 555
              +        E P     RLR      R L
Sbjct: 532 SSFYEKCPILTAETPAQMQSRLRLAALTGRTL 563


>gi|93141321|sp|Q8KPU9|SYR_SYNE7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 584

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 234/590 (39%), Gaps = 104/590 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N AM L++ LG  P  IAE +V  + +    +   IAG GFIN  L PSYL   L
Sbjct: 40  GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +       G   +    +V ++F S N    MHVGH R  ++GD++A ++ F G+EV 
Sbjct: 100 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210
           R  ++ D G Q   L   +  +Y QAL   D    SDL   Y            + +   
Sbjct: 159 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 218

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + D  S E      + W         Q +    R + + +  + DI + E      +P
Sbjct: 219 QRVVDLQSGEATA--RQAW---------QLLCDQSRREFQKIYDRLDIQLEERGESFYNP 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328
             +  I+++L R G + E              D   + +        +    PL+  KSD
Sbjct: 268 Y-LPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQKSD 312

Query: 329 GSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383
           G Y Y   DLA    +Y  G D    +IYV  S  + +  ++  VA  A      AQI  
Sbjct: 313 GGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQIEH 370

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +   LV+   DG   K+  RAGD + LR ++DE                           
Sbjct: 371 VPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEFIEA 427

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    F F K+    + N   Y+ YAY R + I R+    F
Sbjct: 428 VAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGGIDF 486

Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             LD    P   +   P E       LQL   L E  R +        P +L  YL++L+
Sbjct: 487 AQLD----PVAAVLTEPTERSLAKQVLQLGEVLDEVARDL-------LPNRLCSYLFELS 535

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             F+  +       R   + A   + T  RL L    A  +  GL+++G+
Sbjct: 536 QTFNQFYD------RCPILNAEEPQRT-SRLLLCDLTARTLKLGLSLLGI 578


>gi|330899266|gb|EGH30685.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 578

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 247/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  + GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIFGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTHFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKASGLLVE-------SNGAQCVFLEE----FRTA---DDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|320160730|ref|YP_004173954.1| arginyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994583|dbj|BAJ63354.1| arginyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 587

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 129/558 (23%), Positives = 244/558 (43%), Gaps = 112/558 (20%)

Query: 84  AGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A KG++NLY S S Y ++++  ++  G E+G+       +V +EF   N     HVGH R
Sbjct: 86  AVKGYLNLYFSSSEYAQRVIDQVLEEGSEFGKG-PSLNQQVMVEFSQPNTHKAFHVGHLR 144

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY-- 200
            A++GD+++ ++ F+GY+V R  Y  D G  +    +   W Y +  ++N    P G   
Sbjct: 145 SAILGDSISRILEFAGYDVIRANYPGDIGLHV----IKWLWNYMK--FHNGEKPPAGATT 198

Query: 201 -YPGVYLKHVGKELA----------------DKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
            + G       + L                 DK   E++   EE      +++S+Q    
Sbjct: 199 RWMGDLYAEANRRLEENPELESEVRALYARWDKRDPEIVRLWEE-----TREWSLQGF-- 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R+  + L+I+ DI+     F+     P +++++ L ++G   +     P+     K D
Sbjct: 252 --REMYRTLDIRFDIYY----FNSMVEHPGKEVVEELIQKGIAQD---ERPEGPVIVKLD 302

Query: 304 --MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---IYVMGS 358
             +  K+  +R  ++        L+SD +  Y   DLA  K K+   + N+    YV+  
Sbjct: 303 ELLGLKEEKYRVLVI--------LRSDNTALYATEDLALAKRKFS-DYPNLYRSYYVVDV 353

Query: 359 DHSGYVKRL-EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             S + +++ + +  A  E   +   +  ELV L  +   + M+ R G  + L  ++ E 
Sbjct: 354 RQSLHFQQVFKTLELAGYEWANRCQHIPYELVNLPGN---VVMASREGTVVLLEDLIREA 410

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449
                                     VG  ++++ ML R+N++++ FD+    +   +  
Sbjct: 411 TARALQVVEEKNPELLPEQKQQVAQAVGIGAIKYPMLARENTKIVTFDWQTALDFNGQAA 470

Query: 450 PVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           P  Y+QYA+ R  SI R+A  +    ++++ + P            +ELQLI  ++ +P+
Sbjct: 471 P--YIQYAHVRASSILRKAGGVPLHAEVNYPMMP------------AELQLIDLISRFPK 516

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++ A    +P  +A   Y+LA  F   ++   E P    V      +   RL+LV A  
Sbjct: 517 EVQRAASELKPLHIANAAYELAKTFSDFYN---ECP----VLTAEEPVRNGRLRLVAATR 569

Query: 568 SIINSGLNIIGVESPNEM 585
             I + L ++G+++P  M
Sbjct: 570 QTIANALGLLGIQAPEVM 587


>gi|296101787|ref|YP_003611933.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056246|gb|ADF60984.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 577

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 243/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +        IAG GFIN++L P++L    
Sbjct: 37  GDYQANGVMAVAKKLGMPPRQLAEQVLTHLDLTGIASKTEIAGPGFINIFLEPAFL---- 92

Query: 103 SSIVVSGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +S V + ++  R  + +     V I++ + N    MHVGH R  ++GD     + F G++
Sbjct: 93  ASHVDAALKSDRLGVAQPEPQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK      Y ++   K++           DI +S++   ++R + +  
Sbjct: 203 DEAFAERARSYVVKLQGGDPYFLEMWRKLV-----------DITMSQNQLTYNRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKHL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V   V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDCVPLEHHMFG 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 371 MMLG------KDGKPFKT--RAGGTVKLSDLLDEALERARRLVAEKNPDMPAEELEKLAN 422

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++
Sbjct: 423 AVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NI 476

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D  +     +   +  +  E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 477 DESVLANATV---TITEDREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAENESVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|300867420|ref|ZP_07112075.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300334610|emb|CBN57243.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 581

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 217/533 (40%), Gaps = 74/533 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    NAAM L++ LG  P  IA  I+  + +    ++  IAG GFINL L P YL   +
Sbjct: 36  GDYQCNAAMSLTKKLGKPPRAIASAIIENLDVADLCETPTIAGPGFINLTLKPEYLEGEV 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++I  +    G        +V I+F S N    MHVGH R  ++GD LA ++ F G++V 
Sbjct: 96  NAIA-NNPRLGIAPTKTPQRVAIDFSSPNIAKEMHVGHLRSTIIGDCLARILEFQGHDVL 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L   +   Y +AL   D+ DL               +L D Y    
Sbjct: 155 RLNHVGDWGTQFGMLIAYLREVYPEALTTADALDL--------------GDLVDFYRKAK 200

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NL 280
             F E++         V  +     D  +A N+     + E    R +   I D++D  L
Sbjct: 201 KRFDEDETFKETARQEVVRLQAGAEDTRRAWNL-----LCEQ--SRREFQVIYDLLDIKL 253

Query: 281 ARQGYVYEGILPPPKSKTTQKC-----DMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTY 333
             +G  +   L P   +   K      D   K +        +    PL+  KSDG + Y
Sbjct: 254 TERGESFYNPLLPGVVEDLTKLGLLVEDNGAKCVFIEGFTNKEGEPLPLIVQKSDGGFNY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRL 391
              DLA  + + E+ G + +IYV  S  + +  +   VA         + ++     + L
Sbjct: 314 ATTDLAALRYRIEKDGANRLIYVTDSGQANHFAQFFQVARKAGWIPDDVEIVHVPFGLVL 373

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSD 420
             DG   K   R+G+ + LR ++DE                               +G  
Sbjct: 374 GEDGK--KSKTRSGETVRLRDLLDEAIVRSRADLEKRLQEEKREETEEFIANVAKVIGLS 431

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    F + K+ +  K N   Y+ YAY R + I R+ +  F +L  D  
Sbjct: 432 AVKYADLSQNRTSNYTFSYDKMLDL-KGNTAPYLLYAYVRVKGIGRKGEINFDNLGAD-- 488

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
              VI +E     +EL L  HL +   V+        P ++  YL++L+  F+
Sbjct: 489 -AKVILKED----AELVLAKHLLQLSEVVGAVEGDLLPNRICQYLFELSQKFN 536


>gi|218548565|ref|YP_002382356.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701420|sp|B7LPH0|SYR_ESCF3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218356106|emb|CAQ88723.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|325496983|gb|EGC94842.1| arginyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 577

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 246/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPTFLAENV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALKSD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR  K    + +    P 
Sbjct: 430 KYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFR--KAEIAEEELAAAP- 485

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F   + H    
Sbjct: 486 -VIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|123442647|ref|YP_001006624.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166200587|sp|A1JRM9|SYR_YERE8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122089608|emb|CAL12457.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 576

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 136/582 (23%), Positives = 246/582 (42%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +D     V IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAIAKKLGMQPRQLAEKVIELLDLDGIASKVEIAGPGFINIFLDRQWVASKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +   + G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+      G+    +  + A K   E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270
             F +     +VK     +Y  Q   K++   +    I +D   + +++DD   G+    
Sbjct: 204 EEFAKRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM-GESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + + +I+ +L  +G   E      +  T    D  + +        G+ +   + K DG 
Sbjct: 263 TMLPEIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +K+S       +RAG  I           L+ VV+ VG  +V+
Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +      N   Y+QYAY R  S+F++A     +L   L    
Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDESNLTLPL---- 485

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           VI ++ E       L   L ++  +I        P+ +  YLYDLA +F   + H     
Sbjct: 486 VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + A++ +    RL+L    A  +  GL+ +G+++   M
Sbjct: 536 -CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|157145345|ref|YP_001452664.1| arginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166232776|sp|A8AFG5|SYR_CITK8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157082550|gb|ABV12228.1| hypothetical protein CKO_01085 [Citrobacter koseri ATCC BAA-895]
          Length = 577

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 142/590 (24%), Positives = 246/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + K  K  V I++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----ERLGVAKPAKQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216
           V R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKK 198

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274
           +  E   F E     +VK   +Q       D  + L    DI ++++   ++R + +  R
Sbjct: 199 HYDEDEAFAERARNYVVK---LQGGDPYFLDMWRKLV---DITMTQNQITYNRLNVTLTR 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K++     + +   ++F        G+ +   + K DG Y
Sbjct: 253 DDVMGESLYNPMLPGIVADLKAQGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383
            Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     +
Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGM 371

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +L       +DG P K   RAG  + L  ++DE                           
Sbjct: 372 MLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANA 423

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D
Sbjct: 424 VGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EID 477

Query: 477 FD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              L    V+ +E      E QL   L ++   +        P+ +  YLYD+A +F G 
Sbjct: 478 ESALSSAPVVIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDIAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|324113611|gb|EGC07586.1| arginyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 577

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 246/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAENV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALKSD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR  K    + +    P 
Sbjct: 430 KYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFR--KAEIAEEELAAAP- 485

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            VI +E      E QL   L ++   +        P+ +  YLYDLA +F   + H    
Sbjct: 486 -VIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEH---- 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 --CPILSAENEEVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|323255049|gb|EGA38837.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
          Length = 577

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 240/586 (40%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              + S     R  + + T+  + +++ + N    MHVGH R  ++GD     + F G+ 
Sbjct: 97  QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L   + W  +Q    N  D+      G Y        A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278
              F E     +VK  S  A  + +   L       DI ++++   + R + +  RD + 
Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K+K     + +   ++F        GD +   + K DG Y Y  
Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++L  
Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
                +DG  +K   RAG  + L  ++DE                           VG  
Sbjct: 375 -----KDGNRLK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479
           +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D   L
Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI  E      E QL   L ++   +        P+ +  YLYD+A +F G + H 
Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|260663474|ref|ZP_05864364.1| arginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552015|gb|EEX25068.1| arginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 562

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 104/596 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP+D  +G  +      L++ L   P  IA  +  +I      + V +AG  +IN +L
Sbjct: 27  LERPKDAKNGDYAF-PTFFLAKELHRAPQVIASELAEQID-QSGFERVVVAGP-YINFFL 83

Query: 94  SPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  +IL++++     YG   +G    V I+  S N   PM +GH R  V+G+ +A+
Sbjct: 84  DKASVGGEILAAVLADPANYGSTDLGHQGHVTIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207
           ++A   Y   R  ++ D G Q   L A    W  +  +  +  +  + YY  +  +    
Sbjct: 144 ILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGDEAEVQKDPINTLQKYYVKINTEADEH 203

Query: 208 ----HVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                +G+E   K        PE     KW    ++ S+Q  MKI       L+I  D F
Sbjct: 204 PEYDDLGREWFAKLEQ---GDPEAQRLWKWF---REVSLQRFMKI----YNLLDIDFDSF 253

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++      + +++  L  +  + E       S+  +  D+++  L     M+   
Sbjct: 254 NGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIVDLEKYDL--NPAMI--- 297

Query: 320 VDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 KSDGS  Y   DLA   + K  Y       +YV+G++ S +  +L+AV + +  
Sbjct: 298 -----RKSDGSTLYLTRDLAAALFRKRMYHHA--QSLYVVGAEQSNHFAQLKAVLSEMGF 350

Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------------------ 411
             + QI+ +   L+ L  +G   KMS R G+ I L                         
Sbjct: 351 TWSDQIHHIPFGLMSL--NGK--KMSTRKGNIIQLEDVLNDSIKLARQQIEEKNPTLANA 406

Query: 412 -HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAK 469
             V +EVG  +V F  L  + +  +DF   +V K + +  P  YVQYA+AR  SI R+A 
Sbjct: 407 DQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGETGP--YVQYAHARAESILRKAG 464

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  F+     V  QE+       ++   + +Y   I  A    +P  +  Y   LA
Sbjct: 465 RP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEYDPSLIGKYALSLA 514

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H       R ++ +++KL+  RL LV AV+ ++ S L ++GV++P+EM
Sbjct: 515 KSFNQYYAH------TRILEEDDQKLS--RLALVQAVSDVLKSALALLGVKAPDEM 562


>gi|283785614|ref|YP_003365479.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949068|emb|CBG88673.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 577

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 244/589 (41%), Gaps = 94/589 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAENV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S  E     I +   V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  QQALNS--ERLGVAIPEKQTVVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E  
Sbjct: 155 RANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDEDE 204

Query: 223 NFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRD 275
            F E     +VK     +Y +Q   K++           DI +S++   + R + +  RD
Sbjct: 205 AFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLTRD 253

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYT 332
            +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y 
Sbjct: 254 DVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYL 312

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVL 384
           Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     ++
Sbjct: 313 YTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMM 372

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------V 417
           L       +DG P K   RAG  + L  ++DE                           V
Sbjct: 373 LG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAV 424

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR++      LD 
Sbjct: 425 GIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKS-----GLDE 478

Query: 478 D-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             L    VI +E      E QL   L ++   +        P+ +  YLYD+A +F G +
Sbjct: 479 SALAAAPVILREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFY 534

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            H         + A N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 535 EH------CPILSAENDEVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|330984740|gb|EGH82843.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 578

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + ++++ L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNYLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEVEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L     S +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGSTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|298485092|ref|ZP_07003188.1| Arginyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160344|gb|EFI01369.1| Arginyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 578

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|62897153|dbj|BAD96517.1| arginyl-tRNA synthetase variant [Homo sapiens]
          Length = 660

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 254/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   I
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVSL-I 331

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
              E  +  G    + DI+     +G+V              + D D ++++F   + G 
Sbjct: 332 ERGESFYQDG----MNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLAAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|184155809|ref|YP_001844149.1| arginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|229470718|sp|B2GDD7|SYR_LACF3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|183227153|dbj|BAG27669.1| arginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 562

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 104/596 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP+D  +G  +      L++ L   P  IA  +  +I      + V +AG  +IN +L
Sbjct: 27  LERPKDAKNGDYAF-PTFFLAKELHRAPQVIASELAEQID-QSGFERVVVAGP-YINFFL 83

Query: 94  SPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  +IL++++     YG   +G    V I+  S N   PM +GH R  V+G+ +A+
Sbjct: 84  DKASVGGEILAAVLADPANYGSTDLGHQGHVTIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207
           ++A   Y   R  ++ D G Q   L A    W  +  +  +  +  + YY  +  +    
Sbjct: 144 ILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGDEAEVQKDPINTLQKYYVKINTEADEH 203

Query: 208 ----HVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                +G+E   K        PE     KW    ++ S+Q  MKI       L+I  D F
Sbjct: 204 PEYDDLGREWFAKLEQ---GDPEAQRLWKWF---REVSLQRFMKI----YNLLDIDFDSF 253

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++      + +++  L  +  + E       S+  +  D+++  L     M+   
Sbjct: 254 NGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIIDLEKYDL--NPAMI--- 297

Query: 320 VDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 KSDGS  Y   DLA   + K  Y       +YV+G++ S +  +L+AV + +  
Sbjct: 298 -----RKSDGSTLYLTRDLAAALFRKRMYHHA--QSLYVVGAEQSNHFAQLKAVLSEMGF 350

Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------------------ 411
             + QI+ +   L+ L  +G   KMS R G+ I L                         
Sbjct: 351 TWSDQIHHIPFGLMSL--NGK--KMSTRKGNIIQLEDVLNDSIKLARQQIEEKNPTLANA 406

Query: 412 -HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAK 469
             V +EVG  +V F  L  + +  +DF   +V K + +  P  YVQYA+AR  SI R+A 
Sbjct: 407 DQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGETGP--YVQYAHARAESILRKAG 464

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  F+     V  QE+       ++   + +Y   I  A    +P  +  Y   LA
Sbjct: 465 RP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEYDPSLIGKYALSLA 514

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H       R ++ +++KL+  RL LV AV+ ++ S L ++GV++P+EM
Sbjct: 515 KSFNQYYAH------TRILEEDDQKLS--RLALVQAVSDVLKSALALLGVKAPDEM 562


>gi|28378123|ref|NP_785015.1| arginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556331|ref|YP_003062748.1| arginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|38258334|sp|Q88X53|SYR_LACPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28270958|emb|CAD63862.1| arginine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045258|gb|ACT62051.1| arginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 562

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 148/603 (24%), Positives = 264/603 (43%), Gaps = 100/603 (16%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
            ++ ILD+I  E+P+    G L+      L++ L   P  IA  IV ++    D + V  
Sbjct: 19  TQEAILDKI--EQPKTSKQGDLAF-PTFTLAKTLHKAPQMIASDIVEKVD-SSDFEKVVA 74

Query: 84  AGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            G  ++N +    ++   IL+ ++ +G  +G   +G+  +V I+  S N   P+ +GH R
Sbjct: 75  MGP-YVNFFFKKDAFAADILNQVLSNGGHFGDAKLGEAGQVPIDMSSPNIAKPISMGHLR 133

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY 201
             V+G++LA++++   Y+  +  ++ D G Q   L  +   W  +  +  +  +    YY
Sbjct: 134 STVIGNSLANILSKLDYQPVKINHLGDWGTQFGKLITAYKMWGSEAEVKADPINNLLKYY 193

Query: 202 PGVYLKHVGKELADKYSSE----LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKAL 252
              + + V     D  + E    L N  EE      W    +  S++A  KI +     L
Sbjct: 194 VRFHKEDVDHPEMDDEAREWFKKLENGDEEATHLWSWF---RSESLKAFKKIYQ----RL 246

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +I  D F  E  ++      +++++D L  +  + E       S+  +  D+ +  L   
Sbjct: 247 DIDFDSFKGEAFYN----DKMQEVVDILEDKHLLQE-------SQGAEVVDLSKYDL--- 292

Query: 313 STMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL 367
                     P L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L
Sbjct: 293 ---------NPALIKKSDGATLYITRDLAAAIYRKRTYD--FVQSLYVVGNEQTNHFKQL 341

Query: 368 EAVAAAVSEKKA-QINVLLCELVR------LYRDGMPIKMSKRAGDFITLRH-------- 412
           +AV   +    A QI+ +   L+         R G  I + K   D + L H        
Sbjct: 342 KAVLTEMGFDWADQIHHIPFGLITSGGKKLSTRSGRVILLDKVLDDAVALAHEQIEAKNP 401

Query: 413 -------VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462
                  V D VG  +V F  L  KN  +  FDF     V+ + +  P  YVQYA+AR  
Sbjct: 402 DLPNKDEVADAVGIGAVVFHDL--KNERMNSFDFNLEEVVRFEGETGP--YVQYAHARAE 457

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A            P     +++  D +    +  L+E+P  +  A+   EP  +A
Sbjct: 458 SILRKAGS----------PEIAATEQTLSDPAAWDTLKLLSEFPATVVRASTEYEPSVIA 507

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y   LA  ++ ++++ +       +   + +L   RL LV +V+ ++   L ++GV++P
Sbjct: 508 KYAIHLAKAYNKYYANTK-------ILVEDDELN-ARLALVKSVSIVLKEALRLLGVKAP 559

Query: 583 NEM 585
           +EM
Sbjct: 560 DEM 562


>gi|227515597|ref|ZP_03945646.1| arginine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086027|gb|EEI21339.1| arginine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|299783442|gb|ADJ41440.1| Arginine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 562

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 104/596 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERP+D  +G  +      L++ L   P  IA  +  +I      + V +AG  +IN +L
Sbjct: 27  LERPKDAKNGDYAF-PTFFLAKELHKAPQMIASELAEQID-QSGFEKVVVAGP-YINFFL 83

Query: 94  SPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  +IL++++     YG   +G    V I+  S N   PM +GH R  V+G+ +A+
Sbjct: 84  DKASVGGEILAAVLADPANYGSTDLGHQGHVTIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207
           ++A   Y   R  ++ D G Q   L A    W  +  +  +  +  + YY  +  +    
Sbjct: 144 ILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGDEAEVQKDPINTLQKYYVKINTEADEH 203

Query: 208 ----HVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                +G+E   K        PE     KW    ++ S+Q  MKI       L+I  D F
Sbjct: 204 PEYDDLGREWFAKLEQ---GDPEAQRLWKWF---REVSLQRFMKI----YNLLDIDFDSF 253

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++      + +++  L  +  + E       S+  +  D+++  L     M+   
Sbjct: 254 NGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIIDLEKYDL--NPAMI--- 297

Query: 320 VDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 KSDGS  Y   DLA   + K  Y       +YV+G++ S +  +L+AV + +  
Sbjct: 298 -----RKSDGSTLYLTRDLAAALFRKRMYHHA--QSLYVVGAEQSNHFAQLKAVLSEMGF 350

Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------------------ 411
             + QI+ +   L+ L  +G   KMS R G+ I L                         
Sbjct: 351 TWSDQIHHIPFGLMSL--NGK--KMSTRKGNIIQLEDVLNDSIKLARQQIEEKNPTLANA 406

Query: 412 -HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAK 469
             V +EVG  +V F  L  + +  +DF   +V K + +  P  YVQYA+AR  SI R+A 
Sbjct: 407 DQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGETGP--YVQYAHARAESILRKAG 464

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  F+     V  QE+       ++   + +Y   I  A    +P  +  Y   LA
Sbjct: 465 RP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEYDPSLIGKYALSLA 514

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H       R ++ +++KL+  RL LV AV+ ++ S L ++GV++P+EM
Sbjct: 515 KSFNQYYAH------TRILEEDDQKLS--RLALVQAVSDVLKSALALLGVKAPDEM 562


>gi|109897684|ref|YP_660939.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064815|sp|Q15W53|SYR_PSEA6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109699965|gb|ABG39885.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 578

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 246/590 (41%), Gaps = 77/590 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R      G    N AM L++ L   P  IAE IV  +++D   + + +AG GFIN+YL
Sbjct: 28  LSRATKVGFGDYQFNGAMALAKVLKQKPRDIAEKIVEAVELDGIAEKLEVAGPGFINIYL 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L   LS    +  +   N+  + TK V +++ S N    MHVGH R  ++GD +  
Sbjct: 88  SKEWLAAQLSH---AAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTIIGDAVVK 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
            + F G++V R+ ++ D G Q   L           L + +  L         L     +
Sbjct: 145 ALEFMGHKVIRQNHMGDWGTQFGML-----------LAHLNDKLESNQVAETAL----SD 189

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-----IFISEDDFHR 267
           L D Y    + F EE+      D + + ++K+   D   L +  +     I  SE+ +H+
Sbjct: 190 LEDFYREAKVRFDEEEGFA---DRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHK 246

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPL 324
            + S  RD I   +   +    ++   ++K     +    Q++F   +    G+     +
Sbjct: 247 LNVSLTRDDIMGESAYNHDLANVVSELQAKGL-AVESQGAQVVFLPELADKEGNPAAYIV 305

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            KS G Y Y   DLA  + + ++   D  + +  +  + + K+ E VA      + +   
Sbjct: 306 QKSGGGYLYATTDLAAIRHRNKQLHADRTLILTDARQALHFKQTELVARKAGFIEPEQTY 365

Query: 384 LLCEL-VRLYRDGMPIK-----------------------MSKRAGDFIT--LRHVVDEV 417
             C   + L  DG P K                       +SKR  D  +  L+ + +++
Sbjct: 366 EHCPFGMMLGNDGRPFKTRTGGTVKLVELLDEAVERAETLLSKRETDLSSDELKVLANKI 425

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           G  +V++  L +  +   D+ F      S E N   Y+QYAY R  SIFR+A      L+
Sbjct: 426 GIGAVKYADLSKNRT--TDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHQTLN 483

Query: 477 FDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               P ++  PQE      +LQ       Y   I        P+ L  YLY+LAS+F   
Sbjct: 484 ---APISLDAPQEKILAVKQLQ-------YVEAINQVIAEGTPHVLCTYLYELASLFMSF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      P L+      + +   R+ L    A  + SGL+++G+++   M
Sbjct: 534 Y---EACPMLK--DGIEQDVRDSRMTLAALTAKTLQSGLSLLGIDTMERM 578


>gi|170024389|ref|YP_001720894.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688454|sp|B1JLM2|SYR_YERPY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169750923|gb|ACA68441.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 576

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGTK------VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     +AF
Sbjct: 92  ---VAEKVEYALTAPKLGVTPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  ++  D L  + +  D 
Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E      +  T    D  + +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A   
Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    VI ++ E       L   L ++  +I        P+ +  YLYDLA +
Sbjct: 478 ESSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|326928305|ref|XP_003210321.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 648

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 136/586 (23%), Positives = 251/586 (42%), Gaps = 78/586 (13%)

Query: 43  GHLSTNAAM------ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM      + +R   + P  IAE I   I  +  ++ V IAG GFIN++L   
Sbjct: 98  GDYQCNSAMGITQILLKTREQKVSPREIAEKITKHIPANECIEKVEIAGPGFINVHLRKD 157

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           ++ K LSS++V+G++     IGK  +V ++F S N    MHVGH R  ++G+++  L  F
Sbjct: 158 FVSKQLSSLLVNGVQ--PPAIGKRKRVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEF 215

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELA 214
           +GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E  
Sbjct: 216 AGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKRRFDTEEEF 274

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            K + + +   + K    +K + +  +  + R + + +    D+ ++E    RG+     
Sbjct: 275 KKRAYQCVVLLQSKDPDFIKAWEL--ICDVSRKEFQKIYNCLDVTLTE----RGESFYQD 328

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++DI+     +G+V              + D  RK +     + G  V   ++KSDG Y
Sbjct: 329 MMKDIVKEFEDKGFV--------------QVDDGRKVVF----VPGFSVPLTIVKSDGGY 370

Query: 332 TYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           TY  +DLA  + +   E+G D +IYV+ S  S +++ + A    +      +  +     
Sbjct: 371 TYDTSDLAALRHRLLEEKG-DILIYVVDSGQSVHLQTVFAAGQMIGWYDPTVTRITHAAF 429

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSD 420
            +       K   R+GD + L  +++E                             V   
Sbjct: 430 GVVLGEDKKKFKTRSGDAVRLMDLLEEGLKRAMDKLKDKERDKVLTPEELKAAQVSVAFG 489

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +++  L         F F K+ +  + N   Y+ YA+ R R+I R A     ++D ++ 
Sbjct: 490 CIKYADLSHNRLNDYVFSFDKMLD-DRGNTAAYLLYAFTRIRAIARLA-----NIDEEML 543

Query: 481 PRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            +    +    D   E +L   +  +P +++        + L  YLY+LA+ F   + + 
Sbjct: 544 RKAAREEALVLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDNC 603

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + R       K+ M RL L  A A+I+  G +I+G++    M
Sbjct: 604 YCVEKDR-QSGQIVKVNMWRLLLCEATATIMAKGFDILGIKPVERM 648


>gi|322386535|ref|ZP_08060162.1| arginine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269454|gb|EFX52387.1| arginine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 562

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/606 (24%), Positives = 252/606 (41%), Gaps = 122/606 (20%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KIDP      +A   ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDPSHFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + +  +++  ++  G +YG+   G+G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LNKAKISDQVIKEVIKEGADYGQQNEGQGGNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D               
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGNKEAVEANPID--------------- 187

Query: 211 KELADKY---SSELLNFP---EEK--WLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            EL   Y   ++E+ N P   EE   W   ++D   +A  + +  RD+ L   N  +++ 
Sbjct: 188 -ELLQLYVRINAEIENDPALDEEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELL 246

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             E D   G+      + + +  L  +G + E       SK     D+D           
Sbjct: 247 GVEFDSLNGEAFYNDKMDEAVKILEDKGLLKE-------SKGASIVDLD----------- 288

Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
             DV+ P   + KSDG+  Y   D+A    +     F   +YV+G + S + ++L+AV  
Sbjct: 289 --DVNLPPAMIKKSDGATLYITRDIATAMYRARTYNFVKNVYVVGQEQSNHFRQLKAVLK 346

Query: 373 AV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            +    S+    ++  L    R        K+S R G+ I L   + E            
Sbjct: 347 KMGFDWSDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEK 399

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462
                        VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +
Sbjct: 400 NPNLENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQ 457

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A D  P LD + +  N        D    ++I  L ++ RV++ A    EP  +A
Sbjct: 458 SILRKA-DFKPSLDVN-YNLN--------DAESWEIIKLLQDFARVVKRAADNFEPSLIA 507

Query: 523 FYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y   LA  F+ +++H R   E+P               RL L +  A ++   L ++GV
Sbjct: 508 KYAISLAQAFNKYYAHTRILDESPERD-----------SRLALSYTTAVVLKEALRMLGV 556

Query: 580 ESPNEM 585
           E+P +M
Sbjct: 557 EAPEKM 562


>gi|307710197|ref|ZP_07646641.1| arginyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619177|gb|EFN98309.1| arginyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 563

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 255/592 (43%), Gaps = 93/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQSFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVITEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPIDELLKLYVRINAEAEN 202

Query: 211 KELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDF 265
               D+ + E    L   +EK L + + +  +++++  R  ++LK   ++ D +  E  +
Sbjct: 203 DPSLDEEAREWFRKLENGDEKALSLWQWFRDESLVEFNRLYNELK---VEFDSYNGEAFY 259

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      +  ++D L+++G + E       S+  Q  ++++             ++ P L
Sbjct: 260 N----DKMDAVVDILSKKGLLVE-------SEGAQVVNLEKY-----------GIEHPAL 297

Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKA 379
             KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +  +   
Sbjct: 298 IKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWSG 355

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
            I  +   LV   ++G   K+S R G+ I L   V E                       
Sbjct: 356 DITHVPFGLVT--KEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H       R +  N  + +  RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAH------TRILDENAERDS--RLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|157371031|ref|YP_001479020.1| arginyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987305|sp|A8GFK2|SYR_SERP5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157322795|gb|ABV41892.1| arginyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 576

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 251/581 (43%), Gaps = 79/581 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      V IAG GFIN++L+  ++ +  
Sbjct: 37  GDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDVASKVEIAGPGFINIFLNSQWVAQ-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +  V+S  +     + + T V I++ + N    MHVGH R  ++GD  A    F G++V 
Sbjct: 96  ADRVLSAPKLDIAPVKQQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+        Y +      A K+  E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDMGLSDLEQFYRE------AKKHYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274
            +F E     +VK      Y ++   K++           DI ++++   ++R + +   
Sbjct: 204 ADFAERARAYVVKLQGGDQYCLKMWRKLV-----------DITMAQNQLTYNRLNVTLTE 252

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y
Sbjct: 253 DDVMGESLYNAMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKDGEPMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383
            Y   D+A  K +YE  G D ++Y + S    +       V++   +  ++S +     +
Sbjct: 312 LYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGM 371

Query: 384 LLCELVRLY--RDGMPIKMSK-------RAGDFIT----------LRHVVDEVGSDSVRF 424
           +L +  + +  R G  +K+S        RAG  I           ++ + + VG  +V++
Sbjct: 372 MLGKDGKPFKTRSGGTVKLSDLLDEAVDRAGKLIAEKNPDMPAEEMQSLANAVGIGAVKY 431

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L +  +    FD+  +    + N   Y+QYAY R  S+F++A     +L   L    V
Sbjct: 432 ADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVASVFKRAGVDESNLTLPL----V 486

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           + +E E     + L   L ++  VI        P+ +  YLYDLA +F G + H      
Sbjct: 487 MTEERE-----ITLATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSGFYEH------ 535

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + A++ +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 536 CQILNADSEEARQSRLKLSLLTAKTLKVGLDTLGIETVERM 576


>gi|300769179|ref|ZP_07079067.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180300|ref|YP_003924428.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300493208|gb|EFK28388.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045791|gb|ADN98334.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 562

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 148/603 (24%), Positives = 264/603 (43%), Gaps = 100/603 (16%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
            ++ ILD+I  E+P+    G L+      L++ L   P  IA  IV ++    D + V  
Sbjct: 19  TQEAILDKI--EQPKTSKQGDLAF-PTFTLAKTLHKAPQMIASDIVEKVD-GSDFEKVVA 74

Query: 84  AGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            G  ++N +    ++   IL+ ++ +G  +G   +G+  +V I+  S N   P+ +GH R
Sbjct: 75  MGP-YVNFFFKKDAFAADILNQVLSNGGHFGDAKLGEAGQVPIDMSSPNIAKPISMGHLR 133

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY 201
             V+G++LA++++   Y+  +  ++ D G Q   L  +   W  +  +  +  +    YY
Sbjct: 134 STVIGNSLANILSKLDYQPVKINHLGDWGTQFGKLITAYKMWGSEAEVKADPINNLLKYY 193

Query: 202 PGVYLKHVGKELADKYSSE----LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKAL 252
              + + V     D  + E    L N  EE      W    +  S++A  KI +     L
Sbjct: 194 VRFHKEDVDHPEMDDEAREWFKKLENGDEEATHLWSWF---RSESLKAFKKIYQ----RL 246

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +I  D F  E  ++      +++++D L  +  + E       S+  +  D+ +  L   
Sbjct: 247 DIDFDSFKGEAFYN----DKMQEVVDILEDKHLLQE-------SQGAEVVDLSKYDL--- 292

Query: 313 STMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL 367
                     P L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L
Sbjct: 293 ---------NPALIKKSDGATLYITRDLAAAIYRKRTYD--FVQSLYVVGNEQTNHFKQL 341

Query: 368 EAVAAAVSEKKA-QINVLLCELVR------LYRDGMPIKMSKRAGDFITLRH-------- 412
           +AV   +    A QI+ +   L+         R G  I + K   D + L H        
Sbjct: 342 KAVLTEMGFDWADQIHHIPFGLITSGGKKLSTRSGRVILLDKVLDDAVALAHEQIEAKNP 401

Query: 413 -------VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462
                  V D VG  +V F  L  KN  +  FDF     V+ + +  P  YVQYA+AR  
Sbjct: 402 DLPNKDEVADAVGIGAVVFHDL--KNERMNSFDFNLEEVVRFEGETGP--YVQYAHARAE 457

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A            P     +++  D +    +  L+E+P  +  A+   EP  +A
Sbjct: 458 SILRKAGS----------PEIAATEQTLSDPAAWDTLKLLSEFPATVVRASTEYEPSVIA 507

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y   LA  ++ ++++ +       +   + +L   RL LV +V+ ++   L ++GV++P
Sbjct: 508 KYAIHLAKAYNKYYANTK-------ILVEDDELN-ARLALVKSVSIVLKEALRLLGVKAP 559

Query: 583 NEM 585
           +EM
Sbjct: 560 DEM 562


>gi|148998128|ref|ZP_01825641.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168577111|ref|ZP_02722931.1| arginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068691|ref|YP_003877657.1| arginyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147756138|gb|EDK63181.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577269|gb|EDT97797.1| arginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306410228|gb|ADM85655.1| Arginyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 563

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 249/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F   +    S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPEIAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|71854403|gb|AAZ52426.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 529

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/573 (23%), Positives = 248/573 (43%), Gaps = 88/573 (15%)

Query: 50  AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVS 108
           A  L++ L   P  IA  +  +I  +   + V   G  +IN +L  + +  ++L  ++ +
Sbjct: 8   AFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFFLDKAKISSQVLEQVITA 65

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ 
Sbjct: 66  GSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLG 125

Query: 169 DAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           D G Q   L ++   W  + A+  +  D          LK   +  A+  +   ++    
Sbjct: 126 DWGKQFGMLIVAYKKWGDEAAVQAHPID--------ELLKLYVRINAEAETDPTVDEEAR 177

Query: 228 KWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLA 281
           +W   ++D   +A  + +  RD+ L   N  +D      D + G+      + +++D L 
Sbjct: 178 EWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLE 237

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA 339
            +  + E       SK  Q  ++++             ++ P L  KSDG+  Y   DLA
Sbjct: 238 AKNLLVE-------SKGAQVVNLEKY-----------GIEHPALIKKSDGATLYITRDLA 279

Query: 340 ---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAA 373
              Y K  Y+  F   +YV+G++ + + K+L+AV                        A 
Sbjct: 280 AALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWSDDMTHVAFGLVTKGGAK 337

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +S +K  + +LL   V    +    ++  +  +      V   VG  +++F  L      
Sbjct: 338 LSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMN 396

Query: 434 LLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             DFD    V  + +  P  YVQYA+AR +SI R+A           F  +     S  D
Sbjct: 397 GYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD----------FTPSATTTYSLAD 444

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
               ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +++H       R +  N+
Sbjct: 445 AESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAH------TRILDDNS 498

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +    RL L +A A+++   L ++GV++PNEM
Sbjct: 499 ERDN--RLALCYATATVLKEALRLLGVDAPNEM 529


>gi|51596355|ref|YP_070546.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|81639440|sp|Q66AV1|SYR_YERPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51589637|emb|CAH21267.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
          Length = 576

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     +AF
Sbjct: 92  ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  ++  D L  + +  D 
Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E      +  T    D  + +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A   
Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    VI ++ E       L   L ++  +I        P+ +  YLYDLA +
Sbjct: 478 ETSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|261821364|ref|YP_003259470.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605377|gb|ACX87863.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 576

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/612 (23%), Positives = 238/612 (38%), Gaps = 123/612 (20%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I +      G    N  M +++ LG+ P  +AE +V  + ++   +   IAG GFIN++L
Sbjct: 28  IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVG 147
              +        V S +E   N    G        + I++ + N    MHVGH R  ++G
Sbjct: 88  DKQW--------VASQVENALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQAL 189
           D  A  +AF G++V R  ++ D G Q   L                   L  F+R  +  
Sbjct: 140 DAAARTLAFLGHDVIRANHVGDWGTQFGMLIAYLEKMQNESANEMDLSDLEAFYREAKKH 199

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y+ D+D  E    G  +K  G    D+Y  ++       W  +V     Q  +   R  L
Sbjct: 200 YDEDADFAE-RARGYVVKLQG---GDEYCRQM-------WRKLVDITMTQNQINYER--L 246

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                + D+ + E  ++   P     I+ +L  +G   E       S+      +D  + 
Sbjct: 247 NVTLTKQDV-MGESLYNNMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK- 293

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY----- 363
                  G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    +     
Sbjct: 294 ----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAW 349

Query: 364 --VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             V++   V  +VS +     ++L       +DG P K   RAG  I L  ++DE    +
Sbjct: 350 TIVRKAGYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYDRA 401

Query: 422 VRFMMLWRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFY 453
           ++  ++  KN           ++++     K  + SK                  N   Y
Sbjct: 402 LK--LIADKNPQMESDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  SIF++A      +  D   + +       D  E  L   L ++   I +  
Sbjct: 460 MQYAYTRVASIFKRA-----GIQEDTLTQPITLS----DEREFALATRLLQFEETITSVA 510

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YLYDLA +F G + H         + A    +   RL+L    A  +  G
Sbjct: 511 REGTPHVMCSYLYDLAGLFSGFYEH------CPILNAETDDVRQSRLRLALLTAKTLKQG 564

Query: 574 LNIIGVESPNEM 585
           L+ +G+E+  +M
Sbjct: 565 LDTLGIETVEKM 576


>gi|332071346|gb|EGI81840.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 563

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSTISAQVLQTVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|149726104|ref|XP_001503321.1| PREDICTED: arginyl-tRNA synthetase [Equus caballus]
          Length = 658

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 138/584 (23%), Positives = 256/584 (43%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 109 GDYQCNSAMGISQMLKSKEQKVNPREIAENITKHLPGNECIEKVEIAGPGFINVHLRKDF 168

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+
Sbjct: 169 VSEQLTSLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 226

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 227 GYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 285

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I K + +  +  + R +   +    DI + E    RG+      
Sbjct: 286 KRAYQCVVLLQSKNPDITKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDR 339

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + DI+     +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 340 MNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 381

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374
           Y  +DLA  K + +E   D +IYV+ +  S +++ + A A  +                 
Sbjct: 382 YDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHLQTIFAAAQMIGWYDPKVTRVSHAGFGV 441

Query: 375 --SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VR   L  +G+   M K   +  D +     L+     V    +
Sbjct: 442 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLREKERDKVLTAEELKAAQTSVAYGCI 501

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D ++  +
Sbjct: 502 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQK 555

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 556 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 615

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 616 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 658


>gi|332822646|ref|XP_518086.3| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 660

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|149023774|ref|ZP_01836235.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147929570|gb|EDK80563.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 563

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAIKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|257482926|ref|ZP_05636967.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 578

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEVEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|169833567|ref|YP_001695442.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|229558812|sp|B1I9E7|SYR_STRPI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|168996069|gb|ACA36681.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 563

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSTISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|297621921|ref|YP_003710058.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377222|gb|ADI39052.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 243/599 (40%), Gaps = 94/599 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I I + +    GH   N AM L++ L + P  IA+ IV  +     ++ + IAG GFIN+
Sbjct: 27  IDIAQSKQEKFGHYQCNTAMRLTKQLHMPPREIAQRIVESVDKGDAIEKLEIAGPGFINI 86

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LSP+Y+ K + ++  S       L  K  KV +EF S N    +HVGH R  ++GD LA
Sbjct: 87  FLSPAYIEKKVQTMAASP-RLDIALPEKTEKVIVEFSSPNTAKELHVGHLRSTIIGDCLA 145

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVG 210
            +  F G++V R  ++ D G     L   +   + + L    ++DLP             
Sbjct: 146 RVFEFLGHDVLRLNHVGDWGTAFGMLIAYLKLSHPEILTGEEETDLP------------- 192

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             L   Y +    F E+     +    V ++     D LKA  I  +I        R   
Sbjct: 193 -HLVSWYKASKKQFDEDPGFKKISQLEVVSLQGGESDSLKAWEIICEI-------SRRSY 244

Query: 271 SPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLL-----FRSTMVGDDVDR-- 322
             I +++D  +  +G  Y   + P   +     ++D+K+L+      +   + +  +R  
Sbjct: 245 QEIYNLLDVAIEERGESYYNPVLPELIE-----ELDQKELIEISEGAKCIFIPEFCNREG 299

Query: 323 ---PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV---AAA 373
              PL+  KSDG + Y   D+A  K +  E   D +I V  +  + + K + A    A  
Sbjct: 300 SPMPLMVQKSDGGFGYDTTDMAAMKQRVQEEKADRIIIVTDAGQALHFKLVYAASVKAGY 359

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---- 429
           +   K + + +   LV L  DG   K   R+G+   L  ++     D  R +M  R    
Sbjct: 360 LDPDKVRFDHVTFGLV-LGADGK--KFRTRSGEVERLIDLI-YTAIDKAREIMAERNPDM 415

Query: 430 ------KNSELLDFDFCKVKEQS-----------------KENPVFYVQYAYARCRSIFR 466
                 K +  L     K  + S                 + N   ++ YAY R   I R
Sbjct: 416 PQEQREKIARALGIGAIKYADLSCHRTGDYTFSYDRMLRFEGNTAAFLMYAYVRIAGIKR 475

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +        D D     +    S    SE+ L +HLA++   ++       P +L+ YLY
Sbjct: 476 KI-----GADIDALQAAI----SLKHPSEMALGLHLAQFNEALQQVAEDLLPNRLSDYLY 526

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  F+  +         R  Q         RL L  A A I+  GL+++GVE+  +M
Sbjct: 527 TLAEKFNAFY---------RDCQVEGAPEQNSRLLLCEATARILKQGLHLLGVETVEKM 576


>gi|119581911|gb|EAW61507.1| arginyl-tRNA synthetase [Homo sapiens]
          Length = 660

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|71895355|ref|NP_001025778.1| arginyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|82082785|sp|Q5ZM11|SYRC_CHICK RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|53127806|emb|CAG31232.1| hypothetical protein RCJMB04_3h11 [Gallus gallus]
          Length = 661

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 138/597 (23%), Positives = 258/597 (43%), Gaps = 78/597 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAG 85
           +V+   +    G    N+AM +++ L       + P  IAE I   I  +  ++ V IAG
Sbjct: 100 LVVTPSQQPKFGDYQCNSAMGITQILLKTKEQKVSPREIAEKITKHIPANECIEKVEIAG 159

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN++L   ++ K LSS++V+G++     IGK  KV ++F S N    MHVGH R  +
Sbjct: 160 PGFINVHLRKDFVSKQLSSLLVNGVQ--PPAIGKRKKVILDFSSPNIAKEMHVGHLRSTI 217

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPG 203
           +G+++  L  F+GY+V R  ++ D G Q   L   +  R+   L  +    DL + +Y  
Sbjct: 218 IGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDL-QAFYKE 276

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
              +   +E   K + + +   + K    +K + +  +  + R + + +    D+ ++E 
Sbjct: 277 SKRRFDTEEEFKKRAYQCVVLLQSKDPDFIKAWEL--ICDVSRKEFQKIYNCLDVTLTE- 333

Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
              RG+      ++DI+     +G+V              + D D ++++F   + G  V
Sbjct: 334 ---RGESFYQDMMKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGFSV 372

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
              ++KSDG YTY  +DLA  + +   E+G D +IYV+ S  S +++ + A    +    
Sbjct: 373 PLTIMKSDGGYTYDTSDLAALRHRLLEEKG-DILIYVVDSGQSVHLQTVFAAGQMIGWYD 431

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            ++  +      +       K   R+GD + L  +++E                      
Sbjct: 432 PKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRAMDKLKDKERDKVLTPEE 491

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  V    +++  L         F F K+ +  + N   Y+ YA+ R R+I R A 
Sbjct: 492 LKAAQMSVAFGCIKYADLSHNRLNDYVFSFDKMLD-DRGNTAAYLLYAFTRIRAIARLA- 549

Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               ++D  +  +    +    D   E +L   +  +P +++        + L  YLY+L
Sbjct: 550 ----NIDEGMLRKAAREEVIVLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLYEL 605

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ F   + +     + R       K+   RL L  A A+I+  G +I+G++    M
Sbjct: 606 ATTFTEFYDNCYCVEKDR-QSGQIMKVNTWRLLLCEATATIMAKGFDILGIKPVERM 661


>gi|53734470|gb|AAH83505.1| Arginyl-tRNA synthetase [Danio rerio]
          Length = 661

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 252/584 (43%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILS-----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S     + L + P  IAE IV  I  +  ++   IAG GFIN++L  ++
Sbjct: 112 GDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNF 171

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K+LS+++V+G++     + K  KV ++F S N    MHVGH R  ++GD++  L  F 
Sbjct: 172 VSKLLSNVLVNGVQPPP--LQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GYEV R  ++ D G Q   L   +    Q    N  S  P    P   L+   KE   ++
Sbjct: 230 GYEVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLSVSP----PIGDLQAFYKESKKRF 281

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +   F +  +  +VK  S +A      D +KA N+  D  +S  +F +     + + +
Sbjct: 282 DED-EEFKKRAYKCVVKLQSKEA------DFIKAWNLICD--VSRKEFQK-----VYNCL 327

Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           D ++  +G  Y       ++   + K   + D  RK ++F     G  +   ++KSDG Y
Sbjct: 328 DISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRK-IVFAP---GQSIPLTIVKSDGGY 383

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQIN 382
           TY  +DLA  + + ++   D +IYV  S  + + + + A A  +          + A   
Sbjct: 384 TYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFG 443

Query: 383 VLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDS 421
           V+L E              L+ L  +G+   M K   +  D +     L      V    
Sbjct: 444 VVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQQAVAFGC 503

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L         F F K+ +  + N   Y+ YA+ R RSI R A      L      
Sbjct: 504 IKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIQEAALRKAAET 562

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +VI    +    E +L   +  +P +++  T     + L  YLY+LA+ F   +     
Sbjct: 563 TDVILDHEK----EWKLGKCILRFPEILQKITDDLLLHTLCDYLYELATTFTEFYDSCYC 618

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  A A+++  G +I+G+     M
Sbjct: 619 VEKDRQT-GEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM 661


>gi|15149476|ref|NP_002878.2| arginyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178331|sp|P54136|SYRC_HUMAN RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|12653513|gb|AAH00528.1| Arginyl-tRNA synthetase [Homo sapiens]
 gi|15779108|gb|AAH14619.1| Arginyl-tRNA synthetase [Homo sapiens]
 gi|30583627|gb|AAP36058.1| arginyl-tRNA synthetase [Homo sapiens]
 gi|61359156|gb|AAX41676.1| arginyl-tRNA synthetase [synthetic construct]
          Length = 660

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|307244036|ref|ZP_07526155.1| arginine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492560|gb|EFM64594.1| arginine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 153/621 (24%), Positives = 262/621 (42%), Gaps = 92/621 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLD 60
           L ADF    K  + EI  K ++E   L+ I  +IE P +   G  +      L++     
Sbjct: 11  LMADF----KKLISEI-IKSEIEDLTLEEITALIEVPPNKEMGDYAF-PCFKLAKIFRKA 64

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IAE +  +I+   D++ +   G G++N +++   L +K+++ ++     YG++  GK
Sbjct: 65  PNAIAEDLAGKIQPTDDINKIVNLG-GYVNFFVNKESLAKKVINQVLSEKENYGKSEFGK 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +EF S N   P H+GH R  V+G+ L+ +    GY V +  ++ D G Q   L +
Sbjct: 124 GKTVVVEFSSPNIAKPFHIGHVRTTVIGNALSKIYQSQGYHVEKLNHLGDYGTQFGKLIV 183

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYS 237
           +   W  +QA+                 K   KEL   Y    + F +E +  P ++D +
Sbjct: 184 AYKLWGDKQAVE----------------KDPIKELLKLY----IRFHDEAEAKPEMEDEA 223

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +   K+   D +A     D++    D    + S + D++D +    YV E         
Sbjct: 224 REWFTKLENGDQEA----KDLWQWFRDESLKEFSRVYDLLD-IDFDSYVGESFYSDKMPA 278

Query: 298 TTQKCDMDRKQLLFRS--TMVGDDVDRPL-----LKSDGSYTYFAADLA-YFKCKYERGF 349
             +  ++  K LL  S   M+ D  D  L      K DGS  Y   DLA  F  K    F
Sbjct: 279 VIE--ELKEKNLLVESDGAMIVDLEDSKLPPALIQKRDGSTLYLTRDLASAFYRKKIYNF 336

Query: 350 DNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQINVLLC 386
           D  IYV+G+    + K+   +                          +S +K ++ V L 
Sbjct: 337 DKSIYVVGAQQELHFKQCFEIIKRMGYDWYKDMVHVQFGMVALEEGTMSTRKGRV-VFLE 395

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++    D     + ++  D   +  V   VG  +V F  L   NS + D+ F   +  S
Sbjct: 396 DVLNQAIDRTRQIIEEKNPDAENIYEVAKAVGVGAVVFQEL--SNSRIKDYTFSWDRTLS 453

Query: 447 KENPVF-YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            E     YVQY +ARC ++ R+A + I  D++++             D     ++  L  
Sbjct: 454 FEGETGPYVQYTHARCCAVLRKADQPISADINYEALS----------DQDAADVLSVLET 503

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           + + I  A    EP+ +  ++ DLA  F+  + +   +P L      +  L   RL LV 
Sbjct: 504 FNKSIMTAMKKNEPHIVTRFVLDLAQAFNKFYHN---SPIL----VEDDDLRAARLALVE 556

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    I + L I+G+++P +M
Sbjct: 557 ATRQTIENALKILGMKAPQKM 577


>gi|238754848|ref|ZP_04616198.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706859|gb|EEP99226.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 245/588 (41%), Gaps = 92/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +VA + ++     V IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVVALLDLEGISSKVEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              +   +EY       G        V I++ + N    MHVGH R  ++GD  A  + F
Sbjct: 92  ---IAEKVEYALTAPKLGIAPVEPQTVVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEF 148

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELAD 215
            G+ V R  ++ D G Q   L       Y + + N N SD+      G+    V    A 
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLEVFYREAK 197

Query: 216 KYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALN-IQHD---IFISEDDFHR 267
           K+  E   F       +VK    D   +AM + + D   A N I +D   + +++DD   
Sbjct: 198 KHYDEDEAFAARARAYVVKLQGGDEYCRAMWRKLVDITMAQNQISYDRLNVTLTQDDVM- 256

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+    S +  I+ +L  +G   E       S+      +D  +        G+ +   +
Sbjct: 257 GESLYNSMLPGIVADLKAKGLAVE-------SEGATVVFLDEYK-----NKDGEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPL 364

Query: 377 KKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEV 417
           +     ++L +  + +  R G  +++S       +RAG  I           L  VV+ V
Sbjct: 365 EHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAIERAGKLIAEKNPDMPANELAEVVNAV 424

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L +  +    FD+  +      N   Y+QYAY R  S+F++A  +  D   
Sbjct: 425 GIGAVKYADLSKSRTTDYVFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVV--DERS 481

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  VI +E      E  L   L ++   I N      P+ +  YLYD+A +F   + 
Sbjct: 482 LTLPL-VITEE-----REAALATRLLQFEETITNVAREGTPHVMCAYLYDVAGLFSSFYE 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H       + + A++ +    RL+L    A  +  GL+ +G+++   M
Sbjct: 536 H------CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 577


>gi|149006956|ref|ZP_01830637.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147761557|gb|EDK68522.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332071148|gb|EGI81643.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 563

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 251/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +   +          S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 ETSGNY---------SLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|332161947|ref|YP_004298524.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325666177|gb|ADZ42821.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 246/582 (42%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +D     V IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +   + G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+      G+    +  + A K   E 
Sbjct: 155 RANHVGDWGTQFGMLIA-----YLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270
             F +     +VK     +Y  Q   K++   +    I +D   + +++DD   G+    
Sbjct: 204 EEFAKRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVM-GESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + + +I+ +L  +G   E      +  T    D  + +        G+ +   + K DG 
Sbjct: 263 TMLPEIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +K+S       +RAG  I           L+ VV+ VG  +V+
Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +      N   Y+QYAY R  S+F++A     +L   L    
Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVDESNLILPL---- 485

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           VI ++ E       L   L ++  VI        P+ +  YLYDLA +F   + H     
Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + A++ +    RL+L    A  +  GL+ +G+++   M
Sbjct: 536 -CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|188533617|ref|YP_001907414.1| arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691998|sp|B2VJB6|SYR_ERWT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188028659|emb|CAO96521.1| Arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 139/617 (22%), Positives = 236/617 (38%), Gaps = 119/617 (19%)

Query: 32  IVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           I +  P DC            G    N  M +++ +G+ P  +AE ++ ++ +      V
Sbjct: 16  IAVGAPADCEPQVRQSAKAQFGDYQANGMMAVAKKMGMPPRQLAEKVLEQLDLSGIAAKV 75

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GFIN++L+  +L   +   V++  + G   +   T V I++ + N    MHVGH 
Sbjct: 76  EIAGPGFINIFLAQEWLSAQIDG-VLTAPKLGVAPVAPKTVV-IDYSAPNVAKEMHVGHV 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFW 183
           R  ++GD  A  + F G++V R  ++ D G Q   L                   L  F+
Sbjct: 134 RSTIIGDAAARTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQSEHHEAIALADLEAFY 193

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  +  Y+ D    E     V     G E   K   +L++    +   I    +V     
Sbjct: 194 REAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDVTMTQNQLIYDRMNV----T 249

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + RDD+   ++ +D+              +  I+ +L  +G   E       S+      
Sbjct: 250 LTRDDVMGESLYNDM--------------LPGIVADLKAKGLAVE-------SEGATVVF 288

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +D  +        G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    
Sbjct: 289 LDEYK-----NKEGEPMGVIIRKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQ 343

Query: 363 Y-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +       V++   V  ++  +     ++L       +DG P K   RAG  I L  ++D
Sbjct: 344 HLMQAWTIVRKAGYVPDSIPLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVDRATKLVAEKNPDMPADELNALANIVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A          +    V       D  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA---------GIDAEAVSGVTRIVDDREAALAVRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A +      RL+L    A 
Sbjct: 506 ITQVARDGMPHVMCAYLYDLAGLFSGFYEH------CPILNAEDEATKQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKQGLDTLGIETVERM 576


>gi|148984375|ref|ZP_01817663.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|149011935|ref|ZP_01833083.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168484413|ref|ZP_02709365.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|225857652|ref|YP_002739163.1| arginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225859835|ref|YP_002741345.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|237650275|ref|ZP_04524527.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822219|ref|ZP_04598064.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|307128340|ref|YP_003880371.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|254782984|sp|C1CAQ7|SYR_STRP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782988|sp|C1CN25|SYR_STRZP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147763890|gb|EDK70823.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147923152|gb|EDK74266.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|172042367|gb|EDT50413.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|225722109|gb|ACO17963.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225725656|gb|ACO21508.1| arginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|301795009|emb|CBW37473.1| arginyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|301800828|emb|CBW33483.1| arginyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|306485402|gb|ADM92271.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332198683|gb|EGJ12765.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332198891|gb|EGJ12972.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 563

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|153950466|ref|YP_001401016.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|166987306|sp|A7FID8|SYR_YERP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152961961|gb|ABS49422.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     +AF
Sbjct: 92  ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  ++  D L  + +  D 
Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E      +  T    D  + +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWAIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A   
Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    VI ++ E       L   L ++  +I        P+ +  YLYDLA +
Sbjct: 478 ENSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|194398354|ref|YP_002038668.1| arginyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|229558811|sp|B5E387|SYR_STRP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194358021|gb|ACF56469.1| arginyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 563

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 250/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  +    K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATELAE--KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQIA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|22126152|ref|NP_669575.1| arginyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441691|ref|NP_993230.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108807424|ref|YP_651340.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|145598372|ref|YP_001162448.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366025|ref|ZP_01888060.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162421704|ref|YP_001606856.1| arginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926439|ref|ZP_02222271.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938879|ref|ZP_02227433.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009270|ref|ZP_02230168.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210482|ref|ZP_02236517.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401417|ref|ZP_02306914.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420373|ref|ZP_02312126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424725|ref|ZP_02316478.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218929153|ref|YP_002347028.1| arginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229894757|ref|ZP_04509937.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229897461|ref|ZP_04512617.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898107|ref|ZP_04513256.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|270490849|ref|ZP_06207923.1| arginine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503888|ref|YP_003567950.1| arginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|21542252|sp|Q8ZEV7|SYR_YERPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123245827|sp|Q1C827|SYR_YERPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166200588|sp|A4TJL3|SYR_YERPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238687249|sp|A9QYY6|SYR_YERPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21959114|gb|AAM85826.1|AE013829_6 arginine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436553|gb|AAS62107.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108779337|gb|ABG13395.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347764|emb|CAL20681.1| arginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210068|gb|ABP39475.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292438|gb|EDM42512.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162354519|gb|ABX88467.1| arginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913242|gb|EDR31865.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921660|gb|EDR38857.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991825|gb|EDR44126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207662|gb|EDR52142.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962068|gb|EDR58089.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049113|gb|EDR60521.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056607|gb|EDR66376.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229688823|gb|EEO80890.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693798|gb|EEO83847.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229702230|gb|EEO90249.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361993|gb|ACY58714.1| arginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365870|gb|ACY62427.1| arginyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270339353|gb|EFA50130.1| arginine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354347|gb|ADE64688.1| arginyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     +AF
Sbjct: 92  ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  ++  D L  + +  D 
Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E      +  T    D  + +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A   
Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    V+ ++ E       L   L ++  +I        P+ +  YLYDLA +
Sbjct: 478 ETSLTLPL----VVTEDRE-----ATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|318605975|emb|CBY27473.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 251/584 (42%), Gaps = 85/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +D     V IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +   + G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+      G+    +  + A K   E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270
             F +     +VK     +Y  Q   K++   +    I +D   + +++DD   G+    
Sbjct: 204 EEFAKRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVM-GESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + + +I+ +L  +G   E      +  T    D  + +        G+ +   + K DG 
Sbjct: 263 TMLPEIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +K+S       +RAG  I           L+ VV+ VG  +V+
Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +      N   Y+QYAY R  S+F++A     +L   L    
Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVDESNLILPL---- 485

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFHGHWSHGRE 541
           VI ++ E       L   L ++  VI   T+A+E  P+ +  YLYDLA +F   + H   
Sbjct: 486 VITEDRE-----AALATRLLQFEEVI--TTVAREGIPHVMCSYLYDLAGLFSSFYEH--- 535

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + + A++ +    RL+L    A  +  GL+ +G+++   M
Sbjct: 536 ---CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|290508794|ref|ZP_06548165.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289778188|gb|EFD86185.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 138/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +++ + ++   + V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  V   ++  R  + K     + +++ + N    MHVGH R  ++GD     + F G++
Sbjct: 93  ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N S++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENASEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK      Y +Q   K++           DI +S++   + R + +  
Sbjct: 203 DEAFAERARSYVVKLQGGDQYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D 
Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 478

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +  +    VI ++      E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 479 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A + +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|15903931|ref|NP_359481.1| arginyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516539|ref|YP_817294.1| arginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148989896|ref|ZP_01821179.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148992079|ref|ZP_01821853.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168486894|ref|ZP_02711402.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168489140|ref|ZP_02713339.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168491605|ref|ZP_02715748.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168494168|ref|ZP_02718311.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221232790|ref|YP_002511944.1| arginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855567|ref|YP_002737079.1| arginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|38372520|sp|Q8DN69|SYR_STRR6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122277860|sp|Q04I94|SYR_STRP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782985|sp|B8ZPK2|SYR_STRPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782987|sp|C1CH08|SYR_STRZJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15459583|gb|AAL00692.1| Arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS)
           [Streptococcus pneumoniae R6]
 gi|116077115|gb|ABJ54835.1| arginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147924681|gb|EDK75766.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147929128|gb|EDK80139.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183570152|gb|EDT90680.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183572255|gb|EDT92783.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183574045|gb|EDT94573.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183575862|gb|EDT96390.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220675252|emb|CAR69843.1| arginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723848|gb|ACO19701.1| arginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|332071512|gb|EGI82005.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332198499|gb|EGJ12582.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 563

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|182685015|ref|YP_001836762.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303254068|ref|ZP_07340184.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259580|ref|ZP_07345556.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262025|ref|ZP_07347970.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264481|ref|ZP_07350400.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267396|ref|ZP_07353252.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269755|ref|ZP_07355506.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|229558813|sp|B2IMZ8|SYR_STRPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|182630349|gb|ACB91297.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802752|emb|CBW35524.1| arginyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598978|gb|EFL66008.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636665|gb|EFL67155.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639132|gb|EFL69591.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640702|gb|EFL71098.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643061|gb|EFL73352.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645851|gb|EFL76079.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 563

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 251/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   + E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +   +          S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 469 ETSGNY---------SLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|18977752|ref|NP_579109.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|23822193|sp|Q8U149|SYR_PYRFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18893491|gb|AAL81504.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 629

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 44/342 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLS-PSYLRK 100
           G   T  A  L+R L   PL IA+ I  +  K  P      IA  G++N +L  P   + 
Sbjct: 39  GDFGTPVAFQLARLLRKSPLIIAQEIAEKFNKNKPKEVKKAIAVNGYVNFFLDYPQISKL 98

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           ++ +I+  G EYGR+ IGKG KV +E  S NPT P+H+GH R A++GDT+A ++ F GY+
Sbjct: 99  VIEAILGYGTEYGRSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGDTVARILRFLGYQ 158

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----------GYYPGVYLKHV 209
           V  + YI+D G Q       V+W Y       D  + E            +  G+    V
Sbjct: 159 VEVQNYIDDLGVQF----AQVYWGYLNLKRKFDELMKELKEKIPKNNPIDHVLGLLYVEV 214

Query: 210 GKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            K++      +K   EL+   EE+ L   K    + ++K   + L +LNI +D+ + E D
Sbjct: 215 NKKIEESSEVEKEIRELMKKLEERELNGRK--LAEEVVKAQMETLYSLNIYYDLLVWESD 272

Query: 265 F--HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
               R     I+ +  N        E    P + K      MD  +L         D+  
Sbjct: 273 IVSTRLFEKTIKLLEKN--------ENFYTPKEGKYKGAFVMDLSKLF-------PDMKN 317

Query: 323 PLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
           P L   +SDG+ TY   D+AY   K+ +   +++Y    +H+
Sbjct: 318 PYLVLRRSDGTATYTGKDIAYHLWKFGKIDIDLMYKKWDEHT 359



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 76/133 (57%), Gaps = 9/133 (6%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYA+ARC SI R+A+++    D+    +  +   ++    E +LI+ L+ +P +++ A
Sbjct: 506 YIQYAHARCSSILRKAEELGISTDWKSLLK--VANFNQITEKERELIMLLSRFPEIVQQA 563

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P+ +A+Y  ++AS F+  +    ++P ++  +     +   RL LV A   ++ +
Sbjct: 564 GTDLKPHLIAWYANEVASTFNKFYM---DHPVIKAEEG----VREARLLLVMATRQVLRN 616

Query: 573 GLNIIGVESPNEM 585
            L ++G+E+P++M
Sbjct: 617 SLWLMGIEAPDKM 629


>gi|41053407|ref|NP_956342.1| arginyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|28277820|gb|AAH45884.1| Arginyl-tRNA synthetase [Danio rerio]
          Length = 661

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 251/591 (42%), Gaps = 89/591 (15%)

Query: 43  GHLSTNAAMILS-----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S     + L + P  IAE IV  I  +  ++   IAG GFIN++L  ++
Sbjct: 112 GDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNF 171

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K+LS+++V+G++     + K  KV ++F S N    MHVGH R  ++GD++  L  F 
Sbjct: 172 VSKLLSNVLVNGVQPPP--LQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GYEV R  ++ D G Q   L   +    Q    N  S  P    P   L+   KE   ++
Sbjct: 230 GYEVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLSVSP----PIGDLQAFYKESKKRF 281

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +   F +  +  +VK  S +A      D +KA N+  D  +S  +F +     + + +
Sbjct: 282 DED-EEFKKRAYKCVVKLQSKEA------DFIKAWNLICD--VSRKEFQK-----VYNCL 327

Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           D ++  +G  Y       ++   + K   + D  RK ++F     G  +   ++KSDG Y
Sbjct: 328 DISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRK-IVFAP---GQSIPLTIVKSDGGY 383

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TY  +DLA  + + ++   D +IYV  S  + + + + A A  +     ++        R
Sbjct: 384 TYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQLIGWYDPKV-------TR 436

Query: 391 LYRDGMPI-------KMSKRAGDFITLRHVVDE--------------------------- 416
           +   G  +       K   R+GD + L  +++E                           
Sbjct: 437 VEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQ 496

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A      
Sbjct: 497 RAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIQEAA 555

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L       +VI    +    E +L   +  +P +++  T     + L  YLY+LA+ F  
Sbjct: 556 LRKAAETTDVILDHEK----EWKLGKCILRFPEILQKITDDLLLHTLCDYLYELATTFTE 611

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       + R       K+ M R+ L  A A+++  G +I+G+     M
Sbjct: 612 FYDSCYCVEKDRQT-GEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM 661


>gi|325849255|ref|ZP_08170691.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480199|gb|EGC83267.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 568

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 138/590 (23%), Positives = 248/590 (42%), Gaps = 85/590 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFINL 91
           +IE P     G  S     IL++ L  +P  IA EL     K D    S   +   ++N 
Sbjct: 27  LIEIPPQDDMGDFSF-PCFILAKKLRKNPAIIAKELKEDLEKEDSPYFSKVDSLNAYLNF 85

Query: 92  YLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           Y+   YL+ ++L  I+     YGR+ +GKG  + ++F S N   P H+GH R  V+GD +
Sbjct: 86  YIDRKYLQGQVLREIIKEKENYGRSDMGKGKNIVLDFSSVNIAKPFHIGHIRSTVIGDAI 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
            ++  F GY      YI D G Q   + A    W     L  N    P      +Y+++ 
Sbjct: 146 RNIHDFLGYNTIASNYIGDYGTQFGIMIAAYKLWGDDDKLNQN----PIKELLNLYVRYN 201

Query: 210 GKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFH 266
            +  +D+   +++N   +++  L   ++ +V+          K  +  + +  I+ D++H
Sbjct: 202 EQASSDQ---DMMNEARDEFRRLEEGEEEAVRLWSWFKEISFKEFDRVYKLLDINFDNYH 258

Query: 267 RG--DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
                   I D++D L  +  + E       S   Q  D+ +              D P 
Sbjct: 259 GEAYQSKYIPDVLDQLKEKNLLTE-------SDGAQIIDLSK-------------YDLPP 298

Query: 324 --LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--------- 371
             ++KS+GS  Y   D+A     K    F   +YV+ +  + + ++L A+          
Sbjct: 299 AIIIKSNGSSAYITRDIATAINRKKTYDFSENLYVVATQQNLHFQQLWAILELMGYDFYK 358

Query: 372 --------------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                           +S +K Q+ V L +++    D     M  R      L      V
Sbjct: 359 DCKHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIDKTKEIMKDRDSALENLDETAQIV 417

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK-DIFPDL 475
           G  +V+F  L+    +   FD+  +   + +  P  YVQY+YAR +S+ ++ + D F  +
Sbjct: 418 GIGAVKFQELYNNRIKDYVFDWDNLLNFEGETGP--YVQYSYARAKSVLKKGQIDNFDKV 475

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +FDL   +           E  LI  LAE+   I  A    EP  ++  + D+A  F+  
Sbjct: 476 EFDLLNTD----------EEFNLIKSLAEFKESIVRAKEKYEPSIISRKVMDIAKNFNKF 525

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +       +  ++ KL   RL L +A + +I +GL ++G+++ ++M
Sbjct: 526 YNTSK-------IMVDDEKLKEQRLALAYATSIVIKNGLKLLGIKTVDQM 568


>gi|90077474|dbj|BAE88417.1| unnamed protein product [Macaca fascicularis]
          Length = 660

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 255/594 (42%), Gaps = 95/594 (15%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+V R  ++ D G Q   L   +  ++   L  +    P G     Y     KE   ++
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSP---PIGDLQAFY-----KESKKRF 280

Query: 218 SSELLNFPEEKWLPIV----KDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDP-- 270
            +E   F +  +  +V    K+  +    K+I D   +  N  +D  +      RG+   
Sbjct: 281 DTE-EEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRREFNKIYDA-LDVSLIERGESFY 338

Query: 271 -SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + DI+     +G+V              + D D ++++F   + G  +   ++KSDG
Sbjct: 339 QDRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDG 380

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            YTY  +DLA  K +  E   D +IYV+ S  S + + + A A  +     ++       
Sbjct: 381 GYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKV------- 433

Query: 389 VRLYRDGMPI-------KMSKRAGDFITLRHVVDE------------------------- 416
            R++  G  +       K   RAG+ + L  ++ E                         
Sbjct: 434 TRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKERDKVLTAEELNA 493

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               +  D +++  L         F F K+ +  + N   Y+ YA+ R RSI R A    
Sbjct: 494 AQTSIAYDCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA---- 548

Query: 473 PDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+LA+ 
Sbjct: 549 -NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATT 607

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 608 FTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|182892034|gb|AAI65718.1| Rars protein [Danio rerio]
          Length = 661

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 251/591 (42%), Gaps = 89/591 (15%)

Query: 43  GHLSTNAAMILS-----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S     + L + P  IAE IV  I  +  ++   IAG GFIN++L  ++
Sbjct: 112 GDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNF 171

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K+LS+++V+G++     + K  KV ++F S N    MHVGH R  ++GD++  L  F 
Sbjct: 172 VSKLLSNVLVNGVQPPP--LQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GYEV R  ++ D G Q   L   +    Q    N  S  P    P   L+   KE   ++
Sbjct: 230 GYEVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLSVSP----PIGDLQAFYKESKKRF 281

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +   F +  +  +VK  S +A      D +KA N+  D  +S  +F +     + + +
Sbjct: 282 DED-EEFKKRAYKCVVKLQSREA------DFIKAWNLICD--VSRKEFQK-----VYNCL 327

Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           D ++  +G  Y       ++   + K   + D  RK ++F     G  +   ++KSDG Y
Sbjct: 328 DISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRK-IVFAP---GQSIPLTIVKSDGGY 383

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TY  +DLA  + + ++   D +IYV  S  + + + + A A  +     ++        R
Sbjct: 384 TYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQLIGWYDPKV-------TR 436

Query: 391 LYRDGMPI-------KMSKRAGDFITLRHVVDE--------------------------- 416
           +   G  +       K   R+GD + L  +++E                           
Sbjct: 437 VEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQ 496

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A      
Sbjct: 497 RAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIQEAA 555

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L       +VI    +    E +L   +  +P +++  T     + L  YLY+LA+ F  
Sbjct: 556 LRKAAETTDVILDHEK----EWKLGKCILRFPEILQKITDDLLLHTLCDYLYELATTFTE 611

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       + R       K+ M R+ L  A A+++  G +I+G+     M
Sbjct: 612 FYDSCYCVEKDRQT-GEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM 661


>gi|225861897|ref|YP_002743406.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230662|ref|ZP_06964343.1| arginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254470|ref|ZP_06978056.1| arginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501578|ref|YP_003723518.1| arginine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254782989|sp|C1CTY4|SYR_STRZT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225727935|gb|ACO23786.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237173|gb|ADI68304.1| arginine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388815|gb|EGE87163.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 563

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|171186028|ref|YP_001794947.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935240|gb|ACB40501.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 635

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 236/551 (42%), Gaps = 123/551 (22%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E  SANP  P+H+GH R A++GD+LA L+ F G  V   +Y++D G Q+   A+     
Sbjct: 118 VEHTSANPIHPLHIGHGRNAILGDSLARLLRFCGNSVETHFYVDDCGVQVMYAAIG---- 173

Query: 185 YQQALYNNDSDL---------PEGYYPGVY--------LKHVGKELA----DKYSSELLN 223
                YN   DL         P+     +Y        +  + +ELA    ++   E+++
Sbjct: 174 -----YNAVRDLAGERIRRVKPDVVVGAIYSATNAVAEIGRLKRELAAVQDEERRREIIS 228

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPSP---IRDI 276
             +E W+ ++K   + A   I+    ++L    D+     + +R    GDP     +R++
Sbjct: 229 EIDE-WVGVLKRI-MDAEGDIVNRLAESLG-GRDLVAEAAELNRRYEAGDPEARRAVREV 285

Query: 277 ID--------NLARQGY------------VYEG----ILPPPKSKTTQKCDMDRKQLLFR 312
           +D         L+R G             V+ G    I+   + +  Q  +     ++FR
Sbjct: 286 VDLVLKGQRETLSRLGIEIDRWDYESEISVWSGEAARIVAELQRRWPQYVESRGGAVVFR 345

Query: 313 STMVGDD------VDRP-------LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +    +D      +D P       L +SDG+  Y   D+AY   +  + FD +I V+ ++
Sbjct: 346 ADKFVEDFKLWDVLDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQTRQEFDRVIRVISTE 405

Query: 360 --HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             H     R+   A    E+  ++     E+V L       KMS R G +I L  ++DE 
Sbjct: 406 QTHEQAHVRIILYALGFQEEAKRLMHYAYEMVNL----PGAKMSARRGQYIALDEILDEA 461

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  SVR+  L     + ++F +  V    ++N   ++
Sbjct: 462 AERSAALVKEKNPEVAGVIAERVGVGSVRYAFLSTGPRKPIEFKWETVLNM-RQNSGSFL 520

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY Y R  SI  +A     +L   + P  ++P+E E       LI+ +AE+P V++ A  
Sbjct: 521 QYTYVRAYSILEKATG--ANLAGVVIPGEILPEERE-------LILKVAEWPGVVKTAVH 571

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           A  P  +A +L  LA VF+ ++      P L+        L   RL LV+AV +++ +G 
Sbjct: 572 ALRPDYVAEFLDGLALVFNSYYEKA---PVLK----AEEPLRSFRLALVNAVKNVLAAGF 624

Query: 575 NIIGVESPNEM 585
            I+G+ +  +M
Sbjct: 625 YILGIPTLTKM 635


>gi|322832419|ref|YP_004212446.1| arginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167620|gb|ADW73319.1| arginyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 577

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 248/584 (42%), Gaps = 84/584 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +    + V IAG GFIN++L P+++   +
Sbjct: 37  GDYQANGVMSVAKKLGMPPRQLAEKVVELLDLSGIANKVEIAGPGFINIFLDPAFVAAHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            S  ++  + G   +   T V I++ + N    MHVGH R  ++GD       F G++V 
Sbjct: 97  DS-ALNDEKLGITPVEPQTIV-IDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L ++   + Q   A   N +DL E Y             A K   E
Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQNENAGDMNLADLEEFY-----------RAAKKNYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP-- 270
              F E     +VK     +Y +Q   K++   +K   + ++   + ++EDD   G+   
Sbjct: 203 DEAFAERARGYVVKLQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVM-GESLY 261

Query: 271 -SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            S +  I+ +L  +G   +       S+      +D  +        GD +   + K DG
Sbjct: 262 NSMLPGIVSDLQAKGLAVD-------SEGAVVVYLDEYK-----NKEGDPMGVIIRKKDG 309

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA-------AVSEKKAQI 381
            Y Y   D+A  K +YE  G D ++Y + S    ++ +   +A        +V+ +    
Sbjct: 310 GYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIARKAGYVPDSVALEHHMF 369

Query: 382 NVLLCELVRLY--RDGMPIKMSK-------RAGDFIT-----------LRHVVDEVGSDS 421
            ++L +  + +  R G  +K+S        RA   IT           L  +V+ VG  +
Sbjct: 370 GMMLGKDGKPFKTRSGGTVKLSDLLDEAIDRARKLITEKNPEMKDTGELEKLVNAVGIGA 429

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L +  +    FD+  +    + N   Y+QYAY R  SIF++A     D+D +   
Sbjct: 430 IKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----DIDVNSLT 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           + V+  E      E  L   L ++  V+        P+ +  YLYD+A +F   + H   
Sbjct: 484 QPVVLSEER----EAALATRLLQFEEVLTVVAREGTPHTMCAYLYDVAGLFSSFYEH--- 536

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A +      RL+L       + +GL+ +G+E+   M
Sbjct: 537 ---CPILNAEDETSRNSRLKLALLTQRTLKTGLDTLGIETVERM 577


>gi|212633367|ref|YP_002309892.1| arginyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226701384|sp|B8CI29|SYR_SHEPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212554851|gb|ACJ27305.1| Arginyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 581

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 235/602 (39%), Gaps = 96/602 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG  +TN AM+L++    +P  IA+LI+  +     V+ V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDFATNLAMMLTKAARKNPREIAQLIIDNLPQSSHVEKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L   + S    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDNALANQLMDALNSD-HLGVTLPESQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190
              + F G+ V R+ ++ D G                    AQI    L  F+R  +  +
Sbjct: 147 VRSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR---- 246
           +   D        V     G E  +K   E  +        I +   V    + +R    
Sbjct: 207 DESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESS 266

Query: 247 --DDLKALNIQHD-------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             DDL+ +    D             +F  E     G+P P+   I   A  GY+Y    
Sbjct: 267 YNDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPV---IIQKADGGYLY---- 319

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------GSYTYFAADLAYFKCKY 345
                        D   + +RS ++    DR L   D          +  A  A F  + 
Sbjct: 320 ----------ATSDMAAMRYRSNVL--KADRALYFVDLRQALHFQQVFKLAKTAKF-VRE 366

Query: 346 ERGFDNMIY--VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           E  F++M +  + G D   +  R   V   +   K + +    ELVR     M       
Sbjct: 367 EMSFEHMGFGTMNGEDGRPFKTRSGGVVKLIDLLK-EADTRALELVRSKNPDM------- 418

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
             D   L  +   VG  SV++  L +  +    F F ++    + N   Y+ YAY R   
Sbjct: 419 --DEAELAEIARVVGIASVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAG 475

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IF++A+D+  DL      + V+  E E D     L   LA++  V+       +P+ L  
Sbjct: 476 IFKRAQDV--DLS---DAKIVLEHEKEKD-----LGTKLAQFGEVMNRVVNKGQPHALCA 525

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++LA  F   +           + A+       RL L    A  +  GLN++G+E+  
Sbjct: 526 YLFELAGAFSSFYE------ACPVLAADTEAQKKSRLLLAQLTAKTLKQGLNLLGLETLE 579

Query: 584 EM 585
            M
Sbjct: 580 RM 581


>gi|146319780|ref|YP_001199492.1| arginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321977|ref|YP_001201688.1| arginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752763|ref|YP_003025904.1| arginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754588|ref|YP_003027729.1| arginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756521|ref|YP_003029661.1| arginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166232848|sp|A4W4J9|SYR_STRS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232849|sp|A4VYA3|SYR_STRSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145690586|gb|ABP91092.1| Arginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692783|gb|ABP93288.1| Arginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251817052|emb|CAZ52704.1| arginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818985|emb|CAZ56832.1| arginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820834|emb|CAR47600.1| arginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292559386|gb|ADE32387.1| Arginyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319759181|gb|ADV71123.1| arginyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 562

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 149/604 (24%), Positives = 255/604 (42%), Gaps = 118/604 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  IV   K+D       +A   ++N +
Sbjct: 26  LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAADIVE--KLDTTGFENVVATGPYVNFF 82

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L+ ++    +YG+  IG+G  V I+  S N   P  VGH R  V+GD LA
Sbjct: 83  LDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY+  R  ++ D G Q   L ++   W  + A+  +    P      +Y++ + 
Sbjct: 143 NIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGDKAAVEAD----PISELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E  +K     L+    +W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 198 AEAEEKPE---LDDEARQWFKKLEDGDPEAHELWQWFRDESLVEFNRIYDKLDVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK  +  D++   L             P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGAKIVDLESYNL-------------PP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             ++K+DG+  Y   D+A   Y K  Y+  F   IYV+G +   + K+L+AV   +    
Sbjct: 295 ALIMKTDGATLYITRDMATAMYRKRTYD--FVKSIYVVGQEQINHFKQLKAVLKEMDFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    I   L       +D    K+S R G+ I L   +DE                  
Sbjct: 353 SDDMTHITFGLVT-----KDKK--KLSTRKGNIILLEPTLDEAISRALTQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +SI R+A
Sbjct: 406 KEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQ-ESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                         N +P  E+++   DT   ++I H+  +  V+E A    +P  +A Y
Sbjct: 464 --------------NFVPNAENDYKLADTESWEIIKHIQNFSAVVERAGDKFDPSLIAKY 509

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             +LA  F+ +++H R   E+P               RL L +A   ++   L ++GV++
Sbjct: 510 AINLAQAFNKYYAHTRILDESPERD-----------SRLALAYATGLVLKEALRLLGVKA 558

Query: 582 PNEM 585
           P +M
Sbjct: 559 PEKM 562


>gi|310778226|ref|YP_003966559.1| arginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747549|gb|ADO82211.1| arginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 570

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 132/591 (22%), Positives = 255/591 (43%), Gaps = 85/591 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I IE   +   G   TN AM+ ++ L  +P  IAE +V  +  +  ++ + +AG GFIN+
Sbjct: 28  IDIEAASNEKFGDFQTNFAMVNAKVLRSNPRAIAENVVNNLVDNNVIEKIEVAGPGFINI 87

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L   YL   +  I  S  +Y  + +     V I++ S N    MH+GH R  ++GD++ 
Sbjct: 88  FLKEEYLGDRVRKI--STEKYDLSFLDTHGDVIIDYSSPNIAKRMHIGHLRSTIIGDSIK 145

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209
            +  + GY+V  + +I D G Q   L +    W  ++A   N   +L   Y         
Sbjct: 146 RIYRYLGYKVVADNHIGDWGTQFGKLIIGYRNWLDREAYKANPIEELERVYVEFSKNSEE 205

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSV-QAMMKIIRDDLKA----LNIQHDIFISEDD 264
             EL D+   EL    E       ++YS+ Q  +K+  D+       L +  D +  E  
Sbjct: 206 NTELEDQAREELRKLHEGD----EENYSLWQEFIKVSLDEYNKVYGRLGVDFDTYYGESF 261

Query: 265 FHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +H   P+ + +++D N+A++      +    K K    C + +K                
Sbjct: 262 YHDMMPAVVEELLDKNIAKEDDGANVVFFEEKDK-LHPCIVQKK---------------- 304

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
               DG++ Y  +D+A  K + E    + +IYV       + ++   +   +  +  + +
Sbjct: 305 ----DGAFLYATSDIATVKFRKENYDVNQIIYVTDERQQDHFRQFFKITDMLGWEVKKNH 360

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V     +  + +G+    S R G+ I L H++DE    ++   ++  KN  L   +   +
Sbjct: 361 VWFG--IMRFAEGI---FSSRKGNVIRLEHLLDEGKKKALE--VVEEKNPTLSAEEKANI 413

Query: 443 KE-------------QSKENPVF---------------YVQYAYARCRSIFRQAKDIFPD 474
            E             Q++++PV                Y+QY+YAR +SI R+  +    
Sbjct: 414 SEVVGIGAIKYADLSQNRQSPVIFEWDKILSFEGNTAPYLQYSYARIQSILRKGAENSKV 473

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L  D     +I +ES    +E  L+++++ +P+++  A  +  P  +  YL++L+  F+ 
Sbjct: 474 LKED---SKIILEES----AERSLVLYMSLFPKMVMKAAESFRPNLVTDYLFELSRRFNT 526

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++     P L        ++   RL +    A ++  GL+++G+ + + M
Sbjct: 527 FYNSC---PILN----QEDEILYSRLLIADRTAKVLKEGLDLLGIGTVDRM 570


>gi|219849478|ref|YP_002463911.1| arginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782951|sp|B8G4J9|SYR_CHLAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219543737|gb|ACL25475.1| arginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 574

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 153/618 (24%), Positives = 258/618 (41%), Gaps = 91/618 (14%)

Query: 11  LKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           L+ ++ +I   I    K+ +D I I  P+        T      ++ LG+DP  +A  + 
Sbjct: 5   LERFITDIKDAIAATGKVPVDLIEITTPKPNIPAD-RTFVTFKAAKVLGVDPAKLAAELA 63

Query: 70  ARIKIDPD--VDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126
           A I   PD  +  V   G  F+N  L P  L   +L+ I  +G  YG    G G  V I+
Sbjct: 64  ATIAPPPDSLIGEVTATG-AFLNFSLHPQRLAAAVLNEIETAGEAYGTVADGAGRTVVID 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R  ++G  L  +    GY V  + ++ D G Q   + L+   RY 
Sbjct: 123 YSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGII-LAAMQRYG 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +     ++ + E            + L  +Y++E+      K  P ++D + +  + + R
Sbjct: 182 RPQNEGEAAMAE-----------LEALYARYNAEM------KDDPALEDEARRWSLALER 224

Query: 247 DDLKALNI-QHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            D +A ++ Q  + +S     R  D   IR    + A     YE +LP    +       
Sbjct: 225 GDPEARSLWQWCVDLSLRAAQRNYDRLGIR---FDYAYGESFYEAMLPGVIEEAL----- 276

Query: 305 DRKQLLFRST--MVGDDVDR----PLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
            R +  FR     V  ++D+     + +SDG   Y   D+A  K +  E    ++IYV+ 
Sbjct: 277 -RSEAAFRDVDGAVVAELDKLPKFIIQRSDGGTVYMTRDIATIKFRLQEFSPSHIIYVVD 335

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +    + ++L A+  A+   +    V +   V    DG P  +S + G+ + L  ++D+ 
Sbjct: 336 ARQELHFRQLFAIVRAMGYARDVELVHVPFGVITTPDGQP--LSTKKGNMVYLEALLDDA 393

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V +  L++     +  D+ ++    + N 
Sbjct: 394 VARARALVDAKSADLPLEERAAIAEAVGIGAVIYNDLYQDPRRNITLDWDRML-SIEGNS 452

Query: 451 VFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
             Y+QY++ARCRSI R+A D      + D  L              SE +LI HLA  P 
Sbjct: 453 AAYLQYSHARCRSILRRAADEGVALAEADLTLLTH----------PSEQRLIRHLARLPE 502

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A     P+ +A + Y  A  F   +    + P LR   A    L   RLQLV A A
Sbjct: 503 AVREAGARYAPFVIADWCYTTAREFGIFFE---QCPVLR---AETPALRAARLQLVAATA 556

Query: 568 SIINSGLNIIGVESPNEM 585
           + + +GL ++G+++P  M
Sbjct: 557 NALRNGLALLGIQAPERM 574


>gi|262041990|ref|ZP_06015172.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259040688|gb|EEW41777.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 577

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +++ + ++   + V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  V   ++  R  + K     + +++ + N    MHVGH R  ++GD     + F G++
Sbjct: 93  ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENSGEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK     +Y +Q   K++           DI +S++   + R + +  
Sbjct: 203 DEAFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D 
Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 478

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +  +    VI ++      E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 479 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A + +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|206576111|ref|YP_002237735.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288934593|ref|YP_003438652.1| arginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238065091|sp|B5XPZ2|SYR_KLEP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|206565169|gb|ACI06945.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288889302|gb|ADC57620.1| arginyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 577

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 138/590 (23%), Positives = 242/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +++ + ++   + V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  V   ++  R  + K     + +++ + N    MHVGH R  ++GD     + F G++
Sbjct: 93  ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK      Y +Q   K++           DI +S++   + R + +  
Sbjct: 203 DEAFAERARSYVVKLQGGDQYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A       
Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA------- 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             D    N  P     D  E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 475 GIDENAMNDAPVVIAED-REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A + +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|94676629|ref|YP_588726.1| arginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081491|sp|Q1LTI8|SYR_BAUCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94219779|gb|ABF13938.1| arginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 578

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 134/587 (22%), Positives = 247/587 (42%), Gaps = 89/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG+    +A+ +V+ ++++     + IAG GFIN+YL   +L   +
Sbjct: 37  GDYQINGLMATAKQLGVPSYFLAKKVVSFLQLNGIARQIDIAGPGFINIYLDSQWLATKI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++ + S    G +LI     + +++ S N    MHVGH R  ++GD  A ++ F G++V 
Sbjct: 97  ATAIASP-RLGISLIELPQTIVVDYSSPNIAKEMHVGHIRSTIIGDASARILDFIGHKVI 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  +I D G     L   +    QQ   N D ++P  +   +Y     ++  DKY ++  
Sbjct: 156 RINHIGDWGTHFGMLIAYL----QQVEKNIDPEIPLSFLDQLY-----RQAKDKYDTDP- 205

Query: 223 NFPEEKWLPIVK-----DYSVQAMMKIIRDDLKA---------LNIQHDIFISEDDFHRG 268
           +F +E    +VK      + ++   K+++  +           +++ H+  + E  ++  
Sbjct: 206 SFAQEARNCVVKLQCGDSFCLKIWQKLVKITINENQKIYNRLNISLSHENIMGESKYNNM 265

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            P    +II +L  +G   E       +      +   KQ        G+ +   + K D
Sbjct: 266 LP----NIIADLKAKGLAVES----AGATVIFLNEFQDKQ--------GNPLGVIIQKKD 309

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLL 385
           G+Y Y   D+A  K +YE+   D +IY + S    ++K++  +   A    +  Q++  +
Sbjct: 310 GAYLYTTTDIACIKYRYEQLKADRIIYYVDSRQHQHLKQIWTIVRKAGYIPQTMQLDHHM 369

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------SELL 435
             ++   ++G P K   R G  I L  ++DE      R ++L +            ++++
Sbjct: 370 FGMI-FDKEGKPFKT--RVGVNIKLNDLLDE-ALKRARCLILSKNMDVDPVELEHLAQVI 425

Query: 436 DFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
                K  E SK                  N   Y+ YAY R  SI +++     + +  
Sbjct: 426 SISAIKYAELSKNRTTDYIFNWDDMLSFEGNTAPYILYAYTRIASILKRS-----NYNKQ 480

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 I  E E    E  L V L +Y   I        P+ L  YLY+LA  F   + H
Sbjct: 481 QILTGSILLEKE---HEHLLAVRLLQYHETITTVAHDGRPHILCGYLYNLAVRFSSFYEH 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + AN+      RLQL    +  +  GL+++G+E+ ++M
Sbjct: 538 ------CSIINANSDIQRKSRLQLALLTSKTLQHGLSLLGIETVDKM 578


>gi|15901895|ref|NP_346499.1| arginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657149|ref|ZP_01407930.1| hypothetical protein SpneT_02001629 [Streptococcus pneumoniae
           TIGR4]
 gi|18279281|sp|Q54869|SYR_STRPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14973589|gb|AAK76139.1| arginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 563

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     K++       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  DT   ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|108811686|ref|YP_647453.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229901967|ref|ZP_04517088.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|122980195|sp|Q1CJH7|SYR_YERPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|108775334|gb|ABG17853.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229680863|gb|EEO76958.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|320015277|gb|ADV98848.1| arginyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 576

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     +AF
Sbjct: 92  ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  ++  D L  + +  D 
Sbjct: 207 SLRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E      +  T    D  + +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A   
Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    V+ ++ E       L   L ++  +I        P+ +  YLYDLA +
Sbjct: 478 ETSLTLPL----VVTEDRE-----ATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|71735913|ref|YP_272687.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|109895018|sp|Q48PI2|SYR_PSE14 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71556466|gb|AAZ35677.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 578

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPSDEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|322392636|ref|ZP_08066096.1| arginine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144628|gb|EFX40029.1| arginine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 563

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLETPKNSDMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINGQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L +++     Y    IG    V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKAAISGQVLQNVITEKEHYADQKIGNQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  +++ L  +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVEILENKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +     
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWN 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           Q +++      + RDG   K+S R G+ I L   V E                       
Sbjct: 355 Q-DIVHVPFGLVTRDGK--KLSTRKGNVILLEPTVAEAISRAKAQIEAKNPELENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A D  P
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +   +          S  D    ++I  + ++PR+I+ A    EP  +A +   LA  F+
Sbjct: 469 EAGANY---------SLNDDESWEIIKLIQDFPRIIKRAADNYEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   ++P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDKSPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|238751578|ref|ZP_04613068.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710140|gb|EEQ02368.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 576

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 243/582 (41%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +D    +V IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIASNVEIAGPGFINIFLDRQWVASKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               ++  + G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  EQ-ALTAPKLGVAPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+      G+    +  + A K   E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270
             F +     +VK     +Y  Q   K++   +    I +D   + ++ DD   G+    
Sbjct: 204 EEFAQRARAYVVKLQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVM-GESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  I+ +L  +G   E      +  T    D  + +        G+ +   + K DG 
Sbjct: 263 SMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + +    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +K+S       +RAG  I           L+ VV+ VG  +V+
Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +      N   Y+QYAY R  S+F++A      L   L    
Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDENSLTLPL---- 485

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           VI ++ E       L   L ++  VI        P+ +  YLYDLA +F   + H     
Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A N +    RL+L    A  +  GL+ +G+++   M
Sbjct: 536 -CPILNAENEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|157149704|ref|YP_001451306.1| arginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074498|gb|ABV09181.1| arginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 562

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 150/606 (24%), Positives = 251/606 (41%), Gaps = 122/606 (20%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  IV +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIVEKIDT-THFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + +  +++  +V  G +YG+   GKG  V I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LNKAEISGQVIKEVVKEGADYGQQNEGKGENVTIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D               
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187

Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            EL   Y   ++E+ N P        W   ++D   +A  + +  RD+ L   N  +++ 
Sbjct: 188 -ELLQLYVRINAEIENDPALDDEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELL 246

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             E D   G+      + + I  L  +G + E       SK     ++D           
Sbjct: 247 GVEFDSLNGEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD----------- 288

Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
             DV+ P   + KSDG+  Y   D+A    +     F   IYV+G + S + ++L+AV  
Sbjct: 289 --DVNLPPAMIKKSDGATLYITRDIATAMYRARTYNFVKSIYVVGQEQSNHFRQLKAVLK 346

Query: 373 AV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            +    S+    ++  L    R        K+S R G+ I L   + E            
Sbjct: 347 KMGFDWSDDMTHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKSQIEDK 399

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462
                        VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +
Sbjct: 400 NPELENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQ 457

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A D  PD + D +  N        D    ++I  L ++ RV++ A    EP  +A
Sbjct: 458 SILRKA-DFTPDANAD-YRLN--------DAESWEIIKLLQDFSRVVKRAADNYEPSLIA 507

Query: 523 FYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y   LA  F+ +++H R   E+P               RL L ++ A ++   L ++GV
Sbjct: 508 KYAISLAQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGV 556

Query: 580 ESPNEM 585
           ++P +M
Sbjct: 557 DAPEKM 562


>gi|312866812|ref|ZP_07727025.1| arginine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097595|gb|EFQ55826.1| arginine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 562

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 250/602 (41%), Gaps = 114/602 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KID       +A   ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDQSAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  +++ S++ +G +YG+   GKG  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSKISDQVIKSVIEAGADYGQQDEGKGQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N    P      +Y+    
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEAN----PIDELLKLYV---- 194

Query: 211 KELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISE 262
                + ++E+ N PE      KW   ++D   +A  + +  RD+ L   N  + +   E
Sbjct: 195 -----RINAEIENDPELDEEGRKWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLLGVE 249

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            D   G+ +   D +D    Q    +G+L   K  +  +                DDV+ 
Sbjct: 250 FDSLNGE-AFYNDKMDE-GVQILEDKGLLKESKGASIVEL---------------DDVNL 292

Query: 323 P---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-- 374
           P   + KSDG+  Y   D+A   Y    Y   F   IY +G + S + ++L+AV   +  
Sbjct: 293 PPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKKMGF 350

Query: 375 --SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
             S+    ++  L    R        K+S R G+ I L   + E                
Sbjct: 351 DWSDDMVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKNPDL 403

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFR 466
                    VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +SI R
Sbjct: 404 ENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILR 461

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A           F  +     S  D    ++I  L ++ RV++ A    +P  +A Y  
Sbjct: 462 KAN----------FTPSTDATYSLSDPESWEIIKLLQDFSRVVKRAAENYDPSLIAKYAI 511

Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +LA  F+ +++H R   E+P               RL L ++ A ++   L ++GV++P 
Sbjct: 512 NLAQAFNKYYAHTRILDESPERE-----------SRLALSYSTAVVLKEALRLLGVDAPE 560

Query: 584 EM 585
           +M
Sbjct: 561 KM 562


>gi|330001087|ref|ZP_08303897.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328537789|gb|EGF63987.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 561

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +++ + ++   + V IAG GFIN++L P++    L
Sbjct: 21  GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 76

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  V   ++  R  + K     + +++ + N    MHVGH R  ++GD     + F G++
Sbjct: 77  ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 136

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 137 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 186

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK     +Y +Q   K++           DI +S++   + R + +  
Sbjct: 187 DEAFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 235

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 236 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 294

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     
Sbjct: 295 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 354

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 355 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 406

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D 
Sbjct: 407 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 462

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +  +    VI ++      E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 463 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 517

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A + +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 518 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 561


>gi|168705003|ref|ZP_02737280.1| arginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 580

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 231/558 (41%), Gaps = 99/558 (17%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101
           +G    N AM L + LG  P  +A+ +VA +  +  ++   +AG GFINL L P +L + 
Sbjct: 40  NGDYQANCAMALGKQLGQKPPEVAKALVAALPANDLLEPPTVAGPGFINLRLKPEFLARA 99

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L  I     + G +   K     I+    N   P+HVGH R  ++GD L  ++ F G+ V
Sbjct: 100 LQEIATD-PKLGVSPAAKSKTFVIDLSGPNVAKPLHVGHLRSTIIGDALVRILRFLGHTV 158

Query: 162 TREYYINDAGAQINT----------------------LALSVFWRYQQALYNNDSDLPEG 199
             + ++ D G Q                         L L +F R Q AL   + +  EG
Sbjct: 159 IGDNHLGDWGTQFGILLYGYKNHRDDAAFAADPVRELLRLYIFVRKQAALAEGEDE--EG 216

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                 +     E +  ++    N PE   + + K + + A M+++R   + L+++ D  
Sbjct: 217 GADNPVMAACRAETSKLHA----NDPEN--VALWKSF-MPACMEMLRPIYERLDVKIDHA 269

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTM 315
           + E  ++      +  ++ ++  +G   E     ++P  K    Q  +  +K+       
Sbjct: 270 LGESFYN----PMLAGVVADMLAKGIAVESKGAIVIPNAKGIVPQTPEEQKKE------- 318

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
                + P +  K DG++TY   DLA  K + E    D M+YV+G+  + + K + A A 
Sbjct: 319 -----EPPAIIRKRDGAFTYTTTDLATIKYRAETWKPDAMLYVVGAPQALHFKTVFAQAK 373

Query: 373 -----AVSEKKAQINVLL--------------CELVRLYRDGMPIKMSKRAGDFITLR-- 411
                 +  +  Q   +L               EL+ L  +   + + K   +    R  
Sbjct: 374 RWGVDGIEFQHVQFGSMLGADRKIFGTRKGGALELMELLNEAAALSLQKYEANTAERRSF 433

Query: 412 -------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                         + + VG  +V++  L +  +    FD  K+   +  N   Y+QYAY
Sbjct: 434 GHKIYEAEASEKQEIAEVVGVGAVKYADLSQNRTTDYVFDLDKMT-ATVGNTAAYMQYAY 492

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           ARCRSIFR+       +D  +F R   P  +    +E  L +HL   P  +E A     P
Sbjct: 493 ARCRSIFREG-----GVDEGVF-RTAPPAVTLPHAAERALALHLLRLPEAVEAAAADYAP 546

Query: 519 YKLAFYLYDLA---SVFH 533
           + +  YL+DLA   SVF+
Sbjct: 547 HLITAYLWDLAKATSVFY 564


>gi|261858632|dbj|BAI45838.1| arginyl-tRNA synthetase [synthetic construct]
          Length = 660

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L VF++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSVAYGYIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|91794705|ref|YP_564356.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060581|sp|Q12IU3|SYR_SHEDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91716707|gb|ABE56633.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 581

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 249/607 (41%), Gaps = 106/607 (17%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D  HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKTHGDLATNLAMMLTKVAGKNPRELAQLIIDNLPPSSHVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L    ++   +G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDNALATQLEQ-ALNDEHFGITLPEPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQALY 190
              + F G++V R+ ++ D G Q   L                     L  F+R  +  +
Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKLRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           +  +D        V    V  +  D+Y ++L     +  L    D   +  + + R D+ 
Sbjct: 207 DESTDFATRARQLV----VALQSGDEYCNKLWQEFNDISLSHCHDVYERLGVSLTRADVH 262

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                      E  ++    + +  ++ +L  +G + E                +  +++
Sbjct: 263 G----------ESAYN----ADLEQVVKDLDAKGLLSES---------------NGAKVV 293

Query: 311 FRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKR 366
           F+    T  G+ +   + K+DG Y Y  +DLA  + + +    D  +Y +    + + ++
Sbjct: 294 FQEAFRTKEGEPLPVIIQKADGGYLYATSDLAAMRYRSKVLKADRALYFVDLRQALHFQQ 353

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE--------- 416
           + ++A      +  + +       +   DG P K   R+G  + L  ++DE         
Sbjct: 354 VFSLAKLAKFVRKDMQLEHNGFGTMNGEDGRPFKT--RSGGVVKLVDLLDEANNRALELV 411

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             VG  SV++  L +  +    F F ++    + N   Y+ YAY
Sbjct: 412 RSKNPDMDEATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAY 470

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R   IF++A+DI      DL    ++ +  +    E +L   LA++   +   T   +P
Sbjct: 471 TRVAGIFKRAEDI------DLTDAKIVLEHDK----EKELATKLAQFGETLYKMTDKAQP 520

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  YLY+LA  F   +           + A+       RL L    A+ +N GL+++G
Sbjct: 521 NMLCNYLYELAGAFSSFYE------ACPVLAADTPAQQGSRLLLAKLTANTLNKGLSLLG 574

Query: 579 VESPNEM 585
           +E+   M
Sbjct: 575 IETLERM 581


>gi|163750994|ref|ZP_02158226.1| arginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329284|gb|EDQ00282.1| arginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 581

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 133/604 (22%), Positives = 251/604 (41%), Gaps = 100/604 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D  HG  +TN AM+L++    +P  IA+LI+  +  D  V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKTHGDFATNLAMMLTKIARKNPREIAQLIIDSLPQDSQVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++    L   L +  +     G  L  + T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDEDALANQLMA-ALKDDHLGICLPEQQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190
              + F G++V R+ ++ D G                    AQ++   L  F+R  +  +
Sbjct: 147 VRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMDLADLETFYRAAKVRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           +   D        V    V  +  D+Y ++L     +  L    D   +  + + R+D++
Sbjct: 207 DESEDFAVRARKLV----VSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVR 262

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                      E  ++    + + +++  L  QG + E       +K   + +   K+  
Sbjct: 263 G----------ESAYN----ADLAEVVKELKAQGLLSE----SNGAKVVFQDEFKNKE-- 302

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEA 369
                 GD +   + K+DG Y Y  +D+A  + + +    D ++Y +    + + +++  
Sbjct: 303 ------GDPLPVIIQKADGGYLYATSDMAAMRYRSKVLNADRVLYFVDLRQALHFQQVFK 356

Query: 370 VAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------ 416
           +A   +  + ++++       +   DG P K   R+G  + L  +++E            
Sbjct: 357 LARKANFVRPELSLEHMGFGTMNGADGRPFKT--RSGGVVKLVDLLNEADTRALELVRSK 414

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          VG  SV++  L +  +    F F ++    + N   Y+ YAY R 
Sbjct: 415 NPDMDEAELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRV 473

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             IF++AKDI      DL    ++ +  +    E  L   LA++  V+       +P+ +
Sbjct: 474 TGIFKRAKDI------DLSDAKIVLEHDK----EKNLGNKLAQFAEVLSRMVAKGQPHAM 523

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL++LA  F   +      P L    A        RL +    A  +  GL+++G+E+
Sbjct: 524 CAYLFELAGAFSSFYE---ACPVL---AAETEAQKKSRLLIAQLTAKTLKQGLDLLGIET 577

Query: 582 PNEM 585
            + M
Sbjct: 578 LDRM 581


>gi|289624155|ref|ZP_06457109.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647384|ref|ZP_06478727.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330865708|gb|EGH00417.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 578

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 248/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  R+  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARNKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTSFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|152970935|ref|YP_001336044.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895450|ref|YP_002920185.1| arginyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|166232797|sp|A6TB43|SYR_KLEP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150955784|gb|ABR77814.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547767|dbj|BAH64118.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 577

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +++ + ++   + V IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +  V   ++  R  + K     + +++ + N    MHVGH R  ++GD     + F G++
Sbjct: 93  ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK     +Y +Q   K++           DI +S++   + R + +  
Sbjct: 203 DEAFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D 
Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 478

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +  +    VI ++      E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 479 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A + +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577


>gi|323466019|gb|ADX69706.1| Arginyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 568

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 253/599 (42%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  S+   G  ++N  
Sbjct: 32  LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 88

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG    G+G  + I+  S N   PM +GH R  V+G+++A
Sbjct: 89  IDHEKLVSSTLKDVLSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 148 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 199

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256
               ++  E  N PE      +W   ++D   +A  + K  R    +D     K L +  
Sbjct: 200 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 255

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 256 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 294

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V     
Sbjct: 295 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 353

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 354 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIEEKNPDLADKDQ 412

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A 
Sbjct: 413 VAHDVGVGAVIFHDL--KNDRLDNFDFALDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 468

Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +              P E +F   D     +   LA++PR+I  +    EP  +A +  
Sbjct: 469 AM-----------GEKPSEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 517

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 518 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 568


>gi|307707761|ref|ZP_07644240.1| arginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616259|gb|EFN95453.1| arginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 563

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 140/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++  A  +         +  AEL     KI+       +A   ++N +
Sbjct: 26  LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L +++     Y    IGK   V I+  S N   P  +GH R  V+GD+L+
Sbjct: 83  LDKNAISAQVLQAVITEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  ++A+  +  D          LK   
Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+    +W   ++  D    A+ +  RD+ L   N  ++    E D + 
Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L+ +G + E       S+  Q  ++++             ++ P 
Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLKEMGYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
             ++       + ++G   K+S R G+ I L   V E                       
Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPGLENKDQVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A     
Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 F        S  D    ++I  + ++PR+I  A    EP  +A +   LA  F+
Sbjct: 466 ------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563


>gi|327260697|ref|XP_003215170.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 663

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 251/605 (41%), Gaps = 116/605 (19%)

Query: 43  GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM +++ L       + P  IA+ I   I  +  ++ V IAG GFIN++L   
Sbjct: 113 GDYQCNSAMSITQMLLKTKEQKISPREIADKIARNIPDNECIEKVEIAGPGFINVHLKKD 172

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           ++ + LSS++V+G++     IG+  +V ++F S N    MHVGH R  ++GD++  L  F
Sbjct: 173 FVSRQLSSLLVNGVQ--PPAIGERKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEF 230

Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLP 197
            GY+V R  ++ D G Q   L                    L  F++  +  ++ + +  
Sbjct: 231 VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFK 290

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           +  Y  V L      L  K + E +     K   ++ D S Q   KI       L+I   
Sbjct: 291 KRAYQCVVL------LQSK-NPEFI-----KAWKLICDVSRQEFQKI----YDCLDIS-- 332

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
             +   + +  D  P  DI+  L  +G V              + D D ++++F   + G
Sbjct: 333 -LVERGESYYQDMMP--DIVKELEEKGVV--------------QLD-DGRKIVF---VPG 371

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
             +   ++KSDG +TY  +DLA  K +  E   D++IYV+ S  S +++ + A A  V  
Sbjct: 372 CSIPLTIVKSDGGFTYDTSDLAAIKQRLLEEKADSIIYVVDSGQSVHLQTIFAAAQMVGW 431

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
              Q+  ++     +       K   R+GD + L  +++E                    
Sbjct: 432 YDPQVTRVVHAPFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTP 491

Query: 417 ----VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                   SV F  +        R N  +  FD  K+ +  + N   Y+ YA+ R RSI 
Sbjct: 492 EELKAAQTSVAFGCIKYSDLSHNRINDYIFSFD--KMLD-DRGNTAAYLLYAFTRIRSIA 548

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R A      +D           E   D   E +L   +  +P +I+        + L  Y
Sbjct: 549 RLA-----SIDEKTLQTAARTTEIILDHEKEWKLGRCILRFPEIIQKILDDLLLHTLCDY 603

Query: 525 LYDLASVFHGHWSHG----RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LY+LA+ F   +       ++    + V+ N     M R+ L  A A+++  G +I+G++
Sbjct: 604 LYELATTFTEFYDSCYCVEKDRQTGKIVKVN-----MWRMLLCEATAAVMAKGFDILGIK 658

Query: 581 SPNEM 585
              +M
Sbjct: 659 PVQKM 663


>gi|330938645|gb|EGH42211.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 578

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 247/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++  G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKSAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D ++Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|186895396|ref|YP_001872508.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|238691368|sp|B2K312|SYR_YERPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|186698422|gb|ACC89051.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 576

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     +AF
Sbjct: 92  ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  ++  D L  + +  D 
Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E      +  T    D  + +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A   
Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    VI ++ E       L   L ++  +I        P+ +  YLYD+A +
Sbjct: 478 ETSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDVAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|322390459|ref|ZP_08063979.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142858|gb|EFX38316.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 562

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 249/605 (41%), Gaps = 120/605 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KID       +A   ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDQSAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  +++ S++ +G +YG+   G G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSKISDQVIKSVIEAGADYGQQDEGNGQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D               
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187

Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            EL   Y   ++E+ N PE      KW   ++D   +A  + +  RD+ L   N  + + 
Sbjct: 188 -ELLKLYVRINAEIENDPELDEEGRKWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLL 246

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E D   G+ +   D +D  A Q    +G+L   K  +  +                DD
Sbjct: 247 GVEFDSLNGE-AFYNDKMDE-AVQILEDKGLLKESKGASIVEL---------------DD 289

Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           V+ P   + KSDG+  Y   D+A   Y    Y   F   IY +G + S + ++L+AV   
Sbjct: 290 VNLPPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKK 347

Query: 374 V----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           +    S+    ++  L    R        K+S R G+ I L   + E             
Sbjct: 348 MGFDWSDDMVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKN 400

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRS 463
                       VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +S
Sbjct: 401 PELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQS 458

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A           F  +     S  D    ++I  L ++ RV++ A    +P  +A 
Sbjct: 459 ILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFSRVVKRAAENYDPSLIAK 508

Query: 524 YLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           Y  +LA  F+ +++H R   E+P               RL L ++ A ++   L ++GV+
Sbjct: 509 YAINLAQAFNKYYAHTRILDESPERE-----------SRLALSYSTAVVLKEALRLLGVD 557

Query: 581 SPNEM 585
           +P +M
Sbjct: 558 APEKM 562


>gi|586063|sp|P37880|SYRC_CRIGR RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|478315|pir||JN0870 arginine-tRNA ligase (EC 6.1.1.19) - Chinese hamster
 gi|433544|emb|CAA45012.1| arginine--tRNA ligase [Cricetulus longicaudatus]
          Length = 661

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 151/631 (23%), Positives = 277/631 (43%), Gaps = 96/631 (15%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG----- 58
           + +SRL++      C IK     LD   +V+   +    G    N+AM +S+ L      
Sbjct: 76  NINSRLQDVF---GCAIKAAYPDLDNPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 132

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           ++P  IAE I   +  +  +D V IAG GFIN++L   ++ + L++++V+GI+     +G
Sbjct: 133 VNPRGIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGIQLP--ALG 190

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L 
Sbjct: 191 ENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLI 250

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
             +  ++   L  +    P G     Y     KE   ++ +E   F +  +  +V   S+
Sbjct: 251 AHLQDQFPDYLTVSP---PIGDLQAFY-----KESKKRFDTE-EEFKKRAYQCVV---SL 298

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDD----------FHRGDP---SPIRDIIDNLARQGY 285
           Q+      D +KA N+  D+  +E +            RG+      ++DI+     +GY
Sbjct: 299 QSKDP---DFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGY 355

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344
           V              + D D ++++F   + G  +   ++KSDG +TY  +DLA  K + 
Sbjct: 356 V--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRL 397

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQIN-----VLLCE--------- 387
           +E   + +IYV+ +  + + + + A A  +     K  Q+      V+L E         
Sbjct: 398 FEEKANKIIYVVDNGQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRS 457

Query: 388 -----LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELL 435
                LV L  +G+   M K   +  D +     L      +    +++  L        
Sbjct: 458 GETVRLVDLLGEGLKRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDY 517

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TS 494
            F F K+ +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   
Sbjct: 518 IFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NVDEEMLQKAARETKIVLDHEK 571

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E +L   +  +P +++        + L  Y+Y+LA+ F   +       + R       K
Sbjct: 572 EWKLGRCILRFPEILQKMLDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQT-GKVLK 630

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + M R+ L  AVA+++  G +I+G++    M
Sbjct: 631 VNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 661


>gi|256843725|ref|ZP_05549213.1| arginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256615145|gb|EEU20346.1| arginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 561

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 253/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D D  ++   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-DFANIQAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG   IG+G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261
               + + EL N   E W   ++D   +A+          +K  +   K L +  D +  
Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F+      ++ +ID L  +G ++E       S+  Q  DM   +             
Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289

Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370
            P  ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V        
Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349

Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                             +S +K  + V L ++++        ++ ++  D      V  
Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408

Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A  + 
Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464

Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +           P E++    D     +   LA++PR++  +    EP  +A +  DLA
Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 514 KKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561


>gi|294788151|ref|ZP_06753394.1| arginine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483582|gb|EFG31266.1| arginine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 567

 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 245/596 (41%), Gaps = 105/596 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++ P+D  HG    N  M  ++ +G +P  +A+ I   +          +AG GF+NL
Sbjct: 25  IVLQSPKDAKHGDFQINGVMGAAKKVGQNPRELAQKIADELNGKGAFAGAEVAGLGFVNL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            LSP +L + LS  +        N+    T   + I++ S N    MHVGH R +++GD+
Sbjct: 85  RLSPEFLAQQLSGSL--------NIEKTATPNTIVIDYSSPNLAKEMHVGHLRSSIIGDS 136

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLK 207
           ++ ++ F G++V R+ ++ D G Q   L   V +  +Q   N +  L   E +Y    ++
Sbjct: 137 ISRVLEFLGHKVIRQNHVGDWGTQFGML---VAYLVEQQKDNAEFKLADLEQFYRNAKIR 193

Query: 208 H----VGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
                   +LA +Y  +L +  E       +++ I   ++ +   K+       L +Q  
Sbjct: 194 FDEDAAFADLAREYVVKLQSGDEAVLALWRQFVEISLQHAEEVYAKL------GLKLQRA 247

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV- 316
               E  ++    + + ++I+ L  +G                  D D  +++F      
Sbjct: 248 DVAGESSYN----ADLHNVINELEAKGLA---------------VDSDGAKVVFLDEFKN 288

Query: 317 --GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
             G+     + K  G + Y   D A  + +  + G   ++YV+ +    + K+L   +  
Sbjct: 289 KEGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGGTRLLYVVDTRQDLHFKQLFTASRK 348

Query: 374 VSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                  ++         + +DG P K   R+GD + L  ++DE    + +  ++  KN 
Sbjct: 349 AGWLPENVSAEFIGFGTMMSKDGKPFKT--RSGDTVKLVDLLDEAVERATK--LVRDKNP 404

Query: 433 ELLDFDFCKVKEQ-----------SKE-----------------NPVFYVQYAYARCRSI 464
           +L D D  K+ E            SK                  N   Y+QYAY R +S+
Sbjct: 405 KLSDLDAVKIGETVGIGAVKYADLSKNRTSDYVFDWDNMLSFEGNTAPYLQYAYTRVQSV 464

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F++  D            NV          E QL V L ++  V+++      P+ LA Y
Sbjct: 465 FKKVGDW-----------NVQAALKLEQPLEQQLAVELLKFEDVLQSVAETSFPHYLANY 513

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LY LA++F   +      P L+  + + R     RL+L       +  GL+++G++
Sbjct: 514 LYQLATLFSRFY---EACPILK-AEGDVRD---SRLKLAQLTGETLKMGLDLLGID 562


>gi|312868747|ref|ZP_07728939.1| arginine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095733|gb|EFQ53985.1| arginine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 562

 Score =  114 bits (284), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 261/608 (42%), Gaps = 114/608 (18%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I+D+I  ERP+D  +G  +      L++ L   P  IA  +V +I      + V +AG
Sbjct: 21  EEIVDKI--ERPKDANNGDYAF-PTFFLAKTLHKAPQMIAADLVEKID-QAGFEKVVVAG 76

Query: 86  KGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             +IN +L  + +  +I+ +I+     YG+  +G G  V I++ S N   PM +GH R  
Sbjct: 77  P-YINFFLDKAQVGAEIIKAILADPAGYGKKDLGHGANVTIDYSSPNIAKPMGMGHLRST 135

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPG 203
           ++G+ +A ++A   Y   R  Y+ D G Q   L A    W  ++ +  +  +    YY  
Sbjct: 136 MIGEAIARILAKENYTPVRIDYLGDWGTQFGKLMAAYKMWGSEEEVKKDPINTLLKYYVR 195

Query: 204 VYLK--------HVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALN 253
           +  +          G+E    + ++L +  +E W      +  S++   K+       L+
Sbjct: 196 INTEAEEHPEYTDAGRE----WFAKLEHGDKEAWRLWHWFRQISIERFQKV----YDMLD 247

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +  D F  E    +    PI+ + D    +            S+  Q  D+D  +L    
Sbjct: 248 VHFDSFNGEAFSAQKMDDPIQLLKDKHLLKA-----------SRGAQIVDLDAYKLT--- 293

Query: 314 TMVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                    PL +KS+G+ TY   DLA   Y K  +  G    +YV+G++   Y K+L+A
Sbjct: 294 --------PPLIIKSNGTTTYITRDLATALYRKRMF--GHAKSLYVVGAEQENYYKQLKA 343

Query: 370 VAAAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------- 415
           V   +     ++   I+  L  L     +G   KMS R G+ + L  V++          
Sbjct: 344 VLKEMGFTWWDQLEHISFGLMNL-----NGQ--KMSTRKGNVVNLEDVLNDSIKLARQQI 396

Query: 416 ---------------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYA 459
                          +VG  +V F  L       ++F     VK + +  P  YVQYA A
Sbjct: 397 AEKNPDLPNADEVAKQVGVGAVIFHDLKNDRRNAVNFKLEDVVKFEGETGP--YVQYARA 454

Query: 460 RCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           R  SI R+   +D F ++D            +    +   ++  L +Y  V+E A +  +
Sbjct: 455 RAESILRKGGIRD-FSNVDL-----------TTVGDAAWDILSFLGQYSDVVERAAVNYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +L+  F+ +++H       R +Q +  +    RL LV AV+ ++   L ++
Sbjct: 503 PSVIAKYALELSKKFNQYYAHN------RILQDDEGQPA--RLALVQAVSHVLKDALAML 554

Query: 578 GVESPNEM 585
            +++P+EM
Sbjct: 555 DIKAPDEM 562


>gi|238792571|ref|ZP_04636204.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728206|gb|EEQ19727.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 576

 Score =  114 bits (284), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 246/582 (42%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN++L   ++ + +
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLSGIASKVEIAGPGFINIFLDRQWVAEKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               ++  + G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  EH-ALTAPKLGVAPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+      G+    +  + A K   E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203

Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270
             F +     +VK     +Y  Q   K++   +    I +D   + +++DD   G+    
Sbjct: 204 EEFAQRARAYVVKLQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM-GESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +  I+ +L  +G   E      +  T    D  + +        G+ +   + K DG 
Sbjct: 263 AMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE  G D ++Y + +    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370

Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423
           ++L +  + +  R G  +K++       +RAG  I           L+ VVD VG  +V+
Sbjct: 371 MMLGKDGKPFKTRSGGTVKLADLLDEAIERAGKLIAEKNPDMPADELKQVVDAVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +      N   Y+QYAY R  S+F++A     +L   L    
Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDESNLTLPL---- 485

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           VI ++ E       L   L ++  VI        P+ +  YLYDLA +F   + H     
Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 536 -CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|262283658|ref|ZP_06061423.1| arginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260715|gb|EEY79416.1| arginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 562

 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 150/606 (24%), Positives = 251/606 (41%), Gaps = 122/606 (20%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  IV +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIVEKIDT-THFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + +  +++  +V  G +YG+   GKG  V I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LNKAEISGQVIKEVVKEGADYGQQNEGKGENVTIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D               
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187

Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            EL   Y   ++E+ N P        W   ++D   +A  + +  RD+ L   N  +++ 
Sbjct: 188 -ELLQLYVRINAEIENDPALDDEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELL 246

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             E D   G+      + + I  L  +G + E       SK     ++D           
Sbjct: 247 GVEFDSLNGEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD----------- 288

Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
             DV+ P   + KSDG+  Y   D+A    +     F   IYV+G + S + ++L+AV  
Sbjct: 289 --DVNLPPAMIKKSDGATLYITRDIATAMYRARTYNFVKSIYVVGQEQSNHFRQLKAVLK 346

Query: 373 AV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            +    S+    ++  L    R        K+S R G+ I L   + E            
Sbjct: 347 KMGFDWSDDMTHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKSQIEDK 399

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462
                        VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +
Sbjct: 400 NPELENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQ 457

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A D  PD + D +  N        D    ++I  L ++ RV++ A    EP  +A
Sbjct: 458 SILRKA-DFTPDANAD-YRLN--------DAESWEIIKLLQDFGRVVKRAADNYEPSLIA 507

Query: 523 FYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y   LA  F+ +++H R   E+P               RL L ++ A ++   L ++GV
Sbjct: 508 KYAISLAQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGV 556

Query: 580 ESPNEM 585
           ++P +M
Sbjct: 557 DAPEKM 562


>gi|327440673|dbj|BAK17038.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 559

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 259/595 (43%), Gaps = 103/595 (17%)

Query: 33  VIERPRDCAHGHLSTNA--AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ERP+   + HL   A     L++ L   P  IA  I   IK D  +  V + G G+IN
Sbjct: 26  LLERPK---YQHLGDIAFPCFTLAKSLKKAPNVIAIEIGDNIKSDF-IQEVHVVG-GYIN 80

Query: 91  LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L+L+     R +++ I+++   YG+  I +   V I+F S N   P  +GH R  V+G+ 
Sbjct: 81  LFLNKLQVTRDVMAKIMIAHESYGQQEIQQKNIV-IDFSSPNIAKPFSMGHLRSTVIGNA 139

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA++   +GY V R  ++ D G Q   L L  F  + +      S + E       LK  
Sbjct: 140 LANIAEKNGYNVIRVNHLGDWGTQFGKL-LVAFQLWGEKERVQQSPIEE------LLKLY 192

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K   +  +++ LN         ++D   QAM   +    K+ ++Q              
Sbjct: 193 VKFHDEAETNKSLNEEARSAFKALEDNDPQAMA--LWTWFKSASLQE------------- 237

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--TMVGDDVDRP---L 324
               + I + L  Q   YEG     +   +   ++ +KQLL  S    V +  D P   +
Sbjct: 238 ---FKQIYEQLHIQFDTYEGEAFYNEKMQSVVDELKKKQLLTESDGANVVELEDMPPCLI 294

Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            K DG+  Y   DLA   Y + +YE     + YV+G++ + + K++  V + +    +  
Sbjct: 295 TKQDGATLYATRDLAAAFYRQAQYEPS--QVFYVVGNEQTLHFKQVFQVISKMGYPWSG- 351

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------------HVVDE 416
           N+       + +DG   KMS R G  I L+                         +V D+
Sbjct: 352 NLKHVPFGMMLKDGK--KMSTRKGRVILLKDVLKEAVETASRNIEEKNPTLNNKQNVADQ 409

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L D +F     +  + +  P  YVQY +AR  SI  +AK    
Sbjct: 410 VGIGAVIFNDL--KNFRLNDIEFSLPQMLNFEGETGP--YVQYTHARIHSILEKAK---- 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                 +  +      E + S  ++I  L +YP+VI ++    +P  +A Y+  LA +F+
Sbjct: 462 ------YTASNEVTVMELENSAWEVIKLLQQYPQVITDSFEQVDPSLIAKYVLQLARIFN 515

Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++++ +   E+ +L             RLQL  AVA+++  GL ++G++SP  M
Sbjct: 516 KYYANTKILVEDEQLE-----------SRLQLCFAVATVLKDGLKLLGIKSPESM 559


>gi|90077298|dbj|BAE88329.1| unnamed protein product [Macaca fascicularis]
          Length = 588

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 256/607 (42%), Gaps = 121/607 (19%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 39  GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 98

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 99  VSEQLTSLLVNGVQL--PAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 156

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L  F++  +  ++ + +  +
Sbjct: 157 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 216

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q   KI      AL++   +
Sbjct: 217 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--L 258

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 259 IERGESFYQ---DRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGC 297

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            +   ++KSDG YTY  +DLA  K +  E   D +IYV+ S  S + + + A A  +   
Sbjct: 298 SIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWY 357

Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416
             ++        R++  G  +       K   RAG+ + L  ++ E              
Sbjct: 358 DPKVT-------RVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 410

Query: 417 ----------VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                     V   S+ +  +        R N  +  FD  K+ +  + N   Y+ YA+ 
Sbjct: 411 DKVLTAEELNVAQTSIAYGCIKYADLSHNRLNDYIFSFD--KMLD-DRGNTAAYLLYAFT 467

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518
           R RSI R A     ++D ++  +     +   D   E +L   +  +P +++        
Sbjct: 468 RIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 522

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G
Sbjct: 523 HTLCDYIYELATTFTEFYDSCYCVEKDR-QTGKILKVNMWRMLLCEAVAAVMAKGFDILG 581

Query: 579 VESPNEM 585
           ++    M
Sbjct: 582 IKPVQRM 588


>gi|332637432|ref|ZP_08416295.1| arginyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 561

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 270/604 (44%), Gaps = 105/604 (17%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E  IL +I  E P+D   G  +     +L++   + P  IA  +   I    D  +V  A
Sbjct: 20  EATILSKI--EVPKDSTMGDFAF-PTFLLAKERHMAPNQIAATVAEAIDA-TDFKAVQAA 75

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G  ++N +L+       +   V+   ++G N  G+   V I+  S N   PM +GH R  
Sbjct: 76  GP-YVNFFLNQLTFGTDVLQTVLMNQDFGHNTDGEAGHVTIDMSSPNIAKPMSMGHLRST 134

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYP 202
           V+G++LA +   +GY+  +  ++ D G Q   L +S +  W  +  +  +  +    YY 
Sbjct: 135 VIGNSLAEISKANGYQPIKINHLGDWGTQFGKL-ISAYKRWGSEDEVKADPINTLVKYY- 192

Query: 203 GVYLKHVGKE---LADK---YSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            V      KE   L D+   +  +L +  EE  +     ++ S++  M++     + L+I
Sbjct: 193 -VRFHEEAKENPALDDEGRAWFKKLEDGDEEARQLWSWFREESLKEFMEL----YETLDI 247

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D F  E  ++      +  +ID L  +G + E       S+  Q  D+++  L     
Sbjct: 248 EFDSFNGEAFYN----DKMDGVIDTLKEKGLLIE-------SQGAQVVDLEKYNL--NVA 294

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           M+         ++DG+  Y   DLA   + K  Y   F   +YV+G +   +  +L+AV 
Sbjct: 295 MIQ--------RTDGATLYMTRDLAAAIFRKKNY--NFVKSLYVVGGEQREHFMQLKAVL 344

Query: 372 AAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------- 415
             +  E    +  +   L+ +  DG   K+S R+G  I L+ V+                
Sbjct: 345 KEMGYEWSDDVEHIPFGLITV--DGK--KLSTRSGRIILLKDVLKDSVDLALQQINEKNP 400

Query: 416 ----------EVGSDSVRFMMLWRKNSELLDFDFCKVKE----QSKENPVFYVQYAYARC 461
                     EVG+ +V F  L   N  + +FDF K++E    +    P  YVQYA AR 
Sbjct: 401 TLGNKELVAHEVGTGAVVFHDL--MNERIGNFDF-KLEEVVRFEGDTGP--YVQYANARA 455

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           +SI R+A +  P+LD       VI  E+ ++T +L     LA++  V+  A   +EP  +
Sbjct: 456 QSILRKAGN--PELDMSNL---VIDDENVWETEKL-----LADFGDVVRRAWRDREPSVI 505

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +L+  F+ ++++ +       + A + +L   RL LV AV+ ++   L ++GV++
Sbjct: 506 AKYALNLSRTFNKYYANSK-------ILAEDEQLN-ARLALVTAVSQVLTESLRLLGVKA 557

Query: 582 PNEM 585
           P EM
Sbjct: 558 PKEM 561


>gi|330507292|ref|YP_004383720.1| arginyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928100|gb|AEB67902.1| arginyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 560

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 143/570 (25%), Positives = 242/570 (42%), Gaps = 94/570 (16%)

Query: 3   LFADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +F DF S ++  LK     C    E+ I    +   P    H  L+++ A  L+  L   
Sbjct: 1   MFLDFMSEVEGLLKSALDRCGFAPEEGINSLGLELTP----HADLASSVAFRLAPVLKKS 56

Query: 61  PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA  I   I  +   V+ V +AG  ++N +++ ++L  +L+  +      GR     
Sbjct: 57  PAAIAGEIHQAIPHEFRYVEKVELAGP-YLNFFMNRAFLNAVLNQALADNAWTGR----M 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV +E  SANP GP+HVGH R +V+GDTL  ++  +G  V  +YY+ND G Q   + +
Sbjct: 112 NEKVIVEHTSANPDGPLHVGHIRNSVIGDTLVRILRRAGCTVDAQYYVNDMGRQEAMVVV 171

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEEKWLPIVK-- 234
            +        +  D   P+     VY+   K +    A +  ++ +    E   P V   
Sbjct: 172 GL------DHFQLDGSKPDHAIARVYIAANKEMESNPAIREEADRVIQLYEAGDPEVTAK 225

Query: 235 -DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGIL 291
              +V+  +  I   L+ +NI HD +  E +F R     + +I+++L + G V   EG L
Sbjct: 226 VQSAVRYAIGGIEQTLQRMNICHDSYHWESEFVR--DGSVAEIVESLEKTGLVAWDEGSL 283

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                       +D     F   MV       L +++G+  Y   DLAY + K     D 
Sbjct: 284 -----------QLDLNDYGFEKKMV-------LKRANGTSLYITRDLAYHRWKSANS-DR 324

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-KMSKRAGDFIT- 409
            + ++G+DH     +L      +  ++ +  V++ E V L     P   MS R G FI+ 
Sbjct: 325 SVDILGADHKLVSGQLRVALGLLGVREPE--VVIFEFVSL-----PTGSMSTRKGKFISA 377

Query: 410 --------------------------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                                     L+ V  +V S +VR+ ++     +   FD+ +  
Sbjct: 378 DELLDEVEKQAMEEVRARRPDESPEFLKEVARQVASGAVRYDVVKVSADKATTFDWKQAL 437

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +  K +  F +QY++AR  SI R+ +        DL   +           E+ LI  +A
Sbjct: 438 DFEKLSAPF-IQYSHARACSILRKGEQ-SEKFQADLLVSDY----------EVALIKKIA 485

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           ++  VI+ A    +P+ LA Y  +LA  F+
Sbjct: 486 QFDLVIDRAACELKPHHLATYARELAESFN 515


>gi|145635709|ref|ZP_01791404.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267032|gb|EDK07041.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 577

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 244/592 (41%), Gaps = 100/592 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + N+ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHANEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+ +L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVKDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVL 384
            DG + Y   D+A  K +YE    D  +    +  S ++++    A  ++ K   + +  
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPDSF 362

Query: 385 LCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
             E     + L +DG P K   R G  + L  ++DE                        
Sbjct: 363 SLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKEAV 420

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +      
Sbjct: 421 IEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFESNTAPYMQYAYTRIRSIFNKT----- 474

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D +      +P   + D  E  L + L ++   ++       P+ L  YLY+LA +F 
Sbjct: 475 --DINSTALLAVPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFS 531

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 532 SFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|190404719|gb|EDV07986.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|323305436|gb|EGA59180.1| YDR341C-like protein [Saccharomyces cerevisiae FostersB]
 gi|323309660|gb|EGA62868.1| YDR341C-like protein [Saccharomyces cerevisiae FostersO]
          Length = 607

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 226/545 (41%), Gaps = 93/545 (17%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FI  + +P +L K ++  I+    +YG   + +  KV IEF S N   P H GH R  ++
Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  LA+L    G+EV R  Y+ D G Q   LA+  F RY  ++AL  +    P  +   V
Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223

Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y++ + K++ ++  S               + +   +E+ L I K +   ++ K I D  
Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             LNI++D++  E    +     +   ID    +G  +E                DR  +
Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DRGAV 322

Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
           L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV+ S    H+   
Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     + K L+ V       +S +K  + V L  ++   ++ M   M K    + 
Sbjct: 383 FEILKQMGFEWAKDLQLVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441

Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            + H   V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R RS+
Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499

Query: 465 FRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R A  I  D     DF L            + +   LI  L +YP V+ NA    EP  
Sbjct: 500 ERNASGITQDKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ L       +        + +V     +L   RL L  A   ++ +G+ ++G+ 
Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602

Query: 581 SPNEM 585
               M
Sbjct: 603 PVERM 607


>gi|90076908|dbj|BAE88134.1| unnamed protein product [Macaca fascicularis]
          Length = 660

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 253/605 (41%), Gaps = 117/605 (19%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L  F++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q   KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            +   ++KSDG YTY  +DLA  K +  E   D +IYV+ S  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWY 429

Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416
             ++        R++  G  +       K   RAG+ + L  ++ E              
Sbjct: 430 DPKV-------TRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 482

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          +    +++  L         F F K+ +  + N   Y+ YA+ R 
Sbjct: 483 DKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRI 541

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520
           RSI R A     ++D ++  +     +   D   E +L   +  +P +++        + 
Sbjct: 542 RSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++
Sbjct: 597 LCDYIYELATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIK 655

Query: 581 SPNEM 585
               M
Sbjct: 656 PVQRM 660


>gi|299143915|ref|ZP_07036995.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518400|gb|EFI42139.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 569

 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 268/619 (43%), Gaps = 106/619 (17%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           +K +D KI    ++  R  IE P +   G  +      L++    +P  IA  I   I  
Sbjct: 9   VKILDGKIPELSEVEIRNAIETPPNYEMGDFAF-PVFSLAKVYKKNPAIIAGEIAGSINS 67

Query: 75  D--PDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           +    V+S       +IN +++   L   +L  +     +YG+  IGKG  V +E+ S N
Sbjct: 68  EYFEKVES----KSAYINFFINKKELAETVLREVSEKNEDYGKLGIGKGENVVVEYSSPN 123

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+GH R  ++GD+L  + AF GY      ++ D G Q   L +++     + +  
Sbjct: 124 IAKPFHIGHIRSTIIGDSLKRIYAFLGYNTIAINHLGDYGTQFGMLIVAIKKWGDKEVIK 183

Query: 192 NDSDLPEGYYPGVYLKHVGKELAD--------KYSSELLNFPEE--KWLPIVKDYSVQAM 241
           ND  +PE     +Y+K   +  AD         + +EL N  EE  K    +++ S+   
Sbjct: 184 NDP-IPE--LLKLYVKINAEAEADPALKDECRHWFNELENGNEEAYKLWEWIREISLDEF 240

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            K+       L++ +D F  E  +    P  +  + ++ A +            S   Q 
Sbjct: 241 NKV----YNMLDVHYDSFNGESFYSDKMPGEVETLKNSGALK-----------LSDGAQI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDH 360
            D+++  L              ++KSDGS  Y   D+A    ++E       IYV+GS  
Sbjct: 286 VDLEKYNL----------PPSLIIKSDGSTIYITRDIAAAHYRHETYHPKRNIYVVGSQQ 335

Query: 361 SGYVKRLEAVAA-----------------------AVSEKKAQINVLLCELVRLYRDG-- 395
             + ++L+AV A                        +S +K ++ V L +++   +D   
Sbjct: 336 ILHFQQLKAVLAEMGYDWSDEVVHVPFGMVSLEEGTLSTRKGRV-VYLEDVLNKAKDKVL 394

Query: 396 -MPIKMSKRAGDFITLR-HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVF 452
            +  +  K+ G+ I  +  +  +VG  +V+F  L+ +  +   FD+ K    + +  P  
Sbjct: 395 EILTEREKQRGEKIENKEELAAQVGIGAVKFQELFNQRIKDYVFDWDKTLTFEGETGP-- 452

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAEYP 506
           YVQY +AR  S+  +        +FD        +E++F+ S      EL L+  + ++ 
Sbjct: 453 YVQYVHARICSLLEKG-------NFD--------KENKFNASLLTLDEELNLLRTIYKFT 497

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+ +A    EPY +  Y+ +LA +F+ +++  +       V   + +L   RL L +AV
Sbjct: 498 DVVIDAHEKYEPYFITRYVVELAKLFNKYYNSTQ-------VIVEDEELKNARLMLCYAV 550

Query: 567 ASIINSGLNIIGVESPNEM 585
            ++I  GLN+IGV +P +M
Sbjct: 551 KTVIKEGLNLIGVAAPEKM 569


>gi|170289840|ref|YP_001736656.1| arginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|229470717|sp|B1L3E4|SYR_KORCO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170173920|gb|ACB06973.1| arginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 632

 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 259/608 (42%), Gaps = 115/608 (18%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPS-YLRKILSSIVVSGI 110
           +++ L LDP   A+ ++ RI +      S   A  G++NL +  + + R IL   + S  
Sbjct: 53  VAKDLNLDPERAAKTVLDRIDMSRIAYSSDAYAESGYLNLRIDKARFFRDILK--LASSE 110

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E GR    KG    +E  SANP  P+HVG  R AV+GD+ + ++ F G++V R Y +ND 
Sbjct: 111 ELGRGE-RKGVVGMVEHTSANPVHPLHVGSGRNAVIGDSFSRILNFLGWDVRRHYLVNDC 169

Query: 171 GAQINTLALS----------------------------VFWRYQQALYNNDSDLPEGYYP 202
             Q+  LA                                WR +   +N++S + E    
Sbjct: 170 NLQVAILAAGRSKVRDLIPKGKVDHWFGLIYAISNAFLEIWRIKNG-FNSESKIEEW--- 225

Query: 203 GVYLKHVGKELADKYSSELL---NFPEEKWLPIVKDY------SVQAMMKIIRDDLKA-L 252
              ++ +G     +   ELL      EE+ + ++++Y      SVQ   +I    L+  +
Sbjct: 226 SEVVERIG-----RMEPELLRIGELSEEEVMSLLREYQRKEGGSVQMFREITESVLRGFV 280

Query: 253 NIQHDIFISEDDFHRGDPSPIRD-----IIDNLARQGY-----------VYEGILPPPKS 296
                + I+ D F R +   I D      I+ L   GY           ++E        
Sbjct: 281 ETLERMGITYDSFDR-ESELIWDGWVDRAIEKLESSGYLKREGKAAYVDLWEAAKGDENV 339

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
           +   +   D    L R   +G+ + R   L +SDG++ Y   D+AY   K++  G     
Sbjct: 340 RKVFELSEDDISKLEREGKLGEVIPRKFYLTRSDGTWLYTGTDVAYSLYKFDGLGVSFCY 399

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V+ S+ +   K + A  A +     ++  L  E+V L    +   MS R G +ITL  V
Sbjct: 400 NVIASEQNMEQKGVRACLALMGHDPGKLIHLSYEMVNL----VGAAMSGRRGLYITLDEV 455

Query: 414 VDE----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +DE                      V   ++++ ++    ++++ F + +V    +EN  
Sbjct: 456 LDEAKRRVEAILKERGIYDEEICEKVAIGALKYGLISVSPNKVVQFRWERVL-NLEENSG 514

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++QYAY R  +I ++A+ +  D D         P E + D +E+ ++  ++E+P  + +
Sbjct: 515 PFIQYAYTRALNIIKKAQGVPEDFD---------PNELKSD-AEITIVQMISEFPERVWS 564

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P  +A Y  +LAS F+  +    ++P L   +   R     RL LV+AV   + 
Sbjct: 565 AFNLMRPDIIASYANELASQFNKFYE---DHPVLSAARPEER---AARLNLVNAVKGTLG 618

Query: 572 SGLNIIGV 579
             +++IG+
Sbjct: 619 LAMDLIGI 626


>gi|327311388|ref|YP_004338285.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947867|gb|AEA12973.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 629

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/577 (24%), Positives = 242/577 (41%), Gaps = 112/577 (19%)

Query: 88  FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN  + P+ L  ++  ++   G  YG +      +  +E  SANP  P+HVGH R AV+
Sbjct: 74  YINADVDPARLAEELFKAVYAMGDRYGYSDRCVHGRYLVEHTSANPLHPLHVGHGRNAVL 133

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--------DLPE 198
           GD L  L+ F G EV   +Y++D G+Q+   AL     Y+ A    D         DL  
Sbjct: 134 GDALVRLLRFCGSEVEVHFYVDDCGSQVMYAALG----YEAARREVDELIGRGVKPDLAV 189

Query: 199 GYYPGVY--------LKHVGKELADKYSSELLNFPEEKWLPIVKDY-SVQA-MMKIIRDD 248
           GY   V         LK + +   D+   E+L   +E WL ++K +  V+  ++  + + 
Sbjct: 190 GYVYSVATAIAEINRLKKLAEGQPDEKRREILAEIDE-WLGVIKRHLDVEPDLVNALTER 248

Query: 249 LKALNIQHDIFISEDDFHRGDPS---PIRDII--------DNLARQG-----YVYEGILP 292
           L   ++  +       + RGD      +R ++        + L R G     + YE  L 
Sbjct: 249 LGQRDLSAEAAELNRLYERGDEEVKRKVRAVVGLVLRGQQETLRRLGISVDSWDYESELA 308

Query: 293 PPKSKTTQKCDMDRKQ-----------LLFRSTMVGDDV------DRP-------LLKSD 328
              +   Q  +  R++           ++FR+    +D+      D P       L +SD
Sbjct: 309 VWNNAAAQLVEDLRRRWPAYIEYKEGAVVFRADKFAEDLKLREELDLPKFIPPVTLTRSD 368

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQINVLLC 386
           G+  Y   D+AY   +  R  D +I V+ S+  H     R+   A    E+  ++     
Sbjct: 369 GTTLYVTRDVAYALWQSRRPVDKVIRVISSEQTHEQAHVRIILYALGYREEAKKLVHYTY 428

Query: 387 ELVRLYRDGMP-IKMSKRAGDFITLRHVVDE-----------------------VGSDSV 422
           E+V      MP +KMS R G ++ L  ++DE                       VG+ ++
Sbjct: 429 EMV-----NMPGMKMSARRGQYVALDEILDEAAERSADVVKEKDREVASVVGEKVGAGAI 483

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF  L     + +DF +  V    + N   ++QY Y R  SI  +A            P 
Sbjct: 484 RFFYLSASPRKPIDFKW-DVVLNMRSNSGPFLQYTYVRASSILEKAGSA---------PG 533

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +      +    E +L+  LA +P  + +A     P  ++ YL  L+ +F+ ++    + 
Sbjct: 534 SPPQIPPQIQPEEAELVERLAMWPWTVASAARDLRPDYISEYLNSLSLLFNSYYE---KY 590

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           P ++    +   +   RL LVHAV +++ +GLNI+G+
Sbjct: 591 PVIK----SEEPVRSFRLALVHAVRTVMRNGLNILGI 623


>gi|218245401|ref|YP_002370772.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226701374|sp|B7JVP5|SYR_CYAP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218165879|gb|ACK64616.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 585

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 247/584 (42%), Gaps = 91/584 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ L++ LG  P  IA+ I+  + ++   +   IAG GFIN+ + P+YL   L
Sbjct: 40  GDYQANIALSLAKKLGEQPRAIAQKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +  +    G        K+ ++F S N    MHVGH R  ++GD +A ++   G++V 
Sbjct: 100 K-VQQNSSSLGVTKADPIEKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   D+ L  G     Y +      A K   E  
Sbjct: 159 RLNHVGDWGTQFGMLIAYLAEVYPDALTTADA-LDIGDLVTFYKQ------AKKRFDEDE 211

Query: 223 NFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272
            F E     +VK         ++ Q + +  R + + +    DI I+E    RG+   +P
Sbjct: 212 KFQETARNQVVKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITE----RGESFYNP 267

Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + DII  L  QG +        K     +C      L   +   GD +   + KSDG Y
Sbjct: 268 LLEDIIKELDHQGLL--------KKDAGAQCVF----LDGFTNKSGDPLPLIVQKSDGGY 315

Query: 332 TYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCEL 388
            Y   DLA  K +  +   + +IYV  +  + +  ++  VA  A +  K  +I  +   L
Sbjct: 316 NYATTDLAALKYRITQDQAERIIYVTDAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGL 375

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------V 417
           V+   DG   K+  R+G  I LR ++DE                               V
Sbjct: 376 VK-GEDGK--KLKTRSGTTIKLRDLLDEAVIYARQDLEKRLAEEGRQESEDFIANVSQVV 432

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L +  +    F + K+    + N   Y+ YAYAR +SI R+      ++DF
Sbjct: 433 GISAVKYADLSQNRTSDYIFSYDKMLA-LQGNTAPYMLYAYARIQSISREG-----NIDF 486

Query: 478 DLFPR--NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +   +   +I QE     +E++L  +L +   VIE       P +L  YLY+L+  F+  
Sbjct: 487 ESLQQEAKIILQEE----TEIELGKYLLQLSEVIEEVEKTLLPNRLCDYLYELSKKFNRF 542

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +    P L+    +   L   RL L    A  +  GL+++G+
Sbjct: 543 YENC---PVLK----SEEPLRTSRLLLCDLTARTLKLGLSLLGI 579


>gi|109079690|ref|XP_001091294.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 660

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 253/605 (41%), Gaps = 117/605 (19%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L  F++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q   KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            +   ++KSDG YTY  +DLA  K +  E   D +IYV+ S  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWY 429

Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416
             ++        R++  G  +       K   RAG+ + L  ++ E              
Sbjct: 430 DPKV-------TRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 482

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          +    +++  L         F F K+ +  + N   Y+ YA+ R 
Sbjct: 483 DKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRI 541

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520
           RSI R A     ++D ++  +     +   D   E +L   +  +P +++        + 
Sbjct: 542 RSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHT 596

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++
Sbjct: 597 LCDYIYELATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIK 655

Query: 581 SPNEM 585
               M
Sbjct: 656 PVQRM 660


>gi|22002514|gb|AAM82666.1| Syr [Synechococcus elongatus PCC 7942]
          Length = 584

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 233/590 (39%), Gaps = 104/590 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N AM L++ LG  P  IAE +V  + +    +   IAG GFIN  L PSYL   L
Sbjct: 40  GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +       G   +    +V ++F S N    MHVGH R  ++GD++A ++ F G+EV 
Sbjct: 100 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210
           R  ++ D G Q   L   +  +Y QAL   D    SDL   Y            + +   
Sbjct: 159 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 218

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + + D  S E      + W         Q +    R + + +  + DI + E      +P
Sbjct: 219 QRVVDLQSGEATA--RQAW---------QLLCDQSRREFQKIYDRLDIQLEERGESFYNP 267

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328
             +  I+++L R G + E              D   + +        +    PL+  KSD
Sbjct: 268 Y-LPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQKSD 312

Query: 329 GSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383
           G Y Y   DLA    +Y  G D    +IYV  S  + +  ++  VA  A      AQI  
Sbjct: 313 GGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQIEH 370

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +   LV+   DG   K+  RAGD + LR ++DE                           
Sbjct: 371 VPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEFIEA 427

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    F F K+    + N   Y+ YAY R + I R+    F
Sbjct: 428 VAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGGIDF 486

Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             LD    P   +   P E       LQL   L E  R +        P +L  YL++L+
Sbjct: 487 AQLD----PVAAVLTEPTERSLAKQVLQLGEVLNEVARDL-------LPNRLCSYLFELS 535

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             F+  +       R   + A   + T  RL +       +  GL+++G+
Sbjct: 536 QTFNQFYD------RCPILNAEEPQRT-SRLLVCDLTGRTLKLGLSLLGI 578


>gi|238756954|ref|ZP_04618142.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704784|gb|EEP97313.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 576

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 244/588 (41%), Gaps = 93/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++ ++ +      V IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIEQLDLTGIASKVEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V   +EY       G        + +++ + N    MHVGH R  ++GD     + F
Sbjct: 92  ---VAEKVEYALTAPKLGVAPVEPLTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 148

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELAD 215
            G+ V R  ++ D G Q   L       Y + + N N SD+      G+    +  + A 
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAK 197

Query: 216 KYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNI----QHDIFISEDDFHR 267
           K   E   F +     +VK    D   +AM + + D   A N     + ++ +++DD   
Sbjct: 198 KTYDEDEEFAKRARAYVVKLQGGDEYCRAMWRKLVDITMAQNQIAYNRLNVTLTQDDVM- 256

Query: 268 GDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+   +P +  I+ +L  +G   E      +  T    D  + +        G+ +   +
Sbjct: 257 GESLYNPMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPL 364

Query: 377 KKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEV 417
           +     ++L +  + +  R G  +K+S       +RAG  I           L+ VV+ V
Sbjct: 365 EHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAV 424

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L +  +    FD+  +      N   Y+QYAY R  S+F++A      L  
Sbjct: 425 GIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVISVFKRAGIDESSLTL 483

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L    VI +E E       L   L ++  VI        P+ +  YLYDLA +F   + 
Sbjct: 484 PL----VITEERE-----ASLATRLLQFEEVITAVAREGTPHVMCSYLYDLAGLFSSFYE 534

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H       + + A++ +    RL+L    A  +  GL+ +G+++   M
Sbjct: 535 H------CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|254415644|ref|ZP_05029403.1| arginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196177594|gb|EDX72599.1| arginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 585

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 239/598 (39%), Gaps = 119/598 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +NAA+ L++PLG  P  IA++++  + +     +  +AG GFIN  L P+YL   L
Sbjct: 40  GDYQSNAALSLAKPLGQPPRAIAQMLINHLDVADICYTPTVAGPGFINFTLKPAYLEAKL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  +     G+E  +    +  +V ++F S N    MHVGH R  ++GD +A ++ F  +
Sbjct: 100 NRNLTHPHLGVEPAK----QPQRVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRDH 155

Query: 160 EVTREYYINDAGAQINTL----------ALSV-----------FWRYQQALYNNDSDLPE 198
           +V R  ++ D G Q   L          AL+            F+R  +  ++ D    E
Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLREVCPEALTTAEAVDLGDLVSFYRQAKKRFDTDEVFQE 215

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G E   +            W         Q + +  R + + +    D+
Sbjct: 216 AARQEVVKLQAGAEDTKR-----------AW---------QLLCEQSRREFQVIYDLLDV 255

Query: 259 FISEDDFHRGDP--SPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            I+E    RG+   +P+  D++ +L + G + E              D   K +      
Sbjct: 256 HITE----RGESFYNPLLPDVVKDLEQSGLLVE--------------DQGAKCVFLEGFT 297

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
                  PL+  KSDG Y Y   DLA  + + ++ G   +IYV  +  + +  ++  VA 
Sbjct: 298 NKKGEPLPLIVQKSDGGYNYATTDLAALRYRIDQNGAKRIIYVTDAGQANHFAQVFQVAQ 357

Query: 373 ------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT----- 409
                              + E   ++     E VRL RD +   +++   D  T     
Sbjct: 358 RAGWLPEIVEIVHVPFGLVLGEDGKKLKTRSGETVRL-RDLLDQAIARARADLETRIQAE 416

Query: 410 --------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                   + HV   VG  +V++  L +  +    F F K+    K N   Y+ YAYAR 
Sbjct: 417 GRQETEEFIEHVAQVVGMAAVKYADLSQNRTSNYVFSFDKMLS-LKGNTAPYLLYAYARI 475

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           +SI R+       +DF+    +   Q S  +  E  L  HL +   VI+       P +L
Sbjct: 476 QSIGRKG-----GIDFEQLRTST--QVSLKEDQEATLAKHLLQVNEVIKEVEQELLPNRL 528

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             YLY+L+  F   +    + P L+        + + RL L    A  +  GL+++G+
Sbjct: 529 CQYLYELSEKFSQFYD---QCPVLK----AEESVRLSRLILCDLTAQTLKLGLSLLGI 579


>gi|145632971|ref|ZP_01788704.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986627|gb|EDJ93193.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|309973254|gb|ADO96455.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 577

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 141/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEVFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  I L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTIKLADLLDEAIERATVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A N  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAENESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|253688194|ref|YP_003017384.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511652|sp|C6DFD9|SYR_PECCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|251754772|gb|ACT12848.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 576

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/612 (22%), Positives = 238/612 (38%), Gaps = 123/612 (20%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I +      G    N  M +++ LG+ P  +AE +V  + ++   +   IAG GFIN++L
Sbjct: 28  IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVG 147
              +        V S +E   N    G        + I++ + N    MHVGH R  ++G
Sbjct: 88  DKQW--------VASQVENALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQAL 189
           D  A  + F G+ V R  ++ D G Q   L                   L  F+R  +  
Sbjct: 140 DAAARTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASEMDLSDLEAFYREAKKH 199

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y++D+D  E    G  +K  G    D+Y  ++       W  +V     Q  +   R  L
Sbjct: 200 YDDDADFAE-RARGYVVKLQG---GDEYCRQM-------WRKLVDITMTQNQINYER--L 246

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                + D+ + E  ++   P     I+ +L  +G   E       S+      +D  + 
Sbjct: 247 NVTLTKQDV-MGESLYNSMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK- 293

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY----- 363
                  G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    +     
Sbjct: 294 ----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAW 349

Query: 364 --VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             V++   V  +VS +     ++L       +DG P K   RAG  I L  ++DE    +
Sbjct: 350 TIVRKAGYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYDRA 401

Query: 422 VRFMMLWRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFY 453
           ++  ++  KN           ++++     K  + SK                  N   Y
Sbjct: 402 LK--LIAEKNPQMESDELSALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  SIF++A      +  D   + +       D  E  L   L ++   I +  
Sbjct: 460 MQYAYTRVASIFKRA-----GIQEDSLTQPITLS----DEREFALATRLLQFEETITSVA 510

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YLYDLA +F G + H         + A +  +   RL+L    A  +  G
Sbjct: 511 REGTPHVMCSYLYDLAGLFSGFYEH------CPILNAESDDVRQSRLRLALLTAKTLKQG 564

Query: 574 LNIIGVESPNEM 585
           L+ +G+E+  +M
Sbjct: 565 LDTLGIETVEKM 576


>gi|219119306|ref|XP_002180416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407889|gb|EEC47824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 573

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 253/593 (42%), Gaps = 80/593 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRK 100
           G    NAAM L++ L L P   A  IV  +  KI   ++   IAG GF+NL    SYL +
Sbjct: 11  GDYQVNAAMGLAKALNLSPRECAAQIVKALQPKIQSFMEEPEIAGPGFVNLRFRTSYLTQ 70

Query: 101 ILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            +SS+  +G   GR  +    +  K+ ++F S N    MHVGH R  ++GDTL +++ F+
Sbjct: 71  AVSSM--AGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTIIGDTLCNVLEFA 128

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216
           G+EVTR  ++ D G Q   L   +   Y  AL ++ + D+  G    +Y      + A K
Sbjct: 129 GHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALRSDTADDVDLGDLVQLY------KAAKK 182

Query: 217 YSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP- 270
              E   F       +VK     +  + A   +     K     +D    E    RG+  
Sbjct: 183 RFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGLVERGESF 242

Query: 271 -SP-IRDIIDNLARQGYVYE--GIL-------------PPP----KS------KTTQKCD 303
            +P ++D++D L  +G   E  G L             P P    KS       TT    
Sbjct: 243 YNPFLKDVVDELVEKGLAVESDGALVVYLEGYTNRDGSPLPMIVRKSDGGFNYATTDLAA 302

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSD-GSYTYF-----AADLAYFKCKYERGFDNMIY--V 355
           M  + L+ R+   G+  DR L  +D G   +F     A  +A F C+     +++ +  V
Sbjct: 303 MRHRTLMPRAES-GERADRVLYVTDAGQAQHFEMVFEAGKVAGF-CREGASLEHVPFGLV 360

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVV 414
            G D   +  R        S +  ++  LL E VR+    +  +      +F+  + +V 
Sbjct: 361 QGEDGKKFATR--------SGETVKLKDLLDEAVRISGADLKKRNENVDQEFLDRVDNVA 412

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIF 472
             VG  +V++  L         F + ++   +  N   Y+ YAYAR   I R+A  ++  
Sbjct: 413 RIVGIGAVKYADLSMNRESNYRFSYDRMLSLNG-NTAPYMLYAYARVCGIIRKASGQEGT 471

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             +D+      +I  E     SEL+LI +L + P V+        P ++  YL++ +  F
Sbjct: 472 GAIDWPKASEIMITHE-----SELELIRNLVKLPDVLNEVERELYPNRMCDYLFETSQKF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +     N      +A + ++   RL L  A A  I   L ++G+E+  +M
Sbjct: 527 NQFYESCSVN------KAESEEIKASRLSLCTATAGTIRLLLTLLGIETLEKM 573


>gi|90416671|ref|ZP_01224601.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331424|gb|EAS46660.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 579

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 134/588 (22%), Positives = 253/588 (43%), Gaps = 90/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ L ++P  +AE I+    +D   D + IAG GFIN++L  ++L   L
Sbjct: 37  GDYQANGAMAAAKRLKMNPRDLAEKIIQLADLDGIADRLEIAGPGFINIHLCDAFLTASL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  +   +   +L G   +V +++ S N    MHVGH R  ++GD +A ++ + G+ V 
Sbjct: 97  GTNTLY-TQSESDLDGTQKRVVVDYSSPNLAKEMHVGHLRSTIIGDAVARVLEYQGHTVL 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R+ ++ D G Q   L   +    QQ      ++L  G     Y      + + K+    L
Sbjct: 156 RQNHMGDWGTQFGMLIAEL---EQQLSEGEQAELALGDLELFY------QQSKKHFDADL 206

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI-------------FISEDDFHRGD 269
            F +     +VK  S  A  + +      +++ H++              I  +  +  D
Sbjct: 207 EFADTARAYVVKLQSGDAHCRGLWQKFIQVSVAHNLEIYAQLNVGLTAEHIMPESAYNDD 266

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLL--K 326
              +++++D+L  +    E                D  +++F   +   + +  P++  K
Sbjct: 267 ---LQNVLDDLLAKDLALES---------------DGAKVVFLDELADKNGNPSPMIVQK 308

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEA-------VAAAVSEKK 378
           S G + Y  +DLA  + +  +   D ++Y + +  S ++K++ A       V+ AVS + 
Sbjct: 309 SGGGFLYATSDLAAMRYRVGQLQADRILYFIDARQSLHMKQVFAAARKADYVSDAVSLEH 368

Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI----------TLRHVVDEVGS 419
                ++ +  R +  R G  +K++       +RA   +           + ++   VG 
Sbjct: 369 HPFGTMMGKDGRPFKTRSGGTVKLADLLVEAVERAEQLLRSKNTDLGEDEISNIARSVGI 428

Query: 420 DSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
            ++++  L   R N  + D+D     E    N   Y+QYAY R RSIFR+A      +  
Sbjct: 429 GAIKYADLSKTRTNDYIFDWDAMLSFEG---NTAPYLQYAYTRIRSIFRKAG-----ISA 480

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           + F   +   E +    E  LI+ L ++  V++       P+ L  Y+Y+LAS +   + 
Sbjct: 481 ESFSAEISITEHQ----EKALIMKLLQFDNVVDQVAAEGYPHILCNYVYELASAYMTFYE 536

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H    P L+       +L   RLQL    +  I  GL+++G+E   +M
Sbjct: 537 H---CPVLK--DEVPEELQKSRLQLCKLTSETIAKGLDLLGIEVMEKM 579


>gi|320322071|gb|EFW78167.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 578

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 247/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPYDEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D + Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVQYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|328464593|gb|EGF35958.1| arginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 551

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 143/599 (23%), Positives = 253/599 (42%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  S+   G  ++N  
Sbjct: 15  LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 71

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  I+     YG    G+G  + I+  S N   PM +GH R  V+G+++A
Sbjct: 72  IDHEKLVSSTLKDILSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 130

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 131 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 182

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256
               ++  E  N PE      +W   ++D   +A  + K  R    +D     K L +  
Sbjct: 183 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 238

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 239 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 277

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V     
Sbjct: 278 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 336

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 337 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAISLAKKQIEEKNPDLADKDQ 395

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A 
Sbjct: 396 VAHDVGVGAVIFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 451

Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +              P E +F   D     +   LA++PR+I  +    EP  +A +  
Sbjct: 452 AM-----------GEKPSEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 500

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 501 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 551


>gi|332307387|ref|YP_004435238.1| arginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174716|gb|AEE23970.1| arginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 578

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 243/596 (40%), Gaps = 89/596 (14%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R      G    N AM L++ L   P  IA+ IVA +++D   + + +AG GFIN+YL
Sbjct: 28  LSRATKVGFGDYQFNGAMALAKVLKQKPRDIADKIVAAVELDGIAEKLEVAGPGFINIYL 87

Query: 94  SPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           S  +L   LS         IE  R+       V +++ S N    MHVGH R  ++GD +
Sbjct: 88  SKDWLATQLSEAAADPRLNIETQRS-----KTVVVDYSSPNLAKEMHVGHLRTTIIGDAV 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              + F G++V R+ ++ D G Q   L           L + +  L         L    
Sbjct: 143 VKALEFMGHKVIRQNHMGDWGTQFGML-----------LAHLNDKLESNQVAETAL---- 187

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-----IFISEDDF 265
            +L D Y    + F EE       D + + ++K+   D   L +  +     I  SE+ +
Sbjct: 188 SDLEDFYREAKVRFDEEDGFA---DRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVY 244

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-- 323
            + + S  R  I   +   +    ++   ++K     + +  Q++F   +  D   +P  
Sbjct: 245 DKLNVSLTRADIMGESAYNHDLANVVSELQAKGL-AVESEGAQVVFLPEL-ADKEGKPAA 302

Query: 324 --LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             + KS G Y Y   DLA  + + ++   D  + +  +  + + K+ E VA      + +
Sbjct: 303 YIVQKSGGGYLYATTDLAAVRYRNKQLHADRTLILTDARQALHFKQTEIVARKAGFIEPE 362

Query: 381 INVLLCEL-VRLYRDGMPIK-----------------------MSKRAGDFIT--LRHVV 414
                C   + L  DG P K                       +SKR  D  T  L+ + 
Sbjct: 363 QTYEHCPFGMMLGSDGRPFKTRTGGTVKLVELLDEAVERAQALLSKRETDLSTDELKVLA 422

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQA----K 469
           +++G  +V++  L +  +   D+ F      S E N   Y+QYAY R  SIFR+A    K
Sbjct: 423 NKIGIGAVKYADLSKNRTT--DYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHK 480

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +   +  D       PQE      +LQ       Y   I        P+ L  YLY+LA
Sbjct: 481 TLNAAITLD------APQEKMLAVKQLQ-------YVEAINQVIAEGTPHVLCTYLYELA 527

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S+F   +      P L+  +    ++   R+ L    A  + SGL+++G+++   M
Sbjct: 528 SLFMSFY---EACPMLK--EGIAPEVRDSRMTLAALTAKTLQSGLSLLGIDTMERM 578


>gi|238788535|ref|ZP_04632328.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723448|gb|EEQ15095.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 576

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 141/597 (23%), Positives = 242/597 (40%), Gaps = 111/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +D     V IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIASKVEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V S +E+       G        + +++ + N    MHVGH R  ++GD     + F
Sbjct: 92  ---VASKVEHALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 148

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELAD 215
            G+ V R  ++ D G Q   L       Y + + N N SD+      G+    +  + A 
Sbjct: 149 LGHNVIRANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAK 197

Query: 216 KYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHR 267
           K   E   F +     +VK     +Y  Q   K++   +    I +D   + +++DD   
Sbjct: 198 KTYDEDEEFAQRARAYVVKLQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM- 256

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMV-------- 316
           G+                +Y  +LP   +      D+  K L   S   T+V        
Sbjct: 257 GES---------------LYNAMLPGIVA------DLKAKGLAVESDGATVVYLDEYKNK 295

Query: 317 -GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRL 367
            G+ +   + K DG Y Y   D+A  K +YE  G D ++Y + +    +       V++ 
Sbjct: 296 DGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKA 355

Query: 368 EAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT--------- 409
             V  +V  +     ++L +  + +  R G  +K+S       +RAG  I          
Sbjct: 356 GYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPAD 415

Query: 410 -LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L+ VV+ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  SIF++A
Sbjct: 416 ELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSIFKRA 474

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L   L    VI ++ E       L   L ++  VI        P+ +  YLYDL
Sbjct: 475 GIDENSLTLPL----VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDL 525

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F   + H       + + A + +    RL+L    A  +  GL+ +G+++   M
Sbjct: 526 AGLFSSFYEH------CQILNAESEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|259503640|ref|ZP_05746542.1| arginine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168393|gb|EEW52888.1| arginine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 562

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 146/606 (24%), Positives = 261/606 (43%), Gaps = 110/606 (18%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           ++I+D+I  ERP+D  +G  +      L++ L   P  IA  +V +I      + V +AG
Sbjct: 21  EEIVDKI--ERPKDANNGDYAF-PTFFLAKTLHKAPQMIAADLVEKID-QAGFEKVVVAG 76

Query: 86  KGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             +IN +L  + +  +I+ +I+     YG+  +G G  V I++ S N   PM +GH R  
Sbjct: 77  P-YINFFLDKAQVGAEIIKAILADPAGYGKKDLGHGANVTIDYSSPNIAKPMGMGHLRST 135

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPG 203
           ++G+ +A ++    Y   R  Y+ D G Q   L A    W  ++ +  +  +    YY  
Sbjct: 136 MIGEAIARILEKENYTPVRIDYLGDWGTQFGKLMAAYQMWGSEEEVKKDPINTLLKYYVR 195

Query: 204 VYLK--------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +  +          G+E    + ++L +  +E W   +  +  Q  ++  R     L++ 
Sbjct: 196 INTEAEEHPEYTDAGRE----WFAKLEHGDKEAWR--LWHWFRQISIERFRKVYDMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+ + D    +            S+  Q  D+D  +L      
Sbjct: 250 FDSFNGEAFSAQKMDDPIQLLKDKHLLKA-----------SRGAQIVDLDAYKLT----- 293

Query: 316 VGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
                  PL +KS+G+ TY   DLA   Y K  +  G    +YV+G++   Y K+L+AV 
Sbjct: 294 ------PPLIIKSNGTTTYITRDLATALYRKRMF--GHAKSLYVVGAEQENYYKQLKAVL 345

Query: 372 AAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------ 415
             +     ++   I+  L  L     +G   KMS R G+ + L  V++            
Sbjct: 346 KEMGFTWWDQLEHISFGLMNL-----NGQ--KMSTRKGNVVNLEDVLNDSIKLARQQIAE 398

Query: 416 -------------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARC 461
                        +VG  +V F  L       ++F     VK + +  P  YVQYA AR 
Sbjct: 399 KNPDLPNADEVAKQVGVGAVIFHDLKNDRRNAVNFKLEDVVKFEGETGP--YVQYARARA 456

Query: 462 RSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
            SI R+   +D F  +D            ++   +   ++  L++Y  V+E A +  +P 
Sbjct: 457 ESILRKGGVRD-FSAVDL-----------TKVGDAAWDILSFLSQYSDVVERAAVNYDPS 504

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y  +L+  F+ +++H       R +Q +  +    RL LV AV+ I+   L ++ +
Sbjct: 505 VIAKYALELSKKFNQYYAHN------RILQDDEGQTA--RLALVQAVSHILKDALAMLDI 556

Query: 580 ESPNEM 585
           ++P+EM
Sbjct: 557 KAPDEM 562


>gi|229845606|ref|ZP_04465732.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811473|gb|EEP47176.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 577

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 237/593 (39%), Gaps = 102/593 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISEDDFHRGDP-- 270
              F E+    +VK  S     +++   L  + +Q         ++ ++E D   G+   
Sbjct: 203 DEVFAEKARNYVVKLQSGDEYCRMMWKRLVDITMQQNQHNYNRLNVTLTEKDV-MGESLY 261

Query: 271 SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           +P +  I+++L +QG   E  G L     +   K               GD +   + K 
Sbjct: 262 NPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQKK 307

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKKA 379
           DG + Y   D+A  K +YE    N   V                 ++   V  + S +  
Sbjct: 308 DGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHK 367

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
              ++L       +DG P K   R G  I L  ++DE                       
Sbjct: 368 NFGMMLG------KDGKPFKT--RTGGTIKLADLLDEAIERATVLINEKNTNLSNDEKEA 419

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +     
Sbjct: 420 VIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT---- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +F
Sbjct: 475 ---DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIF 530

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + H         + A N  + + RL+L       +  GL ++G+++  +M
Sbjct: 531 SSFYEH------CPILNAENESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|268589751|ref|ZP_06123972.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314906|gb|EFE55359.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 576

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 240/602 (39%), Gaps = 121/602 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE +V  + ++     V IAG GFIN++L P+++ K +
Sbjct: 37  GDYQANGVMGAAKKMGIAPRQLAEQLVNHLDLEGIASKVEIAGPGFINIFLEPAWVEKHV 96

Query: 103 SSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + S        +G    K   + I++ + N    MHVGH R  ++GD  A    F G
Sbjct: 97  EEALAS------QRLGIAPVKPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIG 150

Query: 159 YEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDL---P 197
           ++V R  ++ D G Q   L                   L  F+R  +  Y+ D +     
Sbjct: 151 HKVIRANHVGDWGTQFGMLIAYLEKVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRA 210

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            GY        V  +  D+Y  ++       W  +V D ++Q   +  R        + +
Sbjct: 211 RGYV-------VKLQSGDEYCRQM-------WRKLV-DITMQQNQETYR--------RLN 247

Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + ++EDD   G+    S +  I+ +L  +G   E       S+      +D     F++ 
Sbjct: 248 VTLTEDDV-MGESLYNSMLPGIVADLKAKGLAVE-------SEGATVVFLDE----FKNK 295

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--- 370
             G+ +   + K DG + Y   D+A  K +YE    D  +Y + S    ++ +   +   
Sbjct: 296 E-GEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDSRQHQHLMQAWTIVRK 354

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
           A  + E  A  + +   +  L +DG P K   R G  + L  ++DE              
Sbjct: 355 AGYIPESMALEHHMFGMM--LGKDGKPFK--TRTGGTVRLSDLLDEAVERAQALIREKNP 410

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S
Sbjct: 411 DMPEDELLNVANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVAS 469

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IF++A     DL   +         S  D  E+ L   L ++   I        P+ +  
Sbjct: 470 IFKKANLTHADLTLPI---------SLQDPREIALATRLLQFEETILTVARDGTPHVMCA 520

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YLY+LA +F G + H         + A++      RL+L       + +GL+ +G+E+  
Sbjct: 521 YLYELAGLFSGFYEH------CPILSADDEAQRQSRLKLAALTQKTLKTGLDTLGIETVE 574

Query: 584 EM 585
            M
Sbjct: 575 RM 576


>gi|9715730|emb|CAC01600.1| putative arginyl-tRNA synthetase [Anabaena circinalis 90]
          Length = 585

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 152/601 (25%), Positives = 246/601 (40%), Gaps = 113/601 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG  P  IA  IV+++ +    +   IAG GFINL L  SYL   L
Sbjct: 40  GDYQANVALSLSKKLGKQPRIIAGEIVSKLDVSDICEPPEIAGPGFINLKLQTSYLEAQL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           ++I +    GI    N      K  ++F S N    MHVGH R  ++GD++A ++ F G+
Sbjct: 100 NAIQIDARLGIPTATN----PQKQIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFCGH 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  ++ D G Q   L   +   Y  AL   ++              +G +L + Y  
Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLREVYPDALTTANA------------LDIG-DLVNFYRK 202

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKI---IRDDLKA-----------LNIQHDIFISEDDF 265
               F E+   P+ ++ S Q ++++     D L A             I +D+ ++ +  
Sbjct: 203 AKQRFDED---PVFQETSRQEVVRLQAGAEDTLHAWKLLCEQSRQEFQIIYDL-LNVELI 258

Query: 266 HRGDP--SPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            RG+   +P+   +++NLA  G +        +S    KC      L   +   G+ +  
Sbjct: 259 ERGESFYNPLLPKVVENLATTGLL--------ESSQGAKCVF----LDGFTNREGNPLPL 306

Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            + K+DG Y Y   DLA    +  E     ++YV     S +  +   VA     +KA  
Sbjct: 307 IVQKTDGGYNYATTDLAALGYRIQEDKAKRIVYVTDEGQSNHFAQFFQVA-----RKANW 361

Query: 382 NVLLCELVR------LYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
                ELV       L  DG   K   R+GD + LR ++DE                   
Sbjct: 362 IPEDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDEAINRARADIENRLQEDERT 419

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V++  L +  +    F + K+    K N   Y+ YAY R + I
Sbjct: 420 ETEEFMQNVAEVVGISAVKYADLSQNRTSSYVFSYDKMLS-LKGNTAPYLLYAYVRIQGI 478

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            RQ    F +L  +   R ++ +E     +EL L  HL +   VI+       P +L  Y
Sbjct: 479 SRQGNIDFTNLGIN---RQILLKED----AELTLAKHLLQLDEVIKEVEQDLLPNRLCDY 531

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY L+  F+  + +    P L+    +       RL L    A  +  GL+++G++    
Sbjct: 532 LYQLSDKFNKFYENC---PVLK----SEEPARTSRLMLCDLTAKTLKLGLSLLGIKVLER 584

Query: 585 M 585
           M
Sbjct: 585 M 585


>gi|91080725|ref|XP_975392.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum]
 gi|270005463|gb|EFA01911.1| hypothetical protein TcasGA2_TC007521 [Tribolium castaneum]
          Length = 671

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 151/618 (24%), Positives = 250/618 (40%), Gaps = 122/618 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILS---RPLG--LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +VI    +   G    N+AM +S   + LG  + P  IA  IV  +     VD + +AG 
Sbjct: 112 VVITLSNNAKFGDYQCNSAMQISNIYKQLGKKVSPRDIANKIVENVSPHELVDKLEVAGP 171

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+++S ++  + LS+I   G+   R    K  +V ++  S N    MHVGH R  ++
Sbjct: 172 GFINVFVSKAFGLRNLSTIFTHGV---RPPPYKKLRVVVDLSSPNIAKEMHVGHLRSTII 228

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187
           GDT+  L+ F G++V R  +I D G Q   L                    L  F++  +
Sbjct: 229 GDTICRLLEFLGHDVLRINHIGDWGTQFGMLIVHLQEKFPDYLSKAPPISDLQAFYKESK 288

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             ++ D D  +  Y GV           K  S   N+ +  W         Q +  + R 
Sbjct: 289 KRFDEDEDFKKRAYAGVV----------KLQSGDPNYIK-AW---------QLICDVSRK 328

Query: 248 DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           + + +  + D+ + E    RG+    S + DI+  L   GY+ +              D 
Sbjct: 329 EFQVIYDRLDVKLIE----RGESFYQSRMNDIVKELEAGGYLED--------------DE 370

Query: 305 DRKQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
            RK       M GD  D      ++KSDG YTY  +DLA  K +  E   D +IYV  + 
Sbjct: 371 GRK------VMWGDKNDGNIPFTVVKSDGGYTYDTSDLATIKQRIVEEKGDWLIYVTDAG 424

Query: 360 HSGYVKRLEAVAAAVS------------------EKKAQINVLLCELVRL---YRDGMPI 398
              +   L  +A  +                   E K +      + VRL     +G+  
Sbjct: 425 QGTHFYILFQIARKIGLLTDNIRVDHVPFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKR 484

Query: 399 ---KMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
              K+ ++  D +     L+   + +    +++  L         F F K+ E  K N  
Sbjct: 485 ALDKLKEKGRDQVLTPEELKQAQESIAYGCIKYADLSHNRHHEYVFSFDKMLE-DKGNTA 543

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            Y+ YAY R RSI R A   F D    D+   + I  + E    E +L   L ++P  ++
Sbjct: 544 VYLLYAYTRIRSIARTAN--FDDKKIEDVAKSHTISLDHE---KEWKLAKVLLKFPEELD 598

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVA 567
             T    P+ L  Y+Y++A+ F   +       ++     V+ N+      R+ L  A A
Sbjct: 599 KVTKDLCPHHLCEYVYEIATTFTEFYDSCYCVEKDSSGDIVKVNHG-----RILLAEATA 653

Query: 568 SIINSGLNIIGVESPNEM 585
            ++   L+I+G++   +M
Sbjct: 654 RVMAKCLDILGLKPVAKM 671


>gi|320330828|gb|EFW86802.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 578

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 247/602 (41%), Gaps = 101/602 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPSDEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A +   E   F E     +VK  +  A    +    K +++ H        ++ ++  
Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D   G+ +    + +++++L   G + E       S   Q   ++     FR+    DD 
Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300

Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
             P++  K+ G Y Y   DLA   ++ K  +  D + Y +    + + +++  VA  A  
Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVQYFVDQRQALHFQQVFEVARRAGF 359

Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410
                Q+  +    +          RDG  +K+        +RA   +           L
Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+   
Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476

Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 FD     ++   PQE E       L   LA++   + N      P+ L  YLYD
Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526

Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           LA +F   + +    G ENP  +            RL+L       +  GL+++G+E+  
Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576

Query: 584 EM 585
            M
Sbjct: 577 RM 578


>gi|291387790|ref|XP_002710413.1| PREDICTED: arginyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 660

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 256/584 (43%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM + + L      ++P  IAE I   I  +  ++   IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGICQMLKAKEQKVNPREIAENITKHIPNNEYIEKTEIAGPGFINIHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + LS+++V+G+      +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLSNLLVNGVHLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 229 GYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K + +  +  + R +   +    +I + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKSPDIIKAWKL--ICDVSRQEFNKIYDALEISLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + D+++    +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 342 MNDVVNEFEEKGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374
           Y  +DLA  K + +E   D +IYV+ S  + + + + A A  +                 
Sbjct: 384 YDTSDLAAIKQRLFEEKADMIIYVVDSGQALHFQAIFAAAQMIGWYDPKVTRVFHAGFGV 443

Query: 375 --SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VR   L  +G+   M K   +  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLVDLLEEGLKRSMDKLKEKERDKVLTAEELQAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D ++  +
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQK 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA++++ G +I+G++    M
Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMSKGFDILGIKPVQRM 660


>gi|161507929|ref|YP_001577893.1| arginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348918|gb|ABX27592.1| Arginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 561

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 253/599 (42%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  S+   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG    G+G  + I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDVLSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256
               ++  E  N PE      +W   ++D   +A  + K  R    +D     K L +  
Sbjct: 193 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 287

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V     
Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 347 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIEEKNPDLADKDQ 405

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A 
Sbjct: 406 VAHDVGVGAVIFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 461

Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +              P E +F   D     +   LA++PR+I  +    EP  +A +  
Sbjct: 462 AM-----------GEKPSEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 561


>gi|256852165|ref|ZP_05557551.1| arginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661802|ref|ZP_05862713.1| arginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282933663|ref|ZP_06339022.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205670|ref|ZP_06923066.1| arginine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615211|gb|EEU20402.1| arginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547549|gb|EEX23528.1| arginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281302196|gb|EFA94439.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297150248|gb|EFH30545.1| arginine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 558

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 153/622 (24%), Positives = 267/622 (42%), Gaps = 128/622 (20%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77
           I  ++++ K+ ++ + IERP++   G  +   A IL++ L  +P  IA+ IVA +  D +
Sbjct: 11  ISSQVELPKEKINSL-IERPKNPEMGDYAF-PAFILAKTLHKNPAEIAKAIVANLS-DDN 67

Query: 78  VDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            + +   G  ++N  +  S L  + L  ++V    YG   +G G  V I+  S N   PM
Sbjct: 68  FEKIQAVGP-YVNFSIKKSALISQTLEEVLVKKNNYGNQNLGSGN-VAIDMSSPNIAKPM 125

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
            +GH R  V+G+++A ++   GY   +  ++ D G Q   L  +        L+ N+ D+
Sbjct: 126 SMGHLRSTVIGNSIAKILTKVGYTPIKINHLGDYGTQFGKLITAY------KLWGNEEDV 179

Query: 197 PEG-------YYPGVY--------LKHVGK------ELADKYSSELLNFPEEKWLPIVKD 235
            +        YY   +        L+  G+      E  D  + +L N     W    + 
Sbjct: 180 KKDPINSLFHYYVKFHEVAEEKPELEDEGRAWFKKLEGGDSEAVKLWN-----WF---RK 231

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            S+Q   +I     K LN++ D +  E  ++      +  I+D L ++  + E       
Sbjct: 232 VSLQEFNRI----YKKLNVEFDSYHGEAFYN----DKMDAIVDELRQKDLLVE------- 276

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDN 351
           S+  Q  D+            G D +  + LKSDG+  Y   DL    Y K  Y+  F  
Sbjct: 277 SRGAQVVDL------------GPDKNPAMILKSDGTSIYTTRDLTAAEYRKKHYD--FVQ 322

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL- 410
            +YV+G++ S Y ++L+ V   +  + A  ++       + + G   K+S R G+ + L 
Sbjct: 323 ALYVVGNEQSAYFEQLKEVLKKMGHEWAD-DIHHIPFGLITQGGK--KLSTRKGNVVFLD 379

Query: 411 ------------------------RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVK 443
                                     V +EVG  +V F  L  KN  L  FDF     V+
Sbjct: 380 KVLEDAVELAMKQIETKNPSLPNKEQVANEVGIGAVVFHDL--KNDRLDAFDFNLEEVVR 437

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            + +  P  YVQY  AR +SI R+A  I    + DL            D     +   LA
Sbjct: 438 FEGETGP--YVQYTNARAQSILRKANQIVTIDELDL-----------SDEWAFAVAKDLA 484

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P V+  A+   EP  +A +   LA  F+ ++++      +R +  +++     RL LV
Sbjct: 485 DFPAVLAKASEKYEPSIIAKFALKLAKHFNKYYAN------VRILDEDDQ--LAARLALV 536

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A + ++   L+++GV +P EM
Sbjct: 537 KATSIVLTESLHLLGVAAPKEM 558


>gi|209695554|ref|YP_002263483.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238065084|sp|B6EI57|SYR_ALISL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|208009506|emb|CAQ79795.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 577

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 139/591 (23%), Positives = 244/591 (41%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKRLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  +   TK NI  ++ + N    MHVGH R  ++GD +   + F G+ 
Sbjct: 97  EAALADE----RLGVALETKQNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152

Query: 161 VTREYYINDAGAQINTL--ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           VTR  +I D G Q   L   L    + +  +    SDL EG+Y         K+L D+  
Sbjct: 153 VTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDL-EGFY------RESKKLYDE-- 203

Query: 219 SELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                  +E++    + Y V  Q       D  K L +   +  ++ ++ R + S  RD 
Sbjct: 204 -------DEEFAVTARGYVVKLQGGDAFCADMWKKL-VDVTMVQNQRNYDRLNVSLTRDN 255

Query: 277 IDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330
           +   +    +Y  +L P  +   +K    + D  Q+++        GD +   + K DG 
Sbjct: 256 VMGES----MYNSMLAPIVADLQEKGLAVESDGAQVVYLDEYKNKDGDPMGVIVQKRDGG 311

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           + Y   D+A  K ++E    D ++Y + S    +       V++   V  +VS +     
Sbjct: 312 FLYTTTDIACAKYRFEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFG 371

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           ++L       +DG P K   RAG  + L  ++DE    ++   ++  KN +L   +  K+
Sbjct: 372 MMLG------KDGRPFKT--RAGGTVRLADLLDEAEQRAI--ALIEEKNKDLSTEEKAKI 421

Query: 443 ---------------KEQSKE-------------NPVFYVQYAYARCRSIFRQAKDIFPD 474
                          K ++ +             N   Y+QYAY R  SIF +A     D
Sbjct: 422 ATTVAMAAVKYSDLSKHRTTDYIFDWDNILAFEGNTAPYMQYAYTRVASIFSKA-----D 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L  D    N+  +    D  E  LI  L ++   ++      +P+ +  YL++LA  F  
Sbjct: 477 LSMD----NLAGEVKITDEKEKALITKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSS 532

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           +  ++  +   RL+L    A  I  GL+++G+E+   M
Sbjct: 533 FYEA------CPILNNDDESIKQSRLKLAALTAKTIKQGLDLLGIETLERM 577


>gi|104773879|ref|YP_618859.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123378467|sp|Q1GAN1|SYR_LACDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|103422960|emb|CAI97631.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 565

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 113/604 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERP+D   G  +      L++ +   P  IA  +    KID        A   +IN 
Sbjct: 25  VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L  S     IL  I+     YG   +G G  V  E+ S N   PM +GH R  ++G+ +
Sbjct: 82  FLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAI 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203
           A ++A  G++  R  Y+ D G Q   +  +        ++ ND+D+ +        YY  
Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193

Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           V +    +E  +      ++ S+L +  EE  +     ++ S++   K+       L++ 
Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+     + R+    +G+L   KS+  +  D+++  L      
Sbjct: 250 FDSFTGEAFSAQMMDKPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  PL+  KS+G+ TY   DLA   Y K  Y  GF   IYV+G +   Y ++L A 
Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +    A  +++      +  +G   KMS R G+ + L  V++E              
Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401

Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  +R+N   +DF+  +V K + +  P  YVQYA AR  
Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYARARGE 457

Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+ R++    F D D            ++    E  L+  +A Y   I+ A    +P  +
Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMARYADTIQKAMETYDPSAI 506

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++ V++
Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561

Query: 582 PNEM 585
           P+EM
Sbjct: 562 PDEM 565


>gi|220931665|ref|YP_002508573.1| arginyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782967|sp|B8CWA9|SYR_HALOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219992975|gb|ACL69578.1| arginyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 566

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 140/565 (24%), Positives = 252/565 (44%), Gaps = 92/565 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE I ++I+ +     V   G  ++N +++   +   +L  I+  G  YG   IGK
Sbjct: 54  PNIIAEEIASKIEGNSYFSKVVNTGP-YVNFFINKEIFAETVLEEILQKGKYYGARNIGK 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +EF S N   P H+GH R  V+G  L ++  F GY      ++ D G Q   L +
Sbjct: 113 GKNVIVEFSSPNIAKPFHIGHIRTTVIGHALRNIYNFLGYNAIAINHLGDYGTQFGKLIV 172

Query: 180 SVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK---WLPIVKD 235
           ++  W  +  + +N   +PE  +  +Y+K    E A+K + EL    EEK   W   +++
Sbjct: 173 ALNKWGDKDKIKSN--PIPE--FLKLYIKF--HEEAEK-NPEL----EEKARSWFNRLEN 221

Query: 236 YSVQAM--MKIIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEG 289
              +AM   K IR+  LK     +D+   + D + G+      + D+I+ +  +G + E 
Sbjct: 222 KDEEAMDLWKWIRNMSLKEFKRVYDMLGIDFDSYAGESFYSDMMPDVIEEMEEKGLLQE- 280

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYE 346
                 S+  +  D++   +     M+         KSDGS  Y   D+A   Y K  Y 
Sbjct: 281 ------SQGAKIVDLEEYNM--PPAMIE--------KSDGSTLYITRDIAAAIYRKKTY- 323

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             F   IYV+GS    +  +   +   +  + A+  + +   +    DG    MS R G 
Sbjct: 324 -NFYKNIYVVGSQQKLHFDQWFKIIELMGHEWARDCIHVPFGMVSLEDGT---MSTRKGR 379

Query: 407 FITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
            + L  V+++                         VG  +V F  L+  NS + D+ F  
Sbjct: 380 VVFLEDVLNKAIEKTKETIEDKNPDLENKEEVAKIVGIGAVIFQELY--NSRIKDYVFSW 437

Query: 442 VKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +  S E     YVQY Y R +S+  ++   F  LD      +++  E  F+  +L    
Sbjct: 438 DRTLSFEGETGPYVQYTYVRTKSVLNKSNYKFKKLD----DYSLLTDEDAFNVIKL---- 489

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            ++++P  I  A+   EP  +  ++ +LA  F+ ++   +       +  +++K+   RL
Sbjct: 490 -ISQFPDTIIKASERYEPSIITRHITELAKAFNKYYHDNQ-------ILVDDQKVREARL 541

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            LV+AV +++ +GL+++G+++P +M
Sbjct: 542 FLVYAVNTVLKTGLSLLGIKTPEKM 566


>gi|282899871|ref|ZP_06307832.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195141|gb|EFA70077.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii
           CS-505]
          Length = 585

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 239/586 (40%), Gaps = 93/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG+ P  IA  IV  + +    +   IAG GFINL L  SYL   L
Sbjct: 40  GDFQANVALSLSKKLGMQPRAIATSIVEELDVSDMCEVPEIAGPGFINLKLQTSYLESQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++I       G   + +  K  ++F S N    MHVGH R  ++GD +A ++ F G++V 
Sbjct: 100 NAIKTDP-RLGVTRVDQPEKQIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   +   Y QAL      N  DL   Y          ++   ++ 
Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPQALTTANVLNIGDLVSFY----------RQAKQRFD 208

Query: 219 SELLNFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           ++  +F E     +VK         ++ + +    R + + +    DI I E    RG+ 
Sbjct: 209 AD-ASFQERARQEVVKLQAGAEDTTHAWKLLCAQSRKEFQTIYDLLDIKIIE----RGES 263

Query: 271 --SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
             +P +  I+ +L   G V E            KC      L   +   G+ +   + KS
Sbjct: 264 FYNPFLSKIVKDLETAGLVEE--------NQGAKCVF----LEGFTNREGEALPLIVQKS 311

Query: 328 DGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG Y Y   DLA    +  E     +IYV  +  + +  +   VA       A + ++  
Sbjct: 312 DGGYNYATTDLAALLYRIREDQAKRIIYVTDAGQANHFAQFFQVAQKAGWIPADVELVHI 371

Query: 387 EL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
              + L  DG   K   R+GD + L+ ++DE                             
Sbjct: 372 PFGLVLGEDGK--KFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIQNVA 429

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +  +    F + K+    K N   Y+ YAY R + I R+ K  F +
Sbjct: 430 QTVGISAVKYADLSQNRTSSYVFSYDKMLS-LKGNTAPYMLYAYVRTQGISREGKIDFEN 488

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L  D     +I QE     +EL L  +L +   ++        P +L  YLY+L+  F+ 
Sbjct: 489 LAPDA---KIILQEE----TELALAKNLLQLDEILYQVEQDLLPNRLCDYLYNLSEKFNK 541

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            +       R   ++A +  +   RL L +  A  +  GLN++G++
Sbjct: 542 FYD------RCPVLKAED-PIRTSRLMLCYLTAKTLRLGLNLLGIK 580


>gi|294783524|ref|ZP_06748848.1| arginine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294480402|gb|EFG28179.1| arginine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 569

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 251/574 (43%), Gaps = 74/574 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I A+      V+ + +AG GFIN++L+  YL   +
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTDKYLSDSI 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I   G  Y  + + +  KV I+F S N    MH+GH R  ++G+++A +M + GY+V 
Sbjct: 99  KKI---GEAYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +E     S E 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVK-FSEEAEKDPSLED 210

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L   E K +   ++ + +   + I + LK  N  ++      D + G+ S   D++ ++ 
Sbjct: 211 LARAELKKVQDGEEENTKLWKEFITESLKEYNKLYERLDVHFDTYYGE-SFYNDMMADVV 269

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++    +  +    +K       D K  LF            + K DG+Y Y  +D+A  
Sbjct: 270 KELEEKKLAVDDDGAKVVF---FDEKDNLFPCI---------VQKKDGAYLYSTSDIATV 317

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K + +    + MIY+  +    + K+   +   +     + ++    ++R + DG+   +
Sbjct: 318 KFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHIWFG-IIR-FADGI---L 372

Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433
           S R G+ I L  ++DE                           VG  SV++  L +    
Sbjct: 373 STRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQS 432

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            + F++ K+    + N   Y+ Y YAR +SI R+      + + +L     I  E++ + 
Sbjct: 433 DILFEWDKML-SFEGNTAPYLLYTYARIQSILRK----IDEQNIELNDSVEIKIENKIER 487

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           S   L  HL  +P  +  A    +P  +A YLYDL+   +  +++    P L      N+
Sbjct: 488 S---LATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNC---PIL------NQ 535

Query: 554 KLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +  R  L+     ++  GL+++G+   N+M
Sbjct: 536 DIDTLKSRALLIKKTGEVLKEGLSLLGIPVLNKM 569


>gi|304440484|ref|ZP_07400371.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370962|gb|EFM24581.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 569

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 128/568 (22%), Positives = 249/568 (43%), Gaps = 79/568 (13%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++    +P  IAE + A IK +   + V   G  +IN + +   L K ++  I      
Sbjct: 46  LAKIFRKNPNMIAEEMAASIKSEY-FEKVENKG-AYINFFTNKEVLAKTVVEEISKEKEN 103

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG++ +G+G  V +E+ S N   P H+GH R  ++GD+L  +  F GY V    ++ D G
Sbjct: 104 YGKSKLGEGKTVIVEYSSPNIAKPFHIGHIRSTIIGDSLKRIHKFLGYNVVSINHLGDYG 163

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q   L  ++        + N  ++ +   P +   +V        + E+       +  
Sbjct: 164 TQFGMLIYAI------KNWGNIEEIEKNPIPELLKLYVRVNTEADQNEEIKEECRHYFAS 217

Query: 232 IVK-DYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           + K D     +   IR+  LK  NI +D+   + D + G+      ++  + R   +  G
Sbjct: 218 LEKGDEDAVKIWTWIREISLKEFNIVYDLLGIKFDSYNGESFYSDKMMKQVERMEKL--G 275

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE 346
           IL    S+  +  D+++  L             P   +LKSDGS  Y   D+A  + ++E
Sbjct: 276 ILKD--SEGAKIVDLEKYNL-------------PPALILKSDGSTIYITRDIAAAEYRHE 320

Query: 347 RGF-DNMIYVMGSDHSGYVKRLEAVA-----------------------AAVSEKKAQIN 382
               +  IYV+ ++ + + K+L+AV                          +S ++ ++ 
Sbjct: 321 TYHPEKNIYVVATEQNLHFKQLKAVLKEMQYDWYDEVTHVAFGMINLADGKLSTRQGRVV 380

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            L+  L +     M I   +     + +     +  +VG  +++F  L+ +  +   FD+
Sbjct: 381 YLIDVLNKAIEKIMEILNEREETSGVKIANKEELAKQVGIGAIKFQELFNQRIKDYTFDW 440

Query: 440 CKVKE-QSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            K    + +  P  YVQYA+AR C  + +   DI  ++D  L    +          E+ 
Sbjct: 441 DKTLSFEGESGP--YVQYAHARICSLLEKGGFDINKEVDSSLLNNEM----------EIN 488

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           ++ +L ++  V+E+A    EP+ ++ Y+ +LA  F+ +++          +   + KL  
Sbjct: 489 ILRNLYKFTEVVEDAKEKYEPFFISRYVVELAKDFNKYYNQVT-------INVEDEKLKN 541

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L ++V ++I+ GL ++G+E+P +M
Sbjct: 542 TRLMLCYSVKNVISEGLRLLGIEAPEKM 569


>gi|332238981|ref|XP_003268683.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Nomascus
           leucogenys]
          Length = 660

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 250/598 (41%), Gaps = 103/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G+      +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVRLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G Q   L                    L +F++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQLFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q   KI  D L    I+   
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKIY-DTLDISLIERGE 335

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
              +D  +        DI+     +G+V              + D D ++++F   + G 
Sbjct: 336 SFYQDRMY--------DIVKEFEDRGFV--------------QLD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374
            +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A A  +   
Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429

Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408
                            E K +      E VRL     +G+   M K   +  D +    
Sbjct: 430 DPKVTPVFLAGFGVVLGEDKKKFKTRSGETVRLVDLLGEGLKRSMDKLKEKERDKVLTAE 489

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      +    +++  L         F F K+ +  K N   Y+ YA+ R RSI R A
Sbjct: 490 ELNAAQTSIAYGCIKYADLSHNRLNDYVFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA 548

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+
Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|257058437|ref|YP_003136325.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588603|gb|ACU99489.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 585

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 247/584 (42%), Gaps = 91/584 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ L++ LG  P  IA+ I+  + ++   +   IAG GFIN+ + P+YL   L
Sbjct: 40  GDYQANIALSLAKKLGEQPRAIAQKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +  +    G        K+ ++F S N    MHVGH R  ++GD +A ++   G++V 
Sbjct: 100 K-VQQNSSSLGVTKADPIEKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   D+ L  G     Y +      A K   E  
Sbjct: 159 RLNHVGDWGTQFGMLIAYLAEVYPDALTTADA-LDIGDLVTFYKQ------AKKRFDEDE 211

Query: 223 NFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272
            F E     +VK         ++ Q + +  R + + +    DI I+E    RG+   +P
Sbjct: 212 KFQETARNQVVKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITE----RGESFYNP 267

Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + DI+  L  QG +        K     +C      L   +   GD +   + KSDG Y
Sbjct: 268 LLEDIVKELDHQGLL--------KKDAGAQCVF----LDGFTNKSGDPLPLIVQKSDGGY 315

Query: 332 TYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCEL 388
            Y   DLA  K +  +   + +IYV  +  + +  ++  VA  A +  K  +I  +   L
Sbjct: 316 NYATTDLAALKYRITQDQAERIIYVTDAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGL 375

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------V 417
           V+   DG   K+  R+G  I LR ++DE                               V
Sbjct: 376 VK-GEDGK--KLKTRSGTTIKLRDLLDEAVIYARQDLEKRLAEEGRQESEDFIANVSQVV 432

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L +  +    F + K+    + N   Y+ YAYAR +SI R+      ++DF
Sbjct: 433 GISAVKYADLSQNRTSDYIFSYDKMLA-LQGNTAPYMLYAYARIQSISREG-----NIDF 486

Query: 478 DLFPR--NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +   +   +I QE     +E++L  +L +   VIE       P +L  YLY+L+  F+  
Sbjct: 487 ESLQQEAKIILQEE----TEIELGKYLLQLSEVIEEVEKTLLPNRLCDYLYELSKKFNRF 542

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +    P L+    +   L   RL L    A  +  GL+++G+
Sbjct: 543 YENC---PVLK----SEEPLRTSRLLLCDLTARTLKLGLSLLGI 579


>gi|296192722|ref|XP_002744196.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 660

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 260/590 (44%), Gaps = 87/590 (14%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++   IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNTREIAENITKHLPDNEYIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTNLLVNGVKLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +   SDL + +Y     +   +E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPISDL-QAFYKESKKRFDTEEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R +   +    D+ + E    RG+      
Sbjct: 288 KRAYQCVVLLQGKNPDIIKAWNL--ICDVSRQEFNKIYEALDVTLVE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + D++     +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 342 MNDVVKEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374
           Y  +DLA  K + +E   D +IYV+ S  S + + + A A  +                 
Sbjct: 384 YDTSDLAAIKQRLFEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKVTRVSHAGFGV 443

Query: 375 --SEKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFITLRHVVD----EVGSDSV 422
              E K +      E VRL     +G+   M K   +  D +     +D     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKQRDKVLTAEELDAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D ++  +
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQK 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW----- 536
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 537 -SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R+  ++        K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 618 VEKDRQTGKI-------LKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|56403814|emb|CAI29693.1| hypothetical protein [Pongo abelii]
          Length = 659

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/597 (23%), Positives = 251/597 (42%), Gaps = 102/597 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  +I D G Q   L                    L  F++  +  ++ + +  +
Sbjct: 229 GYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V L   GK           N    K   ++ D S Q + KI      AL++   +
Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + F++     + DI+     +G+V              + D D ++++F   + G 
Sbjct: 331 IERGESFYQ---DMMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
            +   +LKSDG YTY  +DLA  K +       +IYV+ +  S + + + A A  +    
Sbjct: 370 SIPLTILKSDGGYTYDTSDLAAIKQRLFEEKAMIIYVVDNGQSVHFQTIFAAAQMIGWYD 429

Query: 375 ---------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI----T 409
                           E K +      E VRL     +G+   M K   +  D +     
Sbjct: 430 PKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEE 489

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           L      +    V++  L         F F K+ +  K N   Y+ YA+ R RSI R A 
Sbjct: 490 LNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA- 547

Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+L
Sbjct: 548 ----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYEL 603

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 604 ATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 659


>gi|332971551|gb|EGK10501.1| arginine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 568

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 134/591 (22%), Positives = 245/591 (41%), Gaps = 94/591 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  +D  HG    N  M  ++  G +P  +A+ +   +     + S  +AG GFINL
Sbjct: 25  IVLQPAKDAKHGDFQINGVMGAAKKAGQNPRELAQKVADELHGKGAIASAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+  +L + L+S  ++ IE   N       V I++ S N    MHVGH R +++GD+LA
Sbjct: 85  RLAADFLAENLNSGSLN-IEKTPN----PQTVVIDYSSPNLAKEMHVGHLRSSIIGDSLA 139

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207
            ++AF G+ V R+ ++ D G Q   L   +  + Q       +DL E +Y    ++    
Sbjct: 140 RVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQDNAEFKLADL-EQFYRNAKVRFDED 198

Query: 208 HVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
               +LA +Y  +L           ++++ I   ++     K+       L +Q      
Sbjct: 199 AAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKL------GLKLQRADVAG 252

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++      ++++ID L  +G   E                D  +++F       D +
Sbjct: 253 ESSYN----DDLQNVIDELTAKGLAVES---------------DGAKVVFLDEFKNKDGE 293

Query: 322 RPLL---KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
                  K  G + Y   D A  + +  + G + ++YV+ +    + K+L + +      
Sbjct: 294 PAAFIVQKQGGGFLYATTDFACMRYRVGKLGANRLMYVVDTRQDLHFKQLFSASRKAGWL 353

Query: 378 KAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
              ++         + +DG P K   R+GD + L  ++DE                    
Sbjct: 354 PENVSAEFIGFGTMMGKDGKPFKT--RSGDTVKLVDLLDEAVERATALVREKNADLSAEE 411

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+F++A 
Sbjct: 412 VAQIGEVVGIGAVKYADLSKNRTSDYVFDWDNMLS-FEGNTAPYLQYAYTRVQSVFKKAG 470

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +            NV          E QL V L ++  V+ +      P+ LA YLY LA
Sbjct: 471 EW-----------NVQAALKLEQPLEQQLAVELLKFEDVVASVAETSYPHYLAAYLYQLA 519

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           ++F   +      P L+  Q + R     RL+L    A  + +GL+++G++
Sbjct: 520 TLFSRFY---EACPILK-AQGDVRD---SRLKLAKLTAETMKTGLDLLGID 563


>gi|56808424|ref|ZP_00366172.1| COG0018: Arginyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 492

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/535 (23%), Positives = 231/535 (43%), Gaps = 86/535 (16%)

Query: 88  FINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN +L    +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+
Sbjct: 7   YINFFLDKVKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVI 66

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVY 205
           GD+LA++ A  GY+  +  ++ D G Q   L ++   W  + A+  +  D     Y  + 
Sbjct: 67  GDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRIN 126

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISE 262
            +       D+ + E        W   ++D   +A  + +  RD+ L   N  +D     
Sbjct: 127 AEAEIDPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVT 178

Query: 263 DDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            D + G+      + +++D L  +  + E       SK  Q  ++++             
Sbjct: 179 FDSYNGEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------G 220

Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---- 370
           ++ P L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ + + K+L+AV    
Sbjct: 221 IEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEM 278

Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                               A +S +K  + +LL   V    +    ++  +  +     
Sbjct: 279 GYDWSDDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKE 337

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
            V   VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A  
Sbjct: 338 AVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD- 394

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                    F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA 
Sbjct: 395 ---------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQ 445

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+ +++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 446 SFNKYYAH------TRILDDNSERDN--RLVLCYATATVLKEALRLLGVDAPNEM 492


>gi|12847471|dbj|BAB27583.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 138/584 (23%), Positives = 257/584 (44%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S +V+G++    ++G   KV ++F S N    MHV H R  ++G++++ L  F+
Sbjct: 171 VSEQLTSHLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVVHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +    E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R++ K +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++DI+     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374
           Y  +DLA  K + +E   + +IYV+ +  + + + + A A  +                 
Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443

Query: 375 --SEKKAQINVLLCELVRLY---RDGMPI---KMSKRAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VRL     +G+     K+ ++  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSLDKLKEKERDKVLTEEELKAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  R
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660


>gi|312978134|ref|ZP_07789879.1| arginine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895109|gb|EFQ44178.1| arginine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 561

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 253/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  ++   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-NFANIQAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG   IG+G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPVKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261
               + + EL N   E W   ++D   +A+          +K  +   K L +  D +  
Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F+      ++ +ID L  +G ++E       S+  Q  DM   +             
Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289

Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370
            P  ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V        
Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349

Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                             +S +K  + V L ++++        ++ ++  D      V  
Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408

Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A  + 
Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464

Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +           P E++    D     +   LA++PR++  +    EP  +A +  DLA
Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 514 KKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561


>gi|218752997|ref|ZP_03531793.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 184

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 3/162 (1%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L ++V +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A  L  A  K+D  + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G K
Sbjct: 64  LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           VN+EFVSANPTGP+H+G  R A VGD L  L+   G +V RE
Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVRE 164


>gi|296875585|ref|ZP_06899656.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433382|gb|EFH19158.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 562

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 148/605 (24%), Positives = 248/605 (40%), Gaps = 120/605 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KID       +A   ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDQSAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  +++ S++ +G +YG+   G G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSKISDQVIKSVIEAGADYGQQDEGHGQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D               
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187

Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            EL   Y   ++E+ N PE      KW   ++D   +A  + +  RD+ L   N  + + 
Sbjct: 188 -ELLKLYVRINAEIENDPELDEEGRKWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLL 246

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E D   G+ +   D +D    Q    +G+L   K  +  + D               D
Sbjct: 247 GVEFDSLNGE-AFYNDKMDE-GVQILEDKGLLKESKGASIVELD---------------D 289

Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           V+ P   + KSDG+  Y   D+A   Y    Y   F   IY +G + S + ++L+AV   
Sbjct: 290 VNLPPAMIKKSDGATLYITRDIATAMYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKK 347

Query: 374 V----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           +    S+    ++  L    R        K+S R G+ I L   + E             
Sbjct: 348 MGFDWSDDMVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKN 400

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRS 463
                       VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +S
Sbjct: 401 PELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQS 458

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A           F  +     S  D    ++I  L ++ RV++ A    +P  +A 
Sbjct: 459 ILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFSRVVKRAAENYDPSLIAK 508

Query: 524 YLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           Y  +LA  F+ +++H R   E+P               RL L ++ A ++   L ++GV+
Sbjct: 509 YAINLAQAFNKYYAHTRILDESPERE-----------SRLALSYSTAVVLKEALRLLGVD 557

Query: 581 SPNEM 585
           +P +M
Sbjct: 558 APEKM 562


>gi|315038946|ref|YP_004032514.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325957356|ref|YP_004292768.1| arginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312277079|gb|ADQ59719.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325333921|gb|ADZ07829.1| arginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184081|gb|AEA32528.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 561

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 255/599 (42%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ +  +P  IA+ I   +  D D  S+   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTMHKNPAIIAKDIAENLSSD-DFASIQAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG   +G+G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDVLAEKEHYGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMSLFHYYV-- 192

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRD----DLK----ALNIQH 256
               ++  E  + PE      +W   ++D   +A  + K  R+    D K     L +  
Sbjct: 193 ----RFHKEAEDNPELDDEGREWFKKLEDGDPEAVRLWKWFREVSLKDFKRIYNELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SQGAQVVDMGP---------- 287

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V     
Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 347 YDWADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLANQDQ 405

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A 
Sbjct: 406 VAHDVGVGAVVFHDL--KNDRLDNFDFNLEEVVRFEGDTGP--YVQYTNARAQSVLRKAA 461

Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +              P +++    D     +   LA++PR++  A+   EP  +A Y  
Sbjct: 462 AMGEK-----------PSDTDLALNDDWAFAVAKDLADFPRIVARASEKFEPSVIAKYSL 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561


>gi|16081423|ref|NP_393761.1| arginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|39932237|sp|Q9HLE7|SYR_THEAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|10639424|emb|CAC11426.1| arginine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 546

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 134/580 (23%), Positives = 250/580 (43%), Gaps = 96/580 (16%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY- 97
           D  H  ++     IL  P G +   +   IV  I     V+     G G+IN+++  +Y 
Sbjct: 30  DTGHSDITIRVFRILKSPDGGENAVME--IVRSISEKDYVEKALSEG-GYINVWIKRTYM 86

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           LR++L SI  SG     ++  +  +V++E  SANPTGP+H+G  R +++GD++  +++  
Sbjct: 87  LREVLESIEKSGTY--PDVFQEAERVSVEHTSANPTGPLHIGRARNSIIGDSIYRILSRY 144

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-----KHVGKE 212
           GY   R+Y++ND+G Q+ +L  + + +Y   +     +L E  Y  +Y      + + KE
Sbjct: 145 GYRTVRQYFVNDSGKQMISL-YTAYIKYGGPI--TIENLLEN-YQKIYREMEKDQSIEKE 200

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           + +K      N   E +  + K   V  M+  I   LK + I+ D F  E D        
Sbjct: 201 I-EKNIERYENADPEVFGTLRKIAGV--MLDGIASTLKRIGIEFDEFDWESDLLLN--GS 255

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +R  ID           +L   +  + +  ++  K++              L + DG+  
Sbjct: 256 VRKAID-----------MLETKEEDSARYIEISGKKVF-------------LTRKDGTTL 291

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA D+AY   K E   + +I V+G DH  + K L  V   + + + +++ +    + L 
Sbjct: 292 YFARDIAYHLFKAENS-EWIIDVLGEDHKDHAKSLNHVLKEMLKLENRVSFMYYSFITLE 350

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425
                 KMS R G+ +TL+ +VD                            + S +VR+ 
Sbjct: 351 TG----KMSTRRGNIVTLQDLVDRTYDEALKIVNEKRPDLSEEERKKIAEVIASSAVRYS 406

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ++     + + F + +     + N   ++ Y++AR  SI  +A +       D+      
Sbjct: 407 IIRVSAPKPITFRWEEAL-NFESNSAPFIMYSHARAASILDKAPEPEQSYGMDM------ 459

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           P+E      E  L+  +  YP  +++A    +P  +A YL  L   F+  +   R     
Sbjct: 460 PKE------EADLVKAMYVYPYYLKDAAQDLKPDLIAAYLISLVQKFNDFYGACR----- 508

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V   +      R+++V A   I++   ++IG++  ++M
Sbjct: 509 --VIGTDPLTYARRIRIVKAYKQILSDAGDLIGIKMLDQM 546


>gi|293395793|ref|ZP_06640075.1| arginine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421730|gb|EFE94977.1| arginine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 576

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/587 (22%), Positives = 247/587 (42%), Gaps = 91/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  + +      V IAG GFIN++L+P+++ +  
Sbjct: 37  GDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDIATKVEIAGPGFINIFLTPAWVAQ-H 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +   +   + G   +   T V I++ + N    MHVGH R  ++GD  A    F G++V 
Sbjct: 96  ADAALRAPKLGIAPVEPQTIV-IDYSAPNVAKEMHVGHVRSTIIGDAAARTQEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216
           R  ++ D G Q   L       Y + + N +      SDL + Y             A K
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASEMGLSDLEQFYRE-----------AKK 198

Query: 217 YSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQH---DIFISEDDFHRG 268
           +  E   F E     +VK      Y +    K++   +    + +   ++ ++EDD   G
Sbjct: 199 HYDEDAQFAERARGYVVKLQGGDQYCLGMWRKLVNITMAQNQLVYNRLNVTLTEDDV-MG 257

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +    + +  I+++L  +G   E       S+      +D  +        G+ +   + 
Sbjct: 258 ESLYNAMLPGIVEDLKAKGLAVE-------SEGATVVFLDEYK-----NKDGEPMGVIIQ 305

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEK 377
           K DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +VS +
Sbjct: 306 KKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLE 365

Query: 378 KAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVG 418
                ++L +  + +  R G  IK+S       +RA   I           L  VV+ VG
Sbjct: 366 HHMFGMMLGKDGKPFKTRSGGTIKLSDLLDEAIERAAKLIAEKNPDMPADELNKVVNAVG 425

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+F++A      +D +
Sbjct: 426 IGAVKYADLSKSRTTDYIFDWDNML-SFEGNTAPYMQYAYTRVASVFKRA-----GVDEN 479

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                ++  E      E+ L   L ++   +        P+ +  YLYD+A +F   + H
Sbjct: 480 ALTLPLVMTEER----EIALATRLLQFEETLTVVAREGTPHVMCSYLYDVAGLFSSFYEH 535

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A++      RL+L    A  + +GL+ +G+++   M
Sbjct: 536 ------CQILNADSEAARQSRLKLALLTAKTLKTGLDTLGIDTVERM 576


>gi|239997007|ref|ZP_04717531.1| arginyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 576

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 145/582 (24%), Positives = 237/582 (40%), Gaps = 80/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L   P  IAE IV  +K+D     + +AG GFIN++L+  +L    
Sbjct: 36  GEYQFNGAMALAKQLKQKPRDIAEKIVETVKLDDIASKLEVAGPGFINVHLNDEWL---- 91

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           S+     +   R  I K  + NI  ++ S N    MHVGH R  ++GD +  ++ F G+ 
Sbjct: 92  SNQCELSLTDPRLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHN 151

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R+ ++ D G Q   L   +  + Q  +                      +L D Y   
Sbjct: 152 VIRQNHMGDWGTQFGMLLAHLSDKLQDEVAET----------------ALSDLEDFYREA 195

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFI--SEDDFHRGDPSPIRD 275
            + F EE+      D + + ++K+   D + L +     D+ I  SE+ + + + S  R 
Sbjct: 196 KVRFDEEEGFA---DRAREYVVKLQGGDAQCLALWEKFIDVSIAHSEEVYDKLNVSLTRK 252

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----KSDGSY 331
            I   +        ++   K+K     D    Q++F   +  D    P +    KS G Y
Sbjct: 253 DIMGESAYNDDLANVISDLKAKGLAVEDQG-AQVVFIPEL-ADKEGNPAVYIVQKSGGGY 310

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-V 389
            Y   DLA  + +  +   D  + +  +  + + K+ E V       K +     C   +
Sbjct: 311 LYATTDLAAMRYRSGKLNADRTLILTDARQALHFKQTEIVGRKAGFMKEEQTYEHCPFGM 370

Query: 390 RLYRDGMPIKMS---------------KRAGDFIT----------LRHVVDEVGSDSVRF 424
            L  DG P K                 +RAG  I           L+ V  +VG  +V++
Sbjct: 371 MLGSDGKPFKTRTGGTVKLVELLDEAVERAGKLIAERDNDLSEDELKEVAHKVGIGAVKY 430

Query: 425 MMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
             L +  +   D+ F      S E N   Y+QYAY R +S+FR+A      +D    P +
Sbjct: 431 ADLSKNRT--TDYMFNWDSMLSFEGNTAPYLQYAYTRVKSLFRKA-----GVDMATMPVD 483

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +   E +    E  L V L ++  VI   +    P+ L  YLYD+AS F   +      P
Sbjct: 484 INIAEKQ----EHALAVLLMQFEEVIGTVSREATPHVLCTYLYDVASAFMSFY---EACP 536

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L+        +   RL L   VA  +  GL ++G+E+  +M
Sbjct: 537 MLK--DGIEPAVRDSRLALSALVAKTLEQGLTLLGIETLEKM 576


>gi|114045966|ref|YP_736516.1| arginyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123131795|sp|Q0HZJ6|SYR_SHESR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113887408|gb|ABI41459.1| arginyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 581

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 146/597 (24%), Positives = 244/597 (40%), Gaps = 86/597 (14%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQLIIDNLPASAYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  S L   L +  +S    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDSALANQLQA-AISDEHLGIKLPTPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYI--------------------NDAGAQINTLALSVFWRYQQALY 190
              + F G++V R+ ++                    N   AQ+    L  F+R  +  +
Sbjct: 147 VRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKLRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---------- 240
           +  ++        V     G E  +K   E  +        + +   V            
Sbjct: 207 DESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGESA 266

Query: 241 ----MMKIIRD-DLKALNIQHD----IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               + ++++D D + L  Q +    +F  E     G+  P+   I   A  GY+Y    
Sbjct: 267 YNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPV---IIQKADGGYLY---- 319

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 TT    M  +  + ++  V   VD R  L     ++   A LA F  + +   +
Sbjct: 320 -----ATTDLAAMRYRSSVLKADRVLYFVDLRQALHFQQVFSL--AKLAKF-VRNDMSLE 371

Query: 351 NMIY--VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           ++ +  + G D   +  R   V   V +   + N    ELVR     M         D  
Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLV-DLLDEANTRALELVRSKNPDM---------DEA 421

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TL  +   VG  +V++  L +  +    F F ++    + N   Y+ YAY R   IF++A
Sbjct: 422 TLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIFKRA 480

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            DI  DL      + V+  E E D         LA++  ++       +P+ L  YLY+L
Sbjct: 481 TDI--DLSQ---AKIVLEHEKEKDLGN-----KLAQFGEILSRVVDKGQPHVLCGYLYEL 530

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F   +      P L    A+N +    RL L    A+ +  GLN++G+E+   M
Sbjct: 531 AGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581


>gi|332140679|ref|YP_004426417.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693246|sp|B4RU34|SYR_ALTMD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|327550701|gb|AEA97419.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 576

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 144/582 (24%), Positives = 241/582 (41%), Gaps = 80/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L   P  IAE IV  +K+D     + +AG GFIN++L+ ++L    
Sbjct: 36  GEYQFNGAMALAKQLKQKPRDIAEKIVETVKLDDIASKLEVAGPGFINVHLNDAWLAN-Q 94

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
             + ++    G   I K  + NI  ++ S N    MHVGH R  ++GD +  ++ F G+ 
Sbjct: 95  CELSLTDPRLG---IAKSPEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHN 151

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R+ ++ D G Q   L   +  + Q+ +                      +L D Y   
Sbjct: 152 VIRQNHMGDWGTQFGMLLAHLSDKLQEEVAET----------------ALSDLEDFYREA 195

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFI--SEDDFHRGDPSPIRD 275
            + F EE+      D + + ++K+   D + L +     D+ I  SE+ + + + S  R 
Sbjct: 196 KVRFDEEEGFA---DRAREYVVKLQGGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRK 252

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----KSDGSY 331
            I   +        ++   K+K     D    Q++F   +  D    P +    KS G Y
Sbjct: 253 DIMGESAYNDDLANVISDLKTKGLAVEDQG-AQVVFIPEL-ADKEGNPAVYIVQKSGGGY 310

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-V 389
            Y   DLA  + +  +   D  + +  +  + + K+ E V       K +     C   +
Sbjct: 311 LYATTDLAAMRYRSGKLNADRTLILTDARQALHFKQTEIVGRKAGFMKEEQTYEHCPFGM 370

Query: 390 RLYRDGMPIKMS---------------KRAGDFIT----------LRHVVDEVGSDSVRF 424
            L  DG P K                 +RAG  I           L+ V  +VG  +V++
Sbjct: 371 MLGSDGKPFKTRTGGTVKLVELLDEAVERAGKLIAERDNDLSEEELKEVARKVGIGAVKY 430

Query: 425 MMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
             L +  +   D+ F      S E N   Y+QYAY R +S+FR+A      +D    P +
Sbjct: 431 ADLSKNRT--TDYMFNWDSMLSFEGNTAPYLQYAYTRVKSLFRKA-----GVDMATMPVD 483

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +   E +    E  L V L ++  VI   +    P+ L  YLYD+AS F   +      P
Sbjct: 484 IKLVEKQ----EHALAVLLMQFEEVIGMVSREATPHVLCTYLYDVASAFMTFY---EACP 536

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L+  +    ++   RL L   VA  +  GL ++G+E+  +M
Sbjct: 537 MLK--EGIEPQVRDSRLALSALVAKTLEKGLTLLGIETLEKM 576


>gi|151942316|gb|EDN60672.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|323334169|gb|EGA75553.1| YDR341C-like protein [Saccharomyces cerevisiae AWRI796]
          Length = 607

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 226/545 (41%), Gaps = 93/545 (17%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FI  + +P +L K ++  I+    +YG   + +  KV IEF S N   P H GH R  ++
Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  LA+L    G+EV R  Y+ D G Q   LA+  F RY  ++AL  +    P  +   V
Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223

Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y++ + K++ ++  S               + +   +E+ L I K +   ++ K I D  
Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             LNI++D++  E    +     +   ID    +G  +E                D+  +
Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322

Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
           L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV+ S    H+   
Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     + K L+ V       +S +K  + V L  ++   ++ M   M K    + 
Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441

Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            + H   V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R RS+
Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499

Query: 465 FRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R A  I  D     DF L            + +   LI  L +YP V+ NA    EP  
Sbjct: 500 ERNASGITQDKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ L       +        + +V     +L   RL L  A   ++ +G+ ++G+ 
Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602

Query: 581 SPNEM 585
               M
Sbjct: 603 PVERM 607


>gi|262066244|ref|ZP_06025856.1| arginine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380057|gb|EFE87575.1| arginine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 569

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 251/574 (43%), Gaps = 74/574 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I A+      V+ + +AG GFIN++L+  Y+   +
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTSKYISDSI 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I   G  Y  + + +  KV I+F S N    MH+GH R  ++G+++A +M + GY+V 
Sbjct: 99  KKI---GEAYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +E     S E 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVK-FSEEAEKDPSLED 210

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L   E K +   ++ + +   + I + LK  N  ++      D + G+ S   D++ ++ 
Sbjct: 211 LARAELKKVQDGEEENTKLWKEFITESLKEYNKLYERLDVHFDTYYGE-SFYNDMMADVV 269

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++    +  +    +K       D K  LF            + K DG+Y Y  +D+A  
Sbjct: 270 KELEEKKLAVDDDGAKVVF---FDEKDNLFPCI---------VQKKDGAYLYSTSDIATV 317

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K + +    + MIY+  +    + K+   +   +     + ++    ++R + DG+   +
Sbjct: 318 KFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHIWFG-IIR-FADGI---L 372

Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433
           S R G+ I L  ++DE                           VG  SV++  L +    
Sbjct: 373 STRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQS 432

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            + F++ K+    + N   Y+ Y YAR +SI R+      + + +L     I  E++ + 
Sbjct: 433 DILFEWDKML-SFEGNTAPYLLYTYARIQSILRKV----AEQNIELNDSVEIKIENKIER 487

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           S   L  HL  +P  +  A    +P  +A YLYDL+   +  +++    P L      N+
Sbjct: 488 S---LATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNC---PIL------NQ 535

Query: 554 KLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +  R  L+     ++  GL+++G+   N+M
Sbjct: 536 DIDTLKSRAFLIKKTGEVLKEGLSLLGIPVLNKM 569


>gi|242239601|ref|YP_002987782.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131658|gb|ACS85960.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 576

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 142/603 (23%), Positives = 238/603 (39%), Gaps = 123/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE +V  +++D       IAG GFIN++L   +L   L
Sbjct: 37  GDYQANGIMAVAKKLGMPPRQLAEQVVQLLQLDGIAAKTEIAGPGFINIFLDRQWLSAQL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +S  + G   +   T V I++ + N    MHVGH R  ++GD     +AF G++V 
Sbjct: 97  EH-ALSAPKLGIAGVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAVRTLAFLGHKVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D+   E    G 
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKVQNEHAGDLELSDLEAFYREAKKHYDDDAAFAE-RARGY 213

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHD 257
            +K  G    D+Y   L       W  +V     Q         + + +DD+   ++ +D
Sbjct: 214 VVKLQG---GDEYCRTL-------WRRLVDITMSQNQRNYDRLNVTLTKDDVMGESLYND 263

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +           P     I+ +L  +G   E       S+      ++     FR+   G
Sbjct: 264 ML----------PG----IVADLKAKGLAVE-------SEGATVVYLEE----FRNKE-G 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHS------GYVKRLEA 369
           + +   + K DG Y Y   D+A  K +YE    N +  Y+    H         V++   
Sbjct: 298 EPMGVIIQKKDGGYLYTTTDIACAKYRYETLNANRVLYYIDSRQHQHLMQAWTIVRKAGY 357

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           V  AVS +     ++L       +DG P K   RAG  I L  ++DE             
Sbjct: 358 VPDAVSLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYDRALALIAEKN 409

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         V   +V++  L +  +    FD+  +    + N   Y+QYAY R  
Sbjct: 410 PQMARAELEQLAQVVSVGAVKYADLSKNRTTDYVFDWDNMLA-FEGNTAPYMQYAYTRVA 468

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF++A      +D     + +I      D  EL L   L ++   I        P+ + 
Sbjct: 469 SIFKRA-----GVDDGSLTQPIILD----DERELALATRLLQFEETITTVAREGTPHVMC 519

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YLYDLA +F   + H         + A++  +   RL+L    A  + +GL+ +G+++ 
Sbjct: 520 AYLYDLAGLFSSFYEH------CPILNADSDSVRQSRLKLAQLTAMTLKTGLDTLGIQTV 573

Query: 583 NEM 585
            +M
Sbjct: 574 EKM 576


>gi|327479212|gb|AEA82522.1| arginyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 579

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 242/584 (41%), Gaps = 97/584 (16%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           K +   I +E  +D +HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG
Sbjct: 24  KGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGMKPRELAEKLIAALPQDAQVSKVEIAG 83

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GF+N + +   L + L + +    +   +      +V I+  S N    MHVGH R  +
Sbjct: 84  PGFLNFFQNSDALAQRLETALADA-QLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTI 142

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +GD +  ++ F G EV R+ ++ D G Q   L L+       A  +  +DL + Y     
Sbjct: 143 IGDAVGRVLEFLGDEVIRQNHVGDWGTQFGML-LAYLEEKPAAAESELADLEQFYRAAKQ 201

Query: 206 LKHVGKELADKYSSEL---LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIF 259
                 E AD+ + EL   L   + + L +     D S+    KI  D L       D+ 
Sbjct: 202 RFDESPEFADR-ARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIY-DRLNVKLTPADV- 258

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++    + + DI++ L  +G + E           Q   +D     F++   G+ 
Sbjct: 259 KGESAYN----ADLADIVEALREKGLLTE-------DNGAQCVFLDE----FKNAE-GNP 302

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           +   + K+ G Y Y   DLA  + + ++   D ++Y        +V + +A+   ++ + 
Sbjct: 303 LPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLY--------FVDQRQALHFQMAFEV 354

Query: 379 AQINVLLCELVRLYR---------DGMPIKMSKRAGDFITLRHVVDE------------- 416
           A+    + E ++L           DG P K   R G  + L  ++DE             
Sbjct: 355 ARRAGFVHEGMQLEHMGFGTMNGADGRPFKT--RDGGTVKLIDLLDEAEQRAYALVKGKN 412

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         VG  +V++  L +  +    F+F ++    + N   Y+ YAY R  
Sbjct: 413 PELEEAELRQIARAVGISAVKYADLSKHRTSDYRFNF-ELMLSFEGNTAPYLLYAYTRVA 471

Query: 463 SIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYK 520
           S+FR+  K I           + I    + D   EL L   LA++  V+ +     EP+ 
Sbjct: 472 SVFRKLGKGI-----------DEISGHIQLDAEQELALAAKLAQFGEVLNSVGEKGEPHL 520

Query: 521 LAFYLYDLASVFHGHWSH---------GRENPRLRFVQANNRKL 555
           L  YLYDLA +F   + H          ++  RLR      R L
Sbjct: 521 LCAYLYDLAGLFSSFYEHCPILSAEQDAQKQSRLRLAALTGRTL 564


>gi|227876933|ref|ZP_03995029.1| arginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850176|ref|ZP_05555606.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|293379845|ref|ZP_06625967.1| arginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|295693485|ref|YP_003602095.1| arginyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|227863490|gb|EEJ70913.1| arginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256713148|gb|EEU28139.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|290923617|gb|EFE00498.1| arginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|295031591|emb|CBL51070.1| Arginyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 561

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 253/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  ++   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-NFANIQAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG   IG+G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261
               + + EL N   E W   ++D   +A+          +K  +   K L +  D +  
Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F+      ++ +ID L  +G ++E       S+  Q  DM   +             
Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289

Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370
            P  ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V        
Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349

Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                             +S +K  + V L ++++        ++ ++  D      V  
Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408

Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A  + 
Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464

Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +           P E++    D     +   LA++PR++  +    EP  +A +  DLA
Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 514 KKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561


>gi|146280942|ref|YP_001171095.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166232826|sp|A4VH02|SYR_PSEU5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145569147|gb|ABP78253.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 579

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 139/578 (24%), Positives = 241/578 (41%), Gaps = 97/578 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +AE ++A +  D  +  V IAG GF+N 
Sbjct: 30  IQVENTKDKSHGDFASNIAMMLAKPAGMKPRELAEKLIAALPQDAQISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L + L + +    +   +      +V I+  S N    MHVGH R  ++GD + 
Sbjct: 90  FQNSDALAQRLETALADA-QLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVG 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G EV R+ ++ D G Q   L L+       A  +  +DL + Y           
Sbjct: 149 RVLEFLGDEVIRQNHVGDWGTQFGML-LAYLEEKPAAAESELADLEQFYRAAKQRFDESP 207

Query: 212 ELADKYSSEL---LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           E AD+ + EL   L   + + L +     D S+    KI  D L       D+   E  +
Sbjct: 208 EFADR-ARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIY-DRLNVKLTPADV-KGESAY 264

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +    + + DI++ L  +G + E           Q   +D     F++   G+ +   + 
Sbjct: 265 N----ADLADIVEALREKGLLTE-------DNGAQCVFLDE----FKNAE-GNPLPVIVQ 308

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K+ G Y Y   DLA  + + ++   D ++Y        +V + +A+   ++ + A+    
Sbjct: 309 KAGGGYLYATTDLAAMRYRSQQLHADRVLY--------FVDQRQALHFQMAFEVARRAGF 360

Query: 385 LCELVRLYR---------DGMPIKMSKRAGDFITLRHVVDE------------------- 416
           + E ++L           DG P K   R G  + L  ++DE                   
Sbjct: 361 VHEGMQLEHMGFGTMNGADGRPFKT--RDGGTVKLIDLLDEAEQRAYTLVKGKNPELDEA 418

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467
                   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R  S+FR+ 
Sbjct: 419 ELRQIARAVGISAVKYADLSKHRTSDYRFNF-ELMLSFEGNTAPYLLYAYTRVASVFRKL 477

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            K I           + I  + + D   EL L   LA++  V+ +     EP+ L  YLY
Sbjct: 478 GKGI-----------DEISGQIQLDAEQELALAAKLAQFGEVLNSVGEKGEPHLLCAYLY 526

Query: 527 DLASVFHGHWSH---------GRENPRLRFVQANNRKL 555
           DLA +F   + H          ++  RLR      R L
Sbjct: 527 DLAGLFSSFYEHCPILGAEQEAQKQSRLRLAALTGRTL 564


>gi|116513886|ref|YP_812792.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275344|sp|Q04B18|SYR_LACDB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116093201|gb|ABJ58354.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 565

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 113/604 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERP+D   G  +      L++ +   P  IA  +    KID        A   +IN 
Sbjct: 25  VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAVELAE--KIDQGSFEKVEAVGPYINF 81

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L  S     IL  I+     YG   +G G  V  E+ S N   PM +GH R  ++G+ +
Sbjct: 82  FLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAI 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203
           A ++A  G++  R  Y+ D G Q   +  +        ++ ND+D+ +        YY  
Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193

Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           V +    +E  +      ++ S+L +  EE  +     ++ S++   K+       L++ 
Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+     + R+    +G+L   KS+  +  D+++  L      
Sbjct: 250 FDSFTGEAFSAQMMDKPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  PL+  KS+G+ TY   DLA   Y K  Y  GF   IYV+G +   Y ++L A 
Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +    A  +++      +  +G   KMS R G+ + L  V++E              
Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNA 401

Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  +R+N   +DF+  +V K + +  P  YVQYA AR  
Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYARARGE 457

Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+ R++    F D D            ++    E  L+  +A Y   I+ A    +P  +
Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMARYADTIQKAMETYDPSAI 506

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++ V++
Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561

Query: 582 PNEM 585
           P+EM
Sbjct: 562 PDEM 565


>gi|68249833|ref|YP_248945.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335742|sp|Q4QL12|SYR_HAEI8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68058032|gb|AAX88285.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 577

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 138/586 (23%), Positives = 243/586 (41%), Gaps = 88/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFITLRH----------VVDEVGS 419
               ++L +  + +  R G  +K++       +RA   I  ++          V++ +G 
Sbjct: 367 KNFGMMLGKDGKPFKTRTGGTVKLADLLNEAIERATVLINEKNTNLSNDEKQAVIEAIGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +        D + 
Sbjct: 427 GSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT-------DINS 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P   + D  E  L + L ++   ++       P+ L  YLY+LA +F   + H 
Sbjct: 479 TALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFSSFYEH- 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N  + + RL+L       +  GL ++G+++  +M
Sbjct: 537 -----CPILNAENESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|212697346|ref|ZP_03305474.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675795|gb|EEB35402.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 535

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 236/587 (40%), Gaps = 112/587 (19%)

Query: 50  AMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVV 107
           A+   + L  +P  IA EL     K D    S   +   ++N Y+   YL+ ++L  I+ 
Sbjct: 10  ALFWQKKLRKNPAIIAKELKEDLEKEDSPYFSKVDSLNAYLNFYIDRKYLQDQVLREIIK 69

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               YGR+ +GKG  + ++F S N   P H+GH R  V+GD + ++  F GY      YI
Sbjct: 70  EKENYGRSDMGKGKNIVLDFSSVNIAKPFHIGHIRSTVIGDAIRNIHDFLGYNTIASNYI 129

Query: 168 NDAGAQINTLA--------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
            D G Q   +                     L+++ RY +   +ND D+           
Sbjct: 130 GDYGTQFGIMIAAYKLWGDDDKLNQNPIKELLNLYVRYNEQA-SNDQDMMNEARDEFRRL 188

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
             G+E A +  S         W    K+ S +   ++     K L+I  D +  E     
Sbjct: 189 EEGEEEAVRLWS---------WF---KEISFKEFYRV----YKLLDINFDNYHGE----A 228

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---L 324
                I D++D L  +  + E       S   Q  D+ +              D P   +
Sbjct: 229 YQSKYIPDVLDQLEEKNLLTE-------SDGAQIIDLSK-------------YDLPPAII 268

Query: 325 LKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA------------ 371
           +KS+GS  Y   D+A     K    F   +YV+ +  + + ++L A+             
Sbjct: 269 IKSNGSSAYITRDIATAINRKKTYDFSENLYVVATQQNLHFQQLWAILELMGYDFYKECK 328

Query: 372 -----------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                        +S +K Q+ V L +++    D     M  R      L      VG  
Sbjct: 329 HIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIDKTKEIMKDRDSALENLDETAQIVGIG 387

Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFD 478
           +V+F  L+    +   FD+  +   + +  P  YVQY+YAR +S+ ++ + D F  ++FD
Sbjct: 388 AVKFQELYNNRIKDYVFDWDNLLNFEGETGP--YVQYSYARAKSVLKKGQIDNFDKVEFD 445

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +           E  LI  LAE+   I  A    EP  ++  + D+A  F+  ++ 
Sbjct: 446 LLNTD----------EEFNLIKSLAEFKESIVRAKEKYEPSIISRKVMDIAKNFNKFYNT 495

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       +  ++ KL   RL L +A + +I +GL ++G+++ ++M
Sbjct: 496 SK-------IMVDDEKLKEQRLALAYATSIVIKNGLKLLGIKTVDQM 535


>gi|325125547|gb|ADY84877.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 565

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 113/604 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERP+D   G  +      L++ +   P  IA  +    KID        A   +IN 
Sbjct: 25  VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAVELAE--KIDQGSFEKVEAVGPYINF 81

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L  S     IL  I+     YG   +G G  V  E+ S N   PM +GH R  ++G+ +
Sbjct: 82  FLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAI 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203
           A ++A  G++  R  Y+ D G Q   +  +        ++ ND+D+ +        YY  
Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193

Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           V +    +E  +      ++ S+L +  EE  +     ++ S++   K+       L++ 
Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+     + R+    +G+L   KS+  +  D+++  L      
Sbjct: 250 FDSFTGEAFSAQMMDKPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  PL+  KS+G+ TY   DLA   Y K  Y  GF   IYV+G +   Y ++L A 
Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +    A  +++      +  +G   KMS R G+ + L  V++E              
Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401

Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  +R+N   +DF+  +V K + +  P  YVQYA AR  
Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYARARGE 457

Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+ R++    F D D            ++    E  L+  +A Y   I+ A    +P  +
Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMARYADTIQKAMETYDPSAI 506

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++ V++
Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561

Query: 582 PNEM 585
           P+EM
Sbjct: 562 PDEM 565


>gi|300812690|ref|ZP_07093099.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496317|gb|EFK31430.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 565

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 150/604 (24%), Positives = 258/604 (42%), Gaps = 113/604 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERP+D   G  +      L++ +   P  IA  +    KID        A   +IN 
Sbjct: 25  VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L  S     IL  I+     YG   +G G  V+ E+ S N   PM +GH R  ++G+ +
Sbjct: 82  FLDKSQTGAAILQEILADPENYGARDLGHGRNVSTEYSSPNIAKPMGMGHLRSTMIGEAI 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203
           A ++A  G++  R  Y+ D G Q   +  +        ++ ND+D+ +        YY  
Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193

Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           V +    +E  +      ++ S+L +  EE  +     ++ S++   K+       L++ 
Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+     + R+    +G+L   KS+  +  D+++  L      
Sbjct: 250 FDSFTGEAFSAQMMDEPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  PL+  KS+G+ TY   DLA   Y K  Y  GF   IYV+G +   Y ++L A 
Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +    A  +++      +  +G   KMS R G+ + L  V++E              
Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401

Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  +R+N   +DF+  + VK + +  P  YVQY+ AR  
Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYSRARGE 457

Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+ R++    F D D            ++    E  L+  +  Y   I+ A    +P  +
Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMGRYADTIQKAMETYDPSAI 506

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++ V++
Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561

Query: 582 PNEM 585
           P+EM
Sbjct: 562 PDEM 565


>gi|260582207|ref|ZP_05850001.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094839|gb|EEW78733.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 577

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 140/592 (23%), Positives = 247/592 (41%), Gaps = 100/592 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   +AM K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEVFAEKARNYVVKLQGGDEYCRAMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260

Query: 271 -SPIR-DIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P+   I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVL 384
            DG + Y   D+A  K +YE    D  +    +  S ++++    A  ++ K   + +  
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPDSF 362

Query: 385 LCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
             E     + L +DG P K   R G  + L  ++DE                        
Sbjct: 363 SLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKQAV 420

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +      
Sbjct: 421 IEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT----- 474

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D++       ++  +   D  E  L + L ++   ++       P+ L  YLY+LA +F 
Sbjct: 475 DINSTALLAALLTIK---DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFS 531

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 532 SFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|227111621|ref|ZP_03825277.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 576

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 138/606 (22%), Positives = 240/606 (39%), Gaps = 111/606 (18%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I +      G    N  M +++ LG+ P  +AE +V  + ++   +   IAG GFIN++L
Sbjct: 28  IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              ++   + +  ++  + G   +   T V I++ + N    MHVGH R  ++GD  A  
Sbjct: 88  DKQWIASQVEN-ALNAPKLGLTPVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDASART 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSD 195
           +AF G+ V R  ++ D G Q   L                   L  F+R  +  Y+ D+D
Sbjct: 146 LAFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNESASEMDLSDLEAFYREAKKHYDEDAD 205

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             E     V    V  +  D+Y  ++       W  +V     Q  +   R  L     +
Sbjct: 206 FAERARAYV----VKLQGGDEYCRQM-------WRKLVDITMTQNQINYER--LNVTLTK 252

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D+ + E  ++   P     I+ +L  +G   E       S+      +D  +       
Sbjct: 253 QDV-MGESLYNSMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK-----NK 295

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRL 367
            G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    +       V++ 
Sbjct: 296 EGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAWTIVRKA 355

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             V  +VS +     ++L       +DG P K   RAG  I L  ++DE    +++  ++
Sbjct: 356 GYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSDLLDEAYDRALK--LI 405

Query: 428 WRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459
             KN           ++++     K  + SK                  N   Y+QYAY 
Sbjct: 406 AEKNPQMESDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPYMQYAYT 465

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SIF++A      +  D   + +       D  E  L   L ++   I +      P+
Sbjct: 466 RVASIFKRA-----GIQEDSLTQPITLS----DEREFALATRLLQFEETITSVAREGTPH 516

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YLYDLA +F G + H         + A +  +   RL+L    A  +  GL+ +G+
Sbjct: 517 VMCSYLYDLAGLFSGFYEH------CPILNAESDDVRQSRLRLALLTAKTLKLGLDTLGI 570

Query: 580 ESPNEM 585
           E+  +M
Sbjct: 571 ETVEKM 576


>gi|229587962|ref|YP_002870081.1| arginyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511653|sp|C3KAH3|SYR_PSEFS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229359828|emb|CAY46678.1| arginyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 578

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 132/575 (22%), Positives = 235/575 (40%), Gaps = 92/575 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+LS+P G+ P  +AE I+A + +D  V    IAG GFIN 
Sbjct: 30  IQVENTRDKTHGDFASNIAMMLSKPAGMKPRDLAEKIIAALPVDDSVTKAEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   +  ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTQALAGRLDAALADA-RVGVRKAGPAQRTVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G EV R+ ++ D G Q   L    + +      +  SDL   Y          +
Sbjct: 149 RVLEFLGDEVVRQNHVGDWGTQFGMLM--AYLQENPITSDELSDLENFYRAAKKRFDESE 206

Query: 212 ELADKYSSEL--LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD+    +  L   + + L +    KD S+    KI   +L  + +     + E  ++
Sbjct: 207 AFADRARGLVVKLQAGDAECLALWTKFKDISLSHCQKIY--ELLNVKLTMADVMGESAYN 264

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 + +++++L   G + E       S   Q   +D     F++   G+ +   ++K
Sbjct: 265 ----DDLINVVNDLKAAGMLVE-------SNGAQCVFLDE----FKNA-DGEPLPVIIVK 308

Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +DG Y Y   DLA    +Y  G    D  +Y +    + + +++ AVA     +KA    
Sbjct: 309 ADGGYLYATTDLA--AVRYRSGTLKADRALYFVDQRQALHFQQVFAVA-----RKAGFVT 361

Query: 384 LLCELVRL--------------YRDGMPIKM-------SKRAGDFIT----------LRH 412
              ++  +               RDG  +K+        +RA   +           LR+
Sbjct: 362 HPMDMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQERAYTLVKEKNPELAEADLRN 421

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   VG  +V++  L +  +    F+F  +    + N   Y+ YAY R   +FR+    F
Sbjct: 422 IARVVGIGAVKYADLSKHRTSDYSFNF-DLMLNFEGNTAPYLLYAYTRVAGVFRKLGKDF 480

Query: 473 PDLDFDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            ++            E + D   + E +L   LA++  V+ +      P+ L  YLY++A
Sbjct: 481 SEV------------EGQIDLQASHEQELAAKLAQFGEVLNSVGEKGTPHILCTYLYEVA 528

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          ++  RLR      R L
Sbjct: 529 GLFSSFYENCPILTADDEAQKQSRLRLAALAGRTL 563


>gi|289425965|ref|ZP_06427712.1| arginine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153508|gb|EFD02222.1| arginine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 586

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 61  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 120

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 121 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 176

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 177 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 236

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 237 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 290

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 291 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 332

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 333 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 391

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 392 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 449

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 450 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 507

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 508 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 560

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 561 LALCAATRRVLGRGLDLLGIDAPDRM 586


>gi|304384651|ref|ZP_07366997.1| arginine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328845|gb|EFL96065.1| arginine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 562

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 260/584 (44%), Gaps = 81/584 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P++   G L+      L++ L   P  IA+ +V +I    D + V +AG  +IN +L
Sbjct: 28  IEVPKESKLGDLAF-PTFTLAKVLRKAPQMIAQDLVEKID-QSDFEKVEVAGP-YINFFL 84

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              ++  ++L +++     YG N  G+   V I+  S N   P+ +GH R  V+G++LA 
Sbjct: 85  DKQAFGEEVLRTVLDQKSAYGDNDNGQNGNVPIDMSSPNIAKPISMGHLRSTVIGNSLAL 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +M  +GY   +  ++ D G Q   L  +        L+ ++ D+       +   +V   
Sbjct: 145 IMEKNGYHPIKINHLGDWGTQFGKLITAY------KLWGSEEDVKADPINKLLEYYVRFH 198

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFHRGD 269
             DK   EL +   + W   ++D   +A  + K  R+  L++    +D      D ++G+
Sbjct: 199 KEDKEKPELDDIARD-WFKKLEDGDEEATNLWKWFREVSLQSFKQIYDKLGITFDSYKGE 257

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KS 327
            +   D +D + +   + E      +S+  Q  D+++  L             P L  K+
Sbjct: 258 -AFYNDKMDEIVQ---ILEDKDLLKESRGAQVVDLEKYNL------------NPALIKKT 301

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---------------- 370
           DG+  Y   DLA    +Y    F   +YV+G++ + + K+L+AV                
Sbjct: 302 DGATLYITRDLAAALYRYRTYNFVQSLYVVGAEQTNHFKQLKAVLKEMGYDWSDDIHHIQ 361

Query: 371 -------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                     +S +  ++ VLL E++         +++++  D      V  EVG  +V 
Sbjct: 362 FGLITLNGKKLSTRSGRV-VLLDEVLNDAVTLAKKQINEKNPDLANADTVAKEVGVGAVV 420

Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           F  L  + +   DF+    V+ + +  P  YVQY+ AR  SI R+A       D ++   
Sbjct: 421 FHDLKNERTNSFDFNLEDVVRFEGETGP--YVQYSRARAESILRKA-------DTEVTTD 471

Query: 483 NV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + I   + +DT     +  L E+P V++ A    EP  +A Y   LA  F+ ++++ R 
Sbjct: 472 QLKITDANAWDT-----LKALQEFPSVVQRAAAQYEPSVIAKYALSLAKSFNKYYANSR- 525

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A++ +    RL LV +V+ ++   L ++GV++P+EM
Sbjct: 526 ------ILADDAE-KPARLALVKSVSLVLEEALRLLGVKAPDEM 562


>gi|42518608|ref|NP_964538.1| arginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81668171|sp|Q74KR5|SYR_LACJO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|41582893|gb|AAS08504.1| arginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 558

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 258/599 (43%), Gaps = 109/599 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 24  MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIS-DDNFTSIQAVGP-YVNF 80

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +G+G  V I+  S N   PM +GH R  V+G+++
Sbjct: 81  AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEGDVKKDPITNLFHYYVK 193

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + +G+ K+L+ V
Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341

Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K  + V L ++++        ++ ++  + 
Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466
              + V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI R
Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     ++  D    N        D     +   LA++P ++E A+   EP  +A Y  
Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASEKFEPSIIAKYAL 507

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DL+  F+ ++++      +R +  +N+     RL LV A + ++   L ++GV +P EM
Sbjct: 508 DLSKKFNKYYAN------VRILDEDNQ--LNARLALVQATSIVLTEALRLLGVNAPKEM 558


>gi|302024623|ref|ZP_07249834.1| arginyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330833730|ref|YP_004402555.1| arginyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307953|gb|AEB82369.1| arginyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 562

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 253/604 (41%), Gaps = 118/604 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  IV   K+D       +A   ++N +
Sbjct: 26  LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAADIVE--KLDTTGFEKVVATGPYVNFF 82

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L+ ++    +YG+  IG+G  V I+  S N   P  VGH R  V+GD LA
Sbjct: 83  LDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY+  R  ++ D G Q   L ++   W  + A+  +    P      +Y++ + 
Sbjct: 143 NIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGDKAAVEAD----PISELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E  +K     L+    +W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 198 AEAEEKPE---LDDEARQWFKKLEDGDSEAHELWQWFRDESLVEFNRIYDKLDVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK  +  D++   L             P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGARIVDLESYNL-------------PP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             ++K+DG+  Y   D+A   Y K  Y+  F   IY++G +   + K+L+AV   +    
Sbjct: 295 ALIMKTDGATLYITRDMATAMYRKRTYD--FVKSIYIVGQEQINHFKQLKAVLKEMDFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    +   L       +D    K+S R G+ I L   +DE                  
Sbjct: 353 SDDMTHVTFGLVT-----KDKK--KLSTRKGNIILLEPTLDEAISRALTQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +SI R+A
Sbjct: 406 KEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQ-ESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                         N +P  E+++   D     +I H+  +  V+E A    +P  +A Y
Sbjct: 464 --------------NFVPSAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAKY 509

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             +LA  F+ +++H R   E+P               RL L +A   ++   L ++GV++
Sbjct: 510 AINLAQAFNKYYAHTRILDESPERD-----------SRLALAYATGLVLKEALRLLGVKA 558

Query: 582 PNEM 585
           P +M
Sbjct: 559 PEKM 562


>gi|253989980|ref|YP_003041336.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639039|emb|CAR67652.1| arginyl-trna synthetase (ec 6.1.1.19) (arginine--trna ligase)
           (argrs) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781430|emb|CAQ84593.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 576

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 244/587 (41%), Gaps = 91/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE +V+ + +      V IAG GFIN++L  +++   +
Sbjct: 37  GDYQANGVMAAAKKVGMPPRQLAEKVVSLLDLQGIASKVEIAGPGFINIFLDKAWIAANV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  +   + G   +   T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  ET-ALKDEKLGITPVKPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L ++   + Q     N SD+               +L   Y     
Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQN---ENASDMAL------------SDLEAFYREAKK 198

Query: 223 NFPEEKWLPI-VKDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           N+ E++   +  + Y V  Q   +  R   + L I   +  ++  + R + +  RD +  
Sbjct: 199 NYDEDEEFAVRARSYVVKLQGGDEYCRTMWRKL-IDITMVQNQQTYDRLNVTLTRDSVMG 257

Query: 280 LARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTY 333
            +    +Y  +LP   +   QK    + D   +++        G+ +   + K DG Y Y
Sbjct: 258 ES----LYNDLLPGLVADLKQKGLAVESDGATVVYLDEYKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385
              D+A  K +YE    D ++Y + S    +       V++   V  +VS +     ++L
Sbjct: 314 TTTDIACAKYRYETLHADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHMFGMML 373

Query: 386 CELVRLYRDGMPIKMS---------------KRAGDFI----------TLRHVVDEVGSD 420
                  +DG P K                 +RA   I           L+ VV+ VG  
Sbjct: 374 G------KDGKPFKTRAGGTVRLTDLLDEAIERANTLIREKNPDMPKDELKKVVEAVGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF++A      +D +  
Sbjct: 428 AVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVTSIFKRA-----GIDENSL 481

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFHGHWSH 538
              VI  E      E  L   L ++   I   T+A+E  P+ +  YLYDLA +F G + H
Sbjct: 482 TLPVILNEER----EQALATRLLQFEETI--TTVAREGTPHVMCAYLYDLAGLFSGFYEH 535

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A +  L   RL+L    A  +  GLN +G+E+   M
Sbjct: 536 ------CQILNAESEALRQSRLKLALLTAKTLKQGLNTLGIETVERM 576


>gi|73953488|ref|XP_853102.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 1 [Canis
           familiaris]
          Length = 660

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 136/584 (23%), Positives = 254/584 (43%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  V+ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+
Sbjct: 171 VSQQLTNLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K + +  +  + R +   +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + D++     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MNDVVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374
           Y  +DLA  K + +E   D +IYV+ +  S + + +   A  +                 
Sbjct: 384 YDTSDLAALKQRLFEEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGV 443

Query: 375 --SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
              E K +      E VR   L  +G+   M K   +  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     +++ ++  +
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQK 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AAQETKIVLDHEKEWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+I+    +I+G++    M
Sbjct: 618 VEKDRQT-GQVLKVNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 660


>gi|117922106|ref|YP_871298.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166232843|sp|A0L1H3|SYR_SHESA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|117614438|gb|ABK49892.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 581

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 146/597 (24%), Positives = 244/597 (40%), Gaps = 86/597 (14%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQLIIDNLPASNYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  S L   L +  +S    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDSALANQLQA-AISDEHLGIKLPTPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYI--------------------NDAGAQINTLALSVFWRYQQALY 190
              + F G++V R+ ++                    N   AQ+    L  F+R  +  +
Sbjct: 147 VRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKLRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---------- 240
           +  ++        V     G E  +K   E  +        + +   V            
Sbjct: 207 DESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGESA 266

Query: 241 ----MMKIIRD-DLKALNIQHD----IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               + ++++D D + L  Q +    +F  E     G+  P+   I   A  GY+Y    
Sbjct: 267 YNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPV---IIQKADGGYLY---- 319

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 TT    M  +  + ++  V   VD R  L     ++   A LA F  + +   +
Sbjct: 320 -----ATTDLAAMRYRSSVLKADRVLYFVDLRQALHFQQVFSL--AKLAKF-VRNDMSLE 371

Query: 351 NMIY--VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           ++ +  + G D   +  R   V   V +   + N    ELVR     M         D  
Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLV-DLLDEANTRALELVRSKNPDM---------DEA 421

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TL  +   VG  +V++  L +  +    F F ++    + N   Y+ YAY R   IF++A
Sbjct: 422 TLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIFKRA 480

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            DI  DL      + V+  E E D         LA++  ++       +P+ L  YLY+L
Sbjct: 481 TDI--DLSQ---AKIVLEHEKEKDLGN-----KLAQFGEILSRVVDKGQPHVLCGYLYEL 530

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F   +      P L    A+N +    RL L    A+ +  GLN++G+E+   M
Sbjct: 531 AGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581


>gi|315286577|gb|EFU46012.1| arginyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 543

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 232/537 (43%), Gaps = 78/537 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G+   N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G  +  K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++D + L  
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             VI +E      E QL   L ++   +        P+ +  YLYDLA +F G + H
Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536


>gi|145592712|ref|YP_001157009.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145302049|gb|ABP52631.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 572

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 149/603 (24%), Positives = 246/603 (40%), Gaps = 113/603 (18%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     +AA+ L+R LG  P  IA  ++ ++++     +V ++G GFINL ++ S 
Sbjct: 28  RRSQHADYQCDAALSLARRLGRRPRDIAAEVLGQVELADLCSAVTVSGPGFINLTVADSA 87

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L  +LS+   +    G         V +++ + N    MHVGH R  V+GD    L+ + 
Sbjct: 88  LGTLLST-AAADTRLGIARSAATDTVVVDYSAPNVAKEMHVGHLRSTVIGDAAVRLLEWR 146

Query: 158 GYEVTREYYINDAGAQINTL--------------ALSV-----FWRYQQALYNNDSDLPE 198
           G++V +  ++ D G     L               LSV     F++  +A ++ D    E
Sbjct: 147 GHQVIKANHLGDWGTPFGMLIEHLLDLGESEAADELSVGDLDSFYKAARATFDTDDGFRE 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G EL  +   +L+   E+ +L +              D L  L  + D 
Sbjct: 207 RARRRVVALQRGDELTLRLWRQLVAESEKYFLTVY-------------DQLGVLLTEQD- 252

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           F  E  ++    +P+ D +D L        G+L   +      C       +F +   G 
Sbjct: 253 FCGE-SYYNDRLAPVTDELDRL--------GLL---RESGDAAC-------VFPAGFAGR 293

Query: 319 DVDRPL----LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA-- 371
           D  +PL     K DG Y Y A DLA  + + +  G   ++YV+G     + + + AVA  
Sbjct: 294 D-GQPLPIIVRKRDGGYGYGATDLAAIRHRTQCLGATRLLYVVGLPQRQHFELVYAVARQ 352

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
           A      A+   L    + L  DG  ++   R GD I L  ++DE               
Sbjct: 353 AGWLRSPARAEHLGFGSI-LGSDGKMLR--SRTGDSIKLVGLLDEAVTRAAELARQKNPD 409

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  ++++  L    ++   FD+ ++      N   Y+QYA+AR RSI
Sbjct: 410 LSATEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLDG-NTAPYLQYAHARIRSI 468

Query: 465 FRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           FR+A  +   P       P  +  Q      +E  L + LA +  V+ N     + ++LA
Sbjct: 469 FRRAEIEQFIP------APITIRHQ------AEHALALELAGFGAVVANVEQTLQFHRLA 516

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ LA+ F G +      P LR   A        RL L    A ++  GL ++G+ +P
Sbjct: 517 GYLHTLATTFSGFYE---ACPVLRAEDAVRDS----RLALCDLTARVLRQGLYLLGIATP 569

Query: 583 NEM 585
           + M
Sbjct: 570 DRM 572


>gi|270290467|ref|ZP_06196692.1| arginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270281248|gb|EFA27081.1| arginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 562

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 260/584 (44%), Gaps = 81/584 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IE P++   G L+      L++ L   P  IA+ +V +I    D + V +AG  +IN +L
Sbjct: 28  IEVPKESKLGDLAF-PTFTLAKVLRKAPQMIAQDLVEKID-QSDFEKVEVAGP-YINFFL 84

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              ++  ++L +++     YG N  G+   V I+  S N   P+ +GH R  V+G++LA 
Sbjct: 85  DKQAFGEEVLRTVLDQKSAYGDNDDGQNGNVPIDMSSPNIAKPISMGHLRSTVIGNSLAL 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +M  +GY   +  ++ D G Q   L  +        L+ ++ D+       +   +V   
Sbjct: 145 IMEKNGYHPIKINHLGDWGTQFGKLITAY------KLWGSEEDVKADPINKLLEYYVRFH 198

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFHRGD 269
             DK   EL +   + W   ++D   +A  + K  R+  L++    +D      D ++G+
Sbjct: 199 KEDKEKPELDDIARD-WFKKLEDGDEEATNLWKWFREVSLQSFKQIYDKLGITFDSYKGE 257

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KS 327
            +   D +D + +   + E      +S+  Q  D+++  L             P L  K+
Sbjct: 258 -AFYNDKMDEIVQ---ILEDKDLLKESRGAQVVDLEKYNL------------NPALIKKT 301

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---------------- 370
           DG+  Y   DLA    +Y    F   +YV+G++ + + K+L+AV                
Sbjct: 302 DGATLYITRDLAAALYRYRTYNFVQSLYVVGAEQTNHFKQLKAVLKEMGYDWSDDIHHIQ 361

Query: 371 -------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                     +S +  ++ VLL E++         +++++  D      V  EVG  +V 
Sbjct: 362 FGLITLNGKKLSTRSGRV-VLLDEVLNDAVTLAKKQINEKNPDLANADTVAKEVGVGAVV 420

Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           F  L  + +   DF+    V+ + +  P  YVQY+ AR  SI R+A       D ++   
Sbjct: 421 FHDLKNERTNSFDFNLEDVVRFEGETGP--YVQYSRARAESILRKA-------DTEVTTD 471

Query: 483 NV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + I   + +DT     +  L E+P V++ A    EP  +A Y   LA  F+ ++++ R 
Sbjct: 472 QLKITDANAWDT-----LKALQEFPSVVQRAAAQYEPSVIAKYALSLAKSFNKYYANSR- 525

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A++ +    RL LV +V+ ++   L ++GV++P+EM
Sbjct: 526 ------ILADDAE-KPARLALVKSVSLVLEEALRLLGVKAPDEM 562


>gi|237739425|ref|ZP_04569906.1| arginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423033|gb|EEO38080.1| arginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 569

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 137/578 (23%), Positives = 250/578 (43%), Gaps = 82/578 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I A+      V+ + +AG GFIN++L+  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            SI   G  Y  + + +  KV I+F S N    MH+GH R  ++G+++A +M + GY+V 
Sbjct: 96  DSIKKIGEAYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESIARIMRYLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSS 219
            + +I D G Q   L +    W  ++A   N  +  E  Y   + +   K+  L D   +
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK-FSEEAEKDPSLEDLARA 214

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      + D++
Sbjct: 215 ELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMADVV 269

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L  +    +           +    D K  LF            + K DG+Y Y  +D
Sbjct: 270 KELEEKKLAVD-------DDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYSTSD 313

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +A  K + +    + MIY+  +    + K+   +   +     + ++    ++R + DG+
Sbjct: 314 IATVKFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHIWFG-IIR-FADGI 371

Query: 397 PIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWR 429
              +S R G+ I L  ++DE                           VG  SV++  L +
Sbjct: 372 ---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQ 428

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                + F++ K+    + N   Y+ Y YAR +SI R+      + + +L     I  E+
Sbjct: 429 NKQSDILFEWDKML-SFEGNTAPYLLYTYARIQSILRK----IDEQNIELNDSVEIKIEN 483

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           + + S   L  HL  +P  +  A    +P  +A YLYDL+   +  +++    P L    
Sbjct: 484 KIERS---LATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNC---PIL---- 533

Query: 550 ANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
             N+ +  +  R  L+     ++  GL+++G+   N+M
Sbjct: 534 --NQDIDTLKSRALLIKKTGEVLKEGLSLLGIPVLNKM 569


>gi|192359863|ref|YP_001982872.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692459|sp|B3PKE3|SYR_CELJU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190686028|gb|ACE83706.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 579

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 137/611 (22%), Positives = 248/611 (40%), Gaps = 116/611 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +I   +    G    N AM  ++ +G +P  +A  IVA + ++   D + IAG GFIN+Y
Sbjct: 27  LIAPGKKAGFGDYQANGAMGAAKAMGTNPRDLAGKIVAALDLEGIADKLEIAGPGFINIY 86

Query: 93  LSPSYLRKILS------SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           L P++L K ++       + V   E+ + ++       I++   N    MHVGH R  ++
Sbjct: 87  LKPAWLGKQIALAQTDARLAVPQAEHAQTVV-------IDYSGPNLAKEMHVGHLRSTII 139

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP----EGYYP 202
           GD+LA L+ F G++V R+ ++ D G Q   L   +    +Q     D+ L     E +Y 
Sbjct: 140 GDSLARLLEFLGHQVIRQNHVGDWGTQFGMLIAEL---EEQLGAKGDAALELKDLEVFY- 195

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH------ 256
                    + A K+  +   F ++    +V+     A M  +    K +++ H      
Sbjct: 196 ---------QQAKKHFDDDAAFADKARDYVVRLQGGDAQMLKLWQQFKDISLHHSSEIYQ 246

Query: 257 -------DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                  D  +  + F+  D +P   ++  L  QG   E                +  Q+
Sbjct: 247 QLNVTLTDADVRGESFYNDDLAP---LVKALQDQGLAVES---------------EGAQV 288

Query: 310 LFRSTMVGDDVD-RPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
           +F   +   D +  P++  K  G + Y   DLA  + +        ++Y + +  S +++
Sbjct: 289 VFLPELADKDGNPSPVIIQKQGGGFLYATTDLAALRYRVNTLNAKRIMYFIDARQSLHMQ 348

Query: 366 RLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           ++  +   A  VS+  +  ++    +  +  DG P K   R G  + L  ++ E    + 
Sbjct: 349 QVFTISRKAGFVSDAVSLEHLAFGTM--MGSDGKPFK--TRTGGTVKLAELLSEAVDRAA 404

Query: 423 RFMMLWRKNSELLD-----------------FDFCKVKEQS-----------KENPVFYV 454
              ++  KN EL                    D CK +              + N   Y+
Sbjct: 405 S--VVSEKNPELAGEDIAEIARKVGIGAVKYADLCKTRTNDYVFSWESMLSFEGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R +SIFR+A          + P  +          E  L + L ++  V++    
Sbjct: 463 QYAYTRVQSIFRKA---------GVAPETLGSPILLGSEQEKALAIKLLQFSEVLDQMAR 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ L  YLYD+AS++   +      P L+  +  + ++   RL+L H VA  I  GL
Sbjct: 514 EAMPHLLCTYLYDIASLYMSFY---EACPILK--EGVDAEVRDSRLRLCHLVARTIAQGL 568

Query: 575 NIIGVESPNEM 585
            ++G+E    M
Sbjct: 569 GLLGIEVMERM 579


>gi|295425349|ref|ZP_06818052.1| arginine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065125|gb|EFG56030.1| arginine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 561

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 143/597 (23%), Positives = 256/597 (42%), Gaps = 104/597 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +     IL++ +  +P  IA+ I   +  + +  S+   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PCFILAKTMHKNPAEIAKSIAENLSSE-NFASIQAVGP-YVNFS 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++  G  YG   +GKG  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHGKLISSTLKDVLDKGEHYGDQELGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           + M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 NTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRD----DLK----ALNIQH 256
               ++  E    PE      +W   ++D   +A  + K  R+    D K     L +  
Sbjct: 193 ----RFHKEAEKNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLKDFKRIYNELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 249 DSYNGEAFFN----DKMQPVIDELRDKGLLHE-------SRGAQVVDMGP---------- 287

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + + +   F  M+YV+G++ + +   L+ V     
Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKHYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 347 YDWADDIHHVSFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLANQDQ 405

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A 
Sbjct: 406 VAHDVGVGAVVFHDL--KNDRLDNFDFNLEEVVRFEGDTGP--YVQYTNARAQSVLRKAS 461

Query: 470 DIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            +     D DL     +  E  F  ++      LA++PR+I  +    EP  +A Y  DL
Sbjct: 462 KVGKKPADNDL----ALDDEWSFAVAK-----DLADFPRIIARSADKFEPSVIAKYALDL 512

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ ++++      ++ +  +N+     RL LV A + ++   L ++GV +P EM
Sbjct: 513 AKKFNKYYAN------VKILTDDNQ--IGARLALVQATSIVLTEALRLLGVNAPKEM 561


>gi|261340259|ref|ZP_05968117.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317347|gb|EFC56285.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 577

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 134/590 (22%), Positives = 242/590 (41%), Gaps = 96/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +        IAG GFIN++L P++    L
Sbjct: 37  GDYQANGVMAVAKKLGMPPRQLAEQVLTHLDLTGIASKTEIAGPGFINIFLEPAF----L 92

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +S V + ++  R  + +     + I++ + N    MHVGH R  ++GD       F G++
Sbjct: 93  ASHVDAALKSDRLGVSQPEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTNEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L ++   + QQ    N  ++      G Y +      A K+  E
Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK      Y ++   K++           DI +S++   ++R + +  
Sbjct: 203 DEAFAERARSYVVKLQGGDQYFLEMWRKLV-----------DITMSQNQLTYNRLNVTLT 251

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330
           RD +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKNL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  +     
Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   RAG  + L  ++DE                          
Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLSDLLDEALERARRLVAEKNPDMPADELEKLAN 422

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     ++
Sbjct: 423 AVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NI 476

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D        +   +  +  E QL   L ++   +        P+ +  YLYDLA +F G 
Sbjct: 477 DESALANATV---TITEDREAQLAARLLQFEETLAVVARDGTPHVMCSYLYDLAGLFSGF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A +  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 534 YEH------CPILSAESDSVRSSRLKLAQLTAKTLKLGLDTLGIETVERM 577


>gi|227329329|ref|ZP_03833353.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 576

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 236/612 (38%), Gaps = 123/612 (20%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I +      G    N  M +++ LG+ P  +AE +V  + ++   +   IAG GFIN++L
Sbjct: 28  IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVG 147
              +        V S +E   N    G        + I++ + N    MHVGH R  ++G
Sbjct: 88  DKQW--------VASQVENALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQAL 189
           D  A  + F G+ V R  ++ D G Q   L                   L  F+R  +  
Sbjct: 140 DASARTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNESASEMDLSDLEAFYREAKKH 199

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y+ D+D  E     V    V  +  D+Y  ++       W  +V     Q  +   R  L
Sbjct: 200 YDEDADFAERARAYV----VKLQGGDEYCRQM-------WRKLVDITMTQNQINYER--L 246

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                + D+ + E  ++   P     I+ +L  +G   E       S+      +D  + 
Sbjct: 247 NVTLTKQDV-MGESLYNSMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK- 293

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY----- 363
                  G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    +     
Sbjct: 294 ----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAW 349

Query: 364 --VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             V++   V  +VS +     ++L       +DG P K   RAG  I L  ++DE    +
Sbjct: 350 TIVRKAGYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYDRA 401

Query: 422 VRFMMLWRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFY 453
           ++  ++  KN           ++++     K  + SK                  N   Y
Sbjct: 402 LK--LIAEKNPQMESDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  SIF++A      +  D   + +       D  E  L   L ++   I +  
Sbjct: 460 MQYAYTRVASIFKRA-----GIQEDSLTQPITLN----DEREFALATRLLQFEETITSVA 510

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YLYDLA +F G + H         + A +  +   RL+L    A  +  G
Sbjct: 511 REGTPHVMCSYLYDLAGLFSGFYEH------CPILNAESDDVRQSRLRLALLTAKTLKQG 564

Query: 574 LNIIGVESPNEM 585
           L+ +G+E+  +M
Sbjct: 565 LDTLGIETVEKM 576


>gi|238855154|ref|ZP_04645476.1| arginine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665531|ref|ZP_05866377.1| arginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932567|ref|ZP_06337989.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313473147|ref|ZP_07813631.1| arginine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832235|gb|EEQ24550.1| arginine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239528608|gb|EEQ67609.1| arginine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260560652|gb|EEX26630.1| arginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303315|gb|EFA95495.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 558

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 154/616 (25%), Positives = 265/616 (43%), Gaps = 116/616 (18%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77
           I  ++++ K+ ++ + IERP++   G  +   A IL++ L  +P  IA+ IVA +  D +
Sbjct: 11  ISSQVELPKEKINSL-IERPKNPEMGDYAF-PAFILAKTLHKNPAEIAKDIVANL-ADDN 67

Query: 78  VDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            + +   G  ++N  +  S L  + L  ++V    YG   +G G  V I+  S N   PM
Sbjct: 68  FEKIQAVGP-YVNFSIKKSALISQTLEEVLVKKNNYGNQNLGSGN-VAIDMSSPNIAKPM 125

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
            +GH R  V+G+++A ++   GY   +  ++ D G Q   L  +        L+ N+ D+
Sbjct: 126 SMGHLRSTVIGNSIAKILTKVGYTPIKINHLGDYGTQFGKLITAY------KLWGNEEDV 179

Query: 197 PEG-------YYPGVYLKHVGKE---LADKYSSELLNF----PEE-KWLPIVKDYSVQAM 241
            +        YY  V    V +E   L D+  +         PE  K     +  S+Q  
Sbjct: 180 KKDPINSLFHYY--VKFHEVAEEKPELEDEGRAWFKKLEGGDPEAVKLWNWFRKVSLQEF 237

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +I     K LN++ D +  E  ++      +  I+D L ++  + E       S+  Q 
Sbjct: 238 NRI----YKKLNVEFDSYHGEAFYN----DKMDVIVDELRQKDLLVE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMG 357
            D+            G D +  + LKSDG+  Y   DL    Y K  Y+  F   +YV+G
Sbjct: 283 VDL------------GPDKNPAMILKSDGTSIYTTRDLTAAEYRKKHYD--FVQALYVVG 328

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------- 410
           ++ S Y ++L+ V   +    A  ++       + + G   K+S R G+ + L       
Sbjct: 329 NEQSAYFEQLKEVLKKMGHNWAD-DIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLEDA 385

Query: 411 ------------------RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKEN 449
                               V +EVG  +V F  L  KN  L  FDF     V+ + +  
Sbjct: 386 VELAMKQIETKNPGLPNKEQVANEVGIGAVVFHDL--KNDRLDAFDFNLEEVVRFEGETG 443

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P  YVQY  AR +SI R+A  I    + DL            D     +   LA++P V+
Sbjct: 444 P--YVQYTNARAQSILRKANQIVTIDELDL-----------SDEWAFAVAKDLADFPAVL 490

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A+   EP  +A +   LA  F+ ++++      +R +  +++     RL LV A + +
Sbjct: 491 AKASEKYEPSIIAKFALKLAKHFNKYYAN------VRILDEDDQ--LAARLALVKATSIV 542

Query: 570 INSGLNIIGVESPNEM 585
           +   L+++GV +P EM
Sbjct: 543 LTESLHLLGVAAPKEM 558


>gi|313763775|gb|EFS35139.1| arginyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313793676|gb|EFS41707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802987|gb|EFS44195.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313810614|gb|EFS48328.1| arginyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813755|gb|EFS51469.1| arginyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313816906|gb|EFS54620.1| arginyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313829707|gb|EFS67421.1| arginyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313839384|gb|EFS77098.1| arginyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314916670|gb|EFS80501.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918872|gb|EFS82703.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920883|gb|EFS84714.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314932325|gb|EFS96156.1| arginyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314956601|gb|EFT00853.1| arginyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314959481|gb|EFT03583.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314964676|gb|EFT08776.1| arginyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314968918|gb|EFT13016.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315079335|gb|EFT51336.1| arginyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315082371|gb|EFT54347.1| arginyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315100250|gb|EFT72226.1| arginyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315102574|gb|EFT74550.1| arginyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315109666|gb|EFT81642.1| arginyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327455900|gb|EGF02555.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456007|gb|EGF02662.1| arginyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327458052|gb|EGF04707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328757213|gb|EGF70829.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328757596|gb|EGF71212.1| arginyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 582

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|167468376|ref|ZP_02333080.1| arginyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 532

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 134/586 (22%), Positives = 235/586 (40%), Gaps = 105/586 (17%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   +        V   +
Sbjct: 1   MAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW--------VAEKV 52

Query: 111 EYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           EY       G        + +++ + N    MHVGH R  ++GD     +AF G+ V R 
Sbjct: 53  EYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRA 112

Query: 165 YYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            ++ D G Q   L                   L +F  YQQA    D D         Y+
Sbjct: 113 NHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEFALRARAYV 170

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             V  +  D+Y  ++       W  +V      A  ++  D L  + +  D  + E  ++
Sbjct: 171 --VKLQSGDEYCRQM-------WRKLVD--ITMAQNQVAYDRLN-VTLTKDDVMGESLYN 218

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
              P    +I+ +L  +G   E      +  T    D  + +        G+ +   + K
Sbjct: 219 AMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQK 262

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKK 378
            DG Y Y   D+A  K +YE  G D ++Y + S    +       V++   V  +V  + 
Sbjct: 263 KDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEH 322

Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGS 419
               ++L +  + +  R G  +K+S       +RAG  I           L+ V++ VG 
Sbjct: 323 HMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGI 382

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    FD+  +      N   Y+QYAY R  S+FR+A      L   L
Sbjct: 383 GAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVDETSLTLPL 441

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V+ ++ E       L   L ++  +I        P+ +  YLYDLA +F   + H 
Sbjct: 442 ----VVTEDRE-----ATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEH- 491

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 492 -----CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 532


>gi|289427907|ref|ZP_06429611.1| arginine--tRNA ligase [Propionibacterium acnes J165]
 gi|289158790|gb|EFD06990.1| arginine--tRNA ligase [Propionibacterium acnes J165]
          Length = 586

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 61  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 120

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 121 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 176

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 177 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLYQDSKKTFDADPQFADRARR 236

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 237 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 290

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 291 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 332

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 333 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 391

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 392 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 449

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 450 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 507

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 508 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 560

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 561 LALCAATRRVLGRGLDLLGIDAPDRM 586


>gi|332686748|ref|YP_004456522.1| arginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370757|dbj|BAK21713.1| arginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 563

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 264/591 (44%), Gaps = 94/591 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+   HG ++     IL++     P  IA  +  +I    + + + + G  ++N ++
Sbjct: 28  LETPKAVEHGDVAF-PTFILAKTYRKAPKQIATELAEKINT-TEFEKIAVVGP-YLNFFM 84

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               + ++++ +I+     YG   IG+   + I+  S N   P+ +GH R  V+G+++A 
Sbjct: 85  CKEMISQQVIQTILQEKNHYGEYTIGENRNITIDMSSPNIAKPISMGHLRSTVIGNSIAL 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++   GY+  R  ++ D G Q   L ++    Y++      S+      P + L H+  +
Sbjct: 145 ILKKIGYQPVRINHLGDWGTQFGKLIVA----YKKW----GSEEKVKMTPILELFHLYVK 196

Query: 213 LADKYS-SELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHRG 268
             D+   +E LN     W   +++   +A  + K  R++ L+  N  + +     D + G
Sbjct: 197 FHDEAEKNEELNDEARVWFKKLEEGDTEATQLWKWFREESLQEFNKIYAMLEVSFDSYNG 256

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + +I+  L  +  + E        K  +  D+   +L             P L
Sbjct: 257 EAFYNDKMDEIVTMLEEKHLLEE-------DKGAEIVDLSSYEL------------NPAL 297

Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---------- 370
             KSDG+  Y   DLA   Y K  Y+  F   +Y++G++ + + K+L+AV          
Sbjct: 298 IRKSDGATLYITRDLAAALYRKRTYD--FAKSLYIVGNEQAIHFKQLKAVLKELGFDWSD 355

Query: 371 -------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                           +S +K ++ VLL E++    +    +++++  + +    V  +V
Sbjct: 356 DMKHIPFGLITQGGKKLSTRKGKV-VLLEEVLNEAIESANQQIAEKNPELMNREEVAKQV 414

Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           G  +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A +  P 
Sbjct: 415 GIGAVIFHDL--KNDRLNNFDFVLDEVVQFEGETGP--YVQYTHARAMSILRKA-EFIPK 469

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D + +  N        D+   ++I  L E+P ++  A    EP  +A +   LA  F+ 
Sbjct: 470 ADTN-YALN--------DSESWRIIKLLQEFPTIVLTAADKYEPSVIAKHAIRLAQAFNK 520

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++      +++ +  +N+K    RL LV+A+  I+   L ++G+ +PNEM
Sbjct: 521 YYA------QVKILTEDNQKEN--RLALVYALTIILKEDLRLLGLHAPNEM 563


>gi|260944172|ref|XP_002616384.1| hypothetical protein CLUG_03625 [Clavispora lusitaniae ATCC 42720]
 gi|238850033|gb|EEQ39497.1| hypothetical protein CLUG_03625 [Clavispora lusitaniae ATCC 42720]
          Length = 621

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 233/560 (41%), Gaps = 99/560 (17%)

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           ++ +K +      F   K   NL +  +  RK          +YG   +G G K+ IEF 
Sbjct: 118 LSEVKAEGQFLQFFFDKKCLFNLVIKDTLTRKT---------DYGYLPLGVGKKIIIEFS 168

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P H GH R  ++G  L++L   +G++VTR  Y+ D G Q   LA+         
Sbjct: 169 SPNIAKPFHAGHLRSTIIGGFLSNLYEKAGWDVTRINYLGDWGKQFGLLAVGF------E 222

Query: 189 LYNNDSDL---PEGYYPGVYLKHVGKELADKYSSE------------LLNFPEEKWLPIV 233
            Y ++S L   P  +   VY+K V K++ D+   E             +   +E+ L + 
Sbjct: 223 KYGDESKLETDPINHLFEVYVK-VNKDITDEGDVEGGTNDKARAYFKRMEDGDEEALKMW 281

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + +   ++ K + D    LNI++D++  E    +     ++++I     +G V+E     
Sbjct: 282 RKFRDLSIEKYV-DTYSRLNIKYDVYSGESQVSQ---ESMKNVIKLFGEKGLVHE----- 332

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDN 351
                      DR   L   T     + + L+ KSDG+  Y   D+     +YE+  FD 
Sbjct: 333 -----------DRGAKLIDLTKFNKKLGKCLVEKSDGTSLYLTRDVGEAMKRYEQFHFDK 381

Query: 352 MIYVMGSD---HSG------------YVKRLEAV----AAAVSEKKAQINVLLCELVRLY 392
           MIYV+ S    H+             + K LE V       +S +K  + V L  ++   
Sbjct: 382 MIYVIASQQDLHTAQFFEILKQMGFDWAKNLEHVNFGMVQGMSTRKGTV-VFLDNILEET 440

Query: 393 RDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKE 448
           +D M   M K    +  +     + D +G  +V    +  K     +F + ++   +   
Sbjct: 441 KDKMHEVMKKNETKYAQIEDPEKIADLIGVSAVMIQDMQSKRINNYEFKWERMLSFEGDT 500

Query: 449 NPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            P  Y+QYA++R  S+ R+A   ++   + +FDL            +   +Q++  LA+Y
Sbjct: 501 GP--YLQYAHSRLSSVQRKAGISEEKLKEANFDLLT----------EPCAVQMVRVLAQY 548

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +I+ A    EP  +  YL++L  +    +        + +V     +L   RL L  A
Sbjct: 549 PDIIKKALKTSEPSTIVTYLFNLTHLVSTCYD-------ILWVAGQEEELATARLALYAA 601

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +G+ ++G+     M
Sbjct: 602 AKQVLYNGMVLLGLTPVERM 621


>gi|295131647|ref|YP_003582310.1| arginine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376321|gb|ADE00176.1| arginine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 556

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 31  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 90

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 91  SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 147 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 206

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 207 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 260

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 261 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 302

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 303 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 361

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 362 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 419

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 420 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 477

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 478 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 530

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 531 LALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|313808398|gb|EFS46865.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313818180|gb|EFS55894.1| arginyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821038|gb|EFS58752.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824084|gb|EFS61798.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313827170|gb|EFS64884.1| arginyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314927063|gb|EFS90894.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314961885|gb|EFT05986.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314979613|gb|EFT23707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314988349|gb|EFT32440.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990245|gb|EFT34336.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315083838|gb|EFT55814.1| arginyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087297|gb|EFT59273.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089715|gb|EFT61691.1| arginyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327326622|gb|EGE68410.1| arginine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327449559|gb|EGE96213.1| arginyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|328757404|gb|EGF71020.1| arginyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
          Length = 582

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|159035826|ref|YP_001535079.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157914661|gb|ABV96088.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 572

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 247/607 (40%), Gaps = 121/607 (19%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     +AA+ L+R LG  P  IA  ++ ++++     +V ++G GFINL ++ S 
Sbjct: 28  RRSQHADYQCDAALSLARRLGRRPRDIAAEVLGQVELADLCSAVAVSGPGFINLTVADSA 87

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L  +LS+  V     G         V +++ S N    MHVGH R  V+GD    L+ + 
Sbjct: 88  LGTLLSTAAVDS-RLGVAPSAATETVIVDYSSPNVAKEMHVGHLRGTVIGDAAVRLLEWR 146

Query: 158 GYEVTREYYINDAGAQINTL--------------ALSV-----FWRYQQALYNNDSDLPE 198
           G++V +  ++ D G     L               LSV     F++  +  ++ D    E
Sbjct: 147 GHQVIKANHLGDWGTPFGMLIEHLLDLGESEAADELSVGDLDSFYKAARVKFDADDAFRE 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G EL  +    LL    EK+   V D                   Q  +
Sbjct: 207 RAQRRVVALQRGDELTLRL-WRLLVAESEKYFLTVYD-------------------QLGV 246

Query: 259 FISEDDFHRGDP------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            ++E DF RG+       +P+ D +D L        G+L   +      C       +F 
Sbjct: 247 LLTERDF-RGESYYNEQLAPVTDELDRL--------GLL---RESGDAAC-------VFP 287

Query: 313 STMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367
           +  VG D  +PL     K DG + Y A DLA  + + +  G   ++YV+G     + + +
Sbjct: 288 AGFVGRD-GQPLPIIVRKRDGGFGYGATDLAAIRHRTQDLGATRLLYVVGLPQRQHFELV 346

Query: 368 EAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
            AVA  A      A+   L    + L  DG  ++   R GD I L  +++E         
Sbjct: 347 YAVAWQAGWLSPPARAEHLGFGSI-LGSDGKMLR--SRTGDSIKLVGLLEEAVTRAAELA 403

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             VG  ++++  L    ++   FD+ ++      N   Y+QYA+
Sbjct: 404 RQKNPDLSATEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLDG-NTAPYLQYAH 462

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR RSIFR+A       + + F    I   +    +E  L + LA +  V+ +     + 
Sbjct: 463 ARIRSIFRRA-------EIEQFTPTPI---TVGHPAEHALALELAGFGAVVASVEQTLQF 512

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           ++LA YL+ LA+ F G + H    P LR   A        RL L    A ++  GL ++G
Sbjct: 513 HRLAGYLHTLATTFSGFYEH---CPVLRAEDAVRDS----RLALCDLTARVLRQGLYLLG 565

Query: 579 VESPNEM 585
           + +P+ M
Sbjct: 566 IATPDRM 572


>gi|329116706|ref|ZP_08245423.1| arginine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907111|gb|EGE54025.1| arginine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 562

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 249/599 (41%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P++   G L+   A  L++ L   P  IA  +    KI+ D     +A   +IN +
Sbjct: 26  LIETPKNSEMGDLAF-PAFSLAKVLRKAPQMIASDLAE--KINADQFEKVVAIGPYINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ S + + ++  ++    ++G+  IG G  + ++  S N   P  VGH R  V+GD++A
Sbjct: 83  LNKSLISQDVMKDVITEKADFGQQHIGDGQNITLDMSSPNIAKPFSVGHLRSTVIGDSIA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           SL +  GY + R  ++ D G Q   L ++   W   +A+  +    P      +Y++ + 
Sbjct: 143 SLYSKLGYNLFRINHLGDWGKQFGMLIVAYKLWGDPKAVEAD----PIAELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD--------LKALNIQHDIFI 260
            E  +K     L+    +W   ++D   +A  + +  RD+         + LNI  D + 
Sbjct: 198 AEAEEKPE---LDEEARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYEKLNITFDHYH 254

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++           D +     + E       SK  +  D+++  L           
Sbjct: 255 GEAFYN-----------DKMDEGLQILEDKNLLHDSKGAKIVDLEKYNL----------- 292

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAV-- 374
             P L  KSDG+  Y   D+A    + +R FD    IYV+G + S + K+L+AV   +  
Sbjct: 293 -PPALIKKSDGATLYITRDMATAMYR-KRTFDFVKNIYVVGQEQSHHFKQLKAVLKEMGF 350

Query: 375 --SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
             S+    ++  L    +        K+S R G+ I L   +DE                
Sbjct: 351 DWSDDMVHVSFGLVTKNKK-------KLSTRKGNIILLEPTLDEAVSRALTQIEAKNPDL 403

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFR 466
                    VG  +++F  L        DFD    V  + +  P  YVQYAYAR +SI R
Sbjct: 404 ENKEEVAKQVGIGAIKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILR 461

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A           F  +     S  DT   ++I  +  + + I+ A    +P  +A Y  
Sbjct: 462 KAN----------FTPDASANYSLKDTESWEIIKLIQAFSKTIQRAAEKYDPSTIAKYAI 511

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  F+ +++H          +++ R     RL L ++   ++   L ++GVE+P +M
Sbjct: 512 QLAQAFNKYYAHTH-----ILDESDERD---SRLALCYSTGIVLKEALRLLGVEAPEKM 562


>gi|323349209|gb|EGA83439.1| YDR341C-like protein [Saccharomyces cerevisiae Lalvin QA23]
          Length = 607

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 227/545 (41%), Gaps = 93/545 (17%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FI  + +P +L K ++  I+    +YG   + +  KV IEF S N   P H GH R  ++
Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  LA+L    G+EV R  Y+ D G Q   LA+  F RY  ++AL  +    P  +   V
Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223

Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y++ + K++ ++  S               + +   +E+ L I K +   ++ K I D  
Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             LNI++D++  E    +     +   ID    +G  +E                D+  +
Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322

Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
           L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV+ S    H+   
Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     + K L+ V       +S +K  + V L  ++   ++ M   M K    + 
Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441

Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            + H   V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R RS+
Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499

Query: 465 FRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R A  I    + + DF L            + +   LI  L +YP V+ NA    EP  
Sbjct: 500 ERNASGITQXKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ L       +        + +V     +L   RL L  A   ++ +G+ ++G+ 
Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602

Query: 581 SPNEM 585
               M
Sbjct: 603 PVERM 607


>gi|227530448|ref|ZP_03960497.1| arginyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227349626|gb|EEJ39917.1| arginyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 566

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 260/604 (43%), Gaps = 116/604 (19%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IERP+D  +G  +      L++ L   P  IA  ++ +I      D V +AG  +IN +L
Sbjct: 27  IERPKDSNNGDYAF-PTFFLAKSLHKAPQMIASELIEKID-QTGFDKVVVAGP-YINFFL 83

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +   +L +I+     YG + +G    V I++ S N   PM +GH R  ++G+ +A 
Sbjct: 84  DKANVGAGVLETILNDPEHYGESDLGHKANVTIDYSSPNIAKPMGMGHLRSTMIGEAIAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINT-LALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207
           ++    Y + R  Y+ D G Q    +A    W   Q + +     P      +Y++    
Sbjct: 144 ILEKVNYNLIRIDYLGDWGTQFGKMMAAYKMWGDSQEVQDGLKSDPINTLLQLYVRINTE 203

Query: 208 --------HVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALNIQHD 257
                     G+E    + ++L +  EE W      ++ S++   ++       L+++ D
Sbjct: 204 ADEHPEYTDAGRE----WFAKLEHGDEEAWRLWHWFREISLERFQRV----YDMLDVKFD 255

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            F  E    +    PI+ + D         +G+L   KS+  +  D+++  L        
Sbjct: 256 SFNGEAFSAQKMEEPIQLLRD---------KGLL--KKSRGAEIVDLEQFNL-------- 296

Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                PLL  KS+G+ TY   DLA   + K  Y  G    +YV+G++   Y K+L     
Sbjct: 297 ----PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQEVYFKQLRMALK 350

Query: 373 AVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------- 415
            +      QI  +   L+ L  +G   KMS R G+ ++L  V++                
Sbjct: 351 ELGFNWWDQIEHISFGLMNL--NGQ--KMSTRKGNVVSLEDVLNDSVDLARKQIAEKNPD 406

Query: 416 ---------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRS 463
                    +VG  +V F  L  +R+N+  ++F     VK + +  P  YVQYA AR  S
Sbjct: 407 LKNADEVAKQVGIGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP--YVQYARARAES 462

Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           I R+   +D F D+D            ++      +LI  L++Y   ++ A +  +P  +
Sbjct: 463 ILRKGGIRD-FSDVDL-----------TQVGDGAWELISFLSQYGEAVKRAALNYDPSVV 510

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R          N+      RL L  AV+ ++ S L ++ V++
Sbjct: 511 AKYALELAKKFNQYYAHNR--------ILNDDPQQPARLALTQAVSHVLKSALALLDVKA 562

Query: 582 PNEM 585
           P+EM
Sbjct: 563 PDEM 566


>gi|332994027|gb|AEF04082.1| arginyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 576

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 246/595 (41%), Gaps = 84/595 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I + R      G    N AM L++ L   P  IAE IV  +K+D     + +AG GFIN+
Sbjct: 25  IPVSRSARPEFGEYQFNGAMALAKQLRQKPRDIAEKIVEIVKLDDVASKLEVAGPGFINV 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +L+  +L    ++     +   R  + K  +  V +++ S N    MHVGH R  ++GD 
Sbjct: 85  HLNNEWL----ANQCELALHDPRIGVAKSPEQTVVVDYSSPNLAKEMHVGHLRTTIIGDA 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +  ++ F G++V R+ ++ D G Q   L   +  + +Q +                    
Sbjct: 141 VVKVLEFLGHKVIRQNHMGDWGTQFGMLLAHLSDKLEQEVAET----------------A 184

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFI--SEDD 264
             +L D Y    + F +E+      D + + ++K+   D K L++     D+ I  SED 
Sbjct: 185 LSDLEDFYREAKVRFDDEEGFA---DRAREYVVKLQGGDEKCLSLWEKFIDVSIAHSEDV 241

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           + + + S  R  I   +   +    ++   K K     D    Q++F   +  D    P 
Sbjct: 242 YKKLNVSLTRADIMGESAYNHDLANVISELKEKGIAVEDQG-AQVVFIPEL-ADKEGNPA 299

Query: 325 L----KSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           +    KS G Y Y   DLA    +Y  G    D  + +  +  + + K+ E V       
Sbjct: 300 VYIVQKSGGGYLYATTDLAAM--RYRSGTLNADRTLILTDARQALHFKQTEIVGRKAGFM 357

Query: 378 KAQINVLLCEL-VRLYRDGMPIKMS---------------KRAGDFIT----------LR 411
           +       C   + L  DG P K                 +RAG  I           L 
Sbjct: 358 EEAQTYEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEAVERAGKLIAERDNDLSADELA 417

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKD 470
            V  +VG  +V++  L +  +   D+ F      S E N   Y+QYAY R +S+FR+A  
Sbjct: 418 EVARKVGIGAVKYADLSKNRT--TDYMFNWDTMLSFEGNTAPYLQYAYTRVKSLFRKAGV 475

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               +  D+   N++ ++      E  L V L ++  V+   +    P+ L  YLY+LAS
Sbjct: 476 AIETMPVDI---NIVEKQ------EHALSVLLLQFEEVVGLVSRDATPHVLCTYLYELAS 526

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F   +      P L+       K+   RL L   VAS ++ GLN++G+E+  +M
Sbjct: 527 AFMSFY---EACPMLK--DGIELKVRDSRLALSALVASTLSQGLNLLGIETLEKM 576


>gi|145627706|ref|ZP_01783507.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979481|gb|EDJ89140.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 577

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 239/594 (40%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   +AM K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRAMWKRLVDITMQQN-QHNYARLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RIGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|320539876|ref|ZP_08039535.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030062|gb|EFW12082.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 576

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 244/586 (41%), Gaps = 89/586 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G+   N  M  ++ LG+ P  +AE ++  +++      V IAG GFIN++L+ ++L + +
Sbjct: 37  GNYQVNGVMSAAKKLGMPPRQLAEKVLQLLELGDIASKVEIAGPGFINIFLNSAWLARQI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              V++  E G   +   T V I++ + N    MHVGH R  ++GD  A  + F G+ V 
Sbjct: 97  D-WVLNAPELGVTAVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+        Y +      A K+  E 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDMGLSDLEQFYRQ------AKKHYDED 203

Query: 222 LNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNI----QHDIFISEDDFHRGDP--- 270
             F       +VK    D   Q M + + D   A N     + ++ ++E D   G+    
Sbjct: 204 SEFAARARAYVVKLQGGDPYCQKMWRKLVDITMAQNQLTYNRLNVTLTEGDV-MGESLYN 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + +  I+ +L  +G   E       S+      +D  Q        G+ +   + K DG 
Sbjct: 263 AMLPGIVADLKAKGLAVE-------SEGATVVFLDEYQ-----NKDGEPMGVIIQKKDGG 310

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386
           Y Y   DLA  K +YE  G + ++Y   S    ++ +  A+   A  V E  +  + L  
Sbjct: 311 YLYTTTDLACAKYRYETLGANRVLYYTDSRQHQHLMQAWAIVRKAGYVPESVSLEHHLFG 370

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
            +  L +DG P K   RAG  + L  ++DE                           VG 
Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLSDLLDEAIERAGQLIAGKNPHMPAQEITQLARVVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    FD+  +    + N   Y+QYAY R  S+F++A      L   L
Sbjct: 427 GAVKYSDLSKSRTTDYIFDWNNMLA-FEGNTAPYMQYAYTRIVSVFKRAGIDESSLTLPL 485

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V+ +E      E+ L   L ++   +        P+ +  YLY+LA +F   + H 
Sbjct: 486 ----VMSEE-----HEIALATRLLQFEEALTAVAREGTPHIMCSYLYELAGLFSSFYEH- 535

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +  ++  +   RL+L    +  + +GL+ +G+E+   M
Sbjct: 536 -----CQILNGDSEAVRQSRLKLALLTSRTLKTGLDTLGIETVERM 576


>gi|313123500|ref|YP_004033759.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280063|gb|ADQ60782.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 565

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 150/604 (24%), Positives = 258/604 (42%), Gaps = 113/604 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERP+D   G  +      L++ +   P  IA  +    KID        A   +IN 
Sbjct: 25  VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L  S     IL  I+     YG   +G G  V+ E+ S N   PM +GH R  ++G+ +
Sbjct: 82  FLDKSQTGAAILREILADPENYGARDLGHGRNVSTEYSSPNIAKPMGMGHLRSTMIGEAI 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203
           A ++A  G++  R  Y+ D G Q   +  +        ++ ND+D+ +        YY  
Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193

Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           V +    +E  +      ++ S+L +  EE  +     ++ S++   K+       L++ 
Sbjct: 194 VRINREAEEHPEYDEEGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YNMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+     + R+    +G+L   KS+  +  D+++  L      
Sbjct: 250 FDSFTGEAFSAQMMDEPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  PL+  KS+G+ TY   DLA   Y K  Y  GF   IYV+G +   Y ++L A 
Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +    A  +++      +  +G   KMS R G+ + L  V++E              
Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401

Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  +R+N   +DF+  + VK + +  P  YVQY+ AR  
Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--VDFNLEEVVKFEGETGP--YVQYSRARGE 457

Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+ R++    F D D            ++    E  L+  +  Y   I+ A    +P  +
Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMGRYADTIQKAMETYDPSAI 506

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++ V++
Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561

Query: 582 PNEM 585
           P+EM
Sbjct: 562 PDEM 565


>gi|183598986|ref|ZP_02960479.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827]
 gi|188021202|gb|EDU59242.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827]
          Length = 576

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 238/578 (41%), Gaps = 73/578 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G++P  +AE IV+ + ++     V IAG GFIN++L PS+L   +
Sbjct: 37  GDYQANGVMGAAKKMGINPRQLAEQIVSHLDLEGIASKVEIAGPGFINIFLEPSWLTTQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              +      G + + K   + I++ + N    MHVGH R  ++GD  A  + F G++V 
Sbjct: 97  EQALTCD-RLGLSSV-KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L       Y + + N N SD+        Y     +E    Y S+ 
Sbjct: 155 RANHVGDWGTQFGMLIA-----YLEKMQNENASDMALADLEEFY-----REAKQHYDSDE 204

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           + F E     +VK  S     + +   L  + +Q +    ++ + R + +   D +   +
Sbjct: 205 V-FAERARGYVVKLQSGDEYCRKMWRKLVDITMQQN----QETYRRLNVTLTEDDVMGES 259

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADL 338
               +  GI+   K+K     + +   +++     T  G+ +   + K DG + Y   D+
Sbjct: 260 LYNDMLPGIVADLKAKGL-AVESEGATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDI 318

Query: 339 AYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRD 394
           A  K ++E    D  +Y + S    ++ +   +   A  + E  +  + +   +  L +D
Sbjct: 319 ACAKYRHEVLHADRALYYIDSRQHQHLMQAWTIVRKAGYIPESMSLEHHMFGMM--LGKD 376

Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMML 427
           G P K   R+G  + L  ++DE                           VG  SV++  L
Sbjct: 377 GKPFK--TRSGGTVRLSDLLDEAIERAQVLIRSKNPDMPEDELNNVANVVGIGSVKYADL 434

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +  +    FD+  +    + N   Y+QYAY R  SIF++A     DL   +  +     
Sbjct: 435 SKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKKANVTQADLTLPIVLQ----- 488

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               D  E+ L   L ++   I        P+ +  YLYDLA +F   + H         
Sbjct: 489 ----DPREIALATRLMQFEETILMVARDGTPHVMCAYLYDLAGLFSSFYEH------CPI 538

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A +      RL+L       + +GL+ +G+++   M
Sbjct: 539 LSAEDEAQRQSRLKLALLTQKTLKAGLDTLGIDTVERM 576


>gi|283798365|ref|ZP_06347518.1| arginine--tRNA ligase [Clostridium sp. M62/1]
 gi|291073949|gb|EFE11313.1| arginine--tRNA ligase [Clostridium sp. M62/1]
          Length = 628

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 136/608 (22%), Positives = 256/608 (42%), Gaps = 87/608 (14%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           ++K +   V  RP  C +     N AM  ++     P+ IA  +V + K       +   
Sbjct: 61  DEKYVKVTVSNRPDLCEY---QCNGAMAAAKAYKKKPIDIANEVVEKAKESRMFSEIGAV 117

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             GFINL +SP YL   ++ +     +YG         + I++  AN   P+HVGH R A
Sbjct: 118 MPGFINLRISPEYLAGYMNEMAADE-KYGLEETKAPETIIIDYGGANVAKPLHVGHLRSA 176

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP 197
           V+G+++  +  + G+ V  + ++ D G Q+  +   +  R  +  Y ++S       + P
Sbjct: 177 VIGESIKRISRYMGHHVISDVHLGDWGLQMGLIIEELHDRQPELPYFDESFTGEYPEEAP 236

Query: 198 ------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDL 249
                 E  YP    K    E   + + E     +  + P   +  + +   +K ++ + 
Sbjct: 237 FTISELEEIYPAASAKSKVDEAFKERAQEATFKLQSGYAPYRAIWKHIMNVSLKDLKRNY 296

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRK 307
             LN+  D++  E D     P+ I+D+ID    +G  YE  G L    ++ T     D K
Sbjct: 297 GNLNVSFDLWKGESDAQPYIPALIQDLID----KGLAYESQGALVVDIAEET-----DSK 347

Query: 308 QLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGY 363
           +L             P +  KSDG+  Y  +DLA    + E+ F  D  IYV+      +
Sbjct: 348 EL------------PPCIVRKSDGAALYATSDLATI-VQREQDFHPDRYIYVVDKRQELH 394

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             ++  VA      K    ++      +  +DG P K   R G  + L H++DE+  +  
Sbjct: 395 FTQVFRVAKKAGIVKDDTKMIFLGFGTMNSKDGGPFKT--RDGGVMRLEHLIDEIDEEVY 452

Query: 423 RFMM--------LWRKNSELLDFDFCK---VKEQSKENPVF--------------YVQYA 457
           R +           R+ +E++     K   +  Q+ ++ VF              ++QY 
Sbjct: 453 RKIQEKQRVPEEEMRRTAEMIGLAALKYGDLSNQATKDYVFDVDRFISFEGNTGPHIQYM 512

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R +SI  +  ++     + L P  + P  SE   +E +L + L  +  V+E+A     
Sbjct: 513 VVRIKSILEKYGELMGGT-YSLIP--IRPAASE---TEKKLQLELCRFGEVVESAFAETA 566

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+++  Y+YDL+  F+  +         + +   +R+     + L+     ++N+ ++++
Sbjct: 567 PHRICQYMYDLSDAFNNFYLVN------KIIGEEDREKQAGFISLISLTKDVLNACMDLL 620

Query: 578 GVESPNEM 585
           G+E+P  M
Sbjct: 621 GMEAPEHM 628


>gi|148826102|ref|YP_001290855.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229847101|ref|ZP_04467206.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166232791|sp|A5UCH1|SYR_HAEIE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148716262|gb|ABQ98472.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229809930|gb|EEP45651.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 577

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 139/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   +AM K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQGGDEYCRAMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVEDDGALVVYLDEFKNK--------------EGDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKQ 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                +G  SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF + +  
Sbjct: 419 AVIEAIGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKTE-- 475

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                    P  +       D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 476 INSTALLAAPLTIK------DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLELLGIKTVEKM 577


>gi|17231209|ref|NP_487757.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|23822197|sp|Q8YQU9|SYR_ANASP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17132851|dbj|BAB75416.1| arginyl-tRNA-synthetase [Nostoc sp. PCC 7120]
          Length = 588

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 241/596 (40%), Gaps = 100/596 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG  P  IA  IV ++ +    +   IAG GFINL L  +YL   L
Sbjct: 40  GDYQANVALSLSKKLGQQPRAIASAIVEKLDVSEICEKPEIAGPGFINLKLKTAYLEAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++I  +    G        +  ++F S N    MHVGH R  ++GD++A ++ F G++V 
Sbjct: 100 NTIQ-ADTRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--- 219
           R  ++ D G Q   L                           YL+ V  E     ++   
Sbjct: 159 RLNHVGDWGTQFGMLI-------------------------TYLREVSPEALTTANALDI 193

Query: 220 -ELLNFPEEKWLPIVKDYSVQ--AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRD 275
            +L++F  +       D + Q  A  +++R    A +  H    + E    R +   I D
Sbjct: 194 GDLVSFYRQAKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQS--RQEFQVIYD 251

Query: 276 IID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-----PLL--KS 327
           ++D  L  +G  +   L P   +  +K  +  +    +   +    +R     PL+  KS
Sbjct: 252 LLDVKLTERGESFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKS 311

Query: 328 DGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG Y Y   DLA  + + ++     +IY+  +  + +  +   VA     +KA       
Sbjct: 312 DGGYNYATTDLAALRYRIQKDEAKRIIYITDAGQANHFAQFFQVA-----RKAGWIPDDV 366

Query: 387 ELVR------LYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           ELV       L  DG   K   R+GD + LR ++DE                        
Sbjct: 367 ELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDEAISRAHADVEVRLKAEEREETAEF 424

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    F + K+ +  K N   Y+ YAYAR + I R+ +
Sbjct: 425 IDKVAEVVGISAVKYADLSQNRTSNYIFSYDKMLD-LKGNTAPYMLYAYARIQGISRKGE 483

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F DL  +   + ++  E+EF      L  +L +   VI        P +L  YLY+L+
Sbjct: 484 INFADLGDN--AKVILQHETEF-----ALAKYLLQLGEVISTVEEDLSPNRLCEYLYELS 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+  +     N  ++ + A    L   RL L    A  +  GL+++G++    M
Sbjct: 537 KRFNAFYDR---NQGVQVLSAEE-PLRTSRLVLCDLTARTLKLGLSLLGIQVLERM 588


>gi|6320548|ref|NP_010628.1| hypothetical protein YDR341C [Saccharomyces cerevisiae S288c]
 gi|2501051|sp|Q05506|SYRC_YEAST RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|5821887|pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase
 gi|14719542|pdb|1F7U|A Chain A, Crystal Structure Of The Arginyl-Trna Synthetase Complexed
           With The Trna(Arg) And L-Arg
 gi|14719544|pdb|1F7V|A Chain A, Crystal Structure Of Yeast Arginyl-Trna Synthetase
           Complexed With The Trnaarg
 gi|1230668|gb|AAB64777.1| Ydr341cp [Saccharomyces cerevisiae]
 gi|256269806|gb|EEU05069.1| YDR341C-like protein [Saccharomyces cerevisiae JAY291]
 gi|285811358|tpg|DAA12182.1| TPA: hypothetical protein YDR341C [Saccharomyces cerevisiae S288c]
          Length = 607

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 227/545 (41%), Gaps = 93/545 (17%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FI  + +P +L K ++  I+    +YG   + +  KV IEF S N   P H GH R  ++
Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  LA+L    G+EV R  Y+ D G Q   LA+  F RY  ++AL  +    P  +   V
Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223

Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y++ + K++ ++  S               + +   +E+ L I K +   ++ K I D  
Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             LNI++D++  E    +     +   ID    +G  +E                D+  +
Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322

Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
           L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV+ S    H+   
Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     + K L+ V       +S +K  + V L  ++   ++ M   M K    + 
Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441

Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            + H   V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R RS+
Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499

Query: 465 FRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R A  I    + + DF L            + +   LI  L +YP V+ NA    EP  
Sbjct: 500 ERNASGITQEKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ L       +        + +V     +L   RL L  A   ++ +G+ ++G+ 
Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602

Query: 581 SPNEM 585
               M
Sbjct: 603 PVERM 607


>gi|28897635|ref|NP_797240.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838587|ref|ZP_01991254.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260365999|ref|ZP_05778484.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878212|ref|ZP_05890567.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895648|ref|ZP_05904144.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31076998|sp|Q87RD6|SYR_VIBPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28805847|dbj|BAC59124.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748005|gb|EDM58864.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088188|gb|EFO37883.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308090109|gb|EFO39804.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308111274|gb|EFO48814.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 577

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 138/603 (22%), Positives = 237/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +  S +    E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  DAALADSRLGVAAEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214
           G++V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A
Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208

Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261
            K  + ++       F  E W  +V    +Q         + + RDD+   ++ +D+   
Sbjct: 209 VKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDM--- 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318
                      +  I+ +L  QG   E                D  Q++F        G+
Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 300 AMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  K
Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409

Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462
           N EL           +     K  + SK                  N   Y+QYAY R  
Sbjct: 410 NPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF +A     +L  D+            D  E  LI  L ++   +++     +P+ + 
Sbjct: 470 SIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           + A +  +   RL+L    A  I  GL+++G+E+ 
Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIETL 574

Query: 583 NEM 585
             M
Sbjct: 575 ERM 577


>gi|54308257|ref|YP_129277.1| arginyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400047|sp|Q6LTA1|SYR_PHOPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46912685|emb|CAG19475.1| putative arginyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 576

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 134/601 (22%), Positives = 233/601 (38%), Gaps = 119/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL---- 98
           G    N  M +++ LG +P   A+ ++  + +D   + V IAG GFIN++L  S+L    
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVIDVLDLDGIAEKVEIAGPGFINIFLDKSWLAARA 96

Query: 99  -RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +    +    E  +N++       +++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EEALTDDRIGVAAEKQQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G+ V R  +I D G Q   L                    L  F+R  + LY+ D +   
Sbjct: 150 GHNVVRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLYDEDEEFAV 209

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V    V  +  D+Y +E+       W  +V    VQ  +                
Sbjct: 210 RARAFV----VKLQSGDEYCAEM-------WKKLVDVTMVQNQI---------------- 242

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STM 315
                ++ R + S  RD +   +   Y+  GI+   K K     + D  Q++F       
Sbjct: 243 -----NYDRLNVSLTRDNVMGESMYNYMLPGIVADLKEKGL-AVESDGAQVVFLDEYKNK 296

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            GD +   + K DG + Y   D+A  K ++E+   D ++Y + S    ++ +  ++    
Sbjct: 297 DGDPMGVIIQKRDGGFLYTTTDIACAKYRFEQLNADRVLYFIDSRQHQHLMQAWSIVRKA 356

Query: 375 SEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
                ++ +      + L +DG P K   RAG  + L  ++DE                 
Sbjct: 357 GYVPEEVTLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDESEVRAAKLIEAKNPDLD 414

Query: 417 ----------VGSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                     V   +V++  L   R    + D+D     E    N   Y+QYAY R  SI
Sbjct: 415 TAEKDKIAKTVAMAAVKYADLSKHRTTDYIFDWDNMLAFEG---NTAPYMQYAYTRVASI 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F++A     DL   +            D  E  L+  L ++   + N +   +P+ +  Y
Sbjct: 472 FKRADVNLADLTHPIVIN---------DEKEQALLSTLLQFEEAVLNVSREGQPHLMCTY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA  F   +      P L   +A    +   RL+L    A  I  GL+++G+E+   
Sbjct: 523 LFELAGKFSSFYEAC---PILNAEEA----VKQSRLKLALLTAKTIKQGLDLLGIETLER 575

Query: 585 M 585
           M
Sbjct: 576 M 576


>gi|259145577|emb|CAY78841.1| EC1118_1D0_6315p [Saccharomyces cerevisiae EC1118]
          Length = 607

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 226/545 (41%), Gaps = 93/545 (17%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FI  + +P +L K ++  I+    +YG   + +  KV IEF S N   P H GH R  ++
Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  LA+L    G+EV R  Y+ D G Q   LA+  F RY  ++AL  +    P  +   V
Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223

Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y++ + K++ ++  S               + +   +E+ L I K +   ++ K I D  
Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             LNI++D++  E    +     +   ID    +G  +E                D+  +
Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322

Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
           L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV+ S    H+   
Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     + K L+ V       +S +K  + V L  ++   ++ M   M +    + 
Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKRNENKYA 441

Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            + H   V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R RS+
Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499

Query: 465 FRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R A  I  D     DF L            + +   LI  L +YP V+ NA    EP  
Sbjct: 500 ERNASGITQDKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ L       +        + +V     +L   RL L  A   ++ +G+ ++G+ 
Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602

Query: 581 SPNEM 585
               M
Sbjct: 603 PVERM 607


>gi|332676510|gb|AEE73326.1| arginine--tRNA ligase [Propionibacterium acnes 266]
          Length = 556

 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 31  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 90

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 91  SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 147 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLYQDSKKTFDADPQFADRARR 206

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 207 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 260

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 261 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 302

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 303 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 361

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 362 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 419

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 420 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 477

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 478 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 530

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 531 LALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|260772372|ref|ZP_05881288.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611511|gb|EEX36714.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 577

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 237/591 (40%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG++P   A+ ++  + +D       IAG GFIN++LS ++L +  
Sbjct: 37  GDYQANGVMGVAKQLGMNPREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSETFLAQ-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + + ++    G N     T V +++ + N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 96  AELALADAHLGVNKAEPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           R  +I D G Q   L  ++    QQ+  +    +DL   Y     L    +E A K  + 
Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQQSGEVSMELADLEAFYRESKTLYDEDEEFAAKARNY 214

Query: 221 LLN------FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++       F  E W  +V    +Q                     ++ ++ R + S  R
Sbjct: 215 VVKLQSGDAFCLEMWKKLVDVTMIQ---------------------NQQNYDRLNVSLSR 253

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSY 331
           D +   +    +  GI+   K K   + D D  Q++F        G+ +   + K DG +
Sbjct: 254 DNVMGESMYNDMLPGIVADLKEKGIAQED-DGAQVVFLDEYKNKDGEPMGVIIQKRDGGF 312

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383
            Y   D+A  K +YE  G D ++Y + S    +       V++   +   VS +     +
Sbjct: 313 LYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPEHVSLEHHAFGM 372

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +L       +DG P K   RAG  + L  ++DE                           
Sbjct: 373 MLG------KDGRPFK--TRAGGTVRLADLLDEAQVRAAALIEAKNPDLTAEEKTSIATT 424

Query: 417 VGSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           V   +V++  L   R    + D+D     E    N   Y+QYAY R  SIF +A      
Sbjct: 425 VAMAAVKYADLSKHRTTDYIFDWDNMLAFEG---NTAPYMQYAYTRVASIFAKA-----G 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +  D     +I  E +    E  LI  L ++   ++      +P+ +  YL++LA  F  
Sbjct: 477 ISMDELTGQIIIGEEK----EKALIAKLLQFEEAVQAVAREGQPHIMCSYLFELAGQFSS 532

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           + A+N +    RL+L    A  I  GL+++G+ +   M
Sbjct: 533 FYE------ACPILVASNEESKQSRLKLAALTAKTIKQGLDLLGINTLERM 577


>gi|284007623|emb|CBA73252.1| arginyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 576

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 149/597 (24%), Positives = 250/597 (41%), Gaps = 96/597 (16%)

Query: 36  RPRDCAH-GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           RP   A  G    N  M  ++ +G+ P  +AE ++  +K++     V IAG GFIN++L 
Sbjct: 29  RPSTKAQFGDYQANGVMSAAKKIGIPPRQLAEKMLPLLKLENIASKVEIAGPGFINIFLD 88

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             ++ K +  + +   +   N +   T + I++ + N    MHVGH R  ++GD +A  +
Sbjct: 89  KQWIAKQIE-LTLQHEKLAINSVTPQTII-IDYSAPNVAKQMHVGHLRSTIIGDAVARTL 146

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            F G++V R  +I D G Q   L ++   + QQ    N +++        Y +      A
Sbjct: 147 EFLGHKVIRANHIGDWGTQFGML-IAYLEKVQQ---ENATNMALADLETFYRE------A 196

Query: 215 DKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH----DIFISEDDFH 266
            K+  E  NF E     +VK    D   + M   + D   A N Q     ++ ++EDD  
Sbjct: 197 KKHYDEDENFAELARNYVVKLQSGDEYCRKMWHKLVDITMAQNQQTYQRLNVTLTEDDV- 255

Query: 267 RGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            G+    + + DI+ +L  +G   E       S       +D     F++   GD +   
Sbjct: 256 MGESLYNNMLPDIVADLTAKGLAVE-------SDGAMVVYLDE----FKNK-DGDAMGVI 303

Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI- 381
           + K DG Y Y   D+A  K ++E    D ++Y   S    ++ +    A A+  K   I 
Sbjct: 304 IQKKDGGYLYTTTDIACAKYRHEILHADRVLYYTDSRQHQHLMQ----AWAIVRKAGYIP 359

Query: 382 NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
           + +  E     + L +DG P K   RAG  I L  ++DE                     
Sbjct: 360 DTMSLEHHMFGMMLGKDGKPFK--TRAGGTIRLADLLDEAIERAAHLIRQKNSAMPEKEL 417

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF++AK 
Sbjct: 418 QSIIQAVGIGAVKYADLSKNRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVASIFKRAK- 475

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDL 528
                   + P  +       +  E  L + L ++   I   T+A+E  P+ +  YLYDL
Sbjct: 476 --------INPATLTAPVILANEYEQVLAIRLLQFEETI--LTVAREGLPHIMCSYLYDL 525

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F   + H         + A N      RL+L       +  GL+ +G+E+   M
Sbjct: 526 AGLFSSFYEH------CPILNAENDASKQSRLKLALLTQKTLKIGLDTLGIETVERM 576


>gi|156552067|ref|XP_001604592.1| PREDICTED: similar to arginyl-tRNA synthetase [Nasonia vitripennis]
          Length = 670

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 144/612 (23%), Positives = 262/612 (42%), Gaps = 107/612 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG-------LDPLTIAELIVARIKIDPDVDSVFIA 84
           +VI    +   G    N+A+ L + LG       + P  IA+ I+ ++   P V+ + +A
Sbjct: 108 VVISSSNNPKFGDYQCNSALPLCKLLGSASQGKKVSPREIADKIILKVASSPLVEKLEVA 167

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN+YL   + + IL++I+  G      ++ K  ++ ++F S N    MHVGH R  
Sbjct: 168 GAGFINIYLKREFGQAILANILKHGKVLSPPVVQK-RRILVDFSSPNVAKEMHVGHLRST 226

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           ++GD++A L+ F G++V R  +I D G Q   L   +    +    N  ++ P    P  
Sbjct: 227 IIGDSIARLLEFLGHDVLRINHIGDWGTQFGMLIAHL----EDKFPNYTTESP----PIS 278

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-----VQA---MMKIIRDDLKALNIQH 256
            L+   KE   ++  E   F +  +  +VK  +     +QA   +  + R + +++  + 
Sbjct: 279 DLQSFYKESKVRF-DEDEEFKKRAYACVVKLQAHEPKYIQAWKLICDVSRKEFQSIYNRL 337

Query: 257 DIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DI + E    RG+    S ++DI+  L  + ++ E              D  RK      
Sbjct: 338 DIKLIE----RGESFYHSRMKDIVKELEEKNFLEE--------------DEGRK------ 373

Query: 314 TMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEA 369
            M G++   +   ++K DG +TY  +D+A  K +  E   + +IYV+ +  + + + +E+
Sbjct: 374 IMWGENREGIPLTIVKRDGGFTYDTSDMAAIKHRIVEEKAEWVIYVVDAGQATHFQIMES 433

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPI-----KMSKRAGDFITLRHVVDEVGSDSVRF 424
            A     ++A+I VL C  +     G+ +     K   R+GD + L  ++DE    + + 
Sbjct: 434 CA-----RRARI-VLSCHNIDFVGFGVVLGEDKKKFKTRSGDTVKLSQLLDEGLKRAEQK 487

Query: 425 MMLWRKNSELLDFDFCKVKE----------------------------QSKENPVFYVQY 456
           +M   ++  L   +F K KE                            + K N   Y+ Y
Sbjct: 488 LMEKERDKVLTKEEFNKAKESIAYGCIKYADLCHNRNHDYVFSFDKMTEDKGNTAVYLLY 547

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A  R RSI R A     ++  +   +  I  E E    E +L   L ++P VI   T   
Sbjct: 548 ALTRIRSIARTANVSREEMQ-EAIGKTPISLEHE---KEWKLAKVLLKFPDVILKITKDL 603

Query: 517 EPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             + L    Y++A  F   + +     +N     V+ N     M R+ L    A ++   
Sbjct: 604 CLHTLCELCYEIACAFTEFYDNCYCVEKNQTGEIVKVN-----MGRILLTEVTAMMLEQC 658

Query: 574 LNIIGVESPNEM 585
             ++G++   +M
Sbjct: 659 FALLGLKPVEKM 670


>gi|270291958|ref|ZP_06198173.1| arginine--tRNA ligase [Streptococcus sp. M143]
 gi|270279486|gb|EFA25328.1| arginine--tRNA ligase [Streptococcus sp. M143]
          Length = 562

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 243/603 (40%), Gaps = 116/603 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P++   G ++   A  L++     P  IA  I    KI+       +A   ++N +
Sbjct: 26  LLEQPKNSDMGDIAF-PAFSLAKVERKAPQMIAAEIAE--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   ++  I+  G +Y +   GK   + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSAISGAVIKEIIEKGSDYAQQTEGKEQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D     Y  +      
Sbjct: 143 NIFKKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPIDELLKLYVRI------ 196

Query: 211 KELADKYSSELLNFP---EEK--WLPIVKDYSVQA--MMKIIRDD--------LKALNIQ 255
                  ++E+ N P   EE   W   ++D   +A  + +  RD+         K LN++
Sbjct: 197 -------NAEIENDPALDEEGRLWFKKLEDGDPEATQLWQWFRDESLVEFNRIYKLLNVE 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D    E  ++        D +D  A Q    +G+L   +  +    D            
Sbjct: 250 FDSLNGEAFYN--------DKMDE-AVQILEEKGLLEESRGASIVNLD------------ 288

Query: 316 VGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
              DV+ P   + KSDG+  Y   D+A   Y    Y   F   IY +G + S + K+L+A
Sbjct: 289 ---DVELPPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFKQLKA 343

Query: 370 V-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           V                          +S +K  I +LL   ++        ++  +  D
Sbjct: 344 VLKKMGFDWSDDMIHVDFGLVTKNRQKLSTRKGNI-ILLEPTLQEAISRAKAQIEAKNPD 402

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIF 465
                 V   VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +S+ 
Sbjct: 403 LENKEQVAQAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSLL 460

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A           F  N     S  D    ++I  L ++ RVI+ A++  +P  +A Y 
Sbjct: 461 RKAD----------FQPNAQANYSLNDAESWEIIKLLQDFARVIKRASVNYDPSLIAKYA 510

Query: 526 YDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
             LA  F+ +++H R   E+P               RL L +A A ++   L ++GVE+P
Sbjct: 511 ISLAQAFNKYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAP 559

Query: 583 NEM 585
            +M
Sbjct: 560 EKM 562


>gi|327335290|gb|EGE77000.1| arginine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 582

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSYHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|301766472|ref|XP_002918656.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 660

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 137/584 (23%), Positives = 254/584 (43%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  V+ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQILKTKEQKVNPREIAENITRHLPDNECVEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+
Sbjct: 171 VSQQLTNLLVNGVKLP--ALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEDFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K + +  +  + R +   +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNRIYGALDISLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + DI++    +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 342 MNDIVEEFEDKGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA-------------------A 372
           Y  +DLA  K + +E   D +IYV+ S  S + + +   A                    
Sbjct: 384 YDTSDLAALKQRLFEEKADMIIYVVDSGQSVHFQTIFGAAQMAGWYDPKVTRVSHAGFGV 443

Query: 373 AVSEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
            + E K +      E VR   L  +G+   M K   +  D +     L+     V    +
Sbjct: 444 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCI 503

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  +
Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEGMLQK 557

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 558 AAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++    +I+G++    M
Sbjct: 618 VEKDRQT-GQVLKVNMWRMLLCEAVAAVMAKAFDILGIKPVQRM 660


>gi|281338995|gb|EFB14579.1| hypothetical protein PANDA_007149 [Ailuropoda melanoleuca]
          Length = 645

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 137/584 (23%), Positives = 254/584 (43%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  V+ V IAG GFIN++L   +
Sbjct: 96  GDYQCNSAMGISQILKTKEQKVNPREIAENITRHLPDNECVEKVEIAGPGFINVHLRKDF 155

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+
Sbjct: 156 VSQQLTNLLVNGVKLP--ALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 213

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 214 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEDFK 272

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K + +  +  + R +   +    DI + E    RG+      
Sbjct: 273 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNRIYGALDISLIE----RGESFYQDR 326

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + DI++    +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 327 MNDIVEEFEDKGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 368

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA-------------------A 372
           Y  +DLA  K + +E   D +IYV+ S  S + + +   A                    
Sbjct: 369 YDTSDLAALKQRLFEEKADMIIYVVDSGQSVHFQTIFGAAQMAGWYDPKVTRVSHAGFGV 428

Query: 373 AVSEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422
            + E K +      E VR   L  +G+   M K   +  D +     L+     V    +
Sbjct: 429 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCI 488

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++D  +  +
Sbjct: 489 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEGMLQK 542

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +     
Sbjct: 543 AAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 602

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R       K+ M R+ L  AVA+++    +I+G++    M
Sbjct: 603 VEKDRQT-GQVLKVNMWRMLLCEAVAAVMAKAFDILGIKPVQRM 645


>gi|294139047|ref|YP_003555025.1| arginyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293325516|dbj|BAJ00247.1| arginyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 581

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 253/616 (41%), Gaps = 124/616 (20%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D  HG  +TN AM+L++    +P  IA+LI+  +  D  V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKTHGDFATNLAMMLTKTARKNPREIAQLIIDSLPQDSQVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L +  +     G +L  + T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDENALANQLMA-ALKDDHLGISLPEQQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              + F G++V R+ ++ D G Q   L       Y + L   + +  +            
Sbjct: 147 VRALEFQGHKVIRQNHVGDWGTQFGML-----LAYMEELRAKNGEQAQ------------ 189

Query: 211 KELADK---YSSELLNFPEEKWLPIVKDYSVQAMM-------KIIRD--DLKALNIQHDI 258
            EL+D    Y +  + F E +   +     V ++        K+ R+  D+ +LN  HD+
Sbjct: 190 MELSDLETFYRAAKVRFDESEEFAVRARKLVVSLQSGDEYCNKLWREFNDI-SLNHCHDV 248

Query: 259 F------ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +      ++ +D  RG+    + + +++  L  QG + E       +K   + +   K+ 
Sbjct: 249 YARLGVSLTREDV-RGESAYNADLVEVVKELDTQGLLSE----SNGAKVVFQDEFKNKE- 302

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLA---------------YF------------- 341
                  GD +   + K+DG Y Y  +D+A               YF             
Sbjct: 303 -------GDPLPVIIQKADGGYLYATSDMAAMSYRSKVLNADRVLYFVDLRQALHFQQVF 355

Query: 342 ----KCKYER--------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
               K  + R        GF  M    G+D   +  R   V   V +  A+ ++   ELV
Sbjct: 356 KLARKANFVRPELSLEHMGFGTM---NGADGRPFKTRSGGVVKLV-DLLAEADIRALELV 411

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R     M         D   L  +   VG  SV++  L +  +    F F ++    + N
Sbjct: 412 RSKNPDM---------DEAELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGN 461

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YAY R   IF++A+DI      DL    ++ +  +    E  L   LA++  V+
Sbjct: 462 TAPYLLYAYTRVIGIFKRAEDI------DLSQAKILLEHDK----EKNLGNKLAQFGEVL 511

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                  +P+ +  YL++LA  F   +           + A   +    RL +    A  
Sbjct: 512 SRMVSKGQPHAMCAYLFELAGAFSSFYEA------CPVLAAETEEQKKSRLLIAKLTAKT 565

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+E+ + M
Sbjct: 566 LKQGLDLLGIETLDRM 581


>gi|50843566|ref|YP_056793.1| arginyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81611018|sp|Q6A5X8|SYR_PROAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50841168|gb|AAT83835.1| arginyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 556

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 31  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 90

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S  V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 91  SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 147 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 206

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 207 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 260

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 261 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 302

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 303 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 361

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 362 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 419

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 420 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 477

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 478 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 530

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 531 LALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|332709098|ref|ZP_08429067.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352149|gb|EGJ31720.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 585

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 239/589 (40%), Gaps = 89/589 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N A+ LS+ L   P  IAE ++  I +     S  IAG GFINL L P+YL + L
Sbjct: 40  GDYQSNVALALSKRLKQPPRAIAESLLQYIDVAEICQSPTIAGPGFINLSLKPAYLEERL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I       G  +     +V ++F S N    MHVGH R  ++GD++A ++ F G  V 
Sbjct: 100 REIHTDP-RLGVAVAPAPRQVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQNVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   D+ L  G    +Y +   +  AD+      
Sbjct: 159 RLNHVGDWGTQFGMLITYLREAYPSALTTADA-LDLGDLVTLYRQAKQRFDADE------ 211

Query: 223 NFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            F E   L +VK  S         Q +    R + + +    DI ++E    RG+    +
Sbjct: 212 EFREASRLEVVKLQSGAADSRRAWQLLCDQSRREFQIIYDLLDIQLTE----RGESFYNT 267

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDG 329
            + +++D L + G + E              D   K +        D    PL+  KSDG
Sbjct: 268 LLPEVVDYLDKSGLLVE--------------DSGAKCVFLEGFTNKDGEPLPLIVQKSDG 313

Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            Y Y   DLA  + + E+     +IYV  S  + +  ++  VA         + V+    
Sbjct: 314 GYNYATTDLAALRYRTEQDQAQRIIYVTDSGQANHFAQVFQVARRTGILPENVEVVHVPF 373

Query: 389 -VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
            + L  DG   K+  R+G+ + LR ++DE                               
Sbjct: 374 GLVLGEDGK--KLKTRSGETVRLRDLLDEAIARSGADLESRLKQEGREETEEFKEHVAKV 431

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L +  +    F F K+    + N   Y+ YAY R + I R+ +  F  L 
Sbjct: 432 VGMSAVKYADLSQNRTSNYIFSFDKMLA-LQGNTAPYMLYAYVRIQGISRKGEIDFEQLG 490

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D     ++ QE     +EL L   L +   V+        P +L  YL++L+  F+  +
Sbjct: 491 TDA---KILLQED----AELVLGKKLLQLSEVLGEVEKELMPNRLCQYLFELSQKFNQFY 543

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + P L+   A   K T  RL L    A  +  GL ++G++    M
Sbjct: 544 D---QCPVLK---AEEPKRT-SRLLLCDLTARTLKLGLYLLGIQVLERM 585


>gi|314924377|gb|EFS88208.1| arginyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 582

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S  V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLAPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|319897254|ref|YP_004135449.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432758|emb|CBY81123.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 577

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 139/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERSTVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIKAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|314967238|gb|EFT11337.1| arginyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981625|gb|EFT25718.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092264|gb|EFT64240.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094840|gb|EFT66816.1| arginyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327328683|gb|EGE70443.1| arginine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 582

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S  V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|315104702|gb|EFT76678.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315107765|gb|EFT79741.1| arginyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 582

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S  V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     S + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|163791004|ref|ZP_02185426.1| arginyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873743|gb|EDP67825.1| arginyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 564

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 267/604 (44%), Gaps = 107/604 (17%)

Query: 29  LDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +D+IV  +E+P+   HG ++   A  L++     P  IA + +      P V+ + + G 
Sbjct: 21  IDQIVNLLEKPKSVEHGDIAF-PAFALAKTYRKAPQQIA-IELGETVNSPIVEKIEVVGP 78

Query: 87  GFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            ++N +L+   +   +L  ++  G  YG + IGK   V I+  S N   P+ +GH R  V
Sbjct: 79  -YLNFFLNKQEVSAAVLKEVLEQGAHYGDSKIGKNRNVPIDMSSPNIAKPISMGHLRSTV 137

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGV 204
           +G+ LA+++   G+   +  ++ D G Q   L +    W  ++A+  N    P G    +
Sbjct: 138 IGNALANILTKVGFNPIKINHLGDWGTQFGKLIVGYKLWGSEEAVKEN----PIGELLRL 193

Query: 205 YLKHVGKELADKYSSELLNFPE-----EKWLPIVK--DYSVQAMMKIIRDD-LKALNIQH 256
           Y+         K+  E    PE      +W   ++  D   Q + K  R++ LK  N  +
Sbjct: 194 YV---------KFHEEAEEKPELDDNAREWFKKLEDGDEEAQNLWKWFREESLKEFNHVY 244

Query: 257 D-IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           D + I+ D F+ G+      +++++D L  +      +L      T    D+++  L   
Sbjct: 245 DRLNITFDSFN-GEAFYNDKMQEVVDLLEEK-----NVLTVNDGATL--VDLEKYNL--- 293

Query: 313 STMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL 367
                     P L  K+DG+  Y   DLA   Y K  Y+  F   +Y +G++ S + K+L
Sbjct: 294 ---------NPALIKKTDGATLYITRDLAAAIYRKRTYD--FALSLYAVGNEQSNHFKQL 342

Query: 368 EAV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +AV                          +S +K +I VLL E++         ++ ++ 
Sbjct: 343 KAVLKEMGFDWADDMYHVPFGLITQGGKKLSTRKGKI-VLLEEVLDDAVASALEQIEEKN 401

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARC 461
            +      + D+VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR 
Sbjct: 402 SELPNKEIIADQVGIGAVIFHDL--KNDRLNNFDFTIEEVVRFEGETGP--YVQYTRARA 457

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R++     D   + +P +        D    ++I  L  YP  ++ A    EP  +
Sbjct: 458 MSIIRKSGLAGIDTTVN-YPLD--------DAYSWEIIKLLQNYPADVQRAYEKFEPSVI 508

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A +   LA  F+ ++++ +       V A++ +    RL LV +VA+I+   L ++GV++
Sbjct: 509 AKHAIHLAQAFNKYYANSK-------VLADDAQRP-ARLALVQSVATILKEDLRLLGVQA 560

Query: 582 PNEM 585
           P++M
Sbjct: 561 PDQM 564


>gi|300717101|ref|YP_003741904.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062937|emb|CAX60057.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 576

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 231/596 (38%), Gaps = 109/596 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +      V IAG GFINL+L   +L   +
Sbjct: 37  GDYQANGIMAVAKKLGMAPRQLAEEVLKHLDLTGIASKVEIAGPGFINLFLDKQWLSAQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + V +    G   +   T V I++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  DA-VTAAPRLGVAPVAPQTVV-IDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L VF+R  +  Y+ D    E    G 
Sbjct: 155 RANHVGDWGTQFGMLIAFLEKQQNEHHEEHALADLEVFYREAKRTYDEDPAFAE-RARGY 213

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K  G    D+Y   +       W  +V D ++ A  +II D +     + D+ + E  
Sbjct: 214 VVKLQG---GDEYCRTM-------WKKLV-DITM-AQNQIIYDRMNVTLSRKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P  + D+           +G+    +  T    D  + +        GD +   +
Sbjct: 261 YNDMLPGIVADL---------TAKGLAVQSEGATVVFLDEYKNK-------DGDPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE    D ++Y +      +       V++   V  +V  
Sbjct: 305 KKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDCRQHQHLMQAWTIVRKAGYVPESVPL 364

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           +     ++L       +DG P K   RAG  I L  ++DE                    
Sbjct: 365 EHHAFGMMLG------KDGKPFKT--RAGGTIKLSDLLDEAVERATKLVGEKNPDMPADE 416

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  ++++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A 
Sbjct: 417 LKALANSVGIGAIKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA- 474

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                    +    V       +  E  L V L ++   I        P+ +  YLYDLA
Sbjct: 475 --------GIDETGVTGNAQIVEDREAALAVRLLQFEETITQVARDGTPHVMCAYLYDLA 526

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F G + H         + A++      RL+L    A  +  GL+ +G+++   M
Sbjct: 527 GLFSGFYEH------CPILTADDEATKQSRLKLALLTAKTLKQGLDTLGIDTVERM 576


>gi|306828746|ref|ZP_07461938.1| arginine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428924|gb|EFM32012.1| arginine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 562

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 248/597 (41%), Gaps = 104/597 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P++   G ++   A  L++     P  IA  I A  KI+       +A   ++N +
Sbjct: 26  LLEQPKNSDMGDIAF-PAFSLAKVERKAPQVIAADIAA--KINSQAFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +   ++  I+  G +Y +   G+   + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSAISGAVIKEIIKKGADYAQQTEGQEQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY+  +  ++ D G Q   L ++   W  ++A+  N  D          LK   
Sbjct: 143 NIFKKMGYKTIKINHLGDWGKQFGLLMVAYKKWGSKEAIEANPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  + + L+     W   ++D   +A  + +  RD+ L   N  + +   E D   
Sbjct: 195 RINAEIETDKALDDEGRLWFKKLEDGDPEATQLWQWFRDESLVEFNRIYKLLGVEFDSLN 254

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---L 324
           G+ +   D +D  A Q    +G+L     ++   C ++            DD D P   +
Sbjct: 255 GE-AFYNDKMDE-AVQILEEKGLL----EESQGACIVNL-----------DDFDLPPAMI 297

Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----AAAVSEK 377
            KSDG+  Y   D+A   Y    Y   F   IY +G + S + K+L+AV      A S+ 
Sbjct: 298 KKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFKQLKAVLKKMGFAWSDD 355

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
              ++  L    R        K+S R G+ I L   + E                     
Sbjct: 356 MVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAITRAKAQIEAKNPDLENKDQ 408

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
               VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +S+ R+A   
Sbjct: 409 IAQAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSLLRKAD-- 464

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                   F  N     S  D+   ++I  L ++ RVI+ A+   +P  +A Y   LA  
Sbjct: 465 --------FQPNAQESYSLNDSESWEIIKLLQDFARVIKRASDNYDPSLIAKYAISLAQA 516

Query: 532 FHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 517 FNKYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 562


>gi|260901277|ref|ZP_05909672.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308109838|gb|EFO47378.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 577

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 137/601 (22%), Positives = 236/601 (39%), Gaps = 118/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        +   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216
           +V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A K
Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210

Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263
             + ++       F  E W  +V    +Q         + + RDD+   ++ +D+     
Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDM----- 265

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                    +  I+ +L  QG   E                D  Q++F        G+ +
Sbjct: 266 ---------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372
              + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V  
Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  KN 
Sbjct: 362 SVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411

Query: 433 EL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSI 464
           EL           +     K  + SK                  N   Y+QYAY R  SI
Sbjct: 412 ELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASI 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A     +L  D+            D  E  LI  L ++   +++     +P+ +  Y
Sbjct: 472 FAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFEEAVQSVAREGQPHIMCSY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA  F   +           + A +  +   RL+L    A  I  GL+++G+E+   
Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIETLER 576

Query: 585 M 585
           M
Sbjct: 577 M 577


>gi|261343877|ref|ZP_05971522.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568263|gb|EFB73798.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 576

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 233/582 (40%), Gaps = 81/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE IV+ + ++     V IAG GFIN+++ P+++    
Sbjct: 37  GDYQANGVMGAAKKMGMPPRQLAEQIVSHLDLEGIATKVEIAGPGFINIFIDPTWVATYA 96

Query: 103 SSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + S      + +G    K   + I++ + N    MHVGH R  ++GD  A    F G
Sbjct: 97  EQALTS------DRLGIAPVKPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLG 150

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKY 217
           ++V R  ++ D G Q   L       Y + + N D SD+        Y +      A K+
Sbjct: 151 HKVIRANHVGDWGTQFGMLI-----AYLEKVQNEDASDMALADLEAFYRE------AKKH 199

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             E  +F       +VK  S     + +   L  + +Q +    ++ +HR + +   D +
Sbjct: 200 YDEDEDFAVRARGYVVKLQSGDEYCRKMWRKLVDITMQQN----QETYHRLNVTLTEDDV 255

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334
              +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y 
Sbjct: 256 MGESLYNSMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYT 314

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390
             D+A  K +YE    D  +Y + S    ++ +   +   A  + E  A  + +   +  
Sbjct: 315 TTDIACAKYRYETLHADRSLYYIDSRQHQHLMQAWTIVRKAGYIPESMALEHHMFGMM-- 372

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L +DG P K   R+G  + L  ++DE                           VG  +V+
Sbjct: 373 LGKDGKPFK--TRSGGTVRLSDLLDEAVERAQTLIREKNPDMPEDELLNLANVVGIGAVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R  SIF++A     DL   +    
Sbjct: 431 YADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKKANITEADLTLPIVLEA 489

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E+ L   L ++   I        P+ +  YLYDLA +F   + H     
Sbjct: 490 ---------PHEIVLATRLMQFEETILTVARDGTPHVMCAYLYDLAGLFSSFYEH----- 535

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+N      RL+L       +  GL+ +G+E+   M
Sbjct: 536 -CPILSADNDAQRQSRLKLALLTQKTLKVGLDTLGIETVERM 576


>gi|149191128|ref|ZP_01869387.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835056|gb|EDL52034.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 577

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 135/606 (22%), Positives = 234/606 (38%), Gaps = 128/606 (21%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              +       R  +    +  I  ++ + N    MHVGH R  ++GD +   + F G+ 
Sbjct: 97  DEALTDA----RLGVASQEQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152

Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201
           V R  +I D G Q   L                    L  F+R  + LY+ D++  E   
Sbjct: 153 VIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLYDEDAEFAE-RA 211

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNI 254
            G  +K  G    D++ +E+       W  +V    +Q         + + RDD+   ++
Sbjct: 212 RGYVVKLQG---GDEFCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312
            +D+           P     I+ +L  +G   E                D  Q++F   
Sbjct: 262 YNDML----------PG----IVQDLKEKGLAVED---------------DGAQVVFLDE 292

Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
                G+ +   + K DG + Y   D+A  K +YE+ G D ++Y + S    ++++   +
Sbjct: 293 YKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYEKLGADRVLYFIDSRQHQHLQQAWTI 352

Query: 371 ---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              A  V E  +  +     +  L +DG P K   RAG  + L  ++DE    +    ++
Sbjct: 353 VRKAGYVPESTSLEHHAFGMM--LGKDGRPFKT--RAGGTVRLADLLDEAVERAT--ALI 406

Query: 428 WRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459
             KN EL           +     K  + SK                  N   Y+QYAY 
Sbjct: 407 ESKNPELDAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYT 466

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SIF +A     +L  D+            D  E  L+  L ++   +++     +P+
Sbjct: 467 RVASIFAKAGVSMDELSGDI---------KITDEKEKALVAKLLQFEEAVQSVAREGQPH 517

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YL++LA  F   +           + A +  +   RL+L    A  I  GL ++G+
Sbjct: 518 IMCSYLFELAGQFSSFYEA------CPILIAEDESVKQSRLKLAALTAKTIQQGLELLGI 571

Query: 580 ESPNEM 585
           E+   M
Sbjct: 572 ETLERM 577


>gi|238799211|ref|ZP_04642660.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238716940|gb|EEQ08807.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 608

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 238/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L   +     
Sbjct: 69  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLEGIASKVEIAGPGFINIFLDRQW----- 123

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V S +E+       G        + +++ + N    MHVGH R  ++GD     + F
Sbjct: 124 ---VASKVEHALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 180

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 181 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNESASDMDLSDLELF--YQQAKKTYDEDEEF 238

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  +I  D L  + +  D 
Sbjct: 239 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQIAYDRLN-VTLTKDD 286

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P     I+ +L  +G   E         T    D  + +        G+
Sbjct: 287 VMGESLYNAMLPG----IVADLKAKGLAVE-----SDGATVVYLDEYKNK-------DGE 330

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + +    +       V++   V
Sbjct: 331 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYV 390

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 391 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELK 450

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VV+ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+F++A   
Sbjct: 451 QVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVD 509

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    VI ++ E       L   L ++  VI        P+ +  YLYD+A +
Sbjct: 510 ESSLTLPL----VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDVAGL 560

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+ +   M
Sbjct: 561 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIRTVERM 608


>gi|313771792|gb|EFS37758.1| arginyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313831656|gb|EFS69370.1| arginyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834810|gb|EFS72524.1| arginyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314975006|gb|EFT19101.1| arginyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314977897|gb|EFT21991.1| arginyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314984694|gb|EFT28786.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315095588|gb|EFT67564.1| arginyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327332886|gb|EGE74618.1| arginine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327447714|gb|EGE94368.1| arginyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448589|gb|EGE95243.1| arginyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328762012|gb|EGF75518.1| arginine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 582

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 57  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S +V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L   +  +       + S + + Y           + AD+   
Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
            +  L   + + L I +      ++ I  +   A   +  + ++++D   G+ S   D  
Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286

Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++D L   G   E                D   L     + G D    + K DG + Y 
Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391
           A DLA  + +  +   D +IYV     + + + L  VA  A       +   +   +V L
Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQNHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444
             DG P K   R G  ++L  ++DE  + +   + L    +   S  L  D+    E   
Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445

Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           Q+  +   Y+QYA+AR   I R+A      ++ P+ D D      I    E   +E QL 
Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ +  ++E       P+KL  YLY+LA  +   +    + P LR    +  ++   R
Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A   ++  GL+++G+++P+ M
Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|223933231|ref|ZP_03625222.1| arginyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898161|gb|EEF64531.1| arginyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 562

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 252/604 (41%), Gaps = 118/604 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  IV   K+D       +A   ++N +
Sbjct: 26  LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAADIVE--KLDTTGFEKVVATGPYVNFF 82

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L+ ++    +YG+  IG+G  V I+  S N   P  VGH R  V+GD LA
Sbjct: 83  LDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY+  R  ++ D G Q   L ++   W  + A+  +    P      +Y++ + 
Sbjct: 143 NIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGDKAAVEAD----PISELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E  +K     L+    +W   ++D   +A  + +  RD+ L   N  +D      D + 
Sbjct: 198 AEAEEKPE---LDDEARQWFKKLEDGDPEAHELWQWFRDESLVEFNRIYDKLDVTFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK  +  D++   L             P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGARIVDLESYNL-------------PP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             ++K+DG+  Y   D+A   Y K  Y+  F   IYV+G +   + K+L+AV   +    
Sbjct: 295 ALIMKTDGATLYITRDMATAMYRKRTYD--FVKSIYVVGQEQINHFKQLKAVLKEMDFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    +   L       +D    K+S R G+ I L   +DE                  
Sbjct: 353 SDDMTHVTFGLVT-----KDKK--KLSTRKGNIILLEPTLDEAISRALTQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +SI R+A
Sbjct: 406 KEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQ-ESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                         N +P  E+++   D     +I H+  +  V+E A    +P  +A Y
Sbjct: 464 --------------NFVPSAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAKY 509

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             +LA  F+ +++H R   E+P               RL L +    ++   L ++GV++
Sbjct: 510 AINLAQAFNKYYAHTRILDESPERD-----------SRLALAYTTGLVLKEALRLLGVKA 558

Query: 582 PNEM 585
           P +M
Sbjct: 559 PEKM 562


>gi|171912424|ref|ZP_02927894.1| arginyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 588

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 242/596 (40%), Gaps = 72/596 (12%)

Query: 30  DRIVIE--RPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVF 82
           D +VIE     D   G   +NAAM  ++ L      ++P  +A  +V  + +    +   
Sbjct: 25  DGLVIEVTNASDSRFGDYQSNAAMTAAKLLSTKEQKINPRAMATQLVEAMDVTGLCEKPE 84

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GF+N  L+   L+  LSS++      G   +     + ++F + N   PMHVGH R
Sbjct: 85  IAGPGFLNFRLTKEALQGALSSLITDE-RLGVPAVDAAKTIVVDFSAPNVAKPMHVGHIR 143

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGY 200
              +GD+L  +   +G+ V  + ++ D G Q   +      R  Q     D   +L   Y
Sbjct: 144 STFIGDSLTRIARLAGHNVVTDNHVGDWGTQFGMIIHGWKTRLNQDALKEDPIHELVRVY 203

Query: 201 YPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                     + + +   +EL+   +   + L I K+  V+  +  + D    L IQ D 
Sbjct: 204 REINAATKADESVLETCKTELVKLQQGDAENLAIWKE-CVKLTLDQLHDIYGRLGIQFDH 262

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           ++ E  ++      + D++     Q  + EG      S   +K + D     F     G 
Sbjct: 263 YLGESYYNDALAPLVEDMLTK--GQARISEGA-ACVFSDGVKKPEEDP----FLINRDGQ 315

Query: 319 DVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
               P +  KSDG + Y   DLA    +  E   D + YV+G+    + +++   A    
Sbjct: 316 WTPAPCIVRKSDGGFLYATTDLATIDHRVIEWKADEIWYVVGAPQQLHFRQVFEAAHRRG 375

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
                +++    +  L  DG   K   R+G+ + L  V+DE                   
Sbjct: 376 HSTRMVHIAFGSI--LGPDGKMFKT--RSGESVGLLEVIDEAIERARAVVEEREFSDDDK 431

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAK 469
                 +G  +V++  L      + D+ F   K  S + N   Y+  AY R R+IFR+  
Sbjct: 432 AKIASVIGIAAVKYAEL--SQHRMTDYKFAWEKMLSFQGNTAPYLLNAYVRTRAIFRK-- 487

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                LD ++    + P+ S  + +E QL + LA++   + +      P  LA YLY+LA
Sbjct: 488 -----LDGEV---KLAPEVSFTEDAERQLALKLAQFGEAVHDVLEDFRPNLLAQYLYELA 539

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +H  +      P LR            RL L    + ++ SGL ++G+E+ + M
Sbjct: 540 GYYHTFYE---ACPVLRSEGVTRN----TRLVLADTTSRVLKSGLGLLGIETTDRM 588


>gi|37526009|ref|NP_929353.1| arginyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932033|sp|Q7N565|SYR_PHOLL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|36785439|emb|CAE14385.1| Arginyl-tRNA synthetase (Arginine-tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 576

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 240/602 (39%), Gaps = 103/602 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I +      G    N  M  ++ +G+ P  +AE +V  + +      V IAG GFIN++L
Sbjct: 28  IRQSAKAQFGDYQANGVMAAAKKVGMPPRQLAEKVVNLLNLQGIASKVEIAGPGFINIFL 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +++   + + +    E       K   + +++ + N    MHVGH R  ++GD     
Sbjct: 88  DKAWIAANIETALKD--EKLGVTPAKPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRT 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSD 195
           + F G++V R  ++ D G Q   L                   L  F+R  +  Y+ D +
Sbjct: 146 LEFLGHKVIRANHVGDWGTQFGMLIAYLEKVQNENASDMALSDLEAFYREAKKHYDEDEE 205

Query: 196 LP---EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 GY        V  +  D+Y   +       W  +V     Q      R ++   
Sbjct: 206 FAIRARGYV-------VKLQGGDEYCRTM-------WRKLVDITMAQNQQTYDRLNV--- 248

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            +  D  + E  ++   PS    I+ +L +QG   E         T    D  + +    
Sbjct: 249 TLTKDSVMGESLYNDLLPS----IVADLKQQGLAVES-----DGATVVYLDEYKNK---- 295

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------V 364
               G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S    +       V
Sbjct: 296 ---EGEPMGVIIQKQDGGYLYTTTDIACAKYRYETLHADRILYYIDSRQHQHLMQAWTIV 352

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI------- 408
           ++   V  +VS +     ++L +  + +  R G  ++++       +RA   I       
Sbjct: 353 RKAGYVPESVSLEHHMFGMMLGKDSKPFKTRAGGTVRLTDLLDEAIERANTLIREKNPDM 412

Query: 409 ---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
               L+ VV  VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF
Sbjct: 413 PEDELKKVVSAVGIGAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIF 471

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAF 523
           ++A     ++D       VI  E      E  L   L ++   I   T+A+E  P+ +  
Sbjct: 472 KRA-----EIDESSLTLPVILNEDR----EQTLATRLLQFEETI--TTVAREGTPHVMCA 520

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YLYDLA +F   + H       + + A + +L   RL+L    A  +  GLN +G+E+  
Sbjct: 521 YLYDLAGLFSCFYEH------CQILNAESEELRQSRLKLALLTAKTLKQGLNTLGIETVE 574

Query: 584 EM 585
            M
Sbjct: 575 RM 576


>gi|282889548|ref|ZP_06298090.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500561|gb|EFB42838.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 586

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 251/601 (41%), Gaps = 96/601 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89
           I +      GH   N+AM L++ LG  P  IA  I+  + ++ +    ++ + IAG GFI
Sbjct: 33  ISQSTQAQFGHYQCNSAMKLAKVLGAKPRDIATRIIEHVDVNLEGIRLIEKMEIAGPGFI 92

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L P+YL + L  I++        L     K+ +EF S N    +HVGH R  ++GD+
Sbjct: 93  NITLDPAYLSQKLHRILLDS-HLDIELPQHKQKIIVEFSSPNTAKELHVGHLRSTIIGDS 151

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKH 208
           LA L  F G++V R  +I D G     L   +  +    L   + +DL        +L  
Sbjct: 152 LARLFEFLGHDVLRLNHIGDWGTAFGMLIAYMKQKTPHVLDGTEKTDLQ-------HLVQ 204

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
             K+  +++ S+  +F +   L +V      A+       LKA  I  DI        R 
Sbjct: 205 WYKKSKERFDSD-ADFKKTSQLEVV------ALQGGDPAALKAWEIICDI-------SRK 250

Query: 269 DPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG---------- 317
               I D++D  +  +G  Y     P  + T    D++ K L+  S              
Sbjct: 251 AYQEIYDLLDVKIIERGESYYN---PMLADTV--ADLEAKGLVTLSDGAKCIFLEGFQNR 305

Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373
           +    PL+  KSDG Y Y   D+A  + +  E   D +IYV  +  S + + +   A   
Sbjct: 306 EGASLPLMVQKSDGGYNYDTTDMAAIRQRTLEEKADRIIYVTDAGQSLHFQMIFQAAEKA 365

Query: 374 --VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD--------FITLRH----------- 412
             +   K +++ +   LV L  DG   K   R+G+           ++H           
Sbjct: 366 HYLDASKVRVDHVPFGLV-LGSDGK--KFRTRSGETERLIDLLLAAVKHADQLLIERSPE 422

Query: 413 --------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                   +   +G  +V++  L    +    F + ++  + + N   ++ YAY R   I
Sbjct: 423 MPKEEREKLAKTLGIAAVKYADLACNRTGDYTFSYERML-RFEGNTAAFLMYAYVRVAGI 481

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+   I P L  +     ++ +      SE+ L VHLA++   +E       P +L  Y
Sbjct: 482 KRK---INPALKIEELKDPIVLEHP----SEISLAVHLAQFEEALEQVASDLLPNRLTEY 534

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY LA  F+  +   R       V+ + ++ +  RLQ+   VA  +  GL+I+GV++   
Sbjct: 535 LYGLAEKFNAFFRDCR-------VEGSPQQNS--RLQICEIVAKTMKQGLSILGVQTVER 585

Query: 585 M 585
           M
Sbjct: 586 M 586


>gi|330718773|ref|ZP_08313373.1| arginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 553

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 251/597 (42%), Gaps = 105/597 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IVA   I+ +     +A   ++N +L
Sbjct: 17  LEAPKSSQLGDVAF-PTFTLAKALRKAPQQIAADIVA--TINQEGFEKIVATGPYVNFFL 73

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              S  + ILS ++     +G N  G+   + I+  S N   PM +GH R  V+G+ LA+
Sbjct: 74  DKVSTSQDILSDVLSKKNTFGDNNDGQTANITIDMSSPNIAKPMSMGHLRSTVIGNALAN 133

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +   +GY+  +  ++ D G Q   L  +   W  ++ + ++    P       Y++   K
Sbjct: 134 ITQKNGYQPVKINHLGDWGTQFGKLIYAYKTWGSEEEVKSD----PIATLLRYYVEFHEK 189

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
             AD    E LN     W   ++D   +A               H+++     F      
Sbjct: 190 AKAD----ESLNDEGRAWFKKLEDGDAEA---------------HELWQW---FRNESLK 227

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS--------TMVGDDVDR 322
              +I D L  Q   + G       K TQ  D ++ KQLL  S        + V +++  
Sbjct: 228 EFTEIYDRLDIQFDSFNG-EAFYNDKMTQVVDLLNEKQLLVESQGAQIVDLSTVDENLTP 286

Query: 323 PLLK-SDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EK 377
            ++K SDG+  Y   DLA   Y K  Y   F   +YV+G +   + ++++AV + +  E 
Sbjct: 287 AMIKRSDGATLYMTRDLAAALYRKNTY--NFAKSLYVVGGEQREHFRQMKAVLSLLGFEW 344

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
              +  +   L+    +G   KMS R GD + L+ V+D+                     
Sbjct: 345 ADDVEHIAFGLITF--NGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPTLANKDE 400

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
               VG+ +V F  L    +   DF   + V+ +    P  YVQY  AR  SI R+A+  
Sbjct: 401 VAEKVGAGAVVFHDLMNDRTNNFDFSLEEVVRFEGDTGP--YVQYTRARALSILRKAQ-- 456

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             ++D      +        D +   ++  L ++P V+  A   +EP  +A Y   L+  
Sbjct: 457 -QEVDMASLSLD--------DQATWDVVTSLGQFPTVVRQAWQRREPSIIAKYALHLSRA 507

Query: 532 FHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ ++++ R   E+ +L             RL LV++VA ++   L ++GV++P EM
Sbjct: 508 FNKYYANSRILNEDDQLN-----------ARLALVNSVAIVLEESLRLLGVKAPEEM 553


>gi|148828426|ref|YP_001293179.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166232792|sp|A5UJ40|SYR_HAEIG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148719668|gb|ABR00796.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 577

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 237/594 (39%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++   ++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQHEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  I L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTIKLADLLDEAIERATVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|329666892|gb|AEB92840.1| arginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 558

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 257/602 (42%), Gaps = 115/602 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 24  MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIS-DDNFTSIQAVGP-YVNF 80

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +G+G  V I+  S N   PM +GH R  V+G+++
Sbjct: 81  AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + +G+ K+L+ V
Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341

Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K  + V L ++++        ++ ++  + 
Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466
              + V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI R
Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     ++  D    N        D     +   LA++P ++E A+   EP  +A Y  
Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASEKFEPSIIAKYAL 507

Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +P 
Sbjct: 508 DLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNAPK 556

Query: 584 EM 585
           EM
Sbjct: 557 EM 558


>gi|269925558|ref|YP_003322181.1| arginyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789218|gb|ACZ41359.1| arginyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 601

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 252/548 (45%), Gaps = 93/548 (16%)

Query: 84  AGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A  G++N++  PS +  ++L+++   G  YGR    K   V +E+   N     H+GH R
Sbjct: 101 AQNGYVNMFFEPSDVALRLLATVHEQGDSYGRG-NPKSETVMVEYGQPNTHKQFHIGHLR 159

Query: 143 CAVVGDTLASLMAFSGY-EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
              +GD++A ++ F+GY +V +  YI D GA +    +   W Y +  ++ +    + Y 
Sbjct: 160 NTALGDSIARILDFAGYRKVLKASYIGDIGAHV----IKWLWGYNK-WHSGEQPPADPYK 214

Query: 202 PGVYLKHV--------------GKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKII 245
            G +L+ +               +E  D ++      PE  E W    +++S+    +I 
Sbjct: 215 IGPWLESIYVEANSAIESNPDYQREYRDLFARWDRRDPEVVELWRR-TREWSLNYFRRI- 272

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               K L++  D++  E DF      P + I+ +L  +G V E     P  +  QK  ++
Sbjct: 273 ---FKELDVNFDVWFYESDFE----EPGKKIVQDLLNKG-VAEIDEGAPIVRIDQKLGLE 324

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV 364
           ++   +R+ +        L +SDG+  Y   +LA  + K+ E   D ++ V+    + Y 
Sbjct: 325 KE--TYRTIV--------LQRSDGTSLYQTKELALTRTKFDEYKVDRILNVVDVRQTLYF 374

Query: 365 KRLEAVAAAVSEKKAQINVLL-CELVRL------YRDGMPI-------KMSKRAGDFITL 410
           +++  V   +  ++A+ +  +  ELV L       R+G  +       +M +RA + +  
Sbjct: 375 QQVFKVLELLGYEQARNSQHIPYELVSLPTGPMSSREGTTVGYDEFATEMYERALEVVRE 434

Query: 411 RH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF---YVQYA 457
           ++          +   V   S++F ML R N+ +L FD    KE++ +   F   YVQYA
Sbjct: 435 KNPEMPQEQQERIARIVSMGSMKFGMLNRDNTRVLVFD----KEEALDFDGFSAPYVQYA 490

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR   I  +A    PD+D++      I + S  +T+ L++I  L E    +E A    +
Sbjct: 491 HARACRILEKA----PDIDWENLR---IGELSTVETNLLEMISRLNE---SVERAAREYK 540

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  Y+Y+LA  F+  +   R +P LR       ++   RL +V+A    + + L ++
Sbjct: 541 PLHVVNYVYELAKTFNEFY---RVSPVLR----AEEEVRNFRLAVVYATKVCLANSLYLL 593

Query: 578 GVESPNEM 585
           G+E+P  M
Sbjct: 594 GIEAPEVM 601


>gi|254506840|ref|ZP_05118979.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550125|gb|EED27111.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 605

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 133/603 (22%), Positives = 236/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 65  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 124

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            S +       R  + K  +  I  ++ + N    MHVGH R  ++GD +   + F G++
Sbjct: 125 ESALADA----RLGVAKEEQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 180

Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201
           V R  +I D G Q   L                    L  F+R  + LY+ D +      
Sbjct: 181 VIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLYDEDEEFALRAR 240

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             V     G    D+Y +E+       W  +V    VQ                     +
Sbjct: 241 NYVVKLQSG----DEYCAEM-------WKKLVDVTMVQ---------------------N 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318
           + ++ R + S  RD +   +    +  GI+   K +   + D D  Q++F        G+
Sbjct: 269 QRNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKERGIAQED-DGAQVVFLEEYKNKDGE 327

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE  G + ++Y + S    +       V++   V
Sbjct: 328 AMGVIIQKRDGGFLYTTTDIACAKYRYETLGANRVLYFIDSRQHQHLMQAWTIVRKAGYV 387

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              VS +     ++L       +DG P K   RAG  + L  ++DE    +++  ++  K
Sbjct: 388 PEEVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAIK--LIESK 437

Query: 431 NSELLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCR 462
           N++L   +  K+               K ++ +             N   Y+QYAY R  
Sbjct: 438 NADLDSEEKVKIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVS 497

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF +A      +  D     +   E +    E  LI  L ++   +++     +P+ + 
Sbjct: 498 SIFAKA-----GISMDNLAGEIKVTEEK----EKALIAKLLQFEEAVQSVAREGQPHIMC 548

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           +   +  +   RL+L    A  I  GL+++G+E+ 
Sbjct: 549 SYLFELAGQFSSFYEA------CPILNTEDESVKQSRLKLAALTAKTIKQGLSLLGIETL 602

Query: 583 NEM 585
             M
Sbjct: 603 ERM 605


>gi|327394189|dbj|BAK11611.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis AJ13355]
          Length = 562

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 135/590 (22%), Positives = 237/590 (40%), Gaps = 97/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG  P  +AE ++  + +      V IAG GFIN++L     R  L
Sbjct: 23  GDYQANGIMAVAKKLGQAPRQLAETVIQHLDLTGIASKVEIAGPGFINIFLD----RGWL 78

Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +    + +++ R  + +     + +++ + N    MHVGH R  ++GD     +AF G+ 
Sbjct: 79  AEHARNALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRTLAFLGHN 138

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L    F   QQ    N +++      G Y +      A +   E
Sbjct: 139 VIRANHVGDWGTQFGMLI--AFLEKQQN--ENHAEMALADLEGFYRE------AKRTYDE 188

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273
              F E     +VK     DY  Q   K++           DI +S++   + R + +  
Sbjct: 189 DPEFAERARRYVVKLQGGDDYCRQMWKKLV-----------DITMSQNQHIYDRLNVTLT 237

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330
           R  +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG 
Sbjct: 238 RKDVMGESLYNDMLPGIVADLKAKGL-AVESEGATVVFLDEYQNKEGEPMGVIIQKKDGG 296

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382
           Y Y   D+A  K +YE    D +IY + S    +       V++   V  +V  +     
Sbjct: 297 YLYTTTDIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYVPESVPLEHHAFG 356

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           ++L       +DG P K   R+G  I L  ++DE                          
Sbjct: 357 MMLG------KDGRPFKT--RSGGTIKLSDLLDEAYDRAYSLVSEKNPEMSEEERRALAE 408

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A      +
Sbjct: 409 VVGVSAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----GI 462

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D    ++    +  D  E  L   L ++  VI        P+ +  YLYD+A +F G 
Sbjct: 463 EADAIQADI----TLTDDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDVAGLFSGF 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + H         + A +      RLQ+    A  +  GL+ +G+++ + M
Sbjct: 519 YEH------CPILAAEDEATRQSRLQIAALTAKTLKLGLDTLGIKTVDRM 562


>gi|257463219|ref|ZP_05627618.1| arginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060806|ref|ZP_07925291.1| arginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686482|gb|EFS23317.1| arginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 570

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 124/575 (21%), Positives = 240/575 (41%), Gaps = 75/575 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM+ S+ +G +P  IAE I   +  +  ++ + IAG GFIN++L  +YL   +
Sbjct: 39  GDFQCNFAMMNSKIIGKNPRMIAEEIQKNLVENEVIEKLEIAGPGFINIFLKEAYLSTFI 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I     ++  + + +   V I+F S N    MH+GH R  ++GD++  +  + GY V 
Sbjct: 99  KKIGKERFDF--SFLNRKGDVVIDFSSPNIAKRMHIGHLRSTIIGDSICRIYRYLGYHVI 156

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYS 218
            + +I D G Q   L +    W  Q A   N  +  E  Y        +H   E   +  
Sbjct: 157 GDNHIGDWGTQFGKLIIGYRKWLDQDAYKKNAIEELERVYVKFSQESEEHPELEEEARLE 216

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            + L   +E+   + K++ +Q  M+        L+I  D F  E  +H   P  ++++++
Sbjct: 217 LKKLQDGDEENYNLWKEF-IQVSMEEYEKLYSRLDIHFDTFYGESFYHPIMPEVVKELVE 275

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +      ++  P+ +    C + +K                    DG++ Y  +D+
Sbjct: 276 RGIAKEDDGAKVVFFPEEENLFPCIVQKK--------------------DGAFLYATSDI 315

Query: 339 AYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  K + +    + +IY+       + K+   +   +     + +V     +  + DG+ 
Sbjct: 316 ATVKFRLHTYDVNRLIYLTDERQQDHFKQFFRITEMLGWNVEKYHVWFG--IMRFADGV- 372

Query: 398 IKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRK 430
              S R G+ I L  ++DE                           VG  ++++  L + 
Sbjct: 373 --FSTRKGNVIRLEELLDEGKRRAYEIVQEKNPSLPEEEKQHIAEVVGVGAIKYADLSQN 430

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               + F++ K+    + N   Y+QY+YAR +SI  +AK++  +   D+    ++ Q   
Sbjct: 431 RQSPIIFEWDKIL-SFEGNTAPYLQYSYARVQSILDKAKNLGKEATEDVV---LVLQ--- 483

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            D  E  L  ++  +P  +  A    +P  +A YLYDL+   +  +++    P L     
Sbjct: 484 -DKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNC---PILN---- 535

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++   R  L      +I  GLN++G+++ + M
Sbjct: 536 QEEEILKSRAYLAKQAGEVIKQGLNLLGIQTLDRM 570


>gi|237807247|ref|YP_002891687.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499508|gb|ACQ92101.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 580

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 230/547 (42%), Gaps = 88/547 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++  +D AHG L+TN AM+L++P G +P  +A+LI+  +     V    IAG GFIN
Sbjct: 29  RIQVDNTKDKAHGDLATNLAMLLAKPAGKNPRELAQLIIEHLPASTLVARAEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L  ++L K + +I  S     +      T V +++ + N    M V H R  V+GD +
Sbjct: 89  FFLDSAWLAKQIEAIAASPKAEVKAAAPAQTIV-LDYSAPNVAKEMAVHHIRSTVIGDAV 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKH 208
              M F G+ V R  +I D G Q   L ++   + Q  QA     SDL E +Y       
Sbjct: 148 TRTMEFLGHHVIRANHIGDWGTQFGML-IAYLEKVQNEQASELELSDL-EAFY------- 198

Query: 209 VGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALN-IQHD---IFI 260
                A K+  E   F E     +VK    D   +AM K + D   A N I +D   + +
Sbjct: 199 ---REAKKHYDEDEVFAERARGYVVKLQGGDEYCRAMWKKLVDITMAQNQIIYDRLNVSL 255

Query: 261 SEDDFHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           SE D   G+   +P +R ++++L  +G   E                +   +++   + G
Sbjct: 256 SEKDV-MGESLYNPMLRTVVEDLQAKGLAVES---------------EGALVVYLDEIKG 299

Query: 318 DDVDRPLL---KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
            D +   +   K DG + Y   D+A  K + E    D ++Y + S    ++++   +A  
Sbjct: 300 KDGEAMAVIIQKRDGGFLYATTDIACAKYRVETLKADRVLYFIDSRQHQHLQQAWMIARK 359

Query: 374 VSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
                 Q+++      + L +DG P K   R G  + L  ++DE                
Sbjct: 360 AGYVPEQVSLEHHAFGMMLGKDGKPFKT--RTGGTVKLSELLDEAELRAGALIAEKSADL 417

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      V   +V++  L +  +    FD+  +    + N   Y+QYAY R +SIF
Sbjct: 418 PEAEKAKVIHAVAMGAVKYADLSKNRTTDYIFDWDNML-TFEGNTAPYLQYAYTRIQSIF 476

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+  D     +    P  +         +E  L   L ++  V+ N      P+ L  YL
Sbjct: 477 RRVGD-----EAQPGPVQITA------PAEETLAQKLLQFNDVVHNVAQKGMPHLLCTYL 525

Query: 526 YDLASVF 532
           Y+L+  F
Sbjct: 526 YELSGCF 532


>gi|59711446|ref|YP_204222.1| arginyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354336|sp|Q5E6L2|SYR_VIBF1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|59479547|gb|AAW85334.1| arginyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 577

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 136/600 (22%), Positives = 231/600 (38%), Gaps = 116/600 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKRLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  + K  + NI  ++ + N    MHVGH R  ++GD +   + F G+ 
Sbjct: 97  EAALADE----RLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152

Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201
           VTR  +I D G Q   L                    L  F+R  + LY+ D +      
Sbjct: 153 VTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTAR 212

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             V     G E           F  E W  +V    VQ      R +   +++  D  + 
Sbjct: 213 GYVVKLQSGDE-----------FCAEMWKKLVDVTMVQNQRNYDRLN---VSLTRDNVMG 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++    S +  I+ +L +QG   E       S+  Q   +D  +        G+ + 
Sbjct: 259 ESMYN----SMLAPIVADLQKQGLAVE-------SEGAQVVFLDEYK-----NKDGEPMG 302

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAA 373
             + K DG + Y   D+A  K +YE    D ++Y + S    +       V++   V  +
Sbjct: 303 VIVQKRDGGFLYTTTDIACAKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPES 362

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  KN +
Sbjct: 363 VSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERATK--LIEEKNKD 412

Query: 434 LLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCRSIF 465
           L   +  K+               K ++ +             N   Y+QYAY R  SIF
Sbjct: 413 LSAEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIF 472

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +A      L  D     V       D  E  L+  L ++   ++      +P+ +  YL
Sbjct: 473 SKA-----GLSMDELTGEVKIT----DEKEKALVAKLMQFEEAVQAVASEGQPHLMCAYL 523

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++LA  F   +           +   +  +   RL+L    A  I  GL ++G+E+   M
Sbjct: 524 FELAGQFSSFYEA------CPILNNEDDAVKQSRLKLAALTAKTIKQGLELLGIETLERM 577


>gi|262047826|ref|ZP_06020776.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260571883|gb|EEX28454.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 561

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 252/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  ++   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-NFANIQAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  ++     YG   IG+G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261
               + + EL N   E W   ++D   +A+          +K  +   K L +  D +  
Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F+      ++ +ID L  +G ++E       S+  Q  DM   +             
Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289

Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370
            P  ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V        
Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349

Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                             +S +K  + V L ++++        ++ ++  D      V  
Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408

Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A  + 
Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464

Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +           P E++    D     +   LA++PR++  +    EP  +A +  DLA
Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 514 KKLNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561


>gi|73953494|ref|XP_866938.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 4 [Canis
           familiaris]
          Length = 597

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 249/571 (43%), Gaps = 70/571 (12%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M+ ++   ++P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G+
Sbjct: 61  MLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDFVSQQLTNLLVNGV 120

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D 
Sbjct: 121 QLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDW 178

Query: 171 GAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G Q   L   +  ++   L  +    DL + +Y     +   +E   K + + +   + K
Sbjct: 179 GTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSK 237

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGY 285
              I+K + +  +  + R +   +    DI + E    RG+      + D++     +G+
Sbjct: 238 NPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDRMNDVVKEFEDKGF 291

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344
           V              + D D ++++F   + G  V   ++KSDG YTY  +DLA  K + 
Sbjct: 292 V--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAALKQRL 333

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-------------------SEKKAQINVLL 385
           +E   D +IYV+ +  S + + +   A  +                    E K +     
Sbjct: 334 FEEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRS 393

Query: 386 CELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELL 435
            E VR   L  +G+   M K   +  D +     L+     V    +++  L        
Sbjct: 394 GETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDY 453

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TS 494
            F F K+ +  + N   Y+ YA+ R RSI R A     +++ ++  +     +   D   
Sbjct: 454 IFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQETKIVLDHEK 507

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E +L   +  +P +++        + L  Y+Y+LA+ F   +       + R       K
Sbjct: 508 EWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQT-GQVLK 566

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + M R+ L  AVA+I+    +I+G++    M
Sbjct: 567 VNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 597


>gi|16273477|ref|NP_439728.1| arginyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580361|ref|ZP_05848190.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174541|sp|P43832|SYR_HAEIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1574424|gb|AAC23231.1| arginyl-tRNA synthetase (argS) [Haemophilus influenzae Rd KW20]
 gi|260093038|gb|EEW76972.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 577

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 139/594 (23%), Positives = 237/594 (39%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEVFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYARLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+ +L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVKDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|253582251|ref|ZP_04859474.1| arginyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251835790|gb|EES64328.1| arginyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 570

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 131/589 (22%), Positives = 245/589 (41%), Gaps = 103/589 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   TN AM+ S+ +G +P TIA+ I+  ++ +  +D + IAG GFIN++L   YL ++L
Sbjct: 39  GDFQTNFAMMNSKIIGKNPRTIAQEILDNLEENDVIDKLEIAGPGFINIFLKSKYLGEVL 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                   EY  + + +   V I+F S N    MH+GH R  ++GD++  +  + GY + 
Sbjct: 99  KKSRTE--EYDFSFLNREGDVIIDFSSPNIAKRMHIGHLRSTIIGDSITRIYKYLGYHMI 156

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY------------PGVYLKHV 209
            + +I D G Q   L +    W  ++A   N  +  E  Y                 +  
Sbjct: 157 ADNHIGDWGTQFGKLIIGYRRWLDKEAYKENPIEELERVYVEFSKLSESNPELEEEARLE 216

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K+L D    +  NF    W   +K  S+    K+     K L++  D +  E  +H   
Sbjct: 217 LKKLQD---GDPENFA--LWKEFIK-VSLDEYDKL----YKRLDVHFDTYYGESFYH--- 263

Query: 270 PSPIRDIIDNLARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              ++ +++ L  +G   E     ++  P+      C + +K                  
Sbjct: 264 -PMMQGVVEELVEKGLAVEDDGAKVVFFPEEDNLFPCIVQKK------------------ 304

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
             DG++ Y  +D+A  K K E    + +IY+       + K+   +   +     + ++ 
Sbjct: 305 --DGAFLYSTSDIATIKFKKEAYKINKLIYLTDERQQDHFKQFFKITDMLGWNVEKHHIW 362

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
               +  + DG+    S R G+ I L  ++DE       + ++  KN +L + +  ++ E
Sbjct: 363 FG--IMRFADGV---FSTRKGNVIRLEQLLDE--GKKRAYDIVQEKNPDLSEEEKDQIAE 415

Query: 445 -------------QSKENPVF---------------YVQYAYARCRSIFRQAKDIFPDLD 476
                        Q++++P+                Y+QY+YAR +SI R+A+     + 
Sbjct: 416 VVGVGAIKYADLSQNRQSPIIFEWDKILTFEGNTAPYLQYSYARIQSILRKAESEGKSIT 475

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +D      I  E   D  E  L  H+A +P  +  A+   +P  +A YL++L+  F+  +
Sbjct: 476 YD----KEIKIE---DKLERALANHIAAFPISVLKASETFKPNIIADYLFELSKKFNSFY 528

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     P L        +L   R  +       I  GL+++G+++   M
Sbjct: 529 NSC---PILN----QEDELLYSRALIAKITGETIKDGLSLLGIKTLERM 570


>gi|330445483|ref|ZP_08309135.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489674|dbj|GAA03632.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 576

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 135/605 (22%), Positives = 241/605 (39%), Gaps = 127/605 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100
           G    N  M +++ LG +P   A+ ++  + +D   + V IAG GFIN++L+ ++L +  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVIDCLDLDGIAEKVEIAGPGFINIFLNKAWLAERG 96

Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +    +    E  +N++       +++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EEALKDERLAVNTETAQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQ-------------------INTLALSVFWRYQQALYNNDSDLPE 198
           G+ V R  ++ D G Q                   +N   L  F+R  + LY+ D++  E
Sbjct: 150 GHNVIRANHLGDWGTQFGMLIANMQRKEKEGADVSMNISDLEGFYRESKVLYDEDAEFGE 209

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--H 256
                V     G E           +  EKW  +     V+  +K  + +   LN+    
Sbjct: 210 TARNFVVRLQSGDE-----------YCLEKWKQL-----VEITLKQNQRNYDRLNVSLTD 253

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D  + E  ++   P  + D+ +         +G+       T    D  + +        
Sbjct: 254 DNVMGESMYNDMLPGVVADLKE---------KGLAVESDGATVVYLDEYKNK-------D 297

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLE 368
           G+ +   + K DG Y Y   D+A  K +YE+   D ++Y + S    +       V++  
Sbjct: 298 GEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVLYFIDSRQHQHLMMAWEIVRKAG 357

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++ 
Sbjct: 358 YVPESVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERANK--LIE 407

Query: 429 RKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYAR 460
            KN EL           +     K  + SK                  N   Y+QYAY R
Sbjct: 408 EKNPELSAEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTR 467

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             SIF++A     DL   +    VI      D  E  L+  L ++   +++     +P+ 
Sbjct: 468 VASIFKRANVELADLTQPI----VIT-----DEKEQALLSKLLQFEEAVQSVAREGQPHL 518

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL++LA +F   +      P L   +A  +     RL+L    A  I  GL+++G+E
Sbjct: 519 MCTYLFELAGMFSSFYEAC---PILNADEATKQS----RLKLAMLTAKTIKQGLDLLGIE 571

Query: 581 SPNEM 585
           +   M
Sbjct: 572 TLERM 576


>gi|227890475|ref|ZP_04008280.1| arginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849044|gb|EEJ59130.1| arginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 558

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 257/602 (42%), Gaps = 115/602 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 24  MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKNIAEKIS-DDNFASIQAVGP-YVNF 80

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +G+G  V I+  S N   PM +GH R  V+G+++
Sbjct: 81  AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + +G+ K+L+ V
Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341

Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K  + V L ++++        ++ ++  + 
Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466
              + V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI R
Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     ++  D    N        D     +   LA++P ++E A+   EP  +A Y  
Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASEKFEPSIIAKYAL 507

Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +P 
Sbjct: 508 DLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNAPK 556

Query: 584 EM 585
           EM
Sbjct: 557 EM 558


>gi|315179517|gb|ADT86431.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 577

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 241/585 (41%), Gaps = 86/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKQLGTNPREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  + K  +  I  ++ + N    MHVGH R  ++GD +   + F G++
Sbjct: 97  DAALADE----RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYS 218
           V R  +I D G Q   L ++   R QQ       +L   E +Y         K+L D   
Sbjct: 153 VIRANHIGDWGTQFGML-IANLERVQQESGEVSMELSDLEAFY------RESKKLYD--- 202

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E   F E     +VK   +Q       D  K L +   +  ++ ++ R + S  RD + 
Sbjct: 203 -EDAEFAERARNYVVK---LQGGDAFCLDMWKKL-VDVTMIQNQRNYDRLNVSLTRDDVM 257

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K K   + D D  Q++F        G+ +   + K DG + Y  
Sbjct: 258 GESMYNDMLPGIVADLKEKGLAQED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTT 316

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE  G D ++Y + S    +       V++   V   V+ +     ++L  
Sbjct: 317 TDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLG- 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------VGSD------------ 420
                +DG P K   RAG  + L  ++DE               +G+D            
Sbjct: 376 -----KDGRPFKT--RAGGTVRLADLLDEAEERAKALIESKNPDLGADEKADIATTVAMA 428

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF +A          + 
Sbjct: 429 AVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASIFAKA---------GVS 478

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P N+       +  E  LI  L ++   +++ +   +P+ L  YL++LA  F   +    
Sbjct: 479 PDNLTGDIKITEEKEKALIAKLLQFEEAVQSVSREGQPHILCSYLFELAGQFSSFYEA-- 536

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + A +  +   RL+L    A  I  GL+++G+++   M
Sbjct: 537 ----CPILIAEDESVKQSRLKLAALTAKTIKQGLSLLGIKTLERM 577


>gi|254304104|ref|ZP_04971462.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324296|gb|EDK89546.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 569

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         ++ + IAG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKNNFPYGDVIEKLEIAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G  Y  + + +  KV ++F S N    MH+GH R  ++G+++  +  F GY+V 
Sbjct: 96  NSIKKIGESYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESICRIYKFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRNWLNKEAYEKNAIEELER----VYVKFSDEAEKDPSLEDL 211

Query: 217 YSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL      EE+   + K++  +++ K      K L+I  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITESL-KEYNKLYKRLDIHFDTYYGESFYNDMMADVVK 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D   +     EG          +    D K  LF            + K DG+Y Y 
Sbjct: 271 ELVD--KKIAIDDEG---------AKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K++  +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQVFKITDMLGWDIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   +L+ D+     I 
Sbjct: 426 LSQNKQSDIVFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIELNEDI----EIK 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L 
Sbjct: 481 TENKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533

Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 -----NQDIETLKSRSLLIKKTGEVLKEGLELLGIPVLNKM 569


>gi|269128153|ref|YP_003301523.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313111|gb|ACY99485.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 574

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 147/604 (24%), Positives = 245/604 (40%), Gaps = 114/604 (18%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H    ++AA+ L R LG +P  IA  +V R ++D     V I+G GFINL L    
Sbjct: 29  RRSQHADYQSDAALALVRRLGGNPRDIAARVVERAELDDLCAKVEISGPGFINLTLDNGA 88

Query: 98  LRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           L ++L+   V+G E  G         + +++ + N    MHVGH R  ++GD    L+ +
Sbjct: 89  LGRLLAE--VAGDERLGVARAEVAETITVDYSAPNAAKEMHVGHLRSTIIGDAAVRLLEW 146

Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLP 197
            G+ V R+ ++ D G     L                    L+ F++  +  ++ D    
Sbjct: 147 LGHTVIRQNHLGDWGTPFGMLVEHLLDIGEAEAAHELSVGDLNTFYQAARRKFDADPAFQ 206

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           E     V L   G E   +    L+   ++ +L +              D L A  +  D
Sbjct: 207 ERSRKRVVLLQSGDEATLRLWRMLITESQKYFLAVY-------------DRLGA-TLGPD 252

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            F  E  ++      +  +++ LA  G + E            KC       +F +  +G
Sbjct: 253 DFFGESYYN----DQLESVVEELAELGLLRE--------SEGAKC-------VFPAGFIG 293

Query: 318 DDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG---SDHSGYVKRLEA 369
            D  +PL     KSDG + Y A DLA  + +  +     ++YV+G     H G V +   
Sbjct: 294 RD-GKPLPLIVRKSDGGFGYAATDLATIRHRVRKLHATRLLYVVGLPQQLHLGMVFQTAR 352

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            A  +++     ++    +  L  DG  ++   RAG  + L  +++E  S +    ++  
Sbjct: 353 EAGWLTDPVRAEHIGFGSV--LGSDGKILR--TRAGASVKLMDLLNEAVSRAS--AIIAE 406

Query: 430 KNSEL-------------------LDFDFCKVKE---------QSKENPVFYVQYAYARC 461
           KN EL                    D    +VK+             N   Y+QYA AR 
Sbjct: 407 KNPELDEDARAAVARAVGIGAVKYADLSTDRVKDYVFDYDRMLSFDGNTAPYLQYARARI 466

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SIFR+  +I P  D +   R +I +      +E  L + L  +  +I       E ++L
Sbjct: 467 CSIFRKG-NIEPPRDVE---RVLIAE-----PAERALALQLLAFEGLINQVAQNLEFHRL 517

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A YLY LA+ F   + +         +QA   ++   RL L    A  +  GLN++G+ES
Sbjct: 518 AQYLYGLATAFTSFYEN------CPVLQAEG-EVRTSRLVLCDLTARTLERGLNLLGIES 570

Query: 582 PNEM 585
           P++M
Sbjct: 571 PDQM 574


>gi|307150379|ref|YP_003885763.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980607|gb|ADN12488.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 585

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 237/590 (40%), Gaps = 103/590 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N A+ L++PL   P  IAE +V  ++I    +   IAG GFIN  L  SYL   +
Sbjct: 40  GDYQSNVALSLAKPLKQSPRAIAEQLVKALEISDLCEPPQIAGPGFINFTLKRSYLENQI 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S I+      G        K+ I+F S N    MHVGH R  ++GD LA ++ F G+EV 
Sbjct: 100 S-ILQKDPRLGVEKAAPPQKIVIDFSSPNIAKEMHVGHLRSTILGDCLARILEFRGHEVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   ++ L  G     Y K      A     E  
Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPDALTTANA-LDLGDLVSFYKK------AKIRFDEDE 211

Query: 223 NFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272
            F EE    +VK         ++ Q + +  R + + +    DI + E    RG+   +P
Sbjct: 212 TFKEEARQEVVKLQAGANDSGHAWQLLCEQSRREFQGIYDILDIKLVE----RGESFYNP 267

Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDG 329
            +  I+  L  QG + E              D   K +        +    PL+  KSDG
Sbjct: 268 MLSGILTQLDEQGLLTE--------------DQGAKCVFLEGFTNKEGEPLPLIVQKSDG 313

Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            Y Y   DLA  K + E+     +IYV  +  + +  ++  VA     KKA I     E+
Sbjct: 314 GYNYATTDLAALKYRVEQDQATRIIYVTDAGQANHFAQVFQVA-----KKAGILPENVEV 368

Query: 389 VRLY------RDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V +        DG   K+  R+G+ I L+ ++DE                          
Sbjct: 369 VHVAFGIVKGEDGK--KLKTRSGETIKLKDLIDEAIAHARRDLETRLSSDERTESQEFIN 426

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  ++++  L +       F + K+    + N   Y+ YAYAR +SI R+    
Sbjct: 427 HVAQGVGISAIKYADLSQNRVSDYIFSYDKML-ALQGNTAPYMLYAYARVQSISREGNID 485

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFYLYDLA 529
           F  LD            S   T E +L++   L +   VI++      P +L  YLY+L+
Sbjct: 486 FNQLD---------EGASVLLTEEAELVLSKCLLQLTEVIQDVERDLLPNRLCEYLYELS 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             F+  +      P L+    +   +   RL L    A  +  GL ++G+
Sbjct: 537 KKFNKFYETC---PVLK----SEDPIKTSRLILCDLTAKTLKLGLFLLGI 579


>gi|319654711|ref|ZP_08008790.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393627|gb|EFV74386.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 562

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 249/595 (41%), Gaps = 102/595 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P++ AHG L+      L++     P +IA      I+  P ++    AG  +IN++
Sbjct: 28  LIETPKNPAHGDLAF-PCFTLAKAFRKSPASIAGETACLIQ-GPHIEKAEAAGP-YINIF 84

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            S  S    I+  I+  G EYG+   G G    ++F S N   P  +GH R  V+G+ L 
Sbjct: 85  FSKESAGAVIMEKILNEGKEYGQLNDGAGKTAVLDFSSPNIAKPFSMGHLRSTVIGNALG 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------GYYPGVY 205
           SL    GY   R  ++ D G Q   L ++ + ++       ++ + E       ++    
Sbjct: 145 SLAEKCGYTAVRINHLGDWGTQFGKL-ITAYTKWGSPDKVKENPIKELLSLYIRFHEEAE 203

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDD 264
                ++ A  +  EL N  E+           QA+    R++ LK     +D+     D
Sbjct: 204 ANPALEDEARSWFKELENGNEQ----------AQALWSWFREESLKEFQRVYDMLGIHFD 253

Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            + G+      +  +I+ L  +  + E       ++  Q  D D    L +         
Sbjct: 254 SYNGEAFYNDKMEPVIEELMAKDLLAES----DGAEVVQLPDEDLPPCLIK--------- 300

Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               KSDG+  Y   DLA   Y K  Y+  FD+ +Y++G + S + +++++V   +  + 
Sbjct: 301 ----KSDGATLYATRDLAAAFYRKETYQ--FDHSLYIVGQEQSIHFRQVKSVIKKMGYEW 354

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           A  N+         +DG   KMS R G  I L  V++E                      
Sbjct: 355 AD-NMTHVPFGLYLKDGK--KMSTRKGRVILLEEVLNEAILLAKTNIEAKNPGLENKDEV 411

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
              VG  ++ F  L  KN  + + +F     +  + +  P  Y+QY  AR  S+ R+A D
Sbjct: 412 AEAVGIGAILFHDL--KNDRMNNIEFSLEDMLTFEGETGP--YLQYTNARAYSLLRKADD 467

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           I P  +  L            D+   ++I  L +YP  I  + +   P  LA YL D+A 
Sbjct: 468 I-PSAENGLS-----------DSYSWEIIKLLYQYPEKIRQSYMQLSPSVLAKYLIDVAQ 515

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+ ++       ++R ++ +N      RL LV AV  +++ G+  +G++ P +M
Sbjct: 516 AFNKYYG------QVRILEKDNS--IKSRLALVKAVTIVLSDGMQTLGMKVPRQM 562


>gi|145637830|ref|ZP_01793478.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145268973|gb|EDK08928.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 577

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 139/594 (23%), Positives = 237/594 (39%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++   ++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQHEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVEDDGALVVYLDEFKNKD--------------GDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|260767651|ref|ZP_05876586.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617160|gb|EEX42344.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 577

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 241/585 (41%), Gaps = 86/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKQLGTNPREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  + K  +  I  ++ + N    MHVGH R  ++GD +   + F G++
Sbjct: 97  DAALADE----RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYS 218
           V R  +I D G Q   L ++   R QQ       +L   E +Y         K+L D   
Sbjct: 153 VIRANHIGDWGTQFGML-IANLERVQQESGEVSMELSDLEAFY------RESKKLYD--- 202

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E   F E     +VK   +Q       D  K L +   +  ++ ++ R + S  RD + 
Sbjct: 203 -EDAEFAERARNYVVK---LQGGDAFCLDMWKKL-VDVTMIQNQRNYDRLNVSLTRDDVM 257

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335
             +    +  GI+   K K   + D D  Q++F        G+ +   + K DG + Y  
Sbjct: 258 GESMYNDMLPGIVADLKEKGLAQED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTT 316

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387
            D+A  K +YE  G D ++Y + S    +       V++   V   V+ +     ++L  
Sbjct: 317 TDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLG- 375

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------VGSD------------ 420
                +DG P K   RAG  + L  ++DE               +G+D            
Sbjct: 376 -----KDGRPFKT--RAGGTVRLADLLDEAEERAKALIESKNPDLGADEKADIATTVAMA 428

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF +A          + 
Sbjct: 429 AVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASIFAKA---------GVS 478

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P N+       +  E  LI  L ++   +++ +   +P+ L  YL++LA  F   +    
Sbjct: 479 PDNLTGDIKITEEKEKALIAKLLQFEEAVQSVSREGQPHILCSYLFELAGQFSSFYEA-- 536

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + A +  +   RL+L    A  I  GL+++G+++   M
Sbjct: 537 ----CPILIAEDESVKQSRLKLAALTAKTIKQGLSLLGIKTLERM 577


>gi|197334256|ref|YP_002155601.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690276|sp|B5FC42|SYR_VIBFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197315746|gb|ACH65193.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 577

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 136/600 (22%), Positives = 231/600 (38%), Gaps = 116/600 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKRLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  + K  + NI  ++ + N    MHVGH R  ++GD +   + F G+ 
Sbjct: 97  EAALADK----RLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152

Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201
           VTR  +I D G Q   L                    L  F+R  + LY+ D +      
Sbjct: 153 VTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTAR 212

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             V     G E           F  E W  +V    VQ      R +   +++  D  + 
Sbjct: 213 GYVVKLQSGDE-----------FCAEMWKKLVDVTMVQNQRNYDRLN---VSLTRDNVMG 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++    S +  I+ +L +QG   E       S+  Q   +D  +        G+ + 
Sbjct: 259 ESMYN----SMLAPIVADLQKQGLAVE-------SEGAQVVFLDEYK-----NKDGEPMG 302

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAA 373
             + K DG + Y   D+A  K +YE    D ++Y + S    +       V++   V  +
Sbjct: 303 VIVQKRDGGFLYTTTDIACAKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPES 362

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  KN +
Sbjct: 363 VSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAAK--LIEEKNKD 412

Query: 434 LLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCRSIF 465
           L   +  K+               K ++ +             N   Y+QYAY R  SIF
Sbjct: 413 LPAEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIF 472

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +A      L  D     V       D  E  L+  L ++   ++      +P+ +  YL
Sbjct: 473 SKA-----GLSMDELTGEVKIT----DEKEKALVAKLMQFEEAVQAVASEGQPHLMCAYL 523

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++LA  F   +           +   +  +   RL+L    A  I  GL ++G+E+   M
Sbjct: 524 FELAGQFSSFYEA------CPILNNEDDAVKQSRLKLAALTAKTIKQGLELLGIETLERM 577


>gi|328473382|gb|EGF44230.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 577

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 137/603 (22%), Positives = 237/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100
           G    N  M +++ LG +P   A+ ++  + ++       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLNGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +  S +    E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  DAALADSRLGVAAEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214
           G++V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A
Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208

Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261
            K  + ++       F  E W  +V    +Q         + + RDD+   ++ +D+   
Sbjct: 209 VKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDM--- 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318
                      +  I+ +L  QG   E                D  Q++F        G+
Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 300 AMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  K
Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409

Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462
           N EL           +     K  + SK                  N   Y+QYAY R  
Sbjct: 410 NPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF +A     +L  D+            D  E  LI  L ++   +++     +P+ + 
Sbjct: 470 SIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           + A +  +   RL+L    A  I  GL+++G+E+ 
Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIETL 574

Query: 583 NEM 585
             M
Sbjct: 575 ERM 577


>gi|260103236|ref|ZP_05753473.1| arginine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260082949|gb|EEW67069.1| arginine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 561

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 252/599 (42%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +  S+   G  ++N  
Sbjct: 25  LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    L    L  I+     YG    G+G  + I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHEKLVSSTLKDILSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             M   GY   +  Y+ D G Q   L  +    Y+   + N+ D+ +     ++  +V  
Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192

Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256
               ++  E  N PE      +W   ++D   +A  + K  R    +D     K L +  
Sbjct: 193 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM            
Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 287

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370
            D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V     
Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K  + V L ++++        ++ ++  D      
Sbjct: 347 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAISLAKKQIEEKNPDLADKDQ 405

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +S+ R+A 
Sbjct: 406 VAHDVGVGAVIFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 461

Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +                E +F   D     +   LA++PR+I  +    EP  +A +  
Sbjct: 462 AMGEKR-----------SEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           DLA  F+ ++++      ++ +  +++     RL LV A + ++   L ++GV +P EM
Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 561


>gi|226946552|ref|YP_002801625.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511638|sp|C1DHR7|SYR_AZOVD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226721479|gb|ACO80650.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 579

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 233/575 (40%), Gaps = 91/575 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P GL P  +AE +VA +  D  V  V IAG GF+N 
Sbjct: 30  IQVENTKDKSHGDFASNIAMMLAKPAGLKPRQLAEKLVAALPADASVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L + L  + ++    G    G   +V ++  S N    MHVGH R  ++GD +A
Sbjct: 90  FQNSDALARRL-EVALADERLGVRKHGDLQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L L+       +  +  +DL + Y           
Sbjct: 149 RVLEFLGDVVIRQNHVGDWGTQFGML-LAHLEEKPASAESELADLEQFY----------- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
             A K   E   F +     +V+  + +     +     A+++ H         + ++ D
Sbjct: 197 RAAKKRFDESEAFADRARELVVRLQAGEPECLRLWQRFNAISLSHCQEVYERLGVRLTPD 256

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D  RG+ +    +  I+  L  +G + E       S+  Q   +D     FR+   G+ +
Sbjct: 257 DI-RGESAYNDELPGIVQALRDKGLLTE-------SEGAQCVFLDE----FRNAE-GNPL 303

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSE 376
              + K+ G Y Y   DLA  + + +    D ++Y +    + + +   AV   A  V +
Sbjct: 304 PVIVQKAGGGYLYATTDLASMRYRSQVLKADRVLYFVDQRQALHFQMTFAVARRAGFVRD 363

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
             A  ++    +     DG P K   R G  + L  ++DE                    
Sbjct: 364 DTALEHMGFGTMNGA--DGRPFKT--RDGGTVKLIDLLDEAEQRAYALVKGKNPELPEEE 419

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    F+F ++    + N   Y+ YAY R  S+FR+  
Sbjct: 420 LRHIARAVGIGAVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYAYTRVASVFRKLG 478

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               ++D    P             EL L   LA++  V+ N      P+ L  YLYDLA
Sbjct: 479 REIDEIDGSPAPEA---------GQELALAARLAQFGEVLGNVAEKGLPHLLCAYLYDLA 529

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          R+  RL       R L
Sbjct: 530 GLFSSFYENCPILTADTPARQQSRLLLAALTGRTL 564


>gi|284929097|ref|YP_003421619.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809556|gb|ADB95261.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 584

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 256/604 (42%), Gaps = 110/604 (18%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           +D  H     N A  L++ L   P  I+++I+  + + P  ++  I G GFINL +   Y
Sbjct: 35  KDTRHADYQVNIAFSLAKKLKKKPQEISQIIIGNLPVSPVYETPSIGGPGFINLRIKKGY 94

Query: 98  LR---KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           L    K+L      GI    N      K+ ++F S N    MHVGH R  ++GD+L+ ++
Sbjct: 95  LEDQIKLLCEDERLGILKTHN----SQKIIVDFSSPNIAKEMHVGHLRSTIIGDSLSRIL 150

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVG 210
            F G+++ R  ++ D G Q   L   +   +  ALY  +     DL   Y          
Sbjct: 151 EFIGHDILRLNHVGDWGTQFGMLISYLKEVFPNALYEANVLQIEDLVSFYRK-------- 202

Query: 211 KELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              A K   E + F E     +VK     +   +A   +     +   + +DI   E   
Sbjct: 203 ---AKKRFDEDIQFQEISREAVVKLQLGNEEYRKAWKLLCEQSRREFQVIYDILQIELT- 258

Query: 266 HRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDD 319
            RG+   +P + +I+++L +Q  +        +     KC       +F    +   G+ 
Sbjct: 259 ERGESFYNPFLEEIVNDLDKQKIL--------EISDGAKC-------VFLEGFINKSGNP 303

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFD---NMIYVMGSDHSGYVKRLEAVA--AAV 374
           +   + KSDG Y Y   DLA    KY    D   ++IYV  +  S +  ++  +A  A  
Sbjct: 304 LPLIVQKSDGGYNYATTDLAAL--KYRINIDKAKHIIYVTDAGQSNHFAQVFQIAQRAGF 361

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
             ++  ++ +   LV+   DG   K+  R+G+ I L+ ++D+                  
Sbjct: 362 LREETSVSHIPFGLVK-GEDGK--KLKTRSGETIRLKDLLDKSIYQARKNLENRLKTENR 418

Query: 417 -------------VGSDSVRFMMLWR-KNSELLDFDFCKVKEQS-KENPVFYVQYAYARC 461
                        VG  SV++  L + +NS   D+ F   K  S + N   Y+ YAYAR 
Sbjct: 419 EESQEFINNVANVVGIGSVKYADLSQNRNS---DYIFSYDKMLSLQGNTAPYMLYAYARI 475

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           +SI R+ K  +  L+     + ++  E+E D +  + ++ L E   +IEN  +   P +L
Sbjct: 476 KSILREEKINYAALE---NTQVILQDEAEIDLA--KYLLQLNEVIEIIENTLL---PNRL 527

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YLY+L+  F+  + +    P L+ V +        RL L    A  +  GL+++G++ 
Sbjct: 528 CEYLYELSKRFNRFYENC---PVLKSVDSTK----FSRLVLCDLTARTLELGLSLLGIDV 580

Query: 582 PNEM 585
              M
Sbjct: 581 LERM 584


>gi|290890974|ref|ZP_06554038.1| hypothetical protein AWRIB429_1428 [Oenococcus oeni AWRIB429]
 gi|290479373|gb|EFD88033.1| hypothetical protein AWRIB429_1428 [Oenococcus oeni AWRIB429]
          Length = 572

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 257/596 (43%), Gaps = 97/596 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91
           ++E+P+   +G  +      LS+   L P  +A  I  R+ K D + + +   G  +IN 
Sbjct: 31  LVEKPKMLKNGDYAF-PVFGLSKIFHLSPDQVAFSIYNRLNKSDTNFEKIEHNG-AYINF 88

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L        L S +++   YG+N  G    + +E  S N   PM +GH R  ++G++L+
Sbjct: 89  FLDRKREASTLISDIINNDSYGKNNAGNKKTIIVELSSPNIAKPMSMGHLRSTMIGESLS 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK-HV 209
            +   +GY+  +  ++ D G Q   +  +   W  +  +  N  D     Y  +  +   
Sbjct: 149 RIANENGYKTIKINHLGDWGTQFGLMIEAYKLWGNKDIIEQNPVDELVKLYVRINKEAET 208

Query: 210 GKELADKYSSELLNF----PEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             EL++   S         PE     KW    K+ S++   K+     + L +  D    
Sbjct: 209 NPELSEAGRSWFKKLEDGDPEARELWKWF---KNVSLREFNKV----YQRLGVTFDSMNG 261

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F++   S I D++ N        +GIL   +S+  Q  D+      +   +      
Sbjct: 262 ES-FYQDKMSVIIDLLKN--------KGILT--ESRGAQIVDLPSLLPAYNLPV------ 304

Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
             +L+SDG+  Y   DLA   Y +  Y   FD  +YV+G++   Y K+++A+      K 
Sbjct: 305 SIILRSDGATQYATRDLATAFYRQTTYH--FDKCLYVVGAEQKEYFKQIKAIL-----KL 357

Query: 379 AQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVD-------------------- 415
           A  N    ++  +Y   +     KMS R G+ + L  V+D                    
Sbjct: 358 AGFN-WSDDMEHIYFGLITFNGKKMSTRKGNVVKLEQVLDSAHKLAKNQIAEKNPNLSNS 416

Query: 416 -----EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAK 469
                +VG+ +V F  L    +  +DFD  + VK +    P  YVQY + R  SI R++ 
Sbjct: 417 DKVAEQVGTGAVIFNDLMNDRTLSIDFDLDQIVKFEGDTGP--YVQYTHVRAVSILRKSS 474

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            I  D++  +            D     ++  L+ YP +++ A I +EP  +A YL +LA
Sbjct: 475 -IKIDINDAI---------KLLDNDSWAVVSKLSVYPDIVKRAWILREPSIIAKYLLNLA 524

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++S          +   +++L+  RL LV AVA ++  GL ++ V++P++M
Sbjct: 525 HEFNSYYSKVH-------ILVEDKQLS-SRLALVDAVAIVLKKGLELLDVQAPDQM 572


>gi|291617771|ref|YP_003520513.1| ArgS [Pantoea ananatis LMG 20103]
 gi|291152801|gb|ADD77385.1| ArgS [Pantoea ananatis LMG 20103]
          Length = 576

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 235/597 (39%), Gaps = 111/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG  P  +AE ++  + +      V IAG GFIN++L   +L    
Sbjct: 37  GDYQANGIMAVAKKLGQAPRQLAETVIQHLDLTGIASKVEIAGPGFINIFLDRGWL---- 92

Query: 103 SSIVVSGIEYGRNLIG---------KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
                   E+ RN +          +   + +++ + N    MHVGH R  ++GD     
Sbjct: 93  -------AEHARNALQHPRLGVACVEPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRT 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +AF G+ V R  ++ D G Q   L    F   QQ    N +++      G Y +      
Sbjct: 146 LAFLGHNVIRANHVGDWGTQFGMLI--AFLEKQQN--ENHAEMALADLEGFYRE------ 195

Query: 214 ADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FH 266
           A +   E   F E     +VK     DY  Q   K++           DI +S++   + 
Sbjct: 196 AKRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLV-----------DITMSQNQHIYD 244

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRP 323
           R + +  R  +   +    +  GI+   K+K     + +   ++F        G+ +   
Sbjct: 245 RLNVTLTRKDVMGESLYNDMLPGIVADLKAKGL-AVESEGATVVFLDEYQNKEGEPMGVI 303

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVS 375
           + K DG Y Y   D+A  K +YE    D +IY + S    +       V++   V  +V 
Sbjct: 304 IQKKDGGYLYTTTDIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYVPESVP 363

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +     ++L       +DG P K   R+G  I L  ++DE                   
Sbjct: 364 LEHHAFGMMLG------KDGRPFKT--RSGGTIKLSDLLDEAYDRAYSLVSEKNPEMSEE 415

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A
Sbjct: 416 ERRALAEVVGVSAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKA 474

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 ++ D    ++    +  D  E  L   L ++  VI        P+ +  YLYD+
Sbjct: 475 -----GIEADAIQADI----TLTDDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDV 525

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F G + H         + A +      RLQ+    A  +  GL+ +G+++ + M
Sbjct: 526 AGLFSGFYEH------CPILAAEDEATRQSRLQIAALTAKTLKLGLDTLGIKTVDRM 576


>gi|148978252|ref|ZP_01814770.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962553|gb|EDK27830.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 577

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 130/604 (21%), Positives = 235/604 (38%), Gaps = 124/604 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D     V IAG GF+N++L  ++L K  
Sbjct: 37  GDYQANGVMGVAKRLGTNPREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDEAFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        +   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  DAALADSRLGV-----AAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGY 200
           +V R  +I D G Q   L                    L  F+R  + LY+ D +     
Sbjct: 152 KVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLYDEDEEFAVKA 211

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
              V     G E           F  E W  +V    +Q                     
Sbjct: 212 RGYVVKLQSGDE-----------FCAEMWKKLVDVTMIQ--------------------- 239

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVG 317
           ++ ++ R + S  RD +   +   ++  GI+   K +   K D D  Q++F        G
Sbjct: 240 NQRNYDRLNVSLTRDDVMGESMYNHMLPGIVADLKEQGLAKED-DGAQVVFLDEYKNKDG 298

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369
           D +   + K DG + Y   D+A  K ++E  G D ++Y + S    +       V++   
Sbjct: 299 DPMGVIIQKRDGGFLYTTTDIACAKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGY 358

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  
Sbjct: 359 IPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIES 408

Query: 430 KNSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461
           KN EL +                +  + +    + VF              Y+QYAY R 
Sbjct: 409 KNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRV 468

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+F +A      L+ ++     I +E      E  LI  L ++   +++     +P+ +
Sbjct: 469 ASVFAKAGVSMDSLEGEI----KITEE-----KEKALIAKLLQFEEAVQSVAREGQPHIM 519

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL++LA  F   +           + A +  +   RL+L    A  I  GL+++G+E+
Sbjct: 520 CSYLFELAGQFSSFYE------ACPILIAEDEAVKQSRLKLAALTAKTIKQGLSLLGIET 573

Query: 582 PNEM 585
              M
Sbjct: 574 LERM 577


>gi|300173164|ref|YP_003772330.1| arginyl-tRNa synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887543|emb|CBL91511.1| arginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 563

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 250/590 (42%), Gaps = 91/590 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IVA+I      + V   G  ++N +L
Sbjct: 27  LETPKSSEMGDVAF-PTFTLAKVLHQAPQQIATDIVAKIN-QTGFEKVVAIGP-YVNFFL 83

Query: 94  -SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P    KIL  I+     +G N  G G  V I+  S N   PM +GH R  V+G+ LA+
Sbjct: 84  DKPVTSGKILRLILKEQSHFGSNTDGNGNNVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           + A +GY   +  ++ D G Q   L       Y    + +++++     P   L     E
Sbjct: 144 ITAKNGYVPVKINHLGDWGTQFGKLI------YAYKTWGSETEVKAD--PIATLLRYYVE 195

Query: 213 LADKYSSE-LLNFPEEKWLPIVKDYSVQA--MMKIIR-DDLKALNIQHD-IFISEDDFHR 267
             +K  ++  LN     W   ++D   +A  + +  R + LK     +D + I+ D F+ 
Sbjct: 196 FHEKAKNDDTLNDAGRAWFKKLEDGDSEAHQLWQWFRAESLKEFTAIYDRLDITFDSFN- 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D L  +G +         S+  +  D+          M+        
Sbjct: 255 GEAFYNDKMAKVVDVLEEKGLLVS-------SQGAKIVDLSAINSSLTPAMIK------- 300

Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            +SDG+  Y   DLA   Y K  Y   F   +YV+G +   +  +++AV + +    A  
Sbjct: 301 -RSDGATLYMTRDLAAAVYRKETYH--FSKSLYVVGGEQREHFVQMKAVLSLMGFTWAD- 356

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------E 416
           +V       +  +G   KMS R GD + L+ V+D                         +
Sbjct: 357 DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPALENKNIVAEQ 414

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG+ +V F  L    +   DF+  +V + +    P  YVQY  AR +SI R++     D 
Sbjct: 415 VGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKSGVTIVDQ 472

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + DL            D +   ++  L  +P  ++ A   +E   +A Y  +L+  F+ +
Sbjct: 473 NLDLD-----------DVATWDIVTILNSFPETVQRAWQQREASIVAKYALNLSRSFNRY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++ +       +  N+++L   RL LV +V+ +++  L ++GV+SP EM
Sbjct: 522 YANSK-------ILTNDQQLNA-RLALVQSVSIVLSESLRLLGVKSPEEM 563


>gi|332289781|ref|YP_004420633.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432677|gb|AEC17736.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 575

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 137/589 (23%), Positives = 247/589 (41%), Gaps = 81/589 (13%)

Query: 36  RPRDCAH-GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           RP   A  G    N  M  ++ L + P  +A+ +V  + +   ++ V IAG GFIN++L+
Sbjct: 29  RPSSKAQFGDYQANGVMAAAKKLAMPPRDLAQKVVENLDLGEMIEKVEIAGPGFINIFLN 88

Query: 95  PSYLRKILSSIVVSGIEYGRNLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           P++L    + ++         LI   K   +  ++ + N    MHVGH R  ++GD +  
Sbjct: 89  PAWLATQTNKMLADH----HFLIAPVKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVR 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGK 211
            + F G+ V R  ++ D G Q       +   Y + + N N SD+        Y +    
Sbjct: 145 TLEFVGHNVIRANHVGDWGTQ-----FGMLIAYLEKMQNENASDMELSDLEAFYRE---- 195

Query: 212 ELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             A K+  E   F E+    +VK     +Y  +   K++   +K          ++ ++ 
Sbjct: 196 --AKKHYDEDEVFAEKARGYVVKLQGGDEYCRKMWRKLVDITMKQ---------NQRNYD 244

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
           R + +     +   +    +  GI+   ++K     D D   ++F +      GD +   
Sbjct: 245 RLNVTLTDKDVMGESLYNPMLPGIVADLEAKGLAVKD-DGAVVVFLNEFKNKEGDPLGVI 303

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVS 375
           + K DG Y Y   D+A  K +YE    D ++Y   S  S +       V++   V  +V+
Sbjct: 304 IQKKDGGYLYATTDIACAKYRYETLHADRILYFTDSRQSQHLQQVWLIVRKAGYVPESVT 363

Query: 376 EKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFITLR----------HVVDE 416
                  ++L +  + +  R G  +K++       +RA   I+ +           V + 
Sbjct: 364 WDHFNFGMMLGKDNKPFKTRTGGTVKLADLLDEAVERAEKLISEKSTNLSAEEQHQVAEV 423

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF  +        
Sbjct: 424 VGIGAVKYADLSKNRTTDYVFDWDNML-TFEGNTAPYIQYAYTRIRSIFANS-------- 474

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             + P+ +  +    D  E QL + L ++   I        P+ L  YLYDLA  F   +
Sbjct: 475 -GIDPQQLAGEIQIKDDKERQLALTLLKFEEAINTVVKEGTPHVLCAYLYDLAGAFSSFY 533

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            H    P L   QA   K +  RL+L    A ++  GL+++G+++  +M
Sbjct: 534 EHC---PILN--QAEEVKQS--RLKLAALTAKVLKQGLDLLGIKTVEKM 575


>gi|312865751|ref|ZP_07725973.1| arginine--tRNA ligase [Streptococcus downei F0415]
 gi|311098626|gb|EFQ56848.1| arginine--tRNA ligase [Streptococcus downei F0415]
          Length = 563

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 142/590 (24%), Positives = 253/590 (42%), Gaps = 89/590 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+      L++ L   P  IA  +V +I+ D   + V   G  +IN +
Sbjct: 26  LLEVPKNSSMGDLAF-PVFSLAKVLRKAPQAIASELVEKIQSDK-FEKVQAVGP-YINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+   + + +L+ ++    +YG+  +G+   + I+  S N   P  VGH R  V+GD+LA
Sbjct: 83  LNKQEISQAVLAEVIAKDKDYGQQELGQCKNITIDMSSPNIAKPFSVGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +    GY+  +  ++ D G Q   L ++   W  + A+       P      +Y++ + 
Sbjct: 143 KIFEKIGYKSVKINHLGDWGKQFGMLIVAYKKWGDEGAVRAT----PINELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267
           KE     S   L+     W   ++  D    ++ +  RD+ L   N  +D+   + D + 
Sbjct: 198 KEAE---SQPELDEEARDWFRKLEAGDQEAISLWQWFRDESLVEFNRLYDLLRVQFDSYN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +++  L  +  + E       S+  Q   +D+             ++ P 
Sbjct: 255 GEAFYNDKMDEVVTLLEDKDLLQE-------SQGAQVVKLDKY-----------GIENPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ + + K+L+AV   +    +
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQAAHFKQLKAVLKEMDYDWS 354

Query: 380 QINVLLCELVRLYRDGMPIKMS---------------KRAGDFITLRH--------VVDE 416
             ++       + +DG  +                  KRAGD I  ++        V   
Sbjct: 355 D-DITHVPFGLVTKDGKKLSTRKGNVILLEPTIAEAIKRAGDQIEAKNPDLPNKEAVAQA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +++F  L        DFD    V  + +  P  YVQYAYAR +SI R+A       
Sbjct: 414 VGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGETGP--YVQYAYARIQSILRKA------- 464

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           DF   P      +   D    ++I  +  +P  I+ A    EP  +A +   LA  F+ +
Sbjct: 465 DFKADPAVGYYLD---DAESWEIIKLIQNFPAAIKRAADNFEPSIIAKFAISLAQAFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H R        Q+  R     RL L +  A ++   L ++GV++P+EM
Sbjct: 522 YAHNR-----ILDQSPERD---SRLALSYTTALVLKEALRLLGVDAPDEM 563


>gi|116629130|ref|YP_814302.1| arginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094712|gb|ABJ59864.1| arginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 564

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 30  MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKEIAEKIS-DDNFTSIEAVGP-YVNF 86

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +GKG  V I+  S N   PM +GH R  V+G+++
Sbjct: 87  AIDHAKLVNATLNDVLTEKDHFGDQQLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 146 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 199

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 200 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 252

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 253 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 291

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + SG+ K+L+ V
Sbjct: 292 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 347

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410
              +    A  N+       + + G   K+S R G+ + L                    
Sbjct: 348 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 404

Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464
                  V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI
Sbjct: 405 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 462

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     ++  D    N        D     +   +A++P ++  A+   EP  +A Y
Sbjct: 463 LRKAN---KEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKY 511

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +
Sbjct: 512 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 560

Query: 582 PNEM 585
           P EM
Sbjct: 561 PKEM 564


>gi|226311784|ref|YP_002771678.1| arginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094732|dbj|BAH43174.1| arginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 571

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 249/603 (41%), Gaps = 112/603 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P + A G ++      L++ L   P  IA  +  ++   P  +S  +    ++NL+
Sbjct: 31  MLETPPNPAMGDVAF-PCFQLAKALRKAPPMIAAELAGQLSGAPLRESHAVGP--YVNLF 87

Query: 93  L-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   +   +++ +I+  G  YG + +G+G KV I+  S N   P  +GH R  V+G+ +A
Sbjct: 88  LDQENVAEQVIGTILTQGSTYGSSHVGEGRKVPIDLSSPNIAKPFSMGHLRSTVIGNAIA 147

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQALYN 191
           ++M   GY+  R  ++ D G Q   L                     LS++ R+ + + N
Sbjct: 148 NIMEKQGYDPVRINHLGDWGTQFGKLIVAYRLWGDEAKVKAEPIKELLSLYVRFHEEVEN 207

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           + +   +G     + K +  E  D+ +  L      KW    +D S++  MKI      A
Sbjct: 208 DPTLEDQGRE---WFKKL--EDGDEEAQHLW-----KWF---RDESLKEFMKIYDLMNVA 254

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +  H      D   R        ++  L  +G + E       S      ++D   +  
Sbjct: 255 FDSTHGEAFYNDKMDR--------VVTLLEEKGLLTE-------SDGAMVVNLDEYNM-- 297

Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
                      P L  KSDG+  Y   DLA    ++E   F   +YV+G++   + ++L 
Sbjct: 298 ----------PPCLIKKSDGATLYATRDLAAALFRHESYDFAKALYVVGNEQRLHFQQLY 347

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            V   +    +  N+       + +DG   KMS R G  + L  V+ +            
Sbjct: 348 KVLEKMGYAWSA-NMHHIPFGMMLKDGK--KMSTRKGKVVLLEEVLAQAISDVQKVIEEK 404

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCR 462
                        VG  +V F  L  KN  L D +F   +  + E     YVQYA+AR  
Sbjct: 405 NPTLSTKEEVARQVGVGAVIFHDL--KNFRLNDVNFSWEEMLTFEGETGPYVQYAHARAC 462

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+ R+     P    +L    +  +E+        +I  L  +P VIE A    +P ++ 
Sbjct: 463 SLLRRG-GYQPATTVNLASGALDSKEA------WAVITLLNAFPEVIERAADNFDPSQIG 515

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+ DLA  F+  +++ R       + A    +T  RLQLV AV +++  GL ++G+ +P
Sbjct: 516 KYVIDLAQTFNKFYANVR-------ILAEEEDVTASRLQLVAAVVAVLKEGLRLLGLAAP 568

Query: 583 NEM 585
            EM
Sbjct: 569 EEM 571


>gi|312958530|ref|ZP_07773050.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311287073|gb|EFQ65634.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 578

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 131/573 (22%), Positives = 242/573 (42%), Gaps = 88/573 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+LS+P G+ P  +AE I+A +  D  V    IAG GFIN 
Sbjct: 30  IQVENTRDKTHGDFASNIAMMLSKPAGMKPRDLAEKIIAALPADESVTKAEIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +    + G    G+  +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTQALASRLDAALADA-KIGARKAGEVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHVG 210
            ++ F G  V R+ ++ D G Q   L  S+    +  + +N+ SDL   Y          
Sbjct: 149 RVLEFLGDSVIRQNHVGDWGTQFGMLMASL---QENPITSNELSDLENFYRAAKKRFDES 205

Query: 211 KELADKYSSEL--LNFPEEKWLPI---VKDYSV---QAMMKIIRDDLKALNIQHDIFISE 262
           ++ AD+    +  L   + + L +    +D S+   Q + +++   L   ++  +   ++
Sbjct: 206 EDFADRARGLVVKLQAGDAECLALWNRFRDISLSHCQEIYELLNVKLTMADVMGESAYND 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           D         + +++++L  +G + E       S   Q   ++     F+ T  G+ +  
Sbjct: 266 D---------LINVVNDLKAKGLLVE-------SNGAQCVFLEE----FK-TADGEPLPV 304

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            ++K+DG Y Y   DLA    +Y  G    D  +Y +    + + +++  VA        
Sbjct: 305 IIVKADGGYLYATTDLA--AVRYRSGVLKADRALYFVDQRQALHFQQVFEVARRAGFVTH 362

Query: 380 QINVLLCELVRL---------YRDGMPIKM-------SKRAGDFIT----------LRHV 413
            +++       +          RDG  +K+         RA + +           LR++
Sbjct: 363 PMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLNEAQDRAYNLVKEKNPELAEADLRNI 422

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+    F 
Sbjct: 423 ARVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLGKDFS 481

Query: 474 DLDFDLFPRNVI--PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           +++     R V+  P E E       L   LA+   V+ +      P+ L  YLY++A +
Sbjct: 482 EVE----GRIVLDAPHEQE-------LAAKLAQLGEVLNSVGEKGTPHILCTYLYEVAGL 530

Query: 532 FHGHWSH---------GRENPRLRFVQANNRKL 555
           F   + +          ++  RLR      R L
Sbjct: 531 FSSFYENCPILTADDEAQKQSRLRLAALAGRTL 563


>gi|300788535|ref|YP_003768826.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299798049|gb|ADJ48424.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 574

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 240/593 (40%), Gaps = 90/593 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V   PRD        N AM L + LG  P  +A LI   +++D   D   ++G GF+N 
Sbjct: 33  LVQASPRDGVD--YQANLAMSLGKQLGRPPREVAGLIAGALELDGIADPPEVSGPGFLNF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L +  +  ++     G     +  ++ +++ S N    MHVGH R +V+GD LA
Sbjct: 91  SLRTEWL-EARTGALLGDPRLGVPETTEPRRIALDYSSPNVAKEMHVGHLRSSVIGDALA 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L+ F+G+EV    ++ D G     L   +             D+P G      L    +
Sbjct: 150 RLLRFAGHEVLPHNHLGDWGTPFGMLIEHLL------------DVPAGQRAIADLDAFYR 197

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263
           E   K+ S+   F       +VK  S       +  +L   + +H         I +++ 
Sbjct: 198 EARRKFDSD-EAFATRARTRVVKLQSGDEDTLAVWQELVDESTRHFNEVYALLGISLTDK 256

Query: 264 DFHRGDP--SP-IRDIIDNLARQGY--VYEG-ILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D + G+   +P +  +ID+L   G   V  G I   P+  + ++   DR  L+ R     
Sbjct: 257 DIY-GESYYNPYLATVIDDLEAAGLTEVSNGAICVFPEGFSNREG--DRLPLIVR----- 308

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGS------------------ 358
                   K DG Y Y A DLA  +    ERG  +++YV+G+                  
Sbjct: 309 --------KRDGGYGYAATDLATVRYWTAERGATDLLYVVGTPQAQHFAMVFATCRAAGW 360

Query: 359 -----DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
                +H G+   L A   A+  +  +   L   L         +   +   D      V
Sbjct: 361 LTGHAEHVGFGTVLGADGKAMRTRAGETVKLADLLTEAVTQAAAVVTERSELDAAGQAEV 420

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIF 472
              VG  +V++  L        D+ F   +  + E N   Y+QYA+AR +S+ R+A  + 
Sbjct: 421 ARAVGIGAVKYADL--SGDRERDYVFAWDRMLAYEGNTSVYLQYAHARTQSLLRKAGGL- 477

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                   P     Q +    +E  L + L  +   ++ AT    P+KL  YLY+ A  F
Sbjct: 478 --------PEGT--QVALEAPAERALALKLLRFGEALKAATSGYAPHKLCTYLYETAVAF 527

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +    E P L+   A++  L   RL+L    +  +  GL+++G+E+P+ +
Sbjct: 528 SRFFE---ECPVLK---ASSPSLRASRLRLTTLTSHTLALGLSLLGIEAPDRL 574


>gi|238852513|ref|ZP_04642925.1| arginine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834860|gb|EEQ27085.1| arginine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 558

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 24  MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIN-DDNFTSIEAVGP-YVNF 80

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +GKG  V I+  S N   PM +GH R  V+G+++
Sbjct: 81  AIDHAKLVNATLNDVLTEKDHFGDQQLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 194 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + SG+ K+L+ V
Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 341

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410
              +    A  N+       + + G   K+S R G+ + L                    
Sbjct: 342 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 398

Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464
                  V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI
Sbjct: 399 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 456

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     ++  D    N        D     +   +A++P ++  A+   EP  +A Y
Sbjct: 457 LRKAN---KEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKY 505

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +
Sbjct: 506 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 554

Query: 582 PNEM 585
           P EM
Sbjct: 555 PKEM 558


>gi|308051227|ref|YP_003914793.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307633417|gb|ADN77719.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 582

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 137/606 (22%), Positives = 242/606 (39%), Gaps = 103/606 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ ++R +D +HG L+TN AM+L++P G +P  +A LI+  +     V    IAG GFIN
Sbjct: 29  RLQVDRTKDKSHGDLATNLAMMLAKPAGKNPRELAGLIIDNLPESTLVAKTEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L   +L K + +I  S        I     +  ++ + N    M V H R  V+GD +
Sbjct: 89  FFLDAGWLGKQIETI-ASDDRANVAPIAAPQTIVTDYSAPNVAKEMAVHHIRSTVIGDAV 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNN 192
              + F G+ V R  +I D G Q   L                   L  F+R  +  Y+ 
Sbjct: 148 TRTLEFLGHNVVRANHIGDWGTQFGMLIAYLEKMENESAADMDLSDLEAFYREAKKCYDE 207

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D +  E     V     G E  +    +L++                A  + I D L  +
Sbjct: 208 DGEFAERARNYVVKLQGGDEYCNAMWRKLVDI-------------TMAQNQAIYDRL-GV 253

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           ++ +D  + E  ++   P    +I+ +L +QG   E              D   K ++F 
Sbjct: 254 SLSNDDIMGESLYNPMLP----EIVADLTKQGLAVE--------------DQGAK-VVFL 294

Query: 313 STMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
               G D   +   + K DG + Y   D+A  K + +    D ++Y + S  + ++++  
Sbjct: 295 DEFKGKDGNPMGVIIQKRDGGFLYTTTDIAAAKYRVDTFAADRILYFIDSRQAQHLQQAW 354

Query: 369 AVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            +A              C   + L +DG P K   R+G  + L  +++E    + +  ++
Sbjct: 355 LIARKAGYLPDTTTTEHCAFGMMLGKDGKPFKT--RSGGTVKLADLLEEAHQRATK--LI 410

Query: 428 WRKNSEL----LDFDFCKVKEQS------------------------KENPVFYVQYAYA 459
             KN +L    LD     V   S                        + N   Y+ YA++
Sbjct: 411 GEKNPDLQGDALDTIAATVAMASVKYSDLSKNRTTDYVFDWDNMLTFEGNTAPYMLYAFS 470

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R +SIFR+A     +L+  +    V+  +      E  L   L ++   ++       P+
Sbjct: 471 RIQSIFRKAGVNAAELNGTV----VLAHD-----KEEALAQKLVQFNDAVQGVANKGMPH 521

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YLY+LA  F   +      P  +   A + K +  RL+L  A A+ +  GL ++G+
Sbjct: 522 LMCTYLYELAGAFMSFY---EACPINKDDVAEDAKAS--RLRLCAATANTLKVGLGLLGI 576

Query: 580 ESPNEM 585
            + + M
Sbjct: 577 NTLDRM 582


>gi|282851111|ref|ZP_06260485.1| arginine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282558063|gb|EFB63651.1| arginine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 535

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 1   MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKEIAEKIS-DDNFTSIEAVGP-YVNF 57

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +GKG  V I+  S N   PM +GH R  V+G+++
Sbjct: 58  AIDHAKLVNATLNDVLTEKDHFGDQQLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 116

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 117 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 170

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 171 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 223

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 224 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 262

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + SG+ K+L+ V
Sbjct: 263 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 318

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410
              +    A  N+       + + G   K+S R G+ + L                    
Sbjct: 319 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 375

Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464
                  V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI
Sbjct: 376 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 433

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     ++  D    N        D     +   +A++P ++  A+   EP  +A Y
Sbjct: 434 LRKAN---KEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKY 482

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +
Sbjct: 483 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 531

Query: 582 PNEM 585
           P EM
Sbjct: 532 PKEM 535


>gi|163802523|ref|ZP_02196415.1| arginyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173606|gb|EDP58425.1| arginyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 577

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 236/601 (39%), Gaps = 118/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS ++L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEAFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        K   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  EAALADSRLGV-----TADKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216
           +V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A K
Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210

Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263
             + ++       F  E W  +V    +Q         + + RDD+   ++ +D+     
Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM----- 265

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                    +  I+ +L  QG   E                D  Q++F        G+ +
Sbjct: 266 ---------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372
              + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V  
Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEEMGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  KN 
Sbjct: 362 TVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411

Query: 433 EL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSI 464
           EL           +     K  + SK                  N   Y+QYAY R  S+
Sbjct: 412 ELAAEEKQAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASV 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A     DL  ++            D  E  LI  L ++   +++     +P+ +  Y
Sbjct: 472 FAKAGVSMDDLRGEI---------KVTDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA  F   +           + A +  +   RL+L    A  I  GL+++G+++   
Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDESVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576

Query: 585 M 585
           M
Sbjct: 577 M 577


>gi|332662973|ref|YP_004445761.1| Arginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331787|gb|AEE48888.1| Arginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 614

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 239/599 (39%), Gaps = 114/599 (19%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ + A +         F   KGF+NL +  +Y +  L  I     ++G      G
Sbjct: 56  PEAIAQELGAYLVEQVQSIKAFNVIKGFLNLVVDDAYWQAFLQDIY-HNPQFGTQ-APNG 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+ S N   P+H+GH R  ++G +++ +   +GY+V R   IND G  I    L+
Sbjct: 114 RKVMVEYCSPNTNKPLHLGHIRNILLGWSVSKIYEAAGYDVVRVQIINDRGIAICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKD 235
            + +Y +      S +   ++ G Y     K+  ++Y     S E +   EEK      +
Sbjct: 174 -WQKYGEGATPESSGIKSDHFVGDYYVLFEKKFQEEYKAWQQSPEAVALFEEK---KKAE 229

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDD----FHRGDPSPIRDIIDNLARQGYVYEGIL 291
            S +   K  +D  +  N+   +     +    +   DP+ I ++   +   G+VY G  
Sbjct: 230 QSAEEYFKTFKD--QYFNLYSTLGKEARELLLAWEANDPATI-ELWKKM--NGWVYAGF- 283

Query: 292 PPPKSKTTQKCDMDRKQLLFRST--MVG-DDVDRPL------------------------ 324
                 T  K  +   +L + S   ++G + VD+ L                        
Sbjct: 284 ----DSTFDKLGVRFDKLYYESNTYLLGRETVDQGLNSGVFYRLEDGSVWIDLEDAKLDK 339

Query: 325 ---LKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
              L+ DG+  Y   D+   + +Y + G + MIYV+  + + + + L  +   + E  A 
Sbjct: 340 KLVLRKDGTSVYITQDIGTAQVRYRDFGAEKMIYVVADEQNYHFQVLFEIMKRLGEPYAG 399

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE---LLDF 437
               L  L     D    KM  R G  +    ++DEV +++      W  + E   L D 
Sbjct: 400 ---GLYHLSYGMVDLPSGKMKSREGTVVDADDLIDEVVNEA------WENSKERGTLADL 450

Query: 438 D-----------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFR 466
                             F  VK   K+  +F              YVQ A  RC S+  
Sbjct: 451 SPEAQQEVIRKIGVAALKFFIVKVHPKKRMIFDPKESVDLQGQTGPYVQNAIVRCNSMLN 510

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A +  PDL       +        +T+E  +I  L ++P +I+ A    +P  +A Y Y
Sbjct: 511 KAGN--PDL-------SAASDYHTLETAEKDIIAQLYQFPEIIKQAAEGYDPSMVAMYSY 561

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LA  FH  W         R +QA        R+QL  AV +++  GL+++G+E+P  M
Sbjct: 562 ELAKAFHRFWHD------YRILQAETEAAKAFRIQLSMAVRNVLRMGLDLLGIETPERM 614


>gi|237745037|ref|ZP_04575518.1| arginyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432266|gb|EEO42478.1| arginyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 569

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 137/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEKIKNNFPYGNVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            SI   G +Y  + + +  KV ++F S N    MH+GH R  ++G+++  +  + GY+V 
Sbjct: 96  DSIKKIGEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESVCRIYRYLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      + 
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMA 266

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D++  L  +G   +        +  +    D K  LF            + K DG+Y Y 
Sbjct: 267 DVVKELIDKGLAVD-------DEGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDILGWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+ D+     I 
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVAEQNIDLNEDI----EIK 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L 
Sbjct: 481 TDNKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533

Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 -----NQDIETLKSRALLIKKTGKVLKDGLRLLGIPVLNKM 569


>gi|186684132|ref|YP_001867328.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689424|sp|B2J6I0|SYR_NOSP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|186466584|gb|ACC82385.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 584

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 140/581 (24%), Positives = 237/581 (40%), Gaps = 74/581 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG  P  IA  IV ++ +    +   IAG GFINL L  +YL   L
Sbjct: 40  GDYQANVALSLSKKLGKQPRAIAGAIVEKLDVSEICEPPEIAGPGFINLKLKTAYLEAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + I       G        + N++F S N    MHVGH R  ++GD++A ++ F G++V 
Sbjct: 100 NDIQADP-RLGVPAAKTPKRENVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHDVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   ++ L  G     Y K   +   D    E  
Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPDALTTANA-LDIGDLVSFYRKAKQRFDTDTAFQETA 217

Query: 223 NFPEEKWLPIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP-IRDII 277
                +     +D  ++ + + +  R + + +    DI ++E    RG+   +P +  I+
Sbjct: 218 RQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTE----RGESFYNPLLSGIV 273

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           ++L + G + E            KC      L   +   G+ +   + KSDG Y Y   D
Sbjct: 274 EDLEKSGLLVE--------NQGAKCVF----LEGFTNREGEPLPLIVQKSDGGYNYATTD 321

Query: 338 LAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDG 395
           LA  + + ++     +IYV  +    +  +   VA         + ++     + L  DG
Sbjct: 322 LASLRYRIQQDQAKRIIYVTDAGQGNHFAQFFQVARKAGWIPDDVELVHVPFGLVLGEDG 381

Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRF 424
              K   R+GD + LR ++DE                               VG  +V++
Sbjct: 382 K--KFKTRSGDTVRLRDLLDEAVSHAHADLKTRLQKEERQETEEFINEVARVVGISAVKY 439

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L +  +    F + K+ +  K N   Y+ Y YAR   I R+      D++F     N 
Sbjct: 440 ADLSQNRTSNYIFSYDKMLD-LKGNTAPYMLYVYARIHGISRKG-----DINFKELGNNA 493

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +  + E   +EL L  +L +   VI +      P +L  YL++L+  F+  +       R
Sbjct: 494 VLLQHE---TELALAKYLLQLDEVISSVEQDLLPNRLCEYLFELSQKFNQFYD------R 544

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +QA   + T  RL L    A  +  GL+++G++    M
Sbjct: 545 CSILQAEEPQRT-SRLVLCDLTARTLKLGLSLLGIQVLERM 584


>gi|15921521|ref|NP_377190.1| arginyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|23822200|sp|Q971X1|SYR_SULTO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15622307|dbj|BAB66299.1| 623aa long hypothetical arginyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 623

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 229/557 (41%), Gaps = 112/557 (20%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +YG   I K  +V +E  SANP  P+HVGH R A++GD +A ++   G+EV   +Y+NDA
Sbjct: 97  DYGIEKIQKPQRVVVEHTSANPIHPLHVGHLRNAILGDVIARMLKARGHEVNTRFYVNDA 156

Query: 171 GAQINTLAL---------------------------SVFWRYQQALYNNDSDLPEGYYPG 203
           G Q+  L L                           ++     Q      S   E Y   
Sbjct: 157 GRQVAILTLGYLLLGEPNPPRDEKIDQWIGVIYAITNILIEINQLKKELSSSNEEEYRQK 216

Query: 204 VYL---------KHVGK--ELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKII----- 245
           +           KH  K  E+ DK + E+      EEK   I+K+Y   +  KI+     
Sbjct: 217 ISKLDELISLAGKHREKYPEIFDKLADEISKIENIEEKIQNIIKNYERHSDEKIVNVIRK 276

Query: 246 ---------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                    +D LK L+I  D F  E D            +D + +     + I    K 
Sbjct: 277 LVNWTLEGFKDSLKILDIHFDNFDYESDLLWSKR------VDEIVKLALSSKNI-KEHKG 329

Query: 297 KTTQKCDMD---RKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFD 350
                 D+D   RK+L   +  +G  ++ P   L++SDG+  Y   D+AY   K+E  + 
Sbjct: 330 TIALSLDLDPEARKRL---NIPLG--LELPPLVLVRSDGTTLYTTRDIAYSLYKFEVFYA 384

Query: 351 N-MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           N +I V+    S    +L A    +  K    N++      +   GM  +MS R G +I+
Sbjct: 385 NKVINVIAEQQSVPQMQLRASLYLLGFKDIAENLIHYSYGMVNLQGM--RMSGRLGRYIS 442

Query: 410 LRHVVDEV-----------GSD----------SVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           L  +++EV           G D          ++R+ +L    ++ + F+   + +   +
Sbjct: 443 LDEIINEVKEVAENKIKEKGGDLNNLLDIVNSAIRYAILSVSANKPVSFNIKNIVD-FDQ 501

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QY YAR  +I  + ++       D          S+    + +L++ +A++P V
Sbjct: 502 NSGPYLQYTYARAYNILAKNEEKLDINKVDF---------SDIVDDKRRLLISIAKFPEV 552

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
              A     P  L  ++  +A +F+  W +       R +Q  N    M+RL +V  V  
Sbjct: 553 ATKAVDELRPEDLLGFMRSIADIFN-RWYNFE-----RVLQEPNEGKRMLRLFIVKGVER 606

Query: 569 IINSGLNIIGVESPNEM 585
           I+ +GL+I+G++    M
Sbjct: 607 ILYNGLSIVGIKPLKRM 623


>gi|238783286|ref|ZP_04627311.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715879|gb|EEQ07866.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 576

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 136/594 (22%), Positives = 238/594 (40%), Gaps = 105/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ +G+ P  +AE ++  + ++     V IAG GFIN++L   +     
Sbjct: 37  GDYQANGVMAVAKKMGMQPRQLAEKVIELLDLEGIASKVEIAGPGFINIFLDRQW----- 91

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              V S +E+       G        + +++ + N    MHVGH R  ++GD     + F
Sbjct: 92  ---VASKVEFALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 148

Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198
            G+ V R  ++ D G Q   L                   L +F  YQQA    D D   
Sbjct: 149 LGHHVIRANHVGDWGTQFGMLIAYLEKMQNESASDMDLSDLELF--YQQAKKTYDEDEEF 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                 Y+  V  +  D+Y  ++       W  +V D ++ A  +I  D L  + +  D 
Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQIAYDRLN-VTLTTDD 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P     I+ +L  +G   E         T    D  + +        G+
Sbjct: 255 VMGESLYNAMLPG----IVADLKAKGLAVE-----SDGATVVYLDEYKNK-------DGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE  G D ++Y + +    +       V++   V
Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411
             +V  +     ++L +  + +  R G  +K+S       +RAG  I           L+
Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELK 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VV+ VG  +V++  L +  +    FD+  +      N   Y+QYAY R  S+F++A   
Sbjct: 419 QVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVD 477

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L   L    VI ++ E       L   L ++  VI        P+ +  YLYD+A +
Sbjct: 478 ENSLTLPL----VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDVAGL 528

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H       + + A + ++   RL+L    A  +  GL+ +G+ +   M
Sbjct: 529 FSSFYEH------CQILNAASEEIRQSRLKLAMLTAKTLKQGLDTLGIRTVERM 576


>gi|313890374|ref|ZP_07824005.1| arginine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121217|gb|EFR44325.1| arginine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 562

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 247/588 (42%), Gaps = 86/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++      L++ L   P  IA  +    KIDP      +A   +IN +
Sbjct: 26  LLETPKNSDMGDIAF-PTFSLAKVLRKAPQMIAAELAE--KIDPSQFEKVMAVGPYINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + + K +L +++     YG+  IG G  + ++  S N   P  VGH R  V+ D + 
Sbjct: 83  LDKTTISKNVLHAVIEEKANYGQQHIGDGQNITLDMSSPNIAKPFSVGHLRSTVIADAIG 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + +  GY   R  ++ D G Q   L ++   W  Q A+  N  D          LK   
Sbjct: 143 HIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLWGDQAAIEANPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+   +  L+    +W   ++D   +A  + +  RD+ L   N  +D      D+  
Sbjct: 195 RINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYDKLDVTFDYFH 254

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-- 325
           G+ +   D +D   +   + E      +SK  Q  D+++  L             P L  
Sbjct: 255 GE-AFYNDKMDEGIQ---ILEDKHLLKESKGAQIVDLEKYDL------------PPALIK 298

Query: 326 KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           KSDG+  Y   D+A    + +R F+    IYV+G + S + K+L+AV   +    A  N+
Sbjct: 299 KSDGATLYITRDMATAMYR-QRTFNFVKNIYVVGQEQSHHFKQLKAVLKEMGFDWAD-NM 356

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
           +      + ++    K+S R G+ I L   +DE                         VG
Sbjct: 357 IHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAVARALTQIESKNPDLENKEAVAHAVG 414

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +V+F  L        DFD    V  + +  P  YVQY YAR +SI R+A +  PD++ 
Sbjct: 415 VGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYTYARIQSILRKA-NFTPDVNK 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D          S  D    ++I  L  +   I+ A    +P  +A +   LA  F+ +++
Sbjct: 472 DY---------SLKDDESWEIIKLLQSFASNIQRAADKYDPSIIAKFAIQLAQAFNKYYA 522

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R        +++ R     RL L ++ A ++   L ++GV++P +M
Sbjct: 523 HTR-----ILDESDERD---SRLALCYSTAVVLKESLRLLGVQAPEKM 562


>gi|73953492|ref|XP_866928.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 3 [Canis
           familiaris]
          Length = 662

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 137/581 (23%), Positives = 258/581 (44%), Gaps = 67/581 (11%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  V+ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+
Sbjct: 171 VSQQLTNLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K + + +   + K   I+K + +  +  + R +   +    DI + E    RG+ S  +D
Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGE-SFYQD 340

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            ++++ ++   +E      K     + D D ++++F   + G  V   ++KSDG YTY  
Sbjct: 341 RMNDVVKE---FED-----KEPRFVQVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDT 388

Query: 336 ADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-------------------S 375
           +DLA  K + +E   D +IYV+ +  S + + +   A  +                    
Sbjct: 389 SDLAALKQRLFEEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLG 448

Query: 376 EKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSVRFM 425
           E K +      E VR   L  +G+   M K   +  D +     L+     V    +++ 
Sbjct: 449 EDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYA 508

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L         F F K+ +  + N   Y+ YA+ R RSI R A     +++ ++  +   
Sbjct: 509 DLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQ 562

Query: 486 PQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
             +   D   E +L   +  +P +++        + L  Y+Y+LA+ F   +       +
Sbjct: 563 ETKIVLDHEKEWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEK 622

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       K+ M R+ L  AVA+I+    +I+G++    M
Sbjct: 623 DRQT-GQVLKVNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 662


>gi|146418269|ref|XP_001485100.1| hypothetical protein PGUG_02829 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 632

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 104/549 (18%)

Query: 88  FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  + S S L   ++   +    EYG   +GKG KV IEF S N   P H GH R  ++
Sbjct: 137 FLQFFFSTSVLFNVVIKDSLTRTTEYGALPLGKGKKVVIEFSSPNIAKPFHAGHLRSTII 196

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  L+ L    G+EV++  Y+ D G Q   LA+  F RY  ++ L  N    P  +   V
Sbjct: 197 GGFLSKLYEKEGWEVSKLNYLGDWGKQFGLLAIG-FQRYGSEEELVKN----PINHLFEV 251

Query: 205 YLK-----------HVG--KELADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDD 248
           Y++            VG   + A  Y   + +  EE    W    +DYS++  +    D 
Sbjct: 252 YVRINQDVAAEGPDAVGGVNDQAKHYFKRMEDGDEEALVLWRRF-RDYSIEKYI----DT 306

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
              LNI +D +  E    +     +++++     +G ++E        K  +  D+ +  
Sbjct: 307 YARLNIVYDKYAGESLVSK---QKMKEVVQIFNEKGLIHE-------DKGAKLIDLTKFN 356

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
                T+V         KSDG+  Y   D+     +YE   FD MIYV+ S    H+   
Sbjct: 357 KKLGKTLVE--------KSDGTSIYLTRDVGEAIARYETYKFDKMIYVIASQQDLHTAQF 408

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     +  RLE V       +S +K  + V L  ++   ++ M   M K    + 
Sbjct: 409 FEILKQMGFEWANRLEHVNFGMVLGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEDKYA 467

Query: 409 TL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            +     V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R  S+
Sbjct: 468 QIEDPEKVADLVGISAVMIQDMQSKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLSSV 525

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSEL------QLIVHLAEYPRVIENATIAQ 516
            R++                IP E  +E D S L       LI  LA+YP ++  A    
Sbjct: 526 QRKSG---------------IPNEKLTEADLSLLTEPCAGNLIRILAQYPDILRRAMTTH 570

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  YL++L  V    +        + +V     KL   RL L  +   ++ +G+ +
Sbjct: 571 EPSTIVTYLFNLTHVVSQCYD-------ILWVAGQEEKLATARLALYASAKQVLYNGMTL 623

Query: 577 IGVESPNEM 585
           +G+     M
Sbjct: 624 LGLTPVERM 632


>gi|227431637|ref|ZP_03913673.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352629|gb|EEJ42819.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 563

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 247/600 (41%), Gaps = 111/600 (18%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IVA   ID +     +A   ++N +L
Sbjct: 27  LEAPKSSDLGDVAF-PTFTLAKTLHKAPQLIAADIVA--AIDQEGFEKVVATGPYVNFFL 83

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              +   ++L ++      YG N+ G+G KV I+  S N   PM +GH R  V+G+ LA+
Sbjct: 84  DKVATSNQVLKTVFDLEGAYGDNVDGQGAKVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           + A +GY   +  ++ D G Q   L  +   W  ++ + ++       YY  V      K
Sbjct: 144 ITAKNGYAPVKINHLGDWGTQFGKLIYAYKAWGSEEEVKSDPIATLLKYY--VEFHEKAK 201

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA----------MMKIIRDDLKALNIQHDIFIS 261
           E      ++LLN     W   ++D   +A           +K   +    L+I  D F  
Sbjct: 202 E------NDLLNDEGRAWFKKLEDGDEEAHRLWQWFRAESLKEFSEIYDRLDITFDSFNG 255

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++      +  ++D L  +  + E       S+  Q  D+          M+     
Sbjct: 256 EAFYN----DKMDKVVDLLEEKNLLVE-------SQGAQIVDLSHINPNLTPAMIK---- 300

Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
               +SDG+  Y   DLA   Y K  Y+  F   +YV+G +   +  +++AV + +    
Sbjct: 301 ----RSDGATLYMTRDLAAALYRKETYD--FAKSLYVVGGEQREHFVQMKAVLSLMGFEW 354

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------- 415
           S+    I   L        +G   KMS R G+ + L+ V+D                   
Sbjct: 355 SDDTEHIAFGLITF-----NGK--KMSTRKGEVVLLKDVLDDAHELALKQIQEKNPALGD 407

Query: 416 ------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQA 468
                 EVG+ +V F  L    +   DF+  + V+ +    P  YVQY  AR +SI R+ 
Sbjct: 408 KYTVAEEVGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKT 465

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                  D +L            D +   +I  L  +P+ ++ A   +E   +A Y  +L
Sbjct: 466 SVQLTSDDLNL-----------TDPATWDIITTLNNFPKTVQRAWQQREASIIAKYALNL 514

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  F+ ++++ +   E+ +L             RL LV +V+ ++  GL ++GV++P EM
Sbjct: 515 SRAFNKYYANSKILTEDAQLN-----------ARLVLVKSVSIVLTEGLRLLGVKAPEEM 563


>gi|294659494|ref|XP_461877.2| DEHA2G07590p [Debaryomyces hansenii CBS767]
 gi|199434005|emb|CAG90340.2| DEHA2G07590p [Debaryomyces hansenii]
          Length = 628

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 130/543 (23%), Positives = 230/543 (42%), Gaps = 92/543 (16%)

Query: 88  FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  + S   L   ++   +V   +YG   IG   KV +EF S N   P H GH R  ++
Sbjct: 133 FLQFFFSKELLFNLVIKDTLVRTDKYGSLPIGLNKKVIVEFSSPNIAKPFHAGHLRSTII 192

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  L++L   +G++VTR  Y+ D G Q   LA+  F +Y  +++L  +    P  +   V
Sbjct: 193 GGFLSNLYEKAGWDVTRINYLGDWGKQFGLLAVG-FEKYGSEESLAKD----PINHLFEV 247

Query: 205 YLKHVGKELADK--------------YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           Y+K V K++ ++              Y   + N  EE  L I K +   ++ K I D   
Sbjct: 248 YVK-VNKDVTEEGEDATDGTNDKARAYFKRMENGDEEA-LKIWKRFRELSIHKYI-DTYA 304

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            LNI++D++  E    +     ++  +D   ++G ++E                DR   L
Sbjct: 305 RLNIKYDLYSGESQVSK---ESMKAAMDTFDKKGLLHE----------------DRGAKL 345

Query: 311 FRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV---- 364
              T     + + L+ KSDG+  Y   D+     +Y    FD MIYV+ S    +V    
Sbjct: 346 IDLTKFNKKLGKCLVEKSDGTSLYLTRDVGEAVKRYNTYKFDKMIYVIASQQDLHVAQFF 405

Query: 365 -----------KRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                      K LE V       +S +K  + V L  ++   ++ M   M K    +  
Sbjct: 406 EILKQMGFEWAKSLENVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEAKYAQ 464

Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465
           + +   + D VG  +V    +  K     +F + ++   +    P  Y+QYA++R RSI 
Sbjct: 465 IENPDLIADLVGISAVMIQDMQSKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLRSIQ 522

Query: 466 RQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           R++     +L   ++DL            +     LI  LA+YP  I+ A    EP  + 
Sbjct: 523 RKSDISEEELLHANYDLLT----------EPCAANLIRTLAQYPDTIQKALKTHEPSTIV 572

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++L  +    +        + +V    ++L + RL L  +   ++++G+ ++G+   
Sbjct: 573 TYLFNLTHIASQCYD-------ILWVAGQEKELAVARLALYASARQVLHNGMTLLGLTPV 625

Query: 583 NEM 585
           + M
Sbjct: 626 DRM 628


>gi|190346605|gb|EDK38731.2| hypothetical protein PGUG_02829 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 632

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 104/549 (18%)

Query: 88  FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  + S S L   ++   +    EYG   +GKG KV IEF S N   P H GH R  ++
Sbjct: 137 FLQFFFSTSVLFNVVIKDSLTRTTEYGALPLGKGKKVVIEFSSPNIAKPFHAGHLRSTII 196

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  L+ L    G+EV++  Y+ D G Q   LA+  F RY  ++ L  N    P  +   V
Sbjct: 197 GGFLSKLYEKEGWEVSKLNYLGDWGKQFGLLAIG-FQRYGSEEELVKN----PINHLFEV 251

Query: 205 YLK-----------HVG--KELADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDD 248
           Y++            VG   + A  Y   + +  EE    W    +DYS++  +    D 
Sbjct: 252 YVRINQDVAAEGPDAVGGVNDQAKHYFKRMEDGDEEALVLWRRF-RDYSIEKYI----DT 306

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
              LNI +D +  E    +     +++++     +G ++E        K  +  D+ +  
Sbjct: 307 YARLNIVYDKYAGESLVSK---QKMKEVVQIFNEKGLIHE-------DKGAKLIDLTKFN 356

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362
                T+V         KSDG+  Y   D+     +YE   FD MIYV+ S    H+   
Sbjct: 357 KKLGKTLVE--------KSDGTSIYLTRDVGEAIARYETYKFDKMIYVIASQQDLHTAQF 408

Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                     +  RLE V       +S +K  + V L  ++   ++ M   M K    + 
Sbjct: 409 FEILKQMGFEWANRLEHVNFGMVLGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEDKYA 467

Query: 409 TL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
            +     V D VG  +V    +  K     +F + ++   +    P  Y+QYA++R  S+
Sbjct: 468 QIEDPEKVADLVGISAVMIQDMQSKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLSSV 525

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSEL------QLIVHLAEYPRVIENATIAQ 516
            R++                IP E  +E D S L       LI  LA+YP ++  A    
Sbjct: 526 QRKSG---------------IPNEKLTEADLSLLTEPCAGNLIRILAQYPDILRRAMTTH 570

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  YL++L  V    +        + +V     KL   RL L  +   ++ +G+ +
Sbjct: 571 EPSTIVTYLFNLTHVVSQCYD-------ILWVAGQEEKLATARLALYASAKQVLYNGMTL 623

Query: 577 IGVESPNEM 585
           +G+     M
Sbjct: 624 LGLTPVERM 632


>gi|158337656|ref|YP_001518831.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158307897|gb|ABW29514.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 584

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 243/594 (40%), Gaps = 100/594 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N ++ L++PLG  P  IA+ I+  +++D   +   IAG GFINL L P++L + L
Sbjct: 40  GDYQSNVSLALAKPLGQSPRGIADQILQHLEVDDLCEPPTIAGPGFINLTLKPTFLAEQL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             +      GIE     I    +V ++F S N    MHVGH R  ++GD +A ++ F G 
Sbjct: 100 QQMQADPRLGIEP----IADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGN 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD 215
           +V R  ++ D G Q   L   +   +  AL  +D+    DL   Y          ++   
Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQV 215

Query: 216 KYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           +  + ++   +      + W  ++ D S +   KI RD         DI ++E    RG+
Sbjct: 216 QSRNAVVKLQQGDSEATQAW-QLLCDQSRREFEKIYRD--------LDIELTE----RGE 262

Query: 270 P--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLL 325
              +P + D++ +L + G +          +T Q       Q +F         D +PL+
Sbjct: 263 SFYNPFLADVLTDLDKAGLL----------ETDQGA-----QCVFLEGFTNKQGDPQPLI 307

Query: 326 --KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
             KSDG + Y   DLA  + +        +IY+  +  + +  ++  VA         I 
Sbjct: 308 VQKSDGGFNYATTDLAALRHRITAESAQRLIYITDAGQANHFAQVFQVARRAQWMPETIQ 367

Query: 383 VLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEV---GSDSVRFMMLWRKNSELLDF- 437
           V+      +   DG   K+  R+G  I LR ++DE        +   +     +E  DF 
Sbjct: 368 VVHMPFGLVQGEDGK--KLKTRSGKTIRLRDLLDEAVTRAQTDIETRLAEEDRTESPDFI 425

Query: 438 ------------DFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDI 471
                        +  + +    N VF              Y+ YAY R + I R+ K  
Sbjct: 426 ANAAQVIGLGAVKYADLSQNRTSNYVFSYDKMLALQGNTAPYMLYAYVRVQGISRKGKID 485

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           F  LD D+   ++I  E     SEL L  HL +   ++        P +L  YL++L+  
Sbjct: 486 FSQLD-DV---SLIIAEP----SELALAKHLLQMQDILSEVAADLLPNRLCQYLFELSQK 537

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  +    + P L   +         RL L    A  +  GL+++G+E    M
Sbjct: 538 FNQFYD---QCPVLNAEEPARTS----RLVLSDLTARTLKLGLSLLGIEVLERM 584


>gi|300362212|ref|ZP_07058389.1| arginine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354831|gb|EFJ70702.1| arginine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 564

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N 
Sbjct: 30  MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIS-DDNFTSIQAVGP-YVNF 86

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +G+G  V I+  S N   PM +GH R  V+G+++
Sbjct: 87  AIDHAKLVNATLNDVLTEKDHFGDQQLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 146 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 199

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 200 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 252

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 253 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 291

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + SG+ K+L+ V
Sbjct: 292 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 347

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410
              +    A  N+       + + G   K+S R G+ + L                    
Sbjct: 348 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 404

Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464
                  V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI
Sbjct: 405 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 462

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     ++  D    N        D     +   LA++P ++  A+   EP  +A Y
Sbjct: 463 LRKAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVAKASEKFEPSIIAKY 511

Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +
Sbjct: 512 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 560

Query: 582 PNEM 585
           P EM
Sbjct: 561 PKEM 564


>gi|156841670|ref|XP_001644207.1| hypothetical protein Kpol_1059p40 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114844|gb|EDO16349.1| hypothetical protein Kpol_1059p40 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 649

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 226/537 (42%), Gaps = 91/537 (16%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG 113
           R  G +P  +AE   ++      ++ V   G  FI  +  P +L R ++  I+    EYG
Sbjct: 119 RIKGANPKDLAEEWSSKFPCGDFLEKVEANGP-FIQFFFKPDFLFRVVVPDILTRKEEYG 177

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
              + +  +V +EF S N   P H GH R  ++G  +A+L    G+EV R  Y+ D G Q
Sbjct: 178 SCKLVENKRVILEFSSPNIAKPFHAGHLRSTIIGGFIANLYEKLGWEVIRMNYLGDWGKQ 237

Query: 174 INTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS------------ 219
              LA+  F RY  + AL  +    P  +   VY+K + K++ ++  S            
Sbjct: 238 FGLLAVG-FERYGSEDALAKD----PIHHLFEVYVK-INKDIEEEGDSLPLEESTNGKAR 291

Query: 220 ---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              + +   +E+ L I K +   ++ K I D    LNI++D++  E    +     +   
Sbjct: 292 EYFKRMEDGDEEALKIWKRFRELSIEKYI-DTYARLNIKYDVYSGESQVSK---DSMNKA 347

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFA 335
           I+    +G  +E                D+  +L   T     + + ++ KSDG+  Y  
Sbjct: 348 IEIFNEKGLTHE----------------DKGAVLIDLTKFNKKLGKTIVQKSDGTTLYLT 391

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSD---HSG------------YVKRLE----AVAAAVS 375
            D+     +YE+  FD MIYV+ S    H+             +  RL+     +   +S
Sbjct: 392 RDVGAAMDRYEKYKFDKMIYVIASQQDLHTAQFFEILKQMGFDWADRLQHINFGMVQGMS 451

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNS 432
            +K  + V L  ++   ++ M   M K    +  +     V D VG  +V    +  K  
Sbjct: 452 TRKGTV-VFLDNILEETKEKMHDVMKKNEAKYAQIEKPEEVADLVGISAVMIQDMQSKRI 510

Query: 433 ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP----DLDFDLFPRNVIPQ 487
              +F + ++   +    P  Y+QYA++R RS+ R A +I P    D DF L        
Sbjct: 511 NNYEFKWERMLSFEGDTGP--YLQYAHSRLRSVERNASEITPDKLLDADFSLLE------ 562

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSHGR 540
               + + + LI  LA+YP V+ N+    EP  +  YL+ L    +S +   W  G+
Sbjct: 563 ----EPAAILLIRLLAQYPDVLRNSIKTHEPATVVTYLFKLTHQVSSCYDVLWVAGQ 615


>gi|325578263|ref|ZP_08148398.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159999|gb|EGC72128.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 577

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 135/599 (22%), Positives = 236/599 (39%), Gaps = 114/599 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++    +    +   IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDHADLSDVAEKTEIAGPGFINIFLNPTWLANNV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +     G +   K T V I++ S N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 97  SA-ALKDQNLGVSANEKQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +V D ++Q   +   D L     + D+ + E  
Sbjct: 215 ----VKLQGGDEYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTEKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P+    I+++L +QG   E                D   L+       +    P+
Sbjct: 261 YNPMLPA----IVEDLKKQGLAVE----------------DEGALVVYLDEFKNKEGEPM 300

Query: 325 ----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
                K DG + Y   D+A  K +YE    D  +    +  S ++++    A  ++ K  
Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAG 356

Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
            + +    E     + L +DG P K   R G  + L  ++DE                  
Sbjct: 357 YVPDSFSLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSD 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 EEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           A         D+ P  +   + +  D  E  L + L ++   ++       P+ L  YLY
Sbjct: 474 A---------DVNPTALAEAKIQLSDEKERALAIKLLQFEEAVQTVGKEGTPHVLCAYLY 524

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LA +F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 525 ELAGIFSSFYEH------CPILNAEDENVKLSRLKLASLTEKTLKQGLALLGIKTIEKM 577


>gi|323499566|ref|ZP_08104536.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315439|gb|EGA68480.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 577

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 133/604 (22%), Positives = 238/604 (39%), Gaps = 124/604 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAK-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +   ++    G     + T V  ++ + N    MHVGH R  ++GD +   + F G++V 
Sbjct: 96  ADAALADTRLGVAEQAQQTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           R  +I D G Q   L                    L  F+R  + LY+ D +        
Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLYDEDEEFAVKARNY 214

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V    V  +  D+Y +E+       W  +V    +Q                     ++ 
Sbjct: 215 V----VKLQGGDEYCAEM-------WKKLVDITMIQ---------------------NQR 242

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFR---STMVG 317
           ++ R + S  RD +   +    +Y  +LPP  +   +K    + D  Q++F        G
Sbjct: 243 NYDRLNVSLTRDDVMGES----MYNDMLPPIVADLKEKGIAQEDDGAQVVFLDEYKNKDG 298

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369
           D +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   
Sbjct: 299 DPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGY 358

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           V   V+ +     ++L       +DG P K   RAG  + L  ++DE    +++  ++  
Sbjct: 359 VPEEVTLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAIK--LIES 408

Query: 430 KNSELLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARC 461
           KN  L   +  K+               K ++ +             N   Y+QYAY R 
Sbjct: 409 KNPSLETEEKTKIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRV 468

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SIF +A      +  D    ++   E +    E  LI  L ++   + +     +P+ +
Sbjct: 469 SSIFAKA-----GISVDQLAGDIKVTEEK----EKALIAKLLQFEEAVLSVAREGQPHIM 519

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL++LA  F   +           + + +  +   RL+L    A  I  GL+++G+E+
Sbjct: 520 CSYLFELAGQFSSFYEA------CPILNSEDESVKQSRLKLAALTAKTIKQGLSLLGIET 573

Query: 582 PNEM 585
              M
Sbjct: 574 LERM 577


>gi|319410738|emb|CBY91120.1| arginyl-tRNA synthetase (arginine-tRNA ligase; ArgRS) [Neisseria
           meningitidis WUE 2594]
          Length = 572

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 124/586 (21%), Positives = 240/586 (40%), Gaps = 80/586 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +         + 
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVG 362

Query: 383 VLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
                    + +DG P K   R+GD + L  ++ E                         
Sbjct: 363 AAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEATKIG 420

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A      
Sbjct: 421 KTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG----- 474

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F  
Sbjct: 475 -EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSR 528

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 529 FY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|298491056|ref|YP_003721233.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232974|gb|ADI64110.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 585

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 235/586 (40%), Gaps = 83/586 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG+    IA  IV ++ +        IAG GFINL L  SYL   L
Sbjct: 40  GDFQANVALSLSKKLGMQARVIASAIVEKLDVSDICKPPEIAGPGFINLRLQTSYLESQL 99

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           ++I      G+   +N      K  ++F S N    MHVGH R  ++GD +A ++ F G+
Sbjct: 100 NAIKTDSRLGVPKTKN----SQKEIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFHGH 155

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           EV R  ++ D G Q   L   +   Y +AL   ++ L  G     Y +   +  AD+   
Sbjct: 156 EVLRLNHVGDWGTQFGMLITYLREVYPEALTTANA-LDIGDLVTFYRQAKQRFDADE--- 211

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID- 278
               F E     +V+      +   + D L A  +     + E    R +   I D+++ 
Sbjct: 212 ---TFQETARQEVVR------LQAGVEDTLHAWKL-----LCEQ--SRREFQVIYDLLNV 255

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-----PLL--KSDGSY 331
           NL  +G  +     P   +  +K  +  +    +   +    +R     PL+  KSDG Y
Sbjct: 256 NLIERGESFYNPFLPAVVEDLEKTGLLEENQGAKCVFLDGFTNREGEPLPLIIQKSDGGY 315

Query: 332 TYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   DLA  + + E+     +IYV  +  + +  +   +A   +     + ++      
Sbjct: 316 NYATTDLACLRYRIEKDQAKRIIYVTDAGQANHFTQFMQLAKKANWIPDDVELVHVPFGL 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGS 419
           +  D    K   R+GD + LR ++DE                               VG 
Sbjct: 376 VLGDNRK-KFKTRSGDTVRLRDLLDEAVSRTRADLEARLIEEGREETEEFIKNVAEVVGI 434

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    F + K+    K N   Y+ YAY R + I R+    F +L  D 
Sbjct: 435 SAVKYADLSQNRTSNYVFSYDKML-ALKGNTAPYMLYAYVRTQGISREGNIDFENLGTD- 492

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               ++ +E     +EL L   L +   VI        P +L  YLY+L+  F+  + + 
Sbjct: 493 --TKILLKED----AELTLAKDLLQLDEVISEVEQDLLPNRLCDYLYNLSDKFNKFYENC 546

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              P L+    +       RL L    A  +  GL+++G++    M
Sbjct: 547 ---PVLK----SEEPTRTSRLMLCDLTAKTLKLGLDLLGIKVLERM 585


>gi|212711950|ref|ZP_03320078.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM
           30120]
 gi|212685472|gb|EEB45000.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM
           30120]
          Length = 576

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 139/604 (23%), Positives = 243/604 (40%), Gaps = 125/604 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE IV+++ ++     V IAG GFIN+++ P+++    
Sbjct: 37  GDYQANGVMGAAKKMGMPPRQLAEQIVSQLDLEGIASKVEIAGPGFINIFIDPTWIAAHA 96

Query: 103 SSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + S      + +G    K   + I++ + N    MHVGH R  ++GD  A    F G
Sbjct: 97  EKALTS------DRLGLAPVKAETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIG 150

Query: 159 YEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDL---P 197
           ++V R  ++ D G Q   L                   L  F+R  +  Y+ D D     
Sbjct: 151 HKVIRANHVGDWGTQFGMLIAYLEKVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRA 210

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            GY        V  +  D+Y  ++       W  +V D ++Q   +  R        + +
Sbjct: 211 RGYV-------VKLQSGDEYCRKM-------WRKLV-DITMQQNQETYR--------RLN 247

Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + ++EDD   G+    S +  I+ +L  +G   E       S+      +D     F++ 
Sbjct: 248 VTLTEDDV-MGESLYNSMLPGIVADLKAKGLAVE-------SEGATVVFLDE----FKNK 295

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--- 370
             G+ +   + K DG + Y   D+A  K +YE    D  +Y + S    ++ +   +   
Sbjct: 296 E-GEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDSRQHQHLMQAWTIVRK 354

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
           A  + E  A  + +   +  L +DG P K   R+G  + L  ++DE              
Sbjct: 355 AGYIPESMALEHHMFGMM--LGKDGKPFK--TRSGGTVRLSDLLDEAVERAQTLIREKNP 410

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S
Sbjct: 411 DMAEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVAS 469

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKL 521
           IF++A     DL   +      P        E+ L   L ++   I   T+A+E  P+ +
Sbjct: 470 IFKKADITESDLTLPIVLE--APH-------EMALATRLMQFEETI--LTVAREGTPHVM 518

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YLYDLA +F   + H         + A+       RL+L       +  GL+ +G+E+
Sbjct: 519 CAYLYDLAGLFSSFYEH------CPILSADTDAQRQSRLKLALLTQKTLKVGLDTLGIET 572

Query: 582 PNEM 585
              M
Sbjct: 573 VERM 576


>gi|301170344|emb|CBW29950.1| arginyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 577

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 236/594 (39%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++   ++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVTRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               GD +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|37679228|ref|NP_933837.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932019|sp|Q7MMM3|SYR_VIBVY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|37197971|dbj|BAC93808.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 577

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 134/603 (22%), Positives = 238/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKQLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            + +     G+  E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EAALADPRLGVASEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214
           G++V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A
Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208

Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261
            K    ++       F  E W  +V    +Q         + + RDD+   ++ +D+   
Sbjct: 209 VKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM--- 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318
                      +  I+ +L  QG   E                D  Q++F        G+
Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 300 PMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  K
Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409

Query: 431 NSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCR 462
           N EL +                +  + +    + VF              Y+QYAY R  
Sbjct: 410 NPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+F +A     DL  ++            D  E  LI  L ++   +++     +P+ + 
Sbjct: 470 SVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           + A +  +   RL+L    A  I  GL+++G+++ 
Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTL 574

Query: 583 NEM 585
             M
Sbjct: 575 ERM 577


>gi|260494813|ref|ZP_05814943.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197975|gb|EEW95492.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 569

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKVIGDNPRKIAEKIKNNFPYGNVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            SI   G +Y  + + +  KV ++F S N    MH+GH R  ++G+++  +  + GY+V 
Sbjct: 96  DSIKKIGEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESVCRIYRYLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      + 
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMA 266

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D++  L  +G   +        +  +    D K  LF            + K DG+Y Y 
Sbjct: 267 DVVKELIDKGLAVD-------DEGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDMLDWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+ ++     I 
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVAEQNIDLNENI----EIK 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L 
Sbjct: 481 TDNKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533

Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 -----NQDIETLKSRALLIRKTGKVLKDGLGLLGIPVLNKM 569


>gi|320157028|ref|YP_004189407.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932340|gb|ADV87204.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 577

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 134/603 (22%), Positives = 239/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKQLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            + +     G+  E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EAALADPRLGVASEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214
           G++V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A
Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208

Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261
            K  + ++       F  E W  +V    +Q         + + RDD+   ++ +D+   
Sbjct: 209 VKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM--- 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318
                      +  I+ +L  QG   E                D  Q++F        G+
Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLDEFKNKDGE 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 300 PMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  K
Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409

Query: 431 NSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCR 462
           N EL +                +  + +    + VF              Y+QYAY R  
Sbjct: 410 NPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+F +A     DL  ++            D  E  LI  L ++   +++     +P+ + 
Sbjct: 470 SVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           + A +  +   RL+L    A  I  GL+++G+++ 
Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTL 574

Query: 583 NEM 585
             M
Sbjct: 575 ERM 577


>gi|27363628|ref|NP_759156.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|31077005|sp|Q8DFR1|SYR_VIBVU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|27359744|gb|AAO08683.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 577

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 134/603 (22%), Positives = 238/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKQLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            + +     G+  E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EAALADPRLGVASEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214
           G++V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A
Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208

Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261
            K    ++       F  E W  +V    +Q         + + RDD+   ++ +D+   
Sbjct: 209 VKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM--- 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318
                      +  I+ +L  QG   E                D  Q++F        G+
Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V
Sbjct: 300 PMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  K
Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409

Query: 431 NSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCR 462
           N EL +                +  + +    + VF              Y+QYAY R  
Sbjct: 410 NPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+F +A     DL  ++            D  E  LI  L ++   +++     +P+ + 
Sbjct: 470 SVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           + A +  +   RL+L    A  I  GL+++G+++ 
Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTL 574

Query: 583 NEM 585
             M
Sbjct: 575 ERM 577


>gi|255526642|ref|ZP_05393548.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186101|ref|ZP_06854506.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509675|gb|EET86009.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296049369|gb|EFG88798.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 563

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 243/582 (41%), Gaps = 111/582 (19%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111
           LS+ L   P  IAE +  +I  D + + +   G  ++N ++    + +  +  ++ +G +
Sbjct: 44  LSKTLRKAPNAIAEELKEKINKD-NFEKIENLGP-YLNFFVDKIDFTKNTIEKVLENGDK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + IG G  + I++ S N   P HVGH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSDIGTGKNITIDYSSPNIAKPFHVGHLCSTSIGNALYRILSFQGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-HVGKE----LADKYSSELLNF 224
            Q   L +S + R+  ++ L       P      +Y+K H   E    L D+      N 
Sbjct: 162 TQFGKL-ISAYKRWCDEEVLEKE----PIKELLRIYVKFHEEAEKDTSLEDEARLHFKNL 216

Query: 225 P-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                 E K     KD S++   K++ D    L I+ D +  E  ++      +  +ID 
Sbjct: 217 EDGCEEETKLWQRFKDLSLKEF-KVVYD---MLGIKFDYYTGESFYN----DKMDAVID- 267

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYT 332
                                  ++D+K LL  S     ++ D+ + P   + K+DG+  
Sbjct: 268 -----------------------EIDKKGLLVESNGAKVVMLDEYNMPPCIIKKADGATI 304

Query: 333 YFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388
           Y   DLA   Y K  Y+  F   IYV+GSD S + K+L      +    A     +   L
Sbjct: 305 YATRDLAAATYRKKTYD--FYKSIYVVGSDQSLHFKQLFTTLKLMGHDWADDCKHVAFGL 362

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVR 423
           VR        K+S R GD I L  +++E                         +G  +V 
Sbjct: 363 VRF----ADKKLSTRKGDVIFLEDLLNESVEKTLEVINEKNPDLENKEEVSKKIGIGAVI 418

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  L     + + FD+ ++     E    YVQY+YAR +SI R+A ++  D+D+      
Sbjct: 419 FTYLKNNREKDIIFDWKEILSFDGETGP-YVQYSYARGKSILRRAGEVEGDIDYSKLNSK 477

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E +L+  L  + + I  A    EPY +  Y+ D+A  F+  ++      
Sbjct: 478 ----------EEFELVKTLEGFQKSILYAIDKLEPYIVTRYIIDVAKGFNKFYNAH---- 523

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A +    + R++LV A   ++ +GLN+IG+E+  +M
Sbjct: 524 --SIMNAEDEATKIARIKLVEATCQVLKNGLNLIGIETVEKM 563


>gi|323493320|ref|ZP_08098443.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312406|gb|EGA65547.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 577

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 133/606 (21%), Positives = 230/606 (37%), Gaps = 128/606 (21%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100
           G    N  M +++ LG +P   A+ ++  + ++       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLEGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +  S +    E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  DAALADSRLGVAAEEQKTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G++V R  +I D G Q   L                    L  F+R  + LY+ D +   
Sbjct: 150 GHKVIRANHIGDWGTQFGMLIANLERVQQDSGEVSMELADLEAFYRESKKLYDEDEEFAV 209

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G E           F  E W  +V    +Q                   
Sbjct: 210 KARNYVVKLQSGDE-----------FCGEMWKKLVDITMIQ------------------- 239

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-- 316
             ++ ++ R + S  RD +   +   ++  GI+   K K     D D  Q++F       
Sbjct: 240 --NQRNYDRLNVSLTRDDVMGESMYNHMLPGIVADLKQKELAVED-DGAQVVFLEEYKNK 296

Query: 317 -GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRL 367
            GD +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++ 
Sbjct: 297 DGDPMGVIIQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKA 356

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             V   VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++
Sbjct: 357 GYVPEEVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEERAAK--LI 406

Query: 428 WRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459
             KN +L           +     K  + SK                  N   Y+QYAY 
Sbjct: 407 ESKNPDLAADEKEKISTTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYT 466

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SIF +A      +  D    N+  +    D  E  LI  L ++   +++     +P+
Sbjct: 467 RVSSIFAKA-----GISMD----NLTGEIKVTDEKEKALIAKLLQFDEAVQSVAREGQPH 517

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YL++LA  F   +           +   +  +   RL+L    A  I  GL+++G+
Sbjct: 518 IMCSYLFELAGQFSSFYE------ACPILNTEDETVKQSRLKLAALTAKTIKQGLSLLGI 571

Query: 580 ESPNEM 585
           ++   M
Sbjct: 572 DTLERM 577


>gi|269960720|ref|ZP_06175092.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834797|gb|EEZ88884.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 577

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 134/601 (22%), Positives = 237/601 (39%), Gaps = 118/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        +   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  EAALTDSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216
           +V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A K
Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210

Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263
             + ++       F  E W  +V    +Q         + + RDD+   ++ +D+     
Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDML---- 266

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                 P     I+ +L  QG   E                D  Q++F        G+ +
Sbjct: 267 ------PK----IVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372
              + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V  
Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  KN 
Sbjct: 362 SVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411

Query: 433 ELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464
           EL +                +  + +    + VF              Y+QYAY R  S+
Sbjct: 412 ELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASV 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A     DL  ++            D  E  LI  L ++   +++     +P+ +  Y
Sbjct: 472 FAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA  F   +           + A +  +   RL+L    A  I  GL+++G+++   
Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576

Query: 585 M 585
           M
Sbjct: 577 M 577


>gi|294785848|ref|ZP_06751136.1| arginine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294487562|gb|EFG34924.1| arginine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 569

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 253/587 (43%), Gaps = 100/587 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKNNFSCGDVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G  Y  + + +  KV I+F S N    MH+GH R  ++G+ +  +  F GY+V 
Sbjct: 96  NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYKKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL      EE+   + K++  ++ +K      K L++  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270

Query: 275 DIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR--PLL--KSDG 329
           +++D  LA                     D D  +++F      D+ D   P +  K DG
Sbjct: 271 ELVDKKLA--------------------VDDDGAKVVF-----FDEKDNLFPCIVQKKDG 305

Query: 330 SYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +Y Y  +D+A  K  K     + MIY+  +    + K+   +   +     + ++    +
Sbjct: 306 AYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-I 364

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421
           +R + DG+   +S R G+ I L  ++DE                           VG  S
Sbjct: 365 IR-FADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSS 420

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+     
Sbjct: 421 VKYADLSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN----- 474

Query: 482 RNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           +N+ I  +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++  
Sbjct: 475 KNIEIKTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC- 530

Query: 541 ENPRLRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
             P L      N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 531 --PIL------NQDIETLKSRTLLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|15677359|ref|NP_274514.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|23822209|sp|Q9JYM8|SYR_NEIMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|7226749|gb|AAF41862.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316986039|gb|EFV64976.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140638|gb|EGC63156.1| arginyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199890|gb|ADY95345.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 572

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 125/586 (21%), Positives = 240/586 (40%), Gaps = 80/586 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  IVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +         + 
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVG 362

Query: 383 VLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
                    + +DG P K   R+GD + L  ++ E                         
Sbjct: 363 AAFIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIG 420

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A      
Sbjct: 421 KTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG----- 474

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F  
Sbjct: 475 -EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSR 528

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 529 FY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|156973665|ref|YP_001444572.1| arginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166200586|sp|A7MT26|SYR_VIBHB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|156525259|gb|ABU70345.1| hypothetical protein VIBHAR_01368 [Vibrio harveyi ATCC BAA-1116]
          Length = 577

 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 134/601 (22%), Positives = 237/601 (39%), Gaps = 118/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        +   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216
           +V R  +I D G Q   L ++   R QQ       +L   EG+Y     L    +E A K
Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210

Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263
             + ++       F  E W  +V    +Q         + + RDD+   ++ +D+     
Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDML---- 266

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                 P     I+ +L  QG   E                D  Q++F        G+ +
Sbjct: 267 ------PK----IVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372
              + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V  
Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  ++  KN 
Sbjct: 362 SVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411

Query: 433 ELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464
           EL +                +  + +    + VF              Y+QYAY R  S+
Sbjct: 412 ELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASV 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A     DL  ++            D  E  LI  L ++   +++     +P+ +  Y
Sbjct: 472 FAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA  F   +           + A +  +   RL+L    A  I  GL+++G+++   
Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576

Query: 585 M 585
           M
Sbjct: 577 M 577


>gi|268319019|ref|YP_003292675.1| hypothetical protein FI9785_528 [Lactobacillus johnsonii FI9785]
 gi|262397394|emb|CAX66408.1| argS [Lactobacillus johnsonii FI9785]
          Length = 558

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 256/602 (42%), Gaps = 115/602 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           ++IERP++   G  +   A  L++    +P  IA+ I  +I  D    S+   G  ++N 
Sbjct: 24  MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKDISEKIS-DDSFTSIQAVGP-YVNF 80

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  + L    L+ ++     +G   +G+G  V I+  S N   PM +GH R  V+G+++
Sbjct: 81  AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207
           A  +   GY   +  Y+ D G Q   L  +  +R    L+ N+ D+ +     +   Y+K
Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193

Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
            H   E   K   E       L N  EE     KW    ++ S+Q   +I     K L +
Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ ++D L  +G + E       S+  Q  ++          
Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELKEKGLLEE-------SRGAQVVNL---------- 285

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             G+D +  L LKSDGS  Y   DLA   Y K +Y+  F   +YV G + +G+ K+L+ V
Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341

Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K  + V L ++++        ++ ++  + 
Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466
              + V  +VG  +V F  L     +  DFD  + V+ +    P  YVQY  AR +SI R
Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     ++  D    N        D     +   LA++P +++ A+   EP  +A Y  
Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVKKASEKFEPSIIAKYAL 507

Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           DL+  F+ ++++ R   E+ +L             RL LV A + ++   L ++GV +P 
Sbjct: 508 DLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNAPK 556

Query: 584 EM 585
           EM
Sbjct: 557 EM 558


>gi|325684309|gb|EGD26480.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 565

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 257/604 (42%), Gaps = 113/604 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IERP+D   G  +      L++ +   P  IA  +    KID        A   +IN 
Sbjct: 25  VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +L  S     IL  I+     YG   +G G  V+ E+ S N   PM +GH R  ++G+ +
Sbjct: 82  FLDKSQTGAAILREILADPENYGARDLGHGRNVSTEYSSPNIAKPMGMGHLRSTMIGEAI 141

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203
           A ++A  G++  R  Y+ D G Q   +  +        ++ ND+D+ +        YY  
Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193

Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           V +    +E  +      ++ S+L +  EE  +     ++ S++   K+       L++ 
Sbjct: 194 VRINREAEEHPEYDEEGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YNMLDVH 249

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E    +    PI+     + R+    +G+L   KS+  +  D+++  L      
Sbjct: 250 FDSFTGEAFSAQMMDEPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  PL+  KS+G+ TY   DLA   Y K  Y+  F   IYV+G +   Y ++L A 
Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTYD--FYKSIYVVGQEQEVYFQQLRAC 344

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +    A  +++      +  +G   KMS R G+ + L  V++E              
Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401

Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  +R+N   +DF+  + VK + +  P  YVQY+ AR  
Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--VDFNLEEVVKFEGETGP--YVQYSRARGE 457

Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            + R++    F D D            ++    E  L+  +  Y   I+ A    +P  +
Sbjct: 458 RLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMGRYADTIQKAMETYDPSAI 506

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++ V++
Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561

Query: 582 PNEM 585
           P+EM
Sbjct: 562 PDEM 565


>gi|300855348|ref|YP_003780332.1| arginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300435463|gb|ADK15230.1| arginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 564

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 229/548 (41%), Gaps = 110/548 (20%)

Query: 88  FINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ +  L  ++  G  YG++ +GKG  V +EF S N   P HVGH     V
Sbjct: 77  YLNFFVDKAAFTKDTLEKVLKEGENYGKSELGKGKNVVVEFSSPNIAKPFHVGHLFSTSV 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G+ L  +++  GY  TR  ++ D G Q   L +S + R+  + +L+ +    P      +
Sbjct: 137 GNALYKIISSQGYNCTRINHLGDWGTQFGKL-ISAYKRWCDEDSLHKD----PIKELLRI 191

Query: 205 YLKHVGKELADK----------YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKA 251
           Y+K    E A+K          Y  +L +  EE+   W    KD S++   KI   DL  
Sbjct: 192 YVKF--HEEAEKDPSLDEEGRMYFKKLEDGCEEEVALWKKF-KDLSLREFKKIY--DL-- 244

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           LN++ D +  E  F+      + D ID          GIL                    
Sbjct: 245 LNVEFDSYAGES-FYSDKMDAVVDEIDKT--------GILVDSNGA-------------- 281

Query: 312 RSTMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVK 365
              ++ DD + P   + KSDG+  Y   DL    Y K  Y+  FD  IYV+G D S Y +
Sbjct: 282 -KVVMLDDYNLPPCIVKKSDGATIYATRDLTAAIYRKKTYD--FDKCIYVVGLDQSLYFR 338

Query: 366 RLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAGDFITLR------------- 411
           ++ A    + +      V +   LVR        K+S R GD I L              
Sbjct: 339 QIFATLKLMGKDWVDSCVHVGFGLVRF----ADKKLSTRKGDVIFLEDLLNRAIERTLEI 394

Query: 412 ------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAY 458
                        V  ++G  +V F  L       + FD+ ++   + +  P  YVQY+Y
Sbjct: 395 INEKNPELENKEEVAKKIGVGAVIFTYLKNNRERDIVFDWNEMLSFEGETGP--YVQYSY 452

Query: 459 ARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           AR +SI R+A   I  ++D+                 E +LI  L  + + + +A    E
Sbjct: 453 ARGKSILRKAPAGISENVDYSKLSSK----------EEFELIKILHGFNKAVLSAINKLE 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ +  Y+ D A  F+  ++          + A +  +   R+QLV A   +I +GLN++
Sbjct: 503 PFIVTRYVIDAAKAFNKFYNAHS------IINAEDEGVKAARIQLVKASCQVIKNGLNLL 556

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 557 GIDVVEKM 564


>gi|238897849|ref|YP_002923528.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511649|sp|C4K487|SYR_HAMD5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229465606|gb|ACQ67380.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 576

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 247/579 (42%), Gaps = 75/579 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++   + P  +AE ++  + +      V IAG GFIN++L+  ++ + +
Sbjct: 37  GDYQANGVMSAAKKQRIPPRELAERVLEHLDLSDIAKKVEIAGPGFINIFLNEQWISQKI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            S+ + G + G   +    ++ I++ + N    MHVGH R  ++GD +A  ++F G+ V 
Sbjct: 97  ESVFI-GPKLGLTPVTP-QRIVIDYSAPNVAKEMHVGHLRSTIIGDAMARTLSFLGHHVI 154

Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKH-----VGKELADK 216
           R  +I D G Q   L A     ++  AL    SDL   Y      KH     +  + A  
Sbjct: 155 RANHIGDWGTQFGMLIAYLEKIQHDHALEMVLSDLEHFYREAK--KHYDEDEIFAQRARD 212

Query: 217 YSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           Y  +L +   +  E W  +V     Q  +   R  LK      D+ + E  ++   P+ +
Sbjct: 213 YVVKLQSGDPYCREMWRKLVDITMTQNHLSYER--LKVTLTPEDM-MGESLYNDMLPNIV 269

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D+I          +G+    K + +    ++  Q       +G+ +   + K DG Y Y
Sbjct: 270 EDLI---------AKGV--AVKDQGSVLVFLEEYQ-----NKIGEPMGVVIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY------VKRLEA-VAAAVSEKKAQINVLL 385
              D+A  K + E    D ++Y + S  + +      + RL   V  +VS +     ++L
Sbjct: 314 ATTDIACVKYRCETLKADRILYYIDSRQNQHLAQVWTITRLAGYVPESVSLEHHMFGMML 373

Query: 386 CELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVRFMM 426
            +  + +  R G  +K+S       +RAG  I           L +++  V   +V++  
Sbjct: 374 GKDGKPFKTRTGGTVKLSDLLDEAVERAGQLIRGKNPDLNETDLNNLIQAVAIGAVKYAD 433

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +  +    FD+ ++    + N   Y+QYAY+R  S+F+++      LD       VI 
Sbjct: 434 LSKNRTTDYIFDWDRML-SFEGNTAPYIQYAYSRVTSLFKKS-----GLDEKKIMSPVII 487

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           QE +    E  L + L ++  +I        P+ +  YLYDLA+ F   + H        
Sbjct: 488 QEEK----ERSLAILLLQFEEMISTVARDGTPHLMCSYLYDLATRFSIFYEH------CP 537

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A N ++   RL+L    A  +  GL  +G+E+   M
Sbjct: 538 ILNAKNEQIRQSRLKLAWLTAKTLKLGLKNLGIETVERM 576


>gi|309791778|ref|ZP_07686266.1| arginyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226184|gb|EFO79924.1| arginyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 573

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 126/568 (22%), Positives = 231/568 (40%), Gaps = 78/568 (13%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGI 110
           ++ LGL P  +A  + A I + PD  + +V  AG  F+N  L P  L + +L+ I   G 
Sbjct: 48  AKALGLPPPQLANELAASITLAPDSLIGAVSAAGP-FLNFSLHPQRLAEAVLAEIAQQGA 106

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            YG +  G G  + +++ + N    MHVGH R  ++G +L ++    GY V  + ++ D 
Sbjct: 107 AYGTHSDGTGQMIVVDYSAPNIAKRMHVGHIRSTIIGQSLVNIFRALGYTVVGDNHLGDW 166

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKW 229
           G Q   + L+    Y +     ++ L              K+  D   ++   +   E+ 
Sbjct: 167 GKQFGVV-LAAIELYGRPAVEGEAALEALEAQYARYAAAAKDQPDLDEAARHWSLRLEQG 225

Query: 230 LPIVKD---YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            P  ++   + V   M+  + +   L +  D    E  +    P  I + +D        
Sbjct: 226 DPQARELWQWCVDLTMRAAQRNYDRLGVHIDHAYGESFYEHMLPGVIAEALD-------- 277

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY- 345
            +G+    +       D+++                 L +SDG   Y   DLA    +  
Sbjct: 278 -KGVAQREEGGAVVITDLEKLPTFL------------LQRSDGGTLYMTRDLATVLFRLD 324

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRA 404
           E     +IYV+G   + ++++L A+  A+   + +I+++      ++   G P  +S R 
Sbjct: 325 EFSPTRIIYVIGEPQALHLRQLFALTRAMGHAR-EIDLVHVAFGTVFDASGQP--LSTRR 381

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G+ + L  ++DE                           VG  +V +  L++     +  
Sbjct: 382 GNMVYLESLLDEAVARALAVVEQKSPDLPAEEKQAVAEAVGVGAVVYNDLYQDTKRNITL 441

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+ ++   ++ N   Y+QY++ARC SI R+      DL       +          SE++
Sbjct: 442 DWDRML-ATEGNSATYLQYSHARCGSILRRGAADGHDLAHVALLTH---------PSEVR 491

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI HLA  P  +  A     P+ +A + Y  A  F      G    +   ++A   +L  
Sbjct: 492 LIKHLARLPDALREAGSRYAPFVIADWCYTTAREF------GVFFEQCPVLKAEQVELRS 545

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL LV A A  +  GL ++G+++P  M
Sbjct: 546 ARLALVAATARALKVGLGLLGIQAPERM 573


>gi|319946042|ref|ZP_08020291.1| arginine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747850|gb|EFW00095.1| arginine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 562

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 149/605 (24%), Positives = 249/605 (41%), Gaps = 120/605 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KID       +A   ++N +
Sbjct: 26  LLEQPKSSDLGDIAF-PAFSLAKIERKAPQAIAADIAE--KIDASHFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  +++ +++ +G +YG+   G G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSQISDQVIKAVIQAGADYGQQDEGHGGNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D               
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187

Query: 211 KELADKY---SSELLNFP---EEK--WLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            EL   Y   ++E+ N P   EE   W   ++D   +A  + +  RD+ L   N  + + 
Sbjct: 188 -ELLKLYVRINAEIENDPALDEEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLL 246

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E D   G+ +   D +D  A Q    +G+L   K  +  + D               D
Sbjct: 247 GVEFDSLNGE-AFYNDKMDE-AVQILEEKGLLKESKGASIVELD---------------D 289

Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           V+ P   + KSDG+  Y   D+A   Y    Y   F   IY +G + S + ++L+AV   
Sbjct: 290 VNLPPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKK 347

Query: 374 V----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           +    S+    ++  L    R        K+S R G+ I L   + E             
Sbjct: 348 MGFDWSDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKN 400

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRS 463
                       VG  +V+F  L        DFD    V  + +  P  YVQYAYAR +S
Sbjct: 401 PELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQS 458

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A           F  +     S  D    ++I  L ++ RV++ A    +P  +A 
Sbjct: 459 ILRKAN----------FTPSADATYSLSDPESWEIIKLLQDFARVVKRAAENYDPSLIAK 508

Query: 524 YLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           Y  +LA  F+ +++H R   E+P               RL L ++ A ++   L ++GVE
Sbjct: 509 YAINLAQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVE 557

Query: 581 SPNEM 585
           +P +M
Sbjct: 558 APEKM 562


>gi|297566840|ref|YP_003685812.1| arginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851289|gb|ADH64304.1| arginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 612

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 150/631 (23%), Positives = 272/631 (43%), Gaps = 116/631 (18%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  IV++       G   +  A  L+R L   P  IA  I  ++++ P V   F  G G+
Sbjct: 24  LPEIVLQETPPGKGGDYGSPVAFTLARTLRKAPPQIALEIAQKLELPPFVRRAFAVG-GY 82

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N  L P++L       V +     R L  +  KV IE  + NP   +HVGH R   +GD
Sbjct: 83  LNFELDPAFL-------VQAATHPPRPLPPQPGKVLIEHTAVNPNKELHVGHLRNVCLGD 135

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +A ++ ++G +V    YI+D G Q    A S+F      L  + S   + +    Y++ 
Sbjct: 136 AVARILRYAGRQVEVLNYIDDTGRQA---ADSLFALQHYGLVYDGSKKYDHWVGEAYVR- 191

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM-KIIRDDLKA---LNIQHDIFISEDD 264
           + ++L D+     L       L  ++   ++A + KI+R  L+    L  ++D+ + E D
Sbjct: 192 LHRDLEDEAKKAQLEPQIALVLHRLEAGELRAEVDKILRAQLETMLRLGARYDLLVWESD 251

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
             R     +   +  L R  +V    L P + K      +D       ++ +   ++ P 
Sbjct: 252 IVR--EGLLHKALAILERSPHV----LRPSEGKYAGALVID-------ASAIIPGLEDPY 298

Query: 324 --LLKSDGSYTYFAADLAY--FKCKYERG--FD------------NMIYVMG-----SDH 360
             L++S+G+ TY+A D+A+  +K    +G  FD             ++Y         +H
Sbjct: 299 FVLVRSNGASTYYAKDIAFQMWKMGLLQGLKFDPYPGDYPAFTPGRLMYTSTPSGHLQEH 358

Query: 361 SGYVKRLEAVAAAVSEK----KAQINV------------LLCELVRLYRDGMPIKMSKRA 404
           +G  + +  + A  S      +A + V            L  E V L  +G   +MS R 
Sbjct: 359 TGASETINVIDARQSHPQMIVRAGLEVAGRHDLAEGAYHLAYETVLL--EGK--QMSGRK 414

Query: 405 GDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDF 439
           G  +++  V+DE                         +G  +VRF M+  +  + +DF +
Sbjct: 415 GITVSVDEVLDEAVQRARAIIAEKNPLHPDPQTAAEQIGVGAVRFAMVKTEPKKQIDFRY 474

Query: 440 CKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---E 495
            +    +    P  Y+QYA+AR  SI R+A++           + V+ +  ++  +   E
Sbjct: 475 DQALSFEGDTGP--YLQYAHARAGSILRKAEE-----------QGVLGEAPDYTQATPYE 521

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANNRK 554
           + L   L  +P V++ A  ++ P+ LA YL DL + ++G++ +   E      V +    
Sbjct: 522 VGLAKALLRFPAVVQEAAASKAPHVLAQYLLDLGAAWNGYYNAKTAEGKPATAVLSAPVG 581

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  +RL+LV ++   +N GL ++G+ +P  M
Sbjct: 582 LRGVRLELVKSLKQTLNQGLTLLGLNAPEVM 612


>gi|256026756|ref|ZP_05440590.1| arginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764754|ref|ZP_06524132.1| arginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716309|gb|EFD80321.1| arginyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 569

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKVIGDNPRKIAEKIKNNFPYGNVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            SI   G +Y  + + +  KV ++F S N    MH+GH R  ++G+++  +  + GY+V 
Sbjct: 96  DSIKKIGEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESVCRIYRYLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      + 
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMA 266

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D++  L  +G   +        +  +    D K  LF            + K DG+Y Y 
Sbjct: 267 DVVKELIDKGLAVD-------DEGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDMLDWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+ ++     I 
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVAEQNIDLNENI----EIK 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L 
Sbjct: 481 TDNKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533

Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 -----NQDIETLKSRALLIKKTGKVLKDGLGLLGIPVLNKM 569


>gi|332365316|gb|EGJ43079.1| arginine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 562

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 247/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  I+  G +YG+   G G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEIIKDGADYGQQNEGNGENITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRRIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|317048536|ref|YP_004116184.1| arginyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950153|gb|ADU69628.1| arginyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 576

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 235/596 (39%), Gaps = 109/596 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG  P  +AE ++  + +      V IAG GFIN++L   +L    
Sbjct: 37  GDYQANGIMAVAKKLGQAPRQLAEQVIQHLDLQGIASKVEIAGPGFINIFLDRQWLAD-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++  ++    G + +   T V I++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 96  AAQALTLPRLGVSSVAAQTIV-IDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E    G 
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKQQSEHHEDIALADLEAFYREAKRTYDEDEAFAE-RARGY 213

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K  G    D+Y   +       W  +V D ++    K+  D L     + D+ + E  
Sbjct: 214 VVKLQG---GDEYCRTM-------WKKLV-DITMSQNQKVY-DRLNVTLTRKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P  + D+ +         +G+    +  T    D  + +        G+ +   +
Sbjct: 261 YNDMLPGIVADLKE---------KGLAVISEGATVVFLDEFKNK-------EGEPMGVIV 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYVPESVPL 364

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           +     ++L       +DG P K   R+G  I L  ++DE                    
Sbjct: 365 EHHAFGMMLG------KDGRPFKT--RSGGTIKLADLLDEAVERALALVSEKNPEMSSDE 416

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A 
Sbjct: 417 LQALAEVVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKAG 475

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                L  ++    V+ +E E      QL   L ++  VI        P+ +  YLYDLA
Sbjct: 476 IAADSLQGEI----VLSEERE-----AQLATRLLQFEDVITQVARDGTPHVMCAYLYDLA 526

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F G + H         + A   ++   RLQL    A  +  GL+ +G+++   M
Sbjct: 527 GLFSGFYEH------CPILTAEEEQVRNSRLQLAALTAKTLKQGLDTLGIKTVERM 576


>gi|260585076|ref|ZP_05852818.1| arginine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157272|gb|EEW92346.1| arginine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 563

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 250/592 (42%), Gaps = 94/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P+    G L+   A  L++ L   P  IA+ IV  +  D  +      G  + N +
Sbjct: 27  MIEVPKYAEQGDLAF-PAFSLAKVLRKAPQAIAQEIVEAVS-DEHISQAVAMGP-YANFF 83

Query: 93  LSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS   +  + L +++     YG    G+G    ++  S N   PM +GH R  V+G+ +A
Sbjct: 84  LSKGKFADETLHTVLEQRENYGNFDFGQGRNAIVDMSSPNIAKPMSMGHLRSTVIGNAIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +L    GY   +  ++ D G Q   L ++   W  ++A+  +    P      +Y+K   
Sbjct: 144 NLEKKVGYNPIKINHLGDWGTQFGKLIVAYKKWGTKEAVEQD----PIAELLRLYVKF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHR 267
            + A++ SS  L      W   ++D   +A         + LK  N  +D+     D + 
Sbjct: 198 HDEAERDSS--LEDEGRAWFKKLEDGDAEAEELWNWFKSESLKEFNRIYDVLGITFDSYN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRP 323
           G+      +  I++ L   G                   +DR      +T+V  D  D P
Sbjct: 256 GEAFYNDKMDPIVEYLESNGI----------------TTIDRG-----ATVVHLDKYDLP 294

Query: 324 ---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------- 370
              + KSDG+  Y   DLA   Y K  Y+  F   IYV+G++ + + ++L+AV       
Sbjct: 295 PALIKKSDGATLYITRDLAAAHYRKETYD--FAKNIYVVGNEQANHFRQLKAVLNEMGRD 352

Query: 371 ----------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                              +S +K +I VLL E++R   +    ++  +  +      V 
Sbjct: 353 WQENMIHVGFGLITLGGKKLSTRKGKI-VLLEEVLREAEELALKQIEAKNPNLPNKEQVA 411

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            +VG  +V F  L    +   DF+  +V + + +  P  YVQY  AR  SI R+A  +  
Sbjct: 412 KQVGVGAVIFHDLKNDRTNNFDFNLEEVVQFEGETGP--YVQYTRARAMSILRKA-GVSV 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           DL   L         S  D    +++  +  YP +++ A    EP  ++ Y+  LA  F+
Sbjct: 469 DLSQPL---------SLEDDYAWEVLKQIENYPNIVKYAESKFEPSVISKYVISLAQAFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++++ R       +   +  L   RL LV A A I+  GL I+GVESP+EM
Sbjct: 520 KYYANSR-------ILQEDEGLNA-RLALVEATAVILKQGLAILGVESPDEM 563


>gi|297201498|ref|ZP_06918895.1| arginyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197716790|gb|EDY60824.1| arginyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 584

 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 135/605 (22%), Positives = 239/605 (39%), Gaps = 110/605 (18%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A  +V+RI     +  V ++G GF+N+ L+   
Sbjct: 33  RRSDRADFQANGILALAKKAKANPRDLATQVVSRITTGDVIKDVEVSGPGFLNITLTDKA 92

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++    G   G  L  +     I++   N    MHVGH R AV+GD L  ++ F+
Sbjct: 93  ITENLAARYEDGDRLGVPLKDEPGTTVIDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFT 152

Query: 158 GYEVTREYYINDAGAQINTL------------------------ALSVFWRYQQALYNND 193
           G +    ++I D G Q   L                         L+  ++  + ++++D
Sbjct: 153 GEKTIGRHHIGDWGTQFGMLIQYLIENPGELAPPDEVDGEQAMSNLNRVYKASRVVFDSD 212

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            +  E     V    V  +  DK + EL       W   V +  V       + D++   
Sbjct: 213 EEFKERARKRV----VALQSGDKETLEL-------WQQFVDESKVYFYSVFEKLDME--- 258

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I+ D  + E  ++ G P   R +++ +       EG L                 + F  
Sbjct: 259 IRDDEIVGESAYNEGMPETAR-LLEEMG-VAVRSEGALV----------------VFFDE 300

Query: 314 TMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRL-EA 369
               DD   PL+  K+DG + Y A+DL   + +  +     ++YV+    S + K + EA
Sbjct: 301 IRGKDDQPVPLIVQKADGGFGYAASDLTAIRNRVTDLHATTLLYVVDVRQSLHFKMVFEA 360

Query: 370 V--AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416
              A  +S+     N+    +  L  DG P K   R G+ + L  ++DE           
Sbjct: 361 ARRAGWLSDGVTAHNMGYGTV--LGADGKPFKT--REGETVKLEDLLDEAVQRAAEVVRE 416

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR
Sbjct: 417 KAQDLTEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYAR 475

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            +SI R+A ++ P              E E   +E  L +HL  +   +  A     P+K
Sbjct: 476 IQSILRKAGEVRP----------AARPELELADAERALGLHLDAFGSTVFEAAAEYAPHK 525

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LA YLY LAS++   +       +   ++A+       RL L    A  ++ G+ ++G+ 
Sbjct: 526 LAAYLYQLASLYTSFYD------KCPVLKADTPAQVENRLFLCDLTARTLHQGMALLGIR 579

Query: 581 SPNEM 585
           +P  +
Sbjct: 580 TPERL 584


>gi|187932062|ref|YP_001892047.1| arginyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691512|sp|B2SDQ4|SYR_FRATM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187712971|gb|ACD31268.1| arginyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 581

 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 147/630 (23%), Positives = 262/630 (41%), Gaps = 106/630 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++NYL E   K+  +   ++   ++V     D   GH   N AM L++     PL IAE 
Sbjct: 3   IENYLSETLAKVFQKLGYVESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G        KV ++F
Sbjct: 61  IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   +  +  Q
Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234
            +Y +++    G YP      V +ELA+ Y          +N  E+  L   +       
Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 + V+  +  ++ D  +L++  D+++ E D ++     I ++I       ++YE 
Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346
                  +     D ++            D   PL  +K DG   Y   DLA  ++   +
Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397
              D +IYV+    S + K++ +VA     VSEK        C+L  +       +DG P
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385

Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            K  +           +A ++   R        ++D++   +++F  L    +    FD 
Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495
            K  + + K  P  Y+ Y   R +SI R+   IF D  D     ++  V+   +E+   E
Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +   N        ++  L
Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L  A    +    ++IG+  P  M
Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581


>gi|50553350|ref|XP_504086.1| YALI0E17985p [Yarrowia lipolytica]
 gi|49649955|emb|CAG79679.1| YALI0E17985p [Yarrowia lipolytica]
          Length = 647

 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 132/548 (24%), Positives = 226/548 (41%), Gaps = 94/548 (17%)

Query: 88  FINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  + SP  L  I +  I+   +EYG + +GKG KV IEF S N   P H GH R  ++
Sbjct: 144 FMQFFFSPKLLYNIVIKDILERKLEYGSSDVGKGKKVVIEFSSPNIAKPFHAGHLRSTII 203

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPG 203
           G  L++L    G+EV R  Y+ D G Q   LA+  F RY   +Q + +    L E Y   
Sbjct: 204 GGFLSNLHEKLGWEVIRLNYLGDWGKQFGVLAVG-FERYGSEEQLVTDPIQHLFEVYVRI 262

Query: 204 VYLKHVGKELADKYSSELLNFPEEK---WLPIVKDYSVQAM----------MKIIRDDLK 250
                  KE + + + E  +  ++K   +   ++D   +A+          ++  +D   
Sbjct: 263 NKDMEAEKEASKEATGEESSATDDKAREYFRKMEDGDKEALALWSRFRDLSIERYKDTYA 322

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            LNI +D +  E        S + +    +A+  +V +G++             DR   L
Sbjct: 323 RLNIHYDSYSGE--------SQVPEEFMKMAKDLFVEKGLVHE-----------DRGAKL 363

Query: 311 FRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------- 361
              T     + + ++ K DG+  Y   D+     + E+  FD MIYV+ S          
Sbjct: 364 IDLTKFNKKLGKVIVEKKDGTSLYITRDVGGAIARMEKYKFDKMIYVIASQQDLHCQQFF 423

Query: 362 --------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                    +V RL+ V       +S +K  + V L  ++   ++ M   M K    +  
Sbjct: 424 RILKECGFDWVDRLQHVNFGLVQGMSTRKGTV-VFLSNILEEVKESMHNVMKKNEVKYNQ 482

Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465
           + +   + D VG  SV    +  K      FD+ ++   +    P  Y+QYA++R RS+ 
Sbjct: 483 VENPEEIADLVGISSVMIQDMSAKRVNNYKFDWDRMLSFEGDTGP--YLQYAHSRLRSVE 540

Query: 466 RQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           R++     +     DF L    +            +LI  L ++P V+ NA   QEP  +
Sbjct: 541 RKSGMTIDENLASADFSLLTEPIAD----------ELIRTLTQFPDVVLNAGKTQEPATI 590

Query: 522 AFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             YL+ L    +S +   W  G+E             L   RL L  +   ++ +G+ ++
Sbjct: 591 VTYLFKLTHQVSSCYDVLWVAGQEEA-----------LAKARLSLYSSARQVLYNGMVLL 639

Query: 578 GVESPNEM 585
           G+   + M
Sbjct: 640 GLTPVDRM 647


>gi|297563083|ref|YP_003682057.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847531|gb|ADH69551.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 581

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 240/594 (40%), Gaps = 108/594 (18%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL----RKIL 102
            NAA+ L++ LG  P  ++  I+  + +      V ++G GFINL L   ++    R++L
Sbjct: 41  ANAALALAKRLGRKPREVSAAIMEHLDVADVCRDVEVSGPGFINLTLREDWIAGQTRRLL 100

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +   E  R        + +++ + N    MHVGH R  VVGD LA  + F G+ V 
Sbjct: 101 DDPRLGVPEQERQ------NIPLDYSAPNVAKEMHVGHLRTTVVGDALARTLEFLGHNVI 154

Query: 163 REYYINDAG-------------------AQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           R+ +I D G                   A + T   + F++  +  +++    P+ +   
Sbjct: 155 RQNHIGDWGTPFGMLIEHLLEVGEDSPEADLVTTDPNAFYQAARTKFDSSGPGPDDFAAR 214

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
              + V  +  D+ +  L      K + + K Y  +   K+       + +  +    E 
Sbjct: 215 ARRRVVSLQSGDEETLRLWR----KLVGLSKVYFNKVYAKL------GVTLTDEDLAGES 264

Query: 264 DFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDV 320
            ++    + + D+ + L  +G   + +G L          C       +F     G +D 
Sbjct: 265 SYN----AALADVCEELEAKGIAEISDGAL----------C-------VFLEGFTGREDK 303

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA------ 371
             PL+  KSDG Y Y   DLA  + + +    D ++YV+G+  + + K + A A      
Sbjct: 304 PVPLIVRKSDGGYGYATTDLATVRHRVDDLKADRILYVVGAPQAMHFKMVWATAREAGWL 363

Query: 372 -AAVSEKKAQINVLLCELVRLYR--DGMPIKMS-------KRAGDFITLR---------- 411
              V     QI  +L    ++ R   G P+++        +RA   +             
Sbjct: 364 PEGVETVHVQIGNVLGSDGKILRTRSGAPVRLMALLDEAIERAAAVVAQNRPDLDAEGQA 423

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +  +VG  +V++  L   +     FDF ++   +  N   Y+QYA AR RSIFR+    
Sbjct: 424 EIARQVGIGAVKYADLSVAHDTEYTFDFDRMLALTG-NTGPYLQYAQARIRSIFRKGGLE 482

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                 D+         S  + +E  L + L E+  V+       +P++L+ YL++LA  
Sbjct: 483 LSQARGDI---------SVSEGAERDLALKLLEFGAVVAQVGDLLQPHRLSTYLFELAQS 533

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + H         + A N      RL LV     ++  GL+++GVE+P  M
Sbjct: 534 LTAFYEH------CPVLTAPNEAERESRLALVAVAFRVLVQGLDLLGVEAPEHM 581


>gi|259048230|ref|ZP_05738631.1| arginine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035291|gb|EEW36546.1| arginine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 563

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 249/603 (41%), Gaps = 106/603 (17%)

Query: 29  LDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +D IV  IE P+    G L+   A  L++ L   P  IA  IV  +  D  +      G 
Sbjct: 21  VDEIVSMIEVPKYANQGDLAF-PAFTLAKVLRKAPQAIATEIVEAVS-DKHIARAEAMGP 78

Query: 87  GFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            + N +L  S +  ++L  ++  G  YG    G+G KV I+  S N   PM +GH R  V
Sbjct: 79  -YANFFLERSAFADEVLKEVLELGEHYGDWDYGQGRKVVIDMSSPNIAKPMSMGHLRSTV 137

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G+ +A+L    GYE  R  ++ D G Q   L  +      + L   D   P      +Y
Sbjct: 138 IGNAIANLEKKVGYEPIRINHLGDWGTQFGKLIEAYKLWGSEELVKAD---PIAELIKLY 194

Query: 206 LK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFIS 261
           ++ H   EL        L+     W   ++D   +A  + +  R + LK  N  +D+   
Sbjct: 195 VRFHEEAEL-----DPTLDDKGRAWFKKLEDGDAEAVRLWEWFRSESLKEFNRVYDLLGV 249

Query: 262 EDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             D + G+   +   D++ ++         +L      T    D+++  L          
Sbjct: 250 TFDSYNGEAFYNDKMDVVVDMLEDA----NLLKVDNGATI--VDLEKYDL---------- 293

Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              P L  KSDG+  Y   DLA   Y K  Y+  F   IYV+G + S + K+L+AV    
Sbjct: 294 --PPALIKKSDGATLYMTRDLAAANYRKNTYD--FAKCIYVVGMEQSNHFKQLKAVLK-- 347

Query: 375 SEKKAQINVLLCELVRLYRDGMPI----KMSKRAGDFITLRHVVDE-------------- 416
                ++N+   E +     G+      K+S R G  I L  V+ E              
Sbjct: 348 -----ELNLPWAETIVHIPFGLITLNGKKLSTRKGKIILLEGVLKEATELALKQIEAKNP 402

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462
                      VG  +V F  L  KN    +FDF     V+ + +  P  YVQY +AR  
Sbjct: 403 SLENKEAVAHAVGVGAVIFHDL--KNDRTNNFDFALEEVVQFEGETGP--YVQYTHARAM 458

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A              ++    S  D    +++  +  YP V+  A    EP  +A
Sbjct: 459 SILRKANHTV----------DMTEAFSLTDDDAWEVLKLIENYPNVVRFAEEKCEPSAIA 508

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+ +LA  F+ +++H +    L   +A N      R+ LV   AS++  GL ++GV +P
Sbjct: 509 KYVINLAQAFNKYYAHTK---VLVEDEAFNS-----RIALVQTTASLLKQGLALLGVAAP 560

Query: 583 NEM 585
           +EM
Sbjct: 561 DEM 563


>gi|15618481|ref|NP_224766.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836101|ref|NP_300625.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752468|ref|NP_444730.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241923|ref|NP_876864.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|7674357|sp|Q9Z7Y3|SYR_CHLPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|4376863|gb|AAD18710.1| Arginyl tRNA Transferase [Chlamydophila pneumoniae CWL029]
 gi|7189110|gb|AAF38053.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978941|dbj|BAA98776.1| arginyl tRNA transferase [Chlamydophila pneumoniae J138]
 gi|33236433|gb|AAP98521.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 561

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 238/584 (40%), Gaps = 110/584 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA +  +P    + IAG GFIN   SP +L + L
Sbjct: 39  GHYQCNDAMKLARVLKKAPRAIAEAIVAELPQEP-FSLIEIAGAGFINFTFSPVFLNQQL 97

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                  ++ G   + +  K+ I+F S N    MHVGH R  ++GD+LA + ++ G++V 
Sbjct: 98  EHFK-DALKLGFQ-VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVL 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  +I D G      A  +   Y Q    + SDL              ++L   Y    +
Sbjct: 156 RLNHIGDWGT-----AFGMLITYLQENPCDYSDL--------------EDLTSLYKKAYV 196

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLA 281
            F  ++     K  S Q ++ +   D +A+ I   I   SE  F +     I DI+D + 
Sbjct: 197 CFTNDEEF---KKRSQQNVVALQAKDPQAIAIWEKICETSEKAFQK-----IYDILDIVV 248

Query: 282 --RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRPLL--KSDGSYTY 333
             R    Y   LP          D+++K LL  S     +  +    P +  KSDG Y Y
Sbjct: 249 EKRGESFYNPFLPEIIE------DLEKKGLLTVSNDAKCVFHEAFSIPFMVQKSDGGYNY 302

Query: 334 FAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              DLA  + + E    D +I V     S + + LEA A A      Q  +       L 
Sbjct: 303 ATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAG--YLQPGIFSHVGFGLV 360

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425
            D    K+  R+G+ + LR ++D                            +G +++++ 
Sbjct: 361 LDPQGKKLKTRSGENVKLRELLDTAIEKAEEALREHRPELTDEAIQERAPVIGINAIKYS 420

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L    +    F F K+  + + N   ++ YAY R + I R               R  I
Sbjct: 421 DLSSHRTSDYVFSFEKML-RFEGNTAMFLLYAYVRIQGIKR---------------RLGI 464

Query: 486 PQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--S 537
            Q S     E+Q      L + L  +P  +E+      P+ L  YLY+L   F+G +  S
Sbjct: 465 SQLSLEGPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDS 524

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           H +++P  +            RL L      ++ +G++++G+++
Sbjct: 525 HIQDSPYAK-----------SRLFLCALAEQVLATGMHLLGLKT 557


>gi|84393465|ref|ZP_00992221.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375893|gb|EAP92784.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 577

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 239/610 (39%), Gaps = 136/610 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D     V IAG GF+N++L  ++L +  
Sbjct: 37  GDYQANGVMGVAKRLGTNPREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDEAFLAQQA 96

Query: 103 ------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
                 S + V+  E           +  ++ + N    MHVGH R  ++GD +   + F
Sbjct: 97  DAALADSRLGVTAAE--------AQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEF 148

Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDL- 196
            G++V R  +I D G Q   L                    L  F+R  + LY+ D +  
Sbjct: 149 LGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLYDEDEEFA 208

Query: 197 --PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
               GY        V  +  D+Y +E+       W  +V    VQ      R +   +++
Sbjct: 209 VKARGYV-------VKLQSGDEYCAEM-------WKKLVDVTMVQNQRNYDRLN---VSL 251

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312
             D  + E  ++      + +I+ +L  QG   E                D  Q++F   
Sbjct: 252 TRDDVMGESMYNH----MLSNIVSDLQTQGLAKES---------------DGAQVVFLDE 292

Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363
                GD +   + K DG + Y   D+A  K ++E  G D ++Y + S    +       
Sbjct: 293 YKNKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELGADRVLYFIDSRQHQHLMQAWTI 352

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +
Sbjct: 353 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRATQ 404

Query: 424 FMMLWRKNSELLD--------------FDFCKVKEQSKENPVF--------------YVQ 455
             ++  KN EL +                +  + +    + VF              Y+Q
Sbjct: 405 --LIESKNPELAEDEKKTIANTVAMAAVKYADLSKHRTTDYVFDWENMLAFEGNTAPYMQ 462

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R  SIF +A      L+ D+     I +E      E  LI  L ++   +++    
Sbjct: 463 YAYTRVASIFAKAGISMDSLEGDI----KITEE-----KEKALIAKLLQFEEAVQSVARE 513

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ +  YL++LA  F   +           + A +  +   RL+L    A  I  GL+
Sbjct: 514 GQPHIMCSYLFELAGQFSSFYE------ACPILVAEDETVKQSRLKLAALTAKTIKQGLS 567

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 568 LLGIETLERM 577


>gi|256844871|ref|ZP_05550329.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718430|gb|EEU31985.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 569

 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 252/586 (43%), Gaps = 98/586 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKNNFPCGDVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G  Y  + + +  KV I+F S N    MH+GH R  ++G+ +  +  F GY+V 
Sbjct: 96  NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR--PLL--KSDGS 330
           +++D                        D D  +++F      D+ D   P +  K DG+
Sbjct: 271 ELVD-------------------KKLAVDDDGAKVVFF-----DEKDNLFPCIVQKKDGA 306

Query: 331 YTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           Y Y  +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++
Sbjct: 307 YLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-II 365

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
           R + DG+   +S R G+ I L  ++DE                           VG  SV
Sbjct: 366 R-FADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSV 421

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+     +
Sbjct: 422 KYADLSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN-----K 475

Query: 483 NV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           N+ I  +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++   
Sbjct: 476 NIEIKTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC-- 530

Query: 542 NPRLRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
            P L      N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 531 -PIL------NQDIETLKSRALLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|282897066|ref|ZP_06305068.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9]
 gi|281197718|gb|EFA72612.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9]
          Length = 585

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 217/532 (40%), Gaps = 66/532 (12%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG+DP +IA  IV  + +    +   IAG GFINL L  SYL   L
Sbjct: 40  GDFQANVALSLSKKLGMDPRSIAAAIVEELDVSDLCEVPEIAGPGFINLKLQISYLESQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++I       G   + +  K  ++F S N    MHVGH R  ++GD +A ++ F G++V 
Sbjct: 100 NAIKTDP-RLGVPRVDQPQKQIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y QAL   +  L  G     Y +   +  AD    E+ 
Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPQALTTANV-LNIGDLVSFYRQAKQRFDADPTFQEIA 217

Query: 223 NFPEEKWLPIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP-IRDII 277
                +     +D  ++   +    R + + +    DI I E    RG+   +P +  I+
Sbjct: 218 RQEVVRLQAGAEDTTHAWNLLCAQSRKEFQTIYDLLDIKIVE----RGESFYNPFLSKIV 273

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           ++L + G V E            KC      L   +   G+ +   + KSDG Y Y   D
Sbjct: 274 EDLEKAGLVEEN--------QGAKCVF----LEGFTNREGEALPLIVQKSDGGYNYATTD 321

Query: 338 LAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDG 395
           LA    +  E     +IYV  +  + +  +   VA         + ++     + L  DG
Sbjct: 322 LAALLYRIREDHAKRIIYVTDAGQANHFAQFFQVAQKAGWIPDDVELVHIPFGLVLGEDG 381

Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRF 424
              K   R+GD + L+ ++DE                               VG  +V++
Sbjct: 382 K--KFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIHNVAQTVGISAVKY 439

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L +  +    F + K+    K N   Y+ YAY R + I R+ K  F +L  D     +
Sbjct: 440 ADLSQNRTSSYVFSYDKMLS-LKGNTAPYMLYAYVRTQGISREGKIDFENLAPDA---KI 495

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           I QE     +EL L  HL +   ++        P +L  YLY L+  F+  +
Sbjct: 496 ILQEE----TELALAKHLLQLDDILYQVEQDLLPNRLCEYLYSLSEKFNKFY 543


>gi|134302456|ref|YP_001122426.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166232789|sp|A4IZF4|SYR_FRATW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134050233|gb|ABO47304.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 581

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 106/630 (16%)

Query: 11  LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++NYL E   K+  +    +   ++V     D   GH   N AM L++     PL IAE 
Sbjct: 3   IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G        KV ++F
Sbjct: 61  IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   +  +  Q
Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234
            +Y +++    G YP      V +ELA+ Y          +N  E+  L   +       
Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 + V+  +  ++ D  +L++  D+++ E D ++     I ++I       ++YE 
Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346
                  +     D ++            D   PL  +K DG   Y   DLA  ++   +
Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397
              D +IYV+    S + K++ +VA     VSEK        C+L  +       +DG P
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385

Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            K  +           +A ++   R        ++D++   +++F  L    +    FD 
Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495
            K  + + K  P  Y+ Y   R +SI R+   IF D  D     ++  V+   +E+   E
Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +   N        ++  L
Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L  A    +    ++IG+  P  M
Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581


>gi|45361659|ref|NP_989403.1| arginyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
           tropicalis]
 gi|82186176|sp|Q6P1S4|SYRC_XENTR RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|40787810|gb|AAH64888.1| arginyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 660

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 248/593 (41%), Gaps = 93/593 (15%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +++ L      + P  IA+ IV  I  +  V+ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             K +S ++V+G++    +I +  KV ++F S N    MHVGH R  V+GD++  L  F 
Sbjct: 171 TSKQISKLLVNGVQ--PPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFV 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  ++ D G Q   L   +  ++   L  +    P G            +L   Y
Sbjct: 229 GHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSP---PIG------------DLQSFY 273

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F E++         V  +     + ++A N+  D  +S  +F +     I D +
Sbjct: 274 KESKKRFDEDEEFKKRAYQCVVQLQNKTPNFIQAWNLICD--VSRKEFQK-----IYDCL 326

Query: 278 D--NLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           D   + R    Y+    G++   + K   + D  RK ++F     G  V   ++KSDG +
Sbjct: 327 DISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGRK-VVFPP---GCSVPLTIVKSDGGF 382

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TY  +DLA  K +  E   D +IYV+ S  + +++ + +    +     ++        R
Sbjct: 383 TYDTSDLAALKQRLQEEKADMIIYVIDSGQAIHMQNVFSAGRMIGWYDPKVT-------R 435

Query: 391 LYRDGMPI-------KMSKRAGDFITLRHVVDE------------------------VGS 419
           +   G  +       K   R+GD + L  ++DE                           
Sbjct: 436 IEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLDEGLKRSMEKLKDKGRDKVLTAEELLAAQ 495

Query: 420 DSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
            SV F  +        R N  +  FD  K+ +  + N   Y+ YAY R RSI R A    
Sbjct: 496 TSVAFGCIKYADLSHNRMNDYIFSFD--KMLD-DRGNTAAYLLYAYTRIRSIARLANISD 552

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL        +I +  +    E +L   +  +P +++        + L  YLY+LA+ F
Sbjct: 553 EDLHKAAKETEIILEHEK----EWKLSKCILRFPEILQKILDDLLLHTLCDYLYELATTF 608

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + +     + R       K+ M RL L  A A+++  G +I+G++   +M
Sbjct: 609 TEFYDNCYCVEKDRQT-GQIVKVNMSRLLLCDATAAVMAKGFDILGIKPVQKM 660


>gi|296328834|ref|ZP_06871347.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154065|gb|EFG94870.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 569

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 135/581 (23%), Positives = 247/581 (42%), Gaps = 88/581 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE +         ++ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEVKNNFPYGDVIEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G +Y  + + +  KV I+F S N    MH+GH R  ++G++++ +  F GY+V 
Sbjct: 96  NSIKKIGEDYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESVSRIYRFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRNWLDKKAYKKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D                     +    D K  LF            + K DG+Y Y 
Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEGEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+ Y YAR +SI R+      +L+ DL     I 
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKV----AELNIDLNENIEIK 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E++ + S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L 
Sbjct: 481 TENKIEKS---LATYLLAFPISVLKAGETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533

Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 -----NQDIETLKSRALLIKKTGEVLKEGLELLGIPILNKM 569


>gi|213514264|ref|NP_001133937.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209155884|gb|ACI34174.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 660

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 137/580 (23%), Positives = 246/580 (42%), Gaps = 84/580 (14%)

Query: 49  AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108
           A M+ S+ L ++P  IAE I   I  +  ++   IAG GFIN++L  S++ K+L++++++
Sbjct: 122 AQMMKSKGLKVNPREIAEKIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLLN 181

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G++     + +  KV ++F S N    MHVGH R  ++GD++  L  F GY+V R  ++ 
Sbjct: 182 GVQPPP--LERKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVG 239

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L   +  ++   L  +    P G     Y     KE   ++  E  +F +  
Sbjct: 240 DWGTQFGMLIAHLQDKFPNYLTVSP---PIGDLQAFY-----KESKKRFDEE-EDFKKRA 290

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID--NLARQGYV 286
           +  +VK  S           +K  N+  D  +S  +F +     + + +D   + R    
Sbjct: 291 YQCVVKLQSKDPAF------IKGWNLICD--VSRKEFQK-----VYNCLDIQIIERGESF 337

Query: 287 YE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           Y+     ++   ++K   + D  RK ++F     G  +   ++KSDG YTY  +DLA  +
Sbjct: 338 YQEKMIAVVKEFEAKGLVEMDEGRK-IVFAP---GQQIPLTVVKSDGGYTYDTSDLAALR 393

Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI--- 398
            + ++   D +IYV  S  + + + + A A  +     ++        R+   G  +   
Sbjct: 394 QRLFDEKADIIIYVTDSGQATHFQVVFAAAQMIGWYDPKV-------TRVEHAGFGVVLG 446

Query: 399 ----KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
               K   R+GD + L  ++DE                             V    +++ 
Sbjct: 447 EDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEKDRDKVLSTEELTKAQHSVAFGCIKYA 506

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L         F F K+ +  + N   Y+ YA+ R RSI R A      L       +V+
Sbjct: 507 DLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIDEVALRKAAETTDVL 565

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            Q  +    E +L   L  +P +++        + L  YLY+LA+ F   +       + 
Sbjct: 566 LQHDK----EWKLGKCLMRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDSCYCIEKD 621

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       K+ M R+ L  A A+I+  G +I+G+   + M
Sbjct: 622 RQT-GEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM 660


>gi|254369750|ref|ZP_04985760.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122709|gb|EDO66838.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 581

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 106/630 (16%)

Query: 11  LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++NYL E   K+  +    +   ++V     D   GH   N AM L++     PL IAE 
Sbjct: 3   IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G        KV ++F
Sbjct: 61  IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   +  +  Q
Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234
            +Y +++    G YP      V +ELA+ Y          +N  E+  L   +       
Sbjct: 180 LVYFDEN--YTGEYPTESPITV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 + V+  +  ++ D  +L++  D+++ E D ++     I ++I       ++YE 
Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346
                  +     D ++            D   PL  +K DG   Y   DLA  ++   +
Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397
              D +IYV+    S + K++ +VA     VSEK        C+L  +       +DG P
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385

Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            K  +           +A ++   R        ++D++   +++F  L    +    FD 
Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495
            K  + + K  P  Y+ Y   R +SI R+   IF D  D     ++  V+   +E+   E
Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +   N        ++  L
Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L  A    +    ++IG+  P  M
Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581


>gi|309751074|gb|ADO81058.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 577

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 136/598 (22%), Positives = 227/598 (37%), Gaps = 112/598 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++   ++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +V     Q      R  L     + D+ + E  
Sbjct: 215 ----VKLQSGDEYCRTM-------WKRLVDITMQQNQYNYAR--LNVTLTEKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           ++   PS ++D    L +QG   E  G L     +   K               GD +  
Sbjct: 261 YNPMLPSIVKD----LKKQGLAVENDGALVVYLYEFKNKD--------------GDPMGV 302

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAV 374
            + K DG + Y   D+A  K +YE    N   V                 ++   V  + 
Sbjct: 303 IVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSF 362

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S +     ++L       +DG P K   R G  + L  ++DE                  
Sbjct: 363 SLEHKNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSN 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 DEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                   D +       P   + D  E  L + L ++   ++       P+ L  YLY+
Sbjct: 474 T-------DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYE 525

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA +F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 526 LAGIFSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|319776477|ref|YP_004138965.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123983|ref|ZP_08252530.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317451068|emb|CBY87301.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327467408|gb|EGF12906.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 577

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  +  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIIAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L    +    Q  + ++ +L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270
              F E+    +VK    D   + M K + D     N QH     ++ ++E D   G+  
Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260

Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +P +  I+++L +QG   E  G L     +   K               G+ +   + K
Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GNPMGVIVQK 306

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378
            DG + Y   D+A  K +YE    N   V                 ++   V  + S + 
Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               ++L       +DG P K   R G  + L  ++DE                      
Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERSTVLINEKNTNLSNDEKE 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIKAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +
Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577


>gi|313887918|ref|ZP_07821597.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846084|gb|EFR33466.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 569

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 155/621 (24%), Positives = 268/621 (43%), Gaps = 110/621 (17%)

Query: 15  LKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
           +K +D KI+ ++ K +D++ IE P +   G  +      L++    +P  IAE +  +I 
Sbjct: 9   IKILDEKIEGLDAKEIDKM-IEVPPNYELGDFAF-PVFSLAKIYRKNPAMIAEELAGQI- 65

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            D            ++N Y++ S L  +IL   V     +G+   G+   V +E+ S N 
Sbjct: 66  -DSKYFEKVENKNAYLNFYINKSILVEEILREAVDRKENFGKTNYGENKNVIVEYSSTNI 124

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYN 191
             P H+GH R  V+GD+L  +  F G+      ++ D G Q   L  +   W  + A+ N
Sbjct: 125 AKPFHIGHIRSTVIGDSLKRIYDFLGFNTIAINHLGDYGTQFGMLIYAYKTWGSKAAIEN 184

Query: 192 NDSDLPEGYYPGVYLKHVG--------KELADKYSSELLNF-PE--EKWLPIVKDYSVQA 240
           +    P      +Y+K  G        K+    +  EL N  PE  E W    K+ S++ 
Sbjct: 185 D----PINELLKLYVKVNGVCEEDESVKDECRYWFKELENGNPEAVEIW-QWFKEVSLKE 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             ++       L+I  D +  E  +    P  I ++     R+  V E      +S+  +
Sbjct: 240 FNRV----YDMLDIHFDSYNGESFYSDKMPGLIEEL-----REKKVLE------ESQGAE 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYV 355
             ++D             + D P   ++KSDG+  Y   DLA  K ++E  + + N IYV
Sbjct: 285 VINLD-------------EFDLPPAIVVKSDGTTIYLTRDLAAAKYRHETYKPYKN-IYV 330

Query: 356 MGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +GS  S +  +L+ A+  A  +   +I  +   +V L  DG    +S R G  + L  V+
Sbjct: 331 VGSQQSLHFNQLKSALKKAGYDWYDEIVHVPFGMVSL-EDGT---LSTRRGKVVYLEDVL 386

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++                             VG  +++F  L+  N  + D+ F   K  
Sbjct: 387 NKATDKVREILDAREEEQGQKIENKEELAQAVGIGAIKFQELF--NGRIKDYTFNWDKTL 444

Query: 446 SKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           S E     YVQY +AR  S+ ++        DFD+   N I      + SE+ +I  L  
Sbjct: 445 SFEGETGPYVQYVHARICSLLKKG-------DFDI--NNEIDPSLLTEESEINIIRSLYN 495

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V+ +A    EPY +  Y  +LA  F+  ++  +       +  ++ KL   RL L +
Sbjct: 496 FTDVVVDACEKYEPYFITRYTVELAKNFNKFYNQTQ-------ILVDDEKLKNTRLMLCY 548

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV ++I SGLN++G+++P +M
Sbjct: 549 AVKNVIASGLNLLGIKAPEKM 569


>gi|261400736|ref|ZP_05986861.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209505|gb|EEZ75960.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 572

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 126/589 (21%), Positives = 244/589 (41%), Gaps = 86/589 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378
           + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +        + K
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAK 362

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           A+    +     + +DG P K   R+GD + L  ++ E                      
Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAA 417

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A   
Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++
Sbjct: 475 ----EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           F   +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 526 FSRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|332365456|gb|EGJ43217.1| arginine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 562

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I   I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQAIAAYIAENIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G G  V I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNGENVTIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDDEGRLWFKKLEDGDPEATELWQWFRDESLMEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|50403850|gb|AAT76680.1| arginyl-tRNA synthetase 2 [Oenococcus oeni]
          Length = 532

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 248/576 (43%), Gaps = 96/576 (16%)

Query: 53  LSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           LS+   L P  +A  I  R+ K D + + +   G  +IN +L        L S +++   
Sbjct: 10  LSKFFHLSPDQVAFSIYNRLNKSDTNFEKIEHNG-AYINFFLDRKREASTLISDIINNDS 68

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG+N  G    + +E  S N   PM +GH R  ++G++L+ +   +GY+  +  ++ D G
Sbjct: 69  YGKNNAGNKKTIIVELSSPNIAKPMSMGHLRSTMIGESLSRIANENGYKTIKINHLGDWG 128

Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF----P 225
            Q   +  +   W  +  +  N  D     Y  +  +     EL++   S         P
Sbjct: 129 TQFGLMIEAYKLWGNKDIIEQNPVDELVKLYVRINKEAETNPELSEAGRSWFKKLEDGDP 188

Query: 226 EE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           E     KW    K+ S++   K+     + L +  D    E  F++   S I D++ N  
Sbjct: 189 EARELWKWF---KNVSLREFNKV----YQRLGVTFDSMNGES-FYQDKMSVIIDLLKN-- 238

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-- 339
                 +GIL   +S+  Q  D+      +   +        +L+SDG+  Y   DLA  
Sbjct: 239 ------KGILT--ESRGAQIVDLPSLLPAYNLPV------SIILRSDGATQYATRDLATA 284

Query: 340 -YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
            Y +  Y   FD  +YV+G++   Y K+++A+      K A  N    ++  +Y   +  
Sbjct: 285 FYRQTTYH--FDKCLYVVGAEQKEYFKQIKAIL-----KLAGFN-WSDDMEHIYFGLITF 336

Query: 399 ---KMSKRAGDFITLRHVVD-------------------------EVGSDSVRFMMLWRK 430
              KMS R G+ + L  V+D                         +VG+ +V F  L   
Sbjct: 337 NGKKMSTRKGNVVKLEQVLDSAHKLAKNQIAEKNPNLSNSDKVAEQVGTGAVIFNDLMND 396

Query: 431 NSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
            +  +DFD  + VK +    P  YVQY + R  SI R++  I  D++  +          
Sbjct: 397 RTLSIDFDLDQIVKFEGDTGP--YVQYTHVRAVSILRKSS-IKIDINDAI---------K 444

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             D     ++  L+ YP +++ A I +EP  +A YL +LA  F+ ++S          + 
Sbjct: 445 LLDNDSWAVVSKLSVYPDIVKRAWILREPSIIAKYLLNLAHEFNSYYSKVH-------IL 497

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +++L+  RL LV AVA ++  GL ++ V++P++M
Sbjct: 498 VEDKQLS-SRLALVDAVAIVLKKGLELLDVQAPDQM 532


>gi|167855456|ref|ZP_02478221.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755]
 gi|167853450|gb|EDS24699.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755]
          Length = 575

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 233/580 (40%), Gaps = 78/580 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ +V  + ++   + + IAG GFIN++L+P++L +  
Sbjct: 37  GDYQANGIMGAAKKLGLNPREFAQKVVDNVDLNGIAEKLEIAGPGFINIFLAPTWLAQQT 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +   SG + G NL  +   V +++ S N    MHVGH R  ++GD++  ++ F G +V 
Sbjct: 97  EN-AFSGDKLGINL-NQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRVLEFLGNKVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRTAKEHYDSDEVFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWL-------------PIVKDYSVQAMMKIIRDDLKA 251
                G +       +L+N   ++                ++ +     M+  I  DLKA
Sbjct: 215 VKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESLYNPMLPEIVADLKA 274

Query: 252 --LNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             L ++ D  + +  D+F   D  P+  I+      G++Y            +    DR 
Sbjct: 275 QGLAVEDDGALVVFLDEFKNKDGDPMGVIVQK-KDGGFLYTTTDIAAAKYRFETLKADRA 333

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L+F  T     + +  L +  +         Y    +     N   ++G D   +  R 
Sbjct: 334 -LVFSDTRQSQHMQQAWLITRKA--------GYVPDSFSLEHHNFGMMLGKDGKPFKTRT 384

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--RHVVDEVGSDSVRFM 425
                          V L +L+    +     ++++  D      + VV+ V   +V++ 
Sbjct: 385 GGT------------VKLADLLDEAVERAEKLIAEKNPDLTACEKQAVVEAVAIGAVKYS 432

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +    N++
Sbjct: 433 DLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRVRSIFSRA-----GIDPNSLTANIV 486

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 D  E  L + L ++   +        P+ L  YLY+LA +F   +      P L
Sbjct: 487 L----IDEKERNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFY---EACPIL 539

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++    +   RL+L H  A  +  GL+++G+++  +M
Sbjct: 540 NAEES----IKQSRLKLAHLTAKTLKQGLDLLGIKTVEKM 575


>gi|333025212|ref|ZP_08453276.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745064|gb|EGJ75505.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 597

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 135/589 (22%), Positives = 235/589 (39%), Gaps = 84/589 (14%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
            N  + L++    +P  +A  +VA +     +  V ++G GF+N+ +S   L + L++  
Sbjct: 43  ANGVLALAKKAKANPRELATRVVAALPDSTVIKDVEVSGPGFLNITVSDEALVRNLAARA 102

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+G  V R ++
Sbjct: 103 AAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFTGETVIRRHH 162

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           I D G Q   L   +     +   ++DS           + ++ +     Y +    F E
Sbjct: 163 IGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEAAMSNLNR----VYKASKALFDE 218

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIRDIIDNL 280
           ++     KD + + ++ +   D + L   H  F+ E        F + D   IRD  D +
Sbjct: 219 DEGF---KDRARRRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IRD-ADIV 272

Query: 281 ARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP--------LLKS 327
              GY              + CD +++  +  RS     +  DDV  P        + KS
Sbjct: 273 GESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVRKS 323

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
           +G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V L
Sbjct: 324 NGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAVQL 383

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
                L  DG P K   RAG+ + L  ++DE                             
Sbjct: 384 AFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERGAQ 441

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A D      
Sbjct: 442 VGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSGA--- 497

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++   +
Sbjct: 498 ----PAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTTFY 553

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                         N  ++   RL L       + +GL ++G+ +P  +
Sbjct: 554 DQCHV-----LSDDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAPKSL 597


>gi|326778607|ref|ZP_08237872.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658940|gb|EGE43786.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 590

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 236/592 (39%), Gaps = 93/592 (15%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  + A +     +  + ++G GF+N+ L+   + + L++
Sbjct: 41  FQANGILALAKKLKGNPRELAAQVTAALPAGGLIKDIEVSGPGFLNVTLTDRAIVETLAA 100

Query: 105 IVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
               G    G  L        I++   N    MHVGH R AV+GD +  ++ F+G  V R
Sbjct: 101 RAADGEGRLGVPLKDDAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTGENVVR 160

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
            ++I D G Q   L +     +  AL  ++    +G      L  V KE     S  L +
Sbjct: 161 RHHIGDWGTQFGML-IQYLIEHPGAL-QHEGGPGDGEAAMSTLNRVYKE-----SRALFD 213

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-----------DFHRGDP-- 270
             EE      K  S   ++ +   D   L + H  F+ E            D    DP  
Sbjct: 214 SDEE-----FKARSRDRVVALQAGDPGTLELWHR-FVDESKIYFHSVFDKLDMEIRDPDI 267

Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL- 325
              S   D+++   R       IL     +T      +    +F   + G D +R PL+ 
Sbjct: 268 VGESGYNDMLEETCR-------IL----EETGVAVRSEGALCVFFDDVKGPDGNRVPLIV 316

Query: 326 -KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN- 382
            K++G Y Y A DL+  + + +    D ++YV+ +  S + + +   A         +  
Sbjct: 317 KKTNGGYGYAATDLSAVRNRVQDLKADTLLYVVDARQSLHFRMVFETARRAGWLGDDVKA 376

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V L     L +DG P K   R G+ + L  ++DE                          
Sbjct: 377 VQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEAVQRATAVVRDKAEKVGLSEEEIVEN 434

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L         FD  ++     +  V Y+QYAYAR RSI R+A D  P
Sbjct: 435 GRYVGIGAVKYADLSTSAVRDYKFDLDQMVALHGDTSV-YLQYAYARIRSILRKAGDAVP 493

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                         E E   +E  L +HL ++  V+       EP+KLA YLY LAS   
Sbjct: 494 ----------AAHPELELAPAERALGLHLDQFGEVLAEVGEGYEPHKLAAYLYQLAS--- 540

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            H +   +  ++     N  ++   RL LV   A  ++ G+ ++G+ +P  +
Sbjct: 541 -HLTTFYDQCQV-LSPDNAPEVVENRLFLVELTARTLHRGMALLGIRTPERL 590


>gi|251792745|ref|YP_003007471.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534138|gb|ACS97384.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 577

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 138/601 (22%), Positives = 235/601 (39%), Gaps = 118/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG++P   A+L++A+ ++    +   IAG GFIN++L   +L + +
Sbjct: 37  GDYQANGIMPAAKKLGINPREFAQLVLAKAELQDITEKTEIAGPGFINIFLKDGWLAENI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  V   + G +   K T V +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 97  GN-AVKDPKLGIHHQDKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +VK       M+  + +   LN+       +D 
Sbjct: 215 ----VKLQSGDEYCRTM-------WQKLVK-----ITMQQNQHNYDRLNV---TLTEKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
                 +P +  I+++L +QG   E        L   K+K                   G
Sbjct: 256 MGESLYNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKD------------------G 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG----SDH--SGYVKRLEAVA 371
             +   + K DG + Y   D+A  K +YE    N   V      S H    ++   +A  
Sbjct: 298 GSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGY 357

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
           A  S +    N  +     L +DG P K   R+GD + L  ++DE               
Sbjct: 358 APDSFQLEHKNFGMM----LGKDGKPFKT--RSGDTVKLADLLDEAIERAGVLISQKSTA 411

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  SV++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSDQEKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLS-FEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +++    +++          Q S  D  E  L + L ++   I+       P+ L  Y
Sbjct: 471 FNRSQIALSEVE--------QAQLSITDEKERALAIKLLQFEEAIQIVAKDGTPHVLCTY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY+LA VF   + H         +   ++++ + RL+L       +  GL ++G+++  +
Sbjct: 523 LYELAGVFSSFYEH------CPILNNEDQQVKLSRLKLALLTERTLKQGLGLLGIKTVEK 576

Query: 585 M 585
           M
Sbjct: 577 M 577


>gi|237741537|ref|ZP_04572018.1| arginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429185|gb|EEO39397.1| arginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 569

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 247/582 (42%), Gaps = 90/582 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKNNFPCGDVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G  Y  + + +  KV I+F S N    MH+GH R  ++G+ +  +  F GY+V 
Sbjct: 96  NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMGDVVK 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D                     +    D K  LF            + K DG+Y Y 
Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-I 485
           L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+     +N+ I
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN-----KNIEI 479

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L
Sbjct: 480 KTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL 533

Query: 546 RFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                 N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 ------NQDIETLKSRTLLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|333029612|ref|ZP_08457673.1| Arginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740209|gb|EGJ70691.1| Arginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 597

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 138/609 (22%), Positives = 269/609 (44%), Gaps = 92/609 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ +   +K +  + S F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTVVVFPFL-RMSRKAPEATAQELGEYLKANEPIISNFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++PS   ++L+ I      YG   +G+ +K V IE+ S N   P+H+GH R  ++G +
Sbjct: 86  LIIAPSCWVELLNDIHADA-HYGIKEVGEDSKLVMIEYSSPNTNKPLHLGHVRNNLLGHS 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYL 206
           L+ +MA +G +V +   +ND G  I  + LA + + + +         D   G Y   + 
Sbjct: 145 LSKIMAANGNKVVKTNIVNDRGIHICKSMLAWAKYGKGETPESSGKKGDHLVGDYYVAFD 204

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISE 262
           KH   ELA+  S  + +   E    ++K+ + + ++K   +D  ++AL   +   ++   
Sbjct: 205 KHYKAELAELKSKGMSDEEAEASSVLMKE-AREMLVKWEANDPEVRALWNKMNGWVYTGF 263

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR---KQLLFR------- 312
           D+ ++              R G  ++ I     +    K  +D    K L F+       
Sbjct: 264 DETYK--------------RLGVSFDKIYYESDTYLEGKEKVDEGLAKGLFFKKEDGSVW 309

Query: 313 STMVGDDVDRP-LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK----R 366
           + +  + +D+  LL++DG+  Y   D+   K ++ +   D MIYV+G++ + + +     
Sbjct: 310 ADLTKEGLDQKLLLRADGTSVYMTQDIGTAKMRFSDYSIDQMIYVVGNEQNYHFQVLSIL 369

Query: 367 LEAVAAAVSEKKAQINVLLCELVR---LYRDGMPIKMSKRAGDFI-----------TLRH 412
           L+ +  A  +     +  + EL       R+G  +       + I            L H
Sbjct: 370 LDKLGFAWGKDLVHFSYGMVELPEGKMKSREGTVVDADDLMDEMIDTAKETSKELGKLDH 429

Query: 413 VVDE--------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQY 456
           + DE        VG  ++++ +L    RKN      E +DF+          N   ++QY
Sbjct: 430 ISDEEANEIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQY 480

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            YAR +S+ R+AK+        + P++V    +E    E  LI  +A++  +++ A    
Sbjct: 481 TYARIQSVLRKAKEAGM-----VLPKSV-DVTTEISEKERGLIQLVADFAVIVDQAGKDY 534

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P  +A Y+Y+L   ++  +           ++  + K+ + RL L   VA  I +G+++
Sbjct: 535 SPSGIANYIYELVKEYNQFYHD------FSILREEDEKVKLFRLVLSQTVAETIKNGMDL 588

Query: 577 IGVESPNEM 585
           +G+E P+ M
Sbjct: 589 LGIEVPDRM 597


>gi|89256875|ref|YP_514237.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315254|ref|YP_763977.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503050|ref|YP_001429115.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009231|ref|ZP_02274162.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290953627|ref|ZP_06558248.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313060|ref|ZP_06803754.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|109894993|sp|Q2A215|SYR_FRATH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122324749|sp|Q0BKP4|SYR_FRATO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232787|sp|A7NDV6|SYR_FRATF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89144706|emb|CAJ80037.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130153|gb|ABI83340.1| arginine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156253653|gb|ABU62159.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 581

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 106/630 (16%)

Query: 11  LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++NYL E   K+  +    +   ++V     D   GH   N AM L++     PL IAE 
Sbjct: 3   IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G        KV ++F
Sbjct: 61  IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   +  +  Q
Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVISDVHLGDWGTQMGMLIEEIKLQSPQ 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234
            +Y +++    G YP      V +ELA+ Y          +N  E+  L   +       
Sbjct: 180 LVYFDEN--YTGEYPTESPITV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 + V+  +  ++ D  +L++  D+++ E D ++     I ++I       ++YE 
Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346
                  +     D ++            D   PL  +K DG   Y   DLA  ++   +
Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397
              D +IYV+    S + K++ +VA     VSEK        C+L  +       +DG P
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385

Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            K  +           +A ++   R        ++D++   +++F  L    +    FD 
Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495
            K  + + K  P  Y+ Y   R +SI R+   IF D  D     ++  V+   +E+   E
Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +   N        ++  L
Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L  A    +    ++IG+  P  M
Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581


>gi|296110389|ref|YP_003620770.1| arginine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831920|gb|ADG39801.1| arginine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 563

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 140/592 (23%), Positives = 244/592 (41%), Gaps = 95/592 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++     P  IA  +V   +ID +     +A   +IN +L
Sbjct: 27  LEAPKSTDLGDVAF-PTFTLAKTRHQAPQQIAAALVT--EIDQEGFEKVVATGPYINFFL 83

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
                 R  L  I+     +G +  G G  V I+  S N   PM +GH R  V+G+ LA+
Sbjct: 84  DKQVTSRHTLEKILTEQANFGSHTTGNGANVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           + A +GY   +  ++ D G Q   L       Y    + N++++     P   L     E
Sbjct: 144 ITAKNGYVPVKINHLGDWGTQFGKLI------YAYKTWGNEAEVKAD--PIATLLRYYVE 195

Query: 213 LADKYS-SELLNFPEEKWLPIVK--DYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRG 268
             +K    + LN     W   ++  D     + +  R + LK     +D    E D   G
Sbjct: 196 FHEKAQDDDSLNDEGRAWFKKLENGDQEAHKLWQWFRAESLKEFTAIYDRLDIEFDSFNG 255

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      +  ++D L+ +  +        KS+  Q  D+         + + D++   ++
Sbjct: 256 EAFYNDKMDKVVDMLSDKKLLV-------KSQGAQIVDL---------SSINDNLTPAMI 299

Query: 326 K-SDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           K SDG+  Y   DLA   Y K  Y   F   +YV+G +   +  +++AV + +    A  
Sbjct: 300 KRSDGATLYMTRDLAAAVYRKETYR--FAKSLYVVGGEQREHFVQMKAVLSLMGFDWAD- 356

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------E 416
           +V       +  +G   KMS R GD + L+ V+D                         +
Sbjct: 357 DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLDDAHDLALKQIQEKNPALKNKEVVAEQ 414

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQA--KDIFP 473
           VG+ +V F  L    +   DF+  + V+ +    P  YVQY  AR +SI R+A    I  
Sbjct: 415 VGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKADVTKIGD 472

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           DL+ +             D     +I  L  +P  ++ A   +E   +A Y   LA  F+
Sbjct: 473 DLNLN-------------DADTWDIITTLNAFPTAVQRAWQQREASIIAKYALTLARTFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++++ +       + A++ +L   RL LV +V  +++  L ++GV+SP EM
Sbjct: 520 KYYANSK-------ILADDAQLN-ARLALVESVTIVLSESLRLLGVKSPEEM 563


>gi|118497156|ref|YP_898206.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323454|ref|ZP_03057231.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208778949|ref|ZP_03246295.1| arginyl-tRNA synthetase [Francisella novicida FTG]
 gi|254372523|ref|ZP_04988012.1| arginine-tRNA ligase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373984|ref|ZP_04989466.1| arginyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|166232788|sp|A0Q5D7|SYR_FRATN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118423062|gb|ABK89452.1| arginyl-tRNA synthetase [Francisella novicida U112]
 gi|151570250|gb|EDN35904.1| arginine-tRNA ligase [Francisella novicida GA99-3549]
 gi|151571704|gb|EDN37358.1| arginyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|194322309|gb|EDX19790.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744749|gb|EDZ91047.1| arginyl-tRNA synthetase [Francisella novicida FTG]
          Length = 581

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 146/630 (23%), Positives = 260/630 (41%), Gaps = 106/630 (16%)

Query: 11  LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++NYL E   K+  +    +   ++V     D   GH   N AM L++     PL IAE 
Sbjct: 3   IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G        KV ++F
Sbjct: 61  IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   +  +  Q
Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234
            +Y +++    G YP      V +ELA+ Y          +N  E+  L   +       
Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 + V+  +  ++ D  +L++  D+++ E D ++     I ++I       ++YE 
Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346
                  +     D ++            D   PL  +K DG   Y   DLA  ++   +
Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397
              D +IYV+    S + K++ +VA     VSEK        C+L  +       +DG P
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385

Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            K  +           +A ++   R        ++D++   +++F  L    +    FD 
Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495
            K  + + K  P  Y+ Y   R +SI R+   IF D  D     ++  V+   +E+   E
Sbjct: 446 EKFAQHEGKTGP--YLLYTAVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L
Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVN------CPITNLDDESL 551

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L  A    +    ++IG+  P  M
Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581


>gi|34762844|ref|ZP_00143829.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887500|gb|EAA24585.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 569

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 247/582 (42%), Gaps = 90/582 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE I         V+ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEIKNNFSCGDVVEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G  Y  + + +  KV I+F S N    MH+GH R  ++G+ +  +  F GY+V 
Sbjct: 96  NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMGDVVK 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D                     +    D K  LF            + K DG+Y Y 
Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-I 485
           L +     + F++ K+    + N   Y+ Y YAR +SI R+  +   DL+     +N+ I
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN-----KNIEI 479

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             +++F+ S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L
Sbjct: 480 KTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL 533

Query: 546 RFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                 N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 ------NQDIETLKSRALLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|296314056|ref|ZP_06863997.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839307|gb|EFH23245.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 572

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 123/589 (20%), Positives = 241/589 (40%), Gaps = 86/589 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEVLAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLARNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263
             AD     +  L   +E  L + K +        QA+   +   L+  ++  +   ++D
Sbjct: 204 TFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLSLKLRPEDVAGESKYNDD 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                    ++ ++D+L ++G   E                D  +++F        G+  
Sbjct: 264 ---------LQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +        
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 380 QINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +          + +DG P K   R+GD + L  ++ E                      
Sbjct: 360 DVKAEFIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAG 417

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A   
Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++
Sbjct: 475 ----EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           F   +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 526 FSRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|253577326|ref|ZP_04854644.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843330|gb|EES71360.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 624

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 161/673 (23%), Positives = 268/673 (39%), Gaps = 147/673 (21%)

Query: 7   FSSRLKNYL----KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
            SS +K YL    +++  ++    + L  IVIERP    HG  STN AM L++ L   PL
Sbjct: 5   ISSWMKKYLELSVRQVLSRLGHSTEELPDIVIERPARAEHGDYSTNIAMQLAKTLRQPPL 64

Query: 63  TIAELIVARIKIDPDVDSVF----IAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117
            IA  +   ++    ++ +F     A  GF+N  L    + RK          +  R + 
Sbjct: 65  HIAAQLKNELEQTGRMEGLFHQIETAPPGFLNFRLDWNEWARK--------DFQLPRAV- 115

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV IE  S NP    H+GH R A +GD+LA L+  +GY++    YI+D G Q+   
Sbjct: 116 --REKVVIEHTSINPNKSAHIGHLRNACIGDSLARLLKRAGYQIEVHNYIDDLGNQLADT 173

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPE--EKWL 230
            + +     QA +    D     Y       V KE  D+ S     +++L   E  +  L
Sbjct: 174 VVGLLNVDHQAAHVRFGDFCWDIY-----SRVNKEYDDQPSLLEQRTKVLQALEAGDGNL 228

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--- 287
             V   + + +++   +++KA  I +D+ + E +  R       D    L +Q  ++   
Sbjct: 229 AWVGLLTAERIVREHLEEMKAFGIDYDLLVWESNIVR---QGFWDTAFRLLQQTALFHKE 285

Query: 288 -----EG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
                EG  +L  P ++  +             +      D+ L++S+G  TY A D+AY
Sbjct: 286 TSGKLEGCWVLKQPAAEDVE-------------SEAEHQADKVLVRSNGILTYTAKDIAY 332

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              K+    ++  Y   +D   +    E VAA   +    +NV+       +R   P  M
Sbjct: 333 HLWKFGLLGNDFRYKPFAD-GLWTTSAEGVAADYGKADLVVNVI------DHRQAYPQAM 385

Query: 401 SKRAGDFI-------TLRHV-----------VDEVGSDS----VRFMMLWR-----KNSE 433
            K+A + +        LRHV             E+G D+      + M  R     K S+
Sbjct: 386 VKQALEALGFTAQAEKLRHVGYGVVSLSPGAARELGLDTSDGKASYAMSGRQGIGIKVSD 445

Query: 434 LLD----------------------------------------FDFCKVKEQSKENPVFY 453
           LLD                                        FD  +  E +  N   Y
Sbjct: 446 LLDLMEAQIEAKRSDSEGLSSRLIAAAAIRYYLLRFALPTEVVFDIQQATETTG-NTGVY 504

Query: 454 VQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           + YA+AR  SI  +A+ D  P ++    P ++ PQE     +E  L+  +A +P  +  A
Sbjct: 505 LMYAHARAASILAKAQADGLPRMES--LPEDIAPQER----AEHALLRQIAAWPDTLSTA 558

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +  + Y+LA++F+  ++     P L+       +    RL L       I  
Sbjct: 559 CEELSPTPICHFAYELATLFNHFYT---ACPILK----AEPERQPYRLWLTAKFKETIAE 611

Query: 573 GLNIIGVESPNEM 585
            L++IG+ +P+ M
Sbjct: 612 ALDVIGLPAPDRM 624


>gi|331007404|ref|ZP_08330588.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418782|gb|EGG93264.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 582

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 139/605 (22%), Positives = 260/605 (42%), Gaps = 103/605 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFI 89
           +   +    G    N AM  ++     P  IA+ IV +++ + DV  +     IAG GFI
Sbjct: 28  VAASKKAGFGDYQANGAMGAAKIAKAKPRDIAQQIVDQLQQNSDVQVMISHIEIAGPGFI 87

Query: 90  NLYLSPSYLR---KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           NL L P +L    +I++     GI+       +   V +++ S N    MHVGH R +++
Sbjct: 88  NLTLDPQWLAANIRIINQDKQLGIQDD-----QPQTVVVDYSSPNLAKEMHVGHLRSSII 142

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGV 204
           GD +   + F G+ V R+ ++ D G Q   L   +  + Q+    + +  DL EG+Y   
Sbjct: 143 GDAVVRTLEFQGHNVVRQNHVGDWGTQFGMLIAELEEQLQEGESASLALKDL-EGFY--- 198

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH-------- 256
                  + + K+  E   F  +    +VK  S  A +  + +  + +++ H        
Sbjct: 199 -------QSSKKHFDESEAFANKARDYVVKLQSGDAHVLTLWEQFRRVSLTHSQEIYQQL 251

Query: 257 DIFISEDDFHRGDPSPIRD---IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++ ++ DD  RG+ +   D   ++  L +QG   E                   Q++F  
Sbjct: 252 NVTLNADDV-RGESAYNDDLAPLVAELQQQGLAVES---------------QGAQVVFLE 295

Query: 314 TMVGDDVD-RPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEA 369
            M   + +  P++  K  G + Y   DLA  + + +    D ++Y + +  S +++++  
Sbjct: 296 EMADKEGNPSPVIIQKQGGGFLYATTDLAALRYRSHTLHADRVLYFIDARQSLHMQQVFT 355

Query: 370 VAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
           +A         I++        +  DG P K   R G  + L  ++ E            
Sbjct: 356 LAKKAGFVNDNISLEHHPFGTMMGADGKPFKT--RTGGTVKLADLLVEAVERAEKVVADK 413

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYAR 460
                          VG  ++++  L +  +    F++   +  +   +P  Y+QYAYAR
Sbjct: 414 NPNLSAEERAVIARKVGIGAIKYADLSKTRTNDYIFNWETMLSFEGNTSP--YLQYAYAR 471

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            +SIFR+A     D+D       +   E     +E+ L +   ++  V+E +T    P+ 
Sbjct: 472 IQSIFRKA-----DIDVSALNSELALNEP----AEVALSIKTLQFAEVVEQSTREAYPHL 522

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YLYDLA +F   +    + P L+     + K +  RLQL  +VA+ +N GL+++G+E
Sbjct: 523 LCTYLYDLAGLFMRFY---EQCPILKDGIDEDTKNS--RLQLALSVANTLNKGLDLLGIE 577

Query: 581 SPNEM 585
           + ++M
Sbjct: 578 TMDKM 582


>gi|260776440|ref|ZP_05885335.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607663|gb|EEX33928.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 577

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 134/601 (22%), Positives = 236/601 (39%), Gaps = 118/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            S  +S    G     + T V  ++ + N    MHVGH R  ++GD +   + F G++V 
Sbjct: 97  ES-ALSDSRLGVAAEAQKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           R  +I D G Q   L                    L  F+R  + LY+ D +        
Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLYDEDEEFAVKARNY 214

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V    V  +  D+Y +E+       W  +V    +Q                     ++ 
Sbjct: 215 V----VKLQGGDEYCAEM-------WKKLVDVTMIQ---------------------NQR 242

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
           ++ R + S  R+ +   +    +  GI+   K +   + D D  Q++F        G+ +
Sbjct: 243 NYDRLNVSLTRENVMGESMYNDMLPGIVADLKEQGLAQED-DGAQVVFLEEYKNKDGEPM 301

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372
              + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   V  
Sbjct: 302 GVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V+ +     ++L       +DG P K   RAG  + L  ++DE    +++  ++  KN 
Sbjct: 362 EVTLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAIK--LIESKNP 411

Query: 433 EL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSI 464
           +L           +     K  + SK                  N   Y+QYAY R  SI
Sbjct: 412 DLETAEKQNIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASI 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A     +L  D+     I +E      E  LI  L ++   +++     +P+ +  Y
Sbjct: 472 FAKAGISMDELAGDI----QITEE-----KEKSLIAKLLQFEEAVQSVAREGQPHIMCSY 522

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA  F   +           +   +  +   RL+L    A  I  GL+++G+++   
Sbjct: 523 LFELAGQFSSFYEA------CPILNTEDESVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576

Query: 585 M 585
           M
Sbjct: 577 M 577


>gi|218768489|ref|YP_002343001.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|23822208|sp|Q9JTM7|SYR_NEIMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|121052497|emb|CAM08836.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 572

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDATAPTVLSE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|116618315|ref|YP_818686.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271485|sp|Q03WV9|SYR_LEUMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116097162|gb|ABJ62313.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 563

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 141/594 (23%), Positives = 245/594 (41%), Gaps = 99/594 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IVA   ID +     +A   ++N +L
Sbjct: 27  LEAPKSSDLGDVAF-PTFTLAKTLHKAPQLIAADIVA--AIDQEGFEKVVATGPYVNFFL 83

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              +   ++L ++      YG N+ G+G KV I+  S N   PM +GH R  V+G+ LA+
Sbjct: 84  DKVATSNQVLKTVFDLEGAYGDNVDGQGAKVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           + A +GY   +  ++ D G Q   L  +   W  ++ + ++       YY  V      K
Sbjct: 144 ITAKNGYAPVKINHLGDWGTQFGKLIYAYKAWGSEEEVKSDPIATLLKYY--VEFHEKAK 201

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA----------MMKIIRDDLKALNIQHDIFIS 261
           E      ++ LN     W   ++D   +A           +K   +    L+I  D F  
Sbjct: 202 E------NDSLNDEGRAWFKKLEDGDEEAHRLWQWFRAESLKEFSEIYDRLDITFDSFNG 255

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++      +  ++D L  +  + E       S+  Q  D+          M+     
Sbjct: 256 EAFYN----DKMDKVVDLLEEKNLLVE-------SQGAQIVDLSHINPNLTPAMIK---- 300

Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EK 377
               +SDG+  Y   DLA   Y K  Y+  F   +YV+G +   +  +++AV + +  E 
Sbjct: 301 ----RSDGATLYMTRDLAAALYRKETYD--FAKSLYVVGGEQREHFVQMKAVLSLMGFEW 354

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------- 415
              I  +   L+    +G   KMS R GD + L+ V+D                      
Sbjct: 355 SDDIEHIAFGLITF--NGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPDLGDKDT 410

Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              EVG+ +V F  L    +   DF+  +V + +    P  YVQY  AR +SI R+    
Sbjct: 411 VAEEVGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKTSVQ 468

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D +L            D +   +I  L  +P+ ++ A   +E   +A Y  +L+  
Sbjct: 469 LTSDDLNLT-----------DPATWDIITTLNNFPKTVQRAWQQREASIIAKYALNLSRA 517

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ ++++ +       VQ N       RL LV +V+ ++   L ++GV++P EM
Sbjct: 518 FNKYYANSK--ILTEDVQLN------ARLVLVKSVSIVLTESLRLLGVKAPEEM 563


>gi|311029544|ref|ZP_07707634.1| arginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 561

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 258/601 (42%), Gaps = 103/601 (17%)

Query: 29  LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           LD+I  ++E+P+   HG LS     +        PL  A+ I  +++ +  ++     G 
Sbjct: 20  LDKITQLLEKPKHAQHGDLSFPCFELAKMKRTAPPLLAAD-IATQLR-NAMIEKTEAVGP 77

Query: 87  GFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            ++N++     +++ +  I++   E YG   +     + ++  S N   P  +GH R  V
Sbjct: 78  -YVNIFFRKDMIQQKVVYIILKEKENYGTIHLKNKETIVLDLSSPNIAKPFSMGHLRSTV 136

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGV 204
           +G+ +A+++  SG+E  R  Y+ D G Q   L A  + W  ++ +  N   +PE      
Sbjct: 137 IGNAIANILEKSGFETVRINYLGDWGTQFGKLIAAYLKWGKEEKIRRN--PIPE------ 188

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFIS 261
            LK   K   +   +  LN    +W   +++ + +A  + K  R++ LK  N  + +   
Sbjct: 189 LLKLYVKFHEEAAVNTDLNDEGRRWFKQLEEGNEEAVSLWKWFREESLKEFNKIYALLGV 248

Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
             D ++G+      +  ++  L  Q  + E       S   Q  ++D   L         
Sbjct: 249 TFDSYQGEAFYNDKMDQVVQMLEEQDLLKE-------SDGAQVVELDDPSL--------- 292

Query: 319 DVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL-EAVAA 372
               P L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G + S + +++ E +  
Sbjct: 293 ---PPCLIKKSDGATLYATRDLAAALYRKKVYQ--FSKALYVVGQEQSIHFQQVKEVLKK 347

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
           A  +  A+++ +   L  L +DG   KMS R G  + L  V+ E                
Sbjct: 348 ANFDWAAEMHHIPFGL--LLKDGK--KMSTRKGKVVLLEEVLKEAIQLAERNIESKNPDL 403

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                    VG  +V F  L  KN  +   +F     +K + +  P  YVQY YAR  SI
Sbjct: 404 PDKEEVARQVGVGAVIFHDL--KNYRVNSVEFSLEDMLKFEGETGP--YVQYTYARANSI 459

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            ++ K     +D  L            D    +L   L EYP VI N+ +A +P  +A +
Sbjct: 460 LKKGKWTGEVIDKGL-----------GDNYSWELTKLLQEYPEVIANSNMAYDPSLVAKH 508

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + D+   F+  + +      ++F++ +  K    RL LV A A +I   L ++G+++P E
Sbjct: 509 IVDVCQAFNSWYGN------VKFLEEDAEK--GARLALVSATAIVIKESLRLLGIQAPQE 560

Query: 585 M 585
           M
Sbjct: 561 M 561


>gi|254786912|ref|YP_003074341.1| arginyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511658|sp|C5BNG6|SYR_TERTT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|237687266|gb|ACR14530.1| arginine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 578

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 246/586 (41%), Gaps = 121/586 (20%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ IV  + +    + V IAG GFIN++L  ++L + L+    S          +
Sbjct: 54  NPRELAQSIVDSLDLSGVAEKVEIAGPGFINIHLENAWLARQLAE-SSSTANLAAQTEQE 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V +++ S N    MHVGH R  ++GD LA ++ F+G +V R+ ++ D G Q   L  
Sbjct: 113 AQTVVVDYSSPNLAKEMHVGHLRSTIIGDCLARILEFNGDKVIRQNHVGDWGTQFGMLIA 172

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-VKDYSV 238
            +           ++ L +G  P   L    K+L   Y     +F  +       +DY V
Sbjct: 173 EL-----------ETQLSDGDKPDFAL----KDLESFYQKAKAHFDTDAAFATKARDYVV 217

Query: 239 ------QAMMKIIRDDLKALNIQH--------DIFISEDDFHRGDPSPIRD---IIDNLA 281
                 Q ++ +  +  K ++++H        ++ +   D  RG+ +   D   ++  L 
Sbjct: 218 RLQSGDQHILNLW-ESFKRVSLKHSEEIYSLLNVTLGPQDV-RGESAYNDDLAAVVSELK 275

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLL--KSDGSYTYFAADL 338
            QG   E                D  Q++F   +   + D  P++  K DG Y Y   DL
Sbjct: 276 AQGLAVED---------------DGAQVVFLQELADKNGDPSPVIVQKKDGGYLYSTTDL 320

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR---- 393
           A  + +  E   D ++Y + +  S +++++  VA     +KA     + E V L      
Sbjct: 321 AALRYRTGELAADRILYFIDARQSLHMQQVFTVA-----RKAN---FVNEWVSLEHHPFG 372

Query: 394 -----DGMPIKMSKRAGDFITLRHVVDE--------------------------VGSDSV 422
                DG P K   R+G  + L  +++E                          VG  ++
Sbjct: 373 TMMGADGKPFKT--RSGGTVKLAELLEEAVERASQVVAANSELDAQEAADIARKVGIGAI 430

Query: 423 RFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++  L   R N  + ++D   +  +    P  Y+QYAY R +SIFR+A     DLD + F
Sbjct: 431 KYADLSKTRTNDYVFNWD-AMLSFEGNTGP--YLQYAYTRIKSIFRKA-----DLDLESF 482

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             ++    + ++  E  L +   ++  V+E       P+ L  YLYDL+S+F   +    
Sbjct: 483 AADL----NIYEAQEKALALKTLQFAEVVEQVASEALPHVLCNYLYDLSSLFMTFY---E 535

Query: 541 ENPRLRF-VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P L+  V  + R     RL L  +VA  +  GL+++G+E    M
Sbjct: 536 ACPILKSDVPEDTRN---SRLVLSASVAKTLALGLDLLGIEVMERM 578


>gi|313668110|ref|YP_004048394.1| arginyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005572|emb|CBN87008.1| arginyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 572

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/592 (21%), Positives = 244/592 (41%), Gaps = 92/592 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G +   K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLARNIQT-ALNDARFGVSKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263
             AD     +  L   +E  L + K +        QA+   +   L+  ++  +   ++D
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGESKYNDD 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                    ++ ++D+L ++G   E                D  +++F        G+  
Sbjct: 264 ---------LQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375
              + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +        
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
           + KA+    +     + +DG P K   R+GD + L  ++ E                   
Sbjct: 360 DAKAE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAD 414

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A
Sbjct: 415 EAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKA 473

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                   +D     V+ +       E QL   L ++  V+++      P+ LA YLY +
Sbjct: 474 G------KWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQI 522

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           A++F   +      P L+   A        RLQL       +  GL+++G++
Sbjct: 523 ATLFSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|238062127|ref|ZP_04606836.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883938|gb|EEP72766.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 572

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 147/604 (24%), Positives = 238/604 (39%), Gaps = 115/604 (19%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H    ++AA+ L+R LG  P  IA  I+ + ++     +V ++G GFINL ++   
Sbjct: 28  RRSQHADYQSDAALSLARRLGRPPRDIATEILGQAELADLCSAVEVSGPGFINLTVADPA 87

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L  +LS + V     G  +      V +++ + N    MHVGH R  V+GD    L+ + 
Sbjct: 88  LGALLSPMAVDA-RLGVAVSAAPQTVVVDYSAPNVAKEMHVGHLRSTVIGDAAVRLLEWL 146

Query: 158 GYEVTREYYINDAGAQINTL--------------ALSV-----FWRYQQALYNNDSDLPE 198
           G+ V +  ++ D G     L               LSV     F++  +  ++ D    E
Sbjct: 147 GHRVIKANHLGDWGTPFGMLIEHLLDLGESEAAHELSVGDLDSFYKAARVKFDADDAFKE 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G EL  +    LL    EK+   V D                   Q  +
Sbjct: 207 RARRRVVALQGGDELTLRL-WRLLVAESEKYFLTVYD-------------------QLGV 246

Query: 259 FISEDDFHRGDP------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            ++E DF+ G+       +P+ D +D L        G+L   +      C       +F 
Sbjct: 247 LLTEQDFY-GESYYNDMLAPVTDELDRL--------GLL---RDSGDAAC-------VFP 287

Query: 313 STMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367
               G D  +PL     K DG Y Y A DLA  + +    G   ++YV+G     + + +
Sbjct: 288 EGFTGRD-GQPLPIIVRKRDGGYGYGATDLAAIRHRTRNLGATRLLYVVGLPQRQHFEMV 346

Query: 368 EAVA--------AAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFIT--------- 409
            AVA         AV+E     ++L  +   L  R G  IK+     + +T         
Sbjct: 347 YAVARQAGWLSPPAVAEHIGFGSILGSDGKMLRSRAGGSIKLVGLLDEAVTRAAELARQK 406

Query: 410 --------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                   +  V   VG  ++++  L     +   FD+ ++      N   Y+QYA+AR 
Sbjct: 407 NPDLPEAAIADVARAVGIGAIKYADLSTDRIKDYVFDWQRMLSLDG-NTAPYLQYAHARI 465

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           RSIFR+A             +      S    +E  L + L  +  V+       E ++L
Sbjct: 466 RSIFRRAG----------LGQITAASISIAHPAEHALALELVNFGTVVTGVEQTLEFHRL 515

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A YL+ LA+ F G + H    P LR       ++   RL L    A I++ GL ++G+ +
Sbjct: 516 AGYLHTLAATFSGFYEH---CPVLR----AEGEVRASRLALCDLTARILHRGLYLLGIAT 568

Query: 582 PNEM 585
           P  M
Sbjct: 569 PERM 572


>gi|239942144|ref|ZP_04694081.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239988607|ref|ZP_04709271.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291445591|ref|ZP_06584981.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348538|gb|EFE75442.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 590

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 139/593 (23%), Positives = 238/593 (40%), Gaps = 99/593 (16%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
            N  + L++ L  +P  +A  + A +     +  + ++G GF+N+ L+    R I+ ++ 
Sbjct: 43  ANGILALAKKLKGNPRELAGQVTAALPAGELIKGIEVSGPGFLNITLTD---RAIVETLA 99

Query: 107 VSGIE----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +     G  +     K  I++   N    MHVGH R AV+GD +  ++ F+G +V 
Sbjct: 100 ARAADDEGRLGVPVAADAGKTVIDYAQPNVAKEMHVGHLRSAVIGDAMVRILEFTGEDVV 159

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R ++I D G Q   L +     +  AL  ++ D  +G      L  V K      S  L 
Sbjct: 160 RRHHIGDWGTQFGML-IQYLIEHPGAL-KHEGDASDGEAAMSTLNRVYKA-----SRALF 212

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-----------DFHRGDP- 270
           +  EE      K  S   ++ +   D + L +    F+ E            D    DP 
Sbjct: 213 DSDEE-----FKARSRDRVVALQAGDRETLELWQG-FVDESKIYFHSVFDKLDMEVRDPD 266

Query: 271 ----SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL 325
               S   D+++   R       IL     +T      +    +F   + G D ++ PL+
Sbjct: 267 IVGESGYNDMLEETCR-------IL----EETGVAVRSEGALCVFFDDVKGPDGNKVPLI 315

Query: 326 --KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
             K++G Y Y A DL+  + + +    D ++YV+ +  S + K +   A         + 
Sbjct: 316 VKKTNGGYGYAATDLSAIRNRVQDLKADTLLYVVDARQSLHFKMVFETARRAGWLNEDVK 375

Query: 383 -VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
            V L     L +DG P K   R G+ + L  ++DE                         
Sbjct: 376 AVQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEAVDRATAVVREKAEKVGLSEDEIVG 433

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L         FD  ++   + +  V Y+QYAYAR +SI R+A D  
Sbjct: 434 NGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGDAV 492

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           P    +L    + P       +E  L +HL ++  V+       EP+KLA YLY LAS  
Sbjct: 493 PAAHPEL---TLAP-------AERALGLHLDQFGEVLAEVAAGYEPHKLAAYLYQLASHL 542

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   +          N  ++   RL LV   A  ++ G+ ++G+ +P  +
Sbjct: 543 TTFYDQCQ-----VLSPDNAPEVVENRLFLVELTARTLHQGMALLGIRTPERL 590


>gi|325136599|gb|EGC59200.1| arginyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 572

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDMAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDATAPTVLSE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|330444190|ref|YP_004377176.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807300|gb|AEB41473.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 564

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 233/580 (40%), Gaps = 99/580 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P +IAE IV+ +      DS+ IAG GFIN   S  +L + L
Sbjct: 39  GHYQCNDAMKLARVLKQAPRSIAEAIVSHLPHKEFFDSIEIAGAGFINFTFSSKFLTERL 98

Query: 103 ---SSIVVSG--IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              SS + SG  +E+ +N++       I+F S N    MHVGH R  ++G+ LA ++++ 
Sbjct: 99  NSFSSTLASGLRVEHPQNIV-------IDFSSPNIAKDMHVGHLRSTIIGECLARILSYV 151

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G  V R  +I D G     L   +    ++A  +N  DL E Y      K   K  A+  
Sbjct: 152 GNSVLRLNHIGDWGTAFGMLIAFIEESPEEANLDNLKDLTELY------KRAHKRFAE-- 203

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI 276
                   EE +    K  + Q ++ +   + +AL +   I  ISE  F +     I DI
Sbjct: 204 --------EEAF----KKRAQQRVVALQAQEPQALALWKKICEISEKAFQQ-----IYDI 246

Query: 277 ID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV------GDDVDRPLLKSDG 329
           +D  L ++G   E    P   +  Q  D++ K L+  S         G  +   + KSDG
Sbjct: 247 LDITLEKRG---ESFYNPFLPEVIQ--DLESKHLITLSDKAKCVFHEGFSIPFMVQKSDG 301

Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            Y Y   DLA  + + E    + +I V     S + + LEA A A       +   +   
Sbjct: 302 GYNYATTDLAAMRYRVEHDHAEKIIIVTDLGQSLHFQLLEATAIAAGYLHPGMFSHVG-- 359

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421
             L  D    K   R+G+ I L+ ++D                            +G ++
Sbjct: 360 FGLVLDAEGKKFKTRSGENIKLQELLDTAIEKAREALLSHRPEVTETELEELAPIIGINA 419

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L         F F K+  +   N   ++ YAY R + I R+           L  
Sbjct: 420 IKYADLSSHRVSDYIFSFEKML-RFDGNTAMFLLYAYVRIQGIKRR---------LHLQE 469

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            ++    S  D +E  L + L  +P  ++       P+ L  YLY L   F         
Sbjct: 470 LSLSGPLSLQDPAEEALALSLLRFPEALQLTIKELCPHFLTEYLYTLTQKF--------- 520

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           N   R        L   RL L      ++ +G++++G+ +
Sbjct: 521 NRFFRDCHIEGSPLESERLTLCALTEKVLATGMHLLGLRT 560


>gi|328676625|gb|AEB27495.1| Arginyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 581

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 146/630 (23%), Positives = 260/630 (41%), Gaps = 106/630 (16%)

Query: 11  LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           ++NYL E   K+  +    +   ++V     D   GH   N AM L++     PL IAE 
Sbjct: 3   IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G        KV ++F
Sbjct: 61  IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   +  +  Q
Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234
            +Y +++    G YP      V +ELA+ Y          +N  E+  L   +       
Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 + V+  +  ++ D  +L++  D+++ E D ++     I ++I       ++YE 
Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346
                  +     D ++            D   PL  +K DG   Y   DLA  ++   +
Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397
              D +IYV+    S + K++ +VA     VSEK        C+L  +       +DG P
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385

Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            K  +           +A ++   R        ++D++   +++F  L    +    FD 
Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495
            K  + + K  P  Y+ Y   R +SI R+   IF D  D     ++  V+   +E+   E
Sbjct: 446 EKFAQHEGKTGP--YLLYTAVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L
Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVN------CPITNLDDESL 551

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L  A    +    ++IG+  P  M
Sbjct: 552 KKARIALCMATVKSMTIASDLIGISIPERM 581


>gi|328957660|ref|YP_004375046.1| arginine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673984|gb|AEB30030.1| arginine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 564

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 255/601 (42%), Gaps = 111/601 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +   +   P V+ + + G  ++N +
Sbjct: 27  LLENPKSAEHGDIAF-PAFALAKAFRKAPQQIATDLGETVN-SPIVEKIEVVGP-YLNFF 83

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+   +   +L  I+  G  YG   IG    V I+  S N   P+ +GH R  V+G++LA
Sbjct: 84  LNKKEVSSAVLKEILEKGPHYGDAEIGGNRNVPIDMSSPNIAKPISMGHLRSTVIGNSLA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +++   G+   +  ++ D G Q   L +    W  ++A+ N+         P V L    
Sbjct: 144 NILTKVGFNPIKINHLGDWGTQFGKLIVGYKLWGSEEAVKND---------PIVELLR-- 192

Query: 211 KELADKYSSELLNFPE-----EKWLPIVK--DYSVQAMMKIIRDD-LKALN-------IQ 255
             L  K+  E    PE      +W   ++  D   Q + K  R++ LK  N       I 
Sbjct: 193 --LYVKFHEEAEEKPELDDEAREWFKKLEDGDQEAQRLWKWFREESLKEFNHVYERLDIT 250

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D F  E  F+      + D+++         + +L      T    D+++  L      
Sbjct: 251 FDSFDGE-AFYNDKMQEVMDLLEE--------KNVLSVNDGATI--VDLEKYNL------ 293

Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                  P L  KSDG+  Y   DLA   Y K  Y+  F   +Y +G++ S + K+L+AV
Sbjct: 294 ------NPALIKKSDGATLYITRDLAAAIYRKRTYD--FAMSLYAVGNEQSHHFKQLKAV 345

Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K +I VLL E++         ++ ++  D 
Sbjct: 346 LKEMGYDWADDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLDDAVASALEQIEEKNTDL 404

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                + D+VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI
Sbjct: 405 PNKEIIADQVGIGAVVFHDL--KNDRLNNFDFTIEEVVRFEGETGP--YVQYTRARAMSI 460

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R++     D   D +P +        D    ++I  L  YP  ++ A    EP  +A +
Sbjct: 461 IRKSGIAGIDTTAD-YPLD--------DAYSWEIIKLLESYPDDVQRAYEKFEPSVIAKH 511

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              LA  F+ ++++ +       V A++ +    RL LV +VA+I+   L ++GV++P++
Sbjct: 512 AIHLAQAFNKYYANSK-------VLADDAQ-KPARLALVQSVATILKEDLRLLGVQAPDQ 563

Query: 585 M 585
           M
Sbjct: 564 M 564


>gi|154484785|ref|ZP_02027233.1| hypothetical protein EUBVEN_02503 [Eubacterium ventriosum ATCC
           27560]
 gi|149734633|gb|EDM50550.1| hypothetical protein EUBVEN_02503 [Eubacterium ventriosum ATCC
           27560]
          Length = 588

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 141/611 (23%), Positives = 258/611 (42%), Gaps = 94/611 (15%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           +KK+   +V  RP  C +     N AM  ++     P+ IA  +V  ++ +   +SV   
Sbjct: 22  DKKLGKVVVSNRPDLCQY---QCNGAMAGAKLYHKAPIMIANQVVESLQDNEMFESVEAV 78

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             GFIN+ L+  ++ K L+ +  +  +YG       T V I++  AN   P+HVGH R A
Sbjct: 79  MPGFINIKLNSEFVAKYLNDMKEAD-KYGCENKAPETIV-IDYGGANVAKPLHVGHLRSA 136

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP 197
           V+G+++  +  F G +V  + ++ D G Q+  +   +  R    +Y ++S       + P
Sbjct: 137 VIGESVKRIERFMGNKVISDVHLGDWGLQMGLIITELECRKPDLVYFDESYTGEYPEEAP 196

Query: 198 ------EGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                 E  YP    K  V +E  +K     L   +  + P    +  + +MK+  +DLK
Sbjct: 197 FTISELEEIYPCASAKSKVDEEFKEKAHQATLKL-QSGYAPYTAIW--KHIMKVSVEDLK 253

Query: 251 A----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                LN+  D++  E D     P  I+D+ID   +  Y  +G L    SK       D 
Sbjct: 254 KNYGNLNVDFDLWKGESDAQPYIPGLIQDLIDK--KLAYESQGALVVDISKED-----DT 306

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD----- 359
           K+L             P +  KSDG+  Y  +DLA    + E+ +    Y+  +D     
Sbjct: 307 KEL------------PPCIVRKSDGAALYATSDLATI-IQREQDYKPNHYIYVADKRQEL 353

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H   V R+   A  V E        L       +DG P K   R G  + L +++ ++  
Sbjct: 354 HFTQVFRVSKKANIVDENTKM--EFLGFGTMNGKDGKPFKT--RDGGVMRLENLIAQINK 409

Query: 420 DSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YV 454
                +M  R  SE           L    +  +  Q+ ++ +F              Y+
Sbjct: 410 AVYDKIMENRTVSEEEANNTAKIVGLAALKYGDLSNQASKDYIFDIDRFASFEGNTGPYI 469

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            Y   R +SI  + K    + D +L      P  +  + S++QL++ +A++  +IENA  
Sbjct: 470 LYTIVRIKSILEKYKAESGNADVNL------PVINTDNGSQMQLMLEVAKFNEIIENAAE 523

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+K+  Y+YDL++ F+  +         + +   ++      + L++   +++   +
Sbjct: 524 ELAPHKICSYVYDLSNAFNRFYH------ETKILAEEDQTKKAGYIALINLTINVLEQCI 577

Query: 575 NIIGVESPNEM 585
           +++G  +P+ M
Sbjct: 578 DLLGFSAPDRM 588


>gi|182437971|ref|YP_001825690.1| arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238688989|sp|B1VTB7|SYR_STRGG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|178466487|dbj|BAG21007.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 594

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 235/595 (39%), Gaps = 95/595 (15%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  + A +     +  + ++G GF+N+ L+   + + L++
Sbjct: 41  FQANGILALAKKLKGNPRELAAQVTAALPAGGLIKDIEVSGPGFLNVTLTDRAIVETLAA 100

Query: 105 IVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
               G    G  L        I++   N    MHVGH R AV+GD +  ++ F+G  V R
Sbjct: 101 RAADGEGRLGVPLKDDAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTGENVVR 160

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSE 220
            ++I D G Q   L +     +  AL +         +G      L  V KE     S  
Sbjct: 161 RHHIGDWGTQFGML-IQYLIEHPGALQHEGGPGDGASDGEAAMSTLNRVYKE-----SRA 214

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-----------DFHRGD 269
           L +  EE      K  S   ++ +   D   L + H  F+ E            D    D
Sbjct: 215 LFDSDEE-----FKARSRDRVVALQAGDPGTLELWHR-FVDESKIYFHSVFDKLDMEIRD 268

Query: 270 P-----SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-P 323
           P     S   D+++   R       IL     +T      +    +F   + G D +R P
Sbjct: 269 PDIVGESGYNDMLEETCR-------IL----EETGVAVRSEGALCVFFDDVKGPDGNRVP 317

Query: 324 LL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           L+  K++G Y Y A DL+  + + +    D ++YV+ +  S + + +   A         
Sbjct: 318 LIVKKTNGGYGYAATDLSAVRNRVQDLKADTLLYVVDARQSLHFRMVFETARRAGWLGDD 377

Query: 381 IN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +  V L     L +DG P K   R G+ + L  ++DE                       
Sbjct: 378 VKAVQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEAVQRATAVVRDKAEKVGLSEEEI 435

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L         FD  ++     +  V Y+QYAYAR RSI R+A D
Sbjct: 436 VENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVALHGDTSV-YLQYAYARIRSILRKAGD 494

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
             P              E E   +E  L +HL ++  V+       EP+KLA YLY LAS
Sbjct: 495 AVP----------AAHPELELAPAERALGLHLDQFGEVLAEVGTGYEPHKLAAYLYQLAS 544

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               H +   +  ++     N  ++   RL LV   A  ++ G+ ++G+ +P  +
Sbjct: 545 ----HLTTFYDQCQV-LSPDNAPEVVENRLFLVELTARTLHRGMALLGIRTPERL 594


>gi|304413606|ref|ZP_07395050.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283697|gb|EFL92091.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 576

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 132/593 (22%), Positives = 229/593 (38%), Gaps = 103/593 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    NA M +++ L + P  +A+ IV R+ +      + IAG GFIN++L   +L   +
Sbjct: 37  GDYQANAVMSVAKMLNIPPRQLADKIVQRLDLAGIAQKIEIAGPGFINIFLDRQWLATQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I+    + G   +   T V I++ + N    MHVGH R  ++GD  A  +   G+ V 
Sbjct: 97  DHIL-KAPKLGLTSVIPQTIV-IDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D++  +     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQRENADDMALSDLEKFYRAAKKNYDEDNEFAQHARAYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G E       +L++   E+        S Q +              H     ED 
Sbjct: 215 VKLQAGDEHCRSMWRKLVDITMEQ-----NQLSYQRL--------------HVTLTKEDI 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDV 320
                 +P +  II +L  +G   E                +   ++F        G+ +
Sbjct: 256 MGESLYNPMLPGIITDLKTKGLAVES---------------NGATVVFVGEYKNKKGEPM 300

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
              + K DG Y Y   D+A  K +Y+  G D ++Y   S    ++ ++  +A  A    +
Sbjct: 301 GVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYYTDSRQHQHLTQIWQIARQAGYVPE 360

Query: 378 KAQINVLLCELVRLYRDGMPIKMS---------------KRAGDFI----------TLRH 412
              +   +  ++ L +DG P K                 +RAG  I           L+ 
Sbjct: 361 SMPLEHHMFGMM-LGKDGKPFKSRTGENIKLADLLDEAIERAGKLIREKNPDISPQELKQ 419

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + D VG  ++++  L +  +    FD+  +      N   Y+QYAY R  SIF++A    
Sbjct: 420 IADAVGIGALKYADLSKNRTTDYIFDWDNMLT-FDGNTAPYIQYAYTRIISIFKRAA--- 475

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             +D +     VI  E      E  L   L ++  +I        P+ +  YLY+LA +F
Sbjct: 476 --IDEEHLNLPVIITEDR----EAALTTSLLQFEEIITTVARDGTPHVMCSYLYNLAVLF 529

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + H         + A N +    RL+L    A  +  GL+++G+++  +M
Sbjct: 530 SSFYEH------CPILNAGNEQTCQSRLKLALLTAKTLKQGLDVLGIQTVEKM 576


>gi|269967949|ref|ZP_06181989.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269827472|gb|EEZ81766.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 577

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 135/611 (22%), Positives = 231/611 (37%), Gaps = 138/611 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        +   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGY 200
           +V R  +I D G Q   L                    L  F+R  + LY+ D D     
Sbjct: 152 KVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEDFAVKA 211

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALN 253
              V     G    D+Y +E+       W  +V    +Q         + + RDD+   +
Sbjct: 212 RNYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGES 260

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR- 312
           + +D+           P     I+ +L  QG   E                D  Q++F  
Sbjct: 261 MYNDML----------PK----IVADLKEQGLAVED---------------DGAQVVFLD 291

Query: 313 --STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------ 363
                 G+ +   + K DG + Y   D+A  K +YE    D ++Y + S    +      
Sbjct: 292 EYKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWT 351

Query: 364 -VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            V++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + 
Sbjct: 352 IVRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAA 403

Query: 423 RFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYV 454
           +  ++  KN EL           +     K  + SK                  N   Y+
Sbjct: 404 Q--LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYM 461

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R  SIF +A      L  D+            D  E  LI  L ++   +++   
Sbjct: 462 QYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVAR 512

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P+ +  YL++LA  F   +           + A +  +   RL+L    A  I  GL
Sbjct: 513 EGQPHIMCSYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGL 566

Query: 575 NIIGVESPNEM 585
           +++G+++   M
Sbjct: 567 SLLGIDTLERM 577


>gi|166365931|ref|YP_001658204.1| arginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083539|sp|B0JLI8|SYR_MICAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166088304|dbj|BAG03012.1| arginyl-tRNA-synthetase [Microcystis aeruginosa NIES-843]
          Length = 585

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 241/583 (41%), Gaps = 89/583 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N ++ L++ L   P  +A  ++  ++ID    +  IAG GFINL L PSYL   L
Sbjct: 40  GDYQCNISLSLAKELKQKPREVAATLLKNLEIDDLCQTPEIAGPGFINLTLKPSYLETQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++      G        K+ ++F S N    MHVGH R  ++GD +A ++ F  ++V 
Sbjct: 100 KDLITDN-RLGVATANPSQKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRHHQVI 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   D+ L  G     Y K      A     E  
Sbjct: 159 RLNHVGDWGTQFGMLITYLQEAYPSALTQADA-LDLGDLVSFYKK------AKIRFDEDE 211

Query: 223 NFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272
           NF E     +VK  S         Q + +  R + + +    DI ++E    RG+   +P
Sbjct: 212 NFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILDIKLTE----RGESFYNP 267

Query: 273 -IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +  +I  L +QG + E  G L       T K               G+ +   + KSDG
Sbjct: 268 YLEAVIRELDQQGLLTEDNGALCVFLDGFTNK--------------EGEPLPLIVKKSDG 313

Query: 330 SYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            Y Y   DLA   ++ + ++  + +IYV  +  + +  ++  VA         + V+   
Sbjct: 314 GYNYATTDLAAICYRVREDKA-ERIIYVTDAGQANHFAQVFQVAKKAGFLPDNVAVVHVA 372

Query: 388 L-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM---MLWRKNSELLDF------ 437
             + L  DG   K+  R+G+ + L+ ++D+  + S+  +   +   +  E  DF      
Sbjct: 373 FGLVLGEDGK--KLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAE 430

Query: 438 -------DFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLD 476
                   +  + +    N VF              Y+ YAYAR +SI R+    F DL 
Sbjct: 431 TVGLSAVKYADLSQNRHSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDLS 490

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            +    ++I +    D SEL L   L + P VI        P +L  YLY+L+  ++  +
Sbjct: 491 AN---SSLILK----DESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFY 543

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +    P L+  +     +   RL L    A  +  GL+++G+
Sbjct: 544 ENC---PVLKAAEP----IKTSRLFLCDLTARTLKLGLSLLGI 579


>gi|91228441|ref|ZP_01262366.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188025|gb|EAS74332.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 577

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 135/611 (22%), Positives = 231/611 (37%), Gaps = 138/611 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + +     G+        +   +  ++ + N    MHVGH R  ++GD +   + F G+
Sbjct: 97  EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGY 200
           +V R  +I D G Q   L                    L  F+R  + LY+ D D     
Sbjct: 152 KVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEDFAVKA 211

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALN 253
              V     G    D+Y +E+       W  +V    +Q         + + RDD+   +
Sbjct: 212 RNYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGES 260

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR- 312
           + +D+           P     I+ +L  QG   E                D  Q++F  
Sbjct: 261 MYNDML----------PK----IVADLKEQGLAVED---------------DGAQVVFLD 291

Query: 313 --STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------ 363
                 G+ +   + K DG + Y   D+A  K +YE    D ++Y + S    +      
Sbjct: 292 EYKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWT 351

Query: 364 -VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            V++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + 
Sbjct: 352 IVRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAA 403

Query: 423 RFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYV 454
           +  ++  KN EL           +     K  + SK                  N   Y+
Sbjct: 404 Q--LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYM 461

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R  SIF +A      L  D+            D  E  LI  L ++   +++   
Sbjct: 462 QYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVAR 512

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P+ +  YL++LA  F   +           + A +  +   RL+L    A  I  GL
Sbjct: 513 EGQPHIMCSYLFELAGQFSSFYE------ACPILVAEDEAVKQSRLKLAALTAKTIKQGL 566

Query: 575 NIIGVESPNEM 585
           +++G+++   M
Sbjct: 567 SLLGIDTLERM 577


>gi|125719041|ref|YP_001036174.1| arginyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498958|gb|ABN45624.1| Arginyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 562

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 247/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I   I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAENIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G G  V I+  S N   P  VGH R  V+GD+L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNGENVTIDLSSPNIAKPFSVGHLRSTVIGDSLS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDDEGRLWFKKLEDGDPEATELWQWFRDESLMEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|72160673|ref|YP_288330.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
 gi|109895049|sp|Q47TB0|SYR_THEFY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71914405|gb|AAZ54307.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 576

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 232/586 (39%), Gaps = 93/586 (15%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N A+ L++ L   P  +A  I   + I      V I+G GFINL L   ++   +  
Sbjct: 39  FQANVALALAKRLRRSPRDVATAITEHLDISDVCSKVEISGPGFINLTLRDDWIAHQVHD 98

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           ++    E     + +   + I++ + N    MHVGH R  VVGD LA ++ F G+ V R+
Sbjct: 99  LLTD--ERLGTPVQESQNIPIDYSAPNVAKEMHVGHLRTTVVGDALARILEFLGHHVIRQ 156

Query: 165 YYINDAGAQINTLALSVFW----RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
            +I D G     L   +        + A   +D   P  +Y     K    E        
Sbjct: 157 NHIGDWGTPFGMLIEHLLEVGEDSAEAAQLKSD---PNAFYQAARAKFDSDE-------- 205

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN------IQHDIFISEDDFHRGDPSPIR 274
             +F +     +V   S  A    +  DL  L+      I   + ++  D H    S   
Sbjct: 206 --DFADRARRRVVALQSGDAETLRLWRDLIELSKIYFNRIYRKLDVTLTDAHLAGESTYN 263

Query: 275 DII----DNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL-- 325
           D++    D LA +G   V +G L          C       +F     G +    PL+  
Sbjct: 264 DMLGPVCDELAEKGLAVVSDGAL----------C-------VFLEGFTGREGKPVPLIIR 306

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA------AAVSEKK 378
           KSDG Y Y   DLA  K + E+   D +IYV+G+  S +++ +   A             
Sbjct: 307 KSDGGYGYATTDLATIKYRVEQLKADRIIYVVGAPQSLHLRMVYETARQAGWLGNAEPIH 366

Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI----------TLRHVVDEVGS 419
            QI  +L    ++   R G P+++        +RA   +          T   +  +VG 
Sbjct: 367 VQIGNVLGSDGKILRTRSGAPVRLMALLDEAVERASAVVAQTRPDLDEETRAAIARDVGI 426

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L   +     FDF ++   +  N   Y+QYA AR RSIFR+           +
Sbjct: 427 GAVKYADLSIAHDTEYVFDFDRMLALNG-NTGPYLQYAVARIRSIFRKGG---------I 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P  V       + +E  L + L ++   +       EP++L  YL+DLA  F   +   
Sbjct: 477 DPAQVTGPIQVTEPAERALALKLLDFGATVVQVGDTLEPHRLCTYLFDLAQTFTAFYE-- 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              P L+   A+  ++   RL L       +  GL+++GV +P +M
Sbjct: 535 -ACPVLK---ADRDEVRNSRLALTAVTLHTLVKGLDLLGVRAPEQM 576


>gi|328950287|ref|YP_004367622.1| Arginyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450611|gb|AEB11512.1| Arginyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 608

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 158/649 (24%), Positives = 269/649 (41%), Gaps = 112/649 (17%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S+L+  + +    + VE    + +V E P D   G   T  A  L+R L   P  IA
Sbjct: 3   DVKSQLRTSVLQALQALGVEDPP-EVVVQETPPDKP-GDYGTPIAFQLARALRKPPPAIA 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   + +   V   F  G G++N  L P++L +  ++ +            +  KV +
Sbjct: 61  AQLAEHLPLPQGVARAFAVG-GYLNFELEPAHLIRAAAAPL-------EPFPKRPGKVLV 112

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  S NP   +HVGH R   +GD ++ ++ F+G EV    YI+D G Q+   A S+F   
Sbjct: 113 EHTSVNPNKELHVGHLRNICLGDAISRILRFAGREVEVLNYIDDTGRQV---AESLFALE 169

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM-KI 244
              L  + +   + +    Y++ + +ELAD  +   L    ++ L  ++   ++  + KI
Sbjct: 170 HYGLTYDGTQKYDHWVGAAYVR-LHQELADPEAKARLEPRIQEVLHRLEAGELRDEVDKI 228

Query: 245 IRDDLKA---LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL----PPPKSK 297
           +R  L+    L  ++D+ + E D               + R+G++ + +      P  S+
Sbjct: 229 VRAQLETMHRLGAEYDVLVWESD---------------IVREGFLAKAMALLEQTPYVSR 273

Query: 298 TTQKCDMDRKQLLFRSTMVG-DDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIY 354
            TQ        +   + + G +D    L++S+G+ TY A D+A  ++K    +G     Y
Sbjct: 274 PTQGKYAGALVIDVSAFLPGLEDPYLVLIRSNGTATYTAKDIAFQFWKMGLFKGLKFRPY 333

Query: 355 VM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCE------LVR--LYRDGMP-------- 397
               S  + Y    E  A      K  INV+         +VR  L  +G P        
Sbjct: 334 AQEPSGKTLYTSAPEGEAMPFGGAKETINVIDVRQSHPQAVVRASLEVEGRPDLAARAYH 393

Query: 398 ----------IKMSKRAGDFITLRHVVDE-------------------------VGSDSV 422
                       +S R G  +++  V+DE                         VG  +V
Sbjct: 394 LAYETVLLEGKPLSGRKGHTVSVDEVLDEAVRRARAIIAEKNPEHPDPNRAAEVVGIGAV 453

Query: 423 RFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLF 480
           RF M+  +  + +DF + +    +    P  YVQYA+AR  SI R+A +    D D D  
Sbjct: 454 RFAMVKTEPKKQIDFRWEQALSFEGDSGP--YVQYAHARADSILRKAAEAGLTDADAD-- 509

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHW 536
           P    P        E+QL   L  +P  +++A   + P+ LA YL DL     + ++   
Sbjct: 510 PTMATP-------YEVQLAKVLLRFPEAVQDAAEQKTPHILAQYLLDLAAAWNAYYNAKT 562

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             GR  P    +QA    L   RL+LV  +   + +GL ++G+ +P  M
Sbjct: 563 PEGR--PATPVLQAPE-GLRGARLKLVRQLRDTLRTGLELLGITAPEVM 608


>gi|300723081|ref|YP_003712379.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629596|emb|CBJ90199.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 576

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 130/581 (22%), Positives = 240/581 (41%), Gaps = 79/581 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE +V  + +      + IAG GFIN++L   ++   L
Sbjct: 37  GDYQANGVMAAAKKVGMPPRQLAEKVVGLLDLQGIASKIEIAGPGFINIFLDKDWIATHL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  +   + G + +   T V I++ + N    MH+GH R  ++GD  A  + F G+ V 
Sbjct: 97  ET-ALKDKKLGISPVNPQTIV-IDYSAPNVAKQMHIGHIRSTIIGDAAARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216
           R  ++ D G Q   L       Y + + N +      +DL E Y          +E A +
Sbjct: 155 RANHLGDWGTQFGMLIA-----YLEKVQNENASDMALADLEEFYREAKKTYDEDEEFAIR 209

Query: 217 YSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPS 271
             S ++     +++   +    V   M   ++    LN+     ++E D        D  
Sbjct: 210 ARSYVVRLQGGDEYCRTMWRKLVDITMSQNQETYNRLNVT----LTEKDMMGESLYNDML 265

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           P  D++ +L ++G   E         T    D  + +        G+ +   + K DG Y
Sbjct: 266 P--DVVADLKQKGLAVE-----SDGATVVYLDEYKNK-------EGEPMGVIIQKKDGGY 311

Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383
            Y   D+A  K ++E    D ++Y + S    +       V++   +  ++S +     +
Sbjct: 312 LYTTTDIACAKYRHEVLHADRVLYYIDSRQHQHLMQAWTIVRKAGYIPESLSLEHHMFGM 371

Query: 384 LLCELVRLY--RDGMPIKMS-------KRAGDFI----------TLRHVVDEVGSDSVRF 424
           +L +  + +  R G  +K+S       +RA   I           L+ V++ VG  +V++
Sbjct: 372 MLGKDGKPFKTRAGGTVKLSDLLDEAIERADTLIREKNPDMPEDELKKVIEAVGIGAVKY 431

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L +  +    FD+  +    + N   Y+QYAY R  SIF++A     ++D     + V
Sbjct: 432 ADLSKSRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVNSIFKRA-----EIDESSLTQPV 485

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I  E      E  L   L ++   I        P+ +  YLYDLA +F G + H      
Sbjct: 486 ILNEGR----EQTLATRLLQFEETITTVAREGTPHVMCSYLYDLAGLFSGFYEH------ 535

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + A++ ++   RL+L    A  +  GL  +G+++   M
Sbjct: 536 CPILNADSEEIRQSRLKLALLTAKTLKQGLETLGIQTVERM 576


>gi|293608014|ref|ZP_06690317.1| predicted protein [Acinetobacter sp. SH024]
 gi|292828587|gb|EFF86949.1| predicted protein [Acinetobacter sp. SH024]
          Length = 594

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 136/584 (23%), Positives = 243/584 (41%), Gaps = 88/584 (15%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N  + +++ L  +P  +A  +V  + I P+  +V ++G GFINL LS   L +  +S  +
Sbjct: 53  NGVLQVAKSLRKNPFDLATTVVNHLLISPEFSNVSVSGPGFINLKLSDEMLNRS-ASKQL 111

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                  +L+     + I+F   N   P+HVGH R  ++G+++  + A  GY +  + ++
Sbjct: 112 EDPNLNVSLVNNKRCILIDFGGPNVAKPLHVGHLRSLIIGESVRRIFAIQGYNIISDLHL 171

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            D G Q+  L   +  RY   L   D   P      +        L  + S    N PE 
Sbjct: 172 GDWGLQMGMLISEIEIRYPN-LRCFDELNPSLSIDSLKCIEELDSLYPEASKACQNDPER 230

Query: 228 KWLPIVKDYSVQA-------MMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSP 272
                    ++QA       + + +R         D++ LN   D+F+ E D     P  
Sbjct: 231 MQFARKVTAALQAGHVGYRLLWEKLRSISLSKQLKDMELLNAHFDLFLGESDVQPLIP-- 288

Query: 273 IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328
             ++I +L  +G   E  G L    S+ T K  M                  PL+  KSD
Sbjct: 289 --EMIQSLRSKGIAKESQGALIIDVSEETDKKPMP-----------------PLILEKSD 329

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLC 386
           GS  Y   DLA    +Y +   ++++YV+    S + +++  AV  A   K  ++  +  
Sbjct: 330 GSALYATTDLATVLDRYIKFQPESILYVVDQRQSLHFEQVFRAVRVADYAKSTKLIHIGF 389

Query: 387 ELVR-------LYRDGMPIKMS-------KRAGDFITLRH---------VVDEVGSDSVR 423
             V          RDG   ++S       ++A   I LR          +  +VG  +++
Sbjct: 390 GTVNGVDGKPYKTRDGGVARLSDLLEEAIQKAKSRIALRSETTGEESELLARKVGLAAIK 449

Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFP 481
           F  L         FD  + V  + +  P  YVQYA  R  SI ++A++  +   D ++  
Sbjct: 450 FADLDSHRQSGYIFDAERLVSFEGRTGP--YVQYACVRISSILKKAEEYGWSKGDINI-- 505

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                     + +E +L++  A +P  I + +    P ++  Y+++LA VFH  +     
Sbjct: 506 ---------IEPAERELVIECARFPDYILSVSSTYAPNEITNYVFNLAQVFHRFYKE--- 553

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + ANN ++   R+ L     ++++ GL ++G+E P  M
Sbjct: 554 ---CSVMNANNDEIRSSRISLCMLAHAVLSRGLWLLGIEVPTRM 594


>gi|302528902|ref|ZP_07281244.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437797|gb|EFL09613.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 572

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 241/592 (40%), Gaps = 119/592 (20%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N AM L + LG  P  +A  IV  +++D   D   IAG GF+N  L   +L + ++    
Sbjct: 46  NLAMSLGKRLGKPPREVAAGIVENLELDGVADRPEIAGPGFLNFVLRREWLEQRVAEQAR 105

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                G     +  +V +++ S N    MHVGH R  V+GD ++ L+   G+EV    ++
Sbjct: 106 DD-RLGVPETEQPRRVALDYSSPNVAKEMHVGHLRSTVLGDAISRLLRVVGHEVLPHNHL 164

Query: 168 NDAGAQINTLA-------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            D G     L              L+ F  YQ A    D+D  E +      + V  +  
Sbjct: 165 GDWGTPFGMLIEHHLDEPSGDRSDLNAF--YQAARRKFDAD--EAFATRSRERVVKLQSG 220

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272
           D    + L F    W  +V D S +      R        Q  I +++DD + G+   +P
Sbjct: 221 DP---DTLAF----WQELV-DESTRHFNAAYR--------QLGITLTDDDIY-GESFYNP 263

Query: 273 -IRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL--K 326
            + +++D L   G   + +G +          C       +F       + DR PL+  K
Sbjct: 264 YLGEVVDELEADGLTEISDGAV----------C-------VFPEGFANREGDRLPLIVRK 306

Query: 327 SDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
            DG Y Y A DLA  +    ERG  +++YV+G+  + +   + AVA A       ++ + 
Sbjct: 307 RDGGYGYAATDLATIRYWTAERGATDLLYVVGTPQAQHFAMIFAVARAA----GWLDGVH 362

Query: 386 CELVR----LYRDGMPIKMSKRAGDFITL--------------------------RHVVD 415
            E +     L  DG    M  RAG+ I L                          R V  
Sbjct: 363 AEHIGFGSILGADGK--VMRTRAGETIKLANLLDEAVAQAAEVVAERSELSEEEQREVAR 420

Query: 416 EVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            VG  +V++  L   R+   + D+D    K+    N   Y+QYA+AR  SI  +A +   
Sbjct: 421 AVGIGAVKYADLSSDRERDYVFDWDRMLAKDG---NTSVYLQYAHARIESILAKAGETD- 476

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
               D  P  V+ QE     +E  L + L  +   I  AT A  P+KL  YLYD A  F 
Sbjct: 477 ----DNAP--VVLQEP----AERALALTLLRFSEAISAATSAYAPHKLCTYLYDTAVTF- 525

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 R   +   + A   +L   R+QL    +  +  GL ++G+E+P  +
Sbjct: 526 -----SRFYEQCPVLTAETPELRASRVQLAKLTSRTLVQGLALLGIEAPRRL 572


>gi|291230340|ref|XP_002735133.1| PREDICTED: Arginyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 666

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 251/584 (42%), Gaps = 75/584 (12%)

Query: 43  GHLSTNAAMILSRPL-GL----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L GL     P  IAE IV  +     ++ V IAG GFIN++L+ S+
Sbjct: 117 GEYQCNSAMGISQQLKGLGIKKSPREIAETIVKGLPPSEMIEKVEIAGPGFINIHLTKSF 176

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   L+ ++V G+      IG+  +V ++  S N    MHVGH R  ++GD+++ L  F 
Sbjct: 177 VSHKLNELLVIGVRPPP--IGRKKRVVVDMSSPNIAKEMHVGHLRSTIIGDSISRLYEFL 234

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           G++V R  +I D G Q   L   +  ++   +  +    DL + +Y    ++   +E   
Sbjct: 235 GHDVLRLNHIGDWGTQFGMLIAHLMDKFPNYVAESPPIGDL-QDFYKESKIRFDNEEEFK 293

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K +  L+   + K   I K +++  +  + R + + +  + DI I E    RG+ S  +D
Sbjct: 294 KRAYSLVVKLQAKEPDITKAWNL--ICDVSRREFQKIYDRLDIKIVE----RGE-SFYQD 346

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           ++ +  R            ++K   + D  RK +     + G DV   ++KSDG  TY  
Sbjct: 347 MMGDTVR----------ALEAKGVVEVDDGRKVVF----VPGHDVPLTVVKSDGGNTYDT 392

Query: 336 ADLAYFKCKYERGFD------------------NMIYVMGSDHSGY---VKRLEAVAAAV 374
           +D+A     + R FD                  N+I+  G     Y     R+E +   V
Sbjct: 393 SDMAAL---HHRLFDEHADVILYVVDAGQGLHFNLIFAAGKLVGWYDPSSTRVEHIGFGV 449

Query: 375 --SEKKAQINVLLCELVRL---YRDGMPIKMSK----RAGDFIT---LRHVVDEVGSDSV 422
              E K +      E +RL     +G+   + K       + +T   L+   + V    +
Sbjct: 450 VLGEDKKKFKTRSGETIRLADLLEEGLKRSLQKLKDKNRHEILTAEELKAAQESVAYGCI 509

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L         F F K+ +  K N   Y+ YA+ R RSI R A     ++D D   +
Sbjct: 510 KYSDLSHNRVNDYVFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA-----NIDRDTLKK 563

Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  + D   E +L   L   P ++         + L  YLY++++ F   + H   
Sbjct: 564 AAETTAVDLDHPKEWKLGKCLLRLPDILLRVLDDLCMHTLCDYLYEISTTFTEFYDHCYC 623

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R  +    K+ M RL L  A A+++  G +I+G+    +M
Sbjct: 624 VEKDRQTK-EIIKVNMSRLLLCEATANVMECGFSILGINPVEKM 666


>gi|145639894|ref|ZP_01795494.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145270985|gb|EDK10902.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
          Length = 581

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 135/594 (22%), Positives = 225/594 (37%), Gaps = 112/594 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++   ++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +V     Q      R  L     + D+ + E  
Sbjct: 215 ----VKLQSGDEYCRTM-------WKRLVDITMQQNQYNYAR--LNVTLTEKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           ++   PS ++D    L +QG   E  G L     +   K               GD +  
Sbjct: 261 YNPMLPSIVKD----LKKQGLAVENDGALVVYLYEFKNKD--------------GDPMGV 302

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAV 374
            + K DG + Y   D+A  K +YE    N   V                 ++   V  + 
Sbjct: 303 IVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSF 362

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S +     ++L       +DG P K   R G  + L  ++DE                  
Sbjct: 363 SLEHKNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSN 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 DEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                   D +       P   + D  E  L + L ++   ++       P+ L  YLY+
Sbjct: 474 T-------DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYE 525

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           LA +F   + H         + A +  + + RL+L       +  GL ++G+++
Sbjct: 526 LAGIFSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLTLLGIKT 573


>gi|257081952|ref|ZP_05576313.1| arginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989982|gb|EEU77284.1| arginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 563

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 139/603 (23%), Positives = 258/603 (42%), Gaps = 98/603 (16%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIASELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGY 200
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++A+       P   
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVRQQ----PINE 189

Query: 201 YPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQH 256
              +Y++ H   E   K   E        W   ++  D     + K  R + LK  +  +
Sbjct: 190 LLRLYVQFHEEAEEKPKLEDEA-----RAWFKKLEEGDQEANELWKWFRSESLKEFDKIY 244

Query: 257 DIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            +   E D + G+      + +I+  L  +  + E       ++  +  D+    L    
Sbjct: 245 SMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTE-------NQGAEIVDLTEYNL---- 293

Query: 314 TMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
                    P L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+
Sbjct: 294 --------NPALIRKSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLK 343

Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           AV                          +S +K +I VLL E++         +++++  
Sbjct: 344 AVLKELGFDWSDDMEHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNP 402

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462
           D      V  +VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  
Sbjct: 403 DLANREEVAKQVGVGAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAM 458

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A           F  +   + +  D    +++  L ++P  +  A    EP  +A
Sbjct: 459 SILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIA 508

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +   LA  F+ +++H      +R +  + +K    RL LV+AVA+++   L ++G+ +P
Sbjct: 509 KHSIHLAQAFNKYYAH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAP 560

Query: 583 NEM 585
            EM
Sbjct: 561 EEM 563


>gi|308389652|gb|ADO31972.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325208446|gb|ADZ03898.1| arginyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 572

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDATAPTVLSE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|327467950|gb|EGF13440.1| arginine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 562

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQSEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDQEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D++             D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDLE-------------DFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAAATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|330827801|ref|YP_004390753.1| arginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328802937|gb|AEB48136.1| Arginyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 581

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 240/602 (39%), Gaps = 96/602 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ ++R ++ AHG L+TN AM+L++P   +P  +A  I+  +     +  V IAG GFIN
Sbjct: 29  RVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAAAIIEHLPASDLIAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L   + ++V S     R  +     V +++ + N    M V H R  V+GD  
Sbjct: 89  FFFDQRWLAGQVEAMVTSANANVR--LPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVA 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNN 192
           A  + F G++V R  +I D G Q   L                   L  F+   +  Y+ 
Sbjct: 147 ARALEFLGHKVIRANHIGDWGTQFGMLIAYLEKMSNEHASDMALKDLEAFYTQAKRCYDE 206

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D    E     V     G E       +L++   E+              +I  D L   
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQ-------------NQINYDRLNVS 253

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               DI + E  ++   P    +I+ +L  +G   E       S+      +D     F+
Sbjct: 254 LTNKDI-MGESMYNDMLP----EIVADLKAKGLAVE-------SEGATVVFLDE----FK 297

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV------- 364
           +   G+ +   + KSDG + Y   D+A  K +YE  G D ++Y + S    ++       
Sbjct: 298 NK-DGEAMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQHLMQAWTIT 356

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLR---- 411
           ++   V  +V  +     ++L +  R Y  R G  +K+        +RA   +  R    
Sbjct: 357 RKAGYVPESVPLEHHAFGMMLGKDGRPYKTRSGGTVKLVDLLNEAEERAAALLESRNSDL 416

Query: 412 ------HVVDEVGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                 +VV+ +   +V++  L +  +   + D+D     E    N   Y+QYAY R +S
Sbjct: 417 SAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYLQYAYTRIQS 473

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IFR+A     ++D +    NV   E     +E  L   L ++   +        P+ L  
Sbjct: 474 IFRKA-----NIDAETLTGNVTLNEE----AEEVLAQKLIQFSDAVNGVADKGMPHLLCT 524

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YLY+L+  F   +     N         +      RL L  A A ++  GL ++G+ +  
Sbjct: 525 YLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCAATAKVLKLGLGVLGIHTLE 579

Query: 584 EM 585
            M
Sbjct: 580 RM 581


>gi|301156166|emb|CBW15637.1| arginyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 577

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 235/599 (39%), Gaps = 114/599 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++    +    +   IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDHADLSDIAEKTEIAGPGFINIFLNPTWLANNV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +     G +   K T V I++ S N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 97  SA-ALKDQNLGVSANEKQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELQDLEAFYREAKKHYDEDESFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +V D ++Q   +   D L     + D+ + E  
Sbjct: 215 ----VKLQGGDEYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTEKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P+    I+++L +QG   E                D   L+       +    P+
Sbjct: 261 YNPMLPA----IVEDLKKQGLAVE----------------DEGALVVYLDEFKNKEGEPM 300

Query: 325 ----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
                K DG + Y   D+A  K +YE    D  +    +  S ++++    A  ++ K  
Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAG 356

Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
            + +    E     + L +DG P K   R G  + L  ++DE                  
Sbjct: 357 YVPDSFSLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSD 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 EEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           A         ++ P  +   + +  D  E  L + L ++   ++       P+ L  YLY
Sbjct: 474 A---------NVNPTALAEAKIQLSDEKERALAIKLLQFEEAVQTVGKEGTPHVLCAYLY 524

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LA  F   + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 525 ELAGAFSSFYEH------CPILNAEDENVKLSRLKLASLTEKTLKQGLALLGIKTIEKM 577


>gi|269303449|gb|ACZ33549.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 561

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 237/584 (40%), Gaps = 110/584 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA +  +P    + IAG GFIN   SP +L + L
Sbjct: 39  GHYQCNDAMKLARVLKKAPRAIAEAIVAELPQEP-FSLIEIAGAGFINFTFSPVFLNQQL 97

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                  ++ G   + +  K+ I+F S N    MHVGH R  ++GD+LA + ++ G++V 
Sbjct: 98  EHFR-DALKLGFQ-VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVL 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  +I D G      A  +   Y Q    + SDL              ++L   Y    +
Sbjct: 156 RLNHIGDWGT-----AFGMLISYLQENPCDYSDL--------------EDLTSLYKKAYV 196

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLA 281
            F  ++     K  S Q ++ +   D +A+ I   I   SE  F +     I DI+D + 
Sbjct: 197 CFTNDEEF---KKRSQQNVVALQAKDPQAIAIWEKICETSEKAFQK-----IYDILDIVV 248

Query: 282 --RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRPLL--KSDGSYTY 333
             R    Y   LP          D+++K LL  S     +  +    P +  KSDG Y Y
Sbjct: 249 EKRGESFYNPFLPEIIE------DLEKKGLLTVSNDAKCVFHEAFSIPFMVQKSDGGYNY 302

Query: 334 FAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              DLA  + + E    D +I V     S + + LEA A A      Q  +       L 
Sbjct: 303 ATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAG--YLQPGIFSHVGFGLV 360

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425
            D    K+  R+G+ + LR ++D                            +G +++++ 
Sbjct: 361 LDPQGKKLKTRSGENVKLRELLDTAIEKAEEALREHRPELTDEEIQERAPVIGINAIKYS 420

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L    +    F F K+  + + N   ++ YAY R + I R               R  I
Sbjct: 421 DLSSHRTSDYVFSFEKML-RFEGNTAMFLLYAYVRIQGIKR---------------RLGI 464

Query: 486 PQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--S 537
            Q S     E+Q      L + L  +P  +E+      P+ L  YLY+L   F+G +   
Sbjct: 465 SQLSLEGPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDC 524

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           H +++P  +            RL L      ++ +G++++G+++
Sbjct: 525 HIQDSPYAK-----------SRLFLCALTEQVLATGMHLLGLKT 557


>gi|45198315|ref|NP_985344.1| AFL206Cp [Ashbya gossypii ATCC 10895]
 gi|44984202|gb|AAS53168.1| AFL206Cp [Ashbya gossypii ATCC 10895]
          Length = 648

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 130/556 (23%), Positives = 227/556 (40%), Gaps = 107/556 (19%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A   FI  +  P +L  ++   V++  E YG   + +  KV IEF S N   P H GH R
Sbjct: 146 ANGSFIQFFFKPQFLFNVVVPDVLTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLR 205

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGY 200
             ++G  L++L    G+EV R  Y+ D G Q   LA+  F +Y  ++AL  +    P  +
Sbjct: 206 STIIGGFLSNLYEKMGWEVIRMNYLGDWGKQFGLLAVG-FEKYGSEEALEKD----PINH 260

Query: 201 YPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIR---------- 246
              VY++ V K++  +  S    E  N     +   ++D   +A+ KI +          
Sbjct: 261 LFDVYVR-VNKDIEQEGDSLPLEESTNGRARAYFKKMEDGDPEAL-KIWQKFRELSIQKY 318

Query: 247 -DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            D    LNIQ+D++  E    +     + + +     +G  +E                D
Sbjct: 319 IDTYARLNIQYDVYSGESQVKK---ESMENALKLFQEKGLTHE----------------D 359

Query: 306 RKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
           +  +L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV+      +
Sbjct: 360 KGAILIDLTKFNKKLGKTIVQKSDGTTLYLTRDVGAAMDRYEKYKFDKMIYVIACQQDLH 419

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +   +   +  K A       E +     GM   MS R G  + L ++++E       
Sbjct: 420 TAQFFEILKQMGHKWA-------ENLHHVNFGMVQGMSTRKGTVVFLDNILEETKEKMHE 472

Query: 424 FMMLWRKN-------------SELLDFDFCKVKE-QSKE--NPVF--------------Y 453
            M   RKN             ++L+      +++ Q+K   N  F              Y
Sbjct: 473 VM---RKNEVKYAQVENPDEVADLVGISAVMIQDMQAKRINNYEFKWERMLSFEGDTGPY 529

Query: 454 VQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           +QYA++R RS+ R A +I P+     DF +            + + + L+  LA+YP V+
Sbjct: 530 LQYAHSRLRSVERNASEITPEKWVTADFSVLT----------EAAAVTLVRLLAQYPDVL 579

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            NA    EP  +  YL+ L       +        + +V     ++   RL L  +   +
Sbjct: 580 RNALKTHEPATIVTYLFKLTHQVSSCYD-------ILWVAGQAPEVATARLALYASCRQV 632

Query: 570 INSGLNIIGVESPNEM 585
           +N+G+ ++G+   + M
Sbjct: 633 LNNGMRLLGLTPVDRM 648


>gi|325204484|gb|ADY99937.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 572

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDA 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DSAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|261365442|ref|ZP_05978325.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566109|gb|EFC87669.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 572

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/589 (21%), Positives = 241/589 (40%), Gaps = 86/589 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHT-ALNDTRFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 ++ ++D+L ++G   E                D  +++F       D +     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKDGEPAAFI 302

Query: 326 --KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378
             K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +        + K
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAK 362

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           A+    +     + +DG P K   R+GD + L  ++ E                      
Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAA 417

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A   
Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               ++D+    V+ +       E QL   L ++  V+++      P+ LA YLY  A++
Sbjct: 475 ----EWDVTAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATL 525

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           F   +      P L+   A        RLQL       +  GL+++G++
Sbjct: 526 FSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|75909766|ref|YP_324062.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|109894972|sp|Q3M769|SYR_ANAVT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|75703491|gb|ABA23167.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 588

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 142/596 (23%), Positives = 239/596 (40%), Gaps = 100/596 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N A+ LS+ LG  P  IA  IV ++ +    ++  IAG GFINL L  +YL   L
Sbjct: 40  GDYQANVALSLSKKLGQPPRAIASAIVEKLDVSEICETPEIAGPGFINLKLKTAYLEAQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++I       G        +  ++F S N    MHVGH R  ++GD++A ++ F G++V 
Sbjct: 100 NAIQADS-RLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVL 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--- 219
           R  ++ D G Q   L                           YL+ V  E     ++   
Sbjct: 159 RLNHVGDWGTQFGMLI-------------------------TYLREVSPEALTTANALDI 193

Query: 220 -ELLNFPEEKWLPIVKDYSVQ--AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRD 275
            +L++F  +       D + Q  A  +++R    A +  H    + E    R +   I D
Sbjct: 194 GDLVSFYRQAKQRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQS--RQEFQVIYD 251

Query: 276 IID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-----PLL--KS 327
           ++D  L  +G  +   L P   +  +   +  +    +   +    +R     PL+  KS
Sbjct: 252 LLDVKLTERGESFYNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKS 311

Query: 328 DGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG Y Y   DLA  + + ++     ++YV  +  + +  +   VA     +KA       
Sbjct: 312 DGGYNYATTDLAALRYRIQKDEAKRIVYVTDAGQANHFAQFFQVA-----RKAGWIPNDV 366

Query: 387 ELVR------LYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           ELV       L  DG   K   R+GD + LR ++DE                        
Sbjct: 367 ELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDEAVSRAHADLEERLKAEEREETPEF 424

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    F + K+ +  K N   Y+ YAYAR + I R+  
Sbjct: 425 IDKVAEVVGISAVKYADLSQNRTSNYIFSYDKMLD-LKGNTAPYMLYAYARIQGISRKGG 483

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F DL  +   + ++  ++EF      L  +L +   VI        P +L  YLY+L+
Sbjct: 484 INFADLGDN--AKVILQHDTEF-----ALAKYLLQLGEVISTVEADLLPNRLCEYLYELS 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+  +     N  ++ + A    L   RL L    A  +  GL+++G++    M
Sbjct: 537 KKFNTFYDR---NQGVQVLSAEE-PLRTSRLVLCDLTARTLKLGLSLLGIQVLERM 588


>gi|86147649|ref|ZP_01065958.1| arginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218710198|ref|YP_002417819.1| arginyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782991|sp|B7VI24|SYR_VIBSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85834560|gb|EAQ52709.1| arginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218323217|emb|CAV19394.1| Arginyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 577

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 238/610 (39%), Gaps = 136/610 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D     V IAG GF+N++L  ++L +  
Sbjct: 37  GDYQANGIMGVAKRLGTNPREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDETFLAQQA 96

Query: 103 ------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
                 S + VS  E           +  ++ + N    MHVGH R  ++GD +   + F
Sbjct: 97  DAALADSRLGVSAAE--------AQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEF 148

Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDL- 196
            G++V R  +I D G Q   L                    L  F+R  + LY+ D +  
Sbjct: 149 LGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLYDEDEEFA 208

Query: 197 --PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
               GY        V  +  D Y +E+       W  +V    VQ      R +   +++
Sbjct: 209 VKARGYV-------VKLQGGDAYCAEM-------WKKLVDVTMVQNQRNYDRLN---VSL 251

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312
             D  + E  ++      + +I+ +L  QG   E                D  Q++F   
Sbjct: 252 TRDDVMGESMYNH----MLSNIVSDLQTQGLAKES---------------DGAQVVFLDE 292

Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363
                GD +   + K DG + Y   D+A  K ++E  G D ++Y + S    +       
Sbjct: 293 YKNKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELGADRVLYFIDSRQHQHLMQAWTI 352

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +
Sbjct: 353 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRATQ 404

Query: 424 FMMLWRKNSELLD--------------FDFCKVKEQSKENPVF--------------YVQ 455
             ++  KN EL +                +  + +    + VF              Y+Q
Sbjct: 405 --LIESKNPELAEDEKKTIANTVAMAAVKYADLSKHRTTDYVFDWENMLAFEGNTAPYMQ 462

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R  SIF +A      L+ ++     I +E      E  LI  L ++   +++    
Sbjct: 463 YAYTRVASIFAKAGISMDSLEGEI----KITEE-----KEKALIAKLLQFEEAVQSVARE 513

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ +  YL++LA  F   +           + A +  +   RL+L    A  I  GL+
Sbjct: 514 GQPHIMCSYLFELAGQFSSFYE------ACPILVAEDETVKQSRLKLAALTAKTIKQGLS 567

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 568 LLGIETLERM 577


>gi|146305572|ref|YP_001186037.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166232824|sp|A4XPN9|SYR_PSEMY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145573773|gb|ABP83305.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 579

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 239/572 (41%), Gaps = 85/572 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +AE ++A +  D  +  V IAG GF+N 
Sbjct: 30  IQVENTKDKSHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADAGIAKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L + L + +    + G +  G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNSDALAQRLEAALADA-QLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVG 210
            ++ F G  V R+ ++ D G Q   L L+       A  +  +DL EG+Y     +    
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML-LAYMQENPAAAESELADL-EGFYRAAKKRFDES 206

Query: 211 KELADKYSSEL---LNFPEEKWLPIVKDYS------VQAMMKIIRDDLKALNIQHDIFIS 261
            E AD+ + EL   L   + + L +   ++       QA+   +   L   +++ +   +
Sbjct: 207 PEFADR-ARELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYN 265

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           +D         +  ++ +LA +G + E           Q   MD     F++   G+ + 
Sbjct: 266 DD---------LPQVVADLAAKGLLTE-------DNGAQCVFMDE----FKNAE-GNPLP 304

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
             + K+ G Y Y   DLA    +Y  G    D ++Y +    + + + + A A       
Sbjct: 305 LIVQKAGGGYLYATTDLA--ATRYRAGVLKADRVLYFVDQRQALHFQMVFACARLAGFVP 362

Query: 379 AQINVLLCELVRL---------YRDGMPIKM-------SKRAGDFIT----------LRH 412
           A + +       +          RDG  +K+        +RA + +           LR 
Sbjct: 363 ASMELEHMGFGTMNGPDGRPFKTRDGGTVKLVQLLDEAEQRAYELVKSKNPELAEDELRR 422

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   VG  SV++  L +  +    F+F  +    + N   Y+ YAY R   +FR+   + 
Sbjct: 423 IARVVGIASVKYADLSKHRASDYSFNF-DLMLSFEGNTAPYLLYAYTRVAGVFRK---LG 478

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             +D ++  R  +  E      E  L   LA++  ++ +      P+ L  YLYDLA +F
Sbjct: 479 KGID-EIGGRIALVAE-----QEQALAAKLAQFGELLASVADKGTPHMLCSYLYDLAGLF 532

Query: 533 HGHWSH---------GRENPRLRFVQANNRKL 555
              + +            + RLR      R L
Sbjct: 533 SSFYENCPILAAEDEATRDSRLRLTALTGRTL 564


>gi|325695318|gb|EGD37218.1| arginine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 562

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D++             D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDLE-------------DFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAAATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|159030666|emb|CAO88336.1| argS [Microcystis aeruginosa PCC 7806]
          Length = 585

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 238/584 (40%), Gaps = 91/584 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N ++ L++ L   P  +A  ++  ++ID       IAG GFINL L P YL   L
Sbjct: 40  GDYQCNISLSLAKELKQKPREVAATLLKNLEIDDLCQPPEIAGPGFINLTLKPGYLETQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++      G        K+ ++F S N    MHVGH R  ++GD +A ++ F  ++V 
Sbjct: 100 KDLITDN-RLGVATANPSQKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRHHQVI 158

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  ++ D G Q   L   +   Y  AL   D+ L  G     Y K      A     E  
Sbjct: 159 RLNHVGDWGTQFGMLITYLQEAYPSALTQADA-LDLGDLVSFYKK------AKIRFDEDE 211

Query: 223 NFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272
           NF E     +VK  S         Q + +  R + + +    DI ++E    RG+   +P
Sbjct: 212 NFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILDIKLTE----RGESFYNP 267

Query: 273 -IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +  +I  L +QG + E  G L       T K               GD +   + KSDG
Sbjct: 268 YLETVIRELEQQGLLIEDNGALCVFLDGFTNK--------------EGDPLPLIVKKSDG 313

Query: 330 SYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            Y Y   DLA   ++ + ++  + +IYV  +  + +  ++  VA         + V+   
Sbjct: 314 GYNYATTDLAAICYRVREDKA-ERIIYVTDAGQANHFAQVFQVAKKAGFLPDNVAVVHVA 372

Query: 388 L-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------ 416
             + L  DG   K+  R+G+ + L+ ++D+                              
Sbjct: 373 FGLVLGEDGK--KLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIANTAE 430

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    F + K+    + N   Y+ YAYAR +SI R+    F DL
Sbjct: 431 TVGLSAVKYADLSQNRNSNYVFSYDKML-NLQGNTAPYMLYAYARVQSISREGGINFQDL 489

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             +     +I +    D SEL L   L + P VI        P +L  YLY+L+  ++  
Sbjct: 490 SAN---SPLILK----DESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRF 542

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +    P L+  +     +   RL L    A  +  GL+++G+
Sbjct: 543 YENC---PVLKAAEP----IKTSRLVLCDLTARTLKLGLSLLGI 579


>gi|227355376|ref|ZP_03839777.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227164600|gb|EEI49471.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 576

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 139/601 (23%), Positives = 235/601 (39%), Gaps = 119/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE I+  + I    D V IAG GFIN++LSP ++ +  
Sbjct: 37  GDYQANGVMGAAKKMGIPPRQLAEKILEHLDITDIADKVEIAGPGFINIFLSPVWVAQ-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +   ++        +   T V I++ S N    MHVGH R  ++GD  A  ++F G+ V 
Sbjct: 96  AEFALADEHLNITKVTPETIV-IDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHLGDWGTQFGMLIAYLEKKQNENAADMALADLEEFYREAKKCYDEDEVFAERARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G    D+Y   +       W  +V     Q  +   R     LN+     ++EDD
Sbjct: 215 VRLQGG----DEYCRTM-------WRKLVDITMQQNQLTYQR-----LNVT----LTEDD 254

Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              G+   +P +  I+ +L  +G   E      +  T    D  + +        G+ + 
Sbjct: 255 I-MGESLYNPMLPGIVADLKAKGLAVES-----EGATVVFLDEYKNK-------EGEPMG 301

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHS------GYVKRLEAVAAA 373
             + K DG Y Y   D+A  K ++E+   N +  Y+    H         V++   +  +
Sbjct: 302 VIIQKKDGGYLYTTTDIACAKYRHEQLHANRVLYYIDSRQHQHLMQAWTIVRKAGYIPDS 361

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
           +S +     ++L       +DG P K   R+G  + L  ++DE                 
Sbjct: 362 MSLEHHMFGMMLG------KDGRPFK--TRSGGTVRLTDLLDEAHERALTLIREKNPDMD 413

Query: 417 ----------VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                     VG  +V++  L +  +   + D+D     E    N   Y+QYAY R  SI
Sbjct: 414 EEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYMQYAYTRVASI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F++A     ++D     + +    S     E QL + L ++   I        P+ +  Y
Sbjct: 471 FKRA-----EIDESALTQPI----SLTQPHEKQLALRLVQFDETITQVAREGTPHVMCAY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LYDLA  F G + +         + A +  +   RL+L    A  +  GL  +G+E+ + 
Sbjct: 522 LYDLAQSFSGFYEN------CPILSAEDDNVRQSRLKLARLTARTLKQGLETLGIETVDR 575

Query: 585 M 585
           M
Sbjct: 576 M 576


>gi|188585877|ref|YP_001917422.1| arginyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350564|gb|ACB84834.1| arginyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 566

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 240/567 (42%), Gaps = 93/567 (16%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118
           +P  IA  IV  I+      ++   G  +IN   +   L +  L  I   G  YG++  G
Sbjct: 52  NPAQIASEIVENIEAGEYFSAIEATGP-YINFTCNLEKLNQDTLERIYTQGRGYGKSSEG 110

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTL 177
            G  V I+F S N   P   GH R  V+G++LA++    GY V R  ++ D G Q  N +
Sbjct: 111 DGKTVVIDFSSPNIAKPFGFGHLRSTVIGNSLANVYETLGYNVERINHLGDWGTQFGNLI 170

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADKYSSELLNFPE-----E 227
           A  + W  +Q L  +    P  Y   +Y+K H   E    L D+         E     E
Sbjct: 171 AAYLKWGNEQELEKD----PIEYLYDLYVKFHEEMEEDPSLKDEGREWFRKLEEGDETAE 226

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K     ++ S++   +I R     L ++ D    E  ++      + D I+ +   G   
Sbjct: 227 KLWEWFREMSLKDFERIYR----KLGVKFDSNKGEAFYN----DKLEDTIETIKDSGIA- 277

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY 345
                   S+     D++ + L             P L  K DG+  Y   DL     +Y
Sbjct: 278 ------TYSQGALIVDLNEENL------------PPCLLKKQDGATLYITRDLTAAFYRY 319

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKR 403
           E   FD  +YV+G+D   +  ++  V   +    A+ +  +   L+R        KMS R
Sbjct: 320 ENYQFDKALYVVGADQELHFNQMFNVLKKMGCDWAENMEHVPFGLIRF----QDRKMSTR 375

Query: 404 AGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFD 438
            G+ + L  V+++                         VG  +V F  L     + ++FD
Sbjct: 376 KGNMVYLEDVLEKAKQLALETIREKNPELDNQEDIAEMVGVGAVIFGDLSNDRVKEVNFD 435

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + K+ + + E    Y+QY +AR  S+ ++A DI P+ D D+    V   +S+++ + +QL
Sbjct: 436 WDKILDFNGETAP-YLQYTHARICSVLKKA-DITPEYDKDI----VKHLQSDYEKNVIQL 489

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              LA +   ++    A +P+ LA YL DL   F+  ++H    P L   +    ++   
Sbjct: 490 ---LAGFTDALKRTRDANKPHILARYLLDLGREFNRFYNHC---PILNETE----EVKQA 539

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L+ AV  ++ +GL I+G+++P  M
Sbjct: 540 RLILIDAVRQVLANGLGIMGIKAPEAM 566


>gi|254229698|ref|ZP_04923107.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937743|gb|EDN56592.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 545

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 231/610 (37%), Gaps = 136/610 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 5   GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 64

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  + K     I  ++ + N    MHVGH R  ++GD +   + F G++
Sbjct: 65  DAALADE----RLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 120

Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201
           V R  +I D G Q   L                    L  F+R  + LY+ D +      
Sbjct: 121 VIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKAR 180

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNI 254
             V     G    D+Y +E+       W  +V    +Q         + + RDD+   ++
Sbjct: 181 NYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 229

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF--- 311
            +D+              +  I+ +L  QG   E                D  Q++F   
Sbjct: 230 YNDM--------------LPKIVADLKEQGLAVED---------------DGAQVVFLDE 260

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363
                G+ +   + K DG + Y   D+A  K +YE    D ++Y + S    +       
Sbjct: 261 YKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWTI 320

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +
Sbjct: 321 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ 372

Query: 424 FMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQ 455
             ++  KN EL           +     K  + SK                  N   Y+Q
Sbjct: 373 --LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQ 430

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R  SIF +A      L  D+            D  E  LI  L ++   +++    
Sbjct: 431 YAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVARE 481

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ +  YL++LA  F   +           + A +  +   RL+L    A  I  GL+
Sbjct: 482 GQPHIMCSYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLS 535

Query: 576 IIGVESPNEM 585
           ++G+++   M
Sbjct: 536 LLGIDTLERM 545


>gi|262394871|ref|YP_003286725.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338465|gb|ACY52260.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 577

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 136/610 (22%), Positives = 231/610 (37%), Gaps = 136/610 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + +       R  + K     I  ++ + N    MHVGH R  ++GD +   + F G++
Sbjct: 97  DAALADE----RLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 152

Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201
           V R  +I D G Q   L                    L  F+R  + LY+ D +      
Sbjct: 153 VIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKAR 212

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNI 254
             V     G    D+Y +E+       W  +V    +Q         + + RDD+   ++
Sbjct: 213 NYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312
            +D+           P     I+ +L  QG   E                D  Q++F   
Sbjct: 262 YNDML----------PK----IVADLKEQGLAVED---------------DGAQVVFLDE 292

Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363
                G+ +   + K DG + Y   D+A  K +YE    D ++Y + S    +       
Sbjct: 293 YKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWTI 352

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +
Sbjct: 353 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ 404

Query: 424 FMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQ 455
             ++  KN EL           +     K  + SK                  N   Y+Q
Sbjct: 405 --LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQ 462

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R  SIF +A      L  D+            D  E  LI  L ++   +++    
Sbjct: 463 YAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVARE 513

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ +  YL++LA  F   +           + A +  +   RL+L    A  I  GL+
Sbjct: 514 GQPHIMCSYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLS 567

Query: 576 IIGVESPNEM 585
           ++G+++   M
Sbjct: 568 LLGIDTLERM 577


>gi|325689182|gb|EGD31189.1| arginine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 562

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARVQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|309378705|emb|CBX22655.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 572

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 125/592 (21%), Positives = 242/592 (40%), Gaps = 92/592 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLARNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263
             AD     +  L   +E  L + K +        QA+   +   L   ++  +   ++D
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLHPEDVAGESKYNDD 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                    ++ ++D+L ++G   E                D  +++F        G+  
Sbjct: 264 ---------LQAVVDDLVQKGLAVED---------------DGAKVVFLEEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375
              + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +        
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
           + KA+    +     + +DG P K   R+GD + L  ++ E                   
Sbjct: 360 DAKAE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAD 414

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A
Sbjct: 415 EAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKA 473

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                   +D     V+ +       E QL   L ++  V+++      P+ LA YLY +
Sbjct: 474 G------KWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQI 522

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           A++F   +      P L+   A        RLQL       +  GL+++G++
Sbjct: 523 ATLFSRFY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|326407574|gb|ADZ64645.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 564

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 140/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+    G L+   A  L++ L   P  IA  I    KID       IA   ++N +
Sbjct: 27  IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   +   +++  ++  G  YG   IG+G  V I+  + N   P  +GH R  V+GD++A
Sbjct: 84  LDKNATASEVIREVLTEGEHYGDANIGQGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209
            +    GY+  +  ++ D G Q   L ++ + +Y  +  +  N  D     Y  +  +  
Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202

Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                D+   +    +   +E+ L I K +S  ++++  R   + L +  D F+ E  + 
Sbjct: 203 EDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNR-IYRKLGVSFDHFMGESFY- 260

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 +  I+++L  +  ++E       SK     D+++  L             P L 
Sbjct: 261 ---SDKMDAIVEDLESKNLLHE-------SKGALIVDLEKYNL------------NPALI 298

Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379
            K+DG+  Y   DL   AY K  +   F   +YV+G + + + K+L+AV   A       
Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
            ++V    + +  +     K S R G  + L   +DE                       
Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +V+F  L    +   DFD  + V  + +  P  YVQYA+AR +SI R+A     
Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +D +     V       D    +++  L E+P V++ A    EP  +A Y   LA  F+
Sbjct: 467 KVDINNISLAV------SDAEAWEIVKALKEFPNVVKRAADNYEPSVIAKYAISLAQAFN 520

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R       +  ++ +L   RL L+ A + ++   L ++GV +P  M
Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564


>gi|307595328|ref|YP_003901645.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550529|gb|ADN50594.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 643

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 149/629 (23%), Positives = 266/629 (42%), Gaps = 123/629 (19%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRK 100
           +G+L+     I+     +D + I + I+ ++K+   ++ V +   G++N+ ++ + Y   
Sbjct: 41  YGYLAIPMHSIVREHGNIDEI-INQKIIPQLKL---INKVVLV-NGYLNIDININDYANI 95

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +L SI   G +YG +         IE  SANP  PMH+GH R AV+GD+LA L+ F G  
Sbjct: 96  VLLSISNLGDKYGLSDKCPTGSYIIEHTSANPAKPMHIGHGRNAVLGDSLARLLRFCGAS 155

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP----GVY---------LK 207
           V   +Y+ND G Q+  + +  +      L    S +  G+ P    G+          +K
Sbjct: 156 VKVHFYVNDCGDQMPYVGIGYYVAKDLVL----SRINGGWKPDEVMGIIYSVTYAVSEIK 211

Query: 208 HVGKELAD-----KY-SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + K++       KY  +  L    ++W+ ++ ++ ++   ++    LK L    D+ + 
Sbjct: 212 RLSKQIEQLKNEGKYDDANKLIGERDEWVSVINNF-IEKDKELTEALLKGLGKFEDLPLM 270

Query: 262 EDDFHR----GDP---SPIRDIID--------NLARQGYVYEG----------------I 290
              + R    GD      IR+ +D         L R G V++                 +
Sbjct: 271 VKQWSRAYEEGDEFVRKVIREAVDVVLTGFRITLDRLGVVFDSWDFESEVAVDNGGVSRV 330

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-------------RPLLKSDGSYTYFAAD 337
           +     +  Q  + D   L+FR+     D++               LL+SDG+  Y   D
Sbjct: 331 INELLRRAPQYMERDNGALVFRADKYAQDLNLWDELKLPRYIPKATLLRSDGTSLYLTRD 390

Query: 338 LAYFKCKYER-GFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +AY    ++   FD +I V+GS+  H     RL   A    E   ++     E+V L   
Sbjct: 391 IAYALWFWDNFKFDKLIRVIGSEQAHPQAQLRLALHAMGYHELARKLIHYSYEMVNL--A 448

Query: 395 GMPIKMSKRAGDFITLRHVVDE------------------------VGSDSVRFMMLWRK 430
           GM  KMS R G +++L  +++E                        V   ++R+  L   
Sbjct: 449 GM--KMSGRKGIYVSLDELLNEAKDRVMEIVKGRFPPDEADKVAEAVAVGAIRYSFLSVS 506

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            ++ L F + KV    ++N   +VQY Y R   I  +A ++ P L     P N+  +E E
Sbjct: 507 PNKPLTFSWDKVL-NLRQNSGPFVQYTYVRTNGILEKAGEV-PKL--TQIPNNIASEEKE 562

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
                  L + L EYP VI  A        +  Y+  L+ VF+ ++    + P L     
Sbjct: 563 -------LTLLLGEYPEVIAKAAQELRLENIIEYVNKLSLVFNSYYE---KYPVLNAEPG 612

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGV 579
               +   R+ LV+AV +++ + ++I+G+
Sbjct: 613 ----IREFRINLVNAVRTVLGNAMDILGI 637


>gi|229004905|ref|ZP_04162633.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228756349|gb|EEM05666.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
          Length = 562

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 143/611 (23%), Positives = 251/611 (41%), Gaps = 133/611 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG---FI 89
           +IE P+    G  +    M L++     P  IA+ I  ++      +S F   K    ++
Sbjct: 27  LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKLN-----NSFFTKVKAVGPYV 80

Query: 90  NLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N++ +   +   +L +I+V   EYG+   G+   V I++ S N   P  +GH R  ++G+
Sbjct: 81  NVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPNIAKPFSMGHLRSTMIGN 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +L  +    GYEV    YI D G Q   L  +    Y++  + N+  + E     ++  +
Sbjct: 141 SLKHIAEKCGYEVVGINYIGDWGTQFGKLITA----YKK--WGNEELVKEDPIRELFKLY 194

Query: 209 VGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFI 260
           V       +  E+  +PE       W   ++D   +A+        + LK  +  +++  
Sbjct: 195 V------HFHEEVKEYPELEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLG 248

Query: 261 SEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            E    +G+      + D +D L  +G + E       S   Q  +++++ +        
Sbjct: 249 VEFTNFQGEAFYNDKMGDFVDILEEKGLLEE-------SDGAQVVNLEKEDM-------- 293

Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                P L  KSDG+  Y   DL    Y +  YE  FD  +YV+G++ S +  +   V  
Sbjct: 294 ----PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLK 347

Query: 373 AVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAG----------------------- 405
            +     +  A +   L     + +DG   KMS R G                       
Sbjct: 348 KLGYNWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAITLAEQNIEEK 400

Query: 406 --DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462
             D      V  +VG  +V F  L  +    ++F   K +K + +  P  YVQY +AR  
Sbjct: 401 NPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQYTHARAC 458

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL--------IVHLAEYPRVIENATI 514
           SI R+                   + +EF+T   QL        I  L  +P+V+E A  
Sbjct: 459 SILRK-------------------ENAEFETEAFQLNDDHSWSTIKLLNRFPQVVETAFF 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A YL D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL
Sbjct: 500 KNEPSHIAKYLLDVAQAFNKYYGN------VRILEEDKEKES--RLALVYAVTIVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++G+ +P EM
Sbjct: 552 RLLGMGAPEEM 562


>gi|262037521|ref|ZP_06010980.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748451|gb|EEY35831.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 575

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 137/599 (22%), Positives = 257/599 (42%), Gaps = 93/599 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ I+           TN A+I S+ +  +P  IA  I  + + +  +D   I   GF+N
Sbjct: 26  KVEIQYSSKKEFADFQTNFALINSKIIEKNPREIAAEIADKFEDNDIIDKFEITDPGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNL--IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +Y+  S   KI+  +    I  G+ +  I    K  I++ S N    MH+GH R  ++GD
Sbjct: 86  IYIKNS---KIIEEL--KKIGEGKYIFPIDTSKKTIIDYSSPNIAKRMHIGHLRSTIIGD 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLK 207
           +L  ++ + G++V  + ++ D G+    L +    W  ++    N    P G    +Y+K
Sbjct: 141 SLKRILEYVGFKVLGDNHLGDWGSHFGKLIVGCNKWLDEEEYKKN----PIGELERIYIK 196

Query: 208 HVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
              +       E++ K   E L   +++ + + K++ V+  +K        LN++ D++ 
Sbjct: 197 FSDEAQLNPELEVSAKEEWEKLKARDKENVKLWKNF-VKCSLKEFEKVYNILNVKFDMYN 255

Query: 261 SEDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPP--PKSKTTQKCDMDRKQLLFRSTMV 316
            E  +    P    +I+++L  +    + +G+L     K +    C + RK         
Sbjct: 256 GESFYAEMIP----EILESLKNKKIAVLDDGVLTVYFAKEEKITPCILQRK--------- 302

Query: 317 GDDVDRPLLKSDGSY-TYFAADLAYFKCKYE-RGFDNMIYVMGS---DHSGYVKRLEAVA 371
                      DG+Y +Y + DLA  K + +    +N IYVM     +H   V ++  +A
Sbjct: 303 -----------DGNYISYPSTDLATIKYRKDVLNIENAIYVMDERPKEHFRQVFKISEMA 351

Query: 372 A---AVSEKKAQINVLLCE--LVRLYRDGMPIKM-------SKRAGDFITLRH------- 412
               A  +      ++  E  ++    +G  I++        K A   I LR+       
Sbjct: 352 GKEYAYEKTHVWFGIMRFEDDIISSATEGNNIRLINILEQAVKEAEKIIDLRNPDLSEKE 411

Query: 413 ---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
              +   VG  +V++  L +     + F + KV    +EN   Y+QY Y R  SIFR+ K
Sbjct: 412 KKEIGKIVGIGAVKYFDLSQNRMTPISFSWDKVL-NFEENTSPYLQYTYVRIMSIFRKIK 470

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +   ++D++   R +      F+  E +L   L ++P  +  A  A +P  +A YL++ A
Sbjct: 471 E--NNIDYNKNYRQI---SENFNGEERELATALLKFPYSVMKACEAYKPNLIADYLFETA 525

Query: 530 SVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F+  ++     +E  + RF          M+L L    A II  GL ++G++    M
Sbjct: 526 KIFNTFYATESILKEEDKSRF---------YMKLLLAEKTAYIIKEGLQLLGIDVVERM 575


>gi|290475235|ref|YP_003468121.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174554|emb|CBJ81348.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 576

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 245/596 (41%), Gaps = 109/596 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE +++++ +      + IAG GFIN++L  +++   +
Sbjct: 37  GDYQANGVMAAAKKVGMPPRQLAEKVISQLDLQGIASKIEIAGPGFINIFLDKAWIAANI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  +   + G   +   T V I++ + N    MHVGH R  ++GD  A  + F G++V 
Sbjct: 97  ET-ALKDEKLGITPVEPQTIV-IDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVI 154

Query: 163 REYYINDAGAQI---------------NTLALS---VFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q                N +AL+    F+R  +  Y+ D +        V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKIQNEDANDMALADLEAFYREAKKHYDEDEEFAIRARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y  E+       W  +V     Q      R  L     + D+ + E  
Sbjct: 215 ----VKLQGGDEYCREM-------WRKLVDITMSQNQQTYNR--LNVTLTEKDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P     I+ +L ++G          KS       +D     F++   G+ +   +
Sbjct: 261 YNDMLPG----IVADLKQRGIAV-------KSDGATVVYLDE----FKNKE-GEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            K DG Y Y   D+A  K ++E      ++Y   S    ++ +    A A+  K   I  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRHETLNASRVLYYTDSRQHQHLMQ----AWAIIRKTGYIPA 360

Query: 384 -LLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +L E     + L +DG P K   RAG  + L  ++DE                      
Sbjct: 361 SMLLEHHMFGMMLGKDGKPFKT--RAGGTVRLSDLLDEAIERADTLIREKNPDMPEDELK 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF++A   
Sbjct: 419 KIVEAVGIGAVKYADLSKSRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVSSIFKRA--- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLA 529
             D+D +     V+  E      E  L   L ++   I   T+A+E  P+ +  YLYDLA
Sbjct: 475 --DIDENNLTLPVMLNEER----EQALATRLLQFEETI--TTVAREGTPHVMCAYLYDLA 526

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F G + H         + A++ +L   RL+L    A  +  GL+ +G+++   M
Sbjct: 527 GLFSGFYEH------CPILNADSEELRQSRLKLALLTAKTLKQGLDTLGIQTVERM 576


>gi|157373673|ref|YP_001472273.1| arginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083550|sp|A8FQM2|SYR_SHESH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157316047|gb|ABV35145.1| Arginine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 581

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 139/605 (22%), Positives = 234/605 (38%), Gaps = 102/605 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ ++R +D  HG  +TN AM+L++    +P  +A+LI+  +  D  V  V IAG GFIN
Sbjct: 29  RVQVDRTKDKTHGDFATNLAMMLTKVARKNPRELAQLIIDSLPQDSQVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L +  ++    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDENALASQLMA-ALNDDHLGIQLPEPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190
              + F G+ V R+ ++ D G                    AQ+    L  F+R  +  +
Sbjct: 147 VRALEFQGHNVIRQNHVGDWGTQFGMLLAYMEELRAENGEQAQMELSDLETFYRAAKVRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR---- 246
           +   D        V     G E  +K   E  +        + +   V    K +R    
Sbjct: 207 DESEDFAIRARKLVVSLQSGDEYCNKLWREFNDISLSHCHDVYERLGVSLTRKDVRGEST 266

Query: 247 --DDLKAL--NIQHDIFISE---------DDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             DDL+ +  ++     +SE         D+F   D  P+  II   A  GY+Y      
Sbjct: 267 YNDDLEQVVKDLDAKGLLSESNGAKVVFQDEFKTKDGDPLPVIIQK-ADGGYLY------ 319

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDD-----VD-------RPLLKSDGSYTYFAADLAYF 341
                      D   + +RS ++  D     VD       + + K   +  +   D++  
Sbjct: 320 --------ATSDLAAMRYRSNVLKADRALYFVDLRQGLHFQQVFKLARTAEFINPDMSL- 370

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                 GF  M    G D   +  R   V   V +   + +    ELVR     M     
Sbjct: 371 ---EHMGFGTM---NGDDGRPFKTRSGGVVKLV-DLLTEADTRALELVRSKNPDM----- 418

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
               D   L  +   VG  SV++  L +  +    F F ++    + N   Y+ YAY R 
Sbjct: 419 ----DQAELEKIAKVVGISSVKYADLSKNRASDYIFSFEQMLS-FEGNTAPYLLYAYTRV 473

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520
             IF++A DI           ++   + + D   E  L   LA++  V+       +P+ 
Sbjct: 474 AGIFKRATDI-----------DLSDAKMQLDHDKEKDLGNKLAQFGEVLSRMVTKGQPHA 522

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YL++LA  F   +           + A + +    RL L    A  +  GL+++G+E
Sbjct: 523 LCGYLFELAGAFSSFYE------ACPVLAAESEEQKKSRLLLSQLTAKTLKQGLDLLGIE 576

Query: 581 SPNEM 585
           +   M
Sbjct: 577 TLERM 581


>gi|307130871|ref|YP_003882887.1| arginyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528400|gb|ADM98330.1| arginyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 576

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 134/609 (22%), Positives = 240/609 (39%), Gaps = 115/609 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG+ P  +AE ++  +++D       IAG GFIN++
Sbjct: 27  MVRQSAKAQFGDYQANGIMAAAKKLGMAPRQLAEKVLQTLQLDGIAAKTEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P +L   L    ++  + G + +   T V +++ + N    MHVG+ R  ++GD    
Sbjct: 87  LAPQWLSGQLEH-ALTAPKLGVSAVEPQTIV-VDYSAPNVAKEMHVGNLRSTIIGDASVR 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDS 194
            + F G+ V R  ++ D G Q   L                   L  F+R  +  Y++D+
Sbjct: 145 TLEFLGHNVIRANHVGDWGTQFGMLIAHLEDVQNGNTSDLELADLEAFYREAKKHYDDDA 204

Query: 195 DLPE---GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              E   GY        V  +  D+Y   +       W  +V    VQ      R +   
Sbjct: 205 VFAERARGYV-------VKLQSGDEYCRSM-------WRKLVDITMVQNQRSYDRLN--- 247

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +++  +  + E  ++   P    +I+ +L  +G   E       S+      +D  +   
Sbjct: 248 VSLTPNDVMGESLYNAMLP----EIVADLKAKGLAVE-------SEGAIVVYLDEYK--- 293

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363
                G+ +   + K DG Y Y   D+A  K +YE+ G   ++Y + S    +       
Sbjct: 294 --NKEGEAMGVIIQKKDGGYLYTTTDIACAKYRYEKLGASRVLYYIDSRQHQHLMQAWSI 351

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
           V++   V  +VS +     ++L       +DG P K   RAG  I L  ++DE       
Sbjct: 352 VRKAGYVPESVSLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYERALT 403

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               V   +V++  L +  +    FD+  +    + N   Y+QY
Sbjct: 404 LIAGKNPEMERGELEQLAQVVSVGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQY 462

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           AY R  SIF++A      L     P  +  +       E  L   L ++   +       
Sbjct: 463 AYTRVSSIFKRAGVEEASLT---QPITLTAEH------EQALATRLLQFEETVTTVARDG 513

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+ +  YLYDLA +F G + +         + A+N      RL+L    A  + +GLN 
Sbjct: 514 TPHVMCAYLYDLAGLFSGFYEN------CPILNADNDGTRQSRLKLALLTAKTLKTGLNT 567

Query: 577 IGVESPNEM 585
           +G+++  +M
Sbjct: 568 LGIQTVEKM 576


>gi|241121693|ref|XP_002403306.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493415|gb|EEC03056.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 662

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 248/596 (41%), Gaps = 102/596 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    NAAM LS+ L      + P+ +A+ IVA +  +  V  + +AG GFIN+ LS SY
Sbjct: 116 GDYQCNAAMPLSQALKKAGKPMSPVEVAKRIVAEVPANDVVAEMSLAGPGFINVTLSGSY 175

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +      I+  G+       G   +V ++  S N    MHVGH R  ++G++L+ L+ F 
Sbjct: 176 VAASARRILTDGV-LPPPQAGPRKRVIVDLSSPNIAKEMHVGHLRSTIIGESLSRLLEFV 234

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  ++ D G Q   L   +  R+   L ++    P G     Y     KE   ++
Sbjct: 235 GHDVLRLNHVGDWGTQFGMLIAHLKDRFPDYLVHSP---PIGDLQAFY-----KESKVRF 286

Query: 218 SSELLNFPEEKWLPIVK----DYSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGD 269
            S+   F +  +  +VK    D  + +  K+I    R + + +  + D+ + E    RG+
Sbjct: 287 DSDE-EFKKRAYACVVKLQSHDPDMMSAWKLICDVSRQEFQKIYERLDVSLIE----RGE 341

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 + +++ +L  +G++ E                D ++++F     G  V   ++K
Sbjct: 342 SFYQDMMTEVVKDLDERGFLEED---------------DGRKVMFGP---GQPVPLTVVK 383

Query: 327 SDGSYTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQI 381
           SDG +TY  +D+A  +   + ER  D ++YV  +  + +   + A A     V   K ++
Sbjct: 384 SDGGFTYDTSDMATIRHRVQQERA-DWIVYVTDAGQAQHFNTIFACAKKAGYVDTSKVRL 442

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +  +  +V L  D    K   R+GD + L  ++DE    S++ +    +   L   +  +
Sbjct: 443 DHCVFGVV-LGEDKK--KFKTRSGDTVKLTDLLDEGLRRSLQKLHEKEREKVLTPEELKR 499

Query: 442 VKE----------------------------QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            +E                              + N   Y+ YA  R RSI R       
Sbjct: 500 AQEAVAYGCIKYADLSHNRVHEYVFSFDRMLDDRGNTAAYLLYALTRIRSIARNV----- 554

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +  D      +P E      E +L   L  +P VI         + L  YL++L+  F 
Sbjct: 555 GMSVDALKDEEVPVEH---PKERKLAKTLLRFPEVISTMLEELHVHPLCDYLFELSQTFS 611

Query: 534 GHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + +     ++    + V+ N       RL L  A A+++  G +I+G+++   M
Sbjct: 612 EFYDNCYCIEKDKATGQVVKVNK-----GRLLLCEATAAVMTKGFHILGIKTVERM 662


>gi|19703841|ref|NP_603403.1| arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|23822190|sp|Q8RG14|SYR_FUSNN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19713995|gb|AAL94702.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 569

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 246/581 (42%), Gaps = 88/581 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AMI S+ +G +P  IAE +         ++ + +AG GFIN++LS  Y   I 
Sbjct: 39  GDYQCNFAMINSKIIGDNPRKIAEEVKNNFPYGDVIEKLEVAGPGFINIFLSDKY---IS 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +SI   G +Y  + + +  KV I+F S N    MH+GH R  ++G++++ +  F GY+V 
Sbjct: 96  NSIKKIGEDYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESISRIYRFLGYDVV 155

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
            + +I D G Q   L +    W  ++A   N  +  E     VY+K   +      L D 
Sbjct: 156 ADNHIGDWGTQFGKLIVGYRNWLDKKAYKKNAIEELE----RVYVKFSDEAEKDPSLEDL 211

Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +EL  +   EE+   + K++  ++ +K      K L++  D +  E  ++      ++
Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D                     +    D K  LF            + K DG+Y Y 
Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310

Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K  K     + MIY+  +    + K+   +   +     + ++    ++R + 
Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+   +S R G+ I L  ++DE                           VG  SV++  
Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEGEKQNIAEVVGVSSVKYAD 425

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+ Y YAR +SI R+      +L+  L     I 
Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKV----AELNIGLNENIEIK 480

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E++ + S   L  +L  +P  +  A    +P  +A YLY+L+   +  +++    P L 
Sbjct: 481 TENKIEKS---LATYLLAFPISVLKAGETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533

Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                N+ +  +  R  L+     ++  GL ++G+   N+M
Sbjct: 534 -----NQDIETLKSRALLIKKTGEVLKEGLELLGIPILNKM 569


>gi|325969563|ref|YP_004245755.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708766|gb|ADY02253.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 643

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 245/579 (42%), Gaps = 108/579 (18%)

Query: 87  GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           G++N+ ++   Y   +LS+I     +YG +     +   IE  SANP  PMH+GH R AV
Sbjct: 81  GYLNIDINIRDYANIVLSTINSLSDKYGISEKCPSSSYIIEHTSANPAKPMHIGHGRNAV 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGV 204
           +GD+LA L+ F G  V   +Y+ND G Q+  + +  +      L   N+   P+     +
Sbjct: 141 LGDSLARLLRFCGASVRVHFYVNDCGDQMPYVGIGYYVAKDLVLNRVNNGWKPDDVMGII 200

Query: 205 Y--------LKHVGKELADKYSSE-------LLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y        +K + K++ +++ SE        L    ++W+ ++ ++ ++   ++    L
Sbjct: 201 YSVTYAVSEIKRLSKQI-EQFKSEGKYEDANKLISERDEWISVINNF-MERDKELTETLL 258

Query: 250 KALNIQHDIFISEDDFHR----GDP---SPIRDIID--------NLARQGYVYEG----- 289
           K L    D+ +    + R    GD      IR+ +D         L R G  ++      
Sbjct: 259 KGLGKFEDLPLMVKQWSRAYEEGDEFVRKVIREAVDIVLKGFRITLDRLGISFDSWDFES 318

Query: 290 -----------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-------------DRPLL 325
                      ++     K  Q  + D   ++FR+     D+                LL
Sbjct: 319 EVAVDNGGTSRVINELLRKVPQYVERDDGAVVFRADKYAQDLGLWNELKLPKYIPKATLL 378

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +SDG+  Y   D+AY    ++   FD +I V+GS+ +    +L+    A+        ++
Sbjct: 379 RSDGTSLYLTRDIAYALWFWDNFKFDRLIRVIGSEQAHPQAQLKLALHAMGYHDLARKLI 438

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------VGSD 420
                 +   GM  KMS R G +I+L  +++E                        V + 
Sbjct: 439 HYSYEMVNLAGM--KMSGRKGVYISLDELLNEAKDRIMEIVKNRFSPDEANRVAEAVATG 496

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++R+  L    ++ L F + KV    K+N   +VQY Y R   I  +A +I P L     
Sbjct: 497 AIRYSFLSVSPNKPLTFSWDKVL-NLKQNSGPFVQYTYVRTNGILEKAGEI-PKLT--QI 552

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P N+  +E E       LI+ L EYP VI  A        +  Y+  L+ VF+ ++    
Sbjct: 553 PNNIAGEERE-------LILLLGEYPEVIARAAQELRLENIIEYVNKLSLVFNSYYE--- 602

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + P L   +A  R+    R+ LV+A+ +++ + + I+G+
Sbjct: 603 KYPVLN-AEAGIREF---RINLVNAMRTVLGNAMGILGI 637


>gi|163847584|ref|YP_001635628.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525439|ref|YP_002569910.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|229558751|sp|A9WEH7|SYR_CHLAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782952|sp|B9LGY2|SYR_CHLSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163668873|gb|ABY35239.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449318|gb|ACM53584.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 574

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 145/626 (23%), Positives = 255/626 (40%), Gaps = 107/626 (17%)

Query: 11  LKNYLKEIDCKIKVEKKI---LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           L+ ++ +I   I    K+   L  I   +P   A     T  A   ++ LG+DP+ +A  
Sbjct: 5   LERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKA---AKALGVDPVRLAAD 61

Query: 68  IVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
           +   I   PD  +  V   G  F+N  L P  L   +++ I   G  YG    G    V 
Sbjct: 62  LATAIVPPPDSLIGEVTATG-AFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVV 120

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N    MHVGH R  ++G  L  +    GY V  + ++ D G Q   + L+   R
Sbjct: 121 IDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGII-LAAMQR 179

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-----EEKWLPIVK--DYS 237
           Y +     ++ + E            + L  +Y++E+ + P       +W   ++  D +
Sbjct: 180 YGRPQNEGEAAMAEL-----------EALYARYNAEMKDNPPLEDEARRWSLALEQGDPT 228

Query: 238 VQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            + + +   D  ++A    +D      D+  G+                 YE +LP    
Sbjct: 229 ARELWQWCVDLTMRAAQRNYDRLGVRFDYAYGES---------------FYEAMLPGVIE 273

Query: 297 KTTQKCDMDRKQLLFRSTMVG--DDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNM 352
           +  Q     R        +V   D + R ++ +SDG   Y   D+A  K +  E    ++
Sbjct: 274 EALQSGAAFRD---VDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKFRLQEFNPSHI 330

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL---VRLYRDGMPIKMSKRAGDFIT 409
           IYV+ +    + ++L A+  A+      ++V L  +   V    DG P  +S + G+ + 
Sbjct: 331 IYVVDARQELHFRQLFAIVRAMGYA---LDVELIHVPFGVITTPDGQP--LSTKKGNMVY 385

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  ++D+                           VG  +V +  L++     +  D+ ++
Sbjct: 386 LESLLDDAVARARALVDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRM 445

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLI 499
               + N   Y+QY++ARCRSI R+A +   +  ++D  L              SE +L+
Sbjct: 446 L-SIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEVDPGLLTH----------PSEQRLV 494

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            HLA  P  +  A     P+ +A + Y  A  F   +    + P LR   A    L   R
Sbjct: 495 RHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFE---QCPVLR---AETPALRAAR 548

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           LQLV A A+ + +GL ++G+++P  M
Sbjct: 549 LQLVSATANALRNGLALLGIQAPERM 574


>gi|219871399|ref|YP_002475774.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691603|gb|ACL32826.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 548

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 229/580 (39%), Gaps = 78/580 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ +V  + ++   + + IAG GFIN++L+P++L +  
Sbjct: 10  GDYQANGIMGAAKKLGLNPREFAQKVVDNVDLNGIAEKLEIAGPGFINIFLAPTWLAQQT 69

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +   SG + G NL  +   V +++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 70  EN-AFSGDKLGINL-NQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDGVVRALEFLGNKVI 127

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D    E     V
Sbjct: 128 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRTAKEHYDSDEVFAEKARNYV 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWL-------------PIVKDYSVQAMMKIIRDDLKA 251
                G +       +L+N   ++                ++ +     M+  I  DLKA
Sbjct: 188 VKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESLYNPMLPEIVADLKA 247

Query: 252 --LNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             L ++ D  + +  D+F   D  P+  I+      G++Y            +    DR 
Sbjct: 248 QGLAVEDDGALVVFLDEFKNKDGDPMGVIVQK-KDGGFLYTTTDIAAAKYRFETLKADRA 306

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L+F  T     + +  L              Y    +     N   ++G D   +  R 
Sbjct: 307 -LVFSDTRQSQHMQQAWL--------ITRKAGYVPDSFSLEHHNFGMMLGKDGKPFKTRT 357

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--RHVVDEVGSDSVRFM 425
                          V L +L+    +     ++++  D      + VV+ V   +V++ 
Sbjct: 358 GGT------------VKLADLLDEAVERAEKLIAEKNPDLTACEKQAVVEAVAIGAVKYS 405

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +    N++
Sbjct: 406 DLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRVRSIFSRA-----GIDPNSLTANIV 459

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 D  E  L + L ++   +        P+ L  YLY+LA +F   +      P L
Sbjct: 460 L----IDEKERNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFY---EACPIL 512

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++    +   RL+L H  A  +  GL+++G+++  +M
Sbjct: 513 NAEES----IKQSRLKLAHLTAKTLKQGLDLLGIKTVEKM 548


>gi|269103063|ref|ZP_06155760.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162961|gb|EEZ41457.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 576

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 134/608 (22%), Positives = 233/608 (38%), Gaps = 133/608 (21%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + +    + V IAG GFIN++L+  +L    
Sbjct: 37  GDYQANGVMGVAKQLGTNPREFAQKVIDNLDLGEMAEKVEIAGPGFINIFLNKQWL---- 92

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           ++     +   R  + K  +  I  ++ + N    MHVGH R  ++GD +   + F G+ 
Sbjct: 93  AARAEEALNDDRLSVAKEKEQTIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152

Query: 161 VTREYYINDAGAQ-------------------INTLALSVFWRYQQALYNNDSDLPEGYY 201
           V R  ++ D G Q                   +N   L  F+R  + LY+ D +  E   
Sbjct: 153 VIRANHLGDWGTQFGMLIANMVRKEQDGSDVSMNISDLEGFYRESKVLYDEDPEFAETAR 212

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--HDIF 259
             V     G E           +  EKW  +     V+  +K  + +   LN+    +  
Sbjct: 213 NYVVRLQSGDE-----------YCHEKWKQL-----VEITLKQNQRNYDRLNVSLTDENV 256

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRS 313
           + E  ++   P     I+ +L  +G   E        L   K+K                
Sbjct: 257 MGESMYNEMLPG----IVADLKEKGLAVEDDGAVVVFLDEYKNKD--------------- 297

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VK 365
              G+ +   + K DG Y Y   D+A  K +YE+   D ++Y + S    +       V+
Sbjct: 298 ---GEPMGVIIQKRDGGYLYTTTDIACAKYRYEKLHADRVLYFIDSRQHQHLMMAWSIVR 354

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           +   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + +  
Sbjct: 355 KAGYVPESVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAQERANK-- 404

Query: 426 MLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYA 457
           ++  KN EL           +     K  + SK                  N   Y+QYA
Sbjct: 405 LIEEKNPELSAEEKAEIANTVAMAAVKYADLSKHRTTDYIFDWDNMLAFEGNTAPYMQYA 464

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           Y R  SIF++A     DL   +            D  E  L+  L ++   ++       
Sbjct: 465 YTRVASIFKRAGVELADLTHPIIIT---------DEKEQALLSKLLQFEEAVQTVAREGH 515

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ +  YL++LA  F   +      P L        ++   RL+L H  A  I  GL+++
Sbjct: 516 PHVMCNYLFELAGTFSSFYE---ACPILN----AEEEVKQSRLKLAHLTAKTIKQGLDLL 568

Query: 578 GVESPNEM 585
           G+++ + M
Sbjct: 569 GIKTLDRM 576


>gi|327463447|gb|EGF09766.1| arginine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 562

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|291525263|emb|CBK90850.1| arginyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 597

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 133/609 (21%), Positives = 251/609 (41%), Gaps = 103/609 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C       N AM  ++     P  I++ + A ++ D   +SV     GF+N+ +  
Sbjct: 33  RPDLC---EFQCNGAMAAAKEYKCAPFMISDKVAALLESDEMFESVESVKPGFLNIKMDT 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L K ++ +      YG     K   + +++   N   P+HVGH R AV+G+++  +  
Sbjct: 90  AFLAKYMNDMKDDEGRYGLEKAKKPLTIVVDYGGPNVAKPLHVGHLRSAVIGESVKRIAK 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204
           F G+ V  + ++ D G Q+  +   +  R    +Y ++S    G YP            +
Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELRERKPDLVYFDES--YTGEYPKEAPFTISELEDI 207

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258
           Y    GK  +D+   E      ++     + Y   +  +M +   DLK     LN+  ++
Sbjct: 208 YPTASGKSKSDESFKEAALLATKELQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFEL 267

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +  E D     P    ++++ +  +G+ +  EG L         K D D K++       
Sbjct: 268 WKGESDAQPYVP----EMVEMMKEKGFAHMSEGALV-----VDVKEDTDTKEI------- 311

Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                 P   +LKSDG+  Y   DLA    +  E   D +IY+  +  S +  ++   A 
Sbjct: 312 ------PPCIILKSDGASLYSTTDLATLVMRMKENNPDRVIYLADARQSMHFIQVFRCA- 364

Query: 373 AVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
               +K  I     ELV +       +DG P K   R G  + L +++ E+  + +  + 
Sbjct: 365 ----RKTGIVPDTTELVHIGFGTMNGKDGKPFKT--RDGGVMRLEYLLKEIDDEMLNKIK 418

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485
             +K  E L+ D  + ++ +K   +  V+Y     ++    +KD   D+D F  F  N  
Sbjct: 419 ENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLSNQA----SKDYIFDIDRFTSFEGNTG 474

Query: 486 P----------------QESEFDTSELQ-------------LIVHLAEYPRVIENATIAQ 516
           P                +    D S L+             L++ LA++   IE+A    
Sbjct: 475 PYILYTIVRIKSILSKYEAKGGDISALKDAIMPAVNAGQKNLMLSLAKFNATIESAYEES 534

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+K+  Y+Y+LA+ F+G +         + +   N +L    + L+     I+ + +++
Sbjct: 535 APHKICAYIYELANAFNGFYHD------TKILSEENEELKKSYISLLVLTKEILEACIDM 588

Query: 577 IGVESPNEM 585
           +G  +P+ M
Sbjct: 589 LGFSAPDRM 597


>gi|241896416|ref|ZP_04783712.1| arginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870396|gb|EER74147.1| arginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 561

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 263/599 (43%), Gaps = 111/599 (18%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFINL 91
           IE P+D + G  +     +L++   + P  IA  IV+ I  D   +V +V      ++N 
Sbjct: 27  IEVPKDASMGDYAF-PTFLLAKARRMAPQQIATNIVSEIATDGFKEVKAV----GPYVNF 81

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L  +       + V+   +YG N  G+   + I+  S N   PM +GH R  V+G++LA
Sbjct: 82  FLDQAQFGADTLAEVLRQTDYGHNTDGEAGHITIDMSSPNIAKPMSMGHLRSTVIGNSLA 141

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-H 208
            +   +GY+  +  ++ D G Q   L +S +  W  ++ +  +  +    YY   + +  
Sbjct: 142 EIAKANGYQPIKINHLGDWGTQFGKL-MSAYKRWGSEEEVKADPINTLVKYYVRFHKEAE 200

Query: 209 VGKELADK---YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
              EL D+   +  +L +  EE    W    ++ S++  M++  D    L+I  D F  E
Sbjct: 201 TQPELNDEGRAWFKKLEDGDEEAHELW-SWFREESLKEFMELYND----LDIDFDSFNGE 255

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++      +  +ID L  +  + E       S+  Q  D++ + L     M+      
Sbjct: 256 AFYN----DKMDAVIDTLKEKHLLVE-------SQGAQVVDLEDEGL--NVAMIQ----- 297

Query: 323 PLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
              ++DG+  Y   DLA   + K  Y   F   +YV+G +   +  +++AV   +  E  
Sbjct: 298 ---RTDGATLYMTRDLAAAIFRKNNY--NFVKSLYVVGGEQREHFMQMKAVLKKMGYEWS 352

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------------------------ 414
             I  +   ++ +  DG   K+S R+G  I L+ V+                        
Sbjct: 353 DDIEHIPFGMITV--DGK--KLSTRSGRIILLKDVLADSVKLATAQIDEKNPNLANKEVV 408

Query: 415 -DEVGSDSVRFMMLWRKNSELLDFDFCKVKE----QSKENPVFYVQYAYARCRSIFRQAK 469
             EVG+ +V F  L   N  L +FDF K++E    +    P  YVQY  AR +SI R+A 
Sbjct: 409 AHEVGTGAVVFHDL--MNERLGNFDF-KLEEVVRFEGDTGP--YVQYTNARAQSILRKAG 463

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
              P+LD +      I  E  ++T +L     +A +  ++  A   +EP  +A Y  +LA
Sbjct: 464 K--PELDLNNLS---IDDEQVWETEKL-----VASFNDIVRRAWRDREPSVIAKYSLNLA 513

Query: 530 SVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++ +   E+ +L             RL LV AV+ ++   L ++GV++P EM
Sbjct: 514 RAFNKYYANSKILVEDDQLN-----------ARLALVTAVSYVLTESLRLLGVKAPKEM 561


>gi|325686756|gb|EGD28782.1| arginine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 562

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKGQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|329296274|ref|ZP_08253610.1| arginyl-tRNA synthetase [Plautia stali symbiont]
          Length = 576

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 135/588 (22%), Positives = 233/588 (39%), Gaps = 93/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG  P  +AE +V  + +      V IAG GFIN++L   +L +  
Sbjct: 37  GDYQANGIMAVAKKLGQVPRQLAEQVVQHLDLAGIASKVDIAGPGFINIFLDRQWLAQQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +  +      G + +   T V I++ + N    MHVGH R  ++GD +     F G+ V 
Sbjct: 97  AQALQLP-RLGVSEVTPQTIV-IDYSAPNVAKEMHVGHVRSTIIGDAVVRTQEFLGHHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKQQNEHHEDIALADLEAFYREAKRTYDEDEAFAERARGYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G E       +L++    +   +    +V     + R D+   ++ +D+      
Sbjct: 215 VKLQGGDEYCRAMWKKLVDITMSQNQQVYDRLNV----TLTRKDVMGESLYNDML----- 265

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                P  I D+ +         +G+    +  T    D  + +        G+ +   +
Sbjct: 266 -----PGIIADLRE---------KGLAVTSEGATVVFLDEFKNK-------EGEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE    D ++Y + S    +       V++   V  +V  
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYVPESVPL 364

Query: 377 KKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEV 417
           +     ++L +  R +  R G  IK+S       +RA   ++          L+ +V+ V
Sbjct: 365 EHHAFGMMLGKDGRPFKTRSGGTIKLSDLLDEAVERAHALVSEKNPEMSAAELKELVEVV 424

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A      ++ 
Sbjct: 425 GIGAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----GIEA 478

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D    ++I      D  E  L   L ++   I        P+ +  YLYDLA +F G + 
Sbjct: 479 DSLRGDIILT----DEREALLATRLLQFEETITQVARDGTPHVMCAYLYDLAGLFSGFYE 534

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H    P L   + N R     RLQL    A  +  GL+ +G+++   M
Sbjct: 535 H---CPILSAEEENVRN---SRLQLAALTAKTLKQGLDTLGIKTVERM 576


>gi|328675681|gb|AEB28356.1| Arginyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 581

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 149/637 (23%), Positives = 261/637 (40%), Gaps = 120/637 (18%)

Query: 11  LKNYLKEIDCKIKVEKKI-----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++N+L EI  K  V KK+       ++V     D   GH   NAAM L++     P  IA
Sbjct: 3   IENHLSEIFAK--VFKKLGYVESFAKVVTSTREDV--GHFQCNAAMPLAKFAKKPPFVIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I+  I  +     + +A  GFIN+ L+P +L  I +  + S  ++G     +  KV +
Sbjct: 59  EEIIEHIDAEDIFAKLEVAKPGFINITLAPKFLATITNKFLNS-TKFGAQNNSQSRKVVL 117

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F   N   PMHVGH R A++GD L  +  F       + ++ D G Q+  L   +    
Sbjct: 118 DFGGPNVAKPMHVGHIRSALLGDALQRIHRFYNDTAVSDVHLGDWGTQMGMLIEEIKLES 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKY---------------SSELLNFPEEK-- 228
            + +Y +++    G YP      V +ELA+ Y                + L  F  ++  
Sbjct: 178 PELVYFDEN--YTGEYPAESPVTV-QELAEIYPRASKRCKSDIDEMEKARLATFELQQGR 234

Query: 229 ------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                 W   VK  S+ A    ++ D   L++  D+++ E D ++     + ++I     
Sbjct: 235 RGYVALWQHFVK-ISIDA----VKKDFDNLDVHFDLWLGESDANKF----VDEMISYFKA 285

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA- 339
             ++YE                D+   +  +   G     PL  +K DG   Y   DLA 
Sbjct: 286 NNFIYE----------------DQGAWVIDTNKDGIP---PLIVIKKDGGIMYGTTDLAT 326

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY---- 392
            ++   +   D +IYV+    S + K++ +VA     VSEK        C+L  +     
Sbjct: 327 LWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKIVSEK--------CKLKHVAFGTV 378

Query: 393 --RDGMPIKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNS 432
             +DG P K  +           +A ++   R       ++++++   +++F  L    +
Sbjct: 379 NGKDGRPFKTREGGVMHLADLISQAKEYAKKRMPDENDDNIINQIAMATIKFGDLVNNYA 438

Query: 433 ELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRN--VIPQE 488
               FD  K  + + K  P  Y+ Y   R +SI R+   IF  + D     ++  VI   
Sbjct: 439 NDYIFDLEKFAQHEGKTGP--YLLYTAVRAKSILRK---IFGENYDIGSLTKDYKVINAH 493

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +E    E +L + L ++P  I+ A    +P+ +  Y Y LA+ F+  + +          
Sbjct: 494 NE---HEEKLQLQLIQFPIAIQRAYENSQPHHICEYAYSLANNFNKFYVN------CPIT 544

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N+  L   R+ L  A    +    N++G+  P  M
Sbjct: 545 NLNDESLRKARIALCMATVKAMTIATNLLGISIPERM 581


>gi|90411614|ref|ZP_01219624.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327504|gb|EAS43857.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 576

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 134/603 (22%), Positives = 235/603 (38%), Gaps = 123/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL---- 98
           G    N  M +++ LG +P   A+ ++  + +D   + V IAG GFIN++L  S+L    
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVIDVLDLDGIAEKVEIAGPGFINIFLDKSWLAARA 96

Query: 99  -RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +    +    E  +N++       +++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EEALTDDRIGVAAEKQQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDL-- 196
           G+ V R  +I D G Q   L                    L  F+R  + LY+ D +   
Sbjct: 150 GHNVIRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLYDEDEEFAV 209

Query: 197 -PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
              G+        V  +  D+Y + +       W  +V    VQ     I  D   +++ 
Sbjct: 210 RARGFV-------VKLQSGDEYCAGM-------WKKLVDVTMVQNQ---INYDRLNVSLT 252

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--- 312
            D  + E  ++   P    +I+ +L  +G   E                D  Q++F    
Sbjct: 253 RDNVMGESMYNDMLP----NIVADLKEKGLAVES---------------DGAQVVFLDEY 293

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371
               GD +   + K DG + Y   D+A  K ++E+   D ++Y + S    ++ +  ++ 
Sbjct: 294 KNKDGDPMGVIIQKRDGGFLYTTTDIACAKYRFEQLNADRVLYFIDSRQHQHLMQAWSIV 353

Query: 372 AAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
                   ++ +      + L +DG P K   RAG  + L  ++DE  S+     ++  K
Sbjct: 354 RKAGYVPEEVTLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDE--SEVRAAKLIEAK 409

Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462
           N EL           +     K  + SK                  N   Y+QYAY R  
Sbjct: 410 NPELEATEKDKIAKTVAMAAVKYADLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF++A     DL   +            D  E  L+  L ++   + N +   +P+ + 
Sbjct: 470 SIFKRADVNLADLTHPIVIN---------DEKEQALLSTLLQFEEAVLNVSREGQPHLMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +      P L   +A    +   RL+L    A  I  GL+++G+E+ 
Sbjct: 521 TYLFELAGKFSSFYEAC---PILNAEEA----VKQSRLKLALLTAKTIKQGLDLLGIETL 573

Query: 583 NEM 585
             M
Sbjct: 574 ERM 576


>gi|261377586|ref|ZP_05982159.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146334|gb|EEZ72752.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 572

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 127/589 (21%), Positives = 242/589 (41%), Gaps = 86/589 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  IVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHA-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFIGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLEEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378
           + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +   S    + K
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKASYLPEDAK 362

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           A+    +     + +DG P K   R+GD + L  ++ E                      
Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAE 417

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A   
Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++
Sbjct: 475 ----EWDTTVPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           F   +      P L+   A        RLQL       +  GL ++G++
Sbjct: 526 FSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLELLGID 567


>gi|325132648|gb|EGC55334.1| arginyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138564|gb|EGC61127.1| arginyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 572

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 122/586 (20%), Positives = 239/586 (40%), Gaps = 80/586 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKARFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + K  G + Y + DLA  + ++     D ++YV+    + + ++L   +         + 
Sbjct: 303 VQKQGGGFLYASTDLACLRYRFGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYLPENVG 362

Query: 383 VLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
                    + +DG P K   R+GD + L  ++ E                         
Sbjct: 363 AAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIG 420

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A      
Sbjct: 421 KTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAS----- 474

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F  
Sbjct: 475 -EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSR 528

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            +      P L+   A+       RLQL       +  GL ++G++
Sbjct: 529 FY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLELLGID 567


>gi|329119396|ref|ZP_08248082.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464541|gb|EGF10840.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 572

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 135/591 (22%), Positives = 248/591 (41%), Gaps = 90/591 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++   G    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPAKNADFGDYQINGVMGAAKQAKQNPRELAQKVADALAGNAVIESAQVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGD 148
            L P +L    +  V + +   R  + K      V I++ S N    MHVGH R +++GD
Sbjct: 85  RLRPDFL----AEHVQTALNDPRCGVAKKDTPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +++ ++ F+G  V R+ ++ D G Q   L   +  + +       SDL + Y        
Sbjct: 141 SISRVLEFAGDTVIRQNHVGDWGTQFGMLVAYMVEQQKDNAAFELSDLEQFYRAAKVRFD 200

Query: 209 VGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDD 264
                AD     +  L   +E  L + + +   ++   + + D L  L +       E  
Sbjct: 201 EDAAFADTAREYVVKLQGGDENVLKLWQQFVEISLGHAQAVYDTL-GLKLTPADVAGESK 259

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +++ +D+L RQG   E       +K     +   K+        G+     +
Sbjct: 260 YN----PELQNTVDDLVRQGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIV 303

Query: 325 LKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            K  G + Y + DLA    +Y  G    D ++YV+    + + ++L     A S K   +
Sbjct: 304 QKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQL----FATSRKAGYL 357

Query: 382 -NVLLCELV----RLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
            + +  E V     + +DG P K   R+GD + L  ++DE                    
Sbjct: 358 PDSVKAEFVGFGTMMGKDGRPFKT--RSGDTVKLVDLLDEAVERAAALVKEKNPDLGADD 415

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A+
Sbjct: 416 AAKIAQTVGIGAVKYADLSKNRTSDYIFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAE 474

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +     D  L            + +E QL + L ++  V+++A     P+ LA YLY LA
Sbjct: 475 EWDAAADLVL-----------TEPAEKQLALELLKFEDVLQSAADTGYPHYLAAYLYQLA 523

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           ++F   +      P L+  +   R     RLQL     +I+  GL ++G+E
Sbjct: 524 TLFSRFY---EACPILK-AEGTARN---SRLQLARLTGNILKQGLELLGIE 567


>gi|227485245|ref|ZP_03915561.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236705|gb|EEI86720.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 565

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 135/575 (23%), Positives = 232/575 (40%), Gaps = 97/575 (16%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIE 111
           L++ L  +P  IA  + + + ID D   +   G  +IN +L    +   ++++I+     
Sbjct: 46  LAKTLRKNPAQIAAELASTLVID-DFSEIKNVGP-YINFFLDRKKFENDVINAIIDKKEN 103

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG++ +GKG    +EF S N   P H+GH R  V+GD L ++  F GY      YI D G
Sbjct: 104 YGKSDMGKGKTAIVEFSSVNIAKPFHIGHIRSTVIGDALRNIHEFLGYNTIATNYIGDYG 163

Query: 172 AQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
            Q  T+ A    W   + L  N    P      +Y+         +Y++E     E    
Sbjct: 164 TQFGTMIAAYKLWGDDEKLNAN----PIKELLNLYV---------RYNTEASENEE---- 206

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHD------IFISEDDFHRGDPS-PIRDI-IDNLAR 282
                     MM++ R + K L    +       +  E  F+  D    + DI  DN   
Sbjct: 207 ----------MMEVARKEFKNLEEGEEEATRLWSWFKEISFNEFDRVYKLLDIEFDNYKG 256

Query: 283 QGYVYEGILPP---PKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336
           + Y Y   +P       +     + D  Q++  +       D P   ++KS+GS  Y   
Sbjct: 257 EAY-YSKYMPEILEELKEKKLLVESDGAQIIDLAQF-----DLPPSIIIKSNGSSAYITR 310

Query: 337 DLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA-----------------------A 372
           D+A     K E  FD  +YV+ +  + + ++L  +                         
Sbjct: 311 DIATAINRKKEYNFDENLYVVATQQNLHFQQLWRILELMGYDLYKGCKHISFGMVSLKDQ 370

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +S +K Q+ V L +++    +     M  R      +  V   VG  +V+F  L+    
Sbjct: 371 TLSTRKGQV-VFLEDVLNKAIEKTREIMENREDTVDDIGEVSRIVGIGAVKFQELYNNRI 429

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESE 490
           +   FD+ +V     E    YVQY YAR +S+ R+A   +I P           +  E  
Sbjct: 430 KDYVFDWDEVLNFDGETGP-YVQYTYARAKSVLRKAGLGEIKP-----------LAIEKI 477

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E  L+  LA +  V+  A    EP  +  +L D+A  F+  ++  +       +  
Sbjct: 478 TSDEEFSLVKKLAGFEDVVVKAKEKYEPSLVTRHLTDIAKSFNKFYNSSK-------IMV 530

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + KL   RL L +A + +I +GL ++G+++  +M
Sbjct: 531 EDEKLKEERLALAYATSVVIKTGLGLLGIKTVEKM 565


>gi|148240672|ref|YP_001226059.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166232850|sp|A5GP97|SYR_SYNPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147849211|emb|CAK24762.1| Arginyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 597

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 237/596 (39%), Gaps = 98/596 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IVA+++ DP    +     IAG GFINL + P  L
Sbjct: 47  GDFQANGALALAKPLKQAPRQIATAIVAQLQADPAFTDLCLEPQIAGPGFINLTVRPERL 106

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +S+  +     G   + +   V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 107 AAEVSA-RLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 165

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217
           + V R  ++ D G Q   L   +      AL   D+ DL               +L   Y
Sbjct: 166 HPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDL--------------GDLVAFY 211

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F +++         V  +       LKA  +  D   S  +F +     I D +
Sbjct: 212 REAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 264

Query: 278 D-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL----LKSD 328
           D  L  +G  +     P      +  ++    D  Q +F   + G D  +PL     KSD
Sbjct: 265 DIRLNERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKD-GKPLPVIVQKSD 323

Query: 329 GSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQI 381
           G + Y   DLA  + ++    D      +IYV  +  + +   +  VA  A    + A++
Sbjct: 324 GGFNYATTDLAAIRYRFGAAPDGDDARRVIYVTDAGQANHFAGVFQVAQRAGWIPEGARL 383

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
             +   LV+   DG   K+  RAGD + LR ++DE                         
Sbjct: 384 EHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLNEEERSESEEFI 440

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+  D
Sbjct: 441 QHVAGTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGIARKGGD 499

Query: 471 IFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +            V+  + +F +  E  L+  L ++  VI        P +L  YL++L+
Sbjct: 500 L-----------EVLTGQLQFSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFELS 548

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            VF+  +        +  ++A+   L   RL L    A  + SGL ++G+ + + M
Sbjct: 549 QVFNRFYDQ------VPVLKADAEALP-SRLALCRLTADTLKSGLGLLGIPTLDRM 597


>gi|328944750|gb|EGG38911.1| arginine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 562

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIATDIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARVQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|319637713|ref|ZP_07992479.1| arginyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400868|gb|EFV81523.1| arginyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 572

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 126/587 (21%), Positives = 243/587 (41%), Gaps = 82/587 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LSP +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLSPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNNVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAIED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380
           + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +  A    + A+
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEHAK 362

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
              +    + + +DG P K   R+GD + L  ++ E                        
Sbjct: 363 AEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAGKI 419

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A     
Sbjct: 420 GKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG---- 474

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F 
Sbjct: 475 --EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTVYPHYLAAYLYQIATLFS 527

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
             +      P L+   A        RLQL       +  GL ++G++
Sbjct: 528 RFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLELLGID 567


>gi|156383395|ref|XP_001632819.1| predicted protein [Nematostella vectensis]
 gi|156219881|gb|EDO40756.1| predicted protein [Nematostella vectensis]
          Length = 588

 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 139/613 (22%), Positives = 251/613 (40%), Gaps = 111/613 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           I+++  ++   G    N+AM LS+ L       +P  IA+ I+A +  +  ++ V IAG 
Sbjct: 28  ILVQSTQNDKFGDYQCNSAMGLSQILKNNGQKANPQAIAKSIIASLPPNDLIEKVDIAGP 87

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN++++  +++ IL  +V +G+      I    +  ++F S N    MHVGH R  ++
Sbjct: 88  GFINVHMNKKFIKDILRDVVANGVH--PPAIRSRQRCIVDFSSPNIAKEMHVGHLRSTII 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187
           G+++  L+ + G++V R  +I D G Q   L                    L  F++  +
Sbjct: 146 GESICRLLEYVGHDVLRLNHIGDWGTQFGMLIAHLQDEFPDYLEKSPPIEDLQAFYKESK 205

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L+++D    +  Y  V     G+    K            W         + +  + R 
Sbjct: 206 TLFDSDEQFKKRAYERVVQLQQGEPNVRK-----------AW---------EMICDVSRK 245

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM--- 304
           + + L  +  + I E    RG+                 Y+ ++P        K  +   
Sbjct: 246 EFEKLYERLGVTIIE----RGES---------------FYQPMMPQLVELLESKGKVLVE 286

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHSG 362
           D ++++F   + G  V   ++KSDG YTY  +DLA  + +   ERG D +IYV  +  SG
Sbjct: 287 DGRKVVF---VEGYKVPLTVVKSDGGYTYDTSDLAALRQRVEDERG-DWIIYVTDAGQSG 342

Query: 363 YV-----------------KRLEAVAAAV------------SEKKAQINVLLCELVRLYR 393
           +                   R++ V   V            S +  ++  L+ E +R   
Sbjct: 343 HFDLVFGAAREAGIYDPKRTRVDHVGFGVVLGEDRKKFKTRSGETVRLVDLMDEGIRRSV 402

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D +  K   +A     LR   + V    +++  L         F F K+ +  K N   Y
Sbjct: 403 DKLKEKGRDQALSEDELRAASEAVAYGCIKYADLSHNRVGDYVFSFDKMLD-DKGNTAVY 461

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENA 512
           + YAY R RSI R A      +D     + +   E   +   E +L   +  +P+V+   
Sbjct: 462 LLYAYTRIRSIMRTA-----GMDRASLEQAIHNTEISLEHPKEWKLGKCITRFPQVLSRI 516

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                 + L  +LY+LA+     +       + R    +  K+ + RL L+ A A I+ +
Sbjct: 517 LEDLLMHPLCEFLYELATTTTEFYDSCYCVEKDRQT-GDIVKVNVDRLLLLEATARIMET 575

Query: 573 GLNIIGVESPNEM 585
           G +I+G+ + N+M
Sbjct: 576 GFHILGINTVNKM 588


>gi|254446754|ref|ZP_05060229.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198256179|gb|EDY80488.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 584

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 140/605 (23%), Positives = 251/605 (41%), Gaps = 108/605 (17%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS---VFIAGKGFINLY 92
           RP D   G L  N A+  ++    +P  IA+ +V +++ +P++     + IAG GFIN  
Sbjct: 33  RPADPRFGDLQANGALPYAKRNKNNPRQIAQSLVEKLEANPNLTEHADISIAGPGFINFK 92

Query: 93  LSPSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             PS+    LS+       +     +  G KV +++ S N    MHVGH R  V+G+ + 
Sbjct: 93  FKPSFQLAWLSAFRDRESFKSAAKALHAGEKVVVDYGSPNTAKQMHVGHIRSIVIGEAIC 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLPEGYYPGVYL 206
            L+ F G EV R+ +I D G     L    F+ Y+     +AL  +  +  E  Y     
Sbjct: 153 RLLEFCGAEVVRDNHIGDWGTPYGKL----FYAYKRHLDAKALERDPLEELERLY----- 203

Query: 207 KHVGKELADKYS------SELLNF----PEEKWL-PIVKDYSVQAMMKIIRDDLKALNIQ 255
             +G +LAD  +       EL++     PE   L   V   S+Q +  I ++    L++ 
Sbjct: 204 -KLGSKLADDAAVLEECRQELVDLQAGKPESMALWETVNKLSIQGLETIYKE----LDVH 258

Query: 256 HDIFISEDDFHRGDPSPI-RDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +D ++ E  F+R     + +++ DN L+ +      +  P   +  ++  + R       
Sbjct: 259 YDCYLGE-SFYRDKVEQVYQELKDNGLSEESKGAVVVFHPEHPRFKEQPFIIR------- 310

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAA 372
                       KSDG+  Y   DLA    + E      I ++  D    + ++L+    
Sbjct: 311 ------------KSDGASNYATTDLATMLYRNEHFKATSIVIVTDDRQKDHFEQLDLTTK 358

Query: 373 AVSEKK------------AQINVLLCELVRLYRDGMPIKMSK-------RAGDFI----- 408
              EK              +IN    ++++  R G PI++ +       RA   +     
Sbjct: 359 KWFEKTRRQMPKFSHVMFGKINGEDGKVIK-SRSGDPIRLRQLIDEAVERAAKIVREKNA 417

Query: 409 -----TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCR 462
                 ++H+ + +G +++++  L +  +   D+ F   K  S E N   Y+ YA AR +
Sbjct: 418 TLPEDEIKHIAEVIGVNAIKYADLSQNRTS--DYIFTWEKLLSFEGNTAPYLLYAAARIQ 475

Query: 463 SIFRQA-KDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYK 520
           SIFR+   D   DL+    P         F+T  E+ L   +  +  V+++      P+ 
Sbjct: 476 SIFRKLDTDQLADLESKATP---------FETPEEIALANKIIAFVGVLQSTIEQLRPHL 526

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YL++LA  +   +S  +       V  +   +   RL L       + SGL ++G+ 
Sbjct: 527 LCTYLFELAGAYSSFYSANK-------VIVSESDVQARRLLLCQRTLVALQSGLGLLGIP 579

Query: 581 SPNEM 585
           +   M
Sbjct: 580 TLQRM 584


>gi|86742408|ref|YP_482808.1| arginine--tRNA ligase [Frankia sp. CcI3]
 gi|86569270|gb|ABD13079.1| Arginine--tRNA ligase [Frankia sp. CcI3]
          Length = 348

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 84/137 (61%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERP+   HG  ++  A+ L+R     P  +AE +  R+  D ++ +V +AG GF+N 
Sbjct: 31  VTVERPKTPEHGDYASPVALQLARAARRPPRAVAETLARRLATDSELAAVDVAGPGFLNF 90

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+ + L +I  ++V +G  YGR +  +G +VN+EFVSANPTGP+ +   R A VGD L 
Sbjct: 91  RLADAALGEIARTVVSAGDRYGRAVRPRGVRVNLEFVSANPTGPVTLASARRAAVGDALG 150

Query: 152 SLMAFSGYEVTREYYIN 168
            ++  +G+EV  EY++ 
Sbjct: 151 RILPAAGFEVGTEYHVG 167



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 16/181 (8%)

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L  +VD VG+D+ R+ ++       LD D   +  Q+ +NPVFYVQYA+AR  S+ R A
Sbjct: 180 ALDDLVDAVGADAARYWLVRSSPDSALDLDLDLMARQTSDNPVFYVQYAHARISSLLRDA 239

Query: 469 KDIFPDLDFDLFPRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             +   L     P +V     P+E E       L+  L E+PRVIE+A   + P++LA Y
Sbjct: 240 GSL--GLTAATEPVDVALLTQPREGE-------LLRALGEFPRVIESAARLRGPHRLARY 290

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L +LA V++  +   R  P+     A     T  RL LV A   +  +GL ++GV +P  
Sbjct: 291 LEELAGVYYRFYDSCRVLPQ---GDAEPGPATGARLLLVAATRVVFANGLGLLGVSAPER 347

Query: 585 M 585
           M
Sbjct: 348 M 348


>gi|332523559|ref|ZP_08399811.1| arginine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314823|gb|EGJ27808.1| arginine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 562

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 247/588 (42%), Gaps = 86/588 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++      L++ L   P  IA  +    KID       +A   +IN +
Sbjct: 26  LLETPKNSDMGDIAF-PTFSLAKVLRKAPQMIAAELAE--KIDSSQFEKVMAVGPYINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + + K +L +++    +YG+  IG G  + ++  S N   P  VGH R  V+ D + 
Sbjct: 83  LDKTTISKNVLHAVIEEKSDYGQQHIGDGQNITLDMSSPNIAKPFSVGHLRSTVIADAIG 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + +  GY   R  ++ D G Q   L ++   W  Q A+  N  D          LK   
Sbjct: 143 HIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLWGDQAAIEANPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+   +  L+    +W   ++D   +A  + +  RD+ L   N  +D      D+  
Sbjct: 195 RINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYDKLDVTFDYFH 254

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-- 325
           G+ +   D +D   +   + E      +SK  Q  D+++  L             P L  
Sbjct: 255 GE-AFYNDKMDEGIQ---ILEDKHLLKESKGAQIVDLEKYDL------------PPALIK 298

Query: 326 KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           KSDG+  Y   D+A    + +R F+    IYV+G + S + K+L+AV   +    A  N+
Sbjct: 299 KSDGATLYITRDMATAMYR-QRTFNFVKNIYVVGQEQSHHFKQLKAVLKEMGFDWAD-NM 356

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
           +      + ++    K+S R G+ I L   +DE                         VG
Sbjct: 357 IHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAVARALTQIESKNPDLENKEAVAHAVG 414

Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +V+F  L        DFD    V  + +  P  YVQY YAR +SI R+A +  P+++ 
Sbjct: 415 VGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYTYARIQSILRKA-NFTPEINK 471

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D          S  D    ++I  L  +   I+ A    +P  +A +   LA  F+ +++
Sbjct: 472 DY---------SLNDDESWEIIKLLQSFATNIQRAADKYDPSIIAKFAIQLAQAFNKYYA 522

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R        +++ R     RL L ++ A ++   L ++GV++P +M
Sbjct: 523 HTR-----ILDESDERD---SRLALCYSTAVVLKESLRLLGVQAPEKM 562


>gi|256787088|ref|ZP_05525519.1| arginyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770986|ref|ZP_06530364.1| arginyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289701185|gb|EFD68614.1| arginyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 586

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 132/596 (22%), Positives = 233/596 (39%), Gaps = 111/596 (18%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           N  + L++    +P  +A  +VARI   D  ++ V ++G GF+N+ ++   +   L++ +
Sbjct: 44  NGILALAKKTKANPRELAAEVVARITTGDELIEDVEVSGPGFLNITVADRAITANLAARL 103

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
             G   G  L        +++   N    MHVGH R AV+GD L S++ F+G +    ++
Sbjct: 104 ADGERLGVPLKQDAGTTVVDYAQPNVAKEMHVGHLRSAVIGDALRSMLDFTGEKTIGRHH 163

Query: 167 INDAGAQINTLALSVF------------------------WRYQQALYNNDSDLPEGYYP 202
           I D G Q   L   +F                        ++  +A+++ D +  E    
Sbjct: 164 IGDWGTQFGMLIQYLFEHPGELAPAGDVDGEQAMSNLNRVYKASRAVFDTDEEFKERARR 223

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            V    V  +  DK + +L       W   V +  V       + D++   I+ D  + E
Sbjct: 224 RV----VALQSGDKETLDL-------WQQFVDESKVYFYSVFEKLDME---IRDDEIVGE 269

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
             ++ G P   R     L   G     EG L                 + F      DD 
Sbjct: 270 SAYNDGMPETAR----LLEETGVAVRSEGALV----------------VFFDEIRGKDDQ 309

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
             PL+  K+DG + Y A+DL   + + +      ++YV+    S + + +   A      
Sbjct: 310 PVPLIVQKADGGFGYAASDLTAIRNRVQDLHATTLLYVVDVRQSLHFRMVFETARRAGWL 369

Query: 378 KAQINVL-LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
             ++    +     L  DG P K   RAG+ + L  ++DE                    
Sbjct: 370 GDEVTAHNMGYGTVLGADGKPFKT--RAGETVRLEDLLDEAVQRAAEVVREKARDLTEDE 427

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A 
Sbjct: 428 IQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAG 486

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           ++ P              E     +E  L +HL  +   +  A     P+KLA YLY LA
Sbjct: 487 EVRP----------AAHPELALHEAERALGLHLDAFGTTVFEAAAEYAPHKLAAYLYQLA 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S++   +       +   ++A   +    RL L    A  ++ G+ ++G+ +P  +
Sbjct: 537 SLYTTFYD------KCPVLKAETPEQVENRLFLCDLTARTLHRGMALLGIRTPERL 586


>gi|221091655|ref|XP_002169247.1| PREDICTED: similar to arginyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 762

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 143/608 (23%), Positives = 247/608 (40%), Gaps = 117/608 (19%)

Query: 43  GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM +++         L P+ IAE I+  +  +P V  V IAG GFIN+ L   
Sbjct: 207 GDYQCNSAMAIAKLAEKKHGKKLSPVVIAEKILENLPSNPVVKEVSIAGPGFINITLEKR 266

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           ++  IL+ ++   +      +GK  KV I+F S N    MHVGH R +++G++LA L+ F
Sbjct: 267 FVCDILNKVLHEKVHPPG--VGKKKKVIIDFSSPNIAKEMHVGHLRSSIIGESLARLLEF 324

Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLP 197
             ++V R  ++ D G Q   L                    L  F++  +  ++ D +  
Sbjct: 325 LNHDVLRLNHVGDWGTQFGMLIAHLEDKFPNFKEVSPPIEDLQSFYKASKKRFDEDGEFK 384

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           +  Y  V     G                    P VK+ + + +  + R + + +  + D
Sbjct: 385 KRAYQRVVDLQGGN-------------------PDVKN-AWKLICDVSRKEFQRIYDRLD 424

Query: 258 I-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           I  I   + +  D  P   I+++L +  ++ +           +K D D + + +   M 
Sbjct: 425 ITLIERGESYYNDLMP--KIVEDLKKGSFLLD---------ICEKAD-DGRWIAWAPNM- 471

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              +   L+KSDG +TY  +DLA    + K E G + +IYV+ +    + K++  +A   
Sbjct: 472 --KIPLILVKSDGGFTYDTSDLAALHQRLKDEHG-EWVIYVVDAGQGDHFKQVFGLAQKA 528

Query: 375 SEKKAQINVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                 I  +  +   V L  D    K   R+GD + L  ++DE    S+  ++   ++ 
Sbjct: 529 GWYNPSITRVDHVAFGVVLGEDKK--KFKTRSGDTVRLSELLDEGLKRSMDKLLEKERDK 586

Query: 433 E---------------------------LLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
           E                           L+D+ F   K    K N   Y+ YAY R RSI
Sbjct: 587 ELSPDELKAAQSSTAYGCIKYADLCHNRLMDYVFSFDKMLDDKGNTAVYLLYAYTRIRSI 646

Query: 465 FRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R+AK     L+  +   ++ +  E E+   +L     L  +P VI         + L  
Sbjct: 647 QRKAKVDEQVLNLYISQNSINLSHEKEWKLGKL-----LCRFPEVITRCANDLMLHPLCE 701

Query: 524 YLYDLASVFHGHWSH------GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           YLY+LAS     +         RE   +  V  N       R+ ++  VA    +G  I+
Sbjct: 702 YLYELASTLTEFYDACYCIEINRETGEILSVDLN-------RIAILETVAKFFETGFYIL 754

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 755 GLKPVTKM 762


>gi|89073534|ref|ZP_01160057.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050798|gb|EAR56279.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 576

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 133/590 (22%), Positives = 246/590 (41%), Gaps = 97/590 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100
           G    N  M +++ LG +P   A+ ++  +++D   + V IAG GFIN++L+ ++L +  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVIDCLELDGIAEKVEIAGPGFINIFLNKAWLAERG 96

Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +    +    E  +N++       +++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EEALKDERLAVNTETAQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELAD 215
           G+ V R  ++ D G Q   L  ++  + Q+   +  N SDL EG+Y    + +   E   
Sbjct: 150 GHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMNISDL-EGFYRESKVLYDEDE--- 205

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIR 274
           ++     NF     L    +Y ++   +++   LK     +D + +S  D +    S   
Sbjct: 206 EFGKTARNFVVR--LQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESMYN 263

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSY 331
           D++           G++   K K     + D   +++        G+ +   + K DG Y
Sbjct: 264 DMLS----------GVVADLKEKGL-AVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGY 312

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383
            Y   D+A  K +YE+   D ++Y + S    +       V++   V  +VS +     +
Sbjct: 313 LYTTTDIACAKYRYEQLHADRVLYFIDSRQHQHLMMAWAIVRKAGYVPESVSLEHHAFGM 372

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL--------- 434
           +L       +DG P K   RAG  + L  ++DE    + +  ++  KN EL         
Sbjct: 373 MLG------KDGRPFKT--RAGGTVRLADLLDEAVERANK--LIEEKNPELSAEEKANIA 422

Query: 435 --LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIFPDL 475
             +     K  + SK                  N   Y+QYAY R  SIF++A     DL
Sbjct: 423 QTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRANVELSDL 482

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              +    VI      D  E  L+  L ++   +++     +P+ +  YL++LA +F   
Sbjct: 483 THPI----VIT-----DEKEQALLSKLLQFEEAVQSVAREGQPHLMCTYLFELAGMFSSF 533

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      P L   +     +   RL+L    +  I  GL+++G+E+   M
Sbjct: 534 Y---EACPILNAEEG----VKQSRLKLALLTSKTIKQGLDLLGIETLERM 576


>gi|324992656|gb|EGC24577.1| arginine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995815|gb|EGC27726.1| arginine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|325697259|gb|EGD39145.1| arginine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327460059|gb|EGF06398.1| arginine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327472205|gb|EGF17642.1| arginine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327488649|gb|EGF20449.1| arginine--tRNA ligase [Streptococcus sanguinis SK1058]
 gi|332360168|gb|EGJ37982.1| arginine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 562

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPELEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|238924596|ref|YP_002938112.1| arginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511645|sp|C4ZD15|SYR_EUBR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238876271|gb|ACR75978.1| arginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 597

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 133/609 (21%), Positives = 250/609 (41%), Gaps = 103/609 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C       N AM  ++     P  I++ + A ++ D   +SV     GF+N+ +  
Sbjct: 33  RPDLC---EFQCNGAMAAAKEYKCAPFMISDKVAALLESDEMFESVESVKPGFLNIKMDT 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L K ++ +      YG     K   + +++   N   P+HVGH R AV+G+++  +  
Sbjct: 90  AFLAKYMNDMKDDEGRYGLEKAKKPLTIVVDYGGPNVAKPLHVGHLRSAVIGESVKRIAK 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204
           F G+ V  + ++ D G Q+  +   +  R    +Y ++S    G YP            +
Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELRERKPDLVYFDES--YTGEYPKEAPFTISELEDI 207

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258
           Y    GK  +D+   E      ++     + Y   +  +M +   DLK     LN+  ++
Sbjct: 208 YPTASGKSKSDESFKEAALLATKELQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFEL 267

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +  E D     P     +++ +  +G+ +  EG L         K D D K++       
Sbjct: 268 WKGESDAQPYVPG----MVEMMKEKGFAHMSEGALV-----VDVKEDTDTKEI------- 311

Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                 P   +LKSDG+  Y   DLA    +  E   D +IY+  +  S +  ++   A 
Sbjct: 312 ------PPCIILKSDGASLYSTTDLATLVMRMKENNPDRVIYLADARQSMHFIQVFRCA- 364

Query: 373 AVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
               +K  I     ELV +       +DG P K   R G  + L +++ E+  + +  + 
Sbjct: 365 ----RKTGIVPDTTELVHIGFGTMNGKDGKPFKT--RDGGVMRLEYLLKEIDDEMLNKIK 418

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485
             +K  E L+ D  + ++ +K   +  V+Y     ++    +KD   D+D F  F  N  
Sbjct: 419 ENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLSNQA----SKDYIFDIDRFTSFEGNTG 474

Query: 486 P----------------QESEFDTSELQ-------------LIVHLAEYPRVIENATIAQ 516
           P                +    D S L+             L++ LA++   IE+A    
Sbjct: 475 PYILYTIVRIKSILSKYEAKGGDISALKDAIMPAVNAGQKNLMLSLAKFNATIESAYEES 534

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+K+  Y+Y+LA+ F+G +         + +   N +L    + L+     I+ + +++
Sbjct: 535 APHKICAYIYELANAFNGFYHD------TKILSEENEELKKSYISLLVLTKEILEACIDM 588

Query: 577 IGVESPNEM 585
           +G  +P+ M
Sbjct: 589 LGFSAPDRM 597


>gi|332363700|gb|EGJ41480.1| arginine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 562

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIATDIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEVN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D++             D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDLE-------------DFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPELEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|324989672|gb|EGC21616.1| arginine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 562

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKGQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHMRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|167766874|ref|ZP_02438927.1| hypothetical protein CLOSS21_01391 [Clostridium sp. SS2/1]
 gi|317499285|ref|ZP_07957558.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711422|gb|EDS22001.1| hypothetical protein CLOSS21_01391 [Clostridium sp. SS2/1]
 gi|291558413|emb|CBL37213.1| arginyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316893454|gb|EFV15663.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 561

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 134/564 (23%), Positives = 241/564 (42%), Gaps = 92/564 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I    DV  V   G  ++N +L+  +Y++++L+   V+G  YG   IGK
Sbjct: 51  PNMIATEIAEKIPASEDVSKVEAMGP-YVNFFLNKENYVKEVLAK--VNGT-YGAQEIGK 106

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V I++ S N     HVGH R  ++G++L  +    GY+V R  ++ D G Q   L +
Sbjct: 107 GKTVCIDYSSPNIAKNFHVGHLRTTIIGNSLYHIFDKLGYKVERINHLGDWGTQFGKLIV 166

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +   W  ++A+   +  +PE     +Y+K    E A+K   + LN    +W   ++    
Sbjct: 167 AYKKWGSKEAV--EEKGIPE--LLRIYVKF--HEEAEK--DDTLNDQAREWFAKMEQGDE 218

Query: 239 QAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +A+          M   +   K LN+  D +  E  F+R   +    +++ L  +  + E
Sbjct: 219 EALSIWEWFKDISMVEYKRIYKMLNMDFDHYTGE-SFYRDKTAA---VVEELKEKNLLKE 274

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYER 347
                  S+     D+D            D     ++K DGS  Y   DL A F  K E 
Sbjct: 275 -------SEGAMIVDLDEY----------DMAPCLVMKKDGSSIYATRDLAAIFYRKKEY 317

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            FD  IYV G +   +  ++  V   +  + A+ N++      +  +G   K+S R+G+ 
Sbjct: 318 NFDKCIYVTGLEQKLHFAQVFKVVELMGYEWAKENLIHVPYGLVSLEGG--KLSTRSGNI 375

Query: 408 I-----------TLRHVVDE--------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           +            +R ++ E              VG  ++ F  L+ +  + + F + K+
Sbjct: 376 VYAEDILKESVSKIREIIAEKNPDLKDKEDVAQKVGIGAIIFNDLYNQRIKDVTFTWEKI 435

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                E    YVQY YAR  S+ R+       ++D  L            D + + L+  
Sbjct: 436 HSFDGETGP-YVQYTYARAASVLRKTGITEVGEIDPSLVT----------DETSVALLKE 484

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P VI+ A    EP  ++ Y+  +A  F+  +   + N         ++KL   R++
Sbjct: 485 IERFPEVIKVAADRLEPSVISRYVMGVAQSFNRFYHENQCN-------VEDQKLKEARVK 537

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           +V     +I  GL+++G++ P +M
Sbjct: 538 IVILAKQVIKDGLDLLGIQCPEQM 561


>gi|66501636|ref|XP_623301.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Apis mellifera]
          Length = 674

 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 144/612 (23%), Positives = 260/612 (42%), Gaps = 120/612 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGK 86
           ++I    +   G    N+AM L + L  D     P  +A  I+++I+    V  + +AG 
Sbjct: 115 VIISISTNPKFGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIMSKIEESSLVSKLEVAGA 174

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+YL   +++ ILS++V +G  +      K  +V ++F S N    MHVGH R  ++
Sbjct: 175 GFINIYLKKEFIQIILSTLVKNGKVFPP--YTKKQRVIVDFSSPNIAKEMHVGHLRSTII 232

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187
           GD++A L+ F G++V R  ++ D G Q   L                    L  F++  +
Sbjct: 233 GDSIARLLEFLGHDVLRINHVGDWGTQFGMLIAHLQNRFPDYLTISPPIIDLQSFYKESK 292

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           A ++ D +  +  Y  V               +L  F  E    I K +  Q +  + R 
Sbjct: 293 ARFDKDEEFKKHAYNCVV--------------KLQTFDPE----ITKAW--QLICDVSRK 332

Query: 248 DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           + + + ++ DI + E    RG+      +  I+ +L  +G + +              D 
Sbjct: 333 EFEKIYVRLDINLIE----RGESFYQKHMEVIVKDLETKGLLED--------------DE 374

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGY 363
            RK +  +     +++   ++KSDG +TY  +D+A  K + E    D +IYV  +  + +
Sbjct: 375 GRKIMWGKR---NNEIPLTIVKSDGGFTYDTSDMAALKQRIEEERADWIIYVTDAGQAKH 431

Query: 364 VKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + L++ A  A + +   +I+ +   +V L +D    K   R+GD + L  ++DE     
Sbjct: 432 FQILKSCAERAGIIKSYHRIDHVGFGVV-LGKDKKKFKT--RSGDTVKLSDLLDEGLKRA 488

Query: 417 -------------------VGSDSVRFMML------WRKNSELLDFDFCKVKEQSKENPV 451
                              +  +S+ +  +        +N E + F F K+ E  K N  
Sbjct: 489 LDKLKEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYV-FSFDKMLE-DKGNTA 546

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YA  R RSI R A +I  +   +L   N I  E E    E +L   L ++  V+  
Sbjct: 547 VYLLYALTRIRSIARAA-NITQNKLQELAQSNQISLEHE---KEWKLAKVLIKFADVLIK 602

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            T     ++L  Y Y+++  F   + +     +N     V  N     + R+ L  A A 
Sbjct: 603 ITKDLYLHQLCEYCYEISCTFSEFYDNCYCVEKNELGEIVNIN-----IGRMLLTEATAI 657

Query: 569 IINSGLNIIGVE 580
           I+    +I+G++
Sbjct: 658 IMEKCFSILGLK 669


>gi|15674020|ref|NP_268195.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492641|ref|YP_003354621.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|23822205|sp|Q9CE12|SYR_LACLA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|12725087|gb|AAK06136.1|AE006433_6 arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281376305|gb|ADA65796.1| Arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 564

 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+    G L+   A  L++ L   P  IA  I    KID       IA   ++N +
Sbjct: 27  IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   +   +++  ++  G  YG   IG+G  V I+  + N   P  +GH R  V+GD++A
Sbjct: 84  LDKNATASEVIREVLTEGEHYGDANIGQGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209
            +    GY+  +  ++ D G Q   L ++ + +Y  +  +  N  D     Y  +  +  
Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202

Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                D+   +    +   +E+ L I K +S  ++++  R   K L +  D F+ E  + 
Sbjct: 203 EDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNRIYGK-LGVSFDHFMGESFY- 260

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 +  I+++L  +  ++E       SK     D+++  L             P L 
Sbjct: 261 ---SDKMDAIVEDLESKNLLHE-------SKGALIVDLEKYNL------------NPALI 298

Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379
            K+DG+  Y   DL   AY K  +   F   +YV+G + + + K+L+AV   A       
Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
            ++V    + +  +     K S R G  + L   +DE                       
Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +V+F  L    +   DFD  + V  + +  P  YVQYA+AR +SI R+A     
Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +D +     V       D    +++  L E+P V++ A    EP  +A Y   LA  F+
Sbjct: 467 KVDINNISLAV------SDAEAWEIVKALKEFPNVVKRAADNYEPSVIAKYAISLAQAFN 520

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R       +  ++ +L   RL L+ A + ++   L ++GV +P  M
Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564


>gi|224068192|ref|XP_002189938.1| PREDICTED: arginyl-tRNA synthetase [Taeniopygia guttata]
          Length = 625

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 232/533 (43%), Gaps = 77/533 (14%)

Query: 43  GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM +S+ L       + P  IAE IV  I  +  ++ V IAG GFIN++L   
Sbjct: 107 GDYQCNSAMGISQVLLKTREQKVSPREIAEKIVKSIPANECIEKVEIAGPGFINVHLRKD 166

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           ++ K LSS++++G++     IGK  KV ++F S N    MHVGH R  ++G+++  L  F
Sbjct: 167 FVSKQLSSLLINGVQ--PPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEF 224

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELA 214
            GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E  
Sbjct: 225 VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLSVSPPIGDL-QAFYKESKQRFDTEEEF 283

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            K + + +   + K    +K +++  +  + R + + +    DI + E    RG+     
Sbjct: 284 KKRAYQCVVLLQSKNPDFIKAWNL--ICDVSRREFQKIYNCLDITLIE----RGESFYHE 337

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++DI+     +G+V              + D  RK +     + G  V   ++KSDG +
Sbjct: 338 MMKDIVKEFEDKGFV--------------QVDDGRKVVF----VPGFPVPLTIMKSDGGF 379

Query: 332 TYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQI 381
           TY  +DLA  K +   E+G D +IYV+ S  S +++ + A    +            A  
Sbjct: 380 TYDTSDLAALKHRLCEEKG-DILIYVVDSGQSVHLQTVFAAGQMIGWYDPKVTRVAHAAF 438

Query: 382 NVLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSD 420
            V+L E              L+ L  +G+   M K   +  D +     L+     V   
Sbjct: 439 GVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKLKDKERDKVLTPEELKAAQTSVAFG 498

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +++  L         F F K+ +  + N   Y+ YA+ R R+I R A     ++D  + 
Sbjct: 499 CIKYADLSHNRLNDYVFSFDKMLD-DRGNTAAYLLYAFTRIRAIARLA-----NIDEQML 552

Query: 481 PRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            +    +    D   E +L   +  +P +++        + L  YLY+LA+ F
Sbjct: 553 QKAAREEVLVLDHEKEWKLGKCILRFPEILQKILEDLLLHTLCDYLYELATTF 605


>gi|282882268|ref|ZP_06290902.1| arginine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297889|gb|EFA90351.1| arginine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 569

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 137/601 (22%), Positives = 252/601 (41%), Gaps = 106/601 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG----KGF 88
           ++E P D   G  +      L++     P  IAE +  +I      +S + A       +
Sbjct: 27  MVEIPPDYKMGDFAF-PVFSLAKIYRKTPAIIAEELAKKI------ESKYFAKIENKNAY 79

Query: 89  INLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N ++    L  ++L   +     +G++ IG+G  V +E+ S N   P H+GH R  V+G
Sbjct: 80  LNFFIDKDILAEEVLKETIDKKENFGKSTIGRGKNVCVEYSSTNIAKPFHIGHIRSTVIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSD-LPEGYYPGVY 205
           D++  +  F GY      ++ D G Q   L  +   W  ++ +  N  D L + Y     
Sbjct: 140 DSIKRIYQFLGYNTIAINHLGDYGTQFGMLIYAYKKWGDKKKIEENPIDELLKLYVKVNT 199

Query: 206 LKHVGKELADK---YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           L    KE+ ++   +  EL N   E     KW    K+ S++   ++     K L+I+ D
Sbjct: 200 LAEEDKEVKEECRYWFKELENQNPEAVEIWKWF---KEVSLKEFNRV----YKMLDIEFD 252

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E  +    P+ I D+     R   + E      +S+  +  ++             
Sbjct: 253 SYNGESFYSDKMPALIEDL-----RNRNILE------ESQGAEVINL------------- 288

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVA- 371
           D+ D P   ++KSDG+  Y   DLA  K ++E  + F + IYV+GS  S + K+L+A   
Sbjct: 289 DEYDLPPAIVVKSDGTTIYLTRDLAAAKYRHENYKPFRS-IYVVGSQQSLHFKQLKATLK 347

Query: 372 ----------------------AAVSEKKAQINVL---LCELVRLYRDGMPIKMSKRAGD 406
                                   +S +K ++  L   L   +   R+ +  +  K +  
Sbjct: 348 KAGFDWYDEIIHVAFGMVSLEDGTLSTRKGKVVYLEDVLNRAIEKVREILDQREEKTSRK 407

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIF 465
                 + + VG  +++F  L+  N  + D+ F   K  S E     YVQY YAR  S+ 
Sbjct: 408 IENKEELAEIVGIGAIKFQELF--NQRIKDYVFNWDKTLSFEGESGPYVQYVYARISSLL 465

Query: 466 RQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            + +  +    DF L               E+ ++ +L  +  V+ +A    EPY +  Y
Sbjct: 466 EKGEFSLDKKFDFSLLQ----------GQEEVDILRNLYNFTDVVIDAHNKFEPYIITRY 515

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + +LA  F+  ++        R +  ++      RL L ++V ++I  GL+++G+++P +
Sbjct: 516 IVELAKNFNKFYTQ-------RPILVDDELTKNTRLLLCYSVKNVIRQGLDLLGIKAPEK 568

Query: 585 M 585
           M
Sbjct: 569 M 569


>gi|255066448|ref|ZP_05318303.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049328|gb|EET44792.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 572

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 124/586 (21%), Positives = 245/586 (41%), Gaps = 80/586 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHA-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     +  L   +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDSL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPL 324
                ++ ++D+L ++G   E                D  +++F        G+     +
Sbjct: 262 ---DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFIV 303

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQI 381
            K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +  A    + A+ 
Sbjct: 304 QKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKA 363

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
             +    + + +DG P K   R+GD + L  ++ E                         
Sbjct: 364 EFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAGEAAKIG 420

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A      
Sbjct: 421 KTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG----- 474

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            ++D+    V+ +       E QL   L ++  V+++      P+ LA YLY  A++F  
Sbjct: 475 -EWDMAAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSR 528

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            +      P L+   A        RLQL       +  GL+++G++
Sbjct: 529 FY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|150389500|ref|YP_001319549.1| arginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|226701371|sp|A6TNX2|SYR_ALKMQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149949362|gb|ABR47890.1| arginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 566

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 130/569 (22%), Positives = 244/569 (42%), Gaps = 84/569 (14%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIE 111
           L++     P  IAE +VA+I++  D + V   G G++N +++  +Y + ++  ++  G +
Sbjct: 46  LAKTFRKAPQVIAEELVAKIQLTDDFEKVDNTG-GYLNFFVNRNTYAKAVIQEVLSKGDQ 104

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   +G+G  + I++ + N   P HVGH R  V+G++L  +  F GY      ++ D G
Sbjct: 105 YGSRNLGEGKNICIDYSAPNVAKPFHVGHLRSTVIGNSLYRIYDFLGYNCIGINHLGDWG 164

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWL 230
            Q   + ++         Y N  D  E          + KE  +   +  + F +E +  
Sbjct: 165 TQFGKVIVA---------YKNWGDKAE----------IEKEPINTLLALYVKFHDEAEKN 205

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEG 289
           P ++D +     K+ + D +AL++    F SE          + D+  D+ + + +    
Sbjct: 206 PDLEDEARGWFTKMEKGDEEALSLWK-WFSSETIKELKKIYALLDVHFDHYSGESFY--- 261

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR------PLL--KSDGSYTYFAADLA-- 339
                  K     D   KQ L + +   + VD       P L  K DGS  Y   D+A  
Sbjct: 262 -----NDKMDVVIDELNKQNLLKESQGANIVDLEEYNMPPCLVQKKDGSTLYATRDIAAA 316

Query: 340 --------YFKCKYERGFDN---------MIYVMGSDHSGYVK-----RLEAVAAAVSEK 377
                   + KC Y   +           +I +MG D +  ++     R+      +  +
Sbjct: 317 IYRKNTFNFEKCLYVTDYSQNLHFAQWFKVIELMGYDWAKDIEHISFGRVTHEGRRIQSR 376

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K  + VLL E++    + +   + ++  +      V  +VG  ++ F  L   N+ + D 
Sbjct: 377 KGSV-VLLEEVLNGAVERISEIIEEKNPNVENKEQVAKDVGIGAIVFNDL--SNNRIKDI 433

Query: 438 DFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            F      S E     YVQY +AR  S+ R+A+    D          I      D   +
Sbjct: 434 SFSWDTAFSFEGETGPYVQYTHARASSVLRKAEVAITDH---------INAAHLTDDVTM 484

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            +I  + ++P+VI +A    EP  +  ++ ++A  F+  +    ++P L      + +L 
Sbjct: 485 NVIKTIEQFPQVIVDAQRKNEPSIITRHIVNIAQAFNRFY---HDHPIL----VEDEELK 537

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           M RL +V AV  +++ GL++IG+++P +M
Sbjct: 538 MARLAVVQAVKQVLSVGLSLIGIKAPEKM 566


>gi|223997646|ref|XP_002288496.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975604|gb|EED93932.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 602

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 146/606 (24%), Positives = 242/606 (39%), Gaps = 112/606 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    NAAM L++  GL+P   A  IV  +K     D++     IAG GFINL     YL
Sbjct: 36  GDYQCNAAMSLAKSAGLNPRECASKIVDGLKAIEGFDTIMEEPEIAGPGFINLRFKDGYL 95

Query: 99  RKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
                 + +   + GR  I       K+ ++F S N    MHVGH R  ++GDTL++L+ 
Sbjct: 96  AGAAGKMAMDAEDGGRLAIPVTKNKQKIIVDFSSPNIAKEMHVGHLRSTIIGDTLSNLLT 155

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           FSG++V R  ++ D G Q   L   +   + +AL    S            K+V  +L D
Sbjct: 156 FSGHDVLRLNHVGDWGTQFGMLVEHLRDEFPEALDKESS------------KNV--DLGD 201

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                +L    +K   + +++ V+A   ++K+   D +AL     +  +     R +   
Sbjct: 202 LV---MLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESLCAA----SRVEYQK 254

Query: 273 IRDI--IDNLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           I D+  I  L  +G  +      G++   +S+           +        D    P+L
Sbjct: 255 IYDLLSIKGLNERGESFYNPYLVGVIEDLESQGLAVESEGATAVFLDGYTNRDGSPLPML 314

Query: 326 --KSDGSYTYFAADLAYFKCKYE-------RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
             KSDG + Y   DLA  + + +          D ++YV     +G  +  E V AA   
Sbjct: 315 VRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKADRVLYVT---DAGQSQHFEMVFAAA-- 369

Query: 377 KKAQINVLLCELVRLY---------RDGMPIKMSKRAGDFITLRHVVDE----------- 416
           KKA     + E + L           DG   K + R+GD + L+ ++DE           
Sbjct: 370 KKAG---FIAEPISLEHVPFGLVQGEDGK--KFATRSGDTVKLKDLLDEAVKIAGEDMKS 424

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V++  L         F + ++   +  N   Y+ YA
Sbjct: 425 RMDNPDQELSEALNDVAKTVGIGAVKYADLSMNRESNYKFSYGRMLSLNG-NTAPYMLYA 483

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATI 514
           YAR   I R+A     D   +       P+ S+   S   E QL+ +L + P ++     
Sbjct: 484 YARICGIVRKATGQSEDTKVEW------PEASDIIISHDAEKQLVRNLVKLPDILSEVET 537

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P +L  YL++ +  F+  + +   N       A   +L   RL L    A+ I   +
Sbjct: 538 DLYPNRLCDYLFETSQKFNQFYENCSVN------NAETPELKASRLSLCTVSAATIRLLM 591

Query: 575 NIIGVE 580
           N++G++
Sbjct: 592 NLLGIQ 597


>gi|213647449|ref|ZP_03377502.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213857447|ref|ZP_03384418.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289824037|ref|ZP_06543635.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 516

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 223/548 (40%), Gaps = 88/548 (16%)

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHV 138
           V IAG GFIN++L P++L + +   + S     R  + + T+  I  ++ + N    MHV
Sbjct: 14  VEIAGPGFINIFLEPAFLAEQVQQALTSD----RLGVSQPTRQTIVVDYSAPNVAKEMHV 69

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R  ++GD     + F G+ V R  ++ D G Q   L   + W  +Q    N  D+  
Sbjct: 70  GHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMAL 125

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
               G Y        A K+  E   F E     +VK   +Q+     R+  + L    DI
Sbjct: 126 ADLEGFYRD------AKKHYDEDETFAERARNYVVK---LQSGDTYFREMWRKLV---DI 173

Query: 259 FISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            ++++   + R + +  RD +   +    +  GI+   K+K     + +   ++F     
Sbjct: 174 TMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFK 232

Query: 317 ---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VK 365
              GD +   + K DG Y Y   D+A  K +YE    D ++Y + S    +       V+
Sbjct: 233 NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVR 292

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +   V  +V  +     ++L       +DG P K   R G  + L  ++DE         
Sbjct: 293 KAGYVPDSVPLEHHMFGMMLG------KDGKPFK--TRTGGTVKLADLLDEALERARRLV 344

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             VG  +V++  L +  +    FD+  +    + N   Y+QYAY
Sbjct: 345 AEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAY 403

Query: 459 ARCRSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            R  S+FR+A     D+D   L    VI  E      E QL   L ++   +        
Sbjct: 404 TRVLSVFRKA-----DIDEQALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGT 454

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ +  YLYD+A +F G + H         + A N  +   RL+L    A  +  GL+ +
Sbjct: 455 PHVMCAYLYDVAGLFSGFYEH------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTL 508

Query: 578 GVESPNEM 585
           G+E+   M
Sbjct: 509 GIETVERM 516


>gi|325142687|gb|EGC65068.1| arginyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198629|gb|ADY94085.1| arginyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 572

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPES 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|323350712|ref|ZP_08086373.1| arginine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123132|gb|EFX94823.1| arginine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 562

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      D V   G  ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS + +  +++  ++  G +YG+   G    + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  Q+A+  N    P      +Y++ + 
Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+ +  S   L+     W   ++D   +A  + +  RD+ L   N  +++   E D   
Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     D+             +D + P 
Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   +YV+G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    EP  +A Y   L
Sbjct: 464 N----------FHPDAKATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L ++ A ++   L ++GVE+P +M
Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562


>gi|170017359|ref|YP_001728278.1| arginyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|229470720|sp|B1MZ82|SYR_LEUCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169804216|gb|ACA82834.1| Arginyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 563

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 245/590 (41%), Gaps = 91/590 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IV RI  D       +A   ++N +L
Sbjct: 27  LESPKSSDLGDVAF-PTFTLAKLLRQAPQQIASDIVNRI--DQSNFEKVVATGPYVNFFL 83

Query: 94  SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
                 +  L +I+  G  +G N  G G  V I+  S N   PM +GH R  V+G+ LA+
Sbjct: 84  DKKMTSQATLKTILTQGAAFGDNNDGDGANVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           + A +GY   +  ++ D G Q   L       Y    +  ++++     P   L     E
Sbjct: 144 ITAKNGYHPIKINHLGDWGTQFGKLI------YAYKTWGTEAEVKAD--PIATLLRYYVE 195

Query: 213 LADKYS-SELLNFPEEKWLPIVKDYSVQA--MMKIIR-DDLKALNIQHD-IFISEDDFHR 267
             +K    + LN     W   ++D   +A  +    R + LK     +D + IS D F+ 
Sbjct: 196 FHEKAKIDDSLNDAGRAWFKKLEDGDEEAHQLWTWFRAESLKEFTEIYDRLEISFDSFN- 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  ++D LA +  + E       S+  Q  D+          M+        
Sbjct: 255 GEAFYNDKMDKVVDMLAEKSLLVE-------SQGAQIVDLSDINPNLTPAMIK------- 300

Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370
            ++DG+  Y   DLA   Y K  Y   F   +YV+G +   +  +++AV           
Sbjct: 301 -RTDGATLYMTRDLAAAVYRKETY--NFAKSLYVVGGEQREHFVQMKAVLSLMGFDWADD 357

Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                          +S +K  + VLL +++    D    ++ ++  D      V ++VG
Sbjct: 358 VEHIAFGLITFNGKKMSTRKGDV-VLLKDVLNDAHDLALKQIQEKNPDLADKATVAEQVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475
           + +V F  L    +   DF+  +V + +    P  YVQY  AR +SI R+A       +L
Sbjct: 417 AGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKANTAVSVDEL 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D             DT+   +I  L ++P +++ A   +E   +A Y   L+  F+ +
Sbjct: 475 NLD-------------DTATWDIITTLNQFPTIVQRAWQQREASIIAKYALSLSRAFNKY 521

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++ +       +   + +L   RL LV AV  I++  L ++GV++P EM
Sbjct: 522 YANSK-------ILLPDDQLNA-RLALVKAVTIILSESLRLLGVKAPEEM 563


>gi|228997281|ref|ZP_04156904.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228762476|gb|EEM11400.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 562

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 142/611 (23%), Positives = 250/611 (40%), Gaps = 133/611 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG---FI 89
           +IE P+    G  +    M L++     P  IA+ I  ++      +S F   K    ++
Sbjct: 27  LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKLN-----NSFFTKVKAVGPYV 80

Query: 90  NLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N++ +   +   +L +I+V   EYG+   G+   V I++ S N   P  +GH R  ++G+
Sbjct: 81  NVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPNIAKPFSMGHLRSTMIGN 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +L  +    GYEV    YI D G Q   L  +    Y++  + N+  + E     ++  +
Sbjct: 141 SLKHIAEKCGYEVVGINYIGDWGTQFGKLITA----YKK--WGNEELVKEDPIRELFKLY 194

Query: 209 VGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFI 260
           V       +  E+  +PE       W   ++D   +A+        + LK  +  +++  
Sbjct: 195 V------HFHEEVKEYPELEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLG 248

Query: 261 SEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            E    +G+      + D +D L  +G + E       S   Q  +++++ +        
Sbjct: 249 VEFTNFQGEAFYNDKMGDFVDILEEKGLLEE-------SDGAQVVNLEKEDM-------- 293

Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                P L  KSDG+  Y   DL    Y +  YE  FD  +YV+G++ S +  +   V  
Sbjct: 294 ----PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLK 347

Query: 373 AVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAG----------------------- 405
            +     +  A +   L     + +DG   KMS R G                       
Sbjct: 348 KLGYNWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAITLAERNIEEK 400

Query: 406 --DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462
             D      V  +VG  +V F  L  +    ++F   K +K + +  P  YVQY +AR  
Sbjct: 401 NPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQYTHARAC 458

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL--------IVHLAEYPRVIENATI 514
           SI R+                   + +EF+T   QL        I  L  +P+V+E A  
Sbjct: 459 SILRK-------------------ENAEFETEAFQLNDDHSWSTIKLLNRFPQVVETAFF 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A YL D+A  F+ ++ +      +R ++ +  K +  RL LV+ V  ++  GL
Sbjct: 500 KNEPSHIAKYLLDVAQAFNKYYGN------VRILEEDKEKES--RLALVYVVTIVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++G+ +P EM
Sbjct: 552 RLLGMGAPEEM 562


>gi|124024435|ref|YP_001018742.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166232822|sp|A2CDB7|SYR_PROM3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123964721|gb|ABM79477.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 603

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 246/602 (40%), Gaps = 104/602 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    NAA+ L++PL   P  IA  IV ++ +D   +++     IAG GFINL + P  L
Sbjct: 47  GDFQANAALPLAKPLKQPPRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECL 106

Query: 99  RKILSSIVVSG-----IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              + + +        +  G N   + T V ++F S N    MHVGH R  ++GD+LA +
Sbjct: 107 AAEVQARLADARLGVPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARV 166

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212
           + F G+ V R  ++ D G Q   L   +     +AL   D+ DL +     V+ +   + 
Sbjct: 167 LEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLV---VFYRQAKQR 223

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDFHRGD 269
             D  + +  +  E   L      S++A   +    R + + +  + D+ ++E    RG+
Sbjct: 224 FDDDEAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNE----RGE 279

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-- 324
               + +  ++++L   G +                  D  Q +F   + G D  +PL  
Sbjct: 280 SFYNAYLESVVEDLNVSGLLVSD---------------DGAQCVFLEGVTGKD-GKPLPV 323

Query: 325 --LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
              KSDG + Y   DLA  + ++       G   +IYV  +  + +   +  VA  A   
Sbjct: 324 IVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI 383

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
               ++  +   LV+   DG   K+  RAGD + LR ++DE                   
Sbjct: 384 PDAGRLQHVPFGLVQ-GEDGK--KLKTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRD 440

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V++  L +       F F ++    + N   Y+ YA  R   I
Sbjct: 441 EDESFIEQVATTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGI 499

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R+  D+           +V   E +F +T E  L+  L ++  VI        P +L  
Sbjct: 500 ARKGGDL-----------DVTTAELQFSETQEWALVRELLKFDAVIAEVEEELLPNRLCT 548

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L+ VF+  +    + P L+  Q +       RL L    A  +  GL+++G+ +  
Sbjct: 549 YLFELSQVFNRFYD---QVPVLKAEQPSRS----CRLALCRLTADTLKLGLSLLGIPTLE 601

Query: 584 EM 585
            M
Sbjct: 602 RM 603


>gi|291529278|emb|CBK94864.1| arginyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 597

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 133/610 (21%), Positives = 251/610 (41%), Gaps = 105/610 (17%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C       N AM  ++     P  I++ + A ++ D   +SV     GF+N+ +  
Sbjct: 33  RPDLC---EFQCNGAMAAAKEYKCAPFMISDKVAALLESDEMFESVESVKPGFLNIKMDT 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L K ++ +      YG     K   + +++   N   P+HVGH R AV+G+++  +  
Sbjct: 90  AFLAKYMNDMKDDEGRYGLEKAKKPLTIVVDYGGPNVAKPLHVGHLRSAVIGESVKRIAK 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204
           F G+ V  + ++ D G Q+  +   +  R    +Y ++S    G YP            +
Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELRERKPDLVYFDES--YTGEYPKEAPFTISELEDI 207

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258
           Y    GK  +D+   E      ++     + Y   +  +M +   DLK     LN+  ++
Sbjct: 208 YPTASGKSKSDESFKEAALLATKELQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFEL 267

Query: 259 FISEDDFHRGDPSP-IRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           +  E      D  P +  +++ +  +G+ +  EG L         K D D K++      
Sbjct: 268 WKGE-----SDAQPYVSGMVEMMKEKGFAHMSEGALV-----VDVKEDTDTKEI------ 311

Query: 316 VGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA 371
                  P   +LKSDG+  Y   DLA    +  E   D +IY+  +  S +  ++   A
Sbjct: 312 -------PPCIILKSDGASLYSTTDLATLVMRMKENNPDRVIYLADARQSMHFIQVFRCA 364

Query: 372 AAVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
                +K  I     ELV +       +DG P K   R G  + L +++ E+  + +  +
Sbjct: 365 -----RKTGIVPDTTELVHIGFGTMNGKDGKPFKT--RDGGVMRLEYLLKEIDDEMLNKI 417

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNV 484
              +K  E L+ D  + ++ +K   +  V+Y     ++    +KD   D+D F  F  N 
Sbjct: 418 KENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLSNQA----SKDYIFDIDRFTSFEGNT 473

Query: 485 IP----------------QESEFDTSELQ-------------LIVHLAEYPRVIENATIA 515
            P                +    D S L+             L++ LA++   IE+A   
Sbjct: 474 GPYILYTIVRIKSILSKYEAKGGDISALKDAIMPAVNAGQKNLMLSLAKFNATIESAYEE 533

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+K+  Y+Y+LA+ F+G +         + +   N +L    + L+     I+ + ++
Sbjct: 534 SAPHKICAYIYELANAFNGFYHD------TKILSEENEELKKSYISLLVLTKEILEACID 587

Query: 576 IIGVESPNEM 585
           ++G  +P+ M
Sbjct: 588 MLGFSAPDRM 597


>gi|324507191|gb|ADY43051.1| Arginyl-tRNA synthetase [Ascaris suum]
          Length = 756

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 146/589 (24%), Positives = 250/589 (42%), Gaps = 85/589 (14%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N++M++S+ LG       P  +A++I+  I     ++ V +AG G++N++L+   
Sbjct: 207 GDYQFNSSMVISQKLGQRGIKTPPRDVAKVILDNIPPCEKIEKVEVAGPGYVNVFLNKKA 266

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +  I++   + G+   R  I K  +V ++F S N    MHVGH R  ++GD++  L    
Sbjct: 267 IAAIIARTAIKGVSMPR--ISK-RRVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFELV 323

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  +I D G Q   L   +  R+   L    ++ P    P   L+   KE   ++
Sbjct: 324 GFDVIRLNHIGDWGTQFGMLIAHLQNRFPNFL----TETP----PIADLQAFYKESKKRF 375

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDI 276
             +      EK+     D  V+ +     D +KA  +  D+  S  DF R  D   IR I
Sbjct: 376 DED------EKFKARAHDCVVK-LQSYDADFVKAWQMICDV--SRKDFTRIYDRLDIRII 426

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
               +    +   ++     K   K D D ++L+F S   G ++   ++KSDG  TY  +
Sbjct: 427 ERGESFYRNMMADVVRELDEKGVLKLD-DGRKLMFPS---GCEIPLTVVKSDGGNTYDTS 482

Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DLA  K + E    D +IYV+ S  S +++ + A A  +   K       CE  R+    
Sbjct: 483 DLAAIKHRLEVEKADWIIYVVDSGQSLHLETIFAAARDLGWYK-------CEEKRVEHVS 535

Query: 396 MPI-------KMSKRAGDFITLRHVVDE-----------------------------VGS 419
             +       K   R+GD I L  ++DE                             V  
Sbjct: 536 FGLVLGEDRKKFKTRSGDTIRLTDLLDEGIRRAAAKLQEKERDKVMSPQELEEARDAVAY 595

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA---KDIFPDLD 476
             V++  L +  ++   F F K+ +  + N   Y+ YAYAR RSI R A   ++   D  
Sbjct: 596 GCVKYADLSQTRTQDYVFSFDKMLD-DRGNTAVYLLYAYARIRSICRNAGISREQIIDYA 654

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            +L P   +P E E   +E +L   + ++   I         +++  Y+Y LA+ FH  +
Sbjct: 655 QNL-PEGALPLEHE---AEYKLAKTILKFSDCILTVLDTLFLHQVCDYVYSLATTFHDFY 710

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      + R     N  +   RL L    A ++ +   I+G+ +   M
Sbjct: 711 NDCYVIHKDR---EGNTTIYYHRLVLCQVTADVMANCFQILGIRNVQRM 756


>gi|90580068|ref|ZP_01235876.1| arginyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438953|gb|EAS64136.1| arginyl-tRNA synthetase [Vibrio angustum S14]
          Length = 576

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 134/609 (22%), Positives = 238/609 (39%), Gaps = 135/609 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100
           G    N  M +++ LG +P   A+ ++  +++D   + V IAG GFIN++L+ ++L +  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVIDCLELDGIAEKVEIAGPGFINIFLNKAWLAERG 96

Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +    +    E  +N++       +++ + N    MHVGH R  ++GD +   + F 
Sbjct: 97  EEALKDERLAVNTETAQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G+ V R  ++ D G Q   L                    L  F+R  + LY+ D +  +
Sbjct: 150 GHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMDISDLEGFYRESKVLYDEDEEFGK 209

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G E           +  EKW  +V   ++         D  ++++  D 
Sbjct: 210 TARNFVVRLQSGDE-----------YCLEKWKQLV---AITLKQNQRNYDRLSVSLTDDN 255

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFR 312
            + E  ++   P  + D    L  +G   E        L   K+K               
Sbjct: 256 VMGESMYNDMLPGVVAD----LKEKGLAVESDGAIVVYLDEYKNKD-------------- 297

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------V 364
               G+ +   + K DG Y Y   D+A  K +YE+   D ++Y + S    +       V
Sbjct: 298 ----GEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVLYFIDSRQHQHLMMAWEIV 353

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           ++   V  +VS +     ++L       +DG P K   RAG  + L  ++DE    + + 
Sbjct: 354 RKAGYVPESVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAVERANK- 404

Query: 425 MMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQY 456
            ++  KN EL           +     K  + SK                  N   Y+QY
Sbjct: 405 -LIEEKNPELSTEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQY 463

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           AY R  SIF++A     DL   +    VI      D  E  L+  L ++   +++     
Sbjct: 464 AYTRVASIFKRANVELVDLTHPI----VIT-----DEKEQALLSKLLQFEEAVQSVAREG 514

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P+ +  YL++LA +F   +      P L   +A    +   RL+L    +  I  GL++
Sbjct: 515 QPHLMCTYLFELAGMFSSFYEAC---PILNAEEA----VKQSRLKLALLTSKTIKQGLDL 567

Query: 577 IGVESPNEM 585
           +G+E+   M
Sbjct: 568 LGIETLERM 576


>gi|50284863|ref|XP_444859.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524161|emb|CAG57752.1| unnamed protein product [Candida glabrata]
          Length = 605

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 129/587 (21%), Positives = 227/587 (38%), Gaps = 108/587 (18%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L R  G +P  IA     +      ++ V   G  F+  +  P +L K ++  ++  G E
Sbjct: 73  LVRTKGSNPREIATEWAEKFPCGDFLEKVEANG-AFVQFFFKPEFLYKTVIPDVITRGEE 131

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   +    K+ IEF S N   P H GH R  ++G  L++L    G++VTR  Y+ D G
Sbjct: 132 YGACKMVDNKKIIIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKLGWDVTRMNYLGDWG 191

Query: 172 AQINTLALS--------------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            Q   LA+                     V+ R  + +      LPE        +   K
Sbjct: 192 KQFGVLAVGFERYGDEEKLAKDPIHHLYEVYVRINKDIEEEGDSLPESESTNGKAREYFK 251

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + D     L      K     +D+S++  +    D    LNI++D++  E    +    
Sbjct: 252 RMEDGDPEAL------KIWKRFRDFSIEKYI----DTYARLNIKYDVYSGESQVSK---E 298

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGS 330
            ++  +     +   +E                DR   L   T     + + ++ KSDG+
Sbjct: 299 SMQTALKMFHEKNLTHE----------------DRGATLIDLTKFNKKLGKVIVQKSDGT 342

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG------------YVKRLEAV---- 370
             Y   D+     +YE+  FD MIYV+ +    H+             +  +L+ V    
Sbjct: 343 TLYLTRDVGAAMDRYEKYHFDKMIYVIATQQDLHTAQFFEILKQLGFDWANKLQHVNFGM 402

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMML 427
              +S +K  + V L  ++   ++ M   M K    +  + +   V D VG  +V    +
Sbjct: 403 VQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEAKYAQIDNPDEVADLVGISAVMIQDM 461

Query: 428 WRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
             K     +F + ++   +    P  Y+QYA++R RS+ R A +              IP
Sbjct: 462 QSKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSVERNAAE--------------IP 505

Query: 487 QE--SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +E  +  D S+L+      L+  L +YP V+ NA    EP  +  YL+ L       +  
Sbjct: 506 KEKWASADFSQLKEPAAALLVRLLGQYPDVLRNAMKTNEPATVVTYLFKLTHQVSSCYD- 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +V     ++   RL L  A   ++ +G+ ++G+     M
Sbjct: 565 ------VLWVAGQTEEVATARLALYGAARQVLYNGMRLLGLTPVERM 605


>gi|257466459|ref|ZP_05630770.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917616|ref|ZP_07913856.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691491|gb|EFS28326.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 570

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/579 (21%), Positives = 235/579 (40%), Gaps = 83/579 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM+ S+ +G +P  IAE I   +  +  ++ + IAG GFIN++L  +YL   +
Sbjct: 39  GDFQCNFAMMNSKIIGKNPRMIAEEIQQNLIENEVIEKLEIAGPGFINIFLKEAYLSSFI 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I     E+  + + +   V I+F S N    MH+GH R  ++GD +  +  + GY V 
Sbjct: 99  KKI--GKEEFDFSFLDRKGDVIIDFSSPNIAKRMHIGHLRSTIIGDAICRIYRYLGYHVV 156

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYY----PGVYLKHVGKELADKY 217
            + +I D G Q   L +    W  + A   N  +  E  Y             +E A   
Sbjct: 157 GDNHIGDWGTQFGKLIIGYHKWLDKDAYQRNAIEELERVYVKFSQEAEEHPELEEEARLE 216

Query: 218 SSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +L +  EE    W   +K  S++   K+       L++  D F  E  +H   P  ++
Sbjct: 217 LKKLQDGDEENHNLWKEFIK-VSMEEYQKL----YDRLDVHFDTFYGESFYHPIMPEVVK 271

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D    +      ++  P+ +    C + +K                    DG++ Y 
Sbjct: 272 ELVDKGIAKEDDGAKVVFFPEEENLFPCIVQKK--------------------DGAFLYA 311

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +D+A  K +      +++IY+       + K+   V   +     + +V     +  + 
Sbjct: 312 TSDIATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVKKYHVWFG--IMRFA 369

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG+    S R G+ I L  ++DE                           VG  ++++  
Sbjct: 370 DGV---FSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQHIAEVVGVGAIKYAD 426

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +     + F++ K+    + N   Y+QY+YAR +S+  +AKD+      D     +I 
Sbjct: 427 LSQNRQSPIIFEWDKIL-SFEGNTAPYLQYSYARVQSVLDKAKDLGKAATEDTC---LIL 482

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +    D  E  L  ++  +P  +  A    +P  +A YLYDL+   +  +++    P L 
Sbjct: 483 K----DKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNC---PILN 535

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   +   R  L      II  GL+++G+++ + M
Sbjct: 536 ----QEDDILKSRAYLAKQAGEIIKQGLSLLGIQTLDRM 570


>gi|125625076|ref|YP_001033559.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166232798|sp|A2RNI8|SYR_LACLM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|9295534|gb|AAF86984.1|AF282249_3 ArgS [Lactococcus lactis subsp. lactis]
 gi|124493884|emb|CAL98878.1| ArgS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071881|gb|ADJ61281.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 564

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 140/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+    G L+   A  L++ L   P  IA  I    KID       IA   ++N +
Sbjct: 27  IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   +   +++  ++  G  YG   IG+G  V I+  + N   P  +GH R  V+GD++A
Sbjct: 84  LDKNATASEVIREVLAEGEHYGDANIGEGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209
            +    GY+  +  ++ D G Q   L ++ + +Y  +  +  N  D     Y  +  +  
Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202

Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                D+   +    +   +E+ L I K +S  ++++  R   K L +  D F+ E  + 
Sbjct: 203 EDSEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNRIYGK-LGVTFDHFMGESFY- 260

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 +  I+++L  +  ++E       SK     D+++  L             P L 
Sbjct: 261 ---SDKMDAIVEDLENKNLLHE-------SKGALIVDLEKYNL------------NPALI 298

Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379
            K+DG+  Y   DL   AY K  +   F   +YV+G + + + K+L+AV   A       
Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
            ++V    + +  +     K S R G  + L   +DE                       
Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +V+F  L    +   DFD  + V  + +  P  YVQYA+AR +SI R+A     
Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            ++ D     V       D    +++  L E+P +++ A    EP  +A Y   LA  F+
Sbjct: 467 KVNIDNISLVV------SDAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFN 520

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R       +  ++ +L   RL L+ A + ++   L ++GV +P  M
Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564


>gi|294635811|ref|ZP_06714268.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090846|gb|EFE23407.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 577

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 246/593 (41%), Gaps = 102/593 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ + + P  +AE +VA + +D     V IAG GFIN++L  ++L   +
Sbjct: 37  GDYQANGIMAAAKKMAMPPRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLADQV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  ++    G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  DA-ALADPRLGVARVAPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           R  ++ D G Q   L                    L  F+R  +  Y+ D+   E    G
Sbjct: 155 RANHVGDWGTQFGMLIAYLERVQSESQAGEMALADLEAFYREAKKHYDEDAAFAE-RARG 213

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFIS 261
             +K  G    D+Y  E+       W  +     V   M+  + +   LN+    D  + 
Sbjct: 214 YVVKLQG---GDEYCREM-------WRKL-----VDITMRQNQRNYDRLNVTLTDDDVMG 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++   P     I+ +L  +G   E       S+      +D     F++   G+ + 
Sbjct: 259 ESLYNPMLPG----IVADLKAKGLATE-------SEGATVVFLDE----FKNKE-GEPMG 302

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAA 373
             + K DG Y Y   D+A  K +YE  G + ++Y + S    +       V++   V  +
Sbjct: 303 VIVQKKDGGYLYTTTDIACAKYRYETLGANRILYYIDSRQHQHLMQAWAIVRKAGYVPES 362

Query: 374 VSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFIT----------LRHVV 414
           VS +     ++L +  + +  R G  IK+       ++RA   I           L+ +V
Sbjct: 363 VSLEHHMFGMMLGKDGKPFKTRAGGTIKLADLLDEATERAAKLIADKNPELSGDELKELV 422

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF++A      
Sbjct: 423 EVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----G 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVF 532
           +D +     VI  E      E  L   L ++   I   T+A+E  P+ +  YLY++A +F
Sbjct: 477 IDENSLSGAVILTEER----EKALATRLMQFEETI--LTVAREGTPHVMCAYLYEVAGLF 530

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +           + A++  +   RL+L    A  + +GL+ +G+++   M
Sbjct: 531 SSFYEA------CPILNADDEHVRASRLKLAALTARTLKTGLDTLGIKTVERM 577


>gi|319940118|ref|ZP_08014472.1| arginine-tRNA ligase [Streptococcus anginosus 1_2_62CV]
 gi|319810832|gb|EFW07159.1| arginine-tRNA ligase [Streptococcus anginosus 1_2_62CV]
          Length = 562

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 242/600 (40%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KID       +A   ++N +
Sbjct: 26  LLEQPKSSELGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDSTNFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  +++  IV  G +YG+   G G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSKISAQVIKEIVKEGNDYGQQDEGHGENITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D          LK   
Sbjct: 143 NIFRKLGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+     W   ++D   +A  + +  RD+ LK  N  + +   E D   
Sbjct: 195 RINAEIETDPELDDEGRLWFKKLEDGDPEATELWQWFRDESLKEFNRIYKLLGVEFDSLA 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     ++D             DV+ P 
Sbjct: 255 GEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD-------------DVNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   IY +G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAMYRARTY--NFVKNIYAVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAQSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  L ++ RV++ A    +P  +A Y   L
Sbjct: 464 D----------FKPSAEATYSLDDAESWEIIKLLQDFARVVKRAADNYDPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+  ++H R   E+P               RL L +A A ++   L ++GV++P +M
Sbjct: 514 AQAFNKFYAHTRILDESPERD-----------SRLALSYATAVVLKESLRLLGVDAPEKM 562


>gi|320581220|gb|EFW95441.1| Arginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 680

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 257/624 (41%), Gaps = 133/624 (21%)

Query: 48  NAAMILSRP---LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILS 103
           N  +I+  P   L  D + +A+ +  +  +   +  V   GK F+  + +P +L K ++ 
Sbjct: 104 NGDLIVPLPRLRLKGDLVALAKELAEKFPLGGYLKKVHPEGK-FLQFFFNPEFLLKYVVK 162

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
            ++    ++G   +GKG +V IEF S N   P H GH R  ++G  L++L    G+EV R
Sbjct: 163 DVLERKQDFGSCPLGKGKRVVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYERLGWEVIR 222

Query: 164 EYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-------------H 208
             Y+ D G Q   LA+  F +Y  +  L +N    P  +   VY++              
Sbjct: 223 MNYLGDWGKQFGLLAVG-FEKYGSEAELESN----PIQHLFDVYVRINQDVKAEEEEAEK 277

Query: 209 VGKELADKYSS---------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            G  L D+ SS         + +   +++ L + + +   ++ K I D    LNI++D++
Sbjct: 278 TGVPL-DEASSVDGAARAFFKRMEQGDKQALGLWEKFRALSIEKYI-DTYARLNIKYDVY 335

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
                   G+    ++++D + ++       L   K  T      DR  LL     +G+ 
Sbjct: 336 -------SGESQVSQELMDRVQKE-------LQEKKLVTE-----DRGALLIDFKQLGEK 376

Query: 320 VDRPLL--KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
               +L  KSDG+  Y   DL A  + K +  FD MIYV+ S    +V++   +   +  
Sbjct: 377 KLGKVLVQKSDGTSLYITRDLGAAIERKEKYHFDKMIYVIASQQDLHVRQFFRILEKMGY 436

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--- 433
             A+  +L          G+ + MS R G  + L  +++ V S ++  M   +KN+E   
Sbjct: 437 SWAKDELLHVNF------GLVLGMSTRKGTVVFLDDILETVKSATLEIM---QKNAEKFT 487

Query: 434 ----------LLDFDFCKVKE-QSKENPVF----------------YVQYAYARCRSIFR 466
                     L+      +++ Q K N  +                Y+QYA++R RSI R
Sbjct: 488 LVEDPEAVADLVGISAVMIQDMQGKRNNNYEFSWDRMLSTEGDTGPYLQYAHSRLRSIER 547

Query: 467 -----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQ--------------------LIVH 501
                + K +  DL  +    N++  E +     L+                    L+  
Sbjct: 548 NCNVAEEKLLVADLSIE----NLVGTEDQVKQLGLEPAEQAKKLDILATQREKVESLVRI 603

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L  YP ++  A+   EP  L  YL+ L   F   +   R       V     ++   RL 
Sbjct: 604 LVSYPDILRYASKNHEPSTLVTYLFKLTHQFSSTYKVLR-------VMGEKEQVLEARLA 656

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  +V  ++N+GL ++G+   + M
Sbjct: 657 LFSSVRQVLNNGLRVLGITPVDRM 680


>gi|257452602|ref|ZP_05617901.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059142|ref|ZP_07923627.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684818|gb|EFS21653.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 570

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 123/575 (21%), Positives = 237/575 (41%), Gaps = 75/575 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM+ S+ +G +P  IAE I   +  +  ++ + IAG GFIN++L  +YL   +
Sbjct: 39  GDFQCNFAMMNSKIIGKNPRMIAEEIQQNLIENEVIEKLEIAGPGFINIFLKEAYLSSFI 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I     E+  + + +   V I+F S N    MH+GH R  ++GD +  +  + GY V 
Sbjct: 99  KKI--GKEEFDFSFLDRKGDVIIDFSSPNIAKRMHIGHLRSTIIGDAICRIYRYLGYHVV 156

Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYS 218
            + +I D G Q   L +    W  + A   N  +  E  Y        +H   E   +  
Sbjct: 157 GDNHIGDWGTQFGKLIIGYHKWLDKDAYQRNAIEELERVYVKFSQEAEEHPELEEEARLE 216

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            + L   +E+   + K++ ++  M+  +     L++  D F  E  +H   P  +++++D
Sbjct: 217 LKKLQDGDEENYNLWKEF-IKVSMEEYQKLYDRLDVHFDTFYGESFYHPIMPEVVKELVD 275

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +      ++  P+ +    C + +K                    DG++ Y  +D+
Sbjct: 276 KGIAKEDDGAKVVFFPEEENLFPCIVQKK--------------------DGAFLYATSDI 315

Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  K +      +++IY+       + K+   V   +     + +V     +  + DG+ 
Sbjct: 316 ATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVKKYHVWFG--IMRFADGV- 372

Query: 398 IKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRK 430
              S R G+ I L  ++DE                           VG  ++++  L + 
Sbjct: 373 --FSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQHIAEVVGVGAIKYADLSQN 430

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               + F++ K+    + N   Y+QY+YAR +S+  +AKD+      D     +I +   
Sbjct: 431 RQSPIIFEWDKIL-SFEGNTAPYLQYSYARVQSVLDKAKDLGKAATEDTC---LILK--- 483

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            D  E  L  ++  +P  +  A    +P  +A YLYDL+   +  +++    P L     
Sbjct: 484 -DKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNC---PILN---- 535

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   R  L      +I  GL+++G+++ + M
Sbjct: 536 QEDDILKSRAYLAKQAGEVIKQGLSLLGIQTLDRM 570


>gi|298368627|ref|ZP_06979945.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282630|gb|EFI24117.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 572

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/590 (21%), Positives = 244/590 (41%), Gaps = 88/590 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESTEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHA-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263
             AD     +  L   +E  L + K +        QA+   +   L++ ++  +   ++D
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRSEDVAGESKYNDD 263

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                    ++ ++D+L ++G   E                D  +++F        G+  
Sbjct: 264 ---------LQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
              + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +  A    +
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            A+   +    + + +DG P K   R+GD + L  ++ E                     
Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVTEKNPELGADEA 416

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A  
Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                ++D     V+ +       E QL   L ++  V+++      P+ LA YLY  A+
Sbjct: 475 -----EWDAAAPTVLTE-----PLEKQLATELLKFEDVLQSVADTAYPHYLAAYLYQTAT 524

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +F   +      P L+   A        RLQL       +  GL+++G++
Sbjct: 525 LFSRFY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|222153884|ref|YP_002563061.1| arginyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782986|sp|B9DW76|SYR_STRU0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222114697|emb|CAR43791.1| arginyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 562

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 244/591 (41%), Gaps = 92/591 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G ++   A  L++ L   P  IA  +    KID       +A   +IN +
Sbjct: 26  LLETPKNSDMGDVAF-PAFSLAKVLRKAPQMIAGELAE--KIDAAQYEKVMAVGPYINFF 82

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S + K +L +++     YG+  IG G  V ++  S N   P  VGH R  V+ D + 
Sbjct: 83  LDKSSISKEVLEAVIKEKANYGQQHIGDGQNVTLDMSSPNIAKPFSVGHLRSTVIADAIG 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            + +  GY   R  ++ D G Q   L ++   W  +  +  N  D          LK   
Sbjct: 143 HIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLWGDRATVEANPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHD-IFISEDDFH 266
           +  A+   +  L+    +W   ++D   +A  + +  RD+ L   N  +D + +S D FH
Sbjct: 195 RINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYDKLDVSFDHFH 254

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
               +   D +D   +   + E      +SK  Q  D+++  L             P L 
Sbjct: 255 --GEAFYNDKMDEGIQ---ILEDKNLLKESKGAQIVDLEKYNL------------PPALI 297

Query: 326 -KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQ 380
            KSDG+  Y   D+A    + +R F+    IYV+G + S + K+L+AV   +        
Sbjct: 298 KKSDGATLYITRDMATAMYR-QRTFNFVKNIYVVGQEQSHHFKQLKAVLKEMGFDWSDDM 356

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           I+V    + +  +     K+S R G+ I L   +DE                        
Sbjct: 357 IHVSFGLVTKNKK-----KLSTRKGNIIRLEPTLDEAVSRALTQIEAKNPDLENKEDVAH 411

Query: 417 -VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            VG  +V+F  L        DFD    V  + +  P  YVQY YAR +SI R+A      
Sbjct: 412 AVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYTYARIQSILRKA------ 463

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
              D  P    P  S  D    ++I  L  +   IE A    +P  +A +   LA  F+ 
Sbjct: 464 ---DFTPNEETPY-SLNDAESWEIIKLLQGFAANIERAAEKYDPSIIAKFAIQLAQSFNR 519

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++H       R +  +  + +  RL L +A A ++   L ++GV++P +M
Sbjct: 520 YYAH------TRILDESEERDS--RLALCYATAVVLKESLRLLGVQAPEKM 562


>gi|91201635|emb|CAJ74695.1| similar to arginyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 565

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 243/578 (42%), Gaps = 103/578 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIE 111
           LS+ L   P  IA  +   +     ++ +   G  ++NL+L  +    + L  IV  G  
Sbjct: 46  LSKMLKKPPAKIASELADLLHPVSPINKIEATGP-YLNLFLDKAIFSAVVLKKIVNEGDT 104

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + IGKG  V I++ S N    + V H R A++G+ L ++    GY+     ++ D G
Sbjct: 105 YGCDTIGKGKTVVIDYSSPNIAKHLAVHHLRSALIGNALYNIYGNLGYKCIGINHLGDWG 164

Query: 172 AQINTLALSVF-WRYQQALYNNDSDLPEGYYP-------GVYLKHVGKELADKYSS---E 220
            Q   L ++   W  +    +  +DL + Y           +L+   +E   K  +   E
Sbjct: 165 TQFGQLIVAYRKWGEKDLEQHTITDLNKLYVTFHREAEKDNHLEDEAREWFKKLEAGDAE 224

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
            +   E       KD S++   +I     K L I  D F+ E  ++    + + D +  +
Sbjct: 225 AMELWER-----FKDISLKEFQRI----YKMLGIHFDAFVGESFYN----TMVEDTVSGI 271

Query: 281 ARQGYVY---EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            ++G      + ++   ++     C       L R             K DG+  Y   D
Sbjct: 272 KKKGLACISEQALIVNLEAYNMPPC-------LLR-------------KKDGTTLYATRD 311

Query: 338 LA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +A   Y K  Y+  F+ MIYV+GS+   +  ++  V   +    A   V +   +  +++
Sbjct: 312 IAAAEYRKSVYD--FEKMIYVVGSEQKLHFCQIFKVLELMGYDWASQCVHVDFGLMKFKE 369

Query: 395 GMPIKMSKRAGDFITL-----------RHVVDE--------------VGSDSVRFMMLWR 429
           G   KMS R G  I L           + +++E              VG  +V F  L  
Sbjct: 370 G---KMSTRKGRVILLEDLLIEAVDRIKRIIEEKNPLLKDKEMVARDVGIGAVIFADLST 426

Query: 430 KNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQ 487
           K ++ + FD+  V   + +  P  YVQY +AR  SI R+  KD+  D+D+ L   +    
Sbjct: 427 KRNKDVIFDWDTVLNFEGETGP--YVQYTHARLCSILRKYGKDVTTDIDYPLLNED---- 480

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   + LI +L +YP V+  A    EP  ++ YL D+ +  +  ++  R       
Sbjct: 481 ------DAIHLIKNLWQYPFVVLKAAQFYEPSLVSNYLIDICAGVNKFYNAHR------- 527

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V + +  LT  R+ LV A   II +GL I+G+++P EM
Sbjct: 528 VLSEDEGLTKARILLVDAARQIIKNGLKILGMQAPVEM 565


>gi|121635178|ref|YP_975423.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166232814|sp|A1KUU4|SYR_NEIMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120866884|emb|CAM10643.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|254673245|emb|CBA08256.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 572

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/585 (21%), Positives = 239/585 (40%), Gaps = 78/585 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 ++ ++D+L ++G   E       +K     +   K+        G+     + K
Sbjct: 262 ----DDLQAVVDDLVQKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 305

Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
             G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         +  
Sbjct: 306 QGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGA 363

Query: 384 LLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
                   + +DG P K   R+GD + L  ++ E                          
Sbjct: 364 AFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGK 421

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A       
Sbjct: 422 TVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------ 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F   
Sbjct: 475 EWDADAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRF 529

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 530 Y---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|271500744|ref|YP_003333769.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344299|gb|ACZ77064.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 576

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 235/597 (39%), Gaps = 111/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG+ P  +AE +V  +++D       IAG GFIN++L   +L   L
Sbjct: 37  GDYQANGIMAAAKKLGMPPRQLAEKVVNTLQLDGIAAKTEIAGPGFINIFLDSQWLSAQL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               ++  + G + +   T V +++ + N    MHVG+ R  ++GD     + F G+ V 
Sbjct: 97  EH-ALAAPKLGVSPVEPQTIV-VDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D    E    G 
Sbjct: 155 RANHVGDWGTQFGMLIAHLEDVQNDSTQDLELADLEAFYREAKKQYDDDEVFAE-RARGY 213

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K  G    D+Y   +       W  +V    VQ      R +   +++  +  + E  
Sbjct: 214 VVKLQG---GDEYCRSM-------WRKLVDITMVQNQRSYDRLN---VSLTPENVMGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P    DI+ +L  +G   E       S+      +D  +        G+ +   +
Sbjct: 261 YNAMLP----DIVADLKAKGLAEE-------SEGAIVVYLDEYK-----NKEGEPMGVII 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
            K DG Y Y   D+A  K +YE+ G + ++Y + S    +       V++   V  +VS 
Sbjct: 305 QKKDGGYLYTTTDIACAKYRYEKLGANRVLYYIDSRQHQHLMQAWSIVRKAGYVPESVSL 364

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-- 434
           +     ++L       +DG P K   RAG  I L  ++DE    +    ++  KN E+  
Sbjct: 365 EHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYERA--LTLIAGKNPEMER 414

Query: 435 ---------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQA 468
                    +     K  + SK                  N   Y+QYAY R  SIF++A
Sbjct: 415 TELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVSSIFKRA 474

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L   +    V+  E      E  L   L ++   +        P+ +  YLYDL
Sbjct: 475 GVEESSLTQPI----VLTAE-----HEQALATRLLQFEETVTTVARDGTPHVMCAYLYDL 525

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F G + +         + A+N      RL+L    A  + +GL+ +G+++  +M
Sbjct: 526 AGLFSGFYEN------CPILNADNDSTRQSRLKLALLTAKTLKTGLDTLGIQTVEKM 576


>gi|315634078|ref|ZP_07889367.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477328|gb|EFU68071.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 577

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 135/597 (22%), Positives = 237/597 (39%), Gaps = 110/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++ + ++    +   IAG GFIN++L  ++L   +
Sbjct: 37  GDYQANGIMPAAKKLGLNPREFAQSVLDKAELQDIAEKTEIAGPGFINIFLKDTWLADNI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S   V   + G +   K T V +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 97  SR-AVQDPKLGVHNPEKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKKHYDEDPVFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +VK       M+  + +   LN+       +D 
Sbjct: 215 ----VKLQSGDEYCRTM-------WQKLVK-----ITMQQNQHNYDRLNV---TLTDKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 +P +  I+++L +QG   E  G L     +   K               GD + 
Sbjct: 256 MGESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKD--------------GDPMG 301

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG-SDHSGYVKRLEAVAAAVSEKKAQ 380
             + K DG + Y   D+A  K +YE    N   V   +  S ++++    A  ++ K   
Sbjct: 302 VIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQ----AWLITRKAGY 357

Query: 381 I-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
           + +    E     + L +DG P K   R+GD + L  ++DE                   
Sbjct: 358 VPDSFQLEHKNFGMMLGKDGKPFKT--RSGDTVKLADLLDEAIERAGVLISQKSTALSEQ 415

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF ++
Sbjct: 416 EKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNRS 474

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +    +++            S  D  E  L + L ++   ++       P+ L  YLY+L
Sbjct: 475 QIALSEVEQATL--------SITDEKERALAIKLLQFEEAVQVVGKEGTPHVLCAYLYEL 526

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A VF   + H         +  ++ ++ + RL+L       +  GL+++G+++  +M
Sbjct: 527 AGVFSSFYEH------CPILNNDDHQVKLSRLKLALLTERTLKQGLDLLGIKTVEKM 577


>gi|310658453|ref|YP_003936174.1| arginyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|308825231|emb|CBH21269.1| Arginyl-tRNA synthetase 2 (Arginine--tRNA ligase 2) (ArgRS 2)
           [Clostridium sticklandii]
          Length = 566

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 144/620 (23%), Positives = 260/620 (41%), Gaps = 106/620 (17%)

Query: 18  IDCKIKVEKKILDRI----------VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +D K++V K + ++I          +IE P + A G  +      L++     P  IA+ 
Sbjct: 1   MDFKVEVSKILSEKISDFSYEEILSMIEIPPNAAMGDFAF-PCFKLAKTYRKSPNIIAQE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +   +     + S+  AG G++N Y+    L  +++  ++    ++G+  IG G  V +E
Sbjct: 60  LAQELNRPSYLKSIENAG-GYVNFYVDTILLSSQVIKEVLEKKEDFGKMDIGSGKNVIVE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           F S N   P H+GH R  V+G++L  L  F GY      ++ D G Q   L ++   W  
Sbjct: 119 FSSPNIAKPFHIGHIRTTVIGNSLYKLYKFLGYNTIGINHLGDYGTQFGKLIVAYKGWGN 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMK 243
           ++ + N     P      +Y+++  K  A+    +       +W   ++D   +A  + K
Sbjct: 179 EEEVKN----APIKTLLKLYIEYHEKAEANPQMED----EAREWFKKLEDGDEEATRLWK 230

Query: 244 IIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             R+  L+  +  +D+     D + G+      +  +I+ +  +G + E       S+  
Sbjct: 231 FFREVSLEEFSRVYDMLGISFDSYAGESFYSDKMPAVIELMEEKGVLIE-------SQGA 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIY 354
              D++   +             P L  K DGS  Y   DLA   Y K  Y+  F   IY
Sbjct: 284 HIVDLEPYGM------------PPALIKKRDGSTLYITRDLAAAIYRKKTYD--FYKNIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-KMSKRAGDFITLRHV 413
           V+GS  + + K+   +   +  + A      CE V+    G+    +S R G  + L  V
Sbjct: 330 VVGSQQALHFKQWMKILDLMGFEWAND----CEHVQFGMVGLEEGTLSTRKGRVVFLEDV 385

Query: 414 VD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           ++                         ++G  +V F  L   NS + D+ F   +  S E
Sbjct: 386 LNQAIQKTKEVIIEKNPNLEDIDKVAKQIGVGAVVFQEL--SNSRIKDYTFSWERTLSFE 443

Query: 449 NPVF-YVQYAYARCRSIFRQAKDIFP--DLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
                YVQY +AR  S+ R+A ++ P  ++DF +   N            +++I  L  +
Sbjct: 444 GETGPYVQYTHARACSVLRKA-NLKPSSEIDFSMLGNN---------NDAMEVIRVLGSF 493

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+  A    EP+ +  Y+ DLA  F+  +    +NP L     ++ K+   RL +V A
Sbjct: 494 KSVLLRAADKNEPHHITRYILDLAQAFNKFY---HDNPIL----VDDEKVKAARLAIVEA 546

Query: 566 VASIINSGLNIIGVESPNEM 585
           V   + + L ++G+E+P  M
Sbjct: 547 VRIGLENSLKLLGMEAPERM 566


>gi|15835354|ref|NP_297113.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285526|ref|ZP_06194920.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289537|ref|ZP_06195839.1| arginyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336923|ref|ZP_07225125.1| arginyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878798|sp|Q9PJT8|SYR_CHLMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|7190768|gb|AAF39548.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 563

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 232/587 (39%), Gaps = 106/587 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR--- 99
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L    
Sbjct: 39  GHYQCNDAMKLARALRKSPRAIAEEIVAHIPATP-FSSIEIAGAGFINFTFSKEFLANQL 97

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +I S  +  G       +    KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QIFSQELAKGFP-----VSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G      A  +   Y Q     D              H  + L + Y  
Sbjct: 153 DVLRLNHIGDWGT-----AFGMLITYLQETAQTDI-------------HQLENLTELYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
             + F E+        Y+V A+      D +AL +   I  +SE  F +     I  I+D
Sbjct: 195 AHVRFAEDPEFKKRSQYNVVALQS---GDPQALALWKQICAVSEKSFQK-----IYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  +      D++ K L+  S     +  ++   PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLADVVS--DLESKNLVTLSDGAKCVFHEEFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCEL 388
            Y   D+A  + + ++   D ++ V  S  S + + LEA  +AA     K   + +   L
Sbjct: 302 NYATTDVAAMRYRIQQDHADRILIVTDSGQSLHFQLLEATCLAAGYLPHKGIFSHVGFGL 361

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421
           V    D    K   R+G+ I L+ ++D                            +G ++
Sbjct: 362 V---LDTQGRKFKTRSGENIKLQELLDTAIEKAKESLREHRPEISEEELAYQGPILGINA 418

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L         F F K+  + + N    + YAY R + I R+ K            
Sbjct: 419 IKYADLSAHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRMK------------ 465

Query: 482 RNVIPQE---SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            + +PQ+   S  + +E  L + L  +P V++       P+ L  YLY L + F      
Sbjct: 466 LDTLPQKGPLSIHEPAEETLALTLLRFPEVLDLTLRELCPHFLTDYLYVLTNKF------ 519

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N   R            RL L       + +G++++G+++ + +
Sbjct: 520 ---NAFFRDCHIEGSDYQQERLYLCGLTEKTLETGMHLLGLKTLDHL 563


>gi|116512983|ref|YP_811890.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025141|sp|Q02W95|SYR_LACLS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116108637|gb|ABJ73777.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 564

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 140/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+    G L+   A  L++ L   P  IA  I    KID       IA   ++N +
Sbjct: 27  IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   +   +++  ++  G  YG   IG+G  V I+  + N   P  +GH R  V+GD++A
Sbjct: 84  LDKNATASEVIREVLTEGEHYGDANIGEGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209
            +    GY+  +  ++ D G Q   L ++ + +Y  +  +  N  D     Y  +  +  
Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202

Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                D+   +    +   +E+ L I K +S  ++++  R   K L +  D F+ E  + 
Sbjct: 203 EDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNRIYGK-LGVTFDHFMGESFY- 260

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325
                 +  I+++L  +  ++E       SK     D+++  L             P L 
Sbjct: 261 ---SDKMDAIVEDLENKNLLHE-------SKGALIVDLEKYNL------------NPALI 298

Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379
            K+DG+  Y   DL   AY K  +   F   +YV+G + + + K+L+AV   A       
Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
            ++V    + +  +     K S R G  + L   +DE                       
Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             VG  +V+F  L    +   DFD  + V  + +  P  YVQYA+AR +SI R+A     
Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            ++ D     V       D    +++  L E+P +++ A    EP  +A Y   LA  F+
Sbjct: 467 KVNIDNISLVV------SDAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFN 520

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R       +  ++ +L   RL L+ A + ++   L ++GV +P  M
Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564


>gi|257469475|ref|ZP_05633567.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063719|ref|ZP_07928204.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313689395|gb|EFS26230.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 570

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 126/590 (21%), Positives = 244/590 (41%), Gaps = 105/590 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   TN AM+ S+ +G +P  IA+ ++  ++ +  ++ + IAG GFIN++L   YL ++L
Sbjct: 39  GDFQTNFAMMNSKIIGKNPRVIAQEVLDNLEENNVIEKLEIAGPGFINIFLKSEYLGELL 98

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                   EY  + + +   V I++ S N    MH+GH R  ++GD++  +  + GY + 
Sbjct: 99  KKSRTE--EYDFSFLNREGDVIIDYSSPNIAKRMHIGHLRSTIIGDSIRRIYKYLGYHIV 156

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY------------PGVYLKHV 209
            + +I D G Q   L +    W  ++A   N  +  E  Y                 +  
Sbjct: 157 ADNHIGDWGTQFGKLIIGYRRWLNKEAYKENPIEELERVYVEFSKLSETEPELEEEARLE 216

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K+L D    +  NF    W   +K  S+    K+     K L +  D +  E  +H   
Sbjct: 217 LKKLQD---GDAENFA--LWKEFIK-VSLDEYDKL----YKRLGVHFDTYYGESFYH--- 263

Query: 270 PSPI-RDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
             PI + +++ L  +    E     ++  P+      C + +K                 
Sbjct: 264 --PIMQGVVEELVEKKLAVEDDGAKVVFFPEEDNLFPCIVQKK----------------- 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
              DG++ Y  +D+A  K + E    + +IY+       + K+   +   +     + ++
Sbjct: 305 ---DGAFLYSTSDIATIKFRRETYNINKLIYLTDERQQDHFKQFFRITDMLGWNVEKHHI 361

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                +  + DG+    S R G+ I L  ++DE    +  + ++  KN  L + +  K+ 
Sbjct: 362 WFG--IMRFADGV---FSTRKGNVIRLEQLLDEGKKRA--YEIVQEKNPSLSEEEKDKIA 414

Query: 444 E-------------QSKENPVF---------------YVQYAYARCRSIFRQAKDIFPDL 475
           E             Q++++P+                Y+QY+YAR +SI R+A+    ++
Sbjct: 415 EIVGVGAIKYADLSQNRQSPIIFEWDKILTFEGNTAPYLQYSYARIQSILRKAESEGKNV 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D+       I  E   D  E  L  H+  +P  +  A+   +P  +A YL++L+  F+  
Sbjct: 475 DYS----KEIKIE---DKLERALADHITAFPMAVLKASETFKPNIIADYLFELSKKFNSF 527

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++     P L        ++   R  +       I  GL+++G+++ + M
Sbjct: 528 YNSC---PILN----QEDEILYSRALIAKITGETIKDGLSLLGIKTLDRM 570


>gi|161870367|ref|YP_001599537.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595920|gb|ABX73580.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 581

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 34  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 93

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 94  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 153 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 212

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 213 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 270

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 271 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 311

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 312 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 369

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 370 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 427

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 428 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 483

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 484 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 535

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 536 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 576


>gi|251789870|ref|YP_003004591.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538491|gb|ACT07112.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 576

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 234/605 (38%), Gaps = 127/605 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG+ P  +AE +V  +++D       IAG GFIN++L   +L   L
Sbjct: 37  GDYQANGIMAAAKKLGMSPRQLAEKVVQTLQLDGIAAKTEIAGPGFINIFLDSHWLSAQL 96

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
              + +   GI     L  +   + +++ + N    MHVG+ R  ++GD     + F G+
Sbjct: 97  EHALAAPNLGI-----LPVEPQTIVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGH 151

Query: 160 EVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE--- 198
            V R  ++ D G Q   L                   L  F+R  +  Y+ D+   E   
Sbjct: 152 RVIRANHVGDWGTQFGMLIAHLEDVQNGSASDLELADLEAFYREAKKQYDEDAAFAERAR 211

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           GY        V  +  D+Y   +       W  +V    VQ      R +   +++  + 
Sbjct: 212 GYV-------VKLQSGDEYCRSM-------WRKLVDITMVQNQRSYDRLN---VSLTPND 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E  ++   P    +I+ +L  +G   E       S+      +D  +        G+
Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAEE-------SEGAIVVYLDEYK-----NKEGE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG Y Y   D+A  K +YE+ G D ++Y + S    +       V++   V
Sbjct: 299 AMGVIVQKKDGGYLYTTTDIACAKYRYEKLGADRVLYYIDSRQHQHLMQAWSIVRKAGYV 358

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +VS +     ++L       +DG P K   RAG  I L  ++DE    +    ++  K
Sbjct: 359 PESVSLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYERA--LALIAGK 408

Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462
           N E+           +     K  + SK                  N   Y+QYAY R  
Sbjct: 409 NPEMDRTELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVS 468

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKL 521
           SIF++A              + + Q         Q L   L ++   +        P+ +
Sbjct: 469 SIFKRAG----------VEESSLTQPIALTAEHEQALATRLLQFEETVTTVARDGTPHVM 518

Query: 522 AFYLYDLASVFHGHWSHGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
             YLYDLA +F G +    EN P L     N R+    RL+L    A  + +GL+ +G++
Sbjct: 519 CAYLYDLAGLFSGFY----ENCPILNADSENTRQ---SRLKLARLTAKTLKTGLDTLGIQ 571

Query: 581 SPNEM 585
           +  +M
Sbjct: 572 TVEKM 576


>gi|325128541|gb|EGC51414.1| arginyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 572

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG+   N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGNFQINGVMGTAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPES 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|255714653|ref|XP_002553608.1| KLTH0E02816p [Lachancea thermotolerans]
 gi|238934990|emb|CAR23171.1| KLTH0E02816p [Lachancea thermotolerans]
          Length = 645

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 201/511 (39%), Gaps = 96/511 (18%)

Query: 84  AGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A   F+  +  P +L K+ L  I+    EYG   + +  KV IEF S N   P H GH R
Sbjct: 143 ANGPFVQFFFKPDFLFKVVLPDILTRKEEYGSAPLVQNKKVVIEFSSPNIAKPFHAGHLR 202

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--------------------VF 182
             ++G  L++L    G++V R  Y+ D G Q   LA+                     V+
Sbjct: 203 STIIGGFLSNLYEKMGWDVVRLNYLGDWGKQFGVLAVGFERYGDEEALSKDPIKHLYDVY 262

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R  Q +      LPE        +   K++ D          +E  L I K +   ++ 
Sbjct: 263 VRVNQDITAEGDSLPEDKSTDGQARAYFKKMEDG---------DENALKIWKRFRELSIE 313

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K I D    LNI++D +  E    R     ++  +D    +G  +E              
Sbjct: 314 KYI-DTYARLNIKYDSYSGESQASR---ESMQLALDMFREKGLTHE-------------- 355

Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             DR  LL   T     + + ++ KSDG+  Y   D+     ++++  FD MIYV+    
Sbjct: 356 --DRGALLIDLTKFNKKLGKTIVQKSDGTTLYMTRDVGTAMDRHKKYNFDKMIYVIACQQ 413

Query: 361 S---------------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                           G+ K L+ V       +S +K  + V L  ++   ++ M   M 
Sbjct: 414 DLYTAQLFEVLKQLGFGWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMK 472

Query: 402 KRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYA 457
                +  + +   V D VG  +V    +  K     +F + ++   +    P  Y+QYA
Sbjct: 473 TNKAKYAQIENPDEVADLVGISAVMIQDMQAKRINNYEFKWERMTSFEGDTGP--YLQYA 530

Query: 458 YARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           ++R RS+ R A +I      + DF L            + + + L+  LA+YP V+ NA 
Sbjct: 531 HSRLRSVERNASEITQEKMVNADFSLL----------HEPAAVLLVRLLAQYPDVLRNAI 580

Query: 514 IAQEPYKLAFYLYDL----ASVFHGHWSHGR 540
              EP  +  YL+ L    +S +   W  G+
Sbjct: 581 KTHEPATVVTYLFKLTHQVSSCYDVLWVAGQ 611


>gi|71892230|ref|YP_277963.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|109894973|sp|Q492L0|SYR_BLOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71796336|gb|AAZ41087.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 581

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 137/606 (22%), Positives = 252/606 (41%), Gaps = 103/606 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +++      G+   N  + +S+ L +     A+  +  I ++    ++ I   GFIN+
Sbjct: 27  IQVQQSTKRKFGNYQINGLIAISKKLNIPIEEFAKKFIQFINLNDVAHTIKIEKPGFINI 86

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+  ++   +++I  S    G       T V I++   N    MHVGH R  V+GD++A
Sbjct: 87  FLNTKWISNQINNIF-SASHLGITPATPKTIV-IDYSGPNVAKEMHVGHLRSTVIGDSIA 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL---------------------ALSVFWRYQQALY 190
            +++F G+ V R  +I D G Q   L                      L  F+R  +  Y
Sbjct: 145 RVLSFLGHNVIRANHIGDWGTQFGMLIAYIEKNAQTRFLLNKTIQLSTLEHFYREAKKKY 204

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           + D D  E      Y+  + K   DK+  ++  +  +  + I+ +  +   + I      
Sbjct: 205 DIDPDFAE--LSRNYVLKLQK--GDKHYRQIWKYLVD--ISILNNQDIYVRLNI------ 252

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
             N++    I E  ++   P    DI+ +L  +G     +       T    +    +L 
Sbjct: 253 --NLKKSDIIGESFYNDMLP----DIVSDLKNKG-----LAVTSNGATVVFLENYHNKL- 300

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
                 G      + K DG+Y Y   D+A   ++CK     D +IY + S    ++ +  
Sbjct: 301 ------GTPFGVIIQKKDGAYLYSTTDIACIKYRCKVLHA-DRIIYYIDSRQKQHLIQAW 353

Query: 369 AVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            +A  A   EK   +   +C ++ L +DG P K   RAG+ + L+ ++DE   +  R ++
Sbjct: 354 EIADKAGYIEKSVLLEHHMCGML-LGKDGKPFKT--RAGNALKLKTLLDE-ALERARCLI 409

Query: 427 LWR----------KNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459
           L +          K + ++     K  E SK                  N   YVQYA  
Sbjct: 410 LSKNPNLKYTEINKLAHIISIGAIKYSELSKNRITDYIFDWNNMLNFEGNTAPYVQYACT 469

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  +IF+++K   P+       +N I  E+E    E+ L + L ++  +I   +    P+
Sbjct: 470 RIFAIFKRSKQ--PNFQL---KKNDIQLETE---EEILLAICLLQFEEMIVAVSNQGAPH 521

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  YLY L+ +F   +    EN  +  ++A+N  +   RL+L       + +GLN++G+
Sbjct: 522 ILCSYLYKLSVLFSSFY----ENCPI--IKAHNTHIKYSRLKLALITMRTLKTGLNLLGI 575

Query: 580 ESPNEM 585
           ++   M
Sbjct: 576 KTVRYM 581


>gi|289641668|ref|ZP_06473828.1| arginyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508537|gb|EFD29476.1| arginyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 592

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 244/586 (41%), Gaps = 96/586 (16%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
            +AA+ L+R L  +P  IA  +V   ++D   ++V +AG GFINL+L+ S L ++L  + 
Sbjct: 56  ADAALSLARRLRRNPRDIAAEVVRAAELDDLCETVEVAGPGFINLHLAASALERLLGEV- 114

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGP-----MHVGHCRCAVVGDTLASLMAFSGYEV 161
                +G   +G       E V  + +GP     MHVGH R  ++GD    L+++ G++V
Sbjct: 115 -----FGDERLGVAPVPEPEVVVVDYSGPNAAKEMHVGHLRSTIIGDAAVRLLSWLGHQV 169

Query: 162 TREYYINDAGAQINTLA--LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            R+ +I D G     L   L      + A   +  DL   +Y    +K    E       
Sbjct: 170 VRQNHIGDWGTPFGMLVEHLLDIGESEAAHELSVGDL-NAFYRAARVKFDADE------- 221

Query: 220 ELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPS 271
               F E   L +V+    D + + +  ++  + K     +  Q  + ++E DF RG+ S
Sbjct: 222 ---AFKERSRLRVVRLQAGDPTTRRLWHVLVGESKKYFLTVYSQLGVLLTEADF-RGESS 277

Query: 272 ---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326
               +  ++D L   G +        +      C        F++    DD   PL+  K
Sbjct: 278 YNDQLGPVVDELTELGLL--------RLSDGALCAFPEG---FKNR---DDEPLPLIVRK 323

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI---- 381
            DG Y Y   DLA  + +  +     ++YV+G     + + +  VA      +A +    
Sbjct: 324 RDGGYGYATTDLATIRHRIRDLHATRLLYVVGLPQYQHFEMIYEVAREAGWLRAPVRAEH 383

Query: 382 ----NVLLCELVRL-YRDGMPIKM-------SKRAGDFITLR----------HVVDEVGS 419
               ++L  +   L  R G  +K+         RA D I ++           V   +G 
Sbjct: 384 IGHGSILGADGKMLRTRAGDSVKLVALLEQAVSRAADVIAVKNPGLDAQTRAQVAQAIGI 443

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L    S+   FD  ++      N   Y+QYA+AR  S+FR+A   +P    D+
Sbjct: 444 GAVKYADLSTDRSKDYVFDLDRMLAFDG-NTAPYLQYAHARICSVFRRAGLTYPVAAADI 502

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R   P+E         L V L  +  V+E    + E ++LA YL+ LA+ F   +   
Sbjct: 503 --RIGEPEER-------HLAVQLLSFGDVVEGIVDSLEFHRLAGYLFSLATAFTNFYE-- 551

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LR        +   R+ L       + +GL ++G+ +P  M
Sbjct: 552 -KCPILR----AEEPVRTSRVALCDLTRRALATGLGLLGITAPERM 592


>gi|145297303|ref|YP_001140144.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850075|gb|ABO88396.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 581

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 239/602 (39%), Gaps = 96/602 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ ++R ++ AHG L+TN AM+L++P   +P  +A  I+  +     +  V IAG GFIN
Sbjct: 29  RVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAAAIIENLPASDLIAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    +L   + ++V S     +  +     V +++ + N    M V H R  V+GD  
Sbjct: 89  FFFDQRWLAGQVETMVTSANANVK--LPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVA 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNN 192
           A  + F G++V R  +I D G Q   L                   L  F+   +  Y+ 
Sbjct: 147 ARALEFLGHKVVRANHIGDWGTQFGMLIAYLEKMANEHASDMALKDLEAFYTQAKRCYDE 206

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D    E     V     G E       +L++   E+              +I  D L   
Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQ-------------NQINYDRLNVS 253

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               DI + E  ++   P    +I+ +L  +G   E       S+      +D     F+
Sbjct: 254 LTNKDI-MGESMYNDMLP----EIVADLKAKGLAVE-------SEGATVVFLDE----FK 297

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV------- 364
           +   G+ +   + KSDG + Y   D+A  K +YE  G D ++Y + S    ++       
Sbjct: 298 NK-DGEPMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQHLMQAWTIT 356

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLR---- 411
           ++   V  +V  +     ++L +  R Y  R G  +K+        +RA   +  R    
Sbjct: 357 RKAGYVPESVPLEHHAFGMMLGKDGRPYKTRSGGTVKLVDLLNEAEERATALLESRNSDL 416

Query: 412 ------HVVDEVGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                 +VV+ +   +V++  L +  +   + D+D     E    N   Y+QYAY R +S
Sbjct: 417 SAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDWDMMLSFEG---NTAPYLQYAYTRIQS 473

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IFR+A     ++D      NV   E     +E  L   L ++   +        P+ L  
Sbjct: 474 IFRKA-----NIDASTLIGNVTLNEE----AEEVLAQKLIQFSDAVNGVADKGMPHLLCT 524

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YLY+L+  F   +     N         +      RL L  A A ++  GL ++G+ +  
Sbjct: 525 YLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCTATAKVLKLGLGVLGIHTLE 579

Query: 584 EM 585
            M
Sbjct: 580 RM 581


>gi|156937719|ref|YP_001435515.1| arginyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|166232795|sp|A8AB06|SYR_IGNH4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|156566703|gb|ABU82108.1| arginyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 622

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 243/569 (42%), Gaps = 103/569 (18%)

Query: 87  GFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           GF+N+ L PS+L  + L     S  +YG+       ++ +E  SANP  P+HVGH R   
Sbjct: 87  GFLNVELEPSWLAERALRE--ASREDYGKWSFS--GRLVVEHTSANPVHPLHVGHARNMF 142

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +GD+L  ++   G +V   +YIND G Q+  L   +       L   + + P+ +Y  VY
Sbjct: 143 LGDSLVRILKNWGADVQSRFYINDMGRQVAVLVYGLL--KLGRLEPPEGEKPDHWYGKVY 200

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH-DIFISE-- 262
              V   L +  S    +  +++W  ++K+   +   +I+R+  +  + +  +  +SE  
Sbjct: 201 --SVANALVELNSPSKGDDEKKEWEEVLKELESK-WPEIVREMKEKFDDEDPEAKVSELM 257

Query: 263 DDFHRGDP---SPIRDII--------DNLARQG-----------YVYEGILPPPKSKTTQ 300
             +  GDP      R ++        + + R G            V+ G +    +   +
Sbjct: 258 KKYEEGDPEVKETFRKVVNEVLKGFKETMERVGVNVDKWDWESDLVWSGEVDKIINMAKE 317

Query: 301 KCDMDRKQ----LLFRSTMVGDDVDR-----------PLL--KSDGSYTYFAADLAYFKC 343
           K  +  K     ++F++  + D+V R           PL+  +SDG+  Y   D+AY   
Sbjct: 318 KGLVIEKDGALVMVFKN--LNDEVRRRLRIPKGLQIPPLVLKRSDGTTLYTTRDIAYTIK 375

Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           K+E    D +I V+ ++      +L      +  K+   N++      +   GM  KMS 
Sbjct: 376 KFEEFRADRVINVIAAEQRLPQIQLRLALWELGFKEYAENLIHYAYEMVNVPGM--KMSG 433

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------------FDFCKVKEQS---- 446
           R G  ITL  ++DE     VR ++  R  +E +D            F    V  +     
Sbjct: 434 RRGRMITLDWLLDE-AERRVRELVEGRSEAEDVDEVVKKVAVGAVKFAMVSVSPEKPITF 492

Query: 447 --------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--L 496
                   + N   Y+QY YAR   I R+  +  PDL           + +++  +E   
Sbjct: 493 KWEEVLNFERNSAPYLQYTYARAVGILRKGGE--PDL-----------ERADYSKAEKYK 539

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            +I+ +AE+P V   A    +P  +A YL  LA  F+  +    + P     +  +  L 
Sbjct: 540 DMILSIAEFPEVARKAAEDLKPDLIATYLLSLADKFNEFY---HKEP---VAKEPDEGLR 593

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++L LV AVA+ I  GL ++GVE+P  M
Sbjct: 594 NLKLALVKAVANTIRRGLWLLGVEAPARM 622


>gi|254805273|ref|YP_003083494.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668815|emb|CBA06810.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 572

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHA-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++DNL ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDNLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|269123117|ref|YP_003305694.1| arginyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314443|gb|ACZ00817.1| arginyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 572

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 236/598 (39%), Gaps = 90/598 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  + I+       G   TN AM  ++ LG +P  +A  +V        +  V +AG GF
Sbjct: 24  LTELDIQNATKKEFGDYQTNFAMQKAKMLGKNPRELANDVVENFDGKGVISKVEVAGPGF 83

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN +++   L +    I     EYG   I     V I++ S N    MH GH R  ++GD
Sbjct: 84  INFFINTDLLNQETEKIGKENYEYG---ISNEKIVAIDYSSPNIAKRMHAGHLRSTIIGD 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK 207
            L  +    G+ V  + +I D G Q   L ++   W  + A   N  +  E  Y  V   
Sbjct: 141 ALKRIYRELGFTVYGDNHIGDWGTQFGKLIVAYNNWLDKDAYEANAIEELERIY--VLFS 198

Query: 208 HVGKE---LADKYSSEL--------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              KE   L +K   EL        +N+    W   +   S++   K+     K L+I+ 
Sbjct: 199 QKAKEDPTLEEKAREELRKVQAGDPVNYA--LWKEFITS-SLREYDKV----YKRLDIEF 251

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           ++F  E  ++   P                   +L   K K   K D     + F +  +
Sbjct: 252 ELFNGESFYNEMMPK------------------VLEKLKEKEIAKQDQGALVVFFPNDEL 293

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
              +   + K D S+ Y  +DLA     K E   D  IYV+    S + K++  +A  + 
Sbjct: 294 PPCI---VQKKDNSFLYSTSDLATIVYRKDELNVDIAIYVVDERQSDHFKQVFKIAEMLG 350

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE-------- 416
                        +  + DG     S R GD I L           + +VDE        
Sbjct: 351 SPYNYDKYHTKFGIMRFGDGTI--FSTRGGDVIRLEDILNKAKERVQEIVDEKNPELSQE 408

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ 467
                   VG  ++++  L +  +  + F + KV   +    P  Y+QY+Y R  S+ R+
Sbjct: 409 EREYIAETVGVGAIKYFDLSQNRTSGITFTWDKVLSFEGNTGP--YLQYSYVRIMSMLRK 466

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           AKD+  + +   F  +        D S+  L+V L + P  +  +  +  P  +A Y+Y 
Sbjct: 467 AKDLGIEFENSKFLVD------GSDISDRNLVVSLHKLPTAVIKSYESNRPNLIAEYIYS 520

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   F+  ++        + +  +N +LT  RL L    A +I   L+++G+ + ++M
Sbjct: 521 LTKEFNSFYNAH------QVIDKDNLELTKARLALCEKTALVIKKALSLLGIRTVDKM 572


>gi|304387091|ref|ZP_07369342.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338840|gb|EFM04943.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 572

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 237/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ I   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKIADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A        RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|21221735|ref|NP_627514.1| arginyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|7674350|sp|Q9WX29|SYR_STRCO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5123649|emb|CAB45338.1| putative arginyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 586

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 129/594 (21%), Positives = 235/594 (39%), Gaps = 107/594 (18%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           N  + L++    +P  +A  +VARI   D  ++ V ++G GF+N+ ++   +   L++ +
Sbjct: 44  NGILALAKKTKANPRELAAEVVARITTGDELIEDVEVSGPGFLNITVADRAITANLAARL 103

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
             G   G  L        +++   N    MHVGH R AV+GD L S++ F+G +    ++
Sbjct: 104 ADGERLGVPLKQDAGTTVVDYAQPNVAKEMHVGHLRSAVIGDALRSMLDFTGEKTIGRHH 163

Query: 167 INDAGAQINTLALSVF------------------------WRYQQALYNNDSDLPEGYYP 202
           I D G Q   L   +F                        ++  +A+++ D +  E    
Sbjct: 164 IGDWGTQFGMLIQYLFEHPGELAPAGDIDGEQAMSNLNRVYKASRAVFDTDEEFKERARR 223

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            V    V  +  DK + +L       W   V +  V       + D++   I+ +  + E
Sbjct: 224 RV----VALQSGDKETLDL-------WQQFVDESKVYFYSVFEKLDME---IRDEEIVGE 269

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++ G P   R +++ +       EG L                 + F      DD   
Sbjct: 270 SAYNDGMPETAR-LLEEMG-VAVRSEGALV----------------VFFDEIRGKDDQPV 311

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  K+DG + Y A+DL   + + +      ++YV+    S + + +   A        
Sbjct: 312 PLIVQKADGGFGYAASDLTAIRNRVQDLHATTLLYVVDVRQSLHFRMVFETARRAGWLGD 371

Query: 380 QINVL-LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           ++    +     L  DG P K   RAG+ + L  ++DE                      
Sbjct: 372 EVTAHNMGYGTVLGADGKPFKT--RAGETVRLEDLLDEAVQRAAEVVREKARDLTEDEIQ 429

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A ++
Sbjct: 430 ERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGEV 488

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            P              E     +E  L +HL  +   +  A     P+KLA YLY LAS+
Sbjct: 489 RP----------AAHPELALHEAERALGLHLDAFGPTVFEAAAEYAPHKLAAYLYQLASL 538

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   +       +   ++A   +    RL L    A  ++ G+ ++G+ +P  +
Sbjct: 539 YTTFYD------KCPVLKAETPEQVENRLFLCDLTARTLHRGMALLGIRTPERL 586


>gi|315221535|ref|ZP_07863455.1| arginyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189369|gb|EFU23064.1| arginyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 562

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 242/600 (40%), Gaps = 110/600 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I    KID       +A   ++N +
Sbjct: 26  LLEKPKSSDLGDIAF-PAFSLAKVERKAPQAIATDIAE--KIDSTNFEKVVATGPYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  S +  +++  IV  G  YG+   G G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LDKSKISAQVIKEIVKEGNNYGQQNEGNGENITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D          LK   
Sbjct: 143 NIFRKLGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------ELLKLYV 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +  A+  +   L+     W   ++D   +A  + +  RD+ LK  N  + +   E D   
Sbjct: 195 RINAEIETDPELDDEGRLWFKKLEDGDPEATELWQWFRDESLKEFNRIYKLLGVEFDSLA 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323
           G+      + + I  L  +G + E       SK     ++D             DV+ P 
Sbjct: 255 GEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD-------------DVNLPP 294

Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374
             + KSDG+  Y   D+A   Y    Y   F   IY +G + + + ++L+AV   +    
Sbjct: 295 AMIKKSDGATLYITRDIATAMYRARTY--NFVKNIYAVGQEQANHFRQLKAVLKKMGFDW 352

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S+    ++  L    R        K+S R G+ I L   + E                  
Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKSQIEAKNPDLEN 405

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +V+F  L        DFD    V  + +  P  Y+QYAYAR +SI R+A
Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            D  P  +            S  D    ++I  L ++ RV++ A    +P  +A Y   L
Sbjct: 464 -DFRPSAE---------ATYSLDDAESWEIIKLLQDFARVVKRAADNYDPSLIAKYAISL 513

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+  ++H R   E+P               RL L +A A ++   L ++G+++P +M
Sbjct: 514 AQAFNKFYAHTRILDESPERD-----------SRLALSYATAVVLKESLRLLGIDAPEKM 562


>gi|254670676|emb|CBA06775.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 572

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|325130593|gb|EGC53340.1| arginyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 572

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 125/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ I   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKIADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|56707608|ref|YP_169504.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670079|ref|YP_666636.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456678|ref|ZP_03665151.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370125|ref|ZP_04986131.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874428|ref|ZP_05247138.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81597851|sp|Q5NHI8|SYR_FRATT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123063558|sp|Q14IZ0|SYR_FRAT1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56604100|emb|CAG45099.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320412|emb|CAL08482.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568369|gb|EDN34023.1| hypothetical protein FTBG_01229 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840427|gb|EET18863.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158765|gb|ADA78156.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 581

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 246/594 (41%), Gaps = 101/594 (17%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS 103
           H   N AM L++     PL IAE IV  I  +     + +A  GFIN+ L+P +L    +
Sbjct: 37  HFQCNGAMPLAKFAKKPPLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTN 96

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
             + S  ++G        KV ++F   N   PMHVGH R A++GD L  +  F G  V  
Sbjct: 97  RFLNSN-KFGVQNNLPNRKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVS 155

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------ 217
           + ++ D G Q+  L   +  +  Q +Y +++    G YP      V +ELA+ Y      
Sbjct: 156 DVHLGDWGTQMGMLIEEIKLQSPQLVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKR 212

Query: 218 SSELLNFPEEKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
               +N  E+  L   +             + V+  +  ++ D  +L++  D+++ E D 
Sbjct: 213 CKSDINEMEKARLATFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDA 272

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL- 324
           ++     I ++I       ++YE        +     D ++            D   PL 
Sbjct: 273 NKF----IDEMISYFQANNFIYE-------DEGAWVIDTNK------------DGVPPLI 309

Query: 325 -LKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKA 379
            +K DG   Y   DLA  ++   +   D +IYV+    S + K++ +VA     VSEK  
Sbjct: 310 VIKKDGGVMYGTTDLATLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK-- 367

Query: 380 QINVLLCELVRLY------RDGMPIKMSK-----------RAGDFITLR-------HVVD 415
                 C+L  +       +DG P K  +           +A ++   R        +++
Sbjct: 368 ------CKLKHVAFGTVNGKDGRPFKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIN 421

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ++   +++F  L    +    FD  K  + + K  P  Y+ Y   R +SI R+   IF D
Sbjct: 422 QIAMATIKFGDLINNYANDYFFDLEKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGD 476

Query: 475 -LDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D     ++  V+   +E+   E +L + L ++P  ++ A    +P+ +  Y Y LA+ 
Sbjct: 477 NYDIKSLAKDYKVVNAHNEY---EEKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANS 533

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  + +   N        ++  L   R+ L  A    +    ++IG+  P  M
Sbjct: 534 FNKFYVNCPIN------NLDDESLKKARIALCMATVKAMTIASDLIGISIPERM 581


>gi|189219458|ref|YP_001940099.1| Arginyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186316|gb|ACD83501.1| Arginyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 580

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 142/596 (23%), Positives = 249/596 (41%), Gaps = 86/596 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E   + A G   +N A IL++ L  +P  +AE +   I   P +    + G GF+N  
Sbjct: 28  IVEPCTNPAFGDFQSNIAFILAQSLKANPKNLAEELARSIGESPFIFPPEVGGSGFLNFK 87

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + P +YL   L+  + S    G     +   + I+F S N    +HVGH R  ++GD L 
Sbjct: 88  VKPKAYLDTFLA--IRSDPRLGIEQTKQPQTIVIDFSSPNIAKELHVGHLRSTILGDVLR 145

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            L  F G+ V  + ++ D G Q   + L  + +Y +      +  P  Y   +Y+K + K
Sbjct: 146 KLNLFLGHRVITDNHLGDWGTQFGMVILG-YKKYGRP--ELLTQRPLEYLEELYIK-IQK 201

Query: 212 E------LADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           E      + ++   EL       PE + L    +  VQA +  +    + LN++ D  + 
Sbjct: 202 ESDESTQIREEAKKELQKLQSGDPENRSL---WERFVQASLGELDKIYQRLNVKFDFSLG 258

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           E  ++      +  I++ L ++G     EG +          C       +F      + 
Sbjct: 259 ESFYN----PMLEGIVEQLLQKGIARYSEGAV----------C-------VFFGKSFPEL 297

Query: 320 VDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---- 372
            D PLL  KSDG++ Y   D+A    +++  G   +IYV  S    +  +L A+A     
Sbjct: 298 EDNPLLIRKSDGAFLYATTDIATLFFRFQNWGAHRIIYVTDSRQKLHFNQLFALAQILAL 357

Query: 373 AVSEKKAQINVLLCELVRLY--RDGMPIKMSK-------RAGDFITLR----------HV 413
            V  +      +L E  +    R+G P+K+ +       RA   I  +          H+
Sbjct: 358 PVRLEHVHFGSILGEDKKPLKTREGTPVKLRELLDEAENRAYQLIDAKRKDLSPEKKQHI 417

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAK--D 470
              VG  ++++  L +  +  LD+ F   K  S + N   Y+  A+ R RSI ++A    
Sbjct: 418 ARAVGIGALKYADLSQNRT--LDYVFKWEKLLSFDGNTAPYLINAHVRIRSIMKKASLHG 475

Query: 471 IFPDLDFDLFPRNVIPQESE-FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +  L F       +  E+E     E++L+  L  +   +  A+    P+ L  +LY LA
Sbjct: 476 YYSTLGF-----TSLKFETEALHPQEIELLRTLLSFKYALCLASEENSPHHLCSFLYALA 530

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            VFH  +           + A    +   R+      A  ++ GLN++G+E  +EM
Sbjct: 531 KVFHKFYE------LCPVLGAPTEPIRQRRMAFCECTAQTLSLGLNLLGIEPLDEM 580


>gi|33864335|ref|NP_895895.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|39932085|sp|Q7V493|SYR_PROMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33641115|emb|CAE22244.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 612

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 245/602 (40%), Gaps = 104/602 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    NAA+ L++PL   P  IA  IV ++ +D    ++     IAG GFINL + P  L
Sbjct: 56  GDFQANAALPLAKPLKQPPRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECL 115

Query: 99  RKILSSIVVSG-----IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              + + +        +  G N   + T V ++F S N    MHVGH R  ++GD+LA +
Sbjct: 116 AAEVQARLADARLGVPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARV 175

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212
           + F G+ V R  ++ D G Q   L   +     +AL   D+ DL +     V+ +   + 
Sbjct: 176 LEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLV---VFYRQAKQR 232

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDFHRGD 269
             D  + +  +  E   L      S++A   +    R + + +  + D+ ++E    RG+
Sbjct: 233 FDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNE----RGE 288

Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-- 324
               + +  ++++L   G +                  D  Q +F   + G D  +PL  
Sbjct: 289 SFYNAYLESVVEDLNVSGLLVSD---------------DGAQCVFLEGVTGKD-GKPLPV 332

Query: 325 --LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
              KSDG + Y   DLA  + ++       G   +IYV  +  + +   +  VA  A   
Sbjct: 333 IVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI 392

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
               ++  +   LV+   DG   K+  RAGD + LR ++DE                   
Sbjct: 393 PDAGRLQHVPFGLVQ-GEDGK--KLKTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRD 449

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V++  L +       F F ++    + N   Y+ YA  R   I
Sbjct: 450 EDESFIEQVATTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGI 508

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R+  D+           +V   E +F +T E  L+  L ++  VI        P +L  
Sbjct: 509 ARKGGDL-----------DVTTAELQFSETQEWALVRELLKFDAVIAEVEEELLPNRLCT 557

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L+ VF+  +    + P L+  Q +       RL L    A  +  GL+++G+ +  
Sbjct: 558 YLFELSQVFNRFYD---QVPVLKAEQPSRS----CRLALCRLTADTLKLGLSLLGIPTLE 610

Query: 584 EM 585
            M
Sbjct: 611 RM 612


>gi|302521100|ref|ZP_07273442.1| arginyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302429995|gb|EFL01811.1| arginyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 597

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 133/591 (22%), Positives = 234/591 (39%), Gaps = 84/591 (14%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A  +VA +     +  V ++G GF+N+ +    + + L++
Sbjct: 41  FQANGVLALAKKAKANPRELATQVVAALPDSAVIKDVEVSGPGFLNITVPDEAILRNLAA 100

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+G  V R 
Sbjct: 101 RAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFTGETVIRR 160

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           ++I D G Q   L   +     +   ++DS           + ++ +     Y +    F
Sbjct: 161 HHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEAAMSNLNR----VYKASKALF 216

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIRDIID 278
            E++     KD + + ++ +   D + L   H  F+ E        F + D   IRD  D
Sbjct: 217 DEDEGF---KDRARRRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IRD-AD 270

Query: 279 NLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP--------LL 325
            +   GY              + CD +++  +  RS     +  DDV  P        + 
Sbjct: 271 IVGESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVR 321

Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-V 383
           KS+G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V
Sbjct: 322 KSNGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAV 381

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
            L     L  DG P K   RAG+ + L  ++DE                           
Sbjct: 382 QLAFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERG 439

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A D    
Sbjct: 440 AQVGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSGA- 497

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                 P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++  
Sbjct: 498 ------PAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTT 551

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +              N  ++   RL L       + +GL ++G+ +P  +
Sbjct: 552 FYDQCHV-----LSDDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAPKSL 597


>gi|294056123|ref|YP_003549781.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615456|gb|ADE55611.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 592

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 239/596 (40%), Gaps = 95/596 (15%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK----IDPDVDSVFIAGKGFINL 91
           RP D   G    N  +  ++    +P  + + ++   K     DP++  + +AG GFIN 
Sbjct: 34  RPADPKFGDFQANGVLGFAKRNKANPRDLGQQLIDAAKTSGQFDPELVELSLAGPGFINF 93

Query: 92  YLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P +L + L +    S  + G   + +G KV I++ SAN     H+GH R  V+G+ +
Sbjct: 94  KFTPQFLWQWLQTYSTTSDYQSGARELKQGRKVVIDYPSANTAKQAHIGHLRPMVIGEAI 153

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSV---FWRYQQALYNNDSDLPEGYYPGVYLK 207
           A ++ F G + TR+ ++ D G    TL + +        Q   N  + L + Y  G  L+
Sbjct: 154 ARMLDFCGADTTRDNHVGDWGTNFGTLIMKIKRDGVDLAQLGDNPLAALDQLYKDGSALE 213

Query: 208 HVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
               EL D   +EL+   +      + W  IV D S+ A  K+       + +  DI + 
Sbjct: 214 TEQPELRDVSRNELVLLQDGDATNTQLWQQIV-DISMAAFDKL----FAQMGVHVDIALG 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  F+R     +  I   L+  G   E       S        D  +   R      D +
Sbjct: 269 E-SFYR---DKVERIYTELSDIGLAEE-------SDGALVVWHDEVKKFAR------DNE 311

Query: 322 RP----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVAA 372
           RP    + K DG+  Y + DLA    + E    D ++Y+  +    + ++L    E    
Sbjct: 312 RPYPFNIRKKDGASNYASTDLATILYRVEEFNADEVVYLTDARQQDHFQQLFLTTEKWFK 371

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A       +N +    + L  D  P K   ++G+ I L+ ++DE    +  F ++  KN 
Sbjct: 372 AKQYPLPTMNHVWWGTI-LGEDKKPFKT--KSGESIKLQELLDEARERA--FAVVTEKNG 426

Query: 433 ELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464
           EL +                +  +     ++ VF              Y+ YA AR  SI
Sbjct: 427 ELPEDERREIANAVGIGALKYSDLSSNRTQDYVFNWDRMLSFEGNTAPYLLYAVARINSI 486

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           FR+A         ++ P   I   S  +T +EL L   L      +E       P+ L  
Sbjct: 487 FRKA---------EMNPDAAISGASPLETDAELALARKLMGLVNALELTLNDLRPHFLCT 537

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           YLY+LA  +   ++  +       V  + + +   RL L     +++ +GL ++G+
Sbjct: 538 YLYELAGAYSSFYNANK-------VMVDEQDIRARRLLLCARTRTVLITGLKLLGI 586


>gi|302559209|ref|ZP_07311551.1| arginyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302476827|gb|EFL39920.1| arginyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 585

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 135/628 (21%), Positives = 243/628 (38%), Gaps = 119/628 (18%)

Query: 24  VEKKILDRIVIERP---------RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           V++++   +   RP         R         N  + L++    +P  +A  +VA +  
Sbjct: 11  VQQQLASALTATRPEAAGADPLLRRSDRADFQANGILALAKKAKANPRELAAEVVAHLTT 70

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              +  V ++G GF+NL ++   +   L++    G   G  L        +++   N   
Sbjct: 71  GDLIKDVEVSGPGFLNLTIADRAITANLAARHADGERLGVPLKENAGVTVVDYAQPNVAK 130

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF------------ 182
            MHVGH R AV+GD L  ++ F+G +    ++I D G Q   L   +F            
Sbjct: 131 EMHVGHLRSAVIGDALRGMLDFTGEKTIGRHHIGDWGTQFGMLIQYLFEHPGELAPAADV 190

Query: 183 ------------WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                       ++  + L+++D +  E     V    V  +  DK + EL       W 
Sbjct: 191 DGEQAMSNLNRVYKASRVLFDSDEEFKERARKRV----VALQSGDKETLEL-------WQ 239

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V +  V       + D++   I+ +  + E  ++ G P   R +++ +       EG 
Sbjct: 240 QFVDESKVYFYSVFEKLDME---IRDEEIVGESAYNEGMPETAR-LLEEMG-VAVRSEGA 294

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER- 347
           L                 + F      DD   PL+  K+DG + Y A+DL   + + +  
Sbjct: 295 LV----------------VFFDEIRGKDDQPVPLIVQKADGGFGYAASDLTAIRDRVQDL 338

Query: 348 GFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
               ++YV+    S H   V      A  +++     N+    +  L  DG P K   R 
Sbjct: 339 HATTLLYVVDVRQSLHFRMVFETARRAGWLNDDVTAHNMGYGTV--LGADGKPFKT--RE 394

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G+ + L  ++DE                           VG  +V++  L    S    F
Sbjct: 395 GETVRLEDLLDEAVQRAAEVVREKARDLTDDEIRERAAQVGIGAVKYADLSTSPSRDYKF 454

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D  ++   + +  V Y+QYAYAR +SI R+A ++ P              E E   +E  
Sbjct: 455 DLDQMVSLNGDTSV-YLQYAYARIQSILRKAGEVRP----------AAHPELELHEAERA 503

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L +HL  +   +  A     P+KLA YLY LAS++   +       +   ++A++ +   
Sbjct: 504 LGLHLDAFGDTVFEAAAEYAPHKLAAYLYQLASLYTSFYD------KCPVLKADSPEQVE 557

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L    A  ++ G+ ++G+ +P  +
Sbjct: 558 NRLFLCDLTARTLHRGMALLGIRTPERL 585


>gi|318057995|ref|ZP_07976718.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318077002|ref|ZP_07984334.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 597

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 133/591 (22%), Positives = 234/591 (39%), Gaps = 84/591 (14%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A  +VA +     +  V ++G GF+N+ +    + + L++
Sbjct: 41  FQANGVLALAKKAKANPRELATQVVAALPDSTVIKDVEVSGPGFLNITVPDEAILRNLAA 100

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+G  V R 
Sbjct: 101 RAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFTGETVIRR 160

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           ++I D G Q   L   +     +   ++DS           + ++ +     Y +    F
Sbjct: 161 HHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEAAMSNLNR----VYKASKALF 216

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIRDIID 278
            E++     KD + + ++ +   D + L   H  F+ E        F + D   IRD  D
Sbjct: 217 DEDEGF---KDRARRRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IRD-AD 270

Query: 279 NLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP--------LL 325
            +   GY              + CD +++  +  RS     +  DDV  P        + 
Sbjct: 271 IVGESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVR 321

Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-V 383
           KS+G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V
Sbjct: 322 KSNGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAV 381

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
            L     L  DG P K   RAG+ + L  ++DE                           
Sbjct: 382 QLAFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERG 439

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A D    
Sbjct: 440 AQVGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSGA- 497

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                 P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++  
Sbjct: 498 ------PAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTT 551

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +              N  ++   RL L       + +GL ++G+ +P  +
Sbjct: 552 FYDQCHV-----LSDDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAPKSL 597


>gi|255532212|ref|YP_003092584.1| arginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345196|gb|ACU04522.1| arginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 593

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 234/568 (41%), Gaps = 123/568 (21%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ +Y   + ++ ++        +   G KV +E+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLSIADAYWLNLFNTSLLD--PSFAAIKPNGKKVMVEYSSPNTNKPLHLGHVRNNL 138

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-------QQALYNNDSDLPE 198
           +G ++A L+   GYEV +   +ND G  I    L+  W+        + AL   D  +  
Sbjct: 139 LGYSVAELLKADGYEVIKVNLVNDRGIHICKSMLA--WQKWGNGETPESALLKGDHLV-- 194

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           G Y  ++ K   KE+             +K  P++K+   Q M+                
Sbjct: 195 GKYYVIFDKEYKKEIDTLKLEGQTEEEAKKNAPLIKE--AQKMLL--------------- 237

Query: 259 FISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDR----------- 306
                D+  G P    ++ID   +  G+VY G      S      D D+           
Sbjct: 238 -----DWEAGVP----EVIDLWKKMNGWVYAGF---DVSYKNLGVDFDKYYYESNTYLLG 285

Query: 307 ---------KQLLFRS-------TMVGDDVDRPL-LKSDGSYTYFAADLAYFKCKYER-G 348
                    K + F+         +  D +D+ L L++DG+  Y   DL   + KY+   
Sbjct: 286 KDTVDEGLEKGIFFKKPDGSVWIDLTEDGLDQKLVLRADGTSVYITQDLGTAQMKYDDFK 345

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IYV+G++   + K L  +   + +  A+ ++ L   +V L       KM  R G  
Sbjct: 346 MDESIYVVGNEQDYHFKVLFLILEKLGKSWAKGLHHLSYGMVDLPSG----KMKSREGTV 401

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           +    +V E                             +G  ++++ +L  +  + L FD
Sbjct: 402 VDADDLVAEMIETARAKTEILGKVNDFEEKEKKELFYNIGLGALKYFLLKVEPKKRLLFD 461

Query: 439 FCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             + +  Q    P  ++QY +AR +S+  +A       D+D   + V   ++    +EL+
Sbjct: 462 PSESIDFQGNTGP--FIQYTHARIKSLLSKA-------DYDFSAKGV--SDASITGTELE 510

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           +I+ LA+YP  I +A  A  P  LA YLY++A +F+  +    E P +  ++  N  + +
Sbjct: 511 MIMLLAKYPAEIASAAKAYSPATLANYLYEVAKLFNKFY---HETPPI--IKEENETVKL 565

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L    A ++  G+ I+G+  P  M
Sbjct: 566 YRLNLSFVTADVLKRGMRILGITVPERM 593


>gi|300813674|ref|ZP_07093996.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512216|gb|EFK39394.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 569

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 140/604 (23%), Positives = 254/604 (42%), Gaps = 112/604 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG----KGF 88
           ++E P D   G  +      L++    +P  IAE +  +I      +S + A       +
Sbjct: 27  MVEIPPDYKMGDFAF-PVFSLAKIYRKNPAIIAEELAKKI------ESKYFAKIENKSAY 79

Query: 89  INLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N ++    L  ++L   +     +G++ IG+G  V +E+ S N   P H+GH R  V+G
Sbjct: 80  LNFFIDKDILAEEVLKETIDKKENFGKSTIGRGKNVCVEYSSTNIAKPFHIGHIRSTVIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSD-LPEGYYPGVY 205
           D++  +  F GY      ++ D G Q   L  +   W  ++ +  N  D L + Y     
Sbjct: 140 DSIKRIYQFLGYNTIAINHLGDYGTQFGMLIYAYKKWGDKKKIEENPIDELLKLYVKVNT 199

Query: 206 LKHVGKELADK---YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           L    KE+ ++   +  EL N   E     KW    K+ S++   ++     K L+I+ D
Sbjct: 200 LAEEDKEVKEECRYWFKELENQNPEAVEIWKWF---KEVSLKEFNRV----YKMLDIEFD 252

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E  +    P+ I D+     R   + E      +S+  +  ++             
Sbjct: 253 SYNGESFYSDKMPALIEDL-----RNRNILE------ESQGAEVINL------------- 288

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVA- 371
           D+ D P   ++KSDG+  Y   DLA  K ++E  + F + IYV+GS  S + K+L+A   
Sbjct: 289 DEYDLPPAIVVKSDGTTIYLTRDLAAAKYRHENYKPFRS-IYVVGSQQSLHFKQLKAALK 347

Query: 372 ----------------------AAVSEKKAQINVL------LCELVRLYRDGMPIKMSKR 403
                                   +S +K ++  L        E VR   D    K S++
Sbjct: 348 KAGFDWYDEIIHVAFGMVSLEDGTLSTRKGKVVYLEDVLNRAIEKVREILDQREEKTSRK 407

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCR 462
             +   L  +   VG  +++F  L+  N  + D+ F   K  S E     YVQY +AR  
Sbjct: 408 IENKEELAEI---VGIGAIKFQELF--NQRIKDYVFNWDKTLSFEGESGPYVQYVHARIS 462

Query: 463 SIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+  + +  +    DF L               E+ ++ +L  +  V+ +A    EPY +
Sbjct: 463 SLLEKGEFSLDKKFDFSLLQ----------GQEEVDILRNLYNFTDVVIDAHNKFEPYII 512

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             Y+ +LA  F+  ++        R +  ++      RL L ++V ++I  GL+++G+++
Sbjct: 513 TRYIVELAKNFNKFYTQ-------RPILVDDELTKNTRLLLCYSVKNVIREGLDLLGIKA 565

Query: 582 PNEM 585
           P +M
Sbjct: 566 PEKM 569


>gi|225375605|ref|ZP_03752826.1| hypothetical protein ROSEINA2194_01230 [Roseburia inulinivorans DSM
           16841]
 gi|225212584|gb|EEG94938.1| hypothetical protein ROSEINA2194_01230 [Roseburia inulinivorans DSM
           16841]
          Length = 595

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 133/600 (22%), Positives = 239/600 (39%), Gaps = 87/600 (14%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  IA+ +V ++  +P          GF+NL +  
Sbjct: 33  RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVVEKLAANPIFAMAESVKPGFLNLKIDE 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +YL   ++ +      +G         + I++   N   P+HVGH R A++G+++  +  
Sbjct: 90  AYLADYVAKMQEDEGRFGCEKTEAPKTIMIDYGGPNVAKPLHVGHLRSAIIGESVKRIGK 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---- 211
           F G+ V  + ++ D G Q+  +   +  R  + +Y +D+    G YP      + +    
Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELKLRRPELVYFDDAHT--GEYPEEAPFTISELEEI 207

Query: 212 -ELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD----DLK----ALNIQHDI 258
              A K S E   + E       +        QA++K I +    DLK     LN+  ++
Sbjct: 208 YPTASKKSKEDEAYKEAAMQATFELQHGKRGYQALLKHILNVSVTDLKRNYANLNVSFEL 267

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +  E D     P    D++  +   G+ Y  +G L         K D D K++     M+
Sbjct: 268 WKGESDAQPYIP----DMVQKMKDDGFAYISDGALV-----VDVKEDTDTKEI--PPCMI 316

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                   LKSDG+  Y   DLA    +  +   D +IYV+      Y  ++   A    
Sbjct: 317 --------LKSDGASLYNTTDLATMVWRMKDYNPDEIIYVVDKRQELYFTQVFRCARKTG 368

Query: 376 EKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             K +  +       +  +DG P K   R G  + L H++  +  + +  +   +K  E 
Sbjct: 369 IVKPETELKFLGFGTMNGKDGRPFKT--RDGGVMRLEHLISGINEEMLAKIQENQKTKEN 426

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLD-FDLFPRNVIPQ----- 487
           L      +  +  EN    V  A  +   +  QA KD   D+D F  F  N  P      
Sbjct: 427 LG-----ISTEEAENTAKMVALAAIKYGDLSNQASKDYIFDIDRFTSFEGNTGPYILYTI 481

Query: 488 ----------------------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                                 ES    SE  L++ L+++  V+E+A     P+K+  Y+
Sbjct: 482 VRIKSILNKYHGLGKDDSGAVIESAHSKSEKDLMLELSKFNAVMESAFEETAPHKICSYI 541

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDLA+ F+  + HG      + +   N  +    ++L+    S++ + ++++G  +P  M
Sbjct: 542 YDLANAFNSFY-HG-----TKIMSEENETVQKSYIRLLELTKSVLETCIDVLGFSAPERM 595


>gi|295837204|ref|ZP_06824137.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197698558|gb|EDY45491.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 597

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 134/595 (22%), Positives = 234/595 (39%), Gaps = 92/595 (15%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A+ +VA +     +  + ++G GF+N+ +    + + L++
Sbjct: 41  FQANGVLALAKKAKANPRELADRVVAGLPDSAVIKEIEVSGPGFLNITVPDEAILRNLAA 100

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+G  V R 
Sbjct: 101 RSAAGERLGVPYAEHPGRTVIDYAQPNVAKQMHVGHLRSAVIGDAVMRMLEFTGETVIRR 160

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----ELADKYSSE 220
           ++I D G Q   L         Q L  + ++L     P    +  G+     L   Y + 
Sbjct: 161 HHIGDWGTQFGMLI--------QYLVEHPAELDRSADPAEASQEAGEAAMSNLDRVYKAS 212

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIR 274
              F E++     KD +   ++ +   D + L   H  F+ E        F + D   IR
Sbjct: 213 KKLFDEDEGF---KDRARHRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IR 267

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP------ 323
           D  D +   GY              + CD +++  +  RS     +  DDV  P      
Sbjct: 268 D-ADIVGESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGRPVP 317

Query: 324 --LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             + KS+G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         
Sbjct: 318 LIVRKSNGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLTED 377

Query: 381 IN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +  V L     L  DG P K   RAG+ + L  ++DE                       
Sbjct: 378 VRAVQLAFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDVKGQLGEDEI 435

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A  
Sbjct: 436 AERGAQVGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATA 494

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                     P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS
Sbjct: 495 SGA-------PAPAAHTELPLAPAERALGLHLDAFGDQVLEATGEYAPHKLAAYLYQTAS 547

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++   +              N  ++   RL L       + +GL ++G+ +P  +
Sbjct: 548 LYTTFYDQCHV-----LSDDNAPEVVANRLFLCELTGRTLAAGLGLLGIRAPKSL 597


>gi|160879423|ref|YP_001558391.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160428089|gb|ABX41652.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 594

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 244/602 (40%), Gaps = 92/602 (15%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N A+  ++     P+ IA  IV   K +P +  +     GFIN  +  
Sbjct: 33  RPDLCQY---QCNGALAAAKQYKKAPIMIANEIVEHCKDNPVLKEITAIMPGFINFSVKE 89

Query: 96  SYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            +L   L S+ V    G E  +N       + +++   N   P+HVGH R A++G+++  
Sbjct: 90  EFLVDYLQSMSVDERLGCEEAKN----PDTIVVDYGGPNVAKPLHVGHLRPAIIGESIKR 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211
           ++ F G+ V  + ++ D G Q+  +   V  R     Y ++S    G YP      + + 
Sbjct: 146 MIRFLGHNVIGDAHLGDWGTQMGLIIAEVRKRQPNLSYFDESYT--GEYPSEAPFTISEL 203

Query: 212 ----ELADKYSSELLNFPEEKWLPIV------KDYSV--QAMMKIIRDDLKA----LNIQ 255
                 A +YS E   F EE    +       + Y+     +M +  +DLK     LN+ 
Sbjct: 204 EEIYPTASEYSKEHPEFREEAKEVVFELQNGHRGYTALWNHIMTVSMNDLKKNYDNLNVH 263

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            D++  E D     P     ++  L   GY  + EG L         K + D K+L    
Sbjct: 264 FDVWKKESDAQPYIPG----MVTYLKENGYAKISEGALV-----VDVKEETDTKEL--PP 312

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAA 372
            M+        LKSDG+  Y   DLA    + E     ++IYV+      +    E V  
Sbjct: 313 CMI--------LKSDGASLYATTDLATLVERMELFMPASVIYVVDKRQELH---FELVFR 361

Query: 373 AVSEKK---AQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-- 426
            V + K     +N+       +  +DG P K   R G  + L H++D +  +  + +M  
Sbjct: 362 CVKKTKLVPKDVNLTFLGFGTMNGKDGKPFKT--RDGGVMRLEHLMDSINEEVYKKIMSN 419

Query: 427 ---------LWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463
                       K   L    +  +  Q+ ++ +F              Y+ Y   R +S
Sbjct: 420 REMEEEEAREIAKIVGLAALKYGDLSNQASKDYIFDIDRFTSFEGNTGPYILYTIVRIKS 479

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I  + ++    +D             E+  SE+ L++  A++  +IE+A     P+KL  
Sbjct: 480 ILAKYQEENKAVDVSKLCIKS-GNTREYGISEVNLMLECAKFNDMIEHAAYENAPHKLCA 538

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+YDLA+ F   +    EN   + +   N++     + L+  V  I+++ + ++G  +P 
Sbjct: 539 YVYDLANAFSTFY---HEN---KIIAEENKEKQQEWIALIKLVLRILSTCIELLGFSAPE 592

Query: 584 EM 585
           +M
Sbjct: 593 KM 594


>gi|113461098|ref|YP_719166.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123132089|sp|Q0I3B0|SYR_HAES1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112823141|gb|ABI25230.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 577

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 133/595 (22%), Positives = 240/595 (40%), Gaps = 106/595 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  I +    + + IAG GFIN++L  ++L + +
Sbjct: 37  GDYQANGIMATAKKLGLNPRDFAQKVLDLIDLKNIAEKMEIAGPGFINIFLDKNWLAENI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             + +   + G  +    T V +++ S N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 97  Q-VTLQDKKLGVTVEEIQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ND    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASAMELADLEAFYRAAKEHYDNDETFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D Y   +       W  +V D ++Q   +   D L     Q+D+ + E  
Sbjct: 215 ----VKLQNGDAYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTQNDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P    +I+ +L  QG   E        +  Q   ++     F++   GD +   +
Sbjct: 261 YNPMLP----EIVADLKAQGLAVE-------DEGAQVVYLEE----FKNK-DGDPMGVIV 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-N 382
            K DG + Y   D+A  K +Y     D  +    +  S ++++    A  ++ K   + +
Sbjct: 305 QKKDGGFLYTTTDIAAAKYRYHTLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPD 360

Query: 383 VLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               E     + L +DG P K   R+G  + L  ++DE                      
Sbjct: 361 SFQLEHKNFGMMLGKDGKPFKT--RSGGTVKLTDLLDEAIERADKLISEKSTALSSKEKA 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGSVKYADLSKNRTTDYVFDW-DIMLSFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                 D+    + P + +  D  E  L + L ++   ++       P+ L  YLY+LA 
Sbjct: 475 ------DISEEQLHPAKIQLTDEKERLLAIKLLQFEETVQIVGKEGTPHILCAYLYELAG 528

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F   + H         +  +N  + + RL+L       +  GL+++G+++  +M
Sbjct: 529 LFSSFYEH------CPILNNDNENVKLSRLKLALLTEKTLKQGLDLLGIKTVEKM 577


>gi|261392246|emb|CAX49766.1| arginyl-tRNA synthetase (arginine--tRNA ligase; ArgRS) [Neisseria
           meningitidis 8013]
          Length = 572

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHA-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|328353614|emb|CCA40012.1| arginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 642

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 155/627 (24%), Positives = 259/627 (41%), Gaps = 104/627 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+NY+ +   KI    K L    +E       G L      +  R  G +P  +AE   A
Sbjct: 68  LRNYITQELSKISGVDKELIFPALEWGTTLEKGDLLIPVPRL--RIKGANPKDLAEQWAA 125

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
                  +  V IA   F+  + + S L K ++S  +  G ++G   +GKG KV +EF S
Sbjct: 126 AFPKGGYLKDV-IAQGPFLQFFFNTSVLYKLVISDALERGDDFGALPLGKGQKVIVEFSS 184

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-QQA 188
            N   P H GH R  ++G  +++L    G+EV R  Y+ D G Q   LA+  F RY  +A
Sbjct: 185 PNIAKPFHAGHLRSTIIGGFISNLYEKLGHEVMRMNYLGDWGKQFGVLAVG-FERYGDEA 243

Query: 189 LYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSS--ELLNFPEEKWLP 231
               D   P  +   VY+K                 G+ L D+  +  + +   +E  + 
Sbjct: 244 KLKTD---PINHLFEVYVKINQDIKAQSESTEEIAEGQSLDDQARAFFKKMENGDESAVS 300

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + K +   ++ K I D    LNI++D++        G+    ++I+D  A + +  +G+L
Sbjct: 301 LWKRFRELSIEKYI-DTYARLNIKYDLY-------SGESQVPQEIMDE-ATKIFEEKGLL 351

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GF 349
                        D+   L   T     + + ++ K DG+  Y   D+     +Y +  F
Sbjct: 352 SE-----------DQGAKLIDLTKFNKKLGKAIVQKKDGTSLYLTRDVGAAIDRYRKYKF 400

Query: 350 DNMIYVMGSDHSGY-------VKRLE------------AVAAAVSEKKAQINVLLCELVR 390
           D MIYV+ S    +       +KR++             +   +S +K  + V L  ++ 
Sbjct: 401 DKMIYVIASQQDLHTAQFFEILKRMDFEWAKNLTHINFGMVLGMSSRKGTV-VFLDTILE 459

Query: 391 LYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QS 446
             ++ M   M K    +  +     V D VG  +V    +  K     +F + ++   + 
Sbjct: 460 ETKEKMHDVMRKNDSKYQQIANPEEVADLVGISAVMIQDMQSKRINNYEFKWERMTSFEG 519

Query: 447 KENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              P  Y+QYA++R  SI R A DI     P  DF L    V PQ +E+      L+  L
Sbjct: 520 DTGP--YLQYAHSRLASITRNA-DIDLAELPGADFGLL---VEPQ-AEY------LVRLL 566

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           A+YP V+  +    EP  L  YL+ L    +S +   W  G+E P           L   
Sbjct: 567 AQYPDVLRTSLKNHEPSTLVTYLFKLTHQVSSCYDVLWVAGQEKP-----------LATA 615

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  +   ++ +G+ ++G+     M
Sbjct: 616 RLALYASARQVLYNGMLLLGLTPVERM 642


>gi|170717675|ref|YP_001784750.1| arginyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083536|sp|B0UUF1|SYR_HAES2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|168825804|gb|ACA31175.1| arginyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 577

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 133/595 (22%), Positives = 240/595 (40%), Gaps = 106/595 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  I +    + + IAG GFIN++L  ++L + +
Sbjct: 37  GDYQANGIMATAKKLGLNPRDFAQKVLDLIDLKNIAEKMEIAGPGFINIFLDKNWLAENI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             + +   + G  +    T V +++ S N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 97  Q-VTLQDKKLGVTVEEIQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ND    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASAMELADLEAFYRAAKEHYDNDETFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D Y   +       W  +V D ++Q   +   D L     Q+D+ + E  
Sbjct: 215 ----VKLQNGDAYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTQNDV-MGESL 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++   P    +I+ +L  QG   E        +  Q   ++     F++   GD +   +
Sbjct: 261 YNPMLP----EIVADLKAQGLAVE-------DEGAQVVYLEE----FKNK-DGDPMGVIV 304

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-N 382
            K DG + Y   D+A  K +Y     D  +    +  S ++++    A  ++ K   + +
Sbjct: 305 QKKDGGFLYTTTDIAAAKYRYHTLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPD 360

Query: 383 VLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               E     + L +DG P K   R+G  + L  ++DE                      
Sbjct: 361 SFQLEHKNFGMMLGKDGKPFKT--RSGGTVKLTDLLDEAIERADKLISEKSTALSSKEKA 418

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +    
Sbjct: 419 AVIEAVGIGSVKYADLSKNRTTDYVFDW-DIMLSFEGNTAPYMQYAYTRIRSIFNKT--- 474

Query: 472 FPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                 D+    + P + +  D  E  L + L ++   ++       P+ L  YLY+LA 
Sbjct: 475 ------DISEEQLHPAKIQLTDEKERLLAIKLLQFEETVQIVGKEGTPHILCAYLYELAG 528

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F   + H         +  +N  + + RL+L       +  GL+++G+++  +M
Sbjct: 529 LFSSFYEH------CPILNNDNENVKLSRLKLALLTEKTLKQGLDLLGIKTVEKM 577


>gi|197284974|ref|YP_002150846.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693143|sp|B4ETN5|SYR_PROMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194682461|emb|CAR42387.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 576

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 138/601 (22%), Positives = 235/601 (39%), Gaps = 119/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +G+ P  +AE I+  + I    D V IAG GFIN++LSP ++ +  
Sbjct: 37  GDYQANGVMGAAKKMGIPPRQLAEKILEHLDITDIADKVEIAGPGFINIFLSPVWVAQ-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +   ++        +   T V I++ S N    MHVGH R  ++GD  A  ++F G+ V 
Sbjct: 96  AEFALADEHLNITKVTPETIV-IDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVI 154

Query: 163 REYYI------------------NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++                  N+  A +    L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHLGDWGTQFGMLIAYLEKKQNENAADMALADLEEFYREAKKCYDEDEVFAERARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G    D+Y   +       W  +V     Q  +   R     LN+     ++EDD
Sbjct: 215 VRLQGG----DEYCRTM-------WRKLVDITMQQNQLTYQR-----LNVT----LTEDD 254

Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              G+   +P +  I+ +L  +G   E      +  T    D  + +        G+ + 
Sbjct: 255 I-MGESLYNPMLPGIVADLKAKGLAVES-----EGATVVFLDEYKNK-------EGEPMG 301

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHS------GYVKRLEAVAAA 373
             + K DG Y Y   D+A  K ++E+   N +  Y+    H         V++   +  +
Sbjct: 302 VIIQKKDGGYLYTTTDIACAKYRHEQLHANRVLYYIDSRQHQHLMQAWTIVRKAGYIPDS 361

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
           +S +     ++L       +DG P K   R+G  + L  ++DE                 
Sbjct: 362 MSLEHHMFGMMLG------KDGRPFK--TRSGGTVRLTDLLDEAHERALTLIREKNPDMD 413

Query: 417 ----------VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                     VG  +V++  L +  +   + D+D     E    N   Y+QYAY R  SI
Sbjct: 414 EEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYMQYAYTRVASI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F++A     D+D     + +    S     E QL + L ++   I        P+ +  Y
Sbjct: 471 FKRA-----DIDESALTQPI----SLTQPHEKQLALRLVQFDETITQVAREGTPHVMCAY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LYDLA  F G + +         + A +  +   RL+L    A  +  GL  +G+E+ + 
Sbjct: 522 LYDLAQSFSGFYEN------CPILSAEDDNVRQSRLKLARLTARTLKQGLETLGIETVDR 575

Query: 585 M 585
           M
Sbjct: 576 M 576


>gi|295108490|emb|CBL22443.1| arginyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 588

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 127/601 (21%), Positives = 253/601 (42%), Gaps = 90/601 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF-IAGKGFINL 91
           V  RP  C +     N AM  ++     P  IA+ +VA +K D ++ SV  +   GFINL
Sbjct: 30  VSNRPDLCEY---QCNGAMAGAKAYKKAPFMIADDVVAFLK-DSNIFSVAEVVKPGFINL 85

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +   +L + L  +     +Y  N   +   + I++   N   P+HVGH R A++G+++ 
Sbjct: 86  RVKEEFLAEYLCKMAADP-KYSVNTAEQPKTIIIDYGGPNVAKPLHVGHLRSAIIGESIK 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP--------- 202
            +  F G++V  + ++ D G Q+  +   +  R  + +Y +DS   EG YP         
Sbjct: 145 RIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDS--FEGEYPEEAPFTISE 202

Query: 203 --GVYLKHVGKELAD-KYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254
              +Y    GK   D +Y +E L    +     +    + ++ +Q  +  ++ +   LN+
Sbjct: 203 LEEIYPCASGKSKVDEEYRNEALEATHQLQQGKRGYMALWNHIMQVSVTDLKRNYNNLNV 262

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D++  E D     P    D++  +  QG+ YE                D+  L+    
Sbjct: 263 SFDLWKKESDAQPYIP----DMVQQMKDQGFAYE----------------DQGALVVDVK 302

Query: 315 MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
              D  + P   LLKSDG+  Y   DLA    + +    D ++YV+      +  ++   
Sbjct: 303 EESDTKEIPPCMLLKSDGASLYTTTDLATIVERVKLFDPDEILYVVDKRQELHFIQVFRC 362

Query: 371 AAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           A      K +  +       +  +DG P K   R G  + L +++ ++  +    ++  R
Sbjct: 363 ARKTGLVKPETELSFLGFGTMNGKDGKPFKT--RDGGVMRLENLIADIDEEMFHKIVENR 420

Query: 430 --------KNSELLDFDFCK---VKEQSKENPVF--------------YVQYAYARCRSI 464
                   + +E++     K   +  Q+ ++ VF              Y+ Y   R +SI
Sbjct: 421 SVKDQDAKETAEIVGLSAIKYGDLSNQATKDYVFDIDRFTSFEGNTGPYILYTIVRIKSI 480

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             + K+   +LD       ++P     + S+  L++ L ++   IENA   + P+K+  Y
Sbjct: 481 LNRYKEEGGNLD----AGEILPA---VNASQKNLMLELTKFGSTIENAFEEKAPHKICAY 533

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +Y++++ F+  +         + +   ++      L+L+     I+ + ++++G  +P+ 
Sbjct: 534 IYEVSNAFNSFYHE------TKILSEEDQAQKESFLKLLGLTKDILETSIDLLGFSAPDR 587

Query: 585 M 585
           M
Sbjct: 588 M 588


>gi|88858297|ref|ZP_01132939.1| arginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819914|gb|EAR29727.1| arginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 580

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 239/583 (40%), Gaps = 79/583 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ L  +P  +A+ I+  + +D     + IAG GFIN++L P +L   L
Sbjct: 37  GDYQINGAMGAAKKLKANPRELAQKIIDHLDLDDVAAQLEIAGPGFINIHLKPEFLAAQL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +      + G  +  K  KV +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 97  VA-ANQDEKLGVQVHAKAQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVV 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL 221
           R+ ++ D G Q   L                + L +    G+ L+ V   +L   Y    
Sbjct: 156 RQNHMGDWGTQFGMLI---------------AHLEDLLNQGIDLEAVALADLESFYRDSK 200

Query: 222 LNF-PEEKWLPIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             F  EE +    +DY V+        + L  L I   +  S + +H+ + +  +D  D 
Sbjct: 201 KRFDDEEGFADKARDYVVKLQSGDAHCEKLWRLFINTSVKHSSEVYHKLNVTLTQD--DI 258

Query: 280 LARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334
           +A   Y  E   I+   K+K     +    Q++F   +    G+     + KS G + Y 
Sbjct: 259 MAESAYNSELHNIIALLKAKNI-AVESQGAQVVFLEELANKEGEPSAFIVQKSGGGFLYA 317

Query: 335 AADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390
             DLA   C Y       D ++  + +  S +  ++E  A      + + +   C     
Sbjct: 318 TTDLA--ACDYRSNKLQADRILIFVDARQSLHFSQVELTARKAGLLRDETSYEFCPFGTM 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           +  DG P K   R+GD + L  +++E                           VG  +V+
Sbjct: 376 MGEDGKPFKT--RSGDTVKLADLLEEAITRAQAKLAERESDLSEQERAEIARKVGIGAVK 433

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           +  L +  +   D+ F      S E     Y+QYAY R RS+FR+A     ++D      
Sbjct: 434 YADLSKNRTS--DYIFNWDSMLSFEGATAPYLQYAYMRVRSLFRKA-----NIDVSTLNA 486

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            +   E +     L+L+       ++I  AT    P+ L  YLY+LAS++   +      
Sbjct: 487 AITIAEPQEKALALKLLQLEEVLDQMINEAT----PHVLCAYLYELASLYMTFY---EAC 539

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L+     + +L   RL L + VA+ +  GL ++G+E   +M
Sbjct: 540 PVLK--DDISTQLRDSRLVLCNLVANTLQQGLGLLGIEVMEQM 580


>gi|254570523|ref|XP_002492371.1| Arginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238032169|emb|CAY70124.1| Arginyl-tRNA synthetase [Pichia pastoris GS115]
          Length = 657

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 155/627 (24%), Positives = 259/627 (41%), Gaps = 104/627 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+NY+ +   KI    K L    +E       G L      +  R  G +P  +AE   A
Sbjct: 83  LRNYITQELSKISGVDKELIFPALEWGTTLEKGDLLIPVPRL--RIKGANPKDLAEQWAA 140

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
                  +  V IA   F+  + + S L K ++S  +  G ++G   +GKG KV +EF S
Sbjct: 141 AFPKGGYLKDV-IAQGPFLQFFFNTSVLYKLVISDALERGDDFGALPLGKGQKVIVEFSS 199

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-QQA 188
            N   P H GH R  ++G  +++L    G+EV R  Y+ D G Q   LA+  F RY  +A
Sbjct: 200 PNIAKPFHAGHLRSTIIGGFISNLYEKLGHEVMRMNYLGDWGKQFGVLAVG-FERYGDEA 258

Query: 189 LYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSS--ELLNFPEEKWLP 231
               D   P  +   VY+K                 G+ L D+  +  + +   +E  + 
Sbjct: 259 KLKTD---PINHLFEVYVKINQDIKAQSESTEEIAEGQSLDDQARAFFKKMENGDESAVS 315

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + K +   ++ K I D    LNI++D++        G+    ++I+D  A + +  +G+L
Sbjct: 316 LWKRFRELSIEKYI-DTYARLNIKYDLY-------SGESQVPQEIMDE-ATKIFEEKGLL 366

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GF 349
                        D+   L   T     + + ++ K DG+  Y   D+     +Y +  F
Sbjct: 367 SE-----------DQGAKLIDLTKFNKKLGKAIVQKKDGTSLYLTRDVGAAIDRYRKYKF 415

Query: 350 DNMIYVMGSDHSGY-------VKRLE------------AVAAAVSEKKAQINVLLCELVR 390
           D MIYV+ S    +       +KR++             +   +S +K  + V L  ++ 
Sbjct: 416 DKMIYVIASQQDLHTAQFFEILKRMDFEWAKNLTHINFGMVLGMSSRKGTV-VFLDTILE 474

Query: 391 LYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QS 446
             ++ M   M K    +  +     V D VG  +V    +  K     +F + ++   + 
Sbjct: 475 ETKEKMHDVMRKNDSKYQQIANPEEVADLVGISAVMIQDMQSKRINNYEFKWERMTSFEG 534

Query: 447 KENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              P  Y+QYA++R  SI R A DI     P  DF L    V PQ +E+      L+  L
Sbjct: 535 DTGP--YLQYAHSRLASITRNA-DIDLAELPGADFGLL---VEPQ-AEY------LVRLL 581

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           A+YP V+  +    EP  L  YL+ L    +S +   W  G+E P           L   
Sbjct: 582 AQYPDVLRTSLKNHEPSTLVTYLFKLTHQVSSCYDVLWVAGQEKP-----------LATA 630

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  +   ++ +G+ ++G+     M
Sbjct: 631 RLALYASARQVLYNGMLLLGLTPVERM 657


>gi|257076127|ref|ZP_05570488.1| arginyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 542

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 228/538 (42%), Gaps = 115/538 (21%)

Query: 66  ELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR--NLIGKG 120
           E + +RIK   D   +D V + G  +IN Y+  S   K+L ++  S   +G+  N     
Sbjct: 47  EEVYSRIKSSMDMEFIDRVELQG-NYINFYIKSS---KMLDTVENSIGTFGKYPNTFQDT 102

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL- 179
           +K  IE  S+NPTGP+HVG  R +++GD++  ++   G     +Y++ND+G Q+ +L L 
Sbjct: 103 SKALIEHTSSNPTGPIHVGRIRNSIIGDSIFRIIERYGTRSLTQYFVNDSGKQVISLYLG 162

Query: 180 -------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
                        ++   YQ+   N DSD P+       +K   +EL +KY +      +
Sbjct: 163 HIKYHKDEEMTVENLLDGYQKIYTNIDSD-PD-------IKREVQELDEKYET-----GD 209

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            + +  +++ +   ++K I D L  L I    ++ E +F       +  +ID+L+     
Sbjct: 210 NELIKEIQN-TASIVLKSITDSLAKLGIHISTYVWESNFIM--YGNVAQLIDSLS----- 261

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E +    K+K  +  D   K++              L + DG+  YFA DL Y   K E
Sbjct: 262 -EDLKSEGKAKYIEIGD---KKIF-------------LTRQDGTSLYFARDLVYHMFKSE 304

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD +I V+G DH  + K L+ V     +  ++I+ L    V L       KMS R G+
Sbjct: 305 -NFDWIIDVLGEDHKDHAKNLDYVLHNYLDFPSRIDYLFYGFVSLDTG----KMSTRKGN 359

Query: 407 FITLR---------------------------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            +T+                             + + + + S+R+ ++    ++ L F +
Sbjct: 360 IVTVNDLYEKTVEESAAIIKQKRPEYSKEEVDKISNAIAASSIRYNIIKINANKPLTFRW 419

Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
            + +  +    P  Y+ YAYAR  S+  +               N      E++  E  L
Sbjct: 420 DEALNFEGDSAP--YIMYAYARACSLISKTG-------------NTESSTEEYNEFEKAL 464

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW------SHGRENPRLRFVQA 550
           I  +  YP  ++N+        +A Y+  L   F+  +       +  EN R+R V+A
Sbjct: 465 IKAMYVYPYYLQNSVDFLRADIIAGYILYLVKSFNEFYLNCPIIGNSEENKRMRIVRA 522


>gi|149052278|gb|EDM04095.1| arginyl-tRNA synthetase (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 591

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 184/383 (48%), Gaps = 43/383 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG----- 58
           + +SRL+       C IK     L+   +V+   +    G    N+AM +S+ L      
Sbjct: 75  NINSRLQELF---GCAIKAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 131

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  IAE I   +  +  +D V IAG GFIN++L   ++ + L++++V+G++    ++G
Sbjct: 132 VSPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLP--VLG 189

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  KV ++F S N    MHVGH R  ++G++++ L  F+GY V R  ++ D G Q   L 
Sbjct: 190 ENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLI 249

Query: 179 LSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             +  ++   L  +    DL + +Y     +   +E   K + E +   + K   I+K +
Sbjct: 250 AHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMKAW 308

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293
           ++  +  + R++   +    DI + E    RG+      ++DI+     +G+V       
Sbjct: 309 NL--ICDVSREEFNKIYDALDITLIE----RGESFYQDRMKDIVKEFEDKGFV------- 355

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352
                  + D D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +
Sbjct: 356 -------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKI 404

Query: 353 IYVMGSDHSGYVKRLEAVAAAVS 375
           IYV+ +  + + + + A A  + 
Sbjct: 405 IYVVDNGQATHFQTVFAAAQMIG 427


>gi|74227701|dbj|BAE35694.1| unnamed protein product [Mus musculus]
          Length = 447

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 169/344 (49%), Gaps = 38/344 (11%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      + P  IAE I   +  +  +D V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++    ++G   KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +    E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K +++  +  + R++ K +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           ++DI+     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           Y  +DLA  K + +E   + +IYV+ +  + + + + A A  + 
Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIG 427


>gi|291563033|emb|CBL41849.1| arginyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 588

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 135/602 (22%), Positives = 246/602 (40%), Gaps = 98/602 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA  +V ++K     + V     GFINL L+P
Sbjct: 33  RPDLCEY---QCNGAMAAAKTYKKKPIDIANGVVEQLKDSEVFEEVNAVMPGFINLKLNP 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L   ++ +     + G + + K   + I++  AN   P+HVGH R AV+G+ L  +  
Sbjct: 90  AFLSGYMNGMK-GAKKLGMDEVEKPETIVIDYGGANVAKPLHVGHLRSAVIGEALKRMGR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204
           F G++V  + ++ D G Q+  +   +  R  +  Y ++S    G YP            +
Sbjct: 149 FVGHKVIGDVHLGDWGLQMGLIIEELKDRKPELPYFDESFT--GEYPEEAPFTISELEEI 206

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-----QAMMKIIRDDLK----ALNIQ 255
           Y    GK   D+   E     +E    +   Y+      + +M +   DLK     L++ 
Sbjct: 207 YPAASGKSKVDEAFKER---AQEATFKLQSGYAPYRAIWKHIMNVSLKDLKRNYANLDVD 263

Query: 256 HDIFISEDDFHRGDPSPIRDIID-NLA--RQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            D++  E D     P  I+D+ D  LA   QG +   I  P  +K    C       + R
Sbjct: 264 FDLWKGESDAQPYIPGLIKDLQDKGLAYESQGALVVDIAEPTDTKELPPC-------IVR 316

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAV 370
                        KSDG+  Y  +DLA    + E+ F  D+ IYV+      +  ++  V
Sbjct: 317 -------------KSDGAALYATSDLATI-VEREQDFKPDHYIYVVDKRQELHFTQVFRV 362

Query: 371 AAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           A       A   +       +  +DG P K   R G  + L +++ ++   +   +M  R
Sbjct: 363 AKKAGIVPADRKMDFVGFGTMNGKDGKPFKT--REGGVMRLENLIADIDEAAYNRIMENR 420

Query: 430 KNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464
             SE           L    +  +  Q+ ++ VF              YV Y  AR  SI
Sbjct: 421 TVSEDEAKTTAEIVGLAALKYGDLSNQATKDYVFDIDRFTSFEGNTGPYVLYTIARINSI 480

Query: 465 FRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            ++  D   + +  ++ P +  P+++        L++ L+ Y  V+        P+K+  
Sbjct: 481 LKKYSDTCENTENGEILPPSAEPEKT--------LMLALSRYSDVMLTCFEELAPHKICA 532

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+Y+L++  + H+ H       + +   ++K     + LV     ++ + +N++G  +P 
Sbjct: 533 YIYELSNALN-HFYH-----ETKIIAEEDKKKQAGYISLVTLTRDVLMTCINVLGFSAPE 586

Query: 584 EM 585
            M
Sbjct: 587 RM 588


>gi|261491990|ref|ZP_05988566.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495282|ref|ZP_05991734.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309047|gb|EEY10298.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312361|gb|EEY13488.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 575

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 137/598 (22%), Positives = 236/598 (39%), Gaps = 114/598 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    ++   D + IAG GFIN++L+P +L +  
Sbjct: 37  GDYQANGAMGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENT 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +S  +  + +G       T V I++ S N    MHVGH R  ++GD +   +AF G  V 
Sbjct: 97  NS-SLQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHVSEMELSDLEAFYRAAKEHYDSDEAFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  + +DKY   +       W  +     V   M   +++   LN+       +D 
Sbjct: 215 ----VKLQSSDKYCLTM-------WKKL-----VDITMHHNQENYNRLNV---TLTEKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                 +P + +I+ +L  +G   E                D   ++F        GD +
Sbjct: 256 MGESLYNPMLPEIVADLKAKGLAVED---------------DGALVVFLDEFKNKDGDPM 300

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG + Y   D+A  K +YE    D  +    S  + ++++    A  ++ K  
Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITRKAG 356

Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
            + +    E     + L +DG P K   R+G  + L+ ++DE                  
Sbjct: 357 YVPDSFSLEHPFFGMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLIAERSTELTA 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 EEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFAR 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A     ++D D    ++   E +    E  L V L ++   +        P+ L  YLY+
Sbjct: 474 A-----NIDEDALSGSIQLNEPK----ERALAVKLLQFEEALNGVAKEGMPHILCQYLYE 524

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  F   +      P L   +         RL+L    A  +  GL+++G+++  +M
Sbjct: 525 LAGSFSSFY---EACPILNAEETTKNS----RLKLAALTAKTLKQGLDLLGIKTVEKM 575


>gi|241948189|ref|XP_002416817.1| arginine-trna ligase, putative; arginyl-trna synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223640155|emb|CAX44402.1| arginine-trna ligase, putative [Candida dubliniensis CD36]
          Length = 643

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 128/549 (23%), Positives = 222/549 (40%), Gaps = 85/549 (15%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  Y + + L   ++  ++    +YG   +G G K  +EF S N   P H GH R  ++
Sbjct: 129 FLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 188

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203
           G  +++L    G++VTR  Y+ D G Q   LA+  F R     Y ++S L   P  +   
Sbjct: 189 GGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FER-----YGDESKLASDPINHLFE 242

Query: 204 VYLKHVGKELADKYSSELLNFP---------EEKWLPIVKDYSVQAMMKIIRD-DLKALN 253
           VY+K + +++A + S      P         +EK +    +   +   + + D D  AL 
Sbjct: 243 VYVK-INQDVAKETSEATGETPGESIDASEQDEKKIQSSTNEEARKFFRRMEDGDESALK 301

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK------- 301
           I          + R     I   +D   R    Y     E  +P  K K   K       
Sbjct: 302 I----------WARFRDLSIEKYVDTYGRLNIKYDVYSGESQVPQDKMKEATKLFEDKGL 351

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
            D+DR   L   T     + + L+ KSDG+  Y   D+     +YE   FD MIYV+ + 
Sbjct: 352 IDIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQ 411

Query: 360 HS---------------GYVKRLE----AVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                             +   LE     +   +S +K  + V L  +++  ++ M   M
Sbjct: 412 QDLHCAQFFEILKQMGFEWAHNLEHINFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVM 470

Query: 401 SKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456
            K    +  +     + D +G  +V    +  K     +F + ++   +    P  Y+QY
Sbjct: 471 QKNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQY 528

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A++R  S+ R++     +L+   F   V P  S        L   LA+YP VI+ A    
Sbjct: 529 AHSRLCSMQRKSGISIEELEHANFELLVEPCAS-------ALARTLAQYPDVIKKAVKGL 581

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  YL+ +  +    +        + +V    +++ + RL L  A   +IN+G+ +
Sbjct: 582 EPSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKEVAIARLALYEAARQVINNGMTL 634

Query: 577 IGVESPNEM 585
           +G+   N M
Sbjct: 635 LGLTPVNRM 643


>gi|328883223|emb|CCA56462.1| Arginyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 591

 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 137/597 (22%), Positives = 249/597 (41%), Gaps = 102/597 (17%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  +VA I  +  +  + ++G GF+N+ ++ + + + L++
Sbjct: 41  FQANGILALAKQLKGNPRELATQVVAAIPENDVLKDIEVSGPGFLNITVTDAAIVRTLAA 100

Query: 105 IVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  G+ +  +    GT V I++   N    MHVGH R AV+G  +  ++ F+G  V
Sbjct: 101 RAADARLGVPFNES---AGTTV-IDYAQPNVAKEMHVGHLRSAVIGAAMVEILEFTGETV 156

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            R ++I D G Q   L +     +   L + D D  E     V  +     L   Y +  
Sbjct: 157 VRRHHIGDWGTQFGML-IQYLIEHPHELDHKDEDGAE-----VSGEEAMSNLNRLYKASR 210

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDII 277
             F  +      +++  +A  +++  DL+A + +       F+ E   +      + D +
Sbjct: 211 ALFDSD------EEFKTRARARVV--DLQAGDERTLALWQRFVDESKIYF---YSVFDKL 259

Query: 278 DNLARQGYV-----YEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP---- 323
           D   R G V     Y  +L       T+ C  ++   +  RS     +  DDV  P    
Sbjct: 260 DMDIRDGDVVGESGYNDML-------TETCRILEESGVAVRSEGALCVFFDDVKGPDGNP 312

Query: 324 ----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               + KSDG + Y A DL+  + + +     +++YV+ +  S + K +   A       
Sbjct: 313 TPLIVQKSDGGFGYAATDLSAIRDRVQNLKATSLLYVVDARQSLHFKMVFETARRAGWLN 372

Query: 379 AQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
             +  V L     L +DG P K   R G+ + L  ++DE                     
Sbjct: 373 EDVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVDRATSVVREKAEKVGLTES 430

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SIF +A
Sbjct: 431 EIVENGQYVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIKSIFGKA 489

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            D  P          V   E E   +E  L +HL ++   + +A     P+KL  YLY L
Sbjct: 490 GDRTP----------VAHPELELAPAERALGLHLDQFAETVSDAATEYAPHKLTAYLYQL 539

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS++   +    + P ++   A  +++   RL L    A  ++ G+ ++G+ +P  +
Sbjct: 540 ASLYTTFYD---QCPVIKPEPA--QEVAENRLFLCDLTARTLHQGMALLGIRTPERL 591


>gi|15894328|ref|NP_347677.1| arginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|23822201|sp|Q97K78|SYR_CLOAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15023953|gb|AAK79017.1|AE007619_9 Arginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508456|gb|ADZ20092.1| arginyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 563

 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 237/549 (43%), Gaps = 113/549 (20%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN ++  + + ++ + S++     YGR+ +G+G KV IE+ S N   P HVGH    V+
Sbjct: 77  YINFFVDKADFAKETIESVLSERDNYGRSKVGEGKKVLIEYSSPNIAKPFHVGHLFGTVL 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G +L  + +  GY+  R  ++ D G Q   L +S + R+  + ALY +    P      +
Sbjct: 137 GSSLYKIFSMEGYDCVRINHLGDWGTQFGKL-ISAYKRWCDEDALYKD----PIKELLRI 191

Query: 205 YLK-HVGKE----LADK---YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALN 253
           Y+K H   E    L D+   Y   L +  +E+   W    KD S++   K+       + 
Sbjct: 192 YVKFHKEAEKDPLLEDEGRMYFKRLEDGEKEEVELWTKF-KDLSLREFKKVYNQ----IG 246

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++ D +  E        S   D ID +  +                    ++ K LL  S
Sbjct: 247 VEFDSYTGE--------SFYSDKIDAIEEE--------------------LNEKGLLTES 278

Query: 314 T----MVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGY 363
                ++ D+ + P   + K+DG+  Y   DLA   Y K  Y   FD  IYV+G + S +
Sbjct: 279 NGAKVVMLDEYNMPPCIIKKADGASIYATRDLAAAEYRKKTY--NFDKSIYVVGLEQSLH 336

Query: 364 VKR-LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
            K+ L+ +  A  E       +   LVR + +G   K+S R GD I L  ++ E      
Sbjct: 337 FKQFLKTLELAGHEWSKDCIHVGYGLVR-FAEG---KLSTRNGDVIFLEDLLKESVQKTS 392

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456
                              VG  +V F  L       + FD+ ++   + +  P  YVQY
Sbjct: 393 EIIEEKNPELDNKEEVSRKVGIGAVIFTYLKNGRERDIIFDWKEMLSFEGETGP--YVQY 450

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +YAR +SI R+  ++  ++ +D     ++  E EFD     LI  L  +   I NA    
Sbjct: 451 SYARAKSILRKLGEVKGNVSYD----KLVSAE-EFD-----LIKQLKGFNGAILNAIDRL 500

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  Y+ ++A  F+  ++             ++ +L   RL LV A + +I + L++
Sbjct: 501 EPSVITRYVIEVAKAFNKFYNA------YNISNTSDEELKNARLALVEAASIVIKNALSL 554

Query: 577 IGVESPNEM 585
           IG++   EM
Sbjct: 555 IGIDVVEEM 563


>gi|228991186|ref|ZP_04151145.1| Arginyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228768599|gb|EEM17203.1| Arginyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 562

 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 143/613 (23%), Positives = 251/613 (40%), Gaps = 137/613 (22%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG---FI 89
           +IE P+    G  +    M L++     P  IA+ I  ++      +S F   +    ++
Sbjct: 27  LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKLN-----NSFFTKVEAVGPYV 80

Query: 90  NLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N++ +   +   +L +I+V   EYG+   G+   V I++ S N   P  +GH R  ++G+
Sbjct: 81  NVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPNIAKPFSMGHLRSTMIGN 140

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +L  +    GYEV    YI D G Q   L  +    Y++  + N+  + E     ++  +
Sbjct: 141 SLKHIAEKCGYEVVGINYIGDWGTQFGKLITA----YKK--WGNEELVKEDPIRELFKLY 194

Query: 209 VGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFI 260
           V       +  E+   PE       W   ++D   +A+        + LK  +  +++  
Sbjct: 195 V------HFHEEVKEHPELEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLG 248

Query: 261 SEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            E    +G+      + D +D L  +G + E       S   Q  +++++ +        
Sbjct: 249 VEFTNFQGEAFYNDKMGDFVDILEEKGLLEE-------SDGAQVVNLEKEDM-------- 293

Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                P L  KSDG+  Y   DL    Y +  YE  FD  +YV+G++ S +  +   V  
Sbjct: 294 ----PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLK 347

Query: 373 AVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAG----------------------- 405
            +     +  A +   L     + +DG   KMS R G                       
Sbjct: 348 KLGYNWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAITLAEQNIEEK 400

Query: 406 --DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYAR 460
             D      V  +VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR
Sbjct: 401 NPDLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFFLEKMLKFEGETGP--YVQYTHAR 456

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL--------IVHLAEYPRVIENA 512
             SI R+                   + +EF+T   QL        I  L  +P+V+E A
Sbjct: 457 ACSILRK-------------------ENAEFETEAFQLNDDHSWSTIKLLNRFPQVVETA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  +A YL D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  
Sbjct: 498 FFKNEPSHIAKYLLDVAQAFNKYYGN------VRILEEDKEKES--RLALVYAVTIVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++G+ +P EM
Sbjct: 550 GLRLLGMGAPEEM 562


>gi|225028848|ref|ZP_03718040.1| hypothetical protein EUBHAL_03135 [Eubacterium hallii DSM 3353]
 gi|224953844|gb|EEG35053.1| hypothetical protein EUBHAL_03135 [Eubacterium hallii DSM 3353]
          Length = 564

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 140/580 (24%), Positives = 245/580 (42%), Gaps = 105/580 (18%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGI 110
           L+R     P  IAE + A+I     D+    +    +IN +L+  ++ ++I+++  V   
Sbjct: 43  LARVFRKAPNMIAEELTAQINEKGYDIFDKVVNVGAYINFFLAKEAFAKEIMNT--VDTP 100

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++G+   G+G  V I++ S N     HVGH R  ++G++L  + +  GY V R  ++ D 
Sbjct: 101 DFGQGTEGEGKTVCIDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYHVERINHLGDW 160

Query: 171 GAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF---- 224
           G Q   L ++   W  ++A+  N  D        +Y+K H   E  D  + +   +    
Sbjct: 161 GTQFGKLIVAYKKWGSKEAVEENGID----ELMKIYVKFHQEAEKDDSLNDQAREWFVKM 216

Query: 225 --PEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +E+ L I    KD S+    +I     K L +  D F  E  F+R       ++++ 
Sbjct: 217 EQGDEEALSIWQWFKDISLVEYKRI----YKLLGMDFDHFTGES-FYR---DKTHEVVEK 268

Query: 280 LARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           L  +  + E     I+P          D D    L             ++K DGS  Y  
Sbjct: 269 LQEKDLLVESEGAHIVPLD--------DYDMAPCL-------------IMKKDGSSIYAT 307

Query: 336 ADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
            DLA   Y K  Y   FD  IYV G +   +  ++  V   +     Q N++      + 
Sbjct: 308 RDLAALLYRKRTY--NFDKCIYVTGLEQKLHFAQVFKVIELLGYDWYQ-NLVHVPYGLVS 364

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMML 427
            +G   K+S R G+ I    ++ E                         VG  ++ F  L
Sbjct: 365 MEGG--KLSTRNGNVIYAEQILHEAIEKIHEIINEKNPDLPNKEEVSRQVGIGAILFNDL 422

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVI 485
           + +  + + F++ K+     E    YVQY YARC S+FR+  A ++  ++D+ +      
Sbjct: 423 YNQRIKDVIFNWDKILNFDGETGP-YVQYTYARCASVFRKVGAVELPAEIDYSVLT---- 477

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 D + + L+  L  +P VI+ A    EP+ +A +   +A  F+  +   + N   
Sbjct: 478 ------DDATMNLLKDLTRFPEVIKEAADKYEPFMIARFAVSVAQHFNKFYHDCQIN--- 528

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V+  N KL   RL++V     +I S L+++G+E P +M
Sbjct: 529 --VEEENVKLA--RLKVVDVTMKVIKSALDLLGIECPEQM 564


>gi|254422588|ref|ZP_05036306.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190077|gb|EDX85041.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 585

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 231/595 (38%), Gaps = 111/595 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++PL ++P  IA  I A + +    +   IAG GFIN  L   YL + L
Sbjct: 40  GDYQANVAMSLAKPLRMNPRAIATKITANLDVTNICEPPSIAGPGFINFKLKTEYLEQQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             +  S    G        KV +++ S N    MHVGH R AV+G+  A ++ F G++V 
Sbjct: 100 KEMHSSD-RLGVPKANPPQKVIVDYPSPNIAKEMHVGHLRPAVIGECFARVLEFLGHDVL 158

Query: 163 REYYIND---------------------AGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           +  ++ D                     A A   T  L+ F+R  +  ++ D    E   
Sbjct: 159 KVSHVGDWGTPFGMLIAYLQEAYPDPQAAAAASTTGELATFYRQAKKRFDTDEAFKENAR 218

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             V     G +              E W  + +  S ++  KI   DL  LNI  DI   
Sbjct: 219 QAVVKLQAGDQAV-----------LEAWQRVCQ-LSKRSYRKIY--DL--LNISEDIIDR 262

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            + F+  +P  + D++ +L + G + E              D   K +        D   
Sbjct: 263 GESFY--NPY-LADVVTDLDKAGLLVE--------------DDGAKCVFLEGFTNKDGEP 305

Query: 322 RPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSE 376
            PL+  KS+G Y Y   DLA  + +  E   D ++Y   +  + +  +   VA  A    
Sbjct: 306 LPLIVQKSNGGYNYATTDLAALRYRITEDKVDRIVYSTDAGQANHFSQFFQVARRAGWVP 365

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           +  +++     LV+   DG  +K   R+G+ + L+ ++DE                    
Sbjct: 366 ESVELSYAPFGLVQ-GEDGKRLK--SRSGEVVPLQELLDEAIARTRTDVEGRLQQEERTE 422

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      VG  +V++  L +       F + ++    + N   Y+ YAY R + I 
Sbjct: 423 SDDFIQNVAEKVGIGAVKYADLSQNRISNYTFSYDRML-ALQGNTAPYMMYAYVRVQGIS 481

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+ +     LD          Q    + SEL L  HL +   V+        P +L  YL
Sbjct: 482 RKGEIDLSTLD---------AQVKLTEESELTLAKHLLQLDEVLAEVEKELLPNRLCQYL 532

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           ++L+  F+  +           +QA   + T  RL L    A  +  GL+++G++
Sbjct: 533 FELSQKFNQFYDQ------CSVLQAEEPQRT-SRLVLCDLTARTLKLGLSLLGID 580


>gi|71282384|ref|YP_267854.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|109894983|sp|Q487B1|SYR_COLP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71148124|gb|AAZ28597.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 582

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 132/607 (21%), Positives = 236/607 (38%), Gaps = 114/607 (18%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP+    G    N  M  ++ L  +P  +A  +VA + +D     + +AG GFIN++L  
Sbjct: 33  RPQ---FGDYQANGVMGAAKKLKTNPRELATKVVAELDLDGIASKIELAGPGFINIHLDE 89

Query: 96  SYLRKILSSIV----VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           S+L   L+ +     +   + G     +   V +++ + N    MHVGH R  ++GD + 
Sbjct: 90  SWLAAQLNEVAQDDFIGVAQRGTTPGDESQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVV 149

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNN 192
             + F G +V R+ ++ D G Q   L                    L  F+R  +  ++N
Sbjct: 150 RALEFRGDKVIRQNHMGDWGTQFGMLIAHLSDKLASDEVAETALADLENFYREAKVRFDN 209

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           +    +     V     G E   K   + ++      + I     + A + +    LK  
Sbjct: 210 EEGFADRARADVVKLQSGDEACAKLWQQFID------ISITHSEEIYAKLNV---SLKRS 260

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +I  +   ++D         +  ++D L  +    E                   +++F 
Sbjct: 261 DIMGESAYNDD---------LSTVVDELMAKKIAEES---------------QGAKVVFI 296

Query: 313 STMVGDDVDRPLL---KSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKR 366
           + M   D + P+    KS G + Y   DL+   C+Y  G    + +I    +  + + K+
Sbjct: 297 NEMANKDGEAPVFIVQKSGGGFLYATTDLS--ACRYRSGKLAANRIIIFTDARQALHFKQ 354

Query: 367 LEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +E VA         +    C   + +  DG P K   R G  I L  ++DE         
Sbjct: 355 VEIVARKAGLLPENVGYQHCPFGMMMGDDGKPFKT--RTGGTIKLAELLDESIVRAAALI 412

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             VG  +V+F  L +  +    FD+ K     +     Y+QYAY
Sbjct: 413 KEKNPDITDTDLTEISKKVGIGAVKFADLSKNRTSDYIFDW-KTMLSFEGATAPYLQYAY 471

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +R +SIF +A  +  D   ++      PQE         L + L +   V++       P
Sbjct: 472 SRIQSIFSKAGTVKNDAVINIIE----PQEK-------ALALKLLQLEDVVDAVISECTP 520

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  YLY+LAS++   +      P L+  +  + ++   RL L + VA  +  GL+I+G
Sbjct: 521 NLLCNYLYELASLYMSFY---EACPILK--EGISGEVKASRLALCNVVADTLKQGLDILG 575

Query: 579 VESPNEM 585
           +E+   M
Sbjct: 576 IETMERM 582


>gi|48477675|ref|YP_023381.1| arginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430323|gb|AAT43188.1| arginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 542

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 131/569 (23%), Positives = 243/569 (42%), Gaps = 100/569 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF D+  +L   + +++   K+E K       +   +  HG +S     I       D
Sbjct: 1   MLLFDDYKRQL---ITKLNSVYKIEDK-------DAEINTEHGDISIRLFRIKD-----D 45

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I   I   +K +  ++   I G+ ++N++L    +  IL         Y  ++    
Sbjct: 46  PEVIKNNIYNILKKEAYIERFEINGR-YLNIWLKTRLMFDILLDAFDRLGTYP-DVFQDA 103

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +E  SANPTGP+H+G  R +++GD++A ++  +G  V  +YY+ND+G Q+    L 
Sbjct: 104 EKALVEHTSANPTGPIHIGRTRNSIIGDSIARIIERTGMRVMTQYYVNDSGKQV----LY 159

Query: 181 VFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           ++  Y++   N +    +L +G Y  +Y  ++ + + ++  SEL    E+     +K   
Sbjct: 160 LYIGYEKFHKNEEPTVENLLDG-YQKIY-NNIDESIENE-VSELSRLYEKGDTETIKKIQ 216

Query: 238 VQA--MMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             A  ++  I + LK +++    ++ E  F   G  S +  +++N               
Sbjct: 217 NIAGIVLSSIMESLKKIDVNIMSYVWESSFIINGSTSRVMSMLEN--------------- 261

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMI 353
               + K D D K + +    +       L +SDG+  YF  D+AY    Y+ G +D +I
Sbjct: 262 ----SIKNDGDAKYIEYNGRKI------YLTRSDGTSLYFVRDIAY--HLYKAGDYDFII 309

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V+G DH  + + LE V   + +  A +  +  + + L   G   KMS R G+ +TL  +
Sbjct: 310 DVLGEDHKEHARNLEYVLKDLLDFNANLRFVFYDFISL-ESG---KMSTRKGNIVTLDEL 365

Query: 414 VDEVGSDSVRFMMLWRKN--------------SELLDFDFCKVKEQS------------K 447
            ++   +S++ +   R                S  + F+  KV +              +
Sbjct: 366 YNKTVDESIKIVKEKRPEYSEEKAREIAVAIASSSIRFNISKVNQNKPMTFRWSEALNFE 425

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+ YAYAR +SI R+               N   + ++F+  E  LI  +  YP 
Sbjct: 426 GDSAPYIMYAYARAKSIIRK------------ISENNTGELNDFNDYERSLIKDMFLYPY 473

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHW 536
            +++A     P  +A YL  L   F+  +
Sbjct: 474 YLKSAFENLRPDIIANYLLLLVKSFNDFY 502


>gi|326692775|ref|ZP_08229780.1| arginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 563

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 242/594 (40%), Gaps = 99/594 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IVA  +ID       +A   ++N +L
Sbjct: 27  LEAPKSSELGDVAF-PTFTLAKVLRQAPQQIAANIVA--EIDQTGFEKVVATGPYVNFFL 83

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              +  R+ L +I+    +YG N  G+G  V I+  S N   PM +GH R  V+G+ LA+
Sbjct: 84  DKVATSRETLQTILTLKADYGNNTDGQGENVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           + A +GY+  +  ++ D G Q   L       Y    + ++ ++     P   L     E
Sbjct: 144 ITAKNGYQPIKINHLGDWGTQFGKLI------YAYKTWGSEDEVKAD--PIATLLRYYVE 195

Query: 213 LADKYSS-ELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261
             DK    + LN     W   ++D   +A+          +K   +    L+I  D F  
Sbjct: 196 FHDKAKEDDSLNDAGRAWFKKLEDGDEEALALWAWFREESLKEFTEIYDRLDIGFDSFNG 255

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  ++      +  ++D L  +  +         S+  Q  D+          M+     
Sbjct: 256 EAFYN----DKMDTVVDQLTAKDLLV-------TSQGAQIVDLSDINPNLTPAMIK---- 300

Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               ++DG+  Y   DLA   Y K  Y+  F   +YV+G +   +  +++AV + +  + 
Sbjct: 301 ----RTDGATLYMTRDLAAAVYRKDTYD--FAKSLYVVGGEQREHFVQMKAVLSLMGFEW 354

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------------HV 413
           A  +V       +  +G   KMS R GD + L+                          V
Sbjct: 355 AD-DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLNDAHDLALKQIQEKNPTLENKEEV 411

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
            ++VG+ +V F  L    +   DF+  + V+ +    P  YVQY  AR +SI R+A    
Sbjct: 412 AEQVGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKA---- 465

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                   P +V       D      +I  L  +P  ++ A   +E   +A Y   L+  
Sbjct: 466 --------PVSVSLDAVTLDDPMTWDIITTLNSFPATVQRAWQQREASIIAKYALTLSRA 517

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ ++++ +       +  ++ +L   RL LV AV  ++   L ++GV++P EM
Sbjct: 518 FNKYYANSK-------ILTDDDQL-QARLALVEAVTIVLTESLRLLGVKAPEEM 563


>gi|325134676|gb|EGC57316.1| arginyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325143433|gb|EGC65760.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 572

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 123/588 (20%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+     
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKTG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDADAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|321455642|gb|EFX66770.1| hypothetical protein DAPPUDRAFT_302451 [Daphnia pulex]
          Length = 632

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 250/592 (42%), Gaps = 92/592 (15%)

Query: 43  GHLSTNAAMILSRPL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ L      L+P  +A  +   +  +  ++++ +AG GFIN+ L  S+
Sbjct: 84  GDYQFNGAMSLSKLLKTLGKSLNPREVAAAVQKCVPPNEVIETLDLAGPGFINIKLKASF 143

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +++ LS +V  GI     +  K  +V ++F S N    MHVGH R  ++GD++  L+ F 
Sbjct: 144 VQEQLSLLVTRGIRPPCGVEKK--RVMVDFSSPNIAKEMHVGHLRSTIIGDSICRLLEFL 201

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  ++ D G Q   L   +  R+         +  E   P   L+   KE   ++
Sbjct: 202 GHDVLRINHVGDWGTQFGMLLAHLEDRF--------PNFAEETPPIGDLQSFYKESKIRF 253

Query: 218 SSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            S+  +F +  +  +VK  S         QA+  + R + + +  + DI I E    RG+
Sbjct: 254 DSD-ADFKKRAYACVVKLQSHDPVYIKGWQAICDVSRREFQKIYDRLDIKIKE----RGE 308

Query: 270 PSPIRDIIDN----LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            S  +D++      L   G + E              D  RK +       G  V   ++
Sbjct: 309 -SFYQDLMKKTVMLLEEAGVLKE--------------DEGRKVMF----APGIAVPLTIV 349

Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQI 381
           KSDG YTY  +D+A  + + ++   D ++YV+    SG+ + + A    A  +  KK ++
Sbjct: 350 KSDGGYTYDTSDMAAIRQRVHDEAADWVVYVVDLGQSGHFETIFACAEFAGWLDRKKTRV 409

Query: 382 -----NVLLCE--------------LVRLYRDGM---PIKMSKRAGDFI----TLRHVVD 415
                 V+L E              LV L  +G+     K+ ++  D +     L     
Sbjct: 410 EHVGFGVVLGEDRKKFKSRSSETVRLVDLLDEGLRRAKEKLIEKERDKVLTPEELESAQQ 469

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            V    +++  L    +    F F K+ E  K N   Y+ YAY R RSI R A     D 
Sbjct: 470 AVAYGCIKYSDLAHNRNGDYVFSFDKMLE-DKGNTAVYLLYAYTRIRSIARTAN--VTDE 526

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                  + IP   E    E++L   L  +P  I   T     + L  +LY++++ F   
Sbjct: 527 QIKKAAADGIPLSHE---KEMKLAKLLLRFPETIVRLTFDLCLHPLCEFLYEVSTTFTEF 583

Query: 536 W--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   +  E  R          + M R+ L  A A+++    +++G++   +M
Sbjct: 584 YDVCYCVEKDR---TTGQIVHINMDRMALCEATANVMAQCFSLLGLKPIQKM 632


>gi|81429031|ref|YP_396031.1| arginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|109894998|sp|Q38VQ9|SYR_LACSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78610673|emb|CAI55724.1| Arginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 563

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 133/595 (22%), Positives = 259/595 (43%), Gaps = 100/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P+    G  +     IL++ L   P  IA+ +V ++ +    + V IA   +IN +
Sbjct: 27  LIETPKTSDLGDYAF-PTFILAKTLRKAPQQIAQDLVDQMDV-AGFEKV-IANGPYINFF 83

Query: 93  L-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   ++  +IL +++    +YG + +G G  V I+  S N   P+ +GH R  V+G+++A
Sbjct: 84  LDKAAFSDQILKTVLTEAAKYGESDLGHGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G+   +  ++ D G Q   L ++    Y++  + ++ ++ E     +   +V  
Sbjct: 144 KILTKVGFNPIKINHLGDWGTQFGKLIVA----YKK--WGSEEEVKEDPITNLLKYYV-- 195

Query: 212 ELADKYSSELLNFPE-----EKW---LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
               K+  E +  PE       W   L    + + Q       + LK     +D+   E 
Sbjct: 196 ----KFHQEDVEHPELDDEARAWFRKLEAGDEEATQLWSWFRSESLKEFQKIYDMLGVEF 251

Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           D + G+      +  +++ +  +G + E       S+  +  D+    L           
Sbjct: 252 DSYNGEAFYNDKMDAVVEAIESKGLLQE-------SRGAEIVDLTAYNL----------- 293

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV------- 370
             P L  KSDG+  Y   DLA    +++   F   +YV+G +   +  +L+AV       
Sbjct: 294 -NPALIKKSDGATLYMTRDLAAAMYRHDTYNFVQSLYVVGGEQREHFNQLKAVLKEMGND 352

Query: 371 ----------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                              +S +  ++ +LL E++         ++  +  D      V 
Sbjct: 353 WSDEIHHIPFGLITQGGKKLSTRSGRV-ILLEEVLNDAVKLAGAQIEAKNPDLPNREEVA 411

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQA-KD 470
            +VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR +SI R+A ++
Sbjct: 412 KQVGIGAVIFHDL--KNDRLDNFDFDLEEVVRFEGETGP--YVQYTNARAQSILRKANQE 467

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           +  D         V+  ++ +D  ++     L+ +P VI  A+   EP  +A Y   LA 
Sbjct: 468 VVVDDQL------VVADDNAWDVLKM-----LSNFPAVIARASKEYEPSIVAKYALRLAK 516

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+ ++++ +       + A++ +    RL LV +V+ ++ + L+++GV++P EM
Sbjct: 517 AFNKYYANSK-------ILADDDQRNA-RLSLVKSVSIVLETALDLLGVQAPKEM 563


>gi|227534771|ref|ZP_03964820.1| arginine--tRNA ligase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187527|gb|EEI67594.1| arginine--tRNA ligase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 560

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 250/597 (41%), Gaps = 103/597 (17%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           + +IE P+    G  +      L++ +   P  IA  +V +I + P  + V   G G++N
Sbjct: 25  KSLIETPKSSDLGDYAF-PTFSLAKIMHRAPKMIASDLVGQIDVTP-FEKVKAVG-GYVN 81

Query: 91  LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            YL   S+   +L  I  +G  YG   IG G  V I+  S N   PM +GH R  V+G+ 
Sbjct: 82  FYLDKISFAHDVLKVIAQAGEHYGDANIGSGN-VPIDMSSPNIAKPMSMGHLRSTVIGNA 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLK- 207
           LA++++  GY   +  ++ D G Q   L ++   W  + A+  +       YY   + K 
Sbjct: 141 LANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWGSEDAVKADPIKNLLHYYVEFHEKA 200

Query: 208 HVGKELADK---YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
               EL D+   +   L +  EE     +W   V       + KI+  D  + N   + F
Sbjct: 201 EANPELGDEARAWFKRLEDGDEEAIALWRWFRTVSLAEFNRIYKILGVDFDSYN--GEAF 258

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGD 318
            ++          + D++  L  +  +          KT+Q  ++ D         ++  
Sbjct: 259 YNDK---------MADVVKRLEDKHLL----------KTSQGAEIVDLSAYNLNPALIK- 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV------- 370
                  KSDG+  Y   DLA    + E   F   +YV+G++   + ++L+AV       
Sbjct: 299 -------KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYD 351

Query: 371 ----------------AAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLR 411
                              +S +K   N++L E   + RD + +   +++++  D     
Sbjct: 352 WANDIHHIPFGLITANGKKLSTRKG--NIILLE--NVLRDAVGLAKQQIAEKHPDLPNAD 407

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQA 468
            V  EVG  +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI R+A
Sbjct: 408 KVAHEVGVGAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARANSILRKA 463

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
             I P            P+ +  D +   ++  L +YP ++  A    EP  +A Y   L
Sbjct: 464 A-IDP-----------APEVALSDPAAWDVLRALGDYPSMVLRAAKEYEPSVIAKYALRL 511

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ ++++ +       V   + +L   RL +V A   ++ + L ++GV +P EM
Sbjct: 512 AKAFNKYYANVK-------VLVEDSELPA-RLAMVKATTQVLTNALQLLGVGAPEEM 560


>gi|312882113|ref|ZP_07741863.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370249|gb|EFP97751.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 577

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 136/603 (22%), Positives = 236/603 (39%), Gaps = 122/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG++P   A+ ++  +K+D       IAG GFIN++LS  +L    
Sbjct: 37  GDYQANGVMGVAKKLGMNPREFAQKVIDELKLDGIASKTEIAGPGFINIFLSEEFL-ATQ 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +   +S    G +   + T V  ++ + N    M V H R  V+GD +   + F G++V 
Sbjct: 96  ADYALSDDRLGIDKEKQQTVVT-DYSAPNVAKEMAVHHIRSTVIGDAVTRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           R  +I D G Q   L                    L  F+R  + L++ D    E +   
Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRDSKKLFDED----EAFATK 210

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQH 256
                V  +  D+Y + +       W  +V    +Q         + + RDD+   ++ +
Sbjct: 211 ARNYVVKLQSGDEYCAGM-------WKKLVDITMIQNQRNYDRLNVSLSRDDVMGESMYN 263

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+              +  I+ +L ++G V E        +  Q   +D     F++   
Sbjct: 264 DM--------------LGGIVADLKKKGLVEE-------DEGAQVVFLDE----FKNK-D 297

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G+ +   + KSDG + Y   D+A  K +YE  G + ++Y + S    ++ +    A  + 
Sbjct: 298 GEPMGVIVQKSDGGFLYTTTDIACAKYRYETLGANRVLYFIDSRQHQHLMQ----AWTIV 353

Query: 376 EKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            K   I  NV L      + L +DG P K   RAG  + L  ++DE    + +  ++  K
Sbjct: 354 RKAGYIPENVTLEHHAFGMMLGKDGKPFKT--RAGGSVKLTDLLDEAEERAAK--LIESK 409

Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462
           N +L           +     K  + SK                  N   Y+QYAY R  
Sbjct: 410 NPQLSAEEKTAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF +A+     L  D+            D  E  LI  L ++   ++       P+ L 
Sbjct: 470 SIFAKAEISMDSLQGDI---------KIVDEKEKALITKLLQFEEAVKAVASEGLPHVLC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +           +   +  +   RL+L    A  I  GL+++G+E+ 
Sbjct: 521 TYLFELAGQFSSFYE------ACPILNNEDESIKQSRLKLAALTAKTIKQGLDLLGIETL 574

Query: 583 NEM 585
             M
Sbjct: 575 ERM 577


>gi|325205746|gb|ADZ01199.1| arginyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 572

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 123/588 (20%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+     
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKTG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDADAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|228470787|ref|ZP_04055635.1| arginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307460|gb|EEK16465.1| arginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 604

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 132/586 (22%), Positives = 237/586 (40%), Gaps = 98/586 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGK 119
           P   AE I A+++   D+ + +   KGF+NL L+ S     L  I  +   YG      +
Sbjct: 56  PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDSAWLAALREIAETP-HYGHITPTEQ 114

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G +LA ++  SG+ V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           + + R+        S     +  G Y     KE    Y +EL     E   P   D  V+
Sbjct: 175 A-WLRWGNGETPESSGKKGDHLIGDYYVRFDKE----YRAELAQIRAEH--PDWSDEEVE 227

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287
           A  +++ D  + L            + +GDP  +R +             +   R G  +
Sbjct: 228 AKSQLMADARQMLR----------QWEQGDPE-VRALWRKMNEWVYKGFDETYKRMGVSF 276

Query: 288 EGILPPPKSKTTQKCDMDR--KQLLFRSTMVG--------DDVDRP-LLKSDGSYTYFAA 336
           + I     +    + ++ R  K+ LF     G        + +D+  LL+SDG+  Y   
Sbjct: 277 DKIYYESDTYLVGREEVLRGLKEGLFEQHEDGSVWADFEAEGLDKKILLRSDGTSVYITQ 336

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394
           D+   K +Y+    D MIYV+G++   + + L  +   +  K  + +      +V L   
Sbjct: 337 DIGTAKLRYQDFPIDQMIYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPHG 396

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------------KNSELLDFD 438
               KM  R G  +    ++D +   ++      +                + +E++   
Sbjct: 397 ----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVALADKPTAEELRTAEMVGLG 452

Query: 439 FCK---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
             K   +K   ++N +F              ++QY YAR  S+ ++A +        +  
Sbjct: 453 ALKYFILKVDPRKNMMFNPEESIDFNGNTGPFIQYTYARICSLLQKADE--------MGY 504

Query: 482 RNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           ++ +P+  E   S  E  L+  L +YP V++ A  +  P ++A Y YDL   ++  +   
Sbjct: 505 KHQLPEGGELALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYH-- 562

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   ++  +  L  MRLQL   VA  I+S + ++G+  P  M
Sbjct: 563 ----ECSVLREEDEALRSMRLQLSQTVAETIHSAMGLLGIALPERM 604


>gi|66912037|gb|AAH97633.1| LOC733251 protein [Xenopus laevis]
          Length = 650

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 147/588 (25%), Positives = 245/588 (41%), Gaps = 83/588 (14%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +++ L      + P  IA+ IV  I  +  V+ V IAG GFIN++L   +
Sbjct: 101 GDYQCNSAMGITQMLKAMNQKVSPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDF 160

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             K LS ++V+G++    +I +  +V ++F S N    MHVGH R  ++G+++  L  F 
Sbjct: 161 TSKQLSKLLVNGVQ--PPVIEEKKRVVVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFV 218

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  ++ D G Q   L   +  ++   L  +    P G            +L   Y
Sbjct: 219 GHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTISP---PIG------------DLQSFY 263

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F E++         V  +     D ++A N+  +  +S  +F +        I 
Sbjct: 264 KESKKRFDEDEEFKKRAYQCVVQLQNKTPDIIQAWNLICE--VSRREFQK--------IY 313

Query: 278 DNL-----ARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           DNL      R    Y+    G++   + K   + D  RK ++F     G  +   ++KSD
Sbjct: 314 DNLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGRK-VVFPP---GCSIPLTIVKSD 369

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-------------GY----VKRLEAV 370
           G +TY  +DLA  K +  E   D +IYV+ S  +             G+    V R+E  
Sbjct: 370 GGFTYDTSDLAALKQRLQEEKADMLIYVIDSGQAIHMQNVFSAGQMIGWYDPKVTRVEHA 429

Query: 371 AAAV--SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVG 418
              V   E K +      + VR   L  +G+   M K   +  D +     L      V 
Sbjct: 430 GFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKDKGRDTVLTPEELLAAQRSVA 489

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              +++  L         F F K+ +  + N   Y+ YAY R RSI R A     DL   
Sbjct: 490 FGCIKYADLSHNRMNDYIFSFDKMLD-DRGNTAAYLLYAYTRIRSIARLANISDDDLHKA 548

Query: 479 LFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                V +  E E+  S+  L      +P +++        + L  YLY+LA+ F   + 
Sbjct: 549 AKETEVTLEHEKEWKLSKCIL-----RFPEILQKILEDLLLHTLCDYLYELATTFTEFYD 603

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     + R       K+ M RL L  A A+++  G +I+G++   +M
Sbjct: 604 NCYCVEKDRQT-GQIIKVNMSRLLLCDAAAAVMAKGFDILGLKPVQKM 650


>gi|299537113|ref|ZP_07050416.1| arginyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
 gi|298727354|gb|EFI67926.1| arginyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
          Length = 557

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 251/598 (41%), Gaps = 110/598 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++      L++     P  IA  I ++I  D  ++ V   G G++N++
Sbjct: 25  LLEKPKSLELGDVAF-PCFTLAKVWKKSPQNIAAHIASQINHD-SIERVQAVG-GYVNIF 81

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L    + +++L  I+    +YG      GT V ++F S N   P  +GH R  V+G+ LA
Sbjct: 82  LDQQKVTQQVLRKILRDKQQYGTTPTKMGTVV-LDFSSPNIAKPFSMGHLRSTVIGNALA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++   +GY+  R  ++ D G Q   L ++   W  +QA+    S  P      +Y+K   
Sbjct: 141 NIAEKNGYQAIRINHLGDWGTQFGKLIVAYQLWGDKQAI----SASPIEELLKIYVKF-- 194

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDD--------LKALNIQHDIFI 260
            E A++  +  LN         ++D +   QA+ +  RD          + L I  D F 
Sbjct: 195 HEEAEQDPT--LNEQARAAFKALEDGNEEAQALWQWFRDVSFVEFQTIYELLGIHFDAFT 252

Query: 261 SEDDFHRGDPSPIRDIIDN---LARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            E  ++   PS + ++ +    +A +G YV E    PP       C +            
Sbjct: 253 GEAFYNDKMPSVVTELKEKGLLVASEGAYVVEMEEMPP-------CLIK----------- 294

Query: 317 GDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
                    K+DG+  Y   DLA   Y +  Y+     M YV+G++ S + K+L  V   
Sbjct: 295 ---------KTDGATLYATRDLAAALYRQQHYQP--QKMFYVVGNEQSLHFKQLFQVIEK 343

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +    A+ N+       + +DG   KMS R G  + L  V+ E  + + R M   +KN  
Sbjct: 344 MGYPWAK-NLQHVSFGMMLKDGK--KMSTRKGKVVLLADVLAEAITTAQRNMG--QKNPS 398

Query: 434 LLDFD------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQ 467
           L + +            F  VK     +  F              YVQY YAR  SI  +
Sbjct: 399 LPNKEQVAKQVGVGAVIFNDVKSYRLNDIEFSIEQMMNFEGETGPYVQYTYARICSILDK 458

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           AK    D+ F        P           +I+ L ++P+ +  A    +P ++A Y   
Sbjct: 459 AKAPTQDILFKSLGEQAWP-----------MILLLEQFPKTVAMAFEQADPSQIAKYALQ 507

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA +F+ +++  +       + A++ +    RL L  +VA ++   L ++G+ESP  M
Sbjct: 508 LARLFNKYYAQYK-------ILADDEQ-QASRLALCQSVAIVLKESLALLGIESPENM 557


>gi|153954173|ref|YP_001394938.1| arginyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854782|ref|YP_002471904.1| hypothetical protein CKR_1439 [Clostridium kluyveri NBRC 12016]
 gi|189083529|sp|A5N8F9|SYR_CLOK5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782955|sp|B9E1W5|SYR_CLOK1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146347054|gb|EDK33590.1| ArgS [Clostridium kluyveri DSM 555]
 gi|219568506|dbj|BAH06490.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 566

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 230/543 (42%), Gaps = 98/543 (18%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    +    L  I++ G  YG + +G+G  V +E+ S N   P HVGH     +
Sbjct: 77  YVNFFVDKKIFTEYTLKEILLKGDSYGSSDMGEGKNVVVEYSSPNIAKPFHVGHLFSTSI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G+ L  ++ F GY  TR  ++ D G Q   L ++ + R+  A   N   + E     +Y+
Sbjct: 137 GNALYKMINFQGYNCTRINHLGDWGTQFGKL-IAAYNRWCNAEELNRDPIKE--LLRIYV 193

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIRD-DLKALNIQHDIFISED 263
           K    E A+K  S  LN     +   ++D S +   + K  +D  L+     +D+   + 
Sbjct: 194 KF--HEEAEKDPS--LNEEGRMYFKKLEDGSEEEIKLWKKFKDLSLREFKKVYDLLKVDF 249

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDD 319
           D + G+ S   D +D +  +                    +D+K LL  S     ++ D+
Sbjct: 250 DSYAGE-SFYTDKMDAVVEE--------------------IDKKGLLVESNGAKVVLLDE 288

Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
            + P   + KSDG+  Y   DLA   Y K  Y+  F   IYV+G D S + K++      
Sbjct: 289 YNIPPCIVKKSDGTTIYATRDLAAAIYRKKTYD--FYKSIYVVGLDQSLHFKQVFTTLKL 346

Query: 374 VSEKKAQINVLLCE-----LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
           + +  A      C+     LVR        K+S R GD I L  ++++            
Sbjct: 347 MGKDWADS----CKHVGFGLVRFANK----KLSTRKGDVIFLEELLNKSVERTLEIINEK 398

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCR 462
                        +G  +V F  L     + + FD+ ++   + +  P  YVQY+YAR +
Sbjct: 399 NPKLENKEEAAKKIGIGAVIFTYLKNNREKDIVFDWNEMLSFEGETGP--YVQYSYARGK 456

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R++++   D        N I         E +L+  L  + + I NA    EP+ + 
Sbjct: 457 SILRKSEEASYD-------ENQIDYSKLGSKEEFELVKILENFNKSIINAINRLEPFIVT 509

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+ D+A  F+  ++          + A +  +   RL LV     ++ +GLN++G+E  
Sbjct: 510 RYVIDVAKAFNKFYNAHS------IMNAADENIKKARLYLVKCTCQVLKNGLNLMGIEVV 563

Query: 583 NEM 585
            +M
Sbjct: 564 EKM 566


>gi|218673265|ref|ZP_03522934.1| arginyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 106

 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/107 (44%), Positives = 78/107 (72%), Gaps = 3/107 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1   MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI 105
            +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+S+
Sbjct: 60  SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASM 106


>gi|325201801|gb|ADY97255.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 572

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHA-ALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K  G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         
Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           +          + +DG P K   R+GD + L  ++ E                       
Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAGK 418

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A    
Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F
Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
              +      P L+   A+       RLQL       +  GL+++G++
Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567


>gi|68475091|ref|XP_718431.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
 gi|68475632|ref|XP_718164.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
 gi|46439920|gb|EAK99232.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
 gi|46440196|gb|EAK99505.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
          Length = 643

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 223/548 (40%), Gaps = 83/548 (15%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  Y + + L   ++  ++    +YG   +G G K  +EF S N   P H GH R  ++
Sbjct: 129 FLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 188

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203
           G  +++L    G++VTR  Y+ D G Q   LA+  F RY      ++S L   P  +   
Sbjct: 189 GGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FERY-----GDESKLASDPINHLFE 242

Query: 204 VYLK---HVGKELAD---KYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRD-DLKALNI 254
           VY+K    V KE ++   +  +E ++  E  EK +    +   +   + + D D  AL I
Sbjct: 243 VYVKINQDVTKETSEATGETPAETIDASEQDEKKIQSSTNEEARRFFRRMEDGDESALKI 302

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK-------C 302
                     + R     I   +D   R    Y     E  +P  K K   K        
Sbjct: 303 ----------WARFRDLSIEKYVDTYGRLNIKYDVYSGESQVPQEKMKEATKLFEDKGLI 352

Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
           D+DR   L   T     + + L+ KSDG+  Y   D+     +YE   FD MIYV+ +  
Sbjct: 353 DIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQ 412

Query: 361 S---------------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                            +   LE V       +S +K  + V L  +++  ++ M   M 
Sbjct: 413 DLHCAQFFEILKQMGFEWAHNLEHVNFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVMQ 471

Query: 402 KRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYA 457
           K    +  +     + D +G  +V    +  K     +F + ++   +    P  Y+QYA
Sbjct: 472 KNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQYA 529

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           ++R  S+ R++     +L+   F   V P  S        L   LA+YP VI+ A    E
Sbjct: 530 HSRLCSMQRKSGISIEELEHANFDLLVEPCAS-------ALARTLAQYPDVIKKAVKGLE 582

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  YL+ +  +    +        + +V    + + + RL L  A   +IN+G+ ++
Sbjct: 583 PSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKDVAIARLALYEAARQVINNGMTLL 635

Query: 578 GVESPNEM 585
           G+   N M
Sbjct: 636 GLTPVNRM 643


>gi|294614205|ref|ZP_06694124.1| arginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291592864|gb|EFF24454.1| arginyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 563

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 138/592 (23%), Positives = 258/592 (43%), Gaps = 94/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A   F 
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKAG--FV 467

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            L+   +  N        D +  +++  + +YP  + +A    EP  +A +   LA  F+
Sbjct: 468 PLETADYALN--------DDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLAQAFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 520 KYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|254577347|ref|XP_002494660.1| ZYRO0A06710p [Zygosaccharomyces rouxii]
 gi|238937549|emb|CAR25727.1| ZYRO0A06710p [Zygosaccharomyces rouxii]
          Length = 646

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 130/583 (22%), Positives = 224/583 (38%), Gaps = 100/583 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIE 111
           L R  G++P  IA+    +      + +V   G  F+  + +P +L   ++  I+    +
Sbjct: 114 LVRQKGINPREIAQEWAEKFPQGELISNVEANGP-FVQFFFNPQFLFHTVVPDILTRTED 172

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG     +  KV IEF S N   P H GH R  ++G  L++L    G+EV R  Y+ D G
Sbjct: 173 YGACKYVENKKVLIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKCGWEVIRMNYLGDWG 232

Query: 172 AQINTLAL--------------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            Q   LA+                     V+ R  + +      LPE        +   K
Sbjct: 233 KQFGILAVGYERYGDEKKLAEDPIDHLFQVYVRVNKDIEQESDSLPESESTDGQSRAYFK 292

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + D   + +  + + + L I K     A           LNI +D++  E    +    
Sbjct: 293 RMEDGDPAAIKLWQKFRELSIEKYIGTYA----------RLNIHYDVYSGESQVSKESME 342

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGS 330
               + D    +G V+                +DR   L   T     + + ++ KSDG+
Sbjct: 343 KALKLYD---EKGLVH----------------IDRGAKLIDMTRFNKKLGKVIVQKSDGT 383

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG------------YVKRLEAV---- 370
             Y   D+     +Y +  FD MIYV+ S    H+             + K L  V    
Sbjct: 384 TLYLTRDIGAAIDRYNKYHFDKMIYVIASQQDLHTAQFFELLKQMGFEWAKNLHHVNFGM 443

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMML 427
              +S +K  + V L  ++   +D M   M K    +  + +   V D VG  +V    +
Sbjct: 444 VQGMSTRKGTV-VFLNNILEETKDNMHEVMKKNEVKYAQVENPDEVADLVGISAVMIQDM 502

Query: 428 WRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPR 482
             K     +F + ++   +    P  Y+QYA++R RS+ R   DI      + DF L   
Sbjct: 503 QGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSMERNVPDITVADMKNADFKLLQ- 559

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    + + + L+  L++YP V+ NA    EP  +  YL+ L       +      
Sbjct: 560 ---------EPAAIALVRLLSQYPDVLRNALKTHEPTTVVTYLFKLTHQVSSCYD----- 605

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + +V    ++L  +RL L  A   ++ +G+ ++G+     M
Sbjct: 606 --VLWVAGQTKELATVRLALYAATRQVLFNGMKLLGLTPVERM 646


>gi|191638719|ref|YP_001987885.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Lactobacillus casei BL23]
 gi|239632092|ref|ZP_04675123.1| arginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066773|ref|YP_003788796.1| arginyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|190713021|emb|CAQ67027.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Lactobacillus casei BL23]
 gi|239526557|gb|EEQ65558.1| arginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439180|gb|ADK18946.1| Arginyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|327382760|gb|AEA54236.1| Arginyl-tRNA synthetase 1 [Lactobacillus casei LC2W]
 gi|327385947|gb|AEA57421.1| Arginyl-tRNA synthetase 1 [Lactobacillus casei BD-II]
          Length = 560

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 250/595 (42%), Gaps = 99/595 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           + +IE P+    G  +      L++ +   P  IA  +V +I + P  + V   G G++N
Sbjct: 25  KSLIETPKSSDLGDYAF-PTFSLAKIMHRAPKMIASDLVGQIDVTP-FEQVKAVG-GYVN 81

Query: 91  LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            YL   S+   +L  I  +G  YG   IG G  V I+  S N   PM +GH R  V+G+ 
Sbjct: 82  FYLDKISFAHDVLKVIAQAGEHYGDANIGSGN-VPIDMSSPNIAKPMSMGHLRSTVIGNA 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKH 208
           LA++++  GY   +  ++ D G Q   L ++   W  + A+  +         P   L H
Sbjct: 141 LANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWGSEDAVKAD---------PIKNLLH 191

Query: 209 VGKELADKYSSE-LLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDD 264
              E  +K  +   L+     W   ++D   +A  + +  R   L   N  + I   + D
Sbjct: 192 YYVEFHEKAEANPELDDEARAWFKRLEDGDEEAIALWRWFRTVSLAEFNRIYKILGVDFD 251

Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGDDV 320
            + G+      + D++  L  +  +          KT+Q  ++ D         ++    
Sbjct: 252 SYNGEAFYNDKMADVVKRLEDKHLL----------KTSQGAEIVDLSAYNLNPALIK--- 298

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--------- 370
                KSDG+  Y   DLA    + E   F   +YV+G++   + ++L+AV         
Sbjct: 299 -----KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYDWA 353

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHV 413
                            +S +K   N++L E   + RD + +   +++++  D      V
Sbjct: 354 NDIHHIPFGLITANGKKLSTRKG--NIILLE--NVLRDAVGLAKQQIAEKHPDLPNADKV 409

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             EVG  +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI R+A  
Sbjct: 410 AHEVGVGAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARANSILRKAA- 464

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           I P            P+ +  D +   ++  L +YP ++  A    EP  +A Y   LA 
Sbjct: 465 IDP-----------APEVALSDPAAWDVLRALGDYPSMVLRAAKEYEPSVIAKYALRLAK 513

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+ ++++ +       V   + +L   RL +V A   ++ + L ++GV +P EM
Sbjct: 514 AFNKYYANVK-------VLVEDSELPA-RLAMVKATTQVLTNALQLLGVGAPEEM 560


>gi|116495209|ref|YP_806943.1| arginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116105359|gb|ABJ70501.1| arginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 560

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 250/595 (42%), Gaps = 99/595 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           + +IE P+    G  +      L++ +   P  IA  +V +I + P  + V   G G++N
Sbjct: 25  KSLIETPKSSDLGDYAF-PTFSLAKIMHRAPKMIASDLVGQIDVTP-FEKVKAVG-GYVN 81

Query: 91  LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            YL   S+   +L  I  +G  YG   IG G  V I+  S N   PM +GH R  V+G+ 
Sbjct: 82  FYLDKISFAHDVLKVIAQAGEHYGDANIGSGN-VPIDMSSPNIAKPMSMGHLRSTVIGNA 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKH 208
           LA++++  GY   +  ++ D G Q   L ++   W  + A+  +         P   L H
Sbjct: 141 LANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWGSEDAVKAD---------PIKNLLH 191

Query: 209 VGKELADKYSSE-LLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDD 264
              E  +K  +   L+     W   ++D   +A  + +  R   L   N  + I   + D
Sbjct: 192 YYVEFHEKAEANPELDDEARAWFKRLEDGDEEAIALWRWFRTVSLAEFNRIYKILGVDFD 251

Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGDDV 320
            + G+      + D++  L  +  +          KT+Q  ++ D         ++    
Sbjct: 252 SYNGEAFYNDKMADVVKRLEDKHLL----------KTSQGAEIVDLSAYNLNPALIK--- 298

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--------- 370
                KSDG+  Y   DLA    + E   F   +YV+G++   + ++L+AV         
Sbjct: 299 -----KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYDWA 353

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHV 413
                            +S +K   N++L E   + RD + +   +++++  D      V
Sbjct: 354 NDIHHIPFGLITANGKKLSTRKG--NIILLE--NVLRDAVGLAKQQIAEKHPDLPNADKV 409

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             EVG  +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI R+A  
Sbjct: 410 AHEVGVGAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARANSILRKAA- 464

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           I P            P+ +  D +   ++  L +YP ++  A    EP  +A Y   LA 
Sbjct: 465 IDP-----------APEVALSDPAAWDVLRALGDYPSMVLRAAKEYEPSVIAKYALRLAK 513

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+ ++++ +       V   + +L   RL +V A   ++ + L ++GV +P EM
Sbjct: 514 AFNKYYANVK-------VLVEDSELPA-RLAMVKATTQVLTNALQLLGVGAPEEM 560


>gi|301053706|ref|YP_003791917.1| arginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300375875|gb|ADK04779.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 562

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 138/621 (22%), Positives = 254/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    D     + ++  +      V  +VG+ +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P VIE A    EP  ++ Y+ D+A +F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQLFNKYYGN------VRILDENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|160935632|ref|ZP_02083007.1| hypothetical protein CLOBOL_00522 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441376|gb|EDP19086.1| hypothetical protein CLOBOL_00522 [Clostridium bolteae ATCC
           BAA-613]
          Length = 595

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 137/610 (22%), Positives = 258/610 (42%), Gaps = 99/610 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK----G 87
           ++  RP  C +     N AM  ++     P+ IA  +V  + +      VF   +    G
Sbjct: 29  VLSNRPDLCEY---QCNGAMAAAKVYKKKPIDIANQVVEHL-VSGGSHPVFSEAEAVMPG 84

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL LS ++L +  +  +    + G     K   V +++  AN   P+HVGH R A++G
Sbjct: 85  FINLKLSEAFLAE-YTGFMAQSDKLGLEAPEKPETVIVDYGGANVAKPLHVGHLRAAIIG 143

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203
           +++  +  F G+ +  + ++ D G Q+  +   +  R  + +Y ++S   EG +P     
Sbjct: 144 ESIKRMGRFLGHHMIGDVHLGDWGLQMGLIIEELRDRKPELVYFDES--FEGPFPQEAPF 201

Query: 204 -------VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-----VQAMMKIIRDDLKA 251
                  +Y     K  AD+   E  +   +  L + + Y+      Q +M +   DLK 
Sbjct: 202 TISELEEIYPAASAKSKADEVFKERAH---QATLKLQRGYAPYRAIWQHIMAVSVADLKK 258

Query: 252 ----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMD 305
               LN++ D++  E D    +P  I D+I  L  +G  +E  G L    ++     D D
Sbjct: 259 NYANLNVEFDLWKGESD---AEPY-IGDMIQMLVDKGLAHESQGALVVDVAQ-----DTD 309

Query: 306 RKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHS 361
            K++             P L  KSDG+  Y  +DLA    + E+ F  D  IYV+     
Sbjct: 310 TKEI------------PPCLVRKSDGASLYATSDLATI-VEREQDFKPDRYIYVVDKRQG 356

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            + +++  VA      K    ++      +  +DG P K   R G  + L  +++E+   
Sbjct: 357 MHFEQVFRVAKKAGIVKEDTPMIFLGFGTMNGKDGKPFKT--REGGVMRLEKLIEEINEA 414

Query: 421 SVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQ 455
             + +M  R  SE           L    +  +  Q+ ++ VF              Y+ 
Sbjct: 415 VYQRIMENRTVSEDEARSTAAVVGLAALKYGDLSNQAAKDYVFDIERFTSFEGNTGPYIL 474

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y   R +SI  + ++    +  D   + ++       +SE  L++ LA Y  V+EN+   
Sbjct: 475 YTIVRIKSIIAKYRENGGQVSQDAVEKKILACAG---SSEKALMLMLARYNEVLENSFAE 531

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+K+  Y+Y+LA+ F+  +     + ++   +   RK +   + L+     ++ + + 
Sbjct: 532 TAPHKICQYIYELANAFNSFY----HDTKILAEEDEARKESY--IGLISLTRRVLEACIG 585

Query: 576 IIGVESPNEM 585
           ++G+E+P  M
Sbjct: 586 LLGIEAPERM 595


>gi|238879357|gb|EEQ42995.1| arginyl-tRNA synthetase [Candida albicans WO-1]
          Length = 622

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 223/548 (40%), Gaps = 83/548 (15%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  Y + + L   ++  ++    +YG   +G G K  +EF S N   P H GH R  ++
Sbjct: 108 FLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 167

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203
           G  +++L    G++VTR  Y+ D G Q   LA+  F RY      ++S L   P  +   
Sbjct: 168 GGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FERY-----GDESKLASDPINHLFE 221

Query: 204 VYLK---HVGKELAD---KYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRD-DLKALNI 254
           VY+K    V KE ++   +  +E ++  E  EK +    +   +   + + D D  AL I
Sbjct: 222 VYVKINQDVTKETSEATGETPAETIDASEQDEKKIQSSTNEEARRFFRRMEDGDESALKI 281

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK-------C 302
                     + R     I   +D   R    Y     E  +P  K K   K        
Sbjct: 282 ----------WARFRDLSIEKYVDTYGRLNIKYDVYSGESQVPQEKMKEATKLFEDKGLI 331

Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
           D+DR   L   T     + + L+ KSDG+  Y   D+     +YE   FD MIYV+ +  
Sbjct: 332 DIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQ 391

Query: 361 S---------------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                            +   LE V       +S +K  + V L  +++  ++ M   M 
Sbjct: 392 DLHCAQFFEILKQMGFEWAHNLEHVNFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVMQ 450

Query: 402 KRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYA 457
           K    +  +     + D +G  +V    +  K     +F + ++   +    P  Y+QYA
Sbjct: 451 KNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQYA 508

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           ++R  S+ R++     +L+   F   V P  S        L   LA+YP VI+ A    E
Sbjct: 509 HSRLCSMQRKSGISIEELEHANFDLLVEPCAS-------ALARTLAQYPDVIKKAVKGLE 561

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  YL+ +  +    +        + +V    + + + RL L  A   +IN+G+ ++
Sbjct: 562 PSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKDVAIARLALYEAARQVINNGMTLL 614

Query: 578 GVESPNEM 585
           G+   N M
Sbjct: 615 GLTPVNRM 622


>gi|309803439|ref|ZP_07697533.1| arginine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164448|gb|EFO66701.1| arginine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 558

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 252/601 (41%), Gaps = 115/601 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
            DD +  L LKSDG+  Y   DLA   Y K +Y+  F   +YV G++ SG+ K+L+ V  
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410
            +     Q ++       + ++G   K+S R G+ + L                      
Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400

Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI
Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     D    L            D     +   +A++P +I+ A    EP  +A Y
Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P E
Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557

Query: 585 M 585
           M
Sbjct: 558 M 558


>gi|302553259|ref|ZP_07305601.1| arginyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470877|gb|EFL33970.1| arginyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 585

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 133/600 (22%), Positives = 232/600 (38%), Gaps = 114/600 (19%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A  +V  +     +  V ++G GF+N+ ++   + + L++
Sbjct: 41  FQANGILALAKKEKANPRELATQVVGNVVSGDVIKDVEVSGPGFLNITVADRAIIENLAA 100

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
               G   G  L        +++   N    MHVGH R AV+GD L  ++ F+G +    
Sbjct: 101 RHADGERLGVPLKENAGITVVDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFTGEKTIGR 160

Query: 165 YYINDAGAQINTLALSVF------------------------WRYQQALYNNDSDLPEGY 200
           ++I D G Q   L   +F                        ++  +AL++ D +  E  
Sbjct: 161 HHIGDWGTQFGMLIQYLFEHPGELAPAADVDGEQAMSNLNRVYKASRALFDADEEFKERA 220

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
              V    V  +  DK + EL       W   V +  V       + D++   I+ +  +
Sbjct: 221 RKRV----VALQSGDKETLEL-------WQQFVDESKVYFYSVFEKLDME---IRDEEIV 266

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            E  ++ G P   R     L  +G     EG L                 + F      D
Sbjct: 267 GESAYNEGMPETAR----LLEEKGVAVRSEGALV----------------VFFDEIRGKD 306

Query: 319 DVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG---SDHSGYVKRLEAVAA 372
           D   PL+  K+DG + Y A+DL   + + ++     ++YV+    S H   V      A 
Sbjct: 307 DQPVPLIVQKADGGFGYAASDLTAIRNRVFDLKATTLLYVVDVRQSLHFRMVFETARRAG 366

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
            +SE     N+    +  L  DG P K   R G+ + L  ++DE                
Sbjct: 367 WLSEDVTAHNMGYGTV--LGADGKPFKT--REGETVRLEDLLDEAVQRAAEVVREKAQDL 422

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI 
Sbjct: 423 TEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSIL 481

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A +           + V   E E   +E  L +HL  +   +  A     P+KLA YL
Sbjct: 482 RKAGET----------KAVAHPELELAPAERALGLHLDAFGDTVFEAAAEYAPHKLAAYL 531

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y LAS++   +       +   ++A   +    RL L    A  ++ G+ ++G+ +P  +
Sbjct: 532 YQLASLYTTFYD------KCPVLKAETPEQIENRLFLCDVTARTLHRGMGLLGIRTPERL 585


>gi|312870867|ref|ZP_07730972.1| arginine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311093557|gb|EFQ51896.1| arginine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 558

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            DD +  L LKSDG+  Y   DL A    K E  F   +YV G++ SG+ K+L+ V   +
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 345

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410
                Q ++       + ++G   K+S R G+ + L                        
Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466
              V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI R
Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     D    L            D     +   +A++P +I+ A    EP  +A Y  
Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P EM
Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558


>gi|309806624|ref|ZP_07700620.1| arginine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166929|gb|EFO69112.1| arginine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 553

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 20  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 76

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 77  IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 135

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 136 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 195

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 196 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 243

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 244 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 281

Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            DD +  L LKSDG+  Y   DL A    K E  F   +YV G++ SG+ K+L+ V   +
Sbjct: 282 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 340

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410
                Q ++       + ++G   K+S R G+ + L                        
Sbjct: 341 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 397

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466
              V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI R
Sbjct: 398 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 453

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     D    L            D     +   +A++P +I+ A    EP  +A Y  
Sbjct: 454 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 502

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P EM
Sbjct: 503 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 553


>gi|312130430|ref|YP_003997770.1| arginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311906976|gb|ADQ17417.1| arginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 586

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 141/632 (22%), Positives = 251/632 (39%), Gaps = 144/632 (22%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR-IKIDPDVDSVFIAGKGF 88
           D++ ++  R    GH  T     L +     P  I +L+    I+  P V S  +  +GF
Sbjct: 23  DKVTLQPTRKDFEGHY-TYVFFGLVKLARKSPAEIGQLLGDYLIQNSPYVLSYTVV-QGF 80

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL L      ++       G++ G+N       V +E+ S N   P+H+GH R   +G 
Sbjct: 81  LNLTLKDEAWIQVFR-----GVKEGQNPEASKGNVLVEYSSPNTNKPLHLGHLRNNFLGY 135

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-- 206
           ++A ++  +GYEVT+   +ND G  I   ++  + RY        S L   +  G Y   
Sbjct: 136 SVAEILKEAGYEVTKACLVNDRGIHI-CKSMVAYQRYGNGETPASSGLKGDHLVGKYYVE 194

Query: 207 --KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
             KH  KE+ +  +  +     +K  PI+    V+A   +++                  
Sbjct: 195 FDKHYKKEIEEWVAEGVSEEEAKKTAPIL----VEAQEMLVK------------------ 232

Query: 265 FHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--- 320
           +  GD     +II+   +  G+VYEG     K   T   + D+      + ++G D+   
Sbjct: 233 WENGDA----EIIELWKKLNGWVYEGFDFTYK---TIGVNFDKTYYESDTYLLGKDIVEE 285

Query: 321 -------------------------DRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIY 354
                                     + +L+ DG+  Y   DL     K++    +  I+
Sbjct: 286 GLAKGVFYKKEDNSVWIDLTDEGLDHKLVLRGDGTSVYITQDLGTTDLKFQDFHSEKSIW 345

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM-----------PIKMSKR 403
           V+G++   + K L A+              L  L R Y DG+             KM  R
Sbjct: 346 VVGNEQDYHFKVLFAI--------------LKRLGRPYADGLYHLSYGMVDLPSGKMKSR 391

Query: 404 AGDFI-----------TLRHVVDEVGS----DSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            G  +           T + + +E G        +   L+R  + L    +  +K + K+
Sbjct: 392 EGTVVDADELVSDMIATSKSITEEKGKTEGFSEGQLEELYRMVA-LGALKYYLLKVEPKK 450

Query: 449 NPVF--------------YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDT 493
             +F              ++QY +AR +SI R++ KD FP       P ++    +  + 
Sbjct: 451 RMLFNPEESIDFQGNTGPFIQYTHARIKSILRKSGKDQFP------MPADI----TNVNA 500

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E+++I  L ++ ++I+ A     P  +A Y+Y+LA  F+  +S      R   +   N 
Sbjct: 501 EEIEVIFLLKDFRKIIDAAAAEYSPAVIANYVYELAKTFNVFYS------RHSVLNEENE 554

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L   RL L+  VA +I  G+ ++G+E P +M
Sbjct: 555 VLKNFRLSLIEQVAEVIKKGMKLLGIEVPEKM 586


>gi|262276201|ref|ZP_06054010.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220009|gb|EEY71325.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 576

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 135/603 (22%), Positives = 236/603 (39%), Gaps = 123/603 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  +++D       IAG GFIN++LS  +L +  
Sbjct: 37  GDYQANGIMGVAKKLGCNPREFAQKVLDVLELDGMASKTEIAGPGFINIFLSSEWLAEQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + + S     R  + +  K NI  ++ + N    MHVGH R  ++GD +   + F G+ 
Sbjct: 97  DAALASD----RLGVAEAEKQNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152

Query: 161 VTREYYINDAGAQINTLALSV-------------------FWRYQQALYNNDSDLPEGYY 201
           V R  ++ D G Q   L  ++                   F+R  + LY+ D +  +   
Sbjct: 153 VIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSDIEGFYRESKKLYDEDEEFAKTAR 212

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             V     G E           + +EKW  +VK    Q      R     LN+     ++
Sbjct: 213 NYVVRLQSGDE-----------YCKEKWQQLVKITLEQNQRNYDR-----LNVS----LT 252

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGD 318
           + D      S   D++           GI+   K+K     D D   ++F        G+
Sbjct: 253 DKDVM--GESMYNDML----------AGIVEDLKAKGLAVED-DGAMVVFLDEYKNKDGE 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370
            +   + K DG + Y   D+A  K +YE    D ++Y + S    +       V++   V
Sbjct: 300 PMGVIIQKRDGGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              +S +     ++L       +DG P K   RAG  + L  ++DE  + + +  ++  K
Sbjct: 360 PETMSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEARANK--LIEEK 409

Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462
           N EL           +     K  + SK                  N   Y+QYAY R  
Sbjct: 410 NPELSAEEKANIATTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SIF +A      +D D     +I  E +    E  L+  L ++   ++      +P+ + 
Sbjct: 470 SIFNKA-----GIDADNIEGKIIVAEDK----EKALVSKLLQFEEAVDGVAREGQPHIMC 520

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++LA  F   +    E   +   +   ++    RL+L    A  I  GL ++G+++ 
Sbjct: 521 GYLFELAGTFSSFY----EACPILNAEGETKQ---SRLKLAALTAKTIKQGLELLGIKTL 573

Query: 583 NEM 585
             M
Sbjct: 574 ERM 576


>gi|69246787|ref|ZP_00604116.1| Arginyl-tRNA synthetase, class Ic [Enterococcus faecium DO]
 gi|257878540|ref|ZP_05658193.1| arginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883175|ref|ZP_05662828.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257889263|ref|ZP_05668916.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260560126|ref|ZP_05832304.1| arginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293560155|ref|ZP_06676658.1| arginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294620321|ref|ZP_06699637.1| arginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|314937490|ref|ZP_07844823.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942149|ref|ZP_07849003.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947511|ref|ZP_07850926.1| arginyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951498|ref|ZP_07854547.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992588|ref|ZP_07858006.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995477|ref|ZP_07860577.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195078|gb|EAN09539.1| Arginyl-tRNA synthetase, class Ic [Enterococcus faecium DO]
 gi|257812768|gb|EEV41526.1| arginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818833|gb|EEV46161.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257825623|gb|EEV52249.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260073961|gb|EEW62285.1| arginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291593433|gb|EFF24991.1| arginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291605888|gb|EFF35319.1| arginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590311|gb|EFR69156.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592880|gb|EFR71725.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596338|gb|EFR75183.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599072|gb|EFR77917.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313643131|gb|EFS07711.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313646061|gb|EFS10641.1| arginyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 563

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D +  +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|293553971|ref|ZP_06674575.1| arginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601897|gb|EFF32145.1| arginyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 563

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D +  +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|261208154|ref|ZP_05922828.1| arginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566203|ref|ZP_06446636.1| arginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|260077588|gb|EEW65305.1| arginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161981|gb|EFD09848.1| arginyl-tRNA synthetase [Enterococcus faecium D344SRF]
          Length = 563

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D +  +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|325479660|gb|EGC82752.1| arginine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 565

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 241/595 (40%), Gaps = 98/595 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFIN 90
           +IE P     G  S      L++ +  +P  IA+ +   ++I+    V+S+      ++N
Sbjct: 27  LIEIPPQDNMGDFSF-PCFTLAKTMRKNPAIIAKDLAETLEIEGISKVESL----NAYLN 81

Query: 91  LYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            +L    +   IL+ I+    +YG++ IG+G    ++F S N   P H+GH R  V+GD 
Sbjct: 82  FFLDRDKFETGILNEILEKKEDYGKSNIGEGKTRVLDFSSVNIAKPFHIGHIRSTVIGDA 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L ++  F GYE     YI D G Q  T+  +        L+ +D  L E   P       
Sbjct: 142 LRNIQEFLGYETVASNYIGDYGTQFGTMIAAY------KLWGDDDKLREN--P------- 186

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD------IFISED 263
                     ELLN          KD   + MM+  R + K L    +       +  E 
Sbjct: 187 --------IKELLNLYVRYNDEASKD---EKMMENARKEFKNLESGEEEAVRLWSWFKEI 235

Query: 264 DFHRGDPS-PIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVG 317
            F   D    + DI  DN   + Y  E I    +       ++  K LL  S     +  
Sbjct: 236 SFSEFDRVYKLLDIDFDNYNGESYHSEFIPAVIE-------ELKEKNLLVESEGAYIIDL 288

Query: 318 DDVDRP---LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA-- 371
            D D P   ++KS+GS  Y   D+A     K    FD  +YV+ +  + + ++L+A+   
Sbjct: 289 SDYDLPPSIIIKSNGSSAYITRDIATAINRKKVYDFDENLYVVATQQNLHFQQLKAILEK 348

Query: 372 ---------------------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
                                  +S +K Q+ V L +++    D     M  R      +
Sbjct: 349 MGYDFYKDCIHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIDKTREIMEDRDSQIEDV 407

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V+F  L+    +   FD+ +V     E    YVQY YAR +S+ R+A  
Sbjct: 408 EETSRIVGIGAVKFQELYNNRIKDYVFDWDEVLNFDGETGP-YVQYTYARAKSVLRKAD- 465

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            F +     F +  I  + EF      L+  LA +  V+  A    EP  +  +  ++A 
Sbjct: 466 -FSETKTKDFTK--ISSDEEF-----ALVKSLANFKDVVIKACEKYEPSLITRHTTEIAK 517

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  ++  +       +  ++ +L   RL L +A + +I + L ++G+++  +M
Sbjct: 518 NFNKFYNACQ-------INVDDERLKEERLALTYATSIVIKTALGLLGIKTVEQM 565


>gi|225075056|ref|ZP_03718255.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens
           NRL30031/H210]
 gi|224953540|gb|EEG34749.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens
           NRL30031/H210]
          Length = 572

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/590 (21%), Positives = 238/590 (40%), Gaps = 78/590 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++   G    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQAAKNPDFGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 ++ ++D+L ++G   E       +K     +   K+        G+     + K
Sbjct: 262 ----DDLQPVVDDLVQKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 305

Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
             G + Y + DLA    +Y  G    D ++YV+    + + ++L   +         +  
Sbjct: 306 QGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGA 363

Query: 384 LLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
                   + +DG P K   R+GD + L  ++ E                          
Sbjct: 364 AFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGK 421

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A       
Sbjct: 422 TVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------ 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++F   
Sbjct: 475 EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRF 529

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      P L+   A        RLQL       +  GL ++G++  N M
Sbjct: 530 Y---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLELLGIDVLNVM 572


>gi|259501427|ref|ZP_05744329.1| arginine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190852|ref|ZP_07267106.1| arginyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|325911634|ref|ZP_08174042.1| arginine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329919661|ref|ZP_08276639.1| arginine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167176|gb|EEW51671.1| arginine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|325476620|gb|EGC79778.1| arginine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328937313|gb|EGG33737.1| arginine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 558

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            DD +  L LKSDG+  Y   DL A    K E  F   +YV G++ SG+ K+L+ V   +
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYNFAMSLYVAGNEQSGHFKQLKQVLGKM 345

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410
                Q ++       + ++G   K+S R G+ + L                        
Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466
              V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI R
Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     D    L            D     +   +A++P +I+ A    EP  +A Y  
Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P EM
Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558


>gi|296424987|ref|XP_002842025.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638282|emb|CAZ86216.1| unnamed protein product [Tuber melanosporum]
          Length = 633

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 138/588 (23%), Positives = 237/588 (40%), Gaps = 104/588 (17%)

Query: 51  MILSRPL----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSI 105
           +IL+ P     G +P  + +    +   +P V S   AG  F+  Y     L K +LSSI
Sbjct: 85  LILAAPRLRIPGKNPSELTKEWAEKFPENPYVRSPTAAGT-FLQFYFKKDVLSKLVLSSI 143

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
           +     YG    GKG +V +EF S N   P H GH R  ++G  L++L    G++V R  
Sbjct: 144 LSRKSAYGPIDTGKGKRVIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYESCGWDVIRMN 203

Query: 166 YINDAGAQINTLALSV--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-----LADKYS 218
           Y+ D G Q   L +    F   ++ L +  + L E Y     +    KE      A+K  
Sbjct: 204 YLGDWGKQFGILGVGYKRFGSEEKLLEDPINHLFEVYVAINKVVEQEKEAEKNKAAEKGE 263

Query: 219 SELLNFP---------------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            ++ N P                E+ + + K +   ++ K  +     LNI +D++  E 
Sbjct: 264 KQISNGPTDQEALEFFFKMEHGSEECIAMWKRFRELSIEK-YKATYSRLNISYDVYSGES 322

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +          +++ R G +    GI     S++     +D K     +  +G  V 
Sbjct: 323 QVSK----------ESMERAGEMMREMGI----SSESDGAIVVDFKP---HAKKLGKAV- 364

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---------- 370
             + K DG+  Y   D+     +YE+  FD MIYV+      ++++L  +          
Sbjct: 365 --VQKKDGTTLYLTRDIGAAMERYEKYKFDKMIYVVACQQDLHLQQLFMILKLLKLDWAD 422

Query: 371 ---------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVG 418
                       +S ++  + V L +++   RD M   M K    +  +     V D VG
Sbjct: 423 RLTHVNFGMVLGMSSRRGTV-VFLDDILADARDKMHEVMRKNEEKYKQVEDPEMVADVVG 481

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-- 475
             +V    +  K      FD  ++   +    P  Y+QYA++R  SI R++    P+L  
Sbjct: 482 RTAVMIQDMSGKRINNYTFDMARMTSFEGDTGP--YLQYAHSRLCSIQRKSGIPIPELLN 539

Query: 476 -DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            DF L   +            + LI  LA+YP V++N     EP  +  YL+ +  +   
Sbjct: 540 ADFSLLTED----------HAINLIRCLAQYPDVLQNTLKTLEPTTVVTYLFKMTHLLSS 589

Query: 535 HWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +   R   E PR          L+  R+ L  +   ++N+G+ ++G+
Sbjct: 590 SYDVLRVIGEEPR----------LSAARMALYESARQVLNNGMRLLGL 627


>gi|293567417|ref|ZP_06678764.1| arginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294620748|ref|ZP_06699955.1| arginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291589814|gb|EFF21615.1| arginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291599728|gb|EFF30738.1| arginyl-tRNA synthetase [Enterococcus faecium U0317]
          Length = 563

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMRHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D +  +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|256545516|ref|ZP_05472876.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398727|gb|EEU12344.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 566

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 134/584 (22%), Positives = 252/584 (43%), Gaps = 114/584 (19%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++ +  +P  IAE + + ++ID  V+ + +    ++N YL    +   +++ ++    +
Sbjct: 46  LAKTMRKNPKLIAEEVASSLEIDG-VEKI-VNENAYVNFYLDRQKVTNDVINEVIEKEDD 103

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG++ +GKG    +EF S N   P H+GH R  V+GD + ++  + GY VT   YI D G
Sbjct: 104 YGKSDMGKGINELVEFSSVNIAKPFHIGHIRSTVIGDVIRNIYEYLGYNVTASNYIGDYG 163

Query: 172 AQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFP 225
            Q   + A    W  ++A+   D D P      +Y+++       +E  +K   E  N  
Sbjct: 164 TQFGVMIAAYKLWGDKEAI---DKD-PINELLNLYVRYTKEEEDNEEYQEKARQEFKNLE 219

Query: 226 --EEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN- 279
             EE+ + +    KD S++   ++       L+I++D +  E    +  P+ + ++ +  
Sbjct: 220 DGEEEAMRLWQWFKDLSLREFDRV----YGMLDIKYDNYHGESYHSQWMPAALEELKEKN 275

Query: 280 -LARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            L      Y     E  LPP               +L +S              +GS  Y
Sbjct: 276 LLVESDGAYIVDLSEFNLPPS--------------MLIKS--------------NGSSAY 307

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE--LVR 390
              D+A    ++   G D  IY++GS    + ++L+ +   +  +     VL  +  +V 
Sbjct: 308 ITRDVATALYRHRTYGLDKNIYIVGSQQKLHFQQLKKILYLMGHEDVSEEVLHVQFGMVS 367

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFM 425
           L +D +   +S R G  + L  V+++                         VG  +V+F 
Sbjct: 368 L-KDQV---LSTRKGHVVFLEDVLNKTIEKTYSIMKDRDNQIENLDEAAKIVGIGAVKFQ 423

Query: 426 MLWRKNSELLD--FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFP 481
            L+  NS + D  FD+ ++   + +  P  YV Y YAR +S+ R+A K+ F  ++F+   
Sbjct: 424 ELY--NSRIKDYVFDWDELLNFEGETGP--YVHYTYARAKSVLRKAGKEEFGQMNFEKLN 479

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +           E  LI  L  +   I  A    EP  +A  + ++A  F+  ++  + 
Sbjct: 480 TD----------EEYSLIKALESFQDAIILAKNRLEPSVVARKVMEIAQKFNKFYNSTQ- 528

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +  ++ KL   RL L  A + +I +GL I+G+++  +M
Sbjct: 529 ------ILVDDEKLKEERLALTKATSIVIKNGLGILGIKTVEQM 566


>gi|116074027|ref|ZP_01471289.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069332|gb|EAU75084.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 595

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 241/599 (40%), Gaps = 104/599 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ DP    +     IAG GFINL + P  L
Sbjct: 45  GDFQANGALPLAKPLKQAPRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPEQL 104

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              ++S  +     G   +     V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 105 AAEVAS-RLGDPRLGVPAVENAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 163

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217
           + V R  ++ D G Q   L   +     +AL   D+ DL               +L   Y
Sbjct: 164 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALQTADAVDL--------------GDLVAFY 209

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIR 274
                 F +++     +  S   ++K+   D   LKA  +  D   S  +F +     I 
Sbjct: 210 REAKKRFDDDEAF---QSTSRDEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IY 259

Query: 275 DIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL----L 325
           D +D  L+ +G  +     P      +  ++    D  Q +F   + G D  +PL     
Sbjct: 260 DRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKD-GKPLPVIVQ 318

Query: 326 KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKK 378
           KSDG + Y   DLA  + ++       G   ++YV  +  + +   +  VA  A    + 
Sbjct: 319 KSDGGFNYATTDLAAIRYRFGAAPDGDGAKRVVYVTDAGQANHFAGVFQVAERAGWIPEG 378

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           +++  +   LV+   DG   K+  RAGD + LR ++DE                      
Sbjct: 379 SRLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRSRLSEEERSESK 435

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+
Sbjct: 436 EFIGHVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARK 494

Query: 468 AKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
             D+            V+  + +F +  E  L+  L ++  VI        P +L  YL+
Sbjct: 495 GGDL-----------EVLGAQLQFSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLF 543

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+ VF+  +        +  ++A+   L   RL L    A  + +GL ++G+ +   M
Sbjct: 544 ELSQVFNRFYDQ------VPVLKADPEALP-SRLALCRLTADTLKAGLGLLGIATLERM 595


>gi|254361175|ref|ZP_04977319.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153092666|gb|EDN73715.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 575

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 136/598 (22%), Positives = 234/598 (39%), Gaps = 114/598 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    ++   D + IAG GFIN++L+P +L +  
Sbjct: 37  GDYQANGAMGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENT 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +S  +  + +G       T V I++ S N    MHVGH R  ++GD +   +AF G  V 
Sbjct: 97  NS-SLQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G    DKY   +       W  +     V   M   +++   LN+       +D 
Sbjct: 215 VKLQSG----DKYCLTM-------WKKL-----VDITMHHNQENYNRLNV---TLTEKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320
                 +P + +I+ +L  +G   E                D   ++F        GD +
Sbjct: 256 MGESLYNPMLPEIVADLKAKGLAVED---------------DGALVVFLDEFKNKDGDPM 300

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG + Y   D+A  K +YE    D  +    S  + ++++    A  ++ K  
Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITRKAG 356

Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
            + +    E     + L +DG P K   R+G  + L+ ++DE                  
Sbjct: 357 YVPDSFSLEHPFFGMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLIAERSTELTA 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 EEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFAR 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A     ++D +    ++   E +    E  L V L ++   +        P+ L  YLY+
Sbjct: 474 A-----NIDENALSGSIQLNEPK----ERALAVKLLQFEEALNGVAKEGMPHILCQYLYE 524

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  F   +      P L   +         RL+L    A  +  GL+++G+++  +M
Sbjct: 525 LAGSFSSFY---EACPILNAEETTKNS----RLKLAALTAKTLKQGLDLLGIKTVEKM 575


>gi|291521118|emb|CBK79411.1| arginyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 561

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 224/540 (41%), Gaps = 95/540 (17%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           G++N Y+  +   + +     +  +YG +  GK   + I++ S N     HVGH R  ++
Sbjct: 76  GYLNFYVDKAQYAQQIIDKYNNTTDYGCSDQGKDKTICIDYSSPNVAKNFHVGHLRTTII 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY 205
           G++L  + +  GY+V R  ++ D G Q   L ++   W  ++A+   +  + E     +Y
Sbjct: 136 GNSLYKIFSKLGYKVVRINHLGDWGTQFGKLIVAYKKWGSREAV--EEKGIEE--LMDIY 191

Query: 206 LK-HVGKELADKYSSEL------LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQ 255
           +K H   E  D  + E       +    E+ L I    +D S++  M++       L ++
Sbjct: 192 VKFHEEAEKDDSLNDEARAWFLKMEQGNEEALEIWQWFRDISLKEFMRV----YNILGME 247

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRS 313
            D F  E  F+R   +   D+I  L   G + E  G +  P                   
Sbjct: 248 FDSFAGE-SFYRDKTA---DVIKRLTDDGLLKESQGAMIVPL------------------ 285

Query: 314 TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDH------- 360
               D+ D P   + K DGS  Y   DLA   Y K  Y   FD  +YV G +        
Sbjct: 286 ----DEYDMPPCIVAKKDGSSIYATRDLAAILYRKATY--NFDRCLYVTGLEQKLHFAQV 339

Query: 361 --------SGYVKRLEAVA-AAVSEKKAQI-----NVLLCE-LVRLYRDGMPIKMSKRAG 405
                   + Y K L  +    VS K  +I     NV+  E L+R   +     + ++  
Sbjct: 340 FKVIELMGNDYAKNLVHIPYGLVSLKSGKISSRKGNVIFAEDLLRESINKTTSIIEEKNP 399

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D      V  +VG  ++ F  L+ +  + + FD+ K+     E    YVQY YAR  S+ 
Sbjct: 400 DIPDKEEVAKQVGIGAIIFNDLYNQRIKDVIFDWNKLLNFDGETGP-YVQYTYARASSVL 458

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+  ++   +D+ L            D + + L+  +  YP+VI++A    EP  +A Y 
Sbjct: 459 RKIGEVPDTIDYTLLT----------DEASIGLLKEIERYPQVIKDAAERYEPSVIARYS 508

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLA  F+  +   + N     V+    K T  R  +V     II   L+++G++ P +M
Sbjct: 509 IDLAHAFNKFYHECQIN-----VEDKTTKYT--RTNVVKIARYIIKDALSLLGIQCPEQM 561


>gi|261252368|ref|ZP_05944941.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935759|gb|EEX91748.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 577

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 232/607 (38%), Gaps = 130/607 (21%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG +P   A+ ++  + ++       IAG GFIN++LS  +L K  
Sbjct: 37  GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLEGIASKTEIAGPGFINIFLSEEFLAKQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + +      G     + T V  ++ + N    MHVGH R  ++GD +   + F G++V 
Sbjct: 97  DAALAD-ARLGVTAEEQKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           R  +I D G Q   L                    L  F+R  + LY+ D +        
Sbjct: 155 RANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLYDEDEEFAVRARNY 214

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQH 256
           V     G    D+Y +E+       W  +V    VQ         + + RDD+   ++ +
Sbjct: 215 VVKLQSG----DEYCAEM-------WKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESMYN 263

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+           P     I+ +L +QG   E                D  Q++F     
Sbjct: 264 DML----------PG----IVADLKQQGLAQED---------------DGAQVVFLEEYK 294

Query: 317 ---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VK 365
              G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V+
Sbjct: 295 NKDGEAMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVR 354

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +   V   VS +     ++L       +DG P K   RAG  + L  ++DE         
Sbjct: 355 KAGYVPEEVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERATKLI 406

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             V   +V++  L +  +    FD+  +    + N   Y+QYAY
Sbjct: 407 ESKNPSLDAEEKSNIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAY 465

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R  SIF +A      +  D     +   E +    E  LI  L ++   +++     +P
Sbjct: 466 TRVSSIFAKA-----GISMDNLAGEIKVTEEK----EKALIAKLLQFEEAVQSVAREGQP 516

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + +  YL++LA  F   +           +   +  +   RL+L    A  I  GL+++G
Sbjct: 517 HIMCSYLFELAGQFSSFYEA------CPILNTEDESVKQSRLKLAALTAKTIKQGLSLLG 570

Query: 579 VESPNEM 585
           +E+   M
Sbjct: 571 IETLERM 577


>gi|227551770|ref|ZP_03981819.1| arginine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257887069|ref|ZP_05666722.1| arginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895634|ref|ZP_05675287.1| arginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898223|ref|ZP_05677876.1| arginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293377755|ref|ZP_06623944.1| arginine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227179075|gb|EEI60047.1| arginine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257823123|gb|EEV50055.1| arginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832199|gb|EEV58620.1| arginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836135|gb|EEV61209.1| arginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|292643755|gb|EFF61876.1| arginine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 563

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 258/596 (43%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+   + D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVQFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I++ L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVELLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDVVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D    +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDISWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|229495652|ref|ZP_04389381.1| arginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229317422|gb|EEN83326.1| arginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 603

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 137/620 (22%), Positives = 250/620 (40%), Gaps = 106/620 (17%)

Query: 30  DRIVIERPRDCAHGH--LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           D+I I++ R    GH  L     + LSR     P   A  I   +K +    + F   KG
Sbjct: 26  DQIQIQKTRAEFAGHYTLVVFPLLKLSRK---KPEETATEIGTSLKAEFPWITDFNVVKG 82

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+NL LS +   ++LS+I         ++  +   V +E+ S N   P+H+GH R  ++G
Sbjct: 83  FLNLSLSTALWLELLSAIDGDSAWGHTSVTEQSPLVMVEYSSPNTNKPLHLGHVRNNLLG 142

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY----NNDSDLPEGYYPG 203
           ++LA ++  +G  V +   +ND G  I    L+ + ++   +         D   G +  
Sbjct: 143 NSLARILTANGKRVVKTNIVNDRGIHICKSMLA-WQKWGNGITPESAGKKGDHLVGDFYV 201

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIV------------KDYSVQAMMKIIR----- 246
            + KH   E+AD  +  ++    E   P +             D  V A+ +++      
Sbjct: 202 AFDKHYKAEVADLMAQGMIKEEAEAKAPSMVEARDLLRRWEAGDEEVLALWRMMNQWVYD 261

Query: 247 ---DDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNL---ARQGYVYEGILPPPKSKTT 299
              +  + L +  D I+   + + +G    +R + + L      G V+            
Sbjct: 262 GFDETYRRLGVDFDKIYYESETYLKGKAEVLRGLDEGLFVKHEDGSVW------------ 309

Query: 300 QKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                        + +  D +D + LL+SDG+  Y   D+   K +YE    D MIYV+G
Sbjct: 310 -------------ADLTADGLDEKILLRSDGTSVYMTQDIGTAKMRYESYPIDQMIYVVG 356

Query: 358 SDHSGYVK----RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           ++   + K     L+ +  +  +     +  + EL     +G   KM  R G  +    +
Sbjct: 357 NEQEYHFKVLSILLDRLGFSFGKSLVHFSYGMVEL----PNG---KMKSREGTVVDADDL 409

Query: 414 VDE-------VGSDSVRFMMLWRKNSE-------LLDFDFCKVKEQSKENPVF------- 452
           +DE       +  ++ R  +L     +       L D  +  +K   ++N  F       
Sbjct: 410 MDEMIASARAIAQEAGRAALLPEDEMQEVARRVGLGDLKYFILKVDPRKNMTFNPEESVD 469

Query: 453 -------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
                  ++QY YAR RS+  +A+      +  L     +  ++     E+ LI  L+EY
Sbjct: 470 FNGNTASFIQYTYARIRSLVEKARVAGEAPEAPLTSEAAVRLDNAHSDREVALIRQLSEY 529

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++  A  +  P  +A Y+Y+L     G+ S   + P LR     +  +   RL +   
Sbjct: 530 PSIVAEAGKSFSPALIANYVYELVK---GYNSFYHDCPVLR---EEDDSIRHTRLYISRI 583

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA II   ++++G+E P  M
Sbjct: 584 VADIIARAMDLLGIEMPERM 603


>gi|28210674|ref|NP_781618.1| arginyl-tRNA synthetase [Clostridium tetani E88]
 gi|38372518|sp|Q896N5|SYR_CLOTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28203112|gb|AAO35555.1| arginyl-tRNA synthetase [Clostridium tetani E88]
          Length = 563

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 222/539 (41%), Gaps = 93/539 (17%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++  S   K ++  I+    +YG +  GKG K  IE+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKSIFSKNVIEKILEEKDKYGASNEGKGRKALIEYSSPNIAKPFHVGHLFSTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           G+ L  +  F GY+  R  ++ D G Q   L A    W  ++AL       P      +Y
Sbjct: 137 GNALYKIFTFEGYDCERLNHLGDWGTQFGKLIAAYKRWVDEEALEKE----PIKELLRIY 192

Query: 206 LKHVGKELADKYSSE--LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +K   +   D    E   L+F   K L   ++  V+   K     LK     + +   E 
Sbjct: 193 VKFHDEAEKDPALEEEGRLHF---KRLEDGEEEEVKLWKKFRELSLKEFEKVYHMLNVEF 249

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDD 319
           D + G+ S   D +D +  +                    +D K LL  S     ++ +D
Sbjct: 250 DSYAGE-SFYGDKMDAVVEE--------------------IDEKGLLVESNGAKVVMLED 288

Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
            + P   + KSDG+  Y   DLA   Y K  Y+  F   IYV+G + S + K++      
Sbjct: 289 YNMPPCIIKKSDGATIYATRDLATAIYRKKTYD--FYKSIYVVGLEQSLHFKQVFTTLKL 346

Query: 374 VSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           +    A     +   LVR        K+S R G+ I L  ++ E    ++   ++  KNS
Sbjct: 347 MGHDWADDCTHIGFGLVRF----TDRKLSTRKGEVIFLEDLLKESVDKTLE--IINEKNS 400

Query: 433 ELLDFD------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFR 466
           EL + +            F  +K   + + VF              YVQY+YAR +SI R
Sbjct: 401 ELENKEETAKKIGIGAVIFTYLKNNRERDIVFSWDEMLSFDGETGPYVQYSYARGKSILR 460

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++ +I  D+D+                 E +L+  L  + + I  A    EP  +  Y+ 
Sbjct: 461 KSGEIQGDVDYSKLN----------SKEEFELVKTLEGFNKSILQAIEKLEPSIVTRYVI 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++A  F+  ++H         + A + ++   R++LV +   +I + LN++G+E   +M
Sbjct: 511 EVAKAFNKFYNHN------SILNAEDEEIKKARIKLVESTCQVIKNALNLLGIEVVEKM 563


>gi|241760366|ref|ZP_04758461.1| arginine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319244|gb|EER55722.1| arginine--tRNA ligase [Neisseria flavescens SK114]
          Length = 572

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/594 (21%), Positives = 242/594 (40%), Gaps = 86/594 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++   G    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQAAKNPDFGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPDFLAQNIQT-ALNDARFGIAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323
                 ++ ++D+L ++G   E                D  +++F        G+     
Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378
           + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +        + K
Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAK 362

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           A+    +     + +DG P K   R+GD + L  ++ E                      
Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAA 417

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A   
Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG-- 474

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A++
Sbjct: 475 ----EWDTNEPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +      P L+   A        RLQL       +  GL ++G++  N M
Sbjct: 526 FSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLGLLGIDVLNVM 572


>gi|311896747|dbj|BAJ29155.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 587

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 129/591 (21%), Positives = 241/591 (40%), Gaps = 81/591 (13%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H    +N  + L++  G  P  +AE + + +   P    V  +G GF+NL L+   
Sbjct: 35  RPSEHADFQSNVGLALAKEAGRPPRDLAEALRSELAAGPFAADV--SGPGFLNLRLADRL 92

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   +++ + +    G  L   G++  I++ + N    MHVGH R  V+GD+L  +++F 
Sbjct: 93  LWAQVTARLAA-PRLGVGLPLAGSRTVIDYSAPNIAKEMHVGHLRTTVIGDSLVRVLSFL 151

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G EV R+ ++ D G Q   L +     + +A ++  ++  +       L  + +    ++
Sbjct: 152 GGEVVRQNHLGDWGTQFGML-IQYLDEHPEAGWHGRAEQGDAAAQVALLDTLYRAARKEF 210

Query: 218 SSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGD 269
             +  +F E     +V      + +  A  +++     A    +D   + ++E D     
Sbjct: 211 ERD-QDFVERARGRVVALQSGDEATTGAWRELVAVSTAAFQQLYDRLGVLLTEAD--SAG 267

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL--K 326
            S    ++D +A +  ++ G             + D    +F   + G D    PL+  K
Sbjct: 268 ESTYNHLLDEVAEE-LLHSG----------AAVESDGALCVFFEDVTGPDGAPVPLIVRK 316

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
            DG Y Y A DLA  + +  E   D ++YV+ +  S + K + A A       A +  + 
Sbjct: 317 KDGGYGYAATDLATLRHRVRELRADRILYVVDARQSLHFKMVFATARRAGWLPAGVEAVH 376

Query: 386 CEL-VRLYRDGMPIKMSKRAGDFITLRHVVD---------------------------EV 417
                 +   G P K   R G  + L  ++D                             
Sbjct: 377 VPFGTVMGPGGTPFK--TREGGTVRLAELLDAAVAAAHRAVADKPHELSEAELDDVARAA 434

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L    ++   FD  ++    + N   Y+QYA+AR R++  +A+ + P  + 
Sbjct: 435 GIGAVKYADLSTSRTKNYVFDIDQMVSL-QGNTGVYLQYAHARLRTLLGKAQAVDPAPEV 493

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV---FHG 534
           D      +P E     +E  LI+ L  + +V+       EP++LA YL+ LA     F+G
Sbjct: 494 D----PGLPLEP----AERALILQLEGFGQVLREVADEAEPHRLAGYLFALAKALTEFYG 545

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                        ++A+       RL L    A  +  GL+++G+ +P  M
Sbjct: 546 SCP---------VLKADTPARRANRLALCRLTADTLAQGLDLLGLRAPERM 587


>gi|240948908|ref|ZP_04753264.1| arginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296723|gb|EER47334.1| arginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 575

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 237/601 (39%), Gaps = 120/601 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    +D  VD + IAG GFIN++L+ ++L +  
Sbjct: 37  GDYQANGAMGAAKKLGMNPREFAQKILDNANLDGIVDKLEIAGPGFINIFLNKAWLAEN- 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++  +  + +G       T V +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 96  ANQALQAVNFGIQTANPQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y++D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDLEAFYRAAKEHYDSDEAFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                G    D+Y   +       W  +     V   M+  +++   LN+       +D 
Sbjct: 215 VKLQSG----DEYCRTM-------WKKL-----VDITMRHNQENYDRLNV---TLTEKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
                 +P + +I+ +L  +G   E        L   K+K                   G
Sbjct: 256 MGESLYNPMLPEIVADLKAKGLAVEDEGALVVFLEEFKNKD------------------G 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           D +   + K DG + Y   D+A  K +YE    D  +    S  + ++++    A  ++ 
Sbjct: 298 DPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITR 353

Query: 377 KKAQI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
           K   + +    E     + L +DG P K   R+G  + L+ ++DE               
Sbjct: 354 KAGYVPDSFSLEHPFFGMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISARSTD 411

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      +D +    N++  E +    E  L V L ++   +        P+ L  Y
Sbjct: 471 FARA-----GIDANNLTGNILLTEDK----ERALAVKLLQFEEALNGVAKEGMPHILCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY+LA  F   +      P L   +A    +   RL+L    A  +  GL+++G+++  +
Sbjct: 522 LYELAGTFSSFY---EACPILNAEEA----VKNSRLRLAALTAKTLKQGLDLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|293570628|ref|ZP_06681679.1| arginyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291609299|gb|EFF38570.1| arginyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 563

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 258/596 (43%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+   + D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVQFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I++ L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVELLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDVVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D    +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDISWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|149198116|ref|ZP_01875163.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138718|gb|EDM27124.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 587

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 131/592 (22%), Positives = 239/592 (40%), Gaps = 92/592 (15%)

Query: 43  GHLSTNAAMILSRPLG------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N +M L+  LG      ++P  +A  I+ ++++    +   IAG GFIN  L   
Sbjct: 39  GDYQCNVSMELAGKLGKARGEKVNPRQVATAIMEKLEVSELSEEPEIAGPGFINFKLK-- 96

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +L+   ++ +   R  I K     +V ++F   N    MHVGH R  ++GD++A  
Sbjct: 97  --NDVLADYAITMLRDERLGIAKVANPERVLVDFSGPNLAKEMHVGHLRSTIIGDSVARF 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHV 209
           M F G+EV R  ++ D G Q   L   +      AL N +    +DL + Y     +   
Sbjct: 155 MEFEGHEVLRMNHVGDWGTQFGMLIQFIRTTRPGALENPENFEIADLEDFYREAKKMFDE 214

Query: 210 GKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
             E  D     +++    +E  L + K +  +++          +  Q DI IS+    R
Sbjct: 215 SDEFKDAARRAVVDLQSGDEATLAVWKVFCEESLKHC-----HEIYGQLDIKISD----R 265

Query: 268 GDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+ +    ++D++++L   G          K++ T+        +        DD   P 
Sbjct: 266 GESAYNDMLKDVVEDLKSAG----------KAEQTEGA----WGVFLDGYKNKDDEPLPT 311

Query: 325 L--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           +  KSDG Y Y   DLA  + ++ E+  D +IYV  +    +  ++  ++  +       
Sbjct: 312 IVQKSDGGYIYATTDLAAIRYRFAEQKTDKLIYVTDARQKTHFDQVFEISELMDWAPKDS 371

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
              +   + L  DG P K   R G  + L+ ++ E                         
Sbjct: 372 MRHIGFGMMLGADGKPFKT--RTGGTVKLKDLLAEAESRAGELARELTPGLSEEEYKEIA 429

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFP 473
              G   V++  L    +    FD+ K+   +  N   Y+   +AR R + R+A  D+  
Sbjct: 430 FAAGLGGVKYSDLSHGVATDYKFDWNKML-ATDGNTAIYILMTFARTRGLSRKAGVDVDS 488

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +D     R    Q       E++LI  +A  P V +       P+ L  +LY+LA  F 
Sbjct: 489 LVDATDLARLTEEQ-------EIKLIKKIASTPDVWQGVVRDLAPHLLLNHLYELARDFG 541

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             W+          ++  + +L   RL L   V  ++  GL+++G+++ +++
Sbjct: 542 SFWNS------CPIMKLEDEELKQSRLALAGGVGRVLKWGLSMVGIQTLDKL 587


>gi|300122665|emb|CBK23232.2| unnamed protein product [Blastocystis hominis]
          Length = 601

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 241/595 (40%), Gaps = 124/595 (20%)

Query: 48  NAAMILSRPLGL---------DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           N+AM L++ L           +P    ++I+  +     V+   +AG GFINLYL  S++
Sbjct: 53  NSAMGLTKKLQALRGKENAPKNPRECGQIIIDHLPESEFVEKTELAGPGFINLYLKKSWV 112

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + + SI+  G         +  +V I++ S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 113 AQHILSILNHGFVPPPT---ERKRVIIDYSSPNIAKDMHVGHLRSTIIGDSLARILEFCG 169

Query: 159 YEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEG 199
           +EV R  ++ D G Q   L                    L+VF++  +  ++ D    E 
Sbjct: 170 HEVIRINHVGDWGTQFGMLIAHLQDIAPDFETNPPSIEDLTVFYKAAKCKFDEDKAFQER 229

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            +         +E+ +  S    N    K L  V +       K+     K LN+   + 
Sbjct: 230 AH---------QEVVNLQSGVPKNLAMWKTLCSVSE-------KMFSKVYKMLNVDPRLK 273

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMV 316
           +  + F                     Y  +LP    +   K    D D  ++LF     
Sbjct: 274 MMGESF---------------------YNPLLPAMVKELDAKGLLQDSDGAKVLFPQ--- 309

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH-------------SG 362
           G +V   + KSDG + Y + D+   K +  E   D +IYV+ S               +G
Sbjct: 310 GFEVPLIIQKSDGGFGYDSTDMTAIKYRIQEMKADWIIYVVDSGQALHFQQVFQAARDAG 369

Query: 363 YVK--RLEAVAAAVSE--------KKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT--- 409
           +V   RL+ V   V +         +A  +V L +L+    +     M KR  D ++   
Sbjct: 370 WVGSVRLDHVGFGVVQGEDKKKFKTRAGKSVRLVDLLNEAAEKATAIMKKRVEDGVSGVS 429

Query: 410 ----LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV-FYVQYAYARCRSI 464
               +     ++G   V++  L  + + L D+ F   +  S E     Y+QY++ARC SI
Sbjct: 430 DPKEIEEAAAQLGYGGVKYFDL--RQNRLSDYVFSFERMLSPEGDTNVYLQYSHARCMSI 487

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A    P+   +L     I  E     SE  L  ++  +  V+E   +   P ++  Y
Sbjct: 488 IRKA----PEEVEELKKHTQITLEH---PSEWDLACYILRFSDVLEQVPMDLMPNRICKY 540

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +YDL+   +G +   R+   +   + N+      RL LV A   ++  G +++G+
Sbjct: 541 IYDLSIKLNGFY---RDCRVIGSPEQNS------RLLLVAAAEKVMRQGFDLLGI 586


>gi|219682170|ref|YP_002468554.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254782948|sp|B8D7E4|SYR_BUCAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219621903|gb|ACL30059.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085983|gb|ADP66065.1| arginyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086558|gb|ADP66639.1| arginyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 574

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 145/592 (24%), Positives = 244/592 (41%), Gaps = 82/592 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           VI   +    GH   N  + ++    L P  +A  I+  IK       +  +  GFIN  
Sbjct: 26  VITLNKKTKIGHYQLNNLIKIANISNLKPFELANRIILNIKKKYMYKEITFSQPGFINFL 85

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++P ++ + L  I +S    G N +     + I++ S N    MH+GH R  ++GD +A 
Sbjct: 86  INPYWISEQLEKIFLSP-RLGINHVN-AQNIVIDYSSPNIAKEMHIGHLRSTIIGDVMAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKH-V 209
           ++ F G+ V R  +I D G Q   L   + +   + L N+   L   E YY     K+ +
Sbjct: 144 ILDFLGHNVIRANHIGDWGTQFGML---IAYLEVKKLVNSPLSLMKLEEYYCKAKKKYDI 200

Query: 210 GKELADK---YSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +  A+K   Y  +L N   +    W  +V   ++    KI +     L  +H   + E 
Sbjct: 201 DQLFAEKSREYVVKLQNGDQYCYSIWKKLV-SITMLENCKIYKRLHVTLKKKHT--MGES 257

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +++  P    +II++L  +    E      K+ +T     + K  L      G+ +   
Sbjct: 258 IYNKMLP----NIIEDLKNKKIAIE------KNGSTIVFLKEFKNRL------GEPMGVV 301

Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + K D  + Y   D+A  K +Y+    D +IY   S    ++  L+A   A        N
Sbjct: 302 IQKKDKGFLYSTTDIACLKYRYQVLHADRIIYYTDSRQHQHL--LQAWTIAKKALYISQN 359

Query: 383 VLLCELV---RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-------- 431
           +LL   +    L +D  P K   R GD I L  ++DE    ++R +   + N        
Sbjct: 360 LLLEHHIFGMMLSKDKRPFKT--RDGDTIKLSALLDEATERAMRLIKNKQPNLSKKKLNQ 417

Query: 432 -SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCRSIFRQAKDIFP 473
            S ++     K  + SK    N +F              Y+QYAY R  SI +++     
Sbjct: 418 LSNIIGVGAVKYADLSKNRNTNYIFDWNEMLSFEGNTAPYIQYAYTRIVSILKKSNMPIK 477

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            L   +F    + +ESE +     L + + E+  +I   +    P+ L  YLY LA+ F 
Sbjct: 478 KLKEKIF----LTKESEIN-----LAIKILEFEEIILLISQKGTPHILCKYLYHLATSF- 527

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              SH  EN  + F +    K    RL+L    A  +  GLN++G+    +M
Sbjct: 528 ---SHFYENCSILFPKK--IKTCKSRLKLSILTAKTLKKGLNMLGIRVVKKM 574


>gi|256425385|ref|YP_003126038.1| arginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040293|gb|ACU63837.1| arginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 642

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 132/607 (21%), Positives = 241/607 (39%), Gaps = 131/607 (21%)

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK----GTKVNIEFVSA 130
           +PD+ + +   KGF+N+ ++  Y  + L         +    IGK    G KV +E+ S 
Sbjct: 71  NPDLVAGYNVIKGFLNIQVNEQYWAQYLQQ------HFNNRNIGKKPSNGKKVMVEYSSP 124

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQA 188
           N   P+H+GH R   +G  ++ ++  +GYEV +   +ND G  I  + LA  +F      
Sbjct: 125 NTNKPLHLGHLRNNFLGYAVSEILKANGYEVIKANLVNDRGIHICKSMLAWQLFAH---- 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------------- 226
                 D PE    G+   H+  +   K+ S L    E                      
Sbjct: 181 -----GDTPES--TGIKGDHLVGDYYVKFESILKEQTEPIIARALEHDYKDFEGADKERM 233

Query: 227 EKWLPIVKDYSVQA---MMKIIRDDLKALN-----IQHDIFISEDDFHRGDPSPIRDIID 278
           EK + +     +QA    +  + D++K L+     I     I    +  G+P  +R +  
Sbjct: 234 EKLVTVFHKPEIQADQEKLDKLNDEIKELSRKQTEIMQQAKIMLQQWEAGNPE-VRALWA 292

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST--MVGDDV---------------- 320
            +   G+VY+G       +T ++  +D  ++ + S   ++G D+                
Sbjct: 293 TM--NGWVYKGF-----DQTYKRLGIDFDKMYYESETYLLGKDLVEEGLAKGILFKKEDN 345

Query: 321 ------------DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
                       ++ LL+ DG+  Y   DL   + KY +   D  +YV+  + + + K L
Sbjct: 346 SVWIDLTADGLDEKLLLRGDGTSVYMTQDLGTARLKYADYQMDQSLYVVADEQNYHFKVL 405

Query: 368 EAVAAAVSEKKA----QINVLLCEL----------VRLYRDGMPIKMSKRAGDFITLRHV 413
           + +   + E  A     ++  + EL            +  D + ++M   A +       
Sbjct: 406 QLILQKLQEPCADGIYHLSYGMVELPSGRMKSREGTVVDADDLIVEMINTAEEQTKASGK 465

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYA 459
           +D++  D++  +        L    F  ++   K+  VF              +VQYA+A
Sbjct: 466 LDDMSEDALGLLY---NMIGLGGLKFFLLRVDPKKKMVFDPKESISLQGFTSTFVQYAHA 522

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R +SI R   D+ PD+D           +    T E +LIV   +Y  V+E A     P 
Sbjct: 523 RIKSILR---DVAPDVD----KLEGYCHKGSLTTLEKELIVLNEQYDNVLEEAAKEMSPS 575

Query: 520 KLAFYLYDLASVFHGHWSHGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
            +A Y Y LA  F+  ++  ++  P     QA   +   +RLQ++   A+ I   + ++G
Sbjct: 576 VIANYAYQLAQTFNSFYAEKKDGIPVHSVKQAETPEKQKLRLQIIKLTATTIAKSMKLLG 635

Query: 579 VESPNEM 585
           ++ P  M
Sbjct: 636 IDVPERM 642


>gi|29839939|ref|NP_829045.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301690|sp|Q824H4|SYR_CHLCV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29834286|gb|AAP04923.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 564

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 230/585 (39%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR--- 99
           GH   N AM L+R L + P  IAE IV  I  +    S+ IAG GFIN   S  +L    
Sbjct: 40  GHYQCNDAMKLARTLKMAPRAIAEAIVNHIPKEI-FTSIEIAGAGFINFTFSKEFLNNSL 98

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  S  + SG       +    KV I+F S N    MHVGH R  ++GD LA + AF G 
Sbjct: 99  KTFSEELSSGFR-----VKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGN 153

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V+R  +I D G      A  +   Y Q   + D +  E             +L   Y  
Sbjct: 154 DVSRLNHIGDWGT-----AFGMLITYLQEEPSEDIENLE-------------DLTVLYKK 195

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+      K  S   ++ +   D  AL +   I  ISE  F +     I +I+D
Sbjct: 196 AHARFAEDAEF---KKRSQTNVVALQAGDPSALKLWKQICAISERAFQK-----IYNILD 247

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             + ++G   E    P   +  Q  D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 248 IAIEKRG---ESFYNPFLPEIIQ--DLENKNLITISDNAKCVFHEGFSIPLMVQKSDGGY 302

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCE 387
            Y   DLA  + +    G D +I V     S + + LEA A A      K+   +V    
Sbjct: 303 NYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEATALAAGYLPNKETFSHVGFG- 361

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
              L  D    K   R+G+ I L+ ++D                            +G +
Sbjct: 362 ---LVLDSEGKKFKTRSGENIKLKELLDTAIDQAKATLKEHRPEISDEEISSRAPILGIN 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++++  L         F F K+  + + N   ++ YAY R + I R+       LD +  
Sbjct: 419 AIKYADLSSHRVSDYIFSFEKML-RFEGNTAMFLLYAYVRIQGIKRRLG--IETLDLEAT 475

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P    P       SE  L + L  +P  I+       P+ L  YLY L + F        
Sbjct: 476 PNIQEP-------SEEALALALLRFPEAIDLTLKDLCPHFLTDYLYMLTNKF-------- 520

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L   V   + +G++++G+++ +++
Sbjct: 521 -NAFFRDCHIEGSSHQKERLYLCALVEKTLAAGMHLLGLQTLDKL 564


>gi|72091995|ref|XP_781259.1| PREDICTED: similar to Arginyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
 gi|115958557|ref|XP_001191024.1| PREDICTED: similar to Arginyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
          Length = 665

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 255/598 (42%), Gaps = 102/598 (17%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AMI+++ L      + P  +A+ I A I  +  ++ V IAG GFIN++L  S+
Sbjct: 115 GDYQCNSAMIIAQQLKAQGSPVSPRVVAQQIQANIPSNDVIEKVDIAGPGFINIHLKKSF 174

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +  +++ I+  G+      + K  KV I+  S N    MH+GH R  ++G++++ LM F 
Sbjct: 175 ITPLVTGILTQGVL--PPPLSKKRKVVIDMSSPNIAKEMHIGHLRSTIIGESISRLMEFV 232

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKEL 213
           G++V +  ++ D G Q   L   +  ++    Y N+S    DL + +Y    ++  G E 
Sbjct: 233 GHDVLKVNHLGDWGTQFGMLITHLADQFPN--YLNESPPIQDL-QKFYKESKVRFDGDEE 289

Query: 214 ADKYSSELLNFPEEKWLPIVK------DYSVQAMMKI-IRDDLKALNIQHDIFISEDDFH 266
             K + +++   +     I+K      D S     KI  R D+K L  + + F  E    
Sbjct: 290 FKKRAYKMVVRLQGGEPSIIKAWELICDISKTEFNKIYARLDVKNLIPRGESFYQER--- 346

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-- 324
                 +  ++  L   G++              + D  RK       M   D   PL  
Sbjct: 347 ------MNVVVQKLEAGGHL--------------EFDDGRK------IMFTPDSAVPLTI 380

Query: 325 LKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDH--------SGYVK--------- 365
           +KSDG YTY  +D+A  Y +   ++G + +IYV+ +          SG  K         
Sbjct: 381 VKSDGGYTYDTSDMATLYQRVHEDKG-ERLIYVVDAGQATHFDAIFSGCRKLGWYDPNNV 439

Query: 366 RLEAVAAAV--SEKKAQINVL---LCELVRLYRDGM--PIKMSKRAG--DFIT---LRHV 413
           R+E V+  V   E K +       + +LV L  +G+   ++  K  G    +T   L+  
Sbjct: 440 RIEHVSFGVVLGEDKKKFKTRSGDVVKLVSLLDEGLRRSLETLKEKGRDKVLTAEELKAA 499

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            + V    +++  L  + +    F F K+ E  K N   Y+ YAY R RSI R+A ++  
Sbjct: 500 QESVAYGCIKYADLSHRRTNDYIFSFDKMLE-DKGNTAVYLLYAYTRIRSISRKA-EVLA 557

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +   +      IP E      E +L   LA +P VI         + +  YLY++A+ F 
Sbjct: 558 ETLKEAAKTTSIPVEH---PKEWKLAKCLARFPEVISRTLDDLFIHGICDYLYEVANTFT 614

Query: 534 GHWS------HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         ++   +  V          RL L  A A+I+    +I+G+    +M
Sbjct: 615 EFYEVCYCIVKNKQTGEIESVDTG-------RLLLCEATAAIMAKCFDILGLHPVEKM 665


>gi|15616858|ref|NP_240071.1| arginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681613|ref|YP_002467999.1| arginyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471299|ref|ZP_05635298.1| arginyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11182438|sp|Q44683|SYR_BUCAI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782947|sp|B8D940|SYR_BUCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|25293287|pir||E84958 arginine-tRNA ligase (EC 6.1.1.19) [imported] - Buchnera sp.
           (strain APS)
 gi|10038922|dbj|BAB12957.1| arginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624456|gb|ACL30611.1| arginyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311087139|gb|ADP67219.1| arginyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 574

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 145/592 (24%), Positives = 244/592 (41%), Gaps = 82/592 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           VI   +    GH   N  + ++    L P  +A  I+  IK       +  +  GFIN  
Sbjct: 26  VITLNKKTKIGHYQLNNLIKIANISNLKPFELANRIILNIKKKYMYKEITFSQPGFINFL 85

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++P ++ + L  I +S    G N +     + I++ S N    MH+GH R  ++GD +A 
Sbjct: 86  INPYWISEQLEKIFLSP-RLGINHVN-AQNIVIDYSSPNIAKEMHIGHLRSTIIGDVMAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKH-V 209
           ++ F G+ V R  +I D G Q   L   + +   + L N+   L   E YY     K+ +
Sbjct: 144 ILDFLGHNVIRANHIGDWGTQFGML---IAYLEVKKLVNSPLSLMKLEEYYCKAKKKYDI 200

Query: 210 GKELADK---YSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +  A+K   Y  +L N   +    W  +V   ++    KI +     L  +H   + E 
Sbjct: 201 DQLFAEKSREYVVKLQNGDQYCYSIWKKLV-SITMLENCKIYKRLHVTLKKKHT--MGES 257

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +++  P    +II++L  +    E      K+ +T     + K  L      G+ +   
Sbjct: 258 IYNKMLP----NIIEDLKNKKIAIE------KNGSTIVFLKEFKNRL------GEPMGVV 301

Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + K D  + Y   D+A  K +Y+    D +IY   S    ++  L+A   A        N
Sbjct: 302 IQKKDKGFLYSTTDIACLKYRYQVLHADRIIYYTDSRQHQHL--LQAWTIAKKALYISQN 359

Query: 383 VLLCELV---RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-------- 431
           +LL   +    L +D  P K   R GD I L  ++DE    ++R +   + N        
Sbjct: 360 LLLEHHIFGMMLSKDKRPFKT--RDGDTIKLSALLDEATERAMRLIKNKQPNLSKKKLNQ 417

Query: 432 -SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCRSIFRQAKDIFP 473
            S ++     K  + SK    N +F              Y+QYAY R  SI +++     
Sbjct: 418 LSNIIGVGAVKYADLSKNRNTNYIFDWNEMLSFEGNTAPYIQYAYTRIVSILKKSNMPIK 477

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            L   +F    + +ESE +     L + + E+  +I   +    P+ L  YLY LA+ F 
Sbjct: 478 KLKEKIF----LTKESEIN-----LAIKILEFEEIILLISQKGTPHILCKYLYHLATSF- 527

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              SH  EN  + F +    K    RL+L    A  +  GLN++G+    +M
Sbjct: 528 ---SHFYENCSILFPKK--IKTCKSRLKLSILTAKTLKKGLNMLGIRVVKKM 574


>gi|52425385|ref|YP_088522.1| arginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386992|sp|Q65SX3|SYR_MANSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52307437|gb|AAU37937.1| ArgS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 576

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 131/585 (22%), Positives = 228/585 (38%), Gaps = 87/585 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++ ++ +    +   IAG GFIN++L+ +++ +  
Sbjct: 37  GDYQANGIMGAAKKLGLNPREFAQKVLEQVDLSDIAEKTEIAGPGFINIFLNKNWVAQ-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +   ++   +G       T V I++ S N    MHVGH R  ++GD +A  + F G  V 
Sbjct: 96  ADTALNTPNFGIKTAHPQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARALEFMGNHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ND +        V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHADAMQLSDLEAFYRAAKETYDNDEEFAVKARSYV 214

Query: 205 --------YLKHVGKELAD------KYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDL 249
                   Y + + K+L D      + + E LN    EK   ++ +     M+  I +DL
Sbjct: 215 VKLQSGDEYCRTMWKKLVDMTMQQNQRNYERLNVTLTEK--DVMGESLYNPMLPAIVEDL 272

Query: 250 K--ALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           K   L ++ D  + +  D+F   D  P+  I+      G++Y                 D
Sbjct: 273 KKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQK-KDGGFLYTTTDIAAAKYRYHTLHAD 331

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R  L+F  T     + +  L +  +         Y    +     N   ++G D   +  
Sbjct: 332 RA-LVFSDTRQSQHMQQAWLITRKA--------GYVPDSFSLEHHNFGMMLGKDGKPFKT 382

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R        S    ++  LL E V   R  + I     A        V++ V   SV++ 
Sbjct: 383 R--------SGGTVKLADLLDEAVE--RATLLINEKNTALSEQEKAAVIEAVAIGSVKYA 432

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +  +    FD+  +    + N   Y+QYAY R RSIF +          D+ P  + 
Sbjct: 433 DLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT---------DVNPTALS 482

Query: 486 PQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GR 540
               E  +  E  L + L ++   ++       P+ L  YLY+LA VF   + H      
Sbjct: 483 AAHIEIRNDKERALAIKLLQFEEAVQTVAKDGTPHILCNYLYELAGVFSSFYEHCPILNA 542

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           E P           + + RL+L       +  GL+++G+++  +M
Sbjct: 543 EEP-----------VKLSRLKLAKLTEKTLKQGLDLLGIKTVEKM 576


>gi|332157706|ref|YP_004422985.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033169|gb|AEC50981.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 629

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 161/360 (44%), Gaps = 50/360 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            ++K+ +KEI  + + E ++ D   +E       G   T  A  L+R L   P+ IAE I
Sbjct: 11  EKVKDIVKEIAPEWEGEVELKDTPSLE------FGDFGTPIAFKLARLLRKPPIQIAEEI 64

Query: 69  VARIKID-PDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           V R K + P+         G+IN +++  YL RK++  I+     +G + +G G KV +E
Sbjct: 65  VERFKQELPEGIMDLKVVNGYINFFINYEYLARKLIEEILEKADRFGSSDLGHGKKVIVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY- 185
             S NPT P+H+GH R A++GD +A ++ F GY V  + YI+D G Q       V+W Y 
Sbjct: 125 HTSVNPTKPLHMGHARNAILGDVMARILRFLGYTVEVQNYIDDLGVQFA----QVYWGYL 180

Query: 186 ----------QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWL 230
                     +     N  + P  +  G+    V K++      DK    L+   EE  +
Sbjct: 181 NLRDKFDEIMENLRKKNLKENPIDHALGLLYVEVNKKIEEDPEVDKEIRVLMKELEEGRV 240

Query: 231 PIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
              K  +  V+A M    +    L I++D+ + E D  +     + +I   L  +    E
Sbjct: 241 EGRKLAEDVVRAQM----ETTYRLGIKYDLLVWESDIVK---RRLFEIAVELLEKN---E 290

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY 345
               P + K      MD ++L         D+  P   L +SDG+ TY   D+AY   K+
Sbjct: 291 NFYVPEEGKYKGAFVMDLRKLF-------PDMKNPYMVLRRSDGTATYTGKDIAYHLWKF 343



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYA+ARC SI R+A+     +++ +          E    E +L++ L+++P ++E A
Sbjct: 506 YIQYAHARCSSILRKARGQGIPIEWRVLLEKA--NFKEITEREKELLILLSKFPEIVEQA 563

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P+ +A+Y  +LAS+F+  +    ++P L+  +     +   RL LV AV  ++ +
Sbjct: 564 GRDVKPHLIAWYANELASLFNKFYM---DHPVLKAEEG----IREARLLLVMAVKQVLRN 616

Query: 573 GLNIIGVESPNEM 585
            L ++G+E+P +M
Sbjct: 617 ALWLLGIEAPEKM 629


>gi|261867613|ref|YP_003255535.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412945|gb|ACX82316.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 577

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 134/598 (22%), Positives = 237/598 (39%), Gaps = 112/598 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG++P   A+L++A+ ++    +   IAG GFIN++L   +L + +
Sbjct: 37  GDYQANGIMPAAKKLGINPREFAQLVLAKAELQDIAEKTEIAGPGFINIFLKDGWLAENI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  V   + G +   K T V +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 97  GN-AVKDSKLGIHHQDKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKKHYDEDPVFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               V  +  D+Y   +       W  +VK       M+  + +   LN+       +D 
Sbjct: 215 ----VKLQSGDEYCRTM-------WQKLVK-----ITMQQNQHNYDRLNV---TLTEKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---V 320
                 +P +  I++ L +QG   E                D   +++       D   +
Sbjct: 256 MGESLYNPMLPGIVEGLKKQGLAVED---------------DGAWVVYLDEFKNKDGGPM 300

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG-SDHSGYVKRLEAVAAAVSEKKA 379
              + K DG + Y   D+A  K +YE    N   V   +  S ++++    A  ++ K  
Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQ----AWLITRKAG 356

Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
            + +    E     + L +DG P K   R+GD + L  ++DE                  
Sbjct: 357 YVPDSFQLEHKNFGMMLGKDGKPFKT--RSGDTVKLADLLDEAIERAGVLISQKSTALSE 414

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  SV++  L +       FD+  +    + N   Y+QYAY R RSIF +
Sbjct: 415 QEKADVIEAVGIGSVKYADLSKNRITDYVFDWDNMLS-FEGNTAPYMQYAYTRIRSIFNR 473

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           ++ I P  +    P  +  ++      E  L + L ++   I+       P+ L  YLY+
Sbjct: 474 SQ-ISPG-EVKQAPLTLTNEK------ERALAIKLLQFEEAIQLVAKDGTPHILCAYLYE 525

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA VF   + H         +   ++++ + RL+L       +  GL+++G+++   M
Sbjct: 526 LAGVFSSFYEH------CPILNNEDQQVKLSRLKLALLTERTLKQGLDLLGIKTIERM 577


>gi|313157972|gb|EFR57378.1| arginine--tRNA ligase [Alistipes sp. HGB5]
          Length = 593

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 240/589 (40%), Gaps = 124/589 (21%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I E + A +   P+V S F   KGF+NL L  ++     + I      +G+     G  V
Sbjct: 62  IGEYMTANV---PEVKS-FNVIKGFLNLTLDCAFWAARFAEIAADA-NFGQ-APDTGRTV 115

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IE+ S N   P+H+GH R  ++G ++A ++  +G+ V +   +ND G  I    L+  W
Sbjct: 116 MIEYSSPNTNKPLHLGHIRNNLLGYSVAQILRANGHNVIKANLVNDRGIHICKSMLA--W 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-----------------------ELADKYSSE 220
           +    LY N          G +L  VGK                       E A K +  
Sbjct: 174 K----LYGNGETPASSGMKGDHL--VGKYYVEFDKHYKAQIKELTAQGQTEEEAKKNAPV 227

Query: 221 LLNFPE--EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGD 269
           +L   E   KW    KD  V ++ + +            KAL +  D I+     +  G 
Sbjct: 228 MLEAQEMLRKWE--AKDPEVYSLWETMNGWVYEGFDVTYKALGVDFDKIYYESQTYLLG- 284

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
               + +++   R+G  Y                 D   +    T  G D ++ LL+ DG
Sbjct: 285 ----KSLVEEGLRKGVFYR---------------RDDNSVWIDLTADGLD-EKLLLRGDG 324

Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLC 386
           +  Y   DL     ++E    D+MIYV+G++ + + + L+ +   +  ++    I  L  
Sbjct: 325 TSVYMTQDLGTAYRRFEENRLDDMIYVVGNEQNYHFQVLKLILKKLGYADWSDHITHLSY 384

Query: 387 ELVRL------YRDGMPIKMSKRAGDFI-TLRHVVDEVG---------SDSVRFMMLWRK 430
            +V L       R+G  +       D + T R + DE+G         +D+V  M+    
Sbjct: 385 GMVELPEGKMKSREGTVVDADDLIADMVSTAREMSDELGKLDGCTEEEADAVSTMV---- 440

Query: 431 NSELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLD 476
              L    +  +K   K+  +F              ++QY +AR  S+ R+A +    +D
Sbjct: 441 --GLGALKYFILKVDPKKTMLFDPRESIDFNGNTGPFIQYTHARICSVLRKAAE--AGID 496

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F          ++++   E+ L+  L EYP V+  A     P  +  Y+Y+LA  F+G++
Sbjct: 497 FS------GAAQADYLPEEIALVKSLTEYPSVVAAAGENFAPSIVGAYVYELAKQFNGYY 550

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            H         ++  N +   MRLQL   VA +I SG+ ++G++ P  M
Sbjct: 551 -HDHS-----ILKEENDETRRMRLQLAQQVARVIRSGMKLLGIDVPERM 593


>gi|325913394|ref|ZP_08175761.1| arginine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477320|gb|EGC80465.1| arginine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 558

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 251/601 (41%), Gaps = 115/601 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S++   +I     K L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLEEFNRI----YKELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
            DD +  L LKSDG+  Y   DLA   Y K +Y+  F   +YV G++ SG+ K+L+ V  
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410
            +     Q ++       + ++G   K+S R G+ + L                      
Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400

Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI
Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     D    L            D     +   +A++P +I+ A    EP  +A Y
Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P E
Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557

Query: 585 M 585
           M
Sbjct: 558 M 558


>gi|257884328|ref|ZP_05663981.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820166|gb|EEV47314.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 563

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 256/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   +  K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISEKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A     
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464

Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      +P E+      D +  +++  + +YP  + +A    EP  +A +   LA
Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ +++H +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|257066823|ref|YP_003153079.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798703|gb|ACV29358.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 565

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 233/582 (40%), Gaps = 111/582 (19%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF-----INLYLSPSYLRKILSSIVV 107
           L++ L  +P  IAE +     +D           GF     +N YL+    RK+    ++
Sbjct: 46  LAKTLRKNPAIIAEDLAKGFDLD-----------GFEKIENLNAYLNFYVDRKVFEEEIL 94

Query: 108 SGIE-----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I      YG +  G G  + I+F S N   P H+GH R  V+GD L ++  F GY   
Sbjct: 95  KEILEKKEKYGSSDKGNGKNIVIDFSSVNIAKPFHIGHIRSTVIGDALRNIHDFLGYNTI 154

Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216
              YI D G Q  T+ A    W  ++ L  N    P      +Y+++  +     ++ D+
Sbjct: 155 ASNYIGDYGTQFGTMIAAYKLWGDEEKLKEN----PIKELLALYVRYNSEAANDEKMMDE 210

Query: 217 YSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +E +N    EE+   + K +   +  +  R   K L+I  D +  E  +H      I 
Sbjct: 211 ARAEFMNLENGEEEATRLWKHFKEISFNEFDRV-YKMLDIDFDNYNGES-YH---SEFIP 265

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSY 331
           D+++ L  +  + E       S      D+              + D P   ++KS+GS 
Sbjct: 266 DVLEELKEKNLLVE-------SDGAYIVDLS-------------EFDLPPAIIIKSNGSS 305

Query: 332 TYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA------------------- 371
            Y   D+A     K    FD  +YV+ +  + + ++L A+                    
Sbjct: 306 AYITRDIATAINRKKVYDFDKNLYVVATQQNLHFQQLFAILKLMGYDFYDDCKHIPFGMV 365

Query: 372 ----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                 +S +K Q+ V L +++    D     M  R      +  V + VG  +V+F  L
Sbjct: 366 SLKDQTLSTRKGQV-VFLEDVLNKAIDKTKEIMENRDSKIENVGEVAEIVGIGAVKFQEL 424

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           +    +   FD+ +V     E    YVQY YAR +S+ R+A           F  N    
Sbjct: 425 YNNRIKDYVFDWDEVLNFDGETGP-YVQYTYARAKSVLRKAD----------FKENT--- 470

Query: 488 ESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           E  FD      E  L+  L  +  V+  A    EP  +  +L ++A  F+  ++  +   
Sbjct: 471 EISFDNITSDEEFALVKALGNFKDVVAKAAEKYEPSLITRHLTEIAKNFNKFYNACQ--- 527

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   + K+   RL L +A + +I +GL ++G+++  +M
Sbjct: 528 ----INVEDEKIKEERLALSYATSIVIKTGLGLLGIKTVEQM 565


>gi|325186294|emb|CCA20800.1| arginyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 652

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 249/600 (41%), Gaps = 106/600 (17%)

Query: 47  TNAAMIL--SRPL-GLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKIL 102
           +N A+IL  S P   L P  IA  ++  +  +P +  +  ++  GF+N  L   +L + +
Sbjct: 98  SNIALILAHSSPYNALQPSEIAHKLLENLPSEPRILQAASVSPAGFLNFTLCDRFLARFV 157

Query: 103 SSIVVSG----IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
             +         E  R+++       ++F S N    +HVGH R +V+GDT+ +L+ + G
Sbjct: 158 HEMASHNEPQHSEESRSIL-------VDFASPNYGKKLHVGHLRSSVIGDTICNLLEYRG 210

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYL----KHVGKEL 213
           ++V R  +  D G+ + TL  S+    +  AL  NDS L   Y  G       K  G   
Sbjct: 211 HKVARVSHSGDLGSAMATLLASIVTEKESYALMRNDSQLAAMYERGKMQLARDKTGGFTS 270

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+   LL  PE       +D  + AM +            H   +S+D + R     +
Sbjct: 271 LVKHIVLLLQQPENPSSTFHRD--ILAMWR------------HICALSQDSYQRIFER-L 315

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ---LLFRSTMVGDDVDRPLLKSDGS 330
              ++N     Y+   ++ P       +  + R Q    +F S  +   + R   K DG 
Sbjct: 316 NVSVENRPESSYIR--MIHPVLEDLKSRGIITRSQGADCIFVSPQLPPLIVR---KKDGG 370

Query: 331 YTYFAADLAYFKCKY------ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-----KKA 379
           + Y   DLA   C+          ++ +IYV     S + ++L  +AA  +E      K 
Sbjct: 371 FLYATIDLACLYCRLFGSEIDATRYNEIIYVTDQSQSLHFQQL-FLAAQRAEWIGKSSKV 429

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------------ 415
           +++ +   LV L  DG   K+S R G F  L  ++D                        
Sbjct: 430 ELHHVAFGLV-LGSDGS--KLSSRNGAFDYLEDLLDTAAIECQNRSILPSNELEKRAGKE 486

Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDI 471
               +G  +VR+  L ++ +   D+ F   +  S K N   Y+ YA AR   I R+   +
Sbjct: 487 LFCRIGDAAVRYFELSQQRTR--DYKFTWDQALSFKGNTGVYLLYACARLEGILRK---L 541

Query: 472 FPDLDFDLFPRNVIPQE------SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             +LD+++  R    +E      + + +SE  L + LA+    +  AT    P+ L  YL
Sbjct: 542 HQELDYEVLSREKSTKELLTASSAHWQSSERALALILAQMEDEVSTATTHLTPHTLCEYL 601

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y +AS FH  +    E+ R+  V     +L +  L        I+  GL+++G+E  + M
Sbjct: 602 YRVASHFHAFY----EDCRVVGVPEMEARLCLCAL-----TWKILTRGLHLLGIEPVDRM 652


>gi|257867704|ref|ZP_05647357.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874031|ref|ZP_05653684.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257801787|gb|EEV30690.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808195|gb|EEV37017.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 563

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 251/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I      + + + G  ++N +
Sbjct: 27  LLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-QASFEKIEVVGP-YLNFF 83

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +   +L  ++     +G   IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MDKKAISAHVLEMVLKEKNHFGDQTIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209
            ++   GY+  R  ++ D G Q   L ++   W  ++A+     ++L   Y         
Sbjct: 144 FILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAEPINELLRLYVDFHEAAET 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFH 266
            K+L D   +         W   ++D   +AM   +  RD+ LK  N  +D+   E  F 
Sbjct: 204 DKQLEDDARA---------WFKKLEDGDQEAMDLWQWFRDESLKEFNKIYDML--EVSF- 251

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321
                      D+L  + +           K T+  ++  ++ L +     + VD     
Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLKEDQGAEIVDLAAYD 292

Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370
             P L  KSDG+  Y   D+A   Y K  Y   F   +YV+G++ S + K+L+AV     
Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K +I VLL E++    D    +++++         
Sbjct: 351 FEWADDMTHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIDSAKEQITEKNPTLENKEE 409

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY++AR  SI  +A 
Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKA- 464

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                 DFD      +   S  DT   ++I  +  YP  +  A    EP  +A +   LA
Sbjct: 465 ------DFD---PAAVSSLSLADTESWEVIKLIQRYPETVLQAAEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++      ++ +  +  K    RL LV+AV +++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAN------VKILAEDAEKDA--RLALVYAVTTLLKEDLRLLGLHAPDKM 563


>gi|62184813|ref|YP_219598.1| arginyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313008|sp|Q5L6U4|SYR_CHLAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|62147880|emb|CAH63627.1| putative arginyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 562

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 232/587 (39%), Gaps = 106/587 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L + P  IAE IV +I  + +  S+ IAG GFIN   S  +L   L
Sbjct: 38  GHYQCNDAMKLARTLKMPPRAIAESIVKQISKN-NFSSIEIAGAGFINFTFSKEFLNLSL 96

Query: 103 SSIVVSGIEYGRNL-----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            S       Y R+L     +    KV I+F S N    MHVGH R  ++GD LA +  F 
Sbjct: 97  QS-------YSRDLSSGFRVQDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFV 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  +I D G      A  +   Y Q   + D +  E             +L   Y
Sbjct: 150 GHDVLRLNHIGDWGT-----AFGMLITYLQEESSEDIESLE-------------DLTILY 191

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI 276
               + F E+      K  S   ++ +   D KA  +   I  ISE  F +     I +I
Sbjct: 192 KKAHVRFAEDAEF---KKRSQTNVVALQSGDPKARKLWERICEISERAFQK-----IYNI 243

Query: 277 ID-NLARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSD 328
           +D  + ++G   Y   LP          D+++K L+  S     +  +    PL+  K D
Sbjct: 244 LDIQIEKRGESFYNPFLPEIIE------DLEKKNLITVSDEAKCVFHEGFSIPLMVQKRD 297

Query: 329 GSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G Y Y   DLA  + + E+   D +I V     S + + LEA A A      + +V    
Sbjct: 298 GGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHFQLLEATALAAGYLPNK-DVFSHV 356

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
              L  D    K   R+G+ I L+ ++D                            +G +
Sbjct: 357 GFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVATLKKHRPEMSDAEITERAPVLGMN 416

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++++  L         F F K+  + + N   ++ Y Y R + I R+       L  +  
Sbjct: 417 AIKYADLSSHRVSDYVFSFEKML-RFEGNTAMFILYGYVRIQGIKRR-------LGIEKL 468

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--SH 538
                    E   SE  L + L  +P  I+       P+ L  YLY L + FH  +   H
Sbjct: 469 SLESAANIQE--PSEEALALALLRFPEAIDITLKELCPHFLTDYLYMLTNKFHAFFRDCH 526

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P  +            RL L   V   + +G++++G+++ + +
Sbjct: 527 IEGSPHQK-----------ERLYLCALVEKTLATGMHLLGLQTLDRL 562


>gi|240112733|ref|ZP_04727223.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268598798|ref|ZP_06132965.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268582929|gb|EEZ47605.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 572

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 127/590 (21%), Positives = 242/590 (41%), Gaps = 88/590 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   V +  +Q   N   +L               
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L   Y +  + F E+   P   D + + ++K+   D   L +         D       
Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239

Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320
            + D +    R   V     Y   L P      QK    + D  +++F        G+  
Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
              + K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +  A    +
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRVGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            A+   +    + + +DG P K   R+GD + L  ++ E                     
Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEA 416

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A  
Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                ++D     V+ +       E QL   L ++  V+++      P+ LA YLY  A+
Sbjct: 475 -----EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAAT 524

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +F   +      P L+   A+       RLQL     + +  GL+++G++
Sbjct: 525 LFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567


>gi|303243692|ref|ZP_07330033.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
 gi|302485934|gb|EFL48857.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
          Length = 228

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 7/159 (4%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV--FIAGK 86
           ++ I +E P     G  STN A  L++ L   P+ IAE I   +K + +++ +    A  
Sbjct: 25  METIRLEEPPSLNLGDYSTNIAFRLAKLLKKSPMVIAEEIANSLKSE-NIEGIKDIKAVN 83

Query: 87  GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           G+IN +L+  SY +K +  I+     +G+    K  K+ +E  SANP GP+H+GH R A+
Sbjct: 84  GYINFFLNYNSYSKKGVKKILNEKDNFGKGE-EKNKKIILEHTSANPNGPLHIGHSRNAI 142

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQ--INTLALSVF 182
           VGD+L  ++ F+GY V  +YY+ND G Q  I    LS F
Sbjct: 143 VGDSLKRVLEFAGYNVETQYYVNDMGRQEAIVVFGLSKF 181


>gi|167748068|ref|ZP_02420195.1| hypothetical protein ANACAC_02812 [Anaerostipes caccae DSM 14662]
 gi|167652060|gb|EDR96189.1| hypothetical protein ANACAC_02812 [Anaerostipes caccae DSM 14662]
          Length = 563

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 137/576 (23%), Positives = 246/576 (42%), Gaps = 98/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIE 111
           LS+     P  IA+ +  +IK   D  S   A   ++N ++  + ++ ++L  + V    
Sbjct: 43  LSKIFRKAPNIIAQEVAEKIK-KTDFVSKTAAMGPYVNFFIDRTMFVSEMLKQVSVDN-- 99

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + IG G  + I++ S N     HVGH R  ++G+++  +    GY V R  ++ D G
Sbjct: 100 YGSSEIGCGKTICIDYSSPNVAKNFHVGHLRTTLIGNSIYRIYKKLGYRVERINHLGDWG 159

Query: 172 AQINTLALSV-FWRYQQALYNND-SDLPEGYYPGVYLK-HVGKELADKYSSEL------L 222
            Q   L ++   W  ++A+  N  S+L +     +Y+K H   E  D  + E       +
Sbjct: 160 TQFGKLIVAYKKWGSKEAVEQNGISELMK-----IYVKFHEEAEKDDTLNDEARAWFVKM 214

Query: 223 NFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +E+ L I    KD S+    +I     + L++  D +  E  F+R   S    ++D 
Sbjct: 215 EQGDEEALSIWEWFKDISLIEYKRI----YELLDVDFDSYAGE-SFYRDKTSA---VVDE 266

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L ++G + E       S+     D+++           D     ++K DGS  Y   DLA
Sbjct: 267 LKKKGMLKE-------SEGAFIVDLEKY----------DMTPCLIMKKDGSSIYATRDLA 309

Query: 340 ---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
              Y K  Y+  F+  IYV G +   +  ++  V   +  + A+ +++      +  +G 
Sbjct: 310 AIFYRKKTYD--FEKCIYVTGMEQKLHFAQVFKVVELMGYEWAKTDLIHVPYGLVSLEGG 367

Query: 397 PIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKN 431
             K+S R+G+ I    ++ E                         VG  ++ F  L+ + 
Sbjct: 368 --KLSTRSGNIIYAEDILRESVSKIKEVINDKNPDLQDKEEVAKMVGIGAIIFNDLYNQR 425

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQES 489
            + + F + K+     E    YVQY YAR  S+ R+    D+  ++D  L          
Sbjct: 426 IKDVTFSWDKIHSFDGETGP-YVQYTYARAASVLRKTGITDVPEEIDSSLLT-------- 476

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             D + + L+  L  +P V+E A    EP  +A ++  +A  F+ H+ H  EN       
Sbjct: 477 --DEASVSLLKELIRFPEVVETAAERLEPSVVARFVMSVAQAFN-HFYH--ENQ----CN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + KL   R++LV      I  GL+++G++ P +M
Sbjct: 528 VEDEKLKRARVKLVIIAKKAIKDGLDLLGMKCPEQM 563


>gi|168186728|ref|ZP_02621363.1| arginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295327|gb|EDS77460.1| arginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 563

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 145/585 (24%), Positives = 243/585 (41%), Gaps = 117/585 (20%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V + G  ++N ++    L   IL+ ++  G +
Sbjct: 44  LAKTFRKAPNMIAEELSEKINKEG-FEKVVVLGP-YLNFFMDKGSLTYDILNRVLEEGDK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +GKG  V I++ S N   P HVGH     +G+ L  ++ F GY      ++ D G
Sbjct: 102 YGSSEVGKGKNVTIDYSSPNIAKPFHVGHLFSTSIGNALYRMLNFEGYNSIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADK---YSSEL 221
            Q   L +S +  W  ++AL  +    P      +Y+K H   E    L D+   Y  +L
Sbjct: 162 TQFGKL-ISAYKRWSDEKALEKD----PIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKL 216

Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  +E+   W    K  S++   K+       L ++ D +  E  ++      I++I D
Sbjct: 217 EDGEKEEVELW-ERFKTLSLKEFEKV----YDTLGVKFDSYAGESFYNDKMDDVIKEIDD 271

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAA 336
                    +GIL                    +  M+ +D   P  ++K DG+  Y   
Sbjct: 272 ---------KGILVESNGA--------------KVVMMDEDNIPPCIIVKGDGATIYATR 308

Query: 337 DLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLY 392
           DLA   Y K  Y+  F   IYV+GSD S + K++      +    A     +   LVR  
Sbjct: 309 DLAAAFYRKKNYD--FYKSIYVVGSDQSLHFKQVFKTIEKMGYDWAHDCKHVAFGLVRF- 365

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FC 440
                 K+S R G  I L  +++E  S ++   ++  KN EL + +            F 
Sbjct: 366 ---ADKKLSTRKGQVIFLEDLLNESVSKTLE--VINEKNPELENKEEVAKKVGIGAVIFT 420

Query: 441 KVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
            +K + +++ VF              YVQY YAR +SI R+A +I  ++++         
Sbjct: 421 YLKNKREKDIVFNWSEMLNFEGETGPYVQYTYARGKSILRRAGEIGEEVNYGALN----- 475

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E +L+  L      I NA    EP  L  Y+ ++A  F+            +
Sbjct: 476 -----SKEEFELVKVLGNLEESILNAIDKLEPSILTRYIIEVAKAFN------------K 518

Query: 547 FVQANNRKLTM------MRLQLVHAVASIINSGLNIIGVESPNEM 585
           F  A+N   T        RL+LV A   +I +GLN++G+E   +M
Sbjct: 519 FYNAHNIMATEDVATKNARLKLVEATCQVIKNGLNLLGIEVVEKM 563


>gi|315653179|ref|ZP_07906104.1| arginine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489544|gb|EFU79181.1| arginine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 558

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 252/601 (41%), Gaps = 115/601 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
            DD +  L LKSDG+  Y   DLA   Y K +Y+  F   +YV G++ SG+ K+L+ V  
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410
            +     Q ++       + ++G   K+S R G+ + L                      
Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400

Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI
Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     D    L            D     +   +A++P +I+ A    EP  +A Y
Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P E
Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557

Query: 585 M 585
           M
Sbjct: 558 M 558


>gi|229827434|ref|ZP_04453503.1| hypothetical protein GCWU000182_02823 [Abiotrophia defectiva ATCC
           49176]
 gi|229788372|gb|EEP24486.1| hypothetical protein GCWU000182_02823 [Abiotrophia defectiva ATCC
           49176]
          Length = 603

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 132/609 (21%), Positives = 257/609 (42%), Gaps = 102/609 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLY 92
           RP  C +     N AM  ++     PL IA+ +  ++++  +    + +     GFINL 
Sbjct: 38  RPDLCQY---QCNGAMAAAKEFKKAPLFIADEVADKLQLSEEGKIFEKIEAVNPGFINLT 94

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +L   ++ +  +G  +G    G+  K+ +++   N   P+HVGH R A++G+++  
Sbjct: 95  LKDEFLADYVNEMGETG-NFGYENGGEPKKIVLDYGGPNVAKPLHVGHLRPAIIGESIKR 153

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP------EG 199
           +  F+G EV  + ++ D G  +  +   V  R+ +  Y ++S       + P      E 
Sbjct: 154 IERFAGNEVIGDVHLGDWGLPMGLIITEVRHRHPELPYFDESFTGEYPKEAPFTIEELEE 213

Query: 200 YYPGVYLKHVGKELADKYSSE------LLNFPEEKWLPI---VKDYSVQAMMKIIRDDLK 250
            YP   L  +  +  ++Y +E      LL      ++ +   + D SV  + K    +  
Sbjct: 214 IYP---LASIKSKEDEEYKNEALQATALLQNGNRGYMALWHHILDVSVTDLKK----NYH 266

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +N+  D++  E D     P    D+++ +   G+ Y                +    L+
Sbjct: 267 NINVSFDLWKKESDVQVYIP----DMVEKMKADGFAY----------------ISEGALV 306

Query: 311 FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVK 365
              T   D  + P   +LKSDG+  Y   D+A    +  + F+  ++IYV+      + +
Sbjct: 307 VDVTKEDDKKEIPPCIILKSDGAALYSTTDVATI-LERVKLFNPTDIIYVVDKRQGMHFE 365

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           ++            ++N++      +  +DG P K   R G  + L  ++ E+ ++ V  
Sbjct: 366 QVFRTVKKTGIAPEELNLIFLGFGTMNGKDGKPFKT--REGGVMRLERLISEI-TEEVEA 422

Query: 425 MMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYA 459
            M  R   E           L    +  +  Q+ ++ VF              Y+QY   
Sbjct: 423 KMSDRDMDEEVKHKVAKQVGLAALKYGDLSNQASKDYVFDLERFTSFEGNTGPYIQYTVV 482

Query: 460 RCRSIFRQ--AKDIFPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           R RSI  +  A+      D D F  ++ + + +     EL+L+  LA++  +I+ A    
Sbjct: 483 RIRSILDKFIAEKSLNKADLDNFFADIKLVKAATASERELELV--LAKFSDMIDLAATEF 540

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+K+  Y+Y++++ F   +    EN  L   Q   RK +M++L  +     II   L++
Sbjct: 541 APHKVCAYIYEVSNCFSAFY---HENHILN-EQDEARKYSMLKLSYI--TEKIIVKCLDL 594

Query: 577 IGVESPNEM 585
           +G+E+P  M
Sbjct: 595 LGIEAPERM 603


>gi|22298368|ref|NP_681615.1| arginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|34222744|sp|Q8DKN4|SYR_THEEB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22294547|dbj|BAC08377.1| arginyl-tRNA-synthetase [Thermosynechococcus elongatus BP-1]
          Length = 584

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 235/582 (40%), Gaps = 87/582 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +N  + L++ LG  P  +A+ +V  ++++     V IAG GF+N  L P +L   L
Sbjct: 39  GDYQSNVCLSLAKQLGKAPRELAQEVVPHLEVEDLCQPVEIAGPGFLNFRLKPEFLAATL 98

Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +   S   GI   R    +  +V ++F S N    MHVGH R  ++GD +A ++ F G+
Sbjct: 99  QAARGSDRLGIPPAR----EPRRVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGH 154

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYS 218
            V R  ++ D G Q   L   +   Y  AL   N  DL +       L    K+   ++ 
Sbjct: 155 TVLRLNHVGDWGTQFGMLIAYLDEVYPDALTTANALDLGD-------LVTFYKKAKQRFD 207

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S+    PE +     K  ++Q   +  R   + L  Q     S  +F +     I D++D
Sbjct: 208 SD----PEFQQKARAKVVALQQGEEQSRRAWQLLCEQ-----SRREFQK-----IYDLLD 253

Query: 279 -NLARQGYVYEGILPPPKSKTTQKC-----DMDRKQLLFRSTMVGDDVDRPLL--KSDGS 330
             L  +G  +     P   +    C     D   K +        +   +PL+  KSDG 
Sbjct: 254 IQLTERGESFYNPFLPAVIEDLAACGLLVEDQGAKVVFLEGFTNKEGQPQPLIIQKSDGG 313

Query: 331 YTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL- 388
           Y Y   DLA  + + ++   D +IYV     S +  ++  VA         + +      
Sbjct: 314 YNYATTDLAALRYRIDKDQADWIIYVTDVGQSTHFAQVFQVAQRAGWVPPHVTLTHVPFG 373

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-----VRFMMLWRKNS-ELLD------ 436
           + L  DG   ++  R+G+ I L  ++ E  + S      R     R  S E +D      
Sbjct: 374 LVLGEDGK--RLKTRSGETIRLIDLLTEAIARSRADLEQRLATEGRTESPEFIDTVARAI 431

Query: 437 ----FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDF- 477
                 +  + +    N VF              Y+ YAY R + + R+      D+D+ 
Sbjct: 432 GIGAVKYADLSQNRNSNYVFSYDKMLSLQGNTAPYLLYAYVRVQGLTRRG-----DIDWC 486

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L P + +  E   D +E  L  HL +    ++  +    P +L  YL++L+ +F+  + 
Sbjct: 487 TLSPDSPLLLE---DETEQHLAKHLVQLEETLDLVSTELLPNRLCQYLFELSQLFNQFYD 543

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                P L   Q   +     RL L +  A  +  GL+++G+
Sbjct: 544 R---CPILSAPQPTKQS----RLTLAYLTAQTLKLGLSLLGI 578


>gi|170759904|ref|YP_001786465.1| arginyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688532|sp|B1KYT1|SYR_CLOBM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169406893|gb|ACA55304.1| arginine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 563

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 136/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTVLIKDVLEKVLNEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKNPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KKLEDGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ DD + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDDYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AMYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L D +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKDKEGTAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|218903314|ref|YP_002451148.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218537001|gb|ACK89399.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 562

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 139/621 (22%), Positives = 252/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N+Y +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 181 ----------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHFN----QFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    D     + ++  +      V  +VG  +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDHSWNVLKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|309810103|ref|ZP_07703949.1| arginine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169602|gb|EFO71649.1| arginine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 558

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            DD +  L LKSDG+  Y   DL A    K E  F   +YV G++ SG+ K+L+ V   +
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 345

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410
                Q ++       + ++G   K+S R G+ + L                        
Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466
              V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI R
Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     D    L            D     +   +A++P +I+ A    EP  +A Y  
Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P EM
Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558


>gi|50284829|ref|XP_444842.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524144|emb|CAG57735.1| unnamed protein product [Candida glabrata]
          Length = 605

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 229/555 (41%), Gaps = 105/555 (18%)

Query: 83  IAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           +A   F+  ++ P YL  K+L  I+     YG+  + K  KV IEF S N   P H GH 
Sbjct: 104 VANGPFLQFFIEPHYLTGKLLPKILEERERYGQIPLVKDKKVLIEFSSPNIAKPFHAGHL 163

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-QQALYNNDSDLPEGY 200
           R  ++G  L++L    G+ VT+  Y+ D G Q   LA+  F RY  + +   D+     +
Sbjct: 164 RSTIIGGFLSNLFQNFGWNVTKMNYLGDWGKQFGVLAVG-FERYGDEKMLETDAI---NH 219

Query: 201 YPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQAM----------MKIIRD 247
              VY+K + K++ ++ SS    L++   +++   +++    A+          ++  ++
Sbjct: 220 LFEVYVK-INKDIENEKSSNGKSLIDEQAKEYFCKLENNDTDAIKLWKKFRNLSIRKYKE 278

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               LNI +D++  E    +     I  + + L   G + E       S   +  D+ + 
Sbjct: 279 TYSKLNIDYDVYSGESQVSK---ETILLVNNMLQASGLLKE-------SNGAKVVDLSKA 328

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKR 366
           Q    + +V         KSDG+  Y   D+A   + K E  FD MIYV+ S    ++K+
Sbjct: 329 QKSLGAVVVQ--------KSDGASLYITRDIAAAIERKREYNFDKMIYVVASQQDLHMKQ 380

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L  +   + E K +    L  +      GM   MS R G  I L ++++E     +  M 
Sbjct: 381 LYQI---LKELKFEWATSLEHI----NFGMVQGMSTRKGTVIFLDNILEEAQQQMLSVM- 432

Query: 427 LWRKNSELLDFDFCKVKEQS--------------------KENPVF-------------- 452
              KN    D  F +VK  S                    K N  F              
Sbjct: 433 --SKN----DVKFTQVKNPSEIAYLIGTSAVMIQDMQSKRKNNYKFKWERMLTFEGDTGP 486

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIE 510
           Y++YA++R +SI  + K +   L     P N  +I ++   D     L+  ++ Y  V++
Sbjct: 487 YLEYAHSRLKSIELKNKHLHESLT----PVNYELIGEQDALD-----LVRVMSRYHEVLK 537

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   +EP  L  YL+ +A      +       R  +V      +   RL L  A   I+
Sbjct: 538 KALETREPSTLVTYLFKIAHQVSKCY-------RTVWVSGQPDDVAKARLHLFMASRQIL 590

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV   + M
Sbjct: 591 YNGLKLLGVTPVDRM 605


>gi|170584080|ref|XP_001896849.1| arginyl aa-tRNA synthetase protein 1, isoform b [Brugia malayi]
 gi|158595812|gb|EDP34311.1| arginyl aa-tRNA synthetase protein 1, isoform b, putative [Brugia
           malayi]
          Length = 732

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 140/615 (22%), Positives = 262/615 (42%), Gaps = 106/615 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVF------- 82
           I+I   +    G    N++M +++ L  +   I+   VAR  +D  P+ D +        
Sbjct: 163 ILITETQQIKFGDYQFNSSMSIAQKLLRNGQKISPQEVARKILDNLPECDRIEKAIKLIM 222

Query: 83  -IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            ++G G+IN++L+ S++   +++I + GIE     + +  +V ++F S N    MHVGH 
Sbjct: 223 EVSGPGYINIFLNRSWIATSITNIALKGIEVP---VIEKRRVLVDFSSPNIAKQMHVGHL 279

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R  ++GD+++ L+ + G++V R  +I D G Q   L   +    Q    N  +++P    
Sbjct: 280 RSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHL----QDCFPNFINEVP---- 331

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           P   L+   KE   +       F E++         V  +     D LKA  +  D+   
Sbjct: 332 PISDLQAFYKESKKR-------FDEDEAFKARAYQCVTKLQSFDPDFLKAWQMICDV--- 381

Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCD------MDRKQLLFRST 314
                R D S I D +D N+  +G   E        +  ++ D      +D  + + +  
Sbjct: 382 ----SRKDFSQIYDRLDINIVERG---ESFYQKHMVELVEELDKLGVLELDEGRKILK-- 432

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
            + + V   ++KSDG +TY  +DLA  K + +    D +IYV+ +  S + + L A    
Sbjct: 433 -LSEGVPLTVVKSDGGFTYDTSDLAALKYRLFVDKADWIIYVVDAGQSLHFELLYAAGQK 491

Query: 374 V-----SEKKAQI---NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +     SEK+ ++    ++L E  +        K   R+GD + L  ++DE         
Sbjct: 492 LGWYSPSEKRVELVSFGLVLGEDKK--------KFKTRSGDSVRLTDLLDEGVKRAEAKL 543

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               V    V++  L +  ++   F F ++ +  + N   Y+ Y
Sbjct: 544 QEKERDKVMIPEELALARDAVAYGCVKYADLSQTRTQDYVFSFDRMLD-DRGNTAVYLLY 602

Query: 457 AYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           A+AR +SI R +     D+       P  ++P E +   SE +L   + ++   I N   
Sbjct: 603 AFARIQSICRNSGVSEEDIHNYLQSLPNGLLPLEHK---SEFRLAKTILKFTDCILNTLD 659

Query: 515 AQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
               ++L  Y+Y LA+ FH  ++      ++   + F   +    T  RL L    A+I+
Sbjct: 660 NFLLHQLCDYVYSLATTFHDFYNECYVIQKDTDGMYFALISLAINT--RLVLCKVTAAIM 717

Query: 571 NSGLNIIGVESPNEM 585
                I+G+++  +M
Sbjct: 718 ADCFKILGLKTVEKM 732


>gi|254171817|ref|ZP_04878493.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033713|gb|EEB74539.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 640

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 67/381 (17%)

Query: 16  KEIDCKIKVE-KKILDRIVIERPRD------------CAHGHLSTNAAMILSRPLGLDPL 62
           KEI  + ++  KK LD ++ E  ++               G   T  A  L+R     P 
Sbjct: 4   KEIQERARLSLKKALDEMLTEAGKEWDGEITFDDTPSLELGDFGTAIAFQLARVFRKAPK 63

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGT 121
            IAE +V RI+  P+      A  G+IN Y+  SY  R+++  I+  G  YG + IG+  
Sbjct: 64  LIAEELVERIE-KPEGIVEVKAVNGYINFYVDYSYFGRELVGEILGKGEAYGESEIGRDK 122

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +E  S NPT P+H+GH R AV+GDT+A +M   GY+V  + YI+D G Q       V
Sbjct: 123 KVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKVEVQNYIDDLGVQF----AQV 178

Query: 182 FWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            W Y   ++     +++L E      ++ HV   L  + +  +   PE        D  V
Sbjct: 179 LWGYLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKRIEENPE-------VDKEV 231

Query: 239 QAMMKIIRDD---------------LKA-------LNIQHDIFISEDDFHRGDPSPIRDI 276
           + +MK + +                +KA       + I +D+   E D  R        I
Sbjct: 232 RELMKKLEEGNNEIAEIGRKLAERVVKAQMLTTYRMGIAYDLLSWESDIMRS------GI 285

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTY 333
            +   +     E      + K      MD ++L         ++  P L   +SDG+ TY
Sbjct: 286 FEEAYQLIESNENFFWGKEGKYKGAFVMDLRKLF-------PEMKNPFLVLKRSDGTATY 338

Query: 334 FAADLAYFKCKYERGFDNMIY 354
              D+AY   K+ +   +M+Y
Sbjct: 339 TGKDIAYHLWKFGKVKADMLY 359



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + + VG  +VRF ++     +++ F +  V     E+   Y+QYA+ARC SI R+A +  
Sbjct: 478 IAEAVGVGAVRFNLVKYSPDKVITFRWEDVLNFEGESAP-YIQYAHARCASILRKAGESG 536

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            + D+           S+    E +LI  LA++P VIE+A    +P+ +  YL +LAS+F
Sbjct: 537 VETDWKALLEKA--DFSKLTLREKELIKLLAKFPEVIESAGRDIKPHLVPAYLNELASLF 594

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +    ++P L+  +    +    RL LV AV  ++ +GL ++G+E+P +M
Sbjct: 595 NKFYM---DHPVLKAEEGVKEE----RLLLVLAVKQVLRNGLELLGIEAPEKM 640


>gi|52143263|ref|YP_083566.1| arginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81688178|sp|Q63C01|SYR1_BACCZ RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|51976732|gb|AAU18282.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 562

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 138/621 (22%), Positives = 254/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 181 ----------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEIKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    +     + ++  +      V  +VG+ +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|328851981|gb|EGG01130.1| hypothetical protein MELLADRAFT_45216 [Melampsora larici-populina
           98AG31]
          Length = 623

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 220/554 (39%), Gaps = 110/554 (19%)

Query: 84  AGKGFINLYLSPSYLRKILSSIV-----VSGIEYGRNL------IGKGTKVNIEFVSANP 132
           A   FIN  +    L K++ S +     +S   YG N       +G+  K+ +EF S N 
Sbjct: 112 ANGSFINFQIRSKTLAKVVLSQINDLTHISKSSYGSNTSGYDSTLGRKKKLILEFSSPNI 171

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
               H GH R  ++G  L +L   +G++VTR  Y+ D G Q   LA+  F RY     N 
Sbjct: 172 AKKFHAGHLRSTIIGAFLGNLHEANGWDVTRINYLGDWGRQFGVLAVG-FERYGSE--NE 228

Query: 193 DSDLPEGYYPGVY------LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            ++ P  +   VY      ++   KE  ++ + +     E+       D +  A+ K  R
Sbjct: 229 LTEQPIQHLLDVYTRINRDMEGGEKEALEQKARDFFKLMED------GDSTAVALWKRFR 282

Query: 247 D--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           D        D   LNI+ D++  E          +   ++ L ++G   E          
Sbjct: 283 DYSIKQYEADYARLNIKFDVYSGESQV---SIESMDSALEILKQKGIAIE-------DNG 332

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
           T  CD+D+ +L       G  V R   K+DG+  Y   D+     +YE+  FD MIYV+ 
Sbjct: 333 TLICDLDKYKL-------GRTVIR---KNDGTNLYITRDIGAAIQRYEQYKFDKMIYVVA 382

Query: 358 SDH----SGYVKRLE---------------AVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           S      + + K LE                + A +S +K   +V L +++   R+ M  
Sbjct: 383 SQQDLHLAQFFKVLELMEFEWAKRLVHINFGMVAGMSTRKG-TSVHLEDMMNEARNTMHE 441

Query: 399 KMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454
           +M K    +  +       DEVG   ++   +  K     +F + +V   +    P  Y+
Sbjct: 442 QMLKNEDKYKEIPDPMGTADEVGLSGIKIQDMAGKRINGYEFKWDRVLSFEGDTGP--YL 499

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-----------ELQLIVHLA 503
           QYA+ R  S+ R+A            P +V+PQ  +  T+              L++ LA
Sbjct: 500 QYAHVRLCSVERKAG-----------PAHVLPQPDQLATTINTDLICEDPKARDLLMLLA 548

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            YP  ++ A +  EP  +  Y + L       W           V+    ++ + RL + 
Sbjct: 549 CYPDAVKLAFLKLEPSSIVTYCWKLTHAVSSAW-------ETLIVRGQTPEMALARLWVF 601

Query: 564 HAVASIINSGLNII 577
            A   ++ S + ++
Sbjct: 602 RACKDVLASAMKLL 615


>gi|309808155|ref|ZP_07702067.1| arginine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|312875062|ref|ZP_07735080.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|308168624|gb|EFO70730.1| arginine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|311089457|gb|EFQ47883.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 558

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            DD +  L LKSDG+  Y   DL A    K E  F   +YV G++ SG+ K+L+ V   +
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYNFAMSLYVAGNEQSGHFKQLKQVLGKM 345

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410
                Q ++       + ++G   K+S R G+ + L                        
Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466
              V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI R
Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     D    L            D     +   +A++P +I+ A    EP  +A Y  
Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P EM
Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558


>gi|257876610|ref|ZP_05656263.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257810776|gb|EEV39596.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 563

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 251/596 (42%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I      + + + G  ++N +
Sbjct: 27  LLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-QASFEKIEVVGP-YLNFF 83

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +   +L  ++     +G   IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MDKKAISAHVLEMVLKEKNHFGDQTIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209
            ++   GY+  R  ++ D G Q   L ++   W  ++A+     ++L   Y         
Sbjct: 144 FILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAEPINELLRLYVDFHEAAET 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFH 266
            K+L D   +         W   ++D   +AM   +  RD+ LK  N  +D+   E  F 
Sbjct: 204 DKQLEDDARA---------WFKKLEDGDQEAMDLWQWFRDESLKEFNKIYDML--EVSF- 251

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321
                      D+L  + +           K T+  ++  ++ L +     + VD     
Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLKEDQGAEIVDLAAYD 292

Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370
             P L  KSDG+  Y   D+A   Y K  Y   F   +YV+G++ S + K+L+AV     
Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K +I VLL E++    D    +++++         
Sbjct: 351 FEWADDMTHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIDSAKEQITEKNPTLENKEA 409

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY++AR  SI  +A 
Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKA- 464

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                 DFD      +   S  DT   ++I  +  YP  +  A    EP  +A +   LA
Sbjct: 465 ------DFD---PAAVSSLSLADTESWEVIKLIQRYPETVLQAAEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++      ++ +  +  K    RL LV+AV +++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAN------VKILAEDAEKDA--RLALVYAVTTLLKEDLRLLGLHAPDKM 563


>gi|86741395|ref|YP_481795.1| arginyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568257|gb|ABD12066.1| arginyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 598

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 151/639 (23%), Positives = 253/639 (39%), Gaps = 107/639 (16%)

Query: 6   DFSSRLKNYLKEID-CKIKVEKKILDRIVIERP------RDCAHGHLSTNAAMILSRPLG 58
           DFS   +     I+  +I V   I DR++ E        R   H    +NAA+ L++   
Sbjct: 8   DFSVTAQTVRSLINQVEIAVSAAI-DRVLPEAAGADPVVRPSEHADFQSNAALALAKRAR 66

Query: 59  LDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             P  +A  +   ++ D    V  V ++G GF+NL L+ + +   +++  ++    G +L
Sbjct: 67  TKPADLATAVADALRADGSTAVADVTVSGPGFLNLALADATVWTQVAA-RLADPRLGIDL 125

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  +  I++   N    MHVGH R  ++GD LA ++ F G EV R+ ++ D G Q   
Sbjct: 126 PEQSRRTVIDYSGPNIAKEMHVGHLRTTIIGDALARVLGFLGAEVIRQNHLGDWGTQFGM 185

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKE------LADKYSSELLNFPE 226
           L +     +  A +++D DL  G      L    +   KE       AD+  + ++    
Sbjct: 186 L-IQYLDEHPDATWHSD-DLAPGTSTVSALDSLYRAARKEFDADPGFADRARARVVALQA 243

Query: 227 ------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                  +W  IV +  V    + I D L  L    D   + + F+      + DI+D L
Sbjct: 244 GDEDTVARWREIVAESEV--AFRQIYDRLGVLLEPSD--SAGESFYN---DRLLDIVDEL 296

Query: 281 ARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
              G     EG L     + T   D D   L+ R             K+DG Y Y   DL
Sbjct: 297 TAAGIAQDSEGALVVLSQEVTGP-DGDPATLMVR-------------KTDGGYGYDTTDL 342

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGM 396
           A  + +  +   D ++YV+ +  + + + +   A         ++V        L  DG 
Sbjct: 343 ATIRYRIRDLHADRLLYVVDARQALHFRLVFETARRAGWLTDAVDVAHVAFGTVLGPDGR 402

Query: 397 PIKMSKRAGDFITLR---------------------------HVVDEVGSDSVRFMMLWR 429
           P K   RAGD + L                            H+ +  G  +V++  L  
Sbjct: 403 PFK--TRAGDTVKLMDLLDAATGKARATVAEKDHALTDDDLDHIAEAAGIGAVKYADLST 460

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             ++   FD  ++        V Y+QYA+ R +SI R+A D+   +D  L          
Sbjct: 461 SRTKDYVFDVDRMVSFDGNTGV-YLQYAHTRIQSILRKAGDMTATVDVAL---------- 509

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLR 546
               +E  L + L  +   +       EP++L  YLY+LA  F   +      + +P  R
Sbjct: 510 ALHPAERALALQLDAFGGALTEVARLLEPHRLCNYLYELARAFTDFYEACPVLQADPSTR 569

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              AN       RL L H  A  +  GL+++G+ +P  M
Sbjct: 570 ---AN-------RLALCHLTARTLRQGLDLLGIAAPERM 598


>gi|152978766|ref|YP_001344395.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704277|sp|A6VNB3|SYR_ACTSZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150840489|gb|ABR74460.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 575

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 134/595 (22%), Positives = 230/595 (38%), Gaps = 108/595 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  + +D   + + IAG GFIN++LS ++L    
Sbjct: 37  GDYQANGIMGAAKKLGLNPREFAQKVLDNLNLDGIAEKLEIAGPGFINIFLSKNWLV-CH 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +  ++S + +G     K   + +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 96  ADEMLSAVNFGIK-TAKPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ND    E      
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENENASAMQLSDLEAFYRAAKEHYDNDEAFAEK----- 209

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                    A  Y  +L +  E  +  I+    V   M+  +++   LN+       +D 
Sbjct: 210 ---------ARNYVVKLQSGDE--YCRIMWKKLVDITMRHNQENYDRLNV---TLTEKDV 255

Query: 265 FHRGDPSP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 +P + +I+ +L +QG   E  G L     +   K               GD + 
Sbjct: 256 MGESLYNPMLPEIVADLKKQGLAVEDDGALVVYLDEFKNKD--------------GDPMG 301

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG----SDHSGYVKRLEAVAAAVSEK 377
             + K DG Y Y   D+A  K +  +   + + V      S H      +   A  V + 
Sbjct: 302 VIVQKKDGGYLYTTTDIAAAKYRCHKLHADRVLVFSDSRQSQHMQQAWLITRKAGYVPDS 361

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            +  +     +  L +DG P K   R G  + L+ ++DE                     
Sbjct: 362 FSLEHPFFGMM--LGKDGKPFKT--RTGGTVKLKDLLDEAVERADKLIAERNPDLTAEEK 417

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +A  
Sbjct: 418 AAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFARAGI 476

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               L+ D+            D  E  L++ L ++   +        P+ L  YLY+LA 
Sbjct: 477 EPNSLNDDIVLT---------DDKERVLVIKLLQFEEALNGVAKDGMPHILCQYLYELAG 527

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F   +      P L       R +   RL+L    A  +  GL+++G+++  +M
Sbjct: 528 MFSAFY---EACPILN----AERPIKNSRLKLAALAAKTLKQGLDLLGIKTVEKM 575


>gi|39932107|sp|Q7VP38|SYR_HAEDU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33147727|gb|AAP95249.1| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 561

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 130/561 (23%), Positives = 238/561 (42%), Gaps = 74/561 (13%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P   A+ I+  + +   VD + IAG GFIN++L PS+L K  ++  +  + +G      
Sbjct: 40  NPREFAQKILDNLDVSDMVDKLEIAGPGFINIFLKPSWLAK-QANFALQAVNFGIKTAQP 98

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-A 178
            T + I++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L A
Sbjct: 99  QT-ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIA 157

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  +QA     SDL E +Y         +   + Y S+ + F E+    +VK  S 
Sbjct: 158 YLEKMENEQASEMQLSDL-EAFY---------RAAKESYDSDQI-FAEKARNYVVKLQSG 206

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSK 297
               + +   L  + + H+    ++++ R + +   +D++        +Y  +LP   + 
Sbjct: 207 DEYCRTMWKKLVDITMHHN----QENYDRLNVTLTEKDVMGE-----SLYNPMLPEIVAD 257

Query: 298 TTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
              K    + +   ++F        GD +   + KSDG + Y   D+A  K +YE    D
Sbjct: 258 LKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVD 317

Query: 351 NMIYVMGSDHSGYV-------KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS 401
             +    S  + ++       ++   V A+ S +     ++L +  + +  R G  +K+ 
Sbjct: 318 RALVFSDSRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLGKDGKPFKTRSGGTVKLK 377

Query: 402 -------KRAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                  +RA   I+ R           VV+ V   SV++  L +  +    FD+  +  
Sbjct: 378 DLLDEAVERADKLISARSTNLTVAEKSAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML- 436

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+QYAY R RSIF +A         ++ P  +  +    +  E  L + L +
Sbjct: 437 TFEGNTAPYMQYAYTRIRSIFARA---------EIDPDTLTGEMQLTEEKERTLALKLLQ 487

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   +        P+ L  YLY+LA +F   +      P L   +A    +   RL+L  
Sbjct: 488 FEEALTAVAKEGMPHILCQYLYELAGIFSSFY---EACPMLNADEA----IKHSRLRLAS 540

Query: 565 AVASIINSGLNIIGVESPNEM 585
             A  +  GL+++G+++  +M
Sbjct: 541 LTAKTLKQGLDLLGIKTVEKM 561


>gi|109894992|sp|Q2J9H6|SYR_FRASC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 588

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 238/600 (39%), Gaps = 99/600 (16%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSP 95
           R   H    +NAA+ L++     P  +A  +   ++ D    V  V ++G GF+NL L+ 
Sbjct: 36  RPSEHADFQSNAALALAKRARTKPADLATAVADALRADGSTAVADVTVSGPGFLNLALAD 95

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           + +   +++  ++    G +L  +  +  I++   N    MHVGH R  ++GD LA ++ 
Sbjct: 96  ATVWTQVAA-RLADPRLGIDLPEQSRRTVIDYSGPNIAKEMHVGHLRTTIIGDALARVLG 154

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL----KHVGK 211
           F G EV R+ ++ D G Q   L +     +  A +++D DL  G      L    +   K
Sbjct: 155 FLGAEVIRQNHLGDWGTQFGML-IQYLDEHPDATWHSD-DLAPGTSTVSALDSLYRAARK 212

Query: 212 E------LADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           E       AD+  + ++           +W  IV +  V    + I D L  L    D  
Sbjct: 213 EFDADPGFADRARARVVALQAGDEDTVARWREIVAESEV--AFRQIYDRLGVLLEPSD-- 268

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            + + F+      + DI+D L   G     EG L     + T   D D   L+ R     
Sbjct: 269 SAGESFYN---DRLLDIVDELTAAGIAQDSEGALVVLSQEVTGP-DGDPATLMVR----- 319

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                   K+DG Y Y   DLA  + +  +   D ++YV+ +  + + + +   A     
Sbjct: 320 --------KTDGGYGYDTTDLATIRYRIRDLHADRLLYVVDARQALHFRLVFETARRAGW 371

Query: 377 KKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLR------------------------ 411
               ++V        L  DG P K   RAGD + L                         
Sbjct: 372 LTDAVDVAHVAFGTVLGPDGRPFK--TRAGDTVKLMDLLDAATGKARATVAEKDHALTDD 429

Query: 412 ---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
              H+ +  G  +V++  L    ++   FD  ++        V Y+QYA+ R +SI R+A
Sbjct: 430 DLDHIAEAAGIGAVKYADLSTSRTKDYVFDVDRMVSFDGNTGV-YLQYAHTRIQSILRKA 488

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            D+   +D  L              +E  L + L  +   +       EP++L  YLY+L
Sbjct: 489 GDMTATVDVAL----------ALHPAERALALQLDAFGGALTEVARLLEPHRLCNYLYEL 538

Query: 529 ASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F   +      + +P  R   AN       RL L H  A  +  GL+++G+ +P  M
Sbjct: 539 ARAFTDFYEACPVLQADPSTR---AN-------RLALCHLTARTLRQGLDLLGIAAPERM 588


>gi|127511312|ref|YP_001092509.1| arginyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166232841|sp|A3Q9V2|SYR_SHELP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126636607|gb|ABO22250.1| arginyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 581

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 133/609 (21%), Positives = 243/609 (39%), Gaps = 110/609 (18%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D  HG  +TN AM+L++    +P  +A+LI+  +  +  V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKTHGDFATNLAMMLTKVARKNPREVAQLIIDSLPQNSQVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L +  +S    G  L    T V +++ S N    MHVGH R  ++GD +
Sbjct: 89  FFIDENALTNQLMA-ALSDDHLGVTLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDAV 146

Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190
              + F G++V R+ ++ D G                    AQ+    L  F+R  +  +
Sbjct: 147 VRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRF 206

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           +   +        V     G E  +K   E  +        + +   V     + R D++
Sbjct: 207 DESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGV----SLTRADVR 262

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
             +  +D               +  ++ +L  QG + E       S   +    D  Q  
Sbjct: 263 GESAYND--------------DLEQVVRDLDAQGLLSE-------SNGAKVVFQDEFQ-- 299

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEA 369
              T  G+ +   + K+DG + Y  +DLA  + +      D  +Y +    + + +++ +
Sbjct: 300 ---TKEGEPLPVIIQKADGGFLYATSDLAAMRYRSNVLKADRALYFVDLRQALHFQQVFS 356

Query: 370 VAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           +A   +  + ++++       +   DG P K   R+G  + L   VD +     R + L 
Sbjct: 357 LARTANFVRPELSLEHMGFGTMNGEDGRPFKT--RSGGVVKL---VDLLSEAETRALELV 411

Query: 429 R-KNSELLDFDFCKVKEQSKENPVFYVQYA------------------------------ 457
           R KN ++ + +  K+   +K   +  V+YA                              
Sbjct: 412 RSKNPDMDEEELAKI---AKVVGIASVKYADLSKNRASDYIFSFEQMLSFEGNTAPYLLY 468

Query: 458 -YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            Y R   IF++A +I      DL   ++   + E D  E +L   LA++  V+       
Sbjct: 469 AYTRVAGIFKRAAEI------DLTGASI---KLEHD-KEKELGNKLAQFAEVLGRMVAKG 518

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P+ L  YL++LA  F   +      P L     + +K    RL L    A  +  GL++
Sbjct: 519 QPHALCGYLFELAGAFSSFY---EACPVLAADSEDEKK---SRLLLAQLTAKTLKQGLDL 572

Query: 577 IGVESPNEM 585
           +G+E+   M
Sbjct: 573 LGIETLERM 581


>gi|326572757|gb|EGE22743.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 575

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGMNPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISKHANQANISRTLGVNTAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYAFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FVRAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|229085154|ref|ZP_04217401.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228698135|gb|EEL50873.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 562

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 241/599 (40%), Gaps = 109/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P+    G  +    M L++     P  IA+ +   +      DS F   +  +  Y
Sbjct: 27  LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEVAENLN-----DSFFTKVEA-VGPY 79

Query: 93  LSPSYLRKILSSIVVSGI-----EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++  + R I+S  V+  I     EYG+   G+   V I++ S N   P  +GH R  ++G
Sbjct: 80  VNVFFNRHIVSDDVLKMILAEKEEYGQGHFGQEKTVVIDYSSPNIAKPFSMGHLRSTMIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           ++L  +    GYEV    YI D G Q   L ++ + ++       +  + E +   V+  
Sbjct: 140 NSLKHIAEKCGYEVVGINYIGDWGTQFGKL-ITAYKKWGNEELVKEDPIRELFKLYVHFH 198

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFISEDD 264
              KE  +      L      W   ++D   +A+        + LK  +  +++   E  
Sbjct: 199 EEVKENPE------LEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLGVEFT 252

Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             +G+      + D ++ L  +G + E       S   Q  +++++ +            
Sbjct: 253 NFQGEAFYNDKMDDFVEILEEKGLLEE-------SDGAQVVNLEKEDM------------ 293

Query: 322 RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS- 375
            P L  KSDG+  Y   DL    Y +  YE  FD  +YV+G++ S +  +   V   +  
Sbjct: 294 PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLKKLGY 351

Query: 376 ---EKKAQINVLLCELVRLYRDGMPIKMSKRAG-------------------------DF 407
              +  A +   L     + +DG   KMS R G                         D 
Sbjct: 352 NWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAIMLAKQNIEEKNPDL 404

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466
                V  +VG  +V F  L  +    ++F   K +K + +  P  YVQY +AR  SI R
Sbjct: 405 KQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQYTHARACSILR 462

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +    F    F L            D      I  L  +P+VIE A    EP  +A YL 
Sbjct: 463 KENVEFETESFALN-----------DDHSWSTIKLLNRFPKVIETAFSKNEPSHIAKYLL 511

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           D+A  F+ ++ +      +R ++ N  K +  RL LV+AV  ++  GL ++G+ +P EM
Sbjct: 512 DVAQAFNKYYGN------VRILENNEEKES--RLALVYAVIVVLKEGLRLLGMGAPEEM 562


>gi|300118117|ref|ZP_07055865.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724428|gb|EFI65122.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 562

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 141/616 (22%), Positives = 250/616 (40%), Gaps = 91/616 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLYNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFAKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDS---------DLPEGYYPGVYLKHVGK------ELADKYSSELLN-FPEEK 228
             +A+   D             E       L+  G+      E  D+ + EL N F  E 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDGELEEDGRAWFKKLEEGDEEAVELWNWFRHES 236

Query: 229 WLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                + Y +          +A    + +D   +  +HD+    +            +I 
Sbjct: 237 LKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG----------ALIV 286

Query: 279 NLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           NL  +G      +PP         T     D    L+R    G D    ++  + S  + 
Sbjct: 287 NLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHF- 339

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
                +F    + G++   +V G +H   G++ +       +S +K ++ +LL E++   
Sbjct: 340 ---NQFFTVLKKLGYN---WVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEEVLEEA 389

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKEN 449
            +     + ++  +      V  +VG  +V F  L  KN  + + +F     +K + +  
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETG 447

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P  YVQY +AR  SI R+    F    F L            D     ++  L ++P VI
Sbjct: 448 P--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNKFPEVI 494

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A    EP  ++ Y+ D+A +F+ ++ +      +R +  N  K +  RL LV+AV  +
Sbjct: 495 EAACNKNEPSVISKYVLDVAQLFNKYYGN------VRILDENAEKDS--RLALVYAVTVV 546

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++GVE+P EM
Sbjct: 547 LKEGLRLLGVEAPEEM 562


>gi|221134747|ref|ZP_03561050.1| arginyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 577

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 132/588 (22%), Positives = 246/588 (41%), Gaps = 91/588 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ L   P  +A+ I+  + +D   +   IAG GFIN++LS  +L +  
Sbjct: 36  GEYQFNGAMGLAKRLRCSPRDVAQQILDVVDLDGIAEQCEIAGPGFINIHLSSQWLAQQA 95

Query: 103 SSIVVS---GIEYG--RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           S ++     GIE    +N++       +++ + N    MHVGH R  ++GD +A  + F 
Sbjct: 96  SRVLADERLGIETQPQQNIV-------VDYSAPNLAKEMHVGHLRSTIIGDAVAKALEFM 148

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKE-LA 214
           G+ V R+ ++ D G Q   L   +  + Q  +      SDL E +Y    ++   +E  A
Sbjct: 149 GHNVLRQNHMGDWGTQFGMLLAHLNDKLQANEVAETALSDL-EDFYRQAKVRFDAEEGFA 207

Query: 215 DKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           D+    ++     ++  L + +++ +   +    +  + LN+       E        +P
Sbjct: 208 DRAREYVVKLQGGDDACLALWQNF-IDVSIAHSEEVYEKLNVS---LTREHVMGESAYNP 263

Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----KS 327
            + ++I +L  QG   E                   Q++F   +  D   +P +    KS
Sbjct: 264 DLANVISDLQAQGVAVEDA---------------GAQVVFLDEL-ADKNGKPAVYIVQKS 307

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G Y Y   DLA  + + ++      +    +  + + K+ E VA       A      C
Sbjct: 308 GGGYLYATTDLAAIRYRKQQLAAHRTLIFTDARQALHFKQTEIVARKAGFLAADEQYQHC 367

Query: 387 EL-VRLYRDGMPIK-----------------------MSKRAGDFI--TLRHVVDEVGSD 420
              + L +DG P K                       ++ R  DF   TL  + +++G  
Sbjct: 368 PFGMMLGKDGKPFKTRTGGTVKLIDLLDEAVERAQTLLATRDNDFSADTLADMANKIGIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    FD+       + N   Y+QYA+ R +SIF +A     ++  +  
Sbjct: 428 AVKYADLSKNRTTDYIFDW-DAMLSFEGNTAPYLQYAFTRIQSIFNKA-----NVTLENC 481

Query: 481 PRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
             N++   PQE    T  LQ       Y   +E       P+ L  YLY+LAS++   + 
Sbjct: 482 RENIVINAPQEKALATKLLQ-------YQDTLEQMAHEATPHVLCTYLYELASLYMKFY- 533

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                P L+   + + K +  RL L    ++ ++ GL+++G+ + ++M
Sbjct: 534 --EACPILKDDVSESDKAS--RLALCALCSNTLSHGLDVLGIATLDKM 577


>gi|161511522|ref|NP_872860.2| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 575

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 130/561 (23%), Positives = 238/561 (42%), Gaps = 74/561 (13%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P   A+ I+  + +   VD + IAG GFIN++L PS+L K  ++  +  + +G      
Sbjct: 54  NPREFAQKILDNLDVSDMVDKLEIAGPGFINIFLKPSWLAK-QANFALQAVNFGIKTAQP 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-A 178
            T + I++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L A
Sbjct: 113 QT-ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIA 171

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  +QA     SDL E +Y         +   + Y S+ + F E+    +VK  S 
Sbjct: 172 YLEKMENEQASEMQLSDL-EAFY---------RAAKESYDSDQI-FAEKARNYVVKLQSG 220

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSK 297
               + +   L  + + H+    ++++ R + +   +D++        +Y  +LP   + 
Sbjct: 221 DEYCRTMWKKLVDITMHHN----QENYDRLNVTLTEKDVMGE-----SLYNPMLPEIVAD 271

Query: 298 TTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
              K    + +   ++F        GD +   + KSDG + Y   D+A  K +YE    D
Sbjct: 272 LKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVD 331

Query: 351 NMIYVMGSDHSGYV-------KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS 401
             +    S  + ++       ++   V A+ S +     ++L +  + +  R G  +K+ 
Sbjct: 332 RALVFSDSRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLGKDGKPFKTRSGGTVKLK 391

Query: 402 -------KRAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                  +RA   I+ R           VV+ V   SV++  L +  +    FD+  +  
Sbjct: 392 DLLDEAVERADKLISARSTNLTVAEKSAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML- 450

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+QYAY R RSIF +A         ++ P  +  +    +  E  L + L +
Sbjct: 451 TFEGNTAPYMQYAYTRIRSIFARA---------EIDPDTLTGEMQLTEEKERTLALKLLQ 501

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   +        P+ L  YLY+LA +F   +      P L   +A    +   RL+L  
Sbjct: 502 FEEALTAVAKEGMPHILCQYLYELAGIFSSFY---EACPMLNADEA----IKHSRLRLAS 554

Query: 565 AVASIINSGLNIIGVESPNEM 585
             A  +  GL+++G+++  +M
Sbjct: 555 LTAKTLKQGLDLLGIKTVEKM 575


>gi|31747865|gb|AAN10190.1| argynyl tRNA synthetase [Candidatus Fritschea bemisiae]
          Length = 578

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 245/583 (42%), Gaps = 82/583 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N+AM L++     P  IAE IV    +D  V+ + +AG GF+N+ L   +L + L
Sbjct: 38  GHYQCNSAMELAKKTSRHPREIAEQIVKNWGLDERVEKLEVAGPGFVNITLKKEFLDQEL 97

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + +       G + + K  K+ +EF S N    +HVGH R  ++G++LA L  F G++V 
Sbjct: 98  NRLATDR-RLGASPLKKRKKIIVEFSSPNIAKELHVGHLRSTIIGESLARLFEFLGHQVL 156

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSE 220
           R  +I D G Q   L ++    +Q+ + + +  +DLP               L D Y   
Sbjct: 157 RLNHIGDWGTQFGML-IAYLKEFQKEVLSGEKKADLP--------------ALMDWYRES 201

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN- 279
              F      P  K  +   ++ + + + +AL +   I     +  R     I D +D  
Sbjct: 202 KKLFDTN---PAFKKRAQIEVVNLQKKEKEALAVWETI----REISRKGFQEIYDWLDVS 254

Query: 280 -LARQGYVYEGILPPPKSKTTQKCDM---DRKQLLFRSTMVG-DDVDRPLL--KSDGSYT 332
            + R    Y   LP    +   K  +   D  + +F     G D    PL+  KSDG Y 
Sbjct: 255 LIERGESYYNETLPKVIEEYEAKGIIQISDGAKCVFLEGFKGKDQAPLPLILQKSDGGYN 314

Query: 333 YFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--------AAVSEKKAQIN 382
           Y   D A  + +   E+G D ++YV+ +    + + + A A        A V  +     
Sbjct: 315 YATTDTAALFQRIHIEKG-DRILYVVDAGQRLHFQMVFAAAFKAGYYDPARVEIEHVPFG 373

Query: 383 VL-----------------LCELVR--LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V+                 L +L++  +YR  + +K    + +   L  +   +G +SV+
Sbjct: 374 VVLGADGKKFKTRSGQTEKLIDLLKEAVYRAKILLKNRLPSVEEKDLEKLAKILGINSVK 433

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           +  L      L D+ F   +  + E N   Y+ Y+Y R + I  +      + + DL   
Sbjct: 434 YADL--SCHRLKDYIFNYDRMLNFEGNTAAYLLYSYVRIQGIKEKC-----NRNIDLLSH 486

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +   Q +    +E+ L + L ++   +        P +L+ YLY LA  FH  +   R  
Sbjct: 487 SARIQLTH--PTEIALGLKLRQFGEALTLMDRDLLPNRLSDYLYHLAEKFHAFFRDCR-- 542

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                V+ + ++ +  RL L    + I+  GL I+G+++ + M
Sbjct: 543 -----VKGSPQEDS--RLLLCELTSQILQKGLYILGLKTMDRM 578


>gi|256822588|ref|YP_003146551.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796127|gb|ACV26783.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 588

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 149/627 (23%), Positives = 255/627 (40%), Gaps = 133/627 (21%)

Query: 34  IERPRDCAH---------GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           +E PR+  +         GH   N AM  ++    +P   AE +VA +  +  ++ + + 
Sbjct: 20  LELPRELGNVQRSNRPDLGHYQCNGAMAAAKLGAGNPFVTAEKVVAALSDNSLIEKLDVV 79

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             GFIN++++   L + L S   S   +G        KV I+F   N    MHVGH R A
Sbjct: 80  RPGFINVFVNAESLAQTLES-YGSDETFGSYEDKSDCKVMIDFGGPNVAKSMHVGHLRTA 138

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-- 202
           ++GD+L  +  F GY+V  + ++ D G Q+  L +    + Q  L   D+D   G YP  
Sbjct: 139 IIGDSLQRIFRFKGYQVVSDAHLGDWGTQMGML-IEGLKKRQTDLVYFDADFS-GPYPEE 196

Query: 203 ---------GVYLKHVG--------KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                     +Y +  G         E A + + EL N     +  + K + V   +  +
Sbjct: 197 SPVTIQDLEEIYPQESGLCKSDEAVAEKARQATLELQN-GRAGYRALWKHF-VDVSVATL 254

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCD 303
           + D   L +  D++  E D    DP  I  +I  L  +G     +G L  P         
Sbjct: 255 KRDYGELGVSFDLWKGESD---ADPF-IAKVIQQLEDKGLAVRDQGALIVP--------- 301

Query: 304 MDRKQLLFRSTMVGDDVDRPLL------KSDGSYTYFAADLAYFKCKYERGFDN----MI 353
                  F+     DD D  ++      KSDG+  Y   DLA     YER +++    ++
Sbjct: 302 -------FK-----DDQDEAIMPPLILRKSDGAVMYGTTDLATL---YERVYNDHANLVL 346

Query: 354 YVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMP-------------- 397
           YV+      + K++ A A    ++   A  +     +    +DG P              
Sbjct: 347 YVVDGRQQQHFKQVFAAADLMGMNANTAYEHTYFGTVNG--KDGKPFKTRSGGVMKLHDL 404

Query: 398 IKMSKR-------AGDFIT------LRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKV 442
           I+M+K        A +F T         +  +V   +++F  L  +N  + D  FD  K 
Sbjct: 405 IQMAKEEARKKLAASNFGTEFDEDEKEEIAHKVAISTLKFADL--RNFRIKDYIFDLEKF 462

Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIV 500
            E + K  P   +Q   AR +SI R+A++          P  ++P  E+E+D     L  
Sbjct: 463 SEFEGKTGPYLLMQ--VARIKSILRKAEEAGAK------PGELMPTSENEYD-----LTF 509

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--SHGRENPRLRFVQANNRKLTMM 558
            L ++P  ++     + P+ L  +LY+LA  F   +   H    P         R+ +++
Sbjct: 510 GLLDFPVALDKTVDKRAPHYLCEHLYNLAQQFSSFYQKQHIMNEPD------KARQASLL 563

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL  +    + +  GLN++G+E+   M
Sbjct: 564 RLSQI--CLAQLEMGLNLLGIETLERM 588


>gi|196039674|ref|ZP_03106978.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029377|gb|EDX67980.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 562

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 138/621 (22%), Positives = 252/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    D     + ++  +      V  +VG  +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVMVVLKEGLRLLGVEAPEEM 562


>gi|15605181|ref|NP_219967.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|255311266|ref|ZP_05353836.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317568|ref|ZP_05358814.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|7674345|sp|O84460|SYR_CHLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3328887|gb|AAC68054.1| Arginyl tRNA Transferase [Chlamydia trachomatis D/UW-3/CX]
 gi|296436909|gb|ADH19079.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748585|gb|ADI51131.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749465|gb|ADI52143.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 563

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 142/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L   L
Sbjct: 39  GHYQCNDAMKLARVLHKSPRAIAESIVAHIPPTP-FSSIEIAGAGFINFTFSKEFLASQL 97

Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +    + +G            KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G     L   +    Q+A+                  H  ++L   Y  
Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+        ++V A+      D +AL +   I  +SE  F       I  I+D
Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  ++     D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   D+A  + + ++   D ++ V  S  S + + LEA   A     ++  +       
Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L  D    K   R+G+ I LR ++D                            +G ++++
Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         F F K+  + + N    + YAY R + I R+     P          
Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRMGLESP---------- 469

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             PQE      + +E  L + L  +P +++       P+ L  YLY L + F        
Sbjct: 470 --PQEGPLAVHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L       +++G++++G+++ N +
Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563


>gi|302870428|ref|YP_003839065.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573287|gb|ADL49489.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 572

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 141/591 (23%), Positives = 229/591 (38%), Gaps = 89/591 (15%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H    ++AA+ L+R LG  P  IA  +  R  +     +V ++G GF+NL ++   
Sbjct: 28  RRSQHADFQSDAALGLARRLGRPPREIAAEVRERAALADVCAAVEVSGPGFLNLTVAGHA 87

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L  ++S++       G  ++ +   V +++   N    MHVGH R  V+GD  A  + + 
Sbjct: 88  LGGLVSALAAD-PRLGVPVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDAAARTLEWL 146

Query: 158 GYEVTREYYINDAGAQINTLALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           G+ V R  ++ D G     L   +         Q L   D D   G+Y     K    E 
Sbjct: 147 GHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLD---GFYKAAREKFDDDEA 203

Query: 214 ADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGD 269
             + S +    L   +   L + +    Q+    +   DL  + +  D F  E  +H   
Sbjct: 204 FRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESSYH--- 260

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL--K 326
              +   ++ L R G +                  D    +F    VG D +  PL+  K
Sbjct: 261 -DQLAPTVEELDRLGLLRRS---------------DGADCVFPPGSVGRDGEPLPLIVRK 304

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           SDG Y Y A DLA  + +    G   ++YV+G     + + + AVAA      A      
Sbjct: 305 SDGGYGYPATDLAALRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQAGWLTAPARAEH 364

Query: 386 CELVR-LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKV- 442
                 L  DG  ++   RAG  + L  ++ E      R   L R +N EL + +  +V 
Sbjct: 365 VGFGSILGPDGRMLR--SRAGGSVKLAGLLTEA---VQRATALARERNPELGESEAAEVG 419

Query: 443 --------------KEQSKE-------------NPVFYVQYAYARCRSIFRQAKDIF-PD 474
                          ++ K+             N   Y+QYAY+R RSIFR+A     PD
Sbjct: 420 RAVGVGAIKYADLSGDRHKDYVLDWERMLSLDGNTAPYLQYAYSRVRSIFRRAGAAARPD 479

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            +  L            + +E  L + L  +  V+E      E ++L  YL+ LA  F  
Sbjct: 480 AEVSL-----------AEPAERALAMELVGFAAVVEEVAGGLEFHRLTAYLHRLAVAFSA 528

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      P LR        +   RL L      ++  GLN++G+ +P  +
Sbjct: 529 FYER---CPVLR----AEGPVRESRLVLCDLTGRVLRQGLNLLGIRTPERL 572


>gi|225445067|ref|XP_002280299.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 649

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 240/576 (41%), Gaps = 118/576 (20%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119
           P TI ++I+  +     ++   +AG GF+N+ LS S++ K +  +++ GIE +   L  K
Sbjct: 129 PPTIGKVIMENLPPTEMIEKCTLAGPGFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK 188

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    MHVGH R  ++GDTLA ++ FS  +V R  ++ D G Q   L  
Sbjct: 189 --RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIE 246

Query: 180 SVF-----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
            +F     W +  A                  + +G +L + Y +    F E+   P  K
Sbjct: 247 FLFDKFPNWEHASA------------------QAIG-DLQEFYKASKKRFDED---PAFK 284

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFH------------RGDP--SP-IRDIID 278
             + QA++++   +         I  IS ++F+            +G+   +P I  +I+
Sbjct: 285 GRAQQAVVRLQGGETSYRRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIE 344

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L+ QG V E       S+  +   ++           G ++   ++KSDG Y Y + D+
Sbjct: 345 QLSNQGLVEE-------SQGARVIHIE-----------GVNIPLIVVKSDGGYNYASTDM 386

Query: 339 A--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----------------------AV 374
           A  +++   E+  + +IYV       + + + + A                        +
Sbjct: 387 AALWYRLNEEKA-EWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVL 445

Query: 375 SEKKAQINVLLCELVRLY--------RDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRF 424
            E   +      E+VRL         R    +    +A ++    L H  + VG  +V++
Sbjct: 446 GEDGKRFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKY 505

Query: 425 MMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
             L  KN+ L ++ F   +    K N   Y+ YA+AR  SI R++     D+D +L    
Sbjct: 506 ADL--KNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGK---DID-ELKKTG 559

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V+  + +    E  L +HL ++  V+E A     P  L  YLY+L+  F   +S+     
Sbjct: 560 VLTLDHD---DERGLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKFYSN----- 611

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                Q         RL L  A A ++    +++G+
Sbjct: 612 ----CQVVGSAEETSRLLLCEATAVVMRKCFHLLGI 643


>gi|291538731|emb|CBL11842.1| arginyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 640

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 124/597 (20%), Positives = 241/597 (40%), Gaps = 81/597 (13%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  IA+ + A++              GF+NL L  
Sbjct: 78  RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVAAKLAETSMFSMAESVKPGFLNLKLDE 134

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L   ++ +      +G         + I++   N   P+HVGH R A++G+++  +  
Sbjct: 135 TFLASYVADMQADEGRFGCEKAENPKTIMIDYGGPNVAKPLHVGHLRSAIIGESIKRIGK 194

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202
           F G++V  + ++ D G Q+  +   +  R  + +Y   N + + P          E  YP
Sbjct: 195 FVGHKVIGDVHLGDWGLQMGLIITELKLRQPELVYFDENFEGEYPKEAPFTISELEEIYP 254

Query: 203 GVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
               K       KE A + + EL N    K    +  + +   +  ++ + + LN+  ++
Sbjct: 255 TASKKSKEDEAYKEAAMQATYELQN--GRKGYQALLSHILNVSVTDLKKNYENLNVSFEL 312

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D     P+ ++ + D+     YV +G L         K D D K++     M+  
Sbjct: 313 WKGESDAQPYIPAMVQKMKDD--GFAYVSDGALV-----VDVKEDTDTKEI--PPCMI-- 361

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
                 LKSDG+  Y   DLA    + E    D +IYV+      +  ++   A      
Sbjct: 362 ------LKSDGASLYNTTDLATIVWREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLV 415

Query: 378 KAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K +  +       +  +DG P K   R G  + L ++V E+ ++ ++ +   +K+ E L 
Sbjct: 416 KPETELKFLGFGTMNGKDGKPFKT--RDGGVMRLEYLVSEIDNEMLKKITENQKSKENLG 473

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQ-------- 487
               + KE +K   +  ++Y     ++    +KD   D+D F  F  N  P         
Sbjct: 474 ISEEEAKETAKTVALAAIKYGDLSNQA----SKDYIFDIDRFTSFEGNTGPYILYTIVRI 529

Query: 488 -------------------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                               S    SE  L++ ++++  VI+ A     P+K+  Y+YDL
Sbjct: 530 KSILHKYHDLGKSAEGAVITSVHSESEKNLMLEISKFNAVIDGAFADTAPHKICSYIYDL 589

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ F+  +         + +   +  +    ++L+    S++ + +N++G  +P  M
Sbjct: 590 ANAFNSFYHE------TKIMSEEDETVQKSYIRLLELTKSVLETSINLLGFSAPERM 640


>gi|268574474|ref|XP_002642214.1| C. briggsae CBR-RRT-1 protein [Caenorhabditis briggsae]
 gi|187025216|emb|CAP35683.1| CBR-RARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 710

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 140/577 (24%), Positives = 248/577 (42%), Gaps = 77/577 (13%)

Query: 49  AAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           AA++ +  +   P  + + I A++  + D V+ + +   GFIN++L+  YLRK +SS+ +
Sbjct: 171 AAILKATGINKKPGDVGKEIHAKLPENIDFVEKIAVMPAGFINVFLNADYLRKQISSLAL 230

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +GI   +  + K  +V ++F S N    MHVGH R  ++GD++  L    GY+V R  +I
Sbjct: 231 NGISLPK--VAK-KRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGYDVLRVNHI 287

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            D G Q   L   ++ R+   L      LP+      + K   K        E   F + 
Sbjct: 288 GDWGTQFGMLIAHLYDRFPDFL----KKLPDISDLQAFYKESKKRF-----DEDEQFKKR 338

Query: 228 KWLPIVKDYS-----VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +  +VK  S     VQA   I     K   I +D               I+D+      
Sbjct: 339 AYECVVKLQSRDGEIVQAWNTICDVSKKYNQIVYDHL----------DIKIKDV-----G 383

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           + +  + ++   K     K DM RK    Q++F +   G DV   ++KSDG +TY  +DL
Sbjct: 384 ESFYQDKMVELVKWIKENKPDMLRKEEGRQIMFPT---GCDVPLTVVKSDGGFTYDTSDL 440

Query: 339 AYFKCKY-ERGFDNMIYVM--------------GSDHSGY---VKRLEAV--AAAVSEKK 378
           A  K +  E   D  IYV+              G D   Y    +R+E V     + + K
Sbjct: 441 AALKYRMLEEKCDWNIYVVDAGQNLHLETVYAAGRDFGWYDENTQRVEHVGFGLVLGDDK 500

Query: 379 AQINVLLCELVR---LYRDGM---PIKMSKRAGDFIT----LRHVVDEVGSDSVRFMMLW 428
            +      E VR   L  +G+     K+ ++  D +     L    D V    V++  L 
Sbjct: 501 KKFKTRSGETVRLLDLLSEGVKRATEKLKEKGRDAVMTEEELAAARDAVAFGCVKYADLS 560

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
              ++   F F ++ +  + N   Y+ YAYAR RSI R +      L   L    ++P  
Sbjct: 561 HTRTQDYIFSFDRMLD-DRGNTAVYLLYAYARIRSIVRTSGVTDSQLADYLAKTPILPLN 619

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              +    + ++ L++   ++ ++ +    +++  Y+Y+LA++FH  ++   E   +   
Sbjct: 620 HPAELKLAKQLLKLSDCVLLVLDSLML---HQMCDYVYNLATLFHDFYN---ECYVIERK 673

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     +   RL L    A++I++   I+G+    +M
Sbjct: 674 EGEPVVVHFHRLALCEVTANVISTCFKILGIREVPKM 710


>gi|209875223|ref|XP_002139054.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209554660|gb|EEA04705.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 603

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 256/606 (42%), Gaps = 112/606 (18%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD----VDSVFIAGKGFINLYL 93
           G    N+ M++   +G       P  I E I   I  DP+     DS+ +A +GFI + +
Sbjct: 37  GDYQCNSGMLIFSTIGKSMGMKSPREIGEKIKQFIMSDPNSNFLFDSIIVAPQGFITVKI 96

Query: 94  SPSYLRKILSSIVVSG-IEYG------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           S  +LRK L +I+  G I+        + +  K  KV ++F S N    MHVGH R  ++
Sbjct: 97  STDFLRKNLQNILQRGEIQVTLSSSPVKIIEDKKLKVLVDFSSPNIAKEMHVGHLRSTII 156

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-DSDLPEGYYPGVY 205
           GDT+  +  + GYEV R  ++ D G Q   L       Y +  Y +  S++PE       
Sbjct: 157 GDTICRIFEYLGYEVFRINHVGDWGTQFGMLI-----EYLKEQYPDYTSNIPE------- 204

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDD 264
                 +L + Y S    F ++   P  K  S + ++K+   D  A      I  IS  +
Sbjct: 205 ----ISDLQEFYRSAKKKFDQD---PEFKLRSQKVVVKLQGGDPTARAAWKKICEISRIE 257

Query: 265 FHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCDM---DRKQLLFRSTMVGD 318
           F +     + D + N+  + Y    Y  ++P    K  +K  +   D  Q +F S    +
Sbjct: 258 FQK-----VYDRL-NIHIEEYGESFYNDLIPEVILKMKEKGIIQLDDGAQCIFTSV---N 308

Query: 319 DVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-- 374
           ++    +KSDG Y Y + DLA  Y++ K  R  D +IY+  S    +  ++  VA  +  
Sbjct: 309 NIPLMAVKSDGGYGYDSTDLAAIYYRLKEIRA-DWVIYITDSGQEEHFLKIFEVAKIMEW 367

Query: 375 -SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
            +  K +++ +   +++   DG   K   R+GD + L  ++DE                 
Sbjct: 368 HNPPKTRLDFVGFGVIQ-GEDGK--KFKTRSGDTVKLVELLDEAVTRAYNELINRRLQNA 424

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              +G  +V++  + +       F F ++ +  K N   Y+ YA
Sbjct: 425 KINGNIEYEDDDLKEMAKKIGYAAVKYFDMKQNRLTNYKFSFDRMLD-PKGNTAVYLLYA 483

Query: 458 YARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           YAR  +IFR++    D   D++  L   ++  Q+SE    E  + + +  +P V +   +
Sbjct: 484 YARLCAIFRRSGLNLDNKSDIEI-LSSYSINIQQSE----ERLIALKIIRFPEVFDGIIV 538

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
                +L  Y Y+L  +    ++        R +  N+ ++   RL L   +  ++   L
Sbjct: 539 DLHINRLTEYCYELCELVAQFYAS------CRILDCNDPEIRQSRLALCFIIKKVLLVAL 592

Query: 575 NIIGVE 580
           N++G+E
Sbjct: 593 NLLGIE 598


>gi|322513913|ref|ZP_08066990.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120248|gb|EFX92201.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 584

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 142/623 (22%), Positives = 252/623 (40%), Gaps = 84/623 (13%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           Y+F +    L + +K+       E  +    ++ +      G    N AM  ++ LG++P
Sbjct: 7   YIFVNIQQILSDKIKQAMIAAGAESNV--EPLVRQSGKPEFGDYQANGAMGAAKKLGMNP 64

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ I+    ++   D + IAG GFIN++L+  +L    +S  +  + +G       T
Sbjct: 65  REFAQKILDNADLNGIADKLEIAGPGFINIFLNQQWLAS-QASEALQAVNFGIKTANPQT 123

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALS 180
            V I++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L A  
Sbjct: 124 IV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYL 182

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                + A     SDL E +Y         KE  D  S E+  F E+    +VK  S   
Sbjct: 183 EKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV--FAEKARNYVVKLQSGDE 231

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPKSKTT 299
             + +   L  + + H+    ++++ R + +   +D++        +Y  +LP   +   
Sbjct: 232 YCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE-----SLYNPMLPEIVADLK 282

Query: 300 QK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
            K    + D   ++F        GD +   + K DG + Y   D+A  K +YE    D +
Sbjct: 283 AKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRV 342

Query: 353 IYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +    S  + ++++   +   A  V E  +  +     +  L +DG P K   R+G  + 
Sbjct: 343 LVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM--LGKDGKPFKT--RSGGTVK 398

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L+ ++DE                           V   SV++  L +  +    FD+  +
Sbjct: 399 LKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNM 458

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+QYAY R RSIF +A      L+ ++            +  E  L V L
Sbjct: 459 L-TFEGNTAPYMQYAYTRIRSIFNRAGINANGLNGEI---------GLIEDKERALAVKL 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++  V+        P+ L  YLY+LA  F   +      P L         +   RL+L
Sbjct: 509 LQFEEVLNGVAKDGMPHILCQYLYELAGAFSSFY---EACPMLN----AEENVKNSRLRL 561

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL+++G+++  +M
Sbjct: 562 ATLTAKTLKQGLDLLGIKTIEKM 584


>gi|73953490|ref|XP_866915.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 2 [Canis
           familiaris]
          Length = 692

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 165/344 (47%), Gaps = 38/344 (11%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  V+ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++++V+G++     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+
Sbjct: 171 VSQQLTNLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I+K + +  +  + R +   +    DI + E    RG+      
Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDR 341

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + D++     +G+V              + D D ++++F   + G  V   ++KSDG YT
Sbjct: 342 MNDVVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           Y  +DLA  K + +E   D +IYV+ +  S + + +   A  + 
Sbjct: 384 YDTSDLAALKQRLFEEKADMIIYVVDNGQSVHFQTIFGAAQMIG 427


>gi|312873557|ref|ZP_07733604.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090810|gb|EFQ49207.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 558

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 141/601 (23%), Positives = 253/601 (42%), Gaps = 115/601 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++ ++ +   +   G  +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKL-VNDNFAEIEAVGP-YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
            DD +  L LKSDG+  Y   DLA   Y K +Y+  F   +YV G++ SG+ K+L+ V  
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410
            +     Q ++       + ++G   K+S R G+ + L                      
Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400

Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI
Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     D    L            D     +   +A++P +I+ A    EP  +A Y
Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P E
Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557

Query: 585 M 585
           M
Sbjct: 558 M 558


>gi|241668933|ref|ZP_04756511.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877465|ref|ZP_05250175.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843486|gb|EET21900.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 581

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 130/598 (21%), Positives = 247/598 (41%), Gaps = 107/598 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L++     PL IA+ I+ +I+ +     + +A  GFIN+ LS  +L    
Sbjct: 36  GHFQCNGAMPLAKFAKKAPLVIAQEIIEQIENEDIFYKLEVAKPGFINISLSNKFLAATT 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S  ++G     K  KV ++F   N   PMHVGH R A++GD L  L  F    V 
Sbjct: 96  DKFLNSS-KFGVQDNTKPKKVVLDFGGPNVAKPMHVGHIRSALLGDALQRLHRFYNDNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKY-- 217
            + ++ D G Q+  L   +       +Y +++      Y G Y K      +ELA+ Y  
Sbjct: 155 SDVHLGDWGTQMGMLIEEIKLESPDLVYFDEN------YNGEYPKESPVTVQELAEIYPR 208

Query: 218 -----SSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                 S+++   +            K    +  + V+  ++ I+ D  +L++  D+++ 
Sbjct: 209 ASKRCKSDIIEMDKARQATFELQQGRKGYVALWQHFVRISIEAIKKDFDSLDVHFDLWLG 268

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E D ++     + ++I       ++YE        +     D +++ +            
Sbjct: 269 ESDANKF----VDEMIAYFKTNKFIYE-------DEGAWVIDTNKEGV------------ 305

Query: 322 RPL--LKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
            PL  +K DG   Y   DLA  ++   +   D +IYV+    S + K++ +VA     K+
Sbjct: 306 PPLIVIKKDGGVMYGTTDLATLWQRAKDLNPDEIIYVVDKRQSLHFKQVFSVA-----KR 360

Query: 379 AQINVLLCELVRLY------RDGMPIKMSKRAGDFITL--------------------RH 412
            ++    C+L  +       +DG P K   R G  + L                     +
Sbjct: 361 TKVVSEECKLKHVAFGTVNGKDGRPFKT--REGGVMHLSDLISQAKNYAHKRMPDENDEN 418

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471
           + +++   +++F  L    +    FD  K  + + K  P  Y+ Y   R ++I R+   +
Sbjct: 419 ITNQIAMATIKFGDLVNNYANDYIFDLEKFAQYEGKTGP--YLLYTTVRAKAILRK---V 473

Query: 472 FPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           F D ++D+   N + +E       +  E +L + L ++P  +  A    +P+ +  Y Y 
Sbjct: 474 FGD-NYDI---NSLAKEYRITKADNEHEEKLQLQLIQFPIAVSRAYENSQPHHICEYAYS 529

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F+  + +         +  N+ +L   R+ L  A    +    +++G+  P  M
Sbjct: 530 LANSFNRFYVN------CPIMNLNDEQLKKSRIALCMATVKAMTIATDLLGISIPERM 581


>gi|326574023|gb|EGE23972.1| arginyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 575

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|312872199|ref|ZP_07732272.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092283|gb|EFQ50654.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 558

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 250/601 (41%), Gaps = 115/601 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++  D   + V +    +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I     K L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRI----YKELGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
            DD +  L LKSDG+  Y   DLA   Y K +Y+  F   +YV G++ SG+ K+L+ V  
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410
            +     Q ++       + ++G   K+S R G+ + L                      
Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400

Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464
                V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI
Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+      D    L            D     +   +A++P +I+ A    EP  +A Y
Sbjct: 457 LRKVNVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P E
Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557

Query: 585 M 585
           M
Sbjct: 558 M 558


>gi|326561584|gb|EGE11925.1| arginyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 567

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 19  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 78

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 79  LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 133

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 134 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 188

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 189 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 233

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 234 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 289

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 290 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 345

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 346 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 403

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 404 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 462

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 463 FARA-----GLDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 513

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 514 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 566

Query: 585 M 585
           M
Sbjct: 567 M 567


>gi|326569480|gb|EGE19540.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 575

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKNLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|253682317|ref|ZP_04863114.1| arginine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562029|gb|EES91481.1| arginine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 563

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 251/584 (42%), Gaps = 115/584 (19%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111
           L++     P  IAE + ++I  +   + V   G  ++N ++   S+++  L+ ++  G  
Sbjct: 44  LAKAFRKAPNMIAEELSSKIN-NEGFEKVVALGP-YLNFFMDKGSFVKDTLNKVIEEGER 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG +  GKG  V I++ S N   P HVGH     +G++L  ++ F GY      ++ D G
Sbjct: 102 YGSSEEGKGKNVTIDYSSPNIAKPFHVGHLFSTAIGNSLYRMLNFEGYNSIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADK---YSSEL 221
            Q   L +S +  W  + AL  +    P      +Y+K H   E    L D+   Y  +L
Sbjct: 162 TQFGKL-ISAYKRWVDEDALEKD----PIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKL 216

Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  +E+   W    K+ S++   K+     + L ++ D +  E  ++    S I++I  
Sbjct: 217 EDGEKEEVELW-ERFKNLSLKEFKKV----YELLGVKFDSYAGESFYNDKMDSVIKEI-- 269

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSY 331
                                     D K +L  S     ++ DD + P   ++K DG+ 
Sbjct: 270 --------------------------DEKGILVESNGAKVVMMDDENIPPCIIVKGDGAT 303

Query: 332 TYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCE 387
            Y   DLA   Y K  Y+  F   IYV+GSD S + K++      +    A     +   
Sbjct: 304 IYATRDLAAAFYRKKNYD--FHKSIYVVGSDQSLHFKQVFKTIEKMGYNWADDCKHVAFG 361

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------- 438
           LVR        K+S R G  I L  +++E  S ++   ++  KN EL + +         
Sbjct: 362 LVRF----ADKKLSTRKGQVIFLEDLLNESVSKTLE--VINEKNPELKNKEEVAKKVGIG 415

Query: 439 ---FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
              F  +K + +++ VF              YVQY YAR +SI R+A ++  +++F    
Sbjct: 416 AIIFTYLKNKREKDIVFNWNEMLNFEGETGPYVQYTYARGKSILRRAGEVQGEVNF---- 471

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +  + EF+   ++++ +L E   V   A    EP  +  Y+ D+A  F+  ++    
Sbjct: 472 -AALNSQEEFNL--VKVLGNLKEEVLV---AIDKLEPSIVTRYIIDVAKAFNKFYNAHN- 524

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   +  +   RL+LV A   +I +GL+++G+E   EM
Sbjct: 525 -----IMATEDMAVKNARLKLVEATCQVIKNGLDLLGIEVVEEM 563


>gi|126273989|ref|XP_001387368.1| arginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126213238|gb|EAZ63345.1| arginyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 603

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 125/541 (23%), Positives = 219/541 (40%), Gaps = 90/541 (16%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+  + + + L   ++   +    EYG   +G   KV +EF S N   P H GH R  ++
Sbjct: 110 FLQFFFNKTLLYNLVIGDALARKTEYGALPLGLNKKVIVEFSSPNIAKPFHAGHLRSTII 169

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  L++L   +G+ VTR  Y+ D G Q   LA+  F RY  ++ L ++    P  +   V
Sbjct: 170 GGFLSNLYEKAGWNVTRINYLGDWGKQFGLLAVG-FERYGSEEKLASD----PINHLFEV 224

Query: 205 YLK-----------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
           Y+K               E A  Y  ++ +  EE  L I K +   ++ K I D    LN
Sbjct: 225 YVKINQDITAEGETSPTNEAARLYFKKMEDGDEEA-LKIWKRFRELSIEKYI-DTYARLN 282

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNL-ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           I +D++  E       P  +  +   +   +G ++E                DR   L  
Sbjct: 283 IHYDVYSGESQV----PKELMKMATKIFEEKGLIHE----------------DRGAKLID 322

Query: 313 STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS--------- 361
            T     + + L+ KSDG+  Y   D+     +Y    FD MIYV+ S            
Sbjct: 323 LTKFNKKLGKTLVEKSDGTSLYLTRDVGEAMKRYNTYKFDKMIYVIASQQDLHCAQFFEV 382

Query: 362 ------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                  +VK +E V       +S +K  + V L  ++   ++ M   M      +  + 
Sbjct: 383 LKQMGFEWVKNMEHVNFGMVLGMSTRKGTV-VFLDNILEETKEKMHEVMKANEAKYAQIE 441

Query: 412 ---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ 467
               + D VG  +V    +  K     +F + ++   +    P  Y+QYA++R  S+ R+
Sbjct: 442 DPDKIADLVGISAVMIQDMQAKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLSSVQRK 499

Query: 468 AKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           +     DL   ++DL            +     LI  LA+YP  I+ A    EP  +  Y
Sbjct: 500 SGYTEEDLATANYDLL----------VEPCAANLIRTLAQYPDTIKKALKTHEPSTIVTY 549

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++L  +    +        + +V    ++L + RL L  +   ++ +G+ ++G+   + 
Sbjct: 550 LFNLTHIVSQCYD-------ILWVAGQEKELAVARLALYASAKQVLYNGMTLLGLTPVDR 602

Query: 585 M 585
           M
Sbjct: 603 M 603


>gi|284034982|ref|YP_003384912.1| arginyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283814275|gb|ADB36113.1| arginyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 599

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 236/607 (38%), Gaps = 143/607 (23%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I + I   +  +  V S F   +GF+N+ L+ +   ++L+ +      +G  L  KG
Sbjct: 54  PAQIGQAIGNWLVENSPVVSKFNVVQGFLNISLADAAWVEVLNDMATDA-SFG-TLPSKG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLA 178
             V +EF S N   P+H+GH R   +GD+++ ++  +GY+V +   +ND G  I  + LA
Sbjct: 112 QSVMVEFSSPNTNKPLHLGHLRNNFLGDSVSRILVANGYDVVKTCIVNDRGVHICKSMLA 171

Query: 179 LSVF-------WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEK 228
             +F       W   +        L   YY      Y   V + +A   + E+     EK
Sbjct: 172 YRMFGSDASGQWETPETSGLKGDHLIGKYYVLFDKAYKAQVEEMVAQGTTKEV----AEK 227

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
             P++++  VQ M+++                    + +GDP  +  +   L    +VY 
Sbjct: 228 TAPLMQE--VQQMLRL--------------------WEQGDPETVA-LWKKL--NNWVYA 262

Query: 289 GILPPPKS------KTTQKCDM-----------DRKQLLFRST-------MVGDDVDRPL 324
           G     KS      KT  + +             +K + +R         +  + +D+ L
Sbjct: 263 GFDVTYKSIGVSFDKTYYESNTYLLGKEIVEEGIQKGVFYRKDDGSVWIDLTEEGLDQKL 322

Query: 325 -LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+ DG+  Y   DL     K++  G D  I+V+G+                 E+    N
Sbjct: 323 VLRGDGTSVYITQDLGTTDLKFQDFGSDRQIWVVGN-----------------EQDYHFN 365

Query: 383 VLLCELVRL---YRDGM----------PI-KMSKRAGDFITLRHVVDEVG---------- 418
           VL   L RL   Y +G+          P  KM  R G  +    ++ E            
Sbjct: 366 VLFAILRRLGRPYANGLYHLSYGMVDLPTGKMKSREGTVVDADDLIQETTDAASNAADEA 425

Query: 419 --------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE--NPVF----------YVQYAY 458
                   SD  +  +        L +   KV  Q +   NP            Y+QY +
Sbjct: 426 AKGKLDEFSDEEKKALFQMLGLGALKYYLLKVDPQKRMQFNPAESVDLHGNTGPYIQYVH 485

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +SI R+A +    LD  +    +       D  E QLI+ L++YP+ I  A     P
Sbjct: 486 ARIQSILRKAAETGVTLDGTVMATGL-------DDVEQQLILLLSQYPQRIAEAGATYAP 538

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y YDLA +F+  +       +L  ++  +      RL L   V   I   + ++G
Sbjct: 539 SYIAQYAYDLAKIFNQFYD------KLSILKETDSVKLHSRLVLSKLVGETIRKAMGLLG 592

Query: 579 VESPNEM 585
           +E P++M
Sbjct: 593 IEVPSKM 599


>gi|88809846|ref|ZP_01125352.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786230|gb|EAR17391.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 590

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 143/600 (23%), Positives = 236/600 (39%), Gaps = 106/600 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ DP    +     IAG GFINL + P  L
Sbjct: 40  GDFQANGALPLAKPLKQAPRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERL 99

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN-----IEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              +S+        G   +G    VN     ++F S N    MHVGH R  ++GD+LA +
Sbjct: 100 AAEVSA------RLGDERLGVPAVVNEAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARV 153

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212
           + F G+ V R  ++ D G Q   L   +     +AL   D+ DL               +
Sbjct: 154 LEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDL--------------GD 199

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L   Y      F E++         V  +       LKA  +  D   S  +F +     
Sbjct: 200 LVAFYREAKKRFDEDEAFQFTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK----- 252

Query: 273 IRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDR-PLL- 325
           I D +D  L+ +G  +     P      +  ++    D  + +F   + G D +  P++ 
Sbjct: 253 IYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAECVFLEGVQGKDGNPLPVIV 312

Query: 326 -KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
            KSDG + Y   DLA  + ++       G   +IYV  +  + +   +  VA  A     
Sbjct: 313 RKSDGGFNYATTDLAAIRYRFGAVPDGDGARRVIYVTDAGQANHFAGVFQVATRAGWIPD 372

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            A++  +   LV+   DG   K+  R+GD + LR ++DE                     
Sbjct: 373 GARLEHVPFGLVQ-GEDGK--KLKTRSGDTVRLRDLLDEAVERAEADLRSRLKAEERSES 429

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  +V++  L +       F F ++    + N   Y+ YA  R   I R
Sbjct: 430 EEFIHHVAATVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIAR 488

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           +  D+            V   + +F +  E  L+  L ++  VI        P +L  YL
Sbjct: 489 KGGDL-----------EVSTAQLQFSEPQEWALVRELLKFDVVIAEVEEELLPNRLCSYL 537

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++L+ VF+  +        +  ++A +  L   RL L    A  + +GL ++G+ S   M
Sbjct: 538 FELSQVFNRFYDQ------VPVLKAESEALP-SRLALCRLTADTLKAGLGLLGIPSLERM 590


>gi|315506779|ref|YP_004085666.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315413398|gb|ADU11515.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 572

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 228/602 (37%), Gaps = 111/602 (18%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H    ++AA+ L+R LG  P  IA  +  R  +     +V ++G GF+NL ++   
Sbjct: 28  RRSQHADFQSDAALGLARRLGQPPREIAAEVRERAALADVCAAVEVSGPGFLNLTVAGHA 87

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L  ++S++       G  ++ +   V +++   N    MHVGH R  V+GD  A  + + 
Sbjct: 88  LGGLVSALAAD-PRLGVPVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDAAARTLEWL 146

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G+ V R  ++ D G     L                    L  F++  +A +++D    E
Sbjct: 147 GHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAARAKFDDDEAFRE 206

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
                V     G     +    L+   E  +L +               DL  + +  D 
Sbjct: 207 RSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVY--------------DLLDVTLTGDD 252

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           F  E  +H      +   ++ L R G +                  D    +F    VG 
Sbjct: 253 FRGESSYH----DQLAPTVEELDRLGLLRRS---------------DGADCVFPPGSVGR 293

Query: 319 DVDR-PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           D +  PL+  KSDG Y Y A DLA  + +    G   ++YV+G     + + + AVAA  
Sbjct: 294 DGEPLPLIVRKSDGGYGYPATDLAALRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQA 353

Query: 375 SEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNS 432
               A            L  DG  ++   RAG  + L  ++ E      R   L R +N 
Sbjct: 354 GWLTAPARAEHVGFGSILGPDGRMLR--SRAGGSVKLAGLLTEA---VQRATALARERNP 408

Query: 433 ELLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCRSI 464
           EL + +  +V                ++ K+             N   Y+QYAY+R RSI
Sbjct: 409 ELGESEAAEVGRAVGVGAIKYADLSGDRHKDYVLDWERMLSLDGNTAPYLQYAYSRVRSI 468

Query: 465 FRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           FR+A     PD +  L            + +E  L + L  +  V+E      E ++L  
Sbjct: 469 FRRAGAAARPDAEVSL-----------AEPAERALAMELVGFAAVVEEVAGGLEFHRLTA 517

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL+ LA  F   +      P LR        +   RL L      ++  GL+++G+ +P 
Sbjct: 518 YLHRLAVAFSAFYER---CPVLR----AEGPVRESRLVLCDLTGRVLRQGLDLLGIRTPE 570

Query: 584 EM 585
            +
Sbjct: 571 RL 572


>gi|296112948|ref|YP_003626886.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920642|gb|ADG60993.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 575

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDNIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|291519091|emb|CBK74312.1| arginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 586

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 128/597 (21%), Positives = 234/597 (39%), Gaps = 90/597 (15%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C       N A+  ++     P+ IA  +  ++  +           GFIN+ LS 
Sbjct: 33  RPDLC---QFQCNGALAAAKEYKKAPIAIAGEVAEKLASNSMFSKCEACPPGFINMNLSD 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            ++   +S++      +G + +    KV I++   N   P+HVGH R A++G+++     
Sbjct: 90  QFIVDFVSTMADDKERFGVDKVSSPKKVMIDYGGPNVAKPLHVGHLRSAIIGESIKRTAR 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG-----------V 204
           F G EV  + ++ D G Q+  +   +  R    +Y ++S   +G YP            +
Sbjct: 150 FMGDEVIGDVHLGDWGLQMGLIITELKLRQPDLVYFDES--YDGEYPTEPPFTITELEEI 207

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258
           Y    GK   D    E       +     K Y   +  ++ +  +DLK     L++  D+
Sbjct: 208 YPCASGKSKEDAAYKEAAMTATYELQHGRKGYQALLSHILNVSVNDLKRNYEKLDVDFDL 267

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +  E D     P    D++  +   G+ Y  EG L         K + D K++     M+
Sbjct: 268 WKGESDAQPYIP----DMVQKMKDDGFAYISEGALV-----VDVKEETDTKEV--PPCMI 316

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                   LKSDG+  Y   DLA    +  +   D++IYV+      Y  ++   A    
Sbjct: 317 --------LKSDGASLYNTTDLATMVWRMKDYNPDSIIYVVDKRQELYFTQVFRCAKKTG 368

Query: 376 EKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------------ 416
              A  N+       +  +DG P K   R G  + L +++ E                  
Sbjct: 369 IVPADKNLYFVGFGTMNGKDGKPFKT--RQGGVMRLEYLLQEVEEKMLEKIRENGTMDEE 426

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L  + S+   FD  +    ++ N   Y+ Y   RC+SI  +A
Sbjct: 427 EAEKTAQIVGLSAVKYGDLSNQASKDYIFDIDRFT-SAEGNTGPYILYTIVRCKSILTKA 485

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F   ++P  SE   SE  L + L ++   + +A     P+K+  Y+YDL
Sbjct: 486 -------GVSSFNGAILPAHSE---SERGLQLELTKFMAALTSAYEEMAPHKICAYIYDL 535

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ F+  +         + +   +  +    L+L+     ++   ++++G  +P  M
Sbjct: 536 ANAFNRFYHD------TKILAEEDEAVKASYLKLLWLTRGVLEKAIDLLGFNAPERM 586


>gi|167626497|ref|YP_001676997.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596498|gb|ABZ86496.1| Arginine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 642

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 129/598 (21%), Positives = 247/598 (41%), Gaps = 107/598 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L++     PL IA+ I+ +I  +     + +A  GFIN+ LS  +L    
Sbjct: 97  GHFQCNGAMPLAKFAKKAPLMIAQEIIEQIDDEDIFSKLEVAKPGFINISLSNKFLAATT 156

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S  ++G     K  KV ++F   N   PMHVGH R A++GD L  L  F    V 
Sbjct: 157 DKFLNSS-KFGVQGNTKPKKVVLDFGGPNVAKPMHVGHIRSALLGDALQRLHRFYNDNVI 215

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKY-- 217
            + ++ D G Q+  L   +       +Y +++      Y G Y K      +ELA+ Y  
Sbjct: 216 SDVHLGDWGTQMGMLIEEIKLESPDLVYFDEN------YNGEYPKESPVTVQELAEIYPR 269

Query: 218 -----SSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                 S+++   +            K    +  + V+  ++ I+ D  +L++  D+++ 
Sbjct: 270 ASKRCKSDIIEMDKARQATFELQQGRKGYVALWQHFVRISIEAIKKDFDSLDVHFDLWLG 329

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E D ++     + ++I       ++YE        +     D +++ +            
Sbjct: 330 ESDANKF----VDEMIAYFKTNNFIYE-------DEGAWVIDTNKEGI------------ 366

Query: 322 RPL--LKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
            PL  +K DG   Y   DLA  ++   +   D +IYV+    S + K++ +VA     K+
Sbjct: 367 PPLIVIKKDGGVMYGTTDLATLWQRAKDLNPDEIIYVVDKRQSLHFKQVFSVA-----KR 421

Query: 379 AQINVLLCELVRLY------RDGMPIKMSKRAGDFITL--------------------RH 412
            ++    C+L  +       +DG P K   R G  + L                     +
Sbjct: 422 TKVVSEECKLKHVAFGTVNGKDGRPFKT--REGGVMHLSDLISQAKNYAHKRMPDENDEN 479

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471
           +++++   +++F  L    +    FD  K  + + K  P  Y+ Y   R ++I R+   +
Sbjct: 480 IINQIAMATIKFGDLVNNYANDYIFDLEKFAQYEGKTGP--YLLYTTVRAKAILRK---V 534

Query: 472 FPDLDFDLFPRNVIPQESEFDTS----ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           F D ++D+   N + +E     +    E +L + L ++P  +  A    +P+ +  Y Y 
Sbjct: 535 FGD-NYDI---NSLAKEYRITKADNEHEEKLQLQLIQFPIAVSRAYENSQPHHICEYAYS 590

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+ F+  + +         +  ++ +L   R+ L  A    +    +++G+  P  M
Sbjct: 591 LANSFNRFYVN------CPIMNLDDEQLKKSRIALCMATVKAMTIATDLLGISIPERM 642


>gi|291536403|emb|CBL09515.1| arginyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 595

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 124/600 (20%), Positives = 240/600 (40%), Gaps = 87/600 (14%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  IA+ + A++              GF+NL L  
Sbjct: 33  RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVAAKLAEASMFSMTESVKPGFLNLKLDE 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L   ++ +      +G         + I++   N   P+HVGH R A++G+++  +  
Sbjct: 90  TFLASYVADMQADEGRFGCEKAENPKTIMIDYGGPNVAKPLHVGHLRSAIIGESIKRIGK 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202
           F G++V  + ++ D G Q+  +   +  R  + +Y   N + + P          E  YP
Sbjct: 150 FVGHKVIGDVHLGDWGLQMGLIITELKLRQPELVYFDENYEGEYPKEAPFTISELEEIYP 209

Query: 203 GVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
               K       KE A + + EL +    K    +  + +   +  ++ + + LN+  ++
Sbjct: 210 TASKKSKEDEAYKEAAMQATYELQH--GRKGYQALLSHILNVSVTDLKKNYENLNVSFEL 267

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D     P+ ++ + D+     YV +G L         K D D K++     M+  
Sbjct: 268 WKGESDAQPYIPAMVQKMKDD--GFAYVSDGALV-----VDVKEDTDTKEI--PPCMI-- 316

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
                 LKSDG+  Y   DLA    + E    D +IYV+      +  ++   A      
Sbjct: 317 ------LKSDGASLYNTTDLATIVWREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLV 370

Query: 378 KAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K +  +       +  +DG P K   R G  + L ++V E+ ++ ++ +   +K  E L 
Sbjct: 371 KPETELKFLGFGTMNGKDGKPFKT--RDGGVMRLEYLVSEIDNEMLKKITENQKAKENLG 428

Query: 437 FDFCKVKEQSKE-------------------------------NPVFYVQYAYARCRSIF 465
               + KE +K                                N   Y+ Y   R +SI 
Sbjct: 429 ISEEEAKETAKTVALAAIKYGDLSNQASKDYIFDIDRFTSFEGNTGPYILYTIVRIKSIL 488

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +  D+  + D  +    +    SE   SE  L++ L+++  VIE A     P+K+  Y+
Sbjct: 489 HKYHDLGKNADNSV----ITAAHSE---SEKNLMLELSKFNAVIEGAFTDTAPHKICSYI 541

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDLA+ F+  +         + +   +  +    ++L+    S++ + ++++G  +P  M
Sbjct: 542 YDLANAFNSFYH------ETKIMSEEDETVQKSYIRLLELTKSVLETSIDLLGFSAPERM 595


>gi|49477538|ref|YP_036321.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81396232|sp|Q6HJF5|SYR1_BACHK RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|49329094|gb|AAT59740.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 562

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 139/621 (22%), Positives = 252/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKLS-DPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 181 ----------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVTDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K +I +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRI-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    +     + ++  +      V  +VG+ +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKDEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDHSWNIVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPKVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|331268963|ref|YP_004395455.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125513|gb|AEB75458.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 563

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 248/590 (42%), Gaps = 127/590 (21%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111
           L++     P  IAE + ++I  +   + V   G  ++N ++   S++   L+ ++  G  
Sbjct: 44  LAKTFRKAPNMIAEELSSKIN-NEGFEKVVALGP-YLNFFMDKGSFVADTLNKVLSEGER 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG +  GKG  V I++ S N   P HVGH     +G++L  ++ F GY      ++ D G
Sbjct: 102 YGSSEEGKGKNVTIDYSSPNIAKPFHVGHLFSTSIGNSLYRMLNFEGYNSIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADK---YSSEL 221
            Q   L +S +  W  Q AL  +    P      +Y+K H   E    L D+   Y  +L
Sbjct: 162 TQFGKL-ISAYKRWVDQDALEKD----PIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKL 216

Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  +E+   W    K+ S++   K+     + L ++ D +  E  ++    S I++I  
Sbjct: 217 EDGEKEEVELW-ERFKNLSLKEFKKV----YELLGVKFDSYAGESFYNDKMDSVIKEI-- 269

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSY 331
                                     D+K +L  S     ++ DD + P   ++K DG+ 
Sbjct: 270 --------------------------DKKGILVESNGAKVVMMDDENMPPCIIVKGDGAT 303

Query: 332 TYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCE 387
            Y   DLA   Y K  Y+  F   IYV+GSD S + K++      +    A     +   
Sbjct: 304 IYATRDLAAAFYRKKNYD--FYKSIYVVGSDQSLHFKQVFNTIEKMGYDWANDCKHVAFG 361

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------- 438
           LVR        K+S R G  I L  +++E  S ++   ++  KN +L + +         
Sbjct: 362 LVRF----ADKKLSTRKGQVIFLEDLLNESVSKTLE--VINEKNPQLKNKEEVAKKVGIG 415

Query: 439 ---FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
              F  +K + +++ VF              YVQY YAR +SI R+A ++  +++F    
Sbjct: 416 AVIFTYLKNKREKDIVFNWNEMLNFEGETGPYVQYTYARGKSILRRAGEVQGEVNF---- 471

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +  + EF+     L+  L      +  A    EP  L  Y+ D+A  F+        
Sbjct: 472 -AALNSQEEFN-----LVKVLGNLKEEVLGAIDKLEPSILTRYIIDVAKAFN-------- 517

Query: 542 NPRLRFVQANNRKLTM------MRLQLVHAVASIINSGLNIIGVESPNEM 585
               +F  A+N   T        RL+LV A   +I +GL+++G+E   EM
Sbjct: 518 ----KFYNAHNIMATEDIAVKNARLKLVEATCQVIKNGLDLLGIEVVEEM 563


>gi|326577009|gb|EGE26904.1| arginyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326577465|gb|EGE27349.1| arginyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 575

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FVRAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|293392120|ref|ZP_06636454.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952654|gb|EFE02773.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 577

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 130/580 (22%), Positives = 229/580 (39%), Gaps = 76/580 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG++P   A+L++++ ++    +   IAG GFIN++L   +L + +
Sbjct: 37  GDYQANGIMPAAKKLGINPREFAQLVLSKAELQDIAEKTEIAGPGFINIFLKDGWLAENI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +  V   + G +   K T V +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 97  GN-AVKDSKLGIHHQDKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154

Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204
           R  ++ D G Q   L                   L  F+R  +  Y+ D    E     V
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKKHYDEDPVFAEKARNYV 214

Query: 205 YLKHVGKELADKYSSELL---------NFPEEKWLPIVKDYSVQA----MMKIIRDDLK- 250
                G E       +L+         N+         KD   ++    M+  I +DLK 
Sbjct: 215 VKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESLYNPMLPGIVEDLKK 274

Query: 251 -ALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             L ++ D    +  D+F   D  P+  I+      G++Y        +K   +     +
Sbjct: 275 QGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQK-KDGGFLYT-TTDIAAAKYRYETLKASR 332

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L+F  T     + +  L              Y    ++  + N   ++G D   +  R 
Sbjct: 333 ALVFSDTRQSQHMQQAWL--------ITRKAGYVPDSFQLEYKNFGMMLGKDGKPFKTR- 383

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                  S    ++  LL E +   R G+ I     A        V++ VG  SV++  L
Sbjct: 384 -------SGDTVKLADLLDEAIE--RAGVLISQKSTALSEQEKADVIEAVGIGSVKYADL 434

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +       FD+  +    + N   Y+QYAY R RSIF +++         + P  V  Q
Sbjct: 435 SKNRITDYVFDWDNMLS-FEGNTAPYMQYAYTRIRSIFNRSQ---------INPAEV-EQ 483

Query: 488 ESEFDTSELQ--LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            S   T+E +  L + L ++   I+       P+ L  YLY+LA VF   + H       
Sbjct: 484 ASLTLTNEKERALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEH------C 537

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   ++++ + RL+L       +  GL+++G+++   M
Sbjct: 538 PILNNEDQQVKLSRLKLALLTERTLKQGLDLLGIKTVERM 577


>gi|255654755|ref|ZP_05400164.1| arginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449501|ref|ZP_06891278.1| arginine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878176|ref|ZP_06902191.1| arginine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261565|gb|EFH08383.1| arginine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430929|gb|EFH16761.1| arginine--tRNA ligase [Clostridium difficile NAP07]
          Length = 566

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 147/622 (23%), Positives = 260/622 (41%), Gaps = 100/622 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   + N LKE   KI+   K     +IE P +   G  +      L++     P  IA
Sbjct: 3   DFKVAISNCLKE---KIEDLSKEEIEALIEVPPNKDMGDYAF-PCFKLAKVFRKAPNMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124
             +   I+   ++  V   G G++N +++ S L + +   V+   E YG +  GK   V 
Sbjct: 59  SELAESIEPSGEITKVIQLG-GYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKTVI 117

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH R  V+G+ L  +    GY+  R  ++ D G Q   L ++ F +
Sbjct: 118 VEYSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYKTIRINHLGDYGTQFGKLIVA-FKK 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVK--DYS 237
           + +      + +PE       LK     L  ++  E    PE       W   ++  D  
Sbjct: 177 WGEKEVVESNPIPE------LLK-----LYVRFHDEAEQHPEMEDEARAWFAKLENGDEE 225

Query: 238 VQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPP 293
            + + +  RD+ LK  N  + +   E D   G+      +  +I+ L  +  + E     
Sbjct: 226 AKELWQWFRDESLKEFNRVYKLLDIEFDSLAGESFYSDKMNRVIELLEEKHLLKE----- 280

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERG 348
             SK  +  D++  ++             P L  K+DGS  Y   DLA   Y K  Y+  
Sbjct: 281 --SKGARIVDLEEYKM------------PPALITKNDGSTLYMTRDLAAAIYRKETYD-- 324

Query: 349 FDNMIYVMGSDHS----GYVKRLEAVA-------------------AAVSEKKAQINVLL 385
           FD  IYV+GS  +     + K +E +                      +S +K ++  L 
Sbjct: 325 FDKCIYVVGSQQNLHFQQWFKVIELMGYDWAKDLIHVGFGMVALEEGTMSTRKGRVVFLE 384

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
             L +       I ++K   +   +  +  +VG  +V F  L   NS + D+ F   +  
Sbjct: 385 DALNQAIDKTKEIILAKNP-NAKNVDEISKQVGVGAVVFQEL--SNSRIKDYTFSWERTL 441

Query: 446 SKENPVF-YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           S +     YVQY +ARC ++ R+A+ ++  D+D+ L         ++ D++E+  ++   
Sbjct: 442 SFDGETGPYVQYTHARCCAVLRKAEVEVTSDIDYSLL--------ADEDSAEVLRVIE-- 491

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            + + I  A    EP+ +  ++ DLA  F+  +    +NP L      N ++   RL LV
Sbjct: 492 SFNKNILLALKKNEPHIVTRFMLDLAQAFNKFY---HDNPIL----VENLEIRKARLALV 544

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A    + + L ++G+ +P  M
Sbjct: 545 LATKQTLENSLRLLGMHAPERM 566


>gi|126698290|ref|YP_001087187.1| arginyl-tRNA synthetase [Clostridium difficile 630]
 gi|254974326|ref|ZP_05270798.1| arginyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091722|ref|ZP_05321200.1| arginyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255099825|ref|ZP_05328802.1| arginyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255305710|ref|ZP_05349882.1| arginyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255313450|ref|ZP_05355033.1| arginyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255516138|ref|ZP_05383814.1| arginyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649234|ref|ZP_05396136.1| arginyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260682408|ref|YP_003213693.1| arginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260686007|ref|YP_003217140.1| arginyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306519336|ref|ZP_07405683.1| arginyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123174390|sp|Q189Q7|SYR_CLOD6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115249727|emb|CAJ67544.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Clostridium difficile]
 gi|260208571|emb|CBA61255.1| arginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260212023|emb|CBE02575.1| arginyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 566

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 147/622 (23%), Positives = 260/622 (41%), Gaps = 100/622 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   + N LKE   KI+   K     +IE P +   G  +      L++     P  IA
Sbjct: 3   DFKVAISNCLKE---KIEDLSKEEIEALIEVPPNKDMGDYAF-PCFKLAKVFRKAPNMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124
             +   I+   ++  V   G G++N +++ S L + +   V+   E YG +  GK   V 
Sbjct: 59  SELAESIEPSGEITKVIQLG-GYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKTVI 117

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH R  V+G+ L  +    GY+  R  ++ D G Q   L ++ F +
Sbjct: 118 VEYSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYKTIRINHLGDYGTQFGKLIVA-FKK 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVK--DYS 237
           + +      + +PE       LK     L  ++  E    PE       W   ++  D  
Sbjct: 177 WGEKEVVESNPIPE------LLK-----LYVRFHDEAEQHPEMEDEARAWFNKLENGDEE 225

Query: 238 VQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPP 293
            Q + +  R++ LK  N  + +   E D   G+      +  +I+ L  +  + E     
Sbjct: 226 AQELWQWFRNESLKEFNRVYKLLDIEFDSLAGESFYSDKMNRVIELLEEKNLLKE----- 280

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERG 348
             SK  +  D++  ++             P L  K+DGS  Y   DLA   Y K  Y+  
Sbjct: 281 --SKGARIVDLEEYKM------------PPALITKNDGSTLYMTRDLAAAIYRKETYD-- 324

Query: 349 FDNMIYVMGSDHS----GYVKRLEAVA-------------------AAVSEKKAQINVLL 385
           FD  IYV+GS  +     + K +E +                      +S +K ++  L 
Sbjct: 325 FDKCIYVVGSQQNLHFQQWFKVIELMGYDWAKDLIHVGFGMVALEEGTMSTRKGRVVFLE 384

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
             L +       I ++K   +   +  +  +VG  +V F  L   NS + D+ F   +  
Sbjct: 385 DALNQAIDKTKEIILAKNP-NAKNVDEISKQVGVGAVVFQEL--SNSRIKDYTFSWERTL 441

Query: 446 SKENPVF-YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           S +     YVQY +ARC ++ R+A+ ++  D+D+ L         ++ D++E+  ++   
Sbjct: 442 SFDGETGPYVQYTHARCCAVLRKAEVEVTSDIDYSLL--------ADEDSAEVLRVIE-- 491

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            + + I  A    EP+ +  ++ DLA  F+  +    +NP L      N ++   RL LV
Sbjct: 492 SFNKNILLALKKNEPHIVTRFMLDLAQAFNKFY---HDNPIL----VENLEIRKARLALV 544

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A    + + L ++G+ +P  M
Sbjct: 545 LATKQTLENSLKLLGMHAPERM 566


>gi|196033964|ref|ZP_03101375.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|228945801|ref|ZP_04108147.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993644|gb|EDX57601.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|228813866|gb|EEM60141.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 562

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/621 (22%), Positives = 255/621 (41%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N+Y +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAQKLS-DPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    D     + ++  +      V  +VG  +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L        + ++  S ++L   L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL--------KDDYSWSVVKL---LNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|170719563|ref|YP_001747251.1| arginyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558809|sp|B1J2I3|SYR_PSEPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169757566|gb|ACA70882.1| arginyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 578

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +    D+    IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPASADISKAEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   KV I+  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G +V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDQVIRQNHVGDWGTQFGML 174



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LRH+ + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  FD    +++ Q +     E  L   LA++  ++ N      P+ L  YLYDLA
Sbjct: 478 K-----GFDEVEGHIVLQAAH----EQDLAARLAQFGEILNNVADKGTPHVLCTYLYDLA 528

Query: 530 SVFHGHWSH----GRENP-----RLRFVQANNRKL 555
            +F   + +      E P     RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETPEQQQSRLRLAALTGRTL 563


>gi|332981191|ref|YP_004462632.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332698869|gb|AEE95810.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 565

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 130/566 (22%), Positives = 232/566 (40%), Gaps = 78/566 (13%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIE 111
           L++ +  +P  IA+ I   IK    ++ +   G  ++N + + + + + +L  I+  G  
Sbjct: 45  LAKTMRKNPQLIAQEIADHIKKPNFIERIETKG-AYVNFFFNRAVFAQTVLEDILNKGER 103

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG +  G G+ + I+F + N   P H+GH R  V+G++L  +  F GY+     ++ D G
Sbjct: 104 YGSSDKGNGSVICIDFSAPNIAKPFHIGHLRSTVIGNSLYKIYEFLGYKCIGINHLGDWG 163

Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
            Q   L  +   W  +  L       P      +Y+K    + A+K  S  L      W 
Sbjct: 164 TQFGKLITAYKHWGIKDDLEKE----PIRALLDIYVKF--HDEAEKDPS--LEDEARMWF 215

Query: 231 PIVKDYSVQAM--MKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQG 284
             ++D   +A+   +  +D  L+  N  +D+   + D++ G+      +  +++ L  +G
Sbjct: 216 KRMEDGDEEALSLWRWFKDLSLREFNKIYDMLGVKFDYYTGESFYNDKMDRVVELLQEKG 275

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKC 343
            + E         +     +D  Q      M+         K+DG+  Y   D+ A    
Sbjct: 276 LLTE---------SQGALVVDLSQYDMPPCMIK--------KTDGTTLYATRDITAAIYR 318

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQ 380
           K    FD  +YV+      + ++L  V                          +S +K +
Sbjct: 319 KETFDFDKCLYVVAYQQDLHFRQLFKVIELMGFDWYDKLFHVPFGMVSMEEGTLSTRKGR 378

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           +  L   L +     + I   K  G       V  +VG  +V F  L     + + F + 
Sbjct: 379 VVFLEDVLQKAVDRTLDIIKEKNPG-LENKEDVAKQVGIGAVVFHDLINNRIKDIVFSWD 437

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           +V     E    YVQYA+AR  SI  +A + I  ++  DL   +            L+LI
Sbjct: 438 QVLNFDGETGP-YVQYAHARAMSILAKATQTITGEMGGDLLTED----------ETLELI 486

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA +P  IE A  A EP  +A +  D+A  F+  + +         V   + +L   R
Sbjct: 487 DLLARFPEAIEAACQANEPSIVARHTIDIAQAFNKFYKN-------HMVIVEDDELQRAR 539

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV+A A +I  GL ++G+++P +M
Sbjct: 540 LTLVYATAQVIRIGLGLLGIQAPAKM 565


>gi|255348827|ref|ZP_05380834.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503367|ref|ZP_05381757.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507045|ref|ZP_05382684.1| arginyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525499|emb|CBJ14976.1| arginyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435055|gb|ADH17233.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438775|gb|ADH20928.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 563

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L   L
Sbjct: 39  GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97

Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +    + +G            KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G     L   +    Q+A+                  H  ++L   Y  
Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+        ++V A+      D +AL +   I  +SE  F       I  I+D
Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  ++     D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   D+A  + + ++   D ++ V  S  S + + LEA   A     ++  +       
Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L  D    K   R+G+ I LR ++D                            +G ++++
Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEDLAYQGPILGINAIK 420

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         F F K+  + + N    + YAY R + I R+                
Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            +PQE      + +E  L + L  +P +++       P+ L  YLY L + F        
Sbjct: 468 SLPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L       +++G++++G+++ N +
Sbjct: 520 -NTFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563


>gi|326567939|gb|EGE18036.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 575

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 135/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGMNPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ +  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISRHANQANISRTLGVNTAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIKQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|166154668|ref|YP_001654786.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155543|ref|YP_001653798.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335938|ref|ZP_07224182.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|165930656|emb|CAP04153.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931531|emb|CAP07107.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 563

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L   L
Sbjct: 39  GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97

Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +    + +G            KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G     L   +    Q+A+                  H  ++L   Y  
Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+        ++V A+      D +AL +   I  +SE  F       I  I+D
Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  ++     D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   D+A  + + ++   D ++ V  S  S + + LEA   A     ++  +       
Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L  D    K   R+G+ I LR ++D                            +G ++++
Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         F F K+  + + N    + YAY R + I R+                
Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            +PQE      + +E  L + L  +P +++       P+ L  YLY L + F        
Sbjct: 468 SLPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L       +++G++++G+++ N +
Sbjct: 520 -NTFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563


>gi|296435982|gb|ADH18156.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437843|gb|ADH20004.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140343|gb|ADH97101.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 563

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 142/585 (24%), Positives = 224/585 (38%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L   L
Sbjct: 39  GHYQCNDAMKLARVLHKSPRAIAESIVAHIPPTP-FSSIEIAGAGFINFTFSKEFLASQL 97

Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +    + +G            KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G     L   +    Q+A+                  H  ++L   Y  
Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+        ++V A+      D +AL +   I  +SE  F       I  I+D
Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  ++     D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   D+A  + + ++   D ++ V  S  S + + LEA   A     ++  +       
Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L  D    K   R+G+ I LR ++D                            +G ++++
Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         F F K+  + + N    + YAY R + I R+     P          
Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRMGLESP---------- 469

Query: 484 VIPQESEFDT---SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             PQE        +E  L + L  +P +++       P+ L  YLY L + F        
Sbjct: 470 --PQEGPLAVHGPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L       +++G++++G+++ N +
Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563


>gi|257067855|ref|YP_003154110.1| arginyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256558673|gb|ACU84520.1| arginyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 588

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 231/587 (39%), Gaps = 89/587 (15%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           NAAM L++ LG  P  IA  IVA + +    ++  IAG GF+N+ L   ++    + +  
Sbjct: 42  NAAMGLAKRLGRKPRDIAAEIVAAVDLADIAETPEIAGPGFLNIRLRTDWVAAQAAELTA 101

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                G     +   V +++ + N    MHVGH R  VVGD++A  +   G+ V R+ +I
Sbjct: 102 PSAALGVPAPERAQTVVLDYSAPNVAKEMHVGHLRTTVVGDSIARTLEKLGHTVVRQNHI 161

Query: 168 NDAGAQINTLA---LSVFWRYQQA-LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
            D G     L    L V     +A L   D   P  +Y     K    E A         
Sbjct: 162 GDWGTPFGMLIEHLLEVGEDSAEAELLKTD---PNAFYQAARAKFDAAEAAGAADD---- 214

Query: 224 FPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID- 278
                      D++ +A  ++      D ++L I  ++  +S+  FHR     I D++D 
Sbjct: 215 ---------GSDFASRARARVATLQSGDAESLRIWTNLVELSKQYFHR-----IYDMLDV 260

Query: 279 NLARQGYVYEGILPPPKSKTTQKCD----------MDRKQLLFRSTMVG-DDVDRPLL-- 325
            L  +    E        +    CD           D    +F +   G D+   PL+  
Sbjct: 261 TLTDEHLAGESTY---NDQLAAVCDDLEAAGIARISDGALCVFPAGFTGRDEQPLPLIIR 317

Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-----GYVKRLEA--VAAAVSEK 377
           KSDG Y Y   DLA  + +  + G D + YV+GS         +    EA  +   V  +
Sbjct: 318 KSDGGYGYATTDLAALRHRVRDLGADRIGYVVGSAQELHFTMVFTSAREAGWLPEQVEAE 377

Query: 378 KAQINVLLCELVRLY--RDGMPIK-MSKRAGDFITLRHVVDE----------------VG 418
             +I  +L E  ++   R G  ++ M+         R V+DE                +G
Sbjct: 378 HVKIGSVLGEDGKILRTRSGSSLRLMALLEEAVAAARTVIDELRPDLPEAEREQIAHDIG 437

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              V++  L   +     FD  ++   +  N   Y+QYA AR RSI R+A          
Sbjct: 438 IGGVKYADLSTAHDSDYTFDLDRMLALTG-NTAPYLQYAVARIRSIGRKAAAQGVAAAPA 496

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               N          +E  L + L E+   + +     EP++L  YL+ LA  F   +  
Sbjct: 497 PHVEN---------DAERALALQLLEFGPTLVSVGAEFEPHRLCAYLFSLAQAFTSFY-- 545

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +P L+     + ++   RL L      ++  GL+ +GV +P +M
Sbjct: 546 -EASPILK---EADEQVRAGRLALAELTERVLVEGLDALGVNAPQQM 588


>gi|91218027|ref|ZP_01254978.1| arginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91183774|gb|EAS70166.1| arginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 592

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 133/583 (22%), Positives = 237/583 (40%), Gaps = 86/583 (14%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L R +  +P+ + E I   +     + S F   KGF+NL L+ SY + ++ S+       
Sbjct: 46  LLRHIKTNPVQLGEQIGEYLSKHSSLVSEFNVVKGFLNLSLTESYFKDLVVSMSQDENFG 105

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            R       KV +E+ S N   P+H+GH R  ++G ++A +   +G  V +   IND G 
Sbjct: 106 FRKATPTSQKVMVEYSSPNTNKPLHLGHIRNNLLGFSVAEIQKAAGKHVYKTQIINDRGI 165

Query: 173 QI--NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH-VGK---ELADKYSSELLNFPE 226
            I  + LA   F          + + PE    G+   H VGK   +    Y SE+ N  +
Sbjct: 166 HICKSMLAWQKF---------GEEETPES--SGLKGDHLVGKYYVKFDKAYKSEIENLLK 214

Query: 227 E--------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           E        K  PI+ + +   + K    DL+ + +   +       + G  +   ++  
Sbjct: 215 EGKTEEEAKKQAPILLE-AQNMLQKWEAGDLEVVKLWKTM---NKWVYEGFETTYTNLGV 270

Query: 279 NLARQGYVYEG-ILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           N  +  Y  +  IL     KT  +  +    D   +    +  G D ++ +L+SDG+  Y
Sbjct: 271 NFDKNYYESDTYILGKDHIKTGLETGVFFTKDDGSVWIDLSNEGLD-EKIVLRSDGTSVY 329

Query: 334 FAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+    +   +   D MIY +G++   + K L  +   +  + A+    L  L    
Sbjct: 330 MTQDIGTAIQRVTDYDIDEMIYTVGNEQDYHFKVLFLILKKLGFEWAE---HLYHLSYGM 386

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            D    KM  R G  +    +++E                             +G  +++
Sbjct: 387 VDLPSGKMKSREGKVVDADDLIEEMTSTARSISQELGKLEGYDDDEKNRLYKMIGLGALK 446

Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           + +L     + + FD  + V  Q    P  ++QY YAR +SI R+ K    DL+   +  
Sbjct: 447 YYILKVDPKKRILFDPKESVDFQGNTGP--FIQYTYARIQSILRKGKKESKDLNLSSY-- 502

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                  EF++ E  LI  L ++P +I+ A     P  +A Y+YDL   F+  + +    
Sbjct: 503 -------EFNSKEKSLIKILNQFPELIQQAAEQYSPALIANYVYDLVKEFNSFYQN---- 551

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  + A+       R++L   V  +I     ++G+E PN+M
Sbjct: 552 --VSILGADEEHQIEFRVELSRLVGEVIKKSFKVLGIEVPNQM 592


>gi|237802882|ref|YP_002888076.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274116|emb|CAX10910.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 563

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L   L
Sbjct: 39  GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97

Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +    + +G            KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G     L   +    Q+A+                  H  ++L   Y  
Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+        ++V A+      D +AL +   I  +SE  F       I  I+D
Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  ++     D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   D+A  + + ++   D ++ V  S  S + + LEA   A     ++  +       
Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L  D    K   R+G+ I LR ++D                            +G ++++
Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         F F K+  + + N    + YAY R + I R+                
Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            +PQE      + +E  L + L  +P +++       P+ L  YLY L + F        
Sbjct: 468 SLPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L       +++G++++G+++ N +
Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563


>gi|291044019|ref|ZP_06569735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291012482|gb|EFE04471.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 581

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 122/584 (20%), Positives = 242/584 (41%), Gaps = 76/584 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 34  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 93

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 94  RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 152

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 153 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 212

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 213 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 270

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 ++ ++D+L  +G   E       +K     +   K+        G+     + K
Sbjct: 271 ----DDLQPVVDDLVEKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 314

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383
             G + Y + DLA  + +  R     ++YV+    + + ++L   +  A    + A+   
Sbjct: 315 QGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEF 374

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +    + + +DG P K   R+GD + L  ++ E                           
Sbjct: 375 IGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKT 431

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A       +
Sbjct: 432 VGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------E 484

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +D     V+ +       E QL   L ++  V+++      P+ LA YLY  A++F   +
Sbjct: 485 WDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFY 539

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
                 P L+   A+       RLQL     + +  GL+++G++
Sbjct: 540 ---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 576


>gi|153810152|ref|ZP_01962820.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174]
 gi|149833331|gb|EDM88412.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174]
          Length = 584

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 123/600 (20%), Positives = 246/600 (41%), Gaps = 88/600 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V  RP  C       N AM  ++     P  IA+ +V+ +K         +   GFINL 
Sbjct: 26  VSNRPDLC---EFQCNGAMAGAKAYKKAPFMIADDVVSYLKDSQIFAMAEVVKPGFINLR 82

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   +L   L  +     +Y      K   + I++   N   P+HVGH R A++G+++  
Sbjct: 83  VKEEFLGDYLKKMAADE-KYSVKTAEKPKTIIIDYGGPNVAKPLHVGHLRSAIIGESIKR 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP---------- 202
           +  F G++V  + ++ D G Q+  +   +  R  + +Y +D+   EG YP          
Sbjct: 142 IGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDT--YEGEYPREAPFTISEL 199

Query: 203 -GVYLKHVGKELAD-KYSSELLNFPE--EKWLP---IVKDYSVQAMMKIIRDDLKALNIQ 255
             +Y    GK   D +Y +E L      ++  P    + ++ +Q  +  ++ +   LN+ 
Sbjct: 200 EEIYPCASGKSKEDEEYRNEALEATHQLQQGKPGYMALWNHIMQVSVTDLKRNYANLNVS 259

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E D     P    D++  +  QG+ YE                D+  L+     
Sbjct: 260 FDLWKKESDAQPYIP----DMVQKMKDQGFAYE----------------DQGALVVDVKE 299

Query: 316 VGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371
             D  + P   LLKSDG+  Y   DLA    + +    D ++YV+      +  ++   A
Sbjct: 300 ESDTKEIPPCMLLKSDGASLYTTTDLATIVERVKLFDPDEILYVVDKRQELHFIQVFRCA 359

Query: 372 AAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR- 429
                 K +  +       +  +DG P K   R G  + L +++ ++  +    ++  R 
Sbjct: 360 RKTGLVKPETKLSFLGFGTMNGKDGKPFKT--REGGVMRLENLIADIDEEMFHKIVENRS 417

Query: 430 -------KNSELLDFDFCK---VKEQSKENPVF--------------YVQYAYARCRSIF 465
                  + +E++     K   +  Q+ ++ VF              Y+ Y   R +SI 
Sbjct: 418 VKDQDAKETAEIVGLSAIKYGDLSNQATKDYVFDIDRFTSFEGNTGPYILYTIVRIKSIL 477

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            + K+   +L+       ++P     + S+  L++ L ++   IENA   + P+K+  Y+
Sbjct: 478 NRYKEEGGNLE----AGEILPA---VNASQKNLMLELTKFGSTIENAFEEKAPHKICAYI 530

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y++++ F+  +         + +   N+      L+L+     I+ + ++++G  +P+ M
Sbjct: 531 YEVSNAFNSFYHE------TKILSEENQAQKESFLKLLGLTKDILETSIDLLGFSAPDRM 584


>gi|240080907|ref|ZP_04725450.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240117776|ref|ZP_04731838.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240123331|ref|ZP_04736287.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240128034|ref|ZP_04740695.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268597025|ref|ZP_06131192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268603476|ref|ZP_06137643.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681956|ref|ZP_06148818.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268686424|ref|ZP_06153286.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268550813|gb|EEZ45832.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587607|gb|EEZ52283.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622240|gb|EEZ54640.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626708|gb|EEZ59108.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 572

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 127/590 (21%), Positives = 241/590 (40%), Gaps = 88/590 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHA-ALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   V +  +Q   N   +L               
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L   Y +  + F E+   P   D + + ++K+   D   L +         D       
Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239

Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320
            + D +    R   V     Y   L P      QK    + D  +++F        G+  
Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
              + K  G + Y + DLA  + +  R     ++YV+    + + ++L   +  A    +
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            A+   +    + + +DG P K   R+GD + L  ++ E                     
Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEA 416

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A  
Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                ++D     V+ +       E QL   L ++  V+++      P+ LA YLY  A+
Sbjct: 475 -----EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAAT 524

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +F   +      P L+   A+       RLQL     + +  GL+++G++
Sbjct: 525 LFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567


>gi|326561173|gb|EGE11538.1| arginyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 575

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 135/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ +  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISRHANQANISRTLGVNTAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203
           +   + F G  V R  ++ D G Q   L       Y + + N+D      SDL   Y   
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +     +  A K  + ++       L    +Y +    K++  D+     QH       
Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317
            + R + +  RD  D +     +Y  +LP        K    + D   ++F    +   G
Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D +   + K DG Y Y   D+A    +Y     + + ++ +D     + L A  A +  +
Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353

Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410
           KA    +  + E     + L +DG P K   R G  + L                     
Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIKQKNPD 411

Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                 R VV+ V   +V++  L +  +    FD+  +    + N   Y+QYAY R RSI
Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           F +A      LD       ++  E +    E  L V L ++  V+        P+ L  Y
Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   +      P L    +++ K    RL+L    A  +  GL ++G+++  +
Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574

Query: 585 M 585
           M
Sbjct: 575 M 575


>gi|76789190|ref|YP_328276.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237804804|ref|YP_002888958.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|109894982|sp|Q3KLP4|SYR_CHLTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76167720|gb|AAX50728.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273104|emb|CAX10017.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 563

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L   P  IAE IVA I   P   S+ IAG GFIN   S  +L   L
Sbjct: 39  GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97

Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            +    + +G            KV I+F S N    MHVGH R  ++GD LA   +F G+
Sbjct: 98  QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  +I D G     L   +    Q+A+                  H  ++L   Y  
Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278
               F E+        ++V A+      D +AL +   I  +SE  F       I  I+D
Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246

Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331
             L  +G   E    P  ++     D++ K L+  S     +  +    PL+  KSDG Y
Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   D+A  + + ++   D ++ V  S  S + + LEA   A     ++  +       
Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L  D    K   R+G+ I LR ++D                            +G ++++
Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         F F K+  + + N    + YAY R + I R+                
Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            +PQE      + +E  L + L  +P +++       P+ L  YLY L + F        
Sbjct: 468 SLPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N   R            RL L       +++G++++G+++ N +
Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563


>gi|71985061|ref|NP_001022551.1| aRginyl aa-tRNA syntheTase family member (rrt-1) [Caenorhabditis
           elegans]
 gi|21431831|sp|Q19825|SYRC_CAEEL RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|15789291|gb|AAA91224.2| Arginyl aa-trna synthetase protein 1, isoform a, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 713

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 137/584 (23%), Positives = 252/584 (43%), Gaps = 74/584 (12%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPS 96
           G    N+AM ++  L  +     P  +A+ I A++    D V+ + +   GFIN++L+  
Sbjct: 163 GDYQCNSAMPIAAKLKANKINKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTD 222

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           YLR+ +S +   G++  + L  K  +V ++F S N    MHVGH R  ++GD++  L   
Sbjct: 223 YLRRQISLLASEGVKLPK-LTRK--RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEA 279

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G++V R  +I D G Q   L   ++ R+   L      LP+      + K   K     
Sbjct: 280 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFL----KKLPDISDLQAFYKESKKRF--- 332

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRD 275
              E   F +  +  +VK  S         D +KA N   D+    +   +      I+D
Sbjct: 333 --DEDEQFKKRAYEYVVKLQSHDG------DIVKAWNTICDVSKKYNQIVYNYLDIKIKD 384

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           +      + +  + ++   K   T K DM    D +Q++F +   G D+   ++KSDG +
Sbjct: 385 V-----GESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPT---GCDIPLTVVKSDGGF 436

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-------------GY----VKRLEAVAAA 373
           TY  +DLA  K +  E   D  IYV+ S  S             G+    ++R+E VA  
Sbjct: 437 TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496

Query: 374 V------------SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           +            S +  ++  LL E V+   + +  K  + A     L    D V    
Sbjct: 497 LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V++  L    ++   F F ++ E  + N   Y+ YAY R +SIF + +    DL   +  
Sbjct: 557 VKYADLSHTRTQDYVFSFDRMLE-DRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAS 615

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +P +   +    + ++ L++   ++ ++ +    +++  Y+Y LA++FH  ++   E
Sbjct: 616 TPTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLML---HQMCDYVYQLATLFHDFYN---E 669

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   +     + M RL L      ++++   I+G+   N+M
Sbjct: 670 CYVIENKEGEKPFVHMHRLALCDVTRKVMSTCFKILGLREVNKM 713


>gi|90076998|dbj|BAE88179.1| unnamed protein product [Macaca fascicularis]
          Length = 380

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 165/344 (47%), Gaps = 38/344 (11%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 39  GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 98

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++G++++ L  F+
Sbjct: 99  VSEQLTSLLVNGVQL--PAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 156

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
           GY+V R  ++ D G Q   L   +  ++   L  +    DL + +Y     +   +E   
Sbjct: 157 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 215

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           K + + +   + K   I K + +  +  + R +   +    D+ + E    RG+      
Sbjct: 216 KRAYQCVVLLQGKNPDITKAWKL--ICDVSRQEFNKIYDALDVSLIE----RGESFYQDR 269

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + DI+     +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 270 MNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 311

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           Y  +DLA  K +  E   D +IYV+ S  S + + + A A  + 
Sbjct: 312 YDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIG 355


>gi|1217668|gb|AAB35627.1| arginyl-tRNA synthetase [Homo sapiens]
          Length = 659

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 137/609 (22%), Positives = 253/609 (41%), Gaps = 114/609 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +++   +    G    N+AM +S+ L      ++P   AE I   +     +  V  AG 
Sbjct: 100 LLVTPSQQAKFGDYQCNSAMGISQMLKTKEPEVNPGEFAENITKHLPAMDVLKRVEFAGP 159

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN +L   ++ + L+S++V+G++     +G+  KV ++F S N    MHVGH R  ++
Sbjct: 160 GFINGHLRKDFVSEQLTSLLVNGVQL--PALGENKKVIVDFSSPNIAKEMHVGHLRSTII 217

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187
           G++++ L  F+GY+V R  ++ D G Q   L                    L VF++  +
Sbjct: 218 GESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESK 277

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             ++ + +  +  Y  V L   GK             P+     I K Y +  M  + R 
Sbjct: 278 KRFDTEEEFKKRAYQCVVLLQ-GKN------------PD-----ITKAYLL--MSDVSRQ 317

Query: 248 DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +L  +    D+ + E    RG+      + DI+     +G+V              + D 
Sbjct: 318 ELNKIYDALDVSLIE----RGESFYQDRMNDIVKEFEDRGFV--------------QVD- 358

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGY 363
           D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S +
Sbjct: 359 DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVH 415

Query: 364 VKRLEAVAAAV-------------------SEKKAQINVLLCELVRLYR---DGMPIKMS 401
            + + A A  +                    E K +      E VRL     +G+   M 
Sbjct: 416 FQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMD 475

Query: 402 K---RAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           K   +  D +     L      V    +++  L         F F K+ +  + N   Y+
Sbjct: 476 KLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYL 534

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIEN 511
            YA+ R RSI R A     ++D ++  +    +E++       E +L   +  +P +++ 
Sbjct: 535 LYAFTRIRSIARLA-----NIDEEMLQKAA--RETKILLVHEKEWKLGRCILRFPEILQK 587

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                  + L  Y+Y+LA+ F   +       + R       K+ M R+ L   VA+++ 
Sbjct: 588 ILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQT-GKILKVNMWRI-LCETVAAVMA 645

Query: 572 SGLNIIGVE 580
            G + +G++
Sbjct: 646 KGFDTLGIK 654


>gi|307104781|gb|EFN53033.1| hypothetical protein CHLNCDRAFT_26194 [Chlorella variabilis]
          Length = 601

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 125/546 (22%), Positives = 219/546 (40%), Gaps = 69/546 (12%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +VA +     V    +AG GFIN+ +SP +L   L++++  GI         
Sbjct: 95  NPRAVAEALVAHLPETGMVAETSLAGPGFINIRISPDWLASHLTTMLRQGISTWAPAGYA 154

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V ++F S N    MHVGH R  ++GDTLA  + F G +V R  +I D G Q   L  
Sbjct: 155 GRRVVVDFSSPNVAKEMHVGHLRSTIIGDTLAHTLEFCGADVLRLNHIGDWGTQFGMLIQ 214

Query: 180 SVFWRYQQAL-YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            +  +  + L   +D D+              ++L   Y +    F EE+        +V
Sbjct: 215 YIAEKRPEGLNAASDEDV--------------QDLQVLYRAAKQRFDEEEAFKQRAREAV 260

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-----RQGYVYEGILPP 293
             +     + L+A   Q     S  +F +        I D L      R    Y  +L P
Sbjct: 261 TELQGGRPEYLQACAWQRICDASRREFQK--------IYDRLGVQLQERGESFYNPMLKP 312

Query: 294 PKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349
                 Q+    + D  + +F   + G  +   + KSDG + Y + D+A  K + E    
Sbjct: 313 VVDDLMQRGIAEESDGAKCVF---VEGAQIPLIVQKSDGGFGYASTDMAAVKHRIETEKA 369

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVS-----------EKKAQINVLLCELVRLYRDGMPI 398
           D +IYV     S +   +                     ++   V L EL+   +  +  
Sbjct: 370 DWIIYVTDMGQSSHFDLVGGGGRGHGGGGGGGDGKKFRSRSGDVVRLVELLDEAKQRIVD 429

Query: 399 KMSKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQ 455
            + +R  D     +  +   +G  +V++  L  KN    ++ F      S++ N   Y  
Sbjct: 430 TVKERRPDATPEEIEEMAAAMGYGAVKYADL--KNHRTTNYKFSYDDMLSQQGNTAVYQL 487

Query: 456 YAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           YA+AR  SI R++ +D+    +     R V+  E      E+ L + +A +   ++    
Sbjct: 488 YAHARIASIVRKSGRDVS---ELAKTARVVLGHE-----KEVALALQIARFSDAVDECLA 539

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+++  YLYDL++ F+  ++           Q         RL L  A A  + +  
Sbjct: 540 ELLPHRITEYLYDLSTAFNQFYTE---------CQVVGSPEEDSRLLLCEATALTMRTCF 590

Query: 575 NIIGVE 580
            ++G++
Sbjct: 591 QLLGIQ 596


>gi|257869595|ref|ZP_05649248.1| arginyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803759|gb|EEV32581.1| arginyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 563

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 258/597 (43%), Gaps = 104/597 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINL 91
           ++E P+   HG ++   A  L++     P  IA  +    KIDP   + + + G  ++N 
Sbjct: 27  LLENPKTAEHGDVAF-PAFALAKVYRKAPQQIASELAE--KIDPASFEKIEVVGP-YLNF 82

Query: 92  YLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +++   + + +L +++     YG   IG    V I+  S N   P+ +GH R  V+G+++
Sbjct: 83  FMNKEVISEHVLQTVLKEKNHYGDQSIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSI 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHV 209
             ++   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++  
Sbjct: 143 GFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKKE----PINELLRLYVEFH 198

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFH 266
            +   DK     L      W   ++D   +A  + +  RD+ L+  N  +D+   E  F 
Sbjct: 199 EQAENDK----ALEDEARAWFKKLEDGDQEATELWQWFRDESLQEFNKIYDML--EVSF- 251

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321
                      D+L  + +           K T+  ++  ++ L +     + VD     
Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLQEDQGAEIVDLTAYD 292

Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370
             P L  KSDG+  Y   D+A   Y K  Y   F   +YV+G++ S + K+L+AV     
Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K +I VLL E++    +    +++++         
Sbjct: 351 FDWSDDMHHIPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIESAKEQITEKNPGLANKDE 409

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY++AR  SI  +A+
Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKAQ 465

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDL 528
                  FD  P N   Q    + +E   ++ L + YP  I  A    EP  +A +   L
Sbjct: 466 -------FD--PANA--QALALNDAESWEVIKLIQRYPETILQAADKYEPSVIAKHAIKL 514

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ ++++      ++ +  + +K    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 515 AQAFNKYYAN------VKILAEDAQKDA--RLALVYAVTVLLKEDLRLLGLHAPDKM 563


>gi|312886568|ref|ZP_07746176.1| arginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311300971|gb|EFQ78032.1| arginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 589

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 135/572 (23%), Positives = 235/572 (41%), Gaps = 132/572 (23%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+N+ ++ +Y  K L +  ++G  +G     KG KV +E+ S N   P+H+GH R  +
Sbjct: 78  KGFLNISITDAYWIKQLYT-EIAGDGFG-TFPAKGEKVMVEYSSPNTNKPLHLGHIRNNL 135

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G ++A ++  +GY+V +   +ND G  I    L+  W   Q   N ++    G      
Sbjct: 136 LGYSVAEILKANGYDVIKANLVNDRGIHICKSMLA--W---QKFGNGETPESTG------ 184

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI------F 259
           LK  G  L  KY           ++   + Y  Q       D LKA     D       F
Sbjct: 185 LK--GDHLVGKY-----------YVVFDQQYKKQI------DQLKAEGQTEDEAKKNAPF 225

Query: 260 ISE-----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           I E     + +  GDP  I  + + +   G+VY G      ++T +K  +D  Q  + S 
Sbjct: 226 IIEAQQMLEKWEAGDPEVIS-LWETM--NGWVYAGF-----AETYKKLGVDFDQYYYESK 277

Query: 315 --MVGDDV----------------------------DRPLLKSDGSYTYFAADLAYFKCK 344
             ++G D+                            ++ +L+++G+  Y   D+   + K
Sbjct: 278 TYLLGKDIVDEGLAKGVFFKKEDGSVWIDLTADGLDEKLVLRANGTSVYITQDVGTAQLK 337

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           Y +   D  IYV+G++   + K L  +   + +  AQ    L  L     D    KM  R
Sbjct: 338 YNDYHMDKSIYVVGNEQDYHFKVLFLILQKLGKSWAQ---GLFHLSYGMVDLPSGKMKSR 394

Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434
            G  +    ++ E                             +G  ++++ +L  +  + 
Sbjct: 395 EGTVVDADDLMAEMEQTAKAQTELLGKVNDFDEDEKKQLYHNIGMGALKYFLLKVEPKKR 454

Query: 435 LDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
           L FD  + +  Q    P  ++QY +AR +S+ ++A        F     N      E DT
Sbjct: 455 LLFDPNESIDFQGHTGP--FIQYTHARIKSVLKRA-------GFKSGQTN--GGTKELDT 503

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E +LI+ L +YP  I  A     P  +A Y+Y+LA  ++  +   +E P L+   A + 
Sbjct: 504 VERELILALNQYPDAIMQAARDYSPAIIANYVYELAKTYNKFY---QEKPILK---AEDE 557

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   RL+L  A A II+  ++++G+  P  M
Sbjct: 558 IIMQFRLELSAASAKIISKAMSLLGINVPERM 589


>gi|260440708|ref|ZP_05794524.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 572

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 122/584 (20%), Positives = 242/584 (41%), Gaps = 76/584 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             AD     +  L   +E  L + K   D S+     +   D   L ++ +    E  ++
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 ++ ++D+L  +G   E       +K     +   K+        G+     + K
Sbjct: 262 ----DDLQPVVDDLVEKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 305

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383
             G + Y + DLA  + +  R     ++YV+    + + ++L   +  A    + A+   
Sbjct: 306 QGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEF 365

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +    + + +DG P K   R+GD + L  ++ E                           
Sbjct: 366 IGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKT 422

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A       +
Sbjct: 423 VGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------E 475

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +D     V+ +       E QL   L ++  V+++      P+ LA YLY  A++F   +
Sbjct: 476 WDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFY 530

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
                 P L+   A+       RLQL     + +  GL+++G++
Sbjct: 531 ---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567


>gi|262167694|ref|ZP_06035397.1| arginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262023899|gb|EEY42597.1| arginyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 592

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 235/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 42  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 101

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  +N++        ++ + N    MHVGH R  ++G
Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKNIVA-------DYSAPNVAKEMHVGHLRSTIIG 154

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 573 TAKTIKQGLALLGIDTLERM 592


>gi|152975407|ref|YP_001374924.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024159|gb|ABS21929.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 562

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 138/609 (22%), Positives = 253/609 (41%), Gaps = 129/609 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFIN 90
           +IE P+    G  +      L++     P  IA+ I + +K      V++V      ++N
Sbjct: 27  LIETPKQDEFGD-AAFPCFTLAKQYKKAPAQIAKDIASELKGSFFKKVEAV----GPYVN 81

Query: 91  LYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           ++ + S +   IL +I+    +YG++  G+   V I++ S N   P  +GH R  ++G+ 
Sbjct: 82  IFYNRSVVSNHILKTILAEKEKYGQHHFGQEKTVVIDYSSPNIAKPFSMGHLRSTMIGNA 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +    GYEV    YI D G Q   L ++ + ++       +  + E +         
Sbjct: 142 LKHIAEKCGYEVVGINYIGDWGTQFGKL-ITAYKKWGNKDLVKEDPIRELF--------- 191

Query: 210 GKELADKYSSELLNFPEEK-----WLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFIS 261
             +L  ++  E+   PE +     W   ++D   +A+        + LK  +  +++   
Sbjct: 192 --QLYVQFHEEVKENPELEEEGRIWFKKLEDNDEEAVFLWNWFRHESLKEFSRIYELLGV 249

Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           E +  +G+      + + ++ L  +G + E       S   Q  ++D + +         
Sbjct: 250 EFENFQGEAFYNDKMDEFVEMLEEKGILEE-------SDGAQVVNLDEENM--------- 293

Query: 319 DVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
               P L  KSDG+  Y   DL    Y +  Y  GFD  +YV+G++ S +          
Sbjct: 294 ---PPCLIRKSDGATLYATRDLTAALYRQNTY--GFDKALYVVGAEQSLHF--------- 339

Query: 374 VSEKKAQINVLLCELVRLYRDGM---PI--------KMSKRAGDF------------ITL 410
                AQ   +L +L   + +GM   P         KMS R G              +  
Sbjct: 340 -----AQFFTVLKQLGYTWVEGMQHVPFGLILKDGKKMSTRKGKVVLLEEVLEEAIALAQ 394

Query: 411 RH-------------VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQY 456
           +H             V  +VG  ++ F  L  +    ++F   K +K + +  P  YVQY
Sbjct: 395 QHIEEKNPSLKQKAEVAKQVGVGAIIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            +AR  SI R+    F    F L          ++  + L+L   L ++P+VIE A    
Sbjct: 453 THARACSILRKEHVEFETATFAL--------NDDYSWNTLKL---LNQFPQVIETAFTKN 501

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  Y+ D+A  F+ ++ +      +R ++ ++ K +  RL LV+AV  ++  GL +
Sbjct: 502 EPSHITKYILDVAQAFNKYYGN------VRILEDDHEKES--RLALVYAVTIVLKEGLRL 553

Query: 577 IGVESPNEM 585
           +G+ +P EM
Sbjct: 554 LGIGAPEEM 562


>gi|59801352|ref|YP_208064.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|75355970|sp|Q5F835|SYR_NEIG1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|59718247|gb|AAW89652.1| putative arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 572

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 126/592 (21%), Positives = 240/592 (40%), Gaps = 92/592 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   V +  +Q   N   +L               
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L   Y +  + F E+   P   D + + ++K+   D   L +         D       
Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239

Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320
            + D +    R   V     Y   L P      QK    + D  +++F        G+  
Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375
              + K  G + Y + DLA  + +  R     ++YV+    + + ++L   +        
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
           + KA+    +     + +DG P K   R+GD + L  ++ E                   
Sbjct: 360 DAKAE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAD 414

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A
Sbjct: 415 EAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKA 473

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                  ++D     V+ +       E QL   L ++  V+++      P+ LA YLY  
Sbjct: 474 G------EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQA 522

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           A++F   +      P L+   A+       RLQL     + +  GL+++G++
Sbjct: 523 ATLFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567


>gi|118444117|ref|YP_877668.1| arginyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134573|gb|ABK61617.1| arginyl-tRNA synthetase [Clostridium novyi NT]
          Length = 563

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 227/550 (41%), Gaps = 115/550 (20%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    L   IL+ ++  G  YG + IG+G  V I++ S N   P HVGH     +
Sbjct: 77  YLNFFMDKGSLTSDILNKVLEEGDNYGSSKIGEGKNVTIDYSSPNIAKPFHVGHLFSTSI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G+ L  ++ F GY      ++ D G Q   L +S +  W   +AL  +    P      +
Sbjct: 137 GNALYRMLNFEGYNSIGINHLGDWGTQFGKL-ISAYKRWSDDEALEKD----PIKELLRI 191

Query: 205 YLK-HVGKE----LADK---YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALN 253
           Y+K H   E    L D+   Y  +L +  +E+   W    K  S++   K+       L 
Sbjct: 192 YVKFHDEAEKDPSLEDEGRMYFKKLEDGEKEEVELW-ERFKTLSLKEFEKV----YDTLG 246

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++ D +  E  ++    + I++I D         +G+L                    + 
Sbjct: 247 VKFDSYAGESFYNDKMDAVIKEIDD---------KGLLVESNGA--------------KV 283

Query: 314 TMVGDDVDRP--LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            M+ +D   P  ++K DG+  Y   DLA   Y K  Y+  F   IYV+GSD S + K++ 
Sbjct: 284 VMMDEDNIPPCIIVKGDGATIYATRDLAAAFYRKKNYD--FHKSIYVVGSDQSLHFKQVF 341

Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                +    A+    +   LVR        K+S R G  I L  +++E  S ++   ++
Sbjct: 342 KTIEKMGYDWAKDCKHVAFGLVRF----ADKKLSTRKGQVIFLEDLLNESVSKTLE--VI 395

Query: 428 WRKNSELLDFD------------FCKVKEQSKENPVF--------------YVQYAYARC 461
             KN EL + +            F  +K + +++ VF              YVQY YAR 
Sbjct: 396 NEKNPELENKEEVAKKVGIGAVIFTYLKNKREKDIVFNWNEMLNFEGETGPYVQYTYARG 455

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           +SI R+A +I  ++++                 E +L+  L      I NA    EP  L
Sbjct: 456 KSILRRAGEIGEEVNYAALN----------SKEEFELVKVLGNLQEAILNAIDKLEPSIL 505

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM------MRLQLVHAVASIINSGLN 575
             Y  ++A  F+            +F  A+N   T        RL+LV A   +I +GLN
Sbjct: 506 TRYTIEVAKAFN------------KFYNAHNIMATEDVATKNARLKLVEATCQVIKNGLN 553

Query: 576 IIGVESPNEM 585
           ++G+E   +M
Sbjct: 554 LLGIEVVEKM 563


>gi|315641208|ref|ZP_07896285.1| arginine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482975|gb|EFU73494.1| arginine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 563

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 138/593 (23%), Positives = 255/593 (43%), Gaps = 96/593 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++     +L++     P  IA  +  ++  +  V+ V   G  +IN +
Sbjct: 27  LLENPKSVDHGDVAF-PTFLLAKAFRKAPQAIAGELAEQLTSEY-VEKVEAVGP-YINFF 83

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +S   + + IL   +V+   YG + IG    V I+  S N   P+ +GH R  V+G++L 
Sbjct: 84  MSKKTISQAILHEALVADSHYGDSSIGNHESVPIDMSSPNIAKPISMGHLRSTVIGNSLG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            ++   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FILEKVGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAQ----PINELLRLYVEFHE 199

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
           +   DK     L      W   +++   +A  + K  R++ LK  N  + +     D + 
Sbjct: 200 RAEEDK----ALEDEARAWFKKLEESDEEAVHLWKWFREESLKEFNKIYTMLEVSFDSYN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGDDVDRP 323
           G+      + +I+  L  +  + E           Q  D+ D  Q          D++  
Sbjct: 256 GEAFYNDKMDEIVTLLEEKHLLQE----------DQGADIVDLSQY---------DLNPA 296

Query: 324 LL-KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L+ KSDG+  Y   D+A   Y K  Y+  F   +YV+G++ + + K+L+AV         
Sbjct: 297 LIRKSDGATLYITRDMAAALYRKRTYQ--FAKSLYVVGNEQTYHFKQLKAVLKEMGFEWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         +++++         V  +
Sbjct: 355 DDMYHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAVASAQQQIAEKNPSLANKEEVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIF- 472
           VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI  +A   F 
Sbjct: 414 VGIGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYTHARAMSILTKAAFTFN 469

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           PD  + L            D +  +++  +  YP V++ A    EP  +A +   L+  F
Sbjct: 470 PDATYALA-----------DDASWEVVKLIQAYPDVVQAAADKYEPSVIAKHAIKLSQAF 518

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++++       + +  +  K +  RL LV AVA ++   L ++G+ +P +M
Sbjct: 519 NKYYAN------TKVLAEDGEKDS--RLALVKAVAILLKEDLRLLGLHAPEKM 563


>gi|325103508|ref|YP_004273162.1| arginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324972356|gb|ADY51340.1| arginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 590

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 136/630 (21%), Positives = 251/630 (39%), Gaps = 138/630 (21%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I +E+ +    GH  T       R     P   A+++   +K +      F   KGF+N
Sbjct: 24  QITLEQTKKEFEGH-QTLVVFPFVRQTKKSPEQTAQILGEYLKENYKEIESFNVIKGFLN 82

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +  S ++   +  +  +S  ++ + +   G KV +E+ S N   P+H+GH R  ++G ++
Sbjct: 83  IVYSDAFWLNVFQT-EISADDFAQ-MPFNGEKVMVEYSSPNTNKPLHLGHIRNNLLGFSV 140

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------GY 200
           A L+  SGY+V +   +ND G  I    L+  W   Q   N ++  PE          G 
Sbjct: 141 AELLKASGYQVIKANLVNDRGIHICKSMLA--W---QKFGNGET--PESSGLKGDHLVGK 193

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--------KIIR------ 246
           Y  ++ K   KE+    +        +K  P++K+   QAM+        ++I+      
Sbjct: 194 YYVIFDKEYKKEIEGLKAQGKTEEEAKKEAPLIKE--AQAMLLKWEQGDQEVIQLWKTMN 251

Query: 247 --------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                   +  K L +  D F  E D +       +DI++    +G  ++      K   
Sbjct: 252 SWVYAGFEETYKELGVNFDKFYYESDTYLLG----KDIVEEGLAKGVFFK------KEDN 301

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
           +   D+             D +D  L+ + DG+  Y   DL   + KY E G D  IYV+
Sbjct: 302 SVWIDLTE-----------DGLDEKLVRRGDGTSVYITQDLGTAQLKYDEFGVDRSIYVV 350

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM-----------PIKMSKRAG 405
           G++   + K L               ++L +L + + DG+             KM  R G
Sbjct: 351 GNEQDYHFKVL--------------FLILKKLGKTWADGLYHLSYGMVDLPSGKMKSREG 396

Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436
             +    +++E                             +G  ++++ +L  +  + L 
Sbjct: 397 TVVDADDLIEEMRVTAKEKTEALGKVDHFDDEEKEKLYHMIGMGALKYFLLKVEPKKRLL 456

Query: 437 FDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           FD  + +  Q    P  ++QY++AR +S+  +A        +D    + +  E +   +E
Sbjct: 457 FDPKESIDFQGNTGP--FIQYSHARIKSVLNKA-------GYDNQNISTVNPE-KLQETE 506

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           L+LI  L+ YP V+  A     P  +A Y YDLA  ++  +           ++  +  L
Sbjct: 507 LELIQVLSRYPSVLNAAARDFNPGAIANYTYDLAKAYNKFYQSE------TILKVEDADL 560

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL+L +  A  I   + ++G+E P  M
Sbjct: 561 KTFRLKLSYHTADTIRKAMALLGIEVPERM 590


>gi|317476441|ref|ZP_07935690.1| arginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907467|gb|EFV29172.1| arginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 605

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 259/633 (40%), Gaps = 132/633 (20%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   ++ +    S F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSTFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I     +YG  +   K   V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHADA-QYGVVSATDKSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++A +G +V +   +ND G  I    L+  W     L   + + PE          G
Sbjct: 145 LANIIAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPETSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------- 247
            Y   + KH     KEL  K+  E L+  E K     K  S   +MK  R+         
Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQGEGLSEEEAK----AKAESESPLMKEAREMLVKWEAND 253

Query: 248 -DLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303
            +++AL   +   +++  D+ +R     +    D +  +   Y EG     K K  +  +
Sbjct: 254 PEVRALWKKMNDWVYVGFDETYR----MMGVTFDKIYYESETYLEG-----KEKVMEGLE 304

Query: 304 MDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
              K   +R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D MIY
Sbjct: 305 ---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMIY 361

Query: 355 VMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           V+G++ +                          G V+  E    +        + L+ E+
Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFDWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEM 421

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMML---WRKN-----S 432
           +   ++         +G+   L  +  E        VG  ++++ +L    RKN      
Sbjct: 422 INTAKE--------TSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKNMTFNPK 473

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           E +DF+          N   ++QY YAR +S+ R+AK+    +   L      P   E  
Sbjct: 474 ESIDFN---------GNTGPFIQYTYARIQSVLRKAKEAGITVPAQL------PSGIELS 518

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V++ A     P  +A Y YDL   ++  +           ++  N
Sbjct: 519 EKEEGLIQMIADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREEN 572

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 573 EAVKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|229917757|ref|YP_002886403.1| arginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511646|sp|C4L0Z5|SYR_EXISA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229469186|gb|ACQ70958.1| arginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 560

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 253/595 (42%), Gaps = 85/595 (14%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  +IE+P+  AHG L+      L++     P+ IA  I   +  D     V 
Sbjct: 17  EELTIDQIEALIEKPKHEAHGDLAF-PCFQLAKAYRKAPVMIATDIANELN-DELFTKVE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            AG  ++N++LS   + K I+++++    EY  +     T V  +F S N   P  +GH 
Sbjct: 75  AAGP-YVNVFLSRDVVSKEIINTVLEEKSEYATHEARNETIVT-DFSSPNIAKPFSMGHL 132

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGY 200
           R  V+G+ +  +   +GY+V    ++ D G Q   L ++   W  ++A+  N    P   
Sbjct: 133 RSTVIGNAINQIARKNGYDVVGVNHLGDWGTQFGKLMVAYKKWGDEEAVRAN----PIAE 188

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHD 257
              +Y+ H  +E   K   EL +     W   ++D   +A  + +  RD+ LK     +D
Sbjct: 189 LLKLYV-HFHEEA--KTQPELED-EGRAWFKKLEDGDAEATELWQWFRDESLKEFQKVYD 244

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +   + +   G+        D + R   + E      +S+      ++ + L        
Sbjct: 245 LLGVKFESFNGEAF----YNDKMGRVVEMLEAKNLLVESEGAMVVSLEEENL-------- 292

Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---- 370
                P L  K DG+  Y   DLA    +YE   F    YV+G + + + K+L +V    
Sbjct: 293 ----PPCLIKKKDGATLYATRDLAAAIYRYETYNFVQANYVVGGEQALHFKQLFSVLRKL 348

Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                                 +S +K +I VLL E+++   +     + ++  D    +
Sbjct: 349 GYDFVDGMHHVPFGLILQEGKKMSTRKGRI-VLLEEVLKEAIEKAQANIEQKNPDLANAQ 407

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
            V   VG  +V F  L  +    ++FD    +K + +  P  YVQY  AR  S+ R+   
Sbjct: 408 DVARMVGVGAVVFHDLKNERINNIEFDLDSMLKFEGETGP--YVQYTNARANSLLRKG-- 463

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                ++D  P          D     ++  L  +P VI  A   +EP  ++ Y+ DLA 
Sbjct: 464 -----NYDGSPFT-----GADDDYSWGVVTMLNAFPHVITRAHERREPSIISRYVLDLAQ 513

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+ ++ H      +R ++ +  K +  RL LV AV  ++  GL ++GVE+P EM
Sbjct: 514 AFNKYYGH------VRVLEEDAGKQS--RLALVKAVTLVLTEGLRLLGVEAPEEM 560


>gi|149244104|ref|XP_001526595.1| arginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146448989|gb|EDK43245.1| arginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 672

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 223/551 (40%), Gaps = 90/551 (16%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FI  + + S +   ++  ++    EYG   +G G K  +EF S N   P H GH R  ++
Sbjct: 159 FIQFFFNRSLVYDLVIKDVLKRKTEYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 218

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204
           G  +++L    G+EV R  Y+ D G Q   LA+  F +Y  ++ L  +    P  +   V
Sbjct: 219 GGFISNLYEKLGWEVVRINYLGDWGKQFGLLAVG-FEKYGSEEQLAKD----PINHLFEV 273

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA----------MMKIIRDDLKALNI 254
           Y+K V  ++ ++ +SE    P         +  VQA            ++   D  AL I
Sbjct: 274 YVK-VNNDVREE-ASEATGEPAVADAADADEKKVQASSTNEKARQFFRRMEDGDESALKI 331

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK-------C 302
                     + R     I   ID  AR    Y     E  +P  K K   K        
Sbjct: 332 ----------WRRFRDLSIDKYIDTYARLNIKYDYYSGESQVPQEKMKEATKLFEDKGLV 381

Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            +DR   L   T     + + L+ KSDG+  Y   D+     +YE   FD MIYV+ S  
Sbjct: 382 HVDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIASQQ 441

Query: 361 S---------------GYVKRLE----AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                            + K LE     +   +S +K  + V L  +++  ++ M   M 
Sbjct: 442 DLHCQQFFEILKQMGFEWAKNLEHINFGMVQGMSTRKGNV-VFLDNILQETKEKMHDVMK 500

Query: 402 KRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYA 457
           K A  +  +     + + VG  +V  M+   ++  +L+++F   +  S E     Y+QYA
Sbjct: 501 KNADKYAQIEEPDKIAELVGISAV--MIQDFQSKRILNYEFKWDRMTSFEGDTGPYLQYA 558

Query: 458 YARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           ++R  S+ R++   ++   + +FDL            +     L+  L +YP +I  A+ 
Sbjct: 559 HSRLSSMQRKSDISEEELENANFDLLT----------EPCAANLVRTLLQYPDIIRRASH 608

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  YL+ L  +    +        + +V    R++   RL L  A   +I +G+
Sbjct: 609 NNEPSTIVTYLFTLCHIVSQCYD-------ILWVAGQEREVATARLALYAATKQVIYNGM 661

Query: 575 NIIGVESPNEM 585
            ++G+     M
Sbjct: 662 TLLGLTPVERM 672


>gi|194098399|ref|YP_002001457.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998805|ref|ZP_04718729.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014279|ref|ZP_04721192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016715|ref|ZP_04723255.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240115482|ref|ZP_04729544.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240121842|ref|ZP_04734804.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240125580|ref|ZP_04738466.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|254493590|ref|ZP_05106761.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268594648|ref|ZP_06128815.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268601156|ref|ZP_06135323.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268684169|ref|ZP_06151031.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|293399211|ref|ZP_06643376.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|238690193|sp|B4RL22|SYR_NEIG2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193933689|gb|ACF29513.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|226512630|gb|EEH61975.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268548037|gb|EEZ43455.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268585287|gb|EEZ49963.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268624453|gb|EEZ56853.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291610625|gb|EFF39735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|317164093|gb|ADV07634.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 572

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 126/590 (21%), Positives = 241/590 (40%), Gaps = 88/590 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + +  ++   +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   V +  +Q   N   +L               
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L   Y +  + F E+   P   D + + ++K+   D   L +         D       
Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239

Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320
            + D +    R   V     Y   L P      QK    + D  +++F        G+  
Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
              + K  G + Y + DLA  + +  R     ++YV+    + + ++L   +  A    +
Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            A+   +    + + +DG P K   R+GD + L  ++ E                     
Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEA 416

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A  
Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                ++D     V+ +       E QL   L ++  V+++      P+ LA YLY  A+
Sbjct: 475 -----EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAAT 524

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +F   +      P L+   A+       RLQL     + +  GL+++G++
Sbjct: 525 LFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567


>gi|254519810|ref|ZP_05131866.1| arginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913559|gb|EEH98760.1| arginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 563

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 131/574 (22%), Positives = 236/574 (41%), Gaps = 95/574 (16%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIE 111
           L++     P  I+E +    KID D     I    ++N +   S + +  +  ++  G E
Sbjct: 44  LAKTFRKAPNMISEELAG--KIDNDGFEKIINVGPYVNFFADKSVFTKNTIEKVLAEGDE 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  + +E+ S N   P HVGH     +G++L  +    GY V    ++ D G
Sbjct: 102 YGSSNVGEGKTICVEYSSPNIAKPFHVGHLFTTAIGNSLYKIFKKEGYTVEGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            Q   L +S +  W  ++AL  N  D        +Y+K   +   D     LL      +
Sbjct: 162 TQFGKL-ISAYKRWGNEEALEKNAID----ELLRIYVKFHDEAEKDP----LLEDEGRAY 212

Query: 230 LPIVK--DYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQG 284
              ++  D  V+A+ K  RD  LK     ++IF  + D + G+   +   D++ N     
Sbjct: 213 FKALEDGDKEVEALWKRFRDLSLKEFERIYEIFDVKFDSYAGEAFYNDKMDVVVN----- 267

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAAD 337
                             ++  K LL  S     ++ D+ + P   +LK DG+  Y   D
Sbjct: 268 ------------------ELKEKNLLVESNGAQVVMLDEYNMPPCIVLKGDGASIYATRD 309

Query: 338 LA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---------------------- 372
           LA   Y K KY+  F   IYV+G+  + + K++  V                        
Sbjct: 310 LAAAMYRKKKYD--FYKSIYVVGTPQALHFKQVFKVLELAGHEWAKDCVHVGFGLVKFAD 367

Query: 373 -AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             +S +K ++ +LL +L++   D     ++++  +      V  ++G  +V F  L    
Sbjct: 368 RKLSTRKGEV-ILLDDLIKESIDKTLEVINEKNPNLDNKEEVAKKIGVGAVVFTYLKNSR 426

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            + + FD+ ++     E    YVQY+YAR  SI  +A  +  + D+              
Sbjct: 427 EKDIVFDWKEMLSFDGETGP-YVQYSYARANSILTRAGGLKGNADYSKLSSK-------- 477

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
              E +L+  L  + + I  AT   EP  +  Y  ++A  F+  ++          +   
Sbjct: 478 --EEFELVKALEGFAKQIHLATEKLEPSIVTRYAIEVAKSFNKFYNAH------SVLNLE 529

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +L   RL LV A   +I + L ++G+E  ++M
Sbjct: 530 DEELKEARLSLVKATCQVIKNSLALLGIEVVDKM 563


>gi|147673730|ref|YP_001217600.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|146315613|gb|ABQ20152.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227013971|gb|ACP10181.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 599

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 235/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  +N++        ++ + N    MHVGH R  ++G
Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKNIVA-------DYSAPNVAKEMHVGHLRSTIIG 161

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 417 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 526 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 580 TAKTIKQGLALLGIDTLERM 599


>gi|228933503|ref|ZP_04096356.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826232|gb|EEM72012.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 562

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 136/621 (21%), Positives = 256/621 (41%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             +I NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALIVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G++   +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGYN---WVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    +     + ++  +      V  +VG+ +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A    EP  ++ Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+
Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++G+E+P EM
Sbjct: 542 AVTVVLKEGLRLLGMEAPEEM 562


>gi|291294729|ref|YP_003506127.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290469688|gb|ADD27107.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 613

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 147/624 (23%), Positives = 255/624 (40%), Gaps = 112/624 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V E P D   G   T  AM L+R L   P  IA  ++  I++   V   F+ G G++N 
Sbjct: 32  VVQETPPD-KEGDYGTPVAMSLARTLRKAPPQIAADLLQNIQLPAWVRRTFVLG-GYLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P++L K  +  V               KV +E  S NP   +HVGH R   +GD+LA
Sbjct: 90  ELDPAFLVKSATLPVAP-------FPKVAGKVLLEHTSVNPNKELHVGHLRNICLGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQ-INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            ++ F G +V    YI+D G Q   +L    ++  ++A      D    ++ G     + 
Sbjct: 143 RILRFVGRDVEVMNYIDDTGRQAAESLYALQYFGLKEAPAQTKYD----HWVGEAYVRLH 198

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQ-AMMKIIRDDLKA---LNIQHDIFISEDDFH 266
           + + D      +    +  L  ++   ++ A+ KI+R  L+    L  +++  + E D  
Sbjct: 199 QAMEDPEQKARIEQGVQSTLHRLEAGELRDAVDKILRAQLQTMYRLGAEYNALVWESDI- 257

Query: 267 RGDPSPIRDIIDNLARQGYVYEG---ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                 +R+ +  L +   + EG   +  P + K      MD    +         ++ P
Sbjct: 258 ------VREGL--LGKAMKILEGSPYVSRPTEGKYAGALVMDTSAFI-------PGLEDP 302

Query: 324 ---LLKSDGSYTYFAADLA--YFKCKYERGFDNMIY-VMGSDHSGYVKRLEAVAAAVSEK 377
              L++S+G+ TY A D+A  ++K     G   + Y    S    Y    E V       
Sbjct: 303 YLVLIRSNGTSTYTAKDIALQFWKMGLLEGLRFVTYDTQPSGAPLYSTHPEGVPLPFGGA 362

Query: 378 KAQINVLLCELVRLYR--------DGMP------------------IKMSKRAGDFITLR 411
              INV+        R        +G P                   +MS R G  +++ 
Sbjct: 363 SETINVVDARQSHALRVVQASLEVEGRPDLAEKCFHLAYETVLLEGRQMSGRKGIVVSVD 422

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-Q 445
            V+DE                         +G  +VRF ML  +  + +DF + +    +
Sbjct: 423 EVMDEAVKRVRAVIAEKNPDHPSPAEAAEQIGVGAVRFAMLKTEAKKQIDFRYDQALSFE 482

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHL 502
               P  Y+QYAYAR  SI R+A++           + VI +  +F  +   E+ L   L
Sbjct: 483 GDTGP--YIQYAYARAGSILRKAEE-----------QGVIQEAPDFTQATPYEVALAKTL 529

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR-LRFVQANNRKLTMMRLQ 561
             +P  +++A   + P+ +A YL +LA+ +   ++    + R    V +   +L  +RL+
Sbjct: 530 LRFPEAVQDAARNKAPHIVAQYLLELAAAWSSFYNAKTPDGRPATPVLSAPPELRGVRLE 589

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV A+   +  GL ++G+E+P  M
Sbjct: 590 LVKALRQTLKQGLGLLGLEAPEVM 613


>gi|13431882|sp|P57851|SYR_PASMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|12720817|gb|AAK02635.1| ArgS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 563

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 140/600 (23%), Positives = 245/600 (40%), Gaps = 116/600 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG +P   A+ ++ ++ +    + + IAG GFINL+L  ++L + +
Sbjct: 23  GDYQANGIMAAAKKLGRNPREFAQQVIEQLDLSEIAEKIEIAGPGFINLFLDKNWLAEQI 82

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S + V+  + G       T V  ++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 83  S-LAVNDDKLGIQATETQTVV-ADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 140

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216
           R  ++ D G Q   L       Y + + N        SDL E +Y         +   + 
Sbjct: 141 RANHVGDWGTQFGMLIA-----YLEKVENESASEMELSDL-EAFY---------RAAKEH 185

Query: 217 YSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHR 267
           Y S+ + F E+    +VK    D   + M K + D     N QH     ++ ++E D   
Sbjct: 186 YDSDPV-FAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQN-QHNYDRLNVTLTEKDVM- 242

Query: 268 GDP--SP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           G+   +P + DI+ +L +QG   E        L   K+K                   G+
Sbjct: 243 GESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKE------------------GE 284

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            +   + K DG + Y   D+A  K +YE    D  +    +  S ++++    A  ++ K
Sbjct: 285 PMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRK 340

Query: 378 KAQI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
              + +    E     + L +DG P K   R G  + L  ++DE                
Sbjct: 341 AGYVPDSFQLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAVERATQLIQEKSTAL 398

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF
Sbjct: 399 SAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIF 457

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +++    + D    P  V+  E      E  L + L ++   I+       P+ L  YL
Sbjct: 458 NRSE--LNEQDLSESPV-VLSNE-----KERLLAIKLLQFEEAIQIVAKEGTPHVLCTYL 509

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA VF   + H         +   + ++   RL+L       +  GL+++G+++ ++M
Sbjct: 510 YELAGVFSSFYEH------CPILNNEDEQIKRSRLKLALLTEKTLKQGLDLLGIKTVDKM 563


>gi|170756017|ref|YP_001780705.1| arginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229558755|sp|B1IIE6|SYR_CLOBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169121229|gb|ACA45065.1| arginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 563

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEDGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|187918455|ref|YP_001884018.1| arginyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689294|sp|B2S0U2|SYR_BORHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119861303|gb|AAX17098.1| arginyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 584

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 257/595 (43%), Gaps = 96/595 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FIN 90
           I++++P     G LS       S+ L L+   I E I+ +I      D       G ++N
Sbjct: 33  IIMQKPPKSELGDLSI-LIFEFSKILKLNTSIITEEIIKQIG-----DKYATKAMGPYLN 86

Query: 91  LYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +  +   Y++  +  +     +YG N + K  ++ IEF S N   P+H+GH R  ++G++
Sbjct: 87  IKFNRKEYIKDTIKKVNEQKEKYGINNVLKNKRIIIEFSSPNTNKPLHIGHLRNDIIGES 146

Query: 150 LASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYYP-G 203
           L+ ++  SG +VT+   IND G  I  + LA   F      + +L   D  + + Y    
Sbjct: 147 LSRILKASGAQVTKINLINDRGTHICKSMLAYKKFGNNTTPELSLKKGDHLIGDFYVKYN 206

Query: 204 VYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-IF 259
            Y K+   E+A+    +LL   E   EK + + K  + Q  ++ I+   K  NI  D I+
Sbjct: 207 EYAKN--NEMAEDEIQQLLCKWEEGDEKTVQLWKKLN-QWAIEGIKATYKLTNITFDKIY 263

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEG-----ILPPPKSKTTQKCDMDRKQLLFRST 314
           +  + F  G     R+II     +G  Y+       +  P    T+K ++  +Q  F+  
Sbjct: 264 LESEIFKIG-----REIILKGLEEGLCYKREDGAICIDIP----TEKNEISEQQ--FKQ- 311

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
                  + LL+++G+  Y   DL      K E  FD MIYV+GS+   + K L  VA  
Sbjct: 312 -------KVLLRANGTSIYLTQDLGNIVTRKNEFDFDEMIYVVGSEQIHHFKTLFYVANK 364

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +   K    V L   +    +G   KM  R G+ I   +++ ++ S+S+  + + ++NS+
Sbjct: 365 LGITKENNLVHLSYGMVNLPEG---KMKSREGNVIDADNLIHDL-SESI-ILEIKKRNSD 419

Query: 434 LLDF-----------------------DFCKVKEQS---KENPVFYVQYAYARCRSIFRQ 467
             D+                       D    KE+S     N   Y+QY  AR  SI  +
Sbjct: 420 KKDYQEIALNISLGAIHYYLLKTAIHKDILFNKEESLSFTGNSGPYIQYVGARINSILEK 479

Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             ++      ++FDL            + +E ++I  ++E+   I  A+  + P  +A Y
Sbjct: 480 YDELNLSNETINFDLL----------VNENEWEIIKIISEFEEHIIKASKDRNPSVIANY 529

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++         + +  N  +LT  R+ L  AV   I + ++++ +
Sbjct: 530 SYLLAKSFSTYYQDT------KIIDKNKPELTHARIDLSKAVLQTIKNCMHLLNI 578


>gi|318040673|ref|ZP_07972629.1| arginyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 597

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 218/545 (40%), Gaps = 89/545 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PLG  P  IA  +V ++K  P    +     IAG GFINL L P  L
Sbjct: 43  GDFQANGALPLAKPLGQPPRAIATAVVEQLKAYPSFAELCLEPQIAGPGFINLTLRPERL 102

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + +  +     G   +  G+ V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 103 AAEVQA-CLQDQRLGVPAVQGGSPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 161

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217
           + V R  ++ D G Q   L   +     +AL   D+ DL               +L   Y
Sbjct: 162 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDL--------------GDLVAFY 207

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F +++         V  +       LKA  +  D   S  +F +     I D +
Sbjct: 208 REAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 260

Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKS 327
           D  L+ +G  +     EG++   ++      D D  + +F   + G D  +PL     KS
Sbjct: 261 DIRLSERGESFYNPYLEGVVADLEATGLLVVD-DGARCVFLEGVSGKD-GKPLPVIVQKS 318

Query: 328 DGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380
           DG + Y   DLA  + ++    D      +IYV  +  + +   +  VA  A    +  +
Sbjct: 319 DGGFNYATTDLAAIRYRFGAAPDGDGARRVIYVTDAGQANHFAGVFQVARRAGWVPEDGR 378

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           +  +   LV+   DG   K+  RAGD + LR ++DE                        
Sbjct: 379 LEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLEEEGRQEEEAF 435

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+  
Sbjct: 436 IQQVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARKGG 494

Query: 470 DIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               DL+    P   I Q   F +  E  L+  L ++  VI        P +L  YL++L
Sbjct: 495 ----DLEGSSVP---IDQPLSFHEPQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFEL 547

Query: 529 ASVFH 533
           + VF+
Sbjct: 548 SQVFN 552


>gi|317506285|ref|ZP_07964100.1| arginyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316255422|gb|EFV14677.1| arginyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 589

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 227/599 (37%), Gaps = 98/599 (16%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     N  + L++ L  +P  +A  +VA++   P    V  +G GF+NL  + + 
Sbjct: 38  RPSEHADYQANGLLALAKKLKGNPRELAGKVVAQLDGSPLFAHVEASGPGFVNLTFADTA 97

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   L++   S  + G           +++ + N    MHVGH R  ++GD L  L+ FS
Sbjct: 98  LAGQLAA-RGSDPKLGLGKAASRPVTVVDYSAPNIAKEMHVGHLRSTIIGDALVRLLTFS 156

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----GYYPGVYLK-HVGK 211
           G EV R+ ++ D G Q   L   +      A    D D P        Y     + +  +
Sbjct: 157 GSEVIRQNHVGDWGTQFGMLIEHLLENPDVAGGEEDGDTPTISRLAALYKAARARFNADE 216

Query: 212 ELADKYSSELLNF----PEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           E   +    ++      PE    W  IV +   +     I   L  L    DI   E  +
Sbjct: 217 EFQTRSRQRVVALQSGDPETLAGWQEIVAES--KTYFGEIYSKLGVLLTDEDI-AGESSY 273

Query: 266 HRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +      ++ I D+L R+G     EG L          C      + F   +  D    P
Sbjct: 274 N----DELQGIADDLERRGVAVRSEGAL----------C------VFFDDVVDKDGKPVP 313

Query: 324 LL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK-------RLEAVAAA 373
            +  KSDG + Y A DLA  + +  +     ++YV+GS  + + K       R   +   
Sbjct: 314 FIIQKSDGGFGYPATDLATLRHRVRDLKAARLLYVVGSPQALHFKMVFETARRAGYLPEG 373

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------ 415
           V  +  Q   +L        DG P K   R G+ I L  ++D                  
Sbjct: 374 VEAEHVQFGSVLGA------DGKPFK--SREGETIRLISLLDEAVARARATIAERSPGLS 425

Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                    EVG  +V++  L    +    FD  ++    + N   Y+QYA+AR RS+  
Sbjct: 426 AQAQEQRAQEVGIGAVKYADLSTSRTRDYVFDLDRMLSL-QGNTGVYLQYAHARIRSMLA 484

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +  +     D    P          + +E  L+  L E+   ++    + EP++L  YLY
Sbjct: 485 RLAEAEAAPDGSEAP--------PLEPAERALVRTLDEFGATLDAVAESLEPHRLCAYLY 536

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  F   +           ++A   ++   R+ +       +  GL+++G+ +P  +
Sbjct: 537 ALAQAFSDFYEA------CPVLKAPTAQIRARRVAICELTGDTLALGLSLLGIAAPERL 589


>gi|213402307|ref|XP_002171926.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           [Schizosaccharomyces japonicus yFS275]
 gi|211999973|gb|EEB05633.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           [Schizosaccharomyces japonicus yFS275]
          Length = 618

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 228/550 (41%), Gaps = 89/550 (16%)

Query: 86  KGFINLYLSPSYLR-----KILSSIVVSGI-----EYGRNLIGKGTKVNIEFVSANPTGP 135
           KG++N   +  +LR       L+ +V+  I     EYGRN  G G    IEF S N   P
Sbjct: 96  KGYVNCEANGIFLRFNFDGSKLTELVLPMIWSKQSEYGRNNSGNGKVAVIEFSSPNIAKP 155

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
            H GH R  ++G  LA+L    G++V R  Y+ D G Q   LA+         L+ ++  
Sbjct: 156 FHAGHLRSTIIGSFLANLHESQGWKVYRINYLGDWGKQFGLLAVGF------ELHGDEEQ 209

Query: 196 L---PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPI-VKDYSVQAMMKIIR 246
           L   P  +   VY+K        +E  D   +E     +    P+ + D + Q   ++  
Sbjct: 210 LSKDPIRHLYQVYVKINADATAEQEKIDAEKAEAEAAGKPYETPVTLHDKARQFFKRMEE 269

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---------KSK 297
            D +AL +          F     + +++  + L  +   Y+G    P         K K
Sbjct: 270 GDEEALKVW-------GRFRELSITKLQETYERLNIKYDQYDGESQVPLDLMNEALEKLK 322

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
           T    + D+  LL   +     + + ++ KSDG+  Y   D+     +Y +  FD  IYV
Sbjct: 323 TLGLIEEDKGALLVDLSKHDKKLGKAIVQKSDGATLYLTRDIGTAIRRYNKYHFDKSIYV 382

Query: 356 MGSDHSGYVKRL----EAVAAAVSEKKAQIN--------------VLLCELVRLYRDGMP 397
           + S    Y  +L    E +    ++K   IN              V L +++ + ++ M 
Sbjct: 383 VASQQDLYFAQLFKIFELMGFEWAKKCVHINYGLVQGMSTRKGKAVFLDDIMEVAKEEMH 442

Query: 398 IKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFY 453
             M K    +  +++   V D VG  +VR      K      FD+ ++   +    P  Y
Sbjct: 443 KVMKKNEEKYAQIKNPEEVADIVGKTAVRIQDSTGKRVNNYVFDWSRMLSFEGDTGP--Y 500

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYA++R  S+ R+    F D        +++ ++  FD     L+  L++YP V++++ 
Sbjct: 501 LQYAHSRLCSVRRKVN--FTDEQIANADLSLLKEQDAFD-----LVRLLSQYPDVLKSSF 553

Query: 514 IAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             QE   +  YL+ L    + ++   W  GRE P           L + RL L  A   +
Sbjct: 554 RFQETSTVVTYLFKLTHMVSKLYDILWVQGREEP-----------LQLARLNLFGAARLV 602

Query: 570 INSGLNIIGV 579
           + +G+ ++G+
Sbjct: 603 LYNGMTLLGL 612


>gi|329942490|ref|ZP_08291300.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287127|ref|YP_004422028.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847723|emb|CBY16713.1| putative arginyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506631|gb|ADZ18269.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815400|gb|EGF85388.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914367|gb|AEB55200.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 562

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 229/589 (38%), Gaps = 110/589 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L+R L + P  IAE IV  I  +    S+ IAG GFIN   S  +L   L
Sbjct: 38  GHYQCNDAMKLARTLKMPPRAIAESIVNHISKN-SFSSIEIAGAGFINFTFSKEFLNLSL 96

Query: 103 SSIVVSGIEYGRNL-----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            S       Y ++L     +    KV I+F S N    MHVGH R  ++GD LA +  F 
Sbjct: 97  QS-------YSQDLSSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFV 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G +V R  +I D G      A  +   Y Q   + D +  E             +L   Y
Sbjct: 150 GNDVLRLNHIGDWGT-----AFGMLITYLQEESSEDIENLE-------------DLTILY 191

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI 276
                 F E+      K  S   ++ +   D KA  +   I  ISE  F +     I +I
Sbjct: 192 KKAHARFAEDAEF---KKRSQTNVVALQSGDPKARKLWERICEISERAFQK-----IYNI 243

Query: 277 ID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDG 329
           +D ++ ++G  +     P   K     D+++K L+  S     +  +    PL+  KSDG
Sbjct: 244 LDISIEKRGESFYNPFLPEIIK-----DLEKKNLITISDNAKCVFHEGFSIPLMVQKSDG 298

Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            Y Y   DLA  + + E    D +I V     S + + LEA A A      +  V     
Sbjct: 299 GYNYATTDLAAMRYRVEHDHADKIIIVTDMGQSLHFQLLEATALAAGYLPNK-EVFSHVG 357

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421
             L  D    K   R+G+ I L+ ++D                            +G ++
Sbjct: 358 FGLVLDSEGKKFKTRSGENIKLQELLDMAIDQAVATLKKHRPEMSEAEIAERAPVLGINA 417

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L         F F K+  + + N   ++ Y Y R + I R+              
Sbjct: 418 IKYADLSSHRVSDYVFSFEKML-RFEGNTAMFILYGYVRIQGIKRR------------LG 464

Query: 482 RNVIPQESEFDT---SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-- 536
              +  ES  D    SE  L + L  +P  I+       P+ L  YLY L + FH  +  
Sbjct: 465 IEKLSLESTADIQEPSEEALALALLRFPEAIDLTLKELCPHFLTDYLYMLTNKFHAFFRD 524

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            H   +P  +            RL L   V   + +G++++G+++ + +
Sbjct: 525 CHIEGSPHQK-----------ARLYLCALVEKTLATGMHLLGLQTLDRL 562


>gi|299471588|emb|CBN79450.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 616

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 217/544 (39%), Gaps = 89/544 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRK 100
           G    NAAM L++PL   P  +A  +  ++  ++    ++  IAG GFINL L   ++  
Sbjct: 63  GDYQCNAAMALAKPLKCKPRDVASSLAEKLGPRLSAICEAPEIAGPGFINLRLRDGFVAA 122

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + S+V  G   G   +    +V ++F S N    MHVGH R  ++GDT+  ++ F G++
Sbjct: 123 KVKSMVGDGERLGVPRVTNPERVVVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHD 182

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R  ++ D G Q   L           + +     PE    G   K    +L   Y   
Sbjct: 183 VVRLNHVGDWGTQFGML-----------ISHLKEVAPEAIEDGAEDKFNVGDLVTFYKEA 231

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--------HDIF--ISEDDFHRGDP 270
              F E+     +    V  +     +  +A  +          DI+  +  +   RG+ 
Sbjct: 232 KARFDEDDGFKEIARAEVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGES 291

Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLL- 325
                + D++ +L  +G + E                D  ++++       D   +PLL 
Sbjct: 292 FYNVMLPDVVSDLESEGLLEES---------------DGAKVVYLEGFESRDGTSQPLLV 336

Query: 326 -KSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380
            KSDG + Y   DLA  + +   ER  D ++YV+      +  ++  VA  A  + +  Q
Sbjct: 337 KKSDGGFMYSTTDLAAIRHRVTTERA-DRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQ 395

Query: 381 --------------------------INVLLCELVRLYRDGMPIKMSKRAG-----DFIT 409
                                     ++ LL E VR+  + +  +  +  G     D + 
Sbjct: 396 LQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQADEVE 455

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           L  V   VG  +V++  L         F + K+    + N   Y+ YA+AR + I ++A 
Sbjct: 456 LERVSKVVGIGAVKYADLSMNRESNYRFSYAKML-SLQGNTAPYMLYAFARVQGIKKKAT 514

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +   DL          P+E+      L+L       P V+E+  +   P++L  Y+++L+
Sbjct: 515 EGLGDLSGTEISMGT-PEEAALARMLLRL-------PEVLEDLEVDLFPHRLCDYMFELS 566

Query: 530 SVFH 533
           S F+
Sbjct: 567 SQFN 570


>gi|47208421|emb|CAF89939.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 696

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 138/610 (22%), Positives = 245/610 (40%), Gaps = 108/610 (17%)

Query: 49  AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108
           A M+ ++ + ++P  IAE I   +  +  +    IAG GFIN++L  S++ K+LS ++++
Sbjct: 122 AQMLKAKGVKVNPREIAERITRNLPDNELIQKTEIAGPGFINIHLKRSFVSKLLSKLLIN 181

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G++     +    +V ++F S N    MHVGH R  ++GD+++ L  F G++V R  ++ 
Sbjct: 182 GVKPPP--LASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVG 239

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L   +  ++   L    +  P G     Y     KE   ++  +   F +  
Sbjct: 240 DWGTQFGMLIAHLQDKFPDYL---TASPPIGDLQAFY-----KESKKRFDED-EAFKKRA 290

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY 287
           +  +VK  S +       D +KA N+  D  +S  +F +     I D +D  +  +G  Y
Sbjct: 291 YQCVVKLQSKEP------DFIKAWNLICD--VSRQEFQK-----IYDCLDIKIIERGESY 337

Query: 288 -----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                  ++   + +   + D  RK ++F     G  +   ++KSDG YTY  +DLA  +
Sbjct: 338 YQDLMTDVVKEAEDRGFVQLDEGRK-IIFAP---GQSLPLTVVKSDGGYTYDTSDLAALR 393

Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQINVLLCELVRLYR 393
            + +E   D +IYV  S    + + + A A  +          + A   V+L E  RL R
Sbjct: 394 QRLFEEKADTIIYVTDSGQGSHFQVVFAAAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQR 453

Query: 394 DGMPI----------------------------KMSKRAGDFITLRHVVDE--------- 416
               I                            K   R+G+ + L  ++DE         
Sbjct: 454 SRNRIRHRYPAPTSVLGLRAADVSSALPNLPRKKFKTRSGETVRLMDLLDEGLKRSMDKL 513

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               V    +++  L         F F K+ +  + N   Y+ Y
Sbjct: 514 KEKERDQVLTADELVKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLY 572

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIA 515
           A+ R RSI R A     ++D     +     E   +   E +L   +  +P ++      
Sbjct: 573 AFTRIRSIARLA-----NIDEATLRKEAASTEILLEHEKEWKLGKCILRFPEILVKILDD 627

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
              + L  YLY+LA+ F   +       + R       K+ M R+ L  A A+I+    +
Sbjct: 628 LLLHSLCDYLYELATTFTEFYDSCYCVEKDRQT-GEVVKVNMWRMLLCDATAAIMAQCFH 686

Query: 576 IIGVESPNEM 585
           I+G+     M
Sbjct: 687 ILGLNPVERM 696


>gi|291300762|ref|YP_003512040.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569982|gb|ADD42947.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 570

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 137/612 (22%), Positives = 236/612 (38%), Gaps = 125/612 (20%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H    TN  + L++  G  P  +A  +V ++     +  V +A  GF+N+ ++ + 
Sbjct: 20  RRSDHADFQTNGILPLAKQAGQQPRDLAVAVVDQLDHGDLLSEVTVASPGFVNITVTDAA 79

Query: 98  L-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           + R++   +  S +  G+   G  T V  ++ + N    MHVGH R  V+GD LA L+  
Sbjct: 80  VWRQVEQRLADSLLGLGQPEAGSTTVV--DYSAPNVAKQMHVGHLRSTVIGDALARLLEA 137

Query: 157 SGYEVTREYYINDAGAQINTL-----------------------ALSVFWRYQQALYNND 193
            G  V R+ ++ D G Q   L                        L   +R  +A+++ D
Sbjct: 138 LGATVIRQNHLGDWGTQFGMLIQYLDEHPDLDWHRRGDHSPGIDTLDALYRAARAVFDTD 197

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK-IIRDDLKAL 252
           +D                  AD+    ++            D +  A+ + ++R  ++A 
Sbjct: 198 TD-----------------FADRSRKRVVALQS-------GDAATVAVWRDLVRTSMEAF 233

Query: 253 N-IQHDIFISEDDFHRGDPSP----IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           N I   + +S  D H    S     + D++  L   G   E                D  
Sbjct: 234 NAIYRRLGVSLTDEHLAGESSYNPLLADVVSALVEAGIAVES---------------DGA 278

Query: 308 QLLFRSTMVGDDVDR-PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
             +F     G +    PL+  K DG + Y A DLA  + + +  G D ++Y++ +  S +
Sbjct: 279 LCVFDDRFTGHEGQPIPLIVRKRDGGFGYAATDLATIRHRAQDLGADRVLYLVDARQSLH 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            +++ A A         + V        L  DG P K   R+G  + L  ++D    D  
Sbjct: 339 FRQVFAAARRAGWLGDDVEVRHVPFGTVLGADGKPFK--TRSGGTVALTSLLD-AAVDGA 395

Query: 423 RFMMLWRKNSEL---------------------------LDFDFCKVKEQS-KENPVFYV 454
           R  ++  KN EL                            D+ F   K  +   N   Y+
Sbjct: 396 R-AVVADKNPELPAAELDAIAEAAGIGAVKYADLSTARGTDYRFNVDKMVALNGNTGVYL 454

Query: 455 QYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           QYA+ R  SI R++       +  DL P            +E  L +HL +Y RV+ +  
Sbjct: 455 QYAHTRIASILRKSPTGTHAAVHVDLPPH----------PAERVLALHLDDYSRVLADTV 504

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP+++A YL++LA +F   +    EN     + A +  +   RL L       ++ G
Sbjct: 505 EQLEPHRVATYLFELAKLFSAFY----EN--CPVLSAADSAVRGNRLALTELARRTLSHG 558

Query: 574 LNIIGVESPNEM 585
           L I+G+ +   M
Sbjct: 559 LCILGITALERM 570


>gi|331220739|ref|XP_003323045.1| arginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309302035|gb|EFP78626.1| arginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 626

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 234/595 (39%), Gaps = 117/595 (19%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKIL------SSIVV 107
           R  G DP  +A+ I    + +  + S    G  F+   + S +  R +L      + +  
Sbjct: 85  RIKGSDPKQLAKKIQDEFQTNEWIQSANAEG-AFVKFQMDSKTLCRTVLHQVNELTHLSN 143

Query: 108 SGIEYGRNL------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +G  YG N        GK  K+ +EF S N     H GH R  ++G  L +L   +G++V
Sbjct: 144 TGGGYGTNSSGIDPSTGKKKKLVLEFSSPNIAKKFHAGHLRSTIIGAFLGNLHEANGWDV 203

Query: 162 TREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK------HVGKEL 213
            R  Y+ D G Q   LA+  F RY  +Q L    S+ P  +   VY K         KE 
Sbjct: 204 KRINYLGDWGRQFGVLAVG-FERYGSEQEL----SEQPIQHLLDVYTKINKDMEGEEKEA 258

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDF 265
            ++ + +     EE       D +  A+ K  RD        D   LNI+ D++  E   
Sbjct: 259 LEQKARDFFKLMEE------GDSTAVALWKRFRDYSIKQYEQDYARLNIKFDVYSGESQV 312

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                  +   +  L  +G   E        K T  CD+D  +L       G  V R   
Sbjct: 313 TH---ESMDVALKVLREKGIAIE-------DKGTLICDLDAYKL-------GRTVIR--- 352

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS---------------GYVKRLE- 368
           KSDG+  Y   D+     +Y++  FD MIYV+ S                   + K+L+ 
Sbjct: 353 KSDGTNLYITRDIGEAIQRYDKYQFDKMIYVVASQQDLHLAQFFKVLDLMGFPWAKKLQH 412

Query: 369 ---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSV 422
               + A +S +K   +V L +++   R+ M  +M      +  +       DEVG   +
Sbjct: 413 INFGMVAGMSTRKG-TSVHLEDMMNEARNTMHEQMKTNVDKYNEIPDPLRTADEVGISGI 471

Query: 423 RFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +   +  K     +F + +V   +    P  Y+QYA+ R  S+ R+A            P
Sbjct: 472 KIQDMAGKRINGYEFKWDRVLSFEGDTGP--YLQYAHVRLCSVERKAA-----------P 518

Query: 482 RNVIPQ----ESEFDTSEL-------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
             V+P+     +E +TS L       +L+V L+ YP  ++ A    EP  +  Y + L  
Sbjct: 519 TYVLPEPTKIAAEIETSILSEEAKARELVVLLSLYPDAVKTAFSKLEPSSIVTYCWRLTH 578

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                W           V+  ++   + RL L  +   ++ S + ++ +E  + M
Sbjct: 579 AVSSAW-------ETLIVKGQDQPTALARLWLFRSCKDVLASAMKLLTLEPLDRM 626


>gi|229524081|ref|ZP_04413486.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229337662|gb|EEO02679.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 599

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 235/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE  ++     ++  KN EL           +     K  + SK               
Sbjct: 417 LDE--AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 526 DEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 580 TAKTIKQGLALLGIDTLERM 599


>gi|161723314|ref|NP_245488.2| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
          Length = 577

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 140/600 (23%), Positives = 245/600 (40%), Gaps = 116/600 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG +P   A+ ++ ++ +    + + IAG GFINL+L  ++L + +
Sbjct: 37  GDYQANGIMAAAKKLGRNPREFAQQVIEQLDLSEIAEKIEIAGPGFINLFLDKNWLAEQI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S + V+  + G       T V  ++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 97  S-LAVNDDKLGIQATETQTVV-ADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216
           R  ++ D G Q   L       Y + + N        SDL E +Y         +   + 
Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKVENESASEMELSDL-EAFY---------RAAKEH 199

Query: 217 YSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHR 267
           Y S+ + F E+    +VK    D   + M K + D     N QH     ++ ++E D   
Sbjct: 200 YDSDPV-FAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQN-QHNYDRLNVTLTEKDVM- 256

Query: 268 GDP--SP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           G+   +P + DI+ +L +QG   E        L   K+K                   G+
Sbjct: 257 GESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKE------------------GE 298

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            +   + K DG + Y   D+A  K +YE    D  +    +  S ++++    A  ++ K
Sbjct: 299 PMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRK 354

Query: 378 KAQI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
              + +    E     + L +DG P K   R G  + L  ++DE                
Sbjct: 355 AGYVPDSFQLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAVERATQLIQEKSTAL 412

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF
Sbjct: 413 SAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIF 471

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +++    + D    P  V+  E      E  L + L ++   I+       P+ L  YL
Sbjct: 472 NRSE--LNEQDLSESPV-VLSNE-----KERLLAIKLLQFEEAIQIVAKEGTPHVLCTYL 523

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA VF   + H         +   + ++   RL+L       +  GL+++G+++ ++M
Sbjct: 524 YELAGVFSSFYEH------CPILNNEDEQIKRSRLKLALLTEKTLKQGLDLLGIKTVDKM 577


>gi|148243340|ref|YP_001228497.1| arginyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166228634|sp|A5GW85|SYR_SYNR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147851650|emb|CAK29144.1| Arginyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 590

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 141/602 (23%), Positives = 240/602 (39%), Gaps = 110/602 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ +P+  ++     IAG GFIN+ L PS L
Sbjct: 40  GDFQANGALALAKPLKQAPRQIAAAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVL 99

Query: 99  RKILSSIV------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              +   +      V+ +E           V ++F S N    MHVGH R  ++GD LA 
Sbjct: 100 AAEVRQRIGDPRLGVAAVEQAE------APVIVDFSSPNIAKEMHVGHLRSTIIGDCLAR 153

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGK 211
           ++ F G++V R  ++ D G Q   L   +     +AL   D+ DL +      + +   K
Sbjct: 154 VLEFRGHQVLRLNHVGDWGTQFGMLITHLKQVAPEALNTADAIDLGDLV---AFYREAKK 210

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRG 268
              D  + +  +  E   L      S++A   +    R + + +  + DI ++E      
Sbjct: 211 RFDDDEAFQTTSREEVVKLQGGDATSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFY 270

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL---- 324
           +P  +  ++D+L   G +         +     C       +F   +VG +  +PL    
Sbjct: 271 NPQ-LAAVVDDLRSSGLLV--------TDEGAGC-------VFLEGVVGKE-GKPLPLIV 313

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGY-------VKRLEAVAAAV 374
            KSDG + Y   DLA  + +     D    +IYV  +  + +        KR   V AA 
Sbjct: 314 QKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTDAGQAAHFAGVFQVAKRAGWVPAAA 373

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
           S +     ++  +      DG   K+  RAGD + L+ ++DE                  
Sbjct: 374 SLEHVPFGLVQGD------DGK--KLKTRAGDTVRLKDLLDEAVERAQADLRRRLEEEER 425

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        VG  +V++  L         F F ++   +  N   Y+ YA  R   
Sbjct: 426 QESESFIDQVATTVGLAAVKYADLSTNRITNYQFSFERMLALTG-NTAPYLLYAVVRISG 484

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+       LD +L P  ++ +E +    E  LI  L +   VI        P +L  
Sbjct: 485 IARKGG----ALDGEL-PERLVFEEPQ----EWALIRQLLQLDAVISEVESDLLPNRLCT 535

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L+  F+  +    + P L+     +  +   RL L    A  +  GL+++G+ S  
Sbjct: 536 YLFELSQSFNRFYD---QVPVLK----ADEPMRSSRLALCRLAADTLKLGLSLLGIPSLE 588

Query: 584 EM 585
            M
Sbjct: 589 RM 590


>gi|325571092|ref|ZP_08146664.1| arginine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156177|gb|EGC68363.1| arginine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 563

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 248/596 (41%), Gaps = 102/596 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I      + + + G  ++N +
Sbjct: 27  LLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-QASFEKIEVVGP-YLNFF 83

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +   +L  ++     +G   IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MDKKAISAHVLELVLKEKNHFGDQTIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209
            ++   GY+  R  ++ D G Q   L ++   W  ++A+     ++L   Y         
Sbjct: 144 FILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAEPINELLRLYVDFHEAAET 203

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFH 266
            K+L D   +         W   ++D   +AM   +  RD+ LK  N  +D+   E  F 
Sbjct: 204 DKQLEDDARA---------WFKKLEDGDQEAMDLWQWFRDESLKEFNKIYDML--EVSF- 251

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321
                      D+L  + +           K T+  ++  ++ L +     + VD     
Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLKEDQGAEIVDLAAYD 292

Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370
             P L  KSDG+  Y   D+A   Y K  Y   F   +YV+G++ S + K+L+AV     
Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350

Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                                +S +K +I VLL E++    D    +++++         
Sbjct: 351 FEWADDMTHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIDSAKEQITEKNPTLENKEE 409

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           V  +VG  +V F  L  KN  L +FDF     V+ + +  P  YVQY++AR  SI  +A 
Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKAN 465

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                     F    +   +  D    ++I  +  YP  +  A    EP  +A +   LA
Sbjct: 466 ----------FDPAAVSSLALADAESWEVIKLIQRYPETVMQAAEKYEPSVIAKHAIKLA 515

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+ ++++      ++ +  +  K    RL LV+AV +++   L ++G+ +P++M
Sbjct: 516 QAFNKYYAN------VKILAEDTEKDA--RLALVYAVTTLLKEDLRLLGLHAPDKM 563


>gi|313501065|gb|ADR62431.1| ArgS [Pseudomonas putida BIRD-1]
          Length = 578

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++  +    D+  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPTSADISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   KV I+  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LRH+ + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F ++D       ++ Q +     E  L   LA++  ++ N      P+ L  YLYDLA
Sbjct: 478 KGFDEVD-----GKIVLQAAH----EQDLAARLAQFGEILNNVAEKGTPHVLCSYLYDLA 528

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          ++  RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETPSQQQSRLRLAALTGRTL 563


>gi|104779603|ref|YP_606101.1| arginyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|122985979|sp|Q1IGB8|SYR_PSEE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|95108590|emb|CAK13284.1| arginine tRNA synthetase [Pseudomonas entomophila L48]
          Length = 578

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE I+A +    D+    IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPTSADISKAEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G +  G   KV I+  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADD-HLGVHKAGPVEKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G +V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDDVIRQNHVGDWGTQFGML 174



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR + + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRKIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F ++D      N++ Q +     E  L   LA++  ++ N      P+ L  YLYDLA
Sbjct: 478 KGFDEVD-----GNIVLQAAH----EQDLAARLAQFGEILNNVADKGTPHVLCSYLYDLA 528

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          ++  RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETAEQQQSRLRLAALTGRTL 563


>gi|262191347|ref|ZP_06049538.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032766|gb|EEY51313.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 592

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 42  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 101

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 573 TAKTIKQGLALLGIDTLERM 592


>gi|125777988|ref|XP_001359796.1| GA10066 [Drosophila pseudoobscura pseudoobscura]
 gi|54639546|gb|EAL28948.1| GA10066 [Drosophila pseudoobscura pseudoobscura]
          Length = 572

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 202/508 (39%), Gaps = 95/508 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V 
Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------E 227
               Q    +D D+       +Y  +V    A + + E+                    +
Sbjct: 174 ----QLTNVSDKDMQRAPIETLYRSYVAANKAAEENPEIAQRARDLFTALEAGTDDAMAQ 229

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W    + Y+++ +  +       L +  D +  E  + +     I ++++ L   G + 
Sbjct: 230 QWQQ-YRQYTIEELSGVY----NRLGVHFDSYEWESQYSQ---QQISEVLEKLRSAGLL- 280

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                             ++++  R  +V DD   P++KSDGS  Y A D+A    ++ R
Sbjct: 281 ------------------QREVDGREIVVVDDRRIPVIKSDGSTLYLARDIAALLERHSR 322

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             F  ++YV+ +  + +   L    AA+ ++      L  E ++  + G    MS R G 
Sbjct: 323 LQFSRILYVVDNGQADHFNALFKTTAALDKR------LSLEQLKHVKFGRIHGMSTRQGK 376

Query: 407 FITLRHVVDEVGSDSVRFMMLW----RKNSELLDFDFCKV-----------KEQSKENPV 451
            I LR V+DE   D +R   +     R NS L D D C +           K++ + +  
Sbjct: 377 AIFLRDVLDE-ARDVMREKRIQTQTTRSNSSLDDEDVCDILGVSAVLVNVLKQRRQRDHE 435

Query: 452 FYVQYA------------YARCR--SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           F  Q+A            Y  CR  S+    KDI  DL+ D+ P       S+     L 
Sbjct: 436 FSWQHALQVNGDTGIKLQYTHCRLHSLLENFKDI--DLE-DIRPD--WQHYSQEPVDALD 490

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LA + + I  +    E   L  YL+ L +      +  R   RL   Q +      
Sbjct: 491 LLYELARFDQCIWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQESCPLKQS 544

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L  A    +  G+ ++G+   N+M
Sbjct: 545 QRLLLFQAAKRTLQQGMQLLGLRPLNQM 572


>gi|297579579|ref|ZP_06941507.1| arginyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297537173|gb|EFH76006.1| arginyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 599

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/617 (21%), Positives = 234/617 (37%), Gaps = 130/617 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTL 150
           LS  +L     + +       R  + + +   I  ++ + N    MHVGH R  ++GD +
Sbjct: 109 LSEEFLAAQAEAALADA----RLGVAQESPKTIVADYSAPNVAKEMHVGHLRSTIIGDGV 164

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYN 191
              + F G++V R  +I D G Q   L                    L  F+R  + LY+
Sbjct: 165 VRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYD 224

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDD 248
            D                  E A  Y  +L     F  E W  +V    +Q         
Sbjct: 225 EDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ--------- 261

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMD 305
                       ++ ++ R + S  R+ +   +    +Y  +LP   S    K    + D
Sbjct: 262 ------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDD 305

Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S   
Sbjct: 306 GAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 365

Query: 362 GYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  ++DE
Sbjct: 366 QHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 VGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE----------------- 448
             ++     ++  KN EL           +     K  + SK                  
Sbjct: 420 --AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEG 477

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   
Sbjct: 478 NTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEA 528

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA +F   +           + A    +   RL+L    A 
Sbjct: 529 VQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAK 582

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL ++G+++   M
Sbjct: 583 TIKQGLALLGIDTLERM 599


>gi|229513729|ref|ZP_04403191.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229348910|gb|EEO13867.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 599

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/610 (21%), Positives = 231/610 (37%), Gaps = 136/610 (22%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L    
Sbjct: 59  GDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQA 118

Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            + +     G+  E  + ++        ++ + N    MHVGH R  ++GD +   + F 
Sbjct: 119 EAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 171

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G++V R  +I D G Q   L                    L  F+R  + LY+ D     
Sbjct: 172 GHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFA- 230

Query: 199 GYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                        E A  Y  +L     F  E W  +V    +Q                
Sbjct: 231 -------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ---------------- 261

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR 312
                ++ ++ R + S  R+ +   +    +Y  +LP   S    K    + D  Q++F 
Sbjct: 262 -----NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGAQVVFL 312

Query: 313 STMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
                  G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S    ++ +  
Sbjct: 313 EEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ-- 370

Query: 369 AVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             A  +  K   I  NV L      + L +DG P K   RAG  + L  ++DE    +  
Sbjct: 371 --AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDEAQERAK- 425

Query: 424 FMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQ 455
             ++  KN EL           +     K  + SK                  N   Y+Q
Sbjct: 426 -ALIESKNPELSAEEKTNIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQ 484

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R  S+F +A      +D +    ++   E +    E  LI  L ++   +++    
Sbjct: 485 YAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVARE 535

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ +  YL++LA +F   +           + A    +   RL+L    A  I  GL 
Sbjct: 536 GQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAKTIKQGLA 589

Query: 576 IIGVESPNEM 585
           ++G+++   M
Sbjct: 590 LLGIDTLERM 599


>gi|116072008|ref|ZP_01469276.1| arginyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065631|gb|EAU71389.1| arginyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 590

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 144/602 (23%), Positives = 234/602 (38%), Gaps = 110/602 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV ++  D   +++     IAG GFINL + P  L
Sbjct: 40  GDFQANGALPLAKPLKQPPRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERL 99

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L++ + +    G   +     V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 100 AEELAARLGTD-RLGVPAVDNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 158

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + V R  ++ D G Q   L                           +LK V  E  D   
Sbjct: 159 HSVLRLNHVGDWGTQFGMLI-------------------------THLKQVAPETLDTAD 193

Query: 219 S----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE----DDFHRGDP 270
           +    +L+ F  E       D + QA     RD++  L     + +       D  R + 
Sbjct: 194 AVDLGDLVAFYREAKKRFDDDDAFQATS---RDEVVKLQGGDPVSLKAWGLLCDQSRREF 250

Query: 271 SPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL- 324
             + D +D  L+ +G  +     P   +  +  D+    D  Q +F   + G D + PL 
Sbjct: 251 QKLYDRLDIRLSERGESFYNPYLPAVLEGLKAVDLLVTDDDAQCVFLEGVTGKDGN-PLP 309

Query: 325 ---LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
               K DG + Y   DLA  + ++           +IYV  +  + +   +  VA  A  
Sbjct: 310 VIVQKRDGGFNYATTDLAAIRYRFASSPAGDAAQRVIYVTDAGQANHFAGVFQVAERAGW 369

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
              +A++  +   LV+   DG   K+  RAGD + LR ++DE                  
Sbjct: 370 IPAEARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERSEQDLRSRLQEEER 426

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        VG  +V++  L +       F F ++    + N   Y+ YA  R   
Sbjct: 427 TESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRMLAL-QGNTAPYLLYAVVRIAG 485

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+          DL   N   Q SE    E  L+  L ++ RVI        P +L  
Sbjct: 486 IARKGG--------DLGVSNAALQFSE--PQEWALVRELLKFDRVIVEVEDELLPNRLCS 535

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L+ VF+  +        +  ++A    L   RL L    A  +  GL ++G+ +  
Sbjct: 536 YLFELSQVFNRFYDQ------VPVLKAEPSALA-SRLALCRHTADTLRCGLALLGIPTLE 588

Query: 584 EM 585
            M
Sbjct: 589 RM 590


>gi|56964053|ref|YP_175784.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910296|dbj|BAD64823.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 608

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 227/585 (38%), Gaps = 118/585 (20%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90
           + +E+P    HG  STN AM L+R    +PLTIAE I  +++     V  + +   GFIN
Sbjct: 24  VELEQPAQLIHGDYSTNVAMKLARVARKNPLTIAETIKEKLERQRLPVTGIEVVKPGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++            +  G E     +    K  IE  S NP    H+GH R A +GDTL
Sbjct: 84  FFIE-------WDEALADGDE--PQALSSSGKTVIEHTSINPNKSAHIGHLRNACIGDTL 134

Query: 151 ASLMAFSGYEVTREYYINDAGAQ--------INTLALSVFWRYQQALYNNDSDLPEGYYP 202
           A L+   G  V    Y++D G Q        ++T + S   R+    +N  S L E Y  
Sbjct: 135 ARLLKTCGENVEVHNYVDDLGNQLADTLTALLHTNSDSEATRFGDYCWNVYSRLNEAYDK 194

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           G     +  E+  K            WL  +V D      +    +++    I +D+ + 
Sbjct: 195 GTISTSIRDEVLHKLEE---GNNSTAWLGYVVADKITSEHI----EEMGQFGIDYDLLVW 247

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-- 319
           E           RDI+    ++G+         +S    K D   +   +   M  ++  
Sbjct: 248 E-----------RDIV----QKGFWQTAFQKLKQSDVFVKQDSGPQAGCWVLRMSDNESE 292

Query: 320 ------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY------VMGSDHSG----- 362
                  D+ L++S+G  TY A D+AY   K+    D+  Y      +  +  SG     
Sbjct: 293 EGSEHQSDKVLVRSNGVLTYTAKDIAYHMWKFGLLDDDFAYKEKWPGLWTTASSGVPAAF 352

Query: 363 ---------------YVKRL--EAVAAAVSEKKA-------------------QINVLLC 386
                          Y +++  +A+AA   EK+A                   Q+ +   
Sbjct: 353 GRGDAVINVIDYRQEYPQKVVKQALAAVGYEKEAERLFHVPYGVVSLSKQTASQLGLETE 412

Query: 387 ELVRLY----RDGMPIKMSK---------RAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +   +Y    R G+ IK+S+         RA         V+ +   ++R+ ML    + 
Sbjct: 413 DGKSVYAMSGRKGIGIKISELIQHMKEAVRAQSTDASEATVEALAFAAIRYNMLRYNTTS 472

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            + FD  +   Q   N   Y+ Y YAR  SI  +AK         L P     + +E   
Sbjct: 473 DIVFDLTEAT-QVTGNTGIYLIYTYARANSIITKAKQA------GLSPEGATFKGAE--D 523

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +E  L+ HLA +  V   A  + EP  +  + ++LAS+++  +S 
Sbjct: 524 AERALLKHLAGWDTVKRKAAASFEPNLICTFAFELASLYNRFYSQ 568


>gi|229528909|ref|ZP_04418299.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332683|gb|EEN98169.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 591

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 41  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 100

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 101 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 154 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 213

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 214 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 253

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 254 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 294

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 295 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 354

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 355 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 408

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 409 LDEAQERAK--ALIESKNPELSAEEKAAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 466

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 467 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 517

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 518 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 571

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 572 TAKTIKQGLALLGIDTLERM 591


>gi|229522032|ref|ZP_04411449.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|254226080|ref|ZP_04919678.1| arginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621392|gb|EAZ49728.1| arginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|229340957|gb|EEO05962.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 599

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 417 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 526 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 580 TAKTIKQGLALLGIDTLERM 599


>gi|229552588|ref|ZP_04441313.1| arginine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539960|ref|YP_003174459.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314140|gb|EEN80113.1| arginine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151636|emb|CAR90608.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 560

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 142/589 (24%), Positives = 248/589 (42%), Gaps = 91/589 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+    G  +      L++ L   P  IA  +VA+I   P  + V   G G++N Y
Sbjct: 27  LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIASDLVAKIDASP-FEQVKAVG-GYVNFY 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   S+  ++L +I  SG  +G   +G+G  V I+  S N   PM +GH R  V+G+ LA
Sbjct: 84  LDKISFAHEVLKAIAQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209
           +++   GY   +  ++ D G Q   L ++      +A    D   +L + Y     +   
Sbjct: 143 NILQKVGYSPIKINHLGDWGTQFGKLIVAYKKWGSEADVKADPIKNLLQYYVKFHEVAET 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFH 266
             EL D+  +         W   ++D   +A  + +  R   L   N  + I   + D +
Sbjct: 203 DPELEDEARA---------WFKRLEDGDKEAITLWRWFRTVSLAEFNRIYKILGVDFDSY 253

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            G+ +   D +D++ +     E       S+  +  D+ +  L           +  L+K
Sbjct: 254 NGE-AFYNDKMDSVVK---TLEDKHLLKTSQGAEIVDLSKYNL-----------NPALIK 298

Query: 327 SDGSYT-YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
                T Y   DLA    + E   F   +YV+G++   + ++L+AV   +  + A  ++ 
Sbjct: 299 KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYEWAN-DIH 357

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGS 419
                 +  +G   K+S R G+ I L  V+                          EVG 
Sbjct: 358 HIPFGLITANGK--KLSTRRGNIILLEKVLKDAVGLAQQQIDEKHPDLPNAEKVAHEVGV 415

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI R+A +I P   
Sbjct: 416 GAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARAHSILRKA-NIAP--- 467

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                    P+ +  D +   ++  L +YP ++  A    EP  +A Y   LA  F+ ++
Sbjct: 468 --------APEVALSDPAAWDVLRALGDYPSIVVRAAKEYEPSVIAKYALRLAKAFNKYY 519

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +       V   + +L   RL +V A   ++ + L+++GV +P EM
Sbjct: 520 ANVK-------VLVEDSELP-ARLAMVSATTQVLENALHLLGVAAPEEM 560


>gi|327484607|gb|AEA79014.1| Arginyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 592

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 42  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 101

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKAAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 573 TAKTIKQGLALLGIDTLERM 592


>gi|332030674|gb|EGI70362.1| Arginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 684

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 147/613 (23%), Positives = 261/613 (42%), Gaps = 108/613 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +++    +   G    N+AM L++ L      + P  +A+ I++++K+   ++   IAG 
Sbjct: 121 VIVTTSTNPKFGDYQCNSAMPLAQQLSSSGFKVSPRDVAKEIMSKLKVSSVIEKYEIAGA 180

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+YL   + + +L + + +G      +  K  +V ++F S N    MHVGH R  ++
Sbjct: 181 GFINIYLKREFGQSVLRNWLWAGEVLPPYV--KKKRVVVDFSSPNIAKEMHVGHLRSTII 238

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+++ L+ + G++V R  ++ D G Q   L   +    Q    N  +  P    P   L
Sbjct: 239 GDSISRLLEYLGHDVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLTITP----PIEDL 290

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--------IIRDDLKALNIQHDI 258
           +   KE   ++  E   F +  +  +VK  + +  M         + R + + +  + DI
Sbjct: 291 QTFYKESKTRF-DEDEEFKKRAYECVVKLQAFEPNMTKAWKMICDVSRQEFEKVYTRLDI 349

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            + E    RG+             Q Y+ E I+   +SK   + D  RK  +      G 
Sbjct: 350 KLIE----RGES----------FYQKYM-ESIIQELESKNMLEEDNGRK--IMWGEKHGS 392

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN----MIYVMGSDHSGYVKRLEAVAAAV 374
            V   ++KSDG +TY  +D+A  K + E+   +    +IYV  +  S + + +++ A   
Sbjct: 393 GVPLTIVKSDGGFTYDTSDMACIKYRIEKERADWASILIYVTDAGQSLHFQIIKSCA--- 449

Query: 375 SEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE----------- 416
             K+A I   L    R+   G          K   R+GD + L  ++DE           
Sbjct: 450 --KRAGI---LKSFHRMDHVGFGAVLGEDKKKFKTRSGDTVKLSELLDEGLKRALQKLKE 504

Query: 417 -------------VGSDSVRFM------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                           +SV +       +L  +N E + F F K+ E  K N   Y+ YA
Sbjct: 505 KERDKVLSQEELKAAQESVAYGCIKYADLLHNRNHEYV-FSFDKMLE-DKGNTAVYLLYA 562

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
             R RSI R A +I  D   +L  R + +P   E +  E +L   L ++P VI   T   
Sbjct: 563 LTRIRSIARTA-NITKD---ELRQRSHEVPISLEHE-KEWKLAKVLLKFPDVILGVTEDL 617

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINS 572
               L  + Y+++  F   +       +   V+ +      K+ M RL L+ A A I+  
Sbjct: 618 YLNPLCEFCYEVSCAFTEFYD------KCYCVEKDQSGEIVKINMGRLLLMEATALILEK 671

Query: 573 GLNIIGVESPNEM 585
             +++G++S  +M
Sbjct: 672 CFSLLGLKSVAQM 684


>gi|26991765|ref|NP_747190.1| arginyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258317|sp|Q88CU1|SYR_PSEPK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24986874|gb|AAN70654.1|AE016709_6 arginyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 578

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++  +    D+  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   KV I+  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LRH+ + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F ++D       ++ Q +     E  L   LA++  ++ N      P+ L  YLYDLA
Sbjct: 478 KGFDEVD-----GKIVLQAAH----EQDLAARLAQFGEILNNVAEKGTPHVLCSYLYDLA 528

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          ++  RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETPSQQQSRLRLAALTGRTL 563


>gi|148550164|ref|YP_001270266.1| arginyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166232825|sp|A5WAC2|SYR_PSEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148514222|gb|ABQ81082.1| arginyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 578

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++  +    D+  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   KV I+  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LRH+ + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F ++D  +    V+    E D     L   LA++  ++ N      P+ L  YLYDLA
Sbjct: 478 KGFDEVDGKI----VLHAAHEQD-----LAARLAQFGEILNNVAEKGTPHVLCSYLYDLA 528

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          ++  RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETPSQQQSRLRLAALTGRTL 563


>gi|225352870|ref|ZP_03743893.1| hypothetical protein BIFPSEUDO_04506 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156297|gb|EEG69866.1| hypothetical protein BIFPSEUDO_04506 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 124

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 72/104 (69%), Gaps = 4/104 (3%)

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRL 367
           F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R  D     IY++G+DH GY+ R+
Sbjct: 18  FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLGADHHGYIGRM 77

Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            A+ AA  ++  + + +L+ +LV + +DG  ++MSKRAG+ +T+
Sbjct: 78  MAMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTI 121


>gi|309805389|ref|ZP_07699438.1| arginine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165316|gb|EFO67550.1| arginine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 558

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 139/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +      L++    +P  IA  + A++ ++ +   +   G  +IN  
Sbjct: 25  LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKL-VNDNFAEIEAVGP-YINFA 81

Query: 93  LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L  + L  ++    +YG     +G  V I+  S N   PM +GH R  V+G+++A
Sbjct: 82  IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205
            ++   G+   +  Y+ D G Q   L  +   W  ++A+  +       YY   +     
Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200

Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              L+  G+      E  D  + EL      +W    ++ S+Q   +I ++    L +  
Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D           
Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286

Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
            DD +  L LKSDG+  Y   DL A    K E  F   +YV G++ SG+ K+L+ V   +
Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 345

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410
                Q ++       + ++G   K+S R G+ + L                        
Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466
              V  +VG  +V F  L  KN  L +FDF     V+ +    P  YVQY  AR +SI R
Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +      D    L            D     +   +A++P +I+ A    EP  +A Y  
Sbjct: 459 KVNVEIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++P EM
Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558


>gi|188588753|ref|YP_001921709.1| arginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238691964|sp|B2UW74|SYR_CLOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188499034|gb|ACD52170.1| arginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 563

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 227/539 (42%), Gaps = 93/539 (17%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    +    ++ I+  G  YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKGVFAENTINKILKDGDSYGESNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G++L  +    GY+V    ++ D G Q   L +S +  W  ++AL       P      +
Sbjct: 137 GNSLYKMFKKEGYDVVGLNHLGDWGTQFGKL-ISAYNRWVDEEAL----EKAPIDELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD-DLKALNIQHDIF 259
           Y+K    + A+K  S      +E  +   K    D   QA+ K  RD  LK     +DI 
Sbjct: 192 YVKF--HDEAEKDPS----LEDEGRMYFKKLETGDAEAQALWKRFRDLSLKEFERVYDIL 245

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + D   G+      +  +++ L  +G + E       S   Q              ++
Sbjct: 246 GVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SNGAQ-------------VVM 285

Query: 317 GDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            DD + P   +LK DG+  Y   DLA   Y K  Y+  F   IYV+GS  + + K++  V
Sbjct: 286 LDDYNMPPCIVLKGDGASIYATRDLAAAMYRKKTYD--FYKSIYVVGSPQALHFKQVFKV 343

Query: 371 AA-----------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K ++ VLL +L+R   +     ++++  + 
Sbjct: 344 LELAGHEWANDCVHVGFGLVKFADRKLSTRKGEV-VLLDDLIRESVEKTLEVINEKNPEL 402

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466
                V  ++G  ++ F  L     + + FD+ ++   + +  P  YVQY+YAR  SI  
Sbjct: 403 ENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYSYARANSIIS 460

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A++I  ++D+                 E +L+  LA +   I+ AT   EP  L  Y+ 
Sbjct: 461 RAENISSEVDYSKLSSK----------EEFELVKVLANFNNQIKLATDKLEPSILTRYVI 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           D+A  F+  ++          +  ++  L   RL LV +   +I +GL ++G++   +M
Sbjct: 511 DVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563


>gi|168178492|ref|ZP_02613156.1| arginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670923|gb|EDT82897.1| arginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 563

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 248/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFQGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L        +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEEGSKEETELWNRFKNLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|332881403|ref|ZP_08449053.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680779|gb|EGJ53726.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 599

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 236/568 (41%), Gaps = 98/568 (17%)

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134
           P V + F A KGF+NL ++P+    +L+ I     ++G          V IE+ S N   
Sbjct: 72  PSVVADFNAVKGFLNLVIAPASWIGLLTDIHQDA-QFGLTEATDHSPLVMIEYSSPNTNK 130

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R  ++G  LA++MA +G  V +   +ND G  I    L+ + +Y        +
Sbjct: 131 PLHLGHVRNNLLGCALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLKYGNGATPEST 189

Query: 195 DLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-- 248
            +   +  G Y     KH  +++ +     +     +   P++K+ + + ++K   +D  
Sbjct: 190 GIKGDHLIGDYYVAFDKHYKEQIKELMEEGMSEEEAKNEAPLIKE-AREMLVKWENNDPE 248

Query: 249 LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMD 305
           ++AL   +   ++   D  ++     +    D +  +   Y EG     K K  +  D  
Sbjct: 249 VRALWRKMNEWVYAGFDVTYKA----LGVSFDKIYYESETYLEG-----KEKVLEGLD-- 297

Query: 306 RKQLLFRS---------TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
            K L FR          T  G D ++ LL+SDG+  Y   D+   K ++ +   D MIYV
Sbjct: 298 -KGLFFRKEDGSVWADLTPEGLD-EKLLLRSDGTSVYMTQDIGTAKLRFRDYPIDKMIYV 355

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G++ + + + L  +   +  +  +  V     +    +G   KM  R G  +    +V 
Sbjct: 356 VGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPNG---KMKSREGTVVDADDLVA 412

Query: 416 E------------------------------VGSDSVRFMML---WRKN-----SELLDF 437
           E                              VG  ++++ +L    RKN     +E +DF
Sbjct: 413 EMIGSARKMSEDKINKLTDLSEDEANEIARIVGLGALKYFILKVDARKNMLFNPAESIDF 472

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           +          N   ++QY YAR RSI R+A +    +     P  +  Q ++    E+ 
Sbjct: 473 N---------GNTGPFIQYTYARIRSILRKASEAGISI-----PETLSAQ-TDLSEKEIS 517

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  LA++P V++ A     P  +A Y YDL   ++  +           +   N     
Sbjct: 518 LIQMLADFPNVVKQAGSDYNPSCIANYCYDLVKEYNQFYHD------FSILHEENENKKT 571

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L   ++ II +G+ ++G+E P  M
Sbjct: 572 FRLVLSAEISKIIRTGMGLLGIEVPERM 599


>gi|218131430|ref|ZP_03460234.1| hypothetical protein BACEGG_03048 [Bacteroides eggerthii DSM 20697]
 gi|217986362|gb|EEC52699.1| hypothetical protein BACEGG_03048 [Bacteroides eggerthii DSM 20697]
          Length = 605

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 259/633 (40%), Gaps = 132/633 (20%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   ++ +    S F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSTFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I     +YG  +   K   V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHADA-QYGVVSATDKSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++A +G +V +   +ND G  I    L+  W     L   + + PE          G
Sbjct: 145 LANIIAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPETSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------- 247
            Y   + KH     KEL  K+  E L+  E K     K  S   +MK  R+         
Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQGEGLSEEEAK----AKAESESPLMKEAREMLVKWEAND 253

Query: 248 -DLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303
            +++AL   +   +++  D+ +R     +    D +  +   Y EG     K K  +  +
Sbjct: 254 PEVRALWKKMNDWVYVGFDETYR----MMGVTFDKIYYESETYLEG-----KEKVMEGLE 304

Query: 304 MDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
              K   +R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D MIY
Sbjct: 305 ---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMIY 361

Query: 355 VMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           V+G++ +                          G V+  E    +        + L+ E+
Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFDWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEM 421

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMML---WRKN-----S 432
           +   ++         +G+   L  +  E        VG  ++++ +L    RKN      
Sbjct: 422 INTAKE--------TSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKNMTFNPK 473

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           E +DF+          N   ++QY YAR +S+ R+AK+    +   L      P   E  
Sbjct: 474 ESIDFN---------GNTGPFIQYTYARIQSVLRKAKEAGITVPAQL------PLGIELS 518

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V++ A     P  +A Y YDL   ++  +           ++  N
Sbjct: 519 EKEEGLIQMIADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREEN 572

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 573 EAVKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|269138777|ref|YP_003295478.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984438|gb|ACY84267.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558769|gb|ADM41433.1| Arginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 577

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 135/591 (22%), Positives = 240/591 (40%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +GL P  +AE +VA + +D     V IAG GFIN++L  ++L    
Sbjct: 37  GDYQANGIMAAAKKMGLPPRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLAAQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + +      G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  DAALAD-PRLGVARVEPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L ++   + Q +    D  L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQGSSKTGDMALADLEAFY----------REAKKHYDE 203

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP-- 270
              F E     +VK     +Y  +   K++   ++     +D   + +++DD   G+   
Sbjct: 204 DAAFAERARGYVVKLQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVM-GESLY 262

Query: 271 SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           +P +  I+ +L  +G   E       S+      +D     F++   G+ +   + K DG
Sbjct: 263 NPMLPGIVADLKAKGLATE-------SEGATVVFLDE----FKNKE-GEPMGVIVQKKDG 310

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQI 381
            Y Y   D+A  K +YE  G + ++Y + S    +       V++   V  +VS +    
Sbjct: 311 GYLYTTTDIACAKYRYETLGANRILYYIDSRQHQHLMQAWAIVRKAGYVPDSVSLEHHMF 370

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
            ++L       +DG P K   RAG  I L  ++DE                         
Sbjct: 371 GMMLG------KDGKPFK--TRAGGTIKLADLLDEAIERAAKLIAAKNPELSGDELKALV 422

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF++A      
Sbjct: 423 EVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----G 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +D +     +   E      E  L   L ++   I +      P+ +  YLY++A +F  
Sbjct: 477 IDENALQGAITLTEDR----EKALATRLMQFEETILSVAREGTPHVMCAYLYEVAGLFSS 532

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           + A+   +   RL+L    A  + +GL+ +G+++   M
Sbjct: 533 FYEA------CPILNADEESVCASRLKLAALTARTLKTGLDTLGIKTVERM 577


>gi|218134083|ref|ZP_03462887.1| hypothetical protein BACPEC_01973 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991458|gb|EEC57464.1| hypothetical protein BACPEC_01973 [Bacteroides pectinophilus ATCC
           43243]
          Length = 588

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 137/612 (22%), Positives = 246/612 (40%), Gaps = 112/612 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V  RP  C +     N AM  ++     P  IA+ + A++      + V     GFINL 
Sbjct: 30  VSNRPDLCEY---QCNGAMAAAKAYKKAPFMIADDVAAKLAGSEVFEKVESVKPGFINLS 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +L+  L+ +     +YG +  GK   V +++  AN   P+HVGH R AV+G+++  
Sbjct: 87  LGGEFLKNYLADMAKDD-KYGYSNAGKEKTVIVDYGGANAAKPLHVGHLRSAVIGESIKR 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-- 210
           +  F+G +V  + ++ D G Q+  +   +  R  + +Y +++      Y G Y K     
Sbjct: 146 IQRFAGNKVIGDVHLGDWGLQMGLIIEELRDRKPELVYFDEN------YKGEYPKEAPFT 199

Query: 211 -KELADKY------SSELLNFPEEKWLPIVK----DYSVQAM----MKIIRDDLKA---- 251
             EL + Y      S E   F E   L   K    D +  A+    M + + DLK     
Sbjct: 200 ISELEEIYPAASAKSKEDPAFMERAHLATAKLQNGDPACTAIWNHIMAVSKADLKKNYDN 259

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDN---LARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L++  D++  E D     P  I+ +ID+      QG +   I     +K    C      
Sbjct: 260 LDVTFDLWKGESDAQPYIPDMIQKMIDDGIAHESQGAIVVDIQEETDTKELPPC------ 313

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
                          + KSDG+  Y  +DLA    + E+ +    Y+  +D     + L 
Sbjct: 314 --------------IVRKSDGAALYATSDLATL-VEREKLYSPDAYIYLADKR---QELH 355

Query: 369 AVAAAVSEKKAQINVLLCELVRLY------RDGMPIKMSKRAGDFITLRHVVDEV----- 417
                 + KKA I     ++  L       +DG P K   R+G  + L+++++++     
Sbjct: 356 FTQVFRTAKKAGIVPQDADMTFLGFGTMNGKDGKPFKT--RSGGVMRLQYLIEDIDKAVY 413

Query: 418 --GSDSVRFMMLWRKNSE----LLDFDFCKVKEQSKENPVF--------------YVQYA 457
              S++        KN+     L    +  +  Q+ ++ VF              Y+ Y 
Sbjct: 414 EKSSENRSMSEEEAKNTAKIVGLAALKYGDLSNQASKDYVFDIDRFTSFEGNTGPYILYT 473

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENAT 513
             R +SIF +  +               P+E   DT    SE +L++ L ++  V E+A 
Sbjct: 474 VVRIKSIFNKYAE-----------NGGRPEECSIDTAKNASEKKLMLSLVKFNEVFESAY 522

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+KL  ++Y++A  F G +           +   + K     + L+    +++   
Sbjct: 523 KDNAPHKLCQFIYEVADAFGGFYHD------TMILAETDEKKKQGYIALLGLTRNVLECC 576

Query: 574 LNIIGVESPNEM 585
           L+++G+ +P  M
Sbjct: 577 LDLLGIRTPERM 588


>gi|42523502|ref|NP_968882.1| hypothetical protein Bd2027 [Bdellovibrio bacteriovorus HD100]
 gi|81617243|sp|Q6MLI2|SYR_BDEBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|39575708|emb|CAE79875.1| argS [Bdellovibrio bacteriovorus HD100]
          Length = 580

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 127/572 (22%), Positives = 223/572 (38%), Gaps = 83/572 (14%)

Query: 52  ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           IL++ L   P  +A  + A++K      +  +A   +IN+        + + + ++ G  
Sbjct: 54  ILAKALKTAPPQVATAVAAQMK-----GATAVAAGPYINIRFDEQTHGEQVLATILDGSY 108

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           + + L+ K  K  IE+   N    +HVGH R   +GD +  ++ +SG E+    +  D G
Sbjct: 109 FKKPLMEKSPKTMIEYSQPNTHKELHVGHMRNLCLGDAIVRMLRYSGREIVSSTFPGDMG 168

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
             +        W  ++   +N   +PE           G+ L   YS   L   ++   P
Sbjct: 169 THV----AKCLWYMKK---HNQEPVPE--------TEKGEWLGRMYSKANLLLEDQNGTP 213

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +D + Q +  I+          +D+++   ++       +    D    + Y +E  +
Sbjct: 214 -QEDINRQELTAILHQLEGKTGPYYDLWLETREWSIELMKKVYAWADVTFDEWY-FESEM 271

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP------LLKSDGSYTYFAADLAYFKCKY 345
             P +   ++   + K L      +G D++        LLKSDG+  Y   DL   K K+
Sbjct: 272 DSPSAAWVKQLYAEGK-LEMSQGAIGKDLESEKLGFCMLLKSDGTGLYATKDLLLAKHKF 330

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           E    +  +YV+    + + K++  V   +  ++A+    L        DG    MS R 
Sbjct: 331 EDVKIEKSVYVVDMRQALHFKQVFRVLEILGFEQAKNCFHLQYNYVELPDG---AMSSRK 387

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY----------- 453
           G+ + LR +V  +  D V+   L R   E  + D  K+  Q  +  +FY           
Sbjct: 388 GNIVPLRELVHRM-EDHVKTTYLSRYKGEWSEEDVEKIAGQVAKGAIFYGMLRMDTNKKI 446

Query: 454 -----------------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV---IPQESEFDT 493
                            VQY+YAR  S+ R+            FPR     I        
Sbjct: 447 VFDMNEWLKLDGESGPFVQYSYARISSLGRK------------FPRTAGAKIDWSRLNHA 494

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE QL+  L  +   +  A    +P  +  YLYDLA  F+  +    E P         R
Sbjct: 495 SERQLMQSLGGFNTAVAAAAENFKPSAICTYLYDLAKSFNVFY---HECPIGTEADVATR 551

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    RL L  AV   + +GL ++G+ +P +M
Sbjct: 552 E---ARLALSEAVGLTLKNGLAVLGMPAPEKM 580


>gi|317968164|ref|ZP_07969554.1| arginyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 594

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 215/544 (39%), Gaps = 90/544 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PLG  P  IAE +V ++K D    +V     IAG GFIN+ L P  L
Sbjct: 43  GDFQANGALPLAKPLGQPPRKIAEAVVEQLKADESFMAVCQAPQIAGPGFINITLQPERL 102

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +    +     G   + +   V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 103 AAEVQQ-RLGDARLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 161

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217
           + V R  ++ D G Q   L   +     +AL   D+ DL               +L   Y
Sbjct: 162 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDL--------------GDLVAFY 207

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F E++         V  +       LKA  +  D   S  +F +     I D +
Sbjct: 208 REAKKRFDEDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 260

Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKS 327
           D  L+ +G  +     EG++   ++      D D    +F   + G D  +PL     KS
Sbjct: 261 DIRLSERGESFYNPYLEGVVRDLEATGLLVVD-DGAGCVFLEGVSGKD-GKPLPVIVQKS 318

Query: 328 DGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380
           DG + Y   DLA  + ++       G   ++YV  +  + +   +  VA  A    + A+
Sbjct: 319 DGGFNYATTDLAAIRYRFGSAPEGDGARRVVYVTDAGQANHFAGVFQVARRAGWLPEGAR 378

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLR----------------------------- 411
           +  +   LV+   DG   K+  RAGD + LR                             
Sbjct: 379 LEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERSEADLRRRLEEEGRSEDEAF 435

Query: 412 --HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
             HV + VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+  
Sbjct: 436 IAHVANTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARKGG 494

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D+       L       Q SE    E  L+  L ++  VI        P +L  YL++L+
Sbjct: 495 DLDAASTGGL-------QFSE--PQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFELS 545

Query: 530 SVFH 533
            VF+
Sbjct: 546 QVFN 549


>gi|260589619|ref|ZP_05855532.1| arginine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260539859|gb|EEX20428.1| arginine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 588

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 133/631 (21%), Positives = 261/631 (41%), Gaps = 104/631 (16%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +++  +KE     + ++K     V  RP  C +     N AM  ++     P+ IA  +V
Sbjct: 7   KIEEAVKEAFAASEYDEKFAKVTVSNRPDLCEY---QCNGAMAAAKTYKKAPIMIANSVV 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIE 126
            +++ +   +S      GFINL L+  +L   L+ ++      +E  +N       + I+
Sbjct: 64  EKLQDNEIFESAEAVNPGFINLKLNKEFLSGYLNDMLADEKLSVEEAKN----PKTIVID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  R  
Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIITELSKRQP 179

Query: 187 QALYNNDSDLPEGYYPG-----------VYLKHVGKELADK-YSSELLNFPEEKWLPIVK 234
             +Y +++   EG YP            +Y    GK   D+ Y +E L    E  L + K
Sbjct: 180 DLVYFDEN--YEGEYPKEAPFTVSELEEIYPTASGKSKEDEAYKNEAL----EATLQLQK 233

Query: 235 ---DYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               Y    Q +M++   DLK     L +  D++  E D     P+    ++D L   GY
Sbjct: 234 GRRGYRALWQHIMEVSVTDLKKNYAKLKVDFDLWKGEADADAYIPA----MVDYLKENGY 289

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFK 342
            Y                +D+  L+       D  + P   +LKSDG+  Y   DLA   
Sbjct: 290 AY----------------LDQGALVVDVKEETDTKEIPPCMILKSDGASLYNTTDLATIV 333

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + E    D +IYV+      +  ++   A  A + ++  Q++ +    +   +DG P K
Sbjct: 334 QRMEDYKPDEIIYVVDKRQELHFVQVFRCAKKAKLVDENTQLSFVGFGTMN-GKDGKPFK 392

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR----KNSE-------LLDFDFCKVKEQSKE 448
              R G  + L  ++ E+  +  + +   R    +N+E       L    +  +  Q+ +
Sbjct: 393 T--REGGVMRLERLIAEINEEMFKKITENRSVKDENAEKTAQMVGLSAIKYGDLSNQASK 450

Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + VF              Y+ Y   R +SI  +  +   ++D       V       + S
Sbjct: 451 DYVFDIERFTSFEGNTGPYILYTIVRIKSILSRYAESGKNIDKKAMKAAV-------NDS 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++ L+ +  +I  A   + P+++  Y+YDLA+ F+  +         + +   +  
Sbjct: 504 EKALMLELSRFNSIIAPAFEEKAPHRICSYIYDLANAFNSFYHE------TKILSEEDED 557

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + L+     ++ + ++++G ++P+ M
Sbjct: 558 KKASWICLLTLTEKVLETCIDLLGFDAPDRM 588


>gi|328773748|gb|EGF83785.1| hypothetical protein BATDEDRAFT_84510 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 780

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 139/597 (23%), Positives = 244/597 (40%), Gaps = 94/597 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E PRD A+G +S    +  +R  G+ P  +A  +  + + +  +      G  F+N  
Sbjct: 234 LLEEPRDKANGDMSL--PLPRTRLPGI-PTQLAASLAKQFQPNNLILKAVATGP-FLNFT 289

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            + + L +K++SS V  G  YG N  G G    +EF S N   P H GH R  ++G  L 
Sbjct: 290 FNKAILSKKVISSAVTLGTSYGSNSDGFGKFAVVEFSSPNIAKPFHAGHLRSTIIGSFLK 349

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209
           +++  SG+      Y+ D G Q   LA+  F RY   +AL  +    P  +   VY++  
Sbjct: 350 NVLDVSGWSTVSINYLGDWGKQFGLLAVG-FDRYGSDEALSTD----PIRHLYDVYVRIN 404

Query: 210 GKELAD--------KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            + + D         Y  ++ +  E  +  + K +   +++K  ++    LN+  DI+  
Sbjct: 405 TEAIEDASIHDQARAYFKKMEDGDEHAY-NLWKRFRDLSIVK-YKEVYGRLNVHFDIYSG 462

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E  +     S +R +++ L        G+L P +        +D K+      ++G    
Sbjct: 463 ESQYSL---SQMRSVMNELQNV-----GLLVPDQGALI----VDLKEYKLGVAVIG---- 506

Query: 322 RPLLKSDGSYTYFAADLAYFKC--KYERGFDNMIYVMGSDHSGYVKRL------------ 367
               K+DGS  Y + D+A   C  K    FD+M YV+G+    + K+L            
Sbjct: 507 ----KTDGSLLYLSRDIAA-ACDRKDTFDFDHMFYVVGTQQDHHFKQLFKILELQGKTWV 561

Query: 368 -----------EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHV 413
                      ++    +S ++  + V L +++   RD M   M K    +  +     V
Sbjct: 562 DRCSHIGFGLIKSKDGNMSTRRGTV-VFLEDILNTVRDEMHANMKKNEHKYAQVVDPERV 620

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIF 472
            D VG  +     +  + ++   FD+ ++   +    P  Y+QYA++R  SI RQ++   
Sbjct: 621 ADIVGQSATMIQDMGARRAKDYTFDWSRIFSFEGDTGP--YLQYAHSRLCSIERQSE--- 675

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY----LYDL 528
             L         I      +   L LI  +A YP VI + +   EP  L  Y     + +
Sbjct: 676 -HLQVSADTLLDIDLTLLVEPQALALIEAIALYPDVIRDLSKNYEPCNLVSYSLRLSHAI 734

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +S     W  G+E P           L   RL L  A    +++ L  +G+     M
Sbjct: 735 SSAIDVLWVSGQEKP-----------LAHARLALYVAARFALSNALRTLGLTPLTRM 780


>gi|153213687|ref|ZP_01948939.1| arginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153801962|ref|ZP_01956548.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124115748|gb|EAY34568.1| arginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124122476|gb|EAY41219.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 599

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 132/619 (21%), Positives = 235/619 (37%), Gaps = 134/619 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 417 LDEAQERAKALIESKNLELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 475

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++ 
Sbjct: 476 EGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFE 526

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA +F   +           + A    +   RL+L    
Sbjct: 527 EAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALT 580

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL ++G+++   M
Sbjct: 581 AKTIKQGLALLGIDTLERM 599


>gi|113971826|ref|YP_735619.1| arginyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130050|sp|Q0HEF5|SYR_SHESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113886510|gb|ABI40562.1| arginyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 581

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQLIIDNLPASAYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  S L   L +  +S    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDSALANQLQA-AISDEHLGIKLPTPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRTLEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D  TL  +   VG  +V++  L +  +    F F ++    + N   Y+ YAY R   IF
Sbjct: 419 DEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++A DI  DL      + V+  E E D         LA++  ++       +P+ L  YL
Sbjct: 478 KRATDI--DLSQ---AKIVLEHEKEKDLGN-----KLAQFGEILSRVIDKGQPHVLCGYL 527

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA  F   +      P L    A+N +    RL L    A+ +  GLN++G+E+   M
Sbjct: 528 YELAGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581


>gi|317472406|ref|ZP_07931731.1| arginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900126|gb|EFV22115.1| arginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 490

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 127/541 (23%), Positives = 232/541 (42%), Gaps = 97/541 (17%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++  + ++ ++L  + V    YG + IG G  + I++ S N     HVGH R  ++
Sbjct: 4   YVNFFIDRTMFVSEMLKQVSVDN--YGSSEIGCGKTICIDYSSPNVAKNFHVGHLRTTLI 61

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNND-SDLPEGYYPGV 204
           G+++  +    GY V R  ++ D G Q   L ++   W  ++A+  N  S+L +     +
Sbjct: 62  GNSIYRIYKKLGYRVERINHLGDWGTQFGKLIVAYKKWGSKEAVEQNGISELMK-----I 116

Query: 205 YLK-HVGKELADKYSSEL------LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNI 254
           Y+K H   E  D  + E       +   +E+ L I    KD S+    +I     + L++
Sbjct: 117 YVKFHEEAEKDDTLNDEARAWFVKMEQGDEEALSIWEWFKDISLIEYKRI----YELLDV 172

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+R   S    ++D L ++G + E       S+     D+++        
Sbjct: 173 DFDSYAGE-SFYRDKTSA---VVDELKKKGMLKE-------SEGAFIVDLEKY------- 214

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
              D     ++K DGS  Y   DLA   Y K  Y+  F+  IYV G +   +  ++  V 
Sbjct: 215 ---DMTPCLIMKKDGSSIYATRDLAAIFYRKKTYD--FEKCIYVTGMEQKLHFAQVFKVV 269

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
             +  + A+ +++      +  +G   K+S R+G+ I    ++ E               
Sbjct: 270 ELMGYEWAKTDLIHVPYGLVSLEGG--KLSTRSGNIIYAEDILRESVSKIKEVINDKNPD 327

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  ++ F  L+ +  + + F + K+     E    YVQY YAR  S+ R
Sbjct: 328 LQDKEEVAKMVGIGAIIFNDLYNQRIKDVTFSWDKIHSFDGETGP-YVQYTYARAASVLR 386

Query: 467 QA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           +    D+  ++D  L            D + + L+  L  +P V+E A    EP  +A +
Sbjct: 387 KTGITDVPEEIDSSLLT----------DEASVSLLKELIRFPEVVETAAERLEPSVVARF 436

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +  +A  F+ H+ H  EN         + KL   R++LV      I  GL+++G++ P +
Sbjct: 437 VMSVAQAFN-HFYH--ENQ----CNVEDEKLKRARVKLVIIAKEAIKDGLDLLGMKCPEQ 489

Query: 585 M 585
           M
Sbjct: 490 M 490


>gi|332299753|ref|YP_004441674.1| Arginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176816|gb|AEE12506.1| Arginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 604

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 128/586 (21%), Positives = 236/586 (40%), Gaps = 98/586 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGK 119
           P   AE I A+++   D+ + +   KGF+NL L+ +     L  I  +   YG      +
Sbjct: 56  PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDTVWISALREIAETP-HYGHITPTAQ 114

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G +LA ++  SG+ V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           + + R+        S     +  G Y     KE    Y +EL         P   D  V+
Sbjct: 175 A-WLRWGNGETPESSGKKGDHLIGDYYVRFDKE----YRAELAQIRAAH--PDWSDEEVE 227

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287
           A  +++ D  + L            + +GDP  +R +             +  +R G  +
Sbjct: 228 AKSQLMADARQMLR----------QWEQGDPE-VRALWRQMNEWVYKGFDETYSRMGVSF 276

Query: 288 EGILPPPKSKTTQKCDMDR--KQLLFRSTMVG--------DDVDRP-LLKSDGSYTYFAA 336
           + I     +    + ++ R  K+ LF     G        + +D+  LL+SDG+  Y   
Sbjct: 277 DKIYYESDTYLVGREEVLRGLKEGLFERHEDGSVWADFEAEGLDKKILLRSDGTSVYITQ 336

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394
           D+   K +Y+    D M+YV+G++   + + L  +   +  K  + +      +V L   
Sbjct: 337 DIGTAKLRYQDFPIDQMVYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPNG 396

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------------KNSELLDFD 438
               KM  R G  +    ++D +   ++      +                + +E++   
Sbjct: 397 ----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVELAAEPTAEELRTAEMVGLG 452

Query: 439 FCK---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
             K   +K   ++N +F              ++QY YAR  S+ ++A         ++  
Sbjct: 453 ALKYFILKVDPRKNMMFNPEESIDFNGNTGPFIQYTYARICSLLQKAD--------EMGY 504

Query: 482 RNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           ++ +P+      S  E  L+  L +YP V++ A  +  P ++A Y YDL   ++  +   
Sbjct: 505 KHQLPEGGALALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYH-- 562

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   ++  +  L  MRLQL   VA  I+S + ++G+  P  M
Sbjct: 563 ----ECSVLREEDEALRSMRLQLSKTVAETIHSAMGLLGIALPERM 604


>gi|260906982|ref|ZP_05915304.1| arginyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 588

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 142/611 (23%), Positives = 245/611 (40%), Gaps = 117/611 (19%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N A+ L++ L   P  IA  IV  + +    ++  I+G GFINL  +  +
Sbjct: 32  RSSQFADFQANVALPLAKELKSKPRDIANTIVGNLDLADICETPEISGPGFINLTFTSDF 91

Query: 98  LRKILSSIVVS-------GIEYGRNLIGK---GTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L   L+    +           G    G    G +V I++ + N    MHVGH R  VVG
Sbjct: 92  LASTLNQGTAAEAVAETPATTEGATSEGAAAAGQRVVIDYSAPNVAKEMHVGHLRTTVVG 151

Query: 148 DTLASLMAFSGYEVTREYYINDAG-------------------AQINTLALSVFWRYQQA 188
           D LA    F G  V R+ +I D G                   AQ  +   + F++  +A
Sbjct: 152 DALARTHEFLGNTVVRQNHIGDWGTPFGMLIEHLLDVGIESETAQDISANPNAFYQAARA 211

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKII- 245
            +++D    E +      + V  +  DK + EL     E+ +   K Y   + +++ +  
Sbjct: 212 KFDSD----EAFATRARARVVELQGGDKQTLELW----ERLVGFSKTYFNHIYSLLDVTL 263

Query: 246 -RDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPP-PKSKTTQKC 302
             DDL   +I +D             +  +++ D  LAR   + +G L   P+  T ++ 
Sbjct: 264 TDDDLAGESIYNDDL----------AAVCQELEDAGLAR---ISDGALCVFPEGFTGRE- 309

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
                         G+ +   + KSDG Y Y   DLA  + +      D ++YV+G+  +
Sbjct: 310 --------------GEPLPLIIRKSDGGYGYATTDLAAVRHRVRNLNADRVLYVVGTPQA 355

Query: 362 GYVKRLEAVAAA-------VSEKKAQINVLLCELVRLYR--DGMPIKMSKRAGDFI---- 408
            + + + ++A A       V  +  +I  +L +  ++ R   G P+++++   + +    
Sbjct: 356 MHFEMVFSIARAAGWLPEGVEFEHVKIGNVLGDDGKILRTRSGAPVRLAELLDEAVARAK 415

Query: 409 -TLRH------------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
            TL+             V   VG  +V++  L   +     FD  ++      N   Y+Q
Sbjct: 416 ATLQESNVEFDAEEEALVAKTVGIGAVKYADLSVAHDTSYTFDLDRMLVPIG-NTAPYLQ 474

Query: 456 YAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           YA AR RSI R+A+ D F      L            + +E  L + L  +  V+     
Sbjct: 475 YAGARIRSILRKAEGDAFTAAPIHLG-----------EAAERDLGLALLGFSDVVAEVVA 523

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P++L  YL+DLA  F   +    + P L    A  R     RL+L   V  ++ +GL
Sbjct: 524 GSAPHRLCTYLFDLAQSFTSFY---EQCPVLIAETAEVRD---SRLRLSQTVLEVLEAGL 577

Query: 575 NIIGVESPNEM 585
            ++G+  P  M
Sbjct: 578 GVLGIRVPERM 588


>gi|313887236|ref|ZP_07820931.1| arginine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923327|gb|EFR34141.1| arginine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 604

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 128/586 (21%), Positives = 236/586 (40%), Gaps = 98/586 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGK 119
           P   AE I A+++   D+ + +   KGF+NL L+ +     L  I  +   YG      +
Sbjct: 56  PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDTVWISALREIAETP-RYGHITPTAQ 114

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G +LA ++  SG+ V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           + + R+        S     +  G Y     KE    Y +EL         P   D  V+
Sbjct: 175 A-WLRWGNGETPESSGKKGDHLIGDYYVRFDKE----YRAELAQIRAAH--PDWSDEEVE 227

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287
           A  +++ D  + L            + +GDP  +R +             +  +R G  +
Sbjct: 228 AKSQLMADARQMLR----------QWEQGDPE-VRALWRQMNEWVYKGFDETYSRMGVSF 276

Query: 288 EGILPPPKSKTTQKCDMDR--KQLLFRSTMVG--------DDVDRP-LLKSDGSYTYFAA 336
           + I     +    + ++ R  K+ LF     G        + +D+  LL+SDG+  Y   
Sbjct: 277 DKIYYESDTYLVGREEVLRGLKEGLFERHEDGSVWADFEAEGLDKKILLRSDGTSVYITQ 336

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394
           D+   K +Y+    D M+YV+G++   + + L  +   +  K  + +      +V L   
Sbjct: 337 DIGTAKLRYQDFPIDQMVYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPNG 396

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------------KNSELLDFD 438
               KM  R G  +    ++D +   ++      +                + +E++   
Sbjct: 397 ----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVELAAEPTAEELRTAEMVGLG 452

Query: 439 FCK---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
             K   +K   ++N +F              ++QY YAR  S+ ++A         ++  
Sbjct: 453 ALKYFILKVDPRKNMMFNPEESIDFNGNTGPFIQYTYARICSLLQKAD--------EMGY 504

Query: 482 RNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           ++ +P+      S  E  L+  L +YP V++ A  +  P ++A Y YDL   ++  +   
Sbjct: 505 KHQLPEGGTLALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYH-- 562

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   ++  +  L  MRLQL   VA  I+S + ++G+  P  M
Sbjct: 563 ----ECSVLREEDEALRSMRLQLSKTVAETIHSAMGLLGIALPERM 604


>gi|118790236|ref|XP_318119.3| AGAP004708-PA [Anopheles gambiae str. PEST]
 gi|116122419|gb|EAA13294.3| AGAP004708-PA [Anopheles gambiae str. PEST]
          Length = 663

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 243/539 (45%), Gaps = 88/539 (16%)

Query: 43  GHLSTNAAMILSRPLGL-----DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM +++ L        P  +A+ +VA + K  P VD + IAG G++N++LS S
Sbjct: 113 GDYQCNSAMQIAQHLKQLSVKSSPREVAQKLVAELQKPIPCVDRLEIAGAGYVNIFLSRS 172

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y  + + SI+  GI     LI K  +V ++F S N    MHVGH R  ++GD++   + +
Sbjct: 173 YGEQRIMSILRHGIVV--PLIEK-KRVIVDFSSPNVAKEMHVGHLRSTIIGDSICRFLEY 229

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELA 214
            G++V R  +I D G Q   L   +  R+   Q      SDL + +Y    ++    E+ 
Sbjct: 230 LGHDVLRINHIGDWGTQFGMLIAHLQDRFPNFQTESPPISDL-QAFYKESKVRFDSDEVF 288

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            K + E +   +   L  +K +++  +  + R + + +  + D+ + E    RG+    S
Sbjct: 289 KKRAYECVVKLQSGELSYLKAWNL--ICDVSRKEFQTIYNRLDVKLVE----RGESFYQS 342

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSD 328
            +  I++ L + G++ E                D  +L+    M G++   +   ++KSD
Sbjct: 343 RMEKIVEELKQDGFLEE----------------DEGRLI----MWGENRAGIPLTIVKSD 382

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVL 384
           G +TY  +D+A  K +  E   D +IYV  +  + + + + + A     + E K +++ +
Sbjct: 383 GGFTYDTSDMAAIKQRLQEEKADWLIYVTDAGQATHFQTIFSCAKRAKILQESKHRVDHV 442

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------VGSD 420
              +V L  DG   K   R+GD + L  +++E                           +
Sbjct: 443 GFGVV-LGEDGKKFKT--RSGDTVKLTELLNEGLRRAMEKLVQKERNLVLTQEELVAAQE 499

Query: 421 SVRFMML------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           SV +  +        +N+E + F F K+ E  K N   Y+ YAY R RSI R+    F +
Sbjct: 500 SVAYGCIKYADLSHNRNNEYV-FSFDKMLE-DKGNTAVYLLYAYTRIRSIARKCGGDFAN 557

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI-ENATIAQEPYKLAFYLYDLASVF 532
               +    VI  + E +    ++++   +   +I +N ++    + L  ++Y++ + F
Sbjct: 558 DMQKVIDSTVIKLDHEKEWKLAKVLLRFTDVMLLIMKNLSL----HHLCEFVYEICTAF 612


>gi|313204952|ref|YP_004043609.1| arginyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444268|gb|ADQ80624.1| arginyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 597

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 122/571 (21%), Positives = 229/571 (40%), Gaps = 125/571 (21%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL +S SY  + L+ I  +     +        + IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLSISKSYWLETLNLIHSTPAFGTKTATDDAELMMIEYSSPNTNKPLHLGHIRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYYP 202
           +G ++A +   +G++V +   +ND G  I  + LA  +F   +    +    D   G Y 
Sbjct: 141 LGHSIAEIQKANGWKVIKTNIVNDRGIHICKSMLAWKLFGNGETPDSSGLKGDHLVGKYY 200

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            ++ KH   E+ +     +     +K  P++                  L  Q  +   E
Sbjct: 201 VIFDKHYKAEIKELIEKGMSEEEAKKSAPLI------------------LEAQKMLLAWE 242

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR---------------- 306
           ++    DP  +R + + +   G+VY G     K+ T      D+                
Sbjct: 243 NN----DPE-VRQLWETM--NGWVYAGF---DKTYTQMGVSFDKIYYESETYLEGKDKVE 292

Query: 307 ----KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
                 + +R       + + GD +D + LL++DG+  Y   D+   K +Y+    + M+
Sbjct: 293 EGLANGVFYRREDGSVWADLTGDGLDEKLLLRADGTSVYMTQDIGTAKLRYDDYPINKMV 352

Query: 354 YVMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCE 387
           YV+G++ +                          G V+  E    +        + L+ E
Sbjct: 353 YVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEGKMKSREGTVVDADDLMSE 412

Query: 388 LVRLYRDGMPIKMSKRAGDFIT-----LRHVVDEVGSDSVRFMMLW---RKN-----SEL 434
           ++   R+      S+  G         +  +V  VG  S+++ +L    RKN      E 
Sbjct: 413 MIETARE-----TSQELGKLDNCTPEEIETIVRMVGLGSLKYFILKVDPRKNMTFNPKES 467

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +DF+          N   ++QY +AR +S+ R+A +    L+F     ++   + E    
Sbjct: 468 IDFN---------GNTGPFIQYTHARIKSVLRKASE--QGLEFG----SINNTQLEISEK 512

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+  L E+P V++ A     P  +A Y+YDL   ++  +           ++  N  
Sbjct: 513 ESYLVQSLTEFPAVVKQAGDEFSPALIANYIYDLVKEYNQFYHD------FTILKEENAA 566

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   RL L  ++AS+I +G+ ++G++ P  M
Sbjct: 567 LKQFRLILSESIASVIKTGMGLLGIDVPERM 597


>gi|325275658|ref|ZP_08141554.1| arginyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324099202|gb|EGB97152.1| arginyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 578

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++  +    D+  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   KV ++  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADA-HLGARKAGPAQKVVVDLSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174



 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR + + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRRIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F   D       ++ Q +     E  L   LA++   + +      P+ L  YLYDLA
Sbjct: 478 KRFDQAD-----GKIVLQAAH----EQDLAARLAQFGETLNSVAEKGTPHVLCSYLYDLA 528

Query: 530 SVFHGHWSH----GRENP-----RLRFVQANNRKL 555
            +F   + +      E P     RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETPEQQQSRLRLAALTGRTL 563


>gi|153939026|ref|YP_001390429.1| arginyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166232779|sp|A7GCB9|SYR_CLOBL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152934922|gb|ABS40420.1| arginine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318516|gb|ADF98893.1| arginine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 563

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 248/584 (42%), Gaps = 115/584 (19%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFP-- 225
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNFKNL 216

Query: 226 ------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                 E +     KD S++   K+       L I+ D    E        S   D +D 
Sbjct: 217 EDGSKEETELWNRFKDLSLKEFNKV----YDMLGIKFDSLAGE--------SFYSDKMDA 264

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYT 332
           + ++                    +D K LL  S     ++ D+ + P   + KSDG+  
Sbjct: 265 VVQE--------------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATI 304

Query: 333 YFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388
           Y   DLA   Y K  Y+  F   IYV+G+  + + K++      +    A     +   L
Sbjct: 305 YATRDLAAAIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGL 362

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD---------- 438
           V+L       K+S R GD + L  ++++   ++++  ++  KN  L + +          
Sbjct: 363 VKLANK----KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGA 416

Query: 439 --FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
             F  +K   + + VF              YV+Y+YAR +SI R+A ++  + D+     
Sbjct: 417 VVFTYLKNNRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY----- 471

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRE 541
           + +  + EF+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG  
Sbjct: 472 SKLSSKEEFELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-- 524

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 525 -----ILNAEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|307718710|ref|YP_003874242.1| hypothetical protein STHERM_c10230 [Spirochaeta thermophila DSM
           6192]
 gi|306532435|gb|ADN01969.1| hypothetical protein STHERM_c10230 [Spirochaeta thermophila DSM
           6192]
          Length = 587

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 228/556 (41%), Gaps = 76/556 (13%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE +VAR+  +  V  +  AG G++NL+L   ++   +LS I  +G  YG   + +
Sbjct: 65  PQKIAEEVVARLLPEGAVRKIEGAG-GYVNLFLDREAFALSVLSDIAHAGPGYGAGTLHQ 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +EF   N   P+H+GH R  ++G++++ ++A  G +V +   IND G  I    L
Sbjct: 124 DKRIMVEFSCPNTNKPLHLGHMRNNILGESVSRILASQGADVLKVNLINDRGIHICKSML 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +     +          P+ +    Y+K       D  + E        W     D  V+
Sbjct: 184 AYKKFGEGKTPEEVGKKPDHFVGDFYVKFNEWAKEDSTAEEQARRMLRAWED--GDAEVR 241

Query: 240 AM--------MKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           A+        ++ I    +   I  D I+   D +  G     RD++      G  Y+  
Sbjct: 242 ALWEKMNRWAIEGIEQTYRRTGISFDKIYYESDTYLLG-----RDLVLKGLEDGVFYQ-- 294

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349
               +   +   D+         + +G D  + LL+SDG+  Y   DL     +Y+   F
Sbjct: 295 ----EEDGSVWVDL---------SEIGLD-KKVLLRSDGTSLYLTQDLGTAVARYQDWAF 340

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ---------INV----------------- 383
           D +IYV+ S+ + + + L  V   +    A+         +N+                 
Sbjct: 341 DLLIYVVASEQNYHFRVLFYVLEKLGFSWAKNLYHLSYGMVNLPEGKMKSREGTVVDADD 400

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL  LV + R+   I+   R  +   +    + +   ++ + +L    ++ + F+  K  
Sbjct: 401 LLDRLVEMARE--EIREKGRVDEVEDIDRTAEAIALGALHYFLLQVSPNKDMIFN-PKES 457

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QY  AR  S+ R+A    P L   + P   +P     D +  +LIV L+
Sbjct: 458 LSLTGNTGPYLQYMGARICSMERKAD---PSL---VVPVEEVPTAELVDDASWELIVLLS 511

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P V+E+A     P  +  +LY+L   F   +    +NP    +   N+     RL L 
Sbjct: 512 QFPEVVESAAREYNPSLVIGFLYELGKTFSSFY---HDNP---IITHPNKDTARARLALA 565

Query: 564 HAVASIINSGLNIIGV 579
             +  ++ +G  ++ +
Sbjct: 566 RGIRQVLENGFRLVNI 581


>gi|257413782|ref|ZP_05591795.1| arginine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202281|gb|EEV00566.1| arginine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 595

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 123/597 (20%), Positives = 240/597 (40%), Gaps = 81/597 (13%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  IA+ + A++              GF+NL L  
Sbjct: 33  RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVAAKLAEASMFSMTESVKPGFLNLKLDE 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++L   ++ +      +G         + I++   N   P+HVGH R A++G+++  +  
Sbjct: 90  AFLASYVADMQKDEGRFGCEKAKNPKTIMIDYGGPNVAKPLHVGHLRSAIIGESIKRIGK 149

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202
           F+G++V  + ++ D G Q+  +   +  R    +Y   N + + P          E  YP
Sbjct: 150 FAGHKVIGDVHLGDWGLQMGLIITELKLRQPDLVYFDENFEGEYPKEAPFTISELEEIYP 209

Query: 203 GVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
               K       KE A + + EL N    K    +  + +   +  ++ + + LN+  ++
Sbjct: 210 TASKKSKEDEAYKEAAMQATYELQN--GRKGYQALLSHILNVSVTDLKKNYENLNVSFEL 267

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D     P+ ++ + D+     YV +G L         K D D K++     M+  
Sbjct: 268 WKGESDAQPYIPAMVQKMKDD--GFAYVSDGALV-----VDVKEDTDTKEI--PPCMI-- 316

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
                 LKSDG+  Y   DLA    + E    D +IYV+      +  ++   A      
Sbjct: 317 ------LKSDGASLYNTTDLATIVWREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLV 370

Query: 378 KAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K +  +       +  +DG P K   R G  + L ++V E+ ++ ++ +   +K  E L 
Sbjct: 371 KPETELKFLGFGTMNGKDGKPFKT--RDGGVMRLEYLVSEIDNEMLKKITENQKAKENLG 428

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQ-------- 487
               + KE +K   +  ++Y     ++    +KD   D+D F  F  N  P         
Sbjct: 429 ISEEEAKETAKTVALAAIKYGDLSNQA----SKDYIFDIDRFTSFEGNTGPYILYTIVRI 484

Query: 488 -------------------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                               S    SE  L++ ++++  VI+ A     P+K+  Y+YDL
Sbjct: 485 KSILHKYHDLGKSAEGAVITSAHSESEKNLMLEISKFNAVIDGAFADTAPHKICSYIYDL 544

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ F+  +         + +   +  +    ++L+    S++ + ++++G  +P  M
Sbjct: 545 ANAFNSFYH------ETKIMSEEDETVQKSYIRLLELTKSVLETSIDLLGFSAPERM 595


>gi|223042112|ref|ZP_03612285.1| arginyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017100|gb|EEF15539.1| arginyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 575

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 241/585 (41%), Gaps = 88/585 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    +D  VD + IAG GFIN++L+ ++L +  
Sbjct: 37  GDYQANGAMGAAKKLGMNPREFAQKILDNANLDGIVDKLEIAGPGFINIFLNKAWLAEN- 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++  +  + +G       T V +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 96  ANQALQAVNFGIQTANPQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154

Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L A       + A     SDL E +Y         KE  D   +  
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYDSDEA-- 205

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNL 280
             F E+    +VK  S     + +   L  + + H+    ++++ R + +   +D++   
Sbjct: 206 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLTEKDVMGE- 258

Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMVGDDVDRPL----LKSDGSYTY 333
                +Y  +LP   +    K    + +   ++F       D D P+     K DG + Y
Sbjct: 259 ----SLYNPMLPEIVADLKAKGLAVEDEGALVVFLDEFKNKDGD-PMGVIVQKKDGGFLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVLLCEL--- 388
              D+A  K +YE    D  +    S  + ++++    A  ++ K   + +    E    
Sbjct: 314 TTTDVAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITRKAGYVPDSFSLEHPFF 369

Query: 389 -VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
            + L +DG P K   R+G  + L+ ++DE                           V   
Sbjct: 370 GMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISARSTDLTAEEKAAVVEAVAIG 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +  
Sbjct: 428 SVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFARA-----GIDANEL 481

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              +   E +    E  L V L ++   +        P+ L  YLY+LA  F   +    
Sbjct: 482 TGEIHLTEDK----ERALAVKLLQFEEALNGVAKEGMPHILCQYLYELAGTFSSFY---E 534

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P L   +A    +   RL+L    A  +  GL+++G+++  +M
Sbjct: 535 ACPILNAEEA----VKNSRLRLAALTAKTLKQGLDLLGIKTVEKM 575


>gi|297519857|ref|ZP_06938243.1| arginyl-tRNA synthetase [Escherichia coli OP50]
          Length = 489

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 201/467 (43%), Gaps = 68/467 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + ++     V IAG GFIN++L P++L + +
Sbjct: 37  GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              + S    G     K T V +++ + N    MHVGH R  ++GD     + F G++V 
Sbjct: 97  QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218
           R  ++ D G Q   L   + W  +Q   N      +DL EG+Y            A K+ 
Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276
            E   F E     +VK   +Q+  +  R+  + L    DI ++++   + R + +  RD 
Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333
           +   +    +  GI+   K+K     + +   ++F        G+ +   + K DG Y Y
Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
              D+A  K +YE    D ++Y + S    ++ +  A+   A  V E     + +   + 
Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   RAG  + L  ++DE                           VG  +V
Sbjct: 373 -LGKDGKPFKT--RAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           ++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A+
Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAE 475


>gi|196006025|ref|XP_002112879.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens]
 gi|190584920|gb|EDV24989.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens]
          Length = 668

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 248/590 (42%), Gaps = 87/590 (14%)

Query: 43  GHLSTNAAMILSRPL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AMILS+ L      L P ++AE I+  +  +  ++   IAG GFIN+ +   +
Sbjct: 119 GDYQCNNAMILSKVLKENGKSLSPRSVAEQIIQHLPANDVLEKTEIAGPGFINITIKKHF 178

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +  +LS I++ G+     ++ +  +V ++F S N    MHVGH R  ++GD+++ L+ F 
Sbjct: 179 ILSLLSDIIMYGVR--PPVMNRKMRVLVDFSSPNVAKEMHVGHLRSTIIGDSISRLLEFV 236

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G++V R  ++ D G Q   L   +   + +  Y N S       P +       +L   Y
Sbjct: 237 GHDVVRISHLGDWGTQFGMLIAHLRDTFPK--YLNQS-------PPI------ADLQAFY 281

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +  + F E+    + K  + +A++K+     D  KA  +  D  +S+++F +      R
Sbjct: 282 KAAKVRFDED---AVFKKRAYEAVVKLQARESDYFKAWEMICD--VSKNEFEKIYQ---R 333

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPL--LKSD 328
             +  + R    Y+ ++           D+D + LL     R  +   ++  PL  +KSD
Sbjct: 334 LGVKVVNRGESFYQDMMIDVVK------DLDTRGLLELDEGRKILKVPNIKVPLTIVKSD 387

Query: 329 GSYTYFAADLAYFKCK-YERGFDNMIYVM-------------GSDHSGYVKRLEA----- 369
           G +TY  +D+A  + +  +   D +IY+               S+  GYV R        
Sbjct: 388 GGFTYDTSDMAAMRQRVMDEKADWLIYITDGGQGLHFEIIFSASEAVGYVNRKHVRVVHV 447

Query: 370 -VAAAVSEKKAQINVLLCELVR---LYRDGM---PIKMSKRAGDFI----TLRHVVDEVG 418
                + E K +      + VR   L  +G+     K+  +  D +     L      V 
Sbjct: 448 PFGVVLGEDKKKFKTRSTDTVRLVDLLDEGIRRAKAKLIDKGRDKVLSKEELEVAAKAVA 507

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              +++  L R  +    F F K+ +  K N   Y+ YA  R RSI R A     ++   
Sbjct: 508 YGCIKYADLSRNRTGDYIFSFDKMLD-DKGNTAVYLLYALTRIRSIARLA-----NVSSS 561

Query: 479 LFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              +       EFD   E +L   +  +P ++E        + L  ++Y+L+  F   + 
Sbjct: 562 ELTKVAESASIEFDHPKEWKLAKLILRFPEILEKILDDLLLHPLCDFMYELSCTFTEFYD 621

Query: 538 --HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  E  R         K+ M RL L  A A I+    +++G++  ++M
Sbjct: 622 TCYCIEKDR---KTGEILKINMNRLILCEATAMIMEKSFHLLGIDGVDKM 668


>gi|33519907|ref|NP_878739.1| arginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|39932110|sp|Q7VQX7|SYR_BLOFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33504252|emb|CAD83515.1| arginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 583

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 144/605 (23%), Positives = 248/605 (40%), Gaps = 87/605 (14%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           K  L+ I +++      G    N  + +S+ L +     + + +  I +      +    
Sbjct: 21  KSFLNLIQVQQSNHIRFGDYQINGMINISKHLQIPIKDFSNIFIKTINLKGIAKIIKFEP 80

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN++LSP+++   ++ I+    + G +LI     V I++ S N    MHVGH R  +
Sbjct: 81  PGFINIFLSPTWIENKINHII-DLPKLGIDLIPSKNIV-IDYSSPNIAKEMHVGHLRSTI 138

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD---LPEGYYP 202
           +GD++A +++F G+ V R  +I D G Q   L   +       L  NDS    + E YY 
Sbjct: 139 IGDSIARILSFLGHNVIRSNHIGDWGTQFGMLIAYIKKHKINYLSLNDSQQISMLEYYYQ 198

Query: 203 GVYLKHVG----KELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
               ++       EL+ KY  +L     +  + W  +V D S+    K I D L     +
Sbjct: 199 ESKKEYDSDPNFAELSRKYVVKLQKGDVYCRKIWKYLV-DISISNNQK-IYDRLNVTLKK 256

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            DI + E  +H   P  I D               L   K   T     D   ++F +  
Sbjct: 257 KDI-MGESMYHDMLPYIITD---------------LKNKKLAVTS----DHATIVFLNQN 296

Query: 316 VGDDVDRP----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
                + P    + K DG Y Y   D+A  K + E    D +IY + S    ++ +   +
Sbjct: 297 KNSKKNNPFGVIIQKKDGGYLYSTTDIACIKYRCETLHADRIIYYIDSRQKQHLMQAWEI 356

Query: 371 A--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A  A    K       +C ++ L ++  P K   R+G+ I L  +++E  + +   ++  
Sbjct: 357 AYQAGYITKAVVFEHHVCGML-LDKNKKPFKT--RSGNTIKLITLLNEAFNKAYNLILNK 413

Query: 429 RKNSE---------LLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCR 462
             N E         ++     K  E SK    N +F              Y+QYAY R  
Sbjct: 414 NLNLEYKKINHLAHIISIGAIKYSELSKNRTTNYIFNWDKILNFDGNTAPYIQYAYTRIS 473

Query: 463 SIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           SIF++   +    +  + +F   +  QE      E+ L + L ++   +        P+ 
Sbjct: 474 SIFKKINHRSELQEKKYQIF---LSSQE------EILLAICLLQFHETLITVADRGTPHI 524

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YLY L+++F   + H    P L+  +    K +  RL+L    A I+  GLN++G+E
Sbjct: 525 LCGYLYKLSTLFSLFYEHC---PILK-TECTYTKYS--RLKLSFITAQILKKGLNLLGIE 578

Query: 581 SPNEM 585
           +   M
Sbjct: 579 TSEYM 583


>gi|291515730|emb|CBK64940.1| arginyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 593

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 137/598 (22%), Positives = 241/598 (40%), Gaps = 142/598 (23%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I E + A +   P++ S F   KGF+NL L  ++     + +     E        G  V
Sbjct: 62  IGEYMAANV---PEIAS-FNVIKGFLNLSLDSAFWAARFAEVAAD--ERFGQAPATGRTV 115

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+ S N   P+H+GH R  ++G ++A ++  +G+ V +   +ND G  I    L+  W
Sbjct: 116 MVEYSSPNTNKPLHLGHIRNNLLGYSVAQILKANGHTVIKANLVNDRGIHICKSMLA--W 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK---ELADKYSSELLNF-----PEE---KWLPI 232
           +    LY N          G +L  VGK   E    Y +++        PE+   K  PI
Sbjct: 174 K----LYGNGETPASSGMKGDHL--VGKYYVEFDKHYKAQIRELVAQGQPEDEAKKNAPI 227

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +     Q M++                     +   DP  +  + + +   G+VYEG   
Sbjct: 228 M--LQAQEMLR--------------------KWEARDPE-VYSLWETM--NGWVYEGFDV 262

Query: 293 PPKSKTTQKCDMDR--------------------KQLLFRS-------TMVGDDVD-RPL 324
             K+      D D+                    K + +R         +  D +D + L
Sbjct: 263 TYKA---LGVDFDKVYYESQTYLLGKSLVEEGLKKGVFYRRPDNSVWIDLTADGLDEKLL 319

Query: 325 LKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQI 381
           L+ DG+  Y   DL     ++E    D+MIYV+G++ + + + L+ V   +  ++    I
Sbjct: 320 LRGDGTSVYMTQDLGTAFRRFEDNRLDDMIYVVGNEQNYHFQVLKLVLKKLGYADWSDHI 379

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
             L   +V L       KM  R G  +    +++ + S + R M     ++EL   D C 
Sbjct: 380 THLSYGMVELPEG----KMKSREGTVVDADDLIEGMVS-TAREM-----SAELGKLDGCS 429

Query: 442 VKEQS--------------------KENPVF--------------YVQYAYARCRSIFRQ 467
            +E +                    K+  +F              ++QY +AR RS+ R+
Sbjct: 430 EEEANAVSTMVGLGALKYFILKVDPKKTMLFDPRESIDFNGNTGPFIQYTHARIRSVLRK 489

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A +    +DF           +++   E+ L+  L EYP V+++A     P  +  Y+Y+
Sbjct: 490 AAE--AGIDFG------GAATADYLREEIDLVKSLTEYPSVVKSAGENFAPSVVGAYVYE 541

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  F+G++ H         ++  N  +  MRLQL   VA +I  G+ ++G++ P  M
Sbjct: 542 LAKQFNGYY-HDHS-----ILKEENAGVRTMRLQLAQQVARVIKEGMKLLGIDVPERM 593


>gi|47221361|emb|CAF97279.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 697

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 136/610 (22%), Positives = 244/610 (40%), Gaps = 107/610 (17%)

Query: 49  AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108
           A M+ ++ + ++P  IAE I   +  +  +    IAG GFIN++L  S++ K+LS ++++
Sbjct: 122 AQMLKAKGVKVNPREIAERITRNLPDNELIQKTEIAGPGFINIHLKRSFVSKLLSKLLIN 181

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G++     +    +V ++F S N    MHVGH R  ++GD+++ L  F G++V R  ++ 
Sbjct: 182 GVKPPP--LASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVG 239

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L   +  ++   L    +  P G     Y     KE   ++  +   F +  
Sbjct: 240 DWGTQFGMLIAHLQDKFPDYL---TASPPIGDLQAFY-----KESKKRFDED-EAFKKRA 290

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY 287
           +  +VK  S +       D +KA N+  D  +S  +F +     I D +D  +  +G  Y
Sbjct: 291 YQCVVKLQSKEP------DFIKAWNLICD--VSRQEFQK-----IYDCLDIKIIERGESY 337

Query: 288 -----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                  ++   + +   + D  RK ++F     G  +   ++KSDG YTY  +DLA  +
Sbjct: 338 YQDLMTDVVKEAEDRGFVQLDEGRK-IIFAP---GQSLPLTVVKSDGGYTYDTSDLAALR 393

Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQINVLLCELVRLYR 393
            + +E   D +IYV  S    + + + A A  +          + A   V+L E  RL R
Sbjct: 394 QRLFEEKADTIIYVTDSGQGSHFQVVFAAAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQR 453

Query: 394 DGMPI----------------------------KMSKRAGDFITLRHVVDEVGSDSVRFM 425
               I                            K   R+G+ + L  ++DE    S+  +
Sbjct: 454 SRNRIRHRYPAPTSVLGLRAADVSSALPNLPRKKFKTRSGETVRLMDLLDEGLKRSMDKL 513

Query: 426 MLWRKNSELLDFDFCKVKE-----------------------------QSKENPVFYVQY 456
               ++  L   +  K +                                + N   Y+ Y
Sbjct: 514 KEKERDQVLTADELVKAQRAVALRLHQVRRPFPQPHLTTYVFSFDKMLDDRGNTAAYLLY 573

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIA 515
           A+ R RSI R A     ++D     +     E   +   E +L   +  +P ++      
Sbjct: 574 AFTRIRSIARLA-----NIDEATLRKEAASTEILLEHEKEWKLGKCILRFPEILVKILDD 628

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
              + L  YLY+LA+ F   +       + R       K+ M R+ L  A A+I+    +
Sbjct: 629 LLLHSLCDYLYELATTFTEFYDSCYCVEKDRQT-GEVVKVNMWRMLLCDATAAIMAQCFH 687

Query: 576 IIGVESPNEM 585
           I+G+     M
Sbjct: 688 ILGLNPVERM 697


>gi|113955154|ref|YP_731855.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123327552|sp|Q0I6R7|SYR_SYNS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113882505|gb|ABI47463.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 590

 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 143/606 (23%), Positives = 239/606 (39%), Gaps = 118/606 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV  ++ DP   ++     IAG GFINL + P  L
Sbjct: 40  GDFQANGALPLAKPLKQAPRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERL 99

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +S+  +     G   +     V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 100 AAEVSA-RLGDPRLGVPEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 158

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + V R  ++ D G Q   L                           +LK V  E  ++  
Sbjct: 159 HRVLRLNHVGDWGTQFGMLI-------------------------THLKQVAPETLNRAD 193

Query: 219 S----ELLNFPEEKWLPIVKDYSVQA-----MMKIIRDD---LKALNIQHDIFISEDDFH 266
           +    +L+ F  E      +D + QA     ++K+   D   LKA  +  D   S  +F 
Sbjct: 194 AVDLGDLVAFYREAKKRFDEDEAFQATSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQ 251

Query: 267 RGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVD 321
           +     I D +D  L+ +G  +            ++ D+    D  + +F   + G D  
Sbjct: 252 K-----IYDRLDIRLSERGESFYNPYLASVLSGLKEADLLVTDDGAECVFLEGVNGKD-G 305

Query: 322 RPL----LKSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVAA 372
           +PL     KSDG + Y   DLA  + ++    D      +IYV  +  + +   +  VA 
Sbjct: 306 KPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRVIYVTDAGQANHFAGVFQVAK 365

Query: 373 AVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
             +   +  ++  +   LV+   DG   K+  R+GD + LR ++DE              
Sbjct: 366 RANWIPEHGRLEHVPFGLVQ-GEDGK--KLKTRSGDTVRLRDLLDEAVERAEADLRRRLE 422

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            VG  +V++  L +       F F ++    + N   Y+ YA  
Sbjct: 423 EEGRSEDDQFIEHVAGTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVV 481

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R   I R+  D+  +     F     PQ       E  L+  L ++  VI        P 
Sbjct: 482 RIAGIARKGGDLEAEAGMLQFSE---PQ-------EWSLVRELLKFDAVIAEVEEELLPN 531

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L  YL++L+ VF+  +        +  ++A  + L   RL L    A  + SGL ++G+
Sbjct: 532 RLCSYLFELSQVFNRFYDQ------VPVLKAEGQSLP-SRLALCRLTADTLKSGLGLLGI 584

Query: 580 ESPNEM 585
            +   M
Sbjct: 585 ATLERM 590


>gi|187778219|ref|ZP_02994692.1| hypothetical protein CLOSPO_01811 [Clostridium sporogenes ATCC
           15579]
 gi|187775147|gb|EDU38949.1| hypothetical protein CLOSPO_01811 [Clostridium sporogenes ATCC
           15579]
          Length = 563

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 132/576 (22%), Positives = 250/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YVNFFVDKTVLIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  + +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNIVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KNLEDGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNIPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDTAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +S+ R+A ++  ++D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSVLRKAGELTGEVDY-----SKLESKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAINKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|315185760|gb|EFU19526.1| arginyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 587

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 227/556 (40%), Gaps = 76/556 (13%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE +VAR+  +  V  +  AG G++NL+L   ++   +LS I  +G  YG   + +
Sbjct: 65  PQKIAEEVVARLLPEGAVRKIEGAG-GYVNLFLDREAFALSVLSDIAHAGPGYGAGTLHQ 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +EF   N   P+H+GH R  ++G++++ ++A  G +V +   IND G  I    L
Sbjct: 124 DKRIMVEFSCPNTNKPLHLGHMRNNILGESVSRILASQGADVLKVNLINDRGIHICKSML 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +     +          P+ +    Y+K       D  + E        W     D  V+
Sbjct: 184 AYKKFGEGKTPEEVGKKPDHFVGDFYVKFNEWAKTDSTAEEQARRMLRAWED--GDAEVR 241

Query: 240 AM--------MKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           A+        ++ I    +   I  D I+   D +  G     RD++      G  Y+  
Sbjct: 242 ALWEKMNRWAIEGIEQTYRRTGISFDKIYYESDTYLLG-----RDLVLKGLEDGVFYQ-- 294

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349
               +   +   D+         + +G D  + LL+SDG+  Y   DL     +Y+   F
Sbjct: 295 ----EEDGSVWVDL---------SEIGLD-KKVLLRSDGTSLYLTQDLGTAVARYQDWAF 340

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ---------INV----------------- 383
           D +IYV+ S+ + + + L  V   +    A+         +N+                 
Sbjct: 341 DLLIYVVASEQNYHFRVLFYVLEKLGFSWAKNLYHLSYGMVNLPEGKMKSREGTVVDADD 400

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL  LV + R+   I+   R  +   +    + +   ++ + +L    ++ + F+  K  
Sbjct: 401 LLDRLVEMARE--EIREKGRVDEVEDIDRTAEAIALGALHYFLLQVSPNKDMIFN-PKES 457

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QY  AR  S+ R+A    P L     P   +P     D +  +LIV L+
Sbjct: 458 LSLTGNTGPYLQYMGARICSMERKAD---PSLG---VPVEEVPTAELVDDASWELIVLLS 511

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P V+E+A     P  +  +LY+L   F   +    +NP    +   N+     RL L 
Sbjct: 512 QFPEVVESAAREYNPSLVIGFLYELGKTFSSFY---HDNP---IITHPNKDTARARLALA 565

Query: 564 HAVASIINSGLNIIGV 579
             +  ++ +G  ++ +
Sbjct: 566 RGIRQVLENGFRLVNI 581


>gi|315127467|ref|YP_004069470.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015981|gb|ADT69319.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 580

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 238/582 (40%), Gaps = 77/582 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ +  +P  +A+ I+ ++ +    +   IAG GFIN++L P +L + +
Sbjct: 37  GDYQINGAMGAAKKMKSNPRELAQKIIDQLDVSDIAEKTEIAGPGFINIHLKPEFLAQSV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +   +  +   N   K  KV +++ S N    MHVGH R  ++GD +   + F G  V 
Sbjct: 97  QA-ANNHAKLAVNEHTKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVV 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R+ ++ D G Q   L   +  +  Q +   D D         + +   K   D+      
Sbjct: 156 RQNHMGDWGTQFGMLIAHLEDQINQGV---DLDTVALADLETFYRDAKKRFDDEE----- 207

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            F ++    +VK     A  + +     A +++H    SE+ + R + +      D +A 
Sbjct: 208 GFADKARNYVVKLQGGDAHCEKLWKLFIATSVKH----SEEVYKRLNVTLTP--ADIMAE 261

Query: 283 QGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTYFAAD 337
             Y  E   I+   K K     +    Q++F   +   D +       KS G + Y   D
Sbjct: 262 SAYNSELNDIISLLKDKNI-AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTD 320

Query: 338 LAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYR 393
           LA   C Y     G + ++  + +  S +  ++E  A      + + +   C     +  
Sbjct: 321 LA--ACDYRSNKLGAERILIFVDARQSLHFNQVELTARKAGLLRDETSYEFCPFGTMMGA 378

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------------F 439
           DG P K   R G  + L  +++E  S +     L  + S+L D D              +
Sbjct: 379 DGKPFKT--RTGGTVKLADLLEE--SITRAAAKLAERESDLSDEDRSEIARKVGIGAVKY 434

Query: 440 CKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
             + +    + +F              Y+QYAY R RSIFR++      L  D+    + 
Sbjct: 435 ADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAASLKADV--SIIE 492

Query: 486 PQESEFDTSELQL--IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           PQE       LQL  ++ L     +I  AT    P+ L  YLY+LAS++   +      P
Sbjct: 493 PQEKTLALKLLQLEEVLDL-----MINEAT----PHVLCGYLYELASLYMTFY---EACP 540

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L+  +     +   RL L + VA  + +GL+++G+E   +M
Sbjct: 541 VLK--EGVEPSVRDSRLVLCNLVADTLRTGLDLLGIEVMEQM 580


>gi|126207527|ref|YP_001052752.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165975497|ref|YP_001651090.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|126096319|gb|ABN73147.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165875598|gb|ABY68646.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 548

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 239/582 (41%), Gaps = 82/582 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    ++   D + IAG GFIN++L+ ++L    
Sbjct: 10  GDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLAN-Q 68

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +S  +  + +G       T V I++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 69  ASEALQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 127

Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L A       + A     SDL E +Y         KE  D  S E+
Sbjct: 128 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV 178

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNL 280
             F E+    +VK  S     + +   L  + + H+    ++++ R + +   +D++   
Sbjct: 179 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE- 231

Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334
                +Y  +LP   +    K    + D   ++F        GD +   + K DG + Y 
Sbjct: 232 ----SLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYT 287

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390
             D+A  K +YE    D ++    S  + ++++   +   A  V E  +  +     +  
Sbjct: 288 TTDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM-- 345

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L +DG P K   R+G  + L+ ++DE                           V   SV+
Sbjct: 346 LGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVK 403

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +     
Sbjct: 404 YSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRA-----GIDVNGLNGE 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +   E +    E  L V L ++   +        P  L  YLY+LA  F   +      P
Sbjct: 458 INLTEDK----ERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFY---EACP 510

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L   +     +   RL L    A  +  GL+++G+++  +M
Sbjct: 511 MLNAEE----NVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 548


>gi|154504604|ref|ZP_02041342.1| hypothetical protein RUMGNA_02110 [Ruminococcus gnavus ATCC 29149]
 gi|153795086|gb|EDN77506.1| hypothetical protein RUMGNA_02110 [Ruminococcus gnavus ATCC 29149]
          Length = 587

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 139/603 (23%), Positives = 250/603 (41%), Gaps = 101/603 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA  +VA ++     +       GFINL + P
Sbjct: 33  RPDLCEY---QCNGAMAAAKTYKKAPIMIANDVVAGLQEKDCFEIAEAVNPGFINLKVKP 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+    L+ +  S  + G   +     + +++   N   P+HVGH R A++G+++  ++ 
Sbjct: 90  SFAAAFLNEMAASE-KLGVEEMETPKTIMVDYGGPNVAKPLHVGHLRSAIIGESVKRILR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           + G +V  + ++ D G Q+  +   +  R  +  Y +++    G YP      +G EL +
Sbjct: 149 YKGNKVIGDIHLGDWGYQMGLIITELQKRKPELPYFDENFT--GEYPKEAPFTIG-ELEE 205

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQA-----------------MMKIIRDDLKA----LNI 254
            Y +      E +     ++ ++QA                 +M +   DLK     LN+
Sbjct: 206 IYPTASAYAKEHEEY---REKALQATFLLQNGHPGFRAIWNHIMAVSVADLKKNYANLNV 262

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFR 312
             D++  E D  +  P    D+++ L  +GY +  EG L     + T     D+K++   
Sbjct: 263 SFDLWKGEADAQKYIP----DMVEMLKEKGYAHYDEGALVVDVQEET-----DKKEV--P 311

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA 371
             M+        LKSDG+  Y   DLA    + E    D +IYV+      +  ++   A
Sbjct: 312 PCMI--------LKSDGAALYDTTDLATLVEREELYQPDEVIYVVDKRQELHFVQVFRCA 363

Query: 372 AAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
                 K +  +       +  +DG P K   R G  + L +++ E+  +  + +M  R 
Sbjct: 364 KKTGIVKPETELEFLGFGTMNGKDGKPFKT--REGGVMRLENLIREINEEMYKKIMDNRT 421

Query: 431 NSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIF 465
            SE           L    +  +  Q+ ++ VF              Y+ Y   R +SI 
Sbjct: 422 VSEEEAKKTAQMVGLAAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSIL 481

Query: 466 R--QAKDIFPDLDFDLFPRNVIPQ-ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
              Q ++   DL        VI +  SEF+ +   L++  A++  VIE       P+KL 
Sbjct: 482 NKYQEENSLEDL--------VIREASSEFEKA---LMLECAKFNDVIETVYEETAPHKLC 530

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+YDLA+ F+  +    E   L    A  +K  +  L+L   V   + S ++++G E+P
Sbjct: 531 AYIYDLANAFNKFY---HETKILSEEDAEKKKGYIALLKLTKEV---LESCIDLLGFEAP 584

Query: 583 NEM 585
             M
Sbjct: 585 ERM 587


>gi|331083052|ref|ZP_08332169.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330405054|gb|EGG84591.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 588

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 133/631 (21%), Positives = 260/631 (41%), Gaps = 104/631 (16%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +++  +KE     + ++K     V  RP  C +     N AM  ++     P+ IA  +V
Sbjct: 7   KIEEAVKEAFAASEYDEKFAKVTVSNRPDLCEY---QCNGAMAAAKTYKKAPIMIANSVV 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIE 126
            +++ +   +S      GFINL L+  +L   L+ ++      +E   N       + I+
Sbjct: 64  EKLQDNEMFESAEAVNPGFINLKLNKEFLSGYLNDMLADEKLSVEEAEN----PKTIVID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  R  
Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIITELSKRQP 179

Query: 187 QALYNNDSDLPEGYYPG-----------VYLKHVGKELADK-YSSELLNFPEEKWLPIVK 234
             +Y +++   EG YP            +Y    GK   D+ Y +E L    E  L + K
Sbjct: 180 DLVYFDEN--YEGEYPKEAPFTVSELEEIYPTASGKSKEDEAYKNEAL----EATLQLQK 233

Query: 235 ---DYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               Y    Q +M++   DLK     L +  D++  E D     P+    ++D L   GY
Sbjct: 234 GRRGYRALWQHIMEVSVTDLKKNYAKLKVDFDLWKGEADADAYIPA----MVDYLKENGY 289

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFK 342
            Y                +D+  L+       D  + P   +LKSDG+  Y   DLA   
Sbjct: 290 AY----------------LDQGALVVDVKEETDTKEIPPCMILKSDGASLYNTTDLATIV 333

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + E    D +IYV+      +  ++   A  A + ++  Q++ +    +   +DG P K
Sbjct: 334 QRMEDYKPDEIIYVVDKRQELHFVQVFRCAKKAKLVDENTQLSFVGFGTMN-GKDGKPFK 392

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR----KNSE-------LLDFDFCKVKEQSKE 448
              R G  + L  ++ E+  +  + +   R    +N+E       L    +  +  Q+ +
Sbjct: 393 T--REGGVMRLERLIAEINEEMFKKITENRSVKDENAEKTAQMVGLSAIKYGDLSNQASK 450

Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + VF              Y+ Y   R +SI  +  +   ++D       V       + S
Sbjct: 451 DYVFDIERFTSFEGNTGPYILYTIVRIKSILSRYAESGKNIDKKAMKAAV-------NDS 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++ L+ +  +I  A   + P+++  Y+YDLA+ F+  +         + +   +  
Sbjct: 504 EKALMLELSRFNSIIAPAFEEKAPHRICSYIYDLANAFNSFYHE------TKILSEEDED 557

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + L+     ++ + ++++G ++P+ M
Sbjct: 558 KKASWICLLTLTEKVLETCIDLLGFDAPDRM 588


>gi|195157366|ref|XP_002019567.1| GL12462 [Drosophila persimilis]
 gi|194116158|gb|EDW38201.1| GL12462 [Drosophila persimilis]
          Length = 572

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 202/508 (39%), Gaps = 95/508 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V 
Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------E 227
               Q    +D D+       +Y  +V    A + + E+                    +
Sbjct: 174 ----QLTNVSDKDMQRAPIETLYRSYVAANKAAEENPEIAQRARDLFTALEAGTDDAMAQ 229

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W    + Y+ + +  +       L +  D +  E  + +     I ++++ L   G + 
Sbjct: 230 QWQQ-YRQYTTEELSGVY----NRLGVHFDSYEWESQYSQ---QQISEVLEKLRSAGLL- 280

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                             ++++  R  +V DD   P++KSDGS  Y A D+A    ++ R
Sbjct: 281 ------------------QREVDGREIVVVDDRRIPVIKSDGSTLYLARDIAALLERHSR 322

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             F  ++YV+ +  + +   L    AA+ ++      L  E ++  + G    MS R G 
Sbjct: 323 LQFSRILYVVDNGQADHFNALFKTTAALDKR------LSLEQLKHVKFGRIHGMSTRQGK 376

Query: 407 FITLRHVVDEVGSDSVRFMMLW----RKNSELLDFDFCKV-----------KEQSKENPV 451
            I LR V+DE   D +R   +     R NS L D D C +           K++ + +  
Sbjct: 377 AIFLRDVLDE-ARDVMREKRIQTQTTRSNSSLDDEDVCDILGVSAVLVNVLKQRRQRDHE 435

Query: 452 FYVQYA------------YARCR--SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           F  Q+A            Y  CR  S+ +  KDI  DL+ D+ P       S+     L 
Sbjct: 436 FSWQHALQVNGDTGIKLQYTHCRLHSLLQNFKDI--DLE-DIRPD--WQHYSQEPVDALD 490

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LA + + I  +    E   L  YL+ L +      +  R   RL   Q +      
Sbjct: 491 LLYELARFDQSIWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQESCPLKQS 544

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L  A    +  G+ ++G+   N+M
Sbjct: 545 QRLLLFQAAKRTLQQGMQLLGLRPLNQM 572


>gi|149182270|ref|ZP_01860750.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850039|gb|EDL64209.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 600

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 254/615 (41%), Gaps = 103/615 (16%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N L+E       +++IL+  VIE P+    G LS      L++     P  IA  + A +
Sbjct: 47  NLLEEYLSGDMTKEEILE--VIETPKFTHQGDLSF-PCFQLAKKKKQAPTVIASELAASL 103

Query: 73  KIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                + +   A   ++N++    +   +I+ +I+  G  YG    G+G  + I+  S N
Sbjct: 104 SHSYLLKAE--AAGPYVNIFFDGKTTGTEIMKNILAQGDHYGELSFGEGKVITIDMSSPN 161

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P  +GH R  V+G+++A L    G+E  +  YI D G Q   L ++ + ++      
Sbjct: 162 IAKPFSMGHLRSTVIGNSIALLAEKCGFETVKINYIGDWGTQFGKL-ITAYKKWGDEEKV 220

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---VQAMMKIIRDD 248
             + +PE +   +Y K   +  AD      LN    K   +++D     V+       + 
Sbjct: 221 KANPIPELF--SLYKKFHEEAEADP----ALNDEGRKAFKLLEDGDSEVVELWTWFKNES 274

Query: 249 LKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           LKA    +D+  IS D +H    S   D ++  A +    +G+L    S   +   +D K
Sbjct: 275 LKAFQEIYDLLGISFDSYH--GESFYNDKME-AAVKLIKEKGLLET--SDGAEVVWLDDK 329

Query: 308 QLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSG 362
            L             P L  KSDG+  Y   D++   Y K  Y+  F   +YV+G + + 
Sbjct: 330 GL------------PPSLIKKSDGATLYATRDISAALYRKKTYD--FSQALYVVGQEQTI 375

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           + +++ AV   +    A+  V +     L+  G   KMS R G  I L  V+ E      
Sbjct: 376 HFRQVFAVLEKLGMPWAEQMVHIP--FGLFLQGGK-KMSTRKGRVILLEEVLKEAIDMAL 432

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYV 454
                              VG+ +V F  L  KN  + D +F     +  + +  P  YV
Sbjct: 433 ANIKEKNPNLENAEETARWVGTGAVIFHDL--KNDRMNDIEFSLEDMLTFEGETGP--YV 488

Query: 455 QYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           QY  AR +SI R A     + F  LD               D    +LI  L +YP +I+
Sbjct: 489 QYTNARAQSILRNAAAQELNHFTGLD---------------DHESWELIKILNKYPEIIQ 533

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P  LA Y+  ++  F+ ++   R       +   N  L   RL LV  V  I+
Sbjct: 534 EAYETYSPSVLAKYILAVSKAFNKYYGKTR-------ILEENVALA-SRLVLVKTVKDIL 585

Query: 571 NSGLNIIGVESPNEM 585
           + GL ++G+++P +M
Sbjct: 586 SDGLGLLGIKAPQQM 600


>gi|330501487|ref|YP_004378356.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328915773|gb|AEB56604.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 579

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 3/170 (1%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +AE ++A +  D  +  V IAG GF+N 
Sbjct: 30  IQVENTKDKSHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQITKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L + L + +    + G    G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNSDVLAQHLEAALADA-KLGVRKSGPTQRVVVDMSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
            ++ F G  V R+ ++ D G Q   L L+       A  +  +DL EG+Y
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML-LAYMQENPAAAESELADL-EGFY 196



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +   VG  SV++  L +  +    F+F  +    + N   Y+ YAY R  SIFR+  
Sbjct: 420 LRQIARVVGIASVKYADLSKHRTSDYSFNF-DLMLSFEGNTAPYLLYAYTRVASIFRK-- 476

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +   +D       +  Q +     E  L   LA++  ++ N      P+ L  YLYD+A
Sbjct: 477 -LGKGVD------EIGGQITLVADQEQALAGKLAQFNELLGNVADKGTPHMLCAYLYDIA 529

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +            N RLR      R L
Sbjct: 530 GLFSSFYENCPILAAEDEATRNSRLRLAALTGRTL 564


>gi|322383445|ref|ZP_08057225.1| arginyl-tRNA synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152246|gb|EFX45072.1| arginyl-tRNA synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 567

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 128/546 (23%), Positives = 232/546 (42%), Gaps = 93/546 (17%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGI---EYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           A   +INL+ +PS    +   +++ G+   E+G+  +G+G +V I+  S N   P  +GH
Sbjct: 71  AAGPYINLFFTPS----VYGDLLLQGMMNPEFGKPDLGQGKRVIIDMSSPNIAKPFGIGH 126

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEG 199
            R  V+G+ L +L   +G+E     ++ D G Q    +     W  ++ L  +       
Sbjct: 127 LRSTVIGNALYNLYKETGFEPVSVNHLGDWGTQFGKQICAYKHWGSEEKLKADPI----- 181

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-QHDI 258
                       EL  ++  E   +PE      ++D +     K+   D  A  + ++ +
Sbjct: 182 --------RESLELYVRFHEEAEQYPE------LEDEARGWFRKLETGDEDAKRLWEYFV 227

Query: 259 FISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +S ++F R  D   ++   D+   + +  + I+P  K+   Q   ++     +   +  
Sbjct: 228 KVSLNEFERMYDKLGVK--FDHTLGESFYNDKIVPVIKALKEQNL-LEESDGAYVVRL-- 282

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVAA 372
           D+   P   + KSDG+  Y   DLA    +++  +G D ++YV+G +   + K++ AV  
Sbjct: 283 DEEGMPPCLITKSDGTTIYPTRDLATAIYRHDVMKG-DKLLYVVGGEQKLHFKQVFAVLG 341

Query: 373 AVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLR-------------------- 411
               K  +  V  CE V          KMS R G  ++L                     
Sbjct: 342 ----KLGKTWVESCEHVPFGLMKFAGKKMSTRRGRVVSLEEVLQEAVNRAREIIEEKNPL 397

Query: 412 -----HVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                HV + VG  ++ F  L  KN+ + + DF     +    +  P  YVQY +AR +S
Sbjct: 398 LPDKEHVAEAVGIGAIVFGDL--KNNRVNEIDFSLDEALNFDGETGP--YVQYTFARTQS 453

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPY 519
           +  +A     + +F L     I   S+ ++    S  QLI  L+ YP+ IE A    EP 
Sbjct: 454 VLAKA-----EWNFSLADCKNILSHSDLNSINHSSVWQLIKQLSLYPQAIERAVKRNEPS 508

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y  + A  F+  ++  R       + A + K    +L +  A A II   L+++G+
Sbjct: 509 VVARYALETAKAFNRFYNLNR-------ILAEDEKEQKAKLIVTTAAAEIIRRSLHLLGL 561

Query: 580 ESPNEM 585
           ++P +M
Sbjct: 562 KTPKQM 567


>gi|119719478|ref|YP_919973.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524598|gb|ABL77970.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 635

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 146/607 (24%), Positives = 243/607 (40%), Gaps = 165/607 (27%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+NL +    Y   + SS+V  G  YG        ++ +E VSANP  P+HVGH R  V+
Sbjct: 85  FLNLVVDEKRYAEVVYSSVVRLGDNYGFVPAETRERIIVEHVSANPIHPLHVGHLRNGVL 144

Query: 147 GDTLASLMAFSGYEVT-----------------------------REYYINDAGAQINTL 177
           GD+L  L+   G+EV                              +++++      IN L
Sbjct: 145 GDSLVRLLRARGHEVKAHFYVDDVGLQVAYAAKAFSIVGGEGQGKKDHFVGTLYTAINLL 204

Query: 178 ALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            + V    ++A   +  +L E       YL  +G EL++K+   +    E  W+   +D 
Sbjct: 205 -IEVKKLREKAKSASGDELAEINSKVSEYLWRLG-ELSEKFPGLIEKLLE--WVEKTEDP 260

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP--------------IRDIIDNLAR 282
             +         L+ LN  ++          GDPS               IR+ +D L  
Sbjct: 261 EAE---------LRRLNRMYE---------EGDPSTVKLTRRVLDYCLEGIRETLDRLGI 302

Query: 283 Q--GYVYEGILPPPKSKTTQKCD-------MDRKQ--LLFRSTMVGD--DVDRP------ 323
               + +E  L      T+   D       ++R+   L+FR+ ++ +  DV R       
Sbjct: 303 SFDSWDWESELTVWSGATSDVIDKLRGLGLVERRDGALVFRADLLAESEDVRRAAGIPPG 362

Query: 324 -------LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                  L++SDG+  Y   D+AY   K  R  D +I V+                AV +
Sbjct: 363 FTVTPMTLVRSDGTTLYTTRDIAYSIWKLSRA-DRVINVI----------------AVQQ 405

Query: 377 KKAQINVLLCELVRLYRD-------------GMP-IKMSKRAGDFITLRHVVDE------ 416
             AQ  + L      YRD              +P  +MS R G +++   V++E      
Sbjct: 406 TLAQAQLRLALYALGYRDVGRRLIHYSYEMVNLPGTRMSSRRGVYVSADEVIEEAVARAK 465

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           VG  +++F  L +   ++L FD+ +V +  ++N   +VQY+Y R
Sbjct: 466 EEIAKRGVGDVGDAEKVGIGALKFFFLSQTPGKVLTFDWKRVLD-FEQNSGPFVQYSYVR 524

Query: 461 CRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
              I R+A +  I PD        NV     +    E  LI+ + E+P V++ A     P
Sbjct: 525 ALGILRKASEEHIRPD------ELNV----GDVGEEEHPLILLVGEFPNVVKEAADNLRP 574

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             LA YL  LA+ F+ ++      P LR     ++K +  RL +V  V   + +G+ ++G
Sbjct: 575 DLLASYLNTLATEFNRYYDS---YPVLR-APTTSKKYS--RLAVVKMVEQTLKNGMKLLG 628

Query: 579 VESPNEM 585
           +E+P  M
Sbjct: 629 IEAPQRM 635


>gi|119468958|ref|ZP_01611983.1| arginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119447610|gb|EAW28877.1| arginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 580

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 235/583 (40%), Gaps = 79/583 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ +  +P  +A+ I+  + +    +   IAG GFIN++L P +L K +
Sbjct: 37  GDYQINGAMGAAKKMKSNPRELAQKIIDNLDVTDIAEKTEIAGPGFINIHLKPEFLAKSV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +   S  +   N       V +++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 97  EA-ANSDAKLAVNEHANPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAIVRALEFRGDKVI 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL 221
           R+ ++ D G Q   L                + L +    GV L+ V   +L   Y    
Sbjct: 156 RQNHMGDWGTQFGMLI---------------AHLEDQISQGVDLESVALADLETFYRDAK 200

Query: 222 LNF-PEEKWLPIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             F  EE +    +DY V+        + L  L I   +  SE+ + R + +  +   D 
Sbjct: 201 KRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQ--ADI 258

Query: 280 LARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTYF 334
           +A   Y  E   I+   K K     +    Q++F   +   D +       KS G + Y 
Sbjct: 259 MAESAYNSELNDIISLLKDKNI-AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYA 317

Query: 335 AADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390
             DLA   C Y     G + ++  + +  S +  ++E  A      + + +   C     
Sbjct: 318 TTDLA--ACDYRSNKLGAERILIFVDARQSLHFNQVELTARKAGLLRDETSYEFCPFGTM 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------ 438
           +  DG P K   R G  + L  +++E  S S     L  + S+L D +            
Sbjct: 376 MGADGKPFKT--RTGGTVKLADLLEE--SISRAATKLAERESDLSDHERSEIARKVGIGA 431

Query: 439 --FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
             +  + +    + +F              Y+QYAY R RSIFR++      L+ D+   
Sbjct: 432 VKYADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAASLNADVAIA 491

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
              PQE       LQL   L     +I  AT    P+ L  YLY+LAS++   +      
Sbjct: 492 E--PQEKALALKLLQLEEVL---DLMISEAT----PHVLCGYLYELASLYMTFY---EAC 539

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L+  +     +   RL L + VA  + +GL+++G+E   +M
Sbjct: 540 PVLK--EGVEPSVRDSRLVLCNLVADTLKTGLDLLGIEVMEQM 580


>gi|150003650|ref|YP_001298394.1| arginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254881121|ref|ZP_05253831.1| arginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319640128|ref|ZP_07994855.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166232757|sp|A6KZA8|SYR_BACV8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149932074|gb|ABR38772.1| arginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254833914|gb|EET14223.1| arginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317388406|gb|EFV69258.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 606

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 134/587 (22%), Positives = 234/587 (39%), Gaps = 129/587 (21%)

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSAN 131
           P++ S + A KGF+NL ++     ++L+SI  +  EYG   I K T+    V IE+ S N
Sbjct: 72  PELVSAYNAVKGFLNLTIASDCWIELLNSIQAAP-EYG---IEKATENSPLVMIEYSSPN 127

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P+H+GH R  ++G+ LA++MA +G +V +   +ND G  I    L+  W     L  
Sbjct: 128 TNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKY 180

Query: 192 NDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE------------ 226
            + + PE          G Y   + KH     KEL  +Y +E LN  E            
Sbjct: 181 GNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAEANSPLM 240

Query: 227 -------EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDP 270
                   KW     D  ++A+ K + D          K + +  D I+   + +  G  
Sbjct: 241 LEAREMLRKWE--ANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESNTYLEGKE 298

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  +      +G+ Y       K   +   D+         T  G D  + LL+ DG+
Sbjct: 299 KVMEGL-----EKGFFYR------KEDNSVWADL---------TAEGLD-HKLLLRGDGT 337

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             Y   D+   K +++    + MIYV+G++ + + + L  +   +  +  +  V     +
Sbjct: 338 SVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGM 397

Query: 390 RLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLD--------- 436
               +G   KM  R G  +     +  +++     S     L     E  D         
Sbjct: 398 VELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIVGLG 454

Query: 437 -FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKD---IFPDLDFD 478
              +  +K  +++N  F              ++QY YAR +S+ R+A +   + P+    
Sbjct: 455 ALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVIPE---- 510

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +IP   E    E  LI  LA++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 511 -----IIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYHD 565

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  L + RL L   V  I+ + + ++G+E P  M
Sbjct: 566 ------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606


>gi|199598041|ref|ZP_03211465.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199591131|gb|EDY99213.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 560

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 142/589 (24%), Positives = 247/589 (41%), Gaps = 91/589 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+    G  +      L++ L   P  IA  +VA+I   P  + V   G G++N Y
Sbjct: 27  LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIASDLVAKIDASP-FEQVKAVG-GYVNFY 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   S+  ++L +I  SG  +G   +G+G  V I+  S N   PM +GH R  V+G+ LA
Sbjct: 84  LDKISFAHEVLKAIAQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209
           +++   GY   +  ++ D G Q   L ++      +A    D   +L + Y     +   
Sbjct: 143 NILQKVGYSPIKINHLGDWGTQFGKLIVAYKKWGSEADVKADPIKNLLQYYVKFHEVAET 202

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFH 266
             EL D+  +         W   ++D   +A  + +  R   L   N  + I   + D +
Sbjct: 203 DPELEDEARA---------WFKRLEDGDKEAITLWRWFRTVSLAEFNRIYKILGVDFDSY 253

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            G+ +   D +D++ +     E       S+  +  D+ +  L           +  L+K
Sbjct: 254 NGE-AFYNDKMDSVVK---TLEDKHLLKTSQGAEIVDLSKYNL-----------NPALIK 298

Query: 327 SDGSYT-YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
                T Y   DLA    + E   F   +YV+G++   + ++L+AV   +  + A  ++ 
Sbjct: 299 KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYEWAN-DIH 357

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGS 419
                 +  +G   K+S R G+ I L  V+                          EVG 
Sbjct: 358 HIPFGLITANGK--KLSTRRGNIILLEKVLKDAVGLAQQQIDEKHPDLPNAEKVAHEVGV 415

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI R+A  I P   
Sbjct: 416 GAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARAHSILRKAS-IAP--- 467

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                    P+ +  D +   ++  L +YP ++  A    EP  +A Y   LA  F+ ++
Sbjct: 468 --------APEVALSDPAAWDVLRALGDYPSIVVRAAKEYEPSVIAKYALRLAKAFNKYY 519

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +       V   + +L   RL +V A   ++ + L+++GV +P EM
Sbjct: 520 ANVK-------VLVEDSELP-ARLAMVAATTQVLENALHLLGVAAPEEM 560


>gi|328698469|ref|XP_001949420.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
           pisum]
          Length = 592

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 135/590 (22%), Positives = 253/590 (42%), Gaps = 102/590 (17%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKID-----PDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA+M + + L      ++  +VA+  +D       ++ V ++G+GFIN++LS + LR IL
Sbjct: 53  NASMQICKLLKAKGENVSPNVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDIL 112

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++ + ++     +    K+ ++F + N    MHVGH R  ++G++L+ +  F G++V 
Sbjct: 113 QYVLENKLK--PKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVL 170

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  +I D G Q   L   +    Q    N  ++ P    P   L+   K+    + S+ L
Sbjct: 171 RINHIGDWGTQFGMLIALL----QDKFPNYKTESP----PIKDLQQFYKQSKVLFDSD-L 221

Query: 223 NFPEEKWLPIVKDYS-----VQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            F +  +  +VK  S     VQA   +  + R + + +  + +I I E    RG+    S
Sbjct: 222 EFKKRAYDCVVKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIE----RGESFYQS 277

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  ++ +L  +G++                  D +++++        +   ++KSDG +
Sbjct: 278 RMETVVKDLEEKGFLEND---------------DGRKIMWSPE---SSIPLTVVKSDGGF 319

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCE 387
           TY  +D+A  K +  E   D +IYV+ +  S + + L+  A     +   K +++ +   
Sbjct: 320 TYDTSDIATLKQRIEEEKADWIIYVVDAGQSLHFETLKKCAIHSGFLDPSKVRMDFVGFG 379

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS- 446
           +V L  D    K   R+GD + L  ++DE G    R  ++ +   ++L  +  K+ E + 
Sbjct: 380 VV-LGEDKK--KFKTRSGDTVRLASLLDE-GIKRTRDKLVEKGRDKVLTDEELKLAETAL 435

Query: 447 ----------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
                                       K N   Y+ YA  R RSI         DL+  
Sbjct: 436 AYGCIKYADLCHNRNHDYVFSFDKMLDDKGNTAVYLLYALTRIRSIINNLGTYTQDLNE- 494

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                  P   + D  E +L   L  +P VI   T     + L  YLYD+A+ F   + +
Sbjct: 495 -------PISLDHD-KEWKLAKTLLRFPEVISKITDDFCLHHLCEYLYDVATTFSEFYDN 546

Query: 539 G---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +NP+   +     K+   R+ L    A  + +GLN++G+ + + M
Sbjct: 547 CYCIEKNPQTGEIV----KVFTGRILLCKVTAEYMETGLNLLGISTVSRM 592


>gi|226948350|ref|YP_002803441.1| arginine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254782953|sp|C1FK28|SYR_CLOBJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226843718|gb|ACO86384.1| arginine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 563

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|167036128|ref|YP_001671359.1| arginyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083542|sp|B0KN43|SYR_PSEPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166862616|gb|ABZ01024.1| arginyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 578

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++  +    D+  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L + +      G    G   KV I+  + N    MHVGH R  ++GD++A
Sbjct: 90  FQNTDALANRLDAALADA-RLGVRKAGPSEKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LRH+ + VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  FD    N++ Q +     E  L   LA++  ++ N      P+ L  YLYDLA
Sbjct: 478 K-----GFDEVEGNIVLQAAH----EQDLAARLAQFGEILNNVADKGTPHVLCSYLYDLA 528

Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +F   + +          ++  RLR      R L
Sbjct: 529 GLFSSFYENCPILAAETLEQQQSRLRLAALTGRTL 563


>gi|226509531|ref|NP_001141350.1| hypothetical protein LOC100273441 [Zea mays]
 gi|194704118|gb|ACF86143.1| unknown [Zea mays]
          Length = 604

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 128/591 (21%), Positives = 230/591 (38%), Gaps = 141/591 (23%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  I + I   +     ++S  +AG GF+N+ LS  ++ + +  ++V+GI+    ++  
Sbjct: 78  NPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPV 137

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178
              V I+F S N    MHVGH R  ++GDTLA +  FS  +V R  ++ D G Q   L  
Sbjct: 138 KRAV-IDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIE 196

Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                              L +F++  +  ++ND +       GV     G+E   +Y  
Sbjct: 197 YLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDNDPEFKARAQQGVVRLQGGEE---RY-- 251

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                  E W  I           I R +   +  + ++ + E      +P  I  +++ 
Sbjct: 252 ------REAWKKIC---------DISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEE 295

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L+ +G + E                +  +++F   + G  +   ++KSDG + Y + DLA
Sbjct: 296 LSSKGLIKES---------------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLA 337

Query: 340 --YFKCKYERGFDNMIY-----------------------------------------VM 356
             +++   E+  + +IY                                         V+
Sbjct: 338 ALWYRLNVEQA-EWIIYVTDVGQQQHFDMFFSAAKMAGWLPGPNEKKFPKTSHVGFGLVL 396

Query: 357 GSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           GSD   +       V+ +E +  A S  K+++      L RL  +G  +  +        
Sbjct: 397 GSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL------LQRLTENGKIVDWTDEE----- 445

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468
           L    + VG  +V++  L  KN+ L ++ F   +  S K N   Y+QYA+AR  SI R++
Sbjct: 446 LEQTSEAVGYGAVKYADL--KNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKS 503

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                DL          P E         L ++L  +  V+E A     P  +  YLY+L
Sbjct: 504 NKDVEDLKMTGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVVCEYLYNL 556

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +F   +++          Q         RL L  A A ++    N++G+
Sbjct: 557 SEMFTKFYTN---------CQVVGSPEETSRLLLCQATAVVMRQCFNLLGI 598


>gi|168182924|ref|ZP_02617588.1| arginine--tRNA ligase [Clostridium botulinum Bf]
 gi|182674025|gb|EDT85986.1| arginine--tRNA ligase [Clostridium botulinum Bf]
          Length = 563

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|159475080|ref|XP_001695651.1| hypothetical protein CHLREDRAFT_119290 [Chlamydomonas reinhardtii]
 gi|158275662|gb|EDP01438.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 589

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 127/562 (22%), Positives = 219/562 (38%), Gaps = 87/562 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I+A +  +  +    +AG GFIN+ L+   L + + S++  G+         G
Sbjct: 68  PRDVANAILAALPANDLISETSLAGPGFINIRLNKDALARRVGSMLTDGLAKFAPEGHAG 127

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV I+F S N    MHVGH R  ++GDTL  +  + G +V R  ++ D G Q   L   
Sbjct: 128 KKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVLRLNHVGDWGTQFGMLIEH 187

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +    + D D+               +L + Y +    F EE+     K  + +A
Sbjct: 188 MADTRKARDADKDEDVA--------------DLQELYRAAKKRFDEEEEF---KTRAREA 230

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKT 298
           + ++   D  +L     I  +         + +   +       Y  + +GI+   K   
Sbjct: 231 VTRLQSGDATSLASWQRICAASRREFEALYTRLGVTLQERGESFYNPMLKGIVDGLKETG 290

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
               D D    +F   + G  V   + KSDG + Y + D+A    +  E   D +IYV  
Sbjct: 291 VATID-DGATCVF---VEGQSVPLIVQKSDGGFGYASTDMAALHHRLNEEKADWIIYVTD 346

Query: 358 SDHS-------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
              S       G  K+   +  A   K + +   L     L  DG   +   R+GD + L
Sbjct: 347 VGQSQHFELVFGAAKKAGWLKEAAGPKVSHVGFGLV----LGEDGK--RFRTRSGDLVRL 400

Query: 411 RHVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             ++DE                               +G  +V++  L    +    F F
Sbjct: 401 VELLDEAKSRCAATIRERRQEAGEEIVEAEVEEAACAMGYGAVKYADLKNHRTTNYKFSF 460

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +    K N   Y+ YA+AR   I R+  KD++      L     +  E      EL+L
Sbjct: 461 DDML-NLKGNTAVYLLYAHARIAGIVRKGGKDVYA-----LAASTPVTLEH---PKELEL 511

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +HL + P  +E+A     P ++  YLYDL+  F+  +   +       V  + ++ +  
Sbjct: 512 ALHLTKLPEALEDAIEELAPNRITDYLYDLSEKFNSFYVDCK-------VLGSEQEAS-- 562

Query: 559 RLQLVHAVASIINSGLNIIGVE 580
           RL LV A A ++     ++G++
Sbjct: 563 RLLLVEATAVVMRKCFELLGIK 584


>gi|319424887|gb|ADV52961.1| arginyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 581

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAFVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++ S L + L +  V+    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFINDSALAEQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           + NV   ELVR     M         D  TL  +   VG  +V++  L +  +    F F
Sbjct: 402 EANVRALELVRSKNPDM---------DEETLAEIARVVGISAVKYADLSKNRTSDYIFSF 452

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+ YAY R   IF++   +  DL      + V+  E E D       
Sbjct: 453 EQML-SFEGNTAPYLLYAYTRIAGIFKRVTGL--DLSQ---AKIVLEHEKEKDLGN---- 502

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++  ++       +P+ L  YLY+LA  F   +      P L    A+N +    R
Sbjct: 503 -KLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDEQKNSR 555

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L    A  +  GLN++G+E+   M
Sbjct: 556 LLLSQLTARTLQKGLNLLGIETLERM 581


>gi|53729104|ref|ZP_00134063.2| COG0018: Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 575

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 238/582 (40%), Gaps = 82/582 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    ++   D + IAG GFIN++L+ ++L    
Sbjct: 37  GDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLAN-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +S  +  + +G       T V I++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 96  ASEALQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 154

Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L A       + A     SDL E +Y         KE  D  S E+
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV 205

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNL 280
             F E+    +VK  S     + +   L  + + H+    ++++ R + +   +D++   
Sbjct: 206 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE- 258

Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334
                +Y  +LP   +    K    + D   ++F        GD +   + K DG + Y 
Sbjct: 259 ----SLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390
             D+A  K +YE    D ++    S  + ++++   +   A  V E  +  +     +  
Sbjct: 315 TTDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM-- 372

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L +DG P K   R+G  + L+ ++DE                           V   SV+
Sbjct: 373 LGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +     
Sbjct: 431 YSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRA-----GIDVNGLNGE 484

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +   E +    E  L V L ++   +        P  L  YLY+LA  F   +      P
Sbjct: 485 INLTEDK----ERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFY---EACP 537

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L         +   RL L    A  +  GL+++G+++  +M
Sbjct: 538 MLNA----EENVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 575


>gi|225574920|ref|ZP_03783530.1| hypothetical protein RUMHYD_02999 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037888|gb|EEG48134.1| hypothetical protein RUMHYD_02999 [Blautia hydrogenotrophica DSM
           10507]
          Length = 588

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 129/610 (21%), Positives = 256/610 (41%), Gaps = 108/610 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK-GFINL 91
           V  RP  C +     N AM  ++     P+ IA+ +V ++  D  V S+  A K GFINL
Sbjct: 30  VSNRPDLCEY---QCNGAMAGAKAYHKAPIVIAQDVVEKLS-DSQVFSMAEAVKPGFINL 85

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +  ++L   L  +  + +  G         + I++   N   P+HVGH R A++G+++ 
Sbjct: 86  KIKETFLSGYLQKMHTAQL-LGAEKTQNPKTIIIDYGGPNVAKPLHVGHLRSAIIGESIK 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP------E 198
            +  F G+E+  + ++ D G Q+  +   +  R  + +Y ++S       + P      E
Sbjct: 145 RMGRFLGHEMIGDVHLGDWGLQMGLIITELKHRQPELVYFDESYEGEYPKEAPFTIGELE 204

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK----ALNI 254
             YP    K  G E   + + E  +  ++     +  ++   +M++   DLK     LN+
Sbjct: 205 EIYPAASAKSKGDESFREEALEATHLLQQGRPGYMALWN--HIMRVSVTDLKKNYEKLNV 262

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D++  E D     P+    +++ +  +GY Y                MD+  L+    
Sbjct: 263 TFDLWKKESDAQPYIPA----MVEEMREKGYAY----------------MDQGALVVDVK 302

Query: 315 MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEA 369
              D  + P   +LKSDG+  Y   DLA    + E+ F  D ++YV+        KR E 
Sbjct: 303 EETDTKEVPPCMILKSDGASLYTTTDLATI-VEREKLFHPDEILYVVD-------KRQEM 354

Query: 370 VAAAVSEKKAQINVLLCELVRLY---------RDGMPIKMSKRAGDFITLRHVVDEVGSD 420
               V  + A+   LL +  +L          +DG P K   R G  + L H+++++  +
Sbjct: 355 HFVQVF-RCAKKTGLLPQETKLSFLGFGTMNGKDGKPFKT--REGGVMRLEHLIEDINEE 411

Query: 421 SVRFMML--------WRKNSELLDFDFCK---VKEQSKENPVF--------------YVQ 455
               ++          R+ ++++     K   +  Q+ ++ +F              Y+ 
Sbjct: 412 MFHKIVENRSVKDKDARQTAQIVGLSAIKYGDLSNQATKDYIFDIDRFTSFEGNTGPYIL 471

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y   R +SI  +    +   + D     ++   +E   SE  L++ L  +P V+E A   
Sbjct: 472 YTIVRIKSILNR----YEQENKDTENGEILEAANE---SEKVLMLALTGFPAVVEGAFEE 524

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           + P+K+  Y+Y+LA+ F+  +         + +   + +     +Q++     ++ + ++
Sbjct: 525 KAPHKVCSYIYELANAFNRFYH------ETKILSEEDERQKASWIQVLLLTRKVLETSID 578

Query: 576 IIGVESPNEM 585
           ++G  +P  M
Sbjct: 579 LLGFSAPERM 588


>gi|190149308|ref|YP_001967833.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250518|ref|ZP_07336715.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303251862|ref|ZP_07338033.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307244840|ref|ZP_07526939.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307247015|ref|ZP_07529069.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307249238|ref|ZP_07531235.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307251560|ref|ZP_07533467.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253794|ref|ZP_07535648.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256060|ref|ZP_07537848.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307258250|ref|ZP_07539993.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|307260491|ref|ZP_07542185.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307262621|ref|ZP_07544251.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189914439|gb|ACE60691.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|302649292|gb|EFL79477.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302650506|gb|EFL80665.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306854285|gb|EFM86491.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306856467|gb|EFM88616.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306858762|gb|EFM90821.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306861024|gb|EFM93030.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306863278|gb|EFM95218.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865482|gb|EFM97377.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306867710|gb|EFM99555.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306869803|gb|EFN01586.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306872044|gb|EFN03758.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 575

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 238/582 (40%), Gaps = 82/582 (14%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM  ++ LG++P   A+ I+    ++   D + IAG GFIN++L+ ++L    
Sbjct: 37  GDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLAN-Q 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +S  +  + +G       T V I++ S N    MHVGH R  ++GD +   + F G +V 
Sbjct: 96  ASEALQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 154

Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           R  ++ D G Q   L A       + A     SDL E +Y         KE  D  S E+
Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV 205

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNL 280
             F E+    +VK  S     + +   L  + + H+    ++++ R + +   +D++   
Sbjct: 206 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE- 258

Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334
                +Y  +LP   +    K    + D   ++F        GD +   + K DG + Y 
Sbjct: 259 ----SLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYT 314

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390
             D+A  K +YE    D ++    S  + ++++   +   A  V E  +  +     +  
Sbjct: 315 TTDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM-- 372

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L +DG P K   R+G  + L+ ++DE                           V   SV+
Sbjct: 373 LGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVK 430

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +     
Sbjct: 431 YSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRA-----GIDVNGLNGE 484

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +   E +    E  L V L ++   +        P  L  YLY+LA  F   +      P
Sbjct: 485 INLTEDK----ERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFY---EACP 537

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L         +   RL L    A  +  GL+++G+++  +M
Sbjct: 538 MLNA----EENVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 575


>gi|229819128|ref|YP_002880654.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565041|gb|ACQ78892.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 593

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 236/594 (39%), Gaps = 104/594 (17%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKID---PDVDS-VFIAGKGFINLYLSPSYLRK 100
           +  NAA+ L++ +G  P  +A  +VA +  D    DV + V ++G GF+N+ L   ++  
Sbjct: 51  VQVNAALALAKQVGAPPRDVATRLVAALDADGAFADVAAKVEVSGPGFLNITLRDDWIAA 110

Query: 101 ILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            +      G + G    G  T     V I++ + N    MHVGH R  VVGD LA  +  
Sbjct: 111 QV------GAQAGDPRRGLPTPEPQVVPIDYSAPNVAKEMHVGHLRTTVVGDALARTLEA 164

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL-------PEGYYPGVYLKHV 209
            G+ V R+ +I D G     L   +           DSD        P  +Y     K  
Sbjct: 165 LGHRVVRQNHIGDWGTPFGMLIEHLLE------VGEDSDAARLLETDPNTFYQAARAKFD 218

Query: 210 GKE--LADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
            +E   A +  + +  L   +E  L I +      M+++ +     +    D+ + ++  
Sbjct: 219 AEEGDFATRSRARVVALQGGDEATLAIWRR-----MIELSKHYFNRIYTTLDVTLRDEHL 273

Query: 266 HRG---DPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DD 319
                 DP  +  I D L  +G   V +G L          C       +F     G D 
Sbjct: 274 AGESTYDPM-LEGICDELEAKGLAVVSQGAL----------C-------VFPPGFTGRDG 315

Query: 320 VDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------VKRLEAV 370
              PL+  KSDG Y Y   DLA  K + +    D ++YV+G+    +      V RL   
Sbjct: 316 TPLPLIIRKSDGGYGYATTDLATIKHRAQDLHADRILYVVGAPQHLHLSMIFEVARLAGW 375

Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFITLRH--------- 412
                    QI  +L    ++   R G PI++        +RAG  +             
Sbjct: 376 LGDTEPVHVQIGNVLGADGKILKTRSGAPIRLMALLEEAVERAGAVVDAARGDLDDDERS 435

Query: 413 -VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +  +VG  +V++  L   +     FDF ++   +  N   Y+QYA AR  SIFR+A   
Sbjct: 436 AIARQVGIGAVKYADLSVAHDTEYVFDFDRMLALNG-NTGPYLQYAAARIYSIFRKAG-- 492

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                  L P +        + +E  L + L ++  V+ +      P++L  YL++LA  
Sbjct: 493 -------LDPADARGAVVLGEPAERALGLALLDFGAVVGDVAALLAPHRLCTYLFELAQA 545

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +           + A   +L   RL L  AV   +  GL+++G+ +P  M
Sbjct: 546 FTAFYDA------CPVLTAPTDELRASRLALTAAVLGTLVEGLDLLGIAAPERM 593


>gi|148379062|ref|YP_001253603.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932090|ref|YP_001383444.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934799|ref|YP_001386991.1| arginyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166232777|sp|A7FSW7|SYR_CLOB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232778|sp|A5I0R5|SYR_CLOBH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148288546|emb|CAL82626.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928134|gb|ABS33634.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930713|gb|ABS36212.1| arginine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 563

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 247/576 (42%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY--SSELLNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K  G+   D        LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHGEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L +              F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKGDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|303239264|ref|ZP_07325793.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593309|gb|EFL63028.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 565

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 126/583 (21%), Positives = 245/583 (42%), Gaps = 112/583 (19%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111
           LS+ L   P  IA  +  +I     ++ + + G G++N Y    ++   +L  I   G  
Sbjct: 45  LSKTLRKAPHIIAGELADKITKPECIEKICVIG-GYLNFYAEKVNFTTIVLKKIQEQGEN 103

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G + +GKG  + +++ + N   P H+GH    V+G++L  +  F GY      ++ D G
Sbjct: 104 FGSSDVGKGKNIVLDYCATNIAKPFHIGHLPTTVIGNSLYKIFKFLGYNCVGINHLGDWG 163

Query: 172 AQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK-----HVGKELADKYSSELLN 223
            Q   L ++    Y++  + N++++   P      +Y+K      + K L D+  +    
Sbjct: 164 TQFGKLIVA----YKK--WGNNAEIEKNPIKELVKIYVKFHKEAKIDKSLDDEGRAAFKA 217

Query: 224 FPEE--------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
             +         KW    +D S+    +I    L  L I  D +  E  F+      +  
Sbjct: 218 IEDGKDEYVKLWKWF---RDISISEFKRI----LGVLKIDFDSWNGESFFN----DKMEP 266

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYT 332
           +I+ L  +G + E       S+     D+              + + P   +L+SDG+  
Sbjct: 267 VINELKEKGLLQE-------SQGAHIVDL-------------SEFNMPPCIILRSDGATL 306

Query: 333 YFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   DL A F  K    F  ++Y + +  + + ++L  V   +    A+       LV +
Sbjct: 307 YATRDLAAIFYRKETYDFHKILYCVATQQNLHFQQLFKVIEKMGYPWAE------NLVHV 360

Query: 392 YRDGMPIK---MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------------ 436
               + ++   M  R G  + L  V+ E  S ++   ++  KN EL              
Sbjct: 361 ANGMISLESSSMGTRQGTAVFLDDVLSEAVSKAL--AIIEEKNPELEGKEEVSRMVGIGA 418

Query: 437 FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
             F  +K +  ++ VF              Y+QY YAR  S+ ++ ++   DL  +    
Sbjct: 419 IKFSALKNKRIKDSVFAWEKVLNFEGETSCYIQYTYARICSVIKKVEN-SEDLGINY--- 474

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++ +   +D  +L     LA++P ++E+A+   EP  ++ YL DL   ++  +     N
Sbjct: 475 SLLAEGDSYDVVKL-----LAKFPDIVESASNEYEPSIISKYLIDLVQSYNKFYHF---N 526

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L    ++  +L   R+ L  AV  ++ +G++++G+E P  M
Sbjct: 527 PIL----SSEDELKYSRIALCKAVKIVVKNGMSLLGIECPERM 565


>gi|302683480|ref|XP_003031421.1| hypothetical protein SCHCODRAFT_68587 [Schizophyllum commune H4-8]
 gi|300105113|gb|EFI96518.1| hypothetical protein SCHCODRAFT_68587 [Schizophyllum commune H4-8]
          Length = 599

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 115/526 (21%), Positives = 209/526 (39%), Gaps = 93/526 (17%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIV-------VSGIEY 112
           P  I   ++ + K D  + +V +  K F++  L + + +R +L  +            EY
Sbjct: 74  PNEIGAKVIEKFKPDEFIAAV-VQDKAFLHFRLNTENMIRSVLEQVTDLTHNTPSKEPEY 132

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           GRN +GKG ++ IE+ S N     HVGH R  ++G  LA+L    G++V    Y+ D G 
Sbjct: 133 GRNELGKGKRLVIEYSSPNIAKSFHVGHLRSTIIGAFLANLYKAHGWDVVSLNYLGDWGT 192

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q   +A+          Y +  +L +     ++  +V K   D  +   +     KW   
Sbjct: 193 QFGLIAVGF------EKYGSQEELEKDAIKHLFDIYV-KINKDAEADPEVKAEAAKWFKR 245

Query: 233 VKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           ++D   +A+          +K   ++   LN+  D++  E    +     + D ++ L +
Sbjct: 246 MEDGDEEALKNWRVWRELSVKKYAEEYSRLNVHFDVYTGESKVSK---KSMDDALERLEK 302

Query: 283 QGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            G +  +EG                 K +   +  +G  V R   K DG+  Y   D+  
Sbjct: 303 MGLIDDHEGA----------------KLVNLEAYKMGKAVVR---KKDGTSIYLTRDIGG 343

Query: 341 FKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQIN------------- 382
              +YE+  FD MIYV+ S      + + K L+ +    ++    IN             
Sbjct: 344 AVERYEQYKFDRMIYVVSSQQDLHLAQFFKVLDLLEYPWAKNLVHINYGLVQGMSTRKGT 403

Query: 383 -VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---EVGSDSVRFMMLWRKNSELLDFD 438
            V L +++R     M  +M K    +  +    +    +G   V+   +  K      F+
Sbjct: 404 VVFLDQIIREAASVMHEQMQKNEEKYKAIEDPEETSLNIGITGVKIQDMQAKRINNYTFN 463

Query: 439 FCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL- 496
           + ++K  +    P  Y+QYA+ R  SI R+   + P           +P  S+ D + L 
Sbjct: 464 WDRMKSFEGDTGP--YLQYAHVRLASIARKNPHLLP-----------LPAPSQIDIATLV 510

Query: 497 ------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 +++  L  YP V++ A    EP  +  +L+ L  V    W
Sbjct: 511 QSNHAREIVFLLGSYPDVVKTAMRTHEPSAIVTFLFRLCHVISSAW 556


>gi|255745182|ref|ZP_05419131.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262155960|ref|ZP_06029081.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|255737012|gb|EET92408.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030271|gb|EEY48914.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 592

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 133/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 42  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 101

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 573 TAKTIKQGLALLGIDTLERM 592


>gi|308800206|ref|XP_003074884.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri]
 gi|116061434|emb|CAL52152.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri]
          Length = 603

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 207/513 (40%), Gaps = 57/513 (11%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A +IV  I      DS+ IAG GFIN  LS  +   IL+ +   G        G+
Sbjct: 118 NPREVAAVIVDGISDTTTFDSITIAGAGFINFKLSDHF---ILTRLRELGKTVKPTSSGE 174

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V ++F S N    MHVGH R  ++GD L ++  F G +  R  ++ D G Q   L +
Sbjct: 175 SGSVLVDFSSPNIAKEMHVGHLRSTIIGDALCNVFEFCGLKTIRLNHVGDWGTQFGML-I 233

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 + +  +  SDL E Y               K + E  +  ++      K  S Q
Sbjct: 234 QFMTDNKVSPDSAVSDLQECY---------------KRAKERFDQDDD-----FKSQSKQ 273

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSK 297
           A++K+   D  AL     I     D  R +   I D   I  + R    Y  ++P    +
Sbjct: 274 AVIKLQSYDADALRTWKQIC----DASRAEFQTIYDRLNISIIERGESYYNDMIPAVLDE 329

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
              K ++  +          D  + P++  KSDG + Y + DLA  + +  E   D +IY
Sbjct: 330 LVAK-NVVVEDAGALCIFDDDHAEAPVICRKSDGGFNYASTDLAAIRHRALEEKVDRIIY 388

Query: 355 VMGSDHSGYVKRLEAVAAA------VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           V       + + +   A A       S +  ++  LL E        +  K +  + + +
Sbjct: 389 VTDQGQQKHFRAIFKTAHAAGWGHGASGETVKLKSLLDEAEERCLQFLKEKGTDLSAEEL 448

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           +    +  +G  SV++  L         F F ++ +  K N   Y+QY++AR  +I R+A
Sbjct: 449 STASRI--LGVSSVKYADLHNNRLTAYTFSFDRMLDL-KGNTAMYLQYSHARVATILRKA 505

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               P LD    P + +  E   + +E  L VHL +   V+        P K+  YLY L
Sbjct: 506 ----PTLD---LPLDGLHFE---NAAERLLAVHLIKLDDVLAATMKELAPSKICDYLYTL 555

Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTM 557
            ++F+  ++     G EN   R         TM
Sbjct: 556 CTMFNNFYAECKVIGGENEASRLFLCMRTAATM 588


>gi|15642074|ref|NP_231706.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586898|ref|ZP_01676678.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121727379|ref|ZP_01680518.1| arginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|153818393|ref|ZP_01971060.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153821699|ref|ZP_01974366.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227082200|ref|YP_002810751.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507837|ref|ZP_04397342.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511927|ref|ZP_04401406.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519063|ref|ZP_04408506.1| arginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229607382|ref|YP_002878030.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254849161|ref|ZP_05238511.1| arginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298497899|ref|ZP_07007706.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9656621|gb|AAF95220.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121548834|gb|EAX58877.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121630271|gb|EAX62669.1| arginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126511083|gb|EAZ73677.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126520797|gb|EAZ78020.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227010088|gb|ACP06300.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229343752|gb|EEO08727.1| arginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351892|gb|EEO16833.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355342|gb|EEO20263.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370037|gb|ACQ60460.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254844866|gb|EET23280.1| arginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297542232|gb|EFH78282.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 599

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 133/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 417 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 526 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 580 TAKTIKQGLALLGIDTLERM 599


>gi|311978065|ref|YP_003987185.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|82000078|sp|Q5UQ59|SYR_MIMIV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55417274|gb|AAV50924.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204982|gb|ADO18783.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 600

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 128/567 (22%), Positives = 237/567 (41%), Gaps = 118/567 (20%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           ++ +I I  ++  ++++ +  INL       ++ILS   +    Y  N I K  K+ +++
Sbjct: 103 VIKQIMITLNISKLYLSNR--INLLY-----KRILSGSSI----YVPNTITK--KIIVDY 149

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
            S N    MH+GH R  ++G+++  ++   G++V R  ++ D G Q              
Sbjct: 150 SSPNIAKEMHIGHLRSTIIGESICRVLEMCGHDVYRINHVGDWGTQF------------- 196

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYS-SELLNFPEE--KWLPIVKDYSVQAMMKI 244
                          G+ + ++     + Y+ SEL+N  +E  K      D+  Q+ ++ 
Sbjct: 197 ---------------GMLIAYIKNNQIESYTISELMNIYKESRKLFESSIDFKNQSRLET 241

Query: 245 I---RDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSKT 298
           +     +++++ I   I  IS + FH      I  +  I+NL  +G   E       ++ 
Sbjct: 242 VSLQNGNIESITIWQKIHKISMNSFH-----EIYSLLGINNLITKG---ESFYQDQMTEL 293

Query: 299 TQKCDMDRKQLLFRST--MVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMI 353
                 D K  +      M  + + +P +  KSDG +TY  +DL   K + +    D++I
Sbjct: 294 VNSLTSDNKITVENDMKLMFVEGISKPFILQKSDGGFTYDTSDLTALKYRLFIEKADHII 353

Query: 354 YVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+ S    +  ++  +A  +   K  Q+  +   LV L  DG   K+  R+G+ I L+ 
Sbjct: 354 YVVDSSQQEHFSQMFQIAEKLDWIKNQQLQHIGFGLV-LGSDGS--KLKTRSGETIKLQD 410

Query: 413 VVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQ------------------------- 445
           V+D V S +      ++ +KN +  D D   + ++                         
Sbjct: 411 VIDNVVSHASNITRELIKQKNLDWNDDDILTISKKIAINCIKYSDLNNPRLNNYKFDINK 470

Query: 446 ---SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              SK N   Y+ Y  ARC+SI R+  +    L+ D+   N          +   L++H+
Sbjct: 471 MLNSKGNTAVYLMYGLARCKSILRKVPN-NTVLNGDIIIEN---------ENSRNLLLHV 520

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFVQANNRKLTMM 558
            +Y  VI+       P+ L  YLYDL       ++  R    +N  L    ANN      
Sbjct: 521 LKYVEVIDQTVETMCPHYLCIYLYDLIGSLTKFYTTNRCLEYDNDNLIGYNANN------ 574

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
            L++V+ V  II+    +IG+E   ++
Sbjct: 575 -LRIVNMVKIIISKIFELIGLEEIEQL 600


>gi|256074367|ref|XP_002573497.1| arginyl-tRNA synthetase [Schistosoma mansoni]
 gi|238658677|emb|CAZ29729.1| arginyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 629

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 134/597 (22%), Positives = 242/597 (40%), Gaps = 93/597 (15%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           P   + G    N+A+ + +    D  P  IA+ IVA + ++  ++ V +   GFIN+++ 
Sbjct: 78  PTKRSFGDYQCNSALSIRKESNNDQNPFDIAKSIVAALPVNDLIEKVDVVPPGFINIWIK 137

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             ++   +  I++ G+      I     V ++  S N    MHVGH R  ++G++++ L+
Sbjct: 138 QRFISNEVRKILLHGVT--PPFIPHKYSVIVDMSSPNIAKEMHVGHLRSTIIGESISRLL 195

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           +F G++V +  ++ D G Q   L   +     + +Y +    P    P   L+   K   
Sbjct: 196 SFLGHKVLKLNHLGDWGTQFGMLIAHL-----KEIYPDHKTAP----PISDLQAFYKTSK 246

Query: 215 DKYSSELLNFPEEKWLPIVK------DYSVQAMMKIIRDDLKAL-NIQHDIFISEDDFHR 267
            +Y  E  +F +   + +VK      +Y V A  +I     K   ++ H + I E+   R
Sbjct: 247 TRYDEE-KDFNQRAHMAVVKLQQNDPEY-VHAWKQICDISRKEFDDVYHRLGI-ENLIER 303

Query: 268 GDP---SPIRDIIDNLARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           G+    S + + +++L  Q  + E     IL PPK                       +V
Sbjct: 304 GESFYQSRMEEFVNDLKSQNVLQEDEGRLILWPPKC----------------------EV 341

Query: 321 DRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              ++KSDG +TY  +DL A  +  +E   D ++YV+    S ++  + A A  +     
Sbjct: 342 PLTVVKSDGGFTYDTSDLTALLQRLHEEKADWVLYVVDMGQSVHLNTVFAGAEMLGYYNP 401

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            ++ +      +       K   R+GD + L  ++DE    +   ++   +N EL + +F
Sbjct: 402 NVHKVQHIGFGVVLGEDKKKFKTRSGDTVRLVDLLDEGLERAKNRLLEKERNKELTEAEF 461

Query: 440 CKVKE----------------------------QSKENPVFYVQYAYARCRSIFRQAKDI 471
            + ++                              K N   Y+ YAY R RSI R A   
Sbjct: 462 ERAQKAVAYGCIKYADLSHSRTIDYVFSFDRMLDDKGNTAVYLLYAYTRIRSIIRNAG-- 519

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           + +   +   + V P   E    EL L   L   P ++         + L  YLYDL+  
Sbjct: 520 YSEKTINEISKTV-PLIFEHPM-ELTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCD 577

Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +        N     VQ N       R+ L  A A ++  G +I+G+E+  +M
Sbjct: 578 FTNFYDACYCIERNQETGDVQINKE-----RIVLCEATARVMKCGFDILGIETVEKM 629


>gi|169623233|ref|XP_001805024.1| hypothetical protein SNOG_14853 [Phaeosphaeria nodorum SN15]
 gi|111056585|gb|EAT77705.1| hypothetical protein SNOG_14853 [Phaeosphaeria nodorum SN15]
          Length = 749

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 221/563 (39%), Gaps = 117/563 (20%)

Query: 101 ILSSIVVSGIEYG--RNL---------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +L  ++ SG EYG  RNL          GK  K+ +EF S N   P H GH R  ++G  
Sbjct: 223 VLPMVLKSGAEYGFNRNLGLRNPEDPAQGK-KKMIVEFSSPNIAKPFHAGHLRSTIIGGF 281

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYL 206
           LA+L   +G++V R  Y+ D G Q   LA+         L+ N+ +L   P G+   +Y+
Sbjct: 282 LANLYEGAGWDVVRMNYLGDWGKQYGVLAIGF------DLFGNEEELVKNPIGHLYDIYV 335

Query: 207 K-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           K     H   E      +E     EE      KD S Q   KI + + + ++ Q   +  
Sbjct: 336 KVSTIQHEEAEQVKALKAEAAKLKEEG-----KDASEQEA-KITKIETEGIDEQARKYFK 389

Query: 262 EDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD--MDRKQLLFRS 313
                 G+P  +      RD+     +  Y    I     S  +Q  D  M+    +   
Sbjct: 390 --GMVDGEPKALGIWKRFRDLSIEKYKATYARLNIRYDDYSGESQVKDESMELAAKIMWE 447

Query: 314 TMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             V +D +  ++                K DG+  Y   D+     + E+  FD+MIYV+
Sbjct: 448 KKVCEDSEGAVIVDLTKHSKKLGKAVVKKKDGTSLYLTRDIGEAIQRVEKYHFDHMIYVV 507

Query: 357 GSDHSGYVKRLEAVA-----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            S    ++ +L  +        +S +   IN            GM + MS R G    L 
Sbjct: 508 ASQQDLHLAQLFKIEELMGRTDISSRCTHINF-----------GMVLGMSTRKGTAKFLD 556

Query: 412 HVVDEVG--------SDSVRF------------------MMLWRKNSELLDFDFCKVKEQ 445
            ++ +VG        S+  ++                  M+   K   + ++ F   +  
Sbjct: 557 DILRDVGEKMHDVMRSNQAKYEQVENPDQVADTLGISAVMVQDMKGKRINNYTFDMDRMT 616

Query: 446 SKENPVF-YVQYAYARCRSIFRQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVH 501
           S E     Y+QYA+AR  SI+R+A    P L   D      N++ +    D     L+  
Sbjct: 617 SFEGDTGPYLQYAHARLCSIYRKALAADPSLEKVDLASADLNLLTEPHAID-----LVRQ 671

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA +P    N    QEP  +  YL+ +A      + H      L+ V    R + + RL 
Sbjct: 672 LASWPDTFLNTIKTQEPTTVLTYLFKMAHALSSSYDH------LQVVGTKERGVMLARLA 725

Query: 562 LVHAVASIINSGLNIIGVESPNE 584
           L  A   ++++G+ ++G+ SP E
Sbjct: 726 LYVAARQVLSNGMRVLGL-SPVE 747


>gi|260914195|ref|ZP_05920668.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631828|gb|EEX50006.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 597

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 124/596 (20%), Positives = 227/596 (38%), Gaps = 88/596 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++  G +P   AE ++ ++ ++   + + +AG GFIN++
Sbjct: 47  LVRQSSKAQFGDYQANGIMAAAKKAGYNPREFAEKVIQQLDLNGIAEKIELAGPGFINIF 106

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +L + + +  ++  + G  +  K T V  ++ S N    MHVGH R  ++GD +  
Sbjct: 107 LDKHWLAENVQN-ALNDEKLGITVTEKQTVV-ADYSSPNVAKEMHVGHLRSTIIGDAVVR 164

Query: 153 LMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDS 194
            + F G +V R  ++ D G Q   L                   L  F+R  +  Y++D 
Sbjct: 165 TLEFLGNKVIRANHVGDWGTQFGMLIAYLEKMENENASEMELSDLEAFYRAAKEHYDSDP 224

Query: 195 DLPEGYYPGV--------YLKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQA----M 241
           +  E     V        Y + + K+L D        N+         KD   ++    M
Sbjct: 225 EFAEKARNYVVKLQGGDEYCRTMWKKLVDITMQQNQQNYNRLNVTLTEKDVMGESLYNPM 284

Query: 242 MKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  I +DLK    A+  +  + +  D+F   D   +  I+      G++Y          
Sbjct: 285 LPSIVEDLKKRHLAVEDEGALVVYLDEFKNKDGEAMGVIVQK-KDGGFLYTTTDIAAAKY 343

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  + DR  L+F  T     + +  L              Y    ++    N   ++G
Sbjct: 344 RYETLNADRA-LVFSDTRQSQHMQQAWL--------ITRKAGYVPDNFQLEHKNFGMMLG 394

Query: 358 SD-------HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            D         G VK  + +  AV      IN               +   ++A      
Sbjct: 395 KDGKPFKTRTGGTVKLADLLDEAVERATQLIN----------EKSTALSEQEKAA----- 439

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             V++ V   SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF ++  
Sbjct: 440 --VIEAVAIGSVKYADLSKNRTTDYIFDWDNML-SFEGNTAPYMQYAYTRIRSIFNRS-- 494

Query: 471 IFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  D+    +     +F D  E  L V L ++   ++       P+ L  YLY+LA
Sbjct: 495 -------DISESQLQQATLKFADEKERVLAVKLLQFEEAVQVVAKEGSPHILCTYLYELA 547

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            VF   + H         +   +  + M RL+L       +  GL ++G+++  +M
Sbjct: 548 GVFSSFYEH------CPILNNEDENVKMSRLKLALLTEKTLKQGLTLLGIKTVEKM 597


>gi|298373011|ref|ZP_06983001.1| arginine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275915|gb|EFI17466.1| arginine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 593

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 235/548 (42%), Gaps = 80/548 (14%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL +   Y  ++L+ I  S  +YG      K   + IEF S N   P+H+GH R  
Sbjct: 78  KGFLNLVVDRGYFVRLLNEID-SHRQYGFVKANEKSPLMMIEFSSPNTNKPLHLGHIRNN 136

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYY 201
           ++GD+++ +   SG+ V +   +ND G  I  + LA  +F   +    +    D   G Y
Sbjct: 137 LLGDSISRIQEASGWRVVKTNIVNDRGIHICKSMLAWKMFGNGETPQSSGIKGDHLVGKY 196

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFI 260
              + +   K++ +  +  +     E+  PI+++   QAM+K   + D + +++    ++
Sbjct: 197 YVRFNEEYRKQVEELTAQGVAKEEAERTAPIMRE--AQAMLKRWEEGDGEVIDLW---YM 251

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR---KQLLFR----- 312
             +  + G  +  R +       G  ++ I    ++    K ++ R   + + ++     
Sbjct: 252 MNNWVYEGFDATYRSL-------GISFDKIYYESQTYIVGKKEVLRGLDEGVFYQKEDGS 304

Query: 313 --STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
             + +  D +D + LL++DG+  Y   D+   K +YE    D M+YV+G++ + + + L 
Sbjct: 305 VWADLTADGLDEKLLLRADGTSVYMTQDIGTAKLRYEDYDIDKMVYVVGNEQNYHFQVLA 364

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVDEVGSDSVRFM 425
            +   +  +  Q      ELV      + +   KM  R G  +    ++DE+  ++    
Sbjct: 365 ILLHRLGFRWGQ------ELVHFSYGMVELPEGKMKSREGTVVDADDLIDEMTDEAYNIT 418

Query: 426 MLWRKNSELL--------------DFDFCKVKEQSKENPVF--------------YVQYA 457
               K +E+                  +  +K    +N VF              ++QY 
Sbjct: 419 KELGKIAEMTPDEARQTARIIGLGALKYFILKVAPVKNMVFDPRESIDFNGNSAPFIQYT 478

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR  SI R+A D       D      +        SE  +I +L+ +  V+  A+    
Sbjct: 479 NARINSILRKAAD-------DGIVLETVCDTVSISDSEKYIIQYLSSFAEVLGEASRTFS 531

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y YDLA  F   +    + P LR   A+ R L   RL L   ++ ++ + ++++
Sbjct: 532 PALIANYCYDLAKEFSRFY---HDCPILREENADVRNL---RLVLCRTISKVLVNAMSLL 585

Query: 578 GVESPNEM 585
           G+E PN+M
Sbjct: 586 GIELPNKM 593


>gi|237794368|ref|YP_002861920.1| arginyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511639|sp|C3KSZ0|SYR_CLOB6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229261831|gb|ACQ52864.1| arginine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 563

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAIVTRYVIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|238919488|ref|YP_002933003.1| arginyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511644|sp|C5B832|SYR_EDWI9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238869057|gb|ACR68768.1| arginyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 577

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 135/591 (22%), Positives = 239/591 (40%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ +GL P  +AE +VA + +D     V IAG GFIN++L  ++L    
Sbjct: 37  GDYQANGIMSAAKKMGLPPRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLAAQA 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + +      G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  DAALAD-PRLGVARVEPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L ++   + Q +    D  L   E +Y            A K+  E
Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQGSSETGDMALADLEAFY----------REAKKHYDE 203

Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP-- 270
              F E     +VK     +Y  +   K++   ++     +D   + +++DD   G+   
Sbjct: 204 DAAFAERARGYVVKLQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVM-GESLY 262

Query: 271 SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           +P +  I+ +L  +G   E       S+      ++     FR+   G+ +   + K DG
Sbjct: 263 NPMLPGIVADLKAKGLATE-------SEGATVVFLNE----FRNKE-GEPMGVIVQKKDG 310

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQI 381
            Y Y   D+A  K +YE  G + ++Y + S    +       V++   V  +VS +    
Sbjct: 311 GYLYTTTDIACAKYRYETLGANRILYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMF 370

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
            ++L       +DG P K   RAG  I L  ++DE                         
Sbjct: 371 GMMLG------KDGKPFK--TRAGGTIKLADLLDEAIERAAKLIAAKNPELSGDELKALV 422

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  SIF++A      
Sbjct: 423 EVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----G 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +D +     +   E      E  L   L ++   I +      P+ +  YLY++A +F  
Sbjct: 477 IDENTLQGAITLTEER----EKALATRLMQFEETILSVAREGTPHVMCAYLYEVAGLFSS 532

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           + A    +   RL+L    A  + +GL+ +G+++   M
Sbjct: 533 FYEA------CPILNAEEESVRASRLKLAALTARTLKTGLDTLGIKTVERM 577


>gi|153828893|ref|ZP_01981560.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148875599|gb|EDL73734.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 599

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 133/617 (21%), Positives = 232/617 (37%), Gaps = 130/617 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS  +L     + +   I  G       T V  ++ + N    MHVGH R  ++GD +  
Sbjct: 109 LSEEFLAAQAEAALAD-IRLGVAQEAPKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVR 166

Query: 153 LMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNND 193
            + F G++V R  +I D G Q   L                    L  F+R  + LY+ D
Sbjct: 167 TLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDED 226

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                             E A  Y  +L     F  E W  +V    +Q           
Sbjct: 227 EQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ----------- 261

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRK 307
                     ++ ++ R + S  R+ +   +    +Y  +LP   S    K    + D  
Sbjct: 262 ----------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGA 307

Query: 308 QLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
           Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S    +
Sbjct: 308 QVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQH 367

Query: 364 -------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                  V++   +   VS +     ++L       +DG P K   RAG  + L  ++DE
Sbjct: 368 LMQAWIIVRKAGYIPENVSLEHHAFGMMLG------KDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 VGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE----------------- 448
             ++     ++  KN EL           +     K  + SK                  
Sbjct: 420 --AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEG 477

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   
Sbjct: 478 NTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEA 528

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA +F   +           + A    +   RL+L    A 
Sbjct: 529 VQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAK 582

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL ++G+++   M
Sbjct: 583 TIKQGLALLGIDTLERM 599


>gi|297588542|ref|ZP_06947185.1| arginine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573915|gb|EFH92636.1| arginine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 564

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 254/618 (41%), Gaps = 94/618 (15%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +K  +   D  +  EK+I D  +IE P +   G  +      L++     P  IA
Sbjct: 3   NFKEEVKQIILGFDTGL-TEKEISD--LIEIPPNSDMGDYAF-PVFKLAKTFRKAPNLIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKV 123
           E +  +   + ++  +   G  ++N ++  S   K++ S++   +  ++G   IG G  V
Sbjct: 59  EELAKKEFSNENIKKITNVGP-YVNFFVDNS---KLVESVLTEAVKDDFGSGHIGVGKNV 114

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
             +F S N   P H+GH R  V+G+ + ++M + G+  T   YI D G Q   + +S + 
Sbjct: 115 VFDFSSTNIAKPFHIGHLRSTVIGNAIRNIMKYQGFNTTGVNYIGDYGTQFG-MMISAYL 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDYSVQAM 241
           ++      N   + E     V    + KE  + Y  E  +     W   +  KD +   +
Sbjct: 174 KWGDEDKINADPIKELLNLYVKYNKIAKE-DESYMDEARD-----WFDKLEKKDPTAVKL 227

Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               R+  LK     +D+   E D   G+    + I D L                    
Sbjct: 228 WSWFREISLKEFQRVYDLLGVEFDNFNGESFHSQFIGDALEA------------------ 269

Query: 301 KCDMDRKQLLFRS----TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFD 350
              +D+K LL  S     +  DD + P   + KS+GS TY   D+A   Y K  Y+  F 
Sbjct: 270 ---IDKKNLLEESDGAMIINLDDENLPPVLIKKSNGSSTYLTRDIATAMYRKKTYD--FY 324

Query: 351 NMIYVMGSDHSGYVKRLEAVA----------------AAVSEKKAQIN------VLLCEL 388
             +YV+ S    + ++L AV                   VS K   +       + L ++
Sbjct: 325 KNVYVVASQQKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDV 384

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +    D     + +R  +      V  +VG  +V F  L+    +   FD+ +V     E
Sbjct: 385 LNRAIDKTKSIIEERNPNLENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE 444

Query: 449 NPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
               Y QY +AR  SI  + + ++  +  FDL            D +E+ ++ HL+++  
Sbjct: 445 TGP-YTQYTFARSCSILDKGEFELKENSKFDLL----------VDDTEIDIVKHLSKFEE 493

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+ NAT   EP  L  Y  +LA +F+  ++    N  +  V+    +L   RL L ++V 
Sbjct: 494 VLLNATEKYEPSFLTRYTVELAKLFNKFYA----NCPINTVE---DELKYQRLYLTYSVN 546

Query: 568 SIINSGLNIIGVESPNEM 585
             +   L+++G+E+P  M
Sbjct: 547 KCLKLSLSLLGIEAPVRM 564


>gi|329956612|ref|ZP_08297185.1| arginine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523984|gb|EGF51060.1| arginine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 605

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 142/627 (22%), Positives = 264/627 (42%), Gaps = 120/627 (19%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   ++ +    S F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I    ++YG   +  K   V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHAD-VQYGIAAVTDKSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++  +G  V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 145 LANIILANGNRVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDD--L 249
            Y   + KH     KEL  K+ SE L+  E K       P++K+ + + ++K   +D  +
Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQSEGLSEEEAKTRAEAESPLMKE-AREMLVKWEANDPEV 256

Query: 250 KAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDR 306
           +AL   +   ++   D+ +R     +    D +  +   Y EG     K K  +  +   
Sbjct: 257 RALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESETYLEG-----KEKVMEGLE--- 304

Query: 307 KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
           K   +R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D M+YV+G
Sbjct: 305 KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMVYVVG 364

Query: 358 SDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           ++ +                          G V+  E    +        + L+ E++  
Sbjct: 365 NEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMINT 424

Query: 392 YRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELLDFD 438
            ++     G    ++K   D     ++   VG  ++++ +L    RKN      E +DF+
Sbjct: 425 AKETSGELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESIDFN 479

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                     N   ++QY YAR +S+ R+AK+    +   L      P   E    E  L
Sbjct: 480 ---------GNTGPFIQYTYARIQSVLRKAKEAGITVPAQL------PAGIELSEKEEGL 524

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           I  +A++  V++ A     P  +A Y YDL   ++  +           ++  N  + + 
Sbjct: 525 IQMVADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEAVKIF 578

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L   VA ++  G+ ++G+E P+ M
Sbjct: 579 RLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|322805401|emb|CBZ02965.1| arginyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 563

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 248/576 (43%), Gaps = 99/576 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           L++     P  IAE +  +I  +   + V   G  ++N ++  + L K +L  ++    +
Sbjct: 44  LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG + +G+G  V +E+ S N   P H+GH     +G  L  +++F GY      ++ D G
Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGSALYKILSFEGYNCIGINHLGDWG 161

Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227
            Q   L +S +  W  ++AL  +      G    +Y+K H   E   +   E  LNF   
Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L    +   +   +     LK  N  +D+   + D   G+ S   D +D + ++    
Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D K LL  S     ++ D+ + P   + KSDG+  Y   DLA 
Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396
             Y K  Y+  F   IYV+G+  + + K++      +    A     +   LV+L     
Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444
             K+S R GD + L  ++++   ++++  ++  KN  L + +            F  +K 
Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + VF              YV+Y+YAR +SI R+A ++  + D+     + +  + E
Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549
           F+ ++L     L  +   I NA    EP  +  Y+ ++A  F+  + +HG        + 
Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-------ILN 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +  + + R++LV A   +I + LN++G++   EM
Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563


>gi|195569059|ref|XP_002102529.1| GD19955 [Drosophila simulans]
 gi|194198456|gb|EDX12032.1| GD19955 [Drosophila simulans]
          Length = 572

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 197/505 (39%), Gaps = 93/505 (18%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V   
Sbjct: 117 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--------------KWL 230
             Q L  +D ++       +Y  +V    A +   E+     +              K  
Sbjct: 174 --QMLNVSDKEMQLSPIETLYKSYVAANQAAEQRPEIAQQARDLFAALEGGTDRAMAKQW 231

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
              + Y+V+ + K+       L +  D +  E  + +     I+D++D L        G+
Sbjct: 232 QQYRKYTVEDLSKVY----NRLGVYFDSYEWESQYSQ---QQIQDVLDKLRS-----AGL 279

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
           L P                  R  +V D    P++KSDGS  Y A D+A    +  R  F
Sbjct: 280 LQPEHDG--------------REIVVVDGRRIPVIKSDGSTLYLARDIAALVERLSRFQF 325

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             ++YV+ +  + +   L    AA+ ++      L  E ++  + G    MS R G  I 
Sbjct: 326 SRLLYVVDNGQADHFNALFKTTAALDDR------LSLEQLQHVKFGRIHGMSTRQGKAIF 379

Query: 410 LRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFYVQ 455
           L+ V+DE   +  +        R+N  L D   C +           K++ + +  F  Q
Sbjct: 380 LKDVLDEARDIMREKRNLSATTRENYSLDDEHVCDILGVSAVLINVLKQRRQRDHEFSWQ 439

Query: 456 YA------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIV 500
            A            Y  CR       D F D++ D    ++ P    F T     L L+ 
Sbjct: 440 QALQVNGDTGIKLQYTHCR--LHSLLDNFRDVNLD----DIKPDWKHFATEPADALDLLY 493

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            LA + + +  +    E   L  YL+ L +      +  R   RL   Q ++++  + RL
Sbjct: 494 ALARFDQSVWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQESSQEKQLQRL 547

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L +A    +  G+ ++G+   ++M
Sbjct: 548 LLFNAAKKTLRQGMELLGLRPLDQM 572


>gi|212692316|ref|ZP_03300444.1| hypothetical protein BACDOR_01812 [Bacteroides dorei DSM 17855]
 gi|237711416|ref|ZP_04541897.1| arginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237726123|ref|ZP_04556604.1| arginyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265752822|ref|ZP_06088391.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212665193|gb|EEB25765.1| hypothetical protein BACDOR_01812 [Bacteroides dorei DSM 17855]
 gi|229435931|gb|EEO46008.1| arginyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229454111|gb|EEO59832.1| arginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263236008|gb|EEZ21503.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 606

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 133/587 (22%), Positives = 234/587 (39%), Gaps = 129/587 (21%)

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSAN 131
           P++ S + A KGF+NL ++     ++L+SI  +  EYG   I K T+    V IE+ S N
Sbjct: 72  PELVSAYNAVKGFLNLTIASDCWIELLNSIQAAP-EYG---IEKATENSPLVMIEYSSPN 127

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P+H+GH R  ++G+ LA++MA +G +V +   +ND G  I    L+  W     L  
Sbjct: 128 TNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKY 180

Query: 192 NDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE------------ 226
            + + PE          G Y   + KH     KEL  +Y +E LN  E            
Sbjct: 181 GNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAEANSPLM 240

Query: 227 -------EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDP 270
                   KW     D  ++A+ + + D          K + +  D I+   + +  G  
Sbjct: 241 LEAREMLRKWE--ANDPEIRALWRKMNDWVYAGFDETYKMMGVSFDKIYYESNTYLEGKE 298

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  +      +G+ Y       K   +   D+         T  G D  + LL+ DG+
Sbjct: 299 KVMEGL-----EKGFFYR------KEDNSVWADL---------TAEGLD-HKLLLRGDGT 337

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             Y   D+   K +++    + MIYV+G++ + + + L  +   +  +  +  V     +
Sbjct: 338 SVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGM 397

Query: 390 RLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLD--------- 436
               +G   KM  R G  +     +  +++     S     L     E  D         
Sbjct: 398 VELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIVGLG 454

Query: 437 -FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKD---IFPDLDFD 478
              +  +K  +++N  F              ++QY YAR +S+ R+A +   + P+    
Sbjct: 455 ALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARVQSVLRKAAEAGIVIPE---- 510

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +IP   E    E  LI  LA++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 511 -----IIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYHD 565

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  L + RL L   V  I+ + + ++G+E P  M
Sbjct: 566 ------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606


>gi|31077163|sp|Q9KQC6|SYR_VIBCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 577

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 133/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 27  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 87  LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 140 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 199

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 200 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 239

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302
                          ++ ++ R + S  R+ +   +    +Y  +LP   S    K    
Sbjct: 240 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 280

Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S
Sbjct: 281 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 340

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413
               ++ +    A  +  K   I  NV L      + L +DG P K   RAG  + L  +
Sbjct: 341 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 394

Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448
           +DE    +    ++  KN EL           +     K  + SK               
Sbjct: 395 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 452

Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++
Sbjct: 453 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 503

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           + A    +   RL+L   
Sbjct: 504 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESIKQSRLKLAAL 557

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL ++G+++   M
Sbjct: 558 TAKTIKQGLALLGIDTLERM 577


>gi|152999024|ref|YP_001364705.1| arginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160873617|ref|YP_001552933.1| arginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217971704|ref|YP_002356455.1| arginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304411529|ref|ZP_07393142.1| arginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307306695|ref|ZP_07586437.1| arginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166232840|sp|A6WIK3|SYR_SHEB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083547|sp|A9KYS9|SYR_SHEB9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782981|sp|B8E6G9|SYR_SHEB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151363642|gb|ABS06642.1| arginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160859139|gb|ABX47673.1| arginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217496839|gb|ACK45032.1| arginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304350056|gb|EFM14461.1| arginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306910663|gb|EFN41092.1| arginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315265846|gb|ADT92699.1| arginyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 581

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++ S L   L +  V+    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           + NV   ELVR     M         D +TL  +   VG  +V++  L +  +    F F
Sbjct: 402 EANVRALELVRSKNPDM---------DEVTLTEIARVVGISAVKYADLSKNRTSDYIFSF 452

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+ YAY R   IF++  D+  DL      + V+  E E D       
Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTDL--DLSQ---AKIVLEHEKEKDLGN---- 502

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++  ++       +P+ L  YLY+LA  F   +           + A+N      R
Sbjct: 503 -KLAQFGEILSRVVDKGQPHVLCAYLYELAGAFSSFYE------ACPVLAADNDAQKNSR 555

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L    A  +  GLN++G+E+   M
Sbjct: 556 LLLAQLTARTLQKGLNLLGIETLERM 581


>gi|126176036|ref|YP_001052185.1| arginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166232839|sp|A3D9A3|SYR_SHEB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|125999241|gb|ABN63316.1| arginyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 581

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++ S L   L +  V+    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           + NV   ELVR     M         D  TL  +   VG  +V++  L +  +    F F
Sbjct: 402 EANVRALELVRSKNPDM---------DEATLTEIARVVGISAVKYADLSKNRTSDYIFSF 452

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+ YAY R   IF++  D+  DL      + V+  E E D       
Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTDL--DLSQ---AKIVLEHEKEKDLGN---- 502

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++  ++       +P+ L  YLY+LA  F   +      P L    A+N      R
Sbjct: 503 -KLAQFGEILSRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDAQKNSR 555

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L    A  +  GLN++G+E+   M
Sbjct: 556 LLLAQLTARTLQKGLNLLGIETLERM 581


>gi|120600411|ref|YP_964985.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166232844|sp|A1RP36|SYR_SHESW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120560504|gb|ABM26431.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 581

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAFVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++ S L   L +  V+    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           + NV   ELVR     M         D  TL  +   VG  +V++  L +  +    F F
Sbjct: 402 EANVRALELVRSKNPDM---------DEETLAEIARVVGISAVKYADLSKNRTSDYIFSF 452

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+ YAY R   IF++   +  DL      + V+  E E D       
Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTGL--DLSQ---AKIVLEHEKEKDLGN---- 502

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++  ++       +P+ L  YLY+LA  F   +      P L    A+N +    R
Sbjct: 503 -KLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDEQKNSR 555

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L    A  +  GLN++G+E+   M
Sbjct: 556 LLLSQLTARTLQKGLNLLGIETLERM 581


>gi|320165286|gb|EFW42185.1| rars protein [Capsaspora owczarzaki ATCC 30864]
          Length = 742

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 228/551 (41%), Gaps = 99/551 (17%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           +GFI + +    L  IL++IVV G+   +    K  +V I+F S N    MHVGH R  +
Sbjct: 240 RGFITVVVPAKLLATILTNIVVHGVLPPKQ--EKKKRVIIDFSSPNIAKEMHVGHLRSTI 297

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G++L  L+ + G+EV R  ++ D G Q   L   +   +    + N+S  P G     Y
Sbjct: 298 IGESLCRLLEYRGFEVLRVNHVGDWGTQFGMLIAHLKDEFPN--FRNESP-PIGDLQAFY 354

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKII----RDDLKALNIQH 256
                +  AD+       F +  +  +VK     D  V+   K+I    R + + +  + 
Sbjct: 355 KASKKRFDADE------EFKKRAYTEVVKLQAGTDADVRHAWKLICDESRREFELIYKRL 408

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            + I E       P  +  ++ +L ++G+V              + +  RK +      V
Sbjct: 409 HVTIKEKGESFYQPM-MPSVVADLEKRGFV--------------QVEDGRKIMFVPDQAV 453

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVS 375
              V+    KSDG YTY  +DLA  K + E    D +IYV+    S +++ + + A  V 
Sbjct: 454 PLTVE----KSDGGYTYDTSDLAAIKYRIEEEHADWIIYVVDVGQSLHLETVFSAAKHVG 509

Query: 376 ---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------GSD 420
                K +++ +   LV L  DG   K   R+GD + L  ++DE             G D
Sbjct: 510 WLDPAKVRVDHVAFGLV-LGEDGK--KFKTRSGDTVRLVDLLDEAVERAKVVLDSKRGGD 566

Query: 421 ----------------SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                           +V++  L    +    F F ++ +    N   Y+ YAY R  SI
Sbjct: 567 LQPEEYAAALDAVSYGAVKYADLSTSRTSDYTFSFDRMLKLVG-NTAPYLLYAYTRMSSI 625

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            R A      +D     + +     EF +  EL L   L  +P ++   T    P+ L  
Sbjct: 626 ARNA-----GIDVS---KEIAKHPCEFTEGPELALARALIRFPEILNRITDDLMPHTLGS 677

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---------RLQLVHAVASIINSGL 574
           +LY++  ++   +       +LR ++ +  K T           RL L  A + ++  GL
Sbjct: 678 FLYEICQLYSTFYE------KLRIIEHDVDKATGTKTIKSIHYPRLALCEAASLVLKQGL 731

Query: 575 NIIGVESPNEM 585
           +I+G++   +M
Sbjct: 732 SILGMDVVGKM 742


>gi|251778024|ref|ZP_04820944.1| arginine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082339|gb|EES48229.1| arginine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 563

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 225/539 (41%), Gaps = 93/539 (17%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    +    ++ I+  G  YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKGVFAENTINKILKDGDSYGESNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G++L  +    GY+V    ++ D G Q   L +S +  W  + AL       P      +
Sbjct: 137 GNSLYKMFKKEGYDVVGLNHLGDWGTQFGKL-ISAYNRWVDEDAL----EKAPIDELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD-DLKALNIQHDIF 259
           Y+K    + A+K  S      +E  +   K    D   QA+ K  RD  LK     +DI 
Sbjct: 192 YVKF--HDEAEKDPS----LEDEGRMYFKKLETGDAEAQALWKRFRDLSLKEFERVYDIL 245

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + D   G+      +  +++ L  +G + E       S   Q              ++
Sbjct: 246 GVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SNGAQ-------------VVM 285

Query: 317 GDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            DD + P   +LK DG+  Y   DLA   Y K  Y+  F   IYV+GS  + + K++  V
Sbjct: 286 LDDYNMPPCIVLKGDGASIYATRDLAAAMYRKKTYD--FYKSIYVVGSPQALHFKQVFKV 343

Query: 371 AA-----------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K ++ VLL +L+R   +     ++++  D 
Sbjct: 344 LELAGHEWANDCVHVGFGLVKFADRKLSTRKGEV-VLLDDLIRESVEKTLEVINEKNPDL 402

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466
                V  ++G  ++ F  L     + + FD+ ++   + +  P  YVQY+YAR  SI  
Sbjct: 403 ENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYSYARANSIIS 460

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A++I   +D+                 E +L+  LA +   I+ AT   EP  L  Y+ 
Sbjct: 461 RAENISSKVDYSKLSSK----------EEFELVKVLANFNNQIKLATDKLEPSILTRYVI 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++A  F+  ++          +  ++  L   RL LV +   +I +GL ++G++   +M
Sbjct: 511 EVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563


>gi|326796968|ref|YP_004314788.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547732|gb|ADZ92952.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 233/591 (39%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ L  +P   AE ++ ++ +    D V IAG GFIN++L  ++L +  
Sbjct: 37  GDYQANGIMGVAKKLKTNPRAFAEQVLEKLDLTDLADKVEIAGPGFINVFLKNAWLAQEQ 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            S+  S        + +   V +++ + N    MHVGH R  V+GD +   + F G++V 
Sbjct: 97  KSLRKSE-RLDVVTVSEPQTVVVDYSAPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHKVV 155

Query: 163 REYYINDAGAQIN----------------TLALS---VFWRYQQALYNNDSDLPEGYYPG 203
           R+ ++ D G Q                  ++ALS    F+R  +  +++D          
Sbjct: 156 RQNHVGDWGTQFGMLLAYMERLRAESSEISMALSDLETFYREAKKCFDDDEAFSVRAREL 215

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII------RDDLKALNIQHD 257
           V     G E       + +N   E      +   V    K +       DDL+  N+ +D
Sbjct: 216 VVKLQSGDEECKALWQDFINISLEHCEETYQMLGVSLERKNVMPESAYNDDLQ--NVIND 273

Query: 258 I----FISED---------DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +     I ED         +F   D   I  II      G++Y          TT    +
Sbjct: 274 LDAKGLIKEDQGAKCVFLEEFANKD-GEITPIIVQKTGGGFLY---------STTDLAAV 323

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMI--------YV 355
             +Q + ++       DR L   D   +     +  F    + GF D+ I         V
Sbjct: 324 RYRQNVLKA-------DRALYFVDARQSLHFEQI--FTLSRKAGFADDSISLEHMPFGTV 374

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           MGSD   +  R   VA        +++ LL E        +  K    A D   LR++  
Sbjct: 375 MGSDGKPFKTRSGGVA--------KLSALLEEAQERAYKLVASKNPDMAED--ELRNIGR 424

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPD 474
            VG  SV++  L +  +   D+ F      S E N   Y+QYAY+R  SI R A     D
Sbjct: 425 VVGVASVKYADLSKNRTS--DYVFNWDTMLSFEGNTAPYLQYAYSRVASIVRNA-----D 477

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +D      ++    S  +  E  L V L ++   I+       P+ L  YLY+LA  F  
Sbjct: 478 IDAAALQGDI----SVIEDQERALAVKLVQFEEAIQQVGNDGMPHFLCAYLYELAGTFMS 533

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      P L+     + ++   RLQL    AS +  GL+++G+E+   M
Sbjct: 534 FYEAC---PILK----ADEEVKNSRLQLALNTASTLKLGLSLLGIETLERM 577


>gi|146291657|ref|YP_001182081.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166232842|sp|A4Y2U9|SYR_SHEPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145563347|gb|ABP74282.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 581

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++  G +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAFVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +++ S L   L +  V+    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           + NV   ELVR     M         D  TL  +   VG  +V++  L +  +    F F
Sbjct: 402 EANVRALELVRSKNPDM---------DEETLAEIARVVGISAVKYADLSKNRTSDYIFSF 452

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+ YAY R   IF++   +  DL      + V+  E E D       
Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTGL--DLSQ---AKIVLEHEKEKDLGN---- 502

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++  ++       +P+ L  YLY+LA  F   +      P L    A+N +    R
Sbjct: 503 -KLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDEQKNSR 555

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L    A  +  GLN++G+E+   M
Sbjct: 556 LLLSQLTARTLQKGLNLLGIETLERM 581


>gi|291545668|emb|CBL18776.1| arginyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 588

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 121/609 (19%), Positives = 251/609 (41%), Gaps = 106/609 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V  RP  C +     N AM  ++     P  IA+ +VA++          +   GFINL 
Sbjct: 30  VSNRPDLCEY---QCNGAMAGAKAYHKAPFMIADDVVAQLSDSRIFSRAEVVKPGFINLD 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           ++P ++ + ++ +       +E  +N       + I++   N   P+HVGH R A++G++
Sbjct: 87  VNPEFVAEYMNKMAEDEKLSVETAKN----PKTIIIDYGGPNVAKPLHVGHLRSAIIGES 142

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG------ 203
           +  +  F G++V  + ++ D G Q+  +   +  R  + +Y +DS    G YP       
Sbjct: 143 IKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDSFT--GEYPAEAPFTI 200

Query: 204 -----VYLKHVGKELADKY-------SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK- 250
                +Y    GK   D+        ++ LL   +  ++ +        +M +   DLK 
Sbjct: 201 SELEEIYPCASGKSKEDEAYRNEALEATHLLQQGKPGYMAL-----WNHIMNVSVTDLKR 255

Query: 251 ---ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               LN+  D++  E D     P    D+++++ ++G+ YE                D+ 
Sbjct: 256 NYANLNVDFDLWKKESDAQPYIP----DMVEDMKKRGFAYE----------------DQG 295

Query: 308 QLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362
            L+       D  + P   LLKSDG+  Y   DLA    +  + F  D ++YV+      
Sbjct: 296 ALVVDVKEESDTKEIPPCMLLKSDGASLYTTTDLATI-VERMKLFQPDEILYVVDKRQEL 354

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           +  ++   A        +  +       +  +DG P K   R G  + L +++ ++  + 
Sbjct: 355 HFIQVFRCARKTGLVNPETKLSFLGFGTMNGKDGKPFKT--REGGVMRLENLIADIDEEM 412

Query: 422 VRFMMLWR--KNSELLD---------FDFCKVKEQSKENPVF--------------YVQY 456
            R ++  R  K+ +  D           +  +  Q+ ++ +F              Y+ Y
Sbjct: 413 YRKIVENRSVKDKDAKDTAKIVGLSAIKYGDLSNQATKDYIFDVDRFTSFEGNTGPYILY 472

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
              R +SI  +    +     DL    ++P     + SE  L++ L+ +  ++ENA   +
Sbjct: 473 TIVRIKSILNR----YVQEGGDLSTGKILPA---VNASEKNLMLQLSGFAAMVENAFEEK 525

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+K+  Y+Y++++ F+  +         + +   ++      LQL+     ++ + +++
Sbjct: 526 APHKICAYIYEVSNAFNSFYHE------TKILSEEDQAQKESFLQLLQLTRRVLETSIDL 579

Query: 577 IGVESPNEM 585
           +G  +P+ M
Sbjct: 580 LGFSAPDRM 588


>gi|78213959|ref|YP_382738.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|109895048|sp|Q3AGU9|SYR_SYNSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78198418|gb|ABB36183.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 590

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 221/545 (40%), Gaps = 93/545 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ DP    +     IAG GFINL + P  L
Sbjct: 40  GDFQANGALPLAKPLKQAPRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERL 99

Query: 99  RKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +S+ +  G E  G   +     V ++F S N    MHVGH R  ++GD+LA ++ F 
Sbjct: 100 AAEVSARL--GDERLGVPAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFR 157

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216
           G+ V R  ++ D G Q   L   +     +AL   D+ DL +      + +   K   D 
Sbjct: 158 GHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLV---AFYREAKKRFDDD 214

Query: 217 YSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP--S 271
            + +  +  E   L      S++A   +    R + + +  + DI +SE    RG+   +
Sbjct: 215 EAFQSTSRDEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSE----RGESFYN 270

Query: 272 P-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LK 326
           P +  +ID L              K+      D D  Q +F   + G D  +PL     K
Sbjct: 271 PFLPAVIDGL--------------KAAELLVTD-DGAQCVFLEGVQGKD-GKPLPVIVQK 314

Query: 327 SDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKA 379
           SDG + Y   DLA  + ++       G   ++YV  +  + +   +  VA  A      A
Sbjct: 315 SDGGFNYATTDLAAIRYRFGAAPEGDGARRVVYVTDAGQANHFAGVFQVAERAGWIPDGA 374

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           ++  +   LV+   DG   K+  RAGD + LR ++DE                       
Sbjct: 375 RLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEE 431

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+ 
Sbjct: 432 FIQHVAGTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGIARKG 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                    DL   N   Q SE    E  L+  L ++  VI        P +L  YL++L
Sbjct: 491 G--------DLAATNAQLQFSE--PQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFEL 540

Query: 529 ASVFH 533
           + VF+
Sbjct: 541 SQVFN 545


>gi|159041586|ref|YP_001540838.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920421|gb|ABW01848.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 630

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 127/579 (21%), Positives = 237/579 (40%), Gaps = 114/579 (19%)

Query: 88  FINLYLSPS-----YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           FIN +L+ +     Y R +L S +  G +YG+    K   V +E  SANP  P+H+GHCR
Sbjct: 73  FINGFLNTNVNLINYSRLVLDSTIGLGPDYGKVPGVKRLNVIVEHTSANPLHPLHIGHCR 132

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGY 200
             V+GD+L  L+ F G+ V+  +Y++D G Q+  LAL  + + ++   N       P+  
Sbjct: 133 NMVLGDSLVRLLRFMGHNVSARFYLDDTGIQVMYLALG-YSKVRELAKNRIESGQKPDHV 191

Query: 201 YPGVY--------LKHVGKELADKYSSELLNFPEEK--WLPIVKDY--SVQAMMKIIRDD 248
              +Y        ++ + K L  K   E     +E+  W+ ++ D+    + ++  + + 
Sbjct: 192 MWVIYSVTNAVAEVQRISKVLEGKSEEEYRELIKERDEWVGVIADWLSKDKELVNALVEA 251

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIID---NLARQGY-------------------- 285
           L ++++  ++      +  GD   ++ I+    NL  +G+                    
Sbjct: 252 LSSIDVNAEVARMAKMYEDGD-EKVKGIVREAVNLVLKGFEETFKLFNVKFDSYDWESEI 310

Query: 286 -VYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVG------DDVDRP-------LLKS 327
            VY G    I+        +  +      +FR+          D++  P       L +S
Sbjct: 311 AVYSGLAKRIIMDLVKAAPKYVEFKDGVYVFRADKAAAELKLWDELKLPKFIPPATLNRS 370

Query: 328 DGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   D+AY   C      D ++ V+  + +    +L  +   +    ++I     
Sbjct: 371 DGTTLYLTRDVAYAVWCLTNCNPDVVVRVIAVEQTHPQAQLRIMLKLLGYDASRIVHYAY 430

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------VGSDSVR 423
           E+V L       KMS R G  +T+  ++D+                       V   ++R
Sbjct: 431 EMVNLGE----AKMSSRRGQAVTIDGLLDDAVKRVKAIASGRSGLNTDDVAYAVAVGAIR 486

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  +    S+ + FD+ +V + ++ +  F +QY Y R  SI  +A       + D     
Sbjct: 487 YYFVSVSPSKQIVFDWGRVLDMNQNSGPF-IQYTYVRAYSILSKA-------NLDHIQYT 538

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA---SVFHGHWSHGR 540
           V P  S+    E  LI+ + E+P V+   +   +   L  ++  LA   + F+  +    
Sbjct: 539 VPPTLSQ---EEGDLILMIGEFPEVLLRVSEDLKLENLVSFMNRLALEFNTFYEKYPVLN 595

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             P LR            RL LV AV  ++ + +NI+G+
Sbjct: 596 AEPGLR----------EFRLALVKAVKIVLENSMNILGI 624


>gi|312222441|emb|CBY02381.1| hypothetical protein [Leptosphaeria maculans]
          Length = 866

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 226/575 (39%), Gaps = 117/575 (20%)

Query: 89  INLYLSPSYLRKILSSIVV-SGIEYG--RNLIGK--------GTKVNIEFVSANPTGPMH 137
           I  +  P  L  ++  +V+ SG  YG  +NL  K          ++ +EF S N   P H
Sbjct: 328 IGFFFKPETLTALVVPMVLKSGANYGFNKNLGLKNPLDPSSGAKRMIVEFSSPNIAKPFH 387

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL- 196
            GH R  ++G  LA+L   +G+EV R  Y+ D G Q   LA+         L+ N+ +L 
Sbjct: 388 AGHLRSTIIGGFLANLYEGAGWEVIRMNYLGDWGKQYGVLAIGY------DLFGNEEELV 441

Query: 197 --PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
             P G+   +Y+K     H   E   +  +E     EE      KD S Q   KI + + 
Sbjct: 442 KNPIGHLYDIYVKVSSIQHDEAEQLKELKAEAAKLKEEG-----KDASEQE-AKIKKIET 495

Query: 250 KALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + ++ Q   +        G+P  +      RD+     +Q Y    I     S  +Q  D
Sbjct: 496 EGIDEQARKYFK--GMVDGEPKALGIWKRFRDLSIEKYKQTYARLNIRYDDYSGESQVKD 553

Query: 304 --MDRKQLLFRSTMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKY 345
             M+    +     V ++ +  ++                K DG+  Y   D+     + 
Sbjct: 554 ESMEEAAKIMWEKKVCEESEGAVIVDLTSHSKKLGKAVIKKKDGTSLYLTRDIGAAIERV 613

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIK 399
           E+  FD MIYV+ S    ++ +L  +        +SEK   IN            GM + 
Sbjct: 614 EKYHFDRMIYVVASQQDLHLAQLFKIEELMGRKDISEKCQHINF-----------GMVMG 662

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------KNSELLDFDFCKVKE----- 444
           MS R G    L  ++ +VG      M   +          K +++L      V++     
Sbjct: 663 MSTRKGTAKFLDDILRDVGEKMHEVMKGNQAKYEQVEDPVKTADILGISAVMVQDMKGKR 722

Query: 445 --------------QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQES 489
                         +    P  Y+QYA+AR  SI+R+A    P + + DL   N+     
Sbjct: 723 INHYTFDMDRMTSFEGDTGP--YLQYAHARLCSIYRKATTADPSVAELDLSTANLSLLN- 779

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             +   ++L+  LA +P    N    QEP  +  YL+ +A      + H +       V 
Sbjct: 780 --EPHAIELVRQLASWPDTFLNTLKTQEPTTVLTYLFKMAHALSSSYDHLQ-------VV 830

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            + R + + RL L  A   ++N+G+ ++G+ SP E
Sbjct: 831 GSERDVMIARLALYVAARQVLNNGMRVLGL-SPVE 864


>gi|228985285|ref|ZP_04145448.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774440|gb|EEM22843.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 562

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 137/621 (22%), Positives = 251/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKLS-DPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +N+    +G     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDNEELEEDGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    +     + ++  +      V  +VG  +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A    EP  ++ Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+
Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|206975181|ref|ZP_03236095.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206746602|gb|EDZ57995.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 562

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 137/621 (22%), Positives = 251/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    +     + ++  +      V  +VG  +V F  L  KN  + + +F     +K 
Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFLLENMLKF 442

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAEKDS--RLALVY 541

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562


>gi|229138910|ref|ZP_04267489.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|228644535|gb|EEL00788.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 595

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 137/621 (22%), Positives = 251/621 (40%), Gaps = 101/621 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 35  DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 92  KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 149

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L       
Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 209

Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223
                           ++ ++ + + +++    EG     + K +  E  D+ + EL N 
Sbjct: 210 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 264

Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           F  E      + Y +          +A    + +D   +  +HD+    +          
Sbjct: 265 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 315

Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             ++ NL  +G      +PP         T     D    L+R    G D    ++  + 
Sbjct: 316 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 368

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387
           S  +      +F    + G+    +V G +H   G++ +       +S +K ++ +LL E
Sbjct: 369 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 417

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444
           ++    +     + ++  +      V  +VG  +V F  L  KN  + + +F     +K 
Sbjct: 418 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 475

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + +  P  YVQY +AR  SI R+    F    F L            D     ++  L +
Sbjct: 476 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 522

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P+VIE A    EP  ++ Y+ D+A  F+ ++ +      +R +  N  K +  RL LV+
Sbjct: 523 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAEKDS--RLALVY 574

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++  GL ++GVE+P EM
Sbjct: 575 AVTVVLKEGLRLLGVEAPEEM 595


>gi|255580290|ref|XP_002530974.1| arginyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529450|gb|EEF31409.1| arginyl-tRNA synthetase, putative [Ricinus communis]
          Length = 615

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 221/536 (41%), Gaps = 77/536 (14%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P+ + + I+  +     ++S  +AG GF+N+ LS  ++ + +  ++V+GIE     +  
Sbjct: 94  NPVAVGQAIMRNLPFSKMIESSSVAGPGFVNIVLSNKWMAENIQKMLVNGIETWAPKLSI 153

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V ++F S N    +HVGH R  ++GD+LA ++ FS  EV R  ++ D G Q   L  
Sbjct: 154 KRAV-VDFSSPNIAKELHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIE 212

Query: 180 SVFWRYQQALYNNDS--DLPEGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDY 236
            +F RY      N+   D  + +Y     +  +  E  ++    ++     +  P  +  
Sbjct: 213 FLFERYPNFEDVNECAIDNLQAFYKASKQRFDIDFEFKERAQKAVVRLQGGE--PKYRQA 270

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             Q +  I R +   +  +  + + E      +P  I  +I+ L +QG V E        
Sbjct: 271 WAQ-ICDISRREFDMVYQRLRVQLEEKGESFYNPY-IPGVIEALTQQGLVEES------- 321

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIY 354
                   +  +++F   + G D+    +KSDG Y Y + DLA  +++   E+  + +IY
Sbjct: 322 --------EGARVIF---IEGYDIPLIAVKSDGGYNYASTDLAALWYRLNEEKA-EWIIY 369

Query: 355 VM-------------GSDHSGYVKRLEAVAAAVS---------EKKAQINVLLCELVRL- 391
           V               +  +G++   + +   V+         E   +      E+VRL 
Sbjct: 370 VTDAGQNQHFEMVFKAAKRAGWLLSADNLYPKVTHVGFGVLKGEDGKRFRTRSTEVVRLV 429

Query: 392 -------YRDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDF-CK 441
                   R    +    +A ++    L    + VG  +V++  L  KN+ + D+ F   
Sbjct: 430 DLLDEAKMRSKTALIERGKAEEWTDDELEQTAEAVGYGAVKYADL--KNNRMTDYKFNFD 487

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                K N   Y+ YA+AR  SI R++     +L      +N      +    E  L +H
Sbjct: 488 QMLNDKGNTAVYLLYAHARICSIIRKSGRDIEEL------KNTTTLVLD-HADERSLGLH 540

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH------GRENPRLRFVQAN 551
           L  +   +E A I   P  L  YLY L+  F   +S+      G E  RL   +A 
Sbjct: 541 LLHFAETVEEACINLLPSVLCEYLYSLSEYFTKFYSNCQVVGSGEERSRLLLCEAT 596


>gi|194743500|ref|XP_001954238.1| GF18177 [Drosophila ananassae]
 gi|190627275|gb|EDV42799.1| GF18177 [Drosophila ananassae]
          Length = 570

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 204/513 (39%), Gaps = 105/513 (20%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V 
Sbjct: 113 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGVE 172

Query: 183 WRYQQALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFPEE------------- 227
                   NN SD      P   +Y  +V    A + S E+     +             
Sbjct: 173 -------LNNVSDKTMQTSPIETLYKAYVVANKAAEESPEITQQARDLFTALEAGTDEKM 225

Query: 228 --KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
             KW    + Y+++ + K+       L +  D +  E  + +     IR ++D +     
Sbjct: 226 AKKWQQ-YRQYTIEDLSKV----YSRLGVHFDSYEWESQYSQ---QQIRAVLDRM----- 272

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                         ++ D+  ++   R  ++ D    P++KSDGS  Y A D+A    + 
Sbjct: 273 --------------READLLHRESDGREIVIVDGRRIPVIKSDGSTLYLARDIAALLTRL 318

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +R  F  ++YV+ +  + +   L   A+++S++ +  N+   +  R++       MS R 
Sbjct: 319 DRFDFSRLLYVVDNGQADHFNALFKTASSLSDRLSLENLQHVKFGRIH------GMSTRQ 372

Query: 405 GDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELL 435
           G  I L+ V+DE                             +G  +V   +L ++     
Sbjct: 373 GTAIFLKDVLDEARDIMREKRNISATTKENTSFDDEHVCDILGVSAVLVNVLKQRRQRDY 432

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           DF++ K   Q   +    +QY + R  ++    K++  DL+      ++ P    F T  
Sbjct: 433 DFNW-KQALQVNGDTGIKLQYTHCRLNNLLENFKEV--DLE------DIKPSWDHFATEP 483

Query: 496 LQ---LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
           L+   L+  LA + + +  +    E   L  YL+ L +      +  R   RL   Q   
Sbjct: 484 LEALDLVYELARFDQNVWQSKEQLETCVLVNYLFGLCN------ATSRALKRLPVKQEAC 537

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R+    RL L HA    +  G+ I+G+   ++M
Sbjct: 538 RQKQSQRLLLFHAAKKTLQQGIQILGLRPLDQM 570


>gi|167625769|ref|YP_001676063.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083548|sp|B0TVV1|SYR_SHEHH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167355791|gb|ABZ78404.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 581

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG  +TN AM+L++  G +P  IA+L++  +     V+ V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDFATNLAMMLTKAAGKNPREIAQLLIDNLPESAHVEKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L  + ++    G  L    T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDNALANQL-MVALNSDHLGLELPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + F G++V R+ ++ D G Q   L
Sbjct: 147 VRALEFMGHKVIRQNHVGDWGTQFGML 173



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D   L  +   VG  SV++  L +  +    F F ++    + N   Y+ YAY R   IF
Sbjct: 419 DEAELAEIARVVGIASVKYADLSKNRASDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++A+D+      DL    +I +  +    E  L   LA++  V+       +P+ L  YL
Sbjct: 478 KRAQDV------DLSDATIILEHEK----EKDLGTKLAQFGEVMTRMVGKGQPHALCGYL 527

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++LA  F   +      P L      ++K    RL L    A  +  GLN++G+E+   M
Sbjct: 528 FELAGAFSSFY---EACPVLAAETEESKK---SRLLLSQLTAKTLKQGLNLLGLETLERM 581


>gi|83643984|ref|YP_432419.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|109894996|sp|Q2SMY0|SYR_HAHCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83632027|gb|ABC27994.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 578

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 237/587 (40%), Gaps = 89/587 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ L ++P  +A  ++  + +    + V IAG GFIN++LS  ++ + L
Sbjct: 37  GDYQANGVMGAAKALKMNPRELATKVLDVLDLGDMAEKVEIAGPGFINIFLSKDWMSQSL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              V++       L      V +++ + N    MHVGH R  ++GD +   + F G+ V 
Sbjct: 97  RQ-VLADPRLTIPLDSPKQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVI 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK---YSS 219
           R+ ++ D G Q   L       Y   L   +             + +  ELAD    Y  
Sbjct: 156 RQNHVGDWGTQFGML-----LAYMNKLKAENQ------------QTLSMELADLENFYRQ 198

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFIS--EDDFHRGDPSPIR 274
               F E+   P  KD + Q ++K+   D + +++     DI +   ED + R + S  R
Sbjct: 199 AKTCFDED---PEFKDSARQYVVKLQSGDQECVSLWKTFIDISLQHCEDVYERLNVSLTR 255

Query: 275 -DIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMVG-DDVDRPLL--KS 327
            D++   A     Y   LP       +K    + D  + +F     G DD   PL+  KS
Sbjct: 256 ADVMPESA-----YNEDLPNVIDDLREKGLLTNSDGAECVFMDEFKGKDDETLPLIVKKS 310

Query: 328 DGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383
           DG Y Y   DLA  + + ER    + ++Y + +  S ++ ++ A    A        +  
Sbjct: 311 DGGYLYATTDLAALRYR-ERVLKANRVLYFVDARQSLHLNQVYAAGRKAGFVSPDMSLEH 369

Query: 384 LLCELVRLYRDGMPIKM----SKRAGDFIT---------------------LRHVVDEVG 418
           +   +V L  DG P K     + +  D +T                     L  +   VG
Sbjct: 370 MAFGMV-LGADGKPFKTRDGGTVKLADLLTEAQGRAYAVVKGKNPEMPEEELNRIAHVVG 428

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  S    F F  +    + N   YVQYAY+R  ++F++ +      + D
Sbjct: 429 MAAVKYADLSKNRSSDYIFSFDAMLSL-EGNTAPYVQYAYSRVVNVFKKGEVGNLTFEGD 487

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L     I         E  L V L ++  ++ +      P+ L  YLYDL+  F   +  
Sbjct: 488 LQLAEPI---------ERALAVRLLQFNEILHSVASEGCPHILCGYLYDLSKEFASFYEG 538

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               P L+        +   RL L   +A  +  GL+++G+E+   M
Sbjct: 539 ---CPVLK----AEEPVRSSRLMLSLLIAKTLKQGLDLLGIETLERM 578


>gi|124024975|ref|YP_001014091.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166232821|sp|A2C016|SYR_PROM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123960043|gb|ABM74826.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 607

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 141/609 (23%), Positives = 241/609 (39%), Gaps = 114/609 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYL-SPSY 97
           G    N A+ L++ +   P  IA+ I  +++ D D     +   IAG GFINL + S + 
Sbjct: 47  GDFQINCALSLAKEINRPPRDIAQQIAKQLQQDNDFVRICNPPLIAGPGFINLSINSKTL 106

Query: 98  LRKI------------LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           + +I            L       IE  ++      +V I+F S N    MHVGH R  +
Sbjct: 107 ISEIHFRLNDKRLGVPLKKFNTDKIEEEKS----NNRVIIDFSSPNIAKEMHVGHLRSTI 162

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYY 201
           +GD+LA ++ F GYEV R  ++ D G Q   L   +     + L+  D    SDL   Y 
Sbjct: 163 IGDSLARVLEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYR 222

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                    +   +K  SE++N        ++   + Q +    R + + +  + DI ++
Sbjct: 223 QAKKRFDEDQIFQNKSRSEVVNLQAGDKESLI---AWQLLCNQSRKEFQKIYDRLDIKLT 279

Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           E    RG+      + D+I++L  +  +                     Q +F   +VG 
Sbjct: 280 E----RGESFYNKFLVDVINDLKNKKLLIND---------------QGAQCIFLDGLVGK 320

Query: 319 DVD-RPLL--KSDGSYTYFAADLAYFKCK-----YERGFDNMIYVMGSDHSGYVKRLEAV 370
           D   +P++  KSDG + Y   DLA  K +     +  G   +IYV  +  + +   +  +
Sbjct: 321 DGKPQPIIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQI 380

Query: 371 AAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
           A   +      QI  +   LV+   DG   K+  R+G+ I L  ++DE            
Sbjct: 381 AKLANWIPTDCQIEHVPFGLVQ-GEDGK--KLKTRSGETIRLVDLLDEAIQRARDDLKNR 437

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  S+++  L +       F F K+    + N   Y+ YA
Sbjct: 438 LNTESRSENENFIDKVSTTVGIASIKYADLSQNRISNYQFSFDKMLSL-QGNTAPYLLYA 496

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQ 516
             R   I R+  D+           NV  Q  +F+ S E  LI  L +   +I       
Sbjct: 497 LVRIAGISRKGGDL-----------NVSSQNIQFNESQEWDLIRKLLQLDSIIAEVEKEL 545

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P +L  YL++L+  F+  +    + P L+  + +       RL L    A  +  G+++
Sbjct: 546 LPNRLCGYLFELSQTFNRFYD---QVPILKASEPSR----ASRLVLCSITADTLKLGMSL 598

Query: 577 IGVESPNEM 585
           +G+ +   M
Sbjct: 599 LGIPTLERM 607


>gi|313680442|ref|YP_004058181.1| arginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313153157|gb|ADR37008.1| arginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 606

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 146/620 (23%), Positives = 249/620 (40%), Gaps = 109/620 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V E P D   G   T  A  L+R L   P  IA  +  RI+    V  V + G G++N +
Sbjct: 29  VQETPADKP-GDYGTPVAFQLARVLRKAPPRIAAELAERIEPPEGVARVEVVG-GYVNFF 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P++L +  +  V    +       +G KV +E  S NP   +HVGH R   +GD +A 
Sbjct: 87  LDPAWLARAAARPVEPAPK-------QGGKVLVEHTSVNPNKELHVGHLRNVALGDAIAR 139

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++ F+G  V    YI+D G Q    A S+F      L  + +   + +    Y++ + +E
Sbjct: 140 ILDFAGRRVEVLNYIDDTGRQS---AESLFALEHYGLTYDGAKKYDHWVGEAYVR-LHRE 195

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQA-MMKIIRDDLKA---LNIQHDIFISEDDFHRG 268
           + D+ +   L       L  ++   ++  + K++   L+    LN ++D+ + E D  R 
Sbjct: 196 MEDEEAKARLEPAIRAVLHRLEAGELRGEIEKLLTAQLETMWDLNAEYDVLVWESDLVR- 254

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LL 325
               ++  +  L +  YV      P + K      MD    +       + ++ P   LL
Sbjct: 255 -EGLLQRALALLEQTPYVSR----PTEGKYAGALVMDTSAFI-------EGMEDPYLVLL 302

Query: 326 KSDGSYTYFAADLA--YFKCKYERGFDNMIYV-MGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +SDG+ TY A D+A  ++K     G     +    S    Y    E         +  IN
Sbjct: 303 RSDGTATYTAKDIAFQFWKMGLLEGLRFRPFTRQPSGRELYTSHPEGEPMPFGNAQETIN 362

Query: 383 V------------------------------LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           V                              L  E V L  +G P  +S R G  +++  
Sbjct: 363 VIDVRQSYPQQVLKAALEAAGRHDLAEGAYHLAYETVLL--EGRP--LSGRKGHTVSVDE 418

Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           V++E                         VG  +VRF M+  +  + +DF + +     +
Sbjct: 419 VLEEAVRRARAVIAEKNPGLENADAVARMVGIGAVRFAMVKTEPKKQIDFRWDQAL-SFE 477

Query: 448 ENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            +   Y+QYA+AR  SI R  +A+ +    DFD       P E E       L   L  +
Sbjct: 478 GDAAPYLQYAHARAASILRKAEAEGLADAPDFD----RATPYEVE-------LAKVLLRF 526

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              ++ +   + P+ LA YL DLA+ ++ +++   +      V      L  +RL LV  
Sbjct: 527 EESVQKSAQLKTPHVLAQYLLDLAAAWNAYYNAKEDGRPATPVLTAPEGLRGLRLALVRR 586

Query: 566 VASIINSGLNIIGVESPNEM 585
           +   + +GL ++G+ +P  M
Sbjct: 587 LKQTVATGLGLLGIGAPEAM 606


>gi|328698412|ref|XP_001947348.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
           pisum]
          Length = 592

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 134/590 (22%), Positives = 252/590 (42%), Gaps = 102/590 (17%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKID-----PDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA+M + + L      ++  +VA+  +D       ++ V ++G+GFIN++LS + LR IL
Sbjct: 53  NASMQICKLLKAKGENVSPNVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDIL 112

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++ + ++     +    K+ ++F + N    MHVGH R  ++G++L+ +  F G++V 
Sbjct: 113 QYVLENKLK--PKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVL 170

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           R  +I D G Q   L   +    Q    N  ++ P    P   L+   K+    + S+ L
Sbjct: 171 RINHIGDWGTQFGMLIALL----QDKFPNYKTESP----PIKDLQQFYKQSKVLFDSD-L 221

Query: 223 NFPEEKWLPIVKDYS-----VQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
            F +  +  +VK  S     VQA   +  + R + + +  + +I I E    RG+    S
Sbjct: 222 EFKKRAYDCVVKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIE----RGESFYQS 277

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  ++ +L  +G++                  D +++++        +   ++KSDG +
Sbjct: 278 RMETVVKDLEDKGFLEND---------------DGRKIMWSPE---SSIPLTVVKSDGGF 319

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCE 387
           TY  +D+A  K +  E   D +IYV+ +  S + + L+  A     +   K +++ +   
Sbjct: 320 TYDTSDIATLKQRIEEEKADWIIYVVDAGQSLHFETLKKCAIHSGFLDPSKVRMDFVGFG 379

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS- 446
           +V L  D    K   R+GD + L  ++DE G    R  ++ +   ++L  +  K+ E + 
Sbjct: 380 VV-LGEDKK--KFKTRSGDTVRLASLLDE-GIKRTRDKLVEKGRDKVLTDEELKLAETAL 435

Query: 447 ----------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
                                       K N   Y+ YA  R RSI         DL+  
Sbjct: 436 AYGCIKYADLCHNRNHDYVFSFDKMLDDKGNTAVYLLYALTRIRSIINNLGTYTQDLNES 495

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +         S     E +L   L  +P VI   T     + L  YLYD+A+ F   + +
Sbjct: 496 I---------SLDHDKEWKLAKTLLRFPEVISKITDDFCLHHLCEYLYDVATTFSEFYDN 546

Query: 539 G---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +NP+   +     K+   R+ L    A  + +GLN++G+ + + M
Sbjct: 547 CYCIEKNPQTGEIV----KVFTGRILLCKVTAEYMETGLNLLGISTVSRM 592


>gi|87122857|ref|ZP_01078727.1| arginyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161868|gb|EAQ63163.1| arginyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 577

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 135/597 (22%), Positives = 228/597 (38%), Gaps = 110/597 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ L  +P   A+ ++  + +    D V IAG GFIN++L   ++   L
Sbjct: 37  GDYQANGMMGVAKKLKTNPREFAQKVLDLLDLSDVADKVEIAGPGFINIFLKNDWMSGAL 96

Query: 103 SSIVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +S+  S  ++  +  + K   + +++ S N    MHVGH R  V+GD +   + F G+ V
Sbjct: 97  ASLRKSARLDIAQ--VEKAQTIVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHNV 154

Query: 162 TREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYP 202
            R+ ++ D G Q   L                    L  F+R  +  +++D         
Sbjct: 155 VRQNHVGDWGTQFGMLLAYMERLRQENTEISMALSDLETFYRAAKTCFDDDEAFAARARE 214

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII----------------- 245
            V     G E       E +N   E      K   V    + +                 
Sbjct: 215 LVVSLQSGDEECLALWQEFINISLEHCEATYKTLGVSLTRENVMPESAYNDDLHNVVAAL 274

Query: 246 --RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +D L+  N    +F+ E     G+ +P   +I      G++Y                
Sbjct: 275 KEQDLLQESNGAQCVFMEEFANKEGEITP---VIVQKTGGGFLY--------------AT 317

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYT------YFAADLAYFKCKYERGFDNMIY--V 355
            D   L +R  ++  + DR L   D   +      Y     A F  K E   ++M +  V
Sbjct: 318 TDLAALRYRQDVL--NFDRGLYFVDARQSLHFQQIYTLGRKAGF-VKPETSLEHMPFGTV 374

Query: 356 MGSD------HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           MG+D       SG V +L  + A   ++  Q+              +  K  +   D   
Sbjct: 375 MGTDGKPFKTRSGTVAKLSDLLAEAQDRAYQL--------------VAEKNPEMEED--E 418

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQA 468
           LR++   VG  SV++  L +  +   D+ F      S E N   Y+ YAY+R  SI R++
Sbjct: 419 LRNIGRVVGIASVKYADLSKNRTS--DYVFNWDTMLSFEGNTAPYLLYAYSRVASIVRRS 476

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +    +L  D+         S  ++ E  L V L ++   ++       P+ L  YLY+L
Sbjct: 477 EIDVANLTGDI---------SLAESQERALAVKLMQFEEAVQQVANDGMPHNLCAYLYEL 527

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F   +      P L        +L   RLQL    AS +  GL+++G+E+   M
Sbjct: 528 AGTFMTFYEAC---PILN----AEDELKNSRLQLALNTASTLKQGLSLLGIETLERM 577


>gi|87123553|ref|ZP_01079404.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86169273|gb|EAQ70529.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 605

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 232/596 (38%), Gaps = 90/596 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ DP   ++     IAG GFINL L P  L
Sbjct: 47  GDFQANGALPLAKPLKQAPRQIASAIVEQLQADPSFSALCLEPVIAGPGFINLTLRPERL 106

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              ++   +     G   +     V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 107 AAEVAE-RLGDPRLGVPAVQGSAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 165

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217
           + V R  ++ D G Q   L   +     +AL   D+ DL               +L   Y
Sbjct: 166 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDL--------------GDLVAFY 211

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F +++         V  +       LKA  +  D   S  +F +     I D +
Sbjct: 212 REAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 264

Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKS 327
           D +L+ +G  +     EG++   ++      D D  + +F   + G D  +PL     KS
Sbjct: 265 DIHLSERGESFYNPYLEGVVTDLEAAGLLAVD-DGARCVFLEGVSGKD-GKPLPVIVQKS 322

Query: 328 DGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380
           DG + Y   DLA  + ++    D      +IYV  +  + +   +  VA  A       +
Sbjct: 323 DGGFNYATTDLAAIRYRFGGAPDGDGARRVIYVTDAGQANHFAGVFQVARRAGWVPDDGR 382

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           +  +   LV+   DG   K+  RAGD + LR ++DE                        
Sbjct: 383 LEHVPFGLVQ-GDDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLEEEGRSEDEAF 439

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+  
Sbjct: 440 IQHVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARKGG 498

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D+                 +E    E  L+  L  +  VI        P +L  YL++L+
Sbjct: 499 DLALAGAGAAAGSGSDLHFNE--PQEWALVRELLRFDAVIAEVEEELLPNRLCTYLFELS 556

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            VF+  +    + P L+   A  R     RL L    A  +  GL ++G+ +   M
Sbjct: 557 QVFNRFYD---QVPVLKAEGATLRS----RLALCRLTADTLKCGLGLLGIATLERM 605


>gi|294777538|ref|ZP_06742989.1| arginine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294448606|gb|EFG17155.1| arginine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 606

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 133/587 (22%), Positives = 233/587 (39%), Gaps = 129/587 (21%)

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSAN 131
           P++ S + A KGF+NL ++     ++L+SI  +  EYG   I K T+    V IE+ S N
Sbjct: 72  PELVSAYNAVKGFLNLTIASDCWIELLNSIQAAP-EYG---IEKATENSPLVMIEYSSPN 127

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P+H+GH R  ++G+ LA++M  +G +V +   +ND G  I    L+  W     L  
Sbjct: 128 TNKPLHLGHVRNNLLGNALANVMTANGNKVVKTNIVNDRGIHICKSMLA--W-----LKY 180

Query: 192 NDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE------------ 226
            + + PE          G Y   + KH     KEL  +Y +E LN  E            
Sbjct: 181 GNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAEANSPLM 240

Query: 227 -------EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDP 270
                   KW     D  ++A+ K + D          K + +  D I+   + +  G  
Sbjct: 241 LEAREMLRKWE--ANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESNTYLEGKE 298

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  +      +G+ Y       K   +   D+         T  G D  + LL+ DG+
Sbjct: 299 KVMEGL-----EKGFFYR------KEDNSVWADL---------TAEGLD-HKLLLRGDGT 337

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             Y   D+   K +++    + MIYV+G++ + + + L  +   +  +  +  V     +
Sbjct: 338 SVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGM 397

Query: 390 RLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLD--------- 436
               +G   KM  R G  +     +  +++     S     L     E  D         
Sbjct: 398 VELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIVGLG 454

Query: 437 -FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKD---IFPDLDFD 478
              +  +K  +++N  F              ++QY YAR +S+ R+A +   + P+    
Sbjct: 455 ALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVIPE---- 510

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +IP   E    E  LI  LA++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 511 -----IIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYHD 565

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  L + RL L   V  I+ + + ++G+E P  M
Sbjct: 566 ------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606


>gi|254286807|ref|ZP_04961760.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150423098|gb|EDN15046.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 599

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 135/615 (21%), Positives = 232/615 (37%), Gaps = 126/615 (20%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS  +L     + +   +  G       T V  ++ + N    MHVGH R  ++GD +  
Sbjct: 109 LSEEFLAAQAEAALAD-VRLGVAQEAPKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVR 166

Query: 153 LMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNND 193
            + F G++V R  +I D G Q   L                    L  F+R  + LY+ D
Sbjct: 167 TLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDED 226

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                             E A  Y  +L     F  E W  +V    +Q           
Sbjct: 227 EQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ----------- 261

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRK 307
                     ++ ++ R + S  R+ +   +    +Y  +LP   S    K    + D  
Sbjct: 262 ----------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGA 307

Query: 308 QLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
           Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S    +
Sbjct: 308 QVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQH 367

Query: 364 VKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           + +    A  +  K   I  NV L      + L +DG P K   RAG  + L  ++DE  
Sbjct: 368 LMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDEAQ 421

Query: 419 SDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NP 450
             +    ++  KN EL           +     K  + SK                  N 
Sbjct: 422 ERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNT 479

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   ++
Sbjct: 480 APYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQ 530

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +     +P+ +  YL++LA +F   +           + A    +   RL+L    A  I
Sbjct: 531 SVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAKTI 584

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+++   M
Sbjct: 585 KQGLALLGIDTLERM 599


>gi|39956339|ref|XP_364235.1| hypothetical protein MGG_09080 [Magnaporthe oryzae 70-15]
 gi|145016471|gb|EDK00901.1| hypothetical protein MGG_09080 [Magnaporthe oryzae 70-15]
          Length = 639

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 243/582 (41%), Gaps = 115/582 (19%)

Query: 75  DPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRN-LIG--------KGTK-V 123
           DP  +   + G  F+  +  P  L R ++  I   G +YG N  +G        KG K +
Sbjct: 102 DPLFEKPVVTGY-FLQFWFKPDPLTRNLIPLIRELGDDYGNNKRLGLKDPQDPSKGNKKI 160

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+ D G Q   LAL+ F 
Sbjct: 161 IVEFSSPNIAKPFHAGHLRSTIIGGFLANLYKGAGWDVQRINYLGDWGKQYGLLALA-FE 219

Query: 184 RY--QQALYNNDSDLPEGYYPGVYLKHVGKELAD--------KYSSELLNFPEEKWLPIV 233
           RY  ++AL  +    P  +   +Y+K +  E+++        K + E +   E+K L   
Sbjct: 220 RYGDEEALKKD----PINHLFQLYVK-INSEMSEEKEQIESKKKAGEDVTQLEQKSL--- 271

Query: 234 KDYSVQAMMKIIRDDLKALNIQ----HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            D   +A  K + D  +A   Q     D+ I     ++   + +    D  + +  V E 
Sbjct: 272 -DEQARAYFKKMVDGDEAAVAQWRRFRDLSIER---YKKTYARLNIWFDEYSGESQVTEE 327

Query: 290 ILPPPKS----KTTQKCDMDRKQLLFRSTMVGDD---VDRPLL-KSDGSYTYFAADLAYF 341
            +         K   K D     + F   + G +   ++RP++ K DG+  Y   D++  
Sbjct: 328 SMAKSAKTIADKGISKEDQGAVIIDFSEHVPGKEGKRLERPIIRKRDGTALYLTRDISEL 387

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             ++ER  FD MIYV+ S    ++K+L  +   +  K+       C+ +     GM + M
Sbjct: 388 LGRHERYNFDKMIYVVASQQDLHLKQLFKIVELMGHKEIADK---CQHINF---GMVLGM 441

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-------------SELLDFDFCKVKEQSK 447
           S R G    L  ++ +VG      M   RKN             +++L      V++ + 
Sbjct: 442 STRKGTVKFLDDILRDVGDKMHEVM---RKNDDKYSQVENPEAVADILGISSVMVQDMTG 498

Query: 448 E---NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-S 489
           +   N  F              Y+QYA+AR  SI R+A               + P+E +
Sbjct: 499 KRINNYTFDMDAMTSFEGDTGPYLQYAHARVCSIARKA--------------GLTPEELA 544

Query: 490 EFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
             D S LQ      L+  L+++P  ++N     EP  +  YL+ ++      + H     
Sbjct: 545 TADLSLLQEPHARQLVRMLSQWPDTVQNTYKTLEPTTVLTYLFRMSHALSQSYDH----- 599

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LR V  + ++L   R+ L  A   ++ +G+ ++G+     M
Sbjct: 600 -LRIV-GSEKELMKARMALYDATRIVLRNGMILLGLNPVERM 639


>gi|291166429|gb|EFE28475.1| arginine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 567

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 127/563 (22%), Positives = 230/563 (40%), Gaps = 86/563 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119
           P  IAE +V ++    + +S+  A  G+IN  ++   L K +   V+S  E YG++  GK
Sbjct: 53  PNLIAEDLVKQLPDTEEFESI-KAISGYINFTINKKLLAKQVIETVLSEKENYGKSDYGK 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V +E+ S N   P H+GH R  V+G  L  +    G+      ++ D G Q   L +
Sbjct: 112 HKNVIVEYSSPNIAKPFHIGHIRSTVIGHALDRIYQSVGFNTIAINHLGDYGTQFGKLIV 171

Query: 180 SVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-------WL 230
           +      +++   D  ++L + Y        V  EL D+         E+K       W 
Sbjct: 172 AFKKWGDRSVIEKDPINELLKLYVKFHEEAEVHSELEDEAREWFRKLEEDKDPEAVQLW- 230

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++D S++   K+       L I++D    E  +    P+    II++L     + +  
Sbjct: 231 QWIRDISLKEFDKV----YSMLGIEYDSLAGESFYSDKMPA----IIEHLENMNLLTD-- 280

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER- 347
                S+  +  D++   +             P L  K DGS  Y   DLA  K + +  
Sbjct: 281 -----SQGAKIVDLEEYGM------------PPALIKKKDGSTLYITRDLAAAKYRKDTY 323

Query: 348 GFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQINVL 384
            F   IYV+G+    + K+ + V                          +S +K ++ V 
Sbjct: 324 DFYKNIYVVGAPQELHFKQWKKVHELSGYDWANDCIHVAFGTVSLEEGVLSTRKGRV-VF 382

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L +++    +     + ++  +   L  V  +VG  ++ F  L   N+ + D+ F   + 
Sbjct: 383 LEDVLNKAIEKTKDIIQQKNPNLENLDEVAKQVGVGAIVFQEL--SNTRIKDYTFSWDRA 440

Query: 445 QSKENPVF-YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            + E     Y QY +ARC S+  +A  D+  D+DF +   N            +++I  +
Sbjct: 441 LTFEGETGPYTQYTHARCCSLLEKANVDLNTDIDFSILSTN---------NDAMKVIRIM 491

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           + +  V+       EP+ L  ++ D+   F+  +    +NP L      N K  +  L L
Sbjct: 492 SSFEDVLLRCAKKYEPHHLTRFVLDVCQAFNKFY---HDNPIL----TANEKEKIAYLSL 544

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V A   +I + L I+G+E+P +M
Sbjct: 545 VQASQIVIKNALWILGMEAPRKM 567


>gi|89898642|ref|YP_515752.1| arginyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|109894981|sp|Q253D1|SYR_CHLFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89332014|dbj|BAE81607.1| arginyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 562

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 171/397 (43%), Gaps = 60/397 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N AM L R L + P  IAE IV  +  D +  SV +AG GFIN   S  +L++ L
Sbjct: 38  GHYQCNDAMKLDRTLKMAPRAIAEAIVNNLPKD-NFSSVEVAGAGFINFTFSKEFLKQRL 96

Query: 103 ---SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
              S+ + SG       +    K+ I+F S N    MHVGH R  ++GD LA + +F G 
Sbjct: 97  ETFSADLSSGF-----CVKDPKKIVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFSFVGN 151

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG--KELADKY 217
           +V R  +I D G      A  +   Y Q   + D               VG  ++L   Y
Sbjct: 152 DVLRLNHIGDWGT-----AFGMLITYLQEEASED---------------VGNLEDLTALY 191

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-QHDIFISEDDFHRGDPSPIRDI 276
                 F E+      K  S   ++ +   D  ALN+ +H   ISE  F +     I DI
Sbjct: 192 KKAHARFAEDVEF---KKRSQANVVALQSGDPSALNLWKHICEISERAFQK-----IYDI 243

Query: 277 ID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDG 329
           +   + ++G   E    P   +  Q  D++ K+L+  S     +  +    PL+  KSDG
Sbjct: 244 LGVAIEKRG---ESFYNPFLPEIIQ--DLENKKLITVSDNAKCVFHEGFSIPLMVQKSDG 298

Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLL 385
            Y Y   DLA  + + E+   D +I V     S + + LEA A A     +K+   +V  
Sbjct: 299 GYNYATTDLAAMRYRVEKDHADKIIIVTDMGQSLHFQLLEATALAAGYLRDKETFSHVGF 358

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
                L  D    K   R+G+ I L+ +++     +V
Sbjct: 359 G----LVLDSEGKKFKTRSGENIKLKELLNTAVDQAV 391


>gi|67471201|ref|XP_651552.1| arginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56468302|gb|EAL46165.1| arginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
          Length = 573

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 227/534 (42%), Gaps = 107/534 (20%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118
           +P  +A  +  +IK +  +  V + G  F+N  ++ S L K IL+ +     ++G + +G
Sbjct: 56  NPSAVASKLAEQIKPNDIISKVTVTGP-FLNFAINKSALTKMILNQVAEEKEKFGGSTLG 114

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG  V +EF S N   P H GH R  ++G+ +A++    G+ V    ++ D G+Q   LA
Sbjct: 115 KGQNVIVEFSSPNIAKPFHAGHLRSTIIGNFIANIHKLLGFNVISMNWLGDWGSQFGLLA 174

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF------PEEKW 229
           +  F +Y  ++ L  N    P  +   VY+K +  K   D   ++  +F       +E +
Sbjct: 175 IG-FEKYGSEEELKRN----PIRHLYDVYVKINADKAKDDNVRAQGKDFFKHMEMGDEAY 229

Query: 230 LPIVKDYSVQAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           L   K +   A+     +DLK     LN+  D+F  E +    D   +  ++ +L  +G 
Sbjct: 230 LVKWKLFRSLAL-----EDLKKTYGRLNVSFDVFTGESE---TDWDLVGQVLKDLEAKGI 281

Query: 286 VYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YF 341
                     SK  + C   D+++ +L              L K DGS  Y   D+A   
Sbjct: 282 ----------SKMDKGCLIVDLEKYKLGI----------ALLKKDDGSTLYLTRDIASAI 321

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           K      F    YV+ +  + + K+L  +   +    A+     C  +     GM + MS
Sbjct: 322 KRHNTYSFSKCYYVVATQQTLHFKQLFKILELLGYSWAK----ECYHISF---GMVMGMS 374

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------------DFD 438
            R G  + L+ ++D+  +  +  M   +KN E +                       DF+
Sbjct: 375 TRRGTAVFLQDILDDAKATMLENM---QKNPEKISEIDENEREAVADKIGVSAVFVQDFN 431

Query: 439 FCKVK--EQSKENPVF-------YVQYAYARCRSIFRQAKDIFP---DLDFDLFPRNVIP 486
             ++K  E ++E           Y+QYA+ARC  + R++    P   +++F L       
Sbjct: 432 AKRIKDYEYNRERMTSFEGYTGPYLQYAHARCCGVERKSGIEIPKASEVNFSLLTE---- 487

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           +E+E       LI+++A++  VI N     EP  L  YL++L+ V    +S  R
Sbjct: 488 KEAE------NLIMNIAKFGDVIMNTYRNLEPNTLVSYLFELSHVIASAFSTLR 535


>gi|226491618|ref|NP_001148134.1| arginyl-tRNA synthetase [Zea mays]
 gi|194698640|gb|ACF83404.1| unknown [Zea mays]
 gi|195616022|gb|ACG29841.1| arginyl-tRNA synthetase [Zea mays]
          Length = 604

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 127/591 (21%), Positives = 230/591 (38%), Gaps = 141/591 (23%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P +I + I   +     ++S  +AG GF+N+ LS  ++ + +  ++V+GI+    ++  
Sbjct: 78  NPNSIGQAIAKNLPSSDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNGIKTWAPVLPV 137

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178
              V ++F S N    MHVGH R  ++GDTLA +  FS   V R  ++ D G Q   L  
Sbjct: 138 NRTV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGDWGTQFGMLIE 196

Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                              L +F++  +  +++D D       GV     G+   DKY  
Sbjct: 197 YLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQGGE---DKY-- 251

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                  E W  I           I R +   +  + ++ + E      +P  I  +++ 
Sbjct: 252 ------REAWKKIC---------DISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEE 295

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L+ +G + E                +  +++F   + G  +   ++KSDG + Y + DL 
Sbjct: 296 LSNKGLIKES---------------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLT 337

Query: 340 --YFKCKYERG--------------FDNMIY---------------------------VM 356
             +++   E+               FD M++                           V+
Sbjct: 338 ALWYRLNVEQAEWIIYVTDVGQQQHFD-MVFSAAKMAGWLPDPSEKKFPKTSHVGFGLVL 396

Query: 357 GSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           GSD   +       V+ +E +  A S  K+++      L RL  +G  +  +        
Sbjct: 397 GSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL------LQRLTENGKIVDWTDEE----- 445

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468
           L    + VG  +V++  L  KN+ L ++ F   +  S K N   Y+QYA+AR  SI R++
Sbjct: 446 LEQTSEAVGYGAVKYADL--KNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKS 503

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                +L          P E         L ++L  +  V+E A     P  +  YLY+L
Sbjct: 504 NKNVEELKMSGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVVCEYLYNL 556

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +F   +++          Q         RL L  A A ++    N++G+
Sbjct: 557 SEMFTKFYTN---------CQVVGSPEETSRLLLCQATAVVMRQCFNLLGI 598


>gi|194894171|ref|XP_001978023.1| GG19367 [Drosophila erecta]
 gi|190649672|gb|EDV46950.1| GG19367 [Drosophila erecta]
          Length = 664

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 138/593 (23%), Positives = 246/593 (41%), Gaps = 93/593 (15%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ L   G+   P  IA  +       P ++ + IAG GF+N++LS  Y
Sbjct: 115 GDYQCNNAMGLSKKLKEKGISKAPRDIATELKGHCPPSPLIEKLEIAGAGFVNVFLSKDY 174

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               LS+++  G+E       K  +V ++F S N    MHVGH R  ++G++L  L+ F 
Sbjct: 175 AASALSNLLRYGVEPPEV---KKRRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 231

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
            ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E   
Sbjct: 232 QHDVIRTNHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 291

Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
           +  S +++   +K +P  +K + +  +  + R + + +  + DI I E    RG+    S
Sbjct: 292 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISIKE----RGESFYQS 343

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +++ L  +G + E              D  RK +    T  G  +   ++KSDG +
Sbjct: 344 RMLSVVEYLRGKGLLEE--------------DEGRKIMWPDDTKTG--IPLTIVKSDGGF 387

Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-- 388
           TY  +D+A  + + E    D +IYV+ +  S +   +   A    E+   +N L   +  
Sbjct: 388 TYDTSDMAAIRYRLEEELCDWIIYVVDAGQSTHFNTIFKAA----ERSTILNPLTHRVDH 443

Query: 389 ----VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWRKNSE 433
               V L  DG   K   R+GD + L  ++DE            G D V      +   E
Sbjct: 444 VQFGVVLGEDGK--KFKTRSGDTVKLADLLDEGLKRSLLQLESRGRDKVLTPQELKDAQE 501

Query: 434 LLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            L +      D C  +            + + N   Y+ Y Y R  SI R   + F +L 
Sbjct: 502 SLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNCGEDFSNLP 561

Query: 477 FDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             L   N V+  E E+  ++  L +H      ++   +     + L  + +++ +VF   
Sbjct: 562 EILKKTNIVLAHEKEWKLAKTLLKLH-----DILIKCSKELFLHFLCEFCFEVCTVFTEF 616

Query: 536 WSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +N +   +  N+      R+ L  A A+++     I+G++  ++M
Sbjct: 617 YDSCYCIEKNKQGDIIAVNHS-----RILLCEATAAVLRQCFYILGLKPVSKM 664


>gi|258626716|ref|ZP_05721540.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581012|gb|EEW05937.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 597

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 130/612 (21%), Positives = 236/612 (38%), Gaps = 120/612 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 47  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G+ V R  +I D G Q   L                    L  F+R  + 
Sbjct: 160 DAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGQISMELSDLEAFYRESKK 219

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   +++  +  + E  ++  D  P+  I+ +L  +G   E                D
Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303

Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S   
Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE    
Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 421

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  V   +V++  L +  +    FD+  +    + N   Y
Sbjct: 422 AKALIKSKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 480

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   +++  
Sbjct: 481 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 531

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P+ +  YL++LA +F   +      P L   Q N ++    RL+L    A  I  G
Sbjct: 532 REGQPHIMCSYLFELAGIFSSFY---EACPILVAEQENVKQ---SRLKLAALTAKTIKQG 585

Query: 574 LNIIGVESPNEM 585
           L ++G+E+   M
Sbjct: 586 LALLGIETLERM 597


>gi|219684333|ref|ZP_03539277.1| arginyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672322|gb|EED29375.1| arginyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 585

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 147/618 (23%), Positives = 256/618 (41%), Gaps = 96/618 (15%)

Query: 11  LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +KN +  I   + + K I LD+I I  ++P     G +S      LS+ L L   TI+E 
Sbjct: 9   IKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLELPIATISEE 67

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I+  +K   ++     A   ++N+ +    Y+   +  +      YG +      K+ +E
Sbjct: 68  IIKTLKAKYEIK----AMGPYLNIKIPRKEYINNTIQMVNAQKDSYGTSKYLDNKKIILE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWR 184
           F S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I  + LA   F  
Sbjct: 124 FSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGN 183

Query: 185 Y---QQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               ++A    D  + E Y    Y K+  + E A+K   +LL   E+K    +K +    
Sbjct: 184 DITPEKAFKKGDHLIGEFYIE--YNKYSQENENAEKEIQDLLLKWEQKDANTIKLWEKLN 241

Query: 241 MMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPP 293
              I  I++  K  NI  D I++  + F  G     ++++     +G+ Y+     I   
Sbjct: 242 KWAIEGIKETYKITNISFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICID 296

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
             S + +K +   KQ             + L++S+G+  Y   DL     +  E  FD M
Sbjct: 297 LPSDSDEKAEAKAKQ-------------KVLIRSNGTSIYLTQDLGNIAIRTKEFNFDEM 343

Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IYV+GS+   + K L  V+  +   K  Q+  L   +V L  DG   KM  R G+ I   
Sbjct: 344 IYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLI-DG---KMKSREGNVIDGD 399

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ E                         +   ++ + +L  K++   D  F K +  S
Sbjct: 400 NLISELIESIMPEITQKIDNKESAQKNALNIALGAIHYYLL--KSAVHKDILFNKKESLS 457

Query: 447 -KENPVFYVQYAYARCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
              N   Y+QY  AR  SI  +    +  I   ++F+L               E ++I  
Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPIIKKINFELLKH----------EKEWEIIKI 507

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           ++E    I  A     P  LA Y Y LA  F  ++         + +  NN  LT  R++
Sbjct: 508 ISELEETIIKAAKDLNPSILANYSYSLAKHFSAYYQEA------KVIDINNTDLTAARIE 561

Query: 562 LVHAVASIINSGLNIIGV 579
            + A+   I + ++++ +
Sbjct: 562 FLKAILQTIKNCMHLLNI 579


>gi|77359609|ref|YP_339184.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|109895020|sp|Q3IHI4|SYR_PSEHT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76874520|emb|CAI85741.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 580

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 140/610 (22%), Positives = 245/610 (40%), Gaps = 81/610 (13%)

Query: 22  IKVEKKILDRIVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           I VEK I     +  P D             G    NAAM  ++ +  +P  +A+ I+  
Sbjct: 6   ILVEKAIAAMTTVGLPADTNPAVTQSTRPQFGDYQINAAMGAAKKMKSNPRELAQKIIDN 65

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           + +    +   IAG GFIN++L P +L + + +   S  +   N      KV +++ S N
Sbjct: 66  LDVSDIAEKTEIAGPGFINIHLKPEFLAQSVKA-ANSDAKLAVNEHANPQKVVVDYSSPN 124

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
               MHVGH R  ++GD +   + F G  V R+ ++ D G Q   L   +  +  Q +  
Sbjct: 125 LAKEMHVGHLRSTIIGDAIVRALEFRGDSVVRQNHMGDWGTQFGMLIAHLEDQISQGV-- 182

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D D         + +   K   D+       F ++    +VK     A  + +     A
Sbjct: 183 -DLDTVALADLETFYRDAKKRFDDEEG-----FADKARNYVVKLQGGDAHCEKLWKLFIA 236

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQL 309
            +++H    SE+ + R + +  +   D +A   Y  E   I+   K K     +    Q+
Sbjct: 237 TSVKH----SEEVYKRLNVTLTQ--ADIMAESAYNAELNDIISLLKDKNI-AVESQGAQV 289

Query: 310 LFRSTMVGDDVDRPLL---KSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGY 363
           +F   +   D +       KS G + Y   DLA   C Y     G D ++  + +  S +
Sbjct: 290 VFLDELANKDGEPSAFIVQKSGGGFLYATTDLA--ACDYRSNKLGADRILIFVDARQSLH 347

Query: 364 VKRLEAVAAAVS------------------------EKKAQINVLLCELVRLYRDGMPIK 399
             ++E  A                            + +    V L +L+    +   IK
Sbjct: 348 FNQVELTARKAGFLRDETSYEFCPFGTMMGADNKPFKTRTGGTVKLADLLEESINRAAIK 407

Query: 400 MSKRAGDFITLR--HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQY 456
           +++R  D        +  +VG  +V++  L +  +    F++   +  +    P  Y+QY
Sbjct: 408 LAERESDLSEQERSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSFEGATAP--YLQY 465

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           AY R RSIFR++      +D      NV   E +     L+L+        +I  AT   
Sbjct: 466 AYTRIRSIFRKS-----GVDAATLNSNVTIVEPQEKALALKLLQLEEVLDLMITEAT--- 517

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLR-FVQANNRKLTMMRLQLVHAVASIINSGLN 575
            P+ L  YLY+LAS++   +      P L+  V+ N R     RL L + V+  + +GL+
Sbjct: 518 -PHVLCGYLYELASLYMTFY---EACPVLKEGVEPNVRD---SRLVLCNLVSKTLETGLD 570

Query: 576 IIGVESPNEM 585
           ++G+E   +M
Sbjct: 571 LLGIEVMEQM 580


>gi|332532695|ref|ZP_08408571.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037911|gb|EGI74360.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 580

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 236/583 (40%), Gaps = 79/583 (13%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    NAAM  ++ +  +P  +A+ I+  + +        IAG GFIN++L P +L + +
Sbjct: 37  GDYQINAAMGAAKKMKSNPRELAQKIIDNLDVSDIAQKTEIAGPGFINIHLKPEFLAQSV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +   +  +   N   K  KV +++ S N    MHVGH R  ++GD++   + F G  V 
Sbjct: 97  KA-ANNDAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDSIVRALEFRGDTVV 155

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL 221
           R+ ++ D G Q   L                + L +    GV L  V   +L   Y    
Sbjct: 156 RQNHMGDWGTQFGMLI---------------AHLEDQISQGVDLDTVALADLETFYRDAK 200

Query: 222 LNF-PEEKWLPIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             F  EE +    +DY V+        + L  L I   +  SE+ + R + +  +   D 
Sbjct: 201 KRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQ--ADI 258

Query: 280 LARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTYF 334
           +A   Y  E   I+   K K     +    Q++F   +   D +       KS G + Y 
Sbjct: 259 MAESAYNAELNDIISLLKDKNI-AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYA 317

Query: 335 AADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390
             DLA   C Y     G D ++  + +  + +  ++E  A      + + +   C     
Sbjct: 318 TTDLA--ACDYRSNKLGADRILIFVDARQNLHFNQVELTARKAGLLRDETSYEFCPFGTM 375

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------ 438
           +  D  P K   R G  + L  +++E  S +     L  + S+L D D            
Sbjct: 376 MGADNKPFKT--RTGGTVKLADLLEE--SINRAAAKLAERESDLSDSDRSEIARKVGIGA 431

Query: 439 --FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
             +  + +    + +F              Y+QYAY R RSIFR++      L+ D+   
Sbjct: 432 VKYADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAATLNSDVAI- 490

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            V PQE       LQL   L     +I  AT    P+ L  YLY+LAS++   +      
Sbjct: 491 -VEPQEKALALKLLQLEEVL---DLMISEAT----PHVLCGYLYELASLYMTFY---EAC 539

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L+  +     +   RL L + V+  + +GL+++G+E   +M
Sbjct: 540 PVLK--EGVEPSVRDSRLVLCNLVSRTLETGLDLLGIEVMEQM 580


>gi|313884321|ref|ZP_07818083.1| arginine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620399|gb|EFR31826.1| arginine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 563

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 139/599 (23%), Positives = 243/599 (40%), Gaps = 108/599 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P +  HG L+      L++     P  IA+ +V +I      D V   G  +IN +
Sbjct: 27  LIEKPSNAEHGDLAF-PVFQLAKAFRKAPNLIAQELVEKID-GAHFDKVEAVGP-YINFF 83

Query: 93  LS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+      +I+S ++     YG   +G G  V +++ S N   PM +GH R  V+G++L 
Sbjct: 84  LNRKEKSNEIISQVIKEDSHYGEVDLGHGGTVVLDYSSPNIAKPMSMGHLRSTVIGNSLD 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVG 210
            +     Y+     ++ D G Q   L ++      +A    D   P      +Y++ H  
Sbjct: 144 LMHQKMNYKTVSVNHLGDWGTQFGKLIVAYKGWGDEATVRKD---PVNELVKLYVEFHEK 200

Query: 211 KE----LADKYSSELLNF----PE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            E    L D+  +         PE  E W    KD S++   K+   DL  ++  H  + 
Sbjct: 201 SEEDPSLEDQGRAAFKKLEDGDPEMTELW-TWFKDESIKEFEKVY--DLMGISFDH--YT 255

Query: 261 SEDDFHRGDPSPIR-------DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            E  ++      ++         ++N A   Y+ +  LPP               L+ RS
Sbjct: 256 GESFYNDKMEDKLQILADKGISTVENGATLVYLDDEELPPA--------------LVKRS 301

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV- 370
                         DG+  Y   D+  AY++ K    F   +Y++G++ + + ++L+A+ 
Sbjct: 302 --------------DGATLYITRDIATAYYR-KETYNFVKSLYIVGNEQANHFRQLKAIL 346

Query: 371 ----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                                    +S +K +I VLL  ++    +    ++  +  D  
Sbjct: 347 KRMGNDWSDDMVHIAFGLITLEGKKLSTRKGKI-VLLEAVMNEAMELALEQIEAKNPDLE 405

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ 467
               V  +VG  +V F  L        DF   +V + + +  P  YVQY YAR +S+  +
Sbjct: 406 NKEEVARQVGVGAVIFHDLKSDRMNSFDFKLSEVVQFEGETGP--YVQYTYARAKSLLEK 463

Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
             K++  D  ++L            D     +I  LAEY   +  AT   EP  +A Y+ 
Sbjct: 464 YGKELKADEIYEL-----------TDEYAWAVIKKLAEYSDTLVAATEKYEPSMIARYVI 512

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  F+ ++     N RL     N+      R+ LV A + ++  GL+++GVE+P  M
Sbjct: 513 QLAQAFNKYYG----NVRL----LNDDDQLAARMALVKATSIVLKDGLSLLGVEAPENM 563


>gi|119953378|ref|YP_945587.1| arginyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782944|sp|A1R025|SYR_BORT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119862149|gb|AAX17917.1| arginyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 584

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 149/624 (23%), Positives = 256/624 (41%), Gaps = 103/624 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           D  +++   +KE+  K  +    LD+I  ++++P     G LS       S+ L L    
Sbjct: 8   DLENKISKTIKELALKQNI---TLDKINIIMKKPPKSELGDLSI-LIFEFSKILKLSTSV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           I E I+ +I       S+      ++N+  +   Y++ I+  +     +YG N + K  +
Sbjct: 64  IIEEIIKQIGKKYTTKSM----GAYLNIKFNRKEYIKDIIKKVNEQKEKYGINNVLKNKR 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + IEF S N   P+HVGH R  ++G++L+ ++  SG +VT+   IND G  I    L+  
Sbjct: 120 IIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGGQVTKINLINDRGTHICKTMLA-- 177

Query: 183 WRYQQALYNNDSDLP----EGYYPGVYLKH----VGKELADKYSSELLNFPEEKWLPIVK 234
             Y++   N   +L     +      Y+K+       ++A+    +LL   EE     VK
Sbjct: 178 --YKKFGNNTTPELSLKKGDHLIGDFYVKYNEYAKNNKMAEDEIQQLLCKWEEGDEETVK 235

Query: 235 DYSVQAMMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE--- 288
            +       I  I++  K  NI  D I++  + F  G     R+II     +G  Y+   
Sbjct: 236 LWKKLNKWAIEGIKETYKLTNITFDKIYLESEIFKIG-----REIILQGLEKGLCYKRED 290

Query: 289 -GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYE 346
             I      +T +  D   KQ             + LL+++G+  Y   DL      K E
Sbjct: 291 GAICINIPIETNEMTDQKFKQ-------------KVLLRANGTSIYLTQDLGNILTRKNE 337

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--GMPI-KMSKR 403
             FD MIYV+GS+   + K L  VA  +   K         LV L      +P  KM  R
Sbjct: 338 FDFDEMIYVVGSEQIHHFKTLFYVADKLGITKEN------NLVHLSYGMVNLPTGKMKSR 391

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSE----------------------LLDFDFCK 441
            G  I   +++ ++ S+S    +  R ++E                       +  D   
Sbjct: 392 EGHVIDADNLIHDL-SESTMIEIKKRHSNEQDSKKIALNISLGAIHYYLLKTAIHKDILF 450

Query: 442 VKEQS---KENPVFYVQYAYARCRSIFRQAKDI-FP--DLDFDLFPRNVIPQESEFDTSE 495
            KE+S     N   Y+QY  AR  SI  +  ++  P  +++FDL            + +E
Sbjct: 451 NKEESLSFTGNSGPYIQYVGARINSILDKYDELNLPSKNINFDLL----------INENE 500

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             +I  ++E+   I  A   + P  +  Y Y LA  F  ++         + +  +N +L
Sbjct: 501 WAIIKIISEFEEYIIKAAKDRNPSIIVNYSYLLAKSFSAYYQDT------KIIDKDNPEL 554

Query: 556 TMMRLQLVHAVASIINSGLNIIGV 579
           T  R  L  AV   I + ++++ +
Sbjct: 555 THARTDLSKAVLQTIKNCMHLLNI 578


>gi|330996517|ref|ZP_08320399.1| arginine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329573073|gb|EGG54692.1| arginine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 599

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 130/568 (22%), Positives = 235/568 (41%), Gaps = 98/568 (17%)

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134
           P V + F A KGF+NL ++P+    +L+ I     ++G          V IE+ S N   
Sbjct: 72  PSVVADFNAVKGFLNLVIAPASWIGLLTDIHQDA-QFGLTEATDHSPLVMIEYSSPNTNK 130

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R  ++G  LA++MA +G  V +   +ND G  I    L+ + +Y        +
Sbjct: 131 PLHLGHVRNNLLGCALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLKYGNGATPEST 189

Query: 195 DLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-- 248
            +   +  G Y     KH  +++ +     +     +   P++K+ + + ++K   +D  
Sbjct: 190 GIKGDHLIGDYYVAFDKHYKEQIKELMEGGMSEEEAKNEAPLIKE-AREMLVKWENNDPE 248

Query: 249 LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMD 305
            +AL   +   ++   D  ++     +    D +  +   Y EG     K K  +  D  
Sbjct: 249 TRALWRKMNEWVYAGFDVTYKA----LGVSFDKIYYESETYLEG-----KEKVLEGLD-- 297

Query: 306 RKQLLFRS---------TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
            K L FR          T  G D ++ LL+SDG+  Y   D+   K ++ +   D MIYV
Sbjct: 298 -KGLFFRKEDGSVWADLTPEGLD-EKLLLRSDGTSVYMTQDIGTAKLRFRDYPIDKMIYV 355

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G++ + + + L  +   +  +  +  V     +    +G   KM  R G  +    +V 
Sbjct: 356 VGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPNG---KMKSREGTVVDADDLVA 412

Query: 416 E------------------------------VGSDSVRFMML---WRKN-----SELLDF 437
           E                              VG  ++++ +L    RKN     +E +DF
Sbjct: 413 EMIGSARKMSEDKINKLTDLSEDEANEIARIVGLGALKYFILKVDARKNMLFNPAESIDF 472

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           +          N   ++QY YAR RSI R+A +    +     P  +  Q ++    E+ 
Sbjct: 473 N---------GNTGPFIQYTYARIRSILRKASESGISI-----PETLSAQ-TDLSEKEIS 517

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  LA++P V++ A     P  +A Y YDL   ++  +           +   +     
Sbjct: 518 LIQMLADFPNVVKQAGSDYNPSCIANYCYDLVKEYNQFYHD------FSILHEEDENKKT 571

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L   ++ II +G+ ++G+E P  M
Sbjct: 572 FRLVLSAEISRIIRTGMGLLGIEVPERM 599


>gi|170728748|ref|YP_001762774.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688680|sp|B1KK48|SYR_SHEWM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169814095|gb|ACA88679.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 581

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D  HG  +TN AM+L++    +P  IA+LI+  +  D  V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKTHGDFATNLAMMLTKIARKNPREIAQLIIDSLPEDAQVSKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
            ++  S     L++ +++ +   R  I   +   V +++ S N    MHVGH R  ++GD
Sbjct: 89  FFIDDS----ALANQLMTALNDDRLGIALPQAQTVVVDYSSPNLAKEMHVGHLRSTIIGD 144

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTL 177
           ++   + F G++V R+ ++ D G Q   L
Sbjct: 145 SVVRALEFMGHKVIRQNHVGDWGTQFGML 173



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D   L  +   VG  SV++  L +  +    F F ++    + N   Y+ YAY R   IF
Sbjct: 419 DEAELAKIAKVVGISSVKYADLSKNRASDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++A D+      DL    +  +  +    E +L   LA++  V+       +P+ L  YL
Sbjct: 478 KRATDV------DLSDAKIQLEHEK----EKELGTKLAQFNEVLTRMVSKGQPHALCGYL 527

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++LA  F   +           + A+  +    RL L    A  +  GL ++G+E+   M
Sbjct: 528 FELAGAFSSFYEA------CPVLAADTEEQKKSRLLLAKLTAKTLKQGLGLLGIETLERM 581


>gi|331001659|ref|ZP_08325182.1| arginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413380|gb|EGG92747.1| arginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 589

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 135/611 (22%), Positives = 240/611 (39%), Gaps = 115/611 (18%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA  +V  +K +   + +     GFIN+ +S 
Sbjct: 33  RPDLCEY---QCNGAMAAAKEYQKKPIDIANEVVEILKDNDSFEKIEAIMPGFININISN 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            ++ K +  +  +  +YG  L     K+ I++  AN   P+H+GH R A++G++L  L  
Sbjct: 90  DFIEKYMKDMSAAP-KYGIELDNPSKKIIIDYGGANVAKPLHIGHLRSAIIGESLKRLGR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202
           F G EV  + ++ D G Q+  +   +  R  + +Y   N D + P          E  YP
Sbjct: 149 FFGNEVIADVHLGDWGLQMGLIIEELRERNPELVYFKENYDGEFPKEAPFTLNDLEEIYP 208

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK----ALNIQHDI 258
               K    E   + + E     +  + P  + +  Q +M +  +DLK    +L +  DI
Sbjct: 209 AASKKSKTDEEFKQRAQEATLALQSGYRPYREIW--QHIMNVSVEDLKKNYSSLLVDFDI 266

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D     P  I+D+ D   +   V EG                   L+    M GD
Sbjct: 267 WKGESDADPYIPDLIKDLEDR--KIAGVSEG------------------ALVVDIAMEGD 306

Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD---HSGYVKRLEAV 370
             + P   + KSDG+  Y  +DL     + E+ +  D  IY+       H     R+  +
Sbjct: 307 KKELPPCIIRKSDGAALYATSDLGTL-IEREKLYSPDEYIYIADKRQELHYTQFFRVSRI 365

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A  V +      +    +    +DG P+K   R G  + L  V+ ++  D+V        
Sbjct: 366 AGIVPDNHELKYIGFGTING--KDGKPLKT--RDGGVVRLETVIKDI-EDAV-------- 412

Query: 431 NSELLDFDFCKVKE------QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLD-FDLFPR 482
                   F K+KE      +   N    V  A  +   +  QA KD   D+D F  F  
Sbjct: 413 --------FAKIKESRDISDEEARNTAKIVGLAAIKYADLSNQATKDYIFDIDRFTSFEG 464

Query: 483 NVIP----------------QESEFDTSEL------------QLIVHLAEYPRVIENATI 514
           N  P                 ES  +   L            +L + LA Y  ++  A  
Sbjct: 465 NTGPYILYTIVRIKSILEKYYESGSEKVSLNDLTVPKEDIHKKLYMELAGYNEIMRAAWT 524

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+K+  ++Y +++ F+  +        ++ +  +N       L  +     ++ + +
Sbjct: 525 ELAPHKICQFIYSVSNTFNSFYHE------IKILSESNETKKKGYLATILLTKELLEAAI 578

Query: 575 NIIGVESPNEM 585
           +++G+E+PN+M
Sbjct: 579 DLLGIEAPNKM 589


>gi|319760579|ref|YP_004124517.1| arginyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039293|gb|ADV33843.1| arginyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 582

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 241/596 (40%), Gaps = 104/596 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  + +S+ L +     ++ ++  I +   V+ +     GFIN++LS +++    
Sbjct: 38  GDYQINGLIPISKLLNISVENFSKKLIKFINLQHMVEIIKFEQPGFINIFLSSTWIE--- 94

Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
                + I Y  NL   G        + I++   N    MHVGH R  V+GD+ A +++F
Sbjct: 95  -----NQINYIGNLPNFGIYSKQQKTIIIDYSGPNIAKEMHVGHLRSTVIGDSTARILSF 149

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN------NDSDLPEGYY---PGVY-L 206
            G+ V +  +I D G Q   L   + + ++Q  +N         D+ E YY     +Y +
Sbjct: 150 LGHHVIKANHIGDWGTQFGML---IAYIHKQIPHNFSLNKIQSFDVLEKYYQEAKKIYDI 206

Query: 207 KHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNI---QHDIFI 260
                +LA  Y  +L     + ++ W  +V + SV    K+       LNI   + DI +
Sbjct: 207 DPNFAKLARHYVVKLQQGDGYCKKIWQHLV-NISVSNNQKL----YNRLNITLKKSDI-M 260

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  +    P  +RD+ +         + I     + T    + D+K   + S  V    
Sbjct: 261 GESMYQNMLPHIVRDLKN---------KKIAVTSNNATVVFLNKDQKNEYYSSFGV---- 307

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
              + K DG Y Y   D+A  K + E    D +IY   S    ++ +   +A  A    K
Sbjct: 308 --IIQKKDGGYLYSTTDIACIKYRCEILHADRIIYYTDSRQKQHLLQAWKIAHKAGYIPK 365

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                  +C ++ L ++  P +   RAG+ + L  +++E    +    +++RKN  L D 
Sbjct: 366 SVSFEHHICGMI-LQKNRKPFQT--RAGNVLKLTTLLNEAFKKAHD--LIYRKNPNLEDI 420

Query: 438 DFCKV-----------KEQSKE-----------------NPVFYVQYAYARCRSIFRQAK 469
              K+            E SK                  N   Y+QYAY R  SI ++  
Sbjct: 421 KLNKLAHIISIGAIKYTELSKNRSTNYIFNWDTMLNFNGNTALYIQYAYTRIFSILKKTG 480

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
              P+L  + +   +I ++ +       L   L ++  +IE       P+ L  YLY L+
Sbjct: 481 Q--PNLKKNKYKIQIITKKEKL------LATCLLQFNEIIEIIADQGTPHLLCNYLYKLS 532

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++F   +           ++  N  L   RL+L    A I+  GL ++G+E+   M
Sbjct: 533 ALFSSFYE------SYPILETKNIHLQHSRLKLSLFTAHILKQGLELLGIETSEYM 582


>gi|262166185|ref|ZP_06033922.1| arginyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025901|gb|EEY44569.1| arginyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 597

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 127/612 (20%), Positives = 234/612 (38%), Gaps = 120/612 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 47  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 160 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKK 219

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   +++  +  + E  ++  D  P+  I+ +L  +G   E                D
Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303

Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S   
Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE    
Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 421

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  V   +V++  L +  +    FD+  +    + N   Y
Sbjct: 422 AKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 480

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   +++  
Sbjct: 481 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 531

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P+ +  YL++LA +F   +           + A    +   RL+L    A  I  G
Sbjct: 532 REGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESVKQSRLKLAALTAKTIKQG 585

Query: 574 LNIIGVESPNEM 585
           L ++G+E+   M
Sbjct: 586 LALLGIETLERM 597


>gi|260436601|ref|ZP_05790571.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414475|gb|EEX07771.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 590

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 220/545 (40%), Gaps = 93/545 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ DP    +     IAG GFINL + P  L
Sbjct: 40  GDFQANGALPLAKPLKQAPRQIASAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERL 99

Query: 99  RKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +S+ +  G E  G   +     V ++F S N    MHVGH R  ++GD+LA ++ F 
Sbjct: 100 AAEVSARL--GDERLGVPAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFR 157

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216
           G+ V R  ++ D G Q   L   +     +AL   D+ DL +      + +   K   D 
Sbjct: 158 GHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLV---AFYREAKKRFDDD 214

Query: 217 YSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP--S 271
            + +  +  E   L      S++A   +    R + + +  + DI +SE    RG+   +
Sbjct: 215 EAFQSTSRDEVVKLQGGDPVSLKAWGLLCAQSRREFQKIYDRLDIRLSE----RGESFYN 270

Query: 272 P-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LK 326
           P +  +ID L              K+      D D  Q +F   M G D  +PL     K
Sbjct: 271 PFLPAVIDGL--------------KAAELLVTD-DGAQCVFLEGMQGKD-SKPLPVIVQK 314

Query: 327 SDGSYTYFAADLAYFKCKY-----ERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKA 379
           SDG + Y   DLA  + ++       G   ++YV  +  + +   +  VA  A      A
Sbjct: 315 SDGGFNYATTDLAAIRYRFGVAPEGDGARRVVYVTDAGQANHFAGVFQVAERAGWIPDGA 374

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           ++  +   LV+   DG   K+  RAGD + LR ++DE                       
Sbjct: 375 RLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEE 431

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L +       F F ++    + N   Y+ YA  R   I R+ 
Sbjct: 432 FIQHVAGTVGLAAVKYADLSQNRITNYQFSFDRMLAL-QGNTAPYLLYALVRIAGIARKG 490

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                    DL   N   Q SE    E  L+  L ++  VI        P +L  Y ++L
Sbjct: 491 G--------DLAGTNAQLQFSE--PQEWALVRELLKFDAVIAEVEEELLPNRLCSYTFEL 540

Query: 529 ASVFH 533
           + VF+
Sbjct: 541 SQVFN 545


>gi|203284498|ref|YP_002222238.1| arginyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690568|sp|B5RME6|SYR_BORDL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|201083941|gb|ACH93532.1| arginyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 585

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 141/619 (22%), Positives = 258/619 (41%), Gaps = 90/619 (14%)

Query: 5   ADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           AD  ++++  +KE+     IK++K     IV+++P     G LS       S+ L L   
Sbjct: 7   ADLKNKIQKTIKELALSSNIKLDK---INIVMQKPPKSEMGDLSI-LIFEFSKILKLSIP 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121
            I + I+ +I  +    S+      ++N+  +   Y++  +  +      YG N   +  
Sbjct: 63  VITQEIIKQIGNEYKTKSM----GPYLNIKFNRKEYIQNTIKKVNKEKENYGANNSLQNK 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLAL 179
           K  IEF S N   P+HVGH R  ++G++L+ ++  SG +VT+   IND G  I  + LA 
Sbjct: 119 KTIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGSKVTKINLINDRGTHICKSMLAY 178

Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             F      + A    D  + + Y           E+A+    +LL   E+     V+ +
Sbjct: 179 KKFGNNITPEIAQKKGDHLIGDFYVKYNEYASQNSEIAENEIQQLLCQWEQGDEKTVQLW 238

Query: 237 SVQAMMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEG---- 289
           +      I  I++     NI  D I++  + F  G     R+++ N  ++G  Y+     
Sbjct: 239 TKLNKWAIDGIKETYNTTNITFDKIYLESEIFKIG-----REVVINGLKEGLCYKREDGA 293

Query: 290 -ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYER 347
             +  P    T+K ++D +   F+         + LL+++G+  Y   DL      K E 
Sbjct: 294 ICINIP----TEKNNIDNQN--FKQ--------KVLLRANGTSIYLTQDLGNIVARKNEF 339

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            FD MIYV+GS+   + K L  VA  +        + L   +    +G   KM  R G+ 
Sbjct: 340 DFDEMIYVVGSEQIHHFKTLFYVADKLGVTNENNLIHLSYGMVNLPEG---KMKSREGNI 396

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------------DFDFCKVKE 444
           I   +++ ++   ++  +    +N + L                       D  F K + 
Sbjct: 397 IDADNLIHDLSQSTMLELKKRYENEQNLQKLALNISLGAIHYYLLKTAIHKDILFNKTES 456

Query: 445 QS-KENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            S   N   Y+QY  AR  SI  +  ++     + +FDL            + +E ++I 
Sbjct: 457 LSFTGNSGPYIQYVGARINSILDKYNNLNLANKNTNFDLL----------VNENEWEIIK 506

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            ++E+   I  A+  + P  +A Y Y LA  F  ++         + +  +N +LT  R+
Sbjct: 507 IISEFEEYIIKASKDRNPSIIANYSYLLAKNFSTYYQD------TKIIDKDNLELTHARI 560

Query: 561 QLVHAVASIINSGLNIIGV 579
            L  AV   I + ++++ +
Sbjct: 561 DLAKAVLQTIKNCMHLLNI 579


>gi|258621159|ref|ZP_05716193.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586547|gb|EEW11262.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 597

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 127/612 (20%), Positives = 234/612 (38%), Gaps = 120/612 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 47  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G++V R  +I D G Q   L                    L  F+R  + 
Sbjct: 160 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKK 219

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   +++  +  + E  ++  D  P+  I+ +L  +G   E                D
Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303

Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S   
Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE    
Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 421

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  V   +V++  L +  +    FD+  +    + N   Y
Sbjct: 422 AKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 480

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   +++  
Sbjct: 481 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 531

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P+ +  YL++LA +F   +           + A    +   RL+L    A  I  G
Sbjct: 532 REGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESVKQSRLKLAALTAKTIKQG 585

Query: 574 LNIIGVESPNEM 585
           L ++G+E+   M
Sbjct: 586 LALLGIETLERM 597


>gi|161528194|ref|YP_001582020.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339495|gb|ABX12582.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 628

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 144/667 (21%), Positives = 267/667 (40%), Gaps = 133/667 (19%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIE------RPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            K+ L EI+  +    KILD + I        P     G +S+N + +L++ L   P  I
Sbjct: 3   FKSILDEIENNLN---KILDDLSISDVKFSVEPAKPGFGDVSSNVSFLLAKQLKKSPKEI 59

Query: 65  AELIVARIK--IDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121
           +E++  +    +   V        G++N Y   P   + ILS   +   E+G   IGK +
Sbjct: 60  SEMLSEKYSQCVSTLVSKSESHPSGYLNFYADWPKLNQLILSESNLP--EFGDVDIGKNS 117

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +E  S NP   +H+GH R  ++GDT++ ++  + Y+V    Y++D+G Q+  + +  
Sbjct: 118 TIVVEHTSVNPNKALHIGHIRNIIIGDTISRILQKANYKVNVLNYVDDSGLQVADIIVG- 176

Query: 182 FWRYQQALYNNDSDLPEG----YYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           F  +   +     + P+G    +Y G  VY+K   K   D  S E +     K L     
Sbjct: 177 FKHFGYPI-----EPPQGKKFDHYCGDDVYVKTTEKYEQDS-SLEEIRKNVLKELEDGTS 230

Query: 236 YSVQAMMKIIRDDL-KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            + Q   KI R  L   L    ++ +S D  +             + R G +++GI    
Sbjct: 231 ETAQFADKITRRVLSNQLETCWNLAVSYDCLN---------FESQIIRSG-LWDGIFEKL 280

Query: 295 KSKTTQKCDMDRKQ---LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK------- 344
           K     + + D K     + R    G + D+ +++S+G+ TY A D+ Y   K       
Sbjct: 281 KEMNLVEFENDGKNAGCWVIRGE--GKEEDKVIVRSNGTATYIAKDIPYAAWKLGLLDDP 338

Query: 345 --YER--------------------------GFDNMIYVMGSDHS----------GYVKR 366
             YE+                            D +I V+ S  +          G  K 
Sbjct: 339 FHYEKYEKEQPNSRVLWQTILNDGASESQNFSGDKVITVIDSRQARLQKIITSLMGKFKS 398

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----------- 415
           +      +  +   ++    +++ L  DG   +MS R G ++    V D           
Sbjct: 399 IPDAYVHLGYESVTLSSDTAKILGLETDGKQAQMSGRKGLYVNADSVYDLLKEKTTEETK 458

Query: 416 ----------------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAY 458
                            V   ++R+ M+ +   +++ FD  K +  +    P  Y+QY +
Sbjct: 459 KRHPEMDDSEIEKISHSVSVATLRYEMIKQDLDKIIAFDLTKSLSLEGDTAP--YIQYTH 516

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR   I  ++    P +D D    +++ ++SE D     L+  +  +   + +A     P
Sbjct: 517 ARASRILEKSGRT-PSIDVDF---SLLKEQSEID-----LVKMIGLFNLQVRDAANNLSP 567

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             ++ Y +DLA  F+  +       + + +   + KL   RL LV++    I   LN++G
Sbjct: 568 KVISRYCHDLAVTFNSFYE------KSKVLDLGDEKLENSRLCLVNSFKITIEKALNLLG 621

Query: 579 VESPNEM 585
           + +P++M
Sbjct: 622 ISAPDKM 628


>gi|224064484|ref|XP_002301499.1| predicted protein [Populus trichocarpa]
 gi|222843225|gb|EEE80772.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 138/592 (23%), Positives = 240/592 (40%), Gaps = 105/592 (17%)

Query: 43  GHLSTNAAM-----ILSRPLGLD---PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           G    N AM     I  RP G++   P  + + I+  +     ++S  +AG GF+N+ LS
Sbjct: 45  GDYQCNNAMGLWSKIKGRP-GIEFRGPPAVGQAIMKNLPQSEMIESCSVAGPGFVNVVLS 103

Query: 95  PSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            +++ K +  ++V GIE +   L  K  +  ++F S N    MHVGH R  ++GDTLAS+
Sbjct: 104 KNWMAKNIQKMLVDGIETWAPKLSIK--RAVVDFSSPNIAKEMHVGHLRSTIIGDTLASM 161

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGVYLKHVG 210
           + FS  EV R  ++ D G Q   L   +F ++      N++   DL   Y        V 
Sbjct: 162 LEFSNVEVLRRNHVGDWGTQFGMLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVD 221

Query: 211 KELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            E  D+    ++          + W  I          +I R +   +  +  + + E  
Sbjct: 222 AEFKDRAQKAVVRLQSGEQMYRKAWAQIC---------EISRREFDQVYQRLGVHLEEKG 272

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
               +P  I  +I+ L  QG V E       SK          +++F   + G ++   +
Sbjct: 273 ESFYNPY-IPGVIEALTNQGLVEE-------SKGA--------RVIF---IEGINIPLIV 313

Query: 325 LKSDGSYTYFAADLA--YFKCKYERGFDNMIYV---------------------MGSDHS 361
           +KSDG Y Y + D+   +++   E+  + +IYV                     + +D  
Sbjct: 314 VKSDGGYNYASTDMTALWYRLTEEKA-EWIIYVTDVGQQQHFDMFFKAAKRAGWLPADDR 372

Query: 362 GYVKRLE-AVAAAVSEKKAQINVLLCELVRL--------YRDGMPIKMSKRAGDFI--TL 410
            Y K         + E   +      E+VRL         R    +    +A ++    L
Sbjct: 373 QYPKASHVGFGLVLGEDGKRFRTRSTEVVRLADLLDEAKTRSKAALIERGKAAEWTEEEL 432

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               + VG  +V++  L  KN+ L +  FDF ++    K N   Y+ YA+AR  SI R++
Sbjct: 433 EQTAEAVGYGAVKYADL--KNNRLTNYTFDFDQML-NDKGNTAVYLLYAHARICSIIRKS 489

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                +L        ++   ++    E  L +HL ++  V+E A     P  L  YLY+L
Sbjct: 490 GKDTGELK---KTGKIVLDHAD----ERALGLHLLQFAEVVEEACTNLLPNVLCEYLYNL 542

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  +   +S+          Q         RL L  A A ++     ++G++
Sbjct: 543 SENYTRFYSN---------CQVVGSAEETSRLLLCEATAVVMRKCFFLLGIK 585


>gi|261405352|ref|YP_003241593.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281815|gb|ACX63786.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 620

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 150/347 (43%), Gaps = 47/347 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I IE+P    HG  +TN AM L++ L   PL IAELI A ++ D      V S  I   G
Sbjct: 31  IRIEQPASMEHGDYATNVAMQLAKVLRKAPLQIAELIQAELEQDASYKQLVRSTEIVAPG 90

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+NL +   Y       +  +  E          K+ IE  S NP    H+GH R + +G
Sbjct: 91  FMNLRIDWEYWASHQFELPPAANE----------KIVIEHTSINPNKSAHIGHLRNSCIG 140

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           DTL  LM   GYEV    YI+D G Q+    + +        +    D     Y      
Sbjct: 141 DTLVRLMRKLGYEVEVHNYIDDLGNQLADTVVGLLHTPLTKEHARFGDYCWDVYSSTNKA 200

Query: 208 HVGKELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           +  +    ++ +E+L+  EE      W+ ++     + ++K   +++K   I++D+ + E
Sbjct: 201 YEREPGLVQHRTEVLHALEEGNQNLSWIGLL---VAERIVKEHLEEMKQFGIEYDLLVWE 257

Query: 263 DDFHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCDMDRKQLLFRS-TMVGD 318
                           ++ R+G+    +E +   P      +  +    +L +S T  GD
Sbjct: 258 ---------------SSIVREGFWASAFELLKNTPLFHQETEGKLAGCWVLKQSGTEAGD 302

Query: 319 D------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +      +D+ L++S+G  TY A D+AY   KY    ++ +Y   +D
Sbjct: 303 EPESDHSIDKVLVRSNGILTYTAKDIAYHLWKYGVLSNDFVYKKFTD 349



 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 19/171 (11%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPD 474
           + + S+R+ +L       + FD  +  E S  N   Y+ Y+YAR  S+  +A++  + P 
Sbjct: 467 IATASIRYYLLRFALQTEVVFDLKQATEISG-NTGVYLLYSYARALSVLNKAREAEVTPS 525

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +    FP          + +E  L+ H++ +   + +A     P  +  + Y+L S+F+ 
Sbjct: 526 VPAR-FP--------AMEKAEHALLRHISTWYDTLYSAGRDLSPSAICNFTYELCSLFNN 576

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +S     P L+  +    ++   R+ L     + +   L ++G+ +P+ M
Sbjct: 577 FYS---ACPILKAAE----EMLQFRVWLTSLFKNTLGEALEVLGLPTPSRM 620


>gi|239946914|ref|ZP_04698667.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921190|gb|EER21214.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 126

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 13/132 (9%)

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAEYPRVIENAT 513
           R  SI  +A+++ P+  ++ F      + S++D S      E+++I  LA + + +E +T
Sbjct: 2   RTISILSKARELMPE-SYNSF------EASKYDLSLLSSEEEIEIIKLLAAWTKTLEAST 54

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP+++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ RL L  A+  +I SG
Sbjct: 55  KYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLARLALASAIQKVIASG 114

Query: 574 LNIIGVESPNEM 585
           L +IGVE  N+M
Sbjct: 115 LEVIGVEPMNKM 126


>gi|167376072|ref|XP_001733845.1| arginyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165904864|gb|EDR29997.1| arginyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 573

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 125/530 (23%), Positives = 227/530 (42%), Gaps = 99/530 (18%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118
           +P  +A  +  +IK +  +  V + G  F+N  ++ S L K IL+ +     ++G + +G
Sbjct: 56  NPNIVASQLAEQIKPNDIISRVTVTGP-FLNFAINKSALTKMILNQVAEEKEKFGGSTLG 114

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G  V +EF S N   P H GH R  ++G+ +A++    G+ V    ++ D G+Q   LA
Sbjct: 115 EGQNVIVEFSSPNIAKPFHAGHLRSTIIGNFIANIHKLLGFNVISMNWLGDWGSQFGLLA 174

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF------PEEKW 229
           +  F +Y  ++ L  N    P  +   VY+K +  K   D   ++  +F       +E +
Sbjct: 175 IG-FEKYGSEEELKRN----PIRHLYDVYVKINADKAKDDNVRAQGKDFFKHMEMGDEAY 229

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L   K +   A ++ ++   + LN+  DIF  E +    D   +  ++ +L  +G     
Sbjct: 230 LVKWKLFRSLA-LEDLKKTYERLNVSFDIFTGESE---TDWELVDQVLKDLEAKGI---- 281

Query: 290 ILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKY 345
                 SK  + C   D+++ +L              L K DGS  Y   D+A   K   
Sbjct: 282 ------SKMDKGCLIVDLEKYKLGI----------ALLKKDDGSTLYLTRDIASAIKRHN 325

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              F    YV+ +  + + K+L  +   +    A+     C  +     GM + MS R G
Sbjct: 326 TYSFSKCYYVVATQQTLHFKQLFKILELLGYSWAK----ECYHISF---GMVMGMSTRRG 378

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSE-----------------------LLDFDFCKV 442
             + L+ ++D+  +  +  M   +KN E                       + DF+  ++
Sbjct: 379 TAVFLQDILDDAKATMLENM---QKNPEKISEIDENERETVADKIGVSAVFIQDFNAKRI 435

Query: 443 K--EQSKENPVF-------YVQYAYARCRSIFRQAKDIFP---DLDFDLFPRNVIPQESE 490
           K  E ++E           Y+QYA+ARC  + R++    P   +++F L       +E+E
Sbjct: 436 KDYEYNRERMTSFEGYTGPYLQYAHARCCGVERKSGIEIPKASEVNFSLLTE----KEAE 491

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                  LI+++A++  VI N     EP  L  YL++L+ V    +S  R
Sbjct: 492 ------NLIMNIAKFGDVIMNTYRNLEPNTLVSYLFELSHVIASAFSTLR 535


>gi|308487658|ref|XP_003106024.1| CRE-RARS-1 protein [Caenorhabditis remanei]
 gi|308254598|gb|EFO98550.1| CRE-RARS-1 protein [Caenorhabditis remanei]
          Length = 711

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 138/595 (23%), Positives = 247/595 (41%), Gaps = 96/595 (16%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPS 96
           G     +AM ++  L ++     P  + + I A++  + D ++ + +   GFIN++L   
Sbjct: 161 GDYQCTSAMPIAAKLKINGINKKPADVGKEINAKLPKNIDFIEKIIVMPAGFINIFLKTD 220

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y+R  +S +   GI   +  + K  +V ++F S N    MHVGH R  ++GD++  L   
Sbjct: 221 YIRSQVSLLASKGISLPK--VAK-KRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFES 277

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G++V R  +I D G Q   L   ++ R+   L    + LP+      + K   K   + 
Sbjct: 278 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFL----NKLPDISDLQAFYKESKKRFDED 333

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S     F +  +  +VK  S         D +KA N   D+    +         + D 
Sbjct: 334 ES-----FKKRAYECVVKLQSHDG------DIVKAWNTICDVSKKYNQI-------VYDY 375

Query: 277 IDNLAR---QGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDG 329
           +D   +   + +  + ++   K     K DM    D +Q++F S   G DV   ++KSDG
Sbjct: 376 LDIKIKDVGESFYQDKMVDLVKWIKQNKPDMLREEDGRQIMFPS---GCDVPLTVVKSDG 432

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV-----------------KRLEAV- 370
            +TY  +DLA  K +  E   D  IYV+ +  S ++                 +R+E V 
Sbjct: 433 GFTYDTSDLAALKYRMLEEKVDWNIYVVDAGQSLHLETVYAAGRDFGWYDESKQRVEHVG 492

Query: 371 -AAAVSEKKAQINVLLCELVRLY--------RDGMPIKMSKRAGDFI--TLRHVVDEVGS 419
               + + K +      E VRL         R    +K  KR        L    D V  
Sbjct: 493 FGLVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLKEKKREAVMTEEELTTARDAVAF 552

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
             V++  L    ++   F F ++ +  + N   Y+ YAYAR RSI R +     D     
Sbjct: 553 GCVKYADLSHTRTQDYVFSFDRMLD-DRGNTAVYLLYAYARIRSIVRTSG--VNDTQLAE 609

Query: 480 FPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +  N  V+P     +    + ++ L++   ++ ++ +    +++  Y+Y LA++FH  ++
Sbjct: 610 YVSNTPVLPLNHPAELKLAKHLLKLSDCILLVLDSLML---HQVCDYVYQLATLFHDFYN 666

Query: 538 H-------GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   G E P + F           RL L    A++I++   I+G+    +M
Sbjct: 667 ECYVIEKKGDEPPVVHF----------HRLALCEVTANVISTCFKILGIREVPKM 711


>gi|297625461|ref|YP_003687224.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921226|emb|CBL55776.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 544

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 232/573 (40%), Gaps = 89/573 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++  G  P  +A+ IV ++ +    + V IAG GF+N  L       +L
Sbjct: 31  GHFQSNVALRLAKQQGKPPRQVAQEIVDKLDVGDLCEPVEIAGPGFLNFRLRAD----VL 86

Query: 103 SSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  V   +   R  I        V I++ + N    MHVGH R  ++GD    ++   G+
Sbjct: 87  AGAVTDQLHDPRAGITPTELPQTVVIDYSAPNAAKQMHVGHLRSTIIGDCFNRVLRAKGH 146

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
            V  + +I D G Q   L        +QAL +   DL      G       +EL  + ++
Sbjct: 147 TVIAQNHIGDWGRQFGML-------IEQAL-DEKLDLDSLDLAGA------EELYKRANA 192

Query: 220 ELLN---FPEEKWLPIVK----DYSVQAMMKIIRDDLKA----LNIQHDIFISEDDFHRG 268
            L +   F +     +VK    D   +AM + + D  KA       +  + +++ D+  G
Sbjct: 193 HLKSDDAFADRARERVVKLQNGDADTRAMWRKMIDLSKAGFNKTYARMGVLLTDADY-AG 251

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +                +Y  +LP       Q+      Q      + G D    L  S 
Sbjct: 252 ES---------------MYNEMLPQVCDDLEQRGIAKLDQGALVVFVKGFDAPAILRNSQ 296

Query: 329 GSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVA-------AAVSEKKAQ 380
           G Y Y   D+A  + + +    N +IYV+GS+ + +   + AV        A VS +   
Sbjct: 297 GGYGYDVTDVAAVRYRVDDLEANRLIYVVGSEQTYHFNLIFAVCREAGYLPAWVSAQHVG 356

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR------KNSEL 434
             ++L        DG   K S R G  + L  ++DE    +   + L         NS  
Sbjct: 357 YGMVLGP------DGK--KFSTREGTAVHLNDLLDEAEEHAAPEIALAAIKYADLSNSLQ 408

Query: 435 LDFDFCKVK-EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            D+ F  V+  Q+  +   Y+QYA+AR   I R+A       D +    + I    E   
Sbjct: 409 KDYVFDPVRMTQTTGDTGPYLQYAHARVSQILRKA-------DAEGLSGDTISVLDEVPE 461

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN-PRLRFVQANN 552
            EL L   L  +   ++       P+KL  YLY+LA+ +   +    EN P L+    ++
Sbjct: 462 QELAL--WLTRFGDAVDEVADELTPHKLCTYLYELATKYSTFY----ENCPVLK----SD 511

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL L      ++ +GL+++G+ +P  M
Sbjct: 512 GDVRTSRLALCATTKRVLATGLDLLGIAAPERM 544


>gi|119773583|ref|YP_926323.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166232838|sp|A1S2P7|SYR_SHEAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119766083|gb|ABL98653.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 581

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 2/169 (1%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S L+  L+ +  +  V      RI ++R +D +HG L+TN AM+L++  G  P  +A+LI
Sbjct: 7   SLLEQTLESLKAQGIVPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKPPREMAQLI 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           +  +     V  V IAG GFIN ++  + L   L + +   +  G       T V +++ 
Sbjct: 67  IDNLPASAQVAKVEIAGPGFINFFIDDNALANQLKAALGDAM-LGVKAAAPQTVV-VDYS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L
Sbjct: 125 SPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGML 173



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D   ++ +   VG  SV++  L +  S    F F ++    + N   Y+ YAY R   IF
Sbjct: 419 DETEVKEIARVVGIASVKYADLSKNRSSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++A++I      DL    ++    +    E +L   LA++  ++       +P+ L  YL
Sbjct: 478 KKAENI------DLTNAELVLDHDK----EKELGNKLAQFGEILARMVDKGQPHILCGYL 527

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA  F   +      P L    A++      RL L    A  +  GL+++G+E+   M
Sbjct: 528 YELAGAFSSFY---EACPVL---SADSETARDSRLLLSRLTADTLKQGLSLLGIETLERM 581


>gi|149280422|ref|ZP_01886542.1| arginyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149228836|gb|EDM34235.1| arginyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 591

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 235/577 (40%), Gaps = 128/577 (22%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           + F   KGF+NL +   Y   + ++ ++S   YG      G KV +E+ S N   P+H+G
Sbjct: 72  TAFNVVKGFLNLSIDHEYWLNLFNTKLLSP-HYG-TFPSNGRKVMVEYSSPNTNKPLHLG 129

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----- 194
           H R  ++G ++A L+  SG EV +   +ND G  I    L+  W   Q   N ++     
Sbjct: 130 HVRNNLLGYSVAELLKASGSEVFKVNLVNDRGIHICKSMLA--W---QNWGNGETPASSG 184

Query: 195 ---DLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              D   G Y  ++ K   KE+    AD  + E      +K  P++K  + QAM+     
Sbjct: 185 LKGDHLVGKYYVIFDKEYKKEIDALKADGQTEE----EAKKNAPLIK--AAQAMLLA--- 235

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR- 306
                            +  GD + I D+   +   G+VY+G     K+      D D+ 
Sbjct: 236 -----------------WETGDTAVI-DLWKMM--NGWVYDGFEVTYKN---LGVDFDKY 272

Query: 307 -------------------KQLLFRS-------TMVGDDVDRPL-LKSDGSYTYFAADLA 339
                              K + F+         +  D +D+ L L++DG+  Y   DL 
Sbjct: 273 YYESNTYLLGKDSVEEGLAKGVFFKKPDGSVWIDLTEDGLDQKLVLRADGTSVYITQDLG 332

Query: 340 YFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             + KY+    D  IYV+G++   + K L  +   + +  A+    L  L     D    
Sbjct: 333 TAQMKYDDFNMDESIYVVGNEQDYHFKVLFLILDKLGKSWAKG---LYHLSYGMVDLPSG 389

Query: 399 KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWR 429
           KM  R G  +    ++ E                             +G  ++++ +L  
Sbjct: 390 KMKSREGTVVDADDLIAEMVATAKEKTEALGKVDHFSEEEKSTLYYNIGMGALKYFLLKV 449

Query: 430 KNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +  + L FD  + +  Q    P  ++QY +AR +S+  +A        FD   R+    E
Sbjct: 450 EPKKRLLFDPSESIDFQGNTGP--FIQYTHARIKSLLTKAGHTVGIQGFD---RHFALTE 504

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +E D     +I+ L ++P  I  A  A  P  LA Y+Y++A +F+  +    E P +  +
Sbjct: 505 TELD-----MIILLDKFPAEITAAAAAFSPATLANYVYEVAKLFNKFY---HEVPPI--I 554

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  + +L   RL L    A +I SG+ I+G+E P  M
Sbjct: 555 KEEDAQLQHYRLNLSWVTAHVIKSGMRILGIEVPERM 591


>gi|160891544|ref|ZP_02072547.1| hypothetical protein BACUNI_03996 [Bacteroides uniformis ATCC 8492]
 gi|156858951|gb|EDO52382.1| hypothetical protein BACUNI_03996 [Bacteroides uniformis ATCC 8492]
          Length = 605

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 141/630 (22%), Positives = 261/630 (41%), Gaps = 126/630 (20%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   ++ +    + F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVAAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I     +YG       +  V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHADK-QYGIVAATDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++A +G +V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 145 LANIVAANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------- 247
            Y   + KH     KEL  K+ SE +N  E K     K  +   +MK  R+         
Sbjct: 198 DYYVSFDKHYKAEVKELMAKFQSEGMNEEEAK----AKAETESPLMKEAREMLVKWEAND 253

Query: 248 -DLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303
            +++AL   +   ++   D+ +R     +    D +  +   Y EG     K K  +  +
Sbjct: 254 PEVRALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESNTYLEG-----KEKVMEGLE 304

Query: 304 MDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
              K   +R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D MIY
Sbjct: 305 ---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIY 361

Query: 355 VMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           V+G++ +                          G V+  E    +        + L+ E+
Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEM 421

Query: 389 VRLYRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELL 435
           +   ++     G    ++K   D     ++   VG  ++++ +L    RKN      E +
Sbjct: 422 IDTAKETSNELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESI 476

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           DF+          N   ++QY YAR +S+ R+AK+   ++   L      P   E    E
Sbjct: 477 DFN---------GNTGPFIQYTYARIQSVLRKAKEAGIEIPAQL------PAGIELSEKE 521

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             LI  +A++  +++ A     P  +A Y YDL   ++  +           ++  N  +
Sbjct: 522 EGLIQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAV 575

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 576 KVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|163815005|ref|ZP_02206392.1| hypothetical protein COPEUT_01159 [Coprococcus eutactus ATCC 27759]
 gi|158449688|gb|EDP26683.1| hypothetical protein COPEUT_01159 [Coprococcus eutactus ATCC 27759]
          Length = 563

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 123/566 (21%), Positives = 238/566 (42%), Gaps = 78/566 (13%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ +   P  IA  I  +I     ++ + +AG  ++N Y+      K +     + + +
Sbjct: 43  LAKIMRKAPNMIAADIKEQIGDVDFIEKIDVAG-AYLNFYIKKDIFVKTMIE-AANSVNF 100

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           G + +G G  + I++ S N     HVGH R  ++G++L  + +  GY+V R  ++ D G 
Sbjct: 101 GCSDLGDGQTICIDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYKVVRINHLGDWGT 160

Query: 173 QINTLALSV-FWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADK---YSSELLNFPEE 227
           Q   L ++   W  ++A+  +  ++L + Y           EL D+   + +++ N  EE
Sbjct: 161 QFGKLIVAYKAWGTKEAVEKDGIAELMKLYVKFHEEADKNPELVDEARAWFNKMENGDEE 220

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             L I + +   ++++  R     L +  D ++ E  F+R      + ++D +   G + 
Sbjct: 221 A-LSIWQWFKDISLVEYKRT-YNLLGMDFDYYLGES-FYR---DKCQAVVDKVKAAGLLK 274

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYE 346
           E       +      D D    +             + K DGS  Y   DLA  F  K  
Sbjct: 275 ES----EGAMIVDLSDYDMAPCI-------------ITKKDGSSIYATRDLAAIFYRKDT 317

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             F   +YV G +   +  ++  V   +  + A+  ++      +  +G   K+S R+G+
Sbjct: 318 YNFSKCLYVTGQEQKLHFAQVFKVVELLGNEWAKDQLVHIPYGLVSLEGA--KLSTRSGN 375

Query: 407 FI-------------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            I                             V  +VG  +V F  L+ +  + + F + K
Sbjct: 376 IIYAEDILKDAIAKSLEIITEKSPNLPNKEDVAKKVGVGAVLFNDLYNQRIKDVSFSWNK 435

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           V     E    YVQY +ARC S+ R  +  D    +++DL    +  Q++      ++L+
Sbjct: 436 VLNFDGETGP-YVQYTHARCCSVVRMDENFDSSAPVNYDL----ITEQDA------IELL 484

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             +  +P VI++A    EP  +A +  D+A  F+  ++  R       +  ++R L   R
Sbjct: 485 KEINRFPAVIKDAADKYEPSIVARFAVDVAQAFNKFYNSTR-------INVDDRDLKNAR 537

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L +   + I   LN++G+E+P  M
Sbjct: 538 VMLTYLTKNTIAEALNLLGIEAPEAM 563


>gi|288929012|ref|ZP_06422858.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329996|gb|EFC68581.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 605

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 123/564 (21%), Positives = 236/564 (41%), Gaps = 103/564 (18%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P+    +L+ I  S   +G   + + +  V +E+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTIAPAAWISLLNRID-SEPRFGEKAVNEQSPLVMVEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----- 199
           ++G +LA +M  +G  V +   +ND G  I    L+  W+        +S   +G     
Sbjct: 140 LLGWSLAQIMEANGNRVVKTNIVNDRGIHICKSMLA--WKKWGNGATPESTGKKGDHLIG 197

Query: 200 -YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            YY   + +H   ELA+  +               +  + +   K  ++D   +   HD+
Sbjct: 198 DYYVA-FDQHYRAELAELTAKFR-----------AEGMAAEEAEKRAKEDSPLMKEAHDM 245

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEG--------------ILPPPKSKTTQKCDM 304
            +    + +GD   +R +   +    +VY+G              I    ++    K  +
Sbjct: 246 LVR---WEQGDEE-VRALWKKM--NDWVYQGFDETYKAMGVGFDKIYYESETYLEGKAKV 299

Query: 305 DR---KQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNM 352
           +    K+L FR       + +  + +D+ LL ++DG+  Y   D+     ++ +   D M
Sbjct: 300 EEGLAKELFFRKPDGSVWADLSDEGLDQKLLLRADGTSVYMTQDIGTAALRFKDYPIDKM 359

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFIT 409
           IYV+G++ + + + L  +   +  K  +      ELV      + +   KM  R G  + 
Sbjct: 360 IYVVGNEQNYHFQVLSILLDRLGFKWGK------ELVHFSYGMVELPNGKMKSREGTVVD 413

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLD--------------FDFCKVKEQSKENPVF--- 452
              +++E+ S + R      K +++ +                +  +K  +++N +F   
Sbjct: 414 ADELMEEMVSAARRTSEELGKFADMTENERNEIARIVGMGALKYFILKVDARKNMLFNPE 473

Query: 453 -----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                      ++QY YAR RSI R+A     + +  + P +V+P     +  E+QLI  
Sbjct: 474 ESIDFNGNTGPFIQYTYARIRSIMRKA-----EAEGIVLP-SVLPDTLPLNEKEVQLIQK 527

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L  +  V+E A     P  +A Y Y+L   F+  +           + A + +   +RL 
Sbjct: 528 LNSFETVVEQAGKDYSPSGIANYCYELTKDFNQFYHD------YSILNAESAEAKTLRLA 581

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L   VA  I +G+ ++G+E P  M
Sbjct: 582 LAKNVAKTIKNGMQLLGIEVPERM 605


>gi|225181879|ref|ZP_03735314.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167393|gb|EEG76209.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 564

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 244/577 (42%), Gaps = 101/577 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE- 111
           L++ L   P  IA  +  ++      D V   G  +IN +      RK+L+ + +  ++ 
Sbjct: 45  LAKELRNAPPKIAAELAEKLPASELFDRVEARGP-YINFFCD----RKMLAQLTLDEVQT 99

Query: 112 ----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               +G+   G G  V I+F + N   P  VGH R  V+G++L  +    GY+     ++
Sbjct: 100 EREKFGQRKSGSGQTVVIDFSAPNIAKPFGVGHLRSTVIGNSLYRIHEALGYKSVGINHL 159

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-- 225
            D G Q   L ++         + +D+ L E   P  YL     EL  ++  E    P  
Sbjct: 160 GDWGTQFGKLIVAYL------KWGDDTRLEED--PITYLY----ELYVRFHREAEEKPAL 207

Query: 226 -EEK--WLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
            EE   W   ++D   QA  + +  RD  L      ++I     D ++G+ S   +++D+
Sbjct: 208 DEEARAWFKKLEDGDEQARQLWQRFRDLSLAEFKRIYNILGVHFDSYQGE-SYYNEMLDD 266

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336
             R+             +T    ++    L+       +D + P   L K DG+  Y   
Sbjct: 267 TVRE------------VETKGLTEVSEGALIVNL----EDSNMPPCLLRKQDGATLYATR 310

Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394
           DL     +++   F  M+YV+G+D + + +++ AV   +  + A+    +   L+R +++
Sbjct: 311 DLCAAIYRHQMHDFSKMLYVVGADQALHFQQVFAVLKKLGYEWAENCTHVPFGLIR-FKE 369

Query: 395 GMPIKMSKRAGDFITLRHVVD-------------------------EVGSDSVRFMMLWR 429
           G   KMS R G  I L  V++                         +VG  +V F  L  
Sbjct: 370 G---KMSTRQGTLIFLEDVLNRATELAHQIIQEKNPQLENKYEVAKKVGIGAVIFGDLSN 426

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + ++FD+ KV + S E    Y+QY++AR  SI R+A       D  L          
Sbjct: 427 DRVKNIEFDWDKVLDFSGETAP-YIQYSHARICSILRKAAAWPAPFDATLLV-------- 477

Query: 490 EFDTSELQLIV-HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              + E QL++  +A +   I  A    +P  LA YL DLA+ F+  +    + P L   
Sbjct: 478 ---SDEEQLVLGTIARFSDAIARAADTLKPSVLARYLLDLAAAFNRFY---HQCPVLN-- 529

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   RL L+ AV  ++ +GL ++G+E+P EM
Sbjct: 530 --AEDDIRNARLALIDAVRQVLVNGLYLLGIEAPEEM 564


>gi|203288032|ref|YP_002223047.1| arginyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690575|sp|B5RPU2|SYR_BORRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|201085252|gb|ACH94826.1| arginyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 585

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 142/623 (22%), Positives = 257/623 (41%), Gaps = 98/623 (15%)

Query: 5   ADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           AD  ++++  +KE+     IK++K     IV+++P     G LS       S+ L L   
Sbjct: 7   ADLENKIQKTIKELALSSNIKLDKI---NIVMQKPPKSEMGDLSI-LIFEFSKILKLSIP 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121
            I + I+ +I  +    S+      ++N+  +   Y++  +  +      YG N   +  
Sbjct: 63  VITQEIIKQIGNEYKTKSM----GPYLNIKFNRKEYIQNTIKKVNKEKENYGANNSLQNK 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLAL 179
           K  IEF S N   P+HVGH R  ++G++L+ ++  SG +VT+   IND G  I  + LA 
Sbjct: 119 KTIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGSKVTKINLINDRGTHICKSMLAY 178

Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             F      + A    D  + + Y           E+A+    +LL   E+       + 
Sbjct: 179 KKFGNNITPEIAQKKGDHLIGDFYVKYNEYASQNSEIAENEIQQLLYQWEQG-----DEK 233

Query: 237 SVQAMMKI-------IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +VQ   K+       I++     NI  D I++  + F  G     R+++ N  ++G  Y+
Sbjct: 234 TVQLWTKLNKWAIDGIKETYNTTNITFDKIYLESEIFKIG-----REVVINGLKEGLCYK 288

Query: 289 ----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC- 343
                I     ++T    + + KQ             + LL+++G+  Y   DL      
Sbjct: 289 REDGAICINIPTETNNIDNQNFKQ-------------KVLLRANGTSIYLTQDLGNIVAR 335

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           K E  FD MIYV+GS+   + K L  VA  +        + L   +    +G   KM  R
Sbjct: 336 KNEFDFDEMIYVVGSEQIHHFKTLFYVADKLGITNENNLIHLSYGMVNLPEG---KMKSR 392

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------------DFDFC 440
            G+ I   +++ ++   ++  +    +N + L                       D  F 
Sbjct: 393 EGNIIDADNLIHDLSQSTMLELKKRYENEQNLQKLALNISLGAIHYYLLKTAIHKDILFN 452

Query: 441 KVKEQS-KENPVFYVQYAYARCRSIFRQAKDI-FP--DLDFDLFPRNVIPQESEFDTSEL 496
           K +  S   N   Y+QY  AR  SI  +  ++  P  + +FDL            + +E 
Sbjct: 453 KTESLSFTGNSGPYIQYVGARINSILDKYNNLNLPNKNTNFDLL----------INENEW 502

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           ++I  ++E+   I  A+  + P  +A Y Y LA  F  ++         + +  +N +LT
Sbjct: 503 EIIKIISEFEEYIIKASKDRNPSIIANYSYLLAKNFSTYYQD------TKIIDKDNLELT 556

Query: 557 MMRLQLVHAVASIINSGLNIIGV 579
             R+ L  AV   I + ++++ +
Sbjct: 557 HARIDLAKAVLQTIKNCMHLLNI 579


>gi|325955141|ref|YP_004238801.1| Arginyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437759|gb|ADX68223.1| Arginyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 590

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 138/588 (23%), Positives = 239/588 (40%), Gaps = 125/588 (21%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK- 122
           I E ++A+ KI     + +   KGF+N+ L PS +   LS      + YG     + +K 
Sbjct: 62  IGEHLLAQKKI-----ASYNVVKGFLNIELLPSTIVSYLSE-NAQNVSYGLQFPTEKSKT 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALS 180
           V +E+ S N   P+H+GH R  ++G ++A ++A SG  + +   IND G  I  + LA  
Sbjct: 116 VMVEYSSPNTNKPLHLGHVRNNLLGYSVAEIIAASGANIVKTQIINDRGIHICKSMLAWE 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F          + + PE        K  G  L  KY  E     ++ +   +K+     
Sbjct: 176 KF---------GNGETPESS------KIKGDHLVGKYYVEF----DKHYRDEIKELVANG 216

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           M      + +    +  IFI   +  R     DP  +R + + +    +VY+G      +
Sbjct: 217 M------EEEEAKKKAPIFIEAQEMLRKWEANDPE-VRALWEKM--NNWVYDGF-----A 262

Query: 297 KTTQKCDMDRKQLLFRST--MVGDDV----------------------------DRPLLK 326
           KT Q+  +D  + L+ S   ++G D+                            ++ +L+
Sbjct: 263 KTYQRLGVDFDEYLYESDTYILGKDLVEEGLRNGVFYRKQDGSVWIDLTEDGLDEKLVLR 322

Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +DG+  Y   DL     +++ R  D++IYV+G++   + K L  +   +    A+    L
Sbjct: 323 ADGTSVYITQDLGTAVERFKHRELDDLIYVVGNEQDYHFKVLFLILQKLGYSWAET---L 379

Query: 386 CELVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDEVG-----SDSVRFMMLWR 429
             L     D    KM  R G  +           T + +  E+G     +D+ +  +   
Sbjct: 380 QHLSYGMVDLPEGKMKSREGTVVDADDLMQEIYETAKEIAQELGKLEGYTDAEKESLYEI 439

Query: 430 KNSELLDFDFCKVKEQS------KENPVF------YVQYAYARCRSIFRQAKDIFPDLDF 477
                L +   KV  +       KE+  F      +VQYAYAR +S+ R  K+   D+D+
Sbjct: 440 IAMGALKYFILKVDPKKRILFDPKESVDFNGNTGPFVQYAYARIQSLLR--KESPKDMDW 497

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                  I +E         LI  L+++   I+ A     P  +A Y YDL  +++  + 
Sbjct: 498 STIKLQGIEKE---------LIRLLSDFGETIQKAAEELSPAIIANYTYDLVKLYNSFYQ 548

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    P L+     N      RL L   V + I SGL ++G++ P  M
Sbjct: 549 N---TPILK---TENETEKHFRLMLSLWVGNTIASGLKLLGIQVPERM 590


>gi|262170936|ref|ZP_06038614.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892012|gb|EEY37998.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 577

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 127/612 (20%), Positives = 233/612 (38%), Gaps = 120/612 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 27  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 87  LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G+ V R  +I D G Q   L                    L  F+R  + 
Sbjct: 140 DAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKK 199

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 200 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 245

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   +++  +  + E  ++  D  P+  I+ +L  +G   E                D
Sbjct: 246 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 283

Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S   
Sbjct: 284 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 343

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE    
Sbjct: 344 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 401

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  V   +V++  L +  +    FD+  +    + N   Y
Sbjct: 402 AKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 460

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   +++  
Sbjct: 461 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 511

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P+ +  YL++LA +F   +           + A    +   RL+L    A  I  G
Sbjct: 512 REGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESVKQSRLKLAALTAKTIKQG 565

Query: 574 LNIIGVESPNEM 585
           L ++G+E+   M
Sbjct: 566 LALLGIETLERM 577


>gi|325662130|ref|ZP_08150748.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085927|ref|ZP_08335010.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325471579|gb|EGC74799.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330406850|gb|EGG86355.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 588

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 131/601 (21%), Positives = 240/601 (39%), Gaps = 96/601 (15%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA  +V +++    +        GFINL L  
Sbjct: 33  RPDLCEY---QCNGAMAGAKTYRKAPIMIANDVVEKLQESTCIQEAEAVAPGFINLKLDR 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            +L   L+ +       G     +   + +++  AN   P+HVGH R A++G+++  +  
Sbjct: 90  EFLAGYLNQMSEDA-HLGFETAKEPKTIIVDYGGANVAKPLHVGHLRSAIIGESIKRIGK 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---- 211
           F+G+ V  + ++ D G Q+  +   +  R  +  Y +++    G YP      +G+    
Sbjct: 149 FAGHHVIGDVHLGDWGYQMGLVITELKKRKPELPYFDEN--FAGEYPEEAPFTIGELEEI 206

Query: 212 -ELADKYSSELLNFPEEKWLPIV------KDYSV--QAMMKIIRDDLKA----LNIQHDI 258
              A  Y+ E  ++ EE            + Y    + +M +   DLK     LN+  D+
Sbjct: 207 YPTASAYAKEHEDYKEEALQATFLLQNGHRGYRAVWKHIMNVSVADLKKNYGNLNVDFDL 266

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D     P    D+++ + ++GY +                +D   L+       D
Sbjct: 267 WKGEADAQEYIP----DMVEYMKKEGYAH----------------IDNGALVVDVKEETD 306

Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD---HSGYVKRLEAV 370
             + P   +LKSDG+  Y   DLA    + E+ +  D +IYV+      H   V R    
Sbjct: 307 TKEIPPCMILKSDGAALYDTTDLATL-IEREKLYQPDEVIYVVDKRQELHFVQVFRCARK 365

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              V+EK     V    +    +DG P K   R G  + L +++ E+  +  + +   R 
Sbjct: 366 TKIVNEKTDLQFVGFGTMNG--KDGKPFKT--RDGGVMRLENLIREINEEMYKKITDNRT 421

Query: 431 NSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIF 465
            SE           L    +  +  Q+ ++ VF              Y+ Y   R +SI 
Sbjct: 422 VSEEEARKTAQIVGLSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSIL 481

Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R A+      D  L         S    SE  L++  A++  VIEN      P+K+  Y
Sbjct: 482 ARYAEMEGSKTDVKLL--------SACSDSEKALMLEAAKFNSVIENTLEELAPHKICAY 533

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +YDLA+ F+  +         + +   +++     + L+     ++ + ++++G E+P  
Sbjct: 534 IYDLANTFNRFYH------ETKILAEEDKERQASFIALLTVTKKVLETCIDLLGFEAPER 587

Query: 585 M 585
           M
Sbjct: 588 M 588


>gi|322697634|gb|EFY89412.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 633

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 119/516 (23%), Positives = 214/516 (41%), Gaps = 83/516 (16%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +G+   +NL     ++ +EF S N   P H GH R  ++G  +A+L   +G++V R  Y+
Sbjct: 145 NGLRDPKNLSSGKKRIIVEFSSPNVAKPFHAGHLRSTIIGSFIANLYEANGWDVVRMNYL 204

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL----------------KHVGK 211
            D G Q   LALS      +   N +   P  +   +Y+                K  GK
Sbjct: 205 GDWGKQYGLLALSYERNGNEEELNKN---PIDHLFKLYVQINAEMSAEKEAIEEQKKEGK 261

Query: 212 ELADKYSSELLNFPEEKWLPIV-KDYSVQAMMKIIRD--------DLKALNIQHDIFISE 262
           +++   ++ L     + +  +  +D +V +  +  RD            LNIQ D F  E
Sbjct: 262 DVSALEANSLDEQARQYFRRMTDRDEAVLSQWQQFRDLSIARYKETYSRLNIQFDEFSGE 321

Query: 263 DDFHRGDPSPIRDIID--NLARQ--GYV---YEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
                   S I D +   N++R+  G V   +  +LP  + K                  
Sbjct: 322 SQVSEESMSKIADEMKEKNISREDKGAVLVDFTQLLPGKEGKR----------------- 364

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA- 373
           +G  V   L K DG+  Y   D+     ++E+  FD+MIYV+ S    ++K+L  +    
Sbjct: 365 LGTTV---LRKRDGTALYLTRDVCELLGRHEKYNFDHMIYVVASQQDLHLKQLFQIIELL 421

Query: 374 ----VSEKKAQIN--VLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRF 424
               +++K   IN  ++L ++++   D M   M K    +  +       D +G  SV  
Sbjct: 422 GYKDIAKKCQHINFGLVLDDILKDCADHMHETMKKNEEKYAQVEDPDATADTLGISSVMV 481

Query: 425 MMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
             +  K      F+   +   +    P  Y+QYA+AR  SI R+A     D D D    +
Sbjct: 482 QDMSGKRINNYTFNMEAMTSFEGDTGP--YLQYAHARLCSIKRRAN--LTDEDLDSANLS 537

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++ ++   +     ++  L+++P V++N     EP  +  YL+ +  V    + H +   
Sbjct: 538 LLKEDHAVN-----IVRMLSQWPDVLQNTLKTLEPTTVLTYLFKMTHVISSSYDHLQ--- 589

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
               V  + R+L   R+ L  A    + +G+ I+G+
Sbjct: 590 ----VVGSERELMKARMALYDAARITLANGMRILGL 621


>gi|262404425|ref|ZP_06080980.1| arginyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349457|gb|EEY98595.1| arginyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 597

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 129/613 (21%), Positives = 232/613 (37%), Gaps = 122/613 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 47  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188
           D +   + F G+ V R  +I D G Q   L                    L  F+R  + 
Sbjct: 160 DAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKK 219

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245
           LY+ D                  E A  Y  +L     F  E W  +V    +Q      
Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   +++  +  + E  ++  D  P+  I+ +L  +G   E                D
Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303

Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S   
Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE  ++
Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDE--AE 419

Query: 421 SVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVF 452
                ++  KN EL           +     K  + SK                  N   
Sbjct: 420 ERAKALIESKNPELSTEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAP 479

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAY R  S+F +A      +D      ++   E +    E  LI  L ++   +++ 
Sbjct: 480 YMQYAYTRVASVFAKA-----GVDMTQLTGHIQITEEK----EKALIAKLLQFEEAVQSV 530

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P+ +  YL++LA +F   +           + A    +   RL+L    A  I  
Sbjct: 531 AREGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESVKQSRLKLAALTAKTIKQ 584

Query: 573 GLNIIGVESPNEM 585
           GL ++G+E+   M
Sbjct: 585 GLALLGIETLERM 597


>gi|153826066|ref|ZP_01978733.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740183|gb|EDM54336.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 599

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 135/615 (21%), Positives = 231/615 (37%), Gaps = 126/615 (20%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + +D       IAG GFIN++
Sbjct: 49  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS  +L     + +      G       T V  ++ + N    MHVGH R  ++GD +  
Sbjct: 109 LSEEFLAAQAEAALAD-TRLGVAQEAPKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVR 166

Query: 153 LMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNND 193
            + F G++V R  +I D G Q   L                    L  F+R  + LY+ D
Sbjct: 167 TLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDED 226

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                             E A  Y  +L     F  E W  +V    +Q           
Sbjct: 227 EQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ----------- 261

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRK 307
                     ++ ++ R + S  R+ +   +    +Y  +LP   S    K    + D  
Sbjct: 262 ----------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGA 307

Query: 308 QLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
           Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + S    +
Sbjct: 308 QVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQH 367

Query: 364 VKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           + +    A  +  K   I  NV L      + L +DG P K   RAG  + L  ++DE  
Sbjct: 368 LMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAQ 421

Query: 419 SDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NP 450
             +    ++  KN EL           +     K  + SK                  N 
Sbjct: 422 ERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNT 479

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R  S+F +A      +D +    ++   E +    E  LI  L ++   ++
Sbjct: 480 APYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQ 530

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +     +P+ +  YL++LA +F   +           + A    +   RL+L    A  I
Sbjct: 531 SVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAKTI 584

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+++   M
Sbjct: 585 KQGLALLGIDTLERM 599


>gi|187933796|ref|YP_001886751.1| arginyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721949|gb|ACD23170.1| arginine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 563

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 125/539 (23%), Positives = 225/539 (41%), Gaps = 93/539 (17%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    +    ++ I+  G  YG + IG G  + +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKGVFAENTINKILKDGDNYGESNIGDGKTICVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G++L  +    GY+V    ++ D G Q   L +S +  W  ++AL       P      +
Sbjct: 137 GNSLYKMFKKEGYDVVGLNHLGDWGTQFGKL-ISAYNRWVDEEAL----EKAPIDELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD-DLKALNIQHDIF 259
           Y+K    + A+K  S      +E  +   K    D   QA+ K  RD  LK     +DI 
Sbjct: 192 YVKF--HDEAEKDPS----LEDEGRMYFKKLETGDPEAQALWKRFRDLSLKEFERVYDIL 245

Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + D   G+      +  +++ L  +G + E       S   Q              ++
Sbjct: 246 GVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SNGAQ-------------VVM 285

Query: 317 GDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            DD + P   +LK DG+  Y   DLA   Y K  Y+  F   IYV+GS  + + K++  V
Sbjct: 286 LDDYNMPPCIVLKGDGASIYATRDLAAAMYRKKTYD--FYKSIYVVGSPQALHFKQVFKV 343

Query: 371 AA-----------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                                     +S +K ++ VLL +L+R   +     ++++  + 
Sbjct: 344 LELAGHEWANDCVHVGFGLVKFADRKLSTRKGEV-VLLDDLIRESVEKTLEVINEKNPNL 402

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466
                V  ++G  ++ F  L     + + FD+ ++   + +  P  YVQY+YAR  SI  
Sbjct: 403 ENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYSYARANSIIS 460

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A++I   +D+                 E +L+  LA +   I+ AT   EP  L  Y+ 
Sbjct: 461 RAENISSKVDYSKLSS----------KEEFELVKVLANFNNQIKLATDKLEPSILTRYVI 510

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++A  F+  ++          +  ++  L   RL LV +   +I +GL ++G++   +M
Sbjct: 511 EVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563


>gi|172058863|ref|YP_001815323.1| arginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229558758|sp|B1YFI1|SYR_EXIS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171991384|gb|ACB62306.1| arginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 560

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 134/601 (22%), Positives = 246/601 (40%), Gaps = 115/601 (19%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+   HG L+      L++     P+ IA  +  +I  +P   +V  AG  ++N++
Sbjct: 27  LIEQPKHEDHGDLAF-PCFQLAKAFRKAPMMIATELAEKID-NPLFSNVQAAGP-YVNVF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+   + R+I+  ++     YG + +  G  +  +F S N   P  +GH R  V+G+ L 
Sbjct: 84  LNREVVSREIIKRVLEEQQAYGSSEL-NGKTIVTDFSSPNIAKPFSMGHLRSTVIGNALN 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQALYN 191
            +    GYEV    ++ D G Q   L                     L ++ R+ +    
Sbjct: 143 QISRKKGYEVVGINHLGDWGTQFGKLMVAYNMWGKEEDVRSEPIKELLKLYVRFHEEAEE 202

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N     EG     + K +  E  D+ ++ L  +  E  + +V+   V  M+ +  D L  
Sbjct: 203 NPGLEDEGR---AWFKKL--EQGDEQATALWTWFRE--VSLVEFSRVYEMLGVSFDSLNG 255

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
               +D               ++ +ID L  +  + E       S+     D++ + +  
Sbjct: 256 EAFYND--------------KMQHVIDLLEEKDLLVE-------SEGAMVVDLEAEGM-- 292

Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
                      P L  K DG+  Y   DLA    + E  GF+   YV+G + + + K+L 
Sbjct: 293 ----------PPALIKKKDGATLYATRDLAAAVYRLETYGFEQAFYVVGGEQALHFKQLF 342

Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           AV                          +S +K +I VLL E+++   +     ++++  
Sbjct: 343 AVLKKLGFENVDGMHHVPFGLIMKDGKKMSTRKGRI-VLLEEVLQDAINVAKQNIAEKNP 401

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464
           +         EVG  +V F  L  +    ++FD  + +K + +  P  YVQY  AR  S+
Sbjct: 402 NLANAEQTAREVGVGAVIFHDLKNERMNNIEFDLEQMLKFEGETGP--YVQYTNARANSL 459

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+        D   F  +        D     ++  L ++  VI+ A   +EP  ++ Y
Sbjct: 460 LRKGA-----YDGSAFNGSA-------DDYSWGVVSMLNQFSAVIDRAFTRREPSIISRY 507

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + DLA  F+ ++       ++R ++ +  K +  RL LV +V  ++  GL ++GV +P E
Sbjct: 508 VLDLAQSFNKYYG------QVRVLEDDAEKQS--RLALVKSVTIVLTEGLRLLGVGAPEE 559

Query: 585 M 585
           M
Sbjct: 560 M 560


>gi|189461674|ref|ZP_03010459.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136]
 gi|189431646|gb|EDV00631.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136]
          Length = 597

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 126/564 (22%), Positives = 225/564 (39%), Gaps = 111/564 (19%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHC 141
           KGF+NL ++     ++L+ I     ++G   I K T+    V IE+ S N   P+H+GH 
Sbjct: 81  KGFLNLTIASDVWVELLNRIHADA-QWG---IQKATEDAPLVMIEYSSPNTNKPLHLGHV 136

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE--- 198
           R  ++G+ LA++MA +G +V +   +ND G  I    L+  W     L   + + PE   
Sbjct: 137 RNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSG 189

Query: 199 -------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK------------DYSVQ 239
                  G Y   + KH   E+A+     L     E   P+++            D  ++
Sbjct: 190 KKGDHLIGDYYVAFDKHYKAEVAELMEKGLSKEEAEAQSPLMQEAREMLRKWEANDPEIR 249

Query: 240 AMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           A+ K + D          K + +  D I+   + +  G    +  +      +G+ Y   
Sbjct: 250 ALWKKMNDWVYAGFDETYKMMGVSFDKIYYESETYLEGKEKVLEGL-----EKGFFYR-- 302

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
               K   +   D+         T  G D  + LL++DG+  Y   D+   K +++    
Sbjct: 303 ----KEDGSVWADL---------TAEGLD-HKLLLRADGTSVYMTQDIGTAKLRFQDFPI 348

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI- 408
           + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM  R G  + 
Sbjct: 349 NKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMKSREGTVVD 405

Query: 409 ------TLRHVVDEVGSDSVRFMMLWRKNSE-------LLDFDFCKVKEQSKENPVF--- 452
                  +     E  S+  +   L ++ ++       L    +  +K  +++N  F   
Sbjct: 406 ADDLMEAMIETAKETSSELGKLDGLTKEEADDIARIVGLGALKYFILKVDARKNMTFNPK 465

Query: 453 -----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                      ++QY YAR +SI R+A +        +    VIP   E  T E  LI  
Sbjct: 466 ESIDFNGNTGPFIQYTYARIQSILRKAAEA------GITIPAVIPTGVELSTKEEGLIQM 519

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA++  V+  A     P  LA Y YDL   ++  +           ++  N  L + RL 
Sbjct: 520 LADFTNVVRQAGSDYNPSILANYAYDLVKEYNQFYHD------FSILREENEALKVFRLA 573

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L   V  I+   + ++G+E P  M
Sbjct: 574 LSQNVGKIVKLAMGLLGIEVPERM 597


>gi|315426742|dbj|BAJ48366.1| arginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 624

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 31/335 (9%)

Query: 27  KILDRIVIERPR-----DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV--D 79
           ++L  + + +PR     D   G +S++ A  L++  G  P+ +A+ +V R+ +   V  +
Sbjct: 10  RLLADVGVGQPRVSLAKDARFGDVSSSDAFDLAKKTGKKPVEMAKELVERMDLSRTVYVE 69

Query: 80  SVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
              +AG G+IN Y   P     I+S     G  YG   +G G  V +E  S NP   +H+
Sbjct: 70  RAEVAGAGYINFYARWPRLAADIVSEACEKGRSYGETGLGGGQYVLVEHTSVNPNKALHI 129

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R   +GD+LA L+  +GY V    YI+D+G Q+  L L+    ++   Y+ +    E
Sbjct: 130 GHARNVCLGDSLARLLKKNGYHVAVANYIDDSGVQMAELLLA----FKHLGYSMEPTKGE 185

Query: 199 GY--YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ----AMMKIIRDDLKA- 251
            +  Y G     V K +      E L       L      + Q     + +++ + L+  
Sbjct: 186 KFDEYCGRVYTEVSKRIEADPRLETLRRQLAAQLEDHDSETSQLNRLVVERVLMEQLRTC 245

Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             L  ++D+   E D    D     ++   L   G +Y     P K      C +     
Sbjct: 246 WRLGARYDVLNKESDILFFD--LWSEVFKRLREMGVLYVAEEGPKKG-----CWLFDLSG 298

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
             + +  GD+V   ++KSDGS TY A D  Y   K
Sbjct: 299 HPKLSKEGDEV---VVKSDGSTTYVARDFGYAAWK 330



 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 20/175 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470
            V +++   ++R+ ++     +++ FD  +  + +    P  Y+QYAYAR   I  +A D
Sbjct: 469 EVAEKIAVAAIRYFLIRADPDKMIVFDSEEASDIEGDTGP--YIQYAYARATRILEKA-D 525

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
             P+      P+N     +  D  E+ LI  +   P V E A       ++A YL +LA 
Sbjct: 526 TQPN------PQN---PPTTLDPKEIMLIKQIGMLPLVYEEAVRNLSVKRIATYLRELAF 576

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  + +         V + + K+ + RL LV A  S ++S  +  G+    EM
Sbjct: 577 AFNDFYENCP-------VLSADEKVKVFRLALVEAFRSAVSSAADAAGIPLVEEM 624


>gi|164425840|ref|XP_959285.2| arginyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|157071086|gb|EAA30049.2| arginyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 640

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 247/607 (40%), Gaps = 124/607 (20%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFI---AGKGFINLYLSPSYL-RKILSSIVVSGI 110
           R  G  P  +A+   A+    PD D +F      +  ++ ++  S L   ++  +   G 
Sbjct: 82  RVKGKKPDELAQEWAAKF---PDTDPLFTKPTVSQIHLSFFVKASPLVNAVIPMVQHKGA 138

Query: 111 EYGRNLI---------GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           EYG N            KG K + +EF S N   P H GH R  ++G  L++L A +G++
Sbjct: 139 EYGFNKADGLKDPKDPSKGQKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWD 198

Query: 161 VTREYYINDAGAQINTLALSVFWRY--QQALYNN------------DSDLPEGYYPGVYL 206
           V R  Y+ D G Q   LAL+ + +Y  ++AL  +            ++++          
Sbjct: 199 VIRINYLGDWGKQYGLLALA-YEKYGDEEALQKDPINHLFQLYVRINTEMTAEKEELTKR 257

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQH 256
           K  G++++    +  L+    ++   + D    A+        + I+R  D    LNI  
Sbjct: 258 KEAGEDVS-ALEANSLDEQARRYFKKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHF 316

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTM 315
           D +  E        + + ++++                     + C  D+  QL+  S +
Sbjct: 317 DEYSGESQVSEEAMNKVGNLMEE-------------------KKICKEDKGAQLIDFSEL 357

Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369
           V    G  +++PL+ K DG+  Y   D++    ++E+  FD MIYV+ S    ++++L  
Sbjct: 358 VPGKEGKRLEKPLVRKRDGTALYLTRDISELLGRHEKYNFDKMIYVVASAQDLHLRQLFK 417

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +   +  K        C+ +     G+ + MS R G    L  ++ +V +D +  +M   
Sbjct: 418 IIELLGYKDIADK---CQHINF---GLVLGMSTRKGTVKFLDDILRDV-ADKMHEVMKKN 470

Query: 430 KN-----------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARC 461
           +N           +++L      V++ S +   N  F              Y+QYA+AR 
Sbjct: 471 ENKYSQIEDPLATADVLGISSVMVQDMSGKRINNYTFNMETMTSFEGDTGPYLQYAHARL 530

Query: 462 RSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            SI R+A    +     D  L            +TS + L  H+A +P V++N     EP
Sbjct: 531 NSIRRKAGVSDEELATADLSLLT----------ETSAINLCRHMAGWPDVVKNTLKTLEP 580

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +  YL+ L       +   +       V  +  +L   RL L  AV +++ +G+ +IG
Sbjct: 581 TTVLTYLFKLTHALSSSYDQLQ-------VVGSEPELMKARLALYTAVQTVLANGMRLIG 633

Query: 579 VESPNEM 585
           +   + M
Sbjct: 634 LSPVDRM 640


>gi|84996665|ref|XP_953054.1| arginyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304050|emb|CAI76429.1| arginyl-tRNA synthetase, putative [Theileria annulata]
          Length = 632

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 181/424 (42%), Gaps = 79/424 (18%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+   LS  ++ + + S+   G    ++    G  V I+F S N    MHVGH R  V+
Sbjct: 107 GFMTFVLSNDWIEQEIRSLAKYGPSVDKSTEKHGETVVIDFSSPNIAKEMHVGHLRSTVI 166

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGV 204
           GD+LA ++ F GY+V R  ++ D G Q   L   +F +Y   L N  + SDL + Y    
Sbjct: 167 GDSLARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFLNNMPSISDLTKFYKEAK 226

Query: 205 YLKHVGKELADKYSSELLNFP---EEKWL--PIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
               V +E   K  S ++      EE  L   ++ D S+++  +I     K L+I  +IF
Sbjct: 227 LRMDVDEEFKKKSRSRVVRLQSGDEESKLVWKVLCDISLESFNRI----YKRLDINFEIF 282

Query: 260 ISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
             E  ++   P  ++D+ D  +A++    EG L                 ++F       
Sbjct: 283 -GESFYNDMIPEIVKDLQDRGIAQES---EGAL-----------------VIFTD---AS 318

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            V   L+KSDG + Y + DLA  + + ++   D +IYV     S +  +L         K
Sbjct: 319 SVPLMLVKSDGGFGYDSTDLACIRYRTQQLKADWIIYVTDIGQSEHFLKL--------FK 370

Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416
            AQI    CE VR+   G  +       K   R+GD + L  ++DE              
Sbjct: 371 SAQI-AGWCENVRIDHVGFGMVQNEFGEKFKTRSGDTVKLVDLLDEAVKRSKIELEKRDP 429

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      +G  S+++  L    +    F F K+ +  + N   Y+ Y+YAR   IF
Sbjct: 430 NIPNLDEIAEALGYGSIKYFDLNHSVTTNYKFSFDKMLD-PRGNTAVYMFYSYARICQIF 488

Query: 466 RQAK 469
           ++A+
Sbjct: 489 KKAQ 492


>gi|323948238|gb|EGB44226.1| arginyl-tRNA synthetase [Escherichia coli H120]
          Length = 462

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 208/501 (41%), Gaps = 80/501 (15%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   + W 
Sbjct: 2   VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGML---IAWL 58

Query: 185 YQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            +Q   N      +DL EG+Y            A K+  E   F E     +VK   +Q+
Sbjct: 59  EKQQQENAGEMELADL-EGFYRD----------AKKHYDEDEEFAERARNYVVK---LQS 104

Query: 241 MMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +  R+  + L    DI ++++   + R + +  RD +   +    +  GI+   K+K 
Sbjct: 105 GDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG 161

Query: 299 TQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y
Sbjct: 162 L-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLY 220

Query: 355 VMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + S    ++ +  A+   A  V E     + +   +  L +DG P K   RAG  + L 
Sbjct: 221 YIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM--LGKDGKPFKT--RAGGTVKLA 276

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            ++DE                           VG  +V++  L +  +    FD+  +  
Sbjct: 277 DLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML- 335

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+QYAY R  S+FR+A +I  +    L    VI +E      E QL   L +
Sbjct: 336 AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAAPVIIRED----REAQLAARLLQ 387

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   +        P+ +  YLYDLA +F G + H         + A N ++   RL+L  
Sbjct: 388 FEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH------CPILSAENEEVRNSRLKLAQ 441

Query: 565 AVASIINSGLNIIGVESPNEM 585
             A  +  GL+ +G+E+   M
Sbjct: 442 LTAKTLKLGLDTLGIETVERM 462


>gi|195553723|ref|XP_002076727.1| GD24677 [Drosophila simulans]
 gi|194202717|gb|EDX16293.1| GD24677 [Drosophila simulans]
          Length = 665

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 139/597 (23%), Positives = 252/597 (42%), Gaps = 101/597 (16%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ L   G++  P  IA  +       P ++ + IAG GF+N++LS  Y
Sbjct: 116 GDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDY 175

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               LS+++ +G+     +I K  +V ++F S N    MHVGH R  ++G++L  L+ F 
Sbjct: 176 ASSALSNLLRNGVT-PPEVIKK--RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 232

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
            ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E   
Sbjct: 233 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 292

Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
           +  S +++   +K +P  +K + +  +  + R + + +  + DI + E    RG+    S
Sbjct: 293 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISVKE----RGESFYQS 344

Query: 272 PIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +  +++ L  +G   V EG  I+ P  +KT                     +   ++KS
Sbjct: 345 RMLSVVEYLRGKGLLEVDEGREIMWPDDTKT--------------------GIPLTIVKS 384

Query: 328 DGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG +TY  +D+A  + + E    D +IYV+ S  S +   +   A    E+ A +N L  
Sbjct: 385 DGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH 440

Query: 387 EL------VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWR 429
            +      V L  DG   K   R+GD + L  ++DE            G D V      +
Sbjct: 441 RVDHVQFGVVLGEDGKKFKT--RSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELK 498

Query: 430 KNSELLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIF 472
              E L +      D C  +            + + N   Y+ Y Y R  SI R + + F
Sbjct: 499 DAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDF 558

Query: 473 PDLDFDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            +L   L   N V+  E E+  ++  L +H      ++   +     + L  + +++ +V
Sbjct: 559 TNLPEILKKTNIVLAHEKEWKLAKTLLKLH-----DILIKCSKELFLHFLCEFCFEVCTV 613

Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +       +N +   +  N+ ++ M       A A+++     I+G++  ++M
Sbjct: 614 FTEFYDSCYCIEKNKQGDIIAVNHSRILM-----CEATAAVLRQCFYILGLKPVSKM 665


>gi|18859963|ref|NP_573081.1| Arginyl-tRNA synthetase [Drosophila melanogaster]
 gi|20178140|sp|Q9VXN4|SYRC_DROME RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|7293140|gb|AAF48524.1| Arginyl-tRNA synthetase [Drosophila melanogaster]
 gi|17944966|gb|AAL48546.1| RE02962p [Drosophila melanogaster]
 gi|220947778|gb|ACL86432.1| Aats-arg-PA [synthetic construct]
          Length = 665

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 253/597 (42%), Gaps = 101/597 (16%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ L   G++  P  IA  +       P ++ + IAG GF+N++LS  Y
Sbjct: 116 GDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDY 175

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               LS+++ +G++    +I K  +V ++F S N    MHVGH R  ++G++L  L+ F 
Sbjct: 176 ASLALSNLLRNGVK-PPEVIKK--RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 232

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
            ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E   
Sbjct: 233 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 292

Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
           +  S +++   +K +P  +K + +  +  + R + + +  + DI + E    RG+    S
Sbjct: 293 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISVKE----RGESFYQS 344

Query: 272 PIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +  +++ L  +G   V EG  I+ P  +KT                     +   ++KS
Sbjct: 345 RMLSVVEYLRGKGLLEVDEGREIMWPDDTKT--------------------GIPLTIVKS 384

Query: 328 DGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG +TY  +D+A  + + E    D +IYV+ S  S +   +   A    E+ A +N L  
Sbjct: 385 DGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH 440

Query: 387 EL------VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWR 429
            +      V L  DG   K   R+GD + L  ++DE            G D V      +
Sbjct: 441 RVDHVQFGVVLGEDGKKFKT--RSGDTVKLSDLLDEGMKRSLQQLESRGRDKVLTPQELK 498

Query: 430 KNSELLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIF 472
              E L +      D C  +            + + N   Y+ Y Y R  SI R + + F
Sbjct: 499 DAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDF 558

Query: 473 PDLDFDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            +L   L   N V+  E E+  ++  L +H      ++   +     + L  + +++ +V
Sbjct: 559 TNLPEILKKTNIVLDHEKEWKLAKTLLKLH-----DILIKCSKELFLHFLCEFCFEVCTV 613

Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +       +N +   +  N+      R+ L  A A+++     I+G++  ++M
Sbjct: 614 FTEFYDSCYCIEKNKQGDIIGVNHS-----RILLCEATAAVLRQCFYILGLKPVSKM 665


>gi|71985068|ref|NP_001022552.1| aRginyl aa-tRNA syntheTase family member (rrt-1) [Caenorhabditis
           elegans]
 gi|51536889|gb|AAU05575.1| Arginyl aa-trna synthetase protein 1, isoform b, partially
           confirmed by transcript evidence [Caenorhabditis
           elegans]
          Length = 692

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 128/537 (23%), Positives = 233/537 (43%), Gaps = 71/537 (13%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPS 96
           G    N+AM ++  L  +     P  +A+ I A++    D V+ + +   GFIN++L+  
Sbjct: 163 GDYQCNSAMPIAAKLKANKINKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTD 222

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           YLR+ +S +   G++  + L  K  +V ++F S N    MHVGH R  ++GD++  L   
Sbjct: 223 YLRRQISLLASEGVKLPK-LTRK--RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEA 279

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G++V R  +I D G Q   L   ++ R+   L      LP+      + K   K     
Sbjct: 280 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFL----KKLPDISDLQAFYKESKKRF--- 332

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRD 275
              E   F +  +  +VK  S         D +KA N   D+    +   +      I+D
Sbjct: 333 --DEDEQFKKRAYEYVVKLQSHDG------DIVKAWNTICDVSKKYNQIVYNYLDIKIKD 384

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           +      + +  + ++   K   T K DM    D +Q++F +   G D+   ++KSDG +
Sbjct: 385 V-----GESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPT---GCDIPLTVVKSDGGF 436

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-------------GY----VKRLEAVAAA 373
           TY  +DLA  K +  E   D  IYV+ S  S             G+    ++R+E VA  
Sbjct: 437 TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496

Query: 374 V------------SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           +            S +  ++  LL E V+   + +  K  + A     L    D V    
Sbjct: 497 LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V++  L    ++   F F ++ E  + N   Y+ YAY R +SIF + +    DL   +  
Sbjct: 557 VKYADLSHTRTQDYVFSFDRMLE-DRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAS 615

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              +P +   +    + ++ L++   ++ ++ +    +++  Y+Y LA++FH  ++ 
Sbjct: 616 TPTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLML---HQMCDYVYQLATLFHDFYNE 669


>gi|329925160|ref|ZP_08280103.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939993|gb|EGG36326.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 620

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 47/347 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87
           I IE+P    HG  +TN AM L++ L   PL IAELI A ++ D      V S  I   G
Sbjct: 31  IRIEQPASMEHGDYATNVAMQLAKVLRKAPLQIAELIQAELEQDASYKQLVRSTEIVAPG 90

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+NL +   Y       +  +  E          K+ IE  S NP    H+GH R + +G
Sbjct: 91  FMNLRIDWEYWASHHFELPPAANE----------KIVIEHTSINPNKSAHIGHLRNSCIG 140

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           DTL  LM   GYEV    YI+D G Q+    + +        +    D     Y      
Sbjct: 141 DTLVRLMRKLGYEVEVHNYIDDLGNQLADTVVGLLHTPLTKEHARFGDYCWDVYSSTNKA 200

Query: 208 HVGKELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           +  +    ++ +E+L+  EE      W+ ++     + ++K   +++K   I++D+ + E
Sbjct: 201 YEREPGLVEHRTEVLHALEEGNQNLSWIGLL---VAERIVKEHLEEMKQFGIEYDLLVWE 257

Query: 263 DDFHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCDMDRKQLLFRS-TMVGD 318
                           ++ ++G+    +E +   P      +  +    +L +S T  GD
Sbjct: 258 ---------------SSIVKEGFWASAFELLKNTPLFHQETEGKLAGCWVLKQSGTEAGD 302

Query: 319 D------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +      +D+ L++S+G  TY A D+AY   KY    ++ +Y   +D
Sbjct: 303 EAESDHSIDKVLVRSNGILTYTAKDIAYHLWKYGVLSNDFVYKKFTD 349


>gi|195355443|ref|XP_002044201.1| GM22521 [Drosophila sechellia]
 gi|194129490|gb|EDW51533.1| GM22521 [Drosophila sechellia]
          Length = 665

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 217/510 (42%), Gaps = 88/510 (17%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ L   G++  P  IA  +       P ++ + IAG GF+N++LS  Y
Sbjct: 116 GDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDY 175

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               LS+++ +G+     +I K  +V ++F S N    MHVGH R  ++G++L  L+ F 
Sbjct: 176 ASSALSNLLRNGVT-PPEVIKK--RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 232

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
            ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E   
Sbjct: 233 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 292

Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
           +  S +++   +K +P  +K + +  +  + R + + +  + DI + E    RG+    S
Sbjct: 293 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISVKE----RGESFYQS 344

Query: 272 PIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +  +++ L  +G   V EG  I+ P  +KT                     +   ++KS
Sbjct: 345 RMLSVVEYLRGKGLLEVDEGREIMWPDDTKT--------------------GIPLTIVKS 384

Query: 328 DGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG +TY  +D+A  + + E    D +IYV+ S  S +   +   A    E+ A +N L  
Sbjct: 385 DGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH 440

Query: 387 EL------VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWR 429
            +      V L  DG   K   R+GD + L  ++DE            G D V      +
Sbjct: 441 RVDHVQFGVVLGEDGKKFKT--RSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELK 498

Query: 430 KNSELLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIF 472
              E L +      D C  +            + + N   Y+ Y Y R  SI R + + F
Sbjct: 499 DAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDF 558

Query: 473 PDLDFDLFPRN-VIPQESEFDTSELQLIVH 501
            +L   L   N V+  E E+  ++  L +H
Sbjct: 559 TNLPEILKKTNIVLAHEKEWKLAKTLLKLH 588


>gi|72383390|ref|YP_292745.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|109895017|sp|Q46HI6|SYR_PROMT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72003240|gb|AAZ59042.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 607

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 139/609 (22%), Positives = 243/609 (39%), Gaps = 114/609 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYL-SPSY 97
           G    N A+ L++ +   P  IA+ I  +++ D D     +   IAG GFINL + S + 
Sbjct: 47  GDFQINCALSLAKEIKQPPREIAQKIANQLQKDNDFVRMCNPPRIAGPGFINLSINSKTL 106

Query: 98  LRKI------------LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           + +I            L       IE G++      +V ++F S N    MHVGH R  +
Sbjct: 107 ISEIHVRLNDKRLGVPLKKFSTDKIEEGKS----NNRVILDFSSPNIAKEMHVGHLRSTI 162

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYY 201
           +GD+LA ++ F GYEV R  ++ D G Q   L   +     + L+  D    SDL   Y 
Sbjct: 163 IGDSLARILEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYR 222

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                    +   +K  SE++N        ++   + Q +    R + + +  + DI ++
Sbjct: 223 QAKKRFDEDQIFQNKSRSEVVNLQAGDKESLI---AWQLLCNQSRKEFQKIYDRLDIKLT 279

Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           E    RG+      + D+I++L  +  +                +    Q +F   +VG 
Sbjct: 280 E----RGESFYNKFLVDVINDLKNKKLL---------------INDQGAQCIFLDGLVGK 320

Query: 319 DVD-RPLL--KSDGSYTYFAADLAYFKCK-----YERGFDNMIYVMGSDHSGYVKRLEAV 370
           +   +P++  KSDG + Y   DLA  K +     +  G   +IYV  +  + +   +  +
Sbjct: 321 NGKPQPIIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQI 380

Query: 371 AAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
           A   +      QI  +   LV+   DG   K+  R+G+ I L  ++DE            
Sbjct: 381 AKLANWIPTDCQIEHVPFGLVQ-GEDGK--KLKTRSGETIRLVDLLDEAIQRAKNDLKNR 437

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  S+++  L +       F F K+    + N   Y+ YA
Sbjct: 438 LNTERRSENENFIDKVSTTVGIASIKYADLSQNRISNYQFSFDKMLSL-QGNTAPYLLYA 496

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQ 516
             R   I R+  D+           NV     +F+ S E +LI  L +   +I       
Sbjct: 497 LVRIAGISRKGGDL-----------NVSSHNIQFNESQEWELIRKLLQLDYIIAEVEKEL 545

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P +L  YL++L+  F+  +    + P L+  + +       RL L    A  +  G+++
Sbjct: 546 LPNRLCGYLFELSQTFNRFYD---QVPILKASEPSR----ASRLILCSITADTLKLGMSL 598

Query: 577 IGVESPNEM 585
           +G+ +   M
Sbjct: 599 LGIPTLERM 607


>gi|227540420|ref|ZP_03970469.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239744|gb|EEI89759.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 594

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 122/582 (20%), Positives = 239/582 (41%), Gaps = 112/582 (19%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + E + +RI   P++ S F   KGF+N+ LS +Y  ++L+S +++  ++G      G K+
Sbjct: 65  VGEFLQSRI---PEL-SGFNVIKGFLNVSLSDNYWIELLNSTLLAS-DFG-CFPANGKKL 118

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSV 181
            +E+ S N   P+H+GH R  ++G ++A ++   GY+V +   +ND G  I  + LA   
Sbjct: 119 MVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAYGYDVIKANLVNDRGIHICKSMLAWQK 178

Query: 182 FWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           F   +  A      D   G Y  ++ K   K++ +  +        +K  P++++   Q 
Sbjct: 179 FGNGETPASSGLKGDHLVGKYYVIFDKEYKKQIDELKAEGQTEEEAKKNAPLIRE--AQE 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M++                     +  GD   I ++   +   G+VY G     K+    
Sbjct: 237 MLQ--------------------QWEAGDQQVI-ELWSTM--NGWVYSGF---EKTYNQL 270

Query: 301 KCDMDRKQLLFRSTMVGDDV----------------------------DRPLLKSDGSYT 332
             D D+      + ++G D+                             + +L+ DG+  
Sbjct: 271 GVDFDKYYYESNTYLLGKDIIQEGLDSGVFFKKEDNSVWIDLTDEGLDQKLVLRGDGTSV 330

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ----------- 380
           Y   DL   + KY E   +  IYV+G++   + K L  +   + +  A            
Sbjct: 331 YITQDLGTAQLKYDEFHMNESIYVVGNEQDYHFKVLFLILKKLGKSWASGLFHLSYGMVD 390

Query: 381 ---------------INVLLCELVRLYRDGMPIKMSKRAGDFITLR-HVVDEVGSDSVRF 424
                           + L+ E+V   ++    ++ K  G   T +  + + +G  ++++
Sbjct: 391 LPSGKMKSREGTVVDADDLMSEMVETAKERTE-ELGKTEGFSETEKAELYNTIGMGALKY 449

Query: 425 MMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
            +L     + L FD  + V  Q    P  ++QY +AR +S+  +A               
Sbjct: 450 FLLKVDPKKRLLFDPNESVDFQGHTGP--FIQYTHARIKSVLNKA---------GFSEAT 498

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + + +   + E  LI  L  +P VIE +     P +LA Y+YD+A +++  +       
Sbjct: 499 PVTKPASISSYERDLIQVLGNFPVVIEASAKEFSPAQLANYIYDVAKLYNKFYHEE---- 554

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++A   ++   RL L    A +I+ G+N++G++ P  M
Sbjct: 555 --SILKAEEEEVKNFRLHLSATAARVISKGMNLLGIQVPERM 594


>gi|303233657|ref|ZP_07320311.1| arginine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495091|gb|EFL54843.1| arginine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 564

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 235/571 (41%), Gaps = 90/571 (15%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-- 110
           L++     P  IAE +  +   + ++  +   G  ++N +++ S   K++ S++   I  
Sbjct: 46  LAKTFRKAPNLIAEDLAQKEFQNENIKKIANVGP-YVNFFVNNS---KLIESVLTEAIKD 101

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++G + IG G  V ++F S N   P H+GH R  V+G+ + ++M   G+  T   YI D 
Sbjct: 102 DFGSSHIGVGKNVVLDFSSTNIAKPFHIGHLRSTVIGNAIRNIMKHQGFNTTGVNYIGDY 161

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G Q   + +S + ++      N   + E     V    + KE  + Y  E  +     W 
Sbjct: 162 GTQFG-MMISAYLKWGDENKINADPIKELLNLYVKYNKIAKE-DETYMDEARD-----WF 214

Query: 231 PIV--KDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             +  KD +   +    R+  LK     +D+   + D   G+    + I D L       
Sbjct: 215 DKLEKKDPTAVKLWSWFREISLKEFQRVYDLLGVKFDNFNGESFHSQFIGDALEA----- 269

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRP---LLKSDGSYTYFAADLA- 339
                           +D+K LL  S     +  DD + P   + KS+GS TY   D+A 
Sbjct: 270 ----------------IDKKNLLEESDGAMIINLDDENLPPVLIKKSNGSSTYLTRDIAT 313

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA----------------AAVSEKKAQI 381
             Y K  Y+  F   +YV+ S    + ++L AV                   VS K   +
Sbjct: 314 AMYRKKTYD--FYKNVYVVASQQKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSM 371

Query: 382 N------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
                  + L +++    D     + +R  +      V  +VG  +V F  L+    +  
Sbjct: 372 KTREGKVIFLEDVLNRAIDKTKSIIEERNPNLENKEEVAKQVGVGAVIFQDLFNNRIKDY 431

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTS 494
            FD+ +V     E    Y QY +AR  SI  + + ++  +  FDL            D +
Sbjct: 432 TFDWDQVLNFDGETGP-YTQYTFARSCSILDKGEFELKDNSKFDLL----------VDDT 480

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E+ ++ HL+++  V+ NAT   EP  L  Y  +LA +F+  +++         +     +
Sbjct: 481 EIDIVKHLSKFEEVLLNATEKYEPSFLTRYTVELAKLFNKFYANCP-------INTAEDE 533

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   RL L ++V   +   L+++G+E+P  M
Sbjct: 534 LKYQRLYLTYSVNKCLKLSLSLLGIEAPVRM 564


>gi|166031101|ref|ZP_02233930.1| hypothetical protein DORFOR_00786 [Dorea formicigenerans ATCC
           27755]
 gi|166028948|gb|EDR47705.1| hypothetical protein DORFOR_00786 [Dorea formicigenerans ATCC
           27755]
          Length = 588

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 139/611 (22%), Positives = 244/611 (39%), Gaps = 116/611 (18%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA+ +VA+++       V     GFINL L  
Sbjct: 33  RPDLCEY---QCNGAMAGAKAYHKAPIMIAQDVVAKLEGSGCFCDVQAVNPGFINLKLDE 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            ++   L  +     + G N       + I++   N   P+HVGH R A++G+++  +  
Sbjct: 90  RFVADYLDEMETDE-DLGLNKTDNPKMIVIDYGGPNVAKPLHVGHLRSAIIGESVKRISR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG-----------V 204
             G+ V  + ++ D G Q+  +   +  R  +  Y +++   +G YP            +
Sbjct: 149 KMGHNVLGDIHLGDWGYQMGLIITELKERKPELPYFDEN--FKGEYPAEAPFTISELEEI 206

Query: 205 YLKHVGKELADK-------YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA----LN 253
           Y    GK   D+       +++ LL    + +  I        +M +  +DLK     LN
Sbjct: 207 YPTASGKAKEDEEYRERALHATYLLQNGHKGYTAIW-----NHIMHVSVNDLKKNYANLN 261

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +  D++  E D      + I D+I+ L ++G+ +                +D   L+   
Sbjct: 262 VDFDLWKGESDAQ----AYIPDMIERLKKEGFAH----------------VDDGALVIDV 301

Query: 314 TMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEA 369
               D  + P   + KSDG+  Y   DLA    + E    D +IYV+        + L  
Sbjct: 302 QEESDTKEIPPCMIQKSDGASLYGTTDLATLVQRVEDYHPDKVIYVVDKR-----QELHF 356

Query: 370 VAAAVSEKKAQINVLLCELVRLY------RDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V    + KK  I     EL  L       +DG P K   R G  + L +++ E+  +   
Sbjct: 357 VQVFRAAKKTGIVPSETELKFLGFGTMNGKDGKPFKT--REGGVMRLENLIAEIQEE--- 411

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLD-FDLFP 481
              +++K +     D   V+E+  +N    V  A  +   +  QA KD   D+D F  F 
Sbjct: 412 ---MYKKIT-----DNRTVEEEEAKNTAKTVGMAAIKYGDLSNQASKDYVFDVDRFTSFE 463

Query: 482 RNVIP----------------QE-----------SEFDTSELQLIVHLAEYPRVIENATI 514
            N  P                QE            +   SE  L++ L +Y  ++ENA  
Sbjct: 464 GNTGPYILYTIVRIKSILNKYQEEGKAVTGLKVNQQSGESEKALMLALVKYNEMMENAYE 523

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+K+  Y+YDLA+ F+ H+ H       + +   N       + L+     ++ S +
Sbjct: 524 ELAPHKICAYIYDLANAFN-HFYH-----ETKILAEENEAKKQGYIALLILTKKVLESCI 577

Query: 575 NIIGVESPNEM 585
           +++G E+P  M
Sbjct: 578 DVLGFEAPERM 588


>gi|168214506|ref|ZP_02640131.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714040|gb|EDT26222.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 565

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 225/545 (41%), Gaps = 103/545 (18%)

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ + I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKE-QSKENPVFYVQYAYARCR 462
                  V  ++G  ++ F  L  KNS   D  FD+ ++   + +  P  YVQY+YAR +
Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFEGETGP--YVQYSYARAK 456

Query: 463 SIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           SI R+A  ++I  + DF                 E +L   L    + +       EP  
Sbjct: 457 SILRKAEEQNITAEPDFTKLT----------SKEEFELAKTLDGLQKAVVLGIDKLEPSV 506

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +IG++
Sbjct: 507 VTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLIGID 560

Query: 581 SPNEM 585
              +M
Sbjct: 561 VVEKM 565


>gi|307193340|gb|EFN76202.1| Arginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 683

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 143/611 (23%), Positives = 258/611 (42%), Gaps = 104/611 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +++    +   G    N+AM L++ L      + P  +A  I+++++    VD   IAG 
Sbjct: 120 VIVTTSNNLKFGDYQCNSAMPLAQHLSSSGIKVIPRNVANNIISKLEESFLVDKYEIAGP 179

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+YL   + +  L+S +  G      +  K  +V ++F S N    MHVGH R  ++
Sbjct: 180 GFINIYLKRDFGQYTLNSWLKKGDVPPPCVQRK--RVIVDFSSPNIAKEMHVGHLRSTII 237

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+++ L+ + G++V R  +I D G Q   L   +    Q    N  +  P    P   L
Sbjct: 238 GDSISRLLEYLGHDVLRINHIGDWGTQFGMLIAHL----QDKFPNYSTVAP----PIQDL 289

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSV--------QAMMKIIRDDLKALNIQHDI 258
           +   KE   ++ ++  NF +  +  +VK  ++        Q +  + R + + L  + DI
Sbjct: 290 QAFYKESKTRFDTD-ENFKKRAYECVVKLQALEPEITKAWQMICDVSRQEFQKLYTRLDI 348

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            I E    RG+    + +           E ++   +SK   + D  RK       M G+
Sbjct: 349 KIIE----RGESFYQKHM-----------ELVVKKLESKNMLEEDNGRK------IMWGE 387

Query: 319 DVDR----PLLKSDGSYTYFAADLAYFKCKYERGFDN----MIYVMGSDHSGYVKRLEAV 370
             D      ++KSDG +TY  +D+A  K + E    +    +IYV  +  S + + LE+ 
Sbjct: 388 KRDSGIPLTIVKSDGGFTYDTSDMAALKQRIEDERADWASILIYVTDAGQSLHFQMLESC 447

Query: 371 A--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
              A + +   +++ +   +V L  D    K   R+GD + L  ++DE            
Sbjct: 448 GRRAGILKSNHRMDHVGFGVV-LGEDKKKFKT--RSGDTVKLIELLDEGLKRALQKLKEK 504

Query: 417 ------------VGSDSVRFM------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                       +  +SV +       ++  +N E + F F K+ E  K N   Y+ YA 
Sbjct: 505 ERDKVLSEEELKMAQESVAYGCIKYADLVHNRNHEYI-FSFDKMLE-DKGNTAVYLLYAL 562

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R RSI R A ++  D         ++  E E    E +L   L ++P V+ N +     
Sbjct: 563 TRIRSIARMA-NVTQDELRKHAHDTLVSLEHE---KEWKLAKVLLKFPDVLLNISQDMYL 618

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINSGL 574
           ++L  + Y+++  F   +       +   V+ N      K+ M RL L  A A ++    
Sbjct: 619 HQLCEFCYEISCAFTEFYD------KCYCVEKNQAGEIVKVNMGRLLLTEATAIVMGKCF 672

Query: 575 NIIGVESPNEM 585
            ++G++    M
Sbjct: 673 ALLGLKPVTRM 683


>gi|288871500|ref|ZP_06117831.2| arginine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288863223|gb|EFC95521.1| arginine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 607

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 116/576 (20%), Positives = 233/576 (40%), Gaps = 92/576 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117
           P+ IA  +V ++        V     GFIN+ L   YL   ++++      G E  +  +
Sbjct: 73  PIDIANEVVEKLSGGDIFSEVNAVMPGFINIKLEAGYLATYMNNMREEDQCGCEKAKTPL 132

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                + +++  AN   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +
Sbjct: 133 ----TIIVDYGGANVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLI 188

Query: 178 ALSVFWRYQQALYNNDS-------DLP------EGYYPGVYLKHVGKELADKYSSELLNF 224
              +  R  +  Y +++       + P      E  YP    K    E     + E    
Sbjct: 189 IEELRDRKPELAYFDETYTGEYPKEAPFTIGELEEIYPAASAKSKTDEEFSARAHEATLK 248

Query: 225 PEEKWLP--IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN--- 279
            +  + P   + ++ +   +  ++ +   LN+  D++  E D     P  I+++ +    
Sbjct: 249 LQNGYAPYRAIWNHIIDVSVTDLKKNYGNLNVSFDLWKGESDAQAYIPGLIQELEEKKLA 308

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
              QG +   I  P  SK    C       + R             KSDG+  Y  +DL 
Sbjct: 309 YESQGALVVDIAEPGDSKELPPC-------IIR-------------KSDGAALYSTSDLG 348

Query: 340 YFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
               + E+ F    Y+  +D     H   V R+   A  V E++   ++    +    +D
Sbjct: 349 TI-LEREKEFCPDWYIYITDKRQELHFTQVFRVAKKAGFVPEERKMSHLGFGTMNG--KD 405

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVK 443
           G P K   R G  + L  ++ ++ + +   +M  R  SE           +    +  + 
Sbjct: 406 GKPFKT--RDGGVMRLETLISDIDAAAYEKIMENRTVSEEEALKTSKIVGMAALKYGDLS 463

Query: 444 EQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
            Q+ ++ +F              Y+ Y   R +SI  +A D+       +   +++P  S
Sbjct: 464 NQASKDYIFDMDRFVSFEGNTGPYILYTIVRIKSILAKASDLEVQ---GVCTGDILPAVS 520

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               +E  L++ L++Y  VIE + +   P+K+  Y+Y+LA+ F+  +         + + 
Sbjct: 521 ---GAEKDLMLQLSKYNEVIETSFMELAPHKICQYVYELANAFNRFYHD------TKIIA 571

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N K     L L+     ++ + ++++G+E+P  M
Sbjct: 572 EENEKQRASWLSLISLAKDVLTACIDLLGIEAPERM 607


>gi|14601607|ref|NP_148147.1| arginyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|7674354|sp|Q9YB39|SYR_AERPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5105446|dbj|BAA80759.1| arginyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 644

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 225/596 (37%), Gaps = 134/596 (22%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           G++N+      L   +  ++ SG         +   + +E  SANP  P+H+GH R + +
Sbjct: 86  GYLNIVFDVEKLGDEVFRLLASGWRPSTARTSRPETIVVEHTSANPIHPLHLGHARNSSL 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLAL----------------------SVFWR 184
           GD LA L+   G+ V R +Y++D G Q    +L                      +V W 
Sbjct: 146 GDALARLLEARGHRVNRRFYVDDVGRQAVVASLGFKLSGVTPRELASRMGVKVDHAVGWV 205

Query: 185 Y---QQAL-------YNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL--LNFPEEKWLP 231
           Y     AL         + S + E       LK  G +E+ D+    +  L+ PE     
Sbjct: 206 YAVTHNALETVTARKRGDTSKVDEALSTLARLKERGDREVFDRILEAVGSLDDPEGLVSE 265

Query: 232 IVKDYS-------------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           +++ Y              V A+++  R+ L    +  D +  E D        +  II+
Sbjct: 266 MMRKYERGEEPEKSLIRGVVSAVLEGFRETLGRFGVDFDDWDWESDLLWS--GLVNKIIE 323

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDR--KQLLFRSTMVGDDVDRP---------LLKS 327
              R  ++          K     D+ R  +++L R       +  P         L++S
Sbjct: 324 EARRSPFLT-------THKDAIALDIPRIVREVLARDPEAASTIKLPRSLEIPPLILVRS 376

Query: 328 DGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   DLAY   K+   G D +I V+G+D      ++      +  ++  +N++  
Sbjct: 377 DGTTLYTTRDLAYSVYKFRVTGADRVINVIGADQRLPQLQIRLALLGLGYRREALNMMHY 436

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVD--------EV-----GSD------------- 420
           +   +   G   +MS R G+++TL  +++        EV     G+D             
Sbjct: 437 DYEIVSLPGR--RMSSRRGEYVTLDELLEMAKARSVREVESRNPGADRDWIESTAEKIAV 494

Query: 421 -SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +VRF ++     + +  D  ++ +  KEN   Y+QY YAR  SI  +  +I      D 
Sbjct: 495 GAVRFALVRPGRLKPITLDVERILDL-KENTAPYLQYTYARASSILEKHGEI------DY 547

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA---------- 529
              +    E   + S  +L V    +P V   A     P  LA YL  LA          
Sbjct: 548 LKAHPASLE---EGSRRELFVEALRFPLVSAKAADDLAPEDLASYLLRLADMFNSWYQKD 604

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           SV H  W   R                  +  LV  V S+I  GL ++GVE   +M
Sbjct: 605 SVIHEEWEGARH----------------AKAALVLLVKSVIGEGLRLLGVEPLEKM 644


>gi|302380344|ref|ZP_07268814.1| arginine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311834|gb|EFK93845.1| arginine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 564

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 227/542 (41%), Gaps = 90/542 (16%)

Query: 83  IAGKG-FINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           IA  G ++N +++ S   K++ S++   I  ++G + IG G  V  +F S N   P H+G
Sbjct: 74  IANVGPYVNFFVNNS---KLVESVLTEAIKDDFGSSHIGVGKNVVFDFSSTNIAKPFHIG 130

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R  V+G+ + ++M + G+  T   YI D G Q   + +S + ++      N + + E 
Sbjct: 131 HLRSTVIGNAIRNIMKYQGFNTTGVNYIGDYGTQFGMM-ISAYLKWGDEDKINANPIKEL 189

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDYSVQAMMKIIRD-DLKALNIQH 256
               V    + KE  + Y  E  +     W   +  KD +   +    R+  LK     +
Sbjct: 190 LNLYVKYNKIAKE-DETYMDEARD-----WFDKLEKKDPTAVKLWSWFREISLKEFQRVY 243

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--- 313
           D+   + D   G+    + I D L                       +D+K LL  S   
Sbjct: 244 DLLGVKFDNFNGESFHSQFIGDALEA---------------------IDKKNLLEESDGA 282

Query: 314 -TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  DD + P   + KS+GS TY   D+A   Y K  Y+  F   +YV+ S    + ++
Sbjct: 283 MIINLDDENLPPVLIKKSNGSSTYLTRDIATAMYRKKTYD--FYKNVYVVASQQKLHFEQ 340

Query: 367 LEAVA----------------AAVSEKKAQIN------VLLCELVRLYRDGMPIKMSKRA 404
           L AV                   VS K   +       + L +++    D     + +R 
Sbjct: 341 LRAVLKKMGFDWWKDCEHVSFGMVSMKDGSMKTREGKVIFLEDVLNRAIDKTKSIIEERN 400

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
            +      V  +VG  +V F  L+    +   FD+ +V     E    Y QY +AR  SI
Sbjct: 401 PNIENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGETGP-YTQYTFARSCSI 459

Query: 465 FRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             + + ++  +  FDL            D +E+ ++ HL+++  V+ NAT   EP  L  
Sbjct: 460 LDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFEEVLLNATEKYEPSFLTR 509

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y  +LA +F+  ++    N  +  V+    +L   RL L ++V   +   L+++G+E+P 
Sbjct: 510 YTVELAKLFNKFYA----NCPINTVE---DELKYQRLYLTYSVNKCLKLSLSLLGIEAPV 562

Query: 584 EM 585
            M
Sbjct: 563 RM 564


>gi|323343491|ref|ZP_08083718.1| arginine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095310|gb|EFZ37884.1| arginine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 606

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 239/572 (41%), Gaps = 106/572 (18%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHV 138
           S F   KGF+NL ++ S    +L+SI      +G  +    +  V IE+ S N   P+H+
Sbjct: 75  SSFNVVKGFLNLNIARSAWIDLLNSIDTDD-NFGLKIATDSSPLVMIEYSSPNTNKPLHL 133

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W---RYQQALYNNDS 194
           GH R  ++G +LA +M  +G  V +   +ND G  I    L+   W      Q+      
Sbjct: 134 GHVRNNLLGWSLARIMEANGNRVVKTNIVNDRGIHICKSMLAWLKWGNGETPQSSGKKGD 193

Query: 195 DLPEGYYPGV--YLKHVGKELADKYSSELLNFPEEK-----WLPIVKDYSVQAMMKIIRD 247
            L   YY     + K   K+L  +Y ++ ++  E +       P++K+ + + ++K  ++
Sbjct: 194 HLIGDYYVAFDKHYKEQCKQLEAQYKAQGMSDEEAEKKAATEAPLMKE-AHEMLVKWEQN 252

Query: 248 D--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           D  ++AL  + + ++          +   +  D L   G  ++ I     +    K  ++
Sbjct: 253 DPEVRALWQKMNTWVY---------AGFNETYDKL---GVCFDKIYYESDTYLVGKAKVE 300

Query: 306 ---RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYERGF--DNM 352
              +K +  R       + +  D +DR LL +SDG+  Y   D+     ++ R F  D M
Sbjct: 301 EGLKKGIFMREADNSVWADLTDDGLDRKLLLRSDGTSVYMTQDIGTATMRF-RDFPIDKM 359

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--------------------------LLC 386
           IYV+G++ + + + L  +   +  K  +  V                          L+ 
Sbjct: 360 IYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGMVELPNGKMKSREGTVVDADDLIA 419

Query: 387 ELVRLYRDGMPIKMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN-----SE 433
            +V+  RD      S   G F  +     R +   VG  ++++ +L    RKN      E
Sbjct: 420 GMVKEARD-----TSDELGKFKDMSEEEKREIARIVGLGALKYFILKVDARKNMLFNPEE 474

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            +DF+          N   ++QY YAR RSI R+A     D D  +     +   +  + 
Sbjct: 475 SIDFN---------GNTGPFIQYTYARIRSIMRKA-----DADSHIALPEKLDGNAPLNE 520

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E++LI  + E+   +  A     P  +A Y Y+L   F+  +           + AN  
Sbjct: 521 KEIELIQKMNEFETAVAEAGNNYNPAGIANYCYELTKDFNQFYHD------YSILSANTE 574

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  ++RL +   VA II +G++++G+E P  M
Sbjct: 575 EEKIVRLVIAKNVAKIIKNGMDLLGIEVPERM 606


>gi|330928443|ref|XP_003302265.1| hypothetical protein PTT_14014 [Pyrenophora teres f. teres 0-1]
 gi|311322493|gb|EFQ89647.1| hypothetical protein PTT_14014 [Pyrenophora teres f. teres 0-1]
          Length = 646

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 135/573 (23%), Positives = 223/573 (38%), Gaps = 112/573 (19%)

Query: 89  INLYLSPSYLRKILSSIVV-SGIEYGRNL----------IGKGTKVNIEFVSANPTGPMH 137
           I  +  P  L  ++  +V+ S  +YG N                K+ +EF S N   P H
Sbjct: 107 IGFFFKPETLTSLVVPMVIKSKDDYGFNKNFGLKNPLDPSSGAKKMIVEFSSPNIAKPFH 166

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL- 196
            GH R  ++G  LA+L   +G++V R  Y+ D G Q   LA+         LY N+ +L 
Sbjct: 167 AGHLRSTIIGGFLANLYERAGWDVVRMNYLGDWGKQYGVLAIGF------DLYGNEEELV 220

Query: 197 --PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
             P G+   +Y+K     H   E       E+    EE      KD S Q   KI + + 
Sbjct: 221 KNPIGHLYDIYVKVSNVQHQEAEEMKALKEEVAKLNEEG-----KDASEQEN-KIKKIET 274

Query: 250 KALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + ++ Q   +        G+P  +      RD+     +Q Y    I     S  +Q  D
Sbjct: 275 EGIDEQARKYFK--GMVDGEPKALGIWKRFRDLSIEKYKQTYARLNIHYDDYSGESQVKD 332

Query: 304 --MDRKQLLFRSTMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKY 345
             M+    +     V  D +  ++                K DG+  Y   D+     + 
Sbjct: 333 ESMELAAKIMWEKGVCQDSEGAVIVDLTPHSKKLGKAVIKKKDGTSLYLTRDIGAAIERV 392

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIK 399
           E+  FD MIYV+ S    ++ +L  +        +SEK   IN            GM + 
Sbjct: 393 EKYHFDKMIYVVASQQDLHLAQLFKIEELMGRKDISEKCQHINF-----------GMVLG 441

Query: 400 MSKRAGDFITLRHVVDEVG--------SDSVRFMMLW--RKNSELLDFDFCKVKEQSKE- 448
           MS R G    L  ++ +VG        ++  ++  +    K ++ L      V++   + 
Sbjct: 442 MSTRKGTAKFLDDILRDVGDKMHEVMRTNETKYAQVKDPEKTADTLGISAVMVQDMKGKR 501

Query: 449 --NPVF--------------YVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEF 491
             N  F              Y+QYA+AR  SI+R+A D  P L + DL     +    E 
Sbjct: 502 INNYTFDMDRMTSFEGDTGPYLQYAHARLCSIYRKAVDADPSLEEIDLASAADLSLLKE- 560

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
               ++L+  LA +P    N    QEP  +  YL+ +A      + H +       V  +
Sbjct: 561 -DKAVELVRQLASWPDTFVNTLKTQEPTTVLTYLFKMAHALSSSYDHLQ-------VVGS 612

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            + + + RL L  A   ++ +G+ ++G+ SP E
Sbjct: 613 EKNVLIARLALYVAARQVLYNGMKVLGL-SPVE 644


>gi|110798607|ref|YP_696348.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110673254|gb|ABG82241.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 565

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%)

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ + I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463
                  V  ++G  ++ F  L  KNS   D  FD+ ++     E    YVQY+YAR +S
Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457

Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517
           I R+A  ++I  + DF       +  + EF+         LA+    ++ A I      E
Sbjct: 458 ILRKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +I
Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 558 GIDVVEKM 565


>gi|256269431|gb|EEU04726.1| Msr1p [Saccharomyces cerevisiae JAY291]
          Length = 643

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 134/583 (22%), Positives = 235/583 (40%), Gaps = 114/583 (19%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K + K+LA +          S E   F   
Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INKDLAKEEINGNSKCGISGEARGFFKN 290

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I   +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L            +D  Q    S  +G  V   + KSDG+  Y   D+ 
Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432
            MS R G+ + L  ++DE    +++ M   +                          K+ 
Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+    DF          
Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552

Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542
            S  +  +L +L+  LA+YP V+  A   QEP  +  YL+     ++S +   W  G+  
Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKP- 610

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                       + + RL +  A   ++++ ++++G+   + M
Sbjct: 611 ----------ADIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643


>gi|316974934|gb|EFV58402.1| arginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1083

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 125/554 (22%), Positives = 235/554 (42%), Gaps = 126/554 (22%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG------LDPLTIAELIV----ARIKIDPD---V 78
           I+I       HG    N+ M +++ L       + P  +AE IV      ++++ +   +
Sbjct: 54  IIITETSSEKHGDYQFNSCMAIAKFLSNSHSTKISPRKVAEEIVNVLMTTVQLEKEKSLI 113

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           + + IAG GF+N++L+ + + + +  I V+G+   +  +    +V ++F S N    MHV
Sbjct: 114 EKIEIAGPGFLNIFLNFNAVHQRIFDIFVNGV---KPPVLPAKRVVVDFSSPNIAKEMHV 170

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----S 194
           GH R  ++GD +  L+ F G++V R  ++ D G Q   L   +  R+    Y N+    +
Sbjct: 171 GHLRSTIIGDCICRLLEFCGFDVLRLNHVGDWGTQFGMLIAHLKDRFPN--YQNEPPHLA 228

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           DL   Y          KE   ++ ++             +++  +A+ ++++  L+A   
Sbjct: 229 DLQSFY----------KESKVRFDAD-------------EEFKSRALKEVVK--LQA--- 260

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
                      H  +      +I  L+R G +              + D  RK ++F   
Sbjct: 261 -----------HEPEQIKAWTLICQLSRHGLL--------------EIDEGRK-IVFPE- 293

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
             G      ++KSDG YTY  +DLA  K + +E   D ++YV+ +    + +++  V   
Sbjct: 294 --GCSTPLTIVKSDGGYTYDTSDLAALKHRLFEEKADWVLYVVDAGQGLHFQQIFTVGKQ 351

Query: 374 V---SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
           +   +E   ++  +   LV L  D    K   R+G+ + L  +++E              
Sbjct: 352 LGWWNENSHRVQHIAFGLV-LGEDKR--KFRTRSGETVKLSDLLEEGMRRSAATLKEKQR 408

Query: 417 ----------VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                     +   SV +  +        RKN  +  FD  K+ E  K N   Y+ YAY+
Sbjct: 409 DQVLSPKELDIAQRSVAYGCIKYADLSHNRKNDYVFSFD--KMLED-KGNTAVYLLYAYS 465

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518
           R RSI R A     ++  +     +   E  FD   EL+L+  + ++P ++ +      P
Sbjct: 466 RMRSISRNA-----NVSRENLQEKIHCGEISFDHPKELKLMKMIIKFPDIMSHVVENFLP 520

Query: 519 YKLAFYLYDLASVF 532
             +  Y+Y+LA+VF
Sbjct: 521 NLICDYIYNLATVF 534


>gi|168207505|ref|ZP_02633510.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168216948|ref|ZP_02642573.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|170661125|gb|EDT13808.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|182380942|gb|EDT78421.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 565

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%)

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ + I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463
                  V  ++G  ++ F  L  KNS   D  FD+ ++     E    YVQY+YAR +S
Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457

Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517
           I R+A  ++I  + DF       +  + EF+         LA+    ++ A I      E
Sbjct: 458 ILRKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +I
Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 558 GIDVVEKM 565


>gi|110803183|ref|YP_698948.1| arginyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110683684|gb|ABG87054.1| arginine--tRNA ligase [Clostridium perfringens SM101]
          Length = 565

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%)

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ + I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDKVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463
                  V  ++G  ++ F  L  KNS   D  FD+ ++     E    YVQY+YAR +S
Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457

Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517
           I R+A  ++I  + DF       +  + EF+         LA+    ++ A I      E
Sbjct: 458 ILRKAEEQEITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +I
Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 558 GIDVVEKM 565


>gi|259146846|emb|CAY80102.1| Msr1p [Saccharomyces cerevisiae EC1118]
          Length = 617

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 134/583 (22%), Positives = 236/583 (40%), Gaps = 114/583 (19%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 92  DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 150

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 151 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 210

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K +  +LA +          S E  +F   
Sbjct: 211 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 264

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I   +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 265 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 323

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L            +D  Q    S  +G  V   + KSDG+  Y   D+ 
Sbjct: 324 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 363

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 364 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 416

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432
            MS R G+ + L  ++DE    +++ M   +                          K+ 
Sbjct: 417 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 476

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+    DF          
Sbjct: 477 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIRADF---------- 526

Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542
            S  +  +L +L+  LA+YP V+  A   QEP  +  YL+     ++S +   W  G+  
Sbjct: 527 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKP- 584

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                       + + RL +  A   ++++ ++++G+ S + M
Sbjct: 585 ----------ADIAIPRLAVYSASRQVLHNAMSLLGLVSVDRM 617


>gi|153854644|ref|ZP_01995894.1| hypothetical protein DORLON_01889 [Dorea longicatena DSM 13814]
 gi|149752748|gb|EDM62679.1| hypothetical protein DORLON_01889 [Dorea longicatena DSM 13814]
          Length = 544

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 131/583 (22%), Positives = 234/583 (40%), Gaps = 107/583 (18%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117
           P  IAE +VA +K    ++ V +   GFIN+ L  +++   L+ +  +   GI+   N  
Sbjct: 11  PFMIAEDVVALLKDSACMEEVEVVKPGFINIRLKKAFVADYLNQMEEAEDLGIQKAEN-- 68

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                + +++   N   P+HVGH R A++G+++  +    G+EV  + ++ D G Q+  +
Sbjct: 69  --PEMIVVDYGGPNVAKPLHVGHLRSAIIGESVKRIARKMGHEVLGDIHLGDWGYQMGLI 126

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPG-----------VYLKHVGKELADK-------YSS 219
              +  R  +  Y ++S   EG YP            +Y    GK   D        +++
Sbjct: 127 ITELKERKPELPYFDES--FEGEYPKEAPFTISELEEIYPTASGKAKEDDAYRENALHAT 184

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
            LL      +  I  ++ +   +  ++ +   LN+  D++  E D      + I D+ID 
Sbjct: 185 YLLQNGHRGYRAIW-NHIINVSVSDLKRNYANLNVSFDLWKGESDAQ----AYIPDMIDK 239

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336
           L + G+ +E                D+  L+       D  + P   + KSDG+  Y   
Sbjct: 240 LKKDGFAHE----------------DQGALVIDVQEETDTKEIPPCMIQKSDGASLYGTT 283

Query: 337 DLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRL-- 391
           DLA    + E    D +IYV+        KR E     V  S KK  I     EL  L  
Sbjct: 284 DLATLVQRVEDYHPDKVIYVVD-------KRQELHFTQVFRSAKKTGIVPAETELKFLGF 336

Query: 392 ----YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM--------LWRKNSELLD--- 436
                +DG P K   R G  + L  ++ E      + +           RK + ++    
Sbjct: 337 GTMNGKDGKPFKT--REGGVMRLETLISETAEKMYKKISENHAIEEEEARKTANMIGVAA 394

Query: 437 FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
             +  +  Q+ ++ VF              Y+ Y   R +SI  + +     LD      
Sbjct: 395 LKYGDLSNQASKDYVFDVDRFISFEGNTGPYILYTIVRIKSILHKYQAQGNSLD------ 448

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            +  QE+  D  E  L++  A+Y  VI NA     P+K+  Y+YDLA+ F+  +      
Sbjct: 449 GLKVQEAHADC-EKALMLEAAKYNDVIANAFQDLAPHKICAYIYDLANAFNRFYH----- 502

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + +   N +     + L+     ++   ++++G E+P  M
Sbjct: 503 -ETKILGEENAEKQKSYIALLKVTKDVLEGCIDVLGFEAPERM 544


>gi|114564914|ref|YP_752428.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122298448|sp|Q07WM5|SYR_SHEFN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114336207|gb|ABI73589.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 581

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           RI ++R +D +HG L+TN AM+L++    +P  +A+LI+  +     V  V IAG GFIN
Sbjct: 29  RIQVDRTKDKSHGDLATNLAMMLTKVAKKNPRELAQLIIDTLPASSYVAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++  + L   L   + S    G  L  K T V +++ S N    MHVGH R  ++GD++
Sbjct: 89  FFIDDNALANQLQQALTSD-HLGVALPTKQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
              + + G+ V R+ ++ D G Q   L
Sbjct: 147 VRALEYLGHNVIRQNHVGDWGTQFGML 173



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D  TL  +   VG  SV++  L +  +    F F ++    + N   Y+ YAY R   IF
Sbjct: 419 DEATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++A DI  DL      + V+  E E D     L   LA++  V+   T    P+ L  YL
Sbjct: 478 KRATDI--DLSQ---AKIVLEHEKEKD-----LGTKLAQFGEVLTRMTDKGLPHVLCGYL 527

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LAS F   +      P L    A        RL L    A  + +GL+++G+E+   M
Sbjct: 528 YELASEFSSFY---EACPVL---AAETEAQKQSRLLLAQLTAKTLKTGLSLLGIETLERM 581


>gi|302386694|ref|YP_003822516.1| arginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197322|gb|ADL04893.1| arginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 589

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 127/578 (21%), Positives = 232/578 (40%), Gaps = 96/578 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117
           P  IA   VA++       SV     GFINL L+  YL + +  +      G E   N +
Sbjct: 55  PFDIASEAVAKLTGSHVFASVDAVMPGFINLKLNSDYLAEYVDGMAGQEQCGCERTENPM 114

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                + +++  AN   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +
Sbjct: 115 ----TIVVDYGGANVAKPLHVGHLRSAIIGESIKRMGRFLGHQVIGDVHLGDWGLQMGLI 170

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPG-----------VYLKHVGKELADKYSSELLNFPE 226
              +  R  +  Y + S   EG YP            +Y     K  +D+  S   +   
Sbjct: 171 IEELKDRKPELPYFDPS--FEGEYPKEAPFTIGELEEIYPAASAKAKSDEEFSTRAHDAT 228

Query: 227 EKWLPIVKDYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
            K     + Y    Q ++++   DLK     LN+  D++  E D    +P  I  +I  L
Sbjct: 229 LKLQNGFRPYRAIWQHIIEVSVADLKNNYGNLNVSFDLWKGESD---AEPY-IAGLIKEL 284

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAAD 337
             QG  YE                 +  L+      GD  + P   + KSDG+  Y  +D
Sbjct: 285 EDQGLAYE----------------SQGALVVDIAEEGDPKELPPCIVRKSDGAALYSTSD 328

Query: 338 LAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           L     + E+      Y+  +D     H   V R+   A  VS+ K   +  LC      
Sbjct: 329 LGTI-IEREKEIKPDWYIYLTDKRQELHFVQVFRVAKKAGFVSQDKKMSH--LCFGTMNG 385

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCK 441
           +DG P K   R G  + L  ++ ++   +   +M  R  SE           +    +  
Sbjct: 386 KDGKPFKT--RDGGVMRLETLISDISQAAYEKIMENRTVSEKEAEETSKIVGMAALKYGD 443

Query: 442 VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           +  Q+ ++ VF              Y+ Y   R +SI  + + I      +     ++  
Sbjct: 444 LSNQASKDYVFDMDRFVSFEGNTGPYILYTIVRIKSILAKYQGIEDKYQGE---EKILAA 500

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            +E   +E  L++ L+ Y  ++E       P+K+  Y+Y+LA+ F+  +         + 
Sbjct: 501 ATE---AEKDLMLQLSRYNEIMETGFTELAPHKICQYIYELANAFNRFYHD------TKI 551

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   ++K     ++L+     ++N+ + ++G+E+P  M
Sbjct: 552 ITEEDKKRQASWVRLIGLAKDVLNACIGVLGIEAPERM 589


>gi|270295355|ref|ZP_06201556.1| arginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274602|gb|EFA20463.1| arginyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 605

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 141/627 (22%), Positives = 266/627 (42%), Gaps = 120/627 (19%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   ++ +    + F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVAAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I     +YG   +   +  V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHADK-QYGIVAVTDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++A +G +V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 145 LANIVAANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDD--L 249
            Y   + KH     KEL  K+ SE +N  E K       P++K+ + + ++K   +D  +
Sbjct: 198 DYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAEAESPLMKE-AREMLVKWEANDPEV 256

Query: 250 KAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDR 306
           +AL   +   ++   D+ +R     +    D +  +   Y EG     K K  +  +   
Sbjct: 257 RALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESNTYLEG-----KEKVMEGLE--- 304

Query: 307 KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
           K   +R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D MIYV+G
Sbjct: 305 KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVG 364

Query: 358 SDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           ++ +                          G V+  E    +        + L+ E++  
Sbjct: 365 NEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIDT 424

Query: 392 YRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELLDFD 438
            ++     G    ++K   D     ++   VG  ++++ +L    RKN      E +DF+
Sbjct: 425 AKETSNELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESIDFN 479

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                     N   ++QY YAR +S+ R+AK+   ++   L      P   E    E  L
Sbjct: 480 ---------GNTGPFIQYTYARIQSVLRKAKEAGIEIPAQL------PAGIELSEKEEGL 524

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           I  +A++  +++ A     P  +A Y YDL   ++  +           ++  N  + + 
Sbjct: 525 IQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAVKVF 578

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L   VA ++  G+ ++G+E P+ M
Sbjct: 579 RLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|322711579|gb|EFZ03152.1| arginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 648

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 128/572 (22%), Positives = 232/572 (40%), Gaps = 107/572 (18%)

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRN----------LIGKGTKV 123
           DP  D   ++G  F++ ++    L + I+  +  +G ++G+N          L     ++
Sbjct: 102 DPLFDKPVLSGH-FMSFFVKGEPLTESIIPLVRKAGKDFGKNRFNGLRDPKDLSSGKKRI 160

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EF S N   P H GH R  ++G  +A+L   +G++V R  Y+ D G Q   LALS   
Sbjct: 161 IVEFSSPNVAKPFHAGHLRSTIIGSFIANLYEANGWDVVRMNYLGDWGKQYGLLALSYER 220

Query: 184 RYQQALYNNDSDLPEGYYPGVYL----------------KHVGKELADKYSSELLNFPEE 227
              +   N +   P  +   +Y+                K  GK+++   ++ L     +
Sbjct: 221 NGNEEELNKN---PIDHLFKLYVQINAEMSAEKEAIEEQKKEGKDVSALEANSLDEQARQ 277

Query: 228 KWLPIV-KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  +  +D +V A  +  RD            LNIQ D F  E        S + D + 
Sbjct: 278 YFRRMTDRDETVLAQWQRFRDLSIARYKETYSRLNIQFDEFSGESQVSEESMSKVADEMK 337

Query: 279 --NLARQ--GYV---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             N++R+  G V   +  +LP  + K                  +G  V   L K DG+ 
Sbjct: 338 EKNISREDKGAVLVDFTQLLPGKEGKR-----------------LGTTV---LRKRDGTA 377

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV-- 383
            Y   D+     +YE+  FD+MIYV+ S    ++K+L  +        +++K   IN   
Sbjct: 378 LYLTRDVCELLGRYEKYNFDHMIYVVASQQDLHLKQLFQIIELLGYKDIAKKCQHINFGL 437

Query: 384 ------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLW 428
                        L ++++   D M   M K    +  + +     D +G  SV    + 
Sbjct: 438 VLGMSTRKGTVKFLDDILKDCADHMHETMKKNEEKYAQVENPDATADTLGISSVMVQDMS 497

Query: 429 RKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            K      F+   +   +    P  Y+QYA+AR  SI R+A     D D D    +++ +
Sbjct: 498 GKRINNYTFNMEAMTSFEGDTGP--YLQYAHARLCSIKRRAN--LTDEDLDSANLSLLKE 553

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           +       + ++  L+++P V++N     EP  +  YL+ +  V    + H +       
Sbjct: 554 DHA-----VNIVRMLSQWPDVLQNTLKTLEPTTVLTYLFKMTHVISSSYDHLQ------- 601

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           V  + R+L   R+ L  A  + + +G+ I+G+
Sbjct: 602 VVGSERELMKSRMALYDAARTTLANGMRILGL 633


>gi|167757738|ref|ZP_02429865.1| hypothetical protein CLOSCI_00069 [Clostridium scindens ATCC 35704]
 gi|167664620|gb|EDS08750.1| hypothetical protein CLOSCI_00069 [Clostridium scindens ATCC 35704]
          Length = 588

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 128/603 (21%), Positives = 241/603 (39%), Gaps = 100/603 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IAE +   +K    ++ V     GFIN+ L  
Sbjct: 33  RPDLCEY---QCNGAMAGAKAYKKAPIMIAEAVAENLKDSRCIEEVNAVKPGFINMKLRN 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            Y+   L+ +     E G     +   + +++   N   P+HVGH R A++G+++  +  
Sbjct: 90  DYVAGFLNDMGADD-ELGVEKAKEPKMILVDYGGPNVAKPLHVGHLRSAIIGESIKRIAR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG-----------V 204
             G+EV  + ++ D G Q+  +   +  R  Q  Y +D+   +G YP            +
Sbjct: 149 KMGHEVLGDIHLGDWGYQMGLIITELRERKPQLPYFDDN--FQGEYPSEAPFTISELEEI 206

Query: 205 YLKHVGKELADK-YSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           Y     K   D+ Y  E LN         +    V ++ +   +  ++ +   LN++ D+
Sbjct: 207 YPTASQKAKEDETYREEALNATYLLQNGHRGYTAVWNHIMNISVADLKRNYANLNVEFDL 266

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D      + I D+I+ L ++GY +                +D   L+       D
Sbjct: 267 WKGEADAQ----AYIPDMIERLKKEGYAH----------------IDEGALVIDVQEETD 306

Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAA 373
             + P   + KSDG+  Y   DLA    + E  +  D +IYV+  D    +  L+   A+
Sbjct: 307 TKEVPPCMIQKSDGASLYGTTDLATL-VQREADYHPDKIIYVV--DKRQELHFLQVFRAS 363

Query: 374 VSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              KK  I      L  L       +DG P K   R G  + L +++ E+  +  + +  
Sbjct: 364 ---KKTGIVPEETHLRFLGFGTMNGKDGKPFKT--REGGVMRLENLIAEIEEEMYKKIAE 418

Query: 428 WRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCR 462
            R  +E           +    +  +  Q+ ++ VF              Y+ Y   R +
Sbjct: 419 NRTVAEDEAKETAKIVGMSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIK 478

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI  + +      +        +  ES  + SE  L++ +A+Y  V+E A     P+K+ 
Sbjct: 479 SILNKYQAQGKSFEG-------LAIESAHNESEKALMLEVAKYNEVMETAYEELAPHKVC 531

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+YD+A+ F+  +         + +   N       + L+     ++ + ++++G E+P
Sbjct: 532 AYIYDVANAFNRFYHE------TKILSEENEARQKSYIALLILAKKVLEACIDVLGFEAP 585

Query: 583 NEM 585
             M
Sbjct: 586 ERM 588


>gi|219685128|ref|ZP_03539948.1| arginine--tRNA ligase [Borrelia garinii Far04]
 gi|219673224|gb|EED30243.1| arginine--tRNA ligase [Borrelia garinii Far04]
          Length = 585

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 146/618 (23%), Positives = 255/618 (41%), Gaps = 96/618 (15%)

Query: 11  LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +KN +  I   + + K I LD+I I  ++P     G +S      LS+ L L    I+E 
Sbjct: 9   IKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLELPIANISEE 67

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I+  +K   ++     A   ++N+ +    Y+   +  +      YG +      K+ +E
Sbjct: 68  IIKTLKAKYEIK----AMGPYLNIKIPRKEYINNTIQMVNAQKDSYGTSKYLDNKKIILE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWR 184
           F S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I  + LA   F  
Sbjct: 124 FSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGN 183

Query: 185 Y---QQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               ++A    D  + E Y    Y K+  + E A+K   +LL   E+K    +K +    
Sbjct: 184 DITPEKAFKKGDHLIGEFYIE--YNKYSQENENAEKEIQDLLLKWEQKDANTIKLWEKLN 241

Query: 241 MMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPP 293
              I  I++  K  NI  D I++  + F  G     ++++     +G+ Y+     I   
Sbjct: 242 KWAIEGIKETYKITNISFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICID 296

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
             S   +K +   KQ             + L++S+G+  Y   DL     +  E  FD M
Sbjct: 297 LPSDADEKAEAKAKQ-------------KVLIRSNGTSIYLTQDLGNIAIRTKEFNFDEM 343

Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IYV+GS+   + K L  V+  +   K  Q+  L   +V L  DG   KM  R G+ I   
Sbjct: 344 IYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLI-DG---KMKSREGNVIDGD 399

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ E                         +   ++ + +L  K++   D  F K +  S
Sbjct: 400 NLISELIESIMPEITQKIDNKESAKKNALNIALGAIHYYLL--KSAVHKDILFNKKESLS 457

Query: 447 -KENPVFYVQYAYARCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
              N   Y+QY  AR  SI  +    +  I   ++F+L               E ++I  
Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPIIKKINFELLKH----------EKEWEIIKI 507

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           ++E    I  A     P  LA Y Y LA  F  ++        ++ +  NN  LT  R++
Sbjct: 508 ISELEETIIKAAKDLNPSILANYSYSLAKHFSAYYQ------EVKVIDINNIDLTAARIE 561

Query: 562 LVHAVASIINSGLNIIGV 579
            + A+   I + ++++ +
Sbjct: 562 FLKAILQTIKNCMHLLNI 579


>gi|18310643|ref|NP_562577.1| arginyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|23822195|sp|Q8XJU2|SYR_CLOPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18145324|dbj|BAB81367.1| arginine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 565

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%)

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ + I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDKVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463
                  V  ++G  ++ F  L  KNS   D  FD+ ++     E    YVQY+YAR +S
Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457

Query: 464 IFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517
           I R+A++  I  + DF       +  + EF+         LA+    ++ A I      E
Sbjct: 458 ILRKAEEQKITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +I
Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 558 GIDVVEKM 565


>gi|11271708|pir||T49760 probable cytosolic arginine-tRNA ligase [imported] - Neurospora
           crassa
          Length = 647

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 133/601 (22%), Positives = 245/601 (40%), Gaps = 124/601 (20%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFI---AGKGFINLYLSPSYL-RKILSSIVVSGI 110
           R  G  P  +A+   A+    PD D +F      +  ++ ++  S L   ++  +   G 
Sbjct: 82  RVKGKKPDELAQEWAAKF---PDTDPLFTKPTVSQIHLSFFVKASPLVNAVIPMVQHKGA 138

Query: 111 EYGRNLI---------GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           EYG N            KG K + +EF S N   P H GH R  ++G  L++L A +G++
Sbjct: 139 EYGFNKADGLKDPKDPSKGQKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWD 198

Query: 161 VTREYYINDAGAQINTLALSVFWRY--QQALYNN------------DSDLPEGYYPGVYL 206
           V R  Y+ D G Q   LAL+ + +Y  ++AL  +            ++++          
Sbjct: 199 VIRINYLGDWGKQYGLLALA-YEKYGDEEALQKDPINHLFQLYVRINTEMTAEKEELTKR 257

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQH 256
           K  G++++    +  L+    ++   + D    A+        + I+R  D    LNI  
Sbjct: 258 KEAGEDVS-ALEANSLDEQARRYFKKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHF 316

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTM 315
           D +  E        + + ++++                     + C  D+  QL+  S +
Sbjct: 317 DEYSGESQVSEEAMNKVGNLMEE-------------------KKICKEDKGAQLIDFSEL 357

Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369
           V    G  +++PL+ K DG+  Y   D++    ++E+  FD MIYV+ S    ++++L  
Sbjct: 358 VPGKEGKRLEKPLVRKRDGTALYLTRDISELLGRHEKYNFDKMIYVVASAQDLHLRQLFK 417

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +   +  K        C+ +     G+ + MS R G    L  ++ +V +D +  +M   
Sbjct: 418 IIELLGYKDIADK---CQHINF---GLVLGMSTRKGTVKFLDDILRDV-ADKMHEVMKKN 470

Query: 430 KN-----------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARC 461
           +N           +++L      V++ S +   N  F              Y+QYA+AR 
Sbjct: 471 ENKYSQIEDPLATADVLGISSVMVQDMSGKRINNYTFNMETMTSFEGDTGPYLQYAHARL 530

Query: 462 RSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            SI R+A    +     D  L            +TS + L  H+A +P V++N     EP
Sbjct: 531 NSIRRKAGVSDEELATADLSLLT----------ETSAINLCRHMAGWPDVVKNTLKTLEP 580

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +  YL+ L       +   +       V  +  +L   RL L  AV +++ +G+ +IG
Sbjct: 581 TTVLTYLFKLTHALSSSYDQLQ-------VVGSEPELMKARLALYTAVQTVLANGMRLIG 633

Query: 579 V 579
           +
Sbjct: 634 L 634


>gi|261210003|ref|ZP_05924302.1| arginyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840949|gb|EEX67486.1| arginyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 592

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 132/604 (21%), Positives = 242/604 (40%), Gaps = 104/604 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG +P   A+ ++  + ++       IAG GFIN++
Sbjct: 42  LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 101

Query: 93  LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS  +L     + +     G+  E  + ++        ++ + N    MHVGH R  ++G
Sbjct: 102 LSEEFLAAQAEAALADERLGVAPEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVY 205
           D +   + F G+ V R  +I D G Q   L ++   R Q+A      +L   E +Y    
Sbjct: 155 DAVVRTLEFLGHNVIRANHIGDWGTQFGML-IANLERVQKASGEVSMELSDLEAFY---- 209

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKALNIQHDIFISED 263
                K+L D+         +E++    ++Y V  Q       D  K L +   +  ++ 
Sbjct: 210 --RESKKLYDE---------DEQFAETARNYVVKLQGGDAFCLDMWKKL-VDVTMIQNQR 257

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---G 317
           ++ R + S  R+ +   +    +Y  +LP   S    K    + D  Q++F        G
Sbjct: 258 NYDRLNVSLTRENVMGES----MYNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFKNKDG 313

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369
           + +   + K DG + Y   D+A  K +YE  G D ++Y + S    +       V++   
Sbjct: 314 EPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGY 373

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +   VS +     ++L       +DG P K   RAG  + L  ++DE   D  +  ++  
Sbjct: 374 IPEEVSLEHHAFGMMLG------KDGRPFK--TRAGGTVRLADLLDE-AEDRAK-ALIES 423

Query: 430 KNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARC 461
           KN EL           +     K  + SK                  N   Y+QYAY R 
Sbjct: 424 KNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRV 483

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+F +A      +D +    ++   E +    E  LI  L ++   +++     +P+ +
Sbjct: 484 ASVFAKA-----GVDMNELAGHIQITEEK----EKALIAKLLQFEEAVQSVAREGQPHIM 534

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL++LA +F   +           + A    +   RL+L    A  I  GL ++G+++
Sbjct: 535 CSYLFELAGIFSSFYEA------CPILVAEQESVKQSRLKLAALTAKTIKQGLALLGIDT 588

Query: 582 PNEM 585
              M
Sbjct: 589 LERM 592


>gi|260910414|ref|ZP_05917086.1| arginine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635490|gb|EEX53508.1| arginine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 605

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 128/575 (22%), Positives = 235/575 (40%), Gaps = 125/575 (21%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P+    +L+ I  S   +G   + + +  V +E+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTIAPAAWISLLNRID-SEPRFGEKTVNEQSPLVMVEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----- 199
           ++G +LA +M  +G  V +   +ND G  I    L+  W+        +S   +G     
Sbjct: 140 LLGWSLAQIMEANGNRVVKTNIVNDRGIHICKSMLA--WKKWGNGATPESTGKKGDHLIG 197

Query: 200 -YYPGVYLKHVGKELAD---KYSSELLN-----FPEEKWLPIVK------------DYSV 238
            YY   + +H   ELA+   K+ +E +         ++  P++K            D  V
Sbjct: 198 DYYV-AFDQHYRAELAELTAKFKAEGMTDEEAEKRAKEESPLMKEAHDMLVRWEQGDEEV 256

Query: 239 QAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           +A+ K + D          KA+ +  D    E + +             L  +  V EG+
Sbjct: 257 RALWKKMNDWVYQGFDETYKAMGVGFDKIYYESETY-------------LEGKAKVEEGL 303

Query: 291 LPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFK 342
                           K L FR       + +  + +D+ LL ++DG+  Y   D+    
Sbjct: 304 ---------------AKGLFFRKPDGSVWADLSNEGLDQKLLLRADGTSVYMTQDIGTAD 348

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI--- 398
            ++ +   D MIYV+G++ + + + L  +   +  K  +      ELV      + +   
Sbjct: 349 LRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGK------ELVHFSYGMVELPNG 402

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--------------FDFCKVKE 444
           KM  R G  +    +++E+ S + R      K +++ +                +  +K 
Sbjct: 403 KMKSREGTVVDADDLMEEMVSAARRTSEELGKFADMTENERNEIARIVGMGALKYFILKV 462

Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            +++N +F              ++QY YAR RSI R+A     + +  + P  V+P    
Sbjct: 463 DARKNMLFNPEESIDFNGNTGPFIQYTYARIRSIMRKA-----EAEGIVLP-TVLPDTLP 516

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  E+QLI  L  +  V+E A     P  +A Y Y+L   F+  +           + A
Sbjct: 517 LNEKEVQLIQKLNSFEAVVEQAGKDYSPSGIANYCYELTKDFNQFYHD------YSILNA 570

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +   +RL L   VA  I +G+ ++G+E P  M
Sbjct: 571 ESGEAKTLRLALAKNVAKTIKNGMQLLGIEVPERM 605


>gi|33239664|ref|NP_874606.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|39932096|sp|Q7VE03|SYR_PROMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33237189|gb|AAP99258.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 603

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 138/610 (22%), Positives = 250/610 (40%), Gaps = 120/610 (19%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L+R +   P  IAE+++ +++ +    ++     IAG GFINL L  + L
Sbjct: 47  GDFQINGALALARIIKKSPRQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCL 106

Query: 99  RKILSSIV---VSGIEYGRN--LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              ++S +   + G+    +  +  K   V ++F S N    MHVGH R  ++GD++A +
Sbjct: 107 INEITSRLNDDLLGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARI 166

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + + GY+V R  ++ D G Q   L   +     +AL   +            + ++G  L
Sbjct: 167 LNYRGYKVIRLNHVGDWGTQFGMLITHLKEVAPKALTTAN------------VINLGN-L 213

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--------------QHDIF 259
            + Y      F E+++        V  + +  ++ LKA  +              +  I 
Sbjct: 214 VEFYKKAKQRFDEDEYFQQCSRNEVVNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIE 273

Query: 260 ISEDDFHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           ISE    RG+   +P ++ +ID+L R G + E                D  + +F + + 
Sbjct: 274 ISE----RGESFYNPFLQGVIDDLTRSGLLVED---------------DGAKCVFLNGIN 314

Query: 317 GDDVD-RPLL--KSDGSYTYFAADLAYFKCKYE-----RGFDNMIYVMGSDHSGYVKRLE 368
           G D +  PL+  K+DG + Y   DLA  + + +      G   +IYV  S  + +   + 
Sbjct: 315 GKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRIIYVTDSGQANHFAGVF 374

Query: 369 AVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416
            VA  A      ++I  +   LV+   DG   K+  R+G+ + L+ ++DE          
Sbjct: 375 QVAKRAKWLPSSSRIEHVPFGLVQ-GEDGK--KLKTRSGETVRLKDLLDEAISRAKLDIE 431

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +G  +V++  L +       F F ++    + N   Y+ 
Sbjct: 432 RRLNEENRKESQAFIEKVSNTIGIAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLL 490

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA  R   I R+  D+   ++   F     PQ       E +LI  L ++  VI      
Sbjct: 491 YAVVRIAGINRKGGDLHSSVNKLNFSE---PQ-------EWRLIRELLKFDEVIIAVEEE 540

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P +L  YL++L+ VF+  +    + P L+  + +       RL L       +  GLN
Sbjct: 541 LLPNRLCNYLFELSQVFNRFYD---QIPVLKAEEPSRS----CRLALCQLTGDTLKKGLN 593

Query: 576 IIGVESPNEM 585
           ++G+ +   M
Sbjct: 594 LLGISTLERM 603


>gi|169342733|ref|ZP_02863774.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169299239|gb|EDS81309.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 565

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 128/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%)

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++   ++ + I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463
                  V  ++G  ++ F  L  KNS   D  FD+ ++     E    Y+QY+YAR +S
Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YIQYSYARAKS 457

Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517
           I R+A  ++I  + DF       +  + EF+         LA+    ++ A I      E
Sbjct: 458 ILRKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +I
Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557

Query: 578 GVESPNEM 585
           G++   +M
Sbjct: 558 GIDVVEKM 565


>gi|27904724|ref|NP_777850.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29611877|sp|P59483|SYR_BUCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|27904121|gb|AAO26955.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 578

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 138/612 (22%), Positives = 245/612 (40%), Gaps = 118/612 (19%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGK-GFI 89
           + I R  D        N  + L+  L  +P  +++ I++ ++  +  +     A K GFI
Sbjct: 27  LAIVRTSDKKVWDYQVNGIIKLANNLNKNPYVLSKYIISNMRYYEYKMYKKITASKLGFI 86

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVG 147
           N++++ ++L K L+      I+  R  I K T  NI  ++ S N    MHVGH R  ++G
Sbjct: 87  NIFINKTWLEKELTK----KIKSFRLGIKKVTPKNIIIDYSSPNVAKKMHVGHLRSTILG 142

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVY 205
           D  A ++ F G+ V R  +I D G     +    + +     YN  N  DL E Y     
Sbjct: 143 DATARILEFLGHNVMRINHIGDWGTHFGMII--AYLKQNFISYNEINQLDLNELYQKAKV 200

Query: 206 LKHVGKELADKYSSELLNFPEEK------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
              +  E + K  + ++   ++       W  IVK  ++    KI +     L  +H   
Sbjct: 201 NFDLDSEFSKKTRNYVVKLQKKDKECIRIWKKIVKK-TITENQKIYKKLNVTLTNKH--- 256

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           I  + F+  D  P  DII +L  +             K  ++C  +   ++F +     D
Sbjct: 257 IVGESFY-NDMLP--DIIQDLKTK-------------KIAKQC--NGAYIVFLNKFKNRD 298

Query: 320 ---VDRPLLKSDGSYTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              +   + K DG++ Y   DLA  K  C+  R  D ++Y + S    Y+K++  +A   
Sbjct: 299 GAPMGVIIQKQDGAFLYSTIDLACLKYRCEVLRA-DQILYFIDSRQKEYLKQILEIAKKA 357

Query: 375 SEKKAQINV------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
                 I +      ++C      ++  P   S R+G+ I L  +++E            
Sbjct: 358 GYISNNIIIRHNEFGMICS-----KNKRP--FSTRSGNNIILSDLINEAIKRAKKIAKNK 410

Query: 417 ---------------VGSDSVRFMMLWR--------KNSELLDFDFCKVKEQSKENPVFY 453
                          +G  ++++  L +        K  E+L FD          N   Y
Sbjct: 411 NKNLSNKELEYLSEKIGIGAIKYFDLSKNRLTDYIFKWDEILTFD---------GNTAPY 461

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  SIF++      ++       N+I  E      E +L + L ++  +I  + 
Sbjct: 462 MQYAYIRILSIFKKL-----NISMLKLSGNIILTE----LLENKLAIKLFQFEEIILESL 512

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YLY+L+ +F   +       +    ++ N K+   RL L    A  +  G
Sbjct: 513 QHSAPHIICKYLYELSKIFSKFY------EKCSIYKSKNTKIRKNRLLLSLLTARTLKKG 566

Query: 574 LNIIGVESPNEM 585
           L IIG+ +   M
Sbjct: 567 LFIIGISTIKYM 578


>gi|326803379|ref|YP_004321197.1| arginine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650808|gb|AEA00991.1| arginine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 563

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 138/292 (47%), Gaps = 60/292 (20%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  FD  +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYMTRDLAAVFYRKRTYD--FDQCLYVVGNEQSVHFKQLKAVIKEMGYDWYDDI 357

Query: 371 -----------AAAVSEKKAQINVL---LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                         +S +K ++ +L   L E +RL +     +++ +  D      V + 
Sbjct: 358 HHIPFGLITQGGKKLSTRKGKVVLLESVLKEAIRLAQK----QINSKNPDLTDKDQVAEA 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           VG  +V F  L  KN  L +FDF     V+ + +  P  YVQYA AR +SI R+A    P
Sbjct: 414 VGVGAVVFHDL--KNDRLNNFDFQLEEVVQFEGETGP--YVQYANARAQSILRKANAGKP 469

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD DL       Q S  D     ++  L  +P +I  A  + EP  +A Y   LA  F+
Sbjct: 470 RLD-DL-------QLS--DDESYAVVKQLNRFPEIIAKAYESYEPSVIAKYTLQLAQRFN 519

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++H R       V   + +L   RL LV+AV+ ++  GL ++GV++P EM
Sbjct: 520 KYYAHTR-------VLEEDDQLNA-RLALVYAVSVVLTEGLRLLGVQAPKEM 563



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 29  LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           LD++  V+E P+    G L+   A IL++ L   P  IA  +  ++  D  +D V   G 
Sbjct: 21  LDQVEDVLEVPKHEGQGDLAF-PAFILAKSLRQAPQKIASELAGKLS-DELIDHVEAVGP 78

Query: 87  GFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            +IN +L    +   +L+ I+     YG+  IG G  + I+  S N   PM +GH R  V
Sbjct: 79  -YINFFLKADKISAAVLADILDKESAYGQLAIGDGENICIDMSSPNIAKPMSMGHLRSTV 137

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           +G+ + +++    ++  R  ++ D G Q   L ++
Sbjct: 138 IGNAIGNIVEKVSFQPVRINHLGDWGTQFGKLIVA 172


>gi|255279909|ref|ZP_05344464.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255269682|gb|EET62887.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 588

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 130/608 (21%), Positives = 241/608 (39%), Gaps = 104/608 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V  RP  C       N AM+ ++     P+ IA+ +VA ++ D           GFINL 
Sbjct: 30  VSNRPDLC---EFQCNGAMVAAKKYKKAPIMIAKDVVAALQGDAMFAMAEAVNPGFINLK 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNL----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           LS  +L   L+ +     +   NL      K  K+ +++  AN   P+HVGH R A++G+
Sbjct: 87  LSGEFLAGFLNDM-----QADENLSVEKTAKPRKIILDYGGANVAKPLHVGHLRSAIIGE 141

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY---YPGVY 205
           ++  +  F G+EV  + ++ D G Q+  +   +  R  + +Y       EGY   YP   
Sbjct: 142 SIKRMGRFMGHEVIGDVHLGDWGLQMGLIITELRRRQPELVY-----FQEGYTGEYPQEA 196

Query: 206 LKHVG--KEL---ADKYSSELLNFPEEKWLPIVKDYSV---------QAMMKIIRDDLKA 251
              +G  +E+   A K S E   +  E  L   K             Q +M++   DLK 
Sbjct: 197 PFTIGDLEEIYPAASKKSKEDEAYRGEA-LEATKQLQQGNPGYRALWQHIMRVSIADLKK 255

Query: 252 ----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               LN++ D++  E D     P    +++  +  +G+ +E                D+ 
Sbjct: 256 NYSRLNVEFDLWKGESDAQPYIP----EMVQRMKDEGFAHE----------------DQG 295

Query: 308 QLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
            L+       D  + P   +LKSDG+  Y   DLA    + +    D + Y+       +
Sbjct: 296 ALVVDVKEETDTKEIPPCIILKSDGASLYATTDLATIVERMKLYQPDEIFYLTDKRQEMH 355

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             ++   A      K    +       +  +DG P K   R G  + L +++ ++  +  
Sbjct: 356 FIQVFRTARKTGLVKEDTKLSFLGFGTMNGKDGKPFKT--RDGGVMRLENLIADIEEEMY 413

Query: 423 RFMM--------LWRKNSELLDFDFCK---VKEQSKENPVF--------------YVQYA 457
           R +M          R+ ++++     K   +  Q+ ++ VF              Y+ Y 
Sbjct: 414 RKIMDNHEIDPQEARETAKIVGLSAIKYGDLSNQASKDYVFDIDRFTSFEGNTGPYILYT 473

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R +SI  + +      +  +         +  + SE  L + L  +  V+ENA     
Sbjct: 474 IVRIKSILNKYQAAGGSTENGVML-------AAANESEKALCLELGRFNGVMENAFEETA 526

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+K+  Y+YDLA+ F+  +         + +   N       + L+     ++ + ++++
Sbjct: 527 PHKICSYIYDLANEFNRFYHE------TKILSEENEAQKASWIALLRLTRRVLETCIDVL 580

Query: 578 GVESPNEM 585
           G E+P  M
Sbjct: 581 GFEAPERM 588


>gi|297799374|ref|XP_002867571.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
 gi|297313407|gb|EFH43830.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 125/577 (21%), Positives = 223/577 (38%), Gaps = 120/577 (20%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + +V  +     V+S  +AG GFIN+ LS  ++ K + +++++G++     +   
Sbjct: 70  PPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLINGVDTWAPTLSVK 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSNVEVLRRNHVGDWGTQFGMLIEY 188

Query: 179 ------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
                             L VF++  +  ++ D D  E     V     G  +  K  ++
Sbjct: 189 LFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEDFKERAQQAVVRLQGGDPVYRKAWAK 248

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           + +    ++  + +   V+   K                   + F+  +P  I  +I+ L
Sbjct: 249 ICDISRTEFAKVYQRLRVELEEK------------------GESFY--NPY-IAKVIEEL 287

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA- 339
             +G V E                +  +++F   + G D+   ++KSDG + Y + DL  
Sbjct: 288 NSKGLVEES---------------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTA 329

Query: 340 -YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLY 392
            +++   E+  + +IYV       +       A          +   ++N +   LV L 
Sbjct: 330 LWYRLNEEKA-EWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLV-LG 387

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            DG   +   RA D + L  ++DE                             VG  +V+
Sbjct: 388 EDGK--RFRTRATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVK 445

Query: 424 FMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           +  L  KN+ L ++ F   +    K N   Y+ YA+AR  SI R++       D D   +
Sbjct: 446 YADL--KNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGK-----DIDELRK 498

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    D   L L  HL  +   +E A     P  L  YLY+L+  +   +S+    
Sbjct: 499 TGKLALDHADERALGL--HLLRFAETVEEACTNLLPSVLCEYLYNLSEHYTRFYSN---- 552

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                 Q N       RL L  A A ++    +++G+
Sbjct: 553 -----CQVNGSPEETSRLLLCEATAIVMRKCFHLLGI 584


>gi|329964264|ref|ZP_08301365.1| arginine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328525569|gb|EGF52612.1| arginine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 605

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 141/594 (23%), Positives = 252/594 (42%), Gaps = 123/594 (20%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK- 122
           I E ++A    +P V S F   KGF+NL ++ S   ++L+ I     +YG       +  
Sbjct: 63  IGEYLLAN---EPSV-SAFNVIKGFLNLTIASSAWIELLNGIHADK-QYGIVAATDNSPL 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IE+ S N   P+H+GH R  ++G+ LA+++A +G  V +   +ND G  I    L+  
Sbjct: 118 VMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNRVVKTNIVNDRGIHICKSMLA-- 175

Query: 183 WRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPEEKW 229
           W+     Y N  + PE          G Y   + KH     KEL  K+  E LN  E K 
Sbjct: 176 WQK----YGN-GETPETSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQREGLNEEEAKA 230

Query: 230 L-----PIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                 P++K+ + + ++K   +D  ++AL   +   ++   D+ +R     +    D +
Sbjct: 231 KAEAESPLMKE-AREMLVKWEANDPEVRALWKKMNDWVYAGFDETYR----MMGVTFDKI 285

Query: 281 ARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVD-RPLLKSDGSY 331
             +   Y EG     K K  +  +   K   +R       + + G+ +D + LL++DG+ 
Sbjct: 286 YYESNTYLEG-----KEKVMEGLE---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTS 337

Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHS--------------------------GYV 364
            Y   D+   K ++ +   D MIYV+G++ +                          G V
Sbjct: 338 VYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMV 397

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRD-----GMPIKMSKRAGDFITLRHVVDEVGS 419
           +  E    +        + L+ E++   ++     G    ++K   D     ++   VG 
Sbjct: 398 ELPEGKMKSREGTVVDADDLMAEMIETAKETSNELGKLDGLTKEEAD-----NIARIVGL 452

Query: 420 DSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++++ +L    RKN      E +DF+          N   ++QY YAR +S+ R+AK+ 
Sbjct: 453 GALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVLRKAKEA 503

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                  + P   IP   E    E  LI  +A++  V++ A     P  +A Y YDL   
Sbjct: 504 GI-----VIPAQ-IPANIELSEKEEGLIQMVADFAAVVKQAGEDYSPSVIANYTYDLVKE 557

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +           ++  N  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 558 YNQFYHD------FSILREENEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|15219682|ref|NP_176826.1| arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative
           [Arabidopsis thaliana]
 gi|12322268|gb|AAG51163.1|AC074025_13 arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|14030685|gb|AAK53017.1|AF375433_1 At1g66530/F28G11_14 [Arabidopsis thaliana]
 gi|20334712|gb|AAM16217.1| At1g66530/F28G11_14 [Arabidopsis thaliana]
 gi|332196400|gb|AEE34521.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 127/567 (22%), Positives = 227/567 (40%), Gaps = 100/567 (17%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + ++  +     V+S  IAG GF+N+ LS  ++ K + +++V GI+     +   
Sbjct: 70  PPAVGQALIQSLPTSEMVESCSIAGPGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188

Query: 181 VFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           +F ++   +        DL   Y        +  E  +K    ++    +   P+ +  +
Sbjct: 189 LFEKFPDTESVTETAIGDLQVFYRESKLKFDLNPEFKEKAQQAVVRL--QGGDPVYRQ-A 245

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
              + +I R++   +  +  I + E      +P  I ++I+ L+ +G V E       SK
Sbjct: 246 WAKICEISRNEFAKVYKRLRIELEEKGESFYNPY-IANVIEELSSKGLVEE-------SK 297

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA------------------ 339
                     +++F   + G  +   ++KSDG + Y + DL                   
Sbjct: 298 GA--------RVIF---IEGFKIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVT 346

Query: 340 ----------YFKCKYERGF---DNMIY----------VMGSDHSGYVKRLEAVAAAVSE 376
                     +FK   + G+   D+  Y          V+G D+    KR    AA V  
Sbjct: 347 DVGQQQHFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDN----KRFRTRAAEV-- 400

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGSDSVRFMMLWRKNS 432
                 V L +L+   +D     + +R  D       L  + + VG  ++++  L     
Sbjct: 401 ------VRLADLLDEAKDRSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTNRI 454

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++     +  V Y+ YA+AR  SI R++     D+D +L     I  +    
Sbjct: 455 TGYTFSFDQMLNDKGDTAV-YLLYAHARICSIIRKSGK---DID-ELKKTGKIALDH--- 506

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +E  L +HL ++   +E A     P  L  YLY L+  F   +S+          Q N 
Sbjct: 507 AAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSN---------CQVNG 557

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579
                 RL L  A A ++    +++G+
Sbjct: 558 SAEETSRLLLCEATAIVMRKCFHLLGI 584


>gi|257458399|ref|ZP_05623541.1| arginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444203|gb|EEV19304.1| arginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 587

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 144/611 (23%), Positives = 246/611 (40%), Gaps = 124/611 (20%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-- 87
           +RI +E P D   G L        ++ L   P  IA  ++ +++ DP      + GKG  
Sbjct: 30  ERIGMETPPDPNLGDLGF-PLFSFAKTLRSAPAKIAAELLPKLQADPS-----LKGKGEV 83

Query: 88  -----FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                +IN++L       +IL +I+     YG+     G K+ +EF S N   P+H+GH 
Sbjct: 84  KAVGPYINVFLPKGETAAQILDTIIDRNENYGKTTTLSGKKIMVEFSSPNTNKPLHLGHL 143

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD-LPEGY 200
           R   +G++L+ ++ FSG ++ +   IND G  I    L+    YQ  L+ N  D + EG 
Sbjct: 144 RNDAIGESLSRILQFSGADIYKTNIINDRGVHICKSMLA----YQ--LFGNGIDPVKEGI 197

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEE------KW-------LPIVKDYSVQAMMKIIRD 247
            P  ++  +  +   KYS +     E+      KW       + + K  +  A+   I+ 
Sbjct: 198 KPDKFVGDMYVQF-HKYSKDHPEAEEQAQEMLRKWEAGDPETIKLWKKMNGWALQG-IQQ 255

Query: 248 DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                 +  D +F   D F +G      +I++ L ++G  Y+               +D 
Sbjct: 256 TYNRTGVSFDKLFFESDVFRKGRA----EILEGL-KKGIFYK--------DEDGSIWIDL 302

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           K + F   +        LL+ DG+  Y   D+     ++ E  FD +IYV+G++   + K
Sbjct: 303 KSIGFEKKL--------LLRGDGTSVYITQDIGLAITRHAEWPFDKLIYVVGNEQIYHFK 354

Query: 366 RLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAG------DFIT------LRH 412
            L  +   +  E  + +  L   +V L       KM  R G      D IT      L+ 
Sbjct: 355 VLFYIMKQLGYEWYSGLYHLAYGMVNLPEG----KMKSREGTVVDADDLITELKNSALKE 410

Query: 413 VV-----DEVGS--------------------DSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +      D VG+                    D+++ M+     SE L F+         
Sbjct: 411 IASKGREDAVGNPEEVAEKVALGALHYFLLQVDTIKDMLF--NASESLSFN--------- 459

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYP 506
            N   Y+QY  AR  SI R+A     D +     +  + +    ++  E +L+  L E+P
Sbjct: 460 GNTGPYIQYMGARISSILRKA-----DTEEGKKAKAGVCKPELLNSDIEWELLKKLEEFP 514

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             ++ A     P  +  YLYDL  +F   +    + P L    A N  +   RL L  AV
Sbjct: 515 AQVDKAAAQYAPMFITSYLYDLCKLFSRFY---HDCPIL---GAENADVAATRLALAKAV 568

Query: 567 ASIINSGLNII 577
             ++ +   ++
Sbjct: 569 YIVLKNATGLV 579


>gi|160879680|ref|YP_001558648.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160428346|gb|ABX41909.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 624

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 136/598 (22%), Positives = 247/598 (41%), Gaps = 101/598 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI---AGKGFI 89
           ++E P +  +G  S       ++   + P  IAE+I  +IK+  D + +        GF+
Sbjct: 83  LLEVPSNQIYGDYSL-PCFYFTKIFKMAPKLIAEVIKEKIKM-MDTEGILKNLEVVNGFL 140

Query: 90  NLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           NLYL+  ++++K+L        ++G    G    V I++ S N     HVGH R  ++G+
Sbjct: 141 NLYLNKENHIKKLLFE--GRKEDFGCGKAGLAQTVCIDYSSPNIAKNFHVGHLRTTLIGN 198

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYL 206
           +L  +    GY+V R  ++ D G Q   L ++   W  ++A+      +L   Y      
Sbjct: 199 SLYHIYKKLGYQVIRINHLGDWGTQFGKLIVAYQKWSNKEAVEEKGIEELLRIYIKFSKE 258

Query: 207 KHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISED 263
                EL ++  S  +     E++ L I K +   +M++  R  DL  L +  D +  E 
Sbjct: 259 SEQNLELEEEARSWFVKMEQGEKEALTIWKWFKEISMIEFERIYDL--LGVSFDYYTGES 316

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +    P  +R++++                +S+  +  D+++              D P
Sbjct: 317 FYMDKVPDLVRELMEKHLL-----------SESEGAKIVDLNQ-------------FDMP 352

Query: 324 ---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
              ++K DGS  Y + DLA   Y K +Y+  FD  IYV G +   + +++  V   +  +
Sbjct: 353 PCMIIKKDGSSIYHSRDLAAVLYRKKQYQ--FDKCIYVTGQEQKLHFEQVFKVIELMGYE 410

Query: 378 KAQINVLLCE--LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +Q N++     LVRL      +K+S R G+ +    ++ E                   
Sbjct: 411 WSQ-NLIHVPYGLVRL----QGVKLSSRTGNIVYAEDILTEAIKRALELIHQKNPNLDQP 465

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA- 468
                 +G  ++ F  L+ +  + +DF +  V   +    P  YVQY YAR +SI ++A 
Sbjct: 466 KEVARKIGIGAIIFHDLFHQRMKDVDFSWEDVLSFEGTTGP--YVQYTYARAKSILKKAE 523

Query: 469 -KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            K    ++D  L            D +   L+  ++EY   I  A    EP  +A Y   
Sbjct: 524 NKPKIDEVDVSLLS----------DVTTYSLLKIISEYKESIYEAANRFEPSVIARYTIL 573

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L++ F+  +           +   +  L   RL +V     I    + ++G+E P EM
Sbjct: 574 LSTAFNKFYHECN-------ILNADENLRDARLIVVDLTQEITKDAMGLLGIECPEEM 624


>gi|15613397|ref|NP_241700.1| arginine-tRNA ligase [Bacillus halodurans C-125]
 gi|38372617|sp|Q9KEL8|SYR2_BACHD RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|10173449|dbj|BAB04553.1| arginine-tRNA ligase [Bacillus halodurans C-125]
          Length = 561

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 224/545 (41%), Gaps = 98/545 (17%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           A  G++N +     +   L   + S  +Y +   G G +V I+  S N   P  +GH R 
Sbjct: 72  ATGGYVNFFFHRETVAGQLFQEMKSN-QYWQPNSGDGKRVVIDMSSPNIAKPFGIGHLRS 130

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGY 200
            ++G  L  L+  +GY+  R  ++ D G Q      +    YQ+  +  D DL   P   
Sbjct: 131 TIIGHALYHLLKKTGYDPIRVNHLGDWGTQFGKQIAA----YQR--WGGDVDLKQNPIAS 184

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHD 257
           +  +Y++    E A+K   E L     +W   +++   +A       +++ L   +  ++
Sbjct: 185 FLELYVRF--HEEAEK--DESLEDEGREWFKKLEEGDEEADRLWTYFVKESLNEFDRMYN 240

Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFR 312
               E D+  G+      +  ++  L  +G +   EG L  P                  
Sbjct: 241 RLGVEFDYVLGESFYNDQMAPVVKELQEKGLLTCSEGALVVPL----------------- 283

Query: 313 STMVGDDVDRP---LLKSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRL 367
                +D D P   ++KSDG+  Y   DLA   ++   ++G + ++YV+G + + + K++
Sbjct: 284 -----EDADLPPCLIVKSDGTSIYATRDLATAIYRHHVQKG-EKLLYVVGGEQTLHFKQV 337

Query: 368 EAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV--------- 417
             V   +  K A Q   +   L+RL  DG   KMS R G  + L  V+++V         
Sbjct: 338 FHVLKKMGYKWADQCEHITFGLLRL--DGK--KMSTRRGRVVMLEDVLNDVVAHAKAKIK 393

Query: 418 ----------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYAR 460
                           G  +V F  L  K    LD +F      S E     YVQY YAR
Sbjct: 394 EKHPNHPHLHEVAEAVGVGAVIFGDL--KQDRRLDVNFRLEDALSFEGETGPYVQYTYAR 451

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            +SI R+   +      D   ++V   E         L+  L +YP V+  AT A+EP++
Sbjct: 452 IQSILRKGDKLNDSRHMDW--QHVTKDEG------WSLLKVLIQYPNVLIKATEAREPHQ 503

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LA Y+  ++  F+  +           + A++  +   RL L      +I   + ++GV+
Sbjct: 504 LARYVLTVSKKFNQFYHK-------YVILADDETVRQARLILAERTGEVIADAMAVLGVK 556

Query: 581 SPNEM 585
           +P E+
Sbjct: 557 TPEEL 561


>gi|326916235|ref|XP_003204415.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 576

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 234/566 (41%), Gaps = 101/566 (17%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT-- 121
           A+ +  ++K D  V  +   G G +N  ++   L K +L  ++  G  YG       T  
Sbjct: 67  AQKLAEKLKCDAVVSEIS-TGPGTVNFTINRELLAKTVLQQVLKDGTRYGTKSELFSTVP 125

Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K  +EF S N     H+GH R  ++G+ +A+L    G+EVTR  Y+ D G Q   L +
Sbjct: 126 KQKAVVEFSSPNIAKKFHIGHLRSTIIGNFIANLKVALGHEVTRINYLGDWGMQFGLLGV 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL-------LNFPEEKWLPI 232
             F R+        S  P  +   VY++ + K  AD+ + +L       L   +E+ L +
Sbjct: 186 G-FQRFGDKEKLKSS--PLQHLFEVYVQ-INKAAADENTKKLAKDFFKKLEEHDEQALSL 241

Query: 233 VK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            K   D+S++   +I     K L +  D + S + F++     +  ++++        +G
Sbjct: 242 WKEFRDFSIKEYTRI----YKRLGVHFDEY-SGESFYQEKSQEVLKMLED--------KG 288

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348
           +L    +K T   D+  K+ L   + V        ++SDG+  Y   DLA    +  +  
Sbjct: 289 LLQKT-TKGTGVVDLSEKKDLSSLSTV--------IRSDGTSLYITRDLAAAIDRMNKYN 339

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D MIYV  +D       L   +A        + +L C+ V     G+   M  R G+ +
Sbjct: 340 WDTMIYVSIND-------LWKESAGFWHMVVPVYLLWCQHVSF---GLVQGMKTRKGEVV 389

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSEL-------------------------LDFDFCKVK 443
            L  V+DEV S  +  M   +   E+                          D+ F   +
Sbjct: 390 FLEDVLDEVRSRMLENMASAKTTKEVEDPVETAEKVGLAALIIQDFRGLLSSDYQFSWDR 449

Query: 444 E-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
             QS+ +   ++QY +AR  S+ R   +  P  D ++       QE +     + ++ HL
Sbjct: 450 ALQSRGDTGVFLQYTHARLHSLERMHGN-EPVTDVNV----ACLQEPD----AISILQHL 500

Query: 503 AEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             Y  V+  ++   +P  +  YL     LA+V H      R  P    V+ +   L   R
Sbjct: 501 LRYDEVLYRSSQDLQPKHIVSYLLTLSHLAAVAH------RTLP----VKGSTPALAQAR 550

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A  S++ +G+ ++G+    +M
Sbjct: 551 LCLFQATRSVLANGMKLLGITPVTQM 576


>gi|296271270|ref|YP_003653902.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296094057|gb|ADG90009.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 575

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 134/590 (22%), Positives = 241/590 (40%), Gaps = 108/590 (18%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
            N A+ L++ L   P  +A+ ++    +D    +  ++G GFIN+ LS  ++ +    + 
Sbjct: 43  ANIALSLAKRLRRAPRDVAQDLLG--ALDQTGITAEVSGPGFINITLSDEWIAEQAERL- 99

Query: 107 VSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              ++  R  + K T   V I++ + N    MHVGH R  +VGDTLA      G  V R+
Sbjct: 100 ---LQDERLGVPKVTPQTVVIDYSAPNAAKEMHVGHLRTTIVGDTLARTHEHLGNRVIRQ 156

Query: 165 YYINDAGAQINTL-----------AL--------SVFWRYQQALYNNDSDLPEGYYPGVY 205
            ++ D G     L           AL        + F++  +  ++ D +  E     V 
Sbjct: 157 NHLGDWGTPFGMLIEHLLDVGEEEALRRLAAGEGNAFYQEARKKFDTDPEFEERSRRRVP 216

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L   G   + +   E + + +  +        V AM+ +   D      +H   I+ +  
Sbjct: 217 LLQGGDPESLRLWGEFIEYTKRYF------NKVYAMLGVTLTD------EH---IAGESM 261

Query: 266 HRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDR 322
           +  +P  + D+ D L + G   + +G L          C       +F     G D    
Sbjct: 262 Y--NPM-LADVCDELEKAGIAKISDGAL----------C-------VFPPGFTGRDGAPL 301

Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA------ 373
           PL+  K DG Y Y   DLA  + +  +   D ++YV+G+  S + + + A A        
Sbjct: 302 PLIIRKRDGGYGYATTDLAAIRYRIRDLKADRILYVVGATQSLHFQMVFATARMAGWLTD 361

Query: 374 -VSEKKAQINVLLCELVRLYR--DGMPIKMSK-------RAGDFITLR--------HVVD 415
            +  +  QI  +L    +++R   G  +K++        RA   I  R         +  
Sbjct: 362 DIRAEHVQIGSVLGSDGKMFRTRSGESVKLTDLLNEAIVRADAVIADRGYEPEVREQIAR 421

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           +VG  +V++  L   +     FDF ++   +  N   Y+QYA AR RSIFR         
Sbjct: 422 KVGMGAVKYADLSVSHDSEYVFDFDRMLALTG-NTGPYLQYATARIRSIFRTGS------ 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              + P +V         +E  L + L ++  V++      EP++L  YL++LA  F   
Sbjct: 475 ---IDPGSVTGPIRLGHPTERALALQLLKFGSVVQAVADLSEPHRLCGYLFELAQAFTAF 531

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +         ++A + ++   RL L      I+  GL+++G++ P  M
Sbjct: 532 YEN------CPVLKAEDEEVRRSRLALSALTLRILLQGLDLLGIDVPERM 575


>gi|326334850|ref|ZP_08201051.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692887|gb|EGD34825.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 589

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 136/612 (22%), Positives = 250/612 (40%), Gaps = 99/612 (16%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D I I++ R    G   T     L + +  +P  I E + A +K    +    +  KGF
Sbjct: 22  IDNIEIQQTRKEFEGDF-TLVLFPLLKYIKANPQEIGEKLGAYLKERTPIVGYNVV-KGF 79

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +NL +  SY   I +SI+ S  +YG+  +      V +E+ S N   P+H+GH R  ++G
Sbjct: 80  LNLTIMDSYFLSIFNSIL-SQKDYGKIPVTADAPAVIVEYSSPNTNKPLHLGHIRNNLLG 138

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYYPGV 204
            ++A ++  +G  V +   IND G  I  + LA  +F   +         D   G Y  +
Sbjct: 139 FSMAKILEATGKRVYKTQIINDRGIHICKSMLAWQLFGNGETPQSTGIKGDKFVGKYYVL 198

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--------- 255
           + K   +++A+  S        E+  PI +  + Q + +  + D + L +          
Sbjct: 199 FDKAYKEQVAELVSQGKSKEEAERQAPIFQQ-AQQMLRRWEKGDAQILALWKQMNQWVYD 257

Query: 256 ------HDIFISED-DFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 H++ +S D +++  +   + +DI+      G  Y       K   +   D+  +
Sbjct: 258 GFEVTYHNLGVSFDRNYYESETYLLGKDIVQKGLESGVFYR------KEDGSVWIDLTEE 311

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYV 364
            L           ++ +L+SDG+  Y   DL     + E  F N   MIY +G++   + 
Sbjct: 312 GL----------DEKLVLRSDGTSVYITQDLGTATKRIEDDFPNITGMIYTVGNEQDYHF 361

Query: 365 KRLEAVAAAVSEKKAQ--------------------------INVLLCELVRLYRDGMPI 398
           K L  +   +    A+                           + L+ E+V + + G+  
Sbjct: 362 KVLFLILQKLGYSWAKNLYHLSYGMVELPNGKMKSREGTVVDADDLMQEMVSVAQ-GLSQ 420

Query: 399 KMSKRAG----DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFY 453
           ++ K  G        L H+   +G  ++++ +L     + + F+  + +  Q    P  +
Sbjct: 421 ELGKLEGYTEQQKQELYHI---IGLGALKYYILKVDPKKKIAFNPEESIDFQGNTGP--F 475

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY YAR RSI R  K I+           + P      + E QLI  L  +P VI+NA 
Sbjct: 476 IQYTYARIRSIMR--KGIY----------EISPVYIPLHSKEKQLIKLLMIFPEVIQNAA 523

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A Y+YDL   F+  + +      L  +   +     +R  L   V  +I +G
Sbjct: 524 TTYNPALIANYVYDLVKEFNSFYQN------LSILGEEDFLKRALRYHLSSKVGEVIATG 577

Query: 574 LNIIGVESPNEM 585
            +++G++ P  M
Sbjct: 578 FDLLGIQVPERM 589


>gi|195479011|ref|XP_002100732.1| GE16015 [Drosophila yakuba]
 gi|194188256|gb|EDX01840.1| GE16015 [Drosophila yakuba]
          Length = 664

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 248/593 (41%), Gaps = 93/593 (15%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ L   G+   P  IA  +       P ++ + IAG GF+N++LS  Y
Sbjct: 115 GDYQCNNAMGLSKKLKEKGISKAPRDIATELKGHCPPSPLIEKLEIAGAGFVNVFLSKDY 174

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               LS+++ +G+      + K  +V ++F S N    MHVGH R  ++G++L  L+ F 
Sbjct: 175 AASALSNLLRNGVSPPE--VNK-RRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 231

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215
            ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E   
Sbjct: 232 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 291

Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
           +  S +++   +K +P  +K + +  +  + R + + +  + DI I E    RG+    S
Sbjct: 292 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISIKE----RGESFYQS 343

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +++ L  +G +              + D  R+ +    T  G  +   ++KSDG +
Sbjct: 344 RMLSVVEYLRGKGLL--------------EADEGREIMWPDDTKTG--IPLTIVKSDGGF 387

Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-- 388
           TY  +D+A  + + E    D +IYV+ S  S +   +   A    E+ A +N L   +  
Sbjct: 388 TYDTSDMAAIRHRVEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLTHRVDH 443

Query: 389 ----VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWRKNSE 433
               V L  DG   K   R+GD + L  ++DE            G D V      +   E
Sbjct: 444 VQFGVVLGEDGKKFKT--RSGDTVKLADLLDEGMKRSLLQLESRGRDKVLTPQELKDAQE 501

Query: 434 LLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            L +      D C  +            + + N   Y+ Y Y R  SI R   + F +L 
Sbjct: 502 SLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNCGEDFSNLP 561

Query: 477 FDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             L   N V+  E E+  ++  L +H      ++   +     + L  + +++ +VF   
Sbjct: 562 EILKKTNIVLAHEKEWKLAKTLLKLH-----DILIKCSRELFLHFLCEFCFEVCTVFTEF 616

Query: 536 WSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +N +   +  N+      R+ L  A A+++     I+G++  ++M
Sbjct: 617 YDSCYCIEKNKQGDIIAVNHS-----RILLCEATAAVLRQCFYILGLKPVSKM 664


>gi|300771210|ref|ZP_07081086.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761880|gb|EFK58700.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 594

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 122/582 (20%), Positives = 238/582 (40%), Gaps = 112/582 (19%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + E + +RI   P++ S F   KGF+N+ LS +Y   +L+S +++  ++G      G K+
Sbjct: 65  VGEFLQSRI---PEL-SGFNVIKGFLNVSLSDNYWIDLLNSTLLAS-DFG-CFPANGKKL 118

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSV 181
            +E+ S N   P+H+GH R  ++G ++A ++   GY+V +   +ND G  I  + LA   
Sbjct: 119 MVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAYGYDVIKANLVNDRGIHICKSMLAWQK 178

Query: 182 FWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           F   +  A      D   G Y  ++ K   K++ +  +        +K  P++++   Q 
Sbjct: 179 FGNGETPASSGLKGDHLVGKYYVIFDKEYKKQIDELKAEGQTEEEAKKNAPLIRE--AQE 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M++                     +  GD   I+ +   +   G+VY G     K+    
Sbjct: 237 MLQ--------------------QWEAGDQQVIQ-LWSTM--NGWVYSGF---EKTYNQL 270

Query: 301 KCDMDRKQLLFRSTMVGDDV----------------------------DRPLLKSDGSYT 332
             D D+      + ++G D+                             + +L+ DG+  
Sbjct: 271 GVDFDKYYYESNTYLLGKDIIQEGLDSGVFFKKEDNSVWIDLTDEGLDQKLVLRGDGTSV 330

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ----------- 380
           Y   DL   + KY E   +  IYV+G++   + K L  +   + +  A            
Sbjct: 331 YITQDLGTAQLKYDEFHMNESIYVVGNEQDYHFKVLFLILKKLGKPWASGLFHLSYGMVD 390

Query: 381 ---------------INVLLCELVRLYRDGMPIKMSKRAGDFITLR-HVVDEVGSDSVRF 424
                           + L+ E+V   ++    ++ K  G   T +  + + +G  ++++
Sbjct: 391 LPSGKMKSREGTVVDADDLMSEMVETAKERTE-ELGKTDGFSETEKAELYNTIGMGALKY 449

Query: 425 MMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
            +L     + L FD  + V  Q    P  ++QY +AR +S+  +A               
Sbjct: 450 FLLKVDPKKRLLFDPNESVDFQGHTGP--FIQYTHARIKSVLNKA---------GFSEAT 498

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + + +   + E  LI  L  +P VIE +     P +LA Y+YD+A +++  +       
Sbjct: 499 PVTKPASISSYERDLIQVLGNFPVVIEASATEFSPAQLANYIYDVAKLYNKFYHEE---- 554

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++A   ++   RL L    A +I+ G+N++G++ P  M
Sbjct: 555 --SILKAEVEEVKNFRLHLSATAARVISKGMNLLGIQVPERM 594


>gi|195941727|ref|ZP_03087109.1| arginyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 585

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 219/540 (40%), Gaps = 92/540 (17%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253
              Y K+  + E A+K   +LL   E+K       W  + K ++++     I++  K  N
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYKITN 256

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308
              D I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ
Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
                        + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L
Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSL 358

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             VA  +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M  
Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQ 415

Query: 428 WRKNSE-----------------LLDFDFCK-VKEQSKENPVF------YVQYAYARCRS 463
             +N E                 LL  D  K +    KE+  F      Y+QY  AR  S
Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSDIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475

Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           I  + K     +   +DF L               E ++I  ++E    I NA     P 
Sbjct: 476 ILEKYKALSIPVMKKIDFKLLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  Y Y LA  F  ++        ++ +  NN  LT  R++ +  +   I + + ++ +
Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKTILQTIKNCMYLLNI 579


>gi|306820585|ref|ZP_07454216.1| arginine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551402|gb|EFM39362.1| arginine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 565

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 136/598 (22%), Positives = 250/598 (41%), Gaps = 89/598 (14%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           +K+I D  ++E P +   G  S      LS+ L   P  IAE +  +I+    +  + + 
Sbjct: 20  QKEIYD--ILEVPPNSEMGDFSF-PCFKLSKALRKAPQAIAEELCNKIEKPAFIRQIKVV 76

Query: 85  GKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
             G++N YL S + +++ L  ++    +Y +        + +++ S N   P H+GH R 
Sbjct: 77  S-GYLNFYLDSHTIIKQTLDKVLQEKTDYCKKK-PNNKNIIVDYSSPNIAKPFHIGHIRT 134

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP 202
            V+G  L +L  F GY V    ++ D G Q   L ++   W  ++ L       P     
Sbjct: 135 TVIGHALYNLYKFMGYNVIGINHLGDYGTQFGKLIVAYKKWGNEELLKQE----PIKTLL 190

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259
            +Y+K   +E  D  SS  L      W   ++D   +A  +    R++ LK  +  +D+ 
Sbjct: 191 ALYVKFHEEEEKD--SS--LTDEARMWFKNLEDGDEEAKKLWSFFREESLKEFSKVYDML 246

Query: 260 ISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + D + G+      +  +++ L  +  +         S+ T   D++   L   + +V
Sbjct: 247 GIKFDSYNGESFYSDKMPAVLEELKEKNLL-------QSSQGTTIVDLEEYGL--GAALV 297

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                    K+DGS  Y   DLA  K + E   F   +YV+ S    + K+++ V   + 
Sbjct: 298 Q--------KNDGSTLYLTRDLAAAKYRKETYNFYKTLYVVASQQMLHFKQMKQVLKLMG 349

Query: 376 EKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------ 415
              A   I+V+   +V L  +G    +S R G+ + L  V++                  
Sbjct: 350 YDWADDCIHVMFG-MVSL-EEGT---LSTRKGNVVFLEDVLNNAINKTRAIIEEKNPNLP 404

Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQ 467
                  ++G  +V F  L   NS + D+ F   K  S +     YVQY YAR  S+ R+
Sbjct: 405 DIEELSRQIGVGAVIFQEL--ANSRIKDYVFSMEKTLSFDGETGPYVQYTYARACSVIRK 462

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           +       DF       + +  E     + +I  ++ +  V+  +    EP+ +A Y+ D
Sbjct: 463 SN----GFDFSTANYESLAENEE----AMNIIKIISTFDEVLIKSENKNEPHHIARYVLD 514

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L+  F+  +     NP    +  +  ++   RL L  AV   I + ++I G+++P +M
Sbjct: 515 LSQAFNKFY---HSNP----INVDEVEIKKDRLALTLAVTYAIETAMSIFGIQTPKQM 565


>gi|168211451|ref|ZP_02637076.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170710582|gb|EDT22764.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 565

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 126/546 (23%), Positives = 224/546 (41%), Gaps = 105/546 (19%)

Query: 88  FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++      K I+S ++  G +YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKVVFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G +L  ++ F GY   R  ++ D G Q   L +S +  W  ++AL     + P      +
Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256
           Y+         K+  E  N PE   E  +   K    D    A+ +  +D  LK  N  +
Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDAEAVALWERFKDLSLKEFNKIY 242

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314
           D+   + D   G+ S   D +D +  +                    +++  +L  S   
Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281

Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364
             ++ D+ + P   ++KSDG+  Y   DLA    +++   FD  IYV+G D     +   
Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341

Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           K LE                        +S +K  + VLL +L+    D     + ++  
Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                  V  ++G  ++ F  L       + FD+ ++     E    YVQY+YAR +SI 
Sbjct: 401 QLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKSIL 459

Query: 466 RQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQEPY 519
           R+A  ++I  + DF       +  + EF+         LA+    ++ A I      EP 
Sbjct: 460 RKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLEPS 505

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I + L +IG+
Sbjct: 506 VVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLIGI 559

Query: 580 ESPNEM 585
           +   +M
Sbjct: 560 DVVEKM 565


>gi|301166548|emb|CBW26124.1| arginyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 585

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 120/583 (20%), Positives = 239/583 (40%), Gaps = 103/583 (17%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++     P  IAE +   I+    +      G  ++N +++P+     L++ V+SG  +
Sbjct: 56  LAKATKSAPNLIAETLAKSIQSQGIIQEAKNVGP-YLNFFINPAQTGSELTNEVLSGEFF 114

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            + L+ +  K  IE+   N    +HVGH R   +G+ L  +  ++  EV    Y  D+G 
Sbjct: 115 TKELVSERPKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKKYADQEVVAVTYPGDSGT 174

Query: 173 QINTLALSVFWRYQQALYNNDSDLPE---GYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            +        W  +   Y+N   +PE   G + G         L D+  +E      E+ 
Sbjct: 175 HV----AKCLWYLK---YHNKESIPETDKGPWLGSIYTKANLLLEDELGTEKEAKNREQL 227

Query: 230 LPIVKDYSVQA-------------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             I+K+   ++              ++++++  K  +++ D +  E +      SP  ++
Sbjct: 228 TAILKELENESGEYFDLWKETRGWSLEMMKEAYKWADVEFDRWFFESEV----DSPSLEL 283

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  +G +        K       +++  +L F            L+KSDG+  Y   
Sbjct: 284 AKKLYEEGKLV-------KDDGAIGMNLEEDKLGF----------CILIKSDGTGLYATK 326

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRD 394
           D+A    K+E  G +N IY++ +  + + K++  V   +  E+    + L    V L  D
Sbjct: 327 DVALAVKKFEEFGVENNIYIVDTRQAFHFKQVFKVLEHIGFEQAKNCHHLQYNFVEL-PD 385

Query: 395 GMPIKMSKRAGDFITLR--------HVVDE--------------------VGSDSVRFMM 426
           G    MS R G+ + L+        H+ +E                    +   ++ + M
Sbjct: 386 GA---MSSRKGNIVPLKDLINQMESHIANEYLSKYQDEWDKEEIAKTSSIIARGAINYGM 442

Query: 427 LWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQ---AKDIFPDLDFDLFPR 482
               N+  + FD  + +K   +  P  Y+QY YAR  S+  +   + D+  + DF    +
Sbjct: 443 TRFDNNRKIVFDMKEWLKLDGETGP--YLQYVYARINSLCTKLGYSSDL--EADFSKLEK 498

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +          SEL L++ ++ +  ++           L  YL++L  +++  ++   E 
Sbjct: 499 D----------SELALLIKISAFNDIVIQCHEKNSATALCSYLFELGKLYNTFYA---EC 545

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P     +A    L   RL+L  +V+ ++  GL+++G+E+P  M
Sbjct: 546 P---IAKAETETLKNARLKLSKSVSLVMKQGLSLLGIEAPERM 585


>gi|78185701|ref|YP_378135.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|109895047|sp|Q3AVY5|SYR_SYNS9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78169995|gb|ABB27092.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 590

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 144/602 (23%), Positives = 232/602 (38%), Gaps = 110/602 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV ++  D   +++     IAG GFINL + P  L
Sbjct: 40  GDFQANGALPLAKPLKQPPRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERL 99

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L++ + +    G  ++     V ++F S N    MHVGH R  ++GD+LA ++ F G
Sbjct: 100 AEELAARLGTD-RLGVPVVEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 158

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + V R  ++ D G Q   L                           +LK V  E  D   
Sbjct: 159 HSVLRLNHVGDWGTQFGMLI-------------------------THLKQVAPETLDTAD 193

Query: 219 S----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE----DDFHRGDP 270
           +    +L+ F  E       D   QA     RD++  L     + +       D  R + 
Sbjct: 194 AVDLGDLVAFYREAKKRFDDDDDFQATS---RDEVVKLQGGDPVSLKAWGLLCDQSRREF 250

Query: 271 SPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL- 324
             + D +D  L  +G  +     P      +  D+    D  Q +F   + G D + PL 
Sbjct: 251 QKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLVTDDGAQCVFLEGVTGKDGN-PLP 309

Query: 325 ---LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAV 374
               K DG + Y   DLA  + ++           +IYV  +  + +   +  VA  A  
Sbjct: 310 VIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIYVTDAGQANHFAGVFQVAERAGW 369

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
               A++  +   LV+   DG   K+  RAGD + LR ++DE                  
Sbjct: 370 IPDGARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERSEQDLRSRLQEEER 426

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        VG  +V++  L +       F F ++    + N   Y+ YA  R   
Sbjct: 427 TESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRMLAL-QGNTAPYLLYAVVRIAG 485

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+          DL   N   Q SE    E  L+  L ++ RVI        P +L  
Sbjct: 486 IARKGG--------DLGVSNAALQFSE--PQEWALVRELLKFDRVIVEVEDELLPNRLCS 535

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L+ VF+  +        +  ++A    L+  RL L    A  +  GL ++G+ +  
Sbjct: 536 YLFELSQVFNRFYDQ------VPVLKAEPEALS-SRLALCRHTADTLRCGLALLGIPTLE 588

Query: 584 EM 585
            M
Sbjct: 589 RM 590


>gi|2632106|emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 123/560 (21%), Positives = 222/560 (39%), Gaps = 86/560 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + +V  +     V+S  +AG GFIN+ LS  ++ K + ++++ G++     +   
Sbjct: 70  PPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTWAPTLSVK 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQFGMLIEY 188

Query: 181 VFWRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           +F ++       ++   DL   Y    +   + +   +K    ++        P+ +   
Sbjct: 189 LFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGD--PVYRKAW 246

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + +  I R +   +  +  + + E      +P  I  +I+ L  +G V E         
Sbjct: 247 AK-ICDISRTEFAKVYQRLRVELEEKGESFYNPH-IAKVIEELNSKGLVEES-------- 296

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYV 355
                  +  +++F   + G D+   ++KSDG + Y + DL   +++   E+  + +IYV
Sbjct: 297 -------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNEEKA-EWIIYV 345

Query: 356 MGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                  +       A          +   ++N +   LV L  DG   +   RA D + 
Sbjct: 346 TDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLV-LGEDGK--RFRTRATDVVR 402

Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                             VG  +V++  L  KN+ L ++ F 
Sbjct: 403 LVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADL--KNNRLTNYTFS 460

Query: 441 KVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +    K N   Y+ YA+AR  SI R++       D D   +         D   L L 
Sbjct: 461 FDQMLNDKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHADERALGL- 514

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            HL  +   +E A     P  L  YLY+L+  F   +S+          Q N       R
Sbjct: 515 -HLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSN---------CQVNGSPEETSR 564

Query: 560 LQLVHAVASIINSGLNIIGV 579
           L L  A A ++    +++G+
Sbjct: 565 LLLCEATAIVMRKCFHLLGI 584


>gi|15236164|ref|NP_194360.1| emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA
           ligase/ arginine-tRNA ligase/ nucleotide binding
           [Arabidopsis thaliana]
 gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|4539426|emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332659782|gb|AEE85182.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 123/560 (21%), Positives = 223/560 (39%), Gaps = 86/560 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + +V  +     V+S  +AG GFIN+ LS  ++ K + ++++ G++     +   
Sbjct: 122 PPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTWAPTLSVK 181

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 182 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQFGMLIEY 240

Query: 181 VFWRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           +F ++       ++   DL   Y    +   + +   +K    ++        P+ +   
Sbjct: 241 LFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGD--PVYRKAW 298

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + +  I R +   +  +  + + E      +P  I  +I+ L  +G V E         
Sbjct: 299 AK-ICDISRTEFAKVYQRLRVELEEKGESFYNPH-IAKVIEELNSKGLVEES-------- 348

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYV 355
                  +  +++F   + G D+   ++KSDG + Y + DL   +++   E+  + +IYV
Sbjct: 349 -------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNEEKA-EWIIYV 397

Query: 356 MGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                  +       A          +   ++N +   LV L  DG   +   RA D + 
Sbjct: 398 TDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLV-LGEDGK--RFRTRATDVVR 454

Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                             VG  +V++  L  KN+ L ++ F 
Sbjct: 455 LVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADL--KNNRLTNYTFS 512

Query: 441 KVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +    K N   Y+ YA+AR  SI R++       D D   +         D  E  L 
Sbjct: 513 FDQMLNDKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHAD--ERALG 565

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           +HL  +   +E A     P  L  YLY+L+  F   +S+          Q N       R
Sbjct: 566 LHLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSN---------CQVNGSPEETSR 616

Query: 560 LQLVHAVASIINSGLNIIGV 579
           L L  A A ++    +++G+
Sbjct: 617 LLLCEATAIVMRKCFHLLGI 636


>gi|167752086|ref|ZP_02424213.1| hypothetical protein ALIPUT_00328 [Alistipes putredinis DSM 17216]
 gi|167660327|gb|EDS04457.1| hypothetical protein ALIPUT_00328 [Alistipes putredinis DSM 17216]
          Length = 593

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 135/588 (22%), Positives = 237/588 (40%), Gaps = 121/588 (20%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I E +VA     P++ + F   KGF+NL L  ++       +  +   +G+     G  V
Sbjct: 61  IGEYLVANT---PEIKA-FNVIKGFLNLSLDSAFWAARFREVAANDT-FGQ-AAPTGRTV 114

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IE+ S N   P+H+GH R  ++G ++A ++  +G +V +   +ND G  I    L+  W
Sbjct: 115 MIEYSSPNTNKPLHLGHIRNNLLGYSVAQILKANGNKVIKVNLVNDRGIHICKSMLA--W 172

Query: 184 R-YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           + Y        S +   +  G Y     KH   ++ +  ++       +K  PI++    
Sbjct: 173 KLYGGGETPASSGMKGDHLVGKYYVEFDKHYKAQIKELVAAGQSEEEAKKNAPIMR---- 228

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           QA   + R + K                  DP  I  + + +   G+VYEG     K+  
Sbjct: 229 QAQEWLRRWEAK------------------DPE-IYSLWETM--NGWVYEGFDVTYKA-- 265

Query: 299 TQKCDMDR--------------------KQLLFRST-------MVGDDVDRPLL-KSDGS 330
               D D+                    + + FR         +  D +D+ LL + DG+
Sbjct: 266 -LGVDFDKVYYESQTYLLGKSLVEEGLARGIFFRKEDGSVWIDLTADGLDQKLLLRGDGT 324

Query: 331 YTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLLCE 387
             Y   DL   F+   E   D MIYV+G++ + + + L+ +   +   E    I  L   
Sbjct: 325 SVYMTQDLGTAFRRFEENRLDEMIYVVGNEQNYHFQVLKLILKKLGYDEWSDHIYHLSYG 384

Query: 388 LVRL------YRDGMPIKMSKRAGDFI-TLRHVVDEVG---------SDSVRFMMLWRKN 431
           +V L       R+G  +       D + T R + DE+G         +D++  M+     
Sbjct: 385 MVELPEGKMKSREGTVVDADDLIADMVSTAREMSDELGKLDGCTAQEADAIASMV----- 439

Query: 432 SELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDF 477
             L    +  +K   K+  +F              ++QY +AR RSI R+A++   D   
Sbjct: 440 -GLGALKYFILKVDPKKTMLFDPRESIDFNGNTGPFIQYTHARIRSILRKAEEAGIDFRT 498

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                 ++P+E       ++LI  L EYP  ++ A     P  +  Y Y+LA  F+G++ 
Sbjct: 499 QDEAAALLPEE-------IELIKALTEYPATVQAAAANFAPSIVGAYAYELAKSFNGYY- 550

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++  L+      R    MRL+L   VA  I   + ++G++ P  M
Sbjct: 551 --HDHSILKEECTTTRD---MRLRLAEQVARTIRLAMALLGIDVPERM 593


>gi|323486738|ref|ZP_08092058.1| hypothetical protein HMPREF9474_03809 [Clostridium symbiosum
           WAL-14163]
 gi|323399957|gb|EGA92335.1| hypothetical protein HMPREF9474_03809 [Clostridium symbiosum
           WAL-14163]
          Length = 593

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 126/576 (21%), Positives = 230/576 (39%), Gaps = 88/576 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA  +V ++K       +     GFIN+ L+P YL   ++ +  S  +YG       
Sbjct: 55  PIDIANELVEQLKDSSMFSEINAVMPGFINIRLNPEYLAGYVNRMA-SDEKYGLEEAKDP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++  AN   P+HVGH R AV+G+++  +  + G++   + ++ D G Q+  +   
Sbjct: 114 ETIIVDYGGANVAKPLHVGHLRAAVIGESIKRICRYMGHKTIGDVHLGDWGLQMGLIIEE 173

Query: 181 VFWRYQQALYNNDS-------DLP------EGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           +  R  + +Y +++       + P      E  YP    K   K  A +   E       
Sbjct: 174 LHDRQPELVYFDETFQGEYPEEAPFTISELEEIYPTASAKAKEKTEAGEAFKERAQEATF 233

Query: 228 KWLPIVKDYSV--QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           K     K Y      +M +   DLK     L +  D++  E D     P  I D+I+   
Sbjct: 234 KLQNGYKPYRAIWNHIMNVSLADLKKNYDNLKVYFDLWKGESDAQPYIPGLINDLIE--- 290

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
            +G  YE                    L+      GD  + P   + KSDG+  Y  +DL
Sbjct: 291 -KGLAYES----------------EGALVVDVAQEGDAKEYPPCIVRKSDGASLYATSDL 333

Query: 339 AY-FKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           A   + + E   D  IYV+      H   V R+   A  V E    I +    +    ++
Sbjct: 334 ATIIEREKEYQPDRYIYVVDKRQELHFVQVFRVAKKAGIVKEDTQMIFLGFGTMNS--KE 391

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVK 443
           G P K   R G  + L  ++ ++  +  + +   +K  E           L    +  + 
Sbjct: 392 GGPFKT--RDGGVMRLEQLIRDINGEVYKKIQEKQKVPENEMERTAEIIGLAALKYGDLS 449

Query: 444 EQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
            Q+ ++ VF              ++QY   R +SI  + +++      D   + + P +S
Sbjct: 450 NQATKDYVFDVERFISFEGNTGPHIQYMIVRIKSILEKYEELKGK---DAERQPIRPAQS 506

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               SE +L + L  +  +IE A     P+K+  Y+ DLA  F+  +    EN   + + 
Sbjct: 507 ---VSEKELQLELCRFGEIIETAFAETAPHKICQYMADLADAFNNFY---LEN---KIIA 557

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +       + L+     I+++ ++++G+ESP  M
Sbjct: 558 EEDACKQASFISLITLTKEILDTCMDLLGMESPEHM 593


>gi|33866849|ref|NP_898408.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932064|sp|Q7U3V8|SYR_SYNPX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33639450|emb|CAE08834.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 597

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 219/548 (39%), Gaps = 99/548 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV +++ D     +     IAG GFINL + P  L
Sbjct: 47  GDFQANGALPLAKPLKQAPRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERL 106

Query: 99  RKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +S+ +  G E  G   + +   V ++F S N    MHVGH R  ++GD+LA ++ F 
Sbjct: 107 AAEVSARL--GDERLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFR 164

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216
           G+ V R  ++ D G Q   L   +      AL   D+ DL               +L   
Sbjct: 165 GHTVLRLNHVGDWGTQFGMLITHLKQVAPDALETADAVDL--------------GDLVAF 210

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPI 273
           Y      F +++     +  S + ++K+   D   LKA  +  D   S  +F +     I
Sbjct: 211 YREAKKRFDDDEAF---QSTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----I 260

Query: 274 RDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL---- 324
            D +D  L  +G  +     P      +  ++    D  Q +F   + G D  +PL    
Sbjct: 261 YDRLDIRLNERGESFYNPFLPAVIDGLKAAELLVTDDGAQCVFLEGVQGKD-GKPLPVIV 319

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEK 377
            KSDG + Y   DLA  + ++    D      ++YV  +  + +   +  VA  A     
Sbjct: 320 QKSDGGFNYATTDLAAIRYRFGAAPDGDGARRVVYVTDAGQANHFAGVFQVAERAGWIPD 379

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            A++  +   LV+   DG   K+  RAGD + LR ++DE                     
Sbjct: 380 GARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSES 436

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  +V++  L +       F F ++    + N   Y+ YA  R   I R
Sbjct: 437 EEFIQNVAGTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGIAR 495

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           +  D+            V   + +F +  E  L+  L ++  VI        P +L  YL
Sbjct: 496 KGGDL-----------EVSTGQLQFSEPQEWALVRELLKFDSVIAEVEEELLPNRLCSYL 544

Query: 526 YDLASVFH 533
           ++L+ VF+
Sbjct: 545 FELSQVFN 552


>gi|312149088|gb|ADQ29159.1| arginyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 585

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 262 IYLESEIFKIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQKIENK 420

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E    I NA     P  L  Y
Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 531 SYSLAKHFSTYYQ------EVKIIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|323692123|ref|ZP_08106367.1| arginyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503810|gb|EGB19628.1| arginyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 593

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 127/576 (22%), Positives = 231/576 (40%), Gaps = 88/576 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA  +V ++K       +     GFIN+ L+P YL   ++ +  S  +YG       
Sbjct: 55  PIDIANELVEQLKDSSMFSEINAVMPGFINIRLNPEYLAGYVNRMA-SDEKYGLEEAKDP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++  AN   P+HVGH R AV+G+++  +  + G++   + ++ D G Q+  +   
Sbjct: 114 ETIIVDYGGANVAKPLHVGHLRAAVIGESIKRICRYMGHKTIGDVHLGDWGLQMGLIIEE 173

Query: 181 VFWRYQQALYNNDS-------DLP------EGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           +  R  + +Y +++       + P      E  YP    K   K  A +   E       
Sbjct: 174 LHDRQPELVYFDETFQGEYPEEAPFTISELEEIYPTASAKAKEKTEAGEAFKERAQEATF 233

Query: 228 KWLPIVKDYSV--QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           K     K Y      +M +   DLK     L +  D++  E D     P  I D+I+   
Sbjct: 234 KLQNGYKPYRAIWNHIMNVSLADLKKNYDNLKVYFDLWKGESDAQPYIPGLINDLIE--- 290

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
            +G  YE                    L+      GD  + P   + KSDG+  Y  +DL
Sbjct: 291 -KGLAYES----------------EGALVVDVAQEGDAKEYPPCIVRKSDGASLYATSDL 333

Query: 339 AY-FKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           A   + + E   D  IYV+      H   V R+   A  V E    I +    +    ++
Sbjct: 334 ATIIEREKEYQPDRYIYVVDKRQELHFVQVFRVAKKAGIVKEDTQMIFLGFGTMNS--KE 391

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVK 443
           G P K   R G  + L  ++ ++  +  + +   +K  E           L    +  + 
Sbjct: 392 GGPFKT--RDGGVMRLEQLIRDINGEVYKKIQEKQKVPENEMERTAEIIGLAALKYGDLS 449

Query: 444 EQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
            Q+ ++ VF              ++QY   R +SI  + +++    D +  P  + P +S
Sbjct: 450 NQATKDYVFDVERFISFEGNTGPHIQYMIVRIKSILEKYEEL-KGKDAEWQP--IRPAQS 506

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               SE +L + L  +  +IE A     P+K+  Y+ DLA  F+  +    EN   + + 
Sbjct: 507 ---VSEKELQLELCRFGEIIETAFAETAPHKICQYMADLADAFNNFY---LEN---KIIA 557

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +       + L+     I+++ ++++G+ESP  M
Sbjct: 558 EEDACKQASFISLITLTKEILDTCMDLLGMESPEHM 593


>gi|297738741|emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 127/550 (23%), Positives = 227/550 (41%), Gaps = 118/550 (21%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           GF+N+ LS S++ K +  +++ GIE +   L  K  +  ++F S N    MHVGH R  +
Sbjct: 197 GFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK--RAVVDFSSPNIAKEMHVGHLRSTI 254

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-----WRYQQALYNNDSDLPEGY 200
           +GDTLA ++ FS  +V R  ++ D G Q   L   +F     W +  A            
Sbjct: 255 IGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKFPNWEHASA------------ 302

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF- 259
                 + +G +L + Y +    F E+   P  K  + QA++++   +         I  
Sbjct: 303 ------QAIG-DLQEFYKASKKRFDED---PAFKGRAQQAVVRLQGGETSYRRAWAQICE 352

Query: 260 ISEDDFH------------RGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IS ++F+            +G+   +P I  +I+ L+ QG V E       S+  +   +
Sbjct: 353 ISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEE-------SQGARVIHI 405

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSG 362
           +           G ++   ++KSDG Y Y + D+A  +++   E+  + +IYV       
Sbjct: 406 E-----------GVNIPLIVVKSDGGYNYASTDMAALWYRLNEEKA-EWIIYVTDVGQQQ 453

Query: 363 YVKRLEAVAA----------------------AVSEKKAQINVLLCELVRLY-------- 392
           + + + + A                        + E   +      E+VRL         
Sbjct: 454 HFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKN 513

Query: 393 RDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449
           R    +    +A ++    L H  + VG  +V++  L  KN+ L ++ F   +    K N
Sbjct: 514 RSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKYADL--KNNRLTNYTFNFDQMLNDKGN 571

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YA+AR  SI R++     D+D +L    V+  + +    E  L +HL ++  V+
Sbjct: 572 TAVYLLYAHARICSIIRKSGK---DID-ELKKTGVLTLDHD---DERGLGLHLLQFSEVV 624

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A     P  L  YLY+L+  F   +S+          Q         RL L  A A +
Sbjct: 625 EEACTNLLPNVLCEYLYNLSENFTKFYSN---------CQVVGSAEETSRLLLCEATAVV 675

Query: 570 INSGLNIIGV 579
           +    +++G+
Sbjct: 676 MRKCFHLLGI 685


>gi|330807101|ref|YP_004351563.1| arginine--tRNA ligase (arginyl-tRNA synthetase), N-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375209|gb|AEA66559.1| Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), N-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 247

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE I+A +  D +V    IAG GFIN 
Sbjct: 30  IQVENTRDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPTDENVSKADIAGPGFINF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +   L   L +  ++    G    G   +  ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQNTQALASRLDA-ALADERIGVRKAGPLQRTVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174


>gi|315607135|ref|ZP_07882139.1| arginine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251189|gb|EFU31174.1| arginine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 605

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 130/578 (22%), Positives = 237/578 (41%), Gaps = 133/578 (23%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAV 145
           GF+NL ++P+   ++L+ I      +GR    + +  V IE+ S N   P+H+GH R  +
Sbjct: 82  GFLNLVIAPAAWVELLNDIHADD-RFGRKTATEDSSLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------- 198
           +G +LA +M  +G +V +   +ND G  I    L+  W     L   + + PE       
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--W-----LKWGNGETPESSGKKGD 193

Query: 199 ---GYYPGVYLKHVGKE--------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              G Y   + KH  +E        +AD    E      +   P++K+            
Sbjct: 194 HLIGDYYVAFDKHYREEVKALKAQYIADGLDEEKAEEKAKAEAPLIKE------------ 241

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----------- 296
                   H++ +    + +GDP  +R + + +    +VY G     K+           
Sbjct: 242 -------AHEMLVK---WEQGDPE-VRALWEKM--NNWVYAGFDETYKALGVGFDKIYYE 288

Query: 297 -----KTTQKCDMD-RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFK 342
                +  +K +    K L FR       + +  D +D+ LL ++DG+  Y   D+    
Sbjct: 289 SDTYLEGKKKVEEGLAKGLFFRKDDNSVWADLTEDGLDQKLLLRADGTSVYMTQDIGTAD 348

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRL------YRD 394
            +++    D MIYV+G++ + + + L  +   +  K  +  V     +V L       R+
Sbjct: 349 MRFKDFPIDKMIYVVGNEQNYHFQVLSLLLDRLGFKWGKELVHFSYGMVELPNGKMKSRE 408

Query: 395 GMPI--------------KMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN- 431
           G  +              + S   G F  +     R +   VG  ++++ +L    RKN 
Sbjct: 409 GTVVDADELIAAMIENARRTSDELGKFTDMTEDEKREIARIVGLGALKYFILKVDARKNM 468

Query: 432 ----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                E +DF+          N   ++QY YAR RSI R+A       D    P + +P+
Sbjct: 469 LFNPEESIDFN---------GNTGPFIQYTYARIRSIMRKAA-----ADGITIP-SALPE 513

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++  +  E+ LI  + ++   +  A +   P  +A Y Y+L   F+  +     +  +  
Sbjct: 514 DAPLNEKEINLIQKMNDFGAAVAQAGVDYSPSGIANYCYELVKEFNQFY----HDYSILN 569

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + ++ KLT  RL L   VA I+ S + ++G+E P  M
Sbjct: 570 AEHDDEKLT--RLVLAQNVAKIVKSAMALLGIEVPERM 605


>gi|167538705|ref|XP_001751014.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770493|gb|EDQ84184.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1019

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 135/590 (22%), Positives = 260/590 (44%), Gaps = 99/590 (16%)

Query: 47  TNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101
           +NAAM L+  L      + P  +A    A I  +  +    IAG GF+N+ ++ S+L  +
Sbjct: 131 SNAAMRLAAQLKAKGTKMPPREVAAAFTAAIPKNDIISGYEIAGPGFVNIDINTSFLEGV 190

Query: 102 LSSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            + ++  G+     L  + TK  V ++F S N    MHVGH R  ++G+++A ++ + G+
Sbjct: 191 TTKLLNKGV-----LPPEHTKQPVIVDFSSPNIAKEMHVGHLRSTIIGESIARMLEYIGH 245

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           +V R  ++ D G     L   +  ++   Q+   + SDL +G+Y     +          
Sbjct: 246 DVQRVNHVGDWGTPFGMLICHLRDKFPNFQSEPPSISDL-QGFYKAAKKR---------- 294

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIR 274
                 F EE   P  K    +A++K+   D   + A N+  D  +S  +F R     I 
Sbjct: 295 ------FDEE---PEFKPRVYEAVVKLQAHDPETILAWNLVCD--VSRREFQR-----IY 338

Query: 275 DIID-NLARQG-YVYEGILPP--PKSKTTQKCDMD----RKQLLFRSTMVGDDVDRPLLK 326
           D +D ++  +G   Y+ ++     + ++  K + D     +++ + S      V   ++K
Sbjct: 339 DRLDIDVKEKGESFYQDMMVEVVKQLESAGKLEEDDTAPGRKIAWSSVKKETKVPLIVVK 398

Query: 327 SDGS------YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEK 377
           SDG+      YTY  +DLA  + +  +    ++YV+ +  S + + + A+      VS K
Sbjct: 399 SDGARCGMTGYTYDTSDLAALRYRASQA-TWLVYVVDNGQSTHFQNVFALGRDMEWVSPK 457

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----VGSDSVRFMMLWRKNSE 433
               +V     V L  DG   K   R+GD + L+ ++DE     G+ +    M   + + 
Sbjct: 458 HRVDHVGFG--VVLGEDGKRFKT--RSGDTVRLKDLLDEGVERAGAAARTTEMTPEQRAR 513

Query: 434 LLD---------------------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++                     F + K+  Q K N   Y+ YA  R  SI R  +   
Sbjct: 514 MVEAIAYGCIKYADLSHNRTNDYVFSYDKML-QDKGNTAVYLLYANTRVHSILRNPEIAK 572

Query: 473 PDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            ++D D L P + +   +     E+++  +LA +P V+        P++L  Y+Y+L +V
Sbjct: 573 QNIDIDALAPSHTV---TLTHPKEIKIAKYLARFPEVLNRTIDTLMPHRLCDYIYELTNV 629

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           F   +   +E   ++     + K+ + RL L  +V  ++    +++G+ +
Sbjct: 630 FTEFY---QECYAVQKQSDGSVKVDVNRLMLYKSVGMVLEQAFHLLGIRA 676


>gi|152998130|ref|YP_001342965.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083538|sp|A6W2V1|SYR_MARMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150839054|gb|ABR73030.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 577

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 141/591 (23%), Positives = 228/591 (38%), Gaps = 98/591 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ L ++P   A+  + ++ +    + V IAG GFIN++L   +L K L
Sbjct: 37  GDYQANGIMGAAKALKMNPCDFAQATLDKLDLSDLAEKVEIAGPGFINIFLKNVWLSKEL 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + +  S      N +     V +++ S N    MHVGH R  V+GD +   + F G+ V 
Sbjct: 97  TQLRTSE-RLDVNPVDAPETVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFFGHHVV 155

Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203
           R+ ++ D G Q   L                    L  F+R  +  ++ D          
Sbjct: 156 RQNHVGDWGTQFGMLLAYMERLRSENATISMALSDLETFYRAAKTCFDEDEAFATRSREL 215

Query: 204 VYLKHVGKE----LADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKAL----- 252
           V     G E    L D++ +  L   EE +  +      Q +M      DDL  +     
Sbjct: 216 VVALQSGDEECLALWDEFINISLTHCEETYKMLGVSLERQHVMPESAYNDDLANVVNELK 275

Query: 253 --------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                   N    +F+ E     G+ +P   II      G++Y          TT    +
Sbjct: 276 EQGLLQESNGAQCVFMEEFANKEGEITP---IIVQKTGGGFLY---------ATTDLAAV 323

Query: 305 DRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY--VMGSD-- 359
             +Q    +  V   VD R  L     +T   +  A F  K E   ++M +  VMGSD  
Sbjct: 324 RFRQHTLNANRVLYFVDARQSLHFQQIFTL--SRKAGF-VKPETQLEHMPFGTVMGSDGK 380

Query: 360 ----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                SG V +L ++     E+  Q+                +       D   LR++  
Sbjct: 381 PFKTRSGGVAKLSSLLEEAQERAYQL----------------VASKNPEMDEEELRNIGR 424

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPD 474
            VG  SV++  L +  +   D+ F      S E N   Y+ YAY+R  SI +++      
Sbjct: 425 VVGIASVKYADLSKNRTS--DYVFNWDSMLSFEGNTAPYLLYAYSRVASIVKRS------ 476

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            + D+   N+  + S  +  E  L V L ++   I+       P+ L  YLYDLA  F  
Sbjct: 477 -EIDVV--NLTGEISIDEPQERALAVKLCQFEEAIQQVANDGMPHFLCAYLYDLAGTFMT 533

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      P L        ++   RLQL    AS +  GL+++G+E+   M
Sbjct: 534 FY---EACPILN----AEDEVKHSRLQLALNTASTLKLGLSLLGIETLERM 577


>gi|313206268|ref|YP_004045445.1| arginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445584|gb|ADQ81939.1| arginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023050|gb|EFT36063.1| arginyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336290|gb|ADZ12564.1| Arginyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 587

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 134/598 (22%), Positives = 240/598 (40%), Gaps = 136/598 (22%)

Query: 68  IVARIKIDPDV-----------DSVFIAG----KGFINLYLSPSYLRKILSSIVVSGIEY 112
           +V ++K  PD             S F+ G    KGF+NL +   Y    + S     + +
Sbjct: 46  LVKQLKKSPDALGQEIGEALINSSDFVEGFNVVKGFLNLKVKNKYF---IESFKAEELNF 102

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           G  +  K   V +E+ S N   P+H+GH R  ++G ++A ++  +GY+V +   +ND G 
Sbjct: 103 G-TVTPKHQTVMVEYSSPNTNKPLHLGHIRNILLGYSVAQILKEAGYDVIKTQIVNDRGI 161

Query: 173 QINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            I    L+  W ++       DS L      G Y     +E    Y  E+ N  E     
Sbjct: 162 HICKSMLA--WEKFGNGETPADSGLKGDKLVGNYYVKFDQE----YKKEIQNLVENG--- 212

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISED----DFHRGDPSPIRDIIDNLARQGYVY 287
                       +  D+ K    Q  IF+       D+ + +P  +R++   + +  +VY
Sbjct: 213 ------------LGEDEAKK---QALIFVEAQKMLLDWEQENPQ-VRELWQKMNQ--WVY 254

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST--MVGDDV------------------------- 320
           +G       +T ++  +D  Q+ + S   ++G D+                         
Sbjct: 255 DGF-----GETYKRLGVDFDQIQYESNTYILGKDLIQEGLSKGVLYQKEDGSVWCDLSDE 309

Query: 321 ---DRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV----KRLEAVAA 372
               + LL+SDG+  Y   DL     ++++     +IY +G++   +     K L+ +  
Sbjct: 310 GLDQKLLLRSDGTSVYMTQDLGTAVERFKQNDIQKLIYTVGNEQDYHFQVLFKILKKLGY 369

Query: 373 AVSEKKAQINVLLCELVR---LYRDG-----------MPIKMSKRAGDFITLRHVVDE-- 416
             +E    ++  + EL       R+G           M +   ++A +   L H+ +E  
Sbjct: 370 DWAEHLYHLSYGMVELPHGKMKSREGTVVDADDLMQEMYLTAKEKAQELGKLEHLPEEDK 429

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE---NPVFYVQYAYARCRSIFRQ 467
                 VG  ++++ ML     + + F+     E+S +   N   ++QY YAR +S+  +
Sbjct: 430 ERSYEIVGQGALKYYMLKVDPKKKMLFN----PEESIDFNGNTGPFIQYTYARIQSLLEK 485

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A     DL  D+          E +  E +LI HL  +  V+  A     P +LA Y+YD
Sbjct: 486 AGYEPQDLADDI----------EINAYEKELITHLGNFKTVVSKAAETLSPAQLANYIYD 535

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   ++  + +   NP L    A  + L   RL+L    A  I  GL ++G+   N M
Sbjct: 536 LVKSYNSFYQN---NPILNQEDAAVKNL---RLKLSALTAKTIKRGLELLGIGVVNRM 587


>gi|226320820|ref|ZP_03796373.1| arginyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233762|gb|EEH32490.1| arginyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 585

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQKIENK 420

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E    I NA     P  L  Y
Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|157117728|ref|XP_001658908.1| arginyl-tRNA synthetase [Aedes aegypti]
 gi|108884575|gb|EAT48800.1| arginyl-tRNA synthetase [Aedes aegypti]
          Length = 671

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 131/599 (21%), Positives = 252/599 (42%), Gaps = 124/599 (20%)

Query: 47  TNAAMILSRPLGLD----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
            NA  I+ +   LD    P  +A  ++  +   P +  V +AG GF+N++L  ++    +
Sbjct: 127 NNAMQIVQKLKALDVKTNPRDVANKLMEALPPSPAISKVEVAGAGFVNVFLDKAFGASAI 186

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            SI+  G++  +    +  +V ++F S N    MHVGH R  ++GD+++  + F G++V 
Sbjct: 187 MSILKDGVKPPQ---FEKRRVIVDFSSPNIAKEMHVGHLRSTIIGDSISRFLEFLGHDVL 243

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSE 220
           R  ++ D G Q   L   +  R+   L  +   SDL +G+Y         KE   ++ S+
Sbjct: 244 RLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPISDL-QGFY---------KESKSRFDSD 293

Query: 221 LLNFPEEKWLPIVK-----DYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP-- 270
             +F +  +  +VK     D S++A   +  + R + + +  + ++ + E    RG+   
Sbjct: 294 -EDFKKRAYACVVKLQSGDDDSMKAWKLICDVSRKEFQKVYDRLNVKLIE----RGESFY 348

Query: 271 -SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  I+  LA  G++ E              D  RK +++     G  +   ++KSDG
Sbjct: 349 QKRMEAIVKELANAGFLEE--------------DEGRK-IMWGENRNG--IPLTIIKSDG 391

Query: 330 SYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            +TY  +D+A  K + +E   + ++YV  +  + + + + + A        + NVL   +
Sbjct: 392 GFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFQTIFSCA-------RRANVLDPNV 444

Query: 389 VRLYRDGMPI-------KMSKRAGDFITLRHVVDE------------------------- 416
            R+   G  +       K   R+GD + L  ++DE                         
Sbjct: 445 HRVDHVGFGVVLGEDGKKFKTRSGDTVKLTELLDEGLKRSLDKLLEKERDKVLTPEELKQ 504

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               V    +++  L    +    F F K+ E  K N   Y+ YAY R RSI R     F
Sbjct: 505 AQESVAYGCIKYADLSHNRNNEYIFSFDKMLE-DKGNTAVYLLYAYTRIRSIARNCGGDF 563

Query: 473 PDLDFDLFPRNVIPQESEFDTSEL--------QLIVHLAEYPRVIENATIAQEPYKLAFY 524
            +        N+   E   DT+EL        +L   L ++  V++  +     + L  +
Sbjct: 564 AN--------NI---EKVIDTTELTLDHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEF 612

Query: 525 LYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +Y++++ F   +       +N +   V     K+   R+ L  A + I+    +I+G++
Sbjct: 613 VYEVSTTFTEFYDSCYCIEKNKQGEIV-----KINAGRVLLCEATSRILGKCFDILGLK 666


>gi|257894701|ref|ZP_05674354.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257831080|gb|EEV57687.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 470

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 123/526 (23%), Positives = 223/526 (42%), Gaps = 98/526 (18%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++  +M   GY+ 
Sbjct: 1   MQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQP 60

Query: 162 TREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
            R  ++ D G Q   L ++   W  ++A+       P      +Y++    E+A+  +  
Sbjct: 61  IRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF--HEVAE--TEP 112

Query: 221 LLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIR 274
            LN     W   +++   +A  + +  RD+ +K  N  +D+     D   G+      + 
Sbjct: 113 ELNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLNGEAFYNDKMD 172

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYT 332
           +I+  L  +  + E        K  +  D+    L             P L  KSDG+  
Sbjct: 173 EIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPALIKKSDGATL 213

Query: 333 YFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------------- 370
           Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV                   
Sbjct: 214 YITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWSDDMHHIPFGL 271

Query: 371 ----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
                  +S +K +I VLL E++         ++S++  D      V  +VG  +V F  
Sbjct: 272 ITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQVGVGAVIFHD 330

Query: 427 LWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A               
Sbjct: 331 L--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA--------------G 372

Query: 484 VIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            +P E+      D +  +++  + +YP  + +A    EP  +A +   LA  F+ +++H 
Sbjct: 373 FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLAQAFNKYYAHT 432

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + A++ +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 433 K-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 470


>gi|307168598|gb|EFN61656.1| Arginyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 642

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 205/487 (42%), Gaps = 89/487 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +++    +   G    N+AM L++ L      + P  IA  I+++++  P VD   IAG 
Sbjct: 116 VIVTTSNNPKFGDYQCNSAMPLAQQLSSSGNKVIPRNIANNIMSKLEESPLVDKYEIAGA 175

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNL--IGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           GFIN+YL   + + +LS+     ++ G  L    K  +V ++F S N    MHVGH R  
Sbjct: 176 GFINIYLKRDFGQLVLSN----WLKIGEVLPPYVKKKRVIVDFSSPNIAKEMHVGHLRST 231

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-----EG 199
           ++GD+++ L+ + G++V R  +I D G Q   L   +    Q    N  +  P     + 
Sbjct: 232 IIGDSISRLLEYLGHDVLRLNHIGDWGTQFGMLIAHL----QDKFPNYSTVTPAIQDLQA 287

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +Y    ++    E   K + E +   +     I K + +  +  + R + + L  + DI 
Sbjct: 288 FYKESKIRFDSDEEFKKRAYECVVKLQAFEPNITKGWKM--ICDVSRKEFEKLYTRLDIK 345

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           + E    RG+    + +           E I+   +SK   + D  RK +      VG  
Sbjct: 346 LIE----RGESFYQKRM-----------ELIVKELESKNLLEEDNGRKVMWGEKHGVG-- 388

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           +   ++KSDG +TY  +D+A  K + E    +      +  S + + LE+ A     KKA
Sbjct: 389 IPLIIVKSDGGFTYDTSDMAAIKQRIEEERADW---ANAGQSLHFQMLESCA-----KKA 440

Query: 380 QINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE---------------- 416
            I   L    R++  G  +       K   R+G+ + L  ++DE                
Sbjct: 441 GI---LKSFHRVHHVGFGVVLGEDKKKFKTRSGETVKLIELLDEGLKRTLQKLKEKERDK 497

Query: 417 --------VGSDSVRFM------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                      +SV +       +L  +N E + F F K+ E  K N   Y+ YA  R R
Sbjct: 498 VLSEEELKAAQESVAYGCIKYADLLHNRNHEYV-FSFDKMLE-DKGNTAVYILYALTRIR 555

Query: 463 SIFRQAK 469
           SI R AK
Sbjct: 556 SIARMAK 562


>gi|224023557|ref|ZP_03641923.1| hypothetical protein BACCOPRO_00260 [Bacteroides coprophilus DSM
           18228]
 gi|224016779|gb|EEF74791.1| hypothetical protein BACCOPRO_00260 [Bacteroides coprophilus DSM
           18228]
          Length = 605

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 132/571 (23%), Positives = 225/571 (39%), Gaps = 117/571 (20%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++     ++L+ I     E+G R        V IE+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTIASDVWVELLNRIHADA-EWGIRKADENAPLVMIEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------ 198
           ++G+ LA++MA +G +V +   +ND G  I    L+  W     L   + + PE      
Sbjct: 140 LLGNALANIMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSGKKG 192

Query: 199 ----GYYPGVYLKHVG---KELADKYSSELLNFPE-------------------EKWLPI 232
               G Y   + KH     KEL  K+ +E +N  E                    KW   
Sbjct: 193 DHLIGDYYVAFDKHYKAEVKELMAKFQAEGMNEEEAKAKAEAESPLMLEAREMLRKWE-- 250

Query: 233 VKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQ 283
             D  V+++ K++ D          K + +  D I+     +  G    +  +      +
Sbjct: 251 ANDPEVRSLWKMMNDWVYAGFDETYKMMGVSFDKIYYESQTYLEGKEKVMEGL-----EK 305

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
           G+ +       K   +   D+         T  G D  + LL++DG+  Y   D+   K 
Sbjct: 306 GFFFR------KEDGSVWADL---------TAEGLD-HKLLLRADGTSVYMTQDIGTAKL 349

Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           +++    + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM  
Sbjct: 350 RFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMKS 406

Query: 403 RAGDFI-----------TLRHVVDEVGS----------DSVRFMMLWRKNSELLDFDFCK 441
           R G  +           T +   +E+G           D  R + L      +L  D  K
Sbjct: 407 REGTVVDADDLMEAMIETAKETSNELGKLDGLTKEEADDIARIVGLGALKYFILKVDARK 466

Query: 442 -VKEQSKENPVF------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            +    KE+  F      ++QY YAR +SI R+A +        +    VIP   E  T 
Sbjct: 467 NMTFNPKESIDFNGNTGPFIQYTYARIQSILRKAAEA------GITVPAVIPAGIELSTK 520

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  LI  LA++  V++ A     P  LA Y YDL   ++  +           ++  N  
Sbjct: 521 EEGLIQMLADFGNVVKQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILREENEA 574

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L + RL L   V  ++   + ++G+E P  M
Sbjct: 575 LKVFRLALSQNVGKVVKLAMGLLGIEVPERM 605


>gi|50744720|ref|XP_419847.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 579

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 132/569 (23%), Positives = 235/569 (41%), Gaps = 104/569 (18%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT-- 121
           A+ +  ++K D  V  +   G G +N  ++   L K +L  ++  G +YG       T  
Sbjct: 67  AQKLAEKLKCDAVVSEIS-TGPGTVNFTINRELLAKTVLQQVLKDGTQYGTKSELFSTVP 125

Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K  +EF S N     H+GH R  ++G+ +A+L    G+EVTR  Y+ D G Q   L +
Sbjct: 126 KQKAVVEFSSPNIAKKFHIGHLRSTIIGNFIANLKVALGHEVTRINYLGDWGMQFGLLGV 185

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSEL-------LNFPEEKW 229
                +QQ  + +   L   P  +   VY++ + K  AD+ + +L       L   +E+ 
Sbjct: 186 G----FQQ--FGDKEKLKSSPLQHLFEVYVQ-INKAAADEKTKKLAKDFFRKLEEHDEQA 238

Query: 230 LPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           L + K   D+S++   +I     K L +  D + S + F++     +  ++++       
Sbjct: 239 LSLWKEFRDFSIKEYTRI----YKRLGVHFDEY-SGESFYQEKSWEVLKMLED------- 286

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            +G+L    +K T   D+  K+ L   + V        ++SDG+  Y   DLA    +  
Sbjct: 287 -KGLLQKT-TKGTGVVDLSEKKDLSSLSTV--------IRSDGTSLYITRDLAAAIDRMN 336

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +  +D MIYV   + S + + L  +   +     +     C+ V     G+   M  R G
Sbjct: 337 KYNWDTMIYVTDRNQSSHFQHLFQILKLMGYDWVE----RCQHVSF---GLVQGMKTRKG 389

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSEL-------------------------LDFDFC 440
           + I L  V+DEV S  +  M   +   E+                          D+ F 
Sbjct: 390 EVIFLEDVLDEVRSRMLENMASAKTTKEVEDPVETAEKVGLAALIIQDFRGLLSSDYQFS 449

Query: 441 KVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +  QS+ +   ++QY +AR  S+  Q     P  D ++       QE +     + ++
Sbjct: 450 WDRALQSRGDTGVFLQYTHARLHSL-EQMHGNEPVTDINV----ACLQEPD----AISVL 500

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLT 556
            HL  Y  V+  ++   +P  +  YL     LA+V H      R  P    V+ +   L 
Sbjct: 501 QHLLRYDEVLYRSSQDLQPKHIVSYLLTLSHLAAVAH------RTLP----VKGSTPALA 550

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L  A  S++ +G+ ++G+     M
Sbjct: 551 QARLCLFQATRSVLANGMKLLGITPVTRM 579


>gi|288926638|ref|ZP_06420553.1| tRNA ligase [Prevotella buccae D17]
 gi|288336607|gb|EFC74978.1| tRNA ligase [Prevotella buccae D17]
          Length = 605

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 130/578 (22%), Positives = 237/578 (41%), Gaps = 133/578 (23%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAV 145
           GF+NL ++P+   ++L+ I      +GR    + +  V IE+ S N   P+H+GH R  +
Sbjct: 82  GFLNLVIAPAAWVELLNDIHADD-RFGRKTATEDSPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------- 198
           +G +LA +M  +G +V +   +ND G  I    L+  W     L   + + PE       
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--W-----LKWGNGETPESSGKKGD 193

Query: 199 ---GYYPGVYLKHVGKE--------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              G Y   + KH  +E        +AD    E      +   P++K+            
Sbjct: 194 HLIGDYYVAFDKHYREEVKALKAQYIADGLDEEKAEEKAKAEAPLIKE------------ 241

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----------- 296
                   H++ +    + +GDP  +R + + +    +VY G     K+           
Sbjct: 242 -------AHEMLVK---WEQGDPE-VRALWEKM--NSWVYAGFDETYKALGVGFDKIYYE 288

Query: 297 -----KTTQKCDMD-RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFK 342
                +  +K +    K L FR       + +  D +D+ LL ++DG+  Y   D+    
Sbjct: 289 SDTYLEGKKKVEEGLAKGLFFRKDDNSVWADLTEDGLDQKLLLRADGTSVYMTQDIGTAD 348

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRL------YRD 394
            +++    D MIYV+G++ + + + L  +   +  K  +  V     +V L       R+
Sbjct: 349 MRFKDFPIDKMIYVVGNEQNYHFQVLSLLLDRLGFKWGKELVHFSYGMVELPNGKMKSRE 408

Query: 395 GMPI--------------KMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN- 431
           G  +              + S   G F  +     R +   VG  ++++ +L    RKN 
Sbjct: 409 GTVVDADELIAAMIENARRTSDELGKFTDMTEDEKREIARIVGLGALKYFILKVDARKNM 468

Query: 432 ----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                E +DF+          N   ++QY YAR RSI R+A       D    P + +P+
Sbjct: 469 LFNPEESIDFN---------GNTGPFIQYTYARIRSIMRKAA-----ADGITIP-SALPE 513

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++  +  E+ LI  + ++   +  A +   P  +A Y Y+L   F+  +     +  +  
Sbjct: 514 DAPLNEKEINLIQKMNDFGAAVAQAGVDYSPSGIANYCYELVKEFNQFY----HDYSILN 569

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + ++ KLT  RL L   VA I+ S + ++G+E P  M
Sbjct: 570 AERDDEKLT--RLVLAQNVAKIVKSAMALLGIEVPERM 605


>gi|281358702|ref|ZP_06245179.1| arginyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314828|gb|EFA98864.1| arginyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 596

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 135/603 (22%), Positives = 238/603 (39%), Gaps = 135/603 (22%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P+  A  +   +K  PDV+ V +  K F+N+ +    L +   + V   +E  +    +
Sbjct: 52  NPMQAAAAVAEFLKGHPDVEGVEVV-KAFVNVTVKAGALHRDSVAAVERLLEAAKLPEAQ 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ IEF + N   P H+GH R   +G +LASL+   G++V     +ND G  I   ++
Sbjct: 111 RKRILIEFSAPNTNKPQHLGHVRNNTLGMSLASLLKRVGHDVIEINLVNDRGIHICK-SM 169

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVY--------------LKHVGKELADKYSSELLNFP 225
             + R+        + +   +  G +              LK    ELADK S EL    
Sbjct: 170 IAYQRFGNGCTPESTGMKGDHLVGKFYVEYNKALSEEIKVLKAARPELADKDSEEL---- 225

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
              +L      + Q M++                    D+  GDP+ +R++   +   G+
Sbjct: 226 ---FLETELGRATQKMLQ--------------------DWEAGDPA-VRELWKMM--NGW 259

Query: 286 VYEGILPPPKSKTTQKCDM--DRKQLLFRSTMVGDDV----------------------- 320
           V+ G      ++T ++  +  D   L   + ++G D+                       
Sbjct: 260 VFAGF-----AQTYERMGIHFDHTYLESETYLLGKDIVAAGLEKGVFAKREDGAVFCDLG 314

Query: 321 ---DRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSE 376
               + +L+SDG+  Y   D+     K+E    ++M++V+G + + + + L  +   +  
Sbjct: 315 KLGKKVVLRSDGTSVYITQDIGTTLKKFEDYHPESMVWVVGDEQNLHFQMLFEIMKRLGY 374

Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
             A Q+  L   +V L       KM  R G  +    + DE                   
Sbjct: 375 PWADQLYHLSYGMVNLPTG----KMKSREGTVVDADDLFDEMAKLATDACKERGGEELDP 430

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFR 466
                    +G  +++FM+L       + FD    +K +    P  Y+QYA AR  SI R
Sbjct: 431 AELAERGEIIGLGALKFMLLKFNPKTTIMFDPAASLKFEGDTGP--YIQYAAARINSIER 488

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           +A +    +DF        P + ++      +E  L V    YP V++ A   ++   LA
Sbjct: 489 KAAE--RGIDFS-------PAKVDWALLAHPAEKALAVTAGFYPAVLKLAAERRDCSGLA 539

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL +LA  F+  +   RE P L    A   +L   RL +  AV +II  GL  + ++ P
Sbjct: 540 EYLLNLAKAFNRFY---RECPVL---AAETPELVAGRLAMADAVRTIIVDGLATLTIKVP 593

Query: 583 NEM 585
             M
Sbjct: 594 QAM 596


>gi|300727425|ref|ZP_07060834.1| arginine--tRNA ligase [Prevotella bryantii B14]
 gi|299775305|gb|EFI71904.1| arginine--tRNA ligase [Prevotella bryantii B14]
          Length = 605

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 126/578 (21%), Positives = 239/578 (41%), Gaps = 131/578 (22%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P+   ++L+ I  +  ++G   + + +  V IE+ S N   P+H+GH R  
Sbjct: 81  KGFLNLSIAPAAWVELLNEINANP-KFGEKPVTENSPLVMIEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY----QQALYNNDSDLPEG 199
           ++G +LA +M  +G +V +   +ND G  I    L+   W      ++A    D  + + 
Sbjct: 140 LLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLAWLKWGNNITPEKAGKKGDHLIGDF 199

Query: 200 Y--YPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKAL 252
           Y  +   Y + V KEL  +Y++E +   E     E+  P++K+                 
Sbjct: 200 YVAFDKHYREEV-KELVAQYTAEGMGEEEAKKKAEQEAPLIKE----------------- 241

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS---------------- 296
              HD+ +    +   DP  IR +   +    +VY G     K+                
Sbjct: 242 --AHDMLVK---WENNDPE-IRQLWAKM--NSWVYAGFDETYKALGVSFDKIYYESNTYL 293

Query: 297 KTTQKCDMD-RKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-E 346
           +  +K +    K L +R       + +  D +D + LL+SDG+  Y   D+     ++ +
Sbjct: 294 EGKKKVEEGLEKGLFYRRDDNSVWADLTKDGLDEKLLLRSDGTSVYMTQDIGTADMRFSD 353

Query: 347 RGFDNMIYVMGSDHSGYVKRL-----------------------EAVAAAVSEKKAQI-- 381
              D MIYV+G++ + + + L                       E     +  ++  +  
Sbjct: 354 FPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNGKMKSREGTVVD 413

Query: 382 -NVLLCELVRLYRDGMPIKMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN- 431
            + L+ E+V+  R+      S   G F  +       +   VG  ++++ +L    RKN 
Sbjct: 414 ADDLIAEMVKDARE-----TSDELGKFKDMTEEEKNEIARIVGMGALKYFILKVDARKNM 468

Query: 432 ----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                E +DF+          N   ++QY YAR RSI R AK+   ++   L        
Sbjct: 469 LFNPEESIDFN---------GNTGPFIQYTYARIRSIMRNAKEQNINIPASL------SD 513

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            +  +  E++LI  + ++   +  A     P  +A Y Y+L   F+  +           
Sbjct: 514 NAPLNEKEIELIQKMNDFSAAVAEAGTNYSPSGIANYCYELTKDFNQFYHD------YSI 567

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++A+  +  + RL +   VA II +G+ ++G++ P  M
Sbjct: 568 LKADTEEERVTRLVIAENVAKIIKNGMELLGIQVPERM 605


>gi|108762554|ref|YP_631488.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|21307601|gb|AAK59398.1| Arg-tRNA synthetase [Myxococcus xanthus]
 gi|108466434|gb|ABF91619.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 573

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 133/593 (22%), Positives = 241/593 (40%), Gaps = 95/593 (16%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL-YLS 94
           +P + AHG LS  A   L++     P  IA  +   + + P ++   +    ++N  + +
Sbjct: 33  KPAEPAHGDLSF-ATFPLAKAQKKAPPAIAAGLAQSLSV-PGLEIKAVGP--YVNARFPT 88

Query: 95  PSYLRKILSSIVVSGIEYGRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +  +++ +   +GI YG +   G+G  V I++ S N   P+   H R   +G  +A++
Sbjct: 89  LPFTAEVIDAARSAGIRYGGDEDAGRGKTVAIDYSSPNIAKPIGFHHIRTTFLGHCIANI 148

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+ V    Y+ D G Q   +A+  F  Y      +D     G+   VY+K      
Sbjct: 149 YRALGWRVEGINYLGDWGKQFGLVAVG-FQEYGDPARIDDM----GHLVEVYVK------ 197

Query: 214 ADKYSSELLNFPEE----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           A+K +     F E+                K     +D S++   KI       + I+ +
Sbjct: 198 ANKRAEAEPEFDEKARAFFRRMEAGDAEALKLWNQFRDTSIKGFKKI----YARMGIEFE 253

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               E  +       +  +ID +A++          P  K +Q        L+   T   
Sbjct: 254 HIEGESRYQ----GKMDAVIDQIAKK----------PGVKESQGA------LIVDLTYAE 293

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS--------------- 361
           ++    L K+DGS  Y   DLA  + +YER  FD  +YV+  D +               
Sbjct: 294 NEPPILLKKNDGSTLYATRDLAAAQDRYERFQFDKSLYVVAQDQALHFRQVFRALKEMDL 353

Query: 362 GYVKRLEAVA----AAVSEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFIT--LRHV 413
            +  R   VA      +S +K Q+ V L +++   R+ + +K+ +   AG   T     +
Sbjct: 354 PWADRTVHVAFGRIHGMSTRKGQV-VQLNDVLDEARERVSVKVRENVEAGRIQTDDADAL 412

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIF 472
            +++   ++ F  L  K +    FD+ +V   +    P  Y+QYA+AR  ++ R+     
Sbjct: 413 SEQIALGAIAFGDLKHKRASDYTFDWDEVLSFEGHTGP--YLQYAHARAVNVLRKGGGAP 470

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D  L     +P+E         L+  +   P V+ +A    EP  +A  L D+AS  
Sbjct: 471 ASYDAALL---TLPEEQ-------ALLREIMRLPEVVRDAAEQYEPSLVARLLLDVASAL 520

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +++ G +    R     N  L   RL L+ A    + +GL ++G+ +P+ M
Sbjct: 521 SRYYTLGNQERDKRINVEGNDALRSARLALIDAARVTLAAGLTLLGIPTPDNM 573


>gi|151944039|gb|EDN62332.1| mitochondrial arginyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
          Length = 643

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 224/557 (40%), Gaps = 107/557 (19%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K +  +LA +          S E  +F   
Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I   +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L            +D  Q    S  +G  V   + KSDG+  Y   D+ 
Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432
            MS R G+ + L  ++DE    +++ M   +                          K+ 
Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+    DF          
Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552

Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542
            S  +  +L +L+  LA+YP V+  A   QEP  +  YL+     ++S +   W  G+  
Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA 611

Query: 543 ----PRLRFVQANNRKL 555
               PRL    A+ + L
Sbjct: 612 DIAIPRLAVYSASRQVL 628


>gi|170028825|ref|XP_001842295.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167877980|gb|EDS41363.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 664

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 133/599 (22%), Positives = 245/599 (40%), Gaps = 124/599 (20%)

Query: 47  TNAAMILSRPLGLD----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
            NA  I+ +   LD    P  +A  I+  +   P +  V +AG GF+N++L  ++  + +
Sbjct: 120 NNAMQIVQKLKALDVKTNPRDVAVKIMEAVPQSPMISKVEVAGAGFVNVFLDKTFGAEAI 179

Query: 103 SSIVVSGIE---YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
            SI+  G++   + R       +V ++F S N    MHVGH R  ++GD++   + F G+
Sbjct: 180 MSILKDGVKPPVFARK------RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRFLEFLGH 233

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +V R  ++ D G Q   L   +  R+   L  +    P G     Y     KE   ++ S
Sbjct: 234 DVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSP---PIGDLQAFY-----KESKTRFDS 285

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH------------R 267
           +   F +  +  +VK     A      D LK   +  D  +S  +F             R
Sbjct: 286 D-EEFKKRAYACVVKLQGGDA------DSLKGWKLICD--VSRKEFQKVYDRLDVKLIER 336

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  I+ +LA+Q ++ E                D +++++      D +   +
Sbjct: 337 GESFYQKRMESIVKDLAKQQFLEED---------------DGRKIMWGENK--DGIPLTI 379

Query: 325 LKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376
           +KSDG +TY  +D+A  K + +E   + ++YV  +  + +        +R + +  AV  
Sbjct: 380 IKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFYTIFSCARRAKILDPAVHR 439

Query: 377 -KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
                  V+L E      DG   K   R+GD + L  ++DE                   
Sbjct: 440 VDHVGFGVVLGE------DGKKFKT--RSGDTVKLTELLDEGLKRSLDKLLEKERDKVLT 491

Query: 417 -----VGSDSVRFMML------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                   +SV +  +        +N+E + F F K+ E  K N   Y+ YAY R RSI 
Sbjct: 492 PEELKAAQESVAYGCIKYADLSHNRNNEYI-FSFDKMLE-DKGNTAVYLLYAYTRIRSIA 549

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R     F + D D   + +   +   D   E +L   L ++  V++  +     + L  +
Sbjct: 550 RNCGGDFAN-DID---KVIASTQLSLDHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEF 605

Query: 525 LYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +YD+++ F   +       +N +   V     K+   R+ L  A + ++    +I+G++
Sbjct: 606 VYDVSTTFTEFYDSCYCIEKNKQGEIV-----KINAGRVLLCEATSRVLGKCFDILGLK 659


>gi|207110469|ref|ZP_03244631.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 102

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 50/66 (75%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ +EFVSANPTGP+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV
Sbjct: 31  KIFLEFVSANPTGPLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSV 90

Query: 182 FWRYQQ 187
           +  Y++
Sbjct: 91  WLAYRE 96


>gi|633022|gb|AAA61486.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae]
          Length = 643

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 224/557 (40%), Gaps = 107/557 (19%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K +  +LA +          S E  +F   
Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I   +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L            +D  Q    S  +G  V   + KSDG+  Y   D+ 
Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFM--------------------------MLWRKNS 432
            MS R G+ + L  ++DE    +++ M                          +   K+ 
Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDTKSK 502

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+    DF          
Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552

Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542
            S  +  +L +L+  LA+YP V+  A   QEP  +  YL+     ++S +   W  G+  
Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA 611

Query: 543 ----PRLRFVQANNRKL 555
               PRL    A+ + L
Sbjct: 612 DIAIPRLAVYSASRQVL 628


>gi|218894150|ref|YP_002443019.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226701383|sp|B7V3E4|SYR_PSEA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218774378|emb|CAW30195.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 587

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +A  +V  I     +  V IAG GF+N 
Sbjct: 30  IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +L   L    ++    G    G   +V I+  S N    MHVGH R  ++GD +A
Sbjct: 90  FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D + LR +   VG DSV++  L +  +    F+F ++    + N   Y+ YA  R  S+F
Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+       L   +      PQ       EL L   LA++  +I N  +   P+ L  YL
Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELALAAQLAQFGDLINNVALKGVPHLLCAYL 533

Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553
           Y+LA +F   + H          +++ RLR      R
Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570


>gi|313110089|ref|ZP_07795991.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310882493|gb|EFQ41087.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 587

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +A  +V  I     +  V IAG GF+N 
Sbjct: 30  IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +L   L    ++    G    G   +V I+  S N    MHVGH R  ++GD +A
Sbjct: 90  FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D + LR +   VG DSV++  L +  +    F+F ++    + N   Y+ YA  R  S+F
Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+       L   +      PQ       EL L   LA++  +I N  +   P+ L  YL
Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELTLAAQLAQFGDLINNVALKGVPHLLCAYL 533

Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553
           Y+LA +F   + H          +++ RLR      R
Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570


>gi|15600244|ref|NP_253738.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107104151|ref|ZP_01368069.1| hypothetical protein PaerPA_01005224 [Pseudomonas aeruginosa PACS2]
 gi|254238242|ref|ZP_04931565.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|296391898|ref|ZP_06881373.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|23822207|sp|Q9HUC8|SYR_PSEAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|9951342|gb|AAG08436.1|AE004918_6 arginyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126170173|gb|EAZ55684.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 587

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +A  +V  I     +  V IAG GF+N 
Sbjct: 30  IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +L   L    ++    G    G   +V I+  S N    MHVGH R  ++GD +A
Sbjct: 90  FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D + LR +   VG DSV++  L +  +    F+F ++    + N   Y+ YA  R  S+F
Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+       L   +      PQ       EL L   LA++  +I N  +   P+ L  YL
Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELALAAQLAQFGDLINNVALKGVPHLLCAYL 533

Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553
           Y+LA +F   + H          +++ RLR      R
Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570


>gi|6321883|ref|NP_011959.1| Msr1p [Saccharomyces cerevisiae S288c]
 gi|308153546|sp|P38714|SYRM_YEAST RecName: Full=Arginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS; Flags:
           Precursor
 gi|487937|gb|AAB68931.1| Msr1p: Arginyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|190405873|gb|EDV09140.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207344651|gb|EDZ71722.1| YHR091Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|285810000|tpg|DAA06787.1| TPA: Msr1p [Saccharomyces cerevisiae S288c]
          Length = 643

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 224/557 (40%), Gaps = 107/557 (19%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K +  +LA +          S E  +F   
Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I   +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L            +D  Q    S  +G  V   + KSDG+  Y   D+ 
Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432
            MS R G+ + L  ++DE    +++ M   +                          K+ 
Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+    DF          
Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552

Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542
            S  +  +L +L+  LA+YP V+  A   QEP  +  YL+     ++S +   W  G+  
Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA 611

Query: 543 ----PRLRFVQANNRKL 555
               PRL    A+ + L
Sbjct: 612 DIAIPRLAVYSASRQVL 628


>gi|116053199|ref|YP_793520.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254244067|ref|ZP_04937389.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|122256786|sp|Q02EW6|SYR_PSEAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115588420|gb|ABJ14435.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197445|gb|EAZ61508.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 587

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +A  +V  I     +  V IAG GF+N 
Sbjct: 30  IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +L   L    ++    G    G   +V I+  S N    MHVGH R  ++GD +A
Sbjct: 90  FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D + LR +   VG DSV++  L +  +    F+F ++    + N   Y+ YA  R  S+F
Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+       L   +      PQ       EL L   LA++  +I N  +   P+ L  YL
Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELALAAQLAQFGDLINNVALKGVPHLLCAYL 533

Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553
           Y+LA +F   + H          +++ RLR      R
Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570


>gi|254432045|ref|ZP_05045748.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626498|gb|EDY39057.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 604

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 218/549 (39%), Gaps = 94/549 (17%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ L++PL   P  IA  IV ++K DP    +     IAG GFINL L P  L
Sbjct: 47  GDFQANGALPLAKPLKQPPRAIATAIVEQLKADPTFAELCGEPQIAGPGFINLTLRPERL 106

Query: 99  RKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
              ++  +        +  G G +    V ++F S N    MHVGH R  ++GD LA ++
Sbjct: 107 AAEVAERLADPRLGVPSAAGPGGEEPAPVVVDFSSPNIAKEMHVGHLRSTIIGDALARVL 166

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKEL 213
            F G+ V R  ++ D G Q   L   +     +AL   D+ DL  G     Y +   +  
Sbjct: 167 EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDL--GDLVAFYRQAKARFD 224

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDP 270
           AD+                 +  S + ++K+   D   LKA  +  D   S  +F +   
Sbjct: 225 ADE---------------AFQATSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK--- 264

Query: 271 SPIRDIID-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
             I D +D  L+ +G  +     E ++   ++      D   + +        D    P+
Sbjct: 265 --IYDRLDIRLSERGESFYNPYLEAVVADLEAAGLLVTDAGARCVFLEGVSGKDGQPLPV 322

Query: 325 L--KSDGSYTYFAADLAYFKCKYE-----RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
           +  KSDG + Y   DLA  + ++       G   +IYV  +  + +   +  VA  A   
Sbjct: 323 IVQKSDGGFNYATTDLAAIRYRFAPPPQGDGARRVIYVTDAGQASHFAGVFQVARRAGWV 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
              A++  +   LV+   DG   K+  RAGD + LR ++DE                   
Sbjct: 383 PTGARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLQEEERT 439

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V++  L +       F F ++    + N   Y+ YA  R   I
Sbjct: 440 EDEAFIEHVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGI 498

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D+   ++     R   PQE       L+    +AE    +E   +   P +L  Y
Sbjct: 499 ARKGGDLEGAVEASSL-RFSEPQEWALARELLKFDAVVAE----VEEELL---PNRLCSY 550

Query: 525 LYDLASVFH 533
           L++L+ VF+
Sbjct: 551 LFELSQVFN 559


>gi|302875611|ref|YP_003844244.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690142|ref|ZP_07632588.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578468|gb|ADL52480.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 562

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 122/542 (22%), Positives = 220/542 (40%), Gaps = 100/542 (18%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N +L    + + I+  ++  G  YG +  G+G  + I++ S N   P HVGH    V+
Sbjct: 77  YVNFFLDKGVFTKNIVEKVLSEGDSYGSSDFGQGKNICIDYSSPNIAKPFHVGHLFTTVI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203
           G++L  +  F GY      ++ D G Q   L       Y    ++N+ DL   P      
Sbjct: 137 GNSLYKMFNFVGYNSIGINHLGDWGTQFGKLI------YAYKHWSNEEDLEKDPIKELLR 190

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFI 260
           +Y+K   +   D    E L      +   ++D   +A  + +  +D  L+     +D+  
Sbjct: 191 IYVKFHDEAEKD----ETLEDEGRAYFKKLEDGDKEATELWQRFKDVSLREFKKVYDLLG 246

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--- 317
            + D + G+ S   D +D +  +                    +  K+LL  S       
Sbjct: 247 VDFDSYAGE-SFYNDKMDVIVEE--------------------LKNKKLLVESNGAQVVN 285

Query: 318 -DDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            ++ + P   +LKSDG+  Y   DLA   Y K  Y+  F+  IYV+G D S + K++  V
Sbjct: 286 LEEYNMPPCIVLKSDGATIYATRDLAAANYRKNTYD--FEKCIYVVGKDQSLHFKQIFKV 343

Query: 371 AAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              +    A + + +   LVR        K+S R GD I L  ++ E  + ++   ++  
Sbjct: 344 LELMGNDWAKECHHVPFGLVRF----ADKKLSTRKGDVIFLDELLAESVAKTLE--IINE 397

Query: 430 KNSELLDFD------------FCKVKEQSKENPVF--------------YVQYAYARCRS 463
           KN  L + +            F  +K   +++ VF              YVQY YAR +S
Sbjct: 398 KNPNLENKEDVSKKVGIGAMIFTYLKNSREKDIVFDWKEMLSFEGETGPYVQYTYARAKS 457

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+  +   + D+ L               E +L   L      I  A    EP  +  
Sbjct: 458 ILRRIGEGSGECDYTLLSSK----------EEFELAKSLEGLQAAIFQAIEKLEPSIVTR 507

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ +++  F+  ++  +       +      +   RL+LV A   +I + LN++G+++  
Sbjct: 508 YVIEVSKAFNKFYNACQ-------ITTAEDSVKNARLKLVSATTVVIKNALNLLGIDAVE 560

Query: 584 EM 585
           +M
Sbjct: 561 QM 562


>gi|303236237|ref|ZP_07322833.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483551|gb|EFL46550.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 615

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 130/601 (21%), Positives = 239/601 (39%), Gaps = 124/601 (20%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P   A+ I A +K + +  S +   KGF+NL ++P+    +L+ I  +     + +   
Sbjct: 64  NPEETAKEIGAYLKDNCNAISDYNVVKGFLNLVIAPAAWIGLLNDIHANEKFGEKQVTAD 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                +E+ S N   P+H+GH R  ++G +L+ +M  +GY+V +   +ND G  I    L
Sbjct: 124 SPLAMVEYSSPNTNKPLHLGHVRNNLLGWSLSKIMEANGYKVVKTNIVNDRGIHICKSML 183

Query: 180 SVFWRY-------QQALYNNDSDLPEGYYPGVYLKHVGKELA--------DKYSSELLNF 224
           +  W+        +QA    D  + + Y    + KH  +ELA        +    E    
Sbjct: 184 A--WQKWGNGITPEQAGKKGDHLIGDFYV--AFDKHYREELATLTAQFQQEGLDEEAAKA 239

Query: 225 PEEKWLPIVK------------DYSVQAMMKIIRD--------DLKALNIQHD-IFISED 263
             E+  P++K            D  V+A+ K++ D          KAL +  D I+   +
Sbjct: 240 KAEQESPLMKEAHDMLVKWEANDPEVRALWKMMNDWVYAGFDETYKALGVGFDKIYYESN 299

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +  G     + + + LA+  ++        K   +   D+  + L            + 
Sbjct: 300 TYLEGK----KKVEEGLAKGLFIR-------KEDNSVWADLTNEGL----------DQKL 338

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+SDG+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  
Sbjct: 339 LLRSDGTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKGL 398

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFI----------------------TLRHVVDE---- 416
           V     +    +G   KM  R G  +                       L  + +E    
Sbjct: 399 VHFSYGMVELPNG---KMKSREGTVVDADDLVASMIQNARTLSEDKVNKLEDITEEEKNN 455

Query: 417 ----VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
               VG  ++++ +L    RKN      E +DF+          N   ++QY YAR RSI
Sbjct: 456 IARIVGMGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSI 506

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     ++     P  V    +  +  E+ LI  + ++   +  A +   P  +A Y
Sbjct: 507 LRKANAQGINI-----PATV-EANAPLNEKEIALIQKMNDFGAAVAQAGVDYSPSGIANY 560

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            Y+L   F+  +           + A+       RL L   VA +I +G+ ++G+E P  
Sbjct: 561 CYELTKEFNQFYHD------YSILNADTEDEKTTRLVLAQNVAKVIKNGMELLGIEVPER 614

Query: 585 M 585
           M
Sbjct: 615 M 615


>gi|317478351|ref|ZP_07937515.1| arginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905510|gb|EFV27300.1| arginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 605

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 141/627 (22%), Positives = 265/627 (42%), Gaps = 120/627 (19%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   ++ +    + F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVAAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I     +YG       +  V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHADK-QYGIVAATDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++A +G +V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 145 LANIVAANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDD--L 249
            Y   + KH     KEL  K+ SE +N  E K       P++K+ + + ++K   +D  +
Sbjct: 198 DYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAEAESPLMKE-AREMLVKWEANDPEV 256

Query: 250 KAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDR 306
           +AL   +   ++   D+ +R     +    D +  +   Y EG     K K  +  +   
Sbjct: 257 RALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESNTYLEG-----KEKVMEGLE--- 304

Query: 307 KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
           K   +R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D MIYV+G
Sbjct: 305 KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVG 364

Query: 358 SDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           ++ +                          G V+  E    +        + L+ E++  
Sbjct: 365 NEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIDT 424

Query: 392 YRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELLDFD 438
            ++     G    ++K   D     ++   VG  ++++ +L    RKN      E +DF+
Sbjct: 425 AKETSNELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESIDFN 479

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                     N   ++QY YAR +S+ R+AK+   ++   L      P   E    E  L
Sbjct: 480 ---------GNTGPFIQYTYARIQSVLRKAKEAGLEIPAQL------PVGIELSEKEEGL 524

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           I  +A++  +++ A     P  +A Y YDL   ++  +           ++  N  + + 
Sbjct: 525 IQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAVKIF 578

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L   VA ++  G+ ++G+E P+ M
Sbjct: 579 RLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|294675038|ref|YP_003575654.1| arginine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474183|gb|ADE83572.1| arginine--tRNA ligase [Prevotella ruminicola 23]
          Length = 594

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 125/563 (22%), Positives = 230/563 (40%), Gaps = 112/563 (19%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL +      ++L +I        + +  +   V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLSVGDGAWLQLLDAIDKDERFGMKQVTDESPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G +LA +M  +G +V +   +ND G  I    L+  W     L   + + PE    G  
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPE--TSGKK 191

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-MKIIRDDLKALNIQHDIFISEDD 264
             H+   + D Y +   ++ EE     VK+   Q M  +  + +   +   H++ +    
Sbjct: 192 GDHL---IGDYYVAFDKHYREE-----VKELVAQGMDEEKAKQEAPLIKEAHEMLVK--- 240

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----------------KTTQKCDMDRKQ 308
           +   DP  +R + + +    +VY G     K                 K   K +    +
Sbjct: 241 WENNDPE-VRALWEKM--NNWVYAGFDETYKKMGVSFDKIYYESQTYLKGKAKVEEGLAK 297

Query: 309 LLFR--------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
            LF         + +  + +D+ LL +SDG+  Y   D+   + ++ +   D MIYV+G+
Sbjct: 298 GLFERHEDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTAEMRFKDYPIDKMIYVVGN 357

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRL------YRDGMPI------------- 398
           + + + + L  +   +  K   ++      +V L       R+G  +             
Sbjct: 358 EQNYHFQVLSILLDRLGFKWGKELTHFSYGMVELPNGKMKSREGTVVDADDLMALMVEDA 417

Query: 399 -KMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN-----SELLDFDFCKVKE 444
            K S   G F  +     R +   VG  ++++ +L    RKN      E +DF+      
Sbjct: 418 YKTSMELGKFDDMTEEERREIARVVGMGALKYFILKVDARKNMLFNPEESIDFN------ 471

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHL 502
               N   ++QY YAR RSI R+A+              + P  ++ D +  E++L+  +
Sbjct: 472 ---GNTGPFIQYTYARIRSILRKAE-----------AEGLKPANAQVDLAEKEVELVQKM 517

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            E+   +E A     P  +A Y Y+L  VF+  +           +   + +   +RL L
Sbjct: 518 NEFGAAVEQAGKDYSPSGIANYCYELTKVFNQFYHD------YSILNEPDEQKKAVRLML 571

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              VA II +G++++G+E P  M
Sbjct: 572 AKNVAKIIKNGMSLLGIEVPERM 594


>gi|251799320|ref|YP_003014051.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546946|gb|ACT03965.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 564

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 201/515 (39%), Gaps = 97/515 (18%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG G +V I+  S N   P  +GH R  ++G+ L +L+   GY+     ++ D G Q   
Sbjct: 101 IGGGKRVIIDMSSPNIAKPFGIGHLRSTMIGNALYNLLRKVGYDTVNVNHLGDWGTQFGK 160

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLP 231
           + ++ + ++       +  +        YL     EL  ++  E +  PE      +W  
Sbjct: 161 M-ITAYLKWGDPAGKAEDPIK------AYL-----ELYVRFHEEAVLQPELETEAREWFV 208

Query: 232 IVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGY 285
            ++    +A       I D L A N  +D      D + G+      +  +++ L RQG 
Sbjct: 209 KLESGDTEANRYWRMFIEDSLAAFNKLYDRLGVSFDHYLGESFYNDKMDAVVEQLTRQGL 268

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKC 343
           + E       S       +D + L             P +  KSDGS  Y   DLA    
Sbjct: 269 LEE-------SDGALVVRLDEEAL------------PPCIIKKSDGSSIYATRDLATAIY 309

Query: 344 KYERGFDN-MIYVMGSDHSGYVKRLEAVAA------AVSEKKAQINVLLCELVRLYRDGM 396
           ++++   N ++YV+G++ S + ++L  V        A   K     ++L        DG 
Sbjct: 310 RHDQMLGNELLYVVGAEQSLHFRQLFLVLGRMGFDWATECKHIPFGLMLM-------DGQ 362

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-----------------------SE 433
             KMS R G  + L  V+DE  + ++R +     N                       S 
Sbjct: 363 --KMSTRRGKVVFLEDVLDEAAAHALRIIEDKNPNLAGKAEVAEAVGVGAVIFGDLLHSR 420

Query: 434 LLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
           L + +F     V  + +  P  YVQY YAR +S+ R+A       + D        Q +E
Sbjct: 421 LHEVNFSLEDVVNFEGETGP--YVQYTYARTQSLLRKAGSD-GHAESDQHADAADYQYAE 477

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            D S  QL   L  YP  +  A    EP   A YL +LA  F+  + H +       +  
Sbjct: 478 GDQS-WQLAKTLMRYPAALSQAAQRYEPSVAARYLIELAQTFNRFYHHEK-------IIT 529

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N      +L LV   A  +  GL ++GV++  EM
Sbjct: 530 GNPSEQAAKLTLVRMTAETLEDGLRLLGVKALKEM 564


>gi|221218053|ref|ZP_03589519.1| arginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225549660|ref|ZP_03770626.1| arginyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192001|gb|EEE18222.1| arginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369937|gb|EEG99384.1| arginyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 585

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFDFEEMIYVVGSEQIQHFKSLFFVAE 363

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQKIENK 420

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 421 EGAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E    I NA     P  L  Y
Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|170097623|ref|XP_001880031.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645434|gb|EDR09682.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 591

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 185/467 (39%), Gaps = 82/467 (17%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           EYG NL GKG KV IE+ S N     HVGH R  ++G  LA+L    G+EVT   Y+ D 
Sbjct: 123 EYGTNLTGKGKKVVIEYSSPNIAKSFHVGHLRSTIIGGFLANLYKACGWEVTSLNYLGDW 182

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G Q   +A      Y++  Y +  +L +     ++  +V K   D  +   +     +W 
Sbjct: 183 GTQFGMIATG----YEK--YGSQEELEKDAIKHLFDVYV-KVNKDAEADPEVKVEAARWF 235

Query: 231 PIVKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             ++D    A+          +K    + + LNI  D +  E    +     +   +  L
Sbjct: 236 KRMEDGDESALKNWRVWRELSVKKYEGEYERLNIHFDEYTGESMVGK---ESMDTALKRL 292

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G + +       S   +  D+ + +L   S +V         K DG+  Y   D+  
Sbjct: 293 EELGLIAD-------SNGAKIVDLKKYKL--ESAVV--------RKKDGTSIYLTRDIGG 335

Query: 341 FKCKYER-GFDNMIYVMGSDH----SGYVKRLE---------------AVAAAVSEKKAQ 380
              +YE+  FD MIYV+ S      + + K L+                +   +S +K  
Sbjct: 336 AIERYEKYKFDKMIYVVSSQQDLHLAQFFKVLDLMEFPWAKNLVHVNYGLVQGMSTRKGT 395

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDF 437
           + V L ++++     M  +M K    +  +     V  E+G   V+   +  K      F
Sbjct: 396 V-VFLDQIIKEAASVMHDQMMKNEDKYNAVEDPETVSREIGITGVKIQDMAAKRINNYTF 454

Query: 438 DFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           ++ ++K  +    P  Y+QYA+ R  SI R+   + P           +P  S+ DT+ L
Sbjct: 455 NWDRMKSFEGDTGP--YLQYAHVRLASIGRKNPHLIP-----------LPPPSQIDTTSL 501

Query: 497 -------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                  ++   L  YP V++ A    EP  +  + + LA      W
Sbjct: 502 SSYSQAREIAFLLGTYPDVVKVALKTHEPSGVVTFAFRLAHAISSAW 548


>gi|298386069|ref|ZP_06995626.1| arginine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261297|gb|EFI04164.1| arginine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 597

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 133/593 (22%), Positives = 250/593 (42%), Gaps = 119/593 (20%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I  S  EYG   + K 
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQ-SDEEYG---LVKA 111

Query: 121 TK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           T+    V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I  
Sbjct: 112 TETSPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICK 171

Query: 177 LALSVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPE 226
             L+  W+     Y N  + PE          G Y   + KH   ELA+     +     
Sbjct: 172 SMLA--WKK----YGN-GETPESTGKKGDHLVGDYYVSFDKHYKAELAELMEKGMTKEEA 224

Query: 227 EKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           E   P++++ + + ++K    D  ++AL   + + ++   D+ +R     +    D +  
Sbjct: 225 EAASPLMQE-AREMLVKWEAGDPEVRALWEMMNNWVYAGFDETYR----KMGVGFDKIYY 279

Query: 283 QGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTY 333
           +   Y EG     K K  +  +   K   F+       + +  + +D + LL+ DG+  Y
Sbjct: 280 ESNTYLEG-----KEKVMEGLE---KGFFFKKEDGSVWADLTAEGLDHKLLLRGDGTSVY 331

Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +   
Sbjct: 332 MTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVEL 391

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            +G   KM  R G  +    +++E                             VG  +++
Sbjct: 392 PEG---KMKSREGTVVDADDLMEEMVSTAKETSQELGKLDGLTQEEADDIARIVGLGALK 448

Query: 424 FMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IF 472
           + +L    RKN      E +DF+          N   ++QY YAR +S+ R+A +   + 
Sbjct: 449 YFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVLRKAAESGIVI 499

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           P+          IP   E    E  LI  +A++  V++ A     P  +A Y YDL   +
Sbjct: 500 PEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEY 550

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +           ++  N  + + R+ L   VA ++  G+ ++G+E P+ M
Sbjct: 551 NQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPSRM 597


>gi|330872047|gb|EGH06196.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 476

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 4/170 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPSDEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY 195


>gi|331009578|gb|EGH89634.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 318

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 4/170 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + + +          ++         G   +V ++  + N    MHVGH R  ++GD +A
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y
Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY 195


>gi|169858208|ref|XP_001835750.1| arginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116503200|gb|EAU86095.1| arginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 615

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 125/539 (23%), Positives = 218/539 (40%), Gaps = 118/539 (21%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSI-----VV---SGIE--- 111
           IA+ ++ +   +  ++SV +  K F++  L+ +  +R +L+ +     VV   +G E   
Sbjct: 84  IAKKVIDKFTPNEYIESV-VHDKAFLHFRLNTNNMIRAVLTQVYELTHVVPKSAGREDGL 142

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG+N +G+G KV IE+ S N     HVGH R  ++G  LA+L    G++V    Y+ D G
Sbjct: 143 YGQNSVGEGKKVIIEYSSPNIAKSFHVGHLRSTIIGAFLANLYKTCGWDVVSMNYLGDWG 202

Query: 172 AQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK- 228
            Q   +A S + +Y  Q+AL   ++D  +  +  VY++      AD         PE K 
Sbjct: 203 TQFGMIA-SGYEKYGNQEAL---EADAIKHLF-DVYVQVNKDAEAD---------PEVKA 248

Query: 229 ----WLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               W   ++D    A+          +K   D+ + LN+  D++  E +  +     I 
Sbjct: 249 NAAAWFKRMEDGDPAALENWKVWRSMSIKKYEDEYERLNVSFDVYTGESEVGK---ESID 305

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             ++ L   G + E       S   +  ++++ +L       G  V R   K DG+  Y 
Sbjct: 306 KALERLDEMGLIEE-------SNGAKLINLEKWKL-------GKAVVR---KKDGTSIYL 348

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             D+     +YE+  FD MIYV+ S      + + K LE +    ++    IN       
Sbjct: 349 TRDIGGAIERYEKYKFDKMIYVVSSQQDLHLAQFFKVLELMEFPWAKDLLHINY------ 402

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------DSVRFMMLWRKNSELLDFDFCK 441
                G+   MS R G  + L  +++E  S        +  ++  +    +   +     
Sbjct: 403 -----GLVQGMSTRKGTVVFLNQIINEAASVMHEQMKANEEKYSAVEDPETTSREIGITG 457

Query: 442 VKEQSK-----ENPVF--------------YVQYAYARCRSIFRQAKDIFP-----DLDF 477
           VK Q        N  F              Y+QYA+ R  S+ R+   + P     DL  
Sbjct: 458 VKIQDMAAKRINNYTFNWERMLSFEGDTGPYLQYAHVRLESLKRKNPHLLPLAEPKDLKL 517

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +L      P ++       ++   L  YP V++ A    EP  +  + + LA      W
Sbjct: 518 ELLASPHTPNQAR------EIAFLLGSYPDVVKTALKTHEPSGVVTFAFRLAHAISSAW 570


>gi|198275364|ref|ZP_03207895.1| hypothetical protein BACPLE_01525 [Bacteroides plebeius DSM 17135]
 gi|198271700|gb|EDY95970.1| hypothetical protein BACPLE_01525 [Bacteroides plebeius DSM 17135]
          Length = 605

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 219/576 (38%), Gaps = 127/576 (22%)

Query: 86  KGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           KGF+NL ++     ++L+ I      GI+   N       V IE+ S N   P+H+GH R
Sbjct: 81  KGFLNLTIASDVWIELLNRIHTDNQWGIQKADN---NAPLVMIEYSSPNTNKPLHLGHVR 137

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE---- 198
             ++G  LA++MA +G +V +   +ND G  I    L+  W     L   + + PE    
Sbjct: 138 NNLLGSALANIMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSGK 190

Query: 199 ------GYYPGVYLKHVG---KELADKYSSELLNFPE-------------------EKWL 230
                 G Y   + KH     KEL  +Y +E +N  E                    KW 
Sbjct: 191 KGDHLIGDYYVAFDKHYKAEVKELMAQYQAEGMNEEEAKAKAEANSPLMLEAREMLRKWE 250

Query: 231 PIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNL- 280
               D  V+A+ K + D          K + +  D I+     +  G    +  +   L 
Sbjct: 251 --ANDPEVRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESQTYLEGKEKVMEGLEKGLF 308

Query: 281 --ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
                G V+  + P           +D K LL               + DG+  Y   D+
Sbjct: 309 YRKEDGSVWADLTPE---------GLDHKLLL---------------RGDGTSVYMTQDI 344

Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
              K +++    + MIYV+G++ + + + L  +   +  +  +  V     +    +G  
Sbjct: 345 GTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG-- 402

Query: 398 IKMSKRAGDFI-----------TLRHVVDEVGS----------DSVRFMMLWRKNSELLD 436
            KM  R G  +           T +   +E+G           D  R + L      +L 
Sbjct: 403 -KMKSREGTVVDADDLMEAMIETAKETSNELGKLDGLTQEEADDIARIVGLGALKYFILK 461

Query: 437 FDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
            D  K +    KE+  F      ++QY YAR +SI R+A +        L    VIP   
Sbjct: 462 VDARKNMTFNPKESIDFNGNTGPFIQYTYARIQSILRKATEA------GLSIPAVIPSGI 515

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           E  T E  LI  LA++  +++ A     P  LA Y YDL   ++  +           ++
Sbjct: 516 ELSTKEEGLIQMLADFTNIVKQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILR 569

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N  L + RL L   V  ++   + ++G+E P  M
Sbjct: 570 EENEALKIFRLALSQNVGKVVKLAMGLLGIEVPERM 605


>gi|325262862|ref|ZP_08129598.1| arginine--tRNA ligase [Clostridium sp. D5]
 gi|324031956|gb|EGB93235.1| arginine--tRNA ligase [Clostridium sp. D5]
          Length = 588

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 128/608 (21%), Positives = 238/608 (39%), Gaps = 110/608 (18%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  IAE ++ ++      +       GFINL +SP
Sbjct: 33  RPDLCEY---QCNGAMAAAKTYKKAPFVIAEDVLEKLGECSCFEMAEAVKPGFINLKVSP 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            Y+   L+ +       G     K   + +++   N   P+HVGH R A++G+++     
Sbjct: 90  VYVAGYLNQMA-DADSLGVEKAAKPDTIMVDYGGPNVAKPLHVGHLRSAIIGESIKRTAR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG---KE 212
           F G++V  + ++ D G Q+  +   +  R     Y +++      Y G Y K       E
Sbjct: 149 FKGHKVIGDIHLGDWGYQMGLIITELEKRKPDLPYFDEA------YEGEYPKEAPFTISE 202

Query: 213 LADKY--SSELLNFPEEKWLPIVKDYSVQA-----------------MMKIIRDDLKA-- 251
           L + Y  +S      EE      +D ++QA                 +M +   DLK   
Sbjct: 203 LEEIYPTASAFAKENEE-----YRDKALQATFLLQNGRRGYRAIWEHIMNVSVADLKKNY 257

Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             LN++ D++  E D  +  P    D++  L   GY +                 D+  L
Sbjct: 258 ENLNVEFDLWKGEADAQKYIP----DMVQRLKEDGYAH----------------YDQGAL 297

Query: 310 LFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYF---KCKYERGFDNMIYVMGSDHSGY 363
           +       D  + P   +LKSDG+  Y   DLA     +  Y+   D +IYV+      +
Sbjct: 298 VVDVQEEEDKKEVPPCMILKSDGAALYDTTDLATLVEREALYQP--DKLIYVVDKRQELH 355

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             ++   A      + ++++       +  +DG P K   R G  + L +++ E+     
Sbjct: 356 FVQVFRCAKKTGIVRPEVDMKFLGFGTMNGKDGKPFKT--REGGVMRLENLIREIDEKMY 413

Query: 423 RFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYA 457
             +M  R  +E           L    +  +  Q+ ++ VF              Y+ Y 
Sbjct: 414 DKIMDNRTVTEAEAQNTARLVGLAAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYT 473

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R +SI  +    + D    L    V    +EF+ +   L++   ++  VI+ A     
Sbjct: 474 IVRIKSILNK----YLDGKGTLESLAVKEALTEFEKA---LMLEAVKFNDVIDAAFEESA 526

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+K+  Y+YDLA+ F+  +         + +   + +     + L+  V  I+ + ++++
Sbjct: 527 PHKICAYIYDLANAFNKFYHE------TKILTEEDEERKAGYIALLKLVKEILETCIDLL 580

Query: 578 GVESPNEM 585
           G E+P  M
Sbjct: 581 GFEAPERM 588


>gi|41055429|ref|NP_956911.1| probable arginyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|34784878|gb|AAH56803.1| Arginyl-tRNA synthetase 2, mitochondrial (putative) [Danio rerio]
          Length = 597

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 147/601 (24%), Positives = 241/601 (40%), Gaps = 110/601 (18%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKIL 102
           HL  + A+   RP G D       +  +I+ D  V+ + I G+G I+  L+   L +K+L
Sbjct: 48  HLLQSGAV---RPDG-DLQNTTHTLARQIRTDAVVEEI-IPGRGVIHFRLNKLLLAQKLL 102

Query: 103 SSIVVSGIEYG-RNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
             +      +G ++ I +  +V    +EF S N     H GH R  ++G+ +A+L    G
Sbjct: 103 DQLRSDPDGFGVKSEILRQLRVGRTLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALG 162

Query: 159 YEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD-LPEGYYPG--VYL------- 206
            EV R  Y+ D G Q   L  S F R+  Q+ L     + L E    G  VYL       
Sbjct: 163 NEVIRVNYLGDWGMQFGLLG-SGFERFGSQEKLRTQPLEHLFESSVGGCCVYLYGSAVCV 221

Query: 207 -----KHVGKELADKYS--SELLNF------PEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                  V +E     S  S   +F       EE+ L + + +    + +  R   + L 
Sbjct: 222 RPQVYVQVNREAESDASVRSAAAHFFRRLEQSEEQALELWRHFREITIHEYKR-IYQRLG 280

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++ D + S + FHR +   + D + +           L     K T   D+  K      
Sbjct: 281 VEFDHY-SGESFHRAETQTVLDELRSRC---------LLKTSQKGTGVVDLSDK------ 324

Query: 314 TMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371
              GD  +   L++SDG+  Y   D+A    + +R  FD MIYV     + + ++L  + 
Sbjct: 325 ---GDMSNYATLVRSDGTSLYITRDVAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRIL 381

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            A+  + A      C  V     G+   MS R G+ + L  V++E  S  +  M   R +
Sbjct: 382 QAMGHQWAGS----CHHVAF---GLVQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRTS 434

Query: 432 SELLD---------------------------FDFCKVKEQSKENPVFYVQYAYARCRSI 464
            EL D                           F++ KV +   +  VF +QY +AR  S+
Sbjct: 435 KELEDPELTAERIGISALIVQDFKGPLISDYRFEWDKVLQAQGDTGVF-LQYTHARLCSL 493

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            RQ        DF              D+  + L+ HL  Y  V+       +P  L  +
Sbjct: 494 LRQQDCEISCSDFSPLT----------DSRSVSLLQHLLRYDEVLLQCATDLQPKHLVNF 543

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L  L+   H   S  RE P    V+ ++  +   RL L  +V S++ +G+ I+G+   ++
Sbjct: 544 LMTLS---HLVASAHRELP----VKGSSEAVAQARLCLFSSVHSVLANGMRILGITPVDK 596

Query: 585 M 585
           M
Sbjct: 597 M 597


>gi|51598847|ref|YP_073035.1| arginyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81609888|sp|Q660S8|SYR_BORGA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51573418|gb|AAU07443.1| arginyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 585

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 145/623 (23%), Positives = 258/623 (41%), Gaps = 106/623 (17%)

Query: 11  LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +KN +  I   + + K I LD+I I  ++P     G +S      LS+ L L   TI+E 
Sbjct: 9   IKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLELPIATISEE 67

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I+  +K   ++     A   ++N+ +    Y+   +  +      YG +      K+ +E
Sbjct: 68  IIKTLKSKYEIK----AMGPYLNIKIPRKEYINNTIQMVNAQKDSYGTSKYLDNKKIILE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWR 184
           F S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I  + LA   F  
Sbjct: 124 FSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGN 183

Query: 185 Y---QQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIV 233
               ++A    D  + E Y    Y K+  + E A+K   +LL   E+K       W  + 
Sbjct: 184 CITPEKAFKKGDHLIGEFYVE--YNKYSQENENAEKEIQDLLLKWEQKDKNTIELWEKLN 241

Query: 234 KDYSVQAMMKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE---- 288
           K ++++     I++  K  NI  D I++  + F  G     ++++     +G+ Y+    
Sbjct: 242 K-WAIEG----IKETYKTTNISFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDG 291

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ER 347
            I     S + +K +   KQ             + L++S+G+  Y   DL     +  E 
Sbjct: 292 AICIDLPSDSDEKAEAKAKQ-------------KVLIRSNGTSIYLTQDLGNIAIRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            FD MIYV+GS+   + K L  V+  +   K  Q+  L   +V L  DG   KM  R G+
Sbjct: 339 NFDEMIYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLI-DG---KMKSREGN 394

Query: 407 FITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
            I   +++ E                         +   ++ + +L  K++   D  F K
Sbjct: 395 VIDGDNLILELIESIMPEITQKIDNKENAKKNALNIALGAIHYYLL--KSAVHKDIVFNK 452

Query: 442 VKEQS-KENPVFYVQYAYARCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            +  S   N   Y+QY  AR  SI  +    +  I   ++F+L               E 
Sbjct: 453 KESLSFTGNSGPYIQYVGARINSILEKYNALSIPIIKKINFELLKH----------EKEW 502

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           ++I  ++E    I  A     P  L  Y Y LA  F  ++        ++ +  NN  LT
Sbjct: 503 EIIKIISELEENIIKAAKDLNPSILTNYSYSLAKHFSAYYQ------EVKVIDINNTDLT 556

Query: 557 MMRLQLVHAVASIINSGLNIIGV 579
             R++ +  +   I + ++++ +
Sbjct: 557 AARIEFLKTILQTIKNCMHLLNI 579


>gi|87306945|ref|ZP_01089091.1| arginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290318|gb|EAQ82206.1| arginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 654

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 2/143 (1%)

Query: 36  RP-RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           RP  D   G    N AM L + LG +   IA  IV +I +    + + IAG GFIN+ L 
Sbjct: 30  RPASDTKFGDYQANCAMPLKKKLGRESREIAAEIVEKIDLSDMCEPLEIAGPGFINIKLK 89

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            +++   L++  V+    G  L+ +  K  ++F S N   PMHVGH R  V+GD+LA+ +
Sbjct: 90  DAWIEAQLAA-AVTDERIGVPLVAEPKKYILDFSSPNVAKPMHVGHIRSTVIGDSLANTL 148

Query: 155 AFSGYEVTREYYINDAGAQINTL 177
            F G+EV  + ++ D G Q   +
Sbjct: 149 RFLGHEVITDNHLGDWGTQFGMI 171



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 45/290 (15%)

Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K DG++ Y   DLA  + +  E   D ++YV+      + ++L A A        ++  +
Sbjct: 380 KKDGAFLYATTDLATIQYRMNEWRPDAILYVVDFRQGDHFEKLFAAAKKWGYTDVELKHV 439

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
               V +  DG P K   R+GD + L  ++DE  S + + +    K+  L D  +  V +
Sbjct: 440 SFGTV-MGEDGKPYKT--RSGDTVGLEGLLDEAVSRAEKIVRSNDKDGLLSDEQYKDVAQ 496

Query: 445 -------------QSKE---------------NPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                        Q++E               N   Y+QYAYAR +SIFR  +     L 
Sbjct: 497 DVGIGGLKYGDLSQNRETDYVFSYDTMLALRGNTATYMQYAYARSQSIFRNGEIDIAAL- 555

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY-DLASVFHGH 535
                R+   +      +E  L   +   P  ++       P +L  YL+ +LA  +   
Sbjct: 556 -----RSSGAKICITSPAERALATKVLRLPEALQEMVADYRPNQLTIYLFEELAKAYSTF 610

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    + P L+   A  ++    RL L    A +I  GL ++G+ + ++M
Sbjct: 611 F---EQCPVLKAETAEQKQ---SRLLLCDLTARVIQQGLALLGISTVDKM 654


>gi|195498652|ref|XP_002096615.1| GE24948 [Drosophila yakuba]
 gi|194182716|gb|EDW96327.1| GE24948 [Drosophila yakuba]
          Length = 570

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 198/503 (39%), Gaps = 89/503 (17%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V   
Sbjct: 115 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV--- 171

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------EKWLPIVKDYSV 238
             Q L  +D ++       +Y  +V    A + + E+           E+       +  
Sbjct: 172 --QLLNVSDKEMQLSPIETLYKSYVAANKAAEQNPEIAQQARDLFSALEEGTDKTMAHQW 229

Query: 239 QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           Q   K   DDL      L +  DI+  E  + +     I+++++ L        G+L P 
Sbjct: 230 QQYRKYTVDDLSKVYSRLGVHFDIYEWESQYSQ---QHIQEVLEKLR-----ISGLLQPE 281

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
                            R  +V D    P++KSDGS  Y A D+A    +  R  F  ++
Sbjct: 282 HDG--------------REIVVVDGRRIPVIKSDGSTLYLARDIAALLERLSRFHFSRLL 327

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ +  + +   L   +AA+ ++      L  E ++  + G    MS R G  I L+ V
Sbjct: 328 YVVDNGQADHFNALFKTSAALDDR------LSLEQLQHVKFGRIHGMSTRQGKAIFLKDV 381

Query: 414 VDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFY------ 453
           +DE   +  +   F    R+N  L D   C +           K++ + +  F       
Sbjct: 382 LDEARDIMREKRNFSPTTRENYNLDDEHVCDILGVSAVLVNVLKQRRQRDHEFSWQQALQ 441

Query: 454 --------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHL 502
                   +QY + R  S+       F ++D D    ++ P    F T     L L+  L
Sbjct: 442 VNGDTGIKLQYTHCRLHSLLHN----FSEVDLD----DIKPDWKHFATEPADALDLLYAL 493

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A + + I  +    E   L  YL+ L +      +  R   RL   Q  + +  + RL L
Sbjct: 494 ARFDQSIWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQEPSLQKQLQRLLL 547

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
            +A    +  G+ ++G+   ++M
Sbjct: 548 FYAAKRTLRQGMELLGLRPLDQM 570


>gi|302893154|ref|XP_003045458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726384|gb|EEU39745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 635

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 138/603 (22%), Positives = 245/603 (40%), Gaps = 117/603 (19%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYG 113
           R  G  P  +AE  VA+    P ++    +G  FI+ +     L  +L  +I      YG
Sbjct: 78  RVKGKKPGELAEEWVAKFPESPLIEKPTASGP-FISFFFKTDKLTSLLLPTIRNRSDSYG 136

Query: 114 RN-----------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           +N             GK  ++ +EF S N   P H GH R  ++G  +ASL  +SG++V 
Sbjct: 137 KNPYNGLKDPSDPSAGK-KRMIVEFSSPNIAKPFHAGHLRSTIIGGFIASLYEYSGWDVV 195

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-- 219
           R  Y+ D G Q   LAL+   W  ++AL  +    P  +   +Y++ +  E++D+  +  
Sbjct: 196 RMNYLGDWGKQYGLLALAWEKWGDEEALKAD----PINHLFNLYVR-INVEMSDEKEAIE 250

Query: 220 --------------ELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQ 255
                           L+    K+   + D   +A+        + I+R       LNI+
Sbjct: 251 AKKKAGEDVTALLDASLDEQARKYFRRMTDGDEEAVKLWRRFRDLSIVRYKKTYARLNIE 310

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           +D++  E      D      ++                 KS T    D D   L+  S  
Sbjct: 311 YDVYSGESQVPESDMEEAAKVL---------------AAKSLTE---DADGAILIDFSKH 352

Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL-- 367
           V    G  +++ +L K DG+  Y   D++    + ++  FD++IYV+ S    ++K+L  
Sbjct: 353 VAGKQGKSLEKVILRKKDGTALYLTRDISELLNRQKKYNFDHIIYVVASQQDLHLKQLFK 412

Query: 368 ------------------EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                               +   +S +K  +   L +++R   + M   M K    +  
Sbjct: 413 TIELMGHDDIAKKCQHINFGMVLGMSTRKGTVK-FLDDILRDVAEKMHDVMKKNENKYSQ 471

Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465
           + +   V D +G  SV    +  K      FD   +   +    P  Y+QYA+AR  SI 
Sbjct: 472 IENPEAVADILGISSVMVQDMSGKRINNYKFDMDTMTSFEGDTGP--YLQYAHARLCSIR 529

Query: 466 RQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           R+A     +L   DF L         SE   ++  L+  L+++P V++N     EP  + 
Sbjct: 530 RKAGLTDEELAAADFTLL--------SEKHATD--LVRLLSQWPDVVQNTLKTLEPTTIL 579

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ +  V    + H      LR V  + ++L   R+ L  A   ++++G++++G+   
Sbjct: 580 TYLFKMTHVLSSSYDH------LRIV-GSEKELQKARMALYDAARIVLHNGMSLLGLTPV 632

Query: 583 NEM 585
             M
Sbjct: 633 ERM 635


>gi|302417528|ref|XP_003006595.1| arginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354197|gb|EEY16625.1| arginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 653

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 214/508 (42%), Gaps = 86/508 (16%)

Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           KG K + +EF S N   P H GH R  ++G  L+ L A +G++VTR  Y+ D G Q   L
Sbjct: 191 KGQKHMIVEFSSPNIAKPFHAGHLRSTIIGGFLSHLYAGAGWKVTRINYLGDWGKQYGLL 250

Query: 178 ALSVFWRY--QQALYNN------------DSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           AL  + +Y  ++AL  +            ++DL E       L+  GK+ A +  +E L+
Sbjct: 251 ALG-YEKYGDEKALETDPINHLFQVYVKINNDLAEEKEKIAALEKEGKD-ASELKNEGLD 308

Query: 224 FPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQHDIFISEDDFHRGDPSPI 273
               ++   + D    A+        + I+R       LN+  D +  E      D +  
Sbjct: 309 EQARRYFKAMNDGEQAALAQWKKFRDLSIVRYKQTYAQLNVTFDEYSGESQVSEEDMAAS 368

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYT 332
              +++      V +G +     K               +   G  +++P++K  DG+  
Sbjct: 369 AKTLED-KDISEVSDGAVVINFQKHV-------------AGKAGKSLEKPVIKKRDGTAL 414

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVAAAVSEKKAQ-INVLLC 386
           Y   D++    + ++  FD+MIYV+ S    ++K+L    E +    + KK Q +N    
Sbjct: 415 YLTRDISELLHREKKYNFDHMIYVVASQQDLHLKQLFKIIELMGFTETAKKVQHVNF--- 471

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSELLDFD 438
                   GM + MS R G+    + V +         + +  V+ M   R+NS     +
Sbjct: 472 --------GMVLGMSTRKGNEEKYKQVENPDAVAETLGISAIMVQDMTGKRQNSYTFSLE 523

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQ 497
                E     P  Y+QYA+AR  SI R+A     DL D DL   +++ ++        +
Sbjct: 524 AMTSFE-GDTGP--YLQYAHARLSSIMRKANIPEADLVDADL---SLLTEKHA-----TE 572

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  L++YP  ++N     EP  +  YL+ L  V    +        LR V +    L  
Sbjct: 573 LIRMLSQYPDTVQNTLKTLEPTTVLTYLFKLTHVLSSSYD------VLRVVGSEPEVLK- 625

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L ++  +++ +G+ ++G+     M
Sbjct: 626 ARLALYYSTRTVLANGMRLLGLSPVQRM 653


>gi|325265599|ref|ZP_08132290.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982947|gb|EGC18568.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 567

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 123/551 (22%), Positives = 224/551 (40%), Gaps = 104/551 (18%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++   G    N AM  ++    +P  +A+ I   +          +AG GFINL
Sbjct: 25  IVLQPAKNPDFGDFQINGAMGAAKAAKQNPRELAQKIADELNGKGAFAVAEVAGPGFINL 84

Query: 92  YLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            LSP +L   L  S+ ++       ++       I++ S N    MHVGH R +++GD+L
Sbjct: 85  RLSPEFLAAQLEGSLHIAQTPNPDTVV-------IDYSSPNLAKEMHVGHLRSSIIGDSL 137

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++ F G++V R+ ++ D G Q   L   V +  +Q   N   +L              
Sbjct: 138 ARVLGFLGHKVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA------------- 181

Query: 211 KELADKYSSELLNFPEE-KWLPIVKDYSV------QAMMKIIRDDLKALNIQHDIFISED 263
            +L   Y +  + F E+  +  + ++Y V      +A++ + R  ++ +++QH   +   
Sbjct: 182 -DLEQFYRAAKVRFDEDAAFADLSREYVVKLQGGDEAVLALWRQFVE-ISLQHAEKVYAK 239

Query: 264 ---DFHRGDPSP-------IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
                 RGD +        + +++  L  +G V                D D  +++F  
Sbjct: 240 LGLLLERGDVAGESKYNDDLHNVVKELEAKGLV---------------VDSDGAKVVFLD 284

Query: 314 TMVGDDVDRPLL---KSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEA 369
                D +       K  G + Y   DLA  + +      N ++YV+ +    + K L  
Sbjct: 285 EFKNKDGEPAAFIVQKQGGGFLYATTDLACLRYRLNMLKANRLLYVVDTRQDLHFKELFV 344

Query: 370 VAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            A         ++         + +D  P K   R+GD + L  ++DE            
Sbjct: 345 TARKAGWLPENVSAEFVGFGTMMGKDNKPFKT--RSGDTVKLVDLLDEAVERATQLVRSK 402

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          VG  +V++  L +  +    FD+  +    + N   Y+QYAY R 
Sbjct: 403 NPDLSEAEAAKIGQTVGIGAVKYADLSKNRTSDYVFDWDNML-SFEGNTAPYLQYAYTRV 461

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           +S+FR+A       D+D+    V+ +       E QL V L ++  V+++      P+ L
Sbjct: 462 QSVFRKAG------DWDVQAAFVLTE-----PLEQQLAVELLKFEDVLQSVAETNFPHYL 510

Query: 522 AFYLYDLASVF 532
           A YLY LA++F
Sbjct: 511 AAYLYQLATLF 521


>gi|270339605|ref|ZP_06005404.2| arginine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334434|gb|EFA45220.1| arginine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 615

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 236/571 (41%), Gaps = 109/571 (19%)

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGH 140
           F A  GF+NL ++P     +L+ I     +YG   +   +K V IE+ S N   P+H+GH
Sbjct: 87  FNAVGGFLNLVIAPDAWIALLNDINADA-KYGETPVSADSKLVMIEYSSPNTNKPLHLGH 145

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++G +LA +M  +G +V +   +ND G  I    L+  W+     + N++      
Sbjct: 146 VRNNLLGWSLAKIMEANGNKVVKTNIVNDRGIHICKSMLA--WKK----WGNNATPESAG 199

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             G +L      + D Y +   ++ EE     V +   Q M + + ++      + D  +
Sbjct: 200 KKGDHL------IGDYYVAFDKHYREE-----VAELKAQLMAEGLGEEEAEEKAKADAPL 248

Query: 261 SED------DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT---- 298
             +       + +GDP  +R++   +    +VY G     K            SKT    
Sbjct: 249 IREAREMLVKWEQGDPE-VRELWQTM--NNWVYAGFDETYKALGVSFDKIYYESKTYLEG 305

Query: 299 TQKCDMD-RKQLLFR-------STMVGDDVDRP-LLKSDGSYTYFAADLAYFKCKY-ERG 348
            +K +    K L FR       + +  + +D+  LL+SDG+  Y   D+     ++ +  
Sbjct: 306 KKKVEEGLEKGLFFRKEDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTADLRFKDYP 365

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMP---------- 397
            D MIYV+G++ + + + L  +   +  K  +  V     +V L    M           
Sbjct: 366 IDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNGKMKSREGTVVDAD 425

Query: 398 ------IKMSKRAGDFITLRHVVDE---------VGSDSVRFMML---WRKN-----SEL 434
                 I+ ++R  D +   H + E         VG  ++++ +L    RKN      E 
Sbjct: 426 DLIETMIEDARRTSDELGKFHDMAEEEKQEVARIVGLGALKYFILKVDARKNMLFNPEES 485

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +DF+          N   ++QY +AR RSI R+A+     +  +L      P +S  +  
Sbjct: 486 IDFN---------GNTGPFIQYTHARIRSILRKAEAEGITIPAEL------PADSPLNEK 530

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E+ LI  L E+   +++A     P  +A Y Y+L   F+  +           + A+   
Sbjct: 531 EISLIQKLDEFKVAVKDAGENYNPAGIANYCYELTKDFNQFYHD------YSILNADTEA 584

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + RL L   VA  I + + ++G+E P  M
Sbjct: 585 QKITRLVLAANVAKTIKNAMELLGIEVPERM 615


>gi|152988976|ref|YP_001351107.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166232823|sp|A6VDH2|SYR_PSEA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150964134|gb|ABR86159.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 587

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  +D +HG  ++N AM+L++P G+ P  +A  +V  +     +  V IAG GF+N 
Sbjct: 30  IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLATRLVEALPAHEQLAKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +    +L   L    ++    G    G   +V I+  S N    MHVGH R  ++GD +A
Sbjct: 90  FQDHIWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 25/160 (15%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D   LR +   VG DSV++  L +  +    F+F ++    + N   Y+ YA  R  S+F
Sbjct: 424 DEAQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482

Query: 466 R---QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           R   Q ++        L  R V+ Q       EL L   LA++  ++ N  +   P+ L 
Sbjct: 483 RKLGQGRE-------QLGGRIVLEQ-----PQELALAAQLAQFGDLLNNVALKGVPHLLC 530

Query: 523 FYLYDLASVFHGHWSH---------GRENPRLRFVQANNR 553
            YLY+LA +F   + H          +++ RLR      R
Sbjct: 531 AYLYELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570


>gi|224048451|ref|XP_002198225.1| PREDICTED: arginyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 579

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 240/604 (39%), Gaps = 96/604 (15%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--DPLTIAELIVARIKIDPDVDSVFIA 84
           K +  + + + R  A   LS  + +  S   GL  D    A+ +  R+K D  V S   A
Sbjct: 27  KSISAVPVSKKRHVADFQLSIASIIENSSGDGLAQDLHLQAQQLAERLKCDSVV-SAISA 85

Query: 85  GKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVG 139
           G G +N  ++   L K +L  +   G EYG       T    K  IEF S N     H+G
Sbjct: 86  GPGTVNFTINRELLAKTVLQQVWKDGSEYGVKSELFSTVPRQKAVIEFSSPNIAKKFHIG 145

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R  +VG+ +A+L    G+EV R  Y+ D G Q   L +  F  +        S L   
Sbjct: 146 HLRSTMVGNFIANLKVALGHEVVRINYLGDWGMQFGLLGVG-FQSFGNKEKLKSSPLQHL 204

Query: 200 YYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKIIRDDLKA 251
           +   V +         K+LA  +  +L    E+  L I K   D S++  ++I     K 
Sbjct: 205 FEVYVQINQAAEDENIKKLAKDFFRKLEEHDEQT-LSIWKQFRDLSIEEYIRI----YKR 259

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L +  D +  E  +        ++++  L  +G + + I      K T   D+  K+ L 
Sbjct: 260 LGVHFDEYSGESFYQE----KAQEVLKMLEDKGLLQKTI------KGTGIVDLSEKKDLS 309

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
             + V        ++SDG+  Y   DLA    +  +  +D MIYV     S + + L  +
Sbjct: 310 TFSTV--------MRSDGTSLYITRDLAAAIDRMNKHSWDTMIYVTDKSQSNHFQHLFQI 361

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              +    A+     C+ V     G+   M  R G+ I L  V++EV S  ++ M   + 
Sbjct: 362 LKLMGYDWAE----RCQHVSF---GLVQGMKTRRGEVIFLEDVLNEVRSRMLQNMTSTKT 414

Query: 431 NSELL-------------------------DFDFCKVKE-QSKENPVFYVQYAYARCRSI 464
             E+                          D+ F   +  QS+ +   ++QY YAR  S+
Sbjct: 415 TKEIQDPVETAEKVGLAALIIQDFRGLLSSDYQFSWDRALQSRGDTGVFLQYTYARLHSL 474

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            +   +       +L   NV   +     S LQ   HL  Y  V+  ++   +P  +  Y
Sbjct: 475 EQMHGNA------ELTDVNVSCLQEPDAISVLQ---HLLRYDEVLYRSSQDLQPKHIVSY 525

Query: 525 LYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           L     LA+V H      +  P    V+ +   +   RL L HA  S++ +G+ ++G+  
Sbjct: 526 LLTLSHLAAVAH------KTLP----VKGSAPAVAQARLCLFHAARSVLANGMKLLGITP 575

Query: 582 PNEM 585
             +M
Sbjct: 576 VTQM 579


>gi|71028762|ref|XP_764024.1| arginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350978|gb|EAN31741.1| arginyl-tRNA synthetase, putative [Theileria parva]
          Length = 629

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 138/627 (22%), Positives = 245/627 (39%), Gaps = 147/627 (23%)

Query: 41  AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK 100
           A  HLS N+           P  +AE++ + I  +    S+ ++ +GF+   LS  ++ +
Sbjct: 56  AKDHLSVNS-----------PQELAEMVKSNITSNS-FSSINVSPQGFMTFVLSNDWIEQ 103

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL------- 153
            + S+   G    ++    G  V I+F S N    MHVGH R  V+GD+L +L       
Sbjct: 104 EIRSLAKYGPSVDKSTKKHGETVVIDFSSPNIAKEMHVGHLRSTVIGDSLGTLHNYLTKY 163

Query: 154 ----------------MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSD 195
                           + F GY+V R  ++ D G Q   L   +F +Y   + N  + SD
Sbjct: 164 LYITLLRRIYLFVARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFVSNMPSISD 223

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFP---EEKWL--PIVKDYSVQAMMKIIRDDLK 250
             + Y        V +E   K  S ++      EE  L   ++ D S+ +  +I     K
Sbjct: 224 FTKFYKEAKLRMDVDEEFKKKSRSRVVKLQSGDEESKLVWKVLCDISLDSFNRI----YK 279

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            L+I+ +IF  E  ++   P  ++D+ D  +A++    EG L                 +
Sbjct: 280 RLDIKFEIF-GESFYNDMIPEIVKDLQDRGIAQES---EGAL-----------------V 318

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLE 368
           +F     G  V   L+KSDG + Y + D+A  + + +E   D +IYV     S + ++L 
Sbjct: 319 IFTD---GSPVPLMLVKSDGGFGYDSTDMACLRYRTHELKADWIIYVTDIGQSEHFQKL- 374

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE----- 416
                   K AQ+    CE VR+   G  +       K   R+GD + L  ++DE     
Sbjct: 375 -------FKSAQL-AGWCENVRIDHVGFGMVQNELGEKFKTRSGDTVKLVDLLDEAVRRS 426

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G  SV++  L    +    F F K+ +  + N   Y+ Y
Sbjct: 427 KLELEKRDPNIPNLDEVAEALGYGSVKYFDLNHSVTTNYKFSFDKMLD-PRGNTAVYMFY 485

Query: 457 AYARCRSIFRQAKD------------------IFPDLDFDLFPRNVIPQESEFDT----- 493
           +YAR   IF++A+                   +  +   ++   + +P E +        
Sbjct: 486 SYARICQIFKKAESKTADGTETNNVETSDNRPVIVEDSVEVNGTSSVPNEVDLSKLVIEH 545

Query: 494 -SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +E+ L   L ++P +++         +L  YLY+L+  F   ++           +   
Sbjct: 546 PTEVALAKCLLKFPSILDQIHKDLAINRLTDYLYELSVQFSSFYTK---------CKVVG 596

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579
             L   RL L      ++ +   +IG+
Sbjct: 597 DPLQESRLILCSCTKEVMRTCFQLIGI 623


>gi|15594939|ref|NP_212728.1| arginyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915064|sp|O51540|SYR_BORBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2688523|gb|AAC66956.1| arginyl-tRNA synthetase (argS) [Borrelia burgdorferi B31]
          Length = 591

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 90  YLNIKISRKEYINNTIQMVNTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 149

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 150 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 209

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 210 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 267

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 268 IYLESEIFKIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 317

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 318 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 369

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 370 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 426

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 427 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 486

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E    I NA     P  L  Y
Sbjct: 487 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 536

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 537 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 585


>gi|224533617|ref|ZP_03674206.1| arginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225548678|ref|ZP_03769725.1| arginyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224513290|gb|EEF83652.1| arginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225370708|gb|EEH00144.1| arginyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 585

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 420

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E    I NA     P  L  Y
Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|315651308|ref|ZP_07904336.1| arginine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315486460|gb|EFU76814.1| arginine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 590

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 130/610 (21%), Positives = 241/610 (39%), Gaps = 112/610 (18%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA  +V  ++     D +     GFIN+ +S 
Sbjct: 33  RPDLCEY---QCNGAMAAAKVFKKKPIDIANEVVELLRESDSFDKIEAVMPGFININISN 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S++ K +  +  +  +YG        K+ I++  AN   P+H+GH R A++G++L  +  
Sbjct: 90  SFIEKYIKDMS-NAPKYGIEFDSPAKKIIIDYGGANVAKPLHIGHLRSAIIGESLKRMGR 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202
           F G  +  + ++ D G QI  +   +  R    +Y   N D + P          E  YP
Sbjct: 149 FFGNGMIADVHLGDWGLQIGLIIEELRERKPDLVYFKENYDGEFPKEAPFTLNDLEELYP 208

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK----ALNIQHDI 258
               K    E   + + E     +  + P    +  + +M +  +DLK    +L +  D+
Sbjct: 209 AASKKSKVDEGFRQRAQEATLELQNGYKPYRAIW--RHIMNLSIEDLKKNYGSLLVDFDL 266

Query: 259 FISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +  E D     P  I+D+ D  +AR   V EG                   L+    M G
Sbjct: 267 WKGESDADPYIPDLIKDLEDRKIAR---VSEG------------------ALVVDIAMDG 305

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD---HSGYVKRLEA 369
           D  + P   + KSDG+  Y  +DL     + E+ +  D  IY+       H     R+  
Sbjct: 306 DKKELPPCIIRKSDGAALYATSDLGTL-IEREKLYSPDEYIYIADKRQELHYTQFFRVAK 364

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +A  V +      +    +    +DG P+K   R G  + L  V+ ++  D+V F  +  
Sbjct: 365 IAGIVPDNHLLKYIGFGTING--KDGKPLKT--RDGGVVRLETVIKDI-EDAV-FAKIKE 418

Query: 430 KNSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461
              E+ D                +  +  Q+ ++ +F              Y+ Y   R 
Sbjct: 419 TRDEVSDEEARNTAKIVGLAAIKYADLSNQAAKDYIFDIDRFTSFEGNTGPYILYTIVRI 478

Query: 462 RSIFRQ------AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           +SI  +       K    DL         IP+E        +L + LA Y  ++  A   
Sbjct: 479 KSILEKYYESGNEKVSLNDL--------TIPKED----IHKKLYMELAGYNEIMRAAWTE 526

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+K+  ++Y +++ F+  +        ++ +  ++ +     L  +     I+ S +N
Sbjct: 527 LAPHKICQFIYSVSNTFNSFYHE------IKILSESDEEKKKGYLATILLTKKILESAIN 580

Query: 576 IIGVESPNEM 585
           ++G+E+P++M
Sbjct: 581 LLGIEAPDKM 590


>gi|237736640|ref|ZP_04567121.1| arginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420502|gb|EEO35549.1| arginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 570

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           K L +I I    +   G   TN AM+ S+ +G +P  IA+ IV  +  +  ++ + IAG 
Sbjct: 23  KELKKIEISVATNEKFGDFQTNFAMMNSKIIGNNPRAIAQEIVDNLVENSVIEKLEIAGP 82

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN++L   YL ++L         Y  + + +   V I+F S N    MH+GH R  ++
Sbjct: 83  GFINIFLKSEYLGELLKKSREEN--YDFSFLNREGDVVIDFSSPNIAKRMHIGHLRSTII 140

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           GD++A +  + GY V  + +I D G Q   L + 
Sbjct: 141 GDSIARIYRYLGYHVVADNHIGDWGTQFGKLIIG 174


>gi|169824560|ref|YP_001692171.1| arginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831365|dbj|BAG08281.1| arginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 564

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 143/618 (23%), Positives = 254/618 (41%), Gaps = 94/618 (15%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +K  +   D  +  E++I D  +IE P +   G  +      L++     P  IA
Sbjct: 3   NFKDEVKKIILGFDTGL-TEEEISD--LIEIPPNSEMGDYAF-PVFKLAKTFRKAPNLIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKV 123
           E +  +   + ++  +   G  ++N +++ S   K++ S++   I  ++G + IG G  V
Sbjct: 59  EELAKKDFENENIKKIANVGP-YVNFFVNNS---KLIESVLTEAIKDDFGSSHIGVGKNV 114

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            ++F S N   P H+GH R  V+G+ + ++M    +  T   YI D G Q   + +S + 
Sbjct: 115 VLDFSSTNIAKPFHIGHLRSTVIGNAIRNIMKHQDFNTTGVNYIGDYGTQFGMM-ISAYL 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDYSVQAM 241
           ++      N   + E     V    V KE  + Y  E  +     W   +  KD +   +
Sbjct: 174 KWGDEDKINADPIKELLNLYVKYNKVAKE-DEAYMDEARD-----WFDKLEKKDPTAVKL 227

Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               R+  LK     +D+   + D   G+    + I D L                    
Sbjct: 228 WSWFREISLKEFQRVYDLLGVKFDNFNGESFHSQFIGDALEA------------------ 269

Query: 301 KCDMDRKQLLFRS----TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFD 350
              +D+K LL  S     +  DD + P   + KS+GS TY   D+A   Y K  Y+  F 
Sbjct: 270 ---IDKKNLLEESDGAMIINLDDENLPPVLIKKSNGSSTYLTRDIATAMYRKKTYD--FY 324

Query: 351 NMIYVMGSDHSGYVKRLEAVA----------------AAVSEKKAQIN------VLLCEL 388
             +YV+ S    + ++L AV                   VS K   +       + L ++
Sbjct: 325 KNVYVVASQQKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDV 384

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +    D     + +R  +      V  +VG  +V F  L+    +   FD+ +V     E
Sbjct: 385 LNRAIDKTKSIIEERNPNLEHKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE 444

Query: 449 NPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
               Y QY +AR  SI  + + ++  +  FDL            D +E+ ++ HL+++  
Sbjct: 445 TGP-YTQYTFARSCSILDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFDE 493

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+ NAT   EP  L  Y  +LA +F+  ++    N  +  V+    +L   RL L + V 
Sbjct: 494 VLLNATEKYEPSFLTRYTVELAKLFNKFYA----NCPINTVE---DELKYQRLYLTYCVN 546

Query: 568 SIINSGLNIIGVESPNEM 585
             +   L+++G+E+P  M
Sbjct: 547 KCLKLSLSLLGIEAPVRM 564


>gi|228471836|ref|ZP_04056609.1| arginine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276989|gb|EEK15684.1| arginine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 596

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 123/572 (21%), Positives = 223/572 (38%), Gaps = 131/572 (22%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL +  +Y    L  I     +YG+  I K +  V +E+ S N   P+H+GH R  
Sbjct: 84  KGFLNLSICENYFLHFLHQIAPEK-DYGKKPITKDSPAVIVEYSSPNTNKPLHLGHIRNN 142

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNND-SDLPEGYY 201
           ++G ++A ++  +G +V +   IND G  I  + +A  +F + +      +  D   G Y
Sbjct: 143 LLGFSMAKIIEATGKKVYKTQIINDRGIHICKSMIAWQLFGKGETPESTGEKGDKLVGKY 202

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             ++ K   +E+A   S+       E+  PI      Q M+++                 
Sbjct: 203 YVLFDKAYKEEIAGLISAGKTKEEAEREAPIF--LKAQEMLRL----------------- 243

Query: 262 EDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
              + +GDP  +      L RQ   +VY+G      +        DR      + ++G D
Sbjct: 244 ---WEQGDPETLA-----LWRQMNQWVYDGF---EVTYHNLGVSFDRNYYESETYLLGKD 292

Query: 320 V----------------------------DRPLLKSDGSYTYFAADLAYFKCKYERGF-- 349
           +                            ++ +L+SDG+  Y   DL     + E  F  
Sbjct: 293 IVQRGLDEGVFYRKEDGSVWIDLTAEGLDEKLVLRSDGTSVYITQDLGTATKRIEEDFPK 352

Query: 350 -DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            + MIY +G++   + K L  +   +    A+ +  L   +V L       KM  R G  
Sbjct: 353 VEGMIYTVGNEQDYHFKVLFLILQKLGYTWAKNLYHLSYGMVELPNG----KMKSREGTV 408

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           +    +++E                             +G  ++++ +L     + + F+
Sbjct: 409 VDADDLMEEMVQVAQELSQELGKLEGYSDQQKEQLYRVIGLGALKYYILKVDPKKKIAFN 468

Query: 439 FCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             + +  Q    P  ++QY YAR +SI R+A+               +P+       E +
Sbjct: 469 PQESIDFQGNTGP--FIQYTYARIQSILRRAETC------------ELPKSVSLHPKEKE 514

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNR 553
           LI  L+ +P V++NA     P  +A Y+YDL   F+  + +    G E+   R       
Sbjct: 515 LIKLLSLFPEVVQNAADTYSPALIANYVYDLVKEFNSFYQNVSILGEEDTDKR------- 567

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +R+ L   V  +I  G +++G+E P  M
Sbjct: 568 ---SLRVHLSRKVGEVIAIGFDLLGIEVPERM 596


>gi|325860461|ref|ZP_08173573.1| arginine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482119|gb|EGC85140.1| arginine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 606

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 128/574 (22%), Positives = 233/574 (40%), Gaps = 122/574 (21%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ +    +L+ I        + +      V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY----QQALYNNDSDLPEGY 200
           +G +LA +M  +G +V +   +ND G  I    L+   W      ++A    D  + + Y
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLAWLKWGNGITPEKAGKKGDHLIGDFY 200

Query: 201 YPGVYLKHVGKE---LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
              ++ KH  +E   L ++Y  E +              +  A  +    D   +   H+
Sbjct: 201 V--LFDKHFKEECRQLQEQYEKEGM--------------TPDAAKEKAEQDAPLIKEAHE 244

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT----TQK 301
           + +    + +GDP  +R + + +    +VY G     K            S T     +K
Sbjct: 245 MLVK---WEQGDPE-VRALWEKM--NSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKK 298

Query: 302 CDMD-RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDN 351
            +   RK L FR       + +  + +D+ LL + DG+  Y   D+   + ++ +   D 
Sbjct: 299 VEEGLRKGLFFRKDDNSVWADLTKEGLDQKLLLRKDGTSVYMTQDIGTAEMRFNDFPIDK 358

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
           MIYV+G++ + + + L  +   +  K  +  V     +    +G   KM  R G  +   
Sbjct: 359 MIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVDAD 415

Query: 409 -------------------TLRHVVDE--------VGSDSVRFMML---WRKN-----SE 433
                               L  + +E        VG  ++++ +L    RKN      E
Sbjct: 416 DLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNMLFNPEE 475

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEF 491
            +DF+          N   ++QY YAR RSI R+  A+DI       L P + +  ++  
Sbjct: 476 SIDFN---------GNTGPFIQYTYARIRSILRKAAAQDI-------LLPAS-LADDAPL 518

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E++LI  L ++   +  A I   P  +A Y Y+L   F+  +           + A+
Sbjct: 519 NEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD------YSILSAD 572

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + RL L   VA +I +G+ ++G+E P  M
Sbjct: 573 TEAEKITRLVLAKNVAKVIRNGMALLGIEVPERM 606


>gi|224531535|ref|ZP_03672167.1| arginyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511000|gb|EEF81406.1| arginyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 585

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 140/630 (22%), Positives = 250/630 (39%), Gaps = 104/630 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59
           +  +   ++K  +  I   + + K I LD+I I  ++P     G +S      LS+ L L
Sbjct: 1   MIKNVKKQIKTEISTIVSNLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLQL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117
              TI+E I+  +K     D   I   G ++N+  S   Y+   +  +      YG +  
Sbjct: 60  SIATISEEIIKTLK-----DKYEIKAMGPYLNIKFSRKEYINNTIQMVNTQKDTYGTSKY 114

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I   
Sbjct: 115 LDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICKS 174

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------KWLP 231
            L+    Y++  + ND    +    G +L        +KYS E  N   E      KW  
Sbjct: 175 MLA----YKK--FGNDITPEKALKKGDHLIGDFYVKYNKYSQENENAENEIQDLLLKWEQ 228

Query: 232 IVKDYSVQAMMKI--------IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLAR 282
             KD +   + K         I++  K  N   D I++  + F  G     ++++     
Sbjct: 229 --KDVNTIELWKKLNKWAIEGIKETYKITNTSFDKIYLESEIFEIG-----KNVVLEGLE 281

Query: 283 QGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +G  Y+     I       + +K D + KQ             + L++ +G+  Y   DL
Sbjct: 282 KGLCYKREDGAICIDLPLDSNEKADTEVKQ-------------KVLIRPNGTSIYLTQDL 328

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                +  E  FD MIYV+GS+   + K L  VA  +   K Q  + L   +    DG  
Sbjct: 329 GNITVRIKEFNFDEMIYVVGSEQIQHFKSLFFVAEKLGISKNQKLIHLSHGMVNLIDG-- 386

Query: 398 IKMSKRAGDFITLRHVVDEVGSDS---VRFMMLWRKNSELLDFDFC-------KVKEQSK 447
            KM  R G+ I   +++ ++   +   +   +  ++N++ +  +          +K    
Sbjct: 387 -KMKSREGNVIDADNLILDLAESTAPEITQKIEDKENAKKIALNIALGAIHYYLLKSAVH 445

Query: 448 ENPVF--------------YVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQES 489
           ++ VF              Y+QY  AR  SI  +       I   ++ +L          
Sbjct: 446 KDIVFNKKESLSFTGNSGPYIQYVGARINSILEKYNTLSIPIMEKINLELLKHE------ 499

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                E ++I  ++E    I  A     P  L  Y Y LA  F  ++        ++ + 
Sbjct: 500 ----KEWEIIKIISELEENIIKAVKDLNPSILTSYSYSLAKHFSAYYQ------EVKVID 549

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            NN  LT  R++ + A+   I + + ++ +
Sbjct: 550 INNTDLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|302854025|ref|XP_002958524.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f.
           nagariensis]
 gi|300256171|gb|EFJ40444.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f.
           nagariensis]
          Length = 656

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 208/525 (39%), Gaps = 108/525 (20%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  IV  +  +  +    +AG GFIN+ LS   L   LS ++V G+         G
Sbjct: 69  PRDVATAIVGALPANGLIAETSLAGPGFINIRLSRDSLSTRLSEMLVKGLASWAPTGYIG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178
            KV I+F S N    MHVGH R  ++GDTL  +  + G +V R  ++ D G Q   L   
Sbjct: 129 KKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRIFEYCGADVLRLNHVGDWGTQFGMLIEH 188

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           ++   R + A    D D+ E             +L + Y +    F EE+     K  + 
Sbjct: 189 MADARRLRVAAGGEDKDMDEDV----------ADLQELYRAAKKRFDEEEEF---KTRAR 235

Query: 239 QAMMKIIRDDLKAL-NIQHDIFISEDDF------------HRGDP--SP-IRDIIDNLAR 282
           +A+ ++   D ++L + Q     S  +F             RG+   +P ++D+++ L  
Sbjct: 236 EAVTRLQSGDPESLASWQRICAASRREFEAIYSRLGVTLQERGESFYNPMLKDVVEEL-- 293

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                       K+      D     +       G  V   + KSDG + Y + D+A  K
Sbjct: 294 ------------KAAGVATIDNGAACVFVE----GQSVPLIVQKSDGGFGYASTDMAAIK 337

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA----VSEKKAQINVLLCELVRLYRDGMP 397
            +  E   D +IYV     S + + + A A      V     +++ +   LV L  DG  
Sbjct: 338 HRLNEEKADWIIYVTDVGQSQHFELVFAAAKKAGWLVDGSGPKVSHVGFGLV-LGEDGK- 395

Query: 398 IKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRFMM 426
            +   R+GD + L  ++DE                               +G  +V++  
Sbjct: 396 -RFRTRSGDLVRLVELLDEAKSRCAATIRERRAEAGEEVNEAEVEDAACAMGYGAVKYAD 454

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIF---PDLDFDL-FP 481
           L    +    F F ++    K N   Y+ YA+AR   I R+A KD++    D    L  P
Sbjct: 455 LKNHRTTNYKFSFDEML-NLKGNTAVYLLYAHARIAGIVRKADKDVYALAADTPISLDHP 513

Query: 482 RNVIPQESEFDTS--------------ELQLIVHLAEYPRVIENA 512
           +++ P  S F  S              EL+L +HL + P  +E+A
Sbjct: 514 KHLYPSPSLFWPSHATVTATYFSPRLQELELALHLCKLPEALEDA 558


>gi|255546293|ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis]
 gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase, putative [Ricinus communis]
          Length = 592

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 128/577 (22%), Positives = 229/577 (39%), Gaps = 120/577 (20%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119
           P  + + I+  +     ++S  +AG GF+N+ LS  ++ K +  +++ GI+ +   L+ K
Sbjct: 72  PPAVGQAIMKNLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDGIDSWAPKLLVK 131

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178
             +  ++F S N    MHVGH R  ++GDTLA ++ FS  +V R  ++ D G Q   L  
Sbjct: 132 --RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVGDWGTQFGMLIE 189

Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                              L  F++  +  ++ DS+  E     V     G+    KY  
Sbjct: 190 FLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQGGE---PKY-- 244

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                  + W  I  D S +   K+     + L +Q    + E      +P  I  IID 
Sbjct: 245 ------RQAWAQIC-DISRKEFDKV----YQRLGVQ----LEEKGESFYNPY-IPGIIDA 288

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L+ QG V E                +  +++F   + G ++   ++KSDG + Y + DL 
Sbjct: 289 LSNQGLVEES---------------EGARVIF---IEGVNIPLIVVKSDGGFNYASTDLT 330

Query: 340 --YFKCKYERGFDNMIYVMGSDHSGY-------VKRLEAVAA---------------AVS 375
             +++   E+  + +IYV       +        KR   + A                + 
Sbjct: 331 ALWYRLNEEKA-EWIIYVTDVGQQQHFDMVFKAAKRASWLPADDSMFPKASHVGFGLVLG 389

Query: 376 EKKAQINVLLCELVRLY--------RDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRFM 425
           +   +      E+VRL         R    +    +A ++    L  + + +G  +V++ 
Sbjct: 390 DDGKRFRTRATEVVRLVDLLDEAKTRSKAVLVERGKAEEWTEQELEQIAEAIGYGAVKYA 449

Query: 426 MLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            L  KN+ L ++ F   +    K N   Y+ YA+AR  SI R++     +L        V
Sbjct: 450 DL--KNNRLTNYTFNYDQMLNDKGNTAVYLLYAHARICSIIRKSGRDMEEL--KKMGSLV 505

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--EN 542
           +         E  L +HL ++   +E A     P  L  YLY+L+  F   +S+ +  E+
Sbjct: 506 LDH-----PDERSLGLHLLQFAETVEEACTNLLPNVLCEYLYNLSEYFTKFYSNCKVVES 560

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           P               RL L  A A ++     ++G+
Sbjct: 561 PE-----------ETSRLLLCEATAVVMRKCFFLLGI 586


>gi|239623481|ref|ZP_04666512.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521512|gb|EEQ61378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 627

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 120/550 (21%), Positives = 231/550 (42%), Gaps = 87/550 (15%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFINL +S  +L + +  +  +  + G     K   V +++  AN   P+HVGH R A++
Sbjct: 114 GFINLKVSGQFLAEYMVRMAAAD-KLGLEAPEKPETVIVDYGGANVAKPLHVGHLRAAII 172

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLP------ 197
           G+++  +  F G+    + ++ D G Q+  +   +  R    +Y ++S   + P      
Sbjct: 173 GESIKRMGRFLGHRTIGDVHLGDWGLQMGLIIEELRDRKPGLVYFDESFTGEFPAEAPFT 232

Query: 198 ----EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-- 251
               E  YP    K    E   + + +     ++ + P    +  Q +M +  +DLK   
Sbjct: 233 ISELEEIYPAASAKSKTDEAFKERAHQATLKLQKGYAPFRAIW--QHIMSVSVEDLKKNY 290

Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRK 307
             LN++ D++  E D    +P  I D+I  L  +G  YE  G L    ++ T     D K
Sbjct: 291 SNLNVEFDLWKGESD---AEPY-IADMIQMLVDKGLAYESQGALVVDVAEET-----DSK 341

Query: 308 QLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGY 363
           ++             P L  KSDG+  Y  +DLA    + E+ F  D  IYV+      +
Sbjct: 342 EI------------PPCLIRKSDGASLYATSDLATI-VEREQDFHPDRYIYVVDKRQGMH 388

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            +++  VA      K    ++      +  +DG P K   R G  + L  ++ E+     
Sbjct: 389 FEQVFRVAKKAGIVKQDTPMIFLGFGTMNGKDGKPFKT--REGGVMRLETLIAEINEAVY 446

Query: 423 RFMM--LWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQ 455
             +M    R  SE           L    +  +  Q+ ++ VF              Y+ 
Sbjct: 447 ARIMEDEERTVSEEEARRTAGIVGLAALKYGDLSNQAVKDYVFDIERFTAFSGNTGPYIL 506

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y   R +SI  + ++    +  D   +N++P  ++   SE  L++ ++ Y  V+E+    
Sbjct: 507 YTIVRIKSILNKYRENGGIVSEDALEKNILPAAND---SEKALMLLISRYNEVLESGFAE 563

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+K+  Y+Y+L++ F+  +       ++       RK +   + L+     ++ + + 
Sbjct: 564 TAPHKICQYIYELSNAFNSFY----HETKILTEPDEARKDSF--IGLITLAKRVLETCIG 617

Query: 576 IIGVESPNEM 585
           ++G+E+P+ M
Sbjct: 618 LLGIEAPDRM 627


>gi|29348238|ref|NP_811741.1| arginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569396|ref|ZP_04846806.1| arginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|38372519|sp|Q8A3X5|SYR_BACTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29340141|gb|AAO77935.1| arginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841415|gb|EES69496.1| arginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 597

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 133/593 (22%), Positives = 248/593 (41%), Gaps = 119/593 (20%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I  S  EYG   + K 
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQ-SDEEYG---LVKA 111

Query: 121 TK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           T+    V IE+ S N   P+H+GH R  ++G+ LA+++A +G  V +   +ND G  I  
Sbjct: 112 TETSPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNRVVKTNIVNDRGIHICK 171

Query: 177 LALSVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPE 226
             L+  W+     Y N  + PE          G Y   + KH   ELA+     +     
Sbjct: 172 SMLA--WKK----YGN-GETPESTGKKGDHLVGDYYVSFDKHYKAELAELMEKGMTKEEA 224

Query: 227 EKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           E   P++++ + + ++K    D  ++AL   + + ++   D+ +R     +    D +  
Sbjct: 225 EAASPLMQE-AREMLVKWEAGDPEVRALWEMMNNWVYAGFDETYR----KMGVGFDKIYY 279

Query: 283 QGYVY-EGILPPPKSKTTQKCDMDRKQLLFRST-------MVGDDVD-RPLLKSDGSYTY 333
           +   Y EG     K K  +  +   K   F+         +  + +D + LL+ DG+  Y
Sbjct: 280 ESNTYLEG-----KEKVMEGLE---KGFFFKKEDGSVWVDLTAEGLDHKLLLRGDGTSVY 331

Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +   
Sbjct: 332 MTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVEL 391

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            +G   KM  R G  +    +++E                             VG  +++
Sbjct: 392 PEG---KMKSREGTVVDADDLMEEMVSTAKETSQELGKLDGLTQEEADDIARIVGLGALK 448

Query: 424 FMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IF 472
           + +L    RKN      E +DF+          N   ++QY YAR +S+ R+A +   + 
Sbjct: 449 YFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVLRKAAESGIVI 499

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           P+          IP   E    E  LI  +A++  V++ A     P  +A Y YDL   +
Sbjct: 500 PEQ---------IPAGIELSEKEEGLIQLVADFAAVVKQAGEDYSPSIIANYTYDLVKEY 550

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +           ++  N  + + R+ L   VA ++  G+ ++G+E P+ M
Sbjct: 551 NQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPSRM 597


>gi|323348256|gb|EGA82505.1| Msr1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 624

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 211/523 (40%), Gaps = 99/523 (18%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K +  +LA +          S E  +F   
Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I   +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L            +D  Q    S  +G  V   + KSDG+  Y   D+ 
Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432
            MS R G+ + L  ++DE    +++ M   +                          K+ 
Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+    DF          
Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIRADF---------- 552

Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            S  +  +L +L+  LA+YP V+  A   QEP  +  YL+ + 
Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVC 594


>gi|313906013|ref|ZP_07839366.1| arginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469126|gb|EFR64475.1| arginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 588

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 128/614 (20%), Positives = 249/614 (40%), Gaps = 100/614 (16%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           +KK     +  RP  C +     N AM   +  G  P+ IA  +V  +K     +SV   
Sbjct: 22  DKKYARVTISNRPDLCEY---QCNGAMAAKKEYGKAPIQIANEVVEGMKDSEVFESVEAV 78

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNL----IGKGTKVNIEFVSANPTGPMHVGH 140
             GFINL +S  YL   +  +  +G E   NL    + +   V I++   N   P+HVGH
Sbjct: 79  MPGFINLKVSSEYLGAYIDKM--AGDE---NLSVEPVSEPKTVVIDYGGPNVAKPLHVGH 133

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A++G+++  +    G  +  + ++ D G Q+  +   +  R  +  Y ++S   EG 
Sbjct: 134 LRSAIIGESIKRMGRRLGDHMIGDVHLGDWGLQMGLIITELQERKPELPYFDES--FEGE 191

Query: 201 YP-----------GVYLKHVGKELADK-YSSELLNFPEE-----KWLPIVKDYSVQAMMK 243
           YP            +Y    GK   D+ Y  + L    E     +    +  + +   + 
Sbjct: 192 YPEEAPFTISELEEIYPTASGKSKEDESYKEKALQATAELQAGRRGYRAIWKHIINVSVS 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            ++ + + L++  D++  E D     P     ++D + + G+ YE               
Sbjct: 252 DLKKNYQKLDVDFDLWNGESDAQPYIPP----MVDKMKKDGFAYE--------------- 292

Query: 304 MDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSD 359
            D+  L+       D  + P   +LKSDG+  Y   DLA   + + +   D ++YV+  D
Sbjct: 293 -DQGALIVDVAEETDQKEVPPCMILKSDGAALYTTTDLATIVQRRDDYKPDEILYVV--D 349

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDE 416
               +  ++    A        N+    L       +DG P K   R G  + L +++ +
Sbjct: 350 KRQEMHFIQTFRCARKTGLVDDNLKFSFLGFGTMNGKDGKPFKT--REGGVMRLENLIRD 407

Query: 417 VGSDSVRFMMLWR--------KNSELLDFDFCK---VKEQSKENPVF------------- 452
           +  +  + ++  R        K ++++     K   +  Q+ ++ VF             
Sbjct: 408 INEEMFKKIVENRSVKDTDAEKTAQIVGLSAIKYGDLSNQASKDYVFDVDRFTSFEGNTG 467

Query: 453 -YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ Y   R +SI  +    F +    L    +I    E    E +L++ LA Y   +  
Sbjct: 468 PYILYTIVRIKSIIGK----FAEAGGSLDGAKIIAPAGE---QEKKLMLQLARYNDALTG 520

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   + P++L  Y+Y+L++ F+  +     + ++   +   RKL+ +R  L+     ++ 
Sbjct: 521 AYADKAPHRLCSYIYELSNDFNSFY----HDNKILTEENEERKLSWLR--LLSLAQRVLE 574

Query: 572 SGLNIIGVESPNEM 585
             ++++G ++P  M
Sbjct: 575 DAIHVLGFDAPERM 588


>gi|289606518|emb|CBI61158.1| unnamed protein product [Sordaria macrospora]
          Length = 123

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 3/119 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
            FA     L   +   D    +E++    I +E PRD +HG LSTNAAM+L++P   +P 
Sbjct: 7   FFAHLERALDTLVARGDLPAGLERRA---ITVEPPRDTSHGDLSTNAAMVLAKPAKTNPR 63

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +AEL+VA +   P+V +  +AG GFINL L+ +  R  L++I  +G +YGR+  G  T
Sbjct: 64  ALAELLVAELAGLPEVAAASVAGPGFINLTLTDATWRGELTAIAEAGDDYGRSQAGAET 122


>gi|289617811|emb|CBI55676.1| unnamed protein product [Sordaria macrospora]
          Length = 698

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 129/582 (22%), Positives = 235/582 (40%), Gaps = 114/582 (19%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYLSPSYL-RKILSSIVVSGI 110
           R  G  P  +AE   A+    PD D +F      +  ++ ++  S L   ++  +   G 
Sbjct: 169 RVKGKKPNELAEEWAAKF---PDTDPLFSKPTVSQVHLSFFIKASPLVNAVIPLVHAKGA 225

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           + G+       ++ +EF S N   P H GH R  ++G  L++L A +G++V R  Y+ D 
Sbjct: 226 DKGQK------RIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWDVIRINYLGDW 279

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
              IN L   ++ R    +     +  +        K  G++++    +  L+    ++ 
Sbjct: 280 EDPINHL-FQLYVRINTEMTAEKEEFTK-------RKEAGEDVS-ALEANSLDEQARRYF 330

Query: 231 PIVKDYSVQAM--------MKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             + D    A+        + I+R  D    LNI  D +  E               D +
Sbjct: 331 KKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHFDEYSGESQVTE----------DAM 380

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTMV----GDDVDRPLL-KSDGSYTYF 334
              G + E           + C  D+  QL+  S ++    G  +++PL+ K DG+  Y 
Sbjct: 381 NEVGKLMED---------KKICKEDKGAQLIDFSELIPGKEGKRLEKPLVRKRDGTALYL 431

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D++    ++E+  FD MIYV+ S    ++++L  +   +  K        C+ +    
Sbjct: 432 TRDISELLGRHEKYHFDKMIYVVASAQDLHLRQLFKIIELLGYKDIADK---CQHINF-- 486

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-----------SELLDFDFCKV 442
            G+ + MS R G    L  ++ +V +D +  +M   +N           +++L      V
Sbjct: 487 -GLVLGMSTRKGTVKFLDDILRDV-ADKMHEVMKKNENKYSQIEDPLATADVLGISSVMV 544

Query: 443 KEQSKE---NPVF--------------YVQYAYARCRSIFRQA---KDIFPDLDFDLFPR 482
           ++ S +   N  F              Y+QYA+AR  SI R+A    +     D  L   
Sbjct: 545 QDMSGKRINNYTFNMETMTSFEGDTGPYLQYAHARLNSIRRKAGVSDEELATADLSLLT- 603

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    +TS + L  H+A +P V++N     EP  +  YL+ L       +   +  
Sbjct: 604 ---------ETSAINLCRHMAGWPDVVKNTLKTLEPTTVLTYLFKLTHALSSSYDQLQ-- 652

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                V  +  +L   RL L  AV +++ +G+ +IG+ SP E
Sbjct: 653 -----VVGSEPELMKARLALYTAVQTVLANGMRLIGL-SPVE 688


>gi|282881138|ref|ZP_06289825.1| arginine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304942|gb|EFA97015.1| arginine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 606

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 240/598 (40%), Gaps = 128/598 (21%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I EL+V      P V S F   KGF+NL ++      +L+ I     ++G   + + + 
Sbjct: 62  AIGELLVRDC---PAVAS-FNVVKGFLNLNIAKEAWVDLLNDIHADE-KFGEKPVTEDSP 116

Query: 123 -VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ 
Sbjct: 117 LVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA- 175

Query: 182 FWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            W+        + + PE          G Y   + KH   ELA   S  + +   ++   
Sbjct: 176 -WQKW-----GNGETPESSGKKGDHLIGDYYVAFDKHYRAELAALKSKYMADEGLDEETA 229

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K     A+MK  R    A+ ++         + +GD   +R +   +    +VY G  
Sbjct: 230 ENKAKEESALMKEAR----AMLVK---------WEQGDKE-VRTLWKKM--NSWVYAGFD 273

Query: 292 PPPKS-----------------KTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-K 326
              K+                    +  D   + L FR       + +  + +D+ LL +
Sbjct: 274 ETYKALGVGFDKIYYESETYLEGKAKVEDGLNRGLFFRKDDNSVWADLTKEGLDQKLLLR 333

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           SDG+  Y   D+   + +++    D MIYV+G++ + + + L  +   +  K  +     
Sbjct: 334 SDGTSVYMTQDIGTAEMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGK----- 388

Query: 386 CELVRLYRDGMPI---KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCK 441
            ELV      + +   KM  R G  +    ++ E+ +D+       RK S EL  FD   
Sbjct: 389 -ELVHFSYGMVELPNGKMKSREGTVVDADELITEMIADA-------RKTSDELGKFDDMS 440

Query: 442 VKEQ--------------------SKENPVF--------------YVQYAYARCRSIFRQ 467
            +E+                    +++N +F              ++QY YAR RSI R+
Sbjct: 441 EQEKQDIARIVGLGALKYFILKVDARKNMLFNPEESIDFNGNTGPFIQYTYARIRSIMRK 500

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A     D +    P+  +   +  +  E+ LI  L +Y  V+E A     P  +A Y Y+
Sbjct: 501 A-----DAEGIKLPQQ-LSTSAPMNDKEIALIQKLNDYRAVVEQAGTDYSPSGIANYCYE 554

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   F+  +           + AN+ +    RL L   VA  I + + ++G+E P  M
Sbjct: 555 LTKDFNQFYHD------YSILNANSEEEKTARLVLAANVAKTIKNAMQLLGIEVPERM 606


>gi|164663129|ref|XP_001732686.1| hypothetical protein MGL_0461 [Malassezia globosa CBS 7966]
 gi|159106589|gb|EDP45472.1| hypothetical protein MGL_0461 [Malassezia globosa CBS 7966]
          Length = 630

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 213/532 (40%), Gaps = 122/532 (22%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG N  GKG    +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+ D G
Sbjct: 151 YGSNYSGKGKLCLVEFSSPNIAKPFHAGHLRSTIIGAFLANLYEANGWDVKRLNYLGDWG 210

Query: 172 AQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLK---------HVGKELAD---K 216
            Q   LAL   WR    +Q L  N    P  +   VY++           G+++ D   +
Sbjct: 211 KQFGLLALG--WRRFGDEQKLQEN----PVQHLFDVYVEINKLASEEGGKGEQIHDEARE 264

Query: 217 YSSELLNFPEEKWLPI--VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +   + +  EE  L     +D S++      ++    LN+  D +  E    +     I 
Sbjct: 265 FFKGMEDGKEENLLEWERFRDLSIEKY----KETYARLNVHFDEYRGESKVRK---HHIE 317

Query: 275 DIIDNLARQGYVYE---GILPPPKSK-TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           D +  L    +V     G L    SK   +K  ++RK                    DG+
Sbjct: 318 DTLSKLRTMDFVSREENGALLADLSKFKLEKAVVERK--------------------DGT 357

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQ----I 381
             Y   D+   + +YE+  FD MIYV+ S      + + K LE +    ++K+++    I
Sbjct: 358 PLYLTRDIPEAEQRYEQYKFDKMIYVISSQQDLHCAQFFKILELLGHPWAQKESEGLLHI 417

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------DSVRFMMLW--RKN 431
           N            GM   MS R G  + L H++DE           + V++  L    + 
Sbjct: 418 NF-----------GMVQGMSTRKGTVVFLDHILDETKEQMHDVMRKNEVKYAQLEDPERT 466

Query: 432 SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCRSIFR-QAKD--I 471
           ++++     K+++ + +   N  F              Y+QY + R  S+ R  A+D  +
Sbjct: 467 ADIVGMTAIKIQDMAGKRINNYTFDWKRMFSFEGDTGPYLQYNHVRLCSMERMNAEDGLV 526

Query: 472 FP--DLDFDLF--PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            P  DLDF+     R  +P+        L+++  LA++P V+  A+   +   +  + + 
Sbjct: 527 LPKEDLDFETMRTERLQVPE-------ALEIVWLLAQWPDVVRTASRDHQASTIVTFCFK 579

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           L       W           V+   R   ++RL L      +++S L ++ V
Sbjct: 580 LTHAISSAWEK-------LIVKNQERDDALVRLWLYRCAKDVLSSALRLLTV 624


>gi|297829930|ref|XP_002882847.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328687|gb|EFH59106.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 579

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 125/569 (21%), Positives = 230/569 (40%), Gaps = 113/569 (19%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL +AE +V  +     V+S  +A  G++N+ +          +++++GIE     +   
Sbjct: 68  PLAVAEALVTNLPTCDMVESCSVAQPGYVNVSIE---------NMLINGIETWAPTLSVK 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDT+A ++ +S  EV R  ++ D G Q   L  +
Sbjct: 119 RAV-VDFSSPNIAKKMHVGHLRSTIIGDTIARMLEYSNVEVLRRNHVGDWGTQFGMLIEN 177

Query: 181 VFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--- 234
           +F ++     A+     D+   Y P             K+ ++ L+F  +    +V+   
Sbjct: 178 LFEKFPDSNSAMETAIEDIQSLYKPS----------KTKFDAD-LDFKRKAQQAVVRLQG 226

Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                  + Q + +I R D   +  +  + + E       P  I ++I+ L  +G V E 
Sbjct: 227 GDPVYHKTWQKLCEISRADYAEIYQRLRVELEEKGESFYKPY-IANMIEELNSKGLVEES 285

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLA--YFKCKY 345
                          D  +++F       D   P  L+KSDG +TY   DLA  +++   
Sbjct: 286 ---------------DGARVMFIK-----DFKNPCMLVKSDGGFTYDTTDLAALWYRLNE 325

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIK 399
           E+  + +IYV  +    +  R    A  V       E   +++ +   +V+   DG   +
Sbjct: 326 EKA-EWIIYVTDAGQQEHFDRFFKAARQVGWLPDNDETYPRVSHVKFGVVK-GEDGK--R 381

Query: 400 MSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRK 430
              R  + + L  ++DE                             +G  +V++  L   
Sbjct: 382 FRNRDREIVPLADLLDEAKTRSKAALIERAKEKEWTPEELDQTAEAIGYGAVKYADLMNN 441

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            S    F + K+  + K N   Y+ YA+AR  SI +++     D+D +L     +  +  
Sbjct: 442 ISTDYKFSYDKMLNE-KGNTAVYLLYAHARICSIIKKSG---KDID-ELKKTGKLALDH- 495

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
              +E  L +HL ++   +E A     P+ L  YLYDL+  +   +S+          Q 
Sbjct: 496 --ANERALGLHLLQFAETVEEACTKLLPHILCEYLYDLSEHYTKFYSN---------CQV 544

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           N       RL L  A A ++    +++G+
Sbjct: 545 NGSAEETSRLLLCEATAIVMRKCFHLLGI 573


>gi|282878825|ref|ZP_06287592.1| arginine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299033|gb|EFA91435.1| arginine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 606

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 112/590 (18%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I EL+V     D    + F   KGF+NL ++      +L+ +        + +  +   
Sbjct: 62  AIGELLVR----DCSAVAGFNVVKGFLNLNIAKEAWVGLLNDMHADEKFGEKPVTDQSPL 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+  
Sbjct: 118 VMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMQANGNKVVKTNIVNDRGIHICKSMLA-- 175

Query: 183 WRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELAD---------KYSSELLN 223
           W     L   + + PE          G Y   + KH   E+A+             E   
Sbjct: 176 W-----LKWGNGETPESSGKKGDHLIGDYYVAFDKHYRAEVAELKNKFMTDEGLDEEAAE 230

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDN 279
              ++  P++K+ + Q ++K  + D  ++AL   + + ++   D+ ++     +    D 
Sbjct: 231 NKAKEEAPLMKE-ARQMLVKWEQGDEEVRALWQKMNNWVYAGFDETYK----TLGVSFDK 285

Query: 280 LARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGS 330
           +  +   Y EG     K+K  +  +   K L FR       + +  + +D+ LL +SDG+
Sbjct: 286 IYYESDTYLEG-----KAKVEEGLE---KGLFFRKDDNSVWADLTQEGLDQKLLLRSDGT 337

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-EL 388
             Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  V     +
Sbjct: 338 SVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGM 397

Query: 389 VRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDEVGSDSVR 423
           V L       R+G  +              K S   G F  +     R +   VG  +++
Sbjct: 398 VELPNGKMKSREGTVVDADELIATMIDDARKTSDELGKFKDMSEEEKREIARVVGLGALK 457

Query: 424 FMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           + +L    RKN      E +DF+          N   ++QY YAR RSI R+A      L
Sbjct: 458 YFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSIMRKAAAEGMAL 508

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              L      P ++  +  E+ LI  + ++  VIE A     P  +A Y Y+L   F+  
Sbjct: 509 PAQL------PTDAPLNDKEIALIQKMNDFGAVIEQAATDYSPSGIANYCYELTKDFNQF 562

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           + A+ ++  + RL L + VA II +G+ ++G+E P  M
Sbjct: 563 YHD------YSILNADTQEEKLTRLVLANNVAKIIKNGMLLLGIEVPERM 606


>gi|46445865|ref|YP_007230.1| arginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627687|sp|Q6MEP4|SYR_PARUW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46399506|emb|CAF22955.1| probable arginyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 584

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 2/136 (1%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKI 101
           GH   N+AM L++ L  +P  +AE IV ++    P +  + IAG GFIN+  S  +L K 
Sbjct: 43  GHYQFNSAMKLAKLLKKNPRQVAEAIVNQLTDSLPPLSKIEIAGPGFINMTFSTDFLSKN 102

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L  I++    +G     K  K+ I+F S N    MHVGH R  V+GD+LA L  F G+ V
Sbjct: 103 LD-ILLRDAHFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHV 161

Query: 162 TREYYINDAGAQINTL 177
            R  ++ D G     L
Sbjct: 162 IRLNHLGDWGTAFGML 177



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 53/301 (17%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRL-EAVAAA 373
           G+++   + KSDG Y Y   D+A  Y +  +E+G D +IY+  +  + + + + +A   A
Sbjct: 305 GENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKG-DRLIYITDAGQATHFQMIFKAAEKA 363

Query: 374 VSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL---------------------- 410
                 QI V      + L  DG   K   R+G+   L                      
Sbjct: 364 KYLDTTQIRVDHVPFGLVLGTDGK--KFRTRSGETEKLIDLLRTAINCADKILSEKNPEM 421

Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSI 464
                RH+   +G  ++++  L    + + D+ F   +    E N   ++ YAY R   I
Sbjct: 422 EESERRHLAKSLGIGAIKYADL--SCNRVGDYTFSYDRMLRFEGNTAAFLMYAYVRIAGI 479

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+ K   P +         I  E    ++E++L +H+  +   +        P +L  Y
Sbjct: 480 KRRLKANLPAV----LENTHINLEH---STEIELGLHILRFHETLNLMANDLLPNRLTDY 532

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY LA  F+  +   R       V+   ++ T  RL L  A A ++  GL I+G+ + ++
Sbjct: 533 LYTLAEKFNAFFRDCR-------VEGTPQQNT--RLLLCEATAKVLKQGLTILGLTTVDK 583

Query: 585 M 585
           M
Sbjct: 584 M 584


>gi|28571570|ref|NP_649745.3| CG10092 [Drosophila melanogaster]
 gi|19528429|gb|AAL90329.1| RE18459p [Drosophila melanogaster]
 gi|28381174|gb|AAF54156.2| CG10092 [Drosophila melanogaster]
 gi|220948032|gb|ACL86559.1| CG10092-PA [synthetic construct]
          Length = 594

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 194/508 (38%), Gaps = 99/508 (19%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   L L     
Sbjct: 139 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHEHLGYRTTRLNYLGDWGTQFGLLVLG---- 194

Query: 185 YQQALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFPEE--------------- 227
                  N SD      P   +Y  +V    A +   E+     +               
Sbjct: 195 ---VQLLNVSDKEMQLSPIETLYKSYVAANKAAEQRPEIAQQARDLFAALEGGTDKSMAK 251

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           KW    ++Y+++ + K+       L +  D +  E  + +     I+D++D L       
Sbjct: 252 KWQQ-YRNYTIEDLSKVY----NRLGVHFDSYEWESQYSQ---QQIQDVLDKLRS----- 298

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
            G+L P                  R  +V D    P++KS+GS  Y A D+A    +  R
Sbjct: 299 AGLLQPEHDG--------------REIVVVDGRRIPVIKSNGSTLYLARDIAALLERLSR 344

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             F  ++YV+ +  + +   L    AA+ ++      L  E ++  + G    MS R G 
Sbjct: 345 FQFSRLLYVVDNGQADHFNALFKTTAALDDR------LSLEQLQHVKFGRIYGMSTRQGK 398

Query: 407 FITLRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVF 452
            I L+ V+DE   +  +        R+N  L D   C +           K++ + +  F
Sbjct: 399 AIFLKDVLDEARDIMREKRNISATTRENYNLDDEHVCDILGVSAVLVNVLKQRRQRDHEF 458

Query: 453 YVQYA------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQ 497
             Q A            Y  CR       D F D+D D    ++ P    F T     L 
Sbjct: 459 SWQQALQVNGDTGIKLQYTHCR--LHSLLDNFRDVDLD----DIKPDWKHFSTEPADALD 512

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LA + + +  +    E   L  YL+ L +      +  +   RL   Q ++ +  +
Sbjct: 513 LLYALARFDQSVWQSKEQLEACVLVNYLFGLCN------ATSQALKRLPVKQESSLEKQL 566

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L HA    +  G+ ++G+   N+M
Sbjct: 567 QRLLLFHAAKKTLRHGMELLGLRPLNQM 594


>gi|218249954|ref|YP_002375102.1| arginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321900|ref|ZP_03797426.1| arginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|218165142|gb|ACK75203.1| arginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226233089|gb|EEH31842.1| arginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 585

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 220/540 (40%), Gaps = 92/540 (17%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253
              Y K+  + E A+K   +LL   E+K       W  + K ++++     I++  +  N
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308
              D I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ
Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
                        + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L
Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFDFEEMIYVVGSEQIQHFKSL 358

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             VA  +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M  
Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQ 415

Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463
             +N E          L    +  +K    ++ VF              Y+QY  AR  S
Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475

Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           I  + K     +   +DF+L               E ++I  ++E    I NA     P 
Sbjct: 476 ILEKYKALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  Y Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|325002809|ref|ZP_08123921.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 570

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 129/593 (21%), Positives = 228/593 (38%), Gaps = 132/593 (22%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N A+ L++   + P  +A  +   +     + SV +AG GF+N+ +  + 
Sbjct: 20  RPSGRADFQANGALALAKHAEVPPRDLAAGLADEVSAADVIGSVELAGPGFLNITVPDAM 79

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   +++  +    +G     +G +  +++ + N    MHVGH R  ++GD L  ++ F 
Sbjct: 80  IWSQVAA-RLGDDRFGVAAPERGRRTVVDYSAPNIAKEMHVGHLRTTIIGDCLVRVLDFL 138

Query: 158 GYEVTREYYINDAGAQINTL-------------------------ALSVFWRYQQALYNN 192
           G +V R+ ++ D G Q   L                         AL   +R  +A +  
Sbjct: 139 GADVVRQNHLGDWGTQFGMLIQYLDEHPDTTWRLDDLDGNTSAVSALDGLYRNSRATFEA 198

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D+D  +     V     G        SE++   E+ +             + I D L  L
Sbjct: 199 DADFADRARRRVVALQSGDPATIAVWSEIVAESEKAF-------------RGIYDRLGVL 245

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            +  D  + E  ++      +   +D L     V +GI            D D   ++  
Sbjct: 246 -LTADDSVGESFYN----PLLTGTVDEL-----VADGI----------AVDSDDALVILS 285

Query: 313 STMVGDDVDR-PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLE 368
           + + G D +  PL+  K DG Y Y   DLA  + +  +   D ++YV  S  S + +   
Sbjct: 286 NEVDGPDGEPVPLMVRKRDGGYGYDTTDLATIRYRIRDLEADRLLYVTDSRQSLHFR--- 342

Query: 369 AVAAAVSEKKAQINVLLCELVR---------LYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  + A+    L E VR         L  DG P K   RAG  + L  ++D+  S
Sbjct: 343 -----LVFEAARRAGWLTEGVRAEHVPYGTVLGPDGRPFK--TRAGGTVRLMDLLDDAVS 395

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQS----------------------------KENPV 451
            +    ++  KN +L   +  ++ EQ+                              N  
Sbjct: 396 RA--RAVVAEKNPDLDPAELDRIAEQAGIGGVKYADLSTSRVKDYAFDVDRMVSFTGNTG 453

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYA+ R RSI R+A +            + +      D +E  L + L  Y  V+ +
Sbjct: 454 VYLQYAHTRIRSILRRAGE----------GSHAVDGGVALDGAERALALALDSYGEVLVD 503

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRL 560
            +++ EP++L  YLY+LA  F   +      G E+P    V+ N  +L + RL
Sbjct: 504 VSMSLEPHRLCGYLYELARAFTSFYEACPVLGSEDP----VRGN--RLALCRL 550


>gi|223888905|ref|ZP_03623496.1| arginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885721|gb|EEF56820.1| arginyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 585

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 217/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y    +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYTNNTIQMVNTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 262 IYLESEIFKIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 420

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E    I NA     P  L  Y
Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|117617648|ref|YP_858536.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117559055|gb|ABK36003.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 581

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 2/147 (1%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ ++R ++ AHG L+TN AM+L++P   +P  +A  I+  +     +  V IAG GFIN
Sbjct: 29  RVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAAAIIEHLPASDLIAKVEIAGPGFIN 88

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  PS+L   + ++V S     +  + +   V +++ + N    M V H R  V+GD  
Sbjct: 89  FFFDPSWLAGQVEAMVASANANVKLPVPQ--TVVVDYSAPNVAKEMAVHHIRSTVLGDVA 146

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177
           A  + F G++V R  +I D G Q   L
Sbjct: 147 ARALEFLGHKVVRANHIGDWGTQFGML 173



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV-------KRLEAVAAAVSEK 377
           KSDG + Y   D+A  K +YE  G D ++Y + S    ++       ++   V  +V  +
Sbjct: 310 KSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYVPESVPLE 369

Query: 378 KAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLRH----------VVDEVG 418
                ++L +  R Y  R G  +K+        +RA   +  R+          VV  + 
Sbjct: 370 HHAFGMMLGKDGRPYKTRSGGTVKLVELLNEAEERASALLESRNSDLSAEEKAQVVHAIA 429

Query: 419 SDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
             +V++  L +  +   + D+D     E    N   Y+QYAY R +SIFR+A      +D
Sbjct: 430 MGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYLQYAYTRIQSIFRKA-----GVD 481

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    +VI  E     +E  L   L ++   +        P+ L  YLY+L+  F   +
Sbjct: 482 ADTLSGHVILNEE----AEEVLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFY 537

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                N         +      RL L  A A ++  GL ++G+ +   M
Sbjct: 538 EACPINK-----DGVDEATRQSRLLLCAATAKVLKLGLGVLGIHTLERM 581


>gi|195445587|ref|XP_002070393.1| GK12028 [Drosophila willistoni]
 gi|194166478|gb|EDW81379.1| GK12028 [Drosophila willistoni]
          Length = 575

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 198/506 (39%), Gaps = 95/506 (18%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF S N   P HVGH R  ++G+ LA+L  + GY  TR  Y+ D G Q   +A+ V   
Sbjct: 120 VEFSSPNIAKPFHVGHLRSTIIGNVLANLHQYLGYSTTRLNYLGDWGTQFGLMAVGV--- 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHV--GKELAD-----KYSSELLNFPE--------EKW 229
             Q    +D ++       +Y  +V   K  AD     + + EL +  E        ++W
Sbjct: 177 --QLSNVSDEEMKASPIATLYKSYVMANKAAADDPTVAQRARELFSALEAGTDQTMAKQW 234

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
               + Y++  + ++     + L +  D +  E  + +     I  +++ L   G     
Sbjct: 235 HQ-YRQYTIAELKEVY----ERLGVHFDSYEWESQYSQKQ---ISKVLEQLRSAGL---- 282

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348
           +LP                   R  +V D+   P++KSDGS  Y A D+A    +Y+R  
Sbjct: 283 LLPEADG---------------RQIVVVDNRRIPVIKSDGSTLYLARDIAAILDRYKRLD 327

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           F  ++YV+ +  + +   L    AA+  K      L  E ++  + G    MS R G  I
Sbjct: 328 FSRLLYVVDNGQADHFNALFKTVAALDPK------LSLEHLKHVKFGRIHGMSTRQGKAI 381

Query: 409 TLRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFYV 454
            LR V+DE   V  +  +     + NS L D   C +           K++ + +  F  
Sbjct: 382 FLRDVLDEAKNVMREKRQLSATTKVNSSLDDDLVCDILGVSAVLVNVLKQRRQRDHEFNW 441

Query: 455 QYA------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLI 499
           Q A            Y  CR       D F  +  +     V P    F       L+++
Sbjct: 442 QQALQVNGDTGIKLQYTHCR--LYSLLDNFKHISLE----EVKPSWQHFIQEPIEALEVV 495

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA + + +  +    E   L  YL+ L +      +  R   RL   Q    +    R
Sbjct: 496 YELARFEQSVWQSKEQLEACILVNYLFGLCN------ATSRALKRLPIKQETCTQKQTQR 549

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A    ++ G+ ++G++  N+M
Sbjct: 550 LLLFRAAKQTLSKGMELLGLKPLNQM 575


>gi|159902746|ref|YP_001550090.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687135|sp|A9BDF0|SYR_PROM4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|159887922|gb|ABX08136.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 603

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 239/606 (39%), Gaps = 112/606 (18%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98
           G    N A+ LS+ L   P  IAE I+ ++  + D + +     IAG GFINL +  S L
Sbjct: 47  GDFQVNGALALSKILKKAPRKIAEEIIKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCL 106

Query: 99  RKILSSIVVS---GIEYGRNL-IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              + + +     G+   + L   K  K + ++F S N    MHVGH R  ++GD++A +
Sbjct: 107 TTEICARLNDDHLGVPIAKPLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARV 166

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHV 209
           + F G+ V R  ++ D G Q   L   +     +AL      N  DL + Y     L   
Sbjct: 167 LEFRGHPVLRLNHVGDWGTQFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDE 226

Query: 210 GKELADKYSSELLNF----PEE-KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +   D    E++      P+  K   ++ D S     KI +        + DI I+E  
Sbjct: 227 DETFQDASREEVVRLQNGDPQSLKAWQLLCDQSRIEFEKIYK--------RLDIHITE-- 276

Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             RG+      ++D+ID+L     +         +    KC       +F   + G D  
Sbjct: 277 --RGESFYNQYLQDVIDDLKSTNLLV--------TDNGAKC-------IFLDDITGKD-G 318

Query: 322 RPL----LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA- 371
           +PL     K+DG + Y   DLA  + + +      G   +IYV  +  + +   +  VA 
Sbjct: 319 KPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTDAGQASHFFAVFQVAR 378

Query: 372 -AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
            A       +I  +   LV+   DG   K+  R+GD + L+ ++DE              
Sbjct: 379 RANWIPNDCRIEHVPFGLVQ-GEDGK--KLKTRSGDTVRLKDLLDEAIIRAKNDLEERLN 435

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            +G  +V++  L +       F F ++    + N   Y+ YA  
Sbjct: 436 AEGRKEDQEFINKVSRVIGIAAVKYADLSQNRITNYQFSFNRMLA-LQGNTAPYLLYALV 494

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R   I R+   +   ++   F     PQ       E  L   L ++  VI        P 
Sbjct: 495 RIAGINRKGGSLNATINKLTFNE---PQ-------EWMLARELLKFDEVILQVEEELLPN 544

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L  YL++L+ VF+  +    + P L+     N  L   RL L    A  I  GL ++G+
Sbjct: 545 RLCNYLFELSQVFNRFYD---QVPVLK----ANDSLKASRLALCQLTADTIKLGLKLLGI 597

Query: 580 ESPNEM 585
            + + M
Sbjct: 598 PTLDRM 603


>gi|225568686|ref|ZP_03777711.1| hypothetical protein CLOHYLEM_04764 [Clostridium hylemonae DSM
           15053]
 gi|225162185|gb|EEG74804.1| hypothetical protein CLOHYLEM_04764 [Clostridium hylemonae DSM
           15053]
          Length = 594

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 123/598 (20%), Positives = 241/598 (40%), Gaps = 90/598 (15%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  IA  + A +     +        GFIN+ L  
Sbjct: 39  RPDLCEY---QCNGAMAGAKTYRKAPAVIASEVTANLAKSACIKEAEAVNPGFINIRLKE 95

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S++   L+ +       G +   +   + +++   N   P+HVGH R A++G++L  +  
Sbjct: 96  SFVADYLNGMNEDHA-LGLSRAEEPKMIIVDYGGPNVAKPLHVGHLRSAIIGESLKRIAR 154

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204
             G+EV  + ++ D G Q+  +   +  R  +  Y +DS   +G YP            +
Sbjct: 155 AMGHEVLGDIHLGDWGYQMGLIITELKSRRPELPYFDDS--FDGEYPEDAPFTISELEEI 212

Query: 205 YLKHVGKELADK-YSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           Y    G+   D+ Y  + LN         +    + ++ +   +  ++ + + L++  D+
Sbjct: 213 YPTASGRAKEDEAYREQALNATYLLQNGHRGYTAIWNHIMNVSVADLKKNYENLDVCFDL 272

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E D  +  P    D++  L  +GY +                MD   L+       D
Sbjct: 273 WKGEADAQKYIP----DMLRRLKEEGYAH----------------MDDGALVIDVQEETD 312

Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRL--EAVAA 372
             + P   + KSDG+  Y   DLA    + E    D +IYV+      +  ++   A  A
Sbjct: 313 TKEVPPCMIQKSDGASLYGTTDLATLVQREEDYHPDEIIYVVDKRQELHFVQIFRAAKKA 372

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +  ++ ++  L    +   +DG P K   R G  + L +++ E+  +  + +   R  S
Sbjct: 373 GIVPEETKLRFLGFGTMN-GKDGKPFKT--REGGVMRLENLIAEIEEEMYKKISDNRTVS 429

Query: 433 E-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQ 467
           E           +    +  +  Q+ ++ VF              Y+ Y   R +SI  +
Sbjct: 430 EENAARTAKTVGMSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSILNK 489

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            ++    L       + I  +     SE  L++  A Y  VI+ A     P+K+  Y+YD
Sbjct: 490 YEENGGTL-------SGIKMQGVCSESEKALMLEAARYSEVIQTAFEELAPHKICAYIYD 542

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA+VF+  +       ++   +  NRK + + L ++     ++ + ++++G E+P  M
Sbjct: 543 LANVFNRFYHE----TKILAQEDENRKSSCIALLVL--TKRVLEACIDLLGFEAPERM 594


>gi|325299512|ref|YP_004259429.1| Arginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319065|gb|ADY36956.1| Arginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 597

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 222/564 (39%), Gaps = 111/564 (19%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++      +L+ I        R    K   V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLTIASDVWIDLLNRIHADAQWGIRKADEKAPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------- 198
           +G+ LA++MA +G  V +   +ND G  I    L+  W     L   + + PE       
Sbjct: 141 LGNALANIMAANGNRVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSGKKGD 193

Query: 199 ---GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
              G Y   + KH   E+A     EL+    EK L   +  +   +M+  R+ L+     
Sbjct: 194 HLIGDYYVAFDKHYKAEVA-----ELM----EKGLSKEEAEAQSPLMQEAREMLRK---- 240

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT----- 298
                    +  GDP  +R + + +    +VY G     K            S T     
Sbjct: 241 ---------WEAGDPE-VRALWEKM--NNWVYAGFDETYKMMGVSFDKIYYESNTYLEGK 288

Query: 299 TQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGF 349
            +  +   K + +R       + +  + +D+ LL ++DG+  Y   D+   + ++ +   
Sbjct: 289 KKVLEGLEKGIFYRKEDGSVWADLTPEGLDQKLLLRADGTSVYMTQDIGTAEQRFADYPI 348

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI- 408
           D MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM  R G  + 
Sbjct: 349 DKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMKSREGTVVD 405

Query: 409 ----------TLRHVVDEVGS----------DSVRFMMLWRKNSELLDFDFCK-VKEQSK 447
                     T +   +E+G           D  R + L      +L  D  K +    K
Sbjct: 406 ADDLMEAMIQTAKETSNELGKLDGLTQEEADDIARIVGLGALKYFILKVDARKNMTFNPK 465

Query: 448 ENPVF------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           E+  F      ++QY YAR +SI R+A +        +    VIP   E    E  LI  
Sbjct: 466 ESIDFNGNTGPFIQYTYARIQSILRKAAEA------GITIPAVIPAGMELTAKEEGLIQM 519

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA++   ++ A     P  LA Y YDL   ++  +           ++  N  L + RL 
Sbjct: 520 LADFTATVDQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILREENEALKVFRLA 573

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L   V  I+   + ++G+E P  M
Sbjct: 574 LSQNVGKIVKEAMGLLGIEVPERM 597


>gi|216264482|ref|ZP_03436474.1| arginyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980955|gb|EEC21762.1| arginyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 585

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 219/540 (40%), Gaps = 92/540 (17%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253
              Y K+  + E A+K   +LL   E+K       W  + K ++++     I++  +  N
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308
              D I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ
Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
                        + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L
Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSL 358

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             VA  +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M  
Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQ 415

Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463
             +N E          L    +  +K    ++ VF              Y+QY  AR  S
Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475

Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           I  + K     +   +DF L               E ++I  ++E    I NA     P 
Sbjct: 476 ILEKYKALSIPVMEKIDFKLLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  Y Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|261749271|ref|YP_003256956.1| arginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497363|gb|ACX83813.1| arginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 586

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 116/542 (21%), Positives = 227/542 (41%), Gaps = 80/542 (14%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N     SY   +L +++     Y   L  K   + IE+ S N   P+H+GH R +++
Sbjct: 82  GFLNFIFKDSYYLYLLINMLNKNF-YDLKLSDKN--IMIEYSSPNANKPLHLGHIRNSLI 138

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP---G 203
           G +L+ ++   GY+ T+   IND G  I    ++  W+          +L +G  P   G
Sbjct: 139 GYSLSEILKMVGYKTTKIQIINDRGIHICKSMIA--WK----------ELGKGESPDRVG 186

Query: 204 VYLKH-VGK--ELADK-YSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +   H VGK   L DK Y  E+  F +     + ++PI+K  +   + K    D +  N+
Sbjct: 187 MKGDHFVGKYYNLFDKIYCEEIQKFSQKNKNNQNYIPILKK-TRNLLKKWESGDPETRNL 245

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
              +     D  +     +  I D +  +  VYE      K    +     +K       
Sbjct: 246 WKRMNKWVYDGFKETYKKLGIIFDQVEYESDVYEIGKNIIKEGFKKGIFFQKKDGSIWVD 305

Query: 315 MVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVA 371
           ++ +  D+ LL +SD +  Y   D+     ++ +    D +IY++G +   + K L  + 
Sbjct: 306 LIKEGFDQKLLLRSDETSVYITQDIGTAVERFRKYDDIDQLIYIVGKEQDYHFKVLFTIL 365

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVDE------------ 416
             +        + + +L  L    + +   +M  R G+ I    ++ E            
Sbjct: 366 KRLGY------IWVKKLTHLSYGMVDLPSGRMKSRKGNIIDADSLISEMSSIVKKNFLKD 419

Query: 417 ------------VGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                       +G  ++++  L       +L +    +  + K  P  Y+QYAY+R RS
Sbjct: 420 FPKEEQEKYAEIIGVGAIKYHFLQVDPKKRILFYPDKSIDLKGKTGP--YIQYAYSRIRS 477

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F  L    F        ++ +  E ++I  L +YP +++ +     P  +A 
Sbjct: 478 IERKF-TFFYSLTHKDF------SNAKLNIHEKKMIKILQKYPLILKKSARDLNPSLVAN 530

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+Y++A +F+  + + R    L  + +N      + + ++H   +I+ SG+N++G++  +
Sbjct: 531 YIYEVAKIFNHLYQNTRVINPLDIIHSN------ICMNIIHVTGNILKSGMNLLGIKMLD 584

Query: 584 EM 585
            M
Sbjct: 585 RM 586


>gi|220673255|emb|CAX12336.1| novel protein similar to vertebrate arginyl-tRNA synthetase-like
           (RARSL, zgc:63702) [Danio rerio]
 gi|220679527|emb|CAN88095.2| novel protein similar to vertebrate arginyl-tRNA synthetase-like
           (RARSL, zgc:63702) [Danio rerio]
          Length = 597

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 241/602 (40%), Gaps = 112/602 (18%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKIL 102
           HL  + A+   RP G D       +  +I+ D  V+ V I G+G I+  L+   L +K+L
Sbjct: 48  HLLQSGAV---RPDG-DLQNTTHTLARQIRTDAVVEEV-IPGRGVIHFRLNKLLLAQKLL 102

Query: 103 SSIVVSGIEYG-RNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
             +      +G ++ I +  +V    +EF S N     H GH R  ++G+ +A+L    G
Sbjct: 103 DQLRSDPDGFGVKSEILRRLRVGRTLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALG 162

Query: 159 YEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD-LPEG---------------Y 200
            EV R  Y+ D G Q   L  S F R+  Q+ L     + L E                 
Sbjct: 163 NEVIRVNYLGDWGMQFGLLG-SGFERFGSQEKLRTQPLEHLFESSVGGCCVFLYGSAVCV 221

Query: 201 YPGVYLKHVGKELADKYS--SELLNF------PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
            P VY++ V +E     S  S   +F       EE+ L + + +    + +  R   + L
Sbjct: 222 RPQVYVQ-VNREAESDASVRSAAAHFFRRLEQSEEQALELWRHFREITIHEYKR-IYQRL 279

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            ++ D + S + FHR +   + D + +           L     K T   D+  K     
Sbjct: 280 GVEFDHY-SGESFHRAETQTVLDELRSRR---------LLKTSQKGTGVVDLSDK----- 324

Query: 313 STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
               GD  +   L++SDG+  Y   D+A    + +R  FD MIYV     + + ++L  +
Sbjct: 325 ----GDMSNYATLVRSDGTSLYITRDVAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRI 380

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A+    A      C  V     G+   MS R G+ + L  V++E  S  +  M   R 
Sbjct: 381 LQAMGHPWAGS----CHHVAF---GLVQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRT 433

Query: 431 NSELLD---------------------------FDFCKVKEQSKENPVFYVQYAYARCRS 463
           + EL D                           F++ KV +   +  VF +QY +AR  S
Sbjct: 434 SKELEDPEVTAERIGISALIVQDFKGPLISDYRFEWDKVLQAQGDTGVF-LQYTHARLCS 492

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           + RQ        DF              D+  + L+ HL  Y  V+       +P  L  
Sbjct: 493 LLRQQDCEISCSDFSPLT----------DSRSVSLLQHLLRYDEVLLQCATDLQPKHLVN 542

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +L  L+   H   S  RE P    V+ ++  +   RL L  +V S++ +G+ I+G+   +
Sbjct: 543 FLMTLS---HLVASAHRELP----VKGSSEAVAQARLCLFSSVRSVLANGMRILGITPVD 595

Query: 584 EM 585
           +M
Sbjct: 596 KM 597


>gi|282859911|ref|ZP_06268999.1| arginine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587314|gb|EFB92531.1| arginine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 606

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 126/580 (21%), Positives = 236/580 (40%), Gaps = 134/580 (23%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN-IEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P+    +L+ I      +G   +   + +  +E+ S N   P+H+GH R  
Sbjct: 81  KGFLNLVIAPAAWVGLLNDINTDE-HFGEKAVTDNSPLAMVEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY----NNDSDLPEGY 200
           ++G +L+ +M  +GY+V +   +ND G  I    L+ + ++ + +         D   G 
Sbjct: 140 LLGWSLSQIMEANGYKVVKTNIVNDRGIHICKSMLA-WQKWGEGITPEKAGKKGDHLIGD 198

Query: 201 YPGVYLKHVG---KELADKYSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKAL 252
           +   + KH     KE+ DK+ +E L+  E     EK  P++++                 
Sbjct: 199 FYVAFDKHYRAELKEMTDKFMAEGLSEDEAKAKAEKESPLMQE----------------- 241

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT-- 298
              HD+ +    +   DP  +R + + +    +VY G     K            S T  
Sbjct: 242 --AHDMLVK---WEANDPD-VRALWEKM--NSWVYAGFDETYKALGVSFDKIYYESNTYL 293

Query: 299 --TQKCDMDRKQLLF----RSTMVGDDVD-----RPLLKSDGSYTYFAADLAYFKCKY-E 346
              +K +   ++ LF     +++  D  D     + LL++DG+  Y   D+   + ++ +
Sbjct: 294 VGKKKVEEGLEKGLFIRKDDNSVWADLTDEGLDQKLLLRADGTSVYMTQDIGTAQMRFAD 353

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              D MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM  R G 
Sbjct: 354 YPIDKMIYVVGNEQNYHFQVLSILLDRLGFRWGKDLVHFSYGMVELPNG---KMKSREGT 410

Query: 407 FI----------------------TLRHVVDE--------VGSDSVRFMML---WRKN-- 431
            +                       L  + +E        VG  ++++ +L    RKN  
Sbjct: 411 VVDADDLVASMIENAKTLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNML 470

Query: 432 ---SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVI 485
               E +DF+          N   ++QY YAR RSI R+A+    + P L  D  P N  
Sbjct: 471 FNPEESIDFN---------GNTGPFIQYTYARIRSILRKAEAQNIVLPTLLADDAPLN-- 519

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    E++L+  L ++   +  A I   P  +A Y Y+L   F+  +         
Sbjct: 520 -------EKEIELVQKLNDFGAAVAQAGIDYSPSGIANYCYELTKQFNQFYHD------Y 566

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + A+     + RL +   VA +I +G+ ++G+E P  M
Sbjct: 567 SILGADTEAEKITRLVIAKNVAKVIKNGMALLGIEVPERM 606


>gi|327402525|ref|YP_004343363.1| arginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318033|gb|AEA42525.1| arginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 631

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 133/624 (21%), Positives = 240/624 (38%), Gaps = 129/624 (20%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L +  G  P  I +++   ++ D    S +    GF+NL    +Y  + LS I  S   +
Sbjct: 46  LMKLAGKSPQEIGKVLGDFLRDDIRCISDYSIIGGFLNLSFPNNYWTQQLSEID-SNATF 104

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           G        ++ +E+ S N   P+H+GH R   +G ++A ++   G++V +   IND G 
Sbjct: 105 GSAEKNSKPEIMVEYSSPNTNKPLHLGHLRNNFLGYSVAQILDAYGHKVIKTQIINDRGI 164

Query: 173 QINTLALSVFWRYQQALYN-------NDSDLPEGYYPGVYLKHVGKE--------LADKY 217
            I    L+  W+    L         N++ L      G Y     K+        +A   
Sbjct: 165 HICKSMLA--WQKFSPLNEKGERENPNNTGLKGDKLVGKYYVEFDKQFNAEAKEIIAQWN 222

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +   FPE      V  Y      K+ +D+     +   I     +  + + S +R+  
Sbjct: 223 EGQFDGFPE----TTVLKYQEFTDAKVGKDEKAIAGLDDKI----KELAKNETSILREAK 274

Query: 278 DNLAR---------------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-------- 314
           D L R                 +VY+G      +KT +K  ++  +L + S         
Sbjct: 275 DLLVRWEGRDPEVYLLWTTMNSWVYDGF-----NKTYEKMGVEFDRLYYESDTFILGKDI 329

Query: 315 ---------------------MVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYE--RGFD 350
                                + G+ +D + LL+SDG+  Y   DL     ++       
Sbjct: 330 VNEGLKKGVLYKKEDSSVWIDLTGEGLDHKLLLRSDGTSVYMTQDLGTAVDRFNDYSELT 389

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-KMSKRAGDFIT 409
            +IY +G++   + K L  +   +    A+     C  +      +P  KM  R G  + 
Sbjct: 390 GIIYTVGNEQDYHFKVLFLILDKLGYSWAKS----CFHLSYGMVDLPSGKMKSREGTVVD 445

Query: 410 LRHVVDEV----------------GSDSVRFMMLWRKNSELLDFDFCKV--KEQSKENPV 451
              ++DE+                 S++ R ++        L +   KV  K++   NP 
Sbjct: 446 ADDLMDEIVQSAQEMTTERGHLDGMSETEREILYKTIGMGGLKYYLLKVDPKKRMMFNPA 505

Query: 452 F----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                      ++QYA+AR +S+  +A     D +            +E   SE ++I  
Sbjct: 506 ESIELNGNTGPFIQYAHARIQSLLGKATGFNLDTN------------TELGASEKEIIKQ 553

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA YP VIE+A     P  +A Y Y+L  +F+  + +      +  +   ++K   +RL 
Sbjct: 554 LALYPSVIEDAAKTYSPALVANYTYELVKLFNQFYQN------VMILSEEDQKQKAVRLT 607

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           +   VA +I S +N++G+  PN+M
Sbjct: 608 VCKNVAKVIKSSMNLLGISVPNKM 631


>gi|160884101|ref|ZP_02065104.1| hypothetical protein BACOVA_02077 [Bacteroides ovatus ATCC 8483]
 gi|156110443|gb|EDO12188.1| hypothetical protein BACOVA_02077 [Bacteroides ovatus ATCC 8483]
          Length = 605

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 130/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   +   
Sbjct: 56  PEQTAQEIGGYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           +  V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226
           +  W+     Y N  + PE          G Y   + KH     KEL  K++++ ++  E
Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDE 227

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     K  +   +M+  R+ L               +  GDP  +R + + +    +V
Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317
           Y G       +T +K  +   ++ + S                              +  
Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322

Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   + 
Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +  +  V     +    +G   KM  R G  +    +++E                   
Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           AR +S+ R+A +   + P+          IP   E    E  LI  +A++  V++ A   
Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGED 541

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P  +A Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N
Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595

Query: 576 IIGVESPNEM 585
           ++G+E P+ M
Sbjct: 596 LLGIEVPSRM 605


>gi|46124397|ref|XP_386752.1| hypothetical protein FG06576.1 [Gibberella zeae PH-1]
          Length = 635

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 245/605 (40%), Gaps = 124/605 (20%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG 113
           R  G  P  +AE   ++    P ++    +G  FI+ +     L   +L +I      YG
Sbjct: 78  RVKGKKPGELAEEWASKFPESPLIEKPTASGP-FISFFFKADKLTNMLLPTIRKQASSYG 136

Query: 114 RNLI-----------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           ++             GK  ++ +EF S N   P H GH R  ++G  +ASL   +G+EVT
Sbjct: 137 KSPYNGLRDPSDPNSGK-KRMIVEFSSPNIAKPFHAGHLRSTIIGGFIASLHESAGWEVT 195

Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS--- 218
           R  Y+ D G Q   LAL+   W  ++AL  +    P  +   +Y++ +  +++D+ S   
Sbjct: 196 RLNYLGDWGKQYGLLALAWEKWGDEEALKAD----PINHLFNLYVR-INSDMSDEKSKIK 250

Query: 219 -------------SELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQ 255
                        ++ L+    K+   + D   +A+        + I+R       LNI+
Sbjct: 251 EKQDAGEDVSALEADSLDEQARKYFRRMTDGDKEAVDLWRRFRDLSIVRYKKTYARLNIE 310

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           +D +  E      D     +I   LA +G                  D +   L+  S  
Sbjct: 311 YDEYCGESQVPEEDMKKAAEI---LAEKGLTE---------------DANGATLIDFSKH 352

Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369
           V    G  +++ +L K DG+  Y   D++    + E+  FD MIYV+ S    ++K+L  
Sbjct: 353 VAGKPGKSLEKVILRKKDGTALYLTRDISELLNRQEKYKFDKMIYVIASQQDLHLKQLFK 412

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               +  +     V  C+ +     GM + MS R G    L  ++ +V       M   R
Sbjct: 413 TIELMGHEDI---VKKCQHINF---GMVLGMSTRKGTVKFLDDILRDVAEKMHEVM---R 463

Query: 430 KN-------------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYA 459
           KN             +++L      V++ S +   N  F              Y+QYA+A
Sbjct: 464 KNETKYSQVENPEAVADILGISSVMVQDMSGKRINNYKFDMDVMTSFEGDTGPYLQYAHA 523

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SI R+      D        +++ ++   D     L+  L+++P V++N     EP 
Sbjct: 524 RLCSIRRKVN--LSDEQLATADYSLLKEKHATD-----LVRLLSQWPDVVQNTLKTLEPT 576

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YL+ +  V    + H      LR V + + +L   R+ L  A   ++ +G++++G+
Sbjct: 577 TILTYLFKMTHVLSSSYDH------LRIVGSED-ELQKARMGLYDAARIVLYNGMSLLGL 629

Query: 580 ESPNE 584
            SP E
Sbjct: 630 -SPVE 633


>gi|119511908|ref|ZP_01631006.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463404|gb|EAW44343.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 470

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 207/505 (40%), Gaps = 81/505 (16%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           ++F S N    MHVGH R  ++GD++A ++ F G++V R  ++ D G Q   L   +   
Sbjct: 3   VDFSSPNIAKEMHVGHLRSTILGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREV 62

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----DYSVQ 239
           Y +AL   ++ L  G     Y K      A +   E   F E     +V+     + ++ 
Sbjct: 63  YPEALTTANA-LDIGDLVSFYRK------AKQRFDEDEAFQETARQEVVRLQAGAEDTLH 115

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIR-DIIDNLARQGYVYEGILPPPKS 296
           A   +     +   I +D+ +      RG+   +P+   ++++LA+ G + E        
Sbjct: 116 AWKLLCEQSRREFQIIYDL-LDVQVIERGESFYNPLLPSVVEDLAKSGLLVEN------- 167

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVD-RPLL--KSDGSYTYFAADLAYFKCKYERG-FDNM 352
                      Q++F       + +  PL+  KSDG Y Y   DLA  + + ++     +
Sbjct: 168 --------QGAQVVFLEGFTNREGEPMPLIVQKSDGGYNYATTDLAALRYRIQQDEAKRI 219

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLR 411
           IYV  S  S +  +   VA      +  + ++     + L  DG   K   R+GD + LR
Sbjct: 220 IYVTDSGQSNHFAQFFQVARKAGWVRNDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLR 277

Query: 412 HVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
            ++DE                               VG  +V++  L +  +    F + 
Sbjct: 278 DLLDEAVIRARADLEARLKEEEREETEQFISEVAEIVGISAVKYADLSQNRTSDYIFSYD 337

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           K+ +  K N   Y+ YAYAR + I R+    F +L  ++    V+ Q      +EL L  
Sbjct: 338 KMLD-LKGNTAPYMLYAYARIQGISRKGGINFAELGENV---KVLLQHE----TELALAK 389

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           +L +   VI +      P +L  YLY+L+  F+  +     N  +R ++A    L   RL
Sbjct: 390 YLLQLDGVISSVEQELLPNRLCEYLYELSKKFNQFYDR---NQGVRVLEAEE-PLRTSRL 445

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L    A  +  GL+++G+     M
Sbjct: 446 VLCDLTARTLRLGLDLLGIRVLERM 470


>gi|260173135|ref|ZP_05759547.1| arginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315921410|ref|ZP_07917650.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695285|gb|EFS32120.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 605

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 131/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   +   
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLVQVTDA 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           +  V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226
           +  W+     Y N  + PE          G Y   + KH     KEL  K++++ ++  E
Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDE 227

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     K  S   +M+  R+ L               +  GDP  +R + + +    +V
Sbjct: 228 AK----AKAESESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317
           Y G       +T +K  +   ++ + S                              +  
Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322

Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   + 
Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +  +  V     +    +G   KM  R G  +    +++E                   
Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           AR +S+ R+A +   + P+          IP   E    E  LI  +A++  V++ A   
Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPTGIELSEKEEGLIQMVADFAAVVKQAGED 541

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P  +A Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N
Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595

Query: 576 IIGVESPNEM 585
           ++G+E P+ M
Sbjct: 596 LLGIEVPSRM 605


>gi|307566249|ref|ZP_07628695.1| arginine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345053|gb|EFN90444.1| arginine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 606

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 130/573 (22%), Positives = 232/573 (40%), Gaps = 120/573 (20%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL +S      +L+ I  S  ++G   I K +  V +E+ S N   P+H+GH R  
Sbjct: 81  KGFLNLVISSKAWISLLNDIS-SKDKFGEKEITKESPLVMVEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG- 203
           ++G +LA +M  +G +V +   +ND G  I    L+ + ++   +   +S     +  G 
Sbjct: 140 LLGWSLARIMEANGNKVIKTNIVNDRGIHICKSMLA-WLKWGNGITPEESGKKGDHLIGD 198

Query: 204 ---VYLKHVGKEL--------ADKYSSELLNFPEEKWLPIVKDY---------------S 237
               + KH   EL        AD  S E      EK  P++K+                S
Sbjct: 199 FYVAFDKHYRMELKELTEKFLADGLSEEEAKLRAEKESPLMKEAHEMLVKWEANDPEVRS 258

Query: 238 VQAMMKI-----IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + A M         +  KAL +  D    E + +             LA +  V EG+  
Sbjct: 259 LWAKMNSWVYAGFDETYKALGVSFDKIYYESNTY-------------LAGKKKVEEGL-- 303

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFD 350
             K    +K D         + +  + +D+ LL ++DG+  Y   D+   + ++ +   D
Sbjct: 304 -AKGLFIRKDDNS-----VWADLTNEGLDQKLLLRADGTSVYMTQDIGTAQMRFTDYPID 357

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-- 408
            MIYV+G++ + + + L  +   +  K  +  V     +    +G   KM  R G  +  
Sbjct: 358 KMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVDA 414

Query: 409 --------------------TLRHVVDE--------VGSDSVRFMML---WRKN-----S 432
                                L  + +E        VG  ++++ +L    RKN      
Sbjct: 415 DDLIESMIANAKKLSEDKVNKLEGITEEEKNEIARIVGLGALKYFILKVDARKNMLFNPE 474

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           E +DF+          N   ++QY YAR RSI R+A+     +     P+ ++  +S  +
Sbjct: 475 ESIDFN---------GNTGPFIQYTYARIRSILRKAEAQHISI-----PK-MLSDKSPLN 519

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E+ L+  L E+   +  A +   P  +A Y Y+L   F+  +           + A+ 
Sbjct: 520 EKEIALVQKLNEFGSTVAQAGVDYSPSGIANYCYELTKEFNQFYHD------YSILGADT 573

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + RL + + VA II +G++++G+E P  M
Sbjct: 574 DAEKITRLVIANNVAKIIKNGMSLLGIEVPERM 606


>gi|126310309|ref|XP_001366951.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 578

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 136/598 (22%), Positives = 243/598 (40%), Gaps = 121/598 (20%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           +C++GH         S+P   D    A  +  ++K D  V  +   G G +N  ++   L
Sbjct: 51  ECSNGH---------SKP---DIQVQARRLAEKLKCDTVVSEI-STGPGTVNFKINRELL 97

Query: 99  RK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            K +L  +   GI YG ++ +  G    KV +EF S N     HVGH R  ++G+ +A+L
Sbjct: 98  TKTVLQQVFEDGINYGLKSELFSGLPQKKVVVEFSSPNVAKKFHVGHLRSTIIGNFIANL 157

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
               G++VTR  Y  D G Q   L      + Y++ L +N    P  +   VY++ V KE
Sbjct: 158 KEALGHQVTRINYFGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKE 212

Query: 213 LADKYSSE--------LLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            AD  + E         L   +++ L +    +D S++  ++I     K L +  D + S
Sbjct: 213 AADDENVEKSAREFFHQLEAGDKQALSLWQKFRDLSIKEYVQI----YKRLGVHFDEY-S 267

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-DV 320
            + F+R     +  ++D         +G+L   K K T   D+  K         GD  +
Sbjct: 268 GESFYREKSREVLRLLDK--------KGLLQRTK-KGTAVIDLSGK---------GDPSL 309

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              +++S+G+  Y   DLA    +  +  FD+MIYV       + +++  +   +  + A
Sbjct: 310 SCTVMRSNGTSLYATRDLAAAIDRMNKYNFDSMIYVTDKGQQNHFQQVFQILKLMGFEWA 369

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--- 436
                  E  R    G+   M  R GD   L  V++E     +  M   + + EL +   
Sbjct: 370 -------ERCRHIPFGVVQGMKTRRGDVTFLEDVINETRLRMLENMAFSKTSKELENPHE 422

Query: 437 ------------------------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
                                   F++ +V  QS+ +   ++QY +AR  S+        
Sbjct: 423 TAERVGLAALIIQDFKGHLLSDYKFNWDRVF-QSRGDTGVFLQYTHARLSSL-------- 473

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA--- 529
            +  F+      I      D   + ++ HL  Y  V+  ++   +P  +  YL  L+   
Sbjct: 474 -EETFECGHLRNINATCLQDPQSISILQHLLRYDEVLFKSSQDLQPRHIVSYLITLSHLT 532

Query: 530 SVFHGHWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +V H            + +Q   R  ++   RL L  AV S++ +G+ ++G+   + M
Sbjct: 533 AVAH------------KTLQIKGRLPEVAEARLHLFKAVRSVLANGMKLLGITPVSRM 578


>gi|116515092|ref|YP_802721.1| hypothetical protein BCc_152 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285512|sp|Q057S1|SYR_BUCCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116256946|gb|ABJ90628.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 571

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 119/547 (21%), Positives = 231/547 (42%), Gaps = 96/547 (17%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL---IGKGTKVNIEFVSANPTGPMHVG 139
           I+  GFIN+ L  +++   ++++ ++     +N      K  K+ I++ S N    MHVG
Sbjct: 77  ISKPGFINITLDSNWICTNINNMFIA-----KNFNISFKKPKKIIIDYSSPNIAKEMHVG 131

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R  ++GDT A ++ F G+ V ++ +I D G Q   L   +    + +           
Sbjct: 132 HLRSTILGDTTARILKFLGHNVIKQNHIGDWGIQFGMLITQLKLESKISF---------- 181

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL-----NI 254
                      K +   Y    LN+ +    PI    + + ++K+ + D K +      +
Sbjct: 182 -----------KNIEKIYKKSYLNYKKN---PIFFKKTKKNVVKLQKKDKKCIYIWKKIV 227

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT----QKCDMDRKQLL 310
           +  I  +   + + + S  +  I   +   ++  GI+   K K      Q C +    L 
Sbjct: 228 KKSIKKNNKVYKKLNVSLKKKDIRGESFYNFMLPGIISDLKKKKIAVNYQGCVIV--YLK 285

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
                +G  +   + K DG++ Y   D+A   ++CK  +  D +IY + +    ++ ++ 
Sbjct: 286 NFKNRLGKKMGVVIQKKDGAFLYTTTDIACLKYRCKTLKA-DRIIYYIDNRQKQHLLQIW 344

Query: 369 AVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416
            +A  A    KK  +      ++ L+++  P K   R GD I L  ++++          
Sbjct: 345 NIAKKAKYFTKKILLEHHSFGMI-LHKNKKPFKT--RNGDTIKLIKLLNKGVTKAKEKIK 401

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAY 458
                            +G  ++++  L +K    LD+ F   K  S E N   Y+QYAY
Sbjct: 402 KKNRKIKKKELKKIAHNIGIGAIKYFDLSKKRK--LDYIFDWDKMLSLEGNTAPYIQYAY 459

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R +SI ++   IF +   D +  N+      F + E QLI  + ++  +I        P
Sbjct: 460 IRIKSIIKKNTTIFQN---DKYKINI------FTSFERQLIFSIFQFEEIIHILEKKGTP 510

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + +  YLYDL+    G +S   EN  +  + A  + + + R++L    + II   L  +G
Sbjct: 511 HLMCNYLYDLS----GKFSKFYENCSI--LNAKEKHIKISRIKLSILTSKIIKKCLYFLG 564

Query: 579 VESPNEM 585
           +++ ++M
Sbjct: 565 IKTVSKM 571


>gi|125550952|gb|EAY96661.1| hypothetical protein OsI_18575 [Oryza sativa Indica Group]
          Length = 606

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 127/583 (21%), Positives = 232/583 (39%), Gaps = 96/583 (16%)

Query: 48  NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  + SR  G      +P  I + I   +     ++S  +AG GF+N+ LS S++ K +
Sbjct: 63  NAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRI 122

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++V+GI+    ++     V ++F S N    MHVGH R  ++GDTLA +  FS  EV 
Sbjct: 123 QGMLVNGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVL 181

Query: 163 REYYINDAGAQINTLALSVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           R  ++ D G Q   L   +F +   +++       DL   Y           E  D+   
Sbjct: 182 RRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQ 241

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +  L   EE++       +   + +I R++   +    ++ + E      +P  I  ++
Sbjct: 242 AVVRLQGGEERYRA-----AWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPF-IPQVL 295

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           + L  +G + E                +  +++F   + G  +   ++K DG + Y + D
Sbjct: 296 EELNNKGLIKES---------------EGAKVIF---IEGHQIPLIVVKRDGGFNYASTD 337

Query: 338 LA--YFKCKYERGFDNMIYVMGSDHSGY------VKRLEAVAAAVSEKK-AQINVLLCEL 388
           LA  +++   E+  + +IYV       +        R+        EKK  + N +   L
Sbjct: 338 LAALWYRLNVEKA-EWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGL 396

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMMLWRKNSELLDFDFCKVKEQS- 446
           V L  DG   +   R+ + + L  ++DE  S S    +    +N +++D+   ++++ S 
Sbjct: 397 V-LGSDGK--RFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSE 453

Query: 447 ------------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                                         K N   Y+QYA+AR  SI R++     +L 
Sbjct: 454 AVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELK 513

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                    P E         L ++L  +  V+E A     P  L  YLY+L+ +F   +
Sbjct: 514 MSGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFY 566

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++          Q         RL L  A A ++     ++G+
Sbjct: 567 TN---------CQVVGSPEETSRLLLCQATAVVMRQCFELLGI 600


>gi|225552118|ref|ZP_03773058.1| arginyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371116|gb|EEH00546.1| arginyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 585

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 219/540 (40%), Gaps = 92/540 (17%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253
              Y K+  + E A+K   +LL   E+K       W  + K ++++     I++  +  N
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308
              D I++  + F  G     ++++     +G+ Y+     I     S + +  D   KQ
Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDENADTKVKQ 311

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
                        + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L
Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSL 358

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             VA  +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M  
Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLLDG---KMKSREGNVIDADNLISNLIESIMPEMTQ 415

Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463
             +N E          L    +  +K    ++ VF              Y+QY  AR  S
Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475

Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           I  + K     +   +DF+L               E ++I  ++E    I NA     P 
Sbjct: 476 ILEKYKALSIPVMEKIDFELLKH----------EKEWEIIKIISELGENIINAAKDLNPS 525

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  Y Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|60683639|ref|YP_213783.1| arginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313314|sp|Q5L7Q8|SYR_BACFN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|60495073|emb|CAH09892.1| putative arginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 597

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 128/582 (21%), Positives = 240/582 (41%), Gaps = 97/582 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG     + 
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHTDA-QYGIVSADEN 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L
Sbjct: 115 APLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD-----------KYSSELLNF 224
           + + +Y +      S    D   G Y   + KH   E+A+           + +S L+N 
Sbjct: 175 A-WQKYGKGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNE 233

Query: 225 PEE---KWLPIVKDYSVQAMMKIIR--------DDLKALNIQHD-IFISEDDFHRGDPSP 272
             E   KW     D  V+A+ +++         +  + + +  D I+   + +  G    
Sbjct: 234 AREMLVKWE--AGDPEVRALWQMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEGKEKV 291

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +  +      +G+ ++      K   +   D+         T  G D  + LL+ DG+  
Sbjct: 292 MEGL-----EKGFFFK------KEDGSVWADL---------TAEGLD-HKLLLRGDGTSV 330

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQIN-----VL 384
           Y   D+   K ++ +   D MIYV+G++ + + + L  +         K+ ++     V 
Sbjct: 331 YMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVE 390

Query: 385 LCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEVGS----------DSVRFMMLWRKNSE 433
           L E     R+G  +       + I T +    E+G           D  R + L      
Sbjct: 391 LPEGKMKSREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYF 450

Query: 434 LLDFDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483
           +L  D  K +    KE+  F      ++QY YAR RS+ R+A +   + P+         
Sbjct: 451 ILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVIPE--------- 501

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V+P   E    E  LI  +A++  V+  A     P  +A Y+YDL   ++  +       
Sbjct: 502 VLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD----- 556

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++  N  + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 557 -FSILREENEDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|189191868|ref|XP_001932273.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973879|gb|EDU41378.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 646

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 134/564 (23%), Positives = 217/564 (38%), Gaps = 94/564 (16%)

Query: 89  INLYLSPSYLRKILSSIVV-SGIEYGRNL---------IGKGTKVNI-EFVSANPTGPMH 137
           I  +  P  L  ++  +V+ S  +YG N             G K  I EF S N   P H
Sbjct: 107 IGFFFKPETLTSLVVPMVIKSKDDYGFNKNFGLKNPVDPSSGAKTMIVEFSSPNIAKPFH 166

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL- 196
            GH R  ++G  LA++   +G++V R  Y+ D G Q   LA+         LY N+ +L 
Sbjct: 167 AGHLRSTIIGGFLANIYERAGWDVVRMNYLGDWGKQYGVLAIGF------DLYGNEEELV 220

Query: 197 --PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
             P G+   +Y+K     H   E       E     EE      KD S Q   KI + + 
Sbjct: 221 KNPIGHLYDIYVKVSNVQHQEAEEMKALKEEAAKLKEEG-----KDASEQEN-KIKKIEA 274

Query: 250 KALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + ++ Q   +        G+P  +      RD+     +Q Y    I     S  +Q  D
Sbjct: 275 EGIDEQARKYFK--GMVDGEPKALGIWKRFRDLSIEKYKQTYARLNIHYDDYSGESQVKD 332

Query: 304 --MDRKQLLFRSTMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKY 345
             M+    +     V  D +  ++                K DG+  Y   D+     + 
Sbjct: 333 ESMELAAKIMWEKGVCQDSEGAVIVDLTPHSKKLGKAVIKKKDGTSLYLTRDIGAAIERV 392

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV--------------LL 385
           E+  FD MIYV+ S    ++ +L  +        +SEK   IN                L
Sbjct: 393 EKYHFDKMIYVVASQQDLHLAQLFKIEELMGRKDISEKCQHINFGMVLGMSTRKGTAKFL 452

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +++R   D M   M      +  +R      D +G  +V    +  K      FD  ++
Sbjct: 453 DDILRDVGDKMHEVMRTNETKYAQVRDPEKTADTLGISAVMVQDMKGKRINNYTFDMDRM 512

Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIV 500
              +    P  Y+QYA+AR  SI+R+A D    L+  DL     +    E     ++L+ 
Sbjct: 513 TSFEGDTGP--YLQYAHARLCSIYRKAVDADRSLEEIDLASAADLSLLKE--DKAVELVR 568

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            LA +P    N    QEP  +  YL+ +A      + H +       V  + + + + RL
Sbjct: 569 QLASWPDTFVNTLKTQEPTTVLTYLFKMAHALSSSYDHLQ-------VVGSEKNVLVARL 621

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L  A   ++ +G+ ++G+ SP E
Sbjct: 622 ALYVAARQVLYNGMKVLGL-SPVE 644


>gi|53715701|ref|YP_101693.1| arginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|265767354|ref|ZP_06095020.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81380963|sp|Q64MX8|SYR_BACFR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52218566|dbj|BAD51159.1| arginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|263252659|gb|EEZ24171.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 597

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 128/582 (21%), Positives = 240/582 (41%), Gaps = 97/582 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG     + 
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHADA-QYGIVSADEN 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L
Sbjct: 115 APLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD-----------KYSSELLNF 224
           + + +Y +      S    D   G Y   + KH   E+A+           + +S L+N 
Sbjct: 175 A-WQKYGKGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNE 233

Query: 225 PEE---KWLPIVKDYSVQAMMKIIR--------DDLKALNIQHD-IFISEDDFHRGDPSP 272
             E   KW     D  V+A+ +++         +  + + +  D I+   + +  G    
Sbjct: 234 AREMLVKWE--AGDPEVRALWQMMNNWVYTGFDETYRKMGVGFDKIYYESNTYLEGKEKV 291

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +  +      +G+ ++      K   +   D+         T  G D  + LL+ DG+  
Sbjct: 292 MEGL-----EKGFFFK------KEDGSVWADL---------TAEGLD-HKLLLRGDGTSV 330

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQIN-----VL 384
           Y   D+   K ++ +   D MIYV+G++ + + + L  +         K+ ++     V 
Sbjct: 331 YMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVE 390

Query: 385 LCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEVGS----------DSVRFMMLWRKNSE 433
           L E     R+G  +       + I T +    E+G           D  R + L      
Sbjct: 391 LPEGKMKSREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYF 450

Query: 434 LLDFDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483
           +L  D  K +    KE+  F      ++QY YAR RS+ R+A +   + P+         
Sbjct: 451 ILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVIPE--------- 501

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V+P   E    E  LI  +A++  V+  A     P  +A Y+YDL   ++  +       
Sbjct: 502 VLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD----- 556

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++  N  + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 557 -FSILREENEDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|86141177|ref|ZP_01059723.1| arginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831736|gb|EAQ50191.1| arginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 609

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 149/636 (23%), Positives = 248/636 (38%), Gaps = 102/636 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S +L N +K  D   ++    L+ + ++  R    G L+     IL    G +P  I 
Sbjct: 20  NLSEKLTNAVK--DAVQELFSASLETVEVQPTRKDFEGDLTVVVFPILRVAKG-NPAVIG 76

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I   +K + D  S F   KGF+NL ++ +Y       I    + +G      G  V +
Sbjct: 77  EQIGTYVKENLDEISDFNVVKGFLNLVIADAYYLNFFDGIR-DQMNFGHEPEA-GKAVMV 134

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFW 183
           E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I  + LA   F 
Sbjct: 135 EYSSPNTNKPLHLGHIRNNLLGYSVAEILKASGKKVYKTQIINDRGIHICKSMLAWQKFG 194

Query: 184 RYQ--QALYNNDSDLPEGYY---------PGVYLKHVG--KELADKYSSELLNFPE--EK 228
             +  ++       L   YY            YL   G  KE A+K +  +L   +   K
Sbjct: 195 EGETPESTGLKGDKLVGNYYVKFDKAYKEEQSYLVAQGKTKEEAEKEAPLILEAQDMLRK 254

Query: 229 WLPIVKDYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           W     D  V A+ + +         +  K L +  D +  E + +       +D I+  
Sbjct: 255 WE--AGDEEVVALWEKMNGWVYEGFEETYKNLGVDFDSYYYESNTYLLG----KDNIEEG 308

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADL- 338
            ++G  Y+      K   +  CD+             D +D  L L+SDG+  Y   D+ 
Sbjct: 309 LKKGVFYK------KGDGSVWCDLTE-----------DGLDEKLVLRSDGTAVYMTQDIG 351

Query: 339 -AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
            A  + K       MIY +G++   + K L  +   +    A+    L  L     D   
Sbjct: 352 TAIQRVKDHPDVGGMIYTVGNEQDYHFKVLFLILKKLGYDWAE---HLFHLSYGMVDLPS 408

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--------NSEL--------LDFDFCK 441
            KM  R G  +    +V+E+ + +        K          EL        L +   K
Sbjct: 409 GKMKSREGTVVDADDLVEEMATTAGNIAQELGKLDGYSEAEKQELYKIIGLGALKYYILK 468

Query: 442 VK---------EQS---KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           V          E+S   + N   ++QY YAR +SI R+A +     D+      + P+E 
Sbjct: 469 VDPKKRILFNPEESVDFQGNTGPFIQYTYARIQSILRKAAETGVAEDYAY--EALQPKEK 526

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           E       LI  LA YP  ++ A     P  +A Y YDL   F+  +       ++  + 
Sbjct: 527 E-------LIKQLALYPETVQLAAENHSPALIANYTYDLVKEFNSFYQ------QVSILG 573

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+       R+ L   V  +I +   ++G++ P  M
Sbjct: 574 ADTDAEKSFRVALSKKVGEVIEAAFGLLGIQVPERM 609


>gi|197303752|ref|ZP_03168789.1| hypothetical protein RUMLAC_02482 [Ruminococcus lactaris ATCC
           29176]
 gi|197297272|gb|EDY31835.1| hypothetical protein RUMLAC_02482 [Ruminococcus lactaris ATCC
           29176]
          Length = 591

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 120/603 (19%), Positives = 240/603 (39%), Gaps = 85/603 (14%)

Query: 29  LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           L R+ +  RP  C +     N AM  ++     P+ IAE +VA +              G
Sbjct: 28  LARVTLSNRPDLCEY---QCNGAMAGAKKYKKAPIMIAEDVVANLAESQCFAQAEAVKPG 84

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FINL L P ++ + L+ +       G     +   V I++   N   P+HVGH R A++G
Sbjct: 85  FINLKLKPEFVAEYLNEMAADE-NLGVEKEAEPKTVMIDYGGPNVAKPLHVGHLRSAIIG 143

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGV 204
           +++  ++ + G +VT + ++ D G Q+  +   +  R     Y ++S   + PE     +
Sbjct: 144 ESIKRIIRYKGNKVTGDIHLGDWGYQMGLIITELKKRQPDLPYFDESFGGEYPEEAPFTI 203

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPI------VKDYSV--QAMMKIIRDDLKA----L 252
                    A  Y+ E  ++ EE            K Y    + +M +   DLK     L
Sbjct: 204 SELEEIYPTASAYAKEHEDYREEALHATYLLQNGYKGYRAIWKHIMNVSVTDLKKNYERL 263

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           N++ D++  E D  +  P     +++ L  +G+ +                 D+  L+  
Sbjct: 264 NVEFDLWKGEADAQKYIPG----MVEMLKEKGFAH----------------YDQGALVVD 303

Query: 313 STMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLE 368
                D+ + P   +LKSDG+  Y   DLA    + E    D +IYV+      +  ++ 
Sbjct: 304 VAEETDNKEVPPCMILKSDGAALYDTTDLATLVEREELYQPDEVIYVVDKRQELHFIQVF 363

Query: 369 AVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             A      + +  +       +  +DG P K   R G  + L +++ E+  +  + +M 
Sbjct: 364 RCAKKTGIVRPETELKFLGFGTMNGKDGKPFKT--REGGVMRLENLIREIDEEMYKKIMD 421

Query: 428 WRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCR 462
            R   E           L    +  +  Q+ ++ +F              Y+ Y   R +
Sbjct: 422 NRTVEEADARKTAAEVGLAAIKYGDLSNQASKDYIFDVDRFTSFEGNTGPYILYTIVRIK 481

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI ++    + +   +     ++  E   + +E  L++ + ++  VI+       P+KL 
Sbjct: 482 SILKK----YAENGGNAEGAKILAAE---NAAEKALMLQVLKFNEVIDTVYAETAPHKLC 534

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+YDLA+ F+  +         + +   +       + L++    ++ + ++++G  +P
Sbjct: 535 AYIYDLANEFNKFYHE------TKILSEEDEAKKSGYIALLNLAKKVLETCIDLLGFTAP 588

Query: 583 NEM 585
             M
Sbjct: 589 ERM 591


>gi|194745067|ref|XP_001955014.1| GF16459 [Drosophila ananassae]
 gi|190628051|gb|EDV43575.1| GF16459 [Drosophila ananassae]
          Length = 666

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 136/610 (22%), Positives = 244/610 (40%), Gaps = 137/610 (22%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM L++ L   G++  P  IA  I     + P ++ + +AG GF+N++LS +Y
Sbjct: 117 GDYQCNNAMKLAKQLKEKGINKSPGDIATEIQRNCPVSPLIEKLEVAGAGFVNVFLSKNY 176

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             + LS ++ +G+   +       +V I+F S N    MHVGH R  ++G+++  L+ F 
Sbjct: 177 ASQALSGLLRNGV---KPPPVPKRRVLIDFSSPNIAKQMHVGHLRSTIIGESICRLLEFL 233

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
            ++V R  ++ D G Q   L                    L VF++  +  ++ D +  +
Sbjct: 234 QHDVVRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGDLQVFYKESKKRFDEDEEFKK 293

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V     G+  + K            W         Q +  + R + + +  + D+
Sbjct: 294 RAYSRVVSLQSGEPNSIK-----------AW---------QLICDVSRKEFQTIYNRLDV 333

Query: 259 FISEDDFHRGDP---SPIRDIIDNLARQGYVY--EG--ILPPPKSKTTQKCDMDRKQLLF 311
            I E    RG+    S +  +++ L ++  +   EG  I+ P +SKT             
Sbjct: 334 SIQE----RGESFYQSRMLSVVEFLRKKNLLEPDEGREIMWPDESKT------------- 376

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV 370
                   +   ++KSDG +TY  +D+A  + +  E     +IYV+ +  S +   +   
Sbjct: 377 -------GIPLTIVKSDGGFTYDTSDMAAIRHRLEEEKCSWIIYVVDAGQSTHFNTIFKA 429

Query: 371 A--------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           A        A       Q  V+L E      DG   K   R+GD + L  ++DE    S+
Sbjct: 430 AERCGILDRAVHRVDHVQFGVVLGE------DGKKFKT--RSGDTVKLSDLLDEGMKRSL 481

Query: 423 RFMMLWRKN-----SELLD------------------------FDFCKVKEQSKENPVFY 453
             +    +N      EL D                        F F K+ E  + N   Y
Sbjct: 482 NQLESRGRNDVLTPQELKDAQEAVAYSCIKYADLCHNRISDYIFSFDKMLE-DRGNTAVY 540

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENA 512
           + Y Y R  SI R + + F DL   L   N+ +  E E+  ++  L +H      ++   
Sbjct: 541 LLYTYTRICSIARNSGEDFSDLAKVLEGVNIDLSHEKEWKLAKTLLKMH-----DILIKC 595

Query: 513 TIAQEPYKLAFYLYDLASVFHGHW--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +     + L  + Y++ +VF   +   +  E  +   + A NR     R+ L  A A+++
Sbjct: 596 SNELFLHFLCEFCYEVCTVFTEFYDSCYCIEKNKAGEIIAVNRS----RILLCEATAAVL 651

Query: 571 NSGLNIIGVE 580
                I+G++
Sbjct: 652 RQSFFILGLK 661


>gi|115462265|ref|NP_001054732.1| Os05g0163000 [Oryza sativa Japonica Group]
 gi|46981337|gb|AAT07655.1| putative Arginyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113578283|dbj|BAF16646.1| Os05g0163000 [Oryza sativa Japonica Group]
 gi|222630303|gb|EEE62435.1| hypothetical protein OsJ_17227 [Oryza sativa Japonica Group]
          Length = 606

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 127/583 (21%), Positives = 232/583 (39%), Gaps = 96/583 (16%)

Query: 48  NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  + SR  G      +P  I + I   +     ++S  +AG GF+N+ LS S++ K +
Sbjct: 63  NAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRI 122

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++V+GI+    ++     V ++F S N    MHVGH R  ++GDTLA +  FS  EV 
Sbjct: 123 QDMLVNGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVL 181

Query: 163 REYYINDAGAQINTLALSVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           R  ++ D G Q   L   +F +   +++       DL   Y           E  D+   
Sbjct: 182 RRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQ 241

Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +  L   EE++       +   + +I R++   +    ++ + E      +P  I  ++
Sbjct: 242 AVVRLQGGEERYRA-----AWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPF-IPQVL 295

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           + L  +G + E                +  +++F   + G  +   ++K DG + Y + D
Sbjct: 296 EELNNKGLIKES---------------EGAKVIF---IEGHQIPLIVVKRDGGFNYASTD 337

Query: 338 LA--YFKCKYERGFDNMIYVMGSDHSGY------VKRLEAVAAAVSEKK-AQINVLLCEL 388
           LA  +++   E+  + +IYV       +        R+        EKK  + N +   L
Sbjct: 338 LAALWYRLNVEKA-EWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGL 396

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMMLWRKNSELLDFDFCKVKEQS- 446
           V L  DG   +   R+ + + L  ++DE  S S    +    +N +++D+   ++++ S 
Sbjct: 397 V-LGSDGK--RFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSE 453

Query: 447 ------------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                                         K N   Y+QYA+AR  SI R++     +L 
Sbjct: 454 AVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELK 513

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                    P E         L ++L  +  V+E A     P  L  YLY+L+ +F   +
Sbjct: 514 MSGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFY 566

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++          Q         RL L  A A ++     ++G+
Sbjct: 567 TN---------CQVVGSPEETSRLLLCQATAVVMRQCFELLGI 600


>gi|253566485|ref|ZP_04843938.1| arginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251944657|gb|EES85132.1| arginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301165151|emb|CBW24721.1| putative arginyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 597

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 129/582 (22%), Positives = 241/582 (41%), Gaps = 97/582 (16%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG     + 
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHADA-QYGIVSADEN 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L
Sbjct: 115 APLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD-----------KYSSELLNF 224
           + + +Y +      S    D   G Y   + KH   E+A+           + +S L+N 
Sbjct: 175 A-WQKYGKGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNE 233

Query: 225 PEE---KWLPIVKDYSVQAMMKIIRDDLKA--------LNIQHD-IFISEDDFHRGDPSP 272
             E   KW     D  V+A+ +++ + + A        + +  D I+   + +  G    
Sbjct: 234 AREMLVKWE--AGDPEVRALWQMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEGKEKV 291

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +  +      +G+ ++      K   +   D+         T  G D  + LL+ DG+  
Sbjct: 292 MEGL-----EKGFFFK------KEDGSVWADL---------TAEGLD-HKLLLRGDGTSV 330

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQIN-----VL 384
           Y   D+   K ++ +   D MIYV+G++ + + + L  +         K+ ++     V 
Sbjct: 331 YMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVE 390

Query: 385 LCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEVGS----------DSVRFMMLWRKNSE 433
           L E     R+G  +       + I T +    E+G           D  R + L      
Sbjct: 391 LPEGKMKSREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYF 450

Query: 434 LLDFDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483
           +L  D  K +    KE+  F      ++QY YAR RS+ R+A +   + P+         
Sbjct: 451 ILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVIPE--------- 501

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V+P   E    E  LI  +A++  V+  A     P  +A Y+YDL   ++  +       
Sbjct: 502 VLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD----- 556

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++  N  + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 557 -FSILREENEDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|297831814|ref|XP_002883789.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329629|gb|EFH60048.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 590

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 230/568 (40%), Gaps = 102/568 (17%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + ++  +     V+S  IAG GF+N+ LS  ++ K + ++++ GI+     +   
Sbjct: 70  PPAVGQALIKSLPTSEMVESCSIAGPGFVNVVLSAKWMAKSIENMLIDGIDTWAPTLSVK 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDYS 237
           +F ++       ++ +   + +Y    LK  +  E  +K    ++    +   P+ +  +
Sbjct: 189 LFEKFPDTDSVTETAIGDLQMFYKKSKLKFDLDPEFKEKAQQAVVRL--QGGDPVYRK-A 245

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
              + +I R++   +  +  + + E      +P  I ++I+ L+ +G V E       SK
Sbjct: 246 WAKICEISRNEFAKVYQRLRVELEEKGESFYNPY-IANVIEELSSKGLVEE-------SK 297

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA------------------ 339
             +   ++     F++ ++       ++KSDG + Y + DL                   
Sbjct: 298 GARVIFIEG----FKAPLI-------VVKSDGGFNYASTDLTALWYRLNEEKAEWIIYLT 346

Query: 340 ----------YFKCKYERGF---DNMIY----------VMGSDHSGYVKRLEAVAAAVSE 376
                     +FK   + G+   D+  Y          V+G D+  +  R   V      
Sbjct: 347 DFGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGDDNKRFRTRSTEV------ 400

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGSDSVRFMMLWRKNS 432
                 V L +L+   +D     + +R  D       L    + VG  ++++  L  K +
Sbjct: 401 ------VRLVDLLDEAKDRSKAALIERGKDKEWTPEELDQTAESVGYGALKYADL--KTN 452

Query: 433 ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            L  + F   +    K +   Y+ YA+AR  SI R++     D+D +L     I  +   
Sbjct: 453 RLTGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGK---DID-ELKKTGKIALDH-- 506

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             +E  L +HL ++   +E A     P  L  YLY L+  F   +S           Q N
Sbjct: 507 -AAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSS---------CQVN 556

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGV 579
                  RL L  A A ++    +++G+
Sbjct: 557 GSAEETSRLLLCEATAIVMRKCFHLLGI 584


>gi|329850270|ref|ZP_08265115.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840585|gb|EGF90156.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 608

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 131/577 (22%), Positives = 234/577 (40%), Gaps = 80/577 (13%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I  R+  D  + S+ IAG GF+N  L+ + L  +  + +      G  ++  
Sbjct: 61  NPREVATRIQVRLNDDERLQSLEIAGPGFLNFKLNDAAL-SMRGNAIAGDARLGAPVVAA 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV I+F   N    MH+GH R AV+G++L  +M F G +VT + +  D G Q+  L +
Sbjct: 120 KRKVIIDFGGPNVAKEMHIGHLRTAVIGESLKRIMRFLGDDVTGDAHFGDWGLQMGQLIV 179

Query: 180 SVFWRYQQALYNNDS---DLPEG----------YYPGVYLKHVGKEL----ADKYSSELL 222
            V        Y +++     PE            YP    +  GK+L    A + ++  L
Sbjct: 180 GVSEEMPDLPYFDEAFSGPYPEASPVTLADLGRIYPKTSQRIKGKDLDFLNAARKATREL 239

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                 +  + + + V +   + R D   L ++ D++  E D    DP  +  +I +L  
Sbjct: 240 QQGRPGYRALWQHFVVVSREALKR-DYALLGVEFDLWNGESD---ADPY-VEPMIADLEA 294

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAY 340
           +G + +      +     +    RK+ L   ++V      PLL   S+GS  Y   D+A 
Sbjct: 295 KGLLVDD--QGARVVHVARPGETRKKKLEDGSVVEVPSPPPLLAVSSEGSAMYGTTDVAT 352

Query: 341 -FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
             + K E   D  +YV+    ++H   V R   +A    E   Q+       V    DG 
Sbjct: 353 ILQRKTEIQPDLYLYVVDQRQAEHFEQVFRTAYLAGYAVE--GQLEHAANGTVN-GPDGT 409

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL--LDFD------------FCKV 442
           P K   R G  + L  +V E    +V  +   +   +L   +F+            F ++
Sbjct: 410 PFKT--RDGGTLKLHELVSEAVEKAVARLHEQKLGEDLSVAEFNATAHKVAVAALKFAEL 467

Query: 443 KEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                 N +F              Y+ Y   R +SI R+A +        L P  ++  E
Sbjct: 468 SNHRLTNYIFDLDRFMTFEGKTGPYLLYQAVRMKSILRKAGEQ------GLVPGAIVVGE 521

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                +E +L++ L  +   +    + + P  LA ++Y LA  F   ++          +
Sbjct: 522 Q----AERELVLLLDGFDGALRETYLKRAPNILADHVYRLAQAFSKFYAA------CPVL 571

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  + + RL LV  V   +  GL+++G+ +P +M
Sbjct: 572 VGDDEAVKISRLGLVQVVLKQLELGLDLMGLSAPGQM 608


>gi|312148451|gb|ADQ31110.1| arginyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 585

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 217/535 (40%), Gaps = 82/535 (15%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257
              Y K+  + E A+K   +LL   E+K +  ++ +       I  I++  +  N   D 
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313
           I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ     
Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDKKADTKVKQ----- 311

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                   + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L  VA 
Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M    +N 
Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 420

Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468
           E          L    +  +K    ++ VF              Y+QY  AR  SI  + 
Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480

Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           K     +   +DF+L               E ++I  ++E      NA     P  L  Y
Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENTINAAKDLNPSILTSY 530

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            Y LA  F  ++        ++ +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|297841275|ref|XP_002888519.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334360|gb|EFH64778.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 590

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 130/581 (22%), Positives = 228/581 (39%), Gaps = 128/581 (22%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + ++  +     V+S  IAG GF+N+ LS  ++ K + +++V GI+     +   
Sbjct: 70  PPAVGQALIKNLPSSEMVESCSIAGPGFVNVVLSAKWIAKSIENMLVDGIDTWAPTLSVK 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +F ++       D+D        V    +G +L   Y    L F  +   P  K+ + QA
Sbjct: 189 LFEKFP------DTD-------SVTETAIG-DLQMFYKKSKLRFDLD---PEFKEKAQQA 231

Query: 241 MMKIIRDDLKALNIQHDIF-ISEDDF------------HRGDP--SP-IRDIIDNLARQG 284
           ++++   D         I  IS ++F             +G+   +P I ++I+ L+ +G
Sbjct: 232 VVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGESFYNPYIANVIEELSSKG 291

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA----- 339
            V E                +  +++F   + G ++   ++KS+G + Y + DL      
Sbjct: 292 LVEEN---------------EGARVIF---VEGFNIPLMVVKSNGGFNYASTDLTALWYR 333

Query: 340 -----------------------YFKCKYERGF---DNMIY----------VMGSDHSGY 363
                                  +FK   + G+   D+  Y          V+G+D+  +
Sbjct: 334 LNEEKAEWIIYLTDLGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGADNKRF 393

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGS 419
             R   V            V L +L+   +D     + +R  D       L    + VG 
Sbjct: 394 RTRANEV------------VRLVDLLDEAKDRSKAALIERGKDKEWTPEELDQTAEAVGY 441

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +++F  L         F F ++     +  V Y+ YA+AR  SI R++       D D 
Sbjct: 442 GALKFADLKTNRLTGYTFSFDQMLNDKGDTAV-YLLYAHARICSIIRKSGK-----DIDE 495

Query: 480 FPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             R     +   D  +E  L +HL ++   +E A     P  L  YLY L+  F   +S+
Sbjct: 496 LKRT---GKIALDHAAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSN 552

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                     Q N       RL L  A A ++     ++G+
Sbjct: 553 ---------CQVNGSAEETSRLLLCEATAIVMRKCFYLLGI 584


>gi|16127589|ref|NP_422153.1| arginyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236405|ref|YP_002518842.1| arginyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|39932235|sp|Q9A347|SYR_CAUCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782950|sp|B8H4W0|SYR_CAUCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13425063|gb|AAK25321.1| arginyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965578|gb|ACL96934.1| arginyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 600

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 137/608 (22%), Positives = 234/608 (38%), Gaps = 119/608 (19%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N A+  ++    +P  IA  +V  +K DP + SV IAG GFIN+ +S   L      I  
Sbjct: 42  NGALAAAKSAKRNPREIAVQVVDILKGDPRLASVEIAGVGFINMRVSDEALSARAREIA- 100

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           S    G  L+    +V I++   N   PMHVGH R +++G+++  L  F G +V  + + 
Sbjct: 101 SDDRTGAQLLETPRRVLIDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHF 160

Query: 168 NDAGAQINTLALSVFWR--YQQALYNNDSDLPEGY------------------------Y 201
            D G Q+  L  ++     +  AL     + P G+                        Y
Sbjct: 161 GDWGFQMGLLISAIMDEDPFINALMEKLPEAPRGFSSADEAKVMAEFEKRITLADLDRIY 220

Query: 202 PGVYLKH----VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           P   ++       KE A K ++EL N        ++  + V      +  +  AL +  D
Sbjct: 221 PAASVRQKEDPAFKERARKATAELQN--GRFGYRLLWRHFVNVSRVALEREFHALGVDFD 278

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           ++  E D        + D+I+ +  Q    +G+L             D+   + R    G
Sbjct: 279 LWKGESD--------VNDLIEPMVLQ-LEAKGLLV-----------QDQGARIVRVAREG 318

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDN--MIYVMG---SDHSGYVKRLEA 369
           D  D P   ++ S+GS  Y   DLA       + FD   ++Y +    +DH   V R  A
Sbjct: 319 DKRDVPPLLVVSSEGSAMYGTTDLATI-LDRRKSFDPHLILYCVDQRQADHFETVFR-AA 376

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------- 415
             A  +E+ A  ++    +     DG P K   RAG  + L  +++              
Sbjct: 377 YLAGYAEEGALEHIGFGTMNGA--DGKPFKT--RAGGVLKLHDLIEMAREKARERLREAG 432

Query: 416 ---------------EVGSDSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQYA 457
                          +VG  +++F  L  +R  S + D D F     + K  P  Y+ Y 
Sbjct: 433 LGAELSEEQFEDTAHKVGVAALKFADLQNFRGTSYVFDLDRFTSF--EGKTGP--YLLYQ 488

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R +S+ R+A +             V  +    + +E  L + L  +   ++ A   + 
Sbjct: 489 SVRIKSVLRRAAE----------SGAVAGRVEIHEPAERDLAMLLDAFEGALQEAYDKKA 538

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A + Y LA  F   ++          + A+   L   RL L       +   L+++
Sbjct: 539 PNFVAEHAYKLAQSFSKFYAA------CPIMSADTETLRASRLTLAETTLRQLELALDLL 592

Query: 578 GVESPNEM 585
           G+E+P  M
Sbjct: 593 GIEAPERM 600


>gi|116208750|ref|XP_001230184.1| arginyl-tRNA synthetase [Chaetomium globosum CBS 148.51]
 gi|88184265|gb|EAQ91733.1| arginyl-tRNA synthetase [Chaetomium globosum CBS 148.51]
          Length = 633

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 129/579 (22%), Positives = 241/579 (41%), Gaps = 110/579 (18%)

Query: 76  PDVDSVF---IAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLI---------GKGTK 122
           PD D +F        F+  +L P+  +  ++  I   G ++G N            KG K
Sbjct: 94  PDNDPLFEKPTVVNYFMAFFLKPAPVVETVIPLIQKHGAQFGCNKFNGLKDPKDPSKGHK 153

Query: 123 -VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+ D G Q   LAL+ 
Sbjct: 154 RMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYQGAGWDVIRINYLGDWGKQYGLLALA- 212

Query: 182 FWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----------SEL----LNF 224
           F +Y  ++AL  +    P  +   +Y++   +  A+K             +EL    L+ 
Sbjct: 213 FEKYGDEEALTKD----PINHLFQLYVRINSEMTAEKEQIEKRKQDGEDVTELEANSLDE 268

Query: 225 PEEKWLPIVKDYSVQAMMKIIR----------DDLKALNIQHDIFISEDDFHRGDPSPIR 274
              ++   + D    A+ +  R          D    LNI+ D +        G+     
Sbjct: 269 QARRYFKKMTDRDPVALAQWKRFRDLSITRYQDTYARLNIKFDEY-------SGESQVSE 321

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKS-DGS 330
           D+++ + ++           ++K   K D     + F++ + G +   +++P++K  DG+
Sbjct: 322 DMMEKIGQE----------MQNKGISKEDKGAMIVDFQALVPGKEGKRLEKPIVKKRDGT 371

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA-----AVSEKKAQINV- 383
             Y   D++    ++E+  FD+MIYV+ S    ++K+L  +        ++ K   IN  
Sbjct: 372 ALYLTRDISELLGRHEKYKFDHMIYVVASAQDLHLKQLFKIIELLGHNEIASKCQHINFG 431

Query: 384 -------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRF--M 425
                         L +++R   D M   M K    +  + +     D +G  SV    M
Sbjct: 432 LVLGMSTRKGTVKFLDDILRDVADKMHETMKKNETKYSQVENPDATADTLGISSVMVQDM 491

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
              R N+   + D      +    P  Y+QYA+AR  SI R+A+    D +      +++
Sbjct: 492 TGKRINNYTFNMD-AMTSFEGDTGP--YLQYAHARVSSIRRRAE--LSDAEIASADLSLL 546

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            +     T  + ++  LA +P  ++N     EP  +  YL+ +       + H +     
Sbjct: 547 TE-----THAVNIVRLLALWPDTVQNTLRTLEPTTVLTYLFKMTHALSSSYDHLQ----- 596

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             V  + R+L   R+ L  A  +++ +G+ ++G+ SP E
Sbjct: 597 --VVGSERELMKARMALYDAAHTVLGNGMRLLGL-SPVE 632


>gi|326435569|gb|EGD81139.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 701

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 153/342 (44%), Gaps = 64/342 (18%)

Query: 43  GHLSTNAAMILSRPL---GL--DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    NAAM ++  L   G+  +P  +A+ I   +  +P VD + +AG GFIN++++ S+
Sbjct: 94  GSYQCNAAMNINNKLKKQGVKSNPREVAQKIADSLPENPVVDKLEVAGPGFINVHVAKSF 153

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           ++   + ++  G       I +  KV ++F S N    MHVGH R  ++G++++ ++ F+
Sbjct: 154 VQAQTNKLLRKGALA--PPIDRKLKVIVDFSSPNIAKEMHVGHLRSTIIGESISRVLEFA 211

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           G+E  R  ++ D G Q   L                    L  F++  + L++ D +  +
Sbjct: 212 GHETHRVNHVGDWGTQFGMLIAHLKDEFPDYKTKAPPIGDLQAFYKASKVLFDQDEEFKK 271

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y        G                    P V   + Q +  + R + + +  + D+
Sbjct: 272 RAYGETVKLQSGD-------------------PDVT-LAWQLICDVSRREFQDIYNRLDV 311

Query: 259 FISE--DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            I E  + F++   S ++ +++ L ++G V +    P             +++ + S   
Sbjct: 312 TIEEKGESFYQ---SRMQGVVEELTKKGLVIDDPENPG------------RKIAWTSARE 356

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
             ++   ++KSDG+YTY  +DLA  + +  E   D ++YV+G
Sbjct: 357 QTNIPLIVVKSDGAYTYDTSDLATLRYRVQEEKADWVVYVVG 398


>gi|207092413|ref|ZP_03240200.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 186

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 25/202 (12%)

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            R  +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   
Sbjct: 3   ARTLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSS 62

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYP 506
           NP++Y+ YA +R  ++  ++           F +  + Q      +  E  L+      P
Sbjct: 63  NPIYYIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLP 112

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVH 564
           + +E++       K+  Y   LAS FH  ++ G+  + P+ + +           L++  
Sbjct: 113 KAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICL 161

Query: 565 AVASIINSGLNIIGVESPNEMS 586
            V+  + +   ++G+E   ++S
Sbjct: 162 MVSLSLTNAFKLLGIEIKTKIS 183


>gi|328947509|ref|YP_004364846.1| arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447833|gb|AEB13549.1| Arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 609

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 145/627 (23%), Positives = 266/627 (42%), Gaps = 115/627 (18%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           +IDC  ++++K+   + +E P     G L +      ++   + P  IA  +   +K   
Sbjct: 24  KIDCP-EIDEKL---VRVENPPRPEMGDLGS-PMFPFAKMFRMAPPAIAASVAQSLKKSA 78

Query: 77  DVDSV------FIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGR-NLIGK----GTKVN 124
           + D+       F A   ++N+ L+  +    IL+SIV  G  YG  +  GK    G ++ 
Sbjct: 79  ENDASLASLGEFDAAGPYVNIKLNKAASASGILASIVSQGENYGSFDSAGKKPLEGQRIM 138

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVF 182
           +EF S N   P+H+GH R   +G++++ ++  +G EV +   IN+ G  I  + LA  +F
Sbjct: 139 VEFSSPNTNKPLHLGHLRNDALGESVSRILKKAGAEVFKVDLINNRGIHICKSMLAYKLF 198

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKH-VGKELA--DKYSSELLNFPEEKWLPIVK----D 235
                  +   ++ PE    G+   H VG+     DKYS E     ++    +VK    D
Sbjct: 199 -------HEAKNETPESL--GMKGDHFVGQCYVEFDKYSKEHPEAVQQAEEMLVKWEQGD 249

Query: 236 YSVQAMMKI--------IRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYV 286
             V+ + +         +++  K   I  D F  E D + +G     +D I     +G  
Sbjct: 250 KEVRGLWQKMNSWTLDGLKETYKRTGIVFDKFYFESDTYLKG-----KDEILKGLEKGVF 304

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD---RPLLKSDGSYTYFAADLAYFKC 343
           ++    P  S      D+  K         G D D   + LL+ DG+  Y   D+     
Sbjct: 305 FKA---PDGSVRIDVTDVVGK---------GKDEDSHEKVLLRKDGTSVYITQDIGTAIS 352

Query: 344 KY-ERGFDNMIYVMGSDHSGYVK----RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           ++ +  F+ ++YV+ S+ + + K     L+ +    +EK   ++  L  L          
Sbjct: 353 RHNDWPFNQLVYVVASEQNYHFKILFHILKKLGFGWTEKLFHLSYGLVNLPS-------G 405

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFM-MLWRKNS-------------ELLDFDFCKVK- 443
           +M  R G  +    ++D + + +++ +    R NS               LD+    V  
Sbjct: 406 RMKSREGTVVDADDLIDSLHAQALKAIEERGRDNSVGNPDEVAEKVALAALDYYLLNVAP 465

Query: 444 --------EQS---KENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESE 490
                   E+S     N   Y+QY  AR  SI R+AK+  + P    + F  +++  ESE
Sbjct: 466 VKDMLFNPEESLSFNGNTGPYLQYMGARIASILRKAKEQGLEPSSSVEDF--SLLTAESE 523

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
           +      LI  L  +P +++ +    +P  +A YLYD++  F   +   R+ P +    +
Sbjct: 524 W-----ALIKDLERFPSIVQKSAETLDPSGMASYLYDVSKSFSAFY---RDCP-IVGTAS 574

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNII 577
            N +L   RL L     S++ SG++++
Sbjct: 575 ENERLAKARLALAQCTLSVLKSGMDLV 601


>gi|237717232|ref|ZP_04547713.1| arginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237718987|ref|ZP_04549468.1| arginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405999|ref|ZP_06082549.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647975|ref|ZP_06725526.1| arginine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806911|ref|ZP_06765736.1| arginine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443215|gb|EEO49006.1| arginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229451765|gb|EEO57556.1| arginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356874|gb|EEZ05964.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292636691|gb|EFF55158.1| arginine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294445940|gb|EFG14582.1| arginine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 605

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   +   
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           +  V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226
           +  W+     Y N  + PE          G Y   + KH     KEL  K++++ ++  E
Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDE 227

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     K  +   +M+  R+ L               +  GDP  +R + + +    +V
Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317
           Y G       +T +K  +   ++ + S                              +  
Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322

Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   + 
Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +  +  V     +    +G   KM  R G  +    +++E                   
Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           AR +S+ R+A +   + P+          IP   E    E  LI  +A++  V++ A   
Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGED 541

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P  +A Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N
Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595

Query: 576 IIGVESPNEM 585
           ++G+E P+ M
Sbjct: 596 LLGIEVPSRM 605


>gi|218290406|ref|ZP_03494536.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239534|gb|EED06728.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 566

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 136/592 (22%), Positives = 245/592 (41%), Gaps = 90/592 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P + A G L+       +R +  +P+ IAE +  R++    V+S   A KGF+N+ 
Sbjct: 26  MLEYPPNPALGDLAL-PCFQFAREMRKNPVQIAEELAERVRQADGVESA-QAEKGFLNIR 83

Query: 93  LSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ S +  +++   + S  E      G+G    I++ S N   P  VGH R  ++G  L 
Sbjct: 84  LARSEFAERVVGQAIASVHELFSEERGRGRTAVIDYSSPNIAKPFGVGHLRSTIIGHALK 143

Query: 152 SLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   G+ V    ++ D G Q    +A  + W        N+ ++ +     ++  +V 
Sbjct: 144 RMMREDGWRVEGVNHLGDWGTQFGKVIAAYLKW-------GNEDEVRKDPVKELFRLYV- 195

Query: 211 KELADKYSSELLNFPEEK-----WLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFISE 262
                ++  E  + PE +     W   +++   +A       I + L+A    +D+   E
Sbjct: 196 -----RFHQEAESSPELEDEGRLWFKKLEEGDPEATRLWRWFIDESLRAFKQVYDLLGVE 250

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            + + G+ S   D +D +  Q    +G+L   K +  +  D+                D 
Sbjct: 251 FEHYIGE-SFYNDKMDAIV-QELREKGLLV--KDQGAEVVDLSA-------------FDM 293

Query: 323 P---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           P   ++KSDG+  Y   DLA    +++  G D ++YV+G++   + +++  V   +    
Sbjct: 294 PPCIIVKSDGTSIYATRDLAAADYRHKAFGADTLLYVVGAEQKLHFEQVFKVLELMGRDY 353

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE----------- 416
           A+ N +  +   +  +G   ++S R G  + L           R ++DE           
Sbjct: 354 AK-NCVHVQFGLMKFNGQ--RLSTRRGHVVYLEDVLQKAIEEARAIIDEKNPALENKDAI 410

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V F  L       +DF +  V     E    YVQY +AR  S+ R  K    
Sbjct: 411 ARQVGVGAVIFNDLKTYRVHEVDFRYEDVLNFDGETGP-YVQYTHARASSVLR--KAEAD 467

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                  P      + E D +E  LI  LA+    +E A    +P  +A Y   +   F+
Sbjct: 468 AAAAKWAP------DYEPDDAEWALIFLLAQANESLERAVDTYDPSVIARYALQMCHAFN 521

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +    ++P    +QA+    T  RL L  AV   +   L ++G+E+P EM
Sbjct: 522 RFY---HDHP---ILQADEPARTS-RLALTQAVREALAKSLYLLGIEAPEEM 566


>gi|126695545|ref|YP_001090431.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126542588|gb|ABO16830.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 604

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 152/652 (23%), Positives = 258/652 (39%), Gaps = 124/652 (19%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIFKKNPR 65

Query: 63  TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIEYGRN 115
            I+   +  +K +  +     S+ IAG GFIN+ L    L  +I+S+I    +GI   R 
Sbjct: 66  DISNDFINLLKKNKSIAKLCKSLEIAGPGFINIKLKDEVLINEIISNIQCNRAGIPLIRK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            + +G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D G Q
Sbjct: 126 DLDRGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYNND---------SDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
              L   +     + LY+ND         SDL E Y           E   +   E++  
Sbjct: 186 FGMLITQL-----KDLYSNDLEEIGKIKISDLVEFYKESKKRFDNESEFQKRSREEVVKL 240

Query: 225 PEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP-IRDI 276
                   K   ++ D S Q   +I     K L I+ +         RG+   +P ++ +
Sbjct: 241 QSGDIKSIKAWKLLCDQSRQEFDEI----YKNLKIKIE--------ERGESFYNPFLKSV 288

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSDGSYT 332
           ID+L  +  + E            KC       +F   M   +  +PL     K DG + 
Sbjct: 289 IDDLNLKKILVED--------QGAKC-------VFLDGMTNKE-GKPLPLIIQKKDGGFN 332

Query: 333 YFAADLAYFKCKYER---GFD--NMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVL 384
           Y   DLA  + ++ +   G D   +IYV     ++H   V ++   A  + E   Q++ +
Sbjct: 333 YATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPE-NCQVDHV 391

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
              LV+   DG  +K   R G+ I L+ +++E                            
Sbjct: 392 PFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLEDEDRYENEEFIANT 448

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              +G  +V++  L +       F F K+   +  N   Y+ Y   R   I R+   ++ 
Sbjct: 449 SRIIGFGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKRKNDFVYD 507

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             DF              + SE +LI  L ++  VI +      P +L  YL++L   F+
Sbjct: 508 SKDFQYVNYE--------NKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFN 559

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +      P L+      + + + RL L    A  +   L ++G+E+   M
Sbjct: 560 RFYDQV---PILK----EEKNIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|304384147|ref|ZP_07366600.1| arginine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304334774|gb|EFM01051.1| arginine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 604

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 141/631 (22%), Positives = 245/631 (38%), Gaps = 131/631 (20%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +++ +    GHL T       +     P  + + I   +K +    + F   KGF+NL
Sbjct: 28  IQLQKTKREFEGHL-TLVTFPFVKTARKKPEEVGQEIGECLKANCTAVASFNVVKGFLNL 86

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++PS    +L+ I      +G   +   +  V IE+ S N   P+H+GH R  ++G +L
Sbjct: 87  VVAPSAWLSLLNDINADE-HFGEKAVTSNSPLVMIEYSSPNTNKPLHLGHVRNNLLGWSL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQA--LYNNDSDLPEGYYPGVYLK 207
           + +M  +G +V +   +ND G  I    L+   W + +         D   G Y   + K
Sbjct: 146 SQIMQANGNKVVKTNIVNDRGIHICKSMLAWQKWGHGETPETSGKKGDHLIGDYYVAFDK 205

Query: 208 H----------------VGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD 247
           H                + +E A+K + E      E    +VK    D  V+ + K++ D
Sbjct: 206 HYREEIKMLKAQLMNEGIDEETAEKRAKEEAPLMMEAREMLVKWEQGDPEVRRLWKMMND 265

Query: 248 --------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                     +AL +  D I+   D +  G       + + L R      GI    K   
Sbjct: 266 WVYAGFDETYRALGVSFDKIYYESDTYLEGKAK----VEEGLKR------GIF-ERKGDG 314

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVM 356
           +   D+  + L            + LL+SDG+  Y   D+     ++ R F  D MIYV+
Sbjct: 315 SVWADLSNEGL----------DQKLLLRSDGTSVYMTQDIGTADMRF-RDFPIDKMIYVV 363

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFI----- 408
           G++ + + + L  +   +  K  +      ELV      + +   KM  R G  +     
Sbjct: 364 GNEQNYHFQVLSILLDRLGFKWGK------ELVHFSYGMVELPNGKMKSREGTVVDADEL 417

Query: 409 -----------------TLRHVVDE--------VGSDSVRFMML---WRKN-----SELL 435
                             L +V +E        VG  ++++ +L    RKN      E +
Sbjct: 418 IEAMIESAARMSDDKVNKLENVSEEERHEIARIVGMGALKYFILKVDARKNMLFNPEESI 477

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTS 494
           DF+          N   ++QY YAR RSI R+A+ +  PD   +  P             
Sbjct: 478 DFN---------GNTGPFIQYTYARIRSILRKAEGLNIPDQLSEDLP---------LGAK 519

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E +LI  + E+  V+  +     P  +A Y Y+L   F+  +           +   +  
Sbjct: 520 EAELIQKMDEFGAVVVQSGKDYSPSGIANYCYELTKEFNQFYHD------YSILHEEDEG 573

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++RL L   VA +I +G+ ++G+E P  M
Sbjct: 574 KKIVRLMLAKNVAKVIKNGMALLGIEVPERM 604


>gi|110637981|ref|YP_678188.1| arginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280662|gb|ABG58848.1| arginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 621

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 138/633 (21%), Positives = 264/633 (41%), Gaps = 106/633 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           K  L+E    +  E      I++E  R    G L T       +   + P  I   I A 
Sbjct: 36  KGLLQEFSITVSAED-----ILLEPTRKDFEGSL-TFVVFPYIKQAKVAPEQIGARIGAF 89

Query: 72  IKID-PDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
              D P V + F   KGF+N+  + + ++ ++ +S +    +Y +   GKG KV +E+ S
Sbjct: 90  CAADIPAVVASFNVVKGFLNVVFNDALWVEQLYASFLRP--DYAQLQDGKGEKVMVEYSS 147

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N   P+H+GH R   +G +++ ++  +G++V +   +ND G  I    ++    YQ++ 
Sbjct: 148 PNTNKPLHLGHLRNNFLGYSISQILKANGFDVIKANLVNDRGIHICKSMIA----YQKSG 203

Query: 190 YNN-------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                       D   G Y   + K + KE+    ++ +     +K  PI+K+   QAM+
Sbjct: 204 LGETPVSTGMKGDHLVGKYYVAFDKQLKKEVEALVAAGVEEDKAKKEAPILKE--AQAML 261

Query: 243 -------KIIRDDLKALN---------IQHDIFISEDDFHRGDPSPI--RDIIDNLARQG 284
                  K + D  K +N             I ++ D F+    + +  +DI++      
Sbjct: 262 LKWEQGDKEVYDLWKTMNGWVYDGFNASYKKIGVTFDHFYYESNTYLLGKDIVE------ 315

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
              EG+    K    ++ D     +    T  G D ++ +L+SDG+  Y   DL   + K
Sbjct: 316 ---EGL---AKGVFNKRAD---GSVWIDLTAEGLD-EKLVLRSDGTSVYITQDLGTAELK 365

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSK 402
           Y+  G    +YV+G++   +   L  +   + +  A  +  +   +V L       KM  
Sbjct: 366 YKDFGCKRSVYVVGNEQDYHFIVLIHILKKLGKPYANGVYHMSYGMVDLPSG----KMKS 421

Query: 403 RAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSE 433
           R G  +    +VDE                             +G  ++++ +L     +
Sbjct: 422 REGTVVDADDLVDEMIATAKERTLEQGKTDGFSEEQATHLYETLGLGALKYFLLKVDPKK 481

Query: 434 LLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
            + F+  + +  Q    P  ++QY +AR  +I R+A ++   ++  L   +VI +   F+
Sbjct: 482 RMMFNPEESIDFQGHTGP--FIQYTHARISAILRKAAEL--GINEQLPAGHVINKLHPFE 537

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            S L++   L+ +P  I  A     P  +A Y++D+A  ++  ++       +   Q  +
Sbjct: 538 VSVLEM---LSRFPEKIREAGNDYSPSTIANYIFDVAKEYNRFYA------EVSIFQEPD 588

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L   R+    AVA  I  G+ ++G+E P +M
Sbjct: 589 EQLKSFRIAFCRAVAKTIKDGMLLLGIEVPEKM 621


>gi|326793312|ref|YP_004311133.1| arginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544076|gb|ADZ85935.1| arginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 571

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 133/595 (22%), Positives = 243/595 (40%), Gaps = 92/595 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK--GFIN 90
           +IE P + A G  +      L++ L   P  IA+ IV  +    ++D +  A     +IN
Sbjct: 27  MIEVPNNVAMGDYAF-PCFKLAKALRKAPPMIAKDIVDTL---GEIDFIEKAENVNAYIN 82

Query: 91  LYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            +L+ S ++++IL +++     YG         V +++ S N   P HVGH R  V+G++
Sbjct: 83  FFLNRSVFVKEILLAVLADRESYGLAKEKNKGNVVVDYSSPNIAKPFHVGHLRSTVIGNS 142

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +    GY      ++ D G Q   L ++ + +Y       +  + E     V     
Sbjct: 143 LYHIFEALGYNCIGVNHLGDWGTQFGKLIVA-YKKYSSKEEVEEKGISELLRIYVLFHDE 201

Query: 210 GKE------LADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            KE       A  Y +++    EE     KW    K+ S+    ++     K L +  D 
Sbjct: 202 AKEHPEMDQEARNYFTKMEQGDEEALALWKWF---KEVSLNEFERV----YKMLGVTFDS 254

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E  ++    + I+D+ D         +G++   +     + D +             
Sbjct: 255 YNGEAFYNDKMDAVIKDLED---------KGLIEISEGAKIVRLDEENMAPCL------- 298

Query: 319 DVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDH----SGYVKRLEAV- 370
                + K+DGS  Y   D+    Y K  YE  F   IYV         + + K +E + 
Sbjct: 299 -----ITKNDGSSLYATRDITAAKYRKETYE--FKKCIYVTALQQNLHFAQWFKVIEKME 351

Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                               A +S +   + + L ++++   D     + ++  D     
Sbjct: 352 WDWAKDLVHVPFGMVSMEGGAKLSTRSGNV-IFLEDILKEAVDKTKKIIEEKNPDLDNKD 410

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470
            V ++VG  +V F  ++    + + F + +V + Q +  P  YVQY +AR  S+ ++A  
Sbjct: 411 EVANQVGIGAVIFDDMYNNIIKDIQFSWERVLDFQGETGP--YVQYTHARACSLLKKA-- 466

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               LD D  P   I + +  D + L +   LA++  VIE+A    EP  +A Y  DLA 
Sbjct: 467 ---GLDIDNLPDLEISESAIADDTVLAVAKELADFKNVIESAAANFEPSYIARYAVDLAQ 523

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  ++   E P L      +  +   RL +V A    I + L+++G+++P +M
Sbjct: 524 AFNKFYN---EQPIL----VGDEAVKNSRLAVVIATKYTIKNALHLLGIKAPVQM 571


>gi|260437972|ref|ZP_05791788.1| arginine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809598|gb|EFF68803.1| arginine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 588

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 125/591 (21%), Positives = 246/591 (41%), Gaps = 76/591 (12%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P  I + +VA ++ +   + V     GFIN+ +S 
Sbjct: 33  RPDLCEY---QCNGAMAAAKEYKKAPFMIGDEVVAILQDNSAFEKVECIKPGFINMVMSA 89

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            ++   + ++ +   ++G +   K   V +++  AN   P+H+GH R AV+G+++  +  
Sbjct: 90  DFIGGYVRAMALED-KFGCDCEPKDETVFVDYGGANVAKPLHIGHLRSAVIGESVKRICK 148

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-------SDLP------EGYYP 202
           F+GY+   + ++ D G Q+  +   +  R     Y +D       ++ P      E  YP
Sbjct: 149 FAGYKTIGDVHLGDWGLQMGLIITELKERKPDLPYFDDNFTGEYPAEAPFTISELEEIYP 208

Query: 203 GVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
               K   KE A+     + ++ LL      +  + K + +   +  ++ +   LN+  D
Sbjct: 209 CASGK--SKEYAEYKKSAQNATYLLQNGHRGYTALWK-HIINVSVADLKKNYGNLNVHFD 265

Query: 258 IFISEDDFHRGDPSPIRDIIDN---LARQGYVYEGILPPPKSKTTQKCDMDRKQLL--FR 312
           ++  E D        ++D++D       QG +   I     S+    C + +      + 
Sbjct: 266 LWKGESDAQPYIADMVKDMVDRGIAHESQGAIVVDIAEENDSRELPPCIIQKSDGAANYE 325

Query: 313 STMVGDDVDRPLLKSDGSYTYFA---ADLAY---FKCKYERG---------FDNMIYVMG 357
           ++ +   ++R  L +  SY Y A    +L Y   F+   + G         F     + G
Sbjct: 326 TSDLATLIEREKLYAPKSYIYLADKRQELHYTQFFRVARKAGIVSPDTELKFIGFGTMNG 385

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCE-LVRLYRDGMPIK-MSKRAGDFITLRHVVD 415
           SD   +  R             Q  VL  E L++   D +  K M+ R  D    R+   
Sbjct: 386 SDGKPFKTR-------------QGGVLRLEYLIKEIEDKVYEKIMANRTVDESEARNTAK 432

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            VG  ++++  L  + S+   FD  +    +    P  Y+ Y   R +SI ++    + +
Sbjct: 433 MVGLAALKYGDLSNQASKDYVFDIDRFTSFEGDTGP--YILYTIVRIKSILKK----YEN 486

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
               +   +    ESE   SE  L++ L     +I+ A     P+K+  ++YDL++ F+ 
Sbjct: 487 AGGVVSGIHTANPESE---SERSLMLVLTGMQDMIKTAYEESAPHKICKFIYDLSNAFN- 542

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H+ H  E   L     N +K     + L+     ++ + ++++G+E+P  M
Sbjct: 543 HFYH--ETKILSEEDENKKK---GYIALIKLTKDVLETCVDLLGIEAPERM 588


>gi|293368715|ref|ZP_06615320.1| arginine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292636180|gb|EFF54667.1| arginine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 605

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 129/607 (21%), Positives = 244/607 (40%), Gaps = 139/607 (22%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   +   
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           +  V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226
           +  W+     Y N  + PE          G Y   + KH     KEL  K++++ ++  E
Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDE 227

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     K  +   +M+  R+ L               +  GDP  +R + + +    +V
Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317
           Y G       +T +K  +   ++ + S                              +  
Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322

Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   + 
Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +  +  V     +    +G   KM  R G  +    +++E                   
Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A +        +     IP   E    E  LI  +A++  V++ A     P
Sbjct: 491 ARIQSVLRKAAE------SGIVISEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSP 544

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N++G
Sbjct: 545 SIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMNLLG 598

Query: 579 VESPNEM 585
           +E P+ M
Sbjct: 599 IEVPSRM 605


>gi|145631016|ref|ZP_01786792.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983483|gb|EDJ90959.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 260

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 2/135 (1%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++  +++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTL 177
           R  ++ D G Q   L
Sbjct: 155 RANHVGDWGTQFGML 169


>gi|331091306|ref|ZP_08340146.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330404467|gb|EGG84011.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 588

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/614 (21%), Positives = 245/614 (39%), Gaps = 122/614 (19%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           RP  C +     N AM  ++     P+ IA  +V +++    +  V     GFIN+ LS 
Sbjct: 33  RPDLCEY---QCNGAMAAAKTYKKAPIMIAGDVVEKLQNSEAISKVEAVNPGFINIKLSE 89

Query: 96  SYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            ++   L+ +      G+E       +   + I++  AN   P+HVGH R A++G+++  
Sbjct: 90  EFVADYLNKMSEDDHLGLEQNE----EPKTIVIDYGGANVAKPLHVGHLRTAIIGESVKR 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------------DLPEG 199
           +  F G EV  + ++ D G Q+  +   +  R  +  Y +++             D  E 
Sbjct: 146 IARFMGDEVIGDVHLGDWGYQMGLIITELKKRKPELPYFDENFAGEYPEEAPFTIDELEE 205

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV------KDYSV--QAMMKIIRDDLKA 251
            YP           A  Y+ E  ++ EE            K Y+   + +M++   DLK 
Sbjct: 206 IYP----------TASAYAKEHDDYKEEALHATYLLQNGHKGYTAIWKHIMRVSVTDLKK 255

Query: 252 ----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               LN+  D++  E D     P    D+++ L ++GY                   D  
Sbjct: 256 NYANLNVDFDLWKGESDAQPYIP----DMVEYLKKEGY----------------ARYDDG 295

Query: 308 QLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362
            L+       D  + P   +LKSDG+  Y   DLA    + E+ +  D +IYV+      
Sbjct: 296 ALVIDVKEETDTKEIPPCMILKSDGASLYGTTDLATL-IEREKLYNPDEVIYVVDKR--- 351

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDE 416
             + L  V    S +KA I     +L  +       +DG P K   R G  + L +++ +
Sbjct: 352 --QELHFVQVFRSARKAHIVKDDTKLTFIGFGTMNGKDGKPFKT--REGGVMRLENLIGD 407

Query: 417 VGSDSVRFMM--------LWRKNSELLDFDFCK---VKEQSKENPVF------------- 452
           +       +M          RK ++++     K   +  Q+ ++ VF             
Sbjct: 408 IEERMYGKIMENRAIEEEEARKTAKIVGLSAIKYGDLSNQASKDYVFDVDRFTSFEGNTG 467

Query: 453 -YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ Y   R +SI  +  ++         P     +++  D SE  L++ + ++  VIE 
Sbjct: 468 PYILYTIVRIKSILAKYTEM------KTTPARASVKKAVSD-SEKALMLEITKFNSVIET 520

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   + P+K+  Y+Y+LA+ F+  +         + +   N +     + ++     +  
Sbjct: 521 AYEEKAPHKICAYVYELANAFNRFYHE------TKILAEENEERQKSFISMLLLTKEVFE 574

Query: 572 SGLNIIGVESPNEM 585
           + ++++G E+P  M
Sbjct: 575 ACVDMLGFEAPERM 588


>gi|224532728|ref|ZP_03673345.1| arginine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512346|gb|EEF82730.1| arginine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 585

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 218/540 (40%), Gaps = 92/540 (17%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N+ +S   Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+
Sbjct: 84  YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201
           G++L+ ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y 
Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203

Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253
              Y K+  + E A+K   +LL   E+K       W  + K ++++     I++  +  N
Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308
              D I++  + F  G     ++++     +G+ Y+     I     S + +K D   KQ
Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
                        + L++S+G+  Y   DL     +  E  F  MIYV+GS+   + K L
Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFKEMIYVVGSEQIQHFKSL 358

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             VA  +   K +  + L   +    DG   KM  R G+ I   +++  +    +  M  
Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQ 415

Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463
             +N E          L    +  +K    ++ VF              Y+QY  AR  S
Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475

Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           I  + K     +   +DF+L               E ++I  ++E    I NA     P 
Sbjct: 476 ILEKYKALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  Y Y LA  F  ++        ++ +  NN  LT  R++ +  +   I + + ++ +
Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKTILQTIKNCMYLLNI 579


>gi|170114617|ref|XP_001888505.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636617|gb|EDR00911.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 587

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 193/472 (40%), Gaps = 73/472 (15%)

Query: 102 LSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           L+ +  SG  EYG N  GKG +V IE+ S N     H+GH R  ++G  LA+L    G+E
Sbjct: 109 LTHLTPSGQPEYGSNDSGKGKRVIIEYSSPNIVKEFHLGHLRSTIIGAFLANLYKACGWE 168

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V    Y+ D G Q   +A        Q  ++ D   P  +   VY+K V K+L    +  
Sbjct: 169 VISMNYLGDWGTQFGMVATGYEKYGSQEEFDQD---PIMHLYNVYVK-VTKDLE---TDP 221

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKI----------IRDDLKALNIQHDIFISEDDFHRGDP 270
            +     +W   ++D     + K            ++    LNI+ D++  E +  +   
Sbjct: 222 KVKVEAARWFKRMEDGDEDVLKKWHGWRETSLEKYQEAYDQLNIKFDVYTGESNVSK--- 278

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDG 329
             +   +  L   G + +         + ++ D+++  L             P++ K+DG
Sbjct: 279 ESMDKALVQLQDMGLISD-------RDSAKEVDLNKWNL-----------KAPIVRKTDG 320

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQINVL 384
           + TY   D+     +YER  FD MIYV+G+      + + K +E +    ++    IN  
Sbjct: 321 TSTYLTRDIGGAIERYERYKFDKMIYVVGAAQDFHLAQFFKIVELMGFPWAKNLLHINYG 380

Query: 385 LCELVRLYRDGMPI---KMSKRAGDFITLRHVVD---------------EVGSDSVRFMM 426
           + + +R  R G  +   ++ K+AG+ +  +   +               E+G   ++   
Sbjct: 381 MVQGMRT-RKGTAVFLDRIIKKAGNVMHEQMKKNDEKYAVIQDPQATSLEIGITGIKIQD 439

Query: 427 LWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +  K      F++ ++   +    P  Y+QYA++R  SI R+   + P     L P + I
Sbjct: 440 MAAKRINDYTFNWDRMLSFEGDTGP--YLQYAHSRLASIGRKNPQLLP-----LPPTSQI 492

Query: 486 PQESEFDTSELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              +    S  + I   L  YP V+  A    EP  +  + + LA      W
Sbjct: 493 ATHALAQYSNAREIAFLLGTYPDVVNVALKTHEPSGVVTFAFKLAHAISTAW 544


>gi|295085554|emb|CBK67077.1| arginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 605

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   +   
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLVQVTDA 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           +  V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226
           +  W+     Y N  + PE          G Y   + KH     KEL  K++++ ++  E
Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDE 227

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     K  +   +M+  R+ L               +  GDP  +R + + +    +V
Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317
           Y G       +T +K  +   ++ + S                              +  
Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322

Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   + 
Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +  +  V     +    +G   KM  R G  +    +++E                   
Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           AR +S+ R+A +   + P+          IP   E    E  LI  +A++  V++ A   
Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGED 541

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P  +A Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N
Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595

Query: 576 IIGVESPNEM 585
           ++G+E P+ M
Sbjct: 596 LLGIEVPSRM 605


>gi|167763757|ref|ZP_02435884.1| hypothetical protein BACSTE_02137 [Bacteroides stercoris ATCC
           43183]
 gi|167697873|gb|EDS14452.1| hypothetical protein BACSTE_02137 [Bacteroides stercoris ATCC
           43183]
          Length = 605

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 138/625 (22%), Positives = 254/625 (40%), Gaps = 116/625 (18%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           +I +++ +    GHL+      L R     P   A+ I   ++ +    S F   KGF+N
Sbjct: 27  QIQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I     +YG          V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNGIHADA-KYGIVAATDNAPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA++++ +G  V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 145 LANIISANGNRVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197

Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDDLKA 251
            Y   + KH     KEL  K+ SE ++  E K       P++K+ + + ++K    D + 
Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQSEGMSEEEAKAKAEAESPLMKE-AREMLVKWEAGDPEV 256

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +   +    D  + G     R +     +  Y  E  L   K K  +  +   K   +
Sbjct: 257 RTLWKKM---NDWVYAGFDETYRMMGVTFDKIYYESETYLEG-KEKVMEGLE---KGFFY 309

Query: 312 R-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS- 361
           R       + + G+ +D + LL++DG+  Y   D+   K ++ +   D M+YV+G++ + 
Sbjct: 310 RKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMVYVVGNEQNY 369

Query: 362 -------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                                    G V+  E    +        + L+ E++   ++  
Sbjct: 370 HFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMINTAKE-- 427

Query: 397 PIKMSKRAGDFITLRHVVDE--------VGSDSVRFMML---WRKN-----SELLDFDFC 440
                  +G+   L  +  E        VG  ++++ +L    RKN      E +DF+  
Sbjct: 428 ------TSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKNMTFNPKESIDFN-- 479

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
                   N   ++QY YAR +S+ R+AK+    +   L      P   E    E  LI 
Sbjct: 480 -------GNTGPFIQYTYARIQSVLRKAKEAGISVPAQL------PAGIELSEKEEGLIQ 526

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +A++  +++ A     P  +A Y YDL   ++  +           ++  N  + + RL
Sbjct: 527 MVADFAAIVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEAVKIFRL 580

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L   VA ++  G+ ++G+E P+ M
Sbjct: 581 ALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|55980067|ref|YP_143364.1| arginyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|81364722|sp|Q5SM45|SYR_THET8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17942832|pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase
 gi|14275785|emb|CAC39622.1| arginyl-tRNA synthetase [Thermus thermophilus]
 gi|55771480|dbj|BAD69921.1| arginyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 592

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 246/612 (40%), Gaps = 141/612 (23%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ L   P  IA+ +  R+ +   V+     G G++N  L    L   L   +     +
Sbjct: 43  LAKELRKPPQAIAQELKDRLPLPEFVEEAVPVG-GYLNFRLRTEAL---LREALRPKAPF 98

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            R    +   V +E  S NP   +HVGH R   +GD +A ++A++G EV    YI+D G 
Sbjct: 99  PR----RPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGR 154

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPE-E 227
           Q    A ++F      L  +                 GKE  D ++      L   PE E
Sbjct: 155 QA---AETLFALRHYGLTWD-----------------GKEKYDHFAGRAYVRLHQDPEYE 194

Query: 228 KWLPIVKDYSVQAMMKIIRDD-----------LKALNIQHDIFISEDDFHRGDPSPIRDI 276
           +  P +++         +R++           + ALN ++D+ + E D  R     ++  
Sbjct: 195 RLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRA--GLLQKA 252

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTY 333
           +  L +  +V+     P + K      MD       ++ V   ++ P   LL+S+G+ TY
Sbjct: 253 LALLEQSPHVFR----PREGKYAGALVMD-------ASPVIPGLEDPFFVLLRSNGTATY 301

Query: 334 FAADLAYFKCK-----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--- 379
           +A D+A+   K           YE  +   +     +   Y  + E     V  +++   
Sbjct: 302 YAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPEGEAYTPKAEETINVVDVRQSHPQ 361

Query: 380 -----------------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
                            + + L  E V L  +G   +MS R G  +++  V++E      
Sbjct: 362 ALVRAALALAGYPALAEKAHHLAYETVLL--EGR--QMSGRKGLAVSVDEVLEEATRRAR 417

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456
                              V   ++RF M+  +  + +DF + +    +    P  YVQY
Sbjct: 418 AIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFEGDTGP--YVQY 475

Query: 457 AYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           A+AR  SI R+A +   PDL             S+    E  L + L ++   +  A   
Sbjct: 476 AHARAHSILRKAGEWGAPDL-------------SQATPYERALALDLLDFEEAVLEAAEE 522

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGREN--PRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + P+ LA YL DLA+ ++ +++  REN  P    + A    L  +RL LV ++   + +G
Sbjct: 523 RTPHVLAQYLLDLAASWNAYYN-ARENGQPATPVLTAPE-GLRELRLSLVQSLQRTLATG 580

Query: 574 LNIIGVESPNEM 585
           L+++G+ +P  M
Sbjct: 581 LDLLGIPAPEVM 592


>gi|46200208|ref|YP_005875.1| arginyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|81405227|sp|Q72GE2|SYR_THET2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46197836|gb|AAS82248.1| Arginyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 592

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 138/612 (22%), Positives = 246/612 (40%), Gaps = 141/612 (23%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ L   P  IA+ +  R+ +   V+     G G++N  L    L   L   +     +
Sbjct: 43  LAKELRKPPQAIAQELKDRLPLPEFVEEAIPVG-GYLNFRLRTEAL---LREALRPKAPF 98

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            R    +   V +E  S NP   +HVGH R   +GD +A ++A++G EV    YI+D G 
Sbjct: 99  PR----RPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGR 154

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPE-E 227
           Q    A ++F      L  +                 GKE  D ++      L   PE E
Sbjct: 155 QA---AETLFALRHYGLTWD-----------------GKEKYDHFAGRAYVRLHQDPEYE 194

Query: 228 KWLPIVKDYSVQAMMKIIRDD-----------LKALNIQHDIFISEDDFHRGDPSPIRDI 276
           +  P +++         +R++           + ALN ++D+ + E D  R     ++  
Sbjct: 195 RLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRA--GLLQKA 252

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTY 333
           +  L +  +V+     P + K      MD       ++ V   ++ P   LL+S+G+ TY
Sbjct: 253 LALLEQSPHVFR----PREGKYAGALVMD-------ASPVIPGLEDPFFVLLRSNGTATY 301

Query: 334 FAADLAYFKCK-----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--- 379
           +A D+A+   K           YE  +   +     +   Y  + E     +  +++   
Sbjct: 302 YAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPEGEAYTPKAEETINVIDVRQSHPQ 361

Query: 380 -----------------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
                            + + L  E V L  +G   +MS R G  +++  V++E      
Sbjct: 362 ALVRAALALAGYPALAEKAHHLAYETVLL--EGR--QMSGRKGLAVSVDEVLEEATRRAR 417

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456
                              V   ++RF M+  +  + +DF + +    +    P  YVQY
Sbjct: 418 AIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFEGDTGP--YVQY 475

Query: 457 AYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           A+AR  SI R+A +   PDL             S+    E  L + L ++   +  A   
Sbjct: 476 AHARAHSILRKAGEWGAPDL-------------SQATPYERALALDLLDFEEAVLEAAEE 522

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGREN--PRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + P+ LA YL DLA+ ++ +++  REN  P    + A    L  +RL LV ++   + +G
Sbjct: 523 KTPHVLAQYLLDLAASWNAYYN-ARENGQPATPVLTAPE-GLRELRLSLVQSLQRTLATG 580

Query: 574 LNIIGVESPNEM 585
           L+++G+ +P  M
Sbjct: 581 LDLLGIPAPEVM 592


>gi|320450932|ref|YP_004203028.1| arginyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151101|gb|ADW22479.1| arginyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 592

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/596 (21%), Positives = 236/596 (39%), Gaps = 109/596 (18%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ L   P  IAE + AR+ + P V+ V   G G++N  +    L K         +  
Sbjct: 43  LAKELRKPPQAIAEELKARLALPPFVEEVIPVG-GYLNFRIRTKDLLK-------EALRP 94

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                 +   V IE  S NP   +HVGH R   +GD+LA ++ ++G  V    YI+D G 
Sbjct: 95  KEPFPKREGLVLIEHTSVNPNKELHVGHLRNIALGDSLARILDYAGRRVLVLNYIDDTGR 154

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSS--ELLNFPEEKW 229
           Q    A ++F      L  +  +  + +    Y++ H   E  +      E+L+  E   
Sbjct: 155 QA---AETLFALRHYGLTWDGKEKYDHFAGNAYVRLHQDPEYPNLQGGIEEILHALERGE 211

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L    +  + A M      +KALN  +D+ + E D  R     +   +  L +  +V+  
Sbjct: 212 LREDVNRILLAQMAT----MKALNAHYDLLVWESDIVRA--GLLEKALRILEQSPHVFR- 264

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK-- 344
              P + K      MD    +         ++ P   L++S G+ TY+A D+A+   K  
Sbjct: 265 ---PTEGKYAGALVMDASPFI-------PGLEDPYFVLVRSGGAATYYAKDIAFQFWKMG 314

Query: 345 ---------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV------------ 383
                    YE  +   +         Y  R       +  +++                
Sbjct: 315 LLEGLYFQPYENPYYPALRTSAPQGEPYTPRARETINVIDVRQSHPQALVRAALALAGHP 374

Query: 384 --------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
                   L  E V L  +G   +MS R G  +++  V++E                   
Sbjct: 375 ELAEGAFHLAYETVLL--EGK--QMSGRKGLAVSVDEVLEEAERRALAVIEEKNPDHPAK 430

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK 469
                 V   ++RF M+  +  + +DF + +    +    P  YVQYA+AR  SI R+A 
Sbjct: 431 EEAARMVALGAIRFAMVKTEPRKQIDFRYAEALSFEGDTGP--YVQYAHARAHSILRKAG 488

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           + + ++D            ++    E +L + L ++   +  A   + P+ LA YL DL+
Sbjct: 489 E-WGEIDL-----------AQATPYERELALALLDFEEAVLEAAEEKTPHVLAQYLLDLS 536

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++ +++   +      V      L  +RL LV ++   + +GL+++G+ +P  M
Sbjct: 537 ASWNAYYNAKEDGRPATPVLTAPPGLRELRLGLVRSLQETLKTGLSLLGIPAPEVM 592


>gi|325971806|ref|YP_004247997.1| arginyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027044|gb|ADY13803.1| Arginyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 587

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 121/561 (21%), Positives = 232/561 (41%), Gaps = 83/561 (14%)

Query: 61  PLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIG 118
           P  +A  +  RI K+D       +    ++N+ +  + L   LS+++    E YG N   
Sbjct: 62  PPMLAATLKDRIEKLDQRPLGELLVAGPYLNVRIDMAALATSLSALIADKQERYGTNESM 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V IEF   N   P+H+GH R   +G+++A+++  +G  V +   IN+ G  I    
Sbjct: 122 APKRVTIEFSCPNTNKPLHLGHMRNDSLGESVAAILKANGATVRKVNLINNRGVHICKSM 181

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVY---LKHVGKE--LADKYSSELLNFPEEKWLPIV 233
           L+ + ++       +S +   +  G Y        KE   A+  + E+L   E     ++
Sbjct: 182 LA-YQKFGNGETPQNSGIKGDHLVGKYYVKFAQWAKEDPTAEDQAQEMLRQWEAGNEQVI 240

Query: 234 KDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN----LARQGYVY 287
             + +     +  + +    + I  D +  E + ++     I   ++N        G V+
Sbjct: 241 ALWKLMNGWTLDGLSESYIKMGISFDAYYYESETYQYGKDEILKGLENGVFYREEDGSVW 300

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
             + P           +D+K L               L+ DG+  Y   D+     +++ 
Sbjct: 301 VDLEP---------IKLDKKVL---------------LRKDGTSLYMTQDVGTAIMRHKD 336

Query: 348 G-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAG 405
             FD++IYV+ S+   + + L  V A +    AQ ++ L   +V L       KM  R G
Sbjct: 337 WPFDSLIYVVASEQQYHFRVLFYVLAQLGYTWAQDLHHLSYGMVNLPEG----KMKSREG 392

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD-------------FDFCKVKEQSKENPVF 452
             +    +VD + S + R  +  ++   L+D              ++  ++    ++ +F
Sbjct: 393 TVVDADELVDTLTSLA-RKEIEAKEREALVDDVQKTSQSIALGALNYYLLQVTPTKDMIF 451

Query: 453 --------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                         Y+QY  AR  S+ R+ +  + D+    F  +++       + E +L
Sbjct: 452 NPAESISFNGNTGPYLQYMGARISSMLRKYESEYADIRKLSFDSSLLTL-----SDEREL 506

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           I  +A YP V+E A  A +P  L  YLYDL+ +F   W H  +NP L+   A   +L   
Sbjct: 507 IKQIALYPEVVEKAGAALDPSLLCTYLYDLSKLF-SRWYH--DNPILK---AATAELVRS 560

Query: 559 RLQLVHAVASIINSGLNIIGV 579
           R++L   V  ++ +   ++G+
Sbjct: 561 RIELASMVLQVLKNAFGLVGI 581


>gi|302671208|ref|YP_003831168.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316]
 gi|302395681|gb|ADL34586.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316]
          Length = 589

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 123/615 (20%), Positives = 241/615 (39%), Gaps = 108/615 (17%)

Query: 29  LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           L R+ I  RP  C +     N AM  ++  G  P  IA+ + AR++ +   D V     G
Sbjct: 25  LGRVTISNRPDLCEY---QCNGAMAGAKKYGKAPFIIADDVAARLQDNSMFDKVESVKPG 81

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N+ +S  + R  +  ++     +G +         I++   N    +HVGH R AV+G
Sbjct: 82  FLNITVSGDFARGYIVKMLHEK-HFGVDRPAHEPTYIIDYGGPNVAKSLHVGHLRSAVIG 140

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           +++  ++ ++G +V  + ++ D G Q+  +   +  R     Y + +      Y G Y K
Sbjct: 141 ESIKRILKYTGNKVIGDAHLGDWGLQMGLVITELEVRKPDLCYFDPN------YEGPYPK 194

Query: 208 HVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI-------------------- 244
                 +EL + Y +      E++     K  ++ A  K+                    
Sbjct: 195 EAPFTVEELGEIYPAASAKSKEDEAF---KAKAMDATKKLQDGYKPYRALWHHIMNVSLA 251

Query: 245 -IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            ++ + K LN+  D++  E D    DP  I  +++ +   GY +E               
Sbjct: 252 DLKKNYKNLNVNFDLWKGESD---ADPV-IPGMVEYMKSHGYAHES-------------- 293

Query: 304 MDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359
             +  L+       D  + P   +LKSDG+  Y   DLA  K + +    + +IYV+   
Sbjct: 294 --QGALVVDVAEETDTKEVPPCMILKSDGASLYNTTDLATIKQRMDDNHPEGIIYVVDKR 351

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVG 418
              Y  ++   A        +  +       +  +DG P K   RAG  + L  ++ E+ 
Sbjct: 352 QELYFTQVFRCARKTKLVMPETELHFVGFGTMNGKDGKPFKT--RAGGVMPLGDLIAEI- 408

Query: 419 SDSVRFMMLWRKNSELLD--------------FDFCKVKEQSKENPVF------------ 452
            D   +  +   N E+ +                +  +  Q  ++ +F            
Sbjct: 409 -DDKMYNRIKEGNPEMPEDEAKDTSHKIALSALKYGDLSNQPSKDYIFDIEKFTSFEGDT 467

Query: 453 --YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ Y   R +SI ++ +    ++   L      P   E       L++ L  +   IE
Sbjct: 468 GPYILYTMVRIKSILKKYEAEGGNVKEALLANPDSPAMKE-------LMLQLTRFADAIE 520

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P ++  Y+YDL++ F+  + HG +       +A+  K +   + L+     ++
Sbjct: 521 GAAKDFAPNRICAYIYDLSNAFNSFY-HGTK----ILAEADPDKKSSY-IALLATTLKVL 574

Query: 571 NSGLNIIGVESPNEM 585
            +G++++G ++P  M
Sbjct: 575 ETGIDLLGFDAPERM 589


>gi|212527372|ref|XP_002143843.1| arginyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210073241|gb|EEA27328.1| arginyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 653

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 239/569 (42%), Gaps = 106/569 (18%)

Query: 89  INLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNIEFVSANPTGPMH 137
           +  +  P  L K ++S I+ +   YG N  +G        KG K V +EF S N   P H
Sbjct: 119 LQFFFKPGPLTKTVISRILENKSTYGTNGNLGLRDPSDPSKGKKKVIVEFSSPNIAKPFH 178

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD 195
            GH R  ++G  +A+L   +G+EV R  Y+ D G Q   LA + F RY  ++AL  +   
Sbjct: 179 AGHLRSTIIGGFIANLFTITGWEVIRMNYLGDWGKQYGLLA-NGFERYGSEEALLKD--- 234

Query: 196 LPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            P  +   VY+K + K++A      K   E +   +EK   +  + +  + +    DD K
Sbjct: 235 -PINHLFDVYVK-INKDMAVQEGPIKELRETIKQKKEKNEDVSAEEAELSKLVDASDDEK 292

Query: 251 ALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGY--------VYEG---ILPP 293
           A       F S +D   GDP  +      RD+     +Q Y        VY G   +LP 
Sbjct: 293 A----RRYFKSMED---GDPKALALWKRFRDLSIEKYKQIYARLNIDFDVYSGESQVLPE 345

Query: 294 P---------KSKTTQKCD----MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
                     KS  ++K +    +D  +  F+   +G  +   +++ DG+  Y   D+  
Sbjct: 346 SLKKAYETMEKSGVSEKSEGAVIVDFTKHKFKK--LGKAI---VIRKDGTPLYLTRDIGA 400

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV----------- 383
              ++++  FD MIYV+ +    ++ +L  V        +++K   IN            
Sbjct: 401 IVERHDKYQFDKMIYVVANQQDLHLAQLFKVTELMGHKDIADKCQHINFGMVRGMSTRKG 460

Query: 384 ---LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDF 437
               L +++R   D M   M +    ++ +       D +G  +V    +  K     DF
Sbjct: 461 TVKFLDDILRDVADKMHEVMKRNEDKYVQVDDPLATSDTLGITAVMVQDMSGKRVNGYDF 520

Query: 438 DFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           +   +   +    P  Y+QYA+AR  SI R+A +I P+ D      +++ ++   D    
Sbjct: 521 NLEAMTSFEGDTGP--YLQYAHARLSSIIRKA-EINPE-DLPKADLSILTEQHAID---- 572

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L  +LA++P V+ N     EP  +  YL+ +  +    +        LR V     K+ 
Sbjct: 573 -LARYLAQWPDVVLNTVKTLEPTTVLTYLFRMTHMLSSSYD------ILRIV-GREEKVA 624

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + R+ L  +   ++ +G+ ++G+     M
Sbjct: 625 LARMALYASARQVLYNGMKLLGLNPVERM 653


>gi|2632103|emb|CAB11467.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 589

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 120/530 (22%), Positives = 215/530 (40%), Gaps = 91/530 (17%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + ++  +     V+S  IAG GF+N+ LS  ++ K + +++V GI+     +   
Sbjct: 70  PPAVGQALIQSLPTSEMVESCSIAGPGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188

Query: 181 VFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           +F ++   +        DL   Y        +  E  +K    ++    +   P+ +   
Sbjct: 189 LFEKFPDTESVTETAIGDLQVFYRESKLKFDLNPEFKEKAQQAVVRL--QGGDPVYRQAW 246

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + + +I R++   +  +  I + E      +P  I ++I+ L+ +G V E       SK
Sbjct: 247 AK-ICEISRNEFAKVYKRLRIELEEKGESFYNPY-IANVIEELSSKGLVEE-------SK 297

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA------------------ 339
                     +++F   + G  +   ++KSDG + Y + DL                   
Sbjct: 298 GA--------RVIF---IEGFKIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVT 346

Query: 340 ----------YFKCKYERGF---DNMIY----------VMGSDHSGYVKRLEAVAAAVSE 376
                     +FK   + G+   D+  Y          V+G D+    KR    AA V  
Sbjct: 347 DVGQQQHFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDN----KRFRTRAAEV-- 400

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGSDSVRFMMLWRKNS 432
                 V L +L+   +D     + +R  D       L  + + VG  ++++  L     
Sbjct: 401 ------VRLADLLDEAKDRSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTNRI 454

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++     +  V Y+ YA+AR  SI R++     D+D +L     I  +    
Sbjct: 455 TGYTFSFDQMLNDKGDTAV-YLLYAHARICSIIRKSGK---DID-ELKKTGKIALDH--- 506

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            +E  L +HL ++   +E A     P  L  YLY L+  F   +S+ + N
Sbjct: 507 AAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQVN 556


>gi|298480089|ref|ZP_06998288.1| arginine--tRNA ligase [Bacteroides sp. D22]
 gi|298273898|gb|EFI15460.1| arginine--tRNA ligase [Bacteroides sp. D22]
          Length = 605

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 129/607 (21%), Positives = 244/607 (40%), Gaps = 139/607 (22%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   +   
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114

Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           +  V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L
Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226
           +  W+     Y N  + PE          G Y   + KH     KEL  K++++ ++  E
Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDE 227

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     K  +   +M+  R+ L               +  GDP  +R + + +    +V
Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317
           Y G       +T +K  +   ++ + S                              +  
Sbjct: 268 YAGF-----DETYKKMGVGFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322

Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   + 
Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            +  +  V     +    +G   KM  R G  +    +++E                   
Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A +        +     IP   E    E  LI  +A++  V++ A     P
Sbjct: 491 ARIQSVLRKAAE------SGIVISEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSP 544

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N++G
Sbjct: 545 SIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMNLLG 598

Query: 579 VESPNEM 585
           +E P+ M
Sbjct: 599 IEVPSRM 605


>gi|312066682|ref|XP_003136386.1| arginyl aa-tRNA synthetase 1 [Loa loa]
 gi|307768450|gb|EFO27684.1| arginyl aa-tRNA synthetase 1 [Loa loa]
          Length = 513

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 201/453 (44%), Gaps = 79/453 (17%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           +AG G+IN++L+ +++   +++I + GIE     + +  +V ++F S N    MHVGH R
Sbjct: 72  VAGPGYINIFLNKNWIAASIANIALKGIEIP---VIEKRRVVVDFSSPNIAKQMHVGHLR 128

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD+++ L+ + G++V R  +I D G Q   L   +    Q    N  +++P    P
Sbjct: 129 STIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHL----QDCFPNFINEVP----P 180

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVK------DY--SVQAMMKIIRDDLKALNI 254
              L+   KE   ++  +   F    +  + K      DY  + Q +  + R D   +  
Sbjct: 181 ISDLQTFYKESKKRFDED-EAFKARAYQCVTKLQSFDPDYVKAWQMICDVSRKDFNQIYD 239

Query: 255 QHDIFISE--DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +  I I E  + F++     + + +D L        G+L           ++D  + + R
Sbjct: 240 RLGITIVERGESFYQKHMIELVEELDKL--------GVL-----------ELDEGRKILR 280

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYV------- 364
              VG  V   ++KSDG++TY  +DLA  K + +    D +IYV+ +  S +        
Sbjct: 281 ---VGGRVPLTVVKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVDAGQSLHFELVYAAG 337

Query: 365 ----------KRLEAVAAA--VSEKKAQINVLLCELVR---LYRDGMP---IKMSKRAGD 406
                     KR+E V+    + E K +      + VR   L  +G+    IK+ ++  D
Sbjct: 338 QKLGWYSQTEKRVEFVSLGLVLGEDKKKFKTRSGDTVRLTDLLDEGVKRAEIKLQEKERD 397

Query: 407 FITLRHVV----DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            + +   +    D V    V++  L +  ++   F F ++ +  + N   Y+ YA+AR +
Sbjct: 398 KVMISEELTLARDAVAYGCVKYADLSQTRTQDYVFSFDRMLD-DRGNTAVYLLYAFARIK 456

Query: 463 SIFRQAKDIFPDLDFDL--FPRNVIPQE--SEF 491
           SI R       D+   L   P  V+P E  SEF
Sbjct: 457 SICRNTGVSDEDIHNYLCSLPNGVLPLEHKSEF 489


>gi|325268661|ref|ZP_08135291.1| arginine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989189|gb|EGC21142.1| arginine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 606

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 120/566 (21%), Positives = 226/566 (39%), Gaps = 106/566 (18%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ +    +L+ I        + +      V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G +LA +M  +G +V +   +ND G  I    L+ + ++   +    +     +  G +
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WLKWGNGITPEKAGKKGDHLIGDF 199

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                K   ++       + +E   P            +I++        H++ +    +
Sbjct: 200 YVLFDKHFKEECRQLQEQYEKEGMTPDAAKEKAGQEAPLIKE-------AHEMLVK---W 249

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT----TQKCDMD-RKQ 308
            +GDP  +R + + +    +VY G     K            S T     +K +    K 
Sbjct: 250 EQGDPE-VRALWEKM--NSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKKVEEGLEKG 306

Query: 309 LLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
           L FR       + +  + +D+ LL + DG+  Y   D+   + ++ +   D MIYV+G++
Sbjct: 307 LFFRKDDNSVWADLTKEGLDQKLLLRKDGTSVYMTQDIGTAEMRFNDFPIDKMIYVVGNE 366

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            + + + L  +   +  K  +  V     +    +G   KM  R G  +           
Sbjct: 367 QNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVDADDLVASMIE 423

Query: 409 -----------TLRHVVDE--------VGSDSVRFMML---WRKN-----SELLDFDFCK 441
                       L  + +E        VG  ++++ +L    RKN      E +DF+   
Sbjct: 424 NAKKLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNMLFNPEESIDFN--- 480

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
                  N   ++QY YAR RSI R+  A+DI       L P + +  ++  +  E++LI
Sbjct: 481 ------GNTGPFIQYTYARIRSILRKAAAQDI-------LLPAS-LADDAPLNEKEIELI 526

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L ++   +  A I   P  +A Y Y+L   F+  +           + A+     + R
Sbjct: 527 QKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD------YSILSADTEAEKITR 580

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L   VA +I +G+ ++G+E P  M
Sbjct: 581 LVLAKNVAKVIRNGMALLGIEVPERM 606


>gi|148927123|ref|ZP_01810752.1| Arginine--tRNA ligase [candidate division TM7 genomosp. GTL1]
 gi|147887417|gb|EDK72862.1| Arginine--tRNA ligase [candidate division TM7 genomosp. GTL1]
          Length = 530

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 210/546 (38%), Gaps = 105/546 (19%)

Query: 84  AGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A  GF+N+ L SP      LS+   +   Y      K   V  E+   NP   +H GH  
Sbjct: 46  AVSGFVNIRLKSPVLTEAALSAPEFTPESY------KDKVVVAEYSDPNPFKVLHAGHLY 99

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             +VGD++A+L+  +G  V R  Y  D G  +     S+                     
Sbjct: 100 TTIVGDSIAALVEAAGARVHRINYGGDVGLHVGRAMWSI--------------------- 138

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA--LNIQHDIF- 259
              ++H+G E  +K   E+       W  + + Y          D  KA  + I   ++ 
Sbjct: 139 ---IRHLGGEYPEKLR-EVSTHERASW--VSRRYVEGTTAYETNDKAKAEIVEINKRVYK 192

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGY--VYEGI-LPP-----PKSKTTQKC--------- 302
           + ED+ H    + +       +  G+  +Y+ + + P     P+SK T K          
Sbjct: 193 LHEDNDHESSFAEVYWTCRQWSYDGFDAMYDRLQITPFEAYWPESKVTPKGIEIVQQGLK 252

Query: 303 ----DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
               +      +F++   G    R  L SDG  TY A DL     K++   FD  I +  
Sbjct: 253 DAIFEESNGATIFKAEEYGLHT-RVFLNSDGIPTYEAKDLGLAALKWQTFHFDKSIIITA 311

Query: 358 SDHSGY----VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +D   Y    +K LE     V+E+   +   L +L      G   KMS R G+ +    +
Sbjct: 312 NDIVDYMKVVLKALEHFYPEVAERSTHLTHGLIKLP----GGK--KMSSRKGNTLLAADI 365

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYA 459
           ++     +    +     + L    +  +K++   + V+              Y+QYA+A
Sbjct: 366 LEAAAEAATNSTIDESHGTVLAAVKYAFLKQRIGGDIVYEPEESVSLEGNSGPYIQYAHA 425

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R   I R+A+            +++    +  D +E +L   + +YP V+        P+
Sbjct: 426 RACGILRKAQ------------KSIEVSITTLDETERELARKIGQYPTVLTETVDTLRPH 473

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YLY+LA  F+  +   R       +  + R+    RL LV A A ++ +GL ++ +
Sbjct: 474 HICTYLYELAQAFNRFYEKSR-------IVGSEREAE--RLMLVRAYAGVLKNGLAVLRI 524

Query: 580 ESPNEM 585
            +P  M
Sbjct: 525 TAPERM 530


>gi|238810261|dbj|BAH70051.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 553

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 103/542 (19%), Positives = 228/542 (42%), Gaps = 52/542 (9%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
            H+  +    L +   +  + +AE I  R+  D  V  V I   G +++ L+   L  ++
Sbjct: 63  NHIECDIVFQLKKFSFIPYIELAEEIKKRLIKDSMVKDVTIDRYGLLHIVLNEKDLVSVV 122

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + ++    +YG+       KVNIE+ SA+P   + + + R A+VG+T+A ++ + GY+VT
Sbjct: 123 NEVIKKAYKYGQEK-KNNIKVNIEYTSASPLNSLTLMNARNALVGETIARILEYLGYQVT 181

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           RE+ +     ++  ++  V  +Y      ND+ +          K++  +  D Y     
Sbjct: 182 REFLVYPGLKKMEKVSQIVHEQYVNLFELNDNSIKVDKDILECAKNIKAQNGDLYLDIND 241

Query: 223 NFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                K+ L IV  +  ++     +  LK L +  DI    +D        +++ ID + 
Sbjct: 242 TIKRNKFDLAIVFYFLNKS-----KKQLKNLGVFFDIVSYFEDI------LVKEKIDKVL 290

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                   +L P           D    L  +T + D  +R L+  +G+ +Y   D+ Y 
Sbjct: 291 E-------LLSP--------FIYDNDSNLILNTNLDDSKERILVHRNGTSSYLLLDIIYH 335

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
             K +R  D +I ++ ++H+ Y   L +    ++     I++  CE  ++  +     M+
Sbjct: 336 LEKLKRA-DWIIDILDANHTQYSHSLISALKFLNAYNNNIDIAFCENFQIKENNEVKSMT 394

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  + I +  +V +V  + ++F  L +     +  +   + ++   +   ++   Y + 
Sbjct: 395 EKNQNVIFIDELVKKVNLNEIKFFFLEKSTKHQITIEKEILNQKKISHNFDFILNTYNKI 454

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             +  ++K+       +    N + Q +       +LI+ L  +P V+        P+ L
Sbjct: 455 NKLLDESKN-------NKCYCNKMNQNNFLS----KLILRLDYFPYVLRKVIKTLNPFYL 503

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL ++  + + +     +     F              ++ AV ++ ++GLN++G++ 
Sbjct: 504 TKYLKEMCYLINQNLKDKLKKDYRNFY------------PILEAVKNVFDNGLNLLGIDF 551

Query: 582 PN 583
            N
Sbjct: 552 KN 553


>gi|182417146|ref|ZP_02948519.1| arginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668885|ref|ZP_04528869.1| arginine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378988|gb|EDT76494.1| arginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657233|gb|EEP54789.1| arginine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 562

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 122/531 (22%), Positives = 212/531 (39%), Gaps = 90/531 (16%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    + +  L+ ++  G  YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YLNFFVDKGVFAKNTLNKVLEEGDNYGASNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G++L  +    GY      ++ D G Q   L +S +  W  ++AL       P      +
Sbjct: 137 GNSLYKMFKKEGYNTVGLNHLGDWGTQFGKL-ISAYNRWVDEEAL----EKAPIDELLRI 191

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK-DYSVQAMMKIIRD-DLKALNIQHDIFISE 262
           Y+K    E A K  S L +     +  +   D    A+    RD  LK     +DI   +
Sbjct: 192 YVKF--HEEAKKDPS-LEDEARANFKALENGDAEATALWNRFRDLSLKEFERVYDILDVK 248

Query: 263 DDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            D   G+      +  ++D L  +G + E       S   Q              ++ +D
Sbjct: 249 FDSLNGEAFYNDKMDVVVDELKEKGLLVE-------SNGAQ-------------VVMLED 288

Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
            + P   +LK+DG+  Y   DLA   Y K  Y+  F   +YV+G+  + + K++  V   
Sbjct: 289 YNMPPCIVLKADGASIYATRDLAAAMYRKKTYD--FHKCVYVVGTPQALHFKQVFKVLDL 346

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL----------------------- 410
              + A+  V +   +  + D    K+S R G  + L                       
Sbjct: 347 AGHEWAKDCVHVGFGLVKFADR---KLSTRDGSIVLLDDLLREAVEKTMEAIKDKEEIKN 403

Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA 468
              V  ++G  +V F  L     + + FD+ ++   + +  P  YVQYAYAR  SI  +A
Sbjct: 404 KEEVAKKIGVGAVIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYAYARGNSILERA 461

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            +    +D+                 E +L+  L  +  VI  A    EP  L  Y+ ++
Sbjct: 462 GEFSGSIDYSKLS----------SKEEFELVKSLGNFNNVITLALDKLEPSILTRYVIEV 511

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           A  F+  ++          +   + +L   RL LV A   +I +GL ++G+
Sbjct: 512 AKGFNKFYNAH------SVLNLEDEELKRARLNLVKASLQVIKNGLELLGI 556


>gi|218295699|ref|ZP_03496495.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243858|gb|EED10385.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 592

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 135/609 (22%), Positives = 240/609 (39%), Gaps = 135/609 (22%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ L   P TIAE + +R+++ P V+     G G++N  L    L  +  ++   G   
Sbjct: 43  LAKELRKPPQTIAEELKSRLELPPFVEEAIPVG-GYLNFRLRTEDL--LEEALRPKGPFP 99

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            R  +     V IE  S NP   +HVGH R  V+GD+LA ++ ++G EV    YI+D G 
Sbjct: 100 KREGL-----VLIEHTSVNPNKELHVGHLRNIVLGDSLARILDYAGREVLVLNYIDDTGR 154

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPE-E 227
           Q    A ++F      L  +                 GKE  D ++      L   PE E
Sbjct: 155 QA---AETLFALRHYGLTWD-----------------GKEKYDHFAGRAYVRLHQDPEYE 194

Query: 228 KWLPIVKDYSVQAMMKIIRDD-----------LKALNIQHDIFISEDDFHRGDPSPIRDI 276
           K  P +++         +R++           + AL   +D+ + E D  R     ++  
Sbjct: 195 KLQPAIEEVLHALEQGELREEVNRILLAQMATMHALAAHYDLLVWESDIVRA--GLLKKA 252

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTY 333
           +  L +  +V+     P + K      MD    +         ++ P   L++S G+ TY
Sbjct: 253 LAILEQSPHVFR----PTEGKYAGALVMDASPFI-------PGLEDPYFVLVRSGGAATY 301

Query: 334 FAADLAYFKCK-----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +A D+A+   K           YE  +   +     +   Y  R +     +  +++   
Sbjct: 302 YAKDIAFQFWKMGLLEGLPFRPYENPYYPHLRTSAPEGEPYTPRAQETINVIDVRQSHPQ 361

Query: 383 V--------------------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
                                L  E V L  +G   +MS R G  +++  V++E      
Sbjct: 362 ALVRAALALAGRPDLAQRAFHLAYETVLL--EGK--QMSGRKGLSVSVDEVLEEARRRAL 417

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456
                              V   ++RF M   +  + +DF + +    +    P  YVQY
Sbjct: 418 AVISEKNPDHPDKEEAARMVALGAIRFAMSKTEPRKQIDFRYQEALSFEGDTGP--YVQY 475

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  +I R+A +  P            P  ++    E +L + L ++   +  A   +
Sbjct: 476 AHARAHAILRKAGEWGP------------PDPAQATPYERELALALLDFEEAVLEAAEEK 523

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+ LA YL DLA+ ++ +++   E      V      L  +RL+LV ++   + +GL +
Sbjct: 524 SPHVLAQYLLDLAAAWNAYYNAKEEGRPATPVLTAPEGLRELRLELVRSLQETLKTGLGL 583

Query: 577 IGVESPNEM 585
           +G+ +P  M
Sbjct: 584 LGIPAPEVM 592


>gi|19173381|ref|NP_597184.1| ARGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621147|sp|Q8SRD8|SYR_ENCCU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19170970|emb|CAD26360.1| ARGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 563

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 113/518 (21%), Positives = 207/518 (39%), Gaps = 101/518 (19%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G N +GKG ++ +E+ S N     H+GH R  V+G  + +L+  SGYE T   Y  D G
Sbjct: 103 FGNNNVGKGKRMVVEYSSPNIAKIFHIGHLRTTVLGQFIVNLLRASGYETTSINYFGDWG 162

Query: 172 AQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKEL----ADKYSSELLNF 224
            Q   + L        + Y ++ +L   P  +   VY+K           D  + E+   
Sbjct: 163 KQFGFVLLGY------SKYGSEEELEKDPLKHLFNVYVKISADAEKNPDVDSEAKEIFRM 216

Query: 225 PEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            EE   +W   +     +  ++  +   K LN++ D++  E  ++    S +        
Sbjct: 217 MEEDKDEWCMNLWRRFRELSIEKYKVLYKRLNVEFDVYSGESMYNEKGKSIV-------- 268

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                        ++    K D D  ++      +G      ++K+DG+  Y   D+A  
Sbjct: 269 -------------ETSKQIKTDEDGSKVF----DLGKAGKVLVMKNDGTTLYITRDIAAA 311

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             + E    + +IYV+ S+ + + + L  V   +   K +   +          G+   M
Sbjct: 312 IERLEEYSPEKIIYVVSSEQNKHFEDLFGVLEMLGYDKDKFQHVSY--------GLVAGM 363

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN------------------SELLDFDFCKV 442
           S RAG    L  ++ E  ++ ++ +M+   N                  S LL  DF   
Sbjct: 364 STRAGKVQLLEDIIQE-STEVMKNVMMSDNNKGSFTAAEMDQTAEVLAISTLLVMDFTAR 422

Query: 443 KEQSKENPV-----------FYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQ 487
           + +  E  +            Y+QYA+ R RSI  +  ++       +DF+L     +P+
Sbjct: 423 RVKGYEFDIEKRARNTSGTGLYLQYAHCRLRSIETKNSNVDYNDIETIDFELIH---VPK 479

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                   L L+  L  +  V+E      EP ++  YL DLAS  +G  +  R       
Sbjct: 480 -------VLNLVYKLLWFEHVVEKCLEDYEPSRIVTYLQDLASSINGAINILR------- 525

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V   +++L   RL ++ +   ++++GL I+G    N+M
Sbjct: 526 VLGVDKELARARLLVLSSARIVLHNGLRILGATPLNKM 563


>gi|294669637|ref|ZP_06734704.1| hypothetical protein NEIELOOT_01538 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308550|gb|EFE49793.1| hypothetical protein NEIELOOT_01538 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 450

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++  HG    N  M  ++    +P  +A+ +  ++  +  ++S  +AG GFINL
Sbjct: 43  IVLQPTKNAEHGDYQINGVMAAAKRHNRNPRELAQQVADKLSGNHVIESAEVAGPGFINL 102

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + LS  + SG   G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 103 RLRADFLAQNLSHALHSG-HLGIRKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 161

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 162 RVLEFMGNTVIRQNHVGDWGTQFGML 187


>gi|145641731|ref|ZP_01797307.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273545|gb|EDK13415.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 419

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 2/135 (1%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++ LGL+P   A+ ++   ++    + + IAG GFIN++L+P++L   +
Sbjct: 37  GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           S+  +S    G     K T V I++ S N    MHVGH R  ++GD +A  + F G+ V 
Sbjct: 97  SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTL 177
           R  ++ D G Q   L
Sbjct: 155 RANHVGDWGTQFGML 169


>gi|157137800|ref|XP_001664040.1| arginyl-tRNA synthetase [Aedes aegypti]
 gi|108869646|gb|EAT33871.1| arginyl-tRNA synthetase [Aedes aegypti]
          Length = 557

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 119/502 (23%), Positives = 200/502 (39%), Gaps = 86/502 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  IEF S N   P H GH R A++G+ LA++    G++V +  Y+ D G Q   L + V
Sbjct: 104 KTLIEFSSPNIAKPFHAGHLRSAIIGNFLANIYHHLGHDVVKLNYLGDWGTQFGFLKMGV 163

Query: 182 FWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV------ 233
             +   ++ +  N   +    Y   Y +    E     +  + +  E+  L  +      
Sbjct: 164 ELKGLSREDIRKNPIKMLYKAYVYAYTQASTNEELQSRARTIFSDMEQGKLKDLDGWTDY 223

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + Y+V  + K+       L I  D +  E  +  GD   I  ++  L   G +       
Sbjct: 224 RSYTVDELRKV----YDRLGITFDQYHWESQYGIGD---IAHVVSRLQENGLL------- 269

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
                TQ  D  RK +      +      P++KSDGS  Y   D+A    +++R  FD  
Sbjct: 270 ----ITQ--DDGRKVVKVGPRNI------PIVKSDGSTLYLTRDIAALIDRHQRFTFDKA 317

Query: 353 IYVMGSDHSGYVKRLEAVAA-------------------AVSEKKAQ---INVLLCELVR 390
           IYV+ +  S +   L ++A                     +S +K     ++ +L E   
Sbjct: 318 IYVVDNAQSDHFAALASIAQQMGLPYASDIVHVKFGRVHGMSTRKGNAVFLSDILDEAEA 377

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449
           L R    +K S    D I    V   +G+ +V    L  K   + D+DF   K  Q+  +
Sbjct: 378 LMRHKQ-VKKSTTKVDVINNPEVTSTLGTTAVVVNDL--KQRRMRDYDFSWDKALQTDGD 434

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
               +QY + R  S+ + A +  PD +    P+ ++P+        L LI  +A Y  ++
Sbjct: 435 CGIKLQYTHCRLWSLVKNADECCPD-NEQCQPK-LLPE-----PEALHLICEIANYDGIL 487

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN------RKLTMMRLQLV 563
             A   QE   L  YL+ L             N   R VQ  N      ++  + RL+L 
Sbjct: 488 TEAADKQEACILVNYLFGLC------------NAANRCVQTMNVKNELSKEKRIQRLKLF 535

Query: 564 HAVASIINSGLNIIGVESPNEM 585
           +   S++  G+ I+G++   EM
Sbjct: 536 NTARSVLQHGMQILGLKPLLEM 557


>gi|308190281|ref|YP_003923212.1| arginine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777675|ref|YP_004137326.1| arginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307625023|gb|ADN69328.1| arginine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038750|gb|ADV34949.1| Arginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 543

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 103/542 (19%), Positives = 228/542 (42%), Gaps = 52/542 (9%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
            H+  +    L +   +  + +AE I  R+  D  V  V I   G +++ L+   L  ++
Sbjct: 53  NHIECDIVFQLKKFSFIPYIELAEEIKKRLIKDSMVKDVTIDRYGLLHIVLNEKDLVSVV 112

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           + ++    +YG+       KVNIE+ SA+P   + + + R A+VG+T+A ++ + GY+VT
Sbjct: 113 NEVIKKAYKYGQEK-KNNIKVNIEYTSASPLNSLTLMNARNALVGETIARILEYLGYQVT 171

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
           RE+ +     ++  ++  V  +Y      ND+ +          K++  +  D Y     
Sbjct: 172 REFLVYPGLKKMEKVSQIVHEQYVNLFELNDNSIKVDKDILECAKNIKAQNGDLYLDIND 231

Query: 223 NFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                K+ L IV  +  ++     +  LK L +  DI    +D        +++ ID + 
Sbjct: 232 TIKRNKFDLAIVFYFLNKS-----KKQLKNLGVFFDIVSYFEDI------LVKEKIDKVL 280

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                   +L P           D    L  +T + D  +R L+  +G+ +Y   D+ Y 
Sbjct: 281 E-------LLSP--------FIYDNDSNLILNTNLDDSKERILVHRNGTSSYLLLDIIYH 325

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
             K +R  D +I ++ ++H+ Y   L +    ++     I++  CE  ++  +     M+
Sbjct: 326 LEKLKRA-DWIIDILDANHTQYSHSLISALKFLNAYNNNIDIAFCENFQIKENNEVKSMT 384

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  + I +  +V +V  + ++F  L +     +  +   + ++   +   ++   Y + 
Sbjct: 385 EKNQNVIFIDELVKKVNLNEIKFFFLEKSTKHQITIEKEILNQKKISHNFDFILNTYNKI 444

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             +  ++K+       +    N + Q +       +LI+ L  +P V+        P+ L
Sbjct: 445 NKLLDESKN-------NKCYCNKMNQNNFLS----KLILRLDYFPYVLRKVIKTLNPFYL 493

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL ++  + + +     +     F              ++ AV ++ ++GLN++G++ 
Sbjct: 494 TKYLKEMCYLINQNLKDKLKKDYRNFY------------PILEAVKNVFDNGLNLLGIDF 541

Query: 582 PN 583
            N
Sbjct: 542 KN 543


>gi|156084636|ref|XP_001609801.1| arginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797053|gb|EDO06233.1| arginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 581

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 123/583 (21%), Positives = 219/583 (37%), Gaps = 122/583 (20%)

Query: 43  GHLSTNAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N A+ L + +G       P  +AEL+ + I       +V ++ +GF+ + LS  +
Sbjct: 42  GDFQWNDAISLYKAIGSTLQVGSPKELAELVKSHIS-SSTFSAVNVSPQGFLTVTLSKEF 100

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   +  +   G+   +    KG +V ++F S N    MHVGH R  ++G++L+ ++ F 
Sbjct: 101 IEGEIRHLYKHGVSVPQA--PKGFRVAVDFSSPNIAKEMHVGHLRSTIIGESLSRILEFH 158

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
           GY+V R  ++ D G     L                     + F++  +AL + D++   
Sbjct: 159 GYDVLRINHLGDWGTHFGMLVEYMLAKHPDFMTNVPSISDFTQFYKEAKALMDADAEFKA 218

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQH 256
                V L   G EL+      L    E ++  I K  D +++   +   +D+       
Sbjct: 219 RSRKRVVLLQSGDELSINVWKLLCQISEREFAKIYKMLDITIENCGESFYNDM------- 271

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                           I D+++ L  +  V E                +  Q +F S   
Sbjct: 272 ----------------IPDVVNELKEKDLVVES---------------EGAQCVFTSV-- 298

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG-SDHSGYVKRLEAVAAAV 374
              V    +KSDGSY Y + DLA  + + +  G   +IYV        ++K  E    A 
Sbjct: 299 -SSVPLMAIKSDGSYGYDSTDLACIRYRIKTLGSKWLIYVTDVGQQEHFMKVFETARLAG 357

Query: 375 SEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
             K    ++ +  L   + +D    K   R+GD + L  ++DE                 
Sbjct: 358 WSKVDGQDIRIDHLGFGMVQDSSGNKFKTRSGDTVKLITLLDEAVSRATVELESRIKARQ 417

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            +G  +V++  L +  +    F F  + +  + N   Y+ YAYA
Sbjct: 418 EEGETEIDINVPEVAKVLGYGAVKYFELRQNIANNYKFSFDHMLD-PRGNTAIYLLYAYA 476

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEP 518
           R   IF +A          + P  + P+  +     E+ L  H+ + P V+   T     
Sbjct: 477 RICQIFHKA---------GIDPETLQPELLDLVHPLEISLAKHILKLPAVLHQITADFLI 527

Query: 519 YKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTM 557
            KLA ++Y L+  F   +      G  N + R +  +  K  M
Sbjct: 528 SKLADFVYALSVEFSSFYKQCKVIGDPNEKTRLLLCHATKTVM 570


>gi|149002907|ref|ZP_01827818.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758910|gb|EDK65905.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 397

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 62/300 (20%)

Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           ++ P L  KSDG+  Y   DLA   Y K +Y+  F   IYV+G + S + K+L+AV   +
Sbjct: 126 IEHPALIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEM 183

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
               +  ++       + ++G   K+S R G+ I L   V E                  
Sbjct: 184 GYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELEN 240

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                  VG  +++F  L    +   DFD    V  + +  P  YVQYAYAR +SI R+A
Sbjct: 241 KDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 298

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F        S  DT   ++I  + ++PR+I  A    EP  +A +   L
Sbjct: 299 D----------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISL 348

Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R   E+P               RL L +A A ++   L ++GVE+P +M
Sbjct: 349 AQSFNKYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 397


>gi|255534410|ref|YP_003094781.1| arginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340606|gb|ACU06719.1| Arginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 595

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 214/516 (41%), Gaps = 84/516 (16%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   V IE+ S N   P+H+GH R  ++G ++A ++   GY V +   IND G  I   
Sbjct: 116 AKNQTVMIEYSSPNTNKPLHLGHIRNNLLGYSVAEILKADGYNVVKTQIINDRGIHICKS 175

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIV 233
            L+ + RY +      + L      G Y     K   KE+A+  +        +K  PI+
Sbjct: 176 MLA-WQRYGEGSTPASTSLKGDKLVGNYYVEFDKTYKKEIAELVAQGKSEDEAKKEAPII 234

Query: 234 KDYSVQAMMKIIRDDLKALNIQHD----IFISED--------DF----HRGDPSPI-RDI 276
           K+ + Q ++   ++D K   +  +    ++   D        DF    +  D   + +DI
Sbjct: 235 KE-AQQMLLSWEKNDEKVRELWKEMNTWVYAGFDQTYKRLGVDFDQVQYESDTYILGKDI 293

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I      G +Y       +   +  CD+  +         G D ++ LL+SDG+  Y   
Sbjct: 294 IQQGLLTGALYR------REDGSVWCDLRDE---------GID-EKLLLRSDGTSVYMTQ 337

Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYV----KRLEAVAAAVSEKKAQINVLLCELVR- 390
           DL     ++ +     +IY +G++   +     K L+ +  + +E    ++  + EL   
Sbjct: 338 DLGTAVQRFKDNDIQKLIYTVGNEQDYHFNVLFKILKKLGYSWAENLYHLSYGMVELPEG 397

Query: 391 --LYRDGMPI-----------KMSKRAGDFITLRHVVDE--------VGSDSVRFMMLWR 429
               R+G  +              ++A D   L ++  E        VG  ++++ ML  
Sbjct: 398 KMKSREGTVVDADDLMQEMYETAKEKAEDLGKLENLTIEEKEKSYETVGIGALKYFMLKV 457

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + + F+  K   +   N   ++QY YAR +S+  +A         D   R V   E 
Sbjct: 458 DPRKKMLFN-PKDSVEFNGNTGPFIQYTYARIQSLLAKA---------DYQDRKVT--EY 505

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           E   SE  LI+++A +  VI  A     P  LA Y+YDL   ++  + +   NP L    
Sbjct: 506 EMSDSEKDLIMNIAAFKDVISKAADTLSPALLANYIYDLVKSYNSFYQN---NPILIQED 562

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N R+    RL+L    A II  GL ++G+E+ + M
Sbjct: 563 QNMRQF---RLELSDLTAKIIKKGLKMLGIETVDRM 595


>gi|220909041|ref|YP_002484352.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782957|sp|B8HSK8|SYR_CYAP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219865652|gb|ACL45991.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 585

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G   +NA + L++ L   P TIA  IV  +++    +   IAG GFIN  L  SYL   L
Sbjct: 40  GDYQSNAPLPLAKQLNQPPRTIASTIVDHLEVGEAWEPPTIAGPGFINFTLKTSYLASQL 99

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             + ++    G + +    +V ++F S N    MHVGH R  ++GD LA ++ F G+EV 
Sbjct: 100 E-LRLTDPRLGISAVKLPLRVVVDFSSPNIAKEMHVGHLRSTIIGDCLARILEFLGHEVL 158

Query: 163 REYYINDAGAQINTL 177
           R  ++ D G Q   L
Sbjct: 159 RLNHVGDWGTQFGML 173



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 52/299 (17%)

Query: 322 RPLL--KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           +PL+  KSDG Y Y   DLA  + + E+   D +IYV  +  S +  ++  VA       
Sbjct: 304 QPLIVQKSDGGYIYATTDLAALRYRIEQDQADWIIYVTDAGQSTHFAQVFQVAQRAGWIP 363

Query: 379 AQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
            +I ++      +   DG   K+  R+GD + L+ ++DE                     
Sbjct: 364 NRIRLVHVPFGLVQGEDGK--KLKTRSGDTVRLQDLLDEAIDRARNDLVSRLEAEGRQET 421

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  +V++  L +  +    F + K+    + N   Y+ YAY R + I R
Sbjct: 422 PEFIDHVAQVVGIGAVKYADLSQNRTSNYVFSYDKMLS-LQGNTAPYLIYAYVRVQGISR 480

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           + +        DL      P  S  +  E  L  HL +   V+   T    P +L  YL+
Sbjct: 481 KGQ-------IDLEQLTEQPTLSLQEEEEKLLARHLLQLEDVLAQVTEDLLPNRLCQYLF 533

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+  F+  +       R   +QA    L   RL L    A  +  GL+++G++    M
Sbjct: 534 ELSQKFNQFYD------RCPILQAEE-PLRNSRLGLAQLTARTLKLGLSLLGIQVLERM 585


>gi|160947527|ref|ZP_02094694.1| hypothetical protein PEPMIC_01461 [Parvimonas micra ATCC 33270]
 gi|158446661|gb|EDP23656.1| hypothetical protein PEPMIC_01461 [Parvimonas micra ATCC 33270]
          Length = 578

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 136/567 (23%), Positives = 233/567 (41%), Gaps = 114/567 (20%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG--- 87
           R +IE P +   G  S      LS+ L   P  I+E +V RI ID   DS+F   K    
Sbjct: 25  RELIEIPPNPEMGDFSF-PCFKLSKILRKAPNIISEELVNRINID---DSIFSNVKNVGP 80

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN ++  S + + ++  I     +YG +       + I++ S N   P H+GH R  ++
Sbjct: 81  YINFFVRNSEFSKNVIKEIFDKKEKYGSSQDNLDKTIVIDYSSTNIAKPFHIGHIRSTLI 140

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203
           G+ + ++  F GY      ++ D G Q   +  +        L+ ND ++   P      
Sbjct: 141 GNVIKNIYNFLGYNTVGVNHLGDYGTQFGKIIAAY------KLWGNDEEINADPINQLLK 194

Query: 204 VYL--KHVGK------ELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLK 250
           +Y+   ++ K      E A  Y ++L N  EE      W    KD S+    K+  D LK
Sbjct: 195 LYVDFNNLCKTDEKMLETARDYFNKLENGDEESVRLWNWF---KDISLMEFQKVY-DKLK 250

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                      + D +RG+    +  ID++ ++                    ++ K LL
Sbjct: 251 V----------KFDSYRGEAYHSQ-FIDDVVKE--------------------LEDKNLL 279

Query: 311 FRSTMVG----DDVDRP---LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSG 362
             S        D  D P   +LKS+ S TY   D+A     K +  F   IYV+ +    
Sbjct: 280 VESDGCKIVNLDKYDLPPALILKSNSSSTYITRDIATALTRKKDYNFYKNIYVVATQQKL 339

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---GMPIKMSKRAGDFITLRHVVD---- 415
           + ++L+AV   +  + A+  + +   +   +D   G   K+S R G+ I L  V++    
Sbjct: 340 HFQQLKAVLEEMGYEWAKDCIHVSFGMVSVKDNFLGTSAKLSTREGNVIFLNDVLEKSVE 399

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFY 453
                                EVG  +V F  L+    +   FD+  V   + +  P  Y
Sbjct: 400 KTLEIINERNSSLENKEEIAKEVGIGAVIFQELFNTRIKDYSFDWNNVLNFEGETGP--Y 457

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEF--DTSELQLIVHLAEYPRVIE 510
           VQY+ AR  SI  +        DF L   N+ I + S +  +  EL LI  + ++  ++ 
Sbjct: 458 VQYSAARANSILEKN-------DFYLKLDNIDISKVSNYKMNIDELSLIKSIYKFEDILL 510

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWS 537
           ++    EP  LA Y+ ++A +F+  ++
Sbjct: 511 DSAKKYEPSILARYITEVAKLFNKFYN 537


>gi|253742171|gb|EES99018.1| Arginyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 621

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 138/632 (21%), Positives = 252/632 (39%), Gaps = 120/632 (18%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAM-------------ILSRPLGLDPLTIAELI-----V 69
           +L   +I    +  +GH   N+ M             + S P  L  L   E++      
Sbjct: 36  VLTSPLITPTTNIKYGHYQLNSTMGIAKIIKDLHYTELPSNPAELSGLITQEILRVQDEY 95

Query: 70  ARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNI 125
            ++K  P  +++V IAG  FINL L+P+YL      I ++ + +G   +  +    ++ +
Sbjct: 96  TKVKGCPKPIEAVNIAG-CFINLMLTPTYLLSKCFDIYMA-VPFGSLPKPPVLPKKRIAV 153

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++GD+++ L  + GY+V R  ++ D G Q   L        
Sbjct: 154 DFSSPNVAKSMHVGHLRSTIIGDSISRLYEYVGYDVHRINHVGDWGTQFGMLI------- 206

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVK--------- 234
                              YL  +  E+AD   +   +   P +  +   K         
Sbjct: 207 ------------------TYLTDMHPEIADAAAHCRRVTMLPIDNLVAFYKKAKERFDTD 248

Query: 235 -DYSVQAMMKIIRDDLKALNIQ-----HDIF-ISEDDFHR-GDPSPIRDIIDNLARQGYV 286
            D+  +A   +++  L+ LN++     H I  IS  +F R  D   I+  ID      Y 
Sbjct: 249 ADFQKRAYETVVK--LQHLNLEEFYLWHKICEISRHEFQRIYDRLDIK--IDEFGESYYK 304

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL--KSDGSYTYFAADLA--YF 341
           ++      + K      +   QL  ++T++  + +D PL+  KSDG +TY   D+A  Y 
Sbjct: 305 FKLGTTVARLKR-----LHLTQLSDKATVIPVEGMDYPLIIVKSDGGFTYDTTDMAAIYH 359

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           + +  R  D  +YV+ +  S + + +   A           V +   V L  DG  +K  
Sbjct: 360 RTQVLRA-DKCVYVVDAGQSSHFELVFGAAEKAGWITKGQAVHVPFGVVLGSDGKRLKT- 417

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-------------------LDFDFCKV 442
            RAG+ + L  ++DE  ++S R +    ++ E                     D    ++
Sbjct: 418 -RAGETVKLEDLLDEAVAESTRLLEERNRDQEFSQEEVRQIVEAVGYGAVKYADLSSHRI 476

Query: 443 KEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
           K+           K N   Y+ Y++ R  SI R+A     +L     P+++    S  D 
Sbjct: 477 KDYKYDPKRMLNLKGNTAAYLLYSFTRISSICRKAGINREELYTTSLPKDL----SIGDP 532

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE+ L+V L +    I        P+++  ++Y +AS +   +   R    +   ++ + 
Sbjct: 533 SEINLLVALLKVHDTILFTLDDLCPHRICDWVYSVASAYTDFYEKCRV---IETSESGDT 589

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                RL L       +    +++G+   + M
Sbjct: 590 VCNKSRLALCEMTRQSLRLAFHLLGIREIDRM 621


>gi|171685240|ref|XP_001907561.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942581|emb|CAP68233.1| unnamed protein product [Podospora anserina S mat+]
          Length = 634

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 127/562 (22%), Positives = 223/562 (39%), Gaps = 97/562 (17%)

Query: 80  SVFIAGKGFINLYLSPSYLRK--ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           S F  G   +N  L P+ L+K     +    G++  +       K+ +EF S N   P H
Sbjct: 111 SFFFKGAPLVNSIL-PTILQKGKTFGTNPSLGLKDPKEPSAGRKKIIVEFSSPNIAKPFH 169

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNN--- 192
            GH R  ++G  L +L   +G++VTR  Y+ D G Q   LAL+ F ++  ++AL  +   
Sbjct: 170 AGHLRSTIIGGFLGNLYEGAGWDVTRINYLGDWGKQYGLLALA-FEKFGDEKALEQDPIN 228

Query: 193 ---------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-KDYSVQAMM 242
                    ++++ E        K  G+++ +  ++ L       +  +  +D    AM 
Sbjct: 229 HLFQLYVRINTEMTEEKEQIAKRKEAGEDVTEAEANSLDEQARRYFKKMTDRDEKALAMW 288

Query: 243 KIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           K  RD            LNI  D +  E      D   + DI   L              
Sbjct: 289 KKFRDLSIVRYKQTYARLNIHFDEYSGESQVSEAD---MADIGKQL-------------- 331

Query: 295 KSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-G 348
           + K   K D +  QL+  S +V    G  +++PL+ K DG+  Y   D++    ++ +  
Sbjct: 332 EEKKISKED-NGAQLIDFSELVPGKEGKRLEKPLVRKRDGTALYLTRDISELLARHAKYN 390

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV--------------LLCELV 389
           FD MIYV+ S    ++K+L  +        +++K   IN                L +++
Sbjct: 391 FDKMIYVVASAQDLHLKQLFKIIELLGHKDIADKCQHINFGLVLGMSTRKGTVKFLDDIL 450

Query: 390 RLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-Q 445
           R   D M   M K    +  + +   V D +G  SV    +  K      F+  ++   +
Sbjct: 451 RDVADKMHETMRKNEDKYNQVENPEAVADVLGISSVMVQDMTGKRINNYTFNMDQMTSFE 510

Query: 446 SKENPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               P  Y+QYA+AR  SI R+A    +     DF L            +   + ++  L
Sbjct: 511 GDTGP--YLQYAHARVCSIKRKAGLSDEEIASADFSLLT----------EAHAVNIVRLL 558

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P V  N     EP  +  YL+ +       +   R       +  +   +   R+ L
Sbjct: 559 AQWPDVFSNTLRTLEPTTVLAYLFKMTHALSSSYDVLR-------IMGSEPAVLKARMAL 611

Query: 563 VHAVASIINSGLNIIGVESPNE 584
             A   ++ +G+ ++G+ SP E
Sbjct: 612 YEAAHIVLGNGMRLLGL-SPVE 632


>gi|170052266|ref|XP_001862144.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167873169|gb|EDS36552.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 557

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 202/505 (40%), Gaps = 94/505 (18%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +EF S N   P H GH R  ++G+ LA+L    G++V R  Y+ D G Q   L L V
Sbjct: 106 KTLVEFSSPNIAKPFHAGHLRSTIIGNFLANLYDHLGHDVVRLNYLGDWGTQFGYLKLGV 165

Query: 182 FWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS---SELLN--FPEEKWLPIV 233
             +    +    N    L E Y           EL D+     SEL N  F E       
Sbjct: 166 DLKGLSREDIRRNPIESLYEAYVYAYGKAEDSPELQDRARQIFSELENGTFSELDTWSDF 225

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGIL 291
           + Y+V        D+LK   +   +    D +H      ++DI  + NL R+  V     
Sbjct: 226 RSYTV--------DELK--QVYERLGTRFDQYHWESQYGVKDISHVINLLREQKVL---- 271

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
                  TQ+   D ++++     VG+  + P++KSDG+  Y   D+A    ++ R  FD
Sbjct: 272 ------VTQE---DGRKVV----KVGNR-NVPIVKSDGTTLYLTRDVAALMDRFGRFRFD 317

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           N  YV+ +  S +   L ++A        Q+N+     +   + G  + MS R G  + L
Sbjct: 318 NAFYVVDNSQSDHFSALMSIA-------QQLNLSYAASISHVKFGRVLGMSTRKGTVVFL 370

Query: 411 RHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           + ++DE                            +G+ +V    L ++ +   DF + + 
Sbjct: 371 KDILDEAEAQMKQKQLNTKTTKSNALNNPKVATILGTTAVVVNDLKQRRTRDYDFSWDRA 430

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF--DLFPRNVIPQESEFDTSELQLIV 500
             QS  +    +QY + R  S+ + A +  P ++   +L P          +   L L+ 
Sbjct: 431 L-QSDGDTGIKLQYTHCRLSSLEKNAAEQ-PAIECKPELLP----------EPEALALVC 478

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L ++  V+  A   +E   L  YL+ L +      +  R    L  +   +++  + RL
Sbjct: 479 ELVKFEDVLAEAAERREACILVNYLFGLCN------ATSRALQTLHVMNEPSQERRLQRL 532

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A    +  G+ I+G+E   EM
Sbjct: 533 LLFGATRKTLRRGMEILGLEPLEEM 557


>gi|261379756|ref|ZP_05984329.1| arginine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797434|gb|EFC52781.1| arginine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 637

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEVLADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + +  ++   +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            ++ F G  V R+ ++ D G Q   L
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGML 169



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 18/132 (13%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R +S+FR+A       ++D     V+ +       E QL   L ++  V
Sbjct: 519 NTAPYLQYAYTRVQSVFRKAG------EWDATAPTVLTE-----PLEKQLAAELLKFEDV 567

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++      P+ LA YLY +A++F   +      P L+   A        RLQL      
Sbjct: 568 LQSVADTAYPHYLAAYLYQIATLFSRFYEAC---PILKSEGATRNS----RLQLAKLTGD 620

Query: 569 IINSGLNIIGVE 580
            +  GL ++G++
Sbjct: 621 TLKQGLELLGID 632


>gi|159900646|ref|YP_001546893.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893685|gb|ABX06765.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 576

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 121/578 (20%), Positives = 224/578 (38%), Gaps = 103/578 (17%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSP-SYLRKILSSIVVSGIEYGRN 115
           G++P   A+ +   +K  P+   +  +  G ++N  L+P ++ + +L  I     EYGR+
Sbjct: 52  GINPAQFAQTLANALKFTPESLVLKASALGAYVNFSLNPVTFAQSVLHDISQRKAEYGRS 111

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
             G+   V +++ S N    M V H R  ++G  + ++    GY V R  +  D   Q+ 
Sbjct: 112 TKGQNQAVVVDYSSPNIAKRMRVDHIRSTMIGQAIVNIYRALGYHVIRMNHWGDYDPQLG 171

Query: 176 TLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLP 231
            ++L+    +Q    N +S L   E      +      +LA  ++S+L     +  K L 
Sbjct: 172 -ISLAAMQHFQHRNGNGESMLASLEQQTQQYHADDQVHDLAQAWASKLTKGEPQAIKLLQ 230

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQH---------DIFISEDDFHR-----GDPSPIRDII 277
            + D S+ A     R    A ++QH          + I E   ++     G  + ++D++
Sbjct: 231 QLVDLSLTANQANYRRLGVAFDVQHCESFYAREAQVVIKEALHYQIAQLDGHVAVVKDLL 290

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           D    QG     +L                                L +SDGS  Y   D
Sbjct: 291 DE---QGKALPTLL--------------------------------LNRSDGSSLYITRD 315

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV------- 389
           +A  K + E      +IYV+      + ++   ++  +   KA ++ + C ++       
Sbjct: 316 IAAIKYREELYQPTKIIYVVKQAQELHFRQAFTISKTLGYTKADLSHVACGMILGPERRS 375

Query: 390 --------RLYRDGMPIKMSKRAGDFIT--------------LRHVVDEVGSDSVRFMML 427
                    +Y + +  +   RA   I               +  + ++VG  +V +  L
Sbjct: 376 PSGARFSTMIYLEPLLDEACTRAKALIKQKALESKIPFSSTEINEIAEQVGVGAVIYHNL 435

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
               +  +  D+ ++      N   Y+QY +ARC SI R         DF   P+N    
Sbjct: 436 QHDPAHDVVVDWERMLA-FDGNSSTYLQYMHARCCSILR---------DFGRIPQNY-DG 484

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                ++E  L+  LA  P+VI +A     P+ ++ +LY  A  F   +           
Sbjct: 485 RVLTHSAEQALLKELARLPQVIVDAAERYAPFVVSDWLYATAKAFAVFYD------SCSV 538

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++A    L   R QLV A A  + +GL ++ + +P  M
Sbjct: 539 LKAETLALRAARGQLVAATAQALRNGLGLLSIAAPERM 576


>gi|187453153|emb|CAQ34913.1| arginyl-tRNA synthetase [Canavalia ensiformis]
          Length = 595

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 128/562 (22%), Positives = 228/562 (40%), Gaps = 86/562 (15%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119
           P  + + IVA +     ++S  IAG GF+N+ LS  ++ + L  +++ GI+ +   L  K
Sbjct: 73  PPALGQAIVANLPQSEMIESCSIAGPGFVNIVLSKKWIAQRLEMMLIDGIDTWAPRLPVK 132

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE-VTREYYINDAGAQINTLA 178
              V ++F S N    MHVGH R  ++GDTLA ++ F+  E + R  ++ D G Q   L 
Sbjct: 133 --VVMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFACVETLIRRNHLGDWGTQFGMLI 190

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
             +F      +Y N  D+ E          +G +L   Y +  + F  +   P  K  + 
Sbjct: 191 AHLF-----DMYPNPEDVNE--------TAIG-DLQAFYKASKVRFDND---PEFKLRAQ 233

Query: 239 QAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           Q+++ +   D K       I  +S+ +F +      + +   +   G  +   L PP  +
Sbjct: 234 QSVVLLQSGDKKYRKAWERICDVSKAEFEK----VYKRLGVRVEAMGESFFNDLIPPTLE 289

Query: 298 TTQKC----DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDN 351
              K     D D  +++F   + G ++    +K DG Y YF++DLA  +++   E+  + 
Sbjct: 290 KLDKLGLIEDSDGARVIF---VEGVNIPIIAVKRDGGYNYFSSDLASLWYRLNVEK-LEW 345

Query: 352 MIYVMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLCELVR----LYRDGMPIKMSKRAGD 406
            IYV       +   L +A   A    K + +   C  +     L  DG   +   R+ +
Sbjct: 346 NIYVTDVGQWQHFDMLFKAFRRAGWLPKDENDFPKCTHIGFGLVLGEDGK--RFRSRSSE 403

Query: 407 FITLRHVVDEVGSDSVRFMML------W-----RKNSELLDFDFCKVKE----------- 444
            + L  ++DE        ++       W      K SE + +   K  +           
Sbjct: 404 TVRLVDLLDEAKRRCKSALLERDAAKDWSEEEIEKTSEAIGYGAVKYADLKINRLTNYTF 463

Query: 445 ------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                   K N   Y+ YA+AR  SI R++     +L  +    N++    +    E  L
Sbjct: 464 NFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKN---GNIVLNHED----ERAL 516

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +HL ++P V   +     P  L  YLY+L  +F   +            Q         
Sbjct: 517 GLHLIQFPEVFVESLANLLPNVLCEYLYNLTEIFTKKFYTN--------CQVIGSPEQTS 568

Query: 559 RLQLVHAVASIINSGLNIIGVE 580
           RL L  A A+++     ++G++
Sbjct: 569 RLLLCEATATVMRKCFYLLGID 590


>gi|171473734|gb|ACB47040.1| putative class Ic arginyl-tRNA synthetase [Micromonospora chersina]
          Length = 572

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 233/599 (38%), Gaps = 123/599 (20%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           ++AA+ L+R LG  P  IA  ++ R ++     +  ++G GF+NL ++   L  ++S++ 
Sbjct: 37  SDAALALARRLGRPPRAIATEVLERAELADLCSATEVSGPGFLNLTVADDALAGLVSALA 96

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G         V +++ + N    MHVGH R  V+GD  A L+ + G+ V R  +
Sbjct: 97  AD-PRLGVPEAAAPETVVVDYSAPNVAKEMHVGHLRSTVIGDAAARLLEWLGHRVLRANH 155

Query: 167 INDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           + D G     L                    L  F++  +A ++ D    E +      +
Sbjct: 156 LGDWGTPFGMLIEHLVDLGEAEAAQELSMGDLDSFYKAARAKFDAD----EAFRERARQR 211

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V  +  D  +  L       W  +V+    +     + D L       D+ ++E DFH 
Sbjct: 212 VVALQGGDATTLRL-------WRLLVEQS--ERYFLTVYDLL-------DVTLTERDFH- 254

Query: 268 GDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-P 323
           G+ S    +  ++++L R G +        +S     C       +F    VG D +  P
Sbjct: 255 GESSYNDLLGPVVEDLDRLGLL--------RSSDGAAC-------VFPPGSVGRDGEPLP 299

Query: 324 LL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG----------------------- 357
           L+  KSDG Y Y A DLA  + +    G   ++YV+G                       
Sbjct: 300 LIVRKSDGGYGYPATDLAAIRHRTGTLGATRLLYVVGLPQRRHFEMVYAAAAQAGWLAPP 359

Query: 358 --SDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++H G+        + L + A+   +    +   +     L R+  P      A +  
Sbjct: 360 ARAEHVGFGSILGPDGRMLRSRASGSVKLVGLLEEAVARATALARERNPELGEAEAAE-- 417

Query: 409 TLRHVVDEVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
               V   VG  +V++  L   R    +LD++     +    N   Y+QYA++R RSIFR
Sbjct: 418 ----VGRAVGIGAVKYADLSSDRHKDYVLDWERMLSLDG---NSAPYLQYAHSRIRSIFR 470

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A          +  R   P  S  D +E  L   L  +  V+       E + L   L 
Sbjct: 471 RAG---------VAARPEAPV-SLVDPAERALAFELVGFGAVVGAVAENLEFHHLTACLS 520

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA+ F   +      P LR     +  +   RL L    A ++  GL+++G+ +P  +
Sbjct: 521 RLAAAFSAFYER---CPVLR----ADEPVRESRLVLCDLTARVLRQGLHLLGIRTPERL 572


>gi|194899366|ref|XP_001979231.1| GG14252 [Drosophila erecta]
 gi|190650934|gb|EDV48189.1| GG14252 [Drosophila erecta]
          Length = 572

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 199/507 (39%), Gaps = 97/507 (19%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V   
Sbjct: 117 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-------LLNFPEE-------KWL 230
             Q L  +D ++       +Y  +V    A +   E       L    EE       K  
Sbjct: 174 --QLLNVSDKEMQLSPIETLYKCYVAANKAAEQRPEIAQQARHLFAALEEGTDTTMTKQW 231

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
              + Y+++ + K+       L +  D +  E  + +     I+ ++D L        G+
Sbjct: 232 QQYRKYTIEDLSKVY----NRLGVHFDSYEWESQYSQ---QHIQGVLDKLRS-----AGL 279

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
           L P                  R  +V D    P++KSDGS  Y A D+A    +  R  F
Sbjct: 280 LQPEHDG--------------REVVVVDGRRIPVIKSDGSTLYLARDIAALLERLSRFQF 325

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             ++YV+ +  + +   L   +AA++++      L  E ++  + G    MS R G  + 
Sbjct: 326 SRLLYVVDNGQADHFNALFKTSAALNDR------LSLEQLQHVKFGRIHGMSTRQGKAVF 379

Query: 410 LRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFY-- 453
           L+ V+DE   +  +        R+N  L D   C +           K++ + +  F   
Sbjct: 380 LKDVLDEARDIMREKRSCSPTTRQNYNLDDEHVCDILGVSAVLVNVLKQRRQRDHEFSWQ 439

Query: 454 ------------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQL 498
                       +QY + R  S+ +     F ++D D    ++ P    F T     L L
Sbjct: 440 QALQVNGDTGIKLQYTHCRLHSLLQN----FSEVDLD----DIKPDWKHFATEPADALDL 491

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  LA + + I  +    E   L  YL+ L +      +  R   RL   Q +  +  + 
Sbjct: 492 LYALARFDQSIWQSKEQLEACVLVNYLFGLCN------AASRALKRLPVKQESCLQKQLQ 545

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L HA    +  G+ ++G+   ++M
Sbjct: 546 RLLLFHAAKRTLRQGMQLLGLRPLDQM 572


>gi|262196660|ref|YP_003267869.1| arginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080007|gb|ACY15976.1| arginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 580

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 130/574 (22%), Positives = 231/574 (40%), Gaps = 87/574 (15%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL--SSIVVSGIE 111
           ++ LG  P  +A  +  R      +  V   G  F+N   + +     L  +++   G  
Sbjct: 52  AKALGQPPPKLAAQVAERFAPGEYLSEVKATGP-FVNFRANRASALHFLRDATLAADGPA 110

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
              +  G G  V I++ S N +  +   H R  V+G  L +L   +GY V    ++ D G
Sbjct: 111 LIPSSPGAGKTVCIDYSSPNISKHLAYHHIRSTVIGHALVNLHRAAGYRVVGINHLGDWG 170

Query: 172 AQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                L A    W   + L  +  +        +Y++   KE+AD  +   L     +W 
Sbjct: 171 TTHGMLLAAHARWGAPEPLTVDGLN-------ALYVR-FRKEMADDPT---LEEEGRRWF 219

Query: 231 PIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFH--RGDPS---PIRDIIDNLARQG 284
             ++D   +A     R  ++     +H   I   +F   RG+ +    I  ++  L  +G
Sbjct: 220 KKLEDGDAEARALWQRFREVSWAEFEHVYRILGIEFEDVRGESAYEDAIAGVLAMLEERG 279

Query: 285 Y--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
              V EG L  P        D     LL R             K DG+  Y   DLA   
Sbjct: 280 LPTVSEGALVVPLE------DAGMPPLLLR-------------KQDGATLYGTRDLAAAI 320

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
            +++   F   +YV+    S + ++L E +  A  +   +   +   +VR+       K 
Sbjct: 321 YRHDTYDFARSLYVVDRGQSLHFRQLFEVLRRAGCDWAERCEHVPFGVVRVGGK----KT 376

Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433
             R G+ + L+ V+ E                           VG  +V F  L  +  +
Sbjct: 377 GTRTGNVVLLKEVLAEAEQRAADVVRENNPEMTGEAAAETARMVGVGAVVFANLASQREK 436

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEF 491
            +DF + +V   S ++   YVQYA+ARC SI R+A++  + P  + DL   + +  E+E+
Sbjct: 437 DVDFAWEQVLSVSGDSGP-YVQYAHARCASILRKAEERGLTPGAEVDL---SALSHETEW 492

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
                 L   L +    +  A    EP+ L+ YL DL + F   ++ G ++  LR +  +
Sbjct: 493 -----ALARKLLDLGETVHRAAENNEPHLLSRYLLDLCAAFSRWYTAGNQDKSLRAL-VD 546

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +   R+ LV     ++  GL ++G+E+P++M
Sbjct: 547 DDAVARARITLVAIAGRVLARGLGLLGIEAPSDM 580


>gi|242009305|ref|XP_002425430.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212509247|gb|EEB12692.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 575

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 186/450 (41%), Gaps = 58/450 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAM-----ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           +VI    +   G    N+AM     + S     +P  +AE I + +     ++ + +AG 
Sbjct: 84  VVIAASNNSKFGDYQCNSAMPIVQLLKSEGKKSNPREVAEKIKSCVSPHNLIEKLEVAGA 143

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ LS +  +  L  I+ +G+   +  +    +V ++F S N    MHVGH R  ++
Sbjct: 144 GFINVTLSRTEGQNCLQFILKNGVLPPK--VNAKCRVIVDFSSPNIAKEMHVGHLRSTII 201

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD++++L+ F G++V R  ++ D G Q   L   +                E  +P    
Sbjct: 202 GDSISNLLEFLGHDVVRVNHVGDWGTQFGMLIAHL----------------EDKFPDYLT 245

Query: 207 KHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           K    ++L   Y      F E++         V  +     D LKA N+  D  +S  +F
Sbjct: 246 KSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQSHHPDYLKAWNLICD--VSRKEF 303

Query: 266 HRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF----RSTMVGDDV 320
            +     I   +D  +  +G   E        K  +  +++ K  L     R  M GD  
Sbjct: 304 QK-----IYQRLDIRITEKG---ESFYQTRMEKLVK--ELEAKNFLVEDEGRKIMWGDSS 353

Query: 321 DRP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
             P  ++KSDG +TY  +DLA  K +  E   D +IYV  S  S +   L+  A      
Sbjct: 354 SIPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIYVTDSGQSTHFDVLQKCA------ 407

Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             +  +L  E VR+   G  +       K   R+G+ + L  ++DE    S+  +   ++
Sbjct: 408 -IKCGILNPEKVRIDFVGFGVVLGEDKKKFKTRSGETVRLVDLMDEGLKRSLEKLKEKKR 466

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           +  L   +  K +E      + Y   ++ R
Sbjct: 467 DEVLTPEELKKAQESVAYGCIKYADLSHNR 496


>gi|321261407|ref|XP_003195423.1| arginine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317461896|gb|ADV23636.1| Arginine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 622

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 195/487 (40%), Gaps = 108/487 (22%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           + YG    G G +V ++F S N   P H GH R  ++G  + +L   +G+ VTR  Y+ D
Sbjct: 142 LAYGTTTEGAGKRVVVDFSSPNIAKPFHAGHLRSTIIGAVICNLHEANGWNVTRLNYLGD 201

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK--HVGKELADKYSS----- 219
            G Q   L++  F R     Y N+ +L   P  +   VY+K   V  E   K+ +     
Sbjct: 202 WGTQYGLLSVG-FDR-----YGNEEELVKDPIHHLFQVYVKINSVRDEQKKKFEAGEIIP 255

Query: 220 --ELLNFPEEKWLPIVKDYSVQAMMKIIR-DDL---------KALNIQHDIFISEDDFHR 267
             E ++   +K    ++D   +A+ +  R  DL         K LN+  D++        
Sbjct: 256 DEENIHLLAKKVFKDMEDGEPKAIAQWARFRDLSIEKLKGTYKKLNVHFDVYW------- 308

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-K 326
           G+     + I+   R   V E  L          C+ DR  LL   T     +D+ ++ K
Sbjct: 309 GESQVSEESIERAVR--IVQEKNLT---------CE-DRGALLVDLTKF--KMDKAIVRK 354

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
            DG+  Y   DL     KY++  FD  IYV+ +  + +  +L      + E  A      
Sbjct: 355 GDGTSIYLTRDLGGAYDKYQKYKFDKHIYVVQAAQTLHFNQLFKTLELMGEPYAD----K 410

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------V 417
            ELV     G+   MS R G+ + L  ++ E                            +
Sbjct: 411 LELVTF---GLVKGMSTRKGNVVFLEDIIAEATDVMHEQMKSNEIKYAQVEDPEGTSAII 467

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           G+ +V+   +  +     DFD  +    +    P  ++QY++ R  S+ R+         
Sbjct: 468 GTTAVKIQDMAGRRINDYDFDIKRCTSFEGDFGP--FIQYSHVRLCSVQRKN-------- 517

Query: 477 FDLFPRNVIPQE-SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               P  ++PQ  +E D S L      ++I+HLA YP  + NA +  EP +L  + + L 
Sbjct: 518 ----PNVLVPQSINEIDLSILDEPKVNEIIMHLALYPTHVRNAFLQSEPSQLVTWCFKLG 573

Query: 530 SVFHGHW 536
            +    W
Sbjct: 574 HLVGAAW 580


>gi|327312637|ref|YP_004328074.1| arginine--tRNA ligase [Prevotella denticola F0289]
 gi|326946176|gb|AEA22061.1| arginine--tRNA ligase [Prevotella denticola F0289]
          Length = 606

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 128/582 (21%), Positives = 230/582 (39%), Gaps = 138/582 (23%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ +    +L+ I        + +      V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY----QQALYNNDSDLPEGY 200
           +G +LA +M  +G +V +   +ND G  I    L+   W      ++A    D  + + Y
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLAWLKWGNGITPEKAGKKGDHLIGDFY 200

Query: 201 YPGVYLKHVGKE---LADKYSSELL-----NFPEEKWLPIVK------------DYSVQA 240
              ++ KH  +E   L ++Y  E +         E+  P++K            D  V A
Sbjct: 201 V--LFDKHFKEECRQLQEQYEKEGMAPDAAKEKAEQEAPLIKEAHEMLVKWEQGDSEVHA 258

Query: 241 MMKIIR--------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + + +         +  KAL +  D    E + +             L  +  V EG+  
Sbjct: 259 LWEKMNSWVYAGFDETYKALGVSFDKIYYESNTY-------------LVGKKKVEEGL-- 303

Query: 293 PPKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCK 344
                         K L FR       + +  + +D+ LL + DG+  Y   D+   + +
Sbjct: 304 -------------EKGLFFRKDDNSVWADLTKEGLDQKLLLRKDGTSVYMTQDIGTAEMR 350

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           + +   D MIYV+G++ + + + L  +   +  K  +  V     +    +G   KM  R
Sbjct: 351 FNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSR 407

Query: 404 AGDFI----------------------TLRHVVDE--------VGSDSVRFMML---WRK 430
            G  +                       L  + +E        VG  ++++ +L    RK
Sbjct: 408 EGTVVDADDLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARK 467

Query: 431 N-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRN 483
           N      E +DF+          N   ++QY YAR RSI R+  A+DI       L P +
Sbjct: 468 NMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKAAAQDI-------LLPAS 511

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  ++  +  E++LI  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 512 -LADDAPLNEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILSADTEAKKITRLVLARNVAKVIRNGMALLGIEVPERM 606


>gi|90075828|dbj|BAE87594.1| unnamed protein product [Macaca fascicularis]
          Length = 631

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 132/591 (22%), Positives = 240/591 (40%), Gaps = 118/591 (19%)

Query: 43  GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM +S+ L      ++P  IAE I   +  +  ++ V IAG GFIN++L   +
Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA-- 155
           + + L+S++V+G++     +G+  KV ++F S N    MHVG       G     L+A  
Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGDW-----GTQFGMLIAHL 223

Query: 156 ---FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
              F  Y +T    I D         L  F++  +  ++ + +  +  Y  V L   GK 
Sbjct: 224 QDKFPDY-LTVSPPIGD---------LQAFYKESKKRFDTEEEFKKRAYQCVVLLQ-GK- 271

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                     N    K   ++ D S Q   KI      AL++   +    + F++     
Sbjct: 272 ----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--LIERGESFYQ---DR 312

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + DI+     +G+V              + D D ++++F   + G  +   ++KSDG YT
Sbjct: 313 MNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 354

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y  +DLA  K +  E   D +IYV+ S  S + + + A A  +     ++        R+
Sbjct: 355 YDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKV-------TRV 407

Query: 392 YRDGMPI-------KMSKRAGDFITLRHVVDE---------------------------- 416
           +  G  +       K   RAG+ + L  ++ E                            
Sbjct: 408 FHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKERDKVLTAEELNAAQT 467

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A     ++
Sbjct: 468 SIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NI 521

Query: 476 DFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+LA+ F  
Sbjct: 522 DEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTE 581

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 582 FYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 631


>gi|255994895|ref|ZP_05428030.1| arginine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993608|gb|EEU03697.1| arginine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 576

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 135/606 (22%), Positives = 240/606 (39%), Gaps = 115/606 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-------KIDPDVDSVFIAG 85
           +IE P D A+G  +      L++     P  IAE +  ++       KI+P         
Sbjct: 33  IIETPNDDANGDYAL-PCFTLAKKFRKSPNLIAEDLAEKLFKADFIEKIEP--------V 83

Query: 86  KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
            G++N YL   S+++  L  ++     YG +L      V +EF S N   P H+GH R  
Sbjct: 84  SGYLNFYLKKESFIKDTLDEVISKLSAYG-HLSSNDKTVVVEFSSPNIAKPFHIGHIRST 142

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------ 198
           ++G+ LA++    GY   R  +I D G Q   + +S + R     + N+ D+        
Sbjct: 143 LIGNALANISKALGYNTVRVNHIGDYGTQFGKI-ISAYKR-----WGNEEDVDREPVKTL 196

Query: 199 -GYYPGVYLKHVGKELADKYSSELLNFPEE---------KWLPIVKDYSVQAMMKIIRDD 248
             YY   + +    E  ++ +       EE         KW    +D S++   K+   D
Sbjct: 197 LSYYTRFHAEAETDETLEEEARMHFKNLEEGREEETKLWKWF---RDVSLKEFGKVY--D 251

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  L I+ D F  E  +    P+    +ID +       E +    KS+     ++ +  
Sbjct: 252 L--LGIKFDSFDGESFYTDKMPA----VIDEM-------ESMNLLEKSRGATIVNLQKYN 298

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367
           +           D  + KSDGS  Y   D+A    ++E+  F   IYV+G+    + K+L
Sbjct: 299 M----------TDVLVKKSDGSSLYITRDIAAAIYRHEKYNFYKNIYVVGAQQDLHFKQL 348

Query: 368 EAV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +                          +S +   + V L +++    +   + +  R 
Sbjct: 349 VKILELMNKPFAKDCVHVPFGMVSIEGGTLSTRNGTV-VFLEDVLSKAIEKTLVTLEDRN 407

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRS 463
                 + V  +VG  +V F  L+  N+ + D+ F   +  S +     YVQY  AR  S
Sbjct: 408 FSSDKRQEVARQVGVGAVVFQELY--NTRIKDYQFSWDRALSFDGETGPYVQYTCARANS 465

Query: 464 IFRQAKD---IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           +  +A D      D+ D D+   + I  +S +      L+  +  +   +  A    EP 
Sbjct: 466 VLSKASDEGIAIKDIEDVDI---SYITNKSAY-----ALVRLIFNFSDKLTEAFERYEPS 517

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y  D+   F+  +           +  +N +    +L LV A   ++ + L I+G+
Sbjct: 518 IVARYAMDVCKAFNRFYHD-------EHILTDNEEERDAKLLLVKASVILLKNVLKILGM 570

Query: 580 ESPNEM 585
           ESP++M
Sbjct: 571 ESPDKM 576


>gi|66823143|ref|XP_644926.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74857747|sp|Q558Z0|SYRC_DICDI RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|60473123|gb|EAL71071.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 589

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 122/528 (23%), Positives = 213/528 (40%), Gaps = 80/528 (15%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +++IL  ++    +YG    GKG KV +EF S N   P H GH R  ++G+ + +L    
Sbjct: 90  VQEILKEVINQKEKYGMTEQGKGKKVIVEFSSPNIAKPFHAGHLRSTIIGNFMVNLFNEL 149

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELA 214
            YE     Y+ D G Q   LA+          Y ++ +L   P  +   VY++  G+   
Sbjct: 150 AYETVSMNYLGDWGKQYGLLAVGF------EKYGSEEELLADPIKHLYNVYVQINGEAEK 203

Query: 215 DKY---------SSELLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDD 264
           ++          ++ +      +  P + D + +A  K + D D +AL I          
Sbjct: 204 EEEAKKKYAEEIAAGVEPTAPLQTTPTIHD-TARAYFKRMEDGDAEALAIWK-------R 255

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-DVDRP 323
           F        +DI + L  +  +Y G     +  T +   +  K LL  S      D+ +P
Sbjct: 256 FRDLSIVKYKDIYNRLNVKFDIYAGESLVTEGMTIEFKKLQDKNLLEDSQGAKVIDLSKP 315

Query: 324 -------LLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRL-------- 367
                  + K+DG+  Y   D+ A    K   GFD M YV+ S    + ++L        
Sbjct: 316 NKLGKVLVQKTDGTTLYITRDIAAAVDRKNNIGFDKMYYVVASQQDFHFRQLFDILGKMD 375

Query: 368 -----------EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHV 413
                        +   +S +K  + V L +++   +  M   M +    F  +     V
Sbjct: 376 YQWQKDLTHINYGMVKGMSTRKGTV-VFLEDILNKTQKKMLKIMKQNEQKFAEIEDPEKV 434

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
            D VG  +V       K ++  DF++ + +K      P  Y+QYA+AR  S+ R++    
Sbjct: 435 ADIVGLSAVVIQDFNAKRNKDYDFNWDRMLKSDGDTGP--YLQYAHARLCSLERKS---- 488

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SV 531
               F+  P   +   SE +     L + +  YP +I+      EP  L  YL++LA +V
Sbjct: 489 ---GFEFNPNANLSLLSEPEA--FNLAITIGRYPEIIQLTHNQLEPSTLVGYLFELAHAV 543

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              H        ++ +++   + +   R  L  A   I+ SGL I+G+
Sbjct: 544 SSAH--------QVLWIKDREKDVAEARFVLYWAAKVILGSGLRILGL 583


>gi|281203852|gb|EFA78048.1| arginyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 567

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 210/508 (41%), Gaps = 82/508 (16%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118
           +P  +A    A+  ++  +  V +AG  +IN  ++ + L + IL  ++ +G +YG    G
Sbjct: 53  NPAQLATEYAAKFVLNDLIKEVTVAGT-YINFKINRTILTESILKEVLAAGDKYGCTKQG 111

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G  + IEF S N   P H GH R  ++G+ L ++    GY V    Y+ D G Q   LA
Sbjct: 112 EGKTIVIEFSSPNIAKPFHAGHLRSTIIGNFLVNVYRSLGYTVQSINYLGDWGKQYGLLA 171

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLK-----HVGKELADK---YSSELLNFPEE- 227
           +  + R+  +QAL  +    P  +   VY+K         E+ D+   Y  ++ +  E  
Sbjct: 172 IG-YDRFGSEQALLED----PIKHLFDVYVKINNTAETEPEIHDQARAYFKDMEDGNENA 226

Query: 228 -KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            K     +D S++   +I       LN+Q D +  E     G  S      + L + G V
Sbjct: 227 LKLWSKFRDLSIEKYKEI----YGRLNVQFDEYSGESKMCDGMVSA----YEKLDKLGLV 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY 345
            +       SK  +  D+         +    D+ + L+ K+DGS  Y   D+A    + 
Sbjct: 279 ED-------SKGAKIIDL---------STAKPDLGKVLVKKTDGSSLYITRDIAAASIRK 322

Query: 346 ER-GFDNMIYVMGSDHSGYVKRL-------------------EAVAAAVSEKKAQINVLL 385
           E+  F+ MIYV+ S    + ++L                     +   +S +K  + V L
Sbjct: 323 EQYNFEKMIYVVASQQELHFRQLFKILERMQYPWSKELTHIGYGLVKGMSTRKGTV-VFL 381

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            E++   +  M   M K    F  + +   V D V   +V       K ++  DF++ ++
Sbjct: 382 EEILNESKSIMLETMKKNEQKFAEIENPDEVADIVAVSAVIIQDFSAKRNKDYDFNWERM 441

Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
              +    P  Y+QYA+AR  SI R+    + P  +  L    +             L  
Sbjct: 442 LSFEGDTGP--YLQYAHARLCSIERKTGVSLNPSANLSLLVEPIA----------YNLAT 489

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDL 528
            +  YP +++ A    EP  +  YL++L
Sbjct: 490 IIQRYPEIVQIAFNNNEPNTIVTYLFEL 517


>gi|195457058|ref|XP_002075407.1| GK15297 [Drosophila willistoni]
 gi|194171492|gb|EDW86393.1| GK15297 [Drosophila willistoni]
          Length = 649

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 207/491 (42%), Gaps = 103/491 (20%)

Query: 43  GHLSTNAAMILSRPL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM L++ L     G  P  +A  ++    + P +  + +AG GFIN++L+  Y
Sbjct: 123 GDYQCNNAMALAKKLKDIGIGKSPRDVATELINSCPVSPRIGKLEVAGPGFINIFLNKDY 182

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             + ++ ++ +G++  +  + K  +V ++F S N    MHVGH R  ++G+++  L+ F 
Sbjct: 183 GVRAITDLLRNGVKPPK--VPK-KRVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFL 239

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
            ++V R  ++ D G Q   L   +  R+   L  N+S  P G     Y     KE   ++
Sbjct: 240 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNFL--NESP-PIGDLQAFY-----KESKKRF 291

Query: 218 SSELLNFPEEKWLPIV--------KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             + + F +  +  +V           + Q +  + R + K +  + +I + E    RG+
Sbjct: 292 DEDEV-FKKRAYNAVVALQGGDPNSIKAWQLICDVSRKEFKTIYDRLEINVKE----RGE 346

Query: 270 P---SPIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
               S +  ++D L +Q    V +G  I+ P +SKT                     +  
Sbjct: 347 SFYQSRMLTVVDFLRKQNMLEVDDGREIMWPDESKT--------------------GIPL 386

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVA--AAVSEKK- 378
            ++KSDG +TY  +D+A  + + E    D ++YV+ S  S +   +   A    + + K 
Sbjct: 387 TIVKSDGGFTYDTSDMAAIRHRIEEELCDWLVYVVDSGQSTHFATIFKAAKRCGIFQPKV 446

Query: 379 -----AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-- 431
                 Q  V+L E      DG   K   R+GD + L  ++DE    S+  +    ++  
Sbjct: 447 HRADHVQFGVVLGE------DGK--KFKTRSGDTVKLADLLDEGMKRSLEQLRSRGRDQV 498

Query: 432 ---SELLD------------------------FDFCKVKEQSKENPVFYVQYAYARCRSI 464
               ELLD                        F F K+ +  + N   Y+ Y Y R  SI
Sbjct: 499 LTPQELLDAQEAVAYGCIKYTDLCHNRISDYVFSFDKMLD-DRGNTAVYLLYTYTRICSI 557

Query: 465 FRQAKDIFPDL 475
            R + + F +L
Sbjct: 558 ARNSGEDFSNL 568


>gi|253578270|ref|ZP_04855542.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850588|gb|EES78546.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 588

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 120/612 (19%), Positives = 240/612 (39%), Gaps = 112/612 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V  RP  C       N AM  ++     P  IA+ +VA +K         +   GFINL 
Sbjct: 30  VSNRPDLC---EFQCNGAMAGAKAYKKAPFMIADDVVAYLKDSQVFSMAEVVKPGFINLK 86

Query: 93  LSPSYLRKILSSIV------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +   +L   L  +       VS  +  + +I       I++   N   P+HVGH R A++
Sbjct: 87  VKGEFLADYLKEMAADEKLSVSAAKEPKTII-------IDYGGPNVAKPLHVGHLRSAII 139

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP---- 202
           G+++  +  F G++V  + ++ D G Q+  +   +  R  + +Y +DS    G YP    
Sbjct: 140 GESIKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDS--YTGEYPEEAP 197

Query: 203 -------GVYLKHVGKELADKY-------SSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                   +Y    GK   D+        ++ LL   +  ++ +        +M +   D
Sbjct: 198 FTISELEEIYPCASGKSKEDEAYRNEALEATHLLQQGKPGYMAL-----WNHIMNVSVTD 252

Query: 249 LK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           LK     LN+  D++  E D     P     +++ +  +G+ Y                +
Sbjct: 253 LKRNYDKLNVSFDLWKKESDAQPYIPG----MVEEMKEKGFAY----------------V 292

Query: 305 DRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD 359
           D+  L+       D  + P   LLKSDG+  Y   DLA    +  + F  D ++YV+   
Sbjct: 293 DQGALVVDVKEENDTKEIPPCMLLKSDGASLYTTTDLATI-VERMKLFDPDEILYVVDKR 351

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVG 418
              +  ++   A      K    +       +  +DG P K   R G  + L  ++ ++ 
Sbjct: 352 QELHFIQVFRCARKTGLVKDDTKLSFLGFGTMNGKDGKPFKT--REGGVMRLETLIKDIN 409

Query: 419 SDSVRFMMLWR--------KNSELLDFDFCK---VKEQSKENPVF--------------Y 453
            +    ++  R        + +E++     K   +  Q+ ++ +F              Y
Sbjct: 410 EEMFTKIVENRSVKDKDAKETAEIVGLSAIKYGDLSNQATKDYIFDIDRFTSFEGNTGPY 469

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + Y   R +SI  +    F +   +L    ++      + S+  L++ L  +   +ENA 
Sbjct: 470 ILYTIVRIKSILNR----FAEEGGNLEAGTIL---DPVNDSQKNLMLQLTGFGATVENAF 522

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             + P+K+  Y+Y++++ F+  +         + +   N       +QL+     ++ + 
Sbjct: 523 EEKAPHKICAYIYEVSNAFNSFYHE------TKILSEENEAQKASFIQLLKLTKKVLETC 576

Query: 574 LNIIGVESPNEM 585
           ++++G  +P+ M
Sbjct: 577 IDLLGFSAPDRM 588


>gi|313149279|ref|ZP_07811472.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313138046|gb|EFR55406.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 599

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 132/605 (21%), Positives = 253/605 (41%), Gaps = 84/605 (13%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   +K +    + F   KGF+N
Sbjct: 29  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPAVAAFNVIKGFLN 87

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ +   ++L+ I     +YG     +    V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 88  LTIASAAWIELLNEIHADA-QYGIVSADENAPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 146

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++  +G +V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 147 LANIVMANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLVG 199

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKALNIQHD 257
            Y   + KH   E+A+     +     E   P++ + + + ++K    D  ++AL    +
Sbjct: 200 DYYVAFDKHYKAEVAELMEKGMTKEEAEAASPLMNE-AREMLVKWEAGDPEVRALWQMMN 258

Query: 258 IFISE--DDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-- 312
            ++ E  D+ +R     +    D +  +   Y EG     K K  +  +   K   F+  
Sbjct: 259 NWVYEGFDETYR----KMGVGFDKIYYESNTYLEG-----KEKVMEGLE---KGFFFKKE 306

Query: 313 -----STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
                + +  + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + +
Sbjct: 307 DGSVWADLTAEGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQ 366

Query: 366 RLEAV--AAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEV 417
            L  +         K+ ++     V L E     R+G  +       + I T +    E+
Sbjct: 367 VLSILLDKLGFEWGKSLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIATAKETSQEL 426

Query: 418 GS----------DSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVF------YVQYAYAR 460
           G           D  R + L      +L  D  K +    KE+  F      ++QY YAR
Sbjct: 427 GKLDGLTQEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYAR 486

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            +S+ R+A +        +    V+P   E    E  LI  +A++  V+  A     P  
Sbjct: 487 IQSVLRKAAEA------GIVIPQVLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSG 540

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A Y+YDL   ++  +           ++  N  + + R+ L   +A ++  G+ ++G+E
Sbjct: 541 IANYVYDLVKEYNQFYHD------FSILREENEDVKLFRVALSANIAKVVRLGMGLLGIE 594

Query: 581 SPNEM 585
            P+ M
Sbjct: 595 VPDRM 599


>gi|300706233|ref|XP_002995404.1| hypothetical protein NCER_101716 [Nosema ceranae BRL01]
 gi|239604486|gb|EEQ81733.1| hypothetical protein NCER_101716 [Nosema ceranae BRL01]
          Length = 561

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 119/530 (22%), Positives = 214/530 (40%), Gaps = 84/530 (15%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L P Y  +IL++I+  G ++GRN IG G  V I++ S N     H+GH R  ++G+ 
Sbjct: 82  NINLIP-YSYEILTTILEKGEDFGRNNIGNGETVVIDYSSPNIAKIFHMGHFRTTILGNF 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +  + AF GY+     Y+ D G Q   + L          ++N  +L     P  YL +V
Sbjct: 141 VKKIHAFCGYKAVGINYLGDWGKQFGLVLLG------SQRFSNPEELKTD--PIKYLFNV 192

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             +++   ++               D SV    K I + ++       +      F    
Sbjct: 193 YVQISQAKAT---------------DPSVDVEAKKIFEKMEK-GTDSSLLDKWSHFRELS 236

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST------MVGDDVDRP 323
            +  +++   L  +   Y G       KT Q  D+ +   L +++       +G + +  
Sbjct: 237 INKYKELYSKLGVEFEEYSG--ESFYEKTCQD-DIKKCNFLIKNSDGSVCLDLGKEKNPL 293

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           ++KSDG+  Y   D +  K +  R     +IYV+ S+   + + L A       +KA+I 
Sbjct: 294 VIKSDGTSLYLTRDFSAAKDRIARYNPKKLIYVVSSEQKEHFEDLFATL-----RKAEI- 347

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------EVGSDSVRF 424
               + +   + GM   MS R G    L  ++D                  ++   S   
Sbjct: 348 ---FDNLEHVQYGMVSGMSTRKGTVKFLEDIIDIATDVMMKQIDANPEKKAQIKDVSATA 404

Query: 425 MMLWRKNSELLDFDFCKVK---------EQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           + L      ++DF   ++K           + +    Y+QYA+ R +SI    KDI  DL
Sbjct: 405 LNLAVSTLIIMDFSAKRIKGYKFDVEKRAMNTKGTGIYIQYAHCRLKSIEDMNKDI--DL 462

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D+   +   ++ E     L L+     + +V+ ++    EP KL  Y+ +L       
Sbjct: 463 NKDIKIDSKCLEQEEI----LNLLYQFIWFEKVVISSFKDNEPNKLFTYVSNLC------ 512

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W     N  L+ V+     +   RLQ++     II + L + G+   N+M
Sbjct: 513 WLTNSYNSSLK-VKGEEPSVAKTRLQVLKCARLIIGTTLKLFGLTPLNKM 561


>gi|255011461|ref|ZP_05283587.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 597

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 132/605 (21%), Positives = 253/605 (41%), Gaps = 84/605 (13%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   +K +    + F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPAVAAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ +   ++L+ I     +YG     +    V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASAAWIELLNEIHADA-QYGIVSADENAPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199
           LA+++  +G +V +   +ND G  I    L+  W+     Y N  + PE          G
Sbjct: 145 LANIVMANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLVG 197

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKALNIQHD 257
            Y   + KH   E+A+     +     E   P++ + + + ++K    D  ++AL    +
Sbjct: 198 DYYVAFDKHYKAEVAELMEKGMTKEEAEAASPLMNE-AREMLVKWEAGDPEVRALWQMMN 256

Query: 258 IFISE--DDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-- 312
            ++ E  D+ +R     +    D +  +   Y EG     K K  +  +   K   F+  
Sbjct: 257 NWVYEGFDETYR----KMGVGFDKIYYESNTYLEG-----KEKVMEGLE---KGFFFKKE 304

Query: 313 -----STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
                + +  + +D + LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + +
Sbjct: 305 DGSVWADLTAEGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQ 364

Query: 366 RLEAV--AAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEV 417
            L  +         K+ ++     V L E     R+G  +       + I T +    E+
Sbjct: 365 VLSILLDKLGFEWGKSLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIATAKETSQEL 424

Query: 418 GS----------DSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVF------YVQYAYAR 460
           G           D  R + L      +L  D  K +    KE+  F      ++QY YAR
Sbjct: 425 GKLDGLTQEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYAR 484

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            +S+ R+A +        +    V+P   E    E  LI  +A++  V+  A     P  
Sbjct: 485 IQSVLRKAAEA------GIVIPQVLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSG 538

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A Y+YDL   ++  +           ++  N  + + R+ L   +A ++  G+ ++G+E
Sbjct: 539 IANYVYDLVKEYNQFYHD------FSILREENEDVKLFRVALSANIAKVVRLGMGLLGIE 592

Query: 581 SPNEM 585
            P+ M
Sbjct: 593 VPDRM 597


>gi|294885225|ref|XP_002771232.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239874712|gb|EER03048.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 602

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 233/582 (40%), Gaps = 104/582 (17%)

Query: 43  GHLSTNAAMILSR------PLGLD-PLTIAELIVARIKIDP--DVDSVFIAGKGFINLYL 93
           G    N AM L++      P G+  P  I E I + +  +   + +SV +A  GF+ + L
Sbjct: 41  GDYQCNNAMGLAKKFKSELPDGMKIPKQIGEKIKSNLMEESPEEFESVTVAPAGFVTVKL 100

Query: 94  SPSYLRKILSSIVVSGIEYGR---NLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGD 148
           S  ++ K L+S V+   + G+   +L  K    KV ++  S N    MHVGH R  ++G+
Sbjct: 101 SSGWIAKQLTSSVLGECKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLRSTILGE 160

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           T++ ++ +SG +V R  ++ D G Q   L   +   Y   L++          P V    
Sbjct: 161 TVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHT---------PEV---- 207

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDF 265
              +L   Y +    F EE   P  K  S + ++ +   D    KA  I  D  IS   F
Sbjct: 208 --SDLQTFYKAAKKRFDEE---PDFKKRSQEEVVALQSGDEYARKAWQICCD--ISRKSF 260

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK----CDMDRKQLLFRSTMVGDDVD 321
              +    R  I+ L  QG  +   +  P  +T +K     + +  + +F      DDV 
Sbjct: 261 ---EEVYNRLGIEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIFTDV---DDVP 314

Query: 322 RPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             ++KSDG Y Y + D+ A +    +   D ++Y+       + K+L  VA         
Sbjct: 315 MMVVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPP 374

Query: 381 INVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
              L  L   V    DG   K   R+G  + L  ++DE                      
Sbjct: 375 QTKLEYLGFGVVCGDDGKKFKT--RSGATVKLTDLLDEAEDRAKKELESRLNAGEGEAAG 432

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           +G  SVR+  L +  +    F+F K+ +  K N   ++ YAYAR
Sbjct: 433 RSTGLTEEEFDRASKIIGVASVRYFDLRQNRTTNYIFNFDKMLD-PKGNTAVFLLYAYAR 491

Query: 461 CRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             SI R+A  D    LD+      +  ++      E  L + +  +  V+++     + +
Sbjct: 492 ICSILRKANFDYHSGLDYSSEEVTITEEK------ERALALEILRFAEVMQSVLADLQCH 545

Query: 520 KLAFYLYDLASVFHGHWSHGR------ENPRLRFVQANNRKL 555
           +L  Y++DL + F   ++  +      E  RL   +A  R L
Sbjct: 546 RLCEYMWDLTNRFTAFYTECKVVGSDQERSRLLLCEATRRVL 587


>gi|288800432|ref|ZP_06405890.1| tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332645|gb|EFC71125.1| tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 606

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 131/575 (22%), Positives = 245/575 (42%), Gaps = 113/575 (19%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHV 138
           S F   KGF+N  ++P      L++I      +G   +   +  V IE+ S N   P+H+
Sbjct: 76  SGFNVVKGFLNFVVAPQAWVSQLNTIATEE-HFGEKAVQNDSPLVMIEYSSPNTNKPLHL 134

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R  ++G +L+ +M  +G +V +   +ND G  I    L+  W   Q   N ++    
Sbjct: 135 GHVRNNLLGWSLSQIMQANGNKVVKTNIVNDRGIHICKSMLA--W---QKWGNGETPETS 189

Query: 199 GYYPGVYL------------KHVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAM 241
           G   G +L            K   KEL  +Y +E L   +     ++  P++K+ + Q +
Sbjct: 190 GK-KGDHLVGDCYVAFDKHYKEECKELQKQYIAEGLTEEQAAEQAKEEAPLIKE-ARQML 247

Query: 242 MKIIRDDLKALNI----QHDIFISEDDFHRGDPSPIRDII----DNLARQGYVYEGILPP 293
           +K  ++D +  ++     + ++   D+ ++        I       L  +G V EG+   
Sbjct: 248 VKWEQNDPEVRSLWSMMNNWVYAGFDETYKKMGVSFDKIYYESDTYLEGKGKVEEGLA-- 305

Query: 294 PKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY 345
                        K L FR       + +  + +D+ LL +SDG+  Y   D+     ++
Sbjct: 306 -------------KGLFFRKDDNSVWADLSNEGLDQKLLLRSDGTSVYMTQDIGTADLRF 352

Query: 346 -ERGFDNMIYVMGSDHSGYVK----RLEAVAAAVSEKKAQINVLLCEL----------VR 390
            E   D MIYV+G++ + + +     L+ +  +  +     +  + EL            
Sbjct: 353 KEFPIDKMIYVVGNEQNYHFQVLSILLDRLGFSWGKDLVHFSYGMVELPNGKMKSREGTV 412

Query: 391 LYRDGMPIKM---SKRAGDFI-TLRHVVDE--------VGSDSVRFMML---WRKN---- 431
           +  D + ++M   +K A D    L+ + +E        VG  ++++ +L    RKN    
Sbjct: 413 VDADELMVEMINDAKEASDKADKLKDMSEEERAEIARIVGLGALKYFILKVDARKNMLFN 472

Query: 432 -SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             E +DF+          N   ++QY +AR  SI R+A     + +    P   + +++ 
Sbjct: 473 PEESIDFN---------GNTGPFIQYTHARICSILRKA-----NAENIAIPA-TLAEDAP 517

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  E  LI  L+EY   ++ A     P  +A Y Y+L   F+  +     +      +A
Sbjct: 518 LNEKETALIQKLSEYEMAVQQAGKDYSPSGIANYCYELTKEFNQFY-----HDYTILGEA 572

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +N K  M+RL L  +VA +I +G+ ++G+E P  M
Sbjct: 573 DNNK-KMVRLVLAKSVAKVIKNGMRLLGIEVPERM 606


>gi|83945321|ref|ZP_00957669.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83851155|gb|EAP89012.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 587

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 131/575 (22%), Positives = 235/575 (40%), Gaps = 98/575 (17%)

Query: 64  IAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT- 121
           +AE + AR+ ++ P ++ V IAG GF+N+  + +     + +I  +G+     + G+ + 
Sbjct: 58  VAEDVKARLAELHPHLE-VEIAGPGFLNITPAGN-----VYAIRANGLSEDDRVGGREST 111

Query: 122 ---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              ++ I+F   N   PMHVGH R +V+GD+L  LM F G++VT + ++ D G Q+  L 
Sbjct: 112 APKRLIIDFGGPNVAKPMHVGHLRSSVIGDSLQRLMRFRGHDVTSDIHLGDWGLQMGHLV 171

Query: 179 LSVFWRYQQALYNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             +       +Y  D+D    Y   P V ++ + + L  + S++    PE          
Sbjct: 172 TELEDEKPDLVY-YDADFTGPYPDEPPVTIEDLAR-LYPQASAKAKEDPERNARSRKATA 229

Query: 237 SVQA---------------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            +QA                +  +++D  AL +  D++  E D +   P  +RD  D   
Sbjct: 230 ELQAGRPGYRALLRHFINVSIAALKEDFGALGVHFDLWKGESDVNDLIPELVRDFKDRGV 289

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY- 340
            +      I+   +         D+K+L   + ++       L+ S GS  Y   DLA  
Sbjct: 290 AEESDGAWIVRVARED-------DKKEL---APLI-------LVSSQGSALYATTDLATI 332

Query: 341 FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINV-------------- 383
              K E+  +  +YV+    SDH   V R  A  A ++E+ A  +V              
Sbjct: 333 LDRKREQDPELTLYVVDLGQSDHFEQVFRA-AYKAGLAEEGALEHVKFGTVNGTDGKRLR 391

Query: 384 -------LLCELVRLYRDGMPIKMSKRA-GDFIT---LRHVVDEVGSDSVRFMMLWRKNS 432
                   L +L+   RD    ++++   G  +T      V   V + +++F  L    +
Sbjct: 392 TRAGGTFRLADLINEARDRARARLNEAGLGAELTSDEFETVARAVANAAIKFSDLQNVRT 451

Query: 433 ELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
               FD  + V  + K  P  Y+QY   R +S+ ++A D           + + P     
Sbjct: 452 TNYIFDLDRFVSFEGKTGP--YLQYQAVRIKSLLKKAGD-----------QGIAPGAVTI 498

Query: 492 -DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            D +E  LI  L  +   +  A   + P  L  + Y LA  F G ++          +  
Sbjct: 499 SDKAEEALIRRLDAFEGALSRAERDRAPNVLCEHAYGLAQAFSGFYAA------CPILPE 552

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +   RL+L     + +   L +IG++ P  M
Sbjct: 553 KDEAIRASRLRLAQTTLTQLEIVLGLIGIDVPERM 587


>gi|145343622|ref|XP_001416415.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
 gi|144576640|gb|ABO94708.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
          Length = 600

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 134/556 (24%), Positives = 214/556 (38%), Gaps = 88/556 (15%)

Query: 39  DCAH---GHLSTNAAMILSRPLG-------LDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +CA+   G   +++AM +   L          P  +A+ IVA I      DS+ IAG GF
Sbjct: 86  ECANTSLGDFQSSSAMQIFSALAKAGETSFRSPRDVADEIVAGISEREMFDSITIAGPGF 145

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN  LS +Y+R  L     S  E G  +      V ++F S N    MHVGH R  ++GD
Sbjct: 146 INFRLSDNYIRSELFRETKSA-ELGPTI---KRHVLVDFSSPNIAKEMHVGHLRSTIIGD 201

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGVYL 206
           TL ++  F GY  TR   +N  G       + + +  +  +  + S  DL   Y      
Sbjct: 202 TLCNVFEFCGYTTTR---VNHVGDWGTQFGMLIQFMKENGISPDSSVSDLQACYKQAKQK 258

Query: 207 KHVGKELADKYSSELLNF----PEEK--WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             V  +   K    ++      PE    W  I    + +A  + I D LK   ++     
Sbjct: 259 FDVDDDFKAKSKDMVVKLQSYDPETAHMWRQICS--ASRAEFQTIYDRLKIRIVEK---- 312

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++   PS    ++D L  +  + E                D   L   +    DD 
Sbjct: 313 GESFYNDMIPS----VLDELQSKRLIVE----------------DAGALCIFTE--SDDT 350

Query: 321 DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
                KSDG + Y + DLA  + +      D +IYV       + K +   A       A
Sbjct: 351 PVICRKSDGGFNYASTDLAAVRHRIMSEKADKIIYVTDQGQHKHFKAIFKTANEAGWGDA 410

Query: 380 QI-------NVLLCELVRLYRDGMPIKMSKRAGDFIT---LRHVVDEVGSDSVRFMMLWR 429
           Q+        V+L E      +    K  +  G  +T   ++H    +G  SV++  L  
Sbjct: 411 QVALEHVGFGVVLDEA-----EERCFKFLEEKGTNLTTDEIKHASKVLGVSSVKYADL-- 463

Query: 430 KNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +N+ L ++ F   +    K N   Y+QY++AR  +I +++        F   P       
Sbjct: 464 QNNRLTNYTFSFDRMLDLKGNTAMYLQYSHARVATILQKSS-------FAGRPDQFSISH 516

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPR 544
            E    E  L + + ++   +        P KL  YLY L S F+  ++     G +N  
Sbjct: 517 EE----ERLLAIQIIKFQDALLTTLQDLAPSKLCEYLYTLCSTFNNFYAECKVIGGDNEE 572

Query: 545 LRFVQANNRKLTMMRL 560
            R +    R L  M+L
Sbjct: 573 SR-IYLCERTLYTMKL 587


>gi|315144839|gb|EFT88855.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 563

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  +++K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDDQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKKAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|257421892|ref|ZP_05598882.1| arginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163716|gb|EEU93676.1| arginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315155401|gb|EFT99417.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 563

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  +++K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDDQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|255513612|gb|EET89878.1| arginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 632

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 31/319 (9%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G +S N A  +++ +   P  +A  I++ I     V SV     GFIN YL     RK  
Sbjct: 44  GDISCNIAFRIAKSISRKPADVASSIISGIGGIEAVKSV-KEENGFINFYLD----RKKF 98

Query: 103 SSIVVSGIEYG-----RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +++V+  +  G     ++ IG G  V +E  SANP  P+H+G  R A++G+ LA++ A  
Sbjct: 99  TALVMEWLLKGGSNAVKSTIGSGKIVVVESPSANPVHPLHMGQVRNALIGNVLANIYAVC 158

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELA 214
           GY+V RE YI+D G Q+      +    +  +  N +   +     VY+   K+      
Sbjct: 159 GYKVEREDYIDDLGFQVAQAVWGLMHLEELGIEINPNGKFDHEIGKVYVEVNKYAETHEI 218

Query: 215 DKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            +  +++L   E+   +  ++   S +  +    + L  LNI HD+ + E D        
Sbjct: 219 KEDIAKVLTLMEQDGTYESVLCRDSAEKYVMAEYETLFELNIYHDLLVWESDI------- 271

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLL---FRSTMVGDDVDRPLLK 326
           IR+ +   A +    +G++  PK      C     DR + L   FR+  + ++V + L++
Sbjct: 272 IREKLFEKAMKIMEDKGVIDRPKEGKYAGCAIISFDRIKDLPEEFRN--LKENV-KVLVR 328

Query: 327 SDGSYTYFAADLAYFKCKY 345
           S+G+  Y A D+A+   K+
Sbjct: 329 SNGTPDYVAKDIAFHMWKF 347



 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           +  +V   ++RF  L   N + L+F +   +  + +  P  Y QY +AR   I     + 
Sbjct: 473 IAAKVALAAIRFEFLRLSNEKKLNFSWATALNFEGRSGP--YCQYMFARANRILENYGNE 530

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                  +  ++ I      D  E +L+  ++    V+E +    +P  L  Y  +LA +
Sbjct: 531 ------GVLYKSTIKVSGIEDDLEFELVKKMSGCVTVLERSCRELKPNLLVEYAGELALL 584

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   + H      +  +Q  + KL+  RL++V     ++++ L ++GVE  ++M
Sbjct: 585 FGKFYEH----KNILKLQDEDEKLS--RLEIVTCFKVVMDAVLTVLGVEPLSKM 632


>gi|226939931|ref|YP_002795004.1| arginyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782968|sp|C1D5W4|SYR_LARHH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226714857|gb|ACO73995.1| Syr [Laribacter hongkongensis HLHK9]
          Length = 573

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 1/135 (0%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M  ++   ++P  +A+ ++ ++ +      + IAG GFIN+ L+P +L K L
Sbjct: 36  GDFQANGVMAAAKQRKMNPRELAQQVIDKLDLAGIASKIEIAGPGFINITLAPDFLAKRL 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + V+     G   + +  +V +E+ S N    MHVGH R  ++GDTLA ++ F G  + 
Sbjct: 96  DT-VLDDARLGVRSVTEPQRVMVEYSSPNLAKEMHVGHLRSTIIGDTLARVVEFLGNNMV 154

Query: 163 REYYINDAGAQINTL 177
           R  ++ D G Q   L
Sbjct: 155 RGNHVGDWGTQFGML 169



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 76/311 (24%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---- 371
           GD +   + K DG + Y   DL   + ++ E   D +IYV+ +  S + +++  +     
Sbjct: 297 GDPMGVIVQKKDGGFLYTTTDLGAVRYRHKELNLDRVIYVVDARQSQHFQQMFTICRKAG 356

Query: 372 ---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
               A+S +      ++ +      DG P K   R+G  + L  ++DE            
Sbjct: 357 FAPEAMSLEHVGFGTMMGD------DGKPFKT--RSGGTVKLIELLDEAEERAYALVSEK 408

Query: 417 ---------------VGSDSVRFMMLWR-KNSE-LLDFDFCKVKEQSKENPVFYVQYAYA 459
                          VG  +V++  L + +NS+ + ++D     E    N   Y+QYAY 
Sbjct: 409 NPDLPEEEKRKIAHAVGIGAVKYADLSKNRNSDYIFNWDLMLAFEG---NTAPYLQYAYT 465

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SIFR+         FD     +I +      +E QL + LA++  V+        P+
Sbjct: 466 RVASIFRKVD------RFDASAPLLITE-----PAEKQLALMLAQFSDVLNEVARTCFPH 514

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGL 574
            L  YLY +A+ F            +RF +A     +       RL+L    A  + +GL
Sbjct: 515 LLTQYLYQVATQF------------MRFYEACPILKSEGATQASRLKLARITADTLKTGL 562

Query: 575 NIIGVESPNEM 585
            ++G+E    M
Sbjct: 563 GLLGIEVLESM 573


>gi|89891117|ref|ZP_01202625.1| arginyl-tRNA synthetase, ArgRS [Flavobacteria bacterium BBFL7]
 gi|89516761|gb|EAS19420.1| arginyl-tRNA synthetase, ArgRS [Flavobacteria bacterium BBFL7]
          Length = 593

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 139/633 (21%), Positives = 257/633 (40%), Gaps = 138/633 (21%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L+ + I   R   +G L+     +L R +  +P  I E I A +    D+ + +   KGF
Sbjct: 23  LENVEITLTRKDQNGDLTVMVFPML-RHIKGNPAVIGEQIGAELA-KTDLITSYEVIKGF 80

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N+ ++     K  + I+ S  +YG++ + K  + V +E+ S N   P+H+GH R  ++G
Sbjct: 81  LNITVAHEVYLKDFNDIL-SQSDYGKSPVDKTKSGVMVEYSSPNTNKPLHLGHVRNNLLG 139

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE--------- 198
            ++A ++  +G +V +   IND G  I    L+  W      Y N  + PE         
Sbjct: 140 YSVAQIVEATGRKVNKTQIINDRGIHICKSMLA--WEQ----YGN-GETPESTGLKGDKL 192

Query: 199 -GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            G Y   + +   KE+AD  ++       +K  P     S+ A  +++R           
Sbjct: 193 VGNYYVKFDQEYKKEIADLIAAGKTEEEAKKEAP-----SLIAAQEMLR----------- 236

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQKCDMDRKQLLFRST- 314
                  + +GD + +      L ++  G+VY+G        T +   ++   L + S  
Sbjct: 237 ------KWEQGDEAVVA-----LWKKMNGWVYDGF-----ETTYKNLGVNFDSLYYESNT 280

Query: 315 -MVGDDV---------------------------DRPL-LKSDGSYTYFAADL--AYFKC 343
            ++G DV                           DR + L+SDG+  Y   D+  A  + 
Sbjct: 281 YLLGKDVVQIGLDKGVFEKDPDGSVWIDLTDEGLDRKIVLRSDGTAVYMTQDIGTAIQRV 340

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSK 402
           K +   ++M+Y +G++   + K L  +   +    A+ +  L   +V L       KM  
Sbjct: 341 K-DHDINSMVYTVGNEQDYHFKVLFLILKKLGYDWAENLYHLSYGMVELPSG----KMKS 395

Query: 403 RAGDFI-----------TLRHVVDE------------------VGSDSVRFMMLWRKNSE 433
           R G  +           T R +  E                  +G  ++++ ML     +
Sbjct: 396 REGTVVDADELMEEMTDTAREIAQEQGKLEGMSDADKGDLYKMIGLGALKYFMLKVDPKK 455

Query: 434 LLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
            + FD  + V  Q    P  ++QY +AR +SI +++     DL         +  +    
Sbjct: 456 SMMFDPKESVDFQGNTGP--FIQYTHARIKSILKKSGFEQGDLK--------VATDLALT 505

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             +  +I  L +YP  IE A     P  +A Y+Y+L   F+  + +    P++  V+ +N
Sbjct: 506 DKDAAVIKLLQQYPETIEAAARNYSPALVANYVYELVKEFNSFYQN---VPKI--VEESN 560

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL L    A++I S   ++G+E P +M
Sbjct: 561 TNMKQFRLALCFKTAAVIKSACGLLGIEVPEQM 593


>gi|311747338|ref|ZP_07721123.1| arginine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126579055|gb|EAZ83219.1| arginine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 596

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 127/594 (21%), Positives = 229/594 (38%), Gaps = 132/594 (22%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I E + A +   P+V + F   KGF+NL L+      +   +     E    L   G KV
Sbjct: 63  IGEYLKANV---PEV-AGFNVVKGFLNLELNELIWLDVFQGLYAD--ESLGQLPSNGQKV 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+ S N   P+H+GH R   +G ++A ++  +GYEV +   +ND G  I   ++  + 
Sbjct: 117 MVEYSSPNTNKPLHLGHLRNNFLGYSVAEILKANGYEVIKANLVNDRGIHI-CKSMVAYQ 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           ++        S L   +  G Y     KE    Y  E++   E       K YS +   K
Sbjct: 176 KFGNGETPESSGLKGDHLAGKYYVIFDKE----YKKEIVALKE-------KGYSEEEAKK 224

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQK 301
                         + +   +  R   +   ++I +L +Q   +VY G     K+  T  
Sbjct: 225 -----------NAPLLLEAQEMLRKWEAKDEEVI-SLWKQMNAWVYAGF---DKTYQTMG 269

Query: 302 CDMD--------------------RKQLLFRST-------MVGDDVDRPL-LKSDGSYTY 333
            D D                    + ++ F+         + G+ +D  L L+SDG+  Y
Sbjct: 270 VDFDKYYYESDTYLLGKDIVEEGLKNEVFFKKENGSVWVDLSGEGLDEKLVLRSDGTSVY 329

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+     KY+    D  +YV+G++   +   L  +              + +L R Y
Sbjct: 330 ITQDMGTADLKYDDFKIDKSVYVVGNEQDYHFDVLFKI--------------MQKLGRPY 375

Query: 393 RDGM-----------PIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSE---- 433
            +G+             KM  R G  +     ++ +VD     +     +   N E    
Sbjct: 376 GNGLYHLSYGMVDLPSGKMKSREGTVVDADDLMQEMVDTAAKHTEELGKIDGFNKEQAAE 435

Query: 434 -------------LLDFDFCK---------VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                        LL  D  K         ++ Q    P  ++QY++AR +SI R+A  I
Sbjct: 436 LYEILGLGALKYFLLKVDPKKRMLFNPQESIEFQGNTGP--FIQYSHARIKSILRKADQI 493

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +     + +  +   ++ + SE  LI  L ++ + I+ A     P  +A YL+DLA  
Sbjct: 494 GVE-----YQKPDLSGITKLEESESSLIFMLGDFKKKIKLAGDDLAPSIIAQYLFDLAKE 548

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  ++       L     ++  +  +R+ L    A  IN G++++G++ P  M
Sbjct: 549 YNRFYAD------LPIFHESDNAIQALRVALSALTAKTINKGMSLLGIQVPERM 596


>gi|238916469|ref|YP_002929986.1| arginyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871829|gb|ACR71539.1| arginyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 588

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 128/609 (21%), Positives = 243/609 (39%), Gaps = 106/609 (17%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V  RP  C       N AM  ++     P  IA+ +VA++  +     +     GFIN+ 
Sbjct: 30  VSNRPDLC---EFQCNGAMAAAKAYKKAPFMIADEVVAKLADNKMFSKIESVKPGFININ 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   YL   L+ +  +  ++G         V +++  AN   P+HVGH R AV+G+++  
Sbjct: 87  ICEDYLAGYLNEMSETE-KFGYVNSESNKTVIVDYGGANAAKPLHVGHLRSAVIGESVKR 145

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-- 210
           +  F G +   + ++ D G Q+  +   +  R  +  Y +DS      + G Y +     
Sbjct: 146 INTFVGNKTIGDVHLGDWGLQMGLIIEELRDRKPELPYFDDS------FTGEYPEEAPFT 199

Query: 211 -KELADKY------SSELLNFPEEKWLPIVK----DYSVQA----MMKIIRDDLKA---- 251
             EL + Y      S E + F E      +K    D + +A    +M + + DLK     
Sbjct: 200 ISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRAIWHHIMNVSKADLKKNYDN 259

Query: 252 LNIQHDIFISEDDFHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           LN+  D++  E      D  P I D+++ +   G  YE       S+     D+ ++   
Sbjct: 260 LNVHFDLWKGE-----SDAQPYIDDMVNKMIADGIAYE-------SQGATVVDIQQE--- 304

Query: 311 FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
                 GD  + P   + KSDG+  Y  +DLA    + E+ +    Y+  +D     + L
Sbjct: 305 ------GDTKELPPCIVRKSDGAALYATSDLATI-VEREKLYHPDTYIYLADKR---QEL 354

Query: 368 EAVAAAVSEKKAQINVLLCEL------VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
                  + KKA I     ++          +DG P K   R+G  + L H++ ++    
Sbjct: 355 HFTQVFRTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKT--RSGGVMRLEHLIADIDEAV 412

Query: 422 VRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVF--------------YVQY 456
              +M  R   E    D  K+             Q+ ++ VF              Y+ Y
Sbjct: 413 YEKIMSNRTVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILY 472

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
              R +SI  +  +       +    N +   +  + SE  L + L ++  +I+ A    
Sbjct: 473 TIVRIKSILNKYTE-------NGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDN 525

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+K+  ++Y++++ F+G + +       + +   +       + L+    SI+   +++
Sbjct: 526 APHKICQFIYEVSNAFNGFYHNN------KILSEPDEAKKASYIALISLTKSILEQCIDL 579

Query: 577 IGVESPNEM 585
           + +E P+ M
Sbjct: 580 LAIECPDRM 588


>gi|325473427|gb|EGC76622.1| arginyl-tRNA synthetase [Treponema denticola F0402]
          Length = 590

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 121/598 (20%), Positives = 249/598 (41%), Gaps = 88/598 (14%)

Query: 27  KIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI-- 83
           KIL ++I IE P +   G ++       ++     P  IA  + AR+  + D+    +  
Sbjct: 26  KILPEQINIETPPNPEMGDVAF-PLFTFAKSFKSSPAKIASDVCARLLENEDIKKYGMPK 84

Query: 84  AGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A   ++N++L+   L   +L  ++     YG+     G ++ IEF S N   P+H+GH R
Sbjct: 85  AIGPYLNVFLAKGDLASNVLDKVLKEKENYGKTSSLSGKRIMIEFSSPNTNKPLHLGHLR 144

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
              +G++++ ++ F G +V +   IND G  I   ++  + ++ +       ++    + 
Sbjct: 145 NDALGESISRILKFCGADVFKVNIINDRGVHI-CKSMIAYQKFGEGKTPESENIKSDRFV 203

Query: 203 G---VYLKHVGKELADKYSSE----LLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALN 253
           G   V      +E  +K  +E    LL++   E K L  +        ++ I++  K   
Sbjct: 204 GDMYVAFHKYSQENPEKAEAEAKQMLLDWEAGENKELIGLWKKMNGWAIEGIKETYKRTG 263

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNL---ARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           I  D ++   + + +G    ++ +   +      G V+  + P           +D+K L
Sbjct: 264 ISFDKLYFESETYLKGKDQILKGLEAGVFYKEEDGSVWVDLAP---------IKLDKKVL 314

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLE 368
                          L+SDG+  Y   D+     +++   F+ MIYV+G++   + K L 
Sbjct: 315 ---------------LRSDGTSLYMTQDIGTAISRHKDWPFNQMIYVVGNEQEYHFKVLF 359

Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            V   +  E    +  L   +V L       KM  R G  +    +++ +  ++++ +  
Sbjct: 360 YVLKQLGFEWADDLYHLSYGMVNLPEG----KMKSREGTVVDADDLINSLQDEALKKIEE 415

Query: 428 WRKNSELLD------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461
             +  E+ D              +  ++   K++ +F              Y+QY  AR 
Sbjct: 416 NGREKEVGDAAVAAENIAVGALHYFLLQVSPKKDMLFNPKESLSFTGNTGPYLQYMGARI 475

Query: 462 RSIFRQAK--DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
            SI R+A+  +    L       +++  ESE+      L+  L ++P  +E + + ++P 
Sbjct: 476 SSILRKAETAEGKEKLKNGKLNASLLTNESEW-----ALLKTLEDFPEQVERSALRKDPS 530

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            L  YLY+L+  F   +   R+ P    +   N  L+  R++L  A   ++ + +N++
Sbjct: 531 ALTAYLYELSKAFSRFY---RDCP---ILSGENADLSYTRMELARATKIVLQNAMNLV 582


>gi|283778010|ref|YP_003368765.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436463|gb|ADB14905.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 651

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 1/145 (0%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +I   +D   G    N AM L   LG  P  IA  ++A  K+D   +   +AG GFINL 
Sbjct: 28  MIRPSQDAKFGDYQANFAMPLKAKLGKAPQQIAADVIAATKLDDLCEPATVAGPGFINLK 87

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              S+L + L+ + VS  + G     +     ++F S N   PMHVGH R  V+GD+L  
Sbjct: 88  FRDSWLEERLN-LAVSDPQLGIAPTAQPRTYIVDFSSPNVAKPMHVGHIRSTVIGDSLCK 146

Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177
           ++   G+ V  + ++ D G Q   +
Sbjct: 147 ILRALGHHVVSDNHLGDWGTQFGMI 171



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D P+L  K DG++ Y   DLA  + + ER   D + YV+    S +  +L   A A    
Sbjct: 373 DAPMLVRKRDGAFLYATTDLATIQYRQERWKPDAIWYVVDHRQSEHFDKLFIAAKAWGYT 432

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
              +  +    V L  DG P K   R+GD + L  ++DE                     
Sbjct: 433 NTDLTHVKFGTV-LGDDGKPFKT--RSGDTVGLDGLLDEAISRALAIVQSSSSDLSPEEQ 489

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  ++++  L +  +    F + K+  Q   N   Y+QY+YAR RSIF +   
Sbjct: 490 QQVAERVGIGALKYADLSQNRTSDYTFSYDKML-QMNGNTATYMQYSYARVRSIFSRG-- 546

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              ++D     R      +  + +E  L + L  +   +  A     P+ L  YL+DLA 
Sbjct: 547 ---NIDIAAL-RTSGALIALTEPAERALGLSLLRFEEALAEAVATAMPHHLTTYLFDLAK 602

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   +    EN   + ++A++      RL L    A  I  GL+++G++    M
Sbjct: 603 SYSTFF----EN--CKVLKADDEATKNSRLLLCDLTARTIKHGLSLLGIDVVERM 651


>gi|219114449|ref|XP_002176395.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402641|gb|EEC42631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 564

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 124/538 (23%), Positives = 215/538 (39%), Gaps = 74/538 (13%)

Query: 42  HGHLSTNAAMILSRPLGLD---------PLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91
           HG    NAAM +   L  D         P  +A  ++A I    P +  + + G GF+  
Sbjct: 4   HGDYQCNAAMPVFAALKKDSSMPDNIRSPPDVARALMAAIGDTHPVIMELSMNGPGFVLC 63

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            + PS+L   +   + +GI   + LI K T V ++F S N    MHVGH R  ++G+ + 
Sbjct: 64  RIRPSFLETHVDRFLQTGI-LPKPLIPKQTCV-VDFSSPNIAKEMHVGHLRSTIIGEAVC 121

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYLKHVG 210
            ++ F G++V R  ++ D G Q   L   +   Y + A +N+D D  +   P +      
Sbjct: 122 RILEFVGHDVHRINHVGDWGTQFGMLIQYLKEEYPEVANHNSDVD-DQAALPNI------ 174

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +L   Y S    F E          +V A+     + L+   +  D  +S  +F +   
Sbjct: 175 TDLTQFYKSAKARFDESADFKKTSQTNVVALQSGDPECLRIWKLLCD--VSRQEFEK--V 230

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328
               D+  +   + + Y   +PP  ++      +  ++   +   V D    PL+  KSD
Sbjct: 231 YQRLDVTTHEFGESF-YNAKIPPVIAEFEAAGKISVEEGGAKCVFV-DKFKVPLMLQKSD 288

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLL 385
           G Y Y + D+A  K +  E   D +I +       + K + A    +   ++  Q+  + 
Sbjct: 289 GGYGYDSTDMAALKYRLQELKADRIIVITDFSQGDHFKMVYAAGRDIGWLDRNQQLEHIG 348

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
              V+   DG   K   R+GD + L  ++DE                             
Sbjct: 349 FGTVQ-GEDGKRFKT--RSGDTVRLVDLLDEAVERMEGSLRERIESDKSNIALDEVHDIA 405

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             +G  +V++  L R  +    F + ++ +   +  V Y+ YA  R  SI  +AK     
Sbjct: 406 EAIGYGAVKYYDLRRNPTTNYKFSYDQMLDTKGDTGV-YLLYARVRLESIVAKAKQ---- 460

Query: 475 LDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            D+ +    +I    +      SE  L+  L ++P VIE       PY +  Y+Y LA
Sbjct: 461 -DYSIDVEELIQNGEKVRLTHPSERNLVFQLQQFPDVIEQTLEDLFPYHVCEYVYKLA 517


>gi|254526915|ref|ZP_05138967.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538339|gb|EEE40792.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 604

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 151/655 (23%), Positives = 262/655 (40%), Gaps = 130/655 (19%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65

Query: 63  TIAE----LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIEYGRN 115
            I+     L+     I     S+ IAG GFIN+ L  + L  +I S+I    +GI   R 
Sbjct: 66  DISNDFINLLNKNKSISKLCKSLEIAGPGFINIKLKDAVLINEIKSNIQCNRAGITLIRK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            +  G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D G Q
Sbjct: 126 DLDSGFSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----ELADKYSSELLNFPEEKW 229
              L   +     + LY+ND            L+ +GK    +L + Y      F  E  
Sbjct: 186 FGMLITQL-----KDLYSND------------LEEIGKIKISDLVEFYKESKKRFDNESE 228

Query: 230 LPIVKDYSVQAMMKIIRDDLKALN---------------IQHDIFISEDDFHRGDPSP-I 273
               +  S + ++K+ R D+K++                I  ++ I  ++      +P +
Sbjct: 229 F---QKRSREEVVKLQRGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNPFL 285

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSDG 329
           + +ID+L  +  + E            KC       +F   M   +  +PL     K DG
Sbjct: 286 KSVIDDLNLKKILVED--------QGAKC-------VFLDGMTNKE-GKPLPLIIQKKDG 329

Query: 330 SYTYFAADLAYFKCKYER---GFD--NMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQI 381
            + Y   DLA  + ++ +   G D   +IYV     ++H   V ++   A  + E + Q+
Sbjct: 330 GFNYATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPENR-QV 388

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
           + +   LV+   DG  +K   R G+ I L+ +++E                         
Sbjct: 389 DHVPFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLKDEERYETEEFI 445

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +G  +V++  L +       F F K+   +  N   Y+ Y   R   I R+   
Sbjct: 446 ANTSRIIGLGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKRKNDF 504

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           ++   DF       +  E +   SE +LI  L ++  VI +      P +L  YL++L  
Sbjct: 505 VYDSKDF-----QYVNYEHK---SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQ 556

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F+  +      P L+      + + + RL L    A  +   L ++G+E+   M
Sbjct: 557 TFNRFYDQV---PILK----EEKYIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|42526483|ref|NP_971581.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81412594|sp|Q73P28|SYR_TREDE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|41816676|gb|AAS11462.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 590

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 123/601 (20%), Positives = 252/601 (41%), Gaps = 94/601 (15%)

Query: 27  KIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI-- 83
           KIL ++I IE P +   G ++       ++     P  IA  + AR+  + D+    +  
Sbjct: 26  KILPEQINIETPPNPEMGDVAF-PLFTFAKSFKSSPAKIASDVCARLLENEDIKKYGMPK 84

Query: 84  AGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A   ++N++L+   L   +L  ++     YG+     G ++ IEF S N   P+H+GH R
Sbjct: 85  AIGPYLNVFLAKGDLASNVLDKVLKEKENYGKTSSLSGKRIMIEFSSPNTNKPLHLGHLR 144

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
              +G++++ ++ F G +V +   IND G  I   ++  + ++ +       ++    + 
Sbjct: 145 NDALGESISRILKFCGADVFKVNIINDRGVHI-CKSMIAYQKFGEGKTPESENIKSDRFV 203

Query: 203 G---VYLKHVGKELADKYSSE----LLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALN 253
           G   V      +E  +K  +E    LL++   E K L  +        ++ I++  K   
Sbjct: 204 GDMYVAFHKYSQENPEKAEAEAKQMLLDWEAGENKELIGLWKKMNGWAIEGIKETYKRTG 263

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNL---ARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           I  D ++   + + +G    ++ +   +      G V+  + P           +D+K L
Sbjct: 264 ISFDKLYFESETYLKGKDQILKGLEAGVFYKEEDGSVWVDLAP---------IKLDKKVL 314

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLE 368
                          L+SDG+  Y   D+     +++   F+ MIYV+G++   + K L 
Sbjct: 315 ---------------LRSDGTSLYMTQDIGTAISRHKDWPFNQMIYVVGNEQEYHFKVLF 359

Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            V   +  E    +  L   +V L       KM  R G  +    +++ +  ++++ +  
Sbjct: 360 YVLKQLGFEWADDLYHLSYGMVNLPEG----KMKSREGTVVDADDLINSLQDEALKKIEE 415

Query: 428 WRKNSELLD------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461
             +  E+ D              +  ++   K++ +F              Y+QY  AR 
Sbjct: 416 NGREKEVGDAAVAAENIAVGALHYFLLQVSPKKDMLFNPKESLSFTGNTGPYLQYMGARI 475

Query: 462 RSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            SI R+A     K+   D   +    +++  ESE+     +L+  L ++P  +E + + +
Sbjct: 476 SSILRKAETAEGKEKLKDGKLN---ASLLTNESEW-----ELLKTLEDFPEQVERSALRK 527

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  L  YLY+L+  F   +   R+ P L    A+   L+  R++L  A   ++ + +N+
Sbjct: 528 DPSALTAYLYELSKAFSRFY---RDCPILSGEDAD---LSYTRMELARATKIVLQNAMNL 581

Query: 577 I 577
           +
Sbjct: 582 V 582


>gi|46204895|ref|ZP_00209614.1| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 160

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 7/145 (4%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+++E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLIRSGRLPEGLDLSRVLVEPPRDPSHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP V    +AG GFINL L P    +++ + +  G  YGR  +  
Sbjct: 61  NPKALGEALAEELRGDPRVSEASVAGPGFINLRLVPEVFHEVIRAALKDGEAYGRAQMAA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCA 144
               +    S +P  P   G C  A
Sbjct: 121 ARSTS----STSP--PTRPGRCMSA 139


>gi|288803789|ref|ZP_06409217.1| tRNA ligase [Prevotella melaninogenica D18]
 gi|288333776|gb|EFC72223.1| tRNA ligase [Prevotella melaninogenica D18]
          Length = 606

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 123/574 (21%), Positives = 226/574 (39%), Gaps = 122/574 (21%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ +    +L+ I        + +  +   V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTDESPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-------QQALYNNDSDLPE 198
           +G +LA +M  +G +V +   +ND G  I    L+  W+        +QA    D  + +
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--WQKWGNGITPEQAGKKGDHLIGD 198

Query: 199 GYYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            Y   ++ KH     K+L ++Y  E +   E K              K    +   +   
Sbjct: 199 FYV--LFDKHYKEECKQLQEQYEKEGMTADEAK--------------KKAEHEAPLIKEA 242

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT---------------- 299
           HD+ +    +   DP  IR + + +    +VY G     K+                   
Sbjct: 243 HDMLVK---WEANDPE-IRALWEKM--NNWVYAGFDETYKAMGVGFDKIYYESNTYLVGK 296

Query: 300 QKCDMDRKQLLF--------RSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGF 349
           +K +   ++ LF         + +  + +D+ LL + DG+  Y   D+   + ++ +   
Sbjct: 297 KKVEEGLEKGLFIRKEDNSVWADLTNEGLDQKLLLRKDGTSVYMTQDIGTAEMRFNDYPI 356

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI- 408
           D MIYV+G++ + + + L  +   +  K  +  V     +    +G   KM  R G  + 
Sbjct: 357 DKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVD 413

Query: 409 ---------------------TLRHVVDE--------VGSDSVRFMML---WRKN----- 431
                                 L  + +E        VG  ++++ +L    RKN     
Sbjct: 414 ADDLVASMIENAKSLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNMLFNP 473

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            E +DF+          N   ++QY YAR RSI R+A+     L   L        ++  
Sbjct: 474 EESIDFNG---------NTGPFIQYTYARIRSILRKAEAQNITLPATL------NDDAPL 518

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E+ LI  L ++   +  A I   P  +A Y Y+L   F+  +           + A+
Sbjct: 519 NEKEIALIQKLNDFGAAVAQAGIDYSPSGIANYCYELTKEFNQFYHD------YSILNAD 572

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + RL +   VA +I +G+ ++G+E P  M
Sbjct: 573 TEAEKIARLMIAKNVAKVIKNGMALLGIEVPERM 606


>gi|227519810|ref|ZP_03949859.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227072748|gb|EEI10711.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 563

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANRDEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  +++K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDDQK--GARLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++ ++V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|281421436|ref|ZP_06252435.1| arginine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404508|gb|EFB35188.1| arginine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 606

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 127/567 (22%), Positives = 239/567 (42%), Gaps = 109/567 (19%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P+    +L++I     ++G   + + +  V IE+ S N   P+H+GH R  
Sbjct: 82  KGFLNLSIAPAAWVGLLNTINADP-KFGEKPVTENSPLVMIEYSSPNTNKPLHLGHVRNN 140

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------ 198
           ++G +LA +M  +G +V +   +ND G  I    L+  W     L   + + PE      
Sbjct: 141 LLGWSLAQIMEANGNKVIKTNIVNDRGIHICKSMLA--W-----LKWGNGETPETSGKKG 193

Query: 199 ----GYYPGVYLKHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
               G Y   + KH  +E+A        D    E      +   P++K+ + + ++K   
Sbjct: 194 DHLIGDYYVAFDKHYREEIAELKAQYMKDGMDEEAATEKAKVEAPLIKE-AHEMLVKWEN 252

Query: 247 DD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQK 301
           +D  ++AL   + + ++   D+ ++     +    D +  +   Y EG     K K  + 
Sbjct: 253 NDPEVRALWQKMNNWVYAGFDETYK----MMGVSFDKIYYESNTYLEG-----KKKVEEG 303

Query: 302 CDMDRKQLLFR-------STMVGDDVDRP-LLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
            +   K L FR       + +  + +D+  LL+SDG+  Y   D+     +++    D M
Sbjct: 304 LE---KGLFFRKDDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTADLRFKDFPIDKM 360

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRL------YRDGMPIKMSKRAG 405
           IYV+G++ + + + L  +   +  K  +  V     +V L       R+G  +       
Sbjct: 361 IYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNGKMKSREGTVVDADDLMA 420

Query: 406 DFIT-LRHVVDE------------------VGSDSVRFMML---WRKN-----SELLDFD 438
           + I   R   DE                  VG  ++++ +L    RKN      E +DF+
Sbjct: 421 EMIKDARQTSDELGKFKDMSEEERQEISRIVGLGALKYFILKVDARKNMLFNPEESIDFN 480

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                     N   ++QY YAR RSI R+A     ++  +L        ++  +  E+ L
Sbjct: 481 ---------GNTGPFIQYTYARIRSIMRKAAAEGIEIPAEL------GADAPINEKEIDL 525

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           I  + ++   + +A     P  +A Y Y+L   F+  +           + A +    + 
Sbjct: 526 IQKMNDFAAAVADAGNNYNPGGIANYCYELTKEFNQFYHD------YSILNAESEAEKIT 579

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L   VA I+ +G++++G+E P  M
Sbjct: 580 RLVLAANVAKILKNGMSLLGIEVPERM 606


>gi|167648344|ref|YP_001686007.1| arginyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083526|sp|B0T019|SYR_CAUSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167350774|gb|ABZ73509.1| arginyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 613

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 134/609 (22%), Positives = 247/609 (40%), Gaps = 108/609 (17%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N A+  ++    +P  IA  +V  +K DP + SV IAG GFIN+ +S   L  I ++ + 
Sbjct: 42  NGALAAAKSAKRNPREIAVQVVDVLKADPRLASVEIAGVGFINMRVSTDAL-SIRANEIA 100

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +    G   +    +V +++   N   PMHVGH R +++G+++  L  F G +V  + + 
Sbjct: 101 ADPRAGAEPLAHPRRVLVDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHF 160

Query: 168 NDAGAQINTLALSVFWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-- 223
            D G Q+  L  ++     + +AL     + P  +      K V  E A + + + L+  
Sbjct: 161 GDWGFQMGLLISAIMEEDAFIRALLERLVEAPREFSKADEDK-VMSEFAQRVTLDDLDRL 219

Query: 224 FP----EEKWLPIVKDYSVQAMMKI---------------------IRDDLKALNIQHDI 258
           +P     +K  P  K+ + +A  ++                     +  +  AL +  D+
Sbjct: 220 YPAASARQKEDPEFKEKARKATAELQNGRFGYRLLWRHFVNISRVALEREFHALGVDFDL 279

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----KTTQKCDMDRKQLLFRST 314
           +  E D        ++D+I  + RQ  V +G+L   +     +  +  +  +K+L   S 
Sbjct: 280 WKGESD--------VQDLIAPMVRQLEV-KGLLVDDQGARIVRVARPGETKKKKLPDGSV 330

Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAY-------------FKCKYERGFDNMIYVMGSD 359
           +  +  D PLL   S+GS  Y   DLA                C  +R  D+   V  + 
Sbjct: 331 VEVESPD-PLLVVSSEGSAMYGTTDLATILDRRKSFDPHLILYCVDQRQADHFEQVFRAA 389

Query: 360 H-SGYVK--RLEAVAAAVS--------EKKAQINVLLCELVRLYRD---------GMPIK 399
           + +GY +   LE +             + +A   + L +L+ + R+         G+  +
Sbjct: 390 YLAGYAEPGSLEHIGFGTMNGSDGKPFKTRAGGVLKLHDLIEMAREKARERLREAGLGAE 449

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQY 456
           +S+ A           +VG  +++F  L  +R  S + D D F     + K  P  Y+ Y
Sbjct: 450 LSQEA-----FEETAHKVGIAALKFADLQNFRGTSYVFDLDRFTSF--EGKTGP--YLLY 500

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
              R +SI R+A +        +    +I  E     +E  L + L  +   +  A   +
Sbjct: 501 QSVRIKSILRKAAEQ------KVVSGAIIVGE----PAERDLTLLLDAFEGALSEAYDKK 550

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P  +A + Y LA  F   ++          + A+N      RL L       +   L++
Sbjct: 551 APNFIAEHAYKLAQTFSKFYAA------CPILSADNDATRASRLALAETTLKQLELALDL 604

Query: 577 IGVESPNEM 585
           +G+E+P  M
Sbjct: 605 LGIEAPERM 613


>gi|210609959|ref|ZP_03288188.1| hypothetical protein CLONEX_00372 [Clostridium nexile DSM 1787]
 gi|210152705|gb|EEA83711.1| hypothetical protein CLONEX_00372 [Clostridium nexile DSM 1787]
          Length = 588

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 240/580 (41%), Gaps = 101/580 (17%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA  +V  +K    ++ V     GFIN+ L   ++   L  +     + G     K 
Sbjct: 55  PIMIANDVVEVLKESVCIEQVEAVNPGFINIILDGEFVASYLGKMSEQE-KLGVEEPTKQ 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++  AN   P+HVGH R AV+G+++  +  + G+++  + ++ D G Q+  +   
Sbjct: 114 KTIIVDYGGANVAKPLHVGHLRSAVIGESVKRIGKYVGHKMIGDVHLGDWGYQMGLVITE 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPG------VYLKHVGKELADKYSSELLNFPEEKWLPIV- 233
           +  R  +  Y +D    EG YP         L+ +    A  Y+ E  ++ EE       
Sbjct: 174 LKKRKPELPYFDDQ--FEGEYPEESPFTITELEEI-YPTASAYAKEHEDYKEEALQATFL 230

Query: 234 -----KDYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSP-IRDIIDNLA 281
                + Y+   + +M +   DLK    ALN++ D++  E      D  P I ++++ + 
Sbjct: 231 LQNGHRGYTAIWKHIMNVSVADLKKNYGALNVEFDLWKGE-----ADAQPYIPEMVEYMK 285

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
           ++GY +                +D+  L+       D  + P   +LKSDG+  Y   DL
Sbjct: 286 KEGYAH----------------IDQGALVVDVKEENDTKEIPPCMILKSDGAALYDTTDL 329

Query: 339 AYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL----- 391
           A    + E+ +  D +IY+         + L  V      KK +I     EL  +     
Sbjct: 330 ATL-IEREKLYHPDEVIYLADKR-----QELHFVQVFRCAKKTKIINENMELKFIGFGTM 383

Query: 392 -YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDF 439
             +DG P K   R G  + L  +++++  +  + +   R  SE           L    +
Sbjct: 384 NGKDGKPFKT--RDGGVMRLESLINDINEEMYKKIAENRTMSEEEARKTAQMVALSAMKY 441

Query: 440 CKVKEQSKENPVFYVQ--------------YAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
             +  Q+ ++ VF V+              Y   R +SI  +  +   D       +   
Sbjct: 442 GDLSNQAAKDYVFDVERFISFEGNTGPYNLYTIVRIKSILAKYAESGKDAAKCKMKK--- 498

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           PQ      SE  L++ +A++  VIE A     P+K+  Y+YDL++ F+  +       ++
Sbjct: 499 PQTQ----SEKALMLEVAKFNNVIETAFEELAPHKICAYIYDLSNAFNRFYHE----TKI 550

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  +RK   + L L+   A  + + ++++G E+P  M
Sbjct: 551 LSEENEDRKAGFIALLLITKRA--LEACIDMLGFEAPERM 588


>gi|315174024|gb|EFU18041.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIASELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|321476501|gb|EFX87462.1| hypothetical protein DAPPUDRAFT_235532 [Daphnia pulex]
          Length = 499

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 210/505 (41%), Gaps = 90/505 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +EF S N   P HVGH R  + G+ L++L    G+ V R  Y+ D G Q   L   +
Sbjct: 44  QIIVEFSSPNIAKPFHVGHLRSTIHGNFLSNLFTALGHNVKRLNYLGDWGTQFGLLQFGL 103

Query: 182 FWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSS------ELLNFPEEKWLPIV 233
                Q  ++ D  S  P      +Y+K     LA+K  S       L    E     I 
Sbjct: 104 ----DQGWFSWDEISKNPIRSLLEIYVK--ANALAEKDESVSVAARSLFQRLESGDQEIS 157

Query: 234 KDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K+++   Q  +  +R     L ++ D F  E  +   + + +  I++          G L
Sbjct: 158 KNWAEIRQHTVTELRQTYARLGVKFDEFNWESQYGIKESAKVLSILEK--------SGHL 209

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
                + T+   ++ K+++             L+KSDGS  Y   D+A    ++ +  F 
Sbjct: 210 VTRAGEGTKVIRLNEKKMV------------TLVKSDGSSLYLTRDVAAAIDRWGKFPFR 257

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK-MSKRAGDFIT 409
            M+YV+ +  S +   L+++ + +    A  N+   E V+  R    IK MS R G  + 
Sbjct: 258 RMLYVVDNAQSDHFVALKSILSLMDHAWAS-NI---EHVKFGR----IKGMSTRKGTIVF 309

Query: 410 LRHVVDE---------VGSDSVRFMMLWRKNSELLDF---------DFCKVKE------- 444
           L  ++DE         + S + R  +   +N ++ D          D  + ++       
Sbjct: 310 LSDLLDEAHARMKAKQITSQNTRVNV--EENPQITDILAVSAVIINDLKQRRQRDYVFNW 367

Query: 445 ----QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
               Q K +    +QY ++R  S+ +      PD D D    ++I QE E     + L+ 
Sbjct: 368 DDALQDKGDTGIRLQYTHSRLHSLEKMCGVRLPD-DLDSLDTSLI-QEQEL----IDLMR 421

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  + +V++++    EP  L  YL+DL+   H      +  P    V++   +L  +RL
Sbjct: 422 DLGRFHQVLQDSYTHLEPCTLVRYLFDLS---HSLGVALKTIP----VKSQETELAQVRL 474

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            +  A   +++ GL I+GV+   EM
Sbjct: 475 AIFSASKRVLSIGLKILGVQPLEEM 499


>gi|257084503|ref|ZP_05578864.1| arginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256992533|gb|EEU79835.1| arginyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATKRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKKAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|255975129|ref|ZP_05425715.1| arginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256616973|ref|ZP_05473819.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256763163|ref|ZP_05503743.1| arginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256853827|ref|ZP_05559192.1| arginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307276760|ref|ZP_07557872.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307285744|ref|ZP_07565878.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307290479|ref|ZP_07570392.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|255968001|gb|EET98623.1| arginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596500|gb|EEU15676.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684414|gb|EEU24109.1| arginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256710770|gb|EEU25813.1| arginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|295113508|emb|CBL32145.1| arginyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306498426|gb|EFM67930.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306502505|gb|EFM71772.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506537|gb|EFM75695.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315030154|gb|EFT42086.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315161616|gb|EFU05633.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0645]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++ ++V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|229545112|ref|ZP_04433837.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229309777|gb|EEN75764.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1322]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|29376964|ref|NP_816118.1| arginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554005|ref|ZP_03984052.1| arginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256963634|ref|ZP_05567805.1| arginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307271575|ref|ZP_07552847.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|38372516|sp|Q831N1|SYR_ENTFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29344429|gb|AAO82188.1| arginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176829|gb|EEI57801.1| arginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256954130|gb|EEU70762.1| arginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306511847|gb|EFM80845.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|315574745|gb|EFU86936.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315580914|gb|EFU93105.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327535755|gb|AEA94589.1| arginine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|257090658|ref|ZP_05585019.1| arginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312905196|ref|ZP_07764317.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256999470|gb|EEU85990.1| arginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310631586|gb|EFQ14869.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315579134|gb|EFU91325.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|254417711|ref|ZP_05031435.1| arginyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196183888|gb|EDX78864.1| arginyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 600

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 135/586 (23%), Positives = 228/586 (38%), Gaps = 99/586 (16%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I  R+  DP   SV +AG GFINL L+ + L +  + +       G  ++  
Sbjct: 54  NPRELAGRIAERLSSDPRFASVEVAGPGFINLKLADALLAERAAEVAADAEHAGSAVVAD 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV I++   N   PMHVGH R A++G++L  L  F G  VT + +  D G Q+  L +
Sbjct: 114 PRKVVIDYGGPNVAKPMHVGHLRSAIIGESLKRLFRFRGDHVTGDAHFGDWGFQMGLLIV 173

Query: 180 SVFWRYQQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           +            D  L EG+     G +       LAD      L   + K  P  +D 
Sbjct: 174 AC----------GDEGLAEGFLAEGDGPFPADSPVTLADLDRLYPLAAGKAKEDPAFRDR 223

Query: 237 SVQAMMK-----------------IIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRD 275
           + +A  +                 + R+ LK     L++  D++  E D    DP  + +
Sbjct: 224 ARKATAELQNGRPGYRALWTHFVAVSREALKREYGDLSVDFDLWNGESD---ADPL-MPE 279

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTY 333
           ++ +L   G + E      +     K    RK+ L   +++      PLL   S+GS  Y
Sbjct: 280 MLAHLKATGLLVED--DGAQVVHVAKPGETRKKKLADGSVIEAPSPPPLLVISSEGSAMY 337

Query: 334 FAADLAY-FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              DLA     K     D  +YV+    ++H   V R   +A   +E   +    L    
Sbjct: 338 GTTDLATILDRKKALAPDLALYVVDERQAEHFEQVFRAAYLAGYAAEGSLE---HLGFGT 394

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGSD---------------- 420
              +DG P K   RAG  + LR ++D+             +G D                
Sbjct: 395 MNGQDGKPFKT--RAGGVLKLRDLIDQATDKARERLHEAKLGDDLSPEEFEAIAHKVAIA 452

Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +++F  L    +    FD  +    + K  P  Y+ Y   R +S+ R+A +         
Sbjct: 453 ALKFADLSNARTTSYVFDLDRFMSFEGKTGP--YLLYQSVRIKSLLRKAAEQ------GA 504

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P  ++  E     +E  L + L  +   + +A   + P+ +A + Y +A  F   ++  
Sbjct: 505 TPGAIVIAEQ----AERDLALTLDAFSTAVSDAYDKRMPHLVAEHAYRVAQSFSKFYAA- 559

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A +      RL L  A    + + L ++G+E+P  M
Sbjct: 560 -----CPVLVAPDEATRASRLALSAAALRQLETALTLLGIETPERM 600


>gi|257079701|ref|ZP_05574062.1| arginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257087497|ref|ZP_05581858.1| arginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257419922|ref|ZP_05596916.1| arginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294780860|ref|ZP_06746215.1| arginine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270768|ref|ZP_07552058.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|312899897|ref|ZP_07759215.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|256987731|gb|EEU75033.1| arginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256995527|gb|EEU82829.1| arginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257161750|gb|EEU91710.1| arginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294452105|gb|EFG20552.1| arginine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306512882|gb|EFM81524.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|311292893|gb|EFQ71449.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025346|gb|EFT37278.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315148497|gb|EFT92513.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315150094|gb|EFT94110.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315166333|gb|EFU10350.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|323481459|gb|ADX80898.1| arginyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|256961238|ref|ZP_05565409.1| arginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257416704|ref|ZP_05593698.1| arginyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|293383522|ref|ZP_06629432.1| arginine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387365|ref|ZP_06631921.1| arginine--tRNA ligase [Enterococcus faecalis S613]
 gi|307287653|ref|ZP_07567696.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312906072|ref|ZP_07765084.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909418|ref|ZP_07768273.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256951734|gb|EEU68366.1| arginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257158532|gb|EEU88492.1| arginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|291079034|gb|EFE16398.1| arginine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083263|gb|EFE20226.1| arginine--tRNA ligase [Enterococcus faecalis S613]
 gi|306501391|gb|EFM70694.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|310627718|gb|EFQ11001.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290091|gb|EFQ68647.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|315032650|gb|EFT44582.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315164876|gb|EFU08893.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 563

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++ ++V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|315170234|gb|EFU14251.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 563

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++   + P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRIAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|229549355|ref|ZP_04438080.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972063|ref|ZP_05422649.1| arginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256956746|ref|ZP_05560917.1| arginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860154|ref|ZP_07106241.1| arginine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|312953554|ref|ZP_07772391.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305592|gb|EEN71588.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963081|gb|EET95557.1| arginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256947242|gb|EEU63874.1| arginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849193|gb|EFK76943.1| arginine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|310628392|gb|EFQ11675.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315035945|gb|EFT47877.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315151966|gb|EFT95982.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159299|gb|EFU03316.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 563

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F+ ++
Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H      +R +  + +K    RL LV+AVA+++   L ++G+ +P EM
Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +     + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKFD-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++ ++V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172


>gi|258615933|ref|ZP_05713703.1| arginyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 472

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 203/475 (42%), Gaps = 76/475 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+   HG ++   A  L++     P  IA  +  +I    + + + + G  ++N +
Sbjct: 27  LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   + +K+L ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++ 
Sbjct: 84  MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +M   GY+  R  ++ D G Q   L ++   W  ++A+       P      +Y++   
Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267
            E+A+  +   LN     W   +++   +A  + +  RD+ +K  N  +D+     D   
Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + +I+  L  +  + E        K  +  D+    L             P 
Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296

Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370
           L  KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV         
Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354

Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                            +S +K +I VLL E++         ++S++  D      V  +
Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413

Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQA 468
           VG  +V F  L  KN  L  FDF     V+ + +  P  YVQY +AR  S+  +A
Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA 464


>gi|87300835|ref|ZP_01083677.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284706|gb|EAQ76658.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 610

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 218/563 (38%), Gaps = 116/563 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYL 98
           G    N A+ L+R L   P  IA  IV ++ +D       +   IAG GFINL L P  L
Sbjct: 47  GDFQANGALSLARRLKQAPRAIAGAIVEQLAVDTAFTELCEPAQIAGPGFINLTLRPRQL 106

Query: 99  RKILSSIVVSGIEYGRNLIG-----------KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
              L S        G   +G               V ++F S N    MHVGH R  ++G
Sbjct: 107 AAELRS------RLGDQRLGVPEVSGAATGAAAAPVIVDFSSPNIAKEMHVGHLRSTIIG 160

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPE--GYYPGV 204
           D LA ++ F G+ V R  ++ D G Q   L   +     +AL   D+ DL +   +Y   
Sbjct: 161 DALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVAFYRQA 220

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
             +    E     S E +    +   P+ +  + Q + +  R + + +  + DI +SE  
Sbjct: 221 KARFDADEAFQATSREEV-VKLQSGDPVSR-RAWQLLCEQSRREFQQIYDRLDIRLSE-- 276

Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             RG+   +P +  ++ +L   G +         +    +C       +F   + G D  
Sbjct: 277 --RGESFYNPYLEQVVADLEASGLLV--------TDAGAQC-------VFLEGVSGKDGQ 319

Query: 322 R-PLL--KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA-- 371
             PL+  KSDG + Y   DLA  + ++       G   +IYV  +  + +   +  VA  
Sbjct: 320 PLPLIVRKSDGGFNYATTDLAALRYRFAAPPEGDGARRLIYVTDAGQASHFAAVFQVARR 379

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------- 411
           A    +  ++  +   LV+   DG   K+  R+GD + L+                    
Sbjct: 380 AGWVPEGGRLEHVPFGLVQ-GDDGK--KLKTRSGDTVRLKDLLEEAVERAEADLRRRLAE 436

Query: 412 -----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                      HV   VG  +V++  L    +    F F ++   S  N   Y+ YA  R
Sbjct: 437 EERQEEEEFITHVATTVGLAAVKYADLSTNRNTNYQFSFDRMLALSG-NTAPYLLYALVR 495

Query: 461 CRSIFRQ---------AKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
              I R+         A  +FPD L F        PQE       L L   +AE    +E
Sbjct: 496 IAGIARKGGVGAGEGDAAGVFPDPLVFS------EPQEWALARQLLALDTVIAE----VE 545

Query: 511 NATIAQEPYKLAFYLYDLASVFH 533
              +   P +L  YL++L+ VF+
Sbjct: 546 EELL---PNRLCSYLFELSQVFN 565


>gi|158321760|ref|YP_001514267.1| arginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|254782938|sp|A8MKD9|SYR_ALKOO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158141959|gb|ABW20271.1| arginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 587

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 130/612 (21%), Positives = 245/612 (40%), Gaps = 113/612 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V +RP  C       N A+  ++     P+ IA  ++  +K     + + IAG GFIN+ 
Sbjct: 30  VSDRPDLC---QFQCNGALPAAKEYKKAPIQIANDLLPALKNVEIFEEITIAGPGFININ 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIG-----KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +  S+L   ++ +      YG   +G     +   + I++  AN   P+HVGH R A++G
Sbjct: 87  VKDSFLAAYVNEM------YGSEKLGLEEPAEPQTIIIDYGGANVAKPLHVGHLRAAIIG 140

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203
           ++L  +  F G++V  + ++ D G Q+  +   +  R     Y ++S   EG YP     
Sbjct: 141 ESLKRISRFVGHKVIGDVHLGDWGLQMGMVISELRRRSPHLPYFDES--YEGEYPAEAPF 198

Query: 204 -------VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKA--- 251
                  +Y        +D  + E       +     + Y    Q ++ +   DLK    
Sbjct: 199 TIDELEDIYPAASKLAKSDAAAMEEAQQATAELQKGRRGYMALWQHILNVSVADLKKGYG 258

Query: 252 -LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQ 308
            LN+  D++  E D  +     I  ++D L +  Y    +G+L    +K T         
Sbjct: 259 NLNVDFDLWNGESDCQK----YIDVMVDYLKKNNYTSFSDGLLIVDVAKETD-------- 306

Query: 309 LLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGSDHSG 362
                    + V  P  +LK+DGS  Y   DLA     +ER      D +IYV+      
Sbjct: 307 ---------NHVIPPFIVLKTDGSSLYSTTDLATI---WERVQDYDPDQIIYVVDKRQEL 354

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHV-------- 413
           + +++   A         + +       +  +DG P K   R G  + L+ +        
Sbjct: 355 HFEQVFRCAKKTKIAGEDLTLKFLGFGTMNGKDGKPFKT--REGGVMRLQDLIQIIKDAV 412

Query: 414 --------------VDE----VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454
                         VDE    VG  ++++  L  + ++   FD  +    +    P  Y+
Sbjct: 413 YNKLQENEAIDPSEVDEISRKVGLAALKYGDLSNQITKDYVFDIDRFASFEGNTGP--YI 470

Query: 455 QYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
            Y   R +SI R+ A + F   D    P + +         E  L++ L+ +   +E + 
Sbjct: 471 LYTIVRIKSILRRIAAEGFQASDKIGVPHSDV---------ERSLLLKLSRFNETVEFSF 521

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           +   P ++  Y+YDLA+ F+  +   +      F + ++       + L+    +++ + 
Sbjct: 522 VNHSPNRICDYIYDLANTFNKFYHDTKIISETEFEKKSS------WINLITLTMNVLETC 575

Query: 574 LNIIGVESPNEM 585
           L ++G+E+P +M
Sbjct: 576 LELLGIEAPEKM 587


>gi|308158755|gb|EFO61320.1| Arginyl-tRNA synthetase [Giardia lamblia P15]
          Length = 621

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 122/548 (22%), Positives = 213/548 (38%), Gaps = 71/548 (12%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRK----ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
           +++V IAG  FIN+ L+P YL      I  ++    +     L GK   V ++F S N  
Sbjct: 105 IEAVNIAG-SFINIVLTPEYLLSKCFDIYMAVPFGALPKPPTLPGKC--VAVDFSSPNVA 161

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
             MHVGH R  ++GD++  L  +  Y+V R  ++ D G Q   L            Y  D
Sbjct: 162 KSMHVGHLRSTIIGDSICRLYEYVKYKVHRINHVGDWGTQFGML----------ITYLTD 211

Query: 194 SDLPEGYYPGVYLKHVG----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
              PE      + K +       L   Y      F  +   P  +  + +A++K+ R +L
Sbjct: 212 MH-PEIADAAAHCKRITMLPIDNLVAFYKKAKERFDSD---PDFQKRAYEAVVKLQRLNL 267

Query: 250 KALNIQHDIF-ISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               + + I  IS  +F R  D   I+  ID      Y ++      + K      M  K
Sbjct: 268 AEFYLWYKICDISRHEFQRIYDRLDIK--IDEFGESSYKFKLGTTVARLKRLHLTQMSDK 325

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVK 365
             +    + G D    ++KSDG +TY   D+A  Y + +     D  +YV+ +  S +  
Sbjct: 326 ATVI--PIEGMDYPLIIVKSDGGFTYDTTDMAAIYHRTQVLHA-DKCVYVVDAGQSSHFD 382

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
            +   A           V +   V L  DG  +K   RAG+ + L  ++DE  ++S+R +
Sbjct: 383 LVFKAAEKAGWITKNQAVHVPFGVVLGNDGKRLKT--RAGETVKLEDLLDEAVTESMRLL 440

Query: 426 MLWRKNSELLDFDFCKVKEQS----------------------------KENPVFYVQYA 457
               ++ E    +  +V E                              K N   Y+ Y+
Sbjct: 441 EERNRDQEFSQEEMRRVAEAVGYGAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLYS 500

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           + R  SI R+A         +L+  + +   S  D SE+ L+V L +    I        
Sbjct: 501 FTRISSICRKAGVNRE----ELYTSDTLKNLSITDPSEINLLVALLKVHDTILFTLEDLC 556

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+++  ++Y +AS +   +   R    +   ++ +      RL L       +    +++
Sbjct: 557 PHRICDWVYSVASAYTDFYEKCR---VIETSESGDSICNKSRLALCEMTRQSLRLAFHLL 613

Query: 578 GVESPNEM 585
           G+   + M
Sbjct: 614 GIREIDRM 621


>gi|195392491|ref|XP_002054891.1| GJ22551 [Drosophila virilis]
 gi|194152977|gb|EDW68411.1| GJ22551 [Drosophila virilis]
          Length = 571

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 112/497 (22%), Positives = 196/497 (39%), Gaps = 74/497 (14%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V 
Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQA 240
               Q    +D+ +       +Y  +V    A     +L     E +  L   KD ++  
Sbjct: 174 ----QLSNVHDAQMRAAPIETLYNAYVTANKAAAADPQLAQQARELFSALEAGKDTTMSK 229

Query: 241 MMKIIR----DDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +  R    ++L      L +  D +  E  + +      RDI+D L +      G+L 
Sbjct: 230 QWEQYRQYTIEELTGVYERLGVHFDSYEWESQYSQ------RDIVDVLTQ--LRTAGLLQ 281

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
             +                R  +V D    P++KSDGS  Y A D+A    + +R  F  
Sbjct: 282 REEDG--------------REIVVVDQRRVPVIKSDGSTLYLARDIAALLERQQRLRFSR 327

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEK-----------------KAQINVL-----LCELV 389
           M+YV+ +  + + K L    +A+ ++                   Q N +     L E  
Sbjct: 328 MLYVVDNGQADHFKALFQTVSALDDRFNDKLQHVKFGRIHGMSTRQGNAIFLRDVLNEAR 387

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            + R+   I  + +  + +   HV D +G  +V   +L ++     +F + +  + + + 
Sbjct: 388 DVMREKRSISTTTKVNNTLDDDHVCDILGVSAVLVNVLKQRRQRDYEFSWQQALQVNGDT 447

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
            +  +QY + R  ++     D F  ++  ++ P      E   D   L L+  LA + + 
Sbjct: 448 GI-KLQYTHCRLHNLL----DNFKHIELAEVKPSWQHLTEEPADA--LALLYELARFEQC 500

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A    E   +  YL+ L +      +  R   RL   Q    +    RL L  A   
Sbjct: 501 IWQAKEQLEACVVVNYLFGLCN------ATSRALKRLPVKQEKCPEKQRQRLLLFRAAKR 554

Query: 569 IINSGLNIIGVESPNEM 585
            +  G+ ++G++  N+M
Sbjct: 555 TLQQGMQLLGLKPLNQM 571


>gi|153814087|ref|ZP_01966755.1| hypothetical protein RUMTOR_00296 [Ruminococcus torques ATCC 27756]
 gi|145848483|gb|EDK25401.1| hypothetical protein RUMTOR_00296 [Ruminococcus torques ATCC 27756]
          Length = 585

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 117/617 (18%), Positives = 240/617 (38%), Gaps = 98/617 (15%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           K   +K++    +  RP  C +     N AM  ++     P  IAE +   +K     ++
Sbjct: 15  KAGYDKELAKVTLSNRPDLCEY---QCNGAMAGAKKYKKAPFMIAEDVAVYLKESSYFET 71

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           V +   GFINL L+P  +   L+ +  +   G+E       +   + I++   N   P+H
Sbjct: 72  VEVVKPGFINLKLAPQSVADYLNQMSETEKLGVEEAE----EPKTIMIDYGGPNVAKPLH 127

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           VGH R A++G+++  +  F G +V  + ++ D G Q+  +   +  R  +  Y +++   
Sbjct: 128 VGHLRSAIIGESVKRITRFKGNKVIGDIHLGDWGYQMGLIITELKKRKPELPYFDENFT- 186

Query: 198 EGYYPGVYLKHVGK-----ELADKYSSELLNFPEE------------KWLPIVKDYSVQA 240
            G YP      +G+       A  Y+ E   + +E            +    V ++ +  
Sbjct: 187 -GEYPAEAPFTIGELEEIYPTASSYAKEDEEYRKEALHATYLLQNGHRGYRAVWNHIMNV 245

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  ++ + + LN++ D++  E D  +  P    D++  L  +GY               
Sbjct: 246 SVTDLKKNYERLNVEFDLWKGEADAQKYIP----DMVQMLKEEGY--------------- 286

Query: 301 KCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYV 355
               D   L+       D  + P   +LKSDG+  Y   DLA    + E  +  D +IYV
Sbjct: 287 -ARYDEGALVVDVQEESDKKEVPPCMILKSDGAALYDTTDLATL-VQREEDYQPDEVIYV 344

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVV 414
           +      +  ++   A           +       +  +DG P K   R G  + L +++
Sbjct: 345 VDKRQELHFTQVFRCAKKTGIVSPNTRLEFLGFGTMNGKDGKPFKT--REGGVMRLENLI 402

Query: 415 DEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF----------- 452
            E+  +  + +M  R   E           L    +  +  Q+ ++ +F           
Sbjct: 403 REINDEMYKKIMDNRTVEEEEAKKTARIVGLAAIKYGDLSNQAGKDYIFDVDRFTSFEGN 462

Query: 453 ---YVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
              Y+ Y   R +SI  + K+     +   + P          +  E  L++ + ++  V
Sbjct: 463 TGPYILYTIVRIKSILAKYKENGGSAEKLSIRPSG--------NVYEKALMLQVLKFNDV 514

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            E       P+KL  Y+Y++A+ F+  +         + +   + +     + L+     
Sbjct: 515 FEAVCEETAPHKLCAYIYEIANEFNKFYHE------TKILSEEDEEKRSGYIALLGLTKR 568

Query: 569 IINSGLNIIGVESPNEM 585
           ++ + ++++G E+P  M
Sbjct: 569 VLETCIDLLGFEAPERM 585


>gi|332797060|ref|YP_004458560.1| arginyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694795|gb|AEE94262.1| arginyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 623

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 40/284 (14%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L++SDG+  Y   D+AY   K+ +   D +I V+    S    +L A    +  KK  IN
Sbjct: 358 LMRSDGTTLYTVRDIAYTIYKFRQFNADEVINVIAEQQSVPQMQLRAALYILGWKKFAIN 417

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---------------------SDS 421
           ++      +   GM  KMS R G +I+L  V D+V                      + +
Sbjct: 418 LIHFSYGMVTLQGM--KMSGRLGKYISLDEVYDKVAEVVKAKIEEKKGILENLNEIVNSA 475

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +R+ ++    ++ + FD  +V    +EN   Y+QY YAR  +I  ++ +   +LD     
Sbjct: 476 IRYAIISVSANKPVSFDVKRVA-NFEENSGPYLQYTYARAYNILSKSTE---NLDISKI- 530

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                 E+E    +  L++ +A++P +  N+    +P  L  +L  LA VF+  +     
Sbjct: 531 -----DENELKNEKRTLLLMIAKFPDIFINSVDHLQPEVLTVFLRGLADVFNSWYD---- 581

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + R +Q  +    + RL +V  V +++ +GLN +G+ S   M
Sbjct: 582 --KERVLQEPDESKRITRLFIVKGVETVLRNGLNTLGIASLTRM 623



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FIN  L+    +++L  I  +  E YG     +  ++ +E  SANP  P+H+GH R A++
Sbjct: 74  FINARLNE---KELLKEIFTNFSENYGIIKTERPLRIVVEHTSANPIHPLHIGHLRNAIL 130

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GDTLA ++   G+EV   +Y+ND+G Q+  L
Sbjct: 131 GDTLAKMLKARGHEVNVRFYVNDSGRQVALL 161


>gi|325107026|ref|YP_004268094.1| arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967294|gb|ADY58072.1| Arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 654

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 13/141 (9%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N AM L++ LG  P  +A  IV ++ +        IAG GFINL L    L   L
Sbjct: 38  GDYQANCAMPLAKQLGKKPRDVATEIVEKLDVADLCAPPDIAGPGFINLKLRSDVLASQL 97

Query: 103 SS------IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            +      + V+ +E   N++       ++F S N   PMHVGH R  V+GD L  +++F
Sbjct: 98  EAALNDDRVGVAAVENPENVV-------LDFSSPNVAKPMHVGHLRSTVIGDALYRILSF 150

Query: 157 SGYEVTREYYINDAGAQINTL 177
            G++VT + ++ D G Q   +
Sbjct: 151 LGHKVTSDNHVGDWGTQFGMI 171



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 114/294 (38%), Gaps = 49/294 (16%)

Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K DG+YTY   DLA  + +  E     ++YV+    S + + L   A      K     +
Sbjct: 376 KQDGAYTYATTDLATIQYRATEWEAKKILYVVDKRQSEHFQLLFETAKLWGYNKIDFRHI 435

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               V + +D  P K   R+GD I L  ++DE                            
Sbjct: 436 SFGTV-MGKDNKPYKT--RSGDIIGLGSLLDEAVSRARTVVDSNDDSKPNGPELSEEERQ 492

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  S+++  L         FD+ K+   + +    Y+QYA+AR   IFR+A   
Sbjct: 493 QIAEIVGIGSIKYADLHHNRDSDYVFDWDKMISMTGDTAA-YMQYAFARVCGIFRKAGVT 551

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              +  D    +  P +     +E  L + LA +   + N T+   P  L  YL+D+A+ 
Sbjct: 552 REQMRMD----DECPLQLTH-PAERALGIQLARFEEALTNVTVEYRPNLLTGYLFDVANA 606

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +       +       +  + + R +L    AS I  GL ++G+E+   M
Sbjct: 607 FSSFYD------KCPVSAEPSDAIRISRFKLCDLTASTIQRGLELLGIETSPRM 654


>gi|224537594|ref|ZP_03678133.1| hypothetical protein BACCELL_02474 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520791|gb|EEF89896.1| hypothetical protein BACCELL_02474 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 605

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 141/628 (22%), Positives = 254/628 (40%), Gaps = 122/628 (19%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   +K +    + F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPSIAAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L+ I V   +YG       +  V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNDIHVDK-QYGIVAATDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYYPGVYL 206
           LA+++  +G +V +   +ND G  I  + LA S +   +    +    D   G Y   + 
Sbjct: 145 LANIVMANGNKVVKTNIVNDRGIHICKSMLAWSKYGNGETPESSGKKGDHLVGDYYVAFD 204

Query: 207 KHVG---KELADKYSSE----------------LLNFPEE---KWLPIVKDYSVQAMMKI 244
           KH     KEL  K+ SE                L+N   E   KW     D  V+A+   
Sbjct: 205 KHYKAEVKELMAKFQSEGATEEEAKAKAEAASPLMNEAREMLVKWE--ANDPEVRALWA- 261

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303
                K  N  ++ F  ++ +H+   S      D +  +   Y EG     K K  +  +
Sbjct: 262 -----KMNNWVYEGF--DETYHKMGVS-----FDKIYYESNTYLEG-----KEKVMEGLE 304

Query: 304 MDRKQLLFR-------STMVGDDVDRPL-LKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
              K   ++       + +  + +D  L L++DG+  Y   D+   K ++ +   D MIY
Sbjct: 305 ---KGFFYKKEDGSVWADLTAEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIY 361

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G++ + + + L  +   +  +  +  V     +    +G   KM  R G  +    ++
Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLM 418

Query: 415 DE-----------------------------VGSDSVRFMML---WRKN-----SELLDF 437
           +E                             VG  ++++ +L    RKN      E +DF
Sbjct: 419 EEMISTAKETSNELGKLDGLSQEEADNIARIVGLGALKYFILKVDARKNMTFNPKESIDF 478

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           +          N   ++QY YAR +S+ R+A +        + P   IP   E    E  
Sbjct: 479 N---------GNTGPFIQYTYARIQSVMRKAAEAGI-----VIPAE-IPVGIELSEKEEG 523

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  +A++  V++ A     P  +A Y YDL   ++  +           ++  N  + +
Sbjct: 524 LIQMVADFAAVVKQAGTDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAVKV 577

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L   VA ++   + ++GVE P+ M
Sbjct: 578 FRLALSENVAKVVRISMGLLGVEVPDRM 605


>gi|317499896|ref|ZP_07958132.1| arginine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087881|ref|ZP_08336806.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898613|gb|EFV20648.1| arginine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330409576|gb|EGG89017.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 588

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 117/617 (18%), Positives = 240/617 (38%), Gaps = 98/617 (15%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           K   +K++    +  RP  C +     N AM  ++     P  IAE +   +K     ++
Sbjct: 18  KAGYDKELAKVTLSNRPDLCEY---QCNGAMAGAKKYKKAPFMIAEDVAVYLKESSYFET 74

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           V +   GFINL L+P  +   L+ +  +   G+E       +   + I++   N   P+H
Sbjct: 75  VEVVKPGFINLKLAPQSVADYLNQMSETEKLGVEEAE----EPKTIMIDYGGPNVAKPLH 130

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           VGH R A++G+++  +  F G +V  + ++ D G Q+  +   +  R  +  Y +++   
Sbjct: 131 VGHLRSAIIGESVKRITRFKGNKVIGDIHLGDWGYQMGLIITELKKRKPELPYFDENFT- 189

Query: 198 EGYYPGVYLKHVGK-----ELADKYSSELLNFPEE------------KWLPIVKDYSVQA 240
            G YP      +G+       A  Y+ E   + +E            +    V ++ +  
Sbjct: 190 -GEYPAEAPFTIGELEEIYPTASSYAKEDEEYRKEALHATYLLQNGHRGYRAVWNHIMNV 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  ++ + + LN++ D++  E D  +  P    D++  L  +GY               
Sbjct: 249 SVTDLKKNYERLNVEFDLWKGEADAQKYIP----DMVQMLKEEGY--------------- 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYV 355
               D   L+       D  + P   +LKSDG+  Y   DLA    + E  +  D +IYV
Sbjct: 290 -ARYDEGALVVDVQEESDKKEVPPCMILKSDGAALYDTTDLATL-VQREEDYQPDEVIYV 347

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVV 414
           +      +  ++   A           +       +  +DG P K   R G  + L +++
Sbjct: 348 VDKRQELHFTQVFRCAKKTGIVSPNTRLEFLGFGTMNGKDGKPFKT--REGGVMRLENLI 405

Query: 415 DEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF----------- 452
            E+  +  + +M  R   E           L    +  +  Q+ ++ +F           
Sbjct: 406 REINDEMYKKIMDNRTVEEEEAKKTARIVGLAAIKYGDLSNQAGKDYIFDVDRFTSFEGN 465

Query: 453 ---YVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
              Y+ Y   R +SI  + K+     +   + P          +  E  L++ + ++  V
Sbjct: 466 TGPYILYTIVRIKSILAKYKENGGSAEKLSIRPSG--------NVYEKALMLQVLKFNDV 517

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            E       P+KL  Y+Y++A+ F+  +         + +   + +     + L+     
Sbjct: 518 FEAVCEETAPHKLCAYIYEIANEFNKFYHE------TKILSEEDEEKRSGYIALLGLTKR 571

Query: 569 IINSGLNIIGVESPNEM 585
           ++ + ++++G E+P  M
Sbjct: 572 VLETCIDLLGFEAPERM 588


>gi|300776117|ref|ZP_07085976.1| arginine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505250|gb|EFK36389.1| arginine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 586

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 129/591 (21%), Positives = 233/591 (39%), Gaps = 108/591 (18%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L + L  +P +I   +   +    ++   F   KGF+N+ +          S+     E 
Sbjct: 46  LVKQLKKNPESIGVELGEALTEQTELFESFNVVKGFLNVKVKNQLFVDNFRSVS----EN 101

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
              +  K   V +E+ S N   P+H+GH R  ++G ++A ++  +GY+V +   IND G 
Sbjct: 102 FSTIEKKNATVMVEYSSPNTNKPLHLGHIRNNLLGFSVAQILKEAGYDVIKTQIINDRGI 161

Query: 173 QI--NTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            I  + LA   F   +     N   D   G Y   + K+  KE+A+     +     +K 
Sbjct: 162 HICKSMLAWEKFGNGETPETANTKGDKFVGNYYVEFDKNYKKEIAELVEQGVGEEQAKKE 221

Query: 230 LPIVK------------DYSVQAMM--------KIIRDDLKALNIQHDIFISEDDFHRGD 269
            P++K            D  V+A+         K   +  K L +  D    E + +   
Sbjct: 222 APVMKEAQKMLLDWENGDEKVRALWAEMNSWVYKGFNETYKRLGVDFDQVQYESNTYILG 281

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I++ +D    +G +Y+      K   +  CD+         T  G D  + LL+SDG
Sbjct: 282 KDLIQEGLD----KGVLYQ------KEDGSVWCDL---------TDEGLD-QKLLLRSDG 321

Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCE 387
           +  Y   DL     ++++     +IY +G++   + + L  +   +  E   Q+  L   
Sbjct: 322 TSVYMTQDLGTAVERFKQNDIQKLIYTVGNEQDYHFQVLFKILKKLGYEWADQLYHLSYG 381

Query: 388 LVRL------YRDGMPI--------------KMSKRAGDFITLRHVVDE-----VGSDSV 422
           +V L       R+G  +                ++  G   TL     E     VG  ++
Sbjct: 382 MVELPEGKMKSREGTVVDADDLMQEMYETAKSKAQELGKLETLSEEEKEASYETVGLGAL 441

Query: 423 RFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ++ ML    +K      +E +DF+          N   ++QY YAR +S+  +A  +  +
Sbjct: 442 KYFMLKVDPKKKMLFNPAESIDFN---------GNTGPFIQYTYARIQSLLSKAGALQAE 492

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                        E E + SE +LI+ LA +  V+  +     P  +A Y+YDL   ++ 
Sbjct: 493 -----------TAEIELNQSEKELIMQLANFKTVVAKSAETLSPALVANYVYDLVKTYNS 541

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +   NP L      + K+   RL +    A  I   L ++G+ + N M
Sbjct: 542 FYQN---NPILN---QEDEKIKQFRLNISDITAKTIKKSLELLGIGTVNRM 586


>gi|302802969|ref|XP_002983238.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii]
 gi|300148923|gb|EFJ15580.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii]
          Length = 536

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 126/565 (22%), Positives = 221/565 (39%), Gaps = 95/565 (16%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ I         V++  +AG GFIN+ LS  Y+ K L+ +++ GI+    ++  
Sbjct: 16  NPREIAQSITRNFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHGIDTWAPVLPV 75

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + ++F S N    MHVGH R  ++GD LA+++ +   EV R  ++ D G Q   L  
Sbjct: 76  KRAI-VDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGDWGTQFGMLIE 134

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----D 235
            +F  +    + +  D   G     Y +   +  AD+       F  +    +VK    D
Sbjct: 135 YLFEMFPN--WEDIGDQAIGDLQAFYKESKVRFDADE------EFKAKAQQAVVKLQSGD 186

Query: 236 YSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              +A  KI+    R++ + +  +  + + E      +P  I D I  L  +G + E   
Sbjct: 187 AKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPY-IPDAIQILRDKGILEES-- 243

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGF 349
                        D   ++F   + G  +    +K DG + Y + DLA  +++   E+  
Sbjct: 244 -------------DGATVIF---VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEK-V 286

Query: 350 DNMIYVMG-SDHSGY------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           + +IYV     H  +       KR E +      +   +   L     L  DG   +  +
Sbjct: 287 EWIIYVTDVGQHQHFDMFFKAAKRAEWLPKEGYPRTQHVGFGLV----LGTDGKRFRTRQ 342

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL--DFD------------FCKVKEQSKE 448
             G  + L  ++DE  S S   ++   ++ E    D D            +  +K   + 
Sbjct: 343 GTG-LVRLVDLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRET 401

Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           N  F              Y+ YAYAR RSI R++     +L  +       P E      
Sbjct: 402 NYTFSFEQMLDVRGNTAVYLLYAYARIRSIIRKSGKSIDELKENGAIVLTHPDER----- 456

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L + L ++  V+E+A     P  L  YLY+L+  F   ++           + N   
Sbjct: 457 --ALGLFLIQFSEVVEDAVTRLLPNTLCEYLYNLSENFTRFYTS---------CKVNGSP 505

Query: 555 LTMMRLQLVHAVASIINSGLNIIGV 579
               RL L  A A ++     ++G+
Sbjct: 506 EETSRLLLCEATAIVMKQCFKLLGI 530


>gi|123967742|ref|YP_001008600.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123197852|gb|ABM69493.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 604

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 144/636 (22%), Positives = 246/636 (38%), Gaps = 130/636 (20%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE----LIVARIKIDPDV 78
           K E +IL + +I +      G    N  + LS+    +P  I+     L+    +I    
Sbjct: 26  KGEFEILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPRDISNDFINLLNKNKRISKLC 85

Query: 79  DSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIEYGRNLIGKG--TKVNIEFVSANPT 133
            S+ IAG GFIN+ L    L  +I S+I    +GI   R  +  G   KV ++F S N  
Sbjct: 86  KSLEIAGPGFINIKLKDEVLINEIKSNIQCNRAGIPLIRKDLESGLSNKVIVDFSSPNIA 145

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
             MHVGH R  ++GD+++ +    GYEV R  ++ D G Q   L   +     + LY+ND
Sbjct: 146 KEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQL-----KDLYSND 200

Query: 194 SDLPEGYYPGVYLKHVGK----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                       L+ +GK    +L + Y      F  E      +  S + ++K+   D+
Sbjct: 201 ------------LEEIGKIKISDLVEFYKESKKRFDNESEF---QKRSREEVVKLQSGDI 245

Query: 250 KALN---------------IQHDIFISEDDFHRGDPSP-IRDIIDNLARQGYVYEGILPP 293
           K++                I  ++ I  ++      +P ++ +ID+L  +  + E     
Sbjct: 246 KSIKAWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNPFLKSVIDDLNLEKILVED---- 301

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-- 347
                  KC       +F   M   +  +PL     K DG + Y   DLA  + ++ +  
Sbjct: 302 ----QGAKC-------VFLDGMTNKE-GKPLPLIIQKKDGGFNYATTDLAAIRYRFNKPP 349

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-----AQINVLLCELVRLYRDGMPIKMS 401
            G D    +  +DH G       V     + K      Q++ +   LV+   DG  +K  
Sbjct: 350 NGDDASRIIYVTDH-GQANHFAGVFQVAKKAKWIPENCQVDHVPFGLVQGI-DGKKLKT- 406

Query: 402 KRAGDFITLRHVVDE-------------------------------VGSDSVRFMMLWRK 430
            R G  I L+ +++E                               +G  +V++  L + 
Sbjct: 407 -REGKTIRLKDLLNEAVRRAKEDLLKRLEDEDRYETEEFIANTSRIIGLGAVKYADLSQN 465

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                 F F K+   +  N   Y+ Y   R   I R+   ++   DF         Q   
Sbjct: 466 RITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKRKNNFVYDSKDF---------QYVN 515

Query: 491 FD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           ++  SE +LI  L ++  VI +      P +L  YL++L   F+  +      P L+   
Sbjct: 516 YEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQV---PILK--- 569

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + + + RL L    A  +   L I+G+E+   M
Sbjct: 570 -EEKNIKISRLNLCDLTAKTLKLSLEILGIETLERM 604


>gi|302757685|ref|XP_002962266.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii]
 gi|300170925|gb|EFJ37526.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii]
          Length = 578

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 131/579 (22%), Positives = 231/579 (39%), Gaps = 101/579 (17%)

Query: 48  NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  I SR  G+     +P++IA+ ++  I      +   +AG G+IN+ LS  ++ + L
Sbjct: 48  NAMGIWSRIKGMQSTYGNPVSIAQDVLRNIPRTSLFEKTSVAGAGYINVTLSARFIAERL 107

Query: 103 SSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           ++++  G++     L  K   V+  F S N    +HVGH R  V+GD++A ++ F    V
Sbjct: 108 TTVLHQGVDALAPELPVKHALVD--FSSPNIAKELHVGHLRSTVIGDSVARMLEFCNVSV 165

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            R  ++ D G Q   L   +F     A      DL + Y           E ++++ S+ 
Sbjct: 166 MRRNHVGDWGTQFGMLLEHIF--ETGAEVEGIGDLQKMYV----------EASERFKSD- 212

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NL 280
                       K  + Q ++K+ R + +     H  + S  D  R         ++ +L
Sbjct: 213 ---------EQFKAKAQQGVVKLQRSEAE----YHAKWKSLCDVSRRAYERTYGRLNVSL 259

Query: 281 ARQG-YVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
             +G   Y   +P       +K    + D  +++F   + G D+   + K+DG+ TY   
Sbjct: 260 EEKGESFYHPYIPYAIKALEEKGLLQESDGARVIF---LEGYDIPLIVTKTDGAITYATT 316

Query: 337 DLA--YFKCKYERGFDNMIYVM---------------------------GSDHSGYVKRL 367
           DLA  +++   E+  + +IYV                             + H G+   L
Sbjct: 317 DLAALWYRVHVEKA-EWIIYVTDVGQKQHFDMFFQAAKLAGWLPEHGFPKAQHIGFGMVL 375

Query: 368 EAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFIT--LRHVVDEVGSDSVR 423
                 +  +K    VLL  L+     R    +    R G++    L    + +G  +V+
Sbjct: 376 GEDGKRIRGRKG--GVLLANLLDDAKSRSHKELIERGRKGEWSGQDLEAAAEALGYGAVK 433

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         FDF ++ +  K N   Y+ YAYAR  SI R++     +         
Sbjct: 434 YADLKNNRETNYRFDFDQMLD-IKGNTAVYLFYAYARVCSIIRKSGRSIDE--------- 483

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            I Q  E       E  L +HL ++   +E++     P  L  YLY L+ +F   ++  +
Sbjct: 484 -IKQICELVVEHPHERSLGLHLIQFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCK 542

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            N  L+            RL L  A   I+  GL ++G+
Sbjct: 543 VNGSLQ---------EASRLLLCEAARLIMKQGLELLGL 572


>gi|195110603|ref|XP_001999869.1| GI24765 [Drosophila mojavensis]
 gi|193916463|gb|EDW15330.1| GI24765 [Drosophila mojavensis]
          Length = 571

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 194/501 (38%), Gaps = 82/501 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V 
Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQA 240
               Q    +D  + E     +Y  +V    A     +L     E +  L    D ++  
Sbjct: 174 ----QLGSISDDRIREAPIETLYNAYVMANKAAAEDPQLAQRARELFTSLEANTDPTLSC 229

Query: 241 MMKIIR----DDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +  R    D+L      L +  D +  E  + + D   I D++  L   G +      
Sbjct: 230 EWQKYRQYTIDELTGMYDRLGVHFDSYEWESQYSQRD---IGDVLTQLRSAGLL------ 280

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
                        +++   R  +V D+   P++KSDGS  Y A D+A    +  R  F  
Sbjct: 281 -------------QREHDGREIVVVDERRVPVIKSDGSTLYLARDIAALLERQRRLQFTR 327

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           M+YV+ +  + +   L + A A       ++  L + ++  + G    MS R G  + LR
Sbjct: 328 MLYVVDNGQADHFNALFSTATA-------LDASLKDKLQHVKFGRIRGMSTRQGKAVFLR 380

Query: 412 HVVDEVGS--DSVRFMMLWRK-NSELLDFDFCKV-----------KEQSKENPVFYVQYA 457
            V++E        RF     K NS L D   C +           K++ + +  F  Q A
Sbjct: 381 DVLNEARDVMREKRFASATTKANSTLNDEHVCDILGVSAVLVNVLKQRRQRDHEFSWQQA 440

Query: 458 ------------YARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAE 504
                       Y  CR       + F D++  ++ P       +E  +  L ++  LA 
Sbjct: 441 LQVNGDTGIKLQYTHCR--LHNLLERFGDIELAEIKPS--WQHLTEEPSDALAVLYELAR 496

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           + + +  A    E + L  YL+ L +      +  R   RL   Q         RL L  
Sbjct: 497 FDQCVWQAKEQLEAHVLVNYLFGLCN------ATSRALKRLPVKQEKCPDKQSQRLLLFR 550

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    +  G+ ++G++  N+M
Sbjct: 551 AAKRTLQQGMRLLGLKPLNQM 571


>gi|194476818|ref|YP_002048997.1| arginyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191825|gb|ACB42787.1| arginyl-tRNA synthetase [Paulinella chromatophora]
          Length = 602

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 74/159 (46%), Gaps = 9/159 (5%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSP--- 95
           G    N  + LS+ LG  P  IA  +V  +   P    +     IAG GFINL L P   
Sbjct: 47  GDFQVNGPLALSKILGKPPRKIATDLVNALLAIPSFSELCSPPIIAGPGFINLVLKPELL 106

Query: 96  -SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S +RK+LS+  + G+            V I+F S N    MHVGH R  ++GD LA ++
Sbjct: 107 KSEIRKVLSNPNI-GVPNVTETEDHLFPVIIDFSSPNIAKDMHVGHLRSTLIGDCLARIL 165

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
            F GY V R  ++ D G Q   L   +     QAL N D
Sbjct: 166 EFRGYNVLRLNHVGDWGTQFGMLITHLKQVAPQALINPD 204



 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 116/298 (38%), Gaps = 58/298 (19%)

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKK 378
           KSDG + Y   DLA  + ++   F+      ++YV  S  + +   +  +A  A      
Sbjct: 325 KSDGGFNYATTDLAAIRYRFGVIFEGDGASRIVYVTDSGQANHFAGIFQIARRAGWVPTN 384

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            ++  +   LV+  +DG   K+  RAGD + L+ ++DE                      
Sbjct: 385 GRLEHVPFGLVQ-GQDGK--KLKTRAGDTVRLKDLLDEAIERADIDLRKRLAEENRSEEE 441

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  +V++  L +       F+F ++   +  N   Y+ YA  R   I R+
Sbjct: 442 IFIKDVSKKVGIAAVKYADLSQNRITSYQFNFDRMLSLNG-NTAPYLLYAMVRIAGILRK 500

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           +      L+  L     I         E  L+ H+  +  +I        P +L  YL++
Sbjct: 501 SSKQHDTLEKQLHFSEPI---------EWALVRHILRFDLIIIEVEEELLPSRLCSYLFE 551

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L+ +F+  +    + P L+  + N       RL L    A  +  GLN++G+ +   M
Sbjct: 552 LSQLFNRFYD---QVPVLKAKEPN----LSSRLILCQLTADTLKMGLNLLGIPTLERM 602


>gi|295687776|ref|YP_003591469.1| arginyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429679|gb|ADG08851.1| arginyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 600

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 135/608 (22%), Positives = 229/608 (37%), Gaps = 119/608 (19%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N A+  ++    +P  IA  +V  +K DP + SV IAG GFINL +S   L  + +  + 
Sbjct: 42  NGALAAAKSAKRNPREIATQVVEILKADPRLSSVEIAGAGFINLRVSDEAL-SVRAREIA 100

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +    G  ++    +V I++   N   PMHVGH R +++G+++  L  F G EV  + + 
Sbjct: 101 ADARTGAQVLDAPRRVLIDYAGPNVAKPMHVGHLRASIIGESIKRLYRFRGDEVLGDAHF 160

Query: 168 NDAGAQINTLALSVFWRYQ--QALYNNDSDLPEG------------------------YY 201
            D G Q+  L  ++       +AL     D   G                         Y
Sbjct: 161 GDWGFQMGLLISAILDEDAAIRALVEKLPDTAAGADPADEAALNAELDTRIALADLDRIY 220

Query: 202 PGVYLKH----VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           P   L+       KE A K ++EL N        ++  + V+     +  +  AL +  D
Sbjct: 221 PAASLRQKEDAAFKERARKATAELQN--GRYGYRVLWSHFVKVSRVALEREFHALGVDFD 278

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           ++  E D +      I  ++  L  +G + E                D+   + R     
Sbjct: 279 LWKGESDVN----DLIEPMVGQLEAKGLLVE----------------DQGARIVRVARED 318

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEA 369
           D  D P   ++ S+GS  Y   DLA       + FD  + +   D     H   V R   
Sbjct: 319 DKQDVPPLLVVSSEGSAMYGTTDLATI-LDRRQSFDPHLILYCVDQRQALHFETVFRAAY 377

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------- 415
           +A    E   + ++    +     DG P K   RAG  + L  +++              
Sbjct: 378 LAGYADEGSLE-HIGFGTMNGT--DGKPFKT--RAGGVLKLHDLIEMAREKARERLREAG 432

Query: 416 ---------------EVGSDSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQYA 457
                          +VG  +++F  L  +R  S + D D F     + K  P  Y+ Y 
Sbjct: 433 LGAELSEEQFEDTAHKVGVAALKFADLQNFRGTSYVFDLDRFTSF--EGKTGP--YLLYQ 488

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R +S+ R+A +             VI +++E D + L     L  +   ++ A   + 
Sbjct: 489 SVRIKSVLRKAAEAGA-----TAGEIVIGEQAERDLAML-----LDAFEGALQEAYDKKA 538

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A + Y LA  F   ++          + A+   L   RL L       +   L+++
Sbjct: 539 PNFVAEHAYRLAQSFSKFYAA------CPIMSADTDALRASRLALAETTLRQLELALDLL 592

Query: 578 GVESPNEM 585
           GVE+P  M
Sbjct: 593 GVEAPERM 600


>gi|301115894|ref|XP_002905676.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262110465|gb|EEY68517.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 480

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 212/516 (41%), Gaps = 106/516 (20%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +HVGH R +V+GDT+ +L+ F G+ V+R  +  D G+ + TL + +  +        D+ 
Sbjct: 5   LHVGHLRSSVLGDTICNLLEFRGHRVSRISHTGDVGSALATLIVELLEQNVALETLTDAQ 64

Query: 196 LPEGYYPG---VYLKHVGKELADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDLKA 251
           L + Y  G   + +  V K   D    +L        + P V+D   +A           
Sbjct: 65  LGKYYESGKRRLEMDTVFKHKVDDVVLQLQRLGTNGEVDPKVRDAWTRACQ--------- 115

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                   +S + + R     I D +  N+  +G   E    P  S   QK   D  Q +
Sbjct: 116 --------VSREAYQR-----IFDRLGVNVIERG---ESTYMPLVSPVVQKM-QDSGQAV 158

Query: 311 FRSTMVG---DDVDRP---LLKSDGSYTYFAADLAYFKCKYER--GF--------DNMIY 354
                +G   D  D+P   + KSDG + Y   DLA   C + R  GF        D ++Y
Sbjct: 159 ESRGALGVFLDGPDKPPMLIRKSDGGFLYATVDLA---CLHSRIHGFPGVDSTQYDEIVY 215

Query: 355 VMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCEL---VRLYRDGMPIKMSKRAGDFIT 409
           V       + K L A A  A  ++++ + +V L      + L  DG   K+S R G F  
Sbjct: 216 VTDQSQQLHFKHLFAAAQQAGWTQRQNKEDVKLTHAPFGLVLGHDG--TKLSSRNGAFDY 273

Query: 410 LRHVVDEVGSDSVRFMML----------WRKNSELLD-------------FDFCKVKEQS 446
           L  ++D   ++  R  +            +   E +D             F+  + +E++
Sbjct: 274 LEDLLDGAAAECSRQALASATTGVVASELKLTQEQVDAQNRVVGDAAVRYFELAQQRERN 333

Query: 447 -----------KENPVFYVQYAYARCRSIFRQAK----DIFPDLDFD-LFPRNVIPQES- 489
                      K N   Y+ YA AR + I R+A     D F  L  D L  ++V+   S 
Sbjct: 334 YKFIMSNVLNLKGNTGVYLMYASARLQGILRKAGGSSWDAFLGLSSDSLAAQDVLAHASI 393

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           ++  SE  L + L+++   +        P+ L  YL+ +A  FHG +    EN R+  +Q
Sbjct: 394 DWHPSERALALLLSQFDDEVAATLAHLYPHYLCDYLFRVAGHFHGFY----ENCRV--LQ 447

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++     RL L  A  +++  GL ++GVE+ + M
Sbjct: 448 DPHQD---SRLLLCAATDAVLRRGLQLVGVEAVDRM 480


>gi|302755802|ref|XP_002961325.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii]
 gi|300172264|gb|EFJ38864.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii]
          Length = 595

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 126/565 (22%), Positives = 221/565 (39%), Gaps = 95/565 (16%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ I         V++  +AG GFIN+ LS  Y+ K L+ +++ GI+    ++  
Sbjct: 75  NPREIAQSITRNFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHGIDTWAPVLPV 134

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + ++F S N    MHVGH R  ++GD LA+++ +   EV R  ++ D G Q   L  
Sbjct: 135 KRAI-VDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGDWGTQFGMLIE 193

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----D 235
            +F  +    + +  D   G     Y +   +  AD+       F  +    +VK    D
Sbjct: 194 YLFEMFPN--WEDIGDQAIGDLQAFYKESKVRFDADE------EFKAKAQQAVVKLQSGD 245

Query: 236 YSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              +A  KI+    R++ + +  +  + + E      +P  I D I  L  +G + E   
Sbjct: 246 AKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPY-IPDAIQILRDKGILEES-- 302

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGF 349
                        D   ++F   + G  +    +K DG + Y + DLA  +++   E+  
Sbjct: 303 -------------DGATVIF---VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEK-V 345

Query: 350 DNMIYVMG-SDHSGY------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           + +IYV     H  +       KR E +      +   +   L     L  DG   +  +
Sbjct: 346 EWIIYVTDVGQHQHFDMLFKAAKRAEWLPKEGYPRTQHVGFGLV----LGADGKRFRTRQ 401

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL--DFD------------FCKVKEQSKE 448
             G  + L  ++DE  S S   ++   ++ E    D D            +  +K   + 
Sbjct: 402 GTG-LVRLVDLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRET 460

Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           N  F              Y+ YAYAR RSI R++     +L  +       P E      
Sbjct: 461 NYTFSFEQMLDVRGNTAVYLLYAYARIRSIIRKSGKSIDELKENGAIVLTHPDER----- 515

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L + L ++  V+E+A     P  L  YLY+L+  F   ++           + N   
Sbjct: 516 --ALGLFLIQFSEVVEDAVTRLLPNTLCEYLYNLSENFTRFYTS---------CKVNGSP 564

Query: 555 LTMMRLQLVHAVASIINSGLNIIGV 579
               RL L  A A ++     ++G+
Sbjct: 565 EETSRLLLCEATAIVMKQCFKLLGI 589


>gi|302763517|ref|XP_002965180.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii]
 gi|300167413|gb|EFJ34018.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii]
          Length = 578

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 128/579 (22%), Positives = 232/579 (40%), Gaps = 101/579 (17%)

Query: 48  NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  I SR  G+     +P+++A+ ++  I     ++   +AG G+IN+ LS  ++ + L
Sbjct: 48  NAMGIWSRIKGMQSTYGNPVSVAQDVLRNIPRTSMLEKTSVAGAGYINVTLSARFIAEKL 107

Query: 103 SSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           ++++  G++     L  K   V+  F S N    +HVGH R  V+GD++A ++ F    V
Sbjct: 108 TTVLHQGVDALAPELPVKHALVD--FSSPNIAKELHVGHLRSTVIGDSVAKMLEFCNVSV 165

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            R  ++ D             W  Q  +      L   +  G  ++ +G +L   Y    
Sbjct: 166 MRRNHVGD-------------WGTQFGML-----LEHIFETGAEVEAIG-DLQKMYVEAS 206

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDN 279
             F  ++     K  + Q ++K+ R + +     H  + S  D  R   + +  R  +  
Sbjct: 207 ERFKSDEQF---KAKAQQGVVKLQRSEAE----YHAKWKSLCDVSRRAYERTYGRLNVSL 259

Query: 280 LARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
             +    Y   +P       +K    + D  +++F   + G D+   + K+DG+YTY + 
Sbjct: 260 EEKAESFYHPYIPYAIKSLEEKGLLQESDGARVIF---LKGYDIPLIVTKTDGAYTYAST 316

Query: 337 DLA--YFKCKYERGFDNMIYVM---------------------------GSDHSGYVKRL 367
           DLA  +++   E+  + +IYV                             + H G+   L
Sbjct: 317 DLAALWYRVHVEKA-EWIIYVTDVGQKQHFDMFFQAAKLAGWLPEHGFPKAQHIGFGMVL 375

Query: 368 EAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFIT--LRHVVDEVGSDSVR 423
                 +  +K    VLL  L+     R    +    R G++    L    + +G  +V+
Sbjct: 376 GEDGKRIRGRKG--GVLLANLLDDAKSRSHKELIERGRKGEWSGEDLEAAAEALGYGAVK 433

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L         FDF ++ +  K N   Y+ YAYAR  SI R++     +         
Sbjct: 434 YADLKNNRETTYRFDFEQMLD-IKGNTAVYLFYAYARVCSIIRKSGRSIDE--------- 483

Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            I Q  E       E  L +HL ++   +E++     P  L  YLY L+ +F   ++  +
Sbjct: 484 -IKQTCELVVEHPHERSLGLHLVQFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCK 542

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            N  L+            RL L  A   I+  GL ++G+
Sbjct: 543 VNGSLQ---------EASRLLLCEATRLIMKQGLELLGL 572


>gi|313677327|ref|YP_004055323.1| arginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312944025|gb|ADR23215.1| arginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 596

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 129/602 (21%), Positives = 235/602 (39%), Gaps = 125/602 (20%)

Query: 56  PLG----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           PLG    L P   A+ I   ++ + ++ S F   KGF+N+  +     +I S I+ +   
Sbjct: 48  PLGRFSKLSPEQTAKAIGEFMQENSELVSGFNVVKGFLNIVFADKVWLQIASDILNTP-N 106

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G      G +V +E+ S N   P+H+GH R   +G ++A ++  +G +V +   IND G
Sbjct: 107 FGFK-AETGREVMVEYSSPNTNKPLHLGHLRNNFLGYSVAQILKANGNKVHKVQIINDRG 165

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEE 227
             I   ++  + ++ +      S +      G Y  ++ +    ++A+   +       E
Sbjct: 166 IHI-CKSMVAWQKFGEGETPESSGMKGDKLVGKYYVIFDQKYKAQIAELVEAGKTKEEAE 224

Query: 228 KWLPIVKD---------------YSVQAMM-----KIIRDDLKALNIQHD-IFISEDDFH 266
           K  PI+K+               Y++   M     K   +  K + +  D ++     F 
Sbjct: 225 KEAPIMKEAQEMLLKWEQKEPETYALWEKMNGWVYKGFENTYKTMGVDFDKLYYESQTFS 284

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            G    +R + + LA +           K   +   D+         T  G D ++ LL+
Sbjct: 285 LGKEEVLRAVEEGLAYK-----------KEDGSVWIDL---------TEDGLD-EKLLLR 323

Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            DG+  Y   D+     +Y R F   +  IY +G++   + K L  + A +  K A+   
Sbjct: 324 KDGTSVYMTQDIGTAILRY-RDFPKIEQQIYTVGNEQEYHFKVLFIILAKLGYKWAEN-- 380

Query: 384 LLCELVRLYRDGMPI-KMSKRAGD-----------FITLRHVVDEVGS------------ 419
             C  +      +P  KM  R G            F T +   DE+G             
Sbjct: 381 --CYHLSYGMVDLPTGKMKSREGTVVDADDLMEDMFATAKSRTDELGKIDGFNEAEAQEL 438

Query: 420 ----------------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                           D V+ MM      E +DF       Q    P  ++QY +AR  +
Sbjct: 439 YRQLGLGALKYYLLKVDPVKRMMF--NPEESIDF-------QGNTGP--FIQYVHARICA 487

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A+ +  +        ++ P E+      LQLI+   ++P  IE A     P  +A 
Sbjct: 488 ILRKAEQLGIEPQVSESLSSLEPTENNV----LQLII---DFPNKIEEAANGYAPSIIAN 540

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+Y++A  ++  +S       +     +++     R+     VA  I   +N++G E+P 
Sbjct: 541 YVYEVAKAYNKFYSE------VSIFNESDKDALAFRIGFSRIVAETIEKSMNLLGAEAPT 594

Query: 584 EM 585
           +M
Sbjct: 595 KM 596


>gi|298710528|emb|CBJ25592.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 906

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 12/149 (8%)

Query: 38  RDCA---HGHLSTNAAMILSRPL-GLD-----PLTIAELIVARIKIDPDVDSVFIAGKGF 88
           R CA   +G    NAAM L + L G D     P   A  IVA + ++P VD+  ++ +G+
Sbjct: 354 RKCADYKNGDFQCNAAMALFKALKGGDGAPSSPQAAASAIVASLPVNPLVDTTSVSPQGY 413

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN+ L P+++ + ++ ++ +G         K  +V ++F S N    MHVGH R  ++G+
Sbjct: 414 INIRLRPAFINQSIAKVIKNGPAPPEV---KKMRVVVDFSSPNIAKEMHVGHLRSTIIGE 470

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTL 177
            +  ++ F G+ V R  ++ D G Q   L
Sbjct: 471 AICRVLEFCGHTVFRHNHVGDWGTQFGML 499



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%)

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           E+G  +V++  L +  S    F + ++ + ++ N   Y+Q+A+AR  SI  +A+D   +L
Sbjct: 749 EIGYGAVKYYDLRQHPSTSYVFSYDRMLD-TRGNTAVYLQFAHARLASILLKAQD---EL 804

Query: 476 DFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             D+      P++   +  SE  L   L  +  VIE       P +L  YLY LA+ F
Sbjct: 805 HVDVTALKASPEKVSVEHESERALAFELLMFSDVIEACLADLGPNRLCEYLYTLATKF 862


>gi|218678095|ref|ZP_03525992.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 81

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/80 (45%), Positives = 59/80 (73%), Gaps = 3/80 (3%)

Query: 1  MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58
          M LF DF +R+K  L++ID  ++ ++  LD  RI +E PRD +HG ++TNAAM+L++PLG
Sbjct: 1  MNLFTDFEARIKTALEQIDL-VREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLG 59

Query: 59 LDPLTIAELIVARIKIDPDV 78
           +P  +A++I+A+++ D DV
Sbjct: 60 TNPRALADIIIAKLREDADV 79


>gi|301780288|ref|XP_002925560.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 644

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 135/605 (22%), Positives = 251/605 (41%), Gaps = 110/605 (18%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMI----LSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           K +  + I R  + A   LS ++ +      SRP   D    A  +  ++K D  V  + 
Sbjct: 92  KSISAVPISRKEEVADFQLSVDSVLENNNDHSRP---DIQVQAMRLAEKLKCDTVVSEI- 147

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMH 137
             G+G +N  ++   L K +L  ++  G +YG ++ +  G    K+ +EF S N     H
Sbjct: 148 STGQGTVNFKINRELLTKTVLQQVINDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFH 207

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196
           VGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L      + Y++ L +N    
Sbjct: 208 VGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN---- 263

Query: 197 PEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKII 245
           P  +   VY++ V KE  D     K + E    L   + + L +    +D S++  ++I 
Sbjct: 264 PLQHLFEVYVQ-VNKEATDDKNIAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRI- 321

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               K L +  + + S + F+R     +  ++D+        +G+L     K T   D+ 
Sbjct: 322 ---YKRLGVHFNEY-SGESFYREKSQEVLKLLDS--------KGLLQKT-VKGTAVVDLS 368

Query: 306 RKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
                      GD      +++SDG+  Y   DLA    + ++  FD MIYV       +
Sbjct: 369 GN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKH 419

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            +++  +   +    A       E  R    G+   M  R G+   L  V++E+ S  ++
Sbjct: 420 FQQVFQMLQIMGYDWA-------ERCRHVPFGVVQGMKTRRGNVTFLEDVLNEIRSRMLQ 472

Query: 424 FMMLWRKNSE-------------------------LLDFDFCKVKE-QSKENPVFYVQYA 457
            M   +   E                         L D+ F   +  QS+ +   ++QY 
Sbjct: 473 NMASIKTTRELENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRVFQSRGDTGVFLQYT 532

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+    ++ F     + F    + QE +     + ++ HL  +  V+  ++   +
Sbjct: 533 HARLHSL----EETFGCGYLNDFNTGCL-QEPQ----SVSILQHLLRFDEVLYRSSQDLQ 583

Query: 518 PYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           P  +  YL     LA+V H          +  F++ +  ++   RL L  AV S++ +G+
Sbjct: 584 PRHIVSYLLTLSHLAAVAH----------KTLFIKDSPPEVAGARLHLFRAVRSVLANGM 633

Query: 575 NIIGV 579
            ++G+
Sbjct: 634 KLLGI 638


>gi|325287081|ref|YP_004262871.1| Arginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322535|gb|ADY30000.1| Arginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 590

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 129/588 (21%), Positives = 226/588 (38%), Gaps = 112/588 (19%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  I E I   +K +      F   KGF+N+ +S ++     + I     E    +   
Sbjct: 53  NPAQIGEQIGVYLKDNVAEVENFNVVKGFLNIVISDAFYVNFFNGI--KNTENYGFVTES 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L
Sbjct: 111 EDAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKASGKKVYKTQIINDRGIHICKSML 170

Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           +  W+    L+ N  + PE          G Y   + K    ++A+  +        EK 
Sbjct: 171 A--WK----LFGN-GETPESTGIKGDKLVGNYYVRFDKEYKAQIAELVAKGTDAKEAEKQ 223

Query: 230 LPIV------------KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGD 269
            PI+             D  V A+ K +            K L +  D +  E D +   
Sbjct: 224 APILLEAQEMLRKWEAGDKEVVALWKTMNQWVYNGFEVTYKNLGVDFDTYYYESDTYLLG 283

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
               +DI+D    +G  Y       K   +   D+  + L           ++ +L++DG
Sbjct: 284 ----KDIVDEGLEKGVFYR------KEDGSVWIDLSDEGL----------DEKIVLRADG 323

Query: 330 SYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +  Y   D+  A  + K     + M+Y +G++   +   L  +   +    A+    L  
Sbjct: 324 TAVYMTQDIGTAIQRTKDYPDVNGMVYTVGNEQDYHFNVLFLILKKLGFSWAE---QLYH 380

Query: 388 LVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDEVG----------SDSVRFMM 426
           L     D    KM  R G  +           T   + +E+G           +  R + 
Sbjct: 381 LSYGMVDLPSGKMKSREGTVVDADDLMKDMTATAASISEELGKLDGYTDKEKEELYRIIG 440

Query: 427 LWRKNSELLDFDFCK---------VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           L      +L  D  K         V+ Q    P  ++QY YAR +SI R++       DF
Sbjct: 441 LGALKYYILKVDPKKRILFNPEESVEFQGNTGP--FIQYTYARIQSILRKS-------DF 491

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +  +V    ++    E +L+  +  +P V++NA     P  +A Y YDL   F+  + 
Sbjct: 492 D-YTASVTT--NDLHEKEKELLKQIQVFPSVVQNAAQNYSPALVANYTYDLVKEFNSFYQ 548

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +  +   + +  + R+QL   V  +I S   ++G+E PN M
Sbjct: 549 N------VPILPEEDLQKKIFRVQLSKKVGEVIKSAFTLLGIEVPNRM 590


>gi|115495861|ref|NP_001069346.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Bos
           taurus]
 gi|122144258|sp|Q0P5H7|SYRM_BOVIN RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|112362204|gb|AAI20021.1| Arginyl-tRNA synthetase 2, mitochondrial [Bos taurus]
 gi|296484057|gb|DAA26172.1| arginyl-tRNA synthetase 2, mitochondrial precursor [Bos taurus]
          Length = 578

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 255/612 (41%), Gaps = 124/612 (20%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMI----LSRP-LGLDPLTIAELIVARIKIDPDVDSV 81
           K +  + I R  + A   LS ++ +      SRP + +  + +AE    ++K D  V  +
Sbjct: 26  KSISAVPISRKEEVADFQLSVDSLLENNNDHSRPDIQIQAMRLAE----KLKCDTVVSEI 81

Query: 82  FIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPM 136
              G+G +N  ++   L K +L  ++  G +YG ++ +  G    ++ +EF S N     
Sbjct: 82  -STGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPKKRIVVEFSSPNVAKKF 140

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSD 195
           HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L      + Y++ L ++   
Sbjct: 141 HVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSS--- 197

Query: 196 LPEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKI 244
            P  +   VY++ V KE AD     K + E    L   + + L +    +D S+   M+I
Sbjct: 198 -PLQHLFEVYVQ-VNKEAADDKNVAKSAHEFFQRLELGDMQALALWQKFRDLSIDEYMRI 255

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                + L +  D + S + F+R     +  ++D+        +G+L     K T   D+
Sbjct: 256 Y----QRLGVHFDEY-SGESFYREKSQEVLKLLDS--------KGLLQKT-LKGTAVVDL 301

Query: 305 DRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
                       GD      +++SDG+  Y   DLA    + E+  FD MIYV       
Sbjct: 302 SGN---------GDPSSVCTVMRSDGTSLYATRDLAAAIDRMEKYNFDKMIYVTDKGQKK 352

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           + +++  +   +    A+     C+ V     G+   M  R GD   L  V++E+    +
Sbjct: 353 HFQQVFQILQIMGYDWAE----RCQHVPF---GVVQGMKTRRGDVTFLEDVLNEIRLRML 405

Query: 423 RFMMLWRKNSE-------------------------LLDFDFCKVKE-QSKENPVFYVQY 456
           + M   +   E                         L D+ F   +  QS+ +   ++QY
Sbjct: 406 QNMASIKTTKELENPEETAEQVGLAALIIQDFRGFLLSDYQFSWDRVFQSRGDTGVFLQY 465

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIE 510
            +AR  S+    ++ F                ++F+T+ LQ      ++ HL  +  V+ 
Sbjct: 466 THARLHSL----EETFG-----------CGYLNDFNTACLQEPQSVSILQHLLRFDEVLY 510

Query: 511 NATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++   +P  +  YL     LA+V H    H R +P          ++   RL L  AV 
Sbjct: 511 RSSQDLQPRHIVSYLLTLSHLAAVAH-RTLHVRNSP---------PEVAGARLHLFRAVR 560

Query: 568 SIINSGLNIIGV 579
           S++ +G+ ++G+
Sbjct: 561 SVLANGMKLLGI 572


>gi|303243691|ref|ZP_07330032.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
 gi|302485933|gb|EFL48856.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
          Length = 358

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 92/407 (22%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           +LL   EE  +    +Y+V   +   ++ LK LNI+HD F+ E  + +     ++++I  
Sbjct: 3   KLLKKNEENEITKKFEYAVNYALSGFKETLKNLNIKHDKFVWESSYVKN--GMVKEVIKR 60

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAAD 337
           L   G V                    K  ++R  +    +++ L+  + +G+  Y   D
Sbjct: 61  LMETGKV-------------------EKDEVYRLNLSDFGIEKKLVLARLNGTSLYSTRD 101

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K  +  D  I ++G+DH    + + A    +     +I  +  E + L    M 
Sbjct: 102 IAYHIDKM-KNCDIGINILGADHKLTAEMVNASLKLLGYNTPEI--VFYEFISLPEGSM- 157

Query: 398 IKMSKRAGDFITL--------RHVVDEV-------------------GSDSVRFM----- 425
              S R G FI++        R  +DEV                    + +VR+      
Sbjct: 158 ---STRRGRFISIDELFEEAKRRAIDEVKKRGVATDKDEINEIAHKIATGAVRYNIVRIS 214

Query: 426 ----MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD--LDF-D 478
               M++R + E LDF+           PV  +QYA+ARC  I    ++ + +  ++F +
Sbjct: 215 PEKPMVFRWD-EALDFEKVGC-------PV--IQYAHARCCRILENKENNYNEKNINFNE 264

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           LF   +I  E         LI  L ++P ++E +  A++P  +A Y+ D+A  F+  + +
Sbjct: 265 LFNYELIDNEK-------ILIKTLLKFPNIVEKSANARKPQIVAIYMLDVAQAFNRFYGN 317

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N+ +   RL+LV     +I +GLNI+G+E P +M
Sbjct: 318 ------CPILKEENQNIVYSRLKLVECTKIVIENGLNILGIECPGKM 358


>gi|197294584|ref|YP_001799125.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853911|emb|CAM11874.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 557

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 128/598 (21%), Positives = 244/598 (40%), Gaps = 88/598 (14%)

Query: 19  DCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           + KIK+EK   K+L+  V  + +   +    +      ++   L+P  I + I   +   
Sbjct: 5   NIKIKIEKTLKKLLNEDVFLQEQVNNYDFDFSLPLFAYAKKQKLNPALIFKNIEKELIKT 64

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
            +++ +     GF+N+ L    + K IL  I      YG +   K   V I++ S N   
Sbjct: 65  EEIEEIMFLN-GFLNIKLKRKLVAKNILLEINRLQSNYG-DQPNKNKTVVIDYSSPNIAK 122

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQQALYNN 192
              VGH R  V+G+ L ++    G++V    ++ D G Q   +  A   + + ++ L + 
Sbjct: 123 NFSVGHLRSTVLGNALKNIYQKLGFKVIGINHLGDWGTQFGKMIVAYQKWGQKEKILKDP 182

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIR 246
            ++L + Y          + L D+ +   L   +      E W    +D S+    KI  
Sbjct: 183 INELQKLYLLFHQKAEENQTLNDEANEAFLQLEKKNKEYLELW-KYFRDVSLNEFCKI-- 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K L +  D F+ E  ++      I+++++ L ++  + +                + 
Sbjct: 240 --YKILGVSFDYFLGESFYN----DQIKELLEELHQKKLLKQ----------------EE 277

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
           K LL     +   +   + K++GS  Y   DLA  K +Y+      ++YV+G++   Y K
Sbjct: 278 KMLLIELDQLPPGL---IQKTNGSTLYLTRDLATLKYRYKTYNCQTILYVVGNEQKLYFK 334

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           +L+ +   +      I  +   LV +  DG   K+S R   F TL  V+++  + + + +
Sbjct: 335 QLDQIIKKMGYHDVTIENINFGLVLM--DGK--KISTRHHKFTTLMDVINQATNLAEKII 390

Query: 426 MLWR-----------------------KNSELLDFDF-CKVKEQSKENPVFYVQYAYARC 461
                                      KN   LD DF  +   Q K     Y+QY  AR 
Sbjct: 391 QEKNPSLTNIKETAQKIAVGAIIFNDLKNDRHLDIDFNLENILQFKGQTAPYLQYTAARL 450

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+ ++ K     +DF L   N+  Q   F      LI  L+++P ++E +   + P  L
Sbjct: 451 NSLLKKEK-----IDFQLIDENIYQQNHYF-----ALIKLLSQFPWILEKSQKEKMPSIL 500

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           + +L  +    +G ++  R       + ++++ +    L L+ AV  +I   L I+G+
Sbjct: 501 SRHLIKITQNVNGLYAQER-------ILSHDKIIKNTNLLLIKAVLIVIKESLRILGI 551


>gi|302348141|ref|YP_003815779.1| Arginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328553|gb|ADL18748.1| Arginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 633

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAG-KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           DP  +A+++ +R+  D ++  V +   KGF NL      L K +     +G E       
Sbjct: 48  DPDEVAKILASRLASDYNIHYVDVKNLKGFTNLTFRCGDLVKAVVEWAKNGEELEVPKTS 107

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  K+ +E  SANP  P+H+GH R A +GD+LA L+   G+ V   +YI+D G Q++  A
Sbjct: 108 RPLKIVVEHTSANPIHPLHIGHTRNACIGDSLARLLKSRGHSVVTRFYIDDVGRQVSIAA 167

Query: 179 LSV 181
           L V
Sbjct: 168 LGV 170



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 51/292 (17%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+SDG+  Y   DLAY   K+ +   D +I V+G+D      +L      +  ++  +N
Sbjct: 363 LLRSDGTTLYTTRDLAYSILKFSQANADKVINVIGADQRLPQLQLRVALYGLGHRREALN 422

Query: 383 VLL--CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------------------- 419
           ++    E+VRL        M  R G+++TL  ++ E+ +                     
Sbjct: 423 LIHYDYEIVRLTTGS----MHGRRGEYVTLDSLLTELSTRALKEVTERNPSMSKEEAMVI 478

Query: 420 ------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
                  ++R+ M+    S+ L F   K     +E+   Y+QY Y R  +I  +   +  
Sbjct: 479 ARSISVGAIRYFMVHMSASKPLTFSVDKAMNL-RESSGPYLQYTYVRAVNILEKHGKV-- 535

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           DL+      +V P +        +L+V   + P VI  A     P  L  +L DLA  F+
Sbjct: 536 DLN------SVDPDKCT--EPRRRLLVKALKTPLVIAKAADDLAPEDLVSHLADLADSFN 587

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +    ++  +R      ++L  + + +V     I   G++++G+ +   M
Sbjct: 588 TWY---EQDSVIREPDVGAKELKALIVDIVRQSLGI---GMSVLGIPTLRRM 633


>gi|330796163|ref|XP_003286138.1| hypothetical protein DICPUDRAFT_150090 [Dictyostelium purpureum]
 gi|325083883|gb|EGC37324.1| hypothetical protein DICPUDRAFT_150090 [Dictyostelium purpureum]
          Length = 716

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 125/596 (20%), Positives = 245/596 (41%), Gaps = 117/596 (19%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIV--------------VSGIEYGRN-------- 115
           ++ + I  KG++NL +S  YL  IL+  +              +  + Y  N        
Sbjct: 150 IEKIEIGSKGYLNLRVSEEYLLDILNLWIKGHEGKGAEADKFKIKNLIYNENNKTDDNNK 209

Query: 116 -LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
            L  +  KV ++F S N +  +HVGH R   +G+++  ++ + G++V R  +  D G  +
Sbjct: 210 MLPLRSKKVLVDFASPNMSKELHVGHLRSIALGESVCRILEYMGHDVERISHAGDFGTPM 269

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             +        Q  L +    + +  Y G  +    KEL+D YS         K  P   
Sbjct: 270 GIVIAHSLETKQPFLRH----IWDKEYKGEIIIPTPKELSDIYSESK---ARTKTDPEFN 322

Query: 235 DYSVQAMMKIIR-----DDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQG-YVY 287
             ++ +  ++ +     D   +    ++ +I+  D  R   + + D+++ N+  +G   Y
Sbjct: 323 KRTLASAAELQKGPPTPDGGGSDPDIYNAWIALCDASRIGFNQVFDMMNINVNERGESFY 382

Query: 288 EGILPPPKSKTTQKCDM---DRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFK 342
             +LP    + T+K  +   + ++ +F   + G+D   P++  KSDG+Y Y   DLA  K
Sbjct: 383 REMLPKVIDELTEKGFVKLSEGRKCIF---LFGED-KTPVIVQKSDGAYLYATTDLAAIK 438

Query: 343 CKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR-------LY 392
            + E     ++Y+     SDH   + ++   A  +  +K +++ L   +VR         
Sbjct: 439 HRVENDKQWIVYITDDSQSDHFEQIFKIAENAKWLDLEKTRVDHLSFGVVRGSNGSKLSS 498

Query: 393 RDGMPIKM-----------------------------SKRAGDFITLRHV-----VDEVG 418
           RDG P+ +                              + A D    R++     +D+V 
Sbjct: 499 RDGSPVALIDLLHESIERAKQATSISKSFTRAEKIDSDQNARDITVPRYLDSDETLDDVT 558

Query: 419 SDSVR---------FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
            D  +         F +  R NS +  +D        K N   Y+ Y Y R  ++F++A 
Sbjct: 559 DDHFQKIGLGALKYFDLTHRNNSYIFSYDNML---SFKGNTSIYILYCYTRISTLFKRA- 614

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               + + D    N I   +     E  LI   + +  V+++      P  +  YL+++A
Sbjct: 615 ----NFNIDQINLNEI-DFTNLTEKERNLIFLFSRFSDVLKSTEQNLRPGLICDYLWEIA 669

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  +    E+ +    +  N+KL      + +A   I+++GLN++GVE+  ++
Sbjct: 670 NSFHQLY----ESEKFIGSERQNQKLL-----ICYATQRILSTGLNLLGVETVEKL 716


>gi|329888286|ref|ZP_08266884.1| arginyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328846842|gb|EGF96404.1| arginyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 599

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 137/586 (23%), Positives = 230/586 (39%), Gaps = 100/586 (17%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  +  R+  DP + SV +AG GFIN+ LS + L +  + +       G + + +
Sbjct: 54  NPRELAAKVAERLAADPRLSSVEVAGPGFINMKLSNAALAQRAAEVAADKELAGASRV-E 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV I++   N   PMHVGH R A++G++L  L    G +VT + +  D G Q+  L  
Sbjct: 113 PRKVVIDYGGPNVAKPMHVGHLRSAIIGESLKRLFRLRGDDVTGDAHFGDWGFQMGLLIT 172

Query: 180 SVFWRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           +            D  L + +     G +       LAD      L   + K  P  +D 
Sbjct: 173 AC----------GDEGLADAFMVEGDGPFPAETPVTLADLDRLYPLAAGKAKEDPAFRDR 222

Query: 237 SVQAMMKI--------------IRDDLKALNIQHDIFISEDDFHRG--DPSPIRD-IIDN 279
           + +A  ++              +    +AL  ++D    + D   G  D  P+ D +I +
Sbjct: 223 ARKATAELQGGRPGYRALWSHFVAVSREALKREYDDLSVDFDLWNGESDADPLMDEMIAD 282

Query: 280 LARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTY 333
           L  +G + E     ++   +   T      RK+ L   +++      PLL   S+GS  Y
Sbjct: 283 LKAKGLLVEDDGAQVIHVARDGET------RKKKLADGSVIEAPSPPPLLVISSEGSAMY 336

Query: 334 FAADLAY-FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              DLA     K   G D ++YV+    ++H   V R   +A    EK  +    L    
Sbjct: 337 GTTDLATILDRKKSIGPDLILYVVDERQAEHFEQVFRAAYLAGYAPEKSLE---HLGFGT 393

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGSD---------------- 420
               DG P K   RAG  + LR ++D+             +G D                
Sbjct: 394 MNGADGKPFKT--RAGGVLKLRDLIDQATEKARERLHEAKLGDDLPAEEFEDIAHKVAVA 451

Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +++F  L    +    FD  +    + K  P  Y+ Y   R +S+ R+A     +    L
Sbjct: 452 ALKFSDLSNNRTTSYVFDLDRFMSFEGKTGP--YLLYQAVRVKSLLRKAA----EQGVAL 505

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P  VI + +E D     L + L  +     +A   + P  +A + Y LA  F   ++  
Sbjct: 506 AP-IVIEEAAERD-----LALTLDAFDAATADAYDKRSPNLIAEHAYRLAQSFSKFYAA- 558

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A +      RL L  A    + + L ++G+E+P  M
Sbjct: 559 -----CPILVAPDEATKGSRLALAAATLHQLETALRLLGIETPERM 599


>gi|332886430|gb|EGK06674.1| arginyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 598

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 129/598 (21%), Positives = 231/598 (38%), Gaps = 128/598 (21%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117
           P   A+ I   +K +    S F   KGF+NL ++ +    +L+ +  +   GI    N  
Sbjct: 56  PEQTAQEIGEWLKANASEVSSFNVIKGFLNLTIATTCWIDVLNEVYAAESYGITKADN-- 113

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                V +E+ S N   P+H+GH R  ++G  L+ ++  +G  V +   +ND G  I   
Sbjct: 114 -NSPLVMVEYSSPNTNKPLHLGHIRNNLLGFALSEVLKANGNRVVKTNIVNDRGIHICKS 172

Query: 178 ALSVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPEE 227
            L+  W+        + + PE          G Y  ++ KH   ELA+  S  L     E
Sbjct: 173 MLA--WQKW-----GNGETPESTGKKGDHLVGDYYVMFDKHYKAELAELQSKGLSKEEAE 225

Query: 228 KWLPIVK------------DYSVQAMMKIIR--------DDLKALNIQHD-IFISEDDFH 266
               ++             D    ++ K +         +  K L +  D I+   + + 
Sbjct: 226 AQSTLMAEARNMLRLWEGGDVETVSLWKKMNSWVYAGFDETYKRLGVDFDEIYYESETYL 285

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            G     +D + N  + G +Y            QK D     +    T  G D  + LL+
Sbjct: 286 DG-----KDTVLNGLKNGVLY------------QKED---GSIWIDLTAEGLD-HKLLLR 324

Query: 327 SDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           SDG+  Y   D+  A  + K  +  + MIYV+G++ + + + L  V   +  +  +  V 
Sbjct: 325 SDGTSVYMTQDIGTAQQRFKAHKDLNKMIYVVGNEQNYHFQVLSIVLDKLGFEFGKGLVH 384

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               +    +G   KM  R G  +    +VDE                            
Sbjct: 385 FSYGMVELPEG---KMKSREGTVVDADDLVDEMVATAKETSQELGKLEGVSEQEANNIAR 441

Query: 417 -VGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
            VG  ++++ +L    +KN      E +DF+          N   ++QY +AR +SI R+
Sbjct: 442 MVGMGALKYFILKVDPKKNMTFNPKESIDFN---------GNTGPFIQYTHARIQSILRK 492

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A +    +         +  +      E  L+  +AEY  +++ A     P  +A Y+YD
Sbjct: 493 AAEQGISIP------TTLSADISLSVKEEGLVQQVAEYASIVKQAGDEYNPALIANYIYD 546

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   ++  +           ++  N  L   RL L   V  ++ SG++++G+E P+ M
Sbjct: 547 LVKEYNQFYHD------YTILKEENADLKNFRLILSDNVGRVVKSGMSLLGIEVPDRM 598


>gi|91079400|ref|XP_966449.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum]
 gi|270004375|gb|EFA00823.1| hypothetical protein TcasGA2_TC003711 [Tribolium castaneum]
          Length = 554

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 108/494 (21%), Positives = 198/494 (40%), Gaps = 80/494 (16%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--F 182
           +EF S N   P H+GH R  ++G+ + +L +F   +VT+  Y+ D G Q   + + V   
Sbjct: 108 VEFSSPNIAKPFHMGHLRSTIIGNFIGNLNSFLNNKVTKLNYLGDWGTQFGFIKVGVDEL 167

Query: 183 WRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
              Q+A+ NN   L  E Y     L      +AD+   E      EK  P   +Y  +  
Sbjct: 168 QHTQEAIKNNPLKLLYESYVHANKLAEKDPTVADRARQEFNKL--EKGAPEGLEY-WKEY 224

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+  +++L+A   +  +   E +F        I+++ID L+ +  V +      +     
Sbjct: 225 MQYSQNELEATYKRLGVVFDEYNFESNYSAKDIQNVIDILSSKHIVQK------EGDGKL 278

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D++++++              ++KSDGS  Y   D+A    +Y R  FD M+Y++ + 
Sbjct: 279 SVDVNKRKV-------------SIMKSDGSTLYLTRDIAAAIDRYNRYSFDKMLYIVDNS 325

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +   L+A+   +S   A         ++  + G    MS R G  + LR ++DE   
Sbjct: 326 QSDHFNNLKAILHKMSLPWAH-------KLQHVKFGRIRGMSTRKGTAVFLRDILDECRE 378

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-----------------QSKENPVFY 453
                 V S + R  +     S++L      V +                 Q + +    
Sbjct: 379 LMIKKQVESPNTRVPIEDSAVSDILGVSCVIVNDLKQRRQKDYEFTWDSVLQVQGDTGVK 438

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY + R  S+ R +            P+ VIP E   +     L+  +A +  ++  + 
Sbjct: 439 LQYTHCRLYSLERNSGAT--------RPKKVIP-EVLKEPEATALVREIARFHEILNRSN 489

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIIN 571
              E   L  YL+ L +           N  L+ +   N   ++   RL L      ++ 
Sbjct: 490 EQLEACILVTYLFRLCNQI---------NKALKVLPVKNTDPEIASQRLLLFITARQVLG 540

Query: 572 SGLNIIGVESPNEM 585
            G++I+G+   +EM
Sbjct: 541 KGMSILGLHPLDEM 554


>gi|296121593|ref|YP_003629371.1| arginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013933|gb|ADG67172.1| arginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 660

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 1/139 (0%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           D   G    N AM + + +G     IAE IV  +KID   +   +AG GFINL L  S+L
Sbjct: 34  DTRFGDFQANCAMPMQKSVGKPAREIAEQIVQGLKIDDICEPATVAGPGFINLKLKESWL 93

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  +      ++ G        +  ++F S N   PMHVGH R  V+G  L  ++   G
Sbjct: 94  EQAATE-CAHDVQLGLEPASPSRRYIVDFSSPNVAKPMHVGHLRSTVIGHALYKVLKKLG 152

Query: 159 YEVTREYYINDAGAQINTL 177
           + V  + +I D G Q   +
Sbjct: 153 HSVQSDNHIGDWGTQFGMI 171



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 50/294 (17%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG++TY   DLA  + + +    D ++YV+ S  S +   L A A  +     ++  +
Sbjct: 383 KSDGAFTYATTDLATIEYRVDSLQADAILYVVDSRQSEHFDMLFATARKLGYSNVELTHV 442

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               + L  D  P K   R+GD + L  ++DE                            
Sbjct: 443 KFGTI-LGEDKRPFKT--RSGDTVGLESLLDEAVVRARQIVNAGDDGKPTGAELDDTTRQ 499

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG   + +  L         F F K+   ++ +   Y+QYAYAR   IFR+    
Sbjct: 500 AIAEIVGIGGIIYADLHHSRESDYTFSFEKML-ATRGDTATYMQYAYARTHGIFRKGGID 558

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              L     P  +          E  L + L  +   + +      P  L  YL++ A+ 
Sbjct: 559 IEQLRKGKHPLRLT------QPYERMLALQLVRFGEALHDVAAEYRPNVLTQYLFETANR 612

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +    E P L+    + R     RL L    A ++  GL ++G+    +M
Sbjct: 613 FSTFFD---ECPVLKETDDSIRN---SRLLLCDWTARVMKEGLGLLGIRVAEKM 660


>gi|229828295|ref|ZP_04454364.1| hypothetical protein GCWU000342_00353 [Shuttleworthia satelles DSM
           14600]
 gi|229792889|gb|EEP29003.1| hypothetical protein GCWU000342_00353 [Shuttleworthia satelles DSM
           14600]
          Length = 588

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 120/609 (19%), Positives = 240/609 (39%), Gaps = 97/609 (15%)

Query: 29  LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           L R+ +  RP  C +     N AM  ++     P  IA+ I   +  D    S      G
Sbjct: 25  LGRVTVSNRPDLCEY---QCNGAMAGAKTYHKAPFMIADEIADCLSGDEMFASAESVKPG 81

Query: 88  FINLYLSPSYLRKILSSIVVS----GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           F+N+ +S  +L    + +       G+E  RN       + I++   N   P+HVGH R 
Sbjct: 82  FLNIRVSGDFLADYANQMAADQERLGLEKERN----PRSIIIDYGGPNVAKPLHVGHLRS 137

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A++G+ +  +  F+G +V  + ++ D G Q+  +   +  R    +Y  D+D  +G YP 
Sbjct: 138 AIIGEAVKRIARFAGNQVLGDIHLGDWGLQMGLIITELRERKPDLVYF-DADY-QGAYPE 195

Query: 204 -----------VYLKHVGKELADK-YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIR 246
                      +Y    GK   D+ Y +  +    E     +    + ++ ++  +  ++
Sbjct: 196 EAPFTISELEEIYPCASGKSKEDEGYHAAAMQATNELQQGRRGYQALLEHILRVSVSDLK 255

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            + + L++  D+++ E D     P+    +++ + R G+ Y                +  
Sbjct: 256 KNYEKLSVSFDLWMGESDAQPYIPA----MVEKMKRDGFAY----------------LSE 295

Query: 307 KQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
             L+       D  + P   +LKSDGS  Y   DLA    + ER   D +IYV+      
Sbjct: 296 GALVVDVAEGSDTKEMPPCMILKSDGSALYNTTDLATLVMREERYQPDEIIYVVDKRQEL 355

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           +  +   VA        +  ++      +  RDG P K   R G  + L +++ +V +  
Sbjct: 356 HFTQCFRVARKTKIVPPETGLVFLGFGTMNGRDGKPFKT--RDGGVMRLENLLADVNAKM 413

Query: 422 VRFMMLWR--------KNSELLDFDFCK---VKEQSKENPVF--------------YVQY 456
           +  ++           + +E++     K   +  Q+ ++ VF              Y+ Y
Sbjct: 414 LEKILEGGHMQKEEAGRTAEIVGLAALKYGDLSNQASKDYVFDLDRFTSAEGNTGPYILY 473

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
              R +SI ++ ++     +  L    V+P  S  +   +QL     +  R    A    
Sbjct: 474 TIVRIKSILKRYEE-----ENSLEGLRVLPPASPSEKDLMQLAARFGDNFRT---AYEEL 525

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+KL  Y+Y+L++ F+  +         + +   + +     + L+     I+   +++
Sbjct: 526 APHKLCAYIYELSNAFNRFYHE------TKILSEEDEEKKASWIALLSLTKRILEKSIDL 579

Query: 577 IGVESPNEM 585
           +G  +P  M
Sbjct: 580 LGFAAPERM 588


>gi|159900648|ref|YP_001546895.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893687|gb|ABX06767.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 591

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGI 110
           ++  G  P  +A+ +VA ++  PD  V S  I+G  ++N  L+P ++ + +L+ I   G 
Sbjct: 48  AKSRGSTPAQVAQELVAALQFAPDSLVASATISGP-YVNFNLNPQTFAKAVLADIQAGGA 106

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            YG +  G   KV +E+ S N    MHVGH R  ++G  +A+L    GYEV R+ ++ D 
Sbjct: 107 TYGSSTKGNNRKVIVEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRDNHLGDY 166

Query: 171 GAQIN 175
           G Q  
Sbjct: 167 GKQFG 171



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 56/294 (19%)

Query: 326 KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +SDG   Y   D+A  K + E+ +  D MIY++G     + ++  A++ A+    A++ +
Sbjct: 320 RSDGGTLYMTRDIATIKYR-EQTYNPDAMIYIVGQPQELHFRQTFAISKALGYTDAEL-I 377

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
            +         G P  +S R G+ I L  ++DE                           
Sbjct: 378 HISFGTVFDAKGQP--LSTRKGNMIYLETLLDEARNRAKALIEQKMAEGKTQLTAELIDQ 435

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471
               VG  +V +  L++     +  D+ ++   +   +P  Y+QY +ARC SI R    +
Sbjct: 436 VAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSP--YLQYMHARCCSILRDFGKL 493

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D  L             ++E  L+  LA  P++IE A     P+ +A +LY  A  
Sbjct: 494 PASYDGSLLSH----------SAETGLLKELARLPQIIEEAAARYAPFVVADWLYATARA 543

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +           ++A   +L + R  +V A A  + +GL ++ + +P  M
Sbjct: 544 FSAFYDA------CSVLKAETPELRVARGHVVAATAQALRNGLALLSIAAPERM 591


>gi|73973434|ref|XP_539032.2| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 1 [Canis
           familiaris]
          Length = 578

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 136/608 (22%), Positives = 255/608 (41%), Gaps = 116/608 (19%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMI----LSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           K +  + I R  + A   LS ++ +      SRP   D    A  +  ++K D  V  + 
Sbjct: 26  KSISAVPISRKEEVADFQLSVDSLLENNNDHSRP---DTQVQARKLAEKLKCDSVVSEI- 81

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMH 137
             G+G +N  ++   L K +L  ++  G +YG ++ +  G    K+ +EF S N     H
Sbjct: 82  STGQGTVNFKINRELLTKTVLQQVIKDGSKYGLKSELFSGLPQKKIVVEFSSPNIAKKFH 141

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196
           VGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L      + Y++ L ++    
Sbjct: 142 VGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSS---- 197

Query: 197 PEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKII 245
           P  +   VY++ V KE AD     K + E    L   + + L +    +D S++  +++ 
Sbjct: 198 PLQHLFEVYVQ-VNKEAADDKNVAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRVY 256

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               K L +  D + S + F+R     +  ++D+   +G + + I      K T   D+ 
Sbjct: 257 ----KRLGVHFDEY-SGESFYREKSQEVLKLLDS---KGLLQKTI------KGTAIVDLS 302

Query: 306 RKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
                      GD      L++SDG+  Y   DLA    + ++  FD MIYV       +
Sbjct: 303 GN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKH 353

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            +++  +   +    A+     C+ V     G+   M  R GD   L  V++E+    ++
Sbjct: 354 FQQVFQMLQIMGYDWAE----RCQHVPF---GVVQGMKTRKGDVTFLEDVLNEIRLRMLQ 406

Query: 424 FMMLWR-------------------------KNSELLDFDFCKVKE-QSKENPVFYVQYA 457
            M   +                         K   L D+ F   +  QS+ +   ++QY 
Sbjct: 407 NMASLKTTKVLENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRVFQSRGDTGVFLQYT 466

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIEN 511
           +AR  S+    ++ F                ++F+T+ LQ      ++ HL  +  V+  
Sbjct: 467 HARLHSL----EETFG-----------CGYLNDFNTACLQEPQSVSILQHLLRFDEVLYR 511

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           ++   +P  +  YL  L+ +       G  +  L +V+ +  ++   RL L  AV S++ 
Sbjct: 512 SSQDLQPRHIVSYLLTLSHL------AGMAHKTL-YVKDSPPEVAGARLHLFRAVRSVLA 564

Query: 572 SGLNIIGV 579
           +G+ ++G+
Sbjct: 565 NGMKLLGI 572


>gi|195384810|ref|XP_002051105.1| GJ14045 [Drosophila virilis]
 gi|194147562|gb|EDW63260.1| GJ14045 [Drosophila virilis]
          Length = 594

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 119/605 (19%), Positives = 236/605 (39%), Gaps = 127/605 (20%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM LS+ +   G++  P  I   I       P ++ + +AG GF+N++LS  +
Sbjct: 45  GDYQCNNAMGLSKKMKDEGINKSPRDIGLEIQRCCPASPIIEKIEVAGPGFVNIFLSKEF 104

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               L+ ++  G++  +       ++ ++F S N    MHVGH R  ++G++++ L+ F 
Sbjct: 105 AVSSLTRMLREGVKPPKV---PRKRILVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFL 161

Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198
            ++V R  ++ D G Q   L                    L  F++  +  ++ D    +
Sbjct: 162 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGDLQEFYKESKKRFDADESFKK 221

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             Y  V     G+  A K            W         Q +  + R + + +  + D+
Sbjct: 222 RAYNRVVTLQSGEPAATK-----------AW---------QQICDVSRKEFQKIYDRLDV 261

Query: 259 FISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            I E    RG+    S +  +++ L  +G +                ++D  + +    +
Sbjct: 262 TIQE----RGESYYQSRMLTVVEFLRNKGLL----------------ELDDGREIMWPDV 301

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVAAAV 374
               +   ++KSDG +TY  +D+A  +C+ E      +IYV+ +  S +   +   A   
Sbjct: 302 NKSGIPLTIVKSDGGFTYDTSDMAAIRCRLEEDLATWLIYVVDAGQSTHFHGIFKAA--- 358

Query: 375 SEKKAQINVLLCEL------VRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            E+   +N  +  +      V L  DG   K   R+GD + L  ++DE            
Sbjct: 359 -ERAGILNPNIHRVDHVQFGVVLGEDGK--KFKTRSGDTVKLSDLLDEGLKYSLKQLQER 415

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            V    +++  L         F F K+ +  + N   Y+ Y Y 
Sbjct: 416 GRDQILTPNELVEAQEAVAYGCIKYTDLCHNRISDYIFSFDKMLD-DRGNTAVYLLYTYT 474

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SI R + + F +L  ++  +  I  E E    E +L+  L +   V+         +
Sbjct: 475 RICSIARNSGEDFSNLA-EILDKFQIVLEHE---KEWKLVKTLLKLHDVLMKCANGLFLH 530

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINSGLN 575
            L  + Y++ +VF   + +         ++ N      K+   R+ +  A A+++ +  +
Sbjct: 531 FLCEFCYEVCTVFAEFYDN------CYCIEKNKAGEICKINHSRILICEATAAVLRTCFH 584

Query: 576 IIGVE 580
           I+G++
Sbjct: 585 ILGLK 589


>gi|313224957|emb|CBY20749.1| unnamed protein product [Oikopleura dioica]
          Length = 653

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 6/146 (4%)

Query: 37  PRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           P+    G    N++M ++  L      + P  +A+ I+  I  +  +    IAG GFIN+
Sbjct: 97  PKQEKFGDYQCNSSMQIAGMLKDAGEKIAPRDVAKKILDNIPSNNLIKETTIAGPGFINV 156

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   Y+   +  +   G++Y ++   +G KV +++ S N    MHVGH R  ++GD++A
Sbjct: 157 FMCQKYMVNRIGELNNLGVQYDKSK-SRGRKVVVDYSSPNIAKEMHVGHLRSTIIGDSIA 215

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
           +L    GYEV R  ++ D G Q   L
Sbjct: 216 NLFEAYGYEVLRINHVGDWGTQFGML 241



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 62/306 (20%), Positives = 124/306 (40%), Gaps = 51/306 (16%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---- 371
           G ++   ++K+ G YTY  +DL     +  E   D +IYV+      + +++ A A    
Sbjct: 362 GIEIPLTVVKTGGGYTYDTSDLTALNYRVNEIKGDILIYVVDCGQELHFRQVFAAASKAG 421

Query: 372 ----AAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI---------- 408
               A    + A   V+L E  + +  R G  +++        KRA D +          
Sbjct: 422 FYDAAQTRVEHAGFGVVLGEDKKKFKTRSGETVRLVDLLDEGIKRANDQLLERGREKELT 481

Query: 409 --TLRHVVDEVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
              ++   D V    +++  L   RKN  +  FD        + N   Y+ Y   R RS+
Sbjct: 482 AQEMKDAADAVAYGCIKYADLKSNRKNDYVFSFDQML---DIRGNTAAYLLYQLTRIRSV 538

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKL 521
            R+ +    D +      + I    +FD +   E +L   +  +  ++  A      + +
Sbjct: 539 NRKVEGKITDEEI-----SKIATSGQFDLADPREFKLAKTILRFHEILSQAQRDLLIHPI 593

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRK--LTMMRLQLVHAVASIINSGLNIIGV 579
             ++YDL++ F   +       +   ++  + K  + + RL L  A AS++ +   I+G+
Sbjct: 594 CEWMYDLSNAFSQFYD------KCYIIEKKDGKEEIKVGRLILASATASVMEAAFKILGI 647

Query: 580 ESPNEM 585
            + ++M
Sbjct: 648 RTLHKM 653


>gi|315046758|ref|XP_003172754.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311343140|gb|EFR02343.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 634

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 148/623 (23%), Positives = 236/623 (37%), Gaps = 152/623 (24%)

Query: 46  STNAAMILS----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK- 100
           +TNA ++L     +  G++P  +A+ IV++    P ++   +A   F+ L  SP  L   
Sbjct: 67  ATNADLMLVTARLKLKGINPKQLAQDIVSKFPSTPLLNPP-VANGIFVPLSFSPDTLPNL 125

Query: 101 ILSSIVVSGIEYGRNLI-----------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           IL  I      YG N +           GK  KV +EF S N     H GH R  ++G  
Sbjct: 126 ILPFIFDRRASYGSNQLQGLQDPKDESSGK-KKVIVEFSSPNIAKEFHAGHLRSTIIGAY 184

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +++L    G++V R  Y+ D G Q   LA  V W+   +         E  +    LKH+
Sbjct: 185 ISNLYESMGWDVVRVNYLGDWGKQFGLLA--VGWQRFGS---------EELFAKEPLKHL 233

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E+  K +S  L  PE++     +D            + K L  + + F  +     GD
Sbjct: 234 -LEVYAKINS--LFAPEKEASEQARDRGEDTS----EIESKGLFAERNAFFQK--MEDGD 284

Query: 270 PSPI------RDI-----IDNLARQGY---VYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           P  I      RD+     I   AR      VY G        T +   +++ +LL +   
Sbjct: 285 PDAIALWKRFRDVSIERYISTYARLNIKFDVYSG------ESTVKALTVEKAELLLKEKG 338

Query: 316 V--------------------GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           V                    G  V R  +   G+ TY   D+A    + E+  FD MIY
Sbjct: 339 VYTEDNGTWIIDFKKHGAPNLGIAVARTRI---GTTTYLLRDVAAVLERVEKYQFDKMIY 395

Query: 355 VMGSDHSGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           V+ ++   Y +RL           V+ K   +N            G    MS R G    
Sbjct: 396 VVSTEQDLYFQRLFKTIELMGYPDVAAKLEHVNF-----------GKVQGMSSRLGTVKI 444

Query: 410 LRHVVDEVGSDSVRFMMLWRKN----------SELLD---------------------FD 438
           L  ++DE GS     M   RKN          +E+ D                     FD
Sbjct: 445 LSDILDECGSAMHNVM---RKNPTKYDQIEKPAEVADILGITAVMVQDMAGKRIHNYPFD 501

Query: 439 FCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSE 495
             K+   +    P  Y+QYA+AR  SI R+          D+ P+ +         +   
Sbjct: 502 IAKMTSFEGDTGP--YLQYAHARLCSIVRKV---------DIDPQEITTANFSLLKEPHA 550

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + ++  +A+YP V  NA    EP     YL+ LA      +        ++ + A + ++
Sbjct: 551 INILRLMAQYPDVTCNALKTLEPTTTLTYLFRLAHQVSSGYD------VIKVIGAESHEV 604

Query: 556 TMMRLQLVHAVASIINSGLNIIG 578
           T+ RL L      ++ +G+ ++G
Sbjct: 605 TVARLALYEGARQVLENGMRLLG 627


>gi|281343256|gb|EFB18840.1| hypothetical protein PANDA_015081 [Ailuropoda melanoleuca]
          Length = 548

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 129/575 (22%), Positives = 242/575 (42%), Gaps = 108/575 (18%)

Query: 54  SRP-LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           SRP + +  + +AE    ++K D  V  +   G+G +N  ++   L K +L  ++  G +
Sbjct: 27  SRPDIQVQAMRLAE----KLKCDTVVSEI-STGQGTVNFKINRELLTKTVLQQVINDGSK 81

Query: 112 YG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           YG ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+
Sbjct: 82  YGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYL 141

Query: 168 NDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL 221
            D G Q   L      + Y++ L +N    P  +   VY++ V KE  D     K + E 
Sbjct: 142 GDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEATDDKNIAKSAHEF 196

Query: 222 ---LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
              L   + + L +    +D S++  ++I     K L +  + + S + F+R     +  
Sbjct: 197 FQRLELGDTQALALWQKFRDLSIEEYVRI----YKRLGVHFNEY-SGESFYREKSQEVLK 251

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYF 334
           ++D+        +G+L     K T   D+            GD      +++SDG+  Y 
Sbjct: 252 LLDS--------KGLLQKT-VKGTAVVDLSGN---------GDPSSICTVMRSDGTSLYA 293

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             DLA    + ++  FD MIYV       + +++  +   +    A       E  R   
Sbjct: 294 TRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLQIMGYDWA-------ERCRHVP 346

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LD 436
            G+   M  R G+   L  V++E+ S  ++ M   +   EL                  D
Sbjct: 347 FGVVQGMKTRRGNVTFLEDVLNEIRSRMLQNMASIKTTRELENPQETAERVGLAALIIQD 406

Query: 437 FDFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           F    + +         QS+ +   ++QY +AR  S+    ++ F     + F    + Q
Sbjct: 407 FKGLLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSL----EETFGCGYLNDFNTGCL-Q 461

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPR 544
           E +     + ++ HL  +  V+  ++   +P  +  YL     LA+V H          +
Sbjct: 462 EPQ----SVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAH----------K 507

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             F++ +  ++   RL L  AV S++ +G+ ++G+
Sbjct: 508 TLFIKDSPPEVAGARLHLFRAVRSVLANGMKLLGI 542


>gi|254388302|ref|ZP_05003537.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294814347|ref|ZP_06772990.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442738|ref|ZP_08217472.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197702024|gb|EDY47836.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326946|gb|EFG08589.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 587

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 51/295 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKK 378
           PL+  KS+G Y Y A DL+  + + +R G D +IYV+ +  S + K + E    A    +
Sbjct: 312 PLIVRKSNGGYGYAATDLSAIRDRVQRLGADTLIYVVDARQSLHFKMVFETARRAGWLGE 371

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               V L     L  DG P K   R G+ + L  ++DE                      
Sbjct: 372 GVKAVQLAFGTVLGSDGKPFKT--REGETVRLVDLLDEAIDRASAVVREKARDLTDEEIA 429

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A ++
Sbjct: 430 ERGTQVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIQSIKRKAGEV 488

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            P    +L              +E  L +HL ++   I     A EP+KLA YLY LAS 
Sbjct: 489 RPKAHPEL----------ALAPAERALGLHLDQFAETIAEVAAAYEPHKLAAYLYQLAS- 537

Query: 532 FHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              H +  R   + + + A N  ++   RL L+   A  ++ G+ ++G+ +P  +
Sbjct: 538 ---HLT--RFYDQCQVLSAENPPEVVENRLFLIDLTARTLHQGMGLLGIRTPERL 587



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 1/133 (0%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  +V  I  +  +  + ++G GF+N+ L+   + + L++
Sbjct: 41  FQANGILALAKKLKGNPRELAAQVVDAIGENDVLKEIEVSGPGFLNITLTDGAIVRTLAA 100

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
                   G  L        I++   N    MHVGH R AV+G  +  ++ F+G  V R 
Sbjct: 101 RAADD-RLGVPLRDHPGTTVIDYAQPNVAKEMHVGHLRSAVIGAAMTEILEFTGETVVRR 159

Query: 165 YYINDAGAQINTL 177
           ++I D G Q   L
Sbjct: 160 HHIGDWGTQFGML 172


>gi|301114575|ref|XP_002999057.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262111151|gb|EEY69203.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 815

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 13/169 (7%)

Query: 19  DCKIKVEKKILDRIVIERPR----DCAHGHLSTNAAMILSRPL------GLDPLTIAELI 68
           D  IK     LD   +E  R    +   G    N+AM +   L         P  +A  I
Sbjct: 242 DAAIKAAYPGLDVPPVEVTRTNVKNAKFGDYQCNSAMSIFTALKGTPNAARSPRDVANTI 301

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           +A +     +D + +AG GFIN +L+  ++   L +++ +G++       K   + ++F 
Sbjct: 302 IAAMPETRVLDRLTVAGAGFINAFLTKEFVAARLQNVLANGVQPAPQ---KKQTIVVDFS 358

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           S N    MHVGH R  ++GDT++ ++ F GY+V R  ++ D G Q   L
Sbjct: 359 SPNIAKDMHVGHLRSTIIGDTMSRILEFQGYDVKRINHVGDWGTQFGML 407


>gi|195175085|ref|XP_002028293.1| GL14083 [Drosophila persimilis]
 gi|194117430|gb|EDW39473.1| GL14083 [Drosophila persimilis]
          Length = 664

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 170/399 (42%), Gaps = 63/399 (15%)

Query: 42  HGHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           +G    N AM L++ +   G++  P  IA  +     + P ++ + + G GF+N+YLS  
Sbjct: 114 YGDYQCNNAMGLAKKMKEMGVNRTPRDIANELQKCCPLSPIINKLEVGGAGFVNVYLSKD 173

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y  + L +I+ +GI+  R L     +V ++F S N    MHVGH R  ++G+++  L+ F
Sbjct: 174 YAAQSLKNILRNGIKPPRVL---KRRVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLLEF 230

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
             ++V R  ++ D G Q   L   +  R+   L   +   P G     Y     KE   +
Sbjct: 231 LQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFL---NKSPPIGDLQSFY-----KESKKR 282

Query: 217 YSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISE--DDFH 266
           + +E   F +  +  +V   S         Q +  + R + +A+  + D+ + E  + F+
Sbjct: 283 FDTE-EEFKKRAYNRVVSLQSGEPNSRKAWQLICDVSRQEFQAIYDRLDVTLRERGESFY 341

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +     + D + N        + +L   + +     + DR  +              ++K
Sbjct: 342 QSRMLSVVDFLRN--------KNMLEHDEGRQIMWPNEDRSGIPL-----------TIVK 382

Query: 327 SDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVA--------AAVSEK 377
           SDG +TY  +D+A  + + E      +IYV+ S  S +   +   A         A    
Sbjct: 383 SDGGFTYDTSDMAAIRHRIEEEHCTWIIYVVDSGQSTHFNTIFKAAERCCILNPTAHRVH 442

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
             Q  V+L E      DG   K   R+GD + L  +++E
Sbjct: 443 HVQFGVVLGE------DGKKFKT--RSGDTVKLSDLLNE 473


>gi|319952158|ref|YP_004163425.1| arginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420818|gb|ADV47927.1| arginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 592

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 222/578 (38%), Gaps = 90/578 (15%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P+ I   I A +  +    S F   KGF+NL ++ ++      +I  +   +G      
Sbjct: 53  NPVQIGNEIGAYLVQEVAEVSGFNVIKGFLNLVITDAHYLADFKTIAAN-TTFGFVEQDA 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTL 177
              V +E+ S N   P+H+GH R  ++G  +A ++  SG +V +   IND G  I  + L
Sbjct: 112 SNAVMVEYSSPNTNKPLHLGHVRNNLLGYAVAEILKASGKKVYKTQIINDRGIHICKSML 171

Query: 178 ALSVFWRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--- 233
           A   F + +         D   G Y   + K    E+AD  +  L     EK  PI+   
Sbjct: 172 AWQKFGKGETPESTGLKGDKLVGNYYVAFDKAYKVEIADLVAGGLAKEAAEKQAPILLEA 231

Query: 234 ---------KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V ++ K +            K L +  D    E D +          
Sbjct: 232 KQMLLKWEAGDEEVVSLWKTMNQWVYKGFAVTYKNLGVDFDTLYYESDTY---------- 281

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  +  V EG+      KT      +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 282 ---LLGKDVVAEGL------KTGVFFKKEDGSVWIDLTDEGLD-EKIVLRSDGTAVYMTQ 331

Query: 337 DL--AYFKCKYERGFDNMIYVMGSDHSGYVKRL----EAVAAAVSEKKAQINVLLCELVR 390
           D+  A  + K       M+Y +G++   + K L    + +  + S+    ++  + +L  
Sbjct: 332 DIGTAIQRVKDNPDVSGMVYTVGNEQDYHFKVLFLILKKLGFSWSKNLFHLSYGMVDLPS 391

Query: 391 ---LYRDGMPI-------KMSKRAGDFIT----LRHVVDEVGSDSVRFMMLWRKNSELLD 436
                R+G  +       +M+  AG+       L    D    D  + + L      +L 
Sbjct: 392 GKMKSREGTVVDADDLMQEMTTTAGEISQELGKLEDYSDAEKQDLYKMIGLGALKYYILK 451

Query: 437 FDFCK---------VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            D  K         V  Q    P  ++QY YAR +SI R+A+++           N    
Sbjct: 452 VDPKKRILFDPEESVDFQGNTGP--FIQYTYARIQSILRKAEEL---------SLNGFAG 500

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            +     E +LI  L  YP  I+ A     P  +A Y YDL   F+  +    +N  +  
Sbjct: 501 LTTLHEKEKELIKQLQGYPEAIQLAAANYSPALVANYTYDLVKEFNSFY----QNVSILG 556

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  ++K    R+QL   V+ +I S   ++G+E P  M
Sbjct: 557 EEEEHKK--AFRIQLSKKVSEVIQSSFKLLGIEVPERM 592


>gi|323651380|gb|ADX97536.1| arginyl-tRNA synthetase [Terra1 virus]
          Length = 438

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 54/303 (17%)

Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           D+ + PL+  KSDG +TY  +DLA  K ++ E+  D +IYV+ S  S + + +  +A  +
Sbjct: 155 DEFEIPLILVKSDGGFTYDTSDLAAIKYRFMEQKVDRVIYVVDSGQSQHFQMIFKLANQL 214

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           S  K +    +   V L  +G  +K   R+G+ + LR V+ +V   ++      R+N + 
Sbjct: 215 SWCKNEQCYHIGFGVILGNNGKRLK--TRSGETVLLRDVLQQVQDRAILVTKSLRQN-DT 271

Query: 435 LDFDFCKVKE----------------------------QSKENPVFYVQYAYARCRSIFR 466
           L+ D  K+ +                             +K N   Y+ Y  ARC  I R
Sbjct: 272 LEHDISKISKIIANNCIKYSDLNNPRENNYRFDVDKMTNTKGNTAVYLMYTLARCHGILR 331

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +  ++   LD D+       + ++ DT  L ++  L +Y   IE +     P+ +  YLY
Sbjct: 332 KISNLSVILDGDI-------EINDADTRCLAIL--LLKYVEFIEKSIKEHAPHYICNYLY 382

Query: 527 DLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +L+      +S+ R    EN  + +V  N       R++L+H    I++    +IG+ES 
Sbjct: 383 ELSVQITKFYSNNRCLEIENGEIIYVYHN-------RIRLIHLAIIIMSKMFELIGLESV 435

Query: 583 NEM 585
            ++
Sbjct: 436 EQI 438


>gi|222617773|gb|EEE53905.1| hypothetical protein OsJ_00455 [Oryza sativa Japonica Group]
          Length = 588

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 48  NAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  + SR  G      +P+ + + I   +     ++S+ +AG G+IN+ LS +++ + +
Sbjct: 52  NAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRI 111

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++V GI+    ++     V ++F S N    MHVGH R  ++GDTLA +  F+  EV 
Sbjct: 112 QDMLVCGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVL 170

Query: 163 REYYINDAGAQINTLALSVFWRY 185
           R  ++ D G Q   L   +F ++
Sbjct: 171 RRNHVGDWGTQFGMLIEFLFEQF 193



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468
           L    + +G  +V++  L  KN+ L D+ F   +  S K N   Y+QYA+AR  SI R+A
Sbjct: 430 LDRTSEAIGYGAVKYSDL--KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKA 487

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L         I     +   E  L +HL ++  V+E A    +P++L  YLY L
Sbjct: 488 SKDVEKLKMT----GAITLGHPY---ERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSL 540

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +  F   +++          Q         RL L  A   I+    +++G+
Sbjct: 541 SLTFSKFYTN---------CQVVGSPEETSRLLLCEATGIIMRQCFHLLGI 582


>gi|298207765|ref|YP_003715944.1| arginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850403|gb|EAP88271.1| arginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 592

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 122/563 (21%), Positives = 216/563 (38%), Gaps = 100/563 (17%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           S F   KGF+N+ +S  Y       I+ S   +G     +G  V +E+ S N   P+H+G
Sbjct: 73  SAFNVVKGFLNIVISDLYYNAAFQEIL-SEKHFGFKK-AEGDAVMVEYSSPNTNKPLHLG 130

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R  ++G +++ ++  SG  V +   IND G  I    L+ + ++ +      + L   
Sbjct: 131 HIRNNLLGYSVSEILKASGKNVYKTQIINDRGIHICKSMLA-WQKFGKGETPESTGLKGD 189

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEK----WLPIVKDYSVQAMMKI----------- 244
              G Y     KE   + +  + +  EEK      P++ +   QAM+K            
Sbjct: 190 KLVGNYYVRFDKEYKKQVAEIVASGTEEKEAKTQAPLLLE--AQAMLKQWEAGDEDVVNL 247

Query: 245 -----------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                        +    L +  D +  E D +       +DII+    +G  ++     
Sbjct: 248 WKMMNGWVYKGFEETYTNLGVDFDTYYYESDTYLLG----KDIIETGLEKGVFFK----- 298

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADL--AYFKCKYERGFD 350
            K   +  CD+             D +D  L L+SDG+  Y   DL  A  + K      
Sbjct: 299 -KEDGSVWCDLTE-----------DGLDEKLVLRSDGTAVYMTQDLGTAVQRVKDYPDVG 346

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-- 408
            MIY +G++   + K L  +   +    A+    L  L     D    KM  R G  +  
Sbjct: 347 GMIYTVGNEQDYHFKVLFLILQKLGYSWAE---YLYHLSYGMVDLPSGKMKSREGTVVDA 403

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF---- 452
                       TL   + ++   S        K   L    +  +K   K+  +F    
Sbjct: 404 DDLMVDMTQTAKTLSEDLGKLDGYSAEEKEELYKTIGLGALKYYILKVDPKKRILFNPEE 463

Query: 453 ----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                     ++QY YAR +SI R++K +  +      P+++ P+E E       L+  +
Sbjct: 464 SVDFQGNTGPFIQYTYARIQSILRKSK-LDTNAPVAETPKSLHPKEKE-------LLKIM 515

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++P VI+ A     P  +A Y YDL   F+  + +      +  +  ++  L   R+ L
Sbjct: 516 LQFPEVIQQAAQQHSPALIANYTYDLVKEFNSFYQN------VTILGTDDEVLKTFRVAL 569

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              V+ +I    +++G++ P  M
Sbjct: 570 SFKVSELIKDAFSLLGIQVPVRM 592


>gi|298242069|ref|ZP_06965876.1| Arginine--tRNA ligase [Ktedonobacter racemifer DSM 44963]
 gi|297555123|gb|EFH88987.1| Arginine--tRNA ligase [Ktedonobacter racemifer DSM 44963]
          Length = 682

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 57  LGLDPLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG 113
           LG  PL IAE +   I     P++++V     GF+N  L+ + + R I+  ++  G ++G
Sbjct: 65  LGRPPLQIAEALATYINELHVPELENVNATKPGFVNFRLNRAGVGRSIIERVLEEGPDFG 124

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           +N +G   ++ +E  + N     HVGH R + +GDT+  ++   GY V  E YI+D+G Q
Sbjct: 125 QNEVGLNQRIIVEHTAINTNKAAHVGHLRNSCLGDTVVRMLRSQGYHVEAENYIDDSGVQ 184

Query: 174 INTLALSVF 182
           +  + + + 
Sbjct: 185 VADVVVGML 193



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 11/164 (6%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           + + ++R+ M+     +++  D  +V   + +  V Y+QY+YAR  SI R+ +     + 
Sbjct: 525 LAASAIRYFMIRFNLQQIITLDIDEVLRPNGDTGV-YLQYSYARSNSILRRLQASGYTIP 583

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             L   N +P+  + + SE +L+ H+  YPR +  A        LA Y YDLA+     +
Sbjct: 584 TRL---NGLPE--QLEQSEWELLRHIDAYPRRLAEAAEQMSASALAAYAYDLAAHISDFY 638

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            H    P +  V+  N ++   R  LV A    +N+ L I+G E
Sbjct: 639 EH---TPPI--VKEENEQMKAFRALLVQATVQTMNNVLRILGFE 677


>gi|78778575|ref|YP_396687.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|109895016|sp|Q31CZ4|SYR_PROM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78712074|gb|ABB49251.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 604

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 134/602 (22%), Positives = 236/602 (39%), Gaps = 102/602 (16%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAE----LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           G    N  + LS+     P  I+E    L+     I     S+ IAG GFIN+ L    L
Sbjct: 46  GDYQCNVCLCLSKIYKKKPREISEDFVYLLNKNKSISKLCKSLEIAGPGFINIKLKDEVL 105

Query: 99  -RKILSSIVV--SGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +I S+I    +GI   +  +  G   KV ++F S N    MHVGH R  ++GD+++ +
Sbjct: 106 INEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRI 165

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-- 211
               GY+V R  ++ D G Q   L   +     + LY+ND            L+ +GK  
Sbjct: 166 FELRGYQVLRLNHVGDWGTQFGMLITQL-----KDLYSND------------LEEIGKIK 208

Query: 212 --ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             +L + Y +    F  E      +  S + ++K+   D K++     +     D  R +
Sbjct: 209 ISDLVEFYKASKKRFDNESEF---QKRSREEVVKLQSGDSKSIQAWKLLC----DQSRKE 261

Query: 270 PSPI-RDIIDNLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
              I +++   +  +G  +     + ++   K K     D   K +        +    P
Sbjct: 262 FDEIYKNLKIKIKERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLP 321

Query: 324 LL--KSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVAAAVS- 375
           L+  K DG + Y   DLA  + ++ +  +      +IYV     + +   +  VA     
Sbjct: 322 LIVQKKDGGFNYATTDLAAIRYRFNKAPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKW 381

Query: 376 -EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
              K Q++ +   LV+   DG  +K   R G+ I L+ +++E                  
Sbjct: 382 IPDKCQVDHVPFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLEDEDR 438

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        +G  +V++  L +       F F K+   +  N   Y+ Y   R   
Sbjct: 439 YETEEFIANTSRIIGLGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRISG 497

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+   ++   DF       I  E +   SE +LI  L ++  VI +      P +L  
Sbjct: 498 IKRKNDFVYDSEDF-----QYINYEHK---SEWKLIRKLLKFDEVIISIEKDLMPNRLCN 549

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L   F+  +    + P L+      + + + RL L    A  +   L ++G+E+  
Sbjct: 550 YLFELCQTFNRFYD---QVPILK----EEKNIKISRLNLCDLTAKTLKLSLELLGIETLE 602

Query: 584 EM 585
            M
Sbjct: 603 RM 604


>gi|9757672|dbj|BAB08191.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 605

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 48  NAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  + SR  G      +P+ + + I   +     ++S+ +AG G+IN+ LS +++ + +
Sbjct: 64  NAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRI 123

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++V GI+    ++     V ++F S N    MHVGH R  ++GDTLA +  F+  EV 
Sbjct: 124 QDMLVCGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVL 182

Query: 163 REYYINDAGAQINTLALSVFWRY 185
           R  ++ D G Q   L   +F ++
Sbjct: 183 RRNHVGDWGTQFGMLIEFLFEQF 205



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468
           L    + +G  +V++  L  KN+ L D+ F   +  S K N   Y+QYA+AR  SI R+A
Sbjct: 447 LDRTSEAIGYGAVKYSDL--KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKA 504

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L         I     +   E  L +HL ++  V+E A    +P++L  YLY L
Sbjct: 505 SKDVEKLKMT----GAITLGHPY---ERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSL 557

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +  F   +++          Q         RL L  A   I+    +++G+
Sbjct: 558 SLTFSKFYTN---------CQVVGSPEETSRLLLCEATGIIMRQCFHLLGI 599


>gi|225024090|ref|ZP_03713282.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC
           23834]
 gi|224943115|gb|EEG24324.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC
           23834]
          Length = 572

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 124/587 (21%), Positives = 234/587 (39%), Gaps = 80/587 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++   G    N  M  ++    +P  +A+ +   +     + S  +AG GFINL
Sbjct: 25  VVLQPAKNPEFGDFQINGVMGAAKQRKQNPRELAQKVADALANSELIASAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+P +L K + + + S    G         + I++ S N    MHVGH R +++GD+L 
Sbjct: 85  RLNPQFLAKQVHAALQSS-RLGVAQAAAPQTIIIDYSSPNLAKEMHVGHLRSSIIGDSLN 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH--- 208
            + +F G+ V  + ++ D G Q   L   +  +  Q  +   +DL E +Y    ++    
Sbjct: 144 RVHSFLGHRVIAQNHVGDWGTQFGMLVAYLVEQQAQNEHFELADL-EQFYRNAKVRFDED 202

Query: 209 -VGKELADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               + A +Y  +L +  E     W   V + S+Q   K+    L  L  + D  ++ + 
Sbjct: 203 PAFADTAREYVVKLQSGDEAVLALWRQFV-EISLQHAEKVYA-KLGLLLTRED--VAGES 258

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +  D  P   ++++L  +G   E       +K     +   K+        G+     +
Sbjct: 259 KYNDDLQP---VVNDLIAKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAYIV 303

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            K  G + Y   DLA  +    R   N ++YV+      +  +L A         +++  
Sbjct: 304 QKKGGGFLYSTTDLACIRDYVGRLKGNRLLYVVDHRQGLHFGQLFAT--------SRLAG 355

Query: 384 LLCELVRLYRDGMPIKMSK-------RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            L E V+    G    M K       R+GD + L  ++DE    +    ++  KN EL D
Sbjct: 356 YLPENVKAEFIGFGTMMGKDGKPFKTRSGDTVKLVELLDEAVERAT--ALVKEKNPELDD 413

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCR-------SIFRQAKDIFPDLDFDLFP-RNVIPQE 488
               ++        V Y   +  R         ++     +  P L +     ++V+ + 
Sbjct: 414 ATAAQIGRSVGIGAVKYADLSKNRTSDYIFDWDNMLSFEGNTAPYLQYAYTRVQSVLKKA 473

Query: 489 SEFDTSE---------LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            E+  +E          QL   L ++  V++    +  P+ LA YLY +AS+F       
Sbjct: 474 GEWSRTEQPVFTEPLECQLAAELLKFEDVLQTVADSSYPHYLAAYLYQVASLFS------ 527

Query: 540 RENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
                 RF +A         +   RLQL       + +GL+++G+++
Sbjct: 528 ------RFYEACPILKAEGSVRNTRLQLAALTGQTLQTGLSLLGIDT 568


>gi|297838167|ref|XP_002886965.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332806|gb|EFH63224.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 623

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 1/125 (0%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + ++  +     V+S  IAG GF+N+ LS  ++ K + ++++ GI+     +   
Sbjct: 106 PPAVGQALIKNLPSSEMVESCSIAGPGFVNVVLSAKWIAKSIENMLIDGIDTWAPTLSVK 165

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   
Sbjct: 166 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 224

Query: 181 VFWRY 185
           +F ++
Sbjct: 225 LFEKF 229


>gi|297157207|gb|ADI06919.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 332

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 16/201 (7%)

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           CE+     +G  +   + AG  I+   ++  +GSD+ R+ +L     +L D D  ++  Q
Sbjct: 147 CEVA----EGGAVLAVRPAG--ISAEELLGLLGSDASRWALLRAAAHDLPDLDPGRLLAQ 200

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
            + NP+F V+YA++R R++ R   D+  D      P +    +S +D  + + LI  L +
Sbjct: 201 RESNPLFRVRYAHSRVRALLRNGVDLGVD------PDSSRSADSAYDHPTAVALISLLGD 254

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YPR++E+A   + P +LA +L   A  F   +      P L   +         RL L  
Sbjct: 255 YPRLLESAARHRAPDRLARHLEATADAF---FRFHDACPPLPRGEQKPLAAHRSRLALAE 311

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A  +++  GL+++G+ +P  +
Sbjct: 312 AAGTVLAGGLHLLGISAPEHL 332



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIA 84
           +R+ ++ P     G  +TN A+ L++ +  D      L +AE++  R+ + P +  V IA
Sbjct: 21  ERVKVQAPPRAGCGDYATNVALQLAKLVKGDGGPAVALRVAEVLRRRLVVTPGIAGVEIA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           G GF+N+ +       ++  ++  G +YGR+    GT V +
Sbjct: 81  GPGFLNITVDSGGHAALVRGVLERGEDYGRSDALAGTLVRL 121


>gi|123965451|ref|YP_001010532.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123199817|gb|ABM71425.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 602

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 148/644 (22%), Positives = 257/644 (39%), Gaps = 106/644 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKK----ILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           ++ + + R +  L  ++  IK EKK     + + +I +      G    N  ++LS+   
Sbjct: 4   IYQELTKRFEETL--LESLIKNEKKEEFENIRKNLINQASKEEFGDYQCNICLVLSKIYK 61

Query: 59  LDPLTIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIE 111
            +P  IA   V ++K + ++    +++ IAG GFIN+ L  + L  KI S+I    +G+ 
Sbjct: 62  RNPREIAIEFVQKLKENKEISNLCEALEIAGPGFINIKLKNNLLIAKIKSNIKCPRAGVP 121

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
              N      KV ++F S N    MHVGH R  ++GD++A +    GY V R  ++ D G
Sbjct: 122 LSNNNSHSQKKVIVDFSSPNIAKEMHVGHLRSTIIGDSIAKIFELRGYTVLRLNHVGDWG 181

Query: 172 AQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-- 225
            Q   L   +   Y   L   D    SDL E Y           E   +   E++     
Sbjct: 182 TQFGMLITQLKDLYSSDLREIDKITISDLVEFYKASKKRFDNETEFKKRSREEVVKLQSG 241

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDL-KALNIQHDIFISEDDFHRGDP--SP-IRDIIDNLA 281
           ++K +   K    Q+  +   D++ K LNI+    I E    RG+   +P ++ II++L 
Sbjct: 242 DKKSIKAWKLLCNQSRKEF--DEIYKILNIK----IKE----RGESFYNPFLKSIIEDLT 291

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA 339
            +  + E              D   K +        +    PL+  K DG + Y   DLA
Sbjct: 292 FKKILVE--------------DQGAKCVFLHGMTNKEGNPLPLIIKKKDGGFNYATTDLA 337

Query: 340 YFKCKY--ERGFDN---MIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLLCELVRLY 392
             + ++  E   DN   +IYV     S +   +  VA   +   +  ++N +   LV+  
Sbjct: 338 ALRYRFRKEPHGDNATRIIYVTDHGQSNHFAGVFQVAKRANWIPEDCEVNHVPFGLVQGI 397

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSDS 421
            DG  +K   R GD I L+ ++ E                               +G  +
Sbjct: 398 -DGKKLKT--REGDIIKLKDLLSESIKRAKEDLLKRLEKESRFETEEFILNTSKVIGIGA 454

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V++  L +       F F K+   +  N   Y+ Y   R   I R+      +++ D   
Sbjct: 455 VKYADLSQNRITNYQFSFEKMLSLNG-NTAPYLLYTLVRISGINRK-----NNMNEDAVN 508

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    +    E +LI  L ++  VI +      P +L  YL++L   F+  +    +
Sbjct: 509 SESIAYSHDL---EWKLIRKLLKFDEVIVSIEKDLMPNRLCNYLFELCQSFNRFY----D 561

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  V+ N +   + RL L       +   L ++G++S   M
Sbjct: 562 QVSILKVEMNTK---ISRLTLCALTEKTLKLSLELLGIDSLERM 602


>gi|209560234|ref|YP_002286706.1| arginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|229558814|sp|B5XJ77|SYR_STRPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|209541435|gb|ACI62011.1| Arginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 563

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 51/291 (17%)

Query: 323 PLLK-SDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV-------- 370
           PL+K SDG+  +    LA   Y K  Y+  F   +YV+G++ + + K+L+AV        
Sbjct: 296 PLIKKSDGATLHITRALAPALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDW 353

Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                           A +S +K  + +LL   V    +    ++  +  +      V  
Sbjct: 354 SDDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAH 412

Query: 416 EVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            VG  +++F  L        DFD    V  + +  P  YVQYA+AR +SI R+A      
Sbjct: 413 AVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD----- 465

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ 
Sbjct: 466 -----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNK 520

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++H       R +  N+ +    RL L +A A+++   L ++GV++PNEM
Sbjct: 521 YYAH------TRILDDNSERDN--RLVLCYATATVLKEALRLLGVDAPNEM 563



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 4/149 (2%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++   G L+   A  L++ L   P  IA  +  +I  +   + V   G  +IN +
Sbjct: 26  LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L    +  ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKVKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALS 180
           ++ A  GY+  +  ++ D G Q   L ++
Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVA 171


>gi|323651378|gb|ADX97535.1| arginyl-tRNA synthetase [Courdo11 virus]
          Length = 438

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 54/303 (17%)

Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           D+ + PL+  KSDG +TY  +DLA  K ++ E+  D +IYV+ S  S + + +  +A  +
Sbjct: 155 DEFEIPLILVKSDGGFTYDTSDLAAIKYRFMEQKVDRVIYVVDSGQSQHFQMIFKLANQL 214

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           S  K +    +   V L  +G  +K   R+G+ + LR V+ +V   ++      R+N + 
Sbjct: 215 SWCKNEQCYHIGFGVILGNNGKRLK--TRSGETVLLRDVLQQVQDRAILVTKSLRQN-DT 271

Query: 435 LDFDFCKVKE----------------------------QSKENPVFYVQYAYARCRSIFR 466
           L+ D  K+ +                             +K N   Y+ Y  ARC  I R
Sbjct: 272 LEHDISKISKIIANNCIKYSDLNNPRENNYRFDVDKMINTKGNTAAYLMYTLARCHGILR 331

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +  ++   LD D+       + ++ DT  L ++  L +Y   IE +     P+ +  YLY
Sbjct: 332 KISNLSVILDGDI-------EINDADTRCLAIL--LLKYVEFIEKSIKEHAPHYICNYLY 382

Query: 527 DLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +L+      +S+ R    EN  + +V  N       R++L+H    I++    +IG+ES 
Sbjct: 383 ELSVQITKFYSNNRCLEIENGEIIYVYHN-------RIRLIHLAIIIMSKMFELIGLESV 435

Query: 583 NEM 585
            ++
Sbjct: 436 EQI 438


>gi|320035651|gb|EFW17592.1| arginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 714

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 131/605 (21%), Positives = 235/605 (38%), Gaps = 117/605 (19%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  +AE I A+      V+S   AG      + +   +  ++ SI+ +   YG N  
Sbjct: 150 GRKPTDLAEEIAAKFPQSDLVESPKAAGTHLQFHFRAQPLIHTVIPSILENKATYGTNAN 209

Query: 117 IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           IG        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y+
Sbjct: 210 IGLRDPRDPSKGKKRIVVEFSSPNIAKPFHAGHLRSTIIGGFLANLYRIMGWDVIKMNYL 269

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNF 224
            D G Q   LA          +Y N+ +L   P  +   VY+K + K++ ++    +   
Sbjct: 270 GDWGKQYGLLANGY------KMYGNEEELLKDPINHLFEVYVK-INKDVGEQ-EGPIKEL 321

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--DLKALNIQHDIFISEDDFHRGDPSPI------RDI 276
            E+  L   K   V A+ K +    D          F S +D   GD   +      RD+
Sbjct: 322 KEQIKLKKEKGEDVAALEKELETLVDASWDEKARRYFKSMED---GDEDALALWRRFRDL 378

Query: 277 IDNLARQGY--------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--- 325
                +Q Y        VY G     +S+  Q+  + +     +   V +D +  ++   
Sbjct: 379 SIEKYKQTYARLNIDFDVYSG-----ESQVKQES-LSKVYQTMQEKGVSEDSEGAIIVDF 432

Query: 326 --------------KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                         + DG+  Y   D+ A F+      FD M+YV+ +    ++ +L   
Sbjct: 433 TKHGAKKLGKAIVVRKDGTPLYLTRDIAAIFERDETFHFDKMLYVVAAQQDLHLAQLFKT 492

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSV 422
              +  K       L E  +    GM   MS R G    L  ++ +VG         ++V
Sbjct: 493 VELMGRKD------LAERCQHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMKKNAV 546

Query: 423 RFMMLWR--KNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463
           ++  +    + ++ L      V++ S +                 +   Y+QYA+AR  S
Sbjct: 547 KYEQVQNPDETADTLGITSVMVQDMSGKRINGYEFNLEDMTSFEGDTGPYLQYAHARLCS 606

Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           + R+A+    +    D  L            ++  + L+  L+++P V+ N+    EP  
Sbjct: 607 VNRKAEIDPSVLGSADLSLLT----------ESHAVDLVRLLSQWPDVVLNSMKTLEPTT 656

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ +        S G +  +   V  +  +L   R+ L H    ++N+G+ ++G+ 
Sbjct: 657 IITYLFRMTHTL----SSGYDTLK---VVGSEPELKKARMALYHCARQVLNNGMRLLGLN 709

Query: 581 SPNEM 585
               M
Sbjct: 710 PVERM 714


>gi|119190465|ref|XP_001245839.1| arginyl-tRNA synthetase [Coccidioides immitis RS]
 gi|303315135|ref|XP_003067575.1| arginyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240107245|gb|EER25430.1| arginyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 647

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 131/605 (21%), Positives = 235/605 (38%), Gaps = 117/605 (19%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  +AE I A+      V+S   AG      + +   +  ++ SI+ +   YG N  
Sbjct: 83  GRKPTDLAEEIAAKFPQSDLVESPKAAGTHLQFHFRAQPLIHTVIPSILENKATYGTNAN 142

Query: 117 IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           IG        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y+
Sbjct: 143 IGLRDPRDPSKGKKRIVVEFSSPNIAKPFHAGHLRSTIIGGFLANLYRIMGWDVIKMNYL 202

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNF 224
            D G Q   LA          +Y N+ +L   P  +   VY+K + K++ ++    +   
Sbjct: 203 GDWGKQYGLLANGY------KMYGNEEELLKDPINHLFEVYVK-INKDVGEQ-EGPIKEL 254

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--DLKALNIQHDIFISEDDFHRGDPSPI------RDI 276
            E+  L   K   V A+ K +    D          F S +D   GD   +      RD+
Sbjct: 255 KEQIKLKKEKGEDVAALEKELETLVDASWDEKARRYFKSMED---GDEDALALWRRFRDL 311

Query: 277 IDNLARQGY--------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--- 325
                +Q Y        VY G     +S+  Q+  + +     +   V +D +  ++   
Sbjct: 312 SIEKYKQTYARLNIDFDVYSG-----ESQVKQES-LSKVYQTMQEEGVSEDSEGAIIVDF 365

Query: 326 --------------KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
                         + DG+  Y   D+ A F+      FD M+YV+ +    ++ +L   
Sbjct: 366 TKHGAKKLGKAIVVRKDGTPLYLTRDIAAIFERDETFHFDKMLYVVAAQQDLHLAQLFKT 425

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSV 422
              +  K       L E  +    GM   MS R G    L  ++ +VG         ++V
Sbjct: 426 VELMGRKD------LAERCQHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMKKNAV 479

Query: 423 RFMMLWR--KNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463
           ++  +    + ++ L      V++ S +                 +   Y+QYA+AR  S
Sbjct: 480 KYEQVQNPDETADTLGITSVMVQDMSGKRINGYEFNLEDMTSFEGDTGPYLQYAHARLCS 539

Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           + R+A+    +    D  L            ++  + L+  L+++P V+ N+    EP  
Sbjct: 540 VNRKAEIDPSVLGSADLSLLT----------ESHAVDLVRLLSQWPDVVLNSMKTLEPTT 589

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ +        S G +  +   V  +  +L   R+ L H    ++N+G+ ++G+ 
Sbjct: 590 IITYLFRMTHTL----SSGYDTLK---VVGSEPELKKARMALYHCARQVLNNGMRLLGLN 642

Query: 581 SPNEM 585
               M
Sbjct: 643 PVERM 647


>gi|160893430|ref|ZP_02074215.1| hypothetical protein CLOL250_00980 [Clostridium sp. L2-50]
 gi|156864825|gb|EDO58256.1| hypothetical protein CLOL250_00980 [Clostridium sp. L2-50]
          Length = 563

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 110/505 (21%), Positives = 206/505 (40%), Gaps = 72/505 (14%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G +  G    + I++ S N     HVGH R  ++G++L  + +  GY+V R  ++ D G
Sbjct: 100 FGGSDEGADKVICIDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYKVIRINHLGDWG 159

Query: 172 AQINTLALSV-FWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEE 227
            Q   L ++   W  ++A+  +  ++L   Y           EL D+  +    +   +E
Sbjct: 160 TQFGKLIVAYKNWGTKEAVEKDGVAELMRLYVKFHEEADKNPELVDEARAWFSKMEHGDE 219

Query: 228 KWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           + L I + +   ++++  R  DL  L +  D ++ E  F+R      +D++D L     +
Sbjct: 220 EALSIWQWFKDISLVEYKRTYDL--LGMDFDYYLGES-FYR---DKCQDVVDQLTNANLL 273

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKY 345
            E       +      D D    +             + K DGS  Y   DLA  F  K 
Sbjct: 274 KES----EGAMIVDLSDYDMAPCI-------------VTKKDGSSIYATRDLAAIFYRKN 316

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              F   +YV G +   +  ++  V   +    A+ +++      +  +G   K+S R+G
Sbjct: 317 TYHFTKCLYVTGQEQKLHFAQVFKVVELLGNDWAKDSLVHIPYGLVSLEGA--KLSTRSG 374

Query: 406 DFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           + I    ++ +                         VG  SV F  L+ +  + + F + 
Sbjct: 375 NIIYAEDILHDAIKKSFEIISEKSPNLPDKEEVAKIVGVGSVLFNDLYNQRIKDVSFSWD 434

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           KV     E    YVQY +ARC S+ R A++      FD  P   +   +  +   + L+ 
Sbjct: 435 KVLNFDGETGP-YVQYTHARCSSVVRLAEN------FD--PAKPVDYSTISEPDAMNLLK 485

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +  +P+V+ +A    EP  +A +  D+A  F+  ++  R N     V   N K    R+
Sbjct: 486 EINRFPKVVSDAAEKYEPSVVARFAVDVAQAFNKFYNSTRIN-----VPEENVK--NARV 538

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L +     ++  L+++G+ +P  M
Sbjct: 539 MLTYLTKKTLHDALDLLGINAPEAM 563


>gi|291396590|ref|XP_002714514.1| PREDICTED: arginyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 625

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 137/608 (22%), Positives = 258/608 (42%), Gaps = 117/608 (19%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           K +  + + R  + A   LS ++ +  +     D    A+ +  ++K D  V  +   G+
Sbjct: 74  KSISAVPVSRKEEVADFQLSLDSLLANNNHSSSDIQVQAKRLAEKLKCDTVVSEI-STGR 132

Query: 87  GFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKGT---KVNIEFVSANPTGPMHVGHC 141
           G +N  ++   L K +L  ++  G +YG ++ +  G    K+ +EF S N     HVGH 
Sbjct: 133 GTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGVPQKKIVVEFSSPNIAKKFHVGHL 192

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGY 200
           R  ++G+ +A+L    G++VTR  Y+ D G Q   L      + Y++ L +N    P  +
Sbjct: 193 RSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQH 248

Query: 201 YPGVYLKHVGKELAD-----KYSSELLNFPE-------EKWLPIVKDYSVQAMMKIIRDD 248
              +Y++ V KE AD     K + E     E         W    +D S++  ++I    
Sbjct: 249 LFEIYVQ-VNKEAADDKSVAKSAQEFFQRLELGDAQAFSLWQKF-RDLSIEEYIRI---- 302

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K L++  D + S + F+R     I  ++D+        +G+L     K T   D+    
Sbjct: 303 YKRLDVYFDEY-SGESFYREKSREILKLLDS--------KGLLKKT-VKGTAVVDL---- 348

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV------------ 355
               S          +++SDG+  Y   DLA    + ++  FD MIYV            
Sbjct: 349 ----SGNSDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQV 404

Query: 356 ------MGSDHSGYVKRLE----AVAAAVSEKKAQINVL---LCEL-VRLYRDGMPIKMS 401
                 MG D   +V+R +     V   +  ++  +  L   L E+ +R+ ++   IK +
Sbjct: 405 FQMLKIMGYD---WVERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTT 461

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYAR 460
           K+  +    +   ++VG  ++       + + L D+ F   +  QS+ +   ++QY +AR
Sbjct: 462 KKLEN---PQETAEKVGLAALIIQDF--RGALLSDYQFSWDRIFQSRGDTGVFLQYTHAR 516

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIENATI 514
             S+         +  F     N      +F+T+ LQ      ++ HL  +  V+  ++ 
Sbjct: 517 LHSL---------EETFGCGYLN------DFNTACLQEPQSVSILQHLLRFDEVLYRSSQ 561

Query: 515 AQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
             +P  +  YL     LA+V H    H +++P          ++   RL L  AV S++ 
Sbjct: 562 DLQPRHIVSYLLTLSHLAAVAHKTL-HIKDSP---------PEVAGARLHLFKAVRSVLA 611

Query: 572 SGLNIIGV 579
           +G+ ++G+
Sbjct: 612 NGMKLLGI 619


>gi|242020388|ref|XP_002430637.1| predicted protein [Pediculus humanus corporis]
 gi|212515809|gb|EEB17899.1| predicted protein [Pediculus humanus corporis]
          Length = 569

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 103/501 (20%), Positives = 194/501 (38%), Gaps = 84/501 (16%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV +E+ S N   P HVGH R  ++G+++A++    G  V +  Y+ D G Q   + L
Sbjct: 118 GKKVIVEYSSPNIAKPFHVGHLRSTIIGNSIANIKKKLGNNVFKLNYLGDWGTQFGIIQL 177

Query: 180 SVFWRYQQALYNNDSDLP-----EGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLPI 232
            V   ++    ++    P     + Y  G  L  + ++  +K      LL   +EK + +
Sbjct: 178 GV--EHENYTIDDIKKDPINLLFKAYVKGNQLSKLDQDAYEKAKKNFYLLERQDEKLIQL 235

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              Y +  + ++     K L ++ D F  E D+ R     +  +++         +GIL 
Sbjct: 236 WDKYRMWTLEEL-NATYKRLGVEFDSFSWESDYRRSHADNVLKLLEE--------KGILS 286

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDN 351
             + +              +   V DD   PL+KSD +  Y   DL A         FD 
Sbjct: 287 TDEFQ--------------KKVAVIDDKVIPLIKSDNTTLYICRDLMAVLDRISTHNFDE 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           M YV+ +  + +   L  +   +   K +I       +R  + G    M  R G+ I L+
Sbjct: 333 MYYVVDNGQAEHFTNLFKLCEKLEISKNKI-------LRQIKFGKINGMKTRKGNVIFLK 385

Query: 412 HVVDEV---------GSDSVRFMMLWRKNSELL--------DFDFCKVKE---------Q 445
            V+DE           + + +     R+ +++L        D    + K+         Q
Sbjct: 386 DVIDEARERVLAKQQSTKTTKTSADDRETADVLGVSAVIINDLKRSRTKDYAAKWEDMLQ 445

Query: 446 SKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
              +   ++QY + R C       K +    D         PQ  + +   + LI  +A 
Sbjct: 446 MTSDTGVFLQYCHCRLCNLSLECGKTMASYCD---------PQALK-EIEAINLIKQIAN 495

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           Y  ++  +    +P +L  YL+ L    +G   +         V++++      RL L  
Sbjct: 496 YESILIKSNETLQPKELVSYLFALCRATNGALKNLN-------VKSSDDHTGSQRLLLFE 548

Query: 565 AVASIINSGLNIIGVESPNEM 585
              S++  G+ ++G++   +M
Sbjct: 549 KTRSVLEDGMKLLGLKPLRKM 569


>gi|305665103|ref|YP_003861390.1| arginyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88709855|gb|EAR02087.1| arginyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 595

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 120/560 (21%), Positives = 225/560 (40%), Gaps = 91/560 (16%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           S F   KGF+N+ +S S+  +   SI  +    Y  N  GK   V +E+ S N   P+H+
Sbjct: 73  SGFNVVKGFLNIVISDSHYIEFFKSIKKIKNFGYRAN-AGK-EAVMVEYSSPNTNKPLHL 130

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSD 195
           GH R  ++G ++A ++  +G +V +   IND G  I  + LA   F + +         D
Sbjct: 131 GHIRNNLLGYSVAEILKAAGKKVYKTQIINDRGIHICKSMLAWQKFGKGETPQNTGLKGD 190

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV------------KDYSVQAMMK 243
              G Y   + K    E+ +  S  +     EK  PI+             D  V  + K
Sbjct: 191 KLVGNYYVAFDKAYKAEIEEMVSKGVEKKQAEKEAPILLEAQSMLRKWEASDDEVVGLWK 250

Query: 244 IIR--------DDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +         +  K L +  D ++   D +  G     +D++ +   +G  Y+      
Sbjct: 251 TMNGWVYKGFDETYKNLGVDFDKLYYESDTYLLG-----KDVVASGLEKGVFYK------ 299

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNM 352
           K   +   D+  + L           ++ +L+SDG+  Y   D+  A  + K       M
Sbjct: 300 KEDGSVWIDLTDEGL----------DEKIVLRSDGTAVYMTQDIGTAIQRVKDYSDITGM 349

Query: 353 IYVMGSDHSGYVKRL----EAVAAAVSEKKAQINVLLCEL----------VRLYRDGMPI 398
           +Y +G++   + K L    + +    +E+   ++  + +L            +  D + I
Sbjct: 350 VYTVGNEQDYHFKVLFLILKKLGFTWAERLHHLSYGMVDLPSGKMKSREGTVVDADDLMI 409

Query: 399 KMSKRAGDFITLRHVVDE------------VGSDSVRFMMLWRKNSELLDFDFCK-VKEQ 445
            MS+ A         +D+            +G  ++++ +L     + + FD  + V  Q
Sbjct: 410 DMSETAAKISEELGKLDDYSVTEKQGLFKMIGLGALKYYILKVDPKKRILFDPEESVDFQ 469

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
               P  ++QY YAR +SI R+  +I    D ++ P        E  + E +L+  +  +
Sbjct: 470 GNTGP--FIQYTYARIQSILRKGDEIANVWDSEVEPA------MELHSKEKELLKQVQAF 521

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  I+ A     P  +A Y YDL   F+  +       ++  +  +  +  + R+QL   
Sbjct: 522 PETIQLAAENYSPALIANYTYDLVKEFNSFYQ------QVSILGESVEQKKVFRVQLSKK 575

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  +I S   ++G++ P  M
Sbjct: 576 VGEVIQSAFLLLGIQVPERM 595


>gi|290988574|ref|XP_002676976.1| predicted protein [Naegleria gruberi]
 gi|284090581|gb|EFC44232.1| predicted protein [Naegleria gruberi]
          Length = 536

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 128/581 (22%), Positives = 231/581 (39%), Gaps = 110/581 (18%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           +A+ I   +K   DV      G+G ++N +  P++L K +  +        R    K   
Sbjct: 7   LAKEISRIVKEKTDVVVENCVGEGPYVNFFYQPAHLGKAIEEVHNGNFLSVRE--SKNEN 64

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IE+   N     HVGH R A +G++L  L  + GY V    YI D   +   ++   F
Sbjct: 65  VMIEYSQPNTHKTFHVGHMRNAALGNSLVLLYEWCGYNVHAVNYIGDVVDKQGVISQG-F 123

Query: 183 WRYQQALYNNDSDLPEGYYP-----GVYLKHVGKELADKYSSELLNFPEE---------K 228
              Q  L ++++      +P     G+ L  +G++ AD      +N  +E          
Sbjct: 124 ILSQAELGSSENKEKIHIFPADSPVGIELTELGRK-ADCNVDASINIGQEFKKRESQCKT 182

Query: 229 WLPIVKDY--SVQAMMKIIR----DDLKAL----NIQHDIFISEDDFHRGDPSPIRDIID 278
            L  ++D+  ++  + +I R    +D K++    + + D F  E D   GD S  ++I+ 
Sbjct: 183 LLRAMEDHKKNISMLWEITRTWSIEDFKSIYKWSDCRFDHFFHESDV--GDES--KEIVL 238

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR----PLLKSDGSYTYF 334
               +G                       +L+     +G D+ +     LL S G+  Y 
Sbjct: 239 KAYEEG-----------------------KLIKSDGAIGADLGKLGFCVLLTSAGTGLYA 275

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             DLA  K K+E    D  +YV+    S + +++      +  ++A+    L   + +  
Sbjct: 276 TKDLALAKRKFEEFKVDRSVYVVDVSQSLHFQQVFKTLEVLGFEQAKKCKHLAYGMVVLP 335

Query: 394 DGMPIKMSKRAGDFI----------------------------TLRHVVDEVGSDSVRFM 425
           DG   KMS R G+ I                             +     ++   ++++ 
Sbjct: 336 DG---KMSSRKGNIIYFSTLQKSLTQNITDNFMSKYEGEWPKEEIEETTRKIAISAIKYG 392

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNV 484
           ML + N++ + F   +   +S  N   Y+ YAYAR  S+  +   D    +D+ L     
Sbjct: 393 MLNQDNNKDITFVLKEWASKSG-NTGPYLMYAYARAVSVVNKIGLDSSVTIDYSLLT--- 448

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E +L+  + +Y  V+E A    +P  L  +LY+L       +S   E   
Sbjct: 449 -------DETERKLLSTILQYSIVVERAAEQYKPQLLCIFLYNLCK----QYSKMYEAVS 497

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +R   A   +L   RL+LV   A ++  GL ++G+ +   M
Sbjct: 498 IR--DAATPELKQTRLRLVAGFAKVLKHGLGLLGISTAERM 536


>gi|114570763|ref|YP_757443.1| arginyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315492|sp|Q0AMI8|SYR_MARMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114341225|gb|ABI66505.1| arginyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 588

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 216/542 (39%), Gaps = 90/542 (16%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N AM  ++    +P  +A  ++  +   P + +  IAG GFINL  +  +L    ++ + 
Sbjct: 43  NGAMPAAKQAKTNPRELAAKLIEALHGIPQIGAAEIAGPGFINLRPA-EHLYGERAAEIA 101

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                G  L      V I+F   N   PMHVGH R +V+GD+L  L  F G  V  + ++
Sbjct: 102 GDDRAGAPLAAAPRTVMIDFGGPNVAKPMHVGHLRSSVLGDSLQRLFRFRGDTVVSDIHL 161

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGY--------------YPGVYLK-HVGKE 212
            D G Q+  L ++     Q  L   D+ + +GY              YP   +K   G E
Sbjct: 162 GDWGLQMGHL-ITELHEEQPDLVYFDAAITDGYPSEPPVTIEDLARLYPQASVKAKAGPE 220

Query: 213 LAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             +  + ++  L      +  +++ + +   +  ++ D  AL +  D++  E D    DP
Sbjct: 221 RLEISRSATAELQAGRPGYRALLRHF-IDVSVAALKRDFGALGVHFDLWKGESDV---DP 276

Query: 271 SPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             I  ++++   +G     EG L    ++     D D+K+L   + ++       L+   
Sbjct: 277 L-IPGLVEDFKARGVAEESEGALIVRVAR-----DGDKKEL---APLI-------LVSKT 320

Query: 329 GSYTYFAADLAY-FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSE------KK 378
           G+  Y   DLA     K     D  +YV+     DH   V R    A    E      K 
Sbjct: 321 GAALYGTTDLATILDRKQSVDPDLTLYVVDLAQGDHFEQVFRAAEKAGLAEEGALEHVKF 380

Query: 379 AQINVLLCELVRLYRDGMPIKMS--------------KRAG---DFITLRH--VVDEVGS 419
             +N    + +R  RDG   +++              K AG   D     H  V   VG 
Sbjct: 381 GTVNGTDGKRLR-TRDGGTFRLADLIASAIERADERLKEAGLAADVSAEEHARVARMVGL 439

Query: 420 DSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +++F  L  +R  + + D D F     + K  P  Y+ YA  R +S+ R+A +      
Sbjct: 440 AAIKFADLQNYRTTNYVFDLDRFTSF--EGKTGP--YLLYAAVRVKSLMRRAAEA----- 490

Query: 477 FDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                  V P E   D  E + L++ L  +   ++NA   + P  L  + + LA  F   
Sbjct: 491 ------GVTPGEILVDAQEERDLVLCLDAFGAALDNAADNRAPNALCDHAFTLAQAFSKF 544

Query: 536 WS 537
           +S
Sbjct: 545 YS 546


>gi|58269318|ref|XP_571815.1| arginine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134114239|ref|XP_774367.1| hypothetical protein CNBG3480 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257002|gb|EAL19720.1| hypothetical protein CNBG3480 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228051|gb|AAW44508.1| arginine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 622

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 191/484 (39%), Gaps = 102/484 (21%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           + YG    G G  + ++F S N   P H GH R  ++G  + +L   +G++VTR  Y+ D
Sbjct: 142 LAYGTTTEGAGKHLVVDFSSPNIAKPFHAGHLRSTIIGAVICNLHEANGWKVTRLNYLGD 201

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK------------HVGKELA 214
            G Q   L++          Y N+ +L   P  +   VY+K              G+ + 
Sbjct: 202 WGTQYGLLSVGF------DKYGNEEELVKDPIHHLFQVYVKINNARDEQKKKFEAGETIP 255

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR-DDL---------KALNIQHDIFISEDD 264
           D+ +  LL    +K    ++D   +A+ +  R  DL         K LN+  D++  E  
Sbjct: 256 DEENIHLL---AKKVFKDMEDGEPKAIAQWARFRDLSIEKLKGTYKKLNVHFDVYWGESQ 312

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                        +++ R   + +        +    C+ DR  LL   T     +D+ +
Sbjct: 313 VSE----------ESMERAVRIVQ--------EKNLTCE-DRGALLVDLTKF--KMDKAI 351

Query: 325 L-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS---------------GYVKRL 367
           + K DG+  Y   DL     KY++  FD  IYV+ +  +                Y  +L
Sbjct: 352 VRKGDGTSIYLTRDLGGAYDKYQKYKFDKHIYVVQAAQTLHFNQLFKTLELMGEPYADKL 411

Query: 368 EAVA----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSD 420
           E V       +S +K  + V L +++    D M  +M      +  +         +G+ 
Sbjct: 412 EHVTFGLVKGMSTRKGTV-VFLEDIIAEATDVMHEQMKSNEAKYAQVEDPEGTSAIIGTT 470

Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +V+   +  +     DFD  +    +    P  ++QY++ R  S+ R+            
Sbjct: 471 AVKIQDMAGRRINDYDFDIKRCTSFEGDFGP--FIQYSHVRLCSVQRKN----------- 517

Query: 480 FPRNVIPQE-SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            P  ++PQ  +E D S L       +I+HLA YP  + NA +  EP +L  + + L  + 
Sbjct: 518 -PNVLVPQSINEIDLSILNEPKVNDIIMHLALYPTHVRNAFLQSEPSQLVTWCFKLGHLV 576

Query: 533 HGHW 536
              W
Sbjct: 577 GAAW 580


>gi|194216244|ref|XP_001500381.2| PREDICTED: similar to Probable arginyl-tRNA synthetase,
           mitochondrial precursor (Arginine--tRNA ligase) (ArgRS)
           (Arginyl-tRNA synthetase-like) [Equus caballus]
          Length = 578

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 130/576 (22%), Positives = 235/576 (40%), Gaps = 110/576 (19%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A  +  ++K D  V  +   G+G +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DMQVQATRLAEKLKCDTVVSEI-STGQGTVNFKINRELLTKTVLQQVIEDGPKY 112

Query: 113 G------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
           G       +L  K  K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y
Sbjct: 113 GLKSELFSDLPQK--KIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINY 170

Query: 167 INDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS------ 219
           + D G Q   L      + Y++ L +N    P  +   VY++ V KE AD  S       
Sbjct: 171 LGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKSARE 225

Query: 220 --ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             + L   + + L +    +D S++  ++I     K L +  D + S + F+R     + 
Sbjct: 226 FFQRLELGDMQALALWQKFRDLSIEEYVRIY----KRLGVHFDEY-SGESFYREKSQEVL 280

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTY 333
            ++D+   +G + + I      K T   D+            GD      +++SDG+  Y
Sbjct: 281 KLLDS---KGLLQKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLY 322

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V   
Sbjct: 323 ATRDLAAAIDRMDKYHFDRMIYVTDKGQKKHFQQVFQLLQIMGYDWAE----RCQHVPF- 377

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------L 435
             G+   M  R GD   L  V++E+    ++ M   +   EL                  
Sbjct: 378 --GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELENPQETAERVGLAALIIQ 435

Query: 436 DFDFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           DF    + +         QS+ +   ++QY +AR  S+         +  F     N   
Sbjct: 436 DFKGLLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLNDCN 486

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENP 543
                +   + ++ HL  +  V+  ++   +P  +  YL     LA+V H    H +++P
Sbjct: 487 TACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAHKTL-HVKDSP 545

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                     ++   RL L  AV S++ +G+ ++G+
Sbjct: 546 ---------PEVAGARLHLFRAVRSVLANGMKLLGI 572


>gi|239980243|ref|ZP_04702767.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452098|ref|ZP_06591488.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355047|gb|EFE81949.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 599

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
            N  + L++ L  +P  +A  +V  I  D  +  + ++G GF+NL LS + + + L++  
Sbjct: 43  ANGILALAKKLKGNPRELATKVVDAIGADEVIQDIEVSGPGFLNLTLSDAAITRNLAARA 102

Query: 107 VSGIEYGRNLI-GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
                 G  L    GT V I++   N    MHVGH R AV+GD +  ++ F+G +V R +
Sbjct: 103 ADPARLGVPLAEAPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVRMLEFTGEQVVRRH 161

Query: 166 YINDAGAQINTL 177
           +I D G Q   L
Sbjct: 162 HIGDWGTQFGML 173



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 53/297 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSDG + Y A DL+  + + ++   D ++YV+ +  S + K +   A        
Sbjct: 322 PLIVQKSDGGFGYAATDLSAIRDRVFQLKADTLLYVVDARQSLHFKMVFETARRAGWLGE 381

Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +  V L     L +DG P K   R G+ + L  ++DE                      
Sbjct: 382 DVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVERATAVVREKDVKEQLTEEQ 439

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR RSI R+A 
Sbjct: 440 IAERGAEVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRRAG 498

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +  P          V   E     +E  L +HL ++  +  +A     P+KLA YLY  A
Sbjct: 499 EARP----------VAHPELALAPAERALGLHLDQFGEIASDAAAEYAPHKLAAYLYQTA 548

Query: 530 SVFHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S++   +       +   + A+N  +L   RL L       ++ G+ ++G+ +P ++
Sbjct: 549 SLYTTFYD------QCHVLSADNPPELVENRLFLCDLTGRTLHQGMELLGIRTPEQL 599


>gi|159116602|ref|XP_001708522.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157436634|gb|EDO80848.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 621

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 116/505 (22%), Positives = 206/505 (40%), Gaps = 72/505 (14%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT----KVNIEFVSANPT 133
           +++V IAG  FIN+ L+P+YL      I ++ + +G  L    T    +V ++F S N  
Sbjct: 105 IEAVNIAG-CFINIALTPAYLLSKCFDIYMA-VPFG-TLPKPPTLPRKRVVVDFSSPNVA 161

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
             MHVGH R  ++GD++  L  + GY+V R  ++ D G Q   L   +            
Sbjct: 162 KSMHVGHLRSTIIGDSICRLYEYVGYDVHRINHVGDWGTQFGMLITHL------------ 209

Query: 194 SDL-PEGYYPGVYLKHVG----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +D+ PE      + + +       L   Y +    F  +   P  +  + +A++K+ R +
Sbjct: 210 TDMHPEIADAAAHCRRITMLPIDNLVAFYKAAKERFDND---PAFQKRAYEAVVKLQRLN 266

Query: 249 LKALNIQHDIF-ISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           L    +   I  IS  +F R  D   I+  ID      Y ++      + K      M  
Sbjct: 267 LAEFYLWCKICDISRHEFQRIYDRLDIK--IDEFGESSYKFKLGTTVARLKRLHLTQMSD 324

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYV 364
           K  +    + G D    ++KSDG +TY   D+A  Y + +     D  +YV+ +  S + 
Sbjct: 325 KATVI--PIEGMDYPLIIVKSDGGFTYDTTDMAAIYHRTQVLHA-DKCVYVVDAGQSSHF 381

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             +   A           V +   V L  DG  +K   RAG+ + L  ++DE  ++S+R 
Sbjct: 382 DLVFKAAEKAGWITKDQAVHVPFGVVLGSDGKRLK--TRAGETVKLEDLLDEAVTESMRL 439

Query: 425 MMLWRKNSELLDFDFCKVKEQS----------------------------KENPVFYVQY 456
           +    ++ E    +  +V E                              K N   Y+ Y
Sbjct: 440 LEERNRDQEFSQEEMRQVAEAVGYGAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLY 499

Query: 457 AYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           ++ R  SI R+A      +D  +L+  + +   S  + SE+ L+V L +    I      
Sbjct: 500 SFTRISSICRKA-----GIDREELYTSDTLRNLSITEPSEINLLVALLKVRDTILFTLED 554

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGR 540
             P+++  ++Y +AS +   +   R
Sbjct: 555 LCPHRICDWVYSVASAYTDFYEKCR 579


>gi|54290192|dbj|BAD61080.1| putative arginyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 631

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 48  NAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           NA  + SR  G      +P+ + + I   +     ++S+ +AG G+IN+ LS +++ + +
Sbjct: 16  NAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRI 75

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             ++V GI+    ++     V ++F S N    MHVGH R  ++GDTLA +  F+  EV 
Sbjct: 76  QDMLVCGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVL 134

Query: 163 REYYINDAGAQINTLALSVFWRY 185
           R  ++ D G Q   L   +F ++
Sbjct: 135 RRNHVGDWGTQFGMLIEFLFEQF 157



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468
           L    + +G  +V++  L  KN+ L D+ F   +  S K N   Y+QYA+AR  SI R+A
Sbjct: 394 LDRTSEAIGYGAVKYSDL--KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKA 451

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L         I     +   E  L +HL ++  V+E A    +P++L  YLY L
Sbjct: 452 SKDVEKLKMT----GAITLGHPY---ERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSL 504

Query: 529 ASVFHGHWSHGR--ENPRLRFV 548
           +  F   +++ +  ENP+L F+
Sbjct: 505 SLTFSKFYTNCQVLENPKLGFL 526


>gi|221061383|ref|XP_002262261.1| arginyl-trna synthetase [Plasmodium knowlesi strain H]
 gi|193811411|emb|CAQ42139.1| arginyl-trna synthetase, putative [Plasmodium knowlesi strain H]
          Length = 588

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 140/611 (22%), Positives = 249/611 (40%), Gaps = 135/611 (22%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           GH   N A  + +  G +        +++LI+  I  +   + +  + +GFI + LS  Y
Sbjct: 37  GHFQCNNAFNIFKKYGKELNVENAQKLSQLIIENIS-ENFFEEIKSSPQGFITVKLSKQY 95

Query: 98  LRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           + K L           S+ +  ++ G +  G   +V ++F S N    MHVGH R  ++G
Sbjct: 96  IEKSLLKLYKNNKIEISVNIDEVKSGND--GDYKRVLVDFSSPNIAKEMHVGHLRSTILG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVY 205
           D++ ++  F   +  R  +I D G Q   +   +   Y     N    ++L   Y     
Sbjct: 154 DSICNIFEFLNVQTIRVNHIGDWGTQFGMIINYIVTNYPNFKENMPELTNLTSLYQEAKK 213

Query: 206 LKHVGKEL---ADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +  V KE    +  Y+ +L N  E+    W  I +  S +   KI     K L+I+ D +
Sbjct: 214 IYDVDKEFEKNSKNYAIKLQNNDEDSLFIWKKICES-SKKEFNKI----YKILDIKLD-Y 267

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           + E  +    PS ++ + D                            ++LL   T VGD 
Sbjct: 268 VGESHYINMIPSTLKILKD----------------------------QELL---TNVGDA 296

Query: 320 V-------DRPLL--KSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +         PL   KS+G Y Y + D+A  +++ K E   D +IYV  +    + + + 
Sbjct: 297 ICYHSENFKVPLFLQKSNGGYGYDSTDVAALHYRLK-ELNADCVIYVTDNGQLSHFETIF 355

Query: 369 AV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
            V   A   +EK   I+V       L  +    K   R+G  I L ++++E G++  +  
Sbjct: 356 EVARRAQWANEKTKLIHVGF----GLVLNADNKKFKTRSGTTIKLINLINE-GTERAKKD 410

Query: 426 MLWR---KNSELLDF----DFCKVKEQ----------------------------SKENP 450
           +L R   K+ E + +    D  K+ E+                             K N 
Sbjct: 411 LLERIQLKSEEEISYFEGVDIDKLSEELCVSAIKYFDIKQNRNTDYKFSYDNMLNVKGNT 470

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY+R  SIFR+      ++D D   ++ +   S +   E+ L +H+ ++P V  
Sbjct: 471 GLYIIYAYSRMCSIFRKC-----NIDMDQLSKDELNLVSPY---EVNLGLHILKFPDVFY 522

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                   +KLA Y YDL ++F   +    EN ++  + + N K    RL L     S++
Sbjct: 523 FILKNMLIHKLAEYTYDLTTIFTAFY----ENCKV--INSENEK---SRLILCAISKSLL 573

Query: 571 NSGLNIIGVES 581
              L ++G+++
Sbjct: 574 QICLKLLGLKA 584


>gi|307331363|ref|ZP_07610483.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306882986|gb|EFN14052.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 595

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 50/296 (16%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSDG + Y A DL+  + + +    D ++YV+ +  S + K +   A  +     
Sbjct: 317 PLIVQKSDGGFGYAATDLSAIRDRVQHLKADTLLYVVDARQSLHFKMVFETARRIGWLND 376

Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           Q++ V L     L +DG P K   RAG+ + L  ++DE                      
Sbjct: 377 QVHAVQLAFGTVLGKDGKPFKT--RAGETVRLEDLLDEATERAAAVVREKSEKLGLTEED 434

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  +G  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A+
Sbjct: 435 ILERGAQLGVGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRRAE 493

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +           R V   E     +E  L +HL ++   +       EP+KLA YLY LA
Sbjct: 494 E---------GQRTVAHPELPLTKAERALGLHLDQFGETLGEVAAGFEPHKLAGYLYQLA 544

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S++   +    + P L+     ++     RL L    A  +  G+ ++G+ +P  +
Sbjct: 545 SLYTTFYD---QCPVLKAEGGPSQ--VENRLFLCDITARTLRQGMTLLGIRTPERL 595



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 14/143 (9%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKI-------DPDVDSVFIAGKGFINLYLSPSY 97
              N  + L++ L  +P  +A  +V+ + +       DP +  + ++G GF+N+ ++ S 
Sbjct: 41  FQANGMLALAKKLQGNPRELAAKVVSHLPVAATSADPDPVIADIEVSGPGFLNITIADSA 100

Query: 98  LRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           +   L++       G+ + +     GT V I++   N    MHVGH R AV+GD +  ++
Sbjct: 101 ITATLAARAADDRLGVPFAQ---APGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVRIL 156

Query: 155 AFSGYEVTREYYINDAGAQINTL 177
            F+G +V R ++I D G Q   L
Sbjct: 157 EFAGEKVVRRHHIGDWGTQFGML 179


>gi|332297543|ref|YP_004439465.1| Arginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180646|gb|AEE16334.1| Arginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 598

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 128/580 (22%), Positives = 232/580 (40%), Gaps = 111/580 (19%)

Query: 59  LDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSY-LRKILSSIVVSGIEYGR- 114
           + P  IA+   A     P   V   F A   ++N+ L+ S  +  IL  +      YG  
Sbjct: 61  MAPPIIAQKTAAYACAHPSAAVTGCFTAAGPYVNVKLNKSAAVSAILGRVAAQNASYGSC 120

Query: 115 NLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           N  G       +V +EF S N   P+H+GH R   +G++++ ++  +G EV +   IN+ 
Sbjct: 121 NTDGVAPLADRRVMVEFSSPNTNKPLHLGHLRNDALGESVSRILKAAGAEVYKVNIINNR 180

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G  I    L+ + ++ +A      D PE  G     ++     E  DKYS        + 
Sbjct: 181 GVHICKSMLA-YKKFHEAA----GDTPEKLGVKSDRFVGDCYVEF-DKYSKTDAAAESQA 234

Query: 229 WLPIVK----DYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRD 275
              +VK    D SV+A+ K + D          K   +  D ++   D + +G    ++ 
Sbjct: 235 QELLVKWEQGDESVRALWKRMNDWAIRGITQTYKRTGVSFDKLYYESDTYLKGKEEILKG 294

Query: 276 IIDNL---ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + D +      G V+  +          +  +D+K                LL+ DG+  
Sbjct: 295 LADGIFYREEDGSVWVDL---------AEIGLDKKV---------------LLRKDGTAL 330

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVR 390
           Y   D+     ++ +  F+ ++YV+GS+   + K L  V   +  E  +++  L   +V 
Sbjct: 331 YMTQDIGTAIYRHGDWAFNQLVYVVGSEQQYHFKVLFYVLKKLGYEWASRLYHLSYGMVN 390

Query: 391 LYRDGMPIKMSKRAGDFI-------TLR--------------------HVVDEVGSDSVR 423
           L       KM  R G  +       TLR                     V +++   ++ 
Sbjct: 391 LPEG----KMKSREGTVVDADDLINTLRDGALEEIAAKGREEAVGDPAAVAEKIALGALH 446

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVF------YVQYAYARCRSIFRQAKDIFPDLDF 477
           + +L    ++ + F+        KE+  F      Y+QY  AR  SI R+A D       
Sbjct: 447 YYLLQTTPTKDMLFN-------PKESLAFNGNTGPYLQYMGARICSILRKAADTGLQAAS 499

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                 ++  E+E+     +L+  L +YP V+  A    +P +L  +LYD+A  F G + 
Sbjct: 500 PAQAAALLTHETEW-----ELVKLLGDYPSVVVKAAENLDPSQLTGFLYDVAKAF-GKFY 553

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           H  E P +  + + N  L   RL L+    +++ + + ++
Sbjct: 554 H--ECPAVG-IASENPALASARLALIAGTRTVLENAMQLV 590


>gi|269860527|ref|XP_002649984.1| arginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066603|gb|EED44079.1| arginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 559

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 111/528 (21%), Positives = 213/528 (40%), Gaps = 93/528 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y+++IL++++    ++G   +GKG K+ +++ S N     HVGH R  ++G+ +  L+
Sbjct: 88  KKYVKEILTTVLTKDEKFGSVDVGKGEKIVLDYSSPNIAKIFHVGHFRTTILGNFIKHLL 147

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGK 211
            F+G+E     Y+ D G Q   L L  + ++       D  L   ++  V +   K   +
Sbjct: 148 KFNGFEPVSINYLGDWGKQFG-LVLLGYEKFGDKKKLQDDALMHLFHVYVEINKHKEFHQ 206

Query: 212 ELADKYSS-ELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           E  D + + E  + PE  ++W  + +D S++    +     K LN++ D++  E  +++ 
Sbjct: 207 EARDIFKAMEEGSNPEYLKQW-QLFRDISIEKYKTL----YKKLNVEFDVYSGESLYNQK 261

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KS 327
               I                        T+   D D       S  +  D  + L+ K+
Sbjct: 262 GKKIIEKC---------------------TSIVTDED------GSKYINTDYGKALVQKN 294

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQIN 382
           DG+  Y   D+A    + E      +IY++ S+   + ++L  +A  +     EK   +N
Sbjct: 295 DGTTLYITRDIAAIIDRMETYNPKQIIYIVSSEQDQHFQQLFYIAEHILKYPKEKFLHVN 354

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------DSVRFMMLWRKNSELLD 436
                       G+   MS R G    +  V+D   S      D    ++   K + +L 
Sbjct: 355 Y-----------GLVKGMSTREGTVHFIDDVIDLATSVFREFVDEKENVLDKEKTALILA 403

Query: 437 FDFCKVKEQSKENPVFY-------------------VQYAYARCRSIFRQAKDIFPDLDF 477
             F  V + + +    Y                   +QY + R   I  Q  +I  D + 
Sbjct: 404 ISFLIVNDFTAKRIKGYTFDIKKKATTQKGQALGPTLQYTHCRLCGIEEQNAEIVID-NI 462

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D    N++      D +   L+  L  + +V E   +  EP ++ FYL DL +V +   +
Sbjct: 463 DKLNFNLVSN----DDTVANLMYKLLWFEQVNEQTLLDYEPSRVVFYLQDLCNVINSIIN 518

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R       V+  + ++  +RL +  A   ++ +GL I+G+    +M
Sbjct: 519 ILR-------VKDTDTEIAQIRLAVFKAAKIVLRNGLKILGLTVLEKM 559


>gi|221504188|gb|EEE29863.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 607

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 118/551 (21%), Positives = 207/551 (37%), Gaps = 137/551 (24%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+ + +S ++L K L  I+            K  +V ++F S N    MHVGH R  ++
Sbjct: 97  GFVTVDISGAWLCKDLKEILKQKGHLQVPQAEKKLRVMVDFSSPNVAKEMHVGHLRSTII 156

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187
           G+++  ++AF G+EV R  +I D G Q   L                    L+ F++  +
Sbjct: 157 GESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAFYKKAK 216

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           A ++ D D        V     G E A            E W  I           + R 
Sbjct: 217 AAFDADEDFKTRSREMVVKLQGGDEAA-----------LESWRLIC---------DVSRK 256

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM--- 304
           + + +  + D+ + E    RG+                 Y  +LP    + T K  +   
Sbjct: 257 EFEKVYKRLDVSLEE----RGES---------------YYNAVLPKVVQELTDKGMVTVS 297

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
           D  + +F       +V    +KSDG + Y + DLA  + +  ER  D +IYV       +
Sbjct: 298 DGAKCVFTKV---SEVPLMAVKSDGGFGYDSTDLAAVRDRLVERRGDWLIYVTDLGQEEH 354

Query: 364 VKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
             ++ A A         K +++ +   +V+  +DG   K   R+G+ + L  ++DE    
Sbjct: 355 FTKIFAAAEQAGWHLPPKTRLDHMGFGVVQ-GQDGKRFKT--RSGEVVKLVDLLDEAKAR 411

Query: 417 ---------------------------------------------VGSDSVRFMMLWRKN 431
                                                        +G  +V++  L +  
Sbjct: 412 ALKELRRRKEEEKEEEKRESGDGCNASPCTGTTVADEEMDNAAEAIGYSAVKYFDLKQNR 471

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
                F + ++ +  K N   Y+ YAYAR  +IFR+A      LD         P+E + 
Sbjct: 472 HTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKADVDISTLD---------PEELKI 521

Query: 492 DT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPR 544
           +  +E +L V LA++P V+         ++LA Y+Y ++  F   +   +      +N R
Sbjct: 522 EEPAERKLAVTLAQFPDVLATILDDLHIHRLAEYMYKVSGAFTDFYQACKVLGSPQQNTR 581

Query: 545 LRFVQANNRKL 555
           L   +A  + L
Sbjct: 582 LLLCEATRKVL 592


>gi|308806864|ref|XP_003080743.1| Arginyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116059204|emb|CAL54911.1| Arginyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 628

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           + N+ L+ P     ++ S    G  +G     KG +V IE  S+NP  P+H+G+ R  ++
Sbjct: 67  YANMTLNRPMVFEAVMKSAAKQGATFGHTNAAKGKRVIIEHTSSNPNAPLHIGNLRNVMI 126

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           G  LA LM   G+EV   +Y+ND GAQI   AL+
Sbjct: 127 GAHLAKLMKACGHEVQEAFYVNDLGAQIGLTALA 160


>gi|262341218|ref|YP_003284073.1| arginine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272555|gb|ACY40463.1| arginine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 584

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 110/574 (19%), Positives = 237/574 (41%), Gaps = 136/574 (23%)

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           F   +GF+N     +Y   +L  ++ +   Y   L  K  ++ IE+ S N   P+H+GH 
Sbjct: 77  FSVIEGFLNFIFKENYYIHLLKKMLNTNF-YHLKLPSK--RIMIEYSSPNTNKPLHLGHV 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG-Y 200
           R +++G ++A ++   G+++ +   IND G  I+     + W+        DS   +G +
Sbjct: 134 RNSLIGSSIAKILKMVGHKIIKIQIINDRG--IHICKSMIAWKKFGKGETPDSIKMKGDH 191

Query: 201 YPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           + G Y       L DK Y  E+    ++  +PI+    ++A     R+ LK         
Sbjct: 192 FVGKYY-----SLFDKIYREEIRKTSKQDKIPIL----IEA-----RELLKK-------- 229

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VG 317
                +  GDP+  R I   + +  +VY G       +T +K ++   ++ + S +  +G
Sbjct: 230 -----WECGDPTT-RSIWKKMNK--WVYNGF-----EETYRKLEISFDKIEYESNVYKIG 276

Query: 318 DDV----------------------------DRPLLKSDGSYTYFAADLAYFKCKYER-G 348
            ++                             + LL+SD +  Y   D+     ++ +  
Sbjct: 277 KEIIKKGLEKGIFFKKEDGSIWIDLIQEGFDQKLLLRSDQTSVYITQDIGTSVERFRKYN 336

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAG 405
            D ++Y++G +   + + L ++   +        + + +L  L  + + +   +M  R G
Sbjct: 337 IDQLVYIVGKEQDYHFQILFSILKRLG------YIWVNKLFHLSYEMVYLPSGRMKSREG 390

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSE--------------LLDFDFCKVKEQSK--- 447
           + I     + E+ S + + F+    K+ E               L + F K+  + K   
Sbjct: 391 NVIDADSFILEMYSIAKKNFLKKTSKSKEKVEQEKSYEILGLGALKYYFLKIDPRKKIIF 450

Query: 448 --ENPV-------FYVQYAYARCRSIFRQ-------AKDIFPDLDFDLFPRNVIPQESEF 491
             E  +        Y+QY Y+R RS+ R+         D + ++ FD++ +N+I      
Sbjct: 451 YPEKSIDFKGKTGTYIQYTYSRIRSLERKFFEVCSLLNDYWSNIKFDMYEKNMIKI---- 506

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
                     L +YP +++ +     P  +A Y+Y+++  F+  +   +    L  + +N
Sbjct: 507 ----------LQKYPSILKKSATTFNPSLIANYIYEVSKTFNLLYEKKKLIDSLDLIHSN 556

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + + ++H   +++ SG+N++G++  + M
Sbjct: 557 ------ICMNIIHVTGNVLKSGMNLLGIKMLDRM 584


>gi|326562857|gb|EGE13145.1| arginyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326567639|gb|EGE17747.1| arginyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 412

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++ +      G    N  M  ++ LG++P   A+ ++  + ID   + + IAG GFIN++
Sbjct: 27  LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86

Query: 93  LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L   ++ K  +   +S   G+   +N       V +++ S N    MHVGH R  ++GD+
Sbjct: 87  LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTL 177
           +   + F G  V R  ++ D G Q   L
Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGML 169


>gi|237843883|ref|XP_002371239.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968903|gb|EEB04099.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221483811|gb|EEE22123.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 607

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 118/551 (21%), Positives = 207/551 (37%), Gaps = 137/551 (24%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+ + +S ++L K L  I+            K  +V ++F S N    MHVGH R  ++
Sbjct: 97  GFVTVDISGAWLCKDLKEILKQKGHLQVPHAEKKLRVMVDFSSPNVAKEMHVGHLRSTII 156

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187
           G+++  ++AF G+EV R  +I D G Q   L                    L+ F++  +
Sbjct: 157 GESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAFYKKAK 216

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           A ++ D D        V     G E A            E W  I           + R 
Sbjct: 217 AAFDADEDFKTRSREMVVKLQGGDEAA-----------LESWRLIC---------DVSRK 256

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM--- 304
           + + +  + D+ + E    RG+                 Y  +LP    + T K  +   
Sbjct: 257 EFEKVYKRLDVSLEE----RGES---------------YYNAVLPKVVQELTDKGMVTVS 297

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
           D  + +F       +V    +KSDG + Y + DLA  + +  ER  D +IYV       +
Sbjct: 298 DGAKCVFTKV---SEVPLMAVKSDGGFGYDSTDLAAVRDRLVERRGDWLIYVTDLGQEEH 354

Query: 364 VKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
             ++ A A         K +++ +   +V+  +DG   K   R+G+ + L  ++DE    
Sbjct: 355 FTKIFAAAEQAGWHLPPKTRLDHMGFGVVQ-GQDGKRFKT--RSGEVVKLVDLLDEAKAR 411

Query: 417 ---------------------------------------------VGSDSVRFMMLWRKN 431
                                                        +G  +V++  L +  
Sbjct: 412 ALKELRRRKEEEKEEEKRESGDGCNASPCTGTTVADEEMDNAAEAIGYSAVKYFDLKQNR 471

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
                F + ++ +  K N   Y+ YAYAR  +IFR+A      LD         P+E + 
Sbjct: 472 HTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKADVDISTLD---------PEELKI 521

Query: 492 DT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPR 544
           +  +E +L V LA++P V+         ++LA Y+Y ++  F   +   +      +N R
Sbjct: 522 EEPAERKLAVTLAQFPDVLATILDDLHIHRLAEYMYKVSGAFTDFYQACKVLGSPQQNTR 581

Query: 545 LRFVQANNRKL 555
           L   +A  + L
Sbjct: 582 LLLCEATRKVL 592


>gi|302383831|ref|YP_003819654.1| arginyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194459|gb|ADL02031.1| arginyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 600

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 123/582 (21%), Positives = 229/582 (39%), Gaps = 91/582 (15%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  +  R+  DP + +V +AG GFINL ++ + L    + +       G + +  
Sbjct: 54  NPRELAGRVAERLAADPRLSAVEVAGPGFINLKIADAALSARAAEVASDADHAGASPVAA 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV I+F   N   PMHVGH R A++G++L  L  F G +VT + +  D G Q+  L +
Sbjct: 114 PRKVVIDFGGPNVAKPMHVGHLRSAIIGESLKRLFRFRGDDVTGDAHFGDWGFQMGLLIV 173

Query: 180 SV--------FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNF 224
           +         F       +  +S +  G    +Y    G+   D       + ++  L  
Sbjct: 174 ACGDEGLADGFMADGDGPFPAESPVTLGDLDRLYPLAAGRAKEDPAFRDRARKATAELQG 233

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
               +L + + +   +   ++R +   L +  D++  E D    DP  I  ++ +L  + 
Sbjct: 234 GRPGYLALWRHFVAVSREALVR-EYGTLAVDFDLWNGESD---ADPL-IAGMVVDLKTKA 288

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFK 342
            + E      +     +    RK+ L   ++V      PLL   S+GS  Y   DLA   
Sbjct: 289 LLVED--DGAQVVHVARPGETRKKKLADGSVVEAPSPPPLLVVSSEGSAMYGTTDLATIL 346

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL--LCELVRLYRDGMPIK 399
            +  R   D ++YV+    + + +++    A++  + A+   L  L        DG P K
Sbjct: 347 DRRNRIDPDLILYVVDERQAEHFEQV--FRASILARYAEPGSLEHLGFGTMNGTDGKPFK 404

Query: 400 MSKRAGDFITLRHVVD-------------EVGSD----------------SVRFMMLWRK 430
              RAG  + L  ++              E+G+D                +++F  L   
Sbjct: 405 T--RAGGVLKLNDLITQATDKARDRLREAELGADLDEATFEDTAHKVAIAALKFADLSNS 462

Query: 431 NSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
            +    FD  +    + K  P  Y+ Y   R +S+ R+A +                QE+
Sbjct: 463 RTTSYVFDLDRFMSFEGKTGP--YLLYQVVRIKSLLRRAAE----------------QEA 504

Query: 490 EF------DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +       + +E  L + L  + + +  A   + P+ +A + Y LA  F   ++      
Sbjct: 505 KAGLVAISEPAERDLALTLDAFDQAVVEAYDKRSPHVIAEHAYRLAQAFSKFYAA----- 559

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A +      RL L  A    +   L ++G+++P  M
Sbjct: 560 -CPVLAAADPATVGSRLTLSKAALDQLVIALGLLGIDAPERM 600


>gi|229196421|ref|ZP_04323168.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228587058|gb|EEK45129.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 595

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 333 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 378

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 379 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 438

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 439 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 494

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P+VIE A    EP  ++ Y+
Sbjct: 495 RKESVEFETCTFALK-----------DDHSWNIVKLLNKFPKVIEAACNKNEPSVISKYV 543

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R +  N  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 544 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 595



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 35  DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 92  KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 149

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 202


>gi|114797992|ref|YP_761395.1| arginyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123128508|sp|Q0BYP8|SYR_HYPNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114738166|gb|ABI76291.1| arginyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 589

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 1/123 (0%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA  I AR+K    V S  +AG GFINL +S + L      +    +         
Sbjct: 54  NPREIAGEIAARLKEHASVLSAEVAGPGFINLRVSDAALSARAEHVRGDAMAGAEKAADA 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+F  AN   PMHVGH R AV+GDTL  +  F+G EVT + ++ D G Q+  L  
Sbjct: 114 AVTV-IDFGGANVAKPMHVGHLRSAVIGDTLQRICRFAGDEVTSDVHLGDWGLQMGHLVT 172

Query: 180 SVF 182
            ++
Sbjct: 173 ELY 175


>gi|238008168|gb|ACR35119.1| unknown [Zea mays]
          Length = 390

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 60/300 (20%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  I + I   +     ++S  +AG GF+N+ LS  ++ + +  ++V+GI+    ++  
Sbjct: 128 NPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPV 187

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178
              V I+F S N    MHVGH R  ++GDTLA +  FS  +V R  ++ D G Q   L  
Sbjct: 188 KRAV-IDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIE 246

Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                              L +F++  +  ++ND +       GV     G+E   +Y  
Sbjct: 247 YLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDNDPEFKARAQQGVVRLQGGEE---RY-- 301

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                  E W  I           I R +   +  + ++ + E      +P  I  +++ 
Sbjct: 302 ------REAWKKIC---------DISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEE 345

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L+ +G + E                +  +++F   + G  +   ++KSDG + Y + DLA
Sbjct: 346 LSSKGLIKES---------------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLA 387


>gi|323308834|gb|EGA62071.1| Msr1p [Saccharomyces cerevisiae FostersO]
          Length = 530

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 107/464 (23%), Positives = 188/464 (40%), Gaps = 83/464 (17%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
           DP+ +A      +     +  V   G  F+  +L   YL +  + +I++   +YG+    
Sbjct: 92  DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 150

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF S N   P H GH R  ++G  L++L    G+ VTR  Y+ D G Q   LA
Sbjct: 151 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 210

Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224
           +  F RY  ++ L       P  +   VY+K +  +LA +          S E  +F   
Sbjct: 211 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 264

Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279
               +E  + I K +   ++   I+     LNI  DIF  E    +   +   DI   +N
Sbjct: 265 LENGDENAIKIWKRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 323

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338
           L ++    +G L    ++ +++              +G  V   + KSDG+  Y   D+ 
Sbjct: 324 LVKE---IDGALVIDLTQWSKR--------------LGRVV---VQKSDGTTLYLRRDVG 363

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A  + K    FD M+YV+ S    Y+ +   +         ++N    + ++    GM  
Sbjct: 364 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 416

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432
            MS R G+ + L  ++DE    +++ M   +                          K+ 
Sbjct: 417 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 476

Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL 475
            + +++F   +  S E     Y+QY ++R RS+ R + D   D+
Sbjct: 477 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDM 520


>gi|254293416|ref|YP_003059439.1| arginyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041947|gb|ACT58742.1| arginyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 610

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA  +  +I+    V+SV +AG GF+N+ +S + L    + I+  G + G   +  
Sbjct: 54  NPREIAGEVAPKIEALELVESVDVAGPGFLNITVSAAALEGRTTEILADG-KAGGGSVET 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+F   N   PMH+GH R  ++GD+L  L  F G +VT + ++ D G Q+  L +
Sbjct: 113 PRNVMIDFGGWNVAKPMHIGHLRSTIIGDSLQRLFRFLGDDVTSDVHLGDWGLQMGLLIV 172

Query: 180 SVFWRYQQALYNNDSDLPEGYYP 202
            V        Y +D+   EG YP
Sbjct: 173 GVSEEQPDLPYFDDN--FEGEYP 193



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 20/175 (11%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           + D+V   +++F  L    ++   FD  + V  + K  P  Y+ YA  R +S+ R+AK+ 
Sbjct: 454 IADKVALAAIKFADLSNVRTKNYVFDLDQFVAFEGKTGP--YLLYAAVRVKSLMRRAKE- 510

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                       ++    + +  E + L + L  +   ++ A   + P+ +  ++Y+LA 
Sbjct: 511 ----------EGIVAGAMKIELKEERVLALQLDAFEGALKLAYANRTPHGICDHVYNLAQ 560

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            F   W++    P L+    ++ K +  RL L  A    + +GL++IG+E+P  M
Sbjct: 561 AFSSFWTNA---PILKAGVPDDVKAS--RLALAQATLKQLETGLSLIGIETPERM 610


>gi|225864159|ref|YP_002749537.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229184415|ref|ZP_04311622.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|225790718|gb|ACO30935.1| arginine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228599211|gb|EEK56824.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 562

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAACNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R +  N  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229091172|ref|ZP_04222395.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228692303|gb|EEL46039.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 562

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAACNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R +  N  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|118477608|ref|YP_894759.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118416833|gb|ABK85252.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 562

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAACNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R +  N  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|111115422|ref|YP_710040.1| arginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263411|ref|ZP_03435406.1| arginyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|123145673|sp|Q0SMR4|SYR_BORAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110890696|gb|ABH01864.1| arginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215980255|gb|EEC21076.1| arginyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 585

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 130/600 (21%), Positives = 241/600 (40%), Gaps = 105/600 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I I++P     G +S      LS+ L L   TI+E I+  +K   ++     A   ++N+
Sbjct: 33  INIQKPPKSDLGDISI-LIFELSKTLKLPIETISEEIIKALKAKYEIK----AMGPYLNI 87

Query: 92  YL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    Y+   +  +      YG +      K+ +EF S N   P+HVGH R  V+G++L
Sbjct: 88  KIPRKEYIHNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESL 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYYPGVY 205
           + ++   G ++ +   IND G  I  + LA   F      ++A    D  + + Y     
Sbjct: 148 SRILKAVGAKIIKLNLINDRGVHICKSMLAYKKFGNEITPEKAFKKGDHFIGDFYVQYNK 207

Query: 206 LKHVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-I 258
                +   ++    LL + +      E W  +  +++++     I++  K  N   D I
Sbjct: 208 YAQENENAEEEIQDLLLKWEQKDASTIELWKKL-NNWAIEG----IKETYKITNTSFDKI 262

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRST 314
           ++  + F  G     ++++     +G+ Y+     I       + +K D   KQ      
Sbjct: 263 YLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPLDSDEKTDTKVKQ------ 311

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL----EA 369
                  + L++S+G+  Y   DL     +  E  F+ MIYV+GS+   + K L    E 
Sbjct: 312 -------KVLIRSNGTSIYLTQDLGNIAVRIKEFNFEEMIYVVGSEQIQHFKNLFFVSEK 364

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------TLRHVVDEVGSD- 420
           +  + ++K   ++  +  LV    DG   KM  R G+ I         +  ++ E+    
Sbjct: 365 LGISKNKKLFHLSHGMVNLV----DG---KMKSREGNVIDGDNLILDLMESILPEITQKI 417

Query: 421 ----------------SVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRS 463
                           ++ + +L  K++   D  F K +  S   N   Y+QY  AR  S
Sbjct: 418 ENKENAKKNALDIALGAIHYYLL--KSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475

Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           I  +       I   ++F+L     +  E E+D     +I  ++E    I  A     P 
Sbjct: 476 ILEKYNTLSIPIIKKINFEL-----LEHEKEWD-----IIKIISELEENIIKAAKDLNPS 525

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  Y Y LA  F  ++        +R +  NN  LT  R++ + A+   I + + ++ +
Sbjct: 526 ILTSYSYSLAKHFSAYYQ------EVRVIDINNIDLTAARIEFLKAILQTIKNCMYLLNI 579


>gi|229178575|ref|ZP_04305939.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228604733|gb|EEK62190.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 562

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFVESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|315645723|ref|ZP_07898847.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453]
 gi|315279201|gb|EFU42511.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453]
          Length = 285

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 14/145 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVF---IAGKGFI 89
           +E+P    HG  +TN AM L++ L   PL IAELI   ++ D P    VF   +   GFI
Sbjct: 33  VEQPSSMEHGDYATNIAMQLAKLLRKAPLHIAELIKTELEQDVPFKQLVFATEVVAPGFI 92

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL++           +  +  E          K+ IE  S NP    H+GH R + +GDT
Sbjct: 93  NLHIDWEAWANHPFELPPATHE----------KIVIEHTSINPNKSAHIGHLRNSCIGDT 142

Query: 150 LASLMAFSGYEVTREYYINDAGAQI 174
           L  LM   GY+V    YI+D G Q+
Sbjct: 143 LVRLMRKLGYKVEAHNYIDDLGNQL 167


>gi|229011482|ref|ZP_04168670.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228749773|gb|EEL99610.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 562

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEDVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSTISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ N  K +  RL L +AV  ++  GL ++GV +P 
Sbjct: 509 YVLDVAQAFNKYYGN------VRILEENEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L  I+    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|323457135|gb|EGB13001.1| hypothetical protein AURANDRAFT_18800 [Aureococcus anophagefferens]
          Length = 584

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 11/178 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLD-------PLTIAELIVARIKIDPDVDSVFIAGK 86
           + R  + A G    NA M + + L  +       P  + E I A +  +  + S  +A  
Sbjct: 23  VMRCGNAAFGDYQCNAPMGIFKTLKANGVARLPSPRAVGEAIAAAVPANGVLKSASVAPA 82

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNL--IGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           GFIN ++  S L      +  SG+     L   G   KV ++F S N    MHVGH R  
Sbjct: 83  GFINAHVEESLLSAHAQRVAASGVAAPPPLSAFGGARKVLVDFSSPNIAKEMHVGHLRST 142

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGY 200
           ++GDT+  ++ F G++V R  ++ D G Q   L   +   Y   L N  N +DL   Y
Sbjct: 143 IIGDTICRVLEFCGHDVRRVNHVGDWGTQFGMLITHMEEAYPDFLQNPPNITDLTTFY 200


>gi|228965172|ref|ZP_04126266.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794406|gb|EEM41918.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 481

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 219 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 262

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 263 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 322

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 323 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 378

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 379 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 427

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 428 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 479

Query: 584 EM 585
           EM
Sbjct: 480 EM 481



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +L +++    E+G+N  G    V I++ S N   P  +GH R  ++G++L  +    GYE
Sbjct: 12  VLKTVLAEKEEFGQNHFGCEKTVVIDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYE 71

Query: 161 VTREYYINDAGAQINTL 177
           V    YI D G Q   L
Sbjct: 72  VVGINYIGDWGTQFGKL 88


>gi|194378726|dbj|BAG63528.1| unnamed protein product [Homo sapiens]
          Length = 454

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 107/507 (21%), Positives = 201/507 (39%), Gaps = 110/507 (21%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA----------------- 178
           MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L                  
Sbjct: 1   MHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 179 --LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             L VF++  +  ++ + +  +  Y  V L   GK           N    K   ++ D 
Sbjct: 61  GDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQ-GK-----------NPDITKAWKLICDV 108

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           S Q + KI      AL++   +    + F++     + DI+     +G+V          
Sbjct: 109 SRQELNKI----YDALDVS--LIERGESFYQ---DRMNDIVKEFEDRGFV---------- 149

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
               + D D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 150 ----QVD-DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 201

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFI 408
           + +  S + + + A A  +     ++        R++  G  +       K   R+G+ +
Sbjct: 202 VDNGQSVHFQTIFAAAQMIGWYDPKVT-------RVFHAGFGVVLGEDKKKFKTRSGETV 254

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L  ++ E                             V    +++  L         F F
Sbjct: 255 RLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSF 314

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQL 498
            K+ +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E  L
Sbjct: 315 DKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWNL 368

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M 
Sbjct: 369 GRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDR-QTGKILKVNMW 427

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R+ L  AVA+++  G +I+G++    M
Sbjct: 428 RMLLCEAVAAVMAKGFDILGIKPVQRM 454


>gi|299138914|ref|ZP_07032091.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX8]
 gi|298599068|gb|EFI55229.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX8]
          Length = 661

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 45/360 (12%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           R+++ L E   K  VE   L  +VIE P     G ++   A  L++ L   P  IA+ + 
Sbjct: 12  RIQSLLAE---KYGVE---LTNLVIELPPKIEFGEMALPVAFELAKRLKKAPRAIAQELQ 65

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           + +   P V SV IAG G++NL L  +      +++     +   ++ G G ++ +E  S
Sbjct: 66  SALAELPGVASVEIAGAGYLNLKLDRA------ATVQRIAADEHASVGGAGFRL-VEHTS 118

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMA----FSGYEVTREYYINDAGAQINTLALSVFWRY 185
            NP    HVGH R A++GD+ A ++       GYE   + YI++ G Q+  + ++V    
Sbjct: 119 INPNKAAHVGHLRNAILGDSFARMLKPDEFKPGYETGVQNYIDNTGVQVADIVVAVTAVK 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQA- 240
              L      L E       L +V  +L    +  Y S+       K L +   + ++A 
Sbjct: 179 GMTLDAVREWLTELLETNQRLDYVCWDLYAAVSQWYDSDPAQAAARKQLRLDTLHKIEAG 238

Query: 241 -----------MMKIIRDDLKA---LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                         ++R  L+    L I++D    E +        +       ARQ  V
Sbjct: 239 GNDTAEIAELISTGVLRRHLQTMERLGIEYDFLPRESEI-------LHLKFWETARQLMV 291

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY 345
            +G+L        + C + R+  +  +T+ G D D + +++S+G+ TY   D+AY   K+
Sbjct: 292 EKGVLYLETEGKNKGCWVMRRAGV-EATLEGPDEDAKIIIRSNGTVTYVGKDIAYHLWKF 350


>gi|228914787|ref|ZP_04078396.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845106|gb|EEM90148.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 562

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG+ +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229190292|ref|ZP_04317293.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228593076|gb|EEK50894.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 562

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESAEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   D     V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DQFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|303390226|ref|XP_003073344.1| arginyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302490|gb|ADM11984.1| arginyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 563

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 115/530 (21%), Positives = 217/530 (40%), Gaps = 97/530 (18%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L+ +L  I  +   +G N IGKG ++ +E+ S N     H+GH R  ++G  + +L+  S
Sbjct: 89  LKDVLGYIQSNKETFGNNSIGKGKRMVVEYSSPNIAKIFHIGHLRTTILGQFIVNLLKAS 148

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHV--GKE 212
           GYE     Y  D G Q   + L        + Y ++ +L   P  +   VY+K     KE
Sbjct: 149 GYETVSMNYFGDWGKQFGFVLLGY------SKYGSEEELEKDPLKHLFNVYVKISADAKE 202

Query: 213 --LADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               D  + E+    EE   +W   +     +  ++  +   + LN++ D++  E  +++
Sbjct: 203 NPEVDLEAREIFRKMEEENDEWCMNLWKRFRELSVEKYKSLYERLNVRFDVYSGESLYNK 262

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                 ++I++        Y+ +          K D D  ++      +G +    ++K+
Sbjct: 263 KG----KEIVE-------AYKEV----------KTDEDGSKVF----DLGKNRKVLVMKN 297

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   D+A    + E+   + +IYV+ ++ + + + L  +   +   +++      
Sbjct: 298 DGTTLYITRDIAAAIERLEKYSPEKIIYVVSTEQNKHFEDLFKILGILGHDESKF----- 352

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML-WRKN-------------- 431
            L   Y  G+   MS RAG    L  ++ E  S   + MM    KN              
Sbjct: 353 -LHVSY--GLVAGMSTRAGKAQFLEDIIQESTSVMKKVMMSDSTKNSFTMDEIDQTAEVL 409

Query: 432 --SELLDFDFC-------------KVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDL 475
             S LL  DF              + +  S   P  Y+QYA+ R +SI  +  D+ + D+
Sbjct: 410 AISTLLVMDFTARRVKGYEFDIEKRARNTSGTGP--YLQYAHCRLKSIESRNSDVDYSDI 467

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +   F    +P+          L+  L  +   +E      EP ++  YL DLAS  +  
Sbjct: 468 NTIDFSLIHVPE-------VFNLVYKLLWFEHAVEKCLDDYEPSRIVTYLQDLASCVNVA 520

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +       V    ++L   RL ++ +   ++++GL I+G    N+M
Sbjct: 521 INSLK-------VLGVEKELARARLLVLSSARIVLHNGLKILGATPLNKM 563


>gi|156083208|ref|XP_001609088.1| arginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796338|gb|EDO05520.1| arginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 669

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 118/581 (20%), Positives = 224/581 (38%), Gaps = 92/581 (15%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLS 94
           R  D   G + T  A  +S+   +   T A  +   +K + D V   F+ G  ++N+ L 
Sbjct: 68  RIADGCEGDIHTKIAHTVSKLAQIPIETAAIRLRDELKKESDAVKDCFVTGNHYVNIVLH 127

Query: 95  PSYLRKILSSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             Y+R +L  +     +  G   +  GT V +++ S N    +H+GH R A +G  L+++
Sbjct: 128 DGYIRNVLREMDSDQAVRLGVPYMSSGTVV-VDYFSPNVGKDLHMGHLRSAAIGAALSNI 186

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQ----QALYNNDSD---------LPEGY 200
           + F G  V R  ++ D G+Q   + +     Y     +A   + +D         L +GY
Sbjct: 187 LEFCGSRVIRRNHVGDFGSQSGQI-MRYLMEYDPTSIEAFTESQTDKERAKEFTRLIDGY 245

Query: 201 -----------------YPGVYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSVQAM 241
                             PGV  + +   + + Y  + EL +   E  L   ++ ++   
Sbjct: 246 SIWSIKGITTSGRFSRPTPGVSAELIINTMGEIYKNAKELCDTDPEFQLRSKEETALLQR 305

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI------------IDNLARQGYVYE- 288
            K +  +     ++  I    D   +     IRD+            +D L +QG+    
Sbjct: 306 GKHMYQECWKSIVKTSIASHRDILEQFKLDAIRDVPESCYAKRVFAFVDRLVKQGHALAR 365

Query: 289 ---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
               I+ P ++   Q  D   ++L           D  L+  +G+ TY A D+   + + 
Sbjct: 366 PDGSIVIPWQALNEQSGDTPTEELH----------DLVLITKEGAATYLAVDITALEYRL 415

Query: 346 -ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            E   + +IY+       +  ++ A+A  +   K Q    L     L  DG  ++   + 
Sbjct: 416 SEHKPNEIIYITDLAQKPHFDKVIAIARHIGFLKDQKIEHLGFGAVLSEDGKKMRSRTKT 475

Query: 405 GDFI------TLRHVVDEV------------------GSDSVRFMMLWRKNSELLDFDFC 440
           G  +      TL+  +DEV                     S+ +  L  K+++   F   
Sbjct: 476 GVNVHDIWKYTLKRCLDEVEKKGEFLGQASMCMAHKLAVGSMLYADLSTKHTDTYVFSTD 535

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           ++  Q   N +  + Y Y R RSI R+  +D    ++ DL+   ++  +   + S  QL 
Sbjct: 536 RLLNQGGNN-LISILYPYVRARSILRKIEQDAIKVVNEDLW---LVGGKPFLNRSARQLA 591

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           +H+      I      + P++L  Y+  L  +F   + + R
Sbjct: 592 LHILGLENAIFTTAYLKTPHRLCKYVRSLGRIFTHFYDNNR 632


>gi|206971991|ref|ZP_03232939.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732914|gb|EDZ50088.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 562

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTFVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFVESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|323454276|gb|EGB10146.1| hypothetical protein AURANDRAFT_22930 [Aureococcus anophagefferens]
          Length = 644

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 12/145 (8%)

Query: 43  GHLSTNAAMILSRPLGLD--PLTIAELIVARIKIDPDVDSVF-----IAGKGFINLYLSP 95
           G    NAA+ LS+ LG    P  +A  IV  ++ D  V SV      IAG GF+NL LS 
Sbjct: 84  GDFQCNAALALSKKLGAPRPPRDVAADIVRALEADAGVASVVSFPLEIAGPGFVNLRLSD 143

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            YL +  +++       GR  + +      V +++ S N    MHVGH R  V+GD LA+
Sbjct: 144 DYLARTAAAMAAD--ADGRCGVPRAAAPRTVVVDYSSPNIAKEMHVGHLRSTVIGDALAN 201

Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177
            + F+G++V R  ++ D G Q   L
Sbjct: 202 CLEFAGHDVRRVNHVGDWGTQFGML 226


>gi|30262191|ref|NP_844568.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527469|ref|YP_018818.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185032|ref|YP_028284.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872247|ref|ZP_02216885.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167632845|ref|ZP_02391171.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641054|ref|ZP_02399310.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686613|ref|ZP_02877834.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708447|ref|ZP_02898890.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650788|ref|ZP_02933685.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567906|ref|ZP_03020817.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227815009|ref|YP_002815018.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229600399|ref|YP_002866544.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254737206|ref|ZP_05194910.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743609|ref|ZP_05201294.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751521|ref|ZP_05203558.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759036|ref|ZP_05211063.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38372561|sp|Q81R81|SYR2_BACAN RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|30256817|gb|AAP26054.1| arginine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502617|gb|AAT31293.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178959|gb|AAT54335.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712040|gb|EDR17579.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510952|gb|EDR86342.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167531657|gb|EDR94322.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126686|gb|EDS95570.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170669689|gb|EDT20431.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083249|gb|EDT68310.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560961|gb|EDV14935.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004400|gb|ACP14143.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229264807|gb|ACQ46444.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 562

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG+ +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229150431|ref|ZP_04278647.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228632924|gb|EEK89537.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 562

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|320010139|gb|ADW04989.1| arginyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 589

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 126/303 (41%), Gaps = 65/303 (21%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
           PL+  K++G Y Y A DL+  + +      D ++YV+ +  S + K +   A  A     
Sbjct: 312 PLIVKKTNGGYGYAATDLSAIRDRVRNLKADTLLYVVDARQSLHFKMVFETARRAGWLND 371

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
             + + L    V L +DG P K   R G  + L  ++DE                     
Sbjct: 372 DVKAHQLAFGTV-LGKDGKPFKT--REGTTVRLEDLLDEAVERATAVVREKAEKVGLSEE 428

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L         FD  ++   + +  V Y+QYAYAR RSI R+A
Sbjct: 429 EIVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKA 487

Query: 469 KDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            D  P    + DL P            +E  L +HL ++  V+E      EP+KLA YLY
Sbjct: 488 GDAKPAAHPELDLAP------------AERALGLHLDQFGAVLEEVAEGYEPHKLAAYLY 535

Query: 527 DLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            LAS     +   +    ENP          ++   RL LV   A  ++ G+ ++G+ +P
Sbjct: 536 QLASHLTTFYDQCQVLSDENP---------AEVVENRLFLVELTARTLHQGMKLLGIRTP 586

Query: 583 NEM 585
             +
Sbjct: 587 ERL 589



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  + A +     +  + ++G GF+N+ L+   +   L++
Sbjct: 41  FQANGILALAKKLKGNPRELASQVTAALPAGDLIKDIEVSGPGFLNVTLTDRAIITTLAA 100

Query: 105 IVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
               G   G       GT V I++   N    MHVGH R AV+GD +  ++ F+G  V R
Sbjct: 101 RAADGDRLGVPPKAAPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGENVVR 159

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNND 193
            ++I D G Q   L   +F    +  +  D
Sbjct: 160 RHHIGDWGTQFGMLIQYLFEHPDELRHGGD 189


>gi|229069737|ref|ZP_04203022.1| Arginyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228713358|gb|EEL65248.1| Arginyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 562

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|282854895|ref|ZP_06264229.1| arginine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582041|gb|EFB87424.1| arginine--tRNA ligase [Propionibacterium acnes J139]
          Length = 556

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 7/138 (5%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH  +N A+ L++     P  +A  IVA++ I+   ++  IAG GFINL L    L ++ 
Sbjct: 31  GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 90

Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S  V    +GI        K  +V I++ + N    MHVGH R  ++GD    +++  G+
Sbjct: 91  SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146

Query: 160 EVTREYYINDAGAQINTL 177
            V  + +I D G Q   L
Sbjct: 147 TVIPQNHIGDWGTQFGML 164



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 29/282 (10%)

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375
           D P++  K DG + Y A DLA  + +  +   D +IYV     S + + L  VA  A   
Sbjct: 287 DAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFL 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKN 431
               +   +   +V L  DG P K   R G  ++L  ++DE  + +   + L    +   
Sbjct: 347 PDDVEAEHVGYGMV-LGPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADL 403

Query: 432 SELLDFDFCKVKE---QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRN 483
           S  L  D+    E   Q+  +   Y+QYA+AR   I R+A      ++ P+ D D     
Sbjct: 404 SNGLQKDYVFDAERMVQTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWG 463

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +    + P
Sbjct: 464 RISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCP 518

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 519 VLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|254721052|ref|ZP_05182843.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 562

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG+ +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETYTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|228955955|ref|ZP_04117891.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228803735|gb|EEM50418.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 562

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|145481313|ref|XP_001426679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393755|emb|CAK59281.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 124/573 (21%), Positives = 224/573 (39%), Gaps = 133/573 (23%)

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
           D  +  V    KGF+N+ L+  ++ + +++++V+G+++    + K  KV ++F S N   
Sbjct: 89  DNVIQKVEAIDKGFLNIQLNDKFIEEEINALLVNGLKFP---LEKKQKVAVDFSSPNIAK 145

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
            MHVGH R  ++G++L  ++ F G EV R  +I D G Q   L   +   Y     N   
Sbjct: 146 EMHVGHLRSTILGESLCRILEFQGQEVVRINHIGDWGTQFGMLINHLLEEYPDYQTNR-- 203

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
                  P +      KEL D Y      F         +++ V++   +++  L+AL  
Sbjct: 204 -------PAL------KELEDLYKEAKKKFDSN------EEFKVKSQQFVVK--LQAL-- 240

Query: 255 QHDIFISEDDFHRGDPSPIR--DIIDNLARQGY--VY-----------EGILPPPKSKTT 299
                         DP  I    +I  L+RQ Y  +Y           E    P  ++  
Sbjct: 241 --------------DPICIDAWKMICELSRQEYNKIYQRLNVKITEYGESYYNPILNEIV 286

Query: 300 QKC------DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352
           ++C      ++D+   + R  + G+ V   ++K DG Y Y   D+A  K +  E   D +
Sbjct: 287 KECEAKGIVELDQGAKIIR--VKGEKVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRL 344

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKK---AQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+       + K +   A  +   +     +  +   LV L  DG   K   R+GD + 
Sbjct: 345 LYLTDVGQWNHFKLVFEGAKLMGWHQPPNTSMEHMGFGLV-LGPDGK--KFKTRSGDTVK 401

Query: 410 LRHVVDE---------------------------------------VGSDSVRFMMLWRK 430
           L  ++DE                                       +G  ++++  L + 
Sbjct: 402 LIDLLDEAKERALKQIQQRVQENQQGKEFSTGTALSPEEFETAAERMGIAAIKYYDLKQN 461

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                +FD+ K+ +  K N   Y+ Y+Y R  SI R++       DF++F  +      +
Sbjct: 462 RISDYNFDYDKMLD-PKGNTAVYLMYSYVRMLSILRKS----GIQDFEVFKAD-----HK 511

Query: 491 FDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           F  +   E  L   L  +  V+++ T       L  Y+YD+       ++  R       
Sbjct: 512 FKITHQHERHLAAQLLRFVDVLQSVTDQLAINWLCDYIYDICVKIAEAYNQYR------- 564

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
               N + T  RL L  AV  ++     ++G+E
Sbjct: 565 --ILNDEHTQTRLLLCEAVRMVLLQSFYLVGIE 595


>gi|291333572|gb|ADD93266.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 196

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 86  KGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           K F N+ L   +L   I   I  S  EYGR  + K   + +E  SAN TGP H+G  R  
Sbjct: 78  KAFCNIVLDWDFLFEDIFDEINNS--EYGRG-VSKPDSILLEHTSANATGPFHMGRARNP 134

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++GD+++ L+ + GYEV+ EYY+ND G Q  T+A  +
Sbjct: 135 IIGDSVSRLLKYYGYEVSTEYYVNDTGRQAATVAYGI 171


>gi|228939320|ref|ZP_04101912.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972198|ref|ZP_04132813.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978812|ref|ZP_04139182.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228780914|gb|EEM29122.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228787511|gb|EEM35475.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820344|gb|EEM66377.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326939896|gb|AEA15792.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 562

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  ++ F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAIIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVETPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L ++     E+G+N  G    V 
Sbjct: 59  KEVAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVSAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|29831291|ref|NP_825925.1| arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|39932148|sp|Q82E68|SYR_STRAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29608406|dbj|BAC72460.1| putative arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 590

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A  +VAR++    +  + ++G GF+N+ ++   + + L++
Sbjct: 41  FQANGILALAKKAKANPRDLATQVVARVESGEVIKDIEVSGPGFLNITITDQAITRNLAA 100

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
               G   G  L        I++   N    MHVGH R AV+GD +  ++ F+G  V R 
Sbjct: 101 RYEDGERLGVPLAEHPGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVQILEFTGENVVRR 160

Query: 165 YYINDAGAQINTL 177
           ++I D G Q   L
Sbjct: 161 HHIGDWGTQFGML 173



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 53/297 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377
           PL+  KSDG Y Y A DL+  + + +    +++IYV+ +  S + K +   A  A     
Sbjct: 313 PLIVKKSDGGYGYAATDLSAIRDRVFNLKANSLIYVVDARQSLHFKMVFETARRAGWLND 372

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
             Q   L    V L +DG P K   R G+ I L  ++DE                     
Sbjct: 373 DVQAQQLAFGTV-LGKDGKPFKT--REGETIRLVDLLDEAIDRATAVVREKAEKVGLSEQ 429

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L         FD  ++   + +  V Y+QYAYAR RSIF +A
Sbjct: 430 EIEENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSIFGKA 488

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            D  P          +   E E   +E  L +HL  +   ++       P+KLA YLY L
Sbjct: 489 GDRTP----------LAHPELELAPAERALGLHLDRFGETLDEVAAEYAPHKLAAYLYQL 538

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS++   +    + P ++   A  +++   RL L    A  ++ G+ ++G+ +P  +
Sbjct: 539 ASLYTTFYD---QCPVIK--PAPAQEVAENRLFLCDLTARTLHQGMALLGIRTPERL 590


>gi|94985140|ref|YP_604504.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555421|gb|ABF45335.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 628

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + LK  +++   ++      +D  + E P +   G   T AA  +++ LG +P  +A
Sbjct: 21  DLKAELKAAVQQAAAELGAP---VDVAIQETPANKP-GDYGTPAAFQMAKALGQNPAQVA 76

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +  ++++   +  V  AG  F+N ++        + + V + +E    +  +  KV I
Sbjct: 77  AQLAQKVRLPAGIARVEAAGP-FLNFFVD-------VGAFVRAVVEEPTRIPAQSGKVVI 128

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFW 183
           E  S NP   +HVGH R  V+GD+LA +   +G+ V  + YI+D G Q   +  A+  + 
Sbjct: 129 EHTSVNPNKELHVGHLRNVVLGDSLARIFRAAGHTVEVQNYIDDTGRQTAESLFAVKHYG 188

Query: 184 RYQQALYNNDSDLPEGY 200
           R    +   D  L EGY
Sbjct: 189 RVWDGVQKYDHWLGEGY 205



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 10/175 (5%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   +G  ++RF ML  + +  +DF + +    + +    YVQYA  R  +I R+A++  
Sbjct: 462 IARRIGIGAIRFAMLKAEPTRKIDFRWDQALALNGDT-APYVQYAAVRAANILRKAQEAG 520

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D      + +P   + D +  +++  L   P V+  A     P+ +A Y  DLA+ F
Sbjct: 521 YATDGSGADWSALP---DIDVNLAKMVARL---PEVVAQAVRVHSPHVVAQYALDLATAF 574

Query: 533 HGHWSHGREN--PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  ++   +N  P    +Q +   L   RL LV  +       L++IG++ P  M
Sbjct: 575 NAWYNAKDKNGKPATNVLQ-SPAGLREARLALVARLRKGFEETLDLIGIQVPAAM 628


>gi|75760440|ref|ZP_00740481.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218897175|ref|YP_002445586.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228900799|ref|ZP_04065014.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|74492065|gb|EAO55240.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218545741|gb|ACK98135.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228858725|gb|EEN03170.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 562

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKKYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFMKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|302535095|ref|ZP_07287437.1| arginyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443990|gb|EFL15806.1| arginyl-tRNA synthetase [Streptomyces sp. C]
          Length = 589

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 52/296 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKK 378
           PL+  KSDG + Y A DL+  + +  +    ++IYV+ +  S + K + E    A     
Sbjct: 313 PLIVQKSDGGFGYAATDLSAIRNRVTDLAATSLIYVVDARQSLHFKMVFETARRAGWLND 372

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
               V L     L +DG P K   R G+ + L  ++DE                      
Sbjct: 373 GVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVERATAVVREKAEKVGLTEAE 430

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR RSI R A 
Sbjct: 431 IVENGQYVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSIMRNAG 489

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D  P          V   E E   +E  L +HL  +  +IE A     P+KLA YLY L+
Sbjct: 490 DRKP----------VAHPELELAPAERALGLHLDGFGALIEEAAADYAPHKLAAYLYQLS 539

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S++   ++   + P L+   A+  +    RL L    A  ++ G+ ++G+ +P ++
Sbjct: 540 SLYTTFYA---DCPVLK---ADTPEQVENRLFLCDLTARTLSKGMALLGIRTPEKL 589



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 24  VEKKILDRIVIERP---------RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           VE+++ D +    P         R         N  + L++    +P  +A  ++  +  
Sbjct: 11  VEQRVSDALASALPEAGAADPLLRRSDRADFQANGILALAKKAKANPRELAATVLEGLDK 70

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              +  V ++G GF+N+ +S   + + L++        G  L G      I++   N   
Sbjct: 71  SGVIKEVEVSGPGFLNITVSDEAIIRTLAARAADD-RLGVPLNGSAGTTVIDYAQPNVAK 129

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            MHVGH R AV+G  +  ++ F+G +V R ++I D G Q   L
Sbjct: 130 EMHVGHLRSAVIGAAMVEILEFTGEKVIRRHHIGDWGTQFGML 172


>gi|228920921|ref|ZP_04084259.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838710|gb|EEM84013.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 562

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSFISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|149638964|ref|XP_001513391.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 695

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 121/565 (21%), Positives = 235/565 (41%), Gaps = 95/565 (16%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRN----LIGK 119
           A+ +  ++K D  V  +   G G +N  ++   L K +L  +     +YG      L   
Sbjct: 182 AQSLAKKLKCDTVVSEI-STGPGTVNFKINRELLTKTVLQQVFEDDSKYGLKSELFLELP 240

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV +EF S N     H GH R  ++G+ +A+L    G+ VTR  Y+ D G Q   L  
Sbjct: 241 PKKVVVEFSSPNVAKKFHAGHLRSTIIGNFIANLNEALGHRVTRINYLGDWGMQFGLLGT 300

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE--------LLNFPEEKWL 230
               + Y++ L +N    P  +   VY++ V KE AD  + E         L   +++ L
Sbjct: 301 GFQLFGYEEKLQSN----PLQHLYDVYVQ-VNKEAADDKNVEKSAHEFFRRLETGDQEAL 355

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + K +   ++   +R   K L +  D +  E  +H       ++++  L  +G + + +
Sbjct: 356 SLWKKFRDLSITDYVR-VYKRLGVHFDDYSGESFYHEKS----QEVLKLLDSKGLLQKTM 410

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
                   ++K D         S+++       ++++DG+  Y   DLA    + ++  F
Sbjct: 411 QGAAVVDLSEKGD---------SSLIC-----AVMRNDGTSLYATRDLAAAIDRMDKYHF 456

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D+MIYV       + +++  +   +  + A+     C+ V     G+   M  R GD   
Sbjct: 457 DSMIYVTDKSQRRHFQQVFQILRLMGYEWAE----RCQHVPF---GIVQGMKTRRGDVTF 509

Query: 410 LRHVVDE---------VGSDSVRFMMLWRKNSE----------------LLDFDFCKVKE 444
           L  V++E           S + + +   ++ +E                L D+ F   + 
Sbjct: 510 LEDVLNEACLRMLDNMASSKTTKGLENPQETAERVGLAALIVHDLRGLLLSDYQFSWDRV 569

Query: 445 -QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            Q++ +   ++QY +AR  S+    ++ F     + F  + + QE +     + ++ HL 
Sbjct: 570 LQTRGDTGVFLQYTHARLHSL----EETFGCAGLNGFNASCL-QEPQ----SVSILQHLL 620

Query: 504 EYPRVIENATIAQEPYKLAFYLY---DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            Y  V+  ++   +P  +  YL     LA+V H   S          ++ +  ++   RL
Sbjct: 621 RYDEVLYKSSQDLQPRHIVNYLLILSHLAAVAHKTLS----------IRNSPTEVAEARL 670

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  AV S++ SG+ ++G+    +M
Sbjct: 671 HLFKAVRSVLASGMKLLGITPVTKM 695


>gi|297622706|ref|YP_003704140.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297163886|gb|ADI13597.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 607

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 32/303 (10%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKI 101
           G   +  A  L+R L  +P  IA+ +V R+++   V      G  ++N +L P +++R +
Sbjct: 35  GDYGSPVAFGLARVLRKNPAAIAQELVERLELPAGVARAEAVGP-YLNFHLDPGAFVRGV 93

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                   +E    L  +G KV +E  S NP    HVGH R  V+GD +A ++  +GYEV
Sbjct: 94  --------VEGELALPERGKKVIVEHTSVNPNKEAHVGHLRNIVLGDAVARILRAAGYEV 145

Query: 162 TREYYINDAGAQI--NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
             + YI+D G Q   +  A+  F          D  L + Y      K    E  ++  S
Sbjct: 146 EVQNYIDDTGRQAAESLFAVGYFGATYDGAEKYDHWLGKLYVRLTQAKETDAETIERGVS 205

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           + ++  E   L       ++ +++   +   AL  ++D+ + E D  +     +   ++ 
Sbjct: 206 QTMHRLERGEL----RGEIERVLRAQLETYHALGAEYDLLVWESDIVK--SGFLARALEV 259

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336
           L R     E +  P + K      MD  +L+         ++ P   L++SDG+  Y A 
Sbjct: 260 LKRS----EDVFTPSEGKYAGALVMDVSKLI-------PGLEEPLVVLVRSDGNAMYVAK 308

Query: 337 DLA 339
           D+ 
Sbjct: 309 DIG 311



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 14/176 (7%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           V  +VG  ++RF ML  +   ++DF + + +  Q    P  YVQYA+AR  SI R A + 
Sbjct: 443 VARQVGVGALRFAMLKSEARRVIDFRWEQALSLQGDSAP--YVQYAHARACSILRAACEA 500

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                  ++ R            E++L   LA  P +I +A     P+ +  Y  D+A+ 
Sbjct: 501 GVGESGAVWER--------LGPLEVKLAQELARLPEIIGSAARDFAPHLVGQYCLDVATA 552

Query: 532 FHGHWSH--GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +++H      P  + ++A    L   RL LV  V   + + L ++G+E+P EM
Sbjct: 553 WNAYYNHRGADGKPDTQVLKAEP-GLREARLALVRKVKETLATSLGLLGIEAPEEM 607


>gi|325188174|emb|CCA22714.1| arginyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 803

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 19/181 (10%)

Query: 34  IERPRDCAHGHLSTNAAMIL-----SRPLGL-DPLTIAELIVARIKI--DPDVDS-VFIA 84
           + R ++   G    N+AM +       P  L  P  +A  I+  +K   +P + S + +A
Sbjct: 246 VTRTKNAQFGDYQCNSAMSIFTAMKGTPNALKSPRDVANAIINAMKQIENPVLQSELTVA 305

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN  L PS+L   L S++  G +          KV ++F S N    MHVGH R  
Sbjct: 306 GAGFINARLEPSFLSARLVSLLKHGAQASPET--NRIKVVVDFSSPNIAKDMHVGHLRST 363

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-----WRYQQALYNNDSDLPEG 199
           ++GD +  ++ F GY+V R  ++ D G Q   L   +      W  +Q    N +DL + 
Sbjct: 364 IIGDAICRILEFQGYDVARINHVGDWGTQFGMLICHLIDAYPTWESEQP---NVTDLTKL 420

Query: 200 Y 200
           Y
Sbjct: 421 Y 421


>gi|16120221|ref|NP_395809.1| arginine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169237481|ref|YP_001690685.1| arginine--tRNA ligase [Halobacterium salinarum R1]
 gi|23822206|sp|Q9HHN2|SYR_HALSA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|10584349|gb|AAG20944.1| arginine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167728708|emb|CAP15552.1| arginine--tRNA ligase [Halobacterium salinarum R1]
          Length = 631

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 136/329 (41%), Gaps = 54/329 (16%)

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCK 344
           YE +  P  +      D  R+       +   D D P  ++KSDGS  Y   DLA  + +
Sbjct: 327 YENVGDPQAADVDASLDRARQMREANDDLEDADFD-PFYIVKSDGSTLYGTRDLATIEYR 385

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            E    D  +YV+ ++ + Y ++L   A  +     ++  +   L+ L        MS R
Sbjct: 386 IEEYDADQSVYVVANEQNQYFQQLFVAARKMGYNDIKLKHIDYGLISLPEG----SMSTR 441

Query: 404 AGDFITLRHVVD--------------------------EVGSDSVRFMMLWRKNSELLDF 437
            G  IT R V+D                          ++   ++++ M+  K      F
Sbjct: 442 KGQIITAREVLDRAQDRAEEIIAEKGRIDDAEAQSVATKIALATIKYEMVAAKRERDTTF 501

Query: 438 DFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           D  + V  +    P  YVQYA  R  SI   A D  P++D DL P       S F+ +++
Sbjct: 502 DIDESVALEGDTGP--YVQYAATRGYSILDGA-DAAPEID-DLDP-------SVFNDTDV 550

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  LA YP V+E      +   LA YL  LA VF+  +       +   + A N +  
Sbjct: 551 ELLFELARYPLVLERCEERYDAAPLAHYLLQLAHVFNSFYH------KNAVLDAENARTE 604

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L  A   I ++GL ++G++   EM
Sbjct: 605 --RLLLTKATTQIFDNGLGLLGIDVLEEM 631



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 77  DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
           +V++V + G G IN +   + L    LS+I+  G EYG         +  +  S N   P
Sbjct: 79  EVEAVTVEG-GHINYHADTTDLADATLSTILRDGSEYGTRTDADPDTILADVSSPNIAKP 137

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           +HVGH R  ++ D + +++   G++VTR+ ++ D G Q   L
Sbjct: 138 LHVGHLRNTILSDAVMNILEARGHDVTRDNHLGDWGVQFGNL 179


>gi|297192854|ref|ZP_06910252.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151518|gb|EFH31212.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 587

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ LG +P  +A  +V  I  +  +  + ++G GF+N+ ++   + + L++
Sbjct: 41  FQANGILALAKKLGGNPRELAAKVVDAIGPNDVLGDIEVSGPGFLNITITDKAITETLAA 100

Query: 105 IVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  G+ +     G GT V I++   N    MHVGH R AV+GD +  ++ F+G +V
Sbjct: 101 RAADDRLGVPFA---AGSGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGEKV 156

Query: 162 TREYYINDAGAQINTL 177
            R ++I D G Q   L
Sbjct: 157 VRRHHIGDWGTQFGML 172



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 53/297 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KS+G Y Y A DL+  + + +  G + ++YV+ +  S + K +   A        
Sbjct: 310 PLIVKKSNGGYGYAATDLSAIRDRVQNLGANTLVYVVDARQSLHFKMVFETARRAGWLND 369

Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           ++  V L     L +DG P K   R G+ + L  ++DE                      
Sbjct: 370 KVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAIDRATAVVREKAEKVGLSEQE 427

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L         FD  ++   + +  V Y+QYAYAR +SI R+A 
Sbjct: 428 IVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSIKRKAG 486

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D  P          V   E E   +E  L +HL ++  V+     + EP+KLA YLY LA
Sbjct: 487 DRRP----------VAHPELELAPAERALGLHLDQFGEVLAEVASSYEPHKLAAYLYQLA 536

Query: 530 SVFHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S     +       +   + A+N  ++   RL LV      ++ G+ ++G+ +P  +
Sbjct: 537 SHLTTFYD------QCHVLSADNPAEVVENRLFLVDLTGRTLHQGMALLGIRTPERL 587


>gi|217959719|ref|YP_002338271.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222095806|ref|YP_002529863.1| arginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|217066344|gb|ACJ80594.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221239864|gb|ACM12574.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           Q1]
          Length = 562

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R +  N  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILNENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|157412544|ref|YP_001483410.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157387119|gb|ABV49824.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 604

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 147/659 (22%), Positives = 259/659 (39%), Gaps = 138/659 (20%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65

Query: 63  TIAE----LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI- 117
            I+     L+     I     S+ IAG GFIN+ L  +    +L + + + I+  R  I 
Sbjct: 66  DISNDFINLLNKNKSISKLCKSLEIAGPGFINIKLKDA----VLINEIKANIQCNRAGIP 121

Query: 118 --------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
                   G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D
Sbjct: 122 LIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGD 181

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----ELADKYSSELLNFP 225
            G Q   L   +     + LY+ND            L+ +GK    +L + Y      F 
Sbjct: 182 WGTQFGMLITQL-----KDLYSND------------LEEIGKIKISDLVEFYKESKKRFD 224

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALN---------------IQHDIFISEDDFHRGDP 270
            E      +  S + ++K+   D+K++                I  ++ I  ++      
Sbjct: 225 NESEF---QKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKIEERGESFY 281

Query: 271 SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----L 325
           +P ++ +ID+L  +  + E            KC       +F   M   +  +PL     
Sbjct: 282 NPFLKSLIDDLNLKKILVED--------QGAKC-------VFLDGMTNKE-GKPLPLIIQ 325

Query: 326 KSDGSYTYFAADLAYFKCKYER---GFD--NMIYVMG---SDHSGYVKRLEAVAAAVSEK 377
           K DG + Y   DLA  + ++ +   G D   +IYV     ++H   V ++   A  + E 
Sbjct: 326 KKDGGFNYATTDLAAIRYRFNQPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPEN 385

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
           + Q++ +   LV+   DG  +K   R G+ I L+ +++E                     
Sbjct: 386 R-QVDHVPFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLKDEDRYET 441

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     +G  +V++  L +       F F K+   +  N   Y+ Y   R   I R
Sbjct: 442 EEFIANTSRIIGLGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKR 500

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +   ++   D        I  E +   SE +LI  L ++  VI +      P +L  YL+
Sbjct: 501 KNDFVYDSKDL-----QYINYEHK---SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLF 552

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L   F+  +    + P L+      + + + RL L    A  +   L ++G+E+   M
Sbjct: 553 ELCQTFNRFYD---QVPILK----EEKYIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|229109648|ref|ZP_04239234.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228673689|gb|EEL28947.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
          Length = 562

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  ++ F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAIIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|145481811|ref|XP_001426928.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394006|emb|CAK59530.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 125/586 (21%), Positives = 229/586 (39%), Gaps = 133/586 (22%)

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + +A+ I A    D  +  V    KGF+ + L+  ++   ++SI+ +G+++    + K  
Sbjct: 76  VEVAQKIAATEGQDNVIQKVEAIEKGFLTIQLNNQFIEDEINSILANGLKFP---LEKKQ 132

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +++ S N    MHVGH R  ++G++L  ++ F G EV R  ++ D G Q   L   +
Sbjct: 133 KVVVDYSSPNIAKEMHVGHLRSTILGESLCRILEFQGQEVVRVNHVGDWGTQFGMLINHL 192

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
              Y     N          P +      KEL D Y      F         +++ +++ 
Sbjct: 193 LEEYPDYQTNK---------PAL------KELEDLYKEAKKKFDSN------EEFKLKSQ 231

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR--DIIDNLARQGY--VY---------- 287
             +++  L+AL                DP  I    +I +L+RQ Y  +Y          
Sbjct: 232 QFVVK--LQAL----------------DPVCIDAWKMICDLSRQEYNKIYQRLNVKITEY 273

Query: 288 -EGILPPPKSKTTQKC------DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            E    P  ++  ++C      ++D+   + R  + G+ V   ++K DG Y Y   D+A 
Sbjct: 274 GESYYNPILNEIVKECEAKGIVELDQGAKIIR--VKGEKVPLMIVKKDGGYNYDTTDMAA 331

Query: 341 FKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK---AQINVLLCELVRLYRDGM 396
            K +  E   D ++Y+       + K +   A  +   +     +  +   LV L  DG 
Sbjct: 332 AKTRILEWKCDRLLYLTDVGQWNHFKLVFEGAKLMGWHQPPNTSMEHMGFGLV-LGPDGK 390

Query: 397 PIKMSKRAGDFITLRHVVDE---------------------------------------V 417
             K   R+GD + L  ++DE                                       +
Sbjct: 391 --KFKTRSGDTVKLIDLLDEAKERALKQIQLRVQENQQGKEFSTGTALSPEEFETAAERM 448

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++++  L +      +FD+ K+ +  K N   Y+ Y+Y R  SI R++       DF
Sbjct: 449 GIAAIKYYDLKQNRISDYNFDYDKMLD-PKGNTAVYLMYSYVRMLSILRKS----GIQDF 503

Query: 478 DLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++F       E +F  +   E  L   L  +  V+++ T       L  Y+YD+      
Sbjct: 504 EVFKG-----EHKFKITHQHERHLAAQLLRFVDVLQSVTDQLAINWLCDYIYDICVKIAE 558

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            ++  R           N + T  RL L  AV  ++    +++G+E
Sbjct: 559 AYNQYR---------ILNDEHTQTRLLLCEAVKMVLLQSFHLVGIE 595


>gi|307327898|ref|ZP_07607080.1| Arginine--tRNA ligase [Streptomyces violaceusniger Tu 4113]
 gi|306886416|gb|EFN17420.1| Arginine--tRNA ligase [Streptomyces violaceusniger Tu 4113]
          Length = 341

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 21/187 (11%)

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           ++ R ++  +G D+ R+ +L     +L D D   +  Q ++N +F VQYA+AR R++ R 
Sbjct: 167 VSGRDLLTRLGPDAARWALLRPAGHDLPDLDPAHLLSQREDNALFRVQYAHARTRALMRN 226

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE---------YPRVIENATIAQEP 518
           A        F + P    PQ      SE  +  H AE         +PR IE A   + P
Sbjct: 227 AS------QFGIVPE---PQSDSGSDSEPGMYGHPAEAALLALLADHPRTIEAAARHRAP 277

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
            +LA  L  +A  F   +      P L   +     +   RL L  A  +++  GL+++G
Sbjct: 278 DRLARQLVAVADGF---FRFHDACPALPAGECKPSAVHRSRLALADAAGAVLAGGLHLLG 334

Query: 579 VESPNEM 585
           + +P  +
Sbjct: 335 ISAPEHL 341



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD----PLTIAELIVARIKIDPDVDSVFI 83
           + +R+ +  P     G  +TN A++L+   G       L IAE++  R+ +DP +  V I
Sbjct: 27  VPERVKVRIPPRPGCGDYATNVALLLASGSGDGGDGDALGIAEVLRRRLVLDPGIARVDI 86

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           AG GF+N+ L  +   +++ +++  G+ YG      G  V +
Sbjct: 87  AGPGFLNITLEGTSHAQLVRAVLSQGLRYGHGDALAGVSVPL 128


>gi|33860747|ref|NP_892308.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|39932084|sp|Q7V396|SYR_PROMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33633689|emb|CAE18646.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 603

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 172/405 (42%), Gaps = 62/405 (15%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIA----ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           G    N  ++LS+    +P  IA    E +    KI    +++ IAG GFIN+ L    L
Sbjct: 46  GDYQCNICLVLSKIYKSNPREIAIAFIETLKENKKISNLCENLEIAGPGFINIKLKNKVL 105

Query: 99  RKILSSIVV---SGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            + + S +    +G+    +N I    KV ++F S N    MHVGH R  ++GD+++ + 
Sbjct: 106 IEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSISKIF 165

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVG 210
            F GY V R  +I D G Q   L   +   Y   L   D    SDL E Y          
Sbjct: 166 EFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDRIKISDLVEFYKASKKRFDNE 225

Query: 211 KELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            E   +   E++          E W  ++ + S +   +I     K LNI+    I E  
Sbjct: 226 TEFQKRSREEVVQLQSGDKKSIEAW-KLLCNQSRKEFDQI----YKTLNIK----IKE-- 274

Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             RG+   +P ++ II++L      Y+ IL   +     KC       +F   M   + +
Sbjct: 275 --RGESFYNPFLKSIIEDLN-----YKKILIEDQG---AKC-------VFLDGMTNKEGN 317

Query: 322 -RPLL--KSDGSYTYFAADLAYFKCKYERG--FDN---MIYVMGSDHSGYVKRLEAVAAA 373
             PL+  K DG + Y   DLA  + ++ +    DN   +IYV     S +   +  VA  
Sbjct: 318 PLPLIIQKKDGGFNYATTDLAALRYRFTKEPYGDNAARIIYVTDHGQSNHFAGVFQVAKR 377

Query: 374 VS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +   K  ++N +   LV+   DG   K+  R GD I L+ ++ E
Sbjct: 378 ANWIPKDCEVNHVPFGLVQGI-DGK--KLKTREGDTIKLKDLLSE 419


>gi|197106356|ref|YP_002131733.1| arginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690131|sp|B4R8T9|SYR_PHEZH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|196479776|gb|ACG79304.1| arginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 593

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 135/600 (22%), Positives = 230/600 (38%), Gaps = 104/600 (17%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
             +N A+  ++ +G +P  IA  +  R++ DP + SV IAG GF+NL ++ + L     +
Sbjct: 39  FQSNGALAAAKRVGKNPREIATAVAGRLQGDPRLASVEIAGPGFLNLKVADAALAARADA 98

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           I       G   +    +V +++   N   PMHVGH R +++G+++  L  F G  V  +
Sbjct: 99  IAAD-PRAGAGTVPAPRRVIVDYGGPNVAKPMHVGHLRASIIGESVKRLYRFRGDTVIGD 157

Query: 165 YYINDAGAQINTLALSVFWRYQQ--ALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSE 220
            +  D G Q+  L  +V     +  AL +  N S  P G  P  + +    +L   Y   
Sbjct: 158 AHFGDWGYQMGLLIGAVCDEDAEIRALVDQLNASGDPNGEIPAAFERVTLADLDRLYP-- 215

Query: 221 LLNFPEEKWLPIVKDYS------VQA-------MMKIIRD--------DLKALNIQHDIF 259
            L   + K  P  +D +      +QA       + +  RD        D  AL +  D +
Sbjct: 216 -LAAAKGKEDPAYRDRARKLTADLQAHKPGCYLLWRRFRDVTQVALERDFHALGVDFDWW 274

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E D        I+ ++  LA +G + +                D+   + R    GD 
Sbjct: 275 KGESDVDH----LIQPMVAELADKGLLVD----------------DQGARIVRVAREGDK 314

Query: 320 VDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYV-----MGSDHSGYVKRLEAVA 371
            + P   ++ S+GS  Y   DLA      +R FD  + +       +DH   V R   +A
Sbjct: 315 RELPPLLVVSSEGSAMYGTTDLATI-LDRKREFDPQLVIYCVDQRQADHFEIVFRAAYLA 373

Query: 372 AAVSE-------------------KKAQINVL-LCELVRLYRDGMPIKMSKRA-GDFITL 410
               E                   K  +  VL L +L+ + R     ++ +   G+ +  
Sbjct: 374 GYAEEGQLEHIGFGTMNGTDGKPFKTREGGVLKLADLIEMTRSKARERLHEAGLGEDLPA 433

Query: 411 RHVVDEVGSDSVRFMML-----WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
               D  G  +V  +       +R  S + D D     E  K  P  Y+ Y   R +S+ 
Sbjct: 434 EEFEDIAGKVAVAALKFADLSNFRGTSYVFDLDRFTSFE-GKTGP--YLLYQAVRVKSLL 490

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A+           P  V       + +E  L++ L  +   ++ A   + P  LA + 
Sbjct: 491 RKAEAEGAQAG----PVTVA------EPAERDLVLTLDAFETALQEAYDKKAPNALAEHA 540

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y L+  F   ++     P L    A    +   RL L  A    +   L+I+G+  P  M
Sbjct: 541 YRLSQAFSKFYA---ACPIL----AAPPPVRGSRLTLAQATLRQLELALDILGIAVPERM 593


>gi|126466471|ref|YP_001041580.1| DALR anticodon binding domain-containing protein [Staphylothermus
           marinus F1]
 gi|126015294|gb|ABN70672.1| DALR anticodon binding domain protein [Staphylothermus marinus F1]
          Length = 770

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           G+IN Y+  + ++ I+    +S   + +    GKG K+ +E  SANP  P+HVG  R AV
Sbjct: 101 GYINFYIDYNLMKDIIFENYLSKKIFDQIKSFGKGEKIVVEHTSANPVHPLHVGSGRNAV 160

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G+T A+L+ + G+ V   +Y+ND G Q+  L 
Sbjct: 161 IGNTYANLLRYLGFNVEERFYVNDMGRQVAVLV 193


>gi|47570082|ref|ZP_00240741.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553243|gb|EAL11635.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 562

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 79/312 (25%)

Query: 316 VGDDVDRPLL--KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +G++   P L  KSDG+  Y   DL A    +   GFD  +YV+G + S +         
Sbjct: 288 LGEEGMPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN------- 340

Query: 373 AVSEKKAQINVLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----- 416
                  Q   +L +L   + DGM   P         KMS R G  I L  V++E     
Sbjct: 341 -------QFFTVLKKLGYTWGDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELA 393

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFY 453
                               VG  +V F  L  KN  + + +F     +K + +  P  Y
Sbjct: 394 KQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--Y 449

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A 
Sbjct: 450 VQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAF 498

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  ++ Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  G
Sbjct: 499 NKNEPSVISKYVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEG 550

Query: 574 LNIIGVESPNEM 585
           L ++GVE+P EM
Sbjct: 551 LRLLGVEAPEEM 562



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
            +K+IL+  +IE P+    G  +      L++     P  IA+ +  ++  DP    V  
Sbjct: 20  TQKQILE--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIAKEVAQKLS-DPFFTKVEA 75

Query: 84  AGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            G  ++N++ +   +   +L +I+    EYG N  G    V I++ S N   P  +GH R
Sbjct: 76  VGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGCEKTVVIDYSSPNIAKPFSMGHLR 134

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             ++G++L  +    GYEV    YI D G Q   L
Sbjct: 135 STMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|228907938|ref|ZP_04071789.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228851697|gb|EEM96500.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 562

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + +   S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFAL--------KGDHSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLEEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V  AG  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-DPFFTKV-EAGGPYVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|32473878|ref|NP_866872.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|39932074|sp|Q7URC7|SYR_RHOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|32444414|emb|CAD74413.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 671

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)

Query: 36  RPR-DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           RP  D   G   +NAAM L++ +G     +A  +V  + +    +   +AG GFINL L 
Sbjct: 30  RPAADPKFGDYQSNAAMPLAKRVGKTSRDVAAELVQNLNVTDLFEEPEVAGPGFINLRLK 89

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S L   +  +++     G +      KV ++F S N   PMHVGH R  V+GD LA  +
Sbjct: 90  DSVLFDSIQQMLLDE-RVGVSKTTDPKKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTL 148

Query: 155 AFSGYEVTREYYINDAGAQINTL 177
            F G +V  + ++ D G Q   +
Sbjct: 149 RFYGEDVVTDNHLGDWGTQFGII 171



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 48/303 (15%)

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D P++  K DG++ Y   DLA  + +  E   D ++YV+ S    + K+  A+A  +   
Sbjct: 379 DSPMIIQKRDGAFLYATTDLATLQYRRDEFQPDEILYVVDSRQGEHFKKFFAMAEPLGMA 438

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
           + Q+ V +     L  DG P+K   R+G  I L  ++++                     
Sbjct: 439 EVQL-VHVNFGTVLGPDGRPMKT--RSGSLIGLESLLNDAVSRAKEVVCNPDRLATMDPP 495

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  ++++  L    +    FD  K+    + N   YVQY+YAR +SI
Sbjct: 496 MGGEEQQQIAEIVGIGAIKYADLSHHRTSDYKFDVDKMVAL-EGNTATYVQYSYARTQSI 554

Query: 465 FRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            R+A D    P  +  +         +    +E  L + L  +   IE   +   P  L 
Sbjct: 555 LRRASDGEGLPAFEQAIEQAAATQPMTFTHPNERSLALMLMRFEEAIEQVRLNYAPNALC 614

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++ A  +         N   R +  ++  +   RL LV     ++  GL+++G++  
Sbjct: 615 DYLFETAKTYSSF------NESCRVLGNDDPAVMQTRLALVVLTGRVLKKGLSLLGIDVA 668

Query: 583 NEM 585
             M
Sbjct: 669 ERM 671


>gi|332982126|ref|YP_004463567.1| arginine--tRNA ligase [Mahella australiensis 50-1 BON]
 gi|332699804|gb|AEE96745.1| Arginine--tRNA ligase [Mahella australiensis 50-1 BON]
          Length = 449

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 28/192 (14%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77
           I C+   E K+       + RD  +G   TN  + + R        IA  ++    I   
Sbjct: 29  ITCRNAYEVKV------NKTRDIKYGDFYTNMPIEMVRLTARPSDYIARTLLEHADISGT 82

Query: 78  -VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            +D + IAG GFIN++L P +   +L+ I+    EYGR  IG   KV I F    P   M
Sbjct: 83  YIDRMEIAGSGFINIFLKPKWFYDVLTLILKERDEYGRVDIGDNRKVLIGF----PDIDM 138

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA--QIN--TLALSVF------WRYQ 186
           +       V GD +A+++  +GYEV RE Y+N   +  +IN   + L ++      W Y+
Sbjct: 139 Y-----SIVWGDCVANILETAGYEVLRECYVNSHKSMREINDEIVNLRLYGVVLSSWFYE 193

Query: 187 QALYNNDSDLPE 198
           Q LY  DSDL E
Sbjct: 194 QQLY--DSDLQE 203



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 54/272 (19%)

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D    L+  +G +T  A  +AY++ K ++ G+D +I  +G           A A      
Sbjct: 226 DTHGALILKEGRFTNIAMRMAYYRRKIFKEGYD-LIIEIGD---------RASADTFETV 275

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           +  +  L CEL  +     P        D+    H+++ +G D++RF++           
Sbjct: 276 REAMICLGCELEHMEYLVSP--------DY---SHLLENIGRDALRFLL----------- 313

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT---- 493
                +++  ++ +F VQYAYAR  SI R      P+    L P    P+E +F      
Sbjct: 314 --SSSRDKEDDDSLFEVQYAYARICSILRHMD---PN-RLALMP----PEEIDFSMLRHP 363

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +E  L+  L + P  +  A   ++P  L  YL D+A +FH  +   R       V+ NN 
Sbjct: 364 AEQALMRCLPDLPHKVRLAAQCRQPAILTDYLVDVADLFHKFYDECR-------VRINNN 416

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L   RL L+ A   ++ +GL I+ +++P  +
Sbjct: 417 DLMYARLGLLEAARVVLANGLYILNIDAPERL 448


>gi|41615001|ref|NP_963499.1| hypothetical protein NEQ208 [Nanoarchaeum equitans Kin4-M]
 gi|40068725|gb|AAR39060.1| NEQ208 [Nanoarchaeum equitans Kin4-M]
          Length = 537

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 121/525 (23%), Positives = 209/525 (39%), Gaps = 115/525 (21%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +++ S N   P HVG+ R A++G+ L +++   GY V    +  D G Q   L       
Sbjct: 64  LDYFSPNIGKPPHVGNLRSAIIGNPLKNILRKVGYNVISINWWGDFGTQFGELI------ 117

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y      ++ +L +   P   +KH+  EL   ++ EL   PE      +K+Y+       
Sbjct: 118 YAFKTKGDEKELRKN--P---IKHLF-ELYTWFNRELEKNPE------IKNYA------- 158

Query: 245 IRDDLKALN--IQHDIFISEDDFHRGDPSPIRDIIDNLARQ---------------GYVY 287
            R++ K L   +   I I    F  G   P+ +++ N  R+                Y+ 
Sbjct: 159 -REEFKYLEEAMYKGIQIDVSPFFEG--KPLSELLKNKTREEQNYILWKIFREITIKYMR 215

Query: 288 EGILPPPK---------SKTTQKCDMDRKQLLFRSTMVGDD----VDRP-----LLKSDG 329
           E   P  K         S   +K     K+LL +     D     V  P     LLKSDG
Sbjct: 216 EQFYPKLKLEFDEESGESFFLKKAKEVAKELLEKGVAEEDKNSIIVRTPYGVALLLKSDG 275

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCE 387
           +  Y   DLA     YE+  FD  IYV+ ++ S +  +L  +A   +   A ++  L   
Sbjct: 276 TTLYLTRDLAAAIEHYEKYKFDKKIYVVANEQSQHFNQLIYIAKKANYPFADKLYHLKFG 335

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
           L+ L  +    K S R G  +    ++++                           +G  
Sbjct: 336 LLLLKTEEGVKKFSTRKGRAVFAEDILEKAYELAKEEILKRNKDKPLEEIEKNAKIIGYG 395

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V + ++     + + FD+ K+   + +  VF +QY+  R + I  +             
Sbjct: 396 AVIYAIVRYDPKKDIIFDWDKILSLNGKTSVF-IQYSAVRAKHILDKY------------ 442

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               I + +  +  E +L++ L  Y  V+E +    +P  LA YLY+LA  F+  +   R
Sbjct: 443 -NKPIERPNNLEKDEERLLLWLFYYYAVLEESARKLKPNILAEYLYNLAEEFNRFYEKNR 501

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V  +NR+    R+ LV+    I+  GLN++G++ P  M
Sbjct: 502 -------VIGSNRE--KERVWLVNKTYQILKEGLNLLGIDVPTFM 537


>gi|327542711|gb|EGF29180.1| arginyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 671

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)

Query: 36  RPR-DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
           RP  D   G   +NAAM L++ +G     +A  +V  + +    +   +AG GFINL L 
Sbjct: 30  RPAADPKFGDYQSNAAMPLAKRVGKTSRDVAAELVQNLNVTDLFEEPEVAGPGFINLRLK 89

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S L   +  +++     G +      KV ++F S N   PMHVGH R  V+GD LA  +
Sbjct: 90  DSVLFDSIQQMLLDE-RVGVSKTTDPKKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTL 148

Query: 155 AFSGYEVTREYYINDAGAQINTL 177
            F G +V  + ++ D G Q   +
Sbjct: 149 RFYGEDVVTDNHLGDWGTQFGII 171



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 48/303 (15%)

Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D P++  K DG++ Y   DLA  + + +    D ++YV+ S    + K+  A+A  +   
Sbjct: 379 DSPMIIQKRDGAFLYATTDLATLQYRRDEFHPDEILYVVDSRQGEHFKKFFAMAEPLGMG 438

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
           + Q+ V +     L  DG P+K   R+G  I L  ++++                     
Sbjct: 439 EVQL-VHVNFGTVLGPDGRPMKT--RSGSLIGLESLLNDAVSRAKEVVCNPDRLATMDPP 495

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  ++++  L    +    FD  K+    + N   YVQY+YAR +SI
Sbjct: 496 MGGEEQQQIAEIVGIGAIKYADLSHHRTSDYKFDVDKMVAL-EGNTATYVQYSYARTQSI 554

Query: 465 FRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            R+A D    P  +  L         +    +E  L + L  +   IE   +   P  L 
Sbjct: 555 LRRASDGEGLPTFEQALEQAAATQPMTFTHPNERSLALMLMRFEEAIEQVRLNYAPNALC 614

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++ A  +         N   R +  ++  +   RL LV     ++  GL+++G++  
Sbjct: 615 DYLFETAKTYSSF------NESCRVLGNDDPAVMQTRLALVVLTGRVLKKGLSLLGIDVA 668

Query: 583 NEM 585
             M
Sbjct: 669 ERM 671


>gi|229079375|ref|ZP_04211917.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228703908|gb|EEL56352.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 562

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K    RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDG--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229127604|ref|ZP_04256593.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|228655681|gb|EEL11530.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 562

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  R+ LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RIALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|157820403|ref|NP_001100113.1| probable arginyl-tRNA synthetase, mitochondrial [Rattus norvegicus]
 gi|149045596|gb|EDL98596.1| arginyl-tRNA synthetase-like (predicted) [Rattus norvegicus]
 gi|165971667|gb|AAI58745.1| Arginyl-tRNA synthetase 2, mitochondrial [Rattus norvegicus]
          Length = 578

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 237/572 (41%), Gaps = 109/572 (19%)

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG---- 113
           LD    A+ +  ++K D  V ++  AG   +N  ++ + L K +L  +   G +YG    
Sbjct: 59  LDTQDQAQRLAEKLKCDTVVTAI-SAGPRTLNFKINRALLTKAVLQQVTEDGSKYGLKSE 117

Query: 114 --RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
              +L  K  ++ +EF S N     HVGH R  ++G+ +A+L    G++VTR  YI D G
Sbjct: 118 LFSDLPQK--RIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWG 175

Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL---L 222
            Q   L      + Y++ L  N    P  +   VY++ V KE  D     K + E    L
Sbjct: 176 MQFGLLGTGFQLFGYEEKLQAN----PLQHLFDVYVQ-VNKEATDDKNVTKLAHEFFHRL 230

Query: 223 NFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              + + L +    +D S++   +I     K L I  D + S + F+R     +  ++D+
Sbjct: 231 ELGDTQALALWQRFRDLSIEEYTQIY----KRLGIYFDEY-SGESFYREKSQDVLKLLDS 285

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                   +G+L    +K     D+     L     V        ++SDG+  Y   DLA
Sbjct: 286 --------KGLLQKT-AKGNVVVDVSETGDLSSVCTV--------MRSDGTSLYATRDLA 328

Query: 340 ---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
              + K KY   FD MIYV       + +++  +   +  + A+     C+ V     G+
Sbjct: 329 AAIHRKDKY--NFDTMIYVADKGQKRHFQQVFQMLKIMGHEWAE----RCQHVPF---GI 379

Query: 397 PIKMSKRAGDFITLRHVVDEVGS---------DSVRFMMLWRKNSE-------------- 433
              M  R G+   L  V++EV S          + + M   R+ +E              
Sbjct: 380 VKGMKTRRGEVTFLEDVLNEVQSRMLQNMASIKTTKKMENPRETAEKVGLAALIIQDFRG 439

Query: 434 --LLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             L D+ F   +  QS+ +   ++QY +AR  S+    ++ F     + F  NV   +  
Sbjct: 440 LLLSDYQFSWDRVFQSRGDTGVFLQYTHARLCSL----EETFGCGYLNDF--NVACLQEP 493

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRF 547
              S LQ   HL  +  V+  A+   +P  +  YL     LA+V H              
Sbjct: 494 QSVSILQ---HLLRFDEVLYTASQDLQPKHIVSYLLTLSHLAAVAHKTLQ---------- 540

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           V+ +  ++   RL L  AV S++ +G+ ++G+
Sbjct: 541 VKDSPPEVAGARLHLFKAVRSVLANGMKLLGI 572


>gi|168014459|ref|XP_001759769.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688899|gb|EDQ75273.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 606

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 3/106 (2%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPM 136
            DSV +AG GF+N+ LS  ++ K L  ++  G+ E+   L  K  +V ++F S N    M
Sbjct: 103 TDSVSVAGPGFVNIKLSDRWIEKKLHQLLSHGVGEWAPALSYK--RVVVDFSSPNIAKEM 160

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           HVGH R  ++GD+L  ++ + G EV R  ++ D G Q   L   +F
Sbjct: 161 HVGHLRSTIIGDSLCRMLEYCGVEVLRRNHVGDWGTQFGMLIEYLF 206


>gi|296502777|ref|YP_003664477.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296323829|gb|ADH06757.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 562

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  R+ LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RIALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
            +K+ILD  +IE P+    G  +      L++     P  IA+ +  +   DP    V  
Sbjct: 20  TQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIAKEVAEKFN-DPFFTKVEA 75

Query: 84  AGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            G  ++N++ +   +   +L +++    E+G+N  G    V I++ S N   P  +GH R
Sbjct: 76  VGP-YVNVFFNRETVSDAVLKTVLGEKEEFGQNHFGCEKTVVIDYSSPNIAKPFSMGHLR 134

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             ++G++L  +    GYEV    YI D G Q   L
Sbjct: 135 STMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229155777|ref|ZP_04283883.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228627763|gb|EEK84484.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 562

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKLS-DPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|317123532|ref|YP_004097644.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315587620|gb|ADU46917.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 586

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
           +  NAA+ L + +G  P  +A  IVA + +D   + V ++G GF+N+  S ++L  +L+ 
Sbjct: 39  VQVNAALALGKKVGAAPRDVAARIVAALDLDGVAEKVEVSGPGFVNITFSDAWLASLLAD 98

Query: 105 I-----VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +     +   +E  +N       + I++ + N    MHVGH R  +VGD+LA  +   G+
Sbjct: 99  VDQDDRLGVPVEEPQN-------IPIDYSAPNVAKEMHVGHLRTTIVGDSLARTLEHLGH 151

Query: 160 EVTREYYINDAGAQINTL 177
            V R+ +I D G     L
Sbjct: 152 HVIRQNHIGDWGTPFGML 169



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 45/292 (15%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA------ 373
           PL+  KSDG Y Y   DLA  K +  + G   ++YV+G+  + ++  +   A        
Sbjct: 311 PLIIRKSDGGYGYPTTDLATIKYRVGDLGAHRVLYVIGAPQALHLNMVWDTARLAGWLPD 370

Query: 374 -VSEKKAQINVLLCELVRLY--RDGMPIKMSKRAGDFIT-LRHVVDE------------- 416
            V+    QI  +L E  ++   R G  +++     + +   R ++DE             
Sbjct: 371 DVTPVHIQIGNVLGEDRKILKTRSGSSLRLMALLDEAVAKARGLIDETRPDLSEEERATI 430

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L   ++    FD  ++   +  N   Y+QY  AR RSIFRQA     
Sbjct: 431 ARQVGIGAVKYADLSVAHNSEYVFDLDRMVSLTG-NTGPYLQYVVARVRSIFRQAG---- 485

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                L P       +     E  L   L  +  V+       EP++L  YL++LA  F 
Sbjct: 486 -----LDPLTQHAPITLGTPHERALGQQLLGFGDVVTEVGAEYEPHRLCGYLFELAQAFS 540

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +    EN     ++A   +L   RL L   V   + +GL+++G+ESP +M
Sbjct: 541 AFY----EN--CPVLKAETPELRESRLTLSALVLRTMVTGLDLLGLESPEQM 586


>gi|182414382|ref|YP_001819448.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841596|gb|ACB75848.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 590

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLS 94
           R  D  HG    N  +  ++    +P  +AE +VA +  +      V IAG GFIN  L+
Sbjct: 34  RVADAQHGDYQANGVLGYAKSRKQNPRALAEKLVAALPAEFTQSTRVTIAGPGFINFTLA 93

Query: 95  PSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           P  L   L +   +  +  G      G    +++ S N    MHVGH R AV+G+ +  L
Sbjct: 94  PGSLLAWLRTYATAEQLAAGAAADHAGQTWVVDYSSPNTAKQMHVGHLRSAVIGEAICRL 153

Query: 154 MAFSGYEVTREYYINDAGAQINTL 177
           +AF+G  V R+ ++ D G Q   L
Sbjct: 154 LAFTGARVIRDNHLGDWGTQFGKL 177



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R + + VG  +V++  L +  S    F + K+    + N   Y+ YA AR  SIFR+A  
Sbjct: 430 RAIAEAVGVGAVQYADLSQNRSSNYVFSWEKMLSL-EGNTAPYLLYAVARIHSIFRKAGA 488

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              +      P            +E+ L   L ++P  +  AT    P+ L+ YL++LA 
Sbjct: 489 TPGE------PATESAATEPETPTEIALARKLLKFPDAVRLATETLRPHFLSLYLFELAG 542


>gi|2415551|emb|CAA04301.1| arginyl-tRNA synthetase [Campylobacter jejuni]
          Length = 97

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           A  G++N  +S ++L ++ +  + +  ++ +    K + + +E+VSANPTGP+H+GH R 
Sbjct: 13  AVNGYLNFRISKTFLNELANQALTNPNDFTKGEKNKESFL-LEYVSANPTGPLHIGHARG 71

Query: 144 AVVGDTLASLMAFSGYEVTREYYIND 169
           AV GDTL  L    GY+   EYY+ND
Sbjct: 72  AVFGDTLTRLARHLGYKFNTEYYVND 97


>gi|320538434|ref|ZP_08038301.1| arginyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320144696|gb|EFW36445.1| arginyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 594

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 132/610 (21%), Positives = 250/610 (40%), Gaps = 115/610 (18%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP---DVDSVFIAGK 86
           D+I +E P +   G +        ++ L   P  IA  + A ++ +P   D+ +V I G 
Sbjct: 34  DQITMEVPPNPEMGDVGF-PLFPFAKLLRAAPAKIAADVHALLQKNPALKDMGTVKIIGP 92

Query: 87  GFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            +IN++L    +  K L +++  G  YG+    KG K+ +EF S N   P+H+GH R   
Sbjct: 93  -YINVFLPKDKIAEKTLRAVIEQGKNYGKTESLKGKKIMVEFSSPNTNKPLHLGHLRNDA 151

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNNDSDLPE--GYY 201
           +G++++ +  F G +V +   IND G  I  + LA   F          D   PE  G  
Sbjct: 152 IGESISRIFEFCGADVYKVNIINDRGVHICKSMLAYMKF---------ADGKTPESLGIK 202

Query: 202 PGVYLKHV----------GKELADKYSSELL------NFPE--EKWLPIVKDYSVQAMMK 243
           P  ++  +            E A++ + ELL      + PE  E W  +  D+++Q    
Sbjct: 203 PDRFVGEMYVRFNTYSKENPEKAEQEAQELLRSWEAGDKPEVLELWRKM-NDWAIQG--- 258

Query: 244 IIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLAR-------QGYVYEGILPPPK 295
            I+   +   +  D ++   + + +G      ++++ LA+        G ++  + P   
Sbjct: 259 -IKQTYERTGVSFDKLYFESETYLKGR----EEVLEGLAKGLFYKEEDGSIWVDLSP--- 310

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                   +D+K                LL+ DG+  Y   D      ++ +  FD +IY
Sbjct: 311 ------IKLDKKV---------------LLRGDGTALYITQDFGTAIFRHNDWPFDRLIY 349

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQ---------IN-------------VLLCELVRLY 392
           V+G++   + K L  V   +    A+         +N             V   +L+   
Sbjct: 350 VVGNEQEYHFKVLFYVLGLLGYDWAKNLYHLSYGMVNLPEGKMKSREGTIVDADDLINSL 409

Query: 393 RDG--MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KEN 449
           RD     I+   R+      + V +++   ++ + +L  + S   D  F   +  S   N
Sbjct: 410 RDAALAEIEQKGRSEAVGDPKEVAEKIALAALHYFLL--QVSPKKDMLFNPQESLSFNGN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QY  AR  SI ++A+    +    +   +V P     + SE  L+  + ++P+ +
Sbjct: 468 TGPYLQYMGARITSILKKAET--EEGKQSISGGSVKPALLTHE-SEWTLLKTIEDFPQQV 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    +   +  YLY+L+  F   +    + P    + A N  L + RL+L  AV  +
Sbjct: 525 SRAADQYDSSIVTAYLYELSKNFSRFY---HDCP---ILSAGNADLAVTRLELARAVKIV 578

Query: 570 INSGLNIIGV 579
           + + + ++ V
Sbjct: 579 LENAVRLVLV 588


>gi|297526805|ref|YP_003668829.1| Arginine--tRNA ligase [Staphylothermus hellenicus DSM 12710]
 gi|297255721|gb|ADI31930.1| Arginine--tRNA ligase [Staphylothermus hellenicus DSM 12710]
          Length = 770

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 5/124 (4%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAG----KGFINLYLSPSYLRKILSSIVVSGIEYGR- 114
           D  TIA  I++ ++    +D  ++       G+IN Y+  + ++ +L    +S   + + 
Sbjct: 70  DWETIASKIISYLENRGLLDKCYVRKAEYVNGYINFYIDYNLMKNVLFENYLSMKIFDQI 129

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              G G KV +E  SANP  P+HVG  R AV+G+T A+L+ + G+ V   +Y+ND G Q+
Sbjct: 130 KSFGDGEKVVVEHTSANPVHPLHVGSGRNAVIGNTYANLLRYMGFNVEERFYVNDMGRQV 189

Query: 175 NTLA 178
             L 
Sbjct: 190 AVLV 193


>gi|229167047|ref|ZP_04294791.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228616400|gb|EEK73481.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 562

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  YE  FD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYNWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ N  K +  RL L + V  ++  GL ++GVE+P 
Sbjct: 509 YVLDVAQAFNKYYGN------VRILEENEEKES--RLALAYTVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L  I+    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|15639817|ref|NP_219267.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026055|ref|YP_001933827.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094412|sp|O83803|SYR_TREPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689346|sp|B2S469|SYR_TREPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3323142|gb|AAC65797.1| arginyl-tRNA synthetase (argS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018630|gb|ACD71248.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060187|gb|ADD72922.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 589

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 117/607 (19%), Positives = 251/607 (41%), Gaps = 100/607 (16%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI--AGKGF 88
           ++V+E P +   G ++     + ++ +   P  +A+ +   ++ D  + +     A   +
Sbjct: 31  QLVMEEPPEPGMGDIAF-PLFLFAKRVRRSPAQLAQQLCTLLEEDTSMCAYGTPQARGPY 89

Query: 89  INLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N++L+   +    L +I   G  YG     +G ++ +EF S N   P+HVGH R   +G
Sbjct: 90  LNVFLNKECVAAHTLDAIFAQGERYGHTQYLQGKRIMVEFSSPNTNKPLHVGHLRNNAIG 149

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           ++L+ ++AF G +V +   IND G  I   ++  + ++        + +    + G +  
Sbjct: 150 ESLSRIIAFCGADVFKVNIINDRGVHICK-SMCAYQKFAHGKTPAHTGIKSDRFVGDWYV 208

Query: 208 HVGKELADKYSSELLNFPEE----------KWLPIVKDYSVQAMMKI--------IRDDL 249
                  ++Y+ +   +PEE          +W     D  V+A+ +         I+   
Sbjct: 209 QF-----NRYAQQ---YPEEAEHDVRDLLQRWES--ADPHVRALWRTMNEWALRGIKQTY 258

Query: 250 KALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +   I  D ++   + + +G     R+ +      G  Y+               M+   
Sbjct: 259 ERTGISFDKLYFESETYTKG-----REEVRRGLACGVFYQ---------------MEDNS 298

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKR 366
           +    + +G D  + LL+SDG+  Y   D+  A F+ + +  FD ++YV+G++ + + K 
Sbjct: 299 IWVDLSSLGLD-KKALLRSDGTTMYITQDIGTAIFRAQ-DWPFDQLLYVVGNEQNYHFKV 356

Query: 367 LEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------ 419
           L  V   +    A Q++ +   +V L       +M  R G  +    ++D + S      
Sbjct: 357 LFFVLRLLGYPWAQQLHHVSYGMVNLPHG----RMKSREGTVVDADDILDRLHSAAEEEI 412

Query: 420 ------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYA 459
                 ++++      +N  +    +  ++   +++ VF              Y+QY  A
Sbjct: 413 AKKGRENALKHAQCIAENVAIAALHYFLLQVSPQKDMVFHPEESLSFNGNTGPYLQYMGA 472

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518
           R  S+ ++ ++   D++    PR V    +     +E +L+  LA +P  +  A    +P
Sbjct: 473 RISSLLKKVQE---DVE-QKGPREVRCDPALLTHEAEWELVKALARFPACVTRAAQGHDP 528

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +  YLY L+  F   +    + P L   + +       RL+LV AV  ++ + + ++ 
Sbjct: 529 SVITGYLYTLSKSFSRFY---HDCPILCEARPD---YACARLELVRAVRIVLRTAMRLVL 582

Query: 579 VESPNEM 585
           +    EM
Sbjct: 583 IPFLEEM 589


>gi|124028037|ref|YP_001013357.1| arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978731|gb|ABM81012.1| Arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 661

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 79  DSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           D +F+  +G++N+ L+ +   K I ++  + G  YG     K  ++ IE  SANP  P+H
Sbjct: 86  DVLFV--RGYLNIKLNAAEAAKLIFNAARLDGESYGIIKTDKPMRIVIEHTSANPVHPLH 143

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +GH R A +GDTLA ++   G+ V   +YIND G Q+  +A
Sbjct: 144 IGHARNASLGDTLARMLRARGHVVQTRFYINDLGRQVAVMA 184



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 128/301 (42%), Gaps = 47/301 (15%)

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           +D D P   L +SDG+  Y   D+AY   K+ E   D +  V+ ++      ++     A
Sbjct: 375 EDYDVPPLILQRSDGTTLYTTRDIAYSIKKFREFNADKVYNVIAAEQRLEQLQVRLALIA 434

Query: 374 VSEKKAQINVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
           +  ++  +N +    E+V L       KMS R G ++TL  +V++               
Sbjct: 435 LGYRREGLNTIHYAYEMVNLPGQ----KMSGRRGRYVTLDELVEQAIRVAREEVEKRSPH 490

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  ++R+ ++     + + FD  +     + N   Y+ YA+AR  SI
Sbjct: 491 LSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFER-NSAPYIMYAHARASSI 549

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             +A +    LD++    ++    +E +     LI+    YP +   A    +P  +  +
Sbjct: 550 LSKAAERGISLDWE----SIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPELIVAF 605

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L  LA +F+  ++ G        V   ++   M +L +V+ V +I+ SGL ++G+E    
Sbjct: 606 LNKLADLFNKWYASGDS-----VVNEPDKGKQMFKLAMVYTVKNIVASGLRLLGIEPIER 660

Query: 585 M 585
           M
Sbjct: 661 M 661


>gi|303278782|ref|XP_003058684.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459844|gb|EEH57139.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 580

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + ++  SG  YG      G +  IE  S+NP  P+H+G+ R  ++G  LA L A  GY+V
Sbjct: 1   MDAVAASGETYGHTNAAGGKRCIIEHTSSNPNAPLHIGNLRNVIIGAHLAKLQAACGYDV 60

Query: 162 TREYYINDAGAQINTLALS 180
            + +Y+ND GAQI   AL+
Sbjct: 61  KQAFYVNDLGAQIGLTALA 79


>gi|65319476|ref|ZP_00392435.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 562

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG+ +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L + P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKXPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229144803|ref|ZP_04273200.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228638525|gb|EEK94958.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
          Length = 562

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRAILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++IE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  R+ LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RIALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   D     V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DTFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|195041309|ref|XP_001991229.1| GH12545 [Drosophila grimshawi]
 gi|193900987|gb|EDV99853.1| GH12545 [Drosophila grimshawi]
          Length = 668

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 125/597 (20%), Positives = 239/597 (40%), Gaps = 101/597 (16%)

Query: 43  GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM L + L   G++  P  IA  I       P +  + +AG GFIN++LS  Y
Sbjct: 119 GDYQCNNAMGLVKKLKEAGINKSPREIAAEIQKCCPDSPIIKKIEVAGAGFINVFLSKEY 178

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               + +++  G++  R       +V ++F S N    MHVGH R  ++G++++ L+ F 
Sbjct: 179 AVNSIINMLRDGVKPPR---VPRKRVLVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFM 235

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
            ++V R  ++ D G Q   L   +    +    N  ++ P    P   L+   KE   ++
Sbjct: 236 QHDVIRINHLGDWGTQFGMLIAHL----EDCFPNFVNESP----PIGDLQEFYKESKKRF 287

Query: 218 SSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++  NF +  +  +V   S         Q +  + R + + +  + D+ I+E    RG+
Sbjct: 288 DAD-DNFKKRAYNRVVSLQSGDPKSTKAWQLICDVSRKEFQKIYDRLDVTITE----RGE 342

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
                 ++            I+   +SK   + D  R+ +    +  G  +   ++KSDG
Sbjct: 343 SFYQSRML-----------AIVELLRSKNLLELDEGREIMWTDDSKSG--IPLTVVKSDG 389

Query: 330 SYTYFAADLAYFKCKYERGFD-NMIYVMGSDHSGYVKRLEAVAAAVS--------EKKAQ 380
            +TY  +D+A  + + E      +IYV+ S  S +   +   A                Q
Sbjct: 390 GFTYDTSDMAAIRHRIEEDLAIWIIYVVDSGQSTHFNTIFKAAERCGILNPNVHRVDHVQ 449

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             V+L E      DG   K   R+GD + L  ++DE    S++ +    ++  L   +  
Sbjct: 450 FGVVLGE------DGKKFKT--RSGDTVKLSDLLDEGMKYSLKQLQERGRDQILTHTELV 501

Query: 441 KVKE----------------------------QSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + +E                              + N   Y+ Y Y R  SI R + + F
Sbjct: 502 EAQEAVAYGCIKYTDLCHNRISDYVFSFEKMLDDRGNTAVYLLYTYTRICSIARNSGEDF 561

Query: 473 PDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            ++   L   N+     E D   E +L   L ++  V+         + L  + Y++ S 
Sbjct: 562 SNVAAILDKYNL-----ELDHEKEWKLAKTLLKFHDVLIKCANGLFLHFLCEFCYEVCSA 616

Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +       +N   + ++ N+      R+ +  A A+++ +   I+G+++  +M
Sbjct: 617 FTEFYDSCYCIEKNKDGKIIKINHS-----RILICEATAALLRTCFKILGLKTVAKM 668


>gi|73973436|ref|XP_867850.1| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 2 [Canis
           familiaris]
          Length = 421

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 180/414 (43%), Gaps = 62/414 (14%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMI----LSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           K +  + I R  + A   LS ++ +      SRP   D    A  +  ++K D  V  + 
Sbjct: 26  KSISAVPISRKEEVADFQLSVDSLLENNNDHSRP---DTQVQARKLAEKLKCDSVVSEI- 81

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMH 137
             G+G +N  ++   L K +L  ++  G +YG ++ +  G    K+ +EF S N     H
Sbjct: 82  STGQGTVNFKINRELLTKTVLQQVIKDGSKYGLKSELFSGLPQKKIVVEFSSPNIAKKFH 141

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196
           VGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L      + Y++ L ++    
Sbjct: 142 VGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSS---- 197

Query: 197 PEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKII 245
           P  +   VY++ V KE AD     K + E    L   + + L +    +D S++  +++ 
Sbjct: 198 PLQHLFEVYVQ-VNKEAADDKNVAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRV- 255

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               K L +  D + S + F+R     +  ++D+   +G + + I      K T   D+ 
Sbjct: 256 ---YKRLGVHFDEY-SGESFYREKSQEVLKLLDS---KGLLQKTI------KGTAIVDLS 302

Query: 306 RKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
                      GD      L++SDG+  Y   DLA    + ++  FD MIYV       +
Sbjct: 303 GN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKH 353

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            +++  +   +    A+     C+ V     G+   M  R GD   L  V++E+
Sbjct: 354 FQQVFQMLQIMGYDWAE----RCQHVPF---GVVQGMKTRKGDVTFLEDVLNEI 400


>gi|325118008|emb|CBZ53559.1| putative arginyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 944

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 24/151 (15%)

Query: 61  PLTIAELIVARIK-----IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEY 112
           P  IAE ++  ++     ++P V+   ++G+GFIN  LS  YL   L ++ +S   G   
Sbjct: 97  PEAIAEGLLNNLQSERRLLEPVVELTGVSGRGFINFRLSAGYLAARLVNMFLSPKEGTRL 156

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG- 171
           G   +    +V +++ S N    +HVGH R AVVGD LA+L+ F+G+ V R+ ++ D G 
Sbjct: 157 GFPKVLTPERVVVDYASPNICKDLHVGHLRSAVVGDALANLLEFAGHRVVRQNHLGDFGC 216

Query: 172 ---------------AQINTLALSVFWRYQQ 187
                          A+ +  ALS   R QQ
Sbjct: 217 PAALVLGALEDAELRARPDVQALSAALREQQ 247



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHL 502
           K N   Y+ Y+  R + I R+A      +  +L   N +  +  +    +  + QL V L
Sbjct: 809 KGNTAPYILYSLVRVKGILRRA-GWTAGVPTELHGHNNLQSDIVYHLHQNGLDRQLAVRL 867

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +   +++A     P KL  YLY L   F+  +       +    +A +  L + RL L
Sbjct: 868 LGFAMAVQDAIETLMPSKLTAYLYSLCLAFNAFYE------KCEVTKAVDEGLRLTRLLL 921

Query: 563 VHAVASIINSGLNIIGVES 581
           VH V  I+ + L+++G+++
Sbjct: 922 VHGVRQILETSLDLLGIQA 940


>gi|224534693|ref|ZP_03675265.1| arginine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513941|gb|EEF84263.1| arginine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 586

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 125/596 (20%), Positives = 240/596 (40%), Gaps = 96/596 (16%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I I++P     G +S      +S+ L L   TI+E I+  +K   ++     A   ++N+
Sbjct: 33  INIQKPPKNDLGDISI-LIFEISKTLKLPIATISEEIIKNLKAKYEIK----AMGPYLNI 87

Query: 92  YL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +    Y++  +  I      YG +      K+ +EF S N   P+HVGH R   +G++L
Sbjct: 88  KIPRKEYIKNTIQMINTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDAIGESL 147

Query: 151 ASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYYPGVY 205
           + ++   G ++T+   IND G  I  + LA   F      ++A    D  + + Y     
Sbjct: 148 SRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHFIGDFYVQYNK 207

Query: 206 LKHVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-I 258
                +   ++    LL + +      E W  + K ++++     I++  K  N   D I
Sbjct: 208 YAQENENAEEEIQDLLLKWEQKDASTIELWEKLNK-WAIEG----IKETYKITNTSFDKI 262

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRST 314
           ++  + F  G     ++++     +G+ Y+     I       + +K D   KQ      
Sbjct: 263 YLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPLDSDEKVDTKVKQ------ 311

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
                  + L++S+G+  Y   DL     +  E  F+ MIYV+G++   + K L  V+  
Sbjct: 312 -------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGNEQIQHFKSLFFVSEK 364

Query: 374 VS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLW 428
           +   K  ++  L   +V L  DG   KM  R G+ I     +  +++ + S  +   +  
Sbjct: 365 LGISKNKKLFHLSHGMVNLI-DG---KMKSREGNVIDGDNLISDLMESIMSPEITQKIEN 420

Query: 429 RKNSE-------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQ 467
           ++N++       L    +  +K    ++ +F              Y+QY  AR  SI  +
Sbjct: 421 KENAKKNALNIALGAIHYYLLKSAVHKDIIFNKKESLSFTGNSGPYIQYVGARINSILEK 480

Query: 468 ----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               +  I   +DF+L               E +++  ++E    I  A     P  L  
Sbjct: 481 YNALSIPIMEKIDFELLKHE----------KEWEIVKIISELEENIIKAAKDLNPSILTS 530

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           Y Y LA  F  ++        +R +   N  LT  R++ + A+   I + + ++ +
Sbjct: 531 YSYSLAKHFSAYYQ------EVRVIDTFNIDLTTARIEFLKAILQTIKNCMYLLNI 580


>gi|260833402|ref|XP_002611646.1| hypothetical protein BRAFLDRAFT_117121 [Branchiostoma floridae]
 gi|229297017|gb|EEN67656.1| hypothetical protein BRAFLDRAFT_117121 [Branchiostoma floridae]
          Length = 485

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 7/124 (5%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N+AM + + L        P  IA+ IV+ +     V+ V IAG GFIN+++  S+
Sbjct: 112 GDYQCNSAMSIGQLLKAQGKKAVPREIAQAIVSNLPESGIVEKVEIAGPGFINIHVRKSF 171

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +  ILS+ +  G++     + +  +V I++ S N    MHVGH R  ++GD+ A LM F 
Sbjct: 172 VSSILSTALREGVKPPP--VDRKLRVVIDYSSPNIAKEMHVGHLRSTIIGDSFARLMKFV 229

Query: 158 GYEV 161
           G++V
Sbjct: 230 GHDV 233


>gi|42781301|ref|NP_978548.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42737223|gb|AAS41156.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 433

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 55/289 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS-------------GY--VKRL 367
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S             GY  V  +
Sbjct: 171 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKLGYTWVDGM 228

Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           E V           +S +K +I +LL E++    D     + ++  +      V  +VG 
Sbjct: 229 EHVPFGFILKDGKKMSTRKGRI-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 287

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F    
Sbjct: 288 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 343

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F L            D     ++  L ++P++IE A    EP  ++ Y+ D+A  F+ ++
Sbjct: 344 FALK-----------DDYSWSVVKFLNKFPQIIEAAFNKNEPSIISKYILDVAQSFNKYY 392

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 393 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 433


>gi|47224362|emb|CAG09208.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 600

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 131/577 (22%), Positives = 232/577 (40%), Gaps = 97/577 (16%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIE-YGRNL-----I 117
            E + +++K D  V+ V  AG G IN  +    L +K+L        E +G N      +
Sbjct: 65  TEHLASQLKPDRVVEDV-SAGSGVINFKVHRKLLVQKMLEPFGKGQDEMFGLNSDLFSSL 123

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +GT + +E+ S N     H GH R  V+G+ +A+L    G +V R  Y+ D G Q   L
Sbjct: 124 NRGTTL-VEYSSPNIAKKFHAGHLRSTVIGNFIANLKQSLGNKVIRMNYLGDWGMQFGLL 182

Query: 178 ALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-------HVGKELADKYSSELLNFPEEK 228
             + F ++  Q+ L  N    P  +   VY+K         G   A +     L   E++
Sbjct: 183 G-AGFGQFGCQEELKQN----PLQHLFEVYVKANQEAESSGGLAQAAREFFRRLEQREQE 237

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L + + +    + +  R   + L +  D++  E     G    +++++  L  +G +  
Sbjct: 238 ALALWQQFREITVTEYQR-VYERLGVHFDVYSGESSHQDG----VQEVLQQLEGRGLLKT 292

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSY------TYFAADLAYF 341
                     +   DM     + RS      + R +L ++  S+      +  + DLA  
Sbjct: 293 SERGTGVVDLSPDGDMSSVCTVLRSDGTSLYITRSVLPEAQPSHPPEELTSPRSRDLAAA 352

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             + ER  FD MIYV     S + ++L  +   +    A      C  V     G+   M
Sbjct: 353 IDRMERYSFDEMIYVTDKSQSNHFRQLFQLLPTLGHSWAD----RCRHVPF---GLVRGM 405

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------------------------ 436
             R+GD + L  V+DE  +  +R M   +   ++ +                        
Sbjct: 406 KTRSGDVVFLEDVLDEARARMLRNMEQSKTTKQMENPEETAEKVGIAALIIQDFKGPLLS 465

Query: 437 ---FDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQE 488
              FD+ +V +   +  VF +QY +AR  S+ R++     +D  P L  D  P  V    
Sbjct: 466 DYTFDWDRVLQAQGDTGVF-LQYTHARLCSLVRRSGAAEVRDFEPSLLLD--PTGVA--- 519

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                    ++ HL  Y  ++  +    +P  L  +L  L+   H   S  RE P    V
Sbjct: 520 ---------VLQHLLRYDELLYQSAQDLQPKHLVGFLLKLS---HLIASAHRELP----V 563

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +++++   RL+L  A  S++ SG++I+G+     M
Sbjct: 564 KGSSQEVAQARLRLFGAARSVLASGMSILGIAPVERM 600


>gi|150015905|ref|YP_001308159.1| arginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189083528|sp|A6LS73|SYR_CLOB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149902370|gb|ABR33203.1| arginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 563

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 119/536 (22%), Positives = 209/536 (38%), Gaps = 87/536 (16%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N ++    +    +   +  G  YG + IG+G  V +E+ S N   P HVGH     +
Sbjct: 77  YVNFFVDKGVFAENTIKKALEDGENYGASNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204
           G++L  +    GY      ++ D G Q   L +S +  W  ++AL       P      +
Sbjct: 137 GNSLYKMFKKEGYNTVGLNHLGDWGTQFGKL-ISAYDRWVDEEAL----EKAPIDELLRI 191

Query: 205 YLK-HVGKELADKYSSEL-LNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFIS 261
           Y+K H   E       E   NF   K L    D    A+    RD  LK     ++I   
Sbjct: 192 YVKFHEEAEKDPSLEDEARANF---KALE-TGDEKATALWTRFRDLSLKEFERVYNILGV 247

Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           + D   G+      +  +++ L  +G + E       S   Q   ++   +     + GD
Sbjct: 248 KFDSLAGEAFYNDKMDVVVNELKEKGLLVE-------SNGAQVVMLEEYNMPPCIVLKGD 300

Query: 319 DVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                     G+  Y   DLA   Y K  Y+  F   +YV+G+  + + K++  V     
Sbjct: 301 ----------GASIYATRDLAAAMYRKKTYD--FHKCVYVVGTPQALHFKQVFKVLELAG 348

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            + A+  V +   +  + D    K+S R G  + L  ++ E    ++   ++  KN EL 
Sbjct: 349 HEWAKDCVHVGFGLVKFADR---KLSTRNGSIVLLDDLLREAVEKTME--VINEKNPELE 403

Query: 436 DFD------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAK 469
           + +            F  +K   +++ VF              YVQY+YAR  SI  + K
Sbjct: 404 NKEEVAKKIGVGAVIFTYLKNSREKDIVFDWKEILSFDGETGPYVQYSYARGNSILNRGK 463

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +    +D+                 E +L+  +A +  VI  A    EP  L  Y+ ++A
Sbjct: 464 ECTGTVDYSKLS----------SKEEFELVKSIANFNSVITLALDKLEPSILTRYVIEVA 513

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F+  ++          +   +  L   RL LV A   +I +GL ++G++   +M
Sbjct: 514 KGFNKFYNAH------SVLNLEDEDLKATRLNLVKASLQVIKNGLELLGIDVVEKM 563


>gi|229043945|ref|ZP_04191639.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228725385|gb|EEL76648.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 562

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GV +P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVGAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229017498|ref|ZP_04174399.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229023712|ref|ZP_04180204.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228737637|gb|EEL88141.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228743822|gb|EEL93923.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 562

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYNWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL+++GVE+P 
Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLHLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAKSLSNIFTNELTKNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLN-DPFFTKVEAVGP-YVNIFFNRETVSDEVLKTILAKKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|70607149|ref|YP_256019.1| arginyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363443|sp|Q4J904|SYR_SULAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68567797|gb|AAY80726.1| arginyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 618

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++N ++    L K+L + +    +YG        ++ +E  SANP  P+H+GH R +++G
Sbjct: 73  YVNAFVDEKELFKLLFTEMQD--DYGVEKTENPKRIVVEHTSANPIHPLHIGHLRNSILG 130

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           DT++ ++   G++V R +Y+NDAG Q+  L L
Sbjct: 131 DTISRMLKIRGHDVNRRFYVNDAGRQVAILTL 162



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 125/284 (44%), Gaps = 40/284 (14%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L +SDG+  Y   D+AY   K+ +   D +I V+    S    +L A    +  ++   N
Sbjct: 353 LTRSDGTSLYTTRDIAYTVKKFSDFKADTVINVIAEQQSIPQMQLRASLYLLGYERLAQN 412

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---------------------SDS 421
           ++      +   GM  +MS R G FI+L  V+++V                      + +
Sbjct: 413 LVHYSYGMVNLQGM--RMSGRLGRFISLDDVIEKVSEVAKKKIEEKSGDITNLRDIVNSA 470

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +R+ +L   +++ + F+   + +  ++N   Y+QY YAR  +I  + +D     D DL  
Sbjct: 471 IRYAILSVASNKPVTFNINNIVD-FEQNSGPYLQYTYARAYNILAKNQDEIKLTDADL-- 527

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  S+    + +L++ +A +P     A     P  L  +L   A VF+  W +   
Sbjct: 528 -------SDLIGDKRRLLLLIARFPETFNKAIDELRPEDLIDFLRRTADVFN-RWYNFE- 578

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R +Q  + +  + RL +V  +  ++ +GLN +G++  ++M
Sbjct: 579 ----RVLQEPDYRKRITRLFIVKGIERVLYNGLNALGIKPLSKM 618


>gi|218234429|ref|YP_002366898.1| arginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218162386|gb|ACK62378.1| arginine--tRNA ligase [Bacillus cereus B4264]
          Length = 562

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GV +P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVGAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229059878|ref|ZP_04197253.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719423|gb|EEL71026.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 314

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  YE  FD  +YV+G + S +                Q  
Sbjct: 52  KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 95

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 96  TVLKKLGYDWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 155

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 156 LKQKEEVAKQVGIGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 211

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 212 ILRKDSVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSTISK 260

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ N  K +  RL L +AV  ++  GL ++GV +P 
Sbjct: 261 YVLDVAQAFNKYYGN------VRILEENEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 312

Query: 584 EM 585
           EM
Sbjct: 313 EM 314


>gi|302543493|ref|ZP_07295835.1| arginine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461111|gb|EFL24204.1| arginine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 601

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 14/141 (9%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDP---DVDSVF----IAGKGFINLYLSPSYLR 99
            N  + L++ L  +P  +A  +V R+ + P   D DSV     ++G GF+N+ ++ S + 
Sbjct: 43  ANGMLALAKQLKGNPRELAGKVVERLPVAPSSADPDSVIADIEVSGPGFLNITVADSAIT 102

Query: 100 KILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
             L++       G+ +  +    GT V I++   N    MHVGH R AV+GD +  ++ F
Sbjct: 103 ATLAARAADDRLGVPFAAD---AGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVKILEF 158

Query: 157 SGYEVTREYYINDAGAQINTL 177
           +G +V R ++I D G Q   L
Sbjct: 159 TGEKVIRRHHIGDWGTQFGML 179



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 36/181 (19%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSDG + Y A DL+  + + +    D ++YV+ +  S + K +   A  +     
Sbjct: 317 PLIVQKSDGGFGYAATDLSAIRDRVQNLQADTLLYVVDARQSLHFKMVFETARRIGWLNE 376

Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           +++ V L     L +DG P K   R G+ + L  ++DE                      
Sbjct: 377 KVHAVQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEASERAAAVVREKSEKLGLTEAE 434

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A 
Sbjct: 435 ILERGGQVGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRRAD 493

Query: 470 D 470
           +
Sbjct: 494 E 494


>gi|229029913|ref|ZP_04185982.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228731421|gb|EEL82334.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 562

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 55/289 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S                +V  +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKIGYNWVDGM 357

Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           E V           +S +K ++ +LL E++    D     + ++  +      V  +VG+
Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKRNIEEKNPNLKQKEEVAKQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F    
Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F L            D     ++  L ++P+VIE A    EP  ++ Y+ D+A  F+ ++
Sbjct: 473 FALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      +R ++ +  K +  RL LV+AV  ++  GL ++GV++P EM
Sbjct: 522 GN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVDAPEEM 562



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G ++      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDDFGDVAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    EYG+N  G    V 
Sbjct: 59  KEVAKKLS-NPFFTKVEAVGP-YVNVFFNREIVSDAVLKTVLAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229172904|ref|ZP_04300458.1| Arginyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228610649|gb|EEK67917.1| Arginyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 595

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S +                Q  
Sbjct: 333 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFN--------------QFF 376

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 377 TVLKKLGFTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIDLAKQNIEEKNPN 436

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 437 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 492

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P+VIE A    EP  ++ 
Sbjct: 493 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 541

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 542 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 593

Query: 584 EM 585
           EM
Sbjct: 594 EM 595



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 35  DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +   +++G E YG+N  G    V 
Sbjct: 92  KEVEEKLN-DPFFAKVEAVGP-YVNVFFNRETVSDAVLKTILAGKEKYGQNHFGCEKTVV 149

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 202


>gi|67970581|dbj|BAE01633.1| unnamed protein product [Macaca fascicularis]
          Length = 454

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 107/507 (21%), Positives = 198/507 (39%), Gaps = 110/507 (21%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA----------------- 178
           MHVGH R  ++G++++ L  F+GY+V R   + D G Q   L                  
Sbjct: 1   MHVGHLRSTIIGESVSRLFEFAGYDVLRLNRVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 179 --LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             L  F++  +  ++ + +  +  Y  V L   GK           N    K   ++ D 
Sbjct: 61  GDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQ-GK-----------NPDITKAWKLICDV 108

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           S Q   KI      AL++   +    + F++     + DI+     +G+V          
Sbjct: 109 SRQEFNKI----YDALDVS--LIERGESFYQ---DRMNDIVQEFEDRGFV---------- 149

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
               + D D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 150 ----QVD-DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 201

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFI 408
           + S  S + + + A A  +     ++        R++  G  +       K   RAG+ +
Sbjct: 202 VDSGQSVHFQTIFAAAQMIGWYDPKVT-------RVFHAGFGVVLGEDKKKFKTRAGETV 254

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L  ++ E                             +    +++  L         F F
Sbjct: 255 RLMDLMGEGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSF 314

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQL 498
            K+ +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L
Sbjct: 315 DKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKL 368

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M 
Sbjct: 369 GRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDR-QTGKILKVNMW 427

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R+ L  AVA+++  G +I+G++    M
Sbjct: 428 RMLLCEAVAAVMAKGFDILGIKPVQRM 454


>gi|296393184|ref|YP_003658068.1| arginyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180331|gb|ADG97237.1| arginyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 590

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     N  + L+R L  +P  +A  + AR++       V  +G GF+NL  + S 
Sbjct: 40  RPSEHADYQANGVLALARQLKANPRELAGKVAARLESSELFAQVEASGPGFLNLVFADSA 99

Query: 98  LRKILSSIVVSGIEYGRNLIG-----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   L+        +G   +G     +G    I++ + N    MHVGH R  ++GD L  
Sbjct: 100 LTGQLAE------RHGDPRLGLGAPKQGRTTVIDYSAPNIAKEMHVGHLRSTIIGDALVR 153

Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177
           L+ F+G +V R+ ++ D G Q   L
Sbjct: 154 LLTFTGSQVIRQNHVGDWGTQFGML 178



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)

Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG + Y A DLA  + +  +     ++YV+GS  + + K +   A         + V 
Sbjct: 320 KSDGGFGYAATDLATLRHRVRDLKATRLLYVVGSPQALHFKMVFETARRAGYLPDGVEVA 379

Query: 385 LCELVR-LYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
             +    L  DG P K   R G+ I L  ++DE                           
Sbjct: 380 HVQFGSVLGADGKPFK--SREGETIRLIALLDEAVARAKATIAERSPELEPNAQELRAHE 437

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  + ++  L    +    FD  ++    + N   Y+QYA+AR RS+  +A +  P   
Sbjct: 438 VGIGAAKYADLSTSRTRDYVFDLDRMLSL-QGNTGVYLQYAHARIRSLLARAGEAGP--- 493

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P  V    +  + +E  L++ L E+  V+++   + EP++L  YLY LA  F   +
Sbjct: 494 ---APEGV---PAPLEPAERALLLALDEFGDVLKSVDESLEPHRLCAYLYTLAQAFSDFY 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 P  +   A  R+L   R  +       +  GL+++G+ +P  +
Sbjct: 548 E---ACPVAKAPTAGQRRL---RTAICELTGDTLALGLSLLGIAAPERL 590


>gi|320100813|ref|YP_004176405.1| arginine--tRNA ligase [Desulfurococcus mucosus DSM 2162]
 gi|319753165|gb|ADV64923.1| Arginine--tRNA ligase [Desulfurococcus mucosus DSM 2162]
          Length = 754

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)

Query: 88  FINLYLS-----PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           FIN Y++      S  +  + S++   +      IG G  V +E  SANP  P+H+G  R
Sbjct: 91  FINGYVNVEVDYSSIFKSFMESLLTGKLLEDLRSIGTGRSVVVEHTSANPVHPLHIGSGR 150

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +V+GDT + L+ + G+ V+R +Y+ND G Q+  LA  V
Sbjct: 151 NSVIGDTYSRLLKYLGFNVSRLFYVNDLGRQVAVLAYGV 189



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 154/394 (39%), Gaps = 73/394 (18%)

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGY--VYEGILPPPKS 296
           ++K   + L  +N+  D F    D+   D      R ++D +   GY  V +G +    +
Sbjct: 385 VLKGFLETLSKINVSFDGF----DYESSDEVLELSRKVVDRVIESGYARVVDGAVEVDLN 440

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-V 355
           K  +  D +  + LF     G  + R   +SDG+  Y   D+AY   K+ R     +Y V
Sbjct: 441 KAGE--DHEYVKNLFHPDQPGRFIIR---RSDGTTLYVTRDIAYTLMKFTRHRAEKVYNV 495

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR------------ 403
           +  + S   K+L+AV   +  ++   N++      ++  GM  +MS R            
Sbjct: 496 IAVEQSRAQKQLKAVLYLLGYRREADNLVHFSYEMVHLKGM--RMSGRRGIYYTVDELLM 553

Query: 404 ---------------------AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
                                 GD++ LR V   +  ++ R ++L  +  ++L FD  ++
Sbjct: 554 DMENSIIGKHLEETGGFKREATGDYMELRSVAGILAVNNTRALLLSVEPGKVLSFDPGRI 613

Query: 443 KEQSKENPVF----YVQYAYARCRSIFRQAKDIFPDLDFDLFP-------RNVIPQESEF 491
                   VF     V Y   R +SI R+   + P  D  +          ++  +E  F
Sbjct: 614 -------GVFEHGITVTYGLVRAQSILRRLWGVEPLDDASIVKTRGLDTLSSLKQEELGF 666

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E QL+  L  YP V+  A     P +L  Y   L+  F+      R   + R +   
Sbjct: 667 NVEEKQLLEALVGYPMVLREAYEYMRPDRLLEYASGLSLAFN------RMYEKHRVINEP 720

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     +R+ L  AV  +++   +I+G   P  +
Sbjct: 721 DPVRKNIRVLLTIAVLLVLSDLADIMGFHKPRRL 754


>gi|320106629|ref|YP_004182219.1| arginine--tRNA ligase [Terriglobus saanensis SP1PR4]
 gi|319925150|gb|ADV82225.1| Arginine--tRNA ligase [Terriglobus saanensis SP1PR4]
          Length = 661

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 44/343 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L +I  E+P     G ++   A  L++ L   P  IA+ +   ++    + SV IAG G+
Sbjct: 25  LAQIAAEQPPKTELGEVALPVAFELAKRLKKAPRVIAQELADEMRGVEGIASVDIAGAGY 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL    + L + ++      +    ++ G G ++ +E  S NP    HVGH R A++GD
Sbjct: 85  LNLKFDRASLVRAMA------VGQHADVGGLGFRL-VEHTSINPNKAAHVGHLRNAILGD 137

Query: 149 TLASLMA----FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL----PEGY 200
           T   L+      +GY V  + YI++ G Q+  + + +     ++L +  S L     +G 
Sbjct: 138 TFQRLLRKDDFKNGYGVGVQNYIDNTGVQVADVVVGLTHLEGKSLADVRSLLIDLKAKGQ 197

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWL---------------PIVKDYSVQAMMKII 245
               YL  +   ++  Y+ +  +    K L                I+ D    A+++  
Sbjct: 198 RIDYYLWDLYARVSRWYTEDPADIGARKELRLATLHLIEEGGNDTAIIADIVATAVIERH 257

Query: 246 RDDLKALNIQHDIFISEDD---FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + ++ L+I++D    E +    H  D           AR   + +G+L        + C
Sbjct: 258 LETMQRLDIEYDFLPRESEILHLHFWDA----------ARALMIEKGVLYEETEGKNKGC 307

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
            + R+    ++    DD  + +++S+G+ TY   D+AY   K+
Sbjct: 308 WVMRRPGTEQTEGTDDDA-KVIVRSNGTVTYVGKDIAYHLWKF 349



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFC-KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ++   ++R+ ML    + ++ FD    +  + +  P  YVQYA  R  +I R+A  +  D
Sbjct: 498 QIAVGALRYFMLKFTRNTVIAFDLRDALSFEGETGP--YVQYAIVRAGNILRKAG-VEQD 554

Query: 475 LDFDLFPR-NVIPQ-ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D+    +V  Q + + + S  ++ +  +    VIE A +A EP  LA Y + LA  F
Sbjct: 555 ASLDVLADVDVAAQIDGDENNSVWEIWLMASRLTTVIEAAIVAAEPALLARYAFQLAQAF 614

Query: 533 H 533
           +
Sbjct: 615 N 615


>gi|229102811|ref|ZP_04233507.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228680596|gb|EEL34777.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 562

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 55/289 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S                +V  +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKLGYNWVDGM 357

Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           E V           +S +K ++ +LL E++    D     + ++  +      V  +VG 
Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F    
Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F L            D     ++  L ++P+VIE A    EP  ++ Y+ D+A  F+ ++
Sbjct: 473 FALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 522 GN------VRILEESKEKDS--RLVLVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229074894|ref|ZP_04207903.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228708231|gb|EEL60395.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 562

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 55/289 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S                +V  +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGLEQSLHFNQFFTVLKKLGYNWVDGM 357

Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           E V           +S +K ++ +LL E++    D     + ++  +      V  +VG 
Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F    
Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F L            D     ++  L ++P+VIE A    EP  ++ Y+ D+A  F+ ++
Sbjct: 473 FALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 522 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + ++LD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQMLD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|145349392|ref|XP_001419119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579350|gb|ABO97412.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 652

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 88  FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++NL ++ P      + ++   G ++G     KG +V IE  S+NP  P+H+G+ R  ++
Sbjct: 36  YVNLKMNRPMVFEATMKAVARRGGKFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMI 95

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           G  L+ +M   G++V   +Y+ND GAQI   AL+
Sbjct: 96  GAHLSRMMKACGHDVKEAFYVNDLGAQIGLTALA 129


>gi|255079666|ref|XP_002503413.1| predicted protein [Micromonas sp. RCC299]
 gi|226518679|gb|ACO64671.1| predicted protein [Micromonas sp. RCC299]
          Length = 481

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 88  FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++NL++  +   R ++ ++   G ++G      G +V IE  S+NP  P+H+G+ R  ++
Sbjct: 11  YLNLFVDRARVFRLVIRAVSAQGDKFGHTKAAGGKRVIIEHTSSNPNAPLHIGNLRNVMI 70

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           G  LA + A  G+ V + +Y+ND GAQI   AL+
Sbjct: 71  GAHLAKMQAACGFAVKQAFYVNDLGAQIGLTALA 104


>gi|163939982|ref|YP_001644866.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862179|gb|ABY43238.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 562

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  YE  FD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEDVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSTISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL L +AV  ++  GL ++GV +P 
Sbjct: 509 YVLDVAQAFNKYYGN------VRILEESEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTKNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  K+L +I+    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDKVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|228958480|ref|ZP_04120200.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801107|gb|EEM48004.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 562

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y  GFD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P++I  A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIGAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P 
Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +I+    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|66806687|ref|XP_637066.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60465463|gb|EAL63548.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 738

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 126/605 (20%), Positives = 247/605 (40%), Gaps = 124/605 (20%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKIL----------SSIVVSGIEY------------GRN 115
           ++ + ++ KG +NL +S  YL  IL          S  ++  +++             + 
Sbjct: 153 IEKLELSNKGHLNLRVSDEYLTTILKLWINPNEDKSKFLIDNLKFQDDVNLNEMEKENKL 212

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           L  +  KV ++F S N +  +HVGH R   +G+++  ++ + G++V R  +  D G  + 
Sbjct: 213 LPIRSKKVLVDFASPNMSKELHVGHLRSIALGESICRILEYMGHDVERISHAGDFGTPLG 272

Query: 176 TL---ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
            +   +L     Y + + +      E   P        KEL++ Y++       ++    
Sbjct: 273 IVLAHSLETNADYLKHIQDPTCKDNEPIIP------TPKELSELYTTSKKRTKSDEQFSK 326

Query: 233 VKDYSVQAMMK--IIRDDLKALNIQ------HDIFISEDDFHRGDPSPIRDIID-NLARQ 283
              ++     K   I D +    I       +D ++S  +  R   + +  ++D N+  +
Sbjct: 327 RTLWTAAEFQKGPPIYDKVSGEQIGGSDPIVYDAWLSLCEASRIGFNKVFQMLDINVNER 386

Query: 284 G-YVYEGILPPPKSKTTQK-----CDMDRKQLLFRSTMVGD-DVDRPLLKSDGSYTYFAA 336
           G   Y  +LP      T+       D  RK +    T   D  V   + KSDG+Y Y   
Sbjct: 387 GESFYRDMLPGVIEDLTKMGFVDISDDGRKCIFLDKTKCKDSQVPVVVQKSDGAYLYATT 446

Query: 337 DLAYFKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR--- 390
           D+A  K + E G + +I +     SDH   V ++   A  ++ K+ +++ L   +VR   
Sbjct: 447 DIAAIKHRVENGKEWVIVITDDSQSDHFQQVFKIAEDANWLNRKQTRVDHLSFGVVRGPN 506

Query: 391 ----LYRDGMP----------IKMSKRA------------------GDFITLRHVVD--- 415
                 RDG P          I+ SK+A                   + + +  ++D   
Sbjct: 507 GQKLSSRDGNPIALIDLLQESIERSKQATSLSKSFTRSEKLDITQNANNVEINRMLDTFE 566

Query: 416 -------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                              ++G  ++++  L  +N+  + F +  +    K N   Y+ Y
Sbjct: 567 NNNNDDNNNETTIDEKHFLKIGMGALKYYDLAHRNNPYV-FSYDSIL-SFKGNTSIYILY 624

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            Y R  ++ R+A   F  L+ +    N+I +  EF   E  L+  ++ +  V++    + 
Sbjct: 625 CYTRISTLLRRAN--FDGLNLN---PNLI-EFKEFTEKERNLVFIMSRFSDVMKGTEQSL 678

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +  YL+DLA+ FH  +   +       +  N R+    RL +  AV  I+++GL++
Sbjct: 679 KPGFICDYLWDLANSFHQFYETEK-------IIGNERQ--DQRLFICLAVQRILSTGLHL 729

Query: 577 IGVES 581
           +GVE+
Sbjct: 730 LGVET 734


>gi|324326226|gb|ADY21486.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 562

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 125/302 (41%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIDLAKQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L            D     ++  L ++P VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWNIVKLLNKFPEVIEAACNKNEPSVISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GV++P 
Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVDAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYEKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|227501367|ref|ZP_03931416.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216466|gb|EEI81876.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 565

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSG 109
           L+R +  +P  IAE + + + +     ++++      ++N Y+    +  + L+ I+   
Sbjct: 46  LARTMRKNPAIIAEELASSLDLKAFEKIENL----NAYVNFYVDRKMFEEETLNEIIEKK 101

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +Y  + IGKG  + +EF S N   P H+GH R  V+GD L ++  F GY      YI D
Sbjct: 102 EKYASSDIGKGKNIVVEFSSVNIAKPFHIGHIRSTVIGDALRNIHKFLGYNTIASNYIGD 161

Query: 170 AGAQINTL 177
            G Q  T+
Sbjct: 162 YGTQFGTM 169



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 42/286 (14%)

Query: 324 LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---------- 372
           ++KS+GS  Y   D+A     K    FD  +YV+ +  + +  +L A+            
Sbjct: 298 VIKSNGSSAYITRDIATAINRKKVYDFDKNLYVVATQQNLHFDQLFAILKLMGYDFYKDC 357

Query: 373 -------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K Q+ V L +++    +     M  R  +   +      VG 
Sbjct: 358 KHVSFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIEKTKEVMESRHTEIEDIEETAKIVGI 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V+F  L+    +   FD+ +V     E    Y+QY YAR +S+ R+A   F   +   
Sbjct: 417 GAVKFQELYNNRIKDYVFDWDEVLNFDGETGP-YIQYTYARAKSVLRKAG--FEKAEKMN 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           F +  I  + EF      L+  LA +  ++  A    EP  +  +L ++A  F+  ++  
Sbjct: 474 FTK--ITSDEEF-----ALVKSLANFKDIVIKACEKYEPSLITRHLTEIAKNFNKFYNTC 526

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   ++++   RL L +A + +I  GL ++G+++  +M
Sbjct: 527 Q-------VNVEDKEVKEERLALTYASSLVIKIGLGLLGIKTVEKM 565


>gi|218883811|ref|YP_002428193.1| Arginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765427|gb|ACL10826.1| Arginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 758

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 9/100 (9%)

Query: 87  GFINLYLS-----PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           G+IN+ +       S++  +LS  ++S +      IG G  + +E  SANP  P+H+G  
Sbjct: 98  GYINVEVDYSTIFKSFMESLLSGRLLSELRS----IGFGKNIVVEHTSANPVHPLHIGSG 153

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           R +V+GDT A L+ + G+ V R +Y+ND G Q+  LA  V
Sbjct: 154 RNSVIGDTYARLLKYLGFNVVRLFYVNDLGRQVAVLAYGV 193



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 156/379 (41%), Gaps = 63/379 (16%)

Query: 210 GKELADKYSSELLNF-----PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           G E A++  SE++       PE + L  ++D S   +   I + L+ +NI  D F    D
Sbjct: 356 GYEDAEREISEIMKRAEGGDPEVRRL--LRDISGNVLRGFI-ETLEKINIGFDGF----D 408

Query: 265 FHRGDP--SPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           +   D      + I+D + +  Y  + +G +    +K  ++    R   LF     G  +
Sbjct: 409 YESSDEVLELSKGIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRS--LFHPDQPGRFI 466

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-VMGSDHSGYVKRLEAVAAAVSEKKA 379
            R   + DG+  Y   D+AY   K++R     +Y V+  + +   K+L+A+   +  K+ 
Sbjct: 467 IR---RRDGTTLYVTRDIAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKRE 523

Query: 380 QINVL--LCELVRLY------RDGMPIKM-----------------------SKRAGDFI 408
             N++    E+V L       R G+   M                        +  G +I
Sbjct: 524 ADNLVHFSYEMVHLKNMRMSGRRGIYYTMDELLMDMEDSIVARGIEGSSSFKQEAEGKYI 583

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L      +  ++VR ++L  +  ++L FD  K+   S E+ +  V Y   R +SI R+ 
Sbjct: 584 DLMETARMLAVNNVRALLLSVEPGKVLSFDPSKIG--SFEHGIT-VTYGLVRAQSILRKL 640

Query: 469 KDIFPDLDFDLFPRNVI-------PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             + P ++ +      I        +  EF+T E Q++  L  YPRV+  A     P KL
Sbjct: 641 WGLEPLVEINAVRSRSIEIYTSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKL 700

Query: 522 AFYLYDLASVFHGHWSHGR 540
             Y  +L+  F+  +   R
Sbjct: 701 LEYAVELSLFFNRMYEKHR 719


>gi|282865622|ref|ZP_06274673.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282559666|gb|EFB65217.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 606

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 51/296 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  K++G Y Y A DL+  + + +    D ++YV+ +  S + K +   A        
Sbjct: 329 PLIVKKTNGGYGYAATDLSAIRDRVQGLKADTLLYVVDARQSLHFKMVFETARRAGWLNE 388

Query: 380 QINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +    L     L +DG P K   R G  + L  ++DE                      
Sbjct: 389 DVTAHQLAFGTVLGKDGKPFKT--REGTTVRLEDLLDEAVERATAVVREKAEKVGLSEEE 446

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L         FD  ++   + +  V Y+QYAYAR RSI R+A 
Sbjct: 447 IVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKAG 505

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D  P              E E   +E  L +HL ++  V+       EP+KLA YLY LA
Sbjct: 506 DANP----------AAHPELELAPAERALGLHLDQFGAVLSEVAEGYEPHKLAAYLYQLA 555

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S     +   +          N  ++   RL LV   A  ++ G+ ++G+ +P  +
Sbjct: 556 SHLTTFYDQCQ-----VLSDDNPAEVVENRLFLVELTARTLHQGMRLLGIRTPERL 606



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  +   +     +  + ++G GF+N+ L+   + + L++
Sbjct: 58  FQANGILALAKKLKGNPRELAAKVTDTLPSGELIKDIEVSGPGFLNITLTDRAITETLAA 117

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
               G   G  +        I++   N    MHVGH R AV+GD +  ++ F+G  V R 
Sbjct: 118 RAADGDRLGVPVKADAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGETVVRR 177

Query: 165 YYINDAGAQINTLALSVF 182
           ++I D G Q   L   +F
Sbjct: 178 HHIGDWGTQFGMLIQYLF 195


>gi|169835629|ref|ZP_02868817.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 596

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 3/146 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGK-GF 88
           + +  P          + A  LS+ L   P  I E I   +      D D    A + GF
Sbjct: 30  VTVTVPTQLDKADFVCDVAFRLSKILHTAPYVIGESIAKEVNSTQLQDGDYTLEAARPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN++L+   L KIL  I  +   YGRN I  G +  IE  S NP   MH+GH R  ++G 
Sbjct: 90  INVHLTDVSLSKILIHINDTNQNYGRNDILAGQRWVIEHTSPNPNKAMHIGHLRNNLIGM 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174
            +A++ A+ G  V R+   N+ G  I
Sbjct: 150 AVANIAAYCGASVVRDCIDNNRGIAI 175



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 54/290 (18%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
           D  +LKSDG+  Y   D+A  K K  R   D + +V+G + S  +K++ A+   +   K 
Sbjct: 326 DTIVLKSDGTSLYITQDIALTKLKKNRFKADKLFWVIGPEQSLAMKQVFAICEQLGIGKL 385

Query: 379 AQINVLLCELVRLY--RDGMPIKMSKRAGDFITLRHVVDEV------------------- 417
           +    L   L+ +   + G   KMS R G+ + + +++DEV                   
Sbjct: 386 SDFTHLPYGLISIVDKQTGAKKKMSSRDGNTLYIDNLLDEVRDSLLNSGRDYDEKTADLI 445

Query: 418 GSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             D+V+F +L   R +  +LD    +     K +   Y+ Y  +R  S+  +        
Sbjct: 446 AIDAVKFAVLKPSRNSDSVLDI---QESINLKGDSGIYILYTLSRINSLLSKYTG----- 497

Query: 476 DFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             DL     +PQ  E   S  E ++++ +A +P+ I +A  +  P  L  Y+ D+A VF+
Sbjct: 498 --DL----TLPQSEELALSSEERKIVMLMAYFPKRITDALESYAPNILIEYILDIAHVFN 551

Query: 534 GHWSHGRENPRLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
             ++      + +F+    AN RK    +L L  ++A +I + L ++G++
Sbjct: 552 SIYA------KEQFISEDVANTRK----KLYLSKSIAIVITNALKLLGIK 591


>gi|229161178|ref|ZP_04289165.1| Arginyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228622274|gb|EEK79113.1| Arginyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 562

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 59/291 (20%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S +  +   V   +  K     
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKLGYKWVD-G 356

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------V 417
           +       + +DG   KMS R G  I L  V++E                         V
Sbjct: 357 MEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIGLAKQNIEEKNPNLKQKEEVAKQV 414

Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           G  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F  
Sbjct: 415 GVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFET 470

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
             F L            D     ++  L ++P+VIE A    EP  ++ Y+ D+A  F+ 
Sbjct: 471 CTFALK-----------DDHSWSVVKLLNKFPQVIEAAFHKNEPSIISKYVLDVAQSFNK 519

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GV++P EM
Sbjct: 520 YYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVDAPEEM 562



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDDFGD-AAFPCFSLAKQYKKSPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLD-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAEKGEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|198456442|ref|XP_002136329.1| GA24005 [Drosophila pseudoobscura pseudoobscura]
 gi|198142680|gb|EDY71404.1| GA24005 [Drosophila pseudoobscura pseudoobscura]
          Length = 282

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 8/141 (5%)

Query: 42  HGHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           +G    N AM L++ +   G++  P  IA  +     + P ++ + + G GF+N+YLS  
Sbjct: 114 YGDYQCNNAMGLAKKMKEMGVNRTPRDIANELQKCCPLSPIINKLEVGGAGFVNVYLSKD 173

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y  + L +I+  GI+  R L     +V ++F S N    MHVGH R  ++G+++  L+ F
Sbjct: 174 YAAQSLKNILRHGIKPPRVL---KRRVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLLEF 230

Query: 157 SGYEVTREYYINDAGAQINTL 177
             ++V R  ++ D G Q   L
Sbjct: 231 LQHDVIRINHLGDWGTQFGML 251


>gi|239929677|ref|ZP_04686630.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291437997|ref|ZP_06577387.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291340892|gb|EFE67848.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 591

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 55/297 (18%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSDG + Y A DL+  + + +    D ++YV+ +  + + + +   A        
Sbjct: 316 PLIVQKSDGGFGYAATDLSAIRDRVFHLKADTLLYVVDARQALHFRMVFETARRAGWLND 375

Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +  V L     L +DG P K   RAG+ + L  ++DE                      
Sbjct: 376 DVKAVQLAFGTVLGKDGKPFKT--RAGETVRLVDLLDEAIERASAVVREKAQDLSEEEIA 433

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR RSI R+A   
Sbjct: 434 ERGTQVGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKA--- 489

Query: 472 FPDLDFDLFPRNVIPQ---ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                    P  V P    E     +E  L +H+  +   +  A     P+KLA YLY L
Sbjct: 490 ---------PEGVRPAAHPELSLHEAERALGLHVDAFAETVAEAAREYAPHKLAAYLYQL 540

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS++   +       +   ++A + +    RL L    A+ ++ G+ ++G+ +P  +
Sbjct: 541 ASLYTSFYD------KCPVLKAESPEQVANRLFLCDVTAATLHRGMALLGIRTPERL 591



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 15/141 (10%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A  +VA +     +  V ++G GF+N+ ++    R I+ +
Sbjct: 41  FQANGILALAKKAKANPRELAAEVVAHVVTGDVIKDVEVSGPGFLNITITD---RAIIEN 97

Query: 105 IVVS--------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +           G+ +       GT V I++   N    MHVGH R AV+GD++  L+ F
Sbjct: 98  LAARYADDTGRLGVPFAER---PGTTV-IDYAQPNVAKEMHVGHLRSAVIGDSVVQLLEF 153

Query: 157 SGYEVTREYYINDAGAQINTL 177
           +G  V R ++I D G Q   L
Sbjct: 154 TGENVIRRHHIGDWGTQFGML 174


>gi|291459323|ref|ZP_06598713.1| arginine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418577|gb|EFE92296.1| arginine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 634

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 134/620 (21%), Positives = 245/620 (39%), Gaps = 107/620 (17%)

Query: 29  LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-----PDVDSVF 82
           L R+ +  RP  C +    +N AM  ++    +P+ IA+ +  R++       P    V 
Sbjct: 59  LGRVTVSNRPDLCEY---QSNGAMAGAKRYHKNPMEIAKELAERLREQGSTEVPIFRRVE 115

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHV 138
               GF+NL L  ++L   L+ +        +  +G    +G ++ +++  AN   P+HV
Sbjct: 116 AVRPGFLNLDLGEAFLSGYLNEMNA------KEKLGLDPKEGKRIIVDYGGANVAKPLHV 169

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R AV+G+ L  L    G     + ++ D G Q+  +   +  R         S+L E
Sbjct: 170 GHLRSAVIGEALKRLALRMGNHAIGDVHLGDWGLQMGLIIAELSDRGLSCEDLTLSELEE 229

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSV---------QAMMKIIRD 247
             YP    K   K+     + ELLN P+  ++     K+            + +M++ + 
Sbjct: 230 -IYPAASKKAKEKDA----NGELLN-PDFAKRAHEATKELQSGDKACRRIWEKIMELSKA 283

Query: 248 DLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           DLK    AL++  +++  E D    +P  I  +I+ L R+G  YE               
Sbjct: 284 DLKKNYDALDVHFELWKGESD---AEPY-IPGLIEELVRKGLAYE--------------- 324

Query: 304 MDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGS 358
             +  L+      GD  + P   + KSDG+  Y  +DL       E+ F  D  IY+  S
Sbjct: 325 -SQGALVVDIAEPGDKKELPPCMIRKSDGASLYATSDLGTI-LDREKNFHLDRYIYIADS 382

Query: 359 DHSGYVKRLEAVAAAVS-----------------------EKKAQINVLLCE-LVRLYRD 394
             S +  +   VA                            K  +  VL  E L+R  R+
Sbjct: 383 RQSLHYTQFFRVAKKAGFVPPDTELDYIGFGTMNGKDGRPFKTREGGVLRLELLIRDTRE 442

Query: 395 GMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            +  ++    G+ ++ R      D V   ++++  L  + +    FD  K     + N  
Sbjct: 443 SVLARIRASRGEEMSGREAEETADVVALAALKYGDLQNQATRDYVFDLEKFT-AFEGNTG 501

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF------DTSELQLIVHLAEY 505
            Y+ Y   R  SI R+  +    ++F      +    SEF      + S  +L + LA +
Sbjct: 502 PYILYTIVRIASILRKYAEA-KGMEFHGAEDWIREHGSEFEIRIMEEKSGYELQLSLARF 560

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              ++ A     P+K+  Y+Y L++ F+  +        ++ +   + +    RL  +  
Sbjct: 561 QDEMKAAWKELAPHKICSYIYKLSNDFNSFYHE------VKILAEPDEEKKKSRLATLIL 614

Query: 566 VASIINSGLNIIGVESPNEM 585
              I+N  ++ +G  +P  M
Sbjct: 615 SWKILNDCIHTLGFSAPERM 634


>gi|228927257|ref|ZP_04090319.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121744|ref|ZP_04250965.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228661660|gb|EEL17279.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228832404|gb|EEM77979.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 562

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 128/300 (42%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +    FD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFSFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIDLAKQNIEEKNPNLK 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEIAFNKNEPSVISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R +  N  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N+Y +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAQKLS-DPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|258510427|ref|YP_003183861.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477153|gb|ACV57472.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 565

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 128/591 (21%), Positives = 234/591 (39%), Gaps = 89/591 (15%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P + A G L+       +R +  +P+ IAE +  R++    V+S   A KGF+N+ 
Sbjct: 26  MLEYPPNPALGDLAL-PCFPFAREMRKNPVQIAEELAERVRQVDGVESAH-AEKGFLNIR 83

Query: 93  LSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ S +  +++   + S  +      G+G    I++ S N   P  VGH R  ++G  L 
Sbjct: 84  LARSQFAERVVGQAIASVHDLFSEERGRGRTAVIDYSSPNIAKPFGVGHLRSTIIGHALK 143

Query: 152 SLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HV 209
            +M   G+ V    ++ D G Q    +A  + W  +  +  +    P      +Y++ H 
Sbjct: 144 RMMREDGWRVEGVNHLGDWGTQFGKVIAAYLKWGSEDEVRKD----PVKELFRLYVRFHQ 199

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM---MKIIRDDLKALNIQHDIFISEDDFH 266
             E     SS  L      W   +++   +A       I + L+A    +D+   E + +
Sbjct: 200 EAE-----SSPELEDEGRLWFKKLEEGDPEATRLWRWFIDESLRAFKQVYDLLGVEFEHY 254

Query: 267 RGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL----LFRSTMVGDD 319
            G+      +  I+  L  +G + E        +  +  D+    +    + +S      
Sbjct: 255 IGESFYNDKMDAIVQELREKGLLVE-------DQGAEVVDLSAYGMPPCIIVKSDGTSIY 307

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             R L  +D  +  F A             D ++YV+G++   + +++  V   +    A
Sbjct: 308 ATRDLAAADYRHHAFGA-------------DTLLYVVGAEQKLHFEQVFKVLELMGRDYA 354

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE------------ 416
           + N +  +   +  +G   ++S R G  + L           R ++DE            
Sbjct: 355 K-NCVHVQFGLMKFNGQ--RLSTRRGHVVYLEDVLQKAIEETRAIIDEKNPGLENKDAIA 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V F  L       +DF +  V     E    YVQY +AR  S+ R+A+     
Sbjct: 412 RQVGVGAVIFNDLKTYRVHEVDFRYEDVLNFDGETGP-YVQYTHARASSVLRKAEADA-- 468

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                        + E D +E  LI  LA+    +E A    +P  +A Y   +   F+ 
Sbjct: 469 -------AAKWAPDYEPDDAEWALIFLLAQANESLERAVDTYDPSVIARYALQMCHAFNR 521

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +    ++P    +QA+    T  RL L  AV   +   L ++G+E+P EM
Sbjct: 522 FY---HDHP---ILQADEPART-SRLALTRAVREALAKSLYLLGIEAPEEM 565


>gi|163752874|ref|ZP_02159998.1| arginyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161326606|gb|EDP97931.1| arginyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 592

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 120/561 (21%), Positives = 214/561 (38%), Gaps = 108/561 (19%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL +  SY     +        +G      G K V +E+ S N   P+H+GH R  
Sbjct: 79  KGFLNLVIDDSYYLNFFAE-ANKNDAFGHETSKAGDKAVMVEYSSPNTNKPLHLGHIRNN 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQ--QALYNNDSDLPEGY 200
           ++G ++A ++  SG +V +   IND G  I  + LA   F   +  Q+       L   Y
Sbjct: 138 LLGYSVAEIIKASGKKVYKTQIINDRGIHICKSMLAWQRFGNGETPQSTGLKGDKLVGNY 197

Query: 201 YPG---VYLKHVGKELADKYSSE--------LLNFPE--EKWLPIVKDYSVQAMMKIIR- 246
           Y      Y   + + +A+  + +        LL   E   KW     D  + A+ K +  
Sbjct: 198 YVAFDKAYKAEIAQLIAEGKTEDDAKKEAPILLEAQEMLRKWE--AGDEEIVALWKQMNQ 255

Query: 247 -------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---KS 296
                  +    L +  D    E D +             L  + +V EG++      K 
Sbjct: 256 WVYDGFAETYTNLGVDFDALYYESDTY-------------LLGKDFVKEGLVSGVFYMKD 302

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIY 354
             +  CD+  + L           ++ +L+SDG+  Y   D+  A  + K       MIY
Sbjct: 303 DGSVWCDLTEEGL----------DEKIVLRSDGTAVYMTQDIGTAIQRVKDYPDIGGMIY 352

Query: 355 VMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----- 408
            +G++   + K L  +   +  E    ++ L   +V L       KM  R G  +     
Sbjct: 353 TVGNEQDYHFKVLFLILKKLGFEWSKNLHHLSYGMVDLPSG----KMKSREGTVVDADDL 408

Query: 409 ------TLRHVVDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                 T + + +E                  +G  ++++ ML     + + FD     +
Sbjct: 409 MQEMVDTAKQIANEKGKLDGYSEEEKNSIHNKIGLGALKYQMLKVDPKKRILFDPEDSID 468

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            + ++  F +Q  Y R R+I R+A     + D+     N+     E    E +L+  L  
Sbjct: 469 FNGDSGPF-IQMMYVRTRAILRKA-----NFDYSEVITNI-----ELHEKEKELLKVLEN 517

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP VI+ A   Q P  +A Y +DL+  F  ++        +  +   ++   + R+QL  
Sbjct: 518 YPTVIQTAASNQSPALIANYAFDLSKEFSSYYQ------MVSILGETDKAKKVFRVQLSK 571

Query: 565 AVASIINSGLNIIGVESPNEM 585
            +   I     ++G++ P  M
Sbjct: 572 KIGDTIKLAFGLLGIQVPERM 592


>gi|261414873|ref|YP_003248556.1| arginyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371329|gb|ACX74074.1| arginyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325605|gb|ADL24806.1| arginine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 570

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 227/577 (39%), Gaps = 107/577 (18%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +I  P D +HG+  T     L++ L   P  IAE + A++++   +  V  A  G++N +
Sbjct: 26  LISVPPDTSHGNY-TIPCFSLAKTLRKAPKLIAEDLAAKVQLPAGLSKV-EAVNGYLNFF 83

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +   +L K  L+ I   G+EYG +    G  V I++ S N    +   H R  ++G++LA
Sbjct: 84  IDRGFLAKSTLNEIAAKGLEYG-HAASNGKVVCIDYSSPNIGKELAFHHLRSTMIGNSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +   +GY+V R  ++ D G     L   +    ++ L  +++ L              K
Sbjct: 143 RIYKAAGYKVERINHLGDWGTAFGKL---IVMYLREKLPTDEATLN---------ALTVK 190

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--------------LKALNIQHD 257
           EL   Y+S      EE   P ++D +  A  K+ + D              LK L   +D
Sbjct: 191 ELNILYASFSKASKEE---PGLEDEARAAFTKLEQGDEFYRKLWTAFRAATLKELMRIYD 247

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           +     D + G+                 +E  +P    +  +K  +   Q   R  ++ 
Sbjct: 248 MMGVGFDHYTGES---------------FFEDKIPAVLDELREKNLLVNSQE--RDVVML 290

Query: 318 DDVD-RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           D+ D  P L  KSDGS  Y   DLA   Y K +Y   FD  +YV+    + + K++  V 
Sbjct: 291 DEFDLNPCLIRKSDGSTLYATRDLAAAIYRKKEY--NFDKCLYVVDLGQALHFKQVFHVL 348

Query: 372 AAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------- 415
             +  +  K   ++    ++++  DG   K   R G    LR V++              
Sbjct: 349 KKMGREWYKDMYHIPFGVILQMV-DGKWEKGKTRTGTASLLRDVIEAAQKKILEFIDEKN 407

Query: 416 -----------EVGSDSVRFMMLWRKNSELLD--FDFCKVKE-QSKENPVFYVQYAYARC 461
                      ++G  ++ F  L  KNS L D  FD+  V   +    P  YVQ A+ R 
Sbjct: 408 PGLENKELIARQIGISALTFNDL--KNSRLKDVRFDWDAVMSFEGDTGP--YVQNAHVRL 463

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R+A    P  D D             D +   LI  LA+    I  A    EP  L
Sbjct: 464 CSIMRKAGYTVPVADVDYAQLT--------DDAAYSLINILAKKGEKILAAVKDDEPSVL 515

Query: 522 AFYLYDLASVFHGHWSHGR------ENPRLRFVQANN 552
           A Y  ++A   H      R      E  RL  VQ+  
Sbjct: 516 AQYALEIAEAAHKFIHEDRVLGSAEEKSRLFLVQSTQ 552


>gi|146304478|ref|YP_001191794.1| arginyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145702728|gb|ABP95870.1| arginyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 619

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 164/383 (42%), Gaps = 61/383 (15%)

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGD-PSPIRDIIDNLARQGYVYEG 289
           IV+ Y V  +++  R+ L  LNI+ D F  E D    G+  S +R  + + AR  Y    
Sbjct: 269 IVRKY-VNHVLEGFRESLGRLNIEFDEFDYESDLLWSGEVKSVLRSALSSRARIEY---- 323

Query: 290 ILPPPKSKTTQKCDMDR--KQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
                  K T+  D+D+     + +   +   ++ P   L +SDG+  Y   D+AY   K
Sbjct: 324 -------KGTEALDLDKYLDDEVRKELRIPAGLEIPPLVLTRSDGTTLYTVRDIAYTIRK 376

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +     + +I V+    +    +L A    +   +   N++      +   GM   MS R
Sbjct: 377 FLTSKAEQVINVIAEQQTVPQIQLRAALYLLGYPEMAKNLIHYSYSMVTLPGM--TMSGR 434

Query: 404 AGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            G +I+L  V                    + E+ + ++R+ +L     + + F+  KV 
Sbjct: 435 LGRYISLDEVYEKVKQAVEEKTKDRGNQVNIAEIVNSAIRYALLSVSADKPITFNVGKVT 494

Query: 444 EQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              ++N   Y+QY Y R  +I  +   +I  D+D+            +    + +L++ +
Sbjct: 495 -NFEQNSGPYLQYTYVRAYNILSKFTGEINLDVDY-----------GDLVGEKRRLLLAI 542

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P   +N+  + EP  L  YL  LA  F+  +       + R +Q  + K  M RL L
Sbjct: 543 AKFPETFKNSADSLEPELLVSYLRYLADTFNAWYD------KERVLQEQDEKKRMTRLNL 596

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V  V  ++ +GL ++G+ S  +M
Sbjct: 597 VKGVEVVMRNGLRVLGISSLTKM 619



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 88  FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+NL L  + L  ++ SS+     +YG   + K  ++ IE  SANP  P+H+GH R +++
Sbjct: 73  FLNLRLDETQLFMEVFSSM---DQDYGIEKVEKPKRIVIEHTSANPIHPLHIGHLRNSII 129

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GD L  L    G+EV   +Y+ND+G Q+  L
Sbjct: 130 GDALVRLSRARGHEVISRFYVNDSGRQVAIL 160


>gi|149173497|ref|ZP_01852127.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847679|gb|EDL62012.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 238

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 1   MYLFADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-RPL 57
           M + A+  SR +  L E   D    +E       +++  +D   G    N AM L+ R  
Sbjct: 1   MNILAEIRSRFEPVLTEWTDDPSSVIE-------MLKASQDAKFGDYQANFAMPLAARIP 53

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            L P  +A  IV ++ +    + + +AG GFIN+ L   +L     ++V      G    
Sbjct: 54  DLKPRDLATQIVEKVDLSDFCEPLEVAGPGFINIKLKQEWLNTQTQNLVADE-RLGVVPA 112

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV ++F + N   PMHVGH R  V+GD    ++ F G++V  + +I D G Q   +
Sbjct: 113 ESPQKVVVDFSAPNVAKPMHVGHLRSTVIGDANYRVLKFLGHDVVGDNHIGDWGTQFGMI 172


>gi|32490878|ref|NP_871132.1| hypothetical protein WGLp129 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340440|sp|Q8D372|SYR_WIGBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|25166084|dbj|BAC24275.1| argS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 576

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 214/541 (39%), Gaps = 88/541 (16%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           G+IN++L  S++   L  I  S  + G + + K T + I++ S N    MHVGH R  ++
Sbjct: 82  GYINIFLKKSWIEDNLLKIYHSN-KLGISKLKKKTII-IDYSSPNIGKEMHVGHMRSTII 139

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGV 204
           GD+++ ++   G++V R  +I D G Q   L L+ F   Q   ++    +DL E YY   
Sbjct: 140 GDSISLILELLGHKVIRANHIGDWGNQFGML-LAYFNEKQNLKFSEITCTDL-ENYYINA 197

Query: 205 YLKHVGKELADKYSSELLNFPEEK--------WLPIVKDYSVQAMMKIIRDDLKALNIQH 256
             K+  K+L  K  S+      +K        W  I  + S++   KI       LN  H
Sbjct: 198 KKKY-DKDLEFKKKSQFFTLKLQKKEKDCINIWKKIT-NLSIENNQKIYDQLNIKLNKTH 255

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
              + E  ++   P  I D+                P K+    K       L       
Sbjct: 256 --IMGESLYNDFVPYIISDL----------------PKKNLAINKSGNIMVILNNFKNKQ 297

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G  +   L K +G+Y Y   D+A  K +Y+      +IY   S  S   + L  V   V 
Sbjct: 298 GKSMGVILKKRNGTYLYSVIDIACIKYRYDFFKAQKIIYYTDSRQS---QHLLQVFDIVR 354

Query: 376 EKKAQINVLLCELVR----LYRDGMPIKMSKRAGDFITLRHV------------------ 413
           + K   N +  E  +    L +D  P K   R+GD I L  +                  
Sbjct: 355 KAKYIPNFVKLEHHKFGMVLKKDKTPFKT--RSGDTIKLSDLLKKSKEKAKKLIIKKNPN 412

Query: 414 --VDE-------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
             +DE       +G  S+++  L +       F++  +   +  N   Y+QYAY R  S+
Sbjct: 413 TSIDEIESLSQAIGIGSIKYFELSKNRETDYIFNWDNILSFN-GNTAPYIQYAYTRVISL 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            ++ K    +    L  +     E E D S     + L ++  +I + +    P+ L  Y
Sbjct: 472 IKKNKLKNKNNVKFLLKK-----EEEIDLS-----ICLLQFEEIINDVSKLGTPHILCNY 521

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LYDL+  F   +    EN  +  ++     +   RL L    +  +  GL ++G+    +
Sbjct: 522 LYDLSKTFSVFY----ENCSI--IKTKEESVKNSRLFLSILTSRTLKVGLELLGIPMVEK 575

Query: 585 M 585
           M
Sbjct: 576 M 576


>gi|258508781|ref|YP_003171532.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148708|emb|CAR87681.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650087|dbj|BAI42249.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 560

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 54/288 (18%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA----- 379
           KSDG+  Y   DLA    + E   F   +YV+G++   + ++L+AV   +  + A     
Sbjct: 299 KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYEWANDIHH 358

Query: 380 ----------------QINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVDEVGSD 420
                           + N++L E  ++ +D + +   ++ ++  D      V  EVG  
Sbjct: 359 IPFGLITANGKKLSTRRGNIILLE--KVLKDAVGLAQQQIDEKHPDLPNAEKVAHEVGVG 416

Query: 421 SVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           +V F  L  KN  L +FDF     V+ + +  P  YVQY  AR  SI R+A +I P    
Sbjct: 417 AVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARAHSILRKA-NIAP---- 467

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                   P+ +  D +   ++  L +YP ++  A    EP  +A Y   LA  F+ +++
Sbjct: 468 -------APEVALSDPAAWDVLRALGDYPSIVVRAAKEYEPSVIAKYALRLAKAFNKYYA 520

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +       V   + +L   RL +V A   ++ + L+++GV +P EM
Sbjct: 521 NVK-------VLVEDSELP-ARLAMVSATTQVLENALHLLGVAAPEEM 560



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P+    G  +      L++ L   P  IA  +VA+I   P  + V   G G++N Y
Sbjct: 27  LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIASDLVAKIDASP-FEQVKAVG-GYVNFY 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   S+  ++L +I  SG  +G   +G+G  V I+  S N   PM +GH R  V+G+ LA
Sbjct: 84  LDKISFAHEVLKAIAQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNALA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALS 180
           +++   GY   +  ++ D G Q   L ++
Sbjct: 143 NILQKVGYSPIKINHLGDWGTQFGKLIVA 171


>gi|115384424|ref|XP_001208759.1| arginyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114196451|gb|EAU38151.1| arginyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 666

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 202/531 (38%), Gaps = 110/531 (20%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ IEF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA   
Sbjct: 156 KIIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANG- 214

Query: 182 FWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            ++Y    + N+ +L   P  +   VY+K             + N   E+  PI +    
Sbjct: 215 -YKY----FGNEEELLKDPINHLFNVYVK-------------INNMVAEQDGPIKELKEQ 256

Query: 239 QAMMKIIRDDLKALNIQHD--IFISEDDFHR--------GDPSPI------RDIIDNLAR 282
               K   +D+  L  Q D  + +SED+  R        GD   +      RD+     R
Sbjct: 257 IKTKKEKNEDVSELQAQLDKLVDVSEDEKARRYFKSMEDGDQEALALWRRFRDLSIQKYR 316

Query: 283 QGY--------VYEGILPPPKS------KTTQKCDMDRKQ-----LLFRSTMVGDDVDRP 323
           Q Y        VY G             KT +K  +  K      + F            
Sbjct: 317 QTYARLNIDFDVYSGESQIKNESMTAAYKTMEKAGVSEKSDGAVIVDFTKHGAKKLGKAI 376

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372
           +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +            
Sbjct: 377 IVRKDGTPLYLTRDIGAILERDEAYHFDKMIYVVAMQQDLHLAQLFKITELMGYKDLASR 436

Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGS 419
                      +S +K  +   L ++++  RD M   M K    +  +       D +G 
Sbjct: 437 CQHVNFGMVRGMSTRKGTVK-FLDDILQDVRDKMHEVMKKNTEKYEQVADPEKTADILGI 495

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK-DIF----P 473
            SV    +  K     DF+   +   +    P  Y+QYA+AR  SI R++  D+      
Sbjct: 496 TSVMVQDMTGKRINGYDFNLEAMTSFEGDTGP--YLQYAHARLCSIVRKSGLDVTQLGSA 553

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +LD    P  V             L+  LA++P V+ N T   EP  +  YL+ +  +  
Sbjct: 554 NLDILTEPHAV------------NLVRLLAQWPDVLMNTTRTLEPTTIITYLFRMTHMLS 601

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +        +  V  +  ++ M R+ L  +   ++NSG+ I+G+ SP E
Sbjct: 602 SSYD-------VLKVVGSEPEVKMARMALYESARLVLNSGMRILGL-SPVE 644


>gi|296198734|ref|XP_002746843.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 578

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 132/584 (22%), Positives = 238/584 (40%), Gaps = 126/584 (21%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVHAKRLAEKLRCDTVVSEI-STGERTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
           G       +L  K  K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y
Sbjct: 113 GLKSELFSDLPQK--KIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINY 170

Query: 167 INDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSE 220
           + D G Q   L      + Y++ L +N    P  +   VY++ V KE AD     K + E
Sbjct: 171 LGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKSAQE 225

Query: 221 LLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                EE        W    +D S++  ++I     K L I  D + S + F+R      
Sbjct: 226 FFQRLEEGDVRALSLWQKF-RDLSIEEYIRI----YKRLGIYFDEY-SGESFYR---EKS 276

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYT 332
           ++++  L  +G + + I      K T   D+            GD      +++SDG+  
Sbjct: 277 QEVLKLLESKGLLLKTI------KGTAVIDLSGN---------GDPSSICTVMRSDGTSL 321

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V  
Sbjct: 322 YATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKLMGYDWAE----RCQHVPF 377

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--------------- 436
              G+   M  R GD   L  V++E+    ++ M   +   EL +               
Sbjct: 378 ---GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALII 434

Query: 437 ------------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
                       F++ +V  QS+ +   ++QY +AR  S+    ++ F            
Sbjct: 435 QDFKGLLLSDYKFNWDRVF-QSRGDTGVFLQYTHARLHSL----EETFG----------- 478

Query: 485 IPQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGH 535
               ++F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H  
Sbjct: 479 CGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAHKT 538

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                  P          ++   RL+L  AV S++ +G+ ++G+
Sbjct: 539 LQIKDSPP----------EVAGARLRLFKAVRSVLANGMKLLGI 572


>gi|294630717|ref|ZP_06709277.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834050|gb|EFF92399.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 590

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++    +P  +A  +VA++     +  + ++G GF+N+ +S    R I+ +
Sbjct: 41  FQANGILALAKKAKANPRELATQVVAQVTAGDLIKDIEVSGPGFLNITVSD---RAIVEN 97

Query: 105 IVVSGIE-YGRNLIGK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +     +  GR  + +    GT V I++   N    MHVGH R AV+GD L  L+ F+G 
Sbjct: 98  LAARATDPAGRLGVPQADHPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDALVQLLEFTGE 156

Query: 160 EVTREYYINDAGAQINTL 177
            V R ++I D G Q   L
Sbjct: 157 SVVRRHHIGDWGTQFGML 174



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 51/296 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSDG Y Y A DL+  + + +      ++YV+ +  S + K +   A        
Sbjct: 313 PLIVQKSDGGYGYAATDLSAIRDRVFNLKASTLLYVVDARQSLHFKMVFETARRAGWLGD 372

Query: 380 QINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +    L     L +DG P K   RAG+ + L+ ++D                       
Sbjct: 373 DVTAHQLAFGTVLGKDGKPFKT--RAGETVKLQDLLDSAVERATAVVREKAEKVGLTEEE 430

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L         FD  ++   + +  V Y+QYAYAR +SI R+A 
Sbjct: 431 IVENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAG 489

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +  P              E E   +E +L + L  +   +     + EP+KLA YLY LA
Sbjct: 490 EARP----------AAHPELELAPAERELGLQLDRFGETVLEVAASYEPHKLAAYLYQLA 539

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S+    +   +          N  ++   RL LV   A  ++ G+ ++G+ +P  +
Sbjct: 540 SLLTTFYDQCQ-----VLSPDNAPEVVENRLFLVDLTARTLHQGMTLLGIRTPERL 590


>gi|207366683|emb|CAR64264.1| arginyl-tRNA synthetase [Glycine max]
          Length = 597

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + I+  +     ++S  +AG GF+N+ LS  ++ + L  +++ GI+     +   
Sbjct: 75  PQAVGQAILNHLPQSEMIESCSVAGPGFVNIVLSKKWIAQRLERLLIDGIDKWAPRLPVK 134

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE-VTREYYINDAGAQINTLAL 179
           T V ++F S N    MHVGH R  ++GDTLA +  FS  E + R  ++ D G Q   L  
Sbjct: 135 T-VLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHLGDWGTQFGMLIA 193

Query: 180 SVFWRY 185
            +F  Y
Sbjct: 194 HLFDTY 199



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 15/134 (11%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           K N   Y+QYA+AR  SI R++     ++  +    N++    +    E  L +HL ++P
Sbjct: 474 KGNTAVYLQYAHARICSIMRKSGKDMEEIKKN---GNIVSNHED----ERALGLHLIQFP 526

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V E +     P  L  YLY+L  +F   +            Q         RL L  A 
Sbjct: 527 EVFEESLTNLLPNVLCEYLYNLTEIFTKKFYTN--------CQVVGSPEETSRLLLCEAT 578

Query: 567 ASIINSGLNIIGVE 580
            +++     ++G+E
Sbjct: 579 VTVMRQCFYLLGIE 592


>gi|196046133|ref|ZP_03113361.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023188|gb|EDX61867.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 562

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 125/300 (41%), Gaps = 77/300 (25%)

Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG+  Y   DL A    +   GFD  +YV+G + S +                Q   +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345

Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416
           L +L   + DGM   P         KMS R G  I L  V++E                 
Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLE 405

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465
                   VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI 
Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++ +V+E A    EP  ++ Y+
Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFSQVVEAAFNKNEPSIISKYV 510

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|148224766|ref|NP_001085437.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Xenopus
           laevis]
 gi|82184665|sp|Q6GQJ7|SYRM_XENLA RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|49117831|gb|AAH72745.1| MGC79100 protein [Xenopus laevis]
          Length = 580

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 127/563 (22%), Positives = 219/563 (38%), Gaps = 92/563 (16%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRN--LIGKGT 121
           AE +  ++  D  +  +    +G +   ++   L R +L  I   G  YG N  L  + +
Sbjct: 68  AEQLAGKLVCDSVISDIGTT-RGSVTFKINRDLLTRNVLQQISKDGSLYGLNTELFSELS 126

Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178
             K  +E+ S N     HVGH R  ++G+ +A+L    G EV R  Y+ D G Q   L  
Sbjct: 127 RRKTIVEYSSPNIAKKFHVGHLRSTIIGNFIANLKQAVGNEVVRINYLGDWGLQFGLLGA 186

Query: 179 -LSVFWRYQQALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFPEEKWLPI--- 232
             S F   ++ L N    L E Y        K  G +L+ +     L   +   L +   
Sbjct: 187 GFSSFGSKEKLLANPLQHLFEVYVKVNTAAEKDNGIKLSAQEFLRRLEGGDPHALSLWMH 246

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +D S+Q   KI     K L    D + S + F++      ++++  L  +G +      
Sbjct: 247 FRDISIQEYAKIY----KRLGAHFDDY-SGESFYK---EKSQEVLKQLESKGLLL----- 293

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
             K+      D+  +  L   + V        ++SDG+  Y   D+A    + ER  FD 
Sbjct: 294 --KTDKGTVIDLSEEGNLSSYSTV--------MRSDGTSLYITRDMAAAVDRMERYNFDE 343

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           MIYV       + ++L  +   + + +A      C+ V     G+   M  R G+ + L 
Sbjct: 344 MIYVTDKSQKNHFQQLFKILKIMGKDQAD----RCQHVPF---GLVQGMKTRRGEVVFLE 396

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLD---------------------------FDFCKVKE 444
            V+DE  S  ++ M     + +L D                           FD+ +  +
Sbjct: 397 DVLDEARSRMLQNMAASETSKQLDDPSDTAEKIGIAALIVQDFKGQLVSDYHFDWDQALQ 456

Query: 445 QSKENPVFYVQYAYARCRSI--FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            + +  VF +QY +AR  S+   R  +D     DF++         S  +   +  + HL
Sbjct: 457 STGDTGVF-LQYTHARLHSLQALRCPRDT---EDFEI--------ASLREPCVIATLQHL 504

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             Y  VI       +P  L  YL  L     GH ++     R   V+ ++ +    RL  
Sbjct: 505 LRYDEVIYKCLEDLQPRYLVTYLLSL-----GHLANVAH--RTLQVKGSSSEAAHARLLF 557

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              V  ++ +G+ ++G+   N M
Sbjct: 558 FKNVQMVLGNGMKLLGITPVNNM 580


>gi|167957304|ref|ZP_02544378.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 237

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 3/146 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGK-GF 88
           + +  P          + A  LS+ L   P  I E I   +      D D    A + GF
Sbjct: 30  VTVTVPTQLDKADFVCDVAFRLSKILHTAPYVIGESIAKEVNSTQLQDGDYTLEAARPGF 89

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN++L+   L KIL  I  +   YGRN I  G +  IE  S NP   MH+GH R  ++G 
Sbjct: 90  INVHLTDVSLSKILIHINDTNQNYGRNDILAGQRWVIEHTSPNPNKAMHIGHLRNNLIGM 149

Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174
            +A++ A+ G  V R+   N+ G  I
Sbjct: 150 AVANIAAYCGASVVRDCIDNNRGIAI 175


>gi|67540396|ref|XP_663972.1| hypothetical protein AN6368.2 [Aspergillus nidulans FGSC A4]
 gi|40739562|gb|EAA58752.1| hypothetical protein AN6368.2 [Aspergillus nidulans FGSC A4]
 gi|259479413|tpe|CBF69611.1| TPA: arginyl-tRNA synthetase (AFU_orthologue; AFUA_2G14030)
           [Aspergillus nidulans FGSC A4]
          Length = 650

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 118/535 (22%), Positives = 208/535 (38%), Gaps = 115/535 (21%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA--L 179
           K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA   
Sbjct: 160 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANGY 219

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             F   Q+ L +  + L E     VY+K             + N   E+  PI +     
Sbjct: 220 KKFGDEQKLLQDPINHLFE-----VYVK-------------INNIVSEQEGPIKELKEQI 261

Query: 240 AMMKIIRDDLKAL--NIQHDIFISEDDFHR--------GDPSPI------RDIIDNLARQ 283
              K   +D+  L   +   + +SED+  R        GDP  +      RD+     R+
Sbjct: 262 KAKKEKNEDVSKLEQELAKLVDVSEDENARRYFKSMEDGDPDALSLWRRFRDLSIKKYRE 321

Query: 284 GY--------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD------VDRP------ 323
            Y        VY G     +S+  Q+  M +   + +ST V ++      VD P      
Sbjct: 322 TYARLNIDYDVYSG-----ESQIKQES-MSKANEILQSTGVSENSDGATIVDFPKHGAKK 375

Query: 324 -----LLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----- 372
                +++ DG+  Y   D+ A F+      FD MIYV+ +    ++ +L  +       
Sbjct: 376 LGKAVIVRKDGTPLYLTRDIGAIFERDEAYHFDKMIYVVAAQQDLHLAQLFKIVELMGFK 435

Query: 373 ---------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--- 414
                           +S +K  +   L +++R   D M   M K    +  + + V   
Sbjct: 436 DLASRCQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHETMKKNEEKYAQIENPVETA 494

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK---D 470
           D +G  SV    +  +     DF+   +   +    P  Y+QYA++R  SI R+A+   +
Sbjct: 495 DILGITSVMVQDMSGRRINGYDFNLDAMTSFEGDTGP--YLQYAHSRLCSILRKAEANVE 552

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
             P  + DL            ++  + L+  L+ +  ++       EP  +  YL+ L  
Sbjct: 553 ELPSANLDLLT----------ESHAVNLVRLLSSWHDILMMTNKTLEPTTILTYLFRLTH 602

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    +        +  V  +  +L   RL L  A   ++++G+ I+G+   + M
Sbjct: 603 MISSSYD-------VLQVIGSEPELKKARLALYEAARQVLHNGMRILGLSPVSRM 650


>gi|229133023|ref|ZP_04261864.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228650441|gb|EEL06435.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 562

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           KSDG+  Y   DL    Y +  YE  FD  +YV+G + S +                Q  
Sbjct: 300 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 343

Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416
            +L +L   + DGM   P         KMS R G  I L  V++E               
Sbjct: 344 TVLKKLGYDWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN  + + +F     +K + +  P  YVQY +AR  S
Sbjct: 404 LKQKEDVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+    F    F L        + ++  S ++L   L ++P+VIE A    EP  ++ 
Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y+ D+A  F+ ++ +      +R ++ +  K +  RL L +AV  ++  GL ++GV +P 
Sbjct: 509 YVLDVAQAFNKYYGN------VRILEESEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 560

Query: 584 EM 585
           EM
Sbjct: 561 EM 562



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L +     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQNEFGD-AAFPCFSLVKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++K DP    V   G  ++N++ +   +  K+L  I+V   EYG+N  G    V 
Sbjct: 59  KELAEKLK-DPFFTKVEAVGP-YVNVFFNRETVSDKVLKIILVEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|167461684|ref|ZP_02326773.1| arginine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 367

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 56/297 (18%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           + KSDG+  Y   DLA    +++  +G D ++YV+G +   + K++ AV      K  + 
Sbjct: 92  ITKSDGTTIYPTRDLATAIYRHDVMKG-DKLLYVVGGEQKLHFKQVFAVLG----KLGKT 146

Query: 382 NVLLCELVRL-YRDGMPIKMSKRAGDFITLR-------------------------HVVD 415
            V  CE V          KMS R G  ++L                          HV +
Sbjct: 147 WVESCEHVPFGLMKFAGKKMSTRRGRVVSLEEVLQEAVNRAREIIEEKNPLLPDKEHVAE 206

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
            VG  ++ F  L  KN+ + + DF     +    +  P  YVQY +AR +S+  +A    
Sbjct: 207 AVGIGAIVFGDL--KNNRVNEIDFSLDEALNFDGETGP--YVQYTFARTQSVLAKA---- 258

Query: 473 PDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            + +F L     I   S+ ++    S  QLI  L+ YP+ IE A    EP  +A Y  + 
Sbjct: 259 -EWNFSLADCKNILSHSDLNSINHSSVWQLIKQLSLYPQAIERAVKRNEPSVVARYALET 317

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+  ++  R       + A + K    +L +  A A II   L+++G+++P +M
Sbjct: 318 AKAFNRFYNLNR-------ILAEDEKEQKAKLIVTTAAAEIIRRSLHLLGLKTPKQM 367


>gi|308068745|ref|YP_003870350.1| Arginyl-tRNA synthetase (arginine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305858024|gb|ADM69812.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 576

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 128/559 (22%), Positives = 218/559 (38%), Gaps = 111/559 (19%)

Query: 84  AGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A   ++N+ L  S ++  +L+ +  S  ++ R  IG G +V I+  S N   P  +GH R
Sbjct: 72  ASGAYVNITLDRSVHIPLMLAEL--SKADFLRPNIGHGQRVVIDMSSPNIAKPFGIGHLR 129

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYY 201
             V+G  L  ++  +GY      ++ D G Q    +A    W  ++ L ++    P G  
Sbjct: 130 STVIGAALYRILDETGYIPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHD----PIGES 185

Query: 202 PGVYLK-HVGKELADKYSSELLNF----------PEEKWLPIVKDYSVQAMMKIIRDDLK 250
             +Y++ H   E       E   +           ++ W     ++ V+  +       +
Sbjct: 186 LKLYVRFHQEAEHDPTLEDEGREWFRRLEHGDAEAQQLW-----EFFVEVSLGEFDRMYQ 240

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            LNI  D  + E  ++      ++ ++  L  +G + E                    LL
Sbjct: 241 RLNITFDHVLGESFYN----DKMQTVVAQLRAKGLLEE----------------SDGALL 280

Query: 311 FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKR 366
            R     +D + P   +LK DG+  Y   DLA    ++E    D ++YV+G +   + ++
Sbjct: 281 VRL----EDEELPPCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQ 336

Query: 367 LEAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
           + AV     E  A+     CE V   L R     KMS R G  + L  V+DE        
Sbjct: 337 VFAVLKHAGEAWAE----QCEHVPFGLMRFAGK-KMSTRRGKVVKLEEVLDEAIARAQAI 391

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAY 458
                            VG  ++ F  L  KN+ L + DF   +  + E     YVQY +
Sbjct: 392 ITQKNPDLQEQQAVAEDVGIGAIIFGDL--KNNRLNEVDFSLEEALTFEGETGPYVQYTH 449

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESE-----------FDTSELQLIVHLAEYP 506
           AR RS+  +A     D+D +  P  N + Q+S               +   L+  L  Y 
Sbjct: 450 ARIRSLLEKAY-ARADVDVNTNPSDNDLVQDSHSRDLNDVLDGMLGNAGWALLKQLGRYH 508

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +  A    EP  +A +  D A  F+  ++      + R V          R+QL    
Sbjct: 509 GQLIRAARQLEPSVIARFALDTAQAFNRFYA------KERIVDGGQ-----WRIQLAEQT 557

Query: 567 ASIINSGLNIIGVESPNEM 585
           A I+   L ++G+++PN M
Sbjct: 558 ADILACALQLLGLKAPNRM 576


>gi|269838307|ref|YP_003320535.1| arginyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787570|gb|ACZ39713.1| arginyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 724

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 72/366 (19%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQL 309
           L++  D++  E +       P R I+  L  +G   + +G+   P  K  +K  ++++  
Sbjct: 399 LDVHFDVWFYESEVE----EPGRQIVQELLERGIAEISDGL---PVVKIDEKLGLEKE-- 449

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368
            +R+         P+L+SDG+  Y   DLA  K K+E+   D  I+V+    S Y +++ 
Sbjct: 450 TYRTL--------PILRSDGTTLYSTKDLALTKMKFEQYHVDRSIWVVDVRQSLYFQQIF 501

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDE- 416
            +      ++A+    L     +   G    MS R+G+ +             R ++DE 
Sbjct: 502 KIMELWGFEQAEKCYHLSYETVMLPTGA---MSSRSGNVVLYEDIAARVLQRAREIIDEK 558

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYAR 460
                          VG  S+++ ML R N+ +L FD  +    +    P  Y+QYA+AR
Sbjct: 559 NPSLPDEVKDRIANDVGLGSMKYGMLMRDNNRVLVFDIEEALSFEGHAAP--YIQYAHAR 616

Query: 461 CRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
              I  +   I  + L F           ++  T E+ LI  +A +P  +E A    +P 
Sbjct: 617 ACRILEKVDQIPTEGLTF-----------TDLTTEEINLIQQVAIFPSEVERAAAEYKPL 665

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y+Y+LA  F+  +   R  P L   QA   + +     +  A  ++ N GL ++G+
Sbjct: 666 VIANYVYELAKRFNDFY---RACPVL---QAEEPQRSARLALVAAARQTLAN-GLGLLGI 718

Query: 580 ESPNEM 585
            +P  M
Sbjct: 719 AAPETM 724



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 7/126 (5%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINL-YLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE +  R++      SV  A  G+IN+ + +  +  +++ +++ +G +YGR    K  
Sbjct: 86  AIAEQVAERLRAADGFASV-EAVNGYINIGFDTNRFSNEVVHAVLTTGEDYGRGE-PKTD 143

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +V +E+   N     HVGH R   +G+ L+ +M F+G++V +  YI D G  +    +  
Sbjct: 144 RVMVEYSQPNTHKAFHVGHLRNVCLGNALSRIMKFAGFDVLQANYIGDIGLHV----IKT 199

Query: 182 FWRYQQ 187
            W YQ+
Sbjct: 200 LWCYQR 205


>gi|330861410|emb|CBX71639.1| hypothetical protein YEW_GQ28430 [Yersinia enterocolitica W22703]
          Length = 199

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G    N  M +++ LG+ P  +AE ++  + +D     V IAG GFIN++L   ++   +
Sbjct: 37  GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKV 96

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +   + G   +   T V +++ + N    MHVGH R  ++GD     + F G+ V 
Sbjct: 97  EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154

Query: 163 REYYINDAGAQINTL 177
           R  ++ D G Q   L
Sbjct: 155 RANHVGDWGTQFGML 169


>gi|325283885|ref|YP_004256426.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315694|gb|ADY26809.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 609

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           LD  + E P     G   T AA  L++ LG +P  +A+ +   I++   +  V  AG  F
Sbjct: 22  LDPAIQETPA-GKKGDYGTPAAFQLAKMLGRNPAEVAQDLARSIQLPAGIARVEAAGP-F 79

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N ++        ++  V   +E    +  +  KV IE  S NP   +HVGH R  V+GD
Sbjct: 80  LNFFVD-------VADFVRGVVENPTPMPQQEGKVVIEHTSVNPNKELHVGHLRNVVLGD 132

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +LA +M  +G+ V  + YI+D G Q    A S+F R
Sbjct: 133 SLARIMRAAGHTVEVQNYIDDTGRQA---AESLFAR 165



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 12/177 (6%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   +G  ++RF ML  + +  +DF +      + +    YVQYA  R  +I R+A+  
Sbjct: 442 EIARRIGIGAIRFAMLKAEPTRQIDFRWDSALALTGDT-APYVQYAAVRAGNILRKAEAE 500

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              +D        +P        +L L   +A  P V+E AT    P+ +A Y  DLA+ 
Sbjct: 501 GYAVDGSGADWAALPD------IDLALAKAVARLPEVVEQATRIHSPHVVAQYALDLATT 554

Query: 532 FHGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  W + ++    P    +Q+    L   RL LV  V       L++IG+E P  M
Sbjct: 555 FN-SWYNAKDKVGKPATNVLQSPE-GLREARLALVGRVRRAFEETLDLIGIEVPAAM 609


>gi|281208239|gb|EFA82417.1| arginyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 711

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 132/632 (20%), Positives = 242/632 (38%), Gaps = 151/632 (23%)

Query: 53  LSRPLGLDPLTIAELIVARIK--IDPDVDSVFI-----AGKGFINLYLSPSYLRKILSSI 105
           LSR LG D   I E +   I+  ID + D + +       K F+N+ LS  YL + L+  
Sbjct: 132 LSRQLGGDNKKIVEQMRQLIQKDIDENRDGMSLIKDVSVEKNFVNVSLSQDYLEQSLAVW 191

Query: 106 V---------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +             +    L  +  +V ++F S N +  +HVGH R   +G+++  ++ +
Sbjct: 192 LKGEAPLYELTKQHKQSLQLPLEPKEVLVDFASPNMSKELHVGHLRSLALGESVCRILEY 251

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
             + V R   ++ AG     + + + +    AL N             +L+H+     DK
Sbjct: 252 RNHRVER---VSHAGDFGTPMGMVISY----ALENK----------AEFLRHIW----DK 290

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-----ISEDDFHRGDPS 271
            S  L + P   ++P  K  S       I  D K L      F     ++  +  +G P+
Sbjct: 291 QSG-LSSMP---FIPTPKQLST------IYSDAKKLTKTDSEFSKRAHLAAAELQKGPPT 340

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL------FRS-TMVGD------ 318
                 +N      +Y   L        ++ +   +++L       RS  MV +      
Sbjct: 341 TTSGDNNNGGSDPDIYRAWLDLMDINVKERGESWYREMLEPAIEELRSLNMVSESEGAVC 400

Query: 319 ----DVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVA 371
               D   P++  KSDG+Y Y   D+A  K +        + ++  D    + +++  +A
Sbjct: 401 VFLEDQKTPVIIKKSDGAYLYATTDIAAIKNRLVTNKKQWVIIITDDSQKQHFQQVFTIA 460

Query: 372 AAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---------- 417
                   + + +++ L   +VR   +G+  K+S R GD + L  ++ E           
Sbjct: 461 QLAGWYRPDTEHRVDHLSFGVVR-GENGL--KLSSREGDPLALEELLQEAIQRAKDATIT 517

Query: 418 --------------------GSDSV--RFMM----LW------------------RKNSE 433
                               G+D V  RF +     W                  R NS 
Sbjct: 518 SRSLTRAEKLDQTHTAQQLDGADRVEDRFELDQYNTWEHYRKIGLGAIKYFDLSQRSNSY 577

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              FD        K N   Y+ Y Y R  ++ ++A+     +D + F      +  EF  
Sbjct: 578 TFSFDRML---SFKGNTSIYILYCYTRISTLMKRAQFDINAIDLNTF------KFKEFSE 628

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E +L++ ++++P VI        P  L  YL+D++  FH  +   R       VQ    
Sbjct: 629 KERKLVLMISKFPDVIRATESTLRPAVLCDYLWDISDCFHHFYESERVIGSDTMVQ---- 684

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +L + H + +IIN+G +++G+E+ + +
Sbjct: 685 -----KLLIAHVIQNIINTGFHLLGLETVDRL 711


>gi|297291297|ref|XP_001092575.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial [Macaca
           mulatta]
          Length = 593

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 240/580 (41%), Gaps = 118/580 (20%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 72  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 127

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 128 GLKSELFSGLPRKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 187

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD  S         
Sbjct: 188 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKSAQEFF 242

Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           + L   + + L +    +D S++  +++     K L +  D + S + F+R      +++
Sbjct: 243 QRLELGDVQALSLWQKFRDLSIEEYVRV----YKRLGVYFDEY-SGESFYR---EKSQEV 294

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +  L  +G + + I      K T   D+            GD      +++SDG+  Y  
Sbjct: 295 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDSSSICTVMRSDGTSLYAT 339

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V     
Sbjct: 340 RDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 392

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437
           G+   M  R GD   L  V++E+    ++ M   +   EL                  DF
Sbjct: 393 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 452

Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + +         QS+ +   ++QY +AR  S+    ++ F                
Sbjct: 453 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL----EETFG-----------CGYL 497

Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539
           ++F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H      
Sbjct: 498 NDFNTACLQEPQSVSILQHLLRFDEVLYKSSQDLQPRHIVSYLLTLSHLAAVAH------ 551

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
               R   ++ +  ++   RL L  AV S++ +G+ ++G+
Sbjct: 552 ----RTLQIKDSPPEVAGARLHLFKAVRSVLANGMKLLGI 587


>gi|290958345|ref|YP_003489527.1| arginyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260647871|emb|CBG70976.1| putative arginyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 589

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 7/134 (5%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N  + L++    +P  +A  +VAR++    +  + ++G GF+N+ L+   + + L++   
Sbjct: 43  NGILALAKKAKANPRELATQVVARVESGELIGEIEVSGPGFLNITLTDRAITQNLAARYA 102

Query: 108 SGIEYGRNLIGK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
              + GR  +      GT V I++   N    MHVGH R AV+GD +  ++ F+G  V R
Sbjct: 103 D--DTGRLGVPTAERPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVQILEFTGENVVR 159

Query: 164 EYYINDAGAQINTL 177
            ++I D G Q   L
Sbjct: 160 RHHIGDWGTQFGML 173



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 55/298 (18%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSE 376
           PL+  KSDG Y Y A DL+  + + +    ++++YV+ +  S + K +   A     +++
Sbjct: 312 PLIVKKSDGGYGYAATDLSAIRDRVFHLKANSLLYVVDARQSLHFKMVFETARRAGWLND 371

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
              +   L    V L +DG P K   R G+ I L  ++DE                    
Sbjct: 372 DDVKAFQLAFGTV-LGKDGKPFKT--REGETIRLVDLLDEAIDRATAVVREKAEKVGLTE 428

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  +V++  L         FD  ++   + +  V Y+QYAYAR +SI R+
Sbjct: 429 DEIVENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRK 487

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A +  P              E E   +E  L +HL ++   +     + EP+KLA YL+ 
Sbjct: 488 AGEAGP----------AAHPELELAPAERALGLHLDQFGEAVAEVAESYEPHKLAAYLFR 537

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA++    +    + P L+   A +      RL LV   A  ++ G+ ++G+ +P+++
Sbjct: 538 LATLLTSFYD---QCPVLK---AESPAQVENRLFLVDLTARTLHRGMALLGIRTPDKL 589


>gi|330834376|ref|YP_004409104.1| arginyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566515|gb|AEB94620.1| arginyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 619

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +YG   + +  K+ IE  SANP  P+H+GH R A++GDTL  L    G++V   +Y+ND+
Sbjct: 95  DYGLEKVERPKKIIIEHTSANPIHPLHIGHLRNAIIGDTLVRLSKARGHDVISRFYVNDS 154

Query: 171 GAQINTL 177
           G Q+  L
Sbjct: 155 GRQVALL 161



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/382 (21%), Positives = 165/382 (43%), Gaps = 60/382 (15%)

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-PSPIRDIIDNLARQGYVYEG 289
           +V+ Y V  +++  R+ L+ L I  D F  E D    G+  S +R  + + AR  Y    
Sbjct: 270 VVRKY-VNYVLEGFRESLEKLGITFDYFDYESDILWSGEVKSVLRSALSSKARIEY---- 324

Query: 290 ILPPPKSKTTQKCDMDR--KQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
                  K T+  ++++   + + R   + + ++ P   L +SDG+  Y   D+AY   K
Sbjct: 325 -------KGTEALELNKYVDEEIRRELRIPEGLEIPPLVLTRSDGTTLYTVRDIAYTIRK 377

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +     + +I V+    S    +L A    +   +   N++      +   G    MS R
Sbjct: 378 FISTNAEQVINVIAEQQSVPQIQLRAALYLLGYPEMAKNLIHYSYSMVTLPGT--TMSGR 435

Query: 404 AGDFITLRHVVD-------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            G +I+L  + D                   E+ + ++R+ ++    +  + F+  KV  
Sbjct: 436 LGRYISLDEIYDKVMLTVLEKTKDRGGVNVAEIVNSAIRYAIISVSANRPITFNVSKVT- 494

Query: 445 QSKENPVFYVQYAYARCRSIF-RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
             ++N   Y+QY Y R  +I  +   +I  ++D+           ++    + ++++ L 
Sbjct: 495 NFEQNSGPYLQYTYVRAYNILAKYPHEINLNVDY-----------TDVVMEKRKILMALL 543

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P V + +  + +P  L  YL  LA  F+  +       + R +Q  + +  M RL LV
Sbjct: 544 KFPEVFKVSADSLQPETLVSYLRSLADSFNSWYD------KERVIQEPDERKRMTRLNLV 597

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             V ++I +GL ++G+ S  +M
Sbjct: 598 KGVETVIRNGLQVLGISSLTKM 619


>gi|126662120|ref|ZP_01733119.1| arginyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625499|gb|EAZ96188.1| arginyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 595

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 125/303 (41%), Gaps = 50/303 (16%)

Query: 315 MVGDDVDRPL-LKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +  D +DR + L+SDG+  Y   D+  A  + K       M+Y +G++   + K L  + 
Sbjct: 311 LTADGLDRKIVLRSDGTAVYMTQDIGTAIQRVKDFPDVGGMVYTVGNEQDYHFKVLFLIL 370

Query: 372 AAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDEVG- 418
             +    A  +  L   +V L       KM  R G  +           T + + +E+G 
Sbjct: 371 KKLGFDWADSLYHLSYGMVELPSG----KMKSREGTVVDADDLMAEMTTTAQAISEELGK 426

Query: 419 ----SDSVRFMMLWRKNSELLDFDFCKV--KEQSKENPV----------FYVQYAYARCR 462
               S+S +  +        L +   KV  K+Q   NP            ++QY YAR +
Sbjct: 427 LEGYSESEKSKLYTTIGLGALKYYMLKVDPKKQMMFNPEESVDFAGNTGSFIQYTYARIQ 486

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A       DFD F   V   E E    E +LI  +  +P VI+NA     P  +A
Sbjct: 487 SILRKA-------DFD-FENVVTSSEVEMHEKEKELIKQVQLFPEVIQNAAENHSPALIA 538

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y YDL   F+  +       ++  +   N    + R+QL  +V + I +   ++G+E P
Sbjct: 539 NYTYDLVKEFNSFYQ------QVSILGEENHDKKVFRVQLSKSVGNTIKNAFQLLGIEVP 592

Query: 583 NEM 585
             M
Sbjct: 593 ERM 595



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 8/160 (5%)

Query: 22  IKVEKKILD--RIVIERPR-DCAHGHLSTNAAMI---LSRPLGLDPLTIAELIVARIKID 75
           + ++K +L+   I IE+            +  M+   L + L  +P+ I   I   +  +
Sbjct: 9   VHIQKAVLELFNISIEKVEFQATRKEFEGDVTMVVFPLVKALKGNPVEIGNQIGNYLVAN 68

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTG 134
               + F    GF+N+ +S +Y  +  +SI  +   +G     +G K V +E+ S N   
Sbjct: 69  IHEVAKFNVVGGFLNIVISDAYYIEFFNSIK-NNETFGFLAPKEGEKAVMVEYSSPNTNK 127

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           P+H+GH R  ++G ++A ++  SG +V +   IND G  I
Sbjct: 128 PLHLGHIRNNLLGYSVAEIIKASGKKVYKTQIINDRGIHI 167


>gi|289643118|ref|ZP_06475248.1| Arginine--tRNA ligase [Frankia symbiont of Datisca glomerata]
 gi|289507082|gb|EFD28051.1| Arginine--tRNA ligase [Frankia symbiont of Datisca glomerata]
          Length = 344

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 17/183 (9%)

Query: 410 LRHVVDEVGSDSVRFMML-------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           L  +V  VG+D+ R+ +          ++ +L+D D   +  Q+  NPVF VQYA+ R  
Sbjct: 172 LADLVSTVGTDAARYSLARLPPGSAGARDIDLIDLDV--ITRQANGNPVFRVQYAHTRIC 229

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            + R A  +   +D +    +++    E D     L+  L + PR +  A     PY++A
Sbjct: 230 LLLRNAGQLGLGVDVEGADVSLLTHPREGD-----LLRALGDLPRAVAAAAELWAPYRVA 284

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL +LA  +  H  HG      R   A    LT  RL L  A   ++  GL+++GV +P
Sbjct: 285 RYLEELADTY--HRFHGVCEVLPRGNDAAG-ALTGARLLLADATRIVLAGGLHLLGVSAP 341

Query: 583 NEM 585
             M
Sbjct: 342 TRM 344



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 4/121 (3%)

Query: 5   ADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           AD +  L+  + ++  D ++ VE   +  + +ERPR   HG  +T  A+ L+RP    P 
Sbjct: 4   ADLAETLRAIVCDLVADDELDVEAPTM--VPVERPRIAGHGDYTTAIALRLARPARRPPR 61

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE + AR+++D  V  V +A  GF+N+ L+     +I   IV +G  Y R+   + T 
Sbjct: 62  EIAEAVAARLRLDQAVSGVDVAAGGFLNIRLASDARGEIARMIVRAGDGYVRDTAARDTA 121

Query: 123 V 123
            
Sbjct: 122 A 122


>gi|225154902|ref|ZP_03723400.1| Arginine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224804432|gb|EEG22657.1| Arginine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 606

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 4/145 (2%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKGFINLYL 93
           R  D  HG    N  +  ++    +P  +AE + A +   +  D D + IAG GFIN  L
Sbjct: 34  RTADPKHGDYQANGVLGYAKREKQNPRALAEKLTAALPPPLRADFD-ITIAGPGFINFTL 92

Query: 94  SPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            PS  +  L++      +  G      G    +++ S N    MHVGH R AV+G+ +  
Sbjct: 93  RPSAAQAWLNAYGTRQKLGAGAAAACAGQTWVVDYSSPNTAKQMHVGHLRSAVIGEAICR 152

Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177
           L+AF+G  V R+ ++ D G Q   L
Sbjct: 153 LLAFAGARVIRDNHLGDWGTQFGKL 177



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 12/179 (6%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  SV++  L +  S    F + K+      N   Y+ YA AR RSIFR+   
Sbjct: 436 REIARAVGVGSVQYADLSQNRSSNYVFSWDKMLALDG-NTAPYLLYAVARIRSIFRKLGL 494

Query: 471 IFPDL---DFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
             PD    D      +     S+ +T +E+ L   L + P  +  AT    P+ L  YLY
Sbjct: 495 PPPDQESGDEGQRAEDYAAAASQIETPAEMSLARKLVKLPDTLALATGQLRPHFLCLYLY 554

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LA  F   ++  +       V  ++  +   RL L      ++ +GL+++G+ +   M
Sbjct: 555 ELAGEFSAFYAAEK-------VAVDDPAVRARRLLLCARTLLVLETGLHLLGLRTLERM 606


>gi|149179591|ref|ZP_01858117.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148841572|gb|EDL56009.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 109

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +E PRD +HG L+TNAAM+L++    +P  +AE IV  +  +PD+    IAG GFINL
Sbjct: 37  VTVEPPRDPSHGDLATNAAMVLAKKAKTNPRALAEKIVEHLTREPDITEASIAGPGFINL 96

Query: 92  YLSP-SYLRKI 101
            LS  ++LR++
Sbjct: 97  CLSEQAWLREL 107


>gi|317127046|ref|YP_004093328.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471994|gb|ADU28597.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 561

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+    G L+      LS+ L   P  IA  I  +++    + SV + G  ++N++
Sbjct: 28  LIEKPKYENLGDLAF-PCFQLSKLLRKSPAIIANEIAEKLQ-SSSISSVEVKG-AYVNVF 84

Query: 93  LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
                + K I+  ++  G  YG N +    KV I+F S N   P  +GH R  V+G+ LA
Sbjct: 85  FDKVLVGKAIIDKVIARGTSYGSNDVNSRGKVVIDFSSPNIAKPFSMGHLRSTVIGNALA 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
           ++   +GYE  +  ++ D G Q   L  +        L+ N+ ++ E   P
Sbjct: 145 AIAEKNGYESVKINHLGDWGTQFGKLITAY------KLWGNEEEVRENTIP 189



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 58/290 (20%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K+DG+  Y   DLA  K + E   F   +Y++G +   + ++L  V   + E+ A  +++
Sbjct: 300 KNDGTTLYATRDLAAAKFRKETYDFVKCLYIVGGEQQLHFQQLFQVLQIMDEEWAA-DMV 358

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGS 419
                 + +DG   KMS R G  + L  V+ E                         VG 
Sbjct: 359 HIPFGLILKDGK--KMSTRKGKVVLLEEVLQEAINKTKQNIIDKNPLLDNIDDVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKD---IFPDL 475
            +V F  L  KN  + + +F   +  + E     YVQY  AR  ++  +AK     F  L
Sbjct: 417 GAVIFHDL--KNERIGNVEFNLDQMLTFEGETGPYVQYTIARGNTLLAKAKTKQHSFKGL 474

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D DL                 ++I  L ++P VIE A  A EP  +A Y+  LA  F+  
Sbjct: 475 DGDL---------------SWEVIKLLEQFPAVIERAFTAYEPSIVAKYVIKLAQAFNSF 519

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +      ++ +Q +  + +  RL L  +V  ++  GL ++G+++P +M
Sbjct: 520 YGN------VKILQEDKHQES--RLALTQSVTIVLTEGLRLLGMQAPEKM 561


>gi|315271275|gb|ACO45989.2| putative Arginine--tRNA ligase (Arginine translase) (Arginyl-tRNA
           synthetase) [Deinococcus deserti VCD115]
          Length = 609

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKI 101
           G   T AA  +++  G +P  IA  +   +++   +  V  AG  F+N +L  + ++R +
Sbjct: 35  GDYGTPAAFQMAKSAGGNPAQIAAQLAQTVQLPTGIKRVEAAGP-FLNFFLDTAMFVRDV 93

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + +  V        +   G KV IE  S NP   +HVGH R  V+GD++A +   +G+ V
Sbjct: 94  VENPFV--------MPSLGGKVVIEHTSVNPNKELHVGHLRNVVLGDSMARIFRAAGHTV 145

Query: 162 TREYYINDAGAQINT--LALSVFWRYQQALYNNDSDLPEGY 200
             + YI+D G Q      A++ + R        D  L EGY
Sbjct: 146 EVQNYIDDTGRQAAEALFAINHYHREWDGTQKYDHWLGEGY 186



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   +G  ++RF ML  + +  +DF + +    + +    YVQYA  R  SI R+A++  
Sbjct: 443 IARRIGIGAIRFAMLKAEPTRKIDFRWEQALALNGDT-APYVQYAAVRAASILRKAQEAG 501

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            +++      + +P        +L L   +A  P V+  +     P+ +A Y  DLA+ F
Sbjct: 502 HNINGSGADWDALPD------VDLALAKMVARLPEVVAQSVRVHSPHVVAQYALDLATAF 555

Query: 533 HGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  W + ++    P    +Q+    L   RL LV  +       L++IG+E P  M
Sbjct: 556 NA-WFNAKDRQGKPATNVLQSEP-GLREARLALVGRLRRAFEETLDLIGIEVPAAM 609


>gi|255730453|ref|XP_002550151.1| arginyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240132108|gb|EER31666.1| arginyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 352

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 140/346 (40%), Gaps = 54/346 (15%)

Query: 277 IDNLARQGYVY-----EGILPPPKSKTTQK-------CDMDRKQLLFRSTMVGDDVDRPL 324
           ID  AR    Y     E  +P  K K   K        D+DR   L   T     + + L
Sbjct: 24  IDTYARLNIKYDVYSGESQVPQEKMKEATKMFEDKGLIDIDRGAKLIDLTKFNKKLGKAL 83

Query: 325 L-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS---------------GYVKRL 367
           + KSDG+  Y   D+     +YE   FD MIYV+ +                   + K L
Sbjct: 84  VEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQDLHCAQFFEILKQMGFDWAKNL 143

Query: 368 EAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR---HVVDEVGSD 420
           E V       +S +K  + V L  +++  ++ M   M K    +  +     + D +G  
Sbjct: 144 EHVNFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVMQKNEEKYAQIEDPDKIADLIGIS 202

Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +V    +  K     +F + ++   +    P  Y+QYA++R  SI R++     +L+   
Sbjct: 203 AVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQYAHSRLCSIQRKSGISIEELEHAN 260

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           F   V P         + L+  LA+YP +I+ A  + EP  +  YL++L  +    +   
Sbjct: 261 FDLLVEP-------CAVNLVRTLAQYPDIIKRAVNSLEPSTIVTYLFNLTHIVSQCYD-- 311

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + +V    + L + RL L  A   ++N+G+ ++G+     M
Sbjct: 312 -----ILWVAGQEKDLAVARLALYEATRQVVNNGMKLLGLTPVERM 352


>gi|10435519|dbj|BAB14608.1| unnamed protein product [Homo sapiens]
          Length = 578

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 129/580 (22%), Positives = 236/580 (40%), Gaps = 118/580 (20%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  V+G+ +A+L    G++V R  Y+ 
Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTVIGNFIANLKEALGHQVIRINYLG 172

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD  S         
Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227

Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           + L   + + L +    +D S++  +++     K L +  D + S + F+R      +++
Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +  L  +G + + I      K T   D+            GD      +++SDG+  Y  
Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V     
Sbjct: 325 RDLAAAVDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437
           G+   M  R GD   L  V++E+    ++ M   +   EL                  DF
Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437

Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + +         QS+ +   ++QY +AR  S+         +  F     N     
Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483

Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539
            +F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H      
Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              P          ++   RL L  AV S++ +G+ ++G+
Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572


>gi|226356003|ref|YP_002785743.1| arginyl-tRNA synthetase [Deinococcus deserti VCD115]
          Length = 633

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKI 101
           G   T AA  +++  G +P  IA  +   +++   +  V  AG  F+N +L  + ++R +
Sbjct: 59  GDYGTPAAFQMAKSAGGNPAQIAAQLAQTVQLPTGIKRVEAAGP-FLNFFLDTAMFVRDV 117

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + +  V        +   G KV IE  S NP   +HVGH R  V+GD++A +   +G+ V
Sbjct: 118 VENPFV--------MPSLGGKVVIEHTSVNPNKELHVGHLRNVVLGDSMARIFRAAGHTV 169

Query: 162 TREYYINDAGAQINT--LALSVFWRYQQALYNNDSDLPEGY 200
             + YI+D G Q      A++ + R        D  L EGY
Sbjct: 170 EVQNYIDDTGRQAAEALFAINHYHREWDGTQKYDHWLGEGY 210



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   +G  ++RF ML  + +  +DF + +    + +    YVQYA  R  SI R+A++  
Sbjct: 467 IARRIGIGAIRFAMLKAEPTRKIDFRWEQALALNGDT-APYVQYAAVRAASILRKAQEAG 525

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            +++      + +P        +L L   +A  P V+  +     P+ +A Y  DLA+ F
Sbjct: 526 HNINGSGADWDALPD------VDLALAKMVARLPEVVAQSVRVHSPHVVAQYALDLATAF 579

Query: 533 HGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  W + ++    P    +Q+    L   RL LV  +       L++IG+E P  M
Sbjct: 580 NA-WFNAKDRQGKPATNVLQSEP-GLREARLALVGRLRRAFEETLDLIGIEVPAAM 633


>gi|330467703|ref|YP_004405446.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328810674|gb|AEB44846.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 573

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 123/303 (40%), Gaps = 59/303 (19%)

Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           D    PL+  K DG + Y A DLA  + +  E   D ++YV+ +  S +   +   A   
Sbjct: 295 DGAPSPLIVRKRDGGFGYAATDLAALRQRVAELHADRLLYVVDARQSLHFTMVFDTARRA 354

Query: 375 SEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
                Q++ +       L  DG P K   RAGD + L  ++ E   D  R  ++  KN E
Sbjct: 355 GWLPPQVSAVHVAFGTVLGPDGRPFK--TRAGDTVRLVDLLTEA-VDRAR-EVVAAKNPE 410

Query: 434 LL-------------------DFDFCKVKEQSKE---------NPVFYVQYAYARCRSIF 465
           L                    D    + ++ + +         N   Y+QYA+AR RS+ 
Sbjct: 411 LTGAALHERARQVGIGAVKYADLATSRTRDHTYDPQRMLALTGNTGVYLQYAHARIRSLL 470

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +A D          P   +   +  + +E  LI+ L  +   +       EP++L  YL
Sbjct: 471 ARAGD----------PAITVDPTTTLEPAERALILDLDGFADTLTEVLAHYEPHRLCGYL 520

Query: 526 YDLASVFHGHWSHGRENPRLRF---VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           Y LA  F   + H    P LR    V++N       RL L H     +++GL+++G+ +P
Sbjct: 521 YRLAQTFTTFYEH---CPVLRAPDPVRSN-------RLALCHLTGDTLHTGLSLLGIPAP 570

Query: 583 NEM 585
             +
Sbjct: 571 THL 573



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     +  +  +R L   P  IA  +V  ++ D  V  V  AG GF+NL L+   
Sbjct: 31  RRSEHADFQADGVLAAARTLRRRPRDIAAEVVEALRADDLVAEV--AGPGFVNLDLAD-- 86

Query: 98  LRKILSSIV--VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            R +L+ +   ++    G      G    +++   N    MHVGH R  ++GD L  ++ 
Sbjct: 87  -RTLLTQLAGRLADPRLGVGTPETGITTVVDYSQPNIAKEMHVGHLRSTIIGDALVRILE 145

Query: 156 FSGYEVTREYYINDAGAQINTL 177
             G  V R  +I D G Q   L
Sbjct: 146 HLGGTVVRRNHIGDWGTQFGML 167


>gi|297810839|ref|XP_002873303.1| hypothetical protein ARALYDRAFT_349990 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319140|gb|EFH49562.1| hypothetical protein ARALYDRAFT_349990 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNI 125
           LIV+       V S  + G GFIN+ +S  ++ K + +++++GI+ +   L  K  +  +
Sbjct: 74  LIVSNFPASEMVKSCSVTGCGFINVVISSDFMAKSIENMLINGIDTWAPTLPVK--RAVV 131

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S +    +HVGH R  ++GDT+A L+ +S  +V R  ++ D G Q+  +   +F  +
Sbjct: 132 DFYSPSIAKQLHVGHLRSPIIGDTIARLLEYSKVQVVRRNHVGDWGTQLGLIIEYLFEDF 191

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                 ND+ +   Y   +Y+K   K            F E+   P+ K+ + +A++++ 
Sbjct: 192 PG--LPNDAVITIEYIEALYIKSKAK------------FDED---PVFKEKAKRALVRLQ 234

Query: 246 R 246
           R
Sbjct: 235 R 235


>gi|116250831|ref|YP_766669.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255479|emb|CAK06555.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 568

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 123/553 (22%), Positives = 214/553 (38%), Gaps = 100/553 (18%)

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           + V +AG GF+N  L+ + +    ++++               +  I+F   N    +HV
Sbjct: 70  EDVSVAGPGFVNFRLADAVVAAEATAMLADPSLAAEK--ADPMRTVIDFGGPNVAKALHV 127

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN----TLALSVFWRYQQALYNNDS 194
           GH R  V+G++L  ++   G++V  + ++ D G Q+       AL+  W+          
Sbjct: 128 GHLRSFVIGESLRRILVEIGHDVLSDIHLGDWGLQMGKLLLGAALAAGWKA--------G 179

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ------------AMM 242
           DL     P  +     +EL   Y S      +E  L + +  + +            A M
Sbjct: 180 DLTSFIDPLAFEAMTVEELGALYMSGNAACEDEALLALARILTTKLQDGDPLLTAAWARM 239

Query: 243 KI-----IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +      I D  + L+   D+   E D H    + +  ++D+L  +G   +       S+
Sbjct: 240 RAISLASISDTAEMLDAHFDLLQGESDAH----AEVAPMLDDLMARGLARQ-------SE 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                D+    L        D+V  PLL  KSDG+  Y   DLA  + +  E G   ++Y
Sbjct: 289 GALIIDVSADGL-------PDNVP-PLLLRKSDGAALYGTTDLATLRQRVREIGARQIVY 340

Query: 355 VMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
                 + ++  +  A   A   +  ++       VR   DG P K   R G   +LR +
Sbjct: 341 CTDDRQALHISSVFSAARKAGYAEGVELRHATFGTVR-GNDGRPFK--TRDGFAASLREM 397

Query: 414 VD-----------------EVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYV 454
           +D                  VG  +++F  L   RK   + D D   +  + +  P  Y+
Sbjct: 398 IDLALTKSSEKVADSQAATVVGLGALKFADLSTPRKTGYVFDIDK-MISSEGRTGP--YL 454

Query: 455 QYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           QYAYAR  SI  +A++  I P  D            S    SE  +++    YP  +  A
Sbjct: 455 QYAYARICSILDKAEEAGITPAAD----------TVSISHPSERAVLIECLWYPHSLSEA 504

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP+++A   Y +A  F   ++   + P L+    +       RL     VA +I  
Sbjct: 505 ARHLEPFEIADRAYQVADAFSRFYT---DCPVLKAEDPSG------RLATCKLVARVIGK 555

Query: 573 GLNIIGVESPNEM 585
            L ++G+ +   M
Sbjct: 556 CLELLGIGTVRRM 568


>gi|149173496|ref|ZP_01852126.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847678|gb|EDL62011.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 50/294 (17%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K DG++TY   DLA  K + E    D ++YV+ S  S + + L A       +  ++  +
Sbjct: 116 KQDGAFTYATTDLATIKYRAEELKADRVLYVVDSRQSEHFQLLFATVNEWGFQNLELQHV 175

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               V L +DG P+K   RAGD + L  ++DE                            
Sbjct: 176 SFGSV-LGKDGKPLKT--RAGDNVGLESLLDESIQRAYAIIAENDDAKPEGSELSEERRQ 232

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                +G   +++  L         FD+ K+   ++ +   Y+QYAYAR   IFR+    
Sbjct: 233 EIAEIIGLGGIKYADLKHNRDSDYMFDWDKML-ANRGDTATYMQYAYARVCGIFRKG--- 288

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             ++D      N    + + D +E  L + +  Y   +E+  I   P  L  YL++L+++
Sbjct: 289 --EIDRVTLRENQSALKLQ-DETERALALQINRYSETLESVAIEARPNYLTNYLFELSNL 345

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   ++   + P L+   A   ++   RL L    A +I+ GL+++G+ +   M
Sbjct: 346 FSTFYN---QCPVLK---AEEEQVKSSRLLLCDLTARVIDHGLSLLGIRTCERM 393


>gi|404607|gb|AAD10550.1| uncertain [Mycoplasma genitalium]
          Length = 106

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           + LY++   +++SKRAG+ IT+  ++  +  D+ R+ ML + N  ++  D      Q+  
Sbjct: 6   ITLYKNKELVRLSKRAGNVITIETMLSMISEDAARWFMLSQNNGTIIKIDLDIANLQNSA 65

Query: 449 NPVFYVQYAYARCRSIFRQA 468
           NPV+YVQYA+AR  SI R A
Sbjct: 66  NPVYYVQYAFARMNSILRIA 85


>gi|237837873|ref|XP_002368234.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965898|gb|EEB01094.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221508998|gb|EEE34567.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 861

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           ++G+GFIN  LS +YL   L  +++   SG   G   +    ++ +++ S N    +HVG
Sbjct: 72  VSGRGFINFRLSSNYLASRLVDMLLNTESGSCLGFQKVETPERIVVDYASPNICKDLHVG 131

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           H R AVVGDTLA+L+ F+G+ V R  ++ D G
Sbjct: 132 HLRSAVVGDTLANLLEFAGHRVFRHNHLGDFG 163



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 29/148 (19%)

Query: 447 KENPVFYVQYAYARCRSIFRQAK-------------DIFPDLDFDLFPRNVIPQESEFDT 493
           K N   Y+ Y+  R + I R+A              ++  D+ + L  RN + +      
Sbjct: 726 KGNTAPYILYSLVRVKGILRRAGWAAGIPSELRGKPNLLSDMVYHLH-RNDLDR------ 778

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
              QL V L  +   IE+A     P KL  YLY +  +F+  +            +A + 
Sbjct: 779 ---QLGVRLLGFAIAIEDAIQTLMPSKLTAYLYSVCLLFNAFYEE------CEVTKATDE 829

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVES 581
            L + RL LVH V  ++   L+++G+++
Sbjct: 830 GLRLTRLLLVHGVRQVLEKCLDLLGIQA 857


>gi|114608416|ref|XP_518630.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 578

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 129/580 (22%), Positives = 237/580 (40%), Gaps = 118/580 (20%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL- 221
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD     K + E  
Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227

Query: 222 --LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             L   + + L +    +D S++  +++     K L +  D + S + F+R      +++
Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +  L  +G + + I      K T   D+            GD      +++SDG+  Y  
Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V     
Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGQEKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437
           G+   M  R GD   L  V++E+    ++ M   +   EL                  DF
Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437

Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + +         QS+ +   ++QY +AR  S+         +  F     N     
Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483

Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539
            +F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H      
Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              P          ++   RL L  AV S++ +G+ ++G+
Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572


>gi|197100773|ref|NP_064716.2| probable arginyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|74744409|sp|Q5T160|SYRM_HUMAN RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|55859660|emb|CAI10899.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|56203448|emb|CAI20376.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119568969|gb|EAW48584.1| arginyl-tRNA synthetase-like, isoform CRA_a [Homo sapiens]
 gi|189055050|dbj|BAG38034.1| unnamed protein product [Homo sapiens]
          Length = 578

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 129/580 (22%), Positives = 237/580 (40%), Gaps = 118/580 (20%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL- 221
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD     K + E  
Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227

Query: 222 --LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             L   + + L +    +D S++  +++     K L +  D + S + F+R      +++
Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +  L  +G + + I      K T   D+            GD      +++SDG+  Y  
Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V     
Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437
           G+   M  R GD   L  V++E+    ++ M   +   EL                  DF
Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437

Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + +         QS+ +   ++QY +AR  S+         +  F     N     
Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483

Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539
            +F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H      
Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              P          ++   RL L  AV S++ +G+ ++G+
Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572


>gi|221488492|gb|EEE26706.1| hypothetical protein TGGT1_113470 [Toxoplasma gondii GT1]
          Length = 861

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           ++G+GFIN  LS +YL   L  +++   SG   G   +    ++ +++ S N    +HVG
Sbjct: 72  VSGRGFINFRLSTNYLASRLVDMLLNTESGSCLGFQKVETPERIVVDYASPNICKDLHVG 131

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           H R AVVGDTLA+L+ F+G+ V R  ++ D G
Sbjct: 132 HLRSAVVGDTLANLLEFAGHRVFRHNHLGDFG 163



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 29/148 (19%)

Query: 447 KENPVFYVQYAYARCRSIFRQAK-------------DIFPDLDFDLFPRNVIPQESEFDT 493
           K N   Y+ Y+  R + I R+A              ++  D+ + L  RN + +      
Sbjct: 726 KGNTAPYILYSLVRVKGILRRAGWAAGIPSELRGKPNLLSDMVYHLH-RNDLDR------ 778

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
              QL V L  +   IE+A     P KL  YLY +  +F+  +            +A + 
Sbjct: 779 ---QLGVRLLGFAIAIEDAIQTLMPSKLTAYLYSVCLLFNAFYEE------CEVTKATDE 829

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVES 581
            L + RL LVH V  ++   L+++G+++
Sbjct: 830 GLRLTRLLLVHGVRQVLEKCLDLLGIQA 857


>gi|116624961|ref|YP_827117.1| arginyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228123|gb|ABJ86832.1| arginyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 642

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + IE+PR    G ++  AA  L++ L   P  IA  +V  I     V S+ +AG G+IN+
Sbjct: 27  VSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIAAELVDEIGPIAGVASLEVAGNGYINI 86

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L     R   ++ +VSG        G G K+ +E  + NP    H+GH R A +GDT  
Sbjct: 87  RLD----RGAYAAALVSGAG--EAAAGSGGKIIVEHTNINPNKAAHIGHLRNATLGDTFV 140

Query: 152 SLMAFSGYEVTREYYINDAGAQI 174
            ++   G +V  + YI++ G Q+
Sbjct: 141 RMLRAGGKQVEVQNYIDNTGVQV 163


>gi|167043988|gb|ABZ08674.1| putative DALR anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG3K8]
          Length = 623

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 23/173 (13%)

Query: 13  NYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           N +KE   KI + +K  D++  V+E  R    G ++ N A +L++ L  +P  IA+   A
Sbjct: 8   NRVKENTSKI-INEKGYDKVDFVVEYSR-SGFGDITCNVAFLLAKNLKKNPQEIAQEFAA 65

Query: 71  RIKIDPDVDSVFIAGKGFINLYLS---------PSYLRKILSSIVVSGIEYGRNLIGKGT 121
              +  D++ V     G++N +++         P  L++           YG   IGK +
Sbjct: 66  EYILGNDLEKVEAHKSGYLNFFINNNSFNNTVLPESLKE----------NYGSIDIGKNS 115

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           K+ +E  S NP   +H+GH R   +GD ++ +++ + Y+V    Y++D+G Q+
Sbjct: 116 KLVVEHTSVNPNKALHIGHLRNVAIGDAVSRILSKANYDVKVLNYVDDSGLQV 168



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 16/180 (8%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D  +L  +   V   ++R+ ++     +++ FD      + + +   Y+QY+  R   I 
Sbjct: 460 DDASLNEIAHNVAVGTIRYELIKPDLGKIITFDI-NTSLKLEGDTCSYIQYSCVRAARIL 518

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            ++    P+ D      N     +E++T+   LI  +  +   + +A     P  +A Y 
Sbjct: 519 EKSGS-EPNFDVQFDQLN-----TEYETN---LIKQIGLFEIFVNDAAKNHSPKVIAKYC 569

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDLA  F   + H      +  ++A+  +L   R  LV +    +   L+++G+ +P  M
Sbjct: 570 YDLAVAFSSFYEH------VNVLKADTPELINARSCLVSSFKLTLEKALDLLGITAPQRM 623


>gi|304320020|ref|YP_003853663.1| arginyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298923|gb|ADM08522.1| arginyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 592

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 124/582 (21%), Positives = 225/582 (38%), Gaps = 102/582 (17%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG-IEYGRNLIG 118
           +P  I E +  R+  +P  + V +AG GF+NL  +   L +  +S+     +   +  + 
Sbjct: 57  NPRAIGEAVKRRLDDNPIFEKVELAGPGFLNLTPADGALAEAAASLSTDPHLGAWQRPVD 116

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +   + +++   N   P+HVGH R A++G++L  L    G +V  + ++ D G Q+  L 
Sbjct: 117 ERQTIILDYGGPNVAKPLHVGHLRAAIIGESLKRLFRAVGDDVLGDIHLGDWGLQMGQL- 175

Query: 179 LSVFWRYQQALYNNDSDLPEGYYP-----------GVYLKHVGKELAD---KYSSELLNF 224
           ++     Q  L   D+D   G YP            +Y +      AD   + +++    
Sbjct: 176 ITQLAEEQPDLPYFDADF-TGPYPTQSPVTVDDLAALYPRASAASKADPDRRAAAQAATM 234

Query: 225 PEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             ++  P  +    + V      +  D   L +  D++  E          I  + + L 
Sbjct: 235 DLQQGRPGYRALWAHFVDVSKAALEADYAELGVTFDLWRGEASVQ----DRIGPLTERLK 290

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR---KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            +G V E       S+     D+ R   K+ L    M+         KS+GS  Y + D+
Sbjct: 291 AKGVVTE-------SEGALVIDVAREADKKTLNPVMMI---------KSNGSVGYHSTDV 334

Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR---- 393
           A  + + E  G + ++YV+    +   +  E V  AV E+   I     E          
Sbjct: 335 ATIEERVEEFGAERIVYVVDQRQA---QHFEEVFRAV-ERAGLIEADRLEHAGFGTMNGP 390

Query: 394 DGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRF 424
           DG P K   R G  + LR ++D+                             VG  +++F
Sbjct: 391 DGRPFKT--REGGVLRLRDLIDQVVEAARRRLAEGGFSADEDSAVREDTARKVGIAALKF 448

Query: 425 MMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
             L    +    FD  + V  + K  P  Y+ Y   R RS+  +A +  PD    +    
Sbjct: 449 GDLSNPRTSDYVFDVDRFVTFEGKTGP--YLLYGVVRVRSVIAKAGE-RPDPAAPIL--- 502

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   D +E QL++ ++ Y   +E A   + P+ +  + Y LA  F   ++H     
Sbjct: 503 ------LTDEAERQLVLEMSLYGDAVEAAYRRRLPHLICDHAYRLAQAFSRFYTH----- 551

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R     +  +   RL L    A  + + L ++G++ P +M
Sbjct: 552 -CRIGDEADPAVRASRLALALLTARQLEAALTLLGIDVPEKM 592


>gi|229096711|ref|ZP_04227682.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228686917|gb|EEL40824.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 562

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 55/289 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S                +V  +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGLEQSLHFNQFFTVLKKLGYNWVDGM 357

Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           E V           +S +K ++ +LL E++    D     + ++  +      V  +VG 
Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F    
Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F L            D     ++  L ++ +VIE A    EP  ++ Y+ D+A  F+ ++
Sbjct: 473 FALK-----------DDHSWSVVKLLNKFRQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 522 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|229115688|ref|ZP_04245093.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228667830|gb|EEL23267.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 562

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 55/289 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367
           KSDG+  Y   DL    Y +  Y   FD  +YV+G + S                +V  +
Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGLEQSLHFNQFFTVLKKLGYNWVDGM 357

Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           E V           +S +K ++ +LL E++    D     + ++  +      V  +VG 
Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  + + +F     +K + +  P  YVQY +AR  SI R+    F    
Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F L            D     ++  L ++ +VIE A    EP  ++ Y+ D+A  F+ ++
Sbjct: 473 FALK-----------DDHSWSVVKLLNKFRQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      +R ++ +  K +  RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 522 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYEKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|207080008|ref|NP_001128754.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Pongo
           abelii]
 gi|75042508|sp|Q5REH3|SYRM_PONAB RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|14714568|gb|AAH10420.1| Arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|55726121|emb|CAH89834.1| hypothetical protein [Pongo abelii]
          Length = 578

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 129/580 (22%), Positives = 236/580 (40%), Gaps = 118/580 (20%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL- 221
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD     K + E  
Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227

Query: 222 --LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             L   + + L +    +D S++  +++     K L +  D + S + F+R      +++
Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +  L  +G +   I      K T   D+            GD      +++SDG+  Y  
Sbjct: 280 LKLLESKGLLLRTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V     
Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437
           G+   M  R GD   L  V++E+    ++ M   +   EL                  DF
Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437

Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + +         QS+ +   ++QY +AR  S+         +  F     N     
Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483

Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539
            +F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H      
Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              P          ++   RL L  AV S++ +G+ ++G+
Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572


>gi|270693073|ref|ZP_06222954.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316008|gb|EFA28051.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 237

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN++L+P++L   +S+  +S    G     K T V I++ S N    MHVGH R
Sbjct: 2   IAGPGFINIFLNPTWLTTEISA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLR 59

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             ++GD +   + F G+ V R  ++ D G Q   L
Sbjct: 60  STIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGML 94


>gi|123387375|ref|XP_001299401.1| DALR anticodon binding domain containing protein [Trichomonas
           vaginalis G3]
 gi|121880240|gb|EAX86471.1| DALR anticodon binding domain containing protein [Trichomonas
           vaginalis G3]
          Length = 689

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A K ++N  +  +   +I    V S G EYG + + +   V++E  SANP   +H+G+ R
Sbjct: 81  ADKIYVNFKVDRAQCFQIAYDAVTSMGNEYGSSKLPEPKTVDVEHTSANPNASLHIGNLR 140

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
             ++G  LA L+ + GY V   Y++ND GAQI   A+  + R        +   PEGY
Sbjct: 141 SVLIGAHLARLLKWVGYNVRELYFVNDLGAQIGLTAVG-YARL-------NGKFPEGY 190


>gi|225874400|ref|YP_002755859.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225794344|gb|ACO34434.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 689

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 15/153 (9%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGKGFINL 91
           +E+P +   G  +   A  L+R L   P  IAE IVA + + P     +  +AG G+IN 
Sbjct: 35  VEQPPESKFGDYALPLAFELARALRKAPRKIAEEIVAALAVHPIPGFAAFEVAGAGYINA 94

Query: 92  YLS-PSYLRKILSSIVV--SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
            L   +++R  +   +    G+ Y          + +E  S NP    HVGH R A++GD
Sbjct: 95  RLDRAAFVRDFVKRRMYWKQGLAY----------ILVEHTSINPNKAAHVGHLRNAILGD 144

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           T   L+   G+ V  + YI++ G Q+  + +++
Sbjct: 145 TFVRLLEAQGFLVGVQNYIDNTGVQVADIVVAL 177


>gi|322792442|gb|EFZ16426.1| hypothetical protein SINV_15311 [Solenopsis invicta]
          Length = 554

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 111/519 (21%), Positives = 209/519 (40%), Gaps = 110/519 (21%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            +  G  + +EF S N   P HVGH R  ++G+ +A++ +F   +V +  Y+ D G Q  
Sbjct: 97  FMNNGKNIVVEFSSPNIAKPFHVGHLRSTIIGNYVANINSFVKNKVKKINYLGDWGTQYG 156

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-GKELADKYSS------ELLNFPE-- 226
            + L     +  A    D ++       +Y  +V   +LA+  SS      ++ N  E  
Sbjct: 157 LVQLG----FDMANIGED-EMRRSPIKALYTAYVTANKLAETDSSILDRARKIFNDLENG 211

Query: 227 -----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                E+W  + K Y+V+        +LK   + + I I+ D++H       ++I     
Sbjct: 212 TVVTHEQW-KMFKQYTVE--------ELKT--VYNRIGITFDEYHWESMYSAKNI----- 255

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                 E +    K +   + + DRK +      +G++ + P++KSDGS  Y A D+A  
Sbjct: 256 -----EEIVTLMEKMQLLTRDEQDRKVV-----SLGNEKNIPIIKSDGSTLYIARDIAAA 305

Query: 342 KCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             ++E   FD M YV+ +  + +   L  +      K+ Q+     E ++  + G    M
Sbjct: 306 IDRFENNYFDCMYYVVDNTQANHFLNLLEIL-----KRMQMP--WAERLKHVKFGRLQGM 358

Query: 401 SKRAGDFITLRHVVD---------EVGSDSVRFMM-------------------LWRKNS 432
             R G+ + L  ++D         ++ S + +  +                   L RK  
Sbjct: 359 RTRRGNAVFLEDILDTARDIVKQKQIDSPTTKVCLDSNDKSSDILGISAMIVNDLKRKRQ 418

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD+    +   +  V  +QY + R  S+ R    I                 SE +
Sbjct: 419 RDYTFDWNAAFDLKGDTGV-KLQYTHCRLISLERNCGAILI---------------SECE 462

Query: 493 TSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            S LQ      L++ +A++  V+  +    EP  L  YL++L++  +  +       +L 
Sbjct: 463 PSLLQEEIVDDLVILIAKFEEVVLRSYEEIEPCILTTYLFNLSNTINKAF-------KLL 515

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V+     +   RL L H   +++  G+ ++G+    EM
Sbjct: 516 KVKDEVADVAKQRLLLFHVARNVLAQGMKLLGLIPLEEM 554


>gi|332218449|ref|XP_003258367.1| PREDICTED: LOW QUALITY PROTEIN: probable arginyl-tRNA synthetase,
           mitochondrial-like [Nomascus leucogenys]
          Length = 578

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 236/580 (40%), Gaps = 118/580 (20%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD  S         
Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227

Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           + L   + + L +    +D S++  +++     K L +  D + S + F+R     +  +
Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYREKSEEVLKL 282

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +++   +G + + I      K T   D+            GD      +++SDG+  Y  
Sbjct: 283 LES---KGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA    + ++  FD MIYV       + +++  +   +    A+     C+ V     
Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGXKKHFQQVFQMLKIMGFDWAE----RCQHVPF--- 377

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437
           G+   M  R GD   L  V++E+    ++ M   +   EL                  DF
Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437

Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + +         QS+ +   ++QY +AR  S+         +  F     N     
Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483

Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539
            +F+T+ LQ      ++ HL  +  V+  ++   +P  +  YL     LA+V H      
Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDLQPRHIVSYLLTLSHLAAVAHKTLQIK 542

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              P          ++   RL L  AV S++ +G+ ++G+
Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMRLLGI 572


>gi|260790573|ref|XP_002590316.1| hypothetical protein BRAFLDRAFT_58413 [Branchiostoma floridae]
 gi|229275508|gb|EEN46327.1| hypothetical protein BRAFLDRAFT_58413 [Branchiostoma floridae]
          Length = 496

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 136/337 (40%), Gaps = 53/337 (15%)

Query: 99  RKILSSIVVSGIEYGR--NLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           R +LS +     +YGR  +L G  KG KV +E+ S N   P H GH R  ++G+ +A L 
Sbjct: 74  RSVLSKVQEDREQYGRRSDLFGVRKGEKVVVEYSSPNIAKPFHAGHLRSTIIGNFIAKLH 133

Query: 155 AFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK--HVGK 211
              G +V R  Y+ D G Q   LA+    +  ++AL  N    P  +   VY+K     +
Sbjct: 134 HALGNKVVRINYLGDWGVQFGLLAVGFQLFGSEEALQTN----PIQHLFEVYVKVNQAAE 189

Query: 212 ELAD--KYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           E  D  + + E     E +       W    +  S++   +I     K L +Q D +  E
Sbjct: 190 ENEDIHRQAREFFRLLEHRDPTALALWTRF-RGLSIEEYSRI----YKRLGVQFDEYSGE 244

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTMVGDDVD 321
             +   D S  + +I  L   G      L     + T   D+     + F ST+      
Sbjct: 245 SMY--SDRS--QQVISQLREAG------LLQTTERGTGVVDLSEDNSMSFYSTVT----- 289

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
               +SDG+  Y   D+A    +YER  FD M YV+      + ++L        EK   
Sbjct: 290 ----RSDGTSLYITRDIAAAVDRYERFKFDRMYYVVDKSQEDHFRQL----FKTLEKMGY 341

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                C  V+    G    M  R G+ + L  +++E 
Sbjct: 342 TWADRCHHVKF---GRVQGMKTRRGEVVLLEDILNEA 375


>gi|281425987|ref|ZP_06256900.1| arginine--tRNA ligase [Prevotella oris F0302]
 gi|281399880|gb|EFB30711.1| arginine--tRNA ligase [Prevotella oris F0302]
          Length = 641

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 56/297 (18%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+SDG+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  
Sbjct: 366 LLRSDGTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKEL 425

Query: 383 VLLC-ELVRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDE 416
           V     +V L       R+G  +              K S   G F  +     ++V   
Sbjct: 426 VHFSYGMVELPNGKMKSREGTVVDADDLIAAMIDDARKTSDELGKFKDMTEEEKQNVARI 485

Query: 417 VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           VG  ++++ +L    RKN      E +DF+          N   ++QY YAR RSI R+A
Sbjct: 486 VGLGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKA 536

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +        ++     +  E+  +  E+QLI  L E+   +E A     P  +A Y Y+L
Sbjct: 537 EA------ENIAVPTTLSTEAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIANYCYEL 590

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              F+  +           + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 591 TKDFNQFYHD------YSILNADTETEKITRLMLAKNVAKVIKNGMELLGIEVPERM 641



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           + F   KGF+NL ++      +L+ I        + +      V IE+ S N   P+H+G
Sbjct: 111 AAFNVVKGFLNLTVAKEAWIGLLNDINADEKFGEKKVTDNSPLVMIEYSSPNTNKPLHLG 170

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           H R  ++G +LA +M  +G +V +   +ND G  I
Sbjct: 171 HVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHI 205


>gi|325115167|emb|CBZ50723.1| arginyl-tRNAsynthetase, related [Neospora caninum Liverpool]
          Length = 594

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 43  GHLSTNAAMILSRPLGLDPLTI------AELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           G    N+AM L +    D L +       E I   +K +P   +V  + +GF+ + ++  
Sbjct: 35  GDFQCNSAMALFKQKSKDELGVQSPKEAGEKIAEHLKGEPLFSNVQASPQGFVTVDVAGD 94

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +L + L  ++            K  +V ++F S N    MHVGH R  ++G+++  ++AF
Sbjct: 95  WLSQDLKQVLRQKGPLQLPHADKKLRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAF 154

Query: 157 SGYEVTREYYINDAGAQINTL 177
            G+EV R  +I D G Q   L
Sbjct: 155 HGHEVQRINHIGDWGTQFGML 175



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 21/152 (13%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
             + +G  +V++  L +       F + ++ +  K N   Y+ YAYAR  +IFR+A    
Sbjct: 440 AAEAIGYSAVKYFDLKQNRHTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKAGVDI 498

Query: 473 PDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLA 529
             LD         P+E + +  +E +L V LA++P V+  ATI ++   ++LA Y+Y ++
Sbjct: 499 STLD---------PEELKIEEPAERKLAVTLAQFPDVL--ATIVEDLHIHRLAEYMYKVS 547

Query: 530 SVFHGHWSH-----GR-ENPRLRFVQANNRKL 555
             F   +       GR +N RL   +A  + L
Sbjct: 548 GAFTDFYQACKVLGGRQQNTRLLLCEATRKIL 579


>gi|15807552|ref|NP_296288.1| arginyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|39932240|sp|Q9RRC4|SYR_DEIRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|6460396|gb|AAF12109.1|AE002086_1 arginyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 609

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 16/198 (8%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  ++LK  +++   ++ +    +D  + E P +   G   T AA  +++  G +P  IA
Sbjct: 2   DLKAQLKAAVEQAAHQMGMP---VDAAIQETPANKP-GDYGTPAAFQMAKAAGGNPAQIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +   + +   +  V   G  F+N +L + +++R +        +E    L  +  KV 
Sbjct: 58  AQLAQTVVLPAGIRRVEATGP-FLNFFLDAGAFVRGV--------VERPFELPKREGKVV 108

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVF 182
           IE  S NP   +HVGH R  V+GD++A ++  +G+ V  + YI+D G Q   +  A   +
Sbjct: 109 IEHTSVNPNKELHVGHLRNVVLGDSMARILRAAGHTVEVQNYIDDTGRQAAESLFATQHY 168

Query: 183 WRYQQALYNNDSDLPEGY 200
            R    +   D  L EGY
Sbjct: 169 GRVWDGVQKYDQWLGEGY 186



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +   +G  ++RF ML  + +  +DF + +    + +    YVQYA  R  +I ++A++ 
Sbjct: 442 EIARRIGLGAIRFAMLKAEPTRKIDFRWEQALALNGDT-APYVQYAAVRAANILKKAEEA 500

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D      + +P        +L L   +A+ P V   A     P+ +A Y  DLA+ 
Sbjct: 501 GYATDGTGADWDALPD------IDLVLAKQIAKLPEVAAQAARIHSPHVVAQYALDLATS 554

Query: 532 FHGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  W + +     P    +Q +   L   RL L+  +       L++IG+E P  M
Sbjct: 555 FNA-WYNAKTKQGKPATNVLQ-SEEGLREARLALIVRLRKAFEDTLDLIGIEIPAAM 609


>gi|319900803|ref|YP_004160531.1| arginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415834|gb|ADV42945.1| arginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 605

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 57/307 (18%)

Query: 315 MVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-- 370
           + G+ +D + LL++DG+  Y   D+   K ++ +   D MIYV+G++ + + + L  +  
Sbjct: 320 LTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLD 379

Query: 371 AAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDE-------- 416
                  K  ++     V L E     R+G  +       + I T +   DE        
Sbjct: 380 KLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIETAKETSDELGKLDGLT 439

Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
                     VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 440 KEEADNIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+AK+   ++   L      P   E    E  LI  +A++  V++ A     P
Sbjct: 491 ARIQSVLRKAKEAGIEIPARL------PDGIELSEKEEGLIQMIADFASVVKQAGEDYSP 544

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y YDL   ++  +           ++  N  L + RL L   VA ++  G+ ++G
Sbjct: 545 SVIANYTYDLVKEYNQFYHD------FSILREENEALKVFRLALSENVAKVVRLGMGLLG 598

Query: 579 VESPNEM 585
           +E P+ M
Sbjct: 599 IEVPDRM 605



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTK 122
           I E ++A    +P V + F   KGF+NL ++ S   ++L+ I      YG   +  K   
Sbjct: 63  IGEYLLAN---EPSV-AAFNVIKGFLNLTVASSAWIELLNGIHAES-SYGIVPVTDKSPL 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I
Sbjct: 118 VMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHI 169


>gi|297159433|gb|ADI09145.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 602

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 63/303 (20%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV---SE 376
           PL+  KSDG + Y A DL+  + + +    D+++YV+ +  S + K +   A  +   +E
Sbjct: 323 PLIVQKSDGGFGYAATDLSAIRDRIQNLQADSLVYVVDARQSLHFKMVFETARRIGWLNE 382

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           K     +    +  L +DG P K   R G+ + L  ++DE                    
Sbjct: 383 KTHAYQLAFGTV--LGKDGKPFKT--REGETVRLGDLLDEAIERATAVVREKSKGKIDLT 438

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R
Sbjct: 439 EEEIAERGAQVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILR 497

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            A +           + V   E     +E  L +HL ++  ++       EP+KLA YLY
Sbjct: 498 LAGE---------GQKPVAHPELPLAPAERALGLHLDQFAEILREVAAGYEPHKLAAYLY 548

Query: 527 DLASVFHGHWSHGRENPRLRF----VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            LAS +   +    + P L+      Q  N      RL L    A  ++ G++++G+ +P
Sbjct: 549 QLASFYTTFYD---KCPVLKAEGGPAQVEN------RLFLCDLTARTLHQGMDLLGIRTP 599

Query: 583 NEM 585
             +
Sbjct: 600 ERL 602



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N  + L++ L  +P  +A  +V  +     +  + ++G GF+N+ +S   + K L++
Sbjct: 41  FQANGMLALAKKLKGNPRELAAKVVESLPAGELIADIEVSGPGFLNITVSDEAIVKTLAA 100

Query: 105 IVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  G+ Y  +    GT V +++   N    MHVGH R AV+GD +  ++ F+G +V
Sbjct: 101 RAADARLGVPYAES---PGTTV-VDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFAGEKV 156

Query: 162 TREYYINDAGAQINTL 177
            R ++I D G Q   L
Sbjct: 157 VRRHHIGDWGTQFGML 172


>gi|322435660|ref|YP_004217872.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9]
 gi|321163387|gb|ADW69092.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9]
          Length = 674

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 19/156 (12%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID----PDVDSVFIA 84
           L ++ +E+P   A G L+   A  L++ L   P  IA  +   +  D    P V SV +A
Sbjct: 25  LTQLAVEQPPSIALGELALPVAFELAKRLRKAPRAIAMELAEALNGDLASLPGVASVEVA 84

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGR--NLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           G G++N+ L          +  V  I   R  +L G G ++ IE  S NP    H+GH R
Sbjct: 85  GAGYLNVRLD--------RAAAVQSIAADRHADLGGAGFRL-IEHTSINPNKAAHIGHLR 135

Query: 143 CAVVGDTLASLMA----FSGYEVTREYYINDAGAQI 174
            A++GDT   L+      +GY+V  + YI++ G Q+
Sbjct: 136 NAILGDTFQRLLRKDEYKTGYDVGVQNYIDNTGVQV 171


>gi|303274520|ref|XP_003056579.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226462663|gb|EEH59955.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 654

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 132/592 (22%), Positives = 219/592 (36%), Gaps = 143/592 (24%)

Query: 60  DPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           +P ++AE I+  I   P  +S F    +AG GFIN+  S  +L +    +     +    
Sbjct: 130 NPRSLAEAIIQAI---PAENSFFEKLAVAGPGFINITFSREFLAQEALRVFHCSADGTFE 186

Query: 116 LIGKGTKVNIEFVSANPTGP--------MHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
              K  K+  +    + + P        MHVGH R  ++G+T+   + F G EV R  ++
Sbjct: 187 TTRKFRKLTAKRAVVDYSSPNIAKEMQEMHVGHLRSTIIGETICRALEFVGVEVIRLNHV 246

Query: 168 NDAGAQINTL----------------ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            D G Q   L                 L   ++  +  +++D D  +     V     G 
Sbjct: 247 GDWGTQFGMLLAHLEDISESSDFEVKNLQELYKQSKIRFDSDEDFKKRARAAVVHLQAG- 305

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              DK+        +EKW  I          ++ R D + +    D+ I E    RG+  
Sbjct: 306 ---DKH-------LKEKWTDIC---------EVSRQDFEEIYRLLDVHILE----RGES- 341

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMVGDDVDRPLL--K 326
                          Y  ++P   S+  +K      D    +F      D  D PL+  K
Sbjct: 342 --------------YYNYLIPDVLSELIEKEIAVQSDGALCIF-----ADGSDSPLICRK 382

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE----KKAQI 381
           S+GS+ Y + DLA    +  +   D +IYV      G  K  +A+  A S     K+   
Sbjct: 383 SNGSFNYASTDLAALWQRISDLCADWIIYVT---DVGQKKHFDAIFDAASRAGWLKRENG 439

Query: 382 NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------------------- 419
           NV L  +   + +  DG   +   R+GD + L+ ++ E  S                   
Sbjct: 440 NVSLDHVGFGLVMGVDGK--RFRTRSGDTVPLKSLLREAQSRCLDSLRGRESTLSDDELE 497

Query: 420 DSVRFMMLWR------KNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDIF 472
           D+ R M +         N+ L ++ F   +    K N   Y+ Y +AR  S+  +A    
Sbjct: 498 DASRIMGVAAVKYADLHNNRLTNYTFSYERMLDLKGNTAVYLLYTHARISSLLERAH--- 554

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +    N +  + EF   E  L + + ++P V+E+      P +L  Y Y L   F
Sbjct: 555 -TQDLEPLSINDLVLKDEF---ERVLALTIMKFPDVVESVVQDLLPSRLCDYTYSLCVTF 610

Query: 533 HGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  +      G E  R R               L  A A  +    +I+G+E
Sbjct: 611 NEFYGSCKVLGGEQERSRTF-------------LCQATAISLRQCFHILGIE 649


>gi|328866635|gb|EGG15018.1| arginyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 570

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 194/491 (39%), Gaps = 85/491 (17%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF S N   P H GH R  ++G+ L +L    GY+VT   Y+ D G Q   LA+  F R
Sbjct: 123 LEFSSPNIAKPFHAGHLRSTIIGNFLVNLHRAVGYKVTSMNYLGDWGKQYGLLAIG-FER 181

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-LLNFPEEKWLPIVKDYSVQAMM- 242
                + ++ +L +   P  +L HV  ++  +  +E  ++     +   ++D  V A+  
Sbjct: 182 -----FGSEEELQKD--PIAHLFHVYVKINAQAETEPSIHDDARSYFKRMEDGDVDALAI 234

Query: 243 -KIIRD----DLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            K  RD      KA    LN+  DI+  E     G    +    D L  +  V E     
Sbjct: 235 WKRFRDVSIEKYKAIYARLNVSFDIYSGESLMCDG----MVHAYDKLVEKNLVIE----- 285

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             S+  +  D++  +L                K DGS  Y   D+A    + E   FD M
Sbjct: 286 --SEGAKVIDLEAYKLGKVLVK----------KKDGSTLYITRDIAAANYRKEDLKFDKM 333

Query: 353 IYVMGSDHSGYVKRLEAV-------------------AAAVSEKKAQINVLLCELVRLYR 393
           IYV+ S    + ++L  +                      +S +K  + V L +++   +
Sbjct: 334 IYVVASQQELHFRQLFKIVETMGYEWSKDLTHIGFGMVKGMSTRKGTV-VFLEDILNESK 392

Query: 394 DGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449
             M   M K    +  +     V D +   +V       K ++  DF++ ++   +    
Sbjct: 393 QIMGEVMKKNEAKYAEIEKPDEVADILAVSAVVIQDFSAKRNKDYDFNWDRMLSFEGDTG 452

Query: 450 PVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           P  Y+QYA+AR  S+ R+    I  D D  L        E E  T    L V +  Y  V
Sbjct: 453 P--YLQYAHARLCSMERKNNVAINKDADLGLLT------EPEAYT----LAVTIGRYGDV 500

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++ A    EP  +A YL++L        S       + +V+   + L   R  L H    
Sbjct: 501 LQGALNNLEPNVVATYLFELCHAISSAHS-------VLYVKDREQNLAEARTALFHCAKI 553

Query: 569 IINSGLNIIGV 579
           I+ +GL I+G+
Sbjct: 554 ILGNGLRILGL 564


>gi|85057596|ref|YP_456512.1| arginyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789701|gb|ABC65433.1| arginyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 601

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 133/570 (23%), Positives = 234/570 (41%), Gaps = 105/570 (18%)

Query: 54  SRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIE 111
           ++ +  +P  I E I  +I  I+   D +F+   GF+N+ L  + L  KIL  I      
Sbjct: 87  AKKIKTNPHIIFENIKKKIVAINEIQDLIFL--NGFLNIKLKRASLAHKILIKINKLQTN 144

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG N   +   + I++ S N      VGH R  V+G+ L ++    G++V    ++ D G
Sbjct: 145 YG-NSPNQNQTIVIDYSSPNIAKNFSVGHLRSTVIGNALKNIYQKLGFKVVGINHLGDWG 203

Query: 172 AQINTL--ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---ELADKYSSELLNFPE 226
            Q   +  A   +   ++ L +  ++L + Y   V+     K   EL ++ +   L   +
Sbjct: 204 TQFGKMIVAYQKWGNKEKTLKDPINELQKLY---VFFHQKAKTNPELNEQANFAFLQLEQ 260

Query: 227 --EKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             +K+L + K   + S+Q   KI           +DI     DF+ G+ S   D I    
Sbjct: 261 QNQKYLDLWKWFREVSLQEFCKI-----------YDILGISFDFYLGE-SFYNDKI---- 304

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLL-KSDGSYTYFAA 336
              +++E              ++++K+LL     V     D++   L+ K++GS  Y   
Sbjct: 305 --AHLFE--------------ELEQKKLLKEEDKVLLIELDNLPPGLVKKTNGSNLYLTR 348

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL  FK +Y      N++YV+G++   Y K+L  +   +     +I  +   LV +  DG
Sbjct: 349 DLTTFKYRYNTFNCQNILYVVGNEQKLYFKQLAQIIEKMGYCDTKIKHINFGLVLM--DG 406

Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRK 430
              K+S R   F TL  V+++                         +   ++ F  L  K
Sbjct: 407 K--KISTRNHKFTTLIEVINQATILAKKIIEEKNPHLSDINQNARKIAVGAIIFNDL--K 462

Query: 431 NSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           N   LD DF  +   Q K     Y+QY  AR  S+ ++ K     LD  L  + +  +  
Sbjct: 463 NDRHLDIDFNLETILQFKGQTGPYLQYTAARLNSLLKKEK-----LDISLIDKTIYQKGH 517

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
            F  ++L     L  +P +++ A     P  LA Y   +    +  +S  +       + 
Sbjct: 518 YFILAKL-----LDYFPLILQKAQKDNMPSILARYTLKITQNVNFLYSQEK-------IL 565

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +++  T   L L+ AV   +   L I+GV
Sbjct: 566 TDDKTTTNTNLLLIQAVFITLKESLRILGV 595


>gi|73544389|ref|XP_848089.1| arginyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|321438443|emb|CBZ12199.1| putative arginyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 692

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           +P+ + P  + E +   +  +  +D      KGFIN+ +   +L +++  ++  GI   R
Sbjct: 61  QPIKMSPQMVGEELKKNLVDNDIIDEFEPTSKGFINVSIRKEWLARMVKEVLKQGI---R 117

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             + K  +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G   
Sbjct: 118 PPVVKKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAF 177

Query: 175 NTLALSV 181
             L L +
Sbjct: 178 GMLVLYI 184


>gi|296242193|ref|YP_003649680.1| arginine--tRNa ligase [Thermosphaera aggregans DSM 11486]
 gi|296094777|gb|ADG90728.1| Arginine--tRNA ligase [Thermosphaera aggregans DSM 11486]
          Length = 750

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 5/99 (5%)

Query: 88  FINLYLS-----PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           F+N YL+      S +  +L   +  G +   +  G G  + +E  SANP  P+H+G  R
Sbjct: 93  FVNGYLNVTIDYSSIISNLLKEFLEDGFKKTLSSYGGGRTIVVEHTSANPVHPLHIGSGR 152

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +++GDT + L    G+ V   +Y+ND G Q+  LA  V
Sbjct: 153 NSIIGDTFSKLSKKLGFNVVTRFYVNDLGRQVAVLAYGV 191


>gi|212550359|ref|YP_002308676.1| arginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548597|dbj|BAG83265.1| arginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 592

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 113/574 (19%), Positives = 223/574 (38%), Gaps = 128/574 (22%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A KGF+NL LS +Y    L++I  +   YG + +      + IE+ S N   P+H+GH R
Sbjct: 75  AIKGFLNLTLSSTYWINSLNTIHRTK-NYGMKKITNNSPLIMIEYSSPNTNKPLHLGHIR 133

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDSDLPEGYY 201
             ++G +++ ++  +G ++ +   +ND G  I    L+  W ++      N S     + 
Sbjct: 134 NILLGYSISEILKATGNQIVKTNIVNDRGIHICKSMLA--WKKWGNGETPNSSGKKGDHL 191

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            G Y     +E    Y  E+L        P   +     M +  R+ L+           
Sbjct: 192 IGEYYVKFNQE----YKKEILTMEASGLTPKEAEEKSLLMFE-AREMLRK---------- 236

Query: 262 EDDFHRGDPSPIR--DIIDNLARQGY--VYE--GILPPPKSKTTQKCDMDRKQLL----- 310
              +  GDP  I    I +N    G+   Y+  G+        +Q     +K++L     
Sbjct: 237 ---WETGDPETIHLWKITNNWVHIGFKETYKTLGVDFDKIYYESQTYLEGKKKILEGFEK 293

Query: 311 --------------FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                           S  +G+ +   LL+SDG+  Y   D+   K +++    + MIY+
Sbjct: 294 GIFYKKEDGSIWANLASNGLGEKL---LLRSDGTSVYITQDIGTAKLRFDDYSINKMIYI 350

Query: 356 MGSDHSGYVKR----LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            G++ + + +     L+ +    S+     +  + EL     +G   KM  R G  +   
Sbjct: 351 AGNEQNYHFQALSLLLDKLGFEFSKNLIHFSYGMVEL----PEG---KMKSREGTVVDAD 403

Query: 409 --------TLRHVVDEVGS------------------DSVRFMMLW---RKN-----SEL 434
                   T + + +++G                    ++++ +L    RKN      E 
Sbjct: 404 DLIEEMIQTAKEISNKLGKLGKCTDKETNEVYKIISMGALKYFILKVDPRKNMTFNPKES 463

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEF 491
           +DF+          N   ++QY YAR +SI +++         +  ++F           
Sbjct: 464 IDFN---------GNTGPFIQYTYARIKSILKKSNIKIQCIKSISTNIF----------L 504

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E  +I  L+++P +++ A    +P  +A Y + +A  ++  + +         ++  
Sbjct: 505 NEKEKNIIQLLSDFPTIVQEAADNFDPSIIANYTFCIAKEYNQFYHN------YSILKEE 558

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N  +   RL L +  + II     ++G+  P  M
Sbjct: 559 NEDIQKFRLILSYNTSKIIKMSFKLLGINVPERM 592


>gi|329936047|ref|ZP_08285847.1| arginyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304525|gb|EGG48403.1| arginyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 587

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 50/294 (17%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSDG Y Y A DL+  + +  R   + ++YV+ +  S + K +   A        
Sbjct: 313 PLIVQKSDGGYGYAATDLSAIRDRVFRLKANTLLYVVDARQSLHFKMVFETARRAGWLGE 372

Query: 380 QINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +    L     L  DG P K   RAG+ + L  ++DE                      
Sbjct: 373 DVTAHQLAFGTVLGADGKPFKT--RAGETVRLVDLLDEAVDRAAAVVREKAQDLSEAEIA 430

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A D+
Sbjct: 431 ERGAQVGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGDV 489

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            P              E E   +E  L +H+  +   + +A     P+KL  YLY LAS+
Sbjct: 490 AP----------AAHPELELAPAERALGLHVDAFAEAVADAAAEYAPHKLTAYLYQLASL 539

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   +       +   ++A +      RL L    A  ++ G+ ++G+ +P  +
Sbjct: 540 YTTFYD------KCPVLKAESPAQVENRLLLCDVTARTLHRGMALLGIRTPERL 587



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 7/135 (5%)

Query: 47  TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
            N  + L++    +P  +A  +V+ +     +  V ++G GF+N+ ++   + + L++  
Sbjct: 43  ANGILALAKKEKANPRELATQVVSHVVTGEVIADVEVSGPGFLNVTVADGAIVRNLAARA 102

Query: 107 VSGIEYGRNLIGK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                 GR  + +    GT V +++   N    MHVGH R AV+GD++  L+ F+G  V 
Sbjct: 103 AD--PEGRLGVPRAERPGTTV-VDYAQPNVAKEMHVGHLRSAVIGDSVVQLLEFTGESVV 159

Query: 163 REYYINDAGAQINTL 177
           R ++I D G Q   L
Sbjct: 160 RRHHIGDWGTQFGML 174


>gi|299142422|ref|ZP_07035554.1| arginine--tRNA ligase [Prevotella oris C735]
 gi|298576144|gb|EFI48018.1| arginine--tRNA ligase [Prevotella oris C735]
          Length = 605

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 56/297 (18%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+SDG+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  
Sbjct: 330 LLRSDGTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKEL 389

Query: 383 VLLC-ELVRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDE 416
           V     +V L       R+G  +              K S   G F  +     ++V   
Sbjct: 390 VHFSYGMVELPNGKMKSREGTVVDADDLIAAMIDDARKTSDELGKFKDMTEEEKQNVARI 449

Query: 417 VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           VG  ++++ +L    RKN      E +DF+          N   ++QY YAR RSI R+A
Sbjct: 450 VGLGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKA 500

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           K        ++     +  ++  +  E+QLI  L E+   +E A     P  +A Y Y+L
Sbjct: 501 K------AENIAIPTTLSTDAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIANYCYEL 554

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              F+  +           + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 555 TKDFNQFYHD------YSILNADTEIEKITRLMLAKNVAKVIKNGMELLGIEVPERM 605



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           + F   KGF+NL ++      +L+ I        + +I     V IE+ S N   P+H+G
Sbjct: 75  AAFNVVKGFLNLTVAKEAWIGLLNDINADEKFGEKKVIDNSPLVMIEYSSPNTNKPLHLG 134

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           H R  ++G +LA +M  +G +V +   +ND G  I
Sbjct: 135 HVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHI 169


>gi|162447348|ref|YP_001620480.1| arginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985455|gb|ABX81104.1| arginyl-tRNA synthetase, class 1c [Acholeplasma laidlawii PG-8A]
          Length = 559

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 120/542 (22%), Positives = 211/542 (38%), Gaps = 92/542 (16%)

Query: 81  VFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           VF AG  F+N+YL    + K IL+SI      +G       T V I++ S N      VG
Sbjct: 73  VFTAG--FLNIYLKRVDVSKSILNSIHDEKQSFGTQPNNNKTIV-IDYSSPNIAKSFSVG 129

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPE 198
           H R  V+G++L  +    GY V    ++ D G Q  ++ ++   W  +  +  N  D  +
Sbjct: 130 HLRSTVIGNSLKLIYQKLGYNVVGINHLGDWGTQFGSMMVAYRMWGDKDKIKANPIDELQ 189

Query: 199 GYYPGVYLKHVGKE-LADKYSSELLNF----PE-EKWLPIVKDYSVQAMMKIIRDDLKAL 252
             Y   +      E L  K     L      PE  K     ++ S+Q  M +       L
Sbjct: 190 ALYVRFHEAAEKDESLKQKARDAFLKLEQGDPEYTKLWTYFREVSLQEFMTM----YDIL 245

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           ++  D +  E  ++      ++++ D         + +L   +     K + D   +L +
Sbjct: 246 DVSFDSYNGEAFYNDKMDRVVKELED---------KHLLVEDQGAMVVKLEDDTPPVLIK 296

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371
                        +SDG+  Y   DLA    + +   FD  +YV+G++   + + L+ V 
Sbjct: 297 -------------RSDGATLYTTRDLAALLYRNDTYHFDKALYVVGNEQKLHFENLKKVV 343

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
             +       N+       + +DG   KMS R G    L +V+++               
Sbjct: 344 KMMG---YDFNIEHINFGLVLQDGK--KMSTRKGKTTKLDYVLNQAVLKAKQAIEEKNPN 398

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRS 463
                     VG  +V F  L  KN   L+ +F     +K + +  P  Y+ Y+  R  S
Sbjct: 399 LENKDQVAKVVGIGAVIFNDL--KNDRTLNIEFDLDGMLKFEGQTGP--YLLYSIVRIFS 454

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I +        +D+ L+           D     LI  L ++P V++ A  +  P  +A 
Sbjct: 455 ILKSNTIDITQVDYTLYQ----------DEIYYSLIKVLDQFPSVVQRAAESYSPSTVAK 504

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL  L+  F+  ++  + N     V+  N       L LV ++ +I+  GL ++G++   
Sbjct: 505 YLLQLSQEFNTFYAKVKINDSNDVVRQTN-------LLLVESILNILIEGLRLLGMKHLE 557

Query: 584 EM 585
            M
Sbjct: 558 AM 559


>gi|39938941|ref|NP_950707.1| arginyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722050|dbj|BAD04540.1| arginyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 557

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 216/535 (40%), Gaps = 100/535 (18%)

Query: 87  GFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           GF+N+ L  + L  +IL  I      YG N   +   + I++ S N      VGH R  V
Sbjct: 75  GFLNIKLKRASLAYEILLKINELQANYG-NFPNQNQIIVIDYSSPNIAKNFSVGHLRSTV 133

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGV 204
           +G+ L ++    G+EV    ++ D G Q   + ++   W  ++ +  +  +  +  Y  V
Sbjct: 134 IGNALKNIYQKLGFEVVGINHLGDWGTQFGKMIVAYQKWGNKEKILKDPINELQKLY--V 191

Query: 205 YLKHVGK---ELADKYSSELLNFPE--EKWLPIVK---DYSVQAMMKIIRDDLKALNIQH 256
           +     K   EL ++ +   L   +  +K+L + K   + S+Q   KI       L I  
Sbjct: 192 FFHQQAKTNPELNEQANFAFLQLEQQNQKYLDLWKWFREVSLQEFCKI----YDILGISF 247

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D F+ E  F+    +P+ +                           ++++K+LL     V
Sbjct: 248 DFFLGE-SFYNDKIAPLFE---------------------------ELEQKKLLKEEDQV 279

Query: 317 ----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
                D++   L+ K++GS  Y   DL  FK ++      N++YV+G++   Y K+L  +
Sbjct: 280 LLIELDNLPPGLVKKTNGSTLYLTRDLTTFKYRFNTFNCQNVLYVVGNEQKLYFKQLAQI 339

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +     +I  +   LV +  DG   K+S R   F TL  V+++              
Sbjct: 340 IEKMGYCDTKIKHINFGLVLM--DGK--KISTRHHKFTTLIEVINQATILAQKIIEEKNP 395

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSI 464
                      +   ++ F  L  KN   LD DF  +   Q K     Y+QY  AR  S+
Sbjct: 396 HLSNLNQTARKIAVGAIIFNDL--KNDRHLDIDFNLETILQFKGQTGPYLQYTAARLNSL 453

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             + K     LD +L  + +  ++  F   +L     L ++P +++ A     P  LA Y
Sbjct: 454 LNKEK-----LDTNLIDKTIYQKDHYFILVKL-----LDQFPLILQKAQKDNMPSILARY 503

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +  +    +  +S  +       +  +++  T   L L+ AV   +   L I+GV
Sbjct: 504 MLKITQNVNFLYSQEK-------ILTDDKTTTNTNLLLIQAVFITLKESLRILGV 551


>gi|19112869|ref|NP_596077.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           (predicted) [Schizosaccharomyces pombe 972h-]
 gi|23822212|sp|O74781|SYRC_SCHPO RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|3738212|emb|CAA21267.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           (predicted) [Schizosaccharomyces pombe]
          Length = 618

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 42/87 (48%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS  + IL  I      YGRN  G G    IEF S N   P H GH R  ++G  LA+L
Sbjct: 114 GPSLTKLILPIIWEQRENYGRNESGSGKVAVIEFSSPNIAKPFHAGHLRSTIIGSFLANL 173

Query: 154 MAFSGYEVTREYYINDAGAQINTLALS 180
               G++V R  Y+ D G Q   LA+ 
Sbjct: 174 HESQGWKVHRVNYLGDWGKQFGLLAIG 200



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 47/281 (16%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVAAAVSEKKAQ 380
           K DG+  Y   D+     +YE+  FD  IYV+ S    Y  +L    E +    ++K   
Sbjct: 352 KRDGTTLYLTRDIGTAYKRYEKYKFDKSIYVVSSQQDMYFSQLFKIFELMGFDWAKKCVH 411

Query: 381 IN--------------VLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVR 423
           IN              V L +++ + ++ M   M K    +  + +   V D VG  ++R
Sbjct: 412 INYGLVQGMSTRKGKAVFLDDIMEVAKEEMHKVMQKNEEKYAQVENPEEVADIVGKTAIR 471

Query: 424 FMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
                 K      FD+ ++   +    P  Y+QYA++R  S+ R     + D +      
Sbjct: 472 IQDSTGKRINNYAFDWSRMTSFEGDTGP--YLQYAHSRLSSVRRNVN--YTDEEIMGANL 527

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSH 538
            ++ +   +D     L+  L +YP V++NA   QE   +  YL+ L    + ++   W  
Sbjct: 528 ELLTEPDAYD-----LVRLLGQYPDVLKNAFRFQETSTVVTYLFKLTHAVSKLYDILWVR 582

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           GRE           R + + RL L  A   ++N+G+ ++G+
Sbjct: 583 GRE-----------RDIQLARLALFGAAKQVLNNGMTLLGL 612


>gi|271970123|ref|YP_003344319.1| arginine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270513298|gb|ACZ91576.1| Arginine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 584

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 48/296 (16%)

Query: 321 DRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-- 373
           D+PL     KSDG Y Y   D+A    + +    D ++YV+G+  + ++  L A A    
Sbjct: 306 DQPLPFMIRKSDGGYGYATTDMATIHYRVQDLKVDRILYVIGATQALHMSMLFASARMAG 365

Query: 374 -----VSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLRHVVDE--- 416
                V  +  QI  +L    +++  R G  IK+         RA   +  R   D    
Sbjct: 366 WLPDHVRAEHVQIGSVLGSDGKMFKTRSGESIKLLDLLDEAETRAAAVLAGRDYDDAARA 425

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L   +     FDF ++   +  N   Y+QYA AR RSIFR+A   
Sbjct: 426 EIGHAVGMGAVKYADLSVSHDSEYVFDFDRMLALTG-NTGPYLQYATARIRSIFRKA--- 481

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                 D+ P            +E  L + +  +  +++       P+KLA YL++ ASV
Sbjct: 482 ------DVAPATATGPILLGHPAERALALQVLGFGSIVDEVAEGSMPHKLAAYLFETASV 535

Query: 532 FHGHWSHGREN-PRLR-FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +    EN P L+  V    R     RL L      ++ +GL+++GV  P  M
Sbjct: 536 FTTFY----ENCPVLKDDVDPATRA---SRLALCALTLRVLETGLDLLGVPVPERM 584



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARI-------KIDPDVDSVFIAGKGFINLYLSPSYLRK 100
           N AM LS+ L   P  +A+ I   +       + D    +V ++G GF+N+ LS  ++ +
Sbjct: 42  NVAMSLSKRLRRAPREVAQEIADHLSGRAEGTQGDAFPGTVEVSGPGFLNITLSDDWIAE 101

Query: 101 ILSSIVVSGIEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             + ++       R+ + + T    V I++ + N    MHVGH R  +VGD LA +    
Sbjct: 102 QTAEVMADP----RSGVAQATPPQTVVIDYSAPNAAKEMHVGHLRTTIVGDALARVHEHL 157

Query: 158 GYEVTREYYINDAGAQINTL 177
           G +V R+ ++ D G     L
Sbjct: 158 GNKVIRQNHLGDWGTPFGML 177


>gi|298374553|ref|ZP_06984511.1| arginine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298268921|gb|EFI10576.1| arginine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 597

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 66/305 (21%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E++   R+     +S+  G    +   
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLNEMTPE 433

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              ++   VG  S+++ +L    RKN      E +DF+          N   ++QY YAR
Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            RS+ R+A +    L   L      P        E  LI  +A+Y  +++ A     P  
Sbjct: 485 IRSVLRKAAEQGITLPEQL------PLTFAISEKEENLIQMIADYAEIVKEAGKLYSPAC 538

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A Y+YDL   ++  +    + P LR     N +L   RL L   VA I+ SG++++G+E
Sbjct: 539 VANYIYDLVKEYNQFY---HDFPILR---EENPELKNFRLVLSANVAKIVKSGMDLLGIE 592

Query: 581 SPNEM 585
            P  M
Sbjct: 593 VPERM 597



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++ S    +L+SI      YG   + + +  V IE+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +L+ +M  +G ++ +   +ND G  I
Sbjct: 140 LLGYSLSKIMKANGNQIVKTNIVNDRGIHI 169


>gi|322492952|emb|CBZ28234.1| putative arginyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 692

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 5/128 (3%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVF-IAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           +P+ + P  + E +   + +D D+  VF    KGFIN+ +   ++  ++  ++  GI   
Sbjct: 61  QPIKMSPQMVGEELKKNL-VDNDIIDVFEPTSKGFINVSIRKEWVTSMVKEVLKQGI--- 116

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R  + K  +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G  
Sbjct: 117 RPPVVKKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTA 176

Query: 174 INTLALSV 181
              L L +
Sbjct: 177 FGMLILYI 184


>gi|121716278|ref|XP_001275748.1| arginyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119403905|gb|EAW14322.1| arginyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 733

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 209/536 (38%), Gaps = 113/536 (21%)

Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   L
Sbjct: 152 KGKKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLL 211

Query: 178 A--LSVFWRYQQALYNNDSDLPEGYYPGVYLK---HVG------KEL-----ADKYSSEL 221
           A    +F   ++ L N     P  +   VY+K    VG      KEL     A K  SE 
Sbjct: 212 ANGFKLFGNEEELLKN-----PINHLFDVYVKINQIVGQQEGPIKELKEQIKAKKEKSED 266

Query: 222 LNFPEEKWLPIVK-----------------DYSVQAMMKIIRD--------DLKALNIQH 256
           ++  E +   +V                  D    A+ +  RD            LNI  
Sbjct: 267 VSELEAELAKLVDVSEDEKARRYFKSMEDGDQDALALWRRFRDLSIEKYKQTYARLNIDF 326

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++  E        S I++     A Q     G+    KS+     D  +      +  +
Sbjct: 327 DVYSGE--------SQIKNESMTAAYQSMEKAGV--SEKSEGAVIVDFTKHG----AKKL 372

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA--- 372
           G  +   +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +     
Sbjct: 373 GKAI---IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMG 429

Query: 373 -----------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH--- 412
                             +S +K  +   L +++R   D M   M K    +  + +   
Sbjct: 430 HKDLASRCQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKKNQEKYDQVENPEA 488

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471
           V D +G  SV    +  K     DF+   +   +    P  Y+QYA+AR  S+ R++   
Sbjct: 489 VADILGLTSVMVQDMTGKRINGYDFNLEAMTSFEGDTGP--YLQYAHARLCSMGRKSGLS 546

Query: 472 FPDLD---FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
             +LD    DL            +T    LI  LA +P V+ N T   EP  +  YL+ +
Sbjct: 547 VEELDSANLDLLT----------ETHATDLIRLLATWPDVLLNTTKTLEPTTIINYLFRM 596

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             +     S G ++ +   V  +  ++   R+ L  A   ++++G+ ++G+ SP E
Sbjct: 597 THIL----SSGYDSLK---VVGSEPEVKKARMALYAAARQVLHNGMRVLGL-SPVE 644


>gi|150010178|ref|YP_001304921.1| arginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166232818|sp|A6LHY5|SYR_PARD8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149938602|gb|ABR45299.1| putative arginyl-tRNA synthetase [Parabacteroides distasonis ATCC
           8503]
          Length = 597

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 72/308 (23%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E++   R+     +S+  G    +   
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 433

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              ++   VG  S+++ +L    RKN      E +DF+          N   ++QY YAR
Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484

Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            RS+ R+A +   + P+          +P        E  LI  +A+Y  +++ A     
Sbjct: 485 IRSVLRKAAEQGIVLPEQ---------LPLTFAISEKEENLIQMIADYAEIVKEAGKLYS 535

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y+YDL   ++  +           ++  N +L   RL L   VA I+ SG++++
Sbjct: 536 PACVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLL 589

Query: 578 GVESPNEM 585
           G+E P  M
Sbjct: 590 GIEVPERM 597



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++ S    +L+SI      YG   + + +  V IE+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +L+ ++  +G ++ +   +ND G  I
Sbjct: 140 LLGYSLSKIIKANGNQIVKTNIVNDRGIHI 169


>gi|256839001|ref|ZP_05544511.1| LOW QUALITY PROTEIN: arginyl-tRNA synthetase [Parabacteroides sp.
           D13]
 gi|256739920|gb|EEU53244.1| LOW QUALITY PROTEIN: arginyl-tRNA synthetase [Parabacteroides sp.
           D13]
          Length = 571

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 72/308 (23%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ +                  
Sbjct: 293 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 352

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E++   R+     +S+  G    +   
Sbjct: 353 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 407

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              ++   VG  S+++ +L    RKN      E +DF+          N   ++QY YAR
Sbjct: 408 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 458

Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            RS+ R+A +   + P+          +P        E  LI  +A+Y  +++ A     
Sbjct: 459 IRSVLRKAAEQGIVLPE---------QLPLTFAISEKEENLIQMIADYAEIVKEAGKLYS 509

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y+YDL   ++  +           ++  N +L   RL L   VA I+ SG++++
Sbjct: 510 PACVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLL 563

Query: 578 GVESPNEM 585
           G+E P  M
Sbjct: 564 GIEVPERM 571



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 47/89 (52%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ S    +L+SI          +  +   V IE+ S N   P+H+GH R  +
Sbjct: 55  KGFLNLTVACSCWIDLLNSINKQPAYGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNL 114

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G +L+ +M  +G ++ +   +ND G  I
Sbjct: 115 LGYSLSKIMKANGNQIVKTNIVNDRGIHI 143


>gi|213615487|ref|ZP_03371313.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 433

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 60/305 (19%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLE 368
           GD +   + K DG Y Y   D+A  K +YE    D ++Y + S    +       V++  
Sbjct: 153 GDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAG 212

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            V  +V  +     ++L       +DG P K   R G  + L  ++DE            
Sbjct: 213 YVPDSVPLEHHMFGMMLG------KDGKPFKT--RTGGTVKLADLLDEALERARRLVAEK 264

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          VG  +V++  L +  +    FD+  +    + N   Y+QYAY R 
Sbjct: 265 NPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRV 323

Query: 462 RSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            S+FR+A     D+D   L    VI  E      E QL   L ++   +        P+ 
Sbjct: 324 LSVFRKA-----DIDEQALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHV 374

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YLYD+A +F G + H         + A N  +   RL+L    A  +  GL+ +G+E
Sbjct: 375 MCAYLYDVAGLFSGFYEH------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIE 428

Query: 581 SPNEM 585
           +   M
Sbjct: 429 TVERM 433


>gi|327261527|ref|XP_003215581.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 579

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 122/559 (21%), Positives = 219/559 (39%), Gaps = 84/559 (15%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG--RNLIGKGT 121
           A+ +  ++K D  V  +   G G +N  ++   L K +L  +   G +YG    L     
Sbjct: 67  AQNMAKKLKCDGVVSRIG-TGDGTVNFTINRELLAKTVLQQVFDDGPQYGLKSELFSDLP 125

Query: 122 KVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           K NI  EF S N     HVGH R  ++G+ +A+L    G+ V R  Y+ D G Q   L  
Sbjct: 126 KRNIIIEFSSPNIAKKFHVGHLRSTIIGNFVANLKEACGHYVKRINYLGDWGMQFGLLGA 185

Query: 180 SVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
             F R+  ++ L +N        Y  V      +E   K + +    L   EE+ + + +
Sbjct: 186 G-FQRFGSEEKLRSNPLQHLFEVYVQVNKASEEEENTKKQAQDFFRKLEMREEQAVSLWQ 244

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + I+   K L +  D +  E D+       ++ ++D         +G+L   
Sbjct: 245 HFRNVSIEEYIQ-MYKRLGVCFDEYSGESDYQEKSQKVLK-MLDT--------KGLLKKT 294

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
           K  T           +   +  GD     +++SDG+  Y   DLA    + ++   D MI
Sbjct: 295 KEGTG----------VVHLSENGDQ-SVVIMRSDGTSLYLTRDLAAAIDRMDKYNPDTMI 343

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV   +   + +++  +   +  +  +     C+ +     G    M  R G+ + L  V
Sbjct: 344 YVTDKNQVPHFQQVFQILRLLGYEWTE----RCQHLPF---GRVQGMKTRKGEVVFLEDV 396

Query: 414 VDEVGSDSVRFMMLWRKNSEL-------------------------LDFDFCKVKE-QSK 447
           +DE  S  +    L +   EL                          D+ F   +  QS+
Sbjct: 397 LDEARSMVLERSALAKTTKELDNPLETAENIGLAALIIQDFKGLLSSDYQFSWDRVLQSR 456

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   ++QY +AR  S+         D+   +   + I      D   + LI HL  Y  
Sbjct: 457 GDTGVFLQYTHARLWSL--------EDMCGTVNQVSHINMACLQDPPAVSLIQHLLRYDE 508

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNRKLTMMRLQLVHAV 566
           ++  ++   +P  +  YL  L        SH       R  V+ +  +L   RL L  AV
Sbjct: 509 ILYQSSKDLQPKHIVNYLLKL--------SHLTAVAHKRLPVKGSVPELAESRLCLFQAV 560

Query: 567 ASIINSGLNIIGVESPNEM 585
            +++ SG+ ++G+   N+M
Sbjct: 561 RTVLGSGMKLLGITPVNKM 579


>gi|154491896|ref|ZP_02031522.1| hypothetical protein PARMER_01523 [Parabacteroides merdae ATCC
           43184]
 gi|154088137|gb|EDN87182.1| hypothetical protein PARMER_01523 [Parabacteroides merdae ATCC
           43184]
          Length = 597

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 68/306 (22%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ + + + L  +   +  +  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFI-----------TLRHV------VDE------ 416
           +  V     +    +G   KM  R G  +           T R +      VDE      
Sbjct: 379 KGLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMVGTAREISQELGKVDEMTPEEA 435

Query: 417 ------VGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                 VG  S+++ +L    RKN      E +DF+          N   ++QY YAR R
Sbjct: 436 ENIARMVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYARIR 486

Query: 463 SIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           S+ R+A +   + P+          +P  +     E  LI+ +A+Y  V+  A     P 
Sbjct: 487 SVLRKAAEQGIVLPEQ---------LPTTTTISEKEENLILMIADYASVVREAGKEYSPA 537

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y YDL   ++  +           ++  N ++   RL L   VA I+ S ++++G+
Sbjct: 538 LIANYTYDLVKEYNQFYHD------FSILREENEEVKEFRLVLSANVAKIVKSAMSLLGI 591

Query: 580 ESPNEM 585
           E P  M
Sbjct: 592 EVPERM 597



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ +++ +    GHL+      L         T  E+    ++ +P V + F   KGF+
Sbjct: 26  NQVQLQKTKKEFKGHLTLVVFPFLRMSKKSPEQTAQEIGEYLLRHEPAV-AEFNVIKGFL 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGD 148
           NL ++ +    +L+ I      YG   + + +  V IE+ S N   P+H+GH R  ++G 
Sbjct: 85  NLTIACACWIDLLNEIN-GQPSYGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNLLGY 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174
           +L+ +M  +G +V +   +ND G  I
Sbjct: 144 SLSEIMKANGNKVVKTNIVNDRGIHI 169


>gi|255012560|ref|ZP_05284686.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 597

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 72/308 (23%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E++   R+     +S+  G    +   
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 433

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              ++   VG  S+++ +L    RKN      E +DF+          N   ++QY YAR
Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484

Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            RS+ R+A +   + P+          +P        E  LI  +A+Y  +++ A     
Sbjct: 485 IRSVLRKAAEQGIVLPE---------QLPLTFAISEKEENLIQMIADYAEIVKEAGKLYS 535

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y+YDL   ++  +           ++  N +L   RL L   VA I+ SG++++
Sbjct: 536 PACVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLL 589

Query: 578 GVESPNEM 585
           G+E P  M
Sbjct: 590 GIEVPERM 597



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++ S    +L+SI      YG   + + +  V IE+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +L+ +M  +G ++ +   +ND G  I
Sbjct: 140 LLGYSLSKIMKANGNQIVKTNIVNDRGIHI 169


>gi|227827629|ref|YP_002829409.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584833|ref|YP_002843335.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227459425|gb|ACP38111.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019883|gb|ACP55290.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 625

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   I K  ++ +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G
Sbjct: 99  YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158

Query: 172 AQINTL 177
            Q+  L
Sbjct: 159 RQVAVL 164



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L++SDG+  Y   D+AY   K+ +   D +I V+  +   Y+ +++   A      ++  
Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415

Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417
               E +  Y  GM     ++MS R G  IT+  +                     +D++
Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475
            + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  ++ +      +
Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           DF           S+    +  +++ +A++P V +NA        L  +L +L+ +F+  
Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + R +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|322819381|gb|EFZ26522.1| arginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 692

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 50  AMILSR---PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           A +LS+   P+ + P+ + E +   ++ +  ++      +GFIN+ +   +   ++S ++
Sbjct: 53  AKLLSKATPPMKMSPINVGEELRKNLEENDLIERFEPTPQGFINIAIKQEWAATMVSRLL 112

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
             GI+     I    KV ++F S N    MHVGH R  ++G+T+  L  F G+EV R  +
Sbjct: 113 KMGIQPP---ILPPKKVLVDFSSPNIAKEMHVGHLRSTIIGETICRLFEFCGFEVHRVNH 169

Query: 167 INDAGAQINTLAL 179
           + D G     L L
Sbjct: 170 VGDWGTAFGMLIL 182


>gi|256394710|ref|YP_003116274.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360936|gb|ACU74433.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 619

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 53/301 (17%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA---A 372
           GD V   + KSDG Y Y A DLA  + +      D ++YV+ S  + + + +   A    
Sbjct: 340 GDPVPLMVRKSDGGYGYAATDLAAVRYRVNTLKADEILYVVDSRQALHFRMVFETARRAG 399

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
            + E    ++V    +  L  DG P K   RAG  I L  ++D                 
Sbjct: 400 YLPEGVEAVHVQFGSV--LGTDGKPFKT--RAGKTIRLIELLDSAVDHAVATVEEKNPDL 455

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      VG  +V++  L    ++   FD  ++      N   Y+QYA+AR  SI 
Sbjct: 456 AAADARTEAKLVGIGAVKYADLSTSRTKDYIFDLDRMVSLHG-NTSVYLQYAHARIHSIL 514

Query: 466 RQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R+     P  +  DL            + +E +L +HL ++   +   T   EP++LA Y
Sbjct: 515 RKLPPGTPARIHTDLV----------LEPAERKLALHLDDFGATLATVTENFEPHRLATY 564

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY LA  F   +    EN     ++A    +   R  LV      + +GL ++G+ +P++
Sbjct: 565 LYALAQTFSDFY----EN--CPVLKAPTDAVRENRAALVQLTGETLKAGLALLGISAPDQ 618

Query: 585 M 585
           +
Sbjct: 619 L 619



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           + +V +AG GF+NL L+ + L    +   +     G    G G    I++   N    MH
Sbjct: 108 IAAVDVAGPGFLNLTLTDAALAAQAAE-RLGDPRLGVAPTGVGRTAVIDYSQPNIAKEMH 166

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           VGH R  V+GD L  L+ F G  V R+ ++ D G Q   L
Sbjct: 167 VGHLRSTVIGDALVRLLEFDGRTVVRQNHLGDWGTQFGML 206


>gi|317504598|ref|ZP_07962568.1| arginine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664292|gb|EFV03989.1| arginine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 605

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 58/298 (19%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+SDG+  Y   D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  
Sbjct: 330 LLRSDGTSVYMTQDIGTADMRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKAL 389

Query: 383 VLLC-ELVRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDE 416
           V     +V L       R+G  +              K S   G F  +     ++V   
Sbjct: 390 VHFSYGMVELPNGKMKSREGTVVDADDLVAAMIDDARKTSDELGKFKDMTEEEKQNVARI 449

Query: 417 VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           VG  ++++ +L    RKN      E +DF+          N   ++QY YAR RSI R+A
Sbjct: 450 VGLGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKA 500

Query: 469 K-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + +  P       P   +  ++  +  E+QLI  L ++   +E A     P  +A Y Y+
Sbjct: 501 EAENIP------LPE-TLSTDAPLNEKEIQLIQKLNDFGAAVEQAGKDYSPSGIANYCYE 553

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   F+  +     +  +    +N  K+T  RL L   VA +I +G+ ++G+E P  M
Sbjct: 554 LTKDFNQFY----HDYSILNADSNGEKIT--RLVLAKNVAKVIKNGMELLGIEVPERM 605



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHV 138
           S F   KGF+NL +       +L+ I     ++G   +   +  V IE+ S N   P+H+
Sbjct: 75  SSFNVVKGFLNLVVGKDAWLSLLNDINADE-KFGEKKVSDDSPLVMIEYSSPNTNKPLHL 133

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           GH R  ++G +LA +M  +GY+V +   +ND G  I
Sbjct: 134 GHVRNNLLGWSLAQIMQANGYKVVKTNIVNDRGIHI 169


>gi|229582117|ref|YP_002840516.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012833|gb|ACP48594.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 625

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   I K  ++ +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G
Sbjct: 99  YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158

Query: 172 AQINTL 177
            Q+  L
Sbjct: 159 RQVAVL 164



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L++SDG+  Y   D+AY   K+ +   D +I V+  +   Y+ +++   A      ++  
Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415

Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417
               E +  Y  GM     ++MS R G  IT+  +                     +D++
Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475
            + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  ++ +      +
Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           DF           S+    +  +++ +A++P V +NA        L  +L +L+ +F+  
Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + R +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|238619786|ref|YP_002914612.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238380856|gb|ACR41944.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323474679|gb|ADX85285.1| arginyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477413|gb|ADX82651.1| arginyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 625

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   I K  ++ +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G
Sbjct: 99  YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158

Query: 172 AQINTL 177
            Q+  L
Sbjct: 159 RQVAVL 164



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L++SDG+  Y   D+AY   K+ +   D +I V+  +   Y+ +++   A      ++  
Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415

Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417
               E +  Y  GM     ++MS R G  IT+  +                     +D++
Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475
            + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  ++ +      +
Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           DF           S+    +  +++ +A++P V +NA        L  +L +L+ +F+  
Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + R +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|188994229|ref|YP_001928481.1| arginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691463|sp|B2RHN9|SYR_PORG3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188593909|dbj|BAG32884.1| arginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 597

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 119/300 (39%), Gaps = 56/300 (18%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K ++ +   + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKMRFNDYPINRMIYVVGNEQNYHFQVLSILLDRLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
                   G V+  E    +        + L+ E++R   +           D    R V
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMDEMIRTAAEIAAEAGKAAEKDEEESREV 438

Query: 414 VDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
              VG  S+++ +L    RKN      E +DF+          N   +VQY YAR RS+ 
Sbjct: 439 ARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGSFVQYTYARIRSLM 489

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A+    D+   L      P +      E  LI  ++EY  V+  A  +  P  +A Y+
Sbjct: 490 RRAEAAGYDIPSQL------PTDLPLSEKEEALIQKVSEYAEVVSEAGRSYSPALIANYI 543

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDL   ++  +           ++  + ++   RL L   VA  +  G  ++G+E P  M
Sbjct: 544 YDLVKEYNQFYHD------FSVLKEEDERIRAFRLALSEVVALTMRKGFALLGIEMPERM 597



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P    ++L+ I    I +G  +  + +  V +E+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTIAPRVWLELLNEIRAD-INFGHKVATEDSPLVMVEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +L+ +M  +GY V +   +ND G  I
Sbjct: 140 LLGYSLSEIMKANGYRVVKTNIVNDRGIHI 169


>gi|15897753|ref|NP_342358.1| arginyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|227830317|ref|YP_002832097.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579142|ref|YP_002837540.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284997739|ref|YP_003419506.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|23822202|sp|Q97ZN1|SYR_SULSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13814038|gb|AAK41148.1| Arginyl-tRNA synthetase (argS) [Sulfolobus solfataricus P2]
 gi|227456765|gb|ACP35452.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228009856|gb|ACP45618.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284445634|gb|ADB87136.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 625

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   I K  ++ +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G
Sbjct: 99  YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158

Query: 172 AQINTL 177
            Q+  L
Sbjct: 159 RQVAVL 164



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L++SDG+  Y   D+AY   K+ +   D +I V+  +   Y+ +++   A      ++  
Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415

Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417
               E +  Y  GM     ++MS R G  IT+  +                     +D++
Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475
            + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  ++ +      +
Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           DF           S+    +  +++ +A++P V +NA        L  +L +L+ +F+  
Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + R +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|71668488|ref|XP_821124.1| arginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70886493|gb|EAN99273.1| arginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 692

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)

Query: 50  AMILSR---PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           A +LS+   P+ + P+ + E +   ++ +  ++      +GFIN+ +   +   ++S ++
Sbjct: 53  AKLLSKATPPMKMSPINVGEELRKNLEENDLIERFEPTPQGFINIAIKQEWAATMVSRLL 112

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
             GI+     I    KV ++F S N    MHVGH R  ++G+T+  L  F G+EV R  +
Sbjct: 113 KMGIQPP---IIPPKKVLVDFSSPNIAKEMHVGHLRSTIIGETICRLFEFCGFEVHRINH 169

Query: 167 INDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           + D G     L L +  ++   L    + +DL + Y             A K   E   F
Sbjct: 170 VGDWGTAFGMLILYLKRQHPNFLTEMPDITDLTKFYRE-----------AKKCFDEDPKF 218

Query: 225 PEEKWLPIVK-----DYSVQAMMKIIRD 247
            EE  L +VK     + S+QA  KII D
Sbjct: 219 KEEARLQVVKLQALENESIQA-WKIICD 245


>gi|225010550|ref|ZP_03701021.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005379|gb|EEG43330.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 595

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP----QESEFDTSELQLIVHLAEYPRV 508
           ++QY YAR +SI R+A       DFD    +V+P    QES     E+ L+  L  +P  
Sbjct: 475 FMQYTYARIQSILRKA-------DFD---TSVVPDFERQESFLHEKEVALLKQLFLFPET 524

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+ A     P  +A Y YDL   F+  + +      +  +  +N +L + R+ L   VA 
Sbjct: 525 IQLAAHNYSPALVANYTYDLVKAFNSFYQN------VSILGESNEELKVFRVGLSRKVAQ 578

Query: 569 IINSGLNIIGVESPNEM 585
           +I   L ++G+E P  M
Sbjct: 579 VIQDALGLLGIEVPERM 595


>gi|221632568|ref|YP_002521789.1| arginyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156547|gb|ACM05674.1| arginyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 716

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 60/360 (16%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L++  D++  E +        +R++++    +  + +G+   P  K  +K  ++++   +
Sbjct: 391 LDVHFDVWFFESEVEEEGRQIVRELLERGIAE--ISDGL---PVVKIDEKLGLEKE--TY 443

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
           R+         P+L+SDG+  Y   DLA  K K+E+   D  I+V+    + Y++++  V
Sbjct: 444 RTL--------PILRSDGTTLYSTKDLALTKRKFEQYHVDRAIWVVDVRQTLYLQQIFKV 495

Query: 371 AAAVS-EKKAQINVLLCELVRLYRDGMPIKMS-------------KRAGDFITLRH---- 412
                 ++ A+   L  E V L    M  ++              +RA + I  ++    
Sbjct: 496 MELWGFQQAAKCYHLAYETVMLPSGAMSSRLGNVVLYEDVARQVLERALEIIEEKNPTLP 555

Query: 413 ------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465
                 V  +VG  S+++ ML R N+ ++ FD  +    +    P  Y+QYA+AR   I 
Sbjct: 556 PEVKASVARQVGLGSLKYGMLSRDNNRVIVFDIEEALSFEGHAAP--YIQYAHARACRIL 613

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +  D  P+  + L               E+ LI  +A +P  ++ A    +P  +A Y+
Sbjct: 614 EKV-DTLPEGPYAL---------DALTREEIDLIEQIALFPDEVQRAADEYKPLVIANYV 663

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA  F+  +   R  P L+  +         RL +V A    + +GL ++G+ +P  M
Sbjct: 664 YELAKRFNEFY---RVCPVLQAPEPQR----SARLAIVAAARQTLANGLQLLGIAAPEVM 716



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 23/150 (15%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           KK   R+V ER R+ A   ++   A  LSR  G           AR++          A 
Sbjct: 66  KKEAKRLVQERVRERAQA-IAEELARRLSRHTGF----------ARVE----------AI 104

Query: 86  KGFINL-YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
            G++N+ Y S  +   +L +++  G E+GR    +G +V +E+   N     HVGH R  
Sbjct: 105 NGYLNIVYDSNRFANDVLRTVLAEGSEFGRGE-ARGERVMVEYSQPNTHKAFHVGHLRNV 163

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
            +G+ L+ ++ F+G++V    YI D G  +
Sbjct: 164 CLGNALSRVLRFAGFDVLEANYIGDIGLHV 193


>gi|284175555|ref|ZP_06389524.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261602455|gb|ACX92058.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 625

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           ++ + IAG  ++N  L+P   R +  SI      +YG   + K  ++ +E  SANP  P+
Sbjct: 68  IEKIEIAGI-YLNAKLNP---RNLFVSIFSKLDDDYGLEKVEKPKRIVVEHTSANPIHPL 123

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           H+GH R  ++GD LA  +   G+ V   +Y+ND G Q+  L
Sbjct: 124 HIGHLRNMILGDALARALRARGHSVNVRFYVNDTGRQVAVL 164



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 130/294 (44%), Gaps = 60/294 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L++SDG+  Y   D+AY   K+ +   D +I V+  +   Y+ +++   A        + 
Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADLVINVIAEEQ--YIPQIQLRGA--------LE 409

Query: 383 VL----LCELVRLYRDGM----PIKMSKRAGDFITLRHV--------------------- 413
           +L      E +  Y  GM     ++MS R G  IT+  +                     
Sbjct: 410 ILGYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDSIVRNKLKEKGGNMEN 469

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++++ + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  ++ +   
Sbjct: 470 INDISNAALRYTILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTESLS 528

Query: 474 --DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
              +DF+           +    + ++++ +A++P V +N         L  +L +L+ V
Sbjct: 529 IDKVDFN-----------DLVGDKRKILLLIAKFPEVFKNTVDNLRLEDLVAFLRELSDV 577

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  +       + R +Q  +    M++L +V  V+ ++ +GL ++G+ S   M
Sbjct: 578 FNSWYD------KERVLQEQDPGKRMLKLYIVKGVSVVLKNGLGVLGIRSLERM 625


>gi|269986149|gb|EEZ92462.1| Arginine--tRNA ligase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 589

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 45/302 (14%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK---ILSSIVVSGIEYGR 114
           G DP  IAE I   I     V  V +A  G++N+ L+   L K   ILS I +      +
Sbjct: 38  GKDPSVIAEGIAKGI-TSKYVKKV-VALNGYVNINLNFEELEKQEAILSKIELKNT---K 92

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           NL   G  + +E  S NP   +H+GH R + +G+ L   + +S   V    +I D GAQ+
Sbjct: 93  NLFS-GKIIRLEHTSVNPNKALHIGHMRNSYIGEFLRKSLVYSSANVITSNFIEDTGAQV 151

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLPI 232
             + +   +  ++   N   DL        Y   + KE+ + Y ++  LL   +E  L I
Sbjct: 152 ADIIVGFKYMNKKIETNEKFDL--------YCSKIYKEVNESYENDESLLEKRKEVLLKI 203

Query: 233 VK---------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                      DY V  ++      L   NI++++     D  R            + ++
Sbjct: 204 EHGDKETLEFLDYIVNKVLLAQLSTLIGENIKYNLL----DLER-----------YILKE 248

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
           G V   +      K  +  + ++ +    + + G++V   L +SDG+  Y A D+AY   
Sbjct: 249 GIVKAALDKLMSEKIAKISENEKNKGCIVTDVGGNEV--TLTRSDGTSLYIAKDIAYAMI 306

Query: 344 KY 345
           K+
Sbjct: 307 KH 308



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 20/143 (13%)

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           V  + S+ +R+ +L    S+++ FD         ++ V YV Y+Y+R  SI ++A     
Sbjct: 441 VSTLASNVIRYYILRFSPSKMVIFDINDATSLKGDSAV-YVNYSYSRALSILKKANK--- 496

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             DF +           FD +E + I  +  +  +++NA    +P  +  YL+ ++  F+
Sbjct: 497 -KDFKVVS---------FDEAENKFIREIIFWDEILDNAVSNLKPNLVCEYLHRISDAFN 546

Query: 534 GHWSHG------RENPRLRFVQA 550
             +         RE  RL  V A
Sbjct: 547 AFYEKNRIIGDEREESRLLIVTA 569


>gi|71754737|ref|XP_828283.1| arginyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70833669|gb|EAN79171.1| arginyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 692

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 26/209 (12%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           S P+   P  + E +   ++ +  ++S     +GFIN+ + P ++   +  ++  GI   
Sbjct: 60  SPPIKTSPALVGEELKKNLEENDMIESFEPTPQGFINITIKPMWVAGTVGKVLREGIR-P 118

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            NL  +  KV ++F S N    MHVGH R  ++G+ +  L  F  YEV R  +I D G  
Sbjct: 119 PNLPKQ--KVLVDFSSPNIAKEMHVGHLRSTIIGEAICRLFEFCQYEVHRINHIGDWGTA 176

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L L  F R +   +     N SDL   Y             A K   E   F E+  
Sbjct: 177 FGMLIL--FLRRKHPNFTEEVPNISDLTTFYRE-----------AKKCFDEDAEFKEQAR 223

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           L +VK   +QA+ +   + +KA  I  DI
Sbjct: 224 LQVVK---LQALEE---ESMKAWKIICDI 246


>gi|261334106|emb|CBH17100.1| arginyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 692

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 26/209 (12%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           S P+   P  + E +   ++ +  ++S     +GFIN+ + P ++   +  ++  GI   
Sbjct: 60  SPPIKTSPALVGEELKKNLEENDMIESFEPTPQGFINITIKPMWVAGTVGKVLREGIR-P 118

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            NL  +  KV ++F S N    MHVGH R  ++G+ +  L  F  YEV R  +I D G  
Sbjct: 119 PNLPKQ--KVLVDFSSPNIAKEMHVGHLRSTIIGEAICRLFEFCQYEVHRINHIGDWGTA 176

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L L  F R +   +     N SDL   Y             A K   E   F E+  
Sbjct: 177 FGMLIL--FLRRKHPNFTEEVPNISDLTTFYRE-----------AKKCFDEDAEFKEQAR 223

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           L +VK   +QA+ +   + +KA  I  DI
Sbjct: 224 LQVVK---LQALEE---ESMKAWKIICDI 246


>gi|320162608|gb|EFW39507.1| arginyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 618

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 133/616 (21%), Positives = 233/616 (37%), Gaps = 139/616 (22%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-----PSYLRKILSSIVVS 108
           S+   +D LT  +L  ARI+ +    S  I     +   +      P++ + +L S +  
Sbjct: 48  SQSPAVDKLTGGQL-AARIQNELQTSSQAITSVATLGQLIQFGFHRPTFTKDVLHSALTQ 106

Query: 109 GIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           G +YG    IG G    ++F S N   P H GH R A++G+ L +L+   GY+     Y+
Sbjct: 107 GSKYGEARSIGAGKTAVLDFSSPNIAKPFHAGHLRSAIIGNVLRNLLQAVGYKTVAINYL 166

Query: 168 NDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
            D G Q   L +  F +Y  Q+ L ++    P  +   VY+K              +N  
Sbjct: 167 GDWGKQYGLLGVG-FAKYGSQEKLASS----PLQHLAEVYVK--------------IN-R 206

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKA---------------------LNIQHDIFISEDD 264
           E +  P + D + Q   K+   D +                      LN+Q D++  E  
Sbjct: 207 EAETDPAIHDQARQHFRKMETGDPETLATWRQFKSLSEVEYRSMYARLNVQFDVYDGESL 266

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD--- 321
            H      +  ++D L   G      +   +S TT    ++   +  +    G  V    
Sbjct: 267 QHELVQQHVASLVDKL---GVKTASEIAASQSDTTTNQALESPPVTLKREDNGALVALFA 323

Query: 322 ----RP--LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374
               +P  L K++ S TY   D+A    ++++   D  +YV+G + + + ++L  +   +
Sbjct: 324 NPQLKPTVLAKANESSTYLTRDIAAAVSRWQKYKPDLALYVVGPEQALHFEQLFELLRVL 383

Query: 375 --SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------EVGSDS--VR 423
             SE  A      C  V     G    MS R G+ + L  V++       E+G +    R
Sbjct: 384 GYSEYAAA-----CRHVAF---GKVEGMSSRTGNMVLLSDVLEEGEQHMREIGEERGLAR 435

Query: 424 FMMLWRKNSELLD-------------------------------------FDFCKVKEQS 446
                  ++E  D                                     FD+ +V  Q+
Sbjct: 436 SERTATSSAESTDDASAADQLVDRARVSRSTALAAIVVQDLKSRRLRGYKFDWNQVL-QT 494

Query: 447 KENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 Y+ Y +AR  S+ R+  +  +  D+D+ L            + S + ++  +A 
Sbjct: 495 TGTTGPYLLYTHARLCSLKRKMGSNAVAADVDWSLLS----------EPSAMYIVDVVAA 544

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP  I  A    EP  L   L DLA       S G  + R   V+  + ++   RL L  
Sbjct: 545 YPDAIVRAATQLEPSLLVDQLMDLALAV----SAGLRDLR---VKGASEEVARARLALFE 597

Query: 565 AVASIINSGLNIIGVE 580
           +    + +GL ++G++
Sbjct: 598 SARINLANGLCLLGLD 613


>gi|310641644|ref|YP_003946402.1| arginyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
 gi|309246594|gb|ADO56161.1| Arginyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
          Length = 574

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 124/556 (22%), Positives = 218/556 (39%), Gaps = 107/556 (19%)

Query: 84  AGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           A   ++N+ L  S ++  +L+ +  S  E+ +   G G +V I+  S N   P  +GH R
Sbjct: 72  ASGAYVNITLDRSVHIPPMLAEL--SKAEFLKPNTGYGQRVVIDMSSPNIAKPFGIGHLR 129

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYY 201
             V+G  L  ++  +GY      ++ D G Q    +A    W  ++ L ++    P G  
Sbjct: 130 STVIGAALYRILGETGYVPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHD----PIGES 185

Query: 202 PGVYLK-HVGKELADKYSSELLNF----------PEEKWLPIVKDYSVQAMMKIIRDDLK 250
             +Y++ H   E       E   +           ++ W     ++ V+  +       +
Sbjct: 186 LKLYVRFHQEAEHDPSLEEEGREWFRRLEQGDTEAQQLW-----EFFVEVSLSEFDRMYQ 240

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            LNI  D  + E  ++      ++ ++  L  +G + E       S       ++ +QL 
Sbjct: 241 RLNISFDHVLGESFYN----DKMQAVVAQLRAKGLLEE-------SDGALVVRLEDEQL- 288

Query: 311 FRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRL 367
                       P L  K DG+  Y   DLA    ++E    D ++YV+G +   + +++
Sbjct: 289 -----------PPCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQV 337

Query: 368 EAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
            AV     E  A+     CE V   L R     KMS R G  + L  V+DE         
Sbjct: 338 FAVLKHAGEIWAE----QCEHVPFGLMRFAGK-KMSTRRGKVVKLEEVLDEAVARAQAII 392

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYA 459
                           VG  ++ F  L  KN+ L + DF   +  + E     YVQY +A
Sbjct: 393 TEKNPNLLEQQAIAEDVGIGAIIFGDL--KNNRLNEVDFSLEEALTFEGETGPYVQYTHA 450

Query: 460 RCRSIFRQAK---DIFPDLDFDLFPR-------NVIPQESEFDTSELQLIVHLAEYPRVI 509
           R RS+  +A+   D+  +   ++  +       N++  E   D     L+  L  Y   +
Sbjct: 451 RIRSLLEKARARSDVDSNSSDNVLAQDGHSPDLNIVSDEMLGDAG-WALLKQLDRYHGQL 509

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +  D A  F+  ++      + R V          R+QL    A +
Sbjct: 510 IRAARQLEPSVIARFALDTAQAFNRFYA------KERIVDGGQ-----WRIQLAEQTADM 558

Query: 570 INSGLNIIGVESPNEM 585
           + S L ++G+++PN M
Sbjct: 559 LASTLRLLGLKAPNRM 574


>gi|290977172|ref|XP_002671312.1| predicted protein [Naegleria gruberi]
 gi|284084880|gb|EFC38568.1| predicted protein [Naegleria gruberi]
          Length = 517

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 215/523 (41%), Gaps = 110/523 (21%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           M L   L   P+ +A+ +   I  + + V+ + I   G I+L L   Y+++ +S I    
Sbjct: 1   MQLGNQLKQSPIDVAKSLGESILNNSEIVEKIDIINNGVISLSLCDEYVKRKISEIFNQQ 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG-YEVTREYYIN 168
               ++ I    +V ++F S N    MHVGH R  ++GD +  ++ + G +EV R  ++ 
Sbjct: 61  PLNVKDKI----RVIVDFSSPNMAKRMHVGHLRSTIIGDCICRILEYDGRFEVERINHVG 116

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPE 226
           D G Q   L L+   R       N  DL   +   P   L+ V K   D  S +L +   
Sbjct: 117 DFGTQFGML-LAFIER-------NSIDLEKLQTQNPPEQLETVEKYYKD--SKKLFDSD- 165

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGY 285
               P+ KD + Q ++ + + + +++   H I+    +  R +   I + +D  L  +G 
Sbjct: 166 ----PLFKDLAHQKVIALQQGNDESI---HKIWKYLLECSRYEFDSIYERLDVRLVEKGE 218

Query: 286 VY---------EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYF 334
            Y         E + P  +     KC    K+   + T+  D  + PL+  K+DG YTY 
Sbjct: 219 SYYRDFIPKTLEILNPLIQESNGAKCIFTEKE---QETITEDQKEPPLMVQKADGGYTYD 275

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---------------------A 371
             DLA  +++    +G   +IYV     + +  ++  V                     A
Sbjct: 276 TTDLATLWYRLFVSKG-KWLIYVTDFGQASHFNKVFKVGEMMKWIDPLENSRDLVWSENA 334

Query: 372 AAVSEKKAQIN-----VLLCELVRLY--RDGMPIKMS-------KRAGDFITLRH----- 412
            +++  K +I+     V+L E  + +  R G  +K+        KR+ + I L++     
Sbjct: 335 TSLTSSKVRIDHVGFGVVLDEEKKKFRTRSGDTVKLHDLLDEAIKRSYEIIKLKNDERCK 394

Query: 413 -------VVDE--------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                  + DE        VG  +V++  L    +    F F K+ +  + N   Y+ YA
Sbjct: 395 ENEEISSLTDEQIMAASKIVGYGAVKYADLRTNRTTNYTFSFDKMLD-FRGNTAVYLLYA 453

Query: 458 YARCRSIFRQA---------KDIFPDLDFDLFPRNVIPQESEF 491
           YAR  SI  ++         KD     D  LF  N+   ESE+
Sbjct: 454 YARISSIIEKSGERELMKEYKDQVAKGDLSLFT-NLKQSESEW 495


>gi|330886170|gb|EGH20071.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 142

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +E  RD  HG  ++N AM+L++P G+ P  +AE ++A +  D  V  V IAG GF+N 
Sbjct: 30  IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           + + +          ++         G   +V ++  + N    MHVGH R  +
Sbjct: 90  FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTI 142


>gi|19354292|gb|AAH24878.1| Arginyl-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 578

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 128/564 (22%), Positives = 221/564 (39%), Gaps = 105/564 (18%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG------RNLI 117
           A  +  ++K D  V ++  AG   +N  ++   L K +L  +   G +YG       +L 
Sbjct: 65  ARRLAEKLKCDTVVTAI-SAGPRTLNFKINRELLTKAVLQQVTEDGCKYGLKSELFSDLP 123

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K  ++ +EF S N     HVGH R  ++G+ +A+L    G++VTR  YI D G Q   L
Sbjct: 124 KK--RIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGLL 181

Query: 178 ALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEK 228
                 + Y++ L  N    P  +   VY++ V KE  D     K + E    L   + +
Sbjct: 182 GTGFQLFGYEEKLQTN----PLQHLFDVYVQ-VNKEATDDKNVTKLAHEFFHRLEMGDTQ 236

Query: 229 WLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
            L +    +D S++   +I     K L I  D + S + F+R     +  ++D+      
Sbjct: 237 ALSLWQRFRDLSIEEYTQI----YKRLGIYFDEY-SGESFYREKSQDVLKLLDSKGLLQK 291

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
             EG +    S T                  G      +++SDG+  Y   DLA    + 
Sbjct: 292 TAEGNVVVDLSGTG-----------------GLSSVCTVMRSDGTSLYATRDLAAAIHRM 334

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           ++  FD MIYV       + +++  +   +    A+     C+ V     G+   M  R 
Sbjct: 335 DKYNFDTMIYVADKGQRRHFQQVFQMLKIMGYDWAE----RCQHVPF---GIVKGMKTRR 387

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSE-------------------------LLDFDF 439
           G    L  V++EV S  ++ M   +   +                         L D+ F
Sbjct: 388 GGVTFLEDVLNEVQSRMLQNMASIKTTKQLENPQETAERVGLAAVIIQDFRGTLLSDYQF 447

Query: 440 CKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
              +  QS+ +   ++QY +AR  S+       +      L   NV   +     S LQ 
Sbjct: 448 SWDRVFQSRGDTGVFLQYTHARLCSLEETFGCGY------LNDSNVACLQEPQSVSILQ- 500

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKL 555
             HL  +  V+  ++   +P  +  YL     LA+V H              V+ +   +
Sbjct: 501 --HLLRFDEVLYLSSQDLQPKHIVSYLLTLSHLAAVAHKTLK----------VKDSPPDV 548

Query: 556 TMMRLQLVHAVASIINSGLNIIGV 579
              RL L  AV S++ +G+ ++G+
Sbjct: 549 AGARLHLFKAVRSVLANGMKLLGI 572


>gi|262382533|ref|ZP_06075670.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301308226|ref|ZP_07214180.1| arginine--tRNA ligase [Bacteroides sp. 20_3]
 gi|262295411|gb|EEY83342.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300833696|gb|EFK64312.1| arginine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 597

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 125/305 (40%), Gaps = 66/305 (21%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E++   R+     +S+  G    +   
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 433

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              ++   VG  S+++ +L    RKN      E +DF+          N   ++QY YAR
Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            RS+ R+A +    L   L      P        E  LI  +A+Y  +++ A     P  
Sbjct: 485 IRSVLRKAAEQGIALPEQL------PLTFAISEKEENLIQMIADYAEIVKEAGKLYSPAC 538

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A Y+YDL   ++  +           ++  N +L   RL L   VA I+ SG++++G+E
Sbjct: 539 VANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLLGIE 592

Query: 581 SPNEM 585
            P  M
Sbjct: 593 VPERM 597



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++ S    +L+SI      YG   + + +  V IE+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +L+ +M  +G ++ +   +ND G  I
Sbjct: 140 LLGYSLSKIMKANGNQIVKTNIVNDRGIHI 169


>gi|168334916|ref|ZP_02693036.1| arginyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 565

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 122/537 (22%), Positives = 214/537 (39%), Gaps = 87/537 (16%)

Query: 87  GFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            +IN Y+  + + + +L  ++     YG         + I++ S N   P H+GH R  V
Sbjct: 78  AYINFYVDKTVVVQAVLDKVLAEKDGYGFAAKKDKGNIVIDYSSPNIAKPFHIGHLRSTV 137

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G++L  +    GY      ++ D G Q   L ++    Y++  Y+   D+ +    G+ 
Sbjct: 138 IGNSLYRIFEALGYNCIGINHLGDWGTQFGKLIVA----YEK--YSTKEDVEQ---KGI- 187

Query: 206 LKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISED 263
                +EL   Y    + F +E K  P ++D + +   K+ + D  AL +      IS  
Sbjct: 188 -----QELLRIY----VKFHDEAKSDPSLEDLARENFTKMEQGDANALALWRWFKEISLK 238

Query: 264 DFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDD 319
           +F R     + DI  D+L  + +  + +    K       ++D K+L   S    ++  D
Sbjct: 239 EFER--VYKMLDISFDSLNGEAFYNDKMDRVIK-------ELDDKKLTKISEGAKIIELD 289

Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDH----SGYVKRLEAV 370
              P L  K DGS  Y   D+    Y K  Y+  F   IYV         S + K +E +
Sbjct: 290 NMSPCLITKKDGSSLYATRDITAALYRKETYD--FKKCIYVTALAQNLHFSQFFKVIEKM 347

Query: 371 AAAVSEKKAQI-----------------NVLLCE--LVRLYRDGMPIKMSKRAGDFITLR 411
             A S     +                 NVLL E  L    +    I + ++  +     
Sbjct: 348 GYAWSVDLVHVPFGMVSMETGSLSTRSGNVLLLEEILAEAVKKTKEI-IEEKNPNLENKE 406

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V  +VG  ++ F  ++    + + F + KV     E    YVQY YAR  S+ R++   
Sbjct: 407 EVAQDVGIGAIIFDDMYNTIIKDIQFSWEKVLNFDGETGP-YVQYTYARANSVLRKSGMA 465

Query: 472 FPDLD---FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
             D++    DL            D   + L+  +  +  +I  A    EP  +A Y  +L
Sbjct: 466 ISDIENICVDLI----------IDEQSVALVKQIGAFNSMITEAAEKYEPSVIARYAVNL 515

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+  +           +  ++ KL   RL LV +    I + L ++G+++P +M
Sbjct: 516 AKCFNKFYHDNS-------ILVDDMKLKKARLALVVSTMYTIKNALWLLGIKAPKQM 565


>gi|239612563|gb|EEQ89550.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 634

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 135/618 (21%), Positives = 242/618 (39%), Gaps = 124/618 (20%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90
           I+R +  AHG +    A +  +   +D + +   ++L    +  +P    VFI       
Sbjct: 61  IQRTQVLAHGDVMVVVARLRLKGANVDQVALDLSSKLCGISLISNPVPKGVFIP------ 114

Query: 91  LYLSPSYL-RKILSSIV----------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           ++ S + L R IL  I           ++G++   N      KV +EF S N     H G
Sbjct: 115 IFFSATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAG 174

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLP 197
           H R  ++G  +A+L    G++V +  Y+ D G Q   LA  V W+    + L+  +    
Sbjct: 175 HLRSTIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLA--VGWQKFGSEELFQKEP--- 229

Query: 198 EGYYPGVYLKHVGKELADKYSS-ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                   LKH    L D Y+    L  PE++     +D   Q   +I   + K L  + 
Sbjct: 230 --------LKH----LLDVYAKINTLFKPEQEASKNARDNG-QDTSEI---ENKGLYAER 273

Query: 257 DIFISEDDFHRGDPSPI------RDI-ID---------NLARQGYVYEGILPPPKSKTTQ 300
           + F  +     GDP  +      RDI I+         N+A   Y  E  + P   ++ +
Sbjct: 274 NAFFKK--MEDGDPDALSLWRRFRDISIERYIRTYARLNIAFDEYSGESTVRPETIESVE 331

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
           K  M +++ ++      ++ +R      G+ TY   D+A    +  +  FD MIYV+ ++
Sbjct: 332 K--MLKEKGIYEE----NEGNR-----GGTTTYLLRDIAAVLERVGKYKFDKMIYVVSAE 380

Query: 360 HSGYVKRLEAVAAA-----VSEKKAQINV--------------LLCELVRLYRDGMPIKM 400
              Y +R+           ++ K   +N               LL +++    + M   M
Sbjct: 381 QDSYFQRVFKTIEIMGYPDIATKLVHVNFGKVQGMSSRLGTVKLLSDILDECGNAMHEVM 440

Query: 401 SKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456
                 +  +   + V D VG  +V    +  K      FD  ++   +    P  Y+QY
Sbjct: 441 RANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMTSFEGDTGP--YLQY 498

Query: 457 AYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           ++AR  SI R+A+   D     DF L            +   + ++  +A+YP +  +A 
Sbjct: 499 SHARLCSIMRKAQLTADQVAKADFTLLK----------EPHAVDIVRLVAQYPDITSHAF 548

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLVHAVASIINS 572
              EP  +  YL+ L       +        ++ +  N     M+ R  L      ++ +
Sbjct: 549 KTLEPITVLTYLFRLTHQVSSAYD------VIKVLGMNEGPEVMLARSALYEGARQVLEN 602

Query: 573 GLNIIGV-----ESPNEM 585
           G+ ++G      ESP+EM
Sbjct: 603 GMRLLGFTPVARESPSEM 620


>gi|240120047|ref|NP_852071.2| probable arginyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|115502849|sp|Q3U186|SYRM_MOUSE RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|74220703|dbj|BAE33614.1| unnamed protein product [Mus musculus]
 gi|123232893|emb|CAM26873.1| arginyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
 gi|148673526|gb|EDL05473.1| arginyl-tRNA synthetase-like, isoform CRA_a [Mus musculus]
          Length = 578

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 128/567 (22%), Positives = 222/567 (39%), Gaps = 111/567 (19%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG------RNLI 117
           A  +  ++K D  V ++  AG   +N  ++   L K +L  +   G +YG       +L 
Sbjct: 65  ARRLAEKLKCDTVVTAI-SAGPRTLNFKINRELLTKAVLQQVTEDGCKYGLKSELFSDLP 123

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K  ++ +EF S N     HVGH R  ++G+ +A+L    G++VTR  YI D G Q   L
Sbjct: 124 KK--RIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGLL 181

Query: 178 ALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEK 228
                 + Y++ L  N    P  +   VY++ V KE  D     K + E    L   + +
Sbjct: 182 GTGFQLFGYEEKLQTN----PLQHLFDVYVQ-VNKEATDDKNVTKLAHEFFHRLEMGDTQ 236

Query: 229 WLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
            L +    +D S++   +I     K L I  D + S + F+R     +  ++D+      
Sbjct: 237 ALSLWQRFRDLSIEEYTQI----YKRLGIYFDEY-SGESFYREKSQDVLKLLDSKGLLQK 291

Query: 286 VYEGILPPPKSKT---TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
             EG +    S T   +  C                     +++SDG+  Y   DLA   
Sbjct: 292 TAEGNVVVDLSGTGDLSSVC--------------------TVMRSDGTSLYATRDLAAAI 331

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            + ++  FD MIYV       + +++  +   +    A+     C+ V     G+   M 
Sbjct: 332 HRMDKYNFDTMIYVADKGQRRHFQQVFQMLKIMGYDWAE----RCQHVPF---GIVKGMK 384

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-------------------------LLD 436
            R G    L  V++EV S  ++ M   +   +                         L D
Sbjct: 385 TRRGGVTFLEDVLNEVQSRMLQNMASIKTTKQLENPQETAERVGLAAVIIQDFRGTLLSD 444

Query: 437 FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           + F   +  QS+ +   ++QY +AR  S+       +      L   NV   +     S 
Sbjct: 445 YQFSWDRVFQSRGDTGVFLQYTHARLCSLEETFGCGY------LNDSNVACLQEPQSVSI 498

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANN 552
           LQ   HL  +  V+  ++   +P  +  YL     LA+V H              V+ + 
Sbjct: 499 LQ---HLLRFDEVLYLSSQDLQPKHIVSYLLTLSHLAAVAHKTLQ----------VKDSP 545

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579
             +   RL L  AV S++ +G+ ++G+
Sbjct: 546 PDVAGARLHLFKAVRSVLANGMKLLGI 572


>gi|218264603|ref|ZP_03478391.1| hypothetical protein PRABACTJOHN_04097 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221889|gb|EEC94539.1| hypothetical protein PRABACTJOHN_04097 [Parabacteroides johnsonii
           DSM 18315]
          Length = 597

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 72/308 (23%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K +++    + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E+V   R+     +S+  G    +   
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMEEMVGTARE-----ISQELGKMDEMTPE 433

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              ++   VG  S+++ +L    RKN      E +DF+          N   ++QY YAR
Sbjct: 434 EAENIARMVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484

Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            RS+ R+A +   + P+          +P  +     E  LI  +A+Y  V+  A     
Sbjct: 485 IRSVLRKAAEQGIVLPEQ---------LPTTTTISEKEENLIQMIADYASVVREAGKEYS 535

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y YDL   ++  +           ++  N ++   RL L   VA I+ S ++++
Sbjct: 536 PALIANYTYDLVKEYNQFYHD------FSILREENEEVKEFRLVLSANVAKIVKSAMSLL 589

Query: 578 GVESPNEM 585
           G+E P  M
Sbjct: 590 GIEVPERM 597



 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +++ +++ +    GHL+      L         T  E+    ++ +P V + F   KGF+
Sbjct: 26  NQVQLQKTKKEFKGHLTLVVFPFLRMSKKSPEQTAQEIGEYLLRHEPAV-AEFNVIKGFL 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGD 148
           NL ++ +    +L+ I      YG   + + +  V IE+ S N   P+H+GH R  ++G 
Sbjct: 85  NLTIACACWIDLLNGIN-GQPSYGIVPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNLLGY 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174
           +L+ +M  +G +V +   +ND G  I
Sbjct: 144 SLSEIMKANGNKVVKTNIVNDRGIHI 169


>gi|330836969|ref|YP_004411610.1| arginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748872|gb|AEC02228.1| arginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 587

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 47/286 (16%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+SDG+  Y   D+     ++E   FD++IYV+ S+   + + L  V   +    A   
Sbjct: 313 LLRSDGTSLYMTQDIGTAVQRHEDWPFDSLIYVVASEQQYHFRVLFHVLEKLGYSWAPTL 372

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------ 436
             L   +    +G   KM  R G  +    ++D + + +   ++   + +++ D      
Sbjct: 373 YHLSYGMVNLPEG---KMKSREGTVVDADDLIDNLTALAKEEIISKGRENDVDDINATAA 429

Query: 437 ------FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDI---FP 473
                  ++  ++    ++ +F              Y+QY  AR  S+ R+ +D+   F 
Sbjct: 430 SIALGALNYYLLQVTPSKDMIFNPKDSISFNGNTGPYLQYMGARISSMMRKWEDMREDFK 489

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D+ FD  P  +I  +      E +L+  LA YP V+  A   ++P  L  YLYDL+  F 
Sbjct: 490 DVPFD--PSVLILDD------ERELVRSLAAYPEVVGKAGEGKDPSVLTAYLYDLSRTFS 541

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             W H  +NP L+   A+++ L   R++L   V  ++ +   +IGV
Sbjct: 542 -RWYH--DNPVLK---ADSKSLVCARVELSSMVLYVLKNAFYLIGV 581



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 61  PLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117
           P  IA L+  +I+  P      + ++G  ++N+ +  P+   ++ S I   G  YG+   
Sbjct: 62  PPHIAALLKEKIEALPTRPAGELLVSGP-YLNVKIDIPTIAAELSSMIAREGTSYGKGSA 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             G +V +EF   N   P+H+GH R   +G++++ ++  +G +V +   IN+ G  I
Sbjct: 121 FDGKRVMVEFSCPNTNKPLHLGHLRNDSLGESVSRILKANGADVRKVNLINNRGVHI 177


>gi|294934539|ref|XP_002781131.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239891437|gb|EER12926.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 508

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 46/348 (13%)

Query: 43  GHLSTNAAMILSR------PLGLD-PLTIAELIVARIKIDP--DVDSVFIAGKGFINLYL 93
           G    N AM L++      P G+  P  I E I + +  +   + +SV +A  GF+ + L
Sbjct: 41  GDYQCNNAMGLAKKFKSELPDGMKIPKQIGEKIKSNLMEESPEEFESVTVAPAGFVTVKL 100

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           S  ++ K L+S    G +   +L  K    KV ++  S N    MHVGH R  ++G+T++
Sbjct: 101 SSGWIAKQLTSKCKDG-KVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLRSTILGETVS 159

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ +SG +V R  ++ D G Q   L   +   Y   L+         + P V       
Sbjct: 160 RILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLH---------HTPEV------S 204

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRG 268
           +L   Y +    F EE   P  K  S + ++ +   D    KA  I  D  IS   F   
Sbjct: 205 DLQTFYKAAKKRFDEE---PDFKKRSQEEVVALQSGDEYARKAWQICCD--ISRKSF--- 256

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK----CDMDRKQLLFRSTMVGDDVDRPL 324
           +    R  I+ L  QG  +   +  P  +T +K     + +  + +F      DDV   +
Sbjct: 257 EEVYNRLGIEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIFTDV---DDVPMMV 313

Query: 325 LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +KSDG Y Y + D+ A +    +   D ++Y+       + K+L  VA
Sbjct: 314 VKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVA 361


>gi|227872248|ref|ZP_03990609.1| possible arginine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841934|gb|EEJ52203.1| possible arginine--tRNA ligase [Oribacterium sinus F0268]
          Length = 310

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 23/248 (9%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-----KIDPDVDSVFIAGKG 87
           V  RP  C +    +N A++ ++    +P+ +AE +   +     K  P   SV     G
Sbjct: 30  VSNRPDLCDY---QSNGALMGAKKYQENPIALAEKVKGFLEKKSYKDTPLFSSVEAVKPG 86

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+N+ LSP +L   L  +     E    L  K G K+ +++  AN   P+HVGH R AV+
Sbjct: 87  FLNVKLSPQFLGAYLQGMQT---EEQNGLHEKEGRKILLDYGGANVAKPLHVGHLRSAVI 143

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G+ L  +    G  V  + ++ D G Q+  +   +  R +       S+L E  YP    
Sbjct: 144 GEALKRMGKRLGNNVVGDVHLGDWGLQMGLIITELEDRGELEKPFTISELEE-IYPFASK 202

Query: 207 KHVGK-ELADKYSSELLNFPEEKWLPIVKDYSV-----QAMMKIIRDDLK----ALNIQH 256
           K   K E  +  + E  N  +E  L + +   V     + +M++   DLK    AL++  
Sbjct: 203 KAKEKDEAGNLLNEEYANRAKENTLKLQQGDPVFHKVWERIMEVSVADLKKNYEALDVHF 262

Query: 257 DIFISEDD 264
           D++  E D
Sbjct: 263 DLWKGESD 270


>gi|89099438|ref|ZP_01172314.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085824|gb|EAR64949.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 562

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P++ AHG L+      L++ +   P  IA     +++    +D     G  ++N++
Sbjct: 28  LIEVPKNTAHGDLAF-PCFTLAKKMKQAPAVIAAEAAGKLQ-HSLIDQAEAHGP-YLNIF 84

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            S   +  +IL S++ +G  YG + +G G  + I+F + N   P  +GH R  V+G++++
Sbjct: 85  FSKEKVGLEILQSLLEAGSLYGNSSVGTGKTITIDFSAPNIAKPFSMGHLRSTVIGNSIS 144

Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177
            +    GYEV R  ++ D G Q   L
Sbjct: 145 LIAEKCGYEVIRINHLGDWGTQFGKL 170


>gi|332827351|gb|EGK00111.1| arginyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 598

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 58/308 (18%)

Query: 315 MVGDDVD-RPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +  D +D + LL+SDG+  Y   D+  A  + K  +    MIYV+G++ + + + L  V 
Sbjct: 312 LTADGLDHKLLLRSDGTSVYMTQDIGTAQQRFKAHKDLSEMIYVVGNEQNYHFQVLSIVL 371

Query: 372 AAVSEK--KAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
             +  +  K  ++     V L E     R+G  +       + I+   V  E        
Sbjct: 372 DKLGYEFGKGLVHFSYGMVELPEGKMKSREGTVVDADDLVEEMISTAKVTSEELGKLDGA 431

Query: 417 -----------VGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYA 457
                      VG  ++++ +L    +KN      E +DF+          N   ++QY 
Sbjct: 432 TEDEANNIARIVGMGALKYFILKVDPKKNMTFNPKESIDFN---------GNTGPFIQYT 482

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           YAR +S+ R+A D    +   L P +++         E  LI   AEY  V++ A     
Sbjct: 483 YARIQSVIRKAGDQGLSIPLSL-PTDIV-----LTPKEENLIQLAAEYAAVVKQAGDEYN 536

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y+Y+L   ++  +           ++  N  L   RL L   V  I+ SG++++
Sbjct: 537 PALIANYIYELVKEYNQFYHD------YTILKEENAALRDFRLVLSQEVGKIVKSGMSLL 590

Query: 578 GVESPNEM 585
           G+E P+ M
Sbjct: 591 GIEVPDRM 598



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTK 122
           I E +VA      +V+S F   KGF+NL +S +   + L+S V S   YG + +      
Sbjct: 63  IGEWLVANT---SEVES-FNVIKGFLNLTISGACWLQELNS-VRSVANYGIQEIKADAPL 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           V +E+ S N   P+H+GH R  ++G  L+ ++  +G  V +   +ND G  I
Sbjct: 118 VMVEYSSPNTNKPLHLGHVRNNLLGFALSEVLKANGKRVLKTNIVNDRGIHI 169


>gi|34540109|ref|NP_904588.1| arginyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932030|sp|Q7MXD5|SYR_PORGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34396420|gb|AAQ65487.1| arginyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 597

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 66/305 (21%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS------------------ 361
           ++ LL++DG+  Y   D+   K ++ +   + MIYV+G++ +                  
Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKMRFNDYPINRMIYVVGNEQNYHFQVLSILLDRLGFEFG 378

Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410
                   G V+  E    +        + L+ E++R        +++  AG    +   
Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMDEMIR-----TAAEIAAEAGKAAEMDEE 433

Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460
             R V   VG  S+++ +L    RKN      E +DF+          N   +VQY YAR
Sbjct: 434 ESREVARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGSFVQYTYAR 484

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            RS+ R+A+    D+   L      P +      E  LI  ++EY  V+  A  +  P  
Sbjct: 485 IRSLMRRAEAAGYDIPSQL------PTDLPLSEKEEALIQKVSEYAEVVSEAGHSYSPAL 538

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A Y+YDL   ++  +           ++  + ++   RL L   VA  +  G  ++G+E
Sbjct: 539 IANYIYDLVKEYNQFYHD------FSVLKEEDERIRAFRLALSEVVALTMRKGFALLGIE 592

Query: 581 SPNEM 585
            P  M
Sbjct: 593 MPERM 597



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL ++P    ++L+ I    I +G  +  + +  V +E+ S N   P+H+GH R  
Sbjct: 81  KGFLNLTIAPRVWLELLNEIRAD-INFGHKVATEDSPLVMVEYSSPNTNKPLHLGHVRNN 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +L+ +M  +GY V +   +ND G  I
Sbjct: 140 LLGYSLSEIMKANGYRVVKTNIVNDRGIHI 169


>gi|225389885|ref|ZP_03759609.1| hypothetical protein CLOSTASPAR_03634 [Clostridium asparagiforme
           DSM 15981]
 gi|225044078|gb|EEG54324.1| hypothetical protein CLOSTASPAR_03634 [Clostridium asparagiforme
           DSM 15981]
          Length = 350

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 36/279 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA-GKGFIN 90
           ++  RP  C +     N +M  ++     P+ IA  +V ++     + S+  A   GFIN
Sbjct: 29  VLSNRPDLCEY---QCNGSMAAAKAYRKKPIDIANGVVEQLGDGQGMFSMVQAVMPGFIN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L LS  +L   +  +  +G + G     K   + +++  AN   P+HVGH R AV+G+++
Sbjct: 86  LKLSGQFLADYMKGMA-AGEKLGLEKPEKPETIIVDYGGANVAKPLHVGHLRAAVIGESI 144

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L  F G+ +  + ++ D G Q+  +   +  R  + +Y ++S    G YP      +G
Sbjct: 145 KRLGNFLGHHMIGDVHLGDWGLQMGLIIEELRDRKPELVYFDESYT--GEYPEEAPFTIG 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--------------IIR---DDLKA-- 251
            EL + Y +      E++     K+ + QA +K              IIR    DLK   
Sbjct: 203 -ELEEIYPAASAKSKEDE---AFKERAHQATLKLQNGYAPFRAIWNHIIRVSVTDLKKNY 258

Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
             LN+  D++  E D    +P  I  +I+ L  +G  YE
Sbjct: 259 SNLNVTFDLWKGESD---AEPY-IPKLINLLTEKGLAYE 293


>gi|330721860|gb|EGG99825.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 462

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 58/295 (19%)

Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQI 381
           KSDG + Y  +DLA  + +  E   + ++Y + +  + +++++  +A     V+E     
Sbjct: 191 KSDGGFLYATSDLAALRYRQNELNAERILYFVDARQALHLQQVFTIARKAGFVNENTGLE 250

Query: 382 NVLLCELVRLYRDGMPIKMS---------------KRAGDFI----------TLRHVVDE 416
           ++    +  + +DG P K                 +RA   I          T + V  +
Sbjct: 251 HLAFGTM--MGQDGKPFKTRTGGTVKLAALLEESVERAAQLIAEKDPDLDAETRQQVARK 308

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDL 475
           VG  +V++  L +  +   D+ F      S E N   Y+QYAY+R +SIFR+A       
Sbjct: 309 VGIGAVKYADLSKNRTS--DYIFNWDSMLSFEGNTAPYLQYAYSRIQSIFRKA------- 359

Query: 476 DFDLFPRNVIPQESEFD-----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                   V PQ  E +     ++E+ L + L ++  V+E       P  L  YLY+LAS
Sbjct: 360 -------GVEPQALEGELQLALSNEVALGLKLLQFSEVVEQVADDCAPNVLCAYLYELAS 412

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   +      P L+  +  + +    RLQL H VA  +++GL+++G+E    M
Sbjct: 413 EYMSFY---EACPILK--EGVDEQTRGSRLQLCHLVARTLSTGLDLLGIEVMERM 462



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           +++   N    MHVGH R  ++GD +  ++ FSG +V R+ ++ D G Q   L
Sbjct: 1   MDYSGPNLAKEMHVGHLRSTIIGDAVVRVLEFSGDKVIRQNHMGDWGTQFGML 53


>gi|289812032|ref|ZP_06542661.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 259

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 28/269 (10%)

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCR 142
           G GFIN++L P++L + +   + S     R  + + T+  I  ++ + N    MHVGH R
Sbjct: 1   GPGFINIFLEPAFLAEQVQQALTSD----RLGVSQPTRQTIVVDYSAPNVAKEMHVGHLR 56

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD     + F G+ V R  ++ D G Q   L   + W  +Q    N  D+      
Sbjct: 57  STIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLE 112

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y        A K+  E   F E     +VK   +Q+     R+  + L    DI +++
Sbjct: 113 GFYRD------AKKHYDEDETFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQ 160

Query: 263 DD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---G 317
           +   + R + +  RD +   +    +  GI+   K+K     + +   ++F        G
Sbjct: 161 NQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEG 219

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           D +   + K DG Y Y   D+A  K +YE
Sbjct: 220 DPMGVIIQKKDGGYLYTTTDIACAKYRYE 248


>gi|329764907|ref|ZP_08256496.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138576|gb|EGG42823.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 516

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 23/178 (12%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARC-RSIFRQ 467
           + H+V  VG+  +R+ M+ +   +++ FD   VK  S E +   Y+QY +AR  R I + 
Sbjct: 360 IAHIV-SVGT--LRYEMIKQDLDKIITFDL--VKSLSLEGDTASYIQYTHARASRIIEKS 414

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            +    D+DF L            D SEL L+  +  +  V+ NA     P  +A Y +D
Sbjct: 415 GRSPSIDVDFSLLT----------DDSELGLVKTIGLFELVVLNAAQNLSPKVIARYCHD 464

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA  F+  + H      ++ +   ++KL   RL LV++    +   L ++G+E+P++M
Sbjct: 465 LAVSFNSFYEH------VKVIDLGDQKLENSRLCLVNSFKMTLEKSLGLLGIEAPDKM 516



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +GK + + +E  S NP   +H+GH R  ++GDT+A ++  S Y+V    Y++D+G Q+
Sbjct: 1   MGKNSSIVVEHTSVNPNKALHIGHIRNIIIGDTIARILKKSNYKVNVLNYVDDSGLQV 58


>gi|148655458|ref|YP_001275663.1| arginyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148567568|gb|ABQ89713.1| arginyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 613

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGI 110
           ++  G+ P  +A+ IV + ++     + SV   G  F+N  L +P     +L  +   G 
Sbjct: 48  AKEAGIAPPQLAQRIVEKAQVPAGSLIGSVEATGP-FVNFSLDAPGLAAAVLDEVERLGA 106

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            YG +  G G  + I++ S N    MHVGH R  ++G +L  +  F GY V  + ++ D 
Sbjct: 107 RYGSDDQGAGKTIVIDYSSPNVAKTMHVGHIRSTIIGQSLYHIFDFLGYRVIGDNHLGDW 166

Query: 171 GAQIN-TLALSVFW 183
           G Q    +A  V W
Sbjct: 167 GKQFGMNIAAIVRW 180



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 54/295 (18%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           L +SD    Y   DLA    + ER F    +IYV+ +    + ++L A+A A+   +  I
Sbjct: 340 LQRSDSGTLYHTRDLACIVYR-EREFHPAKIIYVVDARQELHFRQLFALARAMGYAQ-DI 397

Query: 382 NVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
            ++      ++ + G P  +S RAG+ + L  ++DE                        
Sbjct: 398 ELIHVRFGTIFDQQGRP--LSTRAGNMVYLADLLDEAHARARAVVEQASPDLSEAEKEAI 455

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--- 470
              VG  +V +  L++     +  D+ ++    + N   Y+QY +ARC SI R+A +   
Sbjct: 456 AEAVGVGAVIYNDLYQDPRRDIRLDWERML-AIEGNSAPYIQYMHARCCSILRKAAEEGI 514

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                D  L              SE  +I  LA+ P  +  A     P+ +A + Y+ A 
Sbjct: 515 AAEGGDAALLTH----------PSETAVIKQLAKLPGAVREAGERYAPFVIAEWCYETAR 564

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +   R+   LR   A    L   RL+LV A A  + +GL ++G+++P  M
Sbjct: 565 ALSAFY---RDCSVLR---AETPALRAARLRLVAATAQGLRNGLALLGIKAPERM 613


>gi|254382504|ref|ZP_04997863.1| arginyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341408|gb|EDX22374.1| arginyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 600

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 19/169 (11%)

Query: 24  VEKKILDRIVIERP---------RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           V +++ D +V   P         R         N  + L++    +P  +A  +V  I  
Sbjct: 11  VNQRVADALVSALPEAGAADPLLRRSDRADFQANGILALAKKAKANPRELATTVVGGIPT 70

Query: 75  DPDVD---SVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFV 128
             + D    + ++G GF+N+ +S   + + L++       G+ +  N    GT V I++ 
Sbjct: 71  GGEGDVIREIEVSGPGFLNITVSDRAIIETLAARAGDDRLGVPFSPN---AGTTV-IDYA 126

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             N    MHVGH R AV+G  +  ++ F+G +V R ++I D G Q   L
Sbjct: 127 QPNVAKEMHVGHLRSAVIGAAMVEILEFTGEKVVRRHHIGDWGTQFGML 175



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 50/297 (16%)

Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           PL+  KSD  + Y A DL+  + +        +IYV+ +  S + K +   A        
Sbjct: 320 PLIVQKSDSGFGYAATDLSAIRDRVGGLKASTLIYVVDARQSLHFKMVFETARRAGWLNE 379

Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +  V L     L +DG P K   R G+ + L  ++DE                      
Sbjct: 380 DVQAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVDRATAVVREKAGKVGLSEAE 437

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR RSI R+A 
Sbjct: 438 IVENGRFVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKAA 496

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +       D  P  V   E E   +E  L +HL ++  +I  A     P+KLA YLY L+
Sbjct: 497 EAG-----DRTP--VAHPELELAPAERALGLHLDQFGELIAEAAAEHAPHKLAAYLYQLS 549

Query: 530 SVFHGHWSHGRE-NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S+F   +       P    V   N      RL L    A  +  G++++G+ +P  +
Sbjct: 550 SLFTTFYDQCPVIKPEPELVVGEN------RLFLCDLTARTLTKGMSLLGIRTPERL 600


>gi|126649241|ref|XP_001388293.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
 gi|126117131|gb|EAZ51231.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
          Length = 616

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSI-------VVSGIEYGRNLIGKGTKVNIEFVSANP 132
           S+ +A +GFI + LS  +++  LS +       V   +++      K  KV ++F S N 
Sbjct: 84  SIEVAPQGFITIKLSDEFIQNNLSKLQEMDEVKVTPTMKFHCKSGRKTPKVIVDFSSPNI 143

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN- 191
              MHVGH R  ++GDT   ++ + G+EV R  ++ D G Q   L   +   Y   + N 
Sbjct: 144 AKEMHVGHLRSTIIGDTTCRILEYLGFEVLRVNHVGDWGTQFGMLIEYLKEEYPTFVENL 203

Query: 192 -NDSDLPEGY 200
              SDL E Y
Sbjct: 204 PEISDLQEFY 213



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 18/141 (12%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEF-----DTSELQLIV 500
           K N   Y+ YAYAR  +IFR+ + I  D         VI Q+ S F     +  E +L +
Sbjct: 484 KGNTAVYLLYAYARICAIFRKVEFIQSDNSM------VIKQKVSNFKLKISNNVERKLSI 537

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +P V +       P +LA Y Y+L+  F   ++        R +    ++L   RL
Sbjct: 538 QLLRFPEVFDGILNDFFPNRLADYCYELSECFAQFYTE------CRIIGLEEQQLEQSRL 591

Query: 561 QLVHAVASIINSGLNIIGVES 581
            L      I+  GL+++GVE+
Sbjct: 592 LLCFLTKQILLKGLDLLGVET 612


>gi|320334541|ref|YP_004171252.1| arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755830|gb|ADV67587.1| Arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 613

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           VI+       G   T AA +L++ L  +P   A  + + I++   +      G  ++N +
Sbjct: 25  VIQETPPGKPGDYGTPAAFLLAKSLRGNPAAFAAQLASTIELPSGIARAEAMGP-YLNFF 83

Query: 93  LS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +   +++R I+        + G        K+ IE  S NP   +HVGH R  V+GD++A
Sbjct: 84  VDVGTFVRSIVEDTATPEAQSG--------KIVIEHTSVNPNKELHVGHVRNVVLGDSMA 135

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
            +   +GY V  + YI+D G Q    A S+F R
Sbjct: 136 RIFRAAGYPVEVQNYIDDTGRQA---AESLFAR 165



 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 18/181 (9%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAK 469
           + +   +G  ++RF M+  + +  +DF + + +  Q    P  YVQYA  R  +I ++A 
Sbjct: 445 QEIARRIGLGALRFAMMRNEPTRQIDFRWEQALTLQGDTAP--YVQYAAVRAGNILKKAA 502

Query: 470 D---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
               +      D        Q ++ D +  + ++ L   P VI  A     P+ +A Y  
Sbjct: 503 AEGYVSDGAGADW------AQLTDLDLTLAKTVMRL---PEVIGTAVRVHSPHVVAAYAL 553

Query: 527 DLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           DLA  F+  W + +  E      V A+       RL LV  + +     L+++G++ P+ 
Sbjct: 554 DLAGAFN-SWYNAKTPEGKAATNVLASPAGQREARLALVRKLRATFEETLDLLGIQVPSA 612

Query: 585 M 585
           M
Sbjct: 613 M 613


>gi|255933225|ref|XP_002558083.1| Pc12g12720 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582702|emb|CAP80899.1| Pc12g12720 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 646

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 111/533 (20%), Positives = 216/533 (40%), Gaps = 114/533 (21%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ IEF S N   P H GH R  ++G  LA++    G++V +  Y+ D G Q   LA   
Sbjct: 156 KIIIEFSSPNIAKPFHAGHLRSTIIGGFLANIYTVMGWDVIKMNYLGDWGKQYGLLANGF 215

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKD 235
            ++  ++AL  +    P  +   VY+K V +++++     K   E +   +EK   + + 
Sbjct: 216 KYFGNEEALVKD----PINHLFDVYVK-VNRQVSEQEGPIKELKEQIKAKKEKSEDVAEL 270

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGY---- 285
            +  A +  + +D KA       F S +D   GDP  +      RD+     +Q Y    
Sbjct: 271 ETELAKLVDVSEDEKA----RRYFKSMED---GDPEALALWRKFRDLSIEKYKQTYARLN 323

Query: 286 ----VYEGILPPPKSKTTQKCDMDRKQLLFRSTM-------------------VGDDVDR 322
               VY G     +S+   +   D  +L+ ++ +                   +G  +  
Sbjct: 324 IDFDVYSG-----ESQIKSESMTDAYKLMEQAGVSEKSEGAVIVDFTKHGAKKLGKAI-- 376

Query: 323 PLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            +++ DG+  Y   D+ A  +   E  FD MIYV+ +    ++ +L  V   +  K    
Sbjct: 377 -IVRKDGTPLYLTRDIGAITERDNEYHFDKMIYVVAAQQDLHLAQLFKVTELMGHKDLAS 435

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSVRFMMLW--RKN 431
               C+ +     GM   MS R G    L  ++ +VG         + V++  +    K 
Sbjct: 436 R---CQHINF---GMVRGMSTRKGTVKFLDDILRDVGDKMHEVMKKNEVKYSQVEDPEKT 489

Query: 432 SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAK---DI 471
           +++L      V++ + +                 +   Y+QYA+AR  S+ R+++   + 
Sbjct: 490 ADILGITSVMVQDMTGKRVNGYDFNLDAMTSFEGDTGPYLQYAHARLCSMARKSELDVNE 549

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             + +FDL            +   + L+  LA++P V+       EP  +  YL+ +  +
Sbjct: 550 LVNANFDLLT----------EQHAVDLVRLLAQWPDVLLQTAKTLEPITVLSYLFKMTHM 599

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
               +        +  V  +   +   R+ L  +   ++++G+ ++G+ SP E
Sbjct: 600 LSSSYD-------VLKVIGSEPDVKQARMALYASARQVLHNGMRVLGL-SPVE 644


>gi|21672518|ref|NP_660585.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654287|sp|Q08888|SYR_BUCAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21623140|gb|AAM67796.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 580

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 1/156 (0%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           IK+       + I   +    GH   +  M +S  L + P  + + I+  I+       +
Sbjct: 16  IKINSNYTYEVFIISSKKIELGHYQVDNLMKISSRLKIKPYKLFQKILILIEKKKIYKKI 75

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
             +  GFIN+++   +L + L    +S    G   I     + I++ S N    MHVGH 
Sbjct: 76  IFSHPGFINIFIKNEWLSEKLEIPFISS-RLGVKYIYPKKNIVIDYSSPNIAKEMHVGHL 134

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           R  ++GD    ++ F G +V R  +I D G Q   L
Sbjct: 135 RSTIIGDVTVRILEFLGQKVIRANHIGDWGTQFGIL 170



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 48/304 (15%)

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369
           F++ M GD +   + K D  + Y   D+A  K +Y+    D +IY   +D   Y   L++
Sbjct: 296 FKNRM-GDSMGVIIRKKDKGFLYSTTDIACLKYRYQNLHADRIIYY--TDSRQYQHLLQS 352

Query: 370 VAAAVSEKKAQINVLLCELV---------RLY--RDGMPIKMSK-------RAGDFIT-- 409
              A        N+LL   +         R +  RDG  IK+S        RA + I   
Sbjct: 353 WTIAEKANYISKNLLLEHHMFGMMLSKNRRPFKTRDGNTIKLSNLLNESINRATNLIQKK 412

Query: 410 --------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                   L  + + +G  +V++  L +  +    FD+ K+    + N   Y+QYAY R 
Sbjct: 413 QPNLCKKKLIKLGEIIGISAVKYSDLSKNRNTNYIFDWDKM-LSFEGNTAPYIQYAYTRI 471

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI +++     ++        +I  E     SE+ L + + E+  +I        P+ +
Sbjct: 472 ISILKKS-----NIPLHKIKMKIILNEE----SEINLAIKILEFEEIILLIAKNGTPHIM 522

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YLY L++ F    SH  EN  + F  +   K+   R++L    A  I  GLN++G+++
Sbjct: 523 CKYLYQLSTYF----SHFYENCSILF--SEKIKIRKSRIKLSFLTAKTIKKGLNLLGIKT 576

Query: 582 PNEM 585
             +M
Sbjct: 577 IKKM 580


>gi|330861412|emb|CBX71641.1| hypothetical protein YEW_GQ28450 [Yersinia enterocolitica W22703]
          Length = 244

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 33/210 (15%)

Query: 393 RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVRFMMLWRKNSELL 435
           R G  +K+S       +RAG  I           L+ VV+ VG  +V++  L +  +   
Sbjct: 51  RSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDY 110

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD+  +      N   Y+QYAY R  S+F++A     +L   L    VI ++ E     
Sbjct: 111 IFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVDESNLILPL----VITEDRE----- 160

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L   L ++  VI        P+ +  YLYDLA +F   + H       + + A++ + 
Sbjct: 161 AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH------CQILNADSEES 214

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL+L    A  +  GL+ +G+++   M
Sbjct: 215 RQSRLKLAMLTAKTLKQGLDTLGIQTVERM 244


>gi|224008801|ref|XP_002293359.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970759|gb|EED89095.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 553

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 116/535 (21%), Positives = 211/535 (39%), Gaps = 99/535 (18%)

Query: 56  PLGLD-PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--- 110
           P G++ P  +A+ I+  +  D P +  + + G GFI   +   YL + ++ I+ +G    
Sbjct: 14  PEGVNSPQDVAKAIIDAVPSDNPVLCEMNVNGPGFIMSRIKREYLERGVNHIIKNGAPTK 73

Query: 111 --EYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               GRN   G G  V ++F S N    MHVGH R  ++G+++  ++++ G++V R  ++
Sbjct: 74  PKSAGRNDASGGGGVVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILSYVGHDVKRINHV 133

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            D G Q   L         Q L     D   G  P +       +L + Y +  + F E 
Sbjct: 134 GDWGTQFGMLI--------QYLKEEYPDF-HGDIPNI------TDLTEFYKNAKMRFDES 178

Query: 228 KWLPIVKDYSV--------------QAMMKIIRDDLKALNIQHDIFISE--DDFHRGDPS 271
                +   +V              Q +  + R + + +  + DI + E  + F+    +
Sbjct: 179 PEFKKISQLNVVKLQAGDEECRKIWQVLCDVSRKEFEKVYDRLDITVEECGESFYNDKIA 238

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           P   +I+    +G V          +   KC    K            V   L KSDG Y
Sbjct: 239 P---VIEEFDSRGLV-------SVEEGGAKCVFVPKY----------KVPLMLQKSDGGY 278

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCE 387
            Y + D+A  K + ++     ++Y+       + + + A A     VSE   +++ +   
Sbjct: 279 GYDSTDMAAIKYRLDQMKASQIVYITDFTQGDHFQMVFAAAKKIGWVSEDSHRLDHIGFG 338

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
            V+   DG   K   R+GD + L  ++DE                               
Sbjct: 339 TVQ-GEDGKRFKT--RSGDTVRLVDLLDEAVSRMETSLKERATDGKAAVDDAEIHATASA 395

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G  +V++  L R  +    F + ++ + +K N   Y+ YA+AR  SI  + K  F  +D
Sbjct: 396 MGYGAVKYFDLRRNPTSNYIFSYDRMLD-TKGNTAIYLLYAHARLESIISKGKAEF-GVD 453

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            D   +    +      SE  L +HL  +   +E       PY +  ++Y L++ 
Sbjct: 454 VDELIKAGKAKIILAHKSERNLGLHLEFFADAVEETLNDLFPYHICDFVYALSNA 508


>gi|154339890|ref|XP_001565902.1| arginyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063220|emb|CAM45422.1| putative arginyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 692

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)

Query: 48  NAAMILSRPLGLDPLTIA---ELIVARIK---IDPDV-DSVFIAGKGFINLYLSPSYLRK 100
           N AM L + L   P +I    +++   +K   ++ D+ D      KGFIN+ +   ++ +
Sbjct: 47  NNAMGLVKVLSQQPQSIKMSPQMVGEELKKNLVENDIIDEFEPTTKGFINISIRKEWVAQ 106

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +++ ++  GI   R  + K  +V ++F S N    MHVGH R  ++G++++ L+ F  ++
Sbjct: 107 MVNEVLNQGI---RPPVVKKQRVLVDFSSPNIAKEMHVGHLRSTIIGESISRLLEFCLHD 163

Query: 161 VTREYYINDAGAQINTLALSV 181
           V+R  +I D G     L L +
Sbjct: 164 VSRINHIGDWGTAFGMLILYI 184


>gi|325279315|ref|YP_004251857.1| Arginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324311124|gb|ADY31677.1| Arginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 596

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 48/302 (15%)

Query: 315 MVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGSDHSGYVKRLEA 369
           + GD +D + LL+ DG+  Y   D+      YER      D MIYV+G++ + + + L  
Sbjct: 312 LTGDGLDHKLLLRDDGTSVYMTQDIG---TAYERFNEFDMDEMIYVVGNEQNYHFQVLSL 368

Query: 370 VAAAV----SEKKAQINVLLCELVR---LYRDGMPIKMSKRAGDFI-TLRHVVDEVGS-- 419
           +   +    ++K   ++  + EL       R+G  +       + I T R    E+G   
Sbjct: 369 ICGKLGFPWADKIKHLSYGMVELPEGKMKSREGTVVDADDLMAEMIDTARETSQELGKLD 428

Query: 420 --DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463
                    ++RK + L    +  +K   K+  +F              ++QY YAR +S
Sbjct: 429 GYSEAEAEEVYRKVA-LGALKYFILKVDPKKTMMFNPKESIDFNGNTGPFIQYTYARIQS 487

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           + R+A     D        +   Q SE    E  LI  +A+ P V++ A     P  LA 
Sbjct: 488 VLRKA----ADAGASPLSADTHIQLSE---KEQNLIKLVAKLPDVVKEAGTTYSPALLAN 540

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y YDLA  F+  +           ++  N  L   RL L       I + + ++G+E P 
Sbjct: 541 YAYDLAKEFNQFYHD------FSILKEENEALRNFRLLLAKQCGEAIKNAMGMLGIEMPE 594

Query: 584 EM 585
            M
Sbjct: 595 RM 596



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+N+ +S +Y   +L+  V    +YG      G    IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNIEISAAYWVGVLNE-VAQDPKYGYVHENSGHSYMIEYSSPNTNKPLHLGHIRNNL 139

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G +++ +   +G+EV     +ND G  I
Sbjct: 140 LGWSVSEIQKANGHEVRMVNLVNDRGIHI 168


>gi|118575544|ref|YP_875287.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194065|gb|ABK76983.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 607

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 51/326 (15%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           P     G LS N   +L++  G  P  IA+ +  + K    +        G++N  L   
Sbjct: 19  PSKPGFGDLSCNVPFLLAKSRGRAPFEIAQELAVQYKTGGVIAGAEAHPGGYLNFSLDWG 78

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
               I +  +V     G      G  V +E  S NP   +H+GH R  V+GD++A +++ 
Sbjct: 79  ----IAAKEIVIEAAGGGPAPAGGGPVTVEHTSVNPNKALHIGHVRNIVIGDSVARILSR 134

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELA 214
            GY+V+   YI+D+G Q+  + L             +  +PE   PG   + ++ G ++ 
Sbjct: 135 EGYKVSVLNYIDDSGLQVADIILGF----------TELGIPE-EPPGGKKFDQYCGDDVY 183

Query: 215 DKYSSELLNFP--EEKWLPIVKDY------SVQAMMKIIRDDLK-------ALNIQHDIF 259
            K +      P  +EK   I++        +     +I R  L         L +Q+D  
Sbjct: 184 AKAAGACEEDPGLKEKRAVILRGLEDGTSETAHLADRITRRVLDGQLETCWGLGVQYDCL 243

Query: 260 ISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
             E    R   S + D + + L +      G+L   K      C       +FRS   G 
Sbjct: 244 NFESQIVR---SGLWDEVFERLKKM-----GLLELEKDGKNAGC------WVFRS---GT 286

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK 344
           D D+ +++SDG+ TY A D+ Y   K
Sbjct: 287 D-DKVVVRSDGTATYIAKDIPYAAWK 311


>gi|326800404|ref|YP_004318223.1| arginyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551168|gb|ADZ79553.1| Arginyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 589

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 2/89 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL L+ S+  ++L +  +S  ++G  +   G +V +E+ S N   P+H+GH R  +
Sbjct: 78  KGFLNLSLTDSFWLQLLDT-EISKPDFGE-IPKNGKRVMVEYSSPNTNKPLHLGHVRNNL 135

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G ++A+++  +GYEV +   +ND G  I
Sbjct: 136 LGFSVAAILEAAGYEVIKTNLVNDRGIHI 164


>gi|302558389|ref|ZP_07310731.1| arginine-tRNA ligase [Streptomyces griseoflavus Tu4000]
 gi|302476007|gb|EFL39100.1| arginine-tRNA ligase [Streptomyces griseoflavus Tu4000]
          Length = 324

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 12  KNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +  L+ + C +   ++   + +R+ +  P     G  +TN A+ L+RP G     +AE++
Sbjct: 8   RTVLRAVRCAVDEGELRVAVPERVRVAPPGPGGCGDYATNVALQLARPAGRPAQHVAEVL 67

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             R+  DP V  V I G GF+N+ L+ +    ++  I+ SG  YG     KG  V +  V
Sbjct: 68  RPRLLRDPGVGDVVITGPGFLNISLADAAPVALVREILRSGTSYGHGDALKGRTVRLRAV 127

Query: 129 S 129
           S
Sbjct: 128 S 128



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 112/299 (37%), Gaps = 36/299 (12%)

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P  +  Q      +  L R   VGD V    +   G      AD A      E       
Sbjct: 55  PAGRPAQHVAEVLRPRLLRDPGVGDVV----ITGPGFLNISLADAAPVALVREILRSGTS 110

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI---TL 410
           Y  G    G   RL AV    SE +A ++  +   V L   G  + +   AG  I     
Sbjct: 111 YGHGDALKGRTVRLRAV----SEARAVVHSDVVARV-LRSQGALVHLDDPAGVLIRPVPA 165

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +G D+ R+ +L+    +        +  Q + NP+F V+YA+AR R++ R A  
Sbjct: 166 PADPAPLGPDAGRWALLYPAPHDRPRIGGEHLV-QRESNPLFRVRYAHARTRALLRNAG- 223

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA- 529
              DL +   P  V   E+        L+  LA++PRV+  A     P +LA +L  +A 
Sbjct: 224 ---DLGYGPEPGPVGEAEAR------SLLRVLADHPRVLAAAAAQHAPDRLARHLVAVAD 274

Query: 530 ---SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +       G E P                        +++  GL+++G+++P+ +
Sbjct: 275 ALPPLLPAVLPLGEEKPSAAHRARLALADAA---------GTVLAGGLSLLGIDAPDHL 324


>gi|146090829|ref|XP_001466367.1| arginyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134070729|emb|CAM69084.1| putative arginyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 692

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           +P+ + P  + E +   +  +  +D      KGFIN+ +   ++ +++  ++  GI   R
Sbjct: 61  QPIKMSPQMVGEELKKNLVGNDIIDEFEPTPKGFINVSIRKEWVARMVKEVLKQGI---R 117

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             +    +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G   
Sbjct: 118 PPVVTKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAF 177

Query: 175 NTLALSV 181
             L L +
Sbjct: 178 GMLILYI 184


>gi|322500204|emb|CBZ35281.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 692

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           +P+ + P  + E +   +  +  +D      KGFIN+ +   ++ +++  ++  GI   R
Sbjct: 61  QPIKMSPQMVGEELKKNLVGNDIIDEFEPTPKGFINVSIRKEWVARMVKEVLKQGI---R 117

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             +    +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G   
Sbjct: 118 PPVVTKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAF 177

Query: 175 NTLALSV 181
             L L +
Sbjct: 178 GMLILYI 184


>gi|311244159|ref|XP_003121335.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 225

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 16/177 (9%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMI----LSRP-LGLDPLTIAELIVARIKIDPDVDSV 81
           K +  + I R  + A   LS ++ +      SRP + +  + +AE    ++K D  V  +
Sbjct: 26  KSISAVPISRKEEVADFQLSVDSLLENNNDHSRPDIQIQAMRLAE----KLKCDTVVSEI 81

Query: 82  FIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPM 136
              G+G +N  ++   L K +L  ++  G +YG ++ +  G    K+ +EF S N     
Sbjct: 82  -STGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKF 140

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNN 192
           HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L      + Y++ L +N
Sbjct: 141 HVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN 197


>gi|8250401|emb|CAB93578.1| putative arginyl-tRNA synthase [Lactococcus lactis]
          Length = 262

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 57/288 (19%)

Query: 329 GSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQINV 383
           G+  Y   DLA   Y K  +   F   +YV+G + + + K+L+AV   A        ++V
Sbjct: 1   GATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDDMVHV 58

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
               + +  +     K S R G  + L   +DE                         VG
Sbjct: 59  PFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVAKQVG 113

Query: 419 SDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             +V+F  L    +   DFD  + V  + +  P  YVQYA+AR +SI R+A       + 
Sbjct: 114 VGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKANRKVNIDNI 171

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L            D    +++  L E+P +++ A    EP  +A Y   LA  F+ +++
Sbjct: 172 SLVVS---------DAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFNKYYA 222

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       +  ++ +L   RL L+ A + ++   L ++GV +P  M
Sbjct: 223 HVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 262


>gi|41207537|gb|AAR99638.1| ArgS [Lactococcus lactis subsp. cremoris MG1363]
          Length = 204

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE+P+    G L+   A  L++ L   P  IA  I    KID       IA   ++N +
Sbjct: 27  IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83

Query: 93  LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L   +   +++  ++  G  YG   IG+G  V I+  + N   P  +GH R  V+GD++A
Sbjct: 84  LDKNATASEVIREVLAEGEHYGDANIGEGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
            +    GY+  +  ++ D G Q   L ++ + +Y
Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKY 176


>gi|119568972|gb|EAW48587.1| arginyl-tRNA synthetase-like, isoform CRA_d [Homo sapiens]
          Length = 359

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 147/331 (44%), Gaps = 51/331 (15%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 57  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172

Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219
           D G Q   L      + Y++ L +N    P  +   VY++ V KE AD  S         
Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227

Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           + L   + + L +    +D S++  +++     K L +  D + S + F+R      +++
Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335
           +  L  +G + + I      K T   D+            GD      +++SDG+  Y  
Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
            DLA    + ++  FD MIYV+    S + K
Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVIKDKKSIFSK 355


>gi|195137498|ref|XP_002012565.1| GI21379 [Drosophila mojavensis]
 gi|193918548|gb|EDW17415.1| GI21379 [Drosophila mojavensis]
          Length = 212

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 14/167 (8%)

Query: 43  GHLSTNAAMILSRPL---GL--DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G    N AM L++ +   G+   P  IA+ I   +   P ++ V ++  GFIN+++S   
Sbjct: 45  GDYQCNNAMGLAKKMKEQGIIKTPRDIAQDIQKCVPESPIIEKVEVSSAGFINIFISKKL 104

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
               L++++  GI+  +  + K  +V ++F S N    MHVGH R  ++G+++  L+ F 
Sbjct: 105 AVLSLTNMLRYGIQPPK--VSK-KRVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFL 161

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGY 200
            ++V R  ++ D G Q   L   +  R+    + N+S    DL E Y
Sbjct: 162 QHDVIRINHLGDWGTQFGMLIAHLEDRFPN--FQNESPPIGDLQEFY 206


>gi|320008558|gb|ADW03408.1| DALR anticodon binding domain protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 370

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%)

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T   +++ +G+D+ R+ +L     +  D     +  Q + NP+F V+YA++R R++ R+A
Sbjct: 210 TAAELLERLGADATRWGLLRPAGHDRADLGEALLV-QGEANPLFLVRYAHSRARALSREA 268

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           + +     +D             D     L   LA++P V+ +A   Q P +LA +L  +
Sbjct: 269 ERLGFTAGYDQ------------DVDAPSLHAALADHPGVLASAARHQAPDRLARHLETV 316

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F   +      P L             RL L  A  +++  GL+++G+ +P  +
Sbjct: 317 AHAF---FDLHDTCPPLPVGDEKPSAAHRSRLALAEAAGTVLAGGLSLLGISAPEHL 370



 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 15/158 (9%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+ P  L    +
Sbjct: 21  ADLSRTVLHAVRRAVDEDALRAPVPARVRVERTRPGGSGDYACAVALQLAGPAALPAREV 80

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A L+  R+   P +  V I G GF+N  L         +S   +G    R ++ +G +  
Sbjct: 81  AALLRDRVAGTPGIGRVEITGPGFLNFTLD--------ASAGATGAACVRQVLEQGLRYG 132

Query: 125 IEFVSANPTGPMHVGH----CRCAVVGDTLASLMAFSG 158
                A   G +H  H     R AVV  T+  L+   G
Sbjct: 133 W---GAECAGQLHQLHHRREVRAAVVAGTVMKLLRAQG 167


>gi|76800033|ref|ZP_00781958.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Streptococcus agalactiae 18RS21]
 gi|76584650|gb|EAO61447.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Streptococcus agalactiae 18RS21]
          Length = 244

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 3/129 (2%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIE 111
           +++ L   P  IA  I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  
Sbjct: 1   MAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSA 58

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           Y    IG+G  V I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G
Sbjct: 59  YATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWG 118

Query: 172 AQINTLALS 180
            Q   L ++
Sbjct: 119 KQFGMLIVA 127


>gi|289449921|ref|YP_003475106.1| arginine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184468|gb|ADC90893.1| arginine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 578

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 220/581 (37%), Gaps = 113/581 (19%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119
           P+   EL        P++  +   G G++N +L+  SY+++ +  ++             
Sbjct: 55  PVIATELAGGIAGKLPELTEIRQTG-GYLNFFLNRSSYIKETIGKVLTDPHAVFPTADLH 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V +EF S N   P H+GH    ++G  +A++   +GY V +  ++ D G Q   L +
Sbjct: 114 DKTVLVEFSSPNIAKPFHIGHAFTTILGQVIANMYQTAGYNVVKLNHLGDYGTQFGKLIV 173

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNF-------PEEKW 229
           +   W   +AL  +    P      +Y+K     KE  +  +     F       PEEK 
Sbjct: 174 AYRLWGDAKALETD----PIKELLRIYVKFHKEAKEKPELENQARFAFKCLEEGRPEEK- 228

Query: 230 LPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGY 285
                     AM +  RD  L   N  +D    + D + G+      I  +++ L ++G 
Sbjct: 229 ----------AMWQKFRDLSLVEFNRVYDRLGIKFDNYNGESFYSDKIPAVVEMLRQKGL 278

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLA--- 339
           + E       S   Q   +             DD+  P   +LKSDG+  Y + DLA   
Sbjct: 279 MVE-------SDGAQVVQL-------------DDLKLPPCIILKSDGTTIYASRDLAAIL 318

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL-LCELVRLYRDGMPI 398
           Y    +   F   IYV+G+  + + +++ AV      KKA  +    CE V       P 
Sbjct: 319 YRDATWH--FYKNIYVVGTPQALHFRQVFAVL-----KKAGYDCADRCEHVGFGLVKFPE 371

Query: 399 -KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN--------SELLDFDFCK-------- 441
            KMS R GD I L  ++ E  + +   +   RKN        SE    D  +        
Sbjct: 372 GKMSTREGDVIFLEDLLSEAVAKTFEII---RKNAAERYEDMSEAEQADIAEKVGLGAVT 428

Query: 442 ---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
              ++   + + VF              Y+QY YAR  S+ R+A  +             
Sbjct: 429 YAFLRNGRERDIVFSWEEMLNFEGDTAPYLQYTYARAHSMLRKAGVVNAKEQL----LAA 484

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +   S  + SE  L   +        NA    EP  LA  +  +A  F+  ++   E P 
Sbjct: 485 VAAGSLNEESEFNLCRQIEALAAAFNNALKNNEPSILAKQINAVAHAFNKFYT---ECPI 541

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L+       +L   RL L  A    +  GL+I+ ++    M
Sbjct: 542 LK----AEGELRTSRLALAMATCFALKQGLSILNIQVVERM 578


>gi|254387532|ref|ZP_05002771.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294815080|ref|ZP_06773723.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326443443|ref|ZP_08218177.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197701258|gb|EDY47070.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294327679|gb|EFG09322.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 335

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           +E  + D + +ERPR    G  +T  A+ L+ P G  P  +AE++  RI   P + +V I
Sbjct: 23  LEVPVPDTVTVERPRPGGRGDWATTIALRLAGPAGKAPRAVAEILRERIAGTPGIAAVEI 82

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            G GF+NL L       ++  ++  G  YG  + G
Sbjct: 83  TGPGFLNLSLVDGSQAALVRRVLEQGPAYGHRVTG 117



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q + NP+F V+YA+AR R++ R A      L F   P   +      DT+   LI    +
Sbjct: 213 QHESNPLFTVRYAHARSRALTRNAA----ALGFRGEPLEHV------DTALDGLI---GD 259

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMRL 560
           YP V+ +A     P +LA +L   A       H     G E P      A +R     RL
Sbjct: 260 YPDVLASAARLHAPDRLARHLEATADALLAFQHTVLPRGEEKP-----SAAHRS----RL 310

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A  +++  GL+++GV +P+ +
Sbjct: 311 ALAEAAGTVLAGGLSLLGVSAPDHL 335


>gi|260061933|ref|YP_003195013.1| arginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88786067|gb|EAR17236.1| arginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 594

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 23/145 (15%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q    P  ++QY YAR RSI R+A D +   D DL   ++  +E        QL+  L E
Sbjct: 469 QGNTGP--FIQYTYARIRSILRKAGDGYAVPDKDLLSLSLHEKEK-------QLLKDLLE 519

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRL 560
           +P V+  A     P  +A Y YDL   F+  +      G E+     V  N       R+
Sbjct: 520 FPEVVLQAAEQYSPALVANYTYDLVKNFNSLYQQVSILGEEDA----VHRN------FRV 569

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           QL   V  ++  G  ++G+E P  M
Sbjct: 570 QLTGEVGRVVARGCKLLGIEVPERM 594



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           R +  +P  I E I A +  + +  S +   KGF+NL +  ++  +  + +     +YG 
Sbjct: 48  RQVKGNPAAIGEAIGAYLAENLEEVSGYNVIKGFLNLVIDDAWYLEFFTRMRADA-DYGL 106

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +   +   + +E+ S N   P+H+GH R  ++G +++ ++  +GY+V +   IND G  I
Sbjct: 107 HTGARRGSILVEYSSPNTNKPLHLGHIRNNLLGYSVSEILKAAGYKVYKTQIINDRGIHI 166


>gi|207111174|ref|ZP_03245336.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 62

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 42/61 (68%)

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           AG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++Y+ YA +R  +
Sbjct: 2   AGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIYYIHYANSRIHT 61

Query: 464 I 464
           +
Sbjct: 62  M 62


>gi|167957303|ref|ZP_02544377.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 371

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 54/290 (18%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378
           D  +LKSDG+  Y   D+A  K K  R   D + +V+G + S  +K++ A+   +   K 
Sbjct: 101 DTIVLKSDGTSLYITQDIALTKLKKNRFKADKLFWVIGPEQSLAMKQVFAICEQLGIGKL 160

Query: 379 AQINVLLCELVRLY--RDGMPIKMSKRAGDFITLRHVVDEV------------------- 417
           +    L   L+ +   + G   KMS R G+ + + +++DEV                   
Sbjct: 161 SDFTHLPYGLISIVDKQTGAKKKMSSRDGNTLYIDNLLDEVRDSLLNSGRDYDEKTADLI 220

Query: 418 GSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             D+V+F +L   R +  +LD    +     K +   Y+ Y  +R  S+  +      DL
Sbjct: 221 AIDAVKFAVLKPSRNSDSVLDI---QESINLKGDSGIYILYTLSRINSLLSKYT---GDL 274

Query: 476 DFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                    +PQ  E   S  E ++++ +A +P+ I +A  +  P  L  Y+ D+A VF+
Sbjct: 275 --------TLPQSEELALSSEERKIVMLMAYFPKRITDALESYAPNILIEYILDIAHVFN 326

Query: 534 GHWSHGRENPRLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
             ++      + +F+    AN RK    +L L  ++A +I + L ++G++
Sbjct: 327 SIYA------KEQFISEDVANTRK----KLYLSKSIAIVITNALKLLGIK 366


>gi|328479565|gb|EGF48791.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 131

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 87  GFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           G++N YL   S+  ++L +IV SG  +G   +G+G  V I+  S N   PM +GH R  V
Sbjct: 10  GYVNFYLDKISFAHEVLKAIVQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTV 68

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           +G+ LA+++   GY   +  ++ D G Q   L ++
Sbjct: 69  IGNALANILQKVGYSPIKINHLGDWGTQFGKLIVA 103


>gi|255036439|ref|YP_003087060.1| arginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949195|gb|ACT93895.1| arginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 592

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 15  LKEIDCKIKVEK--KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           LKE D +  V+K  ++  + VI +P         T     L++     P  I ++I   +
Sbjct: 7   LKE-DIQKAVQKHFQLESQEVILQPTKKEFEGFYTFVTFPLTKAARKAPAEIGQIIGDEL 65

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
                + + F   +GF+N+ L  S    +   I  S   +G  L   G  V +EF S N 
Sbjct: 66  VASSSLVAGFNVVQGFLNISLKDSTWLDLFGGIH-SDEAFG-TLPSNGKSVMVEFSSPNT 123

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             P+H+GH R   +GD+L+ ++  SGY+V +   +ND G  I
Sbjct: 124 NKPLHLGHLRNNFLGDSLSKILKASGYDVVKTCLVNDRGIHI 165



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 23/138 (16%)

Query: 453 YVQYAYARCRSIFRQAKDI-----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ++QY YAR RSI R+A+        P +++ +              +E +L+  L++YP 
Sbjct: 473 FIQYTYARIRSIMRKAEQAGIAAEVPGVNYAM------------HQAERELVFSLSQYPV 520

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A     P  ++ Y ++LA V++  ++       +      + +   +R+ L  AVA
Sbjct: 521 KVLAAANEFAPSLISQYAFELAKVYNQFYAE------VSIFSDPDPEAVKLRVALSSAVA 574

Query: 568 SIINSGLNIIGVESPNEM 585
             I   L ++G++ P  M
Sbjct: 575 ETIRKALGLLGIDVPERM 592


>gi|301608810|ref|XP_002933968.1| PREDICTED: LOW QUALITY PROTEIN: probable arginyl-tRNA synthetase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 573

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 123/539 (22%), Positives = 197/539 (36%), Gaps = 114/539 (21%)

Query: 99  RKILSSIVVSGIEYGRN---LIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           R +L  I   G  YG N     G  G K  +E+ S N     HVGH R  ++G+ +A+L 
Sbjct: 97  RTVLQQISKDGSIYGLNTELFSGLSGRKTVVEYSSPNIAKKFHVGHLRSTIIGNFIANLK 156

Query: 155 AFSGYEVTREYYINDAGAQINTL--ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
              G EV R  Y+ D G Q   L    S F   ++ + N     P  +   VY+K     
Sbjct: 157 QAVGNEVIRINYLGDWGLQFGLLGAGFSKFGSEEELVVN-----PLQHLFEVYVKVNTAA 211

Query: 213 LADK----YSSELLNFPE-------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             DK     + E L   E         W+   +D S+Q   K+     K L    D +  
Sbjct: 212 EEDKDIKLSAQEFLRRLEGGDPHALSLWMHF-RDLSIQEYAKV----YKRLGAHFDDYSG 266

Query: 262 EDDFHRGDPSPIRDIIDNLARQG-----YVYEGILPPPKSKTT--QKCDMDRKQLLFRST 314
           E  +       ++ +  N   Q      +++       K+ TT  QKC      L+FR  
Sbjct: 267 ESFYKEKSQEVLKQLESNGLLQKTEXGLFIWLKTFANVKTYTTCFQKC----LSLIFR-- 320

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
                                 D+A    + ER  FD MIYV       + ++L  +   
Sbjct: 321 ----------------------DVAAALDRLERYSFDEMIYVTDKSQKNHFQQLFKILKI 358

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           + + +A       +  +    G+   M  R G+ + L  V+DE  S  ++ M     + +
Sbjct: 359 LGKDQA-------DRFQHVPFGLVKGMKTRRGEVVFLEDVLDEARSRMLQNMAASGTSKQ 411

Query: 434 LLD---------------------------FDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           L D                           FD+ +  + + +  VF +QY +AR  S+  
Sbjct: 412 LEDPSDTAEKIGIAALIVQDFKGQLLSDYHFDWDQALQSTGDTGVF-LQYTHARLHSL-- 468

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           QA     D D        I   S  +   +  + HL  Y  VI       +P  L  YL 
Sbjct: 469 QALWCSRDTD-------DIDIASLREPCVIATLQHLLRYDEVIYKCLEDLQPRYLVTYLM 521

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L     GH ++     R   V+ ++ +    RL   + V  +++SG+ ++G+   N M
Sbjct: 522 SL-----GHLANVAH--RALHVKRSSSEAAHARLFFFNNVRMVLSSGMKLLGISPVNNM 573


>gi|551762|gb|AAA72384.1| arginyl-tRNA synthetase [Buchnera aphidicola]
          Length = 158

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           GH   N  + ++    L P  +A  I+  IK       +  +  GFIN  ++P ++ + L
Sbjct: 36  GHYQLNNLIKIANISNLKPFELANRIILNIKKKYMYKEITFSQPGFINFLINPYWISEQL 95

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             I +S    G N +     + I++ S N    MH+GH R  ++GD +A ++ F G+ V 
Sbjct: 96  EKIFLSP-RLGINHV-NAQNIVIDYSSPNIAKEMHIGHLRSTIIGDVMARILDFLGHNVI 153

Query: 163 REYYI 167
           R  +I
Sbjct: 154 RANHI 158


>gi|332521375|ref|ZP_08397831.1| arginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332043103|gb|EGI79301.1| arginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 595

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 12/133 (9%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR +SI R+AK             N I    +    E  LI  L  +P VI+NA
Sbjct: 475 FIQYTYARIQSILRKAKA------NGTVSLNAIESSFKLHEKEKTLIKQLQVFPEVIQNA 528

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y Y+L   F+  + +      +  + A+N+     R+QL  AV++ I +
Sbjct: 529 AENHSPALVANYTYELVKDFNSFYQN------VSILGADNQTDKNFRIQLSQAVSNTIKN 582

Query: 573 GLNIIGVESPNEM 585
              ++G+  P  M
Sbjct: 583 AFILLGITVPERM 595



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           R +  +P+ I E I   +  + +V   F   KGF+N+ +  +Y     + I     ++G 
Sbjct: 48  RVVKGNPVQIGETIGQYLIENVEVVKAFNVVKGFLNIEIEDAYYISFFNEIKADN-KFGY 106

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
                 + V +E+ S N   P+H+GH R  ++G +++ ++  SG +V +   IND G  I
Sbjct: 107 KTPDSTSAVMVEYSSPNTNKPLHLGHVRNVLLGYSVSEIIKASGKKVYKTQIINDRGIHI 166


>gi|156741625|ref|YP_001431754.1| arginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156232953|gb|ABU57736.1| arginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 640

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 48/292 (16%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           L +SD    Y   DLA    + ER F    +IYV+ S    + ++L A+A A+   + + 
Sbjct: 367 LRRSDSGTLYHTRDLACIVYR-EREFRPAKIIYVVDSRQELHFRQLFALARAMGYAQ-ET 424

Query: 382 NVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
            ++  +   ++ + G P  +S RAG+ + L  ++DE                        
Sbjct: 425 ELIHVKFGTIFDQQGRP--LSTRAGNMVYLADLLDEAHARARAVVDQASPELPEVEKEAI 482

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V +  L++     +  D+ ++    + N   Y+QY +ARC SI R+A D   
Sbjct: 483 AEAVGVGAVVYNDLYQDPRRDIRLDWERML-AIEGNSAPYIQYMHARCCSILRKAADEGV 541

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D +         P E+        +I  LA+ P  +  A     P+ +A + Y+ A    
Sbjct: 542 DAEQGDAALLTHPAET-------AVIKQLAKLPGAVREAGERYAPFVIAEWCYETARALS 594

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +           ++A    L   RL+LV A A  + +GL ++G+++P  M
Sbjct: 595 AFYRD------CSVLKAETPALRTARLRLVAATAQALRNGLALLGIKAPERM 640



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 82  FIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
            +A   F+N  L  + L   +L  +   G  YG +  G G  + I++ S N    MHVGH
Sbjct: 104 IVATGPFVNFSLDAARLAAAVLDEVERLGARYGSDDQGAGKTIVIDYSSPNVAKTMHVGH 163

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFW 183
            R  ++G +L  +  F GY V  + ++ D G Q    +A  V W
Sbjct: 164 IRSTIIGQSLYHIFDFLGYRVIGDNHLGDWGKQFGMNIAAIVRW 207


>gi|124002391|ref|ZP_01687244.1| arginyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992220|gb|EAY31588.1| arginyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 701

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 121/309 (39%), Gaps = 66/309 (21%)

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
           D D+ LL+S+G+  Y   DL     KYE    +  IYV+G++   + K L  +       
Sbjct: 417 DNDKILLRSNGTSVYMTQDLGTADKKYEDHTINKSIYVIGNEQDYHCKVLFQI------- 469

Query: 378 KAQINVLLCELVRLYRDGM----------PI-KMSKRAGDFI-----------TLRHVVD 415
                  L +L R Y DG+          P  KM  R G  I           T R   D
Sbjct: 470 -------LKDLDRPYADGLYHLSYGMVDLPTGKMKSREGTVIDADDLLAEVKETARKRTD 522

Query: 416 EVG-----SDS-----VRFMMLWRKNSELLDFDFCKVKEQSKENPVFY-------VQYAY 458
           ++G     SD+      R + L      LL  D  K     KE+ V +       VQ  Y
Sbjct: 523 DLGKLDGMSDAEKIEIYRIIALGALKYTLLRVDPKKRMLFDKESSVDFQGDAGPFVQMNY 582

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R RSI R+A ++    +    P  V    S+    E +LI  L +Y  V+E A     P
Sbjct: 583 VRTRSILRKAAEMGISTNE---PWTV----SDLHAMEKELIKLLLQYEAVVEEAGNEYNP 635

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT--MMRLQLVHAVASIINSGLNI 576
             +A Y YDLA  +   ++   E P L+    +   +     R+ L      +I   L +
Sbjct: 636 SFVAQYAYDLARTYSQFFA---ECPILKMDDGSAASIERRKFRIALSTKTGELIKKALGL 692

Query: 577 IGVESPNEM 585
           +G+E P  M
Sbjct: 693 LGIEVPERM 701



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           +A KGF+N+ ++         +I  S  +YG+ L  K  KV +E+ S N   P+H+GH R
Sbjct: 75  VANKGFLNISIANKVWIDTFGNIAQSS-DYGK-LPHKNQKVMVEYSSPNTNKPLHLGHLR 132

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              +G ++A ++  +GY+V +   +ND G  I
Sbjct: 133 NNFLGYSVARILEAAGYDVVKANLVNDRGVHI 164


>gi|150025554|ref|YP_001296380.1| arginyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166232786|sp|A6GZP8|SYR_FLAPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149772095|emb|CAL43571.1| Arginine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 601

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 453 YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           ++QY YAR +SI R+A  DI   +   L P+            E +LI  +  YP VI++
Sbjct: 486 FIQYTYARIQSILRKANFDITVTISTKLHPK------------EKELIKQIEMYPEVIQH 533

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P  +A Y+YDL   ++  +    +   +   + N++K+   R+QL   VA  I 
Sbjct: 534 AAANHSPALIANYIYDLVKEYNSFY----QTVSILGEEDNDKKV--FRVQLSKKVADTIK 587

Query: 572 SGLNIIGVESPNEM 585
           +   ++G++ P  M
Sbjct: 588 TAFTLLGIDVPERM 601



 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 87  GFINLYLSPSYLRKILSSI-------VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           GF+N+ ++  Y     ++I        VS  E+ + ++       +E+ S N   P+H+G
Sbjct: 90  GFLNIVIANDYYINFFNTIKTDAQFGFVSPSEHDKAIM-------VEYSSPNTNKPLHLG 142

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           H R  ++G ++A ++  SG +V +   IND G  I
Sbjct: 143 HVRNNLLGYSVAEIIKASGKKVYKTQIINDRGIHI 177


>gi|120437133|ref|YP_862819.1| arginyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579283|emb|CAL67752.1| arginyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 623

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR +SI R+A       +FD      + +E  F   E +LI  +  +P  I  A
Sbjct: 506 FIQYTYARIQSILRKA-------EFDTSAE--LSKEFSFHEKEKELIKQVQLFPETIALA 556

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y Y+L   F+  + +      ++ +  ++    + R+QL   VA++I S
Sbjct: 557 AENHSPALIANYTYELVKSFNSFYQN------VQILGIDDEAEKVFRVQLSGLVANVIKS 610

Query: 573 GLNIIGVESPNEM 585
           G  ++G+E P  M
Sbjct: 611 GFKLLGIEVPERM 623



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 2/121 (1%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           + L   P  +AE I   ++ + +  + F   +GF+N+ +S  Y     +  V    ++G 
Sbjct: 79  KQLRTSPAQLAEKIGKYLEDEVEEVASFNVIQGFLNIVISDQYYINFFND-VKDREDFGI 137

Query: 115 NL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            L     + + +E+ S N   P+H+GH R  ++G +++ ++  +G EV +   IND G  
Sbjct: 138 LLPQSDASGIMVEYSSPNTNKPLHLGHIRNNLLGYSVSEILKAAGNEVYKVQVINDRGIH 197

Query: 174 I 174
           I
Sbjct: 198 I 198


>gi|300175973|emb|CBK22190.2| unnamed protein product [Blastocystis hominis]
          Length = 449

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 106/483 (21%), Positives = 192/483 (39%), Gaps = 81/483 (16%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MHVGH R  ++GD L+ ++ +  ++V R  +I D G Q   L            Y  + +
Sbjct: 1   MHVGHLRSTLLGDCLSRVLEYCKHDVIRINHIGDWGTQFGMLLC----------YLKEIN 50

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
              G    +      ++L   Y +  + F E+   P  + +S Q ++ + + +   L++ 
Sbjct: 51  SSNGNSLSI------EDLTALYRAAKVRFDED---PTFRLHSHQEVVNLQKGEPWELSVW 101

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---- 311
             +       ++     +  I   L  QG  +     P   K     +++ K LL     
Sbjct: 102 KQLCALSCQMYQTIYQRL-GIDPRLKTQGESFYNPFLPELVK-----ELESKNLLTDQEG 155

Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRL- 367
              M   + D PL+  K DG + Y + DL   K +      D +IYV+ S  S + ++L 
Sbjct: 156 SKVMFVPNFDVPLIIQKKDGGFGYDSTDLMALKYRTLVTKADWIIYVVDSGQSLHFQQLF 215

Query: 368 EAVAAAVSEKKAQINVLLCELVR-------LYRDGMPIKMS-------KRAGDFITLR-- 411
           EA   A   +K +++ +   LV+         R G  ++++       +RA   +  R  
Sbjct: 216 EAGRKAGWAQKTRLDHVAFGLVQGKDKKKFKTRSGKNVRLTDLLDEACERATAILRQRVE 275

Query: 412 -------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV-FYVQYA 457
                            ++G   V++  L  + + L D+ F   +  S E     Y+QY 
Sbjct: 276 SGLSNLSEEEAIVQTATQLGIGGVKYFDL--RQNRLSDYVFSFDRMLSPEGDTNVYLQYT 333

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +ARC SI R+A     ++D + F        S    SE  L   +  +   +E       
Sbjct: 334 HARCMSILRKA-----NMDLNGFRE--CGNISLSHRSEWSLACSILRFNDAVEKVAKDLM 386

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  L  YLYDL    +  +   R+   +   + N+R L +M      A   ++  GLN++
Sbjct: 387 PNVLCKYLYDLCISLNAFY---RDCRVIGTPEQNSRLLLIM------AAEKVMRQGLNLL 437

Query: 578 GVE 580
           G++
Sbjct: 438 GID 440


>gi|118381734|ref|XP_001024027.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89305794|gb|EAS03782.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 616

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
           D  ++ + +  +GF+ + L    +   +++I+ +G+ Y      K  K+ ++F S N   
Sbjct: 91  DCAIEKLGVTDQGFLTIKLKQQVIEDEINNILKNGLNYPTE---KKQKIAVDFSSPNIAK 147

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
            MHVGH R  ++G+++  +  F  +EV R  ++ D G Q   L   +  +Y
Sbjct: 148 EMHVGHLRSTIIGESICRIFEFQNHEVLRINHLGDWGTQFGMLITYMKRKY 198


>gi|289806421|ref|ZP_06537050.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 229

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 17/177 (9%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           L  + + VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A 
Sbjct: 69  LEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA- 126

Query: 470 DIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               D+D   L    VI  E      E QL   L ++   +        P+ +  YLYD+
Sbjct: 127 ----DIDEQALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDV 178

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +F G + H         + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 179 AGLFSGFYEH------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 229


>gi|195036802|ref|XP_001989857.1| GH18567 [Drosophila grimshawi]
 gi|193894053|gb|EDV92919.1| GH18567 [Drosophila grimshawi]
          Length = 571

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +EF S N   P HVGH R  ++G+ LA+L    GY  TR  Y+ D G Q   LAL V
Sbjct: 114 RIVVEFSSPNIAKPFHVGHLRSTIIGNVLANLHKHLGYRTTRLNYLGDWGTQFGLLALGV 173



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 45/302 (14%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
           R  +V D    P++KSDGS  Y A D+A    + +R  F  M+YV+ +  + +   L   
Sbjct: 287 REIVVVDQRRVPVIKSDGSTLYLARDIAALLERQQRLQFSRMLYVVDNGQADHFNALFQT 346

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---VGSDSVRFMML 427
           AA + ++       L + ++  + G    MS R G+ I L  V++E   V  +       
Sbjct: 347 AAKLDKR-------LTDKLQHVKFGRIHGMSTRQGNAIFLSDVLNEARDVMREKRSNSST 399

Query: 428 WRKNSELLDFDFCKV-----------KEQSKENPVFYVQYA------------YARCRSI 464
            + N  L D + C +           K++ + +  F  Q A            Y  CR  
Sbjct: 400 TKVNVALNDDELCDILGVSAVLVNVLKQRRQRDHEFSWQQALQVNGDTGIKLQYTHCR-- 457

Query: 465 FRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                D F  ++  ++ P       +E  +  + L+  LA + + +  A    E   L  
Sbjct: 458 LHSLLDNFRHIELAEIKPS--WQHLTEEPSDAIDLLYELARFEQCVWQAKEQLEACVLVN 515

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL+ L +      +  R   RL   Q    +    RL L HA    +  G+ ++G++  +
Sbjct: 516 YLFGLCN------ATSRALKRLPVKQEKCLQKQTQRLLLFHAAKRTLQQGMQLLGLKPLD 569

Query: 584 EM 585
           +M
Sbjct: 570 QM 571


>gi|189502012|ref|YP_001957729.1| arginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|238692307|sp|B3ERZ8|SYR_AMOA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189497453|gb|ACE06000.1| hypothetical protein Aasi_0599 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 596

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/297 (20%), Positives = 128/297 (43%), Gaps = 49/297 (16%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           ++ LL++DG+  Y   DL     +Y+    N ++YV+G++   + + L  + A +    A
Sbjct: 317 EKLLLRADGTSVYITQDLGTADLRYQDFKPNKLVYVVGNEQDYHFEVLAKIMARLGRPYA 376

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
                L  L     D    KM  R G  +    ++DE                       
Sbjct: 377 ---TDLYHLSYGMVDLPTGKMKSREGTVVDADMLIDEMIETAEEHTRELGKIDGFSKEEA 433

Query: 417 ------VGSDSVRFMMLWRKNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                 +   ++++ +L     + L FD    +  Q    P  ++QY +AR  ++ R+ +
Sbjct: 434 KDLYHILAMGALKYFLLRVDAKKRLLFDPQASIDFQGDTGP--FIQYTHARIAAVLRKVQ 491

Query: 470 DIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               D+ F+    +++ QE+      E ++IV LA +P+ ++ + +A  P  LA ++ ++
Sbjct: 492 Q--ADIAFN----DIVEQENFVLHPLEREVIVELAAFPKKLQESALAYAPAILAQHVLEI 545

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  ++      R    L  +   + K+ + R+QL   VA +I + ++++G+  P  M
Sbjct: 546 AKAYN------RMYAELSILHEQDTKVQLFRIQLSVLVAQVIKTVMHLLGIVVPERM 596



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%)

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  IA  I   ++ +    + +   KGF+NL +  +      + +  +   +G  L  
Sbjct: 54  VSPEVIANKIGDWMQTNTQAIASYNVVKGFLNLSIKDTIWLASFNQMYQNK-HFGY-LPS 111

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              K+ +E+ S N   P+H+GH R   +G  ++ ++  +GYEV +   +ND G  I
Sbjct: 112 NRQKIVVEYSSPNTNKPLHLGHLRNNFLGHAVSEILQAAGYEVYKVNLVNDRGIHI 167


>gi|289672019|ref|ZP_06492909.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 270

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 30/183 (16%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 111 LRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKLG 169

Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
             F     D     ++   PQE E       L   LA++   + N      P+ L  YLY
Sbjct: 170 SAF-----DASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLY 217

Query: 527 DLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           DLA +F   + +    G ENP  +            RL+L       +  GL+++G+E+ 
Sbjct: 218 DLAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETL 267

Query: 583 NEM 585
             M
Sbjct: 268 ERM 270


>gi|255016789|ref|ZP_05288915.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 108

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80
           + +E+  +  I++E P+D  HG  STN AM L+R     P  IAE IV  +K D   +  
Sbjct: 23  VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIV 106
           V IAG GFIN YL  +YL  ++  I+
Sbjct: 83  VEIAGPGFINFYLDNAYLTDLVPVIL 108


>gi|240275922|gb|EER39435.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 898

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116
           G  P  +   IV  +     + +  ++G   I  Y  P  L K ++SSI+ +   YG N 
Sbjct: 82  GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 140

Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y
Sbjct: 141 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 200

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           + D G Q   LA      Y++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 201 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 246


>gi|325093284|gb|EGC46594.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 1295

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116
           G  P  +   IV  +     + +  ++G   I  Y  P  L K ++SSI+ +   YG N 
Sbjct: 479 GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 537

Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y
Sbjct: 538 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 597

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           + D G Q   LA      Y++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 598 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 643


>gi|258648951|ref|ZP_05736420.1| arginine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850551|gb|EEX70420.1| arginine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 642

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 57/307 (18%)

Query: 315 MVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +  D +D+ LL ++DG+  Y   D+     ++ +   D MIYV+G++   + K L  +  
Sbjct: 357 LAADGLDQKLLLRADGTSVYMTQDIGTATQRFNDYDIDKMIYVVGNEQDYHFKVLSLLLD 416

Query: 373 AVSEKKAQINVLLC-ELVRL------YRDGMPI-------KMSKRAGDFITL-------- 410
            +  K  +  V     +V L       R+G  +        M   A + I          
Sbjct: 417 KLGFKWGKELVHFSYGMVELPNGKMKSREGTVVDADDLIAAMQDEAAETIEAAGKFEDRP 476

Query: 411 ----RHVVDEVGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458
               + V   VG  ++++ +L    RKN      E +DF+          N   ++QY Y
Sbjct: 477 AEEKQEVARIVGLGALKYFLLKVDARKNMVFNPEESIDFN---------GNTGPFIQYTY 527

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR RS+ R+A++    +   L         ++    E  ++  LAE+P ++  A     P
Sbjct: 528 ARIRSVIRKAEEGGISIPATL------AAGAKLSDKEESIVQRLAEFPAIVRQAGAEYAP 581

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y YDL   ++  +           ++  + +    RL L   VA +I +G++++G
Sbjct: 582 NAIANYCYDLVKEYNQFYHD------FSILREADEEKKRFRLVLSANVAKVIRTGMSLLG 635

Query: 579 VESPNEM 585
           +E P  M
Sbjct: 636 IEVPERM 642



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 2/115 (1%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGK 119
           P   A+ I A +K   +V + F   KGF+NL +  +     L+ I  +   YG + +   
Sbjct: 93  PEETAQEIGAYLKEHSNVVADFNVVKGFLNLCIDSAAWIDTLNDIHTAE-NYGLQPVTAD 151

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              V IEF S N   P+H+GH R  ++G +LA ++  +G  V +   +ND G  I
Sbjct: 152 APLVMIEFSSPNTNKPLHLGHVRNNLLGWSLAKILEANGNRVVKTNIVNDRGIHI 206


>gi|225563328|gb|EEH11607.1| arginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1042

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116
           G  P  +   IV  +     + +  ++G   I  Y  P  L K ++SSI+ +   YG N 
Sbjct: 479 GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 537

Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y
Sbjct: 538 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 597

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           + D G Q   LA      Y++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 598 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 643


>gi|154281911|ref|XP_001541768.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150411947|gb|EDN07335.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 517

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116
           G  P  +   IV  +     + +  ++G   I  Y  P  L K ++SSI+ +   YG N 
Sbjct: 82  GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 140

Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y
Sbjct: 141 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 200

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           + D G Q   LA      Y++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 201 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 246


>gi|149921434|ref|ZP_01909887.1| hypothetical protein PPSIR1_26758 [Plesiocystis pacifica SIR-1]
 gi|149817754|gb|EDM77219.1| hypothetical protein PPSIR1_26758 [Plesiocystis pacifica SIR-1]
          Length = 619

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 64/304 (21%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           L KSDG+  Y   DLA  + K+E  G D  IYV+ +  S + +++      +   +AQ  
Sbjct: 326 LRKSDGTGLYATKDLALARMKFEEYGVDRSIYVVDARQSDHFRQVFLTLKKMGFDQAQ-- 383

Query: 383 VLLCELVRLYRDGMP-IKMSKRAGDFITLRHV---------------------------- 413
             LCE V      +P   MS R G+ I  R +                            
Sbjct: 384 --LCEHVAYEMVELPDGAMSSRKGNVILFRALREQLAAALESSHFEGIRSNPDMLAEWGA 441

Query: 414 ------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                       +++V   ++++ ML R N++ + FD  K    +  +    +QY  AR 
Sbjct: 442 DEASANAAMAKAIEDVSLGAIKYGMLARDNNQKIVFDMDKWTMVAGGDGGAALQYVTARS 501

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYK 520
            S+ R+   I   LD  L       +     + +E  L+  L   P  + +A+    P  
Sbjct: 502 ASLLRKNAAIGKTLDPALLEDGATLEPGTLTEPAERGLMQELINLPGTVAHASKLLRPSL 561

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK-----LTMMRLQLVHAVASIINSGLN 575
           L   LY ++  ++            RF Q  N K     L   RL LV A    ++ GL+
Sbjct: 562 LCAQLYAISRAYN------------RFQQTCNVKNQEGGLLQSRLLLVQATREALSWGLS 609

Query: 576 IIGV 579
           ++G+
Sbjct: 610 LLGI 613



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 88  FINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           ++NL L+P     +L      G   +Y         KV +EF   N     HVGH R   
Sbjct: 91  YLNLRLNPHRTGALLLPAWARGERPDYAGTAAHGDAKVMVEFSQPNTHKGFHVGHMRNLC 150

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +GD L  L+  +G EV    Y+ D G  +
Sbjct: 151 LGDALVRLLRATGNEVVAANYLGDVGTHV 179


>gi|255070885|ref|XP_002507524.1| arginyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226522799|gb|ACO68782.1| arginyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 646

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 207/530 (39%), Gaps = 97/530 (18%)

Query: 60  DPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRK-ILSSIVVSGIEY-- 112
           +P ++AE IV  I   P  + +F    +AG GF+N+  S S+L   +L ++V S  E   
Sbjct: 123 NPRSLAEAIVEAI---PGREHLFAQTSVAGPGFVNVTFSASFLAAGVLDTVVNSTDEKIR 179

Query: 113 ---GRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
               RN+ I K   V+    +      MHVGH R  ++G+T+   +   G E  R  ++ 
Sbjct: 180 IPPQRNMSIPKRAVVDYSSPNIAKASEMHVGHLRSTIIGETICRALESFGVETVRLNHVG 239

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L L+     Q       +DL E Y        V K          L F ++ 
Sbjct: 240 DWGTQFGML-LTHLHDMQMGSDFAITDLQEFY-------KVAK----------LRFDKD- 280

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE-DDFHRGDPSPIRDIID--NLARQGY 285
                 D+  +A   ++R  L+A ++Q      E  +  R D   I  ++D   + R   
Sbjct: 281 -----DDFKARAQSAVVR--LQAGDVQMRKLWEEICEISRRDFEEIYRVLDISIIERGES 333

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADL-AYFK 342
            Y  I+P    +  +K      Q      + G+    PL+  KSDG + Y + DL A ++
Sbjct: 334 FYNEIIPLVLDELVKKGIAVEDQGAL--CIFGNLESTPLICRKSDGGFNYASTDLAALWQ 391

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-----EKKAQINVLLCEL---VRLYRD 394
              +   D +IYV      G  K  EA+  A +     +KK    + L  +   + +  D
Sbjct: 392 RTTQLEADQIIYVT---DVGQSKHFEAIFDAANRAGWLDKKDNTKIRLDHVGFGLVMGED 448

Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMML 427
           G   +   R+G  + LR ++ E                           +G  +V++  L
Sbjct: 449 GK--RFRTRSGGTVPLRSLLSEAQSRCLESLQTRSSDLDDKELLEASHIMGIAAVKYADL 506

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
               S    F + ++ +  K N   Y+ Y +AR  ++  +A+D   DL       +   Q
Sbjct: 507 HNNRSTNYVFSYDRMLDM-KGNTAVYLLYTHARISTLLSRAED--QDLT------SPAHQ 557

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
               D  E  L V + + P  +        P +L  Y Y L   ++  +S
Sbjct: 558 MVFTDEKERALAVAILKLPDALRAVVQDLLPSRLCDYAYHLCVAYNEFYS 607


>gi|295135663|ref|YP_003586339.1| arginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983678|gb|ADF54143.1| arginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 599

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 15/133 (11%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY +AR +SI R+A       DF+    + +  E E    E +LI  +  YP  I+ A
Sbjct: 482 FIQYTHARIQSILRKA-------DFEY--ESQLVSEYELQNKEKELIKQIQLYPETIQLA 532

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y YDL   F+  + +      +  + A       +R QL   VA+II S
Sbjct: 533 AENHSPALIANYTYDLVKEFNSFYQN------VSILGAEKDMERQLRTQLSKMVANIIKS 586

Query: 573 GLNIIGVESPNEM 585
              ++G++ P+ M
Sbjct: 587 SFGLLGIQVPDRM 599



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG- 113
           R +  +P+ + E I   ++ +  + S F   KGF+N+ L+ +Y     + I  +  +YG 
Sbjct: 55  RQVKTNPVKLGEDIGKYLQENVTIVSRFNVVKGFLNILLNDAYYLDFFNEIK-NDPDYGF 113

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
              +    K+ +E+ S N   P+H+GH R  ++G ++A ++  +G EV +   IND G  
Sbjct: 114 VKELEDPRKIMVEYSSPNTNKPLHLGHIRNNLLGFSVAEILEAAGNEVYKTQIINDRGIH 173

Query: 174 I 174
           I
Sbjct: 174 I 174


>gi|156052483|ref|XP_001592168.1| arginyl-tRNA synthetase [Sclerotinia sclerotiorum 1980]
 gi|154704187|gb|EDO03926.1| arginyl-tRNA synthetase [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 686

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 13/142 (9%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYG 113
           R  G  P  +AE   A+    P V      G  ++  +     L ++L  +I+  G  +G
Sbjct: 127 RVKGKKPNELAEEWAAKYPESPLVHKPTTNGV-YLQFFFKADKLNELLIPTIIRQGSNFG 185

Query: 114 RN----LI-----GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
            N    L+      KG K + IEF S N   P H GH R  ++G  L++L A  G+ VTR
Sbjct: 186 ENKYLGLVDPEDPSKGQKKIVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAAVGWNVTR 245

Query: 164 EYYINDAGAQINTLALSVFWRY 185
             Y+ D G Q   LAL  F RY
Sbjct: 246 VNYLGDWGKQYGLLALG-FDRY 266



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 62/304 (20%)

Query: 316 VGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
           +G  + + ++K  DG+  Y   D++    + E+  FD MIYV+ +D   ++++L  +   
Sbjct: 408 IGKGLGKAIVKRRDGTALYLTRDISELLQRKEKYDFDQMIYVVATDQELHLQQLFKIIEL 467

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-- 431
           +  K+ +     C+ +     G+   MS R G    L  ++ +V       M   +KN  
Sbjct: 468 LGYKELRDK---CQHINF---GLVHGMSTRRGTVKFLDDILRDVAEKMHEVM---QKNEA 518

Query: 432 -----------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463
                      S++L      V++ S +                 +   Y+QYA+AR  S
Sbjct: 519 KYEQIADPLATSDILGISSVMVQDMSGKRVNGYTFNMDTMTSFEGDTGPYLQYAHARLCS 578

Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           I R+A    +     D  L            +     LI  L++YP V++N     EP  
Sbjct: 579 ITRKAALTAEEIASADLSLLT----------EIHAQNLIRTLSQYPDVVQNTVKTLEPTT 628

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ +  V    + H R       +  + +++   R+ L  A   ++ +G+ I+G+ 
Sbjct: 629 ILTYLFKMTHVLSSSYDHLR-------IMGSEKEVMKARMALYDAARVVLYNGMRILGL- 680

Query: 581 SPNE 584
           SP E
Sbjct: 681 SPVE 684


>gi|331009577|gb|EGH89633.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 259

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 30/185 (16%)

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           + LR +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+
Sbjct: 98  VELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRK 156

Query: 468 AKDIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                    FD     ++   PQE E       L   LA++   + N      P+ L  Y
Sbjct: 157 L-----GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAY 204

Query: 525 LYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LYDLA +F   + +    G ENP  +            RL+L       +  GL+++G+E
Sbjct: 205 LYDLAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLE 254

Query: 581 SPNEM 585
           +   M
Sbjct: 255 TLERM 259


>gi|310797950|gb|EFQ32843.1| arginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 633

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 70/308 (22%)

Query: 316 VGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EA 369
            G  ++RP++ K DG+  Y   D++    + ++  FD+MIYV+ S    ++K+L    E 
Sbjct: 356 AGKSLERPIIRKKDGTALYLTRDISELLHREKKYNFDHMIYVVASQQDLHLKQLFKIIEL 415

Query: 370 VAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           +    + KK Q IN            GM + MS R G    L  ++ +VG      M   
Sbjct: 416 MGYPETAKKCQHINF-----------GMVLGMSTRKGTVKFLDDILRDVGDKMHEVM--- 461

Query: 429 RKN-------------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAY 458
           +KN             +++L      V++ S +   N  F              Y+QYA+
Sbjct: 462 KKNETKYSQVENPEATADILGISSVMVQDMSGKRINNYKFDMDTMTSFEGDTGPYLQYAH 521

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQLIVHLAEYPRVIENATIAQ 516
           AR  SIFR+A    P+         V+  +    T +  ++LI  +++YP V++N     
Sbjct: 522 ARLCSIFRKAG--VPE-------EEVVKADLSLLTEKHAIELIRVVSQYPDVVQNTLKTL 572

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  YL+ L  V    +        LR V  +  ++   RL L  +  +++ +G+ +
Sbjct: 573 EPTTVLTYLFRLTHVVSSSYD------VLRIV-GSEPEIQKARLALYSSARTVLYNGMRL 625

Query: 577 IGVESPNE 584
           +G+ SP E
Sbjct: 626 LGL-SPVE 632



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ +EF S N   P H GH R  ++G  +A+L   +G++VTR  Y+ D G Q   LAL  
Sbjct: 154 KIIVEFSSPNIAKPFHAGHLRSTIIGGFIANLYDGAGWDVTRINYLGDWGKQYGLLALG- 212

Query: 182 FWRY 185
           F R+
Sbjct: 213 FERF 216


>gi|302542536|ref|ZP_07294878.1| arginine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302460154|gb|EFL23247.1| arginine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 358

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 41/181 (22%)

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G  +  R ++  +GSD+ R+ +L     +L D D   +  Q + NP+F V+YA+A     
Sbjct: 219 GAGVGARELLTRLGSDAARWGLLRAAAHDLPDLDPAHLLAQREGNPLFRVRYAHA----- 273

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                         L  R+V   E+E    +  L+  L ++PR +E+A   + P ++A +
Sbjct: 274 --------------LAKRSVGDAEAE-GADDSALLGLLGDFPRTVESAARHRAPDRVARH 318

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L   A                 F+    RK      +L  A   ++ +GL ++G+ +PN 
Sbjct: 319 LVATADA---------------FLPGTRRK------RLAEATRVVLANGLRLLGISAPNR 357

Query: 585 M 585
           +
Sbjct: 358 I 358


>gi|239982303|ref|ZP_04704827.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291454148|ref|ZP_06593538.1| arginyl tRNA synthetase [Streptomyces albus J1074]
 gi|291357097|gb|EFE83999.1| arginyl tRNA synthetase [Streptomyces albus J1074]
          Length = 324

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++      ++   + +R+V+ERP     G  ++N A+ L+R  G  P  +
Sbjct: 4   ADLSRAVLSAVRSAVDGGELAVAVPERVVVERPGPGGAGEWASNVALRLAREAGRPPREV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           AE++ +R+   P V  V + G GF+N+ L+   +  ++  I   G  YG
Sbjct: 64  AEVLRSRLVAAPGVAGVEVTGPGFLNVTLAGDSVGALVDRIAAEGEAYG 112



 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 14/117 (11%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D +R+ +L     +L      +V EQ   NP+F V+YAYAR R +      +     
Sbjct: 171 LGDDGLRWALLHPAPHDL--PHGAEVLEQRARNPLFRVRYAYARSRGLVAGGAAL----- 223

Query: 477 FDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                  ++P          +++   L E P V+  A     P +LA  L  LA  F
Sbjct: 224 ------GIVPGSGPVTGEAARVLTGLLGEQPAVLVAAARKGAPDRLARQLVTLADAF 274


>gi|299144758|ref|ZP_07037826.1| arginine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515249|gb|EFI39130.1| arginine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 694

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 124/303 (40%), Gaps = 68/303 (22%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+ DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  
Sbjct: 419 LLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSL 478

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V     +    +G   KM  R G  +    +++E                          
Sbjct: 479 VHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDI 535

Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
              VG  ++++ +L    RKN      E +DF+          N   ++QY YAR +S+ 
Sbjct: 536 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 586

Query: 466 RQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           R+A +   + P+          IP   E    E  LI  +A++  V++ A     P  +A
Sbjct: 587 RKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIA 637

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+N++G+E P
Sbjct: 638 NYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVP 691

Query: 583 NEM 585
           + M
Sbjct: 692 SRM 694



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I     +YG   + K 
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYG---LVKA 111

Query: 121 TK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           T+    V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I
Sbjct: 112 TETSPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHI 169


>gi|163786141|ref|ZP_02180589.1| arginyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878001|gb|EDP72057.1| arginyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 592

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 1/115 (0%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  I E I   ++ + D+   F   KGF+N+ +  SY      SI      YG   +  
Sbjct: 53  NPAVIGEQIGQYLQDNVDLIKGFNVVKGFLNIEIDDSYYLDFFQSIK-GKTNYGFANLKD 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I
Sbjct: 112 DKAVMVEYSSPNTNKPLHLGHVRNVLLGYSVAEILKASGKKVYKTQIINDRGIHI 166



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 14/133 (10%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR +SI R+A      LD  ++  N I    E    E QL+  L ++P VI+N+
Sbjct: 474 FIQYTYARIQSILRKATS--TSLDGQVY--NSI----ELHEKEKQLLKQLEQFPEVIQNS 525

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A + YDL   F+  + +      +  + A+  +    R++L   V   I +
Sbjct: 526 AEQHSPALIANFTYDLVKDFNSFYQN------VSILGADTEEEKSFRVELSRTVGQTIKN 579

Query: 573 GLNIIGVESPNEM 585
              ++G+  P  M
Sbjct: 580 AFGVLGITVPERM 592


>gi|169828341|ref|YP_001698499.1| arginyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
 gi|168992829|gb|ACA40369.1| Arginyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 557

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 33  VIERPRDCAHGHLST---NAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKG 87
           ++E+P+    G ++      A I  +P    P  IA  I ++++  I   V SV     G
Sbjct: 25  LLEKPKSLERGDMAFPCFTLAKIWKKP----PQQIAIDIASQLQNEIIHQVQSV----GG 76

Query: 88  FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N++L      +++L  I+     YG N   +G+ V ++F S N   P  +GH R  V+
Sbjct: 77  YVNIFLHQVKVTQQVLGLIMQEQQNYGTNQAERGSVV-LDFSSPNIAKPFSMGHLRSTVI 135

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           G+ LA++   +GY+  R  ++ D G Q   L ++
Sbjct: 136 GNALANIAVKNGYQAIRINHLGDWGTQFGKLIVA 169



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 55/291 (18%)

Query: 324 LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K+DG+  Y   DLA   Y + +Y+   + + YV+G++ + + K+L  V   +    A+
Sbjct: 293 ITKTDGATLYATRDLAAAFYRQQQYQP--NKIFYVVGNEQTLHFKQLFQVIEKMGYGWAK 350

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
            ++       + +DG   KMS R G  + L  V+ E                        
Sbjct: 351 -DLQHVPFGMMLKDGK--KMSTRKGKVVLLADVLAEAIATAKRNIEDKNPHLQQKERVAQ 407

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPD 474
            VG  +V F  L  K   L D +F   +  + E     YVQY+YAR  SI   AK   P 
Sbjct: 408 QVGVGAVIFNDL--KYHRLNDIEFSIEQMMNFEGETGPYVQYSYARICSIL--AKGNVPS 463

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                 P                +I+ L ++P+V++ +    +P  +A Y   LA +F+ 
Sbjct: 464 QLKSYAP---------LGQQAWSIILLLEQFPQVVDASFNQADPSLIAKYALQLARLFNK 514

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++H +       + A++ +    RL L H VA ++   L ++G+ESP  M
Sbjct: 515 YYAHQK-------ILADDAQ-QASRLALCHCVAIVLKESLALLGIESPENM 557


>gi|326476808|gb|EGE00818.1| arginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 584

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 132/598 (22%), Positives = 224/598 (37%), Gaps = 132/598 (22%)

Query: 50  AMILSRPLGLDPLTIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           A +LS P+ +    IAE+I   ++ D D   D+V  A         + + L  I + + +
Sbjct: 28  ANVLSAPVDIYRSYIAEIIQKLVECDEDTAYDAVQWANAS------TNADLMLITARLKL 81

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
            G+    N       +  +F S N     H GH R  ++G  +++L    G++V +  Y+
Sbjct: 82  KGV----NPKQLAEDIASKFSSPNIAKEFHAGHLRSTIIGAYISNLYESMGWDVIKVNYL 137

Query: 168 NDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---- 221
            D G Q   LA  V W+    + L+  +   P  +   VY K       +K +SE     
Sbjct: 138 GDWGKQFGLLA--VGWQRFGSEELFAEE---PLKHLLEVYAKINSLFAPEKEASEQARDR 192

Query: 222 ---LNFPEEKWLPIVKDYSVQ----------AMMKIIRD--------DLKALNIQHDIFI 260
               +  E K L   ++   Q          A+ K  RD            LNI+ D++ 
Sbjct: 193 GEDTSEIESKGLFAARNAFFQKMEDGDPDAIALWKRFRDVSIERYISTYARLNIKFDVYS 252

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E        S   +  ++L ++  VY       +   T   D  +      +  +G  V
Sbjct: 253 GESTV----KSSTVEKAESLLKEKGVY------TEDNGTWIIDFKKHG----APHLGVAV 298

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA-----AAV 374
            R  +   G+ TY   ++A    + E+  FD MIYV+ ++   Y +RL           V
Sbjct: 299 ARTRI---GTTTYLLRNIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDV 355

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN--- 431
           + K   IN            G  + MS R G    L  ++DE G      M   RKN   
Sbjct: 356 AAKLEHINF-----------GKVMGMSSRLGTVKILSDILDECGRAMHDVM---RKNPAK 401

Query: 432 -------SELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCR 462
                  +E+ D                     FD  K+   +    P  Y QYA+AR  
Sbjct: 402 YEQIENPAEVSDTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YHQYAHARLC 459

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYK 520
           SI R+          D+ P+ +         +   + ++  +A+YP V  NA    EP  
Sbjct: 460 SIVRKV---------DIDPKEITTANFSLLKEPHAINILRLMAQYPDVTCNALKTLEPTT 510

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +  YL+ LA      +        ++ + A + ++ + RL L      ++ +G+ ++G
Sbjct: 511 ILTYLFRLAHQVSSGYD------VIKVIGAESHEIMIARLALYEGARQVLENGMRLLG 562


>gi|154296931|ref|XP_001548894.1| hypothetical protein BC1G_12554 [Botryotinia fuckeliana B05.10]
 gi|150843081|gb|EDN18274.1| hypothetical protein BC1G_12554 [Botryotinia fuckeliana B05.10]
          Length = 634

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 55  RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYG 113
           R  G  P  +AE   A+    P V      G  ++  +     L ++L  +I+     +G
Sbjct: 81  RVKGKKPNELAEEWAAKFPESPLVHKPTTNGV-YLQFFFKADKLNELLIPTIIQQKTSFG 139

Query: 114 RN----LI-----GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
           +N    L+      KG K + IEF S N   P H GH R  ++G  L++L A  G++VTR
Sbjct: 140 QNKYLGLVDPEDPSKGQKKIVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAAVGWDVTR 199

Query: 164 EYYINDAGAQINTLALS 180
             Y+ D G Q   LAL 
Sbjct: 200 VNYLGDWGKQYGLLALG 216



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 52/280 (18%)

Query: 316 VGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
           VG  + + ++K  DG+  Y   D++    + E+  FD MIYV+ +D   ++++L  +   
Sbjct: 362 VGKGLGKAIVKRRDGTALYLTRDISELLQRKEKYDFDQMIYVVATDQELHLQQLFKIIEL 421

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-- 431
           +  K+ +     C+ +     G+   MS R G    L  ++ +V       M   +KN  
Sbjct: 422 LGYKELRDK---CQHINF---GLVHGMSTRRGTVKFLDDILRDVAEKMHEVM---QKNEA 472

Query: 432 -----------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463
                      S++L      V++ S +                 +   Y+QYA+AR  S
Sbjct: 473 KYEQIADPVATSDILGISSVMVQDMSGKRVNGYTFNMETMTSFEGDTGPYLQYAHARLCS 532

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKL 521
           I R+A          L P  +   +    T      LI  L++YP V++N     EP  +
Sbjct: 533 ITRKAA---------LTPEEIASADLSLLTEVHAQNLIRTLSQYPDVVQNTVKTLEPTTI 583

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
             YL+ +  V    + H R     R V      L  M+L+
Sbjct: 584 LTYLFKMTHVLSSSYDHLRIMGSEREVMKARMALLTMQLE 623


>gi|330886169|gb|EGH20070.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 430

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 30/183 (16%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 271 LRSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL- 328

Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                  FD     ++   PQE E       L   LA++   + N      P+ L  YLY
Sbjct: 329 ----GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLY 377

Query: 527 DLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           DLA +F   + +    G ENP  +            RL+L       +  GL+++G+E+ 
Sbjct: 378 DLAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETL 427

Query: 583 NEM 585
             M
Sbjct: 428 ERM 430


>gi|229059877|ref|ZP_04197252.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719422|gb|EEL71025.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 178

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L  I+    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169


>gi|156103177|ref|XP_001617281.1| arginyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148806155|gb|EDL47554.1| arginyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 591

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 133/602 (22%), Positives = 242/602 (40%), Gaps = 117/602 (19%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           GH   N A+ + +  G +        ++++I+  I  +   + +  + +GFI + LS  Y
Sbjct: 40  GHFQCNNALNIFKKYGKELNVENAQKLSQMIIENIS-ENFFEEIKSSPQGFITVKLSKEY 98

Query: 98  LRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           + K L           S+ +  ++ G +  G   +V ++F S N    MHVGH R  ++G
Sbjct: 99  IEKSLLKLYKNNQIDISVDIDEVKGGND--GDYKRVLVDFSSPNIAKEMHVGHLRSTILG 156

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D++  +  F   +  R  +I D G Q   +   +   +     N   ++PE       L 
Sbjct: 157 DSICRIFEFLKVQTIRVNHIGDWGTQFGMIINHIVSTHP----NFKENMPE-LTNLTSLY 211

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              K+L D          ++++    K+Y++    K+  +D   L +   +  S     +
Sbjct: 212 QEAKKLYD---------ADKEFEKSSKNYAI----KLQNNDEDCLFVWKKLCESS----K 254

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV------- 320
            +   I  I+D   +  YV E       S   Q   +  +QLL   + VGD +       
Sbjct: 255 KEFDKIYKILD--IKLEYVGESHYISMISPALQM--LKDEQLL---SNVGDAICYQSENF 307

Query: 321 DRPLL--KSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV-AAAVS 375
           + PL   KS+G Y Y + D+A  +++ K     D +IYV     +G +   E +   A  
Sbjct: 308 NVPLFLQKSNGGYGYDSTDVAAIHYRLKVLNS-DCLIYVTD---NGQLTHFETIFELAKK 363

Query: 376 EKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----K 430
            K A  N  L  +   L  +    K   R+G  I L ++++E G++  +  +L R     
Sbjct: 364 AKWASENTKLVHVGFGLVLNADNKKFKTRSGTNIKLINLINE-GTERAKKDLLERIQLKS 422

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQY-------------------------------AYA 459
             E   F    + + S+E  V  ++Y                               AY+
Sbjct: 423 EEEKTYFKGIDIDQLSEELCVSAIKYFDLKQHRNTDYKFSYDNMLNVKGNTGLYIIYAYS 482

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SIFR+       +D D   ++ +   S +   E+ L +H+ ++P V          +
Sbjct: 483 RMCSIFRKC-----SVDMDELSKDELNLVSPY---EVNLGLHILKFPDVFYFVLKNMLIH 534

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           KLA Y YDL + F   +    EN ++  + + N K    RL L     S++   L ++G+
Sbjct: 535 KLAEYTYDLTTTFTAFY----ENCKV--LNSENEK---TRLILCAIAKSLLQICLGLLGM 585

Query: 580 ES 581
           ++
Sbjct: 586 KA 587


>gi|189465272|ref|ZP_03014057.1| hypothetical protein BACINT_01618 [Bacteroides intestinalis DSM
           17393]
 gi|189437546|gb|EDV06531.1| hypothetical protein BACINT_01618 [Bacteroides intestinalis DSM
           17393]
          Length = 605

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 123/300 (41%), Gaps = 62/300 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL++DG+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  
Sbjct: 330 LLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGL 389

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V     +    +G   KM  R G  +    +++E                          
Sbjct: 390 VHFSYGMVELPEG---KMKSREGTVVDADDLIEEMVNTAKETSNELGKLDGLTQEEADNI 446

Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
              VG  ++++ +L    RKN      E +DF+          N   ++QY YAR +S+ 
Sbjct: 447 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 497

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A +    +  +      IP   E    E  LI  +A++  V++ A     P  +A Y 
Sbjct: 498 RKAAEAGIAVPAE------IPVGIELSEKEEGLIQMVADFAAVVKQAGSDYSPSIIANYT 551

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDL   ++  +           ++  +  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 552 YDLVKEYNQFYHD------FSILREEDEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           ++ +++ +    GHL+      L R     P   A+ I   +K +    + F   KGF+N
Sbjct: 27  QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPSVAAFNVIKGFLN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L ++ S   ++L++I     +YG       +  V IE+ S N   P+H+GH R  ++G+ 
Sbjct: 86  LTIASSAWIELLNNIHADK-QYGITAATDHSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144

Query: 150 LASLMAFSGYEVTREYYINDAGAQI 174
           LA+++  +G +V +   +ND G  I
Sbjct: 145 LANIVMANGNKVVKTNIVNDRGIHI 169


>gi|320590291|gb|EFX02734.1| arginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 694

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 14/118 (11%)

Query: 88  FINLYLSPSYLRKI-LSSIVVSGIEYGRNLI---------GKGTK-VNIEFVSANPTGPM 136
           FI  Y  P  L K+ L +I+  G  +G +            KG K + +EF S N   P 
Sbjct: 188 FIQFYFKPGPLAKLTLPTILREGKAFGNDKTNGLQDPKDASKGRKRLVVEFSSPNIAKPF 247

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNN 192
           H GH R  ++G  LA+L    G++V R  Y+ D G Q   LAL+ + R+  ++AL  N
Sbjct: 248 HAGHLRSTIIGGFLANLHEGVGWDVVRINYLGDWGKQYGLLALA-YERFGDEEALSKN 304



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 51/266 (19%)

Query: 349 FDNMIYVMGSDHSGYVKRLEAVA-----AAVSEKKAQINV--------------LLCELV 389
           FD MIYV+ S    ++K+L  +        +++K + +N                L +++
Sbjct: 451 FDKMIYVVASAQDLHLKQLFKIVELMGYKEIADKCSHVNFGLVLGMSTRRGTVKFLDDIL 510

Query: 390 RLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-Q 445
           R   D M   M      +  + +   V D +G  +V    +  K      FD  K+   +
Sbjct: 511 RDVADKMHEVMKTNEVKYSQVENPEAVADVLGISAVMVQDMTGKRINNYTFDIAKMTSFE 570

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL------QLI 499
               P  Y+QYA+AR  SI R++     DL+               DT+ L       +I
Sbjct: 571 GDTGP--YLQYAHARVCSIERRSGLSHSDLE-------------TADTTLLAEAHATNII 615

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++P V++N     EP  +  YL+ +       + H +       V  +  +L   R
Sbjct: 616 RLLAQWPDVVQNTLKTLEPTTVLTYLFKMTHALSSSYDHLQ-------VIGSEPELLKAR 668

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L  A   ++ +G+ I+G+   + M
Sbjct: 669 MALYGAARIVLGNGMRILGLSPVDRM 694


>gi|153805808|ref|ZP_01958476.1| hypothetical protein BACCAC_00045 [Bacteroides caccae ATCC 43185]
 gi|149130485|gb|EDM21691.1| hypothetical protein BACCAC_00045 [Bacteroides caccae ATCC 43185]
          Length = 605

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 62/300 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+ DG+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  
Sbjct: 330 LLRGDGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSL 389

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V     +    +G   KM  R G  +    +++E                          
Sbjct: 390 VHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDI 446

Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
              VG  ++++ +L    RKN      E +DF+          N   ++QY YAR +S+ 
Sbjct: 447 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 497

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A       +  +     IP   E    E  LI  +A++  V++ A     P  +A Y 
Sbjct: 498 RKAA------ESGIVVPGQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYT 551

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDL   ++  +           ++  N  + + R+ L   VA ++  G++++G+E P+ M
Sbjct: 552 YDLVKEYNQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMSLLGIEVPSRM 605



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 32  IVIERPRDCAHGHLSTNAA--MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + I++ +    GHL+      + +SR     P   A+ I   +K++    + F   KGF+
Sbjct: 28  VQIQKTKKEFEGHLTLVVFPFLKMSRK---GPEQTAQEIGEYLKVNEPAVAAFNVIKGFL 84

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHCRCAV 145
           NL ++ +    +L+ I     +YG   + K T+    V IE+ S N   P+H+GH R  +
Sbjct: 85  NLTIASATWIDLLNEIQADE-QYG---LVKATETSPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G+ LA+++A +G +V +   +ND G  I
Sbjct: 141 LGNALANIVAANGNKVVKTNIVNDRGIHI 169


>gi|329572537|gb|EGG54187.1| arginine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 292

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 46/236 (19%)

Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370
           KSDG+  Y   DLA   Y K  Y+  F   +YV+G++ S + K+L+AV            
Sbjct: 55  KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 112

Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                         +S +K +I VLL E++         +++++  D      V  +VG 
Sbjct: 113 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 171

Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            +V F  L  KN  L +FDF     V+ + +  P  YVQY +AR  SI R+A        
Sbjct: 172 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 220

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              F  +   + +  D    +++  L ++P  +  A    EP  +A +   LA  F
Sbjct: 221 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAF 273


>gi|71005906|ref|XP_757619.1| hypothetical protein UM01472.1 [Ustilago maydis 521]
 gi|46097112|gb|EAK82345.1| hypothetical protein UM01472.1 [Ustilago maydis 521]
          Length = 392

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 57/301 (18%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + DG+  Y   D+A    ++++     GFD MIYV+ S    ++ +   V   +    AQ
Sbjct: 85  RKDGTPLYITRDIAEAAQRFDKSFDGNGFDKMIYVVASQQDLHLAQFFKVLELMGYPWAQ 144

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
                 + +     GM + MS R G  + L +++DE                        
Sbjct: 145 KETSRLQHINF---GMILGMSTRKGTVVFLDNILDETRDKMHEVMKANEAKYAQVEDPER 201

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD- 470
               VG  +V+   +  K     +FD+ ++   +    P  Y+QY + R  S+ R+AKD 
Sbjct: 202 TADIVGMTAVKIQDMSSKRINNYNFDWSRMLSFEGDTGP--YLQYNHVRLCSVERKAKDS 259

Query: 471 -----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                   DLD      ++I +    D     L++ +A++P  ++ A    +P  +  Y 
Sbjct: 260 DGLELATADLDLSSINLDLISEPKARD-----LVMLIAQWPDTVKAAMKDHQPSTIVTYA 314

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + L  +    W           V+   + L + RL +      ++ S L ++ +     +
Sbjct: 315 FRLTHLISSCWE-------FLLVKGQEKDLALARLFVFRCCKDVLGSALRLLTITPLEHL 367

Query: 586 S 586
           S
Sbjct: 368 S 368


>gi|332291119|ref|YP_004429728.1| arginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169205|gb|AEE18460.1| arginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 592

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 14/133 (10%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY Y R ++I R+AK++   ++        I QE      E +L+  + EYP  I+ A
Sbjct: 474 FIQYTYVRIQAILRKAKEMNVPVE--------IAQERTLHPKEKELLKIIQEYPATIQLA 525

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              + P  +A Y YDL   ++  +       +++ +  +N +    R+ L   V  +I S
Sbjct: 526 AAQKSPAIIANYTYDLVKEYNSFFQ------QVQILGTDNIEDQSFRVALSKEVGLVIES 579

Query: 573 GLNIIGVESPNEM 585
             +++G+E P  M
Sbjct: 580 AFSLLGIEVPERM 592



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           + F   KGF+NL ++ S+     + I  +   +GR     G  V +E+ S N   P+H+G
Sbjct: 73  TAFNVVKGFLNLVIADSFYMSSFADIQAAE-NFGRTP-ESGKAVMVEYSSPNTNKPLHLG 130

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           H R  ++G +++ ++  +G +V +   IND G  I
Sbjct: 131 HVRNVLLGYSVSEIIKAAGSKVYKTQIINDRGIHI 165


>gi|255689975|ref|ZP_05413650.1| arginine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624582|gb|EEX47453.1| arginine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 605

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 68/303 (22%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+ DG+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  
Sbjct: 330 LLRGDGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSL 389

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V     +    +G   KM  R G  +    +++E                          
Sbjct: 390 VHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDI 446

Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
              VG  ++++ +L    RKN      E +DF+          N   ++QY YAR +S+ 
Sbjct: 447 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 497

Query: 466 RQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           R+A +   + P+          IP   E    E  LI  +A++  V++ A     P  +A
Sbjct: 498 RKAAESGIVVPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIA 548

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y YDL   ++  +           ++  N  + + R+ L   VA ++  G+ ++G+E P
Sbjct: 549 NYTYDLVKEYNQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVP 602

Query: 583 NEM 585
             M
Sbjct: 603 ARM 605



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 17/168 (10%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAA--MILSRPLGLDPLTIAELIVA 70
           N LK + C  +V +K++    +++ +    GHL+      + +SR     P   A+ I  
Sbjct: 13  NGLKAL-CGQEVPEKMVQ---LQKTKKEFEGHLTLVVFPFLKMSRK---GPEQTAQEIGE 65

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIE 126
            +K +    + F   KGF+NL ++ +   ++L+ I     +YG   + K T+    V IE
Sbjct: 66  YLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYG---LVKATETSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           + S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHI 169


>gi|311896743|dbj|BAJ29151.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 498

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G +V +E  S NP  PMH+G  R  ++G +LA L+  +G EV   Y++ND G Q+
Sbjct: 75  RGRRVIVEHTSINPVHPMHLGALRSTLIGGSLARLLRSAGAEVRVHYFVNDHGRQV 130


>gi|327355532|gb|EGE84389.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 635

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 123/570 (21%), Positives = 219/570 (38%), Gaps = 120/570 (21%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90
           I+R +  AHG +    A +  +   +D + +   ++L    +  +P    VFI       
Sbjct: 61  IQRTQVLAHGDVMVVVARLRLKGANVDQVALDLSSKLCGISLISNPVPKGVFIP------ 114

Query: 91  LYLSPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           ++ S + L           R++     ++G++   N      KV +EF S N     H G
Sbjct: 115 IFFSATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAG 174

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLP 197
           H R  ++G  +A+L    G++V +  Y+ D G Q   LA  V W+    + L+  +    
Sbjct: 175 HLRSTIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLA--VGWQKFGSEELFQKEP--- 229

Query: 198 EGYYPGVYLKHVGKELADKYSS-ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                   LKH    L D Y+    L  PE++     +D   Q   +I   + K L  + 
Sbjct: 230 --------LKH----LLDVYAKINTLFKPEQEASKNARDNG-QDTSEI---ENKGLYAER 273

Query: 257 DIFISEDDFHRGDPSPI------RDI-ID---------NLARQGYVYEGILPPPKSKTTQ 300
           + F  +     GDP  +      RDI I+         N+A   Y  E  + P   ++ +
Sbjct: 274 NAFFKK--MEDGDPDALSLWRRFRDISIERYIRTYARLNIAFDEYSGESTVRPETIESVE 331

Query: 301 KCDMDRKQLLFR--------------STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           K  M +++ ++               +  +G  V R      G+ TY   D+A    +  
Sbjct: 332 K--MLKEKGIYEENEGSWVIDFKKHGARKLGTAVVR---NRGGTTTYLLRDIAAVLERVG 386

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV--------------LLC 386
           +  FD MIYV+ ++   Y +R+           ++ K   +N               LL 
Sbjct: 387 KYKFDKMIYVVSAEQDSYFQRVFKTIEIMGYPDIATKLVHVNFGKVQGMSSRLGTVKLLS 446

Query: 387 ELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +++    + M   M      +  +   + V D VG  +V    +  K      FD  ++ 
Sbjct: 447 DILDECGNAMHEVMRANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMT 506

Query: 444 E-QSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +    P  Y+QY++AR  SI R+A+   D     DF L            +   + ++
Sbjct: 507 SFEGDTGP--YLQYSHARLCSIMRKAQLTADQVAKADFTLLK----------EPHAVDIV 554

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             +A+YP +  +A    EP  +  YL+ L 
Sbjct: 555 RLVAQYPDITSHAFKTLEPITVLTYLFRLT 584


>gi|311244166|ref|XP_003121341.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 275

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 11/129 (8%)

Query: 54  SRP-LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111
           SRP + +  + +AE    ++K D  V S    G+G +N  ++   L K +L  ++  G +
Sbjct: 57  SRPDIQIQAMRLAE----KLKCD-TVVSEISTGQGTVNFKINRELLTKTVLQQVIEDGSK 111

Query: 112 YG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           YG ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+
Sbjct: 112 YGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYL 171

Query: 168 NDAGAQINT 176
            D G Q  T
Sbjct: 172 GDWGMQFVT 180


>gi|212544232|ref|XP_002152270.1| arginyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065239|gb|EEA19333.1| arginyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 831

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 115/524 (21%), Positives = 195/524 (37%), Gaps = 102/524 (19%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           S +E GR       K+ IEF S N        H R  ++G  +A+     G++VTR  Y+
Sbjct: 148 SSLEAGRK------KLLIEFSSPNIASEFQARHLRSTILGAYIANQYENMGWDVTRLNYL 201

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKELA 214
            D G  +  L ++      + L+  D   P G+   +Y              K +  E  
Sbjct: 202 GDWGKPMGLLGVAWEKFGSEELFQAD---PAGHLHDIYHKILELFVPEQAASKKIRDEGG 258

Query: 215 DKYSSELLNFPEEK--WLPIVKDYSVQA--MMKIIRD-------DLKA-LNIQHDIFISE 262
           D  S E      E+  +   ++D   QA  + K  RD       DL A LN++ D +  E
Sbjct: 259 DPASIEGQGVFAERNAFFKRMEDDDEQAVALWKRARDVNIKNYTDLYARLNVRFDEYSGE 318

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                     + +I   L  +G   E       S  +   D+ +   +  + ++ D    
Sbjct: 319 SQVRLETMMEVEEI---LKSRGISEE-------SAGSWMIDLKKHAKISGTAIIRDRT-- 366

Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD-HSGYVKRLEAV---------- 370
                 GS TY   DLA    +  +  FD MIYV+ +D H+ +  RL  +          
Sbjct: 367 ------GSSTYLLRDLAAVLERSRKYSFDKMIYVVAADQHTTHFSRLFKILELMDMSDLA 420

Query: 371 ----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                      + +SEK    +  L E++  ++  M             L H  + + S 
Sbjct: 421 NKLQHVQFSNVSKMSEKFGN-DRTLDEILDQFQKAMCESFKIHPEMASLLGHSEESIFSI 479

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--YVQYAYARCRSIFRQAKDIFPDLDFD 478
           ++  ++    +S+    +  +V   +   P    Y+QY YAR  +I             D
Sbjct: 480 AISALVAGELSSKRAQDNAFEVTRMTSFEPGTGPYLQYWYARLCTIL------------D 527

Query: 479 LFPRNVIPQESEFDT---SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
            +  ++ P E EFDT    +  L+  L ++P +   A  + EP  +  YL +LA      
Sbjct: 528 AYETSIKPSEEEFDTLSDEDFSLLRLLVQFPDITHLAYESLEPATVMAYLVNLAVQLEVC 587

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +     N      QAN          L  A   ++ SG+ ++G+
Sbjct: 588 FDECENNVANNLTQAN----------LYEATRRVMESGMKLLGI 621


>gi|194246825|ref|YP_002004464.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807182|emb|CAP18623.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 565

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 125/541 (23%), Positives = 223/541 (41%), Gaps = 92/541 (17%)

Query: 87  GFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           GF+N+ L+ + L K IL +IV S  +YG       T V +++ S N      +GH R  V
Sbjct: 75  GFLNIKLNRNLLTKNILLNIVDSKDKYGSKEYNNQTIV-LDYSSPNIAKNFSIGHLRSTV 133

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--FWRYQQALYNNDSDLPEGYYPG 203
           +G+ L ++    G++     ++ D G Q   L L+   +  +++ L +  ++L + Y   
Sbjct: 134 IGNALKNIYQKLGFKTISINHLGDWGTQFGKLILAYKKWGNHKKVLEDPMNELQKLY--- 190

Query: 204 VYLKHVGK--ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNI 254
           V+     K     ++ +S+L    E+K       W  + K+ S++   KI   DL  L I
Sbjct: 191 VFFHEQAKINPKLNQEASDLFYQLEQKNEELIGLW-KLFKEISLKEFHKIY--DL--LGI 245

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +I E                        Y   +P    +  QK  +   Q  +  T
Sbjct: 246 KFDYYIGES----------------------FYNDQIPDLILELKQKKLLKLDQNAYIVT 283

Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371
           +  +D+  P L  K +GS  Y   D+A    ++    F  ++YV+G++   + ++L+ V 
Sbjct: 284 L--NDMLPPALIQKKNGSTVYLTRDIAALLYRFRHYNFSKILYVVGNEQKLHFQQLKQVV 341

Query: 372 AAVSEKKAQINV----LLCELVRL-YRDGMPIKM-------SKRAGDFITLRH------- 412
             +      +N+    +L +  +L  R    IK+        K A   IT+++       
Sbjct: 342 FKMGYDIDLVNINFGLILFKGKKLSTRFQKTIKLIDVIEQIKKLAKKIITIKNPNLLNIE 401

Query: 413 -VVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA-- 468
            + +++   S+ F  L  KN+  LD DF  +   Q +     Y+QY   R  SI  +   
Sbjct: 402 DISNKIAIGSIIFNDL--KNNRHLDIDFDIERMIQFEGQTGSYLQYTCVRINSILEKIKK 459

Query: 469 ----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
               + ++ +L+        I   S        LI  L  +  ++E   I   P  LA Y
Sbjct: 460 EKKKQIVWHELE--------INNNSYLKEHYFILIKLLDRFSLILEQTKIENMPSILARY 511

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L  +A  F+  +S  +       +Q  N       L LV +V  I+  GL ++G+   N+
Sbjct: 512 LLKIAKKFNHFYSKEKIITSQIILQNTN-------LLLVQSVFIILKEGLRLLGIPLLNK 564

Query: 585 M 585
           M
Sbjct: 565 M 565


>gi|242783546|ref|XP_002480208.1| arginyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218720355|gb|EED19774.1| arginyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 641

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 19/141 (13%)

Query: 89  INLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNIEFVSANPTGPMH 137
           +  +  P+ L K ++S I+ +   YG N  +G        KG K + +EF S N   P H
Sbjct: 119 LQFFFKPAPLTKTVISRILENKSTYGTNGNLGLRDPSDPSKGKKKMIVEFSSPNIAKPFH 178

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD 195
            GH R  ++G  LA+L   +G+EV +  Y+ D G Q   LA + F RY  ++AL  +   
Sbjct: 179 AGHLRSTIIGGFLANLFTITGWEVIKMNYLGDWGKQYGLLA-NGFERYGSEEALTKD--- 234

Query: 196 LPEGYYPGVYLKHVGKELADK 216
            P  +   VY+K + K++A++
Sbjct: 235 -PINHLFDVYVK-INKDMAEQ 253



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 14/127 (11%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYA+AR  SI R+A     +++ +  P+  +   +E  +  + L  +LA++P V+ N 
Sbjct: 503 YLQYAHARLCSILRKA-----EINVEDLPKANLSLLTE--SHAIDLARYLAQWPDVVLNT 555

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  +  YL+ +  +    +        LR V    ++L + R+ L  +   ++++
Sbjct: 556 VKTLEPTTVLTYLFRMTHMLSSSYD------ILRIV-GREQELALARMALYESARQVLHN 608

Query: 573 GLNIIGV 579
           G+ ++G+
Sbjct: 609 GMKLLGL 615


>gi|94969059|ref|YP_591107.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94551109|gb|ABF41033.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 647

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L  +V++ P     G  +   +  L++ L   P  IAE +   +      +   +AG G+
Sbjct: 25  LPTLVVDAPPKVEMGEYALPFSFELAKRLRKAPRKIAEEVATELPPIEGFEKPEVAGAGY 84

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN  L     R   ++ +  G       +    K+ +E  S NP    H+GH R +++GD
Sbjct: 85  INFRLK----RGDAATALAKG---ESTPVTHDGKILVEHTSINPNKAAHIGHLRNSILGD 137

Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174
           T   L+  +G  V  + YI++ G Q+
Sbjct: 138 TFVRLLRAAGRTVDIQNYIDNTGVQV 163


>gi|327349062|gb|EGE77919.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 710

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 22/173 (12%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116
           G  P  +   +V  +     + +  ++G   +  Y  P  L K ++SSI  +   YG N 
Sbjct: 146 GRKPAEVTAQLVENLPPSDLIGTPVVSGT-HVQFYFKPEPLTKTVISSIQKNRATYGTNA 204

Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G        KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y
Sbjct: 205 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLHTVMGWDVVKMNY 264

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           + D G Q   LA      Y++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 265 LGDWGKQYGLLANG----YEK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 310


>gi|167044615|gb|ABZ09287.1| putative DALR anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG7F19]
          Length = 543

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 39/63 (61%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           YG   IGK +K+ +E  S NP   +H+GH R   +GD ++ +++ + Y+V    YI+D+G
Sbjct: 26  YGSIDIGKNSKLVVEHTSVNPNKALHIGHLRNVAIGDAVSRILSKANYDVKVLNYIDDSG 85

Query: 172 AQI 174
            Q+
Sbjct: 86  LQV 88



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 16/180 (8%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           D  +L  +   V   ++R+ ++     +++ FD      +   +   Y+QY+  R   I 
Sbjct: 380 DNASLCEIAHNVAVGTIRYELIKPDLGKIITFDI-NTSLKLDGDTCSYIQYSCVRALRIL 438

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            ++ +  P+ D      N     +E++TS   LI  +  +   + +A     P  +A Y 
Sbjct: 439 EKSGN-EPNFDVQFDQLN-----TEYETS---LIKQIGLFEVFVNDAAKNYSPKVIAKYC 489

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           YDLA  F   + H      ++ ++A   +L   RL LV +    +   L+++G+ +P  M
Sbjct: 490 YDLAVAFSSFYEH------VKVLKAETPELINARLCLVLSFKLTLEKALDLLGITAPQRM 543


>gi|302345955|ref|YP_003814308.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150153|gb|ADK96415.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 606

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 63/301 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+ DG+  Y   D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  
Sbjct: 330 LLRKDGTSVYMTQDIGTAEMRFNDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDL 389

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFI----------------------TLRHVVDE---- 416
           V     +    +G   KM  R G  +                       L  + +E    
Sbjct: 390 VHFSYGMVELPNG---KMKSREGTVVDADDLVASMIENAKSLSEDKVNKLEGITEEEKNE 446

Query: 417 ----VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
               VG  ++++ +L    RKN      E +DF+          N   ++QY YAR RSI
Sbjct: 447 IARIVGMGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSI 497

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A+     L   L        ++  +  E+ LI  L ++   +  A I   P  +A Y
Sbjct: 498 LRKAEAQNITLPASL------NDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANY 551

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            Y+L   F+  +           + A+     + RL +   VA +I +G+ ++G+E P  
Sbjct: 552 CYELTKEFNQFYHD------YSILNADTEAEKITRLMIAKNVAKVIKNGMALLGIEVPER 605

Query: 585 M 585
           M
Sbjct: 606 M 606



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KGF+NL ++ +   ++L+ I        + +  +   V IE+ S N   P+H+GH R  +
Sbjct: 81  KGFLNLVIAQAAWTELLNDINADEKFGEKRVTDESPLVMIEYSSPNTNKPLHLGHVRNNL 140

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G +LA +M  +G +V +   +ND G  I
Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHI 169


>gi|282861109|ref|ZP_06270174.1| DALR anticodon binding domain protein [Streptomyces sp. ACTE]
 gi|282563767|gb|EFB69304.1| DALR anticodon binding domain protein [Streptomyces sp. ACTE]
          Length = 386

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 27/147 (18%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q++ NP+F V+YA+AR R++ R A+     L F            E D     L   LA+
Sbjct: 261 QTEANPLFLVRYAHARARALTRGAE----QLGFT--------GAYEQDVDAPALHAALAD 308

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVF------HGHWSHGRENPRLRFVQANNRKLTMM 558
           +P V+ +A     P +LA +L  +A  F       G    G E P      A +R     
Sbjct: 309 HPGVLASAARHHAPDRLARHLESVARAFFDLHDTAGPLPVGDEKP-----SAAHRS---- 359

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A  +++  GL+++G+ +P  +
Sbjct: 360 RLALAEAAGTVLAGGLSLLGISAPRHL 386



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 14/161 (8%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+ P  L    +
Sbjct: 32  ADLSRTVLHAVRRAVDEDALRAPVPARVRVERTRPGGSGDYACAVALQLAGPAALPAREV 91

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS----GIEYGRNLIGKG 120
           A ++  R+   P V  V I G GF+N  L         +S+V +    G +YG   +  G
Sbjct: 92  ARILRDRVAAAPGVGHVEITGPGFLNFTLDAPADADARASVVRAVLDRGPQYGHVTVDNG 151

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           T   +           H    R AV+  T+  L+   G +V
Sbjct: 152 TLHRLH----------HPPEVRAAVLARTVGHLLRAQGGQV 182


>gi|315224424|ref|ZP_07866254.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945627|gb|EFS97646.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 631

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           L R +  +P+ I E I   +K    D+ + F   KGF+NL ++ SY    L   V +  +
Sbjct: 81  LLRHIKGNPVQIGEQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKE-VKNNPQ 139

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G         + +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G
Sbjct: 140 FGLATPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 199

Query: 172 AQI 174
             I
Sbjct: 200 IHI 202



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIE 510
           ++QY YAR +SI R+          ++  RN   I + +     E  L+  +  +P V++
Sbjct: 511 FIQYTYARIQSIMRKYT--------EMGGRNEAAIEKVNGLHEKEKALLKSITLFPSVVQ 562

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAV 566
           +A  +  P  +A Y+YDL   F+  + +    G E    R            R+ L   +
Sbjct: 563 DAADSYSPAIIANYVYDLVKDFNSFYQNVSILGEEEESKR----------DFRVMLSKKI 612

Query: 567 ASIINSGLNIIGVESPNEM 585
             II     ++G++ P  M
Sbjct: 613 GEIIAESFKMLGIQVPERM 631


>gi|86133816|ref|ZP_01052398.1| Arginyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820679|gb|EAQ41826.1| Arginyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 591

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 19/134 (14%)

Query: 453 YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           ++QY YAR +SI R+A+ D    +  DL  +            E +L+  LA +P  I+ 
Sbjct: 476 FIQYTYARIQSIIRKAEFDYSNSVTIDLHEK------------EKELLKQLALFPETIQQ 523

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P  +A Y YDL   F+  + +      +  +   N+   + R+QL   VA  I 
Sbjct: 524 AASNYSPAVIANYTYDLVKEFNSFYQN------VSILGEENQDKKIFRVQLSKKVADTIK 577

Query: 572 SGLNIIGVESPNEM 585
              +++G++ P  M
Sbjct: 578 IAFSLLGIQVPERM 591



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144
           KGF+NL +S ++     +SI      +G     +  K + +E+ S N   P+H+GH R  
Sbjct: 79  KGFLNLVISDAFYLDFFNSIYKDE-NFGTAAAKEDEKAIMVEYSSPNTNKPLHLGHVRNN 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           ++G +++ ++  +G +V +   IND G  I
Sbjct: 138 LLGFSVSEIIKAAGKKVYKTQIINDRGIHI 167


>gi|291333570|gb|ADD93264.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 252

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 50/277 (18%)

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+AY   K+ R F+  + ++G DH      L      +   K   + L    V L 
Sbjct: 2   YTTRDIAYHLNKFTR-FNKALNILGEDHKLQSNLLNIALEELGSNKP--DNLFYSFVNLP 58

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEV------------GSDSVRFMMLWRKNSELLDFDFC 440
                 KMS RAG  + L  ++D++             SD+ + ++  +     L ++  
Sbjct: 59  GG----KMSTRAGRVVYLDDMMDQIVDASLERLREVDMSDNQKRLLSEKIGIGSLRYNVL 114

Query: 441 KVKEQS------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           KV+ +             + +   +  Y++AR  SI R+ +   P+   D          
Sbjct: 115 KVQPEKGFTFSIDDALSIQGDSAPFAMYSHARMSSILRRYEASIPNSKLD---------- 164

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           S+   SE++LI  +A++P+ +E+A      + +  Y++ L+S F+  +         + +
Sbjct: 165 SDLVESEIELIRTMAKWPKTVESAVDKFAIHIIPNYVHQLSSKFNNFYRD------CKVI 218

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N  L   R+ LV +   I+   L+I+GVE+P+ M
Sbjct: 219 GDTNEAL---RINLVSSSKRILFDALDILGVEAPDRM 252


>gi|329572536|gb|EGG54186.1| arginine--tRNA ligase domain protein [Enterococcus faecalis TX1467]
          Length = 196

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 7/169 (4%)

Query: 25  EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           E+  +D+I  ++E P+   HG ++   A  L++     P  IA  +  +I    + + + 
Sbjct: 17  EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74

Query: 83  IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           + G  ++N +++   + + ++  +V     YG +  G    V I+  S N   P+ +GH 
Sbjct: 75  VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQAL 189
           R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++A+
Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAV 182


>gi|260593384|ref|ZP_05858842.1| arginine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534660|gb|EEX17277.1| arginine--tRNA ligase [Prevotella veroralis F0319]
          Length = 606

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 120/301 (39%), Gaps = 63/301 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           LL+ DG+  Y   D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  
Sbjct: 330 LLRKDGTSVYMTQDIGTAEMRFNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDL 389

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------DE--- 416
           V     +    +G   KM  R G  +    +V                       DE   
Sbjct: 390 VHFSYGMVELPNG---KMKSREGTVVDADDLVASMIENAKTLSEDKVNKLEGITEDEKNE 446

Query: 417 ----VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
               VG  ++++ +L    RKN      E +DF+          N   ++QY YAR RSI
Sbjct: 447 IARIVGMGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSI 497

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A+     L   L        ++  +  E+ LI  L ++   +  A I   P  +A Y
Sbjct: 498 LRKAEAQSIALPASL------TDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANY 551

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            Y+L   F+  +           + A+     + RL L   VA +I +G+ ++G+E P  
Sbjct: 552 CYELTKEFNQFYHD------YSILNADTEAEKITRLVLAKNVAKVIKNGMALLGIEVPER 605

Query: 585 M 585
           M
Sbjct: 606 M 606



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I +++ R    G+L T     L +     P   A+ I   +K +    + F   KGF+NL
Sbjct: 28  IQLQKTRSDFEGNL-TLVTFPLLKTSHKKPEDTAQEIGEYLKKNCKAIADFNVVKGFLNL 86

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++ +    +L+ I  +  ++G   + + +  V IE+ S N   P+H+GH R  ++G +L
Sbjct: 87  VIAQAAWVGLLNDINANE-KFGEKSVTENSPLVMIEYSSPNTNKPLHLGHVRNNLLGWSL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQI 174
           A +M  +G +V +   +ND G  I
Sbjct: 146 AQIMEANGNKVVKTNIVNDRGIHI 169


>gi|145631015|ref|ZP_01786791.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983482|gb|EDJ90958.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 321

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 112/304 (36%), Gaps = 58/304 (19%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLE 368
           GD +   + K DG + Y   D+A  K +YE    N   V                 ++  
Sbjct: 41  GDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRTLVFSDTRQSQHMQQAWLITRKAG 100

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            V  + S +     ++L       +DG P K   R G  + L  ++DE            
Sbjct: 101 YVPDSFSLEHKNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEK 152

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          +G  SV++  L +  +    FD+  +    + N   Y+QYAY R 
Sbjct: 153 NTNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRI 211

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           RSIF + +           P  +       D  E  L + L ++   ++       P+ L
Sbjct: 212 RSIFNKTE--INSTALLAAPLTIK------DDKERTLAIKLLQFEEAVQTVGKEGTPHVL 263

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YLY+LA +F   + H         + A +  + + RL+L       +  GL ++G+++
Sbjct: 264 CAYLYELAGIFSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLALLGIKT 317

Query: 582 PNEM 585
             +M
Sbjct: 318 VEKM 321


>gi|256819031|ref|YP_003140310.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580614|gb|ACU91749.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 597

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           L R +  +P+ I E I   +K    D+ + F   KGF+NL ++ SY    L   V +  +
Sbjct: 47  LLRHIKGNPVQIGEQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKE-VKNNPQ 105

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G         + +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G
Sbjct: 106 FGLATPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 165

Query: 172 AQI 174
             I
Sbjct: 166 IHI 168



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIE 510
           ++QY YAR +SI R+          ++  RN   + + S     E  L+  +  +P V++
Sbjct: 477 FIQYTYARIQSIMRKYA--------EMGGRNEAAVEKVSGLHEKEKALLKSITLFPSVVQ 528

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAV 566
           +A  +  P  +A Y+YDL   F+  + +    G E    R            R+ L   +
Sbjct: 529 DAADSYSPAIIANYVYDLVKDFNSFYQNVSILGEEEESKR----------DFRVMLSKKI 578

Query: 567 ASIINSGLNIIGVESPNEM 585
             II     ++G++ P  M
Sbjct: 579 GEIIAESFKMLGIQVPERM 597


>gi|296816723|ref|XP_002848698.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839151|gb|EEQ28813.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 591

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 106/287 (36%), Gaps = 73/287 (25%)

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA-----AVSEKKAQINVLLC 386
           Y   D+A    + E+  FD MIYV+ ++   Y +RL           VS K   IN    
Sbjct: 330 YLLRDIAAVLERVEKYKFDKMIYVVSTEQDLYFQRLFKTIELMGHPEVSSKLEHINF--- 386

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD---------- 436
                   G    MS R G    L  ++DE GS     M   RKN    D          
Sbjct: 387 --------GKVQGMSSRLGTVKLLGDILDECGSAMHDVM---RKNPSKYDQVENPTWVAD 435

Query: 437 ---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
                                FD  K+   +    P  Y+QYA+AR  SI R+      D
Sbjct: 436 VLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKVNIDLKD 493

Query: 475 L---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           +   DF L            +T  + ++  + +YP V  NA    EP  +  YL+ LA  
Sbjct: 494 ITAADFSLLK----------ETHAISILRLMTQYPEVTNNALKTLEPTTILTYLFRLAHQ 543

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
               +        ++ + A + ++T+ RL L      ++ +G+ ++G
Sbjct: 544 VSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENGMRLLG 584


>gi|315051012|ref|XP_003174880.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340195|gb|EFQ99397.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 645

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      V+   + G      Y        ++ SI+ +   YG N  
Sbjct: 82  GKKPQEIAADIAAKFPKSDLVEPPVVVGAHLQFFYSHKPMTENVIRSILANKDAYGSNPN 141

Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                     KG K V +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 142 VGLRDQRDASKGKKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTVLGWEVLKINYL 201

Query: 168 NDAGAQINTLA 178
            D G Q   LA
Sbjct: 202 GDWGKQYGLLA 212



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 62/291 (21%)

Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+A   +   E  FD MIYV+ +    ++ +L      V +K     
Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYKFDKMIYVVAAQQELHLAQLFKTTELVGKKDLASR 436

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431
              CE +     GM   MS R G    L  ++ +VG      M   +KN           
Sbjct: 437 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQTKYEQIEDPV 487

Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472
             +++L      V++ S           EN          Y+QYA+AR  S+ R+A +I 
Sbjct: 488 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIK 546

Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           P+     D  L            ++  + LI  LA++P V+ NA+   EP  +  YL+ +
Sbjct: 547 PEELGGADLSLLT----------ESHAIDLIRLLAQWPDVVFNASKTLEPCTILTYLFRM 596

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                  +        +  V  +  ++ M R+ L  +   ++++G+ ++G+
Sbjct: 597 THTLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGL 640


>gi|88802725|ref|ZP_01118252.1| arginyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781583|gb|EAR12761.1| arginyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 601

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR +SI R+A       +FD      +    +    E +L+  L  YP  I+ A
Sbjct: 486 FIQYTYARIQSIVRKA-------NFDYSKVVAV----DLHEKEKELLKQLELYPATIQQA 534

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             +  P  +A Y YDL   F+  + +      +  +   +    + R+QL   VA  I S
Sbjct: 535 AASYSPAVIANYTYDLVKEFNSFYQN------VSILGEEDLDKKIFRVQLAKKVADTIKS 588

Query: 573 GLNIIGVESPNEM 585
             +++G+E P  M
Sbjct: 589 AFSLLGIEVPERM 601



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 28/50 (56%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +E+ S N   P+H+GH R  ++G  +A +   SG +V +   IND G  I
Sbjct: 118 VEYSSPNTNKPLHLGHVRNNLLGYAVAEITKASGKKVYKTQIINDRGIHI 167


>gi|295094320|emb|CBK83411.1| arginyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 419

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L++ L   P  IA  I   I     ++ + +AG  ++N Y+      K +     +  ++
Sbjct: 43  LAKVLRKAPNMIAADIKEAIGDVDFIEKIDVAG-AYLNFYIKKDVFVKTMIEAANTD-DF 100

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           G++ IG+G  + I++ S N     HVGH R  ++G++L  + +  GY V R  ++ D G 
Sbjct: 101 GKSDIGEGQTICIDYSSPNVAKNFHVGHLRTTIIGNSLYKIHSKLGYNVVRINHLGDWGT 160

Query: 173 QINTLALSV-FWRYQQAL 189
           Q   L ++   W  ++A+
Sbjct: 161 QFGKLIVAYKAWGSKEAV 178


>gi|297596142|ref|NP_001042078.2| Os01g0158500 [Oryza sativa Japonica Group]
 gi|255672893|dbj|BAF03992.2| Os01g0158500 [Oryza sativa Japonica Group]
          Length = 80

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           ++F S N    MHVGH R  ++GDTLA +  F+  EV R  ++ D G Q+  L + +F +
Sbjct: 20  LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGDWGTQVLNLNVLIFKQ 79

Query: 185 Y 185
           +
Sbjct: 80  F 80


>gi|315304822|ref|ZP_07874977.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313626812|gb|EFR95790.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 109

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%)

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           RS   Q  D+  D D  L     +  E+E+D     L+  L E+  V+  A + + P+++
Sbjct: 2   RSGKEQNLDVSKDADMSL-----LQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRI 51

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL DLAS FH  ++        + +  +N ++T  RL L+      + +GL ++GV +
Sbjct: 52  VRYLNDLASAFHRFYNSN------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSA 105

Query: 582 PNEM 585
           P +M
Sbjct: 106 PEKM 109


>gi|258565281|ref|XP_002583385.1| arginyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237907086|gb|EEP81487.1| arginyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 699

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 126/581 (21%), Positives = 218/581 (37%), Gaps = 173/581 (29%)

Query: 98  LRKILSSIVVSGIEYGRNL-IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ ++ SI+ +   YG N  IG        +G K + +EF S N   P H GH R  ++G
Sbjct: 123 IKTVIPSILKNKATYGTNANIGLRDPRDPSQGKKRIVVEFSSPNIAKPFHAGHLRSTIIG 182

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGV 204
                   F G E     +  +            +W     +Y N+ +L   P  +   V
Sbjct: 183 -------GFPG-EFAHSLWDGNMA----------YWPNGYKMYGNEEELLKDPINHLFEV 224

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFI- 260
           Y+K + K++A++                +KD  ++  +K+I+D   D  AL  + D  + 
Sbjct: 225 YVK-INKDVAEQEGP-------------IKD--LKERIKVIKDKGEDAAALEKELDTLVA 268

Query: 261 -SEDDFHR--------GDPSPI------RDIIDNLARQGY--------VYEGILPPPKSK 297
            S D+  R        GD   +      RD+     RQ Y        VY G     +S+
Sbjct: 269 ASWDEKARQYFRSMEDGDEDALALWRRFRDLSITKYRQTYARLNIDFDVYSG-----ESQ 323

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL-----------------KSDGSYTYFAADLA- 339
             Q+  +       +   V +D +  ++                 + DG+  Y   D+A 
Sbjct: 324 VKQES-LSTVYNTMQEKGVSEDSEGAIIVDFTKHGAKKLGKAIVVRKDGTPLYLTRDIAA 382

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            F+ +    FD M+YV+ +    ++ +L      +  K       L +  +    GM   
Sbjct: 383 IFERETAFNFDKMLYVVAAQQDLHLAQLFKTVELMGRKD------LADKCQHINFGMVRG 436

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF------- 452
           MS R G    L  ++ +VG      M   RKN+         VK +  ENPV        
Sbjct: 437 MSTRKGTVKFLNDILKDVGDKMHEVM---RKNA---------VKYEQVENPVETADTLGI 484

Query: 453 --------------------------------YVQYAYARCRSIFRQAKDIFPDL--DFD 478
                                           Y+QYA+AR  S+ R+A +I P +    D
Sbjct: 485 TSVMVQDMSGKRINGYEFNLEDMTSFEGDTGPYLQYAHARLCSVTRKA-EIDPAVLGSAD 543

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +++ +    D + L     L+++P V+ NA    EP  +  YL+ +        S 
Sbjct: 544 L---SLLTESHAVDLARL-----LSQWPDVVLNAMKTLEPTTIITYLFRMTHTL----SS 591

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           G E  +   V  +  +L   R+ L H    ++N+G+ ++G+
Sbjct: 592 GYETLK---VVGSEPELKKARMALYHCARQVLNNGMRLLGL 629


>gi|149371672|ref|ZP_01891088.1| arginyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355299|gb|EDM43859.1| arginyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 593

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 13/133 (9%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY +AR +SI R+  +       D+    V  Q+   +  E +++  L ++P  IE A
Sbjct: 474 FIQYTFARIQSIIRKGNN-------DVTLSAVEIQDYSLEPKEKEVLKSLQQFPSTIELA 526

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y YDL   F+  + +      +    A N      R+ L  AV  +I +
Sbjct: 527 AANYSPAVIANYTYDLVKEFNSFYQN------VPIFSAENETEVKFRVALCAAVGDVIKT 580

Query: 573 GLNIIGVESPNEM 585
              ++G++ P  M
Sbjct: 581 AFGLLGIDVPERM 593



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 60  DPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P+ I E I  +  +D   + V F   KGF+N+ LS ++      ++      +G    G
Sbjct: 53  NPVQIGEAI-GQYLVDNVAEVVRFNVVKGFLNIVLSDAHFLDFFRNVPAWN-NFGVKPQG 110

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +   V +E+ S N   P+H+GH R  ++G ++A++   +G +V +   IND G  I
Sbjct: 111 E-EAVMVEYASPNTNKPLHLGHVRNVLLGYSVANITKAAGKKVYKTQIINDRGIHI 165


>gi|294878710|ref|XP_002768460.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239870913|gb|EER01178.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 388

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 150/391 (38%), Gaps = 95/391 (24%)

Query: 43  GHLSTNAAMILSRPLGLD-------PLTIAELIVARIKIDP--DVDSVFIAGKGFINLYL 93
           G    N AM L++    D       P  I E I + +  +   + +S  +A  GF+ + L
Sbjct: 41  GDYQCNNAMGLAKKFKSDLPDGMKIPKQIGEKIKSNLMEESPEEFESATVAPAGFVTVKL 100

Query: 94  SPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  ++ K L SS+V + I Y          V ++  S N    MHVGH R  ++G+T++ 
Sbjct: 101 SSGWIAKQLTSSVVENTITYWEE-----PSVIVDMSSPNIAKEMHVGHLRSTILGETVSR 155

Query: 153 LMAFSG--------------YEVTREYYINDAGAQINTLA-------------------L 179
           ++ +SG               +V R  ++ D G Q   L                    L
Sbjct: 156 ILEYSGNDVCNNIINRSSIDSQVQRINHVGDWGTQFGMLIEHMKDAYPDFLNHTPEVSDL 215

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             F++  +  ++ + D  +     V     G E A K            W  I  D S +
Sbjct: 216 QSFYKAAKKRFDEEPDFKKRSQEEVVALQSGDEYARK-----------AW-QICCDISRK 263

Query: 240 AMMKII-RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++  R  ++ L  Q + F +E          I  I++ L ++G V E          
Sbjct: 264 SFEEVYSRLGIEGLKEQGESFYNE---------MIGPIVEKLEKEGLVVES--------N 306

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMG 357
             KC       +F      DDV   ++KSDG Y Y + D+ A +    +   D ++Y+  
Sbjct: 307 GAKC-------IFTDV---DDVPMMVVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITD 356

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
                + K+L  VA      K  + ++L +L
Sbjct: 357 LGQEVHFKKLFEVA------KMAVGIILLKL 381


>gi|971336|emb|CAA90040.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 115

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 16/129 (12%)

Query: 459 ARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           AR  S+ RQ ++  + P  D D    + I  E E+D     L+  +  +P  +  A   +
Sbjct: 1   ARICSMLRQGEEQGLKPAADLDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKR 52

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+++  Y+YDLAS  H  ++        + +   N + +  RL L+ A    +N+ L +
Sbjct: 53  IPHRVTNYIYDLASALHSFYNAE------KVIDPENEEKSRARLALMKATQITLNNALQL 106

Query: 577 IGVESPNEM 585
           IGV +P +M
Sbjct: 107 IGVSAPEKM 115


>gi|145641732|ref|ZP_01797308.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273546|gb|EDK13416.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 158

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 15/173 (8%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++ VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +     
Sbjct: 1   MIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT---- 55

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +       P   + D  E  L + L ++   ++       P+ L  YLY+LA +F
Sbjct: 56  ---DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIF 111

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 112 SSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 158


>gi|295114635|emb|CBL35482.1| Arginyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 215

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 39/218 (17%)

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML--------WRKNSELLDFDFCK--- 441
           +DG P K   R G  + L H++DE+  +  R +           R+ +E++     K   
Sbjct: 12  KDGGPFK--TRDGGVMRLEHLIDEIDEEVYRKIQEKQRVPEEEMRRTAEMIGLAALKYGD 69

Query: 442 VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           +  Q+ ++ VF              ++QY   R +SI  +  ++     + L P  + P 
Sbjct: 70  LSNQATKDYVFDVDRFISFEGNTGPHIQYMVVRIKSILEKYGELMGGT-YSLSP--IRPA 126

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            SE   +E +L + L  +  V+E+A     P+++  Y+YDL+  F+  +         + 
Sbjct: 127 ASE---TEKKLQLELCRFGEVVESAFAETAPHRICQYMYDLSDAFNNFYLVN------KI 177

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   +R+     + L+     ++N+ ++++G+E+P  M
Sbjct: 178 IGEEDREKQAGFISLISLTKDVLNACMDLLGMEAPEHM 215


>gi|67587705|ref|XP_665270.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis TU502]
 gi|54655858|gb|EAL35040.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis]
          Length = 505

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           K  KV ++F S N    MHVGH R  ++GDT + ++ + G+EV R  ++ D G Q   L
Sbjct: 19  KTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTSRILEYLGFEVLRVNHVGDWGTQFGML 77



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEF-----DTSELQLIV 500
           K N   Y+ YAYAR  +IFR+ + I  D +       VI Q+ S F     +  E +L +
Sbjct: 373 KGNTAVYLLYAYARICAIFRKVEFIQSDDNM------VIKQKVSNFKLKISNNVERKLSI 426

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +P V +       P +LA Y Y+L+  F   ++        R +    ++L   RL
Sbjct: 427 QLLRFPEVFDGILNDFFPNRLADYCYELSESFAQFYTE------CRIIGLEEQQLEQSRL 480

Query: 561 QLVHAVASIINSGLNIIGVES 581
            L      I+  GL+++GVE+
Sbjct: 481 LLCFLTKQILLKGLDLLGVET 501


>gi|326484474|gb|EGE08484.1| arginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 632

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116
           G++P  +AE I ++   +P + S   A   FI L  SP  L K IL  I      YG N 
Sbjct: 83  GVNPKQLAEDIASKFPSNPLL-SQPTANGIFIPLSFSPDTLPKLILPFIFDRRASYGSNQ 141

Query: 117 I-----------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
           +           GK  KV IEF S N     H GH R  ++G  +++L    G++V +  
Sbjct: 142 LQGLRDPHDQSSGK-KKVIIEFSSPNIAKEFHAGHLRSTIIGAYISNLYESMGWDVIKVN 200

Query: 166 YINDAGAQINTLALSVFWR 184
           Y+ D G Q   LA  V W+
Sbjct: 201 YLGDWGKQFGLLA--VGWQ 217


>gi|213962519|ref|ZP_03390781.1| arginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954845|gb|EEB66165.1| arginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 597

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           L R +  +P+ I E I   +K    ++ + F   KGF+NL ++ +Y    L+ I     +
Sbjct: 47  LLRHIKGNPVQIGEQIGTYLKEKAGNLVTDFNVIKGFLNLVIADTYYLNFLTEIK-DNPQ 105

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G         + +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G
Sbjct: 106 FGLATPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 165

Query: 172 AQI 174
             I
Sbjct: 166 IHI 168



 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR +SI R+  +     +        + Q       E  L+  +  +P ++++A
Sbjct: 477 FIQYTYARIQSILRKYAETNNSKEI------TVIQPDALQEKEKNLLKSITLFPSIVQDA 530

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
                P  +A Y+YDL   F+  + +    G E+       AN R     R+ L   +  
Sbjct: 531 ADNYSPAVVANYVYDLVKDFNSFYQNVSILGEED-------ANKRHF---RVALSKKIGE 580

Query: 569 IINSGLNIIGVESPNEM 585
           II     ++G++ P  M
Sbjct: 581 IIAESFKMLGIQVPERM 597


>gi|126654469|ref|ZP_01726200.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589066|gb|EAZ83286.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 314

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 69/298 (23%)

Query: 324 LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           + K+DG+  Y   DLA   Y + +Y+   + + YV+G++ + + K+L  V   +    A+
Sbjct: 50  ITKTDGATLYATRDLAAAFYRQQQYQP--NKIFYVVGNEQTLHFKQLFQVIEKMGYSWAK 107

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
            ++       + +DG   KMS R G  + L  V+ E                        
Sbjct: 108 -DLQHVPFGMMLKDGK--KMSTRKGKVVLLADVLAEAIATAKRNIEDKNPYLQQKERVAQ 164

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPD 474
            VG  +V F  L  K   L D +F   +  + E     YVQY YAR  SI   AK   P 
Sbjct: 165 QVGVGAVIFNDL--KYHRLNDIEFSIEQMMNFEGETGPYVQYTYARICSIL--AKGDVPS 220

Query: 475 --LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
               F    ++  P           +I+ L ++P+V++ A    +P  +A Y   LA + 
Sbjct: 221 HIKTFAPLGQHAWP-----------IILLLEQFPKVVDTAFNQADPSIIAKYALQLARLL 269

Query: 533 HGHWSHGRENPRLRFVQANNRKLT-----MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++             AN + LT       RL L H VA ++   L ++G+ESP  M
Sbjct: 270 NKYY-------------ANQKILTDDAQQASRLALCHCVAIVLKESLALLGIESPENM 314


>gi|326469809|gb|EGD93818.1| arginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326485237|gb|EGE09247.1| arginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 646

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      ++   + G      Y        ++ SI+ +   YG N  
Sbjct: 82  GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 141

Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                     KG K V +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 142 VGLRDQRDASKGKKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 201

Query: 168 NDAGAQINTLA 178
            D G Q   LA
Sbjct: 202 GDWGKQYGLLA 212



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 62/297 (20%)

Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+A   +   E  FD MIYV+ +    ++ +L      V +K     
Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKDLANR 436

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431
              CE +     GM   MS R G    L  ++ +VG      M   +KN           
Sbjct: 437 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQAKYEQIEDPV 487

Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472
             +++L      V++ S           EN          Y+QYA+AR  S+ R+A +I 
Sbjct: 488 ATADILGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIK 546

Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           P+     D  L            ++  + L+  LA++P V+ NA+   EP  +  YL+ +
Sbjct: 547 PEELGSADLSLLT----------ESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 596

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +    +        +  V  +  ++ M R+ L  +   ++++G+ ++G+     M
Sbjct: 597 THMLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKRM 646


>gi|110750821|ref|XP_624685.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 508

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 44/290 (15%)

Query: 96  SYLRKILSSIVVS-GIEYGRNLIG-------KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +Y  KI+S++ V    E   N  G           + +EF S N   P H+GH R  ++G
Sbjct: 23  AYRHKIMSNLYVKFNKEIESNCFGITPPLLIDNKNIIVEFSSLNIAKPFHIGHLRSTIIG 82

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           + +A+L +F   +VT+  Y+ D G Q   + L +       +    + +   Y   V   
Sbjct: 83  NCIANLNSFLHNQVTKINYLGDWGTQFGYIYLGMKLSKIDNIEIQKNPIKTLYNVYVDAN 142

Query: 208 HVG------KELADKYSSELL---NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            +       KE A K   +L    N   + W   +K ++V  + KI     K L I  D 
Sbjct: 143 KLAENNPDMKEEAKKIFQQLELKDNVIHKNW-ETIKQFTVLELEKI----YKRLGIIFDQ 197

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E  +   +   I  +I+ +     +              K D   +++++    + +
Sbjct: 198 YDWESMYTIKN---INKVINTMEEMQLL--------------KLDNHNRKVIY----IDE 236

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRL 367
               P+LKSDG+  Y + D+A    ++E+  FD M Y++ +  S +   L
Sbjct: 237 QKSVPILKSDGTTLYLSRDIAAAIDRFEKNKFDAMYYIVENGQSDHFTNL 286


>gi|146298015|ref|YP_001192606.1| arginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189083534|sp|A5FND6|SYR_FLAJO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146152433|gb|ABQ03287.1| arginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 592

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 16/133 (12%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR +SI R+A       DFD   +  I +  E +   ++    +  +P VI+NA
Sbjct: 476 FIQYTYARIQSIIRKA-------DFDFSNKIEIEELHEKEKELVK---QIELFPEVIQNA 525

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y YDL   ++  +        +  +   +    + R+QL   VA +I S
Sbjct: 526 AQNHSPALIANYTYDLVKEYNSFYQS------VHILGEADLTKKIFRVQLSQKVAEVIKS 579

Query: 573 GLNIIGVESPNEM 585
             +++G+E P  M
Sbjct: 580 AFSLLGIEVPERM 592



 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAV 145
           GF+N+ +S SY     + I     ++G        K V +E+ S N   P+H+GH R  +
Sbjct: 80  GFLNIVISDSYYVDFFNGIK-DQKQFGFLSPNPEEKAVMVEYSSPNTNKPLHLGHVRNNL 138

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +G ++A ++  SG +V +   IND G  I
Sbjct: 139 LGYSVAEILKASGKKVYKTQIINDRGIHI 167


>gi|326776602|ref|ZP_08235867.1| DALR anticodon binding domain protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326656935|gb|EGE41781.1| DALR anticodon binding domain protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 360

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+RP GL  L I
Sbjct: 4   ADLSRTVLHAVRRAVDEDALRAPVPARVRVERSRPGGSGDYACAVALQLARPAGLPALEI 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--RKILSSIVVSGIEYGRN 115
           A ++  R+  +P V  V I G GF++  L    +  R +L ++   G+ YG  
Sbjct: 64  ARILRERVAAEPGVGRVEITGPGFLSFTLDAPAVGDRAVLGAVREQGLGYGHG 116



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 14/189 (7%)

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           P+     AG+ +      + +G D+ R+ +L     +       ++  Q + NP+F V+Y
Sbjct: 186 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 238

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR R++ R A  +      D  P    P  + +D +   LI  +A++P V+  A   +
Sbjct: 239 AHARARALTRGATAL--GFTADAAPYGESP--APYDEAARPLIDLIADHPGVLLAAARHR 294

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P ++A     L +V H  +      P L             RL L  A  +++  GL++
Sbjct: 295 APDRVA---RQLEAVAHAFFDFHDSCPSLPAGDEKPSAAHRARLALAEAAGTVLAGGLSL 351

Query: 577 IGVESPNEM 585
           +G+ +P  +
Sbjct: 352 LGIRAPEHL 360


>gi|302498732|ref|XP_003011363.1| hypothetical protein ARB_02422 [Arthroderma benhamiae CBS 112371]
 gi|291174913|gb|EFE30723.1| hypothetical protein ARB_02422 [Arthroderma benhamiae CBS 112371]
          Length = 655

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 75/292 (25%)

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA-----AAVSEKKAQIN 382
           G+ TY   D+A    + E+  FD MIYV+ ++   Y +RL           V+ K   IN
Sbjct: 369 GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDVAAKLEHIN 428

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------S 432
                       G  + MS R G    L  ++DE GS     M   RKN          +
Sbjct: 429 F-----------GKVMGMSSRLGTVKILSDILDECGSAMHDVM---RKNPAKYEQIENPA 474

Query: 433 ELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ--- 467
           E+ D                     FD  K+   +    P  Y+QYA+AR  SI R+   
Sbjct: 475 EVADTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKVDI 532

Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +K+I    +F L            +   + ++  +A+YP V  NA    EP  +  YL+
Sbjct: 533 DSKEI-TTANFSLLK----------EPHAINILRLMAQYPDVTCNALKTLEPTTILTYLF 581

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
            LA      +        ++ + A + ++T+ RL L      ++ +G+ ++G
Sbjct: 582 RLAHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENGMRLLG 627



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 35/173 (20%)

Query: 38  RDCAHGHL-----STNAAMILS----RPLGLDPLTIAELIVARIKI-----DPDVDSVFI 83
           +D A+G +     +TNA ++L     +  G++P  +AE IV++         P  + +FI
Sbjct: 54  KDTAYGAVQWANAATNADLMLITARLKLKGINPKQLAEDIVSKFPSTSLLRQPTANGIFI 113

Query: 84  AGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLI-----------GKGTKVNIEFVSAN 131
                  L   P  L K IL  I      YG N +           GK  KV IEF S N
Sbjct: 114 P------LSFCPDTLPKLILPFIFDRRASYGSNSLQGLRNPHDQSAGK-KKVIIEFSSPN 166

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
                H GH R  ++G  +++L    G++V +  Y+ D G Q   LA  V W+
Sbjct: 167 IAKEFHAGHLRSTIIGAYISNLYESMGWDVVKVNYLGDWGKQFGLLA--VGWQ 217


>gi|115965891|ref|XP_001186294.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 428

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG-RNLIGKGTKVNI 125
           I  +I     V ++ +  KG +   L P ++ +++L  +      YG +   G  +K+NI
Sbjct: 83  IAKKITCPEHVQNISVE-KGVLYFSLDPQFIVKQVLQDVSEQQGCYGYQQYPGIESKLNI 141

Query: 126 --EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             E+ S N   P H GH R  ++G+ LA+L    G+ VTR  Y+ D G Q   L +
Sbjct: 142 IVEYSSPNIAKPFHAGHLRSTLIGNFLANLQESLGHNVTRINYLGDWGTQFGILGV 197


>gi|115644319|ref|XP_792125.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 408

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG-RNLIGKGTKVNI 125
           I  +I     V ++ +  KG +   L P ++ +++L  +      YG +   G  +K+NI
Sbjct: 63  IAKKITCPEHVQNISVE-KGVLYFSLDPQFIVKQVLQDVSEQQGCYGYQQYPGIESKLNI 121

Query: 126 --EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             E+ S N   P H GH R  ++G+ LA+L    G+ VTR  Y+ D G Q   L + 
Sbjct: 122 IVEYSSPNIAKPFHAGHLRSTLIGNFLANLQESLGHNVTRINYLGDWGTQFGILGVG 178


>gi|295674131|ref|XP_002797611.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226280261|gb|EEH35827.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 584

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 77  DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNI 125
           D+ +  IA    I  +  P  L K ++ +I  +   YG N  +G        KG K + +
Sbjct: 100 DLINTPIAVGTHIQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKGKKKIIV 159

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA      Y
Sbjct: 160 EFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVVKMNYLGDWGKQYGLLANG----Y 215

Query: 186 QQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           ++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 216 EK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 246


>gi|225011678|ref|ZP_03702116.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004181|gb|EEG42153.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 595

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111
           L R +   P  +AE I   +  +  +   F   KGF+NL LS   Y+ +      +S  E
Sbjct: 48  LLRQVKARPEIVAEEIGNYLVSNLSIVEGFNVVKGFLNLVLSDLFYINQFSEFYKIS--E 105

Query: 112 YGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           YG   +   +  V +EF S N   P+H+GH R  V+G ++A ++  +G  V +   IND 
Sbjct: 106 YGHTSVTDSSPTVMVEFSSPNTNKPLHLGHIRNNVLGYSVAKILEANGKRVIKTQIINDR 165

Query: 171 GAQI 174
           G  I
Sbjct: 166 GIHI 169



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 17/134 (12%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           ++QY +AR +++ ++A   F ++ +FD          S  D  E ++I  L  YP V+  
Sbjct: 478 FIQYTHARIKTLIQRAD--FQNIGNFDTL--------SILDQKEREVIKQLGNYPEVVTL 527

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P  +A Y+YDL   ++  + +         VQ N       R+ L   VA +I 
Sbjct: 528 AGAQYSPALIANYIYDLVKSYNTFYQNVSVLGSDNLVQKN------FRIALSQKVAEVIY 581

Query: 572 SGLNIIGVESPNEM 585
           +G  ++G+  PN M
Sbjct: 582 NGCGLLGINVPNRM 595


>gi|225684678|gb|EEH22962.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 720

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 77  DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNI 125
           D+ +  IA    I  +  P  L K ++ +I  +   YG N  +G        KG K + +
Sbjct: 175 DLINTPIAVGTHIQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKGKKKIIV 234

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA      Y
Sbjct: 235 EFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVIKMNYLGDWGKQYGLLANG----Y 290

Query: 186 QQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           ++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 291 EK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 321


>gi|226286772|gb|EEH42285.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 720

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 77  DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNI 125
           D+ +  IA    I  +  P  L K ++ +I  +   YG N  +G        KG K + +
Sbjct: 175 DLINTPIAVGTHIQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKGKKKIIV 234

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA      Y
Sbjct: 235 EFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVIKMNYLGDWGKQYGLLANG----Y 290

Query: 186 QQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           ++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 291 EK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 321


>gi|261195450|ref|XP_002624129.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239588001|gb|EEQ70644.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239610510|gb|EEQ87497.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 568

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            + +E G  ++    K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y
Sbjct: 63  TNSLEKGDLVLAGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLHTVMGWDVVKMNY 122

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
           + D G Q   LA      Y++  Y N+ +L   P  +   VY+K + K++A++
Sbjct: 123 LGDWGKQYGLLANG----YEK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 168


>gi|295698518|ref|YP_003603173.1| arginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157341|gb|ADD79786.1| arginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 584

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 47/290 (16%)

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV-------KRLEAVAAAVSEK 377
           KSDG Y Y   ++A  K + ++   D ++Y + S    ++       K+   V   V  +
Sbjct: 312 KSDGGYLYTTTEIACLKYRCQKLKADRILYYVDSRQKRHLQQSWIIAKKAGYVEENVKLE 371

Query: 378 KAQINVLLCELVRLYR--DGMPIKMSK-------RAGDFITLR-----------HVVDEV 417
             QI ++L +  + +R   G  +K+ +       +A  FI+ +            +  ++
Sbjct: 372 HHQIGMILGKDKKPFRTRSGKNVKLFEILEKSIIKAKQFISEKGLKNSRKRNILKIARKI 431

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  SV++  L +       F++  +      N   Y+QY Y+R  S+ +++K        
Sbjct: 432 GIGSVKYSDLSKNRKTDYIFNWSTI-FSFIGNTASYIQYTYSRANSLIKKSK-------- 482

Query: 478 DLFPRNVIPQESEFDTSELQLIV--HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                N I  E+   T+  + I+  HL  +  +++  +    P  L  YLY L++ F   
Sbjct: 483 --MNLNEIKDETFIATNSYEKIISMHLLRFVEILQETSQKGLPNILCNYLYRLSNEFSKF 540

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    EN  +  VQ   RK    RL+LV+     I  GLN++G+++ ++M
Sbjct: 541 Y----ENCSIINVQDKTRKKN--RLKLVYLTKITIKIGLNLLGIQTISKM 584



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 8/104 (7%)

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
           I+P+  +VF+  K +IN  +      K LS+I     E  +N++       I++ S N  
Sbjct: 79  IEPNFINVFLEEK-WINQQIDCMLSEKYLSTIRSENTE--KNMV-----TIIDYSSPNIA 130

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             MHVGH R  ++GD++  +  F G ++ +  +I D G     L
Sbjct: 131 KNMHVGHLRSTIIGDSIVRISKFLGKKIIKVNHIGDWGTHFGML 174


>gi|226324687|ref|ZP_03800205.1| hypothetical protein COPCOM_02473 [Coprococcus comes ATCC 27758]
 gi|225207135|gb|EEG89489.1| hypothetical protein COPCOM_02473 [Coprococcus comes ATCC 27758]
          Length = 422

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 71/380 (18%)

Query: 241 MMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +M +   DLK     LN++ D++  E D  +  P    D+++ L ++GY +         
Sbjct: 79  IMNVSVTDLKKNYANLNVEFDLWKGESDAQKYIP----DMVERLKKEGYAH--------- 125

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DN 351
                  +D   L+       D  + P   +LKSDG+  Y   DLA    + E  F  + 
Sbjct: 126 -------IDNGALVVDVKEETDTKEIPPCIILKSDGAALYDTTDLATL-VEREELFQPNE 177

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITL 410
           +IYV+      +  ++   A      K    +       +  +DG P K   R G  + L
Sbjct: 178 VIYVVDKRQELHFVQVFRCAKKTGIVKEDTKLTFLGFGTMNGKDGKPFKT--REGGVMRL 235

Query: 411 RHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF------- 452
            +++ E+       +   R  SE           +    +  +  Q+ ++ VF       
Sbjct: 236 ENLIREITEKMYEKITENRTVSEEEAKATAKMVGMAAIKYGDLSNQAAKDYVFDVDRFTS 295

Query: 453 -------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
                  Y+ Y   R +SI  + K+    +D D+    ++   SE   SE  L++  A++
Sbjct: 296 FEGNTGPYILYTIVRIKSILNKYKESGKSMD-DI---KILSATSE---SEKALMLEAAKF 348

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+EN      P+K+  Y+YDLA+ F+  +         + +   + +     + L+  
Sbjct: 349 GSVMENVYEELAPHKICAYIYDLANAFNRFYHE------TKILAEEDEQKQKSYIALLTL 402

Query: 566 VASIINSGLNIIGVESPNEM 585
              I+ + ++++G E+P  M
Sbjct: 403 TRDILTTCIDLLGFEAPERM 422


>gi|302508940|ref|XP_003016430.1| hypothetical protein ARB_04719 [Arthroderma benhamiae CBS 112371]
 gi|291180000|gb|EFE35785.1| hypothetical protein ARB_04719 [Arthroderma benhamiae CBS 112371]
          Length = 748

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      ++   + G      Y        ++ SI+ +   YG N  
Sbjct: 142 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 201

Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                     KG K + +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 202 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 261

Query: 168 NDAGAQINTLA 178
            D G Q   LA
Sbjct: 262 GDWGKQYGLLA 272



 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 22/131 (16%)

Query: 453 YVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           Y+QYA+AR  S+ R+A +I P+     D  L            ++  + L+  LA++P V
Sbjct: 631 YLQYAHARVCSVTRKA-EINPEELGSADLSLLT----------ESHAVDLVRLLAQWPDV 679

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + NA+   EP  +  YL+ +  +    +        +  V  +  ++ M R+ L  +   
Sbjct: 680 VFNASKTLEPCTILTYLFRMTHMLSSGYD-------VLKVVGSEPEVKMARMALYESARQ 732

Query: 569 IINSGLNIIGV 579
           ++++G+ ++G+
Sbjct: 733 VLHNGMRLLGL 743


>gi|198430377|ref|XP_002126846.1| PREDICTED: similar to arginyl-tRNA synthetase 2, mitochondrial
           [Ciona intestinalis]
          Length = 526

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 188/460 (40%), Gaps = 95/460 (20%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ I+F S N     HVGH R  V+G+ +++++  +G+EV R  Y+ D G Q   +AL  
Sbjct: 65  KIVIDFSSPNIAKTFHVGHYRSTVIGNFISNILKAAGHEVCRINYLGDWGLQFALIALG- 123

Query: 182 FWRYQ-QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP---EEKWLPIVK--- 234
           F +Y    L   D   P  +   VY+         K SSE  N P   EE     +K   
Sbjct: 124 FQKYGCHTLLRKD---PLTHLFDVYV---------KISSESKNNPDVLEEANTIFLKMEN 171

Query: 235 -DYSVQAMMKIIRD-DLKALNIQHD-IFISEDDFHRGDPSPIRD----IIDNLARQGYVY 287
            D  V     +IR   LK     +D I IS D++     S  RD    II NL +   + 
Sbjct: 172 NDKKVMEFWDLIRKVSLKEYRKLYDKINISFDEY--NGESEYRDKAKWIISNLQQASLL- 228

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR--PLLKSDGSYTYFAADLAYFKCKY 345
                   +    K  MD    L  S  + +  +    L +++G+  Y + D+A    ++
Sbjct: 229 --------TNVNGKICMD----LSNSDWLDNTPNHTATLARANGTTVYLSRDVAAAIHRH 276

Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-GMPIKMSKR 403
           +   FD  IY+   +   + ++L A+   +  K A+ +    E   +++  G   KM  R
Sbjct: 277 DVHKFDRSIYITDENQRFHFQQLFAILDKMGYKWARRS----EGRLVHKTFGRISKMQTR 332

Query: 404 AGDFITLRHVVDEV--------------------GSDSVRFMMLWRKNSELLDFDF-CKV 442
            G+ +    ++DE                      ++ V+ + L    S LL  DF  K+
Sbjct: 333 KGEVVFFTDILDEAMEKLKTDRQQHGTRKRDIKNENEVVKLLAL----SGLLCHDFKAKL 388

Query: 443 KE----------QSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEF 491
            +           SK     ++QY + R  S+       +   +D      NV+ Q  + 
Sbjct: 389 HKGYAFSWTAVLSSKGFTGLFLQYTHCRLCSLEENCGVPLVSCIDI-----NVLEQYQDM 443

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               + +I HL+ Y  V++ A ++ EP  +  YL+ L+ +
Sbjct: 444 ----VNIIQHLSCYSEVVKAAYVSLEPSYVLKYLFHLSHL 479


>gi|327303838|ref|XP_003236611.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326461953|gb|EGD87406.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 646

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      ++   + G      Y        ++ SI+ +   YG N  
Sbjct: 82  GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 141

Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                     KG K + +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 142 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 201

Query: 168 NDAGAQINTLA 178
            D G Q   LA
Sbjct: 202 GDWGKQYGLLA 212



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 62/297 (20%)

Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+A   +   E  FD MIYV+ +    ++ +L      V +K     
Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKDLANR 436

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431
              CE +     GM   MS R G    L  ++ +VG      M   +KN           
Sbjct: 437 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQAKYEQIEDPV 487

Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472
             +++L      V++ S           EN          Y+QYA+AR  S+ R+A +I 
Sbjct: 488 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIN 546

Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           P+     D  L            ++  + L+  LA++P V+ NA+   EP  +  YL+ +
Sbjct: 547 PEELGSADLSLLT----------ESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 596

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +    +        +  V  +  ++ M R+ L  +   ++++G+ ++G+     M
Sbjct: 597 THMLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKRM 646


>gi|302338315|ref|YP_003803521.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635500|gb|ADK80927.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 593

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P  L+++ S        YG+  +  G K+ IEF   N   P+H+GH R   +G++++ 
Sbjct: 106 MMPGLLKQVFSEAEA----YGKTDLYAGEKIMIEFSCPNTNKPLHLGHLRNDALGESVSR 161

Query: 153 LMAFSGYEVTREYYINDAGAQI--NTLALSVF 182
           ++  +G +V +   IND G  I  + LA SVF
Sbjct: 162 ILKANGADVRKVNLINDRGIHICKSMLAYSVF 193



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 41/283 (14%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-- 380
           LL+SDG+  Y   D+     ++ +  F  +IYV+ S+   + K L  V   +    A+  
Sbjct: 319 LLRSDGTTLYLTQDIGTAIARHGDWPFKRLIYVVASEQQYHFKVLFHVLKKLGFDWAENL 378

Query: 381 -------INV-----------------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                  +N+                 L+ EL  +      IK   R GD   +    + 
Sbjct: 379 YHLSYGMVNLPEGKMKSREGTVVDADDLIAELSSMA--AAEIKTKGREGDVGDVEKTAEA 436

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  ++ + +L    ++ + FD  K       N   Y+QY  AR  S+ R+ ++      
Sbjct: 437 VGLAALNYYLLQISPAKDMIFD-PKESISFNGNTGPYLQYMGARISSMLRKFEE-----R 490

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D F    +         E +LI  ++ +P  +  A     P  +  YLYDL+  F  ++
Sbjct: 491 SDEFKGATVDPSLITTIEERELIKLISLFPEKVAQAGAEFNPSIVTTYLYDLSRTFSRYY 550

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                    + +  +++ L   RL L   V  ++ +   ++G+
Sbjct: 551 HDN------QILNNDDKNLAFTRLSLAKGVLQVLKNAYWLVGI 587


>gi|330883273|gb|EGH17422.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 224

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 25/158 (15%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +   VG  +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+  
Sbjct: 80  LRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL- 137

Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                  FD     ++   PQE E       L   LA++   + N      P+ L  YLY
Sbjct: 138 ----GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLY 186

Query: 527 DLASVFHGHWSH----GRENP-----RLRFVQANNRKL 555
           DLA +F   + +    G ENP     RLR      R L
Sbjct: 187 DLAGLFSSFYENCPILGAENPDQQQSRLRLAALTGRTL 224


>gi|302661515|ref|XP_003022425.1| hypothetical protein TRV_03489 [Trichophyton verrucosum HKI 0517]
 gi|291186368|gb|EFE41807.1| hypothetical protein TRV_03489 [Trichophyton verrucosum HKI 0517]
          Length = 705

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      ++   + G      Y        ++ SI+ +   YG N  
Sbjct: 142 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 201

Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                     KG K + +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 202 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 261

Query: 168 NDAGAQINTLA 178
            D G Q   LA
Sbjct: 262 GDWGKQYGLLA 272



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 119/291 (40%), Gaps = 62/291 (21%)

Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+A   +   E  FD MIYV+ +    ++ +L      V +K     
Sbjct: 437 VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKDLANR 496

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431
              CE +     GM   MS R G    L  ++ +VG      M   +KN           
Sbjct: 497 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQAKYEQIEDPV 547

Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472
             +++L      V++ S           EN          Y+QYA+AR  S+ R+A +I 
Sbjct: 548 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIN 606

Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           P+     D  L            ++  + L+  LA++P V+ NA+   EP  +  YL+ +
Sbjct: 607 PEELGSADLSLLT----------ESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 656

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
             +    +        +  V  +  ++ M R+ L  +   ++++G+ ++G+
Sbjct: 657 THMLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGL 700


>gi|323436087|ref|ZP_01050304.2| arginine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|321496402|gb|EAQ38703.2| arginine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 670

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 14/133 (10%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY Y R ++I R+AK++      +   R++ P+E E       LI  + +YP  I+ A
Sbjct: 552 FIQYTYVRIQAILRKAKELNVPASVE-GARDLHPKEKE-------LIKLVQDYPATIQLA 603

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              + P  +A Y YDL   ++  +       +++ +  +N      R+ L   V  +I S
Sbjct: 604 AAQKSPAIIANYTYDLVKEYNSFFQ------QVQILGTDNVADQSFRVALSKEVGQVIES 657

Query: 573 GLNIIGVESPNEM 585
              ++G++ P  M
Sbjct: 658 AFGLLGIDVPERM 670



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I E +VA++    +  + F   KGF+NL ++ ++     + I  +   +G+     G  V
Sbjct: 88  IGEYLVAQV----EEITAFNVVKGFLNLVVADAFYMNAFAEIQATE-NFGKTPEA-GKAV 141

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+ S N   P+H+GH R  ++G +++ ++  +G +V +   IND G  I    L+  W
Sbjct: 142 MVEYSSPNTNKPLHLGHVRNVLLGYSVSEIIKAAGSKVYKTQIINDRGIHICKSMLA--W 199

Query: 184 -RYQQALYNNDSDLP-----EGYY---PGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIV 233
            RY        + L        YY     V+ K   K L +D+  S+     E +   I+
Sbjct: 200 ERYGNGETPESTGLKGDKLVGNYYVKFESVFQKEYTKWLTSDEGLSKFQELKETQLDKIL 259

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           K+     ++ I   D+K LN    I +SE+D  +G
Sbjct: 260 KE-----VVSIESKDVK-LNKHLAIEVSEEDLRKG 288


>gi|328885051|emb|CCA58290.1| arginyl tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 320

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R+ +ER R    G  +++ A+ L+RP G   L +A ++  R++  P +  V + G GF+N
Sbjct: 30  RVKVERARPGGTGEYASSIALTLARPSGRTALDVAGILQERLRDVPGLREVAVTGPGFLN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L      +++ +I  +G  YG      GT V +  V+            R  +VG T+
Sbjct: 90  FVLGRDSGAELVHAIREAGTSYGSGTALAGTVVRLAEVT----------ESRALLVGRTV 139

Query: 151 ASLMAFSGYEVT 162
             L+   G +  
Sbjct: 140 LRLLRSQGADAA 151


>gi|332880010|ref|ZP_08447694.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682006|gb|EGJ54919.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 595

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
           L R +  +P+ I E I   +K    ++ S F   KGF+NL ++ SY    L  I      
Sbjct: 47  LLRHIKGNPVQIGEQIGDYLKKHAGNLVSDFNVIKGFLNLVIADSYYIDFLDQIR-ENKH 105

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G         + +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G
Sbjct: 106 FGLAAPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 165

Query: 172 AQI 174
             I
Sbjct: 166 IHI 168



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 24/138 (17%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           +VQY YAR +SI R+  ++       +     +P        E  L+  +  +P +++ A
Sbjct: 477 FVQYTYARIQSILRKYAEM------GVADSTAMP--DTLHEKEKALLKSITLFPAIVQEA 528

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSH----GRENP-RLRFVQANNRKLTMMRLQLVHAVA 567
                P  +A Y+YDL   F+  + +    G + P +L F           R+ L   + 
Sbjct: 529 AEEYSPAVIANYVYDLVKDFNSFYQNVSILGEKEPVKLHF-----------RVVLCEKIG 577

Query: 568 SIINSGLNIIGVESPNEM 585
            II +   ++G++ P  M
Sbjct: 578 EIIAASFKMLGIQVPERM 595


>gi|323463592|gb|ADX75745.1| arginyl-tRNA synthetase 2 [Staphylococcus pseudintermedius ED99]
          Length = 554

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 87  GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           GF+N +L   S  +KI+     + ++   N +    K+ I++ S N   P  +GH R  V
Sbjct: 77  GFLNFFLDRQSSSQKIIECFNENTLK--NNKLLSAEKIVIDYSSPNIAKPFSMGHLRATV 134

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNN 192
           +GD++A ++  +G +V R  ++ D G Q   L ++   W  Q+ + NN
Sbjct: 135 IGDSIAKILEANGAKVIRINHLGDWGTQFGKLIVAYKKWGEQKRVENN 182


>gi|330807100|ref|YP_004351562.1| arginine--tRNA ligase (arginyl-tRNA synthetase), C-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375208|gb|AEA66558.1| Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), C-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 332

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR +   VG D+V++  L +  +    F+F  +    + N   Y+ YAY R   +FR+  
Sbjct: 173 LRKIAKVVGIDAVKYADLSKHRTSDYSFNF-DLMLNFEGNTAPYLLYAYTRVAGVFRKLG 231

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F ++D  +      P E E       L   LA++  V+ N      P+ L  YLYD+A
Sbjct: 232 KSFNEVDGQIVLE--APHEQE-------LAAKLAQFGEVLNNVADKGTPHTLCAYLYDVA 282

Query: 530 SVFHGHWSH 538
            +F   + +
Sbjct: 283 GLFSSFYEN 291


>gi|312374379|gb|EFR21944.1| hypothetical protein AND_15986 [Anopheles darlingi]
          Length = 612

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           KG++ + +EF S N   P H GH R  ++G+ +A++  F G  V R  Y+ D G Q   L
Sbjct: 40  KGSQTIVVEFSSPNIAKPFHAGHLRSTIIGNFIANVNEFLGQRVVRLNYLGDWGTQFGYL 99

Query: 178 ALSV 181
           AL V
Sbjct: 100 ALGV 103


>gi|195359293|ref|XP_002045339.1| GM21064 [Drosophila sechellia]
 gi|194129328|gb|EDW51371.1| GM21064 [Drosophila sechellia]
          Length = 499

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 48/304 (15%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
           R  +V D    P++KSDGS  Y A D+A    +  R  F  ++YV+ +  + +   L   
Sbjct: 214 REIVVVDGRRIPVIKSDGSTLYLARDIAALLERLSRFQFSRLLYVVDNGQADHFNALFKT 273

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS---DSVRFMML 427
            AA+ ++      L  E ++  + G    MS R G  I L+ V+DE  S   +       
Sbjct: 274 TAALDDR------LSLEQLQHVKFGRIQGMSTRQGKAIFLKDVLDEARSIMREKRNLSAT 327

Query: 428 WRKNSELLDFDFCKV-----------KEQSKENPVFYVQYA------------YARCRSI 464
            R+N  L D   C +           K++ + +  F  Q A            Y  CR  
Sbjct: 328 TRENYNLDDEHVCDILGVSAVLINVLKQRRQRDHEFSWQQALQVNGDTGIKLQYTHCR-- 385

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKL 521
                D F D+D D    ++ P    F T     L L+  LA + + +  +    E   L
Sbjct: 386 LHSLLDNFRDVDLD----DIKPDWKHFATEPADALDLLYALARFDQSVWQSKEQLEACVL 441

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL+ L +      +  R   RL   Q ++ +  + RL L +A    +  G+ ++G+  
Sbjct: 442 VNYLFGLCN------ATSRALKRLPVKQESSLERQLQRLLLFNAAKKTLRQGMELLGLRP 495

Query: 582 PNEM 585
            ++M
Sbjct: 496 LDQM 499


>gi|302658722|ref|XP_003021062.1| hypothetical protein TRV_04838 [Trichophyton verrucosum HKI 0517]
 gi|291184938|gb|EFE40444.1| hypothetical protein TRV_04838 [Trichophyton verrucosum HKI 0517]
          Length = 636

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 25/173 (14%)

Query: 33  VIERPRDCAH-----GHLSTNAAMILS----RPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           ++E  +D A+      + +TNA ++L     +  G++P  +AE IV++      + S   
Sbjct: 49  LVECDKDTAYDAVQWANAATNADLMLITARLKLKGINPKQLAEDIVSKFP-STSLLSQPT 107

Query: 84  AGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLI-----------GKGTKVNIEFVSAN 131
           A   FI L   P  L K IL  I      YG N +           GK  KV IEF S N
Sbjct: 108 ANGIFIPLSFCPDTLPKLILPFIFDRRASYGSNPLQGLRDPHDQSSGK-KKVIIEFSSPN 166

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
                H GH R  ++G  +++L    G++V +  Y+ D G Q   LA  V W+
Sbjct: 167 IAKEFHAGHLRSTIIGAYISNLYESMGWDVVKVNYLGDWGKQFGLLA--VGWQ 217



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 71/285 (24%)

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA-----AAVSEKKAQIN 382
           G+ TY   D+A    + E+  FD MIYV+ ++   Y +RL           V+ K   IN
Sbjct: 369 GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDVAAKLEHIN 428

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------S 432
                       G  + MS R G    L  ++DE GS     M   RKN          +
Sbjct: 429 F-----------GKVMGMSSRLGTVKILSDILDECGSAMHDVM---RKNPAKYEQIENPA 474

Query: 433 ELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470
           E+ D                     FD  K+   +    P  Y+QYA+AR  SI R+   
Sbjct: 475 EVADTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKV-- 530

Query: 471 IFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                  D+ P+ +         +   + ++  +A+YP V  NA    EP  +  YL+ L
Sbjct: 531 -------DIDPKEITTANFSLLKEPHAINILRLMAQYPDVTCNAVKTLEPTTILTYLFRL 583

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           A      +        ++ + A + ++T+ RL L      ++ + 
Sbjct: 584 AHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENA 622


>gi|55859659|emb|CAI10898.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 205

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 9/125 (7%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112
           SRP   D    A+ +  +++ D  V  +   G+  +N  ++   L K +L  ++  G +Y
Sbjct: 84  SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 139

Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ 
Sbjct: 140 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 199

Query: 169 DAGAQ 173
           D G Q
Sbjct: 200 DWGMQ 204


>gi|328708076|ref|XP_001946117.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 572

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 102/497 (20%), Positives = 192/497 (38%), Gaps = 97/497 (19%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+F S N   P HVGH R  ++G+ +++L  F    V R  Y+ D G Q     L +  +
Sbjct: 125 IDFSSPNIAKPFHVGHLRSTIIGNFISNLRNFIDGRVVRINYLGDWGPQFGYTLLGL-EQ 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +  +  N+  +   +   +    + K                       D S+    K 
Sbjct: 184 MKPDISKNNMTIESLHNAYILANQMAKN----------------------DSSIHDKAKS 221

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I +DL+  N   DI    ++F     + +  I     R G V++      K    +  D+
Sbjct: 222 IFNDLECGNSTSDINTLWNEFRSITINELEVI---YKRLGIVFDEYDWESKYSKEKIQDV 278

Query: 305 DRKQL----LFR------STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
             KQL    L +      + ++ ++ +  +LK+D S  Y   D+A    +++  G +++ 
Sbjct: 279 -LKQLSKIGLLKVKEDGSTVVLSNNQETTILKNDNSTLYITRDIAAALRRHKYYGSEDLF 337

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ +  S +   L+++ A ++   + INV      R++       MS R G  I L  +
Sbjct: 338 YVVDNTQSKHFYLLKSLIAQIN---SNINVHHIPFGRIH------GMSSRKGQGILLDQL 388

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFD-----------------FCKVKEQSKENPVFY--- 453
           +++  S     M+L RK SE    +                    +K++ K++  F    
Sbjct: 389 LNQAKST----MVLKRKYSETTKINSMDDNEVADVLGISAIVINDLKQKRKKDYNFSWES 444

Query: 454 ---------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                    ++  Y  CR +  +  +    L     P  VI  E   +T  L LI+ +  
Sbjct: 445 ALQVNGDTGIKLQYTHCRLLSLEEVNCNITL-----PDEVIA-ECFTETVALDLILEICR 498

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM--MRLQL 562
           +  V+       E   L  YL+ L++           N  L+ +   N   T+   R+ L
Sbjct: 499 FEDVLTETNQELEACILVNYLFRLSNCI---------NKALKVLNVKNSSSTIAQQRILL 549

Query: 563 VHAVASIINSGLNIIGV 579
            +     +++G+ I+G+
Sbjct: 550 FYRARETLSAGMKILGL 566


>gi|74185395|dbj|BAE30171.1| unnamed protein product [Mus musculus]
          Length = 397

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 38/300 (12%)

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G  V   ++KSDG YTY  +DLA  K + +E   + +IYV+ +  + + + + A A  + 
Sbjct: 105 GCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIG 164

Query: 376 -------------------EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI-- 408
                              E K +      E VRL     +G+   M K   +  D +  
Sbjct: 165 WYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLT 224

Query: 409 --TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
              L+     V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R
Sbjct: 225 EEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIAR 283

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            A     ++D  +  R     +   D   E +L   +  +P +++        + L  Y+
Sbjct: 284 LA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYI 338

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 339 YELATTFTEFYDSCYCVEKDR-QTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 397


>gi|170052268|ref|XP_001862145.1| arginyl-tRNA synthetase 2 [Culex quinquefasciatus]
 gi|167873170|gb|EDS36553.1| arginyl-tRNA synthetase 2 [Culex quinquefasciatus]
          Length = 228

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +EF S N   P H GH R  ++G+ LA+L    G++V R  Y+ D G Q   L L V
Sbjct: 106 KTLVEFSSPNIAKPFHAGHLRSTIIGNFLANLYDHLGHDVVRLNYLGDWGTQFGYLKLGV 165


>gi|218461787|ref|ZP_03501878.1| putative arginyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 184

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 13/150 (8%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G L  N  M L++  G +   +A  + A  + D   D V +AG GF+N  LS   +    
Sbjct: 35  GDLQCNEMMRLAKATGKNTHDLAASVAAAARNDV-FDEVSVAGPGFVNFRLSNETIAAEA 93

Query: 103 SSIV---VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           S+++     G E  R +     +  I+F   N    +HVGH R  V+G++L  +++  G+
Sbjct: 94  SAMLGDPALGAEKQRPI-----RTVIDFGGPNVAKALHVGHLRSFVIGESLRRILSEIGH 148

Query: 160 EVTREYYINDAGAQINTL----ALSVFWRY 185
           +V  + ++ D G Q+  L    A++  W++
Sbjct: 149 DVISDIHLGDWGLQMGKLLYGAAIASGWQH 178


>gi|83273903|ref|XP_729602.1| arginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23487879|gb|EAA21167.1| arginyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 1643

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 45/192 (23%)

Query: 43  GHLSTNAAMILSRPLGLD---------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           GH   N A+ + +  G +          L+I E I   +      D +  + +GFI + +
Sbjct: 37  GHFQCNNAINIYKKYGKELNFENAHKVSLSIIENINENL-----FDDINASPQGFITVKI 91

Query: 94  SPSYLRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           S  Y+ K L           ++ +  I  G N   K   V I+F S N    MHVGH R 
Sbjct: 92  SKDYIEKSLLKLYKNNKININVDMDEINDGNN--AKYENVLIDFSSPNIAKEMHVGHLRS 149

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-------------------ALSVFWR 184
            ++GD++  +  F   +  R  ++ D G Q   +                   +L++ ++
Sbjct: 150 TIIGDSICKIFEFLKVKTHRVNHVGDWGTQFGMIINYIITNYPNYKEEMPELKSLTLLYQ 209

Query: 185 YQQALYNNDSDL 196
             +  Y+ND D 
Sbjct: 210 EAKKCYDNDKDF 221


>gi|70952033|ref|XP_745212.1| arginyl-tRNA synthetase [Plasmodium chabaudi chabaudi]
 gi|56525464|emb|CAH75311.1| arginyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 523

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 26/173 (15%)

Query: 43  GHLSTNAAMILSRPLGLD---------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           GH   N A+ + +  G +          L+I E I   +      + +  + +GFI + +
Sbjct: 40  GHFQCNNAINIFKKYGKELNFENAHKISLSIIENINETL-----FEDINASPQGFITVKI 94

Query: 94  SPSYLRKILSSIVVSG---IEYGRNLIGKGT-----KVNIEFVSANPTGPMHVGHCRCAV 145
           S SY+ K L  +  +    I    N I  G       V I+F S N    MHVGH R  +
Sbjct: 95  SRSYIEKSLLKLYENNKINISVDMNEINDGNDAKFENVLIDFSSPNIAKEMHVGHLRSTI 154

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           +GDT++ +  F   +  R  ++ D G Q   +   V   Y     N   ++PE
Sbjct: 155 LGDTISKVFEFLKVKTHRVNHVGDWGTQFGMIINYVVTNYP----NYKEEMPE 203


>gi|295836506|ref|ZP_06823439.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
 gi|295826064|gb|EFG64651.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 324

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L++ ++E     +V + + +R+ +  PR   +G  + N A++ + P    PL +A L+  
Sbjct: 14  LRHAVRE-GAVAEVSEGVAERVTVAVPRPGGYGDYACNVALLAAGPARTSPLALAALLRE 72

Query: 71  RIKIDPDVDSVFIAGKGFINLYLS--PSYLRKILS 103
           R++ DP +  V + G GF+N  L+   SY R +++
Sbjct: 73  RLRHDPRLAEVRVTGPGFLNFRLAGPASYERDVVA 107



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 18/209 (8%)

Query: 379 AQINVLLCELVRLYR-DGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSEL 434
           A+ +VL   LVRL R  G   ++    G+ +           +  D+ R+ +L    +E 
Sbjct: 128 ARAHVLAEALVRLVRAQGGEARLDATGGEPLRAAPPYEATAPLDPDTRRWALLHTAPAER 187

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
              D   +  Q  ENP+F V+YA+AR R++ R A D+              P+  +    
Sbjct: 188 PRLD-AGLLVQRVENPLFLVRYAHARARALVRNAADL-----------GYGPEPGDSGPE 235

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L+  LAE+P V+  A   + P +LA  L  LA    G   H R    L         
Sbjct: 236 AAPLLALLAEHPAVLLRAAEHRAPDRLARRLVRLADALLGF--HDRTGGLLPLGGLKPLA 293

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPN 583
               RL L  A  +++  GL ++G+ +P 
Sbjct: 294 AHRARLALAEAAGTVLAGGLTLLGISAPQ 322


>gi|225683425|gb|EEH21709.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 609

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IER +  AHG    +  +I++R L L   +I +L    +   P   SVFI      N  +
Sbjct: 61  IERTQVLAHG----DVVLIVAR-LRLKGDSIGQLFALPLISCPSSKSVFIPIH--FNETI 113

Query: 94  SPSYL-------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
            P  +       R +      +G+   +N      KV +EF S N     H GH R  ++
Sbjct: 114 LPRLILPYIFDRRHLYGQDTSTGLRGAKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTII 173

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           G  ++ L    G++V +  Y+ D G Q   LA  V W+
Sbjct: 174 GAYISYLYGNMGWDVLKINYLGDWGKQFGLLA--VGWQ 209


>gi|158299141|ref|XP_319244.3| AGAP010086-PA [Anopheles gambiae str. PEST]
 gi|157014226|gb|EAA14606.3| AGAP010086-PA [Anopheles gambiae str. PEST]
          Length = 568

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 31/57 (54%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +EF S N   P H GH R  ++G+ L++L  F G  V R  Y+ D G Q   LAL V
Sbjct: 117 VEFSSPNIAKPFHAGHLRSTILGNFLSNLNEFLGNRVLRLNYLGDWGTQFGYLALGV 173


>gi|284042472|ref|YP_003392812.1| Arginyl-tRNA synthetase-like protein [Conexibacter woesei DSM
           14684]
 gi|283946693|gb|ADB49437.1| Arginyl-tRNA synthetase-like protein [Conexibacter woesei DSM
           14684]
          Length = 580

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 43/329 (13%)

Query: 63  TIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR------ 114
            +A+  V  ++ DP  D DSV    + F+  +           + + +G+E GR      
Sbjct: 50  ALADAAVEVLRADPALDADSVTQEQQRFLMRFTDARI------AELGAGLEEGRLPGMET 103

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             +  G +  ++F   N T  +H+GH R   +G  ++S +  +G  V R+ +I DAG  +
Sbjct: 104 RDLRAGERAIVDFCDPNATKALHIGHLRNIALGQAISSALRAAGAHVERQSHIGDAGRSM 163

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPG-VYLKHVGKE--LADKYSSELLNFPEEKWLP 231
              AL+ + RY +     ++ +    + G +Y ++  +E  +AD       + P  + L 
Sbjct: 164 GE-ALAGYRRYAEPGTPAEAGVKSDQFVGDLYARYAREESPIADVADE---DAPVARDLD 219

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              D + Q +  I +DD  A+ +   +        RG    +    + LAR G  +E IL
Sbjct: 220 ERDDLAQQLLTGIEQDDADAVALWRTV--------RG--WAVAGQNETLARLGVHFERIL 269

Query: 292 --PPPKSKTTQKCDMDRKQLLF----RST---MVGDDV--DRPLLKSDGSYTYFAADLAY 340
                 ++T +   +  ++ +F    R T   + GDD     PL ++DG  T+    +A 
Sbjct: 270 YDSDRTARTAEVARLGIERGVFVREERGTVAYLTGDDSYPVMPLTRADGFPTHHLRVVAM 329

Query: 341 FK-CKYERGFDNMIYVMGSDHSGYVKRLE 368
           ++    +     +I++ G +   +V+ +E
Sbjct: 330 WRDMMIDEEGSALIHLSGDEWKAHVQHVE 358


>gi|84998060|ref|XP_953751.1| arginyl-tRNA synthetase [Theileria annulata]
 gi|65304748|emb|CAI73073.1| arginyl-tRNA synthetase, putative [Theileria annulata]
          Length = 622

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 108/562 (19%), Positives = 219/562 (38%), Gaps = 128/562 (22%)

Query: 117 IGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +GK T   V +++ S N    +H+GH R   +G  +++L+ FSG +V R  ++ D G Q 
Sbjct: 96  VGKLTDETVLVDYFSPNVGKNLHMGHIRSLGLGQAISNLLDFSGSKVIRRNHVGDFGLQS 155

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---------KYSSE----- 220
                 +  RY   +   D+   E   P    +   +EL           +YS E     
Sbjct: 156 -----GIIMRY---IIEYDTRAMEALNPATCNRSFMRELFRYQQIGFSPLEYSYEYNTKN 207

Query: 221 -LLNFPEEKW---LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS----- 271
             L+FP   +   +  + DY   A  K   D   A   + + ++ +++    +P      
Sbjct: 208 LTLSFPLFAYGLVVDTIDDYYKLAFEKFSSDQEFARRAKIETYLLQNEKSFANPQWENVN 267

Query: 272 -----PIRDIIDNLARQGYVYEGILPPPKSK-------------TTQKCDMDRKQLLFRS 313
                   DI+D      Y  +G+   P+S                +K D + K++++  
Sbjct: 268 HISLVQYNDILDY-----YYIKGLKNIPESLYKNVTNRLIEELIKEKKVDQNDKEVVYTI 322

Query: 314 TMVGDDVDRP---------------LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYV 355
           +      ++P               L   +GS TY A DL      +  G+   D +IYV
Sbjct: 323 SKSSKQHNKPDNSDNVEVKKEDKTVLRTREGSLTYMATDLGAL--SHRIGWNKPDRIIYV 380

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKA-QINVL---------------------------LCE 387
             ++   + ++L  +      K A ++N+L                            C 
Sbjct: 381 TENNQKSHFQKLYTIIYVQLYKIAKKLNILKTCKMEHVGFGQIGLEGTGKIRSRTGNTCT 440

Query: 388 LVRLYRDGMPIKMSK--RAGDFITLRHVV--DEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +  + +  + +   K  + GD++ L+H +   ++G  S+ F  L  +     +F   ++ 
Sbjct: 441 IKDITKQVVELVTEKFVKRGDYLRLKHPIAARKIGVGSILFSDLSVEPKSGYNFSIERLM 500

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            Q   N +  + Y+Y R +SI  + + +         P+  IP     +  E +L + L 
Sbjct: 501 NQG-YNLLIAILYSYVRSKSILERCESL---------PQ--IPSNEFRNEYERKLGMLLL 548

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +  +I  +   +EP+++  YL +L+  F+  +    + P +      + K+  +  +LV
Sbjct: 549 GFENMIAASISMREPHRVCKYLTNLSKGFNQFY---EKTPVIV-----DDKVNSLSYKLV 600

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              +  I  GL+I+ +++  ++
Sbjct: 601 KMTSKAIEIGLDILNIQTVKQL 622


>gi|289672020|ref|ZP_06492910.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 236

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V IAG GF+N + + + L   L + +       R   G   +V ++  + N    MHVGH
Sbjct: 8   VEIAGPGFLNFFQNTAALAARLDAALADAHLSVRK-AGAAQRVVVDLSAPNLAKEMHVGH 66

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            R  ++GD +A+++ F G  V R+ ++ D G Q   L
Sbjct: 67  LRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGML 103


>gi|226324686|ref|ZP_03800204.1| hypothetical protein COPCOM_02472 [Coprococcus comes ATCC 27758]
 gi|225207134|gb|EEG89488.1| hypothetical protein COPCOM_02472 [Coprococcus comes ATCC 27758]
          Length = 178

 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           EK++    +  RP  C +     N AM  ++     P+ IAE +VA+I  +  +      
Sbjct: 32  EKELARVTLSNRPDLCEY---QCNGAMAGAKKYHKAPIMIAEEVVAKIPENGYISGAEAV 88

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             GFINL  +P+ +   L+ +     + G   +     + I++   N   P+HVGH R A
Sbjct: 89  KPGFINLKTNPAAVADYLNQMEADE-KLGVEEVENPKTIVIDYGGPNVAKPLHVGHLRSA 147

Query: 145 VVGDTL 150
           ++G+++
Sbjct: 148 IIGESV 153


>gi|307171176|gb|EFN63163.1| Probable arginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 391

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 57/316 (18%)

Query: 304 MDRKQLLF----RSTMVGDDVDR--PLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVM 356
           M++ QLL        +V  D D+  PL+KSDGS  Y A D+A    ++ER  FD M YV+
Sbjct: 99  MEKMQLLVTDEQNRKVVNLDNDKIIPLIKSDGSTLYIARDIAAAIDRFERNNFDCMYYVV 158

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +  + +   L  +         ++ V   E ++  R G    MS R G+ I L  +++ 
Sbjct: 159 DNTQAEHFSNLLEILR-------RMKVPWVERLKHIRFGRLHGMSTRKGNVIFLEDILN- 210

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKDIFPDL 475
               + R +M  ++    LD    K++  S +N    +  +      +  R+ +D   DL
Sbjct: 211 ----TTRDIMKQKQ----LDSCTTKIQLDSTDNSSDILGISAMIINDLKKRRQRDYTFDL 262

Query: 476 D--FDL-----------------FPRN---VIPQESE--FDTSEL--QLIVHLAEYPRVI 509
           +  FDL                   RN   V+P E E      E+  +LIV +A++  ++
Sbjct: 263 NAAFDLKGDTGVKLQYTHCRLINLKRNCGAVLPSECEPSLLREEVVDELIVLIAKFEEIV 322

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             +    EP  L  YL+ L+ V +  +   +       V+  +  +   RL L H   +I
Sbjct: 323 LKSYEEMEPCILTGYLFHLSHVINKAFKTLK-------VKNESSDVASQRLLLFHVARNI 375

Query: 570 INSGLNIIGVESPNEM 585
           +  G+ ++G+    EM
Sbjct: 376 LAQGMKLLGLMPLEEM 391


>gi|302536935|ref|ZP_07289277.1| predicted protein [Streptomyces sp. C]
 gi|302445830|gb|EFL17646.1| predicted protein [Streptomyces sp. C]
          Length = 316

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  +   ++      ++   + +R+V+ER R    G  ++  A+ +++   L+P  +
Sbjct: 4   ADLSRAVVQAVRRAVEGGELAAGVPERVVVERTRPGGVGEYASPVALQVAKSARLEPREV 63

Query: 65  AELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           A ++  R+  D P +  V I G GF+N  L+P     ++  + V G  YG
Sbjct: 64  ARVLAGRLLADEPGILGVEITGPGFLNFSLAPLSAAALVREVRVRGTRYG 113



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           V+++S E   F V+YA+AR R++   A D    L F   P    P     D     L+  
Sbjct: 186 VQDESSE--FFRVRYAHARARALGINAGD----LGFVSEPAE--PAGPGDDADGHGLLRL 237

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTM 557
           L EYP V+E A   Q P +L  +L  +A       H     G E P              
Sbjct: 238 LGEYPLVLEAAAHHQAPERLTRHLVAVADALLDFQHQVLPKGDEKPSAAHRARLALAEAA 297

Query: 558 MRLQLVHAVASIINSGLNIIGVESPN 583
                     +++  GL ++G+++P+
Sbjct: 298 ---------GTVLAGGLALLGIDAPD 314


>gi|126291425|ref|XP_001380293.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 358

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 42/296 (14%)

Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE----- 376
            ++KSDG YTY  +DLA  K +  E   D +IYV+ S  + + + +   A  +       
Sbjct: 72  TIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVDSGQAVHFQAIFVAAQMIGWYDPKV 131

Query: 377 ---KKAQINVLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRH 412
                A   V+L E              L+ L  +G+   M K   +  D +     L+ 
Sbjct: 132 TRVSHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTPEELKA 191

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               V    +R+  L         F F K+ +  + N   Y+ YA+ R RSI R A    
Sbjct: 192 AQTSVAFGCIRYADLSHNRMNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA---- 246

Query: 473 PDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            ++D ++  +     +   D   E +L   +  +P +++        + L  Y+Y+LA+ 
Sbjct: 247 -NIDEEMLQKAAKETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATT 305

Query: 532 FHGHW--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   +   +  E  R         K+ M R+ L  A A+I+  G +I+G++   +M
Sbjct: 306 FTEFYDSCYCVEKDR---QTGKILKVNMWRMLLCEATAAIMAKGFDILGIKPLQKM 358


>gi|313230750|emb|CBY08148.1| unnamed protein product [Oikopleura dioica]
          Length = 144

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +R+I+S I+  G    ++ I  G ++ ++F S N   P H+GH R  + G  + +L+   
Sbjct: 1   MRQIISEILKPG---WKSRIRTGKRIVVDFSSPNIAKPFHLGHLRSTITGQCVCNLLEAQ 57

Query: 158 GYEVTREYYINDAGAQ-INTLALS 180
           G+EV R  Y+ D  ++ IN L ++
Sbjct: 58  GHEVIRVNYLGDWESRAINQLTIA 81


>gi|145232355|ref|XP_001399626.1| arginyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
 gi|134056541|emb|CAK47665.1| unnamed protein product [Aspergillus niger]
          Length = 646

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 60/296 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372
           +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +            
Sbjct: 377 IVRKDGTPLYLTRDIGAILEREEAYKFDKMIYVVAAQQDLHLAQLFKITELMGYKDLASR 436

Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGS 419
                      +S +K  +   L ++++  RD M   M K    +  +       D +G 
Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILQDVRDKMHEVMKKNTEKYEQVADPEGTADILGM 495

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            SV    +  K     DF+   +   +    P  Y+QYA+AR  SI R++      L+ D
Sbjct: 496 SSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKS-----GLNVD 548

Query: 479 LFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLA 529
                      E DT+ L L+           LA++P V+ N T   EP  +  YL+ + 
Sbjct: 549 -----------ELDTANLSLLTETHATDLARLLAQWPDVLLNTTRTLEPTTILTYLFRMT 597

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V    +        +  V  +  +L   R+ L  +   ++++G+ I+G+   N M
Sbjct: 598 HVLSSSYD-------VLKVVGSEPELKKARMALYESARQVLHNGMRILGLSPVNRM 646



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           KG K + +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   L
Sbjct: 152 KGRKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLL 211

Query: 178 A 178
           A
Sbjct: 212 A 212


>gi|297192062|ref|ZP_06909460.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151179|gb|EFH30997.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 259

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 13/120 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + +ERPR    G  +T  A+ L+R  G   + +A  +  RI   P + +V I G GF+N+
Sbjct: 31  VKVERPRPGGRGDYATGIALRLARQAGRPAVEVAAELGHRIAAAPGIAAVDITGPGFLNI 90

Query: 92  YLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            L P   + ++  ++  G +YG  +L G      +E ++       +    R AV+ DTL
Sbjct: 91  TLEPDTQQGLVRDVLERGEKYGWTDLTGA-----VEEIT-------YRADVRAAVIADTL 138


>gi|167518127|ref|XP_001743404.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778503|gb|EDQ92118.1| predicted protein [Monosiga brevicollis MX1]
          Length = 586

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 43/332 (12%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF S N   P HVGH R  ++G+ L +++  +G  VT   Y+ D G Q+  + +     
Sbjct: 120 LEFSSPNIAKPFHVGHLRSTIIGNALRNILEATGERVTAINYLGDWGRQLALVMIG---- 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             Q L  +D     G   G    +    L D + + +      +  P +   + + + + 
Sbjct: 176 --QDLLASDGTTSAGSSAG---SNAPPGLHDLFRAYVAANKAAEADPTILQRA-RDLHRE 229

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV----YEG---ILPPPKSK 297
           +   L A + QH +     +  R   S   D  +++ R  +V    YEG    +P  +S 
Sbjct: 230 LEQALVAGDAQHPLL----NRWRALRSDSIDAYEHIYRALHVRFDAYEGESNYVPGARSL 285

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNM 352
             +   +   + +     V D  D P   L K+DGS TY   DLA    +     G D  
Sbjct: 286 GDRLSALPGAR-VDHGAWVADFADLPTCVLQKADGSSTYLLRDLAAALERAARPEGPDRT 344

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV G     + K+L+A+ AA+   +    +           G+   MS R G  + L  
Sbjct: 345 IYVAGGAQDVHFKQLQALLAAMGRSEVATGLQHVGF------GLIKGMSTRQGTVVFLDD 398

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           ++ E       F M     S++L  +  K++E
Sbjct: 399 LLRE-----TEFHM-----SQVLSLNPQKLRE 420


>gi|333024413|ref|ZP_08452477.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332744265|gb|EGJ74706.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 326

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 20/147 (13%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D    V   +L R+ +  PR   +G  + N A++ +      PL +A L+  R++ DP
Sbjct: 22  EVDS---VAADVLARVTVAVPRPGGYGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78

Query: 77  DVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
            +  V + G GF+N  L+   +Y R +++  +     YG  L G         V+  P G
Sbjct: 79  RLADVRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG-------HHVTLRPLG 129

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  R  V+ + +A L    G EV
Sbjct: 130 ------ARAHVLAEAVARLTRAQGGEV 150


>gi|317146750|ref|XP_001821636.2| arginyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 647

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA
Sbjct: 157 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 213



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 60/296 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +   +  K     
Sbjct: 378 IIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITELMGHKDLASR 437

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--------- 433
              C+ V     GM   MS R G   T++ + D +G    +   + +KN E         
Sbjct: 438 ---CQHVNF---GMVRGMSTRKG---TVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 488

Query: 434 ----LLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIF 472
               +L      V++ S +                 +   Y+QYA+AR  SI R+++   
Sbjct: 489 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSFEGDTGPYLQYAHARLCSIIRKSELNV 548

Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +L   + DL            +T    L   LA++P V+ N T   EP  +  YL+ + 
Sbjct: 549 EELGSANLDLLT----------ETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMT 598

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +        +  V  +  +L   R+ L  +   ++ +G+ ++G+   + M
Sbjct: 599 HTLSSSY-------EVLKVVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSRM 647


>gi|83769499|dbj|BAE59634.1| unnamed protein product [Aspergillus oryzae]
          Length = 651

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA
Sbjct: 157 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 213



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 60/290 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +   +  K     
Sbjct: 378 IIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITELMGHKDLASR 437

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--------- 433
              C+ V     GM   MS R G   T++ + D +G    +   + +KN E         
Sbjct: 438 ---CQHVNF---GMVRGMSTRKG---TVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 488

Query: 434 ----LLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIF 472
               +L      V++ S +                 +   Y+QYA+AR  SI R+++   
Sbjct: 489 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSFEGDTGPYLQYAHARLCSIIRKSELNV 548

Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +L   + DL            +T    L   LA++P V+ N T   EP  +  YL+ + 
Sbjct: 549 EELGSANLDLLT----------ETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMT 598

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                 +        +  V  +  +L   R+ L  +   ++ +G+ ++G+
Sbjct: 599 HTLSSSY-------EVLKVVGSEPELKKARMALYESARQVLYNGMRVVGL 641


>gi|328672623|gb|AEB26870.1| arginyl-tRNA synthetase, degenerate [Anaplasma phagocytophilum HZ]
          Length = 57

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           GY+VT++YY+NDA +Q+ TL   VF RY++AL   +  +  G YPG
Sbjct: 2   GYDVTKKYYVNDAVSQVKTLVSPVFLRYKEAL-EEEITIGAGLYPG 46


>gi|119481669|ref|XP_001260863.1| arginyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119409017|gb|EAW18966.1| arginyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 664

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%)

Query: 89  INLYLSPSYLRK-ILSSIVVSGIEYGRNL---------IGKGTK-VNIEFVSANPTGPMH 137
           +  +  P  L K ++S I+     +G N            KG K + +EF S N   P H
Sbjct: 112 LQFFFKPEPLTKTVISRILKEKATFGTNGNQGLRDPADPSKGKKRIIVEFSSPNIAKPFH 171

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            GH R  ++G  LA+L    G++V +  Y+ D G Q   LA
Sbjct: 172 AGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 212



 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 49/289 (16%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372
           +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +            
Sbjct: 377 IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMGRKDVASR 436

Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419
                      +S +K  +   L +++R   D M   M   A  +  + +     D +G 
Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKGNAEKYAQVENPEETADILGL 495

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-- 476
            SV    +  K     DF+   +   +    P  Y+QYA+AR  SI R++     +LD  
Sbjct: 496 TSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKSGLNVEELDSA 553

Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             DL            +   + L+  LA +P V+ N T   EP  +  YL+ +  +    
Sbjct: 554 NLDLLT----------EPHAVDLVRLLATWPDVLLNTTKTLEPTTILTYLFRMTHILSSS 603

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +        +  V  +  +L   R+ L  A   ++++G+ ++G+ SP E
Sbjct: 604 YD-------VLKVVGSEPELKKARMALYEAARQVLHNGMRVLGL-SPVE 644


>gi|167461683|ref|ZP_02326772.1| arginine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 155

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           A   +INL+ +PS    +L   +++  E+G+  +G+G +V I+  S N   P  +GH R 
Sbjct: 71  AAGPYINLFFTPSVYGDLLLQGMMN-PEFGKPDLGQGKRVIIDMSSPNIAKPFGIGHLRS 129

Query: 144 AVVGDTLASLMAFSGYEVTREYYIND 169
            V+G+ L +L   +G+E     ++ D
Sbjct: 130 TVIGNALYNLYKETGFEPVSVNHLGD 155


>gi|296812237|ref|XP_002846456.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238841712|gb|EEQ31374.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 645

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 20/172 (11%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I ++      V+   + G      +        ++ SI+ +   YG N  
Sbjct: 82  GKKPQEIAADIASKFPKSDLVEPPVVVGAHLQFFFSHKPLTEYVIRSILENKDAYGSNAN 141

Query: 117 IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +G        KG K V +EF S N   P H GH R  ++G  +A+L    G++V +  Y+
Sbjct: 142 VGLQDQKDPSKGKKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTVLGWDVLKINYL 201

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216
            D G Q   LA      Y++  Y ++ DL   P  +   VY+K + K++A++
Sbjct: 202 GDWGKQYGLLANG----YEK--YGSEEDLLKDPINHLFEVYVK-INKDVAEQ 246



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 62/291 (21%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+A    + ++  FD MIYV+ +    ++ +L      V +K     
Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDKYHFDKMIYVVAAQQELHLAQLFKTTELVGKKDLASR 436

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431
              CE V     GM   MS R G    L  ++ +VG      M   +KN           
Sbjct: 437 ---CEHVSF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNPAKYEQIEDPV 487

Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472
             +++L      V++ S           EN          Y+QYA+AR  S+ R+A +I 
Sbjct: 488 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIK 546

Query: 473 P----DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           P    D D  L            ++  + LI  LA++P V+ NA+   EP  +  YL+ +
Sbjct: 547 PEELGDADLSLLT----------ESHAIDLIRLLAQWPDVVFNASKTLEPCTILTYLFRM 596

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                  +        +  V  +   +   R+ L  +   ++++G+ ++G+
Sbjct: 597 THTLSSGYD-------VLKVVGSEPGVKKARMALYESARQVLHNGMRLLGL 640


>gi|238497145|ref|XP_002379808.1| arginyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220694688|gb|EED51032.1| arginyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 709

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA
Sbjct: 219 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 275



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 60/296 (20%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +   +  K     
Sbjct: 440 IIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITELMGHKDLASR 499

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--------- 433
              C+ V     GM   MS R G   T++ + D +G    +   + +KN E         
Sbjct: 500 ---CQHVNF---GMVRGMSTRKG---TVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 550

Query: 434 ----LLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIF 472
               +L      V++ S +                 +   Y+QYA+AR  SI R+++   
Sbjct: 551 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSFEGDTGPYLQYAHARLCSIIRKSELNV 610

Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +L   + DL            +T    L   LA++P V+ N T   EP  +  YL+ + 
Sbjct: 611 EELGSANLDLLT----------ETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMT 660

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +        +  V  +  +L   R+ L  +   ++ +G+ ++G+   + M
Sbjct: 661 HTLSSSY-------EVLKVVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSRM 709


>gi|146322998|ref|XP_755736.2| arginyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129558565|gb|EAL93698.2| arginyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 646

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%)

Query: 89  INLYLSPSYLRK-ILSSIVVSGIEYGRNL---------IGKGTK-VNIEFVSANPTGPMH 137
           +  +  P  L K ++S I+     +G N            KG K + +EF S N   P H
Sbjct: 112 LQFFFKPEPLTKTVISRILKEKAAFGTNGNQGLRDPSDPSKGKKRIIVEFSSPNIAKPFH 171

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            GH R  ++G  LA+L    G++V +  Y+ D G Q   LA
Sbjct: 172 AGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 212



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 49/289 (16%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372
           +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +            
Sbjct: 377 IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMGRKDLASR 436

Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419
                      +S +K  +   L +++R   D M   M   A  +  + +     D +G 
Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKGNAEKYAQVENPEETADILGL 495

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-- 476
            SV    +  K     DF+   +   +    P  Y+QYA+AR  SI R++     +LD  
Sbjct: 496 TSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKSGLNVEELDSA 553

Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             DL            +   + L+  LA +P V+ N T   EP  +  YL+ +  +    
Sbjct: 554 NLDLLT----------EPHAVDLVRLLATWPDVLLNTTKTLEPTTILTYLFRMTHILSSS 603

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +        +  V  +  +L   R+ L  A   ++++G+ ++G+ SP E
Sbjct: 604 YD-------VLKVVGSEPELKKARMALYEAARQVLHNGMRVLGL-SPVE 644


>gi|159129792|gb|EDP54906.1| arginyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 667

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%)

Query: 89  INLYLSPSYLRK-ILSSIVVSGIEYGRNL---------IGKGTK-VNIEFVSANPTGPMH 137
           +  +  P  L K ++S I+     +G N            KG K + +EF S N   P H
Sbjct: 112 LQFFFKPEPLTKTVISRILKEKAAFGTNGNQGLRDPSDPSKGKKRIIVEFSSPNIAKPFH 171

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            GH R  ++G  LA+L    G++V +  Y+ D G Q   LA
Sbjct: 172 AGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 212



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 49/289 (16%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372
           +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +            
Sbjct: 377 IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMGRKDLASR 436

Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419
                      +S +K  +   L +++R   D M   M   A  +  + +     D +G 
Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKGNAEKYAQVENPEETADILGL 495

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-- 476
            SV    +  K     DF+   +   +    P  Y+QYA+AR  SI R++     +LD  
Sbjct: 496 TSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKSGLNVEELDSA 553

Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             DL            +   + L+  LA +P V+ N T   EP  +  YL+ +  +    
Sbjct: 554 NLDLLT----------EPHAVDLVRLLATWPDVLLNTTKTLEPTTILTYLFRMTHILSSS 603

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +        +  V  +  +L   R+ L  A   ++++G+ ++G+ SP E
Sbjct: 604 YD-------VLKVVGSEPELKKARMALYEAARQVLHNGMRVLGL-SPVE 644


>gi|302521926|ref|ZP_07274268.1| arginyl tRNA synthetase [Streptomyces sp. SPB78]
 gi|302430821|gb|EFL02637.1| arginyl tRNA synthetase [Streptomyces sp. SPB78]
          Length = 326

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 20/147 (13%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D    V   +L R+ +  PR   +G  + N A++ +      PL +A L+  R++ DP
Sbjct: 22  EVDS---VAADVLARVTVGVPRPGGYGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78

Query: 77  DVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
            +  + + G GF+N  L+   +Y R +++  +     YG  L G         V+  P G
Sbjct: 79  RLADIRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG-------HHVTLRPLG 129

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  R  V+ + +A L    G EV
Sbjct: 130 ------ARAHVLAEAVARLTRAQGGEV 150


>gi|291437229|ref|ZP_06576619.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291340124|gb|EFE67080.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 351

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 25/146 (17%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503
           Q ++NP+F V+YA+AR R++ R A D+              P+      +++Q L   LA
Sbjct: 226 QREDNPLFRVRYAHARTRALLRNAADL-----------GFAPEPGPVTGADVQPLFQALA 274

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++PRV+  A   + P +LA +L  +A     +       G E P                
Sbjct: 275 DHPRVLAAAAAHRAPDRLARHLVAVADATPPLLPAVLPVGEEKPSAAHRARLALADAA-- 332

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
                   +++  GL+++G+++P+ +
Sbjct: 333 -------GTVLAGGLSLLGIDAPDHL 351



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + +R+V+  PR    G  +TN A+ L+ P G     +AE++   +  D  +  V + G G
Sbjct: 3   VPERVVVAPPRPGGCGDYATNVALRLACPAGEPARRVAEILRPHLLRDGGIAEVVVTGPG 62

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYG 113
           F+N+ L  +    ++  I+  G  YG
Sbjct: 63  FLNISLRSAAPVALVQEILRCGPRYG 88


>gi|239928903|ref|ZP_04685856.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 25/146 (17%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503
           Q ++NP+F V+YA+AR R++ R A D+              P+      +++Q L   LA
Sbjct: 250 QREDNPLFRVRYAHARTRALLRNAADL-----------GFAPEPGPVTGADVQPLFQALA 298

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++PRV+  A   + P +LA +L  +A     +       G E P                
Sbjct: 299 DHPRVLAAAAAHRAPDRLARHLVAVADATPPLLPAVLPVGEEKPSAAHRARLALADAA-- 356

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
                   +++  GL+++G+++P+ +
Sbjct: 357 -------GTVLAGGLSLLGIDAPDHL 375



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + +R+V+  PR    G  +TN A+ L+ P G     +AE++   +  D  +  V + G G
Sbjct: 27  VPERVVVAPPRPGGCGDYATNVALRLACPAGEPARRVAEILRPHLLRDGGIAEVVVTGPG 86

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYG 113
           F+N+ L  +    ++  I+  G  YG
Sbjct: 87  FLNISLRSAAPVALVQEILRCGPRYG 112


>gi|148726490|emb|CAN88096.1| novel protein similar to vertebrate arginyl-tRNA synthetase-like
           (RARSL, zgc:63702) [Danio rerio]
          Length = 221

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 27/155 (17%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKIL 102
           HL  + A+   RP G D       +  +I+ D  V+ V I G+G I+  L+   L +K+L
Sbjct: 48  HLLQSGAV---RPDG-DLQNTTHTLARQIRTDAVVEEV-IPGRGVIHFRLNKLLLAQKLL 102

Query: 103 SSI------------VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +            ++  +  GR L+        EF S N     H GH R  ++G+ +
Sbjct: 103 DQLRSDPDGFGVKSEILRRLRVGRTLV--------EFSSPNIAKKFHAGHLRSTIIGNFI 154

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           A+L    G EV R  Y+ D G Q   L  S F R+
Sbjct: 155 ANLKKALGNEVIRVNYLGDWGMQFGLLG-SGFERF 188


>gi|313219483|emb|CBY30407.1| unnamed protein product [Oikopleura dioica]
          Length = 178

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ- 173
           +LI  G ++ ++F S N   P H+GH R  + G  + +L+   G+EV R  Y+ D  ++ 
Sbjct: 49  SLITTGKRIVVDFSSPNIAKPFHLGHLRSTITGQCVCNLLEAQGHEVIRVNYLGDWESRA 108

Query: 174 INTLALS 180
           IN L ++
Sbjct: 109 INQLTIA 115


>gi|261203070|ref|XP_002628749.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239590846|gb|EEQ73427.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 526

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 22/165 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90
           I+R +  AHG +    A +  +   +D + +   ++L    +  +P    VFI       
Sbjct: 61  IQRTQVLAHGDVMVVVARLRLKGANVDQVALDLSSKLCGISLISNPVPKGVFIP------ 114

Query: 91  LYLSPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           ++ S + L           R++     ++G++   N      KV +EF S N     H G
Sbjct: 115 IFFSATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAG 174

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           H R  ++G  +A+L    G++V +  Y+ D G Q   LA  V W+
Sbjct: 175 HLRSTIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLA--VGWQ 217


>gi|318060726|ref|ZP_07979449.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 326

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D    V   +L R+ +  PR    G  + N A++ +      PL +A L+  R++ DP
Sbjct: 22  EVDS---VAADVLARVTVGVPRPGGDGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78

Query: 77  DVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
            +  V + G GF+N  L+   +Y R +++  +     YG  L G         V+  P G
Sbjct: 79  RLADVRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG-------HHVTLRPLG 129

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  R  V+ + +A L    G EV
Sbjct: 130 ------ARAHVLAEAVARLTRAQGGEV 150


>gi|297202381|ref|ZP_06919778.1| arginyl tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197710100|gb|EDY54134.1| arginyl tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 397

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 23/108 (21%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRN----VIPQESEFDTSELQLI 499
           Q + NP+F V+YA+AR R++ R A D+ F     D+ PR      +P+    +T   + +
Sbjct: 239 QRESNPLFRVRYAHARTRALSRNAADLGFHAEPGDVHPRGDTEAAVPETGVRETDVQETV 298

Query: 500 VH------------------LAEYPRVIENATIAQEPYKLAFYLYDLA 529
           V                   LA++PRV++ A +   P +LA +L  +A
Sbjct: 299 VAETAVAETVVPDTTTLRNVLADHPRVLQAAAVHHAPDRLARHLVTVA 346



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 21/126 (16%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           P  C  G  +TN A+ L+RP G  PL +AE++  R+     +  V + G GF+N+ L  S
Sbjct: 38  PGGC--GDYATNVALQLARPAGQPPLRVAEILRQRLVQSDGIGDVVVTGPGFLNISLRGS 95

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG---PMHVGH-CRCAVVGDTLAS 152
               ++  I+  G+ YG               +  PTG    +H  H  R  VV D +A 
Sbjct: 96  G-DALVREILRLGLRYGH--------------AERPTGQLVQLHAPHEVRAVVVMDAVAR 140

Query: 153 LMAFSG 158
           ++   G
Sbjct: 141 ILRSQG 146


>gi|223935965|ref|ZP_03627879.1| Arginine--tRNA ligase [bacterium Ellin514]
 gi|223895187|gb|EEF61634.1| Arginine--tRNA ligase [bacterium Ellin514]
          Length = 302

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 120/333 (36%), Gaps = 89/333 (26%)

Query: 306 RKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMI-YVMGSDHSG 362
           +KQ  F     G+    P L  KSDG+  Y   DLA    + E      I YV G     
Sbjct: 6   QKQDPFLKQEDGEWKPNPALIQKSDGAANYATTDLATLAYRLETWNPAEIAYVTGGPQQL 65

Query: 363 YVKRLEAV------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           + +++ A+       A V         +L E      DG P K   R+G+ + L  ++DE
Sbjct: 66  HFQQIFAIFRRWHPEAPVKLAHVWFGSILGE------DGKPFKT--RSGETVKLADLLDE 117

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE---------------------------- 448
               + + +     + +  + +    +EQ +E                            
Sbjct: 118 AEERAYKVV-----SDKATERETTVPEEQKREIARVVGLGALKYADLLPNRQSDYVFSWD 172

Query: 449 -------NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV- 500
                  N   Y+QYAYAR RSIFR               R  I  E+   +  + L   
Sbjct: 173 RMLALNGNTAPYLQYAYARIRSIFR---------------RGGIENEASGWSGTISLTAP 217

Query: 501 -------HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN-PRLRFVQANN 552
                  HL  +  V+E       P  L  YLY+L+    GH++   EN P L+   A  
Sbjct: 218 DEIILSKHLLNFSLVLEGVAEEYRPNYLCNYLYELS----GHFARFYENCPVLKSEPAER 273

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 RL L    A ++  GL I+G+E   +M
Sbjct: 274 ----ASRLLLCDLTARVLKQGLEILGIEVLEQM 302


>gi|4582967|gb|AAD24873.1|AF073777_1 arginyl-tRNA-synthetase [Neisseria meningitidis]
          Length = 170

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 20/170 (11%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +       FD+  +    + N   Y+QYAY R +S+FR+A  
Sbjct: 16  RKIGKTVGIGAVKYADLSKNRHPDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 73

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                ++D     V+ +       E QL   L ++  V+++      P+ LA YLY +A+
Sbjct: 74  -----EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVRGHAYPHYLAAYLYQIAT 123

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +F    S     P L+   A+       RLQL       +  GL+++G++
Sbjct: 124 LF----SLYEACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 165


>gi|322692397|gb|EFY84312.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 611

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           GK T V IEF S N     H GH R  ++G  L++L   SGY V R  Y+ D G Q   L
Sbjct: 142 GKKT-VIIEFSSPNIAKKFHAGHLRSTIIGGFLSNLYEKSGYIVVRTNYLGDWGRQYGLL 200

Query: 178 A 178
           A
Sbjct: 201 A 201



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 22/149 (14%)

Query: 436 DFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDL---DFDLFPRNVIPQESEF 491
           DFD  ++   +    P  Y+QYA+AR  SIFR+      ++   DF L  ++        
Sbjct: 475 DFDLDRMTSFEGDTGP--YLQYAHARLCSIFRKVDFTVDEMLKSDFSLLSQS-------- 524

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ-A 550
               + L+  +A++P ++ +A    EP  +  YL+ L       + H      LR V+  
Sbjct: 525 -PHAIGLLRVMAQFPDLVNHALKTLEPTTILTYLFKLTHKLSSSYDH------LRVVEPT 577

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGV 579
               +++ R  L +    ++ +G+ ++G+
Sbjct: 578 EGPAMSLARASLYYGARQVLRNGMVLLGI 606


>gi|315497731|ref|YP_004086535.1| arginine--tRNA ligase [Asticcacaulis excentricus CB 48]
 gi|315415743|gb|ADU12384.1| Arginine--tRNA ligase [Asticcacaulis excentricus CB 48]
          Length = 679

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +INL LS  ++     ++   G  +G +    G    +++ S N    +H GH R  +VG
Sbjct: 120 YINLTLSDGWMLNGAQAVTEIGARFGDSDALMGRSAVVDYSSPNVAKTLHAGHIRSTIVG 179

Query: 148 DTLASLMAFSGYEVTREYYINDAGA 172
             L++L   SG +  R  +IND G 
Sbjct: 180 HVLSNLWERSGADTFRVNHINDFGG 204



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 29/139 (20%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YV YA  R RSI R+          D    N+     E D  E  L++ + + P+ +  A
Sbjct: 564 YVVYAACRARSILRKN---------DGGTANIDGVSYEIDAQEADLLLKVQQIPQKVVAA 614

Query: 513 TIAQEPYKLAFYLYDLASVFHGHW------SHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             A  P  L  +L D+A++++ ++      S G  NP               RL +  AV
Sbjct: 615 AKAANPSVLVRHLMDVAAIYNSYYTRVPVISDGVANP--------------ARLMITQAV 660

Query: 567 ASIINSGLNIIGVESPNEM 585
              +   L+I  +E P  +
Sbjct: 661 QVALTRALSICHIECPEAI 679


>gi|182435977|ref|YP_001823696.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178464493|dbj|BAG19013.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 360

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+RP GL  L I
Sbjct: 4   ADLSRTVLHAVRRAVDEDALRAPVPARVRVERSRPGGSGDYACAVALQLARPAGLPALEI 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--RKILSSI 105
           A ++  R+  +P V  V I G GF++  L    +  R +L ++
Sbjct: 64  ARILRERVAAEPGVGRVEITGPGFLSFTLDAPAVGDRAVLGAV 106



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 14/189 (7%)

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           P+     AG+ +      + +G D+ R+ +L     +       ++  Q + NP+F V+Y
Sbjct: 186 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 238

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR R++ R A  +      D  P    P  + +D +   L   +A++P V+  A   +
Sbjct: 239 AHARARALTRGATAL--GFTADAAPYGESP--APYDEAARPLTDLIADHPGVLLAAARHR 294

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P ++A     L +V H  +      P L             RL L  A  +++  GL++
Sbjct: 295 APDRVA---RQLEAVAHAFFDFHDSCPSLPAGDEKPSAAHRARLALAEAAGTVLAGGLSL 351

Query: 577 IGVESPNEM 585
           +G+ +P  +
Sbjct: 352 LGIRAPEHL 360


>gi|194690392|gb|ACF79280.1| unknown [Zea mays]
          Length = 240

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 37/233 (15%)

Query: 355 VMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           V+GSD   +       V+ +E +  A S  K+++      L RL  +G  +  +      
Sbjct: 31  VLGSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL------LQRLTENGKIVDWTDEE--- 81

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFR 466
             L    + VG  +V++  L  KN+ L ++ F   +  S K N   Y+QYA+AR  SI R
Sbjct: 82  --LEQTSEAVGYGAVKYADL--KNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIR 137

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++     DL          P E         L ++L  +  V+E A     P  +  YLY
Sbjct: 138 KSNKDVEDLKMTGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVVCEYLY 190

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L+ +F   +++          Q         RL L  A A ++    N++G+
Sbjct: 191 NLSEMFTKFYTN---------CQVVGSPEETSRLLLCQATAVVMRQCFNLLGI 234


>gi|332267363|ref|XP_003282651.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Nomascus
           leucogenys]
          Length = 257

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 47/261 (18%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---YQQALY-- 190
           MHVGH R  ++G++++ L  F+GY+V R   ++    +  +  L +F     Y   LY  
Sbjct: 1   MHVGHLRSTIIGESISRLFEFAGYDVLR---LSGTKDKTPSFILHIFLEDPLYATGLYPG 57

Query: 191 ----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV----KDYSVQAMM 242
               + ++D      P   L+   KE   ++ +E   F +  +  +V    K+  +    
Sbjct: 58  RERSSKETDYLTVSPPIGDLQLFYKESKKRFDTE-EEFKKRAYQCVVLLQGKNPDITKAW 116

Query: 243 KII----RDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPK 295
           K+I    R +   +    DI + E    RG+      + DI+     +G+V         
Sbjct: 117 KLICDVSRQEFNKIYDALDISLIE----RGESFYQDRMYDIVKEFEDRGFV--------- 163

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                + D D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IY
Sbjct: 164 -----QLD-DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIY 214

Query: 355 VMGSDHSGYVKRLEAVAAAVS 375
           V+ +  S + + + A A  + 
Sbjct: 215 VVDNGQSVHFQAIFAAAQMIG 235


>gi|307211858|gb|EFN87805.1| Probable arginyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 391

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 121/304 (39%), Gaps = 63/304 (20%)

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +G+  + P++KSDGS  Y   D+A    ++ER  FD M YV+ +  +G+   L  +    
Sbjct: 117 LGNGKNIPVIKSDGSTLYITRDIAAAIDRFERNNFDCMYYVVDNTQAGHFSNLLEIL--- 173

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------EVGSDSVRF- 424
                Q+ +   E ++  R G    M  R G+ + L  +++         ++ S + +  
Sbjct: 174 ----KQMEIPWVERLKHIRFGRIHGMRTRKGNVMFLEDILNTARDTMKQRQLDSPTTKVP 229

Query: 425 MMLWRKNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQ 467
           M L   +S++L      + +  K+                 N    +QY + R  ++ R 
Sbjct: 230 MNLTDNSSDILGISAMMINDLKKDRQRDYTFDWDAAFDLKGNTGVKLQYTHCRLVNLERN 289

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKL 521
              I                 SE + S LQ      LI+ +A++  VI  +    EP  L
Sbjct: 290 CGAILT---------------SECEPSLLQEEVVDDLILLIAKFDEVILKSYKEMEPCVL 334

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL+ L++  +  +   R       V+     +   RL L H   +++  G+ ++G+  
Sbjct: 335 TAYLFKLSNTVNRAFKTLR-------VKDEPTDVASQRLLLFHVAKNVLAQGMRLLGLTP 387

Query: 582 PNEM 585
             +M
Sbjct: 388 LEKM 391


>gi|68070611|ref|XP_677217.1| arginyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56497245|emb|CAI04834.1| arginyl-tRNA synthetase, putative [Plasmodium berghei]
          Length = 472

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 45/192 (23%)

Query: 43  GHLSTNAAMILSRPLGLD---------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           GH   N A+ + +  G +          L+I E I   +      D +  + +GFI + +
Sbjct: 40  GHFQCNNAINIYKKYGKELNFENAHKVSLSIIENINENL-----FDDINASPQGFITVKI 94

Query: 94  SPSYLRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           S  Y+ K L           ++ +  I  G N   K   V I+F S N    MHVGH R 
Sbjct: 95  SKDYIEKSLLKLYKNNKININVDMDEIHDGNN--AKYENVLIDFSSPNIAKEMHVGHLRS 152

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-------------------ALSVFWR 184
            ++GD++  +  F   +     ++ D G Q   +                   +L++ ++
Sbjct: 153 TILGDSICKIFEFLKVKTHTINHVGDWGTQFGMIINYVITNYPNYKEEMPELKSLTLLYQ 212

Query: 185 YQQALYNNDSDL 196
             +  Y+ND D 
Sbjct: 213 EAKKCYDNDKDF 224


>gi|326562856|gb|EGE13144.1| arginyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 127

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A      LD       ++  E +    E  L V L ++  V
Sbjct: 7   NTAPYMQYAYTRIRSIFVRA-----GLDMADIGGEIVIHEDK----ERALAVKLLQFEEV 57

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ L  YL++LA +F   +      P L    +++ K    RL+L    A 
Sbjct: 58  LLLVAKDGMPHLLCQYLFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAK 110

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 111 TLKQGLQLLGIKTVEKM 127


>gi|302554156|ref|ZP_07306498.1| arginyl tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302471774|gb|EFL34867.1| arginyl tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 357

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 25/146 (17%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503
           Q + NP+F V+YA+AR R++ R A D+              P+      S+   L+  L 
Sbjct: 232 QRETNPLFRVRYAHARTRALLRNAADL-----------GFAPEPGPVHASDTAPLLAALG 280

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           ++PR++  +     P +LA +L  +A     V       G E P                
Sbjct: 281 DHPRLLAASATHHTPDRLARHLVTVADATLPVLPAVLPLGEEKPSAAHRARLALAEAA-- 338

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
                   +++  GL+++G+++P  +
Sbjct: 339 -------GTVLAGGLSLLGIDAPEHL 357



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + +R V+  P     G  +TN A+ L+   G  P  +AE++ AR+  +     V + G G
Sbjct: 27  VPERAVVTPPGPGGCGDYATNIALQLAGAAGQQPRRVAEILRARLLDECRFTDVVVTGPG 86

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIE 126
           F+N+ L  +    +++ I+  G  YG    G  GT V + 
Sbjct: 87  FLNVSLRSTASAGLVAEILRRGRRYGHVTTGFSGTAVRLR 126


>gi|322702457|gb|EFY94103.1| arginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 627

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ IEF S N     H GH R  ++G  +A+L    G++VT+  Y+ D G Q   LA  V
Sbjct: 160 KIIIEFSSPNIAKEFHAGHLRSTIIGAYIANLYESMGWDVTKVNYLGDWGKQFGLLA--V 217

Query: 182 FW 183
            W
Sbjct: 218 GW 219



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 40/280 (14%)

Query: 329 GSYTYFAADLAYF---KCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAA-VSEKKAQ 380
           GS TY   D+A     + KY   FD MIYV+  +   Y KR    LE +  + ++ +   
Sbjct: 341 GSTTYLLRDVAAILEREVKYN--FDKMIYVVSCEQDLYFKRVFRTLELMGRSDLAGRLQH 398

Query: 381 INV--------------LLCELVRLYRDGMPIKMSKRAGDFITLR---HVVDEVGSDSVR 423
           IN               LL +++   RD M   M +    +  +     V + VG  +V 
Sbjct: 399 INFGKVLGMSSRLGNVQLLGDILDQSRDAMHDVMRRNTTKYAQVEDPESVAESVGISAVM 458

Query: 424 FMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
              +  K      FD  ++   +    P  Y+QY++AR  SI R+A     ++       
Sbjct: 459 VQDMSGKRINNYPFDITRMTSFEGDTGP--YLQYSHARVNSILRKAGLTRQEVAEHCLRH 516

Query: 483 NVIPQESEFDTSE-LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
               +E   DT   + L+  +A+YP V   A    EP  +  YL+ L       +     
Sbjct: 517 PTSLEEQFSDTPHCVNLLRLIAQYPDVAAAALRNLEPSTILTYLFRLTHQLSSCYD---- 572

Query: 542 NPRLRFVQANN--RKLTMMRLQLVHAVASIINSGLNIIGV 579
              +  V   N  R + + R  L      ++ +G+ ++G+
Sbjct: 573 ---VVQVTGTNEGRDVMLSRAGLYEGARQVLENGMRLLGL 609


>gi|294669638|ref|ZP_06734705.1| hypothetical protein NEIELOOT_01539 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308551|gb|EFE49794.1| hypothetical protein NEIELOOT_01539 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 131

 Score = 46.2 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R +S+FR+A       ++D     V+ +       E QL   L ++  V
Sbjct: 13  NTAPYLQYAYTRVQSVFRKAG------EWDATAPTVLTE-----PLEKQLAAELLKFEDV 61

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++      P+ LA YLY +A++F   +      P L+  +   R     RLQL      
Sbjct: 62  LQSVADTAYPHYLAAYLYQIATLFSRFY---EACPILK-SEGTTRN---SRLQLAKLTGD 114

Query: 569 IINSGLNIIGVE 580
            +  GL+++G++
Sbjct: 115 TLKQGLDLLGID 126


>gi|254382307|ref|ZP_04997667.1| arginyl tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341212|gb|EDX22178.1| arginyl tRNA synthetase [Streptomyces sp. Mg1]
          Length = 317

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 20/142 (14%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
           + ++     + +R+V++R R    G  +T  A  +++  G  P  +A +I   +   P +
Sbjct: 23  EGELPAGTGVPERVVVDRTRPGGVGEYATAVAFQIAKRAGTAPAEVARVIAGMLAGVPGI 82

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
           + V I G GF+N  L+     +++  +   G  YG             F S +       
Sbjct: 83  ERVEITGAGFLNFVLAERSAAELVREVRERGARYG-------------FASPD------- 122

Query: 139 GHCRCAVVGDTLASLMAFSGYE 160
           G  R  VVGD +  ++   G E
Sbjct: 123 GELRARVVGDAVRRILWSQGQE 144


>gi|156555207|ref|XP_001604101.1| PREDICTED: similar to GA10066-PA [Nasonia vitripennis]
          Length = 564

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 55/292 (18%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           ++KSDGS  Y   D+A    +YE+  FD M YV+ +  + +   L  V +A       + 
Sbjct: 298 IIKSDGSSLYITRDIAAAISRYEKNRFDTMYYVVDNAQTDHFINLIGVLSA-------MK 350

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------------------- 417
           +   + ++  + G    MS R G  + L+  +DEV                         
Sbjct: 351 LPWADRLKHVKFGKIKGMSTRKGTAVFLQDFLDEVKAVMKEKQMQSPTTKVNLDYDDPST 410

Query: 418 ---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
              G  +V    L  K  +  +FD+ K  E   +  +  +QYA+ R  S+   +      
Sbjct: 411 EILGVSAVIINDLKHKRHQDYEFDWNKALEMKGDTGI-TLQYAHCRLVSLEENSGATIAS 469

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                     IP      T+E  L+  + ++   +  +    EPY L  YL+ L      
Sbjct: 470 --------ECIPSLLTEPTAE-DLLYIIGKFDEAVIKSYQELEPYTLVHYLFQL------ 514

Query: 535 HWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             SH      ++  ++    +L   RL L+++   I+  G+ ++G++  N+M
Sbjct: 515 --SHATSKALKVLRIKGEPTELANQRLLLMNSARKILAQGMKLLGLKPLNKM 564



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++F S N   P HVGH R  ++G+ +A++  +    V R  Y+ D G Q   + L +
Sbjct: 116 VDFSSPNIAKPFHVGHLRSTMIGNYIANINNYFKNNVKRINYLGDWGTQFGFVQLGL 172


>gi|290957374|ref|YP_003488556.1| arginyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646900|emb|CBG69997.1| putative arginyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 398

 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R V+  P     G  +TN A+ L+RP G  PL +AE++   +     V +V I G GF+N
Sbjct: 30  RAVVTPPGPGGSGDYATNIALQLARPAGRPPLQVAEILRPHLSSTEGVAAVEITGPGFLN 89

Query: 91  LYL----SPSYLRKIL 102
           ++L    + + +R+IL
Sbjct: 90  IHLDRAATTTLVRRIL 105



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 417 VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +G D++R+ +L        R  ++LL         Q   NP+F V+YA+AR R++ R A 
Sbjct: 230 LGPDALRWALLHPAAHDRPRITADLL--------AQRAGNPLFRVRYAHARVRALTRNAA 281

Query: 470 DI-FPDLDFDL----FPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            + F      L     P    P  ++      + L+  L  YP  +  A   + P +LA 
Sbjct: 282 ALGFTAAPGPLGALCGPAEPYPSATQLTADPSIPLVTALTTYPSTLTRAATLRAPDRLAR 341

Query: 524 YLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++  LA       H     G E P               RL L  A  +++  GL+++G+
Sbjct: 342 HMVVLADALLAFQHTVLPRGDEKP---------SAAHRARLALAEATGTVLAGGLSLLGI 392

Query: 580 ESP 582
           ++P
Sbjct: 393 DAP 395


>gi|255029353|ref|ZP_05301304.1| arginyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 76

 Score = 45.8 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T  RL L+
Sbjct: 1   EFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVTKARLALI 54

Query: 564 HAVASIINSGLNIIGVESPNEM 585
                 + +GL ++GV +P +M
Sbjct: 55  KTAQITLRNGLTLLGVSAPEKM 76


>gi|29829462|ref|NP_824096.1| arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|29606570|dbj|BAC70631.1| putative arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 352

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 29/191 (15%)

Query: 403 RAGDFITLRHVVDE-----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           RAG+ +TLR V        +G+D+ R+ +L     +        +  Q + NP+F ++YA
Sbjct: 179 RAGEAVTLRPVPAPEDPAPLGADAARWALLHPAAHDRPRITADHLA-QRESNPLFRIRYA 237

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQ 516
           +AR R++ R A      L F   P +V       D    +++V  LA YP  +  A    
Sbjct: 238 HARARALTRCAA----RLGFHGEPGDV-----PVDVPGAEVLVRELAGYPHALSAAAAQH 288

Query: 517 EPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
            P +LA +L   A  F    H     G E P                        +++  
Sbjct: 289 APDRLARHLVATADAFLAFQHTVLPLGDEKPSAAHRARLALAEAA---------GTVLAG 339

Query: 573 GLNIIGVESPN 583
           GL+++G+ +P+
Sbjct: 340 GLSLLGISAPD 350



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 12 KNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
          +  L+ + C +   ++   +  R V+  P     G  +TN A+ L+RP G  P  +AE++
Sbjct: 8  RTVLRAVRCAVDEGELSVAVPVRAVVTPPGPGGCGDYATNIALQLARPAGRPPRQVAEIL 67

Query: 69 VARIKIDPDVDSVFIAGKGFINLYL 93
             +     V  V I G GF+N++L
Sbjct: 68 RPHLSRTAGVAGVEITGPGFLNIHL 92


>gi|225563350|gb|EEH11629.1| arginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 636

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90
           I+R +  AHG +    A +  + + +D + +    +L    +   P    VFI    F N
Sbjct: 61  IQRTQVLAHGDVVLVVARLRLKGVNIDQVAVDLSNKLCTISLISSPVPKGVFIPI--FFN 118

Query: 91  LYLSP----SYL---RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
               P    SY+   R++     ++G++  +N      KV +EF S N     H GH R 
Sbjct: 119 ETSLPRLILSYIFDRRQLYGHGNLAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHQRS 178

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
            ++G  +++L    G++V +  Y+ D G Q   LA  V W+
Sbjct: 179 TIIGAYISNLYKSMGWDVLKINYLGDWGKQFGLLA--VGWQ 217


>gi|290559071|gb|EFD92444.1| arginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 484

 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 50/322 (15%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-- 115
           G  P   AE +  RI  +  + SV  A  G+IN+ +  S L         +G   G N  
Sbjct: 38  GKKPKEFAEDLSKRISSEY-IKSVE-AMNGYINISMDFSSLN------THTGFLNGENDN 89

Query: 116 ---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
               I  G  + +E  S NP   +H+GH R + +G+ +     +S   V    +I D GA
Sbjct: 90  STENIFSGKNIRLEHTSVNPNKGLHIGHMRNSYIGEFMRRCFLYSSSNVITSNFIEDTGA 149

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK------ELADKYSSELLNF-- 224
           Q+  + +   +  ++     D+D+    Y     K V +       L +K    LL+   
Sbjct: 150 QVADIIVGFKYLGKKI----DTDIKFDLYCSKIYKEVNQLYESDSTLLEKRRKVLLDIEN 205

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             E+ L I++    + + K++   L  L+   I++D+     D  R            + 
Sbjct: 206 KNEETLEILE----KIVDKVLSAQLVTLSGERIKYDLL----DLER-----------YIL 246

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G V + +    + K     + D+ +    + + G +V   L +SDG+  Y A DLAY 
Sbjct: 247 GEGIVKKALDKLLEEKIAFISESDKNKGCIVTLIDGKEV--TLTRSDGTALYIAKDLAYA 304

Query: 342 KCKYERGFDNMIYV-MGSDHSG 362
             K+    +N+ Y   G ++ G
Sbjct: 305 MIKHGILHENIKYKPFGQNYDG 326


>gi|325093305|gb|EGC46615.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 642

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
           ++G++  +N      KV +EF S N     H GH R  ++G  +++L    G++V +  Y
Sbjct: 88  LAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYKSMGWDVLKINY 147

Query: 167 INDAGAQINTLALSVFWR 184
           + D G Q   LA  V W+
Sbjct: 148 LGDWGKQFGLLA--VGWQ 163


>gi|76155576|gb|AAX26868.2| SJCHGC06108 protein [Schistosoma japonicum]
          Length = 242

 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 18/145 (12%)

Query: 447 KENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLA 503
           K N   Y+ YAY R RSI R A   D   +   D  P N       FD   E  L   L 
Sbjct: 110 KGNTAVYLLYAYTRIRSIIRNAGYSDKSINEIIDTLPLN-------FDHPMEFTLAKALC 162

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRL 560
             P ++         + L  YLYDL+ VF   +        N     VQ N       R+
Sbjct: 163 RLPDILLKIQNDFLLHSLCDYLYDLSCVFTNFYDTCYCIERNQETGDVQINKE-----RI 217

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A A ++  G +I+G+E+  +M
Sbjct: 218 LLCEATARVMKCGFDILGIETVEKM 242


>gi|295666582|ref|XP_002793841.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226277494|gb|EEH33060.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 618

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +G+   +N      KV +EF S N     H GH R  ++G  +++L    G++V +  Y+
Sbjct: 143 TGLRDAKNEAAGRKKVIVEFSSPNIAQEFHAGHLRSTIIGAHISNLYGSMGWDVLKINYL 202

Query: 168 NDAGAQINTLALSVFWR 184
            D G Q   LA  V W+
Sbjct: 203 GDWGKQFGLLA--VGWQ 217


>gi|326567640|gb|EGE17748.1| arginyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 127

 Score = 45.4 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A      LD       ++  E +    E  L V L ++  V
Sbjct: 7   NTAPYMQYAYTRIRSIFARA-----GLDMADIGGEIVIHEDK----ERALAVKLLQFEEV 57

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ L  YL++LA +F   +      P L    +++ K    RL+L    A 
Sbjct: 58  LLLVAKDGMPHLLCQYLFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAK 110

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 111 TLKQGLQLLGIKTVEKM 127


>gi|196005211|ref|XP_002112472.1| hypothetical protein TRIADDRAFT_56525 [Trichoplax adhaerens]
 gi|190584513|gb|EDV24582.1| hypothetical protein TRIADDRAFT_56525 [Trichoplax adhaerens]
          Length = 519

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +++ S N   P HVGH R   +G+ +A++  + G +VTR  Y+ D G Q   L +  F +
Sbjct: 126 VDYSSPNIAKPFHVGHLRSTFIGNFIANINEYFGNKVTRINYLGDWGVQFGLLGVG-FQK 184

Query: 185 Y--QQALYNN 192
           +   ++L NN
Sbjct: 185 FGSTESLINN 194


>gi|213610152|ref|ZP_03369978.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 76

 Score = 45.1 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCA 144
           GFIN++L P++L + +   + S     R  + + T+  + +++ + N    MHVGH R  
Sbjct: 2   GFINIFLEPAFLAEQVQQALTSD----RLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRST 57

Query: 145 VVGDTLASLMAFSGYEVTR 163
           ++GD     + F G+ V R
Sbjct: 58  IIGDAAVRTLEFLGHHVIR 76


>gi|326429873|gb|EGD75443.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 751

 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
           V  G    R+  G    V +E+ S N   P H GH R  ++G+ LA++ A +G  V R  
Sbjct: 206 VTQGSNLDRDQGGGAPVVVVEYSSPNIAKPFHAGHLRSTIIGNVLANMYAAAGARVVRAN 265

Query: 166 YINDAGAQINTLALSVFWRY 185
           Y+ D G QI  +AL  F RY
Sbjct: 266 YLGDWGRQIGLVALG-FERY 284



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 114/296 (38%), Gaps = 58/296 (19%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----------EAVAA 372
           L KSDG+ TY + DL     +++   FD  +YV+  + + + K+L          + VA+
Sbjct: 480 LEKSDGTTTYMSRDLGAILDRHDALRFDKHLYVVAYEQALHFKQLLVLLSSVPGGQGVAS 539

Query: 373 -----------AVSEKKAQINVLLCE----------LVRLYRDGMPIKMSKRAGDFITLR 411
                       +S +K   NV+L E          L RL +D   +  S   GD  T  
Sbjct: 540 RCEHISYGLVTGLSTRKG--NVILLEEILDAAKEQMLQRLQQDSSRVAGS---GDDPTAE 594

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V D +   S+    L  K  +   F + ++ +   +   F +QY + R  SI R    +
Sbjct: 595 AVADMLALSSLVVQDLRSKRVKNYQFSWQRMLDAHGDTGTF-LQYTHVRLASIQR-VNPV 652

Query: 472 FPDLDFDLFPRNVIPQESEFDTS-ELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYDLA 529
            P  D             +  TS   Q ++H LA+   ++  A  A EP  L  YL  L+
Sbjct: 653 SPCTD----------AVDDISTSPHSQAVLHLLAQKQDILAAAVRANEPAVLVQYLLQLS 702

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   H R       V+     +   R+ L  A    +  GL ++G+   + M
Sbjct: 703 RAVSSALPHVR-------VKGAPEMVARERMALFTAARHTLAQGLELLGLAPLDRM 751


>gi|312069872|ref|XP_003137884.1| hypothetical protein LOAG_02298 [Loa loa]
 gi|307766950|gb|EFO26184.1| hypothetical protein LOAG_02298 [Loa loa]
          Length = 500

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 107/520 (20%), Positives = 202/520 (38%), Gaps = 95/520 (18%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           + L+     + I++ S N     HVG+ R  V+G  + ++   +G +V    YI D G Q
Sbjct: 28  QKLVKNKKSIVIDYSSPNIAKQFHVGNFRSTVIGRYIDTINRAAGNKVMSINYIGDWGLQ 87

Query: 174 INTLAL-----------SVFWRYQQALY---------NNDSDLPEGYYPGVY--LKHVGK 211
              +A               W   Q L          N  ++    +    +  L  +  
Sbjct: 88  FALIAAYWPMMKPSQEEWSAWNTMQRLTLLAKCYVEANKSAERSNSFLQRAHDILASMEN 147

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L    +SE L+F +       +  S + + +  R     +N+  D+   E DF      
Sbjct: 148 SLLTAGTSEHLSFWQS-----ARQLSHEQLHRFYR----RINLSMDVEYFESDF----VV 194

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKC-DMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
               +ID + R+G    G         + +C ++D+  ++ R       + R L  +   
Sbjct: 195 SAHQLIDRMLREGQAENG----GNGAISVRCKELDKPIIIRRPNNTTLYLSRDLASALLR 250

Query: 331 YTYFAADLAYFKCKY--ERGFDNMIYV---MGSDHSG------YVKRLEAVAAAVSEKKA 379
              +AAD   +   +   + F+N+ Y+   MG +  G         R++ ++  + E   
Sbjct: 251 EQLYAADEYLYVVDHAQRQHFNNLKYLLNAMGRNDIGDKIQHVSFGRVKGLSTRLGE--- 307

Query: 380 QINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV----DEVGSDSVRFMM-------L 427
                  ELV ++   G+ +     A  FIT    +    DE+   +    +       L
Sbjct: 308 ------VELVSKILDHGLEL-----AKSFITKSKTMKIGQDEISQVAANLSLGTMIIDDL 356

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R  S    F F K  + ++ N +  +Q  ++R  SI  +   +  DL  + F       
Sbjct: 357 KRARSTDYSFSFDKAFQMNQNNALL-LQTKHSRLMSIEERNHTLKQDL-MERF------- 407

Query: 488 ESEFDTSE--LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           E +F+T+E   +L+     +P V+  +    EP +L  YL  LA++       G  +  L
Sbjct: 408 EGDFETNEASWRLLKQFKAFPDVLYASYQEMEPCRLTVYLLQLANIV------GFASCIL 461

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R + +   ++ + RL L+     I+NSG+ ++G+E   +M
Sbjct: 462 R-ISSEPIEVAIPRLLLLSTARKILNSGMRLLGMEPLKKM 500


>gi|124805963|ref|XP_001350588.1| arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23496712|gb|AAN36268.1|AE014846_67 arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 590

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 29/151 (19%)

Query: 43  GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           GH   N A+ + +  G +        I+E I++ I  +   + +  + +GFI + LS  Y
Sbjct: 40  GHYQCNNAINIYKKYGKELNYENAQKISEFIISNIN-ETIFEEIKSSPQGFITVKLSKDY 98

Query: 98  LRKILSSIV---------------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           +   L  +                 S   YG  L+        +F S N    MHVGH R
Sbjct: 99  IETSLKKLFNGEKIDISININDIKESNENYGNVLV--------DFSSPNIAKEMHVGHLR 150

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
             ++GD++  +  F      R  ++ D G Q
Sbjct: 151 STIIGDSICRVFEFLKINTHRVNHVGDWGTQ 181



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           K N   Y+ Y Y+R  SIFR++     D+  D      I         E+ L +H+ ++P
Sbjct: 469 KGNTGIYIIYGYSRICSIFRKSTINVEDISKDELSLTSIY--------EINLGLHILKFP 520

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFV 548
            +          +KLA Y+YDL + F   + + +    EN + R +
Sbjct: 521 DIFYYILKNMLVHKLAEYMYDLTTTFTAFYENCKVLNNENEKSRLL 566


>gi|327305635|ref|XP_003237509.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326460507|gb|EGD85960.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 576

 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 72/289 (24%)

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVA-AAVSEKKAQIN 382
           G+ TY   D+A    + E+  FD MIYV+ ++   Y +RL    E ++   V+ K   +N
Sbjct: 299 GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMSYTDVAAKLEHVN 358

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------S 432
                       G  + MS R      L  ++DE GS     M   RKN          +
Sbjct: 359 F-----------GKVMGMSSRLSTVKILSDILDECGSAMHDVM---RKNPTKYEQIENPT 404

Query: 433 ELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470
           E+ D                     FD  K+   +    P  Y+QYA+AR  SI R+   
Sbjct: 405 EVSDTLGITAVMVQDMTGKRIHNYTFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKV-- 460

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDLA 529
                  D+ P+ +    + F   + Q  +++     +V  NA    EP  +  YL+ LA
Sbjct: 461 -------DIDPKEI--TNANFSLLKEQHAINILRLMAQVTSNAVKTLEPTTILTYLFRLA 511

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
                 +        ++ + A +  +T+ RL L      ++ +G+ ++G
Sbjct: 512 HQISSGYD------VIKVIGAESHDVTVARLALYEGARQVLKNGMRLLG 554


>gi|226287045|gb|EEH42558.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 584

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           IE  +N      KV +EF S N     H GH R  ++G  +++L    G++V +  Y+ D
Sbjct: 95  IEDAKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYGNMGWDVLKINYLGD 154

Query: 170 AGAQINTLALSVFWR 184
            G Q   LA  V W+
Sbjct: 155 WGKQFGLLA--VGWQ 167


>gi|297520008|ref|ZP_06938394.1| arginyl-tRNA synthetase [Escherichia coli OP50]
          Length = 95

 Score = 44.7 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E QL   L ++   +        P+ +  YLYDLA +F G + H         + A N +
Sbjct: 11  EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH------CPILSAENEE 64

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 65  VRNSRLKLAQLTAKTLKLGLDTLGIETVERM 95


>gi|154281943|ref|XP_001541784.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150411963|gb|EDN07351.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 596

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
           ++G++  +N      KV +EF S N     H GH R  ++G  +++L    G++V +  Y
Sbjct: 102 LAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYKSMGWDVLKINY 161

Query: 167 INDAGAQINTLALSVFWR 184
           + D G Q   LA  V W+
Sbjct: 162 LGDWGKQFGLLA--VGWQ 177


>gi|46107744|ref|XP_380931.1| hypothetical protein FG00755.1 [Gibberella zeae PH-1]
          Length = 1337

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%)

Query: 89  INLYLSPSYLRKI-LSSIVVSGIEYGRNLI----------GKGTKVNIEFVSANPTGPMH 137
           + ++ SP+ L ++ L  I    + YG +            G+  KV +E+ S N      
Sbjct: 817 LQVFFSPNTLSRLSLFYISDRNVSYGYDTSLGLTDPAVPDGQKKKVIVEYSSPNMASEFQ 876

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           V H R  ++G  +A++ A  G +V R  Y+ D G QI  LA    WR
Sbjct: 877 VSHLRSTLLGTYVANIHASMGCDVVRMNYLGDWGKQIGLLAAG--WR 921


>gi|213584201|ref|ZP_03366027.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 109

 Score = 44.3 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 19/117 (16%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           N   Y+QYAY R  S+FR+A     D+D   L    VI  E      E QL   L ++  
Sbjct: 1   NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPVIISEDR----EAQLAARLLQFEE 51

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSH---------GRENPRLRFVQANNRKL 555
            +        P+ +  YLYD+A +F G + H            N RL+  Q   + L
Sbjct: 52  TLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDAVRNSRLKLAQLTAKTL 108


>gi|328873579|gb|EGG21946.1| arginyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 730

 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEY 505
           K N   Y+ Y+  R  +I R+AK      D +    N+   Q  EF  +E +L+V ++++
Sbjct: 601 KGNTSIYLNYSLTRIATIMRRAK-TERGFDIEEAELNIASFQFQEFTENERRLVVMISKF 659

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++A     P  +  YL+D+A  FH  +           V  ++R+    RL + + 
Sbjct: 660 ADTLKSAEGQLRPAIICDYLWDVADTFHRFYETDT-------VLGSDRQ--HQRLLICNT 710

Query: 566 VASIINSGLNIIGVE 580
           V  I+ +G  ++GVE
Sbjct: 711 VKKILETGFYLLGVE 725



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           +V ++F S N +  +HVGH R   +G+++  ++ + G+EV R  ++ D G 
Sbjct: 208 RVLVDFASPNMSKELHVGHLRSIALGESVCRILEYRGHEVERISHVGDFGT 258


>gi|329939818|ref|ZP_08289119.1| arginyl tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301388|gb|EGG45283.1| arginyl tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 317

 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           R V+  P     G  +TN A+ L+R  G  P  +AE++ AR+     V  V ++G GF+N
Sbjct: 21  RAVVTPPGPGGSGDYATNIALRLAREAGRPPRDVAEILRARLCRADGVADVLVSGPGFLN 80

Query: 91  LYLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           ++L+       L   I   G+ YG +    G +  +  V      P  V   R  VV D+
Sbjct: 81  VHLADDLATSALVRRIRADGVRYGYSEECAGDEPVLLRV------PFDV---RAEVVADS 131

Query: 150 LASLMAFSGYEV 161
           L  ++A  G  V
Sbjct: 132 LVRIIASQGGRV 143



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 25/143 (17%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503
           Q + NP+F V+YA+AR  ++ R    +           +++P+  +   ++ + L+  LA
Sbjct: 192 QRESNPLFRVRYAHARTCALARAGARL-----------HLVPEPGDTAQTDARPLLRALA 240

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMR 559
           EYP  + +A   + P +LA +L   A  F    H     G E P                
Sbjct: 241 EYPHALAHAARHRAPDRLARHLVGTADAFLAVQHTVLPLGDEKPSAAHRARLALAEAA-- 298

Query: 560 LQLVHAVASIINSGLNIIGVESP 582
                   +++  GL+++G+ +P
Sbjct: 299 -------GTVLAGGLSLLGISAP 314


>gi|315605246|ref|ZP_07880292.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313063|gb|EFU61134.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 486

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 35/79 (44%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV I    A   G  HVGH R AV  DTL   +  SGYEVT    + D   +I T +   
Sbjct: 25  KVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILTKSAES 84

Query: 182 FWRYQQALYNNDSDLPEGY 200
            W +    Y  + +  + Y
Sbjct: 85  GWDWWAWAYRFEREFTQAY 103


>gi|17532153|ref|NP_495227.1| aRginyl aa-tRNA syntheTase family member (rrt-2) [Caenorhabditis
           elegans]
 gi|15617714|gb|AAL02449.1|U23169_1 Arginyl aa-trna synthetase protein 2 [Caenorhabditis elegans]
          Length = 512

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           S +E     +GK  ++ ++F S N     HVG+ R  ++G  +  +    G EVT   Y+
Sbjct: 21  SIVEQKYRTVGKSQRIVVDFSSPNIAKQFHVGNLRSTLIGRYVDKVSRVMGNEVTSVNYL 80

Query: 168 NDAGAQINTLALSVFW---RYQQALYNNDSDLPE 198
            D G Q   +A   FW   R     +N+ SD+ +
Sbjct: 81  GDWGTQFAMIA--AFWPQMRPSDQYWNSLSDVEK 112


>gi|317503327|ref|ZP_07961375.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665550|gb|EFV05169.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 1211

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 28/156 (17%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+Q Y +EG L P   K T K ++  ++ L  ST  G  V            Y+ AD   
Sbjct: 675 AQQHYPFEGELAPEALKATGKSEVGYRRELVTSTYEGIPV---------PPAYYPADFI- 724

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G D           G+   L A++  V +  A  NV+   LV    D    KM
Sbjct: 725 -----NEGVDQT--------RGWFFTLHAISTMVFDHVAFKNVISTGLVL---DAKGNKM 768

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           SK  G+      ++D+ G+D VRF M+   NSE  D
Sbjct: 769 SKHVGNVTNPFEMIDKYGADPVRFYMM--TNSEPWD 802


>gi|225389884|ref|ZP_03759608.1| hypothetical protein CLOSTASPAR_03633 [Clostridium asparagiforme
           DSM 15981]
 gi|225044077|gb|EEG54323.1| hypothetical protein CLOSTASPAR_03633 [Clostridium asparagiforme
           DSM 15981]
          Length = 248

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/133 (19%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ Y   R +SI  + ++    +D     + ++P   E   +E  L++ L  Y  V+EN+
Sbjct: 125 YILYTIVRIKSILNKYREDGGQVDETAETKVILPPAGE---TEKALMLLLTRYSEVLENS 181

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+K+  Y+++LA+ F+  +         + +   +       + L+     ++ +
Sbjct: 182 FAETAPHKICQYVFELANAFNSFYHE------TKILSEGDEARKDSYIGLITLARRVLEA 235

Query: 573 GLNIIGVESPNEM 585
            ++++G E+P+ M
Sbjct: 236 CIDVLGFEAPDRM 248


>gi|149002906|ref|ZP_01827817.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758909|gb|EDK65904.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 167

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 83  IAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           +A   ++N +L  S +  ++L ++      Y    IGK   V I+  S N   P  +GH 
Sbjct: 73  VATGPYVNFFLDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHL 132

Query: 142 RCAVVGDTLASLMAFSGYEVTR----EYYINDAG 171
           R  V+GD+L+ +   S  + +R    E  +N+ G
Sbjct: 133 RSTVIGDSLSHIFQKSVIKRSRSTIWETGVNNLG 166


>gi|88811586|ref|ZP_01126840.1| arginyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88790977|gb|EAR22090.1| arginyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 681

 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 83  IAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
           I  KG +INL LS  +L     ++   G  +G N         +++ S N    +H GH 
Sbjct: 115 IETKGMYINLTLSDRWLLDSAQAVAEFGDAFGGNDSHSERTFVVDYSSPNVAKVLHAGHI 174

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           R  ++G  L++L    G  V R  +IND G 
Sbjct: 175 RSTIIGHVLSNLYEACGALVYRVNHINDFGG 205


>gi|318075516|ref|ZP_07982848.1| arginyl tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 314

 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+D    V   +L R+ +  PR    G  + N A++ +      PL +A L+  R++ DP
Sbjct: 22  EVD---SVAADVLARVTVGVPRPGGDGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78

Query: 77  DVDSVFIAGKGFINLYLS-P-SYLRKILSSIVVSGIEYGRNLIG 118
            +  V + G GF+N  L+ P +Y R +++  +     YG  L G
Sbjct: 79  RLADVRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG 120


>gi|332970459|gb|EGK09451.1| ketol-acid reductoisomerase [Kingella kingae ATCC 23330]
          Length = 337

 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 16/120 (13%)

Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379
           +A ++AYF+C           YE G  NM Y +   +++  YV  +E +  A  E  KKA
Sbjct: 217 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGVEVITPATKEAMKKA 276

Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
              +   E  +++ ++G     S  A   +T  H +++VG+  +R MM W   ++L+D D
Sbjct: 277 LYRIQSGEYAKMFIQEGATNYASMTARRRLTADHQIEKVGA-QLRSMMPWIAKNKLVDQD 335


>gi|224983700|pdb|3GDZ|A Chain A, Crystal Structure Of Arginyl-Trna Synthetase From
          Klebsiella Pneumoniae Subsp. Pneumoniae
 gi|224983701|pdb|3GDZ|B Chain B, Crystal Structure Of Arginyl-Trna Synthetase From
          Klebsiella Pneumoniae Subsp. Pneumoniae
 gi|224983702|pdb|3GDZ|C Chain C, Crystal Structure Of Arginyl-Trna Synthetase From
          Klebsiella Pneumoniae Subsp. Pneumoniae
 gi|224983703|pdb|3GDZ|D Chain D, Crystal Structure Of Arginyl-Trna Synthetase From
          Klebsiella Pneumoniae Subsp. Pneumoniae
          Length = 109

 Score = 42.4 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 33/56 (58%)

Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
          G    N    +++ LG  P  +AE +++ + ++   + V IAG GFIN++L P++L
Sbjct: 40 GDYQANGVXAVAKKLGXAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAFL 95


>gi|320095413|ref|ZP_08027091.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977656|gb|EFW09321.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 437

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 34/79 (43%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +V I    A   G  HVGH R AV  DTL   +  SGYEVT    + D   +I T +   
Sbjct: 21  EVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILTKSAQA 80

Query: 182 FWRYQQALYNNDSDLPEGY 200
            W +    Y  + +    Y
Sbjct: 81  GWDWWAWAYRYEREFTSAY 99


>gi|83770024|dbj|BAE60159.1| unnamed protein product [Aspergillus oryzae]
          Length = 538

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 13/95 (13%)

Query: 97  YLRKILSSIVVSGIEYG----------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           Y   IL  I+ +G  YG           N      ++ IEF S N   P   GH R  ++
Sbjct: 14  YENAILPLILQNGNNYGSDHRLGLREPNNPDAGRKRIIIEFGSPNIAKPFRAGHLRSTIL 73

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           G  LA+L   + ++VTR  Y+ D G   N L + V
Sbjct: 74  GGFLANLYEEADWDVTRMNYLGDRG---NVLGVGV 105


>gi|76154141|gb|AAX25642.2| SJCHGC06796 protein [Schistosoma japonicum]
          Length = 156

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P H+GH R AV G+ + ++    G++V    YI D G Q + LA S F +
Sbjct: 36  IDYSSPNIAKPFHLGHFRAAVTGNFVKNINEAFGHKVIGINYIGDWGTQFDILA-SGFSK 94

Query: 185 Y 185
           Y
Sbjct: 95  Y 95


>gi|110736575|dbj|BAF00253.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 272

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 19/171 (11%)

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA 468
           L    + VG  +V++  L  KN+ L ++ F   +    K N   Y+ YA+AR  SI R++
Sbjct: 114 LDQTAEAVGYGAVKYADL--KNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKS 171

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                  D D   +         D   L L  HL  +   +E A     P  L  YLY+L
Sbjct: 172 GK-----DIDELKKTGKLALDHADERALGL--HLLRFAETVEEACTNLLPSVLCEYLYNL 224

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +  F   +S+          Q N       RL L  A A ++    +++G+
Sbjct: 225 SEHFTRFYSN---------CQVNGSPEETSRLLLCEATAIVMRKCFHLLGI 266


>gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 882

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 35/198 (17%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD +  KMSK  G+ I    VV++ G+D++RFM++   N+   D  F   +E+  E  
Sbjct: 517 LIRDALGRKMSKSLGNGIDPLEVVEKYGADALRFMLI-TGNTPGNDMRF---REERLEAS 572

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH----LAEYP 506
             +    +   R I     D+ P               SE D ++L+L +     L+   
Sbjct: 573 RNFANKIWNAARFILMNTDDLDP---------------SEIDENDLKLTLADKWMLSRLQ 617

Query: 507 RVIENATIAQEPY---KLAFYLYDLASVFHGHWSHGRENPRL---------RFVQANNRK 554
           +VIE    A E Y   + A  LYD        W      PRL         R  Q    K
Sbjct: 618 KVIEEVDKAFEKYYFGEAAKVLYDFIWSEFCDWYIELIKPRLYQDKDVMEKRTAQYTGLK 677

Query: 555 LTMMRLQLVHAVASIINS 572
           +    L+L+H V   I  
Sbjct: 678 VLEKILRLLHPVMPFITE 695


>gi|154508503|ref|ZP_02044145.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798137|gb|EDN80557.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
           17982]
          Length = 485

 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 34/79 (43%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV I    A   G  HVGH R AV  DTL   +  SGYEVT    + D   +I   +   
Sbjct: 22  KVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILHKSAEA 81

Query: 182 FWRYQQALYNNDSDLPEGY 200
            W +    Y  + +  + Y
Sbjct: 82  GWDWWAWAYRFEREFTQAY 100


>gi|300727136|ref|ZP_07060555.1| isoleucine--tRNA ligase [Prevotella bryantii B14]
 gi|299775680|gb|EFI72271.1| isoleucine--tRNA ligase [Prevotella bryantii B14]
          Length = 1222

 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 28/156 (17%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+Q Y +EG +       T K + + ++ L  ST  G  V            Y+ AD   
Sbjct: 686 AQQHYPFEGAMNAEALAATGKSEAEYREELVHSTYTGIPVPP---------AYYPADFI- 735

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G D           G+   L A++  V ++ A  NV+   LV    D    KM
Sbjct: 736 -----NEGVDQT--------RGWFFTLHAISTMVFDQVAFKNVISSGLVL---DAKGNKM 779

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           SK  G+      ++D+ G+D VRF ML   NSE  D
Sbjct: 780 SKHVGNVTNPFEMIDKYGADPVRFYML--TNSEPWD 813


>gi|293194132|ref|ZP_06609933.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292819774|gb|EFF78785.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 454

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 34/79 (43%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV I    A   G  HVGH R AV  DTL   +  SGYEVT    + D   +I   +   
Sbjct: 22  KVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILHKSAEA 81

Query: 182 FWRYQQALYNNDSDLPEGY 200
            W +    Y  + +  + Y
Sbjct: 82  GWDWWAWAYRFEREFTQAY 100


>gi|330882951|gb|EGH17100.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 99

 Score = 41.6 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 21/104 (20%)

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRE 541
           PQE E       L   LA++   + N      P+ L  YLYDLA +F   + +    G E
Sbjct: 13  PQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAE 65

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           NP  +            RL+L       +  GL+++G+E+   M
Sbjct: 66  NPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLERM 99


>gi|281424358|ref|ZP_06255271.1| isoleucine--tRNA ligase [Prevotella oris F0302]
 gi|281401627|gb|EFB32458.1| isoleucine--tRNA ligase [Prevotella oris F0302]
          Length = 1211

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 28/156 (17%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+Q Y +EG + P   K T K + + ++ L  ST  G  V            Y+ AD   
Sbjct: 675 AQQHYPFEGEIAPEGLKATGKSEDEYRRELVTSTYEGIPV---------PPAYYPADFI- 724

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G D           G+   L A++  V +  A  NV+   LV    D    KM
Sbjct: 725 -----NEGVDQT--------RGWFFTLHAISTMVFDHVAFKNVISTGLVL---DAKGNKM 768

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           SK  G+      ++D+ G+D VRF M+   NSE  D
Sbjct: 769 SKHVGNVTNPFEMIDKYGADPVRFYMM--TNSEPWD 802


>gi|326403598|ref|YP_004283680.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050460|dbj|BAJ80798.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 449

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 32/55 (58%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           KMSK  G+F T++ V+DE   ++VRF++L      +LDF    + E  +E   FY
Sbjct: 268 KMSKSLGNFRTVQDVLDEAPGEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFY 322


>gi|1572515|gb|AAC44610.1| arginyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 87

 Score = 41.6 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E QL   L ++   +        P+ +  YLYD+A +F G + H         + A N  
Sbjct: 3   EAQLADRLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH------CPILSAENDA 56

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL+LV   A  +  GL+  G+E+   M
Sbjct: 57  VRNSRLKLVQLTAKTLKLGLDTSGIETAERM 87


>gi|187777332|ref|ZP_02993805.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
           15579]
 gi|187774260|gb|EDU38062.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
           15579]
          Length = 645

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 23/131 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  DTLA     +GY+V      ++ G +I  LA +           
Sbjct: 15  PSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEA----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  Y+  +   + D +  +++N   +K++    DY V+ + KI     K 
Sbjct: 64  ------KGVTPKAYVDEIVAGIKDLW--KMMNIDYDKFIRTTDDYHVELVQKI----FKT 111

Query: 252 LNIQHDIFISE 262
           L  + DI+ SE
Sbjct: 112 LCDKGDIYKSE 122


>gi|71033807|ref|XP_766545.1| arginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353502|gb|EAN34262.1| arginyl-tRNA synthetase, putative [Theileria parva]
          Length = 639

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 27/197 (13%)

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVV--DEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           ++V+L  D M      + GD++ L+  V   ++G  S+ F  L  +     +F   ++  
Sbjct: 464 QVVKLVTDHMV-----KRGDYLQLKSPVLSRKIGVGSILFSDLSVEPKSGYNFSIERLMN 518

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q   N +  + Y+Y RC+SI ++ + +         P+  IP     +  E +L + L  
Sbjct: 519 QGY-NLLISILYSYVRCQSILKRCESL---------PQ--IPSNEFRNEYERKLGLVLLG 566

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  +I  +   +EP+++  YL +L+  F+  +    + P    V A++ K+  + L+LV 
Sbjct: 567 FENIIATSISLREPHRVCKYLTNLSREFNQFY---EKTP----VIADD-KVNSLSLKLVK 618

Query: 565 AVASIINSGLNIIGVES 581
             +  I  GL I+ +++
Sbjct: 619 ITSRAIEIGLGILNIQT 635



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 16/117 (13%)

Query: 117 IGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +GK T   V +++ S N    +H+GH R   +G  +++L+ FSG +V R  ++ D G   
Sbjct: 112 VGKLTDETVLVDYFSPNVGKNLHMGHIRSLGIGQAISNLLHFSGSKVIRRNHVGDFG--- 168

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPG----VYLKHVGKELADKYSSELLNFPEE 227
             L   +  RY   +   D+   E   P     V L+   ++L   +S   LNF  +
Sbjct: 169 --LHSGIIMRY---IIEYDTRAMEALNPATCDSVRLRETTRQLVAGFSP--LNFSHD 218


>gi|324512866|gb|ADY45313.1| Arginyl-tRNA synthetase [Ascaris suum]
          Length = 361

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 13/157 (8%)

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           +NSE + F F      ++ N +  +Q  ++R  S+ ++ +++  +LD +  P   +  E 
Sbjct: 217 RNSEYI-FSFNDAFHLNQSNALL-LQMKHSRLVSLEKRNEELMHELDAEKDPE--VALEL 272

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV- 548
           E      +L+ HL ++   + ++    EP ++  YL  LA++       G     LR + 
Sbjct: 273 ELGEETRRLVAHLWQFDEALFSSWQKMEPCRVTVYLLQLANLV------GSAIASLRVMG 326

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++R L+  RL L  A   ++  G+ +IG+E  ++M
Sbjct: 327 EPHDRALS--RLLLFAAARGVLKEGMKLIGLEPLDQM 361


>gi|148244477|ref|YP_001219171.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166229778|sp|A5CX61|SYI_VESOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146326304|dbj|BAF61447.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 955

 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNM--IYVMGSD-HSGYVKRLEAV 370
            +GDDV+     +D    +F + +++F   K  +   N+  +Y+ GSD H G+ +     
Sbjct: 508 FIGDDVNDYDKITDILDVWFDSGMSHFVVLKVRKELSNVADLYLEGSDQHRGWFQSSLIS 567

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A+++K    NVL    V + +DG   KMSK  G+ I+ + +V+ VG+D +R  +
Sbjct: 568 SVAINKKAPYKNVLTHGFV-VDKDGK--KMSKSLGNIISPQKIVNNVGADILRLWI 620


>gi|307171177|gb|EFN63164.1| Probable arginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 57

 Score = 40.8 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           +EF S N   P H+GH R  ++G+ +A++ +F    V +  Y+ D G Q
Sbjct: 5   VEFSSPNIAKPFHLGHLRSTIIGNYIANINSFVENNVKKINYLGDWGTQ 53


>gi|34496043|ref|NP_900258.1| ketol-acid reductoisomerase [Chromobacterium violaceum ATCC 12472]
 gi|50400408|sp|Q7P0H9|ILVC_CHRVO RecName: Full=Ketol-acid reductoisomerase; AltName:
           Full=Acetohydroxy-acid isomeroreductase; AltName:
           Full=Alpha-keto-beta-hydroxylacil reductoisomerase
 gi|34101897|gb|AAQ58264.1| ketol-acid reductoisomerase [Chromobacterium violaceum ATCC 12472]
          Length = 338

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 22/121 (18%)

Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379
           +A ++AYF+C           YE G  NM Y +   +++  YV   E V AA  E  KKA
Sbjct: 218 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVVTAATKEAMKKA 277

Query: 380 QINVLLCELVRLY----RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
              +   E  +++    +   P   ++R    +T  H +++VG++ +R MM W   ++L+
Sbjct: 278 LYRIQSGEYAKMFILEGKTNYPSMTARRR---LTAAHPIEKVGAE-LRAMMPWIAKNKLV 333

Query: 436 D 436
           D
Sbjct: 334 D 334


>gi|18977468|ref|NP_578825.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18266873|sp|P46214|SYI_PYRFU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18893167|gb|AAL81220.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 1066

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 14/116 (12%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ I    VV++ G D+ RF MLW  N  E L F +  V++  +   + +  Y 
Sbjct: 625 KMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVEQVRRMLNILWNVYV 684

Query: 458 YARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            +            +  LD FD  PRNV  +E EF   +  ++  +    + +EN 
Sbjct: 685 LSAT----------YMSLDNFD--PRNVKVEELEFREEDKWILSRVNNLIKEVENG 728


>gi|282859714|ref|ZP_06268815.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587525|gb|EFB92729.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 1220

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 30/207 (14%)

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGI 290
           +V DYS +   KI   DL    +   + ++E    +GDP     D+ID     G +    
Sbjct: 633 VVGDYSQENYDKI---DLHRPFVDDIVLVNE----QGDPMHRESDLIDVWFDSGSMPYAQ 685

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349
           L  P   T  K  ++R        M  D+    L+ S  +Y   A   A+F   +   G 
Sbjct: 686 LHYPFEGTINKDGLER------LGMTEDEYREKLVHS--TYDGIAVPPAFFPADFINEGV 737

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D           G+   L A+A  V +  A  NV+   LV    D    KMSK  G+ I+
Sbjct: 738 DQT--------RGWFFTLHAIATMVFDSVAFKNVISTGLVL---DAKGNKMSKHVGNVIS 786

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++D+ G+D VRF M+   NSE  D
Sbjct: 787 PFEMLDKYGADPVRFYMM--TNSEPWD 811


>gi|302924209|ref|XP_003053837.1| hypothetical protein NECHADRAFT_31699 [Nectria haematococca mpVI
           77-13-4]
 gi|256734778|gb|EEU48124.1| hypothetical protein NECHADRAFT_31699 [Nectria haematococca mpVI
           77-13-4]
          Length = 635

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 30/61 (49%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G   K  +EF S N      V H R  +VG  +A++    G++V +  Y+ D G QI  L
Sbjct: 155 GSKKKAIVEFSSPNMESEFLVSHLRSTLVGSYVANIHTSMGWDVVKMNYLGDWGKQIGLL 214

Query: 178 A 178
           A
Sbjct: 215 A 215


>gi|307111087|gb|EFN59322.1| hypothetical protein CHLNCDRAFT_137710 [Chlorella variabilis]
          Length = 1113

 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K ++ERGF       G D + G+   L  ++ A+ +K A  N L+C  + L  DG   KM
Sbjct: 564 KERFERGFPADFVAEGLDQTRGWFYTLMVLSTALFDKPAFKN-LVCNGLVLAADGK--KM 620

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           SKR  ++     VV++ G+D++R  ++   NS ++  +  K KE+ 
Sbjct: 621 SKRLKNYPDPMEVVNKHGADALRLYLI---NSPVVRAETLKFKEEG 663


>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229558710|sp|B4U9I4|SYC_HYDS0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 488

 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 16/97 (16%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+F+TL+ +  +   D +R ++L+      LDF F K++E  K         AY
Sbjct: 266 KMSKSLGNFVTLKEIYTKYHPDVLRLLVLFTHYRSPLDFSFEKMEETKK---------AY 316

Query: 459 ARCRSIFRQ-------AKDIFPDLDFDLFPRNVIPQE 488
            R +S           AK+  P +D D +      QE
Sbjct: 317 ERLKSAIEDIEPLKAIAKEGKPVVDIDFYSLEKSTQE 353


>gi|304383075|ref|ZP_07365550.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335761|gb|EFM02016.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 1143

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D + G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +    ++D
Sbjct: 654 GVDQTRGWFFTLHAIATMVFDSIAFKNVISTGLVL---DAKGNKMSKRVGNVVNPFDMID 710

Query: 416 EVGSDSVRFMMLWRKNSELLD 436
           + G+D+VRF M+   NSE  D
Sbjct: 711 KYGADAVRFYMM--TNSEPWD 729


>gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
 gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
          Length = 690

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 19/116 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C V  D +A      G++V      ++ G +I   AL+           
Sbjct: 49  PSDKLHIGHSYCTVATDVMARYKRMQGFDVMFLTGTDEHGQKIEQKALAA---------- 98

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                  G  P  Y+  +   + + ++  LLN   ++++    DY V+++ KI +D
Sbjct: 99  -------GVTPQAYVDKIVDGIKELWN--LLNISNDRFVRTTDDYHVESVQKIFKD 145


>gi|242000538|ref|XP_002434912.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215498242|gb|EEC07736.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 120

 Score = 40.0 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           + S + L V LA++   +  A +  EP  +  YLY L+         GR N  L  V+ +
Sbjct: 34  EPSAIALSVELAKFEDAVFGALVELEPCIVVQYLYSLSHAI------GRANKTL-IVKNH 86

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  ++  RL L HA    ++ GL ++G+   N+M
Sbjct: 87  DTTVSSARLLLFHAARLTLSQGLKLLGIPPLNKM 120


>gi|294669508|ref|ZP_06734575.1| hypothetical protein NEIELOOT_01406 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308421|gb|EFE49664.1| hypothetical protein NEIELOOT_01406 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 337

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 16/120 (13%)

Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379
           +A ++AYF+C           YE G  NM Y +   +++  YV   E +  A  E  KKA
Sbjct: 217 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVITPATKEAMKKA 276

Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
              +   E  +++ ++G     S  A   +   H +++VG+  +R MM W   ++L+D D
Sbjct: 277 LYRIQSGEYAKMFIQEGATNYASMTARRRLNADHQIEKVGA-QLRSMMPWIAKNKLVDLD 335


>gi|156097282|ref|XP_001614674.1| arginyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148803548|gb|EDL44947.1| arginyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 977

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 25/200 (12%)

Query: 3   LFADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           L A  + +L+N  K+I  D  +K+ K  L    +E  +        ++  + L   LG  
Sbjct: 91  LHAALNKQLQNVAKQILRDENVKLPKHCL----LEENKLFDQYEYQSSVILFLEHSLGKG 146

Query: 61  PLTIAELI-VARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118
               +E++ + R      +DS+ ++  G +N+ ++ +++ R+ L      G   GR  + 
Sbjct: 147 NDVRSEILRILRGTCADLIDSLHLSPNGILNIRVADAFVVREFLQFYRAGGAHMGRAAVE 206

Query: 119 KGTKVN----------------IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            GT  N                ++F   N    MH+GH +  ++G+ L+++     Y V 
Sbjct: 207 GGTNNNFQKMETPQSGDRHTVLLDFCGVNMAKNMHMGHLKSLLLGNALSNIFRSLNYSVK 266

Query: 163 REYYINDAGAQINTLALSVF 182
              +I D    +  + LS F
Sbjct: 267 CRSHIGDWNMNM-AMVLSFF 285


>gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 483

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 10/90 (11%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+F T R V+ E  ++ VR+ +L R     +DF + K++E +          + 
Sbjct: 264 KMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPIDFSYEKLEEAAT---------SL 314

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            R ++  +Q   +   LD +    N I QE
Sbjct: 315 TRIKNTRKQLAKVLS-LDINSAAENKIEQE 343


>gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 493

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+F TL+ V+D+  +D+VR +ML       LDF F ++  +     +  ++   
Sbjct: 265 KMSKSLGNFYTLKEVLDKYPADAVRLLMLQTHYRAPLDFSFERL--EGTVGTLERMKTCV 322

Query: 459 ARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDT 493
           A  R  ++Q  A+    D D  L     I Q SEFD 
Sbjct: 323 ANLRWAYKQSSAQHELSDADRTLAEAINIAQ-SEFDA 358


>gi|14590903|ref|NP_142976.1| isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647822|sp|O58792|SYI_PYRHO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3257481|dbj|BAA30164.1| 1066aa long hypothetical isoleucyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 1066

 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 14/116 (12%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ I    VV++ G D+ RF MLW  N  E L F +  V++  +   + +  Y 
Sbjct: 625 KMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVEQVRRMLNILWNVYV 684

Query: 458 YARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            +            +  LD FD  PRNV  +E  F   +  ++  +    R +EN 
Sbjct: 685 LSAT----------YMSLDNFD--PRNVKVEELAFREEDKWILSRVNSLIREVENG 728


>gi|195130981|ref|XP_002009929.1| GI14973 [Drosophila mojavensis]
 gi|193908379|gb|EDW07246.1| GI14973 [Drosophila mojavensis]
          Length = 451

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 28/149 (18%)

Query: 453 YVQYAYARCRSIFR--QAK------DIFPDLD-FDLFPRNVIPQESEFDTSELQLIV-HL 502
           Y+ Y  AR  ++ R  QA+      +  P LD  DL   +V+  E E D    QLI  +L
Sbjct: 315 YILYNSARLETLLRTFQAQVNLGVYESLPPLDKIDL---SVL--EDELD---WQLIYGYL 366

Query: 503 AEYPRVIENATIAQ------EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
             +P+V+E +T+AQ        + L  Y+ DLAS+F  ++ H +   + R    N   + 
Sbjct: 367 LTFPKVVE-STLAQLEQGLCAVHSLVRYIVDLASLFSRYYRHKQILVQQR---TNLMPVL 422

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ LV AV  ++NS L ++G+E  + M
Sbjct: 423 YARIYLVKAVRQVLNSALALLGIEPVDYM 451


>gi|291447746|ref|ZP_06587136.1| arginyl tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291350693|gb|EFE77597.1| arginyl tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 360

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 50/218 (22%)

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           P+     AG+ +      + +G D+ R+ +L     +       ++  Q + NP+F V+Y
Sbjct: 164 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 216

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--------------- 501
           A+AR R++ R A      L F   P       + +D S      H               
Sbjct: 217 AHARARALTRGAA----ALGFTAEP-------APYDESPAGPAAHVASPAAQAANAAPAA 265

Query: 502 --------------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                         +A++P V+      + P ++A     L +V H  +      P L  
Sbjct: 266 TTAYDAAARPLLDLIADHPGVLLAGARHRAPDRVA---RQLEAVAHAFFDFHDSCPPLPA 322

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      RL +  A  +++  GL+++G+ +P  +
Sbjct: 323 GDEKPSAAHRARLAIAEAAGTVLAGGLSLLGIRAPEHL 360


>gi|148927744|ref|ZP_01811180.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886907|gb|EDK72441.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 811

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 132 PTGP-MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           P+G  MHVGH R   +GDTLA  M  SGY V      +  G      A+      QQA+ 
Sbjct: 43  PSGAAMHVGHVRNYTIGDTLARHMRMSGYNVLHPMGWDAFGLPAENYAIKTGISPQQAIK 102

Query: 191 NN 192
            N
Sbjct: 103 EN 104


>gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 508

 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           KMSK  G+F TL+ V+D   +D VR +ML       LDF F ++K
Sbjct: 266 KMSKSLGNFYTLKDVLDTYSADEVRLLMLQTHYRAPLDFSFERLK 310


>gi|225024862|ref|ZP_03714054.1| hypothetical protein EIKCOROL_01750 [Eikenella corrodens ATCC
           23834]
 gi|224942391|gb|EEG23600.1| hypothetical protein EIKCOROL_01750 [Eikenella corrodens ATCC
           23834]
          Length = 337

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 16/118 (13%)

Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379
           +A ++AYF+C           YE G  NM Y +   +++  YV   E +  A  E  KKA
Sbjct: 217 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVITPATKEAMKKA 276

Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              +   E  +++ ++G     S  A   +T  H +++VG+  +R MM W   ++L+D
Sbjct: 277 LYRIQSGEYAKMFIQEGATNYASMTARRRLTADHQIEKVGA-QLRSMMPWIAKNKLVD 333


>gi|221194861|ref|ZP_03567918.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185765|gb|EEE18155.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 513

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           KMSK  G+F TL+ V+D   +D+VR +ML       LDF F
Sbjct: 265 KMSKSLGNFYTLKEVLDSYSADAVRLLMLQTHYRASLDFSF 305


>gi|83815822|ref|YP_444601.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757216|gb|ABC45329.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 1080

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +E  F       G D + G+   L A+A  V ++ A  NV++  LV L  DG   KMSK 
Sbjct: 554 FEANFPADFIAEGVDQTRGWFYSLHAIATVVFDEVAYENVVVNGLV-LDEDGN--KMSKS 610

Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427
            G+ +    V+D+ G+D VR+ M+
Sbjct: 611 VGNTVEPFEVIDDYGADVVRWFMM 634


>gi|41615033|ref|NP_963531.1| leucyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|48428516|sp|P61760|SYL_NANEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|40068757|gb|AAR39092.1| NEQ239 [Nanoarchaeum equitans Kin4-M]
          Length = 977

 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           KMSK  G+FIT+R  +   G D+VR    +  N+EL+D
Sbjct: 699 KMSKSKGNFITIREAIQRYGRDAVRLAAAYAGNAELVD 736


>gi|294506347|ref|YP_003570405.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294342675|emb|CBH23453.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 1080

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +E  F       G D + G+   L A+A  V ++ A  NV++  LV L  DG   KMSK 
Sbjct: 554 FEANFPADFIAEGVDQTRGWFYSLHAIATVVFDEVAYENVVVNGLV-LDEDGN--KMSKS 610

Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427
            G+ +    V+D+ G+D VR+ M+
Sbjct: 611 VGNTVEPFEVIDDYGADVVRWFMM 634


>gi|226939092|ref|YP_002794163.1| ketol-acid reductoisomerase [Laribacter hongkongensis HLHK9]
 gi|254803574|sp|C1DA41|ILVC_LARHH RecName: Full=Ketol-acid reductoisomerase; AltName:
           Full=Acetohydroxy-acid isomeroreductase; AltName:
           Full=Alpha-keto-beta-hydroxylacil reductoisomerase
 gi|226714016|gb|ACO73154.1| IlvC [Laribacter hongkongensis HLHK9]
          Length = 338

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 22/121 (18%)

Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379
           +A ++AYF+C           YE G  NM Y +   +++  YV   E + AA  E  KKA
Sbjct: 218 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVITAASKEAMKKA 277

Query: 380 QINVLLCELVRLY----RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
              +   E  +++    +   P   ++R    +T  H +++VG++ +R MM W   ++L+
Sbjct: 278 LYRIQSGEYAKMFILEGKTNYPSMTARRR---LTADHPIEKVGAE-LRAMMPWIAKNKLV 333

Query: 436 D 436
           D
Sbjct: 334 D 334


>gi|239944278|ref|ZP_04696215.1| putative arginyl-tRNA synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|239990733|ref|ZP_04711397.1| putative arginyl-tRNA synthetase [Streptomyces roseosporus NRRL
           11379]
          Length = 382

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 50/218 (22%)

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           P+     AG+ +      + +G D+ R+ +L     +       ++  Q + NP+F V+Y
Sbjct: 186 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 238

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--------------- 501
           A+AR R++ R A      L F   P       + +D S      H               
Sbjct: 239 AHARARALTRGAA----ALGFTAEP-------APYDESPAGPAAHVASPAAQAANAAPAA 287

Query: 502 --------------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                         +A++P V+      + P ++A     L +V H  +      P L  
Sbjct: 288 TTAYDAAARPLLDLIADHPGVLLAGARHRAPDRVA---RQLEAVAHAFFDFHDSCPPLPA 344

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      RL +  A  +++  GL+++G+ +P  +
Sbjct: 345 GDEKPSAAHRARLAIAEAAGTVLAGGLSLLGIRAPEHL 382


>gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica]
 gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica]
          Length = 532

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 18/171 (10%)

Query: 347 RGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +GFD +   ++++G D    ++R  A+        A I      LV  +      KMSK 
Sbjct: 259 QGFDTVSEAVHIVGKD----IQRFHAIYWPAFLLAAGIKPPKSVLVHSHWISEGQKMSKS 314

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ +   HV+ + GSDSVRF+++   +    D DF + K   K N +   +        
Sbjct: 315 IGNVVDPMHVISKYGSDSVRFLLMCDGHLH-KDNDFTETKIAEKHNTMLVNKLG----NL 369

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQE------SEFDTSELQLIVHLAEYPRV 508
           + R     F  +D    PR    ++       EF T+  +LI  L E P V
Sbjct: 370 LMRITSAKFNLVDSLEQPRQKTVEDMAEFFGPEFTTTRNELIRALKELPDV 420


>gi|114327800|ref|YP_744957.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327235|sp|Q0BT18|SYC_GRABC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114315974|gb|ABI62034.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 470

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +T+R ++ +   +++R + L      +LDF +  +KE  KE   FY     
Sbjct: 288 KMSKSLGNVLTVRDLLGQADGEAIRLLFLKTHYRGVLDFRYEALKEAGKELDRFY----- 342

Query: 459 ARCRSIFRQAKDIFPDLD 476
              R++  QA    PDLD
Sbjct: 343 ---RAL--QAHPALPDLD 355


>gi|289450479|ref|YP_003475345.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185026|gb|ADC91451.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 1071

 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +E  F         D + G+   L A++  + ++    NV++  LV+  +DG  IKMSK 
Sbjct: 568 FEANFPAQFISEAQDQTRGWFYSLMAISTLLFDRTPYENVIVMGLVQ-DKDG--IKMSKH 624

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-FDFCKVKEQSKE-------NPVFYVQ 455
            G+ I+ +  +D +GSD+VR+      N  L   F F  V E  +           FY+ 
Sbjct: 625 KGNVISPQEAIDRMGSDAVRWYFYTNSNPWLPSRFSFDSVAEGQRRFMGTLWNTYAFYIL 684

Query: 456 YA 457
           YA
Sbjct: 685 YA 686


>gi|148260406|ref|YP_001234533.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|187629816|sp|A5FYD2|SYC_ACICJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146402087|gb|ABQ30614.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 449

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           KMSK  G+F T++ V+ E   ++VRF++L      +LDF    + E  +E   FY
Sbjct: 268 KMSKSLGNFRTVQDVLGEAPGEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFY 322


>gi|228470963|ref|ZP_04055808.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
 gi|228307360|gb|EEK16374.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
          Length = 1137

 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D + G+   L A+A       A  NVL+  LV L +DG   KMSKR G+ +    V+ 
Sbjct: 650 GVDQTRGWFFTLHAIATMTQGSIAFRNVLVNGLV-LDKDGN--KMSKRLGNAVDPFGVIQ 706

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   N  E + FD   V+E S++
Sbjct: 707 QYGSDPLRWYMITNANPWENIRFDPKGVEEVSRK 740


>gi|119719481|ref|YP_919976.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524601|gb|ABL77973.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 977

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK AG+FI LR  ++  G+D+ RF   +  NS L D +F + +  SK   + Y  Y +
Sbjct: 658 KMSKSAGNFILLREALEYWGADATRFAEAYAGNSGLDDGNF-EPEVASKAVDLLYEWYEF 716

Query: 459 A 459
           A
Sbjct: 717 A 717


>gi|299140905|ref|ZP_07034043.1| isoleucine--tRNA ligase [Prevotella oris C735]
 gi|298577871|gb|EFI49739.1| isoleucine--tRNA ligase [Prevotella oris C735]
          Length = 1211

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 28/156 (17%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+Q Y +EG +     K T K + + ++ L  ST  G  V            Y+ AD   
Sbjct: 675 AQQHYPFEGEIASEGLKATGKSEEEYRRELVTSTYEGIPV---------PPAYYPADFI- 724

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G D           G+   L A++  V +  A  NV+   LV    D    KM
Sbjct: 725 -----NEGVDQT--------RGWFFTLHAISTMVFDHVAFKNVISTGLVL---DAKGNKM 768

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           SK  G+      ++D+ G+D VRF M+   NSE  D
Sbjct: 769 SKHVGNVTNPFEMIDKYGADPVRFYMI--TNSEPWD 802


>gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
 gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
          Length = 650

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 19/116 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH  C V  D +A      GY+V      ++ G +I   A             
Sbjct: 15  PSGKAHIGHSYCTVATDAIARYKRMQGYDVMFLTGTDEHGQKIELNAAKA---------- 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                  G  P  Y+  +     + +  +LLN   ++++    DY V+A+ KI ++
Sbjct: 65  -------GVTPKEYVDEIVAGFQELW--KLLNISNDRFIRTTDDYHVKAVQKIFKE 111


>gi|333030518|ref|ZP_08458579.1| Isoleucyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741115|gb|EGJ71597.1| Isoleucyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 1141

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D + G+   L A+A  V + KA  NV+   LV L ++G   KMSKR G+ +   H ++
Sbjct: 649 GVDQTRGWFFTLHAIATMVFDTKAYKNVISNGLV-LDKNGN--KMSKRLGNGVDPFHAIE 705

Query: 416 EVGSDSVRFMML 427
           + GSD +R+ M+
Sbjct: 706 KYGSDPLRWYMV 717


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 17/129 (13%)

Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD H G+ +     + AV+ K    +VL    V    DG   KMSK  G+ +  +
Sbjct: 566 MYLEGSDQHRGWFQSSLLTSVAVTGKAPYRSVLTHGYVL---DGEGRKMSKSLGNVVVPQ 622

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY--AYARCRSIFRQAK 469
            V+D+ G+D VR   LW  +S+         K+  + +PV   Q   AY + R+  R   
Sbjct: 623 EVIDQYGADIVR---LWAASSDY--------KQDVRISPVILKQLAEAYRKVRNTIRYIL 671

Query: 470 DIFPDLDFD 478
               D D++
Sbjct: 672 GNTHDFDYE 680


>gi|124783875|gb|ABN14954.1| arginyl-tRNA synthetase [Taenia asiatica]
          Length = 207

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKG 87
           V+ R      G    N  + L+R    D     P+  A+ I   +     ++ V IAG G
Sbjct: 89  VMTRSSHPNFGDYQCNNGLSLARKFSADGTKISPVEAAKKICEHLVKGLLIEKVDIAGPG 148

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           FIN+++S  ++ + ++ +V  G  +      +  K  ++  S N    MHVGH R  ++
Sbjct: 149 FINIFISRCFVEEEVNKLVRLG--FSLPPPQRRLKCIVDMSSPNIAKEMHVGHLRSTII 205


>gi|260907530|ref|ZP_05915852.1| arginyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 101

 Score = 38.9 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 30  DRI---VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           DRI    + R +   HGH  +  A+  +  +  D  ++A  I +R+  D  +  V +AG 
Sbjct: 26  DRIPEPTLRRGQTPRHGHWVSPIALRSAGAVHTDSRSLAVEIASRLHDDASIAEVEVAGP 85

Query: 87  GFINLYLSPSYLRKI 101
           GF+N+ L+PS L  I
Sbjct: 86  GFLNITLTPSALAVI 100


>gi|72162825|ref|YP_290482.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71916557|gb|AAZ56459.1| similar to Arginyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 416

 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 31/70 (44%)

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ L  YL  LA+ +H  W      P        +      RL L  A A ++ +GL 
Sbjct: 347 HQPHILVRYLESLAAAYHEWWESHSVLPGHEGTADTHTTTVAARLDLCAAAAGVLRAGLL 406

Query: 576 IIGVESPNEM 585
           +IGV +P  +
Sbjct: 407 LIGVSAPTRL 416


>gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 965

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV +K     V L +LVR   D    KMSK  G+ I    +VDE G+D++
Sbjct: 579 WVARMMMMQQAVVDKDPFHTVYLHQLVR---DEKGHKMSKTKGNVIDPLEIVDEFGADAL 635

Query: 423 RFMM 426
           RF M
Sbjct: 636 RFTM 639


>gi|256081682|ref|XP_002577097.1| arginyl-tRNA synthetase [Schistosoma mansoni]
 gi|238662392|emb|CAZ33334.1| arginyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 494

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +++ S N   P H+GH R  V G+ + ++    G++V    YI D G Q + LA S F
Sbjct: 34  VVVDYSSPNIAKPFHLGHFRATVTGNFVKNVNEAFGHKVIGINYIGDWGTQFDILA-SGF 92

Query: 183 WRY 185
            +Y
Sbjct: 93  SKY 95


>gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 665

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GYEV     +++ G +I T A             
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGYEVFYLTGLDEHGQKIQTKAAEA---------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+ ++ K++ D +  +LL+    K++    DY  + +  +     + 
Sbjct: 64  -------GISPQTYVDNMAKDVKDLW--QLLDISYNKFIRTTDDYHEEVVAAV----FEK 110

Query: 252 LNIQHDIFISE 262
           L  Q DI++ E
Sbjct: 111 LLAQDDIYLGE 121


>gi|114567117|ref|YP_754271.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317896|sp|Q0AWK4|SYL_SYNWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114338052|gb|ABI68900.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 824

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%)

Query: 381 INVLLCE--LVRLYRDGMPIK----MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           INVL C+    RL   GM +K    MSK  G+ ++   ++D  G+D+ R  +L+    E 
Sbjct: 557 INVLSCQEPFTRLLTQGMVLKDNAKMSKSKGNVVSPEEIIDTYGADTARLFILFASPPE- 615

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-----FPDLD 476
            D ++    EQ  E    ++   +     +    KD+     FP+LD
Sbjct: 616 RDLEW---SEQGVEGAFRFLNRVWRLVSELAEGIKDLPAAEHFPELD 659


>gi|260906190|ref|ZP_05914512.1| arginyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 300

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 42/92 (45%)

Query: 7  FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + L   L  I     ++   +    + R +   HGH  +  A+  +  +  D  ++A 
Sbjct: 6  LQTALARALASIASARGIDSDRIPEPTLRRGQTPRHGHWVSPIALRSAGAVHTDSRSLAV 65

Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           I +R+  D  +  V +AG GF+N+ L+PS L
Sbjct: 66 EIASRLHDDASIAEVEVAGPGFLNITLTPSAL 97


>gi|84686162|ref|ZP_01014057.1| valyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665689|gb|EAQ12164.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 1030

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 11/77 (14%)

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           GFD + +        +V R+  +  AV EK+    V L +LVR   D    KMSK  G+ 
Sbjct: 636 GFDILFF--------WVARMMMMQLAVVEKEPFHTVYLHQLVR---DEKGKKMSKTTGNV 684

Query: 408 ITLRHVVDEVGSDSVRF 424
           I    ++DE G+D++RF
Sbjct: 685 IDPLEIIDEYGADALRF 701


>gi|152964879|ref|YP_001360663.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082067|sp|A6W6G0|SYC_KINRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151359396|gb|ABS02399.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 471

 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 24/48 (50%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           +V I    A P G  H+GH R  VV D L   +  SGYEVT    + D
Sbjct: 23  QVGIYVCGATPQGSPHLGHVRAQVVFDVLRRWLVRSGYEVTLVRNVTD 70


>gi|182678882|ref|YP_001833028.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|229558617|sp|B2IEE1|SYC_BEII9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182634765|gb|ACB95539.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 458

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           KMSK  G+F+T+R V+ +   ++VRF ML     + +D+    ++E  +E   +Y
Sbjct: 269 KMSKSLGNFLTIRDVLKDWPGETVRFTMLKTHYRQPIDWTLSSLRESQRELDRWY 323


>gi|167623065|ref|YP_001673359.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082332|sp|B0TJA9|SYI_SHEHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167353087|gb|ABZ75700.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 940

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGSD-HSGYVKRL 367
           S ++GD+ D+    +D    ++ +   +      R    G D  +Y+ GSD H G+    
Sbjct: 517 SELLGDEADQYRKVTDTLDVWYDSGSTFSTVVAARPEFHGHDIDLYLEGSDQHRGWFMSS 576

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             ++ A++ K     VL         DG   KMSK  G+ I+ +HV +++G+D +R  +
Sbjct: 577 LMISTAMNGKAPYKQVLTHGFTV---DGQGRKMSKSVGNVISPQHVTNKLGADILRLWV 632


>gi|300120333|emb|CBK19887.2| unnamed protein product [Blastocystis hominis]
          Length = 1092

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +E  F       G D + G+   L  ++ A+ +K A  NV++  LV L  DG   KMSKR
Sbjct: 559 FEANFPAQFIAEGLDQTRGWFYTLMVLSTALFDKPAWKNVIVNGLV-LAEDGK--KMSKR 615

Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427
             ++   + ++D+ G+DSVR  ++
Sbjct: 616 LKNYPDPQTIIDKYGADSVRLYLI 639


>gi|15616769|ref|NP_239981.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134943|sp|P57249|SYI_BUCAI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25293003|pir||C84947 isoleucine-tRNA ligase (EC 6.1.1.5) [imported] - Buchnera sp.
           (strain APS)
 gi|10038832|dbj|BAB12867.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +++ GSD H G+      ++  +SEKK    VL    V    DG   KMSK  G+ I+  
Sbjct: 560 MFLEGSDQHRGWFMSSLIISTLISEKKPYSEVLTHGFVV---DGKGQKMSKSIGNTISPN 616

Query: 412 HVVDEVGSDSVRFMM 426
            +VD +G+D +R  +
Sbjct: 617 EIVDTLGADILRLWV 631


>gi|219681524|ref|YP_002467909.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682080|ref|YP_002468464.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471205|ref|ZP_05635204.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782372|sp|B8D8V0|SYI_BUCA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782373|sp|B8D754|SYI_BUCAT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219621813|gb|ACL29969.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624367|gb|ACL30522.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086464|gb|ADP66545.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087045|gb|ADP67125.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +++ GSD H G+      ++  +SEKK    VL    V    DG   KMSK  G+ I+  
Sbjct: 560 MFLEGSDQHRGWFMSSLIISTLISEKKPYSEVLTHGFVV---DGKGQKMSKSIGNTISPN 616

Query: 412 HVVDEVGSDSVRFMM 426
            +VD +G+D +R  +
Sbjct: 617 EIVDTLGADILRLWV 631


>gi|269114822|ref|YP_003302585.1| Valyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322447|emb|CAX37182.1| Valyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 839

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 12/105 (11%)

Query: 332 TYFAADLAYF--------KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQIN 382
           T+F++ LA F        K K +R F   + V G D    +V R+   +    ++K   +
Sbjct: 439 TWFSSGLAPFVFLGWPQDKSKLKRYFPTSLLVTGYDIIFFWVARMYFFSLYFMDQKPFEH 498

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +LL  LVR   D    KMSK  G+ I    V+DE GSD +R  ++
Sbjct: 499 LLLHGLVR---DSQGRKMSKSLGNGINPIQVIDEYGSDVLRMSLI 540


>gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 490

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           KMSK  G+F TL+ V+D   +D+VR +ML       LDF F
Sbjct: 265 KMSKSLGNFYTLKEVLDAYPADAVRLLMLQTHYRAPLDFSF 305


>gi|170758335|ref|YP_001785405.1| methionyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405324|gb|ACA53735.1| methionine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 645

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  DTLA     +GY+V      ++ G +I  LA +           
Sbjct: 15  PSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEA----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+  +   + D +  +++N   +K++    +Y V+ + KI     K 
Sbjct: 64  ------EKVTPKAYVDEIVAGIKDLW--KIMNIDYDKFIRTTDEYHVELVQKI----FKT 111

Query: 252 LNIQHDIFISE 262
           L  + DI+ SE
Sbjct: 112 LYDKGDIYKSE 122


>gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 606

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +G KV +  +   P+G +H+GH R   +GD +A  + F GY V
Sbjct: 28  EGKKVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGYRV 70


>gi|298709584|emb|CBJ31410.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1193

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K K+E+ F       G D + G+   L  + AA+ +K A  N+++  LV L  DG   KM
Sbjct: 566 KDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLV-LASDGK--KM 622

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SKR  ++     V+D  G+D++R  ++   NS ++  +  K KE+  +  V  V   +  
Sbjct: 623 SKRLKNYPDPMKVIDSHGADALRLYLI---NSPVVRAESLKFKEEGVQATVREVLLPWFN 679

Query: 461 CRSIFRQ 467
               F Q
Sbjct: 680 AFRFFVQ 686


>gi|15603527|ref|NP_246601.1| isoleucyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81636547|sp|Q9CKF7|SYI_PASMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12722068|gb|AAK03746.1| IleS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 932

 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 14/129 (10%)

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGS 358
           D+D  +LL      G D D  +   D    +F +   Y+    +R    G +  +Y+ GS
Sbjct: 511 DLDTAELL------GADADNYIKVPDTLDVWFDSGSTYYSVVKDRPEFNGQEADMYLEGS 564

Query: 359 D-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D H G+      ++ A   K     VL         DG   KMSK  G+ +T + V+D+ 
Sbjct: 565 DQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTV---DGQGRKMSKSIGNIVTPQEVMDKF 621

Query: 418 GSDSVRFMM 426
           G D +R  +
Sbjct: 622 GGDILRLWV 630


>gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 454

 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 27/49 (55%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           KMSK  G+F TLR ++ +   D VRF +L       LDFD  K++   K
Sbjct: 239 KMSKSLGNFFTLRQILKKFSGDVVRFYLLSTHYRSPLDFDDTKLEAAQK 287


>gi|294631394|ref|ZP_06709954.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834727|gb|EFF93076.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 221

 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           +R+V+  P     G  +TN A+ L+RP G   L +A+++   +     +  V + G GF+
Sbjct: 29  ERVVVTPPGAGGCGDYATNVALQLARPAGQPALRVADVLRGHLLNLDGIRDVSVTGPGFL 88

Query: 90  NLYL--SPSYLRKILSSIVVSGIEYG 113
           N+ L    +  ++++  I+  G  YG
Sbjct: 89  NISLRAGDAGAQRLVEEILRRGQRYG 114


>gi|188997007|ref|YP_001931258.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|259511518|sp|B2V9T1|SYI_SULSY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188932074|gb|ACD66704.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 939

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 23/159 (14%)

Query: 353 IYVMGSD-HSGYVKR--LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+ GSD H G+ +   LE+VA   S  +A  + +L     L   G   KMSK AG+ + 
Sbjct: 560 MYLEGSDQHRGWFQSSLLESVA---SYNRAPYDTVLTHGFTLDEKGR--KMSKSAGNVVA 614

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--- 466
              V+ E G+D +R  ++    +E +   F  +K  +++         Y + R+ FR   
Sbjct: 615 PEKVIKEYGADILRLWVVTEDYTEDIKIGFNLIKRIAED---------YRKIRNTFRYFL 665

Query: 467 -QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
               D  P+ D+   P   + +   +  S+LQ I+ +A+
Sbjct: 666 GNLYDFNPNQDY--VPYENLLEIDRWMLSKLQNIIQIAD 702


>gi|57239215|ref|YP_180351.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|161598454|ref|YP_197385.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161294|emb|CAH58215.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1104

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +K + DD+KAL    DI I  DD HR         IDNL R           P  K
Sbjct: 504 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 548

Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   D     F S +M    +  P    +    YF AD         RG+   ++V+
Sbjct: 549 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 608

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                         + A+ +K    N + C  V L   G   K+SKR  ++     +  +
Sbjct: 609 --------------STALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 651

Query: 417 VGSDSVRFMML 427
            GSD++RF+ML
Sbjct: 652 YGSDAMRFLML 662


>gi|84029517|sp|Q5FH91|SYI_EHRRG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1118

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +K + DD+KAL    DI I  DD HR         IDNL R           P  K
Sbjct: 517 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 561

Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   D     F S +M    +  P    +    YF AD         RG+   ++V+
Sbjct: 562 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 621

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +              A+ +K    N + C  V L   G   K+SKR  ++     +  +
Sbjct: 622 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 664

Query: 417 VGSDSVRFMML 427
            GSD++RF+ML
Sbjct: 665 YGSDAMRFLML 675


>gi|161986610|ref|YP_196426.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1105

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +K + DD+KAL    DI I  DD HR         IDNL R           P  K
Sbjct: 504 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 548

Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   D     F S +M    +  P    +    YF AD         RG+   ++V+
Sbjct: 549 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 608

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                         + A+ +K    N + C  V L   G   K+SKR  ++     +  +
Sbjct: 609 --------------STALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 651

Query: 417 VGSDSVRFMML 427
            GSD++RF+ML
Sbjct: 652 YGSDAMRFLML 662


>gi|84029518|sp|Q5HB43|SYI_EHRRW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1117

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +K + DD+KAL    DI I  DD HR         IDNL R           P  K
Sbjct: 517 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 561

Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   D     F S +M    +  P    +    YF AD         RG+   ++V+
Sbjct: 562 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 621

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +              A+ +K    N + C  V L   G   K+SKR  ++     +  +
Sbjct: 622 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 664

Query: 417 VGSDSVRFMML 427
            GSD++RF+ML
Sbjct: 665 YGSDAMRFLML 675


>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 484

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           KMSK  G+F T+R ++ E   D VR+ +L +     +DF+F +V+   K
Sbjct: 266 KMSKSLGNFFTVREILKEFKPDEVRYFLLTKHYRSPIDFNFEEVEAARK 314


>gi|58416839|emb|CAI27952.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1125

 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +K + DD+KAL    DI I  DD HR         IDNL R           P  K
Sbjct: 524 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 568

Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   D     F S +M    +  P    +    YF AD         RG+   ++V+
Sbjct: 569 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 628

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +              A+ +K    N + C  V L   G   K+SKR  ++     +  +
Sbjct: 629 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 671

Query: 417 VGSDSVRFMML 427
            GSD++RF+ML
Sbjct: 672 YGSDAMRFLML 682


>gi|58417799|emb|CAI27003.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1124

 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%)

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +K + DD+KAL    DI I  DD HR         IDNL R           P  K
Sbjct: 524 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 568

Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   D     F S +M    +  P    +    YF AD         RG+   ++V+
Sbjct: 569 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 628

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +              A+ +K    N + C  V L   G   K+SKR  ++     +  +
Sbjct: 629 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 671

Query: 417 VGSDSVRFMML 427
            GSD++RF+ML
Sbjct: 672 YGSDAMRFLML 682


>gi|330836491|ref|YP_004411132.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748394|gb|AEC01750.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 1044

 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
           G   Y   +  YF+  +   F N     G D + G+   L  +AAA+ EK A +N ++  
Sbjct: 532 GELHYPFENKEYFETHFPADFINE----GLDQTRGWFYTLTIIAAALFEKPAFLNCIVNG 587

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++ L  DG   KMSK   ++     +V + G+D++RF ++   NS +   D  K  E S
Sbjct: 588 II-LAADGK--KMSKSEHNYTDPMEIVKQYGADALRFSLM---NSNVTHADDLKFSEDS 640


>gi|302800117|ref|XP_002981816.1| hypothetical protein SELMODRAFT_421269 [Selaginella moellendorffii]
 gi|300150258|gb|EFJ16909.1| hypothetical protein SELMODRAFT_421269 [Selaginella moellendorffii]
          Length = 855

 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 22/136 (16%)

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLA 503
           K N   Y+ YAYAR  SI R++     +          I Q  E       E  L +HL 
Sbjct: 733 KGNTAVYLFYAYARVCSIIRKSGRSIDE----------IKQTCELVVEHPHERSLRLHLI 782

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +E++     P  L  YLY L+ +F   ++  +    L+            RL L 
Sbjct: 783 QFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCKVTRSLQEAS---------RLLLC 833

Query: 564 HAVASIINSGLNIIGV 579
            A   I   GL ++G+
Sbjct: 834 EATRLITKQGLELLGL 849


>gi|91782599|ref|YP_557805.1| ketol-acid reductoisomerase [Burkholderia xenovorans LB400]
 gi|296160616|ref|ZP_06843431.1| ketol-acid reductoisomerase [Burkholderia sp. Ch1-1]
 gi|116248122|sp|Q142I6|ILVC_BURXL RecName: Full=Ketol-acid reductoisomerase; AltName:
           Full=Acetohydroxy-acid isomeroreductase; AltName:
           Full=Alpha-keto-beta-hydroxylacil reductoisomerase
 gi|91686553|gb|ABE29753.1| ketol-acid reductoisomerase [Burkholderia xenovorans LB400]
 gi|295889142|gb|EFG68945.1| ketol-acid reductoisomerase [Burkholderia sp. Ch1-1]
          Length = 338

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 24/122 (19%)

Query: 334 FAADLAYFKCK----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +A ++AYF+C           YE G  NM Y + S+++ Y + +       +E K  +  
Sbjct: 218 YAPEMAYFECLHELKLIVDLIYEGGIANMNYSI-SNNAEYGEYVTGPRIVTAETKKAMKA 276

Query: 384 LLCEL---------VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +L ++         +   + G P   S+R    +T  H +++VGS  +R MM W   ++L
Sbjct: 277 VLTDIQTGEYAKSFILENKAGAPTLQSRRR---LTAEHQIEQVGS-KLRAMMPWIAKNKL 332

Query: 435 LD 436
           +D
Sbjct: 333 VD 334


>gi|332296159|ref|YP_004438082.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 875

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 12/127 (9%)

Query: 332 TYFAADLAYFKC--------KYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQIN 382
           T+F++ L  F          + ++ F   + V G D    +V R+  ++ A++ K+   N
Sbjct: 449 TWFSSSLWPFSTMGWPDNTPELKKFFPTSVLVTGFDIIYFWVARMIMMSIALTGKEPFKN 508

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V++  LVR   D    KMSK  G+ I    +++E G+D++RF +    N    D    K 
Sbjct: 509 VIIHGLVR---DSQGRKMSKSVGNVIDPMDIIEESGADALRFSLASLSNPAGQDIKMSKE 565

Query: 443 KEQSKEN 449
           K +   N
Sbjct: 566 KVKGARN 572


>gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 666

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 23/131 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A             
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAAEA---------- 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+ ++ K++ D +  +LL+   +K++    DY  + +  +     + 
Sbjct: 65  -------GISPQTYVDNMAKDVKDLW--QLLDISYDKFIRTTDDYHEEVVAAV----FEK 111

Query: 252 LNIQHDIFISE 262
           L  Q DI++ E
Sbjct: 112 LLAQDDIYLGE 122


>gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 665

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 23/131 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A             
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAAEA---------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+ ++ K++ D +  +LL+   +K++    DY  + +  +     + 
Sbjct: 64  -------GISPQTYVDNMAKDVKDLW--QLLDISYDKFIRTTDDYHEEVVAAV----FEK 110

Query: 252 LNIQHDIFISE 262
           L  Q DI++ E
Sbjct: 111 LLAQDDIYLGE 121


>gi|291522237|emb|CBK80530.1| Protein of unknown function (DUF3048) [Coprococcus catus GD/7]
          Length = 363

 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 125 IEFVSANPTGPMHVGHCRCA---VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           I+F + N    +H G  + A   +  D + ++   SGYE    Y  +D  A  N      
Sbjct: 142 IDFANDNDAIYVHYGQSKYALSRIEDDNIMTIHGLSGYESKVFYRSSDRKAPHNVYTTGK 201

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
                  +     D P GY P +   HV  EL D  +++ +N P
Sbjct: 202 MLAEGLEVTGLTRDYPAGYTPRLQFNHVDTELKDGINAQKVNIP 245


>gi|330444673|ref|YP_004377659.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807783|gb|AEB41956.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 1066

 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +E  F       G D + G+   L  +AAA+ ++ A  NV++  ++ L  DG   KMSKR
Sbjct: 543 FENAFPADFISEGLDQTRGWFYTLTVIAAALFDRPAFRNVIVNGII-LAEDGN--KMSKR 599

Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427
             ++ + + ++D  G+D++R  +L
Sbjct: 600 LNNYPSPKSILDSYGADALRLYLL 623


>gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 845

 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 61/242 (25%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR--------------------------EY 165
           P+G +H+GH R   +GD LA   +  GY V                            E 
Sbjct: 43  PSGKIHMGHVRNYTIGDVLARYKSLQGYNVLHPMGWDSFGMPAENAARQNNLSPKDWTES 102

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
            I++  +Q+  L LS+ W  + +  + D           Y KH  +   + Y   L+   
Sbjct: 103 NISNMKSQLKRLGLSIDWDREISTCSVD-----------YYKHQQEFFLELYDKGLVYRK 151

Query: 226 EE--KWLPIVKDYSVQAMMKII---------RDDLKALN--------IQHDIFISEDDFH 266
           E+   W P+  D +V A  ++I         + + K LN          +++  S D   
Sbjct: 152 EQDVNWDPV--DQTVLANEQVIDGKGWRSGAQVERKKLNQWFFNITKFSNELLESLDTLD 209

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ--KCDMDRKQLLFRSTMVGDDVDRPL 324
           +  P+ ++ +  N   + +  E   P   SK  +  KC   R   LF  + +   VD PL
Sbjct: 210 QW-PNKVKIMQKNWIGKSFGCEVKFPISSSKDVREIKCFTTRPDTLFGLSFLALSVDHPL 268

Query: 325 LK 326
            K
Sbjct: 269 SK 270


>gi|329118886|ref|ZP_08247581.1| ketol-acid reductoisomerase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464914|gb|EGF11204.1| ketol-acid reductoisomerase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 337

 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 16/120 (13%)

Query: 334 FAADLAYFKCK----------YERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379
           +A ++AYF+C           YE G  NM Y +   +++  YV  +E + +   E  + A
Sbjct: 217 YAPEMAYFECLHEMKLIVDLIYEGGIANMNYSISNNAEYGEYVTGVEVINSQSREAMRNA 276

Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
              +   E  +++ ++G     S  A   +T  H +++VG+  +R MM W   ++L+D D
Sbjct: 277 LKRIQTGEYAKMFIQEGASNYPSMTARRRLTADHQIEQVGA-KLRGMMPWIAKNKLVDLD 335


>gi|14521127|ref|NP_126602.1| isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|11135009|sp|Q9V072|SYI_PYRAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5458344|emb|CAB49833.1| ileS isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 1067

 Score = 37.0 bits (84), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 14/116 (12%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ I    VV+  G D+ RF MLW  N  E L F +  V++  +   + +  Y 
Sbjct: 625 KMSKSLGNIIRPEEVVERAGRDTFRFYMLWATNPWENLKFSWKGVEQVRRMLNILWNVYV 684

Query: 458 YARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            A            +  LD FD  PR + P E  F   +  ++  +      +EN 
Sbjct: 685 LAST----------YMSLDNFD--PRKLNPDELPFREEDKWILSRVNSLISEVENG 728


>gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 757

 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 8/133 (6%)

Query: 347 RGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           R F N + V G D    +V R+        + +   +VL+  LVR   D    KMSK  G
Sbjct: 471 RYFPNDVLVTGYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVR---DSQGRKMSKSLG 527

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I    V++  G+D++RF +    ++  LD  F + K +S  N   ++   +   R + 
Sbjct: 528 NGIDPMDVIENHGADALRFFLT-TNSTPGLDLRFDEKKMESSWN---FINKIWNAARYVQ 583

Query: 466 RQAKDIFPDLDFD 478
            Q  D  P LD D
Sbjct: 584 MQIGDTKPTLDVD 596


Searching..................................................done


Results from round 2




>gi|254780285|ref|YP_003064698.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039962|gb|ACT56758.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 586

 Score =  813 bits (2101), Expect = 0.0,   Method: Composition-based stats.
 Identities = 586/586 (100%), Positives = 586/586 (100%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD
Sbjct: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG
Sbjct: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS
Sbjct: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA
Sbjct: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ
Sbjct: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH
Sbjct: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD
Sbjct: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF
Sbjct: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR
Sbjct: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS
Sbjct: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586


>gi|315122845|ref|YP_004063334.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496247|gb|ADR52846.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 586

 Score =  719 bits (1857), Expect = 0.0,   Method: Composition-based stats.
 Identities = 464/586 (79%), Positives = 531/586 (90%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M+LF DFSSR+ NY+K+ID +  +EKK LD IV+ERPR+  HGHLSTNAAMILSRPL LD
Sbjct: 1   MHLFTDFSSRMINYIKDIDFEKNIEKKYLDCIVVERPRNIMHGHLSTNAAMILSRPLSLD 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+TIAELI+ARIK+DPDVD V I GKGFINLYLSPSYL KILS IVVSGIEYGR+LIGKG
Sbjct: 61  PITIAELIIARIKMDPDVDFVSIGGKGFINLYLSPSYLSKILSFIVVSGIEYGRSLIGKG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCRCAVVGD LA+LM FSGYEVTREYYINDAGAQI+TLA S
Sbjct: 121 RKVNVEYVSANPTGPMHVGHCRCAVVGDVLANLMEFSGYEVTREYYINDAGAQIDTLAHS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           VF RYQQ L NND DLPEG+YPG YLK +GKEL DKY SELLNF EEKWLPIV+DY+V+A
Sbjct: 181 VFLRYQQVLDNNDFDLPEGFYPGAYLKAIGKELVDKYGSELLNFYEEKWLPIVRDYAVKA 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+II+DDLKALNI+HD+F+SE +FHRGD SPIRDII ++ R+GY+YEG+LP PK+K  +
Sbjct: 241 MMEIIKDDLKALNIRHDVFVSEKNFHRGDHSPIRDIIGDMGRKGYIYEGVLPAPKAKKNK 300

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D++ +Q+LFRSTMVGDD+DRPL KSDGSYTYFAADLAYFK KYERGFD M+YVMGSDH
Sbjct: 301 TFDINCEQILFRSTMVGDDIDRPLFKSDGSYTYFAADLAYFKYKYERGFDQMVYVMGSDH 360

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKRLEAVA+AV+ +K+++NVLLCELVRLYRDGMPIKMSKRAGDFITLR+VVDEVG D
Sbjct: 361 SGYVKRLEAVASAVAGEKSKVNVLLCELVRLYRDGMPIKMSKRAGDFITLRYVVDEVGCD 420

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD FPD+DFDLF
Sbjct: 421 PVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDFFPDIDFDLF 480

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P+  + Q+  +D +ELQL++HL EYPR++ENATI QEPY+LAFYL+DLASVFH HWSHGR
Sbjct: 481 PQKALSQDFAWDIAELQLVMHLLEYPRIVENATIFQEPYRLAFYLHDLASVFHSHWSHGR 540

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           ENPRL+F+Q +NR+LT+MRLQLV+AVAS+INSGLNIIGVESP+EMS
Sbjct: 541 ENPRLKFIQEDNRELTIMRLQLVYAVASVINSGLNIIGVESPHEMS 586


>gi|227821928|ref|YP_002825898.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340927|gb|ACP25145.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 589

 Score =  701 bits (1810), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/586 (58%), Positives = 446/586 (76%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF SR+KN L+ +D   +    +   R+ IE PRD +HG ++TNAAM+L++ LG 
Sbjct: 4   MNLFTDFESRIKNILESLDIVREKRSDVDFGRVSIEPPRDPSHGDVATNAAMVLAKSLGT 63

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+LIV +++ DP+V  V +AG GFIN+ LS SY +K+LS++V +G ++GR+ +G 
Sbjct: 64  NPRALADLIVDKLRQDPEVAEVSVAGPGFINVRLSVSYWQKLLSAMVSAGTDFGRSTVGA 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+V +EYYINDAG+QI+ LA 
Sbjct: 124 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVAKEYYINDAGSQIDVLAR 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY+QAL     ++P G YPG YL  VG+ LAD++ + L   PE+KW+P+VK+  + 
Sbjct: 184 SAFLRYRQALGEEIGEIPAGLYPGDYLVPVGEALADEFGTSLRIMPEDKWMPLVKERVID 243

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY G LPPPK +  
Sbjct: 244 AMMAMIREDLAALNVNHDVFFSERTLHDNGAARIRTAINDLTFKGHVYIGTLPPPKGQLP 303

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 304 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFQEMIYVLGAD 362

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A+SE  A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 363 HGGYVKRLEALARAISEGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVGR 422

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ FPDLD   
Sbjct: 423 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCCSVFRQAKEAFPDLDLSS 482

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D +ELQL+  LAEYPRV+E A ++QEP+++AFYLYDLA+ FH  W+ G
Sbjct: 483 VDLAGAVIGAIVDPAELQLVAKLAEYPRVVEAAALSQEPHRIAFYLYDLAAAFHALWNKG 542

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +ENP LRFV   NR+L++ RL LVHAVAS++ SGL++ G  +P EM
Sbjct: 543 KENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSVTGTSAPEEM 588


>gi|222085780|ref|YP_002544310.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|254782936|sp|B9JEG3|SYR_AGRRK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221723228|gb|ACM26384.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 586

 Score =  697 bits (1799), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/586 (57%), Positives = 450/586 (76%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF  R+KN L++ID   +   ++   RI +E PRD +HG ++TNAAM+LS+PLG+
Sbjct: 1   MNLFTDFEVRIKNALEQIDIVREKRSELDFGRIGVEPPRDASHGDVATNAAMVLSKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE+I+A+++ D DV  V  AG GFIN+ LS  Y +++L++++  G ++GR+ +G 
Sbjct: 61  NPRALAEIIIAKLQEDADVADVSAAGPGFINIRLSVGYWQRLLATMISEGEKFGRSTVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+VT+EYYINDAG+QI+ LA 
Sbjct: 121 GQKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLGFAGYDVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA ++ ++L   PEE+WLPI+++ ++ 
Sbjct: 181 SVFIRYREALGEQVGEIPAGLYPGDYLVPVGESLAKEFGTKLRGMPEEQWLPIIRERAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL+ALN+ HD+F SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIRADLEALNVHHDVFFSERTLHANGAALIRTAINDLTFKGYVYKGALPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIY++G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFNEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VSE KA++ VLLC+LV+L+R+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARGVSEGKAKLTVLLCQLVKLFRNGEPVKMSKRSGDFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FPDLD   
Sbjct: 420 DSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPDLDIAS 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  +AE+PR+IE A  AQEP+++AFYLYDLAS FHGHW+ G
Sbjct: 480 LDLAKAVGGVISDPAELQLVAKIAEFPRIIEAAAQAQEPHRIAFYLYDLASSFHGHWNKG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV   NR+L++ RL LVHAVAS++ SGL I G  +P+EM
Sbjct: 540 KDLPELRFVNDKNRELSIARLGLVHAVASVLKSGLGITGTAAPDEM 585


>gi|116251801|ref|YP_767639.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256449|emb|CAK07533.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 585

 Score =  691 bits (1783), Expect = 0.0,   Method: Composition-based stats.
 Identities = 337/586 (57%), Positives = 447/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+S++ +G +YGR+ +G+
Sbjct: 61  NPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSTLGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE++W+PIVKD ++ 
Sbjct: 181 SVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIREDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDLD   
Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDLDVSP 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  LAE+PR++E A  +QEP+++AFYLYD+AS FH HW+ G
Sbjct: 480 ENL-AKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 539 KDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|325293096|ref|YP_004278960.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060949|gb|ADY64640.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 585

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 346/586 (59%), Positives = 456/586 (77%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+KN L+ +D   +  +K+   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AELIV  ++ D DVDSV +AG GFINL +S  Y +++L+ ++  GI++GR+ IG 
Sbjct: 61  NPRALAELIVPALQADGDVDSVNVAGPGFINLKVSVGYWQRLLAYMIGQGIDFGRSKIGT 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA 
Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL  +   +P G+YPG YL  VG+ LAD+Y  +L   PEEKWLPIVKD ++ 
Sbjct: 181 SVFLRYREALGEDIGAIPSGFYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL+ LN++HD+F SE   H G+  PI   I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMVMIREDLETLNVKHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVSE K+++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FP L    
Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPGLALSQ 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +        D +ELQL+  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G
Sbjct: 480 DDMS-SSVALISDINELQLVAKLAEYPRLIESAALAHEPHRLAFYLYDLASSFHGHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++  LRF+   NR+L++ RL LV+AVA+++ SGL ++G ++P+EM
Sbjct: 539 KDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584


>gi|86357446|ref|YP_469338.1| arginyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|109895025|sp|Q2K975|SYR_RHIEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86281548|gb|ABC90611.1| arginyl-tRNA synthetase (Arginine--tRNA ligase) protein [Rhizobium
           etli CFN 42]
          Length = 585

 Score =  688 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 342/586 (58%), Positives = 447/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+SI+ +GI+YGR+ +G+
Sbjct: 61  NPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASIIGAGIDYGRSSLGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GRTVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++ 
Sbjct: 181 SVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEEWMPIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMAMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFEEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ F  LD   
Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAKEAFAGLDVSP 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                     E D +ELQL+  LAE+PR+IE+A  +QEP+++AFYLYDLAS FH HW+ G
Sbjct: 480 EDLAKAVAGIE-DPAELQLVAKLAEFPRIIESAAQSQEPHRIAFYLYDLASAFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV   NR+ T+ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 539 KDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|15889018|ref|NP_354699.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|23822194|sp|Q8UEP4|SYR_AGRT5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15156807|gb|AAK87484.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 585

 Score =  688 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/586 (57%), Positives = 451/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+KN L+ +D   +  +K+   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AEL+V  ++ D DVD V +AG GFINL +S  Y +++L+ ++  G+++GR+ +G 
Sbjct: 61  NPRALAELLVPALQADGDVDGVNVAGPGFINLKVSVGYWQRLLADMIGQGVDFGRSTVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA 
Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL  +   +P G YPG YL  VG+ LAD+Y  +L   PEEKWLPIVKD ++ 
Sbjct: 181 SVFLRYREALGEDIGSIPSGLYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN++HD+F SE   H G+  PI   I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMVMIREDLALLNVRHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVSE K+++ VLLC+LV+L+RDG P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLFRDGEPVKMSKRSGDFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC+SIFRQA++ FP L    
Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCKSIFRQAQEAFPGLAPSA 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  LAEYPR+IE+A ++ EP++LAFYLYDLA  FHGHW+ G
Sbjct: 480 EDMAA-SVALISDINELQLVAKLAEYPRLIESAALSHEPHRLAFYLYDLAGSFHGHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++  LRF+   NR+L++ RL LV+AVA+++ SGL ++G ++P+EM
Sbjct: 539 KDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584


>gi|327191799|gb|EGE58799.1| arginyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 585

 Score =  688 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/586 (58%), Positives = 443/586 (75%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A++K D DV  V +AG GFIN+ LS  Y +++L+S++ SG +YGR+ +G 
Sbjct: 61  NPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMIASGTDYGRSTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++ 
Sbjct: 181 SVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTIS 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L    
Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLAVSA 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  LAE+PRV+E A  +QEP+++AFYLYDLAS FH HW+ G
Sbjct: 480 EDL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++   LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 539 KDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|190891507|ref|YP_001978049.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692531|sp|B3PXT5|SYR_RHIE6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190696786|gb|ACE90871.1| arginyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 585

 Score =  688 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/586 (58%), Positives = 443/586 (75%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A++K D DV  V +AG GFIN+ LS  Y +++L+S++ SG +YGR+ +G 
Sbjct: 61  NPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++ 
Sbjct: 181 SVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTIS 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VS  KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L+   
Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLEVSA 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  LAE+PRV+E A  +QEP+++AFYLYDLAS FH HW+ G
Sbjct: 480 EDL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++   LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 539 KDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|15965276|ref|NP_385629.1| arginyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307309299|ref|ZP_07588967.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|23822199|sp|Q92Q31|SYR_RHIME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15074456|emb|CAC46102.1| Probable arginyl-tRNA synthetase (arginine--tRNA ligase)
           [Sinorhizobium meliloti 1021]
 gi|306900300|gb|EFN30917.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 585

 Score =  688 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/586 (58%), Positives = 450/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+   L+ I+  + K  +    RI +E PRD +HG ++TNAAM+L++PLG+
Sbjct: 1   MNLFTDFEARINRILESIEIIREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+LIV ++  DP+V  V +AG GFIN+ LS SY +K+L++I  +G++YGR+  G 
Sbjct: 61  NPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI  LA 
Sbjct: 121 GRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY+QAL  + +++P G YPG YL  VG+ LAD+Y + L   PE+KW+P+VK+  + 
Sbjct: 181 SAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A+S   A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD   
Sbjct: 420 DPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLSS 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D +E+QL+  LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ G
Sbjct: 480 VDFAAA-AGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +ENP LRFV   NR+L++ RL LVHAVAS++ SGL+I G  +P+EM
Sbjct: 539 KENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584


>gi|222148975|ref|YP_002549932.1| arginyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254782937|sp|B9JXE6|SYR_AGRVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221735961|gb|ACM36924.1| arginyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 585

 Score =  688 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 342/586 (58%), Positives = 443/586 (75%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFADF +R+K  L+ +D  K K  +   DRIV+E PRD +HG  +TNAAM+L++PLG+
Sbjct: 1   MNLFADFENRIKTALETLDLVKEKRSELSFDRIVVEPPRDASHGDAATNAAMVLAKPLGV 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A+LI  ++K D D+  V +AG GF+N+ LS +Y +++L++++  G ++GR+  G 
Sbjct: 61  SPRVLADLIGEKLKEDADIAEVSVAGPGFLNIRLSVAYWQRLLANVIAGGTDFGRSQTGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY VT+EYYINDAG+QI+ LA 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVTKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA +Y   L N PEE+W+ IVKD ++ 
Sbjct: 181 SVFLRYREALGEAVGEIPAGLYPGDYLIPVGEALAQEYGVRLHNMPEEQWMEIVKDRAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY G LPPPK +  
Sbjct: 241 AMMVMIREDLAALNVHHDLFYSERQLHANGAAAIRTAINDLTFKGHVYRGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK KY+RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKYDRGFDRMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVSE KA++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVAKAVSEGKAKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ F D+D   
Sbjct: 420 DSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAREAFGDIDLSP 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       + SE+QLI  LAEYPR+IE +  + EP+++AFYLYDLAS FH HW+ G
Sbjct: 480 DVLEAAVT-GITEPSEVQLIAKLAEYPRIIEASAQSMEPHRIAFYLYDLASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV   NR+ ++ RL LVHAVAS++ SGL I G ++P EM
Sbjct: 539 KDQPELRFVNDKNRQSSLARLGLVHAVASVLQSGLAITGTDAPQEM 584


>gi|209549083|ref|YP_002281000.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238065092|sp|B5ZMF2|SYR_RHILW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|209534839|gb|ACI54774.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 585

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 338/586 (57%), Positives = 447/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A+++ D DV  V +AG GFIN+ L+  Y +++L++++ +G +YGR+ +G+
Sbjct: 61  NPRALADIIIAKLREDADVADVSVAGPGFINIRLAVGYWQRLLAAMIGAGTDYGRSTLGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE++W+PIVKD ++ 
Sbjct: 181 SVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL +LN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIREDLASLNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVGS
Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGS 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DLD   
Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFGDLDVS- 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  LAE+PR++E A  +QEP++LAFYLYDLAS FH HW+ G
Sbjct: 479 PEEFAQTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRLAFYLYDLASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV   NR+ T+ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 539 KDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|307317040|ref|ZP_07596481.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897128|gb|EFN27873.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 585

 Score =  687 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/586 (58%), Positives = 451/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+   L+ I+  + K  +    RI +E PRD +HG ++TNAAM+L++PLG+
Sbjct: 1   MNLFTDFEARINRILESIEIIREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+LIV ++  DP+V  V +AG GFIN+ LS SY +K+L++I  +G++YGR+  G 
Sbjct: 61  NPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI  LA 
Sbjct: 121 GRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY+QAL  + +++P G YPG YL  VG+ LAD+Y + L   PE+KW+P+VK+  + 
Sbjct: 181 SAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           ++ + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 EEWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A+S   A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD   
Sbjct: 420 DPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLSS 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D +E+QL+  LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ G
Sbjct: 480 VDFAAA-AGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +ENP LRFV   NR+L++ RL LVHAVAS++ SGL+I G  +P+EM
Sbjct: 539 KENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584


>gi|241204410|ref|YP_002975506.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858300|gb|ACS55967.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 585

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 336/586 (57%), Positives = 444/586 (75%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF SR+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++ LG 
Sbjct: 1   MNLFTDFESRIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKVLGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+ ++K D DV  V +AG GFIN+ L+  Y +++L+S++ +G +YGR+ +GK
Sbjct: 61  NPRALADVIITKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSSLGK 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE++W+PIVKD ++ 
Sbjct: 181 SVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL ALN+ HD+F SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIRDDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA  VS+ +A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVARGVSDGQAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DLD   
Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFADLDVSP 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +ELQL+  LAE+PR++E A  +QEP+++AFYLYD+AS FH HW+ G
Sbjct: 480 ENL-AKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 539 KDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584


>gi|150396377|ref|YP_001326844.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166232845|sp|A6U8M9|SYR_SINMW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150027892|gb|ABR60009.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 585

 Score =  683 bits (1763), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/586 (58%), Positives = 448/586 (76%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+   L+ ID  + K  +    RI +E PRD +HG ++TNAAM+L++PLG+
Sbjct: 1   MNLFTDFEARINRILESIDVIREKRSELDFRRINVEPPRDASHGDVATNAAMVLAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+LI  ++  DP+V  V +AG GFIN+ LS SY +K+L+ I  +G++YGR+ +G 
Sbjct: 61  NPRALADLIGDKLAQDPEVAEVSVAGPGFINVRLSVSYWQKLLAVITRAGVDYGRSALGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AFSG++VT+EYYINDAG+QI  LA 
Sbjct: 121 GRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFSGFDVTKEYYINDAGSQIEVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY+QAL  +  ++P G YPG YL   G+ LAD+Y + L   PE+KW+P+VK+  + 
Sbjct: 181 SAFLRYRQALGEDIGEIPAGLYPGDYLVPAGEALADEYGTSLRIMPEDKWMPLVKERVID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H    + IR  I++L  +G+VY+G+LPPPK +  
Sbjct: 241 AMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGMLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A+S   A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 360 HGGYVKRLEALARAISGGSAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD   
Sbjct: 420 DPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLSS 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D +E+QL+  LAEYPRV+E A  + EP+++AFYLYDLA+VFHGHW+ G
Sbjct: 480 IDLAGA-AGAIADPTEMQLVAKLAEYPRVVEAAAFSHEPHRIAFYLYDLAAVFHGHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +ENP LRFV   NR+L++ RL LVHAVAS++ SGL+I G  +P+EM
Sbjct: 539 KENPALRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584


>gi|163759455|ref|ZP_02166540.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283052|gb|EDQ33338.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 586

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/586 (55%), Positives = 434/586 (74%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F DF  R+K  ++ +D  + K E     R+ +E PRD AH  +STNAAM+L++PLG+
Sbjct: 1   MNVFKDFEERIKTAVQALDAVREKGEAVDFARLAVEPPRDPAHDDISTNAAMVLAKPLGV 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I A+   D DV    +AG GF+N  L+P++ +++++ ++  G+++GR+ +G 
Sbjct: 61  NPRALAEQIAAQFSGDADVAETSVAGPGFLNFRLTPTFWQRLVADVIGKGVDFGRSNLGD 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+G++VT+EYY+NDAG+QI+ LA 
Sbjct: 121 GLKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFTGFDVTKEYYVNDAGSQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY++AL  +  ++P G YPG YL  VG+ LA  +   L N PEE+WL I+KD ++ 
Sbjct: 181 SVFLRYREALGEDIGEIPPGLYPGDYLVPVGQALAADFGPRLHNMPEEEWLGILKDRAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  LN+ HD+F SE   H G  + IR  I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMVMIRDDLATLNVHHDVFFSERSLHAGSAAKIRTAINDLTFKGHVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF  MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSYTYFAADVAYFKDKFDRGFSEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAV  AVSE K ++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEAVNRAVSEGKTKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGC 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC S+ RQA ++FPDLD   
Sbjct: 420 DSVRFMMLYRKSSESLDFDFAKVTEQSKDNPVFYVQYAHARCASVMRQALEVFPDLDISP 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         SE+ LI  L EYPR++E A   QEP+++AFYLYDLAS+ H HW+ G
Sbjct: 480 EALGAADLSELSHESEVALIAKLGEYPRMLEAAASGQEPHRVAFYLYDLASMLHAHWNKG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R+ P LRFV   NR  T+ RL LV+AVAS++ SGL+I G ++P EM
Sbjct: 540 RDEPGLRFVNDKNRHSTVARLGLVYAVASVLKSGLSITGTDAPEEM 585


>gi|239831756|ref|ZP_04680085.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824023|gb|EEQ95591.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 603

 Score =  675 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/586 (56%), Positives = 431/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 19  MNIFADFDARIKKTLQDIDLKPKDGSELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 78

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +  D DV++V +AG GFINL L  SY ++ L++++  G ++GR+ +G 
Sbjct: 79  NPRELASRIAEALASDEDVETVDVAGPGFINLRLKASYWQRELAAMLNEGTDFGRSKLGS 138

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           GTKVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 139 GTKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 198

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ + LL  PE + L +VKD ++ 
Sbjct: 199 SVMVRYREALGEDIGEIPSGLYPGDYLVPVGQELAKEFGTRLLEMPEAEALALVKDRTID 258

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 259 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 318

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 319 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 377

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKRAG+FITLR VVDEVG 
Sbjct: 378 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRAGEFITLRDVVDEVGR 437

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D     D D 
Sbjct: 438 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 497

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D SE+ L+  LAEYPR+IE A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 498 VGMAA-NFGKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQWNRG 556

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 557 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 602


>gi|114707222|ref|ZP_01440120.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537418|gb|EAU40544.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 582

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/585 (53%), Positives = 416/585 (71%), Gaps = 4/585 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +FADF  R++  +  +   I      L+R+ +E PRD AHG L++NAAM+L++P+GL 
Sbjct: 1   MNMFADFEMRVRAAVSTVLTDIGHAVPDLERVTVEPPRDPAHGDLASNAAMVLAKPMGLK 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  ++  D D+ SV IAG GFIN+ L+P++  + L  ++ + ++YGR     G
Sbjct: 61  PRDLAEKIAEKLGADEDIASVEIAGPGFINMRLAPAFWPRHLREMLNARLDYGRGAPT-G 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+N+E+VSANPTGPMHVGHCR AVVGD LA L+AFSG EVT+EYY+NDAG QI  LA S
Sbjct: 120 RKINVEYVSANPTGPMHVGHCRGAVVGDALARLLAFSGEEVTKEYYVNDAGEQIGVLARS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL      +PEG YPG YLK +G+ LAD++   L + P+ +W PIV+D +++A
Sbjct: 180 AFLRYREALGEKIGMIPEGLYPGDYLKPLGRSLADEFGDSLRDKPQAEWEPIVRDRAIEA 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR+DLK L I+H++F SE   H  D   I + I NL  +GYVY G LPPPK K  +
Sbjct: 240 MMDMIREDLKTLGIEHEVFFSERTLHDADGGKIANAIANLEEKGYVYRGALPPPKGKPQE 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q L RST VGDD DRPL+KS+G YTYFAAD+AYF+ KYERGF  MI+V+G+DH
Sbjct: 300 DWE-DREQTLLRSTAVGDDQDRPLVKSNGLYTYFAADVAYFRDKYERGFSEMIFVLGADH 358

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKRLEAVA A+S   A+   +LC+LV+LYRDG P+KMSKR+GDF+TL  VV+EVG D
Sbjct: 359 SGYVKRLEAVAKAISGGTAKATAILCQLVKLYRDGAPVKMSKRSGDFVTLAEVVEEVGRD 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRFMML+RK+   LDFDF KV EQSK+NPVFYVQYA+AR  SIFRQA++     D  + 
Sbjct: 419 PVRFMMLYRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARAHSIFRQARETG--FDVSIG 476

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      D  E  LI  LAE+PRV+++A  A+EP++LAFYLYDLAS FH  ++ G+
Sbjct: 477 APIEADLNLLRDEGETGLIAKLAEFPRVVQSAANAREPHRLAFYLYDLASAFHAQYNRGK 536

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + P+LRFV  +  + ++ RL LV AVA+++ SGL+IIG ++P EM
Sbjct: 537 DLPQLRFVNPSAPESSLARLALVDAVATVVRSGLDIIGAQAPEEM 581


>gi|254704184|ref|ZP_05166012.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754853|ref|ZP_05998562.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261744606|gb|EEY32532.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 585

 Score =  673 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|23501763|ref|NP_697890.1| arginyl-tRNA synthetase [Brucella suis 1330]
 gi|161618837|ref|YP_001592724.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225627365|ref|ZP_03785402.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701641|ref|ZP_05163469.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706913|ref|ZP_05168741.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709979|ref|ZP_05171790.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713979|ref|ZP_05175790.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716962|ref|ZP_05178773.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031472|ref|ZP_05445086.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159598|ref|ZP_05457360.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254878|ref|ZP_05460414.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256369305|ref|YP_003106813.1| arginyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168606|ref|ZP_05755417.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566566|ref|ZP_05837036.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218767|ref|ZP_05933048.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261222062|ref|ZP_05936343.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314377|ref|ZP_05953574.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317527|ref|ZP_05956724.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321734|ref|ZP_05960931.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261752194|ref|ZP_05995903.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261758080|ref|ZP_06001789.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988562|ref|ZP_06101119.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998027|ref|ZP_06110584.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852229|ref|ZP_06792902.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|38258388|sp|Q8G146|SYR_BRUSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083524|sp|A9MAQ0|SYR_BRUC2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|23347691|gb|AAN29805.1| arginyl-tRNA synthetase [Brucella suis 1330]
 gi|161335648|gb|ABX61953.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225617370|gb|EEH14415.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|255999465|gb|ACU47864.1| arginyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260156084|gb|EEW91164.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260920646|gb|EEX87299.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923856|gb|EEX90424.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294424|gb|EEX97920.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296750|gb|EEY00247.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303403|gb|EEY06900.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738064|gb|EEY26060.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261741947|gb|EEY29873.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|262552495|gb|EEZ08485.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660759|gb|EEZ31020.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820818|gb|EFG37817.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 585

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|256060982|ref|ZP_05451140.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261324984|ref|ZP_05964181.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261300964|gb|EEY04461.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 585

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPNLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|306840369|ref|ZP_07473136.1| arginyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289654|gb|EFM60854.1| arginyl-tRNA synthetase [Brucella sp. BO2]
          Length = 585

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ LA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPESEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|163843148|ref|YP_001627552.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|189083525|sp|B0CLK2|SYR_BRUSI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163673871|gb|ABY37982.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 585

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMLLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|225852389|ref|YP_002732622.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264113|ref|ZP_05466645.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|254782946|sp|C0RIL0|SYR_BRUMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225640754|gb|ACO00668.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094331|gb|EEZ18176.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408895|gb|ADZ65960.1| arginyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538613|gb|ADZ86828.1| arginyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 585

 Score =  672 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|307946867|ref|ZP_07662202.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770531|gb|EFO29757.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 589

 Score =  672 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/589 (53%), Positives = 424/589 (71%), Gaps = 5/589 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +FS R+K+ LK +D + K      L R+ +E PRD AHG L+TNAAM+LS+ +G+
Sbjct: 1   MNIFTEFSERVKDMLKGLDLQTKDGAAPDLSRVTVESPRDPAHGDLATNAAMVLSKQVGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +   +K DPDV  V +AG GFIN+ L+ S  +K+L S++  G ++GR+  G 
Sbjct: 61  KPRDLAEKLAEALKNDPDVQDVDVAGPGFINMRLAHSVWQKVLKSVLEQGQDFGRSDFGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGH R AVVGD LA+L+AF+GY+VTREYYINDAG+QI+TLA 
Sbjct: 121 GKKTNVEYVSANPTGPMHVGHTRGAVVGDVLANLLAFAGYDVTREYYINDAGSQIDTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +  ++P G YPG YLK VG++LA  Y   L + PEE+WLP+VK  S+ 
Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLAADYKESLKDKPEEEWLPVVKGLSIS 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            MM +IR+DL +LN+ HD+F SE   H    G+ S I +++D L  +  VY+G LPPPK 
Sbjct: 241 MMMDMIREDLASLNVHHDVFFSERTLHSRGEGNVSKIDEMLDALRNRDLVYQGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +     + DR+Q LFR++  GDD DR L KSDGSYTYFAAD+AYF+ K++R F  MIYV+
Sbjct: 301 QVPDDWE-DREQTLFRASDYGDDTDRALKKSDGSYTYFAADVAYFRDKFQRDFKEMIYVL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DHSGY KRL+AV  AVS+ +A++ V  C+LV+L+R G P KMSKR+GDFITLR VVDE
Sbjct: 360 GADHSGYAKRLQAVGKAVSDSQAEVVVRFCQLVKLFRGGEPFKMSKRSGDFITLRDVVDE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQY +ARCRS+ RQA +    + 
Sbjct: 420 VGRDPVRFMMLYRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCRSVMRQAAEELSGVA 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D          +  D+ EL+L+  +A +P+++E A    EP+++AFYL+DLAS  HGHW
Sbjct: 480 IDDKALAEADFSALTDSGELELLAKMAVWPKIVEAAAETHEPHRIAFYLHDLASSLHGHW 539

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G+E P+LRF+ A++ KLT+ RL +V AV+S+I SGL+++GV++P EM
Sbjct: 540 NRGKELPQLRFINADDTKLTVARLAMVRAVSSVIASGLSVLGVDAPEEM 588


>gi|254718981|ref|ZP_05180792.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983971|ref|ZP_06096706.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837329|ref|ZP_07470210.1| arginyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|306843774|ref|ZP_07476372.1| arginyl-tRNA synthetase [Brucella sp. BO1]
 gi|264662563|gb|EEZ32824.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306275852|gb|EFM57568.1| arginyl-tRNA synthetase [Brucella sp. BO1]
 gi|306407581|gb|EFM63779.1| arginyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 585

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ LA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|153009679|ref|YP_001370894.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166232816|sp|A6X1G1|SYR_OCHA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151561567|gb|ABS15065.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 585

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K    + L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGDLDLSRIGVEPPRDSSHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +  D DV++V +AG GFINL L  +Y ++ LS+++  G ++GR+ +G 
Sbjct: 61  NPRELAGRIAEALASDADVETVDVAGPGFINLRLKATYWQRELSAMLNEGKDFGRSKLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G+KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GSKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  N  ++P G YPG YL  VG+ELA ++ S+LL  PE + L +VKD ++ 
Sbjct: 181 SVMLRYREALGENIGEIPSGLYPGDYLVPVGQELAKEFGSKLLEMPEAEALALVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKR+G+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRSGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D     D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +   D SE+ L+  LAEYPR+IE A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VGMAA-HFDKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|256113415|ref|ZP_05454264.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994813|ref|ZP_06107370.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765926|gb|EEZ11715.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 585

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV E SK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEPSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|148560686|ref|YP_001258851.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|166232762|sp|A5VQ54|SYR_BRUO2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148371943|gb|ABQ61922.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 585

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/586 (56%), Positives = 430/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + D +Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D
Sbjct: 301 GDWE-DCEQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P +MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPARMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|17987372|ref|NP_540006.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256044550|ref|ZP_05447454.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260563903|ref|ZP_05834389.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990976|ref|ZP_06103533.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|23822196|sp|Q8YGR9|SYR_BRUME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17983059|gb|AAL52270.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260153919|gb|EEW89011.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001760|gb|EEZ14335.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 585

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K  L++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+ GF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDHGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|118589112|ref|ZP_01546519.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118438441|gb|EAV45075.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 589

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/589 (52%), Positives = 416/589 (70%), Gaps = 5/589 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF+ R+K+ L+++D K    E   L R+V+E PRD AHG L+TNAAM+L++PLG+
Sbjct: 1   MNIFADFTQRVKDALQDLDLKDSNGESPDLSRVVVEAPRDPAHGDLATNAAMVLAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +VAR+  DP++    IAG GFINL ++ +   ++L+S++  GI +G      
Sbjct: 61  KPRDVAEQLVARLNADPEITETSIAGPGFINLRVAQTVWHRVLASVLAEGIRFGAQERSP 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+E+VSANPTGPMHVGH R AVVGD LA+++AF+G EV +EYYINDAG+QI+TLA 
Sbjct: 121 APKVNVEYVSANPTGPMHVGHIRGAVVGDALANILAFAGNEVVKEYYINDAGSQIDTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +  ++P G YPG YLK VG++L  ++ S L +  E +WLP+VK+ ++ 
Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLKAEFGSSLADMEEREWLPLVKERAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           AM+++IR DL AL ++H++F SE   H    G+ S I  +++ L  +G +YEG LPPPK 
Sbjct: 241 AMLELIRQDLAALGVEHEVFYSERTLHDRGEGNGSKIDHMLETLRNKGLIYEGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +     + DR+Q LFR++  GDD DR L KSDGSYTYFAAD+AYF+ K+ERGF   IYV+
Sbjct: 301 QVPDDWE-DREQTLFRASDFGDDTDRALKKSDGSYTYFAADVAYFQDKFERGFTETIYVL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY KRL+AV  A+S+ K ++ V  C+LV+L RDG P+KMSKR+GDFITLR VVDE
Sbjct: 360 GADHGGYAKRLQAVGKAISDGKTEVVVRFCQLVKLMRDGEPVKMSKRSGDFITLRDVVDE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA D   +  
Sbjct: 420 VGPDPVRFMMLFRKNDAPLDFDFKKVTEQSKDNPVFYVQYGHARCCSVLRQAADELKEAG 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           F +            D  E +L   +AE+P+V+E A    EP+++AFYL++LAS  HGHW
Sbjct: 480 FAVEDLARADFSLLDDVGEQELFAKMAEWPKVVEAAAETHEPHRIAFYLHELASSLHGHW 539

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G E P LRF+QA N KLT+ RL LV AV+ ++ SGL I+GV +P EM
Sbjct: 540 NKGYELPHLRFIQAGNLKLTLARLALVRAVSLVLASGLTILGVNAPEEM 588


>gi|110634164|ref|YP_674372.1| arginyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123353590|sp|Q11HB8|SYR_MESSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110285148|gb|ABG63207.1| arginyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 585

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/586 (54%), Positives = 424/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADFS R+ N +K ++ K K   ++ L R+ +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFSDRIINAVKALELKPKEGGELDLSRVAVEPPRDPSHGDIATNAAMVLSKAVGE 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E + A +  DPDV    +AG GF+NL L   +    L  +++   +YGR+ +G 
Sbjct: 61  NPRALGERLAAALAEDPDVAEASVAGPGFVNLRLGNGFWHARLGEMLLLAGDYGRSKMGN 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD L++L+AF+GY+VTREYYINDAGAQI+ L  
Sbjct: 121 GHKVNVEYVSANPTGPMHVGHCRGAVVGDALSNLLAFAGYDVTREYYINDAGAQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +   +PEG YPG YLK VGK LAD+Y ++LL  P E+ L I KD ++ 
Sbjct: 181 SVLMRYREALGEDIGQIPEGLYPGDYLKPVGKALADEYGTKLLERPAEEALKIAKDTAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HD+F SE   H G+   IR  I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIREDLAALNVHHDVFFSERSLHAGNGGTIRSAINDLTLKGHVYKGKLPPPKGQVL 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDG++TYFAAD+AY K KY RGF+++IYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTDVGDDIDRPLIKSDGTFTYFAADVAYMKDKYSRGFEHLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A+SE K  + VLLC+LV+L+R+G P++MSKRAG+F+TLR V+DEVG 
Sbjct: 360 HGGYVKRLEALARAISEGKLHLTVLLCQLVKLFRNGEPVRMSKRAGEFVTLRDVIDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RK+   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +      FD 
Sbjct: 420 DAVRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLNVRKFDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D  E+ LI  LAEYPR+IE+A  A EP++LAFYLY+LA+ FH  W+ G
Sbjct: 480 EAMKAALH-RLDDPGEIALIRKLAEYPRLIESAAQALEPHRLAFYLYELANQFHVQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            E  RLRFV+ N+ +LT  RL LV AV  ++ SGL ++G ++P EM
Sbjct: 539 SETDRLRFVKVNDPELTHARLGLVQAVCDVVRSGLALVGADAPEEM 584


>gi|62289822|ref|YP_221615.1| arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699747|ref|YP_414321.1| arginyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024063|ref|YP_001934831.1| arginyl-tRNA synthetase [Brucella abortus S19]
 gi|237815307|ref|ZP_04594305.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689127|ref|ZP_05152381.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693610|ref|ZP_05155438.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254697260|ref|ZP_05159088.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730159|ref|ZP_05188737.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257376|ref|ZP_05462912.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545431|ref|ZP_05821172.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260754626|ref|ZP_05866974.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757849|ref|ZP_05870197.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761672|ref|ZP_05874015.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883653|ref|ZP_05895267.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213876|ref|ZP_05928157.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297248226|ref|ZP_06931944.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|75496922|sp|Q57DN0|SYR_BRUAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109894975|sp|Q2YNJ9|SYR_BRUA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689361|sp|B2S5B0|SYR_BRUA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|62195954|gb|AAX74254.1| ArgS, arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615848|emb|CAJ10852.1| Arginyl-tRNA synthetase, class Ic:Aminoacyl-tRNA synthetase, class
           I:Arginyl tRNA synthetase N-terminal domain [Brucella
           melitensis biovar Abortus 2308]
 gi|189019635|gb|ACD72357.1| arginyl-tRNA synthetase [Brucella abortus S19]
 gi|237790144|gb|EEP64354.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096838|gb|EEW80713.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668167|gb|EEX55107.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672104|gb|EEX58925.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674734|gb|EEX61555.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873181|gb|EEX80250.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915483|gb|EEX82344.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297175395|gb|EFH34742.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 585

 Score =  668 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/586 (56%), Positives = 431/586 (73%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF +R+K   ++ID K K   ++ L RI +E PRD +HG ++TNAAM+LS+ +G 
Sbjct: 1   MNIFADFDARIKKTFQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  I   +K D DV+SV +AG GFINL L  SY ++ L  ++  G ++GR+ +G 
Sbjct: 61  NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA 
Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL  +  ++P G YPG YL  VG+ELA ++ ++LL  PE + L IVKD ++ 
Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALN+ HD+F SE   H      IR+ I++L  +G+VY+G LPPPK +  
Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGRLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+ YFK KY+RGF+ MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVTYFKDKYDRGFNEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG 
Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D    +D D 
Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D SE+ L+  LAEYPR+IE+A I QEP++LAFYLYDLAS FH  W+ G
Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ENP LRF++ N+  L++ RL LV  V+ ++ SGL IIG ++P EM
Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584


>gi|158424430|ref|YP_001525722.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047969|sp|A8I9L7|SYR_AZOC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158331319|dbj|BAF88804.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 586

 Score =  665 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/586 (51%), Positives = 411/586 (70%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M ++A F+  ++  +  +  ++     + L RIV+E PRD AHG L+TNAAM+L++ L +
Sbjct: 1   MNVYAIFADHVREAVAALAGELPEAGALDLSRIVVEPPRDAAHGDLATNAAMVLAKDLKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I AR+   P+V  V +AG GFINL L   Y   +L++++ +G ++GR+ +G 
Sbjct: 61  KPRDLAEKIAARLAQVPNVAKVDVAGPGFINLTLDAGYWPGVLAALLRAGTDFGRSDLGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGHCR AV GD LASL+AF+G++VTREYYINDAGAQ++ LA 
Sbjct: 121 GEAVNVEYVSANPTGPMHVGHCRGAVFGDALASLLAFAGFKVTREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A      ++P+G YPG YL  VGK LA+ + SE L  PE +WLPI + +++ 
Sbjct: 181 SAYLRYREAATGETVEIPDGLYPGDYLVPVGKTLAEVHGSEYLESPESEWLPIFRTFAIG 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IRDDL+AL I  D+F SE          +   I+ L R G VYEG LPPPK    
Sbjct: 241 AMMEMIRDDLQALGISFDVFFSERSLTAAGIDRVGLTIEQLRRTGEVYEGRLPPPKGAPI 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST  GDDVDRPL+KSDGSYTYFA D+AY K K++RGF  MI V G+D
Sbjct: 301 EDWE-DREQSLFRSTAHGDDVDRPLVKSDGSYTYFAGDIAYHKDKFDRGFRRMIDVWGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AV+  +A ++V LC+LVRL R+G  ++MSKRAG F+TLR VVDEVG 
Sbjct: 360 HGGYVKRMQAAVKAVTAGQATLDVELCQLVRLLRNGEQVRMSKRAGSFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN   LDFD  KV EQS+ENPVFYVQYA+AR +SI R AK+   DL    
Sbjct: 420 DAVRFMMLFRKNDATLDFDLAKVIEQSRENPVFYVQYAHARAQSILRNAKEQHADLPESG 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P +   D  EL L+  LA +PR++E A  A+EP+++AFYL+++AS FHG W+ G
Sbjct: 480 AIYAHAPLDRLTDEGELGLVKRLAGWPRLVEQAAHAREPHRVAFYLHEVASEFHGQWNRG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRF+  N+R+LTM RL LVH VA+++ SGL ++GVE+ +EM
Sbjct: 540 KDLPHLRFIIENDRELTMARLALVHGVAAVLASGLGLLGVEAVDEM 585


>gi|298291873|ref|YP_003693812.1| arginyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928384|gb|ADH89193.1| arginyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 588

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/589 (53%), Positives = 411/589 (69%), Gaps = 6/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA F+  +++ + ++  +  V   I   R+V+E PRD +HG L+TNAAM+L++  G+
Sbjct: 1   MNLFAIFADHVRDAVAQLATEGAVPAGIDTTRVVVEPPRDASHGDLATNAAMVLAKDAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A+ + A++   P V  V +AG GFIN+ L  SY  +IL++++ +G +YGR   G 
Sbjct: 61  KPRELADKLTAKLAALPGVAKVDVAGPGFINIALDGSYWPRILAAVLNAGRDYGRTDAGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGPMHVGHCR AV GD LA+L+AF+G++VTREYYINDAGAQ++ LA 
Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVFGDALANLLAFAGWKVTREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL    S +PEG YPG YL  VGK L  KY   +L+  E +WLP V+  ++ 
Sbjct: 181 SAFLRYREALGETIS-IPEGLYPGDYLVPVGKALVAKYGRTMLDRSEAEWLPAVRKAAID 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           AMM +IRDDL ALNI HD+F SE   H    G PS I  ++D L  +  VYEG LPPPK 
Sbjct: 240 AMMAMIRDDLAALNIHHDVFFSERTLHARPDGQPSIIDRLLDELRARNLVYEGRLPPPKG 299

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  + DR+Q LFR+T  GDDVDRPL+KSDG+YTYFAAD+AY K KY+RGF  MI V 
Sbjct: 300 QPIEDWE-DREQTLFRATDFGDDVDRPLMKSDGAYTYFAADIAYHKDKYDRGFKRMIDVW 358

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYVKR++A   A S  +A ++V LC+LVRL R G P+KMSKRAGDF+TLR VVDE
Sbjct: 359 GADHGGYVKRMQAAVKAASGGEASLDVELCQLVRLLRAGEPVKMSKRAGDFVTLREVVDE 418

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+VRFMM+ RKN  +LDFD  KV EQS++NPVFYVQYA+AR  SI R AK+ F DL 
Sbjct: 419 VGRDAVRFMMINRKNDAVLDFDLAKVIEQSRDNPVFYVQYAHARASSILRNAKEAFTDLP 478

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            +             D  E+ LI  +A YPR++E A  A+EP++LAFYLYDLAS  H  W
Sbjct: 479 AEAAAFASAELTLLEDEGEIALIKLIASYPRIVEQAAAAREPHRLAFYLYDLASALHAQW 538

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G++ P LRF+  ++RK T  RL LVHAVA II SGL+I+GV +P EM
Sbjct: 539 NRGKDLPHLRFIIEDDRKSTYARLALVHAVALIIASGLSILGVGAPEEM 587


>gi|319783184|ref|YP_004142660.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169072|gb|ADV12610.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 585

 Score =  663 bits (1711), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/586 (52%), Positives = 423/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF++R+   ++ +D K K      L RI +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MNIFADFTARIIKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +   ++ D DV +  +AG GF+NL L   + +  L++++  G  YGR+ +G 
Sbjct: 61  NPRALAERLAQALRDDKDVAATEVAGPGFVNLRLKDGFWQTHLTALLGEGRNYGRSTVGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG+QI+ L  
Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGSQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL ++  ++P G YPG YL  VG+ L  ++   LL  P+++ L IVKD ++ 
Sbjct: 181 SAFLRYREALGDDIGEIPAGLYPGDYLVPVGQALVAEFGRSLLQMPDDEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN+ HD+F SE   H  +   IR  I++L  +G++Y+G LPPPK +  
Sbjct: 241 AMMAMIREDLAMLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A++ ++ ++ VLLC LV+L+R+G P++MSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEALARAIAGEEVKLTVLLCNLVKLFREGEPVRMSKRSGDFVTLREVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +   + +FD 
Sbjct: 420 DAIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D  E+ LI  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G
Sbjct: 480 NSLASA-AALLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP LRFV+ N+R+LT  RL LV AV+ ++ SGL +IG  +P EM
Sbjct: 539 TDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584


>gi|209885394|ref|YP_002289251.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873590|gb|ACI93386.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 597

 Score =  660 bits (1702), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++FAD   R++   + +     + + I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HIFADILGRVQGVCRALIADGTLPEGIDLSRIVVEPPKDASHGDMATNAAMVLAKEAKTK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I A++  DP V SV +AG GFINL L        L +++ +G  YGR+ IG G
Sbjct: 69  PRDLADKIAAKLGADPQVASVSVAGPGFINLTLKNEAWFDALRAVLNTGAAYGRSEIGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+AF+GY+VT+EYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLAFAGYDVTKEYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++P+G YPG YLK VG+ LA +Y  +L+  PE +WLP+V++ ++  
Sbjct: 189 AFLRYREALGEAIGEIPDGLYPGDYLKPVGEALAKEYGDKLVKQPEAEWLPLVREKAIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G    +   I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIVGGTDQVGATIAGLRAKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSDGSYTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDGSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  +  ++V + +LVRL R G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTAGEGTLDVKIVQLVRLLRAGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-- 478
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  S+F+ A+   PDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARVTVPDLPEDNG 487

Query: 479 --LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             L      P E   D  EL LI  LA +PR +E A  A EP+++AFYLYDLAS FH  W
Sbjct: 488 KRLAFLAGAPVERLTDPVELSLIRQLALFPRTLEAAAAAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T+ RL LV  V S++ SGL ++GV +PNEM
Sbjct: 548 TKGRDAPHLRFIIENDAEMTVARLALVQGVVSVLASGLAVLGVHAPNEM 596


>gi|92117303|ref|YP_577032.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123265276|sp|Q1QMH5|SYR_NITHX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91800197|gb|ABE62572.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 597

 Score =  658 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/589 (51%), Positives = 405/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD  +R+      +  +  +   + L RIV+E PR+ +HG ++TNAAM+L++     
Sbjct: 9   HLFADVLARVHAVCSALVEEGALPAGLDLSRIVVEPPREASHGDMATNAAMVLAKGAKSK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE + A+++ D  +D   IAG GFINL L P      L +++  G  YGR+ IG G
Sbjct: 69  PRDLAEKVAAKLRADGLIDKAEIAGPGFINLTLKPQVWSDALRTVLREGDGYGRSAIGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYGVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + RY++AL  +  ++PEG YPG YLK VG+ LA ++   LL  PE +WLP+ +  ++  
Sbjct: 189 AYLRYREALGQDIGEIPEGLYPGDYLKPVGQALAAEHGDSLLKAPEAEWLPVARAKAIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++I+ DL ALNIQH++F SE     G    +   ID L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIKGDLAALNIQHEVFFSERSLIEGGSDRVAATIDFLRAKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDD+DRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDIDRPLKKSDGGYTYFASDIAYHKTKFDRGFLNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  KA ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTSGKATLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A++ FPDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREAFPDLPEDAS 487

Query: 481 PRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R         E   D +EL L+  LA YPR +E A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 KRAAFLAAAAVERLTDPAELGLLRRLALYPRTVEAAALAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+  +T  RL LV  V S++ SGL ++GV +PNEM
Sbjct: 548 TKGRDMPHLRFIINNDAVITRARLALVQGVVSVLASGLAVLGVHAPNEM 596


>gi|39935919|ref|NP_948195.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562421|sp|Q6N5W6|SYR_RHOPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|39649773|emb|CAE28295.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 597

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/589 (50%), Positives = 408/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+      +  +  +   I L R+V+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HLFARLLSRVHAVCAALIEEGALPAGIDLSRVVVEPPKDASHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ +  +D V IAG GFINL L P+   + L +++ +G  YGR+ +G G
Sbjct: 69  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK VG+ L  ++ + L + PE +WLP V+  ++  
Sbjct: 189 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEHGAALKDMPEAQWLPTVRATAIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+ I+ DL ALNI H++F SE     G  + + + I+ L  +G VY+G LPPPK    +
Sbjct: 249 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++ PDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 487

Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R       P E   D +EL+L+  LA YPR++E A  A EP+++AFYL +LAS FH  W
Sbjct: 488 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +HGR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 548 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 596


>gi|90419380|ref|ZP_01227290.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336317|gb|EAS50058.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 583

 Score =  657 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/586 (53%), Positives = 410/586 (69%), Gaps = 5/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +FADF SR+K  ++ +    +     L R+ +E PRD AHG L+TNAAM+L++PLGL 
Sbjct: 1   MNIFADFESRVKAAVEAVLSDSENGVPDLARVTVEPPRDAAHGDLATNAAMVLAKPLGLK 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I A +  DPDV++  IAG GFINL L   +    L+ I+ +G ++GR     G
Sbjct: 61  PRDLATRIAAHLARDPDVETAEIAGPGFINLKLRQPFWIAHLAGILAAGGDFGRAPAT-G 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +VN+E+VSANPTGPMHVGHCR AVVGD +ASLMAF G EVT EYYINDAG Q+N LA S
Sbjct: 120 RRVNVEYVSANPTGPMHVGHCRGAVVGDAVASLMAFGGDEVTTEYYINDAGEQVNVLARS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL     ++P G YPG YLK VG++LA ++   LL   E +WLP+V++ ++ A
Sbjct: 180 ALLRYREALGETIDEIPAGLYPGEYLKPVGEKLASEFGDRLLAMDEAEWLPLVRERAIDA 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR DLK L I+ D+F SE   H  +   I   I +L  +G+VY+G LPPPK +  +
Sbjct: 240 MMAMIRADLKLLGIEQDVFFSERTLHDDNGGKIAAAIADLRERGFVYQGSLPPPKGQLPE 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q L RST VGDD DRPL+KSDG YTYFAAD+AYF  K+ERGF  M+YV+G+DH
Sbjct: 300 DWE-DREQTLLRSTEVGDDQDRPLVKSDGRYTYFAADVAYFHDKFERGFQEMVYVLGADH 358

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRLEAVA AVS   A  +VLLC+LV+LYR+G P+ MSKR+G+F+TL  VV+EVG D
Sbjct: 359 GGYVKRLEAVARAVSGGTATADVLLCQLVKLYRNGEPVTMSKRSGNFVTLADVVEEVGRD 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDL 479
            VRFMML+RK+   LDFDF KV EQSK+NPVFYVQYA+AR  +IFRQA +    L DF  
Sbjct: 419 PVRFMMLFRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARSAAIFRQAVEAGLTLPDFAS 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R  +      D  E+ LI  LAE+PR+I++A  A+EP++LAFYLYDLAS FH  ++ G
Sbjct: 479 LDRETLNL--LNDEGEIGLIRKLAEFPRLIKSAADAKEPHRLAFYLYDLASSFHAQYNRG 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRFV A+  K+T  RL LV AVA ++ +GL +IGV++P EM
Sbjct: 537 KDLPELRFVNADEAKITFARLALVKAVALVLATGLGLIGVDAPEEM 582


>gi|260459783|ref|ZP_05808037.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034585|gb|EEW35842.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 585

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/586 (53%), Positives = 420/586 (71%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF++R+   ++ +D K K      L RI +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MNIFADFTARVIKAVEALDLKDKDGVSPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ +   ++ D DV +  +AG GF+NL L   + +  LS+++  G  YGR+ IG 
Sbjct: 61  NPRVLADRLALVLRDDVDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGEGRNYGRSTIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGHCR AVVGD LA++MAF+GY+VT+EY INDAG+QI+ L  
Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANIMAFAGYDVTKEYVINDAGSQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY +AL  +  ++P G YPG YL  VG+ L  ++   LL  P+++ L IVKD ++ 
Sbjct: 181 SAFLRYSEALGEDIGEIPPGLYPGDYLVPVGEGLVKEFGRSLLQMPDDEALAIVKDRTID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN+ HD+F SE   H  +   IR  I++L  +G++Y+G LPPPK +  
Sbjct: 241 AMMAMIREDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A++    ++ VLLC LV+L+RDG P++MSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEALARAIAGDDVKLTVLLCNLVKLFRDGEPVRMSKRSGDFVTLREVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D +RFMML+RKN   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +   + +FD 
Sbjct: 420 DPIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFDR 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V    S  D  E+ LI  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G
Sbjct: 480 NSL-VAAVTSLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP LRFV+ N+R+LT  RL LV AV+ ++ SGL +IG  +P EM
Sbjct: 539 TDNPDLRFVKVNDRELTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584


>gi|328543964|ref|YP_004304073.1| Arginyl-tRNA synthetase ArgS [polymorphum gilvum SL003B-26A1]
 gi|326413708|gb|ADZ70771.1| Arginyl-tRNA synthetase ArgS [Polymorphum gilvum SL003B-26A1]
          Length = 589

 Score =  656 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/589 (52%), Positives = 414/589 (70%), Gaps = 5/589 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F++R++  +  ++          L RI +E PRD AHG L+TNAAMIL++PLG+
Sbjct: 1   MNIFVEFTARVQAAVAGLEAVAAAGPDLDLSRITVESPRDPAHGDLATNAAMILAKPLGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I A +  D +V  V +AG GFINL ++P+   ++L + V  G ++GR+ +G 
Sbjct: 61  KPRDLAEQIAAALGRDDEVAEVSVAGPGFINLKVAPAVWERVLRAAVTEGSDFGRSRLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           GTKVN+E+VSANPTGPMHVGH R AV GD LA+L+A++GYEVTREYYINDAG+QI TLA 
Sbjct: 121 GTKVNVEYVSANPTGPMHVGHTRGAVFGDALANLLAYAGYEVTREYYINDAGSQIETLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +  ++P G YPG YLK VG  LA  +   LL+  E  WLPIVKD ++ 
Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGAALAAAHGQALLSMNEAGWLPIVKDAAIT 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            MM +IR DL+ LN+ HD+F SE   H    G PS I  ++D L  +G VYEG LPPPK 
Sbjct: 241 GMMDLIRADLELLNVHHDVFFSERTLHERSDGTPSQIDLMLDRLRSRGLVYEGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  + DR+Q LFR+T  GDD+DRPL KSDG+YTYFAAD+AYF  KY+RGF+ M+YV+
Sbjct: 301 QLPEDWE-DREQTLFRATDFGDDIDRPLKKSDGTYTYFAADVAYFLSKYQRGFEEMVYVL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYVKRLEAV  A+S  +A + V LC+LV+L+R G P++MSKR+GDFITLR VV+E
Sbjct: 360 GADHGGYVKRLEAVGKAISGGEATVIVRLCQLVKLFRAGEPVRMSKRSGDFITLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RKN   LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA +  PDLD
Sbjct: 420 VGRDPVRFMMLFRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCCSVLRQAGEELPDLD 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 +        D  EL LI  LA +P++++ A  A EP+++AF+L+DLAS  H HW
Sbjct: 480 LSDAALSAADLSHLRDVGELDLIAKLALWPKMVDAAAEAHEPHRIAFFLHDLASSLHAHW 539

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G+E P+LRF+   N   T+ RL LV AV+ ++ SGL ++GV++P EM
Sbjct: 540 NRGKEMPQLRFINTENTGSTLARLALVRAVSLVLASGLAVLGVDAPPEM 588


>gi|209964346|ref|YP_002297261.1| arginyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957812|gb|ACI98448.1| arginyl-tRNA synthetase ArgS [Rhodospirillum centenum SW]
          Length = 584

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/586 (46%), Positives = 389/586 (66%), Gaps = 4/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F DF +++K  L+E+     + + + L R+ +E PRD +HG +STNAAM+L++P G 
Sbjct: 1   MNVFKDFEAKIKAALEELMADGSLPQGLDLSRVTVEPPRDPSHGDVSTNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P +IAE +VAR++   DV +  +AG GF+NL ++P Y  + LS ++V+G+ YG + +G 
Sbjct: 61  PPRSIAEALVARLRSVADVTAAEVAGPGFVNLRMAPDYWCRRLSDVLVAGVTYGASTMGN 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G++VN+E+VSANPTGP+H  H R AVVGD LA+L+  +G+EVTREYYINDAGAQ+  L  
Sbjct: 121 GSRVNVEYVSANPTGPLHAAHARGAVVGDALAALLEKAGFEVTREYYINDAGAQVEVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A+   ++ +P G YPG YLK VG+ +A +     L  PE +WLP+++D++V 
Sbjct: 181 STYLRYREAVTGEEASIPAGLYPGEYLKEVGQAIARRDGDRWLTAPEAEWLPVMRDFAVG 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +M  I++DL ++NI HD+F SE    +     +   +  L  Q  +Y G+L PPK K  
Sbjct: 241 MIMGWIKEDLASMNIHHDVFTSERALVQ--SGAVDAALQTLRDQDLIYVGVLEPPKGKKP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF++T  GDDVDRPL KSDGS+TYFA D+AY   K  RG   +I V G+D
Sbjct: 299 DDWE-PRPQTLFKATQFGDDVDRPLQKSDGSWTYFANDIAYHYDKARRGSPTLIDVWGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR+EA   AV+     ++V +C+LV L  +G P+KMSKRAG F+TLR V++ VG 
Sbjct: 358 HGGYVKRMEAAVKAVTGGAGVLDVKICQLVHLLENGQPVKMSKRAGTFVTLRDVMEAVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF+ML R+N + L+FD+ KV EQSK+NPVFYVQYA+ARCRS+ R A++  PD D   
Sbjct: 418 DVVRFIMLTRRNDQTLEFDYAKVTEQSKDNPVFYVQYAHARCRSVLRHAEEAHPDWDITG 477

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +         E++LI  +  +PR IE A  A EP+++AFYLYDLAS FH  W+ G
Sbjct: 478 PALAGVDLARLSAPEEIELIRQMLSWPRQIEAAAEAHEPHRVAFYLYDLASAFHALWNKG 537

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++  LRF+  ++ +LT  RL LV AV+ +I SGL ++GV    EM
Sbjct: 538 KDDATLRFLIESDPELTKARLALVKAVSIVIASGLQVMGVVPVEEM 583


>gi|192291567|ref|YP_001992172.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192285316|gb|ACF01697.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 592

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/589 (50%), Positives = 407/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+      +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 4   HLFARLLSRVHAVCAALIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ +  +D V IAG GFINL L P+   + L +++ +G  YGR+ +G G
Sbjct: 64  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +GY VTREYYINDAGAQ++ LA S
Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYAVTREYYINDAGAQVDVLARS 183

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK VG+ L  +Y + L + PE +WLP V+  ++  
Sbjct: 184 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEYGAALNDMPEAQWLPTVRATAIAM 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+ I+ DL ALNI H++F SE     G  + + + I+ L  +G VY+G LPPPK    +
Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 422

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++ PDL  D  
Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482

Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R       P E   D +EL+L+  LA YPR++E A  A EP+++AFYL +LAS FH  W
Sbjct: 483 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +HGR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591


>gi|83953782|ref|ZP_00962503.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841727|gb|EAP80896.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 580

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/586 (46%), Positives = 389/586 (66%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  S + + L  +     + + +  D I +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP + +  +AG GF+NL LS +  + ++ +++  G ++GR  +G+
Sbjct: 61  KPRDIAEKLAEKLGEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   PEG YPG YL  VG  L DK     ++  E  WL  V++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALKDKVGDAYIDADESVWLEDVRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MMK+IRDDL +L ++ D+F SE   +      I   ID+L  +G +YEG+L PPK K  
Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAIDDLKAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K +RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+SE    +++ L +LV+L+++G   KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKEFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +   D D + 
Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVHSVLRKAAEAGVDTDMET 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R  + Q      +EL+L   LAE+PR++E A  + EP+++AFYLY+LA  FHG W+ G
Sbjct: 477 LQRADLSQ--LDHEAELKLAQKLAEWPRMVETAARSNEPHRIAFYLYELAGDFHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++  L+  ++ L  A A +I SGL I+GV+   EM
Sbjct: 535 NDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGILGVKPAEEM 579


>gi|254469368|ref|ZP_05082773.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961203|gb|EEA96398.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 584

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/585 (51%), Positives = 404/585 (69%), Gaps = 2/585 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +FADF+ R+ + +K +D      +  L R+ +E PRD AHG L+TNAAM+L++ L + 
Sbjct: 1   MNIFADFAERVNSVVKGLDLAADAPELDLRRVTVEPPRDAAHGDLATNAAMVLAKQLKMK 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I   ++ D +V++V +AG GFIN+ +S +   +++  +V  G ++G +  G G
Sbjct: 61  PRDLAEKIAEGLRADSEVEAVDVAGPGFINIRVSKTLWERVIGDVVAKGDKFGASARGDG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGH R AVVGD LASL+ F+GY+VTREY INDAG+QI+TLA S
Sbjct: 121 LKVNVEYVSANPTGPMHVGHTRGAVVGDALASLLQFAGYDVTREYVINDAGSQIDTLANS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +   +PEGYYPG YL  VGK LA++Y   L +    + L ++K Y+V  
Sbjct: 181 AFLRYREALGEDIGQIPEGYYPGEYLIPVGKSLAEEYGESLKDMAPAERLALLKGYTVDK 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR DL ALN++HD+F SE   H G  + I   +D L ++  VY G LPPPK +  +
Sbjct: 241 MMDMIRGDLGALNVKHDVFFSEKTMH-GQGNAIDLTLDALRKRDLVYNGTLPPPKGEVPE 299

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFRS+  GDD DR L+KSDGSYTYFAAD+AY + K ERGF  +I+V+G+DH
Sbjct: 300 DWE-DREQTLFRSSNYGDDSDRALVKSDGSYTYFAADVAYMRDKIERGFKEIIFVLGADH 358

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           +GYVKRLEA+  A+S     + V LC+LV+L++ G   KMSKR+G+FITLR VVDEVG D
Sbjct: 359 AGYVKRLEAIGNAISGGDVDVIVRLCQLVKLFKGGAEFKMSKRSGNFITLRDVVDEVGVD 418

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN   LDFDF KVKEQSK+NPVFYVQY +ARC S+ RQA +          
Sbjct: 419 AVRFMMLYRKNDAQLDFDFDKVKEQSKDNPVFYVQYGHARCHSVLRQAAEELDWFSNTAE 478

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      D  EL LI  +A++PR+++ A    EP+++AFYLY+LAS  HGHWS G+
Sbjct: 479 ELQSADFAQLEDEGELALIAKMAQWPRIVDGAAENHEPHRIAFYLYELASALHGHWSRGK 538

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           E P+LRF+     +LT  RL LV+AV+ +I SGLN++GV +PNEM
Sbjct: 539 EKPQLRFINDKTPELTKARLALVYAVSQVIASGLNVLGVTAPNEM 583


>gi|86749867|ref|YP_486363.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|109895027|sp|Q2IWF8|SYR_RHOP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86572895|gb|ABD07452.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 597

 Score =  653 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/589 (50%), Positives = 405/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   +R+      +  +  +     L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HLFAHILARVHAVCAALTDEGALPTGTDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  +++ +  +D+V IAG GFINL L P+   + L +++ +G  YGR+ +G  
Sbjct: 69  PRDLAEKIAEKLRAEDQIDTVSIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSRVGGA 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVNIE+VSANPTGPMHVGHCR AV GD LA+L+  +GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNIEYVSANPTGPMHVGHCRGAVFGDALANLLETAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +   +PEG YPG YL  VG  L  ++ + L   PE +WLP+V+  S+  
Sbjct: 189 AFLRYREALGEDIGAIPEGLYPGDYLVPVGTALVAEHGAALKELPEPQWLPMVRAKSIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++I+ DL AL I H++F SE     G+ + + D ID L  +G VY+G LPPPK    +
Sbjct: 249 MMEMIKADLAALAITHEVFFSERSLIEGERNRVADTIDFLRAKGDVYQGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDG+YTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGTYTYFASDIAYHKVKFDAGFGNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKR+GDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRMQAAITAVTSGKGALDVKIVQLVRLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL----D 476
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR AK++FPDL    +
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAKELFPDLPDATE 487

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             +        E   D SEL L+  LA +PR +E A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 ARIAFLKDANAERLTDPSELDLLRRLALFPRTVEAAALAHEPHRVAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 548 TRGRDLPHLRFIINNDAEITKARLAMVQGVVSVLASGLAILGVTAPDEM 596


>gi|240850752|ref|YP_002972152.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267875|gb|ACS51463.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 585

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/586 (51%), Positives = 425/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  ++  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++ +G+
Sbjct: 1   MNIFKNFEKKIKRSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGI 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ I+  +K D  ++++ +AG GFIN+ L+  + +  + S++ SG  YGR  +G+
Sbjct: 61  NPRALADKIIELLKNDSSIENIDVAGPGFINIKLTKLFWQDAIKSMLESGTSYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRVNVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFTGYNITKEYYINDAGQQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++  +LL   +++ L +VK+ ++ 
Sbjct: 181 SVLLRYREALGQEINEIPEGLYPGEYLIPLGQSLAQEFGDQLLTMDKDEALSLVKERAIH 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALNI HDIF SE   +  +   IR+ I++L   GY+Y+G LPPPK + T
Sbjct: 241 AMMTMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNT 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +    Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWEPSE-QTLFRSTNVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S  KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG 
Sbjct: 360 HAGYVKRLEAMAKAISGDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++     +F  
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEALHIKNFSN 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       D  E+ LI  L+EYPR+IE A I +EP++LAFYLYDLAS FH HW+ G
Sbjct: 480 DTL-IAHLHRLTDDHEILLIRKLSEYPRIIEQAVIHKEPHRLAFYLYDLASSFHTHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            EN  LRF+Q ++++L+  RL L+ AV +I++SGL IIGVE+P EM
Sbjct: 539 SENLNLRFIQPDDKELSFARLGLIQAVINILSSGLTIIGVEAPIEM 584


>gi|46201881|ref|ZP_00054144.2| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 576

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/585 (47%), Positives = 392/585 (67%), Gaps = 10/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF  F   +   ++ I     +      ++  E PR+ AHG ++TNAAM+L++  G+ 
Sbjct: 1   MNLFKYFREEIIKSVEAI-----IPGLDTSKVTAEPPRETAHGDVATNAAMVLTKAAGMK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  R++  P V  V +AG GFINL L+ S+  + L+ ++ +G+ YG++ +GKG
Sbjct: 56  PRDLAEKIAERLRAHPAVTEVEVAGPGFINLRLADSFWYERLAEVLAAGVTYGQSEMGKG 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMH+GH R AV GD LASL+  +GY+VTREYY+NDAG+Q++ LA S
Sbjct: 116 HKVNVEYVSANPTGPMHIGHARGAVFGDALASLLVKAGYDVTREYYVNDAGSQVDVLARS 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK  G+ LA K+   L +  EE+WLP ++ ++V A
Sbjct: 176 AFLRYREALGEEIGEIPEGLYPGEYLKPAGQALAKKHGPALKDKSEEEWLPELRSFAVDA 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ +I+DDL  L ++HD+F+SE     G    +++ +D L  QG +YEG+L PPK K   
Sbjct: 236 MLDMIKDDLAGLGVRHDVFVSERGLVEG--GKVQESLDYLNSQGLIYEGVLEPPKGKLPD 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +  R Q LF++T  GDDVDRPL KSDGS+TYFA+D+AY + KY RGF +MI V G+DH
Sbjct: 294 DWEA-RPQTLFKATGFGDDVDRPLKKSDGSWTYFASDIAYHQDKYRRGFASMIDVWGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKR++A   AVS+    ++V LC++V L + G P KMSKRAG F+TLR +V+ VG D
Sbjct: 353 GGYVKRMQAAVKAVSQGGGDLDVKLCQMVNLLKGGQPYKMSKRAGTFVTLRDLVEAVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRF+ML RKN   LDFD  KV EQS++NPVFYVQYA+ARC S+ R A  ++P+      
Sbjct: 413 VVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVMRHAAGMWPESVGHTP 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +V+      D +EL LI  LA +PR +E+A  A EP+++AFYLY+LA+ FHG W+ G+
Sbjct: 473 GVDVL--ARLTDPAELGLIRLLAGWPRQVESAAEAHEPHRVAFYLYELAAAFHGLWNKGK 530

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  LRF+   +R++++ RL L+ AV  +I SGL I GV    EM
Sbjct: 531 DDTSLRFLIEGDREVSLARLGLLRAVVGVIASGLGIFGVTPVEEM 575


>gi|312114440|ref|YP_004012036.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311219569|gb|ADP70937.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 585

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/586 (48%), Positives = 394/586 (67%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +R+++ L ++  +  + +   LD  V+E PR   HG L+TNAAM+L++P   
Sbjct: 1   MNIFQNFETRIRDILLQMQAEGMLPEDAKLDTFVVEPPRQATHGDLATNAAMVLAKPARQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I A++  DPDV+ V IAG GFINL L P+    +L +++  G +YGR  +G 
Sbjct: 61  NPKALAEAIAAKLAHDPDVEKVEIAGPGFINLTLKPAIWGDVLRTVLTQGADYGRGTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGH R AV GD LASL+ F+G++  REYYINDAGAQ++ LA 
Sbjct: 121 GQPVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGFKPAREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +  ++P G YPG YLK VG+ LA ++    L   E +WLP V++ ++ 
Sbjct: 181 SAHLRYREALGEDIGEIPAGLYPGDYLKPVGEALAKEFGDT-LRGDEAEWLPKVRERTIA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM+ +IRDDL +L I+H++F SE          I + ID L  +G +YEG L PPK K  
Sbjct: 240 AMLDLIRDDLASLGIKHEVFFSERSLTANGEDKIAETIDFLKAKGLIYEGRLAPPKGKLP 299

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFR+T  GDDVDR L KSDGSYTYFAAD+AY K K ERGF  +I V+G+D
Sbjct: 300 DDWE-DREQTLFRATDFGDDVDRALKKSDGSYTYFAADMAYHKTKIERGFKTLINVLGAD 358

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+KRL A   A+S  +AQ++V +C+LVRL+R G P+KMSKRAG F+TLR VVDEVG+
Sbjct: 359 HGGYIKRLTAAVKALSGGEAQVDVKICQLVRLFRGGEPVKMSKRAGSFVTLREVVDEVGA 418

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
             VRF+ML RKN   LDFDF KV EQS +NPVFYVQYA+AR  S+  +A + FPD+D   
Sbjct: 419 GPVRFIMLTRKNDATLDFDFEKVLEQSNDNPVFYVQYAHARACSVLGKAHEGFPDMDLSP 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +E+ +   LAEYPR++E A  A EP+++AFY +++A++FH  W+ G
Sbjct: 479 DSLAKADFSLLVDDAEVAIARKLAEYPRLVEQAAQAHEPHRVAFYAHEIAALFHSLWARG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +E P LRF+   +  +TM R+ L+   A ++ S L ++GVE+ +EM
Sbjct: 539 KELPHLRFMVPASSDITMARMALITGTALVLRSSLKLLGVEAISEM 584


>gi|83311628|ref|YP_421892.1| arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|109894999|sp|Q2W492|SYR_MAGMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|82946469|dbj|BAE51333.1| Arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 576

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/585 (47%), Positives = 390/585 (66%), Gaps = 10/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF  F   +   ++ I   +        ++  E PR+ +HG ++TNAAM+L++  G+ 
Sbjct: 1   MNLFKYFREEIIKSVEAIVPGLDT-----SKVTAEPPREVSHGDVATNAAMVLTKAAGMK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I   ++  P V  V +AG GFINL L+ S+  + L+ ++ +G  YG++ +G+G
Sbjct: 56  PRDLAEKIAEVLRAHPAVTGVEVAGPGFINLRLADSFWFERLAEVLAAGTAYGQSDLGRG 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMH+GH R AV GD LASL+  +GY+VTREYY+NDAG+Q++ LA S
Sbjct: 116 HKVNVEYVSANPTGPMHIGHARGAVFGDALASLLVKAGYDVTREYYVNDAGSQVDVLARS 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK  G+ LA K+   L + PEE+WLP ++ ++V A
Sbjct: 176 AFLRYREALGEEIGEIPEGLYPGEYLKPAGEALAKKHGPALKDKPEEEWLPELRGFAVDA 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ +I+ DL  L ++HD+F+SE      +   ++D +D L  +G +YEG+L PPK K   
Sbjct: 236 MLDMIKGDLAGLGVRHDVFVSERGLV--EAGKVQDALDYLTAKGLIYEGVLEPPKGKLPD 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +  R Q LF++T  GDDVDRPL KSDGS+TYFA+D+AY   KY RGF  MI V G+DH
Sbjct: 294 DWEA-RPQTLFKATEFGDDVDRPLKKSDGSWTYFASDIAYHLDKYRRGFGAMIDVWGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKR++A   AVSE    ++V LC++V L + G P KMSKRAG F+TLR +V+ VG D
Sbjct: 353 GGYVKRMQAAVKAVSEGGGDLDVKLCQMVNLLKGGQPYKMSKRAGTFVTLRDLVEAVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRF+ML RKN   LDFD  KV EQS++NPVFYVQYA+ARC S+ R A  ++PD    + 
Sbjct: 413 VVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVMRHAAGMWPDAVGPVP 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              V+      D +EL LI  LA +PR++E+A  A EP+++AFYLYDLA+ FHG W+ G+
Sbjct: 473 GVEVLAH--LTDPAELGLIRLLAGWPRLVESAAEAHEPHRVAFYLYDLAAAFHGLWNKGK 530

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  LRF+  ++R+L++ RL L+ AV  +I SGL I GV    EM
Sbjct: 531 DDTSLRFLIEDDRELSLARLGLLRAVVGVIASGLGIFGVAPVEEM 575


>gi|91977265|ref|YP_569924.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683721|gb|ABE40023.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 597

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/589 (50%), Positives = 404/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   +R+      +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HLFAHVLARVHAVCAVLTDEGVLPAGINLARIVVEPPKDASHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I  +++ +  +  V IAG GFINL L P+   + L +++  G  YGR+ +G  
Sbjct: 69  PRDLANKIAEKLRAEDQIAEVAIAGPGFINLTLKPAVWAQALRAVLDEGSAYGRSRVGGS 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDAAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +   +P+G YPG YL  VG ELA ++ S L   P+ +WLP+V+  S+  
Sbjct: 189 AFLRYREALGEDIGAIPDGLYPGDYLVPVGAELAAEHGSALKEMPDSQWLPLVRAKSIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++I+ DL AL I H++F SE     GD + + D ID L  +G VY+G LPPPK    +
Sbjct: 249 MMEMIKGDLAALAITHEVFFSERSLIEGDRNRVADTIDFLRAKGDVYQGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFGNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+E K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRMQAAITAVTEGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL----D 476
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A++ FPDL    D
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREAFPDLPESTD 487

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             +        E   D +EL L+  LA +PR +E A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 ARIAFLKDAKTERLTDPAELDLLRRLALFPRTVEAAALAHEPHRVAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL +V  V S++ SGL ++GV +P+EM
Sbjct: 548 TRGRDLPHLRFIINNDAEITKARLAMVQGVVSVLASGLAMLGVTAPDEM 596


>gi|85716513|ref|ZP_01047484.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A]
 gi|85696702|gb|EAQ34589.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A]
          Length = 597

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD  +R+      +  +  +   + L RIV+E P+D AHG ++TNAAM+L++     
Sbjct: 9   HLFADVLARVHKACAALAEEGALPSGLDLTRIVVEPPKDAAHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV +++ D  +++  IAG GFINL L       +L  ++  G  YGR+ IG G
Sbjct: 69  PRDLAERIVTKLRADDLIENAEIAGPGFINLTLRLPVWFDVLRDVLRDGEGYGRSAIGGG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +  ++P+G YPG YLK VG+ LA ++   L+  PE  WLP+V+  ++  
Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGRALAAEHGDSLVKAPEAGWLPLVRAKAIGM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G+   + + ID L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIEGNADRVAETIDFLREKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  +A ++V + +LV+L R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTSGRATLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++FPDL     
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487

Query: 481 PR----NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R         E   D +EL L+  LA YPR +E A  A EP+++AFYLYDLAS FH  W
Sbjct: 488 ARKQFLGTADMERLSDPAELGLLRRLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHTLW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL LV  V +++ SGL ++GV +P EM
Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596


>gi|49475743|ref|YP_033784.1| arginyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647809|sp|Q6G316|SYR_BARHE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49238550|emb|CAF27790.1| Arginyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 585

 Score =  651 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/586 (51%), Positives = 425/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  L+  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++  GL
Sbjct: 1   MNVFKNFEKKIKKSLESSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSTGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I+  +K DP V+S+ +AG GFIN+ L+  + + ++ S++  GI YGR  +G+
Sbjct: 61  NPRALAEKIIELLKNDPSVESINVAGPGFINIKLTKPFWQDLIKSMLEKGISYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++  +LL   +E+ L IVK+ ++ 
Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFGDKLLTIDKEEALSIVKERAIH 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL ALNI HDIF SE   +  +   IR+ I++L  +GY+Y+G LPPPK + T
Sbjct: 241 EMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLKGYIYKGKLPPPKGQNT 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWE-PCEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S  KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVGS
Sbjct: 360 HAGYVKRLEAMAKAISNDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGS 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++     +   
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQETLCIENIS- 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             + +       D +E+ LI  L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ G
Sbjct: 479 NDKIIEHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHTHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +N  LRF+Q ++R L+  RL L+ A+ +I++SGL I+G+++  EM
Sbjct: 539 SDNLNLRFIQPDDRNLSFARLGLIQAIMNILSSGLAIVGIKAATEM 584


>gi|316933987|ref|YP_004108969.1| arginyl-tRNa synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601701|gb|ADU44236.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 592

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/589 (50%), Positives = 404/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+      +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 4   HLFARLLSRVHAVCAGLIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ +  +D V IAG GFINL L P+   + L +++ +G  YGR+ +G G
Sbjct: 64  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGTGYGRSAVGGG 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+  +G+ VTREYYINDAGAQ++ LA S
Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGFAVTREYYINDAGAQVDVLARS 183

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL     ++PEG YPG YLK VG  L  ++ + L   PE +WLP V+  ++  
Sbjct: 184 AFLRYREALGEAIGEIPEGLYPGDYLKPVGVALKAEHGAALKELPEAQWLPTVRAKAIAM 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM+ I+ DL ALNI H++F SE     G  + + + I+ L  +G VY+G LPPPK    +
Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH
Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVG D
Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGFD 422

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A+++ PDL  D  
Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482

Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R       P E   D +EL+L+  LA YPR++E A  A EP+++AFYL +LAS FH  W
Sbjct: 483 ARAAMLRQAPLERLSDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +HGR+ P LRF+  N+ ++T  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591


>gi|90424008|ref|YP_532378.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|109895028|sp|Q214X7|SYR_RHOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|90106022|gb|ABD88059.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 597

 Score =  650 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/589 (51%), Positives = 404/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA   SR+    + +  +  +   I L RIV+E P+D +HG ++TNAAM+L++     
Sbjct: 9   HLFAVMLSRVHAVCEALAAEGALPAGIDLARIVVEPPKDASHGDMATNAAMVLAKEAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  +++ D  V +V +AG GFINL L P    + L +++  G  YGR+ +G G
Sbjct: 69  PRDLAEKIAEKLRADDLVAAVEVAGPGFINLTLQPKVWSEALRTVLADGAGYGRSAVGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              R ++AL     ++PEG YPG YLK VG+ LA +Y  +LL   E +WLPI +  S+  
Sbjct: 189 ALLRTREALGEEIGEIPEGLYPGDYLKPVGEALAAEYGDKLLAMDEAEWLPIARAKSIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI H+ F SE     GD   +   ID L  +G VYEG LPPPK    +
Sbjct: 249 MMQMIRGDLAALNITHEEFFSERSLIAGDTDRVAATIDFLRGKGDVYEGRLPPPKGAPIE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++RGF NMI V GSDH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGFRNMIDVWGSDH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  +  ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTGGQGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+N VFYVQY +AR  S+FR A+++ PDL  +  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVVPDLPEETV 487

Query: 481 PRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R         E   DT+EL L+  LA YPR++E A +A EP+++AFYLY+LAS FH  W
Sbjct: 488 ARAAFLADAAVERLTDTAELGLLRQLALYPRIVEAAALAHEPHRIAFYLYELASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL LV    S++ SGL ++GV +P+EM
Sbjct: 548 TRGRDLPHLRFIINNDAEITKARLALVQGAVSVLASGLAVLGVHAPDEM 596


>gi|299134946|ref|ZP_07028137.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298589923|gb|EFI50127.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 597

 Score =  650 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/589 (51%), Positives = 406/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD   R+    +++  +  + + I L RIV+E P+D  HG ++TNAAM+L++   + 
Sbjct: 9   HLFADILGRVHGVCRDLMTEGVLPEGIDLSRIVVEPPKDATHGDMATNAAMVLAKEAKVK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I  +++ DP V +V +AG GFINL L      + L +++ +G  YGR+ +G G
Sbjct: 69  PRDLADRISDKLRTDPLVLAVSVAGPGFINLTLKNEAWFEALRTVLRTGEGYGRSHVGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LA+L+A +GY VT+EYYINDAGAQ++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLASAGYAVTKEYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL     ++PEG YPG YLK VG+ LA +Y  +L+  PE +WLP+V+D S+  
Sbjct: 189 AHLRYREALGETIGEIPEGLYPGDYLKPVGEALAREYGDKLVKQPEAEWLPLVRDKSIGM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G    +   I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIAGGTDQVGATIAGLRAKGDVYEGHLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSD SYTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDNSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  + +++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD
Sbjct: 368 GGYIKRVQAAIKAVTAGEGELDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  S+F+ A+   PDL  D  
Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARATVPDLPEDDG 487

Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R         E   D  EL LI  LA +PR +E+A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 KRRAYLGSAEVERLNDPVELSLIRQLALFPRTLESAALAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+  +T  RL LV  V S++ SGL ++GV +PNEM
Sbjct: 548 TKGRDAPHLRFIMENDAGITTARLALVQGVVSVLASGLAVLGVHAPNEM 596


>gi|260433438|ref|ZP_05787409.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417266|gb|EEX10525.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 581

 Score =  650 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/586 (46%), Positives = 394/586 (67%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D   R+ + L ++  +  + + +  D + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFSDIRGRVLDALTQMQSEGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL L+PS  + +L +++  G +YGR+ +G+
Sbjct: 61  KPRDIAETLAAKLAEDERITSAEVAGPGFLNLRLAPSVWQGVLGAVLEKGTDYGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA 
Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A      ++ EG YPG YL  +G+ L +KY   LL+ PE +WL  V++++ +
Sbjct: 181 SAYERYREA-NGLSPEIAEGLYPGDYLIPIGEALKEKYGDSLLDKPESEWLAEVREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DLKAL ++ D+F SE   +      I   ++ L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIRADLKALGVEMDVFFSEKSLY--GTGKIEAALEALNEKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +   D+  + 
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIDVSDET 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   +    +EL +   LAE+PR++E A    EP+++AFYLY+LA  FH  W+ G
Sbjct: 477 LRGADL--AALDHPAELTVARKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q  +   +  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 535 NDEPALRFLQDGDVATSQSKIALARAVSVVISAGLGILGVTPAQEM 580


>gi|115524697|ref|YP_781608.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518644|gb|ABJ06628.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 597

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/589 (50%), Positives = 404/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFA    R+    + ++ +  + + + L R+V+E P+D  HG ++TNAAM+L++     
Sbjct: 9   HLFALMLGRVHAVCRALEGEGALPQNLDLARVVVEPPKDPTHGDMATNAAMVLAKEAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I A+++ D  V SV +AG GFINL L+P      L +++  G  YGR+ +G  
Sbjct: 69  PRDLAEAIAAKLRADDLVASVEVAGPGFINLTLAPKVWADALRTVLAQGARYGRSSVGAK 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S
Sbjct: 129 QKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              RY++AL  +  ++PEG YPG YLK VG+ L  ++   LL  PE +WLP+V+  S+  
Sbjct: 189 ALLRYREALGEDIGEIPEGLYPGDYLKPVGEALKAEHGDRLLALPEAEWLPLVRAKSIAM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI H+ F SE     G    + + I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNITHEEFFSERSLIEGGSDRVGETIAFLRAKGDVYEGRLPPPKGAPIE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPLLKSDGSYTYFA+D+AY K K++RG+  M+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGYRTMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV++ K  ++V + +LV+L R+G P+KMSKR+GDF+TLR VV+EVGSD
Sbjct: 368 GGYIKRVQAAIKAVTDGKGDLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVEEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + RFMML+RKN  +LDFD  KV EQSK+N VFYVQY +AR  S+FR A+++ PDL  +  
Sbjct: 428 ATRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVIPDLPEEAA 487

Query: 481 PRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R    Q    E   DT+EL L+  LA YPRV+E A +A EP+++AFYLYDLAS FH  W
Sbjct: 488 ARAAFLQDAAVERLTDTAELDLLRRLALYPRVVEAAALAHEPHRVAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+  +T  RL LV    S+I SGL ++GV++P EM
Sbjct: 548 TRGRDLPHLRFIINNDALITKARLALVQGAVSVIASGLAVLGVDAPTEM 596


>gi|154248165|ref|YP_001419123.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|238686740|sp|A7IN73|SYR_XANP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|154162250|gb|ABS69466.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 586

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/586 (49%), Positives = 396/586 (67%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M ++A F+  ++  +  +  +  + K + L R+V+E PRD +HG L+TNAAM+L++  GL
Sbjct: 1   MNVYAIFADHVREAVAALVAEGIIAKDLDLARVVVEPPRDASHGDLATNAAMVLAKDAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I  ++     V  V +AG GFIN+ L  ++   +L++++  G+++GR+ +G 
Sbjct: 61  KPRELAERIAGKLGTVAGVKKVDVAGPGFINIALDGTFWPVVLAAVLTQGLDFGRSALGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AV GD LA LM F+G+ VT+EYYINDAGAQ++ LA 
Sbjct: 121 GEKVNVEYVSANPTGPMHVGHCRGAVFGDALARLMDFAGFAVTKEYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL     ++PEG YPG YL  VG++LA  +   L    E  WLP+V+  ++ 
Sbjct: 181 SAFLRYREALGEAIGEIPEGLYPGDYLVPVGQKLAAAHGPALKEKSETDWLPLVRAEAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  IR+DL AL I  D+F SE     G    +   I+ L   G VYEG LPPPK    
Sbjct: 241 TMMVAIREDLAALGISFDVFFSERSLSTGAVDRVGAAIEALRASGEVYEGRLPPPKGAPI 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST  GDDVDRPL KSDGSYTYFA D+AY K K +RGF  MI V G+D
Sbjct: 301 EDWE-DREQTLFRSTDFGDDVDRPLKKSDGSYTYFAGDIAYHKDKVDRGFLKMIDVWGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS  +A ++V L +LVRL+R G P++MSKR+G F+TLR VVDEVG 
Sbjct: 360 HGGYVKRMQAAVKAVSGGRATLDVELIQLVRLFRAGEPVRMSKRSGSFVTLREVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN   LDFD  KV EQS+ENPVFYVQYA+AR +SI R A + F DL    
Sbjct: 420 DAVRFMMLFRKNDAPLDFDLAKVIEQSRENPVFYVQYAHARAKSILRNAAEEFADLPQQA 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P     D  E+ L+  LA +PR++E A  A+EP++++F+L++LAS FHG W+ G
Sbjct: 480 ASFATAPLARLDDEGEITLLRRLASWPRLVEQAAGAREPHRISFFLHELASEFHGQWNRG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ P LRF+  N+R+LT  RL LVH VA+++ SGL ++GV + +EM
Sbjct: 540 KDLPHLRFIIENDRELTSARLALVHGVATVLASGLKVLGVTAVDEM 585


>gi|148255782|ref|YP_001240367.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166232760|sp|A5EJW7|SYR_BRASB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146407955|gb|ABQ36461.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 598

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/591 (50%), Positives = 402/591 (68%), Gaps = 7/591 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           ++LFAD  +R+      +       + I + R+V+E PRD +HG ++TNAAM+L++    
Sbjct: 8   LHLFADVLARVHAICAALAKDGNWPEGIDVSRVVVEPPRDPSHGDMATNAAMVLAKEAKA 67

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I  R++ D  V  V +AG GFINL L P    + L +I+  G  YGR     
Sbjct: 68  KPRDLAEAIAERLRADELVAKVDVAGPGFINLTLHPVVWARQLGTILRDGDAYGRIAPVV 127

Query: 120 G-TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           G  KVN+E+VSANPTGPMHVGHCR AV GD L SL+ F+G +VTREYYINDAGAQ++ LA
Sbjct: 128 GAPKVNVEYVSANPTGPMHVGHCRGAVFGDALCSLLQFAGRDVTREYYINDAGAQVDVLA 187

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S F RY++AL      +PEG YPG YLK VG+ LA ++   L   PE +WLPIV+D ++
Sbjct: 188 RSAFLRYREALGEEIGAIPEGLYPGDYLKPVGQALAAEHGDRLKAMPEAQWLPIVRDKAI 247

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             MM  I+DDL ALNI+HD+F SE     G  + + + I+ L  +G VYEG LPPPK   
Sbjct: 248 AMMMAEIKDDLAALNIRHDVFFSERSLIAGSTNKVAETIEFLRERGDVYEGRLPPPKGAP 307

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR+QLLFR+T  GDDVDRPL+KSDGSYTYFA+D+A  + K+ERGF ++I V G+
Sbjct: 308 VEDWE-DREQLLFRATAYGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGA 366

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+KR++A   AV+  +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG
Sbjct: 367 DHGGYIKRMQAAVKAVTAAQAVLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVG 426

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VRFMML+RKN  +LDFD  KV EQS++NPVFYVQY +AR  SIFR A+D FP L  +
Sbjct: 427 RDAVRFMMLYRKNDAVLDFDLAKVIEQSRDNPVFYVQYGHARGHSIFRNARDSFPSLPVE 486

Query: 479 LFPRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
              R         E   D SE+ L+  LA YPR +E+A +A EP+++AFYLYDLAS FH 
Sbjct: 487 EGARLAFLRQAKLEKLADPSEIDLLKRLALYPRTVESAALAHEPHRVAFYLYDLASEFHA 546

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            W+ GR+ P LRF+  ++ +LTM RL +V  V S++ SGL I+GV +P+ M
Sbjct: 547 LWTRGRDLPYLRFIIDDDAELTMARLAMVQGVVSVLASGLAILGVNAPDAM 597


>gi|319898837|ref|YP_004158930.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402801|emb|CBI76352.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 588

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/589 (53%), Positives = 427/589 (72%), Gaps = 6/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +++K  ++  D K K  K + L +IV + PRD  HG LSTNAAM+L++ +GL
Sbjct: 1   MNVFKNFENKIKKLIELSDIKEKNGKILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           +P  +AE I+  +  D     +D + +AG GFIN+  + S+ ++ L +++  GI YGR  
Sbjct: 61  NPRALAEKIIELLNNDQSFDYIDHINVAGPGFINIKFTQSFWQETLKTMIEKGISYGRTE 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+G+EVT+EYYINDAG QI  
Sbjct: 121 IGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGHEVTKEYYINDAGEQIKI 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA SV  RY++AL    S++PEG YPG YL  +G+ LA K+  +LL   +E+ L IVK++
Sbjct: 181 LAHSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAQKFGEKLLIIDQEEALSIVKEH 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++ +MM IIR DL ALNI HD+F SE   +  +   IR  I++L   GY+Y+G LPPPK 
Sbjct: 241 AIDSMMAIIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  +  R+Q LFRST +GDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++
Sbjct: 301 QNIEDWE-PREQTLFRSTDIGDDQDRALIKSDGSYTYFAADVAYFRDKFNRHFDEMIYIL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GYVKRLEAVA A+S  KA + VLLC+LV+L+RDG P++MSKRAG F+TLR VV+E
Sbjct: 360 GADHTGYVKRLEAVAKAISGNKATLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC SIFRQ ++ F   +
Sbjct: 420 VGYDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSIFRQTQESFLTEN 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                  +   +   D SE+ LI  LAEYPR+IE A I +EP++LAFYLYDLAS FHGHW
Sbjct: 480 LS-NDTMIAHLDQLVDESEILLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDLASHFHGHW 538

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++P EM
Sbjct: 539 NKGNDNPNLRFIKTDNKELSLARLGLIQAIINILSSGLTIIGVKAPTEM 587


>gi|304391801|ref|ZP_07373743.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296030|gb|EFL90388.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 587

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/586 (51%), Positives = 401/586 (68%), Gaps = 4/586 (0%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +F DF  R+ N L+ +   ++     + R+ +E PRD +HG L+TNAAMIL++P+  +P
Sbjct: 3   NVFQDFEQRITNVLQALPDVVE-SGADVSRLTVEPPRDLSHGDLATNAAMILAKPMKTNP 61

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A  I A ++ D DV SV IAG GFINL L   +  + L+ ++  G  YG +  G G 
Sbjct: 62  RALAATIAAELEKDADVASVEIAGPGFINLRLVDGFWSRELTRVLTEGRRYGADATGNGK 121

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KVN+E+VSANPTGPMHVGHCR AVVGD +A+L+ F+GY+V REYY NDAG QI+ LA S 
Sbjct: 122 KVNVEYVSANPTGPMHVGHCRGAVVGDAMANLLEFAGYDVVREYYTNDAGGQIDVLARSA 181

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           F RY++AL  +   +PEG YPG YLK +G+ L D +   LL   E   L IV+  ++ AM
Sbjct: 182 FLRYREALGQDIGKIPEGLYPGEYLKPLGQSLVDAHGDALLTMDESDMLAIVRPAAIDAM 241

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           M +IR DL AL + HD+F SE   H G    S I   ++ L   G VY G LPPPK    
Sbjct: 242 MDLIRADLAALGVHHDVFFSERSLHAGGEQGSAISKAVNRLTDMGLVYTGTLPPPKGTAP 301

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+QLLFRST VGDD+DR L KS G YTYFAAD+ YF+ K++RGF+ M++V+G+D
Sbjct: 302 EDWE-DREQLLFRSTDVGDDMDRALQKSSGDYTYFAADVGYFQDKFDRGFEEMVFVLGAD 360

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR+EA+  A+SE  A++ + LC+LV+L+RDG P+ MSKR+G+FITLR VVDEVG 
Sbjct: 361 HGGYVKRMEALGKAISEDTAKVTIRLCQLVKLFRDGEPVTMSKRSGNFITLREVVDEVGR 420

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN   LDFDF KVKEQS++NP+FYVQYA+ARC S+ RQA    P+LD   
Sbjct: 421 DAVRFMMLYRKNDAPLDFDFAKVKEQSRDNPIFYVQYAHARCHSVLRQAARDMPNLDISA 480

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E   D  E  L+  LAEYPRVI+ A  +QEP++L+FYLYDLA++ HG W+ G
Sbjct: 481 DALRAAKTELLLDDGEDGLMRKLAEYPRVIDAAARSQEPHRLSFYLYDLAALLHGQWNKG 540

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R++  LRF+   N +LT+ RL LV AV+ II SGL IIG ++P EM
Sbjct: 541 RDDVTLRFIHQENPELTLARLGLVTAVSEIIASGLAIIGADAPQEM 586


>gi|75675999|ref|YP_318420.1| arginyl-tRNA synthetase, class Ic [Nitrobacter winogradskyi Nb-255]
 gi|109895011|sp|Q3SRM3|SYR_NITWN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|74420869|gb|ABA05068.1| arginyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 597

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/589 (50%), Positives = 403/589 (68%), Gaps = 6/589 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +LFAD  +R+      +  +  +   + L RIV+E PRD +HG ++TNAAM+L++     
Sbjct: 9   HLFADVLARVHRACAALAEEGALPSGLDLARIVVEPPRDASHGDMATNAAMVLAKDAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV +++ D  ++S  IAG GFINL L       +L  ++  G  YGR+ IG G
Sbjct: 69  PRDLAERIVTKLRADDLIESADIAGPGFINLTLKLPVWADVLRDVLRDGEGYGRSAIGAG 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F RY++AL  +  ++P+G YPG YLK VG+ LA  +   L+  PE +WL +V+  ++  
Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGQALAAGHGDSLVKAPEAEWLGLVRAKAIGM 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM++IR DL ALNI+HD+F SE     G    + + I  L  +G VYEG LPPPK    +
Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIDGSADRVAETIGFLREKGDVYEGRLPPPKGAPVE 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFR+T  GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH
Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KR++A   AV+  K  ++V + +LV+L R+G P+KMSKRAGDF+TLR VV+EVGSD
Sbjct: 368 GGYIKRVQAAIKAVTSGKGTLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVEEVGSD 427

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRFMML+RKN  +LDFD  +V EQSK+NPVFYVQY +AR  SIFR A+++FPDL     
Sbjct: 428 AVRFMMLFRKNDAVLDFDLARVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487

Query: 481 PR----NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            R         E   D +EL L+  LA YPR +E A  A EP+++AFYLYDLAS FH  W
Sbjct: 488 ERRQFLGTADLERLSDPAELGLLRKLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHALW 547

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + GR+ P LRF+  N+ ++T  RL LV  V +++ SGL ++GV +P EM
Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596


>gi|121602184|ref|YP_989046.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166232758|sp|A1USU3|SYR_BARBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120614361|gb|ABM44962.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 585

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/586 (53%), Positives = 421/586 (71%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  LKE D K K  + + L +I ++ PRD  HG LSTNA+M+L++ +GL
Sbjct: 1   MNVFKNFEQKIKKSLKESDIKGKNGENLDLSKITVDPPRDSLHGDLSTNASMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P T+AE I+A +K DP +D + +AG GFIN+ L+ S+   +L  ++ SG +YGR  IG+
Sbjct: 61  NPRTLAEKIIALLKDDPSIDHLEVAGSGFINIKLTKSFWHDVLKLMITSGTDYGRTQIGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY VT+EYYINDAG QI  LA 
Sbjct: 121 GKQVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLQFAGYNVTKEYYINDAGKQIEILAA 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    + +PEG YPG YL  +G+ L  ++  +LL    EK L IVK+ S+ 
Sbjct: 181 SVLLRYREALGETINKIPEGLYPGEYLIPLGQSLVQEFGDKLLTMDNEKALSIVKERSID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  LNI HD+F SE   +  +   IR+ I++L   GYVY+G L PPK +T 
Sbjct: 241 AMMTMIRQDLATLNIHHDVFFSERMLYMNNAQAIRNTINDLTLNGYVYKGKLSPPKGQTL 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIYV+G+D
Sbjct: 301 EDWE-PHEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFHRHFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEAVA A+S  KA++   LC+LV+L+R+G P++MSKR G FITLR VV EVG 
Sbjct: 360 HAGYVKRLEAVAKAISGNKAKLTAFLCQLVKLFRNGHPVRMSKREGSFITLRDVVKEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFD  KV EQSK+NP+FYVQYA+ARC S+FRQA++    ++   
Sbjct: 420 DPVRFMMLYRKCEAPLDFDLEKVTEQSKDNPIFYVQYAHARCHSVFRQAQENLQ-IENPS 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +   +   + SE+ LI  LA+YPR+IE A + +EP++LAFYLYDLAS FHGHW+ G
Sbjct: 479 NDLMIAHLDQLTNDSEISLIHKLAQYPRIIEQAIVYKEPHRLAFYLYDLASNFHGHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP LRF++ NN+KL++ RL LV A  ++++SGL I+ V++P EM
Sbjct: 539 NDNPELRFIKPNNKKLSLARLGLVQAFINVLSSGLKIVEVKAPTEM 584


>gi|220922162|ref|YP_002497463.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254782972|sp|B8I9T2|SYR_METNO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219946768|gb|ACL57160.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 590

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/591 (49%), Positives = 394/591 (66%), Gaps = 8/591 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F  R+   L  +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFAAFEERIGEALASLTRAGQLPEGLDLGRVVVEPPRDPSHGDLATNAALVLAKEART 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE + A ++ DP V    +AG GF+NL L+P     ++ + + +G  +GR     
Sbjct: 61  NPKALAERLAAELRSDPRVTEASVAGPGFLNLRLAPQVYGDVVRAALRAGEAFGRGAKQP 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G   N+E+VSANPTGPMHVGH R AV GD LA+L+  +G EV REYYINDAGAQ++ LA 
Sbjct: 121 GLV-NVEYVSANPTGPMHVGHGRGAVFGDALANLLVAAGREVVREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL      +PEG YPG YLK VG  LA  +   LL  PE +WLP+V++ ++ 
Sbjct: 180 SAFLRYREALGEEIGTIPEGLYPGDYLKPVGAMLAKTHGRSLLGKPEAEWLPLVREAAIG 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-----PIRDIIDNLARQGYVYEGILPPP 294
           AMM+ IR+DL AL I+HD+F SE     G         +  +I+ L  +  VY G LPPP
Sbjct: 240 AMMERIREDLAALGIRHDVFFSERTLQEGGKEGGEGGAVARLIEALRARDLVYVGRLPPP 299

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           K +  +  + DR Q LFRST  GDD+DRPLLKSDGSYTYFA+D+AY   K ERG   +I 
Sbjct: 300 KGQLPEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGSYTYFASDIAYHASKVERGATELID 358

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G+DH GYVKR++A   AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+
Sbjct: 359 VLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVI 418

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DEVG D VRFMML+RKN   LDFD  KV EQSK+NPVFYVQYA+AR  S+FRQA++ FP 
Sbjct: 419 DEVGRDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPG 478

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D               D+ E +++  +A+YPRV+E+A  A EP++LAFYLY+LAS FH 
Sbjct: 479 EDLSAEALAGADLSLLTDSGEAEIMRLIAQYPRVVESAGSAHEPHRLAFYLYELASAFHS 538

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            W+ G++ P+LRFV   +R  T+ RL LV A+  ++ SGL I+GV +P+EM
Sbjct: 539 FWNKGKDLPQLRFVNQTDRMSTLSRLALVAALRGVLASGLGILGVTAPDEM 589


>gi|319405600|emb|CBI79223.1| Arginyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 588

 Score =  646 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/589 (52%), Positives = 427/589 (72%), Gaps = 6/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +++K  ++  D K K E+ + L +IV + PRD  HG LSTNAAM+L++ +GL
Sbjct: 1   MNVFNNFENKIKKLIELSDIKGKNEEILDLSKIVTDPPRDSLHGDLSTNAAMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSV---FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           +P  +A+ I+  I  D   +++    +AG GFIN+  + S+ +  L S++  GI YG+  
Sbjct: 61  NPRALAQKIINLINSDQSFENINHIDVAGPGFINIKFTQSFWQNALKSMIEKGISYGQIQ 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI  
Sbjct: 121 IGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGYEVTKEYYINDAGEQIKV 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA SV  RY++AL    S++PEG YPG YL  +G+ LA K+S +LL   +++ L IV ++
Sbjct: 181 LARSVMLRYREALGEKISEIPEGLYPGEYLIPLGQSLAKKFSDKLLIIDQKEALSIVAEH 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++ AMM +IR DL ALNI HD+F SE   +  +   IR  I++L   GY+Y+G LPPPK 
Sbjct: 241 AIDAMMVMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  +  R+Q LFRST +GDD DR L+KSDGSYTYFA D+AYF+ K+ R FD MIY++
Sbjct: 301 QNLEDWE-PREQTLFRSTDIGDDQDRSLIKSDGSYTYFATDVAYFRDKFNRHFDEMIYIL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GYVKRLEAVA A+S  KA++ VLLC+LV+L+R G P++MSKRAG F+TLR VV+E
Sbjct: 360 GADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRHGRPVRMSKRAGSFVTLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D +RFMML+RK    LDFDF KV E+SK+NP+FYVQYA+ARC SIFRQA+++F + +
Sbjct: 420 VGHDPIRFMMLYRKCEVPLDFDFAKVTEKSKDNPIFYVQYAHARCHSIFRQAQEVFLNEN 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                      +   D SE+ LI  LAEYPR+IE A   +EP++LAFYLYDLAS FHGHW
Sbjct: 480 PSNHTMTA-HLDQLIDESEILLIRKLAEYPRIIEQAVTHKEPHRLAFYLYDLASYFHGHW 538

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G +NP LRF+  +N++L++ RL L+ A+ +I++SGL IIGV++P EM
Sbjct: 539 NKGNDNPNLRFIIPDNKELSLARLGLIQAILNILSSGLTIIGVKAPTEM 587


>gi|254501189|ref|ZP_05113340.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222437260|gb|EEE43939.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 579

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/579 (51%), Positives = 401/579 (69%), Gaps = 5/579 (0%)

Query: 11  LKNYLKEIDCKI-KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +K  L+ ++ +        L R+V+E PRD AHG  +TNAAM+L++PLG+ P  +AE +V
Sbjct: 1   MKKCLEALELEGPDGNAPDLSRVVVEAPRDPAHGDFATNAAMVLAKPLGMKPRDLAERLV 60

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             +  DP++    +AG GFINL ++ S  +KIL  I+  G+ YG       +KVN+E+VS
Sbjct: 61  VELSKDPEITETTVAGPGFINLRVAQSVWQKILGRILAEGLGYGGTKTADPSKVNVEYVS 120

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGPMHVGH R AVVGD LA+L+ F+G EV +EYYINDAG+QI+TLA S F RY++AL
Sbjct: 121 ANPTGPMHVGHIRGAVVGDALANLLEFAGNEVVKEYYINDAGSQIDTLARSAFLRYREAL 180

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
             +  ++P G YPG YL  VG  L D++ S+L +  E  WLP VK+ ++ AM+++IR DL
Sbjct: 181 GEDIGEIPAGLYPGDYLVPVGVALKDEFGSDLRDQDEADWLPKVKERAISAMLELIRSDL 240

Query: 250 KALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            AL ++H++F SE   H     + S I  ++D L  +G VYEG LPPPK +  +  + DR
Sbjct: 241 AALGVEHEVFFSERSLHERSDSNGSKIDHMLDGLRAKGLVYEGTLPPPKGQVPEDWE-DR 299

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
           +Q LFR++  GDD DR L KSDGSYTYFAAD+AYF+ K++RGF   IYV+G+DH GY KR
Sbjct: 300 EQTLFRASDYGDDTDRALKKSDGSYTYFAADVAYFEDKFKRGFKEAIYVLGADHGGYAKR 359

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L+AV  AVS    ++ V  C+LV+L RDG P+KMSKR+GDFITLR VVDEVGSD VRFMM
Sbjct: 360 LQAVGKAVSGGDTEVIVRFCQLVKLMRDGAPVKMSKRSGDFITLREVVDEVGSDPVRFMM 419

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L+RKN   LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA +     D          
Sbjct: 420 LFRKNDAPLDFDFKKVTEQSKDNPVFYVQYGHARCCSVLRQAAEELSGQDLGDSVLASAD 479

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                DT EL+LI  +AE+P+V+E A    EP+++AFYL++LAS  HGHW+ G+E P LR
Sbjct: 480 YSLLDDTGELELIGKMAEWPKVVEAAADTHEPHRIAFYLHELASSLHGHWNRGKELPHLR 539

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ ++N KLT+ R+ LV AV+ +++SGL I+GV++P EM
Sbjct: 540 FIDSSNTKLTVARVALVRAVSLVLSSGLAILGVQAPEEM 578


>gi|254486265|ref|ZP_05099470.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043134|gb|EEB83772.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 580

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/586 (46%), Positives = 387/586 (66%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +  +  + + +  D I +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFADIRTLVLSALDALVAEGFLPEGLNFDAIAVEPPRDAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  D  + S  +AG GF+NL L+PS  + I+ +++  G ++GR  +GK
Sbjct: 61  KPREIAERLAVKLVDDARISSADVAGPGFLNLRLAPSVWQGIVGAVLAEGTDFGRGDLGK 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGWDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   P+G YPG YL  VG+ L  K     ++  E  WL  V++++ +
Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIGVGEALKAKVGDAYIDQDESVWLEDVRNFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MMK+IRDDL +L ++ D+F SE   +      I   I++L  +G +YEG+L PPK K  
Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGKIEAAIEDLKSKGLIYEGVLEPPKGKLP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K +RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S     +++ L +LV+L++DG   KMSKRAG F+TLR VVD+VGS
Sbjct: 357 HGGYVKRMKAAVSALSGGTVPLDIKLTQLVKLFKDGKEFKMSKRAGTFVTLRDVVDQVGS 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +     D   
Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVNSVLRKAAEAGVATDLAA 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        +EL+L   LAE+PR++E A  + EP+++AFYLY+LA  FHG W+ G
Sbjct: 477 LQAADLGL--LDHEAELKLAAKLAEWPRLVETAARSNEPHRVAFYLYELAGDFHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++  ++  ++ L  A A +I SGL I+GV    EM
Sbjct: 535 NDVPSLRFLQ-DDAAVSQAKIALAKATAIVIASGLGILGVTPAEEM 579


>gi|126729733|ref|ZP_01745546.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37]
 gi|126709852|gb|EBA08905.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37]
          Length = 580

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/586 (47%), Positives = 381/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + +  +  +  +   +  D +  E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFADIRALVLDAITTLVTEGVLPDGLNTDAVTTEPPRDPAHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP V S  +AG GF+NL L PS  + +  +I+  G  YGR+ +GK
Sbjct: 61  KPRDIAEALAVKLADDPRVASAEVAGPGFLNLRLEPSVWQALPKAILGGGTAYGRSDMGK 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVNIE+VSANPTGPMHVGH R A+VGD +ASL+A++GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GEKVNIEYVSANPTGPMHVGHARGAIVGDAMASLLAYAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RYQ+A ++   D PEG YPG YL  VG+ L DK     L  PE+ WLP V++++  
Sbjct: 181 SVYLRYQEA-HDLSVDWPEGSYPGDYLIPVGEALKDKVGDVWLEAPEKVWLPEVREFATA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL AL +  D+F SE   +      I   ID L   G +Y G+LP PK K  
Sbjct: 240 AMMALIRDDLAALGVHMDVFFSEKSLY--GTGRIEAAIDALKEMGLIYWGVLPKPKGKAE 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + +R+Q LF+ST  GDD DRP++K+DGS+ YFA D+AY   K +RGFD +I + G+D
Sbjct: 298 EDWE-EREQWLFKSTDFGDDEDRPVMKADGSWAYFAPDIAYHYDKVQRGFDLLINIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRL+AV  A+S+ +  +++ L +LV+L+++G P KMSKRAG FITLR +VDEVG+
Sbjct: 357 HGGYVKRLKAVVKALSQDRVPLDIKLIQLVKLFKNGAPFKMSKRAGTFITLRDLVDEVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RK+   LDFDF KV EQSKENPVFYVQYA+AR  S+ R+A      +D   
Sbjct: 417 DVARFHMLTRKSDATLDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAG--AEGIDVSD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +EL L   LAE+PR++E A    EP+++A YL +LA+  HG W+ G
Sbjct: 475 ATLAAQDLSGMTHPAELHLAAKLAEWPRLVEIAARTHEPHRVATYLGELAADLHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++   T  ++ L  A A +I++GL I+GV    EM
Sbjct: 535 NDEPALRFLQ-DDPVATQSKIALARATAVVISAGLGILGVTPVEEM 579


>gi|163852810|ref|YP_001640853.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|254782971|sp|A9W7L3|SYR_METEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163664415|gb|ABY31782.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 585

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/587 (47%), Positives = 399/587 (67%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR     
Sbjct: 61  NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQ-MP 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL      +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGMRLAETHGRTLLDQPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477

Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W+ 
Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|218531636|ref|YP_002422452.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254782970|sp|B7KWG7|SYR_METC4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218523939|gb|ACK84524.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 585

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/587 (47%), Positives = 399/587 (67%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR     
Sbjct: 61  NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQ-MP 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL      +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477

Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W+ 
Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|319407165|emb|CBI80804.1| Arginyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 588

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/589 (53%), Positives = 423/589 (71%), Gaps = 6/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +++K  ++  D K K  + + L +IV + PRD  HG LSTNAAM+L++ +GL
Sbjct: 1   MNVFKNFENKIKKLIESSDIKGKNGEILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            P  +AE I+  +  D    D+D + IAG GFIN+    S+ +  L S++  GI YG+  
Sbjct: 61  SPRALAEKIIKLLNSDQSVSDIDHIDIAGPGFINIKFKQSFWQNALKSMIEKGISYGQIE 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI  
Sbjct: 121 IGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIKI 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA SV  RY+QAL    S++PEG YPG YL  +G+ LA K+  +LL   +E+ L I++++
Sbjct: 181 LARSVMLRYRQALGQIISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSIIQEH 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++ AMM  IR DL ALNI HD+F SE   +  +   IR  I +L   GY+Y+G LPPPK 
Sbjct: 241 AIDAMMATIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGTLPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K  +  +  R+Q LFRST VGDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY++
Sbjct: 301 KNIEDWE-PREQTLFRSTDVGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYIL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GYVKRLEAVA A+S  K ++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+E
Sbjct: 360 GADHTGYVKRLEAVAKAISGNKVKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RK    LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F   +
Sbjct: 420 VGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFLTEN 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                  +   +   D +E+ LI  L EYPR+IE A I +EP++LAFYLYDLAS FHGHW
Sbjct: 480 PSNSTM-IAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNFHGHW 538

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++  EM
Sbjct: 539 NKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587


>gi|163746495|ref|ZP_02153853.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380380|gb|EDQ04791.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 581

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/587 (46%), Positives = 388/587 (66%), Gaps = 9/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA+    +   L+++  +  +   +  D I  E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFAEIRHLIIATLEQMVAQDALPATLNFDPITAEPPRDPAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A+++ DP + S  +AG GFINL L+PS  + +   ++  G ++GR ++G 
Sbjct: 61  KPRDIAEALAAQLQNDPRITSAEVAGPGFINLRLAPSVWQNVARQVLSQGTDFGRAILGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GQRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A    +   P+G YPG YL  +G+ L+  Y  +L++ PE +WL  +++++  
Sbjct: 181 SVYLRYLEA-NGKEVAFPDGTYPGDYLIPLGQALSKMYGDKLVDQPESEWLDDIREFASD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL +L ++ D+F SE   +      I   I +L  +G +YEG+L PPK K  
Sbjct: 240 AMMNLIREDLASLGVEMDVFYSEKSLY--GTGQIEAAIASLEAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDGS+TYFA D+AY   K  R FD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTKHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVSRDFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+    +++ L +LV+LY++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGHVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  SI R+A++    + D  
Sbjct: 417 DVTRFVMLTRKNDAMLDFDFDKVLEQSRENPVFYVQYAHARVASILRKAQEAGVKVADAT 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   ++   +     +EL L+  LAE+PR++E A  + EP+++AFYLY+LAS FH  +  
Sbjct: 477 LRDADLTKLDH---DAELGLLRKLAEWPRLVETAARSNEPHRVAFYLYELASDFHSLYHL 533

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           GR    LR +Q  +   +  ++ L  AVA +I +GL I+GV    EM
Sbjct: 534 GRSEDGLRALQEGDAATSQAKIALSRAVAIVIAAGLGILGVTPAQEM 580


>gi|240140137|ref|YP_002964614.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010111|gb|ACS41337.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 585

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/587 (47%), Positives = 400/587 (68%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E++   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR     
Sbjct: 61  NPKALGEVLAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGR-GHMP 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL      +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477

Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W+ 
Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|163868520|ref|YP_001609729.1| arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083523|sp|A9IVK4|SYR_BART1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|161018176|emb|CAK01734.1| Arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 585

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/586 (51%), Positives = 422/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  ++  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++ +GL
Sbjct: 1   MNIFKNFEKKIKKSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A+ I+  +K D  ++++ +AG GFIN+ L+  + +  +  ++  G+ YGR  +G+
Sbjct: 61  SPRALADKIIELLKNDISIENIDVAGPGFINIKLTKLFWQDAVKYMLELGLSYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFAGYNITKEYYINDAGQQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++  +LL    ++ L IVK+ ++ 
Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQALAQEFGDQLLTMDRDEALSIVKERAIH 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL ALNI HDIF SE   +  +   IR+ I++L   GY+Y+G LPPPK +  
Sbjct: 241 TMMSMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNI 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +    Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWEPSE-QTLFRSTNVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S  KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG 
Sbjct: 360 HAGYVKRLEAMAKAISGNKAKLSVFLCQLVKLFRNGQPVRMSKRAGSFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA+++     F  
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSVFRQAQEVLHIESFS- 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       D +E+ LI  L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ G
Sbjct: 479 NDILITYLHRLIDDNEILLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASCFHTHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            EN  LRF+Q ++++L+  RL L+ AV +I++SGL+IIGVE+P EM
Sbjct: 539 SENLNLRFIQPHDKELSFARLGLIQAVINILSSGLSIIGVEAPIEM 584


>gi|254562575|ref|YP_003069670.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269853|emb|CAX25831.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 585

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/587 (47%), Positives = 399/587 (67%), Gaps = 5/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P   + ++ + +  G  +GR     
Sbjct: 61  NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQ-MP 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL      +PEG YPG YLK VG  LA+ +   LL+ PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREAL-GEAITIPEGLYPGDYLKPVGVRLAETHGRALLDRPEHEWLPQVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL A+ I+HD+F SE      +   + +++D L ++G VYEG LPPPK +  
Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRS+  GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D
Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++  P  DF  
Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477

Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ AS  H  W+ 
Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +PNEM
Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584


>gi|13471188|ref|NP_102757.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|23822203|sp|Q98LC0|SYR_RHILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14021932|dbj|BAB48543.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 585

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/586 (53%), Positives = 422/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FADF++R+   ++ +D K K      L RI +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MNIFADFTARVTKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +   ++ D DV +  +AG GF+NL L   + +  LS+++  G  YGR+ +G 
Sbjct: 61  NPRALAEKLALALRDDKDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGDGRNYGRSTVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG QI+ L  
Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGGQIDVLGR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL +   ++P G YPG YL  +G+ LA ++   LL  PE++ L IVKD ++ 
Sbjct: 181 SVILRYREALGDEIGEIPPGLYPGDYLVPLGQALAKEFGHGLLQMPEDEALAIVKDRAID 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  LN+ HD+F SE   H  +   IR  I++L  +G++Y+G LPPPK +  
Sbjct: 241 AMMAMIRDDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D
Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKRLEA+A A++  + ++ VLLC LV+LYRDG PI+MSKR+GDF+TLR VV+EVG 
Sbjct: 360 HGGYVKRLEALARAIAGDEVKLTVLLCNLVKLYRDGEPIRMSKRSGDFVTLREVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RK+   LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA +   + +FD 
Sbjct: 420 DAIRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFD- 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    S  D  E+ LI  LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G
Sbjct: 479 RKSLAAAAASLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP LRFV+ N+R+LT  RL LV AV+ ++ SGL +IG  +P EM
Sbjct: 539 TDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584


>gi|126462356|ref|YP_001043470.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166232830|sp|A3PK32|SYR_RHOS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126104020|gb|ABN76698.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 580

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/586 (46%), Positives = 384/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +  + +   L  +     +   + L  + +E PRD AHG +STNAAM+L++P G 
Sbjct: 1   MNLFTEIRTLVTAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  R+  DP + S  +AG GF+NL L P+  + ++++I+ +G  YGR+ IG 
Sbjct: 61  PPRAIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILQAGDTYGRSTIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++A +  + ++ EG YPG YL  VG+ L  KY   LL+  E+ WL  V++++ +
Sbjct: 181 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLKEVREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++IR+DL AL ++ D++ SE   +      I   +D L     +YEG+L PPK KT 
Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S  +  +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+
Sbjct: 357 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSKENPVFYVQYA AR  S+ R+A++    +D   
Sbjct: 417 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +     +E+ LI  LAE+PR++E A    EP+++AFYL++LAS  HG W+ G
Sbjct: 475 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   LRF+Q ++  ++  ++ L  AV  +I +GL I+GV    EM
Sbjct: 535 NDEAGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579


>gi|319404147|emb|CBI77740.1| Arginyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 588

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/589 (52%), Positives = 423/589 (71%), Gaps = 6/589 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F +++K  ++  D K K  + + L +IV + PRD  HG LSTNAAM+L++ +GL
Sbjct: 1   MNVFKNFENKIKKLIELSDIKGKNGEILDLSKIVADPPRDALHGDLSTNAAMVLAKSVGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           +P  +AE I+  +  D  V  +    IAG GFIN+    S+ +  L  ++  GI YG+  
Sbjct: 61  NPRALAEKIIKLLNSDQSVSDIDYINIAGPGFINIKFKQSFWQNALKLMIEKGISYGQIE 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI  
Sbjct: 121 IGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIKV 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA SV  RY++AL    S++PEG YPG YL  +G+ LA K+  +LL   +E+ L  ++++
Sbjct: 181 LARSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSTIQEH 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++ AMM +IR DL ALNI HD+F SE   +  +   IR  I +L   GY+Y+GILPPPK 
Sbjct: 241 AIDAMMAMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGILPPPKG 300

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K  +  +  R+Q LFRST +GDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY++
Sbjct: 301 KNVEDWE-PREQTLFRSTDIGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYIL 359

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GYVKRLEAVA A+S  KA++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+E
Sbjct: 360 GADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEE 419

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRFMML+RK    LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F   +
Sbjct: 420 VGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFRTEN 479

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                  +   +   D +E+ LI  L EYPR+IE A I +EP++LAFYLYDLAS FHGHW
Sbjct: 480 PSNSTM-IAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNFHGHW 538

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++  EM
Sbjct: 539 NKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587


>gi|146340981|ref|YP_001206029.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166232761|sp|A4YV78|SYR_BRASO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146193787|emb|CAL77804.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 598

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/590 (50%), Positives = 403/590 (68%), Gaps = 7/590 (1%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           YLFAD  +R+      +       + I   R+V+E PRD +HG ++TNAAM+L++     
Sbjct: 9   YLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAK 68

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I  R++ D  V  V +AG GFINL L PS   K L++I+  G  YGR     G
Sbjct: 69  PRDLAEQIAERLRADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPG 128

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+E+VSANPTGPMHVGHCR AV GD L+SL+ F+G +VTREYYINDAGAQ++ LA 
Sbjct: 129 APKVNVEYVSANPTGPMHVGHCRGAVFGDALSSLLQFAGRDVTREYYINDAGAQVDVLAR 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL  +   +PEG YPG YLK VG+ L  ++  +L   P+ +WLPIV+D ++ 
Sbjct: 189 SAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLPIVRDKAIA 248

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  I+DDL ALNI+HD+F SE     G  + + + ID L  +G VYEG LPPPK    
Sbjct: 249 MMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPV 308

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+QLLFR+T  GDDVDRPL+KSDGSYTYFA+D+A  + K+ERGF ++I V G+D
Sbjct: 309 EDWE-DREQLLFRATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGAD 367

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+KR++A   AV+  +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 368 HGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGR 427

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMML+RKN  +LDFD  KV EQSK+NPVFYVQY +AR  SIFR A++  P+L  + 
Sbjct: 428 DAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESLPELPEEE 487

Query: 480 FPRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             R         E   D++E  L+  LA YPR +E+A +A EP+++AFYLY+LAS FH  
Sbjct: 488 GARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHAL 547

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ GR+ P LRF+  ++ +LT  RL +V  V S++ SGL I+GV +P+ M
Sbjct: 548 WTRGRDLPYLRFIIDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAM 597


>gi|77463500|ref|YP_353004.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|109895030|sp|Q3J281|SYR_RHOS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77387918|gb|ABA79103.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 583

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/586 (46%), Positives = 385/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +  + +   L  +     +   + L  + +E PRD AHG +STNAAM+L++P G 
Sbjct: 4   MNLFTEIRTLVTAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 63

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P TIAE +  R+  DP + S  +AG GF+NL L P+  + ++++I+ +G  YGR+ IG 
Sbjct: 64  PPRTIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILQAGDTYGRSTIGA 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA 
Sbjct: 124 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++A +  + ++ EG YPG YL  VG+ L  KY   LL+  E+ WL  V++++ +
Sbjct: 184 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATE 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++IR+DL AL ++ D++ SE   +      I   +D L     +YEG+L PPK KT 
Sbjct: 243 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I + G+D
Sbjct: 301 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S  +  +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+
Sbjct: 360 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSKENPVFYVQYA AR  S+ R+A++    +D   
Sbjct: 420 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 477

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +     +E+ LI  LAE+PR++E A    EP+++AFYL++LAS  HG W+ G
Sbjct: 478 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 537

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   LRF+Q ++  ++  ++ L  AV  +I +GL I+GV    EM
Sbjct: 538 NDEAGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 582


>gi|49474356|ref|YP_032398.1| arginyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81646981|sp|Q6FZH0|SYR_BARQU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49239860|emb|CAF26254.1| Arginyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 585

 Score =  638 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/586 (51%), Positives = 423/586 (72%), Gaps = 3/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F +F  ++K  L+  D K K  + + L +I ++ PRD +HGHLSTNAAM+L++ +GL
Sbjct: 1   MNVFKNFEKKIKKSLELSDIKGKNGEDLNLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I+  +K D  +D + IA  GFIN+ L+ S+ +  + S++  G  YGR  +G+
Sbjct: 61  NPHALAEKIIELLKNDSSIDCIDIAAPGFINIKLTKSFWQDAIKSMLKKGTSYGRIPMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGPMHVGHCR AV GD L++L+ F GY +T+EYYINDAG QI  LA 
Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVFGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL    +++PEG YPG YL  +G+ LA ++S +LL   +++ L IVK+ ++ 
Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFSDQLLTIDKDEALSIVKERAIY 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL ALNI HDIF SE   +  +   IR+ I++L   GY+Y+G LPPPK + T
Sbjct: 241 AMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGELPPPKGQNT 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D
Sbjct: 301 EDWE-PREQTLFRSTDVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRLEA+A A+S   A+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG 
Sbjct: 360 HAGYVKRLEAMAKAISGNSAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++IF   +   
Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEIFRIENVS- 478

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       D +E+ LI  L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ G
Sbjct: 479 NDTMIAHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHAHWNKG 538

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +N  LRF+Q ++++L+  RL L+ A+ +I++SGL I+G+E+  EM
Sbjct: 539 SDNFDLRFIQPDDKELSFARLGLIQAIMNILSSGLAIVGIEAATEM 584


>gi|221639361|ref|YP_002525623.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782980|sp|B9KSX6|SYR_RHOSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221160142|gb|ACM01122.1| Arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 580

 Score =  638 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/586 (46%), Positives = 383/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +  + +   L  +     +   + L  + +E PRD AHG +STNAAM+L++P G 
Sbjct: 1   MNLFTEIRTLVTAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  R+  DP + S  +AG GF+NL L P+  + ++++I+ +G  YGR+ IG 
Sbjct: 61  PPRAIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILKAGDTYGRSTIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++A +  + ++ EG YPG YL  VG+ L  KY   LL+  E+ WL  V++++ +
Sbjct: 181 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++IR+DL AL ++ D++ SE   +      I   +D L     +YEG+L PPK KT 
Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S  +  +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+
Sbjct: 357 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSKENPVFYVQYA AR  S+ R+A++    +D   
Sbjct: 417 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +     +E+ LI  LAE+PR++E A    EP+++AFYL++LAS  HG W+ G
Sbjct: 475 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   LRF+Q  +  ++  ++ L  AV  +I +GL I+GV    EM
Sbjct: 535 NDEAGLRFLQ-EDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579


>gi|144899909|emb|CAM76773.1| Arginyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 580

 Score =  638 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/585 (47%), Positives = 381/585 (65%), Gaps = 6/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF  F   +   L  +D    ++     ++  E PR+ AHG ++TNAAM+LS+  G  
Sbjct: 1   MNLFKYFRQEIIAALSRLDLPSGLDT---SKVTAEPPREEAHGDVATNAAMVLSKAAGQK 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE + A+++  P V +V IAG GFINL L  S+  + L+ ++ +G  YG + +G  
Sbjct: 58  PRDLAEALAAQLRAHPAVAAVEIAGPGFINLRLVDSFWAERLAEVLQAGAAYGDSDMGGK 117

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + +N+E+VSANPTGPMH+GH R AV+GD LASL+A +GY VTREYYINDAGAQ++ LA S
Sbjct: 118 SPINVEYVSANPTGPMHIGHARGAVIGDALASLLAKAGYAVTREYYINDAGAQVDVLARS 177

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  RY++AL     ++PEG YPG YL+  GK LA  +  +  N PE +WL   + ++V A
Sbjct: 178 IHLRYREALGEEIGEIPEGLYPGDYLQPAGKTLAAIHGDDFKNAPESEWLARFRLFAVDA 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IRDDL AL ++HD+F SE      +   +   +D LA  G VYEG+L PPK K   
Sbjct: 238 MMDMIRDDLAALGVKHDVFTSERGLV--ESGKVDAALDFLAGLGQVYEGVLEPPKGKVLD 295

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +  R Q LFR+T  GDDVDRPL KSDGS+TYFA+D+AY   KY RGF  MI + G+DH
Sbjct: 296 DWE-PRPQTLFRATAFGDDVDRPLKKSDGSWTYFASDIAYHLDKYRRGFPAMIDIWGADH 354

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKR++A   AVSE    ++V LC++V L + G P KMSKRAG F+TLR +VD+VG D
Sbjct: 355 GGYVKRMQAAVKAVSEGGGDLDVKLCQMVNLMKGGQPFKMSKRAGTFVTLRDLVDQVGKD 414

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            VRF+ML RKN   LDFD  KV EQS++NPVFYVQYA+ARC S+ R      P  D    
Sbjct: 415 VVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVLRHGVQALPGADLSAA 474

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                P     D +EL +I  LA +PR++E+A  A EP+++AFYL D+A+ FHG W+ G+
Sbjct: 475 ALAAGPLARLTDPAELAVIKLLAGWPRLVESAAEAHEPHRVAFYLNDVAAAFHGLWNKGK 534

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +LRF+   + +L++ R+ LV AVA +I SGL + GVE   EM
Sbjct: 535 DDTQLRFLIEGDAELSLARMGLVRAVADVIASGLAVFGVEPVEEM 579


>gi|332558380|ref|ZP_08412702.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276092|gb|EGJ21407.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 580

 Score =  638 bits (1645), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/586 (46%), Positives = 385/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +  + +   L  +     +   + L  + +E PRD AHG +STNAAM+L++P G 
Sbjct: 1   MNLFTEIRTLVIAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P TIAE +  R+  DP + S  +AG GF+NL L P+  + ++++I+ +G  YGR+ IG 
Sbjct: 61  PPRTIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILQAGDTYGRSTIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++A +  + ++ EG YPG YL  VG+ L  KY   LL+  E+ WL  V++++ +
Sbjct: 181 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++IR+DL AL ++ D++ SE   +      I   +D L     +YEG+L PPK KT 
Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S  +  +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+
Sbjct: 357 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSKENPVFYVQYA AR  S+ R+A++    +D   
Sbjct: 417 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +     +E+ LI  LAE+PR++E A    EP+++AFYL++LAS  HG W+ G
Sbjct: 475 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   LRF+Q ++  ++  ++ L  AV  +I +GL I+GV    EM
Sbjct: 535 NDEAGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579


>gi|159044277|ref|YP_001533071.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912037|gb|ABV93470.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 581

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 264/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   L E+  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRAGVLAALTEMQAEGTLPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP V S  +AG GF+NL L+P+  + ++ +++ +G  +GR+ +G+
Sbjct: 61  KPRDIAEALAGKLAADPRVASAEVAGPGFLNLRLAPTLWQDVVRAVLTTGTGFGRSSMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GRRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L DK     ++  E+ WL  V+D++  
Sbjct: 181 SVYLRYLEA-HGQQVAFEDGTYPGDYLIAVGEALKDKVGDAFVDKGEQFWLAEVRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL +L ++ D F SE   +      I   I +L  +G +Y G L PPK K  
Sbjct: 240 AMMDLIRADLASLGVKMDRFFSEKSLY--GTGRIEAAIADLDAKGLIYRGTLEPPKGKVP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPIKKSDGSWTYFAPDIAYHYDKVNRGYDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LVRL+++G P KMSKRAG F+TL  VV++VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLTQLVRLFKNGEPFKMSKRAGTFVTLSDVVEQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +    +D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVCSVLRKAAEAGVPVDDAN 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  +      D +EL+L   LAE+PR++E A    EP++++F LYD+A+  H  W+ G
Sbjct: 477 LAQADLS--GMTDPAELKLARALAEWPRLVEIAARTNEPHRISFALYDIAADLHALWNKG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++P LRF+Q  +   T  ++ LV A A +I++GL I+GV    EM
Sbjct: 535 NDDPSLRFLQEGDSAATQAKIALVRACAVVISTGLGILGVSPVEEM 580


>gi|163735841|ref|ZP_02143270.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161390927|gb|EDQ15267.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 580

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 268/586 (45%), Positives = 389/586 (66%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA+  + +   L ++     +   + +  + +E PRD +HG ++TNAAM+L++P G 
Sbjct: 1   MNLFAEMRALVLACLDQMVTAGHLPADLNMANVTVEPPRDASHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A +  DP + S  +AG GF+NL ++P   R +L S++ +G ++GR  +G 
Sbjct: 61  KPREIAEALAACLVADPRITSAEVAGPGFLNLRIAPDAWRAVLLSVLGAGTDFGRATLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++G++VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   P+G YPG YL  VG++L D      +  PEE WL  ++ ++  
Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIPVGQQLKDLKGDSYVGQPEEAWLQDIRTFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DLK+L ++ D+F SE   +      I   I++L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIRADLKSLGVEMDVFYSEKSLY--GTGRIEAAIEDLKSKGLIYDGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDGS+TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVSRGYDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A+     +D D 
Sbjct: 417 DVARFVMLTRKNDAMLDFDFDKVMEQSRENPVFYVQYAHARVASVMRKAEAAGIAVDMDT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        +EL LI  L+E+PR++E A  + EP+++AFYLY+L+ VFH  W+ G
Sbjct: 477 LKAADLSL--LDHEAELGLIAKLSEWPRLVETAARSNEPHRVAFYLYELSGVFHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRFVQ ++ K+T  ++ L  A + +I +GL I+GV    EM
Sbjct: 535 NDVPELRFVQ-DDPKVTQAKIALARACSVVIAAGLGILGVTPAQEM 579


>gi|154253462|ref|YP_001414286.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769666|sp|A7HXJ6|SYR_PARL1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|154157412|gb|ABS64629.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 583

 Score =  636 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 276/586 (47%), Positives = 379/586 (64%), Gaps = 5/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F  R++  L+ ++ +  +   + L R+ +E PRD +HG LSTNAAM+L++P G+
Sbjct: 1   MNIFRFFEGRVEAALRSLEEEGVLPSGLDLTRVAVEPPRDPSHGDLSTNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +  ++  +  V  V +AG GFINL L+P++ +  +  I+ SG  YG + +G 
Sbjct: 61  KPRELAEQLAVKLGGEEAVTEVDVAGPGFINLRLNPAFWQARIPEILRSGPAYGASDVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMHVGH R AV GD L +L+   GY V REYYINDAG QI  LA 
Sbjct: 121 GEAVNVEYVSANPTGPMHVGHVRGAVFGDALCNLLEKVGYRVCREYYINDAGGQIEVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +   +PEG YPG YLK VG+ L   +   LL   E + L IV++ +V+
Sbjct: 181 SAFLRYREALGEDIGQIPEGLYPGGYLKPVGQALVAAHGRSLLEKDEPEALSIVREAAVE 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L I H+ F SE   HR     +   +  L  +G +Y G L PPK +  
Sbjct: 241 AMMELIRGDLGVLGIVHETFFSELALHR--SGFVEQTLKVLEDKGLIYIGELEPPKGEVP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LFRST  GDD DR L KSDGS+TYFA D+AY   KY RG+  +I V G+D
Sbjct: 299 DDWEA-RPQTLFRSTEFGDDTDRALKKSDGSWTYFAPDIAYHLDKYNRGYRTLIDVWGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           HSGY+KR+ A  A V++  A+ +V +C+LVRL+R+G P+KMSKR+GDF+TLR VVDEVG 
Sbjct: 358 HSGYIKRMRAAIAGVTDGNAEFDVKICQLVRLFRNGEPVKMSKRSGDFVTLREVVDEVGK 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRFMML RKN   LDFDF KV EQS++NPVFYVQYA AR  S+ R   +     D   
Sbjct: 418 DVVRFMMLTRKNDAPLDFDFAKVMEQSRDNPVFYVQYANARIHSVLRNVAEEGT-YDLSD 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +E+ L+  +A +PR++E A +A EP+++AFYL DLA+ FHG W+ G
Sbjct: 477 GALANADFTLLTDEAEMALVRLMAGFPRLVEQAALAHEPHRIAFYLDDLAAAFHGLWNKG 536

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++  LRF++A++R +T+ RL L+ + A +I +GL I+GVE   EM
Sbjct: 537 KDDHSLRFIRADHRDVTLARLALIRSAAYVIAAGLAILGVEPTEEM 582


>gi|182679625|ref|YP_001833771.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|254782941|sp|B2IJG9|SYR_BEII9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|182635508|gb|ACB96282.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 590

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 288/590 (48%), Positives = 392/590 (66%), Gaps = 6/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLG- 58
           M +F +F +R+   L+ I    ++ + + L R V+E PR+ AHG L+ NAAM+ ++    
Sbjct: 1   MNIFTEFHARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKP 60

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I   +  D DV    +AG GFIN+ L P +  ++L + +  G ++GR  
Sbjct: 61  AFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIRLKPEFFGRLLGAALEQGSDFGRPA 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G+ VTREYYINDAGAQ++ 
Sbjct: 121 TAAQEKINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDV 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA S   RY++AL      +PEG YPG YLK VG  LA  +         E+WL I +  
Sbjct: 181 LARSAHLRYREALGETIGAIPEGLYPGDYLKSVGASLAQAHGDTYRGSNGEEWLEIFRLA 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPK 295
           ++  MM +IRDDL ALNI H++F SE    R +    +   I  L  +G VYEG LPPPK
Sbjct: 241 AIDGMMAMIRDDLAALNITHEVFFSERSLTRSEDGDQVAAAIAFLRDRGLVYEGRLPPPK 300

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  + DR+Q+LF+ST  GDDVDRPL KSDG+YTYFA+D+AY K K +RG+  +I V
Sbjct: 301 GQAIEDWE-DREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDV 359

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYVKR+ A   A+SE +  ++V LC+LV+L R G P+KMSKRAGDF+TLR VVD
Sbjct: 360 WGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRAGDFVTLREVVD 419

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+VRFMML+RKN  +L+FD  KV EQSK+NPVFYVQYA+AR +S+FRQA  + PDL
Sbjct: 420 EVGVDAVRFMMLFRKNDAVLEFDLAKVIEQSKDNPVFYVQYAHARVKSVFRQAATLLPDL 479

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D  L            D  E +LI  +A++PRV+E A +A EP+++AFYL+DLAS  H H
Sbjct: 480 DCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAH 539

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G++ P LRF+    R LT+ RL LVH +A ++ SGL+++GV +P+EM
Sbjct: 540 WTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSEM 589


>gi|170749174|ref|YP_001755434.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|254782974|sp|B1M335|SYR_METRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170655696|gb|ACB24751.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 583

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 280/587 (47%), Positives = 398/587 (67%), Gaps = 7/587 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R+++ ++ +     + + + L R+V+E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFEARVRDAVEALTRAGHLPEGLDLGRVVVEPPRDASHGDLATNAALVLAKEARA 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E + A ++ DP +    +AG GFINL L P+    ++   + +   +GR  +  
Sbjct: 61  NPKALGESLAAELRADPRIVEASVAGPGFINLRLDPAIFHAVVRDALEAPEAFGRARL-P 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  +N+E+VSANPTGPMHVGH R AV GD L +L+  +G +VTREYYINDAG Q++ LA 
Sbjct: 120 GGPINVEYVSANPTGPMHVGHGRGAVFGDALCNLLVAAGRQVTREYYINDAGVQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL      + EG YPG YLK VG  LA+ +   LL+ PE +WLP V++ ++ 
Sbjct: 180 SAFQRYREAL-GEPFAIAEGLYPGDYLKPVGARLAETHGRALLDKPEAEWLPTVRETALG 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL A+ I+HD+F SE      +   ++ ++  L  +G VYEG LPPPK +  
Sbjct: 239 MMMDMIRADLAAIGIRHDVFFSERTLQ--ESGAVKALLAELRAKGLVYEGRLPPPKGQLP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFR+   GDD DRPLLKSDGSYTYFA+D+AY + KY  G   +I V+G+D
Sbjct: 297 EDWE-DREQTLFRTKEFGDDSDRPLLKSDGSYTYFASDIAYHRAKYLAGATELIDVLGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   AVS+ KA ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG 
Sbjct: 356 HGGYVKRMQAAVKAVSDGKATLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQYA+AR RS+ RQA++ FPD D  +
Sbjct: 416 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARVRSVQRQAREAFPDADLSV 475

Query: 480 FPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D  E++++  +A+YPRV+E+A +A EP+++AF+LY+LAS  H  W+ 
Sbjct: 476 AALAREADLAVLSDPGEIEMMRLIAQYPRVLESAALAHEPHRIAFHLYELASALHSFWNK 535

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P+LRFV A +RK T  RL LV A+ S + +GL I+GV +P+EM
Sbjct: 536 GKDLPQLRFVNATDRKSTWARLALVEALRSTLAAGLAILGVTAPDEM 582


>gi|260575254|ref|ZP_05843254.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022514|gb|EEW25810.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 580

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 271/586 (46%), Positives = 378/586 (64%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  S +   +  +    ++ + + L  + +E PRD  HG ++TNAAM+L++P GL
Sbjct: 1   MNLFSDIRSLVIASIDAMVAAGELPQGLDLAAVAVEPPRDAGHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP +  V +AG GF+NL L P+  + ++ +++  G +YGR  +G 
Sbjct: 61  APRAIAESLAARLARDPRIAGVEVAGPGFLNLRLQPAVWQGLVGAVLRQGADYGRATLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+EFVSANPTGPMHVGH R AVVGD LA L+AF+G+ VTREYYIND G Q++ LA 
Sbjct: 121 GRRVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAFAGWNVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A      ++ EG YPG YL  VG+ L  KY + LL  PE  WL  ++ +S  
Sbjct: 181 SAYERYREAC-GLSPEIREGLYPGDYLIPVGEALKAKYGTSLLEQPESVWLADLRTFSTD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL AL +  D++ SE   +      I   I+ L   G +YEG L PPK K  
Sbjct: 240 MMMTMIRADLAALGVTMDVYSSEKALY--GTGRIEAAIETLRGMGLIYEGTLEPPKGKEP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R Q LFRST  GDDVDRP++KSDGS+TYFA D+AY   K +RGFD +I + G+D
Sbjct: 298 EDWE-PRLQTLFRSTAHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVQRGFDELIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S  +  +++ L +LV+L+++G P KMSKRAG F+TLR V+D VG+
Sbjct: 357 HGGYVKRMKAAVSALSNGRVPLDIKLVQLVKLWKNGEPFKMSKRAGTFVTLRDVIDLVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A++    +D   
Sbjct: 417 DVTRFVMLTRKNDAALDFDFDKVLEQSKDNPVFYVQYANARINSVLRRAREAGVAVDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        +E+ L   +AE+PRV+E A    EP+++AFYLY+LAS  HG W+ G
Sbjct: 477 LAAADLG--KLDHEAEIGLAKKIAEWPRVVEIAARGNEPHRVAFYLYELASDLHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P+LRFVQ ++  +T  ++ L  A   +I+SGL I+GV    EM
Sbjct: 535 NDAPQLRFVQ-DDSAITQAKIALARATGVVISSGLAILGVTPVEEM 579


>gi|254510090|ref|ZP_05122157.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533801|gb|EEE36789.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 581

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 264/586 (45%), Positives = 388/586 (66%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF++    + + L ++     + + +  D + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFSEIRGLVLDALAQMQSDGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +  ++  D  + S  +AG GF+NL L+PS  + +L++++  G +YGR+ +G+
Sbjct: 61  KPRDIADALAGKLAADDRITSAEVAGPGFLNLRLAPSVWQGVLTAVLAQGTDYGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A      ++ EG YPG YL  +G+ L  KY   L++ PE +WL  +++++  
Sbjct: 181 SAYERYREA-NGLSPEIAEGLYPGDYLIPIGEALKAKYGDSLIDKPESEWLEDLRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DLKAL ++ D+F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAALQSLTDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVSLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +     D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIAADDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   +    SEL +   LAE+PR++E A    EP+++AFYLY+LA  FH  W+ G
Sbjct: 477 LAGADLG--TIDHASELTVAKKLAEWPRLVEIAARTNEPHRVAFYLYELAGDFHALWNKG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            E  +LRF+Q  +   +  ++ L  +V+ +I++GL I+GV    EM
Sbjct: 535 NEETQLRFIQDGDVATSQSKIALARSVSVVISAGLGILGVTPAQEM 580


>gi|170740711|ref|YP_001769366.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|254782975|sp|B0UI81|SYR_METS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|168194985|gb|ACA16932.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 586

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 297/587 (50%), Positives = 397/587 (67%), Gaps = 4/587 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F  R+   L  +    ++ + + L R+V+E PRD  HG L+TNAA++L++    
Sbjct: 1   MNIFAAFEERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEART 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AEL+ A ++ DP V    +AG GF+NL L+P    +++ + + SG  +GR     
Sbjct: 61  NPKALAELLAAELRQDPRVTEASVAGPGFLNLRLAPEVFAEVVRAALASGEAFGRGARRP 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G   N+E+VSANPTGPMHVGH R AV GD LA+L+A SG EV REYYINDAGAQ++ LA 
Sbjct: 121 GLV-NVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL +    +PEG YPG YLK VG+ LA+ +   LL  PE  WLP+V+D+++ 
Sbjct: 180 SAYLRYREALGDAIGAIPEGLYPGDYLKPVGRRLAETHGRALLREPESAWLPVVRDFAIA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKT 298
           AMM +IRDDL AL I+HD+F SE     G        +I  L  +G VY G LPPPK + 
Sbjct: 240 AMMDLIRDDLAALGIRHDVFFSERTLQGGGDGGAVGALIAELREKGLVYVGRLPPPKGQL 299

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  + DR Q LFRST  GDD+DRPLLKSDG+YTYFA+D+AY   K  RG  ++I V+G+
Sbjct: 300 PEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGA 358

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKR++A   AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG
Sbjct: 359 DHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVIDEVG 418

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML+RKN   LDFD  KV EQSK+NPVFYVQYA+AR  S+FRQA++ FP  D  
Sbjct: 419 RDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPGEDLS 478

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        D+ E  ++  +A+YPRVIE A  A EP++LAFYLY+LAS FH  W+ 
Sbjct: 479 PQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFWNK 538

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G++ P+LRFV   +RK T+ RL LV A+  ++ SGL I+GV +P+EM
Sbjct: 539 GKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDEM 585


>gi|84500943|ref|ZP_00999178.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391010|gb|EAQ03428.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 581

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 271/585 (46%), Positives = 377/585 (64%), Gaps = 7/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +  +  +   +    + +E PRD  HG ++TNAAM+L++P GL
Sbjct: 1   MNLFADIRATVLDSLAAMQQEGDLPGGLDFANVTVEPPRDPGHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  R+  D  + S  +AG GF+NL L P+    I+ +++ SG +YGR+ +G+
Sbjct: 61  KPRDIAEALADRLAADDRITSAEVAGPGFLNLRLDPAVWADIVRTVLQSGPQYGRSAMGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A + ++     G YPG YL  VG+ L  K     ++ PEE WL  V++ + +
Sbjct: 181 SVYLRYLEA-HGHEVTFEGGTYPGDYLISVGEALKSKVGDAYVDQPEEVWLDDVREMATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L +Q D F SE   +      I   ID+L+ +G +Y+G L PPK K  
Sbjct: 240 AMMELIRVDLGLLGVQMDHFFSEKALY--GTGRIEAAIDSLSDKGLIYQGTLEPPKGKVP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTEHGDDVDRPIRKSDGSWTYFAPDIAYHYDKISRGYDLLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG P KMSKRAG FITLR VV+EVG 
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPVDIKLCQLVKLFKDGEPFKMSKRAGTFITLRDVVEEVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +     D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARIASVLRKAGEAGIAHDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      D +E  +   L E+PR++E A    EP+++AFYLY+LA   H  W+ G
Sbjct: 477 LAAADLS--GMTDEAEQSVAKKLTEWPRLVEIAARTNEPHRVAFYLYELAGDLHTLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            + P LRF+   +  L+  +L L  AVA +I++GL I+GV    E
Sbjct: 535 NDKPELRFLHEGDAALSQSKLALARAVAVVISAGLAILGVTPAEE 579


>gi|296447938|ref|ZP_06889847.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296254575|gb|EFH01693.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 592

 Score =  631 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 292/593 (49%), Positives = 398/593 (67%), Gaps = 10/593 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F+DF + +   L+ I    ++ + +   R V+E P+D AHG L+TN AM+ ++    
Sbjct: 1   MNIFSDFHAIIAAILERIKASGRLPETLDASRFVVEPPKDAAHGDLATNVAMVFAKEAKP 60

Query: 60  ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I A +  +P+V    +AG GFIN+ L PS    +L S++  G  YGR  
Sbjct: 61  HFPNPRQLAVEIAAALVNEPNVAEAEVAGPGFINIRLKPSVYADVLRSVLAEGDAYGRPH 120

Query: 117 IGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
                  ++N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G +VTREYYINDAGAQ+
Sbjct: 121 GRGALAGRINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGADVTREYYINDAGAQV 180

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           + LA S F RY++AL     ++PEG YPG YLK  G+ +A  +   LL+ PE +WL  VK
Sbjct: 181 DVLARSAFLRYREAL-GETIEIPEGLYPGDYLKVAGEAIAKAHGRALLDKPEAEWLEPVK 239

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGILP 292
             ++ AMM++IRDDL AL+I+H++F SE   H      S I   ID L  +G VY+G LP
Sbjct: 240 RAAIDAMMEMIRDDLAALDIRHEVFFSERTLHAKVNGVSQIDKEIDELRARGLVYDGRLP 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
           PPK +     + DR+Q LFRST  GDD+DRPL KSDG+ TYFAAD+AY K K +RGF  +
Sbjct: 300 PPKGQLPDDWE-DREQTLFRSTDFGDDIDRPLKKSDGANTYFAADIAYHKSKIDRGFTTL 358

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + V G+DH GYVKR+ A  AA+S  K +++V LC+LV+L R+G P+KMSKR+GDF+TLR 
Sbjct: 359 VDVWGADHGGYVKRMAAAVAALSAGKVELDVKLCQLVKLMRNGEPVKMSKRSGDFVTLRE 418

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           VVDEVG D+VRFMML+RKN   L+FD  KV EQSK+NPVFYVQYA+AR +S  RQA   F
Sbjct: 419 VVDEVGVDAVRFMMLYRKNDAPLEFDLAKVIEQSKDNPVFYVQYAHARAKSAVRQALAAF 478

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           PDLD        +P E   D  E+ L   +A +PR++E A  A EP+++AFYL+DLASVF
Sbjct: 479 PDLDVSPAALASVPLELLTDEGEIALAKAIAHFPRLVEQAAAAHEPHRVAFYLHDLASVF 538

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H HW+ G++ P+LRFV A++R  T  R+ LV ++  ++ SG  ++GV +P+EM
Sbjct: 539 HAHWNKGKDRPQLRFVNADDRNSTCARIALVASLTCVLASGSRLLGVSAPDEM 591


>gi|146276951|ref|YP_001167110.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166232831|sp|A4WQZ1|SYR_RHOS5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145555192|gb|ABP69805.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 580

 Score =  631 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 268/586 (45%), Positives = 385/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +  S +   L  +    ++   + L  + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFTEIRSLVTAELGAMAEAGELPAGLDLSAVAVEPPRDPAHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  R+  DP + S  +AG GF+NL L P+  + +++ ++ +G  YGR+ IG 
Sbjct: 61  PPRAIAEALATRLAADPRILSAEVAGPGFLNLRLRPAVWQGLVARVLQAGDAYGRSTIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+EFVSANPTGPMHVGH R AVVGD LA L+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GQRVNVEFVSANPTGPMHVGHVRGAVVGDALARLLVFAGWDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A +  + ++ EG YPG YL  VG+ L  KY   LL+  E  WL  V++++ +
Sbjct: 181 SAYERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEHCWLTDVREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++IR+DL AL ++ D++ SE   +      I   +  L   G +YEG+L PPK KT 
Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALQRLQDMGLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+ +  +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+
Sbjct: 357 HGGYVKRMKAAVAALSDGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSKENPVFYVQYA AR  S+ R+A++    +D   
Sbjct: 417 DVTRFVMLTRKNDAALDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVAD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +     +E+ LI  LAE+PR++E A    EP+++AFYL++L+S  HG W+ G
Sbjct: 475 AALACADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRIAFYLHELSSDLHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++  ++  ++ L  AV  +I +GL I+GV    EM
Sbjct: 535 NDEPGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579


>gi|188582826|ref|YP_001926271.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179346324|gb|ACB81736.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 594

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 285/596 (47%), Positives = 400/596 (67%), Gaps = 14/596 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+V+E PRD AHG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDPAHGDLATNAALVLAKDAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP +    +AG GFINL L+P    +++ + +  G  +GR     
Sbjct: 61  NPKALGEALAEALRSDPRIVEASVAGPGFINLRLAPEVFHEVIRAALHDGEAFGRGN-MP 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA 
Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL      +PEG YPG YLK VG+ L   +   LL  PE +WLP V+ +++ 
Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGEGLKQAHGDALLGKPEHEWLPTVRRFAID 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---------SPIRDIIDNLARQGYVYEGI 290
           AMM +IR+DL A+ I+HD+F SE     G           + + +++D L  +G VYEG 
Sbjct: 239 AMMDMIREDLAAIGIRHDVFFSEATLQGGSGGQGGGQGGSNRVAELLDALRAKGLVYEGR 298

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           LPPPK +  +  + DR+Q LFRST  GDDVDRPLLKSDGSYTYFA+D+AY + K+ RG  
Sbjct: 299 LPPPKGQLPEDWE-DREQTLFRSTQFGDDVDRPLLKSDGSYTYFASDIAYHRDKWLRGAS 357

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I V+G+DH GYVKR++A   AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TL
Sbjct: 358 ELIDVLGADHGGYVKRMQAAVKAVSDGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTL 417

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R V+DEVG D++RFMML+RKN   LDFD  KV EQSK+NPVFYVQY +AR  S+ RQA++
Sbjct: 418 RDVIDEVGRDAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQARE 477

Query: 471 IFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             P  DF         + S   D  E++++  +A+YPRV+E+A  A EP+++AFYLY+ A
Sbjct: 478 ALPSEDFSREGLLADAELSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETA 537

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S  H  W+ G++ P+LR V   +R  T  RL LV A+  ++ SGL ++GV +P+EM
Sbjct: 538 SSLHSFWNKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPDEM 593


>gi|84516347|ref|ZP_01003707.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510043|gb|EAQ06500.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 598

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 275/586 (46%), Positives = 384/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD   R+   L ++     + + + LD + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 19  MNLFADVRGRVLACLDQMVADGALPQGLALDAVAVEPPRDAAHGDMATNAAMVLAKPAGL 78

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ +  ++  DP + S  +AG GF+N++L P+  + I+ S +     +GR+ +G+
Sbjct: 79  NPRAIADALAVKLAADPLIASADVAGPGFLNMHLVPAAWQGIVKSALSDK-GFGRSRLGQ 137

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++ +E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA 
Sbjct: 138 GQRMLVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 197

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A ++   D PEG YPG YL  VG+ L +K  SE L+  E+ WL  V+ ++  
Sbjct: 198 SVYLRYVEA-HDLTVDWPEGSYPGDYLIPVGEALKEKVGSEYLDQSEDVWLDDVRLFATD 256

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L I+ D F SE   +      I   I  L  +G +Y+G+L  PK KT 
Sbjct: 257 AMMALIRADLAQLGIEMDSFYSEKSLY--GSGLIEKAIAELDAKGLIYQGVLEAPKGKTP 314

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K +RGFD +I V G+D
Sbjct: 315 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGAWTYFAPDIAYHYDKVQRGFDALIDVFGAD 373

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+ K  +++ L +LV+LY++G P KMSKRAG FITLR VVDEVG 
Sbjct: 374 HGGYVKRMKAAVAALSDGKVPLDIKLTQLVKLYQNGAPFKMSKRAGTFITLRDVVDEVGP 433

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR  S+ R+A+D    +D   
Sbjct: 434 DVTRFHMLTRKNDAPLDFDFAKVLEQSKDNPVFYVQYAHARVNSVLRKAQDAGVAVD--D 491

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        +EL +   +AE+PR++E A    EP+++AFYLYDLAS FH  W+ G
Sbjct: 492 ATLAAVDLSGLTHEAELAVARKIAEWPRLVEIAAKGHEPHRIAFYLYDLASDFHALWNRG 551

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  +   T  ++ L+ AVA +I+ GL I+GV    EM
Sbjct: 552 NDDASLRFLQMGDSDTTQAKIALIRAVAIVISHGLGILGVTPAEEM 597


>gi|288960182|ref|YP_003450522.1| arginyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288912490|dbj|BAI73978.1| arginyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 586

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 273/586 (46%), Positives = 381/586 (65%), Gaps = 5/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F + ++  L+E+  +  +   +   R+ +E PR+ +HG LSTNAAMIL++P  +
Sbjct: 1   MNIFKAFETDIRKLLEELAAEGAIPAGLDGSRLTVEPPREASHGDLSTNAAMILAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AEL+VA++K   DV SV IAG GF+NL L P   R  +  ++ +G  +G + +G 
Sbjct: 61  APRALAELLVAKLKGRADVASVEIAGPGFVNLRLMPDVWRDRIRDVLTAGTAFGDSELGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T VN+E+VSANPTGP+H  H R AV GD LASL+  +GY VTREYYINDAGAQ++ LA 
Sbjct: 121 KTPVNVEYVSANPTGPLHAAHGRGAVFGDALASLLRKAGYAVTREYYINDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL     ++P G YPG YLK VG+ LA++  +  +   E +WLP  +++++ 
Sbjct: 181 STFIRYREALGEAVGEIPAGLYPGEYLKEVGQALAERDGNRWVGTDEAEWLPACREFAIA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +M  I++DL  L I  D++ SE          +   +  L  +G +Y G+L PPK K  
Sbjct: 241 MIMGWIKEDLGVLGITMDVYSSERALVA--AGAVNTALAALEERGLIYTGVLEPPKGKKP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF+S+  GDDVDRPL KSDGS+TYFA D+AY   KY RG  ++I V+G+D
Sbjct: 299 DDWE-PRPQTLFKSSEFGDDVDRPLKKSDGSFTYFANDIAYHYDKYRRGAASLIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   A+S   A+++V LC+LV L +DG P+KMSKRAG F+TLR V+D+VG 
Sbjct: 358 HGGYVKRMQAATRAISGGAAELDVKLCQLVHLMQDGQPVKMSKRAGTFVTLRDVIDQVGK 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF+ML R+N + LDFDF KV EQSK+NPVFYVQYA+ARCRS+ R A    P LD   
Sbjct: 418 DVVRFIMLTRRNDQTLDFDFAKVTEQSKDNPVFYVQYAHARCRSVLRHAATALPQLDQTP 477

Query: 480 FPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                    +  D   E+ L   +A +PR++E A  A EP+++AF+LYDLAS FH  W+ 
Sbjct: 478 ASLAASANLARLDAEEEMALAKRMATWPRIVEAAAEAHEPHRIAFFLYDLASDFHALWNR 537

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           GR++  LRF+   + +LT  RL L+ AVA++I SGL ++GVE   E
Sbjct: 538 GRDDASLRFLIEGDAELTTARLALIAAVATVIASGLAVMGVEPVEE 583


>gi|83952167|ref|ZP_00960899.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837173|gb|EAP76470.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 581

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 266/586 (45%), Positives = 377/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +    +   L+ +     +   + L  + +E PRD  HG ++TNAAM+L++P GL
Sbjct: 1   MNLFTEIRGTVIAALEAMMDADTLPAGLDLSNVAVEPPRDPLHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP + S  +AG GF+NL L+P    ++L +++ +G ++GR+ +G+
Sbjct: 61  KPRDIAEDLAARLADDPRIASAEVAGPGFLNLRLAPGQWHEVLRAVLAAGPDFGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+G+EVTREYYIND GAQ++ LA 
Sbjct: 121 GRKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFTGHEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  +     +  PEE WL  V++++ +
Sbjct: 181 SVYLRYLEA-HGQEVAFEDGTYPGDYLIPVGEALKSEVGDAYVGQPEEVWLEKVREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DLK+L ++ D F SE   +      I   +  L  +G +YEG+L PPK K  
Sbjct: 240 KMMGLIREDLKSLGVEMDEFYSEKSLY--GTGRIEAALAELESKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+LY++G P KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDMVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +     D   
Sbjct: 417 DVTRFHMLTRKNDAPLDFDFDKVVEQSKDNPVFYVQYANARVSSVLRKAAEAGIAADDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  +        +EL L   +AE+PR++E A    EP+++AFYLYDLAS  H  W+ G
Sbjct: 477 LAKADLS--ILSHEAELTLARKIAEWPRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q  +   +  ++ L  A   +I++GL I+GV    EM
Sbjct: 535 HDEPGLRFLQEGDAATSQAKIALARAATVVISAGLGILGVTPVEEM 580


>gi|85703270|ref|ZP_01034374.1| arginyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85672198|gb|EAQ27055.1| arginyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 581

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 266/586 (45%), Positives = 379/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   L  +    ++ + + L  + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFTDMRALVVETLAAMQTGGQLPEGLDLANVTVEPPRDAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP ++ V +AG GF+NL LSP   + +  + +  G+ +GR+ +G+
Sbjct: 61  KPREIAEALAARLGDDPRIEHVEVAGPGFLNLQLSPLLWQNVARAALQQGVTFGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+EFVSANPTGP+HVGH R AV GD LASL+ F GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GRRVNVEFVSANPTGPLHVGHTRGAVFGDALASLLDFVGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L  +     +  PE+ WL  ++D++  
Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKAEVGDVYVGQPEDVWLEPIRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL AL ++ D+F SE   +      I   I++L  +G +Y G+L PPK K  
Sbjct: 240 RMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S  +  +++ LC+LV+L+++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +    +D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGMAVDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  +        +EL +   +AE+PR++E A    EP+++AFYLYDLAS  H  W+ G
Sbjct: 477 LAQADLS--GLTHEAELNVARKIAEWPRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  +   +  ++ L  AV  +I++GL I+GV    EM
Sbjct: 535 NDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580


>gi|163739603|ref|ZP_02147012.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161387062|gb|EDQ11422.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 581

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 263/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVLDCLTAMVDEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +  ++  D  V S  +AG GF+NL L  S  + +L +++   I++GR+ +G 
Sbjct: 61  KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L DK     +N PE+ WL  +++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL +L IQ D F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A +     D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAEAGITTDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      D ++L +   LAE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LAAADLTL--LQDDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N  LRFV  +N   T  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 535 KTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580


>gi|163793124|ref|ZP_02187100.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181770|gb|EDP66282.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 585

 Score =  628 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 262/585 (44%), Positives = 380/585 (64%), Gaps = 4/585 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F  +++  L+++  +      +  DR+ +E PRD +HG +STNAAM+L++P+G 
Sbjct: 1   MNVFNQFREKIQAALEDLARRQGWPDGLPFDRVTVEPPRDLSHGDISTNAAMLLAKPVGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA  +   +   P+V+S  +AG GFINL L+ S     +++I+  G  YG +  G+
Sbjct: 61  NPRAIAAPLAEALARLPEVESAEVAGPGFINLRLAASVWLAEVAAILSEGTAYGSSTTGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+H  H R AV GD LA+L+  +G+ VTREYYINDAGAQ+ TLA 
Sbjct: 121 GRRVNVEYVSANPTGPLHAAHARGAVFGDALAALLKKAGFTVTREYYINDAGAQVETLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +   +PEG+YPG YLK VG+ +A+      +  PE +WL + +  +V+
Sbjct: 181 STHLRYREALGEDIGAIPEGHYPGEYLKDVGQAIAESDGDRWVGKPESEWLEVFRARAVE 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  ++ DL A+ IQ D F SE      +   ++   D L  +G VY G+L PPK KT 
Sbjct: 241 LMMTEVKRDLLAMGIQFDTFSSERALV--EAGAVQRAFDTLDGRGLVYTGVLEPPKGKTP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R QLLF+++  GDDVDRPL KSDGS+TYFA D+AY   K+ RG   +I V+G+D
Sbjct: 299 DDWE-PRPQLLFKASEFGDDVDRPLKKSDGSWTYFANDIAYHLDKFLRGSPELIDVLGAD 357

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   A+S  +  ++V LC+LV L+  G P++MSKRAG F+TLR V+D VGS
Sbjct: 358 HGGYVKRMKAAVTAISGGEGSLDVKLCQLVHLFDGGKPVRMSKRAGTFVTLRDVIDSVGS 417

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DSVRF+ML R+N + L+FD+ KV+EQS++NPVFYVQYA+AR  S+ R A +  P  D   
Sbjct: 418 DSVRFIMLTRRNDQTLEFDYQKVQEQSRDNPVFYVQYAHARATSVIRHAGEALPGHDLSD 477

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   S  D  EL LI  LA +PR++E+A  A EP+++AFYL ++A+ FH  W+ G
Sbjct: 478 AALAKVSLGSLTDPDELGLIRLLAGWPRLVESAADAHEPHRVAFYLGEVAAAFHSLWNKG 537

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           ++   LRF+  ++   T+ R+ LV A A++I SGL ++GV+   E
Sbjct: 538 KDEAHLRFILPDDTATTLARMALVRATATVIASGLGVMGVQPVEE 582


>gi|217976682|ref|YP_002360829.1| arginyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217502058|gb|ACK49467.1| arginyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 598

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 291/590 (49%), Positives = 387/590 (65%), Gaps = 6/590 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M ++ADF  R+   L+ I    ++  ++ L+R V+E PRD +HG L+ NAAM+ ++    
Sbjct: 9   MNIYADFHQRIAAILETIVASGRLPAELDLNRFVVEPPRDASHGDLAANAAMVYAKEAKA 68

Query: 60  ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I   +  DPDV S  +AG GFIN+ L P    +IL   +  G ++G+  
Sbjct: 69  SFSNPRQLASEIAFALAEDPDVASAEVAGPGFINISLKPDVFGRILRRALELGADFGKGA 128

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
              G KVN+E+VSANPTGPMHVGH R AV GD LA+L+ F+G +VTREYYINDAGAQ++ 
Sbjct: 129 AKAGGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLEFAGADVTREYYINDAGAQVDV 188

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA S   RY++AL     D+PEG YPG YLK VG  LA ++   L+  PE +W+   +  
Sbjct: 189 LARSAHLRYREALGEEIGDIPEGLYPGDYLKSVGATLAARFGDSLVQRPETEWMEPARAA 248

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPK 295
           +++ MM +IRDDL AL+I H IF SE    RG+    +   I  L   G VYEG LPPPK
Sbjct: 249 AIEGMMAMIRDDLAALDITHAIFFSERSLTRGEAGDQVAAAIAALRADGLVYEGRLPPPK 308

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  + DR+Q LFRST  GDDVDRPLLKSDG YTYFA+D+AY K K +RGF  +I V
Sbjct: 309 GQAAEDWE-DREQTLFRSTAFGDDVDRPLLKSDGGYTYFASDIAYHKTKIDRGFALLIDV 367

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH GYV R+ A   A+S  KA ++V LC+LV+L R G P+KMSKR+GDF+TLR VVD
Sbjct: 368 WGADHGGYVSRMRAAVEALSRGKASLDVKLCQLVKLMRAGEPVKMSKRSGDFVTLREVVD 427

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+VRFMML+RKN   L+FD  KV EQSK+NPVFYVQYA+AR RS+ RQA    P  
Sbjct: 428 EVGRDAVRFMMLFRKNDAPLEFDLSKVIEQSKDNPVFYVQYAHARARSVLRQAHVSIPAN 487

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                           D  EL L+  +A++PRVIE A  A EP++LAFYL++LAS  HGH
Sbjct: 488 KLTTSAFEEAELGLLVDPGELYLVKLVAQFPRVIEAAASAHEPHRLAFYLHELASALHGH 547

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           W+ G++ P+LRF+      LT+ RL LV  +A ++++GL ++GV +P+EM
Sbjct: 548 WTRGKDQPQLRFLNEEMPNLTIARLALVKVLAGVLSAGLGVLGVSAPDEM 597


>gi|126739455|ref|ZP_01755148.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719555|gb|EBA16264.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 581

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 261/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVIDSLTAMSAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  D  V S  +AG GF+NL L+P   + ++ +++ +G ++GR+  G 
Sbjct: 61  KPRDIAEALAGKLAADARVTSAEVAGPGFLNLRLAPVVWQGVVDAVLKAGTDFGRSDQGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L DK     L+ PE+ WL  V+++S  
Sbjct: 181 SVYLRYLEA-HGQEIAFADGTYPGDYLVPVGEALKDKVGDAYLDQPEDVWLADVREFSTD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L I+ D+F SE   +      I   +  L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIRADLARLGIEMDVFYSEKSLY--GTGRIEAALKELEEKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDR + KSDG++TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ LC+LV+L++DG   KMSKRAG F+ LR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVMLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A       D D 
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRRAAAEGIAGDDDT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   S  D ++L ++  L E+PR +E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LKSADLTLIS--DPAQLSVVKKLGEWPRQVEIAARTNEPHRIAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N  LRFV  +++  T   L L  +V+ +I++GL I+GV+   EM
Sbjct: 535 KSNEGLRFVNESSQSATHANLALARSVSIVISAGLGILGVKPAQEM 580


>gi|84687542|ref|ZP_01015418.1| arginyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664451|gb|EAQ10939.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 572

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 268/586 (45%), Positives = 381/586 (65%), Gaps = 16/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  S +   L  +  +  +   +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFADIRSLVIASLDALVAEGALPAGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGA 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A++  D  + S  +AG GF+NL L P      L   V++  +YG + +G+
Sbjct: 61  KPRDIADALSAKLAADDRIASAEVAGPGFLNLRLEPGVWAA-LVEGVLADPDYGTSDMGQ 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+A++G++VTREYYIND GAQ++ LA 
Sbjct: 120 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGHDVTREYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  K     +   E+ WL  V+D++  
Sbjct: 180 SVYLRYLEA-HGQEVAFEDGTYPGDYLIEVGEALKAKVGDAFVGKGEQFWLEDVRDFATD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM+ +IR DLKAL ++ D+F SE   +      I   I++L  +G +Y+G L PPK K +
Sbjct: 239 AMLDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAAIEDLRGKGLIYKGTLEPPKGKLS 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFKSTDYGDDVDRPIMKSDGAWTYFAPDIAYHYDKVTRGFDQLIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+ K  +++ L +LV+LY++G P KMSKRAG F+TLR VVDEVG 
Sbjct: 356 HGGYVKRMKAAVAALSDNKVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDEVGP 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF K  EQSK+NPVFYVQYA AR  S+ R+A D+  +     
Sbjct: 416 DVTRFIMLTRKNDAPLDFDFDKALEQSKDNPVFYVQYANARVHSVLRKAADMGVEPG--- 472

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                  + S  D +E+++   LAE+PR++E A    EP+++AFYLY+LAS FH  W+ G
Sbjct: 473 -------KPSLTDEAEIKVAQKLAEWPRLVEIAARTHEPHRIAFYLYELASEFHALWNKG 525

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++P LRF+  ++ + T  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 526 NDHPELRFLAESDSQATAAKIALPKAVSVVISAGLGILGVTPLEEM 571


>gi|254477547|ref|ZP_05090933.1| arginyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031790|gb|EEB72625.1| arginyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 581

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 261/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVLDCLNAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  D  V S  +AG GF+NL L     + +LS+++  G  +GR+ +G+
Sbjct: 61  KPRDIAEALATKLAADARVTSAEVAGPGFLNLRLDQGSWQAVLSNVLAEGTNFGRSNMGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F G++VTREYYIND G Q++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGFDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  K     +  PEE WL  +++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGEALKAKVGDAYVGQPEEVWLEEIRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL +L ++ D F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIREDLASLGVKMDKFFSEKSLY--GTGLIEAALKSLDDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I V G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+SE K  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSEGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++    +D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSSLRKAEEAGIAVDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      D ++L +   +AE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LAAADLSL--LDDDAQLAVAKKIAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N  LRFV  ++   T  ++ L   V+ +I++GL I+GV    EM
Sbjct: 535 KTNEGLRFVNESSASATHAKMALAKTVSIVISAGLGILGVTPAQEM 580


>gi|99080744|ref|YP_612898.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|122984355|sp|Q1GI80|SYR_SILST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|99037024|gb|ABF63636.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 580

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 259/586 (44%), Positives = 370/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL L  S  + +L   + +   YGR+ +G+
Sbjct: 61  KPRDIAEALAAKLAQDKRITSAEVAGPGFLNLRLDLSVWQDVLGKALNAEEAYGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY +A +    + P+G YPG YLK VG  L DK+    +  PEE WL  V++++  
Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKDKFGDRFVGQPEETWLEEVRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL  L ++ D+F SE   +      I   +++L  +G +YEG+L PPK K  
Sbjct: 240 MMMDLIREDLALLGVEMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 DDWE-PRIQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  ++V LC+LV+L++DG   KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDVKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++     D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREAGIACDEAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        ++L +   +AE+PR +E A    EP+++AF+LY+LAS  HG +  G
Sbjct: 477 LSGADLSL--LTHDAQLAVARKVAEWPRQVEIAARTNEPHRIAFFLYELASDLHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  ++   T   L L  AV+ +I++GL I+GV+   EM
Sbjct: 535 KSEESLRFVNESSELATHANLALARAVSIVISAGLGILGVKPAQEM 580


>gi|259419075|ref|ZP_05742992.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345297|gb|EEW57151.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 580

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 257/586 (43%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL L  S  + +L   +  G  YGR+ +G+
Sbjct: 61  KPRDIAEALAAKLGQDARITSAEVAGPGFLNLRLDLSVWQSVLGKALHEGEAYGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY +A +    + P+G YPG YLK VG  L +K+    +  PE+ WL  V+ ++ +
Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKEKFGDTFVGQPEDVWLEEVRAFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL  L ++ D+F SE   +      I   +++L  +G +YEG+L PPK K  
Sbjct: 240 MMMDLIREDLGLLGVKMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I + G+D
Sbjct: 298 DDWE-PRVQTLFKSTAHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGQVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++     D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREAGIACDDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                + Q      ++L +   +AE+PR +E A    EP+++AF+LYDLAS  HG +  G
Sbjct: 477 LNAADLSQ--LTHEAQLSVARKIAEWPRQVEIAARTNEPHRIAFFLYDLASDLHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  ++   T   L L  AV+ +I++GL I+GV+   EM
Sbjct: 535 KSEESLRFVNESSESATHANLALARAVSIVISAGLGILGVKPAQEM 580


>gi|149202735|ref|ZP_01879707.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144017|gb|EDM32051.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 581

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 262/586 (44%), Positives = 375/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D    +   L  +    ++   + +  + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFTDMRDLVLETLAAMQAGGQLPAGLDMTSVTVEPPRDAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + AR+  D  V+S  +AG GF+NL L P+  +++  + +  G  YGR+ +G 
Sbjct: 61  KPREIADALAARLAEDGRVESAEVAGPGFLNLRLVPAVWQRVARAALTEGTGYGRSTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LA L+ + GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALARLLDYVGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L  +     +  PEE WL  ++D++  
Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKVQVGDAYVGQPEEVWLEPIRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DL AL ++ D+F SE   +      I   I++L  +G +Y G+L PPK K  
Sbjct: 240 KMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S  +  +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +    ++   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGIAVEDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  +        +EL +   +AE+PR++E A  + EP+++AFYLYDLAS  H  W+ G
Sbjct: 477 LAQADLS--GLTHEAELAVARKIAEWPRLVEIAGRSNEPHRVAFYLYDLASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  +   +  ++ L  AV  +I++GL I+GV    EM
Sbjct: 535 NDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580


>gi|56697351|ref|YP_167719.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81349499|sp|Q5LQI6|SYR_SILPO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56679088|gb|AAV95754.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 581

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 263/586 (44%), Positives = 382/586 (65%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +    +   L+++  +  + + +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFTEMRGLVLEALEQMQAEGALPQGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  D  V    +AG GF+NL L+    ++++ ++++ G  YGR+ +G+
Sbjct: 61  KPRDIAETLAARLAADARVAKAEVAGPGFLNLTLAAPVWQRVVGTVLLDGTAYGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYQVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +    +  +G YPG YL  VG+ L DK     +  PEE WL  ++D++  
Sbjct: 181 SVYLRYLEA-HGQAVEFVDGTYPGEYLVEVGQALKDKVGDAYVGQPEEVWLEAIRDFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L ++ D+F SE   +      I   ID+L  +G +Y G L PPK K  
Sbjct: 240 AMMELIRADLAQLGVKMDVFYSEKSLY--GTGRIEAAIDSLRAKGLIYRGTLEPPKGKLP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L+++G P KMSKRAG+F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A +    +D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVSSVLRRAAEAG--IDTSD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +EL ++  LAE+PR++E A    EP+++AFYLY+LA  FH  W+ G
Sbjct: 475 TALRAADLGLLGHEAELAVMRKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   LRF+Q  +   +  ++ L  +VA +I++GL I+GV    EM
Sbjct: 535 NDVSELRFIQDGDEGTSQAKIALARSVAVVISAGLAILGVTPAEEM 580


>gi|300022780|ref|YP_003755391.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524601|gb|ADJ23070.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 586

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 279/586 (47%), Positives = 386/586 (65%), Gaps = 2/586 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F++  +R++  L+ +  +  +   + L     E PRD +HG ++ NAA++L++    
Sbjct: 1   MNVFSEVEARVRAALEALKTEGVLPSDLALPEFDAEPPRDASHGDIAVNAALVLAKAAKK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A+++   D+  + +AG GF+N+   P     ++  I+  G  YG      
Sbjct: 61  KPRDIADALKAKLEAHGDIQKIEVAGPGFLNITFKPEVWHGLVRDILSEGGRYGAGSSRG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+N+E+VSANPTGPMHVGHCR AV GD LA+L+ F+GY+VTREYYINDAG Q+N LA 
Sbjct: 121 DGKLNVEYVSANPTGPMHVGHCRGAVFGDALANLLVFAGYDVTREYYINDAGGQVNVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +   +PEG YPG YLK VG+ LA ++   L+N PEE+WLPIV+  +++
Sbjct: 181 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGEALAKEHGPSLINMPEERWLPIVRSIAIE 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +I+DDL ALNI+HD+F SE          I+  I  L ++G +YEG L  PK    
Sbjct: 241 KMMAMIKDDLAALNIRHDVFFSEASLQADGKDQIKAAIAELEKKGLIYEGKLEKPKGHDD 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              + DR Q LF+ST  GDD DR L KSDG+YTYFA D+AY   K  RGF ++I V G+D
Sbjct: 301 DDWE-DRVQTLFKSTDFGDDEDRALKKSDGTYTYFAGDVAYHYDKLSRGFRHLINVFGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R++AV AA+S+K A ++V + +LVRL++ G P KMSKRAG F+TLR VVDEVG 
Sbjct: 360 HVGYIPRIKAVVAALSDKTADLDVKVVQLVRLFKAGEPYKMSKRAGTFVTLRDVVDEVGR 419

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VR+MML+RKN E LDFDF KV EQSK+NPVFYVQYA+AR  S+ R A +  P LD  +
Sbjct: 420 DPVRYMMLYRKNQETLDFDFAKVTEQSKDNPVFYVQYAHARSASVLRNAVEQIPGLDVSV 479

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       DT E+ LI  LA +PR++E A  A EP+++AFYLYDLAS  H  W+ G
Sbjct: 480 DVLRRADLSLLTDTGEIDLIKRLASFPRLVEGAASAHEPHRIAFYLYDLASALHSQWTRG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++P LRF+Q+N+   T  RL L+ A  ++I SGL+++GVE+P+ M
Sbjct: 540 NDSPHLRFIQSNDGVATSARLALIAATKTVIKSGLDVLGVEAPDAM 585


>gi|163741411|ref|ZP_02148802.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385145|gb|EDQ09523.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 581

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 263/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVLDCLTAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +  ++  D  V S  +AG GF+NL L  S  + +L +++   I++GR+ +G 
Sbjct: 61  KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L DK     +N PE+ WL  +++++  
Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL +L IQ D F SE   +      I   + +L  +G +YEG+L PPK K  
Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A +    +  D 
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAEAG--IATDD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D ++L +   LAE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 475 ATLAAADLTLLQDDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N  LRFV  +N   T  ++ L  AV+ +I++GL I+GV    EM
Sbjct: 535 KTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580


>gi|310816694|ref|YP_003964658.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755429|gb|ADO43358.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 580

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 267/586 (45%), Positives = 384/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF    + +   L ++  +  +   +  D + +E PRD  HG ++TNAAM+L++P G+
Sbjct: 1   MNLFTQMRALVIACLDQLATEGVIPAGLPTDNVAVEPPRDAGHGDMATNAAMVLAKPAGV 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A++ +DP V S  +AG GF+NL LS    + ++ +++     +GR+ +G 
Sbjct: 61  QPRVIADALAAKLVLDPRVASAEVAGPGFLNLRLSADIWQGVVKAVLSD-AGFGRSTLGA 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGPMHVGH R AV GD LASL+A++GY+VTREYYIND GAQ++ LA 
Sbjct: 120 GKRVNVEYVSANPTGPMHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A +    D+ EG YPG YL  VG+ L +KY   LL+  E+ WL  +++++  
Sbjct: 180 SAYERYREA-HGQQPDIREGLYPGDYLIEVGQALKEKYGDTLLDKGEQYWLAEIREFATL 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++IR DL  LN++ D+F SE   +      I   I  L  QG +YEG+L PPK K  
Sbjct: 239 QMMEMIRGDLAMLNVKMDVFSSEKALY--GTGKIEAAIAKLEEQGLIYEGVLEPPKGKLP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST+ GDDVDRP+ KSDG +TYFA D+AY   K +RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFRSTLHGDDVDRPIKKSDGQWTYFAPDIAYHYDKVQRGFDLLIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S     +++ L +LV+L+++G P KMSKRAG F+TLR VV++ G+
Sbjct: 356 HGGYVKRMKAAVSALSGGTVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR  S+ R+A+     LD   
Sbjct: 416 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYAHARVHSVLRRAQAAG--LDVSD 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +EL+++  LAE+PR+IE A    EP+++AFYLY+LAS FHG W+ G
Sbjct: 474 AALIGADLTRVGHEAELKVMRQLAEWPRLIEIAARGNEPHRIAFYLYELASDFHGLWNRG 533

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  + + +  ++ L+ AVA +I+ GL I+GV    EM
Sbjct: 534 NDDTALRFLQEGDAETSQAKIALIRAVAVVISEGLGILGVTPVEEM 579


>gi|86138649|ref|ZP_01057222.1| arginyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824709|gb|EAQ44911.1| arginyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 581

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 264/586 (45%), Positives = 376/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  + + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFSDIRALVIDSLTAMTAEGALPEGQDFANVAVEPPRDSAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A++  D  + S  +AG GF+NL LSP   + +L +++  G++YGR  +G+
Sbjct: 61  KPRDIADALAAKLAQDARIASAEVAGPGFLNLRLSPVVWQSVLGAVLEGGLDYGRANLGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLGYAGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YLK VG  L DK     LN  E+ WL  V+++S  
Sbjct: 181 SVYLRYLEA-HGQEVAFADGTYPGDYLKPVGAALKDKVGDAYLNKGEDVWLSEVREFSTD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L I+ D+F SE   +      I   ++ L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIREDLALLGIKMDVFYSEKSLY--GTGRIEAALEELESKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDR + KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ LC+LV+L++DG   KMSKRAG F+TLR VVD VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NP+FYVQYA AR  S  R+A +     D  +
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPIFYVQYANARICSTLRKAGEADIATDDAV 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                + Q S    ++L ++  LAE+PR IE A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LGAADLAQVS--HPAQLAVVKKLAEWPRQIEIAARTNEPHRVAFYLYDLASELHGLYHLG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  ++   T   L L  +V+ +I++GL I+GV+   EM
Sbjct: 535 KTEFGLRFVNESSETATHANLALARSVSIVISAGLGILGVKPAQEM 580


>gi|149914960|ref|ZP_01903489.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811148|gb|EDM70985.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 581

 Score =  623 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 270/586 (46%), Positives = 377/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF +    +   L  +  + K+ + +    + +E PRD AHG ++TNAAM+L++P GL
Sbjct: 1   MNLFTEIHGLVLAELGRLQAEGKLPEALDFANVAVEPPRDPAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  D  ++S  +AG GF+NL LS      ++ + +  G  +GR+ +G 
Sbjct: 61  QPRAIAEDLAARLLEDDRIESADVAGPGFLNLRLSSGMWHAVVRAALQDGEAFGRSAMGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ + GYEVTREYYIND GAQ++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYVGYEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL  VG+ L  +  +  ++ PE+ WL  V+ ++  
Sbjct: 181 SVYLRYLEA-HGQAVAFEDGTYPGDYLIEVGEALKAEVGAAYVDQPEDVWLAEVRSFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IRDDLK+L ++ D+F SE   +      I   + +L  +G +YEG+L PPK KT 
Sbjct: 240 RMMDLIRDDLKSLGVEMDVFFSEKSLY--GTGLIEKALKSLEDRGLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTDYGDDVDRPVKKSDGSWTYFAPDIAYHYDKITRGFDKLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A   A+S+ +  +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVGALSDNRVPLDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A++   D++   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAREAGIDVEDAT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +  +         EL +   LAE+PR+ E A    EP+++AFYLYDLAS  H  W+ G
Sbjct: 477 LAKADLS--GLVHEVELAVARKLAEWPRMAELAGRTHEPHRVAFYLYDLASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q +N   +  ++ L  +V  +I+SGL I+GV    EM
Sbjct: 535 NDEPALRFLQEDNPATSQAKIALARSVTVVISSGLGILGVTPAEEM 580


>gi|254462799|ref|ZP_05076215.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206679388|gb|EDZ43875.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 577

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 263/586 (44%), Positives = 380/586 (64%), Gaps = 11/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S +   L+ +  +  +   +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFDDIRSAVLTSLEAMQAQGVLPADLDFANVAVEPPRDGAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ +   + +DP ++SV +AG GF+N+ LS +  + ++ +++  G ++GR+ +G+
Sbjct: 61  KPRDIADALARHLILDPRIESVDVAGPGFLNMRLSSALWQGVIGTVLDQGADFGRSDMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY VTREYYIND GAQ++ LA 
Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYAVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+EL +K S   +   E  WL  V+++S +
Sbjct: 181 SVYLRYLEA-HGQEVAFEDGTYPGDYLIPVGEELKEKVSDAYVGKHESDWLLDVREFSTE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM ++R DL +L I+ D+F SE   +      I   ID L  +G +YEG+L PPK K  
Sbjct: 240 KMMDLVRADLASLGIEMDVFYSEKSLY--GTGRIEAAIDALKDKGLIYEGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGAWTYFAPDIAYHYDKVSRGFDMLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            + RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A D   DL    
Sbjct: 417 GATRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVHSVLRKASDAGLDL---- 472

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +E+ +   LAE+PR++  A    EP+++AFYLYDLAS FH  ++ G
Sbjct: 473 --SATPDLTQLNHEAEIAVAKKLAEWPRLVALAARTNEPHRIAFYLYDLASEFHALYNRG 530

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            E P LRF+Q      ++ ++ L  +V+ +I +GL I+GV+   EM
Sbjct: 531 NELPELRFLQDGQDATSISKIALARSVSVVICAGLGILGVDPVEEM 576


>gi|260427188|ref|ZP_05781167.1| arginyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260421680|gb|EEX14931.1| arginyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 585

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 261/586 (44%), Positives = 387/586 (66%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   ++ +  +  + + +    + +E PRD  HG ++TNAAM+L++P   
Sbjct: 6   MNLFTDIRALVLQAIEALQAEGILPEGLNTAPVTVEPPRDPLHGDMATNAAMVLAKPAKA 65

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A+I  D  + +  +AG GF+NL L+PS  + +  +++  G ++GR+ +G+
Sbjct: 66  RPRDIAEALAAKIGADDRIVAAEVAGPGFLNLRLAPSVWQALPGAVLTQGTDFGRSDMGQ 125

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 126 GARINVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +AL  ++ +  +G YPG YL  VG+ LA +   + ++ PEE WL  +++++  
Sbjct: 186 SVYLRYLEAL-GHEVEFADGTYPGDYLIPVGEMLAARVGEQYVDQPEEVWLEEIRNFATD 244

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MMK+IR+DLK L ++ D F SE   +      I   I++L  +G +Y G+L PPK KT 
Sbjct: 245 EMMKLIREDLKLLGVEMDHFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKTP 302

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 303 EDWE-PREQTLFKSTEHGDDVDRPIKKSDGAWTYFAPDIAYHYDKVSRGFDQLIDVFGAD 361

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG F+TLR VV+EVG 
Sbjct: 362 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEEVGP 421

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF K  EQSKENPVFYVQYA+AR  S+ R+A +   D+    
Sbjct: 422 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKAVEQGIDVSDAA 481

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R  +   +    +EL L+  +AE+PR++E A    EP+K+A +L +LAS  HG W+ G
Sbjct: 482 LARADLT--ALDHEAELGLMKKVAEWPRLVEIAAKGHEPHKVAIWLNELASELHGLWNRG 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++ + +  ++ L  +VA +I++GL I+GV    EM
Sbjct: 540 HDEPGLRFLQ-DDAETSQRKIALARSVAVVISAGLGILGVTPAEEM 584


>gi|294676411|ref|YP_003577026.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294475231|gb|ADE84619.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 581

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 266/586 (45%), Positives = 383/586 (65%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + +   L  +  +  +   +  + + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFADVRAVVLAALDAMVAEGALPAGLDTQAVAVEPPRDAAHGDMATNAAMVLAKPAGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE +VA++  D  + S  +AG GFINL L+P     ++ + + +G ++GR+ +G+
Sbjct: 61  NPRALAEGLVAKLAADARIVSAEVAGPGFINLRLAPGLWADVVRAALTAGSDFGRSTLGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GIKVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A    + ++ EG YPG YL  VG+ L +KY + L++ PE  WL  V+ ++ +
Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKEKYGASLIDKPESDWLAEVRVFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L ++ D+F SE   +      I   +  L   G +YEG+L PPK K  
Sbjct: 240 AMMAMIREDLALLGVKMDVFYSEKSLY--GTGQIEAALQRLQDLGLIYEGVLEPPKGKLP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + +R+Q LFRST  GDDVDRP+ KSDG++TYFA D+AY   K ERGFD +I V G+D
Sbjct: 298 EDWE-EREQTLFRSTSYGDDVDRPVKKSDGAWTYFAPDIAYHWTKIERGFDQLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+SE +  +++ L +LV+L+++G P KMSKRAG F+TLR VV++ G+
Sbjct: 357 HGGYVKRMKAAVAALSENRVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
              RF ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR  S+ R+A D+   +D   
Sbjct: 417 GVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYAHARVASVLRKAVDLG--IDVTD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   +     +E  L   +AE+PR +E A  A EP+++AF+LY++AS  H  W+ G
Sbjct: 475 AALAAADLDRNTHEAERALAKKIAEWPRQVEIAARANEPHRVAFFLYEIASDLHALWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q  +   +  ++ L  A A +I++GL I+GV    EM
Sbjct: 535 NDEPSLRFLQEGDLAASSAKIALARASAVVISAGLGILGVTPAEEM 580


>gi|110680351|ref|YP_683358.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123361735|sp|Q164C1|SYR_ROSDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109456467|gb|ABG32672.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 580

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 268/586 (45%), Positives = 389/586 (66%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA+  + +   + ++    ++   + +  + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFAEMRALVLECVDQMVTAGQLPADLNMTNVTVEPPRDAAHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +   +  D  + S  +AG GF+NL ++P+  R +L S++  G ++GR  IG 
Sbjct: 61  KPRDIAEALAQLLAADARIASAEVAGPGFLNLRIAPTAWRAVLLSVLDKGTDFGRADIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++G++VTREYYIND GAQ++ LA 
Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   P+G YPG YL  VG++L D      +  PEE WL  ++ ++  
Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIPVGQQLKDLKGDSYVGQPEEAWLQDIRTFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DLK+L ++ D+F SE   +      I   I++L  +G +Y+G+L PPK K  
Sbjct: 240 AMMDLIRADLKSLGVEMDVFYSEKSLY--GTGRIEAAIEDLKSKGLIYDGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDGS+TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVSRGYDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA+AR  S+ R+A+     +D D 
Sbjct: 417 DVARFVMLTRKNDAMLDFDFDKVMEQSRENPVFYVQYAHARVASVMRKAEAAGIAVDMDT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        +EL LI  L+E+PR++E A  + EP+++AFYLY+L+ VFHG W+ G
Sbjct: 477 LKAADLSL--LNHEAELGLIAKLSEWPRLVETAARSNEPHRVAFYLYELSGVFHGLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRFVQ ++ K+T  ++ L  A + +I +GL I+GV    EM
Sbjct: 535 NDVPELRFVQ-DDPKVTQAKIALARACSVVIAAGLGILGVTPAQEM 579


>gi|255263999|ref|ZP_05343341.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106334|gb|EET49008.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 579

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 260/586 (44%), Positives = 372/586 (63%), Gaps = 9/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA+  + +   L+ +     +   + +D + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFANIRTLVIESLEALVADGVLPADLNMDNVTVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  +++ +  +    +AG GF+NL L+    + ++      G  YG++++G 
Sbjct: 61  KPRDIAEALATKLQDENRITVAEVAGPGFLNLRLADWVWQALVKKTYDGG--YGQSIMGT 118

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           GT+VN+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND GAQ++ LA 
Sbjct: 119 GTRVNVEYVSANPTGPLHVGHVRGAVFGDALASLLAYAGYDVTREYYINDGGAQVDVLAR 178

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF RY +A    +    +G YPG YL  +G+ L + +   L+   E  WL  V++++  
Sbjct: 179 SVFLRYLEA-NGQEVAFEDGTYPGDYLIPLGQALFEMHGDALVGKDEADWLEDVREFATD 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL AL I+ D+F SE   +      I   I  L  +G +Y G L PPK K  
Sbjct: 238 AMMNLIRSDLAALGIEMDVFYSEKSLY--GTGQIEKSIAELDAKGLIYRGTLEPPKGKKP 295

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  R FD +I V G+D
Sbjct: 296 EDWE-PREQTLFKSTEHGDDVDRPIQKSDGAWTYFAPDIAYHYDKISREFDELIDVFGAD 354

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  ++V L +LV+L ++G P KMSKRAG FITLR VVD+VG 
Sbjct: 355 HGGYVKRMKAAVSALSDGQVPLDVKLTQLVKLTKNGEPFKMSKRAGTFITLRDVVDQVGP 414

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RK    LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A +   D+  D 
Sbjct: 415 DVTRFVMLTRKQDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAVEANIDVSDDA 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      +  EL L   +AE+PR++E A    EP+++AFYLY+LA  FH  W+ G
Sbjct: 475 LSS--VDLAGMTNEGELALAKKIAEWPRLVEIAARTNEPHRIAFYLYELAGEFHALWNRG 532

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  LRF Q  + + T  ++ L+ A A +I++GL I+GV   NEM
Sbjct: 533 NTDESLRFFQEGDSETTQAKIALIRAAAVVISAGLGILGVTPANEM 578


>gi|114762852|ref|ZP_01442284.1| arginyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114544462|gb|EAU47469.1| arginyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 580

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 264/586 (45%), Positives = 382/586 (65%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  + +   ++ +  +  + + +    + +E PRD  HG ++TNAAM+L++P   
Sbjct: 1   MNLFTDIRALVLQAIEALQAEGALPEGLATAAVTVEPPRDPLHGDMATNAAMVLAKPAKA 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A+I  D  VD   +AG GF+NL L+PS  + +   ++ +G ++GR+ +G+
Sbjct: 61  KPRDIAEALAAKIAADDRVDHAEVAGPGFLNLRLAPSVWQALPQGVLAAGTDFGRSQMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA 
Sbjct: 121 GAKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A   ++ +  +G YPG YL  VG++L ++     +  PEE WL  V++++  
Sbjct: 181 SVYLRYLEA-QGHEVEFADGTYPGDYLIPVGEKLKEQVGDRYVGQPEEVWLEEVRNFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR+DLK L ++ D F SE   +      I   I++L  +G +Y G+L PPK K  
Sbjct: 240 EMMALIREDLKMLGVEMDQFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDG++TYFA D+AY   K  RG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGYDQLIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ L +LV+LY++G P KMSKRAG F+TLR VV+EVG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLYKNGEPFKMSKRAGTFVTLRDVVEEVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF K  EQSKENPVFYVQYA+AR  S+ R+A +   D+    
Sbjct: 417 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKATEAGVDVSDAA 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   S    +EL L+  LAE+PR++E A    EP+K+A +L +LAS  H  W+ G
Sbjct: 477 LAGADVSVLS--HEAELGLMKKLAEWPRLVEIAAKGHEPHKVAIWLNELASDLHALWNKG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q ++  L+  ++ L  AVA +I++GL I+GV    EM
Sbjct: 535 HDEPALRFLQ-DDAALSQSKIALARAVAVVISAGLGILGVTPVEEM 579


>gi|295707249|ref|YP_003600324.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804908|gb|ADF41974.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 556

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 335/587 (57%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +++   K  + EK  L  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA        ++ + IAG GFIN Y++ SYL +++ +IV +G  YG+  +G
Sbjct: 61  APRVIAEELVANFDKSKASIEKIDIAGPGFINFYMNNSYLTELIPTIVKAGEAYGQTNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   + ++P   Y G  + ++GKELA ++  + +N  EE+     + Y +
Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYVNASEEERFEFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL+   ++ D++ SE   ++ D   I   ++ L +QG+VYE          
Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKND--KISVALETLKKQGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K +RGFD +I + G+
Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + ++V+LY++G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD      QS ENPV+Y QYA+AR  SI RQ +++       
Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +   +           E +L+  + E+P+ +  A   + P+++  Y++DLAS FH  ++ 
Sbjct: 456 IQSTSGADLSLISAEKETELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + ++N + +  R++LV AV   + + L +IGV +P +M
Sbjct: 516 E------KVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556


>gi|296284542|ref|ZP_06862540.1| arginyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 581

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 266/587 (45%), Positives = 374/587 (63%), Gaps = 16/587 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++A ++ R+   L  ++ +  +   +    + +E PRD AHG ++TNAAM+L++P   +P
Sbjct: 7   IYAAYAERIDAVLSALEAEGTLPPDVSRANVSVEPPRDPAHGDIATNAAMVLAKPAKTNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE IV  +K DPD++S  IAG GFINL ++       + +I   G EYGR+ +GK T
Sbjct: 67  RALAEQIVEHLKRDPDIESAEIAGPGFINLRIADRAWVDEIRAIGSLGGEYGRSSMGKDT 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++N+E+VSANPTGPMH+GHCR AVVGD LASL+  +G+ VTREYY+NDAG Q++ LA S 
Sbjct: 127 RINVEYVSANPTGPMHMGHCRGAVVGDALASLLDATGHSVTREYYVNDAGGQVDVLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +  ++PEG YPG YL  VGK LA+++  E    PE +WLP+ +  +V AM
Sbjct: 187 HVRYREALGESVGEIPEGLYPGEYLIPVGKALAEEFGDEYAAAPESEWLPLFRPRAVAAM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR DL  L I HD+F SE +          +    L  QG VY+G L  PK KT + 
Sbjct: 247 MDLIRADLAKLGIAHDVFASEAELQA--AGKPAEAEAWLREQGLVYDGELEKPKGKTPED 304

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            +     L FRST  GDD DRP+ KS+GS+TYF ADLAY   K E   D +I + G+DH+
Sbjct: 305 WEPVELPL-FRSTQFGDDQDRPIKKSNGSWTYFGADLAYHMQKAE-NADALIDIWGADHA 362

Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           G VKR++A  AA+S+ + +    +V L ++V+L RDG P+KMSKR+G+F+TL  VVDEVG
Sbjct: 363 GTVKRIKAAVAALSQGQGKPIPFDVKLVQMVQLMRDGEPVKMSKRSGNFVTLADVVDEVG 422

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S  R+A +        
Sbjct: 423 KDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARICSTMRKAAEEG------ 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P +        D   + L+   A+YPR++E+A  A+EP+++AFYLYDLA+ FH  W+ 
Sbjct: 477 LAPSDEALDALTADD--VALVKLAAQYPRLVESAAQAREPHRIAFYLYDLAAAFHAFWNA 534

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++   R +   +RKL+  RL LV  +  +I +GL ++GVE+  EM
Sbjct: 535 GNDDSSKRVILTQDRKLSGARLYLVAQIGQVIRNGLGLLGVEAVEEM 581


>gi|114771796|ref|ZP_01449189.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114547612|gb|EAU50503.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 576

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 269/586 (45%), Positives = 381/586 (65%), Gaps = 12/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  + +   L+ +     + K++    + +E PRD +HG +STNAAM+L++P G+
Sbjct: 1   MNLFSDIRNLVLASLEILQSNGTLPKELNFSNVTVEPPRDASHGDMSTNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ +   +  D  V S  +AG GF+NL L   Y   I+  ++  G  YGR  IG 
Sbjct: 61  NPRLIADALSLLLVNDERVISADVAGPGFLNLCLKQDYWTSIIPFVLNMGTNYGRATIGT 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GIKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A      +  +G YPG YL  +G +L +KY   L++ PE +W+  ++ ++ +
Sbjct: 181 SVYLRYLEA-NGQAVEFVDGTYPGDYLVELGVDLKNKYGDSLVDKPETEWIAELRLFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL  L I+ D+F SE   +      I   + +L  +G VY+G+L PPK K  
Sbjct: 240 KMMDLIRSDLALLGIRMDVFFSEKSLY--GTGLIEAALADLDGKGLVYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDRP+ KSDGS+TYFA D+AY   K +RGFD +I + G+D
Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPIAKSDGSWTYFAPDIAYHFDKVQRGFDQLIDIFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S ++  +++ L +LV+LY++G P KMSKRAG F+TLR VV++VG 
Sbjct: 357 HGGYVKRMKAAVSALSNQQVSLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVEQVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV+EQSK+NPVFYVQYA+AR  S+  +AKD    +D   
Sbjct: 417 DVTRFVMLTRKNDAPLDFDFAKVQEQSKDNPVFYVQYAHARISSVLSKAKDANMKIDVKT 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           F        S    SE+ +I  LAE+PR++E A    EP+++AFYLY+LA  FH  W+ G
Sbjct: 477 FK-------SLKHPSEITVIKKLAEWPRLLELAAKHNEPHRVAFYLYELAGDFHALWNIG 529

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +E P  RF+Q +N +L+  +L +V AV   I +GL I+GV   +EM
Sbjct: 530 KEAPETRFLQEDNPELSAEKLSMVSAVQLTIAAGLTILGVAPIDEM 575


>gi|294501901|ref|YP_003565601.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351838|gb|ADE72167.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 556

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 335/587 (57%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +++   K  + EK  L  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA        ++ + IAG GFIN Y++ SYL +++ +IV +G  YG+  +G
Sbjct: 61  APRVIAEELVANFDKSQASIEKIDIAGPGFINFYMNNSYLAELIPTIVKAGEAYGQTNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   + ++P   Y G  + ++GKELA ++  +  N  EE+     + Y +
Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYANASEEERFEFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL+   ++ D++ SE   ++ D   I   ++ L +QG+VYE          
Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKND--KISIALETLKKQGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K +RGFD +I + G+
Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + ++V+LY++G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD      QS ENPV+Y QYA+AR  SI RQ +++       
Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +   +           E++L+  + E+P+ +  A   + P+++  Y++DLAS FH  ++ 
Sbjct: 456 IQSTSGADLSLISAEKEMELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + ++N + +  R++LV AV   + + L +IGV +P +M
Sbjct: 516 E------KVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556


>gi|89101282|ref|ZP_01174100.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084002|gb|EAR63185.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 556

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 217/587 (36%), Positives = 336/587 (57%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +     S LK  +K+   K  +  ++ +  +++E P++ AHG  STN AM L+R    
Sbjct: 1   MNIVEQVQSNLKEEIKQAVIKAGLAAEEQIPDVILETPKEKAHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE ++         ++ + IAG GFIN Y++ SYL  ++ +++ +G +YG    G
Sbjct: 61  APRMIAEQLIENFDSSKASIEKIEIAGPGFINFYMNNSYLTNLIPTVLDAGAQYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV IEFVSANPTG +H+GH R A VGD+L+S++A +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGQKVQIEFVSANPTGDLHLGHARGAAVGDSLSSILAKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++P   Y G  +  +G+ LAD++  + +N  E++     ++Y +
Sbjct: 181 LSVEARYFQAL-GMEKEMPADGYHGADIIGIGQRLADEFGDKYVNADEKERFDAFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M+ ++ DL+   +  D++ SE   ++     I D +  L   G+VYE          
Sbjct: 240 KYEMEKLKKDLEDFRVPFDVWYSETSLYQN--GKIDDALKALKENGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGSYTY   D+AY K K ERGF+ +I V G+
Sbjct: 288 ------EEGATWFRSTEFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + +LV LY++G  +KMSKR G  +T+R +VDEVG
Sbjct: 342 DHHGYIPRMKAAIQALGYGKDALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD      QS +NPV+Y QYA+AR  SI RQ ++    L  D
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSQSNDNPVYYAQYAHARISSILRQGEEQGMALSAD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               ++I  E      E+ L+  L E+P+ +  A   + P+++  Y+++LAS FH  ++ 
Sbjct: 462 -ADFSLISAE-----KEIDLLKKLGEFPQAVAEAAEKRMPHRITNYIFELASAFHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + ++N + T  RL L+ AV + + + L +IGV +P +M
Sbjct: 516 E------KVLDSDNPEKTKARLGLIKAVQTALRNALKLIGVSAPEKM 556


>gi|323137650|ref|ZP_08072726.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396947|gb|EFX99472.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 593

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/594 (50%), Positives = 399/594 (67%), Gaps = 11/594 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL- 59
           M +F  F +R+ + L+ I    ++ +  L R V+E P+D + G L+ NAAM+ +R     
Sbjct: 1   MNIFDIFHARIASILEGIKADGRLPEPDLARFVVEPPKDASLGDLACNAAMVFAREAKAH 60

Query: 60  --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             +P  +A  I   +     V +  +AG GFIN+ L P    ++L + ++    YGR   
Sbjct: 61  FANPRELAVEICYALAQSEGVATAEVAGPGFINIRLKPEIFAQVLRAALLDPDNYGRVEK 120

Query: 118 GK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           G+      KVN+E+VSANPTGPMHVGH R AV GD LA+L+AFSG EVTREYYINDAGAQ
Sbjct: 121 GRAGALQGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLAFSGCEVTREYYINDAGAQ 180

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ LA S F RY++AL      +PEG YPG YLK VG+ LA  +  ELL+ PE +WLP+V
Sbjct: 181 VDVLARSAFLRYREAL-GETITIPEGLYPGDYLKPVGEALAKAHGRELLDRPEGEWLPVV 239

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGIL 291
           +  ++ AMM +IRDDL ALNI+H+IF SE   H     PS I   I+ L  +G VYEG L
Sbjct: 240 RREAIDAMMDMIRDDLAALNIRHEIFFSERTLHDRSNGPSKIDAAIEWLREKGLVYEGRL 299

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
           PPPK +     + DR+Q LFRST  GDDVDR L KSDGS TYFA+D+AY K K +RGFD 
Sbjct: 300 PPPKGQLPDDWE-DREQTLFRSTDFGDDVDRALKKSDGSPTYFASDIAYHKDKIDRGFDT 358

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++ V G+DH GYVKR+ A  AA+S +K  ++V LC+LV+L R+G P+KMSKRAGDF+TLR
Sbjct: 359 LVDVWGADHGGYVKRMGAAVAALSGRKVALDVKLCQLVKLMRNGEPVKMSKRAGDFVTLR 418

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VVDEVG D+VRFMML+RKN   LDFD  KV EQSK+N VFYVQYA+AR +S+ RQA   
Sbjct: 419 EVVDEVGVDAVRFMMLYRKNDAPLDFDLAKVIEQSKDNAVFYVQYAHARAKSVMRQALAA 478

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           FPDLD  +   +    E   D  ELQL   +A+YPR IE A  A EP+++AFYL++L+SV
Sbjct: 479 FPDLDISMAALSGAKFEMLTDEGELQLARVIAQYPRAIEAAAAAHEPHRVAFYLHELSSV 538

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH HW+ G++ P+LRFV +  R LT  R+ LV ++  ++ SGL ++GV +P+EM
Sbjct: 539 FHSHWNKGKDQPQLRFVNSTERDLTSARVALVLSLTVVLGSGLRLLGVSAPDEM 592


>gi|56421936|ref|YP_149254.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261420805|ref|YP_003254487.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297531600|ref|YP_003672875.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|319768475|ref|YP_004133976.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|81346254|sp|Q5KUF0|SYR_GEOKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56381778|dbj|BAD77686.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261377262|gb|ACX80005.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297254852|gb|ADI28298.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|317113341|gb|ADU95833.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 557

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 218/587 (37%), Positives = 329/587 (56%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      ++K  +++   +  +     L  +++E PRD AHG  STN AM L+R    
Sbjct: 1   MNIVGQIKEKMKEEIRQAAVRAGLASADELPDVLLEVPRDKAHGDYSTNIAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV ++  +   V  + IAG GFIN Y+   YL  ++ +I+ +G  YG + +G
Sbjct: 61  PPRAIAEAIVGQLDRERMSVARIEIAGPGFINFYMDNRYLTAVVPAILQAGQAYGESNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++A +G++VTREYYINDAG QI  LA
Sbjct: 121 NGEKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILAKAGFDVTREYYINDAGKQIYNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   D  LPE  Y G  +  +GK+LA++Y    +   EE+ L   +DY +
Sbjct: 181 KSVEARYFQAL-GVDMPLPEDGYYGDDIVEIGKKLAEEYGDRFVEMEEEERLAFFRDYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I+ DL    +  D++ SE   +  +   I + +  L  +GY+YE          
Sbjct: 240 RYELEKIKKDLADFRVPFDVWYSETSLY--ESGKIDEALSTLRERGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G+
Sbjct: 288 ------QDGATWFRSTAFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFKKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A  AA+      + V + ++V LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIAALGYDPEALEVEIIQMVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     LDFD      QS ENPV+YVQYA+AR  SI RQA++     D D
Sbjct: 402 VDAVRYFFAMRSGDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQAEEQHISYDGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +++  E      E++L+  L ++P V+  A + + P+++  Y +DLAS  H  ++ 
Sbjct: 462 LALHHLVETE-----KEIELLKVLGDFPDVVAEAALKRMPHRVTAYAFDLASALHSFYNA 516

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N + T  RL LV AV   + + L +IGV +P +M
Sbjct: 517 E------KVLDLDNIEKTKARLALVKAVQITLQNALALIGVSAPEQM 557


>gi|16080786|ref|NP_391614.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221311696|ref|ZP_03593543.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316022|ref|ZP_03597827.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320933|ref|ZP_03602227.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325218|ref|ZP_03606512.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|2851477|sp|P46906|SYR_BACSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2224756|emb|CAB09703.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2636270|emb|CAB15761.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291486320|dbj|BAI87395.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 556

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 213/587 (36%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +K    K  + E+  +  +V+E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQMKDVLKEEIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK LA++Y    +N  E + L   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   ++     I   ++ L  +G+VYE          
Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++        
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P   +         E  L+  +  +P  +  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|229542451|ref|ZP_04431511.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326871|gb|EEN92546.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 558

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 218/588 (37%), Positives = 330/588 (56%), Gaps = 33/588 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +KE   K  +  +  +  IV+E+P++ AHG  + N AM L+R    
Sbjct: 1   MNIAEQMQETLKTEIKEAVMKTGLVAEADIPAIVLEKPKEKAHGDYAANIAMQLARTAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  I      ++ V IAG GFIN YL  +YL +++ SI+  G +YGR+  G
Sbjct: 61  APRQIAEAIVEHIDKSKTSIEKVEIAGPGFINFYLDNTYLTRLIPSILHDGADYGRSDAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+ +EFVSANPTG +H+GH R A VGD+L +++  +GYEVTREYYINDAG QI+ LA
Sbjct: 121 GGKKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGYEVTREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++P   Y G  +  +GK+LAD+Y  + ++  E+      + Y +
Sbjct: 181 LSVEARYFQAL-GIEKEMPADGYYGQDIIDLGKKLADEYGRKFVDTDEKTRYEFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M  ++ DL+   ++ D++ SE   ++     I +++  +  +G++YE          
Sbjct: 240 DYEMAKLKKDLEDFRVRFDVWYSETSLYK--SGKIDEMLKLMREKGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K+DG+YTY   D+AY K K++RGFD +I + G+
Sbjct: 288 ------KDGATWFRSTAFGDDKDRVLIKNDGTYTYLTPDIAYHKDKFDRGFDTLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+      + V + +LV LY++G  +KMSKR G  +T+R ++DEVG
Sbjct: 342 DHHGYIPRMKAAMEALGYNSDNLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRELIDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   LDFD      +S ENPV+Y QYA+AR  SI RQA +     D D
Sbjct: 402 LDATRYFFAMRSSDTHLDFDLDLAVSESNENPVYYAQYAHARICSILRQAVEKGFAPDTD 461

Query: 479 L-FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                +VI  E E D     ++  L E+P+VI  A   + P+++  Y+ +LA+ FH  ++
Sbjct: 462 AHADFSVIRSEKETD-----VLKKLGEFPQVIAEAAEKRIPHRITNYINELAANFHSFYN 516

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  ++ +   +   T  RL LV AV   + + L +IGV +P +M
Sbjct: 517 A------VKVIDPAHADATKARLALVKAVQITLKNALQLIGVSAPEKM 558


>gi|321313283|ref|YP_004205570.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019557|gb|ADV94543.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 556

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 213/587 (36%), Positives = 322/587 (54%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +K    K  + E+  +  +V+E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQMKDVLKEEIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK LA++Y    +N  E + L   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R DL+   +  D++ SE   ++     I   ++ L  +G+VYE          
Sbjct: 240 KYELDKLRKDLENFRVPFDVWYSETSLYQN--GKIDTALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++        
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P   +         E  L+  +  +P  +  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|126734650|ref|ZP_01750396.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715205|gb|EBA12070.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 579

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 262/586 (44%), Positives = 374/586 (63%), Gaps = 9/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  +R+ + L ++  +  +   +    + +E PRD +HG ++TNAAM+L++P  +
Sbjct: 1   MNLFADMRARVLDCLDQMVAEGTLPADLATAAVSVEPPRDASHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ + A++  DP +  V +AG GF+N+ L P   + ++ + +     YG++ +G+
Sbjct: 61  NPRVIADALAAKLLADPQIAVVEVAGPGFLNMRLVPEVWQGVVKAALSD-PAYGQSNLGQ 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+ +E+VSANPTGP+HVGH R AV GD LA L+ ++G++VT+EYYIND GAQ++ LA 
Sbjct: 120 GQKMMVEYVSANPTGPLHVGHTRGAVFGDALARLLDYAGFDVTKEYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +   P+G YPG YLK VGK L  K     ++  E+ WL  +++++ +
Sbjct: 180 SVYLRYLEA-HGQEVAFPDGTYPGDYLKPVGKALKAKVGDAYVDKGEQYWLEEIREFATE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L +  D F SE   +      I   I  L  +G +Y G L PPK K  
Sbjct: 239 AMMDLIRADLAQLGVVMDNFYSEKSLY--GTGLIEKAIAELDEKGLIYRGTLEPPKGKMP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDGS+TYFA D+AY   K +RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGSWTYFAPDIAYHYDKVQRGFDQLIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  ++V L +LV+LY++G P KMSKRAG F+TLR VVD+VG+
Sbjct: 356 HGGYVKRMKAAVSALSDGKVPLDVKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +  RF ML RKN   LDFDF KV EQSK+NPVFYV YAYAR  S   +A       D  L
Sbjct: 416 NVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVNYAYARVNSAVGKAGAFTDVSDVTL 475

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              ++     E   +EL +I  LAE+PR++E A    EP+++AFYLYDLAS FH  +  G
Sbjct: 476 ADVDLSGLTHE---AELAVIRKLAEWPRLVEIAARGHEPHRIAFYLYDLASDFHALYHQG 532

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  LRFVQ  + + T  ++ L+ AVA +I  GL I+GV    EM
Sbjct: 533 NADEALRFVQEGDSETTQAKIALIRAVAIVILHGLGILGVTPAEEM 578


>gi|254454733|ref|ZP_05068170.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198269139|gb|EDY93409.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 578

 Score =  606 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 258/586 (44%), Positives = 369/586 (62%), Gaps = 10/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +  +  +   +    + +E PRD +HG ++TNA M+L++P G+
Sbjct: 1   MNLFADIRATVIDCLDALTIEGVLPAGLDFANVTVEPPRDASHGDMATNAVMVLAKPSGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + A++  D  + S  IAG GF+NL L       ++S+++    ++G++ +G 
Sbjct: 61  KPRDIADALAAKLVADTRITSADIAGPGFLNLALDAGVWAGVVSAVLTD-ADFGKSNLGA 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E++SANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND GAQ++ LA 
Sbjct: 120 GKKMNVEYISANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL   G++L  +     +   EE WL  V+++   
Sbjct: 180 SVYLRYLEA-HGQAVTFEDGTYPGEYLIQAGQDLKARVGDAYVGQGEEVWLDDVREFGTD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL +L ++ D+F SE   +      I   I +L  +G +Y+G L PPK K  
Sbjct: 239 AMMALIREDLDSLGVKMDVFYSEKSLY--GTGLIEAAIADLKTKGLIYKGTLEPPKGKLP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFKSTEFGDDVDRPIQKSDGAWTYFAPDIAYHYDKISRGFDALIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+    ++V L +LV+LY+ G P KMSKRAG FI LR +V EVG 
Sbjct: 356 HGGYVKRMKAAVAALSDNAVPLDVKLTQLVKLYKKGEPFKMSKRAGTFIMLRDLVAEVGP 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +       D+
Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVMRKAVEAG----VDV 471

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +EL +   LAE+PR++E A    EP+++AFYLYDLAS  HG W+ G
Sbjct: 472 SDLAHADLSLATHPAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASELHGLWNRG 531

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q +N   T  ++ L+ +V+ +I+ GL I+GV    EM
Sbjct: 532 SDDASLRFLQVDNIPATQAKIALIKSVSVVISHGLGILGVTPAEEM 577


>gi|288554437|ref|YP_003426372.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545597|gb|ADC49480.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 556

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 208/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M        +LK  +K       +  + +L  +V+E P+D AHG  +TN AM L+R    
Sbjct: 1   MNSVEQMKQKLKEEIKAAVISAGLATEDVLPEVVLEAPKDKAHGDYATNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE + +++ K    +  + IAG GFIN +++ SYLR+I+ +++ +   YG   +G
Sbjct: 61  APRQIAEELTSQLDKEKASIQKIDIAGPGFINFFMNKSYLREIVPAVLSAKEAYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+ +EFVSANPTG +H+GH R A VGD L ++++ +GY+V REYYINDAG QIN LA
Sbjct: 121 NGEKIQVEFVSANPTGSLHLGHARGAAVGDALCNVLSKAGYDVEREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS+  RY QAL   D ++PE  Y G  +   GK LA+++  + +N  E +     + Y +
Sbjct: 181 LSLEARYFQAL-GQDKEMPEEGYRGQDIVDFGKALAEEHGDKYVNVSESERREFFRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q  +  I+ DLK   ++ D + SE   +  + + + ++++ L  +G  YE          
Sbjct: 240 QKELDKIKSDLKEFRVEFDNWFSETSLY--ESNKVIEVLETLDEKGETYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K+DG+YTY   D+AY + K +RGFD +I + G+
Sbjct: 288 ------QDGATWFRSTTYGDDKDRVLIKNDGTYTYLTPDIAYHQDKMQRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q  V + ++V LY+ G  +KMSKR G  +TLR ++DEVG
Sbjct: 342 DHHGYIPRMRAAIQALGYSPEQFEVQIIQMVSLYQGGEKVKMSKRTGKAVTLRDLMDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     LDFD      +S ENPVFYVQYA+AR  S+ RQ +++  D D +
Sbjct: 402 IDAVRYFFAMRSADSQLDFDMDLAVSKSNENPVFYVQYAHARVCSMLRQGEELGLDYDEN 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               + +  E E+D     L+  + ++P ++  A   + P+++  Y +DLAS  H  ++ 
Sbjct: 462 T-DLSAVSTEKEYD-----LLKAIGDFPAIVAEAAEKKMPHRITNYAHDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       + + ++  +  RL L+ A    I + L+++GV +P +M
Sbjct: 516 ER------VIDSEDQDKSKARLALMKATQITIQNALSLVGVSAPEKM 556


>gi|138896975|ref|YP_001127428.1| arginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196249795|ref|ZP_03148491.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166232790|sp|A4ITM9|SYR_GEOTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134268488|gb|ABO68683.1| Arginyl tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210671|gb|EDY05434.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 557

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 219/587 (37%), Positives = 332/587 (56%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +++   K  +   + L  +++E PR+ AHG  STN AM L+R    
Sbjct: 1   MNIVGQMKEQLKEEIRQAVGKAGLVAAEELPEVLLEVPREKAHGDYSTNIAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV +   +   V  + +AG GFIN Y+   YL  ++ +I+ +G  YG + +G
Sbjct: 61  PPRAIAEAIVEKFDAERVSVARIEVAGPGFINFYMDNRYLTAVVPAILQAGQAYGESNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGD+L++++A +G++VTREYYINDAG QI  LA
Sbjct: 121 KGEKVQVEFVSANPTGNLHLGHARGAAVGDSLSNILAKAGFDVTREYYINDAGKQIYNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   D  LPE  Y G  +  +GK+LAD+Y    ++  EE+ L   ++Y +
Sbjct: 181 KSVEARYFQAL-GTDMPLPEDGYYGDDIVEIGKKLADEYGDRFVHVDEEERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  I++DL A  +  D++ SE   +  +   I + +  L  +GY+YE          
Sbjct: 240 RYELDKIKNDLAAFRVPFDVWYSETSLY--ESGKIDEALSTLRERGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I V G+
Sbjct: 288 ------QDGATWFRSTAFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFTKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A  AA+      + V + ++V LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIAALGYDPEALEVEIIQMVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     LDFD      QS ENPV+YVQYA+AR  SI RQAK+     + D
Sbjct: 402 VDAVRYFFAMRSGDTHLDFDMDLAVAQSNENPVYYVQYAHARVSSILRQAKEHQLSYEGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +   +++  E      E++L+  L ++P V+  A + + P+++  Y +DLAS  H  ++ 
Sbjct: 462 VDLHHLVETE-----KEIELLKALGDFPDVVAEAALKRMPHRVTAYAFDLASALHSFYNA 516

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +  + T  RL LV AV   + + L +IGV +P +M
Sbjct: 517 E------KVLDLDQIEKTKARLALVKAVQITLQNALALIGVSAPEQM 557


>gi|148556836|ref|YP_001264418.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148502026|gb|ABQ70280.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 576

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 267/584 (45%), Positives = 373/584 (63%), Gaps = 13/584 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L+A F+ R+   L ++     +   +  R + +E PRD AHG L+TNAAM+L++P G +P
Sbjct: 4   LYASFADRIGAILDDLQASGALPAGLDRRNVAVEPPRDPAHGDLATNAAMVLAKPAGTNP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AELIV ++   P++ S  +AG GFIN+ L+    R  L+ I+ SG +YGR   G+GT
Sbjct: 64  RALAELIVPKLAALPEIASAEVAGPGFINVRLTEQSWRDELAGILSSGGDYGRTATGRGT 123

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ F+GY VTREYY+NDAGAQ+ TLA S 
Sbjct: 124 RVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEFAGYAVTREYYVNDAGAQVQTLARSA 183

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL     ++PEG+YPG YL  +G+ LA ++    +  PE  WL + ++ +V AM
Sbjct: 184 HLRYREAL-GETIEIPEGFYPGDYLIPIGQALAAEFGDAYVGKPESAWLDLFREKTVAAM 242

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR DL  L I+H++F SE    +     +   +D L  +G VYEG L PPK +    
Sbjct: 243 MDMIRADLALLGIEHEVFASEAAVQK--AGKVDVALDRLRGEGLVYEGTLEPPKGELPDD 300

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            +   +  LF++T  GDD DRP+ KSDG  TYF  DLAY   K E   D +I + G+DH+
Sbjct: 301 WE-PTEMTLFKATAFGDDSDRPVRKSDGGLTYFGTDLAYHAQKAET-ADMLIDIWGADHA 358

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G VKR++A   A++  K   +V L ++VRL R G P+KMSKR+G F+TL  VV EVG D 
Sbjct: 359 GTVKRIKAAVQALTGGKVAFDVKLVQMVRLLRGGEPVKMSKRSGSFVTLADVVREVGKDV 418

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR RS+ R+A +   DL      
Sbjct: 419 VRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARGRSLHRRAAEAGIDL------ 472

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  S  D  EL L+   A++PR++E A  A EP+++AFYLYDLA++FH  W+ G +
Sbjct: 473 -APAADLSLLDAEELALVKLAAQFPRIVEGAAQAHEPHRIAFYLYDLAAMFHALWNRGND 531

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P  RF+ ++  ++T  RL L  A+  II +GL ++GV +  EM
Sbjct: 532 DPARRFLLSDKPEITRARLALSDAIGQIIRNGLGVMGVTAAEEM 575


>gi|89053998|ref|YP_509449.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|109894997|sp|Q28S88|SYR_JANSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88863547|gb|ABD54424.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 575

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 265/586 (45%), Positives = 374/586 (63%), Gaps = 12/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFA+    +   +  +     +   + +  + +E PRD +HG ++TNAAM+L++P G+
Sbjct: 1   MTLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  +D+V +AG GF+NL LS    R +++  +  G  YGR+ IG 
Sbjct: 61  KPRDIAEALAAKLADDARIDTVDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+  +GY+VTREYYIND GAQ++ L  
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGYDVTREYYINDGGAQVDVLVR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  D    +G YPG YL  VG+ L DK     ++  E+ WL  +++++ +
Sbjct: 181 SVYLRYLEA-HGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL  L ++ D+F SE   +      I   ID+L  +G +YEG L PPK KT 
Sbjct: 240 QMMDLIRKDLALLGVEMDVFYSEKSLY--GTGRIEAAIDDLRGKGLIYEGYLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP++KSDGS+TYFA D+AY   K  RGFD +I V G+D
Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S     ++V L +LV+L R    +KMSKRAG F+TL  VV+ VG+
Sbjct: 357 HGGYVKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKRAGTFVTLADVVEMVGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFD  KV+EQSK+NPV+YVQYA+AR +S+ R+A++     D   
Sbjct: 417 DVTRFHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPAN 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D +EL L   +AEYPR+IE A    EP+++AFYL+DLAS FHG W+ G
Sbjct: 477 LN-------AVNDPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKG 529

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                LRF Q ++   T  +L L+ AVA +I++GL I+GV   ++M
Sbjct: 530 NAETHLRFFQDDDPSATSGKLCLISAVAIVISNGLGILGVTPVDQM 575


>gi|89068216|ref|ZP_01155626.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89046133|gb|EAR52191.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 580

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 261/586 (44%), Positives = 373/586 (63%), Gaps = 8/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +     +   +    + +E PRD AHG ++TNAAM+L++P G+
Sbjct: 1   MNLFADIRALVVDRLAALAADGTIPDGLDTANVAVEPPRDPAHGDMATNAAMVLAKPAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ + AR+  DP +    +AG GF+N+ L+    + ++  ++     YGR+ +G 
Sbjct: 61  KPRDIADALAARLADDPRIALAEVAGPGFLNIRLADGVWQDLVRQVLRDD-SYGRSDMGA 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+EFVS NPTGPMH+GH R A  GD LASL+ ++G+EVTREYYIND GAQ++ LA 
Sbjct: 120 GEKVNVEFVSVNPTGPMHLGHVRNAAFGDALASLLDYAGHEVTREYYINDGGAQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  +    +G YPG YL  VG+ L  +     ++  E+ WL  V+++S  
Sbjct: 180 SVYLRYLEA-HGREVRFEDGTYPGDYLVAVGEALKAEVGDAYVDQNEDVWLKHVREFSTD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM++I+DDL AL +  D + SE   +      I   I++L  +G +Y+G L PPK K  
Sbjct: 239 RMMQVIKDDLAALGVVMDNYFSEKSLY--GTGKIEGAIESLRDKGLIYKGTLEPPKGKVP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP++KSDG++TYFA D+AY   K ERGF  +I V+G+D
Sbjct: 297 EDWE-PREQTLFRSTAHGDDVDRPIMKSDGTWTYFAPDIAYHHDKLERGFTQLIDVLGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ +  ++V L +LV+LY++G P KMSKRAG F+TL  VVD VG 
Sbjct: 356 HGGYVKRMKAAVSAMSDGQVPLDVKLIQLVKLYKNGEPFKMSKRAGTFVTLADVVDMVGP 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A +    +D + 
Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAAEEG--IDTET 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +        SEL L   LAE+PR++E A    EP+++AFYLY+LAS  H  W+ G
Sbjct: 474 ATLAEVDLSGLTHESELALAKKLAEWPRLVEIAARTHEPHRVAFYLYELASELHALWNKG 533

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            E+  LRF+Q  +   T  ++ L  A A +I++GL I+GV   +EM
Sbjct: 534 NEDHSLRFLQEGDAAATQAKIALPRAAAIVISAGLGILGVTPVDEM 579


>gi|296331374|ref|ZP_06873846.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676361|ref|YP_003868033.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151489|gb|EFG92366.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414605|gb|ADM39724.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 556

 Score =  604 bits (1559), Expect = e-170,   Method: Composition-based stats.
 Identities = 209/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +K    K  + E+  +  +V+E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQMKDVLKEEIKSAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +V+   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEELVSHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK +A++Y    +N  E + L   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRIAEEYGDRFVNEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   ++     I   ++ +  +G+VYE          
Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEAIREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++        
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P   +         E  L+  +  +P  +  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 456 LKPAVDLDFSHIQSEKEYDLLKTIGSFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|254464840|ref|ZP_05078251.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685748|gb|EDZ46230.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 581

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 268/586 (45%), Positives = 378/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF D  S + + L  +  +  + + +    + +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFTDIRSLVIDSLTAMTGEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  +AG GF+NL+L+P   + +L S++ +G ++GR+ IG 
Sbjct: 61  KPRDIAEALAAKLAADERITSAEVAGPGFLNLWLAPGIWQGVLKSVLDAGTDFGRSGIGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LA+L+A++GY+VTREYYIND G Q++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALAALLAYAGYDVTREYYINDGGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +  D    +G YPG YL  VG+ L DK     L+ PEE WL  V++++  
Sbjct: 181 SVYLRYLEA-HGQDIAFADGTYPGDYLVPVGQALKDKAGDAYLDQPEEVWLAEVREFATD 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L I+ D+F SE   +      I   +  L  +G +Y+G+L PPK K  
Sbjct: 240 AMMALIREDLAQLGIEMDVFYSEKSLY--GTGKIEAALKALESKGLIYQGVLEPPKGKKP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +  R+Q LF+ST  GDDVDR + KSDG++TYFA D+AY   K ERGFD +I V G+D
Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGTWTYFAPDIAYHYDKVERGFDELIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S+ K  +++ LC+LV+LY+DG   KMSKRAG F+TLR VVD VG 
Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLYKDGQEFKMSKRAGTFVTLRDVVDAVGP 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RFM+L RKN +  DFD  K  EQSK+NPVFYVQYA AR  S  R+A++     D   
Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAEEQGIAADDAA 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +   S  D ++L +   LAE+PR++E A    EP+++AFYLYDLAS  HG +  G
Sbjct: 477 LNAADLSLVS--DPAQLAVAKKLAEWPRLVEVAARTHEPHRVAFYLYDLASELHGLYHMG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    LRFV  +++  T   L L  AV+ +I++GL I+GV+   EM
Sbjct: 535 KSQEGLRFVNESSQSATHANLALAKAVSVVISAGLGILGVKPAEEM 580


>gi|126725250|ref|ZP_01741092.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704454|gb|EBA03545.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 593

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 263/586 (44%), Positives = 378/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +  +  +   +    + +E PRD +HG ++TNAAM+L++    
Sbjct: 13  MNLFADIRALVIDSLTVMTDEGVLPSGLDFANVTVEPPRDASHGDMATNAAMVLAKAAKS 72

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  VD   +AG GF+NL LS +    + ++ + +G ++GR+ +G+
Sbjct: 73  KPRDIAEALAAKLAEDARVDLAEVAGPGFLNLRLSSAIWHNVTAATLANGTDFGRSNMGE 132

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 133 NKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 192

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RYQ+A +       +G YPG YL  VG+ L +K     L+  E  WL  V++YS +
Sbjct: 193 SVYLRYQEA-HGQKVAFEDGTYPGDYLIEVGQALKEKVGDAYLDQDESVWLQEVREYSTE 251

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL AL ++ D F SE   +      I   + +L  +G +Y+G L PPK K  
Sbjct: 252 AMMNLIREDLLALGVKMDHFYSEKSLY--GTGQIEAALADLDEKGLIYQGYLEPPKGKLP 309

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K  RG+D +I + G+D
Sbjct: 310 EDWEA-REQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGYDLLIDIFGAD 368

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  +A+S     +++ L +LV+L ++G P KMSKRAG F+TLR VVD+VG 
Sbjct: 369 HGGYVKRMKAAVSALSNGTVPLDIKLTQLVKLLKNGEPFKMSKRAGTFVTLRDVVDQVGR 428

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF+ML RKN   LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A D    +D   
Sbjct: 429 DVTRFVMLTRKNDAPLDFDFDKVVEQSKDNPVFYVQYAHARIKSVMRRATDAG--IDVSP 486

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +EL L   LAE+PR++E A  + EP+++AFYLY+L+S  H HW+ G
Sbjct: 487 AALAAADMSRASHDAELGLAKKLAEWPRLVEIAARSNEPHRIAFYLYELSSDLHAHWNKG 546

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q  + + T  ++ L+ AV+ +I++GL I+GVE   EM
Sbjct: 547 NDDVSLRFLQEGDSETTQAKIALIFAVSIVISAGLGILGVEPVEEM 592


>gi|85707713|ref|ZP_01038779.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689247|gb|EAQ29250.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 583

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 260/587 (44%), Positives = 368/587 (62%), Gaps = 14/587 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKK-ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L+A ++  ++  L+ +     + +      + +E PRD +HG L+TNAAM+L++P   +P
Sbjct: 7   LYAAYAGTIQTALQALVADGTLPEGTSFANVTLEPPRDPSHGDLATNAAMVLAKPAKTNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE I  ++K DP + S  IAG GF+NL L PS     L +I   G EYGR+ +G GT
Sbjct: 67  RALAEAIATKLKSDPTIVSAEIAGPGFLNLRLDPSAWLGELETITKLGDEYGRSSMGAGT 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VN+E+VSANPTGPMH+GHCR AVVGD LASL+  +G+EVTREYYINDAG Q++TLA S 
Sbjct: 127 TVNVEYVSANPTGPMHMGHCRGAVVGDALASLLELAGHEVTREYYINDAGGQVDTLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  N  ++PEGYYPG YL  +G+ LA +   +  + PEE+WLP  +  +V+ M
Sbjct: 187 HLRYREALGENIGEIPEGYYPGAYLIPIGEYLAQEVGEKYRDAPEEEWLPYFRAEAVEKM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +I+ DL  L I HD+F SE   H        +    L     VY+G+L  PK K   +
Sbjct: 247 MDLIKSDLALLGIHHDVFASEAALHA--AGKPDEAEKWLREHDLVYDGVLEAPKGKAPPE 304

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                +  LFRST  GDD DRP+ KSDG +TYF ADLAY   K     D +I + G+DH+
Sbjct: 305 DWEPVELPLFRSTKFGDDQDRPIKKSDGKWTYFGADLAYHMQK-AADADELIDIWGADHA 363

Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           G VKR++A  AA+SE K +    +V L ++V+L R G P+KMSKR+G+FIT+  +V+EVG
Sbjct: 364 GTVKRIKAAVAALSEGKGKPTPFDVKLVQMVQLMRGGEPVKMSKRSGNFITIADMVEEVG 423

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    ++FDF KV E SK+NPV+YVQYA+AR +S  R+A D    +   
Sbjct: 424 KDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVWYVQYAHARIQSTIRKAADE-EGVTPS 482

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               N +  +      E+ LI   A++PR +E+A  A+EP+++AFYLYDLA+  +  +S 
Sbjct: 483 TDALNQLGSD------EIALIRRAAQFPREVESAAKAREPHRIAFYLYDLATDLNSFYSL 536

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G   P  RF+  +++ LT  RL L  A+  ++ +GL ++GVE+ + M
Sbjct: 537 GNTEPEKRFILKHDKGLTAARLFLASAIGQVLRNGLRVLGVEAVDRM 583


>gi|294083991|ref|YP_003550748.1| arginyl-tRNa synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663563|gb|ADE38664.1| Arginyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 572

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 267/586 (45%), Positives = 387/586 (66%), Gaps = 15/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  F ++    + ++     + K++ + R+V E PRD  HG L+TNAAM+L++   +
Sbjct: 1   MNIFTYFETQFAALITQLGASGHITKELDISRVVFELPRDPDHGDLATNAAMVLAKSAAM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A L+   +K    VD+V IAG GFINL ++P    + +S I+ +G +YGRN  G+
Sbjct: 61  KPRELAVLLSEELKKIDGVDAVEIAGPGFINLQINPLLWAREISDILTAGYDYGRNNAGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGP+H  H R AV+GD LA LMAFSG++VT+EYY+NDAG Q++ LA 
Sbjct: 121 GANVNIEYVSANPTGPLHAAHARGAVIGDALAGLMAFSGWQVTKEYYVNDAGGQVDILAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +AL  +  ++  G YPG YLK VG +LA KY  +    PE +WL   + +SV 
Sbjct: 181 SVYLRYCEAL-GDTIEIEAGLYPGAYLKDVGTKLAAKYGDKFHKRPEAEWLSTFRLFSVS 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +M+ I+DDL+AL IQ D F SE +    +   ++  ID L   G+VY G+L PPK K  
Sbjct: 240 DIMEGIKDDLQALGIQMDRFSSERELV--ESGAVQKAIDKLKANGHVYTGVLQPPKGKEP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+QLLFRST  GDD DRPL KS+GS+TYFA+D++Y   K ER    +I ++G D
Sbjct: 298 EDWE-PREQLLFRSTEFGDDTDRPLQKSNGSWTYFASDVSYHFDKLERTKGPLIDILGVD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+KR+ A   A+S +K  +++  C+LV L  +G P+KMSKRAG+F+T+R V+D VGS
Sbjct: 357 HGGYLKRMTAAVEAISGQKNMLDIRFCQLVNLMENGKPVKMSKRAGNFVTVRDVIDAVGS 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D +RF+ML R+N + LDFD+ KV EQS++NPVFYVQYA+AR  S+ RQ   +  + D  +
Sbjct: 417 DVIRFIMLTRRNDQTLDFDYAKVTEQSRDNPVFYVQYAHARACSVLRQIGKVPHEADLSV 476

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       D +EL ++  LA +P+++E+A  A E +++AF+L DLAS FH  W+ G
Sbjct: 477 LK----------DPAELAVLKMLASWPKLVESAARAHEAHRIAFFLVDLASSFHSLWNAG 526

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RENP LRF+  +N+ +T  RLQLV A + +I +GLN++ +++ +EM
Sbjct: 527 RENPELRFILDDNQTITAARLQLVKATSLVIATGLNVLSIKALDEM 572


>gi|241762271|ref|ZP_04760352.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752688|ref|YP_003225581.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241373174|gb|EER62804.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552051|gb|ACV74997.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 574

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 269/586 (45%), Positives = 374/586 (63%), Gaps = 13/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F+++L + L   + +  +   +   R+ +E PRD +HG L+ NAAM+L++    
Sbjct: 1   MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +V  +     V+SV IAG GFIN+ L+    RK L+ I+  G +YGR+ IG+
Sbjct: 61  APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA 
Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL   +  +PEG YPG YL  VGK LA+KY    LN PE +WL + ++ +V 
Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  L I HD F SE   H+     ++  ID L ++G +Y+G+L  PK +T 
Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHK--AGIVQKAIDKLEKEGLIYKGVLEAPKGETP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +  LFR+T  GDD DRP+ KSDGSYTYF ADLAY   K     D ++ + G+D
Sbjct: 298 EDWE-PVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAAT-ADQLVDIWGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+G VKR++A  AA+++ K  ++V L ++V L R G P+KMSKR+G+F+TL  VV EVG 
Sbjct: 356 HAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVGR 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+       L  + 
Sbjct: 416 DVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR-------LVSEN 468

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D  EL LI   A++PR+IE A +A EP+++ FYL+ LA+ FH  W+ G
Sbjct: 469 ITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAHEPHRIVFYLFTLAADFHSLWNKG 528

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP  RF+  +N   T  RL L  AV  +I +GL ++GV +  EM
Sbjct: 529 NDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574


>gi|239828630|ref|YP_002951254.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511648|sp|C5D9R0|SYR_GEOSW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|239808923|gb|ACS25988.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 556

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 207/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      R+K  +K  +       ++ +  +++E PR+ AHG  STN AM L+R    
Sbjct: 1   MNIVEQMKERIKEEIKRAVVSAGFAAEEEVPEVILEVPREKAHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  + K    ++ + IAG GFIN Y+   YL +++ +I+ +G  YG   +G
Sbjct: 61  PPRAIAEEIVQHMDKTKASIEKIDIAGPGFINFYMDNRYLTELIPTIIQAGASYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  LA
Sbjct: 121 KGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   D ++PE  Y G  +  +GK+LA+++  + ++  E++ L   ++Y +
Sbjct: 181 KSVEARYFQAL-GIDKEMPEDGYYGEDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              ++ I+ DL    +  D++ SE   +      I + +  L  +G++YE          
Sbjct: 240 NYELEKIKKDLADFRVTFDVWYSETSLYT--SGKIDETLALLRERGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G+
Sbjct: 288 ------KDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHQDKLRRGFTKIINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+      + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   LDFD      QS ENPV+YVQYA+AR  SI RQ +++    + D
Sbjct: 402 LDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L        +      E++L+  L E+P  +  A I + P+++  Y+++LAS  H  ++ 
Sbjct: 462 L------QLDYIQTEKEIELLKKLGEFPSAVSEAAIKRMPHRITGYVFELASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N + +  RL L+ AV   + + L +IGV +P +M
Sbjct: 516 E------KVLDPENIEKSRARLALMKAVQITLQNALALIGVSAPEKM 556


>gi|85373141|ref|YP_457203.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84786224|gb|ABC62406.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 581

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 258/587 (43%), Positives = 366/587 (62%), Gaps = 16/587 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A F++++   L  ++ +  +   +  R + +E PRD +HG L+TNAAM+L++    +P
Sbjct: 7   IHAAFAAKVDAVLSALEAEGTLPAGVERRNVTVEPPRDPSHGDLATNAAMVLAKQAATNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE IV  ++ DPD+    IAG GFINL L+       L +I   G  YGR+ +G+G 
Sbjct: 67  RALAEKIVEHLERDPDITETAIAGPGFINLRLADRAWLGELEAIAALGEGYGRSQMGEGK 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G+EVTREYY+NDAG Q++TLA S 
Sbjct: 127 RVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEYAGHEVTREYYVNDAGGQVDTLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +   +P G YPG YLK VG+ LA +      + PE++WLPI +  +V+ M
Sbjct: 187 HLRYREALGEDIGAIPGGLYPGDYLKPVGEYLAQELGDRFKDAPEDEWLPIFRAEAVEKM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR DL  L I HD+F SE                 L   G VY+G+L  PK K  + 
Sbjct: 247 MDVIRADLALLGIHHDLFSSEAALQA--AGKPEQAEAWLREHGLVYDGVLEQPKGKVIED 304

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            +     L FRST  GDD DRP+ KSDG +TYF ADLAY   K E   D +I + G+DH+
Sbjct: 305 WEPVELPL-FRSTKFGDDQDRPIRKSDGKWTYFGADLAYHMQKAEE-ADALIDIWGADHA 362

Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           G VKR++A  AA+SE + +    +V L ++V+L R G P+KMSKR+G+FIT+  +V+EVG
Sbjct: 363 GTVKRIKAAVAALSEGQGKPIPFDVKLVQMVQLMRAGEPVKMSKRSGNFITIADMVEEVG 422

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S  R+A+    +   +
Sbjct: 423 KDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARIHSTLRKARAEGIEPSTE 482

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              +            EL LI   A++PR++E A  A+EP+++AF+LYDLAS FH  ++ 
Sbjct: 483 AIAQ--------LGEEELGLIKQAAQFPRIVEAAAAAREPHRIAFFLYDLASAFHSFYNL 534

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G +NP  R + A +  L+  RL L+  +  +I +GL ++GVE+  EM
Sbjct: 535 GNDNPSKRVILAQDPALSAARLFLIDTIGQVIRNGLTLLGVEAVEEM 581


>gi|212640560|ref|YP_002317080.1| arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226701372|sp|B7GMJ3|SYR_ANOFW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212562040|gb|ACJ35095.1| Arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 556

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 322/587 (54%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +KE   +  V  +  +  +++E P+D AHG  STN AM L+R    
Sbjct: 1   MNIVEQMKQKLKEEIKEAVIRSGVATEADVPSVILETPKDKAHGDYSTNVAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV     +      V IAG GFIN Y+   YL +++ +I+ +G  YG   +G
Sbjct: 61  APRMIAEDIVRHFNGEAVFVKKVDIAGPGFINFYMDNRYLTELVPAILQAGDAYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  LA
Sbjct: 121 QGQKVQVEFVSANPTGSLHLGHARGAAVGDSLCNILKKAGFDVTREYYINDAGNQIANLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL     D+PE  Y G  +  +GK+LA+++  + +   E++ L + ++Y +
Sbjct: 181 KSVEARYFQAL-GIKKDMPEDGYFGEDIIELGKKLAEEHGDKFVALDEQERLQLFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M  I+ DL    +  D++ SE   +      I   ++ L  +G++YE          
Sbjct: 240 AFEMDKIKKDLADFRVTFDVWYSETSLYHN--GKIDKALETLREKGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DG+YTY   D+AY + K ERGF+ +I + G+
Sbjct: 288 ------QDGATWFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLERGFEKIINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A  AA+      + V + +LV LY++G  ++MSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIAALGYDPDVLEVEIIQLVSLYQNGEKVRMSKRTGKAVTLRDLMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   LDFD      QS ENPV+Y QYA+AR  S+ RQ ++     D D
Sbjct: 402 LDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYAQYAHARVCSMLRQGEEQGWRYDGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L          E    E+ L+  L E+P  +  A + + P+++  Y++DLAS  H  ++ 
Sbjct: 462 L------SFTYELAEKEIDLLKKLGEFPSAVAEAAVKRSPHRMTNYIFDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A N + +  RL L+ AV   + + L ++GV +P +M
Sbjct: 516 E------KVLDAANVEKSRARLALMKAVQITLKNALALVGVHAPEKM 556


>gi|319408659|emb|CBI82314.1| Arginyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 534

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 288/537 (53%), Positives = 395/537 (73%), Gaps = 6/537 (1%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M+L++ +GL+P  +AE I+  +K D  ++ + +AG GFIN+ L+ S+ + +L S++ +GI
Sbjct: 1   MVLAKSVGLNPRILAEKIIELLKNDQSIECINVAGPGFINIKLTRSFWQDVLKSMIEAGI 60

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            YGR+ IG+G +VN+E+VSANPTGPMHVGHCR AV+GD L++L+ F GY VT+EYYINDA
Sbjct: 61  AYGRSQIGQGKRVNVEYVSANPTGPMHVGHCRGAVIGDVLSNLLQFVGYNVTKEYYINDA 120

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G Q+  LA SV  RY+QAL    +++PEG YPG YL  +G+ L  ++  +LL   + + L
Sbjct: 121 GGQVEVLAHSVLLRYRQALGQTINEIPEGLYPGEYLIPLGQSLVQEFGDQLLTIDKSEAL 180

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            IVK+ ++ AMM +IRDDL ALNIQHD+F SE   +  +   IR+ I++L   GY+Y+GI
Sbjct: 181 SIVKERAIDAMMAMIRDDLSALNIQHDVFFSERMLYADNAQAIRNAINDLTLNGYIYKGI 240

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +   +Q LFRST VGDD DR L+KS+GSYTYFAAD+AYF+ K+ R FD
Sbjct: 241 LSPPKGKILEDWE-PHEQTLFRSTDVGDDQDRVLIKSNGSYTYFAADIAYFRDKFNRHFD 299

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIY++G+DH+GYVKRLEAVA A+S  KA++ V LC+LV+L+R+G P++MSKR G F+TL
Sbjct: 300 EMIYILGADHAGYVKRLEAVAKAISGDKAKLAVFLCQLVKLFRNGQPVRMSKREGSFVTL 359

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R VV+EVG D VRFMML+RK    LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++
Sbjct: 360 RDVVEEVGCDPVRFMMLYRKCEAPLDFDFTKVTEQSKDNPIFYVQYASARCHSVFRQAQE 419

Query: 471 IFPDLDFDLFPRNVIP--QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               L  D    N++    +   D SE+ LI  LAEYPR+IE A I +EP++LAFYLYDL
Sbjct: 420 ---SLHIDNLSSNIMIPYLDKLIDDSEISLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDL 476

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS FHGHW+ G +NP LRF +  +++L++ RL L+ AV +I++SGL I+G+++  EM
Sbjct: 477 ASNFHGHWNKGNDNPDLRFTKLEDKELSLARLGLIQAVINILSSGLQIVGIKASTEM 533


>gi|307294518|ref|ZP_07574360.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878992|gb|EFN10210.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 575

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 265/586 (45%), Positives = 365/586 (62%), Gaps = 13/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F++ L   L  ++    +   +  + + +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDPSHGDLATNAAMVLAKPAGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+ IVA ++   +V+   IAG GFINL L+ +  R  L++I     EYGR+  G+
Sbjct: 61  NPRALAQKIVAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHAEAEEYGRSSTGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMH+GHCR AVVGD LA+L+   G++V REYYINDAG Q++ LA 
Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +   +PEG YPG YL  VG+ LA +Y  + +  PE +WL   +  +V 
Sbjct: 181 SAHVRYREALSEDVGGIPEGLYPGDYLVPVGQALAAEYGDKYVGAPESEWLASFRTKAVA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L I HDIF SE +               L     VY+G+L  PK +T 
Sbjct: 241 AMMDMIRSDLALLGIHHDIFSSEAELQA--AGKPEAAEKWLREHDLVYDGVLEAPKGETP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +     L FRST  GDD DRP+ KS+GS+TYF AD+AY   K +   D +I + G+D
Sbjct: 299 EDWEPVELPL-FRSTKFGDDQDRPIKKSNGSWTYFGADMAYHYQKAQT-ADQLIDIWGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G VKR++A  AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL  VV EVG 
Sbjct: 357 HGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREVGK 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A++   DL    
Sbjct: 417 DVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIDLP--- 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P  S   T EL L+    ++PRV+E A  A+EP+++AFYL DLAS FH  W+ G
Sbjct: 474 -----APDLSRLGTDELGLVKLAVQFPRVVEGAASAREPHRIAFYLNDLASAFHSWWNLG 528

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP+ R +  ++   T  RL L   +  II +GL ++GV +  EM
Sbjct: 529 NDNPQARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574


>gi|283856343|ref|YP_162578.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775340|gb|AAV89467.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 574

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 269/586 (45%), Positives = 374/586 (63%), Gaps = 13/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F+++L + L   + +  +   +   R+ +E PRD +HG L+ NAAM+L++    
Sbjct: 1   MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE +V  +     V+SV IAG GFIN+ L+    RK L+ I+  G +YGR+ IG+
Sbjct: 61  APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA 
Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++AL   +  +PEG YPG YL  VGK LA+KY    LN PE +WL + ++ +V 
Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IRDDL  L I HD F SE   H+     ++  ID L ++G +Y+G+L  PK +T 
Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHK--AGIVQKAIDKLEKEGLIYKGVLEAPKGETP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +   +  LFR+T  GDD DRP+ KSDGSYTYF ADLAY   K     D ++ + G+D
Sbjct: 298 EDWE-PVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAAT-ADQLVDIWGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+G VKR++A  AA+++ K  ++V L ++V L R G P+KMSKR+G+F+TL  VV EVG 
Sbjct: 356 HAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVGR 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+       L  + 
Sbjct: 416 DVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR-------LVSEN 468

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  D  EL LI   A++PR+IE A +A EP+++ FYL+ LA+ FH  W+ G
Sbjct: 469 ITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAPEPHRIVFYLFTLAADFHSLWNKG 528

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NP  RF+  +N   T  RL L  AV  +I +GL ++GV +  EM
Sbjct: 529 NDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574


>gi|322419462|ref|YP_004198685.1| arginyl-tRNA synthetase [Geobacter sp. M18]
 gi|320125849|gb|ADW13409.1| arginyl-tRNA synthetase [Geobacter sp. M18]
          Length = 554

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 210/584 (35%), Positives = 325/584 (55%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + +   ++       +   ++  I +E+P    HG  +TN AM +++     P 
Sbjct: 1   MKEQLRACILKGIEGCFADGTLTSGVVPAINVEKPAHAEHGDFATNVAMQMAKQERKAPR 60

Query: 63  TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +AE++V ++      ++S+ IAG GFIN ++  S  RK+LS I  +G  YG++ +G G 
Sbjct: 61  AVAEILVQKLAGASELIESLEIAGPGFINFFIKDSAWRKVLSEIDRAGDRYGKSSVGAGK 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+GH R A  GD +ASL+  +G++V REYYINDAG Q+NTL LS 
Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVASLLCSAGFDVQREYYINDAGNQMNTLGLSG 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RYQ+ L     D PE  Y G Y+K + ++   ++    LN P+E+            +
Sbjct: 181 LLRYQELL-GQKIDFPENCYQGDYIKDIARDAIARHGDRFLNAPQEEGGAFFAKMGGDLI 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K I +DL+   I+ D + SE      D   +   I  +  +G++YE             
Sbjct: 240 LKGIDEDLQDFGIRFDNWFSEQSLF--DEGKVTSAIAEMQEKGHIYEL------------ 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L F++T  GDD DR +++S+G  TYFA+D+AY + K+ RGFD +I V G+DH 
Sbjct: 286 ----DGALWFKTTAFGDDKDRVVVRSNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHH 341

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV RL++V   +  K   + ++L +LV L RDG P+ MS R+G+F+TL+ VVDEVG D+
Sbjct: 342 GYVPRLKSVVQGLGRKPEDLGIILVQLVSLLRDGQPVAMSTRSGEFVTLKEVVDEVGRDA 401

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF  L R++   LDFD    K QS +NPV+YVQYA+AR +SIF  A++      FD   
Sbjct: 402 ARFFFLMRRSDSQLDFDLELAKRQSSDNPVYYVQYAHARIKSIFDTARERGVAPAFDGVR 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ++    +     + LI  L+ YP ++E A +  EP+++ +YL +LA  FH  ++  R 
Sbjct: 462 LELLESADD-----MSLIKKLSLYPEILEGAAVNFEPHRITYYLQELAGEFHSFYNKSR- 515

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +     +LT  RL L+H VA  + + L ++G+ +P  M
Sbjct: 516 -----VITPEEPELTQARLFLLHCVAITLKNALTVLGISAPERM 554


>gi|52082258|ref|YP_081049.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52787649|ref|YP_093478.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319648132|ref|ZP_08002349.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81384315|sp|Q65DS9|SYR_BACLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52005469|gb|AAU25411.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52350151|gb|AAU42785.1| ArgS [Bacillus licheniformis ATCC 14580]
 gi|317389767|gb|EFV70577.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 556

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 213/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +KE   K  + E+  +  +V+E P+D +HG  STN AM L+R    
Sbjct: 1   MNIVEQMKDVLKQEIKEAVMKAGLAEESEIPEVVLEVPKDKSHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    +D + IAG GFIN Y++  YL K++ +++ +G  YG   IG
Sbjct: 61  APRNIAEEIVASFDKGKASIDKLDIAGPGFINFYMNNQYLTKLIPAVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTG +H+GH R A VGD+L +++  +GYEV+REYYINDAG QIN LA
Sbjct: 121 GGERVQVEFVSANPTGNLHLGHARGAAVGDSLCNVLEKAGYEVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D  +PE  Y G  +K +G++LAD++    ++  E + L   ++Y +
Sbjct: 181 LSVEARYFQAL-GKDKPMPEDGYHGEDIKEIGQKLADEFGDRFVHEEESERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R+DL+   +  D++ SE   ++     I   ++ L  +G++YE          
Sbjct: 240 KYELGKLREDLENFRVPFDVWYSETSLYQN--GKIDQALEALREKGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DGSYTY   D+AY K K +RGF  +I V G+
Sbjct: 288 ------EDGATWFRSTAFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFQKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + +LV LY++G  +KMSKR G  +T+R ++DEVG
Sbjct: 342 DHHGYIPRMKAAIEALGYDKETLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++     + +
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEKGISFEGN 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L               E  L+  +  +P  + +A   + P+++  Y+++LASV H  ++ 
Sbjct: 462 L------DLTKIGSEKEYDLLKVIGSFPEAVADAAEKRIPHRITNYIFELASVLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   + + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVLDPADEEKSRARLSLMKATQITLNNALKLIGVSAPEKM 556


>gi|94496953|ref|ZP_01303527.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423629|gb|EAT08656.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 575

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 265/586 (45%), Positives = 370/586 (63%), Gaps = 13/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F++ L   L  ++    +   +  + + +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MSLYTRFTAHLDAVLDALEADGVLPAGLNRKPVTVEPPRDSSHGDLATNAAMVLAKPAGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE IVA+++   +V S  IAG GFIN+ L+ +  R  L++I   G  YGR+ +G+
Sbjct: 61  NPRALAEAIVAKLQALDEVTSAAIAGPGFINMTLTDATWRAELAAIHADGANYGRSALGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G++V REYYINDAG Q++ LA 
Sbjct: 121 GVSVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEYAGHKVIREYYINDAGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL  +   +PEG YPG YL  VG+ LA +Y       PE  WL   + ++V 
Sbjct: 181 SAHLRYREALGEDVGAIPEGLYPGDYLVPVGQALAAEYGDRFAGAPESDWLVTFRTFAVA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM +IR DL  L I HDIF SE +          +    L     VY+G+L  PK +  
Sbjct: 241 KMMDMIRSDLALLGIHHDIFASEAELQA--AGKPDEAEAWLRAHDLVYDGVLEAPKGELP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +     L FRST  GDD DRP+ KS+G++TYF AD+AY   K +   D +I + G+D
Sbjct: 299 DDWEPVELPL-FRSTKFGDDQDRPIKKSNGAWTYFGADMAYHFQKAQ-SADQLIDIWGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+G VKR++A  AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL  VV EVG 
Sbjct: 357 HAGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVQEVGK 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A++    L    
Sbjct: 417 DVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIALP--- 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P  S   T+EL L+   A++PRV+E A  A+EP+++AFYL DLAS FHG W+ G
Sbjct: 474 -----APDLSLLGTAELSLVKLAAQFPRVVEGAAQAREPHRIAFYLNDLASAFHGWWNMG 528

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++P  R ++A++  LT  RL L   +  II +GL ++GV +  EM
Sbjct: 529 NDDPGARVIRADDPALTSTRLSLAQGIGQIIRNGLALMGVAALTEM 574


>gi|311032050|ref|ZP_07710140.1| arginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 556

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 216/587 (36%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      RLK  +K    K  +  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNIVEQVQERLKEEIKASVLKAGLATEEQIPAVVLETPKDKTNGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV         ++ + IAG GFIN Y+  +YL  ++ +I+ +G +YGR+ IG
Sbjct: 61  APRMIAEEIVKNFDQSKASIEKIDIAGPGFINFYMDNAYLTDLIPTILKAGTDYGRSNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K+N+EFVSANPTG +H+GH R A VGD+L +++  +GYEVTREYYINDAG QIN LA
Sbjct: 121 KGEKINVEFVSANPTGDLHLGHARGAAVGDSLCNVLDKAGYEVTREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +G+ +AD++    +N  EE      ++Y +
Sbjct: 181 LSVEARYFQAL-GQDKEMPEDGYHGKDIIGIGQAIADEFGDRFVNESEEDRRSFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  MK ++ DL+   ++ D++ SE   +      I + +  L  QG++YE          
Sbjct: 240 KYEMKKLQQDLEEFRVRFDVWYSETSLYNN--GKIDEALATLREQGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD +R L+K+DGSYTY   D+AY + K +RG D +I + G+
Sbjct: 288 ------EEGATWFRSTEFGDDKNRVLIKNDGSYTYLTPDIAYHQDKLKRGHDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + +LV L+++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYGKDALEVEIIQLVHLFQNGEKMKMSKRTGKAVTMRDLMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     LDFD      QS ENPVFY QYA+AR  S+ RQ ++    L+ +
Sbjct: 402 LDAVRYFFAMRSGDTHLDFDMDLAVSQSNENPVFYAQYAHARICSMLRQGEEQGLSLEGN 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                    E      E+ L+  L EYP  +  A   + P+++  Y ++LAS  H  ++ 
Sbjct: 462 FA------LEHISSEKEIDLLKKLGEYPLAVAEAAEKRIPHRITNYTFELASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A+N + +  RL L+ AV   +   L +IGV +P +M
Sbjct: 516 E------KVLDADNMEKSKARLGLMKAVQITLQDALKLIGVSAPEKM 556


>gi|319650937|ref|ZP_08005072.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317397293|gb|EFV77996.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 555

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +K+   K  +  ++ +  +++E P++ AHG  STN AM L+R    
Sbjct: 1   MNIVEQVQDKLKQEIKDAVVKAGLAAEEQIPDVILEIPKEKAHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE ++A        ++ + IAG GFIN Y++ SYL  ++ +++ +G +YG   +G
Sbjct: 61  APRMIAEELIAHFDSSKASIEKIEIAGPGFINFYMNNSYLTDLIPAVLEAGDQYGETTVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EFVSANPTG +H+GH R A VGD+L +++  +GYEV+REYYINDAG QIN LA
Sbjct: 121 NSQKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGYEVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++P   Y G  +  +GK+LAD+Y  + ++  E++     ++Y +
Sbjct: 181 LSVEARYFQAL-GLEKEMPADGYHGEDIIGIGKKLADEYGDKYVHADEKERFDFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M  ++ DL+   +  D++ SE   +      I   +  L   G++YE          
Sbjct: 240 KYEMAKLKQDLEDFRVPFDVWYSETSLYNN--GKIDTALQALKDNGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGSYTY   D+AY K K ERGF+ +I + G+
Sbjct: 288 ------EEGATWFRSTAFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   +  + V + +LV LY++G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDREALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD      QS ENPV+Y QYA+AR  SI RQ ++     +  
Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARISSILRQGEEQGMSAEAA 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            +              E+ ++  + E+P+ +  A   + P+++  Y+Y+LAS FH  ++ 
Sbjct: 462 DYSLIQA-------EKEIDVLKKIGEFPQAVGEAAQKRMPHRITNYIYELASSFHSFYNA 514

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A N + T  RL L+ AV + + + L +IGV +P +M
Sbjct: 515 E------KVLDAENPERTKARLALIKAVQTTLKNALKLIGVSAPEKM 555


>gi|294012801|ref|YP_003546261.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676131|dbj|BAI97649.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 575

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 268/586 (45%), Positives = 368/586 (62%), Gaps = 13/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F++ L   L  ++    +   +  + + +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDASHGDLATNAAMVLAKPAGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I A ++   +V+   IAG GFINL L+ +  R  L++I V   +YGR+  G 
Sbjct: 61  NPRALAEKIAAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHVEAEDYGRSSTGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+E+VSANPTGPMH+GHCR AVVGD LA+L+   G++V REYYINDAG Q++ LA 
Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL     ++PEG YPG YL  VG+ LA +Y    +  PE +WL + +  +V 
Sbjct: 181 SAHVRYREALGETVGEIPEGLYPGDYLVPVGQALAAEYGDRYVGAPEGEWLVLFRTKAVA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM++IR DL  L I HDIF SE +               L     VY+G+L  PK +T 
Sbjct: 241 AMMEMIRSDLALLGIHHDIFSSEAELQA--AGKPEAAEKWLREHDLVYDGVLEAPKGETP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +     L FRST  GDD DRP+ KS+GS+TYF AD+AY   K +   D +I + G+D
Sbjct: 299 EDWEPVELPL-FRSTRFGDDQDRPIRKSNGSWTYFGADMAYHYQKAQT-ADQLIDIWGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G VKR++A  AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL  VV EVG 
Sbjct: 357 HGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREVGK 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A++   DL    
Sbjct: 417 DVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGMDLP--- 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P  S   T EL L+   A++PRV+E A +A+EP+++AFYL DLAS FHG W+ G
Sbjct: 474 -----APDLSRLGTEELGLVKLAAQFPRVVEGAALAREPHRIAFYLNDLASAFHGWWNLG 528

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +NPR R +  ++   T  RL L   +  II +GL ++GV +  EM
Sbjct: 529 NDNPRARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574


>gi|15616370|ref|NP_244675.1| arginyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139930|sp|Q9K6C1|SYR1_BACHD RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|10176433|dbj|BAB07527.1| arginyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 556

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 200/587 (34%), Positives = 324/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M        +L+  +   +        + +  +++E P++ AHG  +TN AM L+R    
Sbjct: 1   MNKMEQMKQQLREEIVVAVKAAGLATDETIPEVILETPKEKAHGDFATNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE + A++      ++ + IAG GFIN +L  SYLR+++ +++ +   YG   +G
Sbjct: 61  APRLIAEELTAKLDRKRAAIEKIEIAGPGFINFFLDNSYLREMIPTVLRAESAYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGD L +++A +GY+V+REYYINDAG QIN LA
Sbjct: 121 KGKKVQVEFVSANPTGNLHLGHARGAAVGDALCNILAKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS+  RY QAL   + D+PE  Y G  +   GK+LA+ +  + ++   E+ L   ++Y +
Sbjct: 181 LSLEARYFQAL-GMEKDMPEDGYHGEDIIQFGKDLAETHGDKFVHESSEERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I+ DL+   +  D + SE   +      +   ++ L  +G  YE          
Sbjct: 240 KRELEKIKSDLEEFRVPFDNWYSETSLYT--TGKVEKTLNVLKEKGKTYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L FRST  GDD DR L+K+DGSYTY   D++Y + K+ RGF+ +I + G+
Sbjct: 288 ------QDGALWFRSTEYGDDKDRVLVKNDGSYTYLTPDISYHEDKFLRGFEKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K Q++V + ++V L+++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKDQLDVQIIQMVSLFQNGEKVKMSKRTGKAVTLRDLMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD      +S ENPV+YVQYA+AR  S+ R+ K++    D  
Sbjct: 402 IDATRYFFAMRSADSHLDFDMDLAVSKSNENPVYYVQYAHARVCSMLRKGKELGLSFDES 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +          E  L+  + E+P V+  A   Q P+++  Y+++LAS  H  ++ 
Sbjct: 462 TDLSPIAS------EKEYDLLKKIGEFPEVVAEAAQKQMPHRITNYVHELASTLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       +   N + +  RL L+ A    + + L+++GVE+P  M
Sbjct: 516 EQ------VINPENDEQSKARLALMKATQVTLKNALSLVGVEAPERM 556


>gi|329114103|ref|ZP_08242867.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696642|gb|EGE48319.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 599

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 274/600 (45%), Positives = 378/600 (63%), Gaps = 23/600 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  +   +   ++E+     V ++ L R+ +   RD AHG ++TNAA++L++     P 
Sbjct: 5   VFQRYRQHVLAIVQELLP--NVPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPS 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +VA ++    V SV  AG GF+N+ L P  +R +L +++ +G  YG +  GKG +
Sbjct: 63  DIAADLVAALQKVDGVASVAAAGPGFVNITLKPDVMRSVLPAVLRAGEAYGASQAGKGLR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+LMA +G+ VT+E+YINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLMAKAGFAVTKEFYINDAGAQVKALAWAAY 182

Query: 183 WRYQQAL-----YNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLN---------FPE 226
           WRY QAL      ++ S L  G   Y G YL  VG ELA +Y ++L            PE
Sbjct: 183 WRYLQALGTKMTQDDFSALAPGGLQYQGEYLIPVGMELAAEYGNKLTETDADGAPLPAPE 242

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGY 285
             WL  V+ ++V  M+  I++DL AL + HD+F SE +  HRG        I  L +QG 
Sbjct: 243 ATWLETVRGFAVAHMLTAIKEDLAALGVHHDVFTSEAEVLHRG---VTDAAISKLEQQGL 299

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +YEG+L PPK K  +  + +R+QLLFRST  GDDVDRPL KSDG+ TYFA D+ Y   K 
Sbjct: 300 LYEGVLEPPKGKLPEDWE-EREQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKV 358

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            RG   MI V G+DH GYVKR++A   A++     + V+LC++V + RDG P+KMSKRAG
Sbjct: 359 ARGAQMMIDVWGADHGGYVKRMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAG 418

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            F+TLR ++DEVG D+VRF ML RK+   ++FD   V  Q ++NPVFYVQYA+ARCRS+ 
Sbjct: 419 TFVTLRDLIDEVGRDAVRFTMLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVL 478

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R A +     D D         ES    +E+ LI  LAE+PR++E A +A+EP+++AFYL
Sbjct: 479 RAAAEAAVYGDTDDAALASASLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYL 538

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  FH  W+ GR++  LRF+Q +  + T  RL LV A A +I SGL I+GVE   EM
Sbjct: 539 ADVAGDFHALWNRGRDDASLRFLQPDAVEATRARLALVAATAVVIRSGLAIMGVEPVEEM 598


>gi|311070252|ref|YP_003975175.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870769|gb|ADP34244.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 556

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 208/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +K    K  + E+  +  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQMKDVLKEEIKAAVLKAGLAEENQIPNVILETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y+   YL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEDIVASFDKGKASIEKLDIAGPGFINFYMDNQYLTKLIPSVLEAGEAYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G ++ +EFVSANPTG +H+GH R A VGD+L +++A +GY+V+REYYINDAG QIN LA
Sbjct: 121 NGERIQVEFVSANPTGDLHLGHARGAAVGDSLCNVLAKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   + ++PE  Y G  +  +GK LA++Y    +   E +     ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIIAIGKRLAEEYGDRFVKEEESERQKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  +++ SE   +  +   I   ++ L +QG+VYE          
Sbjct: 240 KYELEKLRVDLENFRVPFNVWYSETSLY--ENGKIDKALEALRKQGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYQKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S +NPV+Y QYA+AR  S+ RQ ++        
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNDNPVYYAQYAHARICSMLRQGEEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P   +   +     E  L+  +  +P  +  A   + P+++  Y+YDLA+  H  ++ 
Sbjct: 456 LTPAADLDFSAVNSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLAASLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N + +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|308175459|ref|YP_003922164.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307608323|emb|CBI44694.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328555439|gb|AEB25931.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328913809|gb|AEB65405.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 556

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 322/587 (54%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +K    K  + E+  +  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQMKDVLKEEIKAAVLKAGLAEESQIPSVLLETPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++  YL K++ S++ +G  YG   +G
Sbjct: 61  APRQIAEEIVAAFDKGKASIEKMDIAGPGFINFYMNNGYLTKLIPSVLEAGEHYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDVLCSVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK+LA+ +    ++  E +     ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R DL+   +  D++ SE   +  +   I   ++ L  +G+VYE          
Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DGSYTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  KK  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++        
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P   +         E  L+  +  +P  +  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRITNYIYDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N++ +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|149186244|ref|ZP_01864558.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830275|gb|EDL48712.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 579

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 259/587 (44%), Positives = 363/587 (61%), Gaps = 18/587 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L A F++++      ++ +  +  +     + +E PRD +HG L+TNAAM+L++    +P
Sbjct: 7   LHAGFAAKIDAVFNALEMEGSLPPETDRSNVTVEPPRDPSHGDLATNAAMVLAKKAKTNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE IV  +  +PD+    IAG GFINL LS     + L +I   G +YGR+ IG G 
Sbjct: 67  RALAEKIVEHLTREPDITEASIAGPGFINLCLSEQAWLRELEAIAALGADYGRSQIGGGK 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VNIE+VSANPTGPMH+GHCR AVVGD LA L+ FSG+ V REYY+NDAG Q++ LA S 
Sbjct: 127 TVNIEYVSANPTGPMHMGHCRGAVVGDALAGLLEFSGHTVIREYYVNDAGGQVDVLARSA 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +   +PEG YPG YLK VG+ LA ++ +   + PE  WLP+ ++ +V AM
Sbjct: 187 HLRYREALGEDIGAIPEGLYPGDYLKPVGERLAQEFGAAYKDAPESDWLPLFRERAVAAM 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR+DL  L I HD+F SE            +    L   G+VY+G+L  PK K   +
Sbjct: 247 MDMIREDLALLGIHHDLFSSEAKLQA--AGKPEEAEAWLREHGFVYDGVLEAPKGKAPPE 304

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                +  LFRST  GDD DRP+ KS+G++TYF ADLAY   K E   D +I + G+DH+
Sbjct: 305 DWEPVELPLFRSTEFGDDQDRPIKKSNGAWTYFGADLAYHFQKAE-NADALIDIWGADHA 363

Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           G VKR++A  AA+++   +    +V L ++V L R+G P+KMSKRAG F+TL  VV+EVG
Sbjct: 364 GTVKRIKAAVAALTKGAGRDVPFDVKLVQMVNLVRNGEPVKMSKRAGTFVTLADVVNEVG 423

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    ++FDF KV E SK+NPVFY+QYA+AR RS  R+A     D   D
Sbjct: 424 KDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVFYLQYAHARIRSTLRKAGVEPSDAHLD 483

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +           EL L+   A++PRV+E A  A+EP+++AF+L DLA+ FH  W+ 
Sbjct: 484 RLGAD-----------ELALVREAAQFPRVVEAAAKAREPHRIAFFLGDLAAAFHSFWNA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++P  R +Q ++ +LT  RL +   V  +I +GL I+GVE+  EM
Sbjct: 533 GNDDPAKRIIQEDDAELTAARLFVAAQVGQVIRNGLGILGVEAVEEM 579


>gi|254436491|ref|ZP_05049985.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251937|gb|EDY76251.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 578

 Score =  598 bits (1542), Expect = e-168,   Method: Composition-based stats.
 Identities = 264/586 (45%), Positives = 371/586 (63%), Gaps = 10/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  + + + L  +     +   +    + +E PRD  HG ++TNAAM+L++P GL
Sbjct: 1   MNLFADIRAAVIDCLNVLTNDGVLPAGLDFANVTVEPPRDATHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A++  D  + S  IAG GF+NL L       ++ +++  G ++G++ +G 
Sbjct: 61  KPRDIAEALAAKLLADRRIMSADIAGPGFLNLALDAGVWAGVVRAVLTDG-DFGKSNLGT 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q++ LA 
Sbjct: 120 GLKINVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQVDVLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV+ RY +A +       +G YPG YL   G++L  K     +   E+ WL  V+D+  Q
Sbjct: 180 SVYLRYLEA-HGQAVTFEDGTYPGEYLIKAGQDLKTKVGDAYVGQGEDVWLDDVRDFGTQ 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L ++ D+F SE   +      I   I +L  +G +Y+G L PPK K  
Sbjct: 239 AMMALIREDLDMLGVKMDVFYSEKSLY--GTGRIEAAIADLKSKGLIYKGTLEPPKGKLP 296

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LF+ST  GDDVDRP+ KSDG++TYFA D+AY   K  RGFD +I V G+D
Sbjct: 297 EDWE-PREQTLFKSTDFGDDVDRPIQKSDGAWTYFAPDIAYHFDKVSRGFDALIDVFGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR++A  AA+S+    +++ L +LV+LY++G P KMSKRAG FI LR +VDEVG 
Sbjct: 356 HGGYVKRMKAAVAALSDNAVPLDIKLTQLVKLYKNGEPFKMSKRAGTFIMLRDLVDEVGP 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF KV EQSK+NPVFYVQYA AR  S+ R+A +   D+    
Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVLRKAAEAGVDVG--- 472

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +         +EL +   LAE+PR++E A    EP+++AFYLYDLAS  HG W+ G
Sbjct: 473 -DLAIADLSLATHPAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASELHGLWNRG 531

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  LRF+Q +N   T  ++ L+ AV+ +I+ GL+I+GV    EM
Sbjct: 532 NDDASLRFLQVDNIPATQAKIALIKAVSVVISHGLSILGVTPAEEM 577


>gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 556

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 207/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      R+K  +K  +      +++ +  +++E PR+ AHG  STN AM L+R    
Sbjct: 1   MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPDVILEVPREKAHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV         V  + IAG GFIN Y+   YL +++  I+ +G  YG   +G
Sbjct: 61  PPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  LA
Sbjct: 121 KGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   D ++PE  Y G  +  +GK+LA+++  + ++  E++ L   ++Y +
Sbjct: 181 KSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I+ DL    +  D++ SE   ++     I + +  L  +G++YE          
Sbjct: 240 RYELEKIKKDLADFRVTFDVWYSETSLYK--SGKIDEALAVLRERGHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G+
Sbjct: 288 ------KDGATWFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A  AA+      + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIAALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   LDFD      QS ENPV+YVQYA+AR  SI RQ +++    + D
Sbjct: 402 LDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L        +      E++L+  L E+P  +  A + + P+++  Y+++LAS  H  ++ 
Sbjct: 462 L------QLDYIQTEKEIELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N + +  RL L+ AV   + + L +IGV +P +M
Sbjct: 516 E------KVLDPENAEKSRARLALMKAVQITLQNALALIGVSAPEKM 556


>gi|154687847|ref|YP_001423008.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166232756|sp|A7Z9V1|SYR_BACA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|154353698|gb|ABS75777.1| ArgS [Bacillus amyloliquefaciens FZB42]
          Length = 556

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +K    K  + ++  +  +++E P++  HG  STN AM L+R    
Sbjct: 1   MNIAEQMKDVLKEEIKAAVLKAGLADESQIPSVLLETPKEKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IVA   K    ++ + IAG GFIN Y++ SYL K++ S++ +G  YG   IG
Sbjct: 61  APRQIAEEIVASFDKGKASIEKMDIAGPGFINFYMNNSYLTKLIPSVLEAGEHYGETNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA
Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDALCSVLSKAGYDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   +  +PE  Y G  +  +GK+LA+ +    ++  E +     ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R DL+   +  D++ SE   +  +   I   ++ L  +G+VYE          
Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DGSYTY   D+AY K K +RGFD +I V G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  KK  + V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD       S ENPV+Y QYA+AR  S+ RQ ++        
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P   +         E  L+  +  +P  +  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N++ +  RL L+ A    +N+ L +IGV +P +M
Sbjct: 516 E------KVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556


>gi|197118664|ref|YP_002139091.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690877|sp|B5EEF0|SYR_GEOBB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197088024|gb|ACH39295.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 554

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 206/584 (35%), Positives = 324/584 (55%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + +   ++       +    +  I +E+P    HG  +TN AM +++     P 
Sbjct: 1   MKEQLRACILKGIEGCFADGTLTSGEVPAINVEKPAHAEHGDFATNVAMQMAKQQRKAPR 60

Query: 63  TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +AE++VA++      ++S+ IAG GFIN ++  S  R+ L+ I  +G  +G++ IG+G 
Sbjct: 61  AVAEILVAKLAGASDLIESLEIAGPGFINFFIKDSAWRRTLTEIDRAGDAWGKSGIGRGK 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+GH R A  GD +ASL++ +G++V REYYINDAG Q+NTL LS 
Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVASLLSAAGFDVQREYYINDAGNQMNTLGLSG 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++ L     D PE  Y G Y+K + ++   KY    L   +E  +          +
Sbjct: 181 LLRYKELL-GEKIDFPETCYQGDYMKDIARDAVTKYGDRFLKVSQEDGVAFFSKMGGDLI 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I  DL+   I+ D + SE      D   ++  I+ +  +G +YE             
Sbjct: 240 LAGIDQDLQDFGIRFDHWFSEQSLF--DEGKVKSAIEEMQAKGLIYE------------- 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L FR+T  GDD DR +++S+G  TYFA+D+AY + K+ RGFD +I V G+DH 
Sbjct: 285 ---QEGALWFRTTDYGDDKDRVVVRSNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHH 341

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV RL++V   +    + + ++L +LV L RDG+P+ MS R+G+F+TL+ VVDEVG D+
Sbjct: 342 GYVPRLKSVVQGLGRDASDLGIILVQLVSLLRDGVPVAMSTRSGEFVTLKEVVDEVGRDA 401

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF  L R++   LDFD    K QS +NPV+YVQYA+AR +SIF  A++   +  FD   
Sbjct: 402 ARFFFLMRRSDSQLDFDLELAKRQSNDNPVYYVQYAHARIKSIFDTARERGVEPRFDSVK 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ++         +L L+  L+ YP ++E   +  EP+++ +YL +LA  FH  ++  R 
Sbjct: 462 LELLQT-----PEDLSLVKKLSVYPEILEGGAVNFEPHRITYYLQELAGEFHSFYNKSR- 515

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +     +LT  RL L+H VA  + + L ++G+ +P  M
Sbjct: 516 -----VITPEEPELTQARLFLLHCVAITLKNALTVLGISAPERM 554


>gi|253577362|ref|ZP_04854679.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843262|gb|EES71293.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 559

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 210/586 (35%), Positives = 314/586 (53%), Gaps = 32/586 (5%)

Query: 2   YLFADFSSRLKNY-LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
                 +  LK   L  I      +++ +  IV+E P+D AHG  +TNAAM LSR    +
Sbjct: 4   NPLEQMNQALKEAILDAIVSAGLAQREEIPAIVLEVPKDKAHGDFATNAAMQLSRIAKKN 63

Query: 61  PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE I+ ++      ++   +AG GFIN  LS SYL  IL  +   G  YGR  +G 
Sbjct: 64  PRQIAEEILGQLDYGKAGIEKAEVAGPGFINFTLSKSYLYPILLQVYREGENYGRTTLGN 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV +EFVSANPTG +H+GH R A VGD L +++ F GY+VTREYYINDAG QI  L  
Sbjct: 124 GKKVQVEFVSANPTGSLHLGHARGAAVGDALCNVLDFVGYDVTREYYINDAGNQIVNLIK 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY+Q L   D ++PE  Y G  +K   KEL  +   +LL  PEE+    ++ + ++
Sbjct: 184 SIEARYRQEL-GQDVEMPEDGYHGEDIKGFAKELVAEQGDKLLGMPEEERTAFLRKFGLE 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  I+ DL+   ++ D++ SE   ++     +   +  L  +G  YE           
Sbjct: 243 KELSKIQRDLERFRVRFDVWFSETSLYQ--DGQVEASLSELREKGQTYE----------- 289

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       ++T  GDD DR L+K+DG+YTY   D+AY + KY+RGFD +I + G+D
Sbjct: 290 -----QDGATWLKTTAYGDDKDRVLVKNDGTYTYLTPDIAYHRNKYDRGFDRIINIWGAD 344

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R++A   A+ +   ++ VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG 
Sbjct: 345 HHGYIPRVKAAMQAIGKDPEKLTVLIAQMVSLFQDGEKVKMSKRTGKAVTMVDLMDEVGV 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D +R+    R     LDFD       S ENPV+YVQYA+AR  SIFRQA++    +    
Sbjct: 405 DPIRYFFTMRSMDSHLDFDMDLAISTSNENPVYYVQYAHARICSIFRQAEEQGIQIP--- 461

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +         E  L+  L E P  I  A     P++L  Y+Y+LA++FH ++   
Sbjct: 462 -AAENVNLSKLTAEHEYDLLRKLGELPEEINVAAENYAPHRLVRYVYELAALFHSYYRAE 520

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V   + +    RL L+  V +++ + L +IGV +P +M
Sbjct: 521 R-------VITEDAEQAAARLVLLGGVRTVLANVLRLIGVSAPEKM 559


>gi|295697794|ref|YP_003591032.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295413396|gb|ADG07888.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 557

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 219/587 (37%), Positives = 322/587 (54%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    +   RL+  L     +  +  +  DR+ +E PRD  HG  S+NAAM L++ +   
Sbjct: 1   MSTLLNVQERLRRELAAAAGRCGLSVE-ADRVHLEVPRDKRHGDYSSNAAMQLAKEVRRP 59

Query: 61  PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  +A+ +   +      V+ V +AG GF+N YL   YL  IL  ++     YGR  + +
Sbjct: 60  PRALAQQLAETLDCRAAGVERVEVAGPGFLNFYLDTGYLDDILREVLKEKGAYGRRAVPR 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G++V +EFVSANPTG +H+GH R A  GD L  ++ + GYEV REYYINDAG Q++ LA+
Sbjct: 120 GSRVQVEFVSANPTGRLHIGHARGAAYGDALCRILEWDGYEVQREYYINDAGNQVHNLAI 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY QAL   D  +P+  Y G  +  + + L  +         EEK    +K   ++
Sbjct: 180 SLEARYFQAL-GRDVPMPDDGYYGRDVVELAERLVREEGDRYAQMSEEKRYEALKQKGLE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM++ IRDDL    ++ D + SE   +  +   + + ++ L R+G+VYE           
Sbjct: 239 AMLQQIRDDLTRFRVRFDRWFSERALY--ESGAVEETVEELRRRGWVYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L FRST  GDD DR L+KSDGSYTY   D+AY + K ERGFD +I V G D
Sbjct: 287 ------DGALWFRSTAFGDDKDRVLIKSDGSYTYLTPDIAYHRDKLERGFDRLIDVWGQD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++A  AA+     ++ V LC+LV LYR+G P++MSKR G+ +T+  ++DEVG 
Sbjct: 341 HHGYVGRMKAAVAALGGDPERLVVRLCQLVALYRNGEPVRMSKRTGNAVTMAELMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFD 478
           D+ R+ +L R N   +DFD      QS +NPV+YVQYA+AR  SI RQA +   PD+D  
Sbjct: 401 DAARYFLLRRSNDSHIDFDLDLAVSQSNDNPVYYVQYAHARICSILRQASERGYPDVDQA 460

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               N+     E    E+ L+  L  +P  +E+A  A  P+ +  YL +LA  FH  ++ 
Sbjct: 461 AESANLRVLRREP---EVDLLKWLGNFPTEVESAAAAYAPHHIVHYLEELAKRFHSFYTS 517

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V     ++ + RL LV  V   +  GL+++GV +P +M
Sbjct: 518 CR-------VLGEAPEIEVARLALVRGVQWTLRVGLDLLGVAAPEQM 557


>gi|253700562|ref|YP_003021751.1| arginyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511647|sp|C6E805|SYR_GEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|251775412|gb|ACT17993.1| arginyl-tRNA synthetase [Geobacter sp. M21]
          Length = 554

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 205/584 (35%), Positives = 323/584 (55%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + +   ++       +    +  I +E+P    HG  +TN AM +++     P 
Sbjct: 1   MKEQLRACILKGIEGCFADGTLTSGEVPAINVEKPAHAEHGDFATNVAMQMAKQQRKAPR 60

Query: 63  TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +AE++VA++      ++S+ IAG GFIN ++     R+ LS I  +G  +G++ IG+G 
Sbjct: 61  AVAEILVAKLAGASDLIESLEIAGPGFINFFIKDGAWRRTLSEIDRAGDAWGKSGIGRGK 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+GH R A  GD +ASL++ +G++V REYYINDAG Q+NTL LS 
Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVASLLSAAGFDVQREYYINDAGNQMNTLGLSG 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++ L     + PE  Y G Y+K + ++   KY    L   +E+ +          +
Sbjct: 181 LLRYKELL-GEKIEFPETCYQGDYMKDIARDAVTKYGDRFLKVSQEEGVAFFSKMGGDLI 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I  DL+   ++ D + SE      D   +   I+ +  +G +YE             
Sbjct: 240 LAGIDQDLQDFGVRFDHWFSEQSLF--DEGKVNSAIEEMQAKGLIYE------------- 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L FR+T  GDD DR +++S+G  TYFA+D+AY + K+ RGFD +I V G+DH 
Sbjct: 285 ---QEGALWFRTTDYGDDKDRVVVRSNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHH 341

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV RL++V   +    + + ++L +LV L RDG+P+ MS R+G+F+TL+ VVDEVG D+
Sbjct: 342 GYVPRLKSVVQGLGRDASDLGIILVQLVSLLRDGVPVAMSTRSGEFVTLKEVVDEVGRDA 401

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF  L R++   LDFD    K QS +NPV+YVQYA+AR +SIF  A++   +  FD   
Sbjct: 402 ARFFFLMRRSDSQLDFDLELAKRQSNDNPVYYVQYAHARIKSIFDTARERGVEPLFDSVK 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ++         +L LI  L+ YP ++E   +  EP+++ +YL +LA  FH  ++  R 
Sbjct: 462 FELLQT-----PEDLSLIKKLSVYPEILEGGAVNFEPHRITYYLQELAGEFHSFYNKSR- 515

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +     +LT  RL L+H VA  + + L ++G+ +P  M
Sbjct: 516 -----VITPEEPELTQARLFLLHCVAITLKNALTVLGISAPERM 554


>gi|157694133|ref|YP_001488595.1| arginyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166980180|sp|A8FIG8|SYR_BACP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157682891|gb|ABV64035.1| arginine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 557

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 203/587 (34%), Positives = 324/587 (55%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +     K  + ++  +  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQVKDALKEEIIAAVVKAGLADESQVPDVLLEVPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV    K    ++ + IAG GFIN Y++  YL K++ +++ +   YG    G
Sbjct: 61  APRQIAEDIVKAFDKGKASIEKMDIAGPGFINFYMNNQYLTKLIPAVLEAKEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +G++V+REYYINDAG QIN LA
Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   + ++PE  Y G  +K +G++LAD++    ++  EE+ +   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHESEEERMKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   +  +   I   ++ L  +GYV+E          
Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLREKGYVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +      RST  GDD DR L+K DGS+TY   D+AY K K +RGFD +I + G+
Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     ++ V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R  +  +DFD       S ENPV+Y QYA+AR  S+ RQ ++   + + +
Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               + I  E E+D     L+  +  +P V+  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 462 KADFSHIQSEKEYD-----LLKIIGGFPEVVAEAAEKRIPHRVTNYIYDLASALHSFYNA 516

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N   T  RL L+ A    + + L +IGV +P +M
Sbjct: 517 E------KVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557


>gi|258543179|ref|YP_003188612.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634257|dbj|BAI00233.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637317|dbj|BAI03286.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640369|dbj|BAI06331.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643426|dbj|BAI09381.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646481|dbj|BAI12429.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649534|dbj|BAI15475.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652520|dbj|BAI18454.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655578|dbj|BAI21505.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 599

 Score =  594 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 270/599 (45%), Positives = 375/599 (62%), Gaps = 21/599 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  +   +   ++E+     V ++ L R+ +   RD AHG ++TNAA++L++     P 
Sbjct: 5   VFQRYRQHVLAIVQELLP--NVPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V  ++    V SV  AG GF+N+ L P  +R IL +++ +G  YG +  GKG +
Sbjct: 63  DIAADLVTALQKVEGVASVAAAGPGFVNITLKPDVMRGILPAVLNAGEAYGASQAGKGLR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+LMA +G+ VT+E+YINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLMAKAGFAVTKEFYINDAGAQVRALAWAAY 182

Query: 183 WRYQQAL-----YNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLN---------FPE 226
           WRY QAL      ++ S L  G   Y G YL  VG ELA +Y ++L            PE
Sbjct: 183 WRYLQALGTKMTQDDFSALAPGGLQYQGEYLIPVGMELAAEYGNKLTETDADGSPLPAPE 242

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             WL  V+ ++V  M+  I++DL AL + HD+F SE +  R         I  L +QG +
Sbjct: 243 VTWLETVRGFAVTHMLTAIKEDLAALGVHHDVFTSEAEVLR--RGVTDAAISKLEQQGLL 300

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           YEG+L PPK K  +  + +R+QLLFRST  GDDVDRPL KSDG+ TYFA D+ Y   K  
Sbjct: 301 YEGVLEPPKGKLPEDWE-EREQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKVA 359

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG   MI V G+DH GYVKR++A   A++     + V+LC++V + RDG P+KMSKRAG 
Sbjct: 360 RGAQMMIDVWGADHGGYVKRMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAGT 419

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           F+TLR ++DEVG D+VRF ML RK+   ++FD   V  Q ++NPVFYVQYA+ARCRS+ R
Sbjct: 420 FVTLRDLIDEVGRDAVRFTMLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVLR 479

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            A +     + D         ES    +E+ LI  LAE+PR++E A +A+EP+++AFYL 
Sbjct: 480 AAAEAAAYGETDDAALASASLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYLA 539

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           D+A  FH  W+ GR++  LRF+Q +  + T  RL LV A A +I SGL ++GVE   EM
Sbjct: 540 DVAGDFHALWNRGRDDASLRFLQPDAVEATRARLALVAATAVVIRSGLAVMGVEPVEEM 598


>gi|194016224|ref|ZP_03054838.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011697|gb|EDW21265.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 557

 Score =  594 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       LK  +     K  + ++  +  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNIAEQVKDALKEEIIAAVVKAGLADESQVPDVLLEVPKDKTHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV    K    ++ + IAG GFIN+Y++  YL K++ +++ +   YG    G
Sbjct: 61  APRQIAEDIVKAFDKGKASIEKLDIAGPGFINIYMNNQYLTKLIPAVLEAKEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +G+EV+REYYINDAG QIN LA
Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFEVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY +AL   + ++PE  Y G  +K +G++LAD++    ++ PEE+ +   ++Y +
Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHEPEEERMKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ +R DL+   +  D++ SE   +  +   I   ++ L  +GYV+E          
Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLRAKGYVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +      RST  GDD DR L+K DGS+TY   D+AY K K +RGFD +I + G+
Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     ++ V + +LV LY++G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R  +  +DFD       S ENPV+Y QYA+AR  S+ RQ ++   + + +
Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               + I  E E+D     L+  +  +P V+  A   + P+++  Y+YDLAS  H  ++ 
Sbjct: 462 KADFSHIQSEKEYD-----LLKIIGSFPEVVAEAAEKRIPHRVTNYIYDLASALHSFYNA 516

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N   T  RL L+ A    + + L +IGV +P +M
Sbjct: 517 E------KVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557


>gi|332187136|ref|ZP_08388876.1| arginyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012836|gb|EGI54901.1| arginyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 574

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 257/587 (43%), Positives = 375/587 (63%), Gaps = 16/587 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F++ +   L  +     +   +  R + +E PRD +HG L+TNAAM+L++P G 
Sbjct: 1   MTLYTRFAAHIDAALDTLVAAGTLPGGLDRRNVTVELPRDASHGDLATNAAMVLAKPAGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE I   +    +V+SV +AG GF+N+ L+ +  R  L++I  +G +YGR+  G+
Sbjct: 61  NPRALAEAIAVELGKLDEVESVSVAGPGFLNMRLTKAAWRDELAAIPQAGGDYGRSARGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VNIE+VSANPTGPMH+GHCR AVVGD LA+L+ F+G++V REYY+NDAG Q++ LA 
Sbjct: 121 GVTVNIEYVSANPTGPMHMGHCRGAVVGDALATLLEFAGHKVIREYYVNDAGGQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S   RY++AL     ++PEG YPG YLK VG+ LA ++ +  ++ PE +WL + +  +V 
Sbjct: 181 SAHLRYREAL-GETIEIPEGLYPGEYLKPVGEALAAEFGNAYVDAPESEWLVLFRTRAVA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  L I HD+F SE +               L  +G VY+G+L  PK +T 
Sbjct: 240 AMMAMIREDLALLGIHHDLFSSEAELQA--AGKPEAAEAELRSRGLVYDGVLEAPKGETP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +     L FRS+  GDD DRP+ KS+G++TYF ADLAY   K +   D +I + G+D
Sbjct: 298 EDWEPVELPL-FRSSQFGDDQDRPIKKSNGAWTYFGADLAYHYQKAQT-ADQLIDIWGAD 355

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+G VKR+ A   A++  K + +V L ++VRL R G P+KMSKRAG+F+TL  VV EVG 
Sbjct: 356 HAGTVKRIVAAVEALTGGKTKFDVKLVQMVRLLRGGEPVKMSKRAGNFVTLADVVREVGK 415

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFD 478
           D VRF ML R++   +DFDF KV E SK+NPVFYVQYA+AR  S+ R+A +   +  D D
Sbjct: 416 DVVRFTMLTRRSDAQMDFDFAKVVEASKDNPVFYVQYAHARIASLKRRAAEAGIEGGDAD 475

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L         S  D  ++ L+   A++PR++E A +A+EP+++AFYLYDLA+ FH  W+ 
Sbjct: 476 L---------SLLDAEDIALVKLAAQFPRIVETAAVAREPHRIAFYLYDLAAAFHAAWNV 526

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + P  RF+ A +  +T  RL L   +  +I +GL ++GVE+ +EM
Sbjct: 527 GNDRPDRRFLIAEDAAVTRARLFLSEGIGQVIRNGLALMGVEAVSEM 573


>gi|95930475|ref|ZP_01313211.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133515|gb|EAT15178.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 554

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 221/584 (37%), Positives = 327/584 (55%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       +   L++      +    +    IE P    HG  + NAAM+++R     P 
Sbjct: 1   MKTRLKEAVALALRQCFDAETLISNEIPDFAIEVPNRSDHGDFAVNAAMLMARTEKKAPR 60

Query: 63  TIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE++VA++K      D V IAG GFIN +LS S   + L  I   G  +G+  +G G 
Sbjct: 61  QIAEILVAQLKEQQGLWDRVEIAGPGFINFFLSASCWHEALKQIYAQGAGFGKCDVGAGK 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +V +EFVSANPTGP+H+GH R A  GD +AS++  +G+EV REYYINDAG Q++TL  S+
Sbjct: 121 RVQVEFVSANPTGPLHIGHGRGAATGDAVASVLQEAGFEVQREYYINDAGNQMDTLGRSI 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + RY Q L   + D PE  Y G Y++   +++ D      L+  E   +        +A+
Sbjct: 181 YLRYCQ-LQGQEVDFPEDCYQGDYIRDYAQQVLDGEGRRFLDMEEADAIAWFSREGGEAI 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + I  DL+   I+ D + SE   +  D   ++  ID L R GY YE             
Sbjct: 240 RQGIDADLQQFGIRFDNWYSEQTLY--DRDLVKQGIDALTRDGYTYE------------- 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  + FR+T  GDD DR L++S+G+ TYFA+D+AY + KY+RGFD +I V G+DH 
Sbjct: 285 ---QDGAIWFRTTDFGDDKDRVLIRSNGATTYFASDVAYHREKYQRGFDIVIDVWGADHH 341

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV R++AV AA+      + ++L +LV L R+G  I MS RAG F+TL+ VVDEVG D+
Sbjct: 342 GYVPRMKAVLAALGRNPEDLQIILVQLVNLLREGEQIAMSTRAGKFVTLKEVVDEVGRDA 401

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF  L R++   LDFD    K+QS ENPV+YVQYA+AR  SI R A++        L  
Sbjct: 402 CRFFFLMRRSDSQLDFDLELAKKQSTENPVYYVQYAHARVCSINRNAEESG----VALLG 457

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + +  E+     ELQL   ++ YP V+ +A +  EP+K+ FYL +LA+ FH +++  R 
Sbjct: 458 GDEVKLEALTLPEELQLTKMMSRYPEVVASAALNYEPHKITFYLQELAAQFHSYYNQHR- 516

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V  ++  ++  RL LV+AV  +++S L ++GV +P +M
Sbjct: 517 ------VIVDDVDVSQARLYLVNAVKQVVSSALTVLGVSAPEKM 554


>gi|5834360|gb|AAD53926.1|AF179611_10 arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 580

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 264/580 (45%), Positives = 363/580 (62%), Gaps = 12/580 (2%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           F   L + L   + +  +   +   R+ +E PRD +HG L+ NAAM+L++     P  +A
Sbjct: 12  FCRALSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKTAPRALA 71

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +V  +     V+SV IAG GFIN+ L+    RK L+ I+  G +YGR+ IG+  +VN+
Sbjct: 72  EKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQNLRVNV 131

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA S + RY
Sbjct: 132 EYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLARSAYMRY 191

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++AL   +  +PEG YPG YL  VGK LA+KY    LN PE +WL + ++ +V AMM +I
Sbjct: 192 REAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVAAMMDMI 250

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           RDDL  L I HD F SE   H+     ++  ID L ++G +Y+G+L  PK +T +     
Sbjct: 251 RDDLALLGIHHDKFTSEAALHK--AGIVQKAIDKLEKEGLIYKGVLEAPKGETPEDLVTC 308

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R  L+ R+T   DD DRP+  SDGSYTYF ADLAY   K     D ++ + G+DH+G VK
Sbjct: 309 RTDLVSRATKFSDDSDRPVQISDGSYTYFGADLAYHARKAAT-ADQLVDIWGADHAGTVK 367

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A  AA+++ K  ++V L ++V L R G P+KMSKR  +F+TL  VV EVG D VRF 
Sbjct: 368 RIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRFRNFVTLADVVSEVGRDVVRFS 427

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML RK    +DFDF KV E SK+NPVFYVQYA+AR  S+ R+       L  +       
Sbjct: 428 MLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR-------LVSENITLPEK 480

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              +  D  EL LI   A++PR+IE A +A EP+++ FYL+ LA+ FH  W+ G +NP  
Sbjct: 481 ADLNLLDKEELALIQQAAQFPRLIEAAAVAHEPHRIVFYLFTLAADFHSLWNKGNDNPDR 540

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RF+  +N   T  RL L  AV  +I +GL ++GV +  EM
Sbjct: 541 RFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 580


>gi|317130799|ref|YP_004097081.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315475747|gb|ADU32350.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 555

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 328/587 (55%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         LK+ +     K ++   + +  +VIE P++  HG  +TN AM L+R    
Sbjct: 1   MSQVEQLKETLKSEIIAAVIKAQLATTENIPGVVIESPKEKEHGDYATNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IA+ IVA   K    V+ + IAG GFIN ++   YL +I+S+++  G  +G+  +G
Sbjct: 61  APRMIADDIVANFNKEAASVEKIEIAGPGFINFFMKKDYLSEIVSTVLKQGNAFGKVNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G ++ +EFVSANPTG +H+GH R A VGD+L +++  +GY+V REYYINDAG QI  LA
Sbjct: 121 EGKRLQVEFVSANPTGTLHLGHARGAAVGDSLCNILEKAGYDVAREYYINDAGNQIENLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY QAL   D  +PE  Y G  +    KE+AD Y    ++  E++ L   ++Y +
Sbjct: 181 RSIDARYLQAL-GKDVPMPEDGYHGQDIIGFAKEIADTYGDRFIDAEEKERLAFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +++DL    +  D + SE   +  +   + D++  L  +G  YE          
Sbjct: 240 KRELDKLKEDLADFRVNFDHWYSETSLYTTE--KVTDVLTELKNRGETYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +   + FRST  GDD DR L+KSDGSYTY   D++Y K K+ RGF+ +I + G+
Sbjct: 288 ------EDGAVWFRSTTYGDDKDRVLVKSDGSYTYLTPDISYHKDKFARGFEELINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K Q++V + ++V L+ +G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKEQLSVQIIQMVNLFENGEKVKMSKRTGKAVTMRDLMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD    K QS ENPV+YVQYA+AR  S+ RQA+D+  ++D  
Sbjct: 402 IDATRYFFAMRAADTHLDFDMSLAKSQSTENPVYYVQYAHARICSMLRQARDLGYEVD-- 459

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                    E      EL L+  L EYP  + +A   + P+++A Y+YDLA   H  ++ 
Sbjct: 460 ----PHAQFERLTAEKELDLMKKLGEYPEAVADAAKKRAPHRMANYVYDLAQTLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       V   + +LT  RL L+ AV + +   L ++GVE+P +M
Sbjct: 516 EK-------VINEDSELTKARLGLMEAVRATLQDALKLVGVEAPEKM 555


>gi|309390229|gb|ADO78109.1| arginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 553

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/581 (38%), Positives = 332/581 (57%), Gaps = 38/581 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+  S L   +K+      ++ + +  + IE PR+  HG  +TN AM+L+   G++P  I
Sbjct: 11  AELVSFLVESVKKAIFAGDLDLEKVPEVSIEVPREKEHGDYATNLAMVLAGKAGMNPRKI 70

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE+IVA  +    V+S  IAG GFIN  L+ ++L   L  I   G +YG+   GKG  V 
Sbjct: 71  AEIIVANFE-SEIVESTNIAGPGFINFKLNNAWLWNNLKLITERGADYGKIDAGKGKSVQ 129

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R AVVGD  AS+M  +GY+V REYYINDAG Q++ LA S   R
Sbjct: 130 VEFVSANPTGPLHVGHSRGAVVGDVTASIMETAGYDVEREYYINDAGNQMDILAESTLLR 189

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y++ L   + ++PE  Y G Y+K + +EL  +Y ++L+   E K L I ++Y+ Q M+K 
Sbjct: 190 YREIL-GEEIEMPEDVYAGDYIKEIAQELYAEYGADLIEKEESKKLEICREYAYQKMLKN 248

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I  DL    I+ D + SE   H   P  I   I+ L  +GY++E                
Sbjct: 249 IEADLGEFGIEFDNWFSERSLH---PDKIEAAIEILKEKGYIFE---------------- 289

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   L F++T  GDD DR ++KSDGS TY AAD+AY   K ERGFD +I V G+DH GY+
Sbjct: 290 EEDALWFKATDFGDDKDRVIIKSDGSPTYLAADMAYHLDKLERGFDKLINVWGADHHGYI 349

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R+ AV  A   K  ++ V++ ++V L R+G  + MSKRAG F+T+  V  EVG D+ R+
Sbjct: 350 PRVRAVIEAFGHKPDKLEVIVVQMVTLLRNGKKMPMSKRAGSFVTMNEVNKEVGIDAARY 409

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + R     LDFD    KE+S  NPV+YVQYA+AR  SI   ++      + DL     
Sbjct: 410 YYVMRSTDSHLDFDLELAKEESTNNPVYYVQYAHARIHSIIDNSELEAKAENLDLLT--- 466

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                    SE+ L+  LA++P  I+ +  +++P+ L  Y YDLA+ FH  +++ R    
Sbjct: 467 -------HESEIALMKMLAKFPEEIKMSAESRQPHHLTTYAYDLATEFHSFYNNCR---- 515

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V  ++++L   RL LV+A   ++ + L ++G+ +P +M
Sbjct: 516 ---VNTDSKELAEARLYLVNAARQVLKNVLTVLGISAPEQM 553


>gi|327441472|dbj|BAK17837.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 555

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 201/587 (34%), Positives = 331/587 (56%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  LK  ID    VE      I +E P+D A+G  +TN AM L++    
Sbjct: 1   MNAVEQLQQSIKAALKAAIDQAGLVEAGTEINIHLETPKDKANGDFATNIAMQLTKLAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE I+A +  +  D++ + IAG GF+N+ +   +L  ++++    G  YGR+  G
Sbjct: 61  PPRAIAEAILAHLTTEGTDIEKIEIAGPGFMNITVRKDFLASVVTATFEQGENYGRSTAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++ F+G++V+REYYINDAG QIN LA
Sbjct: 121 AGEKVQVEFVSANPTGDLHLGHARGASVGDSLCNVLDFAGFDVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY+QAL   ++++PE  Y G  +  +  +LA++Y + +L+  +E+     +++ +
Sbjct: 181 YSLEARYKQAL-GMEAEMPEDGYHGPDIIGIAGKLAEEYGATILDKSDEERFKFFREHGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +++DLK   ++ D++ SE   +  +   I   +D L   G+V++          
Sbjct: 240 KLELAKLQNDLKNFRVEFDVWYSETSLY--ENGKIDVALDKLKANGHVFD---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGSYTY   D+AY + K  RGFD +I + G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKNDGSYTYLTPDIAYHEDKLRRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   +  + V + ++V+LY++G   KMSKR G+ +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYDRGTLEVDIIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+  +       +DFD      QS ENPV+Y QYA+AR  SI R A +   +   +
Sbjct: 402 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRAANEQGFEASLE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                V          E  ++  +  +P+++ +A   + P+++A Y+ DLA+ FH  ++ 
Sbjct: 462 NLNLLVA-------EKEEDVLKKVGAFPQIVADAAKHRTPHRIANYIQDLAAAFHSFYNA 514

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N++LT  RL L+ AV + + + L +IGV +P +M
Sbjct: 515 E------KVLNQDNKELTEARLALITAVKTTLANALKLIGVSAPEKM 555


>gi|299821825|ref|ZP_07053713.1| arginine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817490|gb|EFI84726.1| arginine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 556

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 204/587 (34%), Positives = 319/587 (54%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEI-DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +L   +K      + + +  +  I++E P++  HG  STN AM L+R    
Sbjct: 1   MNVIQKSQKQLIEQIKAATVAALGLSESEIPDILLEVPKEKQHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE I+  I   D  +  + +AG GFIN ++  +YL +++  I+ +G  YG +  G
Sbjct: 61  APKQIAEAIIKEIDTEDSLIRKIDVAGPGFINFFVDNAYLTELVPVILEAGDSYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K+ +EFVSANPTG +H+GH R A +GD+LA++++ +G++V+REYYINDAG QIN L 
Sbjct: 121 KGQKIQLEFVSANPTGDLHLGHARGAAIGDSLANILSTAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +A    D   PE  Y GV +K +G +L +KY  + +   E++   + +  ++
Sbjct: 181 LSAEARYFEAC-GIDKPFPEDGYHGVDIKELGNKLFEKYGDKYIEAEEQERRDVFRTEAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+A  +  D + SE   +  +   I   ++ L + GYVYE          
Sbjct: 240 AFETAKLRTDLEAFRVGFDNWFSESSLYAEN--KILPTLEVLRKNGYVYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T  GDD DR L+K+DGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFGDDKDRVLIKTDGSYTYFLPDIAYHLNKLERGFDILIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+     A+     Q+ V + +LV LY +G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMRGAIEALGYAPTQLEVEIIQLVHLYENGEQVKMSKRTGKSVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R +   ++FD    K  S ENPV+YVQYA+AR  SI R  ++    +  D
Sbjct: 402 LDAVRYFFAMRSSDTHMNFDLGLAKATSNENPVYYVQYAHARISSILRSGEEQGIVVS-D 460

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 461 GLDVSLLQTETEID-----LLKVLGEFSDVVAEAAAKRAPHRIVRYLNDLASAFHRFYNT 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +   ++  RL L+ A    + +GL ++GV +P +M
Sbjct: 516 N------KVLNPDEADISKARLALIKAAQVTLRNGLKLLGVSAPEKM 556


>gi|251794170|ref|YP_003008901.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247541796|gb|ACS98814.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 559

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 211/586 (36%), Positives = 320/586 (54%), Gaps = 32/586 (5%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            +      ++K  + +      +   + L   V+E P+D AHG L+TNAAM L++    +
Sbjct: 4   NVLEQMYEKVKEAIADAAVAGGLAAREELPAFVLEVPKDKAHGDLATNAAMQLTKLAKKN 63

Query: 61  PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE I+A +  +   + S  IAG GFIN  +  SYL  ++  I  +G +YGR   G 
Sbjct: 64  PRQIAETIIANLNGEKFGIQSAEIAGPGFINFRMDKSYLYSVVGEITAAGDDYGRTKEGS 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTG +H+GH R A VGD L +++ F+GYEVTREYYINDAG Q+N LA 
Sbjct: 124 GQRVEVEFVSANPTGNLHLGHARGAAVGDALCNVLDFAGYEVTREYYINDAGNQVNNLAR 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY+QAL   D+++PE  Y G  +   GK LA++    LL+  +E+     + + ++
Sbjct: 184 SIEARYRQAL-GQDAEMPEDGYHGEDIVGFGKLLAEEKGDSLLSLSDEERFAFFRQFGLE 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  I+ DL    +  DI+ SE   +  +   +   ++ L  +G VYE           
Sbjct: 243 KELDKIKRDLGLFRVNFDIWYSETSLY--ESGQVETALEALKAKGQVYE----------- 289

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +       +   GDD +R L+K+DGSYTY   D+AY + K+ RG+D MI + G+D
Sbjct: 290 -----EEGATWLSTMPYGDDKNRVLVKNDGSYTYLTPDIAYHQDKFSRGYDKMINIWGAD 344

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R++A  AA+     ++ VL+ ++V L++DG  +KMSKR G  +T++ ++DEVG 
Sbjct: 345 HHGYIPRVKAAMAALGNDPDKLVVLIAQMVSLFQDGEKVKMSKRTGKAVTMQDLMDEVGV 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++R+    R     LDFD       S ENPVFYVQYA+AR  SIFRQA++        +
Sbjct: 405 DAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARICSIFRQAEEQ----SVAI 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P   I        +E  L+  L E P+ +  A     P++L  Y+Y+LAS FH ++   
Sbjct: 461 LPIGDIDFGKLSSEAEFDLLRKLGELPQEVSEAAAQYAPHRLIRYVYELASQFHSYYKAE 520

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V   +   T  R+ L+ AV  +I + L ++GV +P  M
Sbjct: 521 R-------VITEDAAQTQARIALLGAVRIVIANTLRLVGVSAPERM 559


>gi|149182460|ref|ZP_01860935.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849853|gb|EDL64028.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 556

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 335/587 (57%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +L+  +K    K  +  +  L  +++E P++ +HG  STN AM L+R    
Sbjct: 1   MNIAEQVQDKLRTEIKSAVLKAGLATEDQLPDVILETPKEKSHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IA+ I A I  +   ++ + IAG GFIN ++   YL +++++I+ +G EYGR+  G
Sbjct: 61  APRMIADDIAANIDKEAASIEKIDIAGPGFINFFMRNEYLTELVANILEAGDEYGRSDAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG ++N+EFVSANPTG +H+GH R A VGD+L +++  +GY+VTREYYINDAG QI+ LA
Sbjct: 121 KGERINVEFVSANPTGDLHLGHARGASVGDSLCNVLDKAGYKVTREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL  +D  +PE  Y G  +  +G++LAD++  + +   EE+     ++Y +
Sbjct: 181 LSVEARYFQAL-GHDKAVPEDGYQGADIIGIGQKLADEFGDKYIEASEEERYKFFREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M+ ++ DL+   +  +++ SE   +  +   I D +  L    ++YE          
Sbjct: 240 KFEMEKLKKDLEDFRVPFNVWYSETSLY--ENGKIDDALKALKDNNHIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST +GDD DR L+K+DG+YTY   D++Y + K+ERG D +I + G+
Sbjct: 288 ------EDGATWFRSTELGDDKDRVLIKNDGTYTYLTPDISYHRDKFERGHDILINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   + ++ V + +LV L+++G  +KMSKR G  +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIEALGYDREKLEVEVIQLVHLFKNGEKMKMSKRTGKAVTMRDLVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+    R     +DFD      QS ENPV+Y QYA+AR  SI RQA +   + +  
Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSQSNENPVYYAQYAHARICSILRQAAEQGINFEEG 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                            ++L+  L ++P V+ +A   + P+++A Y+ +LAS FH  ++ 
Sbjct: 462 ------TDYSLLKAEKTIELLKKLGDFPGVVADAAAKRTPHRVANYINELASTFHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N +LT  RL L+ AV   + + L +IGV +P +M
Sbjct: 516 E------KVLDMENMELTKARLSLIKAVRLTMKNALKLIGVSAPEKM 556


>gi|304407316|ref|ZP_07388969.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343757|gb|EFM09598.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 558

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 206/584 (35%), Positives = 320/584 (54%), Gaps = 34/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L+ +  + L N +          ++ L   V+E PRD +HG L+TNAAM L++    +P 
Sbjct: 8   LYDNVKTALANAV---VAAGLATREELPAFVLEVPRDKSHGDLATNAAMQLTKLAKRNPR 64

Query: 63  TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE I+A +      ++S  IAG GFIN  L+ SYL  +++ ++ +G  YGR   G G 
Sbjct: 65  QIAEAIIANLDTASASIESAEIAGPGFINFRLNKSYLYPVVTEVLAAGENYGRVNAGAGK 124

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +V +EFVSANPTG +H+GH R A VGD L +++ F+G+EVTREYYINDAG Q+  LA S+
Sbjct: 125 RVEVEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGHEVTREYYINDAGKQVENLAFSI 184

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY+QAL   ++ +PE  Y G  +    +ELA +    LL+ P+++     + Y ++  
Sbjct: 185 EARYKQAL-GQEAVMPEDGYHGADIVGFAQELAAQEGDRLLSLPDDERFIFFRQYGLERE 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I+ DL    +  D++ SE   +  +   +   +D L   G+VYE             
Sbjct: 244 LDKIKRDLGRFRVGFDLWYSETSLY--EQGLVEQGLDALRATGHVYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              +       +   GDD +R L+K+DGSYTY   D+AY + KY RG+D +I + G+DH 
Sbjct: 289 ---EEGATWLNTMQFGDDKNRVLVKNDGSYTYLTPDIAYHRVKYGRGYDRLINIWGADHH 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+ R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T+  ++DEVG D+
Sbjct: 346 GYIPRMKAAMEALGNDPGKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDA 405

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +R+    R     LDFD       S ENPVFYVQYA+AR  SIFRQA++        +  
Sbjct: 406 IRYFFTMRSMDSHLDFDMDLAVSTSNENPVFYVQYAHARICSIFRQAEEQG----IAMRS 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + I         E  L+  L E P+ I +A     P++L  Y+Y+LA+ FH ++   R 
Sbjct: 462 LSEIDLSRLVTEQEYDLLRKLGELPQEITDAAEQYAPHRLIRYVYELAAQFHSYYKAER- 520

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V  ++ + T  RL L+ +   +I + L ++GV +P  M
Sbjct: 521 ------VMTDDAEQTQARLALLASTRIVIANVLKLVGVTAPERM 558


>gi|288572901|ref|ZP_06391258.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568642|gb|EFC90199.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 558

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 210/581 (36%), Positives = 321/581 (55%), Gaps = 32/581 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   L ++  + +V   +L  + +ERP+    G  +TN AM   + LG  P  +A 
Sbjct: 8   LRDLIGEALSDMARQKEVSSDLLPEVHLERPKREDQGDWATNVAMQACKLLGEKPRDLAA 67

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           ++V R+K D  + SV +AG GFIN +L+  ++  ++SS++ SG +YGR  +GKG KV +E
Sbjct: 68  MVVDRLKDDEHIRSVEVAGPGFINFFLADRWIGNVISSVLSSGDDYGRCDLGKGRKVQVE 127

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD + +++ FSG++V +EYY+NDAG Q++ L  S   RY 
Sbjct: 128 FVSANPTGPLHVGHGRGAAVGDIVGNILDFSGWKVEKEYYVNDAGLQMSNLGKSTQSRYF 187

Query: 187 QALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + L   D +  PE  Y G Y+  + +++ D +  E L+   E+ LP  +D+S + ++  I
Sbjct: 188 ELLGQADKAPFPEDGYKGDYIYDLARQVIDDHGDEYLSVDLEESLPFFRDFSSKVILDGI 247

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DLK   +  D + SE   +  D   + D ++ L ++GY YE                +
Sbjct: 248 KADLKRFGVTFDCWFSEKSLYEND--QVLDTVEALRKRGYSYE----------------E 289

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              + FRST  GDD DR L +S+G  TYFA+D+AY K K++RGFD  I V G+DH GYV 
Sbjct: 290 DGAIWFRSTDFGDDKDRVLFRSNGVPTYFASDVAYHKNKFDRGFDLAIDVWGADHHGYVP 349

Query: 366 RLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           R+ A   A+ +       V L + V L RDG  + MS R+G F+TL  V+DEVG D+ RF
Sbjct: 350 RMRAAVEALGKSPDDNFAVTLIQFVNLLRDGEQVSMSTRSGQFVTLSDVIDEVGVDATRF 409

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + R++   LDFD    K +S +NPVFYVQYA AR  SI R  +D        +   + 
Sbjct: 410 YFVMRRSDSHLDFDLELAKRESSDNPVFYVQYANARIASITRNLRDKG----IAMPSVDE 465

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           + +     + E +LI  L+ +P  +E A +   P+++  Y++DLA  FH  ++  R    
Sbjct: 466 LDESLISSSEEKKLITRLSMFPEEVEKAAVEMAPHRIVNYVHDLAGDFHSFYNAHR---- 521

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   N      R+ LV A   ++ + L I+G+ +P  M
Sbjct: 522 ---VLDENPS-RPSRILLVKATHVVLTNALRILGISAPERM 558


>gi|126652598|ref|ZP_01724762.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126590589|gb|EAZ84706.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 555

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 197/587 (33%), Positives = 322/587 (54%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  L +   K  + +   +  I +E P+D A+G  +TN AM L++    
Sbjct: 1   MNAVEQVQQAIKAALAQAVKKAGLVEADTELTIHLETPKDKANGDYATNIAMQLTKLAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE I+  +  +  D++ + IAG GF+N+ +   +L  +++ ++  G +YGR+  G
Sbjct: 61  PPRAIAEAILENLDTEGTDIEKIDIAGPGFMNITVRKDFLTGVVTQVIEQGADYGRSNAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV IEFVSANPTG +H+GH R A VGD+L +++  +GY V+REYYINDAG QIN LA
Sbjct: 121 AGEKVQIEFVSANPTGDLHLGHARGASVGDSLCNVLDMAGYSVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY+QAL   D+++PE  Y G  +  +  +LA ++   +L   +E+     + + +
Sbjct: 181 NSLEARYKQAL-GLDAEMPEDGYHGPDIIEIAGKLAIEHGDAILTKSDEERFAFFRQHGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL    +  D++ SE   +  +   I   +D L   G+V+E          
Sbjct: 240 ALELDKLKTDLANFRVNFDVWYSETSLY--ENGKIEVALDKLKANGHVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K  RGFD +I + G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHEDKIVRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   +  + V + ++V+LY++G   KMSKR G+ +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+  +       +DFD      QS ENPV+Y QYA+AR  SI R A +       +
Sbjct: 402 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRSANEQGFAATSE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                           E+ L+  + ++P+V+ +A   + P+++A Y+ + A+ FH  ++ 
Sbjct: 462 NLNL-------LTAEKEIDLLKKIGDFPQVVADAAKHRTPHRIANYIQETAAAFHSFYNA 514

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A+N++LT  RL L+ AV + I + L +IGV +P +M
Sbjct: 515 E------KVLDASNKELTEARLALITAVRTTIANALRLIGVSAPEKM 555


>gi|119384607|ref|YP_915663.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166232819|sp|A1B373|SYR_PARDP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119374374|gb|ABL69967.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 581

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 269/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF+D  + +   L +++   ++   +    + +E PRD AHG ++TNAAM+L++P G 
Sbjct: 1   MNLFSDIRTLVIGALAQMEQAGELPAGLDTANVTVEPPRDAAHGDMATNAAMVLAKPAGK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + AR+  DP + S  +AG GF+NL L     + ++ + +  G +YGR+ +G+
Sbjct: 61  KPRDIAEALAARLAADPRIASAEVAGPGFLNLRLVSGEWQSVVRAALAEGGDYGRSEMGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G ++N+EFVSANPTGPMHVGH R AV GD LA+L+ FSG+EVTREYYIND GAQ++ LA 
Sbjct: 121 GQRINVEFVSANPTGPMHVGHTRGAVFGDALAALLDFSGHEVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S + RY++A    + ++ EG YPG YL  VG+ L  KY   LL+ PEE+WL  V+D++ +
Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKTKYGETLLDKPEEEWLAEVRDFATR 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL  LN+  D+F SE   +      I   I+ L + G +YEG+L PPK KT 
Sbjct: 240 AMMDMIREDLALLNVHMDVFSSEKALY--GTGRIEAAIERLRQAGLIYEGVLEPPKGKTP 297

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R+Q LFRST  GDDVDRP+ KSDGS+TYFA D+AY   K ERG+D +I V G+D
Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHWDKIERGYDALIDVFGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYVKR+ A   A+S+ +  ++V L +LVRL+++G P KMSKRAG F+TLR VV++ G+
Sbjct: 357 HGGYVKRMTAAVKALSDGRVPLDVKLIQLVRLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  RF ML RKN   LDFDF +V EQSK+NPV+YVQYA AR  S+  +A  +   +D   
Sbjct: 417 DVTRFHMLTRKNDAALDFDFARVLEQSKDNPVWYVQYASARVNSVLNKAAGMG--VDTTD 474

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                         +EL+L   +AE+PR +E A  A EP+++AF+LYD+AS  H  W+ G
Sbjct: 475 AALAQADLAQLSHPAELELARKVAEWPRTVEIAARAHEPHRIAFFLYDIASELHSLWNRG 534

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + P LRF+Q  +      ++ L  +V  +I++GL I+GV    EM
Sbjct: 535 NDEPALRFLQEGDPAAMAAKIALARSVGVVISAGLGILGVTPAKEM 580


>gi|312142763|ref|YP_003994209.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903414|gb|ADQ13855.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 553

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 219/581 (37%), Positives = 334/581 (57%), Gaps = 38/581 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A   S L   LK+   + ++E + +  I +E+PR+  HG  +TN AM  +   G++P  I
Sbjct: 11  AKLISALAESLKKAIYEGELELEGVPEISVEQPREKEHGDYATNLAMAAASQAGMNPRKI 70

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE+IV   + +   + + IAG GFIN  L  ++L + L  I     +YG+   G+G +V 
Sbjct: 71  AEIIVDNFEGEGV-EEISIAGPGFINFKLKKNWLYENLKLINKLKDDYGKIDTGQGKRVQ 129

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IEFVSANPTGP+HVGH R AVVGD  AS+M  +GY+V REYYINDAG Q++ LA S   R
Sbjct: 130 IEFVSANPTGPLHVGHSRGAVVGDVCASIMEAAGYDVEREYYINDAGNQMDILAESTLLR 189

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y++ +   +  LPE  Y G Y+  + ++L  +Y  ++L   E+K L I ++++ Q M++ 
Sbjct: 190 YRE-ICGKEIKLPEDVYAGDYVIEIAEDLYQEYGRDILEEEEQKQLDICREFAYQDMLQK 248

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++DL    I+ D + SE   H   P+ I + +D L  +GY+YE                
Sbjct: 249 IKEDLNKFGIEFDNWFSERTLH---PAKINEAVDVLRDKGYIYE---------------- 289

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   L F+S+  GDD DR ++KSDGS TY AAD+AY   K ERGFD +I V G+DH GY+
Sbjct: 290 EEAALWFKSSEFGDDKDRVVIKSDGSPTYLAADIAYHLDKLERGFDKLINVWGADHHGYI 349

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++AV  A    +  + +++ ++V L R+G  ++MSKRAG F+T+  V +EVG+D+ R+
Sbjct: 350 PRMKAVIEAFGYGRDTLEIIVVQMVNLLRNGEKMQMSKRAGSFVTMNEVNEEVGTDAARY 409

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + R     LDFD    KE+S  NPV+YVQYA+AR  SI   A+      +  L     
Sbjct: 410 YYIMRSTDSHLDFDLELAKEESSNNPVYYVQYAHARIHSIIDNAEIEPDSENLKLLS--- 466

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E+ L+  LA +P  I+ +  +++P+ L  Y YDLA+ FH  +++ R    
Sbjct: 467 -------DPAEVDLMKMLASFPEEIKLSAESRQPHHLTAYAYDLATAFHAFYNNCR---- 515

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V  +N +L+  RL LV A   ++ + L ++G+ +P EM
Sbjct: 516 ---VNTDNNELSGARLYLVDAARQVLKNVLTLLGISAPAEM 553


>gi|169826545|ref|YP_001696703.1| arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168991033|gb|ACA38573.1| Arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 556

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 196/587 (33%), Positives = 321/587 (54%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  L +   K  + +   +  I +E P+D A+G  +TN AM L++    
Sbjct: 2   MNAVEQVQQAIKAALAQAVKKAGLVEADTELMIHLETPKDKANGDYATNIAMQLTKLAKK 61

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE I+  +     D++ + IAG GF+N+ +   +L  +++ ++  G +YGR+  G
Sbjct: 62  PPRAIAEAILENLDTAGTDIEKIDIAGPGFMNITVRKDFLTGVVTQVLEQGNDYGRSNAG 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+ IEFVSANPTG +H+GH R A VGD+L +++  +GY V+REYYINDAG QIN LA
Sbjct: 122 AGEKIQIEFVSANPTGDLHLGHARGASVGDSLCNVLDMAGYSVSREYYINDAGNQINNLA 181

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY+QAL   D+++PE  Y G  +  +  +LA ++   +L   +E+     + + +
Sbjct: 182 YSLEARYKQAL-GLDAEMPEDGYHGPDIIEIAGKLAKEHGDAILAKSDEERFAFFRQHGL 240

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL    +  D++ SE   +  +   I   +D L   G+V+E          
Sbjct: 241 ALELDKLKTDLANFRVNFDVWYSETSLY--ENGKIEVALDKLKANGHVFE---------- 288

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K  RGFD +I + G+
Sbjct: 289 ------EDGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHEDKIVRGFDKLINIWGA 342

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   +  + V + ++V+LY++G   KMSKR G+ +T+R +V+EVG
Sbjct: 343 DHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 402

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+  +       +DFD      QS ENPV+Y QYA+AR  SI R A +       +
Sbjct: 403 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRSANEQGFAATSE 462

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                           E+ L+  + ++P+V+ +A   + P+++A Y+ + A+ FH  ++ 
Sbjct: 463 NLTL-------LTAEKEIDLLKKIGDFPQVVADAAKHRTPHRIANYIQETAAAFHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A+N++LT  RL L+ AV + I + L +IGV +P +M
Sbjct: 516 E------KVLDASNKELTEARLALITAVRTTIANALRLIGVSAPEKM 556


>gi|47093569|ref|ZP_00231328.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226225108|ref|YP_002759215.1| arginyl tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511650|sp|C1KYX7|SYR_LISMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|47018040|gb|EAL08814.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225877570|emb|CAS06284.1| arginyl tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328465162|gb|EGF36430.1| arginyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 556

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQGVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|217963335|ref|YP_002349013.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782969|sp|B8DBE8|SYR_LISMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|217332605|gb|ACK38399.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307572087|emb|CAR85266.1| argS [Listeria monocytogenes L99]
          Length = 556

 Score =  588 bits (1516), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIAHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|46908732|ref|YP_015121.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|254826340|ref|ZP_05231341.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854387|ref|ZP_05243735.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255519904|ref|ZP_05387141.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300766060|ref|ZP_07076028.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461793|sp|Q71WL8|SYR_LISMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46882004|gb|AAT05298.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|258607786|gb|EEW20394.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293595581|gb|EFG03342.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300513206|gb|EFK40285.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 556

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|290892723|ref|ZP_06555715.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290557783|gb|EFD91305.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 556

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIAHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|312879774|ref|ZP_07739574.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783065|gb|EFQ23463.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 558

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 209/588 (35%), Positives = 324/588 (55%), Gaps = 36/588 (6%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILD----RIVIERPRDCAHGHLSTNAAMILSRPLGL 59
             D    L+  ++ +   +  EK        R+++ERPR    G  + NAAM L++   L
Sbjct: 1   MEDMREALQKKVEAVLASLAQEKGTALPEGFRVLLERPRRSGQGDWACNAAMQLAKTFSL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A  +  R+  D  +    +AG GF+NL LSP ++++++  I+    +YGR  +G+
Sbjct: 61  SPRDLATQLAERLGKDDLLAGAEVAGPGFLNLTLSPVWVKELVGRILDQKEDYGRVDVGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV +EFVSANPTGP+H+GH R A VGD  AS++AF+G++V REYYINDAG Q+  L  
Sbjct: 121 GRKVQVEFVSANPTGPLHMGHGRGAAVGDIAASVLAFAGWKVEREYYINDAGLQMELLGR 180

Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           S   RY + L   +++ LPE  Y G Y+  + +++ ++      + PEE+ LP   D + 
Sbjct: 181 SARSRYFELLGRGDEAPLPEDGYHGEYMTDLARQILEEEGPGWADLPEEEALPRFSDATA 240

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + ++  IR DL+A  +  D++ SE   ++ D   ++  I+ L  +GY Y+          
Sbjct: 241 KRVLDWIRRDLEAFGVVFDVWFSEKSLYQDD--QVQRAIEALKGRGYAYDA--------- 289

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     + FRST  GDD DR +++S+G+ TYF +D+ Y K KY+RGFD ++ V G+
Sbjct: 290 -------DGAVWFRSTAFGDDKDRVMIRSNGAPTYFTSDVVYHKNKYDRGFDLVVNVWGA 342

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+++  +A+      + V+L +LV L R G P+ MSKRAG FITL+ V+DEVG
Sbjct: 343 DHHGYIPRMKSAVSAMGRDPEDLQVMLIQLVNLLRGGEPVSMSKRAGTFITLQDVMDEVG 402

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDF 477
            D+ RF  + R+    LDFD    K+ S +NPVFYVQYA+AR  SI R+ +    P    
Sbjct: 403 VDATRFFFVMRRCDSHLDFDLELAKKSSSDNPVFYVQYAHARICSILRETEARGLPSPTP 462

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +    N++         EL L   LA +P  I  A    EP+++A+Y  +LA  FHG ++
Sbjct: 463 EDLDPNLLST-----PEELALATVLARFPEEIRKAAEGLEPHRVAYYAQELAEAFHGFYN 517

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R       +      L   R+ L+ A    + + L ++GV +P  M
Sbjct: 518 AAR-------ILGVEEPLRKARMLLLEATRITLVNALRLLGVRAPERM 558


>gi|56965653|ref|YP_177387.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81364951|sp|Q5WB34|SYR_BACSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56911899|dbj|BAD66426.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 556

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 200/587 (34%), Positives = 313/587 (53%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M        +L+  ++    + ++  +  +  +++E P+D AHG  +TN AM L+R    
Sbjct: 1   MNHMERKKEQLRVEVRRAVLQAELATESEVPSVLLEAPKDKAHGDFATNIAMQLARIAKK 60

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA        ++ + IAG GFIN +L   YLR+++  ++    +YG + +G
Sbjct: 61  APRAIAEELVANFDRKQAGIEKIEIAGPGFINFFLDNGYLRELIPQVLTEKDDYGSSDVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KV IEFVSANPTG +H+GH R A VGDT+A++M  +GY+V+REYYINDAG QI  LA
Sbjct: 121 QGEKVLIEFVSANPTGDLHLGHARGAAVGDTIANIMDKAGYKVSREYYINDAGNQIENLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY Q L   D  +PE  Y G  +  + K+L D+   +     E++ L  ++DY +
Sbjct: 181 ASLNARYLQVL-GEDQPMPEDGYHGQDIIDIAKQLVDEAGDQYRQLDEKERLAFMRDYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I+ DL A  ++ D + SE   +  +   +   +  L  +   YE          
Sbjct: 240 KKELEKIKQDLNAYRVEFDKWFSETSLY--ESGQVERGLQVLKDKNETYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        RST  GDD DR L+K DG+YTY   D++Y   K++RG D +I V+G+
Sbjct: 288 ------KDGATWLRSTAYGDDKDRVLVKQDGTYTYLTPDISYHLDKFDRGHDRLIDVLGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+    A+ NV + ++V L++ G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMRAAIQALGYDPARFNVQIIQMVSLFQGGEKVKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD      +S ENPV+Y+QYA+AR  SI RQ +++      +
Sbjct: 402 VDATRYFFAMRSPDTHLDFDMDLAVSKSNENPVYYIQYAHARVCSILRQGEELGIPYSAN 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +          E +L+  + E+P  +  A   Q P ++A Y YDLA   H  ++ 
Sbjct: 462 TDLSPIAS------EKEYELLKAIGEFPGAVAEAATKQIPQRIANYAYDLAQALHSFYN- 514

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  R +   N+ L+  RL L+ A    I + L ++GVE+P +M
Sbjct: 515 -----VTRVIDTENKDLSAARLALMKATQMTIKNALALLGVEAPEKM 556


>gi|254932197|ref|ZP_05265556.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583753|gb|EFF95785.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328471050|gb|EGF41959.1| arginyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332312990|gb|EGJ26085.1| Arginyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 556

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|296114981|ref|ZP_06833625.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978443|gb|EFG85177.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 629

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 261/600 (43%), Positives = 376/600 (62%), Gaps = 22/600 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF  + S ++  L ++     +   I+ R+ +   RD +HG L+TNAA+++++     P 
Sbjct: 34  LFVRYLSHVREALGQVVP--HLPPAIVARVEVTPTRDPSHGDLATNAALLVAKVARRKPA 91

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +   ++  P + +   AG GF+NL L+P+ L+++ + ++ +G  YG   +G G K
Sbjct: 92  DIAADLARVLESVPGITAAQAAGPGFVNLKLAPAVLQEVAAQVLRAGDSYGDGHVGDGVK 151

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L++ +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 152 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLSKAGYGVTKEYYINDAGAQVTALAWAAY 211

Query: 183 WRYQQAL-----YNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY QA+      +  + L  G   Y G YL  VG+ELA ++ + L        P + W+
Sbjct: 212 WRYLQAIGTTLTQDEFAALVPGGIQYGGDYLVPVGEELAARHGTSLAADGGRPAPVDVWM 271

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V+  +V  MM +IR+DL+AL + HD+F SE              ID L  +G +YEG+
Sbjct: 272 QTVRTETVARMMAMIREDLEALGVHHDVFTSEAKILA--DGETNRAIDRLTAKGLIYEGV 329

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG D
Sbjct: 330 LEPPKGKLPEDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIARGAD 388

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +I V G+DH GYV R++A  AA+ +  K +++VLLC++VR+ RDG P++MSKRAG F+T
Sbjct: 389 VLIDVWGADHGGYVTRMKAAVAALGQDGKPELDVLLCQIVRIVRDGQPVRMSKRAGTFVT 448

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR ++DEVG D+VRF ML RK    ++FD  +V  QS++NPVFYVQYA+ARC S+ R A 
Sbjct: 449 LRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCCSVLRGAA 508

Query: 470 DIFP----DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++        D        +        +EL L+  +A++PRV+E+A IA EP+++AFYL
Sbjct: 509 ELAQAGRLAGDLSAEALAALDLSGLSSDAELALLGRMAQWPRVVESAAIAHEPHRIAFYL 568

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +LA+ FH  W+ GR++  LRF+  ++ +LT  +L LV A A +I SGL ++GVE   EM
Sbjct: 569 QELAADFHALWNRGRDDATLRFLHEDDAQLTRTKLALVEATARVIRSGLRVLGVEPVKEM 628


>gi|116873927|ref|YP_850708.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461434|sp|A0ALP7|SYR_LISW6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116742805|emb|CAK21929.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 556

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + + +  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLPEVEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL +++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTELVPVILTEDHKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVNTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLATAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTQARLSLIKTAQITLRNGLTLLGVSAPEKM 556


>gi|16801767|ref|NP_472035.1| arginyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|21542253|sp|Q927T2|SYR_LISIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|16415242|emb|CAC97932.1| arginyl tRNA synthetase [Listeria innocua Clip11262]
          Length = 556

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDTKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ANMSLLETEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|23100470|ref|NP_693937.1| arginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|38372527|sp|Q8EM45|SYR_OCEIH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22778703|dbj|BAC14971.1| arginine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 556

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 208/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      +LK  +       ++  +  +  I++E+P+D AHG  +TN AM L+R    
Sbjct: 1   MNVLEQTEQKLKEQIHHAVIHAELATEDQVPDIILEKPKDKAHGDFATNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IA+ I +++ K +  V+ V IAG GFIN ++   +L +++ +++ +G  YG++  G
Sbjct: 61  APRQIADDIASKLNKSEASVEKVEIAGPGFINFFMKQDFLGEVIDTVLSAGDNYGKSTGG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVS NPTG +H+GH R A  GD L ++ A +GYEV REYYINDAG QIN L 
Sbjct: 121 NGEKVQVEFVSVNPTGDLHLGHARNAAFGDVLCNVFAAAGYEVEREYYINDAGNQINNLG 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY Q +   D D+PE  Y G  +  + KEL  K   +  +   E+ L   K+Y +
Sbjct: 181 LSVEARYLQEI-GQDVDMPEDGYQGQAIIEIAKELVKKDGEKWADKDHEERLDFFKEYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +A ++ I  DLK   ++ D + SE    +     I D +  L   GY +E          
Sbjct: 240 KASLRNIESDLKDFRVEFDHWFSERSLFK--DGQIDDTLAVLDDGGYTFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L F++T  GDD DR L+K DG+YTY   D+AY K K +RGFD +I V GS
Sbjct: 288 ------KDGALWFKTTEFGDDKDRVLIKGDGNYTYLTPDIAYHKNKLDRGFDRIINVWGS 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     + +V + ++V L+  G  +KMSKR G  ++LR ++DEVG
Sbjct: 342 DHHGYIPRMRAALQALGYPVEKFDVKIIQMVNLFEAGEKVKMSKRTGKAVSLRELMDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+  + R N   LDFD    K QS +NPV+Y QYA+AR  ++  QAK    + + +
Sbjct: 402 IDAVRYYFVARSNDSQLDFDMDLAKSQSNDNPVYYAQYAHARICTMLSQAKSKGFNTEAE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            F  +++  E E D     L+  + E P++I +A     P+K+  Y+++LA++ H  ++ 
Sbjct: 462 -FDASLLTAEKELD-----LLKKIGELPQMIVDAADKHTPHKVTQYIFELATLLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A+N   T  R+ L+ AV   + + + IIG+ +P +M
Sbjct: 516 E------KVLDADNEARTHARIALMKAVRQTLANAMTIIGISAPEKM 556


>gi|254993097|ref|ZP_05275287.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 556

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 322/587 (54%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   +      
Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFXXXXX 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                  R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 XXXXXXXRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|299537939|ref|ZP_07051225.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726521|gb|EFI67110.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 555

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 195/587 (33%), Positives = 319/587 (54%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  + +   K   +E      I +E P+D A+G  +TN AM L++    
Sbjct: 1   MNAVEQVQQAIKAAIVQAVEKAGLIEAGTELSIHLETPKDKANGDYATNIAMQLTKLAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE I+  +     D++ + IAG GF+N+ +   +L ++++ ++  G +YGR+  G
Sbjct: 61  PPRAIAEAILENLDTTGTDIEKIDIAGPGFMNITVRKDFLTEVVTQVLEQGTDYGRSNAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTG +H+GH R A VGD+L +++  +GY V+REYYINDAG QIN LA
Sbjct: 121 AGEKVQVEFVSANPTGDLHLGHARGASVGDSLCNVLDMAGYSVSREYYINDAGNQINNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY+QAL    +++PE  Y G  +  +  +LA ++   +L   +++     + + +
Sbjct: 181 YSLEARYKQAL-GMKAEMPEDGYHGQDIIDIAGKLAKEHGDAILAKSDDERFAFFRQHGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  ++ DL    +  D++ SE   +  +   I   +D L   G+V+E          
Sbjct: 240 ALELDKLKTDLANFRVNFDVWYSETSLY--ENGKIEVALDKLKANGHVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K+DGS+TY   D+AY + K  RGFD +I + G+
Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHEDKIVRGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   +  + V + ++V+LY++G   KMSKR G+ +T+R +V+EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+  +       +DFD      QS ENPV+Y QYA+AR  SI R A +        
Sbjct: 402 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRSANEQG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            F              E+ L+  + ++P+V+  A   + P+++A Y+ + A+ FH  ++ 
Sbjct: 456 -FAATTEHLNLLTAEKEIDLLKKIGDFPKVVAEAAKHRTPHRIANYIQETAAAFHSFYNA 514

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + A+N++LT  RL L+ AV + I + L +IGV +P +M
Sbjct: 515 E------KVLDASNKELTEARLALITAVRTTIANALRLIGVSAPEKM 555


>gi|16804599|ref|NP_466084.1| arginyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47097104|ref|ZP_00234673.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224500484|ref|ZP_03668833.1| arginyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503648|ref|ZP_03671955.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829538|ref|ZP_05234225.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254900987|ref|ZP_05260911.1| arginyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913799|ref|ZP_05263811.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938188|ref|ZP_05269885.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255025720|ref|ZP_05297706.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|284802999|ref|YP_003414864.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996140|ref|YP_003417908.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|21542250|sp|Q8Y493|SYR_LISMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|16412049|emb|CAD00639.1| arginyl tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47014509|gb|EAL05473.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258601953|gb|EEW15278.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610800|gb|EEW23408.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284058561|gb|ADB69502.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061607|gb|ADB72546.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293591816|gb|EFG00151.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 556

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + ++  EE+   I +  ++
Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSIFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLAS FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|315644448|ref|ZP_07897581.1| arginyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280198|gb|EFU43491.1| arginyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 559

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 204/565 (36%), Positives = 306/565 (54%), Gaps = 31/565 (5%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDS 80
             V ++ L  I +E P+D +HG L+TNAAM L+R    +P  IAE I+  +      ++ 
Sbjct: 25  GLVSREELPAITLEVPKDKSHGDLATNAAMQLTRIAKKNPRQIAEAILEHLDTAKASIEK 84

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFIN  L   YL  I++ +   G  YGR  IG+G KV +EFVSANPTG +H+GH
Sbjct: 85  AEIAGPGFINFTLDKGYLYPIVALVQEQGDNYGRITIGEGQKVQMEFVSANPTGSLHLGH 144

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A VGD L +++ ++GYEVTREYYINDAG Q+  L  S+  RY Q L   D+++PE  
Sbjct: 145 ARGAAVGDALCNVLDYAGYEVTREYYINDAGNQVVNLIKSLEARYLQEL-GQDAEMPEDG 203

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  +K   KEL  +    LL+    +     +++ ++  +  I+ DL    +  D + 
Sbjct: 204 YHGEDIKGFAKELVAEKGDSLLSMSPGERTAFFREFGLEKELGKIKRDLNRFRVHFDEWF 263

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +  +   +   ++ L  +G  YE                       R+T  GDD 
Sbjct: 264 SETSLY--EDGLVEKSLEELRSKGEAYE----------------KDGATWLRTTDYGDDK 305

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+K+DG+YTY   D+AY + KYERG+D ++ + G+DH GYV R++A   A+     +
Sbjct: 306 DRVLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDK 365

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD  
Sbjct: 366 LIVLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMD 425

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
                S ENPVFYVQYA+AR  S+FRQA++       +L P   +         E  ++ 
Sbjct: 426 LAVSTSNENPVFYVQYAHARICSVFRQAEEQG----INLLPLAEVNLSVLTAEHEYDILR 481

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            + E P+ +  A     P++L  Y+Y+LAS FH ++   R       V   +   T  RL
Sbjct: 482 KIGELPQEVSLAADNYAPHRLIRYVYELASSFHSYYRAER-------VITEDADQTQARL 534

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+ AV ++I + L ++GV +P  M
Sbjct: 535 ALLGAVRTVIANVLRLMGVSAPERM 559


>gi|313617044|gb|EFR89624.1| arginyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 556

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDSKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +++ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLEAEFPEDGYRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ANMSLLETEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|329930208|ref|ZP_08283821.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328935230|gb|EGG31711.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 559

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 203/563 (36%), Positives = 304/563 (53%), Gaps = 31/563 (5%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVF 82
           V ++ L  I +E P+D +HG L+TN AM L+R    +P  IAE I+  +      ++   
Sbjct: 27  VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN  L   YL  I++ +   G  YGR   G+G KV +EFVSANPTG +H+GH R
Sbjct: 87  IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIATGEGQKVQMEFVSANPTGSLHLGHAR 146

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A VGD L +++ F+GYEVTREYYINDAG Q+  L  S+  RY Q L   D+++PE  Y 
Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G  +K   KEL  +    LL+    +    ++ + ++  +  I+ DL    +  D + SE
Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPGERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  +   +   ++ L  +G  YE                       R+T  GDD DR
Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE----------------KDGATWLRTTDYGDDKDR 307

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+K+DG+YTY   D+AY + KYERG+D ++ + G+DH GYV R++A   A+     ++ 
Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD    
Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              S ENPVFYVQYA+AR  S+FRQA++        L P   +         E  ++  +
Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQG----VSLLPLADVNLSVLTAEHEYDILRKM 483

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            E P+ +  A     P++L  Y+Y+LAS+FH ++   R       V   +   T  RL L
Sbjct: 484 GELPQEVSLAAENYAPHRLIRYVYELASLFHSYYRAER-------VITEDANQTQARLAL 536

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + AV ++I + L ++GV +P  M
Sbjct: 537 LGAVRTVIANVLRLMGVSAPERM 559


>gi|261403996|ref|YP_003240237.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280459|gb|ACX62430.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 559

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 202/563 (35%), Positives = 304/563 (53%), Gaps = 31/563 (5%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVF 82
           V ++ L  I +E P+D +HG L+TN AM L+R    +P  IAE I+  +      ++   
Sbjct: 27  VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN  L   YL  I++ +   G  YGR   G+G KV +EFVSANPTG +H+GH R
Sbjct: 87  IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIASGEGQKVQMEFVSANPTGSLHLGHAR 146

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A VGD L +++ F+GYEVTREYYINDAG Q+  L  S+  RY Q L   D+++PE  Y 
Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G  +K   KEL  +    LL+   ++    ++ + ++  +  I+ DL    +  D + SE
Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPDERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +  +   +   ++ L  +G  YE                       R+T  GDD DR
Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE----------------KDGATWLRTTDYGDDKDR 307

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            L+K+DG+YTY   D+AY + KYERG+D ++ + G+DH GYV R++A   A+     ++ 
Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL+ ++V L++DG  +KMSKR G  +T+  ++DEVG D++R+    R     LDFD    
Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              S ENPVFYVQYA+AR  S+FRQA++          P   +         E  ++  +
Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQG----VSFLPLADVNLSVLTAEHEYDILRKM 483

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            E P+ +  A     P++L  Y+Y+LAS+FH ++   R       V   +   T  RL L
Sbjct: 484 GELPQEVSLAAENYAPHRLIRYVYELASLFHSYYRAER-------VITEDANQTQARLAL 536

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           + AV ++I + L ++GV +P  M
Sbjct: 537 LGAVRTVIANVLRLMGVSAPERM 559


>gi|313622316|gb|EFR92809.1| arginyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 556

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPGLKKDSKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +++ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLEAEFPEDGYRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ANMSLLETEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|289435829|ref|YP_003465701.1| hypothetical protein lse_2468 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172073|emb|CBH28619.1| argS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 556

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 211/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E   +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQVKLIQHIKQAVVQAVGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+     YG++  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +GY V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGYNVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   ++D PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLEADFPEDGYRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 DFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   D+  +
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|254831015|ref|ZP_05235670.1| arginyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 556

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLVEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMNMAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+K+DGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKTDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   ++  D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A   + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLATAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|282857140|ref|ZP_06266386.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585075|gb|EFB90397.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 559

 Score =  584 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 209/581 (35%), Positives = 318/581 (54%), Gaps = 31/581 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + +   L+ I  +   +   L  +  ERP+   HG  +TNAAM   RPLG  P  +AE
Sbjct: 8   LKALVWGALEAIAREKGKDPASLGELHFERPKQENHGDWATNAAMQNCRPLGCKPRDLAE 67

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I  RI  D  +  V +AG GFIN YLS  ++  I+  ++ +G +YGR  +GKG K  +E
Sbjct: 68  DIARRIGSDRRIRRVEVAGPGFINFYLSNLWMGDIVRDVLAAGSDYGRVDLGKGRKAQVE 127

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD   ++++F+G+ V +EYY+NDAG Q+N L  S   RY 
Sbjct: 128 FVSANPTGPLHVGHGRGAAVGDVTGNILSFAGWNVEKEYYVNDAGLQMNILGRSTQSRYF 187

Query: 187 QALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + L        PE  Y G Y+  + +E+ D    E L  P E+ LP  + Y+   +++ I
Sbjct: 188 ELLGRPEKFPFPEESYKGRYIYDIAQEVVDARGEEFLERPLEESLPFFRTYAAGRILEQI 247

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++L    +  D F SE   +  D   +   +  L  +G++YE                 
Sbjct: 248 KNELGEFGVTFDNFFSEKSLY--DRDLVAAAVQTLKERGHLYE----------------Q 289

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            + L FRST  GDD DR L++S+G  TYF +D+AY K K++RGF+ +I V G+DH GYV 
Sbjct: 290 DEALWFRSTEYGDDKDRVLMRSNGVPTYFTSDIAYHKEKFDRGFERVIDVWGADHHGYVP 349

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   A+     +  +LL + V L RDG  +KMS R+G F+ L+ VV EVG D+ R+ 
Sbjct: 350 RMKAAIEALGYDPKKFTILLIQFVNLLRDGEQVKMSTRSGQFVELQEVVREVGVDAARYY 409

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNV 484
            L R++   LDFD    K QS +NPV+YVQYA+AR  SI ++A +    +     F  +V
Sbjct: 410 FLMRRSDSHLDFDLELAKSQSADNPVYYVQYAHARLCSILQKAAEKGIAVPGVSAFDPDV 469

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I         E +L   LA++P  +  A    EP+++  Y+Y+LA  FH ++++G     
Sbjct: 470 IAT-----PEEKRLFTKLAQFPEEVGRAAADLEPHRIVSYVYELAGDFHSYYNNGGR--- 521

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   +  L    L +V A+ ++I + L ++G+ +P +M
Sbjct: 522 ---ILEESGALRDSHLLMVAAIRTVIANALRLLGISAPEKM 559


>gi|315283742|ref|ZP_07871832.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313612612|gb|EFR86664.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 556

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 320/587 (54%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILKEDEKYGESDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M+ +G++V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMSVAGFDVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + +N  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+       D
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQ------D 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L              +E  L+  L E+  V+  A   + P+++  YL DLA+ FH  ++ 
Sbjct: 456 LEVTEAADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIVRYLNDLAAAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|330993304|ref|ZP_08317240.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759706|gb|EGG76214.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 601

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 263/601 (43%), Positives = 376/601 (62%), Gaps = 23/601 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LFA + + +++ L+ I     +    L R+ +   RD AHG L+TNAA+++S+     P 
Sbjct: 5   LFARYLTHVRDALRTIMP--DLPDAALARVEVTPTRDPAHGDLATNAALVISKAARRRPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V  +   P +    +AG GF+N++L+P+  + +  +++ +G  YG +  G G K
Sbjct: 63  EIAAGLVTALATVPGIARAEVAGPGFVNMHLTPAVWQGVARAVLAAGEGYGTSTAGNGVK 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDVLANLLAKAGYAVTKEYYINDAGAQVIALAWATY 182

Query: 183 WRYQQALYNNDSD------LPEGY--YPGVYLKHVGKELADKYSSELLN-----FPEEKW 229
           WRY QAL  + S+      +P G   Y G YL  VG+ LA+++   L            W
Sbjct: 183 WRYLQALGTSVSEAEFAQSVPGGAIQYGGDYLVPVGRALAERHGDALAAPGLRPAEPALW 242

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  VK  +V  MM +IR+DL AL + HD+F SE              I  L  +G +YEG
Sbjct: 243 LDTVKTEAVDTMMGMIREDLAALGVHHDVFTSEAKILA--DGETDRAIAALDAKGLIYEG 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +L PPK K     +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG 
Sbjct: 301 VLEPPKGKLPDDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIRRGA 359

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D ++ V G+DH GYV R++A  AA++   +  ++VLLC++VR+ RDG P++MSKRAG F+
Sbjct: 360 DVLVDVWGADHGGYVTRMKAAVAALATDGRPVLDVLLCQIVRIVRDGQPVRMSKRAGTFV 419

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR ++DEVG D+VRF ML RK    ++FD  +V  QS++NPVFYVQYA+ARCRS+ R A
Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCRSVLRAA 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            ++     FDL        +++       +EL L+  +A++PR++E+A  A EP+++AFY
Sbjct: 480 AEMVEKGVFDLSTTPASLGDADLSGLTSDAELALLRRMAQWPRMVESAASAHEPHRIAFY 539

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L +LAS FH  W+ GR++  LRF+Q ++   T M+L LV A A+++ SG+ ++GV+   E
Sbjct: 540 LNELASDFHALWNRGRDDATLRFLQEHDVATTRMKLALVEATATVLRSGMKVLGVQPVEE 599

Query: 585 M 585
           M
Sbjct: 600 M 600


>gi|297585470|ref|YP_003701250.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143927|gb|ADI00685.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 555

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 200/587 (34%), Positives = 316/587 (53%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIE-RPRDCAHGHLSTNAAMILSRPLGL 59
           M    D   +LK  L +   +  + K+     V+   P+D +HG  ++N AM L+R    
Sbjct: 1   MSQVEDIKDQLKTELVQAVVEAGLAKEEEIPEVVIETPKDKSHGDYASNLAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE I A + ++   V++V IAG GF+N  +   YL  ++ +++    ++G   +G
Sbjct: 61  APKQIAEDIQANLDLEAASVETVEIAGPGFLNFTMKKDYLADVVKAVLAKQDDFGSTDVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G K+ +EFVSANPTG +H+GH R A VGD L  ++  +GY+VTREYYINDAG QI+ LA
Sbjct: 121 NGKKIQVEFVSANPTGTLHLGHARGAAVGDALCHILDKAGYDVTREYYINDAGNQIDNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS+  RY QAL   ++D+PE  Y G  +    +EL D Y     +          +++ +
Sbjct: 181 LSLEARYLQAL-GEEADMPEDGYQGKDIIGFAEELVDTYGDRFKDADPANRQAFFREFGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +++DL    +  D++ SE   +  +   + +I+++L  +   YE          
Sbjct: 240 KRELDKLKNDLNDYRVHFDVWFSETSVY--ENGQVEEILEDLKARDKTYEH--------- 288

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                       FRST  GDD DR L+K DGSYTY   D+AY   K++RGFD +I + G+
Sbjct: 289 -------EGATWFRSTDYGDDKDRVLVKGDGSYTYLTPDIAYHNDKFKRGFDEVINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   + Q++V + ++V L+ +G  +KMSKR G  +T+R +++EVG
Sbjct: 342 DHHGYIARMKAAVQALGYDEEQLSVQIIQMVNLFENGEKVKMSKRTGKAVTMRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD    K QS ENPVFYVQYA+AR  S+ RQAK+   + D  
Sbjct: 402 IDATRYFFAMRAADTHLDFDLDLAKSQSNENPVFYVQYAHARICSMIRQAKEKGFEPDPS 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                           E  L+  L E+P  + +A   + P+++  Y+++LA   H  ++ 
Sbjct: 462 ------ADLTKLTSEKEHDLMKKLGEFPEAVADAASRRLPHRITNYVHELAQALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       V  ++  LT  RL LV AV   + +GL+++GV +P +M
Sbjct: 516 DK-------VITDDEALTKARLALVEAVRITLRNGLSLVGVSAPEKM 555


>gi|147679179|ref|YP_001213394.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146275276|dbj|BAF61025.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 565

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 194/580 (33%), Positives = 319/580 (55%), Gaps = 31/580 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  L   L+       ++   +    +E PR+  HG  +TN A++L+RP  + P   AE
Sbjct: 16  LADALVRALQAARRSGAIKVDEVPDFTVEVPREKEHGDFATNLALLLARPARMAPRRAAE 75

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++           + V IAG GFIN YL+P+++ + L  I+  G +YGR   GKG KV +
Sbjct: 76  ILAQNFSQTGTWVERVEIAGPGFINFYLNPAWVYQALPRIIRLGEDYGRVNQGKGKKVQV 135

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTG +H+G+ R A +GD++A+++ F+GY+VTRE+YINDAG QI    LS+  RY
Sbjct: 136 EFVSANPTGLLHMGNARGAALGDSIAAILEFAGYDVTREFYINDAGNQIENFGLSLEARY 195

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            Q L   D  +PEG Y G  L    ++         L  P  +    +  +++   +  I
Sbjct: 196 MQ-LMGRDVPVPEGGYHGEDLVKTVRDFIAVNGDRHLALPPGERRAALVKFALADKLGAI 254

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L+   + +D++ SE   H  D   ++D ++ L   GY+YE                 
Sbjct: 255 KKTLEEFGVHYDVWFSEQSLH--DSGAVQDTLNYLREMGYIYEN---------------- 296

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L F++T  G D D  +++S+G  TYFA+D+AY + K++RGF+ +I + G+DH G+V 
Sbjct: 297 ENALWFKATSFGADKDEVVVRSNGVPTYFASDIAYHRNKFQRGFEWVINIWGADHHGHVP 356

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A  AA+    A ++V++ +LVRLY+ G  ++MSKR+G F+TL  +++EVG D+ R+ 
Sbjct: 357 RMKAAVAALGYDPAALDVVIMQLVRLYKGGELVRMSKRSGQFVTLEELMEEVGRDAARYF 416

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            + R +   LDFD    + +S ENPV+Y+QYA+AR  SI RQ ++   ++       + +
Sbjct: 417 FVMRSSDSHLDFDLDLARAESNENPVYYIQYAHARISSILRQLEERGEEVP----DPSQV 472

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 +  EL L   LA++P  + +A     P ++A YL++LA + H  ++  R     
Sbjct: 473 DYSLLKEEQELALARKLADFPEEVSSAARGLAPQRIARYLHELAGLLHSFYNSHR----- 527

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V  ++R+L+  RL LV A    + + L ++G+ +P  M
Sbjct: 528 --VITSDRELSRARLVLVSATRITLRNALGLLGLSAPERM 565


>gi|326388873|ref|ZP_08210455.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206473|gb|EGD57308.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 589

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 260/586 (44%), Positives = 353/586 (60%), Gaps = 16/586 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           LFA+F++ +   L  ++    +   +    +  E PRD AHG L+TNAAM+L++P G +P
Sbjct: 15  LFAEFAAVIDAALNALETAGTLPGGLARGAVTTEPPRDPAHGDLATNAAMVLAKPAGTNP 74

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A  +VA ++ DP V +  IAG GFINL L P      L  I   G +YGR+ +G G+
Sbjct: 75  RALATALVAELEKDPRVTAAEIAGPGFINLRLVPGAWLDELGLISALGADYGRSTVGGGS 134

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+G++V REYYINDAG Q++ LA SV
Sbjct: 135 IVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGHKVVREYYINDAGGQVDVLARSV 194

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +   +PEG YPG YL  VG+ LA ++       PE  WL + +  +V AM
Sbjct: 195 HLRYREALGQDVGAIPEGLYPGDYLVPVGQALAAEFGDRYAAAPEADWLVLFRTRAVAAM 254

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M +IR DL  L I HD+F SE +          +    L     VY+G L  PK K    
Sbjct: 255 MDMIRADLALLGIHHDVFSSEAELQAAGKPAAAEAW--LREHDLVYDGQLEAPKGKVADD 312

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            +     L FRST  GDD DRP+ KSDGS+TYF ADLAY   K E   D ++ + G+DH+
Sbjct: 313 WEPVELPL-FRSTRFGDDQDRPIRKSDGSWTYFGADLAYHFQKAET-ADALVDIWGADHA 370

Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           G VKR++A  AA++  + +     + L ++V+L RDG P+KMSKRAG F+TL  VV EVG
Sbjct: 371 GTVKRIKAAVAALTGAQGKPKPFEIKLVQMVQLLRDGQPVKMSKRAGTFVTLADVVREVG 430

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF ML RK    +DFDF KV E SK+NPVFYVQY +AR  S  R+A       +  
Sbjct: 431 KDVVRFTMLTRKPDAQMDFDFAKVVEASKDNPVFYVQYCHARVCSTLRKAAGEGFAPNAA 490

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                           EL LI   A++PR++E A  A+EP+++AF+LYDLA+ FH +W+ 
Sbjct: 491 ELA--------LLGDEELALIRLAAQFPRIVEGAAAAREPHRIAFFLYDLAAGFHAYWNL 542

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           G + P  R++ A+N  LT  RL L   V  ++ +GL I+GV +  E
Sbjct: 543 GNDRPDKRYIVADNPALTGARLFLAAQVGQVVRNGLAILGVTAAEE 588


>gi|284048956|ref|YP_003399295.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953177|gb|ADB47980.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 552

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 214/585 (36%), Positives = 321/585 (54%), Gaps = 33/585 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +  + + +++     K+ +  +  +V+  P   A G  +TN A+  +R     
Sbjct: 1   MDMKKVLAEAVADAVRKAIEAGKLSQGEMAPVVLTVPPQKAFGDFATNFALQAARNFHCA 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  +   +   P VD V IAG GF+N YL   +L + L +I+  G  YG      G
Sbjct: 61  PRVIAAAVQEYLDC-PSVDKVEIAGPGFLNFYLKEDWLGESLRAILDKGENYGNLPPKNG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ IE+VSANPTGP+HVGH R A VG  LASLM  +GY+VTREYYINDAG Q++ LALS
Sbjct: 120 EKIQIEYVSANPTGPLHVGHGRGAAVGSALASLMKAAGYDVTREYYINDAGNQMHNLALS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY + L++     PE  Y G  +K   + +  KY  + ++ PEE+ L   +  + + 
Sbjct: 180 VNARYLE-LFDIPCQFPENGYHGEDIKVTARRIKAKYGDKFIHMPEEERLEQFQTLAKEE 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +++DL+A N + D++ SE   H  D   I  ++D L  +GYVYE            
Sbjct: 239 KLAALKEDLEAFNCEFDVWFSEQSLH--DADKIHQVVDELQEKGYVYE------------ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                     FRST  GDD DR +++ +G  TYFAAD+AY + K++RGFD +I + G+DH
Sbjct: 285 ----KDGAKWFRSTAFGDDKDRVVIRDNGVSTYFAADIAYHQNKFQRGFDRVINLWGADH 340

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ R++A   A+    +++ VL+ ++V LYR+G  +KMSKR G  +TL  +++EVG+D
Sbjct: 341 HGYIPRVKAAMEALGYDPSRLEVLILQMVALYRNGELVKMSKRTGKSVTLNELIEEVGTD 400

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + RF  + R     LDFD     E S +NPV+YVQYA+AR  SI RQ ++    L  D  
Sbjct: 401 AARFFFIMRSMDSQLDFDLTLATEHSNDNPVYYVQYAHARICSILRQMEEEKIALRKD-- 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      +  E+ LI  L +Y  +IE A   + P+K+A Y+YDLA +FH  ++  R
Sbjct: 459 ----CDLSVLKEPIEVDLIKKLNDYEELIETAAAERAPHKIAHYVYDLAGLFHSFYNQCR 514

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V   +  +   RL L+ AV + +  GL I+GV +P+ M
Sbjct: 515 -------VLGVDPAVQQARLALITAVGNTLRHGLKILGVSAPDHM 552


>gi|121535669|ref|ZP_01667474.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305773|gb|EAX46710.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 556

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 205/584 (35%), Positives = 314/584 (53%), Gaps = 33/584 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVE----KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           D    L   + +   +           L  +++E P     G  +TN AM  +R    +P
Sbjct: 2   DIKQLLTETIAKAAREAMAAGAFRADELPPVMLEVPPQKEFGDYATNFAMQAARAAKTNP 61

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA+ IV RI+  P ++   IAG GFIN YL P +L  +L  I+ +G  YG    G+G 
Sbjct: 62  RVIAQAIVDRIQA-PWLEKAVIAGPGFINFYLKPGWLYDLLQRILAAGENYGNTDYGRGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +V +EFVSANPTGP+HVGH R A VG  L +L+  +GY+V  E+YINDAG+QI+ LA SV
Sbjct: 121 RVQVEFVSANPTGPLHVGHGRGAAVGSALVNLLRAAGYDVEAEFYINDAGSQIDHLAASV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY + L     + PE  Y G  +    + + D+  +  L     + L + K+ ++   
Sbjct: 181 NARYLELL-GQPVEFPEDGYRGRDIIDTAQRIIDREGARYLLVSPAERLAVFKELALSEK 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  +R+DL+A  +  D++ SE   H+     I    + L + G +YE             
Sbjct: 240 LAALREDLEAFGVTFDVWFSERTLHQ--TGAIAATCELLKKSGDIYE------------- 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  RST  GDD DR +++ +G  TY AAD+AY + K+ERGFD +I + G+DH 
Sbjct: 285 ---QDGALWLRSTAYGDDKDRVVIRDNGVPTYLAADIAYHRNKFERGFDTVINIWGADHH 341

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+ R++A  AA+    A++ VL+ ++V LY++G  +KMSKR G  +TL  +++EVG D+
Sbjct: 342 GYIARVKAAIAALGYDPARLEVLILQMVSLYQNGELVKMSKRTGQGVTLAELIEEVGRDA 401

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF  + R     LDFD    K ++ ENPV+Y+QYA+AR  SIFRQA++    +  + + 
Sbjct: 402 ARFFFIMRSADSQLDFDLDLAKSRTNENPVYYIQYAHARIASIFRQAEEAGIAVRPEEWT 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + +        +E+ LI  L EYP  I  A   + P+++A Y++DLA +FH  ++  R 
Sbjct: 462 EDKL--ACLTAETEIDLIKKLGEYPDEITAAARERAPHRIARYVHDLAGLFHAFYNQCR- 518

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +      L   RL LV AV  ++   L+I+GV +P +M
Sbjct: 519 ------IIGVEPALQNARLGLVTAVQRVLRHALSILGVTAPEKM 556


>gi|323490872|ref|ZP_08096070.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395480|gb|EGA88328.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 553

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 322/586 (54%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M         +K    E   K ++  + ++ + +E PRD  +G  +TN AM L+R     
Sbjct: 1   MNAVEQVQHAIKTAFAEAIEKAELTTEAVE-VQLESPRDKTNGDYATNIAMQLTRLAKKP 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE IVA +  D     +V IAG GFIN+ +   YL+ ++ +++   ++YGR+  G 
Sbjct: 60  PRAIAEAIVANLDKDAANIQTVDIAGPGFINITIKKDYLQDVVKTVLEQKVDYGRSTAGD 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +EFVSANPTG +H+GH R + VGD+L +++  +GY+V+REYYINDAG QIN LAL
Sbjct: 120 NERIQVEFVSANPTGDLHLGHARGSSVGDSLCNILDLAGYDVSREYYINDAGNQINNLAL 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL   DS +PE  Y G  +K + + L  ++  + ++   E+     +++ ++
Sbjct: 180 SIEARYFEALGKGDS-MPEDGYRGQDIKDIAEALVQEHGDKFVSMTHEERFETFREHGLK 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  ++ DL    ++ D++  E   ++     I + +  L   G+VYE           
Sbjct: 239 VELAKLQQDLADFRVEFDVWYPESSLYKN--GKIDEALAKLRENGHVYE----------- 285

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +     FRST  GDD DR L+K+DGSYTY   D+AY + K +RGF  +I V G+D
Sbjct: 286 -----EDGATWFRSTTFGDDKDRVLIKNDGSYTYLMPDIAYHEDKLQRGFGKLINVWGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R++A   A+   +  + V + ++V+LY+DG  +KMSKR G  +T+R +V+ VG 
Sbjct: 341 HHGYIPRMKAAIEALGYDRDTLEVSIIQMVQLYKDGEKMKMSKRTGKAVTMRELVELVGL 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VR+    R     +DFD      QS ENPV+Y QY +AR  SI RQA++       + 
Sbjct: 401 DAVRYFFAMRSGDSHMDFDLDLAVSQSNENPVYYSQYGHARISSILRQAEEQGLLASEEH 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E+ ++  + ++P+VI +A   + P+++  Y+ +LAS FH  ++  
Sbjct: 461 LNL-------LTSEKEIDVLKKIGDFPQVIADAAKQRAPHRITTYIQELASNFHSFYNAN 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + + A+N ++T  RL L+ AV + + + L  +GVE+P +M
Sbjct: 514 ------KVLDASNVEMTSARLALITAVKTTLANALKTVGVEAPEKM 553


>gi|313636233|gb|EFS02062.1| arginyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 556

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 209/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E   +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQVKLIQHIKQAVVQAVGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+     YG++  G
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G+ V+REYYINDAG QIN L 
Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGFNVSREYYINDAGNQINNLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS   RY +AL   +SD PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++
Sbjct: 181 LSAEARYFEAL-GLESDFPEDGYRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDAL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +R DL+   +  D + SE   +  + + +   ++ L   GY+YE          
Sbjct: 240 DFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+
Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KM  R G  +T+R +++EVG
Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMXXRTGKSVTMRDLIEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   D+  +
Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKE 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +++  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ FH  ++ 
Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNS 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556


>gi|152977542|ref|YP_001377059.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026294|gb|ABS24064.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 556

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 201/587 (34%), Positives = 324/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  +K    K ++  ++ +  +++E P+D  HG  STN AM L+R    
Sbjct: 1   MNSLEQVKELIKEEIKAAVLKAELATEEQIPNVILETPKDKTHGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE ++    K    ++ + IAG GFIN ++  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELITNFNKEKASIEKIEIAGPGFINFHMDNSYLTDLIPTIVKAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K+ +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKIQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++    +   E++     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIMEIGKRLAEEFGDRYVKADEKESYEFYRQYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL +  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLDSFRVKFDVWFSETSLYKN--GKIDAALAVLKERNEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRST  GDD DR L+K DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSTAYGDDKDRVLIKKDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+  +K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYEKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLHAGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E+ L+  L E+P  +  A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLVAS------EKEIDLLKKLGEFPAAVAEAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV   + + L ++GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRITLQNALALVGVSAPEKM 556


>gi|269792262|ref|YP_003317166.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099897|gb|ACZ18884.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 559

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 203/581 (34%), Positives = 325/581 (55%), Gaps = 32/581 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +++  + ++  +  VE     +I +ERP+    G  + +AAM L +  G++P  +A+
Sbjct: 9   LEDKIRGIVTQMAQERGVEIPGRAKIYLERPKREGQGDWACSAAMQLCKSFGVNPRELAD 68

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I A+I  DP V++V +AG GFIN+ LS  ++  ++  ++ +G +YGR   G G KV +E
Sbjct: 69  EISAKIAEDPSVETVEVAGPGFINITLSKGWVGDLIRRVISAGADYGRVNDGGGKKVQVE 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R A VGD  AS+++++G+ V REYYINDAG Q+  L  S   RY 
Sbjct: 129 FVSANPTGPLHMGHGRGAAVGDITASILSYAGWNVEREYYINDAGLQMEMLGRSARSRYF 188

Query: 187 QALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + +   +++  PE  Y G Y+  + +E+ D+    L + PEE+ +P+  D + +  +K I
Sbjct: 189 ELIGRGDEAPFPEEGYHGDYMYDIAREILDEKGPSLADLPEEEAVPLFTDLAYERTLKWI 248

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DL+   ++ D++ SE   + GD   +   I+ L  +GY YE                 
Sbjct: 249 KRDLEDFGLKFDVWFSERSLYVGD--QVERTIEALKARGYAYEA---------------- 290

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              + F+ST  GD+ DR L++S+G+ TYF +D+ Y K KY+RGFD +I V G+DH GY+ 
Sbjct: 291 EGAIWFKSTAFGDEKDRVLIRSNGAPTYFMSDVVYHKNKYDRGFDLVIDVWGADHHGYIP 350

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R+++  AA+      + VLL + V L R+G P+ MSKRAG F+TLR V+DEVG D+ RF 
Sbjct: 351 RMKSAVAAMGRDPEDLQVLLIQFVTLLRNGEPVSMSKRAGAFVTLRDVMDEVGVDATRFF 410

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNV 484
            + R+    LDFD    K  S +NPV+YVQYA+AR  SI R++     +    D    ++
Sbjct: 411 FVMRRCDSHLDFDLELAKRASSDNPVYYVQYAHARMCSIERESDARGLERPSMDDLDPSL 470

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +         EL+L   +A++P  I  A     P+++A+Y  +L+  FH  ++  R    
Sbjct: 471 LSL-----PEELRLATVIAKFPEEIRKAARDMAPHRIAYYAQELSEAFHSFYNVAR---- 521

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +      +   R+ L+ A    + + L I+GV +P  M
Sbjct: 522 ---IIGEEEPVRRNRMLLMEAARIALRNALGILGVSAPERM 559


>gi|296134410|ref|YP_003641657.1| arginyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032988|gb|ADG83756.1| arginyl-tRNA synthetase [Thermincola potens JR]
          Length = 561

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 198/584 (33%), Positives = 325/584 (55%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L  +    +K  + +      +  + +   V+E PR+  HG  +TN AM+L+R   + P 
Sbjct: 8   LKDNLIEVIKIAVIKAKEAGDISFEEIPDFVLEVPRERGHGDFATNIAMLLTRQARMAPR 67

Query: 63  TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE IV ++ K D  + ++ +AG GFIN YLS  +L  +L  I   G +YG + +G G 
Sbjct: 68  QIAEAIVKQLDKSDLPIVNIEVAGPGFINFYLSAEWLYDVLPEIEDQGAKYGYSSVGNGL 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTG +H+G+ R A +GD++ASL+A +G++V RE+YINDAG QI     S+
Sbjct: 128 KVQVEFVSANPTGLLHMGNARGAALGDSMASLLAAAGFDVQREFYINDAGNQIENFGKSL 187

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY Q L   D   PE  Y G  +    + + D+  ++ L+        ++   ++   
Sbjct: 188 EARYFQLL-GRDVAFPEDGYHGQDIIDTVQGIIDREGNKYLSLDSRLRRELLVKEALNEK 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  IR  L    +++D++ SE   H  D   +  +++ L  +GY+YE             
Sbjct: 247 LDGIRKSLADFGVKYDVWFSEQTLH--DSGAVEQVLNELREKGYIYEH------------ 292

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L F++T  GD+ D  +++S+G+ TYFAAD+AY K K++RGF  +I + G+DH 
Sbjct: 293 ----EGALWFKATEFGDEKDEVVVRSNGTPTYFAADIAYHKNKFDRGFQWVINIWGADHH 348

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G+V RL+    A+     ++ V++ +LVRL+R G  ++MSKR+G+F+TL  +V+EVG D+
Sbjct: 349 GHVNRLKGAMQALGYDPDKLQVVIMQLVRLFRGGEIVRMSKRSGEFVTLDDLVEEVGKDA 408

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+  + R     LDFD    K +S +NPV+Y+QYA+AR  SIFRQ ++    +      
Sbjct: 409 ARYFFVMRSPDSHLDFDMDLAKSKSNDNPVYYIQYAHARICSIFRQVQESGISVP----S 464

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I        +EL+L+  LA++P  +  A +  EP+++A YL++LA +FH  ++  R 
Sbjct: 465 ARNINPAVLKQAAELELLRKLADFPTEVAEAAVNLEPHRMARYLHELAGIFHSFYNSNR- 523

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V   ++ +   RL LV +V  ++ +GL ++G+ +P  M
Sbjct: 524 ------VMIEDKDIRDARLVLVKSVQQVLKTGLALLGLTAPERM 561


>gi|302392974|ref|YP_003828794.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302205051|gb|ADL13729.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 561

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 215/584 (36%), Positives = 329/584 (56%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +  D    +K+ ++  +D +I       D +++E PR+  HG  +TN AM+L+   G+ P
Sbjct: 8   IRDDLIIEIKDAIRRAVDEEILNLDNPPDDVMLEVPREEGHGDYATNIAMVLAGQAGMAP 67

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA++IV  +     V  V IAG GFIN YL   +L +I+ +++    +YG++  G G 
Sbjct: 68  RDIAQVIVDNLAELELVSKVEIAGPGFINFYLVDEWLYQIIETVLNEKEDYGKSNFGNGK 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV IEFVSANPTGP+HVGH R AV GD L ++M+ +G++V +EYYINDAG Q+  L  SV
Sbjct: 128 KVQIEFVSANPTGPLHVGHGRGAVAGDVLGNIMSAAGFDVAKEYYINDAGNQMELLGKSV 187

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RYQ+ L   D  +PE  Y G Y++ +  ++  +Y  + L   ++      ++++ + +
Sbjct: 188 ALRYQELL-GADITMPENSYQGDYIEKIAAKIETEYGDKYLTDVQDGNYEFFREFAYEQL 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I+ DL+A  I+ D + SE   H+ D   I +++  L   GY+YE             
Sbjct: 247 LANIKADLQAFGIEFDNWFSERKLHQED--KIGEVVAQLKEDGYLYE------------- 291

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              +   L  +ST  GDD DR ++K +G  TY AAD+AY   KY+RGF+ +I V G+DH 
Sbjct: 292 ---EEGALWLKSTDFGDDKDRVVIKDNGVPTYLAADIAYHDNKYQRGFEEVINVWGADHH 348

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+ R++A   A+      + V++ ++V L RDG  + MSKRAGDFITLR VVDEVG D+
Sbjct: 349 GYIARMKAAVEALGYSPEMLKVIIVQMVTLLRDGKQVSMSKRAGDFITLRDVVDEVGCDA 408

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+  + R     LDFD    KE+S ENPV+Y+QYA+AR  SI     D     +  +  
Sbjct: 409 ARYFYVMRSTDSHLDFDLDLAKEESAENPVYYIQYAHARICSIL----DQIKKEEIKIED 464

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + +  E      EL LI  L +YP  +  +  ++EP+ +A Y Y+LA+ FH  ++    
Sbjct: 465 VSGVDLERLDTEVELDLIQKLGDYPEELAESAKSREPHHMARYAYELAAQFHSFYNKCH- 523

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V   + ++   RLQLV AV  ++++ LNI+GV +P  M
Sbjct: 524 ------VLIQDEEVMQARLQLVLAVKQVLSNLLNILGVSAPESM 561


>gi|323702604|ref|ZP_08114266.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532423|gb|EGB22300.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 561

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 207/584 (35%), Positives = 319/584 (54%), Gaps = 31/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A  ++ L+  + +   +  +       IVIE PR+  HG  +TN AM L+R   + P 
Sbjct: 8   IRATLAAALEKAIAKAVDEGAINPVETPEIVIEVPREKEHGDFATNLAMQLARSAKMAPR 67

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE +V  + +       V IAG GFIN YL PS++  ++  IV     YGR  +G G 
Sbjct: 68  KIAEAVVENLDLAGTRVARVEIAGPGFINFYLEPSWVYDVVPLIVQEDRNYGRVELGNGR 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTG +H+G+ R A +GD+LA+++ F+GY V+REYYINDAG QI     S+
Sbjct: 128 KVQVEFVSANPTGLLHMGNARGAALGDSLAAILDFAGYRVSREYYINDAGNQIENFGRSL 187

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY Q L   D  +PE  Y G  +    K   +K+   L+N         +  Y+++  
Sbjct: 188 EVRYLQQL-GQDIPMPEEGYHGEDIIDTVKGYLNKHGDGLVNVDSATRRQTLAAYALKEK 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  IR+ L    + +D++ SE   H  D   I   I+ L  +GY+YE             
Sbjct: 247 LTHIRNTLLDFGVVYDVWFSEQSLH--DSGAIDRTINELRERGYIYEH------------ 292

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L F++T  GD+ D  +++S+G  TYFAAD+AY + K+ERGFD +I + G+DH 
Sbjct: 293 ----ENALWFKATEFGDEKDEVVVRSNGIPTYFAADIAYHRNKFERGFDWVIDIWGADHH 348

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G+V R++    A+   + ++ V+L +LVRL+R G  ++MSKR G F+TL  +++EVG D+
Sbjct: 349 GHVNRMKGSMEALGYSRDKLEVILMQLVRLFRGGEIVRMSKRTGQFVTLEELMEEVGRDA 408

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+  + R     LDFD    K Q+ +NPVFY+QYA+AR  SI RQ ++        L  
Sbjct: 409 ARYFFVMRSPDSHLDFDLDLAKSQTNDNPVFYIQYAHARICSILRQLQEQGRQ----LPA 464

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +      + +EL L+  LA++P  I  A     P+++A YL+DLA  FH  ++  R 
Sbjct: 465 AADVDLTLLKEEAELGLLRKLADFPTEIAAAAELLAPHRIARYLHDLAGQFHSFYNSYR- 523

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V  +N +L+  RL LV+ V  ++ + L ++G+ +P +M
Sbjct: 524 ------VITDNEELSQARLVLVNCVRIVLRNALGLLGLTAPEKM 561


>gi|83593114|ref|YP_426866.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|109895029|sp|Q2RTG6|SYR_RHORT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83576028|gb|ABC22579.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 592

 Score =  578 bits (1490), Expect = e-162,   Method: Composition-based stats.
 Identities = 260/594 (43%), Positives = 373/594 (62%), Gaps = 12/594 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F D    +   +  +  + ++ + +   R+ +E PR+ AHG ++TNAAM+L++P GL
Sbjct: 1   MNVFHDIKETVLAQVAALQAEGRLPEGLETGRVAVEPPREAAHGDMATNAAMVLAKPAGL 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE++V ++     + +   AG GFINL L P   RK L +++  G  +G + +G+
Sbjct: 61  APRAVAEMLVEKLVGVDGIVAAETAGPGFINLRLDPKIWRKTLKTVLTLGTAFGASTMGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  VN+EFVSANPTGPMHVGH R AV GD LA+L+  +G+ VTREYY+NDAGAQ+++LA 
Sbjct: 121 GAAVNVEFVSANPTGPMHVGHGRGAVFGDALAALLVKAGWAVTREYYVNDAGAQVDSLAR 180

Query: 180 SVFWRYQQALYNNDSDLP-------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           +++ RY+ A+ + D           E  Y G YL  V  ++A    +      E  WLP 
Sbjct: 181 ALYARYRVAVGDLDEAAFAAMLAAREIEYGGDYLVPVAADIAQADGTRWTTVAESDWLPA 240

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +   ++ M+ +I++DL AL + HD+F SE    R     + +++ +L  +  VY G L 
Sbjct: 241 FRAIGIERMLALIKEDLAALGVVHDVFTSEQALVR--AGRVDEMMTDLESRDLVYVGTLE 298

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
           PPK KT    +  R Q LFR+T  GD+VDRPL KSDGS+TYFA+D+AY   K++RGF  M
Sbjct: 299 PPKGKTPDDWE-PRPQTLFRATGFGDEVDRPLKKSDGSWTYFASDIAYHHDKFKRGFLGM 357

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I V+G+DH GYVKRL+A   AVS  +A+++V L +LV+L  +G P+KMSKRAG FITLR 
Sbjct: 358 INVLGADHGGYVKRLKAAVKAVSNGEAELDVKLVQLVKLLDNGEPVKMSKRAGTFITLRE 417

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           VVDEVG D VRF+ML RKN   LDFD+ +V E++++NPVFYVQYA+AR  S+ R A   F
Sbjct: 418 VVDEVGKDVVRFIMLTRKNDAALDFDYARVTEKTRDNPVFYVQYAHARACSVARHAAQTF 477

Query: 473 PD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           P               +      E+ ++  LA +PR++E+A  A EP+++AFYL ++A+ 
Sbjct: 478 PGRDLSAAALAATADLDLLDADEEMAMVRLLAGWPRLVESAAEAHEPHRVAFYLGEVAAA 537

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FHG W+ G +N  LRF+   +   ++ RL LV AVAS+I SGL I GVE   EM
Sbjct: 538 FHGLWNRGNDNAELRFLLPTDEARSLARLALVQAVASVIASGLEIFGVEPVKEM 591


>gi|77918356|ref|YP_356171.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|109895013|sp|Q3A6K6|SYR_PELCD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77544439|gb|ABA88001.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 554

 Score =  578 bits (1490), Expect = e-162,   Method: Composition-based stats.
 Identities = 219/584 (37%), Positives = 320/584 (54%), Gaps = 35/584 (5%)

Query: 7   FSSRLKNYLKEIDC----KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
              RL+ Y+ E       + ++    +  I +E P    HG  STN AM ++R     P 
Sbjct: 1   MKQRLRQYIGEALQACFDQQQLHSGTIPEINLEVPAHAEHGDFSTNVAMAMARAEKKAPR 60

Query: 63  TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE IVA + +       V IAG GFIN YL+P     +L  +V  G  +GR   G G 
Sbjct: 61  KIAETIVAALGEGGGMWSRVEIAGPGFINFYLTPRCWFGVLDEVVRRGDLFGRTHTGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+GH R A  GD +A+++  +GYEV REYYINDAG Q+ TL  S+
Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVAAVLGAAGYEVQREYYINDAGNQMLTLGRSL 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++ L     + P   Y GVY+  + +E+ +     L + PEE+ L    +Y    +
Sbjct: 181 LLRYRELL-GETIEFPTDCYQGVYVIDLAREVLESEGERLRDLPEEEALRFFANYGGDKI 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              I +DL A  ++ D + SE   +  D   +   I  L  +G  YE             
Sbjct: 240 RAGIDEDLAAFGVRFDNWYSEQSLY--DRQEVERGIALLKERGLTYE------------- 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  + FR+T  GDD DR L++S+G+ TYFA+D+AY K K+ERGFD +I V G+DH 
Sbjct: 285 ---KDGAIWFRTTDYGDDKDRVLIRSNGATTYFASDVAYHKEKFERGFDTVIDVWGADHH 341

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV R++AV A +      + ++L +LV L R G  + MS R+G+F+TLR V+DEVG D+
Sbjct: 342 GYVPRMKAVLAGLDRNPEDLQIILVQLVNLLRGGQQVAMSTRSGEFVTLREVIDEVGRDA 401

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF  L R++   LDFD    K+QS ENPV+YVQYA+AR  SI R A+D        +  
Sbjct: 402 CRFFFLMRRSDSQLDFDLDLAKKQSTENPVYYVQYAHARVCSINRNAEDQG----VAMPE 457

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +  +      EL L   L+ YP V++ A    EP+++ FYL +LA+ FH +++ GR 
Sbjct: 458 LGEVDFDCLTLEDELALTKLLSRYPEVVDGAAEHFEPHRVVFYLQELAARFHSYYNKGR- 516

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V  ++  ++  RL LV+ V +++++ L ++GV +P  M
Sbjct: 517 ------VLVDDPDVSRARLYLVNCVRTVLHNALVLLGVSAPERM 554


>gi|91206117|ref|YP_538472.1| arginyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157826450|ref|YP_001495514.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|109895031|sp|Q1RGY1|SYR_RICBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232833|sp|A8GUI1|SYR_RICB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91069661|gb|ABE05383.1| Arginyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157801754|gb|ABV78477.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 576

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 248/585 (42%), Positives = 361/585 (61%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK+ +     ++    +I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NKLKHDIITASTQLYNNSEIANHASIETPKDSFNGDLSSNIAMIIAAKKNVP 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +        +  I+ +  ++    + K 
Sbjct: 57  PREVALKFKEILNELPYIASIEIAGPGFINFTIKADSWHTAIKDILQNESKFFEIDVDKN 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA+++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 KNINIEYVSANPTGPMHIGHARGAVYGDVLANILKKVGYPVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      + EG YPG YL  VG+ LA +Y  +LLN  E +   IVK++++Q 
Sbjct: 177 VILRYREAL-GEKITITEGLYPGEYLIPVGQALAKEYGDKLLNMDELERFKIVKNFAIQK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + ++DLK L ++HD+F SE   H  D   I   +  L   G +YEG +P PK K   
Sbjct: 236 MLDLNKEDLKELGVKHDVFFSEQTLH--DNGKIEKTVKLLTDMGLIYEGSVPAPKGKVHA 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + + +R Q LF+ST  GDD DRP+ K+DGS+TYFA+DLAY K K +RG +++IYV+G+DH
Sbjct: 294 EWE-NRTQELFKSTKYGDDQDRPIRKADGSWTYFASDLAYAKDKIDRGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA   A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEATVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGTFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N++ LDFD  KVKEQSKENP+FYVQYA+ R  SI  +A +  P   ++ F
Sbjct: 413 IIRFMMLTRENNKTLDFDLIKVKEQSKENPIFYVQYAHVRTLSILSKAMETIPQ-SYNSF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E A    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 EAGTYDLSLLSSEEEIEIIKLLASWTKTLETAAKYFEPHRVAFYLINLASKFHALWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RF+  NN +LT  RL L  A+  II SGL +IGVE    M
Sbjct: 532 ENNDYRFIIENNVELTTARLALAKAIQKIIASGLEVIGVEPMTRM 576


>gi|228994078|ref|ZP_04153978.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|229000147|ref|ZP_04159716.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229007668|ref|ZP_04165260.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753536|gb|EEM02982.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228759479|gb|EEM08456.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228765530|gb|EEM14184.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 556

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 202/587 (34%), Positives = 323/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  +K    K ++  ++ +  +V+E P+D  HG  STN AM L+R    
Sbjct: 1   MNSLEQVKELIKEEIKAAVLKAELATEEQIPNVVLESPKDKTHGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE ++A   K    ++ + IAG GFIN Y+  SYL  ++  IV +G  YG    G
Sbjct: 61  APRMIAEELIANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPVIVTAGTNYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +G+ LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGQRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLTAGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E+ L+  L E+P  +  A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 INYKLVAS------EKEVDLLKKLGEFPAAVAEAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R  L+ AV   + + L ++GV +P +M
Sbjct: 516 E------KVLNPDNLELSKARYDLMRAVRITLQNALALVGVSAPEKM 556


>gi|89093512|ref|ZP_01166460.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082202|gb|EAR61426.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 561

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 195/586 (33%), Positives = 307/586 (52%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  +++ LK +     +   +  +I++E  RD +HG  ++N AM L++    +P  +AE
Sbjct: 5   IAELIESALKNLIENGTLPADVQPKIMVENTRDKSHGDYASNIAMTLAKAAKSNPRQLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  +    ++    IAG GFIN ++S +    ++ +I+     YGRN  G G KV +E
Sbjct: 65  KLVEALPESDNLKRTEIAGPGFINFFISGASTGNLVKTILTEKEAYGRNNDGAGRKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R A VGD L  LM  +G++VTRE+Y NDAG QIN LA SV  R  
Sbjct: 125 FVSANPTGPLHIGHGRGAAVGDCLCRLMDANGWDVTREFYYNDAGQQINNLAFSVQARC- 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L   D   P   Y G Y+  + +     +             + + L  ++ ++V  +
Sbjct: 184 KGLTPEDPSWPADGYRGDYIVELAESFMRGDTVKSEDQSFTGTKDAEDLEAIRHFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DL+A  +  D+F  E   +      +   +  L   GY YE             
Sbjct: 244 RHEQDLDLQAFGVDFDVFFLESSLYT--EGKVEAAVQKLIENGYTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              D   L  R+T  GDD DR + K DG YTYF  D+AY   K++RGFD +I   G+DH 
Sbjct: 289 ---DDGALWLRTTDFGDDKDRVMRKKDGGYTYFVPDVAYHLNKWQRGFDTVINEQGADHH 345

Query: 362 GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A   A+     K   + +L ++V + + G  +K+SKRAG ++TLR +++EVG 
Sbjct: 346 STITRVRAGLQALKADIPKGWPDYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLIEEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  RK+   L FD    + +S +NPV+Y+QYA+AR  SIFR+ K+     D   
Sbjct: 406 DATRYFLAARKSDSHLTFDIDLARSESADNPVYYIQYAHARVCSIFRKLKENNLSWDEAT 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +   E E   SE  L+++L  YP V++NA  A+EP+++A YL DLA+ FH +++  
Sbjct: 466 GIEALDSLELE---SEKNLVINLGRYPEVVKNAANAREPHQIANYLKDLAAEFHTYYNSE 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           +  L   RL L  AV  ++ +GL+++GV +P +M
Sbjct: 523 KT-------LVEDADLRNARLTLAVAVRHVLANGLDLLGVSAPEQM 561


>gi|228955613|ref|ZP_04117611.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072831|ref|ZP_04206030.1| Arginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229082576|ref|ZP_04215039.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701008|gb|EEL53531.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710322|gb|EEL62297.1| Arginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228803982|gb|EEM50603.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 556

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 207/587 (35%), Positives = 331/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++   +D D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAVDGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|118480395|ref|YP_897546.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118419620|gb|ABK88039.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 556

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 330/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVKARYMQAL-GLEKEMPEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++    D D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATDGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNVELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228924110|ref|ZP_04087386.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835600|gb|EEM80965.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 556

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 207/587 (35%), Positives = 330/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++    D D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|310639600|ref|YP_003944358.1| arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
 gi|309244550|gb|ADO54117.1| Arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
          Length = 559

 Score =  576 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 196/581 (33%), Positives = 309/581 (53%), Gaps = 32/581 (5%)

Query: 7   FSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            + ++ + ++  +     V ++ L  I +E P+D +HG L+TN AM L+R    +P  IA
Sbjct: 9   INQKVTSAIEAAVLAAGIVSREELPTITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIA 68

Query: 66  ELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E ++A +      ++S  IAG GFIN  L+ SYL  ++  +   G +YGR  +G G KV 
Sbjct: 69  EDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQGADYGRVQVGAGKKVQ 128

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IEFVSANPTG +H+GH R A VGD L +++ F+GY+VTREYYINDAG QI  ++ S+  R
Sbjct: 129 IEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYQVTREYYINDAGNQIYNMSRSIEAR 188

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y Q L    +++PE  Y G  +    KEL  +    LL+          ++Y ++  +  
Sbjct: 189 YLQEL-GQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDRAAYFREYGLEKELNK 247

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+ DL+   +  D + SE   +  D   +   ++ L  +  +Y+                
Sbjct: 248 IKRDLERFRVPFDSWFSETSLY--DNGEVLKALNELRDREEIYD---------------- 289

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                   +T  GDD DR L+K+DG+YTY   D+AY + KY RG+D +I + G+DH GY+
Sbjct: 290 KDGATWLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGYDTIINIWGADHHGYI 349

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T+  +++EVG D++R+
Sbjct: 350 PRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMEEVGVDAIRY 409

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
               R     LDFD       S ENPVFYVQYA+AR  S++RQA++        + P   
Sbjct: 410 FFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAEEQG----IAVLPLAE 465

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +         E  L+  + E P  +  A     P+++  Y+Y+LAS+FH ++   R    
Sbjct: 466 VDLSKLTAEHEYDLLRKIGELPEEVSVAAANFAPHRMIRYVYELASMFHSYYKAER---- 521

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   +   T  RL L  AV + I + L ++GV +P  M
Sbjct: 522 ---VITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM 559


>gi|254482629|ref|ZP_05095867.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214036988|gb|EEB77657.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 561

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 187/590 (31%), Positives = 302/590 (51%), Gaps = 36/590 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  + +  ++  L  +  +  +      ++ I+R RD +HG L++N A+ L++    +P 
Sbjct: 1   MKQEITQLIEQALDALVIQDHLPADTQAKVQIDRTRDKSHGDLASNIALTLAKAAKKNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A LI A +     V    IAG GFIN +L+ S  + ++ +I+  G  +G + +G G +
Sbjct: 61  ELAGLICAALPESDLVAKTEIAGPGFINFFLTDSSSQSVVRTILERGAAFGHSNVGAGRR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A VGD+L  LM  +G+ V  E+Y NDAGAQI+ LA SV 
Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAVGDSLCRLMMATGWNVASEFYYNDAGAQIDNLARSVQ 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYS 237
            R    +     D PE  Y G Y+  V          D     +    +   +  ++ ++
Sbjct: 181 ARC-NGMDPQSPDWPEDGYRGGYISDVANAYLAGDTIDAQDQHVTGAADVDDVEAIRQFA 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  +  D++  E   +  +   +   +  L  QG+ YE         
Sbjct: 240 VAYLRREQDLDLKAFAVHFDLYFLESSLY--NSGAVEQTVQRLIEQGHTYE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KS+G YTYF  D+AY   K++RGF+ +I   G
Sbjct: 289 -------QDGALWLRTTDFGDDKDRVMRKSEGGYTYFLPDVAYHLNKWQRGFERVINEQG 341

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +DH   V R+ A   A+     +   + +L ++V + RDG  +K+SKRAG ++TLR ++D
Sbjct: 342 ADHHSTVTRVRAGLQALQQDIPQGWPDYVLHQMVTVMRDGEEVKISKRAGSYVTLRDLID 401

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ R+ ++ R  S  L FD      QS +NPV+Y+QYA+AR  SI R+ ++     
Sbjct: 402 EVGRDATRYFLVARGPSSQLTFDIDLALSQSNDNPVYYIQYAHARVCSIMRKLEEQGDTW 461

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             +     +       +  E  L+  L ++P V+ +A    EP+ +A YL +LA  FH  
Sbjct: 462 SIE---AGLESLGQLTEDHEKALMRRLDQFPEVVSHAAENSEPHNVANYLRELAGDFHSW 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +          +++ +   RL L  AV  +IN+GL+++GV +P  M
Sbjct: 519 YNAHKT-------LVDDKSVRDARLALSEAVRQVINNGLDLLGVSAPESM 561


>gi|229087850|ref|ZP_04219963.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695457|gb|EEL48329.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 556

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 204/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K+ ++    K ++   + +  +V+E P+D  HG  STN AM L+R    
Sbjct: 1   MNSLEQVKELIKDEIQAAVLKAELATAEQIPNVVLESPKDKTHGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE ++A   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELIANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPAIVKAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +G+ LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGQRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R +   LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSSDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLTAGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLVAS------EKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R  L+ AV   + + L ++GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYDLMRAVRITLQNALALVGVSAPEKM 556


>gi|257062918|ref|YP_003142590.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256790571|gb|ACV21241.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 583

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 196/599 (32%), Positives = 311/599 (51%), Gaps = 37/599 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D    +   L        +  +    + +ERPRD  HG  +   A+  ++    +
Sbjct: 1   MQPREDLGRLISAALDLAIASGALALETTPEVTLERPRDEGHGDWACTVALRCAKQAKKN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ IV  +     V+ V IAG GFIN YL    L+ ++  +     +YG+  I +G
Sbjct: 61  PREVAQTIVDYMPEPDFVEKVEIAGPGFINFYLKHDALQNVVVKVREQKGDYGKGTIPEG 120

Query: 121 TKVN-IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            +   IE++S+NPTGPMHVGH R A +G  +A++M  +GY+V  E+YIND G Q++   +
Sbjct: 121 MRRVQIEYISSNPTGPMHVGHGRWAALGSAMANVMRHAGYDVFEEFYINDHGVQMDKFGV 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY Q L   D+ +PEG Y G+Y+  + K + D+   + +N  E + +   +++   
Sbjct: 181 SIVARYLQQLGQADAAVPEGGYNGLYVNDIAKAIIDRDGDKWVNADEHERMVEFREFGYA 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-------RGDPSPIRDIIDNLARQGYVYEGILP 292
            +M  IR   +      + + SE + +           SP+  I+D L  QG +Y+    
Sbjct: 241 YIMDNIRSTCERFGNHFERWQSERELYAPSDDFWFDGRSPVEAILDKLREQGDIYD---- 296

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                       +   + FRS+  GD+ DR L KSDG+YTYFA+D+AY   K  RGFD++
Sbjct: 297 ------------EDGAVWFRSSAYGDEKDRVLQKSDGAYTYFASDVAYHYLKKMRGFDHL 344

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I + G+DH GY+ R+ AV AA       + V+L +LV L+RDG P++MSKR G+ IT   
Sbjct: 345 IDIWGADHHGYIARVAAVLAAEGF-PGALEVVLGQLVNLFRDGKPVRMSKRTGEMITFEE 403

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++DEVG D+ R+ ML R + + +DFD    K     NPV+Y QYA+AR  S+ R A    
Sbjct: 404 LIDEVGIDATRYWMLDRSSDQPIDFDIEVAKRADDSNPVYYDQYAHARICSLLRNASGHA 463

Query: 473 PD--LDFDLFPRNVIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            +  LD D      IP + +        EL L+  ++E+  +I  A   + P++L  Y Y
Sbjct: 464 GEDNLDMDAVATECIPADVDLSVLSAPEELALMRKMSEFGDMIALAARDRAPFRLTHYAY 523

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LAS+FH  +++         ++A +  L   RL L  A   ++   LN++G+ +P  M
Sbjct: 524 ELASLFHSFYANC------PVLKAEDEGLKQARLALADATRIVMAITLNLLGISAPQRM 576


>gi|206970067|ref|ZP_03231020.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229181611|ref|ZP_04308936.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206734644|gb|EDZ51813.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228601807|gb|EEK59303.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 556

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNVELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|78357338|ref|YP_388787.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109894988|sp|Q30Z04|SYR_DESDG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78219743|gb|ABB39092.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 551

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 206/579 (35%), Positives = 326/579 (56%), Gaps = 32/579 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            + L+  LK +   +++     D++ IE P+D   G L+ N A++L++P  + P  +A  
Sbjct: 4   KNHLQTALKAVVADLELP--WPDKVSIEPPKDKKFGDLAANIALVLAKPAAMPPRELAAR 61

Query: 68  IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  R++   P++  V IAG GFIN+  +P +  + +  +  +G  +G   +G G KV IE
Sbjct: 62  ITERLQQKYPEISGVEIAGPGFINVTYAPDFWHRTVHMVEQAGGRFGSVNVGNGRKVQIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +GD+LA +M F+G+E + EYYINDAG Q+  L  SV++R +
Sbjct: 122 YVSANPTGPLHIGHGRGAAIGDSLARMMRFAGFETSTEYYINDAGRQMLLLGASVYYRAK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q +   D   PE YY G Y++ +  E+   ++ +LL  PEE+ L + + Y+V  +M  IR
Sbjct: 182 Q-IKGLDVAEPEEYYRGDYIRDIASEVL-GFTPDLLEKPEEEALAVCQKYAVDTIMAGIR 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL   ++ HD++ SE      +   +    D L R G  YE                + 
Sbjct: 240 QDLADFSVSHDVWFSEKSLV--ETGAVDKTFDRLRRSGLAYE----------------ED 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FR+T  GDD +R L KS+G  TYFA+D+AY   KY+RGFD  + + G+DH GYV R
Sbjct: 282 GALWFRTTDFGDDKNRVLKKSNGYLTYFASDIAYHDNKYDRGFDLCVDIWGADHHGYVPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   A+ +     +V+L +LV L R+G  + MS RAG+F TL  VV EVG+D+ RFM 
Sbjct: 342 MRAAVQALGKPADSFDVILVQLVNLLRNGEQVAMSTRAGEFETLADVVKEVGADAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK++S +NPV+YVQYA+AR  S+ R+A +     +       + P
Sbjct: 402 LSRKSDSSLDFDLELVKQRSMDNPVYYVQYAHARICSVLRKAAERGTTPETHSDEELLKP 461

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E+ ++  +  +   +E A  +   + +++YL +LAS  H  +++        
Sbjct: 462 ---LVHADEIDMLRLVDRFEDTVEAAATSLSVHHISYYLQELASALHRFYANH------P 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A + ++   RL L+ AVA ++ +GL+++GV +P  M
Sbjct: 513 VLNAPDEQILKARLALLRAVAQVLRNGLDLLGVSAPEAM 551


>gi|39996911|ref|NP_952862.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39983799|gb|AAR35189.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 568

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 200/587 (34%), Positives = 305/587 (51%), Gaps = 38/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L+       +    +  IV+E+P    HG  +  AAM++++     P  IAE
Sbjct: 12  VRDLVREALERSFADGTLASGHVPDIVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAE 71

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +I+  +   +  V+SV IAG GFIN  +  S   ++L  I   G +YG++  G G KV +
Sbjct: 72  IIITHLNDRESLVESVEIAGPGFINFRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQV 131

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L+A  G++VTRE+Y NDAG QI  LALSV  R 
Sbjct: 132 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 191

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +       P   Y G Y+K V      +E  D     +    +   +  ++ ++V  
Sbjct: 192 L-GVEPGGPLWPTDGYQGEYIKDVARSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAY 250

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DL+A ++  D++  E   +      + D++  +  +G+ YE            
Sbjct: 251 LRREQDQDLRAFDVGFDVYFLESSLYA--EGRVDDVVQRIIAKGHAYE------------ 296

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ERGF  ++   G+DH
Sbjct: 297 ----QDGALWLRTTEFGDDKDRVMRKSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADH 352

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+     K     +L ++V + R G  +K+SKRAG ++TLR +VDEVG
Sbjct: 353 HSTITRVRAGLQALDAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVG 412

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  L RK    L FD    K+Q+ ENPV+YVQYA+AR  SIF  A D        
Sbjct: 413 RDATRFFFLMRKPDSQLVFDIDLAKQQTLENPVYYVQYAHARICSIFENAADKGVVPP-- 470

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +    ES     EL L+  L+ +P ++E + +  EP+++ +YL +LA  FH  ++ 
Sbjct: 471 --TVDQASLESLGTPEELTLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNK 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   +  LT  RL L+H+ A++I +GL ++GV +P +M
Sbjct: 529 NR-------VITEDADLTGARLLLLHSTATVIRNGLGLLGVSAPEKM 568


>gi|298505924|gb|ADI84647.1| arginyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 568

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 201/587 (34%), Positives = 305/587 (51%), Gaps = 38/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L+       +    +  IV+E+P    HG  +  AAM++++     P  IAE
Sbjct: 12  VRDLVREALERSFADGTLASGHVPDIVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAE 71

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +I+  +   +  V+SV IAG GFIN  +  S   ++L  I   G +YG +  G G KV +
Sbjct: 72  IIITHLNDRESLVESVEIAGPGFINFRMRTSAWCRVLRRIEREGGDYGESEAGAGKKVQV 131

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L+A  G++VTRE+Y NDAG QI  LALSV  R 
Sbjct: 132 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 191

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +   D   P   Y G Y+K V      +E  D     +    +   +  ++ ++V  
Sbjct: 192 L-GVEPGDPLWPTDGYQGEYIKDVARSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAY 250

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DL+A ++  D++  E   +      + D++  +  +G+ YE            
Sbjct: 251 LRREQDQDLRAFDVGFDVYFLESSLYA--EGRVDDVVQRIIAKGHAYE------------ 296

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ERGF  ++   G+DH
Sbjct: 297 ----QDGALWLRTTEFGDDKDRVMRKSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADH 352

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+     K     +L ++V + R G  +K+SKRAG ++TLR +VDEVG
Sbjct: 353 HSTITRVRAGLQALDAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVG 412

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  L RK    L FD    K+Q+ ENPV+YVQYA+AR  SIF  A D        
Sbjct: 413 RDATRFFFLMRKPDSQLVFDIDLAKQQTLENPVYYVQYAHARICSIFENAADKGVVPP-- 470

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +    ES     EL L+  L+ +P ++E + +  EP+++ +YL +LA  FH  ++ 
Sbjct: 471 --TVDQASLESLGTPEELTLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNK 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   +  LT  RL L+H+ A++I +GL ++GV +P +M
Sbjct: 529 NR-------VITEDADLTGARLLLLHSTATVIRNGLGLLGVSAPEKM 568


>gi|258513416|ref|YP_003189638.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777121|gb|ACV61015.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 570

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 201/590 (34%), Positives = 329/590 (55%), Gaps = 40/590 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    L+   K+I+         L   V+E PR+  HG  ++N AM+L++P  + P  IA
Sbjct: 11  NLKRILECAFKDINNNGIFHADKLPEFVVEVPREKGHGDFASNLAMMLAKPARMAPRRIA 70

Query: 66  ELIVARIKIDPDVDS----------VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           E+ V  +  +   D           V +AG GFIN YL+P+++ + L  I   G +YGR 
Sbjct: 71  EIFVEHLNEEIKSDKQDGSFILLDRVEVAGPGFINFYLNPAWVYETLRIIETEGNDYGRV 130

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           ++G G KV +EFVSANPTG +H+G+ R A +GD LASL+ F+GY+VTRE+Y+NDAG QI 
Sbjct: 131 MLGSGKKVQVEFVSANPTGLLHMGNARGAALGDCLASLLDFAGYQVTREFYVNDAGNQIE 190

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              L++  RY Q L   D  +PE  Y G+ +    +   DKY ++ L+ P +    ++ +
Sbjct: 191 NFGLTLEARYLQLL-GQDCPVPEDGYHGLDIIQTMQGFVDKYGNKFLSAPGKVRRMVMIN 249

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y+++  ++ IR+ L    +++D++ SE D H  +   + + +  L  +G++YE       
Sbjct: 250 YALEEKLREIRNTLFDFGVRYDVWFSEKDLH--ESGAVNEAVAILKEKGHIYE------- 300

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L F++T  G + D  +++S+G  TYFAAD+AY K K++RGFD +I +
Sbjct: 301 ---------KEGALWFKATEFGVEKDEVVVRSNGVPTYFAADIAYHKNKFDRGFDRVINI 351

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V R++    A+      ++++L +LVRL+R    ++MSKR G F+TL  +++
Sbjct: 352 WGADHHGHVSRVKGAVEAIGYDPESLDIILMQLVRLFRGTEIVRMSKRTGQFVTLDELIE 411

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D  R+  + R     LDFD    K QS ENPV+Y+QYA+AR  SI RQ  +     
Sbjct: 412 EVGRDVARYFFVMRSADSHLDFDLELAKSQSNENPVYYIQYAHARICSILRQLDEQGGR- 470

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              L     +      +  EL LI  +A++P  I +A  +  P++LA Y+++LA + H  
Sbjct: 471 ---LPQAGAVDLALLKEEIELDLIRKMADFPEEIASAAESLAPHRLARYVHELAGLLHSF 527

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V  ++  L+  RL LV +V ++I + L+++G+ +P +M
Sbjct: 528 YNSHR-------VIVDDAALSEARLVLVMSVKTVIKNALSLLGIAAPEKM 570


>gi|229193615|ref|ZP_04320559.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228589920|gb|EEK47795.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 556

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|329769586|ref|ZP_08260991.1| arginyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838538|gb|EGF88145.1| arginyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 544

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 218/581 (37%), Positives = 338/581 (58%), Gaps = 39/581 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++   L+    K+++       I +E P++  +G  S+N AM L+R L  +P  IAE
Sbjct: 1   MKNKIIELLQSSLAKLEISGV---DIYVETPKNNDNGDFSSNIAMQLTRVLKKNPRVIAE 57

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I++ I  D  ++ + IAG GFIN Y+  S L  ++  ++    +YG N +G+G KV +E
Sbjct: 58  EIISNIPEDETIEKIEIAGPGFINFYVKKSSLGSVIEKVLTDNEKYGENNVGQGKKVLLE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A   D+LA +M  SGY+++REYYINDAG QIN L +S   RY+
Sbjct: 118 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDLSREYYINDAGNQINNLVISAIVRYK 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QAL   +++LPE  Y G  +K +G++L D++   LL    E     ++DY+V   M+ I+
Sbjct: 178 QAL-GLEAELPEDAYHGEDIKVLGQKLKDEFGDSLLE--REDLESFIRDYAVAYEMENIK 234

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    +++D++ SE   +  +   +   +++L  QGYVYE                  
Sbjct: 235 KDLGDFGLEYDVYFSEKSLY--ENGLVDKALESLREQGYVYE----------------KD 276

Query: 307 KQLLFRSTMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
             L  ++T +  GDD DR L+K+DGS TY  +D+AY K K +RGFD ++ V+G+DH GYV
Sbjct: 277 GALWLKTTALGTGDDKDRVLIKADGSLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYV 336

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A+  K  Q+  L+ ++V+L  +G  +KMSKR G  ITLR ++DEVG+D+ R+
Sbjct: 337 ARLKASIVAMGYKAEQLEALIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 396

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++ R     LDFDF   KEQS +NP++YVQYA+AR  SI RQA +     DF++   N 
Sbjct: 397 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQASEQG---DFNIENCN- 452

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              E   D   ++L+ +LA +P ++  A    EP+++  YL +LAS FH  +++ +    
Sbjct: 453 --YELLTDEYSVELLKNLAYFPEIVAQAATNYEPHRICNYLQNLASSFHKFYNNNK---- 506

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   N++ T   L L+ AV   + + L +IGV +P +M
Sbjct: 507 ---VITENKEQTESYLALITAVKITLRNALELIGVSAPEKM 544


>gi|218233285|ref|YP_002370139.1| arginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218161242|gb|ACK61234.1| arginine--tRNA ligase [Bacillus cereus B4264]
          Length = 556

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|42784538|ref|NP_981785.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408378|sp|Q72X85|SYR_BACC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42740470|gb|AAS44393.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 556

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETSTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228961626|ref|ZP_04123235.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051033|ref|ZP_04194581.1| Arginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229112776|ref|ZP_04242308.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229153525|ref|ZP_04281703.1| Arginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630129|gb|EEK86780.1| Arginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228670610|gb|EEL25922.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228722342|gb|EEL73739.1| Arginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798108|gb|EEM45112.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 556

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229164310|ref|ZP_04292241.1| Arginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619153|gb|EEK76048.1| Arginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 556

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKIV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|30265386|ref|NP_847763.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530933|ref|YP_022282.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49188199|ref|YP_031452.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317342|ref|ZP_00390301.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871340|ref|ZP_02215989.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635784|ref|ZP_02394094.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167640392|ref|ZP_02398656.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688209|ref|ZP_02879420.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708079|ref|ZP_02898527.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177651880|ref|ZP_02934463.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569103|ref|ZP_03022002.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227818129|ref|YP_002818138.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601148|ref|YP_002869577.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687194|ref|ZP_05151052.1| arginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254735489|ref|ZP_05193197.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254742250|ref|ZP_05199937.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254755835|ref|ZP_05207867.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761549|ref|ZP_05213569.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|254762174|ref|ZP_05214020.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38372560|sp|Q81JT7|SYR1_BACAN RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|30260064|gb|AAP29249.1| arginine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47506081|gb|AAT34757.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49182126|gb|AAT57502.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164713007|gb|EDR18535.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511612|gb|EDR86994.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528893|gb|EDR91650.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127052|gb|EDS95931.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667902|gb|EDT18654.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082584|gb|EDT67648.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559771|gb|EDV13757.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227006270|gb|ACP16013.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229265556|gb|ACQ47193.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 556

 Score =  574 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K     + + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASTEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229099792|ref|ZP_04230716.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105951|ref|ZP_04236573.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228677435|gb|EEL31690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228683538|gb|EEL37492.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 556

 Score =  574 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|109894995|sp|Q74C63|SYR_GEOSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 561

 Score =  574 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 200/587 (34%), Positives = 305/587 (51%), Gaps = 38/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L+       +    +  IV+E+P    HG  +  AAM++++     P  IAE
Sbjct: 5   VRDLVREALERSFADGTLASGHVPDIVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAE 64

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +I+  +   +  V+SV IAG GFIN  +  S   ++L  I   G +YG++  G G KV +
Sbjct: 65  IIITHLNDRESLVESVEIAGPGFINFRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L+A  G++VTRE+Y NDAG QI  LALSV  R 
Sbjct: 125 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +       P   Y G Y+K V      +E  D     +    +   +  ++ ++V  
Sbjct: 185 L-GVEPGGPLWPTDGYQGEYIKDVARSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAY 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DL+A ++  D++  E   +      + D++  +  +G+ YE            
Sbjct: 244 LRREQDQDLRAFDVGFDVYFLESSLYA--EGRVDDVVQRIIAKGHAYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ERGF  ++   G+DH
Sbjct: 290 ----QDGALWLRTTEFGDDKDRVMRKSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+     K     +L ++V + R G  +K+SKRAG ++TLR +VDEVG
Sbjct: 346 HSTITRVRAGLQALDAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  L RK    L FD    K+Q+ ENPV+YVQYA+AR  SIF  A D        
Sbjct: 406 RDATRFFFLMRKPDSQLVFDIDLAKQQTLENPVYYVQYAHARICSIFENAADKGVVPP-- 463

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +    ES     EL L+  L+ +P ++E + +  EP+++ +YL +LA  FH  ++ 
Sbjct: 464 --TVDQASLESLGTPEELTLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNK 521

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   +  LT  RL L+H+ A++I +GL ++GV +P +M
Sbjct: 522 NR-------VITEDADLTGARLLLLHSTATVIRNGLGLLGVSAPEKM 561


>gi|206975865|ref|ZP_03236776.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962853|ref|YP_002341431.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098835|ref|YP_002532893.1| arginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229142106|ref|ZP_04270631.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229199487|ref|ZP_04326148.1| Arginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206745959|gb|EDZ57355.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064150|gb|ACJ78400.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242894|gb|ACM15604.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|228583892|gb|EEK42049.1| Arginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228641395|gb|EEK97701.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324329312|gb|ADY24572.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 556

 Score =  574 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|254516119|ref|ZP_05128179.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675841|gb|EED32207.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 560

 Score =  574 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 194/586 (33%), Positives = 306/586 (52%), Gaps = 37/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            ++ L   L+ I      E      I +ER RD AHG L++N A+  ++ L + P  +A+
Sbjct: 5   VAALLGEALQTIISAQGAEIS-APAIQVERTRDAAHGDLASNIALAAAKLLKMPPRELAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +  +D   IAG GFIN +LS      ++  ++  G ++G N  G G KV +E
Sbjct: 64  AICDALPENTAIDRTEIAGPGFINFFLSNDSQAAVVQDVLRQGAKFGHNNSGTGRKVQVE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGDTLA ++   G+EV RE+Y NDAGAQIN L LSV  R  
Sbjct: 124 FVSANPTGPLHVGHGRGAAVGDTLARILDACGWEVVREFYYNDAGAQINNLGLSVQARC- 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L  +D   P+  Y G Y+  + +     E  +     +    +   L  +++++V  +
Sbjct: 183 KGLTPDDEGWPDDGYRGDYITELAQAYLAGESVEASDKSVTAAGDADDLDAIREFAVAWL 242

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DL++  +  DIF  E   +  +   +   ++ L   G  Y              
Sbjct: 243 RREQDLDLQSFGVAFDIFFLESSLY--ESGEVESTVERLVESGNTY-------------- 286

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +    L  R+T  GDD DR + K DG YTYF  D+AY   K+ RGF+ +I   G+DH 
Sbjct: 287 --VQDDALWLRTTSFGDDKDRVMRKQDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHH 344

Query: 362 GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+ E   +     +L ++V + RDG  +K+SKRAG ++TLR ++ EVG 
Sbjct: 345 STVTRVRAGLQALGEGIPQGWPEYVLHQMVTVMRDGQEVKLSKRAGSYLTLRDLITEVGR 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++ R  +  L FD      QS +NPVFY+QYA+AR  S+ R+  +    +D DL
Sbjct: 405 DATRYFLVARSPNSQLTFDIDLALSQSNDNPVFYIQYAHARVCSVRRKFLEQGLPVDLDL 464

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +  +   +  E++++  LA +P ++  A  + EP ++A YL +LA  FH +++  
Sbjct: 465 ---DTVALDRLVEPQEIEVLKQLARFPEIVARAGTSAEPQQIANYLRELAGEFHAYYNAH 521

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ +L   RL L  AV  +I +GL ++GV +P  M
Sbjct: 522 K-------VLIDDEELRSARLALTTAVGQVIANGLELLGVSAPESM 560


>gi|47570345|ref|ZP_00240989.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47552987|gb|EAL11394.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 556

 Score =  574 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKVINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|196036513|ref|ZP_03103908.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|218906541|ref|YP_002454375.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228930370|ref|ZP_04093372.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229124865|ref|ZP_04254042.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|195990846|gb|EDX54819.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|218538647|gb|ACK91045.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228658573|gb|EEL14236.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228829293|gb|EEM74928.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|300117879|ref|ZP_07055646.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724743|gb|EFI65418.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYNVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228942510|ref|ZP_04105045.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975443|ref|ZP_04135998.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982076|ref|ZP_04142368.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228777614|gb|EEM25889.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784237|gb|EEM32261.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817103|gb|EEM63193.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326943161|gb|AEA19057.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 330/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++    D D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229118855|ref|ZP_04248202.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664511|gb|EEL20006.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRNTLQNALAIVGVSAPEKM 556


>gi|49481250|ref|YP_039355.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394157|sp|Q6HAS1|SYR2_BACHK RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|49332806|gb|AAT63452.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKSLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|30023394|ref|NP_835025.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|52140201|ref|YP_086631.1| arginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|196040960|ref|ZP_03108257.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196045443|ref|ZP_03112674.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225867345|ref|YP_002752723.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|228917976|ref|ZP_04081508.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229094476|ref|ZP_04225545.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229130611|ref|ZP_04259567.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147903|ref|ZP_04276244.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229158924|ref|ZP_04286981.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|229187591|ref|ZP_04314729.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|254724022|ref|ZP_05185807.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254724717|ref|ZP_05186500.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|296505786|ref|YP_003667486.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|38372513|sp|Q814Q8|SYR_BACCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81685308|sp|Q630N6|SYR2_BACCZ RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|29898955|gb|AAP12226.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|51973670|gb|AAU15220.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|196023650|gb|EDX62326.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196028128|gb|EDX66738.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|225787404|gb|ACO27621.1| arginine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228595843|gb|EEK53525.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228624535|gb|EEK81305.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228635553|gb|EEK92042.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228652950|gb|EEL08832.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228688860|gb|EEL42690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228841641|gb|EEM86753.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|296326838|gb|ADH09766.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|329768518|ref|ZP_08260006.1| arginyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836668|gb|EGF86325.1| arginyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 544

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 218/581 (37%), Positives = 334/581 (57%), Gaps = 39/581 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++   L+    K++++      I +E P++  +G  S+N AM L+R L  +P  IAE
Sbjct: 1   MKNKIVELLQNSLAKLEIDGV---DIHVETPKNTENGDFSSNVAMQLTRVLRKNPRVIAE 57

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I++ I  D  V+ + IAG GFIN ++  S L  ++  I+    +YG N IG+G KV +E
Sbjct: 58  EIISNIDEDEAVEKIEIAGPGFINFFVKKSSLGSVVGKILEDDFKYGENNIGQGKKVLLE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A   D+LA +M  SGY+++REYYINDAG QIN L +S   RY+
Sbjct: 118 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDLSREYYINDAGNQINNLVISAIVRYK 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QAL   D++LP+  Y G  +K +G++L D++   LL    E     +++Y+V   M+ I+
Sbjct: 178 QAL-GMDAELPDDAYHGEDIKVLGQKLKDEFGDSLLE--REDLNEFIREYAVAYEMENIK 234

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    +++D+F SE   +  +   +   +++L  QG+VYE                  
Sbjct: 235 KDLGDFGLEYDVFFSEKSLY--ENGLVDKALESLREQGFVYE----------------KD 276

Query: 307 KQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
             L   +T +G  DD DR L+K+DGS TY  +D+AY K K +RGFD +I V+G+DH GY+
Sbjct: 277 GALWLETTALGTGDDKDRVLIKADGSLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYI 336

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A+  K  Q+ VL+ ++V+L  +G  +KMSKR G  ITLR ++DEVG+D+ R+
Sbjct: 337 ARLKASIVAMGYKAEQLEVLIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 396

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++ R     LDFDF   KEQS +NP++YVQYA+AR  SI RQA +         +    
Sbjct: 397 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQAAEQVE------YDVKN 450

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              E   D   + L+ +LA YP ++  A    EP+++  YL  LAS FH  +++ +    
Sbjct: 451 CDYELLTDEYSVDLLKNLAYYPEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK---- 506

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   N++ T   L L+ AV   + + L++IGV +P +M
Sbjct: 507 ---VITENKEQTQSYLALITAVKITLRNALDLIGVSAPEKM 544


>gi|228936649|ref|ZP_04099442.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228822988|gb|EEM68827.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 556

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|58040184|ref|YP_192148.1| arginyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81351656|sp|Q5FQ54|SYR_GLUOX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|58002598|gb|AAW61492.1| Arginyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 602

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 248/595 (41%), Positives = 357/595 (60%), Gaps = 18/595 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LFA    ++ + L+ +     + ++++ R+ +   RD +HG ++TNAAM+ ++P    P 
Sbjct: 13  LFARTRVQVCDALRSVVP--GLPEEVVQRVDLTPTRDPSHGDMATNAAMLAAKPARRKPA 70

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V ++   P+V     AG GF+NL L P  L+ +  SI+ +G +YGR+ +G+GT+
Sbjct: 71  EIAAELVDKLFALPEVAKAEAAGPGFVNLTLKPEVLQGVAVSILKAGDQYGRSTMGQGTR 130

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+  +G  VTREYYINDAG Q+  L  + +
Sbjct: 131 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLEAAGNTVTREYYINDAGTQVVALTWATY 190

Query: 183 WRYQQALYNNDSD------LPEGY-YPGVYLKHVGKELADKYSSELLNFPE-----EKWL 230
           WRY Q +    S        P G  Y G YL  V + +ADK+   L N          W 
Sbjct: 191 WRYLQVIGTEISADDFSPLTPNGLQYQGEYLIPVAQSIADKHGRALANADGGPADPSVWF 250

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V+  ++  MM  IR+DL+AL I H++F SE +        +   I  L  +G +YEG+
Sbjct: 251 ETVRREALTQMMAAIREDLEALGISHEVFASEAE--TLASGRVDAAIAKLDSKGLLYEGV 308

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +  R Q LFRST  GDD DR L KSDG+ TYFA D+ Y   K E   D
Sbjct: 309 LEPPKGKMPEDWEA-RPQTLFRSTEFGDDQDRALRKSDGTNTYFANDIGYHAQKAE-NAD 366

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I V+G+DH GYV R+ A  +A+++ K    V++C++VR+ ++G P++MSKRAG F+TL
Sbjct: 367 VLIDVLGADHGGYVSRMRAAISALTDGKTGFEVVMCQIVRVVKNGEPVRMSKRAGTFVTL 426

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R ++DEVG D+VRF ML RK    ++FD   V  Q+++NPVFYVQYA+ARCRS+ R A+ 
Sbjct: 427 RDLLDEVGRDAVRFTMLTRKADAQMEFDLDAVVAQTRDNPVFYVQYAHARCRSVLRSAET 486

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           +F                +     EL ++  LA +PR +E A  A+EP+++A Y  DLAS
Sbjct: 487 MFGADTVTPEALCSADLSNLSSDVELAVLRRLAAFPRSVEAAATAREPHRIATYCIDLAS 546

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FH  W+ GRE+  LRF+  N+R  ++ +L LV A+A  +   L I+GV    EM
Sbjct: 547 DFHALWNRGREDTTLRFLHENDRATSLAKLALVSAIAGTLRCALTILGVVPVEEM 601


>gi|75758530|ref|ZP_00738650.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218900490|ref|YP_002448901.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903841|ref|ZP_04067956.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968494|ref|ZP_04129482.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74493964|gb|EAO57060.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218544147|gb|ACK96541.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228791200|gb|EEM38814.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228855750|gb|EEN00295.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 556

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALTVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++    D D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228911203|ref|ZP_04075008.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848379|gb|EEM93228.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 556

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 206/587 (35%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   D ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++    D D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|317496051|ref|ZP_07954411.1| arginyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913626|gb|EFV35112.1| arginyl-tRNA synthetase [Gemella moribillum M424]
          Length = 544

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 222/581 (38%), Positives = 329/581 (56%), Gaps = 43/581 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+N LK ++            I +E P++  +G  S+N AM L+R L  +P  IAE
Sbjct: 5   IVELLQNSLKTLEIDGV-------DIYVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAE 57

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A I  D  V+ V IAG GFIN Y+  S L  I+  I+    +YG N  G+G KV +E
Sbjct: 58  EIIANIPADDAVEKVEIAGPGFINFYVKKSSLGSIIEKILADDCKYGENNTGQGKKVLLE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A   D+LA +M  SGY+++REYYINDAG QIN L +S   RY+
Sbjct: 118 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDISREYYINDAGNQINNLVISAIVRYK 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QAL   ++++PE  Y G  +K +G++L D++S  LL    E     ++DY+V   M  I+
Sbjct: 178 QAL-GLEAEMPEDAYHGEDIKVLGQKLKDEFSDSLLE--REDLESFIRDYAVAYEMDNIK 234

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    +++D++ SE   +  +   +   + +L  QG+VYE                  
Sbjct: 235 KDLGDFGLEYDVYFSEKSLY--EDGLVDKAMASLREQGFVYE----------------KD 276

Query: 307 KQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
             L   +T +G  DD DR L+K+DG+ TY  +D+AY K K +RGFD +I V+G+DH GY+
Sbjct: 277 GALWLETTALGTGDDKDRVLIKADGTLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYI 336

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A+  K  Q+ VL+ ++V+L  +G  +KMSKR G  ITLR ++DEVG+D+ R+
Sbjct: 337 ARLKASIVAMGYKADQLEVLIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 396

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++ R     LDFDF   KEQS +NP++YVQYA+AR  SI RQA +       + +  + 
Sbjct: 397 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQAAEQ------ENYNLDK 450

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              E   D   ++L+  LA YP ++  A    EP+++  YL +LAS FH  ++  +    
Sbjct: 451 CDYELLTDEYSVELLKTLAYYPEIVAQAATNYEPHRICNYLQNLASAFHKFYNSNK---- 506

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   N + T   L L+ AV   + + L +IGV +P +M
Sbjct: 507 ---VITENAEQTQSYLALITAVKITLRNALELIGVSAPEKM 544


>gi|157825222|ref|YP_001492942.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166232832|sp|A8GM09|SYR_RICAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157799180|gb|ABV74434.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 576

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 247/585 (42%), Positives = 366/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NKLKQDIIAASRQLYNNQEIANNATIETPKDNFNGDLSSNIAMIIAAKENIS 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEILITLPYIASIEIAGPGFINFTIKAETWQIAIKDILQHEEKFCEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYFVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P+G YPG YL  +G+ LA++Y ++LL   EE+   IVK+++V+ 
Sbjct: 177 VLLRYREAL-GETITIPDGLYPGEYLIPLGQILAEEYGNKLLMMDEEERFKIVKNFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I + +  L   G +YEGILPPPK K   
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKCAIEETVKLLTGMGLIYEGILPPPKGKVHD 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K +RG  ++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGVSHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+ +I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 EACKYDLSLLSSEEEIAIIKLLASWTKTLETSAKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           E+   RF+  +N++LT  RL L  A+  +I SGL +IGVE  + M
Sbjct: 532 EHSDYRFIIESNKELTTARLALATAIQKVIASGLEVIGVEPMDRM 576


>gi|228949088|ref|ZP_04111358.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228810529|gb|EEM56880.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 556

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGRD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|254231550|ref|ZP_04924877.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis C]
 gi|124600609|gb|EAY59619.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis C]
          Length = 619

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 73  ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 132

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 133 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 192

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 193 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 252

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+ ++ +++  K     L+ P+ +     +   V  M  
Sbjct: 253 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 305

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H G    + + I  L   G +YE               
Sbjct: 306 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 348

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 349 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 407

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 408 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 467

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D +     
Sbjct: 468 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 524

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 525 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 580

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 581 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 619


>gi|70727292|ref|YP_254208.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|109895040|sp|Q4L425|SYR_STAHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68448018|dbj|BAE05602.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 553

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 200/586 (34%), Positives = 311/586 (53%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S L   +K    K  + + I   I +E P+D  +G  STN AM+L++    +
Sbjct: 1   MNIIEKVKSTLIEEIKASIEKANLAEDI-PEIKVEIPKDTKNGDYSTNIAMVLTKVAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  ++   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVIPEAINKGDKFGCAEESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +   ++P   Y G  +  +GK+LADK+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIETRFFEALGDTSHEMPADGYNGKDIIEIGKDLADKH-PEMKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   N+  D + SE   +  +   I + +  +   GY YE           
Sbjct: 239 YEMDKLKKDLADFNVHFDNWFSETSLY--ENGAIDNTLAKMNELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGTYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL +DG+ +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMQDGVEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KE+S++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEKSQDNPIYYAQYAHARICSILKQAKEQGVEVTADA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLAS FH  ++  
Sbjct: 461 DFSTI------TNEKAIDLLKKVAEFEPTIESAAENRAPHRLTNYIQDLASAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + LV AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDAEKTKAHIALVDAVRITLHNALALVGVSAPESM 553


>gi|229065010|ref|ZP_04200308.1| Arginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716311|gb|EEL68023.1| Arginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 556

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 325/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL +  +  D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|332971382|gb|EGK10340.1| arginine--tRNA ligase [Desmospora sp. 8437]
          Length = 564

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 220/587 (37%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERP-RDCAHGHLSTNAAMILSRPLGL 59
           M         L+  ++E   +  +  +     V+    R+ +HG L+TN AM L+R    
Sbjct: 9   MNALERMKENLRQEIREAVLRAGLAAEEELPEVVLEVPREKSHGDLATNMAMQLARIAKK 68

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IAE IV  +  D   V  + IAG GFIN ++  S+LR++L  I  +G  YGR+  G
Sbjct: 69  NPRQIAEAIVDGMNRDRVAVREIHIAGPGFINFFIDRSHLREVLVEIGRAGDAYGRSSAG 128

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVS NPTG +H+GH R A +GD L +++  +GY+VTREYYINDAG QI  + 
Sbjct: 129 NGEKVLVEFVSVNPTGSLHLGHARGAAIGDVLCNVLEAAGYDVTREYYINDAGNQIRNMT 188

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS+  RY++AL     D PE  Y G  +  +GK LA++    LL+  EE+    ++ Y +
Sbjct: 189 LSLEARYREAL-GRKVDFPEDGYRGQDIVDLGKRLAEEEGDRLLSLDEEERFAWIRRYGL 247

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +++ I+ DLK   +Q D + SE   H  D   +++ ++ L R+G  YE          
Sbjct: 248 NRLLEGIKKDLKEYRVQFDSWFSEQSLH--DSGSVQESVEELTRRGQTYE---------- 295

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  +S+  GDD DR L+K DGSYTY   D+AY + KY RGFD ++ + G+
Sbjct: 296 ------QDGALWLKSSQFGDDKDRVLVKQDGSYTYITPDIAYHRNKYNRGFDRIVDIFGA 349

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYV R++A  AA+     ++  L+ ++V+LY+ G  +KMSKR G  ITL  +++EVG
Sbjct: 350 DHHGYVPRMKAAMAALGFDVDKMTFLITQMVKLYQGGELVKMSKRTGKAITLAELMEEVG 409

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R     LDFD      QS ENPVFYVQYA+AR  S+FR+A +   ++  D
Sbjct: 410 VDATRYFFASRGPDSHLDFDMDLAVSQSNENPVFYVQYAHARINSVFRRAGEQGMEVKLD 469

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               + + +E+EFD     L+  LAE+P  I  A     P+++  YLYDLA+    +++ 
Sbjct: 470 PDSLSALQEEAEFD-----LLQKLAEFPEEIATAAKQMAPHRMVRYLYDLATQLQSYYNA 524

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   + +LT  RL L+  VA ++ SGL +IGV +P +M
Sbjct: 525 YR-------VIQEDERLTRARLSLLLGVAQVLKSGLRMIGVSAPEQM 564


>gi|301056832|ref|YP_003795043.1| arginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300379001|gb|ADK07905.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 556

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSEISLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|85860177|ref|YP_462379.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|109895044|sp|Q2LVV5|SYR_SYNAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85723268|gb|ABC78211.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 562

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 211/580 (36%), Positives = 328/580 (56%), Gaps = 31/580 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  +KN +     +  +       + +E  +D  HG  +TN AM+++    ++P  IAE
Sbjct: 13  LTMLVKNAVDGCVAEGLLAGGNFPPVEMEMTKDTVHGDYATNFAMVMASHARMNPRKIAE 72

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +I +     +  ++   IAG GFIN ++  +   + L  I   G  YG    G+G KV +
Sbjct: 73  MISSHFRDGEQILEKTEIAGPGFINFFVRENVWAEQLKDIESLGNHYGSAETGRGKKVQV 132

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R AVVGD +A+++  SGYE+ REYYINDAG Q+N L  SV++RY
Sbjct: 133 EFVSANPTGPLHIGHARGAVVGDVIANILGMSGYEIFREYYINDAGNQMNNLGKSVWYRY 192

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           Q+ L     + P+  Y G Y++ +  ++  K     L   E+  +    DY+   +++ I
Sbjct: 193 QELL-GRSVEFPDTCYQGDYIREIAGDILKKDGDIHLTSNEDSNIRFFTDYAAGIILEEI 251

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DLK   I  D + SE + +  D   +  ++ +L  +G++Y                 D
Sbjct: 252 KQDLKDFGIVFDKYFSERELYVNDG--VARLLADLEEKGFIYR----------------D 293

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            + L F++T  GDD DR +++ +G  TYFAAD+AY K KYERGFD++I + G+DH GY+ 
Sbjct: 294 DETLWFKTTDFGDDKDRVVVRKNGEPTYFAADIAYHKNKYERGFDSVIDIWGADHHGYIP 353

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R+ A   A+   K  + V+L +LV L RDG P+ MS R+G+F+T++ VVDEVG D+ R+ 
Sbjct: 354 RMHAGIQALGHSKDALRVVLVQLVNLLRDGKPVAMSTRSGEFVTMKEVVDEVGRDAARYN 413

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L R++   LDFD    K QS ENPV+YVQYA+AR  SI R AK+   +L       NV 
Sbjct: 414 FLMRRSDSHLDFDLEVAKRQSNENPVYYVQYAHARICSILRMAKERGIELP---SFENVE 470

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           PQ       E+ LI  L  +P V+E +    EP+++ FYL DLA +FH +++  +     
Sbjct: 471 PQLLRI-PEEIALIKTLTRFPEVVEGSARTLEPHRITFYLNDLAGLFHSYYNKYK----- 524

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V +++  +T  RL LV  + +++ + L ++GV +P +M
Sbjct: 525 --VISDDEAMTRTRLFLVKCIQTVLKNALTLLGVSAPEKM 562


>gi|240169522|ref|ZP_04748181.1| arginyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 550

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 191/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + +++ERPR+  HG  ++N A+ L++ +G++P  
Sbjct: 4   ADLAELLKATAAAVLAEHGLDTSALPQTVLVERPRNPEHGDYASNLALQLAKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + S  +AG GFINL L  S   +I++S++ +G  +G + +  G K+
Sbjct: 64  LAGWLAAALTKADGIASAEVAGPGFINLRLETSAQAQIVNSVIDAGDHFGHSDLLAGQKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P   Y G Y+  +   + +K     L+ P+ +     ++  V  M  
Sbjct: 184 AAK------GEPTPADGYAGSYITDIAAHVLEKAPDA-LSLPDPEMRETFREIGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +Y+               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--TGRVDQAIARLRETGNIYQ--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL++ AAA  E  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKSAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEALGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           +
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELG-------LIPD 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E +L+  + E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 452 TAHLELLSHDKEGKLLRTIGEFPRVLETAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEQPTDLHRARLALCQATRQVIANGLAILGVTAPERM 550


>gi|284992535|ref|YP_003411089.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284065780|gb|ADB76718.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 553

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 202/581 (34%), Positives = 305/581 (52%), Gaps = 33/581 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
              + ++  +  +  +  +  ++   +V+ERP++  HG  +TN A+ L++P G  P  +A
Sbjct: 5   QLQAVVRTAVGAVVGRGALPVEVPAEVVVERPKNPEHGDYATNVALRLAKPAGRPPREVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           EL+   ++  P + SV +AG GF+N+ L+   L +I    V +G  YG      G ++N+
Sbjct: 65  ELLAGELRAHPGIASVDVAGPGFLNITLAQGALGRIAVDAVTAGPAYGHTGTLAGQRLNL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+G  R A VGD L  L+  SG  VTREYY NDAGAQI+  A S+    
Sbjct: 125 EFVSANPTGPVHIGGTRWAAVGDALGRLLEASGASVTREYYFNDAGAQIDRFARSLMAAA 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                     +PE  Y G Y+  +  ++       +L  P+E+     ++  V+ M   I
Sbjct: 185 V------GRPVPEDGYAGDYIGEIAAQVVAAE-PGVLELPDEQQQERFRERGVELMFAEI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L A  ++ D++ SE   H  +   +   I  L   G+VYE                 
Sbjct: 238 KRTLAAFGVEFDVYFSERTLH--ETGALEKAIARLRENGHVYEA---------------- 279

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
                 R+T  GDD DRPL+KSDG  TYFAAD AY+  K  RGFD ++ ++G+DH+GYV 
Sbjct: 280 DGATWLRTTDFGDDKDRPLVKSDGDPTYFAADCAYYLDKRSRGFDKVVIMLGADHAGYVG 339

Query: 366 RLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           R  A+ AAV +   A + +LL +LV L RDG P++MSKRAG  + L  +V+ VG+D+ R+
Sbjct: 340 RYRALVAAVGDDPDANLEILLGQLVNLVRDGEPVRMSKRAGTVVLLEDLVEAVGADAARY 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +      + +D D      Q+ +NPVFYVQYA+AR  S+ R A     DL   L     
Sbjct: 400 ALARASVDQQIDLDLDLWSRQTNDNPVFYVQYAHARISSVLRNAA----DLGIALGEPGD 455

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +         E  L+  L E+PRV+ +A   + P+++A YL +LA  +H  +   R  PR
Sbjct: 456 VDAAQLTHERENALLRALGEFPRVLTSAAELRAPHRVARYLEELAGTYHRFYDSCRVLPR 515

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     LT+ RL L  A A ++ +GL ++GV +P  M
Sbjct: 516 G---DEETTPLTVARLWLCAATAVVLRNGLGVLGVSAPERM 553


>gi|302344279|ref|YP_003808808.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640892|gb|ADK86214.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 554

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 199/567 (35%), Positives = 315/567 (55%), Gaps = 33/567 (5%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79
           +  + +       +E+P+   HG L+ N AM+L++P  ++P  +A++I+ R+      ++
Sbjct: 19  EGLLPQVTAPAFAVEKPKQAEHGDLALNLAMVLAKPCRMNPRAVAQIIIERMADAGGLIE 78

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
              IAG GFINL+  P     +   ++  G ++GR  +G G +  +EFVSANPTGP+HVG
Sbjct: 79  RAEIAGPGFINLFCRPLAWLSVAPEVLAQGDDFGRCALGAGRRAQVEFVSANPTGPLHVG 138

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R A +GD +A L+AF+G+EV  EYYINDAG Q+ TL  SV  R +QA   +D   P+ 
Sbjct: 139 HGRGAALGDVMARLLAFAGWEVATEYYINDAGNQMATLGRSVLIRARQAR-GSDEPFPDK 197

Query: 200 YYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
           +Y G Y+  + +EL A    + LL  P+++ + +  D++   ++  I+DDL    +    
Sbjct: 198 HYRGDYIVDLAEELLASPEGAGLLAMPQDQAVDLATDWAGGKILAGIKDDLAVFGVNIAT 257

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           + SE          ++  +D LA +G +YE                    L FRS+  GD
Sbjct: 258 YFSERSLFA--DGKVQAALDELAARGLLYEA----------------DGALWFRSSQFGD 299

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           D DR + +S+G  TYFA+D+AY   K++RGFD ++ + G+DH GYV RL A   A   + 
Sbjct: 300 DKDRVVRRSNGELTYFASDIAYHLDKFKRGFDAVVDIWGADHHGYVPRLRAAVRAAGRQP 359

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
             + V+L ++V L R G P+ MS RAG+F+TLR VVDEVG+DS RF+ L R++   LDFD
Sbjct: 360 EDLTVVLVQMVNLLRGGNPVAMSTRAGEFVTLREVVDEVGADSARFIFLTRRSDAPLDFD 419

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
               K++S +NPVFYVQYA+ R  S+ R+A +                       +E+ L
Sbjct: 420 LDVAKQKSMDNPVFYVQYAHTRVCSVLRKALEAGQG-----QAPPQGLDLGRLGPAEVDL 474

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              + ++P ++  A    EP+++A+YL +LAS FH +++          +  ++  L+  
Sbjct: 475 AKIIGQFPEMVRGAAETLEPHRVAYYLRELASAFHSYYNETH-------ILVDDAALSAA 527

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  AV  ++ +GL ++GV +P  M
Sbjct: 528 RLCLARAVGQVLRNGLALLGVSAPEAM 554


>gi|229170069|ref|ZP_04297760.1| Arginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613416|gb|EEK70550.1| Arginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 556

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 325/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL +  +  D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|228988590|ref|ZP_04148676.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771041|gb|EEM19521.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 556

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 204/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KREKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++        E++     ++Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|302390698|ref|YP_003826519.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302201326|gb|ADL08896.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 568

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 331/594 (55%), Gaps = 38/594 (6%)

Query: 4   FADFSSRLKNYLKEI---DCKIKVEKKIL-----DRIVIERPRDCAHGHLSTNAAMILSR 55
             D  +++++ LKE+     K  V+  ++         IE P+  AHG  + N AM  +R
Sbjct: 1   MKDVKAQIQDKLKELTVSALKKAVDDGVINLTKIPEFNIEVPQAEAHGDFAANVAMTAAR 60

Query: 56  PLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
              + P  IAE+I  R++I    ++ + +AG GFIN YLSP++   ++  I+  G  YGR
Sbjct: 61  EAKMPPRKIAEIIKERMEISGTGIERIEVAGSGFINFYLSPTWAHGVIPVILSEGDAYGR 120

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             IGKG KV +EFVSANPTGPMH+G+ R A +GD LAS++  +GY+VTRE+YINDAG QI
Sbjct: 121 QDIGKGKKVQVEFVSANPTGPMHMGNARGAALGDALASVLEMAGYDVTREFYINDAGNQI 180

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
               LS+  RY + L   +  +PEG Y G  +K   +EL +K     L+    +      
Sbjct: 181 ENFGLSLEARYLELL-GLEGRIPEGGYHGEDIKDHMRELIEKEGDRFLHVDPAERRAYFI 239

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +Y+++  +  ++ DL+   +  D++ SE   H  D   ++++I  L  +GY YE      
Sbjct: 240 EYALKKNIDRMKRDLENFGVHFDVWFSERSLH--DEGKVQEVIRLLTERGYTYE------ 291

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                         L F++T  G   D  L++ +G  TYFA+D+AY K K++RGF+ +I 
Sbjct: 292 ----------KDGALWFKATEFGVPKDEVLVRQNGIPTYFASDIAYHKDKFDRGFEWVID 341

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + G+DH G+V R++   AA+     ++ +++ +LVRLYR+G   +MSKR G  +TL  +V
Sbjct: 342 IWGADHHGHVARMKGALAALGYDPEKLTIIIMQLVRLYRNGEIARMSKRTGRAVTLADLV 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +EVG D+ RF    R     LDFD     +QS+ENPV+YVQYA+AR  SIFRQA +    
Sbjct: 402 EEVGKDAARFFFNLRGADTHLDFDLDLAVKQSEENPVYYVQYAHARISSIFRQAAEQGVA 461

Query: 475 LDF--DLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           +    D  P ++    S+  D +E+QLI  LA++P  I  A     PY++A Y  +LA+ 
Sbjct: 462 VPEVRDRSPEDLEKLLSKLTDETEIQLIKKLADFPGEIRVAASTLSPYRIANYTLELAAA 521

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  ++  R       V  ++  LT  RL LV AV  ++ +   I+G+ +P+ M
Sbjct: 522 FHSFYNVCR-------VLTDDPDLTAARLMLVKAVQQVLRNAFRILGISAPDRM 568


>gi|149377307|ref|ZP_01895053.1| arginyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149358404|gb|EDM46880.1| arginyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 561

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++ L  +  +  +         +   +D +HG  + N A++ S+  G  P  +AE
Sbjct: 5   VSELLQSALATLQSEGTLPADQTFTPQVGNTKDKSHGDYACNIALVASKAAGCPPRKLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V R+     V+ V IAG GFIN ++S +   +++++I+ +  +YGRN  GKG KV +E
Sbjct: 65  ALVERLPDSSAVEKVEIAGPGFINFFMSTASAFEVVNTILDNAGQYGRNNNGKGEKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD L+ L+  +GY+VTRE+Y NDAGAQIN LALSV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLSRLLEANGYDVTREFYYNDAGAQINNLALSVQSR-V 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L  +D + P   Y G Y+  V       E       E+    + +    +++++V  +
Sbjct: 184 KGLTPDDENWPADGYRGDYITDVANAYLAGETVTADDREVTGKADPEDQQAIQEFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  ++ D++  E   +  +   + + ++ L   GY YE             
Sbjct: 244 RREQDLDLKAFGVEFDVYFLESSLY--EDGKVEETVERLQENGYTYEH------------ 289

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +  ++T  GDD DR + K DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 290 ----DGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+  S  K   + +L ++V + R G  +K+SKRAG ++T+R ++DEVG 
Sbjct: 346 STVTRVRAGLQALSASIPKGWPDYVLHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R+    L FD    + Q+ ENPV+Y+QYA+AR  S+ R+ K+   +     
Sbjct: 406 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYIQYAHARICSVLRKLKEEGVERG--- 462

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V          E  L   LA+YP +IE++   +EP+ L  YL DLA  FH +++  
Sbjct: 463 LNECVGDLSLLTLDEEKDLANQLAKYPELIESSAKLREPHHLTHYLRDLAGQFHTYYNAH 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   +  +   R+ L  AV  +I +GL+++GV +P+EM
Sbjct: 523 K-------VLIEDTAIRDARVSLYLAVRQVIANGLDLLGVSAPDEM 561


>gi|332800368|ref|YP_004461867.1| arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332698103|gb|AEE92560.1| Arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 569

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 203/595 (34%), Positives = 324/595 (54%), Gaps = 39/595 (6%)

Query: 4   FADFSSRLKN--------YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55
             D  ++++          L +      +  K +    IE P+D  HG  +TN AMIL+R
Sbjct: 1   MKDLKTQVQQKLMDIVMSALNKAIDDGALPIKDIPDFHIEVPQDKGHGDFATNIAMILAR 60

Query: 56  PLGLDPLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
              + P  I E+I  R+       ++ + +AG GFIN YL P+++  ++S I+  G ++G
Sbjct: 61  EAKMPPRKIGEVIAERVDTTHSNLIEKIEVAGPGFINFYLVPTWVNAVISDILKYGSDFG 120

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R   G+G KV +EFVSANPTGPMH+G+ R A +GD LAS++   G++VT+E+YINDAG Q
Sbjct: 121 RCNTGEGKKVQVEFVSANPTGPMHMGNARGAALGDALASILEMVGFDVTKEFYINDAGNQ 180

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           I    LS+  RY + L     ++PEG Y G  +    K+L ++     L           
Sbjct: 181 IENFGLSLEARYLE-LMGKQGEIPEGGYHGEDIIEHMKDLIEQEGDRFLYMDSPTRRAYF 239

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +Y+++  ++ ++ DL+   +  D++ SE   H      + ++I  L  +GY YE     
Sbjct: 240 INYALEKNIERMKKDLENFGVHFDVWFSEQSLH--SSGKVNEVIKILTDRGYTYE----- 292

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L F+++  G+  D  L++++G  TYFA+D+AY K K++RGFD +I
Sbjct: 293 -----------KDGALWFKASQFGETKDEVLIRANGLPTYFASDIAYHKNKFDRGFDWVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G++ R++    A+     ++ V++ +LVRLYR+G   +MSKR G  +TL  +
Sbjct: 342 NIWGADHHGHIARMKGALEALGYDPDKLTVIIMQLVRLYRNGEIARMSKRTGRAVTLADI 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           V+EVG D+ RF    R     LDFD     +QS +NPV+YVQYA+AR  SI RQAK+   
Sbjct: 402 VEEVGKDAARFFFNLRSADTHLDFDLDLAIKQSDDNPVYYVQYAHARISSILRQAKEQGV 461

Query: 474 DL-DFDLFPRNVIP--QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
           D+ + +   +N +    +   + SE++LI  LA++P  I+ A     PY++  Y  +LAS
Sbjct: 462 DIPNVNNLTQNDMNKYADLLIEESEIELIKKLADFPGEIKLAADNLAPYRITVYSQELAS 521

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FH  ++  R       V  + + LT  RL LV AV  +I + L I+G+ +P+ M
Sbjct: 522 AFHSFYNKCR-------VLTDAQDLTTARLLLVMAVQQVIKNALAILGISAPDRM 569


>gi|67458501|ref|YP_246125.1| arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75537032|sp|Q4UN98|SYR_RICFE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|67004034|gb|AAY60960.1| Arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 576

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 246/585 (42%), Positives = 365/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIAASKQLYNNQEIANTANIETPKDNFNGDLSSNIAMIIAAKESIS 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLTTLPYIASIEIAGPGFINFTIKAESWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL   E +   IVK+++V+ 
Sbjct: 177 VLLRYREAL-GEKITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNENERFKIVKNFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I   +  L   G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEGTVKLLTGMGLIYEGTLPAPKGKVHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G+F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 EEGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASRFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  + M
Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMDRM 576


>gi|229136179|ref|ZP_04264932.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647338|gb|EEL03420.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 556

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEDLVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL +  +  D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++   +  D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAIGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|103486626|ref|YP_616187.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976703|gb|ABF52854.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 575

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 259/586 (44%), Positives = 363/586 (61%), Gaps = 13/586 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF  FS  +   L  +  +  +   +    + +E PRD AHG ++TNAAM+L++  G+
Sbjct: 1   MTLFRRFSDHIGAALDALAARDAIPAGLDRSAVSVEPPRDAAHGDIATNAAMVLAKSAGM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A+L+   +    +V    +AG GFINL L+    R+ L+ I     +YGR+ +G+
Sbjct: 61  NPRALADLLAVELGALDEVVEAGVAGPGFINLRLADDSWREELALIHDLRGDYGRSTMGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ ++G+EV REYY+NDAGAQ++ LA 
Sbjct: 121 GRRVNVEYVSANPTGPMHVGHCRGAVVGDALAALLEYAGHEVIREYYVNDAGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY++AL      +PEG YPG YL  VG++LA ++       PE  WL + +  +V 
Sbjct: 181 SVHMRYREALGEEVGAIPEGLYPGDYLIPVGEKLAAEHGDRFAAAPESAWLALFRAEAVG 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR DL  L I HDIF SE +               L  QG VY+GIL  PK +T 
Sbjct: 241 AMMDMIRADLAKLGIHHDIFSSEAELQA--AGKPAAAEKLLREQGLVYDGILEAPKGETP 298

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +     L FRST  GDD DRP+ KSDGS+TYF ADLAY   K E   D +I + G+D
Sbjct: 299 EDWEPVELPL-FRSTQFGDDQDRPIRKSDGSWTYFGADLAYHFQKSET-ADELIDIWGAD 356

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+G VKR++A  AA++  K + +V L ++VRL ++G P KMSKRAG+F+TL  VVDEVG 
Sbjct: 357 HAGTVKRIKAAVAALTGGKTRFDVKLVQMVRLLKNGEPFKMSKRAGNFVTLADVVDEVGK 416

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRF ML RK    +DFDF +V E S++NPV+Y+QYA AR   + R+A D    L    
Sbjct: 417 DAVRFTMLTRKADAQMDFDFARVVEASRDNPVWYLQYANARISRLRRKAADAGIVLP--- 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P       +EL L+  LA++PR++E A  A+EP+++AFYL D+A+ FH  ++ G
Sbjct: 474 -----APAPERLRANELALVKLLAQFPRIVEAAAFAREPHRIAFYLADVAAAFHAWYNLG 528

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++   R V  N+ +LT  RL L   +  II +GL ++GVE+  EM
Sbjct: 529 NDDSAARIVLDNDPELTATRLYLADGIGQIIRNGLQLMGVEALEEM 574


>gi|169832318|ref|YP_001718300.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688349|sp|B1I6Q5|SYR_DESAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169639162|gb|ACA60668.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 563

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 194/585 (33%), Positives = 319/585 (54%), Gaps = 31/585 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L A     L+  ++     + ++    +    +E PR+  HG  +TN A++L++P    P
Sbjct: 8   LRAGIERALRGAVEAARPDLGLDSGTAIPPFTVEVPREKNHGDFATNLALLLTKPARRSP 67

Query: 62  LTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IAE++V+ + +    V  V +AG GFIN  L P++L  +L  I   G  YGR  +G G
Sbjct: 68  RQIAEILVSHLSLPELLVKEVTVAGPGFINFRLDPNWLHGVLPEIETWGEHYGRRNLGGG 127

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTG +H+G+ R A +GD++A+L++F G++VTRE+Y+NDAG Q+  LALS
Sbjct: 128 RKVQVEFVSANPTGLLHMGNARGAALGDSIAALLSFVGFDVTREFYVNDAGHQVENLALS 187

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  RY QAL   D  +PE  Y G  L         ++     +   ++    +  ++++ 
Sbjct: 188 MEARYFQAL-GRDWPVPEDGYHGEDLIDTAGRFVAEHGDRFASGDPDERRGALLRFALEE 246

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +R  L++  +++D++ SE   +  D   + + ++ L ++G++YE            
Sbjct: 247 KLAAMRATLESFGVRYDVWFSEQSLY--DRGVVGETLELLKKRGHLYE------------ 292

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L F++   G D D  L++ +G  TYFAAD+AY K KY+RGFD +I V G+DH
Sbjct: 293 ----RDGALWFKAGAFGGDKDEVLVRRNGVPTYFAADIAYHKDKYDRGFDWVINVWGADH 348

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V R++   AA+      ++V++ +LVRLYR G  ++MSKR G ++TL  +++EVG D
Sbjct: 349 HGHVPRMKGALAALGYDPDALDVVIMQLVRLYRGGEIVRMSKRTGRYVTLDELLEEVGRD 408

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  + R     LDFD    K ++ ENPV+Y+QYA+AR  SIFRQ ++          
Sbjct: 409 AARYFFVTRGADSHLDFDLDLAKSRTNENPVYYIQYAHARISSIFRQLEERGRTAPG--- 465

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            R +       + +E  LI  LA++P  +  A     P+++A Y++DLA +FH  ++  R
Sbjct: 466 YRKIPDVTLLKEEAERALIRRLADFPDEVAQAAYDLAPHRIAHYVHDLAGLFHHFYNAHR 525

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V      L   RL LV+    ++ + L ++GV +P  M
Sbjct: 526 -------VLGAGDGLEEARLMLVNCTRVVLRNALTLLGVSAPERM 563


>gi|229014529|ref|ZP_04171646.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228746749|gb|EEL96635.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 556

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEDLVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  +  D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|183984076|ref|YP_001852367.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M]
 gi|238690961|sp|B2HR81|SYR_MYCMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|183177402|gb|ACC42512.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M]
          Length = 550

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK+    +  +  ++   L + +V+ERPR+  HG  ++N A+ L++ +G +P  
Sbjct: 4   ADLAELLKSTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I   +     + S  +AG GFINL L  S   KI+++I+ +G  +G + +    KV
Sbjct: 64  LAGWIAEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+  +   +  K     L+ P+ +     ++  V  M  
Sbjct: 184 AAK------GEPTPDDGYAGTYINDIAARVLQKAPDA-LSLPDAQMHETFREIGVDLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   +  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSDG   Y A DLAY+  K ERGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRSSSFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  E  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D D     
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGLIPDTDHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L ++PR+++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLSHEKEGVLLRTLGDFPRMLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +         +L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEEPTQLHTARLALCQATRQVIANGLGILGVTAPERM 550


>gi|42520278|ref|NP_966193.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652693|sp|Q73HY6|SYR_WOLPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42410016|gb|AAS14127.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 568

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 264/586 (45%), Positives = 371/586 (63%), Gaps = 18/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + I IE P +  HG + TN AM+L++    +
Sbjct: 1   MNIFKQISSLIFSKLNELKQRGVISTSAANFI-IEPPSNRVHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGSGFINMHLKIEVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL      + +G YPG YLK +G  LA KY +ELL   E++   +++DY++ +
Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGTGLAKKYGAELL---EKQDNQVIRDYTLSS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++II++D+  L + HD+F SE +  +     I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILEIIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K DGS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 294 NWT-SRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D
Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 473 RTGG----------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            +  +RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EMS
Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLEEMS 568


>gi|227824820|ref|ZP_03989652.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905319|gb|EEH91237.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 552

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 203/585 (34%), Positives = 316/585 (54%), Gaps = 33/585 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +  +   +++      +++  +  +V   P   A G  +TN A+  +R     
Sbjct: 1   MDIKKVLTEAVSEAVQKAIQAGTLKEGKMVPLVFTVPPQKAFGDFATNFALQAARNFHCP 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ +V  +      + + +AG GF+N YL   +L + L+ I+  G  YG      G
Sbjct: 61  PRVIADAVVKYLDCSAV-EKMEVAGPGFLNFYLKSDWLYEGLARILEKGESYGNLPKKAG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ IEFVSANPTGP+HVGH R A VG +LA+LM  +GY+VTREY INDAG Q++ LALS
Sbjct: 120 EKIQIEFVSANPTGPLHVGHGRGAAVGSSLANLMLAAGYDVTREYLINDAGNQMHNLALS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY + L+  +   PE  Y G  +    + + +KY  + L+  E + L   +  +   
Sbjct: 180 VNARYLE-LFGKEVSFPENGYHGEDIIVTARRIKEKYGDKFLHMEETERLSAFQTLAKDE 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +R+DL+A N + D++ SE   H  D   I++ +D L ++ YVYE            
Sbjct: 239 KLAALREDLEAFNCKFDVWFSEQSLH--DAGKIKEAVDTLQKKDYVYE------------ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L FRST  GDD DR +++ +G  TYFAAD+AY + K++RGFD +I + G+DH
Sbjct: 285 ----KGGALWFRSTKFGDDKDRVVIRDNGVSTYFAADIAYHQNKFQRGFDRIINLWGADH 340

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ R++A   A+    + + +L+ ++V LYR+G  +KMSKR G  +TL  +++EVG+D
Sbjct: 341 HGYITRVKAAMEALGYDPSHLEILILQMVSLYRNGELVKMSKRTGKAVTLNELIEEVGTD 400

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  + R     LDFD     E S +NPV+YVQYA+AR  SI +Q ++    LD    
Sbjct: 401 AARYFFIMRSMDSQLDFDLTLATEHSNDNPVYYVQYAHARICSILKQMEEEHIALD---- 456

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      +  E+ LI  L +Y  ++E A   + P+K+A Y+Y+LA +FH  ++  R
Sbjct: 457 --PHCDLSVLGEPVEIDLIKKLGDYEDLVETAAAERAPHKIAHYVYELAGIFHSFYNQCR 514

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V   + KL   RL L+ A    +  GL I+GV +P+ M
Sbjct: 515 -------VLGVDPKLQQARLALIMATRHTLRHGLMILGVSAPDHM 552


>gi|88705210|ref|ZP_01102921.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71]
 gi|88700300|gb|EAQ97408.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71]
          Length = 560

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 194/586 (33%), Positives = 304/586 (51%), Gaps = 37/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            ++ L   L  I    + +      + +ER RD AHG L++N A+  ++ L + P  +A+
Sbjct: 5   VAALLSEALTTIITARQADI-TAPEVQVERTRDAAHGDLASNIALASAKLLKMPPRELAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +  +D   IAG GFIN +LS       L  ++  G  YG N  G G KV +E
Sbjct: 64  TICDALPENTVIDRTVIAGPGFINFFLSKDSQAAALLQVLSEGPRYGHNDSGAGRKVQVE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD+LA ++   G+EV RE+Y NDAGAQIN LALSV  R  
Sbjct: 124 FVSANPTGPLHVGHGRGAAVGDSLARILNACGWEVVREFYYNDAGAQINNLALSVQARC- 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L   D+  PE  Y G Y+  + +     E  +     +    + + L  +++++V  +
Sbjct: 183 KGLTPQDATWPEDSYRGDYIAELAQAYLAGESVEATDKSVTATGDAEDLDAIREFAVAWL 242

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DL++  +  D+F  E   +  +   +   +D L   G  Y              
Sbjct: 243 RREQDLDLQSFGVAFDVFFLESSLY--ESGEVATTVDRLVESGNTY-------------- 286

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              +   L  R+T  GDD DR + K DG YTYF  D+AY   K+ RGF+ +I   G+DH 
Sbjct: 287 --SNDDALWLRTTDFGDDKDRVMRKKDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHH 344

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +     +L ++V + RDG  +K+SKRAG ++TLR +++EVG 
Sbjct: 345 STVTRVRAGLQALKEGIPEGWPEYVLHQMVTVMRDGQEVKLSKRAGSYLTLRDLINEVGR 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++ R  +  L FD      QS +NPVFY+QYA+AR  S+ R+  +    L+   
Sbjct: 405 DATRYFLVARSPNSQLTFDIDLALSQSNDNPVFYIQYAHARVCSVRRKFVEAELSLE--- 461

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +  E   +  E++++  LA +P ++  A  + EP ++A YL DLA  FH +++  
Sbjct: 462 LNPETLSLERLIEPQEVEVLKQLARFPEIVTRAGTSAEPQQIANYLRDLAGEFHAYYNAH 521

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ +L   RL L  AV  +I +GL+++GV +P  M
Sbjct: 522 K-------VLIDDAELRTARLALTTAVGQVIANGLDLLGVSAPESM 560


>gi|229176040|ref|ZP_04303534.1| Arginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607384|gb|EEK64712.1| Arginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 556

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAAGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNSLAIVGVSAPEKM 556


>gi|242281146|ref|YP_002993275.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511640|sp|C6BU27|SYR_DESAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|242124040|gb|ACS81736.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 547

 Score =  571 bits (1473), Expect = e-160,   Method: Composition-based stats.
 Identities = 212/578 (36%), Positives = 334/578 (57%), Gaps = 34/578 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              L+N L  I      E    ++ VIE P+D   G +S N AM+LS+   ++P  IAE 
Sbjct: 4   KQHLENVLGSILEAKGWE--WPEKAVIEPPKDKKFGDMSANIAMMLSKQAKMNPRAIAET 61

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           I + +  D  ++ V IAG GF+N   S S+ + ++  ++  G +YGR+ IGK TK+ +E+
Sbjct: 62  IQSELDGDKYIEKVDIAGPGFLNFTFSNSFWQDLIPEVLTKGEDYGRSEIGKDTKIQVEY 121

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+H+GH R A +GD L  ++ F+GY+V  EYY+NDAG Q+  L  S++ R QQ
Sbjct: 122 VSANPTGPLHIGHGRGAALGDCLVRILEFTGYDVEAEYYVNDAGRQMLILGTSIWVRLQQ 181

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           +   + +D PE +Y G Y+K +  E+ ++ +  +L+  +++ + I ++Y    +++ I+ 
Sbjct: 182 SQGRDIAD-PEDFYKGEYIKDLAAEVLER-NPGILDMSDDEAIAICREYGKDEILEGIKK 239

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL A +++HD++ SE        + + +   +L  +G  YE                +  
Sbjct: 240 DLAAFDVRHDVWFSEKSLVT--ANKVEETFADLKARGMAYE----------------EDG 281

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L F+ST +GDD DR L KS+G  TYFA+D+AY   KY+RGFD ++ + G+DH GY+ R+
Sbjct: 282 ALWFKSTELGDDKDRVLRKSNGDLTYFASDIAYHDDKYKRGFDIVVDIWGADHHGYIPRM 341

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +A   A+  KK Q++V+L +LV L R G  I MS RAG F TL  VV+EVG D+ RFM L
Sbjct: 342 QAAVEALG-KKGQLDVILVQLVNLLRGGEQIAMSTRAGKFETLEDVVNEVGRDASRFMFL 400

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            RK+   LDFD   VK+++ +NPV+YVQYA+AR  S+ R+A D    +       +  P 
Sbjct: 401 SRKSDSHLDFDLELVKQKTMDNPVYYVQYAHARICSVMRKAADQGIAVP----AIDAAPL 456

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            +  +  EL L+  + ++  V ENA     P+ +++YL DLAS  H  +S          
Sbjct: 457 SALTNAEELNLMKLMDQFADVAENAGKNMSPHVISYYLRDLASALHRFYSMHH------- 509

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + +  +   RL L+ AVA  + +GL+++GV +P  M
Sbjct: 510 ILSADEDVIAARLVLLQAVARTLANGLSLLGVSAPESM 547


>gi|229020582|ref|ZP_04177323.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026799|ref|ZP_04183131.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734522|gb|EEL85184.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228740720|gb|EEL90977.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 556

 Score =  571 bits (1473), Expect = e-160,   Method: Composition-based stats.
 Identities = 204/587 (34%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +++E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVILESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|163943048|ref|YP_001647932.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163865245|gb|ABY46304.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 556

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEDLVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL +  +  D++ SE   ++     I   +  L ++  ++E          
Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKQRDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|229490016|ref|ZP_04383869.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229323117|gb|EEN88885.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 550

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 186/582 (31%), Positives = 299/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +     ++  +L   + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I   +     ++S  IAG GF+N+ L       I+ S++ +G  YG      G K+
Sbjct: 64  LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGASYGSGDSLAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   +  K   ++++ P ++     +   V+ M  
Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAASVL-KQRPDVMDLPADEQQETFRAIGVELMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +++L   G ++                
Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L +DG  +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           ++M+       +D D     + S ENPV+YVQYA+AR  +I R A D+    D       
Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + QE +       LI  + EYPRV+ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ +GL ++GV +P +M
Sbjct: 512 QG---DEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550


>gi|226307411|ref|YP_002767371.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511654|sp|C1A1Z7|SYR_RHOE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226186528|dbj|BAH34632.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 550

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 186/582 (31%), Positives = 298/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +     ++  +L   + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I   +     ++S  IAG GF+N+ L       I+ S++ +G  YG      G K+
Sbjct: 64  LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGSSYGSGDSLAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   +  K   +++  P ++     +   V+ M  
Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAASVL-KQRPDVMELPADEQQETFRAIGVELMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +++L   G ++                
Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L +DG  +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           ++M+       +D D     + S ENPV+YVQYA+AR  +I R A D+    D       
Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + QE +       LI  + EYPRV+ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ +GL ++GV +P +M
Sbjct: 512 QG---DEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550


>gi|229034001|ref|ZP_04188951.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728309|gb|EEL79335.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 556

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 327/587 (55%), Gaps = 33/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +K  ++    K ++  ++ +  +V+E P+D  +G  STN AM L+R    
Sbjct: 1   MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE +VA   K    ++ + IAG GFIN Y+  SYL  ++ +IV +G  YG    G
Sbjct: 61  APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA
Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LSV  RY QAL   + ++PE  Y G  +  +GK LA+++         E+     + Y +
Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKLLAEEFGDRYAKADAEESYEFYRSYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  ++ DL++  ++ D++ SE   ++     I   +  L  +  ++E          
Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +     FRS   GDD +R L+K+DGSYTY   D+AY + K ERGFD +I + G+
Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+   K  + V + ++V+LY++G  +KMSKR G  +TLR +++EVG
Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPV+Y QYA+AR  SI RQ +++      D
Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +  + V          E++L+  L E+P V+ +A   + P+++  Y ++LA+  H  ++ 
Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +  +N +L+  R +L+ AV + + + L I+GV +P +M
Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556


>gi|162148009|ref|YP_001602470.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786586|emb|CAP56168.1| Arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 597

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 258/597 (43%), Positives = 360/597 (60%), Gaps = 19/597 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF  + S +++ L+ I     +  ++  R+ +   RD AHG ++TNAA++ ++     P 
Sbjct: 5   LFVRYLSHVRDALRRIVP--DLPDEVAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  + A +   P V     AG GF+N+ L  + LR I+ +++ +G  YG   +G+G +
Sbjct: 63  EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDATLGQGVR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182

Query: 183 WRYQQALYN--NDSDLPEG-----YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY Q +       +          Y G YL  VG+ LA+ + + L          E WL
Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGQALAEAHGTALAEPGAQPAAPEHWL 242

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           P VK + V  MM +IR DL AL ++HD+F SE              I  L  QG +YEG+
Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKILA--DGITDRAIARLDAQGLLYEGV 300

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG D
Sbjct: 301 LEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKILRGAD 359

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            +I V G+DH GYV R++A   A+ E       +VLLC++VR+ RDG P++MSKRAG F+
Sbjct: 360 LLIDVWGADHGGYVTRMKAAVKALGEDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTFV 419

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR ++DEVG D+VRF ML RK    ++FD  +V  Q+++NPVFYVQYA+ARCRS+ R A
Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRAA 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +++    D           +     +EL L+  +A++PR +E A  A EP+++AFYL +L
Sbjct: 480 QEMLGARDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHRIAFYLGEL 539

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  FH  W+ GR++  LRF+Q ++   T  +L LV A A++I SGL ++GV    EM
Sbjct: 540 AGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVTPVEEM 596


>gi|167629021|ref|YP_001679520.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687992|sp|B0TI89|SYR_HELMI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167591761|gb|ABZ83509.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 563

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 200/589 (33%), Positives = 315/589 (53%), Gaps = 30/589 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M        R+   + +     +  K++    +    +E PR+  HG  +TN AM+++R 
Sbjct: 1   MNFVEAIRRRISAAVVQALEGARNAKEVNVGPIPPFALEVPREKQHGDFATNVAMLMARE 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  +AE IVARI     +  V +AG GFIN  L  ++L  +L ++  +   YG + 
Sbjct: 61  ARMNPRQLAEKIVARIDRGDWLKDVQVAGPGFINFTLHHAWLYPVLPAVQQADEAYGASK 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G G +V +EFVSANPTG +H+G+ R A +GDTLA+L+  +G++V +E+YINDAG QI  
Sbjct: 121 VGAGRRVQVEFVSANPTGLLHMGNARGAALGDTLANLLRLAGFDVQKEFYINDAGNQIEN 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            A S+  RY Q L   D   PE  Y G  +    + L  K   + L         ++  Y
Sbjct: 181 FAKSLEARYLQLL-GRDVPFPEEGYHGEDIVETMRGLIAKEGDKYLALESSLRREMLVKY 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +++  +  IR  L+   + +D++ SE   H  D   I+  ++ L   GY+YE        
Sbjct: 240 ALREKLDAIRRTLERFGVVYDVWFSEQSLH--DSGAIQQTLERLRANGYIYEN------- 290

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L F++T +G++ D  L++S+G  TYFAAD+AY K K++RGFD +I + 
Sbjct: 291 ---------EGALWFKATALGEEKDEVLVRSNGIPTYFAADIAYHKNKFDRGFDWVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH G+V R++    AV     +++V+L +LVRLY+ G  ++MSKR G +ITL  +++E
Sbjct: 342 GADHHGHVSRMKNAVKAVGYDPKKLDVILMQLVRLYKGGEIVRMSKRTGQYITLDELIEE 401

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ RF  + R     LDFD    K QS ENPVFYVQYA+AR  SI R A++    + 
Sbjct: 402 VGKDAARFFFVMRGADAHLDFDLDLAKRQSSENPVFYVQYAHARICSILRTAQEAGYAVP 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                   +        +EL LI  +A+ P  +  A    EP+++A Y  DLA++FH  +
Sbjct: 462 QGQQVEAGLDLTVLDHPAELALIRKIADLPDEVARAATQMEPHRMARYAQDLAALFHSFY 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H R       V  + ++L   RL LV     ++ + L+ +G+ +P  M
Sbjct: 522 THCR-------VLTDEKELRDARLLLVDDSRIVLRNVLHCMGLTAPERM 563


>gi|239946988|ref|ZP_04698741.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921264|gb|EER21288.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 576

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 248/585 (42%), Positives = 366/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIAASQQLYNNQEIANTATIETPKDSFNGDLSSNIAMIIAAKESIS 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL   + +   IVK+++V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPVGLYPGEYLIPLGQILAKEYGNKLLTMNDAEKFKIVKNFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I   +  L R G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLANLGIKHDIFFSEQSLH--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+D S++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADRSWSYFASDLAYAKDKIERGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ ++  +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEHVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNSF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +           E+++I  LA + + +E +T   EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 EASKYDLSLLSSEEEIEIIKLLAAWTKTLEASTKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576


>gi|158523225|ref|YP_001531095.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|226701375|sp|A9A099|SYR_DESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158512051|gb|ABW69018.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 556

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 200/580 (34%), Positives = 309/580 (53%), Gaps = 29/580 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++        K  +       I +E PR   HG  +TN AM+ +    + P  IAE
Sbjct: 5   LQAMIRAAATAAFEKGALTASRFPDIELEAPRFRDHGDFATNLAMVSASTQKMAPRKIAE 64

Query: 67  LIVARIKIDPDVD-SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            IVA +     +     IAG GFIN ++ P     +L  I      +G   +G G +V +
Sbjct: 65  AIVAHLADSAGILLKTEIAGPGFINFFICPEAWLPVLHRIHEDQERFGACDLGGGKRVQV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A VGD++A ++AF G++V REYY+NDAG QI TL  SV  R+
Sbjct: 125 EFVSANPTGPLHVGHGRGAAVGDSVARILAFCGWQVHREYYVNDAGNQILTLGRSVLLRW 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++ L     D PE  Y G Y++ + +++  ++   L      + +      +   ++  I
Sbjct: 185 RE-LSGQAVDFPEDCYQGDYIRSIARQIDAEHRQALEKMESAEAVAFCARVAADQILDGI 243

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R DL   +I  D + SE      +   +   +  L   G VYE                 
Sbjct: 244 RRDLADFSITFDQWFSEKSLV--ETGAVETTLARLKETGVVYES---------------- 285

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L F ++  GD+ DR +++++G  TYFA+D+AY K K++RGF+ +I V G+DH GY+ 
Sbjct: 286 EGALWFATSRFGDEKDRVVVRNNGEATYFASDIAYHKNKFDRGFNRVIDVWGADHHGYIP 345

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   AV   +  ++V+L +LV L R+G P+ MS R+G+F+TL+ V +EVG+D+ RF+
Sbjct: 346 RVKAAIGAVGRSQDDLDVILVQLVALLREGQPVSMSTRSGEFVTLKEVTNEVGADAARFI 405

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L R     LDFD    K++S +NPV+YVQY +AR  S+ ++A +              +
Sbjct: 406 FLSRHYDSPLDFDLELAKKKSNDNPVYYVQYVHARIASMLKKAAEEKGIGRVTAVDDKTL 465

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            + +E    E+ L+  LA YP  + +A    EP+++ FYL DLA+ FHG++S  +     
Sbjct: 466 RRLAE--PEEIDLVKLLARYPEAVSHAARFLEPHRITFYLLDLAAGFHGYYSRHK----- 518

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V   +  LTM RL LV AV  +I +GL ++GV +P  M
Sbjct: 519 --VLTEDDGLTMARLYLVCAVKQVIKNGLALLGVSAPESM 556


>gi|89897692|ref|YP_521179.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670842|ref|YP_002461277.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997116|sp|Q24MK7|SYR_DESHY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782959|sp|B8FZ89|SYR_DESHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89337140|dbj|BAE86735.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541102|gb|ACL22841.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 561

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 208/594 (35%), Positives = 326/594 (54%), Gaps = 42/594 (7%)

Query: 1   MYLFADFSSRL----KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L+ +    +         E     ++  + L   V+E PR+  HG  +TN AM+L++ 
Sbjct: 1   MSLYINIKDTIYANLAKAALEAQKAGELSFESLPNYVLEEPREKQHGDWATNLAMVLTKQ 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               P  IA +++  +  +    +   IAG GFIN  L P++L  ++  ++    +YG+ 
Sbjct: 61  ARKAPRDIATILIKHLDTEGTFITASEIAGPGFINFRLDPNWLTGVIPEVLNLEADYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            +G+G KV +EFVSANPTG +H+G+ R A +GD+LA+L+A +GYEV+RE+YINDAG QI 
Sbjct: 121 NLGQGKKVQVEFVSANPTGLLHMGNARGAALGDSLAALLAMAGYEVSREFYINDAGNQIY 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             ALS+  RY Q L   D   PEG Y G  L    K L +K  ++ LN  ++     +  
Sbjct: 181 NFALSLEARYLQ-LMGQDVPFPEGGYHGEDLIDTVKGLIEKVGNKYLNVDQDLRREFLVR 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y+++  +  IR+ L  + + +D + SE   H  D   ++D ++ L +QGY+YE       
Sbjct: 240 YALEEKLTSIRETLTDMGVHYDCWFSEQSLH--DSGFVKDTMEKLEQQGYIYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                           +ST+ GD+ D  +++ +G+ TYFAAD+AY + K+ERGFD +I +
Sbjct: 291 ---------KEGAQWLKSTLFGDEKDEVVVRGNGTPTYFAADIAYHRNKFERGFDRVINI 341

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V R++   +A+      + ++L +LVRL ++G  ++MSKR+G +ITLR ++D
Sbjct: 342 WGADHHGHVARMKGAMSALGYDPENLQIILMQLVRLIQNGEVVRMSKRSGQYITLRELMD 401

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF  + R     ++FD    K +S +NPV+YVQYA+AR  SI RQA +     
Sbjct: 402 EVGKDAARFFFIMRDPDSTVEFDLDLAKAESSDNPVYYVQYAHARLCSILRQAAEQG--- 458

Query: 476 DFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               +    IPQE E        E +L+  +AE P  IE A    EP++LA Y+ DLA +
Sbjct: 459 ----YNTAGIPQEGELKRLQSNEERELLKKIAELPNEIEVAARLTEPHRLARYVLDLAGL 514

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  ++  R       V  +   L   RL LV +   ++ + L I+GV +P  M
Sbjct: 515 FHSFYNSQR-------VLVDEEGLREARLGLVRSTKQVLANVLGILGVTAPERM 561


>gi|304311986|ref|YP_003811584.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797719|emb|CBL45941.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 586

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 206/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + +   S LK  +  +    ++  ++     IER RD  HG  ++N AM+L++P GL P 
Sbjct: 1   MKSKIESLLKAAVAHLQAAHQLPSELSPTYQIERTRDKQHGDFASNLAMMLAKPAGLKPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A+ +V  +  DP +    IAG GFIN YL      +I+  I+  G ++G + +G G  
Sbjct: 61  DLAQQLVNALPADPAIQKTEIAGPGFINFYLQDGSQYQIVPQILSQGAKFGHSKVGAGQY 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EFVSANPTGP+HVGH R A  G TLA+L+   G+ V REYY+NDAG Q+N LA SV+
Sbjct: 121 IQVEFVSANPTGPLHVGHGRGAAYGATLANLLDAVGFRVHREYYVNDAGRQMNILATSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228
            RY + L     + P   Y G Y+  + + + ++     L        + P ++      
Sbjct: 181 LRYLE-LCGVSFNFPSNGYKGGYILEISQAVLNQAGQTWLRSVEAVFQDIPADEPAGGDK 239

Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                +  D ++ +++  IRDDL+   +++  + SE      D 
Sbjct: 240 EEHIDSLIERAKQLLGKDGYKVFFDAALDSILGDIRDDLREFGVEYTEWFSEMSL--TDS 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             ++  ID L   G +YE                    + FRST  GDD DR + + +G 
Sbjct: 298 GSVQRAIDRLQTNGKLYE----------------KDGAIWFRSTEYGDDKDRVVARDNGQ 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   K+ERGFD +I V G+DH GY+ R++A  +A+     ++ VLL +   
Sbjct: 342 TTYFASDIAYHMNKFERGFDRVINVWGADHHGYIARVKAALSALGYDPEKLTVLLVQFAI 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR G  ++MS R+G F+TLR + +EVG+D+ RF  + RK+ + +DFD    K QSK+NP
Sbjct: 402 LYRGGERVQMSTRSGSFVTLRELREEVGNDAARFFYVTRKSEQHMDFDLDLAKSQSKDNP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           ++Y+QYA+AR  SI ++A       D +     +       +  E  L+  LA+YP ++E
Sbjct: 462 IYYIQYAHARVCSILKKAAAESAPWDRE---SGLAHLHLLDNDYEQGLLNQLAKYPELLE 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  EP++LA YL DLA  FH  ++  +       V   +  L   RL L  A+  +I
Sbjct: 519 RAALQYEPHQLAQYLRDLAGEFHSWYNAHK-------VIIEDANLRNARLTLSEAIRQVI 571

Query: 571 NSGLNIIGVESPNEM 585
           N+GL ++GV +P  M
Sbjct: 572 NNGLTLLGVSAPESM 586


>gi|94500579|ref|ZP_01307110.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427369|gb|EAT12348.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 607

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 187/590 (31%), Positives = 311/590 (52%), Gaps = 36/590 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  + +S ++  L+ +    ++      +I+++  +D AHG  ++N AM+ S+  G++P 
Sbjct: 47  MKQELTSLIEQTLESLKQAGQLPADASPKIMVDNTKDKAHGDYASNIAMVSSKMAGMNPR 106

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             AE IV  +   P +    IAG GFIN +++ +    ++ +I+ +   +G N  GKG  
Sbjct: 107 QWAEEIVNALPDSPILKQAEIAGPGFINFFVTEAASFSVVETILDAKETFGHNDSGKGQS 166

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A VGD ++ L+  +G++VTRE+Y NDAGAQI+ LALSV 
Sbjct: 167 VQVEFVSANPTGPLHVGHGRGAAVGDCISRLLEANGWKVTREFYYNDAGAQIDNLALSVQ 226

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYS 237
            R  + L  +D+  PE  Y G Y+  +       +  +          +   L  ++ ++
Sbjct: 227 ARC-KGLTPDDAGWPEDGYRGEYILDLANSFMNGDTIESADQSFTGTKDADDLEGIRHFA 285

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DLKA  +  D++  E   +      + + + NL + GY YE         
Sbjct: 286 VAYLRREQDLDLKAFEVDFDVYFLESSLYA--DGKVEETVQNLIKNGYTYE--------- 334

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D   L  ++T  GDD DR + K DG YTYF  D+AY + K++RGF  +I   G
Sbjct: 335 -------DGGALWLKTTEFGDDKDRVMRKKDGGYTYFVPDVAYHQNKWQRGFKKVINEQG 387

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +DH   + R+ A   A+     +   + +L ++V + + G  +K+SKRAG ++TLR ++D
Sbjct: 388 ADHHSTITRVRAGLQALQAGIPEGYPDYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLID 447

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ R+ +  R  S  L FD    + QS +NPV+Y+QYA+AR  SI R+ +      
Sbjct: 448 EVGRDATRYFLAARAPSSQLTFDIDLARSQSNDNPVYYIQYAHARICSILRKLESEGQSW 507

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D       +   +   +  E  L   LA +P V+  A     P+++A YL++LAS FHG+
Sbjct: 508 DQ---HNGLSKLDRLEEDQEKLLANKLARFPEVVAIAGEQSAPHQVANYLHELASDFHGY 564

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++ +           ++ L   R+ L  AV  ++ +GL ++G+ +P EM
Sbjct: 565 YNNHKT-------IVEDQDLRDARIALTQAVRQVLFNGLYLLGIAAPEEM 607


>gi|260881528|ref|ZP_05404644.2| arginine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848689|gb|EEX68696.1| arginine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 546

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 204/579 (35%), Positives = 303/579 (52%), Gaps = 34/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  ++   K+   +  + +  L ++++E P     G  +TN AM  +R    +P  IAE
Sbjct: 2   LTEAIEQAAKDAIREGALPEGELPQVILEVPPQKEFGDFATNFAMQSARVFHRNPRQIAE 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  RI+ D  +D   IAG GF+N YL  + L      I+ +G  +G        K+ +E
Sbjct: 62  ELAKRIEGD-WLDHTQIAGPGFLNFYLKGNVLYDSFQKILEAGEAFGNLPKLDHPKIQVE 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A  G  L +L+  +GY V  EYYINDAG Q+N LA SV  RY 
Sbjct: 121 YVSANPTGLLHVGHGRGAAAGSALVNLLRAAGYPVESEYYINDAGNQMNNLARSVNARYL 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L   +   PE  Y G  +    + + D+   + L   EE+ L I KD +    + I++
Sbjct: 181 ELL-GKEVTFPEDGYHGQDIIDTAQRIIDRDGDKYLALSEEERLAIFKDLAYHEKLAILK 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +DL+  ++  D + SE   H   P  +R +++ L  +G +YE                  
Sbjct: 240 EDLERFHVTFDNWFSERTLH---PDAVRKVVEILKEKGDIYE----------------KE 280

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L  +ST  GDD DR +++ +G  TY AAD+AY   KYERGFD +I + G+DH GYV R
Sbjct: 281 GALWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHHNKYERGFDRLINIWGADHHGYVCR 340

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+     ++ VLL ++V LYR G  +KMSKR G  +TL  +++EVG+D+ R+  
Sbjct: 341 VKAAMQALGHDPEKLTVLLLQMVSLYRGGELVKMSKRTGQSVTLNELMEEVGTDAARYFF 400

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R     LDFD    K++S +NPV+Y+QYA+AR  SIFRQA++        L       
Sbjct: 401 LMRSLDSQLDFDLDLAKKKSNDNPVYYIQYAHARICSIFRQAEET------KLALGEAPH 454

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   D SE+ LI  + EYP  +  A     P ++A Y YDLA++FH  ++  R      
Sbjct: 455 LELLTDESEVALIKKIEEYPEEVAKAAADYAPQRIARYSYDLAALFHSFYNKCR------ 508

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   +  L   RL LV   A +I   L I+GV +P  M
Sbjct: 509 -IMGVDHDLAEARLALVTVTAHVIRHSLGILGVSAPEHM 546


>gi|120553753|ref|YP_958104.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166232799|sp|A1TYU8|SYR_MARAV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120323602|gb|ABM17917.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 561

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 193/586 (32%), Positives = 300/586 (51%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++ L  +     +         +   +D +HG  + N A++ S+  G  P  +AE
Sbjct: 5   VSELLQSALATLQSDGTLPADQSFTPQVGNTKDKSHGDYACNIALVASKAAGCPPRKLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +  +  V+ V IAG GFIN ++S +    I+++I+    ++GRN  G G +V +E
Sbjct: 65  ALVAALPENSAVEKVEIAGPGFINFFMSTASAFGIVNTILDEAQQFGRNNSGNGERVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD L  L+  +GY+VTRE+Y NDAGAQIN LALSV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEANGYDVTREFYYNDAGAQINNLALSVQSR-V 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L   D   PE  Y G Y+  V       E       E+    + +    +++++V  +
Sbjct: 184 KGLTPEDESWPEDGYRGDYIVDVANAYLAGETVVADDREVTAKADPEDRDAIREFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  +Q D++  E   +  +   +   ++ L   GY YE             
Sbjct: 244 RREQDLDLKAFGVQFDVYFLESSLY--EDGKVEATVERLKANGYTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +  ++T  GDD DR + K DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 289 ---QDGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345

Query: 362 GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +   + +L ++V + R G  +K+SKRAG ++T+R ++DEVG 
Sbjct: 346 STVTRVRAGLQALKADIPQGWPDYVLHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R+    L FD    + Q+ ENPV+Y+QYA+AR  S+ R+          + 
Sbjct: 406 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYIQYAHARICSVLRKLAAEGVQRGMN- 464

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V          E +L   LA+YP +I N+   +EP+ L  YL +LA  FH +++  
Sbjct: 465 --ECVGELSLLTLDEEKELANQLAKYPELIANSAAQREPHHLTHYLRELAGQFHTYYNAH 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   +  L   R+ L  AV  +I +GL+++GV +P EM
Sbjct: 523 K-------VLIEDTALRDARVSLYLAVRQVIANGLDLLGVSAPEEM 561


>gi|148264350|ref|YP_001231056.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083535|sp|A5G3W5|SYR_GEOUR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146397850|gb|ABQ26483.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 561

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 193/587 (32%), Positives = 304/587 (51%), Gaps = 38/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   L        +   +   IVIE+P    HG  +TN AM+L++     P  +AE
Sbjct: 5   LRDLITKELASCFADGSLSSGVFPSIVIEKPAHAEHGDFATNVAMLLAKAEKKAPRVVAE 64

Query: 67  LIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++V+R++   D    + +AG GFIN Y+     R+ L +I  +  +YG++ IG+G K+ +
Sbjct: 65  ILVSRLQESADICSKLEVAGPGFINFYVKDEAWRQTLIAIDRACADYGKSRIGEGKKIQV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L+A  G++VTRE+Y NDAG QI  LALSV  R 
Sbjct: 125 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  +D   P   Y G Y++ V      +E  +     +    + + L  ++ ++V  
Sbjct: 185 L-GIEPDDPRWPLDGYQGDYIRDVARSYLGQETVEADDQHVTAAGDPQDLDAIRRFAVAY 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DL A ++  D++  E   +      +  ++  L   G+ YE            
Sbjct: 244 LRREQDQDLTAFDVHFDVYSLESALYA--EGRVEAVVQRLIDSGHTYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T  GDD DR + K+DG YTYF  D+AY   K+ERGF  +I   G+DH
Sbjct: 290 ----QDGALWLRTTTFGDDKDRVMRKADGGYTYFVPDVAYHLSKWERGFTRVINEQGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+           +L ++V + R G  +K+SKRAG ++TLR ++DEVG
Sbjct: 346 HSTITRVRAGLQALNAGIPVGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + RK    L FD    K+Q+ +NPV+YVQYA+AR  SIF  A +      F 
Sbjct: 406 RDATRFFFVMRKPDSQLVFDIDLAKQQTLDNPVYYVQYAHARICSIFENALERG----FV 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L     +P E      E+ +I  LA +P ++E + +  EP+++ +YL +LA  FH  ++ 
Sbjct: 462 LPAAESVPLERLVTLEEMTIIKTLASFPEILEGSALNFEPHRVTYYLQELAGQFHSFYNR 521

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   + +LT  RL L+  VA  + + L ++G+ +P +M
Sbjct: 522 NR-------VITEDAELTAARLFLLKCVALTLKNALTVLGISAPEKM 561


>gi|241889465|ref|ZP_04776765.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863861|gb|EER68243.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 545

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 216/581 (37%), Positives = 334/581 (57%), Gaps = 39/581 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++   ++    K++++      I +E P++  +G  S+N AM L+R L  +P  IAE
Sbjct: 2   VKNKIVELIQNSLAKLEIDGV---DIHVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAE 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I++ I+ D  V+ + IAG GFIN ++  S L  ++  I+    +YG N IG+G KV +E
Sbjct: 59  EIISNIEEDEAVEKIEIAGPGFINFFVKKSSLGSVVGKILEDDFKYGENNIGQGRKVLLE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +HVGH R A   D+LA +M  SGY+++REYYINDAG QIN L +S   RY+
Sbjct: 119 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDLSREYYINDAGNQINNLVISAITRYK 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QAL   D+++PE  Y G  +K +G++L D++   LL    E     +++Y+V   M+ I+
Sbjct: 179 QAL-GMDAEMPEDAYHGEDIKVLGQKLKDEFGESLLE--REDLNEFIREYAVAYEMENIK 235

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    +++D+F SE   +  +   +   +++L  QG+VYE                  
Sbjct: 236 KDLGDFGLEYDVFFSEKSLY--ENGLVDKALESLREQGFVYE----------------KD 277

Query: 307 KQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
             L   +T +G  DD DR L+K+DGS TY  +D+AY K K +RGFD ++ V+G+DH GYV
Sbjct: 278 GALWLETTALGTGDDKDRVLIKADGSLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYV 337

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A+  K  Q+  L+ ++V+L  +G  +KMSKR G  ITLR ++DEVG+D+ R+
Sbjct: 338 ARLKASVVAMGYKADQLEALIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 397

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++ R     LDFDF   KEQS +NP++YVQYA+AR  SI RQA +         +    
Sbjct: 398 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQAAEQAE------YDVKN 451

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              E   D   + L+ +LA YP ++  A    EP+++  YL  LAS FH  +++ +    
Sbjct: 452 CDYELLTDEYSVDLLKNLAYYPEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK---- 507

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   N++ T   L L+ AV   + + L++IGV +P +M
Sbjct: 508 ---VITENKEQTQSYLALITAVKITLRNALDLIGVSAPEKM 545


>gi|167757354|ref|ZP_02429481.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402]
 gi|167703529|gb|EDS18108.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402]
          Length = 554

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 202/587 (34%), Positives = 329/587 (56%), Gaps = 35/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M       + LK  LK+       VE+   + I IE P+D +HG  STN AM L++ L  
Sbjct: 1   MMAINKIEATLKGALKQAIIACGFVEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLKR 60

Query: 60  DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IAE I+  + K + +++ V IAG GFINL+L+   +  I+  ++     YG    G
Sbjct: 61  NPRQIAEAIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTYG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +GTK N+EFVSANPTG +H+GH + A VGD++  +M+ +GY+VTREYYINDAG QI+ LA
Sbjct: 121 QGTKYNVEFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS++ RY+QA +  D  +PE  Y G  +  +  ++ +    + L   E K +   ++   
Sbjct: 181 LSLYARYKQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKGT 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I+D L    +  D++ SE   +  D   +   I+ L   GY YE          
Sbjct: 240 EYELQKIKDILNEFRVSFDVWFSETSLYEND--RVVPTIEKLKAAGYTYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +   L F+ST  GDD DR L+KSDGSYTY   D+AY   K +RG++ ++ ++G+
Sbjct: 288 ------EEGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     Q+N+ + ++VR+  +G P+KMSKR G+ +T++ +++E+G
Sbjct: 342 DHHGYINRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+  + +  +   DFD    K +S ENPV+Y QYA+AR  SI  +A+    ++D+ 
Sbjct: 402 VDATRYFFVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSI--KAQAAKANIDYS 459

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                    +   +  E++L+ H+ E+  VI ++ I + P+K+  Y+  LA +FH  ++ 
Sbjct: 460 D------KYDLLVNPKEIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFYNE 513

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +N +L+  RL LV A    + + LN+IGV +P +M
Sbjct: 514 CY------VIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 554


>gi|269216290|ref|ZP_06160144.1| arginine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130549|gb|EEZ61627.1| arginine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 601

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 194/597 (32%), Positives = 311/597 (52%), Gaps = 36/597 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D    +++ L        ++ + +  I++ERPRD  HG  ST  A+  ++    +
Sbjct: 29  MQPREDLGKLVQSALSASIASGAIQLEEVPEILLERPRDVGHGDWSTPVALRCAKAAHKN 88

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ IV  +     V+ V IAG GFIN YL    L+ +++ +   G +YG+  I +G
Sbjct: 89  PREIAQTIVDALPEADFVEQVEIAGPGFINFYLKDGALQNVIADVRAQGADYGKGEIPEG 148

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV IE++S+NPTGPMHVGH R A +G  +A LM  +GYEV  E+YIND G Q++    
Sbjct: 149 MRKVLIEYISSNPTGPMHVGHGRWAALGSAMAKLMQHAGYEVDEEFYINDHGVQMDKFGQ 208

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY   L  +++++PEG Y G Y+  + + L ++     +N  E + +   +++   
Sbjct: 209 SIVARYLTQL-GHETEVPEGGYNGGYVNDIARALIERDGDRWVNADEHERMVEFREFGYA 267

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-----RGDPSPIRDIIDNLARQGYVYEGILPPP 294
           A+++ IR            + SE + +         SP+   +  L   G VY+      
Sbjct: 268 ALLENIRKVCDEFGTVFQYWQSERELYVPNEKWDGMSPVDYCLSKLRENGDVYD------ 321

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                         + FRS+  GD+ DR ++KSDG YTYFA+D+ Y   K  RG+D +I 
Sbjct: 322 ----------KDGAVWFRSSKYGDEKDRVVIKSDGEYTYFASDVGYHYIKKLRGYDKLID 371

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + G+DH GY+ R+ AV AA+      + V L +LV L+R G P++MSKR G+ IT   ++
Sbjct: 372 IWGADHHGYIPRVAAVLAAMGY-PGALEVPLGQLVNLFRGGKPVRMSKRTGEMITFEELI 430

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +EVG D+ R+ ML R   + +DFD  + K+Q   NPV+YVQYA+AR  S+ R A     +
Sbjct: 431 EEVGVDATRWKMLERSTDQPIDFDIEEAKKQDASNPVYYVQYAHARICSLLRNAAGHSGE 490

Query: 475 --LDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
             LD        IP + +     + SEL L+  ++E+  ++  A   + P++L  Y  +L
Sbjct: 491 DNLDMSAVASECIPADVDLSLLTEESELALMRKMSEFGDLVALAARDRAPFRLTHYAQEL 550

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A +FH  +++         ++A +  L   RL L  A   ++   L I+G+ +P  M
Sbjct: 551 AGMFHQFYTNC------PVLKAEDESLKQARLALADATRIVLEIALGIMGISAPQRM 601


>gi|209542625|ref|YP_002274854.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530302|gb|ACI50239.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 597

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 257/597 (43%), Positives = 360/597 (60%), Gaps = 19/597 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           LF  + S +++ L+ I     +  ++  R+ +   RD AHG ++TNAA++ ++     P 
Sbjct: 5   LFVRYLSHVRDALRRIVP--DLPDEVAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  + A +   P V     AG GF+N+ L  + LR I+ +++ +G  YG   +G+G +
Sbjct: 63  EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDAALGQGVR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182

Query: 183 WRYQQALYN--NDSDLPEG-----YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY Q +       +          Y G YL  VG+ LA+ + + L          E WL
Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGRALAEAHGTALAEPGAQPAAPEHWL 242

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           P VK + V  MM +IR DL AL ++HD+F SE              I  L  QG +YEG+
Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKILA--DGITDRAIARLDAQGLLYEGV 300

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK K  +  +  R Q LFRST  GDDVDRPL KSDGS TYFA D+ Y   K  RG D
Sbjct: 301 LEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKIRRGAD 359

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            +I V G+DH GYV R++A   A+ +       +VLLC++VR+ RDG P++MSKRAG F+
Sbjct: 360 LLIDVWGADHGGYVTRMKAAVKALGKDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTFV 419

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR ++DEVG D+VRF ML RK    ++FD  +V  Q+++NPVFYVQYA+ARCRS+ R A
Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRAA 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +++    D           +     +EL L+  +A++PR +E A  A EP+++AFYL +L
Sbjct: 480 QEMLGAQDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHRIAFYLGEL 539

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  FH  W+ GR++  LRF+Q ++   T  +L LV A A++I SGL ++GV    EM
Sbjct: 540 AGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVTPVEEM 596


>gi|294102407|ref|YP_003554265.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617387|gb|ADE57541.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 558

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 203/587 (34%), Positives = 322/587 (54%), Gaps = 34/587 (5%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
            AD    L+  L E    +  EK +    +    IE+P++  HG  +TNAAM L+R    
Sbjct: 1   MADVLRTLRQLLDEAVLSMAEEKNVAIDDIPEFAIEKPKNEGHGDWATNAAMQLARIFHD 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +AE IV+R+       +V IAG GFIN  LS  ++ +++  I+    +YGR  IG 
Sbjct: 61  NPRKLAEQIVSRLADCDYFTAVEIAGPGFINFRLSKKWMGEVVKDIITLDDDYGRQNIGG 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV +EFVSANPTGP+HVGH R A VGD +A ++ F+G++V +EYYINDAG Q+  L  
Sbjct: 121 GEKVQVEFVSANPTGPLHVGHGRGAAVGDIIARILDFTGWQVEKEYYINDAGLQMEILGR 180

Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           S   RY + L     +  PE  Y G Y+  + +E+ D+     L+ P E+ L   + Y+ 
Sbjct: 181 STQSRYFKLLNCPERAPFPEDAYKGEYIYDLAREIIDQEGDRFLSLPLEESLGFFQTYAA 240

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +++ I+ DL    + +D++ SE   +  D + +   ++ L + GY YE          
Sbjct: 241 GRILEGIKKDLADFGVAYDVWFSEKSLY--DRNLVPQAMEMLNKHGYAYE---------- 288

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +   L FR+T  GD+ DR L++++G  TYFA+D+ Y   K+ RGF  +I V G+
Sbjct: 289 ------EEGALWFRATAFGDEKDRVLIRNNGVPTYFASDITYHMEKFSRGFQRVIDVWGA 342

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYV R++A   A+ +++  + V+L + V L R G  + MS R+G F+TLR V+DEVG
Sbjct: 343 DHHGYVPRMKAGVEALGKERGSLEVVLIQFVNLLRGGEQVAMSTRSGQFVTLRDVMDEVG 402

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+  + R++   LDFD    K+ S ENPV+YVQYA+AR  S+ ++A++    +   
Sbjct: 403 VDATRYFFVMRRSDSHLDFDLELAKQSSNENPVYYVQYAHARICSVLKEAENRHIPMPG- 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                    E      E +L+  L+ +P+ ++ A + + P+ +  + YDLA+ FH  ++ 
Sbjct: 462 ---LAGFNPELLVSDEEKKLVNRLSLFPQEVKRAALDRAPHVIVSFAYDLAADFHSFYNA 518

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       +    + +  MRL LV A  S+++  L ++GV +P  M
Sbjct: 519 NR-------ILGERQDIMDMRLLLVQASKSVLSRSLKLLGVSAPERM 558


>gi|323142043|ref|ZP_08076891.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413430|gb|EFY04301.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 574

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 201/604 (33%), Positives = 307/604 (50%), Gaps = 49/604 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ +K+  ++      ++   L  +++E P     G  +TN AM  +R L   
Sbjct: 1   MDIKDLLAAAIKDAAQKAIDNGTLKPGTLPEVMLEVPPQKEFGDFATNFAMQSARSLHCA 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ +V  +     VD + IAG GFIN YL  ++   +L+ I+ +G  YG       
Sbjct: 61  PRQIAQAVVDNLDC-ASVDKMEIAGPGFINFYLKQNWTADLLAGILAAGENYGNLPANGL 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +E+VSANPTGP+HVGH R A VG  + +L+  +GY+V  EYYINDAG Q+N LA S
Sbjct: 120 GRVQVEYVSANPTGPLHVGHARGAAVGSAMVNLLRAAGYDVESEYYINDAGNQMNNLANS 179

Query: 181 VFWRYQQALYNND-------------------SDLPEGYYPGVYLKHVGKELADKYSSEL 221
           V  RY Q L   +                      PE  Y G  +    + +   Y  E 
Sbjct: 180 VNARYLQLLKLEEMGGVPADLTVKQLDEMPTGIPFPENGYHGYDIIETAQRIIRIYGKEF 239

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +   E++ L    + + +  +  +++DL+A  +  D++ SE   H  D   IR+    L 
Sbjct: 240 VALEEKERLAKFLEIAYKEKLAGLKEDLEAFGVTFDVWFSEQSLH--DADKIREACKFLE 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G VYE                      F ST  GDD DR +++ +G  TYFAAD+AY 
Sbjct: 298 EKGCVYE----------------KDGAKWFNSTAYGDDKDRVVIRDNGVSTYFAADIAYH 341

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           + K+ERGFD +I + G+DH GY+ R++A   A+     ++ VLL ++VRLYR+G  +K+S
Sbjct: 342 RNKFERGFDRIINLWGADHHGYIARVKAAVNALGFDADKLEVLLLQMVRLYRNGDIVKLS 401

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           KR G+ ITLR ++DEVG D+ R+    R     LDFD     E+S ENPV+Y+QYA+AR 
Sbjct: 402 KRTGETITLRELMDEVGVDAARYFFCMRSLDSQLDFDMTLATEKSNENPVYYIQYAHARI 461

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI RQ  +   +        + +  ++     EL L+  L EYP ++  A   +  + +
Sbjct: 462 CSIARQLAEAGIEA----VALDELKLDTLQAPEELALVKKLGEYPELLARAARERAVHHV 517

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y Y+LA++FH  ++  R       +   +  L   R+ LV AV   I   L I+GV +
Sbjct: 518 ATYTYELATLFHSFYNQCR-------ILGVDTDLQQARIALVKAVGHTIRHALGILGVSA 570

Query: 582 PNEM 585
           P  M
Sbjct: 571 PERM 574


>gi|224541964|ref|ZP_03682503.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525104|gb|EEF94209.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM
           15897]
          Length = 568

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 203/584 (34%), Positives = 317/584 (54%), Gaps = 39/584 (6%)

Query: 8   SSRLKNYLKEIDCK-----IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
            ++L+N LK    +      +      + I+IE P+D  HG  STN AM L+R L  +P 
Sbjct: 18  ENKLENSLKIAIGQSVNKCFEAVDITPENIMIEIPKDSTHGDYSTNIAMQLTRTLHKNPR 77

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA  IV  +  +    + V IAG GFIN ++    L  +++ ++     YG+   G+G 
Sbjct: 78  EIATAIVDSLDQEAAHVEKVEIAGPGFINFFMKNDALTSVIAEVLSEKDNYGQTHFGEGK 137

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K N+EFVSANPTG +H+GH + A VGD++  +M  +GY+VTREYYINDAG QI  LALS+
Sbjct: 138 KYNVEFVSANPTGDLHLGHAKGAAVGDSICRIMTKAGYDVTREYYINDAGKQITNLALSL 197

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + RY  AL++ +  +PE  Y G  +  + K + +K    L    EE+ +   +    +  
Sbjct: 198 YSRYL-ALFDIERPIPEDGYMGQDVIDIAKSIKEKEGDALTQLTEEEAIAYFRKVGTEHE 256

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++ I+D LK   +  D++ SE   + G+   I   I+ L  +GY YE             
Sbjct: 257 LQKIKDILKEFRVSFDVWFSETSLYEGN--KIEPAINKLKEKGYTYE------------- 301

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L FR+T  GDD DR L+K+DGSYTYF  D+AY   K  RG+D ++ ++G+DH 
Sbjct: 302 ---QDGALWFRTTDFGDDKDRVLIKTDGSYTYFTPDIAYHLSKLNRGYDYLVDLLGADHH 358

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+ R++A   A+     Q+N+ + ++VR+  +G  +KMSKR G+ +T+R ++D++G D+
Sbjct: 359 GYINRMKAAIQALGYNADQLNIDILQMVRMVENGEVVKMSKRTGNAVTIRDLIDDIGVDA 418

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+  + +  +   DFD    K QS ENPV+Y QYA+AR  SI R A +   +       
Sbjct: 419 TRYFFVAKAANTPFDFDLGLAKSQSNENPVYYAQYAHARMCSIMRSAAEKNIE------- 471

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                 E   +  E++L+ H+ E+   I +A   + P+K+A Y+  LA +FH  +     
Sbjct: 472 -PADHFELINNPKEIELLKHINEFKNTINDAARTRAPHKIANYIQRLAQLFHSFYGDCH- 529

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   N++L+  RL LV A    I + LN+IGV +P +M
Sbjct: 530 -----VIDEENKELSSQRLALVEATRITIANALNLIGVHAPEKM 568


>gi|157964131|ref|YP_001498955.1| arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157843907|gb|ABV84408.1| Arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 578

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 247/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 3   MNIF----NQLKQDIIVASRQLYNNQEIANTATIETPKDSFNGDLSSNIAMIIAAKESIS 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 59  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 119 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL   + +   I+K ++V+ 
Sbjct: 179 VLLRYKEAL-GEQMTIPAGLYPGEYLIPLGQILAKEYGNKLLTMNDAERFKIIKSFAVEK 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I   +  L R G +YEG LP PK K  +
Sbjct: 238 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEATVKLLERMGLIYEGTLPAPKGKIHE 295

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 296 EWD-NRVQKLFKSTKYGDSQDRPIAKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 354

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 355 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 414

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F
Sbjct: 415 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNHF 473

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E A    EP+++AFYL +LAS  H  W+ G+
Sbjct: 474 EAGKYDLSLLSSEEEIEIIKLLASWTKTLEAAAKYFEPHRIAFYLINLASKVHSMWNFGK 533

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 534 ENSDYRFVIESNKELTLARLALASAIRKVIASGLEVIGVEPMNKM 578


>gi|227487946|ref|ZP_03918262.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092037|gb|EEI27349.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 549

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 188/582 (32%), Positives = 302/582 (51%), Gaps = 37/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD ++ +K   + I         + + + +ERPR+  HG  +TN A+ +++  G++P  +
Sbjct: 4   ADLATLVKKTAESILPD---PSVLPEEVTVERPRNPEHGDYATNLALQVAKKAGMNPREL 60

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            + +   +  DP ++S  IAG GFINL L+ +   +I++ ++  G ++G + +  GTK+N
Sbjct: 61  GQKLADALSEDPAIESAEIAGPGFINLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKIN 120

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD+L  ++ FSG EVTREYY ND G QI+  A S+   
Sbjct: 121 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAA 180

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y+K +   +  +  + L    +E+     + + V+ M   
Sbjct: 181 AK------GEPTPEDGYGGDYIKDIAAAVVKEVPTALKG-SDEEVQETFRAHGVEMMFDH 233

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+  L       D+F  E+     +   +   ++ L   G +YE                
Sbjct: 234 IKKSLAEFGTHFDVFFHENSLF--ESGAVEKAVEKLKSSGELYEA--------------- 276

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                  +ST  GDD DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY+
Sbjct: 277 -DGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYI 335

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A AAA+     ++ V++ ++V L RDG  +KMSKRAG  ITL  +V+ +G D+ R+
Sbjct: 336 ARLKAAAAALGYDADRVEVMIGQMVNLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRN 483
            ++       LD D      QS +NPV+YVQY +AR  S+ R+A+ I   + D D    +
Sbjct: 396 SLIRSSVDSTLDIDLDLWAAQSSDNPVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLS 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+ +A   +EP+++A Y   LA+ FH  +      P
Sbjct: 456 LLTHEREGD-----LIRTLGEFPSVVASAAELREPHRIARYAEQLAATFHRFYDTCHVLP 510

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      + + R  L  A    + + L ++GV +P  M
Sbjct: 511 GQ---DEEVEPIHVARFALAMATRQTLANALGLVGVTAPERM 549


>gi|242372836|ref|ZP_04818410.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349455|gb|EES41056.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 553

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 198/586 (33%), Positives = 313/586 (53%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K ++ + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEIEASIKKARLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL +++   +  G ++G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKEVDIAGPGFINFYLDNHYLTEVIPEAIHKGDKFGYADEPK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NKNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++PE  Y G  +  +GK+LADK+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIETRYFEALGDTSHEMPEDGYNGKDIIEIGKDLADKH-PEIKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL A N+  D + SE   +  +   I + +  +   GY YE           
Sbjct: 239 YEMDKLKKDLAAFNVHFDNWFSETSLY--ENGAIDNTLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGVEITTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +AE+   IE+A   + P++L  Y+ DLAS FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVAEFETTIESAAEHRAPHRLTNYIQDLASAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDAEKTKAHVAMIEAVRITLHNALTLVGVTAPESM 553


>gi|117924014|ref|YP_864631.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|238685476|sp|A0L5I2|SYR_MAGSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|117607770|gb|ABK43225.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 575

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 222/584 (38%), Positives = 342/584 (58%), Gaps = 18/584 (3%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
               +++    +  +  +     L  I +ERP+D +HG  S N AM+L++   + P  +A
Sbjct: 5   IEELMEHAQNTLLAEGVIPADAKLGGIKVERPKDKSHGDFSINTAMVLAKQARMKPRDLA 64

Query: 66  ELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +V  +      V    IAG GFIN +++P  LR +++ ++  G  YG+  +G G KV 
Sbjct: 65  QRLVDALPSGQGVVSRCEIAGPGFINFFVTPERLRGVVADVLQRGGSYGQGNVGAGQKVL 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMHVGH R AV GD LA ++  +GY V REYY+NDAG Q+  L  SV  R
Sbjct: 125 VEFVSANPTGPMHVGHGRGAVTGDVLARILECAGYAVQREYYLNDAGVQVQVLGRSVMLR 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSVQAM 241
           Y+Q L+ +  ++ EG YPG Y+  + + L +K   + L       +++   + ++++Q +
Sbjct: 185 YRQ-LFGDAVEVAEGCYPGDYVVDIARALKEKDQDKWLEVARAEPDEYPREMLEFAMQQV 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I+ DL  LNI+ D + SE   H      I   ++ L+++G +YEG+L PPK K ++ 
Sbjct: 244 LTWIKADLARLNIRFDHWFSEFSLH--SEGRIEHALEVLSQKGCLYEGVLEPPKGKKSEA 301

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
               R QLLF++T  GD+VDR L KSDGSYTYFAAD+AY   K ERGF+ ++ + G+DH 
Sbjct: 302 W-ASRPQLLFKATDFGDEVDRALRKSDGSYTYFAADVAYHLNKAERGFERLVNIWGADHG 360

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV+R++A   A++ K+  ++V+L ++V L R G P+KMSKRAG F+TL  VV+   SD+
Sbjct: 361 GYVRRVQAALGALTGKQNLLDVVLIQMVNLTRGGEPVKMSKRAGTFVTLEEVVEATSSDA 420

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRF  L R +   LDFD      ++ +NPV+YVQYA+AR  SI+ +A+     L      
Sbjct: 421 VRFWFLSRGSGAQLDFDLDLAVAKNNDNPVYYVQYAHARICSIWDKAQHEGVALQAQ--G 478

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + +      + +E  LI  L  +P V+E A + QEP+++ +YL DLA+ FH  ++  R 
Sbjct: 479 WSGVDLSPLGEGAEWDLIRKLDLFPDVVEGAAVHQEPHRIPYYLLDLAAAFHTFYNSHR- 537

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   +      RL L+ AV  +I +GL ++GV+ P  M
Sbjct: 538 ------IMDVDAGTRDARLVLILAVKQVIANGLELLGVQQPRSM 575


>gi|223042942|ref|ZP_03612990.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443796|gb|EEE49893.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 553

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEIEASIKKAGLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         + IAG GFIN YL   YL +I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++PE  Y G  +  +GK+LA+K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIETRYFEALGDTSHEMPEDGYNGKDIIEIGKDLANKH-PEIKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   N+  D + SE   +  +   I + +  +   GY YE           
Sbjct: 239 YEMDKLKRDLADFNVHFDNWFSETSLY--ENGAIDNTLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI RQAK+   D+  + 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTN- 459

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   ++  +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 460 -----ANFDTITNEKAIDLLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553


>gi|227542588|ref|ZP_03972637.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181786|gb|EEI62758.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 549

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 188/582 (32%), Positives = 302/582 (51%), Gaps = 37/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD ++ +K   + I         + + + +ERPR+  HG  +TN A+ +++  G++P  +
Sbjct: 4   ADLATLVKKTAESILPD---PSVLPEEVTVERPRNPEHGDYATNLALQVAKKAGMNPREL 60

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            + +   +  DP ++S  IAG GFINL L+ +   +I++ ++  G ++G + +  GTK+N
Sbjct: 61  GQKLADALSEDPAIESAEIAGPGFINLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKIN 120

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD+L  ++ FSG EVTREYY ND G QI+  A S+   
Sbjct: 121 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAA 180

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y+K +   +  +  +  L   +E+     + + V+ M   
Sbjct: 181 AK------GEPTPEDGYGGDYIKDIAAAVVQEVPTA-LEGSDEEVQETFRAHGVEMMFDH 233

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+  L       D+F  E+     +   +   ++ L   G +YE                
Sbjct: 234 IKKSLAEFGTHFDVFFHENSLF--ESGAVEKAVEKLKSSGELYEA--------------- 276

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                  +ST  GDD DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY+
Sbjct: 277 -DGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYI 335

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A AAA+     ++ V++ ++V L RDG  +KMSKRAG  ITL  +V+ +G D+ R+
Sbjct: 336 ARLKAAAAALGYDADRVEVMIGQMVNLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRN 483
            ++       LD D      QS +NPV+YVQY +AR  S+ R+A+ I   + D D    +
Sbjct: 396 SLIRSSVDSTLDIDLDLWAAQSSDNPVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLS 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+ +A   +EP+++A Y   LA+ FH  +      P
Sbjct: 456 LLTHEREGD-----LIRTLGEFPSVVASAAELREPHRIARYAEQLAATFHRFYDTCHVLP 510

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      + + R  L  A    + + L ++GV +P  M
Sbjct: 511 GQ---DEEVEPIHVARFALAMATRQTLANALGLVGVTAPERM 549


>gi|311693359|gb|ADP96232.1| arginyl-tRNA synthetase [marine bacterium HP15]
          Length = 561

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 190/586 (32%), Positives = 301/586 (51%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++ L  +     +         +   +D +HG  + N A++ S+  G  P  +AE
Sbjct: 5   VSDLLQSALAALQADGTLPADQSFTPQVGNTKDKSHGDYACNIALVASKAAGCAPRKLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  +     V+ V IAG GFIN ++S +   +++++I+  G  +GRN  G+G KV +E
Sbjct: 65  ALVENLPESSAVEKVEIAGPGFINFFMSTASAFEVVNTILDEGDRFGRNNQGQGEKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD L  L+  +GY+VTRE+Y NDAGAQI+ LALSV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEANGYDVTREFYYNDAGAQIDNLALSVQSR-V 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L  +D   P   Y G Y+  V K             E+    + +    +++++V  +
Sbjct: 184 KGLTPDDESWPADGYRGDYIVDVAKAYLAGDTVTADDREVTAKADPEDRDAIREFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  +Q D++  E   +  +   +   +  L   GY YE             
Sbjct: 244 RREQDLDLKAFGVQFDVYFLESSLY--EDGKVEATVKRLQENGYTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +  ++T  GDD DR + K DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 289 ---QDGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +   + +L ++V + R G  +K+SKRAG ++T+R ++DEVG 
Sbjct: 346 STVTRVRAGLQALNAGIPQGWPDYVLHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R+    L FD    + Q+ ENPV+YVQYA+AR  S+ R+  +   +   + 
Sbjct: 406 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYVQYAHARICSVLRKLAEEGVERSRNE 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              ++          E  L   LA+YP +I N+   +EP+ L  YL DLA  FH +++  
Sbjct: 466 CIGDLSLLTL---DEEKDLANQLAKYPELIANSAAQREPHHLTHYLRDLAGQFHTYYNAH 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   +  +   R+ L  A+  +I +GL+++GV +P EM
Sbjct: 523 K-------VLIEDTAVRDARVSLYLAIRQVIANGLDLLGVSAPEEM 561


>gi|157803251|ref|YP_001491800.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166232834|sp|A8EXD2|SYR_RICCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157784514|gb|ABV73015.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 576

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 248/585 (42%), Positives = 365/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I + + IE  +D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIAASRQLYNNQEIANIVTIETSKDNFNGDLSSNIAMIIAAKENMP 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P T+A      +   P + S+ IAG GFIN  +     +  + +I+    ++    I K 
Sbjct: 57  PRTVALKFKEILITLPYIASIEIAGPGFINFTIKAESWQIAIKNILQHEGKFFEIDIDKN 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 KYINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYNVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  VG+ L  +Y ++LL   EE+   IVK+++V+ 
Sbjct: 177 VLLRYREAL-GEKITIPVGLYPGEYLIPVGQILVKEYGNKLLVMDEEERFKIVKNFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL+ L I+HD+F SE   H  D   I +I+  L   G +YEG LP PK K   
Sbjct: 236 MLDLNRKDLEELGIKHDLFFSEQSLH--DKGKIEEIVKLLTNMGLIYEGTLPAPKGKIHA 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           K D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH
Sbjct: 294 KWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G+F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQIKVDVKICQLVNFIENGVPVKMSKRLGNFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A ++ P+  +  F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTVSILSKAMELMPE-SYSSF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              +          E+ +I  LA + + +E +    EP+++A YL +LAS FH  W+ G+
Sbjct: 472 EAGIYDLSLLSSEEEIDIIKLLAAWTKTLEVSAKYFEPHRIALYLINLASKFHSIWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  NN++LT  RL L  A+  +I SG  +IGVE  N+M
Sbjct: 532 ENSDYRFVIENNKELTTARLALAKAIQKVIASGFEVIGVEPMNKM 576


>gi|325291383|ref|YP_004267564.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966784|gb|ADY57563.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 561

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 208/590 (35%), Positives = 322/590 (54%), Gaps = 34/590 (5%)

Query: 1   MYLFADFS----SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L+ +       RLK   +    +  ++   L   VIE PR+  HG L+TN AM+L++ 
Sbjct: 1   MGLYEELKALIYERLKQSAERAKERGDLDFDELPAFVIEEPRERQHGDLATNLAMLLTKI 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               P  IA +I++ +  +        IAG GFIN  L   +L K+L  ++  G  YG  
Sbjct: 61  AKKAPRDIAGVIISHLNTEGTWIKACEIAGPGFINFKLDSGWLGKVLPEVLNKGERYGHV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IGKG K+ +EFVSANPTG +H+G+ R A +GD+LASL++ +GYEV+RE+YINDAG QI+
Sbjct: 121 DIGKGQKIQVEFVSANPTGLLHMGNARGAALGDSLASLLSMAGYEVSREFYINDAGNQIH 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             ALS+  RY Q L   D  LPE  Y G  L    +EL      + L    E     +  
Sbjct: 181 HFALSLEARYLQ-LMGQDVPLPENGYHGEDLIETVRELIKLDGDKYLRTEPELRQEYLVR 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y++   ++ I++ L    + +D++ SE   H  D   I++ +  +  +G++YE       
Sbjct: 240 YALNEKIRNIKETLGKFGVHYDVWFSEQSLH--DSGSIQETMQEMMDKGFIYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  +ST+ GD+ D  +++S+G  TYFAAD+AY K K+ERGF+ +I +
Sbjct: 291 ---------KEGALWLKSTLFGDEKDEVVVRSNGVPTYFAADIAYHKNKFERGFEQVINI 341

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V R++    A+     ++ ++L +LVRL +DG  +KMSKR+G +ITL+ ++D
Sbjct: 342 WGADHHGHVARMKGAMQALGYDPERLQIILMQLVRLIQDGEIVKMSKRSGQYITLQELMD 401

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF  + R     ++FD    K QS +NPV+YVQYA+AR  SI RQA++     
Sbjct: 402 EVGRDAARFFFIMRDPDSTVEFDLDLAKSQSADNPVYYVQYAHARLCSILRQAEEQGFAH 461

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + +    ++          E  L+  LA+ P  I  A    EP++LA Y+ +LA +FH  
Sbjct: 462 EVE---PDIKQISLLASQEECDLLKKLADLPGEIALAARMTEPHRLARYVMELAGLFHSF 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V  ++  L   RL L+ A+  ++ + L I+GV +P  M
Sbjct: 519 YNSHR-------VLVDDADLRTARLALIRAIRQVLANVLTILGVTAPERM 561


>gi|73663421|ref|YP_302202.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|109895041|sp|Q49VF3|SYR_STAS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72495936|dbj|BAE19257.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 555

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 198/587 (33%), Positives = 316/587 (53%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       L   +     K  + E   +  I IE P+D A+G  STN AM+L++    
Sbjct: 1   MNIIDQVKQTLIEEINHSIQKAALAEASDIPDIKIEIPKDDANGDYSTNIAMVLTKIAKR 60

Query: 60  DPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IA+ IV  +       + V IAG GFIN YL  +YL +++S  +    ++G     
Sbjct: 61  NPREIAQAIVDHLDTTAANVEKVQIAGPGFINFYLDNAYLTEVISEAIDKDEKFGSTAEQ 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G  + +E+VSANPTG +H+GH R A VGDTLA+++  +GY VTREYY+NDAG QI  LA
Sbjct: 121 NGKNILLEYVSANPTGDLHIGHARNAAVGDTLANILTAAGYHVTREYYVNDAGNQITNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY +AL ++  ++PEG Y G  + ++GK+LA+K   EL +  E++ +   +   V
Sbjct: 181 RSIEARYFEALGDDSFEMPEGGYHGKDIINIGKDLAEK-QPELKDLSEDERIKTFRKLGV 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M+ +R DL   N   D + SE   +  +   I ++++ ++  GY YE          
Sbjct: 240 DYEMEKLRTDLSDFNTHFDNWFSETSLY--EKGEITEVLNKMSELGYTYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+
Sbjct: 288 ------QDGATWLRTTDFKDDKDRVLIKNDGNYTYFLPDIAYHFDKIKRGNDTLINLFGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ RL+A       +  ++ + + ++VRL +DG  +KMSKR G+ ITLR ++DEVG
Sbjct: 342 DHHGYINRLKASLETFGVESDRLEIQIMQMVRLMQDGQEVKMSKRTGNAITLREIMDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +  R      DFD    K++S++NPV+Y QYA+AR  SI +QA +        
Sbjct: 402 VDAARYFLTMRSPDTHFDFDMELAKQESQDNPVYYAQYAHARICSILKQAAERG------ 455

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           + P          +   + L+  +AE+   I++A   + P+++  Y+ DLAS FH  ++ 
Sbjct: 456 ITPSKDADYTLITNDKAIDLLKKVAEFETTIQSAAANRAPHRITNYIQDLASHFHKFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       V  ++ + T   + L+ AV   + + L+++GV +P  M
Sbjct: 516 EK-------VLTDDVEKTKALIALIDAVRITLRNALSLVGVNAPETM 555


>gi|314932835|ref|ZP_07840204.1| arginine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654516|gb|EFS18269.1| arginine--tRNA ligase [Staphylococcus caprae C87]
          Length = 553

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEIEASIKKAGLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         + IAG GFIN YL   YL +I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++PE  Y G  +  +GK+LA+K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIETRYFEALGDTSHEMPEDGYNGKDIIEIGKDLANKH-PEIKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   N+  D + SE   +  +   I + +  +   GY YE           
Sbjct: 239 YEMDKLKRDLADFNVHFDNWFSETSLY--ENGAIDNTLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGDDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI RQAK+   D+  + 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTN- 459

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   ++  +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 460 -----ANFDTITNEKAIDLLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553


>gi|237735571|ref|ZP_04566052.1| arginyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229381316|gb|EEO31407.1| arginyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 553

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 201/581 (34%), Positives = 328/581 (56%), Gaps = 35/581 (6%)

Query: 7   FSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + LK  LK+       VE+   + I IE P+D +HG  STN AM L++ L  +P  IA
Sbjct: 6   IEATLKGALKQAIIACGFVEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLKRNPRQIA 65

Query: 66  ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E I+  + K + +++ V IAG GFINL+L+   +  I+  ++     YG    G+GTK N
Sbjct: 66  EAIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTYGQGTKYN 125

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTG +H+GH + A VGD++  +M+ +GY+VTREYYINDAG QI+ LALS++ R
Sbjct: 126 VEFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNLALSLYAR 185

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y+QA +  D  +PE  Y G  +  +  ++ +    + L   E K +   ++   +  ++ 
Sbjct: 186 YKQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKGTEYELQK 244

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+D L    +  D++ SE   +  D   +   I+ L   GY YE                
Sbjct: 245 IKDILNEFRVSFDVWFSETSLYEND--RVVPTIEKLKAAGYTYE---------------- 286

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   L F+ST  GDD DR L+KSDGSYTY   D+AY   K +RG++ ++ ++G+DH GY+
Sbjct: 287 EEGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A   A+     Q+N+ + ++VR+  +G P+KMSKR G+ +T++ +++E+G D+ R+
Sbjct: 347 NRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + +  +   DFD    K +S ENPV+Y QYA+AR  SI  +A+    ++D+       
Sbjct: 407 FFVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSI--KAQAAKANIDYSD----- 459

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              +   +  E++L+ H+ E+  VI ++ I + P+K+  Y+  LA +FH  ++       
Sbjct: 460 -KYDLLVNPKEIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFYNECY---- 514

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  +N +L+  RL LV A    + + LN+IGV +P +M
Sbjct: 515 --VIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 553


>gi|319891595|ref|YP_004148470.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161291|gb|ADV04834.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 552

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 199/586 (33%), Positives = 315/586 (53%), Gaps = 35/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +++   +  + + I   I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLIQEIEKSIQQANIVESI-PEIKIEIPKDTKNGDYATNIAMVLTKLAKRN 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+LIV  +  +      + IAG GFIN YL  SYL  ++   +    ++GR    K
Sbjct: 60  PREIAQLIVDHLDTEAAHVKKIDIAGPGFINFYLDSSYLNAVIDQALELDTQFGRVAESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +E+VSANPTG +H+GH R A VGDTL +++  +GY+VTREYYINDAG QI  LA 
Sbjct: 120 NKKILVEYVSANPTGDLHIGHARNAAVGDTLCNILDAAGYDVTREYYINDAGNQITNLAK 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY Q L    +++P   Y G  +K++G +LA K    L++  +++ L   +   V 
Sbjct: 180 SIEARYLQHL-GQKAEMPADGYHGQDIKNIGADLAKK-QPNLMDLSDDERLKTFRQLGVD 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   NI  D + SE   +  +   I+ +++ +   GY YE           
Sbjct: 238 YEMAKLKQDLADFNIHFDNWFSETSLY--EKGEIKAVLERMKENGYTYE----------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K DG+YTYF  D+AY   K++RG DN+I + G+D
Sbjct: 285 -----QDGATWLRTTDFKDDKDRVLIKKDGTYTYFLPDIAYHYDKFQRGNDNLINLFGAD 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL +DG  +KMSKR G+ ITLR ++DEVG 
Sbjct: 340 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLREIMDEVGI 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI RQA+     ++   
Sbjct: 400 DAARYFLTMRSADTHFDFDMALAKEQSQDNPVYYAQYAHARICSILRQAEAQGYQVEKGA 459

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             + +       +   ++L+  +AE+  +IE A  A+ P+++  Y+ DLA+ FH  ++  
Sbjct: 460 DYQTI------TNDKAIELLKKVAEFEPMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAE 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   ++  T   L L+ AV   + + L ++GV +P +M
Sbjct: 514 K-------VLTEDQAKTKAHLALIDAVRITLRNALQLVGVTAPEQM 552


>gi|330685904|gb|EGG97533.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 553

 Score =  568 bits (1464), Expect = e-159,   Method: Composition-based stats.
 Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K K+   I   I IE P+D  +G  STN AM+L++    +
Sbjct: 1   MNIIEQVKQTLVEEIEASIKKAKLANDI-PEIKIEIPKDVKNGDYSTNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G ++G+    K
Sbjct: 60  PREIAQAIVDHLDASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + +E+VSANPTG +H+GH R A VGDTLA+++  +GY VTREYYINDAG QI+ LA 
Sbjct: 120 NKNILLEYVSANPTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL ++  ++PE  Y G  +  +GK+LADK+  E+ ++ +++ L   +   V 
Sbjct: 180 SIETRFFEALGDDSHEMPEDGYNGKDIVEIGKDLADKH-PEIKDYSDDERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   N   D + SE   +  +   I++++  +   GY YE           
Sbjct: 239 YEMSKLKKDLSDFNTHFDNWFSETSLY--EKGEIKEVLAKMNELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D+AY   K +RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QY +AR  SI +QAK+   D+  D+
Sbjct: 401 DAARYFLTMRSPDTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDV 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +AE+   IE+A  ++ P+++  Y+ DLAS FH  ++  
Sbjct: 461 DFSKI------TNEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + LV AV   +N+ L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPESM 553


>gi|116748008|ref|YP_844695.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116697072|gb|ABK16260.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 559

 Score =  568 bits (1464), Expect = e-159,   Method: Composition-based stats.
 Identities = 208/555 (37%), Positives = 324/555 (58%), Gaps = 28/555 (5%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90
           I ++ P+   HG  +TN A+ L+R L  +P  IA  IV  +   D  +  V IAG GFIN
Sbjct: 32  IELDIPKLPEHGDYATNVALALTRRLKRNPREIAGKIVGGLNDPDNLLQKVEIAGPGFIN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  P     IL+ I+     YGR  +G+G +V +EFVSANPTGP+H+GH R A  GD L
Sbjct: 92  FFFHPRAWHGILTDILADPRNYGRLDLGEGHRVQVEFVSANPTGPLHIGHGRGAATGDAL 151

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+++   GY V REYYINDAG Q++TL  S+++RYQ+AL     + P+ +Y G Y+K + 
Sbjct: 152 ANILEACGYAVEREYYINDAGNQMDTLGRSLYFRYQEAL-GEPVEFPDAHYRGEYMKDLA 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           ++         L  P ++ LP+   ++   +++ I+DDL    +  D + SE   H  D 
Sbjct: 211 RDFLRDNGDRYLRAPLDEVLPLFTRFAADRILEGIKDDLGEFGVSFDQWFSERSLHAED- 269

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             IR  +++L R+G++YE                    + F+ST  GD+ DR +++++G 
Sbjct: 270 -AIRRTVEDLNRRGFIYES----------------EGAVWFKSTAFGDEKDRVVIRANGV 312

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAADLAY + KY+RG+D ++ + G+DH GYV+R+ A   A+   +  + ++L +LV 
Sbjct: 313 STYFAADLAYHRNKYDRGYDKVVDIWGADHHGYVERMLAGVEALGRNREDLRIVLVQLVN 372

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G P+ MS RAG+F+TLR VVDEVG D+ RF+ L R++   LDFD    K ++ +NP
Sbjct: 373 LLRAGKPVAMSTRAGEFVTLREVVDEVGKDAARFIFLTRRSDSPLDFDLDVAKARTNDNP 432

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           VFYVQYA+AR  SIF+ A +     D+    +++          ELQ+I  L EYP ++ 
Sbjct: 433 VFYVQYAHARLCSIFQVAAERGLVCDWA-NGKDIPDLGLLTLAQELQIIKFLGEYPAILA 491

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           N + + EP+ + +YL++L S+FH +++  R       V  ++ +LT  RL +  A+  +I
Sbjct: 492 NCSRSMEPHFIPYYLHELVSLFHSYYNQNR-------VIGDDPELTRARLFMAAAIREVI 544

Query: 571 NSGLNIIGVESPNEM 585
            + L ++GV +P +M
Sbjct: 545 RNALELLGVSAPEKM 559


>gi|288942805|ref|YP_003445045.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288898177|gb|ADC64013.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 593

 Score =  568 bits (1464), Expect = e-159,   Method: Composition-based stats.
 Identities = 193/619 (31%), Positives = 308/619 (49%), Gaps = 68/619 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + L   L  +  + ++       I +ER +D AHG  ++N AM+L++P    P  +A
Sbjct: 4   DIKAILSAALDTLIAEGRLTLTERPEIQVERAKDSAHGDFASNLAMLLAKPARAKPRDLA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +V  +   P V  V IAG GFIN +L+    R ++  I+ +G +YGR+ IG G +V +
Sbjct: 64  QQLVDALPASPLVARVEIAGPGFINFFLAEDAYRTLVPRILDAGPDYGRSHIGAGQRVQV 123

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G  +A L+   G++V REYY+NDAG Q++ L  SV+ RY
Sbjct: 124 EFVSANPTGPLHVGHGRGAAYGAVVADLLEAVGFDVHREYYVNDAGRQMDILGTSVWLRY 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226
            + L   +   P   Y G Y+  +   L  ++        E                   
Sbjct: 184 LE-LCGEELRFPSNGYKGDYVWDIAATLHREHGDAYRVEAEQVFAGLPADAPVEGEPQDQ 242

Query: 227 --------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                               +     V +  +  ++  IR+DL    + +  + SE    
Sbjct: 243 TGDKEAHIDGLIAAAKRLLGDNRYRYVFELGLNTILDDIREDLAQFGVTYQEWYSERSL- 301

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             +   +   I+ L   G+VYE                    L FRST  GD+ DR +++
Sbjct: 302 -TESGAVNRAIERLRESGHVYE----------------QNGALWFRSTAFGDEKDRVVVR 344

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            +G  TYFA+D+AY   K ERGFD +I + G+DH GY+ R++A   A+ +   +++VLL 
Sbjct: 345 ENGQSTYFASDIAYHMDKLERGFDRVIDIWGADHHGYIPRVKAALQALGDDADKLDVLLV 404

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +   LYR G   +MS R+G+F+TLR +  EVG D+ RF  + R+  + +DFD    K +S
Sbjct: 405 QFAILYRGGEKAQMSTRSGEFVTLRELRQEVGRDAARFFYVMRRCEQHMDFDLDLAKSES 464

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +NPV+YVQYA+AR  ++ RQA +    ++      N+   E   +  E  L+  L  YP
Sbjct: 465 SDNPVYYVQYAHARICAVLRQAAERGLAVEPSAGTHNL---ERLTEAHEQALLRTLGRYP 521

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +E A +  EP+++  YL +LA+  H +++             ++  L   R++L+ A 
Sbjct: 522 ETVEQAALKAEPHQITHYLRELANDLHTYYNAHPF-------LVDDSALRDARIKLILAT 574

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +GL +IGV +P  M
Sbjct: 575 RQVLRNGLGLIGVSAPETM 593


>gi|296535511|ref|ZP_06897697.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264166|gb|EFH10605.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 594

 Score =  568 bits (1464), Expect = e-159,   Method: Composition-based stats.
 Identities = 268/594 (45%), Positives = 372/594 (62%), Gaps = 22/594 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +FA   + +   L+ +     + ++ L R+ +E PRD +HG +STNAAM++++   L P 
Sbjct: 11  MFAALRAEVLACLRRLLP--DLPEEALARVTVEPPRDASHGDMSTNAAMVVAKIAKLPPP 68

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  + A +   P V     AG GF+NL L+  +L   +++++ +G  YG +  G G +
Sbjct: 69  KLAAELAAALAALPSVAEAAPAGPGFVNLRLAEDFLLGQVATVLRAGEAYGDSQAGGGVR 128

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +G  VT+EYYINDAGAQ+  L  + +
Sbjct: 129 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGAAVTKEYYINDAGAQVQALGYAAY 188

Query: 183 WRYQQALYNN--DSDLPEG-----YYPGVYLKHVGKELADKYSSELL--NFPEEK--WLP 231
           WRY QAL     +    E       Y G YL  VG+ L +K+   L     P E   WL 
Sbjct: 189 WRYLQALGTTLTEEAYAEAVPGGLQYRGDYLVPVGEALKEKFGDSLAPGAVPAEASLWLD 248

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            V++++V AMM+ IR+DL AL + HD+FISE    R         I  L+ +G VYEG+L
Sbjct: 249 TVRNFAVDAMMEAIREDLAALGVAHDVFISEAQLVR--DGVADAAIAALSEKGLVYEGVL 306

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
            PPK KT    +  R Q LF ST  GDDVDRPL KSDGS TYFA D+     K  RG   
Sbjct: 307 EPPKGKTPDDWE-PRPQTLFASTKFGDDVDRPLRKSDGSNTYFANDIGNHADKIARGMQQ 365

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++ V G+DH GYVKR++A   A+S+    ++VLLC++V++ + G P++MSKRAG +ITLR
Sbjct: 366 LVQVWGADHGGYVKRMQAATKALSDGAVPLDVLLCQIVKVMKGGEPVRMSKRAGTYITLR 425

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++DEVG D+VRF ML RK+   ++FD  +V EQS++NPVFYVQYA+ARCRS+ RQA D 
Sbjct: 426 DLIDEVGRDAVRFTMLTRKSDAQMEFDLDRVVEQSRDNPVFYVQYAHARCRSVLRQAGDP 485

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +   D       P  S  D +EL LI  +A +PR++E A  A+EP+++AFYL DLA+ 
Sbjct: 486 AREALAD------APLSSLKDAAELALIRRIAAWPRIVEAAAAAREPHRIAFYLGDLAAD 539

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  W+ GR++  LRF+QA   + T  RL LV A A +I SGL ++GV+   EM
Sbjct: 540 FHILWNRGRDDATLRFIQAEAPEATRARLALVAATAIVIRSGLAVMGVQPVEEM 593


>gi|254479329|ref|ZP_05092667.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214034722|gb|EEB75458.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 555

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 319/582 (54%), Gaps = 32/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    +   L E   +  +  + +  + +E P++  HG L+TN AM+++R   + P  IA
Sbjct: 4   EIKDIVLKALNEAKKEGLLNFESIPDVEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIA 63

Query: 66  ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E+I +++       + V +AG GFIN +L+ ++L + L  I   G +YGR  +GKG KV 
Sbjct: 64  EIITSKMNTSGTFIEKVEVAGPGFINFFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQ 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY V+RE+YINDAG QI     S+  R
Sbjct: 124 VEFVSANPTGPMHMGNARGGAIGDVLASILDYAGYNVSREFYINDAGNQIEKFGYSLEAR 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y Q L   D+++PEG Y G  +    KE  + Y  +  + P E+    + +Y ++  ++ 
Sbjct: 184 YLQLL-GIDAEVPEGGYHGEDIIDRAKEFLEIYGDKYKDVPSEERRKALIEYGLKKNIEK 242

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +++DL    I++D++ SE   +  D   +  +I+ L  +GY YE                
Sbjct: 243 MKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELTEKGYTYE---------------- 284

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
               L F+ T+ G + D  L++S+G  TY A+D+AY K K+  RGFD +I V G+DH G+
Sbjct: 285 KDGALWFKMTLFGAEKDDVLVRSNGIPTYLASDIAYHKNKFVTRGFDWVINVWGADHHGH 344

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           +  ++    A+     +++V+L +LV+L   G  ++MSKR G  ITLR +++EVG D+ R
Sbjct: 345 IAPMKGAMKALGIDPNRLDVVLMQLVKLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAAR 404

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F    R     ++FD    K+Q+ ENPVFYVQYA+AR  SI RQ +++   ++       
Sbjct: 405 FFFNMRSPDSPIEFDLDLAKQQTNENPVFYVQYAHARICSIIRQLEEMGVKIE----NIE 460

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +      +  E+ LI  LA +P  I  A     P+++  Y+ D+AS+FH  ++  R   
Sbjct: 461 DVDLGLLKEEEEVDLIKKLAYFPEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR--- 517

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V+     L   R  L+ AV +++ + L+I+ V +P  M
Sbjct: 518 ----VKGAEENLMKARFALILAVKTVLKNALDILKVTAPERM 555


>gi|292669448|ref|ZP_06602874.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648901|gb|EFF66873.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 552

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 202/586 (34%), Positives = 305/586 (52%), Gaps = 35/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       +   ++    + ++ +   L RI++E P +   G  +TN AM  +R    
Sbjct: 1   MDIKQQIEQAIMRAVEAAKAEGQLPESGALPRILLEEPPEKELGDFATNFAMQSARVFRQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA  I   +  D  +D   IAG GF+NLYL  + L   L +++ +G EYG+    +
Sbjct: 61  PPQKIAAAIKEHLMGD-WLDHAEIAGPGFLNLYLKKTVLADTLRAVLAAGEEYGQLPAQE 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + +E+VSANPTGP+HVGH R A VG  L  L+  +GY V  EYY+NDAG Q+N LA+
Sbjct: 120 AGHIQVEYVSANPTGPLHVGHGRGAAVGSALVKLLRTAGYAVDSEYYVNDAGNQMNLLAV 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY + L    +  PE  Y G  +    + + D+   + L   EE+ L I +D + +
Sbjct: 180 SVNARYLELL-GKPAVFPENGYHGADIVDTAQRIIDRDGDKYLLLSEEERLQIFQDLAYR 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  + +DL    +  D + SE   H   P  +R ++D L  +G  YE           
Sbjct: 239 EKLAALEEDLADFGVTFDRWFSERTLH---PGAVRRVVDVLLERGSAYE----------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    +  RST  GDD DR + + +G  TY AAD+AY   KY RG+  MI + G+D
Sbjct: 285 -----KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHADKYARGYGRMINIWGAD 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++A  AA+ +   ++ VLL ++V LYRDG  +K+SKR G+ +TLR +++EVG 
Sbjct: 340 HHGYVARVKAAIAALGDDPERLTVLLLQMVSLYRDGALVKLSKRTGETVTLRELMEEVGV 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+  L R     LDFD    K+++ ENPV+Y+QYA+AR  SIFRQA +        +
Sbjct: 400 DAARYFFLMRSLDSQLDFDLDLAKKRTNENPVYYIQYAHARISSIFRQADEAG------I 453

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             ++    E   D +E+ LI  +A YP  I  A     P ++A Y ++LA  FH  ++  
Sbjct: 454 AAKDGAELELLTDETEIALIKKIAAYPEEIARAAAELAPQRIARYSHELAGAFHSFYNKC 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       +      L   RL LV A   +I + L ++GV +P +M
Sbjct: 514 R-------IIGQEPALASARLALVSAAGRVIRNSLGVLGVSAPEKM 552


>gi|238650531|ref|YP_002916383.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511656|sp|C4K184|SYR_RICPU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238624629|gb|ACR47335.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 576

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 247/585 (42%), Positives = 365/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNVAMIIAAKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++    Y VT+EYY+NDAG+QIN L  +
Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL     +   IVK ++V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIVKSFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I + +  L R G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G+F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELIPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576


>gi|237785875|ref|YP_002906580.1| arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758787|gb|ACR18037.1| Arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 594

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 184/585 (31%), Positives = 289/585 (49%), Gaps = 40/585 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           + S+ +    + +      +  +L   + +ERPR+  HG  +TN A+ +++ +G  P  +
Sbjct: 45  ELSTLIATRAESVLSHHGKDASVLPLTVTVERPRNPEHGDYATNLALQIAKKVGTSPREL 104

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A  +   +  +  +++V +AG GF+N+ L+ +   +I+  I+  G  +G +       +N
Sbjct: 105 AGWLAEDLATNSAIETVDVAGPGFLNIRLAAAAQGEIVGRILAEGERFGSSSELSDEVIN 164

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD L  + AF G  +TREYY ND G QI+  A S+   
Sbjct: 165 LEFVSANPTGPIHLGGTRWAAVGDALGRIFAFRGASITREYYFNDHGRQIDRFARSLVAA 224

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                       PE  Y G Y++ +   + DK+  E    P E+   + +   V  M   
Sbjct: 225 AL------GQPTPEDGYGGEYIQDIASSVVDKH-PEATQLPLEERQELFRKEGVDLMFAH 277

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+  L       D+F  E+     +   +   I  L   G +YE                
Sbjct: 278 IKRTLHEFGTDFDVFFHENSLF--ESGAVDQAIQKLKDNGNLYEA--------------- 320

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                  RST  GDD DR ++KSDG   Y A D+AY + K ERG +  IY++G+DH GY+
Sbjct: 321 -DGAWWLRSTSFGDDKDRVVIKSDGDAAYIAGDIAYIRDKIERGHNLCIYMLGADHHGYI 379

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A A A+     Q+ VL+ ++V L RDG  +KMSKRAG  ITL  +V+ +G D+ R+
Sbjct: 380 ARLKAAAQALGYDPTQVEVLIGQMVNLVRDGKAVKMSKRAGTVITLDDLVELIGVDAARY 439

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFP 481
            ++     + LD D      Q+ +NPVFYVQYA+AR  S+ R+A+       D D+ L  
Sbjct: 440 ALIRSSVDQTLDIDMDLWARQTNDNPVFYVQYAHARLCSLGRKAQAAGILVKDPDYSLL- 498

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                     +  E  LI  L E+P V+  A   +EP+++A Y+ +LA  FH  +   + 
Sbjct: 499 ---------VNDYEGALIRTLGEFPSVVGTAAELREPHRIARYMEELAGTFHRFYDSCQI 549

Query: 542 NPRLRFVQANNRK-LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P+      +    +   RL L  A    I + L+++GV +P  M
Sbjct: 550 LPKKSEPTGDEAAPIVHARLALAQATRQTIANALSLLGVSAPERM 594


>gi|257056971|ref|YP_003134803.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586843|gb|ACU97976.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 551

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 201/582 (34%), Positives = 307/582 (52%), Gaps = 35/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A  +  +++   +I     ++  IL +++ +ERPR+  HG  +TN A+ +++  GL P  
Sbjct: 4   AALADLVRSSAVQIFTDRGLDLSILPEQVTVERPRNPEHGDYATNLALQVAKKAGLQPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            AE +   I   P + S  +AG GF+NL L+     +I+  ++ +G +YGR     G K+
Sbjct: 64  FAEALAEVISSAPGIASAEVAGPGFLNLRLAADAQGEIVRQVLDAGADYGRGDSLVGQKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+A  G EVTREYYINDAGAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRLLAAQGAEVTREYYINDAGAQIDRFAESLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                        PE  Y G Y+  +  E+  +   E+L+ P+E+     K   V+ M++
Sbjct: 184 AA------EGRPTPEDGYAGAYITDIAAEILRRE-PEVLSLPDEERFATFKRLGVELMLE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++ SE   H      +  I+ +L   G +Y+               
Sbjct: 237 EIKQSLSDFGTHFDVWFSEKSLHT--SGELESILADLKESGSLYQ--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG+  Y A D+AY + K +RGFD  +Y++G+DH GY
Sbjct: 280 -KDGAWWLRSTEHGDDKDRVVIKSDGTLAYIAGDVAYLRNKLDRGFDLCVYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+      + VL+ +LV L   G P++MSKRAG  +T+  +V+ VG D+ R
Sbjct: 339 IARLKAAAAAMGHSPDTVEVLIGQLVNLVSGGKPVRMSKRAGTVVTMEDLVEAVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +        LD D   +++++ ENPVFYVQYA+AR  S+ R A +       +L PR+
Sbjct: 399 YELCRYSVDASLDIDLDLLRKRTNENPVFYVQYAHARLASLQRNAAE------LNLEPRS 452

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E  LI  + E+P V+  A   +EP+++A YL  LAS +H  +   R  P
Sbjct: 453 DADVSLLTHPREGDLIRTIGEFPSVLRTAAELREPHRVARYLESLASAYHKFYDVARVLP 512

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL L  A   ++ +GL+++GV +P  M
Sbjct: 513 QG---DEEPTPLTYARLALCEATRQVLANGLSLLGVSAPERM 551


>gi|315659043|ref|ZP_07911910.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496167|gb|EFU84495.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 555

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 201/587 (34%), Positives = 312/587 (53%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       L N +K  I     ++ + +  I IE P+D  +G  STN AM+L++    
Sbjct: 1   MNIIEQVKQTLINEIKTSIKSAELIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKR 60

Query: 60  DPLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  YG     
Sbjct: 61  NPREIAQAIVDHLDTTKAHVKQVDIAGPGFINFYLDNYYLTAIIPEAISKGAHYGYASEP 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  ++ +E+VSANPTG +H+GH R A VGD+LA+++  +GY+VTREYYINDAG QI  LA
Sbjct: 121 KNKRILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  R+ +AL +    +PE  Y G  +  +GK+LA K+  E+ ++ +   L   +   V
Sbjct: 181 RSIETRFFEALGDTSHKMPEDGYNGKDIIEIGKDLAQKH-PEIKDYSDHDRLKTFRQLGV 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M  ++ DL   N   D + SE   +  D   I + +  +   GY YE          
Sbjct: 240 EYEMVKLKRDLADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R++   DD DR L+KSDGSYTYF  D AY   K  RG D +I +MG+
Sbjct: 288 ------KDGATWLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG
Sbjct: 342 DHHGYINRIKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QA+    D+  D
Sbjct: 402 VDAARYFLTMRSPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +    +       +   + L+  +AE+ +VI+NA   + P++L  Y+ DLA+ FH  ++ 
Sbjct: 462 VDFSLI------TNDKAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       V  ++++ T   + L+ AV   +++ L ++GV +P  M
Sbjct: 516 EK-------VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555


>gi|118579453|ref|YP_900703.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502163|gb|ABK98645.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 563

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 200/587 (34%), Positives = 298/587 (50%), Gaps = 37/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S ++  L+      ++    +  + I  P +  HG  S N AM +++     P  +AE
Sbjct: 6   IASLVETALRAASAAQEITSPSIPAVTIGVPANPDHGDYSCNIAMQMAKAERRAPRQVAE 65

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I   +      +    IAG GFIN ++SP+  +++L  I   G  YGR   G+  KV +
Sbjct: 66  TISRHLGDGKGLLSKTDIAGPGFINFFVSPAAWQRLLPEIESQGATYGRTATGEERKVQV 125

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L+  +G+ VTRE+Y NDAG QI  LALSV  R 
Sbjct: 126 EFVSANPTGPLHIGHGRGAAIGDTICRLLDAAGWNVTREFYYNDAGQQITNLALSVQARC 185

Query: 186 QQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  ND   P   Y G Y++ V      +E  D     +    + + L  +++++V +
Sbjct: 186 L-GIDTNDPRWPADGYQGEYIRDVAAAYLARETVDADDRHVTALGDPQNLDAIREFAVAS 244

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DLKA  +  D+F  E   +  D   + +++  L  +G+ YE            
Sbjct: 245 LRREQDLDLKAFGVHFDVFTLESSLY--DDGRVDNVVRQLVEKGHTYE------------ 290

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T  GDD DR + KSDG YTYF  D+AY   K+ERGF  +I   GSDH
Sbjct: 291 ----QEGALWLRTTEFGDDKDRVMRKSDGGYTYFVPDVAYHLAKWERGFTRVINEQGSDH 346

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR ++DEVG
Sbjct: 347 HSTITRVRAGLQALDRGIPQGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVG 406

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + RK    L FD    KEQS +NPV+YVQYA+AR  SIF  A +    L  D
Sbjct: 407 RDATRFFFIMRKPDSQLVFDIDLAKEQSPDNPVYYVQYAHARICSIFENAVEKGYALPTD 466

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +   ES  +      I  LA  P  ++++    EP++L  YL DLA+ FH  ++ 
Sbjct: 467 AGSVRLELLESTEELQL---IKLLAALPNTVDDSARFFEPHRLTNYLTDLAASFHSFYNR 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   N  LT  RL L+   A  +N+ L+I+G+ +P  M
Sbjct: 524 NR-------VLTENSDLTGARLYLLKRTAQTLNNALSILGISAPERM 563


>gi|254821291|ref|ZP_05226292.1| arginyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 550

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 192/582 (32%), Positives = 290/582 (49%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LKN    +  +  ++  +L   + +ERPR+  HG  ++N AM L + +G +P  
Sbjct: 4   ADLAELLKNTAAAVLAERGLDAAMLPATVTVERPRNPEHGDYASNLAMQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     V S  +AG GFINL L  S    ++++++  G  YG +    G  +
Sbjct: 64  LAGWLAEALAQADGVASAEVAGPGFINLRLEASAQAVVVNNVIDGGARYGHSDALAGHHI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAVVVREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K     L+ P  +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGAYINDIAAQIVQKAPDA-LSLPAPEMHETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      + + +  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDAMHT--SGRVDEALAKLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRASAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA+ E  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAALGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D       
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGLIADTGNLGL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E  L+  L E+PRV+  A+  +EP+++  YL DLA  +H  +   R  P
Sbjct: 458 ------LDHDKEGTLLRTLGEFPRVLTTASSLREPHRICRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550


>gi|315443349|ref|YP_004076228.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315261652|gb|ADT98393.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 550

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 193/582 (33%), Positives = 298/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L D + +ERPR+  HG  +TN A+ L + +G +P  
Sbjct: 4   ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + +  +AG GF+NL +  S    ++S+++ +G +YG + +  G KV
Sbjct: 64  LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K    +L+ P+++     +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGTYIADIASQVVAKE-PGVLDQPDDRMRETFRAIGVNMMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   ID L   G+ YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVEQAIDKLRETGFAYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG   Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D       
Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAELGIAPD------- 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +      E  LI ++ E+PR++  A   +EP++++ YL DLA  +H  +   R  P
Sbjct: 452 TAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDACRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL+I+GV +P  M
Sbjct: 512 QG---DEAPGDLHAARLALCAATRQVIANGLDILGVSAPERM 550


>gi|34580946|ref|ZP_00142426.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262331|gb|EAA25835.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 576

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 247/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++    Y VT+EYY+NDAG+QIN L  +
Sbjct: 117 KNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL     +   I+K ++V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I + +  L R G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +AK++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576


>gi|114567927|ref|YP_755081.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317211|sp|Q0AU94|SYR_SYNWW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114338862|gb|ABI69710.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 559

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 202/590 (34%), Positives = 323/590 (54%), Gaps = 36/590 (6%)

Query: 1   MY----LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M     + A   S +   L++   +  ++   +   +IE PR+  HG  + N A++++R 
Sbjct: 1   MNPIQKVLASLHSMVIEALEKAKSRDLIKFDQIPEFLIEVPREKEHGDFACNVALLMARQ 60

Query: 57  LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               P  IAE++V  ++      + + IAG GFIN +L  S+L +I   +  S  +YG N
Sbjct: 61  ARQAPRAIAEVLVELMEASGRPVEKIEIAGAGFINFFLDRSWLYEIPLMVYKSKDKYGFN 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              K  KV +EFVSANPTG +H+G+ R   +GDTLA+++  +GYEV RE+YINDAG QI 
Sbjct: 121 GE-KAKKVQVEFVSANPTGNLHMGNARGGAIGDTLANILERAGYEVEREFYINDAGNQIE 179

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY Q L  +D   PE  Y G  L    + +  +Y   L + P E+   I+ D
Sbjct: 180 IFTDSMEARYLQ-LTGHDVQFPENGYAGRDLIDTVRNIIARYGEGLYDLPREERRQIIVD 238

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  +  I+  L +  I +D++ SE   H  +   I  + ++L  +GY+YE       
Sbjct: 239 FALEEKIDYIQKTLASFGINYDVWFSEKSLH--ENGKIMAVFNDLRDKGYIYES------ 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                          F+ST  GD+ D  +L+++G  TYF AD+AY + K+ERGFD +I V
Sbjct: 291 ----------EGAWWFKSTAFGDEKDEVVLRANGMPTYFMADIAYHQNKFERGFDWVINV 340

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V R++    A+    A++++LL +LVRLYR G  ++MSKR G  ++L  +++
Sbjct: 341 WGADHHGHVARMKGAIEALGYDPARLDILLMQLVRLYRGGNIVRMSKRTGTTVSLDELIE 400

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           +VG D+ RF  + R     LDFD    +++S+ENPV+YVQYA+AR  SIFRQA+      
Sbjct: 401 DVGKDAARFFFVMRSPDSHLDFDLELARQKSQENPVYYVQYAHARICSIFRQARAEG--- 457

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              +   N I      +  EL ++  +A++P  I  A     P+++A Y+ DLA++FH  
Sbjct: 458 -ITMAEINEIDISCLKEEEELAILRKIADFPEEISIAARTLAPHRIARYVLDLAALFHSF 516

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H R       V  +NR L   RL L+      I++ L+++GV +P +M
Sbjct: 517 YNHHR-------VLNDNRALQDARLLLMEITRITIHNALDVLGVAAPEQM 559


>gi|15892018|ref|NP_359732.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|21542254|sp|Q92JH2|SYR_RICCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15619134|gb|AAL02633.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 576

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 247/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++    Y VT+EYY+NDAG+QIN L  +
Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL     +   I+K ++V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I + +  L R G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +AK++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576


>gi|229586306|ref|YP_002844807.1| arginyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511655|sp|C3PMA4|SYR_RICAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|228021356|gb|ACP53064.1| Arginyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 576

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 246/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R A+ GD LA ++    Y VT+EYY+NDAG+QIN L  +
Sbjct: 117 KNINIEYVSANPTGPMHIGHARGAIYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL     +   I+K ++V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I + +  L R G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +AK++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576


>gi|329723123|gb|EGG59655.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 553

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEIEASIRKANLTEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  +G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I++ +  +   GY YE           
Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553


>gi|38233629|ref|NP_939396.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401545|sp|Q6NHU6|SYR_CORDI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|38199889|emb|CAE49555.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 550

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 186/583 (31%), Positives = 307/583 (52%), Gaps = 38/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  +K    ++    +++  +L   +V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   ADLSQLIKQTAIDVLSARELDTTVLPETVVVERPRNPEHGDYATNVALQIAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + +++   +  +  +D   IAG GFIN+ L+ +   +I++ I+ +G  +G + + +G +V
Sbjct: 64  LGQVLADSLAANTAIDEASIAGPGFINIRLAAAAQGEIVAKILEAGATFGHSDLYQGRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGRQIDRFTNSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K +   +  ++   +L   E       +   V+ M  
Sbjct: 184 SAK------GEPTPEDGYGGDYIKEIADAVVAQHPD-VLALAEADLNERFRATGVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  E+     +   +   I  L   G +Y                
Sbjct: 237 HIKESLHEFGTDFDVYFHENSLF--ESGAVDKAIQTLKDNGNLYFN-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +S+  GDD DR ++KSDG   Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --EGAWWLKSSEYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+  + + + VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D  R
Sbjct: 339 ISRLRAAAAAMGYEPSNVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGIDGAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPR 482
           + M+       LD D    ++QS +NPV+YVQY +AR  SI R+A D+    +D DL   
Sbjct: 399 YSMIRSSVDSSLDIDLQLWEQQSSDNPVYYVQYGHARLCSIARKAADLGITAIDPDL--- 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++  + E D     LI  L E+P V++ A   +EP+++A +  DLA  FH  +   +  
Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAAELREPHRIARFAEDLAGTFHRFYDSCQIL 510

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+   V  +   +   RL L +A   ++ + L ++GV +P  M
Sbjct: 511 PK---VGESAEPIHTARLALANATRQVLANALRLVGVSAPERM 550


>gi|238927166|ref|ZP_04658926.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884948|gb|EEQ48586.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 589

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 204/584 (34%), Positives = 296/584 (50%), Gaps = 35/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +       L N +K      ++ E   L  I++E P +   G  +TN AM  +R     P
Sbjct: 40  IKQQIEQALINAVKAAVSAGELSEGGTLPPILLEEPPNKELGDFATNFAMQSARIFHQPP 99

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IAE++   I     +D   +AG GF+N YL    +   L  I+ +G  YG        
Sbjct: 100 KKIAEILGTHI-TGSWLDHAEVAGPGFLNFYLKKDVIADTLRDILRTGENYGALPPKDLP 158

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +E+VSANPTGP+HVGH R A VG  L  L+  +GYEV  EYY+NDAG Q++ LA+SV
Sbjct: 159 PIQVEYVSANPTGPLHVGHGRGAAVGSALVKLLRTAGYEVQSEYYVNDAGKQMDLLAISV 218

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY + L       PE  Y G  +    + + D+     L   EE+ L   KD + +  
Sbjct: 219 NARYLERLGQKIV-FPENGYHGADIIDTAQRIIDRDGDRYLALSEEERLEKFKDIAYKEK 277

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + ++R+DL    +  D + SE   H   P  ++ ++D L  +G  YE             
Sbjct: 278 LAVLREDLADFRVTFDRWFSERTLH---PEAVQRVVDVLLERGTAYE------------- 321

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +  RST  GDD DR + + +G  TY AAD+AY   KY RGF  ++ + G+DH 
Sbjct: 322 ---KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGADHH 378

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV R++A   A+     Q+ VLL ++V LYRDG  +K+SKR G+ +TLR +++EVG D+
Sbjct: 379 GYVARVKAAMEALGHDSKQLTVLLLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGVDA 438

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+  L R     LDFD    K++S ENPV+Y+QYA+AR  SIFRQA ++  D      P
Sbjct: 439 ARYFFLMRSLDSQLDFDLDLAKKKSNENPVYYIQYAHARISSIFRQAAEMRID------P 492

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                 +   D +E+ LI  L  YP  IE A     P ++A Y ++LA+ FH  ++  R 
Sbjct: 493 AEGEKLDVLTDETEIALIKKLGAYPEEIERAASELAPQRIARYSHELAAAFHSFYNKCR- 551

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +      L   RL LV A   +I   L I+GV +P +M
Sbjct: 552 ------IVGQEPVLAAARLSLVLATGHVIRHSLGILGVSAPEKM 589


>gi|239636782|ref|ZP_04677784.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239598137|gb|EEQ80632.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 553

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K ++   I   I IE P+D  +G  STN AM+L++    +
Sbjct: 1   MNIIEQVKQTLVEEIEASIKKAELANDI-PEIKIEIPKDVKNGDYSTNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G ++G+    K
Sbjct: 60  PREIAQAIVDHLDASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEASK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + +E+VSANPTG +H+GH R A VGDTLA+++  +GY VTREYYINDAG QI+ LA 
Sbjct: 120 NKNILLEYVSANPTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N  ++PE  Y G  +  +GK+LADK+  E+ ++ +++ L   +   V 
Sbjct: 180 SIETRFFEALGDNSYEMPEDGYNGKDIVEIGKDLADKH-PEIKDYSDDERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   N   D + SE   +  +   I++++  +   GY YE           
Sbjct: 239 YEMSKLKKDLSDFNTHFDNWFSETSLY--EKGEIKEVLAKMNDLGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D+AY   K +RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QY +AR  SI +QAK+   D+  D+
Sbjct: 401 DAARYFLTMRSPDTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDV 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +AE+   IE+A  ++ P+++  Y+ DLAS FH  ++  
Sbjct: 461 DFSKI------TNEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + LV AV   +N+ L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPETM 553


>gi|260886946|ref|ZP_05898209.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330839265|ref|YP_004413845.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260863008|gb|EEX77508.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329747029|gb|AEC00386.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 551

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 205/585 (35%), Positives = 303/585 (51%), Gaps = 34/585 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S+ ++   ++           L  I++E P D   G  +TN AM  +R   ++
Sbjct: 1   MDIKEQLSAAIRQAAEQAIADGVFPAGELADILLEVPPDKKFGDFATNFAMQSARVFRMN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +V+RI+ D  +D   IAG GFIN YL  + L  +L  I   G           
Sbjct: 61  PKKIAEELVSRIEGD-WLDHAEIAGPGFINFYLKGNVLYDLLRHIYEGGEACFNLPQKDT 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +E+VSANPTG +HVGH R A VG  L +L+  +GY V  EYYINDAG QI+ LA S
Sbjct: 120 ARIMVEYVSANPTGLLHVGHGRGAAVGSALVNLLRAAGYPVHSEYYINDAGNQIDNLAAS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY + L   ++  PE  Y G  +    K + +    + L+  EE+ L   K+ +++ 
Sbjct: 180 VNARYLELL-GKETAFPENGYHGADIIDTAKRIVEADGEKYLSLSEEQRLAAFKEIALKE 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +++DL A N+  D + SE   H   P  +RD    L  +G VY+            
Sbjct: 239 KLAQLKEDLAAFNVTFDEWFSERTLH---PEAVRDACQTLKEKGKVYD------------ 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  RST  GDD DR +++ +G  TY AAD+AY + K ERGF ++I + G+DH
Sbjct: 284 ----KDGALWLRSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKLERGFGHLINIWGADH 339

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYV R++A  AA+     Q+ VLL ++V LYR G  +KMSKR G+ +TL  +++EVG+D
Sbjct: 340 HGYVCRVKAALAALGYAPEQLEVLLLQMVSLYRGGELVKMSKRTGESVTLEELIEEVGTD 399

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  L R     LDFD    K  S ENPV+Y+QYA+AR  SIFRQA D   +      
Sbjct: 400 AARYFFLMRSLDSQLDFDLDLAKSHSNENPVYYIQYAHARISSIFRQAADAGIE------ 453

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      D +E+ LI  + EY   IE A   + P+++A + YD A +FH  ++  R
Sbjct: 454 TGGAPEFSRLIDETEIALIKKIEEYAEEIERAARERAPHRIARFAYDTAGLFHSFYNKCR 513

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +      L+  RL LV    +++   L I+G+ +P +M
Sbjct: 514 -------IVGVEPALSGARLALVAVARNVLRHALGILGISAPEKM 551


>gi|145222884|ref|YP_001133562.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189083540|sp|A4T8M4|SYR_MYCGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145215370|gb|ABP44774.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 550

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 193/582 (33%), Positives = 298/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L D + +ERPR+  HG  +TN A+ L + +G +P  
Sbjct: 4   ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + +  +AG GF+NL +  S    ++S+++ +G +YG + +  G KV
Sbjct: 64  LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K    +L+ P+++     +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGTYIADIASQVVAKE-PGVLDQPDDRMRETFRAIGVNLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   ID L   G+ YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVEQAIDKLRETGFAYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG   Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D       
Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAELGIAPD------- 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +      E  LI ++ E+PR++  A   +EP++++ YL DLA  +H  +   R  P
Sbjct: 452 TAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDACRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL+I+GV +P  M
Sbjct: 512 QG---DEAPGDLHAARLALCAATRQVIANGLDILGVSAPERM 550


>gi|20808887|ref|NP_624058.1| arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|23822189|sp|Q8R786|SYR_THETN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|20517545|gb|AAM25662.1| Arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 562

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 319/582 (54%), Gaps = 32/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    +   L E   +  +  + +  + +E P++  HG L+TN AM+++R   + P  IA
Sbjct: 11  EIKDVVLKALNEAKKEGLLNFESIQDVEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIA 70

Query: 66  ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E+I +++       + V +AG GFIN +L+ ++L + L  I   G +YGR  +GKG KV 
Sbjct: 71  EIIASKMNTSGTFIEKVEVAGPGFINFFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQ 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY V+RE+YINDAG QI     S+  R
Sbjct: 131 VEFVSANPTGPMHMGNARGGAIGDVLASILDYAGYNVSREFYINDAGNQIEKFGYSLEAR 190

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y Q L   D+++PEG Y G  +    KE  + +  +  + P E+    + +Y ++  ++ 
Sbjct: 191 YLQLL-GIDAEVPEGGYHGEDIIDRAKEFLEIHGDKYKDVPSEERRKALIEYGLKKNIEK 249

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +++DL    I++D++ SE   +  D   +  +I+ L  +GY YE                
Sbjct: 250 MKEDLVLYGIEYDVWFSEQSLY--DSGEVYKVIEELTEKGYTYE---------------- 291

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
               L F+ T+ G + D  L++S+G  TY A+D+AY K K+  RGFD +I V G+DH G+
Sbjct: 292 KDGALWFKMTLFGAEKDDVLVRSNGVPTYLASDIAYHKNKFVTRGFDWVINVWGADHHGH 351

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V  ++    A+     +++V+L +LV+L   G  ++MSKR G  ITLR +++EVG D+ R
Sbjct: 352 VAPMKGAMKALGIDPNRLDVVLMQLVKLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAAR 411

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F    R     ++FD    K+Q+ ENPVFYVQYA+AR  SI RQ +++   ++       
Sbjct: 412 FFFNMRSPDSPIEFDLDLAKQQTNENPVFYVQYAHARICSIIRQLEEMGVKIE----NIE 467

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +      +  E+ LI  LA +P  I  A     P+++  Y+ D+AS+FH  ++  R   
Sbjct: 468 DVDLGLLKEEEEVDLIKKLAYFPEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR--- 524

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V+     L   R  L+ AV +++ + L+I+ V +P  M
Sbjct: 525 ----VKGAEENLMKARFALILAVKTVLKNALDILKVTAPERM 562


>gi|323465238|gb|ADX77391.1| arginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 552

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 199/586 (33%), Positives = 314/586 (53%), Gaps = 35/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +++   +  + + I   I IE P+D  +G  +TN AM+L++     
Sbjct: 1   MNIIDQVKQTLIQEIEKSIQQANIVESI-PEIKIEIPKDTKNGDYATNIAMVLTKLAKRT 59

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+LIV  +  +      + IAG GFIN YL  SYL  ++   +    ++GR    K
Sbjct: 60  PREIAQLIVDHLDTEAAHVKKIDIAGPGFINFYLDSSYLNAVIDQALELDTQFGRVAESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +E+VSANPTG +H+GH R A VGDTL +++  +GY+VTREYYINDAG QI  LA 
Sbjct: 120 NKKILVEYVSANPTGDLHIGHARNAAVGDTLCNILDAAGYDVTREYYINDAGNQITNLAK 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY Q L    +++P   Y G  +K++G +LA K    L++  +++ L   +   V 
Sbjct: 180 SIEARYLQHL-GQKAEMPADGYHGQDIKNIGADLAKK-QPNLMDLSDDERLKTFRQLGVD 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   NI  D + SE   +  +   I+ +++ +   GY YE           
Sbjct: 238 YEMAKLKQDLADFNIHFDNWFSETSLY--EKGEIKAVLERMKENGYTYE----------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K DG+YTYF  D+AY   K++RG DN+I + G+D
Sbjct: 285 -----QDGATWLRTTDFKDDKDRVLIKKDGTYTYFLPDIAYHYDKFQRGNDNLINLFGAD 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL +DG  +KMSKR G+ ITLR ++DEVG 
Sbjct: 340 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLREIMDEVGI 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI RQA+     ++   
Sbjct: 400 DAARYFLTMRSADTHFDFDMALAKEQSQDNPVYYAQYAHARICSILRQAEAQGYQVEKGA 459

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             + +       +   ++L+  +AE+  +IE A  A+ P+++  Y+ DLA+ FH  ++  
Sbjct: 460 DYQTI------TNDKAIELLKKVAEFEPMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAE 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   ++  T   L L+ AV   + + L ++GV +P +M
Sbjct: 514 K-------VLTEDQAKTKAHLALIDAVRITLRNALQLVGVTAPEQM 552


>gi|329734087|gb|EGG70406.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 553

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEIEASIRKANLTEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  +G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I++ +  +   GY YE           
Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSEFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553


>gi|118468738|ref|YP_889211.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|152031699|sp|Q9X5M0|SYR_MYCS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118170025|gb|ABK70921.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 550

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 193/582 (33%), Positives = 292/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L   + +ERPR+  HG  +TN A+ L + +G++P  
Sbjct: 4   ADLAELLKATAAAVLTEHDLDVAALPATVTVERPRNPEHGDYATNLALQLGKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +    +AG GF+NL +  S    I+++++ +   YG +    G  V
Sbjct: 64  LAGWLATALTAADGIAVAEVAGPGFVNLRIEASAQGVIITNVLAAEGSYGSSDQYAGRNV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+A  G  VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLATQGAAVTREYYFNDHGAQIDRFVNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  + +++  K    +L  PE++     +   V  M  
Sbjct: 184 SAK------GEPTPEDGYAGDYIVDIAQQVIAKAPD-VLGLPEDQQRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKQSLHDFGTDFDVYTHEDSMHT--SGRVDQAITQLREAGSIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG+  Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGNAAYIAGDLAYYLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A D+   ++ D     
Sbjct: 399 YALIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLCALARNAADLGVSVNTDHLDL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E  LI +L E+PRV++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 458 ------LTHEKEGALIRNLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEEPGDLHSARLALCRATRQVIANGLAILGVSAPERM 550


>gi|307546356|ref|YP_003898835.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218380|emb|CBV43650.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 561

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 204/586 (34%), Positives = 314/586 (53%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  L+++  +  +  ++   I ++  +D AHG  +TN A++L++P GL P  +AE
Sbjct: 5   IISLLERALEDLQRQAILPSELAPTIKVDPAKDKAHGDYATNLALMLAKPAGLKPRELAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +     V  V IAG GFIN + +     +++  ++  G  +GR+L G+G KV +E
Sbjct: 65  KLVAALPDSEAVSKVEIAGPGFINFFAATDAAAQVVREVLDGGDAFGRSLTGQGQKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD L  L+  +G++VTRE+Y NDAGAQI+ LALSV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEATGFDVTREFYYNDAGAQISNLALSVQAR-A 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + +   D   P   Y G Y+  V K     E        +    +   L  ++D++V  +
Sbjct: 184 KGVTPEDDAWPADGYRGDYITDVAKAYLAGETVHADDRHVTAKADPDDLDAIRDFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DL+A  +  D++  E   +R     + D    LA QG+ YE             
Sbjct: 244 RREQDLDLRAFGVAFDVYFLESSLYR--DGKVADTAKRLAEQGHTYEH------------ 289

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     R+T  GDD DR + K DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 290 ----DGATWLRTTDFGDDKDRVMRKRDGDYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +   + +L ++V + R G+ +K+SKRAG ++TLR ++DEVG 
Sbjct: 346 STVTRVRAGLQALGVGIPEGWPDYVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R+    L FD    + QS +NPV+YVQYA+AR  S+ R+A+      D +L
Sbjct: 406 DATRFFLAARRADSQLTFDIDLARSQSNDNPVYYVQYAHARVCSMLRKAQADERPFDHEL 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              N+   ++E    E  L+  LA YP V+E A +A+EP ++A YL DLA+ FH  ++  
Sbjct: 466 AMDNLALLDTE---QEKALLNRLARYPEVVERAALAREPQQIAQYLQDLAAEFHTCYNAV 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   +      RL L  A   ++ +GL+++GV +P EM
Sbjct: 523 K-------VMVEDDARRNARLALGLAARQVLRNGLDLLGVSAPEEM 561


>gi|289551531|ref|YP_003472435.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181062|gb|ADC88307.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 555

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 201/587 (34%), Positives = 310/587 (52%), Gaps = 34/587 (5%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       L N +K  I     ++ + +  I IE P+D  +G  STN AM+L++    
Sbjct: 1   MNIIEQVKQTLINEIKTSIKSAKLIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKR 60

Query: 60  DPLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IA+ IV            V IAG GFIN YL   YL  I+   +  G  YG     
Sbjct: 61  NPREIAQAIVDHFDTTKAHVKQVDIAGPGFINFYLDNHYLTAIIPEAISKGAHYGYASEP 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  ++ +E+VSANPTG +H+GH R A VGD+LA+++  +GY+VTREYYINDAG QI  LA
Sbjct: 121 KNKRILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  R+ +AL +    +PE  Y G  +  +GK+LA K+  E+ ++ +   L   +   V
Sbjct: 181 RSIETRFFEALGDTSHKMPEDGYNGKDIIEIGKDLAQKH-PEIKDYSDHDRLKTFRQLGV 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  M  ++ DL   N   D + SE   +  D   I + +  +   GY YE          
Sbjct: 240 EYEMVKLKRDLADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R++   DD DR L+KSDGSYTYF  D AY   K  RG D +I +MG+
Sbjct: 288 ------KDGATWLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG
Sbjct: 342 DHHGYINRIKASLETFGVNSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QA+    D+  D
Sbjct: 402 VDAARYFLTMRSPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTD 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +       +   + L+  +AE+ +VI+NA   + P++L  Y+ DLA+ FH  ++ 
Sbjct: 462 ADFSLI------TNDKAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNA 515

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       V  ++++ T   + L+ AV   +++ L ++GV +P  M
Sbjct: 516 EK-------VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555


>gi|226360614|ref|YP_002778392.1| arginyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254782979|sp|C1AW17|SYR_RHOOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226239099|dbj|BAH49447.1| arginyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 550

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 187/582 (32%), Positives = 301/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L   + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAAKVLAERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +DS  IAG GF+N+ L+      I++ I+ +G  +G      G K+
Sbjct: 64  LAGWLADALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILEAGAAFGAGHTLDGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  +   ++L+ P  +   + +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAAQVQQQ-RPDVLDLPAGEQQEVFRSIGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +++               
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L RDG+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + M+       +D D         ENPV+YVQYA+AR  +I R A D+   +    F   
Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVTDPDFSLL 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +  QE +       LI  L EYPRV+ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 459 IAEQEGD-------LIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L + RL L  A   ++ +GL ++GV +P +M
Sbjct: 512 QG---DEEVGPLHIARLALCDASRQVLANGLALLGVSAPEQM 550


>gi|225630185|ref|YP_002726976.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|225592166|gb|ACN95185.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 568

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 260/586 (44%), Positives = 368/586 (62%), Gaps = 18/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + I +E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKRASSLILSKLNELKQRGIINTDTTNFI-VEPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL      + +G YPG YLK +G+ LA KY  E L   + +   I+++Y++  
Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++D+  L + HD+F SE +  +     I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K  GS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 294 NWT-SRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D
Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 473 RTGG----------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            +  +RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EMS
Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 568


>gi|317052384|ref|YP_004113500.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947468|gb|ADU66944.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 556

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 204/584 (34%), Positives = 327/584 (55%), Gaps = 37/584 (6%)

Query: 7   FSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            +  ++N +++   +  +   E + L  I+IE P++ + G  +   AM L++ +G  P  
Sbjct: 5   IAECVRNAIEQAIQRGTLSLPEGQGLPEIIIENPKEKSFGDFACTIAMPLAKIMGQPPRA 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ I+A +     ++ V IAG GF+N ++ P+   ++L +I+  G +YGR+ +G+  +V
Sbjct: 65  IAQAIMAHL-SHSAIEKVEIAGPGFMNFFVRPAASLEVLKTILREGEQYGRSAVGQNRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+H+GH R A VGD +A ++ ++GY V REYYINDAG Q+N L LS + 
Sbjct: 124 MVEFVSANPTGPLHIGHGRGAAVGDAIARILEYAGYNVHREYYINDAGNQMNNLGLSTYI 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY Q L + +  L E  Y G Y+  + +++  KY  +     +   +P     +   +++
Sbjct: 184 RYMQLLGHEEMTLEESCYQGDYITDIARDVLTKYGRKF--EGDRSSIPFFTTLTGDVILQ 241

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+DDL+   +  D + SE D H  +   +   +D L   G  YE               
Sbjct: 242 GIKDDLQRFRVSFDHYFSEKDLH--EQGHVSRELDQLQTAGKAYE--------------- 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +   L  R+T  GDD DR + + +G  TYFAAD+AY + K++RGFD +I + G+DH GY
Sbjct: 285 -EGDALWVRTTAFGDDKDRVVRRGNGETTYFAADIAYHRNKFQRGFDTLIDIWGADHHGY 343

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A    +      + V+L +LV L R G+P+ MS R+G+F  LR V+DEVG+D+ R
Sbjct: 344 VNRLKAAVNLLDRNPDDLEVILIQLVSLQRAGVPVAMSTRSGEFDALRDVLDEVGTDAAR 403

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFP 481
           +  L R+    LDFD    K+Q+ +NPVFYVQY +ARC SI    +A D +P  + D   
Sbjct: 404 YFFLMRRCDSHLDFDLELAKQQTNDNPVFYVQYCHARCCSIIEQLKANDKYPQQNLDAID 463

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +V+  E      E  L   L  +  V+E A +A+EP+++  YL ++AS FH  ++    
Sbjct: 464 FSVMDTEQ-----EKDLAKVLGRFTEVVEGAALAREPHRIPHYLNEVASAFHSFYN---- 514

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R + A  ++L   R  +V A   I+ +GL++IG+++P  M
Sbjct: 515 --VCRVMNAPTQELLTARTIMVEATRQIVCNGLHVIGIDAPQRM 556


>gi|27467298|ref|NP_763935.1| arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251810035|ref|ZP_04824508.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282874930|ref|ZP_06283805.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|38258364|sp|Q8CTN9|SYR_STAES RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|27314841|gb|AAO03977.1|AE016745_76 arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251806379|gb|EES59036.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296258|gb|EFA88777.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 553

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEIEASIRKANLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  +G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I++ +  +   GY YE           
Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553


>gi|92112735|ref|YP_572663.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123265793|sp|Q1QZZ4|SYR_CHRSD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91795825|gb|ABE57964.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 561

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 201/586 (34%), Positives = 312/586 (53%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+    ++  +  +       + +E  +D AHG  ++N A+ L++P G  P  +AE
Sbjct: 5   IIELLEAAGTQLKQQGILPADAPLTVKVEPTKDKAHGDYASNLALTLAKPAGRKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +     +  V IAG GFIN + +     +++ +I+ +G  +GR+L G G KV +E
Sbjct: 65  ALVAALPPSDAIRQVDIAGPGFINFFAATDAAAQVVPAILDAGDTFGRSLSGAGEKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD L  L+  +G+EVTRE+Y NDAGAQI  LALSV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEATGFEVTREFYYNDAGAQIQNLALSVQAR-V 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           Q L  +D+  PE  Y G Y+  V +     E       ++        L  ++D++V  +
Sbjct: 184 QGLTPDDAAWPEDGYRGAYINDVAQAYLAGETVVADDRDVTASAAPDDLDAIRDFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  +  D++  E   +  D   +   +  L   G+ YE             
Sbjct: 244 RREQDLDLKAFGVAFDVYFLESSLY--DDGKVDATVKALVEGGHTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              +      R+T  GDD DR + K DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 289 ---EDGATWLRTTDFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +   + +L ++V + R G+ +K+SKRAG ++TLR ++DEVG 
Sbjct: 346 STVTRVRAGLQALEAGIPQGWPDYVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R++   L FD    + QS +NPV+Y+QYA+AR  S+ R+A+D     D DL
Sbjct: 406 DATRFFLAARRSDSQLTFDIDLARSQSNDNPVYYIQYAHARVCSVMRRAQDAGKAFDRDL 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +++   ++     E +L+  LA YP V+E A   +EP ++A YL DLA+ FH  ++  
Sbjct: 466 AMQHLGRLDA---PQEKELMNRLARYPEVVERAARMREPQQVAQYLMDLAADFHTCYNAV 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   + +L   RL L  A   +I +GL+++GV +P EM
Sbjct: 523 K-------VMVEDDELRNARLALGLATRQVIRNGLDLMGVSAPEEM 561


>gi|15603944|ref|NP_220459.1| arginyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226193|sp|Q9ZE81|SYR_RICPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3860635|emb|CAA14536.1| ARGINYL-TRNA SYNTHETASE (argS) [Rickettsia prowazekii]
 gi|292571662|gb|ADE29577.1| Arginyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 576

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 245/585 (41%), Positives = 362/585 (61%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     K+   K+I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIAASQKLYNNKEIANTATIETPKDSFNGDLSSNIAMIIASKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKN 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 SNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ L+ +Y ++LL   + +   I+K ++V+ 
Sbjct: 177 VLLRYKEAL-GEPITIPVGLYPGEYLIPLGEILSKEYGNKLLTMNDVERFKIIKSFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HD+F SE   +  D   I   +  L R G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDVFFSEQSLY--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +  R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH
Sbjct: 294 DWEY-RVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ ++K +++V +C+LV    +G+PIKMSKR G F +++ V  EVG D
Sbjct: 353 SGYVKRIEAIVKALGQEKVKVDVKICQLVNFVENGVPIKMSKRLGSFASVQDVNKEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R +SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTKSILSKARELMPEA-YNSF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 KEGKYNLSLLSSEEEIEIIKLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RF+  NN++LT+ RL L   +  II SGL +IGVE    M
Sbjct: 532 ENSDYRFIIENNKELTLARLALASVIQKIIASGLEVIGVEPMVTM 576


>gi|296170233|ref|ZP_06851826.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295895109|gb|EFG74827.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 550

 Score =  564 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 293/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +  +  ++   L   + +ERPR+  HG  ++N A+ L + +G++P  
Sbjct: 4   ADLAELLRTTASAVLAEHSLDAAALPATVTVERPRNPEHGDYASNLALQLGKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     V S  +AG GFINL L  S   KI++++V +G  +G +    G K+
Sbjct: 64  LAGWLAAAVSQADGVASAEVAGPGFINLRLEASAQAKIVNAVVDAGDGFGHSDALAGHKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVEREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K     L+ PE +     +   V  M  
Sbjct: 184 AAK------GEATPEDGYAGAYINDIAAQVLAKAPDA-LSLPEAEMRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGASWLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA  +  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAAFGDDPAHVEVLIGQMVNLVRDGAPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D       
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGVVPDTGHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  + E+PRV++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLSHDKEGTLLRSIGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DERPTDLHAARLALCEATRQVIANGLTILGVTAPERM 550


>gi|309775278|ref|ZP_07670287.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916941|gb|EFP62672.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 547

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 208/586 (35%), Positives = 312/586 (53%), Gaps = 40/586 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + LK  LK    K    +     IVIE P+D +HG  STN AM L+R L  +
Sbjct: 1   MN---QIENNLKQALKNAVQKAFDTELDTASIVIEIPKDKSHGDYSTNVAMQLTRMLKNN 57

Query: 61  PLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE +V  +  D  D++   IAG GFIN  +  + L +I++ ++     YG N  G+
Sbjct: 58  PRKIAEAVVEALDKDAADIERCEIAGPGFINFTIKNTSLAQIITRVLHEQDSYGHNNDGE 117

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTG +H+GH R A  GD++  LM  SGY+V REYY+NDAG QI  L  
Sbjct: 118 GLKVNVEYVSANPTGDLHLGHARGAAWGDSITRLMKASGYDVCREYYVNDAGNQIVNLGK 177

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY++ L   D DLPE  Y G  +K++   +AD+Y    + + +   L   K+  + 
Sbjct: 178 SLQARYREHL-GLDFDLPEDGYHGEDVKNIAIAIADEYKDAYVEYND-ANLKFFKEKGIA 235

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  IR DL    +  D++ SE      D   +   +D L  +G  YE           
Sbjct: 236 FELDKIRRDLDNFRVHFDVWSSEQSI--RDAGKVEKALDVLHEKGLTYE----------- 282

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +   L F +T  GDD DR L K DGSYTY   D+AY K K +RGFD ++ ++G+D
Sbjct: 283 -----EDGALWFATTKFGDDKDRVLRKKDGSYTYLVPDIAYHKDKLDRGFDMLVDLLGAD 337

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A   A+     ++ V + ++VRL  +G  +KMSKR G+ +T+R + +EVG 
Sbjct: 338 HHGYIPRLKASIEALGNNPDKLQVDIIQMVRLVENGEEVKMSKRLGNAVTIRELCEEVGV 397

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VR+  + R     LDFD    ++QS +NPV+Y QYA+AR  SI RQA +I     F+L
Sbjct: 398 DAVRYFFVQRAVDTHLDFDLGLARKQSNDNPVYYAQYAHARICSILRQASEIAEAQSFEL 457

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E+ L+ ++ E+  V+ +A  ++ P+K+  Y+  LA  FH  ++  
Sbjct: 458 LT----------HEKEIALMKYINEFTNVVSDAARSRAPHKVCNYIQKLAQHFHSFYNVC 507

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N           +L+  RL L+ A    + + L +IGV++  +M
Sbjct: 508 KVN------DPQQPELSSQRLALLKATKITLKNALYLIGVDAIEKM 547


>gi|118619176|ref|YP_907508.1| arginyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166232812|sp|A0PUL8|SYR_MYCUA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118571286|gb|ABL06037.1| arginyl-tRNA synthetase ArgS [Mycobacterium ulcerans Agy99]
          Length = 550

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 194/582 (33%), Positives = 293/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + +V+ERPR+  HG  ++N A+ L++ +G +P  
Sbjct: 4   ADLAELLKTTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  IV  +     + S  +AG GFINL L  S   KI+++I+ +G  +G + +    KV
Sbjct: 64  LAGWIVEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+  +   +  K     L+ P+ +     ++  V  M  
Sbjct: 184 AAK------GEPTPDDGYAGSYINDIAARVLQKAPDA-LSLPDAQMHETFREIGVDLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   +  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSD    Y A DLAY+  K ERGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRSSSFGDDKDRVVIKSDDKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  E    + VL+ ++V L RDG P++MSKR G  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGEDPGTVEVLIGQMVNLVRDGQPVRMSKRTGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D D     
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGLIPDTDHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L ++PR+++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLSHEKEGVLLRTLGDFPRMLKAAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +         +L   RL L  A    I +GL I+GV +P  M
Sbjct: 512 QG---DEEPTQLHTARLALCQATRQAIANGLGILGVTAPERM 550


>gi|228475105|ref|ZP_04059832.1| arginine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314937074|ref|ZP_07844421.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228270869|gb|EEK12266.1| arginine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313655693|gb|EFS19438.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 553

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 314/586 (53%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I +E P+D  +G  STN AM+L++    +
Sbjct: 1   MNIIEKVKKTLIQEIEASIKKANLAEDI-PEIKVEIPKDTKNGDYSTNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  ++S  +  G ++G     K
Sbjct: 60  PRDIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +E+VSANPTG +H+GH R A VGD+LA+++  +GY+VTREYYINDAG QI  LA 
Sbjct: 120 NKKILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIETRFFEALGDTSHEMPADGYNGKDIVEIGKDLAKKH-PEMKDYSDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  ++ DL   N+  D + SE   +  +   I + ++ +   GY YE           
Sbjct: 239 YEMDKLKKDLSDFNVHFDNWFSETSLY--ENGAIDNTLEKMHELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++D + 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A  ++ P++L  Y+ DLAS FH  ++  
Sbjct: 461 DFSTI------TNEKAIDLLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V +++ + T   + L+ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM 553


>gi|260655517|ref|ZP_05861005.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629965|gb|EEX48159.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 561

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 200/590 (33%), Positives = 314/590 (53%), Gaps = 34/590 (5%)

Query: 1   MY-LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M    A   + +   L +I  +  ++     R+  ERP+D +HG  +TN AM  ++ LG 
Sbjct: 1   MNESLAALQTSVTAALAKIAQEKGIQLPETCRVEFERPKDESHGDWATNVAMKCAKILGT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE + + I     + S+ +AG GFIN  LS  ++  +++ I  +G  YG++ +G 
Sbjct: 61  RPRDLAERLTSLIDDSKHIASMEVAGPGFINFRLSNQWMDDLVARIAENGENYGKSSVGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +EFVSANPTGP+HVGH R A VGD + +++AF+G++V +EYY+NDAG QIN LA 
Sbjct: 121 GRSVQVEFVSANPTGPLHVGHGRGAAVGDVVGNILAFAGWKVEKEYYVNDAGLQINILAK 180

Query: 180 SVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           S+  RY +     +     D P   Y G Y+    + + +   ++ +N  +++ L  ++ 
Sbjct: 181 SILARYFELQGCPEKLPFDDAPGAMYKGAYIYDEARRVIEAVGNKFVNSSQDEALAYLRQ 240

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  Q +++ I+ DL    ++ + F SE   +  +   +R  ++ L   GYVYE       
Sbjct: 241 FGAQHILENIKSDLARFGVKFNQFFSEKSLY--ERDLVRKAVETLREAGYVYE------- 291

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L +RST  GDD DR L +S G  TYFA+D+AY K K++RGFD +I V
Sbjct: 292 ---------KDGALWYRSTDFGDDKDRVLFRSTGEPTYFASDVAYHKEKFDRGFDRVIDV 342

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G DH GYV R+ A    + +     NVLL + V L +DG  + MS R G F TL  ++D
Sbjct: 343 WGCDHHGYVPRINAALRGLGKDAGDFNVLLIQFVNLVKDGQIVGMSTRGGKFETLASLLD 402

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ R+  L R++   LDFD  + K +S +NPV+YVQYAYAR  S+ R+A++   D+
Sbjct: 403 EVGVDAARYYFLMRRSDSQLDFDMDQAKRESSDNPVYYVQYAYARIASLTRKAQEKNIDM 462

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              L     +         E +L+  L  +P  +E A    EP+ L  Y+++L+  FH  
Sbjct: 463 TKPLPFDGRL----MTSPEEKRLLTALETFPGELERAAAGLEPHLLVTYVHELSGHFHAF 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       +   +  L    L LV AV +++ +   I+G  +P  M
Sbjct: 519 YNSCR-------ILDEDEPLRSSHLALVQAVRTVLKNCFGILGFSAPERM 561


>gi|225022821|ref|ZP_03712013.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944428|gb|EEG25637.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 550

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 299/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +D SS +     +I    +++  IL +++V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   SDLSSLINTEAHKILADRQLDVTILPEQVVVERPRNPEHGDYATNLALQIAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A L+V  +    ++ +V IAG GFIN+ L+ +   +I++ I+V+G  YG N +  G ++
Sbjct: 64  LASLLVDALSAHDEIATVDIAGPGFINIRLAAAAQGQIVADILVAGTTYGHNSLYSGERI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++A  G +VTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPVHLGSTRWAAVGDSLGRILAACGADVTREYYFNDHGRQIDRFTNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +         +PE  Y G Y+  +   +  +    +L   E       +   V+ M  
Sbjct: 184 AAK------GQPVPEDGYGGDYITEIAANIVAQE-PGVLQQSEPDMRETFRALGVELMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +D L   G +Y                
Sbjct: 237 HIKTTLHEFGVDFDVYFHENSLF--ESGAVDRAVDKLKENGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K+ERG    IY++G+DH GY
Sbjct: 279 FSNGAWWLRSTNYGDDKDRVVIKSDGDAAYIAGDIAYVANKFERGHTRSIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+      + VL+ +LV L RDG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 ISRLRAAAAAMGYNPNNVEVLIGQLVNLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D      QS ENPV+YVQYA+AR  S+ ++A  +            
Sbjct: 399 YSLVRSSVDSTLDIDLTLWANQSNENPVYYVQYAHARLCSLAKKAAAVGVTASKPDLSL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +  E  LI  L EYP V++ A   +EP+++A Y+ +LA  FH  +   +  P
Sbjct: 458 ------LTEDHEGTLIRTLGEYPTVVKAAAELREPHRIARYIEELAGTFHRFYDTCQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   RL L  A   +I + L ++GV +P +M
Sbjct: 512 K---AGEQAQPIHTARLALATATRQVIANALGLLGVTAPEQM 550


>gi|326902914|gb|EGE49847.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis W-148]
          Length = 550

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 64  LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLTGRKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+ ++ +++  K     L+ P+ +     +   V  M  
Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H G    + + I  L   G +YE               
Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D +     
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|227832873|ref|YP_002834580.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182639|ref|ZP_06042060.1| arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254782956|sp|C3PFN8|SYR_CORA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|227453889|gb|ACP32642.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 553

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 185/581 (31%), Positives = 298/581 (51%), Gaps = 33/581 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D S  +KN    +  + +++  +L   + +ERPR+  HG  +TN A+ +++  G  P  +
Sbjct: 5   DLSVLIKNTAAAVLTEHELDASVLPETVTVERPRNPEHGDYATNLALQVAKKAGAQPREL 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+ +   +  +  +D   IAG GF+N+ L+ +    I++ ++ +G ++G N   +G K+N
Sbjct: 65  AQWLADALAGNDAIDEASIAGPGFLNIRLAAAAQGAIVAQVLNAGADFGSNTTYQGKKIN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  A S+   
Sbjct: 125 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFARSLVAA 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y+K + + + ++ +   L+  + +     +   V+ M   
Sbjct: 185 AK------GEPTPEDGYGGGYIKEIAQGVLEQ-NPGALDGSDAEVQEAFRSAGVEMMFAQ 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++ L    +  D++  E+     +   +   I  L   G +YE                
Sbjct: 238 IKESLHEFGVDFDVYFHENSLF--ESGAVEKSIQKLKDNGKLYEA--------------- 280

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                  +ST  GDD DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY+
Sbjct: 281 -EGAWWLKSTEYGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYI 339

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL A A A+      + VL+ ++V L RDG  +KMSKRAG  ITL  +V+ +G D  R+
Sbjct: 340 ARLRASAQALGYDPDAVEVLIGQMVNLVRDGKAVKMSKRAGTVITLDDLVEAIGVDGARY 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++       LD D      QS +NPV+YVQY +AR  SI R+A ++     FD      
Sbjct: 400 SLVRSSVDSSLDIDLGLWASQSADNPVYYVQYGHARICSILRKAAELG----FDTAALAD 455

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
            P +      E  LI  L E+P V+  A   +EP+++A Y  +LA+VFH  +   +  P+
Sbjct: 456 APLDLLTHDKEGDLIRTLGEFPEVVATAATLREPHRIARYAEELAAVFHRFYDQCQVLPK 515

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     +   RL L  A   ++++ L  +GV +P +M
Sbjct: 516 ---AGEETEPIHSARLALASATRQVMSNALTTVGVSAPEKM 553


>gi|148822510|ref|YP_001287264.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|253799662|ref|YP_003032663.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435]
 gi|254550299|ref|ZP_05140746.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289554918|ref|ZP_06444128.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605]
 gi|297633842|ref|ZP_06951622.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297730829|ref|ZP_06959947.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|313658161|ref|ZP_07815041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|148721037|gb|ABR05662.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis F11]
 gi|253321165|gb|ACT25768.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435]
 gi|289439550|gb|EFD22043.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605]
 gi|328459408|gb|AEB04831.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 4207]
          Length = 550

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 64  LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLSA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+ ++ +++  K     L+ P+ +     +   V  M  
Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H G    + + I  L   G +YE               
Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D +     
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|329894770|ref|ZP_08270571.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922759|gb|EGG30092.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 558

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 191/586 (32%), Positives = 302/586 (51%), Gaps = 39/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   L  +  +  ++K  +  I IER RD +HG  ++N A+ +++  GL+P  +AE
Sbjct: 5   LQGLIAQALNALVEQSTLQKDSVGAIQIERTRDPSHGDFASNIALAMAKKAGLNPRQLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A +  D  +D   IAG GFIN +LS S    +++SI+  G  +G N +G   +V IE
Sbjct: 65  KIIAALPADKALDRCEIAGPGFINFFLSKSASTSVIASILEQGAAFGTNALGNNQRVQIE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGDTL+ L+   GY V RE+Y NDAGAQI+ LA SV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAVGDTLSRLLQACGYRVDREFYYNDAGAQIDHLARSVQARC- 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAM 241
           + L  +  + P+  Y G Y+  + K   DK        E+    +   +  +++++V  +
Sbjct: 184 EGLDPSSPEWPQDGYRGEYIVDLAKAFQDKAVIQAEDREVAASGDIGDIDAIREFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  ++ D +  E   +      + D ++ L   G+ YE             
Sbjct: 244 RREQDLDLKAFGVEFDYYFLESSLYA--SGAVDDTVERLRDNGFTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              D   L   +   GDD +R + K +G YTYF  D+AY   K+ RG+D +I   G+DH 
Sbjct: 289 ---DDGALWLNTEAFGDDKNRVMRKREGGYTYFVPDVAYHLNKWNRGYDVVINEQGADHH 345

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +     +L ++V + R+G  +K+SKRAG ++TLR +VDEVG 
Sbjct: 346 STVTRVRAGLQALKAGIPEGWPEYVLHQMVLVMRNGEEVKLSKRAGSYVTLRDLVDEVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++ R  S  L FD      QS ENPV+Y+QYA+AR  S+  +  +         
Sbjct: 406 DATRYFLVARAPSSQLTFDIDLALSQSNENPVYYIQYAHARICSMLNKLANTPS------ 459

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +     +  +  E  LI  L ++P V++ A   + P+ +A +L DLA+ FH  ++  
Sbjct: 460 ASVSDAALAALSEPQEEALIKELDKFPEVVKQAGQQRAPHMIANFLKDLAAAFHTFYNAH 519

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++      R+ L  A   ++ +GL+I+GV +P  M
Sbjct: 520 K-------VLVDDATTQEARVALCLATQHVLQNGLDILGVSAPESM 558


>gi|15608432|ref|NP_215808.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15840742|ref|NP_335779.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792485|ref|NP_854978.1| arginyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121637221|ref|YP_977444.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661080|ref|YP_001282603.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|167969617|ref|ZP_02551894.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215403132|ref|ZP_03415313.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215430177|ref|ZP_03428096.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445469|ref|ZP_03432221.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|219557191|ref|ZP_03536267.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224989696|ref|YP_002644383.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254364189|ref|ZP_04980235.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260186229|ref|ZP_05763703.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200343|ref|ZP_05767834.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204548|ref|ZP_05772039.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289442731|ref|ZP_06432475.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289446887|ref|ZP_06436631.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A]
 gi|289569302|ref|ZP_06449529.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17]
 gi|289573955|ref|ZP_06454182.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85]
 gi|289745038|ref|ZP_06504416.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289753369|ref|ZP_06512747.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289757392|ref|ZP_06516770.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|294994847|ref|ZP_06800538.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|306775461|ref|ZP_07413798.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001]
 gi|306971571|ref|ZP_07484232.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010]
 gi|307079285|ref|ZP_07488455.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011]
 gi|307083854|ref|ZP_07492967.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012]
 gi|54039682|sp|P67570|SYR_MYCBO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|54042043|sp|P67569|SYR_MYCTU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232808|sp|A1KI80|SYR_MYCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232811|sp|A5U1Z1|SYR_MYCTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782976|sp|C1AMT6|SYR_MYCBT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1322416|emb|CAA97757.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA
           ligase) [Mycobacterium tuberculosis H37Rv]
 gi|13880933|gb|AAK45593.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618074|emb|CAD94185.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA
           ligase) [Mycobacterium bovis AF2122/97]
 gi|121492868|emb|CAL71339.1| Probable arginyl-tRNA synthetase argS [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134149703|gb|EBA41748.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505232|gb|ABQ73041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|224772809|dbj|BAH25615.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289415650|gb|EFD12890.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289419845|gb|EFD17046.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A]
 gi|289538386|gb|EFD42964.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85]
 gi|289543056|gb|EFD46704.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17]
 gi|289685566|gb|EFD53054.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289693956|gb|EFD61385.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289712956|gb|EFD76968.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|308216081|gb|EFO75480.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001]
 gi|308358941|gb|EFP47792.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010]
 gi|308362849|gb|EFP51700.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011]
 gi|308366489|gb|EFP55340.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012]
 gi|323720249|gb|EGB29348.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CDC1551A]
          Length = 550

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 64  LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+ ++ +++  K     L+ P+ +     +   V  M  
Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H G    + + I  L   G +YE               
Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D +     
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|242241972|ref|ZP_04796417.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234603|gb|EES36915.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 553

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 308/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MSIIDQVKQTLIEEIEVSIRKANLAEDI-PEIKIEIPKDPKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  +G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYTDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I + +  +   GY YE           
Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIENTLSKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553


>gi|308272771|emb|CBX29375.1| Arginyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 554

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 204/586 (34%), Positives = 340/586 (58%), Gaps = 36/586 (6%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + +D    L +  K+   K K+         IE P+  AHG  S+N AM+++    + P
Sbjct: 3   NILSDI---LLSAAKKAFDKQKLASSDFPAFGIEEPKLSAHGDFSSNFAMVMASLQKMPP 59

Query: 62  LTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IAE I A I   +  +D + IAG GFIN +++P     +L +I     ++G   IGK 
Sbjct: 60  RKIAEAITAEIEDTEGVIDKIEIAGPGFINFFINPCAWHSVLRTIYEKDEKFGSCDIGKN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+HVGH R A VGD+ A++++F GY+V REYYIND+G QI+TL  S
Sbjct: 120 RKVQVEFVSANPTGPLHVGHGRGAAVGDSTANILSFCGYDVQREYYINDSGRQISTLGRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++ L+    + P   Y G Y++ + +++ ++   +LL+ PEEK +     ++   
Sbjct: 180 VYLRYKE-LHEEKINFPGDCYQGDYIRDIAQKIKNENQIDLLDEPEEKAVMFCARFAADD 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++  I++DL+   ++ D + SE      D   ++ ++++   +  +YE            
Sbjct: 239 ILADIKNDLELFGVKFDNWYSEQSLF--DSGKVKSVLEDFKNKNIIYE------------ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                     F+++  GD+ DR +++++G  TYFA+D+AY   K++RGF+ ++ V G+DH
Sbjct: 285 ----KDGAFWFKTSEYGDEKDRVVIRNNGLTTYFASDIAYHIDKFDRGFERIVDVWGADH 340

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY++R+ A   A  +K+ Q NV+L +LV L R+G P+ MS R+G+F+TL  VV EVG+D
Sbjct: 341 HGYIQRICASIEASGQKEDQFNVILIQLVNLLRNGEPVAMSTRSGEFVTLEDVVKEVGAD 400

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDL 479
           + RF+ L R     LDFD    K++S ENPV+YVQY +AR  SI R+A ++   ++ +D 
Sbjct: 401 AARFIFLTRHYESHLDFDLELAKKKSNENPVYYVQYVHARISSIIRKADELGVKEIRYDD 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V+      +  E+Q++  L+ YP V++++    EP+++ +YL +LA+ FH +++  
Sbjct: 461 KNITVLK-----EAEEIQILKILSTYPEVVKSSAELLEPHRITYYLMNLAAAFHSYYNKC 515

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V +++  +T  RL LV A+  +I +GL ++GV +P  M
Sbjct: 516 R-------VLSDDPVITKNRLFLVLAIKKVIRNGLKLLGVSAPEIM 554


>gi|4894688|gb|AAD32590.1|AF126720_1 arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 550

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 193/582 (33%), Positives = 293/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L   + +ERPR+  HG  +TN A+ L + +G++P  
Sbjct: 4   ADLAELLKATAAAVLTEHDLDVAALPATVTVERPRNPEHGDYATNLALQLGKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +    +AG GF+NL +  S    I+++++ +   YG +    G  V
Sbjct: 64  LAGWLATALTAADGIAVAEVAGPGFVNLRIEASAQGVIITNVLAAEGSYGSSDQYAGRNV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGDTL  L+A  G  VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDTLGRLLATQGAAVTREYYFNDHGAQIDRFVNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  + +++  K    +L  PE++     +   V  M  
Sbjct: 184 SAK------GEPTPEDGYAGDYIVDIAQQVIAKAPD-VLGLPEDQQRETFRAIGVNLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++   D  H      +   I  L   G +YE               
Sbjct: 237 HIKQSLHDFGTDFDVYTHGDWMHT--SGRVDQAITQLREAGSIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG+  Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGNAAYIAGDLAYYLDKRKRGFDLCIYMVGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A D+   ++ D     
Sbjct: 399 YALIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLCALARNAADLGVSVNTDHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +      E  LI +L E+PRV++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----DLLTHEKEGALIRNLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEEPGDLHSARLALCRATRQVIANGLAILGVSAPERM 550


>gi|111018491|ref|YP_701463.1| arginyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123145255|sp|Q0SGN1|SYR_RHOSR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110818021|gb|ABG93305.1| arginine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 550

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 188/585 (32%), Positives = 299/585 (51%), Gaps = 42/585 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L   + +ERPR+  HG  +TN AM +++ +G +P  
Sbjct: 4   ADLAELLRGTAAKVLDERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +DS  IAG GF+N+ L+      I++ I+  G  +G      G ++
Sbjct: 64  LAGWLAEALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILDEGAAFGSGHTLDGKRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  +++  G  VTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  +   ++L  P  +   + +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAAQVQSQ-RPDVLELPAGEQQEVFRAIGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +++               
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L RDG+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLF 480
           + M+       +D D         ENPV+YVQYA+AR  +I R A D+     D DF L 
Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVADPDFSLL 458

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E  LI  L EYPRV+ +A   +EP+++A YL +LA  +H  +   R
Sbjct: 459 ----------VSEQEGDLIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACR 508

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P+          L + RL L  A   ++++GL ++GV +P +M
Sbjct: 509 ILPQG---DEEVGPLHIARLALCDASRQVLSNGLALLGVSAPEQM 550


>gi|323706265|ref|ZP_08117832.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534429|gb|EGB24213.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 562

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 199/582 (34%), Positives = 322/582 (55%), Gaps = 32/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             +  + N ++E      +  + +  + IE P++   G L+ N AMI+++P  + P  IA
Sbjct: 11  QITEMVINSIEEAKKNGLLNIEEIPSVEIEEPKEKQFGDLAINTAMIMAKPAKMPPRKIA 70

Query: 66  ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E+I   +K++  + + V IAG GF+N YL+  Y  + L  I   G +YGR  IG G +V 
Sbjct: 71  EIIKDGLKLEGTMIEKVEIAGPGFMNFYLNDDYNVEALMLIKEKGPDYGRVNIGNGKRVQ 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD L+S++ ++GY+VTRE+YINDAG QI    LS+  R
Sbjct: 131 VEFVSANPTGPMHMGNARGGALGDALSSILDYAGYDVTREFYINDAGNQIEKFGLSLEAR 190

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y Q L   D+++PEG Y G  +    KE  + Y  +  +   E+    +  Y ++  +  
Sbjct: 191 YLQLL-GEDAEVPEGGYHGDDIIERAKEFLELYGDKYKDADPEERRKALIQYGLKKNIAK 249

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +++DL+A  I++D++ SE+  H  +   ++ +I+ L  +GY YE                
Sbjct: 250 LKEDLEAYGIEYDVWFSENTLH--ESGEVQSVIEELKEKGYTYE---------------- 291

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
               L F+ T+ G + D  L++++G  TY A+D+AY K K+  RGFD +I + G+DH G+
Sbjct: 292 KDGALWFKETLFGAEKDDVLVRANGFPTYLASDIAYHKNKFVTRGFDWVIDIWGADHHGH 351

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V  ++    A+     +++VLL +LVRL +    ++MSKR G  +TLR ++DEVG D+ R
Sbjct: 352 VAPMKGAMKALGIDPDRLDVLLMQLVRLMKGKEVVRMSKRTGKMVTLRDLIDEVGKDAAR 411

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F    R     +DFD     EQS ENPVFYVQYA+AR  SI RQ K+   D D       
Sbjct: 412 FFFNMRSADSAVDFDMDLAVEQSNENPVFYVQYAHARICSILRQLKEDGIDTD----NLK 467

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  +   + +E+ LI  LA  P  I  A     P+++  Y+ D++S+FH  ++  R   
Sbjct: 468 EVNLKLLSEDTEISLIKKLAYLPEEITIAANTMAPHRITRYILDVSSLFHTFYNSCR--- 524

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V+  + +L   R+ L+ A   +I + L+++ + +P +M
Sbjct: 525 ----VRGVDEELMKARIVLIDATRIVIKNVLDMLKITAPEKM 562


>gi|323699296|ref|ZP_08111208.1| arginyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459228|gb|EGB15093.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 547

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 216/578 (37%), Positives = 334/578 (57%), Gaps = 34/578 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              L+  LK+    + +     D+ VIE P+D A G +S N AM+L++     P  +AE 
Sbjct: 4   KIHLEGALKQALEGLGLP--WPDKAVIEPPKDSAFGDMSANVAMLLAKDAKKAPRAVAED 61

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           I A +  D  ++ + IAG GF+N   +P++ R+ +S+I+  G  YG + +G GTKV +E+
Sbjct: 62  IKAALAGDALIEKIDIAGPGFLNFTFAPAFWRETVSAILDQGEAYGSSTLGNGTKVQVEY 121

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+H+GH R A +GD+L  ++  +GY+V  EYYINDAG Q+  L  S+ +R +Q
Sbjct: 122 VSANPTGPLHIGHGRGAALGDSLTRILEKAGYDVEAEYYINDAGRQMRILGGSILYRARQ 181

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               N ++ PE YY G Y+  + ++       +LL+ PE   +   K+Y +  +++ I+D
Sbjct: 182 LGGLNPAE-PEDYYRGEYITDIARDFMA-MRPDLLDLPEADAVEACKEYGMGVILQGIKD 239

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL A +++HDI+ SE      +   + +   +L   G  Y                    
Sbjct: 240 DLAAFHVRHDIWFSEKSLV--NDGKVDETFADLTASGMGYAA----------------DG 281

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
              F+ST++GDD DR L KS+G  TYFA+D+AY   K++RGFD +I + G+DH GYV R+
Sbjct: 282 AFWFKSTLLGDDKDRVLRKSNGDTTYFASDIAYHDNKFKRGFDLVIDIWGADHHGYVPRM 341

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            A   A+  K   ++V+L  LV L RDG PI MS RAG F TL+ VVDEVGSD+ RFM L
Sbjct: 342 MAACEALG-KPGGLSVILVNLVNLLRDGQPIAMSTRAGQFETLKDVVDEVGSDAARFMFL 400

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            RK+   LDFD   VK++S +NPV+YVQYA+AR RS+ ++A++        + P ++   
Sbjct: 401 SRKSDSKLDFDLELVKQKSMDNPVYYVQYAHARIRSLDKKAEEAGI-RPAAVSPASLALL 459

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++E+D   L+L+  L +YP  +E A   Q P+ ++ YL +LAS  H ++++         
Sbjct: 460 DTEWD---LELLKLLDQYPDYVEAAARTQSPHLISMYLQELASTLHRYYTNCH------- 509

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V +    +   RL L+  VA ++ +GL ++GV +P  M
Sbjct: 510 VLSAEPDVASARLMLLDCVAGVVANGLGLLGVNAPESM 547


>gi|254491079|ref|ZP_05104260.1| arginyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463592|gb|EEF79860.1| arginyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 585

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 207/615 (33%), Positives = 317/615 (51%), Gaps = 62/615 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + +   L     K  +E   L  I IER +D  HG  + N AM+L++P  ++P 
Sbjct: 1   MKDQLKNLVGQALSIFIQKHGLEID-LPEIQIERTKDKTHGDFACNIAMMLAKPAKMNPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  IV  +     V  V IAG GFIN +LS    ++++  I+    +YG++ IGKG K
Sbjct: 60  QIATDIVEALPTSDVVTQVEIAGPGFINFFLSAEASQQVVKEILSKAEKYGQSQIGKGKK 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G  ++SL+  +G+ V REYY+NDAG Q++ L  SV+
Sbjct: 120 VQVEFVSANPTGPLHVGHGRGAAYGSVVSSLLNAAGFNVHREYYVNDAGRQMDILGTSVW 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------- 226
            RY QA        P   Y G Y+  +  EL   ++ +  +  +                
Sbjct: 180 LRYLQAC-GETITFPSNGYQGSYVLDIAAELKQTFAEQFRHPADAVFDGVPADEPQGGDK 238

Query: 227 ----------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                           E    IV D  + A++  IRDDL     ++D + SE      + 
Sbjct: 239 ELHIDGLTNQAKQLLGEANYRIVFDKGLNAILGDIRDDLAEFGTEYDEWFSERSLV--ES 296

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I+ L + G +YE                ++    F+ST  GD+ DR +++ +G 
Sbjct: 297 GEVEKAIEQLKQAGQLYE----------------EKGAWWFKSTDYGDEKDRVVIRDNGQ 340

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY+RGFD +I + G+DH GY+ R++A   A+ +   Q+ VLL +   
Sbjct: 341 ATYFASDIAYHLNKYQRGFDEIIDIWGADHHGYIPRVKASMQAMQQNVDQLKVLLVQFAV 400

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R+G+F+TLR + DEVG D+ RF  + R   + +DFD    K QS +NP
Sbjct: 401 LYRGAEKVGMSTRSGEFVTLRQLRDEVGKDAARFFYVMRGADQHMDFDLELAKSQSNDNP 460

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+FRQ  +     D     +++   +   +T E  L+  LA+YP ++E
Sbjct: 461 VYYVQYAHARVCSVFRQLTERGHAWDKATGEQHL---DRLTETHEDALMTMLAKYPEILE 517

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL DLA  FH +++  +          ++ +L+  RL L+ AV  +I
Sbjct: 518 TAALNHTPHLLAHYLTDLARDFHTYYNAHQF-------IVDDNELSQARLTLIEAVRQVI 570

Query: 571 NSGLNIIGVESPNEM 585
            + L ++GV +P  M
Sbjct: 571 QNALTVMGVSAPESM 585


>gi|319400084|gb|EFV88320.1| arginyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 553

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MSIIDQVKQTLIEEIEVSIRKANLAEDI-PEIKIEIPKDPKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  +G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYTDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I++ +  +   GY YE           
Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553


>gi|57866242|ref|YP_187858.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293368064|ref|ZP_06614696.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|71153572|sp|Q5HRD1|SYR_STAEQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57636900|gb|AAW53688.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291317754|gb|EFE58168.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329738198|gb|EGG74413.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 553

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 308/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   ++    K  + + I   I IE P+D  +G  S+N AM+L++    +
Sbjct: 1   MSIIDQVKQTLIEEIEVSIRKANLAEDI-PEIKIEIPKDPKNGDYSSNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +         V IAG GFIN YL   YL  I+   +  G  +G     K
Sbjct: 60  PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T + +E+VSANPTG +H+GH R A VGD+LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNASVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY +AL +   ++P   Y G  +  +GK+LA K+  E+ ++ +E+ L   +   V 
Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYTDEERLKTFRQLGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I + +  +   GY YE           
Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIENTLSKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R++   DD DR L+K DG+YTYF  D AY   K  RG D +I +MG+D
Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL ++G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NP++Y QYA+AR  SI +QAK+   ++  D 
Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   + L+  +AE+   IE+A   + P++L  Y+ DLA+ FH  ++  
Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   +++ L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553


>gi|197122748|ref|YP_002134699.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689865|sp|B4UEJ9|SYR_ANASK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|196172597|gb|ACG73570.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 598

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 344/596 (57%), Gaps = 28/596 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
              R+    ++   +   + +         +E PRD  HG  + NAAM+L++  G  P  
Sbjct: 2   VRDRVIELFRKALAQGADDGRWPAAGAGFSVEAPRDPKHGDFAVNAAMVLAKQAGRPPRE 61

Query: 64  IAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           +A+ IV  +       D+  + IAG GFIN+ LSP    + L+  V  G +YGR  +G+G
Sbjct: 62  LAQAIVEAVRAADTAGDLAGLEIAGPGFINVRLSPDLWLRTLARAVAEGPDYGRTAVGQG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+VSANPTGPMHVGH R AVVGD +  L+ ++G++VTREYY+ND GAQ+ TLA S
Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQGLLRWAGFDVTREYYVNDYGAQVQTLARS 181

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RYQ+ L+     +P   YPG Y+K +   L  +Y +  L+ PE +WL + +D++VQ 
Sbjct: 182 VHLRYQE-LHGRTVTMPPKSYPGEYVKDIAAGLKAEYGARFLDAPEAEWLTLFRDHAVQH 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-- 298
           ++ +IR DL A+NI  D + SE   +  +   +   +  L  +  VY G LPPPKSK   
Sbjct: 241 VLGMIRGDLAAVNISFDRWSSEKALY--ESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQ 298

Query: 299 --------TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                    +         LFRS+  GD+VDRP+ K+DG+ TYF AD+AY   K +R  D
Sbjct: 299 PPAQPQPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYFCADIAYHWDKRQR-AD 357

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++ V+G+DH GYV RLEA   A+   +  ++V+L ++V L R G  +KMSKRAG  ++L
Sbjct: 358 ALVDVLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSL 417

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R VVDEVG D+ RF+ L R++   LDFD    K Q+ +NPVFYVQY +AR  +IF++A++
Sbjct: 418 REVVDEVGRDATRFIFLTRRSDAPLDFDVELAKRQTLDNPVFYVQYGHARLAAIFQKARE 477

Query: 471 IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               + DFDL     +         E  LI  +A +P ++  A +A EP+++AFYL +  
Sbjct: 478 AGHAVPDFDLEAARTLA-----SPEEQDLIRRIAAFPDMLAAAALAYEPHRVAFYLQETI 532

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  ++ G+++     V   +   T  RL L  A+  ++ +GL ++GV +P+ M
Sbjct: 533 AAFHSWYTQGKKSGEK--VIGPDPVKTAARLFLCRALKQVLANGLAVLGVSAPDRM 586


>gi|313894766|ref|ZP_07828326.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976447|gb|EFR41902.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 553

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 305/587 (51%), Gaps = 36/587 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +    +    +    +  + +      IV+E P +   G ++TN AM  +R    
Sbjct: 1   MQIKQEIEQAIMTAAERAAAEGLLPQGAAFPPIVLEEPPEKDMGDVATNFAMQSARVFRK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIG 118
            P  IAE+IV+ +  D  ++   IAG GFINLYL PS    +L  ++V+G  YG+     
Sbjct: 61  SPKAIAEIIVSYLTGD-WLEHTEIAGPGFINLYLKPSVYADMLRGVLVAGEAYGQLPARA 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V +E+VSANPTGP+HVGH R A VG  L  L+  +GY V  EYY+NDAG Q+N LA
Sbjct: 120 DAPRVQVEYVSANPTGPLHVGHGRGAAVGSALVKLLRAAGYAVDSEYYVNDAGNQMNLLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +SV  RY + L       PE  Y G  +    + + DK   + L  PEE+ L I +D + 
Sbjct: 180 VSVNARYLELL-GQAVTFPENGYHGADITETARRIIDKDGDKYLALPEEERLRIFQDVAY 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +++DL    +  D + SE   H   P  +R  +D L  +G  Y           
Sbjct: 239 REKLAALKEDLADFGVTFDRWFSERTLH---PDAVRRAVDELLARGTAYR---------- 285

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     +  RST  GDD DR + + +G  TY AAD+AY   KY RG+  +I + G+
Sbjct: 286 ------KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDDKYRRGYGRLINIWGA 339

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYV R++A  AA+    AQ+ VL  ++V LYRDG  +K+SKR G+ +TLR +++EVG
Sbjct: 340 DHHGYVARVKAAMAALGHDPAQLTVLFLQMVSLYRDGDLVKLSKRTGETVTLRELMEEVG 399

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+  + R     LDFD    K++S ENPV+YVQYA+AR  SIFRQA ++       
Sbjct: 400 VDAARYFFIMRSLDSQLDFDLDLAKKRSNENPVYYVQYAHARISSIFRQAGELG------ 453

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P +        + +E+ LI  LA YP  I  A     P ++A Y Y+LA  FH  ++ 
Sbjct: 454 LMPADGAELSLLKEDTEIALIKKLAAYPEEIARAAAEYAPQRIARYSYELAGAFHSFYNQ 513

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       +    + L   RL LV A   +I   L I+GV +P +M
Sbjct: 514 CR-------IVGQEKPLASARLALVTATRHVIRHSLGILGVSAPEQM 553


>gi|215410929|ref|ZP_03419737.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|298524796|ref|ZP_07012205.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|298494590|gb|EFI29884.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
          Length = 550

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 64  LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+ ++ +++  K     L+ P+ +     +   V  M  
Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H G    + + I  L   G +YE               
Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGDDSATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D +     
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|53802759|ref|YP_115476.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81680656|sp|Q602H4|SYR_METCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53756520|gb|AAU90811.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 586

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 307/615 (49%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L++ L+ +     +       + IER RD AHG  + N AM+L++    DP 
Sbjct: 1   MKKRLETLLRSALERLKTAGDLPADQEVPLQIERTRDPAHGDFAANTAMLLAKSARCDPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE I A +  DP V    IAG GFIN +L      ++++ I   G  +GR+ IG G +
Sbjct: 61  RLAEKIRAALPEDPAVIRTEIAGPGFINFFLDAIAQHRVITDIHSQGPGFGRSSIGAGQR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G  +A L+  +G++V REYY+NDAG Q++ LA SV+
Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGAVVADLLEAAGFDVHREYYVNDAGRQMDILAASVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--------------- 227
            RY +         P   Y G Y++ +  +L            ++               
Sbjct: 181 LRYLENC-GEVLPFPANGYRGEYVRDIASDLYRTQGERYRTSADQVLLGLPPDEPQGGDK 239

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            +    V +  + +++  IRDDL      +  + SE      + 
Sbjct: 240 EEYIDAVVSKSKNLLGPERYREVFNAGLDSILDDIRDDLGEFGTHYQEWFSERSL--TET 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   ++ L   GYVYE                      F ST +GD+ DR L++ +G 
Sbjct: 298 GAVERALERLKSSGYVYE----------------KDGAQWFASTRLGDEKDRVLVRENGQ 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   K ERGFD ++ V G+DH GY+ R++A   A+    +++ VLL +   
Sbjct: 342 TTYFASDVAYHLNKLERGFDRIVNVWGADHHGYIPRVKAAIQALGGDASKLEVLLVQFAV 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    ++MS R+G+F+TLR + +EVG D+ RF  + RK+ + +DFD      ++ ENP
Sbjct: 402 LYRGTERVQMSTRSGEFVTLRQLRNEVGKDAARFFYVMRKSDQHMDFDLKLATSRTNENP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+FRQ  +     D     R +   E   +  EL L+  L+ YP V+E
Sbjct: 462 VYYVQYAHARVCSVFRQLDEKGWARD---LGRGMRRLERLCEPHELTLVASLSRYPEVVE 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ L  YL DLA+ FHG+++  +           +  L   RL L+ AV  +I
Sbjct: 519 QAALQYAPHHLVHYLRDLAAEFHGYYNSCQF-------LVEDGDLRDARLNLIDAVRQVI 571

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P  M
Sbjct: 572 ANGLGLLGVSAPETM 586


>gi|285017188|ref|YP_003374899.1| arginyl-tRNA synthetase (arginine--tRNA ligase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472406|emb|CBA14911.1| probable arginyl-trna synthetase (arginine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 562

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 190/591 (32%), Positives = 306/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + +   + +   ++ +     +    +    V+ERP+   HG  ++NAAM+L++    +P
Sbjct: 1   MKSQLRALIAQGIEALRATGILPTDTLPPDFVVERPKTREHGDFASNAAMLLAKAARTNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +V  +  + D+  V IAG GFIN +L P   ++ + +++  G +YGR+L+G G 
Sbjct: 61  RALAQQLVDALPANDDIRKVEIAGPGFINFHLGPGAYQREVLTVLKQGHDYGRSLVGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD LA L+  +G+   RE+Y ND G QI  LA SV
Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNARREFYYNDGGGQIENLARSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R       +  D PE  Y G Y++ V          +     +    +   L  ++ +
Sbjct: 181 QAR-AHGKTPDSHDWPEEGYRGDYIQDVADAYMTGATVNLEGHLVKGAKDPNDLEAIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   +R     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFGVDFDIYFLESSLYR--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG+   I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLSKWQRGYVRAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     K     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLARVRAGLQAMDLGIPKGWPEYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E G D+ R+ ++ RK    L FD    ++QS +NPVFYVQYA+AR  S+ RQA++   D
Sbjct: 402 EEAGRDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKQRD 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       DT+ L+L++ L+ YP V+ENA    EP+ +A YL +LA+ FH 
Sbjct: 462 YD---PADGMSQLNRLNDTTSLELMMELSRYPEVVENAGHVLEPHLIAQYLRELATAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           V  ++      +L L  A   ++ +GLN++GV +P +M
Sbjct: 519 WYHGT-------PVLVDDASERNAKLALAVAAQQVLANGLNLLGVCAPEKM 562


>gi|319785770|ref|YP_004145245.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464282|gb|ADV26014.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 562

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 190/587 (32%), Positives = 302/587 (51%), Gaps = 37/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + +   ++ +    K+         VIERP+   HG  +TNAAM+L++    +P  +A
Sbjct: 5   LKALVNQGIEALRVAGKLPADAPTPDFVIERPKTREHGDFATNAAMLLAKAARTNPRAVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +V  +    DV    IAG GFIN +L+    ++ ++ ++  G EYGRN  G+G    +
Sbjct: 65  QALVEAMPASDDVARAEIAGPGFINFHLAAGAWQREVAGVLRHGGEYGRNTTGQGRTAGV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+HVGH R A +GD +A ++  +G++V RE+Y NDAG QI  LA S   R 
Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCIARVLDANGWKVKREFYYNDAGVQIENLARSTQAR- 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + L   D++ P   Y G Y++ V          +     +    + + +  ++ ++V  
Sbjct: 184 LRGLKPGDAEWPAEAYNGDYIQDVADAYLRGDTVEIEGHAVTASGDVEDIDSIRRFAVAY 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +      DL A  ++ DI+  E   +R     + + +  L  +G+ YE            
Sbjct: 244 LRNEQNQDLAAFGVEFDIYFLESSLYR--DGKVEETVRELGAKGHTYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               +   L  RST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +G+DH
Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLSKWQRGYERAITELGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
            G + R+ A   A+     K     +L ++V + R G  +K+SKRAG ++TLR +++E G
Sbjct: 346 HGSLARVRAGLQALDVGIPKGWPEYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLIEEAG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ ++ RK    L FD    ++QS +NPVFYVQYA+AR  ++FRQ  +     D  
Sbjct: 406 RDATRWFLIARKPDSQLVFDIDLARQQSNDNPVFYVQYAHARVAALFRQGAEKGYAFDQ- 464

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +       D   L L+V L+ YP V+E A  + EP+ +A YL +LA  FH  +++
Sbjct: 465 --ANGLANLARLDDDGSLTLVVELSRYPEVVEAAGQSLEPHLVAQYLRELAYAFHTWYAN 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    V      L   RL L  AV  ++ +GL ++GV +P  M
Sbjct: 523 T-------PVLVEEPALRDARLALAQAVQQVLANGLGLLGVSAPERM 562


>gi|134301014|ref|YP_001114510.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189083532|sp|A4J9D2|SYR_DESRM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134053714|gb|ABO51685.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 561

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 206/586 (35%), Positives = 322/586 (54%), Gaps = 33/586 (5%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + +  +  L+  +     K +V K  +  ++IE PR+  HG  +TN AM L++P  + P
Sbjct: 7   NIKSSLAKALQVAIAGAVDKGQVNKLEIPEVIIEVPREKGHGDFATNLAMQLAKPAKMAP 66

Query: 62  LTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IAE I+  +   +  V+ V IAG GFIN YL PS++  ++  I+     YGR  +G G
Sbjct: 67  RKIAEAIIENLDLANTQVERVEIAGPGFINFYLQPSWVHGVIPMIIQEDRNYGRLELGDG 126

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +EFVSANPTG +H+G+ R A +GD+LAS++ F+GY V+REYYINDAG QI     S
Sbjct: 127 QRVQVEFVSANPTGLLHMGNARGAALGDSLASILDFAGYRVSREYYINDAGNQIENFGKS 186

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  RY Q L   D  LPE  Y G  +    K   +K    LL+  +      +  Y++Q 
Sbjct: 187 LEVRYLQQL-GQDIQLPEEGYHGEDIIDTVKGYINKNGRGLLDADQTTRRKTLAAYALQE 245

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  IR+ L    + +D++ SE   H  D   I++ +D L ++G++YE            
Sbjct: 246 KLTHIRNTLLDFGVVYDVWYSEQALH--DSGAIQETLDELRQKGFIYE------------ 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L F++T  GD+ D  +++S+G  TYFAAD+AY K KY+RGFD +I + G+DH
Sbjct: 292 ----QENALWFKATAFGDEKDEVVVRSNGIPTYFAADIAYHKDKYKRGFDRVIDIWGADH 347

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V R++    A+   +  + ++L +LVRL R G  ++MSKR G F+TL  +V+EVG D
Sbjct: 348 HGHVNRMKGSMEALGHNRDNLQIILMQLVRLLRGGEVVRMSKRTGQFVTLEELVEEVGRD 407

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDL 479
           + R+  + R     L+FD    K Q+ +NPVFY+QYA+AR  SI RQ ++   P  +   
Sbjct: 408 AARYFFVMRSPDSHLEFDLDLAKSQTNDNPVFYIQYAHARICSILRQLQEQGRPLPEIAA 467

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               V+ +E+E +          A++P  I  A     P+++A YL+DLA +FH  ++  
Sbjct: 468 INPTVLKEEAELELLRKL-----ADFPSEIAAAAEMMAPHRIARYLHDLAGLFHSFYNSH 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V   N  ++  RL LV  V  ++ + L ++G+ +P +M
Sbjct: 523 R-------VITENEAISEARLVLVQCVRIVLRNALGLLGLTAPEKM 561


>gi|320530137|ref|ZP_08031207.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137570|gb|EFW29482.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 553

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 210/587 (35%), Positives = 305/587 (51%), Gaps = 36/587 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +    +    +    +  + +   L  IV+E P +   G ++TN AM  +R    
Sbjct: 1   MQIKQEIEQAIMTAAERAAAEGLLPQGAALPPIVLEEPPEKDMGDVATNFAMQSARVFRK 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIG 118
            P  IAE+IV+ +  D  ++   IAG GFINLYL PS    +L  ++V+G  YG+     
Sbjct: 61  SPKAIAEIIVSYLTGD-WLERTEIAGPGFINLYLKPSVYADMLRGVLVAGEAYGQLPARA 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V +E+VSANPTGP+HVGH R A VG  L  L+  +GY V  EYY+NDAG Q+N LA
Sbjct: 120 DAPRVQVEYVSANPTGPLHVGHGRGAAVGSALVKLLCAAGYAVDSEYYVNDAGNQMNLLA 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +SV  RY + L       PE  Y G  +    + + DK   + L  PEE+ L I +D + 
Sbjct: 180 VSVNARYLELL-GQAVTFPENGYHGADITETARRIIDKDGDKYLALPEEERLRIFQDVAY 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +++DL    +  D + SE   H   P  +R  +D L  +G  Y           
Sbjct: 239 REKLAALKEDLADFGVTFDRWFSERTLH---PDAVRRAVDELLARGTAYR---------- 285

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     +  RST  GDD DR + + +G  TY AAD+AY   KY RG+  +I + G+
Sbjct: 286 ------KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDDKYRRGYGRLINIWGA 339

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYV R++A  AA+    AQ+ VL  ++V LYRDG  +K+SKR G+ +TLR +++EVG
Sbjct: 340 DHHGYVARVKAAMAALGHDPAQLTVLFLQMVSLYRDGDLVKLSKRTGETVTLRELMEEVG 399

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+  + R     LDFD    K++S ENP +YVQYA+AR  SIFRQA ++       
Sbjct: 400 VDAARYFFIMRSLDSQLDFDLDLAKKRSNENPAYYVQYAHARISSIFRQAGELG------ 453

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P +        + +E+ LI  LA YP  I  A     P ++A Y Y+LA  FH  ++ 
Sbjct: 454 LTPADGAELALLKEDTEIALIKKLAAYPEEIARAAAEYAPQRIARYSYELAGAFHSFYNQ 513

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       +    + L   RL LV A   +I   L I+GV +P +M
Sbjct: 514 CR-------IVGREKPLASARLALVTATRHVIRHSLGILGVSAPEQM 553


>gi|305682134|ref|ZP_07404938.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658607|gb|EFM48110.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 550

 Score =  561 bits (1447), Expect = e-157,   Method: Composition-based stats.
 Identities = 186/582 (31%), Positives = 298/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +D S  +     +I    +++   + +++V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   SDLSHLINTEAHKILADRQLDVTALPEQVVVERPRNPEHGDYATNLALQIAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A L+V  +    ++ +V IAG GFIN+ L+ +   +I++ I+ +G  YG N +  G ++
Sbjct: 64  LAGLLVDALSAHDEIATVDIAGPGFINIRLAAAAQGQIVADILAAGTTYGHNSLYSGERI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++A  G +VTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPVHLGSTRWAAVGDSLGRILAACGADVTREYYFNDHGRQIDRFTNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +         +PE  Y G Y+  +   +  +    +L   E       +   V+ M  
Sbjct: 184 AAK------GQPVPEDGYGGDYISEIAANIVAQE-PGVLQQSEPDMRETFRALGVELMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   +D L   G +Y                
Sbjct: 237 HIKATLHEFGVDFDVYFHENSLF--ESGAVDRAVDKLKENGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K+ERG    IY++G+DH GY
Sbjct: 279 FSNGAWWLRSTNYGDDKDRVVIKSDGDAAYIAGDIAYVANKFERGHTRSIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+      + VL+ +LV L RDG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 ISRLRAAAAAMGYNPNNVEVLIGQLVNLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D      QS ENPV+YVQYA+AR  S+ ++A  +   +D       
Sbjct: 399 YSLVRSSVDSTLDIDLTLWANQSNENPVYYVQYAHARLCSLAKKAAAVGVTVDNPDLSL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +  E  LI  L EYP V++ A   +EP+++A Y+ +LA  FH  +   +  P
Sbjct: 458 ------LTEDHEGTLIRTLGEYPTVVKAAAELREPHRIARYIEELAGTFHRFYDTCQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   RL L  A   +I + L ++GV +P +M
Sbjct: 512 K---AGEQAQPIHTARLALATATRQVIANALGLLGVTAPEQM 550


>gi|157827969|ref|YP_001494211.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165932660|ref|YP_001649449.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166232835|sp|A8GQM8|SYR_RICRS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083544|sp|B0BW17|SYR_RICRO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157800450|gb|ABV75703.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165907747|gb|ABY72043.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 576

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 243/585 (41%), Positives = 363/585 (62%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   + I +   I+ P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIVASKQLYNNQAIANTATIDIPKDSFNGDLSSNVAMIIAAKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +NIE+VSANPTGPMH+GH R AV GD LA ++    Y VT+EYY+NDAG+QIN L  +
Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ LA +Y ++LL    ++   I+K ++V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYDERFKIIKSFAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   H  D   I + +  L   G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLESMGLIYEGTLPAPKGKIHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D +R Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH
Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ +++ +++V +C+LV    +G+P+KMSKR G F +++ V +EVG D
Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNNEVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R  SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNNF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  L  + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLVSWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RFV  +N++LT+ RL L  A+  +I SGL +IGVE  N+M
Sbjct: 532 ENSEYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576


>gi|190571604|ref|YP_001975962.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019007|ref|ZP_03334814.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238065093|sp|B3CNF3|SYR_WOLPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190357876|emb|CAQ55335.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995116|gb|EEB55757.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 566

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 259/585 (44%), Positives = 364/585 (62%), Gaps = 20/585 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     +  ++E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKQISSLISSKLNELKQRGVINTS-AENFIVEPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA ++    K   +V  V IA  GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAGILAREFKPFDEVAEVEIASPGFINMHLKIEVWHGILKQINELKTEFGTLNIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             VN+EFVSANPTGP+H+GH R AV GD LA+L+   GY VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAVNVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYNVTKEYYINDAGAQIDTLIRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL      + +G YPG YLK +G+ LA KY  EL     E+   I+++Y++ +
Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKELR---AEEDNQIIREYTLSS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++D+  L + HD+F SE +        I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILELIKEDMSLLGVNHDVFTSEYEL----RGKIEESIKILSDKGLVYEGYLEKPKGKESE 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K DGS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 292 NWT-SRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 350

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +  P+KMSKR+G+F+T R VV+EVG D
Sbjct: 351 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENEKPVKMSKRSGNFLTARDVVEEVGRD 410

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 411 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 470

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +           EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 471 KTDG----------ELFLIKILAKWPDVVEIAARLYEPHRITFYLLEVAEAFHVLWGYGK 520

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EM
Sbjct: 521 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEM 565


>gi|220927743|ref|YP_002504652.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254782954|sp|B8I592|SYR_CLOCE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219998071|gb|ACL74672.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 564

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 307/586 (52%), Gaps = 32/586 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + + N + +     ++    +  I IE PR+  HG  STN AM +++     P 
Sbjct: 8   IRQQIRNAVINSINKSVETGELPSLEVTDITIEIPREKGHGDFSTNVAMQITKAAKKAPR 67

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA++I+  I  D    D V  AG GFIN  L  SYL + ++ I      YGR  IG G 
Sbjct: 68  QIADIIIKNIVTDGTYIDKVTCAGPGFINFTLDNSYLYETVNIIQQEKENYGRINIGNGK 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+G+ R   +GD +AS++  +GY VTRE+ INDAG QI     S+
Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLDAAGYNVTREFLINDAGNQIEKFGTSL 187

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             RY Q +   D+ + PE  Y G  +    K+    +  + +N   E+   +  D+++  
Sbjct: 188 EARYIQLIKGEDAIEFPEDGYQGEDITEHMKDFIAIHGDKYINTDSEERKKVFVDFALPR 247

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  I++ L++  I  DI+ SE   H+     + + I  L  +G   E            
Sbjct: 248 NIARIKEGLESYGIHFDIWFSEQSLHK--SGEVAETIQLLKDRGCTVE------------ 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
                   L  + +++G + D  L++++G  TYFAAD+AY + K+E RGF+ +I + G+D
Sbjct: 294 ----KEGALWLKGSVIGSEKDEVLVRNNGIPTYFAADIAYHRNKFEKRGFEWVINLWGAD 349

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G+V R++A  AA+     +++V+L +LVRLYR+G   +MSKR G  I+L  +V+EVG 
Sbjct: 350 HHGHVARMKAAMAALGINPDKLDVVLFQLVRLYRNGEIARMSKRTGKSISLMDLVEEVGR 409

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VR+    + +   LDFD     +QS ENPVFYVQYA+AR  S+F+    +       +
Sbjct: 410 DGVRYFFNTKASGSHLDFDLDLAVKQSNENPVFYVQYAHARICSMFK----LLESEGIKV 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              N I  E      EL+LI  L+EYP  +  +    EP +L  Y++D+AS FH  ++  
Sbjct: 466 PSANAIKAELLDKPEELELIRKLSEYPDEVRISAETLEPSRLTRYVHDVASTFHSFYNAC 525

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V+    +L   RL LV     ++ + L+++ + +P  M
Sbjct: 526 R-------VRGEEEELMQARLVLVDCTRIVVKNVLDLLSITAPERM 564


>gi|222056007|ref|YP_002538369.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782965|sp|B9M2S2|SYR_GEOSF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221565296|gb|ACM21268.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 561

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 188/587 (32%), Positives = 299/587 (50%), Gaps = 38/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + +   L        +       I+IE+P    HG  +TN AM+L++     P  +AE
Sbjct: 5   LRTLISQGLAGCYADGSLSSGEFPSIIIEKPAHADHGDFATNVAMLLAKAEKKAPRMVAE 64

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            +V+ +       + + IAG GFIN +L     R+ L  +   G EYG++ +G G K+ +
Sbjct: 65  TLVSHLADGSGVCEKIEIAGPGFINFHLKDEAWRQTLLEVDQIGFEYGKSGVGGGKKIQV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GDT+  L++ +G++VTRE+Y NDAG QI  LALSV  R 
Sbjct: 125 EFVSANPTGPLHIGHGRGAALGDTICRLLSATGWDVTREFYYNDAGQQIANLALSVQARC 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQA 240
                 +D   P   Y G Y+  V +    +         +    + + L  ++ ++V  
Sbjct: 185 F-GNGPDDPGWPSDGYQGEYIIDVARAYMARETVHADDQHVTAAGDPQDLEAIRRFAVAF 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +    DL A ++  D++  E D +      +  ++  L   G+ YE            
Sbjct: 244 LRREQDQDLAAFDVHFDVYSLESDLYA--DGSVERVVRRLVDSGHTYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  R+T   DD DR + KS G YTYF  D+AY   K+ERGF  ++   G+DH
Sbjct: 290 ----QDDALWLRTTSFADDKDRVMRKSGGGYTYFVPDVAYHLRKWERGFTRVVNEQGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              + R+ A   A+           +L ++V + R G  +K+SKRAG ++TLR ++DEVG
Sbjct: 346 HSTITRVRAGLQALDAGIPAGWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDLIDEVG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ RF  + RK    L FD    K++S +NPV+YVQYA+AR  SIF  A +      F 
Sbjct: 406 RDATRFFFVMRKPDSQLVFDIDLAKQKSLDNPVYYVQYAHARICSIFENAAEKG----FV 461

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +   + +  +   +  E+ ++  LA +P V+E +    EP+++A YL +LA +FHG ++ 
Sbjct: 462 VPGADGVNLDQLIEPEEMAIVKALAFFPEVVEGSAANFEPHRIANYLQELAGLFHGFYNK 521

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V   + +LT  RL L+  VA  + + LN++G+ +P +M
Sbjct: 522 NR-------VITEDSQLTAARLFLLKCVALTLKNALNLLGISAPEKM 561


>gi|256380151|ref|YP_003103811.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255924454|gb|ACU39965.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 550

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 190/582 (32%), Positives = 295/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A  +  ++    ++     ++   L   + IERPR+  HG  +TN A+  ++  G  P  
Sbjct: 4   AALAELVRATAVDVLSTRGLDPSALPAEVTIERPRNPEHGDYATNVALQTAKKAGTSPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            A  +   +  +  +  V +AG GF+NL L+P     I+  I+  G ++GR+ +  G ++
Sbjct: 64  FATWLAEALTSNDALSEVTVAGPGFLNLRLAPDAQAAIVREIITKGEDFGRSDLLAGRRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A  GD L  ++A SG +VTREYY NDAGAQI+    S+  
Sbjct: 124 NLEFVSANPTGPLHLGGTRWAATGDALGRVLAASGADVTREYYFNDAGAQIDRFVRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  E+  +    L     E    + +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGSYISDIAAEVLRQEPDALT---AEDGPEVFRRIGVNLMFD 234

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+ DL       D+F  ED  H+     +   ++ L                K + K  
Sbjct: 235 EIKRDLHDFGTDFDVFFHEDSLHK--SGAVTTAVEKL----------------KGSDKLY 276

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      RST  GDD DR ++KSDG+  Y A D+AY   K  RGFD  IY++G+DH GY
Sbjct: 277 FENGAWWLRSTEFGDDKDRVVIKSDGAPAYIAGDIAYLVDKRSRGFDLCIYMLGADHHGY 336

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L  DG P++MSKRAG+ I++  +VD VG D+ R
Sbjct: 337 IGRLKAAAAALGDDPDSVEVLIGQMVNLVSDGKPVRMSKRAGNIISMEDLVDAVGVDAAR 396

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F M+       +D D   ++++S ENPV+YVQYA++R  S+ R A+ +  + +  L    
Sbjct: 397 FAMIRASVDSSVDIDLDLLRKRSSENPVYYVQYAHSRICSVLRNAEALKVEANDSL---- 452

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +     +E  LI  L E+PRV++ A   +EP+++A YL+ LA   H  + H     
Sbjct: 453 ----QLLDSEAEGTLIRALGEFPRVVKAAAELREPHRVATYLHSLAGDLHRWYDHKPALR 508

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L        +L   RL+L  A   +  +GL ++GV +P  M
Sbjct: 509 ILPRGDEEPTELHGARLRLCQATQRVFANGLALLGVTAPERM 550


>gi|120602858|ref|YP_967258.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166232782|sp|A1VEG5|SYR_DESVV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120563087|gb|ABM28831.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 551

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 198/579 (34%), Positives = 318/579 (54%), Gaps = 32/579 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             +L   L++I   + +     ++  I+ P+    G L+ N A++L++  G +P  +A  
Sbjct: 4   KKQLLAALQDIVKDMGL--AWPEKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATR 61

Query: 68  IVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I   ++  D D+ ++ IAG GF+N+  S  + R+ +     +G  +G +  G G KV +E
Sbjct: 62  IADALRNRDADITAIDIAGPGFLNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A VGD+LA +M F+GY+V+ EYYINDAG Q+  L LSV+ R +
Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYINDAGRQMRLLGLSVWVRAK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L      LPE +Y G Y+K + +EL +K    LL+  +         Y++ +++  I+
Sbjct: 182 E-LAGRPVTLPEDFYRGDYIKDIARELMEKE-PGLLDLDDAAGEDRCFAYAMNSILDGIK 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    ++H ++ SE     G    +    + L   G  +E                  
Sbjct: 240 QDLADFRVEHQVWFSERSLVEG--GAVEKTFNRLKEAGLAFE----------------QD 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FR+T  GDD DR L KSDG+ TYF++D+AY   KY+RGFD ++ + G+DH GY+ R
Sbjct: 282 GALWFRTTDFGDDKDRVLRKSDGTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A  AA+  K    +V+L +LV L R G  + MS RAG F TL  VV E G+D+ RFM 
Sbjct: 342 MRAAVAALGRKPEAFDVVLIQLVNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK+++ +NPV+YVQYA+AR  S+ R+A +   ++   L   ++ P
Sbjct: 402 LSRKSDSPLDFDLELVKQRTMDNPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAP 461

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E++L+  L  +   +  A  A  P+ ++ YL ++A   H +++      R  
Sbjct: 462 LSG---DDEMELLRLLDRFEETVAGAATALAPHHISHYLMEVAGALHSYYA------RQP 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A  + + + RL L+ AV  ++ +GL+++GV +P  M
Sbjct: 513 ILNATEQDVIVPRLALLRAVGCVLANGLSLLGVSAPESM 551


>gi|220933450|ref|YP_002512349.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782990|sp|B8GU79|SYR_THISH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219994760|gb|ACL71362.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 586

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 199/615 (32%), Positives = 307/615 (49%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + ++  +  +     +       + + R +D AHG  +TN A+ L++P    P 
Sbjct: 1   MKDQLQALIEQAIDALRQDGTLPGDTAVDVQVTRTKDKAHGDFATNVALQLAKPARKKPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IVAR+     V    IAG GFINL+L       ++++I   G  YGR+ +G G K
Sbjct: 61  DVAEAIVARLPASGLVARTEIAGPGFINLFLGEQAKLSVIATIREQGERYGRSQLGAGKK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G  +A L+   G++V REYY+NDAG Q++ L  SV+
Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGAAVADLLEAVGFDVHREYYVNDAGRQMDILGTSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--------------- 227
            RY + L   +   P   Y G Y+  +   L  ++         E               
Sbjct: 181 LRYLE-LTGVELPFPTNAYRGDYVYDIAATLHREHGDHYKREAAEILDGLPPDEPDGGDK 239

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                 V +  +  ++  IRDDL    + +D + SE      D 
Sbjct: 240 EEYIDAMIARAKELLGDNHYRFVFELGLNVILDDIRDDLAEFGVTYDTWYSERSL--TDK 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I+ L   G++YE                    L FRST  GD+ DR + + +G 
Sbjct: 298 GAVNLAIERLREAGHLYE----------------KDGALWFRSTDFGDEKDRVVQRDNGQ 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   K ERG+D +I V G+DH GYV R++A   A+ E + +++VLL +   
Sbjct: 342 TTYFASDIAYHMDKMERGYDRVIDVWGADHHGYVPRVKAALKALGEDETRLDVLLVQFAI 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR G  ++MS R+G F+TLR + +EVG D+ RF  + R+  + LDFD    K QS +NP
Sbjct: 402 LYRGGERVQMSTRSGSFVTLRELREEVGKDAARFFYVMRRCEQHLDFDLDLAKSQSADNP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+ RQ +      D               ++ E +++  LA +P VIE
Sbjct: 462 VYYIQYAHARVCSVLRQMEAKGLKHDPS---HGEAKLSLLTESHEQEILATLARFPEVIE 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A + +EP+++A YL +LA+ FH +++  +          +   +   RL L+ AV  +I
Sbjct: 519 AAALVEEPHQIANYLRELANDFHTYYNAHQF-------LVDEPAIRDARLSLILAVRQVI 571

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 572 ANGLGLLGVSAPQEM 586


>gi|46579659|ref|YP_010467.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81566897|sp|Q72CN5|SYR_DESVH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46449074|gb|AAS95726.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233457|gb|ADP86311.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 551

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 198/579 (34%), Positives = 318/579 (54%), Gaps = 32/579 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             +L   L++I   + +     ++  I+ P+    G L+ N A++L++  G +P  +A  
Sbjct: 4   KKQLLAALQDIVKDMGL--AWPEKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATR 61

Query: 68  IVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I   ++  D D+ ++ IAG GF+N+  S  + R+ +     +G  +G +  G G KV +E
Sbjct: 62  IADALRNRDADITAIDIAGPGFLNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A VGD+LA +M F+GY+V+ EYYINDAG Q+  L LSV+ R +
Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYINDAGRQMRLLGLSVWVRAK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L      LPE +Y G Y+K + +EL +K    LL+  +         Y++ +++  I+
Sbjct: 182 E-LAGRPVTLPEDFYRGDYIKDIARELMEKE-PGLLDLDDAAGEDRCFAYAMSSILDGIK 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    ++H ++ SE     G    +    + L   G  +E                  
Sbjct: 240 QDLADFRVEHQVWFSERSLVEG--GAVEKTFNRLKEAGLAFE----------------QD 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FR+T  GDD DR L KSDG+ TYF++D+AY   KY+RGFD ++ + G+DH GY+ R
Sbjct: 282 GALWFRTTDFGDDKDRVLRKSDGTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A  AA+  K    +V+L +LV L R G  + MS RAG F TL  VV E G+D+ RFM 
Sbjct: 342 MRAAVAALGRKPEAFDVVLIQLVNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK+++ +NPV+YVQYA+AR  S+ R+A +   ++   L   ++ P
Sbjct: 402 LSRKSDSPLDFDLELVKQRTMDNPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAP 461

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E++L+  L  +   +  A  A  P+ ++ YL ++A   H +++      R  
Sbjct: 462 LSG---DDEMELLRLLDRFEETVAGAATALAPHHISHYLMEVAGALHSYYA------RQP 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A  + + + RL L+ AV  ++ +GL+++GV +P  M
Sbjct: 513 ILNATEQDVIVPRLALLRAVGCVLANGLSLLGVSAPESM 551


>gi|332703861|ref|ZP_08423949.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554010|gb|EGJ51054.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 553

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 215/577 (37%), Positives = 339/577 (58%), Gaps = 30/577 (5%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            LK  L+E    + +   +   + +E P+D   G L+TNAAMIL++  G  P  +A  + 
Sbjct: 6   HLKKLLEEAVTTMGL--SLPQGVSLEPPKDIKFGDLATNAAMILAKQAGKPPREVAAELR 63

Query: 70  ARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            R+    P+++ + +AG GF+N   +PS+ + IL  ++  G  +G   +G+  KV +E+V
Sbjct: 64  ERLLGSHPEIERIEVAGPGFLNFSFAPSFWQSILQDVLEQGDRFGALDVGQKKKVLVEYV 123

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+H+GH R A +GD+L  ++ F+G++VT E+YINDAG Q+  L +S++ RYQQA
Sbjct: 124 SANPTGPLHLGHGRGAALGDSLVRVLRFAGFDVTTEFYINDAGRQMRLLGMSIWVRYQQA 183

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
            +N D +LPE  Y G Y+K +  E+A  + SELL  PE + + + +++ + +++K I+ D
Sbjct: 184 -FNRDVELPEDSYRGEYIKDIAAEIAASHGSELLQVPEAQAMDVCREHGMLSILKWIKRD 242

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L    + HDI+ SE      D   +   I  L  +G  YE                    
Sbjct: 243 LNEFRVSHDIWFSERRLV--DTGQVESTIKWLQDKGLAYE----------------QEGA 284

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L F ST  GDD DR L +S G  TYFA+D+AY   KY RG+D ++ + G+DH GYV R++
Sbjct: 285 LWFNSTRFGDDKDRVLRRSSGELTYFASDIAYHADKYSRGYDLLVDIWGADHHGYVPRMK 344

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A A A+ +   Q+ V+L ++V + R G  I MSKRAG F TL  VV EVG DS RFM + 
Sbjct: 345 AAAQALGKDADQLQVVLVQMVNILRGGEQISMSKRAGTFETLADVVKEVGVDSARFMFMT 404

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           RK+   LDFD   VK+QS +NPV+YVQYA+AR RS+FR+A++    L   +    ++   
Sbjct: 405 RKSDSHLDFDLELVKQQSMDNPVYYVQYAHARIRSVFRKAREQGLALQPTVDRSKLMAL- 463

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                 ++QL+  +  +P  ++ A  +  P+ ++F+L +LA++ H ++S        + +
Sbjct: 464 -LDTPEDIQLLKLMEHFPDAVDAAAKSLSPHHISFFLRELAALLHRYYSVH------KVL 516

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            A + +LT+ RL L+ AVA ++ +GL ++GV +P +M
Sbjct: 517 GAESSQLTLARLLLLDAVAQVLRNGLQLLGVNAPEQM 553


>gi|126666725|ref|ZP_01737702.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628770|gb|EAZ99390.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 578

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 189/586 (32%), Positives = 299/586 (51%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++ L  +  +  +         I   +D +HG  + N A++ ++  G  P  +AE
Sbjct: 22  VSDLLQSALAALQSEGVLPADQNFAPQIGNTKDKSHGDYACNIALVAAKFAGCAPRKLAE 81

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +     VD V IAG GFIN ++S +    ++++ +    ++GRN  GKG KV +E
Sbjct: 82  ALVANLPASAAVDKVEIAGPGFINFFMSTASAFGVVNAALEQAEDFGRNHSGKGEKVQVE 141

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD +  L+  +GY+VTRE+Y NDAGAQIN L LSV  R  
Sbjct: 142 FVSANPTGPLHVGHGRGAAIGDCICRLLDANGYQVTREFYYNDAGAQINNLGLSVQAR-V 200

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L  +    PE  Y G Y+  V +              +    E   L  + +++V  +
Sbjct: 201 KGLTPDHQSWPENGYRGDYIADVAEAYLAGKTITADERSVTGQAEPDNLEAITNFAVAYL 260

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  ++ D++  E   +  +   +   +  L   GY YE             
Sbjct: 261 RREQDLDLKAFGVEFDVYFLESSLY--NDGKVEATVKRLQENGYTYE------------- 305

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              D   L  ++T  GDD DR + K+DG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 306 ---DGGALWLKTTEFGDDKDRVMRKTDGGYTYFLPDVAYHLDKWQRGFSTVINEQGADHH 362

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A   A+     +   + +L ++V + R G  +K+SKRAG ++TL  +++EVG 
Sbjct: 363 STVTRVRAGLQALNIGIPEGWPDYVLHQMVMVTRGGEEVKLSKRAGSYVTLSDLIEEVGR 422

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R+    L FD    + Q+ ENPV+Y+QYA+AR  S+ R+            
Sbjct: 423 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYIQYAHARICSVLRKLAVEGVQRGR-- 480

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              ++          E +L   LA+YP ++ +A   +EP+ L+ YL +LA +FH +++  
Sbjct: 481 -HESLGDLTLLTLDEEKELANQLAKYPELVASAAAQREPHTLSQYLRELAGLFHSYYNAH 539

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V   +  L   R+ L  AV  +I +GL+++GV +P EM
Sbjct: 540 K-------VLIEDTALRDARISLYLAVRQVIENGLDLLGVSAPEEM 578


>gi|51891157|ref|YP_073848.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81389886|sp|Q67TI9|SYR_SYMTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51854846|dbj|BAD39004.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 558

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 189/589 (32%), Positives = 314/589 (53%), Gaps = 35/589 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPL 57
           M +     S ++  L +   +      ++     + +E P+   HG  +TN AM+++R  
Sbjct: 1   MRIVEQIKSEIRQALADAVSRAVAAGALVGPAPEVFLETPKAREHGDFATNLAMVMARQE 60

Query: 58  GLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              P  IA+ IV  ++ +    +S  IAG GFINL L   ++ ++L +I   G +YG++ 
Sbjct: 61  KKAPRVIAQAIVDHLQTEGTWIESAEIAGPGFINLRLRQGWVHQVLPAIQAEGADYGKSD 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
            G   ++ +E+VSANPTGPM +   R    G +LA L+ ++GYE   E+Y+NDAG Q+  
Sbjct: 121 HGGKQRILLEYVSANPTGPMVLVQARAGAFGSSLARLLNWAGYECHTEFYVNDAGNQVKI 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           LA +V  R Q+ L     ++PEGYYPG  +    + L ++Y    L  PEE+ L  ++ +
Sbjct: 181 LARTVDLRAQE-LRGATVEIPEGYYPGEDVIDCARALLEQYPD-FLEKPEEERLAFLERW 238

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +         L++  ++ D + SE      +      +++ L  +G  YE        
Sbjct: 239 APEYFRSGHERVLRSYGVEFDRWFSERSL--REAGAPARLVEWLKERGEAYE-------- 288

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       +  R+T  GDD DR L+KSDG YTYFAAD  Y K KY+RG+  +I ++
Sbjct: 289 --------KDGAVWMRTTAYGDDKDRVLVKSDGEYTYFAADACYHKDKYDRGYATLIDIL 340

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G DH GY+ R++A+   +   +  + +L  ++VRL++DG   +MSKR G+++TL  ++++
Sbjct: 341 GQDHHGYLGRMKAMVECLGHPRDSLEILFTQMVRLFKDGQEFRMSKRRGNYVTLEDLLEQ 400

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           V  D+ R+  L R     +DFD      +S +NPVFYVQYA+AR  SI RQA++      
Sbjct: 401 VSVDAARYFFLMRSLDTHMDFDLDLANLKSSDNPVFYVQYAHARICSILRQAREQG---- 456

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            ++   + +      D SE++L+  LAE+P  I  A  A+E +++  YL +LA++FH  +
Sbjct: 457 LEVPAASEVDTALLADESEVELMRKLAEFPEEIIGAADAREVHRIPRYLNELATLFHQFY 516

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S  R       V +++  L+  RL LV    +++ + L I+GV +P  M
Sbjct: 517 SRCR-------VVSDDVPLSRARLLLVDCTRTVLANALGILGVSAPERM 558


>gi|169351390|ref|ZP_02868328.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552]
 gi|169291612|gb|EDS73745.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552]
          Length = 553

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 205/581 (35%), Positives = 324/581 (55%), Gaps = 35/581 (6%)

Query: 7   FSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + LKN LK  I  +  VE    + I+IE PRD  HG  STN AM L++ L  +P  IA
Sbjct: 6   IEATLKNVLKKAIISRGFVEDYDQENIIIEIPRDKTHGDYSTNLAMQLTKLLKRNPREIA 65

Query: 66  ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             IV  I K   +++ + IAG GFINL+L+   +  I+  ++     YG++  G G K N
Sbjct: 66  TAIVEAIDKETANIEKIEIAGPGFINLFLAKDAMTSIIKEVLDEKENYGKSNYGNGIKYN 125

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTG +H+GH + A VGD++  +M  +GY+VTREYYINDAG QI+ LALS++ R
Sbjct: 126 VEFVSANPTGDLHLGHAKGAAVGDSICRIMEAAGYDVTREYYINDAGNQIHNLALSLYAR 185

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           YQQA +  +  +PE  Y G  +  +  ++ +    + L  PE+K +   +    +  ++ 
Sbjct: 186 YQQA-FGKEVTMPEDGYHGKDIIDIANKIKEIEGDKYLGLPEDKAIAYFRAKGTEYELQK 244

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+D L    +  D++ SE   +  + + +   I+ L   GY YE                
Sbjct: 245 IKDILNEFRVSFDVWFSETSLY--EENKVVPTIEKLKEAGYTYE---------------- 286

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   L F+ST  GDD +R L+KSDGSYTY   D+AY   K +RG++ ++ ++G+DH GY+
Sbjct: 287 EDGALWFKSTEFGDDKNRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A   A+     Q+N+ + ++VR+  +G P+KMSKR G+ +T++ +++E+G D+ R+
Sbjct: 347 NRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + +  +   DFD    K  S ENPV+Y QYA+AR  SI  QA     D          
Sbjct: 407 FFVSKAANTPFDFDIGLAKSHSNENPVYYAQYAHARMCSIKTQADKAKIDYSDKF----- 461

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              +   +  E++L+ H+ E+  VI ++ I + P+K+A Y+  LA +FH  ++       
Sbjct: 462 ---DLLVNNKEIELVKHINEFRNVIVDSAINRAPHKIANYIQRLAQLFHSFYNECY---- 514

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  NN +L+  RL LV A    + + LN+IGV +P +M
Sbjct: 515 --VIDENNIELSKQRLSLVEATRITMANALNLIGVSAPEKM 553


>gi|220917531|ref|YP_002492835.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782939|sp|B8JBE2|SYR_ANAD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219955385|gb|ACL65769.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 598

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 230/596 (38%), Positives = 344/596 (57%), Gaps = 28/596 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
              R+    ++   +   + +         +E PRD  HG  + NAAM+L++  G  P  
Sbjct: 2   VRDRVIELFRKALAQGADDGRWPAAGAGFSVEAPRDPKHGDFAVNAAMVLAKQAGRPPRE 61

Query: 64  IAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           +A+ IV  +       D+  + IAG GFIN+ LSP    + L+  V  G +YGR  +G+G
Sbjct: 62  LAQAIVEAVRAADTAGDLAGLEIAGPGFINVRLSPDLWLRTLARAVAEGPDYGRTAVGQG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+VSANPTGPMHVGH R AVVGD +  L+ ++G++VTREYY+ND GAQ+ TLA S
Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQGLLRWAGFDVTREYYVNDYGAQVQTLARS 181

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RYQ+ L+     +P   YPG Y+K +   L  +Y +  L+ PE +WL + +D+SVQ 
Sbjct: 182 VHLRYQE-LHGRTVTMPPKSYPGEYVKDIAAGLKAEYGARFLDAPEAEWLTLFRDHSVQH 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-- 298
           ++ +IR DL A+NI  D + SE   +  +   +   +  L  +  VY G LPPPKSK   
Sbjct: 241 VLGMIRGDLAAVNISFDRWSSEKALY--ESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQ 298

Query: 299 --------TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                    +         LFRS+  GD+VDRP+ K+DG+ TYF AD+AY   K +R  D
Sbjct: 299 PPPQPQPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYFCADIAYHWDKRQR-AD 357

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++ V+G+DH GYV RLEA   A+   +  ++V+L ++V L R G  +KMSKRAG  ++L
Sbjct: 358 ALVDVLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSL 417

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R VVDEVG D+ RF+ L R++   LDFD    K Q+ +NPVFYVQY +AR  +IF++A++
Sbjct: 418 REVVDEVGRDATRFIFLTRRSDAPLDFDVELAKRQTLDNPVFYVQYGHARLAAIFQKARE 477

Query: 471 IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               + DFDL     +         E  LI  +A +P ++  A +A EP+++AFYL +  
Sbjct: 478 AGHAVPDFDLEAARTLA-----SPEEQDLIRRIAAFPDMLAAAALAYEPHRVAFYLQETI 532

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  ++ G+++     V   +   T  RL L  A+  ++ +GL ++GV +P+ M
Sbjct: 533 AAFHSWYTQGKKSGEK--VIGPDPVKTAARLFLCRALKQVLANGLAVLGVSAPDRM 586


>gi|78043915|ref|YP_358996.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|109894979|sp|Q3AFT8|SYR_CARHZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77996030|gb|ABB14929.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 557

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 197/585 (33%), Positives = 320/585 (54%), Gaps = 31/585 (5%)

Query: 2   YLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           YL    +  +   L+    K   ++ +      +E+P++ AHG L+TN AM+L++    +
Sbjct: 3   YLLQRITGEIAGSLRRAAVKAGYLDAEDELAFELEKPKEKAHGDLATNLAMLLTKKARKN 62

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  ++  ++I   V+ V IAG GFIN Y    ++  ++  I+  G +YGR  IG G
Sbjct: 63  PREIAATLLEYLEIPAVVERVEIAGPGFINFYFKKDWVVAVIPEILSFGEKYGRLAIGAG 122

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +EFVSANPTG +H+G+ R A +GD LA+++  +GYEV+REYYINDAG QI     S
Sbjct: 123 KRVQVEFVSANPTGLLHMGNGRGAALGDILANILTEAGYEVSREYYINDAGNQIENFNKS 182

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY + L     + PE  Y G  +    + +  ++    ++ PE++    +   +++ 
Sbjct: 183 VEARYLELL-GYKVEFPEEGYHGEDIIDTARNIVARFGDRFIHLPEKERQEALGKIALEE 241

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ I+  L+   +++D++ SE   H  +   +   +  L  +GY+YE            
Sbjct: 242 KLQSIKKSLENFGVKYDVWFSERSLH--ESGEVEKTVKLLLERGYLYE------------ 287

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L F ++ +G++ D  L++ +G  TY+AAD+AY K K++RGFD +I + G+DH
Sbjct: 288 ----KDGALWFAASKLGEEKDEVLVRKNGVPTYYAADIAYHKNKFDRGFDLVINIWGADH 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V R++    A+     ++ V+L +LVRL++ G  ++MSKR G +ITL  +V+EVG D
Sbjct: 344 HGHVSRMKTALKALGYDPERLIVILMQLVRLFQGGELVRMSKRTGQYITLDELVEEVGVD 403

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  + R +   LDFD    KE+S ENPV+Y+QYA+AR  S++RQ  +        L 
Sbjct: 404 AARYFFVMRSHDAHLDFDLDLAKEKSNENPVYYIQYAHARIMSLYRQCNEQG----VTLP 459

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P   +        +EL L+ HLAE+P  IE    A  P+ LA YL++LA  FH  ++  R
Sbjct: 460 PVEDVDLAILSSEAELNLLRHLAEFPVEIEKCATALAPHHLARYLHELAGYFHTFYNSCR 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V      L+  RL LV A   ++  GL ++GV +P +M
Sbjct: 520 -------VLGVEENLSKARLLLVEATRIVLRKGLKMLGVSAPEKM 557


>gi|258422795|ref|ZP_05685698.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257847026|gb|EEV71037.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 553

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHIAMIEAVRITLKNALAMVGVSAPESM 553


>gi|224370238|ref|YP_002604402.1| arginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|259511641|sp|C0QKZ8|SYR_DESAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|223692955|gb|ACN16238.1| ArgS [Desulfobacterium autotrophicum HRM2]
          Length = 555

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 201/579 (34%), Positives = 314/579 (54%), Gaps = 28/579 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +    +    K  ++      + IE PR  AHG  STN AM+ +    + P  IAE
Sbjct: 5   IKQLILGGARRAFDKGLLKSDEFPGMEIEAPRHEAHGDFSTNFAMVSAATQKMAPRKIAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +++ +  D  ++   IAG GFIN +L+       L  IV     +G +  G G KV +E
Sbjct: 65  AVISCMDSDSVIEKTEIAGPGFINFFLANRAWYPTLDRIVKEDDRFGSSDFGAGKKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD +A++++F+G++V REYYIND+G QI TL LSV+ R  
Sbjct: 125 FVSANPTGPLHVGHARGAAVGDAVANILSFAGFDVQREYYINDSGRQIRTLGLSVWLRLC 184

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   + + P   Y G Y+K +  +L  K   EL    E + + I   ++ Q ++  IR
Sbjct: 185 QQL-GREVEFPTDCYQGDYIKEIAADLHGKMGRELSEKDEAEAVSICAKFAAQVILSGIR 243

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL A  +++D + SE+  +      ++  I+    +  +YE                  
Sbjct: 244 ADLVAFGVEYDQWFSEESLYA--SGRVQKAIEEFKARDVIYE----------------KD 285

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
               FR+   GD+ DR +++++G  TYFA+D+AY   K++RGFD +I V G+DH GY+ R
Sbjct: 286 GAQWFRTERYGDEKDRVVVRNNGITTYFASDIAYHMEKFDRGFDRVIDVWGADHHGYINR 345

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   A   +  Q +V+L +LV L R+G P+ MS R+G+F+TL+ +VDEVG D+ RF+ 
Sbjct: 346 INAAIDASGRQSDQFDVILVQLVNLLRNGQPVAMSSRSGEFVTLKDIVDEVGKDAARFLF 405

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R     LDFD    K+++ +NPV+YVQY +AR   I  +A  +   +  +        
Sbjct: 406 LSRSYDSGLDFDLEVAKQKTSDNPVYYVQYVHARIAGILMKA--VSEKVLNEAEKPGAGN 463

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +E   +  E+ L+  LA +P  +E +     P+ +  YL  LAS FHG+++  +      
Sbjct: 464 RELLVEPEEINLLKILAAFPETVEKSAATLHPHVIFTYLMGLASAFHGYYNRHK------ 517

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   +R+L+  R+ LV AV ++I +GLN++GV +P  M
Sbjct: 518 -VITPDRELSRGRISLVFAVKTVIRNGLNLLGVSAPERM 555


>gi|21282300|ref|NP_645388.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|57650073|ref|YP_185547.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87162053|ref|YP_493299.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194381|ref|YP_499174.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220791|ref|YP_001331613.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161508858|ref|YP_001574517.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141554|ref|ZP_03566047.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253732951|ref|ZP_04867116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|258450930|ref|ZP_05698982.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049698|ref|ZP_06022565.1| arginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051928|ref|ZP_06024142.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282921898|ref|ZP_06329596.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023632|ref|ZP_06378030.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294849263|ref|ZP_06790006.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|297208668|ref|ZP_06925096.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912759|ref|ZP_07130201.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304381781|ref|ZP_07364429.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|23822182|sp|Q8NXT8|SYR_STAAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71153571|sp|Q5HI60|SYR_STAAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109895038|sp|Q2FJ29|SYR_STAA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123291835|sp|Q2G0F8|SYR_STAA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|172048787|sp|A6QER9|SYR_STAAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083553|sp|A8Z117|SYR_STAAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21203737|dbj|BAB94436.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|57284259|gb|AAW36353.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87128027|gb|ABD22541.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201939|gb|ABD29749.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373591|dbj|BAF66851.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160367667|gb|ABX28638.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253729131|gb|EES97860.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257861350|gb|EEV84159.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259160185|gb|EEW45215.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162241|gb|EEW46816.1| arginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940186|emb|CBI48563.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282593751|gb|EFB98742.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294823795|gb|EFG40221.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|296886613|gb|EFH25518.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885863|gb|EFK81066.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302750507|gb|ADL64684.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339732|gb|EFM05678.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315196545|gb|EFU26894.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140058|gb|EFW31919.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|329313330|gb|AEB87743.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329729920|gb|EGG66312.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 553

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|320141851|gb|EFW33679.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 553

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 198/586 (33%), Positives = 311/586 (53%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+ SE+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-SEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|306781626|ref|ZP_07419963.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002]
 gi|306784014|ref|ZP_07422336.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003]
 gi|306788377|ref|ZP_07426699.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004]
 gi|306792704|ref|ZP_07431006.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005]
 gi|306797110|ref|ZP_07435412.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006]
 gi|306802990|ref|ZP_07439658.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008]
 gi|306807180|ref|ZP_07443848.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007]
 gi|306967379|ref|ZP_07480040.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009]
 gi|308325587|gb|EFP14438.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002]
 gi|308331249|gb|EFP20100.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003]
 gi|308335065|gb|EFP23916.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004]
 gi|308338873|gb|EFP27724.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005]
 gi|308342558|gb|EFP31409.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006]
 gi|308346421|gb|EFP35272.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007]
 gi|308350364|gb|EFP39215.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008]
 gi|308354993|gb|EFP43844.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009]
          Length = 550

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 295/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L+  +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLANKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 64  LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+ ++ +++  K     L+ P+ +     +   V  M  
Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H G    + + I  L   G +YE               
Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENP +YVQYA+AR  ++ R A ++    D +     
Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPAYYVQYAHARLSALARNAAELALIPDTNHL--- 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV+E A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL IIGV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550


>gi|297539933|ref|YP_003675702.1| arginyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297259280|gb|ADI31125.1| arginyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 551

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 193/587 (32%), Positives = 303/587 (51%), Gaps = 44/587 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L      I  E +    I++ERP+   HG  +TN A++L++PL  +P  IA 
Sbjct: 1   MKTHLTQLLTAAAKTIAPEFE--ATILLERPKSAEHGDFATNLALVLAKPLKQNPRAIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +     +    IAG GFIN +L+    + +++ I+ +G  YGRN IG G KV +E
Sbjct: 59  QIIEALPASDYIAKTEIAGAGFINFFLNAQSQQAVVTDILKAGENYGRNNIGSGQKVQLE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD LA L+  +G++VTRE+Y NDAGAQI+ L +SV  R  
Sbjct: 119 FVSANPTGPLHVGHGRGAAVGDCLARLLDANGWDVTREFYYNDAGAQIDNLTISVLARC- 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-----WLPIVKDYSVQAM 241
           + +  +D+  PE  Y G Y+  +     +K +    +              V+ ++V  +
Sbjct: 178 KGIPTDDASFPENGYRGDYIMDIANAFLNKETVTADDMQVTANGDITDEDAVRTFAVAYL 237

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DLKA  I+ D+F  E   +      + + +  L + G+ Y+             
Sbjct: 238 RHEQDLDLKAFQIKFDVFSLESALY--SEGKVEETVQALIKSGHTYDL------------ 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++T  GDD DR + KS+G YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 284 ----DGALWLKTTDFGDDKDRVMRKSEGGYTYFVPDVAYHAEKWKRGFVRVINEQGADHH 339

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A   A+         + +L ++V + R G  +K+SKRAG ++TLR +++EVG 
Sbjct: 340 STITRVRAGLQALDAGIPSGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478
           D+ R+ +  R++   L FD    + Q+ +NPVFY+QYA+AR  S+  Q   +   L D D
Sbjct: 400 DATRYFLAARRSDSQLVFDIDLARAQTNDNPVFYIQYAHARICSVLAQWGGVAAQLNDVD 459

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P N        +  E  L+  L+ YP  + NA     P+ +A YL DLAS  H +++ 
Sbjct: 460 LSPLN--------NPHETALMQRLSSYPETVANAATELAPHVIANYLKDLASDLHSYYNE 511

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           +  + + RL L+ A   ++ +GL ++GV +P +M
Sbjct: 512 YKF-------LIEDETVKLARLSLISATQQVLKNGLGLLGVSAPEKM 551


>gi|282915944|ref|ZP_06323709.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283769772|ref|ZP_06342664.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282320240|gb|EFB50585.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283459919|gb|EFC07009.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 553

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 457 --AATNDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|108800862|ref|YP_641059.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870002|ref|YP_939954.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123368893|sp|Q1B531|SYR_MYCSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232810|sp|A1UK06|SYR_MYCSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|108771281|gb|ABG10003.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696091|gb|ABL93164.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 550

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 191/582 (32%), Positives = 287/582 (49%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +  +  ++   L   + +ERPR+  HG  +TN A+ + + +G++P  
Sbjct: 4   ADLADLLRTTATAVLTERDLDTAALPATVTVERPRNPEHGDYATNLALQVGKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GF+NL +  +    I+  I+ S   YG +       +
Sbjct: 64  LAGWLAEALTATAGIASAEVAGPGFVNLRIEAAAQNVIVGDIITSAERYGHSAALAERNI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+A  G  V REYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLATQGAAVVREYYFNDHGAQIDRFVSSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K     L  P+++     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGSYIGDIAAQVLAK-DPGALELPDDEMRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D+F  ED  H      + + I  L   G +YE               
Sbjct: 237 HIKISLHDFGTDFDVFTHEDSMHT--SGRVEEAIARLRENGAIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T  GDD DR ++KSDG+  Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTTDFGDDKDRVVIKSDGAPAYIAGDLAYFLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + V++ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGDDPDTVEVMIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A D+    D       
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAADLGVVAD------- 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +      E  LI +L E+PRV+E+A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 452 TAHLDLLTHDKEGTLIRNLGEFPRVLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEAPGSLHQARLALCQATRQVIANGLAILGVSAPERM 550


>gi|148259959|ref|YP_001234086.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401640|gb|ABQ30167.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 596

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 256/597 (42%), Positives = 366/597 (61%), Gaps = 18/597 (3%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +F      +   +  +     ++ ++  RI +   R+ AHG ++TNAA+I ++PLG  P
Sbjct: 4   NIFTALRRLILAEMARLFPA--LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPP 61

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA  + A +   PD+     AG GF+NL L+       +++I+ +G  +G + +G+G 
Sbjct: 62  REIATALAAALSALPDIAKAEPAGPGFVNLTLADPVWHAEIAAILRAGEAFGASAMGQGR 121

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +VN+E+VSANPTGP+ VGHCR AVVGD LASL+A +GY+VTREYYINDAGAQ+  LA SV
Sbjct: 122 RVNVEYVSANPTGPLTVGHCRGAVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSV 181

Query: 182 FWRYQQALYNNDSD------LPEGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKW 229
           +WRY QAL    ++       P G  YPG YL  V + L   +   L        P E W
Sbjct: 182 YWRYLQALGTQLTEQDFAAATPTGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAW 241

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  V+ +++++MM +IR+DL ALN++ D+F SE          +      L  Q  +YEG
Sbjct: 242 LDTVRRHAIESMMALIREDLAALNVRQDVFTSEAALIA--AGGVERAEAILRGQDLLYEG 299

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +L PPK KT +  +  R+Q LFR+T  GDDVDRP+ KSDGS TYF  D+A    K  RGF
Sbjct: 300 VLEPPKGKTPEDWE-PREQTLFRATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGF 358

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D MI V G+DH GYVKR++A   A++  + A ++++LC++VR+ +DG P++MSKRAG +I
Sbjct: 359 DTMIDVWGADHGGYVKRMQAAVKALAAGRDASLDIVLCQIVRVMKDGTPMRMSKRAGTYI 418

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            LR ++D VG D VRF+ML RK+   ++FD      Q++ENPVFYVQYA+ARCRS+ R A
Sbjct: 419 ELRDLIDAVGPDVVRFIMLMRKSDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAA 478

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            ++    D            S     EL L+  LA +PR++E+A  A+EP+++ F+LYDL
Sbjct: 479 AEMPELGDTADAALAEAALASLTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDL 538

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  FH  W+ GR +  LRF+QA+  + +  RL LV A A +I SGL ++GV    EM
Sbjct: 539 AGDFHALWNAGRADATLRFIQADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595


>gi|298693939|gb|ADI97161.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 553

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGYVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|58584465|ref|YP_198038.1| arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75498018|sp|Q5GT78|SYR_WOLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|58418781|gb|AAW70796.1| Arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 565

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 254/585 (43%), Positives = 366/585 (62%), Gaps = 21/585 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L ++   +      +   ++E P + AHG + TN AM+L++     
Sbjct: 1   MNIFKRISSLILSKLDKLKQGV----SSVTNFIVEPPSNRAHGDIYTNIAMVLAKHEKKK 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++     +  ++  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 57  PVEIAEVLAKEFALFDEIARVEIAGPGFINMHLKIEVWHGILEQINELKTEFGTLNIGNN 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD L +L+   GY VT+EYYINDAGAQI+TL  S
Sbjct: 117 QAINVEFVSANPTGPLHIGHARGAVFGDVLTNLLKKVGYRVTKEYYINDAGAQIDTLVRS 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL      + +G YPG YLK +G+ELA KY  ELL   E++   ++++Y++ +
Sbjct: 177 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEELAKKYGRELL---EKQDNRVIREYTLSS 232

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++ +  L + HD+F SE +  +     I   I  L+ +G VYEG L  PKSK ++
Sbjct: 233 ILELIKEGMNLLGVSHDVFTSEYELQK--SGKIEKSIKLLSDKGLVYEGYLEKPKSKESE 290

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K DGS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 291 NWT-SRKEMLFRSTEFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVALGSDH 349

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+KRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T+R VV+EVG D
Sbjct: 350 GGYIKRLKAVISALSDNQAKIEVKLHNVVNFFENGKPVKMSKRSGNFLTVRDVVEEVGRD 409

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+ R  S+ R A    P  +  L 
Sbjct: 410 ITRFIMLTRKNDMVLDFDFTKVKEQSKDNPIFYVQYAHVRAHSLMRNAPKELPKANPSLL 469

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             N           EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 470 KTNG----------ELFLIKTLAKWPDVVETAARLCEPHRITFYLLEVAEAFHILWGYGK 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +RF+  +N  LT  R+ LV A+  +I SGL++  +E   EM
Sbjct: 520 SDLNMRFILEDNPNLTAARMFLVQALVHVIASGLSMFNIEPLEEM 564


>gi|49482837|ref|YP_040061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424726|ref|ZP_05601153.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427395|ref|ZP_05603794.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430027|ref|ZP_05606411.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432729|ref|ZP_05609089.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435633|ref|ZP_05611681.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282903199|ref|ZP_06311090.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904986|ref|ZP_06312844.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907943|ref|ZP_06315777.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910251|ref|ZP_06318055.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913444|ref|ZP_06321233.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918397|ref|ZP_06326134.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282923362|ref|ZP_06331042.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283957408|ref|ZP_06374861.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500491|ref|ZP_06666342.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509436|ref|ZP_06668147.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293524023|ref|ZP_06670710.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427150|ref|ZP_06819786.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590501|ref|ZP_06949140.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|56749422|sp|Q6GJ61|SYR_STAAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49240966|emb|CAG39634.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272296|gb|EEV04419.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275588|gb|EEV07061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279224|gb|EEV09825.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282144|gb|EEV12279.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284824|gb|EEV14943.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282314230|gb|EFB44620.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317531|gb|EFB47903.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282322476|gb|EFB52798.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325643|gb|EFB55951.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328188|gb|EFB58467.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331811|gb|EFB61322.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596154|gb|EFC01115.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790859|gb|EFC29674.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920986|gb|EFD98047.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095496|gb|EFE25757.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467533|gb|EFF10048.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295128938|gb|EFG58568.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576800|gb|EFH95515.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438970|gb|ADQ78041.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193977|gb|EFU24371.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|323439428|gb|EGA97150.1| arginyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442112|gb|EGA99746.1| arginyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 553

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|332671324|ref|YP_004454332.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332340362|gb|AEE46945.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 560

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 202/589 (34%), Positives = 298/589 (50%), Gaps = 40/589 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A  S  L+  L               I   + +ERPR   HG  +TN AM L++  G +P
Sbjct: 4   AQLSEALRAALVHAVDDGTFALDPAAIPATVHLERPRQREHGDWATNVAMQLAKKAGTNP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              AE +  R+K    V SV +AG GF+N+ L  +   ++  SIV  G EYGRN    G 
Sbjct: 64  RAFAEELARRLKETSGVASVEVAGPGFLNIRLDAAAAGELARSIVEQGGEYGRNDTLAGV 123

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++N+EFVSANPTGP+H+G  R A VGD+LA ++  SG +V REYY ND GAQI+  A S+
Sbjct: 124 RLNLEFVSANPTGPLHIGGVRWAAVGDSLARVLQASGADVAREYYFNDHGAQIDRFARSL 183

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYS 237
             R          D PE  Y G Y+  + +++          +    P ++     +   
Sbjct: 184 VARAL------SEDAPEDGYGGSYITEIAEQVVADALAAGEPDPRTLPRDEATEAFRARG 237

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V+ M   I+  L    +  D++  ED  H  +   +   ++ L   G+V+E         
Sbjct: 238 VELMFAEIKQSLHDFGVDFDVYFHEDSLH--ESGAVEHAVERLRAGGHVFE--------- 286

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      +  R+T  GDD DR ++KSDG   Y + D+AY+  K ERGFD +I ++G
Sbjct: 287 -------QDGAVWLRTTDFGDDKDRVVIKSDGEGAYISGDIAYYLDKRERGFDRVILMLG 339

Query: 358 SDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +DH GYV R+ AV AA  +     + +L+ ++V L +DG P++MSKRAG  +T+  +VD 
Sbjct: 340 ADHHGYVGRMMAVCAAFGDTPHVNLEILIGQMVNLVKDGEPVRMSKRAGTVLTIDDLVDA 399

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ R+ +        +D D   +     ENPVFYVQYA+AR  SI R A D     +
Sbjct: 400 VGVDAARYSLARSSADSTIDLDLDLLASAKNENPVFYVQYAHARTASIGRNAVDAGVRKE 459

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D F  +++  E     SE  L+  LAE+PR++  A   +EP+++A YL DLA  FH  +
Sbjct: 460 -DGFDASLLDHE-----SEAVLLGQLAEFPRIVAQAAELREPHRVARYLEDLAGTFHKWY 513

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R    + F           RL LV A   ++ +GL ++GV +P  M
Sbjct: 514 DAKRR--VVPFGDEPVDDGHRTRLWLVDATRQVLANGLGLLGVSAPERM 560


>gi|304437110|ref|ZP_07397073.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370061|gb|EFM23723.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 552

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 205/586 (34%), Positives = 300/586 (51%), Gaps = 35/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKK-ILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +       L   ++      ++ +   L  I++E P D A G  +TN AM  +R    
Sbjct: 1   MEIKQQIEQALLRAVEAATAAGELPEGGALPPILLEEPPDKALGDFATNFAMQSARVFRQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE + A +     +D   +AG GF+N YL    +   L  I+ +G  YG      
Sbjct: 61  PPKKIAETLRAHL-TGAWLDHAEMAGPGFLNFYLKKDVMADTLRGILRAGETYGTLAPKD 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + +E+VSANPTGP+HVGH R A VG  L +L+  +GY V  EYY+NDAG Q++ LA+
Sbjct: 120 AAPIQVEYVSANPTGPLHVGHGRGAAVGSALVTLLRTAGYTVESEYYVNDAGNQMHLLAV 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY + L   +   PE  Y G  +    + + D+     L   EE+ L   KD + +
Sbjct: 180 SVNARYLELL-GREVLFPENGYHGADIVETAQRIIDRDGERYLALSEEERLEQFKDIAYR 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  +R+DL    +  D + SE   H   P+ +R ++D L  +G  YE           
Sbjct: 239 EKLAALREDLADFGVTFDAWFSERTLH---PAAVRRVVDVLLERGTAYE----------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    +  RST  GDD DR + + +G  TY AAD+AY   KY RGF  ++ + G+D
Sbjct: 285 -----KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGAD 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV R++A  AA+     Q+ VLL ++V LYRDG  +K+SKR G+ +TLR +++EVG 
Sbjct: 340 HHGYVARVKAAMAALGHDPQQLTVLLLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGV 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+  L R     LDFD    K+++ ENPV+Y+QYA+AR  SIFRQA++        +
Sbjct: 400 DAARYFFLMRSLDSQLDFDLDLAKKRTNENPVYYIQYAHARISSIFRQAEES------KI 453

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P +    E   D +E  LI  LA YP  IE A     P ++A Y ++LA+ FH  ++  
Sbjct: 454 VPLDGAELERLTDETETALIKKLAAYPEEIERAAAEYAPQRIARYSHELAAAFHAFYNKC 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       +      L   RL LV A   +I   L I+GV +P +M
Sbjct: 514 R-------IVGQEPALASARLALVMATGRVIRHSLGILGVSAPEKM 552


>gi|51473278|ref|YP_067035.1| arginyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81390280|sp|Q68XT9|SYR_RICTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51459590|gb|AAU03553.1| Arginine translase [Rickettsia typhi str. Wilmington]
          Length = 576

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 239/585 (40%), Positives = 359/585 (61%), Gaps = 9/585 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F    ++LK  +     ++   ++I +   IE P+D  +G LS+N AMI++    + 
Sbjct: 1   MNIF----NQLKQDIIAASQQLYNNQEIANTATIETPKDSFNGDLSSNIAMIIASKESIA 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A      +   P + S+ IAG GFIN  +     +  +  I+    ++    I K 
Sbjct: 57  PREVALKFKEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKN 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + +NIE+VSANPTGPMH+GH R AV GD LA ++   GY VT+EYY+NDAG+QIN L  +
Sbjct: 117 SNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL      +P G YPG YL  +G+ L+ +Y ++LL   + +   I+K  +V+ 
Sbjct: 177 VLLRYKEAL-GEQITIPIGLYPGEYLIPLGEILSKEYGNKLLTMNDVERFKIIKSLAVEK 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+ + R DL  L I+HDIF SE   +  D   I   +  L   G +YEG LP PK K  +
Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLY--DKGEIEKTVKLLESMGLIYEGTLPAPKGKVHE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                + Q LF+ST  GD  DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH
Sbjct: 294 DWKH-KVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           SGYVKR+EA+  A+ ++K +++V +C+LV    +G+P+KMSKR G F +++ V  +VG D
Sbjct: 353 SGYVKRIEAIVKALGQEKVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNKKVGKD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RFMML R+N + LDFD  KVKEQS+ENP+FYVQYA+ R +SI  +A+++ P+  ++ F
Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTKSILSKARELMPEA-YNSF 471

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         E+++I  LA + + +E +    EP+++AFYL +LAS FH  W+ G+
Sbjct: 472 KEGKYNLSLLSTEEEIEIIKLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGK 531

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           EN   RF+  NN++LT+ RL L   +  +I SGL +IGVE    M
Sbjct: 532 ENSDYRFIIENNQELTLARLALASVIQKVIASGLEVIGVEPMVTM 576


>gi|15926285|ref|NP_373818.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|148267067|ref|YP_001246010.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393115|ref|YP_001315790.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257793189|ref|ZP_05642168.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407674|ref|ZP_05680809.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420362|ref|ZP_05683307.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258436509|ref|ZP_05689167.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258442357|ref|ZP_05691120.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446271|ref|ZP_05694429.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258450070|ref|ZP_05698167.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258455109|ref|ZP_05703071.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269202229|ref|YP_003281498.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282895046|ref|ZP_06303268.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|295406988|ref|ZP_06816791.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276963|ref|ZP_06859470.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246149|ref|ZP_06930004.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|21542256|sp|Q99W05|SYR_STAAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083551|sp|A6TZ85|SYR_STAA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083552|sp|A5IQG1|SYR_STAA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13700499|dbj|BAB41796.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|147740136|gb|ABQ48434.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945567|gb|ABR51503.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257787161|gb|EEV25501.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840754|gb|EEV65212.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843676|gb|EEV68080.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848780|gb|EEV72766.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257852086|gb|EEV76018.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854865|gb|EEV77810.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257856689|gb|EEV79593.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257862749|gb|EEV85515.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262074519|gb|ACY10492.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282762629|gb|EFC02767.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816308|gb|ADC36795.1| Arginyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968219|gb|EFG44245.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176995|gb|EFH36251.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315128881|gb|EFT84879.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329724382|gb|EGG60893.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 553

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|312829102|emb|CBX33944.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
          Length = 553

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGGILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|319935203|ref|ZP_08009642.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809853|gb|EFW06241.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 553

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 207/581 (35%), Positives = 324/581 (55%), Gaps = 35/581 (6%)

Query: 7   FSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
               LK  LK+    +  VE   LD+IVIE P+D  HG  S+N AM L++ L  +P  IA
Sbjct: 6   IELSLKKVLKQAIIDLDFVEDYNLDQIVIEIPKDKTHGDYSSNIAMQLTKILKRNPREIA 65

Query: 66  ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I+  +  D  ++D V IAG GFINL+L    +  I+  ++V    YG++  GKG K N
Sbjct: 66  QGIIETMNKDAGNIDHVEIAGPGFINLFLRKDAMTSIIKEVLVEQDHYGQSDFGKGIKYN 125

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IEFVSANPTG +H+GH + A VGD++  +M  +GY+VT+EYYINDAG QI  LALS++ R
Sbjct: 126 IEFVSANPTGDLHLGHAKGAAVGDSICRIMNAAGYDVTKEYYINDAGNQITNLALSLYAR 185

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y QAL   +  LPE  Y G  +  + + + ++Y  +  +  E++ +   +    +  ++ 
Sbjct: 186 YLQAL-GQERQLPEDGYYGKDIIQIAESIKNEYGDKFAHVDEKEAIAYFRSIGTEHELQK 244

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+D LK   + HD++ SE   +  +   I   I  L  QGY YE                
Sbjct: 245 IKDILKEFRVVHDVWFSETSLYAEN--KIEPTIQRLKDQGYTYEA--------------- 287

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L F+ST   DD DR L+KSDGSYTY   D+AY   K +RG++ ++ ++G+DH GY+
Sbjct: 288 -EGALWFKSTEFDDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A   A+     Q+N+ + ++VR+  +G  +KMSKR G+ +T++ ++D++G D+ R+
Sbjct: 347 NRMKAAIQALGYNADQLNIDIMQMVRMVENGEVVKMSKRTGNAVTIKDLIDDIGVDASRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + +  S   DFD    K +S +NPV+Y QYA+AR  SI RQA+ +  ++         
Sbjct: 407 FFVSKAASSPFDFDLGLAKSKSNDNPVYYAQYAHARMCSIERQAQTVGIEV--------A 458

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              E      E++L+ H+ E+   I  +   + P+K+A Y+  LA +FH  ++       
Sbjct: 459 DHYELLTHPKEIELVKHINEFRNEIVESAKQRAPHKIANYIQRLAQLFHSFYNDCY---- 514

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   NR+L+  RL LV A    + + LN+IGV +P +M
Sbjct: 515 --VIDEANRELSSQRLSLVRATQITLKNALNLIGVSAPEKM 553


>gi|325982011|ref|YP_004294413.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531530|gb|ADZ26251.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 586

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 195/614 (31%), Positives = 321/614 (52%), Gaps = 65/614 (10%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F +F +     +K+    I   +     + + R +  +HG  S N AM L++PL  +P  
Sbjct: 6   FPNFKTHFIKLIKKASSAITSLETAAISVELTRTKQASHGDYSCNLAMQLAKPLHKNPRE 65

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+L++  +   P ++ V +AG GFINLYL  S  ++ L  I+ S   +G +  G+G K+
Sbjct: 66  IAQLLINALPPSPYLEKVEVAGAGFINLYLKNSAKQQFLHLILRSKNTFGNSTFGQGRKI 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +G +L++++A +G++V+RE+Y+NDAG Q++ L LS + 
Sbjct: 126 QVEFVSANPTGPLHVGHGRGAAIGASLSNILAAAGFDVSREFYVNDAGRQMDILTLSTWL 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSVQ- 239
           RY + L +     P   Y G Y++ + + +   ++   ++ PE   +     V+  +V  
Sbjct: 186 RYLE-LNHIHVPFPHNAYQGEYVRTMAQLIFQAHAQRYVHQPELLLDSLPEAVRATAVNT 244

Query: 240 ----------------------------AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                                         +   R+DL    ++ D + SE   +  D  
Sbjct: 245 DEQLDKLIANTKKILGEDYTYIHNLVLTEQLGDCRNDLMEFGVEFDTWFSEQSLY--DNG 302

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   ID LA++ ++Y+                    + FRST  GD+ DR + + +G +
Sbjct: 303 LVAHTIDLLAKKHHLYQ----------------QDGAIWFRSTDFGDEKDRVVQRENGQF 346

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA+D+AY   K+ERGFD +I + G+DH GY+ R++    A+     ++ + L +   L
Sbjct: 347 TYFASDIAYHLNKFERGFDQVINIWGADHHGYIPRVKGALQALELDAERLQIALVQFAVL 406

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           YRDG    MS R+G+F+TLR +  EVG D+ RF  + RK+ + LDFD    K QS ENPV
Sbjct: 407 YRDGKKAPMSTRSGEFVTLRELRQEVGKDAARFFYVMRKSDQHLDFDMDLAKSQSNENPV 466

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQYA+AR  S+  Q +    DL         +  ++    +EL L+  L ++P  IE 
Sbjct: 467 YYVQYAHARVCSVLTQWEGNIDDLQE-------VNVDALSSPAELALLQKLIDFPDTIEI 519

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P+ +AFYL +LAS FH +++  R              L   RL L+ ++  +++
Sbjct: 520 AAKESSPHLIAFYLRELASEFHSYYNSTRF-------LVPEIPLQHARLALIASIRQVLH 572

Query: 572 SGLNIIGVESPNEM 585
           +GL ++GV +P++M
Sbjct: 573 NGLTLLGVSAPDKM 586


>gi|256827094|ref|YP_003151053.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583237|gb|ACU94371.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 575

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 191/600 (31%), Positives = 307/600 (51%), Gaps = 40/600 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +   ++       +         +ERPRD A+G  ++  A+  ++    +
Sbjct: 1   MQIREQLEQLVNGAIRSAIEDESLALTEAPEAALERPRDLANGDWASTVALRSAKLAHTN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ IV  I  +  +DSV IAG GFIN+ L+P+  + +++ +   G+++G++ I +G
Sbjct: 61  PRQIAQAIVDHIPANNLIDSVDIAGAGFINIKLAPTAFQSVVAQVRQDGVDFGKSTIEEG 120

Query: 121 TKVN-IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                IE+VSANPTGP HVGH R A +GD  A +M  +GY V  E YIND G+Q++    
Sbjct: 121 YTNVNIEYVSANPTGPFHVGHGRWAALGDATARVMRHAGYTVYEENYINDHGSQMDNFGE 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RYQQ L   D ++PE  Y G Y+K + + + D    + L+   ++     ++ + Q
Sbjct: 181 SVAVRYQQLL-GRDVEMPESCYAGGYVKDIAQSIIDTDGDKWLDADPDERRVNFRERAYQ 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296
             +        A     D + SE   +  D      +   ID +  +GY+YE        
Sbjct: 240 FELAEQHRICDAFGTTFDKWFSERSLYVKDADGKSQVDRAIDAMREKGYIYES------- 292

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       + F+ST  GDD DR ++KS+G  TYF +D+AY   K +RGF+++I + 
Sbjct: 293 ---------DGAVWFKSTEFGDDKDRVVMKSNGETTYFTSDVAYHYDKMQRGFEHLIDLW 343

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYV R EA+ AA       + V+L +LV L+RDG P++MSKR G+ +T   V+DE
Sbjct: 344 GADHHGYVARCEAMLAAWGY-PGALEVMLGQLVNLFRDGKPVRMSKRTGEMVTFEEVIDE 402

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469
           VG DS R+MML R + + +DFD    K++   NPV+YVQYA+AR  SI R+       AK
Sbjct: 403 VGVDSTRWMMLSRSSDQTIDFDIEVAKKRDASNPVYYVQYAHARICSILRKAAPADLAAK 462

Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
               ++  +     +IP  ++       SE+ L+  +     ++ +A   +  ++L  Y 
Sbjct: 463 AESGEISMNELAHAIIPAHADLTGLTHPSEIDLMRKMDGLQDLVASAARDRAAFRLTHYS 522

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLA +FH  + +         V   +  L   RL L+ A   ++   L ++G+ +P +M
Sbjct: 523 QDLAGLFHAFYGNCH-------VITEDESLQNARLALIDATRIVLEISLGLLGISAPTKM 575


>gi|323342451|ref|ZP_08082683.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463563|gb|EFY08757.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 546

 Score =  558 bits (1438), Expect = e-156,   Method: Composition-based stats.
 Identities = 196/585 (33%), Positives = 336/585 (57%), Gaps = 39/585 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       ++L  ++++I       +K    +++E P +   G  STN AM L++ +G +
Sbjct: 1   MN---KIETKLVGHIEDIILDAFGIEKEDGLVMLEIPNNPEMGDYSTNIAMRLTKRVGKN 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA +IV +++ +  V+S+ +AG GFIN  + P+ L  +++ ++ +G +YGR+  G+G
Sbjct: 58  PREIAGVIVEKLEDNEMVESISVAGPGFINFVMKPAVLGSVVNDVIEAGKDYGRSNAGEG 117

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++  E+VSANPTG +HVGH R A  GD+L+ +M+F+GY+V REYYIND G QI  L+ S
Sbjct: 118 IRLLNEYVSANPTGQLHVGHARGAAWGDSLSRIMSFAGYDVLREYYINDLGNQILMLSHS 177

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           ++ RY+QA +  ++ LPE  Y G  +  +  ++ +    + L+ PEE+W+P  K+  ++ 
Sbjct: 178 LYARYKQA-FGMEAPLPEDGYHGPDIIEIANDVKETEGDKWLSAPEEEWVPYFKELGIKL 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ I++DL    ++ D ++SE   +  D   + + ++ L  +G  +E            
Sbjct: 237 ELERIKEDLNTFGVEMDSWVSEKWLY--DDGRVEESLEALKAKGVTFE------------ 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               +   L  RST  GDD DR L+KSDGSYTY   D+A    K ERG+ +++ + G DH
Sbjct: 283 ----EDGALWLRSTDFGDDKDRVLIKSDGSYTYLVPDIANHIYKLERGYTHLLNLWGGDH 338

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ R++A   A+      ++V + ++VRL  +G+ +KMSKR G+ + L  +VD++G D
Sbjct: 339 HGYIVRMQAALEALGHPNV-LDVDIIQMVRLVDEGVEVKMSKRTGNALGLVELVDDIGVD 397

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  + R  +  LDFD    +++S +NPVFYVQYA+AR  SI RQA ++         
Sbjct: 398 ATRYFFVSRALATPLDFDLGLARKKSNDNPVFYVQYAHARICSILRQAGEV--------- 448

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +V   +   +  E+ L+  + E+  V+ +A   +E +K+A Y+ DLAS FH  +    
Sbjct: 449 -PHVDVIDQLTNPKEIALLKEINEFSSVVADAAKKREVHKIANYVQDLASSFHSFY---- 503

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++ +  +N +L   RL L+ AV   +++ LN+IGV +P +M
Sbjct: 504 --GEVKVMDPSNPELQAQRLNLLVAVKITLSNALNLIGVNAPEQM 546


>gi|49485481|ref|YP_042702.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|56749393|sp|Q6GBM1|SYR_STAAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49243924|emb|CAG42350.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
          Length = 553

 Score =  558 bits (1438), Expect = e-156,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKCEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|91777021|ref|YP_546777.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91711008|gb|ABE50936.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 556

 Score =  558 bits (1438), Expect = e-156,   Method: Composition-based stats.
 Identities = 192/586 (32%), Positives = 296/586 (50%), Gaps = 41/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L+     +     I   I +ERP++  HG  STN AM L++PL  +P  IAE
Sbjct: 5   LKAHLTELLQVAANSLDAGAAI-SAIQLERPKNTQHGDFSTNLAMTLAKPLRQNPRAIAE 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V+ V IAG GFIN YLSPS  + ++  I   G +YG N  G+  KV +E
Sbjct: 64  SLIKALPASEYVEKVEIAGAGFINFYLSPSAKQAVVREIQRQGEKYGTNDSGQSRKVQVE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD LA L+A +G+ VTRE+Y NDAGAQI+ L +SV  R  
Sbjct: 124 FVSANPTGPLHVGHGRGAAVGDCLARLLAANGWAVTREFYYNDAGAQIDNLTVSVQARC- 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAM 241
           + +   D+  PE  Y G Y+  V      +         +    + +    ++ ++V  +
Sbjct: 183 KGITPGDAAWPENGYRGDYIADVAAAYMARETVIADDQAVTGKGDAEDAEAIRQFAVAYL 242

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DLKA  I  D+F  E   +R     +   +++L R G+ YE             
Sbjct: 243 RHEQDLDLKAFKINFDVFSLESALYR--EGKVESTVESLIRSGHTYE------------- 287

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                + L  R+T  GDD DR + K +G YTYF  D+AY   K++RGF+ +I   G+DH 
Sbjct: 288 ---QDEALWLRTTDFGDDKDRVMRKREGGYTYFVPDVAYHLDKWQRGFERVINEQGADHH 344

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR +++EVG 
Sbjct: 345 STITRVRAGLQALNVGIPQGWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDLIEEVGC 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R+    L FD    + QS +NPV+Y+QYA+AR  S+  +          D+
Sbjct: 405 DATRYFLAARRADSQLVFDIDLARAQSNDNPVYYIQYAHARICSVLSEWG-------GDV 457

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E  L+  L E+P ++ NA     P+ +A YL DLA   H +++  
Sbjct: 458 ASLAQADLSLLETEHEAILMQRLGEFPELVANAAQELAPHMVATYLKDLAGDLHSYYNAH 517

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           +  +T  R+ L+     ++ +GL ++GV +P +M
Sbjct: 518 KF-------LVEDADVTTARMALISVTRQVLRNGLELLGVSAPEKM 556


>gi|300858249|ref|YP_003783232.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685703|gb|ADK28625.1| Arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302205970|gb|ADL10312.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302330523|gb|ADL20717.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276205|gb|ADO26104.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 550

 Score =  558 bits (1438), Expect = e-156,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  +K     I     ++  +L   +V+ERPR+  HG  +TN A+ +++ +G++P  
Sbjct: 4   ADLSHLIKRTATTILESRGLDASVLPETVVVERPRNPEHGDYATNVALQVAKKVGMNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + +L+V  + +D  V    IAG GFIN+ L+ +   +I++ I+ +G  +G + +  G++V
Sbjct: 64  LGQLLVDALALDEAVAEAGIAGPGFINIRLAAAAQGEIVAKILAAGEAFGHSDLYAGSRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFTNSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  + + +   +   L   P E  L   +   V+ M  
Sbjct: 184 AAK------GDPTPEDGYGGDYINDIAEAVVASHPDVLTQEPTEM-LETFRSVGVEMMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D+F  E+     +   +   I+ L   G +Y                
Sbjct: 237 HIKESLHEFGTDFDVFFHENSLF--ESGAVDKAIERLKENGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +S+  GDD DR ++KSDG   Y A D+AY   K+ERG +  IY++G+DH GY
Sbjct: 279 FQDGAWWLKSSDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFERGHNLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+  +   + VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D  R
Sbjct: 339 ISRLRAAAAALGYEPNSVEVLIGQMVNLVRDGQAVRMSKRAGTVITLDDLVEAIGIDGAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + M+       LD D    + QS +NPV+YVQY +AR  SI R+A D+        F   
Sbjct: 399 YSMIRSSVDSSLDIDLALWQSQSSDNPVYYVQYGHARLCSIARKAGDLGITAIDPNFAL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E  LI  L E+P V++ A   +EP+++A Y  +LA  FH  +   +  P
Sbjct: 458 ------LTHDREGDLIRTLGEFPAVVKAAAELREPHRVARYAEELAGTFHRFYDSCQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      + + +   RL L +A   ++ + L ++GV +P  M
Sbjct: 512 K---AGESPQSVHTARLALANATRQVLANALGLVGVTAPERM 550


>gi|302332319|gb|ADL22512.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 553

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGYVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|326403086|ref|YP_004283167.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325049947|dbj|BAJ80285.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 596

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 255/597 (42%), Positives = 364/597 (60%), Gaps = 18/597 (3%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +F      +   +  +     ++ ++  RI +   R+ AHG ++TNAA+I ++PLG  P
Sbjct: 4   NIFNALRRLILAEMARLFPA--LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPP 61

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA  + A +   PD+     AG GF+NL L+       +++I+ +G  +G + +G+G 
Sbjct: 62  REIATALAAALSALPDIAKAEPAGPGFVNLTLTDPVWHAEIAAILRAGEAFGASAMGQGR 121

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +VN+E+VSANPTGP+ VGHCR AVVGD LASL+A +GY+VTREYYINDAGAQ+  LA SV
Sbjct: 122 RVNVEYVSANPTGPLTVGHCRGAVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSV 181

Query: 182 FWRYQQALYNN--DSDLPEG-----YYPGVYLKHVGKELADKYSSELLN-----FPEEKW 229
           +WRY QAL     + D          YPG YL  V + L   +   L        P E W
Sbjct: 182 YWRYLQALGTQLTEHDFAAATPTGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAW 241

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  V+ +++++MM +IR+DL ALN++ D+F SE          +      L  Q  +YEG
Sbjct: 242 LDTVRRHAIESMMALIREDLAALNVRQDVFTSEAALIA--AGGVERAEAILRGQDLLYEG 299

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +L PPK KT +  +  R+Q LFR+T  GDDVDRP+ KSDGS TYF  D+A    K  RGF
Sbjct: 300 VLEPPKGKTPEDWE-PREQTLFRATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGF 358

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D MI V G+DH GYVKR++A   A++  + A ++++LC++VR+ +DG P++MSKRAG +I
Sbjct: 359 DTMIDVWGADHGGYVKRMQAAVKALAAGRDATLDIVLCQIVRVMKDGTPMRMSKRAGTYI 418

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            LR ++D VG D VRF+ML RK+   ++FD      Q++ENPVFYVQYA+ARCRS+ R A
Sbjct: 419 ELRDLIDAVGPDVVRFIMLMRKSDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAA 478

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            ++    D            S     EL L+  LA +PR++E+A  A+EP+++ F+LYDL
Sbjct: 479 AEMPELGDTVDAALAEAALASLTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDL 538

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  FH  W+ GR +  LRF+QA+  + +  RL LV A A +I SGL ++GV    EM
Sbjct: 539 AGDFHALWNAGRADATLRFIQADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595


>gi|253731229|ref|ZP_04865394.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724970|gb|EES93699.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|329729647|gb|EGG66048.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 553

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|167465619|ref|ZP_02330708.1| arginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 557

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 207/587 (35%), Positives = 320/587 (54%), Gaps = 32/587 (5%)

Query: 1   MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +  + +K  +   +     V+ + L  + +E P+D AHG  +TN AM L+R    
Sbjct: 1   MNVLNEVKTSVKKAIADAVVSAGIVDIEQLPAVTLEVPKDKAHGDFATNIAMQLTRIAKQ 60

Query: 60  DPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IAE ++A +  +    D V IAG GFIN  ++ SYL +++  ++  G  YG+  +G
Sbjct: 61  NPRQIAEKLIAHLDKEAAYIDEVEIAGPGFINFRMNKSYLYQVIGQVLEQGNSYGKINMG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTG +H+GH R A VGD L +++  +G EVTREYYINDAG Q+  LA
Sbjct: 121 KGKRVQVEFVSANPTGSLHLGHARGAAVGDALCNVLEMAGCEVTREYYINDAGNQVLNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+  RY+QAL   ++++PE  Y G  +K   +ELA      LL   +E+ L   + Y +
Sbjct: 181 KSIEARYRQAL-GQEAEMPEDGYYGEDIKGFAEELAKAEGDRLLALNDEERLVFFRKYGL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  I+ DL    ++ D + SE   +  +   I D++  L   G+V+E          
Sbjct: 240 EKELDKIKRDLGRFGVKFDEWFSETSIYENNM--IDDVLKQLKDNGHVFE---------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T  GDD DR L+K+DG+YTY   D+AY + KYERG+D +I + G+
Sbjct: 288 ------QDGATWLRTTDYGDDKDRVLIKNDGTYTYLTPDVAYHRNKYERGYDEIINIWGA 341

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T+  ++DEVG
Sbjct: 342 DHHGYIPRMKAAVTALGYDANKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVG 401

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D++R+    R     LDFD      +S ENPVFYVQYA+AR  SIFRQA++        
Sbjct: 402 VDAIRYFFTMRSMDSHLDFDMDLAISKSNENPVFYVQYAHARICSIFRQAEEQG----IS 457

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           + P            +E  L+  +AE P  +  A     P++L  Y+Y+LAS FH ++  
Sbjct: 458 MLPAGQADLSRLTAEAEFDLLRKMAELPEEVAIAAEQYAPHRLIRYVYELASQFHSYYKA 517

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       V  ++   T  RL L+ A+  ++ + L  +GV  P  M
Sbjct: 518 ER-------VITDDAAQTQARLALLAALRVVLRNVLAAVGVSVPERM 557


>gi|189424202|ref|YP_001951379.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420461|gb|ACD94859.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 564

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 190/591 (32%), Positives = 296/591 (50%), Gaps = 36/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    +  +   L        +  ++   +VI  P   AHG  + N A+ L++P    P 
Sbjct: 2   IRQKLAVLVTQALASARNAGVLCSELFPDVVIGTPAQEAHGDFACNIALQLAKPERKSPR 61

Query: 63  TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +AE ++  +   D  +    IAG GFIN +++PS  ++ L  I  +G  YG    G G 
Sbjct: 62  QVAESVLLHLQDTDGLIRRAEIAGPGFINFFIAPSAWQQCLPLIEQAGPAYGTTDSGAGR 121

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +EFVSANPTGP+H+GH R A +GD L  L+A +G++VTRE+Y NDAGAQI+ LALSV
Sbjct: 122 KAQVEFVSANPTGPLHIGHGRGAAIGDVLCRLLAATGWQVTREFYYNDAGAQISNLALSV 181

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDY 236
             R    +  +D   P   Y G Y+K V               ++    +   L  ++ +
Sbjct: 182 QARCL-GIETDDPRWPADGYQGEYIKEVATAYLAGETVVAGDQQVTASGDPDDLDAIRRF 240

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V A+ +    DL+A +++ D +  E   +      +   +  +   G+ YE        
Sbjct: 241 AVAALRREQDQDLQAFDVRFDHYFLESSLY--SDGKVEAAVQQMIANGHTYE-------- 290

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L  R+T  GDD DR + K+DG YTYF  D+AY   K++RGF  ++   
Sbjct: 291 --------QEGALWLRTTDFGDDKDRVMRKTDGGYTYFVPDVAYHLDKWQRGFLRVVNEQ 342

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH   + R+ A   A+     K     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 343 GADHHSTITRVRAGLQALNAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLI 402

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DEVG D+ RF  + RK    L FD    K+QS +NPV+Y+QYA+AR  SIF  A D    
Sbjct: 403 DEVGRDATRFFFVMRKPDSQLVFDIDLAKQQSLDNPVYYIQYAHARICSIFENAADKGIH 462

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L        V+ Q       EL+LI  L   P  +++A    EP+K+ +YL +LA  FH 
Sbjct: 463 LPDQTPDAAVLAQ--LETPEELRLIKWLESLPETVDDAAQEFEPHKIVYYLTELAGQFHS 520

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++  +       V   +  L++ RL L+     +I + L ++GV +P +M
Sbjct: 521 YYNKSK-------VVTEDTSLSIARLYLLARTRQVIQNALTLLGVSAPEKM 564


>gi|82750314|ref|YP_416055.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|109895039|sp|Q2YSW8|SYR_STAAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|82655845|emb|CAI80247.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 553

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 197/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGYVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K   E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEK-RPEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|7476032|pir||T09994 arginine-tRNA ligase (EC 6.1.1.19) - Mycobacterium leprae
 gi|699338|gb|AAA63099.1| argS [Mycobacterium leprae]
          Length = 687

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 187/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR+  HG  S+N AM L + +G +PL 
Sbjct: 141 ADLAELLKTTAIVVLAERGLDAAALPQTVTVERPRNPEHGDYSSNLAMQLGKKVGANPLE 200

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +  V +AG GFIN+ L  S    I+++++ +   +G +    G ++
Sbjct: 201 LAGWLAEVLAQAGGIADVEVAGPGFINMRLDASAQAMIVNTVINADKNFGHSDDLAGYQI 260

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQ++    S+  
Sbjct: 261 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQVDRFTNSLIA 320

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +  L       P   Y G Y+  +  ++  + +   L+ PE +    V++  V  M  
Sbjct: 321 AAKGELT------PADGYAGTYVTDIAAQVMQQ-APYALSLPESEMHETVREIGVDLMFT 373

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H      + + I  L   G VYE               
Sbjct: 374 HIKKSLHEFGTDFDVYTHEDSMHA--SGRVDEAIARLRDTGNVYE--------------- 416

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                L  R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 417 -KDGALWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 475

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L  DG  ++MSKR+G+ ITL  +V+ +G D+ R
Sbjct: 476 IARLKAAAAAFGDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGVDAAR 535

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A +            +
Sbjct: 536 YSLIRSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAAEFG-------LIPD 588

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  + E+P+V++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 589 TGHLELLSHDKEGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 648

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 649 QG---DEKPTDLHTARLALCQANRQVIANGLAILGVSAPERM 687


>gi|83591226|ref|YP_431235.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|109895003|sp|Q2RFU7|SYR_MOOTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83574140|gb|ABC20692.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 560

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 200/565 (35%), Positives = 311/565 (55%), Gaps = 31/565 (5%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDS 80
            ++    L   VIE PRD  HG  + N A++L+R     P  +A  IV  ++   P V  
Sbjct: 26  GEISYDELPDFVIETPRDKTHGDFAANLALLLARQARQSPRNVAAAIVRHLERPQPGVAR 85

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V +AG GFIN  L   +L  +L +++     YG + IG+G KV +EFVSANPTG +H+G+
Sbjct: 86  VEVAGPGFINFTLDNQWLLPVLPAVLAEDDHYGWSNIGQGAKVQVEFVSANPTGLLHMGN 145

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R A +GD++A+L+   GY+VTRE+YINDAG QI    LS+  RY QAL   ++ +PE  
Sbjct: 146 ARGAALGDSIANLLTAVGYDVTREFYINDAGNQIENFGLSLEARYLQAL-GQEASIPEDG 204

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G  L         KY  + L+        ++  ++++  +  IR  L+   + +D++ 
Sbjct: 205 YHGEDLVATVGRFIAKYGDKYLDTDPALRREMLVRFALEEKLDAIRRALEDFGVTYDVWF 264

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   H  D   +   I +L + GY+YE                    L F++T  GD  
Sbjct: 265 SEQSLH--DSGAVARAIADLEKAGYIYE----------------KDGALWFKATSFGDVK 306

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D  +++ +G  TYFAAD+AY + K+ERGF+ +I + G+DH G+V RL+    A+     +
Sbjct: 307 DEVVVRKNGIPTYFAADIAYHRNKFERGFERVINIWGADHHGHVARLKGALQALGYDPRR 366

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V+L +LVRLY+ G  ++MSKR G ++TL  +++EVG D+ R+  +  K+   L+FD  
Sbjct: 367 LEVVLMQLVRLYQGGEILRMSKRTGQYVTLEELIEEVGRDAARYFFVMLKSDSHLEFDLD 426

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
             + QS +NPV+YVQYA+AR  SI R AKD       ++ P      E   D +EL+LI 
Sbjct: 427 LARSQSADNPVYYVQYAHARICSILRLAKDRG----LEVPPAREARLELLQDPAELELIK 482

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +A +P  +  A  A EP++L  + +DLAS+FH  ++  R       V A++ ++   RL
Sbjct: 483 QIAAWPDTVAGAAQALEPHRLTRFAHDLASLFHSFYTSCR-------VLADDPEVRKARL 535

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            LV A    + + L+++GV +P  M
Sbjct: 536 VLVEATRITLRNVLHLLGVTAPERM 560


>gi|114778709|ref|ZP_01453521.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551071|gb|EAU53633.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 576

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 248/588 (42%), Positives = 340/588 (57%), Gaps = 25/588 (4%)

Query: 7   FSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
               L+  L++   K+        +  +V+ RP++  HG  + N AM L+R L   P  I
Sbjct: 5   VKQALEQALEQALIKLLQDHPDAAVPPVVLTRPKEKEHGDYAANVAMPLARVLKQSPQQI 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKV 123
           A  I+A +     V++  +AG GFIN+ L  +    +L +I+    EYGR       TKV
Sbjct: 65  AANILAAVVWPDAVEAADVAGPGFINIRLKKASEANVLKTIIQQAEEYGRVAAAADATKV 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGPMHVGH R AVVGD LA+L+A +G  V REYYINDAGAQI  LA SV+ 
Sbjct: 125 NLEFVSANPTGPMHVGHGRGAVVGDALANLLAATGNHVQREYYINDAGAQIGVLAGSVWL 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           R ++ L     + PE  YPG Y+  +  E LA      LL   E+  L ++   ++ A M
Sbjct: 185 RMRE-LNGEQIEFPESAYPGEYIVQIATEVLAAHDYKTLLAMDEDARLALIGQLAIDANM 243

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +IRDDL A+ I  D++ SE   H  +   + ++I+ L   G VY G LPPPK K     
Sbjct: 244 AMIRDDLNAIGIHFDLYFSEQSLH--NSGRVNELIERLQADGVVYRGTLPPPKGKEVSDY 301

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
               + LLFR+T  GDDVDRPL K DG+ TYFAAD+AY   K+ RGFD MI V G+DH G
Sbjct: 302 -QPVEHLLFRTTDFGDDVDRPLAKQDGTATYFAADIAYHYDKHLRGFDRMIDVWGADHGG 360

Query: 363 YVKRLEAVAAAVSEKKA----QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           YV R++A   A+ E +A    Q +V+L ++V L RDG+P+KMSKRAG F+TLR VVDEVG
Sbjct: 361 YVTRVQAAMKALIEPEAASAAQPDVILVQMVNLTRDGVPVKMSKRAGTFVTLREVVDEVG 420

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DF 477
            D+VRF  + R+    LDFD    K+Q+ ENPV+YVQYA+AR  +I R+A D    + + 
Sbjct: 421 RDAVRFNFMTRRVESQLDFDLEAAKKQNDENPVYYVQYAHARIAAILRKASDEGVVVGEI 480

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D    +V+         E +L+ HL  YP  +  A    E Y++A Y   LA+ FH  + 
Sbjct: 481 DDVDLSVLTSH-----EEQRLVAHLLAYPEALLRAADRLEAYRVATYAMRLAADFHSFYH 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R       V  ++  LT+ R+ L+ AVA +I + L I+GV +P+ M
Sbjct: 536 KHR-------VVTDDNNLTVARMLLIRAVAQVITNALGILGVSAPDRM 576


>gi|300933603|ref|ZP_07148859.1| arginyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 554

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 183/582 (31%), Positives = 289/582 (49%), Gaps = 34/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           + SS +  + + +     ++  ++     +ERPR+  HG  +TN AM +++  G +P   
Sbjct: 5   ELSSLITEHARTVLDAHDLDSSVVPETATVERPRNPEHGDYATNIAMQVAKKAGTNPREF 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
              +   +     +D   +AG GFIN+ L+     KI++ I+ +G  YG+     G K+N
Sbjct: 65  GTWLAESLGAAEGIDEATVAGPGFINIRLAADAQGKIVTDILNAGENYGQGDEFAGKKIN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G  R A VGD+L  ++   G EVTREYY ND G QI+  A S+   
Sbjct: 125 LEFVSANPTGPVHLGGTRWAAVGDSLGRILTKRGAEVTREYYFNDHGTQIDRFARSLVAA 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y++ +  ++   +     N  EE      +   V+ M   
Sbjct: 185 AK------GQPTPEDGYGGDYIQDIANQITSAH-EGWENKSEEDLHEFFRAEGVELMFAH 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+  L     + D++  E+     +   +   I  L   G +YE                
Sbjct: 238 IKRTLAEFGTEFDVYFHENSLF--ESGAVDKAIQTLKSNGNLYES--------------- 280

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                  R++  GDD DR ++KSDG   Y A D+AY   K +RG D  IY++G+DH GY+
Sbjct: 281 -EGAWWLRASNFGDDKDRVVIKSDGDAAYIAGDIAYIADKIDRGHDLCIYMLGADHHGYI 339

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A AAA+     Q+ V++ ++V L +DG  ++MSKRAG  ITL  +V+ +G D+ R+
Sbjct: 340 ARLKAAAAALGYDPDQVEVMIGQMVNLVKDGKAVRMSKRAGTVITLDDLVELIGVDAARY 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ++       LD D      QS +NPVFYVQY +AR  SI R+A +    + +D    ++
Sbjct: 400 ALIRSSVDSSLDIDMNLWASQSNDNPVFYVQYGHARLSSIARKADEAG--VTYDGADMSL 457

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +  E E D     LI  L E+P VI  A   +EP+++A Y   LA  FH  +   +  P+
Sbjct: 458 LTHEREGD-----LIRTLGEFPEVIATAAELREPHRIARYAEHLAGTFHRFYDACQILPK 512

Query: 545 LRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 ++  ++   RL L  A    + + L ++GV +P  M
Sbjct: 513 ADQPTGSDADEVFRSRLALAAATRQTLANALALVGVSAPERM 554


>gi|295105829|emb|CBL03372.1| arginyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 578

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 189/600 (31%), Positives = 313/600 (52%), Gaps = 40/600 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +   +        +E +      +ERPRD A+G  ++  AM  ++    +
Sbjct: 4   MQIREQLEQLIDAAVAAACKDGSLELEQAPEAALERPRDEANGDWASTVAMRSAKLAKKN 63

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA++IV  +  +  V SV IAG GFIN+ L+PS L+ + +       ++GR  I +G
Sbjct: 64  PREIAQIIVDHLPENDLVQSVDIAGPGFINIRLAPSALQGVAAQARAEKGDFGRGTIPEG 123

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+N+E++SANPTGP+HVGH R A +GD  A +M  +GY+V  E+YINDAG Q++    
Sbjct: 124 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RYQQ L   D ++PE  Y G Y+K + + + D+   + L+   ++ +   ++ +  
Sbjct: 184 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQAIIDEDGDKWLDADPKERMENFRERAYA 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKS 296
             +       +      + + SE   +  D    S +   ++ +  +GY+Y         
Sbjct: 243 YELAEQHRVTERFGTTFECWFSERSLYVPDETGKSAVDRSLEAMDAKGYIY--------- 293

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                  +      F+S+   D+ DR L+K++G  TYF +D+AY   K ERGFD++I + 
Sbjct: 294 -------VKDGATWFKSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 346

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R EA+ AA       + ++L +LV L+RDG  ++MSKR G+ IT   ++DE
Sbjct: 347 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 405

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--- 473
           VG D+ R++ML + + + +DFD    K++   NPV+YVQYA+AR  SI R+A D      
Sbjct: 406 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAAA 465

Query: 474 ----DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
               ++  D     VIP + +       SEL L+  + ++  ++  A   +  ++L  Y 
Sbjct: 466 AEAGEMSMDELAAKVIPADVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 525

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLAS+FH  +++         V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 526 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVTAPAKM 578


>gi|283469905|emb|CAQ49116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 553

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNILLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    +  +   ++L+  +A++   IE+A   +  +++  Y+ DLAS FH  ++  
Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++   T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIVKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|212703468|ref|ZP_03311596.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098]
 gi|212673082|gb|EEB33565.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098]
          Length = 551

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 193/576 (33%), Positives = 319/576 (55%), Gaps = 32/576 (5%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L++ L  I  ++ +      + VIE PRD  HG L+ N AM+L+R    +P  +A++ V 
Sbjct: 7   LRSALMGIVEEMGLN--WPAKAVIEPPRDPKHGDLAANIAMLLAREAHKNPRELAQVFVE 64

Query: 71  RIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           ++     D++ V +AG GF N+  S  + RK +  +  +G  YG++ +G+G K  +E+VS
Sbjct: 65  KLPQRCADIEKVEVAGPGFCNVTFSQHFWRKTVCEVEAAGAAYGQSSVGQGRKTLVEYVS 124

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+HVGH R A VGD+LA L+  +G++V  EYYINDAG Q+  L LSV+ R ++ L
Sbjct: 125 ANPTGPLHVGHGRGAAVGDSLARLLRKAGFDVETEYYINDAGRQMRILGLSVWLRVKE-L 183

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                + PE YY G Y+  + +E+  +    L +  ++       + ++  ++  I+ DL
Sbjct: 184 AGRPVEWPEDYYRGSYIIDIAREMLAE-DPSLPDMEDQAGQDRCYERAMNEILDGIKADL 242

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               ++H  + SE      +   ++   D L   G+ ++                     
Sbjct: 243 ADFRVEHQHWFSEKTLV--ESGAVKAAFDALTEAGHTFD----------------KDGAF 284

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
            F +  +GDD DR L KSDGS TYFA+D+AY   K++RG+D +I + G+DH GYV R+ A
Sbjct: 285 WFATQALGDDKDRVLRKSDGSLTYFASDIAYHHNKFQRGYDWLIDIWGADHHGYVPRMRA 344

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              A+ + +   +V+L +LV L + G P+ MS RAG F TL  VV EVG+D+ RFM L R
Sbjct: 345 AITAMGKPRESFDVVLIQLVNLLQGGKPVSMSTRAGTFETLADVVKEVGADAARFMFLSR 404

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           K+   LDFD    K++S +NPV+YVQYA+AR  ++ R+A++    L        +   ++
Sbjct: 405 KSDTSLDFDLELAKQRSLDNPVYYVQYAHARICAVLRRAEERGITLPAAATDELLAALDT 464

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                ++ L+  +A +  ++  A  A   + ++ YL DLA + H +++  +       + 
Sbjct: 465 ---PEDMALLRKMAGFEDMVATAAQALAVHHVSHYLMDLAGMLHSYYAKHQ------VLL 515

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A++   T+ RL L+ AV+ ++ +GL+++GV +P  M
Sbjct: 516 ADDTARTLSRLALLRAVSQVLRNGLDLLGVSAPEVM 551


>gi|15923597|ref|NP_371131.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156978936|ref|YP_001441195.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255005401|ref|ZP_05144002.2| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|21542255|sp|Q932F6|SYR_STAAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232846|sp|A7WZ56|SYR_STAA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14246375|dbj|BAB56769.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156721071|dbj|BAF77488.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 553

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 195/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+   + +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETHFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|120405304|ref|YP_955133.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|166232813|sp|A1TD77|SYR_MYCVP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119958122|gb|ABM15127.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 550

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 291/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L  IV +ERPR+  HG  +TN A+ L + +G +P  
Sbjct: 4   ADLAELLKATAAAVLAEHGLDSAALPAIVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + +  +AG GF+NL +  S    I+  ++ +G  YG +    G +V
Sbjct: 64  LAGWLAAALVAKDGIAAADVAGPGFVNLRIEASAQNVIVGDVIAAGATYGASGELDGRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G EV REYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAEVVREYYFNDHGAQIDRFTNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K     L  P+ +     +   V  M  
Sbjct: 184 AAK------GEPAPEDGYAGTYIADIAAQVLAKE-PGALELPDAEMRETFRAVGVNLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIAKLRETGSIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +  R+T  GDD DR ++KSDG   Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGQPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + VL+ ++V L RDG P++MSKRAG  ITL  +VD +G D+ R
Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVDAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++    D       
Sbjct: 399 YALIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGVAAD------- 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +      E  LI ++ E+PRV++ A   +EP++++ YL DLA  +H  +   R  P
Sbjct: 452 TAHLDLLTHDKEGTLIRNIGEFPRVLKTAASLREPHRVSRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DETPGDLHAARLALCAATRQVIANGLGILGVSAPERM 550


>gi|325844324|ref|ZP_08168100.1| arginine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489191|gb|EGC91573.1| arginine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 553

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 193/585 (32%), Positives = 325/585 (55%), Gaps = 34/585 (5%)

Query: 3   LFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +       LK  +K+       + +     +++E  +D +HG  STN AM L++    +P
Sbjct: 1   MIQTLKENLKAEIKQAVLTCGYITESDDLNVILENSKDVSHGDYSTNIAMQLTKIAKKNP 60

Query: 62  LTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IAE I+        +V+ + IAG GFIN ++  S   + + +I+  G E+G +  G G
Sbjct: 61  RMIAEEILNNFNAESANVEKIEIAGPGFINFFMKKSAFTQSIKNIIELGHEFGTSKSGNG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K N+E+VSANPTG +H+GH R A +GD+L  ++  +GY+VTREYY+NDAG QI+ L +S
Sbjct: 121 LKYNVEYVSANPTGDLHLGHARGAALGDSLCRILTKAGYDVTREYYVNDAGNQIHNLVIS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + RY QAL   ++++PE  Y G  +  +G+ + ++Y   L+N  +E +  ++++ S++ 
Sbjct: 181 AYARYLQAL-GLEAEMPEDGYHGPDIIALGQSMVEQYGDRLVNKLDENY-KLIREMSLEY 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  IR DL    ++ D++ SE + +  D + +++ I  L  +G++YE            
Sbjct: 239 ELNKIRKDLDMFGVEFDMYTSEQELY--DNNLVQESIKLLEEKGFIYE------------ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               +   + FRST  GDD DR L KSDGSYTY   D+A    K +RG D ++ + G+DH
Sbjct: 285 ----EDGAVWFRSTDFGDDKDRVLKKSDGSYTYLTPDIANHIEKLKRGNDKLVDIWGADH 340

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ R++A   A+  +  ++ V + ++VRL +DG   KMSKR G  +T+R +VDEVG D
Sbjct: 341 HGYIARVKASMQALGYEADKLEVDIIQMVRLIKDGEEFKMSKRTGKAVTIRELVDEVGVD 400

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VR+  + R     +DFD     ++S ENPV+Y QYA+AR  SI RQA++   +++    
Sbjct: 401 AVRYFFVMRSGETQMDFDLDLATKKSNENPVYYAQYAHARTCSILRQAEEKGFNVELKDQ 460

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             ++          E ++I  + ++P V+ +A   + P+ +  Y+ DLA+ FH  ++   
Sbjct: 461 YNHI------THEKEFEVIKLMGDFPIVVADAANKRRPHLICNYINDLATAFHSLYNAE- 513

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + +   N + T  +L L+ A+   I + L +IGV +P  M
Sbjct: 514 -----KVINEENVEKTNEKLALIKALEITIKNALELIGVSAPERM 553


>gi|218885953|ref|YP_002435274.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701474|sp|B8DNX4|SYR_DESVM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218756907|gb|ACL07806.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 551

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 208/579 (35%), Positives = 321/579 (55%), Gaps = 32/579 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             +L   L+ I   + +     ++  +E PRD + G L+ N A+++S+  G+ P  +A  
Sbjct: 4   RQQLLASLQAIVKDMGL--SWPEKATLEPPRDKSFGDLAANIALVISKDAGVPPRELASR 61

Query: 68  IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +   +   DP + SV IAG GF+N+  SP + R+ +  +  +G  YG   +G G K  +E
Sbjct: 62  LAGALRDSDPAIASVDIAGPGFLNVTYSPDFWRETVLHVEAAGDRYGATAVGAGRKAQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +GD LA ++ F+GY+VT EYYINDAG Q+  L LSV+ R  
Sbjct: 122 YVSANPTGPLHIGHGRGAALGDCLARVLRFAGYDVTTEYYINDAGRQMRLLGLSVWLRAL 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L      LPE +Y G Y+K +  E+  K    L++ PE +      +Y++ ++M  I+
Sbjct: 182 E-LSGRPFTLPEDFYRGDYIKDIAAEMLAK-DPGLVDLPEAEGQDRCFEYAMNSIMDGIK 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    ++H ++ SE    R     +    + L   G  +E                  
Sbjct: 240 QDLADFRVEHQVWFSELSLVR--EGAVEKTFERLKAAGLAFE----------------QD 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FR+T +GDD DR L KSDG+ TYFA+D+AY   KY+RGFD ++ + G+DH GYV R
Sbjct: 282 GALWFRTTTLGDDKDRVLRKSDGTLTYFASDIAYHDNKYDRGFDLVVDIWGADHHGYVPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A  AA+ ++  Q +V+L +LV L ++G  I MS RAG F TL  VV EVG+D+ RFM 
Sbjct: 342 MRAAVAALGKRPEQFDVILVQLVNLLQNGEQIAMSTRAGQFETLHDVVREVGADAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK++S +NPV+YVQYA+AR  ++ R+A +    L   L    + P
Sbjct: 402 LSRKSDSHLDFDLELVKQRSMDNPVYYVQYAHARVCAVLRKAAERAIVLPARLDAAALAP 461

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   EL L+  +   P  +  A     P+ ++FYL ++A   H +++      ++ 
Sbjct: 462 LTL---PEELDLLRLVDRMPDTLSAAAEGLAPHHVSFYLMEVAGALHSYYA------KVP 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A + +  + RL L+ AV   + +GLN++GVE+P  M
Sbjct: 513 VLNAADAETIVARLALLRAVGQAVANGLNLLGVEAPEAM 551


>gi|194364058|ref|YP_002026668.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693501|sp|B4STE2|SYR_STRM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194346862|gb|ACF49985.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 562

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 189/587 (32%), Positives = 305/587 (51%), Gaps = 37/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P  +A
Sbjct: 5   LRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDFATNAAMLLAKAARSNPRALA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +V  +    DV  V IAG GFIN YL+P+  ++  +S++  G +YGRNL G G  V +
Sbjct: 65  QALVEALPRSEDVSKVEIAGPGFINFYLAPAAYQREAASVIKEGHDYGRNLSGNGRTVGV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+HVGH R A +GD +A ++  +G+   RE+Y NDAG QI  L+LSV  R 
Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNAKREFYYNDAGVQIENLSLSVQAR- 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + +  +    PEG Y G Y+  V +        D   + ++   + K +  ++ ++V  
Sbjct: 184 VKGIAPDQDGWPEGGYRGEYIADVARAYMAGASVDLEGTLVVGAKDAKDMQAIRRFAVAY 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +      DL A  +  DI+  E   +      + + +  L   G+ YE            
Sbjct: 244 LRNEQNLDLAAFGVDFDIYFLESSLYA--DGKVAEAVAKLQASGHTYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               +   L  RST  GDD DR + KSDG++TYF  D+AY   K++RG++  I  +G+DH
Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGYERAITELGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
            G + R+ A   A+     +     +L ++V + R G  +K+SKRAG + TLR +++E G
Sbjct: 346 HGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ ++ RK    L FD    ++QS +NPVFYVQYA+AR  S+ RQA++     +  
Sbjct: 406 RDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKGLVYEQG 465

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +       D + L L+  ++ YP V+E A +A EP+ +A YL +LA  FH  +  
Sbjct: 466 ---NGLANLGRLSDDASLLLMNEISRYPEVVEAAGVALEPHLVAQYLRELAHAFHTWYHG 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 523 T-------PVLVDDSADRNAKLTLACAARQVLANGLELLGVSAPEKM 562


>gi|126436460|ref|YP_001072151.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|166232809|sp|A3Q3D3|SYR_MYCSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126236260|gb|ABN99660.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 550

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 191/582 (32%), Positives = 286/582 (49%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+     +  +  ++   L   + +ERPR+  HG  +TN A+ + + +G++P  
Sbjct: 4   ADLADLLRTTATAVLTERDLDTAALPATVTVERPRNPEHGDYATNLALQVGKKVGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GF+NL +  +    I+  I+ S   YG +       +
Sbjct: 64  LAGWLAEALTAAAGIASAEVAGPGFVNLRIEAAAQNVIVGDIITSAERYGHSAALAERNI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+A  G  V REYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLATQGAAVVREYYFNDHGAQIDRFVSSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  K     L  P+ +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGSYIGDIAAQVLAK-DPGALELPDGEMRETFRAIGVDLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D+F  ED  H      + + I  L   G +YE               
Sbjct: 237 HIKISLHDFGTDFDVFTHEDSMHT--SGRVEEAIARLRENGAIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T  GDD DR ++KSDG+  Y A DLAYF  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTTDFGDDKDRVVIKSDGAPAYIAGDLAYFLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +    + V++ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGDDPDTVEVMIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A D+    D       
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAADLGVVAD------- 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               +      E  LI +L E+PRV+E+A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 452 TARLDLLTHDKEGTLIRNLGEFPRVLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEAPGSLHQARLALCQATRQVIANGLAILGVSAPERM 550


>gi|317487839|ref|ZP_07946432.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316913114|gb|EFV34630.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 578

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 182/600 (30%), Positives = 308/600 (51%), Gaps = 40/600 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +   +        +  +      +ERPRD ++G  ++  AM  ++    +
Sbjct: 4   MQIREQLEQLIDAAVAAACEDGTLTLEQAPEAALERPRDESNGDWASTVAMRSAKLAKKN 63

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA++IV  +  +  + SV IAG GFIN+ L+ + L+ ++++      ++G+  I +G
Sbjct: 64  PREIAQIIVDHLPENDMIASVDIAGPGFINIRLANAVLQGVVAAARAEKDDFGKGEIPEG 123

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+N+E++SANPTGP+HVGH R A +GD  A +M  +GY+V  E+YINDAG Q++    
Sbjct: 124 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 183

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RYQQ L   D ++PE  Y G Y+K + + + D+   + L+   ++ +   ++ +  
Sbjct: 184 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQTIIDEDGDKWLDADPKERMENFRERAYA 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296
             +       +        + SE   +  D      +   +  +  +GY+Y         
Sbjct: 243 YELAEQHRVTERFGTTFGCWFSERSLYVPDEDGLSAVDRSLKAMDEKGYIY--------- 293

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                  ++     FRS+   D+ DR L+K++G  TYF +D+AY   K ERGFD++I + 
Sbjct: 294 -------VEDGATWFRSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 346

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R EA+ AA       + ++L +LV L+RDG  ++MSKR G+ IT   ++DE
Sbjct: 347 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 405

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469
           VG D+ R++ML + + + +DFD    K++   NPV+YVQYA+AR  SI R+         
Sbjct: 406 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEA 465

Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
               D+  D     VIP   +       SEL L+  + ++  ++  A   +  ++L  Y 
Sbjct: 466 AANGDMSMDDLASKVIPANVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 525

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLAS+FH  +++         V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 526 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 578


>gi|319948886|ref|ZP_08022998.1| arginyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437445|gb|EFV92453.1| arginyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 550

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 197/582 (33%), Positives = 299/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ ++  L  +  +   +  ++   + +ERPR+  HG  +TN A+ L++ +G  P  
Sbjct: 4   ADLAAVIRAALIAVLTERGADTSVVPETVTVERPRNPEHGDYATNVALQLAKKIGSAPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A+ +   +  DP + S  IAG GF+N+ L       ++++++  G  YG      G +V
Sbjct: 64  LAQALADALAQDPGIASAEIAGPGFLNIRLDSGAQGSLVATVLEKGERYGYGDAMAGRRV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++  SG EVTREYY ND GAQI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLEASGAEVTREYYFNDHGAQIDRFSRSLAA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +        + PE  Y G Y++ +  ++   +   +L+ PE++ L   +   V  M  
Sbjct: 184 AAR------GEETPEDGYAGAYIQDIAAQVMTAH-PGVLDMPEDQALETFRAAGVDLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+D L       D++  E+         +   I+ L   G +YE               
Sbjct: 237 HIKDSLAEFGTVFDVYTHENSMFT--SGAVDRAIETLKGNGNLYES-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR +LKSDG   Y A D+AYF  K ERGFD  IY++G+DH GY
Sbjct: 281 --EGAWWLRSTAFGDDKDRVVLKSDGDAAYIAGDIAYFLDKRERGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+ +  A I VL+ ++V L RDG P+KMSKRAG  ITL  +VD +G D+ R
Sbjct: 339 IARLKAAAAALGDDPATIEVLIGQMVNLVRDGEPVKMSKRAGTVITLDDLVDAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D       + +NPVFYVQYA+AR  S+ R A D+    +       
Sbjct: 399 YALIRSSVDQTMDIDLKLWTSATNDNPVFYVQYAHARLCSLARNAADLGVTTEGADLAL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +  E  LI  + E+PRV+ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 458 ------LVEDREGALIRTIGEFPRVVASAADLREPHRVARYLEELAGAYHRFYDTCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      L   RL L  A    + +GL +IGV +P  M
Sbjct: 512 MG---DEEPGPLHAARLALSSATRQTLANGLRLIGVTAPERM 550


>gi|253997684|ref|YP_003049748.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253984363|gb|ACT49221.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 552

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 192/586 (32%), Positives = 300/586 (51%), Gaps = 41/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L      I  E   L+ I++ERP+   HG  +TN A+IL++PL  +P  IA 
Sbjct: 1   MKTHLTQLLTAAAKSIAPELTDLN-IILERPKSADHGDFATNLALILAKPLKQNPRAIAT 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +     +    IAG GFIN +LSP   + ++  I+ +G +YGRN  GK  KV +E
Sbjct: 60  QIIEALPTSEYIAKTEIAGAGFINFFLSPQSKQVVIKDILNAGAQYGRNSSGKQQKVQVE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD LA L+  +G++VTRE+Y NDAGAQI+ L +SV  R  
Sbjct: 120 FVSANPTGPLHVGHGRGAAVGDCLARLLDANGWDVTREFYYNDAGAQIDNLTISVLARC- 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-----ELLNFPEEKWLPIVKDYSVQAM 241
           + +       PE  Y G Y+  +      K++      E+    +   L  ++ +SV  +
Sbjct: 179 KGISTEHESFPENGYRGEYINDIAAAFLAKHTVVADDIEVTASGDINDLNSIRAFSVAYL 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DLKA  I+ D+F  E   +      +   +  L + G+ YE             
Sbjct: 239 RHEQDLDLKAFQIKFDVFSLESALYT--TGKVEQTVQALIKSGHTYE------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++T  GDD DR + K+DG YTYF  D+AY   K+ RGF  +I   G+DH 
Sbjct: 284 ---QDDALWLKTTDFGDDKDRVMRKTDGGYTYFVPDVAYHTDKWNRGFVRVINEQGADHH 340

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A   A+     +   + +L ++V + R G  +K+SKRAG ++TLR +++EVG 
Sbjct: 341 STITRVRAGLQAMDIGIPQGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R+    L FD    + QS +NPV+Y+QYA+AR  S+  Q        + D+
Sbjct: 401 DATRYFLAARRADSQLVFDIDLARSQSNDNPVYYIQYAHARICSVLSQW-------NGDV 453

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +         E  L+  L+EYP ++ N+     P+ +A YL +LAS  H +++  
Sbjct: 454 SSLAHVNLNPLTTAHETALMQRLSEYPEIVANSATELAPHVVANYLKELASDLHSYYNEY 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           + +L + RL L+ A   ++ +GL+++GV +   M
Sbjct: 514 KF-------LIEDEQLKLARLSLISATQQVLKNGLDLLGVTAKERM 552


>gi|282928743|ref|ZP_06336338.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282589626|gb|EFB94713.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 553

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PCEIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ +AL +N   +PE  Y G  +  +GK+LA+K+  E+ ++ EE  L   +   V+
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M  +++DL   N   D + SE   +  +   I +++  +   GY YE           
Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T   DD DR L+K+DG+YTYF  D+AY   K +RG D +I + G+D
Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL  +G  +KMSKR G+ ITLR ++DEVG 
Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    KEQS++NPV+Y QYA+AR  SI +QAK+   ++    
Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +       +   ++L+  +A++   IE+A   +  +++  Y+ DLA+ FH  ++  
Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + T   + ++ AV   + + L ++GV +P  M
Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553


>gi|134102736|ref|YP_001108397.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007807|ref|ZP_06565780.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|166232837|sp|A4FN47|SYR_SACEN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|133915359|emb|CAM05472.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 553

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 200/583 (34%), Positives = 303/583 (51%), Gaps = 35/583 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A  +  L+N   ++     ++  ++   + +ERPR+  HG  +TN AM +++  G+ P  
Sbjct: 4   AALAELLRNTAVDVLASRDLDTSVIPAAVTVERPRNPEHGDYATNIAMQVAKKAGVAPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +DSV +AG GF+NL L+     +IL  ++ +   YGR    +G KV
Sbjct: 64  LAGWLAEALTGQDGIDSVEVAGPGFLNLRLAADAQGQILREVLDATDAYGRGAKYQGLKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L   +   G EVTREYY NDAGAQI+    S+  
Sbjct: 124 NLEFVSANPTGPVHLGGTRWAAVGDALGRTLEAQGAEVTREYYFNDAGAQIDRFVRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++ +   +  L+ PE +     +   V  M  
Sbjct: 184 AAR------GEAAPEDGYGGAYIGEIANQVLEAEPTA-LDLPEAERHETFRRIGVGLMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            ++  L    +  D++  ED  H      +   ++ L   G++Y                
Sbjct: 237 EVKRSLHDFGVDFDVYFHEDSLHT--SGAVEKSVEQLKESGHLYFA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR L+KSDG+  Y A D+AY + K  RGFD  IY++G+DH GY
Sbjct: 281 --DGAWWLRSTEFGDDKDRVLIKSDGTTAYIAGDVAYLRDKRNRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + VL+ ++V L +DG P++MSKRAG  + L  +VD VG D+ R
Sbjct: 339 IPRLKAAAAAFDDDPDAVEVLIGQMVNLVKDGKPVRMSKRAGTVLRLEDLVDAVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPR 482
           + ++       LD D   + ++S ENPVFYVQYA+AR  S+ R A  +  D         
Sbjct: 399 YSLIRSSVDSALDIDLDLISKRSNENPVFYVQYAHARLSSLQRNAASLGIDRGSVADADL 458

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++  E E D     LI  L EYPRV+ +A   +EP+++A YL DLAS +H  +   R  
Sbjct: 459 SLLTHEREGD-----LIRTLGEYPRVVRSAAELREPHRIARYLEDLASAYHKFYDACR-- 511

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L+        LT+ RLQL  A   ++ +GL ++GV +P +M
Sbjct: 512 -VLQPGDDQATPLTIARLQLCEAARQVLANGLGLLGVSAPEQM 553


>gi|325830658|ref|ZP_08164079.1| arginine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487404|gb|EGC89846.1| arginine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 575

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 182/600 (30%), Positives = 308/600 (51%), Gaps = 40/600 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +   +        +  +      +ERPRD ++G  ++  AM  ++    +
Sbjct: 1   MQIREQLEQLIDAAVAAACEDGTLTLEQAPEAALERPRDESNGDWASTVAMRSAKLAKKN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA++IV  +  +  + SV IAG GFIN+ L+ + L+ ++++      ++G+  I +G
Sbjct: 61  PREIAQIIVDHLPENDMIASVDIAGPGFINIRLANAVLQGVVAAARAEKDDFGKGEIPEG 120

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+N+E++SANPTGP+HVGH R A +GD  A +M  +GY+V  E+YINDAG Q++    
Sbjct: 121 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RYQQ L   D ++PE  Y G Y+K + + + D+   + L+   ++ +   ++ +  
Sbjct: 181 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQTIIDEDGDKWLDADPKERMENFRERAYA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296
             +       +        + SE   +  D      +   +  +  +GY+Y         
Sbjct: 240 YELAEQHRVTERFGTTFGCWFSERSLYVPDEDGLSAVDRSLKAMDEKGYIY--------- 290

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                  ++     FRS+   D+ DR L+K++G  TYF +D+AY   K ERGFD++I + 
Sbjct: 291 -------VEDGATWFRSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 343

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R EA+ AA       + ++L +LV L+RDG  ++MSKR G+ IT   ++DE
Sbjct: 344 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 402

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469
           VG D+ R++ML + + + +DFD    K++   NPV+YVQYA+AR  SI R+         
Sbjct: 403 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEA 462

Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
               D+  D     VIP   +       SEL L+  + ++  ++  A   +  ++L  Y 
Sbjct: 463 AANGDMSMDDLASKVIPANVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 522

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLAS+FH  +++         V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 523 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575


>gi|300781429|ref|ZP_07091283.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533136|gb|EFK54197.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 591

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 192/582 (32%), Positives = 291/582 (50%), Gaps = 30/582 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ ++    E      ++  ++   + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 39  ADLAATVRAITTETLDAHGLDSSVVPETVTVERPRNPEHGDYATNVALQVAKKAGTNPRE 98

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  ++  +   P++DS  +AG GFINL L  +    I++ I+  G  YG + I  G K+
Sbjct: 99  LAGWLIDALVALPEIDSADVAGPGFINLRLGAAATGGIVADILAKGEAYGSSDIYDGEKI 158

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++ FSG EVTREYY ND G QI+  A S+  
Sbjct: 159 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVA 218

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   +  + +  +L           +   V+ M  
Sbjct: 219 AAKN------EPTPEDGYGGEYIADIASAVVAE-NPGILEGDAAVVQEAFRREGVEKMFA 271

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D+F  E+     +   +   I  L   G +YE               
Sbjct: 272 QIKQSLHDFGTDFDVFFHENSLF--ESGAVDRAIQTLKDNGNLYEN-------------- 315

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR +LKSDG   Y A D+AY   K++RG    IY++G+DH GY
Sbjct: 316 --DGAWWLRSTDFGDDKDRVVLKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGADHHGY 373

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A A A+      + VL+ ++V L RDG P+KMSKRAG  ITL  +VD +G D+ R
Sbjct: 374 IARLRAAAQALGYNPEAVEVLIGQMVNLVRDGQPVKMSKRAGTVITLDDLVDVIGVDAAR 433

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + M+       LD D    ++QS +NPV+YVQY + R  SI R+A +    L        
Sbjct: 434 YSMVRSSVDSTLDIDLDLWEKQSNDNPVYYVQYGHTRLASIERKAAEAGVVLARSDDDEE 493

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V          E  LI  L E+P V++ A   +EP+++A Y  +LASVFH  +   +  P
Sbjct: 494 V-DLSLLTHEKEGDLIRTLGEFPAVVKAAAELREPHRIARYAEELASVFHKFYDACQILP 552

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      + + +   RL L  A   ++ + L ++GV +P  M
Sbjct: 553 K---AGEDPQPIHAARLTLASASRQVLANALRLLGVTAPERM 591


>gi|257791691|ref|YP_003182297.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475588|gb|ACV55908.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 575

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 182/600 (30%), Positives = 308/600 (51%), Gaps = 40/600 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +   +        +  +      +ERPRD ++G  ++  AM  ++    +
Sbjct: 1   MQIREQLEQLIDAAVAAACEDGTLTLEQAPEAALERPRDESNGDWASTVAMRSAKLAKKN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA++IV  +  +  + SV IAG GFIN+ L+ + L+ ++++      ++G+  I +G
Sbjct: 61  PREIAQIIVDHLPENDMIASVDIAGPGFINIRLANAVLQGVVAAARAEKDDFGKGEIPEG 120

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+N+E++SANPTGP+HVGH R A +GD  A +M  +GY+V  E+YINDAG Q++    
Sbjct: 121 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RYQQ L   D ++PE  Y G Y+K + + + D+   + L+   ++ +   ++ +  
Sbjct: 181 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQTIIDEDGDKWLDADPKERMENFRERAYA 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296
             +       +        + SE   +  D      +   +  +  +GY+Y         
Sbjct: 240 YELAEQHRVTERFGTTFGCWFSERSLYVPDEDGLSAVDRSLKAMDEKGYIY--------- 290

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                  ++     FRS+   D+ DR L+K++G  TYF +D+AY   K ERGFD++I + 
Sbjct: 291 -------VEDGATWFRSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 343

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GY+ R EA+ AA       + ++L +LV L+RDG  ++MSKR G+ IT   ++DE
Sbjct: 344 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 402

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469
           VG D+ R++ML + + + +DFD    K++   NPV+YVQYA+AR  SI R+         
Sbjct: 403 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEA 462

Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
               D+  D     VIP   +       SEL L+  + ++  ++  A   +  ++L  Y 
Sbjct: 463 AANGDMSMDELASKVIPANVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 522

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            DLAS+FH  +++         V      +T  RL LV A   ++   L+++GV +P +M
Sbjct: 523 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575


>gi|325673536|ref|ZP_08153227.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325555557|gb|EGD25228.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 550

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L   + +ERPR+  HG  ++N AM +++  G +P  
Sbjct: 4   ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     +DS  +AG GF+N+ L+      I++  + SG  YG      G ++
Sbjct: 64  LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q          PE  Y G Y+  +  ++  K     L+ PE +     +   V+ M +
Sbjct: 184 AAQ------GEPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +Y                
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + V++ ++V L R G+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D       + ENPV+YVQYA+AR  SI R A D+   L  +     
Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADLG--LGTENPNLG 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  +AEYPRV+  A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL L  A   ++ +GL ++GV +P  M
Sbjct: 512 QG---DEEATDLTTARLALCAASRQVLANGLELLGVSAPERM 550


>gi|41408568|ref|NP_961404.1| arginyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81413777|sp|Q73X40|SYR_MYCPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|41396926|gb|AAS04787.1| ArgS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 550

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 191/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+N    +  +  ++   L   +V+ERPR+  HG  ++N A+ L + +G +P  
Sbjct: 4   ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + S  +AG GFINL L  S    ++++++ +G  YG +       +
Sbjct: 64  LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  +     L+ PE +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVLRQAPDA-LSLPEPQLRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA  +  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A ++           +
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELG-------LIPD 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 452 TAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550


>gi|153005149|ref|YP_001379474.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|166232753|sp|A7HCP4|SYR_ANADF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152028722|gb|ABS26490.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 605

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 228/603 (37%), Positives = 342/603 (56%), Gaps = 35/603 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
              R+    ++   K   E +         +E PRD  HG  + NAAM+L++  G  P  
Sbjct: 2   VKDRVIELFRQALAKGAAEGRWPALEASFSVEAPRDPKHGDFAVNAAMVLAKAAGKPPRD 61

Query: 64  IAELIVARIKIDPDVDSV---FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           +A+ I A ++       +    +AG GFIN+ L+P    + L  +V  G  YGR  +G+G
Sbjct: 62  LAQAIAAEVRAVDAQHEIAGLEVAGPGFINVRLAPDVWLRALGRVVAEGTAYGRTEVGRG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+VSANPTGPMHVGH R AVVGD + SL+ ++G+EVTREYY+ND GAQ+ TLA S
Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQSLLRWAGFEVTREYYVNDYGAQVQTLARS 181

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RYQ+ L+     +P   YPG Y+K V   L  ++    L+ PE +WL + +D +V+ 
Sbjct: 182 VHLRYQE-LFGRQVTMPPKSYPGEYVKDVAAALKAEHGDRWLDAPEAEWLALFRDRAVEH 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK--- 297
           ++ +IR+DL+A+NI+ D + SE   +  +   +   +  LA +  VY G LPPPKSK   
Sbjct: 241 VLGLIREDLRAVNIEFDRWYSEKALY--ESGTVDRFLRFLAEKDLVYVGKLPPPKSKKGQ 298

Query: 298 --------------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                           +         LFRS+  GD+VDRP+ K+DG+ TYF AD+AY   
Sbjct: 299 PAPAQAASNSAHDLGEEGIAASDDLTLFRSSQYGDEVDRPVKKADGTTTYFCADIAYHWD 358

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           K +R  D ++ V+G+DH GYV RLEA   A+   +  ++V+L ++V L R G  +KMSKR
Sbjct: 359 KRQR-ADALVDVLGADHGGYVPRLEAALEALGASRKDLHVVLIQMVNLTRGGEAVKMSKR 417

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           AG  ++LR VVDEVG D+ RF+ L R++   LDFD    K Q+ +NPVFYVQY +AR   
Sbjct: 418 AGTVVSLREVVDEVGRDATRFIFLTRRSDAQLDFDIELAKRQTLDNPVFYVQYGHARLAQ 477

Query: 464 IFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           IF +A++    + +FDL     +         E  LI  +  +P ++  A +A EP+++A
Sbjct: 478 IFAKAREAGAPVPEFDLEAARTLT-----SAEEQDLIRRIVAFPDMLAAAALAYEPHRVA 532

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           FYL +  + FH +++ G+       V + + + T  RL L  A+  ++ +GL ++GV +P
Sbjct: 533 FYLQETIAAFHSYYTQGKRTGER--VISADARKTAGRLFLCRALKQVLANGLGLLGVAAP 590

Query: 583 NEM 585
             M
Sbjct: 591 ERM 593


>gi|119474652|ref|ZP_01615005.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450855|gb|EAW32088.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 580

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 199/605 (32%), Positives = 304/605 (50%), Gaps = 55/605 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + I  RI ++R RD +HG L++N AM L++     P  IA+
Sbjct: 5   IEQLIRAALTDLINDGSLPEGIEPRISVDRTRDKSHGDLASNIAMTLAKAAKKPPKDIAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V    IAG GFIN YL+ +    ++  I+  G  YGR   GKG KV +E
Sbjct: 65  LIINALPASTQVSKAEIAGPGFINFYLNEAAAAAVVIDILSQGKNYGRCNDGKGKKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD++  L+  +G++VT E+Y NDAG QI+ LA SV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAVGDSICRLLDAAGWDVTAEFYYNDAGQQISNLAGSVQARC- 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + L   D   PE  Y G Y+  V       E  D     ++   +   L  + D++V  +
Sbjct: 184 KGLGPGDESWPEDGYQGSYINDVANSYMAKEKIDAEDKHVVGAGDADNLEAISDFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  +  D++  E   +  +   + D +  L   G+ YE             
Sbjct: 244 RREQDLDLKAFGVDFDVYYLESSLY--NEGKVADTVQQLINSGHTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKS---------------DGSYTYFAADLAYFKCKYE 346
                  L  ++T  GDD DR + KS               +G YTYF  D+AY   K++
Sbjct: 289 ---KEGALWLKTTDFGDDKDRVMRKSGVVETDPVSGNETRKEGGYTYFVPDVAYHLNKWQ 345

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIKM 400
           RGF+ ++   G+DH   + R+ A   AVS        +     +L ++V + R G  +K+
Sbjct: 346 RGFERVVNEQGADHHSTITRVRAGIQAVSQHNHLNIPQQWPEYVLHQMVMVMRGGEEVKI 405

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SKRAG +IT+R +VDEVG D+ R+ +  R  +  L FD      QS +NPV+Y+QYA+AR
Sbjct: 406 SKRAGSYITIRDLVDEVGKDATRYFLAARAANSQLTFDIDLAISQSNDNPVYYIQYAHAR 465

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             S+ R+  D        L   N    E   + +E  L+  L+ YP +I+NA I  EP+ 
Sbjct: 466 VCSMMRKLSDHQWSWSAKL---NSNTLEHLVEDAEKALMKKLSGYPELIKNAAIHSEPHT 522

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A YL +LA  +H +++  +          ++  L   RL L  +V  +I +GL+++GV 
Sbjct: 523 VANYLRELAGDYHSYYNAHKT-------LVDDDDLRNARLSLSESVRQVIENGLSLLGVS 575

Query: 581 SPNEM 585
           +P EM
Sbjct: 576 APAEM 580


>gi|227547994|ref|ZP_03978043.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079900|gb|EEI17863.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 550

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 190/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ ++     +     ++  ++   + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATAIRQATTTVLTDHDLDATVVPETVTVERPRNPEHGDYATNIALQVAKRAGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +V  +  DP + S  +AG GFINL L+     K+++ I+ +G  YGR+ I  G KV
Sbjct: 64  LAGWLVDALASDPAIASADVAGPGFINLRLAADAQGKLVADILEAGQNYGRSDIYAGEKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  +G EVTREYY ND G QI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAEVTREYYFNDHGGQIDRFARSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          P+  Y G Y+  +   + DK+    L   + +     +   V  M  
Sbjct: 184 AAK------GEPTPQDGYGGAYISEIAAGVVDKH-EGALEGTDAEVQETFRAAGVDMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    ++ D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKRSLADFGVEFDVYFHENSLF--ESGAVDKAVATLKDNGNLYES-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K++RG    IY++G+DH GY
Sbjct: 281 --DGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A A A+      + VL+ ++V L R+G P+KMSKRAG  ITL  +VD +G D  R
Sbjct: 339 IARLRAAAQALGYDADAVEVLIGQMVNLVRNGKPVKMSKRAGTIITLEDLVDAIGVDGAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +      + LD D      QS +NPV+YVQY +AR  SI R+A +    + F      
Sbjct: 399 YSLARSSVDQTLDIDLDLWTRQSSDNPVYYVQYGHARLCSIARRASEAG--VSFADPDLG 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L EYP V++ A   +EP+++A Y+ +LAS FH  +   +  P
Sbjct: 457 LLAHEKEGD-----LIRTLGEYPAVVKAAAELREPHRVARYVEELASSFHKFYDACQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ + L+++GV +P  M
Sbjct: 512 K---AGEDAEPIHEARLALAMATRQVLANALDLLGVSAPERM 550


>gi|312139159|ref|YP_004006495.1| arginyl-tRNA ligase args [Rhodococcus equi 103S]
 gi|311888498|emb|CBH47810.1| arginyl-tRNA ligase ArgS [Rhodococcus equi 103S]
          Length = 550

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L   + +ERPR+  HG  ++N AM +++  G +P  
Sbjct: 4   ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     +DS  +AG GF+N+ L+      I++  + SG  YG      G ++
Sbjct: 64  LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q          PE  Y G Y+  +  ++  K     L+ PE +     +   V+ M +
Sbjct: 184 AAQ------GEPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L   G +Y                
Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +      +ST  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +    + V++ ++V L R G+ +KMSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D       + ENPV+YVQYA+AR  SI R A D+   L  +     
Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADLG--LGTENPNLG 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  +AEYPRV+  A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL L  A   ++ +GL ++GV +P  M
Sbjct: 512 QG---DEEATGLTTARLALCAASRQVLANGLELLGVSAPERM 550


>gi|218782325|ref|YP_002433643.1| arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226701483|sp|B8FCL2|SYR_DESAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218763709|gb|ACL06175.1| Arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 556

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 220/580 (37%), Positives = 324/580 (55%), Gaps = 29/580 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  +     +   +  +    + +  +E P+  AHG  STN AM++++   + P  IAE
Sbjct: 5   LAEMITRAAFKAHEQGVLPSDAIPQPGLEEPKQEAHGDFSTNIAMVMAKVQKMAPRKIAE 64

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            IV  ++   +      IAG GFIN YL PS  ++++  I+  G EYGR+ IG G KV +
Sbjct: 65  AIVDNLEDPENFLVKTEIAGPGFINFYLRPSLWQRVVKGILDKGDEYGRSQIGAGQKVQV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A VGD LA+L+   G+EV REYYIND+G QI TL LS + RY
Sbjct: 125 EFVSANPTGPLHVGHGRGAAVGDALAALLDMCGFEVEREYYINDSGRQIRTLGLSTWLRY 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            + L   + D P+  Y G Y+K + K + D+  ++L +  EE  +     ++   ++  I
Sbjct: 185 CE-LKGKEIDFPKDCYQGDYIKDLAKRIQDENLADLDSMEEEDAVLWCARFAANDILDGI 243

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DLK   + HD++ SE   +  D + +++ +++  + G +YE                 
Sbjct: 244 KQDLKDFRVVHDVWFSEQSLY--DDNSVQNALEHFEKTGDIYE----------------K 285

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
                F++   GD+ DR +++++G  TYFA+D+AY K K++RGFD +I V G+DH GYV 
Sbjct: 286 DGAKWFKTEDRGDEKDRVVVRNNGLTTYFASDIAYHKNKFDRGFDRVIDVWGADHHGYVA 345

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R++A   AV   K    V+L +LV L RDG P+ M+ R G F TL  VV+EVG+D+ RF+
Sbjct: 346 RMKAAVDAVGRDKDAFEVVLVKLVNLLRDGEPLAMTTRGGTFETLADVVNEVGADAARFI 405

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L R     LDFD    K+Q+ ENPV+YVQY +AR  SI  +AKD    LDFD      I
Sbjct: 406 FLSRHYESPLDFDLELAKKQTNENPVWYVQYVHARICSIEAKAKDFPVSLDFDWDRDEEI 465

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            +E E     ++L+  LA YP V+E A    EP+++ FYL +LAS FH  +         
Sbjct: 466 LKEIEE----IRLMKALARYPEVVEGAARTLEPHRIVFYLRELASAFHSFYHDHMVLK-- 519

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +     LT  RL LV  V  +I +GL ++GV +P  M
Sbjct: 520 ---EDQTPVLTKARLDLVTTVRQVIRNGLALLGVSAPESM 556


>gi|254521562|ref|ZP_05133617.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719153|gb|EED37678.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 562

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 188/587 (32%), Positives = 304/587 (51%), Gaps = 37/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P  +A
Sbjct: 5   LRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDFATNAAMLLAKAARSNPRALA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +V  +    DV  V IAG GFIN +L+P+  ++  +S++  G +YGRNL G G  V +
Sbjct: 65  QALVEALPRSEDVSKVEIAGPGFINFHLAPAAYQREAASVIKEGHDYGRNLSGNGRTVGV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+HVGH R A +GD +A ++  +G+   RE+Y NDAG QI  LALS   R 
Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNAKREFYYNDAGVQIENLALSTQARI 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    + D   PEG Y G Y+  V +        D   S ++   +   +  ++ ++V  
Sbjct: 185 KGIAPDQDG-WPEGGYRGEYIADVARAYMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAY 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +      DL A  +  DI+  E   +      + + +  L   G+ YE            
Sbjct: 244 LRNEQNLDLAAFGVDFDIYFLESSLYA--DGKVAEAVAKLQASGHTYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               +   L  RST  GDD DR + KSDG++TYF  D+AY   K++RG++  I  +G+DH
Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGYERAITELGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
            G + R+ A   A+     +     +L ++V + R G  +K+SKRAG + TLR +++E G
Sbjct: 346 HGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ ++ RK    L FD    ++QS +NPVFYVQYA+AR  S+ RQA++     +  
Sbjct: 406 RDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKGLVYEQ- 464

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +       D + L L+  ++ YP V+E A ++ EP+ +A YL +LA  FH  +  
Sbjct: 465 --ANGLANLGRLADDASLLLMNEISRYPEVVEAAGVSMEPHLVAQYLRELAHAFHTWYHG 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    V  ++      +L L  A   ++ +GL+++GV +P +M
Sbjct: 523 T-------PVLVDDAADRNAKLTLACAARQVLANGLDLLGVSAPEKM 562


>gi|288917938|ref|ZP_06412298.1| arginyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350727|gb|EFC84944.1| arginyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 567

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 200/591 (33%), Positives = 308/591 (52%), Gaps = 37/591 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+ +  +   +++     +++  +   + IERPR   HG  ++  AM L++     P  +
Sbjct: 4   AELADSIVAAVRDAVAGGELDVPVPTTVTIERPRQPEHGDYASPVAMQLAKAARRPPRQV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AEL+ AR++  P V  V +AG GF+N+ L+ + L  I  ++V  G  YGR    +G +VN
Sbjct: 64  AELLAARLRTSPGVAEVEVAGPGFLNIRLAGAALGGIAQAVVRGGAAYGRATTPRGLRVN 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+ +   R A VGD LA ++A +GYEV  EYY+NDAG Q+     S+   
Sbjct: 124 LEFVSANPTGPVTLASTRWASVGDALARVLAAAGYEVGTEYYVNDAGVQVERFGASILA- 182

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------YSSELLNFPEEKWLPIVKDY 236
              AL    +  PE  Y G Y+  +   +            +       +EK L +    
Sbjct: 183 ---ALRGEPA--PENGYHGAYVAEIAARVVAANPGLEQLVAAGSGGQVADEKALAVCARD 237

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            V+ M+  IR  L    ++ D++ SE   H  +   +   I+ L  +G+V++        
Sbjct: 238 GVEMMLAEIRSTLAGFGVEFDLWKSERSLH--EAGELTAAIEELRAKGHVFDA------- 288

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       +  R+T  GDD DR L+KSDG  TYF AD AY++ K  RGFD + Y++
Sbjct: 289 ---------DGAVWLRTTDFGDDKDRALVKSDGHPTYFCADAAYYRDKRRRGFDRLCYLL 339

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G+DH GY+ RL A+AA   +   Q ++V++ +LV L R G+ +KMSKRAG F+TL  +VD
Sbjct: 340 GADHHGYIGRLRAIAACFGDDPEQTLDVIIGQLVTLSRGGVAVKMSKRAGTFLTLHDLVD 399

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG D+ R+ ++       LD D   +  Q+ +NPVFYVQYA+AR  S+ R A  +    
Sbjct: 400 AVGVDAARYSLVRASMDSSLDLDLDVIARQTNDNPVFYVQYAHARISSLIRNAAALGLAT 459

Query: 476 DFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
             D  F    +         E++L+  L E PRVIE+A   + P+++A YL +LA  +H 
Sbjct: 460 SADPAFDVEAVDVSLLTHQREVELLGALGELPRVIESAAALRAPHRIARYLEELAGTYHR 519

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P+          LT  RL LV A   ++ +GL+++GV +P  M
Sbjct: 520 FYDSCRVLPQG---DEEATVLTAARLLLVEATRVVLANGLHLLGVGAPERM 567


>gi|198282489|ref|YP_002218810.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665719|ref|YP_002424679.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226701628|sp|B7J3R6|SYR_ACIF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689961|sp|B5EL87|SYR_ACIF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|198247010|gb|ACH82603.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517932|gb|ACK78518.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 579

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 198/609 (32%), Positives = 317/609 (52%), Gaps = 56/609 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A  S  L+  L+++  + ++   I   + ++RP+   HGHL++N A++L++ +G  P 
Sbjct: 1   MKAFVSQALQGALQQLHAQGRIP-GIPATLELDRPKQVEHGHLASNVALLLAKAVGRKPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ IVA +     +    IAG GFIN +L P+    ++  +      +G N  G G +
Sbjct: 60  DIADDIVAALPASDWIARTEIAGPGFINFFLQPAAFHAVIHRVRTEKEHFGANRNGAGQR 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EFVSANPTGP+HVGH R A  G +LA+++ F+G+++  EYY+NDAG Q++ LA SV+
Sbjct: 120 LQMEFVSANPTGPLHVGHGRGAAYGASLANILRFNGFDIFCEYYVNDAGRQMDILAASVY 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------------------- 221
            RY +A        PE  Y G Y++ +   L ++    L                     
Sbjct: 180 LRYLEADKALPWPFPENGYRGDYVREIAAHLREQVGDRLRHAAVGLPNLPQMSDGDIAID 239

Query: 222 -----LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                L     +    +    +  ++  IRDDL+   + ++ + SE      D   +   
Sbjct: 240 TLIAHLKQSLGEDYRTLHSAGLDEILADIRDDLEGFGVHYERWYSEGSL--MDTGAVDSA 297

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +  L + G+ Y                     L FR+T   DD DR L + +G+YTYFA+
Sbjct: 298 VAALEKAGHCY----------------TQEGALWFRATAFDDDKDRVLRRDNGAYTYFAS 341

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D+AY   K+ RGF ++I + G+DH GYV R++A   A+     Q+ V+L +   LYR   
Sbjct: 342 DVAYHAEKFARGFTHVIDMWGADHHGYVPRVKAALRALGLDDQQLEVVLVQFAILYRGTE 401

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
            I MS RAG+F+TLR + +EVG+D+ RF  + R+  + LDFD    K+ S+ENPVFY+QY
Sbjct: 402 KISMSTRAGEFVTLRELREEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVFYIQY 461

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  S+ RQ+ +        L P + +  E   ++ E+ L   L  +P V+  A   +
Sbjct: 462 AHARVYSLLRQSVEKG----LSLPPADGVGLEILQESREIALADALWRFPEVVATAARDR 517

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP+++AFYL +LA+ FH +++  R       +      L   RL L  AVA  I +GL +
Sbjct: 518 EPHQIAFYLRELAAAFHTYYNSTR-------ILVEETPLRHARLTLCLAVAQSIANGLRL 570

Query: 577 IGVESPNEM 585
           +GV +P +M
Sbjct: 571 LGVSAPEQM 579


>gi|293374939|ref|ZP_06621235.1| arginine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646416|gb|EFF64430.1| arginine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 553

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 194/581 (33%), Positives = 328/581 (56%), Gaps = 36/581 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  + +K  +  + C    E   L+ +++E  +D +HG  STN AM L++    +P  IA
Sbjct: 8   NLKAEIKQAV--LTCGYITESDDLN-VILENSKDVSHGDYSTNIAMQLTKIAKKNPRMIA 64

Query: 66  ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E I+        +V+ + IAG GFIN ++  S   + + +I+  G E+G +  G G K N
Sbjct: 65  EEILNNFNAESANVEKIEIAGPGFINFFMKKSAFTQSIKNIIELGHEFGTSKSGNGLKYN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+VSANPTG +H+GH R A +GD+L  ++  +GY+VTREYY+NDAG QI+ L +S + R
Sbjct: 125 VEYVSANPTGDLHLGHARGAALGDSLCRILTKAGYDVTREYYVNDAGNQIHNLVISAYAR 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y QAL   ++++PE  Y G  +  +G+ + ++Y  +L+N  +E +  ++++ S++  +  
Sbjct: 185 YLQAL-GLEAEMPEDGYHGPDIIALGQSMVEQYGDKLVNKLDENY-KLIREMSLEYELNK 242

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IR DL    ++ D++ SE + +  D + +++ I  L  +G++YE                
Sbjct: 243 IRKDLDMFGVEFDMYTSEQELY--DNNLVQESIKLLEEKGFIYE---------------- 284

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   + FRST  GDD DR L KSDGSYTY   D+A    K +RG D ++ + G+DH GY+
Sbjct: 285 EDGAVWFRSTDFGDDKDRVLKKSDGSYTYLTPDIANHIEKLKRGNDKLVDIWGADHHGYI 344

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A   A+  +  ++ V + ++VRL +DG   KMSKR G  +T+R +VDEVG D+VR+
Sbjct: 345 ARVKASMQALGYEADKLEVDIIQMVRLIKDGEEFKMSKRTGKAVTIRELVDEVGVDAVRY 404

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + R     +DFD     ++S ENPV+Y QYA+AR  SI RQA++   +++      ++
Sbjct: 405 FFVMRSGETQMDFDLDLATKKSNENPVYYAQYAHARTCSILRQAEEKGFNVELKDQYNHI 464

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                     E ++I  + ++P V+ +A   + P+ +  Y+ DLA+ FH  ++       
Sbjct: 465 ------THEKEFEVIKLMGDFPIVVGDAANKRRPHLICNYINDLATAFHSLYNAE----- 513

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +   N + T  +L L+ A+   I + L +IGV +P  M
Sbjct: 514 -KVINEENVEKTNEKLALIKALEITIKNALELIGVSAPERM 553


>gi|291612598|ref|YP_003522755.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291582710|gb|ADE10368.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 558

 Score =  555 bits (1430), Expect = e-155,   Method: Composition-based stats.
 Identities = 192/592 (32%), Positives = 305/592 (51%), Gaps = 41/592 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    +F S L     +   ++         ++IERP+  +HG  + N AM L++PL   
Sbjct: 1   MSAVLNFKSHLSELFAQALREVA-PDHSGATVLIERPKQASHGDYACNLAMQLAKPLRKS 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  ++A +     ++ V IAG GFIN++++ +  + ++  ++ +G  YG   +G G
Sbjct: 60  PRDIANALIAALPKSDVIEKVEIAGAGFINVFITTAAKQDVVHGVLQAGAGYGHVHVGGG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+HVGH R A VGD L +++  +G+ VTRE+Y NDAG QI+ L LS
Sbjct: 120 RKVGVEFVSANPTGPLHVGHGRGAAVGDCLCNVLHAAGWNVTREFYYNDAGVQIDNLTLS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKD 235
           V  R  + +  +D   PE  Y G Y+  V      KE  +     +    +      ++ 
Sbjct: 180 VQLRC-KGITPDDPSWPESGYRGDYIVDVAKSYMAKETVEADDQHITGKGDVNDAEAIRH 238

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DL+A  ++ D+F  E   +      + + +  L   G+ YE       
Sbjct: 239 FAVAYLRREQDLDLRAFEVEFDVFSLESALYT--DGKVEETVQKLIASGHTYE------- 289

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  R+T  GDD DR + KSDG YTYF  D+AY   K+ RGF+ +I  
Sbjct: 290 ---------QDDALWLRTTDFGDDKDRVMRKSDGGYTYFVPDVAYHLDKWRRGFERVINE 340

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            GSDH   + R+ A   A+     K   + +L ++V + ++G  +K+SKRAG ++TLR +
Sbjct: 341 QGSDHHSTITRVRAGLQALDAGIPKGWPDYVLHQMVTVLKNGEEVKISKRAGSYVTLRDL 400

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DEVG D+ R+ +  R     L FD    K QS +NPV+Y+QYA+AR  ++  Q      
Sbjct: 401 IDEVGCDATRYFLAARHPDSQLVFDIDLAKSQSNDNPVYYIQYAHARISTVLAQW----- 455

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             + D                E QL+  + ++P+VIE A     P+ +AFYL +LA+ FH
Sbjct: 456 --NGDRLALLHADVGVLDSEYETQLLQRMIDFPQVIETAAEDLAPHLVAFYLKELAADFH 513

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++  R           + KL + RL L+ AVA ++ +GL ++GV +P +M
Sbjct: 514 SYYNASRF-------LVEDEKLKLARLALIAAVAQVLKNGLALLGVSAPEKM 558


>gi|29655291|ref|NP_820983.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|39932160|sp|Q83A98|SYR_COXBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29542563|gb|AAO91497.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 592

 Score =  554 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 209/615 (33%), Positives = 324/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 7   MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 66

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +
Sbjct: 67  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL----------------NFPE 226
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +                  N   
Sbjct: 187 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245

Query: 227 EKWLPIV----------KDY------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           E +L +           KD+      ++ +++  I++DL+   + +D +  E    R   
Sbjct: 246 EAYLDVWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 303

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                      FR+T +GD+ DR L++ +G 
Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 347

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 524

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 578 RNGLTLLGVSAPEEM 592


>gi|82703571|ref|YP_413137.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411636|gb|ABB75745.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 598

 Score =  554 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 203/608 (33%), Positives = 312/608 (51%), Gaps = 62/608 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S   + L+    +  +    LD I   RPR  +HG  S N AM L++PL   P  IA
Sbjct: 25  DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 83

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +       P ++ V IAG GFINL+L+ S  ++    ++ SG ++G + +G G K+ +
Sbjct: 84  QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 143

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA+++A +GY VTREYYINDAG Q++ LALS + RY
Sbjct: 144 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 203

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-------------EKWLP- 231
            + L    S  P   Y G Y++ + + +   ++   ++ PE             E  L  
Sbjct: 204 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 262

Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                          + ++ +   +   R+DL    +  DI+ SE      D   +   +
Sbjct: 263 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 320

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L    Y+Y+                      FRS+  GD+ DR + + +G +TYFA+D
Sbjct: 321 HLLEEGNYLYQ----------------QDGAKWFRSSHFGDEKDRVVQRENGQFTYFASD 364

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K+ RGFD +I + G+DH GY+ R++    A++    ++ + L +   LYRDG  
Sbjct: 365 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 424

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           + MS RAG+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+YVQYA
Sbjct: 425 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 484

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+  Q  +       D          +    +EL L+  L +YP  +E A     
Sbjct: 485 HARVCSVLEQWGE-------DPGMLVTADTSALTGAAELSLLQKLIDYPETVEAAAREFS 537

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ +AFYL +LA  FH +++  R              + + RL LV AV  ++N+GL ++
Sbjct: 538 PHLIAFYLKELAGEFHSYYNSTRF-------LVPEMTVRLARLALVAAVRQVLNNGLKLL 590

Query: 578 GVESPNEM 585
           GV +P +M
Sbjct: 591 GVSAPAKM 598


>gi|218460770|ref|ZP_03500861.1| arginyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 464

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 286/465 (61%), Positives = 357/465 (76%), Gaps = 2/465 (0%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA S
Sbjct: 1   RKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLARS 60

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           VF RY++AL     ++P G YPG YL  VG+ LA  Y   L N PE +W+PIVKD ++ A
Sbjct: 61  VFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEVQWMPIVKDRTISA 120

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  +
Sbjct: 121 MMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPE 180

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH
Sbjct: 181 DWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADH 239

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG D
Sbjct: 240 GGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRD 299

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           SVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP LD    
Sbjct: 300 SVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLDVSSE 359

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      D +ELQL+  LAE+PRV+E A  +QEP+++AFYLYDLAS FH HW+ G+
Sbjct: 360 DL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKGK 418

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   LRFV   NR+ ++ RL LV+AVAS++ SGL I G  +P+EM
Sbjct: 419 DQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 463


>gi|117927836|ref|YP_872387.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648299|gb|ABK52401.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 562

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 194/582 (33%), Positives = 309/582 (53%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  ++  ++      ++   +   +++ERP+    G  +TN A+ L++  G  P  +
Sbjct: 16  ADLADAIRRAIRAAVDADQLRVDVPAEVLVERPKRKEFGDYATNVALQLAKSAGRPPRDV 75

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A ++  ++   P + +V +AG GF+N+ L+      I   IV +G  YG +   +G ++N
Sbjct: 76  AAILAEQLAAQPGIAAVDVAGPGFLNIRLAAGAQGDIARQIVEAGPRYGTSTTLRGQRIN 135

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+GH R A VGD LA ++  +G EVTRE+YIND GAQ+     S+   
Sbjct: 136 VEFVSANPTGPLHLGHTRWAAVGDALARVLQAAGAEVTREFYINDRGAQMEKFGASL--- 192

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
              A       +P+  Y G Y+  + KE+A ++  E L+ P ++     +D   +  ++ 
Sbjct: 193 ---AAAAVGEPIPDDGYHGRYIHDLAKEIAGEH-PEFLDLPPDERAAAFRDEGYRRQLER 248

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R  L+   +  D++ SE   H  +   +   +D L RQG+VYE                
Sbjct: 249 QRRALEHFRVHFDVWFSERVLH--ESGAVEAALDELRRQGHVYEA--------------- 291

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +  R+T  GDD DR L++S+G  TYFAAD AY+  K  RGFD  +Y++G+DH GYV
Sbjct: 292 -DGAVWLRTTDFGDDRDRVLVRSNGEKTYFAADAAYYLDKRRRGFDTCLYLLGADHHGYV 350

Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+A+AA   +   + + VL+ +LV++ + G  +++SKRAG+ +TL  VVD  G D+VR
Sbjct: 351 ARLKAIAACAGDDPERTLEVLIGQLVKILKGGEEVRLSKRAGEIVTLEDVVDLAGVDAVR 410

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +        L  D   +  Q+ +NPVFYVQY  AR  S+ R A+D+  D       R 
Sbjct: 411 YSLARYPADSPLTLDVDLITRQTNDNPVFYVQYVAARTASVSRHARDLGID-------RG 463

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E+ L+  LAE+PR++ +A   +EP+++A YL +LA  +H  +   R  P
Sbjct: 464 AFDPTLLGHDREIDLLGALAEFPRIVASAAELREPHRIARYLEELAGTYHRFYDACRILP 523

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      LT  RL L  A   +I +GL ++GVE+P  M
Sbjct: 524 ---VGDEQPTPLTHARLWLNDATRIVIANGLELLGVEAPERM 562


>gi|148359603|ref|YP_001250810.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107645|ref|YP_003619346.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|226701418|sp|A5IDL4|SYR_LEGPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148281376|gb|ABQ55464.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295649547|gb|ADG25394.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 586

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 208/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     LK  L  +    ++   +   I +E  +D AHG  +TN A++L++P    P 
Sbjct: 1   MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE +VA I  DP V+ + IAG GFIN ++  +    I+S I+  G E+GR  +G+  K
Sbjct: 61  VLAERLVAVIPSDPSVEKIEIAGAGFINFFMRNTARSLIISEILNKGKEFGRGNLGQSQK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IEFVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA+SV+
Sbjct: 121 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228
            RY + L       P   Y G Y+  + +E+  +  ++ +        N P ++      
Sbjct: 181 LRYLE-LAGEPIVFPANGYKGQYVYEIAQEMWSEQGNQFVHPWISVVENLPADEPEGGDK 239

Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                    ++++ ++  I+DDL+A  ++ D + SE      + 
Sbjct: 240 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   I  L  +G+ YE                    L FR+T  GD+ DR L++++G 
Sbjct: 298 GSIEKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY+RGFD +I + G+DH GYV R++    A+   ++ ++V+L +   
Sbjct: 342 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR G  ++MS R+G F+TLR + +EVG+D+ R+  + RK  + +DFD    K +S +NP
Sbjct: 402 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+ RQ K+     D D+  +N+   E +    E  LI  +A YP VI+
Sbjct: 462 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HETTLISLIARYPEVIQ 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  + EP++LA+YL +LA+  H +++  +       +     +L   RL L+ +V  ++
Sbjct: 519 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 571

Query: 571 NSGLNIIGVESPNEM 585
           N+GL I+GV +P  M
Sbjct: 572 NNGLAILGVSAPESM 586


>gi|54297958|ref|YP_124327.1| arginyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81370250|sp|Q5X3M1|SYR_LEGPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53751743|emb|CAH13165.1| arginine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 589

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 207/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     LK  L  +    ++   +   I +E  +D +HG  +TN A++L++P    P 
Sbjct: 4   MKAIIEYLLKQALINLQQSGEMPIDLEVEIKVENAKDPSHGDYATNLALVLAKPCRQAPK 63

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE +VA I  DP V+ + IAG GFIN ++  +    I+S I+  G E+GR  +G+  K
Sbjct: 64  VLAERLVAVIPADPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGRGNLGQSQK 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IEFVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA+SV+
Sbjct: 124 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 183

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228
            RY + L       P   Y G Y+  + +E+  +  ++ +        N P ++      
Sbjct: 184 LRYLE-LAGEPIVFPTNGYKGQYVYEIAQEMWSEQGNQFVHPWISVVENLPADEPEGGDK 242

Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                    ++++ ++  I+DDL+A  ++ D + SE      + 
Sbjct: 243 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 300

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   I  L  +G+ YE                    L FR+T  GD+ DR L++++G 
Sbjct: 301 GSIEKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 344

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY+RGFD +I + G+DH GYV R++    A+   ++ ++V+L +   
Sbjct: 345 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 404

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR G  ++MS R+G F+TLR + +EVG+D+ R+  + RK  + +DFD    K +S +NP
Sbjct: 405 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+ RQ K+     D D+  +N+   E +    E  LI  +A YP VI+
Sbjct: 465 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HETTLISLIARYPEVIQ 521

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  + EP++LA+YL +LA+  H +++  +       +     +L   RL L+ +V  ++
Sbjct: 522 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 574

Query: 571 NSGLNIIGVESPNEM 585
           N+GL I+GV +P  M
Sbjct: 575 NNGLAILGVSAPESM 589


>gi|222152067|ref|YP_002561227.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121196|dbj|BAH18531.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 551

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 196/586 (33%), Positives = 317/586 (54%), Gaps = 36/586 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +K+   K ++  ++   I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIVQKQKETLIEEIKQAILKAELVTEV-PEIKIENPKDTKNGDYATNIAMVLTKLAKRN 59

Query: 61  PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +     DV  V IAG GFIN Y+  SYL  I++  +   +++G+    K
Sbjct: 60  PREIAQAIVDNLDVQKADVSKVDIAGPGFINFYMDNSYLTGIITEALTKKVDFGKGEP-K 118

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +E+VSANPTG +H+GH R A VGDTL+++++ +GY+V REYYINDAG QI  LA 
Sbjct: 119 DERILVEYVSANPTGSLHIGHARNAAVGDTLSNVLSAAGYDVLREYYINDAGKQIENLAY 178

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R+ QAL   D  LP   Y G  +  +GK+LA+K+  E  +  E + +   +   + 
Sbjct: 179 SIEARFLQAL-GEDKALPADGYHGKDIIEIGKDLAEKH-PEYKDVEEAERIKAFRKLGLD 236

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N+  D + SE   +  +   I   ++ + ++GY++E           
Sbjct: 237 YEMEKLKKDLTEFNVHFDNWFSETSLY--ENKKIDKALEQMRQRGYIFE----------- 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +      R+T  GDD DR L+K DGSYTYF  D+AY   K ERG+D +I + G+D
Sbjct: 284 -----EDGATWLRTTEFGDDKDRVLIKKDGSYTYFLPDIAYHYDKIERGYDTLINLFGAD 338

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A          ++ + + ++VRL +DG  +KMSKR G+ ITLR ++DEVG 
Sbjct: 339 HHGYINRLKASLETFGVDSKRLEIQVMQMVRLLQDGQEVKMSKRTGNAITLRDIMDEVGI 398

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R      DFD    K +S +NPV+Y QYA+AR  S+ RQAK+        +
Sbjct: 399 DAARYFLTMRSPDSHFDFDMELAKSESSDNPVYYAQYAHARICSMLRQAKEAG------I 452

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P          +    +L+  +A++  VIE A   + P+++  Y+ DLA+ FH  ++  
Sbjct: 453 TPSRDANYALITNEKAFELLKRVADFESVIEQAAEHRAPHRITNYIQDLAAHFHKFYNAE 512

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  ++ + +   + ++ AV   + + L ++GV SP +M
Sbjct: 513 K-------VLTDDIEKSRAYVAMIEAVRITLQNALTLVGVSSPEKM 551


>gi|298530549|ref|ZP_07017951.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509923|gb|EFI33827.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 551

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 196/584 (33%), Positives = 328/584 (56%), Gaps = 34/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +FA     ++ +L+E+  ++ +  K  D+  IE PR+ + G L+ N AM+L+   G  P 
Sbjct: 1   MFA--REYVEKHLREVVHELGL--KWPDKASIETPREKSFGDLACNLAMLLAGQAGEKPR 56

Query: 63  TIAELIVAR-IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +A       +     + S+ IAG GF+N    PS+ + I+  I      +G + +G+  
Sbjct: 57  DLAARFKDMMLGRAEKLQSIEIAGPGFLNFTFKPSFWQSIIPVIQKEQEGFGSSDLGRKH 116

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ +E+VSANPTGP+H+GH R A +GD+LA ++ F+G+E + EYY+NDAG Q+  L  SV
Sbjct: 117 KIQVEYVSANPTGPLHIGHGRGAALGDSLARILRFAGFEASTEYYLNDAGRQMYVLGDSV 176

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY+Q L   +++L   +Y G YL+   + L  ++  +LL    E  + + ++ +VQ++
Sbjct: 177 LIRYEQ-LCGLEAELSPDHYQGEYLQDDARALYQEHGRDLLKQDRESAIALCREKAVQSI 235

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I++DL+   ++H ++ SE      D   ++  ++ L  +   Y              
Sbjct: 236 LAGIKEDLEHFGVEHQVWFSEQGLF--DRGEVQKTLEWLQEKDMAY-------------- 279

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +    L FRST  GDD DR L KSDG+ TYFA+D+AY   K+ RGF+ ++ + G+DH 
Sbjct: 280 --IHDGALWFRSTSFGDDKDRVLQKSDGALTYFASDIAYHHNKFNRGFETVVDIWGADHH 337

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY  R++A   A+      + V+L +LV L R G  + MS R+G+F+TLR V++EVG D+
Sbjct: 338 GYAPRMQAAVQALGRPAGSLRVILVQLVNLLRAGQQVSMSTRSGEFVTLRQVMEEVGVDA 397

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF+ L RK+   LDFD  +VK++S +NPVFYVQYA+AR  S+F +A +       D  P
Sbjct: 398 CRFIFLSRKSDSHLDFDLEEVKKKSMDNPVFYVQYAHARICSVFAKAAERG----IDTGP 453

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                        +L L+  L  +P +++ A     P+ ++FYL +LA + H +++    
Sbjct: 454 EPQSLLHLLESQEDLDLLKQLEMFPDMVQAAARNLSPHHISFYLRELAGLLHRYYTVH-- 511

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + A++R+L   R+ L+ A A ++++GL ++GV +P +M
Sbjct: 512 ----SVLNADSRELIHARMLLLQATARVLSNGLKLLGVHAPEKM 551


>gi|289579360|ref|YP_003477987.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289529073|gb|ADD03425.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 561

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 202/590 (34%), Positives = 326/590 (55%), Gaps = 37/590 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +     + +K+     +K    +  +  + +  I IE P++  HG L+ N AMI+++  
Sbjct: 3   NIIQKVKNEIKDMVTTAIKNSVKEGLINIESIPEIEIEEPKEKQHGDLAINTAMIMAKQA 62

Query: 58  GLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + +AG GFIN +L+  +L + L  +   G +YGR  
Sbjct: 63  KMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEETLKLVYKRGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IGKG KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E+    + +Y
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDAPSEERRKTLVEY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL+   I++D++ SE   +  D   +  +I+ L ++GY YE        
Sbjct: 242 GLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++++G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++  ++    A+     +++V+L +LV+L   G  +KMSKR G  +TLR ++D
Sbjct: 344 WGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++     
Sbjct: 404 EVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEKVKIE 463

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D    +++ +E      E  LI  LA +P  I  A     P+++  Y+ D+AS+FH  
Sbjct: 464 NIDEVDLSLLKEE-----EEKDLIKKLAYFPEEITIAARTLTPHRITRYILDVASLFHSF 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V+     L   R  L+ AV ++I + L+I+ V +P  M
Sbjct: 519 YNSHR-------VKGVEENLMKARFVLILAVKTVIKNALDILKVTAPERM 561


>gi|161830885|ref|YP_001595968.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189083530|sp|A9N9G2|SYR_COXBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|161762752|gb|ABX78394.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 586

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 1   MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +
Sbjct: 61  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 121 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +            PEE       
Sbjct: 181 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 239

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            K    V   ++ +++  I++DL+   + +D +  E    R   
Sbjct: 240 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                      FR+T +GD+ DR L++ +G 
Sbjct: 298 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 342 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 402 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 462 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 519 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 571

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 572 RNGLTLLGVSAPEEM 586


>gi|223983739|ref|ZP_03633910.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM
           12042]
 gi|223964285|gb|EEF68626.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM
           12042]
          Length = 548

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 197/587 (33%), Positives = 316/587 (53%), Gaps = 41/587 (6%)

Query: 1   MY-LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M  +  +  + + N +K+    +  E      +VIE P++  HG  STNAAM L++ L  
Sbjct: 1   MNQIETNLKTCIINAVKQAF-DLDWESG---DVVIEIPKEKIHGDYSTNAAMRLTKQLRQ 56

Query: 60  DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +P  IA+ ++  + +    V    IAG GFIN ++  + L  ++  ++     YGR+  G
Sbjct: 57  NPRMIAQQLIDHLDLKQGSVAKCEIAGPGFINFFMESASLASVIGVVLQENENYGRSDAG 116

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KV++E+VSANPTG +H GH R A +GD++  LM F+GY+VTREYY+NDAG QI  +A
Sbjct: 117 QGLKVDVEYVSANPTGDLHPGHARGAAMGDSVTRLMKFAGYDVTREYYVNDAGNQIRNMA 176

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           LS+  RY QA    ++++PE  Y G  L  + ++L  +Y  +L +  + +     +   +
Sbjct: 177 LSLQARYLQAC-GVEAEVPEDGYHGPDLIKIAQDLKQEYGEDLAHKDKAETYSFFRQQGL 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           QA +  ++ DL A  ++ D++ SE   +  D   +   ++ L  QG  YE          
Sbjct: 236 QAELAKLKADLAAFGVEFDVWTSEQSIY--DRGMVDKALNTLKAQGMTYES--------- 284

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR L+KSDGSYTY   D+AY   K++RG+D +I   G+
Sbjct: 285 -------EGALWLRTTDFGDDKDRVLVKSDGSYTYLTPDIAYHVDKFDRGYDKLIDFFGA 337

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GY+ RL+A   ++ + K  + V + ++ R+ +DG   KMSKR G  + L+ +V+E G
Sbjct: 338 DHHGYIARLKAAVQSLGKNKDDLEVDIIQMARMVKDGEEFKMSKRTGKAVALKDLVEEAG 397

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+VR+  + R     +DFD    K+Q+ ENPV+Y QYA+AR  SI R   DI     ++
Sbjct: 398 VDAVRYFFVSRAADTHMDFDIDMAKKQTNENPVYYAQYAHARMCSILRSGADIPLADHYE 457

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L               EL L+ H+ E+   + +A   ++P+K+  Y+  LA +FH  ++ 
Sbjct: 458 LIT----------HEKELDLLKHINEFASTVADAAKTRQPHKMCNYITRLAQLFHTFYAD 507

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N +L+  RL LV A    + + L +IGV +P +M
Sbjct: 508 C------KVLDRTNLELSAQRLALVKASEMTLRNALTLIGVSAPEKM 548


>gi|52842248|ref|YP_096047.1| arginyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|81377147|sp|Q5ZTX7|SYR_LEGPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52629359|gb|AAU28100.1| arginyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 589

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 208/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     LK  L  +    ++   +   I +E  +D AHG  +TN A++L++P    P 
Sbjct: 4   MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 63

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE +VA I +DP V+ + IAG GFIN ++  +    I+S I+  G E+GR  +G+  K
Sbjct: 64  VLAERLVAVIPVDPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGRGNLGQSQK 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IEFVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA+SV+
Sbjct: 124 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 183

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228
            RY + L       P   Y G Y+  + +E+  +  ++ +        N P ++      
Sbjct: 184 LRYLE-LAGEPIVFPANGYKGQYVYEIAQEIWSEQGNQFVHPWISVVENLPADEPEGGDK 242

Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                    ++++ ++  I+DDL+A  ++ D + SE      + 
Sbjct: 243 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 300

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   I  L  +G+ YE                    L FR+T  GD+ DR L++++G 
Sbjct: 301 GSIEKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 344

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY+RGFD +I + G+DH GYV R++    A+   ++ ++V+L +   
Sbjct: 345 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 404

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR G  ++MS R+G F+TLR + +EVG+D+ R+  + RK  + +DFD    K +S +NP
Sbjct: 405 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+ RQ K+     D D+  +N+   E +    E  LI  +A YP VI+
Sbjct: 465 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HEATLISLIARYPEVIQ 521

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  + EP++LA+YL +LA+  H +++  +       +     +L   RL L+ +V  ++
Sbjct: 522 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 574

Query: 571 NSGLNIIGVESPNEM 585
           N+GL I+GV +P  M
Sbjct: 575 NNGLAILGVSAPESM 589


>gi|103485609|ref|YP_615170.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98975686|gb|ABF51837.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 580

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 256/584 (43%), Positives = 349/584 (59%), Gaps = 12/584 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L A     L   + ++     V   +    + +ERP D AHG LSTNAAM+L++  G  P
Sbjct: 5   LHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHP 64

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE +  R+ +  DV  V +AG GF+N+ L+    +  L+ I      YG + +G G 
Sbjct: 65  RQLAEKLAGRLAMLEDVADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGK 124

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            VNIEFVSANPTGPMH+GHCR AVVGD LA+L+AF+G+ V REYYINDAG Q++ LA S 
Sbjct: 125 TVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDILARSA 184

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY++AL  +  ++ EG YPG YLK VG+ LA  +     + PE  WL I +  +V AM
Sbjct: 185 HQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRARTVAAM 244

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M+ IR+DL  L I HD F SE D          D    L  +  VY+G+L PPK + ++ 
Sbjct: 245 METIREDLALLGISHDRFASEADLVA--AGKPDDAEAWLRERDLVYDGVLEPPKGEVSKD 302

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            +      LFRST  GDD DRP+ K DGS+TYF  DLAY   K  R  D +I + G+DH+
Sbjct: 303 WE-PIALPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEK-ARDADELIDIWGADHA 360

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G V R+ A A A++E + + +V L ++VRL R G P+KMSKRAG+F+TL  V+ EVG D 
Sbjct: 361 GTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVIREVGKDV 420

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRFMML RK    +DFDF  V E SK+NPVFYVQYA+AR  S+  +A +   +L      
Sbjct: 421 VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIEL------ 474

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
               P  +  D   L L+   AE+PR++E A  A+EP+++AF+L  LA+ FH  W+ G  
Sbjct: 475 -GDPPDLALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNA 533

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P  RF    N  ++  RL L  A+  +I +GL ++GVE  +EM
Sbjct: 534 DPTRRFAYPENLPVSRARLFLAAAIGQVIRNGLALMGVEPTHEM 577


>gi|237749364|ref|ZP_04579844.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380726|gb|EEO30817.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 571

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 203/599 (33%), Positives = 313/599 (52%), Gaps = 56/599 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++ +  I     +EK+    + +ERPRD +HG ++ N AM LS+PL  +P  IA+
Sbjct: 9   ISGLLQDAVNAIIDGQSLEKQ--PVVALERPRDASHGDIACNIAMQLSKPLKKNPREIAQ 66

Query: 67  LIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I++ +  +P      +S  IAG GFINL L+ S  + ++ +++    +YG +  G G K
Sbjct: 67  TILSSLMTNPLHQGLIESGEIAGPGFINLRLTASAKQDVVKAVMDQKDKYGYSNTGTGRK 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R   +GD++++L A  GY+VTRE+Y NDAG QI+ L LSV 
Sbjct: 127 VMVEFVSANPTGPLHVGHGRQGALGDSISALFASQGYDVTREFYYNDAGVQIDNLTLSVQ 186

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIVKDY 236
            R  + L   +   PE  Y G Y+  +  +       A +    +    +   L  ++++
Sbjct: 187 AR-AKGLKPGEEGWPESAYNGDYIADIATDFLAKKTVAARNCETVTASGDPDDLKSIREF 245

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +     +DL A  I  D F  E   +R     ++D +D L ++G  +E        
Sbjct: 246 AVAYLRNEQDNDLNAFGIHFDNFFLESSLYR--DGKVKDAVDTLTKEGKTFES------- 296

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ RGFD +I + 
Sbjct: 297 ---------EGALWLRTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKFSRGFDKVINIQ 347

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           GSDH G V R+ A    V     KA  + +L ++V + +DG  +K+SKRAG ++T+R ++
Sbjct: 348 GSDHHGTVARVRAGLQGVNKGIPKAFPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLI 407

Query: 415 DE-------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +         G D+VRF ++ RK      FD      QS ENPV+YVQYA+AR  S+F Q
Sbjct: 408 EWSGAGDVVRGRDAVRFFLISRKADTEFVFDVDLALSQSDENPVYYVQYAHARICSVFSQ 467

Query: 468 AKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                  LD  DL P             E  L+  L++YP ++  A     P+ +AFYL 
Sbjct: 468 WGGDESALDNVDLSP--------LTSPHEYALLSKLSDYPDILTRAQEELSPHLVAFYLR 519

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LA   HG+++  R           +  + + RL L+ A   ++ +GL ++GV +P +M
Sbjct: 520 ELAGELHGYYNAERF-------LVEDETVKLARLALLKATRQVLRNGLALLGVSAPTKM 571


>gi|212213468|ref|YP_002304404.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238065086|sp|B6J3D4|SYR_COXB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212011878|gb|ACJ19259.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 592

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 210/615 (34%), Positives = 322/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    ++ L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 7   MKQQIATLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 66

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + I+SSI+ +G +YGR+ +GKG +
Sbjct: 67  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTIVSSILKAGKDYGRSEMGKGQR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +            PEE       
Sbjct: 187 IRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            K    V   ++ +++  I++DL+   + +D +  E    R   
Sbjct: 246 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 303

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                      FR+T +GD+ DR L++ +G 
Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 347

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 524

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 578 RNGLTLLGVSAPEEM 592


>gi|58699209|ref|ZP_00374017.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534275|gb|EAL58466.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 568

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 257/586 (43%), Positives = 364/586 (62%), Gaps = 18/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + I +E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKRASSLILSKLNELKQRGIINTDTTNFI-VEPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ RY++AL      + +G YPG YLK +G+ LA KY  E L   + +   I+++Y++  
Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I++D+  L + HD+F SE +  +     I + I  L+ +G VYEG L  PK K ++
Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                RK++LFRST  GDDVDR L K  GS+TYFA+D+AY   K  RGF+NMI  +GSDH
Sbjct: 294 NWT-SRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRL+AV +A+S+ +A+I V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D
Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
             RF+ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L 
Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                         EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+
Sbjct: 473 RTGG----------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            +  +RF+  +N  LT        A+A +I SGL+I  +E   EMS
Sbjct: 523 SDLNMRFILEDNLNLTAAVCFSCRALAHVIASGLSIFNIEPLKEMS 568


>gi|87199111|ref|YP_496368.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|109895012|sp|Q2G9D9|SYR_NOVAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|87134792|gb|ABD25534.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 582

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 252/585 (43%), Positives = 351/585 (60%), Gaps = 18/585 (3%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            L ADF+  +   L  ++    +   +    +  E PRD +HG L+TNAAM+L++P G +
Sbjct: 7   NLHADFARVIDAALDALEAAGTLPGTLSRSAVTCEPPRDPSHGDLATNAAMVLAKPAGTN 66

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  + A ++ +P V S  IAG GFINL L+    R  L+ I  +G +YGR+ +G  
Sbjct: 67  PRALATALAAELEKEPRVVSAEIAGPGFINLRLTDDAWRGELALIGSAGADYGRSTMGGS 126

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             VN+E+VSANPTGPMH+GHCR AVVGD LA L+AFSG++V +EYY+NDAGAQ++ LA S
Sbjct: 127 KVVNVEYVSANPTGPMHMGHCRGAVVGDALADLLAFSGHQVIKEYYVNDAGAQVDVLARS 186

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY++AL     ++PEG YPG YL  VGK LA+++  +     E  WL + +  +V A
Sbjct: 187 VHMRYREAL-GETVEIPEGLYPGDYLVPVGKALAEEFGDKYAKAAEADWLILFRTRAVAA 245

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR DL  L I HD+F SE +        +      L     VY+G+L  PK KT +
Sbjct: 246 MMDMIRSDLATLGIHHDLFSSEAELQA--SGKVDAAEQWLRAHDLVYDGLLEAPKGKTPE 303

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +      LFRST  GDD DRP+ KS+G++TYF ADLAY   K +   D ++ + G+DH
Sbjct: 304 DWE-PVVLPLFRSTKFGDDQDRPIKKSNGAWTYFGADLAYHFQKAQT-ADALVDIWGADH 361

Query: 361 SGYVKRLEAVAAAV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +G VKR++A  AA+            V L ++V+L RDG P+KMSKR+G+F+TL  VV+E
Sbjct: 362 AGTVKRIKAAVAALTSADGGTPKPFEVKLVQMVQLLRDGEPVKMSKRSGNFVTLSDVVEE 421

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D VRF ML RK    +DFDF KV E SK+NPVFYVQYA+AR     R+  D      
Sbjct: 422 VGKDVVRFTMLTRKPDAQMDFDFAKVVEASKDNPVFYVQYAHARICRNLRKGADEGFAPS 481

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                             EL L+   A++PR IE A  A+EP+++AF+L+DLAS FH  +
Sbjct: 482 SANLD--------LLGDEELALVKLAAQFPRTIEAAAAAREPHRIAFFLHDLASAFHSFY 533

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           + G + P  RF+ A +  +T  RL L   +  +I +GL ++GVE+
Sbjct: 534 NLGNDRPDKRFIVAQDSAMTAARLFLAAQIGQVIRNGLAVLGVEA 578


>gi|260891979|ref|YP_003238076.1| arginyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864120|gb|ACX51226.1| arginyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 564

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 202/581 (34%), Positives = 312/581 (53%), Gaps = 32/581 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  L      + +    L    +E PR+   G  +TN A  L+   G  P  +A 
Sbjct: 14  LRQGLEKALAVTRSALSLPTTSLPPATLEVPREEGFGDFTTNLAFKLASRAGKPPREVAA 73

Query: 67  LIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           L+      D  P +D + +AG G++N YL P +L + L  I++ G +YGR  +G+  KVN
Sbjct: 74  LLAEHFPSDASPYLDRLEVAGAGYLNFYLKPHWLEEALREILLKGEDYGRQDLGRRRKVN 133

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTG +H+G+ R A +GD++A+L+AF G+EVTREYYINDAG QI   A S+  R
Sbjct: 134 VEFVSANPTGLLHMGNARGAALGDSIAALLAFCGFEVTREYYINDAGYQIERFAASLEAR 193

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y+QA +  D  +P   Y G  L    K    ++    L+   E+    +  ++++  ++ 
Sbjct: 194 YRQA-FGEDVPVPPDGYHGQDLVETVKRFISEHGDRYLHTSPEERREALVRFAIREKLEA 252

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IR+ L+   +  D++ SE + H      + + I+ L R+G  YE                
Sbjct: 253 IRNSLENFGVHFDVWFSEQELHA--SGKVAETIEELKRRGATYE---------------- 294

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L FR++  G   D  L++++G  TYFAAD+AY + K ERGF+ MI + G+DH G+V
Sbjct: 295 KEGALWFRASAYGAPKDDVLVRANGLPTYFAADIAYHRNKLERGFEWMINLWGADHHGHV 354

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A+     ++ V++ +LVRL R G  ++MSKRAG+++TL  ++ EVG D+ R+
Sbjct: 355 PRLKAALQALGYDPERLTVIIMQLVRLTRGGEAVRMSKRAGEYVTLDDLLAEVGKDAARY 414

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             +WR     LDFD    K QS ENPV+Y+QYA+AR  S+FRQ  +        L P   
Sbjct: 415 FFVWRSADAHLDFDLELAKAQSMENPVYYIQYAHARIASLFRQLAERGK----SLPPPEK 470

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I      +  E +L+  LA +P  +E A +   P++LA YL+DL+S+FH  ++  R    
Sbjct: 471 IDFSFLREPEERRLMYKLALFPEEVEGAALNLAPHRLAAYLHDLSSLFHSFYNEHR---- 526

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +      L   RL L  A   ++  GL ++G+ +P  M
Sbjct: 527 ---IIGAGSGLEEARLGLAAATQLVLRQGLKLLGISAPERM 564


>gi|295111752|emb|CBL28502.1| arginyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 572

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 198/577 (34%), Positives = 304/577 (52%), Gaps = 30/577 (5%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
             L+  +   K   + L    +ERPR    G  ++N AM L+R   + P  IA  I   +
Sbjct: 22  AALRTAEACGKELPEALS-FELERPRRADQGDRASNVAMQLARAFSMPPRDIAARIAGSL 80

Query: 73  KIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           +       D V +AG GFINL+LS  +  +  S ++  G  YG   +G+G +V +EFVSA
Sbjct: 81  QEGCQDLLDRVEVAGPGFINLFLSHRWFAEAASQVLQQGERYGAVDLGQGRRVQVEFVSA 140

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+GH R A VGD +A +++F+G+ V REYY+NDAG QI TL  S   RY +   
Sbjct: 141 NPTGPLHIGHGRGAAVGDAVARILSFTGWNVEREYYLNDAGLQIETLGRSTQARYFEVCG 200

Query: 191 NND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            ++ + LPE  Y G YL  + + +  +     L  P  + LP  + Y+   +++ IR+DL
Sbjct: 201 RSELAPLPEDGYKGDYLLDLAERIRKEEGDRFLATPLAESLPWFERYAADHILEGIREDL 260

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +   +  D + SE   +  +   +   +++L ++GY +E                    L
Sbjct: 261 ERFGVLFDSWFSEASLY--ERDLVSHAMEDLKKRGYAFES----------------NGAL 302

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLE 368
            F+ST   DD DR L++S+G  TYFA+D+AY   K+  RGFD +I V G+DH GYV R++
Sbjct: 303 WFKSTAFADDKDRVLIRSNGVPTYFASDVAYHHDKFVRRGFDRVIDVWGADHHGYVPRMK 362

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+         LL +LV L RDG  + MS RAG+F+TLR V+DEVG D+ RF  L 
Sbjct: 363 AAVEAMGRAPDDFKALLIQLVALKRDGKIVSMSTRAGEFVTLRSVLDEVGVDATRFFFLM 422

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R++   LDFD    K+QS +NPV+Y+QYA+AR  S+ R+ +    D+         +P  
Sbjct: 423 RRSDSQLDFDLDLAKKQSSDNPVYYLQYAHARISSLLREWEGRGGDVAALRRDGTPLPDL 482

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              +     L   LA +P  +  A+    P+ +  Y  +LA  FH  ++  R       +
Sbjct: 483 LFDNREARALAETLATFPVEMAGASADLAPHVVTAYALNLAGAFHSFYNTNR-------I 535

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + ++   RL+L  AV  ++ + L ++GV +P  M
Sbjct: 536 LGESTEVERGRLRLAEAVRIVLATCLGLLGVSAPERM 572


>gi|109895009|sp|Q2Y676|SYR_NITMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 581

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 203/608 (33%), Positives = 312/608 (51%), Gaps = 62/608 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S   + L+    +  +    LD I   RPR  +HG  S N AM L++PL   P  IA
Sbjct: 8   DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +       P ++ V IAG GFINL+L+ S  ++    ++ SG ++G + +G G K+ +
Sbjct: 67  QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA+++A +GY VTREYYINDAG Q++ LALS + RY
Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-------------EKWLP- 231
            + L    S  P   Y G Y++ + + +   ++   ++ PE             E  L  
Sbjct: 187 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 245

Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                          + ++ +   +   R+DL    +  DI+ SE      D   +   +
Sbjct: 246 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 303

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L    Y+Y+                      FRS+  GD+ DR + + +G +TYFA+D
Sbjct: 304 HLLEEGNYLYQ----------------QDGAKWFRSSHFGDEKDRVVQRENGQFTYFASD 347

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K+ RGFD +I + G+DH GY+ R++    A++    ++ + L +   LYRDG  
Sbjct: 348 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 407

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           + MS RAG+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+YVQYA
Sbjct: 408 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 467

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+  Q  +       D          +    +EL L+  L +YP  +E A     
Sbjct: 468 HARVCSVLEQWGE-------DPGMLVTADTSALTGAAELSLLQKLIDYPETVEAAAREFS 520

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ +AFYL +LA  FH +++  R              + + RL LV AV  ++N+GL ++
Sbjct: 521 PHLIAFYLKELAGEFHSYYNSTRF-------LVPEMTVRLARLALVAAVRQVLNNGLKLL 573

Query: 578 GVESPNEM 585
           GV +P +M
Sbjct: 574 GVSAPAKM 581


>gi|325002812|ref|ZP_08123924.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 550

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 191/580 (32%), Positives = 287/580 (49%), Gaps = 37/580 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            +  +++  +++  +  ++   L     +ERPR+  HG  +TN A+  ++  G++P  +A
Sbjct: 7   LADLVRDVARDVLARRDLDVSALPADAGVERPRNPEHGDYATNIALRTAKKAGVNPRELA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   +     V    IAG GFINL L+      I+  ++  G  YG      GT++N+
Sbjct: 67  TWLAEELATRDGVAGAEIAGPGFINLRLAADAQGAIVGEVLAQGERYGTGDELAGTRMNL 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+G  R A VGD L  ++   G +VTREYYINDAGAQI+  A S+    
Sbjct: 127 EFVSANPTGPIHLGGTRWAAVGDALGRVLVARGADVTREYYINDAGAQIDHFAASLIAAA 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                   +  PE  Y G Y+  + + +       +L  PE +     +   V  M++ +
Sbjct: 187 ------TGAPTPENGYGGAYIGEIAERVVAAE-PGILELPEAERHQAFRRTGVALMLEEM 239

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R  L       D++ SE   H  +   + D +  L   G +YE                 
Sbjct: 240 RRSLHEFGTDFDVWFSELSLH--ESGAVEDSVRQLKDDGSLYE----------------K 281

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
                 RST  GDD DR ++KSDG+  Y A D+AY + K  RGFD  +Y++G+DH GY  
Sbjct: 282 DGAWWLRSTEQGDDKDRVVIKSDGTPAYVAGDIAYLRDKRGRGFDRCLYMLGADHHGYTV 341

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           RL+AVAAA  +  + + VL+ ++V L R G P++MSKRAG  +TL   VD VG D+ R+ 
Sbjct: 342 RLKAVAAAFGDDPSVVEVLIGQMVNLIRAGEPVRMSKRAGTIVTLEDFVDAVGVDAARYS 401

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ++       LD D   V  ++ ENPVFYVQYA+AR  S+ R A D+  +           
Sbjct: 402 LVRSSVDSTLDIDLDLVSSRTSENPVFYVQYAHARLSSLARNAADLGVEPGDGYG----- 456

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    E  LI  L E+P V+  A   +EP+++A YL  LA  +H  +   R  P+ 
Sbjct: 457 ---LLVHDREGDLIRTLGEFPDVVRTAAELREPHRVARYLESLAGAYHKFYDSCRVLPQG 513

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    L   RL L  A   ++ +GL ++GV +P  M
Sbjct: 514 ---DEEISDLHRARLSLCGAARRVLANGLGLLGVGAPERM 550


>gi|254283249|ref|ZP_04958217.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219679452|gb|EED35801.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 561

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 181/586 (30%), Positives = 291/586 (49%), Gaps = 36/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S L+  L+ +     +    +    IE P+D +HG  +TN AM+L++  G+ P   A+
Sbjct: 5   LTSLLEQALQSLVAAGTLSDGEVVSPKIEHPKDPSHGDFATNLAMVLAKRAGMPPREFAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +  +  ++   IAG GFIN  LS +    ++  I+  G EYG     +  KV +E
Sbjct: 65  RLIDALPDNSLIEGTEIAGPGFINFRLSQASNTGVIREILTQGAEYGYQRHTRRGKVQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD+L+ L+  +G++V RE+Y NDAG QI+ LALSV  R  
Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDSLSRLLTATGWDVHREFYYNDAGQQISNLALSVQAR-A 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAM 241
           + L   +++ P+  Y G Y+  +      K +      E+    +   L  ++ ++V  +
Sbjct: 184 KGLTPENANWPDDGYRGEYIADLADAFLKKEAVAAADREVAANGDSDDLDNIRAFAVAWL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +    DLKA  +Q D +  E   + G    +  +++ L   G+ YE             
Sbjct: 244 RREQDADLKAFGVQFDEYFLESSLYDG--GEVDRVVEELTINGHTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  RST  GDD DR + K +G YTYF  D+AY + K+ RG+  +I   G+DH 
Sbjct: 289 ---QDGALWLRSTEFGDDKDRVMRKREGGYTYFVPDVAYHRNKWRRGYQRVINEQGADHH 345

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A    +           +L ++V + RDG  +K+SKRAG ++TL  ++D VG 
Sbjct: 346 STITRVRAGLQGLDAGIPDGWPEYVLHQMVTVMRDGAEVKLSKRAGSYVTLSDLIDWVGR 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF +  R  +  L FD    + QS ENPV+Y+QYA+AR  S+ R+A+   PD     
Sbjct: 406 DATRFFLTARAATSQLTFDIDLARSQSNENPVYYIQYAHARVCSVERKARQQDPDW---T 462

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               +   ++  +   L L + L+ +P V+  A    EP+ +A YL  +A  FH  ++  
Sbjct: 463 PTDGLESLDTLIEPEALALALTLSRFPEVVSTAAERLEPHDIANYLRGVAGEFHSFYNAH 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V      L             +I +GL ++GV +P  M
Sbjct: 523 KMLDAEPPVARARLALADA-------TRQVIANGLALLGVSAPESM 561


>gi|224475751|ref|YP_002633357.1| arginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782982|sp|B9DKQ7|SYR_STACT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222420358|emb|CAL27172.1| putative arginyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 554

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 199/588 (33%), Positives = 315/588 (53%), Gaps = 37/588 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +        + +++   + +E P+D  +G  STN AM+L++    +
Sbjct: 1   MNIIDQVKQTLIEEITASVKAAGLAEEV-PEVKVEIPKDPKNGDYSTNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +     +V+ + IAG GFIN YL+  YL  ++   +    ++GRN   K
Sbjct: 60  PHEIAQAIVDHLDKSKANVEKIEIAGPGFINFYLNNQYLTAVIPEALEKDKDFGRNEDPK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV +E+VSANPTG +H+GH R A VGDTL++++  +GY+VTREYYINDAG QI  LA 
Sbjct: 120 HQKVLVEYVSANPTGDLHIGHARNAAVGDTLSNILDAAGYDVTREYYINDAGNQITNLAH 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY QA+   +++LP   Y G  + ++GK+LA+K   EL + PE++ L + +   V 
Sbjct: 180 SIEARYDQAM-GKETELPADGYYGKDIINIGKDLAEK-RPELKDLPEDERLKVFRQLGVD 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             M+ ++ DL   N   D + SE   +  D   I+ +++ +   GY YE           
Sbjct: 238 YEMEKLKKDLADFNTHFDGWFSETTLY--DKGEIKKVLELMKENGYTYEA---------- 285

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVMG 357
                       R+T   DD DR ++K DGSYTYF  D+AY   K+ R  G D +I + G
Sbjct: 286 ------DGATWLRTTDFNDDKDRVIIKKDGSYTYFLPDVAYHYDKFHRDGGQDILINLFG 339

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ RL+A          ++ + + ++VRL +DG  +KMSKR G+ ITLR ++DEV
Sbjct: 340 ADHHGYINRLKASVETYGIDADRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLREIMDEV 399

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ +  R      DFD    KE S ENPV+Y QYA+AR  SI +QA +       
Sbjct: 400 GIDAARYFLTMRSPDTHFDFDMELAKENSAENPVYYAQYAHARISSILKQAGERG----- 454

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            + P          +   + L+  +AE+  +IE+A   + P+++  Y+ +LAS FH  ++
Sbjct: 455 -ITPSENADFSVITNDKAIDLLKKVAEFEPMIESAAEHRAPHRVTNYIQELASAFHKFYN 513

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +       V  ++ K T   + ++ AV   + + L ++GV +P+ M
Sbjct: 514 ADK-------VLTDDEKKTQAYVSMIAAVQITLRNALALVGVSAPHNM 554


>gi|54294929|ref|YP_127344.1| arginyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81368288|sp|Q5WV09|SYR_LEGPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53754761|emb|CAH16248.1| arginine tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 589

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 207/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     LK  L  +    ++   +   I +E  +D AHG  +TN A++L++P    P 
Sbjct: 4   MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 63

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE +VA I  DP V+ + IAG GFIN ++  +    I+S I+  G E+G+  +G+  K
Sbjct: 64  VLAERLVAVIPADPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGQGNLGQSQK 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IEFVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA+SV+
Sbjct: 124 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 183

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228
            RY + L       P   Y G Y+  + +E+  +  ++ +        N P ++      
Sbjct: 184 LRYLE-LAGEPIAFPANGYKGQYVYEIAQEMWSEQGNQFVHPWISVVDNLPADEPEGGDK 242

Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                                    ++++ ++  I+DDL+A  ++ D + SE      + 
Sbjct: 243 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 300

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I   I  L  +G+ YE                    L FR+T  GD+ DR L++++G 
Sbjct: 301 GSIGKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 344

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   KY+RGFD +I + G+DH GYV R++    A+   ++ ++V+L +   
Sbjct: 345 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 404

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR G  ++MS R+G F+TLR + +EVG+D+ R+  + RK  + +DFD    K +S +NP
Sbjct: 405 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+ RQ K+     D D+  +N+   E +    E  LI  +A YP VI+
Sbjct: 465 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HEATLISLIARYPEVIQ 521

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  + EP++LA+YL +LA+  H +++  +       +     +L   RL L+ +V  ++
Sbjct: 522 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 574

Query: 571 NSGLNIIGVESPNEM 585
           N+GL I+GV +P  M
Sbjct: 575 NNGLAILGVSAPESM 589


>gi|212219516|ref|YP_002306303.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238065085|sp|B6J667|SYR_COXB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212013778|gb|ACJ21158.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 592

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 7   MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 66

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +
Sbjct: 67  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +            PEE       
Sbjct: 187 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            K    V   ++ +++  I++DL+  ++ +D +  E    R   
Sbjct: 246 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--E 303

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                      FR+T +GD+ DR L + +G 
Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGL 347

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNHEKELLATLGRYPEVIK 524

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 578 RNGLTLLGVSAPEEM 592


>gi|190572467|ref|YP_001970312.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558810|sp|B2FJW0|SYR_STRMK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190010389|emb|CAQ43997.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 562

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 188/587 (32%), Positives = 301/587 (51%), Gaps = 37/587 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P  +A
Sbjct: 5   LRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDFATNAAMLLAKAARSNPRALA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +V  +    DV  V IAG GFIN +L+P+  ++  +S++    +YGRNL G G  V +
Sbjct: 65  QALVEALPRSEDVSKVEIAGPGFINFHLAPAAYQREAASVIKEAHDYGRNLSGNGRTVGV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+HVGH R A +GD +A ++  +G+   RE+Y NDAG QI  LALS   R 
Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNAKREFYYNDAGVQIENLALSTQARI 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    + D   PEG Y G Y+  V +        D   S ++   +   +  ++ ++V  
Sbjct: 185 KGIAPDQDG-WPEGGYRGEYIADVARAYMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAY 243

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +      DL A  +  DI+  E   +      + + +  L   G+ YE            
Sbjct: 244 LRNEQNLDLAAFGVDFDIYFLESSLYA--DGKVAEAVAKLQASGHTYE------------ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               +   L  RST  GDD DR + KSDG++TYF  D+AY   K++RG++  I  +G+DH
Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGYERAITELGADH 345

Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
            G + R+ A   A+     +     +L ++V + R G  +K+SKRAG + TLR +++E G
Sbjct: 346 HGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAG 405

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ ++ RK    L FD    ++QS +NPVFYVQYA+AR  S+ RQA++     +  
Sbjct: 406 RDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKGLVYEQG 465

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                +       D + L L+  ++ YP V+E A +A EP+ +A YL +LA  FH  +  
Sbjct: 466 ---NGLANLGRLADDASLLLMNEISRYPEVVEAAGVALEPHLVAQYLRELAHAFHTWYHG 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    V   +      +L L  A   ++ +GL ++GV +P +M
Sbjct: 523 T-------PVLVEDAADRNAKLTLACAARQVLANGLELLGVSAPEKM 562


>gi|258405440|ref|YP_003198182.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797667|gb|ACV68604.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 551

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 191/579 (32%), Positives = 312/579 (53%), Gaps = 32/579 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           S+ + + L+ +      +     +  ++ P+D   G +++N AM+L++  G  P  +A  
Sbjct: 4   STYITSVLQTVVADRGWQ--WPAKASLDTPKDPNFGDVASNLAMVLAKQAGQKPRDLAAS 61

Query: 68  IVAR-IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +    ++    +  + IAG GF+N++  P++ ++ +S I  +G  YG++ +G+G  V +E
Sbjct: 62  LREEVLQRGAAIQDIEIAGPGFLNVFFKPAFWQQTVSVIQEAGQSYGQSDMGQGKTVQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A VGD+LA ++  +G+ VT EYY+NDAG Q+  L  S+ +R  
Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLARILRRTGHTVTTEYYLNDAGRQMQILGASIAYRVL 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L   D+  PE +Y G Y++ + +EL D   + L      + L   + + +  +++ I+
Sbjct: 182 ELLGGPDT-FPEDHYQGGYIRDLAQELVDTRGASLSAMDWPELLEHCRQHGLTRILEGIK 240

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL+   ++H ++ SE      D   +   + +LA +G  YE                  
Sbjct: 241 RDLRDFRVEHQVWFSEQSL--LDKGRVEATLTDLANRGLAYE----------------QD 282

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F ST  GDD DR L KSDG  TYFA+D+AY   KY RGFD ++ + G+DH GYV R
Sbjct: 283 GALWFASTTFGDDKDRVLRKSDGDLTYFASDIAYHADKYARGFDTVVDIWGADHHGYVPR 342

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++    A+      + V+L +LV L RDG  + MS RAG F TL  V  EVG D+ RF+ 
Sbjct: 343 MKGAVQALGRASEDLQVILVQLVNLLRDGEQVSMSTRAGKFETLADVCAEVGPDAARFIF 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK QS +NPV+YVQYA+AR  S+ R+  +      F+  P +   
Sbjct: 403 LSRKSDSHLDFDLELVKRQSMDNPVYYVQYAHARINSVLRKGAERG----FEPRPVSEAD 458

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   ++ L   L  +P V++ A     P+ ++FYL +LA + H +++         
Sbjct: 459 LALLDTAEDMDLFKKLDRFPEVVQGAARTLSPHHVSFYLQELAGLLHRYYNTH------S 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A +  L   R  L+ AV  ++++GL ++GV +P +M
Sbjct: 513 VLYAESDALLQARFHLLLAVRQVLHNGLELLGVHAPEQM 551


>gi|254774331|ref|ZP_05215847.1| arginyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 550

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 190/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+N    +  +  ++   L   +V+ERPR+  HG  ++N A+ L + +G +P  
Sbjct: 4   ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  + A +     + S  +AG GFINL L  S    ++++++ +G  YG +       +
Sbjct: 64  LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  +     L+ PE +     +   V  M  
Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVLRQAPDA-LSLPEPQLRETFRAIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D++  ED  H      +   I  L   G +YE               
Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y A D+AY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA  +  A + VL+ ++V L RDG P++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLKAVAAAFGDDPAAVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D +       S ENPV+YVQYA+AR  ++ R A ++           +
Sbjct: 399 YSLIRSSVDTPIDIELALWSSASNENPVYYVQYAHARLSALARNAAELG-------LIPD 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  L E+PRV++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 452 TAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550


>gi|164685833|ref|ZP_01945807.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|164601349|gb|EAX33686.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
          Length = 586

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 1   MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +
Sbjct: 61  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 121 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +            PEE       
Sbjct: 181 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 239

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            K    V   ++ +++  I++DL+  ++ +D +  E    R   
Sbjct: 240 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--E 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                      FR+T +GD+ DR L + +G 
Sbjct: 298 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGL 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 342 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 402 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 462 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNHEKELLATLGRYPEVIK 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 519 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 571

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 572 RNGLTLLGVSAPEEM 586


>gi|297545501|ref|YP_003677803.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843276|gb|ADH61792.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 561

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 201/590 (34%), Positives = 325/590 (55%), Gaps = 37/590 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +       +K+     +K    +  +  + +  I IE P++  HG L+ N AMI+++  
Sbjct: 3   NIIQKVKDEIKDMVTTAIKNSVKEGLINIESIPEIEIEEPKEKQHGDLAINTAMIMAKQA 62

Query: 58  GLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + +AG GFIN +L+  +L + L  +   G +YGR  
Sbjct: 63  KMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEETLKLVYKRGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IGKG KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E+    + +Y
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDAPSEERRKALVEY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL+   I++D++ SE   +  D   +  +I+ L ++GY YE        
Sbjct: 242 GLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++++G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++  ++    A+     +++V+L +LV+L   G  +KMSKR G  +TLR ++D
Sbjct: 344 WGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++     
Sbjct: 404 EVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEKVKIE 463

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + D    +++ +E      E  LI  LA +P  I  A     P+++  Y+ D+AS+FH  
Sbjct: 464 NIDEVDLSLLKEE-----EEKDLIKKLAYFPEEITIAARTLTPHRITRYVLDVASLFHSF 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V+     L   R  L+ AV ++I + L+I+ + +P  M
Sbjct: 519 YNSHR-------VKGVEENLMKARFVLILAVKTVIKNALDILKITAPERM 561


>gi|289523473|ref|ZP_06440327.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503165|gb|EFD24329.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 558

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 205/565 (36%), Positives = 315/565 (55%), Gaps = 34/565 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILD----RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           D  S +K+ L +       ++ ++      I+IERPR    G  +TN AM+++R   + P
Sbjct: 3   DVESHIKDLLNDAIISTAKDENLVYPEGLEIIIERPRRENQGDYATNVAMLMARNWEMKP 62

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA++I++ +K    V+ V +AG GFIN +LS  ++ +++  I+  G +YG+  +G+G 
Sbjct: 63  RDIAQVIISHLKKSEYVEKVEVAGPGFINFFLSDLWMSELIREIIDKGEDYGKRDLGEGK 122

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +  +EFVSANPTGP+H+GH R A VGD +A++++F+G+ V REYYINDAG Q+  L  SV
Sbjct: 123 RAQVEFVSANPTGPLHIGHGRGAAVGDVMANILSFAGWYVEREYYINDAGLQMKLLGRSV 182

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             RY + L  +++   PE  Y G Y+  + +E+ D    + L  P E+ L   KDY+V+ 
Sbjct: 183 QARYFELLGRSEAAPFPEDGYKGDYIHEIAQEIIDIEGDKFLGLPIEETLDYFKDYAVKV 242

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++  I+ DL+   +  D++ SE   H  +   IR+++D L ++G  YE            
Sbjct: 243 ILNGIKKDLEDFRVLFDVWFSEKTLH--ERGLIREMVDFLMKRGLAYE------------ 288

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   + +RST  GD+ DR L++S+G  TYFA+D+AY K K++RGFD +I V G+DH
Sbjct: 289 ----KEGAIWYRSTKFGDEKDRVLIRSNGEPTYFASDVAYHKDKFDRGFDLVIDVWGADH 344

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYV R++A   A+      + VLL + V L + G  + MS RAG+F+TLR ++DEVG D
Sbjct: 345 HGYVPRMKAAVQALGRSPDDLQVLLIQFVSLIKQGRMVSMSTRAGEFVTLREMMDEVGVD 404

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++R+  L RK    LDFD    K  S +NPV+YVQYA AR  SIF++A         +L 
Sbjct: 405 AMRYFFLMRKCDSHLDFDIDLAKSASTDNPVYYVQYASARLHSIFKEASSRG----IELP 460

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               +         E  LI  L ++P  +  A     P+ + FY Y+LA  FH  ++  R
Sbjct: 461 APEKVDISLLKTEEEKALIKCLGKFPEEVAKAAKELSPHLIVFYAYELAKAFHSFYNAHR 520

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHA 565
                  V    + L+  RL LV A
Sbjct: 521 -------VLGEEKSLSDARLILVRA 538


>gi|322382230|ref|ZP_08056143.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153811|gb|EFX46179.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 555

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 206/585 (35%), Positives = 319/585 (54%), Gaps = 32/585 (5%)

Query: 3   LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +  +  + +K  +   +     V+ + L  + +E P+D AHG  +TN AM L+R    +P
Sbjct: 1   MLNEVKTSVKKAIADAVVSAGIVDIEQLPAVTLEVPKDKAHGDFATNIAMQLTRIAKQNP 60

Query: 62  LTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IAE ++A +  +    D V IAG GFIN  ++ SYL +++  ++  G  YG+  +GKG
Sbjct: 61  RQIAEKLIAHLDKEAAYIDEVEIAGPGFINFRMNKSYLYQVIGQVLEQGNSYGKINMGKG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +EFVSANPTG +H+GH R A VGD L +++  +G EVTREYYINDAG Q+  LA S
Sbjct: 121 KRVQVEFVSANPTGSLHLGHARGAAVGDALCNVLEMAGCEVTREYYINDAGNQVLNLAKS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  RY+QAL   ++++PE  Y G  +K   +ELA      LL   +E+ L   + Y ++ 
Sbjct: 181 IEARYRQAL-GQEAEMPEDGYYGEDIKGFAEELAKAEGDRLLALNDEERLVFFRKYGLEK 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  I+ DL    ++ D + SE   +  +   I D++  L   G+V+E            
Sbjct: 240 ELDKIKRDLGRFGVKFDEWFSETSIYENNM--IDDVLKQLKDNGHVFE------------ 285

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                      R+T  GDD DR L+K+DG+YTY   D+AY + KYERG+D +I + G+DH
Sbjct: 286 ----QDGATWLRTTDYGDDKDRVLIKNDGTYTYLTPDVAYHRNKYERGYDEIINIWGADH 341

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T+  ++DEVG D
Sbjct: 342 HGYIPRMKAAVTALGYDANKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVD 401

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++R+    R     LDFD      +S ENPVFYVQYA+AR  SIFRQA++        + 
Sbjct: 402 AIRYFFTMRSMDSHLDFDMDLAISKSNENPVFYVQYAHARICSIFRQAEEQG----ISML 457

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P            +E  L+  +AE P  +  A     P++L  Y+Y+LAS FH ++   R
Sbjct: 458 PAGQADLSRLTAEAEFDLLRKMAELPEEVAIAAEQYAPHRLIRYVYELASQFHSYYKAER 517

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V  ++   T  RL L+ A+  ++ + L  +GV  P  M
Sbjct: 518 -------VITDDAAQTQARLALLAALRVVLRNVLAAVGVSVPERM 555


>gi|119505532|ref|ZP_01627604.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458641|gb|EAW39744.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 564

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 190/592 (32%), Positives = 309/592 (52%), Gaps = 35/592 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +S L   +  +  K +V +       ++  +D +HG L+TN AM+LS+  G  
Sbjct: 1   MIMKEALTSLLVQAVSTLIAKGQVPEVPDLVPQVDHTKDASHGDLATNLAMVLSKKAGKA 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I+  +  +  +    IAG GFIN +L+ +   +++ SI+ SG ++G +  G G
Sbjct: 61  PRDLAAAIIEALPTNDLISKTEIAGPGFINFFLNQASNVEVIRSILNSGPKFGTSDKGAG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  +EFVSANPTGP+HVGH R A +GD+L+ L+  +G+ V RE+Y NDAG QI  LA S
Sbjct: 121 RRAQVEFVSANPTGPLHVGHGRGAAIGDSLSRLLEATGWSVHREFYYNDAGQQIANLARS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKD 235
           V  R  Q L   D D PE  Y G Y+  +     +K         +    +   L  ++D
Sbjct: 181 VQAR-AQGLTPEDPDWPEDGYRGTYIVDLATAYQNKITVSAADRTITALGDVDNLAAIRD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DLKA  +Q D +  E   +  +   + D +  L R G+ YE       
Sbjct: 240 FAVAWLRREQDLDLKAFGVQFDEYFLESALY--ESGEVTDTVTALERAGHTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                    +   L  R++  GDD DR + K  G YTYF  D+AY   K++RGF+ +I  
Sbjct: 291 ---------EGGALWLRTSDFGDDKDRVMRKKGGEYTYFVPDVAYHFNKWQRGFERVINE 341

Query: 356 MGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G+DH   + R+ A    +++   +     +L ++V + RDG  +K+SKRAG ++TLR +
Sbjct: 342 QGADHHSTITRVRAGLQGLAKDIPEGWPEYVLHQMVTVMRDGTEVKLSKRAGSYVTLRDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++ VG D+ RF +  R  S  L FD      QS ENPVFY+QYA+AR  S+ R+A     
Sbjct: 402 IEWVGKDATRFFLAARSASSQLTFDIDLALAQSNENPVFYIQYAHARVCSVKRKALSEGS 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D         +   ++   + EL L + LA++P ++ +A    EP+ +A YL ++A+ FH
Sbjct: 462 DW---TPQAGLDHLDTLTSSEELALALLLAKFPEIVASAAQRLEPHDIANYLREVAAAFH 518

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++        + +  +N+  ++ R+ L  A   +I +GL+++GV +P  M
Sbjct: 519 GLYNAH------KLIDEDNKNQSLGRISLAEATRQVIANGLDLLGVSAPESM 564


>gi|303230487|ref|ZP_07317246.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514853|gb|EFL56836.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 577

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 198/607 (32%), Positives = 308/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L+E      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MDMKEILKSGIEQALQETINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +  D  ++   +AG GFIN +L    +   L +I+ +G +YG   +   
Sbjct: 61  PRAIAETLISHMDFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYSS 219
           + +R+Q+            N D               PE  Y G  +    K +A++  S
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGS 239

Query: 220 ELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           + LN   E   + + K+  ++  +  + + L    +  D + SE   H  +   I   ++
Sbjct: 240 DTLNAMNEADRVALFKEEGLKEKLARLEETLSNFRVTFDNWFSERTVH--EADEIHHSVE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + KY+RGF  MI + G+DH GYV R++A  AA      ++ VLL ++V L+RDG  +
Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  +++EVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q ++            +     +     EL+LI  LAEYP  +  +   + P
Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHRAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YL+DLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLFDLASMFHSFYRQGR-------IIGVDPSLQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|313202467|ref|YP_004041125.1| arginyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441783|gb|ADQ85889.1| arginyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 552

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 189/586 (32%), Positives = 295/586 (50%), Gaps = 41/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L +    + V+   L  I +ERP+   HG  +TN AM+L++PL  +P  IAE
Sbjct: 1   MKAHLTELLTQAAKSLGVDSASLS-IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAE 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V  V IAG GFIN +L+      +++ I   G  +G N  G+  KV +E
Sbjct: 60  SLIQALPASEYVAKVEIAGAGFINFFLNGQARHGVIAQIREQGERFGHNNAGQQRKVQVE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD LA L+A +G++VTRE+Y NDAGAQI+ L  SV  R  
Sbjct: 120 FVSANPTGPLHVGHGRGAAVGDCLARLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-A 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           Q L       PE  Y G Y+  + K     E       ++    +   L  ++ ++V  +
Sbjct: 179 QGLTPEHPTFPEEGYRGEYIIDIAKAYLAGETVVADDQQVTASGDVNDLESIRRFAVAYL 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DL+A  I+ D+F  E   +      +   +  L   G+ YE             
Sbjct: 239 RHEQDLDLQAFQIKFDVFSLESSLYT--EGKVESTVQALINSGHTYE------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++T  GDD DR + K +G YTYF  D+AY   K++RGF+ +I   G+DH 
Sbjct: 284 ---QDDALWLKTTDFGDDKDRVMRKREGGYTYFVPDVAYHVEKWKRGFERVINEQGADHH 340

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A   A+     +   + +L ++V + R G  +K+SKRAG ++TLR +++EVG 
Sbjct: 341 STITRVRAGLQALDIGIPQGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R+    L FD    + Q+ +NPV+Y+QYA+AR  S+  Q       L    
Sbjct: 401 DATRYFLAARRADSQLVFDIDLARAQTNDNPVYYIQYAHARICSVLGQWGGDESSLVGAD 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R   P        E  L+  L E+  V++NA     P+ +A YL +LAS  H +++  
Sbjct: 461 LSRLDAPH-------EAALLQRLDEFSDVVKNAADELAPHMVANYLKELASDLHSYYNAQ 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           +  L + R+ L+ A   ++ +GL+++GV +P +M
Sbjct: 514 QF-------LVEDSALKLARMALISATRQVLKNGLDLLGVSAPEKM 552


>gi|209364278|ref|YP_001425414.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|254783049|sp|A9KH27|SYR_COXBN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|207082211|gb|ABS77583.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 592

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 7   MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMRPH 66

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +
Sbjct: 67  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +            PEE       
Sbjct: 187 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            K    V   ++ +++  I++DL+   + +D +  E    R   
Sbjct: 246 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 303

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                      FR+T +GD+ DR L++ +G 
Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 347

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 524

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 578 RNGLTLLGVSAPEEM 592


>gi|304315735|ref|YP_003850880.1| arginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777237|gb|ADL67796.1| arginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 562

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 200/583 (34%), Positives = 320/583 (54%), Gaps = 32/583 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           ++ +  + N +++      +  + +  I IE P++   G LS N AM++++   + P  I
Sbjct: 10  SEITEIVTNSIEKAIKSGLLNIEDMPSIEIEEPKEKQFGDLSINTAMVMAKSAKMPPRKI 69

Query: 65  AELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE+I   +K+    +D V IAG GF+N YLS  Y  + L  I   G +YGR  IG G KV
Sbjct: 70  AEIIKDGLKLKGTLIDKVEIAGPGFMNFYLSEDYKVEALKLIKRKGSDYGRVNIGNGKKV 129

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGPMH+G+ R   +GD L+S++ ++GY+VTRE+YINDAG QI    LS+  
Sbjct: 130 QVEFVSANPTGPMHMGNARGGALGDALSSILDYAGYDVTREFYINDAGNQIEKFGLSLEA 189

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY + L    +++PEG Y G  +    KE  + Y  +  +   E     +  Y ++  ++
Sbjct: 190 RYLELL-GEHAEVPEGGYHGDDIIERAKEFLELYGDKYKDAAPEDRRKALVQYGLKKNIE 248

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +++DL+A  I++D++ SE+  H  +   +  +ID L  +GY YE               
Sbjct: 249 KLKEDLEAYGIEYDVWFSENTLH--ESGEVESVIDELKEKGYTYE--------------- 291

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
                L F+ T+ G + D  L++++G  TY A+D+AY K K+ +RGFD +I + G+DH G
Sbjct: 292 -KDGALWFKETLFGAEKDDVLVRANGYPTYLASDIAYHKNKFVKRGFDWVIDIWGADHHG 350

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V  ++    A+     +++VLL +LVRL +    +KMSKR G  +TLR ++DEVG D+ 
Sbjct: 351 HVAPMKGAMKALGIDPDKLDVLLMQLVRLMKGKEVVKMSKRTGKMVTLRDLIDEVGKDAA 410

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF    R     +DFD     EQS ENPVFYVQYA+AR  SI RQ KD   + D      
Sbjct: 411 RFFFNMRSADSAVDFDMDLAVEQSNENPVFYVQYAHARICSIIRQLKDDGINTD----DL 466

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             +      + +E+ LI  LA  P  +  A     P+++  Y+ D+AS+FH  ++  R  
Sbjct: 467 KDVDLNLLNEEAEIDLIKKLAYLPEEVTIAAKTMAPHRITRYILDVASLFHTFYNSCR-- 524

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                V+  + +L   R+ L+ +   +I + L+++ + +P +M
Sbjct: 525 -----VRGVDEELMKARIVLIDSTRIVIKNVLDMLKITAPEKM 562


>gi|254000508|ref|YP_003052571.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253987187|gb|ACT52044.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 552

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 189/586 (32%), Positives = 295/586 (50%), Gaps = 41/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L +    + V+   L  I +ERP+   HG  +TN AM+L++PL  +P  IAE
Sbjct: 1   MKAHLTELLTQAAKSLGVDSASLS-IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAE 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V  V IAG GFIN +L+      +++ I   G  +G N  G+  KV +E
Sbjct: 60  SLIQALPASEYVAKVEIAGAGFINFFLNGQARHGVIAQIREQGDRFGHNNAGQQRKVQVE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A VGD LA L+A +G++VTRE+Y NDAGAQI+ L  SV  R  
Sbjct: 120 FVSANPTGPLHVGHGRGAAVGDCLARLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-A 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           Q L       PE  Y G Y+  + K     E       ++    +   L  ++ ++V  +
Sbjct: 179 QGLTPEHPTFPEEGYRGEYIIDIAKAYLAGETVVADDQQVTASGDVNDLESIRRFAVAYL 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DL+A  I+ D+F  E   +      +   +  L   G+ YE             
Sbjct: 239 RHEQDLDLQAFQIKFDVFSLESSLYT--EGKVESTVQALINSGHTYE------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++T  GDD DR + K +G YTYF  D+AY   K++RGF+ +I   G+DH 
Sbjct: 284 ---QDDALWLKTTDFGDDKDRVMRKREGGYTYFVPDVAYHVEKWKRGFERVINEQGADHH 340

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A   A+     +   + +L ++V + R G  +K+SKRAG ++TLR +++EVG 
Sbjct: 341 STITRVRAGLQALDIGIPQGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +  R+    L FD    + Q+ +NPV+Y+QYA+AR  S+  Q       L    
Sbjct: 401 DATRYFLAARRADSQLVFDIDLARAQTNDNPVYYIQYAHARICSVLGQWGGDESSLVGAD 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R   P        E  L+  L E+  V++NA     P+ +A YL +LAS  H +++  
Sbjct: 461 LSRLDAPH-------EAALLQRLDEFSDVVKNAADELAPHMVANYLKELASDLHSYYNAQ 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           +  L + R+ L+ A   ++ +GL+++GV +P +M
Sbjct: 514 QF-------LVEDSALKLARMALISATRQVLKNGLDLLGVSAPEKM 552


>gi|257092605|ref|YP_003166246.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045129|gb|ACV34317.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 590

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 205/622 (32%), Positives = 305/622 (49%), Gaps = 77/622 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S L + ++     +    +    I IERP+  AHG  S N AM L+R L  +P  +A
Sbjct: 4   DLKSHLADLMRVALHSVA-PAEADTTIHIERPKQAAHGDFSCNLAMQLARSLKRNPRQLA 62

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           EL+++ +   P V    IAG GFIN +L P+   +++  ++    ++GR+  G   KV +
Sbjct: 63  ELLLSELPPSPWVSKAEIAGAGFINFHLPPTAKIQVVRDVLEQAEDFGRSTSGGRRKVLV 122

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +L  L+AF+G++VT EYY+NDAG Q++ LALS + RY
Sbjct: 123 EFVSANPTGPLHVGHGRGAAYGGSLCKLLAFAGWDVTSEYYVNDAGRQMDILALSTWLRY 182

Query: 186 QQALYNNDSD--LPEGYYPGVYLKHVGKELADKYSSEL---------------------- 221
            +      +    P   Y G Y++ +  +L   +                          
Sbjct: 183 LELCSGEGTPSLFPPNAYQGDYVRAMASQLLTAHGERYRRTASDVLAGTPGLPGAERTDA 242

Query: 222 -----------------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                             +   E+W   V D+ +   +   R DL+   +  D++ SE  
Sbjct: 243 EAAQQREAQLDALIVNAKHLLGEEWQY-VHDFVLTEQLADCRGDLEESGVHFDVWFSEQS 301

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                   +   ++ L + G++Y                +      FRST  GD+ DR +
Sbjct: 302 LFA--TGMVARCVERLEKGGHLY----------------VQDGARWFRSTTFGDEKDRVI 343

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            + +G YTYFA+D+AY   KYERGF  +I V G+DH GY+ R++   +A+      + V 
Sbjct: 344 QRDNGFYTYFASDIAYHLNKYERGFQRIINVWGADHHGYIPRVKGAVSALGLDPEVLEVA 403

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L +   LYR G    MS R+GDF+TLR +  EVG+D+ RF  + RK+ + LDFD    K 
Sbjct: 404 LVQFAVLYRSGCKASMSTRSGDFVTLRTLRAEVGNDACRFFYVLRKSDQHLDFDLDLAKS 463

Query: 445 QSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           QS +NPVFYVQYA+AR RS+    A +       DL P             EL L   L 
Sbjct: 464 QSNDNPVFYVQYAHARVRSLLALWAGEPQVLAGADLDPLG--------SARELALAARLG 515

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+P V+E A     P+ +AFYL DLA+ FH H++  R       +  ++  +   R+ L 
Sbjct: 516 EFPEVVEAAAGELAPHLIAFYLRDLAAEFHSHYNAER-------ILVDDPAIRDARIALA 568

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  +I +G+ I+GV  P  M
Sbjct: 569 AAVGQVIRNGMAILGVSCPESM 590


>gi|165918171|ref|ZP_02218257.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165918031|gb|EDR36635.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 586

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 209/615 (33%), Positives = 322/615 (52%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + L   ++ +  K  ++ ++   I I    D  HG  +TN A+ LS+  G+ P 
Sbjct: 1   MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV  +     +  V IAG GFIN +++    + ++SSI+ +G +YGR+ +GKG +
Sbjct: 61  ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++E+VSANPTGP+HVGH R A  G  +A+L+  +G+EV REYY+NDAG Q+  LALSV+
Sbjct: 121 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227
            RY Q  Y    +LP+  Y G Y+  + + L  KY  +            PEE       
Sbjct: 181 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 239

Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                            K    V   ++ +++  I++DL+  ++ +D +  E    R   
Sbjct: 240 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--E 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I++ +D L + GYVYE                  +   FR+T +GD+ DR L + +G 
Sbjct: 298 GLIQEGLDLLTKHGYVYE----------------KNRAQWFRATALGDEKDRVLFRKNGL 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFAAD+AY   K+ +G+D +I + G+DH GY+ R+      + +   ++++LL +   
Sbjct: 342 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    + MS R G F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS ENP
Sbjct: 402 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ K    + D    PR +          E +L+  L  YP VI+
Sbjct: 462 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNHEKELLATLGRYPEVIK 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +   P+ LA YL  LA+ FH +++  R           +  L   RL L++AV  II
Sbjct: 519 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 571

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P EM
Sbjct: 572 RNGLTLLGVSAPEEM 586


>gi|296138955|ref|YP_003646198.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027089|gb|ADG77859.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 550

 Score =  551 bits (1421), Expect = e-154,   Method: Composition-based stats.
 Identities = 187/582 (32%), Positives = 295/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  L      +  +  ++  +L +R+ +ERPR+  HG  +TN AM +++  G++P  
Sbjct: 4   ADLSELLHATATTVLTERGLDVSVLPERVTVERPRNPEHGDYATNLAMQVAKKAGVNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +D   IAG GF+N+ L+     +++ SI+     +G         +
Sbjct: 64  LATWLAEALASADGIDEATIAGPGFLNIRLAADAQNQLVVSILEQKDAFGHGSTLADQVI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++   G EVTREYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPVHLGGARWAAVGDSLGRVLEAQGAEVTREYYFNDHGAQIDRFARSLDA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                        P+  Y G Y+  +   +   +   +L+ P+ + +   +   V+ M  
Sbjct: 184 AA------TGKPTPDDGYAGDYIGEIAATVVQNH-PGILDLPDAERVEAFRADGVELMFD 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L        +F  ED+        +   +D L  QG +YE               
Sbjct: 237 HIKRTLHEFGTDFAVFTHEDEMF--SSGLVEQSVDQLKAQGNLYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GDD DR ++KSDG+  Y A D+AY K K++RGF   IY++G+DH GY
Sbjct: 280 -KDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYLKHKFDRGFTLAIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+    A++ VL+ +LV L +DG P++MSKRAG  ITL  +VD VG D+ R
Sbjct: 339 IGRLKAAAAAMGYDPARVEVLIGQLVNLVKDGKPVRMSKRAGTVITLDDLVDAVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D   + + S ENPV+YVQYA+AR  +I R A ++  +   +     
Sbjct: 399 YSLIRSSVDTSIDLDLDLLTQASNENPVYYVQYAHARLSAIARSAAELGIEGSTEHLGL- 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +  E  L+  L E+P V   A   +EP+++A YL +LA  +H  +S  R  P
Sbjct: 458 ------LDNPREGDLVRTLGEFPGVAAAAASLREPHRVARYLEELAGAYHRFYSECRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      L   R+ L  A   ++ +GL+++GV +P+ M
Sbjct: 512 ---LGDEEPTDLHRARVALCAATRQVLANGLSLVGVSAPDRM 550


>gi|311743944|ref|ZP_07717750.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313074|gb|EFQ82985.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 554

 Score =  551 bits (1421), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/583 (30%), Positives = 296/583 (50%), Gaps = 36/583 (6%)

Query: 6   DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             S  +   L  +       +   + D +++ERP+   HG  +TN A+ L++  G++P  
Sbjct: 5   QLSDAIVGALASLVEAGVLNLPGGVPDTVLVERPKVREHGDYATNIALRLAKQAGVNPRE 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A+ +   +     V +  IAG GF+N+ ++      + + ++ +G  YG   +  G ++
Sbjct: 65  LAQHLADALVGHDGVAAAEIAGPGFLNIRVAAGAQGTVAADVLTAGDAYGSGDLYAGQRI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++   G EVTREYY ND GAQI+  A S+  
Sbjct: 125 NLEFVSANPTGPIHIGGVRWAAVGDCLGRILTAVGGEVTREYYFNDHGAQIDRFARSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  + +++   +     + P+++   + +   V+ M  
Sbjct: 185 SARGQAA------PEDGYGGQYIHDIARDVVAVH-PGAADLPDDEATEVFRAAGVEQMFG 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+D H  +   +   I  L   G +Y+               
Sbjct: 238 EIKASLHDFGVDFDVYFHENDLH--ESGAVDRAIARLTELGKMYQS-------------- 281

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R++  GDD DR ++KSDG   Y + DLAY+  K ERGFD  + ++G+DH GY
Sbjct: 282 --EGATWLRTSDFGDDKDRVVVKSDGEPAYISGDLAYYLDKRERGFDRCLIMLGADHHGY 339

Query: 364 VKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           V R+ A+ AA  ++    + +L+ ++V L RDG P++MSKRAG  ++L  +V+ +G D+ 
Sbjct: 340 VSRMLAMCAAFGDEPGVNLELLIGQMVNLVRDGEPLRMSKRAGTVVSLEDLVEAIGVDAA 399

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +        +D D     +   +NPV+YVQYA+AR  SI R A D+   +D + F  
Sbjct: 400 RYALARYSTDSTIDIDLDLWAKADSDNPVYYVQYAHARLSSILRNAADLGLGVDLEGFDP 459

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             +  + E      +L+  LAEYPR++  A   +EP+++A YL  +A  FH  +   R  
Sbjct: 460 GQLSTDREG-----ELLRSLAEYPRLVARAAELREPHRVARYLESVAGSFHQFYDQCRVL 514

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+      +   L   RL LV A   ++ +GL ++GV +P  M
Sbjct: 515 PQG---DEDATDLHRARLVLVAATRQVVANGLALLGVGAPERM 554


>gi|330469870|ref|YP_004407613.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812841|gb|AEB47013.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 554

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 193/562 (34%), Positives = 305/562 (54%), Gaps = 35/562 (6%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
             + ++  +ERPR+  HG  ++  A+ LS+ +G+ P  +A  + A++   P + SV IAG
Sbjct: 26  SALPEQTTVERPRNPDHGDYASTLALQLSKKVGVPPRELAGDLAAKLGSTPGIKSVEIAG 85

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GF+N+ L  +   ++  +IV +G EYGR  +  G K+N+EFVSANPTGP+H+G  R A 
Sbjct: 86  PGFLNIRLDAAAAGQLARTIVTAGEEYGRGDVLAGLKINLEFVSANPTGPVHIGGVRWAA 145

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           VGD L+ L+  +G +V  EYY NDAG+QI+  A S+    +          PE  Y G Y
Sbjct: 146 VGDALSRLLRAAGADVGTEYYFNDAGSQIDRFARSLLAAAK------GEPAPEDGYGGAY 199

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           +  +  E+  +   E+L+  E+    + +   V+ M   I+  L+   ++ D + +E D 
Sbjct: 200 IAEIANEVTAR-RPEVLSLDEDAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDL 258

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           H  D   +   ++ L  QG+++E                       R+T  GDD DR L 
Sbjct: 259 H--DRGELEHALNRLREQGHIFEA----------------DGATWLRTTDFGDDKDRVLR 300

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVL 384
           KS+G +TYFAAD AY+  K ERGFD ++ ++G+DH GY+ R++A++A   +  AQ + +L
Sbjct: 301 KSNGEWTYFAADCAYYLDKRERGFDRVVIMLGADHHGYIGRMKAMSACFGDDPAQNLEIL 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + +LV L RDG P++MSKRAG  ITL  +VD +G D+ R+ +    +   +D D      
Sbjct: 361 IGQLVNLVRDGAPVRMSKRAGTVITLEDLVDAIGVDASRYALARYSSDSPIDIDIELWTR 420

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLA 503
            +++NPV+YVQY  AR  S+ R A ++     D D F   ++  +      E +L+  LA
Sbjct: 421 ATRDNPVYYVQYVAARTASVGRNAAEVGLTRGDVDAFRPELLDHD-----KENELLKALA 475

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+P V+  A   +EP+++A YL DLA  +H  + + R  PR          L   RL L 
Sbjct: 476 EFPAVVAAAAELREPHRVARYLEDLAGAYHRFYDNCRILPRG---DEEVTDLHRARLWLN 532

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A   +I +GL ++GV +P  M
Sbjct: 533 DATRVVIANGLRLLGVSAPERM 554


>gi|294792712|ref|ZP_06757859.1| arginine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294794463|ref|ZP_06759599.1| arginine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294454793|gb|EFG23166.1| arginine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294456611|gb|EFG24974.1| arginine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 577

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L++      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +  D  ++   +AG GFIN +L    +   L +I+ +G EYG   +   
Sbjct: 61  PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218
           + +R+Q+            N D               PE  Y G  +    K +A++   
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +L    E   + + K+  ++  +  + + L+   +  D + SE   H  +   I   ++
Sbjct: 240 DKLNAMNEADRVALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ESDEIHHSVE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + KY+RGF  MI + G+DH GYV R++A  AA      ++ VLL ++V L+RDG  +
Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  +++EVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q ++            +     +     EL+LI  LAEYP  +  A   + P
Sbjct: 462 ARIHSIYNQVREAG----IAFGNYSETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YLYDLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|303228773|ref|ZP_07315591.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516572|gb|EFL58496.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 577

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L+E      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MDMKEILKSGIEQALQETINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +  D  ++   +AG GFIN +L    +   L +I+ +G +YG   +   
Sbjct: 61  PRAIAETLISHMDFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYSS 219
           + +R+Q+            N D               PE  Y G  +    K +A++   
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239

Query: 220 ELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           + LN   E   + + K+  ++  +  + + L    +  D + SE   H  +   I   ++
Sbjct: 240 DTLNAMNEADRVALFKEEGLKEKLARLEETLSNFRVTFDNWFSERTVH--ETDEIHHSVE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKALGKVYE----------------KNGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + KY+RGF  MI + G+DH GYV R++A  AA      ++ VLL ++V L+RDG  +
Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  +++EVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q ++            +     +     EL+LI  LAEYP  +  +   + P
Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHRAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YLYDLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPSLQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|169628524|ref|YP_001702173.1| arginyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688923|sp|B1MLU2|SYR_MYCA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169240491|emb|CAM61519.1| Arginyl-tRNA synthetase (ArgS) [Mycobacterium abscessus]
          Length = 550

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 300/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L++    +  +  ++   L  +V +ERPR+  HG  +TN A+ +++ +G+ P  
Sbjct: 4   ADLADLLRSTATTVLDERGLDTSALPAVVTVERPRNPEHGDYATNVALQVAKKVGVAPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +V  +     +    IAG GF+NL ++      I+++I+ +G  YG +       +
Sbjct: 64  LAGWLVEALVSHAAIAGAEIAGPGFVNLRIAADAQGTIVANILKAGETYGNSDAQGTHTI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L+A  G +VTREYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLARQGAKVTREYYFNDHGAQIDRFVRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +        + PE  Y G Y+  + K++  +   E L   E +   + ++  V  M  
Sbjct: 184 SAEGK------EAPEDGYAGDYIADIAKQVITQ-RPEALTLTEPERSEVFREIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ L       D+F  ED  H      +++ I  L + G +YE               
Sbjct: 237 HIKESLHEFGTDFDVFTHEDSMHT--SGRVQEAIAQLRKTGNIYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSDG+  Y A D+AY+  K ERGFD  IY++G+DH GY
Sbjct: 280 -KDGASWLRSSNFGDDKDRVVIKSDGNPAYIAGDIAYYLDKRERGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+AVAAA+      + VL+ ++V L RDG P++MSKRAG  ITL  +VD +G D+ R
Sbjct: 339 IARLKAVAAALGYDADSVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVDAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A D+           +
Sbjct: 399 YALIRSSVDTSIDIDLELWASASSENPVYYVQYAHARLCALARNAADLG-------LQHS 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  LI  L E+ R+++NA   +EP+++A YL D+A  +H  +   R  P
Sbjct: 452 TEHLELLTHEKEGALIRGLGEFGRILQNAAALREPHRVARYLEDIAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL+I+GV +P  M
Sbjct: 512 QG---DETPGDLHAARLALCLATRQVIANGLDILGVSAPERM 550


>gi|312898221|ref|ZP_07757612.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620718|gb|EFQ04287.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 554

 Score =  551 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 191/584 (32%), Positives = 300/584 (51%), Gaps = 35/584 (5%)

Query: 6   DFSSRLKNYLKEIDCK----IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           D    +   +K           +       +++E P     G  +TN AM  +R     P
Sbjct: 2   DMKETVIQGIKAALAAAVSAGDLPDGEYPDVLLEVPPQKEFGDFATNIAMQSARIAHKSP 61

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA++++  +   P ++   +AG GFIN +L    +   L  I+  G +YG+  +    
Sbjct: 62  RMIADVLLKHLDA-PWLEKAEVAGAGFINFFLKHDIIYDTLCHILEQGKQYGQAPLRAED 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG Q+N LA SV
Sbjct: 121 TVQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQMNNLAASV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY + L    +++PE  Y G  +    + + ++   + L   E+  L I K+ + +  
Sbjct: 181 NARYLELL-GKKAEIPENGYHGADIIDTARAIIEQDGDKYLQMDEKDRLEIFKNRAYEEK 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K ++ DL++ N+  D + SE   H   P  I+   + L   G +YE             
Sbjct: 240 LKALKRDLESFNVTFDKWFSERTLH---PEAIKKACETLKGNGNMYE------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  +ST  GDD DR +++ +G  TY AAD+AY K KYER F  +I + G+DH 
Sbjct: 284 ---KDGALWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHKNKYERQFKKLINIWGADHH 340

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV R++A  AA+     Q+ +LL ++V L+R+G  +KMSKR G  ITL  +++EVG+D+
Sbjct: 341 GYVARVKAAMAALGLDPNQLEILLLQMVSLFRNGELVKMSKRTGQAITLNELIEEVGTDA 400

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+  + R     LDFD    K  S ENPV+Y+QYA AR  SI++Q  +     D     
Sbjct: 401 ARYFFIMRSLDTQLDFDLDLAKSHSNENPVYYIQYANARIFSIYKQIAENGDVFDMTWKN 460

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I  +   +  EL LI  +A YP  I  A   + P+++A ++Y++A +FH  +++   
Sbjct: 461 ---IKWDKLKEERELALIKKMAAYPEEIRKAAAERAPHRIAHFVYEMAGLFHAFYNNCH- 516

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +  ++++L   RL LV AV   I + L ++G+ +P  M
Sbjct: 517 ------IIQSDKELEEARLALVTAVQITIANCLAVLGISAPETM 554


>gi|282849795|ref|ZP_06259179.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580732|gb|EFB86131.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 577

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 199/607 (32%), Positives = 306/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L++      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +  D  ++   +AG GFIN +L    +   L +I+ +G EYG   +   
Sbjct: 61  PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218
           + +R+Q+            N D               PE  Y G  +    K +A++   
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +L    E   + + K+  ++  +  + + L+   +  D + SE   H  +   I   ++
Sbjct: 240 DKLNAMNEVDRIALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ESDEIHHSVE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + KY+RGF  MI + G+DH GYV R++A  AA      ++ VLL ++V L+RDG  +
Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGRLV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  +++EVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q  +            N     +     EL+LI  LAEYP  +  A   + P
Sbjct: 462 ARIHSIYNQVHEAG----IAFGDYNETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YLYDLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|255324499|ref|ZP_05365616.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255298405|gb|EET77705.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 550

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    ++    +++  +L   + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +  +  V    IAG GFIN+ L+     +I++ I+ +G EYG N    G KV
Sbjct: 64  LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ + + + +K  S  L   +E+     +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSA-LEGSDEEVQEAFRADGVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDSALEKLKAEGHMYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ +LV L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +D +    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VDSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V+E A   +EP+++A Y  DLA+VFH  +   +  P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ + L ++GV +P +M
Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550


>gi|297618464|ref|YP_003703623.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146301|gb|ADI03058.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 559

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 195/582 (33%), Positives = 314/582 (53%), Gaps = 32/582 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            D   ++   L++     K   + +   VIE PR+  HG  + N AM+L+R   + P+ I
Sbjct: 9   DDLRQKIVTALEKAKTGGKFNYQEIPAFVIEVPREKQHGDYACNVAMLLARQARMSPVAI 68

Query: 65  AELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            + I+  +   DP +  V + G GFIN +L   +L  +   +  SG  YG++    G KV
Sbjct: 69  GQAIIDLLPQNDPLISRVEVKGAGFINFFLKEDWLFDVPRVVWQSGESYGQHKPV-GKKV 127

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTG +H+G+ R   +GD+LA++++ +GYEV REYY+NDAG QI    LS+  
Sbjct: 128 QVEFVSANPTGDLHMGNARGGAIGDSLANILSMAGYEVEREYYVNDAGNQIELFGLSLEA 187

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY + L   +   PEG Y G  +    +   + Y   L+     +    + +++++  ++
Sbjct: 188 RYLE-LCGCEFRFPEGGYEGQDVVETVRHFIEAYGDYLVGANPYERRQKLTEFALKEKLE 246

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L+A  I++D++ SE   H  D   I ++ + L  +GY+Y                
Sbjct: 247 SIKTSLEAFGIRYDVWFSEQSLH--DSGKIEEVTEELKTKGYLY---------------- 288

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           +      FR+     + D  +++ +G  TYFAAD+AY K K+ERGFD +I V G+DH G+
Sbjct: 289 LKEGAWWFRAGEDSGEKDEVVIRKNGLPTYFAADIAYHKNKFERGFDWVINVWGADHHGH 348

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R++A  AA+     +++V+L +LVRLYR G  ++MSKR G  +TL  +++EVG D+ R
Sbjct: 349 VARMKAAIAALGYDPNRLDVILMQLVRLYRGGELVRMSKRTGTLVTLDELLEEVGKDAAR 408

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  + R     LDFD    ++QS+ENPV+YVQYA+AR  SI RQA+         L   +
Sbjct: 409 FFFVMRSPDSHLDFDMELAQKQSQENPVYYVQYAHARICSIMRQAERAGIL----LKNPD 464

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +         EL+L+  +AE+P  I  A     P+++A Y+ DLA +FH +++H R   
Sbjct: 465 EVNLRLLCLPEELELLRKVAEFPNEISMAAATLSPHRIARYVLDLAGMFHSYYNHHR--- 521

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V      L   R+ L+ A+  ++ + L ++GV +P  M
Sbjct: 522 ----VLNEEENLRDARMVLMEAIRRVVKNSLGVLGVSAPERM 559


>gi|237747206|ref|ZP_04577686.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378557|gb|EEO28648.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 571

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 202/605 (33%), Positives = 317/605 (52%), Gaps = 56/605 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           + A     + N  +E    +  E + LD+   + +ERPRD +HG ++ N AM L++PL  
Sbjct: 1   MLAQQKQLITNLFREAVDSL-TEGQNLDKHPSVSLERPRDASHGDIACNIAMQLAKPLKK 59

Query: 60  DPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           +P  IA+ I++ +  +P+ +S+     IAG GFINL L+ S  + ++ +++    +YG  
Sbjct: 60  NPRQIAQTILSSVLSNPEHESLIESGEIAGPGFINLRLTSSAKQSVVKTVIKQKEKYGFG 119

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
             G G KV +EFVSANPTGP+HVGH R   +GD +++L    GY VTRE+Y NDAG QI 
Sbjct: 120 NQGAGKKVMVEFVSANPTGPLHVGHGRQGALGDAISTLFETQGYSVTREFYYNDAGVQIE 179

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKW 229
            L LSV  R  + L   D+  PE  Y G Y+  +  +      L  +    +      + 
Sbjct: 180 NLTLSVQAR-AKGLKPGDAGWPESAYNGDYIADIAADFLAGKTLEARNCQPVTGSGNVED 238

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  +++++V  + K   +DL A  I  D F  E   +R     +++ +D L ++G  +E 
Sbjct: 239 LKSIREFAVAYLRKEQDNDLNAFGIHFDNFFLESSLYR--DGKVQETVDTLTKEGKTFES 296

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                              L  ++T  GDD DR + K+DG+YTYF  D+AY   K++RGF
Sbjct: 297 ----------------EGALWLKTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKWKRGF 340

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           D +I V GSDH G V R+ A   AV++       + +L ++V + +DG  +K+SKRAG +
Sbjct: 341 DKVINVQGSDHHGTVARVRAGLQAVNQDIPPGFPDYVLHKMVTVMKDGAEVKISKRAGSY 400

Query: 408 ITLRHVVD-------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           +T+R +++       E G D+VRF ++ RK      FD      +S ENPV+YVQYA+AR
Sbjct: 401 VTVRDLIEWSGAGDVERGRDAVRFFLISRKADTEFVFDVDLALSRSDENPVYYVQYAHAR 460

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             S+F Q       L+       V P E+        L+  LA+YP ++  A     P+ 
Sbjct: 461 ICSVFSQWGGNESVLEHADLSALVSPHEN-------ALLTKLADYPDILVRALDELSPHL 513

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +AFYL +LA   HG+++  R          N+    + RL L+ A   ++ +GL ++GV 
Sbjct: 514 VAFYLRELAGELHGYYNAERF-------LVNDEPTKLARLALLKATRQVLRNGLALLGVS 566

Query: 581 SPNEM 585
           +P +M
Sbjct: 567 APVKM 571


>gi|311740633|ref|ZP_07714460.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304153|gb|EFQ80229.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 550

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 188/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    ++    +++  +L   + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +  +  V    IAG GFIN+ L+     +I++ I+ +G EYG N    G KV
Sbjct: 64  LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ + + + +K  S  L   +E+     +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSA-LEGSDEEVQEAFRADGVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDAALEKLKAEGHMYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ +LV L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +D +    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VDSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V+E A   +EP+++A Y  DLA+VFH  +   +  P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A   ++ + L ++GV +P +M
Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550


>gi|269798641|ref|YP_003312541.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269095270|gb|ACZ25261.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 577

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 197/607 (32%), Positives = 306/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L++      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +     ++   +AG GFIN +L    +   L +I+ +G EYG   +   
Sbjct: 61  PRAIAEALISHMNF-AWLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218
           + +R+Q+            N D               PE  Y G  +    K +A++   
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +L    E   + + K+  ++  +  + + L+   +  D + SE   H  +   I   ++
Sbjct: 240 DKLNAMNEADRVALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ETDEIHHSVE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKALGKVYE----------------KEGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + K++RGF  MI + G+DH GYV R++A  AA      ++ VLL ++V L+RDG  +
Sbjct: 342 AYHRNKFDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  ++DEVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIDEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q ++            +     +     EL+LI  LAEYP  +  A   + P
Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YLYDLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|125974436|ref|YP_001038346.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005211|ref|ZP_05430179.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418961|ref|ZP_06249979.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166232780|sp|A3DGS4|SYR_CLOTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|125714661|gb|ABN53153.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255990865|gb|EEU00979.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281407418|gb|EFB37678.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941572|gb|ADU75606.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 564

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 184/586 (31%), Positives = 314/586 (53%), Gaps = 32/586 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    +  +KN + +     ++ +  +D + IE P++  HG  STN AM  ++ +   P 
Sbjct: 8   IKKQINEVVKNSISKAVQNGELPQFTVDELFIEIPKEKGHGDFSTNIAMQAAKTVRKAPR 67

Query: 63  TIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +AE+I+  + + +  +D V  AG GFIN +L+ ++L  +L  I      YG   IG+G 
Sbjct: 68  QVAEIIIKNMDLSNTYIDRVEAAGPGFINFFLTNAWLYDVLKVIQKEKENYGNLDIGRGQ 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+G+ R   +GD +AS++  +GY+VTRE+YINDAG QI    +S+
Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLEKAGYDVTREFYINDAGNQIEKFGISL 187

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             RY Q L   D+ + PE  Y G  +    K   ++    LL    E+    + +Y++  
Sbjct: 188 EARYIQLLKGEDAVEFPEDGYHGEDIIDHMKAYIEENGDNLLYVDSEERRKTLVEYALPK 247

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ IR  L+   +  D++ SE   +  D   +R+ +D L  +GY +E            
Sbjct: 248 NIERIRKSLENYGVVFDVWFSEQSLY--DNGEVRETLDILKEKGYTFE------------ 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
                   + F+++ +G + D  +++++G  TYFAAD+AY + K+ +R FD +I ++G+D
Sbjct: 294 ----KDGAVWFKASALGAEKDEVIVRNNGIPTYFAADIAYHRNKFLKRKFDRVINLLGAD 349

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G+  R++    A      ++++++ +LVRLYR+G   +MSKR G  I+L  +++EVG 
Sbjct: 350 HHGHAARMKCALKAFDIDPDKLDIVIFQLVRLYRNGEIARMSKRTGRAISLDDLLEEVGR 409

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF    + +   LDFD     ++S ENPV+YVQYAYAR  S+ R    +     F +
Sbjct: 410 DAARFFFNTKASGSHLDFDLDLAVKKSNENPVYYVQYAYARSCSMLR----LLESEGFKV 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +         E++L+  L+EYP  I  +    EP +L  Y+ D+AS FH  ++  
Sbjct: 466 PDVDSVDLTVLKAPEEIELMKKLSEYPEEIRISAQTLEPSRLTRYVLDVASNFHSFYNAC 525

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V+     L   R+ LV +   +I + L+++ + +P +M
Sbjct: 526 R-------VKGEEENLMYARMILVDSTRLVIKNVLDVLSITAPEKM 564


>gi|293399769|ref|ZP_06643915.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306169|gb|EFE47412.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 555

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 195/558 (34%), Positives = 302/558 (54%), Gaps = 37/558 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87
           +++IVIE P+D +HG  STN AM L+R L  +P  IAE +   + ++   ++   IAG G
Sbjct: 34  IEKIVIEIPKDKSHGDYSTNLAMQLTRLLKNNPRVIAEALQQNLDMEAAAIEHCEIAGPG 93

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N  +  + L +I+ +++  G  +G N  G   +VNIE+VSANPTG +H+GH R A  G
Sbjct: 94  FLNFKIKNTSLAQIIKTVLAQGDNFGHNETGNHERVNIEYVSANPTGDLHLGHARGAAWG 153

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D++  LM  SGY+VTREYY+NDAG QI  L  S+  RY++ L      LPE  Y G  ++
Sbjct: 154 DSITRLMKASGYDVTREYYVNDAGNQIVNLGKSLQARYREYL-GLPFVLPEDGYHGEDVR 212

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  +LA  Y        +E  L   K+  +   +  I+ DL    +  D++ SE     
Sbjct: 213 KIAVKLAQTYGQTYAEENDE-NLKFFKEKGIAFELDKIKCDLDNFRVHFDVWSSEQKI-- 269

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   +   +D L  +G  YE                +   L F++T  GDD DR L K+
Sbjct: 270 RDDGKVEKALDVLHEKGLTYE----------------EEGALWFKTTQFGDDKDRVLRKT 313

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           DGSYTY   D+AY K K +RGFD ++ ++G+DH GY+ RL+A   A+     ++ V + +
Sbjct: 314 DGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIQALGNDPEKLQVDIIQ 373

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +VRL  +G  +KMSKR G+ +T+R + DEVG D+VR+  + R     LDFD    ++QS 
Sbjct: 374 MVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHLDFDLGLARKQSN 433

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPV+Y QYA+AR  SI RQA D     ++DL               E+ L+ ++ E+  
Sbjct: 434 DNPVYYAQYAHARICSILRQAPDFKEATNYDLLT----------HEKEISLMKYINEFTN 483

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+ +A   + P+K+  Y+  LA  FH  ++        + +   +  L+  RL L+ A  
Sbjct: 484 VVSDAAKTRAPHKVCNYIQKLAQHFHSFYNAC------KVIDPEHEALSAQRLALLKATR 537

Query: 568 SIINSGLNIIGVESPNEM 585
             + + L +IGV++  +M
Sbjct: 538 ITLKNALFLIGVDAIEKM 555


>gi|289207432|ref|YP_003459498.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943063|gb|ADC70762.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 587

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 200/602 (33%), Positives = 309/602 (51%), Gaps = 60/602 (9%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           + +    ++       + + R RD  HG  ++N AM L+RP    P  +AE + A +   
Sbjct: 14  ETLVADGRIPPDHGVEVQVTRARDREHGDFASNLAMQLARPAKAKPRDLAEALCAAMPAV 73

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
           P +    IAG GFIN  L+     ++L  I   G ++GR+ +G G  V +EFVSANPTGP
Sbjct: 74  PGLAGTEIAGPGFINFRLAADARTQVLGRIAAQGADFGRSSVGNGRPVQVEFVSANPTGP 133

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +HVGH R A  G T+A L+ F G++VTREYY+NDAG Q+N LA SV+ RY +  +     
Sbjct: 134 LHVGHGRGAAFGATVADLLDFCGFDVTREYYVNDAGRQMNILAASVWLRYLEQ-HGVQVP 192

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLN---------FPEE------------------- 227
            P   Y G Y+  V + L  +   + ++          P+E                   
Sbjct: 193 FPTNGYQGDYIYPVAESLTAQIGEQAVHPATAVTRDLPPDEPAGGDKEVYIDAVIARARE 252

Query: 228 ----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
               +    V D  + A+++ IRDDL+   +++  + SE      D   I   + +L   
Sbjct: 253 LLGPELYRTVFDCGLNAILEDIRDDLREFGVEYQCWFSERSL--ADSGAIDAAVQDLQAH 310

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
           G +YE                    L FRST  GDD DR + + +G YTYFA+D+AY + 
Sbjct: 311 GALYE----------------QDGALWFRSTDYGDDKDRVVRRENGDYTYFASDIAYHRE 354

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           K++RGF+ +I + G+DH GYV R+ A   A+  +  +++VLL +   LYR G  + MS R
Sbjct: 355 KFQRGFERVINIWGADHHGYVPRVRAALQALGLEADRLDVLLVQFAILYRGGERLPMSTR 414

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           AG F+TLR + DEVGSD+ RF  + R+  + LDFD    K QS +NP++Y+QYA+AR  S
Sbjct: 415 AGQFVTLRELRDEVGSDAARFFYVQRRCDQHLDFDLDLAKSQSNDNPMYYIQYAHARIAS 474

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           + R A +            +        +  E  L+  L  +P VI  A  A EP+++A 
Sbjct: 475 VLRTAAERGHTAS---ALDDTGLSACLTEPQEDDLLDRLDRFPEVIAAAAEACEPHQIAQ 531

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL +LA+ FH +++       + F+ A +  +   RL L+  +  ++++GL ++GV +P 
Sbjct: 532 YLRELAAGFHTYYNA------VPFLNAEDATVIGARLALLTGIKQVLHNGLRLLGVTAPE 585

Query: 584 EM 585
            M
Sbjct: 586 RM 587


>gi|238060801|ref|ZP_04605510.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882612|gb|EEP71440.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 554

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 190/584 (32%), Positives = 304/584 (52%), Gaps = 36/584 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ +  + +    +     ++   L  R  +ERPR+  HG  ++  A+ LS+ +G+ P  
Sbjct: 4   AELAEVVLSAAHAVFTDRGLDSSALPGRTTVERPRNPEHGDYASTLALQLSKKVGVPPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +  ++     + SV IAG GF+N+ L  +   ++  SIV +G  YGR+    G K+
Sbjct: 64  LATALAEQLGRAAGIKSVEIAGPGFLNIRLDAAAAGQLARSIVEAGPAYGRSTALAGQKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L+ L+  +G +V  EYY NDAG+QI+  A S+  
Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGADVGTEYYFNDAGSQIDRFARSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  E       ++L   ++    + +   V  M  
Sbjct: 184 AAK------GEPAPEDGYGGAYIAEIATE-VRTRRPDVLELADDAAQEVFRVEGVALMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L+   ++ D + +E D H  D   +   +  L  QG+V++               
Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLH--DRGELDQALARLREQGHVFDT-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T  GDD DR L KS+G +TYFAAD AY+  K ERGFD ++ ++G+DH GY
Sbjct: 281 --DGATWLRTTDFGDDKDRVLRKSNGEWTYFAADCAYYLDKRERGFDRVVIMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           + R++A+AA   +  A  + +L+ +LV L RDG P++MSKRAG  +TL  +VD +G D+ 
Sbjct: 339 IGRMKAMAACFGDDPAVTLEILIGQLVNLLRDGQPVRMSKRAGTVVTLEDLVDAIGVDAS 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFP 481
           R+ +    +   +D D       +++NPV+YVQY  AR  S+ R A ++     D + F 
Sbjct: 399 RYALARYSSDSPIDIDVELWTRATRDNPVYYVQYVAARTASVGRNAAEVGLIRGDAEAFR 458

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ++  + E D     L+  LAE+P V+  A   +EP+++A YL +LA  +H  + + R 
Sbjct: 459 PELLAHDKEND-----LLKALAEFPAVVATAAELREPHRVARYLEELAGAYHRFYDNCRI 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            PR          L   RL L  A  ++I +GL ++GV +P  M
Sbjct: 514 LPRG---DEEVTDLHRARLWLNDATRTVIANGLCLLGVSAPERM 554


>gi|254495636|ref|ZP_05108558.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254355206|gb|EET13819.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 586

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 198/611 (32%), Positives = 317/611 (51%), Gaps = 61/611 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  L  +     V   +   I ++R +D AHG  ++N A+IL++P    P  IAE
Sbjct: 5   VEQLLRQALTTLQKSGDVPADLDIEIKVDRAKDSAHGDYASNLALILAKPCRQAPRKIAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           L+V  +     V+ V IAG GFIN +L      +I++ I+    ++GR+ +G+  KV +E
Sbjct: 65  LLVQALPDAAFVEKVEIAGAGFINFFLRSDARSQIIAEILHKEEQFGRSTLGQNQKVLVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA SV+ RY 
Sbjct: 125 FVSANPTGPLHVGHGRSAAFGATLCNVLKAAGYDVTSEYYVNDAGRQMNILAASVWLRYL 184

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------------- 227
           + L      +P   Y G Y+  + + L  ++  + ++   E                   
Sbjct: 185 E-LAAEPVVIPANAYKGEYVIEIAQVLWTQHGKQFVHPWAEILNGMPADEPQGGDKEIYI 243

Query: 228 -------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                            +   +++  ++  I+DDL    + +D + SE    +     I 
Sbjct: 244 DAMIERANVLLGQDAFALFHQHALTTVLDDIKDDLTEFGVHYDNWFSEYSLFQ--DGSIE 301

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             I  L   G+ YE                    L F++T  GD+ DR L++++G  TYF
Sbjct: 302 KGIQALKDAGHTYE----------------QEGALWFKATDFGDEKDRVLVRANGQKTYF 345

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           A+D+AY   KY+RGFD +I + G+DH GYV RL +   A+   +  + VLL +   LYR 
Sbjct: 346 ASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRLRSAVTALGHDERALTVLLVQFAILYRG 405

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +DFD    K +S +NPV+Y+
Sbjct: 406 GDRVQMSTRSGSFVTLRELRQEVGNDAARFFYVARKSEQHMDFDLDLAKSESSDNPVYYL 465

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+ RQ K+     D  +   NV   +      E  LI  +  YP V+E +  
Sbjct: 466 QYAHARICSVLRQLKERGLLWDKAIGLENVHLLDQ---PHETALIALICRYPEVVELSAS 522

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           + EP+++A+YL +LA+  H +++  +       +     +L   RL L+ AV  ++++GL
Sbjct: 523 SCEPHQIAYYLRELANGLHSYYNAVQ-------LLCEQEQLRCARLCLLAAVRQVLSNGL 575

Query: 575 NIIGVESPNEM 585
           +++GV +P  M
Sbjct: 576 DLLGVSAPESM 586


>gi|54023014|ref|YP_117256.1| arginyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81375821|sp|Q5Z0Z9|SYR_NOCFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|54014522|dbj|BAD55892.1| putative arginyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 552

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 187/582 (32%), Positives = 299/582 (51%), Gaps = 34/582 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  L+    ++  +  ++  +L D + +ERPR+  HG  +TN AM +++  G +P  
Sbjct: 4   ADLADLLRATAAKVLAERGLDPAVLPDEVTVERPRNPEHGDYATNLAMKVAKKAGTNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GF+N+ L+ +    +L  ++ +G  YG     +GTK+
Sbjct: 64  LAGWLAEALGAADGITSAEVAGPGFLNIRLAAAAQGAVLEQVLAAGSGYGTADTLRGTKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWASVGDALGRILAAQGADVTREYYFNDHGAQIDRFANSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                        P+  Y G Y+  + +++  ++       P ++   + +   V+ M  
Sbjct: 184 AA------TGQPTPDDGYAGAYIGEIAEQIVAEHPEAPT-LPADQRHELFRAEGVELMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++ +E          +   ++ L   G +YE               
Sbjct: 237 HIKRTLHEFGTDFDVYFNESTLFA--SGAVEQAVETLKASGDLYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                    S+  GDD DR ++KSDG+  Y A D+AYF+ K  RGFD  IY++G+DH GY
Sbjct: 280 -KDGAWWIASSEYGDDQDRVVIKSDGNAAYIAGDIAYFQNKRSRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L RDG  +KMSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IGRLKAAAAAFGDDPATVEVLIGQMVNLVRDGQAVKMSKRAGTVVTLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++    +  +D D      Q  ENPV+YVQYA+AR  SI R A       D+     +
Sbjct: 399 YALVRWSVNSSVDIDLNLWTSQKNENPVYYVQYAHARTASIGRNAA----AFDYASVTPD 454

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +    +E    E +LI  + EYPRV+ +A   +EP+++A YL +LA  +H       +  
Sbjct: 455 LSQLTAE---EEGELIRTIGEYPRVVASAASLREPHRVARYLEELAGAYHRF-QTNSKLR 510

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L         L   RL LV+A   ++ +GL ++GV +P +M
Sbjct: 511 VLPLGDDPVSPLNAARLVLVNATRQVLANGLALLGVSAPEQM 552


>gi|167561324|ref|ZP_02354240.1| arginyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167568554|ref|ZP_02361428.1| arginyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 594

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 201/615 (32%), Positives = 316/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ ++   G  +G +    
Sbjct: 69  LAERIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASSRDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGQPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIEAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEASPDLLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D      ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVLNEWKSRYGATDALFANADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLAS FH  ++  R       V  +   L   R+ L+ A   ++
Sbjct: 527 HAASELAPHAVAFYLRDLASEFHSFYNAER-------VLVDEEALRTARVALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|121999194|ref|YP_001003981.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166232793|sp|A1WZR7|SYR_HALHL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|121590599|gb|ABM63179.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 584

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 208/609 (34%), Positives = 319/609 (52%), Gaps = 59/609 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            +S L   LK +    ++   + L  + +ER RD AHG  + N AM+L++P    P  +A
Sbjct: 5   VASLLAQALKAMREAGELPADLELPEVQVERARDRAHGDYAANTAMVLAKPARQKPRDLA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I +R+     +  V IAG GF+N  L+ +  ++ +   +  G EYGR+ +G G +V+I
Sbjct: 65  ETIRSRLPASEAIAGVEIAGPGFLNFTLTTAARQESVRVALRQGAEYGRSDVGAGHRVHI 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  GD LAS++  +GY V REYY+NDAG Q++ LA S++ RY
Sbjct: 125 EFVSANPTGPLHVGHGRGAAFGDALASVLEAAGYHVHREYYVNDAGRQMDILAASLWLRY 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------------ 227
            +A        P   Y G Y+    +EL +    E +    E                  
Sbjct: 185 LEAA-GEPVSFPNKGYQGDYIVTHARELFEADGREHVRTAAELGAGLPAEDDDPEGYLDA 243

Query: 228 -----------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                           V D++++A++  IR DL A  + +  + SE      D   I   
Sbjct: 244 LVARSRELLGETAYRRVLDFALEAILGDIRADLDAFGVHYHRYFSERQLV--DQGRIEHA 301

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++ L + GY Y                     L F++++ GDD DR L + +G  TYFAA
Sbjct: 302 LERLDQAGYTYRA----------------DGALWFQASVFGDDKDRVLRRDNGLTTYFAA 345

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D+AY   K ERGFD ++ V G+DH GYV R++A   A+     +++V L +   LYR G 
Sbjct: 346 DVAYHLDKIERGFDTLVNVWGADHHGYVPRVQAALKALGVDAERLDVRLVQFAILYRGGE 405

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
            + MS R+G+F+TLR + DEVG D+ RF  + R++ + +DFD    K +S +NPV+Y QY
Sbjct: 406 KLPMSTRSGEFVTLRELRDEVGKDAARFFYVMRRSEQHMDFDLDLAKSESADNPVYYCQY 465

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  S+FRQ ++            +    E      E  L+  L  YP VIE+A +A+
Sbjct: 466 AHARICSVFRQLEERGLACRV---TPDEAALERLDAEHEAILLDLLGRYPEVIESAALAR 522

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP+++A YL +LA+ FH +++       + F+  ++  L   RL LV A   ++ +GL +
Sbjct: 523 EPHQVAQYLRELAAAFHTYYNA------VPFII-DDEALRDARLTLVQATRQVLANGLGL 575

Query: 577 IGVESPNEM 585
           +GV++P  M
Sbjct: 576 LGVDAPQSM 584


>gi|262201839|ref|YP_003273047.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085186|gb|ACY21154.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 550

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 183/561 (32%), Positives = 284/561 (50%), Gaps = 35/561 (6%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E  + D + +ERPR   HG  STN A+ L + LG+ P  +A  +         +    +A
Sbjct: 25  ETLVPDSVGVERPRHADHGDYSTNIALQLGKRLGVSPRELAGWLAEAYAGADGIAKAEVA 84

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+NL+L+ +    +++++V  G EYGR     G+ +N+EFVSANPTGP+H+G  R A
Sbjct: 85  GPGFVNLWLAAAAQNTVIATVVEQGAEYGRGDELGGSVINLEFVSANPTGPIHLGGTRWA 144

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VGD L  ++   G  VTREYY ND G QI+  A S+    Q          PE  Y G 
Sbjct: 145 AVGDALGRVLGARGAAVTREYYFNDHGTQIDRFARSLEAAAQ------GGPTPEDGYAGA 198

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  +   +  +    +L  P+++ +   +   V+ M   I++ L       D+F  ED 
Sbjct: 199 YIGDIAAAVVQQV-PGVLEQPDDERVETFRSVGVELMFAHIKESLHEFGTDFDVFTHEDS 257

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                   + + I  L     +YE                       RST  GDD DR +
Sbjct: 258 MFT--SGLVDECIAELKANDKLYE----------------KDGAWWLRSTEFGDDKDRVV 299

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KSDG+  Y A D+AY + K  RGF   IY++G+DH GY+ RL+A AAA+ +    + VL
Sbjct: 300 IKSDGNAAYIAGDIAYIRDKRNRGFSLCIYMLGADHHGYISRLKAAAAALGDDPDVVEVL 359

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++V L RDG P++MSKRAG  ITL  +V+ VG D  R+ ++       +D D   + +
Sbjct: 360 IGQMVNLVRDGKPVRMSKRAGTVITLDDLVEAVGVDGARYSLIRSSVDVNIDIDLDLLTK 419

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS ENPV+YVQYA+AR  ++ R A D+           ++   +   D +E +LI  + +
Sbjct: 420 QSNENPVYYVQYAHARLSALSRNAADLG-------LQPDLANIDLLVDPAEGELIRTIGD 472

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V+  A   +EP+++  YL  LA  +H  ++  R  P+          +   RL L  
Sbjct: 473 FDEVVATAASLREPHRVCRYLESLAGAYHRFYARCRVLPQG---DEEPADIHRARLALCA 529

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL+++GV +P  M
Sbjct: 530 ATRQVLANGLDLVGVSAPERM 550


>gi|256829388|ref|YP_003158116.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256578564|gb|ACU89700.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 551

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 202/579 (34%), Positives = 315/579 (54%), Gaps = 32/579 (5%)

Query: 10  RLKNYLKEIDCKIKVEKK--ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           + KNY+ E    +   K   +  +  IE P+   HG ++TN  M++ +  G +P T+AE 
Sbjct: 2   KAKNYISEKLTALMAAKGQALPAKTTIEAPKSEQHGDMATNITMVMPKEKGQNPRTVAEA 61

Query: 68  IV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +    + + P+++S+ IAG GFIN    P + +++  + + +  ++GR  +G+G KV +E
Sbjct: 62  LKTELLAMCPEIESIEIAGPGFINFTFKPVFWQEVALAALENKADFGRIDVGQGRKVQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A VGD+L  ++ F+G+EV  EYY+NDAG Q+  L L+V+ RYQ
Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLTRILRFTGHEVETEYYLNDAGRQMRLLGLAVWVRYQ 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QA    +   PE  Y G Y+K +   L  +    LL+ PEE+ L +  +  +  ++  I+
Sbjct: 182 QAC-GIEIPFPEDCYRGDYIKDISAALLAEKGKALLDLPEEEALDLCYERGMTDILNGIK 240

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    ++H  + SE     G    +   ++ L  +G  YE                  
Sbjct: 241 QDLIDFRVEHQHWFSEKSLVDG--GQVEASLNRLLAEGRAYE----------------KD 282

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FRST  GDD DR L KSDG  TYFA+D+AY   K  RGFD M+ + G+DH GYV R
Sbjct: 283 GALWFRSTDHGDDKDRVLRKSDGLLTYFASDIAYHDNKIARGFDMMVDIWGADHHGYVPR 342

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+ + +  + V+L +LV L + G  I MS RAG F TL  V  EVG D+ RF+ 
Sbjct: 343 MKAAIEALGKDRESLQVILVQLVNLIQGGEQIAMSTRAGKFETLADVCAEVGVDAARFIF 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK+QS +NPV+YVQYA+AR  S+ R+A++        L   +   
Sbjct: 403 LSRKSDSHLDFDLDVVKQQSMDNPVYYVQYAHARISSLMRKAEEQG----VALPEPSGAL 458

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   +  L   L  +   +E A     P+ +++YL +LA + H +++         
Sbjct: 459 MALLTTPEDKALFKALDAFEDTLELAARTLSPHHVSYYLMELAGLLHRYYTVHH------ 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++ L   R+ L  AVA ++ +GL+++GV +P  M
Sbjct: 513 ILSGDDQALLQARILLFQAVAGVLKAGLDLLGVNAPERM 551


>gi|78222646|ref|YP_384393.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193901|gb|ABB31668.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 569

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 197/592 (33%), Positives = 303/592 (51%), Gaps = 39/592 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     S +   ++       +    +  IVIE+P    HG  +   AM +++     P 
Sbjct: 8   MKDRVRSLVAEGIERCFADGSLASNQMPAIVIEKPAHAEHGDFACTVAMSMAKAERKAPR 67

Query: 63  TIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IAE IV  I+      +  + IAG GFIN  +      + L+ +  +G  +GR+  G+ 
Sbjct: 68  VIAETIVKHIENGESGIIGGIDIAGPGFINFRIKNEAWSRTLAVVEAAGASFGRSCAGEE 127

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+H+GH R A +GDT+  L++ SG++VTRE+Y NDAGAQI  LALS
Sbjct: 128 RKVQVEFVSANPTGPLHIGHGRGAAIGDTICRLLSASGFDVTREFYYNDAGAQIANLALS 187

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKD 235
           V  R    +   D   P   Y G Y+K V      +E  D     +    +   L  ++ 
Sbjct: 188 VQSRCL-GIEPGDPRWPADGYQGDYIKDVARSYLNRETVDAGDQHVTAAGDPNDLDAIRR 246

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DL A ++  D++  E   +      + +++  L   G+ +E       
Sbjct: 247 FAVAYLRREQDQDLLAFDVHFDVYSLESSLYT--EGRVEEVVRRLIENGHTFE------- 297

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ERGF  +I  
Sbjct: 298 ---------QDGALWLRTTDFGDDKDRVMRKSDGSYTYFVPDVAYHLAKWERGFTRVINE 348

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G+DH   + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR +
Sbjct: 349 QGADHHSTITRVRAGLQALNAGIPQEWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDL 408

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DEVG D+ RF  L RK    L FD    K+QS ENPV+YVQYA+AR  SIF  A D   
Sbjct: 409 IDEVGRDATRFFFLMRKPDSQLVFDIDLAKQQSLENPVYYVQYAHARISSIFEAACDRGI 468

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +       +V   E+     E++LI  +  +P VIE + ++ EP+++ +YL +LA  FH
Sbjct: 469 SVP-SFPDAHVDLLET---PEEIELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFH 524

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V    ++L+  RL L+  VA ++ +GL ++GV +P +M
Sbjct: 525 SFYNKNR-------VIGEGKELSSARLFLLKGVAQVLKNGLALLGVSAPEKM 569


>gi|238018516|ref|ZP_04598942.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748]
 gi|237864987|gb|EEP66277.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748]
          Length = 577

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 195/607 (32%), Positives = 305/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L++      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MEMKEILKSGIEQALQDTINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +  D  ++   +AG GFIN +L    +   L +I+ +G +YG   +   
Sbjct: 61  PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218
           + +R+Q+            N D               PE  Y G  +    K +A++   
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKTIAEREGF 239

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +L    E   + + K+  ++  +  + + L    +  D + SE   H  +   I   ++
Sbjct: 240 DKLNAMNEADRVALFKEEGLKEKLARLEETLSNFRVTFDNWFSERTVH--EADEIHHSVE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + KY+RGF  MI + G+DH GYV R++A  AA      ++ VLL ++V L+RDG  +
Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  +++EVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q ++            +     +     EL+LI  LAEYP  +  +     P
Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHHAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YL+DLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLFDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|152965218|ref|YP_001361002.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083537|sp|A6W7E9|SYR_KINRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151359735|gb|ABS02738.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 554

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 188/585 (32%), Positives = 300/585 (51%), Gaps = 38/585 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+ S+ L++ L       ++      +   + +ERP++  HG  +T+ A+ L++  GL P
Sbjct: 4   AELSAALRDALTAAVAAGELTLDPADVPAEVRVERPKNRDHGDWATSVALQLAKKAGLPP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A L+  R+     V +V IAG GF+N+ L  +   ++  S+V +G  +GR+    G 
Sbjct: 64  REVAALVQRRLLEVEGVRAVDIAGPGFLNVTLDAAAAGELARSVVEAGPAFGRSATPTGE 123

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++N+EFVSANPTGP+H+G  R A VGD+LA ++  +G  VTREYY ND GAQI+  A S+
Sbjct: 124 RINLEFVSANPTGPIHLGGTRWAAVGDSLARVLEAAGATVTREYYFNDHGAQIDRFARSL 183

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R       ND   PE  Y G Y+  +   +  + +  LL+ P E+   + +   V+ M
Sbjct: 184 LARA------NDEPAPEDGYGGDYVTDIAAAVLAE-APGLLDLPREEQQEVFRREGVELM 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              IR  L    ++ D++  ED  H      +   +  L   G +YE             
Sbjct: 237 FAEIRQSLAEFGVEFDVYFHEDSLHT--SGAVGRAVQKLRDLGRIYEA------------ 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     R++  GDD DR ++KSDG   Y + DLAY+  K ERGFD  + ++G+DH 
Sbjct: 283 ----DGATWLRTSDFGDDKDRVVIKSDGHPAYISGDLAYYLDKRERGFDRCVLMLGADHH 338

Query: 362 GYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           GYV R+ A+ AA  +     + +L+ ++V L +DG+P++MSKRAG  +T+  +V+ VG D
Sbjct: 339 GYVPRMMAMCAAFGDTPGVNLEILIGQMVNLLKDGVPVRMSKRAGTVVTMEDLVEAVGVD 398

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+ ++       +D D   +  +S +NPVFYVQYA+A      R A          + 
Sbjct: 399 AARYSLVRSSVDSSIDIDLDLLTRRSNDNPVFYVQYAHA------RTANVAVNAAAAGVR 452

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +        + +E  L+  LAE+P V+  A   +EP+++A YL +LA  FH  +   R
Sbjct: 453 REDAFDPSLLTEETESLLLAALAEFPAVVARAGELREPHRVARYLEELAGRFHKFYDACR 512

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             PR          +   RL L  A   ++ +GL ++GV SP+ M
Sbjct: 513 VTPR---AGEEVTDVHRTRLWLNDATRQVLANGLGLLGVSSPDRM 554


>gi|74318800|ref|YP_316540.1| arginyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|109895051|sp|Q3SF80|SYR_THIDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|74058295|gb|AAZ98735.1| arginyl-tRNA synthetase, class Ic [Thiobacillus denitrificans ATCC
           25259]
          Length = 557

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 195/587 (33%), Positives = 288/587 (49%), Gaps = 44/587 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   ++     +  +  +   + IERP++  HG  S+NAAM L+RPL  +P  +A+
Sbjct: 7   LKDQLALLIEAALEALAPDAPV--SLEIERPKNPTHGDFSSNAAMQLARPLKRNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LIV  +     V    IAG GFIN +L+P+    I+  +  +G ++GR       +V IE
Sbjct: 65  LIVTELPASTLVAKADIAGAGFINFHLTPAAWHGIVRQVRTAGAQFGRAQRETPQRVLIE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD L +L A  G++V RE+Y NDAG QI TLA SV  R +
Sbjct: 125 FVSANPTGPLHVGHGRQAALGDALCNLYAAQGWDVYREFYYNDAGVQIATLAASVQARAR 184

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             L   D+  PE  Y G Y+  + ++            E     +   L  ++ ++V  +
Sbjct: 185 -GLQPGDATWPEAAYNGDYIADIARDFLAGKTVKSDDREFTASGDVDDLDSIRQFAVAYL 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DL+A  +  D +  E   +      +   +  L   G  YE             
Sbjct: 244 RHEQDLDLRAFAVHFDNYYLESSLYT--DGRVDATVQRLVAAGKTYE------------- 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF   I + G+DH 
Sbjct: 289 ---QDGALWLRTTEYGDDKDRVMKKSDGTYTYFVPDVAYHIAKWERGFARAINIQGTDHH 345

Query: 362 GYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           G + R+ A   A  V   +   + LL  +VR+ R G  +K+SKRAG ++TLR +++    
Sbjct: 346 GTIARVRAGLQAASVGIPEGYPDYLLHTMVRVMRGGEEVKISKRAGSYVTLRDLIEWTSK 405

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKDIFPDLDFD 478
           D+VRF +L RK      FD      ++ +NPV+YVQYA+AR   +F   + D+    D D
Sbjct: 406 DAVRFFLLSRKADTEYVFDIDLALARNNDNPVYYVQYAHARICRVFEEWSGDVATLADAD 465

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L P             EL L+  LAEYP  + +A     P+ L  YL  LA  FH  ++ 
Sbjct: 466 LAPLEAA--------HELALMQRLAEYPETVASAARDLAPHLLVHYLQMLAGDFHAWYNA 517

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           +      RL L  A   +I +GL ++GV++P +M
Sbjct: 518 EKF-------LVADEATKRARLALADATRIVIVNGLALLGVDAPEKM 557


>gi|160914601|ref|ZP_02076815.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991]
 gi|158433141|gb|EDP11430.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991]
          Length = 547

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 200/561 (35%), Positives = 302/561 (53%), Gaps = 37/561 (6%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIA 84
           + + + IVIE PRD +HG  STN AM L+R L  +P  IA+ I+  +  D    +S  IA
Sbjct: 23  ELVAEDIVIEIPRDLSHGDYSTNMAMQLTRILKNNPRVIAQGIIEHLDHDAANIESCEIA 82

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN  +  + + +I++ ++ +G  YG N  GKG KVN+E+VSANPTG +H+GH R A
Sbjct: 83  GPGFINFVIRKTSMAEIIARVLEAGDHYGENETGKGQKVNVEYVSANPTGDLHLGHARGA 142

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
             GD++  LM  SGY+V REYY+NDAG QI  L LS+  RY++ L   D  LPE  Y G 
Sbjct: 143 AWGDSITRLMKASGYDVCREYYVNDAGNQIINLGLSLQARYREYL-GMDFTLPEDGYHGE 201

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K +   LA +Y        +   L   K+  ++  +  I+ DL    +  D++ SE  
Sbjct: 202 DVKKIAIALAKEYGEAYAEEND-ANLKFFKEKGIEFELNKIKRDLDYFRVHFDVWSSEQA 260

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
               D   +   +  L  +G  YE                +   L F +T  GDD DR L
Sbjct: 261 I--RDAGKVETALAQLHEKGLTYE----------------EDGALWFATTKFGDDKDRVL 302

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            K DGSYTY   D+AY K K +RGFD ++ ++G+DH GY+ RL+A   A+     ++ V 
Sbjct: 303 RKKDGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIEALGNDPDKLQVD 362

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++VRL  +G  +KMSKR G+ +T+R + DEVG D+VR+  + R      DFD    ++
Sbjct: 363 IIQMVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHFDFDLGLARK 422

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS +NPV+Y QYA+AR  SI RQA  + P   ++L               E+ L+ ++ E
Sbjct: 423 QSNDNPVYYAQYAHARICSILRQAPQLAPAQSYELLT----------HEKEIALMKYINE 472

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V+ +A   + P+++  Y+  LA  FH  ++        + +  NN  L+  R+ L+ 
Sbjct: 473 FSGVVSDAAKYRAPHRVCNYVQKLAQHFHSFYNAC------KVIDMNNEALSAQRIALLK 526

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    + + L  IGVE+  +M
Sbjct: 527 ATKITLKNALAFIGVEATEKM 547


>gi|302529809|ref|ZP_07282151.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302438704|gb|EFL10520.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 554

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 191/582 (32%), Positives = 296/582 (50%), Gaps = 32/582 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A  +  +++   ++     V+  +L   + IERPR+  HG  +TN A+ +++  GL P  
Sbjct: 4   AALADLVRSSAVQVLAARGVDAAVLPETVTIERPRNPDHGDYATNLALQVAKKAGLKPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            AE +   +     V +  +AG GF+N  L+     +++  ++ +G EYGR     G ++
Sbjct: 64  FAEALAEVVAGADGVAAAEVAGPGFLNFRLAADAQGEVVRQVLAAGAEYGRGDALAGRRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++   G +VTREYY NDAGAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLGAQGADVTREYYFNDAGAQIDRFVRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  E+     S  L+ PE +     +   ++ M  
Sbjct: 184 AAK------GEPAPEDGYAGGYISDIAAEVLKAEPSA-LSLPEVQRHETFRRIGIELMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+  H  +   +   +  L   G +Y                
Sbjct: 237 QIKQSLHEFGTDFDVYFHENSLH--ESGAVDAAVQQLKDSGNLYFA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +S+  GDD DR +LK DG+  Y A DLAYFK K  RGFD  IY++G+DH GY
Sbjct: 281 --DGAWWLKSSEYGDDKDRVVLKKDGNPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L  DG P++MSKRAG  ITL  +V+ VG D  R
Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVSDGKPVRMSKRAGTVITLEDLVEAVGVDPAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D   +++ S +NPV+YVQYA+AR  S+ R A D+   +D      +
Sbjct: 399 YELIRYSVDSSLDIDLDLLRKHSNDNPVYYVQYAHARLSSLRRGAADLGLKVDESGADAD 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                     +E  LI  + E+P V+  A   +EP+++A YL +LA  +H  ++ GR  P
Sbjct: 459 FGLLTL---PAEGDLIRTIGEFPAVVRRAAEMREPHRVARYLEELAGAYHKFYTVGRVLP 515

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL L  A   ++ +GL+++GV +P  M
Sbjct: 516 QG---DEEATPLTYARLALCEAARQVLANGLSLLGVSAPERM 554


>gi|109894994|sp|Q39VQ6|SYR_GEOMG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 197/592 (33%), Positives = 303/592 (51%), Gaps = 39/592 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     S +   ++       +    +  IVIE+P    HG  +   AM +++     P 
Sbjct: 1   MKDRVRSLVAEGIERCFADGSLASNQMPAIVIEKPAHAEHGDFACTVAMSMAKAERKAPR 60

Query: 63  TIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IAE IV  I+      +  + IAG GFIN  +      + L+ +  +G  +GR+  G+ 
Sbjct: 61  VIAETIVKHIENGESGIIGGIDIAGPGFINFRIKNEAWSRTLAVVEAAGASFGRSCAGEE 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EFVSANPTGP+H+GH R A +GDT+  L++ SG++VTRE+Y NDAGAQI  LALS
Sbjct: 121 RKVQVEFVSANPTGPLHIGHGRGAAIGDTICRLLSASGFDVTREFYYNDAGAQIANLALS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKD 235
           V  R    +   D   P   Y G Y+K V      +E  D     +    +   L  ++ 
Sbjct: 181 VQSRCL-GIEPGDPRWPADGYQGDYIKDVARSYLNRETVDAGDQHVTAAGDPNDLDAIRR 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DL A ++  D++  E   +      + +++  L   G+ +E       
Sbjct: 240 FAVAYLRREQDQDLLAFDVHFDVYSLESSLYT--EGRVEEVVRRLIENGHTFE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ERGF  +I  
Sbjct: 291 ---------QDGALWLRTTDFGDDKDRVMRKSDGSYTYFVPDVAYHLAKWERGFTRVINE 341

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G+DH   + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR +
Sbjct: 342 QGADHHSTITRVRAGLQALNAGIPQEWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DEVG D+ RF  L RK    L FD    K+QS ENPV+YVQYA+AR  SIF  A D   
Sbjct: 402 IDEVGRDATRFFFLMRKPDSQLVFDIDLAKQQSLENPVYYVQYAHARISSIFEAACDRGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +       +V   E+     E++LI  +  +P VIE + ++ EP+++ +YL +LA  FH
Sbjct: 462 SVP-SFPDAHVDLLET---PEEIELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFH 517

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V    ++L+  RL L+  VA ++ +GL ++GV +P +M
Sbjct: 518 SFYNKNR-------VIGEGKELSSARLFLLKGVAQVLKNGLALLGVSAPEKM 562


>gi|313894351|ref|ZP_07827916.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441175|gb|EFR59602.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 577

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 52/607 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  L++      +       IV+E P     G  STN AM  +R    +
Sbjct: 1   MEMKEILKSGIEQALQDTINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE +++ +  D  ++   +AG GFIN +L    +   L +I+ +G +YG   +   
Sbjct: 61  PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+VSANPTGP+HVGH R A  G  L +L+  +GY V  EYYINDAG QI+ +A+S
Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179

Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218
           + +R+Q+            N D               PE  Y G  +    K +A++   
Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +L    E   + + K+  ++  +  + + L+   +  D + SE   H  +   I   I+
Sbjct: 240 DKLNAMNEADRIALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ETEEIHHSIE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G VYE                    L  +ST  GDD DR +++ +G  TY AAD+
Sbjct: 298 ALKVLGKVYE----------------KNGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY + KY+RGF  MI + G+DH GYV R++A  AA      Q+ +LL ++V L+RDG  +
Sbjct: 342 AYHRSKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDQLTILLLQMVALFRDGELV 401

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+GD +TL  ++DEVG D+ R+  L R     LDFD    K +S +NPV+Y+QYA+
Sbjct: 402 KLSKRSGDSVTLDELIDEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI+ Q ++            +     +     EL+LI  LAEYP  +  +   + P
Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHRAP 517

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++A YLYDLAS+FH  +  GR       +   +  L   RL L+ A+A ++  GL I+G
Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570

Query: 579 VESPNEM 585
           + +P +M
Sbjct: 571 ISAPEKM 577


>gi|15836752|ref|NP_297440.1| arginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9104936|gb|AAF82960.1|AE003868_6 arginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 586

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 186/592 (31%), Positives = 301/592 (50%), Gaps = 37/592 (6%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ A   + +   ++ +     +    L    V+ERP+   HG  +TN AM+LS+  G +
Sbjct: 24  HVKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSN 83

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +VA +    D+  + IAG GFIN +L P   ++   +++    +YGRNL G+ 
Sbjct: 84  PRLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQRETINVLKQDNDYGRNLSGQS 143

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+VSANPTGP+HVGH R A +GD LA L+  +G+ V RE+Y NDAG QI  L  S
Sbjct: 144 RTVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIENLVRS 203

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKD 235
           V  R +  L   D+  P   Y G Y+  + K      S  +++              +  
Sbjct: 204 VQARAR-GLKPGDAFWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHH 262

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  +      DL A N+  DI+  E   ++     + + +  L   G+ YE       
Sbjct: 263 FAVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE------- 313

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                    +   L  +ST  GDD DR + KSDGSYTYF  D+AY   K++RG++  I  
Sbjct: 314 ---------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITE 364

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +G+DH G + R+ A   A+           +L ++V + R G  +K+SKR+G ++TLR +
Sbjct: 365 LGADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDL 424

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++E  +D+ R+ ++ RK    L FD    +++S +NPVFYVQYAYAR  S+  QA +   
Sbjct: 425 IEETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNL 484

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           + D       +   +   D + L L++ ++ YP +++ A    EP+ +A YL +LA  FH
Sbjct: 485 NYDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFH 541

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + +         V   N      +L L  A   ++ +GLN++GV +P +M
Sbjct: 542 TWYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 586


>gi|311898368|dbj|BAJ30776.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 551

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 193/565 (34%), Positives = 306/565 (54%), Gaps = 35/565 (6%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
            ++   + + + +ERP++  HG  +TN A+ L++P G  P  +AE++  R++    V  V
Sbjct: 21  GELTVDVPEHVTVERPKNRDHGDYATNVALQLAKPAGRPPRAVAEILAGRLRGITGVAKV 80

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GF+N+ L  +   ++  +IV +G  YGRN   KG ++N+EFVSANPTGP+H+G  
Sbjct: 81  DIAGPGFLNITLDAATQGELARTIVEAGEAYGRNEALKGLRINLEFVSANPTGPIHIGGV 140

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R A VGD+LA ++  +G EV+ EYY+NDAG QI   A S+          N   +PE  Y
Sbjct: 141 RWAAVGDSLARVLKATGAEVSTEYYLNDAGVQITKFAKSLKA------SANGQPVPEDGY 194

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            G Y+  + K +  +    +L+ PE++ L + +   ++ M+  I+  +    +  D + S
Sbjct: 195 VGEYIADIAKAVT-EGVPGVLDLPEDEQLQVFRTEGLKLMVAEIQRSMAEFGVHFDTWFS 253

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   H  D   +   I+ L  QG+V++                    +  R+T  GDD D
Sbjct: 254 ERTLH--DSGAVEKAIERLREQGHVFD----------------REGAIWLRTTDFGDDKD 295

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ- 380
           R L+K+DG  TYFAAD AY+  K +RG +  +Y++G+DH GYV RL+A+AA   +   + 
Sbjct: 296 RVLIKADGETTYFAADAAYYLSKRDRGAEVSVYMLGADHHGYVNRLKAIAACAGDDMDRN 355

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           I V++ + V++ RDG  +++SKRAG+ IT+  VVD +G D+ R+M++ +     +  D  
Sbjct: 356 IEVMIGQFVKMLRDGKEVRLSKRAGNIITIDDVVDWIGVDAARYMLVRQSTDSTITIDID 415

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            V  Q+ ENPVFYVQYA+AR  ++ R A +       D  P      E      E  L+ 
Sbjct: 416 VVTSQTAENPVFYVQYAHARMSAVQRNAVEKGITRSADFKP------ELLSSEWENDLLG 469

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L E+PRV+  A   +EP+ +A YL  LA  +H  + + +  P+          LT  RL
Sbjct: 470 QLGEFPRVLAKAGELREPHHVATYLEKLARSYHRFYDNCQILPKG---DEEVTDLTHARL 526

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A  + + +GL ++GV +P  M
Sbjct: 527 WLADATRTTLANGLGLLGVSAPERM 551


>gi|328952027|ref|YP_004369361.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452351|gb|AEB08180.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 556

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 201/586 (34%), Positives = 319/586 (54%), Gaps = 31/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ +   L+ +  +  ++        ++ P+   HG  +TNAA++L++ +   
Sbjct: 1   MSMKKRVAALIMQALETLKSQALLDILETPSFQVDVPKLAEHGDFATNAALLLAKSVRRA 60

Query: 61  PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  +AELI   +   P +   V IAG GFIN +L  +Y  ++L  I  +G  YG++ +G 
Sbjct: 61  PRRVAELIRDNLNPPPGMLARVEIAGPGFINFFLEGTYWLQVLDDIASAGGTYGQSTMGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +EFVSANPTGP+HVGH R A +GD LA++++ +G+ V REYYIND G Q+ TL L
Sbjct: 121 GKSVQVEFVSANPTGPLHVGHGRGAALGDALANILSATGHRVEREYYINDIGLQMQTLGL 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  R ++ L       PE  Y G Y+K + ++  +++    L  P+   L     Y+ +
Sbjct: 181 SLLLRVKE-LQGEPVSFPENCYQGDYIKVLARQYLEQHGPISLEEPDAAALEAGGRYAGE 239

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A++  IR DL    +  D + SE    +     +      L  +GY+YE           
Sbjct: 240 AILAGIRQDLADFGVHFDHWFSETRLFQDHD--LDHAFAALQERGYLYEA---------- 287

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L F++T  GD+ DR + + +G+ TYFA+D+ Y   K++RGF  +I + G+D
Sbjct: 288 ------DGALWFKATAFGDEKDRVVRRQNGATTYFASDIGYHWQKFQRGFHQVIDIWGAD 341

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GYV RL+AV  A+     ++ +LL +LV L R+G P+ M+ R G F+TLR V+DEVG 
Sbjct: 342 HHGYVPRLKAVVQALGIPAERLTILLVQLVSLLREGEPVAMTTRGGTFVTLREVMDEVGK 401

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF+ L R+    L+FD    K+QS ENPV+YVQYA+AR  S+FR A++     + D 
Sbjct: 402 DAARFIFLSRRADAHLEFDLELAKQQSNENPVYYVQYAHARLASVFRLAQEKGLAGEADQ 461

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E+ L+  LA YP V+E A    EP+++ ++L +LA   HG++   
Sbjct: 462 SA----NLTRLTLPEEITLLKLLATYPEVVEAAAFHLEPHRITYFLTELAGQLHGYYYRH 517

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R         +++  L+  RL+LV  + +I+  GL ++GVE+P  M
Sbjct: 518 RF-------ISDDADLSRARLRLVRGIKTILAHGLGLLGVEAPENM 556


>gi|58580117|ref|YP_199133.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424711|gb|AAW73748.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 590

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 191/592 (32%), Positives = 308/592 (52%), Gaps = 37/592 (6%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +
Sbjct: 28  HVKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 87

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ ++  +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G
Sbjct: 88  PRALAQALLTALPDSNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNG 147

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALS
Sbjct: 148 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 207

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235
           V  R  Q L  + +  PE  Y G Y+  V          D     +    +   L  ++ 
Sbjct: 208 VQAR-AQGLTPDSAGWPENGYRGDYIADVANAYLTGDTVDMEGHLVTGTKDPADLESIRR 266

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE       
Sbjct: 267 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 317

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                    +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  
Sbjct: 318 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 368

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +G+DH G + R+ A   A+     +     +L ++V + RDG  +K+ KRAG ++TLR +
Sbjct: 369 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYVTLRDL 428

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++   
Sbjct: 429 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 488

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D       +       D   L +++ L+ YP V+E A    EPY++A YL +LA  FH
Sbjct: 489 KYDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH 545

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 546 TWYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 590


>gi|158312858|ref|YP_001505366.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|229558759|sp|A8L3U5|SYR_FRASN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158108263|gb|ABW10460.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 570

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 199/594 (33%), Positives = 308/594 (51%), Gaps = 40/594 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+ +  +   ++       +E  + D + +ERPR   HG  ++  A+ L++     P  +
Sbjct: 4   AELADTIVAAVRAAVANGDLEVAVPDSVTVERPRQPEHGDYASPVALQLAKAARRRPREV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AEL+ AR++ +  V  V +AG GF+N+ L+ + L  I   IV  G  YGR  + +G +VN
Sbjct: 64  AELLAARLRAEAGVAEVEVAGPGFLNIRLAGAALGGIARRIVRDGESYGRAAVSQGVRVN 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+ +   R A VGD L+ + A +GYEV  EYY+NDAG Q+     SV   
Sbjct: 124 LEFVSANPTGPVTLASARWAAVGDALSRVFAAAGYEVGTEYYVNDAGVQVERFGASVLA- 182

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKE-----------LADKYSSELLNFPEEKWLPIV 233
              AL    +  P   Y G Y+  +  +           LA     +     ++K L + 
Sbjct: 183 ---ALRGQPA--PADGYQGAYVAEIAAKVLAANPALEQLLAASGGEQDSGAEQDKALAVC 237

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               V+ M+  IR  L    +++D++ SE   H  +   +   ID L  QG+VYE     
Sbjct: 238 ARDGVELMLAEIRATLSGFGVEYDLWKSERSLH--EAGELIAAIDELRTQGHVYEA---- 291

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          +  R+T  GDD DR L+KSDG  TYF AD AY++ K  RGFD + 
Sbjct: 292 ------------GGAVWLRTTDFGDDKDRALIKSDGRPTYFCADAAYYRDKRRRGFDRLC 339

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y++G+DH GY+ RL+A++A   +     ++VL+ ++V L R G+ +KMSKRAG+F+TL  
Sbjct: 340 YLLGADHHGYIGRLKAISACFGDDPDHNLDVLIGQMVTLSRGGVAVKMSKRAGNFLTLHD 399

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +VD VG D+ R+ ++       LD D   +  Q+ +NPVFYVQYA+AR  S+ R A  + 
Sbjct: 400 LVDAVGVDAARYSLVRASMDSALDLDLDAIARQTNDNPVFYVQYAHARISSLIRNAAALG 459

Query: 473 PDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                D  F  + +         E+ L+  L E PRV+E+A   + P+++A YL +LA  
Sbjct: 460 LATSADPAFDVDGVDVSLLTHPREVDLLGALGELPRVVESAAELRAPHRIARYLEELAGT 519

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H  +   R  P+          +T  RL L  A  +++ +GL ++GV +P  M
Sbjct: 520 YHRFYDSCRVLPQG---DEEPTAITAARLLLAEATRTVLANGLRLLGVSAPERM 570


>gi|270159345|ref|ZP_06188001.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165835|ref|YP_003455973.1| arginine tRNA synthetase [Legionella longbeachae NSW150]
 gi|269987684|gb|EEZ93939.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859008|emb|CBJ12936.1| arginine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 586

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 204/611 (33%), Positives = 330/611 (54%), Gaps = 61/611 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               LK+ L  +    ++   +   I I+R +D AHG  ++N A++L++P    P  IAE
Sbjct: 5   VEQLLKHALISLQKSGEMPDNLDVEIKIDRAKDSAHGDYASNLALVLAKPCRQSPRKIAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           L+V  I  DP V+ + IAG GFIN ++  +   KI++  +  G  +G + IGK  KV +E
Sbjct: 65  LLVKAIPADPVVEKIEIAGAGFINFFIHSNSRSKIIAEALEKGNRFGCSTIGKNQKVLVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA SV+ RY 
Sbjct: 125 FVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTVEYYVNDAGRQMNILAASVWLRYL 184

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEEK---------- 228
           + L      +P   Y G Y+  + +EL  K++ E ++         P ++          
Sbjct: 185 E-LSGEPVAIPANAYKGDYVSEIAQELWLKHNREYVHPWATVIEGLPLDEPHGGDKEIYI 243

Query: 229 --------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                            +   +++  +++ I+DDL    +++D + SE      +   I+
Sbjct: 244 DALVARMKILLSMPVFSLFHQHALNTVLEDIQDDLAEFGVKYDNWFSEQSLF--EDGSIQ 301

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             I  L   G+ +E                    L FR+T  GD+ DR L++++G  TYF
Sbjct: 302 KGIQALKDSGHTFE----------------KEGALWFRATDFGDEKDRVLVRANGHTTYF 345

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           A+D+AY   KY+RG+D +I + G+DH GY+ RL AV  A+   ++ ++VLL +   LYR 
Sbjct: 346 ASDVAYHWNKYDRGYDRIIDIFGADHHGYITRLRAVVKALGHDESTLDVLLVQFAILYRG 405

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +DFD    K +S +NPV+Y+
Sbjct: 406 VERVQMSTRSGSFVTLRELRQEVGNDAARFFYVARKSEQHMDFDLDLAKSESNDNPVYYI 465

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  S+ RQ K+     D  +  +++   E E +T    LI  ++ YP V+E A +
Sbjct: 466 QYAHARICSVLRQLKERGLFWDQAMGLKHLDLLEQEHETH---LISLISRYPEVVELAAV 522

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP+++A+YL ++A+  H +++          +     +L   RL L+ AV  +I +GL
Sbjct: 523 HCEPHQVAYYLREVANGLHSYYNAV-------PLLCEQEQLRCARLCLLEAVRQVIYNGL 575

Query: 575 NIIGVESPNEM 585
            ++GV +P  M
Sbjct: 576 GLLGVSAPESM 586


>gi|167835227|ref|ZP_02462110.1| arginyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 594

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 315/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P     VD+  IAG GFINL L+P+  + ++ ++   G  +G +   +
Sbjct: 69  LAERIVAALTTQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASERER 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDAEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIEAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEASPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L    + P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVLNEWKSRYGATDALLPGAELSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  +       R+ L+ A   ++
Sbjct: 527 HAANELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARVALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|71275891|ref|ZP_00652174.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon]
 gi|71901382|ref|ZP_00683475.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
 gi|71163268|gb|EAO12987.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon]
 gi|71728841|gb|EAO30979.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
          Length = 562

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 186/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TN AM+LS+  G +P
Sbjct: 1   MKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    D+  + IAG GFIN +L P   +    +++    +YGRNL G+  
Sbjct: 61  RLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQHETINVLKQDNDYGRNLSGQSR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD LA L+  +G+ V RE+Y NDAG QI+ L  SV
Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIDNLVRSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236
             R +  L   D+  P   Y G Y+  + K      S  +++              +  +
Sbjct: 181 QARAR-GLKPGDALWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A N+  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDGSYTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+           +L ++V + R G  +K+SKR+G ++TLR ++
Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+ R+ ++ RK    L FD    +++S +NPVFYVQYAYAR  S+  QA +   +
Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +   +   D + L L++ ++ YP +++ A    EP+ +A YL +LA  FH 
Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +         V   N      +L L  A   ++ +GLN++GV +P +M
Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562


>gi|254187942|ref|ZP_04894454.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254196876|ref|ZP_04903300.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|157935622|gb|EDO91292.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|169653619|gb|EDS86312.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 594

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    
Sbjct: 69  LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALTAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|258592259|emb|CBE68568.1| arginyl-tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 557

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 206/585 (35%), Positives = 311/585 (53%), Gaps = 34/585 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L    +  L   +K+   +  + +     +  E P D   G LST  A  L++ L   P 
Sbjct: 5   LKTRLTEALLTTIKQSGFEAGLPQGASTPMTWEYPSDPVFGDLSTTLAFGLAKALRQRPR 64

Query: 63  TIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA  I A        VD V +AG G++N +++  + R +   I+ +G  YGR  +G G 
Sbjct: 65  DIAMQIAASAAFPSDLVDRVEVAGAGYLNFFIARPFWRHLAQEILRAGPTYGRADVGGGR 124

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +EFVSANPTGP+ V + R A +GD +A L+   G+   REYY+NDAG Q  TLAL++
Sbjct: 125 PVLVEFVSANPTGPLVVVNARAAAIGDAIARLLEAIGHRPYREYYVNDAGNQFRTLALAM 184

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R +Q L   D  +PE  YPG YL  + +E  D++  E+L+ PE +    +  ++V+ +
Sbjct: 185 EVRCRQ-LQGEDCPMPEEAYPGEYLIDLAREFLDQHGPEVLSAPEPERRDRLGRFAVERI 243

Query: 242 MKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++  R  L+A  +  D + SE +   RGD + +   I+ L  + ++YE            
Sbjct: 244 IEWQRASLEAYGVTFDGWFSERNLRERGDTTQV---IEALKARSFLYE------------ 288

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   + FRST+ GDD DR L+K DG  TYF  D+AY + K+ RGF  +I + G DH
Sbjct: 289 ----QDGAVWFRSTLFGDDKDRVLVKGDGEITYFLPDIAYHQDKFARGFAQVIDLWGPDH 344

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYV R++A   A+      + +L+ +LVRL R    ++MSKRAG F+T+  +VDEVG D
Sbjct: 345 HGYVPRMQAAMQALGHPPGALKILIVQLVRLMRGTEQVRMSKRAGQFVTMGELVDEVGRD 404

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  L R+    LDFD   VK  S+ENPV+YVQYA+ R   I R+A      +     
Sbjct: 405 AARYTFLTRRCDSQLDFDLELVKSASEENPVYYVQYAHTRLCGILREATRAQLPV----- 459

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P      +      E+ LI  LA YP ++  A  A EP++L  YL+DLA+ FHG+++  R
Sbjct: 460 PSPEDNLDRLDLPEEIGLIKQLALYPELVIGAAQALEPHRLTTYLHDLAAQFHGYYARHR 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + + +  LT  RL LV A+  ++ + L ++GV +P  M
Sbjct: 520 -------IISADTNLTRARLTLVAALRVVMANTLGLLGVSAPERM 557


>gi|23822211|sp|Q9PGZ9|SYR_XYLFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 186/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TN AM+LS+  G +P
Sbjct: 1   MKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    D+  + IAG GFIN +L P   ++   +++    +YGRNL G+  
Sbjct: 61  RLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQRETINVLKQDNDYGRNLSGQSR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD LA L+  +G+ V RE+Y NDAG QI  L  SV
Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIENLVRSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236
             R +  L   D+  P   Y G Y+  + K      S  +++              +  +
Sbjct: 181 QARAR-GLKPGDAFWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A N+  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDGSYTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+           +L ++V + R G  +K+SKR+G ++TLR ++
Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+ R+ ++ RK    L FD    +++S +NPVFYVQYAYAR  S+  QA +   +
Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +   +   D + L L++ ++ YP +++ A    EP+ +A YL +LA  FH 
Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +         V   N      +L L  A   ++ +GLN++GV +P +M
Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562


>gi|28198052|ref|NP_778366.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|71899271|ref|ZP_00681433.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
 gi|182680680|ref|YP_001828840.1| arginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130169|sp|Q87F22|SYR_XYLFT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238691058|sp|B2I6M4|SYR_XYLF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28056112|gb|AAO28015.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|71731004|gb|EAO33073.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1]
 gi|182630790|gb|ACB91566.1| arginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579142|gb|ADN63111.1| arginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 562

 Score =  544 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 186/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TN AM+LS+  G +P
Sbjct: 1   MKAPVRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    D+  + IAG GFIN +L P   ++   +++    +YGRNL G+  
Sbjct: 61  RLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQRETINVLKQDNDYGRNLSGQSR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD LA L+  +G+ V RE+Y NDAG QI  L  SV
Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIENLVRSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236
             R +  L   D+  P   Y G Y+  + K      S  +++              +  +
Sbjct: 181 QARAR-GLKPGDALWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A N+  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDGSYTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+           +L ++V + R G  +K+SKR+G ++TLR ++
Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+ R+ ++ RK    L FD    +++S +NPVFYVQYAYAR  S+  QA +   +
Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +   +   D + L L++ ++ YP +++ A    EP+ +A YL +LA  FH 
Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +         V   N      +L L  A   ++ +GLN++GV +P +M
Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562


>gi|53718023|ref|YP_107009.1| arginyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126438772|ref|YP_001057463.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126452586|ref|YP_001064713.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134279771|ref|ZP_01766483.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167717831|ref|ZP_02401067.1| arginyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167813955|ref|ZP_02445635.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167822473|ref|ZP_02453944.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167909276|ref|ZP_02496367.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|226200340|ref|ZP_03795884.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237810613|ref|YP_002895064.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|242315778|ref|ZP_04814794.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254182011|ref|ZP_04888608.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|81380564|sp|Q63Y06|SYR_BURPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232767|sp|A3NQU2|SYR_BURP0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232768|sp|A3N542|SYR_BURP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52208437|emb|CAH34371.1| putative arginyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126218265|gb|ABN81771.1| arginine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126226228|gb|ABN89768.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134248971|gb|EBA49053.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|184212549|gb|EDU09592.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|225927662|gb|EEH23705.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237503627|gb|ACQ95945.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|242139017|gb|EES25419.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 594

 Score =  544 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    
Sbjct: 69  LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|302038582|ref|YP_003798904.1| arginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606646|emb|CBK42979.1| Arginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 584

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 201/600 (33%), Positives = 309/600 (51%), Gaps = 42/600 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
              S  L   L+    +  ++ + +  I +E P+    G +S   AM LS      P  I
Sbjct: 8   DKVSQALVGALRSAQQRGMLKLEQMPTINLEAPKRPEWGDVSCTVAMSLSASERRPPFEI 67

Query: 65  AELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           A++IV  I+  D       IA  GF+NL +       +L  I   G  YG +L+G+G +V
Sbjct: 68  AQIIVDHIEQRDALFSRAEIARPGFLNLTVKRELWMDVLREIEAQGERYGHSLVGRGRRV 127

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+VSANPTGP+HVGH R A VG  L  L+  +G++V  EYYINDAG Q+  L LSV  
Sbjct: 128 LVEYVSANPTGPLHVGHGRGAAVGQALVRLLRATGHDVVSEYYINDAGRQMKLLGLSVLA 187

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY++A        PE  Y G Y++ V + +  +    LL+ P        +D++ + ++ 
Sbjct: 188 RYREAC-GQPVSFPEDGYHGGYIRTVAEHVKAEQGVVLLSLPAADAEQRSRDFAYRELLA 246

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +IR DL+   I  + + SE          +  ++  L  +  +++               
Sbjct: 247 LIRQDLETFGIAFESWFSEASL--LSSGAVEQVLSELRARDLLFD--------------- 289

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                  FRS+  GD+ DR + K +G YTY A+D+AY + K  RGFD ++ V G+DH GY
Sbjct: 290 -QEGAQWFRSSAFGDEKDRVVRKQEGDYTYLASDIAYHRDKLRRGFDLLVDVWGADHHGY 348

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + R++AV  A    K ++ V+L ++V L R G  ++MSKR+G+FITLR V+DEVG+D+ +
Sbjct: 349 IPRMQAVVQAYGYPKERLRVVLVQMVNLLRGGQKVEMSKRSGEFITLREVMDEVGADAAK 408

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  L R +S  LDFD    K+QS+ENPV+YVQY +AR  S+ R A              +
Sbjct: 409 FFFLMRDSSTHLDFDLELAKQQSQENPVYYVQYVHARIASLRRVAASRGIACPL----PS 464

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN- 542
                   D  EL LI  L+ +P V++ + +  EP+++A+YL +LA + H  ++  R   
Sbjct: 465 QADLNVLEDPDELALIRKLSAFPVVLQASAVELEPHRMAYYLRELAGMVHPFYNKHRILP 524

Query: 543 -----------------PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                            P  R  +A    LT  RL L+ AV  ++ +GLN++GV +P +M
Sbjct: 525 PAPDSEAVTAASTEQVAPSARTAEAMTPGLTGARLALMWAVQQVVRNGLNVLGVSAPEQM 584


>gi|217967868|ref|YP_002353374.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336967|gb|ACK42760.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 550

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 206/582 (35%), Positives = 319/582 (54%), Gaps = 35/582 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
               +   +K+    +K ++  +     I++E P+   +G  +T  A+ +++     P  
Sbjct: 1   MRKHIYELIKKAVNSLKEKENFIVDDIEIIVETPKQKEYGDYATAVALQIAQKNKKPPRV 60

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AE I   IK  P V  + IAG GFIN +L+   L + L  ++   I+    +  K  K+
Sbjct: 61  VAEKISEYIKKSPFVKKIEIAGPGFINFFLNDEALWETLR-LIRKDIDDFVKIPSKKKKI 119

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF S NPTGPMH+ H R   +GD+LA+L    G+   +E+YINDAG QI+ L  S++ 
Sbjct: 120 QIEFGSINPTGPMHIAHARGVTIGDSLANLFKRIGWNTEKEFYINDAGNQIDLLGESLYA 179

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY Q L   D  +PE  Y G YL  + KEL ++  S++ +  E +     K+Y++  M++
Sbjct: 180 RYMQLL-GYDYQVPEEGYHGYYLIELAKELLNQ-KSQIESMDETEKKKFFKEYALSKMLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +++D++ SE   H  +   ++++++ L + GY YE               
Sbjct: 238 DIKTTLLNFGVEYDVWFSERTLH--ENGKVKEVLEILRQNGYTYE--------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                L F ST  GD+ DR L+KSDG  TYF AD+AY   K +RGFD +I V G+DH G+
Sbjct: 281 -KDGALWFSSTKFGDEKDRVLIKSDGKATYFLADIAYHLNKIQRGFDWIIDVWGADHHGH 339

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+    A+   K  + ++L ++VRL R    IKMSKR GDFITL+ + +EVG D++R
Sbjct: 340 VTRLKGAIQALGYPKDILEIILVQMVRLMRGNEEIKMSKRTGDFITLKEIQEEVGKDAIR 399

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  L R     LDFD    K+QS ENPV+YVQYA+ARC SI + A+       ++L   +
Sbjct: 400 FFFLLRSPESQLDFDINLAKKQSVENPVYYVQYAHARCCSILKNAETKG----YNLADLD 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +  E  LI++L  YP  +E+ T   E ++L FYL +L+++FHG++   +   
Sbjct: 456 KADLSLLKEEKEKDLILNLLRYPERLEDITRTLEIHQLPFYLLNLSTLFHGYYDSYK--- 512

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V + +++LT+ RL LV  V  II   L+I+GV +P +M
Sbjct: 513 ----VISEDKELTLARLVLVDCVRIIIKDALSILGVSAPEKM 550


>gi|170729360|ref|YP_001774793.1| arginyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687898|sp|B0U1H9|SYR_XYLFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167964153|gb|ACA11163.1| Arginine--tRNA ligase [Xylella fastidiosa M12]
          Length = 562

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 185/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TN AM+LS+  G +P
Sbjct: 1   MKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    D+  + IAG GFIN ++ P   +    +++    +YGRNL G+  
Sbjct: 61  RLLAQTLVAALPTSADIARIEIAGPGFINFHMHPVAYQHETINVLKQDNDYGRNLSGQSR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD LA L+  +G+ V RE+Y NDAG QI+ L  SV
Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIDNLVRSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236
             R +  L   D+  P   Y G Y+  + K      S  +++              +  +
Sbjct: 181 QARAR-GLKPGDALWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A N+  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDGSYTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+           +L ++V + R G  +K+SKR+G ++TLR ++
Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+ R+ ++ RK    L FD    +++S +NPVFYVQYAYAR  S+  QA +   +
Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +   +   D + L L++ ++ YP +++ A    EP+ +A YL +LA  FH 
Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +         V   N      +L L  A   ++ +GLN++GV +P +M
Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562


>gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 547

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 196/581 (33%), Positives = 317/581 (54%), Gaps = 36/581 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK--ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
               ++  + E    +  +    + +R  +E+P+    G  +TN A +L++ +  +P  +
Sbjct: 1   MKELVRERILEAVTSVYGDDAAAVAERATVEKPKKSEFGDFATNVAFLLAKVVRQNPRVV 60

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+ + A++    + + V +AG GFIN +LS      +L  +V    ++  + +G G KV 
Sbjct: 61  AQELAAKLSGVEEFEKVEVAGGGFINFFLSQKAYENLLVQVVE--TDFYVSDVGGGEKVL 118

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+VSANPTGP+HVGH R AVVGD L  +M  +GY   RE+YINDAG QI  L LS++ R
Sbjct: 119 LEYVSANPTGPLHVGHGRGAVVGDVLYRIMRLTGYVPEREFYINDAGRQIRLLGLSIYLR 178

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +Q L   + +LPE  Y G Y+  + K+L ++   +LL+ PEE+ + +   +  + ++K 
Sbjct: 179 AKQ-LKGENVELPEDAYRGDYIVELAKKLLEEVRPDLLDLPEEEAVEVAAQFGKEELLKE 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I  DLK L ++ D + SE   H  D   I +++  L  +G +YE                
Sbjct: 238 IEADLKKLRVEFDNWFSEKSLH--DSGKIEEVLKLLEEKGLLYE---------------- 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L  ++T+ GDD DR + +S G YTYFAAD+AY   K +RG+D  + V G+DH GY+
Sbjct: 280 KDGALWLKTTLFGDDKDRVVKRSTGEYTYFAADIAYHYDKLKRGYDRAVDVWGADHHGYI 339

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R+EA   A+   +  + V+L ++V+L++ G  +KMSKR GDF+ LR ++++VG D VRF
Sbjct: 340 PRVEAALKALGAPEGWLEVVLIQMVKLFKGGKEVKMSKRKGDFVPLRWLMEQVGVDPVRF 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L +++   LDFD       S +NPV+YVQYA+AR  S+  +AK+         F  + 
Sbjct: 400 FFLLKRHDTPLDFDLDLAVSTSSDNPVYYVQYAHARLCSVLDKAKERG-------FLPSK 452

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              +      E +LI    +    ++ A   +EP++L +YL +LAS  H  ++       
Sbjct: 453 ENLDLLSSDEERKLITGCYQLKYELQQAAQKREPHRLTYYLIELASTLHRFYNKH----- 507

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +  +N +LT  RL LV AV   + +GL I+ V +P  M
Sbjct: 508 -KVINEDNPQLTRARLYLVEAVRKTVATGLAILNVSAPRRM 547


>gi|167736849|ref|ZP_02409623.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 594

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKDDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    
Sbjct: 69  LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|15827558|ref|NP_301821.1| arginyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230035|ref|YP_002503451.1| arginyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432208|sp|P45840|SYR_MYCLE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782977|sp|B8ZR24|SYR_MYCLB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13093108|emb|CAC31508.1| arginyl-tRNA synthase [Mycobacterium leprae]
 gi|219933142|emb|CAR71222.1| arginyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 550

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 188/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR+  HG  S+N AM L + +G +PL 
Sbjct: 4   ADLAELLKTTAIVVLAERGLDAAALPQTVTVERPRNPEHGDYSSNLAMQLGKKVGANPLE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     +  V +AG GFIN+ L  S    I+++++ +   +G +    G ++
Sbjct: 64  LAGWLAEVLAQAGGIADVEVAGPGFINMRLDASAQAMIVNTVINADKNFGHSDDLAGYQI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  L++  G  V REYY ND GAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQIDRFTNSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +  L       P   Y G Y+  +  ++  + +   L+ PE +    V++  V  M  
Sbjct: 184 AAKGELT------PADGYAGTYVTDIAAQVMQQ-APYALSLPESEMHETVREIGVDLMFT 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  ED  H      + + I  L   G VYE               
Sbjct: 237 HIKKSLHEFGTDFDVYTHEDSMHA--SGRVDEAIARLRDTGNVYE--------------- 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                L  R++  GDD DR ++KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY
Sbjct: 280 -KDGALWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA  +  A + VL+ ++V L  DG  ++MSKR+G+ ITL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAAFGDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D       S ENPV+YVQYA+AR  ++ R A +            +
Sbjct: 399 YSLIRSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAAEFG-------LIPD 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  + E+P+V++ A   +EP+++  YL DLA  +H  +   R  P
Sbjct: 452 TGHLELLSHDKEGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          L   RL L  A   +I +GL I+GV +P  M
Sbjct: 512 QG---DEKPTDLHTARLALCQANRQVIANGLAILGVSAPERM 550


>gi|313673413|ref|YP_004051524.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940169|gb|ADR19361.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 542

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 211/579 (36%), Positives = 313/579 (54%), Gaps = 37/579 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +K  + E   + +++        IE P+   +G  S+N A +LS+ L   P+ IA 
Sbjct: 1   MEDLIKEVIDEALKRYELKSV---NYTIEIPKKSENGDFSSNVAFVLSKALKQRPIDIAN 57

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV+ I    +   V +A  GFIN +LS       L + ++   ++    IG   K  +E
Sbjct: 58  EIVSYIDKK-NFSKVEVAPPGFINFFLSKEPYYNFLKA-IIEKPDFHIEKIGNNKKAMVE 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R +  GDT+A L+  SG+ V +EYYINDAG Q+N LALS++ RY 
Sbjct: 116 FVSANPTGPLHIGHGRGSAYGDTIARLLNISGFNVYKEYYINDAGNQMNNLALSIYSRYC 175

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L+  D   P   Y G Y+  + K++A+KY   LLN  E   + I  +  V+ ++  I 
Sbjct: 176 E-LFGKDYPFPADGYKGEYIIDIAKDIAEKYQDNLLN-DEINGIKICFEIGVKTILDGIE 233

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL+   +  D + SE   +  +   +   I+ L + GY+YE                  
Sbjct: 234 ADLRDFRVTFDNWFSEKSLY--ESQEVEKTIELLKKNGYIYE----------------KD 275

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F+S  +GDD DR + +S G YTYFA+D+AY K K+ERGF+ ++ V G+DH GYV R
Sbjct: 276 NALWFKSEQLGDDKDRVIKRSTGEYTYFASDIAYHKNKFERGFEYLVDVWGADHHGYVNR 335

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L+    A+      + + L ++V L + G  I MS RAG+FITLR ++DEVG+D+ R+  
Sbjct: 336 LKNGVKALGIDVENLKIQLIQMVSLIKGGERISMSTRAGEFITLRWLLDEVGTDAARYFY 395

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R  +   DFD    K +S +NPV+Y+QYA+AR  S+ R AK+   D            
Sbjct: 396 LMRDINSQFDFDIDLAKSKSNDNPVYYIQYAHARVCSLKRNAKEKGIDFKISN------D 449

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E     SEL++I  L ++  VI+ ATI  EP+++ +YL DLA +FH ++ +        
Sbjct: 450 LELLTLPSELEIIKKLYDFKNVIKTATINLEPHRICYYLQDLAGLFHTYYYN------TT 503

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V  N+ K T  RL L  AVA  I+ GLNI+GV +P  M
Sbjct: 504 IVDENDLKTTNARLSLSEAVAKTISLGLNILGVSAPERM 542


>gi|227501671|ref|ZP_03931720.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077696|gb|EEI15659.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 550

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 184/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K     +  +  ++  +L D + +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLVKESATAVMAEHDLDASVLPDSVTVERPRNPEHGDYATNLALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
               +  ++     +    IAG GFIN+ L+ +   +I++ I+ +G +YG N    G K+
Sbjct: 64  FGGWLAEKLAQHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   + +K  S  L     +     +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGDYIHDIASAVVEKNPSA-LEGDAAQVQEAFRADGVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGVDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +  +    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VSSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+ +A   +EP+++A Y  +LA VFH  +   +  P
Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   RL L  A   ++++ L ++GV SP +M
Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550


>gi|114327924|ref|YP_745081.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316098|gb|ABI62158.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 591

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 251/595 (42%), Positives = 359/595 (60%), Gaps = 21/595 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           ++A   + +   L  +     +  ++  R+ +   RD  HG ++TNAAMI ++P G  P 
Sbjct: 5   IYALIRTHVLEALARVVP--DLPAELTARVEVTPTRDPLHGDMATNAAMIAAKPAGKPPR 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A+ + A +    +++    AG GF+N++L     R  + +I+ +GI YG    G G +
Sbjct: 63  DLAQALSAALAGVTEIERAEPAGPGFVNMHLRAEAWRMRIPAILEAGIRYGDGSAGYGKR 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VNIE+VSANPTGPMH+GHCR AVVGD LA+LM  +GY VT+EYYINDAGAQ+  LA + +
Sbjct: 123 VNIEYVSANPTGPMHIGHCRGAVVGDALANLMGKAGYTVTKEYYINDAGAQVIALAWAAY 182

Query: 183 WRYQQALYNNDSD------LPEGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230
           WRY QAL    ++      +P G  Y G YL  VG+ELA  +   L            WL
Sbjct: 183 WRYLQALGTTLTEDEYAAQVPCGLQYRGDYLVPVGEELARLHGDTLAGPGTTVADSALWL 242

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V++++V  MM  IR+DL  L +  D+F SE    +         I+ L + G +YEG+
Sbjct: 243 NTVREFTVAQMMASIREDLDLLGVHPDVFSSELALLQ--SGAADAAIERLQQDGLIYEGV 300

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L PPK KT    +  R+Q LFRST  GDDVDRPL KSDG+ TYFA D+AY   K  R  D
Sbjct: 301 LEPPKGKTPDDWE-PREQTLFRSTSFGDDVDRPLRKSDGTNTYFANDIAYHADKATR-AD 358

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++ V+G+DH GYV R++A   A+   +A    +LC++V + RDG P++MSKRAG ++TL
Sbjct: 359 IVVDVLGADHGGYVPRVKAAMRAI-APQAIYEAVLCQIVHVVRDGQPVRMSKRAGTYVTL 417

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +++EVG D+VRF ML RK+   ++FD  +   Q++ENPVFYVQYA+ARC S+ R A +
Sbjct: 418 RDLLEEVGRDAVRFTMLTRKSDAQMEFDLDQALAQTRENPVFYVQYAHARCCSVLRMAAE 477

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                  +      +  +S    +EL LI  LA +PR++E A  A+EP+++AF+LY+LA 
Sbjct: 478 QGLTTQPEALRHAAL--DSLTSDAELTLIRRLAGWPRIVEAAAQAREPHRIAFFLYELAG 535

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FH  W+ GR++  LRF+Q +    T  RL LV A A +I SGL ++GV   NEM
Sbjct: 536 DFHMLWNKGRDDATLRFIQQDRTTETTARLALVEAAAIVIRSGLAVMGVAPVNEM 590


>gi|213964728|ref|ZP_03392928.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952921|gb|EEB64303.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 550

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 183/586 (31%), Positives = 292/586 (49%), Gaps = 37/586 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M   AD +  ++    E+      +  I+     +ERPR+  HG  +TN AM L + +G+
Sbjct: 1   MNP-ADLAVLVRKVTVEVLTSHDADVSIVPENPTVERPRNPEHGDYATNIAMQLGKRVGM 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A  I   +     +D   IAG GFIN+ L+     KI+  ++ +G ++G      
Sbjct: 60  VPRDLATEIATALGASEGIDEAIIAGPGFINIRLASDAQGKIVEEVLAAGEKWGHADFNS 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              VN+EFVSANPTGP+H+G  R A VGD L  +++ +G +VTREYY ND G QI+  + 
Sbjct: 120 NLDVNLEFVSANPTGPIHLGGTRWAAVGDALGRVLSATGAKVTREYYFNDHGRQIDRFSD 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+    +          PE  Y G Y++ +   + +K + + L   EE+     +   V 
Sbjct: 180 SLVAAARNQ------PTPEDGYGGEYIQDIAAAVLEK-NPQALEGSEEEVQEHFRAIGVD 232

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M + I++ L       D++  E+     +   +   +++L   G +YE           
Sbjct: 233 MMFEHIKESLHEFGTDFDVYFHENSLF--ESGQVEAAVNSLKENGKLYEA---------- 280

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       +ST  GDD DR ++KSDG   Y A D+AY K K++RG +  IY++G+D
Sbjct: 281 ------DGAWWLKSTDYGDDKDRVVIKSDGDAAYIAGDIAYVKNKFDRGHNLCIYMLGAD 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL A AAA+      + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G 
Sbjct: 335 HHGYIARLRAAAAALGYNADGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVESIGV 394

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++       LD D      QS +NPV+YVQY +AR  SI R+A++     +   
Sbjct: 395 DAARYSLIRSSVDSSLDIDLGLWASQSSDNPVYYVQYGHARLCSIGRRAEETGVTSEGAD 454

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           F           +  E +LI  + E+P +I++A   +EP+++A Y   LA VFH  +   
Sbjct: 455 FSL-------LVEDHEGELIRTIGEFPAIIKSAADLREPHRIARYAEQLAGVFHRFYDTC 507

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  P+         +L   RL L  A    + + L ++GV +P  M
Sbjct: 508 QILPK---ADEEVSELHRARLGLAEATRQTLANALQLLGVTAPERM 550


>gi|292490188|ref|YP_003525627.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291578783|gb|ADE13240.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 585

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 189/614 (30%), Positives = 305/614 (49%), Gaps = 60/614 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       +   L  +  +  +       I ++R RD  HG  ++N  M+L++     P 
Sbjct: 1   MKEQLRKLIVTALSSLQQEGMLPHWDTHNIQVKRTRDKRHGDFASNITMMLAKEARQKPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A LIV+R+   P V+ V IAG GFIN  L+    + ++S ++    ++G + +G+   
Sbjct: 61  DLAGLIVSRLPEHPWVEKVEIAGPGFINFTLALPAFQAVVSLVLDQREDFGCSNLGQNKP 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V++EFVSANPTGP+HVGH R A  GD LA L+   GY++ REYY+NDAG Q++ LA SV+
Sbjct: 121 VHLEFVSANPTGPLHVGHGRGAAYGDALARLLTTVGYKIHREYYVNDAGRQMDILAASVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGK------------------------------- 211
            RY + L       P   Y G Y++ + +                               
Sbjct: 181 LRYLE-LCGETLPFPANGYRGSYVRDIAQVLKTEKDDIFHRPGQEILDGLPPDAPTGDKE 239

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  D    +  +   E+    V D  + +++  IR+DL    + +D + SE   H  +  
Sbjct: 240 QYIDALIQKCKDLLGERGYRQVFDQGLNSILADIREDLAEFGVTYDEWFSER--HLMETG 297

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   ++ L    ++Y+                      FRST  GD+ DR +++ +G  
Sbjct: 298 AVEQAVEQLKTSSHLYQ----------------KEGAWWFRSTDFGDEKDRVVIRENGQP 341

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA+D+AY   K ERG+  +I V G+DH GYV+R+++   A+     Q+ + L +   L
Sbjct: 342 TYFASDIAYHLNKLERGYPKIIDVWGADHHGYVQRVKSSLQALGADPQQLEIRLVQFAIL 401

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           YR    ++MS R+G+F+TLR +  EVG D+ RF  + R   + +DFD    K QS ENPV
Sbjct: 402 YRGKEKVQMSTRSGEFVTLRELRQEVGKDAARFFYVMRSAEQHMDFDLELAKSQSNENPV 461

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +YVQYA+AR  S+FRQ ++     D     +     +   ++ E+ L+  L+ Y  V+E+
Sbjct: 462 YYVQYAHARISSVFRQLEERGLAWD---PKQGRKQLQKLNESHEVALLDRLSCYSEVVED 518

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P+ LA+YL DLA  FH +++             +  +L   RL L+ A   +I 
Sbjct: 519 AATQSAPHLLAYYLMDLARDFHTYYNAHTF-------LVDTPELRDARLTLIAATQQVIK 571

Query: 572 SGLNIIGVESPNEM 585
           +GL ++GV +P  M
Sbjct: 572 NGLTLLGVSAPEAM 585


>gi|302869607|ref|YP_003838244.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315503931|ref|YP_004082818.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
 gi|302572466|gb|ADL48668.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315410550|gb|ADU08667.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 555

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 187/584 (32%), Positives = 302/584 (51%), Gaps = 35/584 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ +  +      +  +  +++  L  +  +ERPR+  HG  ++  A+ LS+ +G+ P  
Sbjct: 4   AELAEVVLAAAHAVFDERGLDRAALPAQTTVERPRNPDHGDYASTLALQLSKKVGVPPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +   P + SV IAG GF+N+ L  +   ++   IV +G  YGR+    G ++
Sbjct: 64  LATALADELAKAPGIKSVEIAGPGFLNVRLDAAAAGQLAKVIVEAGPAYGRSDTLAGQRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L+ L+  +G +V  EYY NDAG+QI+  A S+  
Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGADVGTEYYFNDAGSQIDRFARSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  E+  +   ++L+ PE+    + ++  VQ M  
Sbjct: 184 AAK------GEPAPEDGYGGAYIAEIAAEVV-RLRPDVLDLPEDAAQEVFRNEGVQLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L+   ++ D + +E D H G    +   +D L  QG+V+E               
Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLHDG--GALDAALDRLREQGHVFES-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T  GDD DR L KS+G +TYFAAD AY+  K ERGFD ++ ++G+DH GY
Sbjct: 281 --EGATWLRTTEFGDDKDRVLRKSNGEWTYFAADCAYYLNKRERGFDRVVIMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           + R++A++A   +  A+ + +L+ +LV L RDG P++MSKRAG  +TL  +VD +G D+ 
Sbjct: 339 IGRMKAMSACFGDDPARNLEILIGQLVNLVRDGAPVRMSKRAGTVVTLEDLVDAIGVDAA 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +        +D D         +NPV+YVQY  AR   + R A +I           
Sbjct: 399 RYALARYSADSPIDIDVELWTRAKNDNPVYYVQYVAARTAGVARNAAEIG----LTRGDA 454

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGRE 541
                E      E +L+  LAE+P V+  A   +EP+++A YL + +A  +H  + + R 
Sbjct: 455 AAFQPELLGHDKENELLKALAEFPAVVATAAELREPHRVARYLEESVAQAYHRFYDNCRI 514

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P+              RL L  A   +I +GL+++GV +P  M
Sbjct: 515 APQG---DEEITDTHRARLWLNDATRVVIANGLHLLGVSAPERM 555


>gi|53724623|ref|YP_101930.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76812104|ref|YP_332006.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121601263|ref|YP_994392.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385045|ref|YP_001027962.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126448815|ref|YP_001081819.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167001851|ref|ZP_02267643.1| arginine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167917308|ref|ZP_02504399.1| arginyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217419591|ref|ZP_03451097.1| arginine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238562825|ref|ZP_00439796.2| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254176934|ref|ZP_04883591.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202041|ref|ZP_04908405.1| arginyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254259734|ref|ZP_04950788.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254359822|ref|ZP_04976093.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81605730|sp|Q62MY7|SYR_BURMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109894976|sp|Q3JWP7|SYR_BURP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232764|sp|A3MNI3|SYR_BURM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232765|sp|A2S7P3|SYR_BURM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232766|sp|A1V839|SYR_BURMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52428046|gb|AAU48639.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76581557|gb|ABA51032.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121230073|gb|ABM52591.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293065|gb|ABN02334.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126241685|gb|ABO04778.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147747935|gb|EDK55011.1| arginyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|148029036|gb|EDK86968.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160697975|gb|EDP87945.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217396895|gb|EEC36911.1| arginine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238521851|gb|EEP85299.1| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062445|gb|EES44631.1| arginine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254218423|gb|EET07807.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 594

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 199/615 (32%), Positives = 317/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    
Sbjct: 69  LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 DKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  + +     R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|296119500|ref|ZP_06838058.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967383|gb|EFG80650.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 550

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 190/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  LK    ++     ++  +L   + +ERPR+  HG  +TN A+ +++  G++P  
Sbjct: 4   ADLSLLLKESALQVFESHDLDTSVLPEAVTVERPRNPEHGDYATNVALQVAKKAGVNPRQ 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AE +   +     +D   IAG GF+N+ L+ +   +I+S I  +G  YG        KV
Sbjct: 64  LAEWLAEALAKSDAIDVAEIAGPGFLNIRLAAAAQGEIVSQIAAAGANYGNGEAMADLKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  +   +G  VTREYY ND G QI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRIFEAAGATVTREYYFNDHGGQIDRFARSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  E+  +    L   P E      +   V+ M +
Sbjct: 184 AAKN------EPTPEDGYGGQYIHDIAAEVLRQKDDALEGTPAEV-QENFRSLGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+ DL    +  D++  E+     +   +   +D L   G +YE               
Sbjct: 237 QIKQDLHEFGVDFDVYFHENSLF--ESGAVDKALDQLKTSGQMYET-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG +  IY++G+DH GY
Sbjct: 281 --EGAWWLKSTDYGDSKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L RDG+ +KMSKRAG  IT+  +V+ +G D+ R
Sbjct: 339 VPRLKAAAAALGYDADAVEVLIGQMVNLLRDGVAVKMSKRAGTVITMNDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D      QS ENPV+YVQY +AR  SI R+A++    +  D    +
Sbjct: 399 YSLVRSSVDQSIDIDLGLWAAQSSENPVYYVQYGHARLCSIQRKAEEAG--VTSDAADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+  +   +EP+++A Y  DLASVFH  +   +  P
Sbjct: 457 LLTHEREGD-----LIRTLGEFPAVVAESAQLREPHRVARYAEDLASVFHKFYDQCQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +   RL L  A   ++ + L ++GV +P +M
Sbjct: 512 K---AGDEAEPIHGARLALAQATRQVLANALGMVGVSAPEKM 550


>gi|300692742|ref|YP_003753737.1| arginyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079802|emb|CBJ52479.1| Arginyl-tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 600

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 197/621 (31%), Positives = 297/621 (47%), Gaps = 69/621 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E      IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LSP+    +L+++      YG      G  V
Sbjct: 66  IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLAAVFAESDRYGAADTHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALASLLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +      D+  PE  Y G Y+  +  +              +    + + L  ++ ++
Sbjct: 186 RAR-GFKPGDAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      ++  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVQQTVDALIDAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A      +   K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLGLGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDAESEAGVDTIRACVESGVPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
           S ENPV+YVQYA+AR  S+F Q           L   ++      E     + L+  +A 
Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLAAVAGPEASPQAVALVQRIAA 526

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P V+ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ 
Sbjct: 527 FPDVLADAARELAPHAVAFYLRDLAGDFHTFYNADR-------VLVDDDAVKRARLALLA 579

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL +IGV +P +M
Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600


>gi|317485261|ref|ZP_07944142.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923552|gb|EFV44757.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 551

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 205/579 (35%), Positives = 322/579 (55%), Gaps = 32/579 (5%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              L+   + +   + +     D+ VIE  +D  HG L++N A++ ++  G+ P  +A  
Sbjct: 4   EQHLEASFRAVLKNMNLP--WPDKAVIEPSKDPKHGDLASNLALVSAKAAGMPPRELAAK 61

Query: 68  IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +   +   D  + SV +AG GF+N+  SP + R+ +  I  +   +G+  +GKG KV +E
Sbjct: 62  MAEALRNEDASLASVEVAGPGFLNVTFSPEFWRETIRRIDDAADRFGQATVGKGCKVQVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A VGDTLA ++ F+GY+VT EYYINDAG Q+  L LS++ R +
Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDTLARILRFAGYDVTTEYYINDAGRQMRLLGLSIWLRAK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L     + PE YY G Y+  + +E+ DK    L +  + +       Y +Q ++  I+
Sbjct: 182 E-LAGIAVEWPEDYYRGSYIIDIAREMMDK-DPGLTSLSDAEGQDRCFAYGMQTILDGIK 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +DL+   ++H ++ SE      +   + +  + L + G  +E                  
Sbjct: 240 EDLREFRVEHQVWFSERSLV--ERGAVEETFERLKKAGLSFE----------------KD 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L FR+T  GDD DR L KSDGS TYFA+D+AY   KY RGFD ++ V G+DH GYV R
Sbjct: 282 GALWFRTTDFGDDKDRVLRKSDGSLTYFASDIAYHDDKYRRGFDRVVDVWGADHHGYVPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   AV  K   ++V+L +LV L  +G  + MS RAG F TL  VV EVG D+ RFM 
Sbjct: 342 MKAAVQAVGRKAEDLDVVLIQLVNLLENGTQVAMSTRAGQFETLADVVKEVGVDAARFMF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   VK++S +NPV+YVQYA+AR RS+ R+A +    L       ++  
Sbjct: 402 LSRKSDSHLDFDLALVKQRSMDNPVYYVQYAHARVRSVLRKAAEAGLTLPE---KTDLAL 458

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                +  +L L+  L  +  V + A  A  P+ +++YL +LA + H +++         
Sbjct: 459 LAPLSEAEDLALLHFLDRFEDVAKGAAQALAPHHISYYLMELAGMLHSYYAKH------P 512

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +QA + +L + RL L+ +V  ++ +GL ++GV +P  M
Sbjct: 513 VLQAGDPELALARLALLRSVGQVVKNGLELLGVSAPESM 551


>gi|257455955|ref|ZP_05621172.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257446701|gb|EEV21727.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 605

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 193/622 (31%), Positives = 307/622 (49%), Gaps = 67/622 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L   ++ +  +  +    +D   I R +D AHG  ++N AMI ++    +P  +A+
Sbjct: 8   ISQALALVVESLKQQQILPIDWVDNSTISRTKDQAHGDFASNLAMIAAKTAKKNPRELAQ 67

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IVA +     +  V IAG GFIN +L  +    IL +I+    ++G +    G K+ +E
Sbjct: 68  TIVAMLPASDMISKVEIAGPGFINFFLDDNARFAILDTIMQQKGDFGTSEEFAGKKIQVE 127

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPT  +HVGH R A  G ++A+L+   GY+V REYY+NDAG Q++ LA S + RY 
Sbjct: 128 FVSANPTSSLHVGHGRGAAFGMSVANLLEAVGYQVGREYYVNDAGRQMDILATSTYLRYL 187

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL---------------- 230
           + L       P   Y G Y+K + K +  ++   L    E   L                
Sbjct: 188 E-LCGEPIVFPTNAYQGDYVKDIAKPIKKQHGDSLKTAWEHMLLNVPADAEYQIDANGEK 246

Query: 231 --------------------------PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                                      I  + ++  ++  I+DDL   N+  D + SE  
Sbjct: 247 VCVSGDKEAHIDGLIANAKANLGDNYQIFHEAALSTILADIQDDLADFNVHFDQWFSEKS 306

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                   I   ++ L ++G++Y+                    L F+ST  GD+ DR +
Sbjct: 307 IQ----DAIVPALELLEQRGFLYQ----------------KDGNLWFKSTEFGDEKDRVV 346

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +++G +TYFA+D+AY K K +RG+D +I V GSDH GY+KR++A   A+     +++V+
Sbjct: 347 RRANGQFTYFASDIAYHKDKLDRGYDKIIDVWGSDHHGYIKRVKAALTAMGYDAQRMDVI 406

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L+R    I+MS R+G F+TLR +  EVG+D+ RF  + RK  + +DFD    K 
Sbjct: 407 LVQFVTLWRGTEQIQMSSRSGQFVTLRELRQEVGNDAARFYYVARKPEQHIDFDLELAKS 466

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            +K+N V+Y+QYA+AR   +  + ++    +D          Q       E  L+  LA 
Sbjct: 467 HTKDNAVYYIQYAHARICRVLERTEERGIKVD---DKAGKAHQHRLTQPVETDLLSLLAS 523

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR-KLTMMRLQLV 563
           YP V+  A +  EP+ L  YL DLAS+FHG ++  R  P+       +   L   RL+L 
Sbjct: 524 YPEVLRRAAVNYEPHLLTNYLKDLASLFHGWYNDNRILPKDGETPTQDELDLMQARLRLS 583

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            +V  +I +GL ++G+ +P  M
Sbjct: 584 KSVRQVIQNGLILLGLTAPTSM 605


>gi|323356884|ref|YP_004223280.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273255|dbj|BAJ73400.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 554

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 189/576 (32%), Positives = 295/576 (51%), Gaps = 35/576 (6%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +   L E   +          + +ERP++  HG  ++NAAM L++ +G +P   A  I A
Sbjct: 13  VIAPLAEARREGSSAGLSAADLPLERPKNRDHGDWASNAAMKLAKVVGANPREFAAEIAA 72

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            ++    + SV +AG GFIN+ L  +    +   IV  G  +G N       +N+EFVSA
Sbjct: 73  GLESVDGIASVEVAGPGFINIRLDAAAAGALAKVIVEQGEAFGTNDSRADEVINLEFVSA 132

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+G  R A +GD LA +++  G +VTREYY ND GAQI+  A S+   +Q    
Sbjct: 133 NPTGPIHLGGTRWAALGDALARILSAQGAQVTREYYFNDHGAQIDRFARSLVAAHQ---- 188

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                 PE  Y G Y+  + K +A+ Y  ++     +      ++  V  M   I+  L 
Sbjct: 189 --GDPTPEDGYGGAYIGDIAKRVAEAYDGDVDALDADAKQEAFRELGVNFMFDEIKQSLH 246

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  D++  E+D H  +   +   +  L   G+++E                      
Sbjct: 247 EFGVDFDVYFHENDLH--NSGAVERAVARLRELGHIFEA----------------DGATW 288

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            RST  GDD DR ++KSDG   Y + DLAY+  K ERGF+  I ++G+DH GYV+RL A+
Sbjct: 289 LRSTEFGDDKDRVIIKSDGQPAYISGDLAYYLDKRERGFNRCIIMLGADHHGYVQRLMAM 348

Query: 371 AAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            AA  ++    + VL+ ++V L RDG P++MSKRAG  +TL  +V+ VG D+ R+ +   
Sbjct: 349 CAAFGDEPNVNLQVLIGQMVNLVRDGQPMRMSKRAGTVVTLEDLVEIVGVDAARYALTRS 408

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LD D   +++++ +NPVFYVQYA+AR  ++ R A     D       R+    E 
Sbjct: 409 SADSNLDIDLDVLQKRTNDNPVFYVQYAHARTHNVARNAAASGVD-------RSEFAPEL 461

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               SE  L+  L EYPR++ +A   +EP+++A YL +LA ++H  + + R  P      
Sbjct: 462 LDHESESALLGALQEYPRIVAHAADVREPHRVARYLEELAGLYHRWYDNCRVIPLS---D 518

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A    +   RL L  A   ++ +GL ++GV +P  M
Sbjct: 519 APVETVHRTRLWLNDATGQVLRNGLTLLGVSAPERM 554


>gi|303248045|ref|ZP_07334311.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490602|gb|EFL50507.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 552

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 209/582 (35%), Positives = 323/582 (55%), Gaps = 39/582 (6%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             L+  L+E   K  +      +  IE PRD +HG L+TN AM+ ++   + P  +A  +
Sbjct: 5   EHLRGLLEEALQKRGI--AWPAKTTIEAPRDKSHGDLATNVAMMATKAAKMPPRQLAGEL 62

Query: 69  VARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
              +    PD+  V +AG GFIN+  +P + ++ +  +  SG  YGR  IG+GT++ +EF
Sbjct: 63  REELLAASPDLADVAVAGPGFINVTFTPGFWQRTVLDVAGSGDRYGRLNIGEGTRIQVEF 122

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+H+GH R A VGD+LA ++  +G+ V  EYYINDAG Q+  L  S+ +R ++
Sbjct: 123 VSANPTGPLHIGHGRGAAVGDSLARVLRAAGFAVETEYYINDAGRQMRILGQSILYRCRE 182

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L   D   PE YY G Y+K + +EL D+    LL+ PE+K   I + Y  + ++  I+ 
Sbjct: 183 -LAGKDVTEPEDYYRGDYVKELARELLDREGEGLLDLPEDKATDICRLYGEKEILDGIKK 241

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL+   + HD++  E          +    D+L  +   Y+                   
Sbjct: 242 DLREFRVGHDVWFPESKLFA--AGAVARTFDDLRAKNLAYD----------------KDG 283

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L F +T  GDD DR L+KS G  TYFA+D+AY   K+ RGFD ++ + G+DH GYV R+
Sbjct: 284 ALWFATTNFGDDKDRVLVKSGGDLTYFASDIAYHDDKFRRGFDVVVDIWGADHHGYVPRM 343

Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           +A  AA+       + V+L +LV L + G  I MS RAG F TL  VV EVG+D+ RFM 
Sbjct: 344 KACVAALGRDPETSLKVILVQLVNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMF 403

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP---DLDFDLFPRN 483
           L RK+   LDFD   VKE+S +NPV+YVQYA+AR +S+F +A +      +   +L  + 
Sbjct: 404 LSRKSDSHLDFDLDAVKEKSMDNPVYYVQYAHARVKSLFAKAAERGVTPREATPELLSKL 463

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
             P++ E             +YP  + +A     P+ ++FYL DLA   H +++      
Sbjct: 464 DTPEDLELLKLLE-------QYPDTVASAARTFAPHLVSFYLRDLAGQLHRYYT------ 510

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + + + +LT+ RL L+ AVA+++ +GL+++GV +P++M
Sbjct: 511 VNPVLASGDAELTVARLALLDAVATVVRNGLDLLGVSAPDKM 552


>gi|33591373|ref|NP_879017.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33571015|emb|CAE40495.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332380774|gb|AEE65621.1| arginyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 595

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 184/589 (31%), Positives = 302/589 (51%), Gaps = 49/589 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +L + ++    +   E +   ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV
Sbjct: 43  QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 100

Query: 70  ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   P     +    IAG GFIN  L+P+  + ++ ++      YGR     G KV +
Sbjct: 101 DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 159

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A +GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R 
Sbjct: 160 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 218

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239
            + +  +  D P   Y G Y+  + ++ A +          +    +   L  ++ ++V 
Sbjct: 219 GRGIAPDAPDYPADGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 278

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +    DL+A  +  D +  E   +      +++ +D L  +G+ YE           
Sbjct: 279 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 325

Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF + + + G
Sbjct: 326 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 380

Query: 358 SDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SDH G V R+ A    +    K     +L ++V++ R G  +K+SKRAG ++T+R ++D 
Sbjct: 381 SDHHGTVARVRAGLQGLAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDW 440

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  ++   +     ++ 
Sbjct: 441 VGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI- 499

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                            SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  +
Sbjct: 500 ------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWY 553

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  R       V  +   L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 554 NAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 595


>gi|306835846|ref|ZP_07468842.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568263|gb|EFM43832.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 550

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 185/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+  +  ++  +L D   +ERPR+  HG  +TN A+ +++  G +P  
Sbjct: 4   ADLATLVKESATEVMAEHDLDASVLPDTATVERPRNPEHGDYATNLALQVAKKAGANPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
               +  ++     +    IAG GFIN+ L+ +   +I++ I+ +G +YG N    G K+
Sbjct: 64  FGGWLAEKLAEHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   + +K  S  L     +     +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGDYIHDIASAVVEKNPSA-LEGDAAQVQEAFRADGVEMMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L    +  D++  E+     +   +   ++ L  +G++YE               
Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   +ST  GD  DR ++KSDG+  Y A D+AY   K++RG D  IY++G+DH GY
Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L RDG P++MSKRAG  IT+  +V  +G D+ R
Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGIDASR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     + +D D    + QS +NPV+YVQY +AR  SI R+A ++   +  +    +
Sbjct: 399 YSLVRSSADQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VSSEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  E E D     LI  L E+P V+ +A   +EP+++A Y  +LA VFH  +   +  P
Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        + +   RL L  A   ++++ L ++GV SP +M
Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550


>gi|326771976|ref|ZP_08231261.1| arginine--tRNA ligase [Actinomyces viscosus C505]
 gi|326638109|gb|EGE39010.1| arginine--tRNA ligase [Actinomyces viscosus C505]
          Length = 561

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 192/587 (32%), Positives = 310/587 (52%), Gaps = 37/587 (6%)

Query: 6   DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           + ++ ++  L+E   +    +    +    +ERPR+  HG  STN AM L++  G  P  
Sbjct: 5   ELAAAIRTVLEEASAEGSLALPAAEIPDPRVERPRNRDHGDWSTNVAMQLAKKAGTKPRD 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AEL+V R++    + SV +AG GF+N+ L  +   ++  SIV +G  YGRN    G  +
Sbjct: 65  LAELLVPRLEALDGIASVEVAGPGFLNIRLDAASAGELARSIVEAGEAYGRNDSLSGQHI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+E+VSANPTGP+H+G  R A VGD+LA +++  G +VTREYY ND G QI+  A S+  
Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGAQVTREYYFNDHGTQIDRFARSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239
             +        + PE  Y G Y+  + +++ AD+ ++   +    P+ +   + +   V 
Sbjct: 185 SAR------GQETPEDGYGGAYISEIAQQVTADELAAGRPDPATLPDAEATEVFRSRGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   ++ +L A     D+F  ED  H      +   I  L  +G +             
Sbjct: 239 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAIARLRERGVI------------- 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +        R+T  GDD DR L+KSDG+  YFAADLAY+  K ERG D  IY++G+D
Sbjct: 284 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGADCAIYLLGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H GY+ R+ A+ AA  +     + +L+ +LV L R+G+P++MSKRAG  +TL  +VD VG
Sbjct: 341 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTIVTLEDLVDAVG 400

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +       ++D D   +   + +NPV+YVQYA+AR R++ R A +     D +
Sbjct: 401 VDAARYALARSSMDSMIDIDLDLLTSSTSDNPVYYVQYAHARTRNVARNAAEHGVSRDPN 460

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             P      +   D ++  L+  LA++P  +  A   +E +++A YL  LA+ +H  +  
Sbjct: 461 EAPFEPGALD---DPADTALLGVLAQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGA 517

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  PR      +     + RL L  AV  ++ +GL+++GV +P  M
Sbjct: 518 TRVTPRGDDAVDSG---HVARLWLNDAVGQVLANGLDLLGVSAPERM 561


>gi|148272330|ref|YP_001221891.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830260|emb|CAN01194.1| argS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 554

 Score =  541 bits (1395), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/558 (34%), Positives = 294/558 (52%), Gaps = 35/558 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
            D +V+ERPR+  HG  +TN AM +++PLG DP TIA  I   +   P V  V +AG GF
Sbjct: 31  PDMVVLERPRNRDHGDWATNIAMRIAKPLGEDPRTIAADIAEALGELPQVAKVDVAGPGF 90

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN+ L  +    +  +IV +G  YGR     G ++N+EFVSANPTGP+H+G  R A VGD
Sbjct: 91  INITLEAAAAGALARTIVDAGPAYGRGHTLDGIRINLEFVSANPTGPIHLGGVRWAAVGD 150

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +LA ++   G +VTREYY ND G+QI+  A S+   +         D PE  Y G Y+  
Sbjct: 151 SLARILQAEGADVTREYYFNDHGSQIDRFARSLLASHL------GEDTPEDGYGGAYIGE 204

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + + +   Y  +L   P E+   + +    + M   I+  L    +  D+F  ED  H  
Sbjct: 205 IAERVVAGYDGDLDALPREEQQEVFRSAGTELMFGEIKQKLHDFGVDFDVFFHEDSLH-- 262

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   +   +  L   G+V+E                +   +  R+T  GDD DR +++S 
Sbjct: 263 ESGAVDRAVARLKELGHVFE----------------EDGAVWLRTTTFGDDRDRVVIRST 306

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCE 387
           G   Y + DL Y+  K ERGF+  I ++G+DH GYV R+ A+A A  +     + +L+ +
Sbjct: 307 GEPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMAEAFGDTPGVNLQILIGQ 366

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V L RDG P+KMSKRAG  +TL  +VD VG D+ R+ ++     + LD D   + +++ 
Sbjct: 367 MVNLLRDGEPVKMSKRAGTIVTLDDLVDAVGVDAGRYSLVRSSADQNLDIDLAVLGKRTN 426

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR  ++ R A     D       R+    E     +E  L+  L E+PR
Sbjct: 427 DNPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPR 479

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++  A   +EP+++A Y+ +LA  +H  +   R  PR          L   RL L  AV 
Sbjct: 480 IVAQAAELREPHRVARYIEELAGSYHRWYDSCRVVPRG---DEEVTDLHRTRLWLNDAVR 536

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL+++GV +P  M
Sbjct: 537 QVVANGLDLVGVSAPERM 554


>gi|227495013|ref|ZP_03925329.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831465|gb|EEH63848.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 559

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/587 (32%), Positives = 305/587 (51%), Gaps = 41/587 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           D    +   L E     +V   + +I   IV+ERPR+  HG  +TN AM L++  G++P 
Sbjct: 5   DLEQLIHTVLTEAVAAGEVNLTDDQIPADIVVERPRNREHGDWATNIAMRLAKAAGMNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  I  R+     ++ V +AG GFIN+ L  +   ++  +I+ +   YG N    G  
Sbjct: 65  ELAVNIAFRLAEKEGIEKVDVAGPGFINITLDAATAGELARTILTAKESYGTNQSQTGKH 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGDTLA L+  SG +VTREYY ND GAQI+  A S+ 
Sbjct: 125 VNLEFVSANPTGPIHLGGARWAAVGDTLARLLEASGAKVTREYYFNDHGAQIDRFARSLV 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPEEKWLPIVKDYSV 238
            R +        + PE  Y G Y++ +  ++            +  PE +     +   V
Sbjct: 185 ARAK------GEEAPEDGYGGQYIEDIANQVMADAQEAGEPNPVTLPEAEATEAFRARGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I+  L   +++ D++  ED  H      + + I+ L  +G +YE          
Sbjct: 239 ELMFAEIKKKLAEFHVEFDVYFHEDHLHT--TGAVAEAIEKLRDRGVIYEA--------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        RST  GDD DR ++KSDG   YFA D+AY+  K ERG D ++ ++G+
Sbjct: 288 -------EGATWLRSTDFGDDKDRVIIKSDGDAAYFAGDIAYYLNKRERGADQVVIMLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  +K    + +L+ +LV L  +G P++MSKRAG  +TL  +V+ V
Sbjct: 341 DHHGYIGRMYAMCAAFGDKPGDNLELLIGQLVNLLSNGEPLRMSKRAGTIVTLDDLVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++     + +D D   +   S +NPV+YVQYA+AR  ++ R A +    +D 
Sbjct: 401 GVDAARYALVRSSIDQAIDIDLDLLASHSNDNPVYYVQYAHARTCNVSRNAAEHGVSMDA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P      E+    ++ QL+  LA++P ++  A   +EP+++A YL  LA+ +H  + 
Sbjct: 461 GFAP------EALDHAADAQLLGALAQFPAMVAQAAELREPHRVARYLESLAASYHTWYG 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             R  PR   +        + RL L  AV  ++ +GL ++GV +P  
Sbjct: 515 QCRVTPRADELVETG---HVARLWLNEAVKQVLANGLALLGVSAPER 558


>gi|160934061|ref|ZP_02081448.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753]
 gi|156866734|gb|EDO60106.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753]
          Length = 563

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 191/582 (32%), Positives = 306/582 (52%), Gaps = 31/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    + + L     +  +  +      IE P D +HG  +TN AM+ ++   + P  IA
Sbjct: 11  DLRQIILDALGRAVAEKALPMEPAPDFTIETPADPSHGDFATNVAMVSAKAFHMAPRKIA 70

Query: 66  ELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +    +      +   IAG GFIN +LSP +   +L  I      YGR+  GKG K+N
Sbjct: 71  EALSPYFEFSSTYFEKFEIAGPGFINFFLSPRFYAAVLQDIEALQDGYGRSDFGKGKKIN 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD LA+++  +GY+V+RE+YINDAG QI+  ALS+  R
Sbjct: 131 VEFVSANPTGPMHMGNARGGALGDCLAAVLDAAGYQVSREFYINDAGNQIDKFALSLDIR 190

Query: 185 YQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           YQQ     ++  +PE  Y G  +    +E AD Y    L   +E+    + D+++   + 
Sbjct: 191 YQQIFKGEEAVPMPEDCYQGADILERAQEFADLYGDSCLEKSQEERQKALVDFALPKNIA 250

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            ++ DLK   I++D +  E   H  +   I+D +  L  +G  YE               
Sbjct: 251 KMQSDLKKYRIEYDTWFHESVLH--NDGEIQDTLKILMEKGMTYEL-------------- 294

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                L +++T  G + D  L++ +G+ TYFAAD+AY + K++RGFD  I + G+DH G+
Sbjct: 295 --DGALWYKATDFGAEKDEVLVRKNGNPTYFAADIAYHRNKFQRGFDRCIDIWGADHHGH 352

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R++    AV    ++++V+L +LV+L R+G  ++MSKR G  I L  ++DEV  D+ R
Sbjct: 353 VARMKGAMNAVGLDGSKLDVVLMQLVKLVRNGEIVRMSKRTGKAIQLADLLDEVPVDAAR 412

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F+   R+ +  ++FD     +Q  +NPV+YVQYA+AR  SI  +A +    +        
Sbjct: 413 FLFNMREANSQMEFDLDLAVQQDAQNPVYYVQYAHARICSIL-KALEKDGVVKRACSEEE 471

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++         EL LI HLA Y   + +A    +P ++  Y+ DLA++FH  ++  R   
Sbjct: 472 LLL---LVQPEELSLIRHLAAYTGEVVSAAKDYDPARITRYVIDLANLFHKFYNACR--- 525

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V+     L   RL L  AV ++I++ L +  + +P  M
Sbjct: 526 ----VKGEEDSLCQARLTLCVAVKTVIHNVLTMFKISAPESM 563


>gi|225017221|ref|ZP_03706413.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum
           DSM 5476]
 gi|224949996|gb|EEG31205.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum
           DSM 5476]
          Length = 562

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 203/586 (34%), Positives = 321/586 (54%), Gaps = 42/586 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L    +    K  + +  L    IE P D +HG  + N AM+ +R   L P  IAE
Sbjct: 12  LRELLTAAAQGAMEKGLLPQAELPAFTIEIPADSSHGDFAANLAMVSARAFKLAPRKIAE 71

Query: 67  LIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++   + ++    D   IAG GFIN +L+ S+   ++ ++V  G +YGR+  G G KV +
Sbjct: 72  ILCGELNLNGTFFDRWEIAGPGFINFFLNQSWFGSVVEAVVQEGADYGRSEFGGGKKVMV 131

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+VT+E+YINDAG QI   ALS+  RY
Sbjct: 132 EFVSANPTGPMHIGNARGGAMGDCLASVLDWAGYDVTKEFYINDAGNQIEKFALSLDVRY 191

Query: 186 QQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           QQ     D+  LPE  Y G  +K   +  AD Y  + L+  +++    + DY++   +  
Sbjct: 192 QQIYKGEDAVPLPEDAYQGADIKVHAQNFADLYGDKFLDATQQERRKALVDYALPINIAN 251

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           ++ DL    I++D++  E   H  +   ++ I+D L  +G  YE                
Sbjct: 252 LKTDLAKYRIEYDVWFKESVLH--EEGQVQKIVDILTERGLTYE---------------- 293

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
               + ++S+  G + D  L++++G  TYFAAD+AY   K+  RGFD +I + G+DH G+
Sbjct: 294 KEGAIWYKSSEYGSEKDDVLVRANGIPTYFAADIAYHYNKFAVRGFDRVINIWGADHHGH 353

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+    AV    ++++V+L ++VRL RDG P+K+SKR+G  ITL  ++DEV  D+ R
Sbjct: 354 VARLKGAMDAVGLDGSKLDVVLMQMVRLMRDGEPVKVSKRSGKSITLVSLLDEVPIDAAR 413

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF----PDLDFDL 479
           F+   R+ +  LDFD     EQS +NPV+YVQYA+AR  SI ++          D DF L
Sbjct: 414 FIFNLREANSHLDFDLDLAVEQSSQNPVYYVQYAHARICSILKKLAQEGFSPQEDADFGL 473

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E++LI H+A  P  I  A  A +P ++  Y  DLA++FH  ++  
Sbjct: 474 LTA----------PEEIELIRHIARLPGDIVEAAKAYDPARITRYSLDLATLFHKFYNAC 523

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V+ ++ +LT  RL L  AV +++ + L+++ +++P  M
Sbjct: 524 K-------VKGDDERLTTARLTLCDAVRTVLENVLSMLKIDAPESM 562


>gi|315604827|ref|ZP_07879886.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313498|gb|EFU61556.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 559

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/588 (32%), Positives = 308/588 (52%), Gaps = 41/588 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + +  +++ L +     ++      + D + +ERPR   HG  +TN AM L +  G+ P 
Sbjct: 5   ELACLIRSTLLDAAAAGRISIDPALVPDPVTVERPRIREHGDWATNVAMQLGKKAGMAPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A+++   +    D+DSV +AG GFIN+ L      ++  +IV +G  YGRN    G  
Sbjct: 65  DFAQILAEDLSGAEDIDSVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLAGRS 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA LMA SG  VTREYY ND G+QI+  + S++
Sbjct: 125 INLEYVSANPTGPVHLGSVRWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDHFSHSLY 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238
            R          ++PE  Y G Y+  + +++     +    + +  PEE+ + + +   V
Sbjct: 185 ARAM------GREVPEDGYGGQYIADIAEQVRADARAAGEPDPITLPEEEAIEVFRARGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I++ L +  +  D+F  ED  H      + D I  L  +G +++          
Sbjct: 239 ELMFAEIKERLHSFRVDFDVFFHEDSLH--SSGAVADAIARLRERGEIFD---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +   +  R+T  GDD DR L+KSDG   YFA D+AY+  K ERG D  IY++G+
Sbjct: 287 ------EGGAVWLRTTTYGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADAAIYLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  +K    + +L+ +LV L +DG P++MSKRAG  +TL  +VD V
Sbjct: 341 DHHGYIGRMMAMCAAFGDKPGVNLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       +D D   + + S +NPV+YVQYA+ R  ++ R A       D 
Sbjct: 401 GVDAARYALVRVSMDTQVDIDLDLLSQHSNDNPVYYVQYAHVRTCNVARNAAAHGVSRDA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +  +          L+  LA++P  +  AT  +EP+++A YL  LA+ +H  + 
Sbjct: 461 GFDPAALDTEADS------ALLGALAQFPAQVAQATELREPHRIARYLESLAATYHAWYG 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  PR            + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 515 QCRVTPRS---DDPVEAGHVARLWLNDAVTQVLRTGLGLLGVSAPERM 559


>gi|303233374|ref|ZP_07320043.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480503|gb|EFL43594.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 615

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 191/629 (30%), Positives = 305/629 (48%), Gaps = 68/629 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + +   +K       + +  +    +ERP D +HG  S+  AM  +R   + P  IA+
Sbjct: 5   LENLVLQAIKNAQAANVLPEFEVSDCGLERPADTSHGDWSSTIAMRSARLAHMAPAKIAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +    ++  V IAG GFIN YLS S    +++++  +   +G   +GKG K+N E
Sbjct: 65  AIVDHMPETTEIAKVEIAGPGFINFYLSTSASNDVINAVRSARDRWGACNMGKGFKINYE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F+SANPTGP+HVGH R A +GD++ +++ F GY+V REYYIND G+Q++    SV  RY 
Sbjct: 125 FISANPTGPLHVGHGRWAALGDSVCNVLDFCGYDVFREYYINDHGSQMDVFGSSVSMRYA 184

Query: 187 QALY-------------------------NNDSDLPEGY--------------YPGVYLK 207
           Q                            + + + PE +              Y G Y+ 
Sbjct: 185 QLCSIIADKHLSAKQALELLLADRNAYVDDEEDEHPENHPYMDAFNEHLGGNSYGGDYII 244

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  E   +         E++     ++ + QAM+K I++         D++ SE   ++
Sbjct: 245 EIAYEFYVQDGDSWAQVSEDERNAAFRERAYQAMLKRIQNTCHTSRCDFDLWFSERSLYQ 304

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            D    S +      L + GY+Y+                D   L F+ST  GDD DR L
Sbjct: 305 KDESGTSKVDRAFARLEKMGYLYK---------------TDDGALWFKSTEFGDDKDRVL 349

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KS+G YTYFA+D+AY   K++RG    I + G+DH GY+ R+  V  A+   K +  V 
Sbjct: 350 IKSNGEYTYFASDVAYHWDKFDRGAQQSIDLWGADHHGYIARVTNVCDALGF-KGKFIVD 408

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L R+G P++MSKR G  IT   ++ EVG D+ R+ ++ + +++ +DFD   VKE
Sbjct: 409 LGQFVNLLRNGEPVRMSKRKGTMITFEELLHEVGVDATRYTLISKSSNQTIDFDIEAVKE 468

Query: 445 QSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPR----NVIPQESEFDTSEL 496
           +S  NPVFYVQYA+AR  SI R A    ++    L  D        N +         E 
Sbjct: 469 KSNSNPVFYVQYAHARICSILRNAAGVTEEEAKTLGMDEVAARAVGNDVDLSLLVHPMEA 528

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L   L+E+P ++ +    + P+++  ++ +LA  FHG +++ +        +  +  L+
Sbjct: 529 ALSRKLSEFPELVASCARDRAPFRITHFVEELAGAFHGFYANCQVLSSEG--RPVDEALS 586

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL    AV   +   L +IGV +P  M
Sbjct: 587 HARLAACDAVRINLEVALKLIGVSAPEVM 615


>gi|290967899|ref|ZP_06559449.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782038|gb|EFD94616.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 554

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 208/585 (35%), Positives = 311/585 (53%), Gaps = 31/585 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  + +     K+ +     IV+E P     G  +TN AM  +R     
Sbjct: 1   MDIKEAVIQGIRTAMDKAVAAGKLPEGDYPDIVLEIPPQKEFGDFATNIAMQSARTAHCA 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  +K  P +D   +AG GFIN++L      ++L  I+     YG       
Sbjct: 61  PRHIAESIVEELKA-PWLDKAEVAGAGFINIFLDSRVFYQVLQHILTVQEAYGTCAERPE 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +EFVSANPTGP+HVGH R A  G +L +L+  +GY+V  EYYINDAG Q++ LA S
Sbjct: 120 DTVQVEFVSANPTGPLHVGHGRGAAYGSSLVNLLRMAGYKVEAEYYINDAGKQMDNLAAS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY + L+   +++PE  Y G  +    K +A +     L   E + L I KD + + 
Sbjct: 180 VNARYLE-LFGRKAEIPENGYHGQDIIDTAKAIAAQDGDRYLQVSEAERLAIFKDRAYEE 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K ++ DL   ++Q+D + SE   H   P  IR   D L  +G VYE            
Sbjct: 239 KLKALQKDLARFHVQYDHWFSERTLH---PQGIRQACDALRERGKVYE------------ 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  +ST  GDD DR +++ +G  TY AAD+AY K KY+R F  MI + G+DH
Sbjct: 284 ----KDGALWLQSTAYGDDKDRVVIRENGDPTYLAADIAYHKNKYDRHFKTMINIWGADH 339

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYV R+ A  AA+     ++ VLL ++V L+RDG P+KMSKR G  ITL  +++EVG+D
Sbjct: 340 HGYVARVRAAMAALGYDTKRLEVLLLQMVSLFRDGKPVKMSKRTGQAITLNELIEEVGTD 399

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + R+  + R     LDFD       S ENPV+Y+QYA+AR  SI+RQA++    L     
Sbjct: 400 AARYFFIMRSLDTQLDFDLDLAMSHSNENPVYYIQYAHARIYSIYRQAEEAGIALPQ--- 456

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               +  +   + +EL LI  +A +P  I+ A  A+ P+++A ++Y+ A +FH  ++H R
Sbjct: 457 RWEAVQWDLLQEEAELALIKKMAAFPEEIQRAAAARAPHRIAHFVYETAGLFHAFYNHCR 516

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +   +R+L + RL LV AV   I + L ++G+ +P +M
Sbjct: 517 -------IIQEDRELAIARLGLVTAVRFTIANSLAVLGISAPQQM 554


>gi|25027832|ref|NP_737886.1| arginyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259506223|ref|ZP_05749125.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|38372529|sp|Q8FQ57|SYR_COREF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|23493115|dbj|BAC18086.1| putative arginyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259166200|gb|EEW50754.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 550

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 304/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+     ++  +L ++IV+ERPR+  HG  +TN A+ +++ +G+ P  
Sbjct: 4   ADLATLIKQTAVEVLTSRDLDASMLPEQIVVERPRNPEHGDYATNVALQVAKKVGVTPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +  D  +DS  IAG GFIN+ L+ +   +I++ I+  G ++G +       V
Sbjct: 64  LGTWLAEALAADDSIDSAEIAGPGFINIRLAAAAQGEIVAKILEQGEKFGTSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  +G +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ + + +  K+   L   PEE    + +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGEYIREIAEAIVAKHPDALDRTPEE-TQELFRSEGVEMMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            IR+ L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIRESLHEFGTDFDVYFHENSLF--ESGAVDRAVQKLKDNGNLYES-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY + K+ERG +  IY++G+DH GY
Sbjct: 281 --DGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVQDKFERGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+      + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYAPEGVEVLIGQMVNLLRDGTAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A D+   + ++    +
Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAADLG--VTYEDADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P VI  A   +EP+++A Y  +LA  FH  +   +  P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVIRAAADLREPHRIARYAEELAGTFHRFYDSCQILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +   RL L  A    + + L ++GV +P +M
Sbjct: 512 K---ADEEKAPIHAARLALAAATRQTLANALALVGVSAPEKM 550


>gi|239906966|ref|YP_002953707.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511642|sp|C4XSX9|SYR_DESMR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|239796832|dbj|BAH75821.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 551

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 205/587 (34%), Positives = 316/587 (53%), Gaps = 50/587 (8%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           + L++ L        +   +  +  IE PRD AHG L+TN AM+ S+     P  +AE +
Sbjct: 5   AILRDLLASALENQGIAWPV--KTTIEPPRDKAHGDLATNVAMMASKAAKKPPRELAESL 62

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +  DP + SV +AG GF+N+  +P++ ++ +  +  +G  YG   IG+G K+ +EFV
Sbjct: 63  RQALAADPRLASVEVAGPGFLNVAFTPAFWQETVCDVAKAGDGYGLLDIGQGVKIQVEFV 122

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+H+GH R A VGD+LA ++  +G+ V  EYYINDAG Q+  L +S+ +RY++ 
Sbjct: 123 SANPTGPLHIGHGRGAAVGDSLARVLRAAGFTVETEYYINDAGRQMRILGMSILYRYKEL 182

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +       PE YY G Y+  + +++ D +  +LL  PE +   I + +  + ++  I+ D
Sbjct: 183 I-GEPVTEPEDYYRGEYVIPLAQDMIDAHGRKLLEMPEAEATDICRLHGEREILAGIKKD 241

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L+   + HD++  E          +    + L  +   Y+                    
Sbjct: 242 LEDFRVHHDVWFPESTLLA--AGAVDAAFNELRDKKLAYD----------------QDGA 283

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
             F ST  GDD DR L+KS G  TYFA+D+AY   K+ RGFD ++ + G+DH GYV R++
Sbjct: 284 FWFASTAFGDDKDRVLVKSGGELTYFASDIAYHADKFRRGFDVVVDIWGADHHGYVPRMK 343

Query: 369 AVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           A  +A+     A + V+L +LV L + G  I MS RAG F TL  VV EVG+DS RFM L
Sbjct: 344 ACVSALGRDPEASLKVILVQLVNLLKGGEQIAMSTRAGKFETLADVVKEVGADSARFMFL 403

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            RK+   LDFD   VKE+S +NPV+YVQYA+AR RS+F +A++    +            
Sbjct: 404 SRKSDSHLDFDLDAVKEKSMDNPVYYVQYAHARVRSLFAKAQERGQAV------------ 451

Query: 488 ESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            +E     L L+           L +YP  +  A     P+ ++FYL DLA   H +++ 
Sbjct: 452 -AETSPELLALLTTDEDLELLKLLEQYPDTVAAAARTFSPHLVSFYLRDLAGRLHRYYT- 509

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A +  L   RL+L+ AVA  I +GL+++GV +P++M
Sbjct: 510 -----VNPVLTAGSDDLASARLRLLDAVAQTIKNGLDLLGVSAPDKM 551


>gi|78049585|ref|YP_365760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038015|emb|CAJ25760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 569

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 194/592 (32%), Positives = 309/592 (52%), Gaps = 37/592 (6%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +
Sbjct: 7   HVKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 66

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +VA +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G
Sbjct: 67  PRALAQALVAALPASDDVAKVDIAGPGFINFHLAPTAYQRQVAHVIKQGHDYGRGLAGNG 126

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALS
Sbjct: 127 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 186

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235
           V  R  Q L  +    PE  Y G Y+  V          D     +    +   L  ++ 
Sbjct: 187 VQAR-AQGLTPDSDGWPENGYRGDYIADVASAYLAGDTVDLEGHLVTGTKDPADLESIRR 245

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE       
Sbjct: 246 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 296

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                    +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  
Sbjct: 297 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 347

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR +
Sbjct: 348 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDL 407

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++   
Sbjct: 408 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 467

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH
Sbjct: 468 KYDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFH 524

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 525 TWYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 569


>gi|332654228|ref|ZP_08419972.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517314|gb|EGJ46919.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 582

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 187/587 (31%), Positives = 307/587 (52%), Gaps = 20/587 (3%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A  +   +   ++      + +    +  IE P+D AHG  +++ AM  ++ L   P  I
Sbjct: 10  AQVAQLTQQAYEKAAQAGLLPEGAQVKATIEIPKDTAHGDYASSFAMAGAKALHKAPRAI 69

Query: 65  AELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           A+ IV  ++++      V IAG GF+N  L P +  ++LS++   G EYG N  G G KV
Sbjct: 70  AQAIVDNLELEGSYFQKVEIAGPGFLNFTLGPKWYGEVLSAVEQEGAEYGANTEGNGEKV 129

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGPMH+G+ R  V+GDTLA+++   G    +E+Y+NDAG QI+  A+S+  
Sbjct: 130 MVEFVSANPTGPMHMGNARGGVLGDTLANVLKRDGCNTWKEFYVNDAGNQIHKFAVSINA 189

Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           RY Q +   ++   PE  Y G  +K + + + DK+     + PEE+ L  + +Y +   +
Sbjct: 190 RYMQLIVGEENFPFPEEGYHGDDIKELAQAIYDKHGDSWKDLPEEERLDKLAEYGLSVNI 249

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQ 300
             +  DLK   I +D +  E   H  +   + + ++ L ++G+ YE  G L    +K  +
Sbjct: 250 PRMESDLKRYGIVYDQWFFESSLH--NSGYVAETVELLEKKGWTYEKDGALWLNTTKLLK 307

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
           +  M   +   +   + D  D  L + +G YTYFAAD+AY + K   RGFD  I + G+D
Sbjct: 308 EKFMREGKTQEQVDKL-DLKDDVLRRGNGFYTYFAADIAYHRNKLAVRGFDKAINIWGAD 366

Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H G+V RL+A    +      ++ V+L +LV L +DG P++MSKR+G  I L  ++DE+ 
Sbjct: 367 HHGHVARLQAALDGLGLDGSHRLVVVLMQLVNLMQDGKPVRMSKRSGKTIALHDLLDEIS 426

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R ++  LDFD      +  ENPV+YVQYA+AR  S+  +  +    +   
Sbjct: 427 VDAARYFFNSRASTSPLDFDLDLAVREDSENPVYYVQYAHARICSLIARLAEEGAQVP-- 484

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +         EL LI  LA++P  I  A    +P ++  YL  LA  FH  ++ 
Sbjct: 485 --QAGDVDAAVLNTPEELALIKALAQFPEEIHLAARDYDPSRINRYLVALAGDFHRFYNA 542

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       ++    ++   RL+L   V S++ +G+ ++GV +P +M
Sbjct: 543 CR-------IKGEEPQVLGARLKLADTVRSVLANGMGLLGVSAPEKM 582


>gi|21233284|ref|NP_639201.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770242|ref|YP_245004.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993440|ref|YP_001905450.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|23822184|sp|Q8P455|SYR_XANCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81303810|sp|Q4UPN9|SYR_XANC8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558815|sp|B0RXM6|SYR_XANCB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21115122|gb|AAM43092.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575574|gb|AAY50984.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735200|emb|CAP53412.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 562

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKAQLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ ++A +    DV  V IAG GFIN +L+P+  ++ +  ++  G +YGR L G G 
Sbjct: 61  RALAQALLAALPASDDVARVEIAGPGFINFHLTPAAYQREVIHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  + +  PE  Y G Y+  V K        D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVAKAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVDEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGLK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L L++ L+ Y  V+E A    EPY++A YL +LA  FH 
Sbjct: 462 YDQ---THGMAELARLDDEHSLALMLELSRYAEVVELAGQTLEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|284032952|ref|YP_003382883.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812245|gb|ADB34084.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 552

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 199/583 (34%), Positives = 313/583 (53%), Gaps = 38/583 (6%)

Query: 6   DFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + ++   L  +  D  I V+  +   + +ERP++  HG  +TN AM L +  GL+P  
Sbjct: 5   QLAEKILQALTALVDDGTITVDGGLPRELKVERPKNPEHGDYATNVAMQLGKRSGLNPRR 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            AEL+ A++  D  + +V IAG GFINL ++     KI  +IV +G  YG +   +G  +
Sbjct: 65  FAELLAAKLDSDDAITAVEIAGPGFINLRVAADAQGKIAQAIVDAGPAYGSSDSLQGQAI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EF+SANPTGP+H+GH R A VGD LA ++A +G  VTRE+Y+ND GAQ++    S+  
Sbjct: 125 NLEFISANPTGPLHLGHTRWAAVGDALARVLAKAGAVVTREFYVNDRGAQMDKFGASLKA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q         +PE  Y G Y+  + + +  +    +   P+ +     ++   +  +K
Sbjct: 185 AAQ------GQPIPEDGYHGAYILELAERIVAEV-PGITELPDAEQTVAFREAGYERQLK 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +  L+    + D++ SE   H  +   +   I+ L  QG++Y+               
Sbjct: 238 EQQAQLEHFRTKFDVWYSERSLH--EQDGVGHAIEKLRGQGHLYD--------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            D   L  R+T   DD DR L++S+G  TYFA+D AY+  K ERGF+  IY++G+DH GY
Sbjct: 281 -DDGALWMRTTDFTDDKDRVLIRSNGEPTYFASDAAYYVNKRERGFEVAIYLLGADHHGY 339

Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           V RL+A+AA   +     I +L+ +LV++ + G  +K+SKRAG  +TL  +V+E G D +
Sbjct: 340 VNRLKAIAACAGDDPEHNIEILIGQLVKILKGGEEMKLSKRAGTIVTLAELVEEGGVDPL 399

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +        L  D  ++  Q  ENPV+YVQYA+AR  SI R A D+   LD   F  
Sbjct: 400 RYTLCRYPVDSPLTLDIEEMTRQVSENPVYYVQYAHARLASILRNADDLGIKLDE--FDP 457

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            ++  + E D     L+  LAE+PR++  A   +EP+++A YL D AS FH  +   R  
Sbjct: 458 GLLSHDREGD-----LLRALAEFPRIVATAAELREPHRIARYLEDTASAFHKFYDSCRVL 512

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           PR          +   RL LV A  +++ +GL+++GV +P  M
Sbjct: 513 PRG---DEEVEPVHKARLTLVGATRTVLANGLDLLGVSAPERM 552


>gi|188578900|ref|YP_001915829.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|109895055|sp|Q5H5M2|SYR_XANOR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689549|sp|B2SS22|SYR_XANOP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188523352|gb|ACD61297.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 562

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ ++  +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALLTALPDSNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  + +  PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLTGDTVDMEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + RDG  +K+ KRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A    EPY++A YL +LA  FH 
Sbjct: 462 YDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|303238405|ref|ZP_07324940.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302594109|gb|EFL63822.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 565

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 187/586 (31%), Positives = 321/586 (54%), Gaps = 31/586 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L +  S  +KN L       ++ +  +  IVIE PR+  HG  STN AM  ++     P 
Sbjct: 8   LKSQISEVVKNSLSRAVASGELPEFEVGEIVIETPREKEHGDFSTNIAMQAAKAAKKAPR 67

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA++I+  ++ +    + V  AG GFIN YL+  +L   L +I     +YG   +GKG+
Sbjct: 68  QIADIIIKNMEFEGTYVEKVETAGPGFINFYLNNLWLYDTLKTIQTMKDKYGEINVGKGS 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+G+ R   +GD +AS+++ +GY+VTRE+Y+NDAG QI    +S+
Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLSKAGYDVTREFYVNDAGNQIEKFGISL 187

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             RY Q L   D+ + PE  Y G  +    K+       +LL+   E+    + ++++  
Sbjct: 188 EARYIQQLKGEDAVEFPEDGYHGEDIIEHMKDYIAINGDKLLSVDSEQRRKELVEFALPR 247

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ IR  +++  ++ D++ SE   +  D   ++D ++ L   G+ YE            
Sbjct: 248 NIERIRSGMESYGVKFDVWFSEQSLY--DSGELKDTLELLKNNGHTYE------------ 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
                   + F+++ +G + D  +++++G  TYFA+D+AY K K+ +R +D +I ++G+D
Sbjct: 294 ----KDGAIWFKTSELGTEKDEVIVRNNGLPTYFASDIAYHKNKFLKRNYDRVINLLGAD 349

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G+V R++A   A+     +++V+L +LVRLYR+G   +MSKR G  I+L  +++EVG 
Sbjct: 350 HHGHVARMKAAVKAIDVDPDKLDVVLFQLVRLYRNGEIARMSKRTGKSISLTDLLEEVGR 409

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF+   + +   +DFD     +QS ENPV+YVQYA+AR  S+ ++ +D     +  L
Sbjct: 410 DAARFIFNTKASGSHIDFDLDLAVKQSNENPVYYVQYAHARICSMIKRLEDE----NVKL 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +         E++L+  LAEYP  I  A    EP +L  Y+ D+A +FH  ++  
Sbjct: 466 QSVDSVDLTKLVAKEEIELMKKLAEYPEEIRIAAETLEPSRLTRYVLDVAGLFHSFYNAC 525

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   A    L   R+ LV +   +I + L+++ + +P +M
Sbjct: 526 ------KVKDAEGDSLRNARVVLVDSTRVVIKNVLDLLSISAPEKM 565


>gi|83721308|ref|YP_440913.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167579622|ref|ZP_02372496.1| arginyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167617702|ref|ZP_02386333.1| arginyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257140433|ref|ZP_05588695.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|109894978|sp|Q2T1N6|SYR_BURTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83655133|gb|ABC39196.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 594

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 201/615 (32%), Positives = 315/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P      D+  IAG GFINL L+P+  + ++ ++   G  +G +    
Sbjct: 69  LAERIVAALTAQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    +   L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDADDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++         EV            G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVLNEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  +       R+ L+ A   ++
Sbjct: 527 HAANELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARIALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|269794308|ref|YP_003313763.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269096493|gb|ACZ20929.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 559

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 194/588 (32%), Positives = 301/588 (51%), Gaps = 41/588 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S  L+  L        +      + ++I++ERPR   HG  +TN A+ L++  G  P 
Sbjct: 5   ELSEALRAALAAKIADGTLALDLDALPEQILVERPRQREHGDWATNIALQLAKKAGTQPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A+ +  R    P V SV +AG GF+N+ L  +   ++  +++  G  YGR +   G K
Sbjct: 65  ALADDLAVRFAETPGVKSVAVAGPGFLNITLDAAAAGELARTVIDQGAGYGRGVAEAGKK 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD+LA ++  +G EVTREYY ND GAQI+  + S+ 
Sbjct: 125 VNLEFVSANPTGPIHIGGVRWAAVGDSLARVLEAAGAEVTREYYFNDHGAQIDRFSRSLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238
            R +        D PE  Y G Y++ +   +          + L  P+E+   + +   V
Sbjct: 185 ARAK------GEDAPEDGYGGQYIQDIADAVLADVAAAGGPDPLTLPDEEAQEVFRSIGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M   I+  L    +  D++  ED  H  +   +   I  L   G+++E          
Sbjct: 239 DRMFTEIKAALHGFGVDFDVYFHEDTLH--ETGAVDRAIARLKDSGHMFEA--------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T  GDD DR ++KSDG   Y A D+AY+  K ERG D +I ++G+
Sbjct: 288 -------DGATWLRTTDFGDDKDRVVIKSDGQAAYIAGDIAYYLDKRERGADEVIIMLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GYV R+ AV AA  ++    + +L+ ++V L +DG P++MSKRAG  +TL  +VD V
Sbjct: 341 DHHGYVGRMMAVCAAFGDQPGTNLQILIGQMVNLLKDGEPLRMSKRAGTVVTLEDLVDAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       LD D   + + + ENPV+YVQYA+AR  ++ R A D     + 
Sbjct: 401 GVDAARYSLVRSSTDSSLDIDLDLLSKATNENPVYYVQYAHARTANVARNAADHGVRRE- 459

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D F  +++  E+     E  L+  L E+PRVI  A   +EP+++A YL  LA  +H  ++
Sbjct: 460 DAFDPSLLTAET-----ESALLGSLTEFPRVIAQAAELREPHRVARYLEALAGAYHKWYA 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P               RL L  A   ++ +GL ++GV +P  M
Sbjct: 515 DVRVTP---VGDEEIGDTHRTRLWLNDATRQVLANGLALLGVSAPERM 559


>gi|241661767|ref|YP_002980127.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240863794|gb|ACS61455.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 596

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 195/620 (31%), Positives = 298/620 (48%), Gaps = 71/620 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E +    IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTIAQLLSDAVGSLLPEGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGK 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LS +    +++++   G  YG      G  V
Sbjct: 66  IADAIRADARGQRLVSAVEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +      D++ PE  Y G Y+  +  +              +    + + L  ++ ++
Sbjct: 186 RAR-GYKPGDANWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGERDVENLEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      ++  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A    +     K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLNIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDAESEAGVDTIRACVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S ENPV+YVQYA+AR  S+F +A      L          P   +       L+  LA +
Sbjct: 467 SDENPVYYVQYAHARICSVFERAGVDPASLTNADLAAVTGP---DVSPQATALVQRLAAF 523

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A
Sbjct: 524 PDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAA 576

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL +IGV +P +M
Sbjct: 577 TRQVLRNGLTVIGVSAPQKM 596


>gi|206901295|ref|YP_002251195.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740398|gb|ACI19456.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 550

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 198/583 (33%), Positives = 315/583 (54%), Gaps = 33/583 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       +KN +  +  K       ++ I+IE P+   +G  +T  A+ +++     P 
Sbjct: 1   MRKHIYELIKNAINVLKEKENFTTDEIE-IIIETPKQKEYGDYATAVALQIAQKNKKPPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE I+  ++  P +    IAG GFIN +L+   L + L  ++   ++   ++  K  K
Sbjct: 60  IVAEKILENLEKSPFIRKAEIAGPGFINFFLNDEALWETLR-LIRKDLDSFVSIPPKKKK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EF S NPTGPMH+ H R   +GD+LA+L    G+ V +E+YINDAG QI+ L  S++
Sbjct: 119 IQLEFGSINPTGPMHIAHARGVTIGDSLANLFRRIGWNVEKEFYINDAGNQIDLLGESLY 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY Q L   D  +P+  Y G YL  + KEL ++   ++    E +     K+Y++  M+
Sbjct: 179 ARYMQLL-GYDHPVPDEGYHGNYLIELAKELLNQ-KDQIEKMNETEKKKFFKEYALSKML 236

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I+  L    +++D++ SE   H  +   +++++D L + GY YE              
Sbjct: 237 EDIKTTLLDFGVEYDVWFSERTLH--ENGKVKEVLDILVKNGYAYE-------------- 280

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 + F ST  GD+ DR L+KSDG  TYF AD+AY   K +RGFD +I V G+DH  
Sbjct: 281 --KDGAIWFLSTKFGDEKDRVLVKSDGKPTYFLADIAYHLNKIQRGFDWIIDVWGADHHS 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V RL+    A+   K  + ++L ++VRL +    IKMSKR GDF+TL+ V +EVG D +
Sbjct: 339 HVTRLKGAIQALGYPKDILEIILVQMVRLMKGNEEIKMSKRTGDFVTLKEVQEEVGKDPI 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF  L R     LDFD    K+QS ENPV+YVQYA+ARC SI + A+       ++L   
Sbjct: 399 RFFFLLRSPESQLDFDIELAKKQSVENPVYYVQYAHARCCSILKNAEAKG----YNLADL 454

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +        +  E  LI++L  YP  +++ T   E ++L FYL +L+++FHG++   +  
Sbjct: 455 DQANLSLLKEEKEKDLILNLLRYPEKLDDITRTLEIHQLPFYLLNLSTLFHGYYDSHK-- 512

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                V   +R LT+ RL L+  +  II   L+I+GV +P +M
Sbjct: 513 -----VITEDRDLTLARLVLIDCIRIIIKDALSILGVSAPEKM 550


>gi|94986673|ref|YP_594606.1| arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082175|sp|Q1MRU1|SYR_LAWIP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94730922|emb|CAJ54285.1| Arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 550

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 208/564 (36%), Positives = 311/564 (55%), Gaps = 31/564 (5%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSV 81
           K+      + VIE P++  HG L+TN A++L+  +G++P  IAE I  +++       SV
Sbjct: 17  KLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEKIAEKLQQESTSFSSV 76

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            +AG GF+N+  SP++ +K ++ I+  G  YG   +G   KV IE+VSANPTGP+H+GH 
Sbjct: 77  SVAGPGFLNITFSPTFWQKTINHILSKGSSYGSCQLGNKQKVLIEYVSANPTGPLHIGHG 136

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R A +GDTLA L+ F+GY VT EYYINDAG Q+  L LS++ R ++ L       PE YY
Sbjct: 137 RGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIKE-LSGIQVTWPEEYY 195

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            G Y+  + K L ++    +     +        + +  ++  I+ DLK   ++H+ + S
Sbjct: 196 KGTYIIEIAKALLEEQPDIISYTDIDGEQASFH-FGMNVILNGIKQDLKTFKVEHEEWFS 254

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E    +   + I   +  L   G  +E                    L F+ST+ GDD D
Sbjct: 255 ERTLIK--TNAIEQTLKALECTGLTFE----------------KEGALWFQSTVFGDDKD 296

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           R L KSD S TYFA D+AY   KY RGFD +I ++G+DH GY+ R++A   A        
Sbjct: 297 RVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIARIKAAMQAFGHDPMTF 356

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +++L +LV L  +G+ + MS RAG F  L  V++EVG D+ RFM L RK+   LDFD   
Sbjct: 357 DIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINEVGVDAARFMFLLRKSDAHLDFDLEL 416

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           VK+++  NPV+YVQYAYAR  SI R+A     DL F +   N +P  +     EL L+  
Sbjct: 417 VKQRTMNNPVYYVQYAYARICSIIRKAH----DLGFTITDVNEVPLSNITTKDELNLLRL 472

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L ++  VI NA     P+ +  YL +LA   H +++      +   +Q+N + + + RL 
Sbjct: 473 LDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYA------KYPVLQSNEKTIVLSRLA 526

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+ AV  +I + LNI+GV +P  M
Sbjct: 527 LLQAVGQVIYNALNILGVTAPKNM 550


>gi|289666332|ref|ZP_06487913.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 562

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/591 (32%), Positives = 309/591 (52%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPADTLPPDCVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ ++A +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RVLAQALLAALPASDDVAKVDIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  + +  PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQQLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH 
Sbjct: 462 YDQ---THGLAELAHLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|56416837|ref|YP_153911.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|255003182|ref|ZP_05278146.1| arginyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255004313|ref|ZP_05279114.1| arginyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|81359057|sp|Q5PAM4|SYR_ANAMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56388069|gb|AAV86656.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 579

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 237/584 (40%), Positives = 354/584 (60%), Gaps = 14/584 (2%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            LF +F   +   + E+    +V   +L ++++  P +  HG + TNAA+++ +    +P
Sbjct: 9   NLFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNP 67

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + IAE +   +     VDSV +   GF+NL  S       +  I  +G +YG   +G+G 
Sbjct: 68  MEIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQ 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KVN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL  SV
Sbjct: 128 KVNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESV 187

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + RY++AL      + EG YPG YLK + K L +K+  +LL    E    ++++++++++
Sbjct: 188 YLRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSI 244

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +IR+D+  L ++HD+F  E D  R     +   ++ L ++G +Y G L  P+    + 
Sbjct: 245 LDLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEA 302

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
               R+QLLFRST  GDD DR L K DGS+TYFA D+AY   K  RGF +MI  +G DH 
Sbjct: 303 AWQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHK 362

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV RL+A   A+S+ KA I+V L  +V    +G+P+KMSKR G+F+T R VV+EVG D 
Sbjct: 363 GYVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDV 422

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF+M+ RKN  +LDFDF K KEQSK++ +FY+QYA+AR  S+ R A  + P  D D   
Sbjct: 423 ARFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSR 482

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +  P        E+ LI  L  +P ++E++ +  EP+++AFYL ++A  FH  W HG  
Sbjct: 483 VSSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSR 534

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +RF+   +   T  R+ LV  VA +I+ GL+I  +    EM
Sbjct: 535 SVDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 578


>gi|84622118|ref|YP_449490.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|109895054|sp|Q2P8B1|SYR_XANOM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|84366058|dbj|BAE67216.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 562

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ ++  +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALLTALPDSNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  + +  PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDMEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + RDG  +K+ KRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A    EPY++A YL +LA  FH 
Sbjct: 462 YDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|294625197|ref|ZP_06703839.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600516|gb|EFF44611.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 569

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/592 (32%), Positives = 309/592 (52%), Gaps = 37/592 (6%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +
Sbjct: 7   HVKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 66

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ ++A +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G
Sbjct: 67  PRALAQALLAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNG 126

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALS
Sbjct: 127 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 186

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235
           V  R  Q L  + +  PE  Y G Y+  V          D     +    +   L  ++ 
Sbjct: 187 VQAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLEAIRR 245

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE       
Sbjct: 246 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 296

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                    +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  
Sbjct: 297 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 347

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR +
Sbjct: 348 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDL 407

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++   
Sbjct: 408 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 467

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH
Sbjct: 468 KYDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFH 524

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + +       V  +       +L L  A   ++ +GL ++GV +P +M
Sbjct: 525 TWYHNSK-------VLVDAAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 569


>gi|326332896|ref|ZP_08199153.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325949254|gb|EGD41337.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 554

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 187/583 (32%), Positives = 296/583 (50%), Gaps = 36/583 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV--EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             S+ + + L  +  +  +     +   + +ERPR   HG  +TN A+ L++  G +P  
Sbjct: 5   QLSTAVVDVLTALVDEGAITLPDGVPSTVTVERPRQKGHGDYATNVALQLAKKAGTNPRQ 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + E I A++K    V  V IAG GF+N+ +      K+   IV +G  YG N   KG  +
Sbjct: 65  LGEQIAAKLKESDGVADVEIAGPGFLNISVEAGAQGKLAGEIVAAGKAYGNNDSFKGHNI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++  SG EVTREYY ND G QI+  A S+  
Sbjct: 125 NLEFVSANPTGPLHLGGVRWAAVGDALGRVLEASGAEVTREYYFNDHGGQIDRFARSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q         +PE  Y G Y++ + K++  K  + L     ++   + +   V+ M  
Sbjct: 185 WAQGK------PVPEDGYGGAYIEEIAKQVLAKEPNALEADDPQE---VFRAIGVELMFA 235

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L   N+  D++  ED+ H+     +   I+ L   G VYE               
Sbjct: 236 EIKKSLHDFNVDFDVYFHEDNLHK--SGAVERAIEKLRELGNVYE--------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +   +   GDD DR ++K+DG+  YF+ DLAY+  K ERGFD    ++G+DH GY
Sbjct: 279 -KDGAIWLATEKFGDDKDRVVIKADGNGAYFSGDLAYYLDKRERGFDRCFIMLGADHHGY 337

Query: 364 VKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           V R+ A+ AA  +     + +L+ ++V L +DG P++MSKRAG  +T+  +V+ +G D+ 
Sbjct: 338 VGRMMAMCAAFGDTPHENLEILIGQMVNLLKDGQPMRMSKRAGTVVTIDDIVEAIGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +    +   +D D     +    NPV+YVQY +AR   +   A D+   +D D F  
Sbjct: 398 RYALARYSSDSNIDIDLDLWAKADSANPVYYVQYVHARTCRMMANAADLGMAIDLDTFDP 457

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +++    E      +L+  LAE PRV+  A   +EP+++A YL D A +FH  +    + 
Sbjct: 458 SLLTHAREG-----ELLRALAELPRVVATAAELREPHRVARYLEDTAGIFHRWYDD-DDC 511

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L         + + RL LV A  ++  +GL ++GV +P  M
Sbjct: 512 RMLPKGDEPVAPVNLARLALVSAARTVFANGLGLLGVSAPERM 554


>gi|109895053|sp|Q3BNA3|SYR_XANC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 194/591 (32%), Positives = 308/591 (52%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALVAALPASDDVAKVDIAGPGFINFHLAPTAYQRQVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  +    PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVASAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH 
Sbjct: 462 YDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|222475202|ref|YP_002563618.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
 gi|222419339|gb|ACM49362.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
          Length = 593

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 237/584 (40%), Positives = 354/584 (60%), Gaps = 14/584 (2%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            LF +F   +   + E+    +V   +L ++++  P +  HG + TNAA+++ +    +P
Sbjct: 23  NLFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNP 81

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + IAE +   +     VDSV +   GF+NL  S       +  I  +G +YG   +G+G 
Sbjct: 82  MEIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQ 141

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KVN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL  SV
Sbjct: 142 KVNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESV 201

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + RY++AL      + EG YPG YLK + K L +K+  +LL    E    ++++++++++
Sbjct: 202 YLRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSI 258

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +IR+D+  L ++HD+F  E D  R     +   ++ L ++G +Y G L  P+    + 
Sbjct: 259 LDLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEA 316

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
               R+QLLFRST  GDD DR L K DGS+TYFA D+AY   K  RGF +MI  +G DH 
Sbjct: 317 AWQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHK 376

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV RL+A   A+S+ KA I+V L  +V    +G+P+KMSKR G+F+T R VV+EVG D 
Sbjct: 377 GYVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDV 436

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF+M+ RKN  +LDFDF K KEQSK++ +FY+QYA+AR  S+ R A  + P  D D   
Sbjct: 437 ARFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSR 496

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +  P        E+ LI  L  +P ++E++ +  EP+++AFYL ++A  FH  W HG  
Sbjct: 497 VSSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSR 548

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +RF+   +   T  R+ LV  VA +I+ GL+I  +    EM
Sbjct: 549 SVDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592


>gi|170781869|ref|YP_001710201.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189083527|sp|B0RAP7|SYR_CLAMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169156437|emb|CAQ01585.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 554

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 190/558 (34%), Positives = 292/558 (52%), Gaps = 35/558 (6%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
            D +V+ERPR+  HG  +TN AM +++PLG  P TIA  I   +   P V  V +AG GF
Sbjct: 31  PDMVVLERPRNRDHGDWATNIAMRIAKPLGESPRTIAADIAKALGELPQVAKVDVAGPGF 90

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN+ L  +    +  +IV SG  YGR    +G ++N+EFVSANPTGP+H+G  R A VGD
Sbjct: 91  INITLEAAAAGALAHTIVESGPAYGRGHSLEGIRINLEFVSANPTGPIHLGGVRWAAVGD 150

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +LA ++   G +VTREYY ND G+QI+  A S+   +         + PE  Y G Y+  
Sbjct: 151 SLARILQAEGADVTREYYFNDHGSQIDRFARSLLASHL------GEETPEDGYGGAYIGE 204

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + + + + Y  ++     E    + +    + M   I+  L    +  D+F  ED  H  
Sbjct: 205 IAERVVEGYEGDIDALTREAQQEVFRKSGTELMFGEIKQKLHDFGVDFDVFFHEDSLH-- 262

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   +   I  L   G+V+E                +   +  R+T  GDD DR +++S 
Sbjct: 263 ESGAVDRAIARLTELGHVFE----------------EDGAIWLRTTTFGDDRDRVVIRST 306

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCE 387
           G   Y + DL Y+  K ERGF+  I ++G+DH GYV R+ A+  A  +     + +L+ +
Sbjct: 307 GEPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMVEAFGDTPGVNLQILIGQ 366

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V L RDG P++MSKRAG  +TL  +VD VG D+ R+ ++     + LD D   + +++ 
Sbjct: 367 MVNLLRDGEPVRMSKRAGTIVTLDDLVDAVGVDAGRYALVRSSADQNLDIDLAVLGKRTN 426

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR  ++ R A     D       R+    E     +E  L+  L E+PR
Sbjct: 427 DNPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPR 479

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++  A   +EP+++A Y+ +LA  +H  +   R  PR          L   RL L  AV 
Sbjct: 480 IVAQAAELREPHRVARYVEELAGSYHRWYDSCRVVPRG---DEEVTDLHRTRLWLNDAVR 536

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GLN++GV +P  M
Sbjct: 537 QVVANGLNLVGVSAPERM 554


>gi|186474957|ref|YP_001856427.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691324|sp|B2JKJ2|SYR_BURP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|184191416|gb|ACC69381.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 594

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 191/615 (31%), Positives = 312/615 (50%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    + E +   I   I +ERP+  AHG ++ N AM L++P+  +P  
Sbjct: 9   LETLLTDVVKQVAQATQGESEAAFIAPAITLERPKVAAHGDVACNVAMQLAKPMRANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +  DP     VD   +AG GFINL LS +  + +++++      +GR+    
Sbjct: 69  LAQQIVDALLADPLAKGLVDGAEVAGPGFINLRLSAASKQAVIAAVFAQREAFGRSQREA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD +++++A  G++V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLVEFVSANPTGPLHVGHGRQAALGDAMSNVLASQGFDVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIV 233
           S   R +  L   D   PE  Y G Y+  + ++  +           +    + + L  +
Sbjct: 189 STQARAR-GLKPGDPGWPEAAYNGEYIADIARDYLNGETVSASDGEPVKGAGDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  +      DL+A  ++ D +  E   ++     +   ++ L   G  YE     
Sbjct: 248 RRFAVAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVNELIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + KSDG+YTYF  D+AY + K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHETKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGAVPGQEAAPDLLDEETIRRGRDAVRFFLISRKADTEFVFDVDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   +  L   ++ P +SE  T    L+  LAE+P ++ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGADETGLPVVDLSPLDSERAT---ALLQKLAEFPDMLT 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++  R       V  ++      R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRNARIALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL +IGV +P +M
Sbjct: 580 ANGLAVIGVSAPAKM 594


>gi|21244635|ref|NP_644217.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21110319|gb|AAM38753.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 569

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 193/592 (32%), Positives = 308/592 (52%), Gaps = 37/592 (6%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +
Sbjct: 7   HVKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 66

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ ++A +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G
Sbjct: 67  PRALAQALLAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNG 126

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALS
Sbjct: 127 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 186

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235
           V  R  Q L  +    PE  Y G Y+  V          D     +    +   L  ++ 
Sbjct: 187 VQAR-AQGLTPDSDGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRR 245

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE       
Sbjct: 246 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 296

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                    +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  
Sbjct: 297 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 347

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR +
Sbjct: 348 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDL 407

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++   
Sbjct: 408 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 467

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH
Sbjct: 468 KYDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFH 524

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + +       V  +       +L L  A   ++ +GL ++GV +P +M
Sbjct: 525 TWYHNSK-------VLVDAAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 569


>gi|187927245|ref|YP_001897732.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309780055|ref|ZP_07674808.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|238691829|sp|B2UDW0|SYR_RALPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187724135|gb|ACD25300.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308921225|gb|EFP66869.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 596

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 194/620 (31%), Positives = 298/620 (48%), Gaps = 71/620 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E +    IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTIAQLLSDAVGSLLPEGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGK 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LS +    +++++   G  YG      G  V
Sbjct: 66  IADAIRADARGQRLVAAVEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +      D++ PE  Y G Y+  +  +              +    + + +  ++ ++
Sbjct: 186 RAR-GYKPGDANWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGERDVENIEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      ++  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A    +     K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLNIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDAESEAGVDTIRACVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S ENPV+YVQYA+AR  S+F +A      L          P   +       L+  LA +
Sbjct: 467 SDENPVYYVQYAHARICSVFERAGVDAASLTSADLAAVTGP---DVSPQATALVQRLAAF 523

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A
Sbjct: 524 PDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAA 576

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL +IGV +P +M
Sbjct: 577 TRQVLRNGLAVIGVSAPQKM 596


>gi|330818465|ref|YP_004362170.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370858|gb|AEA62214.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 594

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 198/615 (32%), Positives = 315/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++   +K E +   +   I +ERP+  AHG ++ N AM L++PLG +P  
Sbjct: 9   LETLLADSVKQVVQALKGESEAGFVAPTITLERPKAAAHGDVACNVAMQLAKPLGTNPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P     V++  IAG GFINL L+ +  + ++ ++      +GR+    
Sbjct: 69  LAEKIVAAVTAHPSAAGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAEREAFGRSAHEA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LAL
Sbjct: 129 GRRVLLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIV 233
           S   R +  L   D+D PE  Y G Y+  + ++              +    + + +  +
Sbjct: 189 STQARAR-GLKPGDADWPEAAYNGEYIADIARDYLAGATVSASDGEPVTGKGDIEDIEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   ++     +   +  L   G  YE     
Sbjct: 248 RKFAVAYLRREQDIDLKAFGVRFDQYYLESSLYQ--EGRVESTVQALVDAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K++RGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVAKWQRGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTVR 409

Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++         EV            G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPDAEVSPEQLDEAIITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K      +  L   ++ P +S+   S   L+  LAEYP ++ 
Sbjct: 470 VYYVQYAHARICSVLNEWKSRHGADEAILPGADLSPLDSKPAAS---LLQKLAEYPEMLT 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++  R       V  ++      R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRTARIALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV SP++M
Sbjct: 580 ANGLAVLGVSSPSKM 594


>gi|325928298|ref|ZP_08189500.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325541335|gb|EGD12875.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 562

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 194/591 (32%), Positives = 308/591 (52%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALVAALPASDDVAKVDIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  +    PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVASAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH 
Sbjct: 462 YDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|269958746|ref|YP_003328533.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848575|gb|ACZ49219.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 593

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 237/584 (40%), Positives = 354/584 (60%), Gaps = 14/584 (2%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            LF +F   +   + E+    +V   +L ++++  P +  HG + TNAA+++ +    +P
Sbjct: 23  NLFGNFRCIVIQKIGEL-WGSEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNP 81

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + IAE +   +     VDSV +   GF+NL  S       +  I  +G +YG   +G+G 
Sbjct: 82  MEIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQ 141

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KVN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL  SV
Sbjct: 142 KVNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESV 201

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           + RY++AL      + EG YPG YLK + K L +K+  +LL    E    ++++++++++
Sbjct: 202 YLRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSI 258

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +IR+D+  L ++HD+F  E D  R     +   ++ L ++G +Y G L  P+    + 
Sbjct: 259 LDLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEA 316

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
               R+QLLFRST  GDD DR L K DGS+TYFA D+AY   K  RGF +MI  +G DH 
Sbjct: 317 AWQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHK 376

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV RL+A   A+S+ KA I+V L  +V    +G+P+KMSKR G+F+T R VV+EVG D 
Sbjct: 377 GYVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDV 436

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF+M+ RKN  +LDFDF K KEQSK++ +FY+QYA+AR  S+ R A  + P  D D   
Sbjct: 437 ARFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSR 496

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +  P        E+ LI  L  +P ++E++ +  EP+++AFYL ++A  FH  W HG  
Sbjct: 497 VSSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSR 548

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +RF+   +   T  R+ LV  VA +I+ GL+I  +    EM
Sbjct: 549 SVDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592


>gi|166713832|ref|ZP_02245039.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 562

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ ++  +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALLTALPASNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  + +  PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + RDG  +K+ KRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A    EPY++A YL +LA  FH 
Sbjct: 462 YDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|325919705|ref|ZP_08181707.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549813|gb|EGD20665.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 562

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++P   +P
Sbjct: 1   MKAQLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKPARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ +VA +    +V  V IAG GFIN +L+PS  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALVAALPASDEVAKVEIAGPGFINFHLTPSAYQREVAHVIKQGPDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  +    PE  Y G Y+  V          D     +    +   +  ++ +
Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTQDPADIESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A  +   +     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQALELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    ++QS +NPVFYVQYA+AR  S+ RQA +    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSVLRQALEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            +       +       D   L ++V L+ Y  V+E A    EPY++A YL +LA  FH 
Sbjct: 462 YEQ---AHGLAELARLDDEHSLNVMVELSRYAEVVEVAGQTLEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       +  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNTK-------LLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|317123140|ref|YP_004103143.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593120|gb|ADU52416.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 566

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 188/569 (33%), Positives = 294/569 (51%), Gaps = 31/569 (5%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+  +     +    + +E PRD  HG  ++NAA++L+   G  P  +A +    +    
Sbjct: 29  ELPAEADPANESWRGVQVEVPRDPRHGDFASNAALVLAGRAGRPPREVAAVFQRHLPGGA 88

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            +  V +AG GF+N YL+ ++ ++ + +I+ +G  +G    G G KV +EFVSANPTGP+
Sbjct: 89  WLRQVEVAGPGFLNFYLADAWWKEGVRAILQAGDAFGATDAGAGRKVQVEFVSANPTGPL 148

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
            V + R A +GD LA ++  +GY V +E+Y+NDAG QI  LA SV  R +Q L   ++++
Sbjct: 149 GVVNARAAALGDALARVLEAAGYRVEKEFYLNDAGNQIRKLAQSVEARMRQEL-GQEAEI 207

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PEG YPG YL  + ++L       LL+ PEE+    +  ++V++++  +R  L    ++ 
Sbjct: 208 PEGGYPGAYLIDIARDLLAAEGPGLLDRPEEQRWERMARFAVESLVAQMRTQLARFGVEF 267

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++  E             +++ L ++  VYE                    +  RS+ V
Sbjct: 268 DVWYPESRVRA--EGYPERVLERLRQRDMVYEH----------------DGAVWLRSSAV 309

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR L++ DG YTY   D+AY   K+ERGF   I + G DH G+V  +EA   A+  
Sbjct: 310 GDDKDRVLVRRDGEYTYTLVDIAYHLTKWERGFQQAIDIWGQDHHGHVVPMEAALRALGL 369

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
                 VLL ++V L R G  ++MSKR G+ +T+   +DEV  D+ R+  L R     LD
Sbjct: 370 PDGWFEVLLTQMVHLVRGGQAVRMSKRRGELVTMAEFLDEVDVDAARYFFLMRSPDTHLD 429

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+YVQYA+AR   I RQA     + +  L P          D +E 
Sbjct: 430 FDLDLANLRSNENPVYYVQYAHARACGILRQA-----EAEAGLRPDPAADLSPLGDPAER 484

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L   L + P  +  A  A+EP++L +YL D+A++FH  ++  R       V      + 
Sbjct: 485 DLARRLLDLPGEVAAAAAAREPHRLTYYLKDVATLFHQFYTRCR-------VLGEEEPVA 537

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL LV A   ++   L ++GV +P  M
Sbjct: 538 RARLALVDATRRVLARTLGLLGVTAPERM 566


>gi|145596165|ref|YP_001160462.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305502|gb|ABP56084.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 554

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 183/583 (31%), Positives = 301/583 (51%), Gaps = 34/583 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ +  +      +  +  +++  L ++  +ERPR+  HG  ++  A+ LS+ +G+ P  
Sbjct: 4   AELAEVVLTAAHAVFTERGLDRSTLPEQTAVERPRNVEHGDYASTLALQLSKKVGVPPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +  ++     V SV IAG GF+N+ L  +   ++   IV +G EYGR+    G  +
Sbjct: 64  LAAALAEQLGQAVGVKSVEIAGPGFLNIRLDAAAAGQLAQVIVETGAEYGRSGRLAGQSI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L+ L+  +G  V  EYY NDAG+QI+  A S+  
Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGAAVATEYYFNDAGSQIDRFARSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G YL  + +++  +   ++L   +     + +   V+ M  
Sbjct: 184 AAK------GEPPPEDGYAGAYLAEIAQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L+   ++ D + +E D H  +   +   ++ L +QG+++E               
Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLH--NRGELELALERLRQQGHIFEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T  GDD DR L KSDG +TYFAAD AY+  K ERGF+ ++ ++G+DH GY
Sbjct: 281 --DGATWLRTTDFGDDKDRVLRKSDGEWTYFAADCAYYLDKRERGFERVVLMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           + R++A+ A   +   + + +L+ ++V L RDG P++MSKRAG  ++L  +VD +G D+ 
Sbjct: 339 LGRMKAMVACFGDDPGRNLEILIGQMVNLVRDGAPVRMSKRAGTVVSLEDLVDAIGVDAA 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +        +D D       +++NPV+YVQY  AR  S+ R A ++           
Sbjct: 399 RYALARYSTDSPIDIDIELWTRATRDNPVYYVQYVAARTASVGRNAAEVGLARGGS---- 454

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                E      E +L+  LAE+P V+  A   +EP+++A YL DLA  +H  + + R  
Sbjct: 455 ADFHPELLDHDKENELLKALAEFPAVVATAAELREPHRIARYLEDLAGAYHRFYDNCRVL 514

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           PR          L   RL L  A   +I +GL ++GV +P  M
Sbjct: 515 PRG---DEEITDLHRARLWLNDATRVVIANGLRLLGVAAPERM 554


>gi|317152002|ref|YP_004120050.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942253|gb|ADU61304.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 547

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 210/579 (36%), Positives = 322/579 (55%), Gaps = 36/579 (6%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              L+  L+++      E    D+ VIE P+D   G +S N AM+L++  G  P  IAE 
Sbjct: 4   KIHLETALRKVLADRGWE--WPDKGVIEPPKDRQFGDMSVNVAMMLAKQAGKPPRAIAEE 61

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           I A +  DP +  V IAG GF+N   +P +  + +  +  +G  YG + +GKG +V +E+
Sbjct: 62  IAAAMADDPRIARVDIAGPGFLNFTFAPGFWHETIGVVREAGQGYGASDLGKGVRVQVEY 121

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+H+GH R A +GD+L  +M  +GYEV  EYY+NDAG Q+  L  S+++R  +
Sbjct: 122 VSANPTGPLHIGHGRGAALGDSLVRIMEKAGYEVEAEYYVNDAGRQMRILGSSIWYR-LK 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           AL   D   PE YY G Y+  + +++    +  +L+  E+  + I +D  +  ++  IR+
Sbjct: 181 ALSGRDVAEPEDYYRGDYIIGIARDVLA-ANPGILDMDEKDAVEICQDRGMNDILDGIRE 239

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL+A  ++HD++ SE          + +   +L   G  +E                   
Sbjct: 240 DLRAFGVRHDVWFSEKSLVA--DGLVDETFADLRESGLGFE----------------QDG 281

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
              FRST  GDD DR L KS G  TYFA+D+AY   K++RGFD ++ + G+DH GYV R+
Sbjct: 282 AFWFRSTQFGDDKDRVLRKSSGDTTYFASDIAYHDHKFKRGFDLVVDIWGADHHGYVPRM 341

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            A   A+  KK  ++V+L  LV L RDG P+ MS RAG+F TL+ VVDEVG+D+ RFM L
Sbjct: 342 MAACEALG-KKGGLHVILVNLVNLLRDGEPVAMSTRAGEFETLKDVVDEVGADAARFMFL 400

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIP 486
            RK+   LDFD   VK+++ +NPVFYVQYA+AR  S+  +A +        D     ++ 
Sbjct: 401 SRKSDSRLDFDLELVKQKTMDNPVFYVQYAHARICSLNAKAAEAGVAPAGPDKAALALLD 460

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E + D     ++  L +YP  +E+A   Q P+ ++ YL +LAS  H ++++        
Sbjct: 461 TEYDLD-----VLRLLDQYPDYVESAARTQSPHLISTYLQELASTLHRYYTNCH------ 509

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V + +  +   RL L+  VA ++  GL ++GV +P  M
Sbjct: 510 -VLSADPAVASARLMLLGCVAGVVRDGLGLLGVSAPESM 547


>gi|291279741|ref|YP_003496576.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754443|dbj|BAI80820.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 543

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 202/579 (34%), Positives = 315/579 (54%), Gaps = 36/579 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +R+K  ++    K+ V     +  +IE P+D  +G  +TN AM L++    +P  IA 
Sbjct: 1   MENRIKELIENALDKLGVNN--FNDFIIEIPKDSKNGDFATNVAMKLAKVFKKNPRDIAS 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  I+ D  +D + IAG GFIN +++  Y   I+  ++     Y     G+  +V +E
Sbjct: 59  DLVTNIEKDNFIDKIEIAGPGFINFFINKKYFESIIEQVLKD-ENYFVLDFGENKRVLVE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R A  GDTLA L+  +G++V +EYYINDAG Q+  L  S+  RY+
Sbjct: 118 FVSANPTGPLHIGHGRGAAYGDTLARLLRVAGFQVEKEYYINDAGNQMKMLGDSIVTRYK 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q +     ++ +  Y G Y+  + K++ ++Y   LL+ PE K   I     +  +MK I 
Sbjct: 178 QLVNGKIEEM-QDGYRGEYIIDIAKKIYEEYGDSLLDDPE-KCFNICFKTGLDEIMKSIV 235

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           DDL    +  D + SE      +   +   +  L   GY+YE                  
Sbjct: 236 DDLDDFRVSFDRWFSEKSLF--EKGVVDKALSILDENGYLYE----------------KD 277

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + F+ST  GD+ DR + K+DGSYTYFA+D+AY   K ERG+D  + V G+DH GY+ R
Sbjct: 278 GAVWFKSTSFGDEKDRVVKKADGSYTYFASDIAYHLNKIERGYDLFVNVWGADHHGYMNR 337

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           +     A+      + ++L ++V L + G  I MS RAG+FITLR ++DEVG+D+ RF  
Sbjct: 338 MFGALKALGAPDDILKIVLIQMVNLVKGGERISMSTRAGEFITLRWLIDEVGADAARFFY 397

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R ++   DFD    K +S +NPV+YVQYA+AR  S+F  A +   +       R    
Sbjct: 398 LMRDHNAQFDFDIDLAKSKSSDNPVYYVQYAHARVNSLFENAIEKGVEF------RLAEN 451

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +      E ++I  + E  +VI+ A    EP+++++YL +LAS+FH ++ + +      
Sbjct: 452 LDKLTLDQEKEIIKKIDELKKVIKAAATHLEPHRISYYLQELASLFHNYYYNFK------ 505

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + +++ +LT  RL L  AVA  I  GL I+GVE+P +M
Sbjct: 506 -IISDDYELTNARLNLAKAVAKTIKFGLEILGVEAPEKM 543


>gi|326203285|ref|ZP_08193150.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986543|gb|EGD47374.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 564

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 194/586 (33%), Positives = 305/586 (52%), Gaps = 32/586 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       + N + +     ++    +  I IE PR+  HG  STN AM +++     P 
Sbjct: 8   IRQQIKDAVINSINKSVETGELPSLEITDITIEIPREKGHGDFSTNVAMQITKTAKKAPR 67

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA+ I+  I  D      V  AG GFIN  L  SYL + +S I      YGR  IG G 
Sbjct: 68  QIADTIIKNIITDGTYIKKVDCAGPGFINFTLDNSYLYETISIIEQEKENYGRIDIGNGK 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+H+G+ R   +GD +AS++  +GY VTRE+ INDAG QI     S+
Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLDAAGYNVTREFLINDAGNQIEKFGTSL 187

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             RY Q +   D+ + PE  Y G  +    ++    +  + +N   E+   I  D+++  
Sbjct: 188 EARYIQLIKGEDAIEFPEDGYHGEDIAEHMRDFIAIHGDKYINTDSEERKKIFVDFALPR 247

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  I++ L++  I  D++ SE   H+     + + I  L  +    E            
Sbjct: 248 NIARIKEGLESYGIHFDVWFSEQTLHK--SGEVAETIQLLKDRDCTVE------------ 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
                   L  + +++G + D  L++++G  TYFAAD+AY + K+E RGF+ +I + G+D
Sbjct: 294 ----KEGALWLKGSVIGSEKDEVLVRNNGIPTYFAADIAYHRNKFEKRGFEWVINLWGAD 349

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G+V R++A  AA+     +++V+L +LVRLYR+G   +MSKR G  I+L  +V+EVG 
Sbjct: 350 HHGHVARMKAAMAAIGVDPDRLDVVLFQLVRLYRNGEIARMSKRTGKSISLMDLVEEVGR 409

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D VRF    + +   LDFD     ++S ENPVFYVQYA+AR  S+F+    +       L
Sbjct: 410 DGVRFFFNTKASGSHLDFDLDLAVKESNENPVFYVQYAHARICSMFK----LLESEGIRL 465

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + I  E      EL+LI  L+EYP  +  +    EP +L  Y++++AS FH  ++  
Sbjct: 466 PAASEIKAELLDKLEELELIRKLSEYPDEVRISAETLEPSRLTRYVHEVASTFHSFYNAC 525

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V+    +L   RL LV+   ++I + L+++ + +P  M
Sbjct: 526 R-------VRGEEEELMKARLVLVNCTRTVIKNVLDLLSINAPERM 564


>gi|310829664|ref|YP_003962021.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741398|gb|ADO39058.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 563

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 198/596 (33%), Positives = 294/596 (49%), Gaps = 44/596 (7%)

Query: 1   MYLFADFSSRLKNYLK----EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           MY+     +++K  +               + L  I +E PR+  HG  +TN AM L + 
Sbjct: 1   MYIREKIENQIKALIAGSVDAAMEAGDFSVEALPEIYLEVPREKEHGDYATNIAMQLPKQ 60

Query: 57  LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               P  IAE IV  + ID    ++V IAG GFIN  L   ++ ++L  I      YG+ 
Sbjct: 61  AHKAPRVIAESIVRHMNIDSSYVEAVEIAGPGFINFKLKSDWVYEVLLEIEAMQENYGKT 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
               G K N+EF+SANPTGPMH+G+ R   +GD LA++  ++GY+VTRE+Y+NDAG QI 
Sbjct: 121 QGNAGKKYNLEFISANPTGPMHMGNARGGAIGDILAAIAEWTGYDVTREFYVNDAGNQIA 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPEEKWL 230
               S+  R++Q L   D   PE  Y G  ++   +E  D+        + L   E +  
Sbjct: 181 KFGDSLDARFRQ-LMGEDIPFPEDGYQGNDIRVHMEEFIDQEGGADACQKYLTMDEAERK 239

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            I  DY+++  +K +  DL+   I +DI+ SE   +  D   I   +  L   G VYE  
Sbjct: 240 GIFVDYALEKNLKKMHADLEKYGIHYDIWFSEQSLY--DQGAIESALKILQDSGAVYE-- 295

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349
                             L F ++  G + D  L++ +G  TYF  D+AY   K++ RGF
Sbjct: 296 --------------KEGALWFTTSEFGCEKDDVLVRQNGLPTYFMGDIAYHLNKFKTRGF 341

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D  I V G+DH G++ RL+A   A       + +++ +LVRL RDG   +MSKR G+ IT
Sbjct: 342 DRCINVWGADHHGHIARLKAAMQAAGVNPDHLEIVIMQLVRLMRDGEIARMSKRKGEMIT 401

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           L  +++EVG D+ RF+   R     LDFD     EQS ENPVFYVQYA+AR  SI RQ  
Sbjct: 402 LTDLIEEVGRDAARFLFNMRSPDSHLDFDLDLAIEQSNENPVFYVQYAHARICSILRQMA 461

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +       D             +  EL L+  L+  P  I  A    +P ++  Y  DLA
Sbjct: 462 E-------DKNTEGPANLTLLREKEELTLLDMLSNLPNEIIVAEEKMDPSRITHYAMDLA 514

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  ++  R       V+  + +L   RL L+     ++ + L I+G+++P  M
Sbjct: 515 AAFHSFYNACR-------VRVEDIELMKARLALIKGTKQVLANVLEILGIDAPERM 563


>gi|307825835|ref|ZP_07656051.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733143|gb|EFO04004.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 586

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 180/615 (29%), Positives = 308/615 (50%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       +   ++ +     + ++I   I I+R RD  HG  ++N A++L++ +  +P 
Sbjct: 1   MKKKIEELILQAVETLKSNGVLAQEITPNITIDRTRDPQHGDFASNLALMLAKQVNTNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE ++A +  D  +  V +AG GFIN ++ P+   +++  I   G ++G + +G G K
Sbjct: 61  QLAEKLIAALPQDTAIVKVELAGPGFINFFIDPTAQYQVIKQIHDQGPKFGLSNVGAGKK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G  +A L+  +G++V REYY+NDAG Q++ LA S++
Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGSAVADLLQATGFDVHREYYVNDAGRQMDILATSIW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS----------------SELLNFPE 226
            RY +         P   Y G Y++ +   +    +                 E     +
Sbjct: 181 LRYLEEC-GEVVHFPSNAYRGEYVREIAWNIHKNANNEYRRPVELVFEDIPPDEPAGGDK 239

Query: 227 EKWLPI----------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           E+ +                       +  +++ I+ DL    + +  + SE      D 
Sbjct: 240 EEHIDALIARAKTLLGAPLYQDFFQIGLNNILEDIKIDLSEFGVDYQEWFSERRL--MDD 297

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   ++ L   G++YE                      F    +GD+ DR +++ +G 
Sbjct: 298 GSVEKALERLRAAGHLYE----------------KDGATWFACADLGDEKDRVVVRENGQ 341

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   K +RGFD +I + G+DH GY+ R+ A   A+   ++++ VLL +   
Sbjct: 342 STYFASDIAYHMNKLDRGFDQIINIWGADHHGYIPRVRAAIQALGADESKLKVLLVQFAS 401

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    ++MS R+G+F+TLR + +EVG D+ RF  + R++ + +DFD      +S ENP
Sbjct: 402 LYRGEEKVQMSTRSGEFVTLRQLRNEVGKDAARFFYVMRRSEQHMDFDLKLATSKSNENP 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           VFYVQYAYAR  S+ RQ  +   + +    P  +       +  E  L+  LA YP V+E
Sbjct: 462 VFYVQYAYARVCSVLRQLDEKNWERN---LPLGMENLALLTEEHETNLLGTLARYPEVLE 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  EP++L  YL +LA+ FH +++  +           + K+   RL L+ AV  I+
Sbjct: 519 RAALQYEPHQLIQYLRELANEFHTYYNAHQF-------LVEDAKIRNARLNLICAVKQIL 571

Query: 571 NSGLNIIGVESPNEM 585
            +GL+++ + +P  M
Sbjct: 572 ANGLSLLNINTPEAM 586


>gi|283850760|ref|ZP_06368047.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574003|gb|EFC21976.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 552

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 202/579 (34%), Positives = 313/579 (54%), Gaps = 33/579 (5%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S L+  L+ +  +  +      +  IE PRD AHG L+TN A++ ++   + P  +AE +
Sbjct: 5   SHLRGLLETVLRESDIP--WPAKTTIEPPRDKAHGDLATNVALVAAKDAKMPPRALAEHL 62

Query: 69  -VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
             A +  D  +  V +AG GF+N+  +P++ ++ +  ++  G  YG   IG+GTK+ +EF
Sbjct: 63  RQALLAADTGLAEVSVAGPGFLNVTFAPAFWQQTVLDVLEQGDRYGLLDIGQGTKIQVEF 122

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+H+GH R A VGD LA ++  +G+ V  EYYINDAG Q+  L LS+ +RY++
Sbjct: 123 VSANPTGPLHIGHGRGAAVGDCLARVLRAAGFTVETEYYINDAGRQMRILGLSILYRYRE 182

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L       PE YY G Y+K +  +L D+    LL   EE      + +  + ++  IR 
Sbjct: 183 LL-GEPVTEPEDYYRGDYVKDLAGQLIDREGRGLLALSEEAATDACRLHGEKEILAGIRK 241

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL+   + HD++  E          +    D+L  +   Y+                   
Sbjct: 242 DLQDFRVHHDVWFPESKLLA--AGAVERTFDDLRAKNLAYD----------------KDG 283

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
              F +T  GDD DR L+KS G  TYFA+D+AY   K+ RGFD ++ + G+DH GYV R+
Sbjct: 284 AFWFATTTFGDDKDRVLVKSGGELTYFASDIAYHDDKFHRGFDVVVDIWGADHHGYVPRM 343

Query: 368 EAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           +A  AA+     A + V+L +LV L + G  I MS RAG F TL  VV EVG+D+ RFM 
Sbjct: 344 KACVAALGRDPEASLKVILVQLVNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMF 403

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L RK+   LDFD   V ++S +NPV+YVQYA+AR RS+F +A +     D          
Sbjct: 404 LSRKSDSHLDFDLDAVTKKSMDNPVYYVQYAHARVRSVFAKAAERGLVPDAASPALLARL 463

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             +E           L +YP  +  A  +  P+ ++FYL +LA   H +++  +      
Sbjct: 464 DTAEDLELLKL----LEQYPDTVAAAARSFAPHLVSFYLRELAGKLHRYYTVNQ------ 513

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A +  +T  R++L+ AVA ++ +GL ++GV +P++M
Sbjct: 514 VLGAGDEAVTAARMRLLQAVALVVKNGLGLLGVSAPDKM 552


>gi|86157949|ref|YP_464734.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109894970|sp|Q2II14|SYR_ANADE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85774460|gb|ABC81297.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 598

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 227/596 (38%), Positives = 345/596 (57%), Gaps = 28/596 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
              R+    ++   +   + +         +E PRD  HG  + NAAM+L++  G  P  
Sbjct: 2   VRDRVIELFRKALAQGADDGRWPAADAGFSVEAPRDPKHGDFAVNAAMVLAKQAGKPPRE 61

Query: 64  IAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           +A+ IV  +       D+  + IAG GFIN+ LSP    + L+  V  G  YGR  +G+G
Sbjct: 62  LAQAIVEAVRAADTAGDLAGLEIAGPGFINVRLSPDLWLRTLARAVAEGPAYGRTAVGQG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+VSANPTGPMHVGH R AVVGD +  L+ ++G++V+REYY+ND GAQ+ TLA S
Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQGLLRWAGFDVSREYYVNDYGAQVQTLARS 181

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RYQ+ L+     +P   YPG Y+K +   L  +Y +  L+ PE +WL + +D++VQ 
Sbjct: 182 VHLRYQE-LHGRAVTMPPKSYPGEYVKDIAAGLKAEYGARFLDAPEAEWLTLFRDHAVQH 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-- 298
           ++ +IR+DL A+NI  D + SE   +  +   +   +  L  +  VY G LPPPKSK   
Sbjct: 241 VLGMIREDLAAVNISFDRWSSEKALY--ESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQ 298

Query: 299 --------TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                    +         LFRS+  GD+VDRP+ K+DG+ TYF AD+AY   K +R  D
Sbjct: 299 PPPQAQPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYFCADIAYHWDKRQR-AD 357

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++ V+G+DH GYV RLEA   A+   +  ++V+L ++V L R G  +KMSKRAG  ++L
Sbjct: 358 ALVDVLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSL 417

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R VVDEVG D+ RF+ L R++   LDFD    K+Q+ +NPVFYVQY +AR  +IF++A++
Sbjct: 418 REVVDEVGRDATRFIFLTRRSDAPLDFDVELAKKQTLDNPVFYVQYGHARLAAIFQKARE 477

Query: 471 IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               + +FDL     +         E  LI  +A +P ++  A +A EP+++AFYL +  
Sbjct: 478 AGHAVPEFDLDAARTLG-----SPEEQDLIRRIAAFPDLLAAAALAYEPHRVAFYLQETI 532

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + FH  ++ G+++     V   +   T  RL L  A+  ++ +GL ++GV +P+ M
Sbjct: 533 AAFHSWYTQGKKSGEK--VIGPDPVKTAARLFLCRALKQVLANGLAVLGVSAPDRM 586


>gi|319944918|ref|ZP_08019180.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319741488|gb|EFV93913.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 575

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 196/597 (32%), Positives = 305/597 (51%), Gaps = 50/597 (8%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           + L+  L      I VE ++   +   +ERPR   HG L+TN AM L+RPL   P  +AE
Sbjct: 7   NELRQLLAHTMQAIGVEAELAASVTPSLERPRQADHGDLATNLAMQLARPLKKSPRAVAE 66

Query: 67  LIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +VA +   P     +    IAG GFIN  L+P+  ++++  ++  G ++G+     G +
Sbjct: 67  QLVAALMEQPGATDLIAQAEIAGPGFINFRLTPAAHQRVVHEVLTQGEQFGQQ-PSNGQQ 125

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A +GD L +L+A  G++V RE+Y NDAGAQI+ LALSV 
Sbjct: 126 VMLEFVSANPTGPLHVGHGRQAALGDVLGNLLASQGWKVHREFYYNDAGAQIHNLALSVQ 185

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------KWLPIVKDY 236
            R  + +  +D   P   Y G Y+  + +    + + ++   P E        L  V+ +
Sbjct: 186 AR-GRGISPDDPSFPADGYRGDYIAEIARAFVARETVQVNGQPPETATGDLDDLDAVRRF 244

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  + +    DL A  +  D +  E   +      + + +  L   G+ +E        
Sbjct: 245 AVACLRREQDLDLAAFGVSFDRYYLESSLYT--DGKVEEAVARLVAGGHTFE-------- 294

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L  R+T  GDD DR + KS+G YTYF  D+AY   K++RGF   I + 
Sbjct: 295 --------QDGALWLRTTDYGDDKDRVMRKSEGGYTYFVPDVAYHLGKWQRGFTQAINIQ 346

Query: 357 GSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           GSDH G V R+ A   A  +   K   + +L ++VR+ R+G  +K+SKRAG ++TLR ++
Sbjct: 347 GSDHHGTVARVRAGLQALDMGIPKGYPDYVLHKMVRVMRNGEEVKISKRAGSYVTLRDLI 406

Query: 415 DE-------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +         G D+VRF ++ RK      FD      +S ENPV+YVQYA+AR  SI  Q
Sbjct: 407 EWSGGGDETRGRDAVRFFLISRKGDTEFTFDVDLALSRSDENPVYYVQYAHARICSILAQ 466

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A +              I  +     +E  L+  +A +P ++  A     P++LA+YL D
Sbjct: 467 AAERGGQSAGAEGRGAHI--DRLTAPTEYALMARMAAFPAMLTEAARELAPHQLAYYLKD 524

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LA+ FH  ++  R       V  ++ +L   R+ L+ AV +++  G+ +IGV +P  
Sbjct: 525 LAADFHAFYNAER-------VLVDDAELQSARMALLEAVRTVLRRGMALIGVSAPER 574


>gi|113866190|ref|YP_724679.1| arginyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134540|sp|Q0KFB0|SYR_RALEH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113524966|emb|CAJ91311.1| Arginyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 595

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 192/615 (31%), Positives = 294/615 (47%), Gaps = 64/615 (10%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S L     +    +      L  +  ERP+  AHG L+ N AM ++R L  +P  +A+ I
Sbjct: 7   SNLAAAFTDAVRALAPADATLPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRI 66

Query: 69  VARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           V  ++ D      V ++ IAG GFINL L+P+    +L +++  G  YG    G   +V 
Sbjct: 67  VDAVQADTRAQGLVQAMEIAGPGFINLRLTPAAKADVLRAVLAEGDHYGARERGVHGQVL 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV  R
Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR 186

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238
            +  L   D+  PE  Y G Y+  +  +              +      + +  ++ ++V
Sbjct: 187 AR-GLKPGDASWPEAAYNGDYIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAV 245

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +      DL+A  ++ D +  E   +      +   + +L  +G  YE          
Sbjct: 246 TYLRNEQDIDLQAFGVKFDRYYLESSLY--SDGRVEAAVQSLVGKGKTYES--------- 294

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +I V GS
Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGS 347

Query: 359 DHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           DH G + R+ A      +   +   + +L ++V + ++G  +K+SKRAG ++T+R +++ 
Sbjct: 348 DHHGTIARVRAGLQGLDMGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                    G D+VRF +L RK      FD     +Q+ ENPV+
Sbjct: 408 SNGGDETIRGCLDTGVADWPQHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPRVIE 510
           YVQYA+AR  SIF        +          +   +  E       L   LAE+P ++ 
Sbjct: 468 YVQYAHARICSIFESWGGADWEARLAELAGADLSAVTGPEASAQAQALGRRLAEFPDMLS 527

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++
Sbjct: 528 GAAAELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVL 580

Query: 571 NSGLNIIGVESPNEM 585
            +GL +IGV +P  M
Sbjct: 581 RNGLAVIGVSAPRRM 595


>gi|109940178|sp|Q8PFR2|SYR_XANAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 193/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ ++A +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G 
Sbjct: 61  RALAQALLAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV
Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236
             R  Q L  +    PE  Y G Y+  V          D     +    +   L  ++ +
Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE        
Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                   +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +
Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341

Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TLR ++
Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++    
Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA  FH 
Sbjct: 462 YDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + +       V  +       +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 WYHNSK-------VLVDAAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562


>gi|257784334|ref|YP_003179551.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472841|gb|ACV50960.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 614

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 192/633 (30%), Positives = 316/633 (49%), Gaps = 69/633 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       ++  L E     ++ +  +D + +ERP+D ++G  S+  AM  ++     P 
Sbjct: 1   MREKIEELVRQALAEAQAAGELPEFQIDDVGLERPQDSSNGDWSSTVAMRSAKLAHKAPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +VA I  D  ++ V +AG GF+N YLS +   +I +++   G ++GR+  G G K
Sbjct: 61  DIAAALVAHIVKDAQIERVEVAGPGFVNFYLSTAAGNEIFNTVRKQGADFGRSSFGSGQK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+VSANP GP+H+GH R A +GD+L+ ++AF+GYEV REYY+ND G+Q++    S+ 
Sbjct: 121 VQVEYVSANPVGPLHIGHGRWAALGDSLSRILAFAGYEVEREYYVNDHGSQMDVFGHSIS 180

Query: 183 WRYQQAL-------------------------YNNDSDLPEGY--------------YPG 203
            RY Q +                          + D   PE +              Y G
Sbjct: 181 KRYLQLIDIMQKRGIDADTAAQVLAEDRNAYVADEDDAHPEEHPFTDEFINSLGGNAYAG 240

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y+  +G            N  E++ +   ++   + M++ I+          D++ SE 
Sbjct: 241 DYIVDLGLFFLKNDGELWANKSEDERMVEFRERGYKMMLESIKKTCHNARADFDVWFSER 300

Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
             +  D      +   +D L + GY+Y                 D   L FRST  GDD 
Sbjct: 301 SLYVKDSQGKDAVDRALDALDKLGYLYRS---------------DEGALFFRSTDFGDDK 345

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+K++G YTYFA+D+AY   K++R  D++I + G+DH GY++R+ + A A+     Q
Sbjct: 346 DRVLIKTNGEYTYFASDVAYHWNKFQR-VDHVIDIWGADHHGYIQRVRSAATALGY-PTQ 403

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             VLL +LV L R+G+ ++MSKR G  I    ++ EVG D+ R+ ++ + +++++DFD  
Sbjct: 404 FEVLLGQLVNLLRNGVAVRMSKRKGTGIHFDELLAEVGVDATRYTLVSKSSNQMIDFDIE 463

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ--------AKDIFPDLDFDLFPRNVIPQESEFD 492
           +VK Q   NPV+YVQYA+AR  SI R+        AK +  D        +V+      D
Sbjct: 464 QVKRQDSSNPVYYVQYAHARICSILRRAAGIDLEEAKTLGMDAVASKAIGSVVDLGLLSD 523

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +E  L   L E+P +IE+    + P+++  Y+ +LA  FH  ++  +  P        +
Sbjct: 524 AAEQALARKLFEFPGLIESCARDRAPFRITHYIEELAGQFHAFYTVCQVLPSEGRPL--D 581

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L+  RL    A   ++   LN+IGV +P  M
Sbjct: 582 TELSKARLAACDATRRVLAIALNLIGVSAPEVM 614


>gi|297570951|ref|YP_003696725.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931298|gb|ADH92106.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 557

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 187/587 (31%), Positives = 309/587 (52%), Gaps = 41/587 (6%)

Query: 6   DFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +    + N +++      I ++ + L  + +ERPR   HG  +TN AM L +  G++P  
Sbjct: 5   ELKVLIGNIIRDAAVAGTIALDPETLPEVRVERPRVREHGDWATNVAMQLGKKAGMNPRE 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            A+L+V ++  DP VD   IAG GFIN+ ++ +   ++  +I+  G  +G     KG  +
Sbjct: 65  FAQLVVDKLIEDPGVDHADIAGPGFINITVNAAVAGELARTILEKGEAFGLGESLKGDVI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+E+VSANPTGP+H+G  R A VGD+LA ++  SG  V REYY ND G+QI+  A S+  
Sbjct: 125 NLEYVSANPTGPIHIGGARWAAVGDSLARILEASGARVIREYYFNDHGSQIDRFAKSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSVQAM 241
           R +        + PE  Y G Y++ + + + ++    S+ L   +E+     +++ V  M
Sbjct: 185 RARGL------EAPEDGYGGQYIEDIARAVLEEKSNGSDPLALADEQAQEFFREHGVTRM 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              I+ +L    ++ D++  ED  H  +   +   ID+L  +G +YE             
Sbjct: 239 FGEIKKELADFRVEFDVYFHEDSLH--ESGAVNQAIDDLRNKGVIYE------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     RST  GDD DR ++KSDG   YFA D+AY+  K ERG D++I ++G+DH 
Sbjct: 284 ---QDGATWLRSTDFGDDKDRVIIKSDGDAAYFAGDIAYYLNKRERGADHVIIMLGADHH 340

Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           GY+ R+ A+A A  +   +   + +L+ +LV L +DG P++MSKRAG  + L  +VD  G
Sbjct: 341 GYIGRMYAMARAFGDTAGKGENLELLIGQLVNLVQDGQPVRMSKRAGTIVVLSDLVDAAG 400

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ ++       L+ D   +  ++ ENPV+YVQYA+AR +S+   A          
Sbjct: 401 VDAARYSLVRAAMDTTLEIDLGLISSRTNENPVYYVQYAHARTKSVDANAASHG------ 454

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              R V         ++ +LI  LA++P ++  +   +EP+++A YL +LA  +H  +  
Sbjct: 455 -VTREVFTPALLDSAADSELIAKLAQFPEIVAQSAQLREPHRVARYLEELAGAYHAWYGA 513

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  PR          L   RL L  A   ++ +GL+++GV +P +M
Sbjct: 514 SRVTPR---ADEEVSDLHRTRLWLNDAAGQVLANGLSLLGVSAPEKM 557


>gi|94309041|ref|YP_582251.1| arginyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123260476|sp|Q1LS94|SYR_RALME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|93352893|gb|ABF06982.1| Arginyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 602

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 192/615 (31%), Positives = 299/615 (48%), Gaps = 64/615 (10%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S+L     +    +      L  +  ERP+  AHG L+ N AM +++ L  +P  +A+ +
Sbjct: 7   SQLAAAFTDAVRALAPADANLPAVTFERPKAAAHGDLACNIAMQVAKSLKTNPRELAQKV 66

Query: 69  VARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           V  +K D      V ++ IAG GFINL LSP    ++L +++  G  YG   +G+  +V 
Sbjct: 67  VDAVKADSRATALVAALEIAGPGFINLRLSPEARAEVLRAVLADGDRYGARPVGEHGQVL 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD LA+L+A+ G+ V RE+Y NDAG QI+TLA+SV  R
Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLAWQGWSVHREFYYNDAGVQIHTLAISVQAR 186

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238
            +  L   D+  PE  Y G Y+  +  +              +      + L  ++ ++V
Sbjct: 187 AR-GLKPGDAGWPESAYNGDYIADIAADFLAGKTVSASDGEPVTASGNIEDLESIRKFAV 245

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +      DL+A  ++ D +  E   +      +   + +L  +G  YE          
Sbjct: 246 TYLRNEQDIDLQAFGVKFDRYYLESSLY--SDGRVEAAVQSLIAKGKTYES--------- 294

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR + K DG+YTYF  D+AY   K+ERGF  +I V GS
Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKGDGTYTYFVPDVAYHTTKWERGFSKVINVQGS 347

Query: 359 DHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           DH G + R+ A    +     +   + +L ++V + ++G  +K+SKRAG ++T+R +++ 
Sbjct: 348 DHHGTIARVRAGLQGLDIGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                    G D+VRF +L RK      FD     +Q+ ENPV+
Sbjct: 408 SNGGEETIRGCLEAGVADWPAHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD--TSELQLIVHLAEYPRVIE 510
           YVQYA+AR  SIF        +          +   +  D     + L   LAE+P ++ 
Sbjct: 468 YVQYAHARICSIFEAWGGADWEARLGELASVDLAAVTAADVSPQAIALGRRLAEFPDMLA 527

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A+    P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++
Sbjct: 528 AASSELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDETVKRARLALLAATRQVL 580

Query: 571 NSGLNIIGVESPNEM 585
            +GL +IGV +P  M
Sbjct: 581 KNGLAVIGVSAPQRM 595


>gi|159039563|ref|YP_001538816.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918398|gb|ABV99825.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 554

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 183/583 (31%), Positives = 301/583 (51%), Gaps = 34/583 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ +  +      +  +  +++ +L ++  +ERPR+  HG  ++  A+ LS+ +G+ P  
Sbjct: 4   AELAEVVLTAAHTVLAQRGLDRAMLPEQTAVERPRNAEHGDYASTLALQLSKKVGVPPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +  ++     + SV IAG GF+N+ L  +   ++   IV +G EYGR+    G  +
Sbjct: 64  LAAALADQLGQTVGIKSVEIAGPGFLNIRLDAAAAGQLAQVIVEAGEEYGRSDRLVGQSI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L+ L+  +G EV  EYY NDAG+QI+  A S+  
Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGAEVGTEYYFNDAGSQIDRFARSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G YL  + +++  +   ++L   +     + +   V+ M  
Sbjct: 184 AAK------GEPPPEDGYAGAYLTEIAQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L+   ++ D + +E D H  D   +   ++ L +QG++ E               
Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLH--DRGELELALERLRQQGHISEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T  GDD DR L KS+G +TYFAAD AY+  K ERG++ ++ ++G+DH GY
Sbjct: 281 --DGATWLRTTHFGDDKDRVLRKSNGEWTYFAADCAYYLDKRERGYERVVLMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           + R++A+ A   +  A  + +L+ ++V L RDG P++MSKRAG  + L  +VD +G D+ 
Sbjct: 339 LGRMKAMVACFGDDPAHNLEILIGQMVNLVRDGAPVRMSKRAGTVVRLEDLVDAIGVDAA 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +        +D D       +++NPV+YVQY  AR  S+ R A ++           
Sbjct: 399 RYALARYSIDSPIDIDIELWTRATRDNPVYYVQYVAARTASVGRNAAEVG----LTRGQP 454

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                E      E +L+  LAE+P V+  A   +EP+++A YL DLA  +H  + + R  
Sbjct: 455 TDFHPELLDHDKENELLKALAEFPAVVATAAELREPHRIARYLEDLAGAYHRFYDNCRVL 514

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           PR          L   RL L  A   +I +GL ++GV +P  M
Sbjct: 515 PRG---DEEITDLHRARLWLNDATRVVIANGLRLLGVSAPERM 554


>gi|172040372|ref|YP_001800086.1| arginyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171851676|emb|CAQ04652.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 569

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 190/583 (32%), Positives = 301/583 (51%), Gaps = 34/583 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ S  +    +E+  +  ++  +  D   +ERPR+  HG  +TN AM  ++  G +P  
Sbjct: 19  AELSEFIARIAREVLTERGLDASVVPDNPTVERPRNPEHGDYATNVAMQTAKKAGTNPRE 78

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +  ++   P++D   +AG GFIN+ L+ +   KI+ +I+ +G ++GR    KGTK+
Sbjct: 79  LGTWLAEKLAASPEIDEASVAGPGFINIRLAAAAQGKIVENILAAGQDFGRGDAYKGTKI 138

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  L+A  G EVTREYY ND G QI+  A S+  
Sbjct: 139 NLEFVSANPTGPIHLGGTRWAAVGDSLGRLLAAQGGEVTREYYFNDHGGQIDRFAKSLLA 198

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ +  ++  + +       +     + +   V+ M  
Sbjct: 199 AARN------EPTPEDGYGGQYIQDIAAQVV-EANPTWGELSDADAQELFRAQGVELMFD 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  LK    + D+F  E+     +   +   I+ L   G +YE               
Sbjct: 252 HIKTTLKQFGTEFDVFFHENSLF--ESGAVDKAIEELKSNGNLYEA-------------- 295

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSDG+  Y A D+AY   K  RG D  IY++G+DH GY
Sbjct: 296 --DGAWWLRSSDFGDDKDRVVIKSDGNAAYIAGDIAYIADKINRGHDLCIYMLGADHHGY 353

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+     Q+ V++ ++V L RDG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 354 IARLQAAAAALGYDPQQVEVMIGQMVNLVRDGEAVRMSKRAGTIITLDDLVEAIGVDAAR 413

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D      QS ENPVFYVQYA+AR  S+ R+A +    +DF     +
Sbjct: 414 YALIRSSVDSSLDIDMDLWASQSNENPVFYVQYAHARLCSLQRKADEQG--VDFAGADLS 471

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E       LI  L E+P+V+  A   +EP+++A Y   LA  FH  +   +  P
Sbjct: 472 LLTHDREG-----TLIRSLGEFPKVVRTAAELREPHRIAHYAEKLAGDFHRFYDACQVLP 526

Query: 544 RLRFVQANNRK-LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +   +   RL L  A   ++ + L+++GV +P  M
Sbjct: 527 KADEPTGTDAAPVFHARLALAAATRQVLENALSLVGVSAPERM 569


>gi|313902824|ref|ZP_07836221.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466944|gb|EFR62461.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 566

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 191/595 (32%), Positives = 300/595 (50%), Gaps = 41/595 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR----------IVIERPRDCAHGHLSTNAA 50
           M   A    +++  L+          ++             + +E PRD  HG  ++NAA
Sbjct: 3   MDPVAAARQQVRQALESAAAAAVAAGELPGEAAPGTEAWRGVQVEVPRDPRHGDFASNAA 62

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           ++L+      P  +A ++   +     +  V  AG GF+N +L+  + R+ + +I+ +G 
Sbjct: 63  LVLAGRARRAPREVAAVLERHLPGGAWLRKVEAAGPGFLNFHLADDWWREGVRAILRAGE 122

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            +GR   G G +V +EFVSANPTGP+ V + R A +GD LA ++  +GY V +E+Y+NDA
Sbjct: 123 AFGRTDRGGGLRVQVEFVSANPTGPLGVVNARAAALGDALARVLQAAGYRVEKEFYLNDA 182

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G QI  LALS+  R +Q L    +++PEG YPG YL  + ++L       LL+ PEE+  
Sbjct: 183 GNQIRKLALSLEARMRQEL-GQPAEIPEGGYPGEYLIDIARDLLAAEGPALLDRPEEERW 241

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  ++V+A++  +R  L    ++ D +  E      +      +++ L ++G VYE  
Sbjct: 242 ERMARFAVEAIVAQMRTQLARFGVEFDEWYPETRV--REAGYPERVLERLRQRGMVYE-- 297

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             L  RS+ VGDD DR L++ DG YTY   D+AY   K+ERGF 
Sbjct: 298 --------------QDGALWLRSSAVGDDKDRVLVRRDGEYTYTLVDIAYHLTKWERGFQ 343

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
             I + G DH G+V  ++A   A+        VLL ++V L R G  ++MSKR G+ +T+
Sbjct: 344 RAIDIWGQDHHGHVVPMQAALRALGLPDGWFEVLLTQMVHLVRGGQAVRMSKRRGELVTM 403

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
              +DEV  D+ R+  L R     LDFD      +S ENPV+YVQYA+AR   I RQA  
Sbjct: 404 AEFLDEVDVDAARYFFLMRSPDTHLDFDLDLANLRSSENPVYYVQYAHARACGILRQA-- 461

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              + +  L P          D +E  L   L + P  +  A  A+EP++L +YL D+A+
Sbjct: 462 ---EAEAGLRPDGSADLSPLGDPAERDLARRLLDLPGEVAAAAEAREPHRLTYYLKDVAT 518

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +FH  ++  R       V      +   RL LV A   ++ + L ++GV +P  M
Sbjct: 519 LFHQFYTRCR-------VLGEEDPVARARLVLVDATRQVLATALGLLGVTAPERM 566


>gi|302877425|ref|YP_003845989.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302580214|gb|ADL54225.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 558

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 192/592 (32%), Positives = 314/592 (53%), Gaps = 41/592 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +  +F S +     E   ++  E+  +  ++IERP+  +HG  + N AM L++PL   
Sbjct: 1   MSVVLNFKSHITELFVEAMREVAPEQGSVS-VLIERPKQASHGDYACNLAMQLAKPLRKS 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  ++A +     ++ V IAG GFINL+++ +  + I+ +++ +G  YG   +G+G
Sbjct: 60  PRDIAHALIAALPKSDVIEKVEIAGAGFINLFVTHAAKQAIVHAVLHAGAGYGHLHVGQG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +EFVSANPTGP+HVGH R A VGD L +++  +G+ VTRE+Y NDAGAQI+ L  S
Sbjct: 120 RRVQVEFVSANPTGPLHVGHGRGAAVGDCLCNVLQAAGWNVTREFYYNDAGAQIDNLMRS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKD 235
           V  R  + +  +D   PE  Y G Y+  V +     E  +          +   +  ++ 
Sbjct: 180 VQLRC-KGITPDDPSWPEAGYRGDYIADVARAYMACETVEADDQRTTGCGDVDDVVAIRH 238

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DL+A +++ D+F  E   +      + + +  L   G+ YE       
Sbjct: 239 FAVAYLRREQDLDLRAFHVEFDVFSLESALY--SEGKVDETVAGLIASGHTYE------- 289

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  R+T  GDD DR + KSDG YTYF  D+AY   K+ RGF  +I  
Sbjct: 290 ---------QDDALWLRTTDFGDDKDRVMRKSDGGYTYFVPDVAYHLDKWRRGFVRVINE 340

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G+DH   + R+ A   A+     K   + +L ++V + ++G  +K+SKRAG ++TLR +
Sbjct: 341 QGADHHSTITRVRAGLQALDVGIPKGWPDYVLHQMVTVLKNGEEVKISKRAGSYVTLRDL 400

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DEVG D+ R+ +  R     L FD    K +S +NPV+Y+QYA+AR  ++     + + 
Sbjct: 401 IDEVGCDATRYFLAARHPDSQLVFDIDLAKSKSNDNPVYYIQYAHARISTVL----ETWG 456

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                L   NV   +SE+   E  L+  + +YP+VIENA     P+ +AFYL +LA+ FH
Sbjct: 457 GERLSLLNANVSLLDSEY---ETALLQQIIDYPQVIENAAQELAPHLIAFYLKELAAAFH 513

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++  R           +  +   RL L+ A A ++ +GL ++GV +P +M
Sbjct: 514 SYYNASRF-------LVEDEAVKCARLALIAAAAQVMKNGLALLGVGAPEKM 558


>gi|325066827|ref|ZP_08125500.1| arginyl-tRNA synthetase [Actinomyces oris K20]
          Length = 561

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 190/587 (32%), Positives = 308/587 (52%), Gaps = 37/587 (6%)

Query: 6   DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           + ++ ++  L+E   +    +    +    +ERPR+  HG  STN AM L++     P  
Sbjct: 5   ELAAAIRTVLEEASAEGSLALPAAEIPAPRVERPRNRDHGDWSTNVAMQLAKKASTKPRD 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AEL+V R++    + SV +AG GF+N+ L  +   ++  SIV +G  YGRN    G  +
Sbjct: 65  LAELLVPRLEALDGIASVEVAGPGFLNIRLDAASAGELARSIVEAGQAYGRNDSLSGQHI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+E+VSANPTGP+H+G  R A VGD+LA +++  G +VTREYY ND G QI+  A S+  
Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGAQVTREYYFNDHGTQIDRFARSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239
             +        + PE  Y G Y+  + +++ AD+ ++   +    P+ +   + +   V 
Sbjct: 185 SAR------GQETPEDGYGGAYISEIAQQVTADELAAGRPDPATLPDAEATEVFRSRGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   ++ +L A     D+F  ED  H      +   I  L  +G +             
Sbjct: 239 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAIARLRERGVI------------- 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +        R+T  GDD DR L+KSDG+  YFAADLAY+  K ERG D  +Y++G+D
Sbjct: 284 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGADCAVYLLGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H GY+ R+ A+ AA  +     + +L+ +LV L R+G+P++MSKRAG  +TL  +VD VG
Sbjct: 341 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTIVTLEDLVDAVG 400

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +       ++D D   +     +NPV+YVQYA+AR R++ R A +     D +
Sbjct: 401 VDAARYALARSSMDSMIDIDLDLLASSISDNPVYYVQYAHARTRNVARNAAEHGVSRDPN 460

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             P      +   D ++  L+  LA++P  +  A   +E +++A YL  LA+ +H  +  
Sbjct: 461 EAPFEPGALD---DPADAALLGVLAQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGA 517

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  PR      +     + RL L  AV  ++ +GL+++GV +P  M
Sbjct: 518 TRVTPRGDDAVDSG---HVARLWLNDAVGQVLANGLDLLGVSAPERM 561


>gi|329945378|ref|ZP_08293141.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328529000|gb|EGF55931.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 570

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 192/587 (32%), Positives = 309/587 (52%), Gaps = 37/587 (6%)

Query: 6   DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           + ++ ++  L+E   +    +    +    +ERPR+  HG  STN AM L++  G  P  
Sbjct: 14  ELAAAIRTVLEEASAEGSLALPAAEIPDPRVERPRNRDHGDWSTNVAMQLAKKAGTRPRD 73

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AEL+V R++    V SV +AG GF+N+ L  +   ++  SIV +G  YGRN    G  +
Sbjct: 74  LAELLVPRLEALDGVASVEVAGPGFLNIRLDAASAGELARSIVEAGEAYGRNDSLSGQHI 133

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+E+VSANPTGP+H+G  R A VGD+LA +++  G  VTREYY ND G QI+  A S+  
Sbjct: 134 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGARVTREYYFNDHGTQIDRFASSLLA 193

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239
             +        ++PE  Y G Y+  + +++ AD+ ++   +    P+ +   + +   V 
Sbjct: 194 SAR------GQEIPEDGYGGAYIGEIAQQVTADELAAGRPDPATLPDAEAAEVFRARGVD 247

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   ++ +L A     D+F  ED  H      +   I  L  +G +             
Sbjct: 248 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAIARLRERGVI------------- 292

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +        R+T  GDD DR L+KSDG+  YFAADLAY+  K ERG D  +Y+ G+D
Sbjct: 293 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGTDCALYLFGAD 349

Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H GY+ R+ A+ AA  +     + +L+ +LV L R+G+P++MSKRAG  +TL  +VD VG
Sbjct: 350 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTVVTLEDLVDAVG 409

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +       ++D D   +   + +NPV+YVQYA+AR R++ R A +     D  
Sbjct: 410 VDAARYALARSSMDSMIDIDLDLLASSTSDNPVYYVQYAHARTRNVARNAAEHGVSRDPK 469

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           + P      +   D ++  L+  LA++P  +  A   +E +++A YL  LA+ +H  +  
Sbjct: 470 VAPFEPAALD---DPADTALLGVLAQFPATVAQAASLREQHRVARYLEQLAAAYHTWYGA 526

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  PR     ++     + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 527 TRVTPRGDDAVSSG---HVARLWLNDAVGQVLANGLGLLGVTAPERM 570


>gi|261856695|ref|YP_003263978.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837164|gb|ACX96931.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 588

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 188/616 (30%), Positives = 315/616 (51%), Gaps = 61/616 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A    RL N ++ +  +  ++  I     +  P+D +HG  +TN A+ +++P+G+ P 
Sbjct: 1   MKAQIELRLLNAVRLMQEQGVMDAAINVTPALTVPKDPSHGDFATNIALQIAKPMGVPPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A+ ++  +     +  + IAG GF+N ++ P+    ++ +I+ +G  +G +  G+G K
Sbjct: 61  VAAQCLLEALTDREGIKQIEIAGPGFLNFFVDPAAAFALIDTILAAGGTFGHSRFGEGKK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G  +A L+A  G++V REYY+NDAG Q++ LA+S++
Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGAVVADLLAAVGFDVYREYYVNDAGRQMHILAVSIW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSELLNFPE--------------- 226
            RY +A        P   Y    Y+  + K L  ++   +    E               
Sbjct: 181 LRYLEAC-GAKLTFPANGYKSEAYIFDIAKALKTEHGDTMFVSTEDVFTNLPPDEPQGGD 239

Query: 227 -----------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                            E     V D  + +++  IRDDL+   ++++ + SE      D
Sbjct: 240 KDVYIDTLIERAKTLLGETRYRTVFDAGLNSILADIRDDLREFGVEYEQWYSEQTLE--D 297

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I   I  L  +G +YE                    L F+ST  GDD DR + + +G
Sbjct: 298 RGLIDRAIAKLEERGQIYE----------------KEGALWFKSTEFGDDKDRVVRRDNG 341

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TYFA+D+AY   K+ERGFD +I + G+DH GYV R++A   A+   +++++V L +  
Sbjct: 342 QSTYFASDIAYHMEKFERGFDRVIDIWGADHHGYVPRVKAALTALGFDESRLDVSLVQFA 401

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            LYR G  ++MS R+G F+TLR +  EVG+++ RF  + R  ++ LDFD    K QS +N
Sbjct: 402 ILYRGGERVQMSTRSGSFVTLRELRQEVGNEAARFFYVMRAAAQHLDFDLDLAKSQSNDN 461

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P++Y+QYA+AR  S+FRQ        D +             ++ E  L   L+++   +
Sbjct: 462 PLYYIQYAHARVCSVFRQLPLRGFTHDAENGRSA---YARLTESHEQALFKRLSQFGDTV 518

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A +  EP+ +  YL +LA  FH +++         F+ A++  L   RL L+ A   +
Sbjct: 519 QRAAVNLEPHLIVHYLRELAQDFHAYYNAHA------FLVADDAPLRDARLNLIAATRQV 572

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++G+ +P EM
Sbjct: 573 LANGLALLGMSAPEEM 588


>gi|220904017|ref|YP_002479329.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782958|sp|B8IYS4|SYR_DESDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219868316|gb|ACL48651.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 550

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 200/579 (34%), Positives = 319/579 (55%), Gaps = 35/579 (6%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             L+  L  I  +  +      + VIE PRD  HG LS N+AM+L+R    +P  +A+  
Sbjct: 5   ETLRTALAAIIEEEGL--AWPSKTVIEPPRDPRHGDLSVNSAMLLAREAKTNPRELAQKF 62

Query: 69  VARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
            AR+ +  PDV+    AG GF N+  S ++ R+ ++ I  +G  YG +    G +V +E+
Sbjct: 63  AARLLERCPDVEKAEAAGPGFCNVTFSQAFWRQTVTDIESAGQAYGESRE-PGRRVLLEY 121

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGP+HVGH R A VGD+LA L+  +G+ V  EYYINDAG Q+  L LSV+ R  +
Sbjct: 122 VSANPTGPLHVGHGRGAAVGDSLARLLRKAGHHVHTEYYINDAGRQMRLLGLSVWLRVLE 181

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L     + PE YY G Y+  + +E+    +  L + P  +   +  + ++  ++  I+D
Sbjct: 182 -LAGRPVEWPEDYYRGDYIIDIAREML-TANPALPDMPAPEGEDLCYEKAMTDILNGIKD 239

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL+   ++H  + SE      +   +      L + GY YE                   
Sbjct: 240 DLRDFRVEHLRWFSEKTLV--ETGAVDAAFAALGKSGYTYE----------------QDN 281

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
              F +  +GDD +R L KSDGS TYFA+D+AY   K+ERG+D +I V G+DH GY+ R+
Sbjct: 282 AFWFATEQLGDDKNRVLKKSDGSLTYFASDIAYHHDKFERGYDWLIDVWGADHHGYIPRM 341

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            A   A+ +++   +V+L +LV L R+G P+ MS RAG F TL  V+ EVG+D+ RFM L
Sbjct: 342 RAAITAMGKERDSFDVVLIQLVNLLREGQPVSMSTRAGTFETLADVIKEVGTDAARFMFL 401

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            RK+   LDFD    K++S +NPV+YVQYA+AR  ++ R+A +      F L  ++    
Sbjct: 402 SRKSDSPLDFDLELAKQRSLDNPVYYVQYAHARICAVLRRAAERG----FVLPEKSDAAL 457

Query: 488 ESEFDTSE-LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +  DT+E + L+   A +  ++  A  +   + ++ YL +LA + H +++  +      
Sbjct: 458 LAPLDTAEDMTLLRKAAAFEDMLFAAAQSLGVHHVSHYLTELAGLLHSYYARHQ------ 511

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A++   T+ RL L+ +V  ++ +GL+++GV +P  M
Sbjct: 512 VLLADDAPRTLARLALLRSVGQVVRNGLDVLGVSAPESM 550


>gi|254207373|ref|ZP_04913724.1| arginyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|147752915|gb|EDK59981.1| arginyl-tRNA synthetase [Burkholderia mallei JHU]
          Length = 578

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 195/591 (32%), Positives = 307/591 (51%), Gaps = 62/591 (10%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFI 83
           +L  I +ERP+  AHG ++ N A+ L++PLG +P  +AE IVA +   P+    VD+  I
Sbjct: 17  VLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQIVAALTAQPEAAGLVDAAEI 76

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           AG GFINL L+P+  + ++ +++  G  +G +      +V +EFVSANPTGP+HVGH R 
Sbjct: 77  AGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQ 136

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A +GD LA+++A  GY V RE+Y NDAG QI  LA+S   R +  L   D+  PE  Y G
Sbjct: 137 AALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQARAR-GLKPGDAGWPEAAYNG 195

Query: 204 VYLKHVGKEL------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
            Y+  + ++       A      +    + + L  ++ ++V  + +    DLKA  ++ D
Sbjct: 196 EYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFD 255

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E   +      +   +D L   G  YE                    L  R+T  G
Sbjct: 256 QYYLESSLYT--EGRVEKTVDALIAAGMTYE----------------QEGALWLRTTDEG 297

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--S 375
           DD DR + K+DG+YTYF  D+AY   K+ERGF  +I + GSDH G + R+ A    +   
Sbjct: 298 DDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIG 357

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
             K   + +L ++V + RDG  +K+SKRAG ++T+R +++                    
Sbjct: 358 IPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEAT 417

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
              G D+VRF ++ RK      FD     +Q+ ENPV+YVQYA+AR  S+  + K  +  
Sbjct: 418 ITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGA 477

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D  L   ++ P +S+     + L+  LAEYP V+ +A     P+ +AFYL +LAS FH 
Sbjct: 478 TDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHS 534

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V  + +     R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 535 FYNAER-------VLVDEQAPRTARVALLAATRQVLENGLAMLGVSAPSKM 578


>gi|119715977|ref|YP_922942.1| arginyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536638|gb|ABL81255.1| arginyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 522

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 191/554 (34%), Positives = 304/554 (54%), Gaps = 34/554 (6%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +ERPR   HG  +TN A+ L +  G++P  +A L+  R++    +  V IAG GF+N+ 
Sbjct: 2   TVERPRSKEHGDYATNVALQLGKKAGMNPRDLATLVQQRLEQTDGIAGVDIAGPGFLNIT 61

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++      + + IV +G  YG   + +G +VN+EF+SANPTGP+H+GH R AVVGD ++ 
Sbjct: 62  VAAGAQGIVAAEIVDAGAAYGHTDVLRGERVNVEFISANPTGPLHLGHTRWAVVGDAISR 121

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++   G  VTRE+YIND G Q++    S+               P+  Y G Y+  + ++
Sbjct: 122 VLEAGGATVTREFYINDRGNQMDLFGASIEAAALGK------PTPDDGYHGGYIADLARQ 175

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +  +    +L  P+E+ L   ++      +   ++ L   N   D++ SE   H  D   
Sbjct: 176 IVAE-DPAILELPDEERLVAFREQGYALQLAQQQEQLARFNTVFDVWFSERSLH--DSDD 232

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +D L  QG++YE                D   L  R+T  GDD DR L++S+G  T
Sbjct: 233 VAAGLDKLRAQGHLYE----------------DDGALWMRTTDFGDDKDRVLIRSNGELT 276

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRL 391
           YFA+D AY+  K ERGFD  IY++G+DH GYV RL+A+AA   +   + I VL+ +LV++
Sbjct: 277 YFASDTAYYVNKRERGFDRCIYLLGADHHGYVGRLKAMAACAGDDPERNIEVLIGQLVKI 336

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            R G  +++SKRAG+ ++L  ++DE+G+D++R+ +        L  D  ++ +QS ENPV
Sbjct: 337 VRGGEEVRLSKRAGEIVSLEELIDEIGTDALRYSLARYPADSPLTLDIAEITKQSSENPV 396

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           FYVQYA+AR  SI R A+D+        F   ++         E +L+  LAE+PRV+  
Sbjct: 397 FYVQYAHARIASILRNAEDLGIAWSTGDFDPALLSH-----PKEGELLRALAEFPRVVAA 451

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   +EP+++A YL D+A V+H  + + R  P           L   RL LV A  +++ 
Sbjct: 452 AAELREPHRVARYLEDMAGVYHRFYDNCRVLPMG---DEQAGDLHRARLVLVAATRTVLA 508

Query: 572 SGLNIIGVESPNEM 585
           +GL+++GV +P  M
Sbjct: 509 NGLDLVGVSAPERM 522


>gi|39932124|sp|Q7W0K0|SYR_BORPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 560

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 184/589 (31%), Positives = 302/589 (51%), Gaps = 49/589 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +L + ++    +   E +   ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV
Sbjct: 8   QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 65

Query: 70  ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   P     +    IAG GFIN  L+P+  + ++ ++      YGR     G KV +
Sbjct: 66  DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A +GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R 
Sbjct: 125 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239
            + +  +  D P   Y G Y+  + ++ A +          +    +   L  ++ ++V 
Sbjct: 184 GRGIAPDAPDYPADGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 243

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +    DL+A  +  D +  E   +      +++ +D L  +G+ YE           
Sbjct: 244 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 290

Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF + + + G
Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 345

Query: 358 SDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SDH G V R+ A    +    K     +L ++V++ R G  +K+SKRAG ++T+R ++D 
Sbjct: 346 SDHHGTVARVRAGLQGLAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDW 405

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  ++   +     ++ 
Sbjct: 406 VGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI- 464

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                            SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  +
Sbjct: 465 ------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWY 518

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  R       V  +   L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 519 NAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 560


>gi|331695512|ref|YP_004331751.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950201|gb|AEA23898.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 547

 Score =  535 bits (1378), Expect = e-149,   Method: Composition-based stats.
 Identities = 188/575 (32%), Positives = 285/575 (49%), Gaps = 42/575 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
             L  +  +      + D + +ERPR+  HG  +TN A+  ++  G++P  +A  +   +
Sbjct: 13  AALDVLADRGLDAAALPDDVGVERPRNPEHGDYATNVALRTAKKAGVNPRDLATWLAEAL 72

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
                + S  IAG GFINL L+      ++  ++ +G  YG      G  VN+EFVSANP
Sbjct: 73  AARDGIASAEIAGPGFINLRLASDAQGAMVGQVLAAGAAYGTGDELAGRSVNLEFVSANP 132

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TGP+H+G  R A VGD L  +++  G  VTREYY NDAG QI+    S+    +      
Sbjct: 133 TGPLHLGGTRWAAVGDALGRILSARGAAVTREYYFNDAGGQIDRFVASLVAAAK------ 186

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
               PE  Y G Y+  +   +    ++E       +   + +   V  M   I+ DL   
Sbjct: 187 GEPAPENGYGGAYIADIAARVV---AAEPGALDSPERDEVFRRVGVGFMFDEIKSDLHDF 243

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               D++  ED  H+     +   +  L   G +YE                       R
Sbjct: 244 GTDFDVWFHEDSLHK--SGAVERSVQELKNSGALYE----------------KDGAWWLR 285

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           ST  GDD DR ++KSDG   Y A D+AYF+ K  RGFD +IY++G+DH GY+ RL+A AA
Sbjct: 286 STEHGDDKDRVVIKSDGRPAYIAGDIAYFRDKRARGFDLLIYMLGADHHGYIGRLKAAAA 345

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A  +  A + VL+ ++V L +DG P++MSKRAG  +T+  +V+ VG D+ R+ ++     
Sbjct: 346 AFGDDPAVVEVLIGQMVNLVKDGTPVRMSKRAGTVVTMNDLVEAVGVDAARYSLIRSSVD 405

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESE 490
            +LD D   +  +S +NPVFYVQYA+AR  S+ R A D+   P ++F L           
Sbjct: 406 SVLDVDLDLLVRRSNDNPVFYVQYAHARLASLARNAADVGLTPGVEFGLLE--------- 456

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E  LI  + E+P V+  A   +EP+++A YL  LAS +H  +   R  P       
Sbjct: 457 -HPREGDLIRTIGEFPEVVRAAAELREPHRVARYLESLASAYHKFYDACRVLP---LGDE 512

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +L   RL L  A   ++ +GL ++GV +P  M
Sbjct: 513 EITELHRARLALCVAARQVLANGLELLGVSAPERM 547


>gi|33598837|ref|NP_886480.1| arginyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|39932125|sp|Q7W2Q2|SYR_BORPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33574967|emb|CAE39631.1| arginyl-tRNA synthetase [Bordetella parapertussis]
          Length = 561

 Score =  535 bits (1378), Expect = e-149,   Method: Composition-based stats.
 Identities = 184/590 (31%), Positives = 302/590 (51%), Gaps = 50/590 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +L + ++    +   E +   ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV
Sbjct: 8   QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 65

Query: 70  ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   P     +    IAG GFIN  L+P+  + ++ ++      YGR     G KV +
Sbjct: 66  DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A +GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R 
Sbjct: 125 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239
            + +  +  D P   Y G Y+  + ++ A +          +    +   L  ++ ++V 
Sbjct: 184 GRGIAPDAPDYPTDGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 243

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +    DL+A  +  D +  E   +      +++ +D L  +G+ YE           
Sbjct: 244 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 290

Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF + + + G
Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 345

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G V R+ A    +     K     +L ++V++ R G  +K+SKRAG ++T+R ++D
Sbjct: 346 SDHHGTVARVRAGLQGLEAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLID 405

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  ++   +     ++
Sbjct: 406 WVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                             SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  
Sbjct: 466 -------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAW 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V  +   L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 519 YNAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561


>gi|320354044|ref|YP_004195383.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122546|gb|ADW18092.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 549

 Score =  534 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 190/583 (32%), Positives = 292/583 (50%), Gaps = 39/583 (6%)

Query: 7   FSSRLKNYL----KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
             S +K  +     E   +    +    R  +E P+    G  STN A++ +      P 
Sbjct: 2   IKSHVKEIVDRCFTEGVKQGYWSEAAGGRYTVEVPKREGQGDFSTNFALVAAGIDKRKPR 61

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A      +     ++ V +AG GFINL+L       +L+ I      +GR+  G   +
Sbjct: 62  DLAAQFAELLGGQSMIERVEVAGPGFINLFLDKKIWVTVLAPIYEQDAHFGRSTNGADRR 121

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+ VGH R AV+GDT+A L+  SGY V REYY NDAG Q+  L  S  
Sbjct: 122 VLVEFVSANPTGPLSVGHGRNAVLGDTIARLLTASGYAVQREYYFNDAGRQMRVLGESTR 181

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY + L   ++  PE  Y G Y+  + + + D+      +      L + K+ + +A+ 
Sbjct: 182 ARYLELLGLANT-FPEDGYQGDYIYDIARAMIDEAGDGFKD----AELAVFKERAQRAIF 236

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I   LK + I  D + +E   +  +   +  +++ L  +  VYE              
Sbjct: 237 ADIDATLKRIGIGFDTYFNEHTLY--EDGRVNQVVEELRAKNLVYE-------------- 280

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                   F++T  G + DR ++KS G  TY   D+AY   K++RG+D MI V GSDH  
Sbjct: 281 --KEGATWFKTTEFGQEQDRVIIKSSGEPTYRLPDIAYHCDKFKRGYDWMINVFGSDHIA 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            V  + A   A+    ++I V+L + V L RDG  +KMS R   F+T+  +VDEVG D++
Sbjct: 339 TVPDVLAGVRALGHDDSRITVVLYQFVTLLRDGKQVKMSTRKATFVTVDELVDEVGPDAL 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF  L RK   L++FD    K+QS+ENPV+YVQYA+AR  SI RQA++   ++       
Sbjct: 399 RFFFLMRKPDNLIEFDLDLAKKQSQENPVYYVQYAHARLCSIERQAREQGVNVG-----T 453

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    +  E  L+  LAEYP+++  A     P+++ FYL DLA  FHG ++  +  
Sbjct: 454 PDQILARLAEPEEYGLLKTLAEYPQLVAGAAADLAPHRVVFYLMDLAGQFHGFYNKHK-- 511

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                V  ++ +L+  RL L  A+  +  +GL +IG+ +P  M
Sbjct: 512 -----VLGDDPELSRARLYLCGALKRVFRNGLTLIGLRAPETM 549


>gi|295099684|emb|CBK88773.1| arginyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 544

 Score =  534 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 210/576 (36%), Positives = 311/576 (53%), Gaps = 38/576 (6%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            LK  +KE   K    +   + IVIE P+   HG  STN AM L+R L  +P  IAE IV
Sbjct: 7   ELKQAIKEAVKKAFDIELEENNIVIETPKVKDHGDFSTNVAMQLTRQLRQNPRMIAEKIV 66

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           A I+   +V+ + IAG GFIN  LS     K++  ++     +G+     G KVN+E+VS
Sbjct: 67  ANIE-SENVEKMDIAGPGFINFILSKGRFTKVIEEVLSKRENFGQQ-PSNGIKVNLEYVS 124

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTG +H+GH R A  GD+ A +M  +GY+VTREYY+NDAG QI  LALS+  RY+QA 
Sbjct: 125 ANPTGSLHLGHARGAAWGDSCARIMKKAGYDVTREYYVNDAGNQITNLALSLNARYRQA- 183

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +  ++++ +  Y G  +K   ++LA  Y  + L  P E+ L   +   ++  +  I+ DL
Sbjct: 184 HGIETEIGQDGYLGEDVKQKAEQLAKDYPEKYLE-PTEENLKFFRKEGIKFELDKIKADL 242

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               +  D++ SE      D   +   +  L  +GY YE                    L
Sbjct: 243 DNYRVHFDVWSSEQTI--RDSGDVDRALKVLDEKGYTYES----------------EGAL 284

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
            F++T +GDD DR L K+DGSYTY   D+AY   KY+RG+D ++  +G+DH GY+ RL+A
Sbjct: 285 WFKTTELGDDKDRVLRKTDGSYTYLVPDIAYHNDKYKRGYDLLVDFLGADHHGYIPRLKA 344

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              A+     ++NV + ++VRL  DG  +KMSKR G+  T+  + D VG D+ R+  + R
Sbjct: 345 SMQALGNDPDKLNVDIIQMVRLVSDGKEVKMSKRLGNATTINELCDSVGVDAARYFFVQR 404

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDFD    K QS +NPV+Y QYA+AR  SI +QAKDI     F          E 
Sbjct: 405 ALDSHLDFDIELAKRQSNDNPVYYAQYAHARMCSIQKQAKDIELADSF----------ED 454

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             D  E++L+  L E+ +VI  +   ++ +K+  Y+  LAS FH  ++        + + 
Sbjct: 455 LTDEKEIELMKTLQEFNKVIIESAKTRQVHKVCHYIQTLASKFHSFYNAC------KVID 508

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +N KL+  RL LV A   ++ + L  +GVE+   M
Sbjct: 509 RDNMKLSSQRLALVKATQIVLANALETVGVEAVESM 544


>gi|33603912|ref|NP_891472.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932133|sp|Q7WDQ0|SYR_BORBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33568888|emb|CAE35302.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 561

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 184/590 (31%), Positives = 302/590 (51%), Gaps = 50/590 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +L + ++    +   E +   ++ +ERP+  AHG ++TN AM L++P   +P  +A+ IV
Sbjct: 8   QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 65

Query: 70  ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   P     +    IAG GFIN  L+P+  + ++ ++      YGR     G KV +
Sbjct: 66  DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A +GD +  L   SG++VTRE+Y NDAG QI+ LA+SV  R 
Sbjct: 125 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239
            + +  +  D P   Y G Y+  + ++ A +          +    +   L  ++ ++V 
Sbjct: 184 GRGIAPDAPDYPADGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 243

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +    DL+A  +  D +  E   +      +++ +D L  +G+ YE           
Sbjct: 244 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 290

Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF + + + G
Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 345

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G V R+ A    +     K     +L ++V++ R G  +K+SKRAG ++T+R ++D
Sbjct: 346 SDHHGTVARVRAGLQGLEAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLID 405

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  ++   +     ++
Sbjct: 406 WVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI 465

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                             SE  L+  LAE+P+V+  A     P+ +AF+L D AS FH  
Sbjct: 466 -------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAW 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V  +   L + RL+L      ++ +GL ++GV +P+ M
Sbjct: 519 YNAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561


>gi|291302994|ref|YP_003514272.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572214|gb|ADD45179.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 550

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 183/581 (31%), Positives = 290/581 (49%), Gaps = 38/581 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            + ++ +  +       ++  +L +   +ERPR   HG  S+N ++ +++  G  P  +A
Sbjct: 6   LAEKVLSAARAAFDAAGLDTGVLPQTATVERPRVAEHGDYSSNISLQVAKKAGKPPRELA 65

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I A ++    + +V IAG GF+N+ L  +    +   I+ +G  YG N    G K+N+
Sbjct: 66  EAIAANLRAVEGIAAVDIAGPGFLNIKLDAAATGAVAGKIIEAGDTYGHNDSLNGQKLNL 125

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+G  R A VGD L  +++ SG EVT EYY+NDAG Q++    S+    
Sbjct: 126 EFVSANPTGPIHIGSVRWAAVGDALGRVISASGAEVTTEYYVNDAGVQMDLFGASLLAAA 185

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +         +P   Y G Y+K + K++       L +    +     +   +  M+  I
Sbjct: 186 K------GEPVPADGYQGDYVKDIAKQIVADRPELLTSDDPRQG---FRQAGLDLMLAEI 236

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L    +  D++ SE   H G    I   +  L   G  +E                 
Sbjct: 237 KRSLADFGVHFDVYFSEKQLHDG--GDIDAAVAKLTELGATFES---------------- 278

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L  R+T  GDD DR L K DG++TYFAAD AY++ K +RGFD ++Y++G+DH GY+ 
Sbjct: 279 EGALWLRTTDHGDDKDRVLRKEDGTWTYFAADAAYYRDKRQRGFDPLVYMLGADHHGYIG 338

Query: 366 RLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           R++A++A   +   A I +L+ +LV L +DG P++MSKRAG   TL   V  +GSD+ R+
Sbjct: 339 RMKALSACFGDDPNATIEILIGQLVNLKKDGQPLRMSKRAGTITTLDEFVAALGSDAGRY 398

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +    +   +D D       S +NPV+YVQYA+AR  S+ R A ++         P+  
Sbjct: 399 ALARYSSDSTIDLDLDLWTSASNDNPVYYVQYAHARIASLLRNAGELGLSRGESYDPK-- 456

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                     E  L+  LA +P+V+  A   +EP+++A Y  DLA  +H  +   R  PR
Sbjct: 457 ----LLDHPRESDLLKQLAGFPKVVATAAELREPHRVARYAEDLAGAYHRFYDACRVLPR 512

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                         RL LV A   ++ + L ++GV +P  M
Sbjct: 513 G---DEEFTDTGAARLWLVEATRVVLANALRLLGVSAPERM 550


>gi|114321921|ref|YP_743604.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228315|gb|ABI58114.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 611

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 305/615 (49%), Gaps = 61/615 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    +  L+  +  +  +  +       I +ER RD AHG  + N AM+L+R     P 
Sbjct: 26  MKKHIAHCLQQAVSRLCEQGFLPPDTEVDIQVERARDRAHGDYAANTAMMLARAARRKPR 85

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ +V  +     +D   IAG GFIN  L+P      +   +    +YGR+ +G G +
Sbjct: 86  EIAQALVGALPGSEYIDRAEIAGPGFINFILTPQAAWAPVRQALSQAGDYGRSDLGAGRR 145

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G  LA L+A +GY+V REYY+NDAG Q++ LA SV+
Sbjct: 146 VMVEFVSANPTGPLHVGHGRGAAFGAALADLLAAAGYDVYREYYVNDAGRQMDILAASVW 205

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------- 226
            RY +A        P+  Y G Y++ +   LA++    L +  +                
Sbjct: 206 LRYLEAC-GEPVRFPDNGYRGDYVREIATGLAEQVGDALRHPADRVMADLPPDAAQGGDR 264

Query: 227 ----------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                           E     V +  +  ++  IRDDL+   + +  + SE      + 
Sbjct: 265 EQHIDALVRRARALLGEAGYRQVFEQGLNGILADIRDDLEGFGVTYQNWYSERSL--TES 322

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   +  L   G+ Y+                    L FRS+  GDD DR L + +G 
Sbjct: 323 GQVERALARLTEAGHTYQ----------------QDGALWFRSSAFGDDKDRVLRRENGQ 366

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TYFA+D+AY   K +RGFD ++ V G+DH GYV R+ A  AA  E + +++V L +   
Sbjct: 367 TTYFASDVAYHLDKLQRGFDQLVDVWGADHHGYVPRVRAALAAFGEDEQRLSVRLVQFAI 426

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    ++MS R+G+F+TLR +  EVG D+ RF  + RK  + +DFD    K +S +NP
Sbjct: 427 LYRGQERLQMSTRSGEFVTLRQLRAEVGDDAARFFYVMRKPEQHMDFDLELAKSESSDNP 486

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+Y+QYA+AR  S+FRQ  +     D     R +   +   +  E  L+  L  YP VIE
Sbjct: 487 VYYLQYAHARICSVFRQLDEKGLVWDR---ARGLDALDRLGEDHEQALVTELGRYPEVIE 543

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  A EP+++A YL DLA+  H +++  +           +  L   RL LV A   ++
Sbjct: 544 SAAQAHEPHQVAAYLRDLANALHTYYNAHQF-------IVEDAALRDARLCLVAATRQVL 596

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P  M
Sbjct: 597 RNGLELLGVRAPERM 611


>gi|289671095|ref|ZP_06492170.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 566

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 193/595 (32%), Positives = 309/595 (51%), Gaps = 41/595 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + A   + +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P
Sbjct: 1   MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60

Query: 62  L----TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
                 +A+ ++A +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L 
Sbjct: 61  RSNPRVLAQALLAALPASDDVAKVDIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLA 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G  V +E+VSANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  L
Sbjct: 121 GNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENL 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPI 232
           ALSV  R  Q L  + +  PE  Y G Y+  V          D     +    +   L  
Sbjct: 181 ALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLES 239

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL A  +  DI+  E   ++     + + +  L   G+ YE    
Sbjct: 240 IRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQQLIASGHTYE---- 293

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                       +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  
Sbjct: 294 ------------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERA 341

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I  +G+DH G + R+ A   A+     +     +L ++V + R G  +K+SKRAG ++TL
Sbjct: 342 ITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTL 401

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +++E  +D+VR+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++
Sbjct: 402 RDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQE 461

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                D       +       D   L +++ L+ YP V+E A  A EPY++A YL +LA 
Sbjct: 462 KGYKYDQ---THGLAELAHLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAH 518

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FH  + + +       V  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 519 AFHTWYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 566


>gi|291530393|emb|CBK95978.1| arginyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 584

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 188/604 (31%), Positives = 306/604 (50%), Gaps = 54/604 (8%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                + N L  +  + K+E   L    +ERP D +HG  S NAAM  ++ L  +P  I 
Sbjct: 11  QVKETVMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIG 70

Query: 66  ELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           ++I     +D    + + +AG GF+N ++SP +  + +  ++ SG +YG+  +GKG +V 
Sbjct: 71  QMIADAAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVL 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD+L+S++ F+GYEV RE+Y+NDAG QI     S+  R
Sbjct: 131 VEFVSANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIR 190

Query: 185 YQQALYNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELL 222
           Y Q    N SD                      +PE  Y GV +             + +
Sbjct: 191 YMQIADGNKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFV 250

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           N  EE     + +Y++   +  +  DL    I +D +  E   H+     ++ I+D L  
Sbjct: 251 NADEESRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHK--SGAVKQIVDMLTE 308

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  YE                    + F+++  GDD DR L++++G  TYF  D+AY  
Sbjct: 309 KGQTYE----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHY 352

Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            K   RGFD  I ++G+DH GY+ R++A   A+    +++++++ ++V L R+G  +K+S
Sbjct: 353 NKLVTRGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLS 412

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           KR+G  ITL  ++DEV  D+ RF    R  +  L+FD     E+S  NPVFYVQYA+AR 
Sbjct: 413 KRSGKAITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARI 472

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R+ ++         +    + + +    +EL LI H+A  P  I  A     P K+
Sbjct: 473 CSILRRMEEEGTG-----YSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL DLA +FH  + + +       ++     +   RL L  A  ++  + L+++ V++
Sbjct: 528 TKYLCDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDA 580

Query: 582 PNEM 585
           P +M
Sbjct: 581 PEKM 584


>gi|312135721|ref|YP_004003059.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775772|gb|ADQ05259.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 561

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 195/592 (32%), Positives = 320/592 (54%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L           ++N +K    K   E   +  I+IE+P++ +HG  +TN AM L+R 
Sbjct: 1   MNLVKLAKQQIQDVVQNAIKNCIDKGIFELDSIPEIMIEKPKEKSHGDFATNIAMELTRK 60

Query: 57  LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
              +P  IA+ I+  I +     + V +AG GFIN +    +L K++  I+  G  YG+ 
Sbjct: 61  FKKNPREIAQNILDCIDLSGTFIEKVEVAGPGFINFFFRNDWLYKVVEVILSEGNNYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            +G G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NVGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   + +LPE  Y G  +    +E  ++Y  +L N   ++    + +
Sbjct: 181 KFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERVREYLNEYGDDLENLSSDERRKKLVE 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ LK   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNISLMKEHLKKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMV-GDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ + G+  D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFAASKIDGNLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD      N++ QE EF+  +  L +        IE A    +  ++  YL DL+++FH
Sbjct: 462 VLDRGRIKLNLLQQEEEFELLKKLLELP-----EEIEIAARNFDVSRVTKYLLDLSAIFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  +       V+  N  L   RL LV  V  +I + L+++GVE+P  M
Sbjct: 517 SFYNACK-------VKNENEDLMFTRLALVECVRIVIKNMLDLLGVEAPERM 561


>gi|88799634|ref|ZP_01115210.1| arginyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777719|gb|EAR08918.1| arginyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 561

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 187/590 (31%), Positives = 304/590 (51%), Gaps = 36/590 (6%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    +S L+    ++  +  +      R++++  RD AHG L++N A++L++P   +P 
Sbjct: 1   MKQQIASLLEAATDQLKSEGFIPADHPIRVMVDNTRDKAHGDLASNLALMLAKPCQSNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE ++A +  +  VD V IAG GFIN YL+     +I++ I+    ++G N  G+G K
Sbjct: 61  AVAEKLIAALPDNQIVDKVEIAGPGFINFYLAGESSAEIVADILNRRAQFGTNDSGQGRK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A +GD+L  L+  +G++ TRE+Y NDAGAQIN LA+SV 
Sbjct: 121 VQVEFVSANPTGPLHVGHGRNAALGDSLCRLLEANGWQPTREFYYNDAGAQINNLAISVQ 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYS 237
            R  + L   D   P   Y G Y+  + +             E+    +   L  + +++
Sbjct: 181 SRI-KGLTPEDDAWPADGYRGEYIIELARSYMKGDQVIADDREVTAKADADDLDAILEFA 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DLKA +++ D++  E   +      +   +  L   G+ YE         
Sbjct: 240 VAYLRHEQDLDLKAFDVRFDVYSLESSLY--SDGLVEATVKQLVDNGFTYE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D   +  ++T  GDD DR + K DG YTYF  D+AY K K+ERGFD +I V G
Sbjct: 289 -------DDGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHKAKFERGFDRVINVQG 341

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +DH   V R+ A   A+     +   +  L +++ + R G  +K+SKRAG ++TLR +++
Sbjct: 342 ADHHSTVTRVRAGLQALKEGIPEGFPDYALYQMIMVMRGGEEVKLSKRAGSYVTLRDLIE 401

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           E G D+ R+ ++ R+    + FD      ++ +NPV+Y+QYA+AR   +  +  +     
Sbjct: 402 EAGRDATRYFLVSRRADAQITFDIDLATSKNNDNPVYYIQYAHARVHGVLNRLAEQNLSY 461

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D       +         +E +L+  L  YP V+  A  A EP  +A YL DLA +FH +
Sbjct: 462 DE---AAGLAALGKLDLDAERELMTQLRRYPDVVTAAADALEPAMIANYLKDLAGLFHSY 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  +       +          RL L  AVA ++ +GLN++GV +P  M
Sbjct: 519 YNSNK-------MLVEQDDQRNARLVLSKAVAQVLANGLNLLGVSAPESM 561


>gi|308233577|ref|ZP_07664314.1| arginyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943970|ref|ZP_08241435.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491939|gb|EGF23713.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 615

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 194/629 (30%), Positives = 302/629 (48%), Gaps = 68/629 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  +   LK+      +    ++   IERP D  HG  S+  A+  +R   + P  IA+
Sbjct: 5   INDLVLCALKDAQASSDLPDFKIEDACIERPADADHGDWSSTVALRTARLAHMAPAKIAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +IV  +  + +V+ V IAG GFIN YL  +    +++ +   G  +G    G G K+N E
Sbjct: 65  IIVDHLPENKEVEKVEIAGPGFINFYLKAAASNDVINDVRAQGSRWGSCDDGHGFKINYE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY- 185
           F+SANPTGP+HVGH R A +GD++ +++ F GY+V REYYIND G+Q++    SV  RY 
Sbjct: 125 FISANPTGPLHVGHGRWAALGDSICNVLDFCGYDVFREYYINDHGSQMDVFGGSVAMRYV 184

Query: 186 ------------------------QQALYNNDSDLPEGY--------------YPGVYLK 207
                                   ++ + + D   PE +              Y G Y+ 
Sbjct: 185 QLCQIMQEKSCDSNKAYELLLQDREEYVLDEDDSHPEKHPFMDAFNEHLGGNSYGGDYII 244

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + KE  D          EEK     ++ + QAM+  I+     +    D++ SE   + 
Sbjct: 245 EIAKEFYDADGDAWYKVDEEKRCDAFRERAYQAMLSRIKKTCHNVRCDFDLWFSERSLYD 304

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +    S +      L   GY+Y+                D   L F+ST  GDD DR L
Sbjct: 305 KNEQGVSLVDKAFARLDEMGYLYK---------------TDDGALWFKSTAFGDDKDRVL 349

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KS+G YTYFA+D+AY   K++RG    I + GSDH GY+ R+  V  A+   K Q  V 
Sbjct: 350 IKSNGDYTYFASDVAYHWNKFDRGAQLSIDLWGSDHHGYIARVTNVCDALGF-KGQFKVD 408

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L R+G P++MSKR G  +    ++ EVG D+ R+ ++ + +++ +DFD   VKE
Sbjct: 409 LGQFVNLLRNGEPVRMSKRRGTMVPFDELIAEVGVDATRYTLVSKSSNQTIDFDIEAVKE 468

Query: 445 QSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEF----DTSEL 496
           +S  NPVFYVQYA+AR  SI R A    ++    L  D   +  I    +        E 
Sbjct: 469 KSNANPVFYVQYAHARICSILRHAAGVSEEEAKSLGMDAVAQKAIGNACDLSLLVHPMEA 528

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L   L+E+P +I      + P+++  +  +LA  FHG +++ +           + +L+
Sbjct: 529 ALTRKLSEFPELISGCARDRAPFRITHFCEELAGAFHGFYANCQVLSSEGRQI--DPELS 586

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL    AV   +   L +IGV +P+ M
Sbjct: 587 RARLAACDAVRINLEVALKLIGVSAPDVM 615


>gi|300313639|ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300076424|gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 577

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 198/609 (32%), Positives = 305/609 (50%), Gaps = 58/609 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A    R+ +        +  E  +   I +ERPRD +HG ++ N AM L++PL  +P 
Sbjct: 1   MLAQQKQRISDLFSSALQPLLAESGLTPTITLERPRDASHGDVACNIAMQLAKPLKKNPR 60

Query: 63  TIAELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +A+ IVA +  DP  +    SV IAG GFINL ++ +  + ++  I   G  YGR   G
Sbjct: 61  ELAQAIVAAVMADPAREDLVESVEIAGPGFINLRVAAAAKQAVVKVIHEQGEAYGRGSAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTGP+HVGH R   +GD L+SL+   GY+V RE+Y NDAG QI TLA
Sbjct: 121 AGKKVLVEFVSANPTGPLHVGHGRQGALGDALSSLLEAQGYDVLREFYYNDAGVQIATLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPI 232
            SV  R +      D++ PE  Y G Y+  + ++  DK          +    E   +  
Sbjct: 181 TSVQARAR-GFKPGDAEWPESAYNGDYIADIARDFLDKKTVSASDGEPVTGSGEVDDIES 239

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L   G  YE    
Sbjct: 240 IRRFAVAYLRHEQDLDLQAFGVKFDNYYLESSLYA--DGKVAAAVDALIAAGKTYE---- 293

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + K+DG+YTYF  D+AY   K++RG+  +
Sbjct: 294 ------------QDGALWLRTTDYGDDKDRVMKKTDGTYTYFVPDVAYHINKWQRGYGKV 341

Query: 353 IYVMGSDHSGYVKRLEAV--AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A   AA V   +   + +L ++V + R+G  +K+SKRAG ++TL
Sbjct: 342 INIQGSDHHGTIARVRAGLQAAGVGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401

Query: 411 RHVVDE--------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           R +++                G D+VRF ++ RK      FD      QS ENPV+YVQY
Sbjct: 402 RDLIEWSAGEPVEGQERDLTRGRDAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQY 461

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  ++  ++      +D +    +           E  L+  LAEYP ++ +A    
Sbjct: 462 AHARICTVLGKSG-----VDEEALKSSA-DLSLLTAPREATLLAKLAEYPDMLAHALQEL 515

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+++AFYL DLA   H +++  R       V  ++      RL L+ A   ++ +GL +
Sbjct: 516 GPHQVAFYLRDLAGELHSYYNAER-------VLVDDVPTRSARLALLSATRQVLRNGLAL 568

Query: 577 IGVESPNEM 585
           +GV +P  M
Sbjct: 569 LGVSAPARM 577


>gi|167749948|ref|ZP_02422075.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702]
 gi|167657115|gb|EDS01245.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702]
          Length = 584

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 188/604 (31%), Positives = 306/604 (50%), Gaps = 54/604 (8%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                + N L  +  + K+E   L    +ERP D +HG  S NAAM  ++ L  +P  I 
Sbjct: 11  QVKETIMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIG 70

Query: 66  ELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           ++I     +D    + + +AG GF+N ++SP +  + +  ++ SG +YG+  +GKG +V 
Sbjct: 71  QMIADAAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVL 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD+L+S++ F+GYEV RE+Y+NDAG QI     S+  R
Sbjct: 131 VEFVSANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIR 190

Query: 185 YQQALYNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELL 222
           Y Q    N SD                      +PE  Y GV +             + +
Sbjct: 191 YMQIADGNKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFV 250

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           N  EE     + +Y++   +  +  DL    I +D +  E   H+     ++ I+D L  
Sbjct: 251 NADEESRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHK--SGAVKQIVDMLTD 308

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  YE                    + F+++  GDD DR L++++G  TYF  D+AY  
Sbjct: 309 KGQTYE----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHY 352

Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            K   RGFD  I ++G+DH GY+ R++A   A+    +++++++ ++V L R+G  +K+S
Sbjct: 353 NKLVTRGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLS 412

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           KR+G  ITL  ++DEV  D+ RF    R  +  L+FD     E+S  NPVFYVQYA+AR 
Sbjct: 413 KRSGKAITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARI 472

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R+ ++         +    + + +    +EL LI H+A  P  I  A     P K+
Sbjct: 473 CSILRRMEEEGTG-----YSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL DLA +FH  + + +       ++     +   RL L  A  ++  + L+++ V++
Sbjct: 528 TKYLCDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDA 580

Query: 582 PNEM 585
           P +M
Sbjct: 581 PEKM 584


>gi|291557256|emb|CBL34373.1| arginyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 584

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 187/604 (30%), Positives = 306/604 (50%), Gaps = 54/604 (8%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                + N L  +  + K+E   L    +ERP D +HG  S NAAM  ++ L  +P  I 
Sbjct: 11  QVKETVMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIG 70

Query: 66  ELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           ++I     +D    + + +AG GF+N ++SP +  + +  ++ SG +YG+  +GKG +V 
Sbjct: 71  QMIADAAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVL 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD+L+S++ F+GYEV RE+Y+NDAG QI     S+  R
Sbjct: 131 VEFVSANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIR 190

Query: 185 YQQALYNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELL 222
           Y Q    N +D                      +PE  Y GV +             + +
Sbjct: 191 YMQIADGNKADVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFV 250

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           N  EE     + +Y++   +  +  DL    I +D +  E   H+     ++ I+D L  
Sbjct: 251 NADEESRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHK--SGAVKQIVDMLTE 308

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  YE                    + F+++  GDD DR L++++G  TYF  D+AY  
Sbjct: 309 KGQTYE----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHY 352

Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            K   RGFD  I ++G+DH GY+ R++A   A+    +++++++ ++V L R+G  +K+S
Sbjct: 353 NKLVTRGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLS 412

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           KR+G  ITL  ++DEV  D+ RF    R  +  L+FD     E+S  NPVFYVQYA+AR 
Sbjct: 413 KRSGKAITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARI 472

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R+ ++         +    + + +    +EL LI H+A  P  I  A     P K+
Sbjct: 473 CSILRRMEEEGTG-----YSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL DLA +FH  + + +       ++     +   RL L  A  ++  + L+++ V++
Sbjct: 528 TKYLCDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDA 580

Query: 582 PNEM 585
           P +M
Sbjct: 581 PEKM 584


>gi|167772363|ref|ZP_02444416.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM
           17241]
 gi|167665466|gb|EDS09596.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM
           17241]
          Length = 564

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 193/584 (33%), Positives = 307/584 (52%), Gaps = 34/584 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D +  L   L+       +     L   V+E P D +HG  ++N AM  +RP    P  I
Sbjct: 11  DIAVLLDGALERAVESGALPAASELPDFVVEIPADTSHGDFASNIAMACARPFKCAPRKI 70

Query: 65  AELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE I A + +     + V IAG GFIN +LSP +   ++ S++ +G +YGR   G+G KV
Sbjct: 71  AEAICAALDLTGTVFERVEIAGPGFINFFLSPRWFADVVKSVLSAGADYGRTDYGRGEKV 130

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGPMH+G+ R   +GD LA+ + +SG+ VTRE+Y+NDAG QI     S+  
Sbjct: 131 QVEFVSANPTGPMHMGNARGGALGDCLAAALDWSGHNVTREFYVNDAGNQIEKFGCSLEA 190

Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           RY Q     D+   PE  Y G  ++   ++ AD++    +          + D+++   +
Sbjct: 191 RYLQIFKGEDAVAFPEDGYHGDDIRERAQQFADQFGDRFVESDSAARRQALVDFALPRNI 250

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + ++ DL+   I +D++  E + H G    I + I  L  +G  YE              
Sbjct: 251 EKLKADLERYRIHYDVWFRESELHHG---AIDEAIRVLTARGMTYE-------------- 293

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
                 L +R+T  G + D  L++++G  TYFAAD+AY   K+  RGF+ +I V G+DH 
Sbjct: 294 --QDGALWYRATENGGEKDEVLVRANGFPTYFAADIAYHYNKFAVRGFERVINVWGADHH 351

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G+V RL+    A+     +++++L + VRL +DG P+KMSKR G  I+L  +++EV  D+
Sbjct: 352 GHVARLKGAMDAIGLNGDRLDIVLMQFVRLMQDGKPVKMSKRTGKAISLTDLIEEVPVDA 411

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF+   R+ + ++DFD     EQS +NPV+YVQYA+AR  S+ ++ +D         + 
Sbjct: 412 ARFLFNMREPNSMVDFDLDLAVEQSMQNPVYYVQYAHARICSLLKKLEDEGVAPRACTYD 471

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  +     E++LI  LA +P+ I ++    +P +L  Y  DLA+VFH H++  R 
Sbjct: 472 E----LCALRAPEEIELIRTLARFPQEIIDSVRGYDPARLTKYATDLATVFHKHYTVHR- 526

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V+     L   RL L  A  ++I + L ++ +  P  M
Sbjct: 527 ------VRGEAEPLMQARLNLYLATRTVIANVLGMLKITVPESM 564


>gi|134093383|ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166232794|sp|A4G1E2|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|133737286|emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas
           arsenicoxydans]
          Length = 577

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 201/611 (32%), Positives = 310/611 (50%), Gaps = 62/611 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A    R+    +     +    ++   + +ERPRD +HG ++ N AM +++PL  +P 
Sbjct: 1   MLAAQKQRITELFQAAVAPLVAGTELNPTVTLERPRDPSHGDVACNLAMQIAKPLKKNPR 60

Query: 63  TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +A+++VA +  +P      +S  IAG GFINL L+P+  + ++ +++  G +YG++ +G
Sbjct: 61  EVAQVLVAALLDNPANRDLIESAEIAGPGFINLRLTPASRQSVVKTVLQQGAQYGKSNLG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV IEFVSANPTGP+HVGH R   +GD ++SL    GY VTRE+Y NDAG QI TLA
Sbjct: 121 AGKKVIIEFVSANPTGPLHVGHGRQGALGDAMSSLFDAQGYAVTREFYYNDAGVQIATLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPI 232
            SV  R +  L       PE  Y G Y++ +  +   K          +    +   +  
Sbjct: 181 TSVQARAR-GLKPGAEGWPESAYNGDYIQDIANDFLAKKTVSASDGLPVTASGDIDDIES 239

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +  +   +   +D L +    YE    
Sbjct: 240 IRAFAVAYLRREQDLDLQAFGVKFDNYYLESSLY--NDGKVAATVDALIKADKTYEL--- 294

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T   DD DR + KSDG+YTYF  D+AY   K++RGF   
Sbjct: 295 -------------DGALWLRTTDYRDDKDRVMKKSDGTYTYFVPDVAYHTVKWQRGFTQA 341

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I V GSDH G + R+ A   A+     +   + +L ++V + R+G  +K+SKRAG ++TL
Sbjct: 342 INVQGSDHHGTIARVRAGLQALDIGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401

Query: 411 RHVVDE--------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           R +++                G D+VRF ++ RK      FD      QS ENPV+YVQY
Sbjct: 402 RDLIEWSNGETVEGQERDLTRGRDAVRFFLISRKADTEFVFDVDVALSQSDENPVYYVQY 461

Query: 457 AYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           A+AR  S+  Q    D    LD DL P             E  L+  LAEYP  ++ A  
Sbjct: 462 AHARICSVLAQWTDGDEAALLDVDLSPLTA--------PREAALLAKLAEYPEALQRALE 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+++AFYL DLA+  H +++  R       V  ++  L M RL L+HA   ++ +GL
Sbjct: 514 ELGPHQVAFYLRDLAAELHSYYNAER-------VLVDDVALKMARLTLMHATRQVLRNGL 566

Query: 575 NIIGVESPNEM 585
            +IGV +P  M
Sbjct: 567 ALIGVSAPARM 577


>gi|317404348|gb|EFV84773.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 566

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 183/595 (30%), Positives = 296/595 (49%), Gaps = 49/595 (8%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
               S ++  + +     + +    + +++ERP+  AHG ++TN AM L++P   +P  +
Sbjct: 7   KQLISLIQAAVAQSLPDAQADTAQAN-VLLERPKVAAHGDVATNVAMQLAKPAKRNPREL 65

Query: 65  AELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           A+ IV  +         V+S  IAG GFINL ++ +  + +++++   G  +GR     G
Sbjct: 66  AQAIVEALLALPGARDLVESAEIAGPGFINLRVTAAARQAVITAVAEQGEAFGR-AARSG 124

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPTGP+HVGH R A +GD L  L    G++VTRE+Y NDAG QI  LA+S
Sbjct: 125 EKILVEFVSANPTGPLHVGHARQAALGDALCRLYDAIGWDVTREFYYNDAGNQIENLAIS 184

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVK 234
           V  R +  +  +  D P   Y G Y+  + ++              +        L  ++
Sbjct: 185 VQARAR-GVGTDSPDWPADGYKGDYIVDIARDFQAGKTIQASDGEPVTATGNIDSLEDIR 243

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            ++V  + +    DL+A  ++ D +  E   +      +   +  L   G+ YE      
Sbjct: 244 AFAVAYLRREQDLDLQAFGLKFDNYYLESSLYT--SGRVEATVKALIAGGHTYE------ 295

Query: 295 KSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                     +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF   
Sbjct: 296 ----------EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRA 345

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + + GSDH G V R+ A   A+     K   + +L ++V++ R G  +K+SKRAG ++T+
Sbjct: 346 VNIQGSDHHGTVARVRAGLQALEEGIPKDYPSYVLHKMVKVMRGGQEVKISKRAGSYVTM 405

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R ++D VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  S+   A  
Sbjct: 406 RDLIDWVGRDAVRYFLIQRRADTEFVFDVDLALSKSDENPVYYIQYAHARICSVINNAG- 464

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                                  SE  L+  LAE+P V+  A     P+ +AF+L D A+
Sbjct: 465 ------MPAAEVAAADASLLTAPSEFALMQRLAEFPHVVALAAQELAPHHIAFWLRDCAA 518

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            FHG ++  R       V  ++  L + RL+L      ++ +GL ++GV +P  M
Sbjct: 519 DFHGWYNAER-------VLVDDPALKLARLRLAATTRQVLANGLALLGVSAPERM 566


>gi|308066957|ref|YP_003868562.1| arginyl-tRNA synthetase [Paenibacillus polymyxa E681]
 gi|305856236|gb|ADM68024.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 506

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 185/536 (34%), Positives = 283/536 (52%), Gaps = 31/536 (5%)

Query: 51  MILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           M L+R    +P  IAE ++A +      ++S  IAG GFIN  L+ SYL  ++  +   G
Sbjct: 1   MQLTRIAKKNPRQIAEDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQG 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +YGR   G G KV IEFVSANPTG +H+GH R A VGD L +++ F+GY+VTREYYIND
Sbjct: 61  ADYGRIQEGAGKKVQIEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYKVTREYYIND 120

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG QI  ++ S+  RY Q L    +++PE  Y G  +    KEL  +    LL+      
Sbjct: 121 AGNQIYNMSRSIEARYLQEL-GQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDR 179

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
               +DY ++  +  I+ DL+   +  D + SE   +  +   +   ++ L  +  +YE 
Sbjct: 180 AAYFRDYGLEKELNKIKRDLELFRVPFDSWFSETSLY--ENGEVLKALNELRDREEIYE- 236

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                                  +T  GDD DR L+K+DG+YTY   D+AY + KY RG+
Sbjct: 237 ---------------KDGATWLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGY 281

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D +I + G+DH GY+ R++A   A+     ++ VL+ ++V L+++G  +KMSKR G  +T
Sbjct: 282 DTIINIWGADHHGYIPRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVT 341

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +++EVG D++R+    R     LDFD       S ENPVFYVQYA+AR  S++RQA+
Sbjct: 342 MEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAE 401

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +        + P   +         E  L+  + E P  +  A     P+++  Y+Y+LA
Sbjct: 402 EQG----IAVLPLAEVDLSKLTAEHEYDLLRKIGELPEEVSVAAANFAPHRMIRYVYELA 457

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S+FH ++   R       V   +   T  RL L  AV + I + L ++GV +P  M
Sbjct: 458 SLFHSYYKAER-------VITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM 506


>gi|154509454|ref|ZP_02045096.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC
           17982]
 gi|293189483|ref|ZP_06608203.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|153799088|gb|EDN81508.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821573|gb|EFF80512.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 559

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 188/588 (31%), Positives = 305/588 (51%), Gaps = 41/588 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + ++ ++  L +     ++      + D + +ERPR   HG  +TN AM L +  G+ P 
Sbjct: 5   ELATLIRATLLDAAAAGRISIDPSLVPDPVTVERPRVREHGDWATNVAMQLGKKAGMAPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A+++   +     +DSV +AG GFIN+ L      ++  +IV +G  YGRN    G  
Sbjct: 65  EFAQILADDLAAADGIDSVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLSGRS 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA LMA SG  VTREYY ND G+QI+  + S++
Sbjct: 125 INLEYVSANPTGPVHLGGARWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDRFSHSLY 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238
            R          ++PE  Y G Y+  +  ++     +    + +  PEE+ + + +   V
Sbjct: 185 ARAM------GREVPEDGYGGQYIADIADQVRADARAAGEPDPITLPEEEAIEVFRARGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I++ L +     D+F  E+  H      +   I+ L  +G +++          
Sbjct: 239 ELMFAEIKERLHSFRADFDVFFHEESLHT--SGAVAAAIERLRERGEIFD---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 +   +  R+T  GDD DR L+KSDG   YFA D+AY+  K ERG D  IY++G+
Sbjct: 287 ------EDGAVWLRTTTYGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADVAIYLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  +K  + + +L+ +LV L +DG P++MSKRAG  +TL  +VD V
Sbjct: 341 DHHGYIARMMAMCAAFGDKPGENLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       +D D   + + S +NPV+YVQYA+ R  ++ R A +     D 
Sbjct: 401 GVDAARYALVRVSMDTQVDIDLDLLSQHSNDNPVYYVQYAHVRACNVARNAAEHGVTRDA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +  +  E   + L       ++P  +  AT  +EP+++  YL  LA+ +H  + 
Sbjct: 461 GFDPAALDSEADEALLAALA------QFPAQVAQATELREPHRITRYLESLAATYHAWYG 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  PR            + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 515 QCRVTPRG---DDPVEPGHIARLWLNDAVTQVLRTGLGLLGVSAPERM 559


>gi|238028767|ref|YP_002912998.1| arginyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877961|gb|ACR30294.1| Arginyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 594

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 196/615 (31%), Positives = 311/615 (50%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKI---LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++   +K E      +  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLADSVKQVVQALKGEADAAFAVPAITLERPKAAAHGDVACNVALQLAKPLGTNPRQ 68

Query: 64  IAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P      ++  IAG GFINL L+    + ++ ++      +GR+    
Sbjct: 69  LAEQIVAAVTAQPAAAGLVEAAEIAGPGFINLRLTAGAKQAVIGAVFAERDAFGRSDRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LAL
Sbjct: 129 GRRVLLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + +E       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAAWPEAAYNGEYIADIAREYLAGATVAASDGQPVTGKGDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +  +   +   ++ L   G  YE     
Sbjct: 248 RRFAVAYLRREQDTDLKAFGVRFDQYYLESSLY--EEGRVERTVNALVAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGAAPGSEASPDQLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K      +  L   ++ P +S    + + L+  LAEYP ++ 
Sbjct: 470 VYYVQYAHARICSVMNEWKSRHGGDEARLAGADLSPLDSR---AAMALLQKLAEYPDMLT 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LA  FH  ++  R       V  ++      R+ L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELAGEFHSFYNAER-------VLVDDEAQRTARIALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV SP++M
Sbjct: 580 ANGLAVLGVSSPSKM 594


>gi|161523565|ref|YP_001578577.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351665|ref|YP_001947293.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221211064|ref|ZP_03584043.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|238687040|sp|A9AE58|SYR_BURM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|160340994|gb|ABX14080.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335687|dbj|BAG44757.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221168425|gb|EEE00893.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 598

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 200/616 (32%), Positives = 307/616 (49%), Gaps = 62/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V+S  IAG GFINL LS +  + ++ +++  G  +G +   
Sbjct: 72  QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLAQGRAFGTSDRE 131

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGVQIGNLA 191

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    +   L  
Sbjct: 192 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  +   + +L                  L+  LAEYP ++
Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY---NGELAQLPQADLSQLTSPQAASLMQKLAEYPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 583 LENGLAMLGVSAPEKM 598


>gi|332531547|ref|ZP_08407444.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332038910|gb|EGI75339.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 561

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 190/590 (32%), Positives = 301/590 (51%), Gaps = 43/590 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L  +  ++        R   E P+   HG L+T AAM +++PL   P  +AE
Sbjct: 4   VKNELLQTLSIVLEQLLPGAG--ARAAFESPKLAEHGDLATTAAMQIAKPLKQPPRQVAE 61

Query: 67  LIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +   +   P     VD+V IAG GFIN+ L P+  ++I+  ++ +G  YGR    KG +
Sbjct: 62  DLRRALLAMPAFSIWVDAVEIAGPGFINIRLKPAAKQEIVREVLGAGERYGRQTP-KGQR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EFVSANPTGP+HVGH R A +GD +++L A  G+EV RE+Y NDAG QI TLA+SV 
Sbjct: 121 MMVEFVSANPTGPLHVGHGRQAALGDAISNLYATQGWEVYREFYYNDAGVQIQTLAVSVQ 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYS 237
            R +  L   D+  PE  Y G Y+  +  +                  +   L  ++ ++
Sbjct: 181 ARAR-GLKPGDAGWPESAYNGDYIADIAADFMAGKTVQADDRSYTASGKVDDLDGMRLFA 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A N++ D +  E   +      +   ++ L   G  YE         
Sbjct: 240 VAYLRHEQDLDLQAFNLRFDNYYLESSLYT--SGRVDAAVEKLRAAGKTYE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  RST  GDD DR + K DG+YTYF  D+AY   K+ERGF  ++ + G
Sbjct: 289 -------QDGALWLRSTDYGDDKDRVMRKGDGTYTYFVPDVAYHISKWERGFQKVVNIQG 341

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +DH G + R+ A   A  V   +   + +L  +VR+ R G  +K+SKRAG ++TLR +++
Sbjct: 342 TDHHGTIARVRAGLQAAGVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIE 401

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
               D+VRF +L RK      FD     +++ +NPV+YVQYA+AR  S+    ++     
Sbjct: 402 WTSKDAVRFFLLSRKPDTEYTFDVDLAVQKNNDNPVYYVQYAHARICSVLAAWREKDGGD 461

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
              L   ++   ++   ++   L++ LA+YP ++  A     P+ +AFYL DLAS +H +
Sbjct: 462 PVTLRDADLTALDT---SAAHTLMLKLAQYPDMLTGAARDFAPHDVAFYLRDLASSYHSY 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   R       +  ++  +   RL LV A A ++ +GL ++GV +P +M
Sbjct: 519 YDAER-------ILVDDEAVKRARLALVAATAQVLRNGLAVLGVSAPEKM 561


>gi|326382074|ref|ZP_08203767.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199500|gb|EGD56681.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 550

 Score =  531 bits (1369), Expect = e-148,   Method: Composition-based stats.
 Identities = 185/582 (31%), Positives = 298/582 (51%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            + ++ L+   +++     ++  ++   +V+ERPR   HG  +TN A+ L +  G++P  
Sbjct: 4   TELAALLRAATQKVFQAHDLDTSLIPETVVVERPRSPEHGDYATNIALQLGKRAGVNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +      DP +DS  IAG GF+NL L+ +   + ++S++  G +YGR        V
Sbjct: 64  LATWLADEFASDPGIDSAEIAGPGFVNLRLAAAAQNQTVASVLDRGADYGRGDELSTLNV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY ND G QIN  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLAARGAQVTREYYFNDHGEQINRFANSLMA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +   +  K    +L+ P +      +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYAGEYIDDIAGTVVAKV-PGILDLPVDDAREAFRAEGVELMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     D   + + I  L   G +YE               
Sbjct: 237 HIKRTLHEFGTDFDVYTHENSMF--DRGLVDESIAELKANGNLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG+  Y A D+AY K K++RG +++IY++G+DH GY
Sbjct: 281 --DGAWWLRSTNYGDDKDRVVIKSDGNAAYIAGDIAYLKDKHDRGANHLIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+      + VL+ ++V L +DG P++MSKRAG  I L  +V+ VG D+ R
Sbjct: 339 VVRLKAAAAALGYDADAVEVLIGQMVNLVKDGQPVRMSKRAGTVIALDDLVEAVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       +D D   +++QS +NPV+YVQYA+AR  ++ R A ++           +
Sbjct: 399 YALIRSSIDVNIDIDLDLLRKQSADNPVYYVQYAHARLSALARHAAELG-------LSLS 451

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E   D +E  LI  + ++  V+  A   +EP++++ YL  LA  +H  ++  R  P
Sbjct: 452 TEHLELLDDEAEGDLIRTIGDFSEVVATAATLREPHRVSRYLESLAGAYHRFYARCRVLP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +   RL L  A   ++ +GL ++GV +P  M
Sbjct: 512 QG---DEEPGDVHAARLALCAATRQVLANGLALVGVSAPERM 550


>gi|111225301|ref|YP_716095.1| arginyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123142636|sp|Q0RD93|SYR_FRAAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|111152833|emb|CAJ64578.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 552

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 198/582 (34%), Positives = 303/582 (52%), Gaps = 34/582 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  +   +        ++  +   + +ERP+   HG  ++  A+ L++     P  +
Sbjct: 4   ADLADAIVAAIGRAVADGDLDVTVPTTVTVERPKTAGHGDYASPVALQLAKAARRKPREV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE++  R+     + SV IAG GF+N  L+   L +I  ++V +G  YG     +G +VN
Sbjct: 64  AEVLAGRLATQSGIASVDIAGPGFLNFTLAGDALGEIARTVVRAGESYGHAAKPRGVRVN 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+ +   R A VGD LA ++  +G+ V  EYY+NDAG QI     SV   
Sbjct: 124 LEFVSANPTGPVTLASARWAAVGDALARILTAAGFSVGGEYYVNDAGVQIERFGASVLAA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                     ++P   Y G Y+  +   +      +LL+ PE+  L +  +  +  M+  
Sbjct: 184 AA------GREIPAEGYHGAYVAEIAAAVLAG-RPDLLDLPEDAALAVTTEEGLALMLTE 236

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IR  L+   +  D + SE   H      +   ID+L  QG+VY+                
Sbjct: 237 IRSTLEGFGVHFDRWASERALHT--AGALTKAIDDLRAQGHVYDA--------------- 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +  R+T  GDD DRPL+KSDG  TYF AD AY++ K  RGFD +IY++G+DH GYV
Sbjct: 280 -DGAVWLRTTDFGDDKDRPLVKSDGQPTYFCADAAYYRDKRGRGFDQLIYLLGADHHGYV 338

Query: 365 KRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+A++A   +  A  ++V++ +LV L R G P+KMSKRAG F+TL  +VD VG D+ R
Sbjct: 339 ARLKAISACFGDDPATNLDVIIGQLVTLSRGGAPVKMSKRAGTFLTLHDLVDAVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D   V  Q+ +NPVFYVQYA+AR  S+ R A+ +      +     
Sbjct: 399 YSLVRSSLDSSLDLDLDLVTRQTSDNPVFYVQYAHARISSLLRNAEALGLPTASETADVA 458

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++         E+ L+  L E+PRVIE A   + P+++A YL +LA V+H  +   R  P
Sbjct: 459 LLTH-----PREVDLLRGLGEFPRVIEAAASLRGPHRVARYLEELAGVYHRFYDACRVLP 513

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          LT  RL LV A   ++ +GL ++GV +P  M
Sbjct: 514 QG---DEEAGPLTGARLLLVAATRVVLANGLGLLGVSAPERM 552


>gi|325917527|ref|ZP_08179730.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536243|gb|EGD08036.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 555

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 191/583 (32%), Positives = 306/583 (52%), Gaps = 37/583 (6%)

Query: 11  LKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +   ++ +     +    L    V+ERP+   HG  +TNAAM+L++    +P  +A+ +V
Sbjct: 2   IGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNPRALAQALV 61

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           A +    DV  V IAG GFIN +L+P+  ++ ++ ++  G +YGR L G G  V +E+VS
Sbjct: 62  AALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGNDYGRGLAGNGRSVGVEYVS 121

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+HVGH R A +GD+LA ++  +G+ V RE+Y NDAG QI  LALSV  R  Q L
Sbjct: 122 ANPTGPLHVGHGRAAAIGDSLARVLEANGWNVKREFYYNDAGVQIENLALSVQAR-AQGL 180

Query: 190 YNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             + +  PE  Y G Y+  V          D     +    +   L  ++ ++V  +   
Sbjct: 181 TPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVSGSKDPADLESIRRFAVAYLRNE 240

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
              DL A  +  DI+  E   ++     + + +  L   G+ YE                
Sbjct: 241 QNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE---------------- 282

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           +   L  +ST  GDD DR + KSDG+YTYF  D+AY   K++RG++  I  +G+DH G +
Sbjct: 283 EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSL 342

Query: 365 KRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            R+ A   A+     +     +L ++V + RDG  +K+ KRAG +ITLR +++E  +D+V
Sbjct: 343 TRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYITLRDLIEETSADAV 402

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ ++ RK    L FD    + QS +NPVFYVQYA+AR  S+ RQA++     +      
Sbjct: 403 RWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGFKYEQ---AN 459

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            +       D   L +++ L+ YP V++ A  A EPY++A YL +LA  FH  + + +  
Sbjct: 460 GLAQLARLDDEHSLNVMLELSRYPEVVDIAGQALEPYQIAQYLRELAHAFHTWYHNTK-- 517

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +  ++      +L L  A   ++ +GL ++GV +P +M
Sbjct: 518 -----LLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 555


>gi|84494550|ref|ZP_00993669.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84384043|gb|EAP99923.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 548

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 192/581 (33%), Positives = 309/581 (53%), Gaps = 38/581 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + SS ++  L E          +   + +ERP++  HG  STN A+ L++  G+ P  +A
Sbjct: 5   ELSSAIRAALLEATAAGDFTVDVPGEVRVERPKNRGHGDWSTNIALQLAKTAGMPPRDLA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +  R++    +  V +AG GF+N+ L  +   ++  +IV SG  YG+N    G  +N+
Sbjct: 65  TRLAERLRAMDGIAQVDVAGPGFLNIGLDAASAGELARNIVESGTAYGKNDSEAGHTINL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF+SANPTGP+H+GH R A +GD++  L+  SG +VT EYYINDAGAQ++  ALSV    
Sbjct: 125 EFISANPTGPLHIGHTRWAALGDSMRRLLTASGADVTAEYYINDAGAQMDKFALSVLAGA 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +          PEG YPG Y+  + K + ++   ++L+ PE++ + + +  +  A +  I
Sbjct: 185 K------GQPTPEGGYPGAYIGDLAKAVVEQ-RPDVLDLPEDEAIAVARPLAYTAQLAEI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L+   +  D++ SE + H G    +   ++ L  QG+V                D  
Sbjct: 238 QQTLERFGVFFDVWFSEQELHDG--GAVEKAVERLREQGHV----------------DDK 279

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  R+T   DD DR L+++DG  TYFAAD AY+  K +RGF   IY++G+DH GY+ 
Sbjct: 280 DGAVWLRTTDFTDDKDRVLIRADGVPTYFAADAAYYLSKKDRGFTEKIYLLGADHHGYIG 339

Query: 366 RLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           RL+A+AA   +     I+V + +LV L       K+SKRAG+ I L  ++D +G D+VR+
Sbjct: 340 RLKAIAACAGDDPEVNIDVRIGQLVNL----NGAKLSKRAGNIIELNDLLDWIGKDAVRY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +        L  D  ++++Q+ +NPVFYVQYA+AR  ++ R A +     D    P   
Sbjct: 396 NLARYPADSPLSLDGEELRKQTNDNPVFYVQYAHARTANVSRLAGEDGVRRDDGFDPA-- 453

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E  L+  L ++PRV+  A   +EP+++A YL DLA  +H  +   R  P 
Sbjct: 454 ----LLTDATEATLLAILGDFPRVVAQAAQLREPHRVARYLEDLAGRYHKWYDTCRVRPM 509

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +     L   RL L  A   ++ +GL+++GV +P  M
Sbjct: 510 N--AEEEVTDLHRTRLWLNDATRQVLANGLDLLGVSAPERM 548


>gi|254468228|ref|ZP_05081634.1| arginyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087038|gb|EDZ64321.1| arginyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 552

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 186/586 (31%), Positives = 302/586 (51%), Gaps = 41/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ N L +   ++ +E   +D I IERP+   HG  S+N A+ L++ +  +P  +A+
Sbjct: 1   MKNQISNILSDALQQLNIEISEVD-IHIERPKTLEHGDYSSNIALQLAKGMKKNPREVAQ 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+ ++  +     + +AG GFIN +LS      I+  I+    +YGRN  G   K+ +E
Sbjct: 60  LIIDQVGSEQLFSKLELAGPGFINFHLSDIGRSLIIKEIIQKDDQYGRNTSGAKQKLQVE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R A +GD+LA +M  +G+EVTRE+Y NDAG QIN LALSV  R  
Sbjct: 120 FVSANPTGPLHIGHGRGAAIGDSLARIMDANGWEVTREFYYNDAGQQINNLALSVQSR-L 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAM 241
           + +   D+D PE  Y G Y+  + +              +        L  +K +SV  +
Sbjct: 179 KGVTPEDADFPEDGYRGDYILEIAEAFKILSSITVDRETVTATGNVDDLEAIKQFSVAFL 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 DL A     D+F  E  F+  +   + +++  L   G+ Y+             
Sbjct: 239 RNEQNIDLAAFQTHFDVFTLESSFYENE--AVHEVVQLLTDNGFAYK------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                     R+T  GDD DR ++KSDG YTYF  D+AY   K++RGF  +I   G+DH 
Sbjct: 284 ---KEDATWLRTTDFGDDKDRVMVKSDGGYTYFVPDVAYHLNKWQRGFVRVINEQGADHH 340

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             + R+ A    +     +     +L ++V + ++   +K+SKRAG ++TLR ++D+VG 
Sbjct: 341 STITRVRAGLQGLQKKIPQDWPEYVLHQMVTVTKNNQEVKISKRAGSYVTLRDLIDQVGC 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ RF ++ RK    L FD      Q+ ENPV+Y+QYA+AR  ++  Q++          
Sbjct: 401 DATRFFLIARKPDSQLVFDIDLATSQTNENPVYYIQYAHARICAVLNQSE-------LGQ 453

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                  +       E QLI  L+E+P +I  A     P+ +A +L DLA  FH +++  
Sbjct: 454 DQLLQFNEVLLSTKHEHQLIKRLSEFPEIISLAAEESSPHYIATFLKDLAGDFHSYYNAN 513

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +          +++ +   RL L+ A  +++ +GL ++GV +PN+M
Sbjct: 514 KF-------LIDDQNIKCARLALILATKNVLRNGLQLLGVSAPNKM 552


>gi|153872908|ref|ZP_02001666.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS]
 gi|152070626|gb|EDN68334.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS]
          Length = 585

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 198/612 (32%), Positives = 307/612 (50%), Gaps = 64/612 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L ++  K  + K I  +I +ER RD  HG  + N AM L++ L + P  +A 
Sbjct: 5   LHTLLTQALTQLQSKGDIPKDIEPQIHLERTRDNQHGDFACNVAMALAKILKMRPRDLAT 64

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            IV ++ K D  +  + IAG GFIN++LS      ++  I+ +   YG++ +G G  V I
Sbjct: 65  QIVEQLPKDDELIAKIEIAGPGFINVFLSQKAYDTVIEDILTAKETYGQSQVGAGQSVMI 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G  LA+L+  +G++V +EYY+NDAG Q++ LA+SV+ RY
Sbjct: 125 EFVSANPTGPLHVGHGRGAAYGAALANLLTVAGFKVHKEYYVNDAGRQMDILAISVWLRY 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL------------------------ 221
            + L       P   Y G Y+  +   L  +    L                        
Sbjct: 185 LE-LCGETITFPSNGYQGDYVWDIAASLHRERGDALRQDSKIVFDNVPPDINQGGDKELH 243

Query: 222 --------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E+   I+    +  ++  IRDDL+   + +D + SE +        +
Sbjct: 244 VDALIDRSKQLLGEESYHIIFQRGLGIILAEIRDDLEQFGVVYDEWFSESNL--TTTHTV 301

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              I+ L   G++YE                    L FRS+  GD+ DR +++ +G +TY
Sbjct: 302 ARAIEQLKATGHIYE----------------QDGALWFRSSAFGDEKDRVVVRENGQFTY 345

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F++D+AY   K ERGFD +I + G+DH GYV R++A   A+     ++ VLL +   LYR
Sbjct: 346 FSSDIAYHLNKLERGFDYLINIWGADHHGYVSRVKAAMTALGADAQRLTVLLVQFASLYR 405

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
               ++MS R+G+F TLR +  EVG D+ RF  + RK+ + L+FD    K Q  +NPV+Y
Sbjct: 406 GKERLQMSTRSGEFATLRELRSEVGRDAARFFYIQRKSEQHLNFDLELAKSQKNDNPVYY 465

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQYA+ R   +FR+ +D       +    + + Q       E  L+V L+ Y  +IE A 
Sbjct: 466 VQYAHTRIAGVFRELRDKNLVWHHNKALLSKLTQAH-----ERALLVMLSRYSEMIEAAA 520

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
            + EP++L +YL DLA  FH  +   +       +  ++  L   RL L  A   ++++G
Sbjct: 521 HSYEPHQLTYYLRDLAQQFHTCYDSHK-------ILIDDEDLRNARLSLSAACQQVLHNG 573

Query: 574 LNIIGVESPNEM 585
           L II V +P  M
Sbjct: 574 LTIISVSAPEVM 585


>gi|323524573|ref|YP_004226726.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323381575|gb|ADX53666.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 596

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 190/615 (30%), Positives = 310/615 (50%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL ++P  
Sbjct: 9   LETLLADTVKQVALATQGATEAAFVSPTIALERPKVAAHGDVACNVAMQLAKPLRVNPRQ 68

Query: 64  IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +    +    ++S  +AG GFINL L+ +  + ++++++     YGR+    
Sbjct: 69  LAQQIVDTLLGQPQAQGLIESAEVAGPGFINLRLAAAAKQAVVTAVLAEQDAYGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD L++++A  G++V RE+Y NDAG QI TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  P+  Y G Y+  + K+              +    + + L  +
Sbjct: 189 STQARAR-GLAPGDAGWPDSAYNGEYIADIAKDYLNGVTVSASDGEPVTGARDVENLDAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   +      +   +  L   G  YE     
Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVQALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+  + K  +   +  L   ++ P  SE     + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVIAECKARYGADESALAKVDLAPLSSE---RAMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++   E      V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL IIGV +P +M
Sbjct: 582 ANGLAIIGVSAPVKM 596


>gi|115373269|ref|ZP_01460569.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310824517|ref|YP_003956875.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115369715|gb|EAU68650.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309397589|gb|ADO75048.1| Arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 592

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 193/593 (32%), Positives = 311/593 (52%), Gaps = 18/593 (3%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + + + L  +     ++ +++    +E P++ AHG  S N AM+L++  G  P 
Sbjct: 1   MRQKVRALINDTLTALKNAGTLKLELVPGYTVEAPKNPAHGDWSVNVAMMLTKAEGKPPR 60

Query: 63  TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK-G 120
            IA+ IV  +      V  V +AG GF+N  L     +++   ++ +G  +G       G
Sbjct: 61  DIAQAIVKGLVDPQGIVTKVDVAGPGFLNFTLKEQVHQQVAREVLQAGETFGHQAPKSTG 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +EFVSANPTGP+H+GH R A +GD +A L+  +G++VTRE+YIND G Q+ TL  +
Sbjct: 121 KRVLVEFVSANPTGPVHIGHARGAFMGDAVARLLEAAGHDVTREFYINDYGKQVETLGRT 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  RY+Q L+    +L EG YP  Y+  + K+  +    + L+ PE +WLP      ++ 
Sbjct: 181 VHKRYRQ-LFGQQVELGEGEYPAEYVIDIAKDWKEAVGDKYLHLPESEWLPEAMAVGIRE 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP------- 293
            +K IR  L+  NI+HD+F SE   H      +  I+D   R+G  YE            
Sbjct: 240 NLKAIRATLQQANIRHDVFFSEASLHT--SGKVLAIVDEYKRRGATYEAAEAERTGEKVR 297

Query: 294 -PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
              SK  Q  D  R     R++  GDD DR +L+ DG+  Y  ADLAY + KY RGFD +
Sbjct: 298 HEDSKAAQYTDRQRGGTFLRTSQHGDDEDRIILRHDGTPVYLTADLAYHQEKYNRGFDRI 357

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I V G+DH+G+  R+ A    +     ++  LL +LVR+ R G  +K+SKR G    L  
Sbjct: 358 IDVFGADHAGHTPRISAGMTLLGLDAKKLEFLLVQLVRITRGGEEVKVSKRKGTVFELED 417

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++ E G+D  RF+ L +  +   DFD   VK+QSK+NPVFY QY +ARC SI ++A +  
Sbjct: 418 LIHEAGADVCRFLFLVKTANSRFDFDLDLVKKQSKDNPVFYFQYGHARCASILKKAAEKG 477

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                 L               EL ++  +++ P V+ +A    EP+ + ++  +L + F
Sbjct: 478 TPF-VGLEGLTPAHLARLTLPEELSMLKKMSQLPDVVASAAERLEPHHVLYFCQELITDF 536

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H +++  + +P    + + + + T  RL LV A+   + S   ++G+++P  M
Sbjct: 537 HSYYTKYKTDP----IISGDSEKTQGRLGLVAALKQTLRSAFALLGIQAPEYM 585


>gi|319778817|ref|YP_004129730.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108841|gb|ADU91587.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 560

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 189/567 (33%), Positives = 297/567 (52%), Gaps = 47/567 (8%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKG 87
           I +ERP++  HG LSTN AM L++PL  +P  +A+ IV  ++ +P      DSV IAG G
Sbjct: 28  IQLERPKNPEHGDLSTNIAMQLAKPLKKNPREVAQDIVDTLQSNPSYNLLLDSVEIAGPG 87

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN   + S  + I+  I      YG N      KV +EFVSANPTGP+HVGH R A +G
Sbjct: 88  FINFKFNVSVHQDIIHLIQSQKEIYG-NSPKNYKKVIVEFVSANPTGPLHVGHARQAALG 146

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +  L+  +GY++ RE+Y NDAG QIN LA SV  R  + +  +  D P   Y G Y+ 
Sbjct: 147 DCICRLLEAAGYDIYREFYYNDAGNQINNLASSVQAR-LKGIDPDHPDFPADGYRGDYIN 205

Query: 208 HVGKELADKYSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            + ++   K + +  +       + + L  ++ ++V  + +    DL A N++ D +  E
Sbjct: 206 DIARDFITKETVKADDIEITASGDVENLNDIRKFAVAYLRREQDLDLLAFNLKFDRYYLE 265

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDV 320
              +      + + ++ L   G+ YE                    L  R+T +G  DD 
Sbjct: 266 SSLYT--DGKVEETVNTLTSNGHTYE----------------QDGALWLRTTELGTGDDK 307

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKK 378
           DR + KSDG+YTYF  D+AY K K++RG+   I + GSDH G V R+ A    +     K
Sbjct: 308 DRVMRKSDGTYTYFVPDVAYHKTKWDRGYQKAIDIQGSDHHGTVARVRAGLQGLNLGIPK 367

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
              + +L ++VR+ R+G  +K+SKRAG ++T+R ++D VG D+ R+ ++ RK      FD
Sbjct: 368 DYPSYILHKMVRVMRNGEEVKISKRAGSYVTMRDLIDWVGQDATRYFLIQRKADTEFTFD 427

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                 + +ENPVFY+QYA+AR   + + A ++   +D                 SE+ L
Sbjct: 428 IDLALSKKEENPVFYIQYAHARICKLLKDAGELAGQVDQADISL-------LTAPSEINL 480

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  L+E P +I+ A     P+ +AF+L DLA  FH  +S  +       V  ++  L + 
Sbjct: 481 LKRLSELPDLIQIAIKELSPHLVAFWLTDLARDFHSWYSSEK-------VFVDDISLKLA 533

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   ++ + L+++GV +P +M
Sbjct: 534 RLALADATKQVLANALDLLGVSAPTDM 560


>gi|30248381|ref|NP_840451.1| arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|39932153|sp|Q82XC1|SYR_NITEU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|30138267|emb|CAD84275.1| Arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 586

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 193/613 (31%), Positives = 307/613 (50%), Gaps = 67/613 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S     L +   +  +  ++  +I + RP+   HG  S+N AM L+R L  +PL +A
Sbjct: 8   DFKSHCIQLLDQA-ARQVLPDEVGVQIELLRPKLADHGDYSSNLAMKLARRLRRNPLELA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + ++  +     V+   +AG GFIN +L  +  ++ L +++ +G  +G + +G G  + I
Sbjct: 67  KALIGALPDSSCVEKADVAGGGFINFFLKKTAKQQFLHAVLQAGDSFGHSRLGAGKTIQI 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA++M  +GY VTRE+Y+NDAG Q++ L LS + RY
Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANIMTAAGYAVTREFYVNDAGRQMDILTLSTWLRY 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------------------FPEE 227
              L       P   Y G Y+  +  E+         +                    E+
Sbjct: 187 LD-LCGLSFSFPANAYRGQYVADMASEIYQAQGDRYAHRSDATIRQLTEISTSTTIDSED 245

Query: 228 KWLPI---------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           + L                 + ++ +   +   R+DL    ++ + + SE      D   
Sbjct: 246 ERLDRLITAAKSILDQDYADLHNFVLTEQLADCRNDLMEFGVEFETWFSEQSLF--DSGM 303

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +  L  +  +Y                     L FRST  GD+ DR + + +G YT
Sbjct: 304 VARAVQLLDDKKLLYR----------------QDGALWFRSTDFGDEKDRVVQRENGLYT 347

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY   KYERGFD ++ + G+DH GY+ R++    A+S    ++ + L +   LY
Sbjct: 348 YFASDIAYHLSKYERGFDYLLNIWGADHHGYIPRVKGAIEALSLDPGRLEIALVQFAVLY 407

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RDG  + MS R+G+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+
Sbjct: 408 RDGKKVSMSTRSGEFVTLRQLRQEVGNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVY 467

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  S+  Q          D+  R     E   D +EL L+  + ++   IE A
Sbjct: 468 YVQYAHARICSVLGQWGGA-----EDILARA--ETELLTDPAELVLLQKMIDFTDTIEAA 520

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              + P+ +AF+L +LA  FH +++  R           +  L + RL L+ AV  I++ 
Sbjct: 521 AKERAPHLIAFFLRELAGEFHSYYNSTRF-------LVEDESLKITRLALISAVRQILSK 573

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P EM
Sbjct: 574 GLTLLGVTAPREM 586


>gi|312194803|ref|YP_004014864.1| arginyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226139|gb|ADP78994.1| arginyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 558

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 193/583 (33%), Positives = 302/583 (51%), Gaps = 30/583 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  + + ++       ++  +   + +ERP++  HG  ++ AA+ L++     P  +
Sbjct: 4   ADLADVIVSAVRAAVTDGAIDVAVPATVPVERPKNPEHGDYASPAALQLAKAARRAPREV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AEL+  R++ DP + +V +AG GF+N+ L+   L ++  +IV +G  YGR    KG +VN
Sbjct: 64  AELLADRLRKDPGIATVDVAGPGFLNIKLASDALGELARAIVRAGEAYGRAPQRKGVRVN 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+ +   R A VGD L  +   +GY+   EYY+NDAG QI     SV   
Sbjct: 124 VEFVSANPTGPVTLASTRWAAVGDALVRIFDAAGYDTASEYYVNDAGVQIARFGASVLAA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          PE  Y G Y+  +   L   +   LL   + + L +     +  M+  
Sbjct: 184 AK------GEPTPEDGYHGAYVAEIAARLLADHPD-LLAGDDAQALAVAARDGLALMLTE 236

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IR  L+   +  D++ SE   H  +   +   + +L   G+VY+                
Sbjct: 237 IRSTLEGFGVHFDVWKSELSMH--EAGELEAAVADLRTHGHVYDA--------------- 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +  R+T  GDD DRPL+KSDG  TYF AD AY++ K  RGFD ++ ++G+DH GY+
Sbjct: 280 -DGAVFLRTTDFGDDKDRPLIKSDGQPTYFCADAAYYRNKRGRGFDRLVLLLGADHHGYI 338

Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+A+AA   +   + ++V++ +LV L R G P+KMSKRAG+F+TL  +VD VG D+ R
Sbjct: 339 GRLQALAACFGDNPDESLDVIIGQLVTLSRGGEPVKMSKRAGNFLTLADLVDVVGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPR 482
           + ++       LD D   + +Q+ +NPVFYVQYA+AR  S+ R A  +     D      
Sbjct: 399 YSLVRSSLDSSLDLDLDLIAKQTNDNPVFYVQYAHARIASLLRNAAALGITPADGPGAVL 458

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           + I         E  L+  L E P V+ +A   + P+++A YL +LA  +H      R  
Sbjct: 459 DGIDVSLLEHPREGDLLRALGELPTVVASAASLRAPHRVARYLEELAGTYHRFNDACRVL 518

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           PR          LT  RL LV A   ++ +GL ++GV +P  M
Sbjct: 519 PRG---DEEPTPLTAARLLLVEATKVVLANGLRLLGVSAPERM 558


>gi|226226873|ref|YP_002760979.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090064|dbj|BAH38509.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 561

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 192/584 (32%), Positives = 307/584 (52%), Gaps = 43/584 (7%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +  L+  L      +     +    V+ERPRD + G  +TN AM L++PLG  P  +AE 
Sbjct: 15  ADALRAELVRAARSLGAPDDVAP--VLERPRDPSFGDWATNLAMTLAKPLGKKPRDLAEA 72

Query: 68  IVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           ++A +      + +  IAG GFIN  L P +  + L  I+ +  ++GR+ IG+G +V +E
Sbjct: 73  LIAALDTARVGISAAEIAGPGFINFRLDPGFQARGLLQILAAPEQWGRHNIGQGERVVVE 132

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD +++L+ ++G+ V RE+Y NDAGAQI  LA S   R +
Sbjct: 133 FVSANPTGPLHVGHGRQAALGDAISTLLEWTGWNVDREFYYNDAGAQIANLAKSTQARVR 192

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + +   + ++PEG Y G Y++    E+A++Y ++     E K L  +++++V A+     
Sbjct: 193 E-IGGAELEIPEGGYHGEYIR----EIAERYVAQHAVDAEGKDLEAMREFAVAALRHEQD 247

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL+A  ++ D +  E   +      +   ++ L + GY +E                D 
Sbjct: 248 LDLQAFGVKFDTYYLESSLYT--DGRVDKTVEALKQSGYTFE----------------DN 289

Query: 307 KQLLFRSTMVGDDVDRPLLKSD---GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             L  R+T  GDD DR + KS+   G YTYF  D+AY   K+ERG+   I V G+DH   
Sbjct: 290 GALFLRTTAFGDDKDRVMKKSEAKGGDYTYFVPDVAYHVTKWERGYHRAINVQGADHHST 349

Query: 364 VKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             R+ A   A+     +   + +L ++V + + G  +K+SKRAG ++T+R ++DEVG D+
Sbjct: 350 TTRVRAGLQALGIGIPQGYPDYVLHQMVTVMKGGEEVKISKRAGSYVTVRDLIDEVGRDA 409

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VR+  L RK    L FD    + QS+ENPV+YVQ A+AR   IFR       ++D     
Sbjct: 410 VRYFYLMRKGDSQLVFDVDLARSQSEENPVYYVQMAHARMCGIFR-----VGEIDATGVT 464

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +      + +E +LI  L ++P +++ A    EP+++A +L + A   H  +     
Sbjct: 465 AEGVDLGVLSEPAEQELIKQLLDFPAIVKGAADNLEPHRIAGWLLETARAAHTWYHKHH- 523

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V      +T  RL L  A    I +GL I+G+ +P  M
Sbjct: 524 ------VLGEPEAITRARLVLARATQLGIAAGLRILGLTAPERM 561


>gi|167036620|ref|YP_001664198.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115047|ref|YP_004185206.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855454|gb|ABY93862.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928138|gb|ADV78823.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 562

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 199/591 (33%), Positives = 322/591 (54%), Gaps = 38/591 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +       +K+     +K    +  +  +++  I IE P++  HG L+ N AM++++  
Sbjct: 3   NIIQKVKDEIKDMVTTAIKNSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62

Query: 58  GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + IAG GFIN +L   +L + L  +   G +YGR  
Sbjct: 63  KMPPKKIAEIIVSKMDPSNTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG G KV +EFVSANPTGPMH+G+ R   +GD LA+++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E     + DY
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALIDY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL    I++D++ SE   +  D   +  +I+ L ++GY YE        
Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++++G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V  ++    A+     +++V+L +LV+L   G  +KMSKR G  +TLR ++D
Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++    +
Sbjct: 404 EVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463

Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           D  D    +++ +E E +  +       A +P  I  A     P+++  Y+ D+AS+FH 
Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYILDVASLFHS 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V+     L   R  L+ AV ++I + L+I+ + +P  M
Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562


>gi|256751682|ref|ZP_05492557.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749491|gb|EEU62520.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 562

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 199/591 (33%), Positives = 323/591 (54%), Gaps = 38/591 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +       +K+     +K    +  +  +++  I IE P++  HG L+ N AM++++  
Sbjct: 3   NIIQKVKDEIKDMVTTAIKNSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62

Query: 58  GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + IAG GFIN +L   +L + L  +   G +YGR  
Sbjct: 63  KMPPKKIAEIIVSKMDPSNTFIERIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG G KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E+    + +Y
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDVPSEERRKALIEY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL    I++D++ SE   +  D   +  +I+ L ++GY YE        
Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++S+G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V  ++    A+     +++V+L +LV+L   G  +KMSKR G  +TLR ++D
Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++    +
Sbjct: 404 EVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463

Query: 476 -DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            + D    +++ +E E +  +       A +P  I  A     P+++  Y+ D+AS+FH 
Sbjct: 464 ENIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V+     L   R  L+ AV ++I + L+I+ + +P  M
Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562


>gi|148652106|ref|YP_001279199.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048457|sp|A5WC58|SYR_PSYWF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148571190|gb|ABQ93249.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 609

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 187/627 (29%), Positives = 304/627 (48%), Gaps = 70/627 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            +  + L +  K +  +  +     +   I R +   HG  ++N A+  ++    +P  +
Sbjct: 7   DEIFALLDSAAKVLIDQGVLPADWQNNSQITRSKSPEHGDYASNIALTAAKAAKSNPRAL 66

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE + A +  +  +  + IAG GFIN++L+      +L +I     +YG        K+ 
Sbjct: 67  AEQLTAALPANDSIAKLEIAGPGFINIFLNTDAKFAVLDAIFAKNQKYGLTDEFANKKIQ 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPT  +HVGH R A  G ++A+L+   GYEVTREYY+NDAG Q++ LA S + R
Sbjct: 127 VEFVSANPTSSLHVGHGRGAAFGMSVANLLEAVGYEVTREYYVNDAGRQMDILATSTYLR 186

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------YSSELLNFPEEK-------- 228
           Y Q L       P G Y G Y+  + + +  +        Y+    N PE++        
Sbjct: 187 YLQ-LNGEQIHFPVGGYQGDYVTDIAQTIKTQQNDAYVHSYADISANAPEDEVSEVNDAG 245

Query: 229 --------------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
                                        +  + ++  ++  I+DDL    ++ + + SE
Sbjct: 246 EKEVVSGDKNAHIDVIIANSKQALGDNYAVFLNAALSEILGDIKDDLNEFGVRFERWFSE 305

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                     I  ++  L  +G++YE                    + FRST  GD+ DR
Sbjct: 306 KSI----ADEIEPVLAELDSKGHLYE----------------KDGNIWFRSTDFGDEKDR 345

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            + +++G  TYFA+D+AY K K+ERGFD +I V G+DH GY+ R+ A   A+   + ++ 
Sbjct: 346 VVRRANGLTTYFASDIAYHKNKFERGFDTVINVWGADHHGYIARVRAALTALGIDEKRLE 405

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V+L + V L+R    I+MS R+G F+TLR + +EVG+D+ RF  + RK    +DFD    
Sbjct: 406 VILVQFVALWRGEEKIQMSSRSGKFVTLRELREEVGNDAARFYYVARKPEVHIDFDLELA 465

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K QSK+N V+Y+QYA+AR  S+  +      D+D     +    Q      +E +LI  L
Sbjct: 466 KSQSKDNAVYYIQYAHARVCSVLEKLAAKGFDVD---DAQGSAQQHLLTADAESELIKLL 522

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA----NNRKLTMM 558
           A YP  ++ A    +P+ L  YL DLAS+FH  ++  R  P               +   
Sbjct: 523 AAYPATLKRAATGYDPHVLTNYLKDLASLFHAWYNDNRILPVSIIADETPSQEELDMMQA 582

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL+L  AV  ++ +GL+++G+ +P  M
Sbjct: 583 RLRLSKAVRQVLANGLSLLGLSAPTSM 609


>gi|78484543|ref|YP_390468.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|109895050|sp|Q31J79|SYR_THICR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78362829|gb|ABB40794.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 592

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 197/618 (31%), Positives = 315/618 (50%), Gaps = 67/618 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             +  L   + +   +  ++     R+ +E  RD +HG  +TN AM+L++ +G  P  +A
Sbjct: 4   QVAEILSKVIDQFKQEGVLDASFQPRVNVENTRDKSHGDFATNLAMMLTKVVGKPPREVA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E+IVAR+     ++ V IAG GFIN ++       +L SI+ +G  +G   +G+G  V +
Sbjct: 64  EMIVARLPESDVIEKVEIAGPGFINFFVLDVAKFDVLPSILEAGETFGECNVGQGRSVLV 123

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+HVGH R A  G ++ASL++ +G+ V+REYY+NDAG Q++ LA S + RY
Sbjct: 124 EYVSANPTGPLHVGHGRGAAYGASVASLLSKAGFRVSREYYVNDAGRQMDILAASTWLRY 183

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226
            Q     +   P   Y G Y+  + + L ++    L    E                   
Sbjct: 184 LQHC-GEELTFPSNGYKGDYIFDIAQSLYEEKGDALRKPAENVFEGVADDEVTTADGETL 242

Query: 227 -------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              ++   +V D ++ A++  IR+DL    ++ + + SE     
Sbjct: 243 GDKEKHIDDLIEKTKVLLGDEHYRVVFDKALDAILGDIREDLAEFGVEFENWFSERSL-- 300

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            D   I   ++ L   G +YE                 +  L F+S+  GD+ DR +++ 
Sbjct: 301 MDSGVIDAALEKLQAAGKIYE----------------KKGALWFKSSEYGDEKDRVVVRE 344

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +G  TYFA+D+AY   K ERGFD +I + GSDH GYV R++A   A+      + VLL +
Sbjct: 345 NGLKTYFASDIAYHFNKLERGFDVLIDIWGSDHHGYVPRVKAAMQALDTNPEALEVLLVQ 404

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
              LYR G  + MS R+G F+TLR + DEVG+D+ RF  + RK+ + +DFD    K +S 
Sbjct: 405 FAVLYRGGEKLAMSTRSGQFVTLRELRDEVGADAARFFYVQRKSEQHMDFDLDLAKSKSN 464

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ENPV+Y+QYA+AR   +   A++    LD ++    +          E  L   LA+YP 
Sbjct: 465 ENPVYYIQYAHARICQVLSLAEERGYQLDTEM---GLANLNRLTQEPEADLATLLAKYPE 521

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           +I  A +A EP+++A+YL +LA   H +++  +              L   RL LV AV 
Sbjct: 522 IIARAALAYEPHQIAYYLKELAHGLHAYYNSTQF-------IVEYEPLRNARLTLVVAVR 574

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++ V +P +M
Sbjct: 575 QVLQNGLKLLSVAAPEKM 592


>gi|326390823|ref|ZP_08212375.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993082|gb|EGD51522.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 562

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 199/591 (33%), Positives = 323/591 (54%), Gaps = 38/591 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +       +K+     ++    +  +  +++  I IE P++  HG L+ N AM++++  
Sbjct: 3   NIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVMAKQA 62

Query: 58  GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + IAG GFIN +L   +L + L  +   G +YGR  
Sbjct: 63  KMPPKKIAEIIVSKMDPSNTFIERIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG G KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E+    + +Y
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDVPSEERRKALIEY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL    I++D++ SE   +  D   +  +I+ L ++GY YE        
Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++S+G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V  ++    A+     +++V+L +LV+L   G  +KMSKR G  +TLR ++D
Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++    +
Sbjct: 404 EVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463

Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           D  D    +++ +E E +  +       A +P  I  A     P+++  Y+ D+AS+FH 
Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V+     L   R  L+ AV ++I + L+I+ + +P  M
Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562


>gi|258652303|ref|YP_003201459.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555528|gb|ACV78470.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 551

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 188/580 (32%), Positives = 285/580 (49%), Gaps = 30/580 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             +  ++  L        +  ++   I ++RP+   HG  +T  AM L++     P  IA
Sbjct: 2   QLADAVRRALTSAVAAGDLAVEVPADIPLDRPKSREHGDYATPVAMKLAKAAHRPPRQIA 61

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E+I A +  +P +  V IAG GF+N+ +  +    ++  IV  G  YG      G +VN+
Sbjct: 62  EIIAAHLADEPGIAGVSIAGPGFLNISVETAAAASLVGRIVADGAAYGHGDALAGRQVNL 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+G  R A VGD L  +++  G  V REYY NDAGAQI+  A S+    
Sbjct: 122 EFVSANPTGPIHIGGARWAAVGDALGRILSTQGATVIREYYFNDAGAQIDRFARSLLAAA 181

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +Q         PE  Y G Y+  +   +    +      P+++   + +   V+ M   I
Sbjct: 182 RQQ------PAPEDGYGGDYIVEIAGRITA-ANPGAPQLPDDQATELYRAQGVELMFDEI 234

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L       D++  E+  H  +   +   +  L   G++                  +
Sbjct: 235 KATLHTFRTDFDVYFHENSLH--ESGAVGQAVQRLKDSGHL----------------TFN 276

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
                  S   GDD DR ++KSDG   Y A DLAYF  K  RGFD  IY++G+DH GY+ 
Sbjct: 277 DGAWWLNSKAYGDDKDRVVIKSDGQPAYIAGDLAYFLDKRARGFDLCIYMLGADHHGYIA 336

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           RL+A AAA  +    + VL+ ++V L RDG PI+MSKRAG  ITL  +++ +G D+ R+ 
Sbjct: 337 RLKAAAAAFGDDPDVVEVLIGQMVNLVRDGEPIRMSKRAGTVITLDDLIEALGVDAARYA 396

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ++       LD D      Q+ +NPVFYVQYA+AR  S+ R A D+   ++  L      
Sbjct: 397 LIRYSVDTTLDLDLDLWTRQTSDNPVFYVQYAHARLASLARNAADLG--IELGLRSGGAY 454

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    E +LI  LA +P V+  A   +EP+++A YL DLAS +H  +   R  P  
Sbjct: 455 DPALLDTARESELIALLAAWPGVLATAAELREPHRVARYLEDLASGYHKFYDSVRVLPMG 514

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     T+ RL L  A   ++ +GL ++GV++P  M
Sbjct: 515 ---DEEAGPATIARLWLCAATRQVLANGLAVLGVDAPERM 551


>gi|73539833|ref|YP_294353.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|109895024|sp|Q477C4|SYR_RALEJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72117246|gb|AAZ59509.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 595

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 193/615 (31%), Positives = 293/615 (47%), Gaps = 64/615 (10%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S L     +    +      L  +  ERP+  AHG L+ N AM ++R L  +P  +A+ I
Sbjct: 7   SNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRI 66

Query: 69  VARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           VA ++ DP    +     IAG GFINL L+P+    +L +++  G  YG    G    V 
Sbjct: 67  VAMVQADPRAAELVAGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVL 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD LA+L+++ GY+V RE+Y NDAG QI  LA+SV  R
Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLSWQGYDVHREFYYNDAGVQIQNLAVSVQAR 186

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238
            +      D++ PE  Y G Y+  +  +              +      + L  ++ ++V
Sbjct: 187 TR-GFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSIRKFAV 245

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +      DL+A  ++ D +  E   +      +   +  L  +G  YE          
Sbjct: 246 TYLRNEQDIDLQAFGVKFDHYYLESSLYT--DGRVEAAVQGLVGKGKTYES--------- 294

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I V GS
Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKTDGTYTYFVPDVAYHTTKWERGFTKVINVQGS 347

Query: 359 DHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           DH G + R+ A    +     K   + +L ++V + ++G  +K+SKRAG ++T+R +++ 
Sbjct: 348 DHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                    G D+VRF +L RK      FD     +Q+ ENPV+
Sbjct: 408 SNGGDETIRGCLDAGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD--TSELQLIVHLAEYPRVIE 510
           YVQYA+AR  SIF        +          +   +  D     L L   LAE+P ++ 
Sbjct: 468 YVQYAHARICSIFESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLA 527

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++
Sbjct: 528 AAAGELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVL 580

Query: 571 NSGLNIIGVESPNEM 585
            +GL +IGV +P  M
Sbjct: 581 RNGLAVIGVSAPRRM 595


>gi|307265113|ref|ZP_07546673.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919911|gb|EFN50125.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 562

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 199/591 (33%), Positives = 324/591 (54%), Gaps = 38/591 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +       +K+     +K    +  +  +++  I IE P++  HG L+ N AM++++  
Sbjct: 3   NIIQKVKDEIKDMVTIAIKNSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62

Query: 58  GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + IAG GFIN +L   +L + L  +   G +YGR  
Sbjct: 63  KMPPKKIAEIIVSKMDPSNTFIERIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG G KV +EFVSANPTGPMH+G+ R   +GD LAS++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E+    + +Y
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDAPSEERRRALIEY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL    I++D++ SE   +  D   +  +I++L ++GY YE        
Sbjct: 242 GLKENLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVHKVIEDLKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++S+G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRSNGIPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V  ++    A+     +++V+L +LV+L   G  ++MSKR G  +TLR ++D
Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVRMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++    +
Sbjct: 404 EVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463

Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           D  D    +++ +E E +  +       A +P  I  A     P+++  Y+ D+AS+FH 
Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V+     L   R  L+ AV ++I + L+I+ + +P  M
Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562


>gi|262377144|ref|ZP_06070369.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307882|gb|EEY89020.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 596

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 184/629 (29%), Positives = 315/629 (50%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + +  +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVHTLQAQGVLPSDWNNTSNLTRTKDRSHGDFASNIAMIASKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I      YGR  +   
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQQATYGRTQVNAD 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KRIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEKWLP- 231
            + RY + L   +   P+  Y G Y+K + + + D+     +        + PE+     
Sbjct: 179 TYLRYLE-LTGQELVFPKNAYQGDYVKEIAQSIIDQDGDAYVRPVADVYKDVPEDVQFAA 237

Query: 232 -----------------------------------IVKDYSVQAMMKIIRDDLKALNIQH 256
                                              +    +++A++  I+DDL    +  
Sbjct: 238 ELDADGNKVVLSGDKEKHIDGLIFNSQALIGTGYRVFLQAALKAILDDIKDDLGEFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE+         I + +  L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEESL----TDKIEEALQTLDQRGFLYEL----------------DGNIWFKSTAF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDIIDIWGSDHHGYIARVKAAIDALGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A     +++FD      +  + E D +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA--STNVNFDATAARNLAAKLELD-AET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP ++  A  + EP+++  YL +LA++FHG ++  +       V  ++ +LT
Sbjct: 515 EILAKLAAYPEILVRAANSYEPHQIGNYLKELAALFHGWYNDNK-------VLGDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSVNVRQVLRNGLELLGVSAPESM 596


>gi|118594231|ref|ZP_01551578.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440009|gb|EAV46636.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 552

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 200/586 (34%), Positives = 306/586 (52%), Gaps = 41/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L + L  I  K+   +    +IVIERP+   HG LS+N A+++++ L   P T+A+
Sbjct: 1   MKAHLTDLLFSIVNKM-TSELTQSQIVIERPKSIDHGDLSSNIALVIAKALKKSPRTVAQ 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV +I        + IAG GF+N Y S +   KI++  + +   YGR+  G   K+ IE
Sbjct: 60  EIVEKIPSTRSFSKIEIAGAGFLNFYFSSNTHNKIINDALENNKNYGRSNQGSRKKIQIE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD LA L  FSG++VTRE+Y NDAG+QI+ L  S+  R  
Sbjct: 120 FVSANPTGPLHVGHGRGAAIGDCLARLFEFSGWDVTREFYYNDAGSQIDNLTKSIKARCM 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAM 241
             L   D   PE  Y G Y+  + K    K      S    +  +      +K+Y +  +
Sbjct: 180 NVL-PEDPSFPEDGYRGEYISDIAKSYLAKKTIQNGSETFSSNGDTTDDDAIKNYGIHYL 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            K    DL+A  I+ D+F  E  F+      I+D++  L   G+ YE             
Sbjct: 239 RKEQDQDLEAFKIRFDVFSLESSFY--SQGKIKDVVTTLKNNGHTYE------------- 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++T  GDD DR + KSDG++TYF  D+AY   K+ERGF  +I   G+DH 
Sbjct: 284 ---KDGALWLKTTAFGDDKDRVMQKSDGAFTYFVPDIAYHLNKWERGFKRVINEQGADHH 340

Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V R+ A    +           +L +++ + ++G  +K+SKRAG ++TLR ++DEVG 
Sbjct: 341 STVNRVRAGLQGLDTGIPPGWPEYVLHQMITVMKNGQEVKISKRAGSYVTLRDLIDEVGC 400

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++ R+    L FD    K Q+ ENPV+Y+QYA+AR + +  Q           L
Sbjct: 401 DATRYFLIARRADSQLVFDIDLAKSQNNENPVYYIQYAHARIQRVLMQWGGEL----HSL 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E+     E +LI  + E+P V+E AT    P+++A YL + A+  HG+++  
Sbjct: 457 RSTAEYKYETLL---EKKLIKKIEEFPEVVEAATNDLAPHQIANYLKECAADLHGYYND- 512

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +F+  NN +    RL L+ A   II +GLN++G+ +P+ M
Sbjct: 513 -----TKFLVENNNE-KNGRLSLIFATQHIIKTGLNLLGISAPDSM 552


>gi|312876814|ref|ZP_07736792.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796433|gb|EFR12784.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 561

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 196/592 (33%), Positives = 323/592 (54%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L         + ++N +K    K   E   +  I+IE+P++ +HG  +TN AM L+R 
Sbjct: 1   MNLVKLAKQQIQTVVQNAIKHCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60

Query: 57  LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L  +P  IA+ I++ + + +  ++ V +AG GFIN +    +L K++  I+  G +YG+ 
Sbjct: 61  LKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   + +LPE  Y G  +    KE  D++  +L N   ++    + D
Sbjct: 181 KFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERREKLVD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ L+   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNISLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ + +   D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFAASKIDESLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEIVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGILRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD       ++ QE E +  +  L +        IE A    +  ++  YL DLAS+FH
Sbjct: 462 VLDKSKIKVELLQQEEELELLKKLLELP-----EEIEIAAKNLDVSRVTKYLLDLASMFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V+  N  L   RL LV  V  +I + L ++GV++P +M
Sbjct: 517 AFYNACR-------VKNENEDLMFTRLSLVECVRIVIKNMLRLLGVDAPEKM 561


>gi|146296397|ref|YP_001180168.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409973|gb|ABP66977.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 562

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 194/593 (32%), Positives = 327/593 (55%), Gaps = 39/593 (6%)

Query: 1   MYLFADFSSRLKNYLKE-----IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55
           M L      ++K+ +++     I+  I     ++  I+IE+P++ AHG  +TN AM L+R
Sbjct: 1   MNLVKLAKDQIKDTIEKAINTCIEKGIFQLNYVVPPIMIEKPKEKAHGDFATNIAMELTR 60

Query: 56  PLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
            L  +P  IA+ IV  I + +  ++ V +AG GFIN +    +L K++  I+  G  YGR
Sbjct: 61  KLKKNPREIAQNIVDNIDLTNTLIEKVEVAGPGFINFFFKKEWLYKVVDVILSEGDGYGR 120

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             IG G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY+VT+E+Y+NDAG QI
Sbjct: 121 VDIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYKVTKEFYVNDAGNQI 180

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                S+  RY+Q L   + +LPE  Y G  +    KE  ++   +L   P E+    + 
Sbjct: 181 EKFGQSLEIRYRQ-LKGENIELPEDCYHGDDIIERVKEYLNENGDDLEGLPSEERRRKLV 239

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +++++  + ++++ L+   I++D++  E   +  +   + + I++L R G+ YE      
Sbjct: 240 EFALKRNIALMKEHLQKYGIEYDVWFHESSLY--ESGEVYETIEDLKRHGFTYE------ 291

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
                         + F ++ + ++  D  L++++G  TYFAAD+AY + K+E RGFD +
Sbjct: 292 ----------KDGAVWFAASKLDENLKDEVLIRTNGIPTYFAADIAYHRNKFEKRGFDIV 341

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I + G+DH G+V R++A   A+     ++ ++L +LVRL R    ++MSKR G  ITL  
Sbjct: 342 IDIWGADHHGHVPRMKAAMKALGIDPERLVIILMQLVRLVRGKEIVRMSKRTGKAITLID 401

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++E+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +  
Sbjct: 402 LIEEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGILRALSEEG 461

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             L+ D     ++ QE E +  +  L +        IE A    +  ++  YL DLAS+F
Sbjct: 462 IVLNRDKIKLELLQQEEELELLKKLLELP-----EEIEIAARNLDVSRVTKYLLDLASIF 516

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  ++  R       V+  + +L   RL LV  V  +I + L ++GV++P +M
Sbjct: 517 HAFYNACR-------VKNESEELMHTRLSLVECVRIVIKNVLTLLGVDAPEKM 562


>gi|15643850|ref|NP_228899.1| arginyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|7674352|sp|Q9X0H8|SYR_THEMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|4981637|gb|AAD36169.1|AE001768_18 arginyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 546

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 183/579 (31%), Positives = 288/579 (49%), Gaps = 34/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++  + E+  K            +E P     G LSTN AM L++ L  +P  IA+
Sbjct: 2   LVNAIRQKVSEVISK---AYGSEIEFEVEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAQ 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  DP  D + I G GFIN +LS   LR ++ +++    EYGR  +G G KV  E
Sbjct: 59  EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKDEYGRENVGNGMKVQFE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + SANPTGP  VGH R  ++GD L+ +    GY+VTRE YINDAG QI  LA S++ RY 
Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYINDAGKQIRLLAQSLWARYN 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   + ++PEG Y G YL  + ++L ++      +   E+     K  ++  ++  ++
Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNEEVEEFFKQTALNRILSSMK 237

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D L+ +    D++ SE      +   + +++  L  +  VYE                  
Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKNKDVVYE----------------KD 279

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  + +   D+ D+ L++SDG+YTYF  D+AY   KY+RGF  +  + GSDH G++ R
Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+       NV+L + V L R G  ++MS RAG+F+TL  ++DEVG D+ R+  
Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRGGEIVRMSTRAGEFVTLDELLDEVGRDATRYFF 399

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                +  + FD    K +S +NPV+YVQYA+AR  ++F  A+      +          
Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIHNLFSNAEKKGVKFEEGK------H 453

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   +  E  L+ +L  +   ++       P +L  YL  LA  FH  ++         
Sbjct: 454 LELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N +L+  RL L  A   ++  GL +IGV +P  M
Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546


>gi|218283277|ref|ZP_03489332.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989]
 gi|218215967|gb|EEC89505.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989]
          Length = 544

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 199/579 (34%), Positives = 303/579 (52%), Gaps = 38/579 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               LK  ++    K       +  IV+E P++  HG  S+N AM L+R L  +P  IA+
Sbjct: 4   IEVELKQAIQIAVKKAFDLDLDVQNIVVETPKNKDHGDFSSNVAMQLTRQLHQNPRMIAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++    +   V ++ IAG GF+N  LS      ++S ++     YG+     G KV++E
Sbjct: 64  SLLDAFSL-EMVSNIEIAGPGFLNFTLSKDRFSTVISDVLAQKENYGQQ-PSNGIKVDLE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +H+GH R A  GD+ A +M  +GY+VTREYY+NDAG QI  LALS+  RY+
Sbjct: 122 YVSANPTGSLHLGHARGAAWGDSCARIMKKAGYDVTREYYVNDAGNQITNLALSLNARYR 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QA     +++ +  Y G  ++  G ELA +Y    L  P E+ L   +   ++  +  IR
Sbjct: 182 QA-QGIPTEIGQDGYMGKDVEEKGYELAKEYPETYLE-PTEENLKFFRKEGIKFELDKIR 239

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL    +  D++ SE      D   +   I+ L  +GYVYE                  
Sbjct: 240 KDLDRYRVHFDVWSSEQSI--RDAGKVEAAINELNEKGYVYE----------------KD 281

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F +T  GDD DR L K DGS TY   D+AY   K +RGFD ++   G+DH GY+ R
Sbjct: 282 GALWFETTKFGDDKDRVLRKQDGSLTYLVPDIAYHNDKCQRGFDMLVDFFGADHHGYIPR 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L+A   A+     +++V + ++VRL  +G  +KMSKR G+  T+  + D+VG D+ R+  
Sbjct: 342 LKASMTALGNDADKLHVDIIQMVRLVSNGEEMKMSKRLGNATTINELCDKVGVDAARYFF 401

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           + R     LDFD     ++S ENPV+Y QYA+AR  SI +QA+DI     F         
Sbjct: 402 VQRALDSHLDFDIELATKKSNENPVYYAQYAHARMCSIQKQAQDIELATSF--------- 452

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   +  E++L+  L E+ +VI     +++ +K+  Y+ +LAS FH  ++        +
Sbjct: 453 -EDLTNEKEIELMKSLQEFNKVIVETAQSRQVHKMCHYIQNLASKFHSFYN------VCK 505

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V  +N +L+  RL LV A   ++ + L  IGVE+   M
Sbjct: 506 VVDRDNLELSSQRLALVKATQIVLANALECIGVEAVESM 544


>gi|149927068|ref|ZP_01915326.1| arginyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824289|gb|EDM83509.1| arginyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 579

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 191/584 (32%), Positives = 296/584 (50%), Gaps = 63/584 (10%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKG 87
           + +E+P+D +HG ++ N AM L++P   +P  +A+L+   +K +P      D+V IAG G
Sbjct: 29  VTLEKPKDASHGDVACNLAMQLAKPAKRNPRELAQLLADHVKANPACVSLVDAVDIAGPG 88

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+ LS +    +++ ++  G E+G++    G  V IEFVSANPTGP+HVGH R A +G
Sbjct: 89  FINIRLSQNARVAVVAQVLEQGTEFGKSGAHAGETVLIEFVSANPTGPLHVGHGRQAALG 148

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +A++M   G++V +E+Y NDAG QI TLA SV  R  + L   D + PE  Y G Y+ 
Sbjct: 149 DAMAAVMQTQGWKVHKEFYYNDAGVQIQTLATSVQAR-AKGLKPGDVEWPESAYNGDYIA 207

Query: 208 HVG------KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
            +       KE+       +           ++ ++V  +      DLKA  +  D F  
Sbjct: 208 DIAEDFLAGKEVKAADGEPVKGTGNVDDFECIRAFAVAYLRAEQDLDLKAFGVNFDQFYL 267

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E   +      +   +  +   G  +E                +   L  RST  GDD D
Sbjct: 268 ESSLY--SEGKVEAAVALMVASGKTFE----------------EGGALWLRSTDYGDDKD 309

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379
           R + KS+G YTYF  D+AY   K++RGF  +I + G+DH G + R+ A   A  V   + 
Sbjct: 310 RVMRKSEGGYTYFVPDVAYHIQKFKRGFGKVINIQGTDHHGTIARVRAGLQACNVGIPQG 369

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV------------GSDS 421
             + +L ++V + + G  +K+SKRAG ++T+R ++      DE             G D+
Sbjct: 370 YPDYVLHKMVTVMKGGQEVKISKRAGSYVTVRDLICWSGGVDETQPMLSQPEALTKGRDA 429

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VRF ++ RK      FD      QS ENPV+YVQYA+AR  SI  QA+        DL  
Sbjct: 430 VRFFLVSRKADTEFVFDVDLALAQSDENPVYYVQYAHARIHSILDQAE-------VDLST 482

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +          SEL L+  L  YP ++  A     P+ +AFYL +LA  FH  ++  R 
Sbjct: 483 IHGADLTLLAAPSELALLRTLVSYPDILSKAAEELAPHHIAFYLRELAGAFHTFYNAER- 541

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V+ ++  L   R+ L+ AVA+++++GL ++GV +P  M
Sbjct: 542 ------VRIDDMALKTARVGLLVAVATVLSNGLAVLGVSAPKRM 579


>gi|221194653|ref|ZP_03567710.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185557|gb|EEE17947.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 613

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/633 (29%), Positives = 312/633 (49%), Gaps = 70/633 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       ++  L +   +  + +  ++ + +ERP D ++G  ++  AM  +R     P 
Sbjct: 1   MREKIEQLVRKALADAQAQGDLPQFEVEDLGLERPADASNGDWTSTVAMRSARLAHKSPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +VA +   P+++ V IAG GF+N YLS +   +I  +I   G ++G++  GKGTK
Sbjct: 61  DIAAALVAHMSDVPEIERVEIAGPGFVNFYLSTAAGNEIFRTIREQGADFGKSDFGKGTK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +E++SANP GP+HVGH R A +GD+L  +   +GY+V REYYIND G+Q++    S+ 
Sbjct: 121 IQVEYISANPVGPLHVGHGRWAALGDSLCRVFEHAGYDVEREYYINDHGSQMDVFGSSIS 180

Query: 183 WRYQQA-------------------------LYNNDSDLPE--------------GYYPG 203
            RY Q                          + + D   PE                Y G
Sbjct: 181 KRYLQLNEIMAQKNVELQEAYQMLLDDREAFIEDEDDSRPETHPYMDAFNESLGGNAYGG 240

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y+  + K   ++     ++  E+  +   ++   + M++ I+          D++ SE 
Sbjct: 241 DYIIDLAKRFCEENGDAWVSASEDDRMADFRERGYKLMLESIKATCHNARSDFDVWFSER 300

Query: 264 DFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
             +       S +   ++ L   GY+Y                 +   L FRST  GDD 
Sbjct: 301 SLYVPDENGKSAVDRALETLDGMGYLYH----------------EDGALFFRSTKFGDDK 344

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KS+G YTYFA+D+AY   K++R  D++I + G+DH GY++R+++V  A+     Q
Sbjct: 345 DRVLIKSNGEYTYFASDVAYHWNKFQR-VDHVIDIWGADHHGYIQRVDSVCTALGF-PGQ 402

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             VLL + V L R+G P+KMSKR G  I    ++ EV  D+ R+ ++ + +++++DFD  
Sbjct: 403 FEVLLGQFVNLLRNGTPVKMSKRKGTGIPFDELLGEVSVDATRYTLMSKSSNQMIDFDIE 462

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ--------AKDIFPDLDFDLFPRNVIPQESEFD 492
           +VK Q   NPV+YVQYA+AR  SI R+        A+++  D        +        +
Sbjct: 463 QVKRQDSSNPVYYVQYAHARICSILRRGAGVSIEEAQELGMDEVASRAIGDSYDLSLLSE 522

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L   L+E+P ++EN    + P+++  Y+ +LAS FHG ++  +  P        +
Sbjct: 523 NVEQALSRKLSEFPTLVENCARDRAPFRITHYVEELASDFHGFYTVCQVLPSESRPL--D 580

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L+  RL    A   ++   LN+IGV +P  M
Sbjct: 581 EDLSRARLAACDATRRVLALALNLIGVSAPQSM 613


>gi|312792767|ref|YP_004025690.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312179907|gb|ADQ40077.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 561

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 195/592 (32%), Positives = 323/592 (54%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L           ++N +K    K   E   +  I+IE+P++ +HG  +TN AM L+R 
Sbjct: 1   MNLVKLAKQQIQDVVQNAIKNCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60

Query: 57  LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L  +P  IA+ I++ + + +  ++ V +AG GFIN +    +L K++  I+  G +YG+ 
Sbjct: 61  LKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG   KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NIGNSKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   + +LPE  Y G  +    KE  D++  +L N   ++    + D
Sbjct: 181 KFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERREKLVD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ L+   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNISLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ + ++  D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFAASKIDENLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEIVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVSQQTLDNPVFYVQYAHARTCGILRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD       ++ QE E +  +  L +        IE A    +  ++  YL DLAS+FH
Sbjct: 462 VLDKSRIKVELLQQEEELELLKKLLELP-----EEIEIAAKNLDVSRVTKYLLDLASMFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V+  N +L   RL LV  V  +I + L ++GV++P +M
Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVIKNMLRLLGVDAPEKM 561


>gi|303327748|ref|ZP_07358188.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862109|gb|EFL85043.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 551

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 205/576 (35%), Positives = 313/576 (54%), Gaps = 32/576 (5%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  L  I  +  +   +  + VIE PRD  HG LSTNAAM+L++    +P  +A+   A
Sbjct: 7   LRTALAAILEEEGLAWPV--KTVIEPPRDPKHGDLSTNAAMLLAKEAKCNPRELAQKFAA 64

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           R+ +  PD++    AG GF N+  S ++ R+ +  +  +G  YG +  G G KV +E+VS
Sbjct: 65  RLLERCPDLEKAEAAGPGFCNVTFSQAFWRRTVLDVEAAGGAYGASGTGAGRKVLLEYVS 124

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+HVGH R A VGD+LA L+  +GY V  EYYINDAG Q+  L LSV+ R  + L
Sbjct: 125 ANPTGPLHVGHGRGAAVGDSLARLLRKAGYAVDTEYYINDAGRQMRLLGLSVWLRVLE-L 183

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                D PE YY G Y+  + +E+       L + PE +        ++  ++  I+ DL
Sbjct: 184 AGRPVDWPEDYYRGEYIIDIAREMLA-DDPHLPDLPEAEGQECCYQRAMNEILAGIKADL 242

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               ++H  + SE      +   +      L R GY YE                     
Sbjct: 243 NEFRVEHQRWFSEKTLV--ERGAVDAAFTALGRSGYTYE----------------KENAF 284

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
            F +  +GDD DR L KSDGS TYFA D+AY   K+ERG+D +I + G+DH GYV R+ A
Sbjct: 285 WFATEQLGDDKDRVLKKSDGSLTYFATDIAYHHDKFERGYDWLIDIWGADHHGYVPRMRA 344

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              A+   +   +V+L +LV L RDG P+ MS RAG F TL  V+ EVG+D+ RFM L R
Sbjct: 345 AITAMGRPRDSFDVVLIQLVNLLRDGKPVSMSTRAGTFETLADVLREVGADAARFMFLSR 404

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           K+   LDFD    K++S +NPV+YVQYA+AR  ++ R+A +    L   +    +   ++
Sbjct: 405 KSDSPLDFDLELAKQRSLDNPVYYVQYAHARICAVLRRAGERGVGLPETVTEEMLAGLDT 464

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                ++ L+   A +  ++  A  A   + ++ YL +LA + H +++  +       + 
Sbjct: 465 ---PEDMALLRKAAAFQDMLAAAARALAAHHVSHYLTELAGLLHSYYARHQ------VLL 515

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+++  T+ RL L+ AVA ++ +GL+++GV +P  M
Sbjct: 516 ADDQPRTLARLALLRAVAQVLRNGLDVLGVSAPEAM 551


>gi|319441082|ref|ZP_07990238.1| arginyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 558

 Score =  528 bits (1360), Expect = e-147,   Method: Composition-based stats.
 Identities = 184/583 (31%), Positives = 291/583 (49%), Gaps = 30/583 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD S  +    + +     ++  I  D+ V+ERPR+  HG  +TN A+  ++  G +P  
Sbjct: 4   ADLSVLISGAARTVLTDHGLDPAIVPDQPVVERPRNPEHGDYATNIALQTAKKAGTNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   +   +     VD   +AG GFIN+ L+     ++++ I+ +G  YG      G ++
Sbjct: 64  LGTWLAEALAAADGVDEATVAGPGFINIRLAADAQGRLVTDILTAGDAYGTGDDYTGQRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++A  G +VTREYY ND G QI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLAARGAQVTREYYFNDHGTQIDRFARSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  ++  + + +  +  + +   I +   V  M  
Sbjct: 184 AAK------GEPAPEDGYGGDYIADITDQVI-EATPDWADHSDGEIQEIFRSQGVDLMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L     + D+F  E+     +   +   I  L   G +YE               
Sbjct: 237 HIKRTLAEFGTEFDVFFHENALF--ESGAVEKAIQTLKDNGNLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RS+  GDD DR ++KSDG+  Y A D+AY   K +RG D  IY++G+DH GY
Sbjct: 281 --EGAWWLRSSNFGDDKDRVVIKSDGNAAYIAGDIAYIADKIDRGHDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V RL+A AAA+     Q+ VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 VARLKAAAAALGYNPEQVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D      Q+ +NPVFYVQY +AR  S+ R+A++    L  DL   +
Sbjct: 399 YALIRSSVDSSLDIDMDLWTSQTSDNPVFYVQYGHARLCSLGRKAEENGISLPEDL---S 455

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +   +     E  LI  L E+P V+  A   +EP+++A Y   LA  FH  +   +  P
Sbjct: 456 TLDLGTLTHDREGDLIRTLGEFPDVLATAAELREPHRVARYAEHLAGTFHRFYDSCQILP 515

Query: 544 RLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +   + + RL L +A    + + L ++GV +P  M
Sbjct: 516 KGDDATGEDIAPVFLARLALANAARVTLANALRMVGVSAPERM 558


>gi|221199858|ref|ZP_03572901.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221207473|ref|ZP_03580482.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221172676|gb|EEE05114.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180097|gb|EEE12501.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 598

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 201/616 (32%), Positives = 308/616 (50%), Gaps = 62/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V+S  IAG GFINL LS +  + ++ +++  G  +G +   
Sbjct: 72  QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLEQGRAFGTSDRE 131

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAGAQI  LA
Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGAQIGNLA 191

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    +   L  
Sbjct: 192 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  +   + +L                  L+  LAEYP ++
Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY---NGELAQLPQADLSQLTSPQAASLMQKLAEYPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 583 LENGLAMLGVSAPAKM 598


>gi|312621722|ref|YP_004023335.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202189|gb|ADQ45516.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 561

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 201/592 (33%), Positives = 322/592 (54%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L           ++N +K    K   E   +  I+IE+P++ +HG  +TN AM L+R 
Sbjct: 1   MNLVKLAKQQIQDVVQNAIKNCIDKGVFELDSIPGIMIEKPKEKSHGDFATNIAMELTRK 60

Query: 57  LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L  +P  IA  IV+ I + +  ++ V +AG GFIN +    +L K++  I+  G +YG+ 
Sbjct: 61  LKKNPREIANGIVSAIDLSNTFIEKVEVAGPGFINFFFRKDWLYKVVDVILTEGDDYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   + DLPE  Y G  +    KE  D++  +L N   ++    + D
Sbjct: 181 KFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ L+   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ + +   D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFAASKIDESLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD       ++ QE E +     L +        IE A    +  ++  YL DLAS+FH
Sbjct: 462 VLDKSRIKVELLQQEEELELLRKLLELP-----EEIEIAARNLDVSRVTKYLLDLASMFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V+  N +L   RL LV  V  +IN+ L ++GVE+P +M
Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVEAPEKM 561


>gi|170289501|ref|YP_001739739.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688807|sp|B1L826|SYR_THESQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170177004|gb|ACB10056.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 546

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 184/579 (31%), Positives = 288/579 (49%), Gaps = 34/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++  + E+  K            +E P     G LSTN AM L++ L  +P  IA+
Sbjct: 2   LVNAIRQKVSEVISK---AYGSEIEFEVEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAK 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  DP  D + I G GFIN +LS   LR ++ +++    EYGR  +G G KV  E
Sbjct: 59  EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKDEYGRENVGNGMKVQFE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + SANPTGP  VGH R  ++GD L+ +    GY+VTRE YINDAG QI  LA S++ RY 
Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYINDAGKQIRLLAQSLWARYN 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   + ++PEG Y G YL  + ++L ++      +   E+     K  ++  M+  ++
Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNEEVEEFFKQTALNRMLSSMK 237

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D L+ +    D++ SE      +   + +++  L  +  VYE                  
Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKNKDVVYE----------------KD 279

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  + +   D+ D+ L++SDG+YTYF  D+AY   KY+RGF  +  + GSDH G++ R
Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+       NV+L + V L R G  ++MS RAG+F+TL  ++DEVG D+ R+  
Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRGGEIVRMSTRAGEFVTLDELLDEVGRDATRYFF 399

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                +  + FD    K +S +NPV+YVQYA+AR  ++F  A+      +          
Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIHNLFSNAEKKGVKFEEGK------H 453

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   +  E  L+ +L  +   ++       P +L  YL  LA  FH  ++         
Sbjct: 454 LELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N +L+  RL L  A   ++  GL +IGV +P  M
Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546


>gi|293602808|ref|ZP_06685248.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818824|gb|EFF77865.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 561

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 190/590 (32%), Positives = 303/590 (51%), Gaps = 50/590 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +L + ++    +   + +    +++ERP+  AHG ++TN AM L++P   +P  +A+ IV
Sbjct: 8   QLISLIQAAVAQSLPDAQ--ANVLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIV 65

Query: 70  ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   P     VDS  IAG GFINL ++ +  + +++++   G  YGR     G K+ +
Sbjct: 66  DALMAAPGARDLVDSAEIAGPGFINLRITAAARQAVIAAVAEQGASYGR-APRSGEKILV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A +GD L  L    G++VTRE+Y NDAG QI+ LA+SV  R 
Sbjct: 125 EFVSANPTGPLHVGHARQAALGDALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQARA 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVKDYSVQ 239
           +  L     D P   Y G Y+  + ++  D           +        L  ++ ++V 
Sbjct: 185 R-GLTTESPDWPADGYKGDYIADIARDFQDGKTIQPSDGEPVTATGNIDNLDDIRVFAVA 243

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +    DL+A  +  D +  E   +      +   ++ L   G+ YE           
Sbjct: 244 YLRREQDLDLQAFGLAFDNYYLESSLYT--SGRVEATVNALIAGGHTYE----------- 290

Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF   + + G
Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQG 345

Query: 358 SDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G V R+ A   A+ E   K   + +L ++V++ R G  +K+SKRAG ++T+R ++D
Sbjct: 346 SDHHGTVARVRAGLQALGEGIPKDYPSYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLID 405

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  ++   A    P  
Sbjct: 406 WVGRDAVRYFLIQRRADTEFVFDVDLALSKSDENPVYYIQYAHARISTMINNAG--MPAA 463

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D      +++        SE  L+  LAE+P V+  A     P+ +AF+L D AS FH  
Sbjct: 464 DVAAADTSLLTA-----PSEFALMQRLAEFPNVVALAAQDLSPHHIAFWLRDCASDFHAW 518

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       V  ++  L + RL+L      ++ +GL ++GV +P  M
Sbjct: 519 YAAER-------VLVDDVALKLARLRLAATTRQVLANGLELMGVSAPERM 561


>gi|320527004|ref|ZP_08028193.1| arginyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132589|gb|EFW25130.1| arginyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 557

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 191/583 (32%), Positives = 295/583 (50%), Gaps = 33/583 (5%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            +DF S++ + ++E   ++         +++E PRD   G  ST+ AM LSR L   PL 
Sbjct: 7   MSDFESKISSAVREAVKQVYDIDADDSILIVETPRDPKMGDYSTSVAMRLSRTLHKSPLD 66

Query: 64  IAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IA  IV ++K    +  S+     GFIN  L    L +++++++ +G +YG+N  G G  
Sbjct: 67  IAGPIVEKLKEIYTEASSIEAVKPGFINFRLKKDALAEVINTVINAGDDYGKNNTGAGVN 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+VSANPTG +H GH R A  GD ++ L   SGY   RE+Y+NDAG QI  L  S+ 
Sbjct: 127 VLVEWVSANPTGDLHCGHARNAAWGDCISRLYEASGYNNYREFYVNDAGNQIVMLGESLI 186

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY    +     LPE  Y    +  +  ++A+K   + LN    + L   K   V+  +
Sbjct: 187 SRYFDH-FGKKYPLPEDGYHAQDIIDIANQIAEKDGDKWLNADSAERLEYFKKTGVELEL 245

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K I DDLK        F  E  F+  +   I D +  +A  G  YE              
Sbjct: 246 KKIEDDLKIYRCDFQNFQHETFFYENNRKRINDCLTKMADMGLTYE-------------- 291

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 L F+ST  GDD DR L KSDG+ +Y   D+A    K ERG+D++I + G+DH  
Sbjct: 292 --KDGALWFKSTEYGDDKDRVLRKSDGTLSYLTPDIANHIYKIERGYDHLINLWGADHHS 349

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV R+++   A+      + V + ++VR+  DG  +KMSKR G+ IT+R + ++VG D+ 
Sbjct: 350 YVTRMQSALTALGYPDV-LKVDIIQMVRMVEDGKEVKMSKRTGNAITIRELCEDVGVDAA 408

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+  + +  +  +DFD    + +   NPVFY QYAY+R  SI    K             
Sbjct: 409 RWFFVSKDVATHMDFDMKLARSKDNNNPVFYAQYAYSRMHSIMNNPKIPAF--------T 460

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            V   +   D  ELQL+  ++E+P  + NA  +++P K+  Y+  L  ++H +++  R N
Sbjct: 461 QVDTYDRLSDEKELQLMKLISEFPIEVANAAASRKPNKITEYIISLVKIYHSYYNSSRVN 520

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + +LT  RL LV A    + + LN++GVE+P  M
Sbjct: 521 ------NPEDPELTNQRLGLVKATMITLKNALNLVGVEAPESM 557


>gi|121592776|ref|YP_984672.1| arginyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120604856|gb|ABM40596.1| arginyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 577

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 182/597 (30%), Positives = 293/597 (49%), Gaps = 51/597 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   L +   K+        R   E P+  AHG L+  AAM L++PL  +P  + E
Sbjct: 14  VKQELLAALADELEKVSPGAG--SRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGE 71

Query: 67  LIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            + A ++  P        + IAG GF+N+ L P+  ++++  ++  G +YG     +G K
Sbjct: 72  QLQAALEATPAFQKWVQAIEIAGPGFLNIRLKPAAKQQVVHEVLAQGAQYGYQPA-RGEK 130

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A +GD ++ L A  G+ V RE+Y NDAG QI+TL  S  
Sbjct: 131 VLVEFVSANPTGPLHVGHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQ 190

Query: 183 WRYQQALYNND-------SDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWL 230
            R +     +D       + L + +Y G Y++ +      K              + +  
Sbjct: 191 LRAKGFKPGDDCWPTDADNPLAKNFYNGDYIQDIADAFLAKATVQADDRAFTANGDVEDY 250

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++ ++V  +      DL+A N+Q D +  E   +      +   +  L   G  YE  
Sbjct: 251 ENIRQFAVAYLRNEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-- 306

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             L  +ST  GDD DR + K DG+YTYF  D+AY   K++RGF 
Sbjct: 307 --------------QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFT 352

Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            ++ + G+DH G + R+ A   A  V   +   + +L  +VR+ R+G  +K+SKRAG ++
Sbjct: 353 KVVNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYV 412

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR +++    D+VRF +L RK      FD      Q+ +NPV+YVQYA+AR  S+ R  
Sbjct: 413 TLRDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGW 472

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           ++     D+D+     +            L++ LA+YP ++  A     P+ + FYL DL
Sbjct: 473 RE-----DYDVAALRDVDLSPLEGPQAQALMLLLAKYPEMLTAAAAGNAPHDVTFYLRDL 527

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ +H ++   R       +  ++  +   RL LV A A ++++GL ++GV +P  M
Sbjct: 528 AAAYHSYYDAER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 577


>gi|281413077|ref|YP_003347156.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374180|gb|ADA67742.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 546

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 185/579 (31%), Positives = 291/579 (50%), Gaps = 34/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++  + E+  K    +       +E P     G LSTN AM L++ L  +P  IA+
Sbjct: 2   LVNAIRQKVSEVISKAYGSE---IEFEVEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAK 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  DP  D + I G GFIN +LS   LR ++ +++    EYGR  +G G KV  E
Sbjct: 59  EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKDEYGRENVGNGMKVQFE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + SANPTGP  VGH R  ++GD L+ +    GY+VTRE YINDAG QI  LA S++ RY 
Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYINDAGKQIRLLAQSLWARYN 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   + ++PEG Y G YL  + ++L ++      +   E+     K  ++  ++  ++
Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNEEVEEFFKQTALNRILSSMK 237

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D L+ +    D++ SE      +   + +++  L  +  VYE                  
Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKDRNVVYE----------------KD 279

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  + +   D+ D+ L++SDG+YTYF  D+AY   KY+RGF  +  + GSDH G++ R
Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+       NV+L + V L RD   ++MS RAG+F+TL  ++DEVG D+VR+  
Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRDDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFF 399

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                +  + FD    K +S +NPV+YVQYA+AR  ++F  A+      +          
Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIYNLFSNAEKKGVKFEEGK------H 453

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   +  E  L+ +L  +  V++       P +L  YL  LA  FH  ++         
Sbjct: 454 LELLGNEEERVLMRNLGMFNTVLKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N +L+  RL L  A   ++  GL +IGV +P  M
Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546


>gi|329121651|ref|ZP_08250271.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468511|gb|EGF13991.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 554

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 194/586 (33%), Positives = 302/586 (51%), Gaps = 33/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +    ++          ++ K     +  +E       G  S+NAAM  +R   +
Sbjct: 1   MEVRDELKELIEKAKLAAVESGELPKGDYPPVQRLELSPKKEFGDYSSNAAMQWARVAHM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE++V  I     V    IAG GFIN +L+   +   L  I+  G  YG      
Sbjct: 61  APRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKDTVYAELKKILAKGENYGDLPRND 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V +E+VSANPTGP+H+GH R A  G  + +L+  +GY+V  EYYINDAG QI+ LAL
Sbjct: 120 EEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVLSEYYINDAGNQIDNLAL 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY Q L   D+ LPE  Y G  +    + + D+  ++ L   EEK + + K+ +++
Sbjct: 180 SVNARYLQLL-GKDAQLPENGYHGHDIIETAQSILDRDGTKYLEMDEEKRIEVFKEVALK 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  ++ DL   N++ D+++SE  F+   P  + +++D L + G +YE           
Sbjct: 239 EKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKKNGTLYE----------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                        +T  GDD DR +++S+G  TYF +D+AY K K ERG+  +I + G+D
Sbjct: 285 -----KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVKNKIERGYHKLIDIWGAD 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R+++   ++       +++L ++V L RDG P+KMSKR G  +TLR ++DEVG 
Sbjct: 340 HHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSKRTGQSVTLRELMDEVGV 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  R+    R     +DFD    K++S ENPV+Y+QYA AR  S+F+QAK+    +    
Sbjct: 400 DVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVHSLFKQAKENGVKIP--- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      D SEL LI  +  Y   ++ A   + P ++A Y Y+LA++FH  +   
Sbjct: 457 -SWEDVDFTVLVDESELDLIKKMEVYHGFLKGAAAERAPQRIATYAYELAALFHHFYRKC 515

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       +     KL   RL L+ AV  ++   L I+GV +P EM
Sbjct: 516 R-------ILGEEEKLMQARLGLIRAVGYVLVHALGILGVSAPEEM 554


>gi|296128906|ref|YP_003636156.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020721|gb|ADG73957.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 560

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 197/591 (33%), Positives = 305/591 (51%), Gaps = 46/591 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
             +  L+  L +             + +R+ IERPR   HG  +TN A+ L++  G +P 
Sbjct: 5   QLADALRVALVQAVDDGTFALDPAALPERVHIERPRQREHGDWATNVALQLAKKAGSNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             AE +  R+   P V +V +AG GF+N+ L  +   ++   IV  G  YGRN    G K
Sbjct: 65  AFAEELARRLADVPGVAAVDVAGPGFLNIRLDAAAAGELARGIVEQGAGYGRNATFAGLK 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+G  R A VGD LA ++  SG EVTREYY ND GAQI+  A S+ 
Sbjct: 125 VNLEFVSANPTGPLHIGGVRWAAVGDALARVLQASGAEVTREYYFNDHGAQIDRFARSLV 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238
            R +        + PE  Y G Y+  +   +          +    P+ +     +   V
Sbjct: 185 ARAR------GEEAPEDGYGGQYIADIADRVIADAQAAGEPDPRTLPDAEATEAFRARGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I+  L    +  D++  ED  H  +   +   ++ L   G+++E          
Sbjct: 239 ELMFAEIKTSLHDFGVDFDVYFHEDSLH--ESGAVERAVERLRASGHMFEA--------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR ++KSDG   Y A D+AY+  K ERGFD ++ ++GS
Sbjct: 288 -------DGALWLRTTAFGDDKDRVVVKSDGQAAYIAGDIAYYLDKRERGFDRVVIMLGS 340

Query: 359 DHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GYV R+ AV AA  ++    + +L+ +LV L +DG P++MSKRAG  IT+  +V+ V
Sbjct: 341 DHHGYVGRMMAVCAAFGDEPHVNLELLIGQLVNLVKDGEPVRMSKRAGTIITIDDLVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ +    + + +D D   + + + ENPVFYVQYA+AR  ++ R A +     + 
Sbjct: 401 GVDAARYALSRSSSDQQIDLDLDLLAKATNENPVFYVQYAHARTAAMARNAAEAGVRRE- 459

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D F  +++  E     SE +L+  LA++PRV+  A   +EP+++A Y  D+A  +H  + 
Sbjct: 460 DGFDASLLDHE-----SEAKLLGLLADFPRVVAQAADLREPHRVARYAEDVAGAYHKWYD 514

Query: 538 HGRENPRLRFVQANNRKLTMM---RLQLVHAVASIINSGLNIIGVESPNEM 585
             R     R V   + +LT     RL L  A   ++ + L+++GV +P  M
Sbjct: 515 QKR-----RVVPWGDEELTDAHRTRLWLNDATRQVLANALDLLGVSAPERM 560


>gi|88607168|ref|YP_505281.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|109894971|sp|Q2GK20|SYR_ANAPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88598231|gb|ABD43701.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 580

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 231/583 (39%), Positives = 350/583 (60%), Gaps = 13/583 (2%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F + ++  ++ +     + + +  RI++  P    HG L TNAA+IL +    +P+
Sbjct: 10  IFGFFRNAIEERIRAVWSGDNIPESLFKRIIVGPPAQPKHGDLYTNAALILGKFDKKNPM 69

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  +    +    ++S+ +   GFIN +   S    ++ +I   G EYGR  +G   K
Sbjct: 70  ELASTLCNAFENIEGIESINVVAPGFINFHCVNSVWHGVVRNINKLGREYGRTDLGHNKK 129

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VNIEFVSANPTGP+H+GH R AV GD L++L+ + GY+V +EYY+NDAG+Q+ TL  SVF
Sbjct: 130 VNIEFVSANPTGPLHIGHARGAVFGDVLSNLLKWVGYDVIKEYYVNDAGSQVKTLVSSVF 189

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY++AL   +  +  G YPG YLK + ++L +KY S+LLN  ++    I++ +++ +M+
Sbjct: 190 LRYKEAL-GEEITIGAGLYPGEYLKPIARDLVEKYGSDLLNASDKD--EIIRSFTLSSML 246

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +I++DL  L ++HD+F+SE D    +   I + +  L  +G +YEG+L  PK +     
Sbjct: 247 NLIKEDLALLGVEHDVFVSESDLQNRNV--IEECVKYLRERGIIYEGVLEKPKREDELSE 304

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
              R Q+LF+ST  GDD DR L K DG+++YFA D+ Y   K  RGFD+MI  +G DH G
Sbjct: 305 WQPRVQMLFKSTEFGDDSDRALQKEDGTWSYFAGDIGYHFHKISRGFDSMIMTLGFDHKG 364

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV RL+A  AA+S  KA I++ L  LV    +G P+KMSKR G+F+T+R V+DEVG D  
Sbjct: 365 YVSRLKAAVAALSNGKASIDIKLYNLVNFLENGTPVKMSKRKGEFLTVRDVIDEVGRDVA 424

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RFMML R+N  +LDFDF K +E+SK++ +FY+QYA+AR RSI R+  +        L   
Sbjct: 425 RFMMLTRRNDVVLDFDFAKAREESKDSQIFYIQYAHARIRSIVRRCPE--------LLAI 476

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             I         EL L+  L+ +P VI+ +    EP+ +AFYL ++A  FH  W  G  +
Sbjct: 477 EKIDFSCVITEQELSLLRLLSRWPSVIKTSAENYEPHTIAFYLIEVAEAFHALWGCGNSD 536

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P +RF+   +   T  R+ +  AV+ +I SGL+I  +    EM
Sbjct: 537 PSMRFIVEGDLHTTSARIYIAIAVSHVIASGLDIFSITPSEEM 579


>gi|295394643|ref|ZP_06804862.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972536|gb|EFG48392.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 546

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 196/581 (33%), Positives = 315/581 (54%), Gaps = 40/581 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++  +   +       ++  ++V+ERP++  HG  +TN A+  ++  GL P  +A
Sbjct: 5   ELKLAIEQAISAYNETHGTNVEVPAKLVVERPKNRDHGDWATNVALQTAKKTGLQPRELA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   +     ++   +AG GF+N+ L+     K+ + IV +G EYGR    K + +N+
Sbjct: 65  TGLAQILSDVDGIEKAEVAGPGFLNITLAAGAAGKLAADIVSAGREYGRGESLKDSTINL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GD +  ++  +G  VT EYYINDAG+Q++T A SV  R 
Sbjct: 125 EFVSANPTGPLHIGHTRWAALGDAIGRVLKAAGATVTTEYYINDAGSQMDTFANSVLARM 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +        D+PEG YPG Y+  + +EL  ++  E  +  +E     VKD + +A +K I
Sbjct: 185 RGK------DVPEGGYPGQYIADIARELLSRH-PEWNDAKDEDIFEQVKDEAYKAQLKDI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            D L++  +  D + SE   H  D   I + ++ L  QG+V+E                 
Sbjct: 238 SDTLESFGVHFDTWFSERTLH--DTGAIAEAVERLREQGHVFEN---------------- 279

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  R+T  GDD DR L++SDG  TYFAAD AY+  K +RGF+  IY++G+DH GYV 
Sbjct: 280 EGAIWLRTTDFGDDKDRVLVRSDGVPTYFAADAAYYLNKRDRGFEEKIYLLGADHHGYVG 339

Query: 366 RLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           RL+A+AA   +   + I +L+ +L+ +       ++SKRAG+ I LR +V+ +GSD+VR+
Sbjct: 340 RLKALAATAGDDPNRNIEILIGQLISV----NGARLSKRAGNIIELRDLVEWLGSDAVRY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +        L  D   +K  S +NPV+YVQYA+AR +S+ R+A       D        
Sbjct: 396 SLARTPADSPLALDPEVLKSASNDNPVYYVQYAHARAKSVERKATSAGVSTD-------S 448

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
               +  D +E  L+  LA+YPRV+  +   +EP+++A YL  LA +FH  +   R  P 
Sbjct: 449 FDPATLQDPTEAALLSALADYPRVVAQSAQLREPHRVARYLESLAGLFHKWYDACRVTP- 507

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     +   RL L  A A+++++GL+++GV +P  M
Sbjct: 508 --LGDDPVEPVHSSRLMLDMATATVLSNGLDLMGVSAPERM 546


>gi|148270771|ref|YP_001245231.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166200584|sp|A5IN82|SYR_THEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147736315|gb|ABQ47655.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 546

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/579 (32%), Positives = 293/579 (50%), Gaps = 34/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++  + E+  K+   +       IE P     G LSTNAAM L++ L  +P  IA+
Sbjct: 2   LVNTIRQKVSEVISKVYDSE---IEFEIEIPPKKEFGDLSTNAAMKLAKTLKKNPREIAQ 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  DP  D + I G GFIN +LS   LR ++ +++    EYGR   G G K+  E
Sbjct: 59  EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLERKDEYGRENTGNGVKIQFE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + SANPTGP  VGH R  ++GD L+ +    GY+VTRE YINDAG QI  LA S++ RY 
Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVFKELGYDVTREMYINDAGKQIKLLAQSLWARYN 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   + ++PEG Y G YL  + ++L  +   +  +   E+   + K  ++  ++  ++
Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVSEIGDKYKDLWNEEVEELFKQTALNRILSSMK 237

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D L+ +    D++ SE      +   + +++  L  +  VYE                  
Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKDRDVVYE----------------KD 279

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  + +   D+ D+ L++SDG+YTYF  D+AY   KY+RGF  +  + GSDH G++ R
Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+       NV+L + V L RD   ++MS RAG+F+TL  ++DEVG D+VR+  
Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRDDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFF 399

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                +  + FD    K +S +NPV+YVQYA+AR  ++F  A+      +          
Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIYNLFSNAEKKGVKFEEGK------H 453

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   +  E  L+ +L  +  V++       P +L  YL  LA  FH  ++         
Sbjct: 454 LELLGNEEERVLMRNLGMFNTVLKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N +L+  RL L  A   ++  GL +IGV +P  M
Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546


>gi|289432951|ref|YP_003462824.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946671|gb|ADC74368.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 556

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 197/589 (33%), Positives = 317/589 (53%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57
           M       + +   L +   K + E +I      I IE P+   +G  +T+  + L++  
Sbjct: 1   MNSILAIKNIIIESLSQAMEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           G  P+ +A+++ + I+    +  V +A  GFIN   S  +L  ++ +I+     YG   +
Sbjct: 61  GKRPMELAQILASYIETGSGISKVSVAPPGFINFTFSKEWLCSLVKTILTEAGSYGNINM 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G++V IEFVSANPTGP+H+GH R AV+G TL++++  +GY V  E+YINDAG+QI+  
Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNILKAAGYYVEEEFYINDAGSQIDAF 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++F RYQQAL   D+ +P+  Y G Y+  +  E+  KY  + L  P +     + +  
Sbjct: 181 KRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAAEMVTKYGDKYLQMPADIAQNDLGEIG 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  M+ +I DDLKAL +  DI+ SE   + G     +  +D L+   Y+ E         
Sbjct: 240 MTRMLCLISDDLKALKVDFDIWFSERSLYSG--GQYKTAMDILSGNNYIAE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
                        F ST++GD  D  +++SDG+ TYFA+D+AY   K+ ER FD +I + 
Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH G+V R++A+ +A+     ++  LL +++ L R G  +++SKR G+ I+LR V++E
Sbjct: 342 GADHQGHVSRMKAMVSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEIISLREVIEE 401

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG+D+ RF  L R     +DFD    K++S ENPV+YVQYA+AR  SI   A++   D  
Sbjct: 402 VGADACRFFFLARSTESQMDFDLELAKKESAENPVYYVQYAHARICSILHLAEENQLDYS 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                      E E        I  +AE P ++E  +   EP+ L +Y  +LA+ FH  +
Sbjct: 462 TGDTDLLGEEAELEL-------IRKMAELPEIVETVSRTLEPHHLTYYAQELANAFHQFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R       V ++N +LT  RL+LV A   ++   L+++G+ SP  M
Sbjct: 515 KDCR-------VISDNAELTCARLKLVDASRIVLARTLHLMGMTSPESM 556


>gi|184200608|ref|YP_001854815.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|238689220|sp|B2GLW8|SYR_KOCRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|183580838|dbj|BAG29309.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 556

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 185/583 (31%), Positives = 292/583 (50%), Gaps = 34/583 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + SS +   L++     ++   +   L    +ERP++  HG  +T  AM +++ +G  P 
Sbjct: 5   ELSSAVSACLQDAVAAGELTVVDGVDLPEAKVERPKNRDHGDWATTVAMQVAKKVGRSPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A+++  R+   P V +V IAG GF+N+ L  +    +  S+V  G  +G      GT 
Sbjct: 65  DVAQILSERLARVPGVKTVDIAGPGFLNITLDAAAAGGLAQSVVEQGSAFGTGDALAGTT 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+EFVSANPTGP+H+G  R A VGD+LA ++   G EV REYY ND G QI+  A S+ 
Sbjct: 125 INLEFVSANPTGPIHLGGTRWAAVGDSLARVLQAQGAEVVREYYFNDHGNQIDRFARSLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R +          PE  Y G Y+  V +E+   +   L +   ++   + +   V+ M 
Sbjct: 185 ARAR------GEAAPEDGYGGQYISDVAQEVLALHPDALESEDPQE---VFRAAGVELMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L    +  D+F  E+     +   +  +++ L     +Y               
Sbjct: 236 AQIKSSLHEFGVDFDVFFHENSLF--EDGQVEKLLEQLRSSDSLYFA------------- 280

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                    RST  GDD DR ++KSDG+  Y A D+AYFK K +RG D  IY++G+DH G
Sbjct: 281 ---DGAWWLRSTEHGDDKDRVVIKSDGNAAYIAGDIAYFKNKRDRGADLCIYMLGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV RL+A AAA+ +    + VL+ ++V L RDG  ++MSKRAG  +T+  +V+ VG D+ 
Sbjct: 338 YVARLKAAAAALGDSPDAVEVLIGQMVNLVRDGEAVRMSKRAGTVVTMEDLVEVVGVDAA 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +        +D D   +  +S ENPVFYVQYA+AR  ++ R A+        D    
Sbjct: 398 RYSLTRYSVDSNIDIDLDVLTRRSNENPVFYVQYAHARTCAVARNAEAAGVRRT-DDAGA 456

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                       E  L+  L +YP V+  A   +EP+++A +L  LA  +H  +   R  
Sbjct: 457 PQFDAALLSHPREADLLAALGQYPSVVAQAADFREPHRVARHLEALAGAYHRWYDACRVT 516

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P+          +   RL L  AV  ++ +GL+++GV +P  M
Sbjct: 517 PQG---DGEVELVHHTRLWLNDAVRQVLANGLDLLGVSAPERM 556


>gi|258543874|ref|ZP_05704108.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520880|gb|EEV89739.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 592

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 203/620 (32%), Positives = 311/620 (50%), Gaps = 65/620 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +  +  S L   L  +    K+E+  L   + + R ++ AHG  S+N AM  ++   ++P
Sbjct: 1   MKTEILSGLTTALHAVARAQKIEEGQLTLPLELGRCKNPAHGDYSSNVAMQYAKTFQMNP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              AE ++A +   P + +V IAG GFIN+ L+      +L +IV  G  YGR+      
Sbjct: 61  RQFAEALIAALPAHPGIAAVEIAGPGFINIRLASGSDSAVLETIVREGAAYGRHQAEHPQ 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ +EFVSANPTGP+HVGH R A  G TLA+++  +G+ V  EYY+NDAG Q++ LALSV
Sbjct: 121 KILLEFVSANPTGPLHVGHGRGAAYGATLANILRANGHHVDNEYYVNDAGRQMDILALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--------------- 226
           +WRY Q +  +D  LP+G Y G Y+  + +E   +Y  +    PE               
Sbjct: 181 YWRYMQ-ICGSDRTLPQGIYQGDYVVDIAREHYARYGDKHYRAPETWVPAHPAEWSEAAI 239

Query: 227 ---------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                                E     V D  + A +  IRDDL+   +  D + SE   
Sbjct: 240 DNGERDAWIDAAIAALKNTLGEADYRAVFDAGLDAEVADIRDDLQEFGVTFDRWYSERAL 299

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                  I +++  L  +GY+YE                      FR++  GD+ DR + 
Sbjct: 300 FT--DGRIAEMLGVLRARGYLYE----------------KDGAQWFRASDFGDEKDRVVT 341

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           + +G  TYFA+D+AY   KY+RG+D MI + G+DH GY+ R+ A  AA+     ++++ L
Sbjct: 342 RENGITTYFASDIAYHYDKYQRGYDRMIDIFGADHHGYMARVRASLAALGLAPEKLDITL 401

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +   LY+DG  ++MS R+G F+TLR +  +VGSD+ RF  + RK  + LDFD       
Sbjct: 402 VQFAVLYKDGAKMQMSTRSGQFVTLRDLRAQVGSDAARFFYVMRKPEQHLDFDLDLATSH 461

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           SK+NP +YVQYA+AR   +  +A++     D       +  +E   +  E  L+  LA Y
Sbjct: 462 SKDNPYYYVQYAHARTSRVLERAQEEGVPFD---TQTALAQREHLTEPEEKTLLRELARY 518

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  I  A      + +  YL DLA  +H ++  G +      V  ++  L   RL L HA
Sbjct: 519 PDTIAAAGAQMAGHLIVNYLKDLAGAWHQYYDAGHK------VLHDDAALRDARLLLTHA 572

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  ++ +GL+IIGV +   M
Sbjct: 573 VRQVLRNGLDIIGVAARERM 592


>gi|167039271|ref|YP_001662256.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913911|ref|ZP_07131228.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725404|ref|YP_003905155.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166853511|gb|ABY91920.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890596|gb|EFK85741.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582465|gb|ADN55864.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 562

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 198/591 (33%), Positives = 323/591 (54%), Gaps = 38/591 (6%)

Query: 2   YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            +       +K+     ++    +  +  +++  I IE P++  HG L+ N AM++++  
Sbjct: 3   NIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62

Query: 58  GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE+IV+++   +  ++ + IAG GFIN +L   +L + L  +   G +YGR  
Sbjct: 63  KMPPKKIAEIIVSKVDPSNTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           IG G KV +EFVSANPTGPMH+G+ R   +GD LA+++ ++GY+VTRE+YINDAG QI  
Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAGYDVTREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY Q L    +++PEG Y G  +    +E  + Y  +  + P E     + DY
Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALIDY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++  ++ I++DL    I++D++ SE   +  D   +  +I+ L ++GY YE        
Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       L F+ T+ G + D  L++++G  TY A+D+AY K K+  RGFD +I V
Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDIAYHKNKFITRGFDWVINV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V  ++    A+     +++V+L +LV+L   G  +KMSKR G  +TLR ++D
Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG D+ RF    R     +DFD    KEQS ENPVFYVQYA+AR  SI RQ ++    +
Sbjct: 404 EVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463

Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           D  D    +++ +E E +  +       A +P  I  A     P+++  Y+ D+AS+FH 
Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  R       V+     L   R  L+ AV ++I + L+I+ + +P +M
Sbjct: 519 FYNSHR-------VKGVEEDLMKARYVLILAVKTVIKNVLDILKITAPEKM 562


>gi|332977286|gb|EGK14077.1| arginine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 609

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/627 (29%), Positives = 303/627 (48%), Gaps = 70/627 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            +  + L +  K +  +  +     +   I R +   HG  ++N A+  ++    +P  +
Sbjct: 7   DEIFALLDSAAKVLIDQDILPNGWQNNSQITRSKSPEHGDYASNIALTAAKAAKSNPRAL 66

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE ++A +  +  +  + +AG GFIN++L+      +L +I  +   YG        K+ 
Sbjct: 67  AEQLIAALPDNDSIAKLEVAGPGFINIFLNTGAKFAVLDAIFDNNERYGLTDEFSDKKIQ 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPT  +HVGH R A  G ++A+L+   GY+VTREYY+NDAG Q++ LA S + R
Sbjct: 127 VEFVSANPTSSLHVGHGRGAAFGMSVANLLEAVGYKVTREYYVNDAGRQMDILAASTYLR 186

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------YSSELLNFPEEKWLPIVKD- 235
           Y + L       P G Y G Y+  + + +  +        Y+    N PE+       D 
Sbjct: 187 YLE-LNGEQVHFPVGGYQGDYVTDIAQTIKTQQADAYVHPYAEISANVPEDAVFETNADG 245

Query: 236 ---------------------------------YSVQAMMKIIRDDLKALNIQHDIFISE 262
                                             ++  +++ I+DDL    ++ + + SE
Sbjct: 246 EQELVSGDKNAHVDGIIANSKQALGDNYEIFLNAALSEILEDIKDDLNDFGVRFERWFSE 305

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                     I  ++  L  +GY+YE                      FRST  GD+ DR
Sbjct: 306 KSI----ADEIEPVLAELESKGYLYE----------------KDGNTWFRSTDFGDEKDR 345

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            + +++G  TYFA+D+AY K K+ERGFD +I V G+DH GY+ R+ A   A+   + ++ 
Sbjct: 346 VVRRANGLTTYFASDIAYHKNKFERGFDTVINVWGADHHGYIARVRAALTALGIDEKRLE 405

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V+L + V L+R    I+MS R+G F+TLR + +EVG+D+ RF  + RK    +DFD    
Sbjct: 406 VILVQFVALWRGEEKIQMSSRSGKFVTLRELREEVGNDAARFYYVARKPEVHIDFDLELA 465

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K QSK+N V+Y+QYA+AR  S+  +      ++D     +    Q      +E +LI  L
Sbjct: 466 KSQSKDNAVYYIQYAHARVCSVLEKLNAKGFNVD---DAQGKAMQNLLQAEAESELIKLL 522

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA----NNRKLTMM 558
           A YP  ++ A    +P+ L  YL DLAS+FH  ++  R  P               L   
Sbjct: 523 AAYPATLKRAATGYDPHVLTNYLKDLASLFHAWYNDNRILPVSIIADEKPTQEELDLMQA 582

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL+L  AV  ++ +GL+++G+ +P  M
Sbjct: 583 RLRLSKAVRQVLANGLSLLGLSAPTNM 609


>gi|50083449|ref|YP_044959.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81393974|sp|Q6FFM0|SYR_ACIAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49529425|emb|CAG67137.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 596

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/629 (29%), Positives = 313/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AM+ S+  G+ 
Sbjct: 1   MN--TAIQAALDHVVQSLQQEGILPSDWNNNSTLTRTKDRSHGDFASNIAMVGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I   G  YG+  +   
Sbjct: 59  PRDLAEKILASLPEVADITKAEIAGPGFINFFLNADQRFAVLDQIQAQGQYYGQTQVNAE 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAQVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEE----- 227
            + RY + L       P+  Y G Y+K + + + DK     +        N PE+     
Sbjct: 179 TYLRYLELL-GQPLVFPKNAYQGDYVKEIAQSIIDKDGDAYVRSVADVYRNVPEDVQYAE 237

Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                          +   +    +++A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLIGQGYRVFHQAALKAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D + SE          I + +  L ++GY+YE                    + F+ST  
Sbjct: 298 DQWFSEASL----TQKIDEALQTLDQRGYLYE----------------KEGNIWFKSTKF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ +++ + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLDKLQRGYTHIVDIWGSDHHGYIARVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             +++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSSKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRELRQEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A      + F+           + D +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKA--NSTQMRFNQTQARQFANRLDLD-AET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP ++  A  A EP+++  YL +LA++FHG ++  +       V   + +LT
Sbjct: 515 EILAKLAAYPDILVRAANAYEPHQIGNYLKELAALFHGWYNEHK-------VLTEDVELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL+++GV +P  M
Sbjct: 568 QARLLLSVNVQQVLRNGLDLLGVSAPEAM 596


>gi|291541511|emb|CBL14621.1| arginyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 578

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/585 (31%), Positives = 306/585 (52%), Gaps = 21/585 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                ++N +++     ++ +      +IE P D +HG  +TNAAM  ++   + P  IA
Sbjct: 10  QLKKAIENAIEKAISNGELPQAETAPFIIETPADRSHGDFATNAAMAGAKAFRMPPFKIA 69

Query: 66  ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I + + ++  + D    AG GFIN +L   +   ++  I+ +   YGR+  G+  KV 
Sbjct: 70  QAITSNLDLEGTMFDRFETAGPGFINFFLGTEFYSAVIREILANPEAYGRSEYGRDEKVM 129

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD LA+++  +GY   RE+Y+NDAG QI     S+  R
Sbjct: 130 VEFVSANPTGPMHMGNARGGALGDCLAAVLDKAGYNAWREFYVNDAGNQIEKFGCSLEAR 189

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y Q    ++ + PE  Y G  +K + KE AD     L+N   E+    + DY++   +K 
Sbjct: 190 YLQIFKGDEIEFPEDGYQGEDIKDLAKEYADLNGDSLVNVSAEERKKALVDYALPKNIKK 249

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE---GILPPPKSKTTQK 301
           ++ D++   I +D +  E + H+     ++ ++D L  +G  YE    +    K   TQK
Sbjct: 250 MQADMEKYKIFYDKWFFESELHK--SGAVKAVVDLLTEKGLTYEKEGAVWYKNKEVLTQK 307

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              + K   +   +  +  D  L++ +G+ TYF AD+AY K K++RGF  +I V G+DH 
Sbjct: 308 LLKEGKSQKYIDNL--ELKDDVLIRQNGNPTYFTADIAYHKNKFDRGFTTLIDVWGADHH 365

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G+V R++    A+     ++NV+L +LV+L +DG  ++MSKR G  I L  ++DEV  DS
Sbjct: 366 GHVMRMKGAMDAIGYDGDKLNVVLMQLVKLVKDGELVRMSKRTGKAIQLGDLLDEVPVDS 425

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLF 480
            RF+   ++ +  +DFD      Q  +NPV+YVQYA+AR  SIF+  AK+     +    
Sbjct: 426 ARFLFNTKEANTQMDFDLDLAVSQDNQNPVYYVQYAHARICSIFKSLAKEGISPRECTDA 485

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              ++         E +LI HLA Y   I +A    +P K+  Y+  LA++FH  ++  R
Sbjct: 486 ELALLTA-----PEEKELINHLASYTNEIISAAKDYDPTKVTRYVTQLATLFHKFYNACR 540

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V+     L   RL L + V ++I + L +  +  P  M
Sbjct: 541 -------VKGEEEGLMQARLALCNCVRAVIKNVLTMFNISCPESM 578


>gi|114331591|ref|YP_747813.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313625|sp|Q0AFN4|SYR_NITEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114308605|gb|ABI59848.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 586

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 195/613 (31%), Positives = 312/613 (50%), Gaps = 67/613 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF S     L +   K  + ++    I ++RP+   HG  STN AM L++ L  +PL +A
Sbjct: 8   DFRSHCVQLLAQAV-KQVLPEETEIHIELQRPKQMDHGDYSTNLAMKLAKRLRRNPLELA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++++  +   P V    +AG GF+N +L  +  ++ L +++ +   +G + +G G  + I
Sbjct: 67  KVLIGALPDSPYVGKTVVAGGGFVNFFLKKTAKQQFLLTVLQAADSFGHSKLGAGKTIQI 126

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HVGH R A  G +LA++MA +GY VTRE+Y+NDAG Q++ LALS + RY
Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANIMAAAGYAVTREFYVNDAGRQMDILALSTWLRY 186

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------------ 227
              L       P   Y G Y+  +  E+   +     ++ +                   
Sbjct: 187 LD-LCGIALPFPSNAYQGRYVVDMALEIHRIHGDRYAHYSDSPTQQLAEINAKAAADGED 245

Query: 228 ---------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                          +    + ++ +   +   R+DL    ++ + + SE      D   
Sbjct: 246 EYLDNLITAAKSILGEDYAYLHNFVLTEQLNDCRNDLMEFGVEFENWFSEQSLF--DSGM 303

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +  L  +  +Y                     L F+ST  GD+ DR + + +G YT
Sbjct: 304 VARAVQLLDDKKLLYR----------------QDGALWFQSTGFGDEKDRVVQRENGQYT 347

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           YFA+D+AY   KYERGFD M+ + G+DH GY+ R++    A+S    ++ + L +   LY
Sbjct: 348 YFASDIAYHLSKYERGFDYMLNIWGADHHGYISRVKGAIEALSLDSDKLEIALVQFAVLY 407

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RDG  I MS R+G+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K QS +NPV+
Sbjct: 408 RDGNKISMSTRSGEFVTLRQLRQEVGNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVY 467

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  S+  Q          D+F R     E   + +EL L+  + ++P  IE A
Sbjct: 468 YVQYAHARICSVLEQWGGA-----VDIFGRA--ETELLTNPAELVLLQKIIDFPDTIEAA 520

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ +AF+L +LAS FH +++  R           +  L + RL L+ AV  +++ 
Sbjct: 521 AKEHAPHLIAFFLRELASEFHSYYNSTRF-------LIPDEALKIARLALISAVCQVLSK 573

Query: 573 GLNIIGVESPNEM 585
           GL+++GV SP +M
Sbjct: 574 GLSLLGVTSPRKM 586


>gi|313892155|ref|ZP_07825748.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119293|gb|EFR42492.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 554

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 193/586 (32%), Positives = 303/586 (51%), Gaps = 33/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +    ++          ++ K     +  +E       G  S+NAAM  +R   +
Sbjct: 1   MEVRDELKELIEKAKLAAVESGELPKGDYPPVQRLELSPKKEFGDYSSNAAMQWARVAHM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE++V  I     V    IAG GFIN +L+ + +   L  I+  G  YG      
Sbjct: 61  APRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKNTVYAELKKILAKGENYGDLPRND 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V +E+VSANPTGP+H+GH R A  G  + +L+  +GY+V  EYYINDAG QI+ LAL
Sbjct: 120 EEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVLAEYYINDAGNQIDNLAL 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  RY Q L   D+ LPE  Y G  +    + + D+  ++ L   EEK + + K+ +++
Sbjct: 180 SVNARYLQLL-GKDAQLPENGYHGHDIIETAQSILDRDGTKYLEMDEEKRIEVFKEVALK 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  ++ DL   N++ D+++SE  F+   P  + +++D L + G +YE           
Sbjct: 239 EKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKKNGTLYE----------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                        +T  GDD DR +++S+G  TYF +D+AY K K ERG+  +I + G+D
Sbjct: 285 -----KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVKNKIERGYHKLIDIWGAD 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ R+++   ++       +++L ++V L RDG P+KMSKR G  +TLR ++DEVG 
Sbjct: 340 HHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSKRTGQSVTLRELMDEVGV 399

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  R+    R     +DFD    K++S ENPV+Y+QYA AR  S+F+QA++    +    
Sbjct: 400 DVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVHSLFKQAEENGVKIP--- 456

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +      D SEL LI  +  Y   ++ A   + P ++A Y Y+LA++FH  +   
Sbjct: 457 -SWEDVDFTVLVDESELDLIKKMEVYHGFLKGAAAERAPQRIATYAYELAALFHHFYRKC 515

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       +     KL   RL L+ AV  ++   L I+GV +P EM
Sbjct: 516 R-------ILGEEEKLMQARLGLIRAVGYVLVHALGILGVSAPEEM 554


>gi|300789616|ref|YP_003769907.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299799130|gb|ADJ49505.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 553

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 290/582 (49%), Gaps = 33/582 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A  +  +++   ++     ++  +L +++ IERPR+  HG  +TN A+ +++  GL P  
Sbjct: 4   AALADLVRSSAVQVLAARGIDDAVLPEQVTIERPRNPDHGDYATNLALQVAKKAGLKPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            AE + A +  D  V S  +AG GF+N  L+ +    I+  ++ +G  YGR     GT++
Sbjct: 64  FAEALAAAVSADDGVASAEVAGPGFLNFRLAAAAQGDIVRQVLDAGAAYGRGDALAGTRI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD L  ++A  G +VTREYY NDAGAQI+    S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLAAQGADVTREYYFNDAGAQIDRFVRSLIA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+  +  E+     S  L+ PE +     +   +  M  
Sbjct: 184 AAK------GEPAPEDGYAGGYINDIAAEVIKAEPSA-LSLPEAERHETFRRIGINLMFS 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+  H  +   +   +  L   G +Y                
Sbjct: 237 EIKQSLHDFGTDFDVYFHENSLH--ESGAVDAAVQQLKDSGNLY---------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            D      +S+  GDD DR ++K DG+  Y A DLAYFK K  RGFD  IY++G+DH GY
Sbjct: 279 FDEGAWWLKSSEYGDDKDRVVIKQDGNPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             RL+A AAA  +  A + VL+ ++V L  DG P++MSKRAG  IT+  +V+ VG D  R
Sbjct: 339 TARLKAAAAAFGDDPATVEVLIGQMVNLVSDGKPVRMSKRAGTVITMEDLVEAVGVDPAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D   +++ S +NPV+YVQYA+AR  ++ R A       D  L    
Sbjct: 399 YELIRYSVDSTLDVDLDLLRKHSNDNPVYYVQYAHARLCTMLRGA------ADLGLKSTE 452

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +         E  LI  + E+P  +  A   +EP+++A YL +LA   H  +   RE  
Sbjct: 453 DVDLGQLTLPVEGDLIRTIGEFPETVRRAAEMREPHRIARYLEELAGALHKFY-AVREAR 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L             R+ L  A   ++ +GL ++GV +P  M
Sbjct: 512 VLPKGDEAATPANHARVALCEAARVVLANGLALVGVSAPERM 553


>gi|222530004|ref|YP_002573886.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456851|gb|ACM61113.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 561

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 200/592 (33%), Positives = 322/592 (54%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L           ++N +K    K   E   +  I+IE+P++ +HG  +TN AM L+R 
Sbjct: 1   MNLVKLAKQQIQDVVQNAIKNCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60

Query: 57  LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L  +P  IA  IV  I + +  ++ V +AG GFIN +    +L K++  I+  G +YG+ 
Sbjct: 61  LKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   + DLPE  Y G  +    KE  D++  +L N   ++    + D
Sbjct: 181 KFGQSLEIRYRQ-LKGENVDLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ L+   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ + +   D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFAASKIDESLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD       ++ QE E +  +  L +        IE A    +  ++  YL DLAS+FH
Sbjct: 462 VLDKSRIKVELLQQEEELELLKKLLELP-----EEIEMAAKNLDVSRVTKYLLDLASMFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V+  N +L   RL LV  V  +IN+ L ++GV++P +M
Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVDAPEKM 561


>gi|187922480|ref|YP_001894122.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689569|sp|B2SWV4|SYR_BURPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187713674|gb|ACD14898.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 596

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 190/615 (30%), Positives = 308/615 (50%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L   +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLAETVKQVATASQGASEAAFVSPAITLERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +    +    V++  +AG GFINL L+ +  + +++++      +GR+    
Sbjct: 69  LAQQIVDALLAQPQAKGLVEAAEVAGPGFINLRLAAAAKQAVIAAVFAEKEAFGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD L++++A  GY+V RE+Y NDAG QI TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGYDVHREFYYNDAGVQIQTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  P   Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLAPGDAGWPASAYNGEYIAEIARDYLNGVTVAASDGEPVTGARDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   ++     +   ++ L   G  YE     
Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVEALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            V GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NVQGSDHHGTIARVRAGLQGLGVGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+  + K  +   +  L   +V P  SE     + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVIAECKARYSTDESTLADVDVSPLTSE---RAMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++      R   V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYND-----RTERVLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL  IGV +P +M
Sbjct: 582 ANGLATIGVSAPVKM 596


>gi|258646587|ref|ZP_05734056.1| arginine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404001|gb|EEW97548.1| arginine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 554

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 192/552 (34%), Positives = 287/552 (51%), Gaps = 32/552 (5%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G  STNAAM  +R    +P  IAE IV  I   P V  + IAG GFIN +L
Sbjct: 35  LEIPKAKEFGDYSTNAAMQWARTAHKEPRAIAESIVKYIDA-PLVSKMEIAGAGFINFFL 93

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +   +   L +I+ +G  YG     K  K+ +E+VSANPTGP+H+GH R A  G  L +L
Sbjct: 94  AADTVYAELRNILSAGASYGDLPKDKKDKILVEYVSANPTGPLHIGHARGAAYGSALVNL 153

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  +GY+V  EYY+NDAG+QI  LA SV  RY Q L   D+D+PE  Y G  +    K L
Sbjct: 154 LRAAGYDVYAEYYVNDAGSQIAHLAESVNARYLQLL-GKDADVPEDGYHGYDIVETAKSL 212

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+     L+  EE  L + K  ++   + I++ DL   ++  D + SE   +   P  +
Sbjct: 213 IDREGDAYLSMDEEARLKVFKTVALNEKLSILKKDLADFHVTFDNWFSEKSLY---PKQV 269

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D +  L + GY+YE                        +T  GDD DR +++++G  TY
Sbjct: 270 DDALAALKKDGYLYE----------------KDGAWWLATTKNGDDKDRVVIRANGEPTY 313

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           F +D+AY   K +RG++ +I + G+DH GY+ R+ +    +        ++L ++V L R
Sbjct: 314 FCSDIAYVPNKEKRGYNKLIDIWGADHHGYIIRIHSAMKFLGYDPEDFEIMLLQMVTLLR 373

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG P+KMSKR G  +TLR ++DEVGSD+ R+    R     +DFD    K+QS +NPV+Y
Sbjct: 374 DGQPVKMSKRTGQAVTLRELMDEVGSDAARYFFCSRTLDSQMDFDIDLAKKQSSDNPVYY 433

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYA AR  S+F QAK+                     +  EL L+  +  Y  +I+ A 
Sbjct: 434 IQYANARIHSLFAQAKEAGVKWG----DWEKTDFTKLTEECELDLVKKMENYHMLIDGAA 489

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             + P ++A Y Y+LA +FH  +   R       +      +T  RL L+ AV  ++   
Sbjct: 490 KERAPQRIAKYAYELAGLFHHFYRECR-------ILGVEEGVTQARLGLITAVQHVLVHA 542

Query: 574 LNIIGVESPNEM 585
           L+I+GV +P  M
Sbjct: 543 LSILGVSAPERM 554


>gi|222109552|ref|YP_002551816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782960|sp|B9MBD2|SYR_DIAST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221728996|gb|ACM31816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 567

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 182/597 (30%), Positives = 293/597 (49%), Gaps = 51/597 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   L +   K+        R   E P+  AHG L+  AAM L++PL  +P  + E
Sbjct: 4   VKQELLAALADELEKVSPGAG--SRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGE 61

Query: 67  LIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            + A ++  P        + IAG GF+N+ L P+  ++++  ++  G +YG     +G K
Sbjct: 62  QLQAALEATPAFQKWVQAIEIAGPGFLNIRLKPAAKQQVVREVLAQGAQYGYQPA-RGEK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A +GD ++ L A  G+ V RE+Y NDAG QI+TL  S  
Sbjct: 121 VLVEFVSANPTGPLHVGHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQ 180

Query: 183 WRYQQALYNND-------SDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWL 230
            R +     +D       + L + +Y G Y++ +      K              + +  
Sbjct: 181 LRAKGFKPGDDCWPTDSENPLAKNFYNGDYIQDIADAFLAKATVQADDRAFTANGDVEDY 240

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++ ++V  +      DL+A N+Q D +  E   +      +   +  L   G  YE  
Sbjct: 241 ENIRQFAVAYLRNEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-- 296

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                             L  +ST  GDD DR + K DG+YTYF  D+AY   K++RGF 
Sbjct: 297 --------------QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFT 342

Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            ++ + G+DH G + R+ A   A  V   +   + +L  +VR+ R+G  +K+SKRAG ++
Sbjct: 343 KVVNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYV 402

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR +++    D+VRF +L RK      FD      Q+ +NPV+YVQYA+AR  S+ R  
Sbjct: 403 TLRDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGW 462

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           ++     D+D+     +            L++ LA+YP ++  A     P+ + FYL DL
Sbjct: 463 RE-----DYDVAALRDVDLSPLEGPQAQALMLLLAKYPEMLTAAAAGNAPHDVTFYLRDL 517

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ +H ++   R       +  ++  +   RL LV A A ++++GL ++GV +P  M
Sbjct: 518 AAAYHSYYDAER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 567


>gi|291287007|ref|YP_003503823.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884167|gb|ADD67867.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 549

 Score =  524 bits (1351), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/579 (31%), Positives = 307/579 (53%), Gaps = 34/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   ++++  +  +E  +     IE P +  HG  + NAAM  +R     P+ IA+
Sbjct: 5   LQSLLDTAIEDMIKENGLEGSV-PEYTIEVPNNSEHGDFAANAAMKSARIFRTKPMDIAK 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  R+K  P +        GFIN ++   +   ++         +  + +G+  K  +E
Sbjct: 64  KLCERVK-HPMIKKSEAVMPGFINFFIDNGFYHDVVKRAATDDSFF-ESDMGQKRKTMVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A  GD+LA ++A +G++V  EYY+NDAG Q+N L  S++ RY 
Sbjct: 122 FVSANPTGPLHVGHGRNAAYGDSLAKILAAAGFDVHTEYYVNDAGNQMNNLGKSIYVRYM 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L   +   PE  Y G Y+  + KEL +++  ++   PE++   +     ++ +   I 
Sbjct: 182 E-LAGGEIPFPEDGYHGEYIIDIAKELFEEHGHKIAEMPEKEGTDVCFKKGLKDITANIA 240

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + LK   +  + + SE   +  +   +   +D L  +G++YE                  
Sbjct: 241 NTLKNFKVDMEEYFSEKSLY--ENGDVPASLDYLKERGFIYEL----------------D 282

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F+ST  GDD DR + +S+G YTYFA+D+AY K KY+RGF   I V G+DH GYVKR
Sbjct: 283 GALWFKSTEFGDDKDRVVKRSNGEYTYFASDIAYHKNKYDRGFKTTIDVWGADHHGYVKR 342

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L +   A+  +  +  V L ++V L   G  + MS RAG FI L  +++EVGSD+ R+  
Sbjct: 343 LSSAIEAIGYEDREFAVSLIQMVNLVNGGERVSMSTRAGSFIELDWLINEVGSDASRYFY 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
             R      DFD    K++  +NPVFY+QYA+AR +S+ R+A +     +          
Sbjct: 403 SMRDYEAQFDFDIALAKKRESDNPVFYIQYAHARVQSVLRKAAEENIAYEI------CAG 456

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            ++     EL+LI  + +Y  V+E +   ++P+++ +YL +LA++FH ++ +       +
Sbjct: 457 LDNLNSKEELELIKKIYDYINVLEQSARNRQPHRVGYYLQELAAMFHSYYFNN------K 510

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + ++N+ LT  RL L  AV + I +GL ++GV +P+ M
Sbjct: 511 MLNSDNKDLTSARLTLAQAVGNTIRNGLALLGVSAPDRM 549


>gi|73748954|ref|YP_308193.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|109894987|sp|Q3ZYF0|SYR_DEHSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|73660670|emb|CAI83277.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 556

 Score =  524 bits (1351), Expect = e-146,   Method: Composition-based stats.
 Identities = 197/589 (33%), Positives = 316/589 (53%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57
           M       + +   L +   K + E +I      I IE P+   +G  +T+  + L++  
Sbjct: 1   MNSILAIKNIIIESLSQAMEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           G  P+ +A+++ + I+    +  V +A  GFIN   S  +L  ++ +I+     YG   +
Sbjct: 61  GKRPMELAQILASYIETGSGISKVSVAPPGFINFTFSKEWLCSLVKTILTEAGSYGNINM 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G++V IEFVSANPTGP+H+GH R AV+G TL++++  +GY V  E+YINDAG+QI+  
Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNILKAAGYYVEEEFYINDAGSQIDAF 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++F RYQQAL   D+ +P+  Y G Y+  +  E+  KY  + L  P +     + +  
Sbjct: 181 KRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAAEMVTKYGDKYLQMPADIAQNDLGEIG 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  M+ +I DDLKAL +  DI+ SE   + G     +  +D L+   Y+ E         
Sbjct: 240 MARMLCLISDDLKALKVDFDIWFSERSLYSG--GQYKTAMDILSGNNYIAE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
                        F ST++GD  D  +++SDG+ TYFA+D+AY   K+ ER FD +I + 
Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH G+V R++A+ +A+     ++  LL +++ L R G  +++SKR G+ I+LR V++E
Sbjct: 342 GADHQGHVSRMKAMVSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEIISLREVIEE 401

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG+D+ RF  L R     +DFD    K++S ENPV+YVQYA+AR  SI   A +   D  
Sbjct: 402 VGADACRFFFLARSTESQMDFDLELAKKESAENPVYYVQYAHARICSILHLAAEKQLDYS 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                      E E        I  +AE P ++E  +   EP+ L +Y  +LA+ FH  +
Sbjct: 462 TGDTDLLGEEAELEL-------IRKMAELPEIVETVSRTLEPHHLTYYAQELANAFHQFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R       V ++N +LT  RL+LV A   ++   L+++G+ SP  M
Sbjct: 515 KDCR-------VISDNAELTCARLKLVDASRIVLARTLHLMGMTSPESM 556


>gi|320534480|ref|ZP_08034950.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133311|gb|EFW25789.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 561

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 191/587 (32%), Positives = 305/587 (51%), Gaps = 37/587 (6%)

Query: 6   DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           + ++ ++  L+E   +    +    +    +ERPR+  HG  STN AM L++  G  P  
Sbjct: 5   ELAAAIRTVLEEASAEGSLALPAAEIPDPRVERPRNRDHGDWSTNVAMQLAKKAGTKPRD 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AEL+V R++    + SV +AG GF+N+ L  +   ++  SIV +G  YGRN    G  +
Sbjct: 65  LAELLVPRLEALNGIASVEVAGPGFLNIRLDAASAGELARSIVEAGEAYGRNDSLSGQHI 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+E+VSANPTGP+H+G  R A VGD+LA +++  G EVTREYY ND G QI+  A S+  
Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGAEVTREYYFNDHGTQIDRFARSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239
             +          PE  Y G Y+  + +++ AD+ ++   +    P+ +   + +   V 
Sbjct: 185 SAR------GEQTPEDGYGGAYISEIAQQVTADELAAGRPDPATLPDVEATEVFRSRGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   ++ +L A     D+F  ED  H      +   I  L  +G +             
Sbjct: 239 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAITRLRERGVI------------- 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              +        R+T  GDD DR L+KSDG+  YFAADLAY+  K ERG D  +Y+ G+D
Sbjct: 284 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGADCALYLFGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H GY+ R+ A+ AA  +     + +L+ +LV L R+G+P++MSKRAG  + L  +VD VG
Sbjct: 341 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTIVILEDLVDAVG 400

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +       ++D D   +   + +NPV+YVQYA+AR R++ R A +     D +
Sbjct: 401 VDAARYALARSSMDSMIDIDLDLLASSTSDNPVYYVQYAHARTRNVARNAAEHGVSRDPN 460

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             P      +   D + L +   LA++P  +  A   +E +++A YL  LA+ +H  +  
Sbjct: 461 EAPFEPAALDDPADAALLGV---LAQFPATVAQAASLREQHRVARYLEQLAAAYHAWYGA 517

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  PR      +     + RL L  AV  ++ +GL ++GV +P  M
Sbjct: 518 TRVTPRGDDAVGSG---HVARLWLNDAVGQVLANGLGLLGVAAPERM 561


>gi|293611162|ref|ZP_06693460.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826413|gb|EFF84780.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 596

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 188/629 (29%), Positives = 316/629 (50%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWKNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKVLAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++Y+                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYQ----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A  +  DL FD+            D +E+
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKA--VSTDLQFDVNAARPHAARLSLD-AEI 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP  +  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDTVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPESM 596


>gi|68536439|ref|YP_251144.1| arginyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68264038|emb|CAI37526.1| argS [Corynebacterium jeikeium K411]
          Length = 592

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 181/585 (30%), Positives = 292/585 (49%), Gaps = 36/585 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ S  +    +       ++  ++     +ERPR+  HG  +TN AM +++  G +P  
Sbjct: 40  AELSELITETARTTLDAHGLDSSVVPESATVERPRNPEHGDYATNIAMQVAKKAGTNPRE 99

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
               +   +     +D   +AG GFIN+ L+ +   KI+  I+  G  +G      G  +
Sbjct: 100 FGTWLAESLGAHEGIDEATVAGPGFINIRLAAAAQGKIVEDILTVGANFGHGDELAGAAI 159

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++   G +VTREYY ND GAQI+  A S+  
Sbjct: 160 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLNARGAKVTREYYFNDHGAQIDRFARSLVA 219

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ +  ++  + + +      ++   + +   V+ M  
Sbjct: 220 AAK------GEPTPEDGYGGDYIQDIASQIV-EANPDWQKLGADEAQELFRSQGVELMFA 272

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L     + D++  E+     +   +   I  +   G +YE               
Sbjct: 273 HIKRTLAEFGTEFDVYFHENSLF--ESGAVEAAIQKIKDNGNLYEA-------------- 316

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG+  Y A D+AY   K++RG +  IY++G+DH GY
Sbjct: 317 --DGAWWLRSTNFGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLCIYMLGADHHGY 374

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+     Q+ VL+ +LV L +DG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 375 IARLRAAAAAMGYDPQQVEVLIGQLVNLVKDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 434

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + M+       LD D      +S +NPVFYVQYA+AR  S+ R+A+D+   +  +    +
Sbjct: 435 YAMIRSSVDSSLDIDMDLWASKSNDNPVFYVQYAHARLCSLARKAEDLG--VTREGADLS 492

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V++ A   +EP+++A Y   LA  FH  +   +  P
Sbjct: 493 LLTHDREGD-----LIRTLGEFPAVVKTAAELREPHRVARYAESLAGTFHRFYDACQILP 547

Query: 544 RLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    +   A N+ L   RL L  A    + + L ++GV +P  M
Sbjct: 548 KPSDDEQTVAENKALFAARLSLAAASRQTLANALELLGVAAPERM 592


>gi|323516220|gb|ADX90601.1| arginyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 596

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIEEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ +++ + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       +      +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP V+  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|169797659|ref|YP_001715452.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156483|ref|YP_001844822.1| arginyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155547|ref|YP_002317592.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215485013|ref|YP_002327254.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239503058|ref|ZP_04662368.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|260557602|ref|ZP_05829816.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347274|ref|ZP_07228015.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510644|ref|ZP_07235881.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301597695|ref|ZP_07242703.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852639|ref|ZP_08434293.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332869354|ref|ZP_08438732.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226701370|sp|B7H2A9|SYR_ACIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701511|sp|B7I1U9|SYR_ACIB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558748|sp|B2I0Y7|SYR_ACIBC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558750|sp|B0VBN5|SYR_ACIBY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169150586|emb|CAM88495.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208077|gb|ACC55475.1| Arginyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213054707|gb|ACJ39609.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987391|gb|ACJ57690.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260408775|gb|EEX02079.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322506351|gb|ADX01805.1| argS [Acinetobacter baumannii 1656-2]
 gi|332729107|gb|EGJ60454.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732772|gb|EGJ63988.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 596

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ +++ + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       +      +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP V+  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|147669721|ref|YP_001214539.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189083531|sp|A5FQ65|SYR_DEHSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146270669|gb|ABQ17661.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 556

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 197/589 (33%), Positives = 317/589 (53%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57
           M       + +   L +   K + E +I      I IE P+   +G  +T+  + L++  
Sbjct: 1   MNSILAIKNIVIESLSQAMEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           G  P+ +A+++ + I+    +  V +A  GFIN   S  +L  ++ +I+     YG   +
Sbjct: 61  GKRPMELAQILASYIETGSGISKVSVAPPGFINFTFSKEWLCSLVKTILTEAGSYGNINM 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G++V IEFVSANPTGP+H+GH R AV+G TL++++  +GY V  E+YINDAG+QI+  
Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNILKAAGYYVEEEFYINDAGSQIDAF 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++F RYQQAL   D+ +P+  Y G Y+  +  E+  KY  + L  P +     + +  
Sbjct: 181 KRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAAEMVTKYGDKYLQMPADIAQNDLGEIG 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  M+ +I DDLKAL +  DI+ SE   + G     +  +D L+   Y+ E         
Sbjct: 240 MARMLCLISDDLKALKVDFDIWFSERSLYSG--GQYKTAMDILSGNNYIAE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
                        F ST++GD  D  +++SDG+ TYFA+D+AY   K+ ER FD +I + 
Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH G+V R++A+ +A+     ++  LL +++ L R G  +++SKR G+ I+LR V++E
Sbjct: 342 GADHQGHVSRMKAMVSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEIISLREVIEE 401

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG+D+ RF  L R     +DFD    K++S ENPV+YVQYA+AR  SI   A++   D  
Sbjct: 402 VGADACRFFFLARSTESQMDFDLELAKKESAENPVYYVQYAHARICSILHLAEEKQLDYS 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                      E E        I  +AE P ++E  +   EP+ L +Y  +LA+ FH  +
Sbjct: 462 TGDTALLGEEAELEL-------IRKMAELPEIVETVSRTLEPHHLTYYAQELANAFHQFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R       V ++N +LT  RL+LV A   ++   L+++G+ SP  M
Sbjct: 515 KDCR-------VISDNAELTCARLKLVDASRIVLARTLHLMGMTSPESM 556


>gi|169632154|ref|YP_001705890.1| arginyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|229558749|sp|B0VNJ1|SYR_ACIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169150946|emb|CAO99561.1| arginyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 596

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNVA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ +++ + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       +      +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP V+  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|311103352|ref|YP_003976205.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758041|gb|ADP13490.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 560

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 183/585 (31%), Positives = 294/585 (50%), Gaps = 48/585 (8%)

Query: 14  YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
            L +      +   + + +++ERP+  AHG ++TN AM L++P   +P  +A+ IV  + 
Sbjct: 11  SLIQAAVAQSLPDAVAN-VLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIVDALM 69

Query: 74  IDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             P     ++S  IAG GFINL ++ +  + +++++   G  +GR+    G K+ +EFVS
Sbjct: 70  AQPGAAGLIESAEIAGPGFINLRITAAARQAVIAAVAEQGAAFGRS-PRSGEKILVEFVS 128

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+HVGH R A +GD L  L    G++VTRE+Y NDAG QI+ LA+SV  R +  L
Sbjct: 129 ANPTGPLHVGHARQAALGDALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQARAR-GL 187

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKI 244
                D P   Y G Y+  + ++            +++   +   L  ++ ++V  + + 
Sbjct: 188 TTESPDWPVDGYKGDYIADIARDFQAGATVHSDGVDVIATGDVDNLDDIRVFAVAYLRRE 247

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
              DL+A  +  D +  E   +      +   +  L   G+ YE                
Sbjct: 248 QDLDLQAFGLAFDNYYLESSLYT--SGRVEATVKALVAGGHTYE---------------- 289

Query: 305 DRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           +   L  R+T +G  DD DR + KS+G YTYF  D+AY K K+ERGF   + + GSDH G
Sbjct: 290 EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHG 349

Query: 363 YVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            V R+ A   A+     K     +L ++V++ R G  +K+SKRAG ++T+R ++D VG D
Sbjct: 350 TVARVRAGLQALEEGIPKDYPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRD 409

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  S+   A            
Sbjct: 410 AVRYFLIQRRADTEFVFDVDLALSKSDENPVYYIQYAHARICSVINNAA-------MPAA 462

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                        +E  L+  LAE+P V+  A     P+ +AF+L D AS FH  +   R
Sbjct: 463 DVAQADAALLTAPTEFALMQRLAEFPNVVALAAQELSPHHIAFWLRDCASDFHAWYGAER 522

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V  ++  L + RL+L      ++ +GL ++GV +P  M
Sbjct: 523 -------VLIDDTALKLARLRLASTTRQVLANGLELMGVSAPERM 560


>gi|262374635|ref|ZP_06067908.1| arginyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310425|gb|EEY91516.1| arginyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 599

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 191/629 (30%), Positives = 313/629 (49%), Gaps = 74/629 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       S L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQSALDHAVQSLQQQGILPSDWTNTSHLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I     +YGR+ +   
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQKDQYGRSQVNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L       P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLE-LTGQILVFPKNAYQGDYVKEIAQSIIDKDGDAHVRPVADIYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDADGNKVVLSGDKEKHIDGLIANSQQHLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D + SE          I + +  L ++G++YE                    + F+ST  
Sbjct: 298 DQWFSEASL----ADKIDEALATLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR  SI  +AK+     D     +     +     +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAKEKGIVFDATNARQFA---DLLTLETET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP ++  A    EP+++  YL DLA++FHG ++       ++FV   N  L+
Sbjct: 515 EILAKLAAYPEIVVRAANVCEPHQIGNYLKDLAALFHGWYAQ----DGVKFVDETNTSLS 570

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P+ M
Sbjct: 571 QARLLLSTNVQQVLRNGLELLGVSAPDSM 599


>gi|225850150|ref|YP_002730384.1| arginyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646328|gb|ACO04514.1| arginyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 552

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 200/584 (34%), Positives = 331/584 (56%), Gaps = 33/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  +   ++   LK+   +I    ++ ++I +E P++   G +S NAA +LS+ L   PL
Sbjct: 1   MKEELKKKIVELLKDEIPQI---SEVEEKIKVEIPKEDRFGDISINAAFLLSKILRDKPL 57

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I   ++   +   V +AG GFIN++LS  +   IL  I+     YGR+   +G  
Sbjct: 58  NIAQRIKNILENVEEFSKVEVAGAGFINIFLSRKFYADILKRIIQEKENYGRSEKKEGYI 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            N+EFVSANPTGP+H+GH R AVVG+ +++L  ++GY V RE+YINDAG QI  L  SV+
Sbjct: 118 -NVEFVSANPTGPLHLGHGRGAVVGNVVSNLYEYAGYTVEREFYINDAGRQIYKLGESVY 176

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAM 241
            R++Q +   D   PE  Y G Y+K + + L      ++L+   E++ +    +++   +
Sbjct: 177 ARFRQ-IDQPDYPFPEDGYHGEYIKEIAQHLYKYEKEKILSMVDEKQAIDFCSEFAKDML 235

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++ I++DLK   +  DI+ SE   +      + + I+ L ++G +YE             
Sbjct: 236 LERIKEDLKEFGVTFDIWFSERSLY--SSGKVDEAIEFLRKKGLIYE------------- 280

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +  ++T+ GDD DR ++KSDGSYTYFA D+AY   K++RG+D +I V G+DH 
Sbjct: 281 ---KEGAVWVKTTLFGDDKDRVIIKSDGSYTYFAGDIAYHYDKFKRGYDFIINVWGADHH 337

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY  RL++   A   ++  I V+  +LV+L+++G  IKMSKR+G F+TL+ ++DEVG D+
Sbjct: 338 GYFPRLKSAVMAFGVREDWIRVIFIQLVKLFKEGKEIKMSKRSGSFVTLKELIDEVGKDA 397

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V +  L +     L+FD     ++S ENPV+YVQYA+AR  S+FR+AK+ F     + F 
Sbjct: 398 VIYFFLTKDPDTHLNFDIDLALKKSSENPVYYVQYAHARICSVFREAKERFGFDPENDFD 457

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            ++   +   +  E  ++ HL+  P +I  A + ++P+KL    YDLAS FH ++++   
Sbjct: 458 ADI---DLLKEDQERVIMKHLSFIPDLIMEAALKEQPHKLTQITYDLASDFHYYYNN--- 511

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +F+   + KL   RL L+ AV   + +   ++G+     M
Sbjct: 512 ---FKFLVEEDEKLMRARLYLLKAVREALRTLFKLMGITPVERM 552


>gi|312126952|ref|YP_003991826.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311776971|gb|ADQ06457.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 561

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 199/592 (33%), Positives = 320/592 (54%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L           ++N +K    K   E   +  I+IE+P++ +HG  +TN AM L+R 
Sbjct: 1   MNLVKIAKQQIQDVVQNAIKSCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60

Query: 57  LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L  +P  IA  IV  I + +  ++ V +AG GFIN +    +L K++  I+  G +YG+ 
Sbjct: 61  LKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   +  LPE  Y G  +    KE  D++  +L N   ++    + D
Sbjct: 181 KFGQSLEIRYRQ-LKGENIVLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ L+   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ +     D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFAASKIDKSLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD       ++ QE E +  +  L +        IE A    +  ++  YL DLAS+FH
Sbjct: 462 VLDKSKIKVELLQQEEELELLKKLLELP-----EEIEMAARNLDVSRVTKYLLDLASMFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V+  N +L   RL LV  V  +IN+ L ++GV++P +M
Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVDAPEKM 561


>gi|300705360|ref|YP_003746963.1| arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299073024|emb|CBJ44381.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 600

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 196/621 (31%), Positives = 300/621 (48%), Gaps = 69/621 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E      IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LSP+    +L+++   G  YG   +  G  V
Sbjct: 66  IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +  L   ++  PE  Y G Y+  +  +              +    + + +  ++ ++
Sbjct: 186 RAR-GLKPGEAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGACDVENIEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      +R  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVRQTVDALIAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A    +     K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDAESEAGVDTIRACVESGAPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
           S ENPV+YVQYA+AR  S+F Q           L   ++      +     + L+  LA 
Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLAAVAGPDASPQAVALVQRLAA 526

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ 
Sbjct: 527 FPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL +IGV +P +M
Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600


>gi|206890670|ref|YP_002248471.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742608|gb|ACI21665.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 538

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 215/585 (36%), Positives = 328/585 (56%), Gaps = 47/585 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M+ F    +R+   +K +       +       IE P++ A G LST  AM +++ L   
Sbjct: 1   MHKF--LKNRIIETIKILGLPEVEPE-------IEIPKNEAFGDLSTPIAMEIAKKLKKP 51

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P TIA+ I+  I      +SV +AG GFIN      ++   L +++  G  +    IG G
Sbjct: 52  PRTIAQDIIQSINKS-SFESVELAGPGFINFKFKNDFVFSELENLLKLGELFFTQNIGNG 110

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ IEFVSANPTGP+H+GH R A +G  LA+++  +GY V  EYYINDAG Q+  L LS
Sbjct: 111 KKIQIEFVSANPTGPLHLGHGRGAALGAALANILKEAGYNVFTEYYINDAGKQVEILGLS 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+    Q L+  + ++PE  Y G Y+  + KEL D Y + L N   ++    + D+S + 
Sbjct: 171 VYI-ALQNLFGKNLEMPEECYKGEYINEIAKELYDLYGNSLQNKEFDEIADFLIDFSYKK 229

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+  I+ DL    +  D +ISE   +      ++  I  L   G++YE            
Sbjct: 230 MLNEIKKDLDDFGVNFDNWISERKLYH--TGEVQRAILKLKELGFIYE------------ 275

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L F ST  GDD DR ++KSDG+YTYFA+D+AY K K ERGFD +I + G+DH
Sbjct: 276 ----KDGALWFHSTAFGDDKDRVIVKSDGTYTYFASDIAYHKNKIERGFDELINIWGADH 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY++R++A   A+    +QI +LL ++V L R+G P++MSKRAG F+TLR ++DE+G+D
Sbjct: 332 HGYIQRVKAAVQALGMSDSQIKILLVQMVNLLREGKPVQMSKRAGTFVTLRELIDEIGAD 391

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + +F+ L R++   L+FD    K+QS ENPV+YVQYA+AR  SIF +A+        +LF
Sbjct: 392 TTKFIFLTRRHDSHLEFDIEIAKKQSHENPVYYVQYAHARINSIFVKAQSEPERFSGELF 451

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                      +  EL++I     YP + E +   +EP+++ FYL +LA++FH ++   R
Sbjct: 452 -----------NEDELRIIKKALIYPMIFELSVQMREPHRITFYLQELAALFHSYYHKYR 500

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V + N +LT  RL L  A+  ++  GL ++GV++P +M
Sbjct: 501 -------VISENDELTETRLSLCKAIMFVLKHGLRMLGVKAPEKM 538


>gi|83748526|ref|ZP_00945547.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207742125|ref|YP_002258517.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83724830|gb|EAP71987.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206593513|emb|CAQ60440.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 598

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 197/619 (31%), Positives = 300/619 (48%), Gaps = 67/619 (10%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E      IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LSP+    +L+++   G  YG   +  G  V
Sbjct: 66  IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +  L   ++  PE  Y G Y+  +  +              +    + + L  ++ ++
Sbjct: 186 RAR-GLKPGEAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      +R  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVRQTVDALIAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A    +     K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                                         G D+VRF +L RK      FD     +QS 
Sbjct: 407 WSNGDAEAGVDTIRACVESGAPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSD 466

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYP 506
           ENPV+YVQYA+AR  S+F Q           L   ++      +     + L+  LA +P
Sbjct: 467 ENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLAAVAGPDASPQAVALVQRLAAFP 526

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A 
Sbjct: 527 DMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAAT 579

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +GL +IGV +P +M
Sbjct: 580 RQVLRNGLAVIGVSAPQKM 598


>gi|295675302|ref|YP_003603826.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435145|gb|ADG14315.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 596

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 186/615 (30%), Positives = 300/615 (48%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLADTVKQVATATQGATEAAFVSPAIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  + ++P     +D+  +AG GFINL L+ +  + +++++      YGR+    
Sbjct: 69  LAQQIVEALLVNPQAKGLIDTAEVAGPGFINLRLTAAAKQGVIAAVFAEKEAYGRSRRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD LA ++   G++V RE+Y NDAG QI+TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALAHVLESQGWDVHREFYYNDAGVQIHTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D   P   Y G Y+  + K+              +    + + L  +
Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGITVEASDGEPVTGARDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RRFAVTYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            V GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NVQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+     +       D      +          + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVI---AECNARYGLDESVLPSVDLAPLASERSMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LA  FH  ++   E      V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRELAGEFHSFYNDRAER-----VLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL  IGV +P +M
Sbjct: 582 ANGLATIGVSAPVKM 596


>gi|299068188|emb|CBJ39407.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 600

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 196/621 (31%), Positives = 299/621 (48%), Gaps = 69/621 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E      IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LSP+    +L+++   G  YG   +  G  V
Sbjct: 66  IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLTAVFAEGDRYGAADLHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +      D+  PE  Y G Y+  +  +              +    + + +  ++ ++
Sbjct: 186 RAR-GFKPGDAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENMEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      ++  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVQQTVDALIAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A    +     K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDVESEAGVDTIRACVDSGAPNWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
           S ENPV+YVQYA+AR  S+F Q           L   ++      E     + L+  +A 
Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDAASLAGADLAAVAGPEASPQAVALVQRIAA 526

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P V+ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ 
Sbjct: 527 FPDVLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL +IGV +P +M
Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600


>gi|209518210|ref|ZP_03267037.1| arginyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209501325|gb|EEA01354.1| arginyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 596

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 190/615 (30%), Positives = 304/615 (49%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L   +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLAETVKQVATATQGATEAAFVSPAIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +   P     +D+  +AG GFINL L+ +  + ++++++     YGR+    
Sbjct: 69  LAQQIVDTLLAHPQAKGLIDTAEVAGPGFINLRLTAAAKQGVIAAVLAEKDAYGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD LA ++   G++V RE+Y NDAG QI+TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALAHVLGSQGWDVHREFYYNDAGVQIHTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D   P   Y G Y+  + K+              +    + + L  +
Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGVTVEASDGEPVTGARDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RRFAVTYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            V GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NVQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+  +    +   +  L   +V P  SE     + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVIAECNTRYGFEESTLASVDVAPLTSE---RAMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LA  FH  ++   E      V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRELAGEFHSFYNDRAER-----VLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL  IGV +P +M
Sbjct: 582 ANGLATIGVSAPVKM 596


>gi|317131750|ref|YP_004091064.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469729|gb|ADU26333.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 564

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 190/586 (32%), Positives = 308/586 (52%), Gaps = 36/586 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            +    +   +  +    K+  + L    +E P D AHG  S N AM+ +R L + P  I
Sbjct: 10  DEIRHVVMQAMGRLVASGKLPAEPLPPFGVEVPADRAHGDFSANVAMVSARALKMPPRKI 69

Query: 65  AELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE ++  + +     +   +AG GF+N +L+P++   IL+++   G  Y     G G K+
Sbjct: 70  AEAVLGELCLKGTYFTHAEVAGPGFLNFFLAPAWYTAILNAVQTEGEGYTHTAQGGGKKI 129

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+VSANPTGPMH+G+ R   +GD LA+++  +GY+VTRE+Y+NDAG QI   A+S+  
Sbjct: 130 MVEYVSANPTGPMHMGNARGGALGDCLAAVLEHAGYDVTREFYVNDAGNQIAKFAVSLEA 189

Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           RY Q     D+   PE  Y G  ++   KE A +Y  + L+ PE++   ++  + ++  +
Sbjct: 190 RYFQIFRGEDAVPFPEDGYHGDDVRERAKEFAAQYGKQYLDAPEDERRKVLAAFGIERNV 249

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K + DDL    I++D++  E   H  +   + D+I  L  +G  YE              
Sbjct: 250 KKLHDDLLKYRIEYDVWFRESVLH--EDGELADVIALLKERGAAYE-------------- 293

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
                 L + +T  G + D  L++++G  TYFAAD+AY + K+E RGF  ++ V G+DH 
Sbjct: 294 --KDGALWYAATRFGAEKDEVLVRANGIPTYFAADIAYHRNKFEKRGFAKVVDVWGADHH 351

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           G+V RL+    A+     +++V+L +LVRL R G  ++MSKR G  I+L  +++EV  D+
Sbjct: 352 GHVARLKGAMDAIGVGGDKLDVVLTQLVRLMRGGEVVRMSKRTGKAISLDDLLEEVPVDA 411

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF    R+ +  LDFD     EQS +NPV+YVQYA+AR  SI +           ++ P
Sbjct: 412 ARFFFNLREANSHLDFDLDLAVEQSSQNPVYYVQYAHARIWSILKNLAAE------NIHP 465

Query: 482 RNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           R   P+E      + E +LI HL   P  I+ A  A +P ++  Y+ DLA+ FH  ++  
Sbjct: 466 RACTPEEFGLLSASEERELIRHLGLLPNEIDEAAKAYDPARITRYVLDLATKFHKFYNAH 525

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   V+  +  L   RL L   V  ++   L+++ + +P  M
Sbjct: 526 Y-------VRGEDEPLMQARLNLCLCVRDVLKYVLDMLKITAPQTM 564


>gi|163854373|ref|YP_001628671.1| arginyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229558756|sp|A9HVX4|SYR_BORPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163258101|emb|CAP40400.1| argS [Bordetella petrii]
          Length = 561

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 181/569 (31%), Positives = 290/569 (50%), Gaps = 48/569 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID----PDVDSVFIAGK 86
           ++++ERP+  AHG ++TN AM L++P   +P  +A+ IV  +  +      V++  IAG 
Sbjct: 27  QVLLERPKVAAHGDVATNIAMQLAKPARRNPRELAQGIVDALMAETAARALVENAEIAGP 86

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN  ++ +  + ++ ++   G  YG      G KV +EFVSANPTGP+HVGH R A +
Sbjct: 87  GFINFRITAAARQAVIQAVAEQGEAYGHAPAT-GEKVLVEFVSANPTGPLHVGHARQAAL 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD +  L A +G +VTRE+Y NDAG QI  LA+SV  R +  +  +  D P   Y G Y+
Sbjct: 146 GDAICRLYAATGRDVTREFYYNDAGNQIQNLAVSVQARAR-GIAPDSPDYPADGYKGDYI 204

Query: 207 KHVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
             + ++      L     + +    +   L  ++ ++V  + +    DL+A  +  D + 
Sbjct: 205 VDIAQDFIARKTLQAADGAAVTASGDVDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYY 264

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--D 318
            E   +      +   +  L  +G+ YE                    L  R+T +G  D
Sbjct: 265 LESSLYT--SGRVEQTVQALVAKGHTYE----------------QDGALWLRTTELGTGD 306

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SE 376
           D DR + KS+G YTYF  D+AY K K+ERGF + + + GSDH G V R+ A   A+    
Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKAKWERGFRHAVNIQGSDHHGTVARVRAGLQALEEGI 366

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K     +L ++V++ R G  +K+SKRAG ++TLR ++D VG D+VR+ ++ R+      
Sbjct: 367 PKDYPAYVLHKMVKVMRGGEEVKISKRAGSYVTLRDLIDWVGRDAVRYFLIQRRADTEFV 426

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      +S ENPV+Y+QYA+AR  S+   A         D               +E 
Sbjct: 427 FDIDLALSKSDENPVYYIQYAHARICSMIANAG-------ADDARIAQADTALLTAPTEF 479

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  LA +P+++  A     P+ +AF+L D AS FH  ++  R       V  ++  L 
Sbjct: 480 ALMQRLASFPQIVAQAAQELAPHHIAFWLRDCASDFHAWYNAER-------VLVDDEPLK 532

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + RL+L      ++ +GL ++GV +P  M
Sbjct: 533 LARLRLAATTRQVLANGLALLGVSAPQRM 561


>gi|325124126|gb|ADY83649.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 596

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 190/629 (30%), Positives = 314/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWKNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKVLAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                                  +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGDGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A  +  DL FD+            D +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKA--VSTDLQFDVNTARPHAARLSLD-AET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           ++I  LA YP  +  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EIIAKLAAYPDAVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPESM 596


>gi|91790322|ref|YP_551274.1| arginyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|122967265|sp|Q123B6|SYR_POLSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91699547|gb|ABE46376.1| arginyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 561

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 183/591 (30%), Positives = 294/591 (49%), Gaps = 43/591 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                L + L +    +  +  +    V E P+  AHG  ++ AAM L++PL L+P  +A
Sbjct: 3   QIKQDLLDALGQALKTMAPDSGVAA--VFESPKVAAHGDFASTAAMQLAKPLKLNPRQVA 60

Query: 66  ELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           E +   +   P     VD++ IAG GF+N+ L P   ++++  ++    +YG  L     
Sbjct: 61  ENLRGLLLQAPAFARWVDAIEIAGPGFLNIRLKPEAKQQVVREVLQGADQYGMQLADSPH 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +EFVSANPTGP+HVGH R A +GD + +L    G++V RE+Y NDAG QI TLA S 
Sbjct: 121 RMVVEFVSANPTGPLHVGHGRQAALGDAICNLFDTQGWDVWREFYYNDAGVQIQTLATST 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDY 236
             R  + L   D+  PE  Y G Y+  +  +   K        E     + + +  ++ +
Sbjct: 181 QAR-AKGLKPGDAGWPEPAYNGDYIADIANDFLAKKTVKSDDREFTASGDVEDIDAIRQF 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V  +      DL+A +++ D +  E   +      +   +  L   G  YE        
Sbjct: 240 AVAYLRHEQDLDLRAFSVRFDNYYLESSLY--SSGRVDSAVQKLKDAGKTYE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L  +ST  GDD DR + K DGSYTYF  D+AY   K+ERGF   I + 
Sbjct: 290 --------QDGALWLKSTDYGDDKDRVMKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQ 341

Query: 357 GSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G DH G + R+ A   A      +   + +L  +VR+ R G  +K+SKRAG ++TLR ++
Sbjct: 342 GMDHHGTIARVRAGLQAASAGIPQGYPDYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLI 401

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +   +D+VRF +L RK      FD      ++ ENPV+YVQYA+AR  SI       +  
Sbjct: 402 EWTSADAVRFFLLSRKPDTEYVFDIDLALAKNNENPVYYVQYAHARICSIL----GTWAA 457

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
              D      +   +        L++ LA+YP ++ NA     P+ +AFYL +LA+ +H 
Sbjct: 458 QGGDASQLKSVDLSALDGPQAQALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHS 517

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++   R       +  ++  + + RL LV A A ++++GL ++GV +P++M
Sbjct: 518 YYDAER-------ILVDDEAIKLARLALVAATAQVLHNGLKVLGVSAPHKM 561


>gi|302872432|ref|YP_003841068.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575291|gb|ADL43082.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 561

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 197/592 (33%), Positives = 318/592 (53%), Gaps = 38/592 (6%)

Query: 1   MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M L         S ++N +K        E   +  I+IE+P++ +HG  +TN A+ L++ 
Sbjct: 1   MNLVKLAKEQVKSVIQNAIKRCIETGIFELDSIPDIMIEKPKEKSHGDFATNIALELTKK 60

Query: 57  LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
           L  +P  IA+ I+  I +     + V +AG GFIN +    +L K +  I+  G  YG+ 
Sbjct: 61  LRKNPREIAQHILNCIDLSETFIERVEVAGPGFINFFFKKEWLYKAVEVILSEGNNYGKV 120

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G KV +EFVSANPTGPMH+G+ R   +GD LA+L+ ++GY VT+E+Y+NDAG QI 
Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+  RY+Q L   + DLPE  Y G  +    KE  D++  +L N   ++    + D
Sbjct: 181 KFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++++  + ++++ L+   I++D++  E   +  +   + + I++L  +GY YE       
Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                        L F ++ +     D  L++++G  TYFAAD+AY + K+E RGFD +I
Sbjct: 291 ---------KDGALWFVASKIDKSLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH G+V R++A   A+     ++ V+L +LVRL R    ++MSKR G  ITL  +
Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +DE+G D+ RFM   +     ++ D   V +Q+ +NPVFYVQYA+AR   I R   +   
Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            LD       ++ QE E +  +  L +        IE A    +  ++  YL DLAS+FH
Sbjct: 462 VLDKSKIKVELLQQEEELELLKKLLELP-----EEIEIAAKNLDVSRVTKYLLDLASMFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  R       V+  N +L   RL LV  V  +IN+ L ++GV++P +M
Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVDAPEKM 561


>gi|260551329|ref|ZP_05825530.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405643|gb|EEW99134.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 596

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY--------SSELLNFPEE----- 227
            + RY + L  N    P+  Y G Y+K + + + DK         +    + PE+     
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQSIIDKDNNAYVRDVADVYKDVPEDVQYAE 237

Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                          +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ +++ + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       +      +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKATSTGLQFEVSAARSHAA---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP V+  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|241765029|ref|ZP_04763024.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241365387|gb|EER60186.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 561

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 179/574 (31%), Positives = 287/574 (50%), Gaps = 41/574 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD--- 79
           K+      +   E P+  +HG  +  AAM L++PL L+P  +AE +   +   P      
Sbjct: 18  KLSPGAGAKAAFESPKVASHGDFACTAAMQLAKPLKLNPRQVAENLRTALLATPVYQRWV 77

Query: 80  -SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
             + IAG GFIN+ L P+  ++I+  ++ +G  +G     +  +V +EFVSANPTGP+HV
Sbjct: 78  TEIEIAGPGFINIRLKPAAKQEIVREVLGAGARFGYR-PRRNARVLVEFVSANPTGPLHV 136

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A +GD ++ L    G++V RE+Y NDAG QI TLA S   R +      D++ PE
Sbjct: 137 GHGRQAALGDAISHLFDTQGWDVYREFYYNDAGVQIATLATSTQMRAR-GFKPGDAEWPE 195

Query: 199 GYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
             Y G Y+  +  +   K        E     +   L  ++ ++V  +      DLKA +
Sbjct: 196 AAYNGDYIADIAADFLAKKTVRSDDREFTASGDVNDLDGMRLFAVAYLRHEQDLDLKAFD 255

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++ D +  E   +      +  ++  L   G  YE                    L  +S
Sbjct: 256 VRFDNYYLESSLYT--SGKVDAVVQKLRDAGKTYEH----------------DGALWLKS 297

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           T  GDD DR + K DG YTYF  D+AY   K+ERGF  ++ + G+DH G + R+ A   A
Sbjct: 298 TEYGDDKDRVMRKGDGGYTYFVPDVAYHITKWERGFTKVVNIQGTDHHGTIARVRAGLQA 357

Query: 374 --VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             V   +   + +L  +VR+ R G  +K+SKRAG ++TLR +++    D+VRF +L RK 
Sbjct: 358 AGVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKP 417

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
                FD      Q+ +NPV+YVQYA+AR  S+ R  ++       D+     +   +  
Sbjct: 418 DTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWQEQGGG---DVAALKDVDLSALE 474

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
                 L++ LA+YP ++  A   + P+ + FYL DLA+ +H ++   R       +   
Sbjct: 475 GPQAQALMLQLAKYPDMLTAAAEGEAPHDVTFYLRDLAASYHSYYDAER-------ILVE 527

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  + + RL LV A A ++++GL ++GV +P  M
Sbjct: 528 DESVKLARLALVAATAQVLHNGLAVLGVSAPARM 561


>gi|207727725|ref|YP_002256119.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206590966|emb|CAQ56578.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 600

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 197/621 (31%), Positives = 300/621 (48%), Gaps = 69/621 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E      IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LSP+    +L+++   G  YG   +  G  V
Sbjct: 66  IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +  L   ++  PE  Y G Y+  +  +              +    + + L  ++ ++
Sbjct: 186 RAR-GLKPGEAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      +R  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVRQTVDALIAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A    +     K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDAEAEAGVDTIRACVESGAPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
           S ENPV+YVQYA+AR  S+F Q           L   ++      +     + L+  LA 
Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLTAVAGPDASPQAVALVQRLAA 526

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ 
Sbjct: 527 FPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL +IGV +P +M
Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600


>gi|269957251|ref|YP_003327040.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305932|gb|ACZ31482.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 566

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/570 (32%), Positives = 286/570 (50%), Gaps = 39/570 (6%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
              +   + +ERPR   HG  +TN A+ L++  G +P  +AE++ +R+     +  V IA
Sbjct: 27  PAAVPASVHVERPRQREHGDWATNVALQLAKKAGTNPRALAEVLASRLASVSGIKQVDIA 86

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GF+N+ L  +   ++  SIV +G  YG N    G  +N+EFVSANPTGP+H+G  R A
Sbjct: 87  GPGFLNITLDAAAAGELARSIVETGATYGHNQAEAGKHINLEFVSANPTGPLHIGGVRWA 146

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            VGD+LA ++  SG +VTREYY ND GAQI+  A S+    +          PE  Y G 
Sbjct: 147 AVGDSLARVLEASGAQVTREYYFNDHGAQIDRFARSLLAAAR------GEAAPEDGYGGS 200

Query: 205 YLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y++ +   +  +            P+ +     +   VQ M   ++  L    +  D+F 
Sbjct: 201 YIREIADAVTAQALAAGEPAPATLPDGEAQEAFRARGVQMMFAEVKTSLHDFGVDFDVFF 260

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            ED  H  +   +   +  L   G+++E                       R+T  GDD 
Sbjct: 261 HEDSLH--ESGAVERAVARLRELGHIFEA----------------DGATWLRTTDFGDDK 302

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA- 379
           DR ++K DG   Y A D+AY+  K ERG D  IY++G+DH GYV R+ A+ AA  +    
Sbjct: 303 DRVVIKRDGEAAYIAGDIAYYLDKRERGADEAIYMLGADHHGYVGRMMAICAAFGDTPGV 362

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            + +L+ +LV L +DG P++MSKRAG+ IT+  +VD VG D+ R+ +        +D D 
Sbjct: 363 TMQILIGQLVNLVKDGEPVRMSKRAGNIITIDDLVDAVGVDAARYSLARFAADSTIDLDL 422

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +  Q  ENPV+YVQYA++R  ++ R A +       D F  +++        +E  L+
Sbjct: 423 DLLTSQKNENPVYYVQYAHSRTAAVDRNAAERGV-ARADGFEPSLLDH-----PTEAVLL 476

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV----QANNRKL 555
             LAE+PRV+  A   +EP+++A YL  LA  +H  +     +   R V           
Sbjct: 477 GRLAEFPRVVGEAAALREPHRVARYLEALAGDYHSWYQAKDADGAQRRVLPYPDEPVTDT 536

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L  AV  ++ +GL ++GV +P  M
Sbjct: 537 HRTRLWLNDAVRQVLANGLGLLGVSAPERM 566


>gi|262380742|ref|ZP_06073895.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262297690|gb|EEY85606.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 596

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +  +  +   + R +D +HG  ++N AMI ++  G+ 
Sbjct: 1   MN--TAIQAALDHAVQSLQNQRVLPTEWTNSSSLTRTKDRSHGDFASNIAMIGAKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I     +YGR  +   
Sbjct: 59  PRDLAEKILANLPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQKDQYGRTQVNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--------PEE----- 227
            + RY + L   D   P+  Y G Y+K + + + D      ++         PE+     
Sbjct: 179 TYLRYLELL-GQDLVFPKNAYQGDYVKEIAQGIIDLKGKTYVHLVADVYKDVPEDVQYAA 237

Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                          +   +    +++A++  I+DDL    +  
Sbjct: 238 EPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEGYRVFHQAALKAILDDIKDDLGEFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE          I + +  L ++G++YE                    + F+ST  
Sbjct: 298 NEWFSEASL----TEKIDEALQTLGQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIEAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A      L+      +    E     +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASNGIVLNVSTARSHAPRLEL---DAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  LA YP ++  A    EP+++  YL +LA++FHG ++  +       V  ++ +LT
Sbjct: 515 ELLAKLAAYPDIVIRAANVYEPHQVGNYLKELAALFHGWYNEHK-------VLGDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSVNVQQVLRNGLELLGVSAPTTM 596


>gi|307728283|ref|YP_003905507.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307582818|gb|ADN56216.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 600

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 187/616 (30%), Positives = 304/616 (49%), Gaps = 61/616 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLADTVKQVALATQGATEAAFVSPTIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +    +    ++S  +AG GFINL L+ +  + ++++++     YGR+    
Sbjct: 69  LAQQIVDTLLAQPQAQGLIESAEVAGPGFINLRLAAAAKQAVVAAVLAEKDAYGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD L++++A  G++V RE+Y NDAG QI TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  P   Y G Y+  + K+              +    + + L  +
Sbjct: 189 STQARAR-GLAPGDAGWPASAYNGEYIADIAKDYLNGVTVCASDGEPVTGARDVENLDAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   +      +   ++ L   G  YE     
Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVEALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V YVQYA+AR  S+  + K     D   D      +          + L+  LAE+P ++
Sbjct: 470 VHYVQYAHARICSVIAECKSRYGADYGADESALANVDLAPLSSERAMALLNKLAEFPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++A     P+ +AFYL DLA  FH  ++   E      V  ++      R+ L+ A   +
Sbjct: 530 QHAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQV 584

Query: 570 INSGLNIIGVESPNEM 585
           + +GL +IGV +P +M
Sbjct: 585 LANGLAVIGVSAPVKM 600


>gi|121606589|ref|YP_983918.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166232820|sp|A1VTL9|SYR_POLNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120595558|gb|ABM38997.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 558

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 189/597 (31%), Positives = 299/597 (50%), Gaps = 52/597 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + +  D  S L   L+++           D+   E P+  AHG  +  AAM L++PL  +
Sbjct: 2   LSIKKDLLSALAIALEQLSPGAG------DKAAFESPKVAAHGDFACTAAMQLAKPLKQN 55

Query: 61  PLTIAELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           P   AE + AR+ + P     V+++ IAG GFIN+ L P+  ++ +  ++ +G +YG   
Sbjct: 56  PRQTAESLRARLLLAPAFERWVEAIEIAGPGFINIRLKPAAKQETVREVLQAGAQYGTQP 115

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EFVSANPTGP+HVGH R A +GD + +L A  G +V RE+Y NDAG QI+T
Sbjct: 116 TDHERKMIVEFVSANPTGPLHVGHGRQAALGDAICNLHATQGLDVWREFYYNDAGVQIHT 175

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLP 231
           LA S   R  + L   D++ PE  Y G Y+  + ++   K        E     + + + 
Sbjct: 176 LATSTQAR-AKGLKPGDANWPEPAYNGDYIDDIARDFLAKKTVKSDDREFTASGDVEDME 234

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            ++ ++V  +      DLKA +++ D +  E   +      +   +  L   G  YE   
Sbjct: 235 AIRQFAVAYLRHEQDLDLKAFSVKFDNYYLESSLY--SSGRVESTVQRLKDAGKTYE--- 289

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                            L  RST  GDD DR + KSDG++TYF  D+AY   K+ERGF  
Sbjct: 290 -------------QDGALWLRSTDYGDDKDRVMKKSDGTFTYFVPDVAYHLAKWERGFTK 336

Query: 352 MIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            + + G DH G + R+ A   A          + +L  +VR+ R G  +K+SKRAG ++T
Sbjct: 337 AVNIQGMDHHGTIARVRAGLQAANAGIPAGYPDYVLHTMVRVVRHGEEVKISKRAGSYVT 396

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQA 468
           LR +++   +D+VRF +L RK      FD      ++ ENPV+YVQYA+AR  SI     
Sbjct: 397 LRDLIEWTSADAVRFFLLSRKPDTEYIFDIDLALAKNNENPVYYVQYAHARICSILTAWG 456

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            D       DL P                L++ LA+Y  ++ +A     P+ +AFYL +L
Sbjct: 457 GDESQFGHVDLSPLA--------SPQAQALMLLLAKYTDMLSHAAAGFAPHDVAFYLREL 508

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ +H ++   R       +  ++  + + RL LV A A ++++GL ++GV +P +M
Sbjct: 509 AACYHSYYDAER-------ILVDDEAVKLARLALVAATAQVLHNGLAVLGVSAPRKM 558


>gi|68171671|ref|ZP_00545032.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998906|gb|EAM85597.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 576

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 245/587 (41%), Positives = 354/587 (60%), Gaps = 14/587 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M L     + +   L  +  K  I ++  IL +++++ P +  HG L TNAA+ILS  + 
Sbjct: 1   MNLINTVKNCIVEKLHILSDKKLIVLDDVILSKLIVDYPNNHNHGDLYTNAALILSSHIK 60

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
             PL IAE++++       + S+ +   GFIN  +S     ++++SI +    +    IG
Sbjct: 61  KSPLEIAEILLSEFSNIKGISSINVVKPGFINFSISLYVWYEVVASINMLKEGFANVNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+EFVSANPTGPMH+GH R A+ GD LA+L+   GY+V REYYINDAG QI+ L 
Sbjct: 121 NGQKVNVEFVSANPTGPMHIGHARGAIFGDVLANLLEKVGYQVVREYYINDAGTQIDVLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV+ RY++A    D  +  G YPG+YL+ +GK L +KY ++LL     + + I++D S+
Sbjct: 181 ESVYLRYKEA-TGQDIVIGSGLYPGLYLREIGKLLYEKYGTDLLEMSFVRKMKIIRDVSL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +M +I++DL  L I+HD+F SE +  + +   +   +  L  +  +Y G+L  PK   
Sbjct: 240 EYLMNLIKEDLALLGIEHDVFTSEAELLKNNI--VEKCVKLLEDKQLIYYGVLEQPKGTE 297

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            Q     R Q+LF+ST  GDDVDR L K DGS+TYFA D+AY   K  RGF +MI  +GS
Sbjct: 298 MQNWK-PRTQMLFKSTDFGDDVDRALQKVDGSWTYFANDIAYHFDKISRGFQHMILELGS 356

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRL+A   A+S   A +++ L   V    DG+ +KMSKR+G+F+T+R V+++VG
Sbjct: 357 DHIGYVKRLKAAVKALSNNNATVDIKLHNTVNFLDDGVQVKMSKRSGEFLTIRDVIEKVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML RK+  +LDFDF KV EQSK NP+FYVQYA+AR  S+ R A +I    D D
Sbjct: 417 KDVVRFMMLTRKSDVVLDFDFAKVVEQSKNNPIFYVQYAHARVCSLMRNAPNILGIEDTD 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +           E+ LI  LA++P V+E +    EP+++ FYL ++A  FH  W +
Sbjct: 477 FSVLS--------SKEEILLIKLLAKWPNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGY 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G +N   RF+  N+  LT  R+ L  +VA II+SGL I  +    EM
Sbjct: 529 GNKNANRRFIIDNDVNLTSARIYLAKSVAYIISSGLKIFSIVPLEEM 575


>gi|256833012|ref|YP_003161739.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686543|gb|ACV09436.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 558

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 187/588 (31%), Positives = 292/588 (49%), Gaps = 40/588 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + S+ L   L +      +      + D I +ERPR   HG  +TN A+ L++  G  P
Sbjct: 4   DELSTALHTALSDAVSAGAITLASSDVPDMIHVERPRQRDHGDWATNVALQLAKKAGQPP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A+ + AR++    +  V +AG GF+N+ L  +   ++  +IV +G EYGR+ +  G 
Sbjct: 64  RVLADALAARLQEQAGIARVDVAGPGFLNITLDTAAAGELARTIVEAGGEYGRSAVRAGR 123

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A VGD+LA ++  +G  V +EYY ND GAQI+  A S+
Sbjct: 124 TINLEFVSANPTGPIHIGGTRWAAVGDSLARILQATGAHVVKEYYFNDHGAQIDRFARSL 183

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLNFPEEKWLPIVKDYSV 238
               Q         +PE  Y G Y+  +      LA     ++L           +   V
Sbjct: 184 VASAQGL------PVPEDGYGGQYIHDIAQQVLALAAAEGIDVLGLDPADTQEFFRARGV 237

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I+  L    +  D++  E+  +  +   +   I  L   G+++E          
Sbjct: 238 ELMFGQIKQSLHDFGVDFDVYFHENHLY--ESGEVDKAIAKLRDNGHIFE---------- 285

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                        R+T  GDD DR ++KSDG   Y A D+AY+  K ERG D ++ ++G+
Sbjct: 286 ------QDGATWLRTTTFGDDKDRVVIKSDGDAAYIAGDIAYYLNKRERGSDEVVIMLGA 339

Query: 359 DHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ RL AV AA  +     + VL+ ++V L +DG P++MSKRAG  +TL  +VD V
Sbjct: 340 DHHGYIGRLMAVCAAFGDTPHTNLEVLIGQMVNLVKDGEPLRMSKRAGTVVTLEDLVDIV 399

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ +      + +D D   + + S +NPVFYVQYA+AR  ++ R A       D 
Sbjct: 400 GVDAARYALARSSVDQSIDIDLDVLAKASNDNPVFYVQYAHARTANVARNAAAAGVHRDD 459

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P       +    +E +LI  L EYPR++E A   +E +++A Y   LA  +H  +S
Sbjct: 460 AFDPA------TLSHPTETELIGRLTEYPRIVEQAAQLREQHRVARYAEALAGAYHKWYS 513

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P      A        RL L  A   ++ + L+++GV +P  M
Sbjct: 514 ECRVTPLS---GAEVTDTHRTRLWLNDATGQVLRNALSLLGVSAPERM 558


>gi|332875617|ref|ZP_08443429.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|332736190|gb|EGJ67205.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 596

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 185/629 (29%), Positives = 312/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D++   IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKILAVLPEVADINKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ +++ + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       +      +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP V+  A  A EP+++  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596


>gi|71909477|ref|YP_287064.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|109894985|sp|Q478Y7|SYR_DECAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71849098|gb|AAZ48594.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 587

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 197/621 (31%), Positives = 305/621 (49%), Gaps = 72/621 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  D  ++L   L++    +         I +ERPRD  HG  +TN AM L++ L  +P 
Sbjct: 1   MAQDVKTQLTALLQQALASVAPAATDTP-IHLERPRDPTHGDFATNLAMQLAKALKKNPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  ++A +     V    +AG GFIN  L   +   ++ +++  G  +GR+  G   K
Sbjct: 60  EIANQLLAELPPSRLVTKAEVAGAGFINFTLDAGFKTDVVKAVLAEGDNFGRSNQGGWQK 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G +L+SL+ F+G++VTREYY+NDAG Q++ L LS +
Sbjct: 120 VQVEFVSANPTGPLHVGHGRGAAYGASLSSLLTFAGWDVTREYYVNDAGRQMDILGLSTW 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----------FPEEKWLP 231
            RY +  +  D       Y G Y++ + K++   +  + +             PE +   
Sbjct: 180 LRYLEQ-HGVDVPFLPNAYQGDYVRDMAKQMTVAHGDKFVRPAADVLAGTPGLPEAERAD 238

Query: 232 ---------------------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                                       V  +++   +   RDDL+   +  D++ SE  
Sbjct: 239 DEAKRQRDLHLDALIANAKVLLGPDWTYVHQHALSEQLADGRDDLEEFGVHFDVWFSEQA 298

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
               D   +   +D L + G++Y                +      F+ST  GD+ DR +
Sbjct: 299 LF--DTGLVARCVDLLEKNGHLY----------------VQNGARWFKSTTFGDEKDRVV 340

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            + +G YTYFA+D+AY   K+ERGFD +I + G+DH GY+ R+     A+    +++ V 
Sbjct: 341 QRENGLYTYFASDIAYHLNKFERGFDKVINIWGADHHGYIARVNGAITALGLDASKLQVA 400

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L +   LYR+G    MS R+G+F+TLR +  EVG+D+ RF    RK+ + LDFD    K 
Sbjct: 401 LVQFAVLYRNGQKASMSTRSGEFVTLRELRGEVGNDACRFFYALRKSDQHLDFDLDLAKS 460

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q+ ENPV+Y+QYA+AR  S+  Q          DL            +  EL +   LAE
Sbjct: 461 QTNENPVYYIQYAHARVCSVINQWG-------GDLATLADANLALLDNPRELAIASKLAE 513

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  VI+ A     P+ +AFYL DLA  FHG ++  R       +  ++  L   R+ L  
Sbjct: 514 FRDVIDGAARELAPHLIAFYLKDLAGEFHGWYNAER-------MLVDDAALRDARVALAA 566

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV   I +G+ I+GV  P+ M
Sbjct: 567 AVRQTIRNGMTILGVSCPDSM 587


>gi|170691609|ref|ZP_02882774.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143814|gb|EDT11977.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 596

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 189/615 (30%), Positives = 307/615 (49%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLADTVKQVALATQGATEAAFVSPTIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +    +    ++S  +AG GFINL L+ +  + ++ +++     YGR+    
Sbjct: 69  LAQQIVDTLLAQPQAQGLIESAEVAGPGFINLRLAAAAKQAVVKAVLAEKDVYGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD L++++A  G++V RE+Y NDAG QI TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  P   Y G Y+  + K+              +    + + L  +
Sbjct: 189 STQARAR-GLAPGDAGWPASAYNGEYIADIAKDYLNGVTVSASDGEPVTGARDVENLDAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   +      +   +  L   G  YE     
Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVQALITAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------REGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGALPGTEAAVDQIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+  + K  +   +  L   ++ P  SE     + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVIAECKTRYGADESTLDSVDLAPLSSE---RSMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++   E      V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDRAER-----VLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL IIGV +P +M
Sbjct: 582 ANGLAIIGVSAPVKM 596


>gi|255320625|ref|ZP_05361802.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302241|gb|EET81481.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 596

 Score =  521 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 185/629 (29%), Positives = 310/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +     +  +   + R +D +HG  ++N AMI ++  G+ 
Sbjct: 1   MN--TAIQAALDHAVQSLQNQGVFPTEWTNSSSLTRTKDRSHGDFASNIAMIGAKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I     +YGR  +   
Sbjct: 59  PRDLAEKILANLPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQKDQYGRTQVNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEE----- 227
            + RY + L   D   P+  Y G Y+K + + + D      +        + PE+     
Sbjct: 179 TYLRYLELL-GQDLVFPKNAYQGDYVKEIAQGIIDLKGEAYVHPVADVYKDVPEDVQYAA 237

Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                          +   +    +++A++  I+DDL    +  
Sbjct: 238 EPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEGYRVFHQAALKAILDDIKDDLGEFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE          I + +  L ++G++YE                    + F+ST  
Sbjct: 298 NEWFSEASL----TEKIDEALQTLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIEAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A      L+      +    E     +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASNGIVLNVSTARSHAPRLEL---DAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  LA YP ++  A    EP+++  YL +LA++FHG ++  +       V  N+ +LT
Sbjct: 515 ELLAKLAAYPDIVIRAANVYEPHQVGNYLKELAALFHGWYNEHK-------VLGNDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSVNVQQVLRNGLELLGVSAPTTM 596


>gi|17545006|ref|NP_518408.1| arginyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|39932229|sp|Q8Y2P8|SYR_RALSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17427296|emb|CAD13815.1| probable arginyl-trna synthetase (arginine--trna ligase) (argrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 600

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 195/621 (31%), Positives = 299/621 (48%), Gaps = 69/621 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L +    +  E      IV+ERP+  AHG ++ N A+ L++PLG +P  +A  
Sbjct: 6   KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I   I+ D      V +V IAG GFINL LSP+    +L+++   G  YG   +  G  V
Sbjct: 66  IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLAAVFAEGDRYGAADLHDGAPV 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV  
Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237
           R +      D+  PE  Y G Y+  +  +              +    + + +  ++ ++
Sbjct: 186 RAR-GFKPGDTGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENIEAIRRFA 244

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  +      DL+A  ++ D +  E   +      ++  +D L   G  YE         
Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVQQTVDALIAAGKTYE--------- 293

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ RGF  +I V G
Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346

Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           SDH G + R+ A      +   K   + +L ++V + +DG  +K+SKRAG ++T+R +++
Sbjct: 347 SDHHGTIARVRAGLQGLDLGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406

Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                           G D+VRF +L RK      FD     +Q
Sbjct: 407 WSNGDAESEAGVDTIRACVESGAPNWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
           S ENPV+YVQYA+AR  S+F Q           L   ++      E     + L+  +A 
Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDAASLAGADLAAVAGPEASPQAVALVQRIAA 526

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ 
Sbjct: 527 FPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL +IGV +P +M
Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600


>gi|299771958|ref|YP_003733984.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298702046|gb|ADI92611.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 596

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 186/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWKNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKVLAALPEVTDISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTIIDKDGDAYLREVADVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       D +    +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTNLPFDVNTARPHAA---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP  +  A  A EP++L  YL +LA++FHG ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDAVLRAANAYEPHQLGNYLKELAALFHGWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPESM 596


>gi|332286305|ref|YP_004418216.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430258|gb|AEC21592.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 561

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 183/577 (31%), Positives = 295/577 (51%), Gaps = 48/577 (8%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78
           K+  +    +++ERP+  AHG ++ N AM L++P   +P  +A+ IV  +  +P     +
Sbjct: 19  KIVPEATATVLLERPKVAAHGDIACNIAMQLAKPARRNPRELAQNIVDALLAEPATQALI 78

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            S  IAG GFIN  L+ +    +L +I   G  YG     +  K+ +EFVSANPTGP+HV
Sbjct: 79  SSAEIAGPGFINFRLATAARHAVLDAIAQEGARYGHLSANQ-QKLMVEFVSANPTGPLHV 137

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GH R A +GD++  L    GY+VTRE+Y NDAG QI+ LA+SV  R +  +  + SD P 
Sbjct: 138 GHSRQAALGDSICRLFTSQGYDVTREFYYNDAGNQIDNLAISVQARAR-GIEPDASDFPA 196

Query: 199 GYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             Y G Y+  + ++              +        L  ++ ++V  + +    DL+A 
Sbjct: 197 DGYKGDYIVDIARDFQAGATVTGTDGVSVTATGNIGSLDDIRVFAVAYLRREQDLDLQAF 256

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            ++ D +  E   +      +   +  L   G+ YE                    L  R
Sbjct: 257 GLKFDNYYLESSLYT--TGRVEQTVKALIDAGHTYEN----------------EGALWLR 298

Query: 313 STMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           +T +G  DD DR + KS+G YTYF  D+AY   K+ERGF + I + G+DH G + R+ A 
Sbjct: 299 TTELGTGDDKDRVMRKSEGGYTYFVPDVAYHVAKWERGFHHAINIQGTDHHGTIARVRAG 358

Query: 371 AAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              +     K     +L ++V++ R+G  +K+SKRAG ++T+R ++D VG D+VR+ +  
Sbjct: 359 LQGLNLGIPKDFPAYILHKMVKVVRNGAEVKISKRAGSYVTMRDLIDWVGQDAVRYFLSQ 418

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R+      FD      +S+ENPV+Y+QYA+AR  S+  Q+ ++   +          P  
Sbjct: 419 RRADSEFVFDIDLALSKSEENPVYYIQYAHARICSMLTQSAELAAQVPQADVSLLTAPT- 477

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                 E  L+  L+EYP ++  AT    P+ LAF+L D A+ FH  ++  R       V
Sbjct: 478 ------EFALLQRLSEYPAMLALATQELAPHHLAFWLRDCAADFHAWYNAER-------V 524

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++ +L + RL+L HA   ++ +GL ++GV +P  M
Sbjct: 525 LVDDSQLKLARLRLAHATGQVVANGLELLGVSAPERM 561


>gi|296160343|ref|ZP_06843160.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889324|gb|EFG69125.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 596

 Score =  521 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 192/615 (31%), Positives = 308/615 (50%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLADTVKQVALASQGATEAAFVSPTITLERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +   P     V++  +AG GFINL L+ +  + +++++      +GR+    
Sbjct: 69  LAQQIVDALLAQPGARDLVEAAEVAGPGFINLRLTAAAKQAVIAAVFAEKERFGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD L++++A  G++V RE+Y NDAG QI TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIQTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D   P   Y G Y+  + K+       A      +    + + L  +
Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGVTVAASDGEPVTGARDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   ++     +   +  L   G  YE     
Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVAALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++         EV            G D+VRF +  RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEVDVDLIDEETIRRGRDAVRFFLTSRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+  + K  +   +  L   +V P  SE     + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVIAECKARYNTDESTLADVDVTPLTSE---RAMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++   E      V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL  IGV +P +M
Sbjct: 582 ANGLATIGVSAPVKM 596


>gi|88657836|ref|YP_507350.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|109894990|sp|Q2GGT3|SYR_EHRCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88599293|gb|ABD44762.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 576

 Score =  521 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 245/587 (41%), Positives = 355/587 (60%), Gaps = 14/587 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M L     + +   L  +  K  I ++  IL +++++ P +  HG L TNAA+ILS  + 
Sbjct: 1   MNLINTVKNCIVEKLHILSDKKLIVLDDVILSKLIVDYPNNHNHGDLYTNAALILSSHIK 60

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
             PL IAE++++      ++ S+ +   GFIN  +S     ++++SI +    +    IG
Sbjct: 61  KSPLEIAEILLSEFSNIKEISSINVVKPGFINFSISLYVWYEVVASINMLKEGFANVNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVN+EFVSANPTGPMH+GH R A+ GD LA+L+   GY+V REYYINDAG QI+ L 
Sbjct: 121 NGQKVNVEFVSANPTGPMHIGHARGAIFGDVLANLLEKVGYQVVREYYINDAGTQIDVLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV+ RY++A    D  +  G YPG+YL+ +GK L +KY ++LL     + + I++D S+
Sbjct: 181 ESVYLRYKEA-TGQDIVIGSGLYPGLYLREIGKLLYEKYGTDLLEMSFVRKMKIIRDVSL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +M +I++DL  L I+HD+F SE +  + +   +   +  L  +  +Y G+L  PK   
Sbjct: 240 EYLMNLIKEDLALLGIEHDVFTSEAELLKNNI--VEKCVKLLEDKQLIYYGVLEQPKGTE 297

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            Q     R Q+LF+ST  GDDVDR L K DGS+TYFA D+AY   K  RGF +MI  +GS
Sbjct: 298 MQNWK-PRTQMLFKSTDFGDDVDRALQKVDGSWTYFANDIAYHFDKISRGFQHMILELGS 356

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRL+A   A+S   A +++ L   V    DG+ +KMSKR+G+F+T+R V+++VG
Sbjct: 357 DHIGYVKRLKAAVKALSNNNATVDIKLHNTVNFLDDGVQVKMSKRSGEFLTIRDVIEKVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRFMML RK+  +LDFDF KV EQSK NP+FYVQYA+AR  S+ R A +I    D D
Sbjct: 417 KDVVRFMMLTRKSDVVLDFDFAKVVEQSKNNPIFYVQYAHARVCSLMRNAPNILGIEDTD 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +           E+ LI  LA++P V+E +    EP+++ FYL ++A  FH  W +
Sbjct: 477 FSVLS--------SKEEILLIKLLAKWPNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGY 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G +N   RF+  N+  LT  R+ L  +VA II+SGL I  +    EM
Sbjct: 529 GNKNANRRFIIDNDVNLTSARIYLAKSVAYIISSGLKIFSIVPLEEM 575


>gi|154501138|ref|ZP_02039176.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC
           29799]
 gi|150269830|gb|EDM97365.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC
           29799]
          Length = 582

 Score =  521 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 179/587 (30%), Positives = 313/587 (53%), Gaps = 20/587 (3%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
              +S  +   ++   +  +      +  IE P+D +HG  +++ AM  ++ L + P  I
Sbjct: 10  DQVASLTQAAYEKAAAEGLLPAGAQVKATIEIPKDVSHGDYASSFAMAGAKALHMAPRAI 69

Query: 65  AELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           A++I+  ++++     S  IAG GF+N  L   +  ++++ I   G+ YG    G G KV
Sbjct: 70  AQIILDHLELEGTYFQSAEIAGPGFLNFRLGSRWYGEVIADIEREGMTYGAVDEGHGEKV 129

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGPMH+G+ R  V+GD+LAS++  +GY+V RE+Y+NDAG QI+  ALS+  
Sbjct: 130 MVEFVSANPTGPMHIGNARGGVLGDSLASVLERAGYDVWREFYVNDAGNQIHKFALSIDT 189

Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           RY+Q +   ++   PE  Y G  +K +      ++    ++  EE+    + ++ ++  +
Sbjct: 190 RYRQLILGEENVPFPEDCYQGDDIKELAAAFRAEHGDSWVDKSEEERQEAMANFGLKRNI 249

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQ 300
             +++DL+   I+++ +  E   H  +   + + +  L+ +G+ YE  G L    ++  +
Sbjct: 250 PKMQEDLRRYKIEYNEWFLESTLH--NSGYVAETVGMLSDKGWTYEKDGALWLNTTELLK 307

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
           +  M   +   +   + D  D  L +++G YTYFAAD+AY + K E RGF   I + G+D
Sbjct: 308 EKYMREGKTREQVDKL-DLKDDVLRRANGFYTYFAADIAYHRNKLEKRGFQTAINIWGAD 366

Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H G+V RL+A    +      ++ V+L +LV L +DG P++MSKR+G  I LR ++DEV 
Sbjct: 367 HHGHVARLQAALDGLGLDGSHRLVVVLMQLVNLLQDGKPVRMSKRSGKAIALRDLLDEVS 426

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+    R  +  LDFD     ++  +NPV+YVQYA+AR  S+  + K+     +  
Sbjct: 427 VDACRYFFNSRSFTSPLDFDLDLAVKEDSDNPVYYVQYAHARICSLVARMKEE----EAS 482

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +   + I         EL L+  L+ +P  I  A+   +P  +  YL  LA  FH  ++ 
Sbjct: 483 VSAASAIDASVFSTPEELALVKTLSLFPEEIRLASRDYDPSHINRYLLTLAGDFHRFYNA 542

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       ++     +   RL+L   V S++ +G+ +IGV +P +M
Sbjct: 543 CR-------IKGEEEHVLAARLKLADTVRSVLANGMALIGVTAPEKM 582


>gi|187479831|ref|YP_787856.1| arginyl-tRNA synthetase [Bordetella avium 197N]
 gi|109894974|sp|Q2KTN9|SYR_BORA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115424418|emb|CAJ50971.1| arginyl-tRNA synthetase [Bordetella avium 197N]
          Length = 561

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 189/592 (31%), Positives = 297/592 (50%), Gaps = 50/592 (8%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              L + L      I  E      I++ERP+  AHG ++TN AM L++P   +P  +A+ 
Sbjct: 6   QQHLISLLARAVAGILPEAS--PDILLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQG 63

Query: 68  IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IV  +  DP     VDS  IAG GFINL  +    + +++++   G  +GR    +  KV
Sbjct: 64  IVDALLADPQARAIVDSAEIAGPGFINLRFTAQARQAVVAAVSAQGAAFGR-AARRDEKV 122

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD +  L   SG++VTRE+Y NDAG QI  LA+SV  
Sbjct: 123 LVEFVSANPTGPLHVGHARQAALGDAICRLFDASGWDVTREFYYNDAGNQIQNLAISVQA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW------LPIVKDYS 237
           R +  +  +  + P   Y G Y+  + ++   + S +  +    +       L  ++ ++
Sbjct: 183 RAR-GIGPDAPEWPADGYKGDYIADIARDYLAQASVQAADGEPVQASGNIDDLEDIRAFA 241

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V  + +    DL+A  ++ D F  E   +      +   ++ L  +G+ YE         
Sbjct: 242 VAYLRREQDLDLQAFGLKFDNFFLESSLYT--SGRVERTVETLIAKGHTYE--------- 290

Query: 298 TTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                      L  R+T +G  DD DR + KS+G YTYF  D+AY   K+ERGF + I +
Sbjct: 291 -------QDGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHLAKWERGFHHAINI 343

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            GSDH G V R+ A    +     K     +L ++V++ R G  +K+SKRAG ++T+R +
Sbjct: 344 QGSDHHGTVARVRAGLQGLEEGIPKEFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDL 403

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++ VG D+VR+ ++ R+      FD      +S ENPV+Y+QYA+AR  S+   +     
Sbjct: 404 IEWVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICSMIASSG---- 459

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
               D               SE  L+  LAE+P V++ A     P+ +AF+L D AS FH
Sbjct: 460 ---LDDATIAAADAARLTAPSEFALMQRLAEFPNVVKLAAQELAPHHIAFWLRDCASDFH 516

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++  R       V  ++  L   RL+L      ++ +GL ++GV +   M
Sbjct: 517 GWYNAER-------VLVDDEGLKQARLRLAATTRQVLANGLALLGVTALERM 561


>gi|109894984|sp|Q4JUI1|SYR_CORJK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 556

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 181/585 (30%), Positives = 292/585 (49%), Gaps = 36/585 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           A+ S  +    +       ++  ++     +ERPR+  HG  +TN AM +++  G +P  
Sbjct: 4   AELSELITETARTTLDAHGLDSSVVPESATVERPRNPEHGDYATNIAMQVAKKAGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
               +   +     +D   +AG GFIN+ L+ +   KI+  I+  G  +G      G  +
Sbjct: 64  FGTWLAESLGAHEGIDEATVAGPGFINIRLAAAAQGKIVEDILTVGANFGHGDELAGAAI 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++   G +VTREYY ND GAQI+  A S+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLNARGAKVTREYYFNDHGAQIDRFARSLVA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y++ +  ++  + + +      ++   + +   V+ M  
Sbjct: 184 AAK------GEPTPEDGYGGDYIQDIASQIV-EANPDWQKLGADEAQELFRSQGVELMFA 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L     + D++  E+     +   +   I  +   G +YE               
Sbjct: 237 HIKRTLAEFGTEFDVYFHENSLF--ESGAVEAAIQKIKDNGNLYEA-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG+  Y A D+AY   K++RG +  IY++G+DH GY
Sbjct: 281 --DGAWWLRSTNFGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLCIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL A AAA+     Q+ VL+ +LV L +DG  ++MSKRAG  ITL  +V+ +G D+ R
Sbjct: 339 IARLRAAAAAMGYDPQQVEVLIGQLVNLVKDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + M+       LD D      +S +NPVFYVQYA+AR  S+ R+A+D+   +  +    +
Sbjct: 399 YAMIRSSVDSSLDIDMDLWASKSNDNPVFYVQYAHARLCSLARKAEDLG--VTREGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V++ A   +EP+++A Y   LA  FH  +   +  P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKTAAELREPHRVARYAESLAGTFHRFYDACQILP 511

Query: 544 RLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    +   A N+ L   RL L  A    + + L ++GV +P  M
Sbjct: 512 KPSDDEQTVAENKALFAARLSLAAASRQTLANALELLGVAAPERM 556


>gi|91781601|ref|YP_556807.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123359228|sp|Q146I4|SYR_BURXL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91685555|gb|ABE28755.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 596

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 192/615 (31%), Positives = 309/615 (50%), Gaps = 63/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L + +K++    +   +   +   I +ERP+  AHG ++ N AM L++PL  +P  
Sbjct: 9   LETLLADTVKQVALASQGASEAAFVSPTITLERPKVAAHGDVACNVAMQLAKPLRANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +A+ IV  +   P     V++  +AG GFINL L+ +  + +++++      +GR+    
Sbjct: 69  LAQQIVDALLAQPGARDLVEAAEVAGPGFINLRLTAAAKQAVIAAVFAEKERFGRSQRDA 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V IEFVSANPTGP+HVGH R A +GD L++++A  G++V RE+Y NDAG QI TLAL
Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIQTLAL 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D   P   Y G Y+  + K+       A      +    + + L  +
Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGATVAASDGEPVTGARDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DL+A  ++ D +  E   ++     +   +  L   G  YE     
Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVAALIAAGKTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409

Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++         EV            G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEVDVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V YVQYA+AR  S+  + K  +   +  L   +V P  SE     + L+  LAE+P +++
Sbjct: 470 VHYVQYAHARICSVIAECKARYNMDESTLADVDVTPLTSE---RAMALLNKLAEFPDMLQ 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL DLA  FH  ++   E      V  ++      R+ L+ A   ++
Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQVL 581

Query: 571 NSGLNIIGVESPNEM 585
            +GL  IGV +P +M
Sbjct: 582 ANGLATIGVSAPVKM 596


>gi|254251280|ref|ZP_04944598.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124893889|gb|EAY67769.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 593

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 198/616 (32%), Positives = 303/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VPPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL L+ +  + ++ ++   G  +G +   
Sbjct: 67  QLAEQIVAAVNAHPAAQGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAQGSAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    +   L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYMNCETVAAKDGEPVKGAGDVDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     +     + DL                  L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---EWQSRYNGDLAQLPHADLSQLTSAQAASLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LANGLAMLGVSAPAKM 593


>gi|139439094|ref|ZP_01772546.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC
           25986]
 gi|133775441|gb|EBA39261.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC
           25986]
          Length = 617

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 197/633 (31%), Positives = 312/633 (49%), Gaps = 74/633 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L        +    LD   IERP D +HG  ++  A+  ++     P  IAE
Sbjct: 5   IEELVRAALAAAQEAGDLSAFELDDCAIERPADTSHGEWTSTMALKSAKLAHCAPRKIAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IVA +  DP ++ V IAG GFIN YLS +    I       G+++ ++ +G G K  +E
Sbjct: 65  AIVAHMPEDPAIEKVEIAGPGFINFYLSVAVKNAIFGEAREKGMDFAKSNVGGGLKTQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANP GPMH+GH R A +GD+L  +M  +GY++ RE+YIND G+Q+NT   S+  RY 
Sbjct: 125 FVSANPVGPMHIGHGRWAALGDSLCRVMDHAGYDIQREFYINDHGSQMNTFGNSISTRYM 184

Query: 187 QA-------------------------LYNNDSDLPE--------------GYYPGVYLK 207
           Q                          + + + + PE                Y G Y+ 
Sbjct: 185 QLADIIAKQGVDIDEAHKLLIADRDAFVADENDEHPETHPYQDNFAETLGKDSYGGDYII 244

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               E       + +N   ++ +   ++     M+  +RD   A+N   D + SE   + 
Sbjct: 245 DEAAEFWRTDGDKWVNADPQERMESFRERGYVKMVDNMRDLCHAVNCDFDRWYSERSLYV 304

Query: 268 GD-------PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            D        S +    + L + GY+Y                     L FRST +GDD 
Sbjct: 305 KDTEGETAGTSAVDRAFEKLDKMGYLY----------------TKDGALWFRSTDLGDDK 348

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+KSDG YTYFA+D+AY   K++R  D++I + G+DH GY++R+  V  A+     +
Sbjct: 349 DRVLIKSDGEYTYFASDVAYHWDKFQR-VDHVIDIWGADHHGYIERVRCVCDALGY-PGK 406

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             VLL +LV L R+G P++MSKR G  +TL+ +VDEVGSD+ R+ ++ + +++++DFD  
Sbjct: 407 FEVLLGQLVNLLRNGKPVRMSKRKGTMVTLQELVDEVGSDAARYTLISKSSNQMVDFDIE 466

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--------SEFD 492
            VK++   NPV+YVQYA+AR  SI R+A D+ P+   ++  + V  +            D
Sbjct: 467 AVKKRDNSNPVYYVQYAHARVCSILRRAADVTPEQADEMGMKAVAAKAIGENVDYSLLTD 526

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +EL L   L E   +I +    + P++L  +  +LA  FH  ++  +  P     +  +
Sbjct: 527 PTELALSRKLNELTDLIASCARDRAPFRLTHFAEELAGDFHSFYAACQVLPSEG--RPVD 584

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L+  RL    AV   +   L ++GV +P +M
Sbjct: 585 PELSRARLAACDAVRVTLALVLTLVGVSAPEQM 617


>gi|221070006|ref|ZP_03546111.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220715029|gb|EED70397.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 571

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 176/569 (30%), Positives = 294/569 (51%), Gaps = 47/569 (8%)

Query: 35  ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGKGFIN 90
           E P+  AHG  +  AAM L++PL  +P  + E +   ++        VD++ IAG GF+N
Sbjct: 32  ENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGPGFLN 91

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L P+  ++++  ++    ++G     +G  + +EFVSANPTGP+HVGH R A +GD +
Sbjct: 92  IRLKPAAKQEVVREVLAQAEKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAIGDAI 150

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-------YNNDSDLPEGYYPG 203
           ++L +  G++V RE+Y NDAG QI+TL  S   R +           ++D+ L + +Y G
Sbjct: 151 SNLYSSQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSDNPLAKNFYNG 210

Query: 204 VYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
            Y+  + K   +K        E     + +    ++ ++V  +      DL+A N++ D 
Sbjct: 211 DYIADIAKAFLNKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNLKFDE 270

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           +  E   +  +   +   ++ L   G  YE                    L  RST  GD
Sbjct: 271 YYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRSTDYGD 312

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376
           D DR + K+DG YTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   A  V  
Sbjct: 313 DKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAADVGI 372

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D+VRF +L RK      
Sbjct: 373 PEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEYT 432

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      Q+ +NPV+YVQYA+AR +S+ R  ++        L   ++   E        
Sbjct: 433 FDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGVPALKDVDLSALEG---PQAQ 489

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ LA+YP ++  A     P+ + FYL DLAS +H ++   R       +  ++ K+ 
Sbjct: 490 ALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------ILVDDEKVK 542

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + RL LV A A ++++GL ++GV +P  M
Sbjct: 543 LARLALVAATAQVLHNGLAVLGVSAPERM 571


>gi|152980236|ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166232796|sp|A6SU56|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151280313|gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 195/609 (32%), Positives = 302/609 (49%), Gaps = 58/609 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A    RL    +     +     +   I +ERPRD +HG ++ N AM +++PL  +P 
Sbjct: 1   MLAAQKQRLTELFQAAVAPLVASTDLQPTITLERPRDPSHGDVACNLAMQIAKPLKKNPR 60

Query: 63  TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +A+ + A +  +P      ++  IAG GFINL L+ +  + ++ +++  G E+G++ +G
Sbjct: 61  EVAQALAAALLDNPANRDLIEAADIAGPGFINLRLTAASRQAVVKTVLQQGAEFGKSNLG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV IEFVSANPTGP+HVGH R   +GD ++SL    GY+VTRE+Y NDAG QI TLA
Sbjct: 121 NDKKVIIEFVSANPTGPLHVGHGRQGALGDAMSSLFQAQGYDVTREFYYNDAGVQIATLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPI 232
            SV  R  + L       PE  Y G Y++ +  +   K          +    +   +  
Sbjct: 181 TSVQAR-GKGLKPGVEGWPESAYNGDYIQDIANDFLAKKTVSASNGEPVTASGDINDIES 239

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ +SV  + +    DL+A  ++ D +  E   +      +   +D L +    YE    
Sbjct: 240 IRQFSVTYLRREQDLDLQAFGVKFDNYYLESSLYA--DGKVEKTVDALIKADKTYEL--- 294

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T   DD DR + KSDG+YTYF  D+AY   K++RGF   
Sbjct: 295 -------------DGALWLRTTDYRDDKDRVMKKSDGTYTYFVPDVAYHTVKWQRGFTQA 341

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I V GSDH G + R+ A   A+     +   + +L ++V + R+G  +K+SKRAG ++TL
Sbjct: 342 INVQGSDHHGTIARVRAGLQALDIGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401

Query: 411 RHVVD----EV----------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           R +++    EV          G D+VRF ++ RK      FD      Q  ENPV+YVQY
Sbjct: 402 RDLIEWSNGEVVDGEVRDLTRGRDAVRFFLISRKADTEFVFDVDIALTQGDENPVYYVQY 461

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  S+  Q        D D    + +         E  L+  LAEYP  ++ A    
Sbjct: 462 AHARICSVLAQW------TDGDEASLDKVDLSPLTAARETALLAKLAEYPETLQKALEEL 515

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+++AFYL DLA   H +++  R       V  ++  L M R+ L+ A   ++ +GL +
Sbjct: 516 GPHQVAFYLRDLAGELHSYYNAER-------VLVDDEALKMARIALMSATRQVLRNGLAL 568

Query: 577 IGVESPNEM 585
           IGV +P  M
Sbjct: 569 IGVSAPARM 577


>gi|325521346|gb|EGD00194.1| arginyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 593

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 195/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VAPTITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +         V++  IAG GFINL L+ +  + ++++++  G  +G +   
Sbjct: 67  QLAEKIVAELTARPDAQGLVEAAEIAGPGFINLRLTAAAKQAVVTAVLAQGRAFGTSERE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    + + L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + ++                  L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVEVAQLPGADLSQLTSPQAASLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAMLGVSAPAKM 593


>gi|108804495|ref|YP_644432.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765738|gb|ABG04620.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 543

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 194/581 (33%), Positives = 300/581 (51%), Gaps = 42/581 (7%)

Query: 7   FSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           F  RL   ++  +     +E   LD + +ERP D  HG  +TN A+  +R    +P  +A
Sbjct: 3   FEGRLAEAVRGAVREAYGLE---LDGVHVERPNDPRHGDFATNVALANARTFRRNPRQVA 59

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +  R++  P V  V +AG GFIN  L+P  + + + +IV  G  YGR +   G  +N+
Sbjct: 60  EELAGRLRA-PFVREVEVAGPGFINFRLAPEAVWEEIGAIVREGTGYGR-VPPSGDPINV 117

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+HV H R A  GD LA ++  +G  V+REYY ND G QI     SV  RY
Sbjct: 118 EFVSANPTGPLHVAHGRHAAYGDALARILEAAGRRVSREYYFNDGGNQIRLFGESVADRY 177

Query: 186 QQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +          P+  Y G Y + + ++L++ + + LL    E+ L I+ D++ +  M+ 
Sbjct: 178 ARLYGRAWPVSDPDALYKGDYTEEIARDLSEAHGASLLEMEPEEALRIIGDFAARWCMED 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+  L+   +  D + +E   +  +   +++ I+ L   G  YE                
Sbjct: 238 IKRTLERARVGFDTYFNEKSLY--ESGAVQETIERLREAGCAYE---------------- 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L   S+  GDD DR L+KSDGSYTY A D+AY   K+ RGF   I ++G+DH+GY 
Sbjct: 280 KDGALWLASSRFGDDKDRVLVKSDGSYTYVAPDIAYHLDKWSRGFRRAINILGADHAGYG 339

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL A   A+   +  ++V L  LV+L R+G  +K SKRAG+ +T   ++DEVG D  R+
Sbjct: 340 TRLRAGLVALGLPEDFLDVELVRLVKLLREGRQVKFSKRAGNIVTFDELLDEVGVDVARY 399

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             +   +   ++FD      QS+ENPV+YVQYA+AR  SIFR+A +   +          
Sbjct: 400 FYVRSSHRNEMNFDLDLAIRQSEENPVYYVQYAHARICSIFRRAGEEAGEE--------- 450

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                E    E  L + L ++PRV+  A   +E + +  +L  +A+ FH  ++  R    
Sbjct: 451 -VPPGELAPEERLLALELIDFPRVVRGAADRREVHPVPAHLETVATRFHQFYTVHR---- 505

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V   + ++   RL L  A  +I+ +GL ++GV +P  M
Sbjct: 506 ---VLVEDGEVRARRLALCAATRNILAAGLGLLGVRAPERM 543


>gi|237755374|ref|ZP_04584002.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692458|gb|EEP61438.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 553

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 210/584 (35%), Positives = 334/584 (57%), Gaps = 32/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  +   ++ N LK+ +    + + + D+I IE P++   G LSTNAA ILS+ L   P 
Sbjct: 1   MKQEIRDKILNILKQNNL---LFEGVEDKIKIESPKEEKFGDLSTNAAFILSKNLNKKPF 57

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  +    + DP  + V +AG GFINL++S ++  +IL+  +    E+G+       K
Sbjct: 58  EVANQLKELFEKDPYFEKVEVAGGGFINLFISDAFYHQILNKAIEEKDEFGKAKEKNKGK 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +NIE+VSANPTGP+H+GH R AVVG+ L++L  + GY+V RE+YINDAG QI  L +SV+
Sbjct: 118 INIEYVSANPTGPLHLGHGRGAVVGNILSNLYDYIGYKVEREFYINDAGNQIKKLGMSVY 177

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAM 241
            R++Q +       PE  Y G Y+K + KE+      ++L+F  EE+ +    +Y+   +
Sbjct: 178 ARFRQ-IEEPSYPFPEDGYHGEYIKDIAKEIYHYEREKILSFLDEEEAIEFCAEYAKNFL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I+ DLK + ++ DI+ SE   ++     +   +  L  +G +YE             
Sbjct: 237 LDEIKKDLKLIGVEFDIWYSERHLYQH--GKVEQALKFLESKGLIYE------------- 281

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++++ GD+ DR + KSDGSYTYFAAD+AY   KY R +D +I V G+DH 
Sbjct: 282 ---KDGALWLKTSLYGDEKDRVIRKSDGSYTYFAADIAYHYDKYLRNYDFIINVWGADHH 338

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY  RL+A   A   K+  INVL  +LV+L+++G  +KMSKR+GDFITLR +V+EVG D+
Sbjct: 339 GYFPRLKAAIMAFGVKEDWINVLFIQLVKLFKNGEEVKMSKRSGDFITLRELVEEVGKDA 398

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V +    +  +  L+FD     ++S ENPVFYVQYA+AR  S+FR+A+  F     + F 
Sbjct: 399 VIYFFASKDPNTHLNFDIDIALKKSNENPVFYVQYAHARISSVFREAQQRFNFNPEEDFE 458

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            ++   + +    E  L+ +++  P  I +ATI  +P+K+    Y+LAS  H ++ +   
Sbjct: 459 ADLSLLKEDL---ERSLMKYISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH-- 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +F+  N+ KL   RL L+ AV +++ +   I+G+     M
Sbjct: 514 ----KFLIENDEKLMKARLYLLKAVRNVLRTLFKIMGITPVERM 553


>gi|225848845|ref|YP_002729009.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643540|gb|ACN98590.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 552

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 209/581 (35%), Positives = 327/581 (56%), Gaps = 31/581 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
               ++  + EI  K ++   +I D+I +E P++ + G L+TN A +L++ L   P  IA
Sbjct: 1   MKKEVREKIVEILKKEELFYPEIEDKIKVEPPKEESFGDLATNVAFLLTKHLKQKPQDIA 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I + ++ DP    V +   GFINL+LS SY   ++   V  G  +G N      K+NI
Sbjct: 61  EKIKSLLEKDPTFSKVEVLN-GFINLFLSDSYYHSVVKKAVEEGDSFGENKEKNRGKINI 119

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+H+GH R AVVG+ L+++ ++ GY+V RE+YINDAG QI  L  SV+ R+
Sbjct: 120 EYVSANPTGPLHLGHGRGAVVGNLLSNMYSYIGYKVEREFYINDAGNQIKKLGQSVYARF 179

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKI 244
           +Q +   D   PE  Y G Y+K + KE+      ++L+   EE  +    +Y+   ++  
Sbjct: 180 RQ-IEEPDFPFPEDGYHGEYIKDIAKEIYHYEREKILSMLSEEDAVEFCAEYAKNYLLDK 238

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++DLK +N+  DI+ SE   ++     +   +  L  +G +YE                
Sbjct: 239 IKEDLKLINVDFDIWTSEKSLYQH--GKVDQALKFLEEKGMIYE---------------- 280

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L  ++++ GD+ DR + KSDGSYTYFAAD+AY   KYERG+D +I V G+DH GY 
Sbjct: 281 KDGALWLKTSLYGDEKDRVIKKSDGSYTYFAADIAYHYDKYERGYDFIINVWGADHHGYF 340

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            RL+A   A   ++  INV+  +LV+L+++G  +KMSKR+GDFITLR +V+EVG D+V +
Sbjct: 341 PRLKAAVMAFGVREDWINVVFIQLVKLFKNGEEVKMSKRSGDFITLRELVEEVGKDAVIY 400

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
               +  +  L+FD      +S ENPV+YVQYA+AR  S+FR+AK+ F   +FD      
Sbjct: 401 FFASKDPNTHLNFDIDVALAKSNENPVYYVQYAHARISSVFREAKERF---NFDPEKDFE 457

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                     E  ++  L+  P+ IE AT+ +EP+K+    Y+LAS  H ++        
Sbjct: 458 ADLSLLTQEEEKSIMKFLSNLPQEIEEATLKKEPHKITSLTYELASKLHKYYYQH----- 512

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +F+   + KL   RL L+ A+ + + +   ++G+     M
Sbjct: 513 -KFLIETDEKLMKARLYLLKAIRNALRTLFKLMGITPVERM 552


>gi|302335535|ref|YP_003800742.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319375|gb|ADK67862.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 614

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 186/629 (29%), Positives = 310/629 (49%), Gaps = 69/629 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +K  +        + +  ++   +ERP D ++G  S+  AM  +R   + P  IA+
Sbjct: 5   IEELVKQAIAAAQSAGALPEFEIEDYGLERPADTSNGDWSSTVAMRSARLARMAPAKIAK 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  DP +  V +AG GFIN YLS S   ++  ++  +G ++G++ +G G KVN E
Sbjct: 65  AIVDNMPPDPAITRVEVAGPGFINFYLSTSAHNEVFRTVREAGSDWGKSNVGDGLKVNYE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F+SANPTGP+HVGH R A +GD++ ++   + ++VTREYYIND G+Q++    SV  RY 
Sbjct: 125 FISANPTGPLHVGHGRWAALGDSMCNVFEHTNHKVTREYYINDHGSQMDVFGRSVAMRYL 184

Query: 187 QA-------------------------LYNNDSDLPEGY--------------YPGVYLK 207
           Q                          + +   + PE +              Y G Y+ 
Sbjct: 185 QLDQAIKAEGFGLEDAVRLLLQDRESYVDDEQDEHPELHPYMDAFNEVLGGNSYGGDYII 244

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +E  +    + ++   E+  P  ++ + QAM++ I+     +    D++ SE   +R
Sbjct: 245 QIAREFYEADGDKWVSAEPEERDPEFRERAYQAMLRRIKATCHTVRCDFDLWFSERSLYR 304

Query: 268 GDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            D      +      L   GY+Y+                D   L F+ST  GDD DR L
Sbjct: 305 KDTDGTSQVDRAFRRLDEMGYLYK---------------TDDGALWFKSTAFGDDKDRVL 349

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KS+G YTYFA+D+AY   K++R  +  I + G+DH GY+ R+  V  A+     +  V 
Sbjct: 350 VKSNGEYTYFASDVAYHWNKFQRD-EYSIDLWGADHHGYIARVTNVCDALGY-PGKFEVD 407

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L RDG P++MSKR G  ++   ++ EVG D+ R+ ++ R +++ +DFD   VK+
Sbjct: 408 LGQFVNLLRDGEPVRMSKRKGTMVSFDELIAEVGVDATRYTLISRSSNQTIDFDIEAVKQ 467

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI--------PQESEFDTSEL 496
           +   NPV+YVQYA+AR  SI R+A  +  D   ++    V               D +E 
Sbjct: 468 KDNANPVYYVQYAHARICSILRKAAGVGEDEAVEMGMDEVAKRAIGPAYDLSLLTDATEA 527

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L   L+E+P ++      + P+++  +  +LA+ FHG ++  +  P     +  + +L+
Sbjct: 528 SLARKLSEFPELVAGCARDRAPFRITHFCEELAAAFHGFYASCQVLPSEG--RPVDAELS 585

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL    AV   +   L +IGV +P+ M
Sbjct: 586 RARLAACDAVRVNLEVALRLIGVSAPDVM 614


>gi|264680676|ref|YP_003280586.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262211192|gb|ACY35290.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 569

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 176/573 (30%), Positives = 294/573 (51%), Gaps = 47/573 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGK 86
           R   E P+  AHG  +  AAM L++PL  +P  + E +   ++        VD++ IAG 
Sbjct: 26  RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L P+  ++++  ++    ++G     +G  + +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKPAAKQEVVREVLAQAEKFGYQT-DRGENILVEFVSANPTGPLHVGHGRQAAI 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-------YNNDSDLPEG 199
           GD +++L +  G++V RE+Y NDAG QI+TL  S   R +           ++++ L + 
Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204

Query: 200 YYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y+  + K    K        E     + +    ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +  E   +  +   +   ++ L   G  YE                    L  RST
Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373
             GDD DR + K+DG YTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   A 
Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V   +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD      Q+ +NPV+YVQYA+AR +S+ R  ++        L   ++   E    
Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                L++ LA+YP ++  A     P+ + FYL DLAS +H ++   R       +  ++
Sbjct: 484 PQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------ILVDD 536

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            K+ + RL LV A A ++++GL ++GV +P  M
Sbjct: 537 EKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569


>gi|227503835|ref|ZP_03933884.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199659|gb|EEI79707.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 553

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 181/586 (30%), Positives = 295/586 (50%), Gaps = 34/586 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M    D S  +K     +  + +++  +L   + +ERPR+  HG  +TN A+ +++  G+
Sbjct: 1   MNPV-DLSVLIKETAVAVLSEHELDTAVLPETVTVERPRNPEHGDYATNLALQVAKKAGV 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A  +   +     +D   IAG GF+N+ L+ +    I+  +  +G  YG N   K
Sbjct: 60  NPRELATWLAEALAKHDAIDVAEIAGPGFLNIRLAAAAQGAIVDQVRQAGTNYGHNDAYK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K+N+EFVSANPTGP+H+G  R A VGD+L  ++  SG EVTREYY ND G QI+  + 
Sbjct: 120 GQKINLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFSN 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+    +          PE  Y G Y++ +   + ++     L   E++     +   V+
Sbjct: 180 SLVAAAK------GEPTPEDGYGGEYIQEIAANVQNQVPDA-LEGTEDEVREKFRAAGVE 232

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   I++ L    +  D++  E+     +   +   + +L     +Y            
Sbjct: 233 MMFAHIKESLHEFGVDFDVYFHENSLF--ESGAVDKAVAHLKDNEKLY------------ 278

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                +      +ST  GDD DR ++KSDG   Y A D+AY   K++RG D  IY++G+D
Sbjct: 279 ----FEDGAWWLKSTDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLAIYMLGAD 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL A AAA+     Q+ VL+ ++V L RDG  ++MSKRAG  ITL  +V+ +G 
Sbjct: 335 HHGYIARLRAAAAAMGYNPEQVEVLIGQMVNLLRDGKAVRMSKRAGTVITLDDLVEAIGV 394

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D  R+ ++     + +D D      QS +NPV+YVQY +AR  SI R+A+++  D     
Sbjct: 395 DGARYSLVRSSVDQSIDIDLGLWASQSSDNPVYYVQYGHARICSILRKAQELGLDA---- 450

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E  LI  L E+P V+  A   +EP+++A +  DLA+VFH  +   
Sbjct: 451 AAMADADLALLTHEKEGDLIRTLGEFPEVVSTAATLREPHRIARFAEDLAAVFHRFYDQC 510

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  P+        + + + RL L  A   ++ + L ++GV +P +M
Sbjct: 511 QVLPK---AGEETQPIHIARLALADAARQVLANALTMVGVSAPEKM 553


>gi|329901351|ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327549132|gb|EGF33727.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 553

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 204/585 (34%), Positives = 304/585 (51%), Gaps = 65/585 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKGF 88
           V+ERPRD AHG +S N AM L++PL  +P  +A+ +VA +  DP      D+V IAG GF
Sbjct: 2   VLERPRDPAHGDVSCNIAMQLAKPLKKNPRELAQQLVAALLADPARAGLVDAVEIAGPGF 61

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           INL L+ +  ++++ +++    +YGR  +G G KV +EFVSANPTGP+HVGH R A +GD
Sbjct: 62  INLRLALAARQEVVHTVLQEAADYGRGTLGTGRKVLLEFVSANPTGPLHVGHGRQAALGD 121

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L++L A  GY+V RE+Y NDAG QI TLA SV  R +      D+D PE  Y G Y+  
Sbjct: 122 ALSALFAVQGYDVMREFYYNDAGVQIATLAASVQARAR-GFKPGDADWPEPAYNGDYIGD 180

Query: 209 VGKELA------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           +  +            + ++   +   L  ++ + V  + +    DL+A  ++ D +  E
Sbjct: 181 IALDFLAGKTVSAADCAPVIASGDVDDLDSIRQFGVAYLRREQDLDLQAFGVKFDNYYLE 240

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +      +   +D L + G  YE                    L  R+T  GDD DR
Sbjct: 241 SSLY--GDGKVHAAVDALIKAGKTYEL----------------DGALWLRTTDYGDDKDR 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQ 380
            + KSDG+YTYF  D+AY   K++RGF N I + GSDH G + R+ A   A  +   K  
Sbjct: 283 VMKKSDGTYTYFVPDVAYHIVKWQRGFGNAINIQGSDHHGTIARVRAGLQAVDLGIPKGY 342

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----EV----------------GSD 420
            + +L ++V + +DG  +K+SKRAG ++TLR +++    EV                G D
Sbjct: 343 PDYVLHKMVTVMKDGEEVKISKRAGSYVTLRDLIEWSSGEVEVVTDAANDAPRDLTRGRD 402

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +VRF ++ RK      FD    + QS ENPV+YVQYA+AR  S+  Q       LD    
Sbjct: 403 AVRFFLISRKADTEFIFDVDLARAQSDENPVYYVQYAHARICSVLAQWGGDESVLDG--- 459

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               +         E  L+  LA+YP  +E+A     P+++AFYL DLA   H +++  R
Sbjct: 460 ----VDLSPLTAPREASLLARLADYPEALEHALEELGPHQVAFYLRDLAGELHSYYNAER 515

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V  ++    M RL L+ A   ++ +GL++IGV +P  M
Sbjct: 516 -------VLVDDMPTRMARLALMLATRQVLRNGLSLIGVSAPLRM 553


>gi|57233947|ref|YP_181982.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|109894986|sp|Q3Z717|SYR_DEHE1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57224395|gb|AAW39452.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 556

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 194/589 (32%), Positives = 312/589 (52%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57
           M       + +   L +   K + E +I      I IE P+   +G  +T+  + L++  
Sbjct: 1   MNSILAIKNIIIESLSQALEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           G  P+ +AE++   I+    +  V +A  GFIN   S  +L  ++ +I+     YG   +
Sbjct: 61  GKRPMELAEILAGYIEPGEGIAKVSVAPPGFINFTFSKEWLCNLVKTILGEAESYGNINM 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G++V IEFVSANPTGP+H+GH R AV+G TL++++  +GY V  E+YINDAG+QI+  
Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNVLKAAGYYVEEEFYINDAGSQIDAF 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++F RYQQAL   ++ +P+  Y G Y+  +  E+  KY  + L  P E     + +  
Sbjct: 181 KRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAAEMVAKYGDKYLQMPLEIAQNDLGEIG 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  M+ +I DDLK+L +  D++ SE   + G     +  +D L    Y+ E         
Sbjct: 240 MARMLCLISDDLKSLKVDFDVWFSERSLYSG--GQYKTAMDILLANNYIAE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
                        F ST++GD  D  +++SDG+ TYFA+D+AY   K+ ER FD +I + 
Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH G+V R++A+ +A+     ++  LL +++ L R G  +++SKR G+ I+L  V++E
Sbjct: 342 GADHQGHVSRMKAMLSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEMISLSEVIEE 401

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG+D+ RF  L R     +DFD    K++S ENPV+YVQYA+AR  SI   AK+      
Sbjct: 402 VGADACRFFFLSRSTESQMDFDLELAKKESAENPVYYVQYAHARICSILSLAKEKGLSYS 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                      E E        I  +AE P ++E      EP+ L +Y  +LA+ FH  +
Sbjct: 462 GGDTALLGEEAELEL-------IRKMAELPEIVETVARTLEPHHLTYYAQELANAFHQFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R       V ++N +L+  RL+LV A   ++   L+++G+ SP  M
Sbjct: 515 KDCR-------VISDNTELSSARLKLVDASRIVLARTLHLMGMTSPQSM 556


>gi|15606252|ref|NP_213630.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226192|sp|O67068|SYR_AQUAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2983452|gb|AAC07033.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 583

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 217/615 (35%), Positives = 336/615 (54%), Gaps = 72/615 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   LKE+          ++   +E+P++ AHG L++N A +L+R L   P+ IA+
Sbjct: 5   VKEKVLKALKELYNTQ------VENFKVEKPKEEAHGDLASNVAFLLARELKKPPVNIAQ 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +  D    SV  A KGFIN   S  +L++     ++SG  Y +  +GKG KV +E
Sbjct: 59  ELADFLSKDETFKSVE-AVKGFINFRFSEDFLKEEFKKFLLSGEAYFKEDLGKGLKVQLE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R AVVGDTLA L  F  Y+VTREYYINDAG Q+  L +S+++RY 
Sbjct: 118 YVSANPTGPLHLGHGRGAVVGDTLARLFKFFNYDVTREYYINDAGRQVYLLGISIYYRYL 177

Query: 187 QALYNNDSD--------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +     D +          +  Y G Y+K + + L       L   PEE  L  V++   
Sbjct: 178 EKCPERDEETFKEIKEIFEKDGYRGEYVKEIAERLRKLVGESLCK-PEEANLKEVREKIL 236

Query: 236 ------------------------YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                                   Y +  MMK IR+DL  ++I  D++ SE   +  D  
Sbjct: 237 KEESIELYYTKKYEPKDVVDLLSNYGLDLMMKEIREDLSLMDISFDVWFSERSLY--DSG 294

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +I+ L  +GYVYE                    L  ++++ GDD DR + +SDG+Y
Sbjct: 295 EVERLINLLKEKGYVYE----------------KDGALWLKTSLFGDDKDRVVKRSDGTY 338

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYFA+D+AY   K++RGF+ +I V G+DH GY+ R++A    +   +  + +LL ++V+L
Sbjct: 339 TYFASDIAYHYNKFKRGFEKVINVWGADHHGYIPRVKAALKMLEIPEDWLEILLVQMVKL 398

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +R+G  +KMSKRAG F+TLR ++DEVG D+VRF+ L +++   LDFD  K KE+S ENPV
Sbjct: 399 FREGKEVKMSKRAGTFVTLRELLDEVGKDAVRFIFLTKRSDTPLDFDVEKAKEKSSENPV 458

Query: 452 FYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +YVQYA+AR   IFR+ K+ +  D+  +     V   E   + +E++LI  +  +   + 
Sbjct: 459 YYVQYAHARISGIFREFKERYKKDVSVEELINYVQHLE---EEAEIKLIKKVLFFKDELV 515

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           + T+ +EP+ L +YL DLA  FH +++H R       +      +   RL LV  +  ++
Sbjct: 516 DITLKREPHLLTYYLIDLAGDFHHYYNHHR-------ILGMEENVMFSRLALVKGIKEVV 568

Query: 571 NSGLNIIGVESPNEM 585
             GLN++GV +P  M
Sbjct: 569 RLGLNLMGVSAPERM 583


>gi|325295274|ref|YP_004281788.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065722|gb|ADY73729.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 546

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 205/579 (35%), Positives = 322/579 (55%), Gaps = 37/579 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++++ +KEI  K      ++D+   E+P+   +G L+TN + +L++ L   P +IA 
Sbjct: 5   IKEKVRSAIKEIYNKEL--SYLVDKASFEKPKKREYGDLATNISFLLAKELKQKPFSIAN 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  ++  P+ + V +AG GFIN + S  +   IL  ++    E+  + IGKG +V +E
Sbjct: 63  ELLKSLESMPEFEKVEVAGGGFINFFFSQRFYTDILKKVLHE--EFYISEIGKGERVLLE 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+HVGH R AVVGD L  +M  +GY+  RE+YINDAG QI  L +S++ R +
Sbjct: 121 YVSANPTGPLHVGHGRGAVVGDVLYRVMRLTGYKPEREFYINDAGRQIKLLGVSIYARMK 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L   +   PE  Y G Y+  V KEL  +   E+++ PEE+ + I  ++  + +++ IR
Sbjct: 181 E-LSGENYPFPEDGYKGEYIIEVAKELLAE-RPEIISLPEEEAIEIAAEFGKERLLEEIR 238

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DLK L ++ D + SE   +  +   +  I+  L  +  +YE                  
Sbjct: 239 KDLKDLRVKFDYWFSEKSLY--EKGEVERILKILEEKDLLYE----------------KD 280

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L  ++T+ GDD DR + +S+G YTYFA+D+AY   K ER FD  I V G+DH GY+ R
Sbjct: 281 GALWLKTTIFGDDKDRVVKRSNGEYTYFASDIAYHYNKIERNFDKAINVWGADHHGYIPR 340

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A+ +    + V+L +LV+L+++G  +KMSKRAG+F+TLR ++DEVG D+VRF  
Sbjct: 341 VKAAIQALGKNPDWLEVILIQLVKLFKNGEEVKMSKRAGNFVTLRWLMDEVGVDAVRFFF 400

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +++   LDFD         ENPV+YVQYA+AR  SI  +AK+       +        
Sbjct: 401 LLKRHDTPLDFDIDLALSSKSENPVYYVQYAHARLCSILDKAKEKGFVPSEENLELLSSE 460

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +E E       L     +Y   +E     +EP++L +YL DLAS  H  ++  R      
Sbjct: 461 EERELIAGCYNL-----KYE--LELVAEKREPHRLTYYLIDLASKLHRFYNKHR------ 507

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   + KL+  RL L+ AV   IN GL+I+ V +P  M
Sbjct: 508 VIMEEDPKLSTARLSLIKAVRRTINLGLDILNVTAPRRM 546


>gi|119961159|ref|YP_948334.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166232754|sp|A1R7X2|SYR_ARTAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119948018|gb|ABM06929.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 549

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 194/584 (33%), Positives = 315/584 (53%), Gaps = 43/584 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S+ +   LK+     ++   E  + D + +ERP++  HG  +TN A+ LS+  G++P 
Sbjct: 5   ELSAAISACLKDAVSTGEIALTESAVPDAVRVERPKNRDHGDWATNIALQLSKQAGMNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A ++   ++  P V  V IAG GF+N+ +  +    +  +IV +G  YG N    G  
Sbjct: 65  EFAGILSNHLQGIPGVTGVEIAGPGFLNITVDAATAGALAKAIVEAGASYGTNQALAGRV 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R A +GD +A ++  SG +VT EYYINDAG+Q+N  A SV 
Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDAIARVLRASGADVTAEYYINDAGSQMNVFANSVL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R           +PEG YPG Y++ +G E+   +   +    +E  LP+++  + +A M
Sbjct: 185 SRLH------GRGVPEGGYPGEYIRELGDEVLKAH-PGIRELTDEAALPVIRAAAYEAQM 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I+  L    ++ D+F SE + H  D   I   +  L  QG+V++              
Sbjct: 238 SDIKTTLAEFGVEFDVFFSEKELH--DAGAIESAVARLREQGHVFD-------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D   +  R+T  GDD DR +++++G  TYFAAD AY+  K +RGF   IY++G+DH G
Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHG 339

Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           Y+ RL+A+AA   +     I VL+ +LV +       K+SKRAG+ I L+ ++  +G D+
Sbjct: 340 YINRLKAIAACAGDDPEVNIEVLIGQLVSV----NGAKLSKRAGNIIELKDLISWLGKDA 395

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VR+ +        L  D   +K+ S ENPVFYVQYA+AR R   R A +    +D  +F 
Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGTARNAAEAG--VDRSVFD 453

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +++   +     E +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   R 
Sbjct: 454 ASLLDHAT-----ENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRV 508

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +P+    +     +   RL L  A + ++ +GL ++GV +P  M
Sbjct: 509 SPQG---EEPVLDVNRTRLWLNDATSQVLANGLELLGVSAPERM 549


>gi|254295941|ref|ZP_04963398.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157806017|gb|EDO83187.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 594

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 317/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    
Sbjct: 69  LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALTAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  + +     R  L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|260577572|ref|ZP_05845511.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258604296|gb|EEW17534.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 551

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 180/583 (30%), Positives = 291/583 (49%), Gaps = 36/583 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            S  +    +       ++  ++     +ERPR+  HG  +TN AM +++  G +P    
Sbjct: 1   MSELITETARTTLDAHGLDSSVVPESATVERPRNPEHGDYATNIAMQVAKKAGTNPREFG 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   +     +D   +AG GFIN+ L+ +   KI+  I+ +G  +G      G  +N+
Sbjct: 61  TWLAESLGAHEGIDEATVAGPGFINIRLAAAAQGKIVEDILTAGANFGHGDELAGAAINL 120

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+G  R A VGD+L  ++   G +VTREYY ND GAQI+  A S+    
Sbjct: 121 EFVSANPTGPIHLGGTRWAAVGDSLGRVLNARGAKVTREYYFNDHGAQIDRFARSLVAAA 180

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +          PE  Y G Y++ +  ++  + + +      ++   + +   V+ M   I
Sbjct: 181 K------GEPTPEDGYGGDYIQDIASQIV-EANPDWQKLGADEAQELFRSQGVELMFAHI 233

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L     + D++  E+     +   +   I  +   G +YE                 
Sbjct: 234 KRTLAEFGTEFDVYFHENSLF--ESGAVEAAIQKIKDNGNLYEA---------------- 275

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
                 RST  GDD DR ++KSDG+  Y A D+AY   K++RG +  IY++G+DH GY+ 
Sbjct: 276 DGAWWLRSTNFGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIA 335

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           RL A AAA+     Q+ VL+ +LV L +DG  ++MSKRAG  ITL  +V+ +G D+ R+ 
Sbjct: 336 RLRAAAAAMGYDPQQVEVLIGQLVNLVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYA 395

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           M+       LD D      +S +NPVFYVQYA+AR  S+ R+A+D+   +  +    +++
Sbjct: 396 MIRSSVDSSLDIDMDLWASKSNDNPVFYVQYAHARLCSLARKAEDLG--VTREGADLSLL 453

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             + E D     LI  L E+P V++ A   +EP+++A Y   LA  FH  +   +  P+ 
Sbjct: 454 THDREGD-----LIRTLGEFPAVVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKP 508

Query: 546 RFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   A N+ L   RL L  A    + + L ++GV +P  M
Sbjct: 509 SDDEQTVAENKALFAARLSLAAASRQTLANALELLGVAAPERM 551


>gi|270308440|ref|YP_003330498.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270154332|gb|ACZ62170.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 556

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 192/589 (32%), Positives = 313/589 (53%), Gaps = 37/589 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57
           M       + +   L +   K + E +I      I IE P+   +G  +T+  + L++  
Sbjct: 1   MNSILAIKNIIIESLSQALEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           G  P+ +AE++   I+    +  V +A  GFIN   S  +L  ++ +++     YG   +
Sbjct: 61  GKRPMELAEILAGYIEPGEGIAKVSVAPPGFINFTFSKEWLCSLVKTVLGEAENYGNINM 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G++V IEFVSANPTGP+H+GH R AV+G TL++++  +GY V  E+YINDAG+QI+  
Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNVLKAAGYYVEEEFYINDAGSQIDAF 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++F RYQQAL   ++ +P+  Y G Y+  +  E+  KY  + L  P E     + +  
Sbjct: 181 KRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAAEMVAKYGDKYLQMPLEIAQNDLGEIG 239

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  M+ +I DDLK+L +  D++ SE   + G     +  +D L+   Y+ E         
Sbjct: 240 MARMLCLISDDLKSLKVDFDVWFSERSLYSG--GQYKTAMDILSANNYIAE--------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
                        F ST++GD  D  +++SDG+ TYFA+D+AY   K+ ER FD +I + 
Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH G+V R++A+ +A+     ++  LL +++ L R G  +++SKR G+ I+L  V++E
Sbjct: 342 GADHQGHVSRMKAMLSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEMISLSEVIEE 401

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG+D+ RF  L R     +DFD    K++S ENPV+YVQYA+AR  SI   AK+      
Sbjct: 402 VGADACRFFFLSRSTESQMDFDLELAKKESAENPVYYVQYAHARICSILSLAKEKGLSYS 461

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                      E E        +  +AE P ++E      EP+ L +Y  +LA+ FH  +
Sbjct: 462 GGDTALLGEEAELEL-------VRKMAELPEIVETVARTLEPHHLTYYAQELANAFHQFY 514

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R       V ++N +L+  RL+LV A   ++   L+++G+ SP  M
Sbjct: 515 KDCR-------VISDNTELSAARLKLVDASRIVLARTLHLMGMTSPQSM 556


>gi|93007063|ref|YP_581500.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|109895023|sp|Q1Q8I7|SYR_PSYCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|92394741|gb|ABE76016.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 609

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 186/625 (29%), Positives = 308/625 (49%), Gaps = 70/625 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S   + +  +    ++     +   I R +D +HG  ++N A+  ++    +P  +AE
Sbjct: 9   LTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAKANPRQVAE 68

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  + D+  + IAG GFIN++L+      +L  I      +G +    G K+ +E
Sbjct: 69  KIVNALPENQDIRQIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVE 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPT  +HVGH R A  G ++++L+   GY+VTREYY+NDAG Q++ LA S + RY 
Sbjct: 129 FVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGYDVTREYYVNDAGRQMDILATSTYLRYL 188

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEKWLPIVKD--- 235
           +         P   Y G Y+  + + L  +++   +        N PE+    I  D   
Sbjct: 189 E-TNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFEINADGEK 247

Query: 236 -------------------------------YSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                                           ++ +++  I+DDL    + ++ + SE  
Sbjct: 248 VLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYECWFSERS 307

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                 S I  ++  L  +GY+YE                    + F+ST  GD+ DR +
Sbjct: 308 I----DSEIEPVLQILEDKGYLYE----------------KDGNIWFKSTDFGDEKDRVV 347

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +++G  TYFA+D+AY K K++RGFD ++ V G+DH GYV R++A   A+     +++V+
Sbjct: 348 RRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDADRLDVV 407

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L+R    ++MS R+G F+TLR +  EVG+D+ RF  + RK    +DFD    K 
Sbjct: 408 LVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKS 467

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QSK+N V+Y+QYA+AR   +  + +     +D  +       QE     SE +LI  LA 
Sbjct: 468 QSKDNLVYYIQYAHARVCRVLEKLETSGLSVDDAI---GAAQQELLVAPSEEELIKLLAA 524

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR----LRFVQANNRKLTMMRL 560
           YP  +  +    EP+ L  YL +LA++FHG +   R  P          A+   +   RL
Sbjct: 525 YPATLMRSATGYEPHILTNYLKELAALFHGWYDSNRILPVSLTSGETPSADEMAMMQARL 584

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           +L  AV  +I++GL ++G+ +P+ M
Sbjct: 585 RLSKAVRQVISNGLGLLGLSAPSSM 609


>gi|299532760|ref|ZP_07046147.1| arginyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718984|gb|EFI59954.1| arginyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 569

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 176/573 (30%), Positives = 294/573 (51%), Gaps = 47/573 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGK 86
           R   E P+  AHG  +  AAM L++PL  +P  + E +   ++        VD++ IAG 
Sbjct: 26  RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GF+N+ L P+  ++++  ++    ++G     +G  + +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFLNIRLKPAAKQEVVREVLAQAQKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAI 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-------YNNDSDLPEG 199
           GD +++L +  G++V RE+Y NDAG QI+TL  S   R +           ++++ L + 
Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204

Query: 200 YYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y+  + K    K        E     + +    ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D +  E   +  +   +   ++ L   G  YE                    L  RST
Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373
             GDD DR + K+DG YTYF  D+AY   K++RGF  ++ + G+DH G + R+ A   A 
Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366

Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V   +   + +L  +VR+ R+G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD      Q+ +NPV+YVQYA+AR +S+ R  ++        L   ++   E    
Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                L++ LA+YP ++  A     P+ + FYL DLAS +H ++   R       +  ++
Sbjct: 484 PQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------ILVDD 536

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            K+ + RL LV A A ++++GL ++GV +P  M
Sbjct: 537 EKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569


>gi|313899150|ref|ZP_07832673.1| arginine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956043|gb|EFR37688.1| arginine--tRNA ligase [Clostridium sp. HGF2]
          Length = 509

 Score =  518 bits (1335), Expect = e-144,   Method: Composition-based stats.
 Identities = 193/542 (35%), Positives = 291/542 (53%), Gaps = 34/542 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + LK  L     K    +     IVIE P+D +HG  STN AM L+R L  +
Sbjct: 1   MN---QIENNLKQALHNAVQKAFDTELDTASIVIEIPKDKSHGDYSTNVAMQLTRVLKNN 57

Query: 61  PLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE +V  + K   D++S  IAG GFIN  +  + L +I++ ++     YG +  G+
Sbjct: 58  PRKIAEAVVEALDKAAADIESCEIAGPGFINFTIKNTSLAQIITRVLQEQDNYGNSNDGQ 117

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTG +H+GH R A  GD++  LM  SGY+V REYY+NDAG QI  L  
Sbjct: 118 GLKVNVEYVSANPTGDLHLGHARGAAWGDSITRLMKASGYDVCREYYVNDAGNQIVNLGK 177

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+  RY++ L   D DLPE  Y G  +K++   +A++Y    + + +   L   K+  + 
Sbjct: 178 SLQARYREHL-GLDFDLPEDGYHGEDVKNIAIAIAEEYKDAYVEYSD-ANLKFFKEKGIA 235

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  IR DL    +  D++ SE      D   +   ++ L  +G  YE           
Sbjct: 236 FELDKIRRDLDNFRVHFDVWSSEQSI--RDEGKVEKALEVLHEKGLTYE----------- 282

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L F +T  GDD DR L K DGSYTY   D+AY K K +RG+D ++ ++G+D
Sbjct: 283 -----KDGALWFATTRFGDDKDRVLRKKDGSYTYLVPDIAYHKDKLDRGYDLLVDLLGAD 337

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H GY+ RL+A   A+     ++ V + ++VRL  +G  +KMSKR G+ +T+R + +EVG 
Sbjct: 338 HHGYIPRLKASIEALGNNPDKLQVDIIQMVRLVENGEEVKMSKRLGNAVTIRELCEEVGV 397

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VR+  + R     LDFD    ++QS +NPV+Y QYA+AR  SI RQA +I     F+L
Sbjct: 398 DAVRYFFVQRAVDTHLDFDLGLARKQSNDNPVYYAQYAHARICSILRQASEIAEAKSFEL 457

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E+ L+ ++ E+  V+ +A  ++ P+K+  Y+  LA  FH  ++  
Sbjct: 458 LT----------HEKEIALMKYINEFTNVVSDAARSRAPHKVCNYIQKLAQHFHSFYNVC 507

Query: 540 RE 541
           + 
Sbjct: 508 KV 509


>gi|167901057|ref|ZP_02488262.1| arginyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 594

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 200/615 (32%), Positives = 317/615 (51%), Gaps = 65/615 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + L+N +K++    K +     +L  I +ERP+  AHG ++ N A+ L++PLG +P  
Sbjct: 9   LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +AE IVA +   P+    VD+  IAG GFINL L+P+  + ++ +++  G  +G +    
Sbjct: 69  LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA+
Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233
           S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  +
Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  + +    DLKA  ++ D +  E   +      +   +D L   G  YE     
Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +I
Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349

Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+R
Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409

Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +++                       G D+VRF ++ RK      FD     +Q+ ENP
Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     + L+  LAEYP V+ 
Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P+ +AFYL +LAS FH  ++  R       V  + +     R  L+ A   ++
Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVL 579

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 580 ENGLAMLGVSAPSKM 594


>gi|120609117|ref|YP_968795.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166232752|sp|A1TJ83|SYR_ACIAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120587581|gb|ABM31021.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 569

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 180/595 (30%), Positives = 297/595 (49%), Gaps = 49/595 (8%)

Query: 11  LKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +K  L         K+      R   E P+  AHG  +  AAM L++PL L+P  + E +
Sbjct: 4   VKQELLAALAGELEKLSPGSAGRAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQL 63

Query: 69  VARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            A ++  P     VD++ IAG GF+N+ L  +  ++I+  ++ +G  +G      G +V 
Sbjct: 64  KAALEATPAFARWVDAIEIAGPGFLNIRLKAAAKQEIVREVLSAGDRFGYQK-DNGQRVL 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD + +L +  G+ V RE+Y NDAG QI+TL  S   R
Sbjct: 123 VEFVSANPTGPLHVGHGRQAALGDAICNLFSTQGWSVHREFYYNDAGVQIDTLTKSTQLR 182

Query: 185 YQ-----QALYNNDSDLP--EGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPI 232
            +        +  D + P  + +Y G Y++ +  +   K        E     + +    
Sbjct: 183 ARGFKPGDECWPTDPENPASKTFYNGDYIQDIANDFLAKKTVKADDREFTANGDVEDYDN 242

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A N+  D +  E   +      +   ++ L  +G+ YE    
Sbjct: 243 IRQFAVAYLRNEQDKDLQAFNLHFDQYYLESSLYT--SGRVEATVNRLVEKGHTYE---- 296

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  +ST  GDD DR + K DG+YTYF  D+AY   K+ERGF  +
Sbjct: 297 ------------QDGALWLKSTDYGDDKDRVMRKKDGTYTYFVPDVAYHIAKWERGFAKV 344

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + + G+DH G + R+ A   A  V   +   + +L  +VR+ + G  +K+ KRAG ++TL
Sbjct: 345 VNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVKGGKEVKIGKRAGSYVTL 404

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +++    D+VRF +L RK      FD      Q+ +NPV+YVQYA+AR +S+ R   +
Sbjct: 405 RDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWAE 464

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                   L   ++   E         L++ LA+YP ++  A   + P+ + FYL DLA+
Sbjct: 465 AGGGDVASLKDVDLSALEG---PQAQALMLQLAKYPEMLTAAAEGEAPHDVTFYLRDLAA 521

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +H ++   R       +  ++  +   RL LV A A ++++GL ++GV++P  M
Sbjct: 522 SYHSYYDAER-------ILVDDEAVKRARLALVAATAQVLHNGLKVLGVDAPARM 569


>gi|294648857|ref|ZP_06726313.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825248|gb|EFF83995.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 599

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 192/629 (30%), Positives = 314/629 (49%), Gaps = 74/629 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + +  +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVHTLQQQGVLPSDWTNTSHLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I     +YGR+ +   
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIEAQKDQYGRSQVNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS--------SELLNFPEE----- 227
            + RY + L       P+  Y G Y+K + +E+ +K              + PE+     
Sbjct: 179 TYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEIINKDGNAYVRAVADIYKDVPEDVQYAE 237

Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                          +   +    ++ A++  I+DDL    +  
Sbjct: 238 ALDAEGNKVVLSGDKEKHIDGLITNSQQQLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D + SE          I + +  L ++GY+YE                    + F+ST  
Sbjct: 298 DEWFSEASL----TEKIDEALATLDQRGYLYE----------------KEGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR  SI  +AK+    + FD+     +      D +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAKEKG--IAFDVASARQVANLLTLD-AET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP ++  A    EP+++  YL DLA++FHG ++       ++FV   N  L+
Sbjct: 515 EILAKLAAYPEIVIRAANVCEPHQIGNYLKDLAALFHGWYAQ----DGVKFVDEANIPLS 570

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 571 QARLLLSINVQQVLRNGLELLGVSAPEAM 599


>gi|226952204|ref|ZP_03822668.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837042|gb|EEH69425.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 599

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 192/629 (30%), Positives = 314/629 (49%), Gaps = 74/629 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + +  +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVHTLQQQGVLPSDWTNTSHLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I     +YGR+ +   
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIEAQKDQYGRSQVNAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS--------SELLNFPEE----- 227
            + RY + L       P+  Y G Y+K + +E+ +K              + PE+     
Sbjct: 179 TYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEIINKDGNTYVRAVADIYKDVPEDVQYAE 237

Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                          +   +    ++ A++  I+DDL    +  
Sbjct: 238 ALDAEGNKVVLSGDKEKHIDGLIANSQQQLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D + SE          I + +  L ++GY+YE                    + F+ST  
Sbjct: 298 DEWFSEASL----TEKIDEALATLDQRGYLYE----------------KEGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR  SI  +AK+    + FD+     +      D +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAKEKG--IAFDVASARQVANLLTLD-AET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP ++  A    EP+++  YL DLA++FHG ++       ++FV   N  L+
Sbjct: 515 EILAKLAAYPEIVIRAANVCEPHQIGNYLKDLAALFHGWYAQ----DGVKFVDEANIPLS 570

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++ +GL ++GV +P  M
Sbjct: 571 QARLLLSINVQQVLRNGLELLGVSAPEAM 599


>gi|73667116|ref|YP_303132.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|109894989|sp|Q3YRX1|SYR_EHRCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72394257|gb|AAZ68534.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 576

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 244/587 (41%), Positives = 359/587 (61%), Gaps = 14/587 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M L       +   L  ++ K  I ++  IL ++V++ P +  +G L TNAA+ILS+ + 
Sbjct: 1   MNLINTIKDCIVERLHVLNAKKLIILDDVILSKLVVDYPNNHDYGDLYTNAALILSKYVK 60

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            DPL +AE+++  +    ++ ++ +   GFIN  LS     +++SSI +   ++    IG
Sbjct: 61  KDPLDVAEILLRELSNIKEISNISVVKPGFINFNLSLYVWYEVISSINMLKEDFANVNIG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KVNIEFVSANPTGPMH+GH R A+ GD LA+L+   GY+V REYYINDAG QI+ L 
Sbjct: 121 NGRKVNIEFVSANPTGPMHIGHARGAIFGDVLANLLTKVGYQVVREYYINDAGTQIDVLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV+ RY++A    D  +  G YPG+YLK +G+ L +KY ++LL     + + I++D S+
Sbjct: 181 ESVYLRYKEAA-GQDIVIGSGLYPGLYLKEIGQLLYEKYGTDLLEMNSAQKMKIIRDISL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + ++ +I+ DL  L I+HD+F SE +  R +   +   +  L  +  +Y G+L  PK   
Sbjct: 240 KHLLDLIKQDLVLLGIKHDVFTSEAELLRNNV--VEKCVKLLEDKKLIYYGVLDQPKGTE 297

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                  RKQ+LF+ST  GDDVDR L K DGS+TYFA+D+AY   K  RGF +MI  +GS
Sbjct: 298 NNNW-QPRKQMLFKSTDFGDDVDRALQKVDGSWTYFASDIAYHFDKISRGFQHMILELGS 356

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRL+A   A+S+  A I++ L  +V    +G+ +KMSKR+G+F+T++ V++EVG
Sbjct: 357 DHIGYVKRLKAAVKALSDNTATIDIKLHNIVNFLNNGVQVKMSKRSGEFLTIKDVIEEVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF+ML RK+  +LDFDF KV EQSK NP+FYVQYA+AR  S+ R A +I    D D
Sbjct: 417 IDVVRFIMLTRKSDAVLDFDFVKVVEQSKNNPIFYVQYAHARVCSLMRNAPNILKIEDTD 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +           E+ LI  LA++  VIE +    EP+++ FYL ++A  FH  W +
Sbjct: 477 FSVLS--------SKEEILLIKLLAKWSNVIELSAKTAEPHRITFYLIEVAETFHMLWGY 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++   RF+  ++  LT  R+ L  AVA +I+SGL I  +    EM
Sbjct: 529 GNKDVNRRFIIDDDINLTSARIYLARAVAYVISSGLKIFSIVPLEEM 575


>gi|188996539|ref|YP_001930790.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931606|gb|ACD66236.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 553

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 212/584 (36%), Positives = 333/584 (57%), Gaps = 32/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  +   ++ N LK+ +    + + + D+I IE P++   G LSTNAA ILS+ L   P 
Sbjct: 1   MKQEIRDKILNILKQNNL---LFEGVEDKIKIESPKEEKFGDLSTNAAFILSKNLNKKPF 57

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  + A  + DP  + V +AG GFINL++S ++  +IL+  +    E+G+       K
Sbjct: 58  EVANQLKALFEKDPYFEKVEVAGGGFINLFISDAFYHQILNKAIEEKDEFGKAKEKNKGK 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            NIE+VSANPTGP+H+GH R AVVG+ L++L  + GY+V RE+YINDAG QI  L +SV+
Sbjct: 118 TNIEYVSANPTGPLHLGHGRGAVVGNILSNLYDYIGYKVEREFYINDAGNQIKKLGMSVY 177

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAM 241
            R++Q +       PE  Y G Y+K + KEL      ++L+F  EE+ +    +Y+   +
Sbjct: 178 ARFRQ-IEEPSYPFPEDGYHGEYIKDIAKELYHYEREKILSFLDEEEAIEFCAEYAKNFL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I+ DLK + ++ DI+ SE   +  +   +   +  L  +G +YE             
Sbjct: 237 LDEIKKDLKLIGVEFDIWYSERHLY--EHGKVEQALKFLESKGLIYE------------- 281

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  L  ++++ GD+ DR + KSDGSYTYFAAD+AY   KY R +D +I V G+DH 
Sbjct: 282 ---KDGALWLKTSLYGDEKDRVIRKSDGSYTYFAADIAYHYDKYLRNYDFIINVWGADHH 338

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY  RL+A   A   K+  INVL  +LV+L+ +G  +KMSKR+GDFITLR +V+EVG D+
Sbjct: 339 GYFPRLKAAIMAFGVKEDWINVLFIQLVKLFNNGEEVKMSKRSGDFITLRELVEEVGKDA 398

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V +    +  +  L+FD     ++S ENPVFYVQYA+AR  S+FR+A+  F     + F 
Sbjct: 399 VIYFFASKDPNTHLNFDIDIALKKSNENPVFYVQYAHARISSVFREAQQRFNFNPEEDFE 458

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            ++   + +    E  L+ +++  P  I +ATI  +P+K+    Y+LAS  H ++ +   
Sbjct: 459 ADLSLLKEDL---ERSLMKYISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH-- 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +F+  N+ KL   RL L+ AV +++ +   I+G+     M
Sbjct: 514 ----KFLIENDEKLMKARLYLLKAVRNVLRALFKIMGITPVERM 553


>gi|262281322|ref|ZP_06059103.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257148|gb|EEY75885.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 596

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L + ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALDHAVQTLQQEGVLPSDWNNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++A +    D+    IAG GFIN +L+      IL  I      +GR+     
Sbjct: 59  PRDLAEKVLAALPEVVDISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A L+  +G +V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVAKLLEATGAKVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226
            + RY + L  N    P+  Y G Y+K + + + DK                 E + + E
Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTIIDKDGDAYLREVADVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE        + I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----SAEIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD      QSK+N V+Y+QYA+AR   +  +A       D +    +          +E 
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKALSTGLQFDVNAARTHAT---RLSLDAET 514

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +++  LA YP  +  A  A EP+++  YL +LA++FH  ++  +       V +++ +LT
Sbjct: 515 EILAKLAAYPDAVLRAANAYEPHQVGNYLKELAALFHAWYNEHK-------VLSDDAELT 567

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L   V  ++++GL ++GV +P+ M
Sbjct: 568 QARLLLSINVQQVLHNGLELLGVSAPDSM 596


>gi|51246604|ref|YP_066488.1| arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81641259|sp|Q6AJJ9|SYR_DESPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50877641|emb|CAG37481.1| probable arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 552

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 175/584 (29%), Positives = 298/584 (51%), Gaps = 34/584 (5%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + +     L    +E         +   +  +E P+    G  STN A++L+     +P 
Sbjct: 2   IRSQLKELLDRCFQEGVDNGSWSDRGAGKYTVELPKHEGQGDFSTNIALVLAGIEKRNPR 61

Query: 63  TIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +A ++  ++ ++   V  V IAG GF+N+ + P+    +L+ +  +G  +GR+ +G G 
Sbjct: 62  ELAGIVAEKLGLETAIVAGVEIAGPGFVNITIQPAVWHGVLAEVFSAGENFGRSQVGAGR 121

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EFVSANPTGP+ +GH R A++GD++A L+  + ++V REYY N+AG Q+  L  S 
Sbjct: 122 KVMVEFVSANPTGPLSIGHGRQAILGDSIARLLEATNHDVFREYYYNNAGRQMRVLGEST 181

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY + +   +   PE  Y G Y+  + + L D++  +L + P+   +   KD + +A+
Sbjct: 182 RARYLELI-GAEFSFPEDGYQGEYIIDIAQSLVDEHGEKLKDEPD---VEPFKDQAEKAI 237

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            K I   L+ + I  D + +E   +  +   I  ++  L  +G VYE             
Sbjct: 238 FKDISGTLERMGIHFDNYYNERSLY--ENGHIDSVVQELRDKGLVYE------------- 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  + F +T +G + DR ++KS G  TY   D+AY + K++R FD +I + GSDH 
Sbjct: 283 ---KDDAVWFETTKLGQEKDRVIIKSTGEPTYRLPDIAYHREKFKRNFDWLIDIFGSDHI 339

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             V  + +   A+    +++ VLL + V L RDG  +KMS R  +F+T+  ++D VG D 
Sbjct: 340 ATVPDVLSGVEALGYDASKVTVLLHQFVTLTRDGKQVKMSTRKANFVTVDELIDVVGEDV 399

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +RF  + RK    L+FD      QS++NPV+YVQYA+AR  SI  Q+ +           
Sbjct: 400 LRFFYMLRKADSQLEFDLDLATSQSQDNPVYYVQYAHARLCSILAQSGERGIVP----AE 455

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                 +   +  EL L+  L+ +P  IE + +   P+K   YL + A  FH +++  + 
Sbjct: 456 VGSSLLQRLQEPEELALLKTLSGFPAAIEGSALDLAPHKFIHYLMEFAGQFHSYYNKHK- 514

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V   + +L+  RL L+ A+   + +GL+IIG+ +P  M
Sbjct: 515 ------VITEDLELSQARLCLIQALQLTLQNGLHIIGLTAPKSM 552


>gi|240142278|ref|YP_002966788.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240012222|gb|ACS43447.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 601

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 262/580 (45%), Positives = 362/580 (62%), Gaps = 3/580 (0%)

Query: 8   SSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             R+      +    ++      +RIV+E  RD AHG L+T  AM L +  G+ P  IA 
Sbjct: 9   RDRIAAAFGRLVASGRLPAVPPSERIVVEPTRDPAHGDLATGVAMTLGKAFGMPPSAIAA 68

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +  DP V S  +AG GF+N+ L+P      + S V SG  YGR        + +E
Sbjct: 69  ALADELAADPGVVSAAVAGPGFVNVALAPEAFGDAVRSAVSSGAAYGRRPPDGTPPMVVE 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGPMHVGH R AVVGD LASL+AF+G  V+REYY+NDAGAQ++ LA SVF RY 
Sbjct: 129 FVSANPTGPMHVGHGRGAVVGDALASLLAFAGRTVSREYYVNDAGAQVDVLARSVFVRYL 188

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +AL      L EG YPG YL  VG+ LAD +       PE +WLP  +D +V+AMM++IR
Sbjct: 189 EALGEKTDALGEGLYPGEYLVPVGQALADGHGRAHAGRPEAEWLPPFRDAAVRAMMELIR 248

Query: 247 DDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +DL+ L ++HD F SE     G D   + + I +L  +  V+ G LPPPK K     + D
Sbjct: 249 EDLRLLGVRHDSFFSERSLTAGPDGDLVAETIRDLRDRDLVHVGTLPPPKGKPQDDWE-D 307

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R+Q LFR+T+ GD+VDRPLLK+DGSYTYFAAD+AY + K+ RG  ++I V+G+DH GYV+
Sbjct: 308 REQTLFRATLFGDEVDRPLLKADGSYTYFAADIAYHRSKWLRGGRHLIDVLGADHGGYVR 367

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R+ A   A +  +A     L ++V L RDG P++MSKR+G F+TLR VV+EVG+D+ RF 
Sbjct: 368 RMAAAVGAATRGEATFEAKLVQMVSLVRDGQPVRMSKRSGSFVTLREVVEEVGADAFRFT 427

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML+R++   ++FD  +V  Q+KENPV+YVQY +ARCRS  RQA +  P  D         
Sbjct: 428 MLFRRSDAQMEFDLAQVVLQAKENPVYYVQYGHARCRSALRQAAEAMPSADLSPGALAQA 487

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 D  E +LI  +A++PR +  A  A EP+++AF+L++ AS  H HW+ G  +P L
Sbjct: 488 DLGLLRDPGERELIRLVADWPRQVVLAARAGEPHRIAFFLHETASRLHAHWTRGNADPAL 547

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           RF+   N  +T  RL L  AVA+++ +GL I+GV +P+ M
Sbjct: 548 RFIVPGNVSVTRARLALAAAVAAVLAAGLGILGVGAPDRM 587


>gi|222100449|ref|YP_002535017.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572839|gb|ACM23651.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 549

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 179/555 (32%), Positives = 282/555 (50%), Gaps = 31/555 (5%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
              IE P     G LSTN AM L++ L  +P  IA+ I   +  D   D + + G GFIN
Sbjct: 26  DFEIEVPPRKEFGDLSTNVAMKLAKQLKKNPREIAQEIAGLLIEDSVFDRIEVMGPGFIN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +LS   L +++ +I+  G EYGR  +GKG K+  E+ SANPTGP  VGH R  V+GD L
Sbjct: 86  FFLSNEILHEVVKTILEQGEEYGRENVGKGLKIQFEYGSANPTGPFTVGHGRQIVIGDVL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           + +    GY+VTRE YINDAG QI  LA S++ RY + ++    ++PEG Y G YL  + 
Sbjct: 146 SEVFKELGYDVTREMYINDAGKQIKLLAQSLWVRYNE-IFGVKMEIPEGGYRGEYLVDIA 204

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           KELA +      N   E+     K+ ++  ++  +++ L+ +    D++ SE      + 
Sbjct: 205 KELASEIGDRYKNVWNEEVEEFFKNAALDRILSSMKNTLERMGSSFDVYYSEMSL--IED 262

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + +++  L  +  VYE                    L  R +   ++ D+ L++SDG+
Sbjct: 263 GTVEEVLRILKEKDLVYE----------------KDGALWLRVSKFVEEDDKVLVRSDGT 306

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           YTYF  D+AY   KY RGF  +  + GSDH G++ R++A   A+       NV+L + V 
Sbjct: 307 YTYFMTDIAYHYKKYRRGFKRVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVT 366

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L R G  ++MS RAG+FITL  ++DEVG D+ R+       +  + FD    K ++ +NP
Sbjct: 367 LKRGGETVRMSTRAGEFITLDELLDEVGKDAARYFFAMVDPNNHMVFDIDLAKAKTMDNP 426

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  ++F  A+    + +           +   +  E  L+ +L  +   ++
Sbjct: 427 VYYVQYAHARISNLFLNAEKKGVEFEQGK------DLDLLGNEEERTLMRNLGMFSSALK 480

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P +L  YL  L+  FH  ++          V   N+ L+  RL L  A   ++
Sbjct: 481 EVAKMFAPNRLTNYLQMLSESFHVFYTKH------VIVDPENKALSNARLNLALATKIVL 534

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+ +P  M
Sbjct: 535 KKGLKLLGISAPERM 549


>gi|19552403|ref|NP_600405.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390067|ref|YP_225469.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|1351171|sp|P35868|SYR_CORGL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21323946|dbj|BAB98572.1| Arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325403|emb|CAF19883.1| ARGINYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 550

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 186/582 (31%), Positives = 305/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+    +++  +L +++V+ERPR+  HG  +TN A+ +++ +G +P  
Sbjct: 4   ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +  D  +DS  IAG GF+N+ L+ +   +I++ I+  G  +G +       V
Sbjct: 64  LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K + + + +K+  E L         + +   V+ M +
Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKH-PEALALEPAATQELFRAEGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYEN-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K+ RG +  IY++G+DH GY
Sbjct: 281 --EGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+  K   + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A+ +   +  +    +
Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLG--VTEEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V++ A   +EP+++A Y  +LA  FH  +      P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   V  +   +   RL L  A    + + L+++GV +P +M
Sbjct: 512 K---VDEDTAPIHTARLALAAATRQTLANALHLVGVSAPEKM 550


>gi|256825648|ref|YP_003149608.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256689041|gb|ACV06843.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 547

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 186/581 (32%), Positives = 308/581 (53%), Gaps = 39/581 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             +  +   L+      ++  +I   + +ERP+D  HG  ++N A+ L++  G++P   A
Sbjct: 5   QLAQAITAALEAAVADGQIAVEIPAEVRVERPKDRNHGDWASNIALQLAKKAGMNPREFA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E++ AR++    V +V IAG GF+N+ L  +   ++  +IV     YG N    G  +N+
Sbjct: 65  EIVAARLREAEGVAAVDIAGPGFLNITLDAASAGELARTIVEGDATYGNNDALTGHTINL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF+SANPTG +HVGH R A +GD++  L+A SG +VT EYYINDAGAQ++    SV    
Sbjct: 125 EFISANPTGHLHVGHTRWAALGDSMRRLLAASGADVTAEYYINDAGAQMDKFGASVLAAA 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +          PEG YPG Y++ +G   A +   +L   P+++ +   ++     M++ I
Sbjct: 185 K------GEPTPEGGYPGEYVQELGAA-ALEQRPDLAELPQDEAVTAARELGYPMMLQQI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +D L A  +  D++ SE   H      +   ++ L  QG+VYE                +
Sbjct: 238 KDTLDAFGVHFDVWFSEASLH--SSGLVEKAVERLREQGHVYE----------------E 279

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  R+T   DD DR L++++G  TYFA+D AY+  K +RGF   IY++G+DH GYV 
Sbjct: 280 GGAVWLRTTDFTDDKDRVLVRANGEPTYFASDAAYYLSKKDRGFTEKIYLLGADHHGYVN 339

Query: 366 RLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           RL+A++AA  +  A+ I + + +L+ +       ++SKRAG+ + LR +++ +G+D++R+
Sbjct: 340 RLKAISAAAGDDPAKDIEIRIGQLISI----NGARLSKRAGNVVDLRDMLEWIGADAIRY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +        L+ D  ++++Q+ +NPVFYVQYA+AR  ++ R A            P   
Sbjct: 396 SLGRYPADTPLELDGEELRKQTNDNPVFYVQYAHARTANVARLAAADGVSRAEGFDPS-- 453

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E  L+  L ++PRV+  A   +EP+++A YL  LA  FH  +   R  PR
Sbjct: 454 ----LLNDPTEATLLAALGDFPRVVAQAAELREPHRVARYLEGLAGAFHKWYDACRVRPR 509

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     L   RL L  A   ++  GL+++GV +P  M
Sbjct: 510 D---GEEVTDLHRSRLMLNDATGVVLRRGLDLLGVSAPERM 547


>gi|268316200|ref|YP_003289919.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333734|gb|ACY47531.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 564

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 195/603 (32%), Positives = 303/603 (50%), Gaps = 59/603 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     L+  L+ ID    V +    R  +E+P +  HG L+TNAAM L+R L   P 
Sbjct: 1   MKAYIEEALRQVLRTID---GVPEDF--RPELEKPNNPEHGDLATNAAMQLARYLKRPPR 55

Query: 63  TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IAE I  R++  P       SV +AG GF+N   +P YL ++L+ I+ +G  YGR+ +G
Sbjct: 56  QIAEEIAERLRALPLDPRRVASVEVAGPGFLNFRFAPDYLAQVLADILAAGERYGRSDLG 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G    +E+VSANPTGP+ VGH R AV+GDT+A+L+ + GY VTREYY NDAG Q+  L 
Sbjct: 116 QGRPAIVEYVSANPTGPLTVGHGRNAVLGDTIANLLDWIGYRVTREYYYNDAGRQMRVLG 175

Query: 179 LSVFWRYQQALYNN----------------DSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            SV  RY   +  N                    PE  Y G Y+  + + L +++   L 
Sbjct: 176 ESVRARYLALVDPNLPTKKIQAAEGEWVEVPEPFPEDGYLGDYIIDIARMLYEQHGEALR 235

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +  +   +   K+ + + + + IR  L  L I  D + +E   +  +   I ++++ L  
Sbjct: 236 DVED---ITPFKEAAEKVIFEDIRRTLARLGIHMDSYFNEHTLY--ENGKIWEVVEALRA 290

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +GY+YE                    + FR++ +G D D  L+K  G  TY   D+AY  
Sbjct: 291 KGYIYE----------------KDGAVWFRTSALGKDQDTVLVKRTGEPTYRLPDIAYHI 334

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K+ERGF+ ++ V G+DH      +      +    ++++V++ + V L R G P+KMS 
Sbjct: 335 TKFERGFERIVDVFGADHIATYPDVLRALEVLGYDVSKVDVVIYQFVTLVRGGEPVKMST 394

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R   ++TL  ++DEVG D  RF  L R  +  L+FD    +E S++NPVFY+QYA+AR  
Sbjct: 395 RKATYVTLDELIDEVGEDVTRFFFLMRSPNTHLEFDLDLAREASEKNPVFYLQYAHARIC 454

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A ++       L              +E  LI  L  +P VI+ A    EP+++A
Sbjct: 455 SIMRKADEVG------LKESPNPDLTLLQHEAEQALIKELMRFPEVIQEAAQTYEPHRVA 508

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL ++A  F   + H R       +      L   RL L  A   ++ +GL ++G+ +P
Sbjct: 509 NYLREVAVAFTKFYDHCR-------IIGEPEPLAQARLALARAARLVLANGLRVLGISAP 561

Query: 583 NEM 585
             M
Sbjct: 562 ERM 564


>gi|300088120|ref|YP_003758642.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527853|gb|ADJ26321.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 557

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 198/590 (33%), Positives = 317/590 (53%), Gaps = 38/590 (6%)

Query: 1   MYLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M       +R+ +     + E     ++       + +E P++  HG  +++  + ++R 
Sbjct: 1   MNGLLAVKTRIIDIIGQAVAEAQAAGRLPAVSTPSVGVEHPQNTGHGDYASSLPLKMARA 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            G+ PL IA  IV  I   P++ SV +A  GFIN  LS  ++ + + +++ +G  YG   
Sbjct: 61  TGMKPLDIAAAIVEFIPEIPEIKSVAVAPPGFINFTLSDGWIIEQVEAVIKTGDTYGCID 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
            G G  V +E+VSANPTGP+HVGH R AV+G TLA  +  +GY+V +E+Y+NDAG QI +
Sbjct: 121 TGAGRTVQLEYVSANPTGPIHVGHGRGAVLGSTLARALQAAGYKVQQEFYVNDAGNQIAS 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              S+  RY QAL   D+++P   Y G Y+  +  ++A ++     N  E++ L  +   
Sbjct: 181 FKRSLRARYLQAL-GRDAEMPAEGYFGRYMTDLAGDIAAEHGDAFANLTEDEALEKLGAI 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++ M+ +IRDDL  L +  D + SE      +      +ID L + GY+ E        
Sbjct: 240 GLERMLGVIRDDLSGLGVNFDRWFSERSLF--ESGEYEAVIDRLKQSGYITE-------- 289

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                       + F ST +G++ D  +++SDG+ TYFA+D+AY   K+ +RGFD +I +
Sbjct: 290 --------KEGAVWFASTALGENKDNVIVRSDGTPTYFASDIAYHYDKFVKRGFDKVINI 341

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G+V R++AV  A+     ++++++ +LV L R    +++SKR GD ITLR V+D
Sbjct: 342 WGADHQGHVSRMKAVLQALDIDPERLHIIIAQLVTLRRGEELVRLSKRTGDMITLREVLD 401

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           EVG+D+ RF  L R     +DFD    K+QS +NPV+YVQYA+AR  SI   A +   D 
Sbjct: 402 EVGADACRFNFLARGADSQMDFDLELAKKQSADNPVYYVQYAHARICSIIELAAERGIDY 461

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                 R V P E E     L L       P VI   T   EP+ LA+Y   LA+ FH  
Sbjct: 462 HAGDVTRLVEPAELELLRKMLLL-------PEVIAQVTETLEPHHLAYYAQVLATAFHAF 514

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   R       V +++  L+  RL+L++A   ++   L ++G+ +P++M
Sbjct: 515 YKDCR-------VVSDDLCLSQARLKLMYAARRVLARTLELMGMSAPDKM 557


>gi|260222579|emb|CBA32280.1| Arginyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 565

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 180/595 (30%), Positives = 294/595 (49%), Gaps = 53/595 (8%)

Query: 11  LKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +K+ L +        +      +   E P+  AHG  +T AAM L++PL ++P  +AE +
Sbjct: 4   VKHELLQALAACLENLSPGAGPKAAFESPKVAAHGDFATTAAMQLAKPLKMNPRQLAETL 63

Query: 69  VARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
              +   P        + IAG GFIN+ L P+  ++++  ++  G  +G      G  V 
Sbjct: 64  RGELLATPVYQRWVQDIEIAGPGFINIRLKPAAKQEVVREVLGQGARFGYQ-PESGKPVL 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD + +L A  GY+V RE+Y NDAG QI+TL  S   R
Sbjct: 123 VEFVSANPTGPLHVGHGRQAALGDAICNLFATQGYKVHREFYYNDAGVQIDTLTKSTQLR 182

Query: 185 YQ-----QALYNNDSDLPE--GYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPI 232
            +      + +  D D PE   +Y G Y+  + +    K        E     +      
Sbjct: 183 AKGFKPGDSCWPTDPDNPESKAFYNGDYIADIAEAFKAKASIKADDREFTANGDVDDYDN 242

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A N+  D +  E   +      +   ++ L   G  YE    
Sbjct: 243 IRQFAVAYLRNEQDKDLQAFNLHFDQYYLESSLYT--SGRVDAAVNKLVGNGKTYE---- 296

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  +ST  GDD DR + K DGSYTYF  D+AY   K+ERGF  +
Sbjct: 297 ------------QDGALWLKSTDYGDDKDRVMRKKDGSYTYFVPDVAYHIAKWERGFAKV 344

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + + G+DH G + R+ A   A  V   +   + +L  +VR+ R G  +K+SKRAG ++TL
Sbjct: 345 VNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTL 404

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +++    D+VRF +L RK      FD     +++ +NPV+YVQYA+AR  S+      
Sbjct: 405 RDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVQKNNDNPVYYVQYAHARICSVLASWG- 463

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                  D+     +   +   +    L++ LA++P ++  AT  + P+ + FYL +LA+
Sbjct: 464 ------GDVAALKGVDLSALESSQAQALMLLLAKFPEMLTAATEGEAPHDVTFYLRELAA 517

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +H ++   R       +  ++  + + RL LV A A ++++GL ++GV +P +M
Sbjct: 518 SYHSYYDAER-------ILVDDEAVKLARLALVAATAQVLHNGLAVLGVSAPQKM 565


>gi|109894991|sp|Q5FH87|SYR_EHRRG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 576

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 243/587 (41%), Positives = 353/587 (60%), Gaps = 14/587 (2%)

Query: 1   MYLFADFSSRLKNYLK--EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +       +   L    ID  +   + IL +++++ P +  HG L TNAA+ILS+ + 
Sbjct: 1   MSVACTIRRHIIEKLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIK 60

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P+ IA+++V       ++  + +   GFIN  +S     +I+ SI     ++G    G
Sbjct: 61  KNPMDIAKILVDEFSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +VNIEFVSANPTGPMH+GH R A+ GD LA+L+   GYEV REYYINDAGAQ++ L 
Sbjct: 121 NGKRVNIEFVSANPTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV+ RY++ L  N   +  G YPG+YLK +GK L  +Y S LL     +   I++D S+
Sbjct: 181 ESVYLRYKEVLGENIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +MK+I++DL  L I+HDIF SE    + +   ++  ++ L  +  +Y G L  PK  T
Sbjct: 240 MYLMKLIKEDLALLGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG-T 296

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                  R Q+LF+ST  GDDVDR L K+DGS+TYFA D+AY   K  RGF +MI  +GS
Sbjct: 297 EGINWKPRTQMLFKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGS 356

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRL+A   A+S+  A I++ L  +V    +G  +KMSKR+G+F+T++ V+++VG
Sbjct: 357 DHIGYVKRLKAAVKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF+ML RK+  +LDFDF KV EQSK NPVFYVQYA+AR  S+ R A  I   L+ +
Sbjct: 417 KDVVRFIMLTRKSDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIE 473

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V+         E+ LI  LA++  ++E +    EP+++ FYL ++A  FH  W +
Sbjct: 474 LVDFSVLS-----SKEEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGY 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++  +RF+  NN  LT  R+ L  +V  +I SGL I  +    EM
Sbjct: 529 GNKSTDMRFIVDNNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575


>gi|255020170|ref|ZP_05292239.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970312|gb|EET27805.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 580

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 202/610 (33%), Positives = 312/610 (51%), Gaps = 57/610 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A  +S L   L+++     +  ++ + + +ERP+  +HG L++N A++L++     P 
Sbjct: 1   MKAFVTSTLSVALQQLVESGAL-SRVPETLELERPKQASHGDLASNVALLLAKDARCKPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IVA +   P +    IAG GFIN +L P   ++++  +   G  +G +  G+G  
Sbjct: 60  ELAERIVAAMPASPHIARCEIAGPGFINFFLRPEAFQEVVRLVYAQGERFGAHDFGEGET 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +++EFVSANPTGP+HVGH R A  G +LA+L+ F GY V  EYY+NDAG Q++ LA SV+
Sbjct: 120 LHLEFVSANPTGPLHVGHGRGAAYGASLANLLRFCGYRVFCEYYVNDAGRQMDILAASVY 179

Query: 183 WRY-QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL----NFPEEKWLPI----- 232
            RY + A  +     P   Y G YL  +   L  ++   L     N P+           
Sbjct: 180 LRYLENAGLDLPWPYPSNAYRGDYLLPIAAALRREFGDRLTPAARNLPDLSRFEDADAAM 239

Query: 233 -----------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                            +    +  ++  IR+DL    + +D + SE      D   I  
Sbjct: 240 DALIQQLKTDLGPDYAPLHRAGLDTILADIREDLAEFGVHYDGWYSERSL--MDSGAITR 297

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            +++L   G+ Y                +    L FRST  GDD DR L + +G+YTYFA
Sbjct: 298 AVESLTAAGHTY----------------VQDGALWFRSTDYGDDKDRVLRRENGAYTYFA 341

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +D+AY   K+ RGF  ++ + G+DH GY+ R+ A   A+    A + +LL +   LYR  
Sbjct: 342 SDVAYHADKFARGFRQIVDMWGADHHGYIARVRASLRAMGLDDAALEILLVQFAILYRGA 401

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
             + MS RAG+F+TLR +  EVG+D+ RF  + R+  + LDFD    K+ S+ENPV+Y+Q
Sbjct: 402 EKVSMSTRAGEFVTLRQLRAEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVYYIQ 461

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR  S+FRQA++             V       D  EL L   L  +P  +  +  A
Sbjct: 462 YAHARVFSLFRQAEEQG----LSTPQAEVPDLSPLQDGRELALADLLWRFPEAVATSARA 517

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           +EP+++AFYL +LAS FH +++  R       +    R     RL L  AVA  I +GL 
Sbjct: 518 REPHQIAFYLKELASAFHTYYNATR-------ILVEERDTRHARLALARAVARTIANGLA 570

Query: 576 IIGVESPNEM 585
           ++GV +P  M
Sbjct: 571 LLGVSAPERM 580


>gi|303256429|ref|ZP_07342443.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859920|gb|EFL82997.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 581

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 187/600 (31%), Positives = 300/600 (50%), Gaps = 45/600 (7%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A   +++    K     +   +    +IV+ERP+  +HG ++   A+  ++ +   P 
Sbjct: 1   MLASQKTKITELFKNALAAVGAPENT--KIVLERPKQQSHGDIACTVALQCAKAMKQPPR 58

Query: 63  TIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IAE +V  +           ++ IAG GFINL L+P   + ++  I+  G  YG +   
Sbjct: 59  VIAEKLVEELRKETADSEMFSAIEIAGPGFINLKLAPFLKQDVVREILKEGPAYGCSDAH 118

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G  + +E+VSANPTGP+H+GH R   +GD L+ ++   G+ VTRE+Y NDAG QI+ LA
Sbjct: 119 TGESILLEYVSANPTGPLHLGHARQGALGDVLSRMLKSQGWAVTREFYYNDAGNQIHNLA 178

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPI 232
           +SV  R  + L N   + PE  Y G Y+  + ++   K          + +      L  
Sbjct: 179 ISVQARCYE-LQNKPFEFPEDGYKGAYVLDIAQDFLAKEPIHTFDGKVVESSGNPDDLEN 237

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ Y+V  + +    DL AL +  D +  E   +      +   +  +   G  YE    
Sbjct: 238 IRAYAVAYLREEQHKDLTALGVAFDNYYLESSLY--SDGRVAKAVQAIRNAGKTYE---- 291

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                         + L F+ST  GDD DR + K+DGSYTYF  D+AY   K+ERGF+  
Sbjct: 292 ------------KDRALWFKSTDYGDDKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRA 339

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEK------KAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           + + GSDH G V R+ A   A S        K     +L +++++ +DG P+KMSKR+G 
Sbjct: 340 LNIQGSDHHGTVARVRAGIQAASGDFGFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGT 399

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           ++TL  +V+ VG D+ R  M+ R+      FD      QS ENPV+Y+QYA+AR  S+F 
Sbjct: 400 YVTLSDLVNWVGKDAARLFMVNRRADAEFVFDVDLALSQSDENPVYYLQYAHARICSVFA 459

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           QA++   ++   +         S    +EL+L+  L+++P  + N T    P  L  YL 
Sbjct: 460 QAQEKGIEVP-SVEEMASEDLSSLTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLK 518

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           +LA+ FH  ++  R       V  ++ KL   RL L+ A   ++ +GL I+GV +P  +S
Sbjct: 519 ELAADFHSFYNAER-------VLVDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571


>gi|262371365|ref|ZP_06064683.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313702|gb|EEY94751.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 601

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 185/630 (29%), Positives = 309/630 (49%), Gaps = 74/630 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + L++ ++ +  +  +     +   + R +D +HG  ++N AMI S+  G+ 
Sbjct: 1   MN--TAIQAALEHAVQNLQAEGVLPADWNNSSTLTRTKDRSHGDFASNIAMIASKAAGMK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+A +    D+    IAG GFIN +L+      +L  I   G ++GR      
Sbjct: 59  PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQGNQFGRTQANAA 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EFVSANPT  +HVGH R A  G T+A+L+  +G  V REYY+NDAG Q++ LA S
Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGATVDREYYVNDAGRQMDILATS 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--------------KYSSELLNFPE 226
            + RY + L       P+  Y G Y+K + + + D              K   E + + E
Sbjct: 179 TYLRYLE-LTGQALVFPKNAYQGDYVKEIAQSIIDADGYAYVRPVADVYKDVPEDVQYAE 237

Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           E                              +   +    ++ A++  I+DDL    +  
Sbjct: 238 ELDAEGNKVVLSGDKEKHIDGLIHNSQSLIGEAYRVFHQAALNAILDDIKDDLGEFGVTF 297

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE          I + ++ L ++G++YE                    + F+ST  
Sbjct: 298 NQWFSEASL----TDKIDEALETLEQRGFLYE----------------KDGNIWFKSTEF 337

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + + +G  TYFA+D+AY   K +RG+ ++I + GSDH GY+ R++A   A+  
Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDIIDIWGSDHHGYISRVKAAIDALGY 397

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              ++ VLL + V L+R G  ++MS R+G F+TLR +  EVG+D+ RF  + RK+ + +D
Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           FD      QSK+N V+Y+QYA+AR   +   +A +    + FD               +E
Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNRMVDVKAPEKG--ISFDRSKVADYDATLLVLDAE 515

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +++  LA YP ++  A  + EP+++  YL +LA++FHG ++        R +   N  L
Sbjct: 516 TEILAKLAAYPEIVLRAANSYEPHQVGNYLKELAALFHGWYN----LDNTRIIDEQNIAL 571

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  RL L   V  ++ +GL ++GV +P  M
Sbjct: 572 SQARLLLSINVQQVLRNGLELLGVSAPEAM 601


>gi|331001441|ref|ZP_08325059.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329568170|gb|EGG49987.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 581

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 187/600 (31%), Positives = 300/600 (50%), Gaps = 45/600 (7%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A   +++    K     +   +    +IV+ERP+  +HG ++   A+  ++ +   P 
Sbjct: 1   MLASQKTKITELFKNALAAVGAPENT--KIVLERPKQQSHGDIACTVALQCAKAMKQPPR 58

Query: 63  TIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IAE +V  +           ++ IAG GFINL L+P   + ++  I+  G  YG +   
Sbjct: 59  VIAEKLVEELRKETADSEMFSAIEIAGPGFINLKLAPFLKQDVVREILKEGPAYGCSDAH 118

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G  + +E+VSANPTGP+H+GH R   +GD L+ ++   G+ VTRE+Y NDAG QI+ LA
Sbjct: 119 TGESILLEYVSANPTGPLHLGHARQGALGDVLSRMLKSQGWAVTREFYYNDAGNQIHNLA 178

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPI 232
           +SV  R  + L N   + PE  Y G Y+  + ++   K          + +      L  
Sbjct: 179 ISVQARCYE-LQNKPFEFPEDGYKGAYVLDIAQDFLAKKPIHTFDGKVVESSGNPDDLEN 237

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ Y+V  + +    DL AL +  D +  E   +      +   +  +   G  YE    
Sbjct: 238 IRAYAVAYLREEQHKDLTALGVAFDNYYLESSLY--SDGRVAKAVQAIRNAGKTYE---- 291

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                         + L F+ST  GDD DR + K+DGSYTYF  D+AY   K+ERGF+  
Sbjct: 292 ------------KDRALWFKSTDYGDDKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRA 339

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEK------KAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           + + GSDH G V R+ A   A S        K     +L +++++ +DG P+KMSKR+G 
Sbjct: 340 LNIQGSDHHGTVARVRAGIQAASGDFGFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGT 399

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           ++TL  +V+ VG D+ R  M+ R+      FD      QS ENPV+Y+QYA+AR  S+F 
Sbjct: 400 YVTLSDLVNWVGKDAARLFMVNRRADAEFVFDVDLALSQSDENPVYYLQYAHARICSVFA 459

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           QA++   ++   +         S    +EL+L+  L+++P  + N T    P  L  YL 
Sbjct: 460 QAQEKGIEVP-SVEEMASEDLSSLTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLK 518

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           +LA+ FH  ++  R       V  ++ KL   RL L+ A   ++ +GL I+GV +P  +S
Sbjct: 519 ELAADFHSFYNAER-------VLVDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571


>gi|145295319|ref|YP_001138140.1| arginyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166232781|sp|A4QDE1|SYR_CORGB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|140845239|dbj|BAF54238.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 550

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 185/582 (31%), Positives = 304/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+    +++  +L +++V+ERPR+  HG  +TN A+ +++ +G +P  
Sbjct: 4   ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +  D  +DS  IAG GF+N+ L+ +   +I++ I+  G  +G +       V
Sbjct: 64  LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K + + + +K+  E L         + +   V+ M +
Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKH-PEALALEPAATQELFRAEGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYEN-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K+ RG +  IY++G+DH GY
Sbjct: 281 --EGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+  K   + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A+ +   +  +    +
Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLG--VTEEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V++ A   +EP+++A Y  +LA  FH  +      P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A    + + L+++GV +P +M
Sbjct: 512 K---ADEDTAPIHSARLALAAATRQTLANALHLVGVSAPEKM 550


>gi|283768735|ref|ZP_06341646.1| arginine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104521|gb|EFC05894.1| arginine--tRNA ligase [Bulleidia extructa W1219]
          Length = 552

 Score =  516 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 180/583 (30%), Positives = 304/583 (52%), Gaps = 32/583 (5%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            +     +   L++    I   +     +++E PRD + G  STN AM L++ L   P+ 
Sbjct: 1   MSQIQETIIKALEKSVNHIFQIQPEAGLLMVEEPRDRSKGDYSTNVAMRLAKVLHKAPIV 60

Query: 64  IAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE +V  +K   P+  S+     GFIN  +    L +I++S++ +G +YG N  G G  
Sbjct: 61  IAEELVNDLKNTLPEASSIEFVKPGFINFRIKREVLFEIINSVLKAGDKYGENTSGAGKN 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +E+VSANPTG +H GH R A  GD +++L+  SGY   RE+YINDAG QI+ L  S+ 
Sbjct: 121 ILVEWVSANPTGDLHCGHARNAAWGDCISNLLEKSGYNCLREFYINDAGHQIDMLGESLV 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            RY + L   D  LPE  Y    +K++ KE+ ++   + L    ++ L   K    +  +
Sbjct: 181 ARYFEWL-GKDYPLPEDGYHAEDVKNIAKEILEEEGDKWLETDPKERLEHFKLVGKKKEL 239

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K I  DL    +    ++ E  F+  +   I  ++D + +    YE              
Sbjct: 240 KKIERDLALYRVHFQSWMPESFFYENNMERINAVLDKMDKMNLTYE-------------- 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 L F++T  GDD DR L KSDGS +Y   D+A    K ERG+++++ + G+DH  
Sbjct: 286 --KDGALWFKATEYGDDKDRVLRKSDGSLSYLTPDIANHVYKVERGYEHLVNLWGADHHS 343

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV R++    A+   +  ++V + ++VR+  DG  +KMSKR G+ ITLR + ++VG D+ 
Sbjct: 344 YVTRMKLALKALGYPEGTLDVDIIQMVRMVEDGQEVKMSKRTGNAITLRELCEDVGVDAA 403

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+  + +  +  +DFDF   +++   NPV+Y QYAY R  SI R+ +D+      D F R
Sbjct: 404 RWFFVAKDVASHMDFDFNLARKKDNNNPVYYCQYAYTRMSSILRK-EDLPAFKPTDDFSR 462

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    +  EL L+  ++E+P+++ +A   ++P K+  Y+ DLA  +H ++   + N
Sbjct: 463 -------LTNEKELYLMKLMSEFPKLVADAARLRKPNKVTEYILDLAKTYHSYYGMAKVN 515

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   ++ +LT  R+ L+ A+   + +   ++GVE+  +M
Sbjct: 516 ------NLDDPELTNQRIGLLKALQITLKNAFALVGVEALEQM 552


>gi|58617231|ref|YP_196430.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58416843|emb|CAI27956.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 601

 Score =  516 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 243/587 (41%), Positives = 353/587 (60%), Gaps = 14/587 (2%)

Query: 1   MYLFADFSSRLKNYLK--EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +       +   L    ID  +   + IL +++++ P +  HG L TNAA+ILS+ + 
Sbjct: 26  MSVACTIRRHIIEKLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIK 85

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P+ IA+++V       ++  + +   GFIN  +S     +I+ SI     ++G    G
Sbjct: 86  KNPMDIAKILVDEFSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFG 145

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +VNIEFVSANPTGPMH+GH R A+ GD LA+L+   GYEV REYYINDAGAQ++ L 
Sbjct: 146 NGKRVNIEFVSANPTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLV 205

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV+ RY++ L  N   +  G YPG+YLK +GK L  +Y S LL     +   I++D S+
Sbjct: 206 ESVYLRYKEVLGENIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSL 264

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +MK+I++DL  L I+HDIF SE    + +   ++  ++ L  +  +Y G L  PK  T
Sbjct: 265 MYLMKLIKEDLALLGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG-T 321

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                  R Q+LF+ST  GDDVDR L K+DGS+TYFA D+AY   K  RGF +MI  +GS
Sbjct: 322 EGINWKPRTQMLFKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGS 381

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRL+A   A+S+  A I++ L  +V    +G  +KMSKR+G+F+T++ V+++VG
Sbjct: 382 DHIGYVKRLKAAVKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVG 441

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF+ML RK+  +LDFDF KV EQSK NPVFYVQYA+AR  S+ R A  I   L+ +
Sbjct: 442 KDVVRFIMLTRKSDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIE 498

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V+         E+ LI  LA++  ++E +    EP+++ FYL ++A  FH  W +
Sbjct: 499 LVDFSVLS-----SKEEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGY 553

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++  +RF+  NN  LT  R+ L  +V  +I SGL I  +    EM
Sbjct: 554 GNKSTDMRFIVDNNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 600


>gi|57239219|ref|YP_180355.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579177|ref|YP_197389.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81352891|sp|Q5HB39|SYR_EHRRW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57161298|emb|CAH58219.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417803|emb|CAI27007.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 576

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 244/587 (41%), Positives = 353/587 (60%), Gaps = 14/587 (2%)

Query: 1   MYLFADFSSRLKNYLK--EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +       +   L    ID  +   + IL +++++ P +  HG L TNAA+ILS+ + 
Sbjct: 1   MSVACTIRRHIIEKLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIK 60

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P+ IA+++V       ++  + +   GFIN  +S     +I+ SI     ++G    G
Sbjct: 61  KNPMDIAKILVDEFSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +VNIEFVSANPTGPMH+GH R A+ GD LA+L+   GYEV REYYINDAGAQI+ L 
Sbjct: 121 NGKRVNIEFVSANPTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQIDVLV 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV+ RY++ L  N   +  G YPG+YLK +GK L  +Y S LL     +   I++D S+
Sbjct: 181 ESVYLRYKEVLGENIV-IGSGLYPGLYLKDIGKLLYQEYDSGLLGMDYSQRRRIIRDVSL 239

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +MK+I++DL  L I+HDIF SE    + +   ++  ++ L  +  +Y G L  PK  T
Sbjct: 240 MYLMKLIKEDLALLGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG-T 296

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                  R Q+LF+ST  GDDVDR L K+DGS+TYFA D+AY   K  RGF +MI  +GS
Sbjct: 297 EGINWKPRTQMLFKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGS 356

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYVKRL+A   A+S+  A I++ L  +V    +G  +KMSKR+G+F+T++ V+++VG
Sbjct: 357 DHIGYVKRLKAAVKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D VRF+ML RK+  +LDFDF KV EQSK NPVFYVQYA+AR  S+ R A  I   L+ +
Sbjct: 417 KDVVRFIMLTRKSDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIE 473

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   +V+         E+ LI  LA++  ++E +    EP+++ FYL ++A  FH  W +
Sbjct: 474 LVDFSVLS-----SKEEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEIAEAFHALWGY 528

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G ++  +RF+  NN  LT  R+ L  +V  +I SGL I  +    EM
Sbjct: 529 GNKSTDMRFIVDNNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575


>gi|325963846|ref|YP_004241752.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469933|gb|ADX73618.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 554

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 197/584 (33%), Positives = 310/584 (53%), Gaps = 38/584 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S  +   LK+      +      + D + +ERP++  HG  +TN A+ L++  G +P 
Sbjct: 5   ELSLAISACLKDAVAAGDIALPASAVPDEVRVERPKNRDHGDWATNIALQLAKQAGTNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A ++  R+K    V +V IAG GF+N+ +  +    +  +IV +G EYG N    G  
Sbjct: 65  EFATVLSTRLKAIEGVAAVDIAGPGFLNITVDAAAAGALAKAIVEAGKEYGTNSALAGHT 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R A +GD++A ++  SG +VT EYYINDAG Q+N  A SV+
Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDSIARVLRASGADVTAEYYINDAGTQMNVFAHSVY 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R           +P+G YPG Y+  +G E+  ++   +    E   +P+++  + QA M
Sbjct: 185 NRLHGL------PVPDGGYPGQYIADLGHEVLAEHPD-IRELTEVAAVPVIRAAAYQAQM 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K I+  L    ++ D+F SE + H  D   I   +  L  QG+V++              
Sbjct: 238 KDIKSTLADFGVEFDVFFSEQELH--DAGAIESAVARLREQGHVFD-------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D   +  R+T  GDD DR L++++G  TYFAAD AY+  K +RGF   IY++G+DH G
Sbjct: 282 --DGGAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHG 339

Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           Y+ RL+A+AAA  +     I VL+ +LV +       K+SKRAG+ I L+ ++D +G D+
Sbjct: 340 YINRLKAIAAAAGDDPEVHIEVLIGQLVSV----NGAKLSKRAGNIIELKDLIDWLGKDA 395

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VR+ +        L  D   +K+ S ENPVFYVQYA+AR R   R A     D   D   
Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGAARNAVAAGVDRQVD--G 453

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           ++          +E +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   R 
Sbjct: 454 KDSFDASLLDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRI 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P           +   RL L  A + ++ +GL+++GV +P  M
Sbjct: 514 APMG---DEAVTDVNRTRLWLNDATSQVLANGLDLLGVSAPERM 554


>gi|319764740|ref|YP_004128677.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330826956|ref|YP_004390259.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317119301|gb|ADV01790.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329312328|gb|AEB86743.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 567

 Score =  515 bits (1326), Expect = e-143,   Method: Composition-based stats.
 Identities = 181/593 (30%), Positives = 296/593 (49%), Gaps = 50/593 (8%)

Query: 12  KNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +  L  +  +++ +      R   E P+  AHG L+  AAM L++PL  +P  + E + A
Sbjct: 6   QELLAALAGELERLSPGASSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLKA 65

Query: 71  RIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  P     VD + IAG GF+N+ L  +  ++++  ++  G  +G     +G KV +E
Sbjct: 66  ALEATPAFAQWVDVIEIAGPGFLNIRLKNAAKQQVVREVLAQGTRFGMQPA-RGEKVLVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD +++L A  G++V RE+Y NDAG QI+TL  S   R +
Sbjct: 125 FVSANPTGPLHVGHGRQAAIGDAISNLYATQGWQVHREFYYNDAGVQIDTLTKSTQLRAK 184

Query: 187 QALYNND-------SDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVK 234
                +D       + L + +Y G Y++ +      K              + +    ++
Sbjct: 185 GFKPGDDCWPTDADNPLAKNFYNGDYIQDIANAFLAKATVKADDRAFTANGDVEDYDNIR 244

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            ++V  +      DL+A N++ D +  E   +      +   +  L   G  YE      
Sbjct: 245 QFAVAYLRNEQDKDLQAFNLRFDEYYLESSLYAN--GHVDATVARLIANGKTYE------ 296

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                         L  RST  GDD DR + K DGSYTYF  D+AY   K++RGF  ++ 
Sbjct: 297 ----------QDGALWLRSTDYGDDKDRVMRKQDGSYTYFVPDVAYHIQKWQRGFRKVVN 346

Query: 355 VMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + G+DH G + R+ A   A  V   +   + +L  +VR+ R G  +K+SKRAG ++TLR 
Sbjct: 347 IQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRD 406

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++    D+VRF +L RK      FD      Q+ +NPV+YVQYA+AR  S+ R  ++  
Sbjct: 407 LIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWRE-- 464

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D D+     +            L++ LA+YP ++  A     P+ + FYL DLA+ +
Sbjct: 465 ---DCDVGALTDVDLSPLEGPQAQALMLLLAKYPEMLAAAAAGNAPHDVTFYLRDLAAAY 521

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H ++   R       +  ++  + + RL LV A A ++++GL ++GV +P  M
Sbjct: 522 HSYYDAER-------ILVDDEPVRLARLALVAATAQVLHNGLAVLGVSAPARM 567


>gi|433534|emb|CAA79710.1| arginyl-tRNA synthetase [Corynebacterium glutamicum]
          Length = 550

 Score =  515 bits (1326), Expect = e-143,   Method: Composition-based stats.
 Identities = 185/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD ++ +K    E+    +++  +L +++V+ERPR+  HG  +TN A+ +++ +G +P  
Sbjct: 4   ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +  D  +DS  IAG GF+N+ L+ +   +I++ I+  G  +G +       V
Sbjct: 64  LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+G  R A VGD+L  ++  SG +VTREYY ND G QI+  ALS+  
Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +          PE  Y G Y+K + + + +K+  E L         + +   V+ M +
Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKH-PEALALEPAATQELFRAEGVEMMFE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I+  L       D++  E+     +   +   +  L   G +YE               
Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYEN-------------- 280

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   RST  GDD DR ++KSDG   Y A D+AY   K+ RG +  IY++G+DH GY
Sbjct: 281 --EGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + RL+A AAA+  K   + VL+ ++V L RDG  ++MSKRAG  +TL  +V+ +G D+ R
Sbjct: 339 IARLKAAAAALGYKPEDVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++       LD D    + QS +NPV+YVQY +AR  SI R+A+ +   +  +    +
Sbjct: 399 YSLIRSSVDSSLDMDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLG--VTEEGADLS 456

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  + E D     LI  L E+P V++ A   +EP+++A Y  +LA  FH  +      P
Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHILP 511

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      +   +   RL L  A    + + L ++GV +P +M
Sbjct: 512 K---ADEDTAPIHTARLALAAATRQTLANALRLVGVSAPEKM 550


>gi|170698554|ref|ZP_02889624.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170136559|gb|EDT04817.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 593

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVTQVAHALKGADSAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++   G  +G +   
Sbjct: 67  QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    +   L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSPQAVSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|169334677|ref|ZP_02861870.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257415|gb|EDS71381.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM
           17244]
          Length = 557

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 185/585 (31%), Positives = 301/585 (51%), Gaps = 40/585 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVE--KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
            +    + N + +   +  +E  K+ + +I +E PR+   G  S N AM L++    +P 
Sbjct: 9   KEIIKLVDNAIDKCIEQGLLEIKKEDVPQIRVEVPREEKFGDFSVNTAMQLAKAARCNPR 68

Query: 63  TIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IAE I+  I   +  V  + IAG GFIN  L   +L   L  ++    +YG+ +     
Sbjct: 69  IIAENIIKNIDTKNSYVKDISIAGAGFINFTLDNKWLYDELKKVITLKDKYGKIVEENPK 128

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +VN+E+VSANPTGP+H+G+ R   +GD +++++ ++G +VT+E+Y+NDAG QI     S+
Sbjct: 129 RVNVEYVSANPTGPLHIGNARGGAIGDVISNILTWAGCDVTKEFYLNDAGNQIIKFGESL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY Q L   D + PE  Y G  +  + K   ++   +LLN  EE+    + +YS+   
Sbjct: 189 EARYLQEL-GKDVEFPEDGYKGEDITDLAKSYIEENGDKLLNVSEEERQSELVEYSLDKN 247

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  + +DLK   I +D+F SE   H  +   I D+I  +   G VY+             
Sbjct: 248 VSNMVNDLKDYGIDYDVFFSERTLH--NSGAIDDVISKMKNDGSVYK------------- 292

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
                  L F+ T  G + D  L++ +G  TY+AAD+AY   K  +R FD  I V G+DH
Sbjct: 293 ---KEGALWFKGTEYGLEKDEVLIRQNGVPTYYAADIAYHYDKLVKRNFDYAINVWGADH 349

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V RL+    A+   + +++V+L +LV L ++   ++MSKR G+  TL  +V EVG D
Sbjct: 350 HGHVARLKKAMVALGVNEDRLDVILMQLVHLVKNNEALRMSKRKGNIYTLSDLVGEVGKD 409

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           + RF+  + K +  +DFD     +QS +NPVFYVQYA+AR  SI R         + +L 
Sbjct: 410 AARFVFNYNKPNTHMDFDLDLAIKQSSDNPVFYVQYAHARICSIIRNIGKEVKAENLELL 469

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            +            E+ L+  ++ +   I  A+   +P K+  Y  DLA  FH  ++  R
Sbjct: 470 NKK----------EEINLLKVISNFSDEILKASNDLDPSKITKYAMDLAGSFHSFYNAHR 519

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  V  ++  L   RL LV A  +++ + L+I+GV +  +M
Sbjct: 520 -------VIVDDEDLMNARLALVTATRNVLKNTLDILGVSALEKM 557


>gi|300112762|ref|YP_003759337.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299538699|gb|ADJ27016.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 585

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 194/618 (31%), Positives = 303/618 (49%), Gaps = 80/618 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           + +   L  +  +  +     DRI ++R RD +HG  ++N  M+L++     P  +A+LI
Sbjct: 7   NLIAAALSSLQQEGILSSWDKDRIQVQRTRDKSHGDFASNIPMVLAKEARQKPQKLADLI 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           VAR+   P V  V IAG GFIN  L+    + ++S I+     +GR   G+G  V++EFV
Sbjct: 67  VARLPEHPWVKKVDIAGPGFINFTLALPAFQAVVSQILEQKEFFGRCQTGQGKTVHLEFV 126

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+HVGH R A  GD LA L+   GY+V REYY+NDAG Q++ LA+SV+ RY + 
Sbjct: 127 SANPTGPLHVGHGRGAAYGDALARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE- 185

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSS---------------ELLNFPEEKWLP-- 231
           L       P   Y G Y+ ++G+ L  +                  +      EK+L   
Sbjct: 186 LCGETLPFPSNGYQGEYVCNIGQYLKIEEGDLPHHSAKEILAGLPADAPEGDREKYLDAL 245

Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                          V + ++  ++  IR+DL   N+ +D + SE    +     ++  I
Sbjct: 246 ILKMKNLLGKNNYRKVFEQALNTILAGIREDLAKFNVTYDEWFSERQLTKM--GMVKIAI 303

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           + L   GY+Y+                      FR+T  GD+ DR +++ +G  TYFA+D
Sbjct: 304 ERLKAAGYLYQ----------------KDGAWWFRATNFGDEKDRVVIRENGQPTYFASD 347

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K ERG+  +I V G+DH GY+ R++A   A+     Q +V L +   LYR    
Sbjct: 348 IAYHLNKLERGYHKIIDVWGADHHGYIPRIKASLQALGADLQQFDVRLVQFAILYRGKEK 407

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           I+MS R+G+F+TLR +  EVG D+ RF  + R   + +DFD    K QS ENPV+YVQYA
Sbjct: 408 IQMSTRSGEFVTLRELCQEVGKDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYA 467

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+F Q K      + +   +++       ++ E+ L+  L+ Y  V+E A     
Sbjct: 468 HARICSVFHQLKAREFVWNSEQGRKHLG---KLNESHEVTLLDRLSCYSEVVEGAATQSA 524

Query: 518 PY----------KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           P+          +           FH +++             +  +L   RL L+ A  
Sbjct: 525 PHLLAYYLLDLAR----------DFHTYYNAHTF-------LVDTPELRDARLALIAATR 567

Query: 568 SIINSGLNIIGVESPNEM 585
            +I +GL ++GV +P  M
Sbjct: 568 QVIKNGLTLLGVSAPESM 585


>gi|328955732|ref|YP_004373065.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456056|gb|AEB07250.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 617

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 186/633 (29%), Positives = 304/633 (48%), Gaps = 74/633 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++  +        +    L+   +ERP D ++G  ++  A+  ++  G+ P   AE
Sbjct: 5   IENLVREAVIAAQSAGDLPAFALEDCGVERPADTSNGEWTSTVALRSAKAAGIAPRAFAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
             +A ++IDP ++ V IAG GFIN YLS      + +     G ++ R+  G G ++ +E
Sbjct: 65  AAIAHMRIDPSIERVEIAGPGFINFYLSTGERNAVFARAREQGADFARSSAGAGIRLQVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANP GP+H+GH R A +GD+L+ +M  +GY+V REYY+ND G Q++    S+  RY 
Sbjct: 125 FVSANPVGPLHIGHGRWAALGDSLSRVMEHAGYDVEREYYVNDHGNQMDVFGSSISMRYM 184

Query: 187 QA-------------------------LYNNDSDLPEGY--------------YPGVYLK 207
           Q                          + ++  + PE +              Y G Y+ 
Sbjct: 185 QLVDIVNKRGVGLETAVQLLSADRDAYIRDDSDEHPELHPYSDRFIDALGANSYGGEYII 244

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +L  +         E + +   ++   + M+  IRD    +    D++ SE   + 
Sbjct: 245 ETAADLFRRDGDAWAGASESERMSAFREQGHRKMLDEIRDLCHDVRCDFDVWFSERSLYE 304

Query: 268 G-------DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
                     S +      L   GY+YE                    + FRST +GDD 
Sbjct: 305 KATTGPDAGTSAVDRAFARLREMGYIYESA----------------GAVWFRSTDLGDDK 348

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+K++G YTYFA+D+AY   K++R  D+ I + GSDH GY+ R+ A   A+     +
Sbjct: 349 DRVLVKANGDYTYFASDVAYHWDKFQR-VDHAIDIWGSDHHGYIGRVRAACDALGY-PGR 406

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             VLL +LV L R G P++MSKR G  +T R +VDEVG+D+ R+ ++ R  ++ +DFD  
Sbjct: 407 FEVLLGQLVNLLRSGKPVRMSKRKGTMVTFRELVDEVGADATRYTLISRSANQTIDFDID 466

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDI--------FPDLDFDLFPRNVIPQESEFD 492
            VKE+S +NPV+YVQYA+AR  SI R+A  +          D        + +      D
Sbjct: 467 AVKERSMDNPVYYVQYAHARICSILRRAAGVDDKQAALLGMDAVAARSIGDRVDYALLTD 526

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +E  L   L+E   ++ +    + P++L  +  +LA+ FH  +   +  P     +  +
Sbjct: 527 PTEFALSRKLSELEELVVSCARDRAPFRLTHFAEELAADFHSFYGACQVLPS--ETRPVD 584

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L+  RL    AV S+++  L +IGV +P  M
Sbjct: 585 AELSRARLAACDAVRSVLSLVLGLIGVSAPESM 617


>gi|163840172|ref|YP_001624577.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|189083543|sp|A9WNA7|SYR_RENSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|162953648|gb|ABY23163.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 549

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 186/585 (31%), Positives = 309/585 (52%), Gaps = 43/585 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + S  L   LK      ++    + +   + +ERP++  HG  +TN A+ L++P GL+P
Sbjct: 4   DELSVALTACLKAAVEAGELVVPTEAVPAEVRVERPKNRDHGDWATNIALQLAKPAGLNP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AE++ +R++    V +V IAG GF+N+ L  +    +  +IV +G +YG N    G 
Sbjct: 64  RAVAEILKSRLEAIEGVAAVDIAGPGFLNITLDAAAAGALAKNIVHAGSQYGENQALTGQ 123

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+ H R A VGD++A L+  SG  VT EYYINDAG+Q+N    SV
Sbjct: 124 VINVEFVSANPTGPLHLAHTRWAAVGDSVARLLKASGATVTSEYYINDAGSQMNNFGASV 183

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               +          PEG YPG Y+  + +++   +   +    +E  LP+V+  +  A 
Sbjct: 184 LAAIK------GEPTPEGGYPGAYITELAQQVVRDH-PYVTELTDEAALPVVRAAAYLAQ 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I++ L    +  D+F SE + H      +   +D L  QG+V+              
Sbjct: 237 LADIKETLNDFGVHFDVFFSEQELH--STGAVEKAVDRLRGQGHVFY------------- 281

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +  R+T   DD DR L++++G  TYFAAD AY+  K +RGF   IY++G+DH 
Sbjct: 282 ---QDGAIWLRTTDFTDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFVEKIYLLGADHH 338

Query: 362 GYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           GY+ RL+A+AA   +  A+ I VL+ ++V +       ++SKRAG+ + LR +++ +G+D
Sbjct: 339 GYIGRLKAIAACAGDDPARNIEVLIGQMVSV----NGARLSKRAGNIVELRDLLNWLGAD 394

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++R+ +        L  +  ++++ S +NPVFYVQYA+AR +++ R A+    D      
Sbjct: 395 ALRYSLGRSPADSPLALEPEQLQKASNDNPVFYVQYAHARTKAVDRNAEAAGVD------ 448

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            R+          +E  L+  L  +P V+  A   +EP+++A +L  +A  +H  +   R
Sbjct: 449 -RSAFEASLLTHPTESNLLAQLGAFPSVVAEAAKFREPHRVARHLEVVAGTYHRWYDACR 507

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             P   F       L   RL L  A   ++ +GL+++GV +P  M
Sbjct: 508 VTP---FAGEEITDLNRTRLWLNDATGQVLANGLDLLGVSAPERM 549


>gi|107023852|ref|YP_622179.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690937|ref|YP_836560.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170734267|ref|YP_001766214.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254247060|ref|ZP_04940381.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184]
 gi|123071911|sp|Q1BT49|SYR_BURCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232763|sp|A0KAZ0|SYR_BURCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238688616|sp|B1JZC6|SYR_BURCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|105894041|gb|ABF77206.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116649026|gb|ABK09667.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124871836|gb|EAY63552.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184]
 gi|169817509|gb|ACA92092.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 593

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 197/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL LS +  + +++++   G  +G +   
Sbjct: 67  QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                  L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|220913103|ref|YP_002488412.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254782940|sp|B8HB09|SYR_ARTCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219859981|gb|ACL40323.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 554

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 196/584 (33%), Positives = 311/584 (53%), Gaps = 38/584 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S  +   LK+     ++   E  + + + +ERP++  HG  +TN A+ L++  G +P 
Sbjct: 5   ELSLAISACLKDAVAAGEIALAESAVPEDVRVERPKNRDHGDWATNIALQLAKQAGTNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A ++ AR+K    V +V IAG GF+N+ +  +    +  +IV +G +YG N    G  
Sbjct: 65  EFATILSARLKTISGVSAVDIAGPGFLNITVDAAAAGALAKAIVEAGTQYGTNTALAGHT 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R A +GD +A ++  SG +VT EYYINDAG+Q+NT A SV+
Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDAIARVLRASGADVTAEYYINDAGSQMNTFANSVY 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R           +PEG YPG Y+  +G E+   +   +    E   LP+++  + +A M
Sbjct: 185 SRLHGL------PVPEGGYPGQYIADLGHEVLTAHPD-IRELTEVAALPVIRAAAYEAQM 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K I+  L    +  D+F SE + H  D   I   +  L  QG+V++              
Sbjct: 238 KDIKATLADFGVAFDVFFSEQELH--DAGAIESAVARLREQGHVFD-------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D   +  R+T  GDD DR +++++G  TYFAAD AY+  K +RG+   IY++G+DH G
Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGYTEKIYLLGADHHG 339

Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           Y+ RL+A+AAA  +     I VL+ +LV +       K+SKRAG+ I L+ ++D +G D+
Sbjct: 340 YIHRLKAIAAAAGDDPEVNIEVLIGQLVSV----NGAKLSKRAGNIIELKDLIDWLGKDA 395

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VR+ +        L  D   +K+ S ENPVFYVQYA+AR R   R A     +   D   
Sbjct: 396 VRYSLARFPADSPLTLDPELLKKNSNENPVFYVQYAHARSRGAARNAVAAGVERQVDGAD 455

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                       +E +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   R 
Sbjct: 456 SFDASL--LDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEAIAGAYHRWYDACRI 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P     +     +   RL L  A + ++ +GL+++GV +P  M
Sbjct: 514 APMG---EEAVTDVNRTRLWLNDATSQVLANGLDLLGVSAPERM 554


>gi|172061871|ref|YP_001809523.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689136|sp|B1YNQ7|SYR_BURA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171994388|gb|ACB65307.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 593

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++   G  +G +   
Sbjct: 67  QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRK 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    +   L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLAQLTSPQAVSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|78067731|ref|YP_370500.1| arginyl-tRNA synthetase [Burkholderia sp. 383]
 gi|109894977|sp|Q39CG0|SYR_BURS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77968476|gb|ABB09856.1| arginyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 593

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 196/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAT-----VAPVITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL LS +  + +++++   G  +G +   
Sbjct: 67  QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDFLNGETVAASDGEPVKGTGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + R+G  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMREGQEVKISKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                  L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|320094246|ref|ZP_08026048.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978824|gb|EFW10365.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 559

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 200/588 (34%), Positives = 307/588 (52%), Gaps = 41/588 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + +S ++  L +     +V      I D + +ERPR+  +G  STNAAM L++  G  P 
Sbjct: 5   ELASLIRAVLLDAAADGRVALGPSDIPDPVRVERPRNRDNGDWSTNAAMQLAKRAGTAPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A LI   +     V+SV +AG GFIN+ L+ S   ++ ++IV +G  YG N    G  
Sbjct: 65  DLAALIADALADAEGVESVEVAGPGFINIRLAASSAGQLAATIVEAGDSYGTNASLAGQD 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA LM  SG  VTREYY ND G+QI+  A S++
Sbjct: 125 INLEYVSANPTGPVHLGGARWAAVGDSLARLMTASGARVTREYYFNDHGSQIDRFARSLY 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238
            R          + PE  Y G Y+  +   +     +    + +  PEE+ +   +   V
Sbjct: 185 ARAL------GREAPEDGYGGQYIADIADRVRADARAAGLPDPVGLPEEEAVEAFRARGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I+  L A   + D+F  ED  H  D   +   I+ L  +G V++          
Sbjct: 239 ELMFAEIKARLSAFRSEFDVFFHEDSLH--DSGAVSAAIETLRGRGEVFD---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     +  R+T  GDD DR L+KSDG   YFAAD+AY+  K  RG D  +Y++G+
Sbjct: 287 ------RDGAVWLRTTSYGDDKDRVLIKSDGQAAYFAADVAYYLDKRRRGADAAVYLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  ++    + +L+ ++V L +DG P++MSKRAG  +TL  +VD V
Sbjct: 341 DHHGYIGRMMAMCAAFGDEPGVNMQILIGQMVNLVKDGAPVRMSKRAGTIVTLDDLVDAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       LD D   + + + +NPV+YVQYA+AR R++ R A D     D 
Sbjct: 401 GVDAARYALVRVSMDSNLDIDLDLLTQHTNDNPVYYVQYAHARTRNVARNAADHGVGRDA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +            +L+  LA++P  I  A   +EP+++A YL  LA  +H  + 
Sbjct: 461 GFDPAALDTAADA------ELLGALAQFPAQIAQAAQLREPHRVARYLEALAGTYHAWYG 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  PR            + RL L  AV+ ++ +GL ++GV +P  M
Sbjct: 515 QCRVTPRG---DDPVEAGHVARLWLNDAVSQVLRTGLGLLGVAAPERM 559


>gi|270284697|ref|ZP_05966509.2| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276344|gb|EFA22198.1| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 631

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 185/619 (29%), Positives = 314/619 (50%), Gaps = 71/619 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  + +  K +     VE   +++  + RP+D AHG  ++NAAM L++  G+ P  +A
Sbjct: 45  ELSQLMYDTAKALVPA-DVELPPVEKFSVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLA 103

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E  V +++  P + SV +AG GFIN+ L  +    ++  ++  G  +G+N    G  +N+
Sbjct: 104 EQFVEKLQDVPGIASVEVAGPGFINITLDSASAAAVVDQVLAQGSAFGKNTHLGGKTLNL 163

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S+    
Sbjct: 164 EFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVIREYYFNDHGEQINRFAKSLVAAA 223

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELLNFPE 226
            +         P   Y G Y+  + + +  + ++                   E L   +
Sbjct: 224 HE------ETTPVDGYKGAYIDEIARRVIAEANADGVDILNLPRVDGGTDEHGEPLGEGD 277

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            +     +  +V  M   I+  +K   +  D++  E+  +  +   +   I +L  +G +
Sbjct: 278 SEQREEFRKRAVPMMFDEIQQSMKNFRVNFDVWFHENSLY--EDGEVDKAIADLRARGDI 335

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           +E                      F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  
Sbjct: 336 FE----------------KDGATWFASTKHGDDKDRVIIKSDGNYAYFAADVAYYRNKRH 379

Query: 347 RG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSK 402
           R     D  IY++G+DH GY+ R+ A+ AA  ++  Q + +L+ +LV + +DG P++MSK
Sbjct: 380 REEGSADVAIYMLGADHHGYIGRMMAMCAAYGDEPGQHMQILIGQLVNVMKDGKPVRMSK 439

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           RAG+ +T+  +VD +G D+ R+ +     +  +D D   +   S ENPV+YVQYA+AR  
Sbjct: 440 RAGNIVTIDDLVDAIGVDASRYSLARTDYNSPVDIDLDLLASHSNENPVYYVQYAHARSC 499

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           ++ R A +     D      ++   ++E D    ++I  LA++P V+  A   + P+++A
Sbjct: 500 NVDRNAAEAGITTDG----ADLALLDTEADG---EVIAALAQWPGVLAEAGDKRAPHRVA 552

Query: 523 FYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQLVHAV 566
            YL DLA+ +H  ++  R  P                 LR  +         RL+L  AV
Sbjct: 553 HYLEDLAAAYHKWYNVERVVPMGLTDPEQHLDTQAAEALRIAKNPEPARAAARLKLNDAV 612

Query: 567 ASIINSGLNIIGVESPNEM 585
             +I +GL+++GV +P++M
Sbjct: 613 QQVIVNGLDLLGVSAPDKM 631


>gi|188590897|ref|YP_001795497.1| arginyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692922|sp|B2AG76|SYR_CUPTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170937791|emb|CAP62775.1| ARGINYL-tRNA SYNTHETASE (ARGININE--tRNA LIGASE) PROTEIN
           [Cupriavidus taiwanensis LMG 19424]
          Length = 595

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 195/615 (31%), Positives = 295/615 (47%), Gaps = 64/615 (10%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S L     +    +      L  +  ERP+  AHG L+ N AM ++R L  +P  +A+ I
Sbjct: 7   SNLAAAFTDAVRALAPADATLPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRI 66

Query: 69  VARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           VA ++ D      V  + IAG GFINL L+PS    +L +++  G  YG    G   +V 
Sbjct: 67  VAAVEADARAQGLVAGMDIAGPGFINLRLTPSAKADVLRAVLNEGDHYGARERGVHGQVL 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV  R
Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR 186

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238
            +  L   D+  PE  Y G Y+  +  +              +      + +  ++ ++V
Sbjct: 187 AR-GLKPGDASWPEAAYNGDYIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAV 245

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +      DL+A  ++ D +  E   +      +   + +L  +G  YE          
Sbjct: 246 TYLRNEQDIDLQAFGVKFDRYYLESSLY--SDGRVDAAVQSLIDKGKTYES--------- 294

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +I V GS
Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGS 347

Query: 359 DHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           DH G + R+ A    +     +   + +L ++V + ++G  +K+SKRAG ++T+R +++ 
Sbjct: 348 DHHGTIARVRAGLQGLDIGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                    G D+VRF +L RK      FD     +Q+ ENPV+
Sbjct: 408 SNGGDETIRGCLEQGVADWPAHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI--VHLAEYPRVIE 510
           YVQYA+AR  SIF        +          +   +  D S   L     LAE+P ++ 
Sbjct: 468 YVQYAHARICSIFESWGGADWESRLAELAGADLSAVTGADASAQALALGRRLAEFPDMLA 527

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P+ +AFYL DLA  FH  ++  R       V  ++  +   RL L+ A   ++
Sbjct: 528 AAAAELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVL 580

Query: 571 NSGLNIIGVESPNEM 585
            +GL +IGV +P  M
Sbjct: 581 RNGLAVIGVSAPRRM 595


>gi|300741294|ref|ZP_07071315.1| arginine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380479|gb|EFJ77041.1| arginine--tRNA ligase [Rothia dentocariosa M567]
          Length = 561

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 176/586 (30%), Positives = 296/586 (50%), Gaps = 42/586 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S+ +   L +     ++   +   L    +ERP+   HG  +TN A+ L++ +G +P 
Sbjct: 12  ELSAAIAQELDKTIASGQLTLADNAELPLARVERPKSREHGDWATNIALQLAKKVGKNPR 71

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A ++  +I   P V +V IAG GF+N+ L  +    + ++IV +G  YG +    G  
Sbjct: 72  EVAAVLADKIASIPGVSTVDIAGPGFLNITLDAAAAGTLAATIVEAGKTYGTSDKFAGKT 131

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+EFVSANPTGP+H+G  R A VGD LA+++   G  V REYY ND G QI+    S+ 
Sbjct: 132 INLEFVSANPTGPIHLGGTRWAAVGDALANILEAEGANVVREYYFNDHGTQIDRFVNSLL 191

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          PE  Y G Y+  +  ++  +    L     E    + ++   + M 
Sbjct: 192 AAAK------GEPTPEDGYAGAYITDIKDQILAQRPDAL---DAENSAEVFREIGTELMF 242

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I++ L       D+F  E+     +      II+ + + G ++E              
Sbjct: 243 AQIKESLHRFGTDFDVFFHENSVF--ESGEADRIIEQMKQDGQLFES------------- 287

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSD 359
                    R+T  GDD DR ++KSDG++ Y A D+AYF+ K  R     D  IY++G+D
Sbjct: 288 ---EGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYFRNKMTRPENPADIAIYMLGAD 344

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           HSGYV RL+A+A  +  +  QI V++ +LV L +DG  ++MSKRAG+ +TL  +V+ VG 
Sbjct: 345 HSGYVGRLKAIAQILGYRTEQIEVMIGQLVNLVKDGKHVRMSKRAGNVVTLEDLVEAVGV 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++       +D D   + ++S +NPV+YVQYA+AR  ++ R A      +D  +
Sbjct: 405 DAARYELIRYSVDSTIDIDLDLLVQKSSDNPVYYVQYAHARTAAVERNA------IDAGV 458

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +        ++ +L+  L +YP  +  A    EP++++ YL +LA+ +H  +   
Sbjct: 459 HLADGVDTGLLNTPADTELLAVLGQYPATVRTAAEFYEPHRVSRYLENLAAAYHSWYGLS 518

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P+          L   RL L +A   ++ +GL ++GV +P  M
Sbjct: 519 RVAPKG---DEPVTDLHRTRLLLNNATRQVLANGLGLLGVTAPERM 561


>gi|71066501|ref|YP_265228.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|109895022|sp|Q4FQB4|SYR_PSYA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71039486|gb|AAZ19794.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 609

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 185/625 (29%), Positives = 309/625 (49%), Gaps = 70/625 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S   + +  +    ++     +   I R +D +HG  ++N A+  ++    +P  +AE
Sbjct: 9   LASLFDSAIAVLKNDGELPADWQNNSQITRTKDASHGDFASNIALTAAKAAKANPRQVAE 68

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +  + D+  + IAG GFIN++L+      +L  I      +G +    G KV +E
Sbjct: 69  KIVNALPENQDIRQIEIAGPGFINVFLNTEAKFAVLDDIFNLQAGFGLSKQFDGQKVQVE 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPT  +HVGH R A  G ++++L+   GY+VTREYY+NDAG Q++ LA S + RY 
Sbjct: 129 FVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGYDVTREYYVNDAGRQMDILATSTYLRYL 188

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEKWLPIVKD--- 235
           +         P   Y G Y+  + + L  +++   +        + PE+    I  D   
Sbjct: 189 E-TNGEPVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFAEIAKDVPEDAQFEINADGEK 247

Query: 236 -------------------------------YSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                                           ++ +++  I+DDL    + ++ + SE  
Sbjct: 248 VLLSGDKEAHIDGLIANSKALLGSGYELFLNAALSSILADIKDDLNDFGVSYECWFSERS 307

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                 S I  ++  L  +GY+YE                    + F+ST  GD+ DR +
Sbjct: 308 I----DSEIEPVLQILEDKGYLYE----------------KDGNIWFKSTDFGDEKDRVV 347

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +++G  TYFA+D+AY K K++RGFD ++ V G+DH GYV R++A   A+     +++V+
Sbjct: 348 RRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDADRLDVV 407

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L+R    ++MS R+G F+TLR +  EVG+D+ RF  + RK    +DFD    K 
Sbjct: 408 LVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKS 467

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QSK+N V+Y+QYA+AR   +  + +     ++  +       QE    +SE +LI  LA 
Sbjct: 468 QSKDNLVYYIQYAHARVCRVLEKLEASGLSVNDAMGAE---QQELLVASSEEELIKLLAA 524

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR----LRFVQANNRKLTMMRL 560
           YP  +  +    EP+ L  YL +LA++FHG +   R  P          A+   +   RL
Sbjct: 525 YPATLLRSATGYEPHILTNYLKELAALFHGWYDSNRILPVSLTSGETPSADEMAMMQARL 584

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           +L  AV  +I++GL ++G+ +P+ M
Sbjct: 585 RLSKAVRLVISNGLGLLGLSAPSSM 609


>gi|171464254|ref|YP_001798367.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692828|sp|B1XSF4|SYR_POLNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171193792|gb|ACB44753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 575

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 197/610 (32%), Positives = 295/610 (48%), Gaps = 72/610 (11%)

Query: 8   SSRLKNYLKEIDCKIKVEKKI--LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            +RL   L      +  E+ +       +ERP+   HG ++ N A+ LS+   L+P  +A
Sbjct: 6   KNRLIEMLSAALTGLAQERGLEAPPTPRLERPKAVDHGDVACNIALQLSKAWKLNPRELA 65

Query: 66  ELIVARIKI----DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG- 120
           + +V R++     +  + S  IAG GF N  LS +    ++  I+  G  +G +    G 
Sbjct: 66  QALVERLQQQTGFNELIASCEIAGPGFSNFRLSNAAKTAVVQEILSGGTSFGESAPADGS 125

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
            T   IEFVSANPTGP+HVGH R A +GD LA+L+A  G +V RE+Y NDAG QI  LAL
Sbjct: 126 ATSAMIEFVSANPTGPLHVGHGRQAALGDALANLLATQGIKVHREFYYNDAGVQIANLAL 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  R  Q L   D+  PE  Y G Y+  +      K S E  +      +  ++ ++V 
Sbjct: 186 SVQAR-LQGLKPGDAKWPEQAYNGEYIAEIATTF--KASPEFKD-----DIEAIRQFAVA 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +      DLK   ++ D +  E   +      +  I+ +L   G  YE           
Sbjct: 238 YLRNEQDIDLKTFGVKFDCYYLESSLYT--DGSVAQIVGDLQSIGKTYES---------- 285

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L  ++   GDD DR + KSDGS+TYF  D+AY   K+ RGF  +I V GSD
Sbjct: 286 ------EGVLWLKTIDDGDDKDRVMRKSDGSFTYFVPDVAYHTSKWNRGFQKVINVQGSD 339

Query: 360 HSGYVKRLE----AVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           H G + R+      VA        K   + +L ++V + R G  +K+SKRAG ++T+R +
Sbjct: 340 HHGTIARVRSGLQGVAQKRGWDIPKTYPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDL 399

Query: 414 VDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
           V+                    G D+VRF ++ RK      FD     +Q+ ENPVFYVQ
Sbjct: 400 VEWSGGVTPEMTSEERELALQRGRDAVRFFLISRKADTEFVFDIDLALQQNDENPVFYVQ 459

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR  SI +Q          DL   ++   +S+       L+  LAEYP ++  A   
Sbjct: 460 YAHARISSILQQWGGQTS----DLASADLSLLQSKASDH---LLRCLAEYPEMLTTAAEE 512

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ LAFYL +LA  FH  ++  R       V  +++ L + RL L+ A   ++ +GL 
Sbjct: 513 LAPHALAFYLRNLAGDFHTFYNADR-------VLVDDQNLKLARLALLSATRQVLQNGLK 565

Query: 576 IIGVESPNEM 585
           ++GV +P +M
Sbjct: 566 VLGVSAPAKM 575


>gi|315925515|ref|ZP_07921725.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621056|gb|EFV01027.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 563

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 189/586 (32%), Positives = 288/586 (49%), Gaps = 40/586 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++  +           + L  I +E PR+   G  +TN AM L     + P  IAE
Sbjct: 11  LKAAVEKAVNAAVADGAFSIEHLPAIQLEVPREAQFGDYATNVAMQLPGQAHMAPRAIAE 70

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            IV            V IAG GFIN  L P++  +++  I   G +YGR     G   N+
Sbjct: 71  AIVGHFDAAAAYVQDVTIAGPGFINFALDPTWHYEVIGEIEAKGADYGRTTGNAGKTYNL 130

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGPMH+G+ R   +GD LA + A++GY+VTRE+Y+NDAG QI     S+  R+
Sbjct: 131 EFVSANPTGPMHMGNARGGAIGDVLAEIAAWTGYDVTREFYVNDAGNQIAKFGDSLDARF 190

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQA 240
           +Q L   D   PE  Y G  ++   +E   +         LL+   E    +  DY+++ 
Sbjct: 191 RQLL-GEDIPFPEDGYQGADIRAHMEEYIAENGGKAAVRPLLDRTPETRKALFVDYALKK 249

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ +  D+++  + +D++ SE   +  D   I   +  L  +G  Y+            
Sbjct: 250 NLRQMHADMESYGVDYDVWFSEQSMY--DDGEIERALKLLKDKGATYD------------ 295

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
                     F++T  G + D  L++ +G  TYF  D+AY   K   RGFD  + V G+D
Sbjct: 296 ----KEGATWFKTTDYGCEKDDVLIRQNGLPTYFMGDIAYHLNKLLTRGFDRAVNVWGAD 351

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H G++ RL+A  AA     +++ ++  +LVRL RDG P++MSKR G  I L  ++D VG 
Sbjct: 352 HHGHIARLKAAIAAAGVDASRLEIVTMQLVRLIRDGEPVRMSKRQGKAIGLTELLDMVGI 411

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R     R      DFD      QS +NPVFYVQYA+AR  SI RQ        D DL
Sbjct: 412 DAARVFFNLRSPDSHFDFDLDLAIRQSNDNPVFYVQYAHARIASILRQLGG-----DVDL 466

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                +  E   +  EL+L+  L+++P  I  A    +P ++  Y   LAS FH  ++  
Sbjct: 467 AAPAKL--ELLTNPKELELLSVLSDFPETIVAAEHKMDPSRMVHYAQRLASAFHTFYNEC 524

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       V+ ++  L   RL+L+ A   ++ + L I+GV++P  M
Sbjct: 525 R-------VRVDDADLMHARLKLILACRQVLENVLGILGVDAPEAM 563


>gi|206559077|ref|YP_002229837.1| arginyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693086|sp|B4E9M9|SYR_BURCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|198035114|emb|CAR50988.1| putative arginyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 593

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 197/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL LS +  + +++++   G  +G +   
Sbjct: 67  QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A      +    + + L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                  L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQATSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDAAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAMLGVSAPAKM 593


>gi|268609113|ref|ZP_06142840.1| arginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 588

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 182/608 (29%), Positives = 293/608 (48%), Gaps = 58/608 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                + + L  +  +  V    +    IE P D +HG  + N AM+ ++   + P  IA
Sbjct: 11  QLREMIMDALGVLVAEQAVPAVPMPDFTIEIPADKSHGDFAANTAMVCAKAFKMPPRKIA 70

Query: 66  ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           ELI  +++++  + +   +AG GF+N +L   +  +++ +++  G  YG+   G G +  
Sbjct: 71  ELITEKVQMEGTMFEKTEVAGPGFMNFFLGRKWFSQVVENVLEEGENYGKTDTGAGKRAL 130

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGPMH+G+ R   +GD LAS++ ++G+   RE+Y+NDAG QI     S+  R
Sbjct: 131 VEFVSANPTGPMHIGNARGGAIGDCLASVLQWAGWHAEREFYVNDAGNQIEKFGKSLSLR 190

Query: 185 YQQALYN--------------------------NDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y                                 D  +PE  Y G  +    K   D + 
Sbjct: 191 YMHICSEKGQEIYKSAADTEEVCRRIYGEDGSSEDFPMPEDVYLGQDIIEHAKNYFDLHG 250

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           + L N  EE+    + DY++   +  +  DLK   I +D +  E   H  + + +  ++D
Sbjct: 251 NSLENVSEEERRKALVDYALPLNIAGLERDLKKYRIVYDNWFRESTVHEKNETKL--VVD 308

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G  YE                    + FR+T  G D D  L +S+G YTY   D+
Sbjct: 309 KLMEAGKAYE----------------QDGAVWFRATDYGMDKDFVLKRSNGLYTYIVPDI 352

Query: 339 AYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           AY   K   R FD  I V+G+DH GYV RL+A   A+    ++++V+L ++VRL R+G  
Sbjct: 353 AYHYNKLVTRNFDKAINVLGADHHGYVPRLKAALTALGVDASKLDVVLMQMVRLVRNGET 412

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           +K+SKR+G  ITL  ++DE+  D+ RF    R+ +   +FD     E+S +NPV+YVQYA
Sbjct: 413 VKLSKRSGKAITLVTLLDEIPIDAARFFFNLREANSQFEFDLDLAIEKSSQNPVYYVQYA 472

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+ R   +    +                D+ E++LI HLA  P+ ++ A    +
Sbjct: 473 HARICSMLRALAEEGTQV------PEKADLSVLTDSREIELIRHLASLPKEVDLAAKTYD 526

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P K+  Y  DLA++FH  +             A   +L   RL L  AV   + + L I+
Sbjct: 527 PAKITKYAVDLATLFHRFYDAC------SVKNAETEELKNARLLLCVAVRQTLRNVLTIL 580

Query: 578 GVESPNEM 585
            +E+P +M
Sbjct: 581 NIEAPEKM 588


>gi|134297105|ref|YP_001120840.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166232769|sp|A4JIA2|SYR_BURVG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134140262|gb|ABO56005.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 593

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 198/616 (32%), Positives = 310/616 (50%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D +      ++  I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVAQVAHALKGADAEF-----VIPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL +S +  + +++++   G  +G +   
Sbjct: 67  QLAERIVAALVAQPAAQGLVDAAEIAGPGFINLRVSAAAKQAVIAAVFEQGRAFGTSQRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKRVLVEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIANLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    + + L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGATVAAKDGEPVTGARDIENLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDMIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKARYNVDVAQLPGADLSQLTSPQAVSLMQKLAEYPDLL 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAMLGVSAPAKM 593


>gi|311113372|ref|YP_003984594.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944866|gb|ADP41160.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 561

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 176/586 (30%), Positives = 296/586 (50%), Gaps = 42/586 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S+ +   L +     ++   +   L    +ERP+   HG  +TN A+ L++ +G +P 
Sbjct: 12  ELSAAIAQELDKTIASGQLTLADNAELPLARVERPKSREHGDWATNIALQLAKKVGKNPR 71

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A ++  +I   P V +V IAG GF+N+ L  +    + ++IV +G  YG +    G  
Sbjct: 72  EVAAVLADKIASIPGVSTVDIAGPGFLNITLDAAAAGTLAATIVEAGNTYGTSDKFAGKT 131

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+EFVSANPTGP+H+G  R A VGD LA+++   G  V REYY ND G QI+    S+ 
Sbjct: 132 INLEFVSANPTGPIHLGGTRWAAVGDALANILEAEGANVVREYYFNDHGTQIDRFVNSLL 191

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +          PE  Y G Y+  +  ++  +    L     E    + ++   + M 
Sbjct: 192 AAAK------GEPTPEDGYAGAYITDIKDQILAQRPDAL---DAENPAEVFREIGTELMF 242

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I++ L       D+F  E+     +      II+ + + G ++E              
Sbjct: 243 AQIKESLHRFGTDFDVFFHENSVF--ESGEADRIIEQMKQDGQLFES------------- 287

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSD 359
                    R+T  GDD DR ++KSDG++ Y A D+AYF+ K  R     D  IY++G+D
Sbjct: 288 ---EGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYFRNKMTRPENPADIAIYMLGAD 344

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           HSGYV RL+A+A  +  +  QI V++ +LV L +DG  ++MSKRAG+ +TL  +V+ VG 
Sbjct: 345 HSGYVGRLKAIAQILGYRTEQIEVMIGQLVNLVKDGKHVRMSKRAGNVVTLEDLVEAVGV 404

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ++       +D D   + ++S +NPV+YVQYA+AR  ++ R A      +D  +
Sbjct: 405 DAARYELIRYSVDSTIDIDLDLLVQKSSDNPVYYVQYAHARTAAVERNA------IDAGV 458

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +        ++ +L+  L +YP  +  A    EP++++ YL +LA+ +H  +   
Sbjct: 459 HLADGVDTGLLNTPADTELLAVLGQYPATVRTAAEFYEPHRMSRYLENLAAAYHSWYGLS 518

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P+          L   RL L +A   ++ +GL ++GV +P  M
Sbjct: 519 RVAPKG---DEPVTDLHRTRLLLNNATRQVLANGLGLLGVTAPERM 561


>gi|118602135|ref|YP_903350.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166232836|sp|A1AVC2|SYR_RUTMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118567074|gb|ABL01879.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 567

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 198/606 (32%), Positives = 322/606 (53%), Gaps = 66/606 (10%)

Query: 7   FSSRLKNYLKE---IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
              +L+  LK+   +     V +   + I I+  +D   G  ++N AM+L++  GL P  
Sbjct: 1   MKEQLQKILKQSLNLLENEGVLESAPENIRIDHTKDKTQGDFASNIAMVLAKRSGLIPKV 60

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A+ I+  +  +  +D V IA  GFIN ++S     +I+  I+     YG+  +GKG ++
Sbjct: 61  LAQKIIDNLGDNTQIDKVQIADPGFINFFISQGESVQIIEQIINQAEHYGKADVGKGQRI 120

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A  G T+ASL+   G+EV  EYY+NDAG Q++ LA+SV+ 
Sbjct: 121 LLEFVSANPTGPLHVGHGRVAAYGATVASLLRAVGFEVDNEYYVNDAGRQMDILAISVYL 180

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL---------------------ADKYSSELL 222
           RY +         P+  Y G Y+  + K++                      +K+   L+
Sbjct: 181 RYVET-----EQFPDNGYKGDYIFDIAKKISGVKKLDIFISQRSVKKNAGNKEKHIDRLI 235

Query: 223 ---NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F        + D ++  ++  I+ DL    +++  + SE      D    ++I+  
Sbjct: 236 ANCKFQLGHDYKKILDLAINNILSGIKIDLVEFGVKYQQWFSEQSL--MDSGLSKEIVKK 293

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L   GY+YE                    L F++T  GDD+DR +++ +G YTYFA+D+A
Sbjct: 294 LQDSGYIYE----------------KEGALWFKTTDFGDDLDRVVVRKNGKYTYFASDIA 337

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y   K+ERG+D +I + G DH GY+ R++A   A++    ++ +LL + V L+R+G    
Sbjct: 338 YHLEKFERGYDKIINIWGVDHHGYIARIKASIKALNHNSNKLEILLVQFVNLFRNGKKAS 397

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MS R+G FITL  + +EVG+D+ RF  +  K+ + ++FD    K +S ENPVFY+QYA+A
Sbjct: 398 MSTRSGSFITLEELREEVGNDAARFFYILSKSGQHMNFDLDLAKSKSNENPVFYIQYAHA 457

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  S+ +QAK     +D DL   N        + SE  LI  L  Y  +++++ +  EP+
Sbjct: 458 RICSVLKQAKSPSM-VDIDLSVLN--------NESEALLIKELNRYKDILQSSALNYEPH 508

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            LA YL +LA  FH ++++ +          ++ KL   RL L+ AV  I+ +GLN++GV
Sbjct: 509 VLACYLRELAGHFHSYYNNSKF-------LVDDDKLRNARLFLIIAVKQILVNGLNLLGV 561

Query: 580 ESPNEM 585
            +P+ M
Sbjct: 562 SAPDSM 567


>gi|256390399|ref|YP_003111963.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256356625|gb|ACU70122.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 556

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 308/582 (52%), Gaps = 32/582 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
             S  + + + E      +    +   + +ERP++  HG  +TN A+ L++  G+ P  +
Sbjct: 5   QLSQAVLDTVNEAVADGALTLTAVPATVTVERPKNRDHGDYATNVALQLTKAAGMPPRAL 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AEL+  R++    +  V +AG GF+NL L+     ++  SIV  G +YGR+       VN
Sbjct: 65  AELLAERLREVEGIAGVDVAGPGFLNLKLAAGAAGELAKSIVEQGAQYGRSETFAAQIVN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+GH R A VGD L  L+  +G +VTRE+YINDAG Q+N   LS+  R
Sbjct: 125 LEFVSANPTGPLHLGHTRWAAVGDALGRLLEAAGADVTREFYINDAGNQMNNFGLSLALR 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                   +    +G Y G Y+K + + + +++   L   P+E  +   +    +  +++
Sbjct: 185 AN----GEEVPSGQGLYEGAYIKDLAQAILEEH-PVLTQLPQEAQVEAFRTAGYKTQLRL 239

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            ++ L+      D++ SE   H  +   +  + D LA QG+V+E                
Sbjct: 240 QQESLEKFRTHFDVWFSEKTLH--ESGAVEGVADRLAEQGHVFE---------------- 281

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +  R+T  GDD DR +++S+G  TYF+AD AY+  K +RG+   IY++G+DH GYV
Sbjct: 282 QDGAVWLRTTDFGDDKDRVIVRSNGERTYFSADCAYYLNKRDRGYSPCIYMLGADHHGYV 341

Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            RL+A+AA   +   Q I VL+ + V++ +DG  +K+SKR G+ +TL  V+D +G D+ R
Sbjct: 342 GRLKAMAACSGDDPEQDIEVLIGQFVKMVKDGEEVKLSKRTGNIVTLDDVIDLIGVDAAR 401

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +        L  D   +  Q  ENPV+YVQYA++R  S+ R A ++     FD     
Sbjct: 402 YALARSSVDNELVLDVDLLTSQKAENPVYYVQYAHSRMASVKRNAAELG----FDKGTAE 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E      E  L+  LAE+PRVI  A   ++ +++A YL D+A  +HG ++  R  P
Sbjct: 458 DFKPELLSHPREEALLAALAEFPRVIAQAAGLRKVHQVAHYLEDMAKKYHGFYTDCRILP 517

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +     L   R+ L  A  +++ +GL+++GV +P  M
Sbjct: 518 ---LGEDKPSDLNRARMWLAEATQTVLRNGLDLLGVSAPERM 556


>gi|269219842|ref|ZP_06163696.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210747|gb|EEZ77087.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 558

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 192/588 (32%), Positives = 297/588 (50%), Gaps = 42/588 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           + S  + + L        +  +  L  + +ERPR   HG  +TN AM L+R  G +P  +
Sbjct: 5   ELSRLVADELASAVADGTLTIEGELPVVKVERPRSREHGDWATNVAMQLARRAGRNPREL 64

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            EL+ ARI     V+   +AG GF+N+ LS + + ++  ++V +G  YGR     G  VN
Sbjct: 65  GELLAARIAAHDGVEEAEVAGPGFVNIRLSAASVGELARAVVEAGGSYGRTEGDAGKTVN 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+VSANPTGP+H+G  R A VGD+LA ++ FSG +V +EYY ND G QI+  A S+  R
Sbjct: 125 LEYVSANPTGPLHIGGARWAAVGDSLARILEFSGAKVVKEYYFNDHGNQIDRFAASLLAR 184

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSVQA 240
            +        D+PE  Y G Y+  + + +          +     +E+     +   V+ 
Sbjct: 185 AR------GEDVPEDGYGGQYVTEIAERVVADSIADGEPDPRELSDEQAHEAFRSRGVEL 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M   I+  L       D+F  ED  H  +   +   I+ L  +G VYE            
Sbjct: 239 MFAEIKSSLHDFRSDFDVFFHEDSLH--ESGAVSKAIERLRERGVVYE------------ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L   +T  GDD DR ++KSDG   YFA DLAY+  K  RG DN +Y++G+DH
Sbjct: 285 ----KEGALWLCTTDFGDDKDRVIVKSDGEAAYFAGDLAYYLDKRARGADNCVYMLGADH 340

Query: 361 SGYVKRLEAVAAAVSEKKA---QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            GY+ R+ A+A A  +       + +L+ +LV L R G+P++MSKRAG  +TL  +VD V
Sbjct: 341 HGYIGRMYAMARAYGDTAGPGENMEILIGQLVNLVRSGVPVRMSKRAGTVVTLEDLVDAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       LD D   V  ++ +NPV+YVQYA+AR  S+   A       + 
Sbjct: 401 GVDAARYSLVRASVDTTLDLDLDLVASRTNDNPVYYVQYAHARTCSVASNAASHGVRRED 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +   +SE       L+  LA +P V   + I +EP+++A YL ++A+ +H  + 
Sbjct: 461 GFAPGLLDAVDSE-------LLGTLARFPDVAAQSAILREPHRVARYLEEVAAAYHTWYG 513

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  PR    +     L   RL +  A   ++ +GL ++GV +P  M
Sbjct: 514 KARVTPR---AEEEVADLHRTRLWVNDAAGVVLANGLGLLGVSAPERM 558


>gi|88855307|ref|ZP_01129971.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815214|gb|EAR25072.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 553

 Score =  511 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 189/591 (31%), Positives = 307/591 (51%), Gaps = 44/591 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKIL--DRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M   AD S+ L + +  I          L  + +V+ERPR+  HG  ++N AM L++ LG
Sbjct: 1   MNP-ADLSATLLSVVTRIAADRGTPDLGLTVNDLVLERPRNRDHGDWASNVAMKLAKTLG 59

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
             P  +A  I  +++    + +V +AG GFIN+ L  +    +  +IV  G  YG N   
Sbjct: 60  ASPRELATEIAEQVRTIDGIAAVDVAGPGFINITLDAAAAGALAKTIVEQGDAYGSNDSL 119

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G  +N+EFVSANPTGP+H+GH R A +GD+LA ++  +G E+  E+YINDAG Q++   
Sbjct: 120 AGQTINLEFVSANPTGPLHIGHTRWAALGDSLARILKTAGAELVSEFYINDAGNQMDNFG 179

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S+    Q          PE  YPG Y+  + KE+   +  ELL+   +  + + ++   
Sbjct: 180 ASILASAQ------GEPTPENGYPGAYIAELAKEVLVSH-PELLDLEHDAAIAVARERGY 232

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +  I+  L   N+  D++ SE   H  +    S I + ++ L  QG+V         
Sbjct: 233 ELQLGAIKKSLADFNVHFDVWFSERSLHVANGEGASAIDEAVERLRAQGHV--------- 283

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                  D D   +   +T  GDD DR + + +G YTYFA+D AY+  K +RGF + IY+
Sbjct: 284 ------VDRDD-AVWVTTTDFGDDKDRVIKRGNGVYTYFASDAAYYLSKGDRGFAHKIYL 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +G+DH GYV RL+A+A A  +   + I V++ +LV +       ++SKRAG+ I L  + 
Sbjct: 337 LGADHHGYVHRLKALAGAAGDDPNKDIEVMIGQLVSI----NGARLSKRAGNIIELDDLR 392

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + +G+D++R+ +        L  D   +K+++ +NPVFYVQYA+AR  S+ R A +   D
Sbjct: 393 EWLGTDALRYSLGRYPADSPLTLDPEILKKRTNDNPVFYVQYAHARTHSVARNAGESGVD 452

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                  R+V       + +E  L+  LAE+PR++  A   +EP+++A Y  +LA  +H 
Sbjct: 453 -------RSVFDASLLTNETESILLGVLAEFPRIVAQAAELREPHRVARYAEELAGSYHR 505

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R  P           +   RL +  AV  ++ +GL ++GV +P  M
Sbjct: 506 WYDQCRVTPMN---DEEATDVHRTRLWVNDAVGQVLRNGLWMLGVSAPERM 553


>gi|121607568|ref|YP_995375.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121552208|gb|ABM56357.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 569

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 186/573 (32%), Positives = 291/573 (50%), Gaps = 47/573 (8%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGK 86
           +  +E P+  AHG  +  AA+ L++ L ++P  +AE + + +   P     V  + IAG 
Sbjct: 26  KAALESPKVAAHGDFACTAALQLAKTLHMNPRQMAEKLRSALLATPAFQRWVSDIDIAGP 85

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ L P+  + ++S ++ +G  +G      G +V +EFVSANPTGP+HVGH R A +
Sbjct: 86  GFINIRLKPAARQAVVSEVLAAGAHFGCQPP-NGQRVLVEFVSANPTGPLHVGHGRQAAL 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLPE--G 199
           GD +  L A  G++V RE+Y NDAGAQI TLA S   R +      A +  D D P   G
Sbjct: 145 GDAICKLFATQGWQVHREFYYNDAGAQIQTLAHSTRLRAKGFKPGDACWPTDPDDPASRG 204

Query: 200 YYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           +Y G Y++ +  +   +              +   L  ++ ++V  +      DL+A N+
Sbjct: 205 FYNGDYIQDIANDFLAQKTVQADDRSFTASGDVDDLESIRQFAVAYLRNEQDKDLRAFNL 264

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           Q D +  E   +      +   ++ L   G  YE                    L  RST
Sbjct: 265 QFDEYYLESSLYT--SGRVEAAVNRLIANGKTYE----------------RDGALWLRST 306

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373
             GDD DR + K DGSYTYF  D+AY   K+ERG+  ++ V G+DH G + R+ A   A 
Sbjct: 307 DYGDDKDRVMRKQDGSYTYFVPDVAYHIAKWERGYAKVVNVQGTDHHGTIARVRAGLQAA 366

Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            V       + +L  +VR+ + G  +K+SKRAG ++TLR +++    D+VRF +L RK  
Sbjct: 367 DVGIPPGYPDYVLHTMVRVVKGGQEVKISKRAGSYVTLRELIEWTSRDAVRFFLLSRKPD 426

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD      Q+ +NPV+YVQYA+AR  S+ R   D       D+            D
Sbjct: 427 TEYSFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWADQGGG---DMAVLRAADLSLLDD 483

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                L++ L +YP ++  AT +Q P+ ++FYL DLA+ +HG++   R       +   +
Sbjct: 484 PQAQALMLQLGKYPAMLTAATASQAPHDVSFYLRDLAASYHGYYDAQR-------ILVAD 536

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++   RL LV A A ++++GL ++GV +P  M
Sbjct: 537 ERVKHARLALVSATAQVLHNGLAVLGVSAPARM 569


>gi|115353019|ref|YP_774858.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322101|sp|Q0BBE9|SYR_BURCM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115283007|gb|ABI88524.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 593

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 67/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD  +++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++   G  +G +   
Sbjct: 67  QLAEKIVAALTAQPAAQGLVDAADIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y NDAG QI  LA
Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    +   L  
Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   +      +   +D L + G  YE    
Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K+ERGF  +
Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+     ++    + D+                + L+  LAEYP ++
Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQAVSLMQKLAEYPDML 524

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 578 LENGLAVLGVSAPAKM 593


>gi|116671171|ref|YP_832104.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611280|gb|ABK04004.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 554

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 195/584 (33%), Positives = 311/584 (53%), Gaps = 38/584 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S  +   LK+     ++      + D + +ERP++  HG  +TN A+ LS+  G++P 
Sbjct: 5   ELSLAMSACLKDAVAAGEITLSASAVPDEVRVERPKNRDHGDWATNIALQLSKQAGVNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A ++  R+     V +V IAG GF+N+ +  +    +  +IV +G EYG N    G  
Sbjct: 65  EFATVLSTRLATIDGVSAVDIAGPGFLNITVDAAAAGALAKAIVEAGPEYGTNSALAGHV 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           VN+EFVSANPTGP+H+GH R A +GD++A ++  SG +VT EYYINDAG+Q+N  A SV 
Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDSIARVLRASGAKVTAEYYINDAGSQMNVFARSVL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R           +PEG YPG Y+  +G  +  ++   +    +   LP+++  + +A M
Sbjct: 185 SRLH------GRGVPEGGYPGEYISELGHHVLTEHPD-IRELTDVAALPVIRGAAYKAQM 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K I+D L    +  D++ SE + H  D   I   +  L  QG+V++              
Sbjct: 238 KDIKDTLADFGVAFDVYFSEQELH--DAGAIESAVARLREQGHVFD-------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D   +  R+T  GDD DR +++++G  TYFAAD AY+  K +RGFD  IY++G+DH G
Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGFDQKIYLLGADHHG 339

Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           Y+ RL+A+AAA  +   A I VL+ +LV +       K+SKRAG+ I L+ ++  +G D+
Sbjct: 340 YINRLKAIAAAAGDDPEANIEVLIGQLVSV----NGAKLSKRAGNIIELKDLISWLGKDA 395

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           VR+ +        L  D   +K+ S ENPVFYVQYA+AR R   R A     +   D   
Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGTARNAVAAGVERRVD--G 453

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           ++          +E +L+ +L  YP ++  A   +EP+++A +L  +A  +H  +   R 
Sbjct: 454 KDAFDASLLDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRV 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P+          +   RL L  A + ++ +GL ++GV +P  M
Sbjct: 514 APQG---DEPITDVNRTRLWLNDATSQVLANGLELLGVSAPERM 554


>gi|167585288|ref|ZP_02377676.1| arginyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 598

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 196/616 (31%), Positives = 308/616 (50%), Gaps = 62/616 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L AD   ++ + LK  D        +   I +ERP+  AHG ++ N AM L++PLG +P 
Sbjct: 12  LLADSVKQVAHALKGADAANADVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 71

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +AE IVA +   P     V++  IAG GFINL L+ +  + ++++++  G  +G +   
Sbjct: 72  QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLTAAAKQAVIAAVLAEGRGFGLSTRE 131

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G +V +EFVSANPTGP+HVGH R A +GD LA+++A  G  V RE+Y NDAG QI  LA
Sbjct: 132 HGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGCAVHREFYYNDAGVQIGNLA 191

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232
           +S   R +  L   D+  PE  Y G Y+  + ++       A K    +    + + L  
Sbjct: 192 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLEA 250

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A  ++ D +  E   ++     +   +D L + G  YE    
Sbjct: 251 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEQTVDALIKAGVTYE---- 304

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + K+DG+YTYF  D+AY   K+ERGF  +
Sbjct: 305 ------------QDGALWLRTTDNGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKV 352

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           I + GSDH G + R+ A    +     K   + +L ++V + RDG  +K+SKRAG ++T+
Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412

Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R +++                       G D+VRF ++ RK      FD     +Q+ EN
Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  S+  + K  +   + +L             T    L+  LAEYP ++
Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY---NGELAQLPGADLSQLTSTQAASLMQKLAEYPDML 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +A     P+ +AFYL DLA  FH  ++  R       V  ++      R  L+ A   +
Sbjct: 530 SHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRTARAALLAATRQV 582

Query: 570 INSGLNIIGVESPNEM 585
           + +GL ++GV +P +M
Sbjct: 583 LENGLAMLGVSAPAKM 598


>gi|317057061|ref|YP_004105528.1| arginyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449330|gb|ADU22894.1| arginyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 586

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 190/607 (31%), Positives = 301/607 (49%), Gaps = 54/607 (8%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           FA     +   L ++  +     + +    IE P D  +G +STNAAM+ ++P    P  
Sbjct: 9   FAQARELVLKALGQLVAEEVFPAEAVPAFNIEIPADPKNGDVSTNAAMVCAKPFRSAPRK 68

Query: 64  IAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE IV +I       D V IAG GFIN Y    +   ++ +++  G EYG+   GKG +
Sbjct: 69  IAEAIVGKIDTTGSCFDKVEIAGPGFINFYYGKGWFGSVVKAVLDEGKEYGKTDFGKGKR 128

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +EFVSANPTGPMH+G+ R   +GD LA++M ++GY+V RE+YINDAG QI     S+ 
Sbjct: 129 ALVEFVSANPTGPMHIGNARGGAIGDCLAAVMEYAGYDVEREFYINDAGNQIEKFGKSLR 188

Query: 183 WRYQQALYNNDSDL-----------------------PEGYYPGVYLKHVGKELADKYSS 219
            RY Q   +   ++                       P+  Y G+ +    K   D+Y  
Sbjct: 189 LRYMQICGDKGQEIVAKNLDMDTFCKTIYEDTETFPMPDDVYLGMDIIAHAKNFFDEYGM 248

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                PEE+    + DY++   +  +  DL    I +D +  E   H  +   ++++ID 
Sbjct: 249 IASAQPEEECKKALVDYALPKNIDGLHKDLAKYRINYDTWFRESTLH--NDGSVQEVIDK 306

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L   GY YE                    L FR+T  GD+ DR L++ +G  TYF  D+A
Sbjct: 307 LKAGGYTYE----------------KDGALWFRTTDFGDEKDRVLVRDNGIPTYFVPDIA 350

Query: 340 YFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           Y   K   R FD  I + G+DH GY+ RL+A   A+   + ++++++ ++VRL +DG   
Sbjct: 351 YHYNKLAVRKFDKAIDIFGADHHGYIPRLKAAMTALGVDEKKLDIVIMQMVRLVKDGETY 410

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           K+SKR+G  ITL  +++E+  D+ RF    R+ +   DFD       S +NPV+YVQYA+
Sbjct: 411 KLSKRSGKAITLNTLLEEIPIDAARFFFNLREPNSQFDFDLDLAISNSSQNPVYYVQYAH 470

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+ ++ K+     + +  P      E+     EL+L+  +A  P  I  A  A +P
Sbjct: 471 ARICSVIKKLKEE----NIEAKPFTADMAEALSTPEELELVKLMATLPTTITEAAKAYDP 526

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
            K+  Y  D+A+++H  ++  R       ++     +   RL L  AV  II + L+++ 
Sbjct: 527 AKVTKYAVDIATLYHKFYNACR-------IKGEEENVMQARLALSLAVKQIIANILDMLK 579

Query: 579 VESPNEM 585
           ++ P  M
Sbjct: 580 IDCPESM 586


>gi|160896118|ref|YP_001561700.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687178|sp|A9BRF4|SYR_DELAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|160361702|gb|ABX33315.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 565

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 182/595 (30%), Positives = 295/595 (49%), Gaps = 60/595 (10%)

Query: 16  KEIDCKIKVEKKILD-----RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +E+   +  E + L      R   E P+  AHG  +  AAM L++PL L+P ++ E + A
Sbjct: 6   QELLAALAGELETLSPGAGARAAFESPKVAAHGDFACTAAMQLAKPLKLNPRSLGEQLKA 65

Query: 71  RIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  P     VD++ IAG GF+N+ L P+  ++I+  ++    ++G  L  +G K+ +E
Sbjct: 66  ALEATPSFQRWVDAIEIAGPGFLNIRLKPAAKQQIIREVLEQAEKFG-WLADRGAKMLVE 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+HVGH R A +GD + +L A  G+ V RE+Y NDAG QI+TL  S   R  
Sbjct: 125 FVSANPTGPLHVGHGRQAALGDAICNLYATQGWGVHREFYYNDAGVQIDTLTKSTQLR-A 183

Query: 187 QALYNNDSDLPEG--------YYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIV 233
           +     D   P          +Y G Y++ +  +            E     + +    +
Sbjct: 184 KGFKPGDECWPIDPENPASKAFYNGSYIQDIADDFLACKTVKADDREFTANGDVEDYDNI 243

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  +      DL+A N+  D +  E   +      + D +  L   G+ YE     
Sbjct: 244 RQFAVAYLRNEQDKDLQAFNLHFDEYYLESSLYTN--GYVEDAVQRLIAGGHTYEL---- 297

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  +ST  GDD DR + K DG+YTYF  D+AY   K++RG+  ++
Sbjct: 298 ------------DGALWLKSTDYGDDKDRVMRKQDGNYTYFVPDVAYHIQKFKRGYSKVV 345

Query: 354 YVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + G+DH G + R+ A   A  V       + +L  +VR+ R G  +K+SKRAG ++TLR
Sbjct: 346 NIQGTDHHGTIARVRAGLQAADVGIPAGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLR 405

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKD 470
            +++    D+VRF +L RK      FD      Q+ +NPV+YVQYA+AR  S+      D
Sbjct: 406 DLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLAAWGGD 465

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                D DL                  L++ LA+YP ++ +A     P+ + FYL +LAS
Sbjct: 466 AATLKDVDLSALEG--------PQAQALMLQLAKYPAMLTSAAEGNAPHDVTFYLRELAS 517

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H ++   R       +  ++ K+ + RL L+ A   ++++GL ++GV +P  M
Sbjct: 518 LYHSYYDAER-------ILVDDEKVKLARLALISATRQVLHNGLAVLGVSAPQRM 565


>gi|148244251|ref|YP_001218945.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166200585|sp|A5CXW2|SYR_VESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146326078|dbj|BAF61221.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 572

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 191/599 (31%), Positives = 310/599 (51%), Gaps = 70/599 (11%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           E+     + + + + I ++  +D A G  ++N AM+LS         +A+ I A      
Sbjct: 14  EVLMDNNILESMPENIRVDHSKDKAQGDFASNIAMLLSEQAQCSSKVLAQKIKANFPDSV 73

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           DV+ + I G GFIN ++S S    ++  I+  G  YG + IG G +V +EFVSANPTGP+
Sbjct: 74  DVEKIEIVGPGFINFFMSQSSNALVVEDIIKQGGNYGLSNIGMGQRVLLEFVSANPTGPL 133

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R    G  +A L+   G+EV  EYY+NDAG Q++ LA+SV+ RY +         
Sbjct: 134 HVGHGRGVAYGAAVAHLLRAVGFEVDCEYYVNDAGRQMDILAISVYLRYVET-----EQF 188

Query: 197 PEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLP-------------------- 231
           P+  Y G Y+  + K++      D +++   +  E K                       
Sbjct: 189 PDNCYKGDYIFDIAKKISGVKKLDIFTNTCKDTSEWKVQKNSIDKERYIDDLIANCKLQL 248

Query: 232 -----IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                 V D+++ +++  I+ DL    +++  + SE      D     +I+  L   GY+
Sbjct: 249 GSDYRKVFDFAINSILSDIKIDLADFGVEYHQWFSEQSLV--DSGLSEEIVKKLQDLGYI 306

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           YE                    L FR+T  GDD+DR +++ +G +TYF+ D+AY   K+E
Sbjct: 307 YE----------------KEGALWFRTTDFGDDLDRVVVRDNGIHTYFSYDIAYHLGKFE 350

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG+D +I + G+DH GY+ R++A   A++    ++ +LL + V L+RDG  + MS R+G 
Sbjct: 351 RGYDRIINIWGADHHGYIARVKASIKALNYNPDKLEILLVQFVNLFRDGKKVSMSTRSGS 410

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           FITL+ + +EVG+D VRF  + RK+++ +DF+    K +S ENPVFY+QYAY R  S+ +
Sbjct: 411 FITLKELREEVGNDVVRFFYILRKSTQHMDFNLDLAKSKSNENPVFYIQYAYVRICSVLK 470

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           Q      D+D  +    +          E  LI  L  Y  +++++ +  EP+ LA YL 
Sbjct: 471 QGMPFMADIDLLVLNNEL----------ETLLIKELNRYKDILQSSALNYEPHVLACYLR 520

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  FH ++++            ++ KL   RL L+ AV  I+ +GLN++G+ +PN M
Sbjct: 521 KLAGYFHSYYNNCEF-------LVDDDKLRNSRLLLITAVQQILANGLNLLGISTPNSM 572


>gi|326315293|ref|YP_004232965.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372129|gb|ADX44398.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 604

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 185/627 (29%), Positives = 297/627 (47%), Gaps = 78/627 (12%)

Query: 11  LKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +K  L         K+      R   E P+  AHG  +  AAM L++PL L+P  + E +
Sbjct: 4   VKQELLAALAGELDKLSPGAAGRAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQL 63

Query: 69  VARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            A ++  P     VD++ IAG GF+N+ L  +  ++I+  ++ +G  +G      G +V 
Sbjct: 64  KAALEATPAFARWVDAIEIAGPGFLNIRLKAAAKQEIVREVLAAGDRFGYQK-DNGQRVL 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A +GD + +L A  G+ V REYY NDAG QI TLA S   R
Sbjct: 123 VEFVSANPTGPLHVGHGRQAALGDAICNLFATQGWSVHREYYYNDAGVQIETLAKSTQLR 182

Query: 185 YQ-----QALYNNDSDLP--EGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPI 232
            +        +  D + P  + +Y G Y++ +  +   K              + +    
Sbjct: 183 AKGFKPGDECWPTDPENPASKAFYNGEYIQDIANDFLAKKTVQAEDRAFTANGDVEDYDN 242

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  +      DL+A N+  D +  E   +      +   +  L  +G+ YE    
Sbjct: 243 IRQFAVAYLRNEQDKDLRAFNLHFDQYYLESSLYT--SGRVEATVKRLVEKGHTYE---- 296

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  RST  GDD DR + K DG+YTYF  D+AY   K+ERGF  +
Sbjct: 297 ------------QDGALWLRSTDYGDDKDRVMRKKDGTYTYFVPDVAYHISKWERGFAKV 344

Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + + G+DH G + R+ A   A  V   +   + +L  +VR+ + G  +K+SKRAG ++TL
Sbjct: 345 VNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVKGGEEVKISKRAGSYVTL 404

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-- 468
           R +++    D+VRF +L RK      FD      Q+ +NPV+YVQYA+AR +S+ R A  
Sbjct: 405 RDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAAVA 464

Query: 469 --------------------------KDIFPDLDFDLFPRNVIPQESEFDTSE----LQL 498
                                      +   D         +    ++    E      L
Sbjct: 465 HARGDRPDVSGGQLEKLSAPDALNDVGEHVTDTSLSSACELLDLGNADLSPLEGQQAQAL 524

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           ++ LA+YP ++  A   + P+ + FYL DLA+ +H ++   R       +  ++  +   
Sbjct: 525 MLQLAKYPEMLAAAAEGEAPHDVTFYLRDLAASYHSYYDAER-------ILVDDEAVKRA 577

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL LV A A ++++GL ++GV +P  M
Sbjct: 578 RLALVAATAQVLHNGLAVLGVSAPARM 604


>gi|171060897|ref|YP_001793246.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689094|sp|B1XYP5|SYR_LEPCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170778342|gb|ACB36481.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 561

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 182/562 (32%), Positives = 288/562 (51%), Gaps = 41/562 (7%)

Query: 35  ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI----KIDPDVDSVFIAGKGFIN 90
           E P+  AHG L+  AAM L+RPL  +P  +A+ +V  +         VD++ +AG GFIN
Sbjct: 30  ENPKQAAHGDLAITAAMQLARPLRKNPRELAQALVEALGRQPAAQKWVDAMELAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L P+  ++++S+++     +G      G +V +EFVSANPTGP+HVGH R A +GD +
Sbjct: 90  LRLKPAARQQVVSAVLSQREGFGVRAP-NGQRVMVEFVSANPTGPLHVGHGRQAALGDAI 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            ++ A  G+ V RE+Y NDAG QI TLA S   R  + L   D++ P   Y G Y+  + 
Sbjct: 149 CNVFATQGWAVHREFYYNDAGVQIGTLASSTQCR-LRGLKPGDAEWPASAYNGDYIADIA 207

Query: 211 KEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           +E                  E + +  ++ ++V  +      DL+A  ++ D +  E   
Sbjct: 208 REFLAGATVKADDRAFTASGEVEDIDSIRQFAVAYLRHEQDLDLQAFGVRFDHYYLESGL 267

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + + +  L   G  +E                +   L  RST  GDD DR + 
Sbjct: 268 Y--SSGRVEEAVAKLTAAGKTFE----------------EGGALWLRSTDYGDDKDRVMK 309

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINV 383
           KSDG+YTYF  D+AY   K+ERGFD +I + GSDH G + R+ A   A  V   +   + 
Sbjct: 310 KSDGTYTYFVPDVAYHIHKWERGFDKVINIQGSDHHGTIARVRAGLQAAGVGVPQGWPDY 369

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + + G  +K+SKRAG ++TLR ++D    D+VRF ++ RK      FD     
Sbjct: 370 VLHKMVTVMKGGEEVKISKRAGSYVTLRDLIDWTSRDAVRFFLISRKADTEFVFDVDLAL 429

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           + + ENPV+YVQYA+AR  S+  +  +       DL            + +E  L+  LA
Sbjct: 430 KANDENPVYYVQYAHARVCSVLARYVEEHQG---DLATLADADLSLLAEPTEFALMNKLA 486

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           EYP ++  A     P+ +AFYL DLA+ +H ++        +RF+      +   R+ L+
Sbjct: 487 EYPEMLGAAAADLAPHNVAFYLRDLAAHYHSYYGA------VRFLDGAVEPMR-ARMALL 539

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A A ++ + L ++GV +P +M
Sbjct: 540 EATAQVLRNALAVLGVSAPRKM 561


>gi|83816551|ref|YP_445118.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|109895033|sp|Q2S3W3|SYR_SALRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83757945|gb|ABC46058.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 562

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 190/598 (31%), Positives = 305/598 (51%), Gaps = 59/598 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             ++++  L  +     V       I +E P    HG L+TN A+ L+  LG +P +IAE
Sbjct: 5   LRTQIRRVLDAL---GDVPDDF--EIELEAPDRPEHGDLATNTALRLASVLGDNPRSIAE 59

Query: 67  LIVARIKI---DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            +  R++       + SV +AG GF+N   +  YL   L+ ++  G  +G+   G G + 
Sbjct: 60  TLAERLRERVDPARIKSVEVAGPGFVNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGERA 119

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+VSANPTGP++VGH R AV+GDT+A+L+A++GY+VTREYY NDAG Q+  LA SV  
Sbjct: 120 LVEYVSANPTGPLNVGHGRNAVLGDTIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRA 179

Query: 184 RYQQALYNN----------------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           RY +AL  N                    PE  Y G Y+  + + L D++   L    + 
Sbjct: 180 RY-EALAGNVPTTTLTLDDDTTVEVPETFPEDGYLGQYIVEIAQALYDEHGDALCATDD- 237

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             L   +  +  A+   I   L+ALNI  D + +E   H  D   +  ++D LA  GY Y
Sbjct: 238 --LAPFRAAAETAIFGDIEATLRALNIDMDGYANEQALH--DEGRVDAVLDGLADAGYTY 293

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E                +   L F++T  G + D  L+K  G  TY   D+AY   K+ER
Sbjct: 294 E----------------EDGALWFKTTEFGTEDDTVLVKQTGEPTYRTPDIAYHTAKFER 337

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           GFD M+ V G+DH      + +    +     +++V+L + V L R   P+KMS R  ++
Sbjct: 338 GFDLMVDVFGADHHAAYPDVLSALDVLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANY 397

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +TL  ++++VG+D  RF  L R     L+FD    +E+S++NPVFY+QYA+AR  S+  +
Sbjct: 398 VTLDDLIEQVGADVTRFFFLMRSPDTHLNFDLELAEEESEKNPVFYLQYAHARICSVLDK 457

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A+++    D D                E+ LI  L  +PR ++NA  A+ P+ +  YL D
Sbjct: 458 AEEVGFSHDED------ADLALLTHEDEIALIKELLRFPRELQNAADARAPHFVPNYLRD 511

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +A+ F   + + R       +    ++L   R++L  A  +++ +GL ++G+ +P +M
Sbjct: 512 VATAFSQFYDNCR-------IIGEEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562


>gi|289706375|ref|ZP_06502733.1| arginine--tRNA ligase [Micrococcus luteus SK58]
 gi|289556870|gb|EFD50203.1| arginine--tRNA ligase [Micrococcus luteus SK58]
          Length = 556

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 194/588 (32%), Positives = 309/588 (52%), Gaps = 44/588 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKI-----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           D S+ L   L +      +  ++       R+ +ERPR   HG  +TN A+ L +  G+ 
Sbjct: 5   DLSALLSAVLTDAVDAGDLPAELRGEITPARVKVERPRSREHGDWATNVALQLGKKAGMA 64

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A L+  R+   P + +V +AG GF+N+ L  +    +   IV +G EYGRN    G
Sbjct: 65  PRDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDALAG 124

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             VN+EFVSANPTGP+H+GH R A +GD +A L+  SG +VT EYY+NDAG Q+N  A S
Sbjct: 125 HTVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADS 184

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  R          D+P G YPG Y++ +   +A ++   +    +E   P+V++ + + 
Sbjct: 185 VLARLH------GRDVPAGGYPGAYVQELADAVALEHPD-VRELTDEAARPVVREAAYRL 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            M+ I+D L A ++  D+F SE   H  D   I   +  L  QG++              
Sbjct: 238 QMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIEQAVQRLREQGHI-------------- 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +     +  ++T  GDD DR L++++G  TYFAAD AY+  K +RGF+  +Y++G+DH
Sbjct: 282 --EDREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLGADH 339

Query: 361 SGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            GYV RL+A+AAA  +  A  I +L+ +L+ +       K+SKRAG+ I L+ +V+ +G 
Sbjct: 340 HGYVNRLKAIAAAAGDDPATNIEILIGQLISV----NGAKLSKRAGNIIELKDLVEWLGR 395

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++R+ +        L  D   ++  + +NPV+YVQYA+AR     R A+    D     
Sbjct: 396 DALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD----- 450

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R+          +E +L+  LAE+P V+  A   +EP+++A +L  +A  +H  ++  
Sbjct: 451 --RSEFDAALLTHATESELLAQLAEFPAVVGAAARLREPHRVARHLEVIAGAYHSWYAAC 508

Query: 540 RENPRLRFVQANN--RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P             L   RL L  A A ++ +GL ++GV +P +M
Sbjct: 509 RIVPMPTDDGTPRPVETLNRTRLWLNDATAQVLANGLGLLGVSAPEKM 556


>gi|330814070|ref|YP_004358309.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487165|gb|AEA81570.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 566

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 240/586 (40%), Positives = 342/586 (58%), Gaps = 21/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F  +  +  + LK+       EK     I +E P+  + G L+ NA +IL+     +
Sbjct: 1   MNIFQFYKDQFCDLLKDNKYSCNYEK-----ISVEPPKQTSFGDLAFNAPLILAAEFKKN 55

Query: 61  PLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           PL I   I   IK    + +++ +A  GFINL L  ++    LS        + + +   
Sbjct: 56  PLEIGSEIAELIKKKFKEFENIDVAKPGFINLKLKNNFWISYLSDFNT----HNKKISSS 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+NIE+VSANPTGP+HVGHCR AV GD LA+L++F G +VT+EYYIND G QI+  + 
Sbjct: 112 KKKINIEYVSANPTGPLHVGHCRGAVYGDVLANLLSFVGEDVTKEYYINDYGNQIHMFSK 171

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SVF R Q+   N    L +G YPG YL  +   +  K     ++  E+    +      +
Sbjct: 172 SVFARIQEIKENIKFPLDQGLYPGDYLIEIANNIIKKKLITDISNYEKIKDQLGSAAMSE 231

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM+ +I+ DL AL IQHD+FISE D    D   I   I+ L ++  +YEG+L  PK    
Sbjct: 232 AML-MIKSDLLALGIQHDLFISEKDLVSKD--LISKTIEILNQKQCIYEGVLAKPKGNEI 288

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  +  R QLLF+ST  GDDVDR L KSDG++TYFA D+AY   K ER FD  I V+G+D
Sbjct: 289 EDWE-PRSQLLFKSTKFGDDVDRALKKSDGTWTYFANDVAYHAYKLERKFDKYINVLGAD 347

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GY+KRL+A   A+S+ KA      C+LV+L++ G P KMSKRAGDFIT + +V  VG 
Sbjct: 348 HAGYLKRLKACVDALSDFKADFECKTCQLVKLFKSGEPYKMSKRAGDFITAKELVKAVGV 407

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VRFMM++R N   LDFDF  V E++KENPVFYVQYA AR  S+ R+ K       FD 
Sbjct: 408 DAVRFMMIYRSNDSQLDFDFDLVTEKTKENPVFYVQYASARIHSVLRKTK-------FDN 460

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                          E++LI  L+ +P+ IE A    EP+++ +YLYDL+S  H +W+ G
Sbjct: 461 SVFEKSHLGLLTSNVEIELIKKLSLWPKTIELAARNLEPHRIPYYLYDLSSSLHSYWNLG 520

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +E+   + ++  +  L   R+ L++ + S+I SGL+I+GV +P  M
Sbjct: 521 KEDSSFKIIENPDINLVHARVFLLNKILSVIKSGLSILGVNAPETM 566


>gi|189501392|ref|YP_001960862.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|229558754|sp|B3EQ83|SYR_CHLPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189496833|gb|ACE05381.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 553

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 177/583 (30%), Positives = 290/583 (49%), Gaps = 34/583 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L  ++K+   K  +       I IE+P D   G  STN A++L+   G++P  +A+
Sbjct: 1   MREYLTEHIKQALHKASIPAS--RAIKIEKPSDSRFGDFSTNIALVLAGECGMNPRQLAQ 58

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I   +           IAG GFIN YL P+++ K +  I+ S   +GR   G+G    +
Sbjct: 59  KITENLSFSETTVSKTEIAGPGFINFYLEPAFIMKQVEQIITSSDRFGRGAAGEGKNAIV 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+ +G  R  V+GD +A+++   GY VTREYY NDAG Q++ L+ SV  RY
Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANILEAHGYTVTREYYFNDAGRQMSILSESVRLRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            + L     + PE +Y G Y++ +   + +K+  +L+   E     + K  +   +   I
Sbjct: 179 IE-LCGIAVEFPETHYQGDYIREIAAAILEKHGEKLV---ESDSTELFKQTAETHIFTHI 234

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI---RDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           ++ L  L+I HD + +E   ++ D S I   + +ID L ++G++                
Sbjct: 235 KNTLHRLDITHDSYFNEHRLYQEDESGISPNQQVIDALRQKGFI---------------- 278

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D       F +T +G + D+ L+KS G  +Y   D+AY   K+ERGFD ++ + G+DH  
Sbjct: 279 DHYDGATWFMTTRLGQEKDKVLVKSSGEPSYRLPDIAYHVTKFERGFDEIVNIFGADHID 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               +      +     +I V + + V    +G  +KMS R G+   L  ++D+VG+D+ 
Sbjct: 339 EYPDVIEALKILGYDTDRIRVAINQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADAT 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R   + R     L+FD    K+QSK+NPVFY+QYA+AR  S+ R A +       +    
Sbjct: 399 RLFFIMRSKDSHLNFDIDLAKKQSKDNPVFYLQYAHARICSLLRIA-ENEAGFSLEEGSA 457

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +           E+QL   L +YP VI+      EP K+  YL+ +A ++H  +   +E 
Sbjct: 458 DAHLMGKLTSAHEIQLGFTLLDYPDVIQTCARILEPQKMVEYLHSVAELYHRFY---QEC 514

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L+     +  +   RL L  A   ++ +G  I+G+ +P  M
Sbjct: 515 PILK----ADPDIRSARLILSLATRQVLRNGFRILGISAPKSM 553


>gi|210632829|ref|ZP_03297562.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279]
 gi|210159388|gb|EEA90359.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279]
          Length = 619

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 189/629 (30%), Positives = 308/629 (48%), Gaps = 69/629 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L        +    L+   +ERP D +HG  ++  AM  ++     P  IA+
Sbjct: 10  IEELVRAALAAAQEAGDLPAFELEDCGMERPADTSHGEWTSTMAMKSAKLAHCAPRKIAD 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +    +++ V +AG GFIN YL+ +    I       G ++ ++ +G G K  IE
Sbjct: 70  AVVAHMPESAEIEHVEVAGPGFINFYLNAAANNAIFGVAREQGRDFAKSNVGGGVKTQIE 129

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANP GPMHVGH R A +GD++ ++M  +GYEV RE++IND G Q+NT   S+  RY 
Sbjct: 130 FVSANPVGPMHVGHGRWAALGDSMCNVMQHAGYEVEREFWINDYGNQMNTFGNSISKRYM 189

Query: 187 QA---------------------------------------LYNNDSDLPEGYYPGVYLK 207
           Q                                        +    +DL +  Y G Y+ 
Sbjct: 190 QLADIMAKQGCDIDAARDFLAQDRDNYVQDEADEHLDSHPYMDEFTADLGKDSYGGTYII 249

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                       + ++   ++ +   ++   Q M+K ++D    +    D+++SE   ++
Sbjct: 250 DEAAAFWKSDGDKWVDADPQERMLSFRERGYQKMLKDMKDTCHDVRCDFDVWMSERTMYQ 309

Query: 268 GD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            D    SP+    D L + GY+Y                 +   L F+ST  GDD DR +
Sbjct: 310 KDWTGTSPVERAYDKLDKMGYLY---------------TTEDGALWFKSTAFGDDKDRVI 354

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            KS+G YTYF++D+AY   K++R  D ++ + G+DH GY+ R++AV  A+     Q  V 
Sbjct: 355 KKSNGDYTYFSSDIAYHWNKFQR-VDLVLDIWGADHHGYIPRVKAVCDALGY-PGQFEVP 412

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L + V L R G P++MSKR G  IT R ++DEVG+D+ R+ ++ R +++ +DFD   VKE
Sbjct: 413 LGQFVNLLRSGKPVRMSKRKGTMITFRELIDEVGADAARYTLVSRSSNQTIDFDIDAVKE 472

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV--------IPQESEFDTSEL 496
           +S+ NPV+YVQYA+AR  SI R+A  +  +    +   NV        +      D +EL
Sbjct: 473 KSQSNPVYYVQYAHARICSILRKAAGVTFEQAELMGMENVAVKAIGANVDYSLLTDPTEL 532

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L   ++E   +I      + P++L  Y  +LA+ FH  +   +  P     +    ++T
Sbjct: 533 ALARKISELEDLIAGCARDRAPFRLTHYAEELAAGFHSFYQACQVLPSEG--RPVEPEVT 590

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL    AV S+++  L++IGV +P +M
Sbjct: 591 RARLAACDAVRSVLDLVLSLIGVSAPTKM 619


>gi|154249102|ref|YP_001409927.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153038|gb|ABS60270.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 542

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 192/575 (33%), Positives = 304/575 (52%), Gaps = 34/575 (5%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +K  ++ I     +E       V+E P +   G  STN A++ ++     P  +A+  V 
Sbjct: 2   IKKEIESILKSFLMETGFEYDFVVEIP-EEQFGDFSTNIALVGAKYFKKAPRDVAKYFVE 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           ++   P  D + IAG GFIN  +S S+ R  L   + +  E  +       K+ +E+ SA
Sbjct: 61  KLNGHPMFDEITIAGPGFINFKVSKSFYRDFLDGFLRNPREIWK--FKNKGKIILEYGSA 118

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+ VGH R  V+GD L +++++ GY+VT+E Y+NDAG QI  LA SV+ RYQQ L 
Sbjct: 119 NPTGPLTVGHGRQIVIGDVLGNILSYIGYDVTKEMYLNDAGRQIKLLAKSVWARYQQLL- 177

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
             D  +PE  Y G Y+  + K++   Y  +     +E+   I + Y+++ + K+    L+
Sbjct: 178 GKDEPIPEDGYRGNYVIDIAKKVLKDYGEKFDGIWDEEVEEIFRKYALEDITKMFETTLE 237

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +N + D   SE      D   +++++D L  +G +YE                    + 
Sbjct: 238 KINAKFDNVYSEKSL--IDDGTVKEVLDILESKGLIYEN----------------EGAIW 279

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           FR +   +D D+ L+KSDGSYTYF  D+AY   K++RG+D  I + GSDH G++ R+EA 
Sbjct: 280 FRVSDFANDNDKVLIKSDGSYTYFLTDIAYHYKKFKRGYDLAIDIFGSDHHGHLPRMEAA 339

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A++     +  +L + V L R    +KMS RAG+F+T+  ++DEVG D+ R+      
Sbjct: 340 MKALNIPDDFLVFVLHQFVTLKRGNEVVKMSTRAGEFVTVDELIDEVGRDATRYFFAMVD 399

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            +  L+FD    K Q+ ENPV+YVQYA+AR  S+F  A      L F LF       E  
Sbjct: 400 VNTHLNFDLELAKSQTNENPVYYVQYAHARIASLFENA--TVKGLKFSLFD----NIELL 453

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            + SE+++I  ++ +  ++E       P+ L  YL  LAS FH ++S        + V  
Sbjct: 454 ENESEMRIIKLISSFDDILERVRDKLSPHYLTDYLETLASAFHKYYS------EYKIVDQ 507

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +N ++T  RL LV AV  I++ GL ++GV +P +M
Sbjct: 508 DNPEMTNARLNLVFAVKIILSEGLRLLGVSTPEKM 542


>gi|255326255|ref|ZP_05367341.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296709|gb|EET76040.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 554

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 181/586 (30%), Positives = 293/586 (50%), Gaps = 42/586 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S  +   L+E     ++   E   L  + +ERP+   HG  +TN A+ L++ +G +P 
Sbjct: 5   ELSEAIALALEETISSGQLTLVEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A L+  +I   P V SV IAG GF+N+ L  +   ++ ++IV +G  YGR+    G  
Sbjct: 65  EAAALLAEKISAIPGVASVDIAGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKT 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+EFVSANPTGP+H+G  R A VGD LA ++   G  V REYY ND G QI+    S+ 
Sbjct: 125 INLEFVSANPTGPIHLGGTRWAAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLI 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +        + PE  Y G Y+  +  ++  +    L     E+   I ++     M 
Sbjct: 185 AAAR------GEETPEDGYAGAYIVDIKDQILAQRPDALEAENPEE---IFREIGTHLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I++ L A     D+F  E+    G    +  +++ +   G ++E              
Sbjct: 236 DQIKESLAAFGTHFDVFFHENSVFEG--GKVDALLETMRENGQLFEA------------- 280

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSD 359
                    R+T  GDD DR ++KSDG++ Y A D+AY++ K  R     D  IY++G+D
Sbjct: 281 ---DGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGAD 337

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYV RL+A+A  +  +  QI V++ +LV L +DG P++MSKRAG  +TL  +V+ VG 
Sbjct: 338 HNGYVGRLKAIAQILGYRADQIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGV 397

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +        +D D   +  +S ENPV+YVQYA+A      R A       +  +
Sbjct: 398 DAARYELTRYSVDTPIDIDLGLLTSKSNENPVYYVQYAHA------RTAAVARNAAEAGV 451

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +        ++ +L+  L ++P  + +A    EP+++  YL  LAS +H  +   
Sbjct: 452 KVEDGVDTSLLDSAADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVS 511

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P+          L   RL L +A   ++ +GLN++GV +P  M
Sbjct: 512 RVAPK---ADEEVTDLHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554


>gi|239617808|ref|YP_002941130.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506639|gb|ACR80126.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 542

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 186/579 (32%), Positives = 282/579 (48%), Gaps = 38/579 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               LKN +K +   + +++  +    +E P +   G  STN A +L++ L   P  IAE
Sbjct: 2   IKELLKNDIKRVVSDLGIDE--VPDFKVEIPPE-EFGDYSTNVAFLLTKKLRKSPKMIAE 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  R      V  V +AG GFIN  L+ S  RK L  IV +   + +      T +  E
Sbjct: 59  ELSGRFSELEYVLKVTVAGPGFINFVLNDSIYRKSLFHIVDNPRFWEKE---GDTLIQFE 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F SANPTGP  +GH R  + GD L ++    GY V RE YINDAG QI  L  S++ RY 
Sbjct: 116 FGSANPTGPYTIGHGRQLIFGDVLCNVFQARGYRVHREMYINDAGRQIKLLGRSLWVRYN 175

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L+  + +LPE  Y G YL  + +EL   Y    ++  + +     K Y+V  +M+ ++
Sbjct: 176 E-LFGKEYELPEDGYRGEYLIDLAEELKISYGDRFVDRWDSEIEEFFKSYAVGKIMEGMK 234

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + L+ L +  D + SE      D   + +I+      G  Y                   
Sbjct: 235 ESLERLGMSFDNYFSEKSLV--DDGSVEEILRKFDEMGLTYR----------------KD 276

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L F  +   DD D+ L++SDG+YTYF  D+AY   KY+RG+     + G+DH G++ R
Sbjct: 277 GALWFAVSKFVDDDDKVLVRSDGTYTYFLTDIAYHYNKYKRGYRRAYDIWGADHMGHIPR 336

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   A+      +  ++ + V + R G  IKMS R G F TL  +V+ VG D+ R+  
Sbjct: 337 MRAAMKALGIADDFLYFIIHQYVNIKRGGEVIKMSTRKGQFSTLDELVESVGKDATRYFF 396

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                   + FD    K+++ ENPVFYVQYA+AR  SIFR A      LD          
Sbjct: 397 AMFDPDTHMLFDIDLAKKKNNENPVFYVQYAHARIASIFRTASQRGMKLD-------TRI 449

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E   +  E +LI  L  +P +++  T   +  +L  YL  LA  FH  ++         
Sbjct: 450 PEVLMNEEEKRLIKQLGNFPEILDQITEDYKTNRLTNYLESLAGAFHAFYNKH------V 503

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V A++ +L+M RL L  AV ++++ GL++IGV +P  M
Sbjct: 504 VVDADSPELSMFRLTLCKAVKNVLSDGLSLIGVSAPESM 542


>gi|283782705|ref|YP_003373459.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441291|gb|ADB13757.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 598

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 178/624 (28%), Positives = 309/624 (49%), Gaps = 76/624 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  ++   K++    K            +++ + RP+D AHG  +TN AM L++  G+ 
Sbjct: 6   LSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AEL   R++    +  V +AG GFIN+ L  +    ++  ++  G  +G+N    G
Sbjct: 66  PRDLAELFAERLQEAEGIARVEVAGPGFINITLDSASAAAVVDEVLKQGAAFGKNTHLSG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223
           +             + P   Y G Y+  +   +  + +++ ++                 
Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADSVIKEANADGVDVLSLPRIDLGKDEEGLP 239

Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               + +     +  +V  M   IR  ++   +  D++  E+  +  +   +   I +L 
Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVSFDVWFHENSLY--EDGEVERAIADLR 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G ++E                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 298 ERGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+ AA  +K  + + +L+ +LV + +DG P
Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKP 401

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ IT+  +VD +G D+ R+ +     +  +D D   +   S +NPV+YVQYA
Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A D    +  D    +++  E++      +++  LA++P  +  A   + 
Sbjct: 462 HARSCNVARNAADAG--ITQDGADLSLLNTETDG-----EVLAALAQWPAALAQAGDLRA 514

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561
           P+++A YL DLA+ +H  ++  R  P                  R  +         RL+
Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELTDPENRLPEAEREAQRIAKCPEPARAAARLK 574

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AV ++I +GL+++GV +P +M
Sbjct: 575 LNAAVRTVIATGLDLLGVSAPEKM 598


>gi|283458341|ref|YP_003362963.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134378|dbj|BAI65143.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 554

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 181/586 (30%), Positives = 293/586 (50%), Gaps = 42/586 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + S  +   L+E     ++   E   L  + +ERP+   HG  +TN A+ L++ +G +P 
Sbjct: 5   ELSEAIALALEETISSGQLTLVEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A L+  +I     V SV IAG GF+N+ L  +   ++ ++IV +G  YGR+    G  
Sbjct: 65  EVAALLAEKIGAIAGVASVDIAGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKT 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+EFVSANPTGP+H+G  R A VGD LA ++   G  V REYY ND G QI+    S+ 
Sbjct: 125 INLEFVSANPTGPIHLGGTRWAAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLI 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +        + PE  Y G Y+  +  ++  +    L     E+   I ++     M 
Sbjct: 185 AAAR------GEETPEDGYAGAYIVDIKDQILAQRPDALEAENPEE---IFREIGTHLMF 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I++ L A     D+F  E+    G    +  ++D +   G ++E              
Sbjct: 236 DQIKESLAAFGTHFDVFFHENSVFEG--GKVDALLDAMRENGQLFEA------------- 280

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSD 359
                    R+T  GDD DR ++KSDG++ Y A D+AY++ K  R     D  IY++G+D
Sbjct: 281 ---DGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGAD 337

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYV RL+A+A  +  +  QI V++ +LV L +DG P++MSKRAG  +TL  +V+ VG 
Sbjct: 338 HNGYVGRLKAIAQILGYRADQIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGV 397

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ +        +D D   +  +S ENPV+YVQYA+A      R A       +  +
Sbjct: 398 DAARYELTRYSVDTPIDIDLGLLTSKSNENPVYYVQYAHA------RTAAVARNAAEAGV 451

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              + +        ++ +L+  L ++P  + +A    EP+++  YL  LAS +H  +   
Sbjct: 452 KVEDGVDTSLLDSAADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVS 511

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P+          L   RL L +A   ++ +GLN++GV +P  M
Sbjct: 512 RVTPK---ADEAVTDLHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554


>gi|58697380|ref|ZP_00372706.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536220|gb|EAL59776.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 494

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 234/510 (45%), Positives = 327/510 (64%), Gaps = 17/510 (3%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
             ++E P + AHG + TN AM+L++    +P+ IAE++    ++  +V  V IAG GFIN
Sbjct: 2   NFIVEPPSNRAHGDIYTNVAMVLAKHEKKNPIEIAEVLAKEFELFDEVAKVEIAGPGFIN 61

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L       IL  I     E+G   IG    +N+EFVSANPTGP+H+GH R AV GD L
Sbjct: 62  IHLKIKVWHGILKQINELKTEFGTLDIGNNQAINVEFVSANPTGPLHIGHARGAVFGDVL 121

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+   GY+VT+EYYINDAGAQI+TL  SV+ RY++AL      + +G YPG YLK +G
Sbjct: 122 ANLLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEAL-GEKISIEKGLYPGEYLKPIG 180

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + LA KY  E L   + +   I+++Y++  ++++I++D+  L + HD+F SE +  +   
Sbjct: 181 EGLAKKYGKEFLKKQDNQ---IIREYTLSFILELIKEDMNLLGVNHDVFTSEYELQK--S 235

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I + I  L+ +G VYEG L  PK K ++     RK++LFRST  GDDVDR L K  GS
Sbjct: 236 GKIEESIKILSDKGLVYEGYLEKPKGKESENWT-SRKEMLFRSTKFGDDVDRALKKDGGS 294

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +TYFA+D+AY   K  RGF+NMI  +GSDH GYVKRL+AV +A+S+ +A+I V L  +V 
Sbjct: 295 WTYFASDIAYHFDKISRGFNNMIVELGSDHGGYVKRLKAVVSALSDDQAKIEVKLHNIVN 354

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            + +G P+KMSKR+G+F+T R VV+EVG D  RF+ML RKN  +LDFDF KVKEQSK+NP
Sbjct: 355 FFENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKVKEQSKDNP 414

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +FYVQYA+AR  S+ R A    P  D  L               EL LI  LA++P V+E
Sbjct: 415 IFYVQYAHARAHSLMRNAPKELPTADPSLLRTGG----------ELFLIKTLAKWPDVVE 464

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            A    EP+++ FYL ++A  FH  W +G+
Sbjct: 465 IAARLCEPHRITFYLLEVAEAFHVLWGYGK 494


>gi|37523848|ref|NP_927225.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932048|sp|Q7NDF6|SYR_GLOVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|35214854|dbj|BAC92220.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 601

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 181/605 (29%), Positives = 299/605 (49%), Gaps = 37/605 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEK--KILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
             +  +   L       ++ +  ++  R  +V+E+P+   HG  +T  AM L++P  L P
Sbjct: 9   QLAESIYTALGTAFEAGQLGQLTQLPPRQSVVVEKPKVPEHGDYATPVAMSLAKPCRLAP 68

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           L IAE I + +  D     V +A  GFINL L   ++   L +I+    +YGR +  +  
Sbjct: 69  LAIAEAIASYLASDEI--GVEVAKPGFINLRLGHRFVAVELQNILELKGDYGRTVPQQPE 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +EFVSANPTGP+H+GH R A +G +L  ++ F+GY V  E+YINDAG Q+  L LS+
Sbjct: 127 RILLEFVSANPTGPLHLGHGRWAALGSSLERILQFAGYTVDSEFYINDAGNQMQLLGLSL 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             RY Q L     +LP+G Y G YLK + ++L       L   P    +     Y+   +
Sbjct: 187 KQRYLQVL-GEAVELPDGGYKGSYLKELAEQLVADKGDSLGGEP----VEWFSAYAEGRL 241

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT-- 299
           ++  +  L+    + D + SE   H      I   + +L  +G +Y       +      
Sbjct: 242 LEQQKITLQQFRTEFDRWYSERSLHC--AGAIEAALADLEARGMLYRAARSRQEQSGEIT 299

Query: 300 ------------QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                       ++ D   + L F++   GD++DR + ++DG+ TY AAD+AY   KY+R
Sbjct: 300 GRSKKVQAPAAFEEEDGGGEALFFKAADFGDEMDRVVKRADGNTTYLAADIAYHWDKYQR 359

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR------DGMPIKMS 401
           G+  +I + G+DH GYV R++AVA A+      + +L+ ++VRL++          ++MS
Sbjct: 360 GYGRLINIWGADHHGYVPRMKAVAQALGHPADSLEILIGQMVRLFKTNPETGQKEEMRMS 419

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           KR G+ +++  +++EVG D+ R+ +L +  +  ++FD    + +  +NPVFYVQY +ARC
Sbjct: 420 KRRGELVSVDDLIEEVGVDAGRWFLLSQSLNTTVNFDLDLAQSEKFDNPVFYVQYNHARC 479

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R+A +    +                   E  L + L   P     A + + P +L
Sbjct: 480 CSILRKAPERGMPILERFEFLKPDGGLWLETPQERTLALRLLAAPDEYRFAAVDRTPQRL 539

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLVHAVASIINSGLNIIGVE 580
             Y YDLAS     + H    P L  +  N    L   RL LV A   ++ + L ++G+E
Sbjct: 540 TQYAYDLASDVSQFYEHC---PILPPLAENLEPALRYARLGLVVATRQVLATTLTLLGIE 596

Query: 581 SPNEM 585
               M
Sbjct: 597 PRESM 601


>gi|206602542|gb|EDZ39023.1| Arginyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 595

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 202/597 (33%), Positives = 309/597 (51%), Gaps = 29/597 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++YLKE      +   +   + +E P+    G +ST  AM LS  L   P  IAE
Sbjct: 10  ISDTLRSYLKERGQGEDLATLLPKGVRLEFPKKDGFGDISTPVAMHLSAQLKTPPRKIAE 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            + + +   P   SV IAG G++N   S + +RK L  I+ +  +       +  ++ +E
Sbjct: 70  SLYSFLSGSPLFQSVEIAGPGYLNFTFSETSVRKALLKILDTHSDLVFPE-DERRRILVE 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--VFWR 184
           FVSANPTGP+HVGH R A  GD L+ ++   G++VT EYYINDAG Q+  L  S  + WR
Sbjct: 129 FVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCLAWR 188

Query: 185 YQQALYNNDSD--LPEGY--YPGVYLKHVGKEL---------ADKYSSELLNFPEEKWLP 231
               +     +    +G   Y G Y++ + +E+          +  +S     PE  +L 
Sbjct: 189 KLHRMVPESEENAFLKGATPYKGDYIREIAQEMINTPGILSPEESRASLDPEAPETLYLG 248

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              +Y+   +M+ IR+DL+  ++  D F SE   H        D +     +  + E  L
Sbjct: 249 AFTEYAQSRIMEGIREDLQLFDVPFDAFFSEKILHEKKNGKNSDTVTLWINR--IREASL 306

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                            L  R+T++GDD DR L++SDG  TYFAAD+AY   K ER FD 
Sbjct: 307 QAT-DPGVPDVYESEGALWLRTTVLGDDKDRVLVRSDGRLTYFAADIAYHALKIERKFDV 365

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +I V G+DH GY+ R+ A    +S   +   +  V L +LV L RDG P+ MS R G+F+
Sbjct: 366 LIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMSTRGGEFV 425

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR V+DEVG D+ RF  L R +   L+FD  K KE+S +NPV+YVQYA+AR +S+ RQA
Sbjct: 426 TLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVKSLLRQA 485

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L  +   R++   E+  + +E  L+  L  +  V+ + +   E + +  YL DL
Sbjct: 486 DTRGLTLPAEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTLEVHPMTEYLTDL 542

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  +H  + H R   +    +  +R+LT+ R+ L  AV  ++  GL ++G+ +P+ M
Sbjct: 543 AGRYHHFYFHHRILSQ----EPQDRELTIARIALSIAVGRVLEKGLGLLGISAPDVM 595


>gi|327399125|ref|YP_004339994.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181754|gb|AEA33935.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 543

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 206/578 (35%), Positives = 311/578 (53%), Gaps = 38/578 (6%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +K  + +I      + K      +E P++   G  STN AMI++  L  +P  IAE  V 
Sbjct: 1   MKEKIAQIINDFVKKYKENINFTVEYPKEEKFGDYSTNMAMIMASKLKKNPKAIAEEFVE 60

Query: 71  RIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             K       + + IAG GF+N Y++ +   + +  I  +   Y +  I    KV +EFV
Sbjct: 61  FAKQQKPDLFEKIEIAGPGFVNFYINKNAFAEEIKRISENVNLYLKPKIDSTKKVQVEFV 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+HVGH R A +GD++A +++F GYEV +EYYINDAG Q++ L LS F RY+Q 
Sbjct: 121 SANPTGPLHVGHGRGAAIGDSIARILSFCGYEVEKEYYINDAGLQMHLLGLSTFIRYKQL 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   +  LPE  Y G YL  V K+L  +Y   LLN  E + + I    + + ++K I + 
Sbjct: 181 L-GIEETLPEDGYKGEYLIEVAKKLIVEYGETLLNKKESEAVEICMQKAAKDILKDIMET 239

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           LK   ++ D   +E   +  D + +   +  L  +  +YE                    
Sbjct: 240 LKDFRVEFDKVFNEKKLY--DSNEVEQSLSLLKEKNAIYE----------------KDGA 281

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
           L F+ST  GDD DR L +S+G +TYFA+D+AY + K+ +RGF  +I V GSDH GYVKR+
Sbjct: 282 LWFKSTGFGDDKDRVLKRSNGVFTYFASDVAYHRNKFLKRGFSEVIDVWGSDHHGYVKRV 341

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +A   A+     ++ V+L ++V L R+G  + MS R  +F+ L+ VV EVG D+ RFM +
Sbjct: 342 KAAIQAMGIDPNRLKVVLVQIVNLLRNGQKVSMSTRRAEFVELKDVVKEVGVDAARFMFV 401

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R     LDFD    K+QS ENPV+YVQYA+AR  SI  Q   +  ++D +  P      
Sbjct: 402 SRSVDSHLDFDLELAKKQSSENPVYYVQYAHARINSILEQ---LNSEIDLNADPS----- 453

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +  E++LI  + ++  ++E A +  EPY +   L ++A   H  ++  R       
Sbjct: 454 -CLKEKEEIELIKSVIKFKELLEKAFLETEPYFIVKGLLEVAEKLHRFYNKHR------- 505

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V  +N +L   R+ LV  V  I+  GL++IGVE+ N+M
Sbjct: 506 VIIDNEELKKARVLLVWVVKEILKIGLSLIGVEAKNKM 543


>gi|298253127|ref|ZP_06976919.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532522|gb|EFH71408.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 598

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 179/624 (28%), Positives = 310/624 (49%), Gaps = 76/624 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  ++   K++    K            +++ + RP+D AHG  +TN AM L++  G+ 
Sbjct: 6   LSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AEL   R++    + SV +AG GFIN+ L  +    ++  ++  G  +G+N    G
Sbjct: 66  PHDLAELFAERLQEAEGIASVEVAGPGFINITLDSASAAAVVDEVLKQGAAFGKNTHLSG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223
           +             + P   Y G Y+  +   +  + +++ ++                 
Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADSVIKEANADGVDVLSLPRIDLGKDEEGLP 239

Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               + +     +  +V  M   IR  ++   +  D++  E+  +  +   +   I +L 
Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVSFDVWFHENSLY--EDGEVERAIADLR 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G ++E                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 298 ERGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+ AA  +K  + + +L+ +LV + +DG P
Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKP 401

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ IT+  +VD +G D+ R+ +     +  +D D   +   S +NPV+YVQYA
Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A D    +  D    +++  E++      +++  LA++P  +  A   + 
Sbjct: 462 HARSCNVARNAADAG--ITQDGADLSLLNTETDG-----EVLAALAQWPAALAQAGDLRA 514

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561
           P+++A YL DLA+ +H  ++  R  P                  R  +         RL+
Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELTDPENRLPEAEREAQRIAKCPEPARAAARLK 574

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AV ++I +GL+++GV +P +M
Sbjct: 575 LNAAVRTVIATGLDLLGVSAPEKM 598


>gi|288819194|ref|YP_003433542.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788594|dbj|BAI70341.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752776|gb|ADO46259.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 551

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 213/584 (36%), Positives = 331/584 (56%), Gaps = 42/584 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S +K  +KEI   I +E        +E+P++ + G LSTN A ++++ L ++P  +A+
Sbjct: 5   LESSIKETIKEI-YGINIEG-----FTVEKPKEESLGDLSTNVAFLVAKELKINPKDVAQ 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  ++     +     A  GFIN   S ++ R+    ++    +Y    IGKG  V IE
Sbjct: 59  ELAKKLSNKKMLAK---ASGGFINFTFSENFWREEFEKLLKEREKYFVEDIGKGESVQIE 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+H+GH R AVVGD LA+L+   GY V REYYINDAG Q+  L LSVF RY 
Sbjct: 116 FVSANPTGPLHLGHGRGAVVGDVLANLLETYGYRVVREYYINDAGYQVYLLGLSVFCRYM 175

Query: 187 QALYNNDSDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           +     D++L + Y    Y G Y+K + +++   Y   LL    +K +  ++DY+V+ ++
Sbjct: 176 ELFGQEDAELKQVYEREGYKGSYIKKLAEDVKAFYGDALLKEERQKAIERLRDYAVKRLL 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + IRDDL+ LNI+ D++ SE   +  +   +  +I+ L  +GY YE              
Sbjct: 236 EEIRDDLELLNIKFDVWYSERSLY--EEGKVEQVINLLRERGYTYE-------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
               + L FRST  GDD DR L++SDG+YTYFA+D+AY   KY+RGF  +I V G+DH G
Sbjct: 280 --KDQALWFRSTDFGDDKDRVLIRSDGTYTYFASDVAYHWEKYKRGFARVINVWGADHHG 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+   +A+   +  ++V   ++VRL+  G  ++MSKR G+F+TLR +V+EVGSD+V
Sbjct: 338 YLPRLKGALSALGVPQNWLHVQFVQMVRLFSAGQEVRMSKRTGEFVTLRELVEEVGSDAV 397

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFP 481
           RF  L +++   LDFD   +K++S ENPVFYVQY +AR R +FR+    F  D D +   
Sbjct: 398 RFTFLTKRSDTPLDFDIDLLKKKSSENPVFYVQYMHARIRGVFREVLSRFGIDADKEELN 457

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           + V    +  +  EL+L+         I+ A +   P+ + + L DLA  FH +++H R 
Sbjct: 458 KFV---YNLREEQELKLVKKAVSLKDSIKEAALRWLPHIITYELIDLAKDFHNYYNHYR- 513

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V   +R++ + RL L   + + +   L ++ V +P  M
Sbjct: 514 ------VIVEDREVMLSRLALFKGIETSVKFALKLMKVSAPERM 551


>gi|229815551|ref|ZP_04445878.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM
           13280]
 gi|229808781|gb|EEP44556.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM
           13280]
          Length = 622

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 188/633 (29%), Positives = 304/633 (48%), Gaps = 74/633 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L        +    L+   +ERP D +HG  ++  AM  ++     P  IA+
Sbjct: 10  IEELVRTALAAAQEAGDLPAFELEDCGMERPADTSHGEWTSTCAMKSAKLAHCAPKKIAD 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IVA +    ++  V +AG GFIN YL+ +    IL      G+++ ++ IG+G K  +E
Sbjct: 70  AIVAHMPESAEIAKVEVAGPGFINFYLNAAANNAILDVARKEGMDFAKSNIGQGLKTQVE 129

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANP GPMHVGH R A +GD+L  +M+ +GY++ RE+YIND G+Q++    S+ +RY 
Sbjct: 130 FVSANPVGPMHVGHGRWAALGDSLCRVMSHAGYDIQREFYINDHGSQMDVFGNSISYRYM 189

Query: 187 QALYNNDSD---------------------------------------LPEGYYPGVYLK 207
           Q +   + +                                       L    Y G Y+ 
Sbjct: 190 QLIEIMEKEGLDIDGARDFLAQDRDNFVQDEADEHLDSHPYMDAFTEGLGGNAYGGTYII 249

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                   K   +  +  +E+ +   ++     M++ +R     +    D + SE   + 
Sbjct: 250 DEAAAFYKKDGDKWAHVTDEERMLYFREEGYAKMVENMRQLCHDVRCDFDKWFSERTVYI 309

Query: 268 GD-------PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            D        S +      L   GY+Y                     L FRST +GDD 
Sbjct: 310 KDTEGEHAGTSAVDRAFAKLDEMGYLYN----------------KDGALWFRSTDLGDDK 353

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR L+K++G YTYFA+D+AY   K++R  D++I + G DH GY+ R+  V  A+     Q
Sbjct: 354 DRVLVKANGEYTYFASDVAYHWDKFQR-VDHVIDIWGCDHHGYINRVRCVCDALGY-PGQ 411

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             VLL + V L R+G PI+MSKR G  +T + +VDEVG+D+ R+ ++ R +++ +DFD  
Sbjct: 412 FEVLLGQFVNLLRNGKPIRMSKRKGTMVTFQELVDEVGADATRYTLISRSSNQAIDFDIE 471

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ----ESEFD 492
            VKE+S+ NPV+YVQYA+AR  SI R+A     +   ++  D      I +        D
Sbjct: 472 AVKEKSQNNPVYYVQYAHARICSILRKAAGVTPEEAAEMGMDAVAAKAIGENVDYALLTD 531

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +EL L   ++E   +I +    + P++L  +  +LA+ FH  +   +  P     +  +
Sbjct: 532 PTELALSRKISELEDLIASCARDRAPFRLTHFAEELAAGFHSFYQACQVLPSEG--RPVD 589

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L+  RL    AV S++   L++IGV +P  M
Sbjct: 590 AELSRARLAACDAVRSVLELVLSLIGVSAPTTM 622


>gi|294790545|ref|ZP_06755703.1| arginine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458442|gb|EFG26795.1| arginine--tRNA ligase [Scardovia inopinata F0304]
          Length = 600

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 186/615 (30%), Positives = 303/615 (49%), Gaps = 65/615 (10%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+  S++ + L        +   ++    +IV+ RP+D  HG  +TN AM L +  G+ P
Sbjct: 17  AELISQIAHGLSAQGQAGTLTDNLIPETSKIVVMRPKDRTHGDWATNIAMQLGKKAGMAP 76

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A L   R++    + SV +AG GFIN+ L  +    ++  I+  G ++G+N    G 
Sbjct: 77  RDLAALFADRLRKAEGIASVEVAGPGFINIVLDSASAAAVVDQILSQGRKFGQNDHLTGK 136

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A +GD+LA ++  +G  V REYY ND G QIN  A S+
Sbjct: 137 TLNLEFVSANPTGPIHIGGTRWAAIGDSLARVLEANGATVVREYYFNDHGEQINRFARSL 196

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL---ADKYSSELLNFP----------EEK 228
                          P   Y G Y+  + + +   A     ++LN P          +  
Sbjct: 197 VAAAH------GEPAPADGYQGEYITEIAEAVTRQAQADGVDILNLPRVREDDGSEGDSP 250

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                ++  VQ M   I+  +    +  D++  E+  +  +   +      L  QG +Y+
Sbjct: 251 QREEFRNRGVQMMFDQIKKTMSDFRVNFDVYFHENSVY--EDGEVDRAFRRLKDQGDIYQ 308

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER- 347
                                 F+ST  GDD DR ++KS+G   Y  AD+AY+  K  R 
Sbjct: 309 ----------------KDGATWFQSTKYGDDKDRVIIKSNGETAYIMADIAYYLNKRHRV 352

Query: 348 --GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRA 404
               D  IY++G+DH GYV+RL+AV AA  +K    + VL+ +LV + +DG P++MSKRA
Sbjct: 353 KNPADIAIYMLGADHHGYVRRLQAVCAAFGDKPGYNMQVLIGQLVNVVKDGKPVRMSKRA 412

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ +T+  +VD VG D+ R+ +     ++ +D D   + + S ENPV+YVQYA+AR +++
Sbjct: 413 GNVVTMEDLVDAVGVDAARYSLERTTYNQNIDIDLDLMTKHSNENPVYYVQYAHARSKNV 472

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R A+     +          P +SE       L+  LA YP V++ A    EP+++A Y
Sbjct: 473 DRNAQAAGITVAGADLSLLDSPADSE-------LLSQLALYPSVVQTAADLNEPHRIAHY 525

Query: 525 LYDLASVFHGHWSHGRENP--------------RLRFVQANNRKLTMMRLQLVHAVASII 570
           L DLA  +H  ++  R  P              + +  +  +   +  RL+L  A   + 
Sbjct: 526 LEDLAGSYHQWYAAERVVPMKLTEPELEGSDARKTQLAKDPDPARSSARLKLNDAACQVF 585

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++GV +P++M
Sbjct: 586 ENGLALLGVTAPDKM 600


>gi|315655913|ref|ZP_07908811.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315489977|gb|EFU79604.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 559

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 176/588 (29%), Positives = 299/588 (50%), Gaps = 41/588 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + + R+   L   + +  +   +  +++++ +ERP++  HG  +TN A+ L + +G +P 
Sbjct: 5   ELTQRIIAQLSTAEAENNIVLADGVLVEKMRVERPKNRDHGDWATNIALQLGKSVGKNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE+  + I     V S  +AG GFIN+ L       +++ I+ SG +YG     KG  
Sbjct: 65  ELAEIFASAIAQIDGVSSAEVAGPGFINIRLEAGAAGALVADILASGNDYGHGEGLKGVH 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA L  FSG +VTREYY ND G+QI+  A+S+ 
Sbjct: 125 INLEYVSANPTGPLHIGGARWAAVGDSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238
              +        + PE  Y G Y+  +  ++  +       +     +E      + + V
Sbjct: 185 AAARNQ------ETPEDGYGGQYIADIAAKVQAEAKTAGDPDPATLDDEAAQEYFRSHGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I++ L+    + D+F  E+  +  +   +   +D L  +G V E          
Sbjct: 239 ELMFDEIKESLRGFRTEFDVFFHENSLY--ETGAVTKALDYLRERGEVIE---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                         +T  GDD DR ++KSDG+ +YFA+D+AY++ K  RG D  ++++G+
Sbjct: 287 ------KDGATWLLTTKHGDDKDRVVIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GYV R+ A+ AA  +K    + +++ +LV L++DG P++MSKRAGD +TL   V+ V
Sbjct: 341 DHHGYVGRMMAMCAAYGDKPGVNMQIIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       L  D   +   + ENPV+YVQYA+AR  ++ + A         
Sbjct: 401 GVDAARYALVRSSMDTQLAIDLDVLASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCAD 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +       D ++  LI  LA++P V+  A      + +  YL +L+  +H  + 
Sbjct: 461 GFAPAEL------RDPADAALIGVLAQFPSVVATAAAENATHLVPRYLENLSGAYHTWYG 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P                L L +AV  ++ +GL+++GV +P  M
Sbjct: 515 KRRVTPAG---DEPVTAEHAALLALNNAVGQVLRNGLDLLGVTAPERM 559


>gi|77163574|ref|YP_342099.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254435764|ref|ZP_05049271.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|109895010|sp|Q3JF27|SYR_NITOC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76881888|gb|ABA56569.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207088875|gb|EDZ66147.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 585

 Score =  505 bits (1300), Expect = e-140,   Method: Composition-based stats.
 Identities = 189/618 (30%), Positives = 303/618 (49%), Gaps = 80/618 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           + + + L  +  +  +     D+I ++R RD +HG  ++N +M+L++     P  +A+LI
Sbjct: 7   NLIADALSSLQQEGILSSWNKDKIQVQRTRDKSHGDFASNISMVLAKEARQKPQKLADLI 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           VAR+   P V  V IAG GFIN  L+    + ++S ++     +GR   G G  V++EFV
Sbjct: 67  VARLPEHPWVKKVDIAGPGFINFTLALPAFQAVVSQVLEQKESFGRCRTGHGKTVHLEFV 126

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+HVGH R A  GD LA L+   GY+V REYY+NDAG Q++ LA+SV+ RY + 
Sbjct: 127 SANPTGPLHVGHGRGAAYGDALARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE- 185

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSS---------------ELLNFPEEKWLP-- 231
           L       P   Y G Y++++ + L                     +      EK+L   
Sbjct: 186 LCGETLPFPSNGYQGEYVRNIARSLKAGEEDLPHHSATEILAGLPADAPTGDREKYLDAL 245

Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                          V + ++  ++  IR+DL    + +D + SE   H  +   I   I
Sbjct: 246 IQKIKNLLGKNSYQKVFEQALNTILAGIREDLAKFGVTYDAWFSER--HLTEMGAIEIAI 303

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           + L   G++Y+                      F +T  GD+ DR +++ +G  TYFA+D
Sbjct: 304 ERLKAAGHLYQ----------------KAGAWWFYATNFGDEKDRVVIRENGQPTYFASD 347

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K E+G+  +I + G+DH GY+ R++A   A+     Q+++ L +   LYR    
Sbjct: 348 IAYHLSKLEQGYHKIIDIWGADHHGYIPRIKASLQALGADLQQLDIQLVQFAILYRGKEK 407

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           I+MS R+G+F+TLR +  EVG D+ RF  + R   + +DFD    K QS ENPV+YVQYA
Sbjct: 408 IQMSTRSGEFVTLRELCQEVGKDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYA 467

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+FRQ K      + +    ++       +  E+ L+  L+ Y  V+E+A I   
Sbjct: 468 HARICSVFRQLKTREFVWNSEQGREHLG---KLNEAHEVTLLDRLSCYSEVVESAAIQSA 524

Query: 518 PY----------KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           P+          +           FH +++             +  +L   RL L+ A  
Sbjct: 525 PHLLAYYLLDLAR----------DFHTYYNAHTF-------LVDIPELRDARLALIAATR 567

Query: 568 SIINSGLNIIGVESPNEM 585
            +I +GL ++GV +P  M
Sbjct: 568 QVIKNGLTLLGVSAPESM 585


>gi|294506995|ref|YP_003571053.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8]
 gi|294343323|emb|CBH24101.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8]
          Length = 562

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 187/598 (31%), Positives = 304/598 (50%), Gaps = 59/598 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             ++++  L  +     V       I +E P    HG L+TN A+ L+  LG +P +IA+
Sbjct: 5   LRTQIRRVLDAL---GDVPDDF--EIELEAPDRPEHGDLATNTALRLASVLGDNPRSIAD 59

Query: 67  LIVARIK---IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            +  R++       + +V +AG GF+N   +  YL   L+ ++  G  +G+   G G + 
Sbjct: 60  TLAERLRGRVDPARIKNVEVAGPGFVNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGQRA 119

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+VSANPTGP++VGH R AV+GDT+A+L+A++GY+VTREYY NDAG Q+  LA SV  
Sbjct: 120 LVEYVSANPTGPLNVGHGRNAVLGDTIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRA 179

Query: 184 RYQQALYNN----------------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           RY +AL  N                    PE  Y G Y+  + + L D++   L    + 
Sbjct: 180 RY-EALAGNVPTTTLTLDDDTTVEVPETFPEDGYLGQYIVEIAQNLYDEHGDALCATDD- 237

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             L   +  +  A+   I   L ALNI  D + +E   H  D   +  ++D LA  GY Y
Sbjct: 238 --LAPFRAAAETAIFGDIEATLHALNIDMDGYANEQALH--DEGRVDAVLDGLADAGYTY 293

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E                +   L F++T  G + D  L+K  G  TY   D+AY   K+ER
Sbjct: 294 E----------------EDGALWFKTTEFGTEDDTVLVKQTGEPTYRTPDIAYHAAKFER 337

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           GFD M+ V G+DH      + +    +     +++V+L + V L R   P+KMS R  ++
Sbjct: 338 GFDLMVDVFGADHHAAYPDVLSALDVLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANY 397

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +TL  ++++VG+D  RF  L R     L+FD    +E+S++NPVFY+QYA+AR  S+  +
Sbjct: 398 VTLDDLIEQVGADVTRFFFLMRSPDTHLNFDLELAEEESEKNPVFYLQYAHARICSVLDK 457

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A+++    D D                E+ LI  L  +P+ ++NA  A+ P+ +  YL D
Sbjct: 458 AEEVGFSHDED------ADLALLTHEDEIALIKELLRFPQELQNAAGARAPHFVPNYLRD 511

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +A+ F   + + R       +    ++L   R++L  A  +++ +GL ++G+ +P +M
Sbjct: 512 VATAFSQFYDNCR-------IIGEEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562


>gi|298345508|ref|YP_003718195.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304391064|ref|ZP_07373016.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315656160|ref|ZP_07909051.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298235569|gb|ADI66701.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304325947|gb|EFL93193.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315493162|gb|EFU82762.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 559

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 177/588 (30%), Positives = 298/588 (50%), Gaps = 41/588 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + + R+   L     +  +   +  + +++ +ERP++  HG  +TN A+ L + +G +P 
Sbjct: 5   ELTQRIIAQLSTAAAENNIVLADGVLAEKMRVERPKNRDHGDWATNIALQLGKSVGKNPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE+  + I     V S  +AG GFIN+ L       +++ I+ SG +YG     KG  
Sbjct: 65  ELAEIFASAIAQIDGVSSAEVAGPGFINIRLEAGAAGALVADILASGNDYGHGEGLKGVH 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA L  FSG +VTREYY ND G+QI+  A+S+ 
Sbjct: 125 INLEYVSANPTGPLHIGGARWAAVGDSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238
              +        + PE  Y G Y+  +  ++  +  +    +     +E      + + V
Sbjct: 185 AAAR------GQETPEDGYGGQYIADIAAKVQAEAKAAGDPDPATLDDEAAQEYFRSHGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + M   I++ L+    + D+F  E+  +  +   +   +D L  +G V E          
Sbjct: 239 ELMFDEIKESLRGFRTEFDVFFHENSLY--ETGAVTKALDYLRERGEVIE---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                         +T  GDD DR ++KSDG+ +YFA+D+AY++ K  RG D  ++++G+
Sbjct: 287 ------KDGATWLLTTKHGDDKDRVVIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GYV R+ A+ AA  +K    + +++ +LV L++DG P++MSKRAGD +TL   V+ V
Sbjct: 341 DHHGYVGRMMAMCAAYGDKPGVNMQIIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       L  D   +   + ENPV+YVQYA+AR  ++ + A         
Sbjct: 401 GVDAARYALVRSSMDTQLAIDLDVLASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCAD 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P      E   D ++  LI  LA++P V+  A      + +  YL +L+  +H  + 
Sbjct: 461 GFAP------EELRDPADAALIGVLAQFPSVVATAAAENATHLVPRYLENLSGAYHTWYG 514

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P                L L +AV  ++ +GL+++GV +P  M
Sbjct: 515 KRRVTPAG---DEPVTAEHAALLALNNAVGQVLRNGLDLLGVTAPERM 559


>gi|89899583|ref|YP_522054.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|109895026|sp|Q220N0|SYR_RHOFD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89344320|gb|ABD68523.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 565

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 187/594 (31%), Positives = 296/594 (49%), Gaps = 47/594 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   L +   K+        + V E P+  AHG L+T AAM L++PL L+P  +AE
Sbjct: 4   VKIELLEALHQALEKLSPGAG--SKAVFESPKVAAHGDLATTAAMQLAKPLKLNPRQLAE 61

Query: 67  LIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            + A +      +  V+++ IAG GFIN+ L P   ++ +  ++  G ++G +  G G +
Sbjct: 62  NLRAELLVRAPFERWVEAIDIAGPGFINIKLKPEAKQQTVREVLSQGQQFG-SQPGTGKR 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EFVSANPTGP+HVGH R A +GD + +L    G+ V RE+Y NDAG QI TLA S  
Sbjct: 121 MLVEFVSANPTGPLHVGHGRQAALGDAICNLYQTQGWAVYREFYYNDAGVQIGTLASSTQ 180

Query: 183 WRYQQALYNNDSDLPEG----YYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIV 233
            R +      D + P G     Y G Y+  +  +   K              + + L  +
Sbjct: 181 LRAR-GFKPGDPEWPSGENAAAYNGDYIADIAADYLAKKTVHSDDRAFTASGDVEALDDI 239

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++V  +      DLKA  +  D +  E   +      + D++  L   G  YE     
Sbjct: 240 RLFAVAYLRHEQDLDLKAFAVHFDNYYLESSLY--LSGKVDDVVKRLHDAGKTYEH---- 293

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                          L  +ST  GDD DR + K DGSYTYF  D+AY   K+ERGF+ ++
Sbjct: 294 ------------DGALWLKSTEYGDDKDRVMRKGDGSYTYFVPDVAYHISKWERGFEKVV 341

Query: 354 YVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + G+DH G + R+ A   A  V   K   + +L  +VR+ R G  +K+SKRAG ++TLR
Sbjct: 342 NIQGTDHHGTIARVRAGLQAANVGIPKGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLR 401

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +++    D+VRF +L RK      FD      ++ +NPV+YVQYA+AR  S+    ++ 
Sbjct: 402 DLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAKNNDNPVYYVQYAHARICSVLAAWREK 461

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                  L   ++ P +S    + L     LA+YP ++  A     P+ + FYL +LA+ 
Sbjct: 462 EGGDVASLGQADLSPLQSPQALALLL---LLAKYPEMLTAAAAGFAPHDVTFYLRELAAC 518

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +H ++   R       +  ++  +   RL LV A A ++++GL ++GV +P +M
Sbjct: 519 YHSYYDAER-------ILVDDDLIKRARLALVAATAQVLHNGLAVLGVSAPQKM 565


>gi|297243030|ref|ZP_06926968.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889241|gb|EFH27975.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 598

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 178/624 (28%), Positives = 309/624 (49%), Gaps = 76/624 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  ++   K++    K            +++ + RP+D AHG  +TN AM L++  G+ 
Sbjct: 6   LSELIEKIAKDLVASGKAGSLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AEL    ++    + SV +AG GFIN+ L  +    ++  ++  G ++G+N    G
Sbjct: 66  PSDLAELFAESLQEAEGIASVEVAGPGFINITLDSASAAAVVDEVLKQGADFGKNTHLSG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223
           +             + P   Y G Y+  +   +  +  ++ ++                 
Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADAVIKEAQADGVDVLSLPRIDLGKDEEGLP 239

Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               + +     +  +V  M   IR  ++   +  D++  E+  +  +   +   I +L 
Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVDFDVWFHENSLY--EDGEVERAIADLR 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G ++E                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 298 SRGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+ AA  +K  + + +L+ +LV + +DG P
Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKP 401

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ IT+  +VD +G D+ R+ +     +  +D D   +   S +NPV+YVQYA
Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A D    +  D    +++  E++      +++  LA++P  +  A   + 
Sbjct: 462 HARSCNVARNAADAG--ITQDGADLSLLNTEADG-----EVLAALAQWPAALAQAGDLRA 514

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561
           P+++A YL DLA+ +H  ++  R  P                  R  +         RL+
Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELTDPENRLPEAEREAQRIAKCPEPARAAARLK 574

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AV ++I +GL+++GV +P +M
Sbjct: 575 LNAAVRTVIATGLDLLGVSAPEKM 598


>gi|163785199|ref|ZP_02179881.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879532|gb|EDP73354.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 517

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 201/544 (36%), Positives = 318/544 (58%), Gaps = 29/544 (5%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
             + IE P++   G  S NAA +L++ L   PL IA  I   ++ +   + V +AG GFI
Sbjct: 1   KNLKIETPKEEKFGDFSINAAFLLTKYLKKKPLEIANQIKEILEKEDIFEKVEVAGAGFI 60

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL+LS  + +  L   VV G  YG  +     K+N+EFVSANPTGP+H+GH R AVVG+ 
Sbjct: 61  NLFLSTKFFQPFLHKAVVHGDRYGEKINKDKGKINVEFVSANPTGPLHLGHGRGAVVGNA 120

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L++++++SGYEV +E+YINDAG QI  L  S++ RY+Q +   D   PE  Y G Y+K +
Sbjct: 121 LSNILSYSGYEVVKEFYINDAGNQIRKLGESIYARYRQ-IEQPDFPFPEDGYHGNYIKEI 179

Query: 210 GKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            K++      ++L F  E + +  + +Y    ++  I++DLK +N++ DI+ SE + ++ 
Sbjct: 180 AKDIYYHEREKVLTFLDESQAVEWMAEYGKNILLDRIKEDLKLINVEFDIWFSEKELYK- 238

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               ++++I+ L  +G VYE                    L  ++T+ GDD DR L KSD
Sbjct: 239 -TGKVQEVINYLQEKGLVYE----------------KDGALWLKTTLYGDDKDRVLKKSD 281

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G+YTYFA D+AY   K++R +   I + G+DH GY  RL+A   A+   +  + VL  +L
Sbjct: 282 GTYTYFAGDIAYHYDKFKRSYKQAINIWGADHHGYFPRLKAAVMALGASENWLQVLFIQL 341

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L+++G  +KMSKRAG+FITLR +V EVG+D+V +  L + ++  L+FD     ++S E
Sbjct: 342 VKLFKNGKEVKMSKRAGEFITLRDLVIEVGADAVIYFFLSKDSNTHLNFDIDLATKKSSE 401

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NPVFYVQYA+AR  S+FR+AK+    L  +      +  E   + +E  L+  ++  P  
Sbjct: 402 NPVFYVQYAHARITSVFREAKE---KLGIEANLIEDVNIELLKEKAEKDLMKKISTIPED 458

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I N    ++P+K+    YDLAS FH ++++       +F+  N+ +LT  RL L+ AV +
Sbjct: 459 IYNIAEQKQPHKITNLAYDLASKFHYYYNN------YKFLNENDEELTKARLYLLRAVRN 512

Query: 569 IINS 572
            + +
Sbjct: 513 TLRT 516


>gi|269976850|ref|ZP_06183824.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934681|gb|EEZ91241.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 559

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 45/590 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + + R+   L  +  +  ++   +D   ++ +ERP+   HG  +TN AM L++  G+ P 
Sbjct: 5   ELTKRIIAALTVVAKENSLDLNEVDLGAKVKVERPKSREHGDWATNIAMQLAKTAGVKPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE+ V  I     V+S  +AG GFIN+ L       +++ I+ +G  +G+N   +G  
Sbjct: 65  DLAEMFVKAISGIEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQH 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA LM  SG +VTREYY ND G QI+  A S+ 
Sbjct: 125 INLEYVSANPTGPIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238
              +          PE  Y G Y+  +  ++  +       +    P+       + + V
Sbjct: 185 AAARGL------PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M   I+  L     + D+F  E+  +  +   +   I+ L   G +            
Sbjct: 239 TLMFSEIKAALAKFRTEFDVFFHENSLY--ETGKVEAAIEFLDGLGEIAH---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                         +T  GDD DR L+KSDG+  YFAAD+AY++ K ERG D  IY++G+
Sbjct: 287 ------KDGATWLLTTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  +     + +L+ +LV LYR G  +KMSKRAG+ +TL   V+ V
Sbjct: 341 DHHGYIGRMMAMCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       LD D   +   + ENPV+YVQYA+AR  ++ + A         
Sbjct: 401 GVDAARYSLVRSSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAAAHGVSRGA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +            +LI  LA++P  +  A   + P+ +A YL +LA  +H  + 
Sbjct: 461 GFDPGQLCAAADG------ELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYG 514

Query: 538 HGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P       ++         L L  AV  ++ +GLN++GV +P  M
Sbjct: 515 KRRVTPA-----GDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559


>gi|308235657|ref|ZP_07666394.1| arginyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311115202|ref|YP_003986423.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946696|gb|ADP39400.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 598

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 177/624 (28%), Positives = 309/624 (49%), Gaps = 76/624 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  ++   K++    K            +++ + RP+D AHG  +TN AM L++  G+ 
Sbjct: 6   LSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AEL   R++    +  V +AG GFIN+ L  +    ++  ++  G ++G+N    G
Sbjct: 66  PHDLAELFAERLQEAQGIARVEVAGPGFINITLDSASAAAVVDEVLKQGADFGKNEHLGG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223
           +             + P   Y G Y+  +   +  +  ++ ++                 
Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADAVIKEAQADGVDVLSLPRIDLGKDEEGLP 239

Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               + +     +  +V  M   IR  ++   +  D++  E+  +  +   +   I +L 
Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVGFDVWFHENSLY--EDGEVERAIADLR 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G ++E                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 298 ERGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ ++V + +DG P
Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGENMQILIGQMVNVMKDGKP 401

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ IT+  +VD +G D+ R+ +     +  +D D   +   S +NPV+YVQYA
Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A D     D      +++  E++      +++  LA++P  +  A   + 
Sbjct: 462 HARSCNVARNAADAGISADG--ADLSLLNTEADG-----EVLAALAQWPAALAQAGDLRA 514

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561
           P+++A YL DLA+ +H  ++  R  P                  R  +         RL+
Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELSDPENRLPEAEREAQRIAKCPEPARAAARLK 574

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AV ++I SGL+++GV +P++M
Sbjct: 575 LNEAVRTVIASGLDLLGVSAPDKM 598


>gi|193213680|ref|YP_001999633.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|229558753|sp|B3QLU7|SYR_CHLP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193087157|gb|ACF12433.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 551

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 174/575 (30%), Positives = 286/575 (49%), Gaps = 36/575 (6%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           +++   K  +E      I I++P D   G  STN A +L++    +P  +A  ++     
Sbjct: 9   IQDALHKAGIETD--KEIQIDKPNDKKFGDFSTNIAFLLAKEARKNPRELATQLIGLFAF 66

Query: 75  -DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
            +  V    +AG GFIN +L+P++  +    ++  G ++G    GKG K  +E+VSANPT
Sbjct: 67  PEGTVTKTEVAGPGFINFHLAPAFFMRSAQEVLTQGEKFGCTESGKGQKAIVEYVSANPT 126

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
           GP+ +G  R  V+GD +A+L+   GYEVTREYY NDAG Q+  LA SV +RY +      
Sbjct: 127 GPLTIGRGRGGVLGDCIANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQT 185

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            + PE +Y G Y+  +   L  ++S EL +  E   L I K+ +   +   IR  L+ + 
Sbjct: 186 VEFPETHYQGDYIGEIAGTLFIEHSDELASSDE---LGIFKETAEAVIFSSIRRTLERIG 242

Query: 254 IQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           I HD F +E   +    G+ S  + +ID L  + ++                        
Sbjct: 243 ITHDSFFNEHTLYQWNEGEASGNQKVIDALEAKDFI----------------GRYDGATW 286

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F +T +G + D+ L+KS G  +Y   D+AY   K+ERGFD M+ V G+DH      +   
Sbjct: 287 FMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEA 346

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              +    +++ + + + V     G  +KMS R G+   L  ++++VG+D+ R   + R 
Sbjct: 347 LKILGYDASKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIEDVGADATRLFFIMRS 406

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               L+FD    K+QSK+NPVFY+QYA+AR  S+ R A+    ++ FD            
Sbjct: 407 KDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRLAE---KEVGFDEAAATGASLPLL 463

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ L   L ++P VI++     EP K+  YL+ +A  +H  +   +E P L+    
Sbjct: 464 DSEPEIDLASALLDFPDVIQSCLRLLEPQKMVEYLHTVAERYHKFY---QECPILK---- 516

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +   RL+L   V  ++ +G  I+G+ +P  M
Sbjct: 517 ADENIRTARLELSLTVRQVLRNGFRILGISAPESM 551


>gi|306819519|ref|ZP_07453226.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701227|ref|ZP_07638249.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|304647811|gb|EFM45129.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307613621|gb|EFN92868.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 559

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 45/590 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + + R+   L  +  +  ++   +D   ++ +ERP+   HG  +TN AM L++  G+ P 
Sbjct: 5   ELTKRIIAALTVVAKENSLDLNEVDLGAKVKVERPKSREHGDWATNIAMQLAKTAGVKPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE+ V  I     V+S  +AG GFIN+ L       +++ I+ +G  +G+N   +G  
Sbjct: 65  DLAEMFVKAISGIEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQH 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA LM  SG +VTREYY ND G QI+  A S+ 
Sbjct: 125 INLEYVSANPTGPIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238
              +          PE  Y G Y+  +  ++  +       +    P+       + + V
Sbjct: 185 AAARGL------PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M   I+  L     + D+F  E+  +  +   +   I+ L   G +            
Sbjct: 239 TLMFSEIKAALAKFRTEFDVFFHENSLY--ETGKVEAAIEFLDGLGEIAH---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                         +T  GDD DR L+KSDG+  YFAAD+AY++ K ERG D  IY++G+
Sbjct: 287 ------KDGATWLLTTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  +     + +L+ +LV LYR G  +KMSKRAG+ +TL   V+ V
Sbjct: 341 DHHGYIGRMMAMCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       LD D   +   + ENPV+YVQYA+AR  ++ + A         
Sbjct: 401 GVDAARYSLVRSSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAASHGVSRGA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +            +LI  LA++P  +  A   + P+ +A YL +LA  +H  + 
Sbjct: 461 GFDPGQLRAAADG------ELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYG 514

Query: 538 HGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P       ++         L L  AV  ++ +GLN++GV +P  M
Sbjct: 515 KRRVTPA-----GDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559


>gi|124514654|gb|EAY56166.1| Arginyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 595

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 206/597 (34%), Positives = 309/597 (51%), Gaps = 29/597 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L++YL+E      +   +   I +E P+    G +ST  AM LS  L   P  IAE
Sbjct: 10  ISDALRSYLQERGQGEDLATLLPKGIRLEFPKKDGFGDISTPVAMHLSAHLKTPPRKIAE 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            + + +   P   SV IAG G++N   S   +RK L  I+ +  +       K  +V +E
Sbjct: 70  SLSSFLSGSPLFQSVEIAGPGYLNFTYSEMSVRKTLLRILDTDSDLVFPEDEK-RRVLVE 128

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--VFWR 184
           FVSANPTGP+HVGH R A  GD L+ ++   G++VT EYYINDAG Q+  L  S  + WR
Sbjct: 129 FVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCLAWR 188

Query: 185 YQQALYNNDSD--LPEGY--YPGVYLKHVGKELAD-------KYSSELLN--FPEEKWLP 231
                     +    +G   Y G Y++ + +E+ D       + S   L+   PE  +L 
Sbjct: 189 KLHRAVPESEEQAFLKGATPYKGDYIREIAQEMIDTPGILSPEESRAALDPEAPETLYLG 248

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              +Y+   +M+ IR+DL   ++  D F SE   H        D +     +  + E  +
Sbjct: 249 TFTEYAQGRIMEGIREDLHLFDVPFDAFFSEKILHEKKNGKNSDAVTLWINR--IREASM 306

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                +     + +   L  R+T++GDD DR LL+SDG  TYFAAD+AY   K ER FD 
Sbjct: 307 QASDPEVPDVYESE-GALWLRTTVLGDDKDRVLLRSDGRLTYFAADIAYHALKIERKFDV 365

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +I V G+DH GY+ R+ A    +S   +   +  V L +LV L RDG P+ MS R G+F+
Sbjct: 366 LIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMSTRGGEFV 425

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR V+DEVG D+ RF  L R +   L+FD  K KE+S +NPV+YVQYA+AR +S+ RQA
Sbjct: 426 TLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVKSLLRQA 485

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                 L  +   R++   E+  + +E  L+  L  +  V+ + +   E + +  YL DL
Sbjct: 486 DTRGLSLPSEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTMEVHPMTEYLTDL 542

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  +H  + H R   +    +  +R+LT  R+ L  AV  ++  GL ++G+ +P  M
Sbjct: 543 AGRYHHFYFHHRILSQ----EPQDRELTTARIALSIAVGRVLEKGLGLLGISAPEVM 595


>gi|194335027|ref|YP_002016887.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|229470732|sp|B4S6D8|SYR_PROA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194312845|gb|ACF47240.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 551

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 183/583 (31%), Positives = 293/583 (50%), Gaps = 36/583 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   +++      +E      I IE+P +   G  STN A+ L++    +P  +AE
Sbjct: 1   MQEYLIASIQQALLASGIEP--PKEITIEKPSNKQFGDFSTNIALTLAKECRKNPRQLAE 58

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I A+++  P+  D   IAG GFIN YL+P+++ + +  ++  G ++G+   GKG K  +
Sbjct: 59  EISAKLEFRPETVDKTTIAGPGFINFYLTPAFIMQSVEQVLNEGDQFGKTCTGKGQKAIV 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+ +G  R  V+GD +A+L+   GY+VTREYY NDAG Q+  LA SV  RY
Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLLESQGYKVTREYYFNDAGRQMTILAESVRLRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +         P+ +Y G Y+  +  +L +K+  EL    +   L   K  +   +   I
Sbjct: 179 LE-CCGEAIAFPDTHYQGDYISDIAAKLFEKHGVELKEVSQ---LDEFKQIAETYIFASI 234

Query: 246 RDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           ++ L  LNI HD F +E   ++      SP   +ID L + GY+                
Sbjct: 235 KNTLHRLNIHHDSFFNEHKLYQTGQNGKSPNEQVIDALDKAGYISNY------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 + F +T +G + D+ L+KS G  +Y   D+AY   KYER F  +I V G+DH  
Sbjct: 282 ---DGAVWFTTTKLGQEKDKVLIKSTGEPSYRLPDIAYHVTKYERAFSEIINVFGADHID 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               +      +     +I V + + V    +G  +KMS R G+   L  ++D+VG+D+ 
Sbjct: 339 EYPDVIEALRILGYDPGRIKVAINQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADAT 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R   + R     L+FD    K+QS++NPVFY+QYA+AR  S+ + A+    ++ F     
Sbjct: 399 RLFFIMRSKDSHLNFDVELAKKQSRDNPVFYLQYAHARICSLVKLAE---QEIGFTQSDI 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            V   ++     ELQL + L ++P VI +A    EP K+  YL+ +A ++H  +   +E 
Sbjct: 456 GVHLMQNLDSPHELQLGLALLDFPEVISSAVRMLEPQKMVEYLHHVAELYHRFY---QEC 512

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L+        +   RL L  A   ++ +G  I+GV +P  M
Sbjct: 513 PILK----AEPDICKARLFLSLATRQVLQNGFRILGVTAPTAM 551


>gi|227876244|ref|ZP_03994360.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227843205|gb|EEJ53398.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 559

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 45/590 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + + R+   L  +  +  ++   +D   ++ +ERP+   HG  +TN AM L++  G+ P 
Sbjct: 5   ELTKRIIAALTVVAKENSLDLNEVDLGAKVKVERPKSREHGDWATNIAMQLAKTAGVKPR 64

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE+ V  I     V+S  +AG GFIN+ L       +++ I+ +G  +G+N   +G  
Sbjct: 65  DLAEMFVKAISGIEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQH 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+G  R A VGD+LA LM  SG +VTREYY ND G QI+  A S+ 
Sbjct: 125 INLEYVSANPTGPIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLL 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238
              +          PE  Y G Y+  +  ++  +       +    P+       + + V
Sbjct: 185 AAARGL------PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M   I+  L     + D+F  E+  +  +   +   I+ L   G +            
Sbjct: 239 TLMFSEIKAALAKFRTEFDVFFHENSLY--ETGKVEAAIEFLDGLGEIAH---------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                         +T  GDD DR L+KSDG+  YFAAD+AY++ K ERG D  IY++G+
Sbjct: 287 ------KDGATWLLTTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGA 340

Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           DH GY+ R+ A+ AA  +     + +L+ +LV LYR G  +KMSKRAG+ +TL   V+ V
Sbjct: 341 DHHGYIGRMMAMCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAV 400

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+ R+ ++       LD D   +   + ENPV+YVQYA+AR  ++ + A         
Sbjct: 401 GVDAARYSLVRSSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAAAHGVSRGA 460

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
              P  +            +LI  LA++P  +  A   + P+ +A YL +LA  +H  + 
Sbjct: 461 GFDPGQLRAAADG------ELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYG 514

Query: 538 HGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R  P       ++         L L  AV  ++ +GLN++GV +P  M
Sbjct: 515 KRRVTPA-----GDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559


>gi|219683104|ref|YP_002469487.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782942|sp|B8DWR0|SYR_BIFA0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219620754|gb|ACL28911.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|289177559|gb|ADC84805.1| Arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 598

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/614 (29%), Positives = 306/614 (49%), Gaps = 72/614 (11%)

Query: 13  NYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           N + E        +++ D  +  + RP+D AHG  ++NAAM L++  G+ P  +A+L   
Sbjct: 16  NLVSEGKAGTLTAEELPDSAKFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFAD 75

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     + +V +AG GFIN+ L  +    ++  ++  G  +G+N    G  +N+EFVSA
Sbjct: 76  ALNGTDGIAAVEVAGPGFINITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSA 135

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+G  R A VGD++A ++  +G  V REYY ND G QIN  A S+         
Sbjct: 136 NPTGPIHIGGTRWAAVGDSMARILQANGATVVREYYFNDHGEQINRFAKSLVAAAH---- 191

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELLNFPEEKWLP 231
             D   P   Y G Y+  + + +  + ++                   E L   + +   
Sbjct: 192 --DEPTPVDGYKGAYIDEIARRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQRE 249

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   IR  +K   +  D++  E+  +  +   +   I +L   G +YE   
Sbjct: 250 EFRKRAVPMMFDEIRQSMKEFRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE--- 304

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
                              F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R    
Sbjct: 305 -------------KDGATWFESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDP 351

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  +K  + + +L+ ++V + +DG P++MSKRAG+ 
Sbjct: 352 ADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNI 411

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  ++D +G D+ R+ +     +  +D D   +   S +NPV+YVQYA+AR  ++ R 
Sbjct: 412 VTIDDLIDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRN 471

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A+        +    ++   ++E D    ++I  LA++P ++  A   + P+++A YL D
Sbjct: 472 AE----AAQINAADADLSLLDTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLED 524

Query: 528 LASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQLVHAVASIIN 571
           LA+ +H  ++  R  P                R R  +         RL+L  AV ++I 
Sbjct: 525 LAAAYHKWYNVERVVPMPLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIA 584

Query: 572 SGLNIIGVESPNEM 585
            GL+++GV +P++M
Sbjct: 585 EGLDLLGVTAPDKM 598


>gi|183602799|ref|ZP_02964162.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241191434|ref|YP_002968828.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196840|ref|YP_002970395.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218037|gb|EDT88685.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249826|gb|ACS46766.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251394|gb|ACS48333.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295794427|gb|ADG33962.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 590

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/614 (29%), Positives = 306/614 (49%), Gaps = 72/614 (11%)

Query: 13  NYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           N + E        +++ D  +  + RP+D AHG  ++NAAM L++  G+ P  +A+L   
Sbjct: 8   NLVSEGKAGTLTAEELPDSAKFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFAD 67

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +     + +V +AG GFIN+ L  +    ++  ++  G  +G+N    G  +N+EFVSA
Sbjct: 68  ALNGTDGIAAVEVAGPGFINITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSA 127

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP+H+G  R A VGD++A ++  +G  V REYY ND G QIN  A S+         
Sbjct: 128 NPTGPIHIGGTRWAAVGDSMARILQANGATVVREYYFNDHGEQINRFAKSLVAAAH---- 183

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELLNFPEEKWLP 231
             D   P   Y G Y+  + + +  + ++                   E L   + +   
Sbjct: 184 --DEPTPVDGYKGAYIDEIARRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQRE 241

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +  +V  M   IR  +K   +  D++  E+  +  +   +   I +L   G +YE   
Sbjct: 242 EFRKRAVPMMFDEIRQSMKEFRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE--- 296

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348
                              F ST  GDD DR ++KSDG+Y YFAAD+AY++ K  R    
Sbjct: 297 -------------KDGATWFESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDP 343

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407
            D  IY++G+DH GY+ R+ A+ AA  +K  + + +L+ ++V + +DG P++MSKRAG+ 
Sbjct: 344 ADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNI 403

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +T+  ++D +G D+ R+ +     +  +D D   +   S +NPV+YVQYA+AR  ++ R 
Sbjct: 404 VTIDDLIDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRN 463

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A+        +    ++   ++E D    ++I  LA++P ++  A   + P+++A YL D
Sbjct: 464 AE----AAQINAADADLSLLDTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLED 516

Query: 528 LASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQLVHAVASIIN 571
           LA+ +H  ++  R  P                R R  +         RL+L  AV ++I 
Sbjct: 517 LAAAYHKWYNVERVVPMPLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIA 576

Query: 572 SGLNIIGVESPNEM 585
            GL+++GV +P++M
Sbjct: 577 EGLDLLGVTAPDKM 590


>gi|308177030|ref|YP_003916436.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744493|emb|CBT75465.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 547

 Score =  502 bits (1292), Expect = e-139,   Method: Composition-based stats.
 Identities = 186/581 (32%), Positives = 310/581 (53%), Gaps = 39/581 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S+ +   L E     ++  ++ + + ++RP+   HG  +TN A+ L +  G+ P   A
Sbjct: 5   ELSAAISACLTEAVAAGEISVEVPETVRVDRPKSREHGDWATNIALQLGKKAGMAPRDFA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +++  R+   P V +V IAG GF+N+ L      ++  +IV +G  YG N    G  VN+
Sbjct: 65  QILATRLASVPGVGAVDIAGPGFLNITLEAGAAGELARTIVEAGSAYGSNEALAGHVVNM 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTGP+H+GH R A +GD ++ ++  SG  VT EYYINDAG Q+N  A SV+ R 
Sbjct: 125 EFVSANPTGPLHIGHTRWAALGDAISRVLRASGASVTSEYYINDAGNQMNVFARSVYNRI 184

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                     +PEG YPG Y+K +G  +  + + EL +  E + +P ++D + +A +  I
Sbjct: 185 HGL------PVPEGGYPGEYIKELGDAVLAE-NPELKDLEEAEAIPALRDAAYKAQLADI 237

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L    +  D+F SE   H  +   + D +  L  QG++++                 
Sbjct: 238 KSTLADFGVSFDVFFSETTLH--ERGAVADAVARLREQGHIFDL---------------- 279

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  R+T  GDD DR L++++G  TYFAAD AY+  K +RGF+  IY++G+DH GYV 
Sbjct: 280 EGAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFEEKIYLLGADHHGYVN 339

Query: 366 RLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           RL+A+AA   + K + I VL+ +L+ +       K+SKRAG+ I LR +++ +G+D++R+
Sbjct: 340 RLKAIAACAGDDKDKNIEVLIGQLISV----NGAKLSKRAGNIIELRDLINWIGADALRY 395

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +        +  D  ++K+ + +NPVFYVQYA+AR       +     +       RN 
Sbjct: 396 SLARFPADSPIALDPEQLKKNTNDNPVFYVQYAHAR-------SAAAARNAAAKGVTRND 448

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E +L+  L ++P V+  +   +EP+++A YL  +A  +H  ++  R  P 
Sbjct: 449 FDAALLTDPTENELLAVLGQFPSVVAGSAEFREPHRIARYLEQVAGAYHSWYAATRITPM 508

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     +   RL L  A  +++ +GL ++GV +P  M
Sbjct: 509 GE--DEAIAPVHGTRLWLNDAATTVLANGLELLGVSAPERM 547


>gi|325679007|ref|ZP_08158605.1| arginine--tRNA ligase [Ruminococcus albus 8]
 gi|324109511|gb|EGC03729.1| arginine--tRNA ligase [Ruminococcus albus 8]
          Length = 589

 Score =  501 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 187/610 (30%), Positives = 302/610 (49%), Gaps = 57/610 (9%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F      + N +  +  +     + +    IE P D  +G +STNAAM+ ++P    P  
Sbjct: 9   FTQARELVMNAMGALVAEGVFPAEAVPAFNIEIPADSKNGDVSTNAAMVCAKPFRNAPRK 68

Query: 64  IAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE IV +I  +    + V IAG GFIN + +  +   ++ +++ +G +YG+   GKG +
Sbjct: 69  IAEAIVGKIVTEGSCFEKVEIAGPGFINFFYNKGWYASVVKAVLDAGADYGKTEFGKGKR 128

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +EFVSANPTGPMH+G+ R   +GD LA++M ++GYEV RE+YINDAG QI     S+ 
Sbjct: 129 ALVEFVSANPTGPMHIGNARGGAIGDCLAAVMEYAGYEVEREFYINDAGNQIEKFGKSLR 188

Query: 183 WRYQQ---------------------ALYNNDS-----DLPEGYYPGVYLKHVGKELADK 216
            RY Q                      +Y  D       +P+  Y G+ +    K   D+
Sbjct: 189 LRYMQICSEAGQAIVAKNLDLDAFCKEIYGEDGNRPEFPMPDDVYLGMDIIAHAKNFFDE 248

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           Y       PEE     + DY++   ++ + DDL    I++D +  E   H  +   +  +
Sbjct: 249 YGMIASAQPEEDCKKALVDYALPKNIQGLHDDLAKYRIEYDTWFRESTLH--NDGSVAKV 306

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I+ L   GY YE                    L F++T  GD+ DR L++ +G  TYF  
Sbjct: 307 IEQLKASGYTYE----------------QDGALWFKTTEFGDEKDRVLVRDNGIPTYFVP 350

Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+AY   K  ER FD  I + G+DH GY+ RL+A   A+     ++++++ ++VRL ++G
Sbjct: 351 DIAYHYNKLAERKFDKAIDIFGADHHGYIPRLKAAMTALGVDAKKLDIVIMQMVRLVKNG 410

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              K+SKR+G  ITL  +++E+  D+ RF    R+ +   DFD       S +NPV+YVQ
Sbjct: 411 ETYKLSKRSGKAITLNTLLEEIPIDAARFFFNLREPNSQFDFDLDLAISNSSQNPVYYVQ 470

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR  S+ ++ K+   +             E+   + EL+L+  +A  P  I +A  A
Sbjct: 471 YAHARICSVIKKLKEEGVEA----KAFTDEMAEALNTSEELELVKLMATLPTTINDAAKA 526

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P K+  Y  D+A+++H  ++  R       ++     +   RL L  AV  II + L 
Sbjct: 527 YDPAKVTKYAVDIATLYHKFYNACR-------IKGEPENVMQARLSLSLAVKQIIANILG 579

Query: 576 IIGVESPNEM 585
           ++ +  P  M
Sbjct: 580 MLKINCPESM 589


>gi|296137179|ref|YP_003644421.1| arginyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295797301|gb|ADG32091.1| arginyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 595

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 188/613 (30%), Positives = 302/613 (49%), Gaps = 58/613 (9%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  +F++RL   L++      ++ +    I + RPR   HG L++N AM L++PL  +P 
Sbjct: 11  IMIEFTARLTTALQQAATA--LQPEFSGSIELSRPRSDDHGELASNLAMQLAKPLKRNPR 68

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +A+ I+  ++ + D    +    IAG GFIN +L  + L++++  +     ++G +  G
Sbjct: 69  DVAQQIIDALRTNADLAEGIARTEIAGPGFINFHLHAAVLQQVIVEVEQGAAKFGHSRAG 128

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +   + +EFVSANPTGP+HVGH R   +GD +A+++   G+ V RE+Y NDAG QI TLA
Sbjct: 129 REQPMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLA 188

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPI 232
           LSV  R +      D+  PE  Y G Y+  + ++        D     ++   +   L  
Sbjct: 189 LSVQARAR-GYKPGDAQWPESAYNGDYIADIARDFLACESVPDDQGQPIVANGQADDLDN 247

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ ++V  + +    DLK   I+ D +  E   +      + D +  L   G+ YE    
Sbjct: 248 IRRFAVAYLRREQDLDLKTFGIRFDNYYLESSLYT--DGRVEDAVQRLQASGHTYE---- 301

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                           L  R+T  GDD DR + KSDG+YTYF  D+AY   K++RGF   
Sbjct: 302 ------------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFHRA 349

Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + + GSDH G + R+ A   A+         + +L ++V + R G  +K+SKRAG ++T+
Sbjct: 350 VNIQGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYVTV 409

Query: 411 RHVVDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           R +++                    G D+VRF ++ RK      FD      QS ENPV+
Sbjct: 410 RDLIEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENPVY 469

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR  S+F Q     P                     E  L++ LA YP+V+  A
Sbjct: 470 YVQYAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPRERALLLTLARYPQVLAAA 529

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+++AFYL DLA+ FH  ++  R       V  +   L   RL+L+ AV  ++++
Sbjct: 530 AQELAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHARLRLLRAVRQVMHN 582

Query: 573 GLNIIGVESPNEM 585
            L ++GV +P  M
Sbjct: 583 ALAVLGVSAPQRM 595


>gi|119896671|ref|YP_931884.1| arginyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166232755|sp|A1K2E2|SYR_AZOSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119669084|emb|CAL92997.1| putative arginine-tRNA ligase [Azoarcus sp. BH72]
          Length = 587

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 203/622 (32%), Positives = 313/622 (50%), Gaps = 74/622 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + AD    L + +K     +  E      I++ERP+  +HG  +TN A+ L++PL  +P 
Sbjct: 1   MSADPKVLLTDLIKTALKSVAPEHADT-AILLERPKQASHGDFATNVALQLAKPLKRNPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A L++A +     V    +AG GFIN  L+ +    ++  ++  G ++GR    K  K
Sbjct: 60  ELAALLLAELPASNLVAKTEVAGAGFINFTLAAAAKTAVVGEVLAKGADFGR-GAKKNVK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G +L+ ++ F+GY+VTREYY+NDAG Q++ LALS +
Sbjct: 119 VQVEFVSANPTGPLHVGHGRGAAYGASLSDVLCFAGYDVTREYYVNDAGRQMDILALSTW 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL------------------LNF 224
            RY  AL+  D   P   Y G Y+  + + L D +                         
Sbjct: 179 LRYL-ALFGIDVPFPPNAYQGDYVIDMARGLRDAHQGRYAGVTLAQVLEGTPGLPVAERK 237

Query: 225 PEE---------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            +E                     +  P V  +++   +   RDDL+   +  D + SE 
Sbjct: 238 DDEAKQQRELHLDGLIANAKRLLGEDYPFVHGFALNEQLGDGRDDLQEFGVHFDKWFSEK 297

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                D   +   +  L ++G++Y                +      FRST  GD+ DR 
Sbjct: 298 SLF--DTGLVERAVAELEKRGHIY----------------VQDGAKWFRSTDFGDEKDRV 339

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           + + +G YTYFA+D+AY   KYERGFD +I + G+DH GY+ R++   AA+     ++ V
Sbjct: 340 VQRENGLYTYFASDIAYHLNKYERGFDRIIDIWGADHHGYIPRVKGAIAALGLPPEKLEV 399

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            L +   LYRDG    MS R+G+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K
Sbjct: 400 ALVQFAVLYRDGQKTSMSTRSGEFVTLRELRREVGNDACRFFYVLRKSDQHLDFDLDLAK 459

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            QS ENPV+Y+QYA+AR  S+  Q      +L      +         +  EL L   LA
Sbjct: 460 SQSNENPVYYIQYAHARVCSVLNQWGGEPAELQAADLGK-------LENERELALCARLA 512

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +P V++ A     P+++AFYL DLA+ FH  ++  R       +  ++  + + RL L 
Sbjct: 513 GFPEVVQGAAADYAPHQIAFYLKDLAADFHSWYNAER-------MLVDDEAVKLARLALA 565

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV S++  GL ++GV +P  M
Sbjct: 566 AAVRSVLRGGLAVLGVSAPESM 587


>gi|261368273|ref|ZP_05981156.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569790|gb|EFB75325.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 585

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 187/583 (32%), Positives = 293/583 (50%), Gaps = 19/583 (3%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            + L +  K    +  + +  L   ++E P D  +G +++N AM  +R     P  IAE 
Sbjct: 17  RTLLTDAAKAAMAEGTLPQADLPDFIVEIPADVKNGDVASNLAMAGARVFHKAPRQIAEA 76

Query: 68  IVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I A++ ++      V IAG GFINL+L   +   +L +   +  EYGR   G G + N+E
Sbjct: 77  ITAKLDLNGTLFAGVDIAGPGFINLFLGQDWFTSVLRAACAN-PEYGRTDAGAGKRYNVE 135

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGPMH+G+ R   +GD LA+ + ++GY+VTRE+YINDAG QI     S+  RY 
Sbjct: 136 FVSANPTGPMHMGNARGGALGDCLAACLDWAGYDVTREFYINDAGNQIEKFGKSLAIRYL 195

Query: 187 QALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           Q     ++  LP   Y G  +    KE A+ +    +N   E+    +   ++   +  +
Sbjct: 196 QLYKGEEACPLPAECYQGADIIQRAKEFAEVHGDAYVNADFEELKKAIVADALPKNIAGL 255

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DL    IQ+D++  E D H+     ++ ++D L   G  Y+        ++ Q     
Sbjct: 256 QRDLGKYRIQYDVWFHESDLHK--SGAVQAVVDKLLETGACYKAEDGAIMYRSAQYAAKY 313

Query: 306 RKQLLFRSTMVGDD--VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSG 362
                 ++    ++   D  L++++G  TYFAAD+AY   K   RGFD  I V G+DH G
Sbjct: 314 GVANKRKTEDGSEEEAKDEVLVRANGIPTYFAADIAYHYNKLAVRGFDKAIDVWGADHHG 373

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R++    A+     Q++V+L ++V L RDG P++MSKR G  ITL  ++DEV  DS 
Sbjct: 374 HVARMKGAMDAIGLHGEQLDVVLMQMVNLMRDGKPVRMSKRTGKAITLTDLLDEVPIDSA 433

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF    R++S  LDFD         ENPV+YVQYA+AR  S+ ++ ++            
Sbjct: 434 RFFFNQRESSSTLDFDLDLAVRNDSENPVYYVQYAHARICSLLKKLEEQG----VAFQGV 489

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           + I      D SE  LI  LA +P  I  A    +P ++  Y  D+A+ FH  ++  R  
Sbjct: 490 DSIDASVLTDPSEQALIRLLAAFPAEIVAAADKYDPARITRYCIDVATAFHRFYNACR-- 547

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +      +   R+ L  AV  +I++ L +  V +P  M
Sbjct: 548 -----ILDAEGAVQQNRIALSLAVRGVIHNILTMFKVNAPESM 585


>gi|291544037|emb|CBL17146.1| arginyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 562

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 184/590 (31%), Positives = 300/590 (50%), Gaps = 36/590 (6%)

Query: 2   YLFADFSSRLKNYL----KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            L    S +L+  L      +     V  + +    IE P D +HG  +TNAAM+ ++P 
Sbjct: 3   NLIKQASDQLREILLGSMGRLVASGAVPPEPVSDFKIEIPADKSHGDFATNAAMVCAKPF 62

Query: 58  GLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            + P  IAE I+  + ++    D   IAG GFIN +LSP +  +++++++     YGR  
Sbjct: 63  RMAPRAIAEKILGELVLEGTYFDRAEIAGPGFINFFLSPRWFAQVVNTVLEETGTYGRTD 122

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
            G+G +V +EFVSANPTGPMHVG+ R   +GD LASL+ ++GY+V RE+YINDAG QI  
Sbjct: 123 TGEGKRVLVEFVSANPTGPMHVGNARGGAIGDCLASLLDWAGYQVEREFYINDAGNQIEK 182

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            A S+  RY Q LY +  +LPE  Y G+ +    K  A +     ++   +     +  Y
Sbjct: 183 FATSLEVRYLQ-LYRDGVELPEDAYQGMDIVEHAKAFAAENGDRYVDADAKTRRDALVAY 241

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++   ++ ++ DL    IQ+D +  E   H      + +I+  L   GY YE        
Sbjct: 242 ALPKNIEGLKRDLGKYRIQYDTWFRESTLHA--DGSVMEIVRKLRDSGYTYE-------- 291

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                         F++T  G D D  L++S+G  TY   D+AY   K   RGFD  I V
Sbjct: 292 --------QDGATWFKATEFGADKDFVLVRSNGIPTYVVPDIAYHYNKLVTRGFDKAIDV 343

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+DH GYV RL+A   A+    ++++V+L ++V + R+G   K+SKR+G  ITL  +++
Sbjct: 344 LGADHHGYVPRLKAALTALGVDASKLDVVLMQMVFVMRNGQVAKLSKRSGKAITLVTLLE 403

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           E+  D+ RF    R+ +   +FD     E+S +NPV+YVQYA+AR  S+ R   +    +
Sbjct: 404 EIPIDAARFFFNLREANSHFEFDLDLAVEKSSQNPVYYVQYAHARICSLLRNLAEEG--I 461

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                   ++ Q ++    E++LI ++A  P+ I+ A    +P ++  Y  +LA++FH  
Sbjct: 462 QPTELTGELMQQFTQ--PQEIELIRYIAMLPQEIDTAAKHYDPSRITKYTVELATLFHKF 519

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           ++A    L              + + L ++ +  P +M
Sbjct: 520 YDACTVKNAEPQLRAARLALCAA-------TRQALANALTMLKITCPEKM 562


>gi|294341477|emb|CAZ89894.1| putative arginyl-tRNA synthetase (ArgS) [Thiomonas sp. 3As]
          Length = 584

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 190/610 (31%), Positives = 302/610 (49%), Gaps = 58/610 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F++RL   L++      ++ +  D I + RPR   HG L++N AM L++PL  +P  +A
Sbjct: 3   EFTARLTTALQQAATA--LQPEFSDSIELSRPRSDDHGELASNLAMQLAKPLKRNPRDVA 60

Query: 66  ELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + I+  ++ + D    +    IAG GFIN +L P+ L++++  +     ++G +  G+  
Sbjct: 61  QQIIDALRTNADLAEGIARTEIAGPGFINFHLHPAVLQQVIVEVEQGAAKFGHSRAGREQ 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +EFVSANPTGP+HVGH R   +GD +A+++   G+ V RE+Y NDAG QI TLALSV
Sbjct: 121 PMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLALSV 180

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKD 235
             R +      D+  PE  Y G Y+  + ++        D     ++   +   L  ++ 
Sbjct: 181 QARAR-GYKPGDAQWPESAYNGDYIADIARDFLACESVPDDQGQPIVANGQADDLDNIRR 239

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++V  + +    DLK   I+ D +  E   +      + D +  L   G+ YE       
Sbjct: 240 FAVAYLRREQDLDLKTFGIRFDNYYLESSLYT--DGRVEDAVQRLQASGHTYE------- 290

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        L  R+T  GDD DR + KSDG+YTYF  D+AY   K++RGF   + +
Sbjct: 291 ---------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFHRAVNI 341

Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            GSDH G + R+ A   A+         + +L ++V + R G  +K+SKRAG ++T+R +
Sbjct: 342 QGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYVTVRDL 401

Query: 414 VDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
           ++                    G D+VRF ++ RK      FD      QS ENPV+YVQ
Sbjct: 402 IEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENPVYYVQ 461

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR  S+F Q     P                     E  L + LA YP+V+  A   
Sbjct: 462 YAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPRERALQLTLARYPQVLAAAAQE 521

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+++AFYL DLA+ FH  ++  R       V  +   L   RL+L+ AV  ++++ L 
Sbjct: 522 LAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHARLRLLRAVRQVMHNALA 574

Query: 576 IIGVESPNEM 585
           ++GV +P  M
Sbjct: 575 VLGVSAPQRM 584


>gi|269468159|gb|EEZ79861.1| arginyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 570

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 181/591 (30%), Positives = 304/591 (51%), Gaps = 63/591 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     + LK  L+ +     +  +    I ++  +D  HG  ++N A++LS+     P 
Sbjct: 1   MKEQLQALLKQSLESLVND-DILSEAPKSIRLDHSKDKTHGDFASNIALVLSKQAKCSPQ 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A+ I+ R+    ++    IAG GFIN ++S      +L  I+  GI YG   IGKG  
Sbjct: 60  KLAQQIIDRLPNSGEIVKTEIAGPGFINFFMSQGSNTAVLEQILEQGIGYGCLDIGKGQS 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G T+A+L+   G++V  EYY+NDAG Q++ LA SV+
Sbjct: 120 VLLEFVSANPTGPLHVGHGRGAAYGATVANLLRALGFKVDNEYYVNDAGRQMDILATSVY 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELA---------------------DKYSSEL 221
            RY +         P+  Y G Y+  + +++                      +K+  +L
Sbjct: 180 LRYIET-----DQFPDNGYKGDYIFDIAEQVKGVERLDIFTDVCADEKDGGDKEKHIDDL 234

Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           +   ++        V D ++  ++  I+ DL    +++  + SE      D    +  I 
Sbjct: 235 IANCKQALGDDYKKVFDLAIDDILSGIKTDLSEFGVEYQQWFSEQSL--IDSGRAKTTIK 292

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +L   G++YE                    L F++T   D+ DR +++ +G +TYFA+D+
Sbjct: 293 SLQDSGHIYE----------------KDGALWFKTTDFNDEKDRVVVRDNGIHTYFASDI 336

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K+ERG+D +I + G+DH GY+ R++A   A+  K  ++ +LL +   LYR G  +
Sbjct: 337 AYHLEKFERGYDKIINIWGADHHGYIARVKASVEALGHKSEKLEILLVQFANLYRGGKKV 396

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +MS R+G F+TL+ +  EVG+D+ RF  + RK+ + +DFD    K ++ ENPVFY+QYA+
Sbjct: 397 QMSTRSGSFVTLKELRHEVGNDAARFFYVLRKSEQHMDFDLDLAKSKTNENPVFYIQYAH 456

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQE 517
           AR  S+ +QA + FP+        +  P  S  D  +E+ L+  L  Y  V++ + +  E
Sbjct: 457 ARICSVLKQADEKFPN-------NSTAPNLSLLDDKAEVALVKELNRYKDVLQTSALNYE 509

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           P+ LA+YL DL++ FH +++              + +L   RL L+ +   
Sbjct: 510 PHVLAYYLRDLSASFHSYYNSCEF-------LVEDAQLRSSRLLLIKSAKQ 553


>gi|124265346|ref|YP_001019350.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166232805|sp|A2SC26|SYR_METPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|124258121|gb|ABM93115.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 561

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 184/589 (31%), Positives = 288/589 (48%), Gaps = 43/589 (7%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              L   L +   ++  E+  +     E P+  AHG L+  +AM L++PL  +P  +A+ 
Sbjct: 5   QQELLVALGDALAELAPEQPPIAAF--ESPKQAAHGDLAITSAMQLAKPLKRNPRELAQA 62

Query: 68  IVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           ++  ++        V ++ IAG GFINL L  +  ++I++ ++ SG ++GR       + 
Sbjct: 63  LIDALQRREAVQRWVAALEIAGPGFINLRLKDTTKQQIVAEVLASGTDFGRQPATS-ERA 121

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EFVSANPTGP+HVGH R A +GD +  L    G++VTRE+Y NDAG QI TLA S   
Sbjct: 122 LVEFVSANPTGPLHVGHGRQAALGDAICKLFETQGWQVTREFYYNDAGVQIGTLAASTQA 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSV 238
           R  Q L   D+  PE  Y G Y+  +  +            E     +   L  ++ ++V
Sbjct: 182 R-LQGLKPGDAGWPESAYNGDYIADIAADFLARKTVKADDREFTASGDPADLDGIRQFAV 240

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +      DL+A  ++ D +  E   +      +   +  L   G  +E          
Sbjct: 241 AYLRHEQDLDLQAFGVRFDHYFLESSLYA--TGRVEATVGKLVAAGKTFE---------- 288

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                 D   L  R+T  GDD DR + KSDGSYTYF  D+AY   K+ERG+  +I + GS
Sbjct: 289 ------DGGALWLRTTDYGDDKDRVMKKSDGSYTYFVPDVAYHVNKWERGYHKVINIQGS 342

Query: 359 DHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           DH G + R+ A   A  V       + +L ++V + R G  +K+SKRAG ++TLR ++D 
Sbjct: 343 DHHGTIARVRAGLQAADVGIPAGYPDYVLHKMVTVMRGGEEVKISKRAGSYVTLRDLIDW 402

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            G D+VRF ++ RK      FD     +++ ENPV+YVQYA+AR  S+  Q ++      
Sbjct: 403 TGKDAVRFFLISRKADTEFVFDVDLALKKNDENPVYYVQYAHARICSVIVQWREQQAG-- 460

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D               +E  L++ LA YP ++  A  +  P+ +AFYL DLA  FH ++
Sbjct: 461 -DPATLAQADLARLVAPTEAALMLKLAAYPVMLSGAAESLAPHDVAFYLRDLAGAFHSYY 519

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  R       +      L           A ++ +GL ++GV +P+ M
Sbjct: 520 AAERFLTDDPALSRARLALLAA-------TAQVLRNGLAVLGVSAPDRM 561


>gi|239813480|ref|YP_002942390.1| arginyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239800057|gb|ACS17124.1| arginyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 561

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 184/602 (30%), Positives = 296/602 (49%), Gaps = 58/602 (9%)

Query: 1   MYLFAD-FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L      + L N L+ +            +   E P+  AHG  ++ AAM L++PLG 
Sbjct: 1   MLLVKQELLAALANTLESLSPGAG------SKAAFESPKVAAHGDFASTAAMQLAKPLGR 54

Query: 60  DPLTIAELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            P  +AE + A +   P     V+++ +AG GF+N+ L  +  ++I+  ++ +G  +G+ 
Sbjct: 55  KPRELAEELSAALLATPVFGQWVEAIEVAGPGFLNIRLKTAAKQQIVREVLAAGSAFGQQ 114

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
               G KV +EFVSANPTGP+HVGH R A +GD + +L A  G  V RE+Y NDAG QI 
Sbjct: 115 PAT-GEKVLVEFVSANPTGPLHVGHGRQAALGDAICNLRASQGDTVWREFYYNDAGVQIQ 173

Query: 176 TLALSVFWRYQQALYNNDSDLPEG----YYPGVYLKHVGKELADK-----YSSELLNFPE 226
           TLA S   R +      D + P G     Y G Y+  + ++   K        E      
Sbjct: 174 TLAHSTQLRAR-GFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSDDREYTASGN 232

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
              L  +++++V  + +    DL+A  ++ D +  E   +      + + +  L   G  
Sbjct: 233 IDDLDSIREFAVAYLRREQDLDLQAFRVRFDNYYLESSLYT--SGRVEEAVRKLVAAGKT 290

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           YE                    L  +ST  GDD DR + K DG+YTYF  D+AY   K+E
Sbjct: 291 YE----------------QDGALWLKSTDYGDDKDRVMKKQDGTYTYFVPDVAYHIAKWE 334

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           RGF  ++ + G+DH G + R+ A   A  V   +   + +L  +VR+ + G  +K+SKRA
Sbjct: 335 RGFHKVVNIQGTDHHGTIARVRAGLQAAGVGIPEGYPDYVLHTMVRVMKGGEEVKISKRA 394

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G ++TLR +++   +D+VRF +L RK      FD      ++ +NPV+YVQYA+AR  S+
Sbjct: 395 GSYVTLRDLIEWTSTDAVRFFLLSRKPDTEYTFDVDLAVAKNNDNPVYYVQYAHARICSV 454

Query: 465 FR-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                 D     D DL P      ++             A+YP ++  A     P+ + F
Sbjct: 455 LAGWGGDATALKDVDLSPLESPAAQALMLLL--------AKYPAMLTAAAKDFAPHDVTF 506

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL +LA+ +H ++   R       +  ++  + + RL LV A A ++++GL I+GV +P+
Sbjct: 507 YLRELAASYHSYYDAER-------ILVDDEPVKLARLALVAATAQVLHNGLAILGVSAPS 559

Query: 584 EM 585
           +M
Sbjct: 560 KM 561


>gi|217969154|ref|YP_002354388.1| arginyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506481|gb|ACK53492.1| arginyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 587

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 206/622 (33%), Positives = 317/622 (50%), Gaps = 74/622 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + AD    L + L+     +  +      I++ERP+  +HG  +TN A+ L++PL  +P 
Sbjct: 1   MSADPKVLLTDLLQTALKSVAPDLAATP-ILLERPKQASHGDFATNLALQLAKPLKRNPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A L++A +     V    +AG GFIN  L+      ++  ++  G ++GR   GKG K
Sbjct: 60  ELAGLLLAELPPSKLVARAEVAGAGFINFTLASDAKTAVVREVLARGADFGR-GAGKGIK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G +L+ ++AF+GYEV+REYY+NDAG Q++ LALS +
Sbjct: 119 VQVEFVSANPTGPLHVGHGRGAAYGASLSDVLAFAGYEVSREYYVNDAGRQMDILALSTW 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------------------------- 217
            RY  A +  +   P   Y G Y+  +G+E+ D +                         
Sbjct: 179 LRYL-AFFGIEIPFPPNAYQGDYVVDMGREMRDAHQDRFAKVTAMQILAGTPGLPPSDRK 237

Query: 218 SSELLNFPEE--------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
             E     EE              +  P V  +++   +   R+DL+   ++ D + SE 
Sbjct: 238 DDEAKQQREEHLDALIANAKKLLGEDYPWVHGFALNEQLGDGREDLQEFGVRFDKWFSEQ 297

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                D   +   +  L + GY+Y                +      FRST  GD+ DR 
Sbjct: 298 SLF--DTGLVERAVTQLEKAGYIY----------------LQDGAKWFRSTAFGDEKDRV 339

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           + + +G +TYFA+D+AY   KYERGFD MI + G+DH GY+ R++   AA+    A+++V
Sbjct: 340 VQRENGLFTYFASDIAYHLNKYERGFDRMIDIWGADHHGYIPRVKGAIAALGLDPARLDV 399

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            L +   LYRDG    MS R+G+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K
Sbjct: 400 ALVQFAVLYRDGQKTSMSTRSGEFVTLRELRREVGNDACRFFYVLRKSDQHLDFDLDLAK 459

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            QS ENPV+YVQYA+AR  S+  Q      +L                +  EL L   LA
Sbjct: 460 SQSNENPVYYVQYAHARVCSVLDQWGGEAAEL-------AGADLGLLQNERELALCARLA 512

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +  ++++A     P+++AFYL DLA+ FH  ++  R       +   +  L + RL L 
Sbjct: 513 SFAELVQDAAAGYAPHQIAFYLKDLAADFHSWYNAER-------MLVEDEALKLARLALA 565

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++ +GL ++GV +P  M
Sbjct: 566 AAVRQVLVTGLKMLGVSAPESM 587


>gi|580993|emb|CAA38537.1| argS [Corynebacterium glutamicum]
          Length = 517

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 180/552 (32%), Positives = 288/552 (52%), Gaps = 35/552 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +ERPR+  HG  +TN A+ +++ +G +P  +A  +   +  D  +DS  IAG GF+N+ L
Sbjct: 1   MERPRNPEHGDYATNIALQVAKKVGQNPRDLATWLAEALAADDAIDSAEIAGPGFLNIRL 60

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + +   +I++ I+  G  +G +       VN+EFVSANPTGP+H+G  R A VGD+L  +
Sbjct: 61  AAAAQGEIVAKILAQGETFGNSDHLSHLDVNLEFVSANPTGPIHLGGTRWAAVGDSLGRV 120

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           +  SG +VTREYY ND G QI+  ALS+    +          PE  Y G Y+K + + +
Sbjct: 121 LEASGAKVTREYYFNDHGRQIDRFALSLLAAAK------GEPTPEDGYGGEYIKEIAEAI 174

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K+  E L         + +   V+ M + I+  L       D++  E+     +   +
Sbjct: 175 VEKH-PEALALEPAATQELFRAEGVEMMFEHIKSSLHEFGTDFDVYYHENSLF--ESGAV 231

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              +  L   G +YE                       RST  GDD DR ++KSDG   Y
Sbjct: 232 DKAVQVLKDNGNLYEN----------------EGAWWLRSTEFGDDKDRVVIKSDGDAAY 275

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            A D+AY   K+ RG +  IY++G+DH GY+ RL+A AAA+  K   + VL+ ++V L R
Sbjct: 276 IAGDIAYVADKFSRGHNLNIYMLGADHHGYIARLKAAAAALGYKPEGVEVLIGQMVNLLR 335

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG  ++MSKRAG  +TL  +V+ +G D+ R+ ++       LD D    + QS +NPV+Y
Sbjct: 336 DGKAVRMSKRAGTVVTLDDLVEAIGIDAARYSLIRSSVDSSLDIDLGLWESQSSDNPVYY 395

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY +AR  SI R+A+ +   +  +    +++  + E D     LI  L E+P V++ A 
Sbjct: 396 VQYGHARLCSIARKAETLG--VTEEGADLSLLTHDREGD-----LIRTLGEFPAVVKAAA 448

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             +EP+++A Y  +LA  FH  +      P+   V  +   +   RL L  A    + + 
Sbjct: 449 DLREPHRIARYAEELAGTFHRFYDSCHILPK---VDEDTAPIHTARLALAAATRQTLANA 505

Query: 574 LNIIGVESPNEM 585
           L+++GV +P +M
Sbjct: 506 LHLVGVSAPEKM 517


>gi|146329599|ref|YP_001209938.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166232783|sp|A5EXU4|SYR_DICNV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146233069|gb|ABQ14047.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 592

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 187/617 (30%), Positives = 311/617 (50%), Gaps = 65/617 (10%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           +    L + L  +     ++ ++LD+ I IER +D  +G  ++N A+  ++   + P  +
Sbjct: 4   EIQDGLGSALILVAKNHGIDIRLLDQAIEIERCKDPENGDFASNIALKYAKVFKMKPRQL 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+ +V  + +   V  + +AG GFIN+ LS   +  +L ++V     YG        K+ 
Sbjct: 64  ADELVVSVPLMDSVAGMEVAGPGFINIRLSRESITAVLENVVAKKERYGCFENPNARKIL 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+HVGH R A  GD+L+ L+  +G++V REYYIND G Q++ LALSV+WR
Sbjct: 124 VEFVSANPTGPLHVGHGRGAAYGDSLSRLLIANGHQVDREYYINDFGRQMDILALSVYWR 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------------------NF 224
           Y Q        LP+G Y G Y+  + K+L +K    L                     N 
Sbjct: 184 YVQEC-GIGVALPKGIYQGDYVIDIAKKLKEKEGKRLAYPVNEWAPDYPQTWTQEQVDNG 242

Query: 225 PEEKWLP----------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
             ++W+                  V D ++   +  IR DL+   +  D + SE      
Sbjct: 243 DRDRWIDGAIAGLKEKLGQKEYRGVFDLALSMELDDIRGDLEEFGVFFDRWFSERSMSEN 302

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D   I + +  +   GY+YE                    + F+ST  GD+ DR + + +
Sbjct: 303 DM--INNALKKVDEAGYLYE----------------KDGAVWFKSTAFGDEKDRVVRRKN 344

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G  TYF++D++Y   KY RG+D MI ++G+DH GY+ R+ A  AA+     ++ + L + 
Sbjct: 345 GMTTYFSSDISYHFDKYNRGYDQMIDILGADHHGYMARVRASLAALGLDPEKLVIALVQF 404

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             LY+ G  ++MS R+G+F+TLR + + VG+D+ RF  + RK  + LDFD    +  SK+
Sbjct: 405 AVLYKGGEKMQMSTRSGEFVTLRDLREHVGADAARFFYVMRKPEQHLDFDLDLAESNSKD 464

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NP +YV+YA+ARC  +  +A++   +   +     +  + +  +  E  LI  L  YP V
Sbjct: 465 NPFYYVEYAHARCCGMLNKAEEEGYEFSPE---AALKCRNALVEPEETALISELHRYPEV 521

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A     P+++  YL +LA+ +H ++  G +      V   + ++   RL L  AV  
Sbjct: 522 VIAAGKQMAPHQVIIYLKELATRWHHYYDVGHK------VLHEDEEIRNARLLLTWAVRQ 575

Query: 569 IINSGLNIIGVESPNEM 585
           ++ + L IIGV++   M
Sbjct: 576 VLRNALAIIGVQARERM 592


>gi|189183882|ref|YP_001937667.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692015|sp|B3CST6|SYR_ORITI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189180653|dbj|BAG40433.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 590

 Score =  498 bits (1283), Expect = e-138,   Method: Composition-based stats.
 Identities = 243/594 (40%), Positives = 360/594 (60%), Gaps = 13/594 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV--EKKILDR------IVIERPRDCAHGHLSTNAAMI 52
           M ++      +      I  K+K   + K  D       IV+E  +D     +STN AM+
Sbjct: 1   MNIYKRLKQDIDVVATSIINKLKSTSDSKKFDSLNDTIPIVLESSKDVNSYDISTNIAML 60

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           +++ +  + +T+A L   ++   P + ++ IAG GFIN  +        L+ I+      
Sbjct: 61  IAKKMNQNSITLANLFKKKLSHYPYIANITIAGPGFINFVILQEAWTNYLAIILDGSYRK 120

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
             + IG   KVNIE+VSANPTGP+H+GH R AV GD LA+L+  +GY+VTREYY+ND G 
Sbjct: 121 EYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLATLLQCTGYQVTREYYVNDTGV 180

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           QI+ L+ SV+ RY+QA+    +D+P+G YPG YL  VG  LA++Y  +LL   E ++L I
Sbjct: 181 QIDNLSKSVYLRYKQAITGQAADIPKGLYPGEYLISVGTNLAEEYGDKLLTLSEPEYLNI 240

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +KD +V  +++ I+ DL  + ++HD+F SE   H  D + I  +ID L+ +  VY G L 
Sbjct: 241 IKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSNVISKVIDLLSVKKLVYTGKLS 298

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            PK +++      R QLLF+ST+ GDD DRPL K DGS++YFA+D+AY   K +RGFD +
Sbjct: 299 QPKGQSSDNW-QPRSQLLFKSTIFGDDQDRPLQKEDGSWSYFASDIAYADNKIKRGFDYV 357

Query: 353 IYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I+++G+DH GYV R++A+  A+ S +   +++ +C+LV+L  DG+ +KMSKR+G F T+R
Sbjct: 358 IFILGADHIGYVSRIKAIIQALDSNQDVTLDIKICQLVKLIEDGVAVKMSKRSGSFTTIR 417

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V + VG D +RF ML RKN+ +LDFD  K++EQS++NPVFYVQYAY R  SI R+AKD 
Sbjct: 418 DVYETVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNPVFYVQYAYVRAGSILRKAKD- 476

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             ++ +++F  N           EL LI  LA +  +++ A    EP+++A YL  LA+ 
Sbjct: 477 NANIAYEIFSTNKSDFSLLSTKEELNLIKILAVWSHMLDGAVKNFEPHRIAIYLQKLAAE 536

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  W+    +   RF+  N+  LT  RL L  AV  II  GL IIG+     M
Sbjct: 537 FHALWNLKSRDLDYRFIVLNDNNLTAARLALATAVREIIREGLKIIGITCVEVM 590


>gi|239917325|ref|YP_002956883.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414195|ref|ZP_06245937.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511651|sp|C5CA60|SYR_MICLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|239838532|gb|ACS30329.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 556

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 193/588 (32%), Positives = 307/588 (52%), Gaps = 44/588 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKI-----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           D S+ L   L +      +   +       R+ +ERPR   HG  +TN A+ L +  G+ 
Sbjct: 5   DLSALLSAVLTDAVDAGDLPAALREGITPARVKVERPRSREHGDWATNVALQLGKKAGMA 64

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A L+  R+   P + +V +AG GF+N+ L  +    +   IV +G EYGRN    G
Sbjct: 65  PRDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDTLAG 124

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             VN+EFVSANPTGP+H+GH R A +GD +A L+  SG +VT EYY+NDAG Q+N  A S
Sbjct: 125 HTVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADS 184

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V  R          D+P G YPG Y++ +   +A ++   +    +E   P+V++ + + 
Sbjct: 185 VLARLH------GRDVPAGGYPGAYVQELADAVALEHPD-VRELTDEAARPVVREAAYRL 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            M+ I+D L A ++  D+F SE   H  D   I   +  L  QG++              
Sbjct: 238 QMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIDQAVQRLREQGHI-------------- 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +     +  ++T  GDD DR L++++G  TYFAAD AY+  K +RGF+  +Y++G+DH
Sbjct: 282 --EDREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLGADH 339

Query: 361 SGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            GYV RL+A+AAA  +  A  I +L+ +L+ +       K+SKRAG+ I L+ +V+ +G 
Sbjct: 340 HGYVNRLKAIAAAAGDDPATNIEILIGQLISV----NGAKLSKRAGNIIELKDLVEWLGR 395

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D++R+ +        L  D   ++  + +NPV+YVQYA+AR     R A+    D     
Sbjct: 396 DALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD----- 450

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R+          +E +L+  LAE+P V+  A   +EP+++  +L  +A  +H  ++  
Sbjct: 451 --RSEFDAALLTHATESELLAQLAEFPAVVAAAARLREPHRVTRHLEVIAGAYHSWYAAC 508

Query: 540 RENPRLRFVQANN--RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R  P             L   RL L  A A ++ +GL ++GV +P +M
Sbjct: 509 RIVPMPTDDGTPRPVETLNRTRLWLNDATAQVLANGLGLLGVSAPEKM 556


>gi|296454953|ref|YP_003662097.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184386|gb|ADH01268.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 684

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 174/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 71  SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 130

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 131 RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDTDKHLNKV 190

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 191 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 250

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 251 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 310

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 311 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 370

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 371 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 412

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 413 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 472

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 473 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 532

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 533 ASHTNDNPVYYVQYAHARSKNVDRNAAVAG--ISYEGADLALLDTEADG-----EVLAAL 585

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 586 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 645

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 646 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 684


>gi|160871916|ref|ZP_02062048.1| arginyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120715|gb|EDP46053.1| arginyl-tRNA synthetase [Rickettsiella grylli]
          Length = 587

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 202/615 (32%), Positives = 297/615 (48%), Gaps = 68/615 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +K  L  I     +   I   I I+  R   HG  S+N A++L++ L + PL +AE
Sbjct: 5   LKQEIKKALLSIGDSFTLSSSI---IQIDYARGKLHGDFSSNIALVLAKQLNVQPLQLAE 61

Query: 67  LIVARIK---IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            I A I     +  ++ + +AG GFIN +L       ++S I+    ++G + +G+   V
Sbjct: 62  KIKANIDCCSENSKIEKIEVAGPGFINFFLKKWVWHDVISQILTQTNQFGTSNLGRQESV 121

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEFVSANPTGP+HVGH R A  GD++  L++  GY+V  EYYINDAG Q++ LA SV+ 
Sbjct: 122 LIEFVSANPTGPLHVGHGRGAAYGDSITRLLSAVGYQVCSEYYINDAGRQMDILATSVWL 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----------------- 226
           RY + + N   + P   Y G Y++ + ++L  +Y        E                 
Sbjct: 182 RYLE-ICNETFNFPSNAYRGNYVQKIAQQLYTQYGERFFQPSELVFKDIPVDEPQGGNKE 240

Query: 227 ---------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                                V D  + +++  I++DL A  +  D + SE    +    
Sbjct: 241 HHIDSLILQAKTLLGPNGYEKVFDAGLNSILIDIKEDLTAFRVNFDEWFSEKSLFKM--G 298

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   I  L   G  YE                    L F+ST  GDD DR LL+ +G  
Sbjct: 299 FVNKAIKRLKELGKTYEA----------------NGALWFKSTDFGDDKDRVLLRENGQP 342

Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           TYFAAD  Y     E R F  +I V+G+DH GY+ R+ AV  A    K     LL +   
Sbjct: 343 TYFAADAGYRLYILEKRKFKKIINVLGADHHGYIPRIHAVIQAFGFPKESFKALLVQFAI 402

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           LYR    I+MS R+G+FITLR + +EVG+D+ RF  + R+  + +DFD    KEQS  NP
Sbjct: 403 LYRGDKKIQMSTRSGEFITLRDLREEVGADATRFFYVLRRVDQHMDFDLELAKEQSNANP 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQY YAR  S+ RQ        +  L   ++       +T E  L+V L  Y  V+E
Sbjct: 463 VYYVQYVYARINSVMRQLAAKQWVWNKILGMDSL---SELKETQEQNLLVLLNRYSEVVE 519

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  EP+ LA +L DLA  FH +++              N  L   RL L+ A+A +I
Sbjct: 520 LAAVTYEPHILAHFLKDLAQSFHVYYNSF-------IFLVENDNLRNARLNLIAAIAQVI 572

Query: 571 NSGLNIIGVESPNEM 585
            +GL+++GV++   M
Sbjct: 573 KNGLDLLGVKTLEVM 587


>gi|194337845|ref|YP_002019639.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229470726|sp|B4SH34|SYR_PELPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194310322|gb|ACF45022.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 552

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 180/584 (30%), Positives = 291/584 (49%), Gaps = 37/584 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
                +  +        +      +I+IE+P D   G  STN A++ ++    +P  +A+
Sbjct: 1   MKEFFRPVISNALHSAGITTD--KQIIIEQPADKKFGDFSTNIALLAAKECRRNPRELAQ 58

Query: 67  LIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I+  +   PD +  + +AG GFIN YL+P ++ + +  +++ G EYG+   GKG K  +
Sbjct: 59  TIIEHLSFPPDTIAKIEVAGAGFINFYLTPLFIMQSVEQVLLDGDEYGKGESGKGEKAIV 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+ +G  R  V+GD +A+L A  GY VTREYY NDAG Q+  L  SV +RY
Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLFATQGYAVTREYYFNDAGRQMQILGESVRFRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +       + P  +Y G Y+  + +EL + + + L +  +   + I K  + + +   I
Sbjct: 179 LERC-GETIEFPATHYQGEYIGEIAEELFNDHGTALADSTD---VQIFKKRAEEIIFASI 234

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI---RDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           R  L+ L I+HD F +E   +  D   +   + +ID L  + ++ E              
Sbjct: 235 RKTLERLGIRHDSFFNEHTLYTPDAGGVTGNQRVIDALREKEFIAEY------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                   F +T +G + D+ L+KS G  +Y   D+AY   KYERGF  ++ V G+DH  
Sbjct: 282 ---DGATWFLTTKLGQEKDKVLIKSSGEPSYRLPDIAYHITKYERGFGMIVNVFGADHID 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               +      +      I + + + V    DG  +KMS R G+   L  ++D+VG+D+ 
Sbjct: 339 EYPDVLEALKILGYDTRHIKIAINQFVTTTVDGQTLKMSTRKGNADLLDDLIDDVGADAT 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R   + R     L+FD    K+QSK+NPVFY+QYA+AR  S+ R A+    ++ FD    
Sbjct: 399 RLFFIMRSKDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLLRMAQ---QEIGFDATSS 455

Query: 483 -NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             +   +     +ELQL   L +YP +I+ +    EP K+  YL+ LA  FH  +   +E
Sbjct: 456 PELHLLQRLTSPAELQLGSALLDYPDMIKTSLRLLEPQKMVEYLHSLAECFHRFY---QE 512

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P L+        +   RL L  A   ++ +G  I+GV +P  M
Sbjct: 513 CPILK----AEPDIARARLFLSVATRQVLRNGFRILGVSAPESM 552


>gi|21672856|ref|NP_660921.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222754|sp|Q8KGF3|SYR_CHLTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21645905|gb|AAM71263.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 551

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 177/575 (30%), Positives = 288/575 (50%), Gaps = 36/575 (6%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74
           +++   K  +E      I I++P D   G  STN A ++++    +P  +A  ++  +  
Sbjct: 9   IQDALQKAGIETD--KEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDF 66

Query: 75  -DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
            +  V    +AG GFIN +L+P++  +    ++  G  +G N  GKG K  +E+VSANPT
Sbjct: 67  PEGTVTKTEVAGPGFINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPT 126

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
           GP+ +G  R  V+GD +A+L+   GYEVTREYY NDAG Q+  LA SV +RY +      
Sbjct: 127 GPLTIGRGRGGVLGDCIANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQV 185

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            + PE +Y G Y+  + + L  ++   L    E   L I K+ +   +   IR  L+ L 
Sbjct: 186 IEFPETHYQGDYIGEIAETLFIEHGDGLAATDE---LTIFKEAAEAVIFSSIRKTLERLL 242

Query: 254 IQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           I HD F +E   +    G PS  + +ID L  +G++                        
Sbjct: 243 ITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFI----------------GNYDGATW 286

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F +T +G + D+ L+KS G  +Y   D+AY   K+ERGFD M+ V G+DH      +   
Sbjct: 287 FMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEA 346

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              +    +++ + + + V     G  +KMS R G+   L  ++D+VG+D+ R   + R 
Sbjct: 347 LKILGYDTSKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRLFFIMRG 406

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               L+FD    K+QSK+NPVFY+QYA+AR  S+ R A+    ++ FD            
Sbjct: 407 KDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRMAE---KEVGFDEATAIGAGLPLL 463

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E+ L   L ++P +I+++    EP K+  YL+ +A  +H  +   +E P L+    
Sbjct: 464 SSEPEIDLASALLDFPDIIQSSLRQLEPQKMVEYLHTVAERYHKFY---QECPILK---- 516

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  L   RL+L  AV  ++ +G  I+G+ +P  M
Sbjct: 517 ADEHLRTARLELSLAVRQVLRNGFKILGISAPESM 551


>gi|189347953|ref|YP_001944482.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|229558752|sp|B3EIJ1|SYR_CHLL2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189342100|gb|ACD91503.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 551

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 183/583 (31%), Positives = 290/583 (49%), Gaps = 36/583 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA- 65
               L   +K       +E      + IE+P D  +G  STN A++LS+    +P  +A 
Sbjct: 1   MQEFLLPVIKSALQSAAIETDKP--VQIEKPTDKKNGDFSTNIALLLSKECRRNPRELAA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ELI   I  D  V+ + IAG GFIN YL+P ++ + +  I++ G  YG +  GKG    +
Sbjct: 59  ELIGQMIFPDGTVERIEIAGPGFINFYLTPLFIMQSVEHILLEGKGYGSSCAGKGKTAIV 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+ +G  R  V+GD +A+L+A  GY +TREYY NDAG Q+  L  SV +RY
Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLLATQGYGLTREYYFNDAGRQMQILGESVRYRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +     D   PE +Y G Y++ + + L  ++ S L++      L I KD +   +   I
Sbjct: 179 MERC-GRDIVFPESHYQGEYIREIAEILFLEHESSLIDSD---NLSIFKDTAEAIIFSSI 234

Query: 246 RDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  L  ++I+HD F +E   +  +    S    +++ L  +G++                
Sbjct: 235 KKTLARIDIRHDSFFNEHTLYIAEGNGKSANDRVLELLESKGFI---------------- 278

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D       F +T +G + D+ L+KS G  +Y   D+AY   KY R FD ++ V G+DH  
Sbjct: 279 DRYDGATWFLTTKLGQEKDKVLVKSSGEPSYRLPDIAYHLDKYRRKFDLIVNVFGADHID 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               +      +    +++ V + + V    DG  +KMS R G+   L  ++D+VG+D+ 
Sbjct: 339 EYPDVLEALRILGHDTSKMRVAINQFVTTTVDGETVKMSTRKGNADLLDELIDDVGADAT 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R   + R     L+FD    K+QSK+NPVFY+QYA+AR  S+ R A +   +  F     
Sbjct: 399 RLFFIMRSKDSHLNFDIELAKKQSKDNPVFYLQYAHARICSLLRIAAE---EAGFKPDGS 455

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                +      E+QL   L +YP VI  A    EP K+  YL+ +A  +H  +   +E 
Sbjct: 456 GAHLLQKLTLEPEIQLGFTLLDYPEVIRTAIRLLEPQKMVEYLHSVAEQYHKFY---QEC 512

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P L+     +  +   RL L  A   ++ +G  I+G+ +P  M
Sbjct: 513 PILK----ADPDIRTARLFLSLATRQVLRNGFTILGISAPESM 551


>gi|254455816|ref|ZP_05069245.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082818|gb|EDZ60244.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 576

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 216/588 (36%), Positives = 359/588 (61%), Gaps = 15/588 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  +  ++K+ + E++ K ++   +  + I  E P       +STN AM+LS+    
Sbjct: 1   MNIFELYLDKIKSIIIELNKKGELLIPESFNGINAEIPPPKFDCDISTNVAMVLSKLNKK 60

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P+ +AE I   IK  DP ++++ +   GFIN+   P +    +  I+ +   YG N   
Sbjct: 61  SPIDLAEQISPIIKNKDPLIENINVVKPGFINIKFKPFFWSNFIQQIITNSSTYGVNEKE 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K     +EFVSANPTGP+HVGHCR A++GD +++++ F+ ++VT+EYY+ND G QI    
Sbjct: 121 KKLNYLVEFVSANPTGPLHVGHCRGAILGDVISNVLIFNKHKVTKEYYVNDYGNQIINFT 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV++R ++  +N      E  YPG YL    K +    S    +  ++    +      
Sbjct: 181 RSVYFRIRELKFNETFPNNEDLYPGDYLIDFAKNIVSSNSDINFDNYDDISEKLTTLSIE 240

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           QA++ +I+ +LK+L I HD F+SE +    +   + ++I  L    +VY+G +  P  + 
Sbjct: 241 QALL-LIKKNLKSLGINHDNFVSEKNIVVNNE--VEEVIKFLEASKFVYKGKIKAPAGED 297

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            Q   ++R+QLLF+ST  GDD DR L KSDGS+TYFA+D+AY K K +R FD +I ++G+
Sbjct: 298 DQNW-VEREQLLFKSTDFGDDKDRALQKSDGSWTYFASDVAYHKNKVDRNFDYLINILGA 356

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH+GY+KR+ +   A+S  K ++   + +LV+L +D  P KMSKR GD+IT+  ++ EVG
Sbjct: 357 DHAGYIKRISSSVEALSGTKGKLICKVSQLVKLIKDKKPFKMSKRKGDYITVDDLITEVG 416

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDF 477
            D+ RF+ML R +   LDFDF  VKE+SK+NP++YVQY YAR  S+FR   KD+  ++D 
Sbjct: 417 KDATRFIMLNRSSDVELDFDFDAVKEKSKDNPLYYVQYCYARISSVFRHLNKDLNSNIDI 476

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D +         E+   E++++  ++E+P+ IE A+   EP+++  YLY+LAS FH +W+
Sbjct: 477 DDYSF-------EYSYDEIKILKKVSEWPKCIEAASNKLEPHRIPIYLYELASEFHSYWN 529

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            G++ P  RF+  + ++++  +L  + A++++I SG++I+GV++P++M
Sbjct: 530 LGKQQPEKRFIN-DQKEISPDKLVFLKAISNVIKSGMSIVGVDTPDKM 576


>gi|56477479|ref|YP_159068.1| arginyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81357403|sp|Q5P3E7|SYR_AZOSE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56313522|emb|CAI08167.1| Arginyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 587

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 203/622 (32%), Positives = 305/622 (49%), Gaps = 74/622 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + AD   +L   L+     I  E      I +ERP+   HG  +TN A+ L++PL   P 
Sbjct: 1   MSADSKVQLTALLRAALKSIAPELADTP-IHLERPKQAGHGDFATNLALQLAKPLRRRPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AEL++A +     V +  +AG GFIN  L+       + +++  G E+GR     GT 
Sbjct: 60  ELAELLLAELPRSTLVAATEVAGAGFINFTLAAGAKTAAVGTVLERGAEFGR-GARNGTS 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EFVSANPTGP+HVGH R A  G +LA+++ F+G +VTREYYINDAG Q++ LALS +
Sbjct: 119 VQLEFVSANPTGPLHVGHGRGAAYGASLAAVLDFAGSDVTREYYINDAGRQMDILALSTW 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP----------- 231
            RY  ALY  D   P   Y G Y+  + + + + +      F  E+ L            
Sbjct: 179 LRYL-ALYGLDIPFPPNAYQGDYVVDMARAMREGHQDRFAGFTIEQVLEGAPGLPVAERK 237

Query: 232 ----------------------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                                        V  +++   +   RDDL+   +  D + SE 
Sbjct: 238 DDEAKTQREDHLDMLIANAKRLLGEDYHFVHGFALNEQLGDGRDDLEEFGVHFDKWFSEK 297

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                D   +   +  L ++G+VY                +      FRST  GD+ DR 
Sbjct: 298 SLF--DTGLVDRAVAELEKRGHVY----------------LQDGAKWFRSTAFGDEKDRV 339

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           + + +G YTYFA+D+AY   KYERG+D +I + G+DH GY+ R++   AA+     ++ V
Sbjct: 340 VQRENGLYTYFASDIAYHLNKYERGYDRIIDIWGADHHGYIPRVKGAIAALGLPPEKLEV 399

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            L +   LYR+G    MS R+G+F+TLR +  EVG+D+ RF  + RK+ + LDFD    K
Sbjct: 400 ALVQFAVLYRNGQKASMSTRSGEFVTLRELRREVGNDACRFFYVLRKSDQHLDFDLDLAK 459

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            QS ENPV+YVQYA+AR  S+  Q      +L            +   +  EL L   L 
Sbjct: 460 SQSNENPVYYVQYAHARVCSVLEQWGGEAAEL-------RAAQLDLLGNERELALCARLG 512

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +P +I+NA     P+++AFYL DLA+ FH  ++  R       ++     L        
Sbjct: 513 GFPELIQNAAADHAPHQIAFYLKDLAAEFHSWYNAERMLVDDPALRLARLALAT------ 566

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++ + L ++GV +P  M
Sbjct: 567 -AVRQVLATALALLGVSAPQSM 587


>gi|310286780|ref|YP_003938038.1| arginyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|311063676|ref|YP_003970401.1| arginyl-tRNA synthetase ArgS [Bifidobacterium bifidum PRL2010]
 gi|309250716|gb|ADO52464.1| arginyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|310865995|gb|ADP35364.1| ArgS Arginyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 598

 Score =  495 bits (1274), Expect = e-137,   Method: Composition-based stats.
 Identities = 174/623 (27%), Positives = 307/623 (49%), Gaps = 73/623 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++    + + L        +   ++    +  + RP+D AHG  ++NAAM L++  G+ P
Sbjct: 7   SELIETIAHDLVAAGKAGTLTDDLIPETAKFAVMRPKDRAHGDWASNAAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AEL   R+     + +V +AG GFIN+ L  +    ++  ++  G  YG+N    G 
Sbjct: 67  RDLAELFAERLTAADGISTVEVAGPGFINITLDSASAAAVVDKVLADGAGYGKNAHLGGK 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S+
Sbjct: 127 TLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKSL 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------------------ 223
                        + P   Y G Y+  +   +  +  ++ ++                  
Sbjct: 187 VAAAH------GEETPIDGYKGKYINEIADRVIAEAEADGVDVLSLPRVDGGLDKDGNPL 240

Query: 224 -FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              + +     +  +V  M   I+  +K   ++ D++  E++ ++     +   I+ L  
Sbjct: 241 GEGDSEQREEFRKRAVPMMFDEIQRSMKEFRVRFDVWFHENNLYK--DGEVDRAIEELRS 298

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G ++E                      F ST  GDD DR ++KS+G + YFAAD+AY+ 
Sbjct: 299 RGDIFE----------------KDGATWFESTKHGDDKDRVIIKSNGDFAYFAADIAYYW 342

Query: 343 CKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPI 398
            K  R     D  IY++G+DH GY+ R+ A+ AA  ++    + +L+ +LV + ++G P+
Sbjct: 343 NKRHRAVDPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGVNMQILIGQLVNVMKNGKPV 402

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +MSKRAG+ +T+  +V+ VG D+ R+ +     +  +D D   +   S ENPV+YVQYA+
Sbjct: 403 RMSKRAGNVVTIDDLVEAVGVDAARYSLARTDYNTSVDIDLDLLTSHSNENPVYYVQYAH 462

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  ++ R A      +  +    +++  E++      +++  LA++P  +  A   + P
Sbjct: 463 ARSCNVDRNAAAAG--IGTEGADLSLLDTEADG-----EVLAALAQWPATLALAGDQRAP 515

Query: 519 YKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQL 562
           +K+A YL DLA  +H  ++  R  P                 LR  +         RL+L
Sbjct: 516 HKVAHYLEDLAGAYHKWYNVERVVPMALTDPEERLDDAAREALRIAKNPEPARAAARLKL 575

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV ++I SGL+++GV +P++M
Sbjct: 576 NDAVRTVIASGLDLLGVTAPDKM 598


>gi|312797448|ref|YP_004030370.1| Arginyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169223|emb|CBW76226.1| Arginyl-tRNA synthetase (EC 6.1.1.19) [Burkholderia rhizoxinica HKI
           454]
          Length = 617

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 196/621 (31%), Positives = 302/621 (48%), Gaps = 69/621 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             S L + +  +            +   I ++RP+  AHG +++N AM L++PL  +P  
Sbjct: 24  IESILADAVAGVVQASPAASDAAFVQPTIALDRPKIAAHGDVASNLAMQLAKPLRANPRV 83

Query: 64  IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG- 118
           +A+ +       P     + S  +AG GF+NL L+ +  ++ + +I+     +G    G 
Sbjct: 84  LAQQLAEATLAHPRAAGLIASAEVAGPGFLNLRLTDAAKQQTVHAILAQRERFGFAPPGR 143

Query: 119 --KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
              G +V IEFVSANPTGP+HVGH R A +GD L +LM   G+ V RE+Y NDAG QINT
Sbjct: 144 GGHGKQVLIEFVSANPTGPLHVGHGRQAALGDALGALMQTQGWAVHREFYYNDAGVQINT 203

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWL 230
           LALSV  R +      D+  PE  Y G Y+  + ++              +    +   L
Sbjct: 204 LALSVQARAR-GFKPGDAQWPEAAYNGDYIADIARDYLAGETVSASDGVPVTGAGDVDNL 262

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++ ++V  + +    DLKA  ++ D +  E   +  D   +   +  L   G  YE  
Sbjct: 263 DAIRRFAVTYLRREQDIDLKAFGVKFDQYYLESSLY--DEGRVERAVQALVAAGKTYE-- 318

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                         D   L  R+T  GDD DR + K DG+YTYF  D+AY   K+ERGF 
Sbjct: 319 --------------DDGALWLRTTDYGDDKDRVMRKQDGTYTYFVPDIAYHVTKWERGFT 364

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            +I V GSDH G + R+ A   A+         + +L ++V + RDG  IK+SKRAG ++
Sbjct: 365 KVINVQGSDHHGTIARVRAGLQALDIGIPSGYPDYVLHKMVTVMRDGREIKISKRAGSYV 424

Query: 409 TLRHVV--------DEV----------------GSDSVRFMMLWRKNSELLDFDFCKVKE 444
           T+R ++        DE                 G D+VRF ++ RK      FD     +
Sbjct: 425 TVRDLIVWSGGGNSDESAASLSPQQLDSDMLRKGRDAVRFFLISRKADTEFTFDIDLALK 484

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q+ ENPV+YVQYA+AR  S+  + +  + D   D    ++ P  +E       L+  LAE
Sbjct: 485 QNDENPVYYVQYAHARICSVLSELRARYTDGLEDWSQVDLTPLATE---RSKALLQKLAE 541

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP+++E+A     P+ +AFYL DLA  FH  ++   E      V  ++ +  + R  L+ 
Sbjct: 542 YPQMLEHAANELAPHAVAFYLRDLAGEFHSFYNDRAER-----VLVDDARERLARAALLA 596

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   ++ +GL  IGV +P +M
Sbjct: 597 ATRQVLANGLATIGVSAPEKM 617


>gi|319791172|ref|YP_004152812.1| arginyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315593635|gb|ADU34701.1| arginyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 561

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 185/602 (30%), Positives = 298/602 (49%), Gaps = 58/602 (9%)

Query: 1   MYLFAD-FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L      + L N L+ +            +   E P+  AHG  ++ AAM L++PL  
Sbjct: 1   MLLVKQELLAALANTLESLSPGAGA------KAAFESPKVAAHGDFASTAAMQLAKPLAK 54

Query: 60  DPLTIAELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            P  +AE + A +   P     V+++ IAG GF+N+ L  +  ++I+  ++ +G  +G+ 
Sbjct: 55  KPRELAEQLSAALLATPAFGQWVEAIEIAGPGFLNIRLKTAAKQQIVREVLAAGNTFGQQ 114

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
               G KV +EFVSANPTGP+HVGH R A +GD + +L A  G  V RE+Y NDAG QI 
Sbjct: 115 PAT-GEKVLVEFVSANPTGPLHVGHGRQAALGDAICNLRASQGDSVWREFYYNDAGVQIQ 173

Query: 176 TLALSVFWRYQQALYNNDSDLPEG----YYPGVYLKHVGKELADK-----YSSELLNFPE 226
           TLA S   R +      D + P G     Y G Y+  + ++   K        E     +
Sbjct: 174 TLANSTQLRAR-GFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSDDREYTASGD 232

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
              +  +++++V  + +    DL+A  ++ D +  E   +      +   +  L   G  
Sbjct: 233 IDDIDSIREFAVAYLRREQDLDLQAFRVRFDNYYLESSLYT--SGRVEAAVGKLVAAGKT 290

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           YE                +   L  +ST  GDD DR + K DG+YTYF  D+AY   K+E
Sbjct: 291 YE----------------EDGALWLKSTDYGDDKDRVMKKKDGTYTYFVPDVAYHIAKWE 334

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRA 404
           RGF  ++ + G+DH G + R+ A   A  E   +   + +L  +VR+ + G  +K+SKRA
Sbjct: 335 RGFHKVVNIQGTDHHGTIARVRAGLQAAGEGIPEGYPDYVLHTMVRVMKGGEEVKISKRA 394

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G ++TLR +++   +D+VRF +L RK      FD      ++ +NPV+YVQYA+AR  S+
Sbjct: 395 GSYVTLRDLIEWTSTDAVRFFLLSRKPDTEYTFDVDLAVTKNNDNPVYYVQYAHARICSV 454

Query: 465 FR-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                 D     D DL P      ++             A+YP ++  A+    P+ + F
Sbjct: 455 LAGWGGDAATLKDVDLSPLKSPAAQALMLLL--------AKYPAMLTAASKDFAPHDVTF 506

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL +LA+ +H ++   R       +  ++ K+ + RL LV A A ++++GL I+GV +PN
Sbjct: 507 YLRELAASYHSYYDAER-------ILVDDEKVKLARLALVAATAQVLHNGLAILGVSAPN 559

Query: 584 EM 585
           +M
Sbjct: 560 KM 561


>gi|148284332|ref|YP_001248422.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166232817|sp|A5CD00|SYR_ORITB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146739771|emb|CAM79637.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 590

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 241/594 (40%), Positives = 359/594 (60%), Gaps = 13/594 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV--EKKILDR------IVIERPRDCAHGHLSTNAAMI 52
           M ++      +      I  K+K   + K  D       IV+E  +D     +STN AM+
Sbjct: 1   MNIYKRLKQDIDVVATSIINKLKSTSDSKEFDSLNDTIPIVLESSKDVNSYDISTNIAML 60

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           +++ +  + +T+A L   ++   P +D++ IAG GFIN  +        L+ I+      
Sbjct: 61  IAKKMNQNSITLANLFKKKLSHYPYIDNITIAGPGFINFVILQEEWTNYLAIILDGSYRK 120

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
             + IG   KVNIE+VSANPTGP+H+GH R AV GD LA+L+  +GY+VTREYY+ND G 
Sbjct: 121 EYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLAALLQCTGYQVTREYYVNDTGV 180

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           QI+ LA SV+ RY+Q +    +D+P+G YPG YL  VG +LA +Y  +LL   E ++L I
Sbjct: 181 QIDNLAKSVYLRYKQVITGQVADIPKGLYPGEYLISVGTKLAKEYGDKLLTLSEPEYLNI 240

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +KD +V  +++ I+ DL  + ++HD+F SE   H  D + I  +ID L+ +  VY G L 
Sbjct: 241 IKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSNVISKVIDLLSVKKLVYTGELS 298

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            PK +++      R QLLF+ST+ GD+ DRPL K DGS++YFA+D+AY   K +RGFD +
Sbjct: 299 QPKGQSSDNW-QPRSQLLFKSTIFGDNQDRPLQKEDGSWSYFASDIAYADNKIKRGFDYV 357

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I+++G+DH GYV R++A+  A+   +   +++ +C+LV+L  +G+ +KMSKR+G F T+R
Sbjct: 358 IFILGADHIGYVSRIKAIIQALDFNQDITLDIKICQLVKLIENGVAVKMSKRSGSFTTIR 417

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V + VG D +RF ML RKN+ +LDFD  K++EQS++NPVFYVQYAY R  SI R+AKD 
Sbjct: 418 DVYEIVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNPVFYVQYAYVRAGSILRKAKD- 476

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             ++ +++F  N           EL LI  LA +  +++ A    EP+++A YL  LA+ 
Sbjct: 477 NANIAYEIFSTNKSDFSLLSTKEELNLIKILAVWSHMLDGAVKNFEPHRIAIYLQKLAAE 536

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH  W+    +   RF+  N+  LT  RL L  AV  II  GL IIG+     M
Sbjct: 537 FHALWNLKSNDLDYRFIVLNDNNLTAARLALATAVREIIREGLKIIGITCVEVM 590


>gi|322691947|ref|YP_004221517.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456803|dbj|BAJ67425.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 620

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 175/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAMTDTDKHLNKV 126

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 187 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 307 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAVAG--ISYEGADLALLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P VI  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVIATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|213693168|ref|YP_002323754.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254782943|sp|B7GNM0|SYR_BIFLI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|213524629|gb|ACJ53376.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 620

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 175/639 (27%), Positives = 312/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +   ++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISSIAHNLVAAGQAGTLTDDLIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDTDKHLNKV 126

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    D+    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 187 HGEQINRFAKSLVAAWAEANNLGDAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 307 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAVAG--ISYEGADLALLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMVLTDPETRGDDEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|313139480|ref|ZP_07801673.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313131990|gb|EFR49607.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 613

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 173/623 (27%), Positives = 306/623 (49%), Gaps = 73/623 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++    + + L        +   ++    +  + RP+D A G  ++NAAM L++  G+ P
Sbjct: 22  SELIETIAHDLVAAGKAGTLTDDLIPETAKFAVMRPKDRARGDWASNAAMQLAKKAGMKP 81

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AEL   R+     + +V +AG GFIN+ L  +    ++  ++  G  YG+N    G 
Sbjct: 82  RDLAELFAERLTAADGISTVEVAGPGFINITLDSASAAAVVDKVLADGAGYGKNAHLGGK 141

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S+
Sbjct: 142 TLNLEFVSANPTGPIHIGGTRWASVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKSL 201

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------------------ 223
                        + P   Y G Y+  +   +  +  ++ ++                  
Sbjct: 202 VAAAH------GEETPIDGYKGKYINEIADRVIAEAEADGVDVLSLPRVDGGLDKDGNPL 255

Query: 224 -FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              + +     +  +V  M   I+  +K   ++ D++  E++ ++     +   I+ L  
Sbjct: 256 GEGDSEQREEFRKRAVPMMFDEIQRSMKEFRVRFDVWFHENNLYK--DGEVDRAIEELRS 313

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G ++E                      F ST  GDD DR ++KS+G + YFAAD+AY+ 
Sbjct: 314 RGDIFE----------------KDGATWFESTKHGDDKDRVIIKSNGDFAYFAADIAYYW 357

Query: 343 CKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPI 398
            K  R     D  IY++G+DH GY+ R+ A+ AA  ++    + +L+ +LV + ++G P+
Sbjct: 358 NKRHRAVDPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGVNMQILIGQLVNVMKNGKPV 417

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +MSKRAG+ +T+  +V+ VG D+ R+ +     +  +D D   +   S ENPV+YVQYA+
Sbjct: 418 RMSKRAGNVVTIDDLVEAVGVDAARYSLARTDYNTSVDIDLDLLTSHSNENPVYYVQYAH 477

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  ++ R A      +  +    +++  E++      +++  LA++P  +  A   + P
Sbjct: 478 ARSCNVDRNAAAAG--IGTEGADLSLLDTEADG-----EVLAALAQWPATLALAGDQRAP 530

Query: 519 YKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQL 562
           +K+A YL DLA  +H  ++  R  P                 LR  +         RL+L
Sbjct: 531 HKVAHYLEDLAGAYHKWYNVERVVPMALTDPEERLDDAAREALRIAKNPEPARAAARLKL 590

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV ++I SGL+++GV +P++M
Sbjct: 591 NDAVRTVIASGLDLLGVTAPDKM 613


>gi|91763297|ref|ZP_01265261.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717710|gb|EAS84361.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 577

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 220/589 (37%), Positives = 360/589 (61%), Gaps = 16/589 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  +  ++   +K+++    +E  + L+ I ++ P       +STN AM+LS+    
Sbjct: 1   MNIFDLYLDKIIILIKKLNKDGTLELPESLNGINVDIPPSNFDCDISTNVAMVLSKANKK 60

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P+ IA +++  IK  D  ++S+ +A  GFIN+     Y    + SI  +  +YG N   
Sbjct: 61  SPIDIANILIELIKNEDEKIESISVAKPGFINIKFKTIYWNNFIKSINQNHKDYGVNNKE 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  K  IEFVSANPTGP+HVGHCR A++GD +++++ F+ ++V++EYY+ND G QI    
Sbjct: 121 KKQKYLIEFVSANPTGPLHVGHCRGAILGDVISNILIFNKHDVSKEYYVNDYGNQIINFT 180

Query: 179 LSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-PIVKDY 236
            SVF+R ++ L+N    +     YPG YL  + K +    S+++L F + + +   +   
Sbjct: 181 KSVFFRIREILFNEKFPIENSDLYPGDYLVGIAKNIIK--SNKVLKFDKFENVSKELTLL 238

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           SV   +K+I+++L  L I HD F SE D    +   ++  ID L  +  VY G +  PK 
Sbjct: 239 SVSESLKLIKNNLSNLGIVHDRFTSETDIVLNNE--VQKAIDKLKEKKLVYSGKIKAPKG 296

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   ++R+QLLF+ST  GDD DR L KSD S+TYFA+D+AY   K  R +D +I ++
Sbjct: 297 ENDENW-VEREQLLFKSTDFGDDKDRALQKSDKSWTYFASDVAYHDNKLNRNYDTLINIL 355

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GY+KR+ +V  A+S  K ++   + +LV+L +DG P KMSKR GD+IT+  ++ E
Sbjct: 356 GADHAGYIKRITSVVEALSGDKKKLICKVSQLVKLIKDGKPFKMSKRKGDYITVEDLIAE 415

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ RF+ML R +   LDFDF KVKE+SK+NP++YVQY YAR  S+FR       +  
Sbjct: 416 VGKDATRFIMLNRSSDVELDFDFTKVKEKSKDNPLYYVQYCYARISSVFRHVNLNIEN-- 473

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 N+   E E+   E++++  +AE+P+ IE A++  EP+++  YLY+L+S FH +W
Sbjct: 474 ----DLNIKDYEFEYTGDEIKILKKIAEWPKCIEAASLRLEPHRIPVYLYELSSEFHSYW 529

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G+++   RF+    +K++  +L  +  ++++I SG+NI+GV++P +M
Sbjct: 530 NMGKDDQSKRFINEQ-KKISNDKLVFLKVISNVIKSGMNIVGVDTPQKM 577


>gi|320459349|dbj|BAJ69970.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 640

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 175/639 (27%), Positives = 312/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +   ++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 27  SELISSIAHNLVAAGQAGTLTDDLIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 86

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 87  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDTDKHLNKV 146

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 147 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 206

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    D+    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 207 HGEQINRFAKSLVAAWAEANNLGDAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 266

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 267 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 326

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 327 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 368

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 369 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 428

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 429 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 488

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 489 ASHTNDNPVYYVQYAHARSKNVDRNAAVAG--ISYEGADLALLDTEADG-----EVLAAL 541

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 542 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMVLTDPETRGDDEARKALE 601

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 602 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 640


>gi|317482968|ref|ZP_07941972.1| arginyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915575|gb|EFV36993.1| arginyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 620

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 174/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDADKHLNKV 126

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNDHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 187 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 307 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAAAG--ISYEGADLALLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|239620904|ref|ZP_04663935.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133789|ref|YP_004001128.1| args [Bifidobacterium longum subsp. longum BBMN68]
 gi|322690014|ref|YP_004209748.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|239516165|gb|EEQ56032.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516548|emb|CBK70164.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
 gi|311773072|gb|ADQ02560.1| ArgS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320461350|dbj|BAJ71970.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 620

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 174/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDADKHLNKV 126

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNDHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 187 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 307 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENSADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAAAG--ISYEGADLALLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|23336003|ref|ZP_00121233.1| COG0018: Arginyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189440467|ref|YP_001955548.1| arginyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|238692032|sp|B3DPJ1|SYR_BIFLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189428902|gb|ACD99050.1| Arginyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 620

 Score =  492 bits (1266), Expect = e-136,   Method: Composition-based stats.
 Identities = 174/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAMTDTDKHLNKV 126

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 187 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 307 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAVAG--ISYEGADLALLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|227546999|ref|ZP_03977048.1| arginine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227212531|gb|EEI80420.1| arginine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 640

 Score =  492 bits (1266), Expect = e-136,   Method: Composition-based stats.
 Identities = 174/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 27  SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 86

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +G            
Sbjct: 87  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAMTDTDKHLNKV 146

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 147 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 206

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 207 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 266

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 267 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 326

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 327 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 368

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 369 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 428

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 429 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 488

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 489 ASHTNDNPVYYVQYAHARSKNVDRNAAAAG--ISYEGADLALLDTEADG-----EVLAAL 541

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 542 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 601

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 602 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 640


>gi|193214239|ref|YP_001995438.1| arginyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087716|gb|ACF12991.1| arginyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 552

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 183/582 (31%), Positives = 293/582 (50%), Gaps = 33/582 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   L+    ++ VE      I IE+P D   G  STN AM L+R L  +P  IA 
Sbjct: 1   MRDILVEALRMALSELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAA 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I++ + +   VD + +AG GFIN Y S  Y+   +  I+  G ++GR+ +GKG    +E
Sbjct: 61  DIISNLSLGESVDKIDVAGAGFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVE 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+ VG  R  V+GD +A+++   GY+VTREYY N+AG Q+  LA SV +RY 
Sbjct: 121 YVSANPTGPLTVGRGRGGVLGDCIANMLEAQGYDVTREYYFNNAGRQMRILAGSVRFRYL 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           + L     D PE +Y G Y+  + +++ D+      +   E+ L   K+++   + + I+
Sbjct: 181 E-LCGEQVDFPEDHYQGGYIGDIAQKIYDEKG---TSLAGEEDLSFFKEFAEAEIFESIK 236

Query: 247 DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + L  L I+HD F +E+  +       S   ++++ LA +GY+                 
Sbjct: 237 NTLGRLGIKHDSFFNENTLYEKGENGKSRNDEVVERLAEKGYIKH--------------- 281

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            +     F +T  G + D+ L+KS G  +Y   D+AY   K+ER F  M+ V G+DH   
Sbjct: 282 -EDGATWFLTTKFGLEKDKVLVKSTGEPSYRLPDIAYHITKFERDFSLMVNVFGADHIDE 340

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +      +  +K ++ V + + V    +G  +KMS R G+   L  ++D+VG+D+ R
Sbjct: 341 YPDVLRALEVLGYEKERVQVAINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATR 400

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  + R     L+FD    K+QS +NPVFY+QYA+AR  S+ R A +   + DF+     
Sbjct: 401 FFFIIRNKESHLNFDVDLAKKQSTDNPVFYLQYAHARICSLIRVAGE---ETDFEPSASE 457

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               ++     ELQL   L EY   +E    A EP KL  Y+  +A  FH  +   R   
Sbjct: 458 YDLLDALTANEELQLAKILLEYGTALEVCVNALEPQKLIGYMNRVAEAFHKFYQECR--- 514

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + +    +   RL L  A   ++ +G  ++G+ +P +M
Sbjct: 515 ----IVSEEESVRKSRLYLCLATRQVLQNGFKVLGISAPEKM 552


>gi|332524260|ref|ZP_08400484.1| arginyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332107593|gb|EGJ08817.1| arginyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 566

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 187/563 (33%), Positives = 277/563 (49%), Gaps = 46/563 (8%)

Query: 35  ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS----VFIAGKGFIN 90
           E P+  AHG L+  AAM L+R L  +P  + + +V  +   P  +     + IAG GFIN
Sbjct: 30  ESPKQAAHGDLAITAAMGLARTLKKNPREVGQQLVELLGRQPAFERWVQALEIAGPGFIN 89

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L P+  + +++ ++  G  +GR   G G K+ +EFVSANPTGP+HVGH R A +GD++
Sbjct: 90  LRLKPAARQAVVAEVLQGGEAFGRKPAGAG-KLMVEFVSANPTGPLHVGHGRQAALGDSI 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L    G++VTRE+Y NDAG QI  LA S   R  + L   D   PE  Y G Y+  + 
Sbjct: 149 CRLFESQGWDVTREFYYNDAGVQIQNLATSTRCR-LKGLKPGDDGWPESAYNGDYIADIA 207

Query: 211 KELADK-----YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
            + A K              +   +  ++ ++V  +      DL+A  ++ D +  E   
Sbjct: 208 ADFAAKKTVHADDRAFTASGDADDVDGIRQFAVAYLRHEQDLDLQAFGVRFDNYYLESSL 267

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + D +  L   G  +E                D   L  RST  GDD DR + 
Sbjct: 268 YA--DGRVEDTVRRLVAAGKTFE----------------DGGALWLRSTDYGDDKDRVMR 309

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINV 383
           KSDGSYTYF  D+AY   K+ERGF  +I V GSDH G + R+ A   A  V       + 
Sbjct: 310 KSDGSYTYFVPDVAYHIAKFERGFTKVINVQGSDHHGTIARVRAGLQAAGVGIPAGYPDY 369

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +L ++V + + G  +K+SKRAG ++TLR ++D    D+VR+ ++ RK      FD     
Sbjct: 370 VLHKMVTVMKGGQEVKISKRAGSYVTLRDLIDWTSRDAVRYFLISRKADTEFVFDIDLAL 429

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           + + ENPVFYVQYA+AR  S+  Q +        DL              SE  L++ LA
Sbjct: 430 KANDENPVFYVQYAHARICSVLAQYQGETDFAGADLS--------RLTAPSEYALMLQLA 481

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            YP ++E A     P+ +AFYL DLA+ FH +++  R       +      L        
Sbjct: 482 AYPGMLERAAAEHAPHDVAFYLRDLAAAFHSYYAAERFLVDDPALARARMALLAA----- 536

Query: 564 HAVASIINSGLNIIGVESPNEMS 586
              A ++ + L ++GV +P  MS
Sbjct: 537 --TAQVLRNALGMLGVSAPTSMS 557


>gi|291457069|ref|ZP_06596459.1| arginine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291380904|gb|EFE88422.1| arginine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 620

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 174/639 (27%), Positives = 312/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L       ++  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISNIAHNLVAAGQAGQLTDELIPPIDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110
             +AE   A +     +  V +AG GFIN+ L  +    ++ +++ +             
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAAPAVDGDKHLNKV 126

Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A         ++ P   Y G Y+  +   +  +  ++ +N  
Sbjct: 187 HGEQINRFAKSLVAAWAEANKLGGAGYQTETPCDGYKGAYINEIAARVEAEAKADGVNLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEDDTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L   G +Y+                      F ST  GDD DR ++K
Sbjct: 307 A--DKKVEAAIEELKSHGDIYD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++    +++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAAAG--ISYEGADLSLLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDNEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|224282334|ref|ZP_03645656.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 598

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 173/623 (27%), Positives = 306/623 (49%), Gaps = 73/623 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++    + + L        +   ++    +  + RP+D A G  ++NAAM L++  G+ P
Sbjct: 7   SELIETIAHDLVAAGKAGTLTDDLIPETAKFAVMRPKDRARGDWASNAAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AEL   R+     + +V +AG GFIN+ L  +    ++  ++  G  YG+N    G 
Sbjct: 67  RDLAELFAERLTAADGISTVEVAGPGFINITLDSASAAAVVDKVLADGAGYGKNAHLGGK 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S+
Sbjct: 127 TLNLEFVSANPTGPIHIGGTRWASVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKSL 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------------------ 223
                        + P   Y G Y+  +   +  +  ++ ++                  
Sbjct: 187 VAAAH------GEETPIDGYKGKYINEIADRVIAEAEADGVDVLSLPRVDGGLDKDGNPL 240

Query: 224 -FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              + +     +  +V  M   I+  +K   ++ D++  E++ ++     +   I+ L  
Sbjct: 241 GEGDSEQREEFRKRAVPMMFDEIQRSMKEFRVRFDVWFHENNLYK--DGEVDRAIEELRS 298

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G ++E                      F ST  GDD DR ++KS+G + YFAAD+AY+ 
Sbjct: 299 RGDIFE----------------KDGATWFESTKHGDDKDRVIIKSNGDFAYFAADIAYYW 342

Query: 343 CKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPI 398
            K  R     D  IY++G+DH GY+ R+ A+ AA  ++    + +L+ +LV + ++G P+
Sbjct: 343 NKRHRAVDPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGVNMQILIGQLVNVMKNGKPV 402

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +MSKRAG+ +T+  +V+ VG D+ R+ +     +  +D D   +   S ENPV+YVQYA+
Sbjct: 403 RMSKRAGNVVTIDDLVEAVGVDAARYSLARTDYNTSVDIDLDLLTSHSNENPVYYVQYAH 462

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  ++ R A      +  +    +++  E++      +++  LA++P  +  A   + P
Sbjct: 463 ARSCNVDRNAAAAG--IGTEGADLSLLDTEADG-----EVLAALAQWPATLALAGDQRAP 515

Query: 519 YKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQL 562
           +K+A YL DLA  +H  ++  R  P                 LR  +         RL+L
Sbjct: 516 HKVAHYLEDLAGAYHKWYNVERVVPMALTDPEERLDDAAREALRIAKNPEPARAAARLKL 575

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV ++I SGL+++GV +P++M
Sbjct: 576 NDAVRTVIASGLDLLGVTAPDKM 598


>gi|307297805|ref|ZP_07577611.1| arginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917065|gb|EFN47447.1| arginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 543

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 190/579 (32%), Positives = 291/579 (50%), Gaps = 37/579 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F  +L+N +K++  +  +    +D   +E P +   G LSTNAA ILSR L   P  IA 
Sbjct: 2   FKEKLENSIKKVLEEFDIYDDKID-FKVEIPPE-GFGDLSTNAAFILSRILKKSPREIAN 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +I  R+  + D   V +AG GFIN+  S +YL  +L+ ++ +   + R      T++  E
Sbjct: 60  IICDRLGNEADYSRVEVAGPGFINVDFSITYLSSVLAELIDAPDFWKRK---GDTRIQFE 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F SANPTGP  VGH R AV GD L  + +  GY V RE YINDAG QI  L  S++ RY 
Sbjct: 117 FASANPTGPFTVGHGRQAVFGDVLCRVFSCRGYGVHREMYINDAGRQIGLLGRSLWVRYN 176

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q L   + +LPE  Y G YL  + + LA +           +     K Y++  M++ I 
Sbjct: 177 QYL-GVEEELPEDGYQGEYLIDIARGLAGEIGERFKAVWNSEAEAFFKKYALDKMLEDIM 235

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             LK L ++ D    E      D   +  +I  L R+  +YE                  
Sbjct: 236 GTLKRLRVEFDNVFFESSL--IDDGTVDSVIGMLERKELIYES----------------E 277

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
                + +   +D D+ L++S+GSYTYF  D+AY   K++RGF  +  + G+DH G++ R
Sbjct: 278 GARWLKVSNFVEDDDKVLVRSNGSYTYFMTDIAYHYNKHDRGFKKVFDIWGADHMGHIPR 337

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   A+  +   +NV++ + V L R+G  +KMS R G+F TL  +V+ VG DS R+  
Sbjct: 338 MNAAMKALGIEDGFLNVIVHQYVNLKREGEVVKMSTRRGEFTTLDELVEAVGVDSTRYFF 397

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                   + FD    +++S +NPVFYVQYA AR  ++FR AK+       D        
Sbjct: 398 AMFDPDTHMLFDIDLARQRSNDNPVFYVQYANARISNVFRTAKEKNVKRSRDSL------ 451

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E      + ++I  L  +P ++++        +L  YL DL+  FHG+++         
Sbjct: 452 -ELLDSQEDRRIIKLLTIFPEILDSVVADYRTNRLTSYLEDLSRAFHGYYNKN------I 504

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N  L+  RL L  A+ +I+ SGL ++GVE+P+ M
Sbjct: 505 IVDPENPALSGARLALCEAIQNILRSGLELLGVEAPDSM 543


>gi|189485731|ref|YP_001956672.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287690|dbj|BAG14211.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 552

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 196/593 (33%), Positives = 300/593 (50%), Gaps = 56/593 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
              ++K+ LK I  K    K I  R+   +E P        + NAAM++++ + ++P T+
Sbjct: 2   IRQKIKDSLKVIIAKYLQGKGITGRLNFTLEIPPRNIDADFAFNAAMLIAKKVKINPRTV 61

Query: 65  AELIVA--RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           A+ ++     +I   ++   IAG GFINL +    L K L +I+    +YG        K
Sbjct: 62  AQELIDITVKEIPELIEKAEIAGAGFINLRIKNEILYKELETILREKDKYGSFPENNKEK 121

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EFVSANPTGP+H+GH R A +GD++  ++   GY+V +EYY+ND G Q+  L+ SV 
Sbjct: 122 ILVEFVSANPTGPLHIGHGRGAAIGDSIVRILKHLGYDVIKEYYLNDYGNQMLVLSKSVE 181

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R++Q L     D P  +Y G Y+  + K L  +                 K  SV+ ++
Sbjct: 182 IRFRQ-LKGEKIDFPADHYQGSYIIDIAKRLISENRDIDEVN--------FKYESVKEIL 232

Query: 243 KIIRDDLKALNIQHDIFISE----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             I+DDLK   ++ D + SE     D  +   + +    + L  +G  Y           
Sbjct: 233 SWIKDDLKDFAVEFDDWFSETKITADKDKNGKTEVDKTCEYLLAKGNAY----------- 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                +    L   ST  GDD DR L +SDG YTY A+D A+ K K+ERGF  +  + G+
Sbjct: 282 -----VKGDALWLASTKFGDDKDRVLKRSDGRYTYLASDAAHHKNKFERGFTKLANLWGA 336

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYV R++A    +   K  ++++L + V L R+G+ + MS R G+FITL+ V DEVG
Sbjct: 337 DHHGYVARIKACVQMLGFDKEALDIILYQFVSLVRNGLSVTMSTRTGEFITLKEVADEVG 396

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD------IF 472
            D+ RF  L R     ++FD    K+QS +NPVFYVQY  ARC SI R++K+        
Sbjct: 397 KDACRFFFLMRAPDSQIEFDLELAKKQSSKNPVFYVQYVNARCSSIIRESKNRSGITSEI 456

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            +++F L               E  LI  LA +   +  +     P+    YL +LA +F
Sbjct: 457 KNINFSLLNTK----------EERDLIKQLAAFCDTLALSEKTMSPHHFTVYLIELADIF 506

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  + + R       V   +  LT  RL+L+  VA II +GLN++GV  P++M
Sbjct: 507 HKFYENYR-------VLTGDANLTSARLKLIEGVAIIIKNGLNLLGVSVPDKM 552


>gi|294786695|ref|ZP_06751949.1| arginine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226309|ref|ZP_07868097.1| arginyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|294485528|gb|EFG33162.1| arginine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120441|gb|EFT83573.1| arginyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 606

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 177/627 (28%), Positives = 297/627 (47%), Gaps = 73/627 (11%)

Query: 1   MY--LFADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSR 55
           M   + A   SR  + L       ++  +++   D+I + RP+D +HG  +TN AM L +
Sbjct: 11  MNPEVLAQLISRTAHDLVASGQAGQLANEMIPAEDKIAVMRPKDRSHGDWATNIAMQLGK 70

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
             G+ P  +A+     ++ DP + SV +AG GFIN+ L+ +   +I+  I+     +G N
Sbjct: 71  KAGMAPRDLAQKFAQALQADPGIASVEVAGPGFINITLNAASASQIVDQILDQKAAFGTN 130

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
               G  +N+EFVSANPTGP+H+G  R A +GD LA ++  +G  V REYY ND G QIN
Sbjct: 131 DHLAGKTLNLEFVSANPTGPIHIGGTRWAAIGDALARILQANGAHVIREYYFNDHGEQIN 190

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------------ 223
             A S+             + P   Y G Y+  + +++ D+  +E ++            
Sbjct: 191 RFAKSLVAAAH------GEEAPADGYKGAYIDEIAQKVIDQAKAESIDVLSLPRVDGGKD 244

Query: 224 -------FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                    + +     +  +V  M   I+  +    +  D++  E+  +  +   +   
Sbjct: 245 ADGQPLGEGDSEQREEFRKRAVPMMFDEIKQSMADFRVNFDVYFHENSVY--EDGEVDAA 302

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L   G +Y                       F+ST  GDD DR ++KS+G   Y   
Sbjct: 303 FQRLKDLGDIYR----------------KDGATWFKSTKYGDDKDRVIIKSNGEAAYIMG 346

Query: 337 DLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLY 392
           D+AY+  K  R     D  IY++G+DH GYV RL+AV AA  ++    + +L+ +LV + 
Sbjct: 347 DIAYYWNKRHRKQDPADIAIYMLGADHHGYVNRLQAVCAAFGDEPNYNMQILIGQLVNVV 406

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           + G P++MSKRAG+ +T+  +V  VG D+ R+ +     ++ +D D   + + S ENPV+
Sbjct: 407 KGGQPVRMSKRAGNVVTIDDLVGVVGVDATRYSLERTSYTQNIDIDLDLLSQHSNENPVY 466

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +++ R A      +            +SE       ++  LA YP V+ +A
Sbjct: 467 YVQYAHARSKNVDRNAAAAGLTVGGADLSLLDTEADSE-------ILAQLALYPSVVASA 519

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENP--------------RLRFVQANNRKLTMM 558
               EP++LA YL DLA  +H  ++  R  P               ++  +         
Sbjct: 520 ADLNEPHRLAHYLEDLAGKYHQWYAAERVVPMELTEKEAQSADAQAIKVAKDPEPARAAA 579

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL+L  A A +  +GL ++ + +P++M
Sbjct: 580 RLKLNDAAAQVFENGLGLLAITAPDKM 606


>gi|71083662|ref|YP_266382.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|109895015|sp|Q4FM10|SYR_PELUB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71062775|gb|AAZ21778.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 577

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 218/589 (37%), Positives = 358/589 (60%), Gaps = 16/589 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +F  +  ++   +K+++    +E  + L+ + ++ P       +STN AM+LS+    
Sbjct: 1   MNIFDLYLDKIIILIKKLNKDGSLELPESLNGVNVDIPPSNFDCDISTNVAMVLSKANKK 60

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P+ IA +++  IK  D  ++S+  A  GFIN+     Y    + SI  +  +YG N   
Sbjct: 61  SPIDIANILIELIKNEDEKIESISAAKPGFINIKFKTIYWNNFIKSINQNHKDYGVNNKE 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  K  IEFVSANPTGP+HVGHCR A++GD +++++ F+ ++V++EYY+ND G QI    
Sbjct: 121 KKQKYLIEFVSANPTGPLHVGHCRGAILGDVISNILIFNKHDVSKEYYVNDYGNQILNFT 180

Query: 179 LSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-PIVKDY 236
            SVF+R ++ L+N    +     YPG YL  + K +    S+++L F + + +   +   
Sbjct: 181 KSVFFRIREILFNEKFPIENSDLYPGDYLVGIAKNIIK--SNKVLKFDKFENVSKELTLL 238

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           SV   +K+I+++L  L I HD F SE D    +   ++  ID L  +  VY G +  PK 
Sbjct: 239 SVSESLKLIKNNLSNLGIVHDRFTSETDIVLNNE--VQKAIDKLKEKKLVYSGKIKAPKG 296

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +   ++R+QLLF+ST  GDD DR L KSD S+TYFA+D+AY   K  R +D +I ++
Sbjct: 297 EDDENW-VEREQLLFKSTDFGDDKDRALQKSDKSWTYFASDVAYHDNKLNRNYDTLINIL 355

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH+GY+KR+ +V  A+S  K ++   + +LV+L +DG P KMSKR GD+IT+  ++ E
Sbjct: 356 GADHAGYIKRITSVVEALSGDKKKLICKVSQLVKLIKDGKPFKMSKRKGDYITVEDLIAE 415

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ RF+ML R +   LDFDF KVKE+SK+NP++YVQY YAR  S+FR       +  
Sbjct: 416 VGKDATRFIMLNRSSDVELDFDFTKVKEKSKDNPLYYVQYCYARISSVFRHVNLNIEN-- 473

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 N+   E  +   E++++  +AE+P+ IE A++  EP+++  YLY+L+S FH +W
Sbjct: 474 ----DLNIKDYEFAYTGDEIKILKKIAEWPKCIEAASLRLEPHRIPVYLYELSSEFHSYW 529

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G+E+   RF+    +K++  +L  +  ++++I SG++I+GV++P +M
Sbjct: 530 NMGKEDQSKRFINEQ-KKISNDKLVFLKVISNVIKSGMDIVGVDTPQKM 577


>gi|251772529|gb|EES53095.1| arginyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 589

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 204/605 (33%), Positives = 306/605 (50%), Gaps = 47/605 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR-----IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            S  +   ++    +    + +LDR     + +E P+    G LST  AM L++ +G  P
Sbjct: 6   VSEIVTRAIRMAGAQNSWPQDVLDRTLARGVRLEWPKKEEFGDLSTPMAMSLAKDMGKTP 65

Query: 62  LTIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             +A  I+  +    +       V IAG G++N + S  Y    L   +       R  I
Sbjct: 66  RHVAGTILESLRQIPETSSLFSKVDIAGPGYLNFFFSSPYFSDFLVQCLSGSALVDRVAI 125

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   +N+EFVSANPTGP+HVGH R A  GD+LA ++   G++V+ EYYINDAG Q+N L
Sbjct: 126 PKN--INVEFVSANPTGPLHVGHGRGAAFGDSLARILREVGHDVSTEYYINDAGNQMNML 183

Query: 178 ALSVFWRYQQALYNNDSDLPEG------YYPGVYLKHVGKELADK--------YSSELLN 223
             SV+  +++   +  S+           Y G Y+  + KE+ D             L  
Sbjct: 184 GKSVYLAFRKLTGHESSEEKVRLLGDTEGYRGDYIAGIAKEILDNPKGLPDALREDVLAG 243

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
              ++      D S + +M+ IR+DL    +  D + SE   H      +  I   L R 
Sbjct: 244 RFTDQVQSFFTDVSQRRIMEGIREDLDRFGVTFDRYFSEKTLHEKGADGLSSIARWLTR- 302

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                      + ++          L FR+T + DD DR L KSDGSYTYFAAD+AY   
Sbjct: 303 ----------LEKESDGAVYASDGALWFRTTAMADDKDRVLRKSDGSYTYFAADIAYHAD 352

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIKM 400
           K +RG+D M+ V G+DH GY  R++AVA  +S+   ++  + + L +LV L RDG  + M
Sbjct: 353 KVDRGYDIMVDVWGADHHGYQARMQAVAKVLSDRAKRQVDLKICLIQLVSLLRDGKAVSM 412

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           S RAG+F+TL  V+DEVG D+ RF  L R +   L+FD  K KE+S +NPV+YVQYA+AR
Sbjct: 413 STRAGEFVTLAEVLDEVGVDATRFSYLTRSHESALEFDLSKAKERSMDNPVYYVQYAHAR 472

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            +S+  QAK     +  D  P +  P E   + +   LI  +A++  V+  A  + E + 
Sbjct: 473 VKSLLAQAKSRGVTI-GDFHPEDFSPLE---EPAARSLIRLMAQFSGVLHRAAESFEVHP 528

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YL  LA  +H ++ H R        +  +R + M R+ L  AV  I+ SGL ++GV 
Sbjct: 529 LTDYLTALAGAYHHYYFHHRILSA----EDADRPVMMARIGLSMAVGRILASGLALLGVR 584

Query: 581 SPNEM 585
           +P+ M
Sbjct: 585 APDSM 589


>gi|289548074|ref|YP_003473062.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181691|gb|ADC88935.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 551

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 191/588 (32%), Positives = 302/588 (51%), Gaps = 44/588 (7%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           YLF      ++   K            ++   +E PR    G L+TN A ILS+ L  +P
Sbjct: 4   YLFQKIREIVRQEYKT----------EVEEFQVEPPRQEELGDLATNVAFILSKTLRRNP 53

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA+ +   +           A +GFIN+ +  S ++++   I+  G  +    +G+G 
Sbjct: 54  QEIAQYLANLLSQHGFDA---TAQRGFINIRILESTVKEMTKQILQEGESFFLEKVGEGK 110

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +E VSANPTGP+H+GH R AVVGD +A L+   G++VTREYYINDAG Q+  L LS+
Sbjct: 111 RILVELVSANPTGPLHLGHGRIAVVGDVIARLLTAFGFDVTREYYINDAGRQVYLLGLSI 170

Query: 182 FWRYQQALYNNDSD----LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            +R  +    +  D      E  Y G Y+  + KE    Y  EL     E+ +  +    
Sbjct: 171 LYRCLEMTGRDPEDIRPTFEEEGYKGTYVMDLAKEALQTYGEELFKGDREETIRTLSQLG 230

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++ +++ I   L  L++  D + SE      +   + +++  L  +GY+YE         
Sbjct: 231 IRKILEEISQTLSKLDVSIDSWFSERSLV--EEGRVEEVLSVLQEKGYLYE--------- 279

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      + F+ST+ GDD DR L KS G YTYFA D+AY   KY+RG+  ++ V G
Sbjct: 280 -------KDGAIWFKSTLFGDDKDRVLRKSTGEYTYFATDIAYHYEKYKRGYQQVVNVWG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ RL     A+      + V   ++VRL++    ++MSKRAG+F+TL  +++EV
Sbjct: 333 ADHHGYLPRLVGALRALGIPDQWLRVEWVQMVRLFKGEEEVRMSKRAGEFVTLEELMEEV 392

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D+VRF+ L R++   LDFD     E+S ENPVFYVQYA+AR R +FR+ K  +  +D 
Sbjct: 393 GKDAVRFIFLTRRSDTPLDFDIQLALEKSSENPVFYVQYAHARIRGVFREVKTRY-GIDP 451

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D        Q +  D + ++L          + +A     P+ +  +L + A  FH +++
Sbjct: 452 DNAGLGEHIQ-NLRDEAGVKLCKKCIFLKDTLWDAVSKLAPHIITSWLIETAKDFHNYYN 510

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H R       V   +R+L + RL ++  V   + + LN+IGV +P  M
Sbjct: 511 HHR-------VMVEDRELMLSRLAVLKTVEISLKTALNLIGVSAPERM 551


>gi|257438475|ref|ZP_05614230.1| arginine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199054|gb|EEU97338.1| arginine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 604

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 187/593 (31%), Positives = 295/593 (49%), Gaps = 35/593 (5%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
              K       + +  L   ++E P D  +G +++N AM  +R     P  IA+ ++A +
Sbjct: 27  EAAKAAMADGTLPEAELPAFIVEIPADTKNGDIASNLAMAGARTWRKAPKMIADALLAHL 86

Query: 73  K--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
                     V +AG GFINL+L+PS+   ++     +  EYGR   GKG K N+EFVSA
Sbjct: 87  PSIEHSVFAKVEVAGPGFINLFLAPSFWASVVLGACSNK-EYGRTDHGKGAKYNVEFVSA 145

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGPMH+G+ R   +GD LA+++ +SGY+VTRE+YINDAG QI     S+  RY Q   
Sbjct: 146 NPTGPMHMGNARGGALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFC 205

Query: 191 NNDS-DLPEGYYPGVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVK----DY 236
             ++  LP   Y G  +K +  E A    DKY +      EE     +    +K    DY
Sbjct: 206 GEETYPLPAECYQGGDIKVLAGEFAEINGDKYVAACSGLDEEALFASEAFETLKNALVDY 265

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++   +  ++ DL    I +D++  E   H  +   + D+++ L   G  Y+        
Sbjct: 266 ALPKNIAALKRDLGKYRIDYDVWFHESTLH--ESGAVLDVVNKLLELGACYKAEDGAIMY 323

Query: 297 KTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
           ++ Q        +  + T  G +    D  L++++G  TYFAAD+AY   K   RGF   
Sbjct: 324 RSAQYA-AKYGTVNKKKTEDGTEEEAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKA 382

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I V G+DH G+V R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  
Sbjct: 383 IDVWGADHHGHVARMKGAMDAIGLNGNDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTD 442

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++EV  DS RF+         +DFD  +  +   +NPV+YVQYA+AR  SI ++ +   
Sbjct: 443 LLEEVPIDSARFLFNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEG 502

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                       +      D SE+ LI  LA +P+ I  A    +P ++  ++ DLAS F
Sbjct: 503 ----VAFAGAEQVDATLLTDPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAF 558

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           H  + + R       +Q  +  +   RL L   V ++I + L +  +  P +M
Sbjct: 559 HRFYGNCR-------IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604


>gi|297569633|ref|YP_003690977.1| arginyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925548|gb|ADH86358.1| arginyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 555

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 183/556 (32%), Positives = 288/556 (51%), Gaps = 37/556 (6%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89
           +E P+    G  +TN AM+++      P  IAE +V  +    +       V +AG GF+
Sbjct: 33  VEEPKRAGQGDFATNLAMVVAGREKRKPREIAEALVGLLSDPANNGDLFARVEVAGPGFV 92

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N ++ P   + ++ +++  G +YGR   G+G  V +EFVSANPTGP+ VGH R AV+GD 
Sbjct: 93  NCFVKPEVWQGVVPAVLARGEDYGRGHSGEGRSVLVEFVSANPTGPLSVGHGRQAVLGDA 152

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A L+   GY VTREYY NDAG Q+  L  SV  RY + L     D PE  Y G Y++ +
Sbjct: 153 IARLLTAVGYRVTREYYYNDAGRQMRVLGESVQARYLELL-GRSGDFPEDGYQGEYIREI 211

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + L ++    L + P+   LP  K  + + +   I   L  L I+ D + +E   +  +
Sbjct: 212 AQALVNEQGEALKDAPDH--LPFTKK-AEEVIFADINATLARLGIKFDHYYNEHTLY--E 266

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + D++ +L  +G VY+                    + F++T  G + DR ++KS G
Sbjct: 267 QGLVDDVVASLRDKGLVYD----------------QDGAVWFKTTEFGLEQDRVIIKSSG 310

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY   D+AY + K  RG+D ++ V+GSDH   V  + A   A+     ++  ++ + V
Sbjct: 311 EPTYRLPDIAYHREKMRRGYDWLVNVLGSDHIATVPDVMAGLEALGYDSGKVTTVIHQFV 370

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L R+G  +KMS R   F+T+  ++D VG+D  RF  L RK    L+FD     ++ +EN
Sbjct: 371 TLMREGQQVKMSTRKATFVTVDELLDLVGADVARFFFLMRKADSQLEFDLDLATKEGQEN 430

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PV+YVQYA+AR  SI RQA++              I         EL L+  +A  P ++
Sbjct: 431 PVYYVQYAHARLCSIERQAREKGVVP----AAAEEIDFSRLEQAEELDLLQAMAGLPSLL 486

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E+A  A EP+++ FYL D+A+ FHG+++  R       +   +  L+  RL L  A+  +
Sbjct: 487 ESAAGALEPHRVVFYLQDMAAKFHGYYNRHR-------IVGEDLALSQARLALARALRVV 539

Query: 570 INSGLNIIGVESPNEM 585
             +GL +IGV +P  M
Sbjct: 540 FANGLQLIGVSAPESM 555


>gi|78188054|ref|YP_378392.1| arginyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|109894980|sp|Q3ANY2|SYR_CHLCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78170253|gb|ABB27349.1| arginyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 552

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 183/559 (32%), Positives = 290/559 (51%), Gaps = 35/559 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90
           I +E+P D   G  STN AM+ ++  G  P  +A+ I+  +   PD    + IAG GFIN
Sbjct: 24  IQLEQPADKKFGDFSTNIAMLAAKECGKKPRDLAQEIINHLAFPPDTVAKIEIAGAGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+P ++ + +  ++  G ++G++  G G K  +E+VSANPTGP+ +G  R  VVGD +
Sbjct: 84  FYLTPRFIMRSVEQVLRDGEKFGQSTEGNGKKAIVEYVSANPTGPLTIGRGRGGVVGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L+A  GYEVTREYY NDAG Q+  L  SV +RY + L  N  + PE +Y G Y++ + 
Sbjct: 144 ANLLATQGYEVTREYYFNDAGRQMQILGASVRFRYLE-LCGNTIEFPEDHYQGDYIRDIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH---R 267
             L +++ + L    E   L   K  + + + K I+  L+ LNI+HD F +E   +    
Sbjct: 203 ATLYEQHGNALEKSEE---LEPFKKAAEELIFKSIKATLERLNIRHDSFFNEHKLYLANN 259

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
             PS    +I +L+   ++                D       F +T +G + D+ L+KS
Sbjct: 260 NSPSANTAVIQSLSSSNFI----------------DDYDGATWFLTTKLGQEKDKVLIKS 303

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            G  +Y   D+AY   K++RGFD M+ V G+DH      +      +     +++V + +
Sbjct: 304 TGEPSYRLPDIAYHVNKFQRGFDLMVNVFGADHIDEYPDVLEALKILGYDTTKVHVAINQ 363

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    +G  +KMS R G+   L  ++ +VG+D+ R   + R     L+FD    K QSK
Sbjct: 364 FVTTTVNGQTVKMSTRKGNADLLDDLIADVGADATRLFFITRSKDSHLNFDVELAKRQSK 423

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYP 506
           ENPVFY+QYA+AR  S+ R AK    ++ FD             D  +E+QL   L  +P
Sbjct: 424 ENPVFYLQYAHARICSLLRLAK---QEVGFDADTYGFADVLQVLDGAAEVQLGFALLNFP 480

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +I+++    EP K+  YL+ LA  FH  +   +E+P L+       ++   RL L  A 
Sbjct: 481 AMIQSSLRLLEPQKMVEYLHALAEHFHRFY---QESPILK----AEPEVRTARLLLSVAT 533

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +G  I+G+ +P  M
Sbjct: 534 RQVLRNGFTILGISAPEAM 552


>gi|119026436|ref|YP_910281.1| arginyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|166232759|sp|A1A3B6|SYR_BIFAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118766020|dbj|BAF40199.1| arginyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 596

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 177/622 (28%), Positives = 301/622 (48%), Gaps = 74/622 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  + N    +  + K      D      +  + RP+D AHG  ++NAAM L++  G+ 
Sbjct: 6   LSELIFNIANTLVSEGKAGTLTADLIPPQAKFAVMRPKDRAHGDWASNAAMQLAKKAGMK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AEL  A +     + SV +AG GFIN+ L  +    ++ +++ +G +YG+N    G
Sbjct: 66  PRDLAELFAAELTNADGIKSVEVAGPGFINITLDSASAAAVVDTVLEAGSDYGKNDHLSG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223
           +             + P   Y G Y+  + K + D+ +++ ++                 
Sbjct: 186 LVAAAH------GEETPIDGYKGAYIDEIAKRVIDEANADGVDVLSLPRVDGGADQDGNP 239

Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               + +     +  +V  M   I+  +K   +  D++  E+  +      +   I +L 
Sbjct: 240 LGEGDSEQREEFRKRAVPMMFDEIQRSMKNFRVNFDVWFHENSLY--SDGEVDQAIADLR 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G ++E                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 298 ARGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+  A  +K  + + +L+ +LV + +DG  
Sbjct: 342 RNKRHRETNPADVAIYMLGADHHGYIGRMMAMCEAFGDKPGENMQILIGQLVNVMKDGKA 401

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ +T+  + D +G D+ R+ +     +  +D D   +   S ENPV+YVQYA
Sbjct: 402 VRMSKRAGNVVTIDDLTDAIGVDASRYSLARTDYNSPVDIDLNLLSSHSNENPVYYVQYA 461

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A       +           + E        +  LA++P ++  A   + 
Sbjct: 462 HARSCNVDRNAAAAGITYEGADVSLLDTTADGEV-------LAALAQWPALLREAGDLRA 514

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-R-------------LQLV 563
           P+++A YL DLA+ +H  ++  R  P          +     R             L+L 
Sbjct: 515 PHRVAHYLEDLAATYHKWYNVERVVPMELTDPEARGEQADAIRIAKAPEPARAAARLKLN 574

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV ++I  GL+++GV +P++M
Sbjct: 575 DAVKTVIAEGLDLLGVTAPDKM 596


>gi|262277231|ref|ZP_06055024.1| arginyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224334|gb|EEY74793.1| arginyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 567

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 215/586 (36%), Positives = 336/586 (57%), Gaps = 20/586 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F  + +     +K+I     ++K I+ +I +E P+    G +S NA +IL+  L   
Sbjct: 1   MNIFDYYKNLFLKIIKDI----PIDKSIIKKITVETPKQKIFGDISFNAPLILASSLKKQ 56

Query: 61  PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P+ +A  I   I+  + D + + +A  GFIN         K +  I  +   YG+    K
Sbjct: 57  PMQLANEIKELIQAANNDFEKIEVAKPGFINFTFKKEIFLKFIKIIDKN---YGKPTSTK 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+NIEFVSANPTGP+HVGHCR A+ GD L++ + F G+ V +EYYIND G QI     
Sbjct: 114 SNKINIEFVSANPTGPLHVGHCRGAIFGDVLSNFLKFYGHNVVKEYYINDYGNQIYLFVK 173

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV++R  +          +G YPG Y+  + K++     +E ++  +E  + I+  Y+++
Sbjct: 174 SVYFRIIELQKGKAFPEDQGLYPGEYIIDIAKDVLKNIKNENISSFDE-TISILTPYAIK 232

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           + + II+ DL  + I HD F+SE D    D   + + I+ L  +G VY G+LP PK    
Sbjct: 233 SALDIIKKDLDLMGIVHDNFVSESDIVNRDI--LSEAIEKLKNKGDVYTGVLPKPKGDAE 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                 R+QLLF+S+  GDDVDR L KSD ++TYFA D+AY   K +R FD  I ++G+D
Sbjct: 291 DW--EPREQLLFKSSKYGDDVDRALQKSDNTWTYFANDVAYHYDKLKRNFDYYINILGAD 348

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+GYVKRL +   A++  K   ++ L ++V+LY+ G P +MSKRAGDFI  + ++D VG 
Sbjct: 349 HAGYVKRLSSAVNALNNNKT-FSIKLSQIVKLYKSGKPFRMSKRAGDFILAKDLIDAVGK 407

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           DS RFMM++R ++  LDFDF  V + SK+NP+FYVQYA AR  S+F ++           
Sbjct: 408 DSARFMMVYRSSNSQLDFDFDLVTDTSKDNPIFYVQYACARINSLFDKSNFDIEK----- 462

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P      E+    +E  LI  + E+P+++       E + + +YLY+L+S FH +W+ G
Sbjct: 463 -PITDAKLENLKYETEFNLIKKIVEWPKIVNLCYQNLEVHYIPYYLYELSSEFHTYWNAG 521

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +EN  L+ +  ++++L   RL L+  +  ++  GLNI+ V+   +M
Sbjct: 522 KENDDLKIIGHSDKELINSRLYLLQKLYLVLTIGLNILDVKVLKKM 567


>gi|23465834|ref|NP_696437.1| arginyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|39932215|sp|Q8G4V2|SYR_BIFLO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|23326531|gb|AAN25073.1| arginyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 620

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 173/639 (27%), Positives = 307/639 (48%), Gaps = 83/639 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S + + L        +  +++   D++ + RP+D AHG  ++N AM L++  G+ P
Sbjct: 7   SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK------------ILSSIVVSG 109
             +AE   A +     +  V +AG GFIN+ L  +                     +   
Sbjct: 67  RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDAVLAAGAVTDADKHLNKV 126

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            EYGRN    G  +N+EFVSANPTGP+H+G  R A VGD +A ++  +G +V REYY ND
Sbjct: 127 NEYGRNDHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 186

Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224
            G QIN  A S+   + +A    ++    + P   Y G Y+  +   +  +  S+ ++  
Sbjct: 187 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 246

Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              + +     +  +V  M   I+  +K   +  D++  E+  +
Sbjct: 247 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 306

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +   I+ L  +G +++                      F ST  GDD DR ++K
Sbjct: 307 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 348

Query: 327 SDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382
           S+G + YFAAD+AY+  K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + 
Sbjct: 349 SNGEFAYFAADIAYYWDKRHRAENSADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 408

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L+ +LV + +DG P++MSKRAG+ +T+  +V  VG D+ R+ +     ++  D D   +
Sbjct: 409 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 468

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + +NPV+YVQYA+AR +++ R A      + ++     ++  E++      +++  L
Sbjct: 469 ASHTNDNPVYYVQYAHARSKNVDRNAAAAG--ISYEGADLALLDTEADG-----EVLAAL 521

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546
           A++P V+  A   ++P+K+A YL +LA+ +H  ++  R  P                 L 
Sbjct: 522 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 581

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +         RL+L  AV  +I +GL+++GV +P +M
Sbjct: 582 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620


>gi|284045965|ref|YP_003396305.1| arginyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950186|gb|ADB52930.1| arginyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 548

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 183/587 (31%), Positives = 275/587 (46%), Gaps = 41/587 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M       + +++       +            +ERPR    G  STNAAM+L+  +G  
Sbjct: 1   MTPLQQLRAAVEDA--SAALRGDGAAAGGTAPTVERPRREGFGDYSTNAAMLLAPRVGKP 58

Query: 61  PLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           P  IAE + A ++      ++   +AG GF+NL+L+  +    L  ++ +G  +G     
Sbjct: 59  PREIAEQLGAALQERLGGALERYEVAGPGFLNLFLADDWYAGALQHVLGAGTRFGAGGAT 118

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V +EFVSANPTGP+     R A  GD LA ++ F G+EV REYY+NDAG+QI  L 
Sbjct: 119 APERVLVEFVSANPTGPVVAASGRHAAYGDALARILEFHGHEVAREYYLNDAGSQIRKLG 178

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  R +        D+PEG Y G Y+  + +E+      +                +V
Sbjct: 179 ESVKARAR------GEDVPEGGYEGDYVVELAREIPGAADGDPAELA---------RVAV 223

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M   I+  L+   + +D F +E   + GDPSP++     L + G+ Y           
Sbjct: 224 GLMYGRIKATLERYGVTYDRFFNESSLYEGDPSPVKQAEAELEKLGHTYRH--------- 274

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L  R+T  GDD DR L +S+G  TYFA+D+AY + K ERGFD  + V G+
Sbjct: 275 -------DDALWLRTTTFGDDKDRVLERSNGEPTYFASDVAYLESKRERGFDRQLNVFGA 327

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH GYV RL+A   A+     ++ +L+  LV     G   KMSKR G F TL  ++DE+G
Sbjct: 328 DHHGYVGRLKAAFEALGGDPEKLEILIMRLVHFVEGGEREKMSKRRGVFTTLDELLDELG 387

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ ML R +   LD D    ++QS ENPV+YVQYA+AR  S+  +A          
Sbjct: 388 VDATRYFMLQRSHDTALDLDLDLARKQSNENPVYYVQYAHARIASMLARAGADVVGGALA 447

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                   +    D +E  L+  L  +P  +  A   + P++L  Y  +LA  F   +  
Sbjct: 448 SVAGGAGARSQALDPAERVLLKKLLAFPDEVAEAAEKRAPHRLTAYALELAQDFTAFYRD 507

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       + A    +   R+ L       I   L ++GV +P+ M
Sbjct: 508 CR------VLGAEGEGVEAYRIALSVTAQRTIAQALGLLGVSAPDSM 548


>gi|160903090|ref|YP_001568671.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360734|gb|ABX32348.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 549

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 188/581 (32%), Positives = 301/581 (51%), Gaps = 34/581 (5%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    +KN +      I V +  L    IE P     G  S+N A +L++ L   P  IA
Sbjct: 2   EIIDLIKNQINIALSDIGVSEMEL-NFTIETPPKDDMGDFSSNVAFLLTKRLRKSPQEIA 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +++   +      + V  A  GF+N ++SP   ++I S I+ +   YG+  IGKG  +  
Sbjct: 61  QILKEELVKSSFFEKVDNAN-GFLNFFVSPQIYQRICSKILSNPKTYGKFDIGKGANIQF 119

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF S NPTGP+ V H R AV+GD LA++   +GY V RE Y+NDAG QI  L+ S++ RY
Sbjct: 120 EFASINPTGPITVAHGRQAVMGDVLANIYEQAGYVVQREMYLNDAGRQIKLLSYSLWVRY 179

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            + L  +  ++PE  Y G YL    K++ +KY  +  +  +E+   I +   ++ M+K +
Sbjct: 180 NEIL-GSKYEIPEDGYRGEYLVDTAKKVLNKYGEKFKDKWDEETEDIFRKEVLEDMLKNM 238

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + L+ +N+  D+  SE    +     +   +++L  +GYVYE                 
Sbjct: 239 LETLEKINVNFDVIFSEQLLFKNKM--VEKTLNDLKSKGYVYE----------------K 280

Query: 306 RKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
              L F+ + + D+ D+ L++S D   TYF  D+AY   KY RGFD +I +MGSDH G++
Sbjct: 281 DDALWFKVSDLIDENDKVLIRSKDSMPTYFCDDIAYHYYKYLRGFDTVIDIMGSDHHGHI 340

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R+ A A A+   +  + ++L + V + +    IKMS R+G+F TL  ++  VG D+VR+
Sbjct: 341 PRMMASAKALGLPENFLKIILHQFVNVKKGEEIIKMSTRSGEFFTLDDLIQNVGKDAVRY 400

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
                     L+FD     ++S ENPV+YVQYA+AR  SIF++A+    + +        
Sbjct: 401 FFAMVDPDTTLNFDIDLAIKKSNENPVYYVQYAHARICSIFKEAQKRGINYEL------F 454

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +  E+  +  E  L+  L+ +  V+  A I  +P  L  YL  +AS FH  +++      
Sbjct: 455 LGLENLKEDEEKLLMRELSLFTNVLTKAVIQNKPNLLTQYLERVASRFHHFYNN------ 508

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  + A N +L   RL L HA   +I  GL+I+GV +P  M
Sbjct: 509 LSVLNAENYELIQGRLNLCHATKIVIARGLSILGVNAPESM 549


>gi|110597342|ref|ZP_01385630.1| arginyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341178|gb|EAT59646.1| arginyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 552

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 175/559 (31%), Positives = 289/559 (51%), Gaps = 35/559 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90
           I IE+P D   G  STN A + ++ L  +P  +A+ I+  +   PD +  + +AG GFIN
Sbjct: 24  IRIEQPADKKFGDFSTNIAFLAAKELRKNPRELAQQIIPHLSFPPDTIAKIEVAGAGFIN 83

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            YL+P ++ + +  +++    YG    GKG +  +E+VSANPTGP+ +G  R  V+GD +
Sbjct: 84  FYLTPLFIMQSVEQVLLYTDRYGEGASGKGKRAIVEYVSANPTGPLTIGRGRGGVLGDCI 143

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L A  GY++TREYY NDAG Q+  L  SV  RY++ L     + P  +Y G Y++ + 
Sbjct: 144 ANLFATQGYDITREYYFNDAGRQMQILGESVKLRYRE-LCGQIVEFPATHYQGDYIREIA 202

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +++ + + + L    E   + + K+ +   +   IR  L+ L I+HD F +E   +  D 
Sbjct: 203 EQVFNDHGAALAGTEE---VDLFKNTAESIIFSAIRATLERLGIRHDSFFNEHTLYTPDE 259

Query: 271 SPI---RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           +     + +I+ L  + ++ +                      F +T +G + D+ L+KS
Sbjct: 260 TGTTANQRVIEALGEKEFISKY----------------DGATWFMTTKLGQEKDKVLIKS 303

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            G  +Y   D+AY   KY+RGFD ++ V G+DH      +      + E  ++I + + +
Sbjct: 304 TGEPSYRLPDIAYHLTKYKRGFDVIVNVFGADHIDEYPDVIEALKILGEDTSRIRIAINQ 363

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    DG  +KMS R G+   L  ++D+VG+D+ R   + R     L+FD    K+QS+
Sbjct: 364 FVTTTVDGQSVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKKQSR 423

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYP 506
           ENPVFY+ YA+AR  S+ R AK    ++ FD             D  +E+QL   L +YP
Sbjct: 424 ENPVFYLHYAHARICSLLRLAK---QEIGFDPHSDPDYHLLRLLDNPAEIQLGFALLDYP 480

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +I+ +    EP K+  YL+ LA +FH  +   +E P L+       ++   RL L  A 
Sbjct: 481 DMIKTSLRLLEPQKMVEYLHSLAELFHRFY---QECPILK----AEPEIARARLFLSLAT 533

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +G  I+GV +P  M
Sbjct: 534 RQVLRNGFRILGVSAPESM 552


>gi|212715297|ref|ZP_03323425.1| hypothetical protein BIFCAT_00189 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661754|gb|EEB22329.1| hypothetical protein BIFCAT_00189 [Bifidobacterium catenulatum DSM
           16992]
          Length = 616

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 179/622 (28%), Positives = 298/622 (47%), Gaps = 74/622 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  + N    +  + K      D      +  + RP+D AHG  ++NAAM L++  G+ 
Sbjct: 26  LSELIFNIANNLVNEGKAGTLTTDLIPPQAKFAVMRPKDRAHGDWASNAAMQLAKKAGMK 85

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AEL  A +     + SV +AG GFIN+ L  +    ++ +++  G  YG+N    G
Sbjct: 86  PRDFAELFAAELANADGIKSVEVAGPGFINIVLDSASAAAVVDTVLGEGTNYGKNDHLSG 145

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 146 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 205

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-------------------L 221
           +             + P   Y G Y+  + + + D+ +++                    
Sbjct: 206 LVAAAH------GEETPIDGYKGAYIDEIARRVIDEANADGVAILDLPRVDGGVDNDGNP 259

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L   + +     +  +V  M + IR  +K   +  D++  E+  +      +   I +L 
Sbjct: 260 LGEGDSEQREEFRKRAVPMMFEEIRKSMKDFRVNFDVWFHENSLY--SDGEVDKAIADLR 317

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G +YE                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 318 ERGDIYE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 361

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG  
Sbjct: 362 RNKRHRDNDPADIAIYMLGADHHGYIGRMMAMCAAFGDEPGENMQILIGQLVNVLKDGKA 421

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ +T+  + D +G D+ R+ +     +  +D D   +   S ENPV+YVQYA
Sbjct: 422 VRMSKRAGNVVTIDDLTDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNENPVYYVQYA 481

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A       +           + E        +  LA++P ++  A   + 
Sbjct: 482 HARSCNVDRNAAAAGITYEGADVSLLDTAADGEV-------LAALAQWPALLREAGDLRA 534

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-R-------------LQLV 563
           P+++A YL DLA+ +H  ++  R  P          +     R             L+L 
Sbjct: 535 PHRVAHYLEDLAATYHKWYNVERVVPMELTEPEARGEQAEALRIAKAPEPARAAARLKLN 594

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV ++I  GL+++GV +P+ M
Sbjct: 595 DAVKTVIAEGLDLLGVAAPDRM 616


>gi|157364585|ref|YP_001471352.1| arginyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157315189|gb|ABV34288.1| arginyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 547

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 182/577 (31%), Positives = 291/577 (50%), Gaps = 34/577 (5%)

Query: 10  RLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            LK  +K E+   I+     L    ++   +   G  +TNAA++ SR     P+ +AE +
Sbjct: 4   LLKEAIKKELLGAIEKVVGQLYSFEVDVAPE-NFGDFATNAALVGSRYAKKPPMQLAESL 62

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +K     +SV +A  GF+N  +  S L KI+ +IV               K+  E+ 
Sbjct: 63  KDILKQSELFESVQVAKPGFLNFVVRKSTLIKIIETIVEKDD--YPVEKSGQEKIQFEYG 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP  VGH R  V+GD L+++    GY+V RE YINDAG QI  LA S++ RY Q 
Sbjct: 121 SANPTGPFTVGHGRQIVIGDILSNVFKALGYDVIREMYINDAGRQIRLLAKSLWVRYNQV 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   + D+PE  Y G YL  + K+L ++   +       +     + Y+V +++  ++ D
Sbjct: 181 LGVEEIDIPEDGYHGEYLIEIAKKLVEEVEEKFKMKWNNEIEGFFQKYAVDSILADMKSD 240

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L+ LN   DI+ SE      D   + ++++ L +  YVY                     
Sbjct: 241 LRLLNCSFDIYFSEKSL--IDDGTVDEVLEILEKNSYVYR----------------KDGA 282

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L F+ +   D+ D+ L++ DG++TYF  D+AY   K++RGF  +  + GSDH G+V R++
Sbjct: 283 LWFKVSEFVDEEDKVLIRKDGTFTYFLTDIAYHYKKHKRGFSKVYDIWGSDHHGHVPRMK 342

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+  +   +NV+L + V L R    ++MS R+G+F+TL+ +V+E G+D+ R+    
Sbjct: 343 AAMRALGVEDGFLNVILHQFVTLKRGDEIVRMSTRSGNFVTLKELVEEAGADATRYFFAM 402

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
              +  + FD    K+QS +NPV+YVQYA+AR  S+F QAK      +           +
Sbjct: 403 IDPNTHMVFDLNLAKQQSSDNPVYYVQYAHARICSLFEQAKAKSVSFEKGK------DLD 456

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              D  E  LI+ +  +   +++A     P KL  YL  LA  FH  ++          V
Sbjct: 457 LLNDKVETDLILRIDGFEDALKDAARTLSPNKLTQYLEQLAYDFHSFYTKC------LIV 510

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N KL+  RL L +A   ++  GL+++GV +P +M
Sbjct: 511 DPKNMKLSNARLNLSYAAKLVLKKGLSLLGVNAPEKM 547


>gi|218960696|ref|YP_001740471.1| Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729353|emb|CAO80264.1| Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 549

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 176/579 (30%), Positives = 298/579 (51%), Gaps = 31/579 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   + E    +K+  +      +E P +   G  STNAA++L +   + P  +A+
Sbjct: 2   IKELLHKNIVEALDNLKLNHE--KEFTVEIPNNPEFGDYSTNAALVLGKENKMKPKDLAD 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV  +K +     + IAG GFIN +LSPS  +++   I  S  +YG++  G   K+ +E
Sbjct: 60  KIVKELKKNKAYKKLEIAGPGFINFFLSPSLYQQVFWEIYKS-EDYGKSDFGNQEKILLE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTGP+++   R A  GDTL  +M + GY   RE+YINDAG Q++ LA S+  R +
Sbjct: 119 FVSANPTGPLNIVSARAAAFGDTLYRIMKYVGYAPAREFYINDAGNQVDILAESLELRLR 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +       + P   Y G Y+KH+   L     + +   PE+  L  +K++++  ++++ R
Sbjct: 179 EIHGEKIGEFPYEAYHGEYVKHLAHRLNALEGTRVFMLPEKDRLEHLKEFALSELLEMQR 238

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + L+   +  + ++SE          + +++  L      YE                  
Sbjct: 239 NSLEKFGVVFEGWVSEKALRA--EGVVEEVLSYLTEADCTYE----------------KE 280

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + F ST  GDD DR L+KSDGS TYF  D+AY   K +RGF  +I + G DH GYV R
Sbjct: 281 DAIWFNSTKYGDDKDRVLMKSDGSITYFVPDVAYHLTKIQRGFTKLIDIFGPDHHGYVPR 340

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   A++   + +  +  + V ++  G  +KMSKRAG  +T+  ++  VG D+ R+  
Sbjct: 341 IRAAFRALNYDDSILEFIFLQQVNIFESGERVKMSKRAGKIVTMDDLISVVGKDAARYFF 400

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           + RK +  L+FD     +++ ENPV+Y QYA+AR  SI ++A+     +    F + +I 
Sbjct: 401 IARKANAHLNFDLELALKKNNENPVYYCQYAHARICSIIKKAR--SEKIYPKHFKKEMIK 458

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           + ++    EL LI  +A+ P ++    + +EP++L  Y+ +LAS+ H ++   +      
Sbjct: 459 KLNK--PEELALIQKMADLPELLILIAVHREPHRLTTYIEELASLLHHYYEKYQ------ 510

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N  L+  RL L++ V  ++     ++G+ +P  M
Sbjct: 511 IVNVKNLALSQARLMLLYTVRKVMQICFELMGISAPETM 549


>gi|163783161|ref|ZP_02178155.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881495|gb|EDP75005.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 581

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 205/616 (33%), Positives = 329/616 (53%), Gaps = 68/616 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +      ++++ ++ +            +  +E+PRD  HG L+TN A +LSR L   P 
Sbjct: 1   MREQLEKKIQDAIRRLFSV------EPPQFKVEKPRDEKHGDLATNVAFLLSRELKRAPN 54

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +   +  D D++    A +GF+N+  S  +  +  S ++  G EY R  +G G K
Sbjct: 55  DIASQLAEELSRDADLEGAE-AVRGFVNVRFSREFFTEEFSKLLREGEEYYRENLGGGMK 113

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EFVSANPTGP+H+GH R AVVGDTLA L  F GY VTREYYINDAG Q+  L +SV 
Sbjct: 114 IQLEFVSANPTGPLHLGHGRGAVVGDTLARLFRFYGYNVTREYYINDAGRQVYLLGVSVL 173

Query: 183 WRYQQALYNNDSDLPE-------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLP---- 231
           +RY + L+  + D PE         Y G Y+  + + L +     LL    E+       
Sbjct: 174 FRYLE-LFGREKDRPEIKELFEKEGYKGQYVVELARLLREAVGELLLKGEVEEARKKILS 232

Query: 232 ----------------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                                 +   + + AMM  IR DL  ++I+ D++ SE   +  +
Sbjct: 233 HGYSFELGYIKKYRPNREPDVELCAAFGLDAMMDEIRRDLSEMDIEFDVWYSERSLY--E 290

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + ++I+  + +G VYE                +   L  +++  GDD DR L KSDG
Sbjct: 291 RGLVDELIEEFSSRGLVYE----------------EEGALWLKTSEFGDDKDRVLRKSDG 334

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
           SYTYFA+D+AY   K++RGF+ ++ + G+DH GY+ R++A    +   +  + V L ++V
Sbjct: 335 SYTYFASDIAYHWDKFKRGFEKVLDLWGADHHGYIPRVKASLKMLGIPEDWLEVYLIQMV 394

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L+++G  +KMSKRAG+F+TLR +VDEVG+D+VR + L +++   LDFD  +VKE+S EN
Sbjct: 395 KLFKEGKEVKMSKRAGNFVTLRELVDEVGADAVRLVFLTKRSDTPLDFDVDRVKEKSSEN 454

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           PVFYVQYA+AR   +FR+ ++              + +  E   +EL+L+  +      +
Sbjct: 455 PVFYVQYAHARISGVFREFRERTGKDPEKEDFSEFLKELKE--DAELKLMRKVLMMKDEL 512

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            + T+ ++P+ + + L DLA  FH +++H R       +  ++  L   R+ L+  + S 
Sbjct: 513 MDVTLKRDPHLITYALIDLAGTFHNYYNHHR-------IIGSDHNLMFGRIALLKGIRSA 565

Query: 570 INSGLNIIGVESPNEM 585
           I   L +IGV +P +M
Sbjct: 566 IRISLKLIGVSAPEKM 581


>gi|306822087|ref|ZP_07455470.1| arginine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802514|ref|ZP_07696619.1| arginine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304554636|gb|EFM42540.1| arginine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220831|gb|EFO77138.1| arginine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 596

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 179/621 (28%), Positives = 303/621 (48%), Gaps = 71/621 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S++ + L        +  +++    ++ + RP+D AHG  ++NAAM L++  G+ P
Sbjct: 7   SELISKIAHALVAAGKAGTLTDELIPPVSKLTVMRPKDRAHGDWASNAAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AEL  A +     + SV +AG GFIN+ L  +    ++ +++ +G  YG+N    G 
Sbjct: 67  HDLAELFAAELAQSDGIKSVEVAGPGFINIVLDSASAAAVVDAVLEAGNAYGKNDHLGGE 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S+
Sbjct: 127 TLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKSL 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELL 222
                        + P   Y G Y+  + + + D+  S                   E L
Sbjct: 187 VAAAH------GEETPIDGYKGAYIDEIAQRVIDEAKSDGIDILDLPRIDGGKDDKGEPL 240

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              + +     +  +V  M   IR  +K   +  D++  E+  +      +   I +L  
Sbjct: 241 GEGDSEQREEFRKRAVPMMFDEIRRSMKNFRVNFDVWFHENSLY--SDGEVDKAIADLRE 298

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G +YE                      F ST  GDD DR ++KSDG+Y YFAAD+AY++
Sbjct: 299 RGDIYE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYYR 342

Query: 343 CKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPI 398
            K  R  D     IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG  +
Sbjct: 343 NKRHREADPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGRNMQILIGQLVNVMKDGKAV 402

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +MSKRAG+ +T+  + + +G D+ R+ +     +  +D D   +   S ENPV+YVQYA+
Sbjct: 403 RMSKRAGNVVTIDDLTEAIGVDASRYSLARTDYNSPVDIDLNLLASHSNENPVYYVQYAH 462

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  ++ R A       D           + E        +  LA++P ++  A   + P
Sbjct: 463 ARSCNVDRNAAAAGITYDGADVSLLDTVADGEV-------LAALAQWPALLREAGDLRAP 515

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-R-------------LQLVH 564
           +++A YL DLA+ +H  ++  R  P          +     R             L+L  
Sbjct: 516 HRVAHYLEDLAATYHKWYNVERVVPMALTDPEARGEDAEAVRIAKAPEPARAAARLKLND 575

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV ++I  GL+++GV +P+ M
Sbjct: 576 AVRTVIAEGLDLLGVTAPDRM 596


>gi|171742108|ref|ZP_02917915.1| hypothetical protein BIFDEN_01214 [Bifidobacterium dentium ATCC
           27678]
 gi|283456769|ref|YP_003361333.1| arginyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171277722|gb|EDT45383.1| hypothetical protein BIFDEN_01214 [Bifidobacterium dentium ATCC
           27678]
 gi|283103403|gb|ADB10509.1| arginyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 596

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 179/621 (28%), Positives = 303/621 (48%), Gaps = 71/621 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++  S++ + L        +  +++    ++ + RP+D AHG  ++NAAM L++  G+ P
Sbjct: 7   SELISKIAHALVAAGKAGTLTDELIPPVSKLTVMRPKDRAHGDWASNAAMQLAKKAGMKP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +AEL  A +     + SV +AG GFIN+ L  +    ++ +++ +G  YG+N    G 
Sbjct: 67  HDLAELFAAELAQSDGIKSVEVAGPGFINIVLDSASAAAVVDAVLEAGNAYGKNDHLGGE 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S+
Sbjct: 127 TLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKSL 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELL 222
                        + P   Y G Y+  + + + D+  S                   E L
Sbjct: 187 VAAAH------GEETPIDGYKGAYIDEIAQRVIDEAKSDGIDILDLPRIDGGKDDKGEPL 240

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              + +     +  +V  M   IR  +K   +  D++  E+  +      +   I +L  
Sbjct: 241 GEGDSEQREEFRKRAVPMMFDEIRRSMKNFRVNFDVWFHENSLYSN--GEVDKAIADLRE 298

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G +YE                      F ST  GDD DR ++KSDG+Y YFAAD+AY++
Sbjct: 299 RGDIYE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYYR 342

Query: 343 CKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPI 398
            K  R  D     IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG  +
Sbjct: 343 NKRHREADPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGRNMQILIGQLVNVMKDGKAV 402

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +MSKRAG+ +T+  + + +G D+ R+ +     +  +D D   +   S ENPV+YVQYA+
Sbjct: 403 RMSKRAGNVVTIDDLTEAIGVDASRYSLARTDYNSPVDIDLNLLASHSNENPVYYVQYAH 462

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  ++ R A       D           + E        +  LA++P ++  A   + P
Sbjct: 463 ARSCNVDRNAAAAGITYDGADVSLLDTVADGEV-------LAALAQWPALLREAGDLRAP 515

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-R-------------LQLVH 564
           +++A YL DLA+ +H  ++  R  P          +     R             L+L  
Sbjct: 516 HRVAHYLEDLAATYHKWYNVERVVPMALTDPEARGEDAEAVRIAKAPEPARAAARLKLND 575

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV ++I  GL+++GV +P+ M
Sbjct: 576 AVRTVIAEGLDLLGVTAPDRM 596


>gi|217077840|ref|YP_002335558.1| arginyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037695|gb|ACJ76217.1| arginyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 543

 Score =  482 bits (1240), Expect = e-133,   Method: Composition-based stats.
 Identities = 174/575 (30%), Positives = 294/575 (51%), Gaps = 33/575 (5%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++  + E    I  E+    +  +E P D   G  STN A+I S+     P  +A+L V 
Sbjct: 2   IRKVINERLESILREEGFEYQFNVEIP-DENFGDYSTNIALIGSKHFKKPPREVAKLFVD 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           ++  +     V IAG GFIN  +S  +   ILS ++     Y + +     K+ +E+ SA
Sbjct: 61  KLSKESIFSEVTIAGPGFINFRISKDFYLSILSEMIKKEKAYWK-IQKNNKKIQLEYGSA 119

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP  VGH R  V+GD L +++ F GY+VT+E YINDAG QI  L  S++ RY + L+
Sbjct: 120 NPTGPFTVGHGRQIVIGDVLGNVLEFLGYDVTKEMYINDAGRQIRLLGRSLWVRYNE-LF 178

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
             + +LPE  Y G YL    K+L D+  ++ +   +++       YSV+ ++K + D L 
Sbjct: 179 GKEYELPEDGYRGDYLIDFAKKLKDEIGNKYVEKWDDEVEKFFMKYSVENILKTMDDTLS 238

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L+   D  + E      +   +  +++    +  +YE                    + 
Sbjct: 239 MLDCGFDSKVKESFV--IEKGYVDIVLNKFKEKNMIYE----------------KDGAVW 280

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            + + V D+ D+ L++SDG+YTYF  D+AY   K+ RG+D +  + GSDH G++ R+ A 
Sbjct: 281 LKVSKVIDENDKVLIRSDGTYTYFLTDIAYHYYKFTRGYDRVYDIFGSDHHGHIPRMIAA 340

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              +   ++ ++ +L + V L R+   +KMS RAG+FITL  ++ EVG D+ R+      
Sbjct: 341 MKLLDIDESFVHFILHQFVTLKRNDEIVKMSTRAGNFITLDELIKEVGKDATRYFFAMND 400

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            +  L FD    K +S +NPV+YVQYAYAR  SIF +AK+   D+DF +        E  
Sbjct: 401 VNTHLIFDLELAKSKSNDNPVYYVQYAYARINSIFEKAKE--KDIDFKILD----NIELL 454

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  E+ +I  + E+   +        P+ L  Y++ L+  FH ++S      + + +  
Sbjct: 455 ENEHEMSIIKMMDEFIHSLYQVEEKLSPHYLTNYIFSLSEKFHSYYS------KYKILDE 508

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N+ L+  R+ L+ A+ ++      ++G+ +P +M
Sbjct: 509 ENKSLSNARMNLIFALKNVFEISFELLGISAPEKM 543


>gi|154488020|ref|ZP_02029137.1| hypothetical protein BIFADO_01588 [Bifidobacterium adolescentis
           L2-32]
 gi|154083493|gb|EDN82538.1| hypothetical protein BIFADO_01588 [Bifidobacterium adolescentis
           L2-32]
          Length = 612

 Score =  481 bits (1239), Expect = e-133,   Method: Composition-based stats.
 Identities = 178/622 (28%), Positives = 300/622 (48%), Gaps = 74/622 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  + N    +  + K      D      +  + RP+D AHG  ++NAAM L++  G+ 
Sbjct: 22  LSELIFNIANTLVSEGKAGTLTADLIPPQAKFAVMRPKDRAHGDWASNAAMQLAKKAGMK 81

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AEL  A +     + SV +AG GFIN+ L  +    ++ +++ +G +YG+N    G
Sbjct: 82  PRDFAELFAAELTNADGIKSVEVAGPGFINITLDSASAAAVVDAVLEAGSDYGKNDHLSG 141

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 142 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 201

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223
           +             + P   Y G Y+  + K + D+ +++ ++                 
Sbjct: 202 LVAAAH------GEETPIDGYKGAYIDEIAKRVIDEANADGVDVLSLPRVDGGADQDGNP 255

Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               + +     +  +V  M   I+  +K   +  D++  E+  +      +   I +L 
Sbjct: 256 LGEGDSEQREEFRKRAVPMMFDEIQRSMKNFRVNFDVWFHENSLY--SDGEVDQAIADLR 313

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G +YE                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 314 ARGDIYE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 357

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+  A  +K  + + +L+ +LV + +DG  
Sbjct: 358 RNKRHRETNPADVAIYMLGADHHGYIGRMMAMCEAFGDKPGENMQILIGQLVNVMKDGKA 417

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ +T+  + D +G D+ R+ +     +  +D D   +   S ENPV+YVQYA
Sbjct: 418 VRMSKRAGNVVTIDDLTDAIGVDASRYSLARTDYNSPVDIDLNLLSSHSNENPVYYVQYA 477

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A       +           + E        +  LA++P ++  A   + 
Sbjct: 478 HARSCNVDRNAAAAGITYEGADVSLLDTTADGEV-------LAALAQWPALLREAGDLRA 530

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-R-------------LQLV 563
           P+++A YL DLA+ +H  ++  R  P          +     R             L+L 
Sbjct: 531 PHRVAHYLEDLAATYHKWYNVERVVPMELTDPEARGEQADAIRIAKAPEPARAAARLKLN 590

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV ++I  GL+++GV +P++M
Sbjct: 591 DAVKTVIAEGLDLLGVTAPDKM 612


>gi|319942151|ref|ZP_08016469.1| arginyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804361|gb|EFW01245.1| arginyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 586

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 186/607 (30%), Positives = 299/607 (49%), Gaps = 53/607 (8%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       ++N +      + V   +     +E+P+D  HG ++   AM L+R L  +P 
Sbjct: 1   MLDQQKDAIQNLIVRALAALDVADVVP---QLEKPKDPTHGDVACTVAMQLARRLKQNPR 57

Query: 63  TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IAE +VA +K D       ++V IAG GFIN  ++ +    I+S ++  G ++GR+   
Sbjct: 58  AIAETLVAEMKADEAFATLLETVEIAGPGFINFRVAQNARAAIVSQVLQEGEKFGRSNEF 117

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G  V +E+VSANPTGP+H+GH R   +GD LA+L+   G++V+RE+Y NDAG QI  LA
Sbjct: 118 AGKSVLLEYVSANPTGPLHLGHARQGALGDVLANLLDSQGWKVSREFYYNDAGVQIGNLA 177

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPI 232
           +SV  R +Q L     +LPE  Y G Y+  + ++  DK          + +  +     +
Sbjct: 178 MSVQVRCRQ-LQGESLELPENAYHGEYIVSIARDFLDKKPVIPHGGEPIESTGDYGDTDL 236

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++ YSV  +     DDL AL ++ D F  E   +      ++  +  +   GY YE    
Sbjct: 237 IRRYSVAYLRNEQDDDLSALGVRFDNFFLESSLYT--TGAVQKTVQAIIDAGYTYEA--- 291

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                           L  R+T          DD DR + KSDG+YTYF  D+AY   K+
Sbjct: 292 -------------DNALWLRTTAFEDLGNGLRDDKDRVMKKSDGTYTYFVPDVAYHLNKF 338

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIK 399
            RG+   + + G+DH G + R+ A   A S        K     +L +++ + + G  +K
Sbjct: 339 SRGYTKAVNIQGTDHHGTIARVRAGLQAASKTLGVTIPKTFPEYILHKMLSVVKGGEVVK 398

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSKR+G+++TLR +VD  G D+ RF ++ RK      FD    K+ S ENPV+Y+QYA+A
Sbjct: 399 MSKRSGNYVTLRDLVDWAGRDAARFFLVSRKADAEFVFDVDLAKKNSDENPVYYLQYAHA 458

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  S+F  A +   ++  +      +        +   LI  +AEYP  +  A     P+
Sbjct: 459 RICSVFTNALEQGYEIP-NREALATMDLSPLNSKAAEALIGAVAEYPNTLRLAARDHAPH 517

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L +YL  LA+ FH  ++  R       V  ++      RL L+ A   ++ +GL ++G+
Sbjct: 518 ILCYYLKGLAAAFHAFYNAER-------VLVDDAVERNARLALLAAARQVLANGLALLGI 570

Query: 580 ESPNEMS 586
            +P  M+
Sbjct: 571 SAPERMA 577


>gi|295104373|emb|CBL01917.1| arginyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 604

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 187/585 (31%), Positives = 294/585 (50%), Gaps = 35/585 (5%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDV 78
              + +  L   ++E P D  +G +++N AM  +R     P  IA+ ++A +    +   
Sbjct: 35  DGTLPEAELPAFIVEIPADVKNGDIASNLAMAGARTWRKAPKMIADALLAHLPSLENSVF 94

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
             V +AG GFINL+LS S+   ++     +  EYGR   GKG K N+EFVSANPTGPMH+
Sbjct: 95  SKVEVAGPGFINLFLSQSFWAGVVLGACANK-EYGRTDHGKGAKYNVEFVSANPTGPMHM 153

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLP 197
           G+ R   +GD LA+++ +SGY+VTRE+YINDAG QI     S+  RY Q     D+  LP
Sbjct: 154 GNARGGALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEDAYPLP 213

Query: 198 EGYYPGVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKI 244
           +  Y G  +K +  E A    DKY +      EE     +    +KD    Y++   +  
Sbjct: 214 KECYQGGDIKVLAGEFAELNGDKYVAACSGLSEEALFESEAFAALKDALVAYALPKNIAA 273

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           ++ DL    I +D++  E   H  +   +  ++D L   G  Y+        ++ Q    
Sbjct: 274 LKRDLGKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAIMYRSAQYA-A 330

Query: 305 DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
               +  + T  G +    D  L++++G  TYFAAD+AY   K   RGF   I V G+DH
Sbjct: 331 KYGTVNKKKTEDGTEEEAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADH 390

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  D
Sbjct: 391 HGHVARMKGAMDAIGLHGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPID 450

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           S RF+         +DFD  +  +   +NPV+YVQYA+AR  SI ++ +           
Sbjct: 451 SARFLFNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEG----VQFA 506

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               I      + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  + + R
Sbjct: 507 GAEHIDATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR 566

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +Q  +  +   RL L   V ++I + L +  +  P +M
Sbjct: 567 -------IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604


>gi|78187934|ref|YP_375977.1| arginyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|109895014|sp|Q3B147|SYR_PELLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78167836|gb|ABB24934.1| arginyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 552

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 170/584 (29%), Positives = 283/584 (48%), Gaps = 41/584 (7%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++N L+               I+IE+P     G  +TN A + ++ L  +P  +AE
Sbjct: 5   LVAEIQNALRSASVTTGQS------IIIEKPTSPKFGDYATNIAFLAAKELKRNPRQLAE 58

Query: 67  LIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            +    +  +  V    +AG GFIN ++ P+++ +    +   G EYG+   G+G    +
Sbjct: 59  ELTGHFRFPEGTVTKTEVAGPGFINFFMEPAFIMQSAERVFREGAEYGKGREGQGKTAIV 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+ +G  R  V+GD +A+L    GY V REYY NDAG Q+  L  SV +RY
Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLAEAQGYHVNREYYFNDAGRQMQILGESVRYRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            + L     D P+ +Y G Y+  + +++  ++  +LL+    + +   +  +   +   I
Sbjct: 179 ME-LCGRTIDFPDTHYKGGYIGEIAEKIHSEHGEDLLHV---ESIEPFRSEAESIIFSSI 234

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI---RDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  L  L I HD F +E   +  D + I   +++ID L  +G++ E              
Sbjct: 235 QKTLGRLGIVHDSFFNEHTLYTADLNGISPNQNVIDRLREKGFIGEY------------- 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                   F +T +G + D+ L+KS G  +Y   D+AY   KY RGFD +I V G+DH  
Sbjct: 282 ---DGATWFLTTKLGQEKDKVLIKSSGEPSYRLPDIAYHVTKYARGFDMIINVFGADHID 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               +      +    A + + + + V    +G  +KMS R G+   L  ++D+VG D+ 
Sbjct: 339 EYPDVLEALKILGHDTAHVRIAINQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGPDAT 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R   + R     L+FD    K+QSK+NPVFY+QYA+AR  S+ R A   + ++ FD   R
Sbjct: 399 RLFFIMRSKDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLLRLA---WSEIGFDAAKR 455

Query: 483 -NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                        ELQL   + ++     +A    EP K+  Y++ +A +FH  +   +E
Sbjct: 456 PEPGVLMRLTTPEELQLAFGILDFGEASRSAFRMLEPQKMVDYMHSIAELFHRFY---QE 512

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P L+       ++   RL L  AV  ++ +G  I+G+ +P  M
Sbjct: 513 CPILK----AEPEIAEARLFLAVAVRQVLQNGFRILGISAPESM 552


>gi|50954431|ref|YP_061719.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657984|sp|Q6AG81|SYR_LEIXX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50950913|gb|AAT88614.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 562

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 184/590 (31%), Positives = 294/590 (49%), Gaps = 40/590 (6%)

Query: 5   ADFSSRLKNYLKEID-------CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
           AD S+ L   +             I   +  ++ + +ERP++  HG  S+N AM L++  
Sbjct: 4   ADLSAALFAIVTTAMDRRRATGADIAGLELTVEDVPLERPKNRGHGDWSSNVAMRLAKKA 63

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           G +P  +A  I         V S  +AG GFIN  L  +   ++  +I+ +G  YG   +
Sbjct: 64  GANPRELAAEIAEAAAGIDGVASAEVAGPGFINFRLEAAAAGQLARTILEAGAAYGTGDL 123

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             G  VN+EFVSANPTGP+H+G  R A VGD+LA ++   G +VTREYY ND G+QI+  
Sbjct: 124 YDGLLVNLEFVSANPTGPIHLGGARWAAVGDSLARILQAEGADVTREYYFNDHGSQIDRF 183

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A S+   ++          PE  Y G Y+  +  ++A  Y  +L     +    + +   
Sbjct: 184 ARSLLAAHR------GEATPEDGYGGGYIGEIAAKVAAGYDGDLAALSRDDQQEVFRSAG 237

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
              M + I+D L +  +  D++  ED  H      +   I  L   G+++E         
Sbjct: 238 TALMFQEIKDRLHSFGVDFDVYFHEDSLHA--SGAVERAIRRLDELGHIFE--------- 286

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  +   +  R+T  GDD DR +++S+G   Y + DL Y+  K ERGF+  I ++G
Sbjct: 287 -------EDGAVWLRTTAFGDDRDRVIVRSNGEPAYISGDLGYYLDKRERGFEQNIIMLG 339

Query: 358 SDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +DH GY+ RL A+  A  +     + +L+ ++V L RDG P+KMSKRAG  +TL  +VD 
Sbjct: 340 ADHHGYIGRLMAMVEAFGDIPNVNLQILIGQMVNLVRDGEPVKMSKRAGTIVTLDDLVDA 399

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ R+ ++       LD D   + ++S ENPV+YVQYA+AR RS+   A+    D  
Sbjct: 400 VGVDAARYALVRSSTDSQLDVDLDLLAKRSNENPVYYVQYAHARTRSVAANAERAGVD-- 457

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                R+    E     +E  L+  L E+PRV+  A    EP+++A  + +LA ++H  +
Sbjct: 458 -----RSAFKPELLTHETESALLGGLQEFPRVVAQAAELSEPHRVARSIEELAGLYHAWY 512

Query: 537 SHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    + R+  +           RL L  A   ++ +GL ++GV +P  M
Sbjct: 513 AVRDGSTRVIPLGEEPVTDAHRTRLWLNDATGQVLRNGLRLVGVSAPERM 562


>gi|225352613|ref|ZP_03743636.1| hypothetical protein BIFPSEUDO_04239 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156807|gb|EEG70201.1| hypothetical protein BIFPSEUDO_04239 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 616

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 179/622 (28%), Positives = 297/622 (47%), Gaps = 74/622 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  + N    +  + K      D      +  + RP+D AHG  ++NAAM L++  G+ 
Sbjct: 26  LSELIFNIANNLVNEGKAGTLTTDLIPPQAKFAVMRPKDRAHGDWASNAAMQLAKKAGMK 85

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AEL  A +     + SV +AG GFIN+ L  +    ++ +++  G  YG+N    G
Sbjct: 86  PHDFAELFAAELANADGIKSVEVAGPGFINIVLDSASAAAVVDTVLNEGANYGKNDHLSG 145

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 146 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 205

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-------------------L 221
           +             + P   Y G Y+  + + + D+ +++                    
Sbjct: 206 LVAAAH------GEETPIDGYKGAYIDEIARRVIDEANADGIAILDLPRVDGGVDNDGNP 259

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L   + +     +  +V  M   IR  +K   +  D++  E+  +      +   I +L 
Sbjct: 260 LGEGDSEQREEFRKRAVPMMFDEIRKSMKDFRVNFDVWFHENSLY--SDGEVDKAIADLR 317

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G +YE                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 318 ERGDIYE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 361

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +DG  
Sbjct: 362 RNKRHRDNDPADIAIYMLGADHHGYIGRMMAMCAAFGDEPGENMQILIGQLVNVLKDGKA 421

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ +T+  + D +G D+ R+ +     +  +D D   +   S ENPV+YVQYA
Sbjct: 422 VRMSKRAGNVVTIDDLTDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNENPVYYVQYA 481

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A       +           + E        +  LA++P ++  A   + 
Sbjct: 482 HARSCNVDRNAAAAGITYEGADVSLLDTAADGEV-------LAALAQWPALLREAGDLRA 534

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-R-------------LQLV 563
           P+++A YL DLA+ +H  ++  R  P          +     R             L+L 
Sbjct: 535 PHRVAHYLEDLAATYHKWYNVERVVPMELTDPEARGEQAEALRIAKAPEPARAAARLKLN 594

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV ++I  GL+++GV +P+ M
Sbjct: 595 DAVKTVIAEGLDLLGVAAPDRM 616


>gi|94267070|ref|ZP_01290710.1| Arginine--tRNA ligase [delta proteobacterium MLMS-1]
 gi|93452227|gb|EAT02881.1| Arginine--tRNA ligase [delta proteobacterium MLMS-1]
          Length = 558

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 186/593 (31%), Positives = 299/593 (50%), Gaps = 50/593 (8%)

Query: 7   FSSRLKNYLKEIDCKIKV----EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
             SR+K  +++   +        +       +E P+    G  +TN AM+++     +P 
Sbjct: 2   IKSRVKAAIEQGFARGVAAGYWSEAAAGDYAVEEPKRAGQGDFATNLAMVVAGREKRNPR 61

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +A  +V  +  +         + +AG GF+N +L P+  ++++  I   G E+ R+ +G
Sbjct: 62  ELAGQLVELLNGEEAARGLFARIEVAGPGFVNFFLHPAVWQQVVPEIRRRGGEFARSTVG 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +EFVSANPTGP+ VGH R AV+GD +A L+  +G+ VTREYY NDAG Q+  L 
Sbjct: 122 GGRKVLVEFVSANPTGPLSVGHGRQAVLGDAIARLLEATGHAVTREYYYNDAGRQMRVLG 181

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S   RY + L    ++ PE  Y G Y++ + +EL  +      +  +          + 
Sbjct: 182 ESTRARYLEEL-GLPAEFPEDGYQGEYIREIARELVAQQGDGWRDQSDTA---PFTARAE 237

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +A+   I + L  L I+ D + +E   +  +   I D++  L  +G VYE          
Sbjct: 238 EAIFADINNTLARLGIKFDNYYNERSLY--EKGLIDDVVAILRDKGLVYE---------- 285

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     + F+++ +G + DR ++KS G  TY   D+AY + K+ RGFD M+ V GS
Sbjct: 286 ------QDGAVWFKTSALGLEQDRVIIKSSGEPTYRLPDIAYHREKFRRGFDWMVNVFGS 339

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH   V  + A   A+     ++  ++ + V L RDG  +KMS R   F+T+  +++EVG
Sbjct: 340 DHIATVPDVLAGVRALGYDSQRVTPVIHQFVTLLRDGQQVKMSTRKATFVTVDELLEEVG 399

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF------ 472
           +D  RF  L RK    L+FD      QS+ENPV+YVQYA+AR  SI RQA          
Sbjct: 400 ADVTRFFFLMRKADSQLEFDLALAASQSQENPVYYVQYAHARLCSIARQAAAQGLQLAPS 459

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D   +      +E E   +   L       P ++E+A +A EP++L FYL DLA+ F
Sbjct: 460 DAADGPDYSLLGEAEELELLAAMAGL-------PSLLESAALALEPHRLVFYLQDLAARF 512

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           HG+++  R       +  +++ L++ RL L  A+  +I   L +IGV++P  M
Sbjct: 513 HGYYNRHR-------IVGDDQALSLARLALADALRRVIADTLGLIGVKAPESM 558


>gi|86607336|ref|YP_476099.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|109895045|sp|Q2JRC3|SYR_SYNJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86555878|gb|ABD00836.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 598

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 166/599 (27%), Positives = 301/599 (50%), Gaps = 34/599 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR-----IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            ++ +   ++      ++    L++       I+ P D  +G  +    + +++   + P
Sbjct: 14  LTAAVSESIRRASEAGQLGSLTLEQAAGVAPTIQIPSDPRYGDYACPTPLGMAKLCRMAP 73

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA+ +   + +     +  +AG G++N  L  S+L + L  ++  G ++G+       
Sbjct: 74  AQIAQTLQKHLDLPGI--ATEVAGGGYLNFRLGDSFLAERLQELLRLGEDFGKTAAPHPE 131

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +E+VSANPTGP+HVGH R A VG TLA+L+ ++G++V RE+YINDAG Q+  L  S+
Sbjct: 132 RILLEYVSANPTGPLHVGHGRWAAVGSTLANLLRWTGHQVEREFYINDAGNQMRLLGQSL 191

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R +Q L   +  LPE  Y G YL  + + L D+  + +   P         D++   M
Sbjct: 192 EVRVRQ-LQGEEVALPEDAYHGSYLVDIARRLLDQVKAGIRPLPTT--PEEYTDFAYAEM 248

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP----SPIRDIIDNLARQGYVYEGILPPPKSK 297
           +   +  L+ L  + D + SE   H  DP    S I+  +  L  +G++Y    P  +  
Sbjct: 249 LAWQKQTLQQLRTEFDHWFSERRLHAPDPQTGLSAIQQALQELQERGFLYRAKAPRGEDP 308

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                    + + F++   GDD DR + K+DGS+TY AAD+AY + K  RG+  +I ++G
Sbjct: 309 KPGA----EEAVYFKTQEFGDDKDRVVQKADGSFTYLAADIAYHRDKVRRGYQRLINILG 364

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR------DGMPIKMSKRAGDFITLR 411
           SDH GY+ RL A   A S    ++ +L+ + V+L++      +   ++MSKR G+F++L 
Sbjct: 365 SDHHGYIGRLHAAVGAFSPD-VKLEILIGQFVKLFKTDPETGEKTEVRMSKRTGNFVSLN 423

Query: 412 HVVDE----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
            ++D+    VG D+ R+ +L       ++FD     +Q+ +NPV YV Y++ARC ++ R+
Sbjct: 424 DLIDDPEIGVGVDAARWFLLSSSMDSPINFDLDLAVKQTFDNPVVYVHYSHARCCTLLRR 483

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            ++       +        +    +  E  L++ L   P  +  A   + P+K+  Y   
Sbjct: 484 LQEEEKVELTNKVTLTEQQKLPYQEPEERALLLRLLALPDELIAAAEERAPHKIIRYAEA 543

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NIIGVESPNEM 585
           +A+ F+  + + R  P L+     +  L   R+QLV A   ++ + L  I+G+ +P  M
Sbjct: 544 IAADFNKFYDNCRILPLLK----EDPLLAQARIQLVQATRQVLFNVLTGILGLSAPESM 598


>gi|160944624|ref|ZP_02091851.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443808|gb|EDP20812.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii
           M21/2]
          Length = 616

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 187/585 (31%), Positives = 293/585 (50%), Gaps = 35/585 (5%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDV 78
              + +  L   ++E P D  +G +++N AM  +R     P  IA+ ++A +    +   
Sbjct: 47  DGTLPEAELPAFIVEIPADVKNGDIASNLAMAGARTWRKAPKMIADALLAHLPSLENSVF 106

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
             V +AG GFINL+LS S+   ++     +  EYGR   GKG K N+EFVSANPTGPMH+
Sbjct: 107 SKVEVAGPGFINLFLSQSFWAGVVLGACANK-EYGRTDHGKGAKYNVEFVSANPTGPMHM 165

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLP 197
           G+ R   +GD LA+++ +SGY+VTRE+YINDAG QI     S+  RY Q     D+  LP
Sbjct: 166 GNARGGALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEDAYPLP 225

Query: 198 EGYYPGVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKI 244
           +  Y G  +K +  E A    DKY +      EE     +    +KD    Y++   +  
Sbjct: 226 KECYQGGDIKVLAGEFAELNGDKYVAACKGMDEEALFESEAFAALKDALVAYALPKNIAA 285

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           ++ DL    I +D++  E   H  +   +  ++D L   G  Y+        ++ Q    
Sbjct: 286 LKRDLGKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAIMYRSAQYA-A 342

Query: 305 DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
               +  + T  G +    D  L++++G  TYFAAD+AY   K   RGF   I V G+DH
Sbjct: 343 KYGTVNKKKTEDGTEEEAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADH 402

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  D
Sbjct: 403 HGHVARMKGAMDAIGLNGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPID 462

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           S RF+         +DFD  +  +   +NPV+YVQYA+AR  SI ++ +           
Sbjct: 463 SARFLFNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEG----VQFA 518

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               I      + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  + + R
Sbjct: 519 GAEHIDATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR 578

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +Q  +  +   RL L   V + I + L +  +  P +M
Sbjct: 579 -------IQGADPAVQQARLALCIGVKNAIFNVLTMFKINVPEKM 616


>gi|145590156|ref|YP_001156753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048562|gb|ABP35189.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 575

 Score =  478 bits (1231), Expect = e-132,   Method: Composition-based stats.
 Identities = 202/613 (32%), Positives = 291/613 (47%), Gaps = 78/613 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            +RL   L      +  E+ + +     +ERP+   HG ++ N A+ LS+P  L+P  +A
Sbjct: 6   KNRLIEMLSAALQGLAQERGLDEAPTPRLERPKAVDHGDVACNIALQLSKPWKLNPRELA 65

Query: 66  ELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           + +V  ++  P       S  IAG GFIN  LS +    ++S I+ SG  +G+     G 
Sbjct: 66  QSLVEHLQKQPGYGELIASCEIAGPGFINFRLSNAAKTAVVSEILGSGTHFGQLTPASGP 125

Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                IEFVSANPTGP+HVGH R A +GD LA+L+A  G +V RE+Y NDAG QI  LAL
Sbjct: 126 AASAMIEFVSANPTGPLHVGHGRQAALGDALANLLATQGTKVHREFYYNDAGVQIANLAL 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV  R  Q     D   PE  Y G Y+  +            ++   +  L  ++ ++V 
Sbjct: 186 SVQAR-LQGFKPGDPQWPEQAYNGEYIAEIAAAFK-------VSPDYKDDLEAIRKFAVT 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +      DLK   +Q D +  E   +      +  I+ +L   G  YE           
Sbjct: 238 YLRNEQDIDLKTFGVQFDCYYLESSLYT--DGSVAQIVQDLQSIGKTYEA---------- 285

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L  ++T  GDD DR + KSDGS+TYF  D+AY   K+ RGF  +I V GSD
Sbjct: 286 ------EGALWLKTTDDGDDKDRVMRKSDGSFTYFVPDVAYHASKWNRGFQKVINVQGSD 339

Query: 360 HSGYVKRLE----AVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           H G + R+      VA        K   + +L ++V + R G  +K+SKRAG ++T+R +
Sbjct: 340 HHGTIARVRSGLQGVAQKRGWDIPKTYPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDL 399

Query: 414 VDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
           V+                    G D+VRF ++ RK      FD     +Q+ ENPVFYVQ
Sbjct: 400 VEWSGGVTSEMTPEERELALQRGRDAVRFFLISRKADTEFVFDIDLALQQNDENPVFYVQ 459

Query: 456 YAYARCRSIFRQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YA+AR  SI  Q      DL   D  L                  L+  LAEYP V+ +A
Sbjct: 460 YAHARISSILLQWDGKPSDLAGADLSLLQSKASDH----------LLRRLAEYPEVLTDA 509

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ LAFYL DLA  FH  ++  R       V  ++  L + RL L+ A   ++ +
Sbjct: 510 AAELAPHALAFYLRDLAGDFHTFYNADR-------VLIDDPALKLARLALLSATRQVLQN 562

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P +M
Sbjct: 563 GLRVLGVSAPAKM 575


>gi|295100375|emb|CBK97920.1| arginyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 604

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 185/585 (31%), Positives = 292/585 (49%), Gaps = 35/585 (5%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI--DPDV 78
              + +  L   ++E P D  +G +++N AM  +R     P  IA+ ++A +        
Sbjct: 35  DGTLPEAELPAFIVEIPADVKNGDIASNIAMAGARTWRKAPKMIADALIAHLPALDGGVF 94

Query: 79  DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
             V +AG GFINL+L+PS+   ++     +  EYGR   GKG K N+EFVSANPTGPMH+
Sbjct: 95  AKVEVAGPGFINLFLAPSFWAGVVLGACSNK-EYGRTDHGKGAKYNVEFVSANPTGPMHM 153

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLP 197
           G+ R   +GD LA+++ +SG +VTRE+YINDAG QI     S+  RY Q     ++  LP
Sbjct: 154 GNARGGALGDCLAAVLDWSGCDVTREFYINDAGNQIQKFGKSLAVRYLQKYCGEEAYPLP 213

Query: 198 EGYYPGVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKI 244
              Y G  +K +  E A    DKY++      EE     +    +KD    Y++   +  
Sbjct: 214 AECYQGGDIKVLAGEFAELNGDKYAASCKGMDEETLFESEAFAALKDALVAYALPKNIAA 273

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           ++ DL    I +D++  E   H  +   +  ++D L   G  Y+        ++ Q    
Sbjct: 274 LKRDLSKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAVMYRSAQYA-A 330

Query: 305 DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
               +  + T  G +    D  L++++G  TYFAAD+AY   K   RGF   I V G+DH
Sbjct: 331 KYGTVNKKKTDDGTEEEAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADH 390

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+V R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  D
Sbjct: 391 HGHVARMKGAMDAIGLHGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPID 450

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           S RF+         +DFD  +  +   +NPV+YVQYA+AR  SI ++ +           
Sbjct: 451 SARFLFNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEG----VAFA 506

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
               I      + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  +   R
Sbjct: 507 GAENIDATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGSCR 566

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +Q  +  +   RL L   V ++I + L +  +  P +M
Sbjct: 567 -------IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604


>gi|284123123|ref|ZP_06386895.1| Arginyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283829298|gb|EFC33702.1| Arginyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 528

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 175/531 (32%), Positives = 292/531 (54%), Gaps = 24/531 (4%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             +S + + L +   +  ++     + +++ P+    G LS++ AM++++     PL +A
Sbjct: 9   QVASAITDALLQAQERGFLQSTHFPQPIVDFPKREEWGDLSSSVAMVIAKQEKRPPLEVA 68

Query: 66  ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           ++I  +++      + + +A  GF+N  L       +L  I  +G  YG + IG+G +V 
Sbjct: 69  QMIADQLRTSCTFLEKISVAPPGFLNFSLQQDCWFPVLEEIERTGDLYGHSKIGQGQRVL 128

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+GH R A +G+ LA L+  +GYEV +EYYINDAG Q+  LA SV+ R
Sbjct: 129 LEFVSANPTGPLHMGHGRGAALGEALARLLRSAGYEVDKEYYINDAGRQMKLLADSVYAR 188

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Y + ++  +   PE  Y G Y+K + + +      +LL    E        ++ + +++ 
Sbjct: 189 YLE-MHGREYSFPEDGYHGDYIKALAQAMDRVKGMDLLALNPEDARRECGHWASRELVRA 247

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++DL    ++ + + SE          I+  +++L ++  V+                 
Sbjct: 248 IQEDLAQFGVEFETWYSEASLFA--SGSIQAALNDLEQRDLVF----------------T 289

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                 FRS+   D+ DR + K DG YTY A+D+AY   K  RG+  +I + G+DH GYV
Sbjct: 290 QDDATWFRSSRFQDEKDRVVCKQDGDYTYLASDIAYHFDKLRRGYGWLINIWGADHHGYV 349

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++AV  A       + V+L ++VRL R G  ++MSKRAG+FITL+ VVDEVG+D+ +F
Sbjct: 350 PRMQAVIKAFGYGDDCLRVVLVQMVRLLRGGNKVEMSKRAGEFITLQDVVDEVGADAAKF 409

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L R++   L+FD    K+QS ENPV+YVQYA+AR  S+FR A +    +     P   
Sbjct: 410 FFLMRRSDTHLEFDLELAKKQSNENPVYYVQYAHARLASLFRTAHERGIRVS----PVGE 465

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
            P  +     E++L+  L+ +P ++E + +A EP+++ FYL +LA + H  
Sbjct: 466 APLSALVQPEEIRLMKQLSGFPGLLEASAMALEPHRITFYLLELAGLLHCF 516


>gi|313115112|ref|ZP_07800599.1| arginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622552|gb|EFQ06020.1| arginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 604

 Score =  475 bits (1222), Expect = e-131,   Method: Composition-based stats.
 Identities = 184/582 (31%), Positives = 293/582 (50%), Gaps = 35/582 (6%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSV 81
           + +  L   ++E P D  +G +++N AM  +R     P  IA+ ++A +    +     V
Sbjct: 38  LPEAELPAFIVEIPADTKNGDIASNIAMAGARSWRKAPKMIADALLAHLPSIENSVFAKV 97

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            +AG GFINL+L+PS+   ++     +  EYGR   GKG K N+EFVSANPTGPMH+G+ 
Sbjct: 98  EVAGPGFINLFLAPSFWASVVLGACSNK-EYGRTDHGKGAKYNVEFVSANPTGPMHMGNA 156

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGY 200
           R   +GD L++++ +SGY+VTRE+YINDAG QI     S+  RY Q     ++  LP   
Sbjct: 157 RGGALGDCLSAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQKYCGEEAYPLPAEC 216

Query: 201 YPGVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRD 247
           Y G  +K +  E A    DKY +      EE     +    +KD    Y++   +  ++ 
Sbjct: 217 YQGGDIKVLAGEFAELNGDKYVAACKGMDEETLFESEAFAALKDALVAYALPKNIAALKR 276

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           DL    I +D++  E   H  +   ++ ++D L   G  Y+        ++ Q       
Sbjct: 277 DLGKYRIDYDVWFHESTLH--ESGAVKAVVDKLLELGACYKAEDGAIMYRSAQYA-AKYG 333

Query: 308 QLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
            +  + T  G +    D  L++++G  TYFAAD+AY   K   RGF   I V G+DH G+
Sbjct: 334 TVNKKKTEDGTEEEAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGH 393

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R++    A+      ++V+L ++V L RDG P++MSKR G+ ITL  +++EV  DS R
Sbjct: 394 VARMKGAMDAIGLNGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSAR 453

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F+         +DFD  +  +   +NPV+YVQYA+AR  SI ++ +              
Sbjct: 454 FLFNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEG----VQFAGAE 509

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +      + SE+ LI  LA +P+ I  A    +P ++  ++ DLAS FH  +   R   
Sbjct: 510 KVDATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGSCR--- 566

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +Q  +  +   RL L   V + I + L +  +  P +M
Sbjct: 567 ----IQGADPAVQQARLALCIGVKNAIFNVLTMFKINVPEKM 604


>gi|227498070|ref|ZP_03928243.1| arginine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832538|gb|EEH64921.1| arginine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 533

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 174/546 (31%), Positives = 278/546 (50%), Gaps = 35/546 (6%)

Query: 6   DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           + +  ++  L          + ++ +    +ERPR   HG  +TN AM L++  G +P  
Sbjct: 5   ELAEAIRTVLLAAVADGDLNLPQEEVPLPKVERPRSREHGDWATNVAMQLAKKAGTNPRA 64

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           + EL+ AR+     V SV +AG GF+N+ L  +   ++  +I+ +G  YGRN    GT V
Sbjct: 65  LGELLAARLGEVDGVASVEVAGPGFLNIRLDAASAGELARTILRAGASYGRNDSLAGTHV 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+E+VSANPTGP+H+G  R A VGD+LA ++A  G +VTREYY ND G QI+  A S+  
Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILAACGAQVTREYYFNDHGTQIDRFARSLLA 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQ 239
             +        + PE  Y G Y+  + + +     +    +    P+ +   + +   V 
Sbjct: 185 AAR------GQETPEDGYGGAYIGEIAQTVTSGELEAGRPDPAALPDAEATEVFRARGVD 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M   I+ +L   +   D+F  ED  H  +   +   I+ L  +G + E           
Sbjct: 239 LMFDSIKAELHEFHSDFDVFFHEDSLH--ESGAVAAAIERLRERGVIEEH---------- 286

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                       R+T  GDD DR L+KSDG   YFA D+AY+  K +RG D  IY++G+D
Sbjct: 287 ------DGATWLRTTDFGDDKDRVLIKSDGDAAYFAGDVAYYLDKRQRGADCAIYLLGAD 340

Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           H GY+ R+ A+ AA  +     + +L+ +LV L ++G P++MSKRAG  +TL  +V  VG
Sbjct: 341 HHGYIGRMMAMCAAFGDTPGVNMQILIGQLVNLVKNGQPVRMSKRAGTIVTLEDLVSAVG 400

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
            D+ R+ +       ++D D   +   S ENPV+YVQYA+AR R++ R A +   + +  
Sbjct: 401 VDAARYALTRSSMDSMIDIDLDLLASSSNENPVYYVQYAHARTRNVARNAAEHGVEREGA 460

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +        ++            LA+YP V+  A   +E +++A YL +LA  +H  ++ 
Sbjct: 461 IAFDPAALDDAADSALL----GVLAQYPAVVAQAASLREQHRVARYLEELAGAYHAWYAA 516

Query: 539 GRENPR 544
            R  PR
Sbjct: 517 TRVTPR 522


>gi|145220535|ref|YP_001131244.1| arginyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189083541|sp|A4SGY3|SYR_PROVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145206699|gb|ABP37742.1| arginyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 552

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 165/595 (27%), Positives = 281/595 (47%), Gaps = 63/595 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F   +++ L+    +          + IE+P     GH STN A + ++ LG +P T+A+
Sbjct: 5   FRPVIQDALRSAGIETGQP------VQIEKPASAKFGHFSTNIAFLSAKELGKNPRTLAQ 58

Query: 67  LIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            ++  ++     ++   +AG GFIN +L+P ++   L  ++  G  +GR   G G K  +
Sbjct: 59  ELIGHLRFPSGSIEKTEVAGPGFINFFLTPPFIMDSLGEVLRQGEAFGRGTSGNGEKAIV 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+VSANPTGP+ +G  R  V+GD +A+L    GY VTREYY NDAG Q+  L  SV +RY
Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLFEAEGYSVTREYYFNDAGRQMQILGESVRFRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +       D P+ +Y G Y+  +   +  +      +  + +     K  +   +   I
Sbjct: 179 LERC-GRKVDFPDTHYQGGYIGDIADRIYQEQGD---SLADAEGTGEFKSTAEAIIFSSI 234

Query: 246 RDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  L+ L I+HD F +E   +       +    +ID L ++G++                
Sbjct: 235 KKTLERLGIRHDSFFNEHTLYTPDENGATRNSRVIDALRQKGFI---------------- 278

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D       F +T +G + ++ L+KS G  +Y   D+AY   KY+RGF  ++ V G+DH  
Sbjct: 279 DEYEGATWFLTTKLGQEKNKVLVKSTGEPSYRLPDIAYHLTKYDRGFGVIVNVFGADHID 338

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               +      +    ++I + + + V    DG  +KMS R G+   L  ++D+VG+D+ 
Sbjct: 339 EYPDVIEALKILGHDTSRIRIAINQFVTTTVDGETVKMSTRKGNADLLDDLIDDVGADAT 398

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R   + R     L+FD    ++QSK+NPVFY+QYA+AR  S+ R A           +  
Sbjct: 399 RLFFIMRSKDSHLNFDVDLARKQSKDNPVFYLQYAHARICSLLRMA-----------WSE 447

Query: 483 NVIPQESEFDTSELQLIVHLA------------EYPRVIENATIAQEPYKLAFYLYDLAS 530
           N    E   D   L L+  L+            ++P ++ +A    EP K+  Y++ +A 
Sbjct: 448 NGFNPEKLPD---LALLKTLSSPEELQLALALLDFPDMVRSALRLLEPQKMVDYMHSIAE 504

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++H  +   +E P L+            RL L  A   ++ +G  I+G+ +P  M
Sbjct: 505 LYHRFY---QECPILK----AEADTANARLLLSLATRQVLQNGFRILGISAPESM 552


>gi|171319601|ref|ZP_02908697.1| arginyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095172|gb|EDT40174.1| arginyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 539

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 183/568 (32%), Positives = 283/568 (49%), Gaps = 62/568 (10%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           M L++PLG +P  +AE IVA +   P     VD+  IAG GFINL L+ +  + +++++ 
Sbjct: 1   MQLAKPLGTNPRQLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVF 60

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
             G  +G +   KG +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE+Y
Sbjct: 61  EQGRAFGTSEREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFY 120

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSE 220
            NDAG QI  LA+S   R +  L   D+  PE  Y G Y+  + ++       A K    
Sbjct: 121 YNDAGVQIGNLAISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEP 179

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           +    +   L  ++ ++V  +      DL+A  ++ D +  E   +      +   +D L
Sbjct: 180 VTGAGDIDDLDAIRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDAL 237

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            + G  YE                    L  R+T  GDD DR + KSDG+YTYF  D+AY
Sbjct: 238 IKAGMTYE----------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAY 281

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPI 398
              K+ERGF  +I + GSDH G + R+ A    +     K   + +L ++V + RDG  +
Sbjct: 282 HVTKWERGFTQVINIQGSDHHGTIARVRAGLQGLRIGIPKGYPDYVLHKMVTVMRDGQEV 341

Query: 399 KMSKRAGDFITLRHVVDE---------------------VGSDSVRFMMLWRKNSELLDF 437
           K+SKRAG ++T+R +++                       G D+VRF ++ RK      F
Sbjct: 342 KLSKRAGSYVTVRDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVF 401

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D     +Q+ ENPV+YVQYA+AR  S+     ++    + D+                + 
Sbjct: 402 DIDLALKQNDENPVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSPQAVS 458

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LAEYP ++ +A     P+ +AFYL DLA  FH  ++  R       V  ++     
Sbjct: 459 LMQKLAEYPDMLTHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRN 511

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            R  L+ A   ++ +GL ++GV +P +M
Sbjct: 512 ARAALLAATRQVLENGLAVLGVSAPAKM 539


>gi|296271958|ref|YP_003654589.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096133|gb|ADG92083.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 530

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/571 (33%), Positives = 313/571 (54%), Gaps = 44/571 (7%)

Query: 17  EIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           +I  K  +E+ + L+ +V+E+P+D + GH +T  A  L++ L  +P+ IA+ +  + K  
Sbjct: 2   QILVKKNIEEILELENLVLEKPKDISLGHFATPVAFSLAKELRKNPMQIAQELADKFKDS 61

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
              DSV  A KGF+N  LS ++L  ++S +      + +    K  K+ +E+VSANPTGP
Sbjct: 62  EIFDSV-TAVKGFVNFKLSNTFLENLISKLFEDENSFAKGE-NKNEKILLEYVSANPTGP 119

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+GH R A+ GDTLA +    GY+V  EYYINDAGAQ++ L LSV    ++ L N   +
Sbjct: 120 LHIGHARGAIFGDTLARVGRHLGYDVQTEYYINDAGAQMDMLGLSVSLAGREFLLNETVE 179

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            PE YY G YL  + KE+   +  ++ N  +E     +  ++   ++KII+ DLK + I+
Sbjct: 180 YPESYYRGEYLVDIAKEIQKNFGDDIFN--DESRFREMAMFAKDEVLKIIKKDLKDIGIE 237

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D FISE+  +    S   D  + L + G +YE                  +++  RST 
Sbjct: 238 FDTFISENSLY----SSWEDTKNVLEKNGSLYE----------------KDEKVFLRSTA 277

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GDD DR +++ +G  TY A D+ Y K KY+R FD  I + G+DH GY+ R++A    + 
Sbjct: 278 HGDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRNFDRYINIWGADHHGYITRVKAAIEFLG 337

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
              +++ ++L ++V+L + G P KMSKR G+FI +  + +E+G+D++RF+ L RK+   L
Sbjct: 338 NDSSKLEIILSQMVQLLKGGEPYKMSKRKGNFILMSDISEEIGADALRFVFLTRKSDTHL 397

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTS 494
           +FD   +K Q   NPVFY+ YA+AR   +F +A         +L P++V+ ++  + +  
Sbjct: 398 EFDLETLKNQDSSNPVFYINYAHARINQVFVKA---------NLTPKDVLNEKFGDLNED 448

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
            + LI      P VI  A   ++  K+  YLY+LAS  H  ++  +             +
Sbjct: 449 SINLIYEALLLPTVISEAFEKRDMQKITDYLYNLASSVHKFYNEHKIL---------ETQ 499

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                L+++  V+  I +GL ++G+E+   M
Sbjct: 500 EQNSYLKVLSVVSLSIRTGLKLLGIEAKEVM 530


>gi|229817124|ref|ZP_04447406.1| hypothetical protein BIFANG_02382 [Bifidobacterium angulatum DSM
           20098]
 gi|229784913|gb|EEP21027.1| hypothetical protein BIFANG_02382 [Bifidobacterium angulatum DSM
           20098]
          Length = 596

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 180/622 (28%), Positives = 302/622 (48%), Gaps = 74/622 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
            S  + N + ++  + K      D      +  + RP+D AHG  ++NAAM L++  G+ 
Sbjct: 6   LSELIFNIVNDLVNEGKAGTLTADLIPPQAKFAVMRPKDRAHGDWASNAAMQLAKKAGMK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AEL  A +     + SV +AG GFIN+ L  +    ++ +++ +G  YG+N    G
Sbjct: 66  PRDFAELFAAELVKADGIKSVEVAGPGFINIVLDSASAAAVVDAVLEAGSAYGKNDHLGG 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+G  R A VGD++A ++  +G +V REYY ND G QIN  A S
Sbjct: 126 ETLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------EL 221
           +               P   Y G Y+  + + + D+ ++                   E 
Sbjct: 186 LVAAAH------GETTPIDGYKGAYIDEIAQRVIDEATADGVDILNLPRVDGGSDENGEP 239

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L   + +     +  +V  M   I+  +K   +  D++  E+  +      +   I +L 
Sbjct: 240 LGEGDSEQREEFRKRAVPMMFDEIQKSMKNFRVNFDVWFHENSLY--SDGEVDKAIADLR 297

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G ++E                      F ST  GDD DR ++KSDG+Y YFAAD+AY+
Sbjct: 298 ERGDIFE----------------KDGATWFASTKHGDDKDRVIIKSDGNYAYFAADIAYY 341

Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397
           + K  R     D  IY++G+DH GY+ R+ A+  A  +K  + + +L+ +LV + +DG  
Sbjct: 342 RNKRHREVNPADVAIYMLGADHHGYIGRMMAMCEAFGDKPGENMQILIGQLVNVMKDGKA 401

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG+ +T+  + D +G D+ R+ +     +  +D D   +   S ENPV+YVQYA
Sbjct: 402 VRMSKRAGNVVTIDDLTDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNENPVYYVQYA 461

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A       +         P + E        +  LA++P ++  A   + 
Sbjct: 462 HARSCNVDRNAATAGITYEGADLSLLDTPADGEV-------LAALAQWPALLREAGDLRA 514

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMR-------------LQLV 563
           P+++A YL DLA+ +H  ++  R  P  L   +A   +   +R             L+L 
Sbjct: 515 PHRVAHYLEDLAATYHKWYNVERVVPMELTDPEARGEEAEALRIAKAPEPARAAARLKLN 574

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV ++I  GL+++G  +P +M
Sbjct: 575 DAVKTVIAEGLDLLGCAAPEKM 596


>gi|254796447|ref|YP_003081283.1| arginyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589683|gb|ACT69045.1| arginyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 570

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 211/589 (35%), Positives = 325/589 (55%), Gaps = 23/589 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF    + L   +  I      E+  L        +   +G  ST  + +L++ +GL 
Sbjct: 1   MDLFLRLGNVLTEVVTSIFDVTLNEQASL----WSSSKKREYGDFSTAISFLLAKKVGLS 56

Query: 61  PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
              +A  I   ++       +V +A  GF+N++L+     + L+++      YG + IG 
Sbjct: 57  LHEVASSIAGGLRSFKDLFKNVSVASGGFVNVFLTSDTWSEFLAAVSDDASGYGFSDIGH 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  +N+EFVSANPTGP+H+GH R A++ D  A L+   G+ +TREYYINDAG QI+ L  
Sbjct: 117 GVPLNLEFVSANPTGPLHLGHIRGAIIFDIFAELLDKFGFSLTREYYINDAGKQIDLLVY 176

Query: 180 SVFWRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-PIVKDYS 237
           SVF R+ + L   +SD  P   Y G Y+K +   L   +   + +  E K      ++  
Sbjct: 177 SVFVRFCEQLQGKESDNFPNSCYAGEYIKDIASYLISTFPDSVKDTTELKSFSDTFREVI 236

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +   M +I+ DL  L + +D ++ E + H+G+   +  +I  L  +GY+ E  LP PK K
Sbjct: 237 LSLTMDMIKSDLAKLGVSYDCYVREKELHKGNY--VEKVIAVLDEKGYLGEEELPSPKGK 294

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           +    +  RKQ +F S   GDD +R L K DGS+TYFA+D+AY   K ERGF++MI  +G
Sbjct: 295 SGDWVE--RKQKVFLSKKFGDDTNRALQKVDGSWTYFASDVAYHYHKLERGFNHMIVGLG 352

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +DH+GYVKRL  V  A+S   A+I++ L  LV L+++G P+K+SKR GD ITL  V++  
Sbjct: 353 ADHAGYVKRLFGVVEALSGGDARIDIKLYNLVNLFKNGKPVKLSKRNGDLITLDDVLESG 412

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +  + +RF ML + +  +LDFD  K    S +NP+FYVQYA+ARC S+ R+ ++     D
Sbjct: 413 ITVNEIRFAMLTKSSEIVLDFDLDKFVSTSYDNPLFYVQYAHARCCSLLRK-REPSAKCD 471

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             +   N+          EL L+V LA+ P ++E   ++ E +KL FYL ++A  FH  W
Sbjct: 472 AAMLVENL----------ELDLMVTLAKLPSLLEMIIVSGEVHKLTFYLQEVAERFHSLW 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G    +LRF+  +   LT  RL LV AV + + S L ++ +E    M
Sbjct: 522 NAGMTQNKLRFIIEDEPGLTNARLTLVKAVKNTLASVLKVLKIEPAERM 570


>gi|150021371|ref|YP_001306725.1| arginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793892|gb|ABR31340.1| arginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 543

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 178/575 (30%), Positives = 285/575 (49%), Gaps = 33/575 (5%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++  + E    I  E+       IE P D   G  STN A+I ++     P  +A+L   
Sbjct: 2   IRELIDERLRSILAEEGFNYNYNIEIP-DEKFGDYSTNVALIGAKYFKKPPREVAKLFQE 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           +++ DP    V IAG GFIN  +S S    IL  ++     Y + L  K  K+ +E+ SA
Sbjct: 61  KLQSDPLFSEVSIAGPGFINFRISKSVYVSILGKMIKKKENYWK-LPQKSIKIQLEYGSA 119

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTGP  VGH R  V+GD L +++ F GYEV +E Y+NDAG QI  LA S++ RY + L+
Sbjct: 120 NPTGPFTVGHGRQLVIGDVLGNVLRFLGYEVDKEMYLNDAGRQIRLLAKSLWVRYNE-LF 178

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
               DLPE  Y G YL  + K+L  +   + ++   E         +V  ++  +   L 
Sbjct: 179 GKKYDLPEDGYKGSYLIDIAKKLVKEIEDKYVDVWNENVEKFFMQQAVANILSDMEQTLS 238

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            ++ + +  I E    +     +  ++  L  +  VYE                  + L 
Sbjct: 239 MIDCKFNNKIRESFVIQL--GYVDKVLKILKEKDLVYE----------------KDQALW 280

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           F+ +    + D+ L++ DG+YTYF  D+AY   K+ER +D +  + GSDH G++ R++A 
Sbjct: 281 FKVSEFIGENDKVLIRRDGTYTYFLTDIAYHLYKFERKYDKVYDIFGSDHHGHIPRMKAA 340

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            +A+   +  +N +L + V L +    +KMS RAG+FITL  +V EVG D  R+  +   
Sbjct: 341 MSALDIDEEFLNFILHQFVTLKKSNEIVKMSTRAGNFITLEELVKEVGKDPTRYFFVMND 400

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            +  L FD    K +S ENPV+YVQYAYAR +SIF +A +     DF      +   +  
Sbjct: 401 INTHLVFDLDLAKSKSNENPVYYVQYAYARIKSIFEKAGEKGIKGDF------LENIDLL 454

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  E+ +I  L E+   ++       P+ L  Y+Y L+  FH +++      + + V  
Sbjct: 455 ENDEEMGIIKLLDEFVNSLKQVEEKLSPHFLTNYIYALSEKFHSYYA------KYKIVDE 508

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N  +++ RL L+  V  I      ++G+E+P  M
Sbjct: 509 ENISVSLARLGLLSVVKEIYKIVFKLLGIEAPERM 543


>gi|313631877|gb|EFR99036.1| arginyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 441

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 171/472 (36%), Positives = 265/472 (56%), Gaps = 31/472 (6%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           ++  GKG K  IEFVSANPTG +H+GH R A +GD+LA++M  +G+ V+REYYINDAG Q
Sbjct: 1   KSDFGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGFNVSREYYINDAGNQ 60

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           IN L LS   RY +AL   +S+ PE  Y G  +  +GK+LA KY  + +N  EE+   + 
Sbjct: 61  INNLVLSAEARYFEAL-GLESNFPEDGYRGADIISLGKDLAAKYGDKYVNTSEEERRSVF 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +  ++      +R DL+   +  D + SE   +  + + +   ++ L   GY+YE     
Sbjct: 120 RVDALDFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE----- 172

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                             R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I
Sbjct: 173 -----------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLI 221

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DH GY+ R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +
Sbjct: 222 DIWGADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDL 281

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++EVG D+ R+    R +   ++FD    K  S +NPV+YVQYA+AR  SI R  K+   
Sbjct: 282 IEEVGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNL 341

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D+  +    +++  E+E+D     L+  L E+  V+  A + + P+++  YL DLA+ FH
Sbjct: 342 DVSKE-ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFH 395

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++        + +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 396 RFYNSN------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 441


>gi|86609400|ref|YP_478162.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109895046|sp|Q2JK96|SYR_SYNJB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86557942|gb|ABD02899.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 598

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 169/599 (28%), Positives = 303/599 (50%), Gaps = 34/599 (5%)

Query: 7   FSSRLKNYLKEIDCKIKV-----EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            ++ +   ++      ++     ++      VI+ P D  +G  +    + +++   L P
Sbjct: 14  LTAAVAESIRRASEAGQLGSLAPQQATAIAPVIQIPSDPRYGDYACPTPLGMAKLCRLAP 73

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA+ +   + +        +AG G++N  L   +L K L  ++  G  +G+  I    
Sbjct: 74  AQIAQTLQKHLDLPDI--ETQVAGGGYLNFRLGDPFLAKRLQELLHLGENFGKTAIPHPE 131

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +EFVSANPTGP+HVGH R A VG TLA+L+ ++G++V RE+YINDAG Q+  L  S+
Sbjct: 132 RILLEFVSANPTGPLHVGHGRWAAVGSTLANLLHWTGHQVEREFYINDAGNQMRLLGQSL 191

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R +Q L   +  LPE  Y G YL  + + L  +  + +   P    L    D++   M
Sbjct: 192 EVRVRQ-LQGEEVALPEDAYHGSYLVDIARRLLGQVKAGIRPLPTT--LEEYTDFAYGEM 248

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP----SPIRDIIDNLARQGYVYEGILPPPKSK 297
           +   +  L+ L  + D + SE   H  DP    S I+  +  L  +G++Y+   P  +  
Sbjct: 249 LAWQKQTLQQLRTEFDHWFSERRLHTPDPQTGLSAIQQALQELQERGFLYKAKAPRGEDP 308

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                    + + F++   GDD DR + K+DGS+TY AAD+AY + K +RG+  +I ++G
Sbjct: 309 KPGA----EEAVYFKTQEFGDDKDRVVQKADGSFTYLAADIAYHRDKVQRGYHRLINILG 364

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR------DGMPIKMSKRAGDFITLR 411
           SDH GY+ RL+A   A S    ++ +L+ + V+L++      +   ++MSKR G+F++L 
Sbjct: 365 SDHHGYIGRLKAAVGAFSPD-VKLEILIGQFVKLFKTDPQTGEKTEVRMSKRTGNFVSLN 423

Query: 412 HVVDE----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
            ++++    VG D+ R+ +L       ++FD     +Q+ +NPV YV Y++ARC ++ R+
Sbjct: 424 DLIEDPEIGVGVDAARWFLLSSSMDSPINFDLDLAVKQTFDNPVVYVHYSHARCCTLLRR 483

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            ++       +  P     +    +  E  L++ L   P  +  A   + P+K+  Y   
Sbjct: 484 LQEEEKVELTNKVPLTEQQKLPYKEPEERALLLRLLALPDELIAAAEERAPHKIIRYAEA 543

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NIIGVESPNEM 585
           +A+ F+  + + R  P L+     +  L   R+QLV A   ++ + L  I+G+ +P  M
Sbjct: 544 IAADFNKFYDNCRILPLLK----EDPLLAQARIQLVQATQQVLFNVLTGILGLSAPESM 598


>gi|148377750|ref|YP_001256626.1| arginyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291796|emb|CAL59186.1| Arginyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 539

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 201/589 (34%), Positives = 300/589 (50%), Gaps = 54/589 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D   +L++ LKEI   + + + +             HG L+TN A+     L  +
Sbjct: 1   MN-KLDLKEKLESKLKEIASSLGITRSVF------LTESKKHGDLTTNMALGN---LNTN 50

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P+ +A  IV+ I ++      + +A  GFIN  +   YL   ++ I+     YG+    K
Sbjct: 51  PMELANQIVSMINLEEFGIKNISVANPGFINFSIGDDYLVSCVNQILKLDKNYGKGN--K 108

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA 
Sbjct: 109 VGKVNVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVVREYYINDAGNQINVLAN 168

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           S++ RY+Q  Y +D  +PE  Y G  +    ++   KY  +  N+  + + L +VK+ ++
Sbjct: 169 SLWSRYKQIFY-SDYSMPEESYKGEDIVWGAQKFYAKYGDKFKNYELDNELLELVKNEAI 227

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M  I++DL    +  D + SE   +  D   I++ I NL      YE          
Sbjct: 228 SIFMTKIQEDLANFGVWFDNYFSEKSLYENDEVKIKETIKNLK---NAYEN--------- 275

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVM 356
                     L  ++T+ GDD DR L+KSDGSYTYF  D+ Y + KY+R G D  +I V 
Sbjct: 276 -------DGALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYKRMGADATIINVW 328

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DHSGYVKR++     +   +  + VL  +LVRL ++G   KMSKR G    L   V  
Sbjct: 329 GADHSGYVKRMQCAVKDLGLNEQNLVVLCMQLVRLVKNGEEFKMSKRKGTSFFLNEFVKM 388

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG DS RF++L R  +  LDFD      QS +NP   VQYA ARC S+ ++A       +
Sbjct: 389 VGKDSARFLLLDRTLNSKLDFDIDLATSQSNDNPAILVQYANARCHSLIKKA-------N 441

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D         + + D S   LI  L E+P V+E +      + L  YL  LA  F+  +
Sbjct: 442 IDSNNLYATSFDKQSDNS---LITTLLEFPSVVEKSADKYATHLLTQYLVKLAKEFNSWY 498

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++       + + + N    + ++ LV AV+  I +GL ++ V +P  M
Sbjct: 499 TNSP-----KLIGSENE---ISKIALVKAVSITIENGLKLLEVSAPVSM 539


>gi|291320435|ref|YP_003515699.1| arginyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752770|emb|CBH40745.1| Arginyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 539

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 198/589 (33%), Positives = 300/589 (50%), Gaps = 54/589 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D   +L++ LKEI   + + + +             HG L+TN A+  +    + 
Sbjct: 1   MN-KLDLKEKLESKLKEIASSLGITRSVF------LTESKKHGDLTTNMALGNA---NIK 50

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P+ +A  IV+ I ++      + +A  GFIN  +   YL   ++ I+  G  YG+    K
Sbjct: 51  PMELANQIVSMINLEEFGIKNISVANPGFINFSIGDDYLVSGVNQILKLGKNYGKGN--K 108

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA 
Sbjct: 109 VGKVNVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVVREYYINDAGNQINVLAN 168

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           S++ RY+Q  Y  D  +PE  Y G  +    ++   K+  +  N   +++ L +VK+ ++
Sbjct: 169 SLWSRYKQIFYP-DYSMPEESYKGEDIVWGAQKFYAKFGDKFKNNELDKELLELVKNEAI 227

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M  I++DL    +  D + SE   +  D   I++ I +L                  
Sbjct: 228 SIFMSKIQEDLANFGVWFDNYFSEKSLYENDEVKIKETIKSLK----------------- 270

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVM 356
                 +   L  ++T+ GDD DR L+KSDGSYTYF  D+ Y + KY+R G D  +I V 
Sbjct: 271 --NAYDNDGALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYKRMGADATIINVW 328

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DHSGYVKR++     +   +  + VL  +LVRL ++G   KMSKR G    L   V  
Sbjct: 329 GADHSGYVKRMQCAVKDLGLNEQNLVVLCMQLVRLVKNGEEFKMSKRKGTSFFLNEFVKM 388

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG DS RF++L R  +  LDFD      Q+ +NP   VQYA ARC S+ R+A       +
Sbjct: 389 VGKDSARFLLLDRTLNSKLDFDINLATSQNNDNPAILVQYANARCHSLIRKA-------N 441

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D      I  + + D S   LI  L E+P V+E +      + L  YL  LA  F+  +
Sbjct: 442 IDSNNLYAISFDKQSDNS---LITTLLEFPSVVEKSADKYATHLLTQYLVKLAKEFNSWY 498

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++       + + + N    + ++ LV AV+  I +GL ++ V +P  M
Sbjct: 499 TNSP-----KLIGSENE---ISKIALVKAVSITIENGLKLLEVSAPVSM 539


>gi|88608193|ref|YP_505950.1| arginyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|109895008|sp|Q2GEZ6|SYR_NEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88600362|gb|ABD45830.1| arginyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 570

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 212/589 (35%), Positives = 322/589 (54%), Gaps = 23/589 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF     RL N L E+   I         ++   P+   +G  ST  + ++++ + L 
Sbjct: 1   MDLFL----RLGNVLTEVVTSIFGVTLSEQVLLWNSPKKREYGDFSTAISFLIAKEVRLS 56

Query: 61  PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
              +A  I   ++       +V +A  GFIN++L+     + L+++      YG + IG 
Sbjct: 57  LHEVACSIADGLRSFKDLFKNVSVASGGFINVFLTSDTWSEFLAAVSDDAGGYGFSDIGH 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              +N+EFVSANPTGP+H+GH R AV+ D  A L+   G+ +TREYYINDAG QI+ L  
Sbjct: 117 AVPLNLEFVSANPTGPLHLGHIRGAVLFDIFAELLDKFGFSLTREYYINDAGKQIDLLVY 176

Query: 180 SVFWRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-PIVKDYS 237
           SVF R+ + L   +SD  P   Y G Y++ +   L   +   + +  E K      ++  
Sbjct: 177 SVFVRFCEQLRKKESDNFPSNCYAGDYIRDIASYLISTFPDSVKDTTELKSFSDTFREVI 236

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +   M +I+ DL  L I +D ++ E + H G+   I  +I  L  +GY+ E  LP PK K
Sbjct: 237 LSLTMDMIKSDLAKLGISYDCYVREKELHEGNY--IEKVIAVLDEKGYLDEEELPSPKGK 294

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           +    +  R+Q +F ST  GDD +R L K DGS+TYFA+D+AY   K ERGF++MI  +G
Sbjct: 295 SGDWVE--RRQKVFLSTKFGDDTNRALQKVDGSWTYFASDVAYHYHKLERGFNHMIVGLG 352

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +DH+GYVKRL  V  A+S   A+I++ L  LV L+R+G P+K+SKR GD ITL  V++  
Sbjct: 353 ADHAGYVKRLSGVVEALSGGDARIDIKLYNLVNLFRNGKPVKLSKRNGDLITLDDVLESG 412

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +    +RF ML + +  +LDFD  K    S +NP+FYVQYA+ARC S+ R+         
Sbjct: 413 ITVSEIRFAMLTKSSEIVLDFDLDKFVRASYDNPLFYVQYAHARCSSLLRKRG------- 465

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P          +  EL L+V LA+ P +++   ++ E +KL FYL+++A  FH  W
Sbjct: 466 ----PSAKCDAAMLVEKQELDLMVTLAKLPSLLKVIVVSGEVHKLTFYLHEVAERFHALW 521

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + G    + RF+  +  +LT  RL LV AV + + S L ++ +E    M
Sbjct: 522 NAGMIENKFRFIIEDEPELTNARLILVKAVKNTLASVLKVMKIEPAERM 570


>gi|224372504|ref|YP_002606876.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782978|sp|B9L8B8|SYR_NAUPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|223588954|gb|ACM92690.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 532

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 165/556 (29%), Positives = 289/556 (51%), Gaps = 46/556 (8%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + +P++   GH +       ++    +P   A  +   +    + + V  A  GF+N+ L
Sbjct: 19  LSKPKNKDFGHFAVPI-FKYAKMNKQNPQEFAAALCDALGNCEEFEKVE-AVSGFVNITL 76

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S S+L +  + ++     + +       ++ +E++SANPTGP+H+GH R AV GD +A +
Sbjct: 77  SDSFLNEFANKVLSEKENFAKGS--GKERILLEYISANPTGPLHIGHARGAVFGDAIARI 134

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V  EYY+NDAG QI  L LSV+   ++ L   D   PE YY G Y+K +  E 
Sbjct: 135 GRHIGYDVVTEYYVNDAGRQITLLGLSVYLAAREIL-GLDVKWPEEYYRGEYIKDLAAEA 193

Query: 214 ADKYSSELLNFPEEKWL---PIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD 269
             ++  +      +        +  ++   M+ +I++D+KALN+   D ++SE + ++  
Sbjct: 194 IKEFGEDYFKAEIDAENFNDDKLNMWAKDKMLNLIKEDIKALNVTPFDNWVSEKELYKHW 253

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
                ++   L + G +YE                   ++  +S+   D+ DR +++ DG
Sbjct: 254 ----DEVRAILEKNGALYE----------------KDGKVWLKSSEYKDEKDRVVVREDG 293

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             TY A D+ Y   K++R +D  I + G+DH GY+ R++A    +     ++ +LL ++V
Sbjct: 294 RPTYLAGDIIYHWDKFKRNYDRYINIWGADHHGYIARVKAAIKFLGFDPEKLEILLSQMV 353

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +L + G P KMSKRAG+FI +  VV +VG+D++RF+ L +K    L+FD  ++  Q   N
Sbjct: 354 KLLKGGEPYKMSKRAGNFILVSDVVKDVGADALRFVFLTKKADTHLEFDVDELNRQDSSN 413

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P +Y+ YA+AR +SIFR  +    D         V  Q  +    E  L+    ++P V+
Sbjct: 414 PAYYINYAHARIKSIFRNKEMNLED--------TVNIQLKDLSKDEKDLVFLALQFPYVL 465

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A I +EP++L  YLY+LAS FH  ++        + + +   ++   RL+++  VASI
Sbjct: 466 EEAFINREPHRLTNYLYELASEFHSFYNKN------KVIGSEKEEV---RLKILAVVASI 516

Query: 570 INSGLNIIGVESPNEM 585
           I  GL+++G+E+   M
Sbjct: 517 IKLGLSLLGIEAKERM 532


>gi|215426612|ref|ZP_03424531.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289749845|ref|ZP_06509223.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T92]
 gi|289690432|gb|EFD57861.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T92]
          Length = 460

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 171/495 (34%), Positives = 253/495 (51%), Gaps = 35/495 (7%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + L  +   K+++S++ +G  YG +L+  G KVN+EFVSANPTGP+H+G  R A VGD L
Sbjct: 1   MRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKVNLEFVSANPTGPIHIGGTRWAAVGDAL 60

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             L+   G +V REYY ND GAQI+  A S+    +          P+  Y G Y+ ++ 
Sbjct: 61  GRLLTTQGADVVREYYFNDHGAQIDRFANSLIAAAK------GEPTPQDGYAGSYITNIA 114

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +++  K     L+ P+ +     +   V  M   I+  L       D++  ED  H G  
Sbjct: 115 EQVLQKAPDA-LSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDSMHTG-- 171

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + + I  L   G +YE                       R++  GDD DR ++KSDG 
Sbjct: 172 GRVENAIARLRETGNIYE----------------KDGATWLRTSAFGDDKDRVVIKSDGK 215

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y A DLAY+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V 
Sbjct: 216 PAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMVN 275

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RDG P++MSKRAG  +TL  +V+ +G D+ R+ ++       +D D       S ENP
Sbjct: 276 LVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSSASNENP 335

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V+YVQYA+AR  ++ R A ++    D +         E      E  L+  L E+PRV+E
Sbjct: 336 VYYVQYAHARLSALARNAAELALIPDTNHL-------ELLNHDKEGTLLRTLGEFPRVLE 388

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   +EP+++  YL DLA  +H  +   R  P+          L   RL L  A   +I
Sbjct: 389 TAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQG---DEQPTDLHTARLALCQATRQVI 445

Query: 571 NSGLNIIGVESPNEM 585
            +GL IIGV +P  M
Sbjct: 446 ANGLAIIGVTAPERM 460


>gi|119358466|ref|YP_913110.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166232775|sp|A1BJV9|SYR_CHLPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119355815|gb|ABL66686.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 551

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 181/589 (30%), Positives = 299/589 (50%), Gaps = 42/589 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M+ F  F   +KN L  +             ++IERP D   G  STN A ++++    +
Sbjct: 1   MHDF--FLPVIKNALLSLAVSSDKP------VLIERPADKKFGDFSTNIAFLIAKESRRN 52

Query: 61  PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P   A  ++A +   PD + S+ +AG GFIN +L+P+++ + +  I++ G  YGR+ +GK
Sbjct: 53  PKEFAGELIAHLSFPPDTIKSMTVAGPGFINFFLTPTFIMQSVEQILLEGKGYGRSCLGK 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K  +E+VSANPTGP+ +G  R  V+GD +A+L+    Y VTREYY NDAG Q+  L  
Sbjct: 113 GKKAIVEYVSANPTGPLTIGRGRGGVLGDCIANLLETQSYAVTREYYFNDAGRQMQILGE 172

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           SV +RY +     ++  PE +Y G Y++ + + L   + + L    +   LP +K  +  
Sbjct: 173 SVRFRYLELCGVAET-FPETHYQGAYIREIAESLFAGHGAALQGVHD--LLPFIKS-AET 228

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKS 296
            + K I++ L+ + I+HD F +E   +  +    S   ++ID L  + ++ E        
Sbjct: 229 IIFKSIKNTLERIGIRHDSFFNEHTLYHREGSGQSANEEVIDLLREKQFIGEY------- 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                         F ++ +G + D+ L+KS G  +Y   D+AY   K++RG+D M+ V 
Sbjct: 282 ---------DGATWFLTSRIGQEKDKVLIKSSGEPSYRLPDIAYHITKFKRGYDLMVNVF 332

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH      +      +    ++I V + + V    DG  +KMS R G+   L  +VD+
Sbjct: 333 GADHIDEYPDVLEALKILGYDASRIQVAINQFVTTTVDGQSVKMSTRKGNADLLDDLVDD 392

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG D+ R   + R     L+FD    K+QSK+NPVFY+ YA+AR  S+ R A     +  
Sbjct: 393 VGPDATRLFFIMRSKDSHLNFDIDLAKKQSKDNPVFYLHYAHARICSLLRMAA---LENG 449

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           FD         +      EL+L + L EYP++I  +    EP K+  YL+ +A ++H  +
Sbjct: 450 FDPDGSGHHLLQLLDSEPELRLGLLLLEYPQMITASIRLLEPQKMVDYLHSVAELYHKFY 509

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +E P L+        ++  RL L  A   ++ +G  I+G+ +P  M
Sbjct: 510 ---QECPILK----AEPDISKARLFLSLATKQVLCNGFRILGISAPESM 551


>gi|218662749|ref|ZP_03518679.1| arginyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 401

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 227/402 (56%), Positives = 304/402 (75%), Gaps = 2/402 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+S++ SGI+YGR+ +G+
Sbjct: 61  NPRALADIIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIASGIDYGRSTLGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+  A 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVFAP 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               RY++AL     ++P G YPG YL  VG+ LA  Y   L N PEE+W+PIVKD ++ 
Sbjct: 181 LGLLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTIS 240

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AMM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  
Sbjct: 241 AMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D
Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           H GYVKRLEAVA  VS+ KA++ VLLC+LV+LYR+G P+KMS
Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMS 401


>gi|313678427|ref|YP_004056167.1| arginine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950101|gb|ADR24696.1| arginine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 539

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 200/589 (33%), Positives = 298/589 (50%), Gaps = 54/589 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D   +L+N L+EI   + +++ +             HG LSTN A+  S    L+
Sbjct: 1   MN-KLDLKEKLENKLREIASDLGIQRNVF------LTESKKHGDLSTNMALGNS---NLN 50

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P+ +A  I++ I         + +A  GFIN  +   YL   ++ I+  G  YG+    K
Sbjct: 51  PMELARKIISMIDAGEFGIKNMTVANPGFINFSIGDDYLVSGVNQILHLGSNYGKGN--K 108

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KVN+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA 
Sbjct: 109 LGKVNVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVNREYYINDAGNQINVLAN 168

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSV 238
           S++ RY+Q  Y  D  +PE  Y G  +    ++  +KY  +  +   + + + +VK+ ++
Sbjct: 169 SLWARYKQIFYP-DFQMPEESYKGEDIIWGAQKFYEKYKDKYKDCELDTELIKLVKEEAI 227

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              M  I++DL    ++ D + SE   +  D + I++ I NL                  
Sbjct: 228 SIFMAKIQEDLANFGVKFDTYFSEKSLYENDGAKIKETIKNLK----------------- 270

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVM 356
                     L  ++T+ GDD DR L+KSDGSYTYF  D+ Y + KY R G D  +I V 
Sbjct: 271 --NAYESDGALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYRRMGKDATIINVW 328

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DHSGYVKR++     +      + VL  +LVRL ++G   KMSKR G    L   V  
Sbjct: 329 GADHSGYVKRMQCAVRDLGLNDNNLVVLCMQLVRLIKNGEEFKMSKRKGTSFFLSEFVKM 388

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG DS RF++L R  +  LDFD      QS +NP   VQYA ARC S+ ++A        
Sbjct: 389 VGKDSARFLLLDRTLNSKLDFDIDLATSQSNDNPAILVQYANARCHSLIKKA-------S 441

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D    + I  + + D     LI  L E+P VIE +      + L  YL  LA  F+  +
Sbjct: 442 VDTSNLSAISYDKQSDN---NLITKLLEFPLVIEKSADKYATHLLTQYLVKLAKEFNSWY 498

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++       + + ++N      ++ LV AV+  I +GL ++ V +P  M
Sbjct: 499 TNSP-----KLIGSDNE---QSQIALVKAVSITIENGLKLLEVSAPTSM 539


>gi|225620694|ref|YP_002721952.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1]
 gi|254782945|sp|C0R2B0|SYR_BRAHW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225215514|gb|ACN84248.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1]
          Length = 534

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 188/579 (32%), Positives = 288/579 (49%), Gaps = 59/579 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S+ LK  LKE      V K I   I I    D   G  +   AM L++ L  +PL IA 
Sbjct: 11  ISNILKEALKEYLKDTDV-KDIESYIEIGYAVDDKFGDYACPVAMRLAKVLKKNPLEIAN 69

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I  +I      D + +A  GFINL LS +Y+ + ++  +++  +YG+N +    K+ +E
Sbjct: 70  SITEKIDKK-YFDKIEVAKPGFINLTLSYNYINECIND-LINNDDYGKNTVEDKKKILVE 127

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +G  L++++ ++G+EV +E+Y+NDAG QI  L  SV     
Sbjct: 128 YVSANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESVKA--- 184

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                   ++PE  Y G Y+K V K+                            +++  +
Sbjct: 185 ---VQEGREIPEDGYHGEYIKDVAKQ---------------------DGVPKDIILESQK 220

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L+      D + SE      +   +   +D L ++G ++E                + 
Sbjct: 221 KLLERFGTHMDNYASE--LKIREGGELEKTMDFLDKEGLLFE----------------ED 262

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + F+ST  GDD DR + KS+G+YTYFA D+ Y K K +RG+  +I ++G+DH GYV R
Sbjct: 263 NAVWFKSTKYGDDKDRVVKKSNGTYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPR 322

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   AVS+  A + V+L +LVRLYR    ++MSKR GD I+L  V+DE+G D  R+ +
Sbjct: 323 ITAAVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFL 382

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R  S  LDFD    K++  +NPV+YVQYAYAR  +IF + ++     D        + 
Sbjct: 383 LMRSYSSSLDFDLELAKKKDNDNPVYYVQYAYARICNIFFKLEEKNMSYD----DNKPLD 438

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                + S L+L   +  +P  I  A  + E Y L  Y Y++AS  H  +          
Sbjct: 439 ISKIANESSLKLAKMILRFPDEIYEAAKSLEVYTLINYTYEIASALHRFYYDN------- 491

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N ++   RL L+ AV  I+    +IIG+     M
Sbjct: 492 IVLEENAEIRQERLTLIKAVKKILGLCFDIIGISKVERM 530


>gi|34556632|ref|NP_906447.1| arginyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833211|sp|Q7MAK6|SYR_WOLSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34482346|emb|CAE09347.1| ARGINYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 528

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 163/566 (28%), Positives = 284/566 (50%), Gaps = 42/566 (7%)

Query: 20  CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
            K  +E  +   +V+E+P+D  HGH +T AA  L++ L  +P  IA+ +  ++      +
Sbjct: 5   IKHLLETTLGFSVVLEKPKDKNHGHYATPAAFSLAKELKKNPALIAQELSKKLSEIEVFE 64

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           SV   G G+IN  L   +L    S  +  G E+G+    K   + +E+VSANPTGP+H+G
Sbjct: 65  SVQSVG-GYINFRLKQGFLDAQASLALSQGREFGKGD--KQGSILLEYVSANPTGPLHIG 121

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV+GD L+ +    GY +  EYY+NDAG QI+ L LS++   + +L +     PE 
Sbjct: 122 HARGAVLGDALSRIGRHLGYALETEYYVNDAGNQIHLLGLSIYLAGRDSLLSLPVTYPEQ 181

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           YY G Y+  + KE   K+      F +E ++P +  +  + M++ IR +L   +I  D +
Sbjct: 182 YYRGEYIVDIAKEALKKWGE--KAFADEAFIPELSLFGKELMLEEIRSNLADTHIHFDHY 239

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           +SE   +                              ++ Q C     ++  RS+  GD+
Sbjct: 240 VSEKSLYPRWEETY--------------------ALLQSHQGCYEGGGKVWLRSSAHGDE 279

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR +++  G  TY A D+ Y   K+ R +D  I + G+DH GY+ R++A    +    +
Sbjct: 280 KDRVIVRESGEPTYLAGDIIYHADKFARPYDRYINIWGADHHGYIARVKAAIEFLGHDSS 339

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ VLL ++V L + G P KMSKRAG+FI +R V++++G+D++RF+ L +K    L+FD 
Sbjct: 340 KLEVLLSQMVTLLKGGQPYKMSKRAGNFILMRDVLEDIGADALRFIFLSKKPDTHLEFDV 399

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             + ++   NP+FY+ YA+AR  ++  ++     +++               + S   L+
Sbjct: 400 DDLNKEDSSNPIFYINYAHARIHTMLGKSSLDSQEIEAASLEG--------LEDSIFDLL 451

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
               + P+V+E++   +   K+A YL  LA  FH  ++  +                   
Sbjct: 452 FLSLQLPQVLEDSFENRAIQKVAEYLRALAGEFHKFYNEHKIL---------ETPQEAAL 502

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L++   VA  ++ GL ++G+ +   M
Sbjct: 503 LKVCKVVALSLSQGLALLGITAKERM 528


>gi|152991237|ref|YP_001356959.1| arginyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166232815|sp|A6Q543|SYR_NITSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151423098|dbj|BAF70602.1| arginyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 527

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 175/565 (30%), Positives = 298/565 (52%), Gaps = 43/565 (7%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           + ++ K     I++E+PRD   GH +T  A  L++ L   P+ IA+ +    +     + 
Sbjct: 6   QSELSKLSDKSIILEKPRDRQFGHYATPIAFSLAKELRRSPMQIADELAKSFESSSIFEK 65

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V    KG++N  LS S+L +  +  + +  E+G++   +G  + +EFVSANPTGP+H+GH
Sbjct: 66  VE-PIKGYVNFKLSESFLDEYATWALKNESEFGKDE--QGETILLEFVSANPTGPLHIGH 122

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV+G+ L+ L    G E+ +EYYINDAG QI  L LS++   ++ L   +   P+ Y
Sbjct: 123 ARGAVLGEALSRLGKHLGNEIVKEYYINDAGNQIYLLGLSIYLAAKEEL-GQEVQWPQEY 181

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+K + KE  +++  E   F +E  +  + ++  + MM++I  +L A++I+ D F+
Sbjct: 182 YRGDYIKDLAKEAIEEFGKE--AFSDESLIDKLSEWGKEKMMELIVSNLAAVDIKFDHFV 239

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   +        ++   L     VYE                   ++  +S+  GD+ 
Sbjct: 240 SEKALYE----KWDEVFAILKEHDAVYE----------------KDSKVWLKSSEYGDEK 279

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR +++ DG  TY A D+ Y   K++RGFD  I + G+DH GY+ R++A    +     +
Sbjct: 280 DRVVVREDGRPTYLAGDIIYHYDKFKRGFDRYINIWGADHHGYIARVKAAIKFLGFDPDK 339

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + VLL ++V L + G P KMSKRAG+FI +  VV+E+G+D+++FM L +K    L+FD  
Sbjct: 340 LEVLLAQMVSLLKGGEPYKMSKRAGNFILMSEVVEEIGADALKFMFLSKKADTHLEFDVD 399

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +K++   NPV+Y+ YA+AR  S+  +A     ++        +     + +     L+ 
Sbjct: 400 MLKKEDASNPVYYINYAHARINSVLEKAGKSAGEV--------IDTPLKDLNEDAKDLLF 451

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
                P +IE+A   +E  +L  YL  LA+ FH  ++  +       V  +  +   ++L
Sbjct: 452 EALILPEIIEDAFAKRELQRLTDYLKALAAQFHSFYNKHK-------VIGSEYEDRYLKL 504

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            LV  VA  I  GL ++G+E+   M
Sbjct: 505 FLV--VALSIRVGLRLLGIEAKKRM 527


>gi|209523094|ref|ZP_03271650.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496245|gb|EDZ96544.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 600

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 238/619 (38%), Gaps = 73/619 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L     SR +  L +       E       +I    +   G    N AM L++ L  +P 
Sbjct: 19  LIQQMRSRFETALTDAFG----ETVSGTDPLIVNSSNPKFGDYQCNVAMSLTKRLKSNPR 74

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  I+  ++ID       IAG GFINL L   YL   L++ +      G    G    
Sbjct: 75  QIASTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQLNAKLTD-PRLGIAPNGNPQN 133

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD +A ++ F G++V R  ++ D G Q   L   + 
Sbjct: 134 VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGMLITYLQ 193

Query: 183 WRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            +Y  AL   D     DL E Y          +E  +    +++              + 
Sbjct: 194 EKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGAEDS---RRAW 250

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +    R + + +  + DI ++E      +P  + +++ +L   G + E        + 
Sbjct: 251 ELLCDQSRREFQQIYDRLDIKLTERGESFYNP-MLAEVVADLEASGLLVE-------DQG 302

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            +   ++       +   GD +   + KS+G Y Y   DLA  + +    G   +IYV  
Sbjct: 303 AKCVFLEG-----FTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 357

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  + +  ++  VA  V      ++V+      L +     K+  R+G+ + LR ++DE 
Sbjct: 358 AGQANHFAQVWQVARRVGWIPDGVDVVHVPFG-LVKGEDGKKLKTRSGETVRLRDLLDEA 416

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG D+V++  L +  +    F F K+    
Sbjct: 417 VKRAQEDLETRLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYIFSFDKMLSL- 475

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAY R + I R+          D             D SEL L  HL +  
Sbjct: 476 QGNTAPYMLYAYVRIQGISRKG-------SIDFEQVGDRASIHLQDPSELTLAKHLLQLH 528

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            VI+       P +L  YL++L+  F+  +      P L+     +      RL L H  
Sbjct: 529 EVIDTVAQELLPNRLCQYLFELSQKFNQFYDRC---PVLK----ADECDRASRLALCHLT 581

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+   + M
Sbjct: 582 AETLRLGLSLLGISVLDRM 600


>gi|291571146|dbj|BAI93418.1| arginyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 585

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 239/619 (38%), Gaps = 73/619 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L     SR +  L +       E       +I    +   G    N AM L++ L  +P 
Sbjct: 4   LIQQMRSRFETALTDAFG----ETVSGTDPLIVNSSNPKFGDYQCNVAMSLTKKLKSNPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  I+  ++ID       IAG GFINL L   YL   L++ +      G        K
Sbjct: 60  QIAGTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQLNAKLTD-PRLGIAPNRDPQK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD +A ++ F G++V R  ++ D G Q   L   + 
Sbjct: 119 VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGMLISYLQ 178

Query: 183 WRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            +Y  AL   D     DL E Y          +E  +    +++              + 
Sbjct: 179 EKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGAEDS---RRAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + + +  R + + +  + DI ++E      +P  + +++ +L   G + E        + 
Sbjct: 236 ELLCEQSRREFQQIYDRLDIKLTERGESFYNP-MLAEVVADLEASGLLVE-------DQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            +   ++       +   GD +   + KS+G Y Y   DLA  + +    G   +IYV  
Sbjct: 288 AKCVFLEG-----FTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  + +  ++  VA  V      ++V+      L +     K+  R+G+ + LR ++DE 
Sbjct: 343 AGQANHFAQVWQVARRVGWIPDGVDVVHVPFG-LVKGEDGKKLKTRSGETVRLRDLLDEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG D+V++  L +  +    F F K+    
Sbjct: 402 VKRAQEDLETRLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYIFSFDKMLSL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAY R + I R+          D             D SEL L  HL +  
Sbjct: 461 QGNTAPYMLYAYVRIQGISRKG-------SIDFEQVGDRASIHLQDPSELTLAKHLLQLH 513

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            VI+       P +L  YL++L+  F+  +      P L+     +      RL L H  
Sbjct: 514 EVIDAVAQELLPNRLCQYLFELSQKFNQFYDRC---PVLK----ADECDRSSRLALCHLT 566

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+   + M
Sbjct: 567 AETLRLGLSLLGISVLDRM 585


>gi|296126409|ref|YP_003633661.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018225|gb|ADG71462.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 529

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 186/579 (32%), Positives = 289/579 (49%), Gaps = 59/579 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S+ +K  L++      V K+I   I I    D   G  +  AAM L++ L  +PL IA 
Sbjct: 6   ISNIIKTALEDYLKDTDV-KEIDSYIEIGYAADDKFGDYACPAAMRLAKVLKKNPLEIAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I  +I      + +     GFINL LS +Y+ + ++  +++   YG+N +    K+ IE
Sbjct: 65  SITEKIDKK-YFEKIEAVKPGFINLTLSYNYINECIND-LLNNDNYGKNTVEDKKKILIE 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +G  L++++ ++G+EV +E+Y+NDAG QI  L  SV     
Sbjct: 123 YVSANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESVNA--- 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                   ++PE  Y G Y+K V                       +       +++  +
Sbjct: 180 ---VKEGREIPEDGYHGEYIKEVA---------------------KLDGVPKDIILESQK 215

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L+      D + SE      +   +   +D L ++G ++E                + 
Sbjct: 216 KLLERFGTHMDNYASE--LKIREGGELEKTMDFLDKEGLLFE----------------ED 257

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + FRST  GDD DR + KS+GSYTYFA D+ Y K K +RG+  +I ++G+DH GYV R
Sbjct: 258 NAVWFRSTKYGDDKDRVVKKSNGSYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPR 317

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   AVS+  A + V+L +LVRLYR    ++MSKR GD I+L  V+DE+G D  R+ +
Sbjct: 318 ITAAVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFL 377

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R  S  LDFD    K++  +NPV+YVQYAYAR  +IF + ++     D D  P ++  
Sbjct: 378 LMRSYSSSLDFDLELAKKKDNDNPVYYVQYAYARVCNIFFKMEEKNMSYD-DAKPFDI-- 434

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                + S L+L   +  +P  +  +  + E Y L  Y Y++AS  H  +          
Sbjct: 435 -SKIANESSLKLAKIILRFPDEVYESAKSLEVYTLINYTYEIASALHKFYYDN------- 486

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V   N ++   RL LV AV  ++    +IIG+     M
Sbjct: 487 IVLEENAEIRQERLTLVKAVKKVLGLCFDIIGISKVERM 525


>gi|284051070|ref|ZP_06381280.1| arginyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 585

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 238/619 (38%), Gaps = 73/619 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L     SR +  L +       E       +I    +   G    N AM L++ L  +P 
Sbjct: 4   LIQQMRSRFETALTDAFG----ETVSGTDPLIVNSSNPKFGDYQCNVAMSLTKKLKSNPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  I+  ++ID       IAG GFINL L   YL   L++ +      G        K
Sbjct: 60  QIAGTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQLNAKLTD-PRLGIAPNRDPQK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD +A ++ F G++V R  ++ D G Q   L   + 
Sbjct: 119 VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVLRLNHVGDWGTQFGMLISYLQ 178

Query: 183 WRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            +Y  AL   D     DL E Y          +E  +    +++              + 
Sbjct: 179 EKYPSALTTADVLDIGDLVEFYRQAKKRFDEDEEFKEASREQVVRLQSGSEDS---RRAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +    R + + +  + DI ++E      +P  + +++ +L   G + E        + 
Sbjct: 236 ELLCDQSRREFQQIYDRLDIKLTERGESFYNP-MLAEVVADLEASGLLVE-------DQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            +   ++       +   GD +   + KS+G Y Y   DLA  + +    G   +IYV  
Sbjct: 288 AKCVFLEG-----FTNKEGDPLPLIVQKSNGGYNYATTDLAAVRHRINTEGATRLIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  + +  ++  VA  V      ++V+      L +     K+  R+G+ + LR ++DE 
Sbjct: 343 AGQANHFAQVWQVARRVGWIPDGVDVVHVPFG-LVKGEDGKKLKTRSGETVRLRDLLDEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG D+V++  L +  +    F F K+    
Sbjct: 402 VKRAQEDLETRLQQEGRAESPEFVHHVAEVVGIDAVKYADLSQNRTSDYIFSFDKMLSL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAY R + I R+          D             D SEL L  HL +  
Sbjct: 461 QGNTAPYMLYAYVRIQGISRKG-------SIDFEQVGDRASIHLQDPSELTLAKHLLQLH 513

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            VI+       P +L  YL++L+  F+  +      P L+     +      RL L H  
Sbjct: 514 EVIDAVAQELLPNRLCQYLFELSQKFNQFYDRC---PVLK----ADECDRSSRLALCHLT 566

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+   + M
Sbjct: 567 AETLRLGLSLLGISVLDRM 585


>gi|300870723|ref|YP_003785594.1| arginyl-tRNA synthetase ArgS [Brachyspira pilosicoli 95/1000]
 gi|300688422|gb|ADK31093.1| arginyl-tRNA synthetase, ArgS [Brachyspira pilosicoli 95/1000]
          Length = 529

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 191/580 (32%), Positives = 287/580 (49%), Gaps = 65/580 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L NYLK+ID      + I   I I    D   G  ++  AM L++ L  +P  IA 
Sbjct: 10  IKEALCNYLKDIDV-----ENIDSYIDIGYTVDEKFGDYASPVAMRLAKALKKNPFDIAN 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV ++      D+V +A  GFINL LS  Y+ + ++ ++    +YG+N      ++ +E
Sbjct: 65  DIV-KLIDKKYFDNVEVARPGFINLTLSKDYINECINQLLEDD-DYGKNSAEDKKRILVE 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTGP+H+GH R A +G  L++++ + G++V +E+Y+NDAG QI  L  SV     
Sbjct: 123 YVSANPTGPLHIGHGRWAAIGSALSNILKYVGHDVYQEFYVNDAGEQITKLNESVNA--- 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                   ++PE  Y G Y+K +                       ++      +++  R
Sbjct: 180 ---VKEGREIPEDGYHGAYIKDIA---------------------KMEGVPKDIILEQQR 215

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L+      D + SE      +   +   ID L  +G ++E                + 
Sbjct: 216 KLLERFRTYMDNYASE--LKIREGGELEKTIDYLNEKGLLFE----------------ED 257

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
               FRST  GDD DR + KS+GSYTYFA D+ Y K K +RG+  +I ++G+DH GYV R
Sbjct: 258 NATWFRSTEYGDDKDRVVKKSNGSYTYFAPDITYHKNKIDRGYKYLIDILGADHHGYVPR 317

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           + A   AVS+  A + V+L +LVRLYR    ++MSKR GD I+L  V+DE+G D  R+ +
Sbjct: 318 ITAAVRAVSDDTADLKVILGQLVRLYRGNELVRMSKRTGDMISLEEVIDEIGVDPTRYFL 377

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNVI 485
           L R  S  LDFD    K++  +NPV+YVQYAYAR  +IF + ++     D++  F  N I
Sbjct: 378 LMRSYSSSLDFDLELAKKKDNDNPVYYVQYAYARVCNIFFKLEEKNMKYDYNKKFDINKI 437

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             ES      L+L   +  +P  I  +  + E Y L  Y YD+AS  H  +         
Sbjct: 438 SNEST-----LKLAKMILRFPDEIYESAKSLEVYTLLNYTYDVASALHKFYYDN------ 486

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V   N  +   RL L+ AV  I+    +IIG+     M
Sbjct: 487 -IVLEENDDIRQERLTLIRAVKKILGICFDIIGITKIERM 525


>gi|50365371|ref|YP_053796.1| arginyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81391744|sp|Q6F0R1|SYR_MESFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50363927|gb|AAT75912.1| arginyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 553

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 174/590 (29%), Positives = 282/590 (47%), Gaps = 45/590 (7%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             +  S +K  LKEI  K  + K      ++E  ++    H ST  A++ ++ L  +P+ 
Sbjct: 1   MENIISIVKKDLKEIAQKFNISK----DPIVEINKNNIDSHFSTTLALMSAKELKQNPIQ 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +AE I   +      D + IAG GFIN+ L    L   + +I      YG+N I      
Sbjct: 57  LAENIKNELLQKDYYDQIEIAGPGFINIKLKTELLSTTIKNITTLKEAYGKNKIKNKIIN 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
             E+VSANPTG +HVGH R AV G  L  ++ F GYEV  E+Y NDAG QIN LA++VF 
Sbjct: 117 I-EYVSANPTGFLHVGHARNAVTGSVLEEVLKFDGYEVQTEFYTNDAGNQINILAVTVFV 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDY 236
            Y  AL   +++ P   Y G +   +   +  KY  +  N         +E+   I +  
Sbjct: 176 HYLWAL-GIETEKPANTYGGTFYDDLANIMIQKYGDKFKNLTFTETAISDEETHQIFRKE 234

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +VQ  +  I+  LK   +  D + SE + +  D + I  ++     +   YE        
Sbjct: 235 AVQHFLTEIKQQLKDFGVVIDHYSSEQEMY--DTNQIEKLLKEYKEKNATYEA------- 285

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                       L  ++T  GDD DR L+K DGS TY   DLA    + +R   D +I +
Sbjct: 286 ---------DGALWLKTTEFGDDKDRVLVKKDGSLTYIVPDLATHNIRIQRTHADVLINI 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G DH GY+ R+ A    +      + + + ++VRL +DG   KMSKR G  + L  +++
Sbjct: 337 WGGDHHGYIPRMRAGLQLLGHNPDILEIEMVQMVRLIKDGKEYKMSKRKGTAVWLVDIME 396

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG D++R+M+  + +S  +D D   V++++  NPV+Y QYA ARC SI  QA       
Sbjct: 397 MVGKDALRYMLASKSSSSHMDLDLDLVQQKNATNPVYYAQYATARCHSILNQADQKNIKA 456

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           + ++            +  E++L++ L  + +VI+ +   + P  +  Y+  +   FH +
Sbjct: 457 NLNVSNL-------LSNKKEVELLLTLDNFNQVIQMSAKNRAPQLICEYIQTVCKQFHSY 509

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++        + +  N+   +  RL LV +V  ++ +  NIIGV +   M
Sbjct: 510 YAD------TKILDENDVPTSEARLGLVLSVLQVLTNAFNIIGVSALETM 553


>gi|157738329|ref|YP_001491013.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980179|sp|A8EWM0|SYR_ARCB4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157700183|gb|ABV68343.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 529

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 178/569 (31%), Positives = 296/569 (52%), Gaps = 41/569 (7%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           +   K  +EK +   IV+E+P+D + GH +T  A  L++ L   P+ IA+ +V +++   
Sbjct: 2   QNLVKEFIEKVLETNIVLEKPKDVSLGHYATPVAFSLAKELKKSPMLIAQELVTKLENPS 61

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
             + +  A  GFIN  LSP +L+ ++   + +   + +    K  K+ +E+VSANPTGP+
Sbjct: 62  LFEKIE-AVNGFINFKLSPLFLQSLVDDALSNKENFAKQ-HKKSEKILLEYVSANPTGPL 119

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+ GD+LA +  + GY++T EYYINDAG+Q++ L LSV    +  +Y  D   
Sbjct: 120 HIGHARGAIFGDSLARVGKYLGYDITTEYYINDAGSQMDLLGLSVNLAARDFIYGEDVSY 179

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE YY G YL  +  ++   Y  + L   +EK    +       +M +I  DLK L I+ 
Sbjct: 180 PEVYYRGDYLIDIANQIIQDYGKDYL--YDEKNFKDIALLGKDFVMNLIIKDLKDLGIEF 237

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D F+SE   +    S   +    L   G +Y+                   +   +ST  
Sbjct: 238 DNFVSEKSLY----SSWNETKRVLEENGSLYD----------------KDDKTYLKSTQY 277

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR +++ +G  TY A D+ Y K KY+R FD  I + G+DH GY+ R++A    +  
Sbjct: 278 GDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRNFDRYINIWGADHHGYITRVKAAIEFLGN 337

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             +++ VLL ++V+L + G P KMSKR G+ I +  + +E+GSD++RF+ L +K+   L+
Sbjct: 338 DSSKLEVLLSQMVQLLKGGEPYKMSKRKGNVILMSEITEEIGSDALRFIFLTKKSDTHLE 397

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD   +K Q   NP+FY+ YA+AR   +F +A   F D+    F +         +   L
Sbjct: 398 FDIDTLKNQDSSNPIFYINYAHARINQVFVKAGVNFDDIKDISFEK--------LNQDGL 449

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+        ++  A   ++  K+  YLY+LAS  H  ++        + + ++ + L 
Sbjct: 450 NLVYESLLLESILVEAFAKRDMQKITEYLYNLASSIHKFYNEH------KIIGSDEQNL- 502

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L+++   A  I  GL ++G+E+   M
Sbjct: 503 --YLKVLSIAALSIKVGLKLLGIEAKEIM 529


>gi|315636616|ref|ZP_07891850.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479125|gb|EFU69824.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 529

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 178/569 (31%), Positives = 296/569 (52%), Gaps = 41/569 (7%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           +   K  +EK +   IV+E+P+D + GH +T  A  L++ L   P+ IA+ +V +++   
Sbjct: 2   QNLVKEFIEKVLETNIVLEKPKDVSLGHYATPVAFSLAKELKKSPMLIAQELVTKLENPS 61

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
             + +  A  GFIN  LSP +L+ ++   + +   + +    K  K+ +E+VSANPTGP+
Sbjct: 62  LFEKIE-AVNGFINFKLSPLFLQSLVDDALSNKENFAKQ-HKKSEKILLEYVSANPTGPL 119

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+ GD+LA +  + GY++T EYYINDAG+Q++ L LSV    +  +Y  D   
Sbjct: 120 HIGHARGAIFGDSLARVGKYLGYDITTEYYINDAGSQMDLLGLSVNLAARDFIYGEDVSY 179

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           PE YY G YL  +  ++   Y  + L   +EK    +       +M +I  DLK L I+ 
Sbjct: 180 PEVYYRGDYLIDIANQIIQDYGKDYL--YDEKNFKDIALLGKDFVMNLIIKDLKDLGIEF 237

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D F+SE   +    S   +    L   G +Y+                   +   +ST  
Sbjct: 238 DNFVSEKSLY----SSWNETKRVLEENGSLYD----------------KDDKTYLKSTQY 277

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GDD DR +++ +G  TY A D+ Y K KY+R FD  I + G+DH GY+ R++A    +  
Sbjct: 278 GDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRSFDRYINIWGADHHGYITRVKAAIEFLGN 337

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             +++ VLL ++V+L + G P KMSKR G+ I +  + +E+GSD++RF+ L +K+   L+
Sbjct: 338 DSSKLEVLLSQMVQLLKGGEPYKMSKRKGNVILMSEITEEIGSDALRFIFLTKKSDTHLE 397

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD   +K Q   NP+FY+ YA+AR   +F +A   F D+    F +         +   L
Sbjct: 398 FDIDTLKNQDSSNPIFYINYAHARINQVFVKAGVNFDDIKDISFEK--------LNQDGL 449

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+        ++  A   ++  K+  YLY+LAS  H  ++        + + ++ + L 
Sbjct: 450 NLVYESLLLESILVEAFAKRDMQKITEYLYNLASSIHKFYNEH------KIIGSDEQNL- 502

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L+++   A  I  GL ++G+E+   M
Sbjct: 503 --YLKVLSIAALSIKVGLKLLGIEAKEIM 529


>gi|307720328|ref|YP_003891468.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978421|gb|ADN08456.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 531

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 176/563 (31%), Positives = 294/563 (52%), Gaps = 44/563 (7%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           + +KI   +V+E+PRD + GH +T  A  L++ L   P+ IA+ + +  +       V  
Sbjct: 9   LREKIGREVVLEKPRDRSFGHFATPIAFSLAKELRKSPMVIADELASSFESSDVFSKVE- 67

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           A KG++N  LS  +L +  S  + +  E+      K  K+ +EFVSANPTGP+H+GH R 
Sbjct: 68  AVKGYLNFRLSEDFLAEYASWALKNPSEFATQE--KNQKILLEFVSANPTGPLHIGHARG 125

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV GDTL  +    GY++T EYY+NDAG QI+ L LS+    +  L +   + PE YY G
Sbjct: 126 AVYGDTLYRMAKHLGYDITAEYYVNDAGNQIDLLGLSIQLHARDNLLDETVEYPESYYRG 185

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            YL  + +++ +K+ SE+  F +E     +  ++   +MKII  DL  LNI  D F+ E 
Sbjct: 186 EYLDALARDVMEKFGSEI--FYDESRQRELALWAKDEVMKIIAKDLGDLNIFFDTFVYES 243

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +      ++ +   +  +                        ++   S   GD+ DR 
Sbjct: 244 TLYDDWDRVMKKMGSGIYEK----------------------DGKIWIASEAKGDEKDRV 281

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +++ DG  TY A D+ Y   K+ERG+D+ I + G+DH GY+ R++A    +     ++ V
Sbjct: 282 VVREDGRPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIPRVKAAIEYLGYDSNKLEV 341

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL ++V L +DG P KMSKRAG+ I +  +V+E+G+D++RF+   +K+   L+FD  + K
Sbjct: 342 LLSQMVSLLKDGEPYKMSKRAGNVILMSDIVEEIGADALRFIFASKKSDTALEFDLAEFK 401

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +Q   NP+FY+QYA+AR +++  +A     D+            ++    + L       
Sbjct: 402 KQDSSNPIFYIQYAHARIQTLLSKATLTKEDIANASLKNLGENADTLLFDALL------- 454

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P VIE+A   ++  KL  YL  LA+  H  +        +R +   +       L+L+
Sbjct: 455 -LPEVIEDAFNTRQVQKLTDYLKSLAASLHKFYYD------VRMIGTEDEAKL---LKLM 504

Query: 564 HAVASIINSGLNIIGVESPNEMS 586
             VA  I +GL+++G+++ ++MS
Sbjct: 505 LMVALSIKTGLSLMGIDAKDKMS 527


>gi|317491773|ref|ZP_07950208.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920207|gb|EFV41531.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 576

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 239/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E       ++ +      G    N  M  ++ LG+ 
Sbjct: 1   MNIQALLSDKVTQALVAAGAPANSEA------LVRQSAKAQFGDYQANGVMGAAKKLGIA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  +++D    +V IAG GFIN++L P++L K +   +    E       K 
Sbjct: 55  PRQLAEQVLTHLELDGIASNVEIAGPGFINIFLDPAWLAKQVEMALAD--ERLGVAAVKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     D    E +Y            A K+  E   F E     +VK      
Sbjct: 173 LEKMQNEHANEMDLSDLEAFYRE----------AKKHYDEDAEFAERARAYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++ ++ R + +  +D +   +    +  GI+   K+K   
Sbjct: 223 YCREMWRKL----VDITMSQNQKNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   R+G  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRSGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAGKLIAEKNPDLSGDELAKLVEVVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      +D      N++  E      E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVSSIFKRAG-----IDEQSLSGNIVLTE----DREKALAARLIQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   +           + A + +    RLQL    A 
Sbjct: 506 ITQVAREGTPHVMCTYLYDLAGLFSSFYEAC------PILTAESEEQRNSRLQLAALTAR 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+E+   M
Sbjct: 560 TLKTGLDTLGIETVERM 576


>gi|268679054|ref|YP_003303485.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617085|gb|ACZ11450.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 528

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 165/562 (29%), Positives = 293/562 (52%), Gaps = 42/562 (7%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           +++K+    V+E+P + + GH +T  A  L++ L   P+ IAE I +    +     V  
Sbjct: 9   IKEKLQREFVLEKPANLSFGHYATPIAFSLAKELKKSPIAIAEEICSSFDTNDIFQEV-T 67

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
             KG+IN  LS  +L +  +  + +  ++G++   +   + +E+VSANPTGP+H+GH R 
Sbjct: 68  PIKGYINFKLSERFLDQYATWAIQNEEQFGQDE--QHETILLEYVSANPTGPLHIGHARG 125

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV+GD LA +    GY++T EYY+NDAG Q++ L LS++   ++ +       PE +Y G
Sbjct: 126 AVIGDALARIGKHLGYQITTEYYVNDAGNQVDLLGLSIYLAGRENILGLHVTWPEEFYRG 185

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y+  +      +  S +  F +E  + ++  +    M+++I+ +L  ++I  + F+SE 
Sbjct: 186 EYIVDLAHVAQAELGSVI--FEDEANIAVLSTWGKDKMLELIKSNLADVDIFFEQFVSEK 243

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +        +    L +    YE                +  ++  RST +GD+ DR 
Sbjct: 244 SLY----DKWDESFAKLQKNDKTYE----------------EGGKIWIRSTELGDEKDRV 283

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +++ DG  TY A D+ Y   K++R +D  I + G+DH GY+ R+++    +   ++++ V
Sbjct: 284 VVREDGRPTYLAGDIIYHDNKFQRSYDKYINIWGADHHGYITRVKSAINFLGYDESKLEV 343

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL ++V L + G P KMSKRAG+FI +  VV EVGSD++RF+ L +K+   L+FD    K
Sbjct: 344 LLAQMVSLLKGGEPYKMSKRAGNFILMSDVVSEVGSDALRFVFLSKKSDTHLEFDVDVFK 403

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           ++   NP+FY+ YA+AR   IF +A     D++        +P E+        L+    
Sbjct: 404 QEDSNNPIFYINYAHARINQIFAKAGKSIADVEN-------VPLEN-MSEEAQNLLFSAL 455

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P V+E+A  +++  K+  YL +LA+  H  ++  R       V + + +     L+L 
Sbjct: 456 LLPEVLEDAFHSRQVQKVTEYLKNLAASLHKFYNENR------VVGSVDEEKF---LKLF 506

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  +  G+ +IG+ +   M
Sbjct: 507 AVVALSLRVGMKLIGITAKERM 528


>gi|56750043|ref|YP_170744.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81596947|sp|Q5N643|SYR_SYNP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56685002|dbj|BAD78224.1| arginyl-tRNA-synthetase [Synechococcus elongatus PCC 6301]
          Length = 584

 Score =  448 bits (1153), Expect = e-123,   Method: Composition-based stats.
 Identities = 139/615 (22%), Positives = 237/615 (38%), Gaps = 74/615 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++L++  +         +      ++    +   G   +N AM L++ LG  P  IAE +
Sbjct: 6   AQLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLGQPPRAIAETL 65

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V  + +    +   IAG GFIN  L PSYL   L  +       G   +    +V ++F 
Sbjct: 66  VQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTD-ERLGIQPVSPPQRVIVDFS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R  ++GD++A ++ F G+EV R  ++ D G Q   L   +  +Y QA
Sbjct: 125 SPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFLQEQYPQA 184

Query: 189 LYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L   D    SDL   Y              +     +++    +        + Q +   
Sbjct: 185 LSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATA---RQAWQLLCDQ 241

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R + + +  + DI + E      +P  +  I+++L R G + E        +  Q   +
Sbjct: 242 SRREFQKIYDRLDIQLEERGESFYNPY-LPAIVEDLRRLGLLVE-------DQGAQCVFL 293

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
           +  Q        G  +   + KSDG Y Y   DLA  + +  +     +IYV  S  + +
Sbjct: 294 EGFQ-----NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 364 VKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
             ++  VA         AQI  +   LV+   DG   K+  RAGD + LR ++DE     
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRA 405

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F K+    + N 
Sbjct: 406 RTDLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLAL-QGNT 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R + I R+    F  LD               + +E  L   + +   V++
Sbjct: 465 APYLLYAYVRIQGIARKGGIDFAQLDP--------VAAELTEPTERSLAKQVLQLGEVLD 516

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P +L  YL++L+  F+  +           + A   +    RL L    A  +
Sbjct: 517 EVARDLLPNRLCSYLFELSQTFNQFYDRC------PILNAEEPQ-RTSRLLLCDLTARTL 569

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+     M
Sbjct: 570 KLGLSLLGISVLERM 584


>gi|93141321|sp|Q8KPU9|SYR_SYNE7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 584

 Score =  448 bits (1153), Expect = e-123,   Method: Composition-based stats.
 Identities = 139/615 (22%), Positives = 237/615 (38%), Gaps = 74/615 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++L++  +         +      ++    +   G   +N AM L++ LG  P  IAE +
Sbjct: 6   AQLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLGQPPRAIAETL 65

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V  + +    +   IAG GFIN  L PSYL   L  +       G   +    +V ++F 
Sbjct: 66  VQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTD-ERLGIQPVSPPQRVIVDFS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R  ++GD++A ++ F G+EV R  ++ D G Q   L   +  +Y QA
Sbjct: 125 SPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFLQEQYPQA 184

Query: 189 LYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L   D    SDL   Y              +     +++    +        + Q +   
Sbjct: 185 LSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATA---RQAWQLLCDQ 241

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R + + +  + DI + E      +P  +  I+++L R G + E        +  Q   +
Sbjct: 242 SRREFQKIYDRLDIQLEERGESFYNPY-LPAIVEDLRRLGLLVE-------DQGAQCVFL 293

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
           +  Q        G  +   + KSDG Y Y   DLA  + +  +     +IYV  S  + +
Sbjct: 294 EGFQ-----NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 364 VKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
             ++  VA         AQI  +   LV+   DG   K+  RAGD + LR ++DE     
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRA 405

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F K+    + N 
Sbjct: 406 RTDLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLAL-QGNT 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R + I R+    F  LD               + +E  L   + +   V++
Sbjct: 465 APYLLYAYVRIQGIARKGGIDFAQLDP--------VAAVLTEPTERSLAKQVLQLGEVLD 516

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P +L  YL++L+  F+  +           + A   +    RL L    A  +
Sbjct: 517 EVARDLLPNRLCSYLFELSQTFNQFYDRC------PILNAEEPQ-RTSRLLLCDLTARTL 569

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+     M
Sbjct: 570 KLGLSLLGISVLERM 584


>gi|81300386|ref|YP_400594.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81169267|gb|ABB57607.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 590

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 139/615 (22%), Positives = 237/615 (38%), Gaps = 74/615 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++L++  +         +      ++    +   G   +N AM L++ LG  P  IAE +
Sbjct: 12  AQLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLGQPPRAIAETL 71

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V  + +    +   IAG GFIN  L PSYL   L  +       G   +    +V ++F 
Sbjct: 72  VQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTD-ERLGIQPVSPPQRVIVDFS 130

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R  ++GD++A ++ F G+EV R  ++ D G Q   L   +  +Y QA
Sbjct: 131 SPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFLQEQYPQA 190

Query: 189 LYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L   D    SDL   Y              +     +++    +        + Q +   
Sbjct: 191 LSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATA---RQAWQLLCDQ 247

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R + + +  + DI + E      +P  +  I+++L R G + E        +  Q   +
Sbjct: 248 SRREFQKIYDRLDIQLEERGESFYNPY-LPAIVEDLRRLGLLVE-------DQGAQCVFL 299

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
           +  Q        G  +   + KSDG Y Y   DLA  + +  +     +IYV  S  + +
Sbjct: 300 EGFQ-----NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 354

Query: 364 VKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
             ++  VA         AQI  +   LV+   DG   K+  RAGD + LR ++DE     
Sbjct: 355 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRA 411

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F K+    + N 
Sbjct: 412 RTDLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLAL-QGNT 470

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R + I R+    F  LD               + +E  L   + +   V++
Sbjct: 471 APYLLYAYVRIQGIARKGGIDFAQLDP--------VAAVLTEPTERSLAKQVLQLGEVLD 522

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P +L  YL++L+  F+  +           + A   +    RL L    A  +
Sbjct: 523 EVARDLLPNRLCSYLFELSQTFNQFYDRC------PILNAEEPQ-RTSRLLLCDLTARTL 575

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+     M
Sbjct: 576 KLGLSLLGISVLERM 590


>gi|170769348|ref|ZP_02903801.1| arginyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121672|gb|EDS90603.1| arginyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 577

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGIATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   + +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIS----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|24113254|ref|NP_707764.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30063324|ref|NP_837495.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|39932172|sp|Q83KQ3|SYR_SHIFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24052255|gb|AAN43471.1| arginine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30041576|gb|AAP17304.1| arginine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|281601317|gb|ADA74301.1| Arginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313650080|gb|EFS14493.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332757309|gb|EGJ87646.1| arginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332757427|gb|EGJ87762.1| arginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332766600|gb|EGJ96804.1| arginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333017694|gb|EGK37006.1| arginyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 577

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 136/617 (22%), Positives = 246/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------IRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GDT    + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDVFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|194429348|ref|ZP_03061874.1| arginyl-tRNA synthetase [Escherichia coli B171]
 gi|194412655|gb|EDX28951.1| arginyl-tRNA synthetase [Escherichia coli B171]
          Length = 577

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYESLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 ETLERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|187251307|ref|YP_001875789.1| arginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|254782964|sp|B2KD56|SYR_ELUMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|186971467|gb|ACC98452.1| Arginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 532

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 179/584 (30%), Positives = 275/584 (47%), Gaps = 55/584 (9%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            L  D  ++L N           E  +L  + +          +S   AM  ++ L  +P
Sbjct: 4   NLKKDIETKLFNA-------EVFEGAVLPPVDLTPAPPHTGADISLTWAMSAAKTLKKNP 56

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           L IA+  V  I     V S   A  GFIN+ L  S++        +      +       
Sbjct: 57  LEIAKAAVKVISEVTFVASASYAAPGFINIILEDSFISSSALDRRLKNR---KTAGENKE 113

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +V IEFVSANPTGP+HV   R A +GD+L  +    G +   EYY+ND+G Q   L +S+
Sbjct: 114 RVLIEFVSANPTGPLHVASGRGASLGDSLVRIFNALGIQCDSEYYVNDSGNQAMLLGVSL 173

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R       N  + PE  Y G YL     E+AD+      ++ EE+       Y+++ +
Sbjct: 174 KARV------NGQEPPENGYHGSYLI----EMADEIREMSKDWTEEQ----FSIYAIEYL 219

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  + D++A N+    +  E + ++   S     +D L  +G  YE             
Sbjct: 220 IKTHQRDMQAFNVNFTRWFRESELYK--ESLPAKALDFLKEKGLAYEA------------ 265

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  + F +T   DD DR L+++DG  TYF AD+AY K KY+RGF  ++ ++G+DH 
Sbjct: 266 ----DGAVWFGTTKDNDDKDRVLVRADGRPTYFLADIAYHKNKYDRGFTTLVDILGADHH 321

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GYV R++A   A+ E +     ++ +LV L   G  +KMSKR+G FITL+ + +EVG+D+
Sbjct: 322 GYVPRMKAAVKALGENEESFVPIIHQLVHLIEGGEKVKMSKRSGRFITLKELTEEVGADA 381

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF+   R     ++FD    K+++ ENPVFYVQY +AR  SI R A+        +L  
Sbjct: 382 CRFLFASRTPDAHMNFDIDLAKKRTNENPVFYVQYVHARAASIARMAEQKHLQQAENLVD 441

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             + PQ       E  L++ +  +   ++N      P+ L  YL +LA  FH  +   R 
Sbjct: 442 FKLTPQ-------ERTLLIKILWFKHALKNCVRDMSPHHLTTYLIELAGNFHSFYDACR- 493

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V  +N + T  RL +   V   I  GL  +GV +P EM
Sbjct: 494 -----VVDEDNPQTTAHRLLICDRVRERIKKGLEFLGVSAPEEM 532


>gi|218695442|ref|YP_002403109.1| arginyl-tRNA synthetase [Escherichia coli 55989]
 gi|254782962|sp|B7L7S9|SYR_ECO55 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218352174|emb|CAU97913.1| arginyl-tRNA synthetase [Escherichia coli 55989]
          Length = 577

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANSVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|187731263|ref|YP_001880686.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|218554464|ref|YP_002387377.1| arginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|256017920|ref|ZP_05431785.1| arginyl-tRNA synthetase [Shigella sp. D9]
 gi|300904762|ref|ZP_07122591.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300917544|ref|ZP_07134200.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|301306901|ref|ZP_07212947.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|332278952|ref|ZP_08391365.1| arginyl-tRNA synthetase [Shigella sp. D9]
 gi|226701378|sp|B7M2G7|SYR_ECO8A RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689519|sp|B2U4X7|SYR_SHIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187428255|gb|ACD07529.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|218361232|emb|CAQ98816.1| arginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|300403322|gb|EFJ86860.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300415223|gb|EFJ98533.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300837876|gb|EFK65636.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315257291|gb|EFU37259.1| arginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320177414|gb|EFW52415.1| Arginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320187322|gb|EFW62019.1| Arginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320198571|gb|EFW73171.1| Arginyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|324118936|gb|EGC12825.1| arginyl-tRNA synthetase [Escherichia coli E1167]
 gi|332101304|gb|EGJ04650.1| arginyl-tRNA synthetase [Shigella sp. D9]
          Length = 577

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|300819860|ref|ZP_07100045.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300527557|gb|EFK48619.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 577

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNSIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|331647473|ref|ZP_08348565.1| arginine--tRNA ligase [Escherichia coli M605]
 gi|330911686|gb|EGH40196.1| arginyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043197|gb|EGI15335.1| arginine--tRNA ligase [Escherichia coli M605]
          Length = 577

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILNAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|332756015|gb|EGJ86368.1| arginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|333003263|gb|EGK22809.1| arginyl-tRNA synthetase [Shigella flexneri K-218]
          Length = 577

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 136/617 (22%), Positives = 246/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------IRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GDT    + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|110805849|ref|YP_689369.1| arginyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|123146957|sp|Q0T3Q1|SYR_SHIF8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110615397|gb|ABF04064.1| arginine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 577

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 136/617 (22%), Positives = 246/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------IRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GDT    + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPYMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|157161347|ref|YP_001458665.1| arginyl-tRNA synthetase [Escherichia coli HS]
 gi|166987302|sp|A8A178|SYR_ECOHS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157067027|gb|ABV06282.1| arginyl-tRNA synthetase [Escherichia coli HS]
          Length = 577

 Score =  445 bits (1145), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADGLEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|293415191|ref|ZP_06657834.1| arginyl-tRNA synthetase [Escherichia coli B185]
 gi|331653286|ref|ZP_08354291.1| arginine--tRNA ligase [Escherichia coli M718]
 gi|291432839|gb|EFF05818.1| arginyl-tRNA synthetase [Escherichia coli B185]
 gi|331049384|gb|EGI21456.1| arginine--tRNA ligase [Escherichia coli M718]
          Length = 577

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLATAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|193065443|ref|ZP_03046512.1| arginyl-tRNA synthetase [Escherichia coli E22]
 gi|260844286|ref|YP_003222064.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855816|ref|YP_003229707.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868474|ref|YP_003234876.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|192926848|gb|EDV81473.1| arginyl-tRNA synthetase [Escherichia coli E22]
 gi|257754465|dbj|BAI25967.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759433|dbj|BAI30930.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764830|dbj|BAI36325.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323152635|gb|EFZ38911.1| arginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323158639|gb|EFZ44653.1| arginyl-tRNA synthetase [Escherichia coli E128010]
 gi|323174607|gb|EFZ60228.1| arginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180673|gb|EFZ66218.1| arginyl-tRNA synthetase [Escherichia coli 1180]
          Length = 577

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYESLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|333002986|gb|EGK22540.1| arginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333004491|gb|EGK24020.1| arginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333017865|gb|EGK37171.1| arginyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 577

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 135/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------IRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|26248143|ref|NP_754183.1| arginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|170019779|ref|YP_001724733.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194439027|ref|ZP_03071110.1| arginyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209919302|ref|YP_002293386.1| arginyl-tRNA synthetase [Escherichia coli SE11]
 gi|227885696|ref|ZP_04003501.1| arginyl-tRNA synthetase [Escherichia coli 83972]
 gi|293446263|ref|ZP_06662685.1| arginyl-tRNA synthetase [Escherichia coli B088]
 gi|300994045|ref|ZP_07180664.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050768|ref|ZP_07197626.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|306814294|ref|ZP_07448460.1| arginyl-tRNA synthetase [Escherichia coli NC101]
 gi|312967079|ref|ZP_07781297.1| arginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331668572|ref|ZP_08369420.1| arginine--tRNA ligase [Escherichia coli TA271]
 gi|331677761|ref|ZP_08378436.1| arginine--tRNA ligase [Escherichia coli H591]
 gi|29427485|sp|Q8FGQ0|SYR_ECOL6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083533|sp|B1J0L2|SYR_ECOLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238065088|sp|B6I0S7|SYR_ECOSE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|26108547|gb|AAN80750.1|AE016762_3 Arginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|169754707|gb|ACA77406.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194421986|gb|EDX37990.1| arginyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209912561|dbj|BAG77635.1| arginyl-tRNA synthase [Escherichia coli SE11]
 gi|222033625|emb|CAP76366.1| Arginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227837269|gb|EEJ47735.1| arginyl-tRNA synthetase [Escherichia coli 83972]
 gi|281178946|dbj|BAI55276.1| arginyl-tRNA synthetase [Escherichia coli SE15]
 gi|291323093|gb|EFE62521.1| arginyl-tRNA synthetase [Escherichia coli B088]
 gi|300297585|gb|EFJ53970.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300406413|gb|EFJ89951.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|305852453|gb|EFM52904.1| arginyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553895|gb|ADN46670.1| arginine tRNA synthetase [Escherichia coli ABU 83972]
 gi|312288543|gb|EFR16445.1| arginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312946476|gb|ADR27303.1| arginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315290304|gb|EFU49680.1| arginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|323186348|gb|EFZ71698.1| arginyl-tRNA synthetase [Escherichia coli 1357]
 gi|323186757|gb|EFZ72077.1| arginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323972615|gb|EGB67818.1| arginyl-tRNA synthetase [Escherichia coli TA007]
 gi|324017993|gb|EGB87212.1| arginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331063766|gb|EGI35677.1| arginine--tRNA ligase [Escherichia coli TA271]
 gi|331074221|gb|EGI45541.1| arginine--tRNA ligase [Escherichia coli H591]
 gi|332343602|gb|AEE56936.1| arginyl-tRNA synthetase ArgS [Escherichia coli UMNK88]
          Length = 577

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|22002514|gb|AAM82666.1| Syr [Synechococcus elongatus PCC 7942]
          Length = 584

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 137/615 (22%), Positives = 235/615 (38%), Gaps = 74/615 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++L++  +         +      ++    +   G   +N AM L++ LG  P  IAE +
Sbjct: 6   AQLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLGQPPRAIAETL 65

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V  + +    +   IAG GFIN  L PSYL   L  +       G   +    +V ++F 
Sbjct: 66  VQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTD-ERLGIQPVSPPQRVIVDFS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R  ++GD++A ++ F G+EV R  ++ D G Q   L   +  +Y QA
Sbjct: 125 SPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFLQEQYPQA 184

Query: 189 LYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L   D    SDL   Y              +     +++    +        + Q +   
Sbjct: 185 LSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATA---RQAWQLLCDQ 241

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R + + +  + DI + E      +P  +  I+++L R G + E        +  Q   +
Sbjct: 242 SRREFQKIYDRLDIQLEERGESFYNPY-LPAIVEDLRRLGLLVE-------DQGAQCVFL 293

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
           +  Q        G  +   + KSDG Y Y   DLA  + +  +     +IYV  S  + +
Sbjct: 294 EGFQ-----NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANH 348

Query: 364 VKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
             ++  VA         AQI  +   LV+   DG   K+  RAGD + LR ++DE     
Sbjct: 349 FAQVFQVAQRAGWLPAAAQIEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRA 405

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F K+    + N 
Sbjct: 406 RTDLTTRIAAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLAL-QGNT 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R + I R+    F  LD               + +E  L   + +   V+ 
Sbjct: 465 APYLLYAYVRIQGIARKGGIDFAQLDP--------VAAVLTEPTERSLAKQVLQLGEVLN 516

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P +L  YL++L+  F+  +           + A   +    RL +       +
Sbjct: 517 EVARDLLPNRLCSYLFELSQTFNQFYDRC------PILNAEEPQ-RTSRLLVCDLTGRTL 569

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+     M
Sbjct: 570 KLGLSLLGISVLERM 584


>gi|332089609|gb|EGI94711.1| arginyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 577

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 246/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E++      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEQQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|82543644|ref|YP_407591.1| arginyl-tRNA synthetase [Shigella boydii Sb227]
 gi|109895034|sp|Q322J5|SYR_SHIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81245055|gb|ABB65763.1| arginine tRNA synthetase [Shigella boydii Sb227]
 gi|332096695|gb|EGJ01686.1| arginyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 577

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWHKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|323968298|gb|EGB63705.1| arginyl-tRNA synthetase [Escherichia coli M863]
 gi|327253005|gb|EGE64659.1| arginyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 577

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDATVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|16129828|ref|NP_416390.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89108716|ref|AP_002496.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170081532|ref|YP_001730852.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188493635|ref|ZP_03000905.1| arginyl-tRNA synthetase [Escherichia coli 53638]
 gi|194434108|ref|ZP_03066377.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|238901091|ref|YP_002926887.1| arginyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773167|ref|YP_003035998.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161936|ref|YP_003045044.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022459|ref|ZP_05436324.1| arginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|291283058|ref|YP_003499876.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293410188|ref|ZP_06653764.1| arginyl-tRNA synthetase [Escherichia coli B354]
 gi|300822350|ref|ZP_07102491.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300928908|ref|ZP_07144413.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300935853|ref|ZP_07150811.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|301029326|ref|ZP_07192423.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301645607|ref|ZP_07245536.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307138541|ref|ZP_07497897.1| arginyl-tRNA synthetase [Escherichia coli H736]
 gi|312969919|ref|ZP_07784102.1| arginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331642494|ref|ZP_08343629.1| arginine--tRNA ligase [Escherichia coli H736]
 gi|331657926|ref|ZP_08358888.1| arginine--tRNA ligase [Escherichia coli TA206]
 gi|331683384|ref|ZP_08383985.1| arginine--tRNA ligase [Escherichia coli H299]
 gi|135169|sp|P11875|SYR_ECOLI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229558757|sp|B1XHE4|SYR_ECODH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|259511643|sp|C4ZQG0|SYR_ECOBW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|581040|emb|CAA33384.1| unnamed protein product [Escherichia coli K-12]
 gi|1736522|dbj|BAA15686.1| arginyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788184|gb|AAC74946.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|169889367|gb|ACB03074.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188488834|gb|EDU63937.1| arginyl-tRNA synthetase [Escherichia coli 53638]
 gi|194417652|gb|EDX33752.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|209767328|gb|ACI81976.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767334|gb|ACI81979.1| arginine tRNA synthetase [Escherichia coli]
 gi|238860014|gb|ACR62012.1| arginyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377597|emb|CAQ32353.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324211|gb|ACT28813.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973837|gb|ACT39508.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978031|gb|ACT43701.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449001|gb|ACX39423.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|290762931|gb|ADD56892.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291470656|gb|EFF13140.1| arginyl-tRNA synthetase [Escherichia coli B354]
 gi|299877752|gb|EFI85963.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300458965|gb|EFK22458.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300463136|gb|EFK26629.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300525233|gb|EFK46302.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|301076139|gb|EFK90945.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|309702099|emb|CBJ01414.1| arginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310338204|gb|EFQ03293.1| arginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315136519|dbj|BAJ43678.1| arginyl-tRNA synthetase [Escherichia coli DH1]
 gi|315617901|gb|EFU98499.1| arginyl-tRNA synthetase [Escherichia coli 3431]
 gi|320177757|gb|EFW52745.1| Arginyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320647090|gb|EFX15923.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652373|gb|EFX20671.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657974|gb|EFX25736.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658547|gb|EFX26241.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668445|gb|EFX35272.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323937134|gb|EGB33414.1| arginyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940456|gb|EGB36647.1| arginyl-tRNA synthetase [Escherichia coli E482]
 gi|323961931|gb|EGB57530.1| arginyl-tRNA synthetase [Escherichia coli H489]
 gi|324007268|gb|EGB76487.1| arginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|331039292|gb|EGI11512.1| arginine--tRNA ligase [Escherichia coli H736]
 gi|331056174|gb|EGI28183.1| arginine--tRNA ligase [Escherichia coli TA206]
 gi|331079599|gb|EGI50796.1| arginine--tRNA ligase [Escherichia coli H299]
 gi|332095145|gb|EGJ00176.1| arginyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 577

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|218689874|ref|YP_002398086.1| arginyl-tRNA synthetase [Escherichia coli ED1a]
 gi|254782963|sp|B7MW70|SYR_ECO81 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218427438|emb|CAR08336.2| arginyl-tRNA synthetase [Escherichia coli ED1a]
          Length = 577

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFHEMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|170683284|ref|YP_001743368.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218699552|ref|YP_002407181.1| arginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705377|ref|YP_002412896.1| arginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293405370|ref|ZP_06649362.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298381013|ref|ZP_06990612.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300899127|ref|ZP_07117409.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|301018279|ref|ZP_07182790.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331663376|ref|ZP_08364286.1| arginine--tRNA ligase [Escherichia coli TA143]
 gi|226701377|sp|B7NS42|SYR_ECO7I RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701379|sp|B7NBM7|SYR_ECOLU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701380|sp|B1LCZ5|SYR_ECOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170521002|gb|ACB19180.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218369538|emb|CAR17307.1| arginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218432474|emb|CAR13367.1| arginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284921796|emb|CBG34869.1| arginyl-tRNA synthetase [Escherichia coli 042]
 gi|291427578|gb|EFF00605.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298278455|gb|EFI19969.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357245|gb|EFJ73115.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300399749|gb|EFJ83287.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331059175|gb|EGI31152.1| arginine--tRNA ligase [Escherichia coli TA143]
          Length = 577

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L   +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|110641994|ref|YP_669724.1| arginyl-tRNA synthetase [Escherichia coli 536]
 gi|191173026|ref|ZP_03034560.1| arginyl-tRNA synthetase [Escherichia coli F11]
 gi|300982204|ref|ZP_07175916.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|123147998|sp|Q0TGV6|SYR_ECOL5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110343586|gb|ABG69823.1| arginyl-tRNA synthetase [Escherichia coli 536]
 gi|190906737|gb|EDV66342.1| arginyl-tRNA synthetase [Escherichia coli F11]
 gi|300307274|gb|EFJ61794.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|324013521|gb|EGB82740.1| arginyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 577

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 246/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S        + + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGV--AMPEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|154173779|ref|YP_001407667.1| arginyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166232771|sp|A7GWS5|SYR_CAMC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112803557|gb|EAU00901.1| arginyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 529

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 166/566 (29%), Positives = 289/566 (51%), Gaps = 41/566 (7%)

Query: 20  CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
            K ++ K +    V+E+P+D +  H +T  A  L++ L   P+ IA  +  + +     +
Sbjct: 5   IKSEIFKILGRDFVLEKPKDKSLAHYATPLAFSLAKELKKSPVAIANELACKFENSKIFE 64

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
               A  G++N  L   +L +I    + +G ++      +     IE++SANPTGP+H+G
Sbjct: 65  --VSAVNGYLNFKLKGEFLDEISKDALKNGDKFASGKARQDGSTFIEYISANPTGPLHIG 122

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R AV GDTLA +    GY++  EYYINDAG QI+ L  S+    +  L++ + + P+ 
Sbjct: 123 HVRGAVYGDTLARIGTHLGYKIFTEYYINDAGNQIDLLGTSISLAARDVLFHENVEYPQK 182

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           YY G Y+  +  E   K+  E+  F +E     + ++    ++ II+ DL  + I    +
Sbjct: 183 YYRGEYIVDIANEALKKFGKEI--FYDEARNLELAEFGKDIVLDIIKKDLAGVGISIQGW 240

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE   ++     +   I+ L R   +YE                        ST +GDD
Sbjct: 241 ASEKALYK----ELEPTIEKLKRSNQMYE----------------KEGATYIASTTLGDD 280

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            DR ++++DG  TY A D+ Y   K+ER +D+ I + G+DH GY+ RL+A    +   + 
Sbjct: 281 NDRVVVRNDGRPTYLAGDIIYHNDKFERNYDHYINIWGADHHGYIARLKAAIHFLGYDEN 340

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           ++ ++L ++V L +DG P KMSKRAG+ + +  +V+E+GSD++RF+ + + N+  L+FD 
Sbjct: 341 RLEIILMQMVSLLKDGKPYKMSKRAGNAVLMSDIVEEIGSDALRFIFISKANTSSLEFDI 400

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++K++   NP+FY+ YA+AR   IF +A     D+        +       D +   L+
Sbjct: 401 DELKKEDSSNPIFYINYAHARVNQIFAKAGKSVSDV--------LDASLENLDDNAKNLL 452

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                 P ++E+A  +++  K++ YL  LA+ FH  ++  R         AN   L    
Sbjct: 453 FEALILPEILEDAFASRQLQKVSDYLKSLAASFHKFYNENRV-----IGSANEESL---- 503

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+L   VA  + + L++IG+ + + M
Sbjct: 504 LKLFAVVALSLRTALSLIGITAKDRM 529


>gi|323977939|gb|EGB73025.1| arginyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 577

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|315296537|gb|EFU55834.1| arginyl-tRNA synthetase [Escherichia coli MS 16-3]
          Length = 577

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 246/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S        + + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGV--AMPEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|74311774|ref|YP_310193.1| arginyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|109895036|sp|Q3Z2Q4|SYR_SHISS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|73855251|gb|AAZ87958.1| arginine tRNA synthetase [Shigella sonnei Ss046]
 gi|323165334|gb|EFZ51122.1| arginyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 578

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 135/617 (21%), Positives = 243/617 (39%), Gaps = 71/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      +        G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRHSAKVQFGDYQANGMMAVAKKLGMT 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             W  +Q   N   ++      G Y        A K+  E   F E     +VK  S   
Sbjct: 172 --WLEKQQQENAGDEMELADLEGFYRD------AKKHYDEDEEFAERARNYVVKLQSGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 224 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 280 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 397 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 456 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 507

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 508 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 561

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 562 TLKLGLDTLGIETVERM 578


>gi|191168079|ref|ZP_03029878.1| arginyl-tRNA synthetase [Escherichia coli B7A]
 gi|300924967|ref|ZP_07140893.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301327666|ref|ZP_07220873.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307314212|ref|ZP_07593822.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|309796014|ref|ZP_07690427.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190901877|gb|EDV61627.1| arginyl-tRNA synthetase [Escherichia coli B7A]
 gi|300418879|gb|EFK02190.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300845761|gb|EFK73521.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306906181|gb|EFN36699.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|308120464|gb|EFO57726.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|315061182|gb|ADT75509.1| arginyl-tRNA synthetase [Escherichia coli W]
 gi|323378241|gb|ADX50509.1| arginyl-tRNA synthetase [Escherichia coli KO11]
          Length = 577

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L   +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHVQQALASDRLDVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|215487089|ref|YP_002329520.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254782961|sp|B7USQ3|SYR_ECO27 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|215265161|emb|CAS09549.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 577

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGASVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A + ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|227329329|ref|ZP_03833353.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 576

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 125/617 (20%), Positives = 237/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALTAAGAPADSEAQ------IRQSAKAQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + ++   +   IAG GFIN++L   ++   + + + +          + 
Sbjct: 55  PRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAPKLG--LTPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDASARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     ++    D    E +Y            A K+  E  +F E     +VK      
Sbjct: 173 LEKMQNESASEMDLSDLEAFYRE----------AKKHYDEDADFAERARAYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +      ++ R + +  +  +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMTQNQI----NYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   ++++  L +  +    FD+  +    + 
Sbjct: 396 EAYDRALKLIAEKNPQMESDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A          +   ++    +  D  E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAG---------IQEDSLTQPITLNDEREFALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I +      P+ +  YLYDLA +F G + H         + A +  +   RL+L    A 
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILNAESDDVRQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+  +M
Sbjct: 560 TLKQGLDTLGIETVEKM 576


>gi|28493318|ref|NP_787479.1| arginyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|81437827|sp|Q83GE9|SYR_TROWT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28476359|gb|AAO44448.1| arginyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 552

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/592 (30%), Positives = 293/592 (49%), Gaps = 47/592 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +  D    + N +  +           + + + RP    +G  + +  + L+  L   
Sbjct: 1   MNV-EDLKKSVTNIVHSM-----YNFDCSEIVSLTRPPKPEYGDWALSLPLKLASLLKSP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            + IA+ I + +     V  V++A  GFINL LS  +   I+S ++  G  +GRN     
Sbjct: 55  AIDIAQSIASALLELDGVQDVYVAKPGFINLKLSREHTTGIISEVLEQGSSFGRNTTQSS 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+N+EFVS NPTGP+H+ H R A VGD++A ++   G +VTREYYIN+ G QI+  + S
Sbjct: 115 KKINLEFVSGNPTGPLHLAHTRWAAVGDSIARILINCGADVTREYYINNVGNQIHLFSES 174

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           V+ R           LP+  YPG Y+K + + +  ++   +++   E  + I +  S Q 
Sbjct: 175 VYARALSK------SLPKDGYPGEYVKDIARRIQCEF-PNIIDLSYEDAIKIFRKRSWQI 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSK 297
            ++ I+    A  +  D++ SE+  H  D    S I   +    + GY+++         
Sbjct: 228 QIEEIKKSCIAFRVNFDVWFSEESLHEPDRFGKSQIDKALARCKQNGYLFQ--------- 278

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                         R+T  GDD DR +L+SD SYTY+AAD AY+  K  RGF +++ ++G
Sbjct: 279 -------KNGAFFIRTTEFGDDKDRAVLRSDTSYTYYAADCAYYLNKINRGFSDLVILVG 331

Query: 358 SDHSGYVKRLEAVAAAVSEKKA----QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +DH GYVKR +A++             + VLL ++V L       + SKR G+ I L  +
Sbjct: 332 ADHHGYVKRFQAMSNIFHVDSENNRKNVQVLLGQMVLL----KNKRQSKREGNVIGLSEI 387

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +  VG D +RF          +D D   +K++S +NPV+YVQYAYAR RS+ R A ++  
Sbjct: 388 IQSVGVDPLRFWFCRYPIDTPIDLDEQHLKKRSNDNPVYYVQYAYARTRSLIRSA-NLLQ 446

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
              F  FP      E     +E  L+  L +Y  V+ +A    +P+++  YL  LA  +H
Sbjct: 447 MEKFGFFP------ELLVHETETALVSLLYDYKTVVIDAARFLQPHRVVRYLESLAGAYH 500

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   R  PR   +  +  +L   RL+L  AV  ++ + L++IGV +P  M
Sbjct: 501 KWYDKCRIIPRKGILDKSEAELVNTRLELNRAVGQVLYNALDLIGVSAPERM 552


>gi|320194410|gb|EFW69041.1| Arginyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 577

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTYLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|149195098|ref|ZP_01872190.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134811|gb|EDM23295.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 539

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 168/574 (29%), Positives = 303/574 (52%), Gaps = 55/574 (9%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           ++K + +   I +P+    GH +       ++    +P+  A+ +  ++K D   +SV  
Sbjct: 9   LKKHLGENPPINKPKQKEFGHYAVPI-FKYAKENKQNPIEFAKNLCEKLKCDE-FESVEP 66

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
              GF+N+ LS  +L    + ++     + ++   K   + +E++SANPTGP+H+GH R 
Sbjct: 67  LS-GFVNIKLSDKFLDDFANKVLEEKENFAKDE--KKESILLEYISANPTGPLHIGHARG 123

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           A+ GD L  +    GY++T EYY+NDAG QIN L LSV+   ++ L  N    P+ YY G
Sbjct: 124 AIFGDALTRIGRHIGYKITTEYYVNDAGRQINLLGLSVYLAAREILGLN-VTWPDEYYKG 182

Query: 204 VYLKHVGKELADKYSSELLNFP------EEKWLPIVKD-----YSVQAMMKIIRDDLKAL 252
            Y+K + K+  +++  +           E+K   I +D     ++   M++ I+ D+KAL
Sbjct: 183 EYIKDLAKDAIEEFGEDYFKKEVEIIQKEDKKEAIFEDERLSLWAKDKMLEEIKKDIKAL 242

Query: 253 NIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           N+   D ++SE   ++       ++   L +   +YE                   ++  
Sbjct: 243 NVIPFDNWVSERSLYKYW----DEVRTILEKNNALYE----------------KDGKIWL 282

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +S+   D+ DR +++ DG  TY A D+ Y   K++RG+D  I + G+DH GY+ R++A  
Sbjct: 283 KSSEYKDEKDRVVVREDGRPTYLAGDIIYHWDKFKRGYDRYINIWGADHHGYIARVKAAI 342

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             +   + ++ +LL ++V+L + G P KMSKRAG+FI +R VV++VG+D++RF+ L +K 
Sbjct: 343 KFLGFDERKLEILLSQMVKLLKGGEPYKMSKRAGNFILVRDVVEDVGADALRFVFLTKKA 402

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              L+FD   + ++   NP +YV YA+AR RSIFR       ++D+D        +    
Sbjct: 403 DTHLEFDVDDLNKEDSSNPNYYVNYAHARIRSIFRN-----KNIDYDDIKN---IELKNL 454

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E +L+    + P V+E+A   +EP++L  +L DLAS FH  ++        + + + 
Sbjct: 455 NEDEKELLFLALQLPYVLEDAFTNREPHRLTNFLIDLASEFHKFYNKN------KVIGSE 508

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++   RL+++  V SI+  GL+++G+ +   M
Sbjct: 509 KEEI---RLKILAVVGSILKLGLSLLGITAKERM 539


>gi|28572571|ref|NP_789351.1| arginyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81629852|sp|Q83HT0|SYR_TROW8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28410703|emb|CAD67089.1| arginyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 550

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 178/561 (31%), Positives = 285/561 (50%), Gaps = 41/561 (7%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + + RP    +G  + +  + L+  L    + IA+ I + +     V  V++A  GFINL
Sbjct: 24  VSLTRPPKPEYGDWALSLPLKLASLLKSPAIDIAQSIASALLELDGVQDVYVAKPGFINL 83

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS  +   I+S ++  G  +GRN      K+N+EFVS NPTGP+H+ H R A VGD++A
Sbjct: 84  KLSREHTTGIISEVLEQGSSFGRNTTQSSKKINLEFVSGNPTGPLHLAHTRWAAVGDSIA 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G +VTREYYIN+ G QI+  + SV+ R           LP+  YPG Y+K + +
Sbjct: 144 RILINCGADVTREYYINNVGNQIHLFSESVYARALSK------SLPKDGYPGEYVKDIAR 197

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD-- 269
            +  ++   +++   E  + I +  S Q  ++ I+    A  +  D++ SE+  H  D  
Sbjct: 198 RIQCEF-PNIIDLSYEDAIKIFRKRSWQIQIEEIKKSCIAFRVNFDVWFSEESLHEPDRF 256

Query: 270 -PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             S I   +    + GY+++                       R+T  GDD DR +L+SD
Sbjct: 257 GKSQIDKALARCKQNGYLFQ----------------KNGAFFIRTTEFGDDKDRAVLRSD 300

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA----QINVL 384
            SYTY+AAD AY+  K  RGF +++ ++G+DH GYVKR +A++             + VL
Sbjct: 301 TSYTYYAADCAYYLNKINRGFSDLVILVGADHHGYVKRFQAMSNIFHVDSENNRKNVQVL 360

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L       + SKR G+ I L  ++  VG D +RF          +D D   +K+
Sbjct: 361 LGQMVSL----KNKRQSKREGNVIGLSEIIQSVGVDPLRFWFCRYPIDTPIDLDEQHLKK 416

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +S +NPV+YVQYAYAR RS+ R A ++     F  FP      E     +E  L+  L +
Sbjct: 417 RSNDNPVYYVQYAYARTRSLIRSA-NLLQMEKFGFFP------ELLVHETETALVSLLYD 469

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           Y  V+ +A    +P+++  YL  LA  +H  +   R  PR   +  +  +L   RL+L  
Sbjct: 470 YKTVVIDAARFLQPHRVVRYLESLAGAYHKWYDKCRIIPRKGILDKSEAELVNTRLELNR 529

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV  ++ + L++IGV +P  M
Sbjct: 530 AVGQVLYNALDLIGVSAPERM 550


>gi|15831840|ref|NP_310613.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747906|ref|ZP_02772928.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757913|ref|ZP_02782920.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168770862|ref|ZP_02795869.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776574|ref|ZP_02801581.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783179|ref|ZP_02808186.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789744|ref|ZP_02814751.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801885|ref|ZP_02826892.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939580|ref|ZP_03084962.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208810380|ref|ZP_03252256.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816722|ref|ZP_03257842.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208818546|ref|ZP_03258866.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209395919|ref|YP_002270960.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|254793500|ref|YP_003078337.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227623|ref|ZP_05941904.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258211|ref|ZP_05950744.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|21542249|sp|Q8XCH2|SYR_ECO57 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238065087|sp|B5YR22|SYR_ECO5E RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13362054|dbj|BAB36009.1| arginine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768070|gb|EDU31914.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017552|gb|EDU55674.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999443|gb|EDU68429.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355181|gb|EDU73600.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360270|gb|EDU78689.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189370702|gb|EDU89118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376028|gb|EDU94444.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208724896|gb|EDZ74603.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731065|gb|EDZ79754.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738669|gb|EDZ86351.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209157319|gb|ACI34752.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209767330|gb|ACI81977.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767332|gb|ACI81978.1| arginine tRNA synthetase [Escherichia coli]
 gi|209767336|gb|ACI81980.1| arginine tRNA synthetase [Escherichia coli]
 gi|254592900|gb|ACT72261.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|320188575|gb|EFW63237.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320641730|gb|EFX11118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|326342254|gb|EGD66035.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343804|gb|EGD67566.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 577

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTHDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|300951499|ref|ZP_07165334.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956611|ref|ZP_07168890.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300316593|gb|EFJ66377.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449249|gb|EFK12869.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1]
          Length = 577

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVHFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|168762327|ref|ZP_02787334.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217328684|ref|ZP_03444765.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|189367334|gb|EDU85750.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217318031|gb|EEC26458.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
          Length = 577

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDHLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTHDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|283956573|ref|ZP_06374052.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791822|gb|EFC30612.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 530

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 166/561 (29%), Positives = 291/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFTLENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALANPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L +   +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKKHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKTIDDVMGADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAILSDAFEARALQKIPDYLKNLAANFHKFYNENKV-----IGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|193069866|ref|ZP_03050815.1| arginyl-tRNA synthetase [Escherichia coli E110019]
 gi|192956766|gb|EDV87220.1| arginyl-tRNA synthetase [Escherichia coli E110019]
          Length = 577

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L   +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHVQQALASDRLDVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYESLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAL-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|253688194|ref|YP_003017384.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511652|sp|C6DFD9|SYR_PECCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|251754772|gb|ACT12848.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 576

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 236/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALTAAGAPADSEAQ------IRQSAKAQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + ++   +   IAG GFIN++L   ++   + + + +          + 
Sbjct: 55  PRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAPKLG--LTPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     D    E +Y            A K+  +  +F E     +VK      
Sbjct: 173 LEKMQNENASEMDLSDLEAFYRE----------AKKHYDDDADFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +      ++ R + +  +  +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMTQNQI----NYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   ++++  L +  +    FD+  +    + 
Sbjct: 396 EAYDRALKLIAEKNPQMESDELSALAKVVSIGAIKYADLSKSRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A          +   ++    +  D  E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAG---------IQEDSLTQPITLSDEREFALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I +      P+ +  YLYDLA +F G + H         + A +  +   RL+L    A 
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILNAESDDVRQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+  +M
Sbjct: 560 TLKQGLDTLGIETVEKM 576


>gi|227111621|ref|ZP_03825277.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 576

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 238/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALTAAGAPADSEAQ------IRQSAKAQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + ++   +   IAG GFIN++L   ++   + + + +          + 
Sbjct: 55  PRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWIASQVENALNAPKLG--LTPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDASARTLAFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     ++    D    E +Y            A K+  E  +F E     +VK      
Sbjct: 173 LEKMQNESASEMDLSDLEAFYRE----------AKKHYDEDADFAERARAYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +      ++ R + +  +  +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMTQNQI----NYERLNVTLTKQDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   ++++  L +  +    FD+  +    + 
Sbjct: 396 EAYDRALKLIAEKNPQMESDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A          +   ++    +  D  E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAG---------IQEDSLTQPITLSDEREFALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I +      P+ +  YLYDLA +F G + H         + A +  +   RL+L    A 
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILNAESDDVRQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+  +M
Sbjct: 560 TLKLGLDTLGIETVEKM 576


>gi|82776478|ref|YP_402827.1| arginyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309789294|ref|ZP_07683885.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|109895035|sp|Q32H69|SYR_SHIDS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|81240626|gb|ABB61336.1| arginine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|308922829|gb|EFP68345.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 577

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 245/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    + ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHAERVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|157158431|ref|YP_001463181.1| arginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980181|sp|A7ZN02|SYR_ECO24 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157080461|gb|ABV20169.1| arginyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 577

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L   +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHVQQALASDRLDVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLLGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|218562787|ref|YP_002344566.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81549216|sp|Q9PNC0|SYR_CAMJE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112360493|emb|CAL35290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 530

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 167/561 (29%), Positives = 291/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIVDLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|157415439|ref|YP_001482695.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047154|sp|A8FMN1|SYR_CAMJ8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157386403|gb|ABV52718.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748081|gb|ADN91351.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932319|gb|EFV11262.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 530

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 165/561 (29%), Positives = 292/561 (52%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFTLENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALANPNDFSKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLILIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  V+DE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVIDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMRADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++ +A  A+   K+  YL +LA+ FH  ++   EN  +  +  N+       L+L  
Sbjct: 457 LKAILNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSINENDL------LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|332289781|ref|YP_004420633.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432677|gb|AEC17736.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 575

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 238/617 (38%), Gaps = 74/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +       + E       ++        G    N  M  ++ L + 
Sbjct: 1   MNIQTILSEKIKQAMIAAGADQQSEA------LVRPSSKAQFGDYQANGVMAAAKKLAMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +V  + +   ++ V IAG GFIN++L+P++L    + ++     +      K 
Sbjct: 55  PRDLAQKVVENLDLGEMIEKVEIAGPGFINIFLNPAWLATQTNKMLAD--HHFLIAPVKA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFVGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +   + +    E +Y            A K+  E   F E+    +VK      
Sbjct: 173 LEKMQNENASDMELSDLEAFYRE----------AKKHYDEDEVFAEKARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++ ++ R + +     +   +    +  GI+   ++K   
Sbjct: 223 YCRKMWRKL----VDITMKQNQRNYDRLNVTLTDKDVMGESLYNPMLPGIVADLEAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   ++F +      GD +   + K DG Y Y   D+A  K +YE    D ++Y  
Sbjct: 279 VKD-DGAVVVFLNEFKNKEGDPLGVIIQKKDGGYLYATTDIACAKYRYETLHADRILYFT 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S  S +++++  +          +        + L +D  P K   R G  + L  ++D
Sbjct: 338 DSRQSQHLQQVWLIVRKAGYVPESVTWDHFNFGMMLGKDNKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAEKLISEKSTNLSAEEQHQVAEVVGIGAVKYADLSKNRTTDYVFDWDNML-TFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF  +          + P+ +  +    D  E QL + L ++   
Sbjct: 455 NTAPYIQYAYTRIRSIFANSG---------IDPQQLAGEIQIKDDKERQLALTLLKFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ L  YLYDLA  F   + H         +     ++   RL+L    A 
Sbjct: 506 INTVVKEGTPHVLCAYLYDLAGAFSSFYEHC-------PILNQAEEVKQSRLKLAALTAK 558

Query: 569 IINSGLNIIGVESPNEM 585
           ++  GL+++G+++  +M
Sbjct: 559 VLKQGLDLLGIKTVEKM 575


>gi|261821364|ref|YP_003259470.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605377|gb|ACX87863.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 576

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 239/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      I +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALTAAGAPADSEAQ------IRQSAKAQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + ++   +   IAG GFIN++L   ++   + + + +          + 
Sbjct: 55  PRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAPKLG--LTPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  +AF G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLAFLGHDVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     ++    D    E +Y            A K+  E  +F E     +VK      
Sbjct: 173 LEKMQNESANEMDLSDLEAFYRE----------AKKHYDEDADFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +      ++ R + +  +  +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMTQNQI----NYERLNVTLTKQDVMGESLYNNMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   ++++  L +  +    FD+  +    + 
Sbjct: 396 EAYDRALKLIADKNPQMESDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      +  D   + +    +  D  E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAG-----IQEDTLTQPI----TLSDEREFALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I +      P+ +  YLYDLA +F G + H         + A    +   RL+L    A 
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILNAETDDVRQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+  +M
Sbjct: 560 TLKQGLDTLGIETVEKM 576


>gi|310767881|gb|ADP12831.1| arginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 576

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 236/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L  +      E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAVGAPADCEPQ------VRQSAKAQFGDYQANGIMAVAKNLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++ ++ +      V IAG GFIN++L+P +L   + S++ +          + 
Sbjct: 55  PRQLAEKVLEQLDLSGIAHKVEIAGPGFINIFLAPQWLSAQIDSVLRAPKLG--ISPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD  A  +AF G++V R  ++ D G Q   L   
Sbjct: 113 KTVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAF 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  +          E +Y            A +   E   F E     +VK      
Sbjct: 173 LEKQQNEHQETLALADLEAFYRE----------AKRTYDEDPAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YCRKMWKQLVDITMTQNQLI----YDRMNVTLARDDVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESDGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          I +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPENIPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIDRATRLVAEKNPDMPAGELKALANIVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A          +    V       +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAG---------IDAEAVSGTTRIIEDREAALAVRLLQFDET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A +      RL+L    A 
Sbjct: 506 ITQVARDGMPHVMCAYLYDLAGLFSGFYEHC------PILNAEDEATKQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+ +   M
Sbjct: 560 TLKQGLDTLGIATVERM 576


>gi|119487496|ref|ZP_01621106.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106]
 gi|119455665|gb|EAW36801.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106]
          Length = 585

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 136/606 (22%), Positives = 239/606 (39%), Gaps = 72/606 (11%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
            I      E    D +++    +   G    N AM L++ L  +P  IA  I+ +++I  
Sbjct: 15  AIVAAFGQEMAGTDPMLV-PTSNPKFGDYQCNVAMSLTKALKSNPRAIATQIIEKLEISD 73

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
             +   IAG GFINL L P YL   L++I+      G   +    KV ++F S N    M
Sbjct: 74  LCEPPEIAGPGFINLRLKPEYLEAQLNNILTD-ERLGIPTVDNPQKVIVDFSSPNIAKEM 132

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-- 194
           HVGH R  ++GD++A ++ F   +V R  ++ D G Q   L   +   Y +AL   D+  
Sbjct: 133 HVGHLRSTIIGDSIARVLEFLDDDVLRLNHVGDWGTQFGMLITYLREVYPEALTTADALD 192

Query: 195 --DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             DL   Y           E  +    E++              +   + +  R + + +
Sbjct: 193 IGDLVAFYRQAKVRFDEDNEFKEASRQEVVKLQAGAEDS---RRAWTILCEQSRREFQVI 249

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               DI + E      +   + +++ +L + G + E        +  +   +D  Q    
Sbjct: 250 YDLLDIQLKERGESFYNS-FLSEVVKDLEKTGLLEEN-------QGAKCVFLDGFQ---- 297

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVA 371
               G+ +   + KSDG Y Y   DLA  + +  +   D MIYV  S  + +  ++  VA
Sbjct: 298 -NKEGEALPLIVQKSDGGYNYATTDLAALRYRINQDQADRMIYVTDSGQANHFTQVWQVA 356

Query: 372 AAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
                   +++V+     + L  DG   K+  R+G+ + LR ++DE              
Sbjct: 357 RKAGWIPDEVDVIHVPFGLVLGEDGK--KLKTRSGETVRLRDLLDEAINRARKDLETRLK 414

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            VG  +V++  L +  +    F F K+    + N   Y+ YAY 
Sbjct: 415 EEGRTESKEFIENVAQVVGMSAVKYADLSQNRTSNYVFSFDKMLSL-QGNTAPYLLYAYV 473

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R + I R+ +        D        +    + +E  L  HL +   VIE   I   P 
Sbjct: 474 RIQGIRRKGE-------IDFKQVGTEAKMQLQEEAEFTLAKHLLQLNEVIETVAIELLPN 526

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L  YL++L+  F+  +           ++A + +  + RL L    A  +  GL+++G+
Sbjct: 527 RLCQYLFELSQKFNQFYDQC------PVLKAEDAQ-RISRLGLCDLTARTLKLGLSLLGI 579

Query: 580 ESPNEM 585
                M
Sbjct: 580 SVLERM 585


>gi|253989980|ref|YP_003041336.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639039|emb|CAR67652.1| arginyl-trna synthetase (ec 6.1.1.19) (arginine--trna ligase)
           (argrs) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781430|emb|CAQ84593.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 576

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 134/618 (21%), Positives = 237/618 (38%), Gaps = 75/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++ + L         E        I +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAILSEKVSHALIAAGAPTDSEA------HIRQSAKSQFGDYQANGVMAAAKKVGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V+ + +      V IAG GFIN++L  +++   + + +    E       K 
Sbjct: 55  PRQLAEKVVSLLDLQGIASKVEIAGPGFINIFLDKAWIAANVETALKD--EKLGITPVKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSV 238
           +   + + A     SDL   Y          +E A +  S ++     +++   +    +
Sbjct: 173 LEKVQNENASDMALSDLEAFYREAKKNYDEDEEFAVRARSYVVKLQGGDEYCRTMWRKLI 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   P  + D    L ++G   E       S
Sbjct: 233 DITMVQNQQTYDRLNVTLTRDSVMGESLYNDLLPGLVAD----LKQKGLAVE-------S 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D  +        G+ +   + K DG Y Y   D+A  K +YE    D ++Y 
Sbjct: 282 DGATVVYLDEYK-----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S    ++ +   +          +++      + L +DG P K   RAG  + L  ++
Sbjct: 337 IDSRQHQHLMQAWTIVRKAGYVPESVSLEHHMFGMMLGKDGKPFK--TRAGGTVRLTDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERANTLIREKNPDMPKDELKKVVEAVGIGAVKYADLSKSRTTDYIFDWDNML-AFE 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  SIF++A      +D +     VI  E      E  L   L ++  
Sbjct: 454 GNTAPYMQYAYTRVTSIFKRAG-----IDENSLTLPVILNE----EREQALATRLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I        P+ +  YLYDLA +F G + H +       + A +  L   RL+L    A
Sbjct: 505 TITTVAREGTPHVMCAYLYDLAGLFSGFYEHCQ------ILNAESEALRQSRLKLALLTA 558

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GLN +G+E+   M
Sbjct: 559 KTLKQGLNTLGIETVERM 576


>gi|50121444|ref|YP_050611.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81644856|sp|Q6D474|SYR_ERWCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49611970|emb|CAG75419.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 576

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 238/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALTAAGAPADSEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + ++   +   IAG GFIN++L   ++   + + + +          + 
Sbjct: 55  PRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWVASQVENALNAPKLG--LTPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G+ + R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNIIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     ++    D    E +Y            A K+  E  +F E     +VK      
Sbjct: 173 LEKMQNESANEMDLSDLEAFYRE----------AKKHYDEDADFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +      ++ R + +  +  +   +    +   I+   K+K   
Sbjct: 223 YCRQMWRKLVDITMTQNQI----NYERLNVTLTKQDVMGESLYNSMLPNIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   ++++  L +  +    FD+  +    + 
Sbjct: 396 EAYGRALKLIAEKNPQMESDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      +  D   + +    +  D  E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAG-----IQEDTLTQPI----TLNDEREFALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I +      P+ +  YLYDLA +F G + H         + A N  +   RL+L    A 
Sbjct: 506 ITSVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILNAENDDVRQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+ ++M
Sbjct: 560 TLKQGLDTLGIETVDKM 576


>gi|283832728|ref|ZP_06352469.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072410|gb|EFE10519.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 577

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 130/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   +              
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAQHVQQALTCDRLGVTQPA--K 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRD----------AKKHYDEDEAFAERARSYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMSQNQL----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D +        Q    +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDENALTNA---QVIIREDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LAVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENEEIRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|167844056|ref|ZP_02469564.1| arginyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 481

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 163/510 (31%), Positives = 256/510 (50%), Gaps = 58/510 (11%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           ++  G  +G +    G +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE
Sbjct: 1   MLAQGRAFGASERDHGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHRE 60

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYS 218
           +Y NDAG QI  LA+S   R +  L   D+  PE  Y G Y+  + ++       A    
Sbjct: 61  FYYNDAGVQIGNLAISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDG 119

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +    + + L  ++ ++V  + +    DLKA  ++ D +  E   +      +   +D
Sbjct: 120 EPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVD 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G  YE                    L  R+T  GDD DR + K+DG+YTYF  D+
Sbjct: 178 ALIAAGMTYE----------------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDV 221

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGM 396
           AY   K+ERGF  +I + GSDH G + R+ A    +     K   + +L ++V + RDG 
Sbjct: 222 AYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQ 281

Query: 397 PIKMSKRAGDFITLRHVVDE---------------------VGSDSVRFMMLWRKNSELL 435
            +K+SKRAG ++T+R +++                       G D+VRF ++ RK     
Sbjct: 282 EVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEF 341

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD     +Q+ ENPV+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     
Sbjct: 342 VFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QA 398

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + L+  LAEYP V+ +A     P+ +AFYL +LAS FH  ++  R       V  + +  
Sbjct: 399 MALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAP 451

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 452 RTARVALLAATRQVLENGLAMLGVSAPSKM 481


>gi|161502977|ref|YP_001570089.1| arginyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189083545|sp|A9MNC4|SYR_SALAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|160864324|gb|ABX20947.1| hypothetical protein SARI_01039 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLDPAFLAEQVQQALASDRLGVSQPAR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK  S  A
Sbjct: 173 LEKQQQENAGEMALADLEGFYRD----------AKKHYDEDEGFAERARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|294635811|ref|ZP_06714268.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090846|gb|EFE23407.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E       ++        G    N  M  ++ + + 
Sbjct: 1   MNIQALISDKVTQALVAAGAPADSEA------LVRPSAKVQFGDYQANGIMAAAKKMAMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +VA + +D     V IAG GFIN++L  ++L   + + +         +    
Sbjct: 55  PRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLADQVDAALADPRLGVARVA--P 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L  +
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLI-A 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              R Q      +  L +               A K+  E   F E     +VK      
Sbjct: 172 YLERVQSESQAGEMALAD--------LEAFYREAKKHYDEDAAFAERARGYVVKLQGGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + ++ +      ++ R + +   D +   +    +  GI+   K+K   
Sbjct: 224 YCREMWRKLVDITMRQNQ----RNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G + ++Y +
Sbjct: 280 T-ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYYI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 339 DSRQHQHLMQAWAIVRKAGYVPESVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 397 EATERAAKLIADKNPELSGDELKELVEVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      +D +     VI  E      E  L   L ++   
Sbjct: 456 NTAPYMQYAYTRVASIFKRAG-----IDENSLSGAVILTE----EREKALATRLMQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLY++A +F   +           + A++  +   RL+L    A 
Sbjct: 507 ILTVAREGTPHVMCAYLYEVAGLFSSFYEAC------PILNADDEHVRASRLKLAALTAR 560

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++   M
Sbjct: 561 TLKTGLDTLGIKTVERM 577


>gi|91211101|ref|YP_541087.1| arginyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117624028|ref|YP_852941.1| arginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218558741|ref|YP_002391654.1| arginyl-tRNA synthetase [Escherichia coli S88]
 gi|237705832|ref|ZP_04536313.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|123084447|sp|Q1RAQ8|SYR_ECOUT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232784|sp|A1AC37|SYR_ECOK1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701376|sp|B7MBT5|SYR_ECO45 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91072675|gb|ABE07556.1| arginine tRNA synthetase [Escherichia coli UTI89]
 gi|115513152|gb|ABJ01227.1| arginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218365510|emb|CAR03237.1| arginyl-tRNA synthetase [Escherichia coli S88]
 gi|226900589|gb|EEH86848.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294493402|gb|ADE92158.1| arginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307626641|gb|ADN70945.1| arginyl-tRNA synthetase [Escherichia coli UM146]
 gi|323952379|gb|EGB48252.1| arginyl-tRNA synthetase [Escherichia coli H252]
 gi|323956508|gb|EGB52250.1| arginyl-tRNA synthetase [Escherichia coli H263]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 247/617 (40%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G+   N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGNYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S        + + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGV--AMPEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|237731911|ref|ZP_04562392.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226907450|gb|EEH93368.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 236/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P +L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPVFLAQHVQQALASDRLGVTQPA--K 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRD----------AKKHYDEDEAFAERARSYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMSQNQL----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D          Q    +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDESALANA---QVVISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENEEIRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|57238047|ref|YP_179296.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81353486|sp|Q5HTT9|SYR_CAMJR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57166851|gb|AAW35630.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058607|gb|ADT72936.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 530

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 165/561 (29%), Positives = 291/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   ++ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---QENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VV+E+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|238762982|ref|ZP_04623949.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698740|gb|EEP91490.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 576

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 125/615 (20%), Positives = 239/615 (38%), Gaps = 69/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L                  + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAG------SEPQVRQSAKAQFGDYQANGVMAIAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++ ++ +D     + IAG GFIN++L   ++   +   + +     + +  + 
Sbjct: 55  PRQLAEKVIEQLNLDGIASKIEIAGPGFINIFLDRQWVASKVDEALKAPKLGVQPV--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHRVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N ++        G+    +  + A K   E   F +     +VK  S   
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  +D +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMAQNQIA----YDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   +++        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMS-------------- 401
            S    ++ +   +          + +      + L +DG P K                
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEA 397

Query: 402 -KRAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +RAG  I  ++          VVD VG  +V++  L +  +    FD+  +      N 
Sbjct: 398 IERAGKLIAEKNPDMPADELKQVVDAVGIGAVKYADLSKSRTTDYIFDWDNMLALD-GNT 456

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R  S+F++A      +D       ++  E      E  L   L ++  VI 
Sbjct: 457 APYMQYAYTRVVSVFKRAG-----IDESSLTLPLVITE----DREAALATRLLQFEEVIT 507

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P+ +  YLYDLA +F   + H +       + A + +    RL+L    A  +
Sbjct: 508 TVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEESRQSRLKLAMLTAKTL 561

Query: 571 NSGLNIIGVESPNEM 585
             GL+ +G+++   M
Sbjct: 562 KQGLDTLGIQTVERM 576


>gi|324113611|gb|EGC07586.1| arginyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 130/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAENVQQALKSDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMALADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+                      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIAEE--------ELAAAPVIIREDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F   + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSSFYEHC------PILSAENEEVRNSRLKLALLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|15802288|ref|NP_288313.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|12515938|gb|AAG56866.1|AE005410_2 arginine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 244/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTHDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIXKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEXT 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|224419223|ref|ZP_03657229.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253826941|ref|ZP_04869826.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142726|ref|ZP_07804919.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510347|gb|EES89006.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131757|gb|EFR49374.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 521

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 164/553 (29%), Positives = 287/553 (51%), Gaps = 49/553 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E+PRD   GH +       ++     P  IA+    +++  P++ S+ + G G++N +
Sbjct: 18  VLEQPRDKKFGHFAL-PTFSFAKSFKKSPQDIAQDFAKKLESLPEISSLNVVG-GYVNFF 75

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS  +L +     +       +     G K+ +E+VSANPTGP+H+GH R A++GD+L  
Sbjct: 76  LSDLFLEQCTQDFL-------KPHQKNGEKILLEYVSANPTGPLHIGHARGAILGDSLCR 128

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +    GY +T EYYINDAG+QI  L  S+++  +   +++  DLPEG Y G Y+  + KE
Sbjct: 129 IGRHLGYSITTEYYINDAGSQIENLGKSIYYAGRHLFFDDSYDLPEGCYKGEYILDLAKE 188

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             D +  E   F  EK++  +  +    M++ I+ +L    I  D F+SE + ++     
Sbjct: 189 AKDCFGIEC--FENEKFIEKLSLFGKDKMLEEIKSNLAEAGIVFDNFVSEKELYKQWDG- 245

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
               + +L     +Y+                   ++  +ST  GD+ +R +++ +G  T
Sbjct: 246 ---TLKSLESHNGIYK----------------QEGKIWIKSTEFGDEKNRVVVRENGEPT 286

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y K K+ER FD  I + G+DH GY++R++A    +     Q+ +LL ++V L 
Sbjct: 287 YLAGDIIYHKNKFERKFDRYINIWGADHHGYIQRVKAAIEFLGYDSNQLEILLSQMVALL 346

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           + G   KMSKRAG+FI ++ ++++VGSD++R + L ++    L+FD   +K+Q   NPV+
Sbjct: 347 KGGESYKMSKRAGNFILMKDIIEDVGSDALRLIFLSKRADTHLEFDIEDLKKQDSSNPVY 406

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA+AR  ++F ++      L  D          S    S   L+V      + +E++
Sbjct: 407 YINYAHARIHTLFSKSNYTLETLQKDF---------SNLSESLRDLLVLALNLSKTLEDS 457

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
            I + P K+  YL  L+S FH  ++        + +   N K     L ++  VA  +N+
Sbjct: 458 FIQRNPQKVVEYLRTLSSEFHRFYNEE------KILNTPNEKTI---LSVLSMVAQSLNA 508

Query: 573 GLNIIGVESPNEM 585
           GL+++GV++   M
Sbjct: 509 GLDLLGVKAKKSM 521


>gi|86153085|ref|ZP_01071290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843970|gb|EAQ61180.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 530

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKGLKKSPMLIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFAKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKTDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|218548565|ref|YP_002382356.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701420|sp|B7LPH0|SYR_ESCF3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218356106|emb|CAQ88723.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|325496983|gb|EGC94842.1| arginyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 577

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 130/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPTFLAENVQQALKSDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMALADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+                      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIAEE--------ELAAAPVIIREDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F   + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSSFYEHC------PILSAENEEVRNSRLKLALLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|148926180|ref|ZP_01809865.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845351|gb|EDK22444.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 530

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 165/561 (29%), Positives = 291/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +Y+                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYK----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VV+E+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|116327967|ref|YP_797687.1| arginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330848|ref|YP_800566.1| arginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281398|sp|Q04TG2|SYR_LEPBJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122284241|sp|Q052J1|SYR_LEPBL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116120711|gb|ABJ78754.1| Arginine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124537|gb|ABJ75808.1| Arginine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 586

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/613 (28%), Positives = 287/613 (46%), Gaps = 71/613 (11%)

Query: 7   FSSRLKNYLKE-----IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
               +   L+E     I     VEK  L RI IE  RD   G  ST+ ++  S+ L  +P
Sbjct: 7   LKQIVLKSLEEGVDSLIVSFPDVEKSSL-RIKIEYSRDEKFGDYSTSFSLENSKLLKRNP 65

Query: 62  LTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           + +++ +V  + K     + V     GF+N  +SPSYL + +   ++SG  + +  +   
Sbjct: 66  IQVSKELVEILQKRTDLFEKVDFTPPGFVNFKISPSYLLEYIEKSILSGDHFPK--VEHP 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+N+EFVSANPTGP+++   R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S
Sbjct: 124 LKINLEFVSANPTGPLNIVSARAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVS 183

Query: 181 VFWRYQQALYN-----------------NDSDLPEGYYPGVYLKHVGKELADKYSSE--- 220
              R ++                       + LP   Y G Y+K +   L ++       
Sbjct: 184 TLVRIREIKGEFSTRQEADDTTPIDTILEKNILPAEGYRGEYIKDIANALLNEPKKSSQI 243

Query: 221 ---LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
              L      +   +   ++V+  +   R DL +  ++ D +  E   H  +   +  ++
Sbjct: 244 ETLLKEKKYRELAELCSIWTVENNLDWQRKDLDSFGVEFDNYFRERTLH--ESDKVLAVM 301

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            +L R G ++E                +  + +FRST  GDD DR +++ DG  TY  AD
Sbjct: 302 KDLERVGKIFE----------------EDGKKIFRSTEYGDDKDRVVVRDDGRPTYLLAD 345

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY K K ERG+D +  + G DH GY+ RL      +  KK    V++ + V L   G  
Sbjct: 346 IAYHKDKIERGYDRIYDIWGPDHHGYISRLSGAVQTLGYKKENFKVIISQQVNLLESGQK 405

Query: 398 IKMSKRAGDFITLRHVV---DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           +KMSKRAG F T+  ++    + G D  R+  + R     LDFD    ++QS +NPVFY+
Sbjct: 406 VKMSKRAGSFQTMSDLIGFLGKHGKDVGRYFFVMRSLDAPLDFDLDLAQDQSDKNPVFYL 465

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR  SIFR         +          +  E      +L+  +A +P  I ++  
Sbjct: 466 QYAHARICSIFR---------EVGTESSAEAAESLEMSEERKRLLFWIARFPEEIFDSAN 516

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT--MMRLQLVHAVASIINS 572
           + EP+++A YL   A  F G +       +   ++    ++   + R+ L  A  S++  
Sbjct: 517 SMEPHRVANYLQSFAKAFTGFY-----LGKNNRLKDATPEVRLGLARICL--AARSVLAE 569

Query: 573 GLNIIGVESPNEM 585
           GL +IGV +P +M
Sbjct: 570 GLGLIGVSAPEKM 582


>gi|296101787|ref|YP_003611933.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056246|gb|ADF60984.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 577

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 131/618 (21%), Positives = 237/618 (38%), Gaps = 74/618 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +        IAG GFIN++L P++L   + + + S          + 
Sbjct: 55  PRQLAEQVLTHLDLTGIASKTEIAGPGFINIFLEPAFLASHVDAALKSDRLGVAQP--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDP 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +       ++R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFLEMWRKLVDITMSQNQL----TYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAKHLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            S    ++ +   +            +   +  +  L +DG P K   RAG  + L  ++
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDCVPLEHHMFGM-MLGKDGKPFK--TRAGGTVKLSDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +    +
Sbjct: 395 DEALERARRLVAEKNPDMPAEELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFE 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  S+FR+A     ++D  +     +      +  E QL   L ++  
Sbjct: 454 GNTAPYMQYAYTRVLSVFRKA-----NIDESVLANATVT---ITEDREAQLAARLLQFEE 505

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +        P+ +  YLYDLA +F G + H         + A N  +   RL+L    A
Sbjct: 506 TLSVVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENESVRNSRLKLAQLTA 559

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+ +G+E+   M
Sbjct: 560 KTLKLGLDTLGIETVERM 577


>gi|156933540|ref|YP_001437456.1| arginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166232785|sp|A7MEC0|SYR_ENTS8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|156531794|gb|ABU76620.1| hypothetical protein ESA_01360 [Cronobacter sakazakii ATCC BAA-894]
          Length = 577

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 135/617 (21%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKAQFGDYQANGVMAIAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AE  +A + +        IAG GFIN++L P++L K + + V S    G   +   
Sbjct: 55  PRQFAEQALAHLDLTGIAAKTEIAGPGFINIFLDPAFLAKNIEAAVASD-RAGVEKVSAP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 114 QTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 174 LEKQQQENAGEMALSDLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 224 YCREMWRKLVDITMTQNQI----TYQRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 280 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  I L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 397 EALDRARRLVAGKNPDMPADELEKLANAVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     +L   +            D  E QL   L ++   
Sbjct: 456 NTAPYMQYAYTRVLSVFRKAGVKESELTAPVV---------IQDDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A    L   RL+L    A 
Sbjct: 507 LGVVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILTAETDALRQSRLKLALLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|45657950|ref|YP_002036.1| arginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45601191|gb|AAS70673.1| arginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 596

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 167/604 (27%), Positives = 284/604 (47%), Gaps = 65/604 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  +  +       +K   +I IE  RD   G  ST+ A+  S+ L  +P+ +++ +V 
Sbjct: 25  LEESVNSLISSFPEVEKEAFKIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVE 84

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
            + K     + V     GF+N  +S S+L   + + V+SG  + +  +    K+N+EFVS
Sbjct: 85  ILQKRTDLFEKVDFTPPGFVNFRISTSFLLNYIETSVLSGNYFPKVDL--PLKINLEFVS 142

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+++   R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R ++  
Sbjct: 143 ANPTGPLNIVSARAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELK 202

Query: 190 YNNDSD-----------------LPEGYYPGVYLKHVGKELADKYSSE------LLNFPE 226
               +                  LP   Y G Y+K +   L             L     
Sbjct: 203 GEEGTQQETTDDTPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKY 262

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           ++   +   ++++  +   R DL A  ++ D + SE   H  +   +  ++ +L + G +
Sbjct: 263 KELAELCAVWTIENNLIWQRKDLDAFGVEFDCYFSERTLH--EADKVLSVMKDLEKSGKI 320

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           ++                +  + +FRST  GDD DR +++ DG  TY  AD+AY K K E
Sbjct: 321 FQ----------------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIE 364

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG+D +  + G DH GY+ RL     ++  KK    V++ + V L   G  +KMSKRAG 
Sbjct: 365 RGYDKIYDIWGPDHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGS 424

Query: 407 FITLRHVV---DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           F T+  ++    + G D  R+  + R     LDFD    K++S +NPVFY+QYA+AR  S
Sbjct: 425 FQTMSDLIGFLGKHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICS 484

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IF++  D        +          E      +L+  +A +P  I ++  A EP+++  
Sbjct: 485 IFKEVGDQTSKEAAAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTN 535

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLT--MMRLQLVHAVASIINSGLNIIGVES 581
           YL   A  F   +       +   ++  ++++   + R+ L  A  +++  GL +IGV +
Sbjct: 536 YLQSFAKAFTSFY-----LAKDNRLKDASKEVRLGLARICL--AAKNVLAEGLKLIGVSA 588

Query: 582 PNEM 585
           P  M
Sbjct: 589 PERM 592


>gi|188533617|ref|YP_001907414.1| arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691998|sp|B2VJB6|SYR_ERWT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188028659|emb|CAO96521.1| Arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 576

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 238/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++ + +  +      E +      + +      G    N  M +++ +G+ 
Sbjct: 1   MNIQALLSEKVSHAMIAVGAPADCEPQ------VRQSAKAQFGDYQANGMMAVAKKMGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++ ++ +      V IAG GFIN++L+  +L   +  ++ +       +  K 
Sbjct: 55  PRQLAEKVLEQLDLSGIAAKVEIAGPGFINIFLAQEWLSAQIDGVLTAPKLGVAPVAPK- 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD  A  + F G++V R  ++ D G Q   L   
Sbjct: 114 -TVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLEFLGHKVIRANHVGDWGTQFGMLI-- 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F   QQ+ ++    L +               A +   E   F E     +VK      
Sbjct: 171 AFLEKQQSEHHEAIALAD--------LEAFYREAKRTYDEDPAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YCRKMWKQLVDVTMTQNQLI----YDRMNVTLTRDDVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIRKKDGGYLYTTTDIACAKYRYETLKADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          I +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSIPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVDRATKLVAEKNPDMPADELNALANIVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A          +    V       D  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAG---------IDAEAVSGVTRIVDDREAALAVRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A +      RL+L    A 
Sbjct: 506 ITQVARDGMPHVMCAYLYDLAGLFSGFYEHC------PILNAEDEATKQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKQGLDTLGIETVERM 576


>gi|146312088|ref|YP_001177162.1| arginyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987303|sp|A4WBN1|SYR_ENT38 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145318964|gb|ABP61111.1| arginyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 577

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 242/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AEL++  + ++   + V IAG GFIN++L P++L   + + + S          K 
Sbjct: 55  PRQLAELVLTHLDLNGIANKVEIAGPGFINIFLDPAFLASHVDAALKSERLGVAQP--KA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 ETIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAF 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRE----------AKKHYDEDAAFAERARSYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       ++R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMSQNQLA----YNRLNVTLTRDDVMGESLYNPMLPGIVADLKAKKLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPAEELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     ++D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----NIDESALANAAV---VITEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A+N +    RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILSADNEEARNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|322832419|ref|YP_004212446.1| arginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167620|gb|ADW73319.1| arginyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 577

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 129/619 (20%), Positives = 244/619 (39%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQSLLSEKVSQALIAAGASADSEAQ------VRQSAKAQFGDYQANGVMSVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +    + V IAG GFIN++L P+++   + S +    E       + 
Sbjct: 55  PRQLAEKVVELLDLSGIANKVEIAGPGFINIFLDPAFVAAHVDSALND--EKLGITPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD       F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +   + + A   N +DL E Y          +  A++    ++       L    +Y +Q
Sbjct: 173 LEKVQNENAGDMNLADLEEFYRAAKKNYDEDEAFAERARGYVVK------LQGGDEYCLQ 226

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              K++   +K   +          ++R + +   D +   +    +  GI+   ++K  
Sbjct: 227 MWRKLVDVTMKQNQLT---------YNRLNVTLTEDDVMGESLYNSMLPGIVSDLQAKGL 277

Query: 300 QKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              D +   +++        GD +   + K DG Y Y   D+A  K +YE  G D ++Y 
Sbjct: 278 A-VDSEGAVVVYLDEYKNKEGDPMGVIIRKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S    ++ +   +A         + +      + L +DG P K   R+G  + L  ++
Sbjct: 337 IDSRQHQHLMQAWTIARKAGYVPDSVALEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLL 394

Query: 415 DE----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           DE                            VG  ++++  L +  +    FD+  +    
Sbjct: 395 DEAIDRARKLITEKNPEMKDTGELEKLVNAVGIGAIKYADLSKSRTTDYIFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF++A     D+D +   + V+  E      E  L   L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFKRA-----DIDVNSLTQPVVLSE----EREAALATRLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+        P+ +  YLYD+A +F   + H         + A +      RL+L    
Sbjct: 505 EVLTVVAREGTPHTMCAYLYDVAGLFSSFYEHC------PILNAEDETSRNSRLKLALLT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
              + +GL+ +G+E+   M
Sbjct: 559 QRTLKTGLDTLGIETVERM 577


>gi|302393768|sp|Q72QL1|SYR_LEPIC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 586

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 167/604 (27%), Positives = 284/604 (47%), Gaps = 65/604 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  +  +       +K   +I IE  RD   G  ST+ A+  S+ L  +P+ +++ +V 
Sbjct: 15  LEESVNSLISSFPEVEKEAFKIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVE 74

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
            + K     + V     GF+N  +S S+L   + + V+SG  + +  +    K+N+EFVS
Sbjct: 75  ILQKRTDLFEKVDFTPPGFVNFRISTSFLLNYIETSVLSGNYFPKVDL--PLKINLEFVS 132

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+++   R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R ++  
Sbjct: 133 ANPTGPLNIVSARAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELK 192

Query: 190 YNNDSD-----------------LPEGYYPGVYLKHVGKELADKYSSE------LLNFPE 226
               +                  LP   Y G Y+K +   L             L     
Sbjct: 193 GEEGTQQETTDDTPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKY 252

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           ++   +   ++++  +   R DL A  ++ D + SE   H  +   +  ++ +L + G +
Sbjct: 253 KELAELCAVWTIENNLIWQRKDLDAFGVEFDCYFSERTLH--EADKVLSVMKDLEKSGKI 310

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           ++                +  + +FRST  GDD DR +++ DG  TY  AD+AY K K E
Sbjct: 311 FQ----------------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIE 354

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG+D +  + G DH GY+ RL     ++  KK    V++ + V L   G  +KMSKRAG 
Sbjct: 355 RGYDKIYDIWGPDHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGS 414

Query: 407 FITLRHVV---DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           F T+  ++    + G D  R+  + R     LDFD    K++S +NPVFY+QYA+AR  S
Sbjct: 415 FQTMSDLIGFLGKHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICS 474

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IF++  D        +          E      +L+  +A +P  I ++  A EP+++  
Sbjct: 475 IFKEVGDQTSKEAAAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTN 525

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLT--MMRLQLVHAVASIINSGLNIIGVES 581
           YL   A  F   +       +   ++  ++++   + R+ L  A  +++  GL +IGV +
Sbjct: 526 YLQSFAKAFTSFY-----LAKDNRLKDASKEVRLGLARICL--AAKNVLAEGLKLIGVSA 578

Query: 582 PNEM 585
           P  M
Sbjct: 579 PERM 582


>gi|315124642|ref|YP_004066646.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018364|gb|ADT66457.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 530

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/561 (29%), Positives = 289/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     + V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFELVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFKALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|311279226|ref|YP_003941457.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748421|gb|ADO48173.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 577

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 136/617 (22%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +++ + ++     V IAG GFIN++L P++L   + + + S            
Sbjct: 55  PRQLAEQVLSHLDLNGIASKVEIAGPGFINIFLDPAFLASHVDAALASDRLGVAKQP--A 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD       F G++V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSAPNVAKEMHVGHVRSTIIGDASVRTQEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALSDLEGFYRD----------AKKHYDEDEAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +    E    R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YCREMWRKLVDITMTQNQITYE----RLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEAMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALDRARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKSRTTDYIFDWDLML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A       +  L    VI  E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAGIE----ESALASAAVIISE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A++  +   RL+L    A 
Sbjct: 507 LTVVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILSADSEAVRNSRLKLALLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|62180486|ref|YP_216903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168241540|ref|ZP_02666472.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449121|ref|YP_002045963.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|75482759|sp|Q57N89|SYR_SALCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238693639|sp|B4T808|SYR_SALHS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|62128119|gb|AAX65822.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194407425|gb|ACF67644.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205339146|gb|EDZ25910.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|322714962|gb|EFZ06533.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 577

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S  A
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|121613183|ref|YP_001000850.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166232774|sp|A1W0F9|SYR_CAMJJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|87249269|gb|EAQ72230.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 530

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/561 (29%), Positives = 290/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     + V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFELVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+ + I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQVKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|204930959|ref|ZP_03221785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320003|gb|EDZ05208.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 577

 Score =  438 bits (1128), Expect = e-120,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTL-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S  A
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPNMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|167892559|ref|ZP_02479961.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 481

 Score =  438 bits (1128), Expect = e-120,   Method: Composition-based stats.
 Identities = 162/510 (31%), Positives = 255/510 (50%), Gaps = 58/510 (11%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           ++  G  +G +      +V +EFVSANPTGP+HVGH R A +GD LA+++A  GY V RE
Sbjct: 1   MLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHRE 60

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYS 218
           +Y NDAG QI  LA+S   R +  L   D+  PE  Y G Y+  + ++       A    
Sbjct: 61  FYYNDAGVQIGNLAISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDG 119

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +    + + L  ++ ++V  + +    DLKA  ++ D +  E   +      +   +D
Sbjct: 120 EPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVD 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G  YE                    L  R+T  GDD DR + K+DG+YTYF  D+
Sbjct: 178 ALIAAGMTYE----------------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDV 221

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGM 396
           AY   K+ERGF  +I + GSDH G + R+ A    +     K   + +L ++V + RDG 
Sbjct: 222 AYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQ 281

Query: 397 PIKMSKRAGDFITLRHVVDE---------------------VGSDSVRFMMLWRKNSELL 435
            +K+SKRAG ++T+R +++                       G D+VRF ++ RK     
Sbjct: 282 EVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEF 341

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD     +Q+ ENPV+YVQYA+AR  S+  + K  +   D  L   ++ P +S+     
Sbjct: 342 VFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QA 398

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + L+  LAEYP V+ +A     P+ +AFYL +LAS FH  ++  R       V  + +  
Sbjct: 399 MALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAP 451

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R+ L+ A   ++ +GL ++GV +P++M
Sbjct: 452 RTARVALLAATRQVLENGLAMLGVSAPSKM 481


>gi|305431795|ref|ZP_07400962.1| arginine--tRNA ligase [Campylobacter coli JV20]
 gi|304444879|gb|EFM37525.1| arginine--tRNA ligase [Campylobacter coli JV20]
          Length = 530

 Score =  438 bits (1128), Expect = e-120,   Method: Composition-based stats.
 Identities = 170/561 (30%), Positives = 290/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P++IA  + A+ +     D V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELRKSPISIANELAAKFQEHSYFDKVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  LS ++L ++ +  + +  E+ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  LNGYLNFRLSKTFLNELANKALQNPNEFSKGE-DKTESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|168462557|ref|ZP_02696488.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195634216|gb|EDX52568.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 577

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S  A
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|270262239|ref|ZP_06190511.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044115|gb|EFA17207.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 576

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 239/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQVLLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMSVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      V IAG GFIN++L+  ++ + +  ++ +          K 
Sbjct: 55  PRQLAEKVVQLLDLGDIASKVEIAGPGFINIFLNGEWVAQQVDQVLNAPKLG--IAPVKQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A    F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +   +      E +Y            A K+  E   F E     +VK      
Sbjct: 173 LEKMQNENASDMGLSDLEQFYRE----------AKKHYDEDAEFAERARAYVVKLQGGDQ 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +       ++R + +   D +   +    +   I+   K+K   
Sbjct: 223 YCLKMWRKLVDITMAQNQL----TYNRLNVTLTEDDVMGESLYNAMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGMMLGKDGKPFK--TRAGGTVRLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIDRAGKLIAEKNPDMPAEEMQHLANVVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F++A      LD +     ++  E      E+ L   L ++  V
Sbjct: 455 NTAPYMQYAYTRVASVFKRAG-----LDENSLTLPLVMTE----EREIALATRLLQFEEV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H +       + A++ +    RL+L    A 
Sbjct: 506 ITTVARDGTPHVMCTYLYDLAGLFSGFYEHCQ------ILNADSEEARQSRLKLALLTAR 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++   M
Sbjct: 560 TLKTGLDTLGIDTVERM 576


>gi|290475235|ref|YP_003468121.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174554|emb|CBJ81348.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 576

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 238/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++ N L E       E        + +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQVILSEKISNALIEAGAPTDSEA------HVRQSAKAQFGDYQANGVMAAAKKVGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +++++ +      + IAG GFIN++L  +++   + + +    E       + 
Sbjct: 55  PRQLAEKVISQLDLQGIASKIEIAGPGFINIFLDKAWIAANIETALKD--EKLGITPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N D++         + +      A K+  E   F       +VK      
Sbjct: 172 ----YLEKIQNEDANDMALADLEAFYRE-----AKKHYDEDEEFAIRARNYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++  ++R + +     +   +    +  GI+   K +   
Sbjct: 223 YCREMWRKL----VDITMSQNQQTYNRLNVTLTEKDVMGESLYNDMLPGIVADLKQRGIA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
               D   +++        G+ +   + K DG Y Y   D+A  K ++E      ++Y  
Sbjct: 279 -VKSDGATVVYLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRHETLNASRVLYYT 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+        A  +       + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIIRKTGYIPASMLLEHHMFGMMLGKDGKPFK--TRAGGTVRLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERADTLIREKNPDMPEDELKKIVEAVGIGAVKYADLSKSRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A     D+D +     V+  E      E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVSSIFKRA-----DIDENNLTLPVMLNE----EREQALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A++ +L   RL+L    A 
Sbjct: 506 ITTVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILNADSEELRQSRLKLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++   M
Sbjct: 560 TLKQGLDTLGIQTVERM 576


>gi|168820735|ref|ZP_02832735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|197248879|ref|YP_002146112.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238912513|ref|ZP_04656350.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|238690037|sp|B5F3I0|SYR_SALA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197212582|gb|ACH49979.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205342662|gb|EDZ29426.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320085472|emb|CBY95253.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322616909|gb|EFY13817.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618147|gb|EFY15039.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625818|gb|EFY22637.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626270|gb|EFY23080.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632684|gb|EFY29429.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639028|gb|EFY35721.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640468|gb|EFY37121.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646023|gb|EFY42540.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649555|gb|EFY45987.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655463|gb|EFY51771.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660242|gb|EFY56480.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662923|gb|EFY59130.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668108|gb|EFY64267.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674132|gb|EFY70226.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675514|gb|EFY71588.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683072|gb|EFY79088.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686766|gb|EFY82744.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195343|gb|EFZ80523.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199235|gb|EFZ84330.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204040|gb|EFZ89055.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207491|gb|EFZ92439.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210677|gb|EFZ95555.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217475|gb|EGA02194.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221966|gb|EGA06356.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224424|gb|EGA08712.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231497|gb|EGA15610.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235939|gb|EGA20018.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240509|gb|EGA24552.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245401|gb|EGA29401.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250172|gb|EGA34064.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253620|gb|EGA37448.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323260282|gb|EGA43903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266873|gb|EGA50359.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269079|gb|EGA52535.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 577

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASERLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S  A
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|238788535|ref|ZP_04632328.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723448|gb|EEQ15095.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 576

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/622 (20%), Positives = 239/622 (38%), Gaps = 83/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAGSEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +D     V IAG GFIN++L   ++   +   + +          + 
Sbjct: 55  PRQLAEKVIELLDLDGIASKVEIAGPGFINIFLDRQWVASKVEHALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F +     +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQGGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y  Q   K++   +    I +D         R + +  +D +   +    +  GI+   K
Sbjct: 223 YCRQMWRKLVDITMAQNQIAYD---------RLNVTLTKDDVMGESLYNAMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + D   +++        G+ +   + K DG Y Y   D+A  K +YE  G D 
Sbjct: 274 AKGLA-VESDGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           ++Y + +    ++ +   +          + +      + L +DG P K   R+G  + L
Sbjct: 333 VLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKL 390

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 391 SDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNML 450

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QYAY R  SIF++A      +D +     ++  E      E  L   L 
Sbjct: 451 ALD-GNTAPYMQYAYTRVVSIFKRAG-----IDENSLTLPLVITE----DREAALATRLL 500

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++  VI        P+ +  YLYDLA +F   + H +       + A + +    RL+L 
Sbjct: 501 QFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEESRQSRLKLA 554

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+++   M
Sbjct: 555 MLTAKTLKQGLDTLGIQTVERM 576


>gi|320539876|ref|ZP_08039535.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030062|gb|EFW12082.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 576

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 240/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++   L         E +      + +      G+   N  M  ++ LG+ 
Sbjct: 1   MNIQVLLSDKVNQALIAAGAPADCEAQ------VRQSAKAQFGNYQVNGVMSAAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  +++      V IAG GFIN++L+ ++L + +   V++  E G   + + 
Sbjct: 55  PRQLAEKVLQLLELGDIASKVEIAGPGFINIFLNSAWLARQI-DWVLNAPELGVTAV-EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +   +      E +Y            A K+  E   F       +VK      
Sbjct: 173 LEKMQNENASDMGLSDLEQFYR----------QAKKHYDEDSEFAARARAYVVKLQGGDP 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       ++R + +     +   +    +  GI+   K+K   
Sbjct: 223 YCQKMWRKLVDITMAQNQL----TYNRLNVTLTEGDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   DLA  K +YE  G + ++Y  
Sbjct: 279 -VESEGATVVFLDEYQNKDGEPMGVIIQKKDGGYLYTTTDLACAKYRYETLGANRVLYYT 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          +++      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVSLEHHLFGMMLGKDGKPFK--TRAGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERAGQLIAGKNPHMPAQEITQLARVVGIGAVKYSDLSKSRTTDYIFDWNNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F++A      +D       ++  E      E+ L   L ++   
Sbjct: 455 NTAPYMQYAYTRIVSVFKRAG-----IDESSLTLPLVMSE----EHEIALATRLLQFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLY+LA +F   + H +       +  ++  +   RL+L    + 
Sbjct: 506 LTAVAREGTPHIMCSYLYELAGLFSSFYEHCQ------ILNGDSEAVRQSRLKLALLTSR 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+E+   M
Sbjct: 560 TLKTGLDTLGIETVERM 576


>gi|293395793|ref|ZP_06640075.1| arginine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421730|gb|EFE94977.1| arginine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 576

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 239/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMSVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      V IAG GFIN++L+P+++ +   + + +          + 
Sbjct: 55  PRQLAEKVVQLLDLGDIATKVEIAGPGFINIFLTPAWVAQHADAALRAPKLG--IAPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A    F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHVRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +          E +Y            A K+  E   F E     +VK      
Sbjct: 173 LEKMQNENASEMGLSDLEQFYRE----------AKKHYDEDAQFAERARGYVVKLQGGDQ 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +  +    ++R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCLGMWRKLVNITMAQNQLV----YNRLNVTLTEDDVMGESLYNAMLPGIVEDLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   R+G  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRSGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERAAKLIAEKNPDMPADELNKVVNAVGIGAVKYADLSKSRTTDYIFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F++A      +D +     ++  E      E+ L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASVFKRAG-----VDENALTLPLVMTE----EREIALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F   + H +       + A++      RL+L    A 
Sbjct: 506 LTVVAREGTPHVMCSYLYDVAGLFSSFYEHCQ------ILNADSEAARQSRLKLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++   M
Sbjct: 560 TLKTGLDTLGIDTVERM 576


>gi|86150808|ref|ZP_01069024.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841978|gb|EAQ59224.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 530

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 166/561 (29%), Positives = 289/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     + V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFELVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|16760859|ref|NP_456476.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141449|ref|NP_804791.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|21542251|sp|Q8Z5V7|SYR_SALTI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|25293290|pir||AI0744 arginine-tRNA ligase (EC 6.1.1.19) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503156|emb|CAD05660.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137076|gb|AAO68640.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 577

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 130/617 (21%), Positives = 236/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDETFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|238751578|ref|ZP_04613068.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710140|gb|EEQ02368.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 576

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 128/628 (20%), Positives = 237/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAGSEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +D    +V IAG GFIN++L   ++   +   + +          + 
Sbjct: 55  PRQLAEKVIELLDLDGIASNVEIAGPGFINIFLDRQWVASKVEQALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F +     +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQGGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    I +D           + E  ++   P     I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVMGESLYNSMLPG----IVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + +    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRVLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+F++A      +D +     ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFKRAG-----IDENSLTLPLVITE----DREAA 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  VI        P+ +  YLYDLA +F   + H         + A N +   
Sbjct: 495 LATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEHC------PILNAENEESRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|292488556|ref|YP_003531440.1| arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899728|ref|YP_003539097.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199576|emb|CBJ46693.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553987|emb|CBA21032.1| Arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172701|emb|CBX80957.1| Arginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 576

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 235/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +  +               + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMVAVGAPAD------SEPQVRQSAKAQFGDYQANGIMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++ ++ ++     V IAG GFIN++L+P +L   + S++ +          + 
Sbjct: 55  PRQLAEKVLEQLDLNGIAHKVDIAGPGFINIFLAPQWLSAQIDSVLTAPKLG--VSPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD  A  +AF G++V R  ++ D G Q   L   
Sbjct: 113 ETVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  +          E +Y            A +   E   F       +VK  S   
Sbjct: 173 LEKQQNEHHEAIALADLEAFYRE----------AKRTYDEDPAFAARARGYVVKLQSGDR 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  RD +   +    +   I+   K+K   
Sbjct: 223 YCRKMWKQLVDITMTQNQLI----YDRMNVTLTRDDVMGESLYNDMLPAIVSDLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          I +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSIPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVDRAAKLVAVKNPDMPADELAALANIVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A          +    V       +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAG---------IDAEAVGGTTRIIEDREAALAVRLLQFDET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A +      RL+L    A 
Sbjct: 506 ITQVARDGMPHVMCAYLYDLAGLFSGFYEHC------PILNAEDDATRQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKQGLDTLGIETVERM 576


>gi|200390366|ref|ZP_03216977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856570|ref|YP_002243221.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238690436|sp|B5R142|SYR_SALEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|199602811|gb|EDZ01357.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|206708373|emb|CAR32677.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|260767651|ref|ZP_05876586.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617160|gb|EEX42344.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPTGSPAA------VRQSAKPQFGDYQANGVMGVAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +              
Sbjct: 55  PREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADERLGVAKEAQ-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R QQ       +L +               + K   E   F E     +VK     A
Sbjct: 173 L-ERVQQESGEVSMELSD--------LEAFYRESKKLYDEDAEFAERARNYVVKLQGGDA 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  RD +   +    +  GI+   K K   
Sbjct: 224 FCLDMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKEKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
           + D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 QED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +         ++ +      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEERAKALIESKNPDLGADEKADIATTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF +A     +L  D+            +  E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVASIFAKAGVSPDNLTGDI---------KITEEKEKALIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++ +   +P+ L  YL++LA  F   +           + A +  +   RL+L    A 
Sbjct: 507 VQSVSREGQPHILCSYLFELAGQFSSFYEAC------PILIAEDESVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+++   M
Sbjct: 561 TIKQGLSLLGIKTLERM 577


>gi|205352385|ref|YP_002226186.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690484|sp|B5R8C8|SYR_SALG2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|205272166|emb|CAR37024.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627437|gb|EGE33780.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLSEQVQQALTSDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|194443417|ref|YP_002041175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|238693529|sp|B4SVG0|SYR_SALNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194402080|gb|ACF62302.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|117617648|ref|YP_858536.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117559055|gb|ABK36003.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 581

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 128/611 (20%), Positives = 240/611 (39%), Gaps = 66/611 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  +  +     +   +  R+ ++R ++ AHG L+TN AM+L++P   +P  +A 
Sbjct: 5   IHHLLEQTVANLKSAGVLPADLEARVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +     +  V IAG GFIN +  PS+L   + ++V S     +  +     V ++
Sbjct: 65  AIIEHLPASDLIAKVEIAGPGFINFFFDPSWLAGQVEAMVASANANVKLPV--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    M V H R  V+GD  A  + F G++V R  +I D G Q   L   +     
Sbjct: 123 YSAPNVAKEMAVHHIRSTVLGDVAARALEFLGHKVVRANHIGDWGTQFGMLIAYLEKMAN 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +   + +    E +Y            A ++  E   F E     +VK        + + 
Sbjct: 183 EHASDMELRDLEAFYT----------QAKRHYDEDEAFAERARNYVVKLQGGDEYCRTMW 232

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L    +   +  ++ ++ R + S     I   +    +   I+   K++     + + 
Sbjct: 233 KKL----VDMTMEQNQRNYDRLNVSLTNKDIMGESMYNDMLPEIVADLKARGLA-VESEG 287

Query: 307 KQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
             ++F        G+ +   + KSDG + Y   D+A  K +YE  G D ++Y + S    
Sbjct: 288 ATVVFLDEYKNKDGEPMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQ 347

Query: 363 YVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           ++ +   +          + +      + L +DG P K   R+G  + L  +++E     
Sbjct: 348 HLMQAWTITRKAGYVPESVPLEHHAFGMMLGKDGRPYK--TRSGGTVKLVELLNEAEERA 405

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 +   +V++  L +  +    FD+  +    + N   Y+
Sbjct: 406 SALLESRNSDLSAEEKAQVVHAIAMGAVKYADLSKNRTTDYIFDWDLMLSF-EGNTAPYL 464

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R +SIFR+A      +D D    +VI  E     +E  L   L ++   +     
Sbjct: 465 QYAYTRIQSIFRKAG-----VDADTLSGHVILNE----EAEEVLAQKLIQFSDAVNGVAD 515

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ L  YLY+L+  F   +     N         +      RL L  A A ++  GL
Sbjct: 516 KGMPHLLCTYLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCAATAKVLKLGL 570

Query: 575 NIIGVESPNEM 585
            ++G+ +   M
Sbjct: 571 GVLGIHTLERM 581


>gi|56413172|ref|YP_150247.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362098|ref|YP_002141735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|213163291|ref|ZP_03349001.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426390|ref|ZP_03359140.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|81361941|sp|Q5PMZ2|SYR_SALPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238690743|sp|B5BH46|SYR_SALPK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56127429|gb|AAV76935.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093575|emb|CAR59038.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 130/617 (21%), Positives = 236/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|294827929|ref|NP_711869.2| arginyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|302393769|sp|Q8F5J3|SYR_LEPIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|293385774|gb|AAN48887.2| arginyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 586

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 167/604 (27%), Positives = 284/604 (47%), Gaps = 65/604 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  +  +       +K   +I IE  RD   G  ST+ A+  S+ L  +P+ +++ +V 
Sbjct: 15  LEESVNSLISSFPEVEKETFKIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVE 74

Query: 71  RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
            + K     + V     GF+N  +S S+L   + + V+SG  + +  +    K+N+EFVS
Sbjct: 75  ILQKRTDLFEKVDFTPPGFVNFRISTSFLLNYIETSVLSGNYFPKVDL--PLKINLEFVS 132

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+++   R A  GDT+ASL+   G+ V +E+YIND G Q+  L +S   R ++  
Sbjct: 133 ANPTGPLNIVSARAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELK 192

Query: 190 YNNDSD-----------------LPEGYYPGVYLKHVGKELADKYSSE------LLNFPE 226
               +                  LP   Y G Y+K +   L             L     
Sbjct: 193 GEEGTQQETTDDTPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKY 252

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           ++   +   ++++  +   R DL A  ++ D + SE   H  +   +  ++ +L + G +
Sbjct: 253 KELAELCAVWTIENNLIWQRKDLDAFGVEFDRYFSERTLH--EADKVLSVMKDLEKSGKI 310

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           ++                +  + +FRST  GDD DR +++ DG  TY  AD+AY K K E
Sbjct: 311 FQ----------------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIE 354

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RG+D +  + G DH GY+ RL     ++  KK    V++ + V L   G  +KMSKRAG 
Sbjct: 355 RGYDKIYDIWGPDHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGS 414

Query: 407 FITLRHVV---DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           F T+  ++    + G D  R+  + R     LDFD    K++S +NPVFY+QYA+AR  S
Sbjct: 415 FQTMSDLIGFLGKHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICS 474

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           IF++  D        +          E      +L+  +A +P  I ++  A EP+++  
Sbjct: 475 IFKEVGDQTSKEATAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTN 525

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLT--MMRLQLVHAVASIINSGLNIIGVES 581
           YL   A  F   +       +   ++  ++++   + R+ L  A  +++  GL +IGV +
Sbjct: 526 YLQSFAKAFTSFY-----LAKDNRLKDASKEVRLGLARICL--AAKNVLAEGLKLIGVSA 578

Query: 582 PNEM 585
           P  M
Sbjct: 579 PERM 582


>gi|86150379|ref|ZP_01068605.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839204|gb|EAQ56467.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|284926399|gb|ADC28751.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 530

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 166/561 (29%), Positives = 289/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     + V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFELVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|161613533|ref|YP_001587498.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|197263437|ref|ZP_03163511.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|189083546|sp|A9MUA9|SYR_SALPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|161362897|gb|ABX66665.1| hypothetical protein SPAB_01253 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197241692|gb|EDY24312.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|16765251|ref|NP_460866.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994213|ref|ZP_02575305.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|325530298|sp|E1WGF0|SYR_SALTS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|325530299|sp|P0CL51|SYR_SALTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|16420446|gb|AAL20825.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327860|gb|EDZ14624.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247079|emb|CBG24900.1| ArgRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993894|gb|ACY88779.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158429|emb|CBW17938.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912903|dbj|BAJ36877.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321224552|gb|EFX49615.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323130193|gb|ADX17623.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988802|gb|AEF07785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 577

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A       +  L    VI  E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKANID----EQALASAPVIISE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|183598986|ref|ZP_02960479.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827]
 gi|188021202|gb|EDU59242.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827]
          Length = 576

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 125/617 (20%), Positives = 239/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   ++                ++ +      G    N  M  ++ +G++
Sbjct: 1   MNIQAILSDKISAAMQAAGAPEG------SDALVRQSAKAQFGDYQANGVMGAAKKMGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV+ + ++     V IAG GFIN++L PS+L   +   +        ++  K 
Sbjct: 55  PRQLAEQIVSHLDLEGIASKVEIAGPGFINIFLEPSWLTTQVEQALTCDRLGLSSV--KS 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  + F G++V R  ++ D G Q   L   
Sbjct: 113 ETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N ++          + +      A ++      F E     +VK  S   
Sbjct: 172 ----YLEKMQNENASDMALADLEEFYRE-----AKQHYDSDEVFAERARGYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +     + + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCRKMWRKLVDITMQQNQ----ETYRRLNVTLTEDDVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
             + +   +++     T  G+ +   + K DG + Y   D+A  K ++E    D  +Y +
Sbjct: 279 -VESEGATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDIACAKYRHEVLHADRALYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPESMSLEHHMFGMMLGKDGKPFK--TRSGGTVRLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERAQVLIRSKNPDMPEDELNNVANVVGIGSVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A     DL   +            D  E+ L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKKANVTQADLTLPIV---------LQDPREIALATRLMQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   + H         + A +      RL+L      
Sbjct: 506 ILMVARDGTPHVMCAYLYDLAGLFSSFYEHC------PILSAEDEAQRQSRLKLALLTQK 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++   M
Sbjct: 560 TLKAGLDTLGIDTVERM 576


>gi|317048536|ref|YP_004116184.1| arginyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950153|gb|ADU69628.1| arginyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 576

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 232/617 (37%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +      +  E +      + +      G    N  M +++ LG  
Sbjct: 1   MNIQALLSDKVGQAMIAAGAPVDCEPQ------VRQSAKVQFGDYQANGIMAVAKKLGQA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L   +L    +  +        ++    
Sbjct: 55  PRQLAEQVIQHLDLQGIASKVEIAGPGFINIFLDRQWLADQAAQALTLPRLGVSSVA--A 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLI-- 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            +   QQ+ ++ D  L +               A +   E   F E     +VK      
Sbjct: 171 AYLEKQQSEHHEDIALAD--------LEAFYREAKRTYDEDEAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  +    + R + +  R  +   +    +  GI+   K K   
Sbjct: 223 YCRTMWKKLVDITMSQNQKV----YDRLNVTLTRKDVMGESLYNDMLPGIVADLKEKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
               +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 VI-SEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++++   +          + +      + L +DG P K   R+G  I L  ++D
Sbjct: 338 DSRQHQHLQQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGRPFK--TRSGGTIKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERALALVSEKNPEMSSDELQALAEVVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A      L  ++            +  E QL   L ++  V
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAGIAADSLQGEIV---------LSEEREAQLATRLLQFEDV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A   ++   RLQL    A 
Sbjct: 506 ITQVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILTAEEEQVRNSRLQLAALTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++   M
Sbjct: 560 TLKQGLDTLGIKTVERM 576


>gi|168234027|ref|ZP_02659085.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468774|ref|ZP_03074758.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455138|gb|EDX43977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331975|gb|EDZ18739.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 577

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASDRLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F       +VK  S  A
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAARARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPNMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|153952342|ref|YP_001397729.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166232773|sp|A7H2J9|SYR_CAMJD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152939788|gb|ABS44529.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 530

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 165/561 (29%), Positives = 290/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     +SV  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMFIASDLASKFQNHDCFESVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V G+TL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGNTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSAVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIYQVFAKAGKKIDDVMGADLQS--------LNQDGINLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|168238541|ref|ZP_02663599.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194737429|ref|YP_002114945.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238689771|sp|B4TYT3|SYR_SALSV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194712931|gb|ACF92152.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288679|gb|EDY28054.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 577

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASERLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|126656792|ref|ZP_01728006.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622012|gb|EAZ92720.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 585

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 146/619 (23%), Positives = 253/619 (40%), Gaps = 77/619 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + +L    +E   K   E+       +   RD  HG    N A+ L++ LG +P  IA+
Sbjct: 4   INEQLIQGFQEALVKSFGEEFKEIDPQVTTARDLRHGDYQANIALPLAKKLGKNPREIAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +I+  + ++   +S  I G GFINL L  SYL   L+S+  +    G   +    KV ++
Sbjct: 64  IIINNLSLNNICESPTIGGPGFINLRLKSSYLESQLTSLYQNQ-RLGIKKVENADKVIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD +A  + F GY+V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGDWGTQFGMLITYLKEVYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYSV 238
            AL   D+ L  G     Y +      A K   E   F E     +VK          + 
Sbjct: 183 DALTKADA-LEIGDLVNFYKQ------AKKRFDEDPKFQEAARDAVVKLQSGDKESLQAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q +    R + + +  + ++ ++E      +P  + D+I  L +QG +        K + 
Sbjct: 236 QLLCDQSRREFQKIYDRLNVQLTERGESFYNPY-LDDVIKALDKQGIL-------EKDQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
            Q   ++       +   GD +   + KSDG Y Y   DLA  + +  E     +IYV  
Sbjct: 288 AQCVFLEG-----FTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDKAKRIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  S +  ++  VA   +     + V       L +     K+  R+G+ + L+ ++DE 
Sbjct: 343 AGQSNHFAQVFQVAEKANFLPDTVEVTHVPFG-LVKGEDGKKLKTRSGETVKLKDLLDEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG  +V++  L +       F + K+    
Sbjct: 402 VNYARKDLENRLQSEERQESAAFINHVSETVGISAVKYADLSQNRISDYIFSYDKMLAL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAYAR +SI R+      ++D++    N+     E   +E++L  +L +  
Sbjct: 461 QGNTAPYMLYAYARIQSISREG-----NIDYENLGENITILLKE--ETEIELGKYLLQLS 513

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I+       P +L  YLY+L+  F+  + +    P L+    ++  +   RL L    
Sbjct: 514 ETIKEVEKTLLPNRLCDYLYELSKKFNRFYENC---PVLK----SDEPVKTSRLLLCDLT 566

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+     M
Sbjct: 567 ARTLKLGLSLLGISVLERM 585


>gi|167552453|ref|ZP_02346206.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168259814|ref|ZP_02681787.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|198246204|ref|YP_002215175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|238690367|sp|B5FSM1|SYR_SALDC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197940720|gb|ACH78053.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205322924|gb|EDZ10763.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205351086|gb|EDZ37717.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|326622923|gb|EGE29268.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 577

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASERLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDT 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|238754848|ref|ZP_04616198.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706859|gb|EEP99226.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 577

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/615 (20%), Positives = 238/615 (38%), Gaps = 68/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADSEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +VA + ++     V IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAEKVVALLDLEGISSKVEIAGPGFINIFLDRQWIAEKVEYALTAPKLG--IAPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD  A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N ++        G+    V    A K+  E   F       +VK      
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLEVFYREAKKHYDEDEAFAARARAYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  +D +   +    +  GI+   K+K   
Sbjct: 223 YCRAMWRKLVDITMAQNQI----SYDRLNVTLTQDDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMS-------------- 401
            S    ++ +   +          + +      + L +DG P K                
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEA 397

Query: 402 -KRAGDFITLR----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +RAG  I  +           VV+ VG  +V++  L +  +    FD+  +      N 
Sbjct: 398 IERAGKLIAEKNPDMPANELAEVVNAVGIGAVKYADLSKSRTTDYVFDWDNMLALD-GNT 456

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R  S+F++A  +          R++       +  E  L   L ++   I 
Sbjct: 457 APYMQYAYTRVVSVFKRAGVVDE--------RSLTLPLVITEEREAALATRLLQFEETIT 508

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           N      P+ +  YLYD+A +F   + H +       + A++ +    RL+L    A  +
Sbjct: 509 NVAREGTPHVMCAYLYDVAGLFSSFYEHCQ------ILNADSEESRQSRLKLAMLTAKTL 562

Query: 571 NSGLNIIGVESPNEM 585
             GL+ +G+++   M
Sbjct: 563 KQGLDTLGIQTVERM 577


>gi|262041990|ref|ZP_06015172.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259040688|gb|EEW41777.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 577

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 136/622 (21%), Positives = 248/622 (39%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +++ + ++   + V IAG GFIN++L P++L   ++  + S  E       + 
Sbjct: 55  PRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAFLADNVNRALQS--ERLGVTKPQA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
           +  + Q+    N  ++      G Y +      A K+  E   F E     +VK     +
Sbjct: 173 LEKQQQE----NSGEMALADLEGFYRE------AKKHYDEDEAFAERARSYVVKLQGGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y +Q   K++   +    I +D         R + +  RD +   +    +  GI+   K
Sbjct: 223 YFLQMWRKLVDITMSQNQITYD---------RLNVTLTRDDVMGESLYNPMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D 
Sbjct: 274 AKGLA-VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          + +      + L +DG P K   RAG  + L
Sbjct: 333 VLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKL 390

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 391 ADLLDEALERARRLVAEKNPDMSADELENLAKVVGIGAVKYADLSKNRTTDYVFDWDNML 450

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  S+FR+A     D +  +    VI      +  E QL   L 
Sbjct: 451 -AFEGNTAPYMQYAYTRVLSVFRKAG---IDENAMIDAPVVIA-----EDREAQLAARLL 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +        P+ +  YLYDLA +F G + H         + A + +    RL+L 
Sbjct: 502 QFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESEETRNSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+E+   M
Sbjct: 556 LLTAKTLKLGLDTLGIETVERM 577


>gi|260598357|ref|YP_003210928.1| arginyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217534|emb|CBA31733.1| Arginyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 577

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSARAQFGDYQANGVMAIAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AE  +A + +        IAG GFIN++L P++L K + + V S    G   +   
Sbjct: 55  PRQFAEQALAHLDLTGIAAKTEIAGPGFINIFLDPAFLAKNVEAAVASD-RAGVEKVSAP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 114 QTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + ++          EG+Y            A K+  E   F E     +VK      
Sbjct: 174 LEKQQKENAGEMALSDLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDD 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 224 YCRDMWRKLVDITMTQNQI----TYQRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 280 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  I L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 397 EALDRARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     +L   +            D  E QL   L ++   
Sbjct: 456 NTAPYMQYAYTRVLSVFRKAGVSESELTAPVV---------IQDDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A    L   RL+L    A 
Sbjct: 507 LGVVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILSAETDALRQSRLKLALLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|259908205|ref|YP_002648561.1| arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963827|emb|CAX55329.1| Arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478133|emb|CAY74049.1| argS [Erwinia pyrifoliae DSM 12163]
          Length = 576

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 236/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +  +      E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAVGAPADCEPQ------VRQSAKAQFGDYQANGIMAVAKNLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++ ++ +      V IAG GFIN++L+P +L   + S++ +          + 
Sbjct: 55  PRQLAEKVLEQLDLSGIAHKVDIAGPGFINIFLAPQWLSAQIDSVLTAPKLG--ISPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD  A  +AF G++V R  ++ D G Q   L   
Sbjct: 113 KTVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAF 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  +          E +Y            A +   E   F E     +VK      
Sbjct: 173 LEKQQNEHQETLALADLEAFYRE----------AKRTYDEDPAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YCRKMWKQLVDITMTQNQLI----YDRMNVTLARDDVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          I +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPENIPLEHHMFGMMLGKDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIDRATRLVAEKNPDMPAGELKALANIVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A          +    V       +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAG---------IDAEAVSGTTRIIEDREAALAVRLLQFDET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A +      RL+L    A 
Sbjct: 506 ITQVARDGMPHVMCAYLYDLAGLFSGFYEHC------PILNAEDEATKQSRLRLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+ +   M
Sbjct: 560 TLKQGLDTLGIATVERM 576


>gi|88596555|ref|ZP_01099792.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88191396|gb|EAQ95368.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 530

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 165/561 (29%), Positives = 289/561 (51%), Gaps = 43/561 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     + V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFELVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNEM 585
            VA  I +  +++G+E+ N+M
Sbjct: 508 LVALSIKTAFSLMGIEAKNKM 528


>gi|300723081|ref|YP_003712379.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629596|emb|CBJ90199.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 576

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/618 (20%), Positives = 237/618 (38%), Gaps = 75/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++ + L         E        + +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAILSDKISHALIAAGAPAGSEA------HVRQSAKAQFGDYQANGVMAAAKKVGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++   L + +              
Sbjct: 55  PRQLAEKVVGLLDLQGIASKIEIAGPGFINIFLDKDWIATHLETALKDKKLG--ISPVNP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MH+GH R  ++GD  A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKQMHIGHIRSTIIGDAAARTLEFLGHNVIRANHLGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSV 238
           +   + + A     +DL E Y          +E A +  S ++     +++   +    V
Sbjct: 173 LEKVQNENASDMALADLEEFYREAKKTYDEDEEFAIRARSYVVRLQGGDEYCRTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   ++    LN+       + E  ++      + D++ +L ++G   E       S
Sbjct: 233 DITMSQNQETYNRLNVTLTEKDMMGESLYN----DMLPDVVADLKQKGLAVE-------S 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
                  +D  +        G+ +   + K DG Y Y   D+A  K ++E    D ++Y 
Sbjct: 282 DGATVVYLDEYK-----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRHEVLHADRVLYY 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S    ++ +   +          +++      + L +DG P K   RAG  + L  ++
Sbjct: 337 IDSRQHQHLMQAWTIVRKAGYIPESLSLEHHMFGMMLGKDGKPFK--TRAGGTVKLSDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERADTLIREKNPDMPEDELKKVIEAVGIGAVKYADLSKSRTTDYVFDWDNML-AFE 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  SIF++A     ++D     + VI  E      E  L   L ++  
Sbjct: 454 GNTAPYMQYAYTRVNSIFKRA-----EIDESSLTQPVILNEG----REQTLATRLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I        P+ +  YLYDLA +F G + H         + A++ ++   RL+L    A
Sbjct: 505 TITTVAREGTPHVMCSYLYDLAGLFSGFYEHC------PILNADSEEIRQSRLKLALLTA 558

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL  +G+++   M
Sbjct: 559 KTLKQGLETLGIQTVERM 576


>gi|283785614|ref|YP_003365479.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949068|emb|CBG88673.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 577

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 135/622 (21%), Positives = 243/622 (39%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S  E     I + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAENVQQALNS--ERLGVAIPEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
           +  + Q+          EG+Y            A K+  E   F E     +VK     +
Sbjct: 173 LEKQQQENAGEMALADLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y +Q   K++   +    I +D         R + +  RD +   +    +  GI+   K
Sbjct: 223 YFLQMWRKLVDITMSQNQITYD---------RLNVTLTRDDVMGESLYNPMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D 
Sbjct: 274 AKGLA-VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          + +      + L +DG P K   RAG  + L
Sbjct: 333 VLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKL 390

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 391 ADLLDEALERARRLVAEKNPDMSADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML 450

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  S+FR++      LD        +      +  E QL   L 
Sbjct: 451 -AFEGNTAPYMQYAYTRVLSVFRKSG-----LDESALAAAPV---ILREDREAQLAARLL 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +        P+ +  YLYD+A +F G + H         + A N ++   RL+L 
Sbjct: 502 QFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDEVRNSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+E+   M
Sbjct: 556 LLTAKTLKLGLDTLGIETVERM 577


>gi|268589751|ref|ZP_06123972.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314906|gb|EFE55359.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 576

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 236/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +                 ++ +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAILSDKISAAMLAAGAPED------SDALVRQSAKAQFGDYQANGVMGAAKKMGIA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + ++     V IAG GFIN++L P+++ K +   + S          K 
Sbjct: 55  PRQLAEQLVNHLDLEGIASKVEIAGPGFINIFLEPAWVEKHVEEALASQRLG--IAPVKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A    F G++V R  ++ D G Q   L   
Sbjct: 113 ETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N D+          + +      A K+  E   F       +VK  S   
Sbjct: 172 ----YLEKVQNEDATDMALADLEEFYRE-----AKKHYDEDEEFAVRARGYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +     + + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMQQNQ----ETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG + Y   D+A  K +YE    D  +Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPESMALEHHMFGMMLGKDGKPFK--TRTGGTVRLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAQALIREKNPDMPEDELLNVANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A         +L   ++    S  D  E+ L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKKA---------NLTHADLTLPISLQDPREIALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLY+LA +F G + H         + A++      RL+L      
Sbjct: 506 ILTVARDGTPHVMCAYLYELAGLFSGFYEHC------PILSADDEAQRQSRLKLAALTQK 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+E+   M
Sbjct: 560 TLKTGLDTLGIETVERM 576


>gi|197284974|ref|YP_002150846.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693143|sp|B4ETN5|SYR_PROMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194682461|emb|CAR42387.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 576

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 129/617 (20%), Positives = 237/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +                 ++ +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAFLSEKISMAMSAAGAPAD------SEPLVRQSAKVQFGDYQANGVMGAAKKMGIP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+  + I    D V IAG GFIN++LSP ++ +     +    E+        
Sbjct: 55  PRQLAEKILEHLDITDIADKVEIAGPGFINIFLSPVWVAQQAEFALAD--EHLNITKVTP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD  A  ++F G+ V R  ++ D G Q   L   
Sbjct: 113 ETIVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRANHLGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  +   +      E +Y            A K   E   F E     +V+      
Sbjct: 173 LEKKQNENAADMALADLEEFYRE----------AKKCYDEDEVFAERARNYVVRLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +       + R + +   D I   +    +  GI+   K+K   
Sbjct: 223 YCRTMWRKLVDITMQQNQL----TYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K ++E+   + ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRHEQLHANRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPDSMSLEHHMFGMMLGKDGRPFK--TRSGGTVRLTDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAHERALTLIREKNPDMDEEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A     D+D     + +    S     E QL + L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRA-----DIDESALTQPI----SLTQPHEKQLALRLVQFDET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA  F G + +         + A +  +   RL+L    A 
Sbjct: 506 ITQVAREGTPHVMCAYLYDLAQSFSGFYENC------PILSAEDDNVRQSRLKLARLTAR 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL  +G+E+ + M
Sbjct: 560 TLKQGLETLGIETVDRM 576


>gi|315453935|ref|YP_004074205.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132987|emb|CBY83615.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 535

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 170/569 (29%), Positives = 291/569 (51%), Gaps = 41/569 (7%)

Query: 20  CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
            K  +E+ +  +IV+E P+D + GH ++  A  L++     P  IAE +V  +K +    
Sbjct: 5   IKGVLERLLDTKIVLEHPKDKSLGHYASVVAFSLAKERRKAPKIIAEELVQFLKQEQVCQ 64

Query: 80  SVFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
            VF    A  G++N  L  S+L ++ +  +  G ++GRN++       IEFVSANPTGP+
Sbjct: 65  EVFASISALNGYLNFTLKESFLDELCNQALSLGKDFGRNILESKKSYYIEFVSANPTGPL 124

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+ GD+L  L  F G +   EYY+ND GAQI+ L LSV+ R Q+ +     + 
Sbjct: 125 HIGHARGAIFGDSLCRLGRFLGVKTHAEYYVNDMGAQIHMLGLSVYLRIQE-MRGAQVEY 183

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P   Y G Y+  + ++  + + +  L   EE  +  + +++ + M+  I++ L    I  
Sbjct: 184 PPNAYKGDYITELAQKALEHFGA--LEGEEEALIAQLGNFAKELMLAEIQETLAETGICM 241

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +ISE        S    +   L   G VYE                   ++   S+  
Sbjct: 242 DAYISEKAMF----SAQERVFTRLQEAGGVYES----------------EGKMWLASSQK 281

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR L KSD ++TY A D+ Y   K+++ +D+ I + G+DH GYV R++A    +  
Sbjct: 282 GDEKDRVLKKSDSTFTYIAGDITYHDYKFQQNYDHYINIFGADHHGYVARIKAALEFLGY 341

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +  ++ VLL ++V L ++G P KMSKRAG+F+ L+ V+ ++G D++RF+ L +K    L+
Sbjct: 342 ESQRLEVLLVQMVALLQEGKPYKMSKRAGNFVLLKDVLQDIGKDALRFVFLSKKLDTHLE 401

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD   +++Q   NP+FY+ YA AR  ++  +      +          +P          
Sbjct: 402 FDVASLQKQDSSNPIFYIHYANARIHTLMSKFLQRGNEQAIYASSLCNLP------PVAT 455

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+      P+V+ +A + +E  K+  YL +LA  FH  ++  R       +    ++L 
Sbjct: 456 HLLFSALNLPKVLVSAFVDRELQKICEYLKNLAGDFHAFYNAHR-------ILETPQELP 508

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L+L   V+  +  GL+++G+E+  +M
Sbjct: 509 Y--LKLCQMVSLSLTIGLSMLGIEAKKKM 535


>gi|123442647|ref|YP_001006624.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166200587|sp|A1JRM9|SYR_YERE8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122089608|emb|CAL12457.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 576

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 126/628 (20%), Positives = 238/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L                  + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAG------SEPQVRQSAKAQFGDYQANGVMAIAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +D     V IAG GFIN++L   ++   +   + +     + +  + 
Sbjct: 55  PRQLAEKVIELLDLDGIASKVEIAGPGFINIFLDRQWVASKVEEALKAPKLGVQPV--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F +     +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    I +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVMGESLYNTMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+F++A      +D       ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFKRAG-----IDESNLTLPLVITE----DREAA 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYDLA +F   + H +       + A++ +   
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNADSEESRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|149191128|ref|ZP_01869387.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835056|gb|EDL52034.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 577

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 129/633 (20%), Positives = 233/633 (36%), Gaps = 104/633 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K     +        +   + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQADEALTDARLGVAS--QEQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178
             +  ++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L   
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIAN 172

Query: 179 -----------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                            L  F+R  + LY+ D++  E     V     G E         
Sbjct: 173 LERVQQESGEVSMELSDLEAFYRESKKLYDEDAEFAERARGYVVKLQGGDE--------- 223

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             F  E W  +V    +Q      R     +++  D  + E  ++   P  ++D    L 
Sbjct: 224 --FCAEMWKKLVDVTMIQNQRNYDRL---NVSLTRDDVMGESMYNDMLPGIVQD----LK 274

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G   E           Q   +D  +        G+ +   + K DG + Y   D+A  
Sbjct: 275 EKGLAVE-------DDGAQVVFLDEYK-----NKDGEPMGVIIQKRDGGFLYTTTDIACA 322

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIK 399
           K +YE+ G D ++Y + S    ++++   +           ++      + L +DG P K
Sbjct: 323 KYRYEKLGADRVLYFIDSRQHQHLQQAWTIVRKAGYVPESTSLEHHAFGMMLGKDGRPFK 382

Query: 400 MSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNS 432
              RAG  + L  ++DE                           V   +V++  L +  +
Sbjct: 383 --TRAGGTVRLADLLDEAVERATALIESKNPELDAEEKANIANTVAMAAVKYADLSKHRT 440

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD+  +    + N   Y+QYAY R  SIF +A     +L  D+            D
Sbjct: 441 TDYVFDWDNML-AFEGNTAPYMQYAYTRVASIFAKAGVSMDELSGDI---------KITD 490

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L+  L ++   +++     +P+ +  YL++LA  F   +           + A +
Sbjct: 491 EKEKALVAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILIAED 544

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL+L    A  I  GL ++G+E+   M
Sbjct: 545 ESVKQSRLKLAALTAKTIQQGLELLGIETLERM 577


>gi|323255049|gb|EGA38837.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
          Length = 577

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 130/617 (21%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASERLGVSQPTR-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+   +      EG+Y            A K+  E   F E     +VK  S  A
Sbjct: 173 LEKQQQENAGDMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQSGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG   ++  RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDG--NRLKTRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|238792571|ref|ZP_04636204.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728206|gb|EEQ19727.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 576

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 126/620 (20%), Positives = 240/620 (38%), Gaps = 79/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADSEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAEKVIELLDLSGIASKVEIAGPGFINIFLDRQWVAEKVEHALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F +     +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFAQRARAYVVKLQGGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y  Q   K++   +    I +D         R + +  +D +   +    +  GI+   K
Sbjct: 223 YCRQMWRKLVDITMAQNQIAYD---------RLNVTLTKDDVMGESLYNAMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + +   +++        G+ +   + K DG Y Y   D+A  K +YE  G D 
Sbjct: 274 AKGLA-VESEGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMS--------- 401
           ++Y + +    ++ +   +          + +      + L +DG P K           
Sbjct: 333 VLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLAD 392

Query: 402 ------KRAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                 +RAG  I  ++          VVD VG  +V++  L +  +    FD+  +   
Sbjct: 393 LLDEAIERAGKLIAEKNPDMPADELKQVVDAVGIGAVKYADLSKSRTTDYIFDWDNMLAL 452

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYAY R  S+F++A      +D       ++  E      E  L   L ++
Sbjct: 453 D-GNTAPYMQYAYTRVVSVFKRAG-----IDESNLTLPLVITE----DREAALATRLLQF 502

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             VI        P+ +  YLYDLA +F   + H +       + A + ++   RL+L   
Sbjct: 503 EEVITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEEIRQSRLKLAML 556

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+ +G+++   M
Sbjct: 557 TAKTLKQGLDTLGIQTVERM 576


>gi|290508794|ref|ZP_06548165.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289778188|gb|EFD86185.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 577

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 137/622 (22%), Positives = 248/622 (39%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +++ + ++   + V IAG GFIN++L P++L   ++  + S  E       + 
Sbjct: 55  PRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAFLADNVNRALQS--ERLGVTKPQA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
           +  + Q+    N S++      G Y +      A K+  E   F E     +VK      
Sbjct: 173 LEKQQQE----NASEMALADLEGFYRE------AKKHYDEDEAFAERARSYVVKLQGGDQ 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y +Q   K++   +    I +D         R + +  RD +   +    +  GI+   K
Sbjct: 223 YFLQMWRKLVDITMSQNQITYD---------RLNVTLTRDDVMGESLYNPMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D 
Sbjct: 274 AKGLA-VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          + +      + L +DG P K   RAG  + L
Sbjct: 333 VLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKL 390

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 391 ADLLDEALERARRLVAEKNPDMSADELENLAKVVGIGAVKYADLSKNRTTDYVFDWDNML 450

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  S+FR+A     D +  +    VI      +  E QL   L 
Sbjct: 451 -AFEGNTAPYMQYAYTRVLSVFRKAG---IDENAMIDAPVVIA-----EDREAQLAARLL 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +        P+ +  YLYDLA +F G + H         + A + +    RL+L 
Sbjct: 502 QFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESEETRNSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+E+   M
Sbjct: 556 LLTAKTLKLGLDTLGIETVERM 577


>gi|206576111|ref|YP_002237735.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288934593|ref|YP_003438652.1| arginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238065091|sp|B5XPZ2|SYR_KLEP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|206565169|gb|ACI06945.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288889302|gb|ADC57620.1| arginyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 577

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 137/622 (22%), Positives = 243/622 (39%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +++ + ++   + V IAG GFIN++L P++L   ++  + S  E       + 
Sbjct: 55  PRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAFLADNVNRALQS--ERLGVTKPQA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDQ 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y +Q   K++   +    I +D         R + +  RD +   +    +  GI+   K
Sbjct: 223 YFLQMWRKLVDITMSQNQITYD---------RLNVTLTRDDVMGESLYNPMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D 
Sbjct: 274 AKGLA-VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          + +      + L +DG P K   RAG  + L
Sbjct: 333 VLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKL 390

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 391 ADLLDEALERARRLVAEKNPDMSADELENLAKVVGIGAVKYADLSKNRTTDYVFDWDNML 450

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  S+FR+A         D    N  P     D  E QL   L 
Sbjct: 451 -AFEGNTAPYMQYAYTRVLSVFRKAG-------IDENAMNDAPVVIAED-REAQLAARLL 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +        P+ +  YLYDLA +F G + H         + A + +    RL+L 
Sbjct: 502 QFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESEETRNSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+E+   M
Sbjct: 556 LLTAKTLKLGLDTLGIETVERM 577


>gi|261340259|ref|ZP_05968117.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317347|gb|EFC56285.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 577

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 129/617 (20%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +        IAG GFIN++L P++L   + + + S          + 
Sbjct: 55  PRQLAEQVLTHLDLTGIASKTEIAGPGFINIFLEPAFLASHVDAALKSDRLGVSQP--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD       F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTNEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDQ 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +       ++R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFLEMWRKLVDITMSQNQL----TYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAKNLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     ++D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----NIDESALANATVT---ITEDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + H         + A +  +   RL+L    A 
Sbjct: 507 LAVVARDGTPHVMCSYLYDLAGLFSGFYEHC------PILSAESDSVRSSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|152970935|ref|YP_001336044.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895450|ref|YP_002920185.1| arginyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|166232797|sp|A6TB43|SYR_KLEP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150955784|gb|ABR77814.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547767|dbj|BAH64118.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 577

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 136/622 (21%), Positives = 246/622 (39%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQALIAAGAPADCEPQ------VRQSAKVQFGDYQANGVMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +++ + ++   + V IAG GFIN++L P++L   ++  + S  E       + 
Sbjct: 55  PRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAFLADNVNRALQS--ERLGVTKPQA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
           +  + Q+          EG+Y            A K+  E   F E     +VK     +
Sbjct: 173 LEKQQQENAGEMALADLEGFYRE----------AKKHYDEDEAFAERARSYVVKLQGGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y +Q   K++   +    I +D         R + +  RD +   +    +  GI+   K
Sbjct: 223 YFLQMWRKLVDITMSQNQITYD---------RLNVTLTRDDVMGESLYNPMLPGIVADLK 273

Query: 296 SKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +K     + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D 
Sbjct: 274 AKGLA-VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADR 332

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          + +      + L +DG P K   RAG  + L
Sbjct: 333 VLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKL 390

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 391 ADLLDEALERARRLVAEKNPDMSADELENLAKVVGIGAVKYADLSKNRTTDYVFDWDNML 450

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  S+FR+A     D +  +    VI      +  E QL   L 
Sbjct: 451 -AFEGNTAPYMQYAYTRVLSVFRKAG---IDENAMIDAPVVIA-----EDREAQLAARLL 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +        P+ +  YLYDLA +F G + H         + A + +    RL+L 
Sbjct: 502 QFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESEETRNSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+E+   M
Sbjct: 556 LLTAKTLKLGLDTLGIETVERM 577


>gi|157371031|ref|YP_001479020.1| arginyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987305|sp|A8GFK2|SYR_SERP5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157322795|gb|ABV41892.1| arginyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 576

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 238/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQVLLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMSVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      V IAG GFIN++L+  ++ +    ++ +          K 
Sbjct: 55  PRQLAEKVVQLLDLGDVASKVEIAGPGFINIFLNSQWVAQQADRVLSAPKLD--IAPVKQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A    F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +   +      E +Y            A K+  E  +F E     +VK      
Sbjct: 173 LEKMQNENASDMGLSDLEQFYRE----------AKKHYDEDADFAERARAYVVKLQGGDQ 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +       ++R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCLKMWRKLVDITMAQNQL----TYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVDRAGKLIAEKNPDMPAEEMQSLANAVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F++A      +D       ++  E      E+ L   L ++  V
Sbjct: 455 NTAPYMQYAYTRVASVFKRAG-----VDESNLTLPLVMTE----EREITLATRLLQFEEV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H +       + A++ +    RL+L    A 
Sbjct: 506 ITTVAREGTPHVMCSYLYDLAGLFSGFYEHCQ------ILNADSEEARQSRLKLSLLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKVGLDTLGIETVERM 576


>gi|315930154|gb|EFV09278.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 548

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 164/560 (29%), Positives = 288/560 (51%), Gaps = 43/560 (7%)

Query: 26  KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           KKIL+    +E P+D    H +T  A  L++ L   P+ IA  + ++ +     + V  A
Sbjct: 10  KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFELVE-A 68

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
             G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R A
Sbjct: 69  VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + PE YY G 
Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+  + KE  +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  
Sbjct: 188 YIADLAKEAFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++      +   +++L     +YE                   ++   S+  GD+ DR +
Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           ++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++
Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +++
Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +   NPV+Y+ YA+AR   +F +A     D+                +   + L+     
Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALN 456

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L  
Sbjct: 457 LKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFS 507

Query: 565 AVASIINSGLNIIGVESPNE 584
            VA  I +  +++G+E+ N+
Sbjct: 508 LVALSIKTAFSLMGIEAKNK 527


>gi|220909041|ref|YP_002484352.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782957|sp|B8HSK8|SYR_CYAP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219865652|gb|ACL45991.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 585

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 137/612 (22%), Positives = 234/612 (38%), Gaps = 69/612 (11%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            LK  L+        E       ++        G   +NA + L++ L   P TIA  IV
Sbjct: 7   HLKTQLQRAMVAAYGETLSGADPLLVNASHPKFGDYQSNAPLPLAKQLNQPPRTIASTIV 66

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             +++    +   IAG GFIN  L  SYL   L   +      G + +    +V ++F S
Sbjct: 67  DHLEVGEAWEPPTIAGPGFINFTLKTSYLASQLELRLTD-PRLGISAVKLPLRVVVDFSS 125

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N    MHVGH R  ++GD LA ++ F G+EV R  ++ D G Q   L   +     +AL
Sbjct: 126 PNIAKEMHVGHLRSTIIGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEAL 185

Query: 190 YNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
              D+    DL   Y           +       E++     +   +   ++ Q +    
Sbjct: 186 TAPDAVDLGDLVAFYRQAKQRFDSDPDFQAIARQEVVRLQSGEPDSL---HAWQLLCAQS 242

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R + + +    DI ++E      +P  +  +I  L + G + E        +  +   ++
Sbjct: 243 RREFEKIYNLLDIKLTERGESFYNP-LLPQVIQALDQTGLLVE-------DQGAKCVFLE 294

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364
                  +   GD     + KSDG Y Y   DLA  + + E+   D +IYV  +  S + 
Sbjct: 295 GY-----TNKAGDPQPLIVQKSDGGYIYATTDLAALRYRIEQDQADWIIYVTDAGQSTHF 349

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
            ++  VA        +I ++      L +     K+  R+GD + L+ ++DE        
Sbjct: 350 AQVFQVAQRAGWIPNRIRLVHVPFG-LVQGEDGKKLKTRSGDTVRLQDLLDEAIDRARND 408

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    F + K+    + N   Y
Sbjct: 409 LVSRLEAEGRQETPEFIDHVAQVVGIGAVKYADLSQNRTSNYVFSYDKMLSL-QGNTAPY 467

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R + I R+ +        DL      P  S  +  E  L  HL +   V+   T
Sbjct: 468 LIYAYVRVQGISRKGQ-------IDLEQLTEQPTLSLQEEEEKLLARHLLQLEDVLAQVT 520

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P +L  YL++L+  F+  +           +QA    L   RL L    A  +  G
Sbjct: 521 EDLLPNRLCQYLFELSQKFNQFYDRC------PILQAEEP-LRNSRLGLAQLTARTLKLG 573

Query: 574 LNIIGVESPNEM 585
           L+++G++    M
Sbjct: 574 LSLLGIQVLERM 585


>gi|332161947|ref|YP_004298524.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325666177|gb|ADZ42821.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 576

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 125/618 (20%), Positives = 236/618 (38%), Gaps = 75/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L                  + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAG------SEPQVRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +D     V IAG GFIN++L   ++   +   + +     + +  + 
Sbjct: 55  PRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAPKLGVQPV--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSV 238
           +   + + A     SDL   Y          +E A +  + ++     +++   +    V
Sbjct: 173 LEKMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQSGDEYCRQMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   P    +I+ +L  +G   E       S
Sbjct: 233 DITMAQNQISYDRLNVTLTKDDVMGESLYNTMLP----EIVADLKAKGLAVE-------S 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
           +      +D  +        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y 
Sbjct: 282 EGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S    ++ +   +          + +      + L +DG P K   R+G  + L  ++
Sbjct: 337 IDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +     
Sbjct: 395 DEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD- 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  S+F++A          +   N+I      +  E  L   L ++  
Sbjct: 454 GNTAPYMQYAYTRVVSVFKRAG---------VDESNLILPLVITEDREAALATRLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           VI        P+ +  YLYDLA +F   + H +       + A++ +    RL+L    A
Sbjct: 505 VITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNADSEESRQSRLKLAMLTA 558

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+ +G+++   M
Sbjct: 559 KTLKQGLDTLGIQTVERM 576


>gi|238799211|ref|ZP_04642660.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238716940|gb|EEQ08807.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 608

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 117/612 (19%), Positives = 231/612 (37%), Gaps = 69/612 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  + L + + +                + +      G    N  M +++ LG+ P  +A
Sbjct: 34  NIQALLSDKVSQALIAAGAPAG--SEAQVRQSAKAQFGDYQANGVMAVAKKLGMQPRQLA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E ++  + ++     V IAG GFIN++L   ++   +   + +          +   + +
Sbjct: 92  EKVIELLDLEGIASKVEIAGPGFINIFLDRQWVASKVEHALTAPKLGV--APVEPQTIVV 149

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   +    
Sbjct: 150 DYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQ 209

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            ++  + D    E +Y          + A K   E   F       +VK  S     + +
Sbjct: 210 NESASDMDLSDLELFY----------QQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQM 259

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              L  + +  +       + R + +  +D +   +    +  GI+   K+K     + D
Sbjct: 260 WRKLVDITMAQNQIA----YDRLNVTLTKDDVMGESLYNAMLPGIVADLKAKGLA-VESD 314

Query: 306 RKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +++        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y + +   
Sbjct: 315 GATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQH 374

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            ++ +   +          + +      + L +DG P K   R+G  + L  ++DE    
Sbjct: 375 QHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLLDEAIER 432

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    FD+  +      N   Y
Sbjct: 433 AGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD-GNTAPY 491

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  S+F++A      +D       ++  E      E  L   L ++  VI    
Sbjct: 492 MQYAYTRVVSVFKRAG-----VDESSLTLPLVITE----DREAALATRLLQFEEVITTVA 542

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YLYD+A +F   + H +       + A + ++   RL+L    A  +  G
Sbjct: 543 REGTPHVMCSYLYDVAGLFSSFYEHCQ------ILNAESEEIRQSRLKLAMLTAKTLKQG 596

Query: 574 LNIIGVESPNEM 585
           L+ +G+ +   M
Sbjct: 597 LDTLGIRTVERM 608


>gi|227355376|ref|ZP_03839777.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227164600|gb|EEI49471.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 576

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 237/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +                 ++ +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAFLSEKISMAMSAAGAPAD------SEPLVRQSAKVQFGDYQANGVMGAAKKMGIP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I+  + I    D V IAG GFIN++LSP ++ +     +    E+        
Sbjct: 55  PRQLAEKILEHLDITDIADKVEIAGPGFINIFLSPVWVAQQAEFALAD--EHLNITKVTP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD  A  ++F G+ V R  ++ D G Q   L   
Sbjct: 113 ETIVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVIRANHLGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  +   +      E +Y            A K   E   F E     +V+      
Sbjct: 173 LEKKQNENAADMALADLEEFYRE----------AKKCYDEDEVFAERARNYVVRLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +       + R + +   D I   +    +  GI+   K+K   
Sbjct: 223 YCRTMWRKLVDITMQQNQL----TYQRLNVTLTEDDIMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K ++E+   + ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRHEQLHANRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPDSMSLEHHMFGMMLGKDGRPFK--TRSGGTVRLTDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAHERALTLIREKNPDMDEEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A     ++D     + +    S     E QL + L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRA-----EIDESALTQPI----SLTQPHEKQLALRLVQFDET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA  F G + +         + A +  +   RL+L    A 
Sbjct: 506 ITQVAREGTPHVMCAYLYDLAQSFSGFYENC------PILSAEDDNVRQSRLKLARLTAR 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL  +G+E+ + M
Sbjct: 560 TLKQGLETLGIETVDRM 576


>gi|300717101|ref|YP_003741904.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062937|emb|CAX60057.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 576

 Score =  435 bits (1119), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 228/617 (36%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGIMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFINL+L   +L   + ++  +            
Sbjct: 55  PRQLAEEVLKHLDLTGIASKVEIAGPGFINLFLDKQWLSAQVDAVTAAPRLG--VAPVAP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLI-- 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F   QQ  ++ +  L +          V    A +   E   F E     +VK      
Sbjct: 171 AFLEKQQNEHHEEHALAD--------LEVFYREAKRTYDEDPAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  R  +   +    +  GI+    +K   
Sbjct: 223 YCRTMWKKLVDITMAQNQII----YDRMNVTLSRKDVMGESLYNDMLPGIVADLTAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
               +   ++F        GD +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VQSEGATVVFLDEYKNKDGDPMGVIIKKKDGGYLYTTTDIACAKYRYETLKADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                 ++ +   +          + +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DCRQHQHLMQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGKPFK--TRAGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  ++++  L +  +    FD+  +    + 
Sbjct: 396 EAVERATKLVGEKNPDMPADELKALANSVGIGAIKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A          +    V       +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAG---------IDETGVTGNAQIVEDREAALAVRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A++      RL+L    A 
Sbjct: 506 ITQVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILTADDEATKQSRLKLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++   M
Sbjct: 560 TLKQGLDTLGIDTVERM 576


>gi|283954731|ref|ZP_06372248.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793784|gb|EFC32536.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 530

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 161/563 (28%), Positives = 288/563 (51%), Gaps = 42/563 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           +++K +     +E P+D    H +T  A  L++ L   P+ IA  +  + +     + V 
Sbjct: 8   EIKKVLECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIANDLANKFQNHDCFEVVE 67

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            A  G++N  +S ++L ++ +  +++  ++ +    K     +E+VSANPTGP+H+GH R
Sbjct: 68  -AVNGYLNFRISKTFLNELANKALINPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHAR 125

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            AV GDTL  L    GY+   EYY+NDAG QI  L LS+    ++ + + + + P+ YY 
Sbjct: 126 SAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILSENVEYPDQYYK 185

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y+  + KE  +K+  E  +   E  +P + D++   M+ +I+ +L+ + I+ D + SE
Sbjct: 186 GEYIADLAKEAFEKFGKEFFS---ENNIPSLADWAKDKMLVLIKQNLEQVKIKIDTYASE 242

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++      +   + +L     +YE                   ++   S+  GD+ DR
Sbjct: 243 RSYY----DTLNATLKSLKEHKGIYE----------------QEGKIWLASSQKGDEKDR 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            +++ DG  TY AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + 
Sbjct: 283 VIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMGFLGFNPDNLE 342

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           ++L ++V L +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   +
Sbjct: 343 IILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDL 402

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +++   NPV+Y+ YA+AR   IF +A     D+        +       +   + L+   
Sbjct: 403 QKEDSSNPVYYINYAHARIHQIFVKAGKKIDDV--------IGADLQSLNQDGVNLLFEA 454

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                ++ +A  A+   K+  YL +LA+ FH  ++  +         AN   L    L+L
Sbjct: 455 LNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANEDDL----LKL 505

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              VA  + +  +++G+E+ N+M
Sbjct: 506 FSLVALSVKTAFSLMGIEAKNKM 528


>gi|157145345|ref|YP_001452664.1| arginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166232776|sp|A8AFG5|SYR_CITK8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157082550|gb|ABV12228.1| hypothetical protein CKO_01085 [Citrobacter koseri ATCC BAA-895]
          Length = 577

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 129/617 (20%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVSQAMIVAGAPANCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S            
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASERLGVAKPA--K 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+          EG+Y            A K+  E   F E     +VK      
Sbjct: 173 LEKQQQENAGEMALADLEGFYRD----------AKKHYDEDEAFAERARNYVVKLQGGDP 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +       ++R + +  RD +   +    +  GI+   K++   
Sbjct: 223 YFLDMWRKLVDITMTQNQI----TYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     ++D        +      +  E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKA-----EIDESALSSAPV---VIREDREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N ++   RL+L    A 
Sbjct: 507 LTVVAREGTPHVMCAYLYDIAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 561 TLKLGLDTLGIETVERM 577


>gi|261343877|ref|ZP_05971522.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568263|gb|EFB73798.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 576

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 234/617 (37%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         +       ++ +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAILSDKVSAAMLAAGAPEGCDA------LVRQSAKAQFGDYQANGVMGAAKKMGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV+ + ++     V IAG GFIN+++ P+++       + S          K 
Sbjct: 55  PRQLAEQIVSHLDLEGIATKVEIAGPGFINIFIDPTWVATYAEQALTSDRLG--IAPVKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A    F G++V R  ++ D G Q   L   
Sbjct: 113 ETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N D+          + +      A K+  E  +F       +VK  S   
Sbjct: 172 ----YLEKVQNEDASDMALADLEAFYRE-----AKKHYDEDEDFAVRARGYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +     + +HR + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCRKMWRKLVDITMQQNQ----ETYHRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D  +Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLHADRSLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPESMALEHHMFGMMLGKDGKPFK--TRSGGTVRLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAQTLIREKNPDMPEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A     DL   +               E+ L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKKANITEADLTLPIVLEA---------PHEIVLATRLMQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   + H         + A+N      RL+L      
Sbjct: 506 ILTVARDGTPHVMCAYLYDLAGLFSSFYEHC------PILSADNDAQRQSRLKLALLTQK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKVGLDTLGIETVERM 576


>gi|153950466|ref|YP_001401016.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|166987306|sp|A7FID8|SYR_YERP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152961961|gb|ABS49422.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 576

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/628 (20%), Positives = 240/628 (38%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F       +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    + +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +  A+          + +      + L +DG P K   R+
Sbjct: 327 TLGADRILYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+FR+A      +D +     ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDENSLTLPLVITE----DREAA 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYDLA +F   + H +       + A + ++  
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEEIRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|37526009|ref|NP_929353.1| arginyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932033|sp|Q7N565|SYR_PHOLL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|36785439|emb|CAE14385.1| Arginyl-tRNA synthetase (Arginine-tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 576

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 134/618 (21%), Positives = 235/618 (38%), Gaps = 75/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E        I +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAILSEKVSQALIAAGAPADSEA------HIRQSAKAQFGDYQANGVMAAAKKVGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      V IAG GFIN++L  +++   + + +    E       K 
Sbjct: 55  PRQLAEKVVNLLNLQGIASKVEIAGPGFINIFLDKAWIAANIETALKD--EKLGVTPAKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSV 238
           +   + + A     SDL   Y          +E A +    ++     +++   +    V
Sbjct: 173 LEKVQNENASDMALSDLEAFYREAKKHYDEDEEFAIRARGYVVKLQGGDEYCRTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+ +L +QG   E       S
Sbjct: 233 DITMAQNQQTYDRLNVTLTKDSVMGESLYNDLLPS----IVADLKQQGLAVE-------S 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D  +        G+ +   + K DG Y Y   D+A  K +YE    D ++Y 
Sbjct: 282 DGATVVYLDEYK-----NKEGEPMGVIIQKQDGGYLYTTTDIACAKYRYETLHADRILYY 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S    ++ +   +          +++      + L +D  P K   RAG  + L  ++
Sbjct: 337 IDSRQHQHLMQAWTIVRKAGYVPESVSLEHHMFGMMLGKDSKPFK--TRAGGTVRLTDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERANTLIREKNPDMPEDELKKVVSAVGIGAVKYADLSKSRTTDYIFDWDNML-AFE 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  SIF++A     ++D       VI  E      E  L   L ++  
Sbjct: 454 GNTAPYMQYAYTRVASIFKRA-----EIDESSLTLPVILNE----DREQTLATRLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I        P+ +  YLYDLA +F   + H +       + A + +L   RL+L    A
Sbjct: 505 TITTVAREGTPHVMCAYLYDLAGLFSCFYEHCQ------ILNAESEELRQSRLKLALLTA 558

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GLN +G+E+   M
Sbjct: 559 KTLKQGLNTLGIETVERM 576


>gi|315638909|ref|ZP_07894081.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481127|gb|EFU71759.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 530

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 165/555 (29%), Positives = 270/555 (48%), Gaps = 42/555 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
             ++E P+D A  H +T  A  L++     P  IA  +  + +     + V  A  G++N
Sbjct: 16  DFILENPKDKALAHFATPLAFSLAKEFKKAPALIAADLALKFEDHFYFEKVE-AVNGYLN 74

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             LS ++L  +    +    E+G+    K     +E+VSANPTGP+H+GH R A+ GDTL
Sbjct: 75  FRLSKAFLDTLAKKALKQPDEFGKGKA-KNESFLLEYVSANPTGPLHIGHARGAIFGDTL 133

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A +    GY+   EYY+NDAG QI+ L LSV  + +    N + + PE  Y G Y+  + 
Sbjct: 134 ARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILCLNEELEYPENAYKGEYIDDLA 193

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +E    +  +         L      +   M+ +I+ +L   NI  D ++SE  ++    
Sbjct: 194 REAFANFEKDFFTMDNVSNLAFW---AKDKMLDLIKQNLAQANIIIDHYVSERSYYN--- 247

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + D I +L   G VYE                   ++   S++ GD+ DR +++ DG 
Sbjct: 248 -ALEDTIRSLKAHGGVYE----------------KDYKIWLASSLKGDEKDRVIVRDDGR 290

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY AAD+ Y K K  RG+D  I + G+DH GY+ R++A    +      + ++L ++V 
Sbjct: 291 GTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIPRMKAAIEFLGFNPQNLEIILAQMVS 350

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +D  P KMSKRAG+FI +  ++DE+GSD++RF+ L +K    L+FD   +K++   NP
Sbjct: 351 LLKDNQPYKMSKRAGNFILMSEILDEIGSDALRFIFLSKKCDTHLEFDIDILKKEDSSNP 410

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +FY+ YA+AR + IF +A     D+        V    S  +     L+        V+ 
Sbjct: 411 IFYINYAHARVKQIFLKAGKSLDDV--------VEADLSNLNDEATNLLFEALNLGSVLN 462

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   +   K+  YL  LA+ FH  +   R       +   N       L+L   VA  I
Sbjct: 463 DAFEQRALQKIPDYLKGLAASFHKFYYENR------VIGTENED---SLLKLFALVALSI 513

Query: 571 NSGLNIIGVESPNEM 585
            +G  ++G+ + ++M
Sbjct: 514 KTGFALMGIRAKDKM 528


>gi|313681372|ref|YP_004059110.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154232|gb|ADR32910.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 526

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 171/562 (30%), Positives = 293/562 (52%), Gaps = 44/562 (7%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           +  K    +++E+P+D + GH +T  A  L++ L   P+ IAE I      +    +V  
Sbjct: 9   LRDKFNADVILEKPKDRSFGHFATPIAFSLAKELRKSPMLIAEEIAGSFADESMFSAVE- 67

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           + +G+IN  LS ++L +  S  +  G E+G +   K   + +EFVSANPTGP+H+GH R 
Sbjct: 68  SVQGYINFRLSEAFLDEYASWALSHGDEFGSSD--KKGTILLEFVSANPTGPLHIGHARG 125

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV GDT+  L    GY++T EYY+NDAG QI+ L +S+    + +L     + PE YY G
Sbjct: 126 AVYGDTMLRLGRHLGYDITAEYYVNDAGNQIDLLGVSLQLEGRSSLLGESVEWPEKYYRG 185

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            YL  + +E+ + +  E L   +E     +  ++   ++ +I DDL A+N+  D F+ E 
Sbjct: 186 EYLSDLAREVVELFGEEALR--DESRQKELALWAKDKILALIVDDLAAINVHFDTFVGEA 243

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +    S    ++  +    YV EG                  +   RS+ +GDD DR 
Sbjct: 244 SLY----SEWDRVMAKMGEGVYVNEG------------------KTFIRSSDLGDDHDRV 281

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +++ DG  TY A D+ Y   K+ERG+D+ I + G+DH GY+ R++A    +    +++ V
Sbjct: 282 VVREDGRPTYLAGDIIYHNQKFERGYDDYINIWGADHHGYIARVKAAITFLGYDSSKLEV 341

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL ++V L +DG P KMSKRAG  I +  VV+E+G++++RFM   +K    L+FD  ++K
Sbjct: 342 LLSQMVSLLKDGEPFKMSKRAGTVILMSDVVEEIGAEALRFMFASKKCDTALEFDIEELK 401

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            Q   NP++Y+QYA+AR +++  +++    ++            +         L+    
Sbjct: 402 RQDSSNPIYYIQYAHARIQTLISKSEKNMDEIMGSHLYGLSSDADG--------LLFEAL 453

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P +I++A  +++  KL  YL  LA   H  +   R       +   +    +   +L+
Sbjct: 454 LLPEIIDDAFESRQAQKLPDYLKVLAGRLHKFYYDTR------IIGTEDEAKLL---KLL 504

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  I +GL+++G+++ + M
Sbjct: 505 LVVALSIKTGLSLLGIQAKDRM 526


>gi|238756954|ref|ZP_04618142.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704784|gb|EEP97313.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 576

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 121/617 (19%), Positives = 239/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L       + E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAECEAQ------VRQSAKVQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++ ++ +      V IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAEKVIEQLDLTGIASKVEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 LTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N ++        G+    +  + A K   E   F +     +VK      
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       ++R + +  +D +   +    +  GI+   K+K   
Sbjct: 223 YCRAMWRKLVDITMAQNQIA----YNRLNVTLTQDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   +++        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESEGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +      
Sbjct: 396 EAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD-G 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F++A      +D       ++  E      E  L   L ++  V
Sbjct: 455 NTAPYMQYAYTRVISVFKRAG-----IDESSLTLPLVITE----EREASLATRLLQFEEV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   + H +       + A++ +    RL+L    A 
Sbjct: 506 ITAVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNADSEESRQSRLKLAMLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++   M
Sbjct: 560 TLKQGLDTLGIQTVERM 576


>gi|170024389|ref|YP_001720894.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688454|sp|B1JLM2|SYR_YERPY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169750923|gb|ACA68441.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 576

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/628 (20%), Positives = 238/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--TPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F       +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    + +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+FR+A      +D       ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDESSLTLPLVITE----DREAA 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYDLA +F   + H +       + A + ++  
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEEIRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|110004341|emb|CAK98679.1| probable arginyl-trna synthetase protein [Spiroplasma citri]
          Length = 557

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 173/584 (29%), Positives = 290/584 (49%), Gaps = 43/584 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
             ++ +  +      +   +++E+PR    GHLSTN A++L++ L   P  IAE I+A I
Sbjct: 6   KLIENLLQEYLKANNLTIPVMVEKPRQEGFGHLSTNLALLLAKKLKKTPNKIAEEIIAFI 65

Query: 73  KID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           + +       + IAG GFIN  L+   L ++++ ++     YG +   K    N+E VSA
Sbjct: 66  EKNNKSYFKKIEIAGAGFINFTLADDQLHQVINEVLKRQANYGYSAA-KNFTYNLEIVSA 124

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NPTG +H+GH R   +GD++A ++  +GY V  EYY+NDAG QINTLA++VF  Y   L 
Sbjct: 125 NPTGFLHIGHARNCAIGDSVARILRAAGYHVQTEYYVNDAGNQINTLAVTVFVSYLNLL- 183

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--------EEKWLPIVKDYSVQAMM 242
              ++LP   Y G     V +   D Y  + +N          + K   I +  SV   +
Sbjct: 184 GKKTELPADAYRGDMYDAVAQYFVDNYQDKFINLTFNEDYKISDPKVHEIFRKKSVDLFL 243

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            II+  L+   +  + + SE   + G    I   +   A+ G  Y+              
Sbjct: 244 DIIKKQLQLFRVDIEYYSSEASMYEG--GKIDATLAQYAKLGKTYQ-------------- 287

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
                 L  ++T  GDD DR L+KS+G  TY   DLA    +  R   D ++   G DH 
Sbjct: 288 --QDGALWLKTTDFGDDKDRVLVKSNGDLTYITPDLASHNERLIRSKADKLVNFWGGDHH 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           GY+ R+ A    +  KK  +++ + ++VRL +DG   KMSKR G  + L  +++E+G D+
Sbjct: 346 GYIVRMLAGLQLLGYKKDILDIDMIQMVRLIKDGAEYKMSKRKGTAVWLIDLIEEIGVDA 405

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +R+M+  +     +D D   +K+ S +NPV+Y QYA ARC S+ +QAK    +       
Sbjct: 406 IRYMVSSKSAQSHMDLDIGILKQHSSKNPVYYAQYATARCNSVLKQAKISKINF------ 459

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            +V   E      EL L+  +  + R I+ A   ++P+ +  Y+ ++A  FH +++    
Sbjct: 460 TDVKTFELLTSQKELYLLNEIDLFNRCIKGAAKLRQPHLICDYVQNIARQFHSYYNES-- 517

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + +  +N +LT  RL  +  +  ++++  N++GV    +M
Sbjct: 518 ----KVINLDNLELTKQRLVFIKVIYQVLSNAFNLLGVNVIEQM 557


>gi|254415644|ref|ZP_05029403.1| arginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196177594|gb|EDX72599.1| arginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 585

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 245/614 (39%), Gaps = 71/614 (11%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            +LK   ++       E       ++    +   G   +NAA+ L++PLG  P  IA+++
Sbjct: 6   EQLKAKCEQALIAAFGETMAGTDPMLVPASNPKFGDYQSNAALSLAKPLGQPPRAIAQML 65

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           +  + +     +  +AG GFIN  L P+YL   L+  +      G     +  +V ++F 
Sbjct: 66  INHLDVADICYTPTVAGPGFINFTLKPAYLEAKLNRNLTH-PHLGVEPAKQPQRVVVDFS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R  ++GD +A ++ F  ++V R  ++ D G Q   L   +     +A
Sbjct: 125 SPNIAKEMHVGHLRSTIIGDCIARILEFRDHDVLRLNHVGDWGTQFGMLITYLREVCPEA 184

Query: 189 LYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L   ++    DL   Y          +   +    E++              + Q + + 
Sbjct: 185 LTTAEAVDLGDLVSFYRQAKKRFDTDEVFQEAARQEVVKLQAGAEDTK---RAWQLLCEQ 241

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R + + +    D+ I+E      +P  + D++ +L + G + E        +  +   +
Sbjct: 242 SRREFQVIYDLLDVHITERGESFYNP-LLPDVVKDLEQSGLLVE-------DQGAKCVFL 293

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
           +       +   G+ +   + KSDG Y Y   DLA  + + ++ G   +IYV  +  + +
Sbjct: 294 EG-----FTNKKGEPLPLIVQKSDGGYNYATTDLAALRYRIDQNGAKRIIYVTDAGQANH 348

Query: 364 VKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
             ++  VA         + ++     + L  DG   K+  R+G+ + LR ++D+      
Sbjct: 349 FAQVFQVAQRAGWLPEIVEIVHVPFGLVLGEDGK--KLKTRSGETVRLRDLLDQAIARAR 406

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  +V++  L +  +    F F K+    K N  
Sbjct: 407 ADLETRIQAEGRQETEEFIEHVAQVVGMAAVKYADLSQNRTSNYVFSFDKMLSL-KGNTA 465

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YAYAR +SI R+       +DF+    +   Q S  +  E  L  HL +   VI+ 
Sbjct: 466 PYLLYAYARIQSIGRKGG-----IDFEQLRTS--TQVSLKEDQEATLAKHLLQVNEVIKE 518

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P +L  YLY+L+  F   +      P L+        + + RL L    A  + 
Sbjct: 519 VEQELLPNRLCQYLYELSEKFSQFYDQC---PVLK----AEESVRLSRLILCDLTAQTLK 571

Query: 572 SGLNIIGVESPNEM 585
            GL+++G+     M
Sbjct: 572 LGLSLLGISVLERM 585


>gi|242239601|ref|YP_002987782.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131658|gb|ACS85960.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 576

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 244/617 (39%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E       ++ +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMVAAGAGADCEA------MVRQSAKAQFGDYQANGIMAVAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  +++D       IAG GFIN++L   +L   L    +S  + G   + + 
Sbjct: 55  PRQLAEQVVQLLQLDGIAAKTEIAGPGFINIFLDRQWLSAQL-EHALSAPKLGIAGV-EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD     +AF G++V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLAFLGHKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +   + +    E +Y            A K+  +   F E     +VK      
Sbjct: 173 LEKVQNEHAGDLELSDLEAFYRE----------AKKHYDDDAAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++ ++ R + +  +D +   +    +  GI+   K+K   
Sbjct: 223 YCRTLWRRL----VDITMSQNQRNYDRLNVTLTKDDVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   +++        G+ +   + K DG Y Y   D+A  K +YE    + ++Y +
Sbjct: 279 -VESEGATVVYLEEFRNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNANRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYVPDAVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 396 EAYDRALALIAEKNPQMARAELEQLAQVVSVGAVKYADLSKNRTTDYVFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      +D     + +I      D  EL L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAG-----VDDGSLTQPII----LDDERELALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   + H         + A++  +   RL+L    A 
Sbjct: 506 ITTVAREGTPHVMCAYLYDLAGLFSSFYEHC------PILNADSDSVRQSRLKLAQLTAM 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++  +M
Sbjct: 560 TLKTGLDTLGIQTVEKM 576


>gi|17231209|ref|NP_487757.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|23822197|sp|Q8YQU9|SYR_ANASP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17132851|dbj|BAB75416.1| arginyl-tRNA-synthetase [Nostoc sp. PCC 7120]
          Length = 588

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 134/623 (21%), Positives = 242/623 (38%), Gaps = 73/623 (11%)

Query: 1   MYLF-ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +L+  L         E   +D I++    +   G    N A+ LS+ LG 
Sbjct: 1   MNATQEQLKIKLEQAL---VAAFGDEYAGVDPILVSAS-NPKFGDYQANVALSLSKKLGQ 56

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA  IV ++ +    +   IAG GFINL L  +YL   L++I       G      
Sbjct: 57  QPRAIASAIVEKLDVSEICEKPEIAGPGFINLKLKTAYLEAQLNTIQAD-TRLGVPTAKH 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    MHVGH R  ++GD++A ++ F G++V R  ++ D G Q   L  
Sbjct: 116 PQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLIT 175

Query: 180 SVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +     +AL      +  DL   Y          +   +    E++         +   
Sbjct: 176 YLREVSPEALTTANALDIGDLVSFYRQAKQRFDADEAFQETARQEVVRLQAGAADTL--- 232

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++ + + +  R + + +    D+ ++E      +P  +  +++NL + G + E       
Sbjct: 233 HAWKLLCEQSRQEFQVIYDLLDVKLTERGESFYNP-LLPTVVENLEKSGLLVEN------ 285

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIY 354
            +  +   +D       +   G+ +   + KSDG Y Y   DLA  + + ++     +IY
Sbjct: 286 -QGAKCVFLDG-----FTNREGEPLPLIVQKSDGGYNYATTDLAALRYRIQKDEAKRIIY 339

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +  +  + +  +   VA         +  V +   + L  DG   K   R+GD + LR +
Sbjct: 340 ITDAGQANHFAQFFQVARKAGWIPDDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDL 397

Query: 414 VDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           +DE                               VG  +V++  L +  +    F + K+
Sbjct: 398 LDEAISRAHADVEVRLKAEEREETAEFIDKVAEVVGISAVKYADLSQNRTSNYIFSYDKM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +  K N   Y+ YAYAR + I R+ +  F DL  +        +      +E  L  +L
Sbjct: 458 LDL-KGNTAPYMLYAYARIQGISRKGEINFADLGDNA-------KVILQHETEFALAKYL 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +   VI        P +L  YLY+L+  F+  +   +       V +    L   RL L
Sbjct: 510 LQLGEVISTVEEDLSPNRLCEYLYELSKRFNAFYDRNQGV----QVLSAEEPLRTSRLVL 565

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL+++G++    M
Sbjct: 566 CDLTARTLKLGLSLLGIQVLERM 588


>gi|331016037|gb|EGH96093.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 578

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/610 (20%), Positives = 238/610 (39%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + + L   L + +    +      G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQNTAALASRLDAALAD-PQLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H        + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----QTYERLNVKLTPADVMGESAYNDDLANVVNDLKAAGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D  +Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAQERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPQVAEAELRSIARAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD    +++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGHIVLEA----PQEQELAARLAQFNETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|213969436|ref|ZP_03397573.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301382647|ref|ZP_07231065.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302060631|ref|ZP_07252172.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132698|ref|ZP_07258688.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213925807|gb|EEB59365.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 578

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/610 (20%), Positives = 238/610 (39%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + + L   L + +    +      G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQNTAALASRLDAALAD-PQLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H        + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----QTYERLNVKLTPADVMGESAYNDDLANVVNDLKAAGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D  +Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAQERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPQVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD    +++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGHIVLEA----PQEQELAARLAQFNETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|318605975|emb|CBY27473.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 576

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 125/618 (20%), Positives = 236/618 (38%), Gaps = 75/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L                  + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAG------SEPQVRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +D     V IAG GFIN++L   ++   +   + +     + +  + 
Sbjct: 55  PRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAPKLGVQPV--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSV 238
           +   + + A     SDL   Y          +E A +  + ++     +++   +    V
Sbjct: 173 LEKMQNENASDMGLSDLELFYQQAKKTYDEDEEFAKRARAYVVKLQSGDEYCRQMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   P    +I+ +L  +G   E       S
Sbjct: 233 DITMAQNQISYDRLNVTLTKDDVMGESLYNTMLP----EIVADLKAKGLAVE-------S 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
           +      +D  +        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y 
Sbjct: 282 EGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYY 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S    ++ +   +          + +      + L +DG P K   R+G  + L  ++
Sbjct: 337 IDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +     
Sbjct: 395 DEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD- 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  S+F++A          +   N+I      +  E  L   L ++  
Sbjct: 454 GNTAPYMQYAYTRVVSVFKRAG---------VDESNLILPLVITEDREAALATRLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           VI        P+ +  YLYDLA +F   + H +       + A++ +    RL+L    A
Sbjct: 505 VITTVAREGIPHVMCSYLYDLAGLFSSFYEHCQ------ILNADSEESRQSRLKLAMLTA 558

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+ +G+++   M
Sbjct: 559 KTLKQGLDTLGIQTVERM 576


>gi|224583587|ref|YP_002637385.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224468114|gb|ACN45944.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 563

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/587 (21%), Positives = 229/587 (39%), Gaps = 66/587 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
              + +      G    N  M +++ LG+ P  +AE ++  + +      V IAG GFIN
Sbjct: 11  EPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFIN 70

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L P++L + +   + S              + +++ + N    MHVGH R  ++GD  
Sbjct: 71  IFLEPAFLAEQVQQALASDRLGVSQPTR--QTIVVDYSAPNVAKEMHVGHLRSTIIGDAA 128

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              + F G+ V R  ++ D G Q   L   +  + Q+   +      EG+Y         
Sbjct: 129 VRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGDMALADLEGFYRD------- 181

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
              A K+  E   F E     +VK  S  A  + +   L  + +  +       + R + 
Sbjct: 182 ---AKKHYDEDEAFAERARNYVVKLQSGDAYFREMWRKLVDITMTQNQI----TYDRLNV 234

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKS 327
           +  RD +   +    +  GI+   K+K     + +   ++F        GD +   + K 
Sbjct: 235 TLTRDDVMGESLYNPMLPGIVADLKAKGLA-VESEGATVVFLDEFKNKEGDPMGVIIQKK 293

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG Y Y   D+A  K +YE    D ++Y + S    ++ +   +          + +   
Sbjct: 294 DGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHH 353

Query: 387 EL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
              + L +DG P K   RAG  + L  ++DE                           VG
Sbjct: 354 MFGMMLGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 411

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D  
Sbjct: 412 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQ 465

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +      +  E QL   L ++   +        P+ +  YLYD+A +F G + H
Sbjct: 466 ALASAPV---IISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 523 C------PILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 563


>gi|28872251|ref|NP_794870.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|38258308|sp|Q87V03|SYR_PSESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28855505|gb|AAO58565.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 578

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/610 (20%), Positives = 238/610 (39%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + + L   L + +    +      G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQNTAALASRLDAALSD-PQLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H        + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----QTYERLNVKLTPADVMGESAYNDDLANVVNDLKAAGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D  +Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAQERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPQVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD    +++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGHIVLEA----PQEQELAARLAQFNETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|330964749|gb|EGH65009.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 578

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/610 (20%), Positives = 237/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + + L   L + +       R       +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQNTAALASRLDAALADPPLSVRKAGTA-QRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H        + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----QTYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D  +Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD    +++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGHIVLEA----PQEQELAARLAQFNETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|315179517|gb|ADT86431.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 577

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +              
Sbjct: 55  PREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADERLGVAKEAQ-- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R QQ       +L +               + K   E   F E     +VK     A
Sbjct: 173 L-ERVQQESGEVSMELSD--------LEAFYRESKKLYDEDAEFAERARNYVVKLQGGDA 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  RD +   +    +  GI+   K K   
Sbjct: 224 FCLDMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKEKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
           + D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 QED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +         ++ +      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEERAKALIESKNPDLGADEKADIATTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF +A     +L  D+            +  E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVASIFAKAGVSPDNLTGDI---------KITEEKEKALIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++ +   +P+ L  YL++LA  F   +           + A +  +   RL+L    A 
Sbjct: 507 VQSVSREGQPHILCSYLFELAGQFSSFYEAC------PILIAEDESVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+++   M
Sbjct: 561 TIKQGLSLLGIKTLERM 577


>gi|51596355|ref|YP_070546.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|81639440|sp|Q66AV1|SYR_YERPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51589637|emb|CAH21267.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
          Length = 576

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/628 (20%), Positives = 238/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F       +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    + +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+FR+A      +D       ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDETSLTLPLVITE----DREAA 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYDLA +F   + H +       + A + ++  
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEEIRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|154148135|ref|YP_001406805.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804144|gb|ABS51151.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 525

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 156/563 (27%), Positives = 280/563 (49%), Gaps = 45/563 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           +++K +   I++E+P++    H +   A  L++     P  IAE +  + +     +   
Sbjct: 8   EIKKILPYDIILEQPKNKNLAHYACPVAFCLAKEFKKSPKIIAEELADKFRNSKIFN--V 65

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            A  G++N  L   +L +I    + +G  +            +E++SANPTGP+H+GH R
Sbjct: 66  SALNGYLNFKLKAEFLAEISGEALKNGENFASEKEKTSPTTLLEYISANPTGPLHIGHVR 125

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            AV GDTL  +  + GY++  EYYINDAG QI+ L +S+  R ++ L   +   P+ YY 
Sbjct: 126 GAVYGDTLQRVSNYLGYKMQTEYYINDAGNQIDLLGISMILRAKE-LAGEEVIYPDKYYR 184

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y+  + K   +K+  E+L     K    + D++   ++KII+ DL    I+   +ISE
Sbjct: 185 GEYIDEILKIAKEKFGDEIL-----KDEKKLSDFAKDEVLKIIKKDLADAGIEISNWISE 239

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +      +   I  L + G +YE                   ++   S   GD+ DR
Sbjct: 240 KSLYN----ELEGTIKKLEKSGKMYE----------------KEGKIWIASIQNGDEKDR 279

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            +++ DG  TY A D+ Y   K+ER FD+ I + G+DH GYV RL+A    +   + ++ 
Sbjct: 280 VVVREDGRPTYLAGDIIYHNNKFERNFDHYINIWGADHHGYVARLKAAINFLGYDENRLE 339

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V+L ++V L ++G   KMSKRAG+ + +  +++E+G D++RF+ + +  +  L+FD  ++
Sbjct: 340 VVLMQMVSLLKNGETFKMSKRAGNVVLMSDILEEIGKDALRFIFISKSGNSPLEFDIDEL 399

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K++   NP+FY+ YA+AR   +F +A      +  + F           D   L L+   
Sbjct: 400 KKEDSTNPIFYINYAHARVNQVFGKAGKNVEQIIDENFEN--------LDEDALNLVFEA 451

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                ++  A  ++   K+  +L  LA  FH +++  R       + ++N      RL++
Sbjct: 452 LRLNEILNEALKSRSLQKIPDFLKSLAGDFHKYYNENR------VIGSDNE---NARLKV 502

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              VA  I +  +++G+E+  +M
Sbjct: 503 FAVVALCIRTAFSLMGLEAKAKM 525


>gi|238809911|dbj|BAH69701.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 550

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/580 (32%), Positives = 289/580 (49%), Gaps = 60/580 (10%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK- 73
           LK I  K+ +EK   D ++IE P+  A    ++N A+      G +P+ +A+ IV  ++ 
Sbjct: 22  LKPILNKLGIEK---DDLLIE-PKVKA--DFASNVALGNK---GKNPMELAKKIVKELEP 72

Query: 74  --IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 + SV IA  GF+N Y+    + K L+ I+     +GR  +     +NIE+VSAN
Sbjct: 73  KLTSLGLKSVEIAAPGFLNFYIDDQTIIKSLNQIIKQNENFGRGKL--KGNLNIEWVSAN 130

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A +G  L ++  F+G  V REYYIND G QINTLA S+F RY+Q  Y 
Sbjct: 131 PTGYLHIGHARNAAIGSALYNICTFAGLNVLREYYINDGGNQINTLAQSIFARYKQ-FYE 189

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDL 249
            D  +PE  Y G  +    +++  K+  +  +  E  ++ L + K   V   +K I+ DL
Sbjct: 190 PDFPMPEDCYGGQDIVWNAEQIRTKHGDKFKDLKELNDEALKVFKKEGVANFLKQIKVDL 249

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K      DI+ SE   +  +   I D I  L                             
Sbjct: 250 KKFKCGFDIWFSEKTLYANNSKRILDTIKKLKNHFEA-------------------DGAT 290

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI-YVMGSDHSGYVKRL 367
             R+T  GDD DR ++KS+G +TYFA D+AY   K++  G D +I  + G+DH  Y+ R+
Sbjct: 291 WLRTTKYGDDKDRVVIKSNGDFTYFAPDIAYHDKKFKNSGKDPIIMNIWGADHLSYITRM 350

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +     +     ++ VL  +LVRL +DG   KMSKR G    LR  VD VG DS RF++L
Sbjct: 351 KIAMQDLGYDPNKLIVLCLQLVRLMKDGQEYKMSKRKGTSFWLRDFVDLVGVDSARFILL 410

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R  +  LDFD      +S +NPVF +QYA AR   + +++K        D+        
Sbjct: 411 DRTYNSKLDFDINIATSKSNDNPVFLIQYANARSYQLLKKSK-------LDVSKLKATNI 463

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++E D    +L+  L E+P VI ++      + L  YL  +A  F+  +S+       + 
Sbjct: 464 DNELD---KKLVSTLLEFPEVIISSATKYLTHLLTQYLIRVAKEFNSWYSNTE-----KI 515

Query: 548 VQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + N    LT+ R     AV  ++ +GL ++GV S ++M
Sbjct: 516 IGSKNEMNSLTIAR-----AVNIVLENGLRLLGVSSKHKM 550


>gi|237753349|ref|ZP_04583829.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375616|gb|EEO25707.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 539

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 166/560 (29%), Positives = 287/560 (51%), Gaps = 45/560 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E+PRD + GH +       ++ L   P  IA+    +++  P + SV +   G++N  
Sbjct: 18  VLEKPRDKSFGHFAL-PTFSFAKTLKKAPQIIAQEFAQKLESIPQIASVSVVN-GYVNFS 75

Query: 93  LSPSYLRKILSSIVVSGIEYG-----RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           LS ++L +     +    +       + +  +  KV +E+VSANPTGP+H+GH R AV G
Sbjct: 76  LSNAFLGQCAWEFLQDDFKESSKLESKKVESRNEKVLLEYVSANPTGPLHIGHARGAVFG 135

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D+LA +  F GY +  EYYINDAGAQI  L  S+++  +  +++   +LP   Y G Y+ 
Sbjct: 136 DSLARIGRFLGYTIHTEYYINDAGAQIQKLGKSIYYAGRALVFSESRELPSECYQGEYVF 195

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +    +    +    E   L  +  +    M+  I+ +L  + I  D ++SE +   
Sbjct: 196 ELAECARAELGESVFESLES--LEKLSVFGKDKMLLEIKSNLAQVGIVFDSYVSERELF- 252

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              S +   +++L     VYE                   +L  +ST  GD+ DR +++ 
Sbjct: 253 ---SQLDSTLESLKAHNGVYES----------------ENKLWLKSTEFGDEKDRVIVRE 293

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
            G  TY A D+ Y K K+ERGF + I + G+DH GY+ R++A    +     ++ VLL +
Sbjct: 294 SGEATYLAGDIIYHKNKFERGFSHYINIWGADHHGYIARVKAALEYLGFDSQKLEVLLAQ 353

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V L +DG+P KMSKRAG+FI ++ VVDEVG+D++R M L +K    L+FD   +K+Q  
Sbjct: 354 MVALLKDGIPFKMSKRAGNFILMKDVVDEVGADALRLMFLSKKPDTHLEFDVELLKKQDS 413

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQLIVHLAEY 505
            NPV+Y+ YA+AR  ++F ++     +   +      + Q   +D  E    L+V     
Sbjct: 414 SNPVYYINYAHARIHTLFSKS-----NFTMESLKALSLEQYKAWDLQESLRDLLVLALGI 468

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
            +V+ +A   +   K+  YLY L++ FH  ++        + +  +  +     L+++  
Sbjct: 469 EKVLSDAFSQRLINKVVDYLYTLSADFHRFYN------ETKILNTDQEEQI---LKVLVV 519

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA  +  GL+++GV++  +M
Sbjct: 520 VAHSLALGLDLLGVKAKVKM 539


>gi|186684132|ref|YP_001867328.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689424|sp|B2J6I0|SYR_NOSP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|186466584|gb|ACC82385.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 584

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 140/627 (22%), Positives = 246/627 (39%), Gaps = 85/627 (13%)

Query: 1   MYLFAD-FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M    +    +L+  L         +   +D I++    +   G    N A+ LS+ LG 
Sbjct: 1   MNATQEKLKVQLEQAL---VAAFGADFAGVDPILVSAS-NPKFGDYQANVALSLSKKLGK 56

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA  IV ++ +    +   IAG GFINL L  +YL   L+ I       G      
Sbjct: 57  QPRAIAGAIVEKLDVSEICEPPEIAGPGFINLKLKTAYLEAQLNDIQAD-PRLGVPAAKT 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             + N++F S N    MHVGH R  ++GD++A ++ F G++V R  ++ D G Q   L  
Sbjct: 116 PKRENVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIA 175

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----- 234
            +   Y  AL   ++ L  G     Y K      A +       F E     +V+     
Sbjct: 176 YLREVYPDALTTANA-LDIGDLVSFYRK------AKQRFDTDTAFQETARQEVVRLQAGA 228

Query: 235 ---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               ++ + + +  R + + +    DI ++E      +P  +  I+++L + G + E   
Sbjct: 229 EDTLHAWKLLCEQSRREFQVIYELLDIKLTERGESFYNP-LLSGIVEDLEKSGLLVEN-- 285

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FD 350
                +  +   ++       +   G+ +   + KSDG Y Y   DLA  + + ++    
Sbjct: 286 -----QGAKCVFLEG-----FTNREGEPLPLIVQKSDGGYNYATTDLASLRYRIQQDQAK 335

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +IYV  +    +  +   VA         +  V +   + L  DG   K   R+GD + 
Sbjct: 336 RIIYVTDAGQGNHFAQFFQVARKAGWIPDDVELVHVPFGLVLGEDGK--KFKTRSGDTVR 393

Query: 410 LRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFD 438
           LR ++DE                               VG  +V++  L +  +    F 
Sbjct: 394 LRDLLDEAVSHAHADLKTRLQKEERQETEEFINEVARVVGISAVKYADLSQNRTSNYIFS 453

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + K+ +  K N   Y+ Y YAR   I R+      D++F     N +  + E    EL L
Sbjct: 454 YDKMLDL-KGNTAPYMLYVYARIHGISRKG-----DINFKELGNNAVLLQHET---ELAL 504

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
             +L +   VI +      P +L  YL++L+  F+  +           +QA   +    
Sbjct: 505 AKYLLQLDEVISSVEQDLLPNRLCEYLFELSQKFNQFYDRC------SILQAEEPQ-RTS 557

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L    A  +  GL+++G++    M
Sbjct: 558 RLVLCDLTARTLKLGLSLLGIQVLERM 584


>gi|308189960|ref|YP_003922891.1| hypothetical protein MFE_04110 [Mycoplasma fermentans JER]
 gi|319777242|ref|YP_004136893.1| arginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624702|gb|ADN69007.1| hypothetical protein MFE_04110 [Mycoplasma fermentans JER]
 gi|318038317|gb|ADV34516.1| Arginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 542

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/580 (32%), Positives = 289/580 (49%), Gaps = 60/580 (10%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK- 73
           LK I  K+ +EK   D ++IE P+  A    ++N A+      G +P+ +A+ IV  ++ 
Sbjct: 14  LKPILNKLGIEK---DDLLIE-PKVKA--DFASNVALGNK---GKNPMELAKKIVKELEP 64

Query: 74  --IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                 + SV IA  GF+N Y+    + K L+ I+     +GR  +     +NIE+VSAN
Sbjct: 65  KLTSLGLKSVEIAAPGFLNFYIDDQTIIKSLNQIIKQNENFGRGKL--KGNLNIEWVSAN 122

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           PTG +H+GH R A +G  L ++  F+G  V REYYIND G QINTLA S+F RY+Q  Y 
Sbjct: 123 PTGYLHIGHARNAAIGSALYNICTFAGLNVLREYYINDGGNQINTLAQSIFARYKQ-FYE 181

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDL 249
            D  +PE  Y G  +    +++  K+  +  +  E  ++ L + K   V   +K I+ DL
Sbjct: 182 PDFPMPEDCYGGQDIVWNAEQIRTKHGDKFKDLKELNDEALKVFKKEGVANFLKQIKVDL 241

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K      DI+ SE   +  +   I D I  L                             
Sbjct: 242 KKFKCGFDIWFSEKTLYANNSKRILDTIKKLKNHFEA-------------------DGAT 282

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI-YVMGSDHSGYVKRL 367
             R+T  GDD DR ++KS+G +TYFA D+AY   K++  G D +I  + G+DH  Y+ R+
Sbjct: 283 WLRTTKYGDDKDRVVIKSNGDFTYFAPDIAYHDKKFKNSGKDPIIMNIWGADHLSYITRM 342

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           +     +     ++ VL  +LVRL +DG   KMSKR G    LR  VD VG DS RF++L
Sbjct: 343 KIAMQDLGYDPNKLIVLCLQLVRLMKDGQEYKMSKRKGTSFWLRDFVDLVGVDSARFILL 402

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            R  +  LDFD      +S +NPVF +QYA AR   + +++K        D+        
Sbjct: 403 DRTYNSKLDFDINIATSKSNDNPVFLIQYANARSYQLLKKSK-------LDVSKLKATNI 455

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           ++E D    +L+  L E+P VI ++      + L  YL  +A  F+  +S+       + 
Sbjct: 456 DNELD---KKLVSTLLEFPEVIISSATKYLTHLLTQYLIRVAKEFNSWYSNTE-----KI 507

Query: 548 VQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + N    LT+ R     AV  ++ +GL ++GV S ++M
Sbjct: 508 IGSKNEMNSLTIAR-----AVNIVLENGLRLLGVSSKHKM 542


>gi|256372578|ref|YP_003110402.1| arginyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009162|gb|ACU54729.1| arginyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 540

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 176/582 (30%), Positives = 277/582 (47%), Gaps = 51/582 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   + E      +   +    ++E PR+ AHG L+T  A+ L+R +G+ P  +AE
Sbjct: 7   LHEVLVTAVHEELRARGIADAVEVGPLVE-PRERAHGDLATPIALELARTVGVAPRVLAE 65

Query: 67  LIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            +VAR++  +   V+ + +AG GF+N++LSP+ L   + ++           +G G +  
Sbjct: 66  ALVARLEPRVAGRVERLEVAGPGFVNIHLSPAALLGDVQAMAADLAAALAVDVGHGARAL 125

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EFVSANPTGP+H+G+   ++ GD LA L+A  G+EV+REYY+ND G QI +L  S+   
Sbjct: 126 VEFVSANPTGPLHIGNGWLSIYGDALARLLAHGGFEVSREYYVNDTGGQIRSLGASILAA 185

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +         +PE  Y G Y+     EL+ +Y           W       +V  ++ +
Sbjct: 186 RR------GEPIPEEGYRGDYV----HELSGRYDGPDDVVAAGSW-------AVPEILAM 228

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           IR  L+ LNI  D + S+     G    + +++  L+     YE                
Sbjct: 229 IRATLEELNIHFDSWYSQAAIEGG--GLVEEVVARLSALDATYEA--------------- 271

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGY 363
               L F +   GD  DR L K++G YTY A D+AY   K   RGFD  I V G+DH G 
Sbjct: 272 -DGALWFAAERFGDTRDRVLRKANGDYTYLAGDIAYHYDKLVVRGFDLAIDVFGADHHGQ 330

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V  L A   A+     ++ + L ++V L  +G  +K SKRAG  I L  +V E+G+D+ R
Sbjct: 331 VASLHAAMRALGIDDRRLEIRLGQMVSLLDNGAAVKFSKRAGTAIALSWLVKELGADATR 390

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
            + L          D  K + +S ENPV+Y+QYA+AR  ++ RQA  +   LD       
Sbjct: 391 LLALSSSIDRASQVDLVKARAESSENPVYYIQYAHARVAALRRQAAAMGLALD------P 444

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                +     EL+L   L    RV+E A + + P+++  +L + AS FHG +       
Sbjct: 445 AASLTALGHPRELELARVLLRLNRVLETAIVERAPHRVVAWLLEAASAFHGFYHDC---- 500

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   +  +   R  L      ++   L +IGV +  EM
Sbjct: 501 --PILVEPDPLVRGARFALADLTGQVLARTLALIGVRAVEEM 540


>gi|304396251|ref|ZP_07378133.1| arginyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356620|gb|EFM20985.1| arginyl-tRNA synthetase [Pantoea sp. aB]
          Length = 594

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 124/613 (20%), Positives = 231/613 (37%), Gaps = 71/613 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  + L   + +             ++   +      G    N  M +++ LG  P  +A
Sbjct: 20  NIQALLSAKVSQAMVLAGAPADCEPQVR--QSARVQFGDYQANGIMAVAKKLGQAPRQLA 77

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E ++  + +      V IAG GFIN++L  ++L       +   +      + +   + +
Sbjct: 78  EAVIQHLDLTGIASKVEIAGPGFINIFLDHNWLATHARQALS--LPRLGVQLAEPQTIVV 135

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L       +
Sbjct: 136 DYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA-----F 190

Query: 186 QQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +   N D  ++      G Y +      A +   E   F E     +VK        + 
Sbjct: 191 LEKQQNEDHAEMALADLEGFYRE------AKRTYDEDPEFAERARSYVVKLQGGDEYCRQ 244

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +   L  + +  +  I    + R + +  R+ +   +    +  GI+   K K     + 
Sbjct: 245 MWKKLVDITMSQNQKI----YDRMNVTLTRNDVMGESLYNDMLPGIVSDLKQKGLA-VES 299

Query: 305 DRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
           +   ++F        G+ +   + K DG Y Y   D+A  K +YE    + ++Y + S  
Sbjct: 300 EGATVVFLDEFQNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLKANRVLYYIDSRQ 359

Query: 361 SGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
             ++ +   +          + +      + L +DG P K   R+G  I L  ++DE   
Sbjct: 360 HQHLVQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGRPFK--TRSGGTIKLSDLLDEAYQ 417

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    FD+  +    + N   
Sbjct: 418 RAYSLVREKNPEMSEAEVKTLAEVVGISAVKYADLSKSRTTDYIFDWDNML-AFEGNTAP 476

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAY R  S+FR+A      LD ++            +  E QL   L ++  VI   
Sbjct: 477 YMQYAYTRVLSVFRKAGINADSLDAEIVIS---------EEREAQLATRLLQFEEVITQV 527

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ +  YLYDLA +F G + H         + A +    + RLQL    A  +  
Sbjct: 528 ARDGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESDATRLSRLQLAALTAKTLKQ 581

Query: 573 GLNIIGVESPNEM 585
           GL+ +G+++   M
Sbjct: 582 GLDTLGIDTVERM 594


>gi|330877954|gb|EGH12103.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 578

 Score =  432 bits (1110), Expect = e-118,   Method: Composition-based stats.
 Identities = 128/610 (20%), Positives = 239/610 (39%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +++ L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQHALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + + L   L + +    +      G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQNTAALASRLDAALAD-PQLSVRKAGTAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H        + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----QTYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D  +Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD    +++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGHIVLEA----PQEQELAARLAQFNETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|322513913|ref|ZP_08066990.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120248|gb|EFX92201.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 584

 Score =  432 bits (1110), Expect = e-118,   Method: Composition-based stats.
 Identities = 125/616 (20%), Positives = 236/616 (38%), Gaps = 70/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           Y+F +    L + +K+       E  +    ++ +      G    N AM  ++ LG++P
Sbjct: 7   YIFVNIQQILSDKIKQAMIAAGAESNV--EPLVRQSGKPEFGDYQANGAMGAAKKLGMNP 64

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ I+    ++   D + IAG GFIN++L+  +L    S  + +     +       
Sbjct: 65  REFAQKILDNADLNGIADKLEIAGPGFINIFLNQQWLASQASEALQAVNFGIKTA--NPQ 122

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + I++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   +
Sbjct: 123 TIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYL 182

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                +     +    E +Y            A ++      F E+    +VK  S    
Sbjct: 183 EKMENEHASQMELSDLEAFYRA----------AKEHYDSDEVFAEKARNYVVKLQSGDEY 232

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + +   L  + + H+     +++ R + +     +   +    +   I+   K+K    
Sbjct: 233 CRTMWKKLVDITMHHNQ----ENYDRLNVTLSEKDVMGESLYNPMLPEIVADLKAKGLAV 288

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D   ++F        GD +   + K DG + Y   D+A  K +YE    D ++    
Sbjct: 289 ED-DGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRVLVFSD 347

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++DE
Sbjct: 348 SRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLDE 405

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   SV++  L +  +    FD+  +    + N
Sbjct: 406 AVERADKLISERSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGN 464

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R RSIF +A      L+ ++            +  E  L V L ++  V+
Sbjct: 465 TAPYMQYAYTRIRSIFNRAGINANGLNGEI---------GLIEDKERALAVKLLQFEEVL 515

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  YLY+LA  F   +           + A    +   RL+L    A  
Sbjct: 516 NGVAKDGMPHILCQYLYELAGAFSSFYEAC------PMLNAE-ENVKNSRLRLATLTAKT 568

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+++  +M
Sbjct: 569 LKQGLDLLGIKTIEKM 584


>gi|108811686|ref|YP_647453.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229901967|ref|ZP_04517088.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|122980195|sp|Q1CJH7|SYR_YERPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|108775334|gb|ABG17853.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229680863|gb|EEO76958.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|320015277|gb|ADV98848.1| arginyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 576

 Score =  432 bits (1110), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/628 (20%), Positives = 238/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F       +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFSLRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    + +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+FR+A      +D       ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDETSLTLPLVVTE----DREAT 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYDLA +F   + H +       + A + ++  
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEEIRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|24375609|ref|NP_719652.1| arginyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38372524|sp|Q8E9Y7|SYR_SHEON RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24350506|gb|AAN57096.1|AE015843_8 arginyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 581

 Score =  432 bits (1110), Expect = e-118,   Method: Composition-based stats.
 Identities = 134/615 (21%), Positives = 252/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNVAMMLTKAAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  S L   L + +  G E+    +     V ++
Sbjct: 65  LIIDNLPASAYVAKVEIAGPGFINFFIDDSALANQLQAAI--GDEHLGIKLPAPQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
              +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 ANGEQAQLELSDLETFYRAAKLRFDESAEFATRARQLVVALQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +  + L +         E  ++    + +  ++++LA +G + E       S   
Sbjct: 242 LSHCHEVYERLGVSLTRADVHGESAYN----ADLEQVVNDLAAKGLLTE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR T  G+ +   + K+DG Y Y   DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEE----FR-TKEGEPLPVIIQKADGGYLYATTDLAAMRYRSNVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R G  + L  ++DE 
Sbjct: 346 RQALHFQQVFSLAKLAKFVREDMSLEHLGFGTMNGEDGRPFK--TRTGGVVKLVDLLDEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NTRALELVRSKNPDMDEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDVDLSQAKIVLE----HEKEKDLGNKLAQFGEILS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    AS +
Sbjct: 513 RVVDKGQPHVLCGYLYELAGAFSSFYEAC------PVLAADNDEQKHSRLLLSQLTASTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|22126152|ref|NP_669575.1| arginyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441691|ref|NP_993230.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108807424|ref|YP_651340.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|145598372|ref|YP_001162448.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366025|ref|ZP_01888060.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162421704|ref|YP_001606856.1| arginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926439|ref|ZP_02222271.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938879|ref|ZP_02227433.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009270|ref|ZP_02230168.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210482|ref|ZP_02236517.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401417|ref|ZP_02306914.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420373|ref|ZP_02312126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424725|ref|ZP_02316478.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218929153|ref|YP_002347028.1| arginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229894757|ref|ZP_04509937.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229897461|ref|ZP_04512617.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898107|ref|ZP_04513256.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|270490849|ref|ZP_06207923.1| arginine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503888|ref|YP_003567950.1| arginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|21542252|sp|Q8ZEV7|SYR_YERPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123245827|sp|Q1C827|SYR_YERPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166200588|sp|A4TJL3|SYR_YERPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238687249|sp|A9QYY6|SYR_YERPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21959114|gb|AAM85826.1|AE013829_6 arginine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436553|gb|AAS62107.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108779337|gb|ABG13395.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347764|emb|CAL20681.1| arginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210068|gb|ABP39475.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292438|gb|EDM42512.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162354519|gb|ABX88467.1| arginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913242|gb|EDR31865.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921660|gb|EDR38857.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991825|gb|EDR44126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207662|gb|EDR52142.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962068|gb|EDR58089.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049113|gb|EDR60521.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056607|gb|EDR66376.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229688823|gb|EEO80890.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693798|gb|EEO83847.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229702230|gb|EEO90249.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361993|gb|ACY58714.1| arginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365870|gb|ACY62427.1| arginyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270339353|gb|EFA50130.1| arginine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354347|gb|ADE64688.1| arginyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 576

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/628 (20%), Positives = 238/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F       +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    + +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+FR+A      +D       ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDETSLTLPLVVTE----DREAT 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYDLA +F   + H +       + A + ++  
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNAESEEIRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|16332034|ref|NP_442762.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501048|sp|Q55486|SYR_SYNY3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1001346|dbj|BAA10833.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
          Length = 584

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 145/619 (23%), Positives = 253/619 (40%), Gaps = 78/619 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             ++L ++  +           L   ++    +   G    N A+ L++ LG  P  IA 
Sbjct: 4   ILTQLNDHFAQALEGQFPSDVTLPTPLVVPASNPKFGDFQCNIALPLAKQLGQPPRAIAM 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV ++ +    + + IAG GFIN+ L P YL + L   +    + G +L+    ++ ++
Sbjct: 64  EIVDKVNLSEICEPLTIAGPGFINIKLLPDYLGEQLIK-LQQNQQLGVSLVKGEERIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD LA ++ F GY+V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDWGTQFGMLITYLKEVYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +AL   D+              +G +L   Y      F +++     ++ S QA++ +  
Sbjct: 183 EALVTADA------------LDIG-DLVTFYKQAKQRFDQDEQ---FRETSRQAVVALQA 226

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM- 304
            D K++       + E    R +   I D +D  +  +G  +     P   +  Q+ D+ 
Sbjct: 227 GDAKSIKAW--QLLCEQS--RREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLL 282

Query: 305 ---DRKQLLFRSTMVGDDVDR---PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
              +  Q +F       D DR    + KSDG Y Y   DLA    +    G + +IYV  
Sbjct: 283 VEDNGAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  + +  +   VA           V+      L +     K+  RAGD I L+ ++ E 
Sbjct: 343 AGQANHFAQFFQVAEKAGILTDPTQVVHVPFG-LVKGEDGKKLKTRAGDTIRLKDLLTEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG  +V++  L +  +    F F K+    
Sbjct: 402 VTRARQDLETRLTAEERSETEEFKTEVAQRVGIGAVKYADLSQNRTSDYVFSFDKMLAL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAYAR +SI R+    F  +D          +    + +EL L  +L ++ 
Sbjct: 461 QGNTAPYMLYAYARIQSISREGGIDFAQMDSG--------EIVLTEPTELVLAKNLLQFA 512

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            VIE   I+  P +L  YLY+L+ VF+  + +         ++A++ +    RL L    
Sbjct: 513 DVIETVEISLLPNRLCDYLYELSKVFNRFYENC------PVLKASDPQ-RGSRLLLCDLT 565

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+   + M
Sbjct: 566 ARTLKLGLSLLGIPVLDRM 584


>gi|291617771|ref|YP_003520513.1| ArgS [Pantoea ananatis LMG 20103]
 gi|291152801|gb|ADD77385.1| ArgS [Pantoea ananatis LMG 20103]
          Length = 576

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 236/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S+++   +         E +      + +      G    N  M +++ LG  
Sbjct: 1   MNIQALLSAKVSQAMVLAGAPSDCEPQ------VRQSAKVQFGDYQANGIMAVAKKLGQA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L   +L +   + +            + 
Sbjct: 55  PRQLAETVIQHLDLTGIASKVEIAGPGFINIFLDRGWLAEHARNALQHPRLGV--ACVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAF 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++    N +++      G Y +      A +   E   F E     +VK      
Sbjct: 173 L----EKQQNENHAEMALADLEGFYRE------AKRTYDEDPEFAERARRYVVKLQGGDD 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  R  +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWKKLVDITMSQNQHI----YDRLNVTLTRKDVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D +IY +
Sbjct: 279 -VESEGATVVFLDEYQNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVIYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++++   +          + +      + L +DG P K   R+G  I L  ++D
Sbjct: 338 DSRQHQHLQQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGRPFK--TRSGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAYDRAYSLVSEKNPEMSEEERRALAEVVGVSAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A      +  D+         +  D  E  L   L ++  V
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAGIEADAIQADI---------TLTDDREALLATRLLQFEEV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYD+A +F G + H         + A +      RLQ+    A 
Sbjct: 506 ITQVARDGTPHVMCAYLYDVAGLFSGFYEHC------PILAAEDEATRQSRLQIAALTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++ + M
Sbjct: 560 TLKLGLDTLGIKTVDRM 576


>gi|222824086|ref|YP_002575660.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782949|sp|B9KCX0|SYR_CAMLR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222539308|gb|ACM64409.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 531

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 165/564 (29%), Positives = 288/564 (51%), Gaps = 42/564 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++++K+    ++E P++    H +T  A  L++ L  +P+ IA  IV ++K     +SV 
Sbjct: 8   EIKEKLGRDFILENPKNKNLAHFATPLAFSLAKELKQNPMIIANDIVVKLKDCDCFESVE 67

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            A  G++N  LS ++L  + +  +     + ++   K     +E+VSANPTGP+H+GH R
Sbjct: 68  -ALNGYVNFKLSKAFLNSLATQALSDSENFAKDD-KKEQSFLLEYVSANPTGPLHIGHAR 125

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            A+ GDTL  +    GY+   EYY+NDAG QI  L LS+    ++         P+ YY 
Sbjct: 126 GAIFGDTLTRVARHLGYKFDTEYYVNDAGNQIYLLGLSILLAVKEHCLKEQVQYPDEYYK 185

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y+  V KE   ++     +F  E+ +P +  ++   M+KII+ +L    I  D ++SE
Sbjct: 186 GEYIIDVAKEAFAEFEK---DFFVEENIPQLALWAKDKMLKIIKQNLADAKIFIDAYVSE 242

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++    S + + +  L   G  YE                   ++   S++ GD+ DR
Sbjct: 243 TSYY----SELENTLKALKEHGGTYE----------------QDGKIWLASSVKGDEKDR 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            ++K DG  TY AAD+ Y K K  RG+D  I + G+DH GY+ R++A    +      + 
Sbjct: 283 VIIKDDGKGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIARMKAAMEFLGHDSQNLE 342

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           ++L ++V L ++G P KMSKRAG+FI +  V++E+GSD +R++ + +K    L+FD  + 
Sbjct: 343 IILAQMVSLLKNGEPYKMSKRAGNFILMGDVLEELGSDVLRYIFISKKCDTHLEFDVDEF 402

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K++   NPV+Y+ YA+AR   +F +A     D+ +  F           +   + L+   
Sbjct: 403 KKEDSSNPVYYINYAHARIHQVFAKAGKSVDDVMYAKFES--------LNEDGMNLLFES 454

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                V+ +A  ++   K+  YL +LAS+FH  ++        + V ++N       L+L
Sbjct: 455 LNLKAVLNDAFESRSLQKIPDYLKNLASLFHKFYNEN------KVVGSDNEDEF---LKL 505

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
               A  I     ++G+E+ N+M+
Sbjct: 506 FAICALSIKIAFALMGIEAKNKMN 529


>gi|186895396|ref|YP_001872508.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|238691368|sp|B2K312|SYR_YERPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|186698422|gb|ACC89051.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 576

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 126/628 (20%), Positives = 238/628 (37%), Gaps = 95/628 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +          + 
Sbjct: 55  PRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----D 235
               Y + + N ++        G+    +  + A K   E   F       +VK     +
Sbjct: 172 ----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDE 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYV 286
           Y  Q   K++   +    + +D           + E  ++   P    +I+ +L  +G  
Sbjct: 223 YCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EIVADLKAKGLA 278

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E       S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE
Sbjct: 279 VE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYE 326

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRA 404
             G D ++Y + S    ++ +   +          + +      + L +DG P K   R+
Sbjct: 327 TLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRS 384

Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437
           G  + L  ++DE                           VG  +V++  L +  +    F
Sbjct: 385 GGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIF 444

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D+  +      N   Y+QYAY R  S+FR+A      +D       ++  E      E  
Sbjct: 445 DWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDETSLTLPLVITE----DREAA 494

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L   L ++  +I        P+ +  YLYD+A +F   + H +       + A + ++  
Sbjct: 495 LATRLLQFEEIITTVAREGTPHVMCSYLYDVAGLFSSFYEHCQ------ILNAESEEIRQ 548

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL+L    A  +  GL+ +G+++   M
Sbjct: 549 SRLKLAMLTAKTLKQGLDTLGIQTVERM 576


>gi|159030666|emb|CAO88336.1| argS [Microcystis aeruginosa PCC 7806]
          Length = 585

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 143/620 (23%), Positives = 237/620 (38%), Gaps = 79/620 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++K    +   K   E       +I    +   G    N ++ L++ L   P  +A 
Sbjct: 4   IIQQIKERFSQSLVKSFGENFTDTDPLIVAASNPRFGDYQCNISLSLAKELKQKPREVAA 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  ++ID       IAG GFINL L P YL   L  ++      G        K+ ++
Sbjct: 64  TLLKNLEIDDLCQPPEIAGPGFINLTLKPGYLETQLKDLITDN-RLGVATANPSQKIIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD +A ++ F  ++V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYSV 238
            AL   D+ L  G     Y K      A     E  NF E     +VK          + 
Sbjct: 183 SALTQADA-LDLGDLVSFYKK------AKIRFDEDENFKETARQAVVKLQSGDPQSRQAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q + +  R + + +    DI ++E      +P  +  +I  L +QG + E          
Sbjct: 236 QLLCQQSRREFQKIYDILDIKLTERGESFYNPY-LETVIRELEQQGLLIE-------DNG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
                +D       +   GD +   + KSDG Y Y   DLA    +  E   + +IYV  
Sbjct: 288 ALCVFLDG-----FTNKEGDPLPLIVKKSDGGYNYATTDLAAICYRVREDKAERIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +  + +  ++  VA         + V+     + L  DG   K+  R+G+ + L+ ++D+
Sbjct: 343 AGQANHFAQVFQVAKKAGFLPDNVAVVHVAFGLVLGEDGK--KLKTRSGETVKLQELLDQ 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +  +    F + K+   
Sbjct: 401 AIACSLADLEKRLASEEREETGDFIANTAETVGLSAVKYADLSQNRNSNYVFSYDKMLNL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAYAR +SI R+    F DL  +             D SEL L   L + 
Sbjct: 461 -QGNTAPYMLYAYARVQSISREGGINFQDLSAN-------SPLILKDESELILAKQLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P VI        P +L  YLY+L+  ++  + +    P L+        +   RL L   
Sbjct: 513 PEVISAVEEDLLPNRLCDYLYELSKKYNRFYENC---PVLKAA----EPIKTSRLVLCDL 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+++G+     M
Sbjct: 566 TARTLKLGLSLLGIPVLERM 585


>gi|75909766|ref|YP_324062.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|109894972|sp|Q3M769|SYR_ANAVT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|75703491|gb|ABA23167.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 588

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 133/623 (21%), Positives = 240/623 (38%), Gaps = 73/623 (11%)

Query: 1   MYLF-ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M         +L+  L         E   +D I++    +   G    N A+ LS+ LG 
Sbjct: 1   MNATQEQLKVKLEQAL---IAAFGDEYAGVDPILVTAS-NPKFGDYQANVALSLSKKLGQ 56

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA  IV ++ +    ++  IAG GFINL L  +YL   L++I       G      
Sbjct: 57  PPRAIASAIVEKLDVSEICETPEIAGPGFINLKLKTAYLEAQLNAIQAD-SRLGVPTAKH 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    MHVGH R  ++GD++A ++ F G++V R  ++ D G Q   L  
Sbjct: 116 PQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLIT 175

Query: 180 SVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +     +AL      +  DL   Y          +   +    E++         +   
Sbjct: 176 YLREVSPEALTTANALDIGDLVSFYRQAKQRFDADEAFQETARQEVVRLQAGATDTL--- 232

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++ + + +  R + + +    D+ ++E      +P  +  +++ L   G + E       
Sbjct: 233 HAWKLLCEQSRQEFQVIYDLLDVKLTERGESFYNP-LLPTVVEGLEASGLLVEN------ 285

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIY 354
            +  +   +D       +   G+ +   + KSDG Y Y   DLA  + + ++     ++Y
Sbjct: 286 -QGAKCVFLDG-----FTNREGEPLPLIVQKSDGGYNYATTDLAALRYRIQKDEAKRIVY 339

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V  +  + +  +   VA         +  V +   + L  DG   K   R+GD + LR +
Sbjct: 340 VTDAGQANHFAQFFQVARKAGWIPNDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDL 397

Query: 414 VDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           +DE                               VG  +V++  L +  +    F + K+
Sbjct: 398 LDEAVSRAHADLEERLKAEEREETPEFIDKVAEVVGISAVKYADLSQNRTSNYIFSYDKM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +  K N   Y+ YAYAR + I R+    F DL  +        +      +E  L  +L
Sbjct: 458 LDL-KGNTAPYMLYAYARIQGISRKGGINFADLGDNA-------KVILQHDTEFALAKYL 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +   VI        P +L  YLY+L+  F+  +   +       V +    L   RL L
Sbjct: 510 LQLGEVISTVEADLLPNRLCEYLYELSKKFNTFYDRNQGV----QVLSAEEPLRTSRLVL 565

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL+++G++    M
Sbjct: 566 CDLTARTLKLGLSLLGIQVLERM 588


>gi|261491990|ref|ZP_05988566.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495282|ref|ZP_05991734.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309047|gb|EEY10298.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312361|gb|EEY13488.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 575

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 238/617 (38%), Gaps = 74/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +        VE       ++ +      G    N AM  ++ LG++
Sbjct: 1   MNIQQILSDKIKQAMVASGADSNVEP------LVRQSGKPEFGDYQANGAMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+    ++   D + IAG GFIN++L+P +L +  +S + +     +      
Sbjct: 55  PREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQAVNFGIKTA--NP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   +AF G  V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     + +   +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHVSEMELSDLEAFYRA----------AKEHYDSDEAFAEKARNYVVKLQSSDK 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + + H+     ++++R + +     +   +    +   I+   K+K   
Sbjct: 223 YCLTMWKKLVDITMHHNQ----ENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   ++F        GD +   + K DG + Y   D+A  K +YE    D  +   
Sbjct: 279 VED-DGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++D
Sbjct: 338 DSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   SV++  L +  +    FD+  +    + 
Sbjct: 396 EAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A     ++D D    ++       +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFARA-----NIDEDALSGSI----QLNEPKERALAVKLLQFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ L  YLY+LA  F   +           + A        RL+L    A 
Sbjct: 506 LNGVAKEGMPHILCQYLYELAGSFSSFYEAC------PILNAE-ETTKNSRLKLAALTAK 558

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 559 TLKQGLDLLGIKTVEKM 575


>gi|307150379|ref|YP_003885763.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980607|gb|ADN12488.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 585

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 144/623 (23%), Positives = 240/623 (38%), Gaps = 81/623 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +      R    LK    +   E + L    +    +   G   +N A+ L++PL   P 
Sbjct: 4   IIEQLKQRFTQALKIAFEQDFTEIEGL----VVPATNPKFGDYQSNVALSLAKPLKQSPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE +V  ++I    +   IAG GFIN  L  SYL   + SI+      G        K
Sbjct: 60  AIAEQLVKALEISDLCEPPQIAGPGFINFTLKRSYLENQI-SILQKDPRLGVEKAAPPQK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I+F S N    MHVGH R  ++GD LA ++ F G+EV R  ++ D G Q   L   + 
Sbjct: 119 IVIDFSSPNIAKEMHVGHLRSTILGDCLARILEFRGHEVLRLNHVGDWGTQFGMLIAYLR 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
             Y  AL   ++ L  G     Y K      A     E   F EE    +VK        
Sbjct: 179 EVYPDALTTANA-LDLGDLVSFYKK------AKIRFDEDETFKEEARQEVVKLQAGANDS 231

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            ++ Q + +  R + + +    DI + E      +P  +  I+  L  QG + E      
Sbjct: 232 GHAWQLLCEQSRREFQGIYDILDIKLVERGESFYNP-MLSGILTQLDEQGLLTE------ 284

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMI 353
             +  +   ++       +   G+ +   + KSDG Y Y   DLA  K + E+     +I
Sbjct: 285 -DQGAKCVFLEG-----FTNKEGEPLPLIVQKSDGGYNYATTDLAALKYRVEQDQATRII 338

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV  +  + +  ++  VA         + V+      + +     K+  R+G+ I L+ +
Sbjct: 339 YVTDAGQANHFAQVFQVAKKAGILPENVEVVHVAFG-IVKGEDGKKLKTRSGETIKLKDL 397

Query: 414 VDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           +DE                               VG  ++++  L +       F + K+
Sbjct: 398 IDEAIAHARRDLETRLSSDERTESQEFINHVAQGVGISAIKYADLSQNRVSDYIFSYDKM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+ YAYAR +SI R+    F  LD               + +EL L   L
Sbjct: 458 LAL-QGNTAPYMLYAYARVQSISREGNIDFNQLDEGASVL-------LTEEAELVLSKCL 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +   VI++      P +L  YLY+L+  F+  +           +++ +  +   RL L
Sbjct: 510 LQLTEVIQDVERDLLPNRLCEYLYELSKKFNKFYETC------PVLKSEDP-IKTSRLIL 562

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL ++G+     M
Sbjct: 563 CDLTAKTLKLGLFLLGISVLERM 585


>gi|238783286|ref|ZP_04627311.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715879|gb|EEQ07866.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 576

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 234/617 (37%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E +      + +      G    N  M +++ +G+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAGSEAQ------VRQSAKAQFGDYQANGVMAVAKKMGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L   ++   +   + +          + 
Sbjct: 55  PRQLAEKVIELLDLEGIASKVEIAGPGFINIFLDRQWVASKVEFALTAPKLGV--APVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     ++  + D    E +Y          + A K   E   F       +VK  S   
Sbjct: 173 LEKMQNESASDMDLSDLELFY----------QQAKKTYDEDEEFALRARAYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDITMAQNQIA----YDRLNVTLTTDDVMGESLYNAMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        G+ +   + K DG Y Y   D+A  K +YE  G D ++Y +
Sbjct: 279 -VESDGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +    ++ +   +          + +      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +      
Sbjct: 396 EAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALD-G 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F++A      +D +     ++  E      E  L   L ++  V
Sbjct: 455 NTAPYMQYAYTRVVSVFKRAG-----VDENSLTLPLVITE----DREAALATRLLQFEEV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYD+A +F   + H +       + A + ++   RL+L    A 
Sbjct: 506 ITTVAREGTPHVMCSYLYDVAGLFSSFYEHCQ------ILNAASEEIRQSRLKLAMLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+ +   M
Sbjct: 560 TLKQGLDTLGIRTVERM 576


>gi|212711950|ref|ZP_03320078.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM
           30120]
 gi|212685472|gb|EEB45000.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM
           30120]
          Length = 576

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 125/617 (20%), Positives = 233/617 (37%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         +       ++ +      G    N  M  ++ +G+ 
Sbjct: 1   MNIQAILSDKISAAMLAAGAPEGCDA------LVRQSAKAQFGDYQANGVMGAAKKMGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE IV+++ ++     V IAG GFIN+++ P+++       + S          K 
Sbjct: 55  PRQLAEQIVSQLDLEGIASKVEIAGPGFINIFIDPTWIAAHAEKALTSDRLG--LAPVKA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A    F G++V R  ++ D G Q   L   
Sbjct: 113 ETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIGHKVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + + N D+          + +      A K+  E  +F       +VK  S   
Sbjct: 172 ----YLEKVQNEDASDMALADLEEFYRE-----AKKHYDEDEDFAVRARGYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +     + + R + +   D +   +    +  GI+   K+K   
Sbjct: 223 YCRKMWRKLVDITMQQNQ----ETYRRLNVTLTEDDVMGESLYNSMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG + Y   D+A  K +YE    D  +Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DSRQHQHLMQAWTIVRKAGYIPESMALEHHMFGMMLGKDGKPFK--TRSGGTVRLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAQTLIREKNPDMAEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A     DL   +               E+ L   L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKKADITESDLTLPIVLEA---------PHEMALATRLMQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   + H         + A+       RL+L      
Sbjct: 506 ILTVAREGTPHVMCAYLYDLAGLFSSFYEHC------PILSADTDAQRQSRLKLALLTQK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKVGLDTLGIETVERM 576


>gi|260772372|ref|ZP_05881288.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611511|gb|EEX36714.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 577

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 128/622 (20%), Positives = 236/622 (37%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG++
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKQLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS ++L +     +            + 
Sbjct: 55  PREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSETFLAQQAELALADAHLGVNKA--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  +
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------FPEEKWLPI 232
           +    QQ   +    +DL   Y     L    +E A K  + ++       F  E W  +
Sbjct: 173 LERVQQQSGEVSMELADLEAFYRESKTLYDEDEEFAAKARNYVVKLQSGDAFCLEMWKKL 232

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V    +Q      R     +++  D  + E  ++   P     I+ +L  +G   E    
Sbjct: 233 VDVTMIQNQQNYDRL---NVSLSRDNVMGESMYNDMLPG----IVADLKEKGIAQE---- 281

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
                  Q   +D  +        G+ +   + K DG + Y   D+A  K +YE  G D 
Sbjct: 282 ---DDGAQVVFLDEYK-----NKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADR 333

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          +++      + L +DG P K   RAG  + L
Sbjct: 334 VLYFIDSRQHQHLMQAWTIVRKAGYIPEHVSLEHHAFGMMLGKDGRPFK--TRAGGTVRL 391

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           V   +V++  L +  +    FD+  + 
Sbjct: 392 ADLLDEAQVRAAALIEAKNPDLTAEEKTSIATTVAMAAVKYADLSKHRTTDYIFDWDNML 451

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  SIF +A      +  D     +I  E      E  LI  L 
Sbjct: 452 -AFEGNTAPYMQYAYTRVASIFAKAG-----ISMDELTGQIIIGE----EKEKALIAKLL 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   ++      +P+ +  YL++LA  F   +           + A+N +    RL+L 
Sbjct: 502 QFEEAVQAVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVASNEESKQSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  I  GL+++G+ +   M
Sbjct: 556 ALTAKTIKQGLDLLGINTLERM 577


>gi|240948908|ref|ZP_04753264.1| arginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296723|gb|EER47334.1| arginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 575

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 124/616 (20%), Positives = 235/616 (38%), Gaps = 72/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +        VE       ++ +      G    N AM  ++ LG++
Sbjct: 1   MNIQHILSEKIKQAMISAGADSNVEP------LVRQSGKPEFGDYQANGAMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+    +D  VD + IAG GFIN++L+ ++L +  +  + +     +      
Sbjct: 55  PREFAQKILDNANLDGIVDKLEIAGPGFINIFLNKAWLAENANQALQAVNFGIQTA--NP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHASQMELSDLEAFYRA----------AKEHYDSDEAFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + ++H+     +++ R + +     +   +    +   I+   K+K   
Sbjct: 223 YCRTMWKKLVDITMRHNQ----ENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS--TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
             D     +         GD +   + K DG + Y   D+A  K +YE    D  +    
Sbjct: 279 VEDEGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRALVFSD 338

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++DE
Sbjct: 339 SRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLDE 396

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   SV++  L +  +    FD+  +    + N
Sbjct: 397 AVERADKLISARSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGN 455

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R RSIF +A      +D +    N++  E      E  L V L ++   +
Sbjct: 456 TAPYMQYAYTRIRSIFARAG-----IDANNLTGNILLTE----DKERALAVKLLQFEEAL 506

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  YLY+LA  F   +           + A    +   RL+L    A  
Sbjct: 507 NGVAKEGMPHILCQYLYELAGTFSSFYEAC------PILNAE-EAVKNSRLRLAALTAKT 559

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+++  +M
Sbjct: 560 LKQGLDLLGIKTVEKM 575


>gi|254457523|ref|ZP_05070951.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207086315|gb|EDZ63599.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 523

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 167/560 (29%), Positives = 287/560 (51%), Gaps = 44/560 (7%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
           +K    +V+E+P+D   GH +T  A  L++ L   P+ IAE + +         SV  + 
Sbjct: 3   EKFGREVVLEKPKDRTFGHFATPIAFSLAKELRKSPMVIAEDLASSFNESEIFSSVE-SV 61

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KG++N  LS  +L +     + +  E+G+    K +K+ +EFVSANPTGP+H+GH R AV
Sbjct: 62  KGYLNFRLSEDFLNEYGDWALQNQSEFGKQE--KKSKILLEFVSANPTGPLHIGHARGAV 119

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
            GDTL  L    GY++T EYY+ND+G QI+ L LS+    ++ +     + PE YY G Y
Sbjct: 120 YGDTLYKLAKHLGYDITAEYYVNDSGNQIDLLGLSIQLYGRENILKESVEYPESYYRGEY 179

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L+ + K   +K+  E+L+  +E     +  ++   +M I+ + L   NI  D F++E   
Sbjct: 180 LEGLAKGAVEKFGKEILS--DESRQKELALWAKDGVMDIVVNTLADTNIHFDTFVNESSL 237

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      ++ + D + ++                        ++   S   GDD DR ++
Sbjct: 238 YNDWERVMKKMGDGIYKK----------------------DDKVWIASEAKGDDNDRVVV 275

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           + DG  TY A D+ Y   K+ERG+D+ I + G+DH GY+ R+ A    +    +++  LL
Sbjct: 276 REDGRPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIPRVNAAVEYLGYDSSKLETLL 335

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            ++V L +DG P KMSKRAG+ I +  +V+E+GSD++RF+   +K+   L+FD  + K+Q
Sbjct: 336 SQMVSLLKDGEPYKMSKRAGNVILMSDIVEEIGSDALRFIFASKKSDTALEFDLSEFKKQ 395

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              NP+FY+QYA+AR ++I  ++     ++                D +   L+      
Sbjct: 396 DSSNPIFYIQYAHARIQTILSKSNYSREEISASSLKG--------LDENADSLLFDALLL 447

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +IE+A  +++  KL  YL  LA+  H  +   R       +  ++    +  L +V  
Sbjct: 448 PEIIEDAFSSRQVQKLTDYLKALAASLHKFYYDCR------IIGTDDEAKLLKLLLVVAL 501

Query: 566 VASIINSGLNIIGVESPNEM 585
                  GL+++G+++ + M
Sbjct: 502 SLKT---GLSLLGIKAKDRM 518


>gi|47458959|ref|YP_015821.1| arginyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614400|sp|Q6KIG6|SYR_MYCMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|47458287|gb|AAT27610.1| arginyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 536

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 185/589 (31%), Positives = 295/589 (50%), Gaps = 59/589 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           MY+       +K  L++   K+ + +K++             G  S+N AM+L + LG +
Sbjct: 1   MYI---MKLLIKEALEDALLKLNISRKVI------LTDAKDFGDFSSNIAMVLQKDLGKN 51

Query: 61  PLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           PL IA++IV +I K    ++ + I   GFIN +L   +   +L     +        + K
Sbjct: 52  PLEIAQMIVEKINKEKFLIEKIEIVKPGFINFFLDHKFYVYLLEKFSKND---FLIELEK 108

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
               N+E+VSANPTG +H+GH R A +GDTLA+++ F+  +V REYY+NDAG QI+ LA 
Sbjct: 109 TYTYNLEYVSANPTGFLHIGHARGAAIGDTLANILEFANNKVIREYYVNDAGNQISILAY 168

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSV 238
           +++ RYQQ L N   +LPE  Y G  +K+  K    KY  +  N      +    KD  V
Sbjct: 169 ALYIRYQQILGNKTLNLPEDSYHGEDIKYFAKIFHKKYQEKFKNVDYSLEVENFFKDEGV 228

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I+ DLK   ++ D++ SE   +         I  +L +    YE          
Sbjct: 229 KIALEKIKLDLKTFRVEFDLYTSEKSIYPL-------IEKSLKKLKNTYE---------- 271

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVM 356
                     L  ++T  GDD DR L+K+DG+YTYFA DLAY   K  R    D +I   
Sbjct: 272 ------QDGALWLKTTDYGDDKDRVLIKNDGTYTYFAPDLAYHYVKKTRSENVDYLIDFF 325

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH GYVKR++         K  +NVL+ E+V+L ++G    MSKR G  I+L  +++ 
Sbjct: 326 GADHIGYVKRMQIALEQFGFSKDTLNVLILEMVKLRKNGTEFVMSKRKGTAISLEDLIEL 385

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D+ RF ++   +S  LD +   + E++  N  F +QYAYAR  SI  + K       
Sbjct: 386 IGVDNARFFLVDHSSSSKLDLEIDLIAEKNLSNGAFIIQYAYARTNSILEKTK------- 438

Query: 477 FDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                 +V      FD   E++L+  L E+P +IE      + + L+ YL  LA  F+  
Sbjct: 439 ---VTLDVKLIRKPFDDKFEMKLVNVLKEFPILIEKIAENFKIHLLSQYLITLAKSFNSF 495

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +S+ +       +  +  +L +  + LV A  +++  GL+++ VE+P  
Sbjct: 496 YSNSK-------IIDSEEELKL--ILLVKATQAVLKKGLDLLKVEAPER 535


>gi|37679228|ref|NP_933837.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932019|sp|Q7MMM3|SYR_VIBVY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|37197971|dbj|BAC93808.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 577

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 237/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPTGSPAA------VRQSAKPQFGDYQANGVMGVAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +        +   + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADPRLGVASE--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARGYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A     DL  ++            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|293363536|ref|ZP_06610292.1| arginine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552885|gb|EFF41639.1| arginine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 545

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 190/593 (32%), Positives = 301/593 (50%), Gaps = 56/593 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    +  S++   LK I  ++ + K   +  +IE   +      ST+ A I+++   L+
Sbjct: 1   MNKI-ELKSKILEELKLIAKELNLAK---EPFLIEPKTNA---DFSTSMA-IINKTPELN 52

Query: 61  PLTIAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           P+ +A LI  ++     +  ++ V +AG GFINL+L+ +Y+ + ++ I+  G  YG+   
Sbjct: 53  PIALANLIKEKLLTKSNELYLEEVEVAGPGFINLFLNKNYIVQAINDILKKGKNYGKGN- 111

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   +NIE+VSANPTG +HVGH R A +G T+A++  F+G ++TREYYINDAG QI+ L
Sbjct: 112 -KKGSINIEWVSANPTGYLHVGHARNAAIGSTVANICEFAGLKITREYYINDAGNQIDLL 170

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDY 236
           A S+F RYQQ L+N D  +PE  Y G  ++    ++  +Y+ +      E + L + K  
Sbjct: 171 ANSLFSRYQQ-LFNKDYPMPEECYRGEDIQWAADQMFKRYADKFKGIKLEGQVLEVFKKD 229

Query: 237 SVQAMMKIIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            V+  +  I+ DL+    I+ DI+ SE   +  D   I+D +  +               
Sbjct: 230 GVELFLGEIKKDLEKFGGIKFDIWFSEKSLYENDQKIIKDALAKIK-------------- 275

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---M 352
                            +T+ GDD DR L+KSDGS TYF  D+AY   KY R  D    +
Sbjct: 276 -----NTYQKDGATWLNTTLHGDDKDRVLVKSDGSLTYFTPDIAYHNIKYHRNNDKDTVV 330

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + V G+DHSGY+KR++     +      + VL  +LVRL ++G   KMSKR G    LR 
Sbjct: 331 MNVWGADHSGYIKRMKCAMEDIGNNPDNLVVLCMQLVRLVKNGEEYKMSKRRGTSFFLRE 390

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
            VD VG DS RF++L R  +  LDFD    K ++ +NP   VQYA AR  S+ ++     
Sbjct: 391 FVDLVGVDSARFILLDRTYNSKLDFDIDIAKNKTNDNPAILVQYANARAYSLLQKTTYDL 450

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             L+   F  +V            +LI  L E+P +I+ +        L  YL  LA  F
Sbjct: 451 NKLEMKTFNSDVDQ----------KLISTLLEFPEIIDKSADLYMTNILTQYLIKLAKDF 500

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +S+       + +   N +     L LV +  +++ +G+ +IG+   ++M
Sbjct: 501 NSWYSNSD-----KVIGHENEE---SLLALVKSTNTVLETGMKLIGITINHKM 545


>gi|172038489|ref|YP_001804990.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710999|sp|B1X0N5|SYR_CYAA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171699943|gb|ACB52924.1| arginyl-tRNA-synthetase [Cyanothece sp. ATCC 51142]
          Length = 585

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 147/619 (23%), Positives = 252/619 (40%), Gaps = 77/619 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + +L    ++   K   E+       +   RD  HG    N A+ L++ LG +P  IA+
Sbjct: 4   INEQLTQKFQDALVKSFGEEFKDVDPQVNLARDLRHGDYQANIALPLAKKLGKNPREIAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +I+  + ++   ++  I G GFINL L  SYL   L S+  +    G   +    KV ++
Sbjct: 64  IIINNLSLNTICENPTIGGPGFINLKLKSSYLETQLKSLYQNQ-RLGIEKVHNADKVIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD +A  + F GYEV R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYEVLRLNHVGDWGTQFGMLITYLKEVYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYSV 238
            AL   D  L  G     Y +      A K   E   F E     +VK          + 
Sbjct: 183 DALTQADV-LEIGDLVNFYKQ------AKKRFDEDPKFQEAAREAVVKLQSGDEESRKAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q +    R + + +  + D+ + E      +P  + D+I  L  QG +        K + 
Sbjct: 236 QLLCDQSRREFQKIYDRLDVKLIERGESFYNPY-LNDVIKALDEQGIL-------EKDQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
            Q   ++       +   GD +   + KSDG Y Y   DLA  K +  E     +IYV  
Sbjct: 288 AQCVFLEG-----FTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRIQEDKAKRIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  S +  ++  VA   +     ++V       L +     K+  R+G+ + L+ ++DE 
Sbjct: 343 AGQSNHFAQVFQVAKKANFLPDTVDVTHVPFG-LVKGEDGKKLKTRSGETVKLKDLLDEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG  +V++  L +       F + K+    
Sbjct: 402 VNYARKDLENRLQAEDRKESEDFINHVAETVGISAVKYADLSQNRISDYIFSYDKMLAL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAYAR +SI R+      ++D++    N+  Q    + +E++L  +L +  
Sbjct: 461 QGNTAPYMLYAYARIQSISREG-----NIDYENLGENI--QILLKEDTEIELGKYLLQLN 513

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I+    +  P +L  YLY+L+  F+  + +    P L+    ++  +   RL L    
Sbjct: 514 ETIKEVEKSLLPNRLCDYLYELSKKFNRFYENC---PVLK----SDEPVKTSRLLLCDLT 566

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+     M
Sbjct: 567 ARTLKLGLSLLGISVLERM 585


>gi|145297303|ref|YP_001140144.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850075|gb|ABO88396.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 581

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 126/611 (20%), Positives = 234/611 (38%), Gaps = 66/611 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  +  +     +   +  R+ ++R ++ AHG L+TN AM+L++P   +P  +A 
Sbjct: 5   IHHLLEQTVANLKSAGVLPADLEARVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +     +  V IAG GFIN +    +L   + ++V S     +        V ++
Sbjct: 65  AIIENLPASDLIAKVEIAGPGFINFFFDQRWLAGQVETMVTSANANVKLPT--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    M V H R  V+GD  A  + F G++V R  +I D G Q   L   +     
Sbjct: 123 YSAPNVAKEMAVHHIRSTVLGDVAARALEFLGHKVVRANHIGDWGTQFGMLIAYLEKMAN 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +   +      E +Y            A +   E   F E     +VK        + + 
Sbjct: 183 EHASDMALKDLEAFYT----------QAKRCYDEDEAFAERARNYVVKLQGGDEYCRTMW 232

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L  + ++ +      ++ R + S     I   +    +   I+   K+K     + + 
Sbjct: 233 KKLVDMTMEQNQI----NYDRLNVSLTNKDIMGESMYNDMLPEIVADLKAKGLA-VESEG 287

Query: 307 KQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
             ++F        G+ +   + KSDG + Y   D+A  K +YE  G D ++Y + S    
Sbjct: 288 ATVVFLDEFKNKDGEPMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQ 347

Query: 363 YVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           ++ +   +          + +      + L +DG P K   R+G  + L  +++E     
Sbjct: 348 HLMQAWTITRKAGYVPESVPLEHHAFGMMLGKDGRPYK--TRSGGTVKLVDLLNEAEERA 405

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 +   +V++  L +  +    FD+  +    + N   Y+
Sbjct: 406 TALLESRNSDLSAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDWDMMLSF-EGNTAPYL 464

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R +SIFR+A     ++D      NV   E     +E  L   L ++   +     
Sbjct: 465 QYAYTRIQSIFRKA-----NIDASTLIGNVTLNE----EAEEVLAQKLIQFSDAVNGVAD 515

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ L  YLY+L+  F   +     N         +      RL L  A A ++  GL
Sbjct: 516 KGMPHLLCTYLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCTATAKVLKLGL 570

Query: 575 NIIGVESPNEM 585
            ++G+ +   M
Sbjct: 571 GVLGIHTLERM 581


>gi|90408772|ref|ZP_01216917.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310116|gb|EAS38256.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 582

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 253/619 (40%), Gaps = 73/619 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A    +L+  +  +  +  + + I  R+VI+R +D +HG  ++N A++L++P   +P 
Sbjct: 1   MKAFIQQQLEQVIVLLQKQQILPEDIQPRLVIDRTKDKSHGDFASNLALMLAKPAKQNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AELIV  +     +    IAG GFIN +++P+YL K + S   S       L      
Sbjct: 61  ALAELIVKNLPTSDIIIKTEIAGPGFINFFINPNYLEKQIDSAYAS-ERLDVELTEVPQT 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V I++ S N    MHVGH R  ++GD++   + F G  V R+ ++ D G Q   L   + 
Sbjct: 120 VVIDYSSPNLAKEMHVGHLRSTIIGDSVVRALEFQGNNVVRQNHVGDWGTQFGMLLAYME 179

Query: 183 W-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSV 238
             R +      D    E +Y     +    E   + +  L   L    E+ L +  ++  
Sbjct: 180 ELRAEGQEIKKDLANLEVFYRAAKCRFDESEAFAERARHLVVELQNGNEECLVLWTEFKE 239

Query: 239 QAMMKIIRDDLKALNIQHDIFI--SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++    +D  + L +  +      E  ++    + IRD    L  +G + E       S
Sbjct: 240 ISI-SHCQDAYRRLGVSLERKDVRGESAYNDDLSNVIRD----LKEKGLLQE-------S 287

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
           +      +DR +        G+ +   + K DG + Y  +DLA  + +      + ++Y 
Sbjct: 288 QGANVVFLDRFK-----NKEGEPLPVIIQKKDGGFLYATSDLAAIRYRQSVLNANRVLYF 342

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           + +    + +++  VA   S  K    +  +    V +  DG P K   R G    L  +
Sbjct: 343 VDARQGLHFQQVFEVARLASFVKETTPLEHMAFGTV-MGEDGKPFK--TRTGSTPKLADL 399

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           + E                           VG  SV++  L +  +    F+F  +    
Sbjct: 400 LTEAEERAYVLVKEKNQDMPEDELRHIAAVVGIASVKYADLSKNRTSDYVFNFDSMLSF- 458

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAY R  SIF++AK     +D D   +++    S  D  E  L   + ++ 
Sbjct: 459 EGNTAPYLLYAYTRVASIFKKAK-----IDMDSITQDI----SFTDEKEKDLANKIMQFN 509

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +I+  T    P+ L  YL++LA +F   +           + A        RL+L    
Sbjct: 510 EIIKQVTKQGMPHFLCSYLFELAGLFSSFYEAC------PILSAPTEAQKQSRLKLAALT 563

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+ +   M
Sbjct: 564 AKTLKQGLSLLGINTLERM 582


>gi|323499566|ref|ZP_08104536.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315439|gb|EGA68480.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 577

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 125/617 (20%), Positives = 230/617 (37%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +              
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADTRLGV--AEQAQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R QQ       +L +               + K   E   F  +    +VK      
Sbjct: 173 L-ERVQQESGEVSMELAD--------LEAFYRESKKLYDEDEEFAVKARNYVVKLQGGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  RD +   +    +   I+   K K   
Sbjct: 224 YCAEMWKKLVDITMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPPIVADLKEKGIA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
           + D D  Q++F        GD +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 QED-DGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +         ++ +      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEERAIKLIESKNPSLETEEKTKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF +A      L  D+            +  E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVSSIFAKAGISVDQLAGDI---------KVTEEKEKALIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +     +P+ +  YL++LA  F   +           + + +  +   RL+L    A 
Sbjct: 507 VLSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILNSEDESVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+E+   M
Sbjct: 561 TIKQGLSLLGIETLERM 577


>gi|330827801|ref|YP_004390753.1| arginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328802937|gb|AEB48136.1| Arginyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 581

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/611 (20%), Positives = 236/611 (38%), Gaps = 66/611 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  +  +     +   +  R+ ++R ++ AHG L+TN AM+L++P   +P  +A 
Sbjct: 5   IHHLLEQTVANLKSAGVLPADLEARVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +     +  V IAG GFIN +    +L   + ++V S     R  +     V ++
Sbjct: 65  AIIEHLPASDLIAKVEIAGPGFINFFFDQRWLAGQVEAMVTSANANVR--LPAPQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    M V H R  V+GD  A  + F G++V R  +I D G Q   L   +     
Sbjct: 123 YSAPNVAKEMAVHHIRSTVLGDVAARALEFLGHKVIRANHIGDWGTQFGMLIAYLEKMSN 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +   +      E +Y            A +   E   F E     +VK        + + 
Sbjct: 183 EHASDMALKDLEAFYT----------QAKRCYDEDEAFAERARNYVVKLQGGDEYCRTMW 232

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L  + ++ +      ++ R + S     I   +    +   I+   K+K     + + 
Sbjct: 233 KKLVDMTMEQNQI----NYDRLNVSLTNKDIMGESMYNDMLPEIVADLKAKGLA-VESEG 287

Query: 307 KQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
             ++F        G+ +   + KSDG + Y   D+A  K +YE  G D ++Y + S    
Sbjct: 288 ATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQ 347

Query: 363 YVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           ++ +   +          + +      + L +DG P K   R+G  + L  +++E     
Sbjct: 348 HLMQAWTITRKAGYVPESVPLEHHAFGMMLGKDGRPYK--TRSGGTVKLVDLLNEAEERA 405

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 +   +V++  L +  +    FD+  +    + N   Y+
Sbjct: 406 AALLESRNSDLSAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDWDLMLSF-EGNTAPYL 464

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R +SIFR+A     ++D +    NV   E     +E  L   L ++   +     
Sbjct: 465 QYAYTRIQSIFRKA-----NIDAETLTGNVTLNE----EAEEVLAQKLIQFSDAVNGVAD 515

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ L  YLY+L+  F   +     N         +      RL L  A A ++  GL
Sbjct: 516 KGMPHLLCTYLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCAATAKVLKLGL 570

Query: 575 NIIGVESPNEM 585
            ++G+ +   M
Sbjct: 571 GVLGIHTLERM 581


>gi|85059226|ref|YP_454928.1| arginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|109895037|sp|Q2NTK2|SYR_SODGM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|84779746|dbj|BAE74523.1| arginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 576

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 135/617 (21%), Positives = 238/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S +++  L         E +      + +      G    N  M +++ LGL 
Sbjct: 1   MNIHTLLSEKIQQALVAAGAPADCEAQ------VRQSAKAQFGDYQANGVMAIAKQLGLP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +D     V IAG GFIN++L PS+L   L++ + S      ++    
Sbjct: 55  PRKLAENVVGLLNLDGIARKVDIAGPGFINIFLEPSWLANHLAAALSSPRLGIASVA--S 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     ++F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLSFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++     ++++        Y        A ++  E   F E     +VK      
Sbjct: 173 L----EKVQDGGEAEMQLSSLESFYRA------AKQHYDEDPAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       ++R + +  R  +   +    +  GI+   K+K   
Sbjct: 223 YCRQMWRKLVDVTMAQNQ----KTYNRLNVTLTRADVMGESLYNDMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG+Y Y   D+A  K +YE    D +IY +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGAYLYTTTDIACAKYRYETLKADRIIYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++     +          + +      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMLAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTIKLTELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAAKNPSMDAGELARLAQVVGIGAVKYADLSKSRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF+++      L  D+               E QL V L +    
Sbjct: 455 NTAPYMQYAYTRVASIFKRSGQDEQQLTGDI---------RLEAEQETQLAVRLLQLEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ L  YLYDLA +F   + H         + A N  L   RLQL    A 
Sbjct: 506 IATVARDGTPHVLCAYLYDLAVLFSAFYEHC------PILNAENAALRQSRLQLALLTAR 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+E+   M
Sbjct: 560 TLKKGLDLLGIETVERM 576


>gi|323493320|ref|ZP_08098443.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312406|gb|EGA65547.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 577

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 125/617 (20%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ++       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLEGIASKTEIAGPGFINIFLSEEFLAKQADAALADSRLGV--AAEEQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 KTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R QQ       +L +               + K   E   F  +    +VK  S   
Sbjct: 173 L-ERVQQDSGEVSMELAD--------LEAFYRESKKLYDEDEEFAVKARNYVVKLQSGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  RD +   +   ++  GI+   K K   
Sbjct: 224 FCGEMWKKLVDITMIQNQ----RNYDRLNVSLTRDDVMGESMYNHMLPGIVADLKQKELA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D  Q++F        GD +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 VED-DGAQVVFLEEYKNKDGDPMGVIIQKRDGGFLYTTTDIACAKYRYEELGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +         ++++      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPEEVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEERAAKLIESKNPDLAADEKEKISTTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF +A     +L  ++            D  E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVSSIFAKAGISMDNLTGEI---------KVTDEKEKALIAKLLQFDEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA  F   +           +   +  +   RL+L    A 
Sbjct: 507 VQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILNTEDETVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+++   M
Sbjct: 561 TIKQGLSLLGIDTLERM 577


>gi|218245401|ref|YP_002370772.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226701374|sp|B7JVP5|SYR_CYAP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218165879|gb|ACK64616.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 585

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 147/620 (23%), Positives = 251/620 (40%), Gaps = 79/620 (12%)

Query: 7   FSSRLKNY-LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            + +L NY ++ +      E   +D IV+    +   G    N A+ L++ LG  P  IA
Sbjct: 4   INEQLTNYFIQALVKAFGAEFSDIDPIVV-PASNPKFGDYQANIALSLAKKLGEQPRAIA 62

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I+  + ++   +   IAG GFIN+ + P+YL   L  +  +    G        K+ +
Sbjct: 63  QKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQL-KVQQNSSSLGVTKADPIEKIIV 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++GD +A ++   G++V R  ++ D G Q   L   +   Y
Sbjct: 122 DFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLNHVGDWGTQFGMLIAYLAEVY 181

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYS 237
             AL   D+ L  G     Y +      A K   E   F E     +VK         ++
Sbjct: 182 PDALTTADA-LDIGDLVTFYKQ------AKKRFDEDEKFQETARNQVVKLQAGDSQTRHA 234

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            Q + +  R + + +    DI I+E      +P  + DII  L  QG +        K  
Sbjct: 235 WQLLCEQSRREFQVIYDILDINITERGESFYNP-LLEDIIKELDHQGLL-------KKDA 286

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
             Q   +D       +   GD +   + KSDG Y Y   DLA  K +  +   + +IYV 
Sbjct: 287 GAQCVFLDG-----FTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +  + +  ++  VA         + ++      L +     K+  R+G  I LR ++DE
Sbjct: 342 DAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFG-LVKGEDGKKLKTRSGTTIKLRDLLDE 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +  +    F + K+   
Sbjct: 401 AVIYARQDLEKRLAEEGRQESEDFIANVSQVVGISAVKYADLSQNRTSDYIFSYDKMLAL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAYAR +SI R+      ++DF+   +         + +E++L  +L + 
Sbjct: 461 -QGNTAPYMLYAYARIQSISREG-----NIDFESLQQEAKI--ILQEETEIELGKYLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             VIE       P +L  YLY+L+  F+  + +    P L+    +   L   RL L   
Sbjct: 513 SEVIEEVEKTLLPNRLCDYLYELSKKFNRFYENC---PVLK----SEEPLRTSRLLLCDL 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+++G+     M
Sbjct: 566 TARTLKLGLSLLGIPVLERM 585


>gi|257058437|ref|YP_003136325.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588603|gb|ACU99489.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 585

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 147/620 (23%), Positives = 250/620 (40%), Gaps = 79/620 (12%)

Query: 7   FSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            + +L NY  +   K    E   +D IV+    +   G    N A+ L++ LG  P  IA
Sbjct: 4   INEQLTNYFSQALVKAFGAEFSDIDPIVV-PASNPKFGDYQANIALSLAKKLGEQPRAIA 62

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I+  + ++   +   IAG GFIN+ + P+YL   L  +  +    G        K+ +
Sbjct: 63  QKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQL-KVQQNSSSLGVTKADPIEKIIV 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++GD +A ++   G++V R  ++ D G Q   L   +   Y
Sbjct: 122 DFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLNHVGDWGTQFGMLIAYLAEVY 181

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYS 237
             AL   D+ L  G     Y +      A K   E   F E     +VK         ++
Sbjct: 182 PDALTTADA-LDIGDLVTFYKQ------AKKRFDEDEKFQETARNQVVKLQAGDSQTRHA 234

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            Q + +  R + + +    DI I+E      +P  + DI+  L  QG +        K  
Sbjct: 235 WQLLCEQSRREFQVIYDILDINITERGESFYNP-LLEDIVKELDHQGLL-------KKDA 286

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
             Q   +D       +   GD +   + KSDG Y Y   DLA  K +  +   + +IYV 
Sbjct: 287 GAQCVFLDG-----FTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVT 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +  + +  ++  VA         + ++      L +     K+  R+G  I LR ++DE
Sbjct: 342 DAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFG-LVKGEDGKKLKTRSGTTIKLRDLLDE 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +  +    F + K+   
Sbjct: 401 AVIYARQDLEKRLAEEGRQESEDFIANVSQVVGISAVKYADLSQNRTSDYIFSYDKMLAL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAYAR +SI R+      ++DF+   +         + +E++L  +L + 
Sbjct: 461 -QGNTAPYMLYAYARIQSISREG-----NIDFESLQQEAKI--ILQEETEIELGKYLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             VIE       P +L  YLY+L+  F+  + +    P L+    +   L   RL L   
Sbjct: 513 SEVIEEVEKTLLPNRLCDYLYELSKKFNRFYENC---PVLK----SEEPLRTSRLLLCDL 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+++G+     M
Sbjct: 566 TARTLKLGLSLLGIPVLERM 585


>gi|254361175|ref|ZP_04977319.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153092666|gb|EDN73715.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 575

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 237/617 (38%), Gaps = 74/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +        VE       ++ +      G    N AM  ++ LG++
Sbjct: 1   MNIQQILSDKIKQAMVASGADSNVEP------LVRQSGKPEFGDYQANGAMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+    ++   D + IAG GFIN++L+P +L +  +S + +     +      
Sbjct: 55  PREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQAVNFGIKTA--NP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   +AF G  V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHASEMELSDLEAFYRA----------AKEHYDSDEAFAEKARNYVVKLQSGDK 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + + H+     ++++R + +     +   +    +   I+   K+K   
Sbjct: 223 YCLTMWKKLVDITMHHNQ----ENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   ++F        GD +   + K DG + Y   D+A  K +YE    D  +   
Sbjct: 279 VED-DGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++D
Sbjct: 338 DSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   SV++  L +  +    FD+  +    + 
Sbjct: 396 EAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A     ++D +    ++       +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFARA-----NIDENALSGSI----QLNEPKERALAVKLLQFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ L  YLY+LA  F   +           + A        RL+L    A 
Sbjct: 506 LNGVAKEGMPHILCQYLYELAGSFSSFYEAC------PILNAE-ETTKNSRLKLAALTAK 558

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 559 TLKQGLDLLGIKTVEKM 575


>gi|67921649|ref|ZP_00515167.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
 gi|67856761|gb|EAM52002.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
          Length = 585

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 145/619 (23%), Positives = 250/619 (40%), Gaps = 77/619 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + +L    +E       E        +   RD  HG    N A+ L++ LG +P  IA+
Sbjct: 4   INEQLTKKFQEALVTSFGEDFQAIDPQVTTARDLRHGDYQANIALPLAKKLGKNPREIAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I++ + +D   ++  I G GFINL L P+YL   L S+       G   I   T+V ++
Sbjct: 64  TIISNLAVDTICETPTIGGPGFINLKLKPNYLENKLKSLYQEQ-GLGIEKIPDSTQVIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD +A  + F GY+V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYDVLRLNHVGDWGTQFGMLITYLKEVYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--------YSV 238
            AL   D+ L  G     Y +      A K   E   F +     +VK          + 
Sbjct: 183 DALTQADA-LEIGDLVNFYKQ------AKKRFDEDTEFQQRAREAVVKLQSGEQESSQAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +    R + + +  + D+ ++E      +P  + D+I  L  +G +        K + 
Sbjct: 236 ELLCDQSRREFQQIYDRLDVKLTERGESFYNPY-LDDVITALDAEGIL-------KKDQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
            Q   ++       +   GD +   + KSDG Y Y   DLA  + +  E     +IYV  
Sbjct: 288 AQCVFLEG-----FTNKSGDPLPLIVQKSDGGYNYATTDLAALRYRIKEDQAKRIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  S +  ++  VA   +     + V       L +     K+  R+G+ I L+ +++E 
Sbjct: 343 AGQSNHFAQVFQVANKANFLPDTVEVTHVPFG-LVKGEDGKKLKTRSGETIKLKDLLNEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG  +V++  L +  S    F + K+    
Sbjct: 402 INYARKDLENRLQSEERKESEDFINNVAQTVGISAVKYADLSQNRSSDYIFSYDKMLAL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAYAR +SI R+      ++D++    N+  Q    + +E++L  +L +  
Sbjct: 461 QGNTAPYMLYAYARIQSISREG-----NIDYENLGENI--QIILKEDTEMELGKYLLQLS 513

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I+       P +L  YLY+L+  F+  + +    P L+    +       RL L    
Sbjct: 514 ETIKEVEKTLLPNRLCDYLYELSKKFNRFYENC---PVLK----SEEPTKTSRLLLCDLT 566

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL+++G+     M
Sbjct: 567 AKTLKLGLSLLGISVLERM 585


>gi|317179286|dbj|BAJ57074.1| arginyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 541

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 169/572 (29%), Positives = 286/572 (50%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +    VIE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEILEAEAVIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +     +G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVACKGYINFTLSLDFLERSTQKALELKERFGSQAKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV REYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLREYYVNDMGSQIRLLGLSVWLAYREHVLQESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+D+L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKQANNDLEPSLFKENEETIIEVLSSYAKDLMLLEIKDNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L +   +YE                   ++  +S+
Sbjct: 244 HFDSYASEREVFKHK----DAVFERLEKANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++        +    +  +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P++IE++       K+  Y   LAS FH  ++ G+           N  
Sbjct: 456 EKYLLFSALSLPKIIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  +++   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLSNAFKLLGIEIKTKIS 538


>gi|223042112|ref|ZP_03612285.1| arginyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017100|gb|EEF15539.1| arginyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 575

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +        VE       ++ +      G    N AM  ++ LG++
Sbjct: 1   MNIQHILSEKIKQAMISAGADSNVEP------LVRQSGKPEFGDYQANGAMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+    +D  VD + IAG GFIN++L+ ++L +  +  + +     +      
Sbjct: 55  PREFAQKILDNANLDGIVDKLEIAGPGFINIFLNKAWLAENANQALQAVNFGIQTA--NP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHASQMELSDLEAFYRA----------AKEHYDSDEAFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + + H+     +++ R + +     +   +    +   I+   K+K   
Sbjct: 223 YCRTMWKKLVDITMHHNQ----ENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS--TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
             D     +         GD +   + K DG + Y   D+A  K +YE    D  +    
Sbjct: 279 VEDEGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRALVFSD 338

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++DE
Sbjct: 339 SRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLDE 396

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   SV++  L +  +    FD+  +    + N
Sbjct: 397 AVERADKLISARSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGN 455

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R RSIF +A     +L  ++            +  E  L V L ++   +
Sbjct: 456 TAPYMQYAYTRIRSIFARAGIDANELTGEI---------HLTEDKERALAVKLLQFEEAL 506

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  YLY+LA  F   +           + A    +   RL+L    A  
Sbjct: 507 NGVAKEGMPHILCQYLYELAGTFSSFYEAC------PILNAE-EAVKNSRLRLAALTAKT 559

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+++  +M
Sbjct: 560 LKQGLDLLGIKTVEKM 575


>gi|308187218|ref|YP_003931349.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057728|gb|ADO09900.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 576

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 240/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S+++   +         E ++     ++       G    N  M +++ LG  
Sbjct: 1   MNIQALLSAKVSQAMVLAGAPTDCEPQVRQSARVQ------FGDYQANGIMAVAKKLGQA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L  ++L K     +   +      + + 
Sbjct: 55  PRQLAEAVIQHLDLTGIASKVEIAGPGFINIFLDHNWLAKHAREALS--LPRLGVQLAEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHIRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAF 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++    N +++      G Y +      A +   E   F E     +VK      
Sbjct: 173 L----EKQQNENHAEMALADLEGFYRE------AKRTYDEDPEFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +  I    + R + +  R+ +   +    +  GI+   K K   
Sbjct: 223 YCRQMWKKLVDITMSQNQKI----YDRMNVTLTRNDVMGESLYNDMLPGIVADLKQKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   +++        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVYLDEFQNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLKADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          + +      + L +DG P K   R+G  I L  ++D
Sbjct: 338 DSRQHQHLVQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGRPFK--TRSGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           +G  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAWQRAYTLVREKNPEMSEAEVKALAEVMGISAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A      +D D     ++  E      E QL   L ++  V
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAG-----IDADSLDAEIVISE----EREAQLATRLLQFEEV 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A +    + RLQL    A 
Sbjct: 506 ITQVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILSAESDATRLSRLQLAALTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++   M
Sbjct: 560 TLKQGLDTLGIDTVERM 576


>gi|301156166|emb|CBW15637.1| arginyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 577

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/618 (19%), Positives = 232/618 (37%), Gaps = 74/618 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S L + +K+       +++     +I +      G    N  M  ++ LGL+
Sbjct: 1   MNI----QSILSDKIKQAMIAAGADEQC--DALIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++    +    +   IAG GFIN++L+P++L   +S+ +    +       + 
Sbjct: 55  PREFAQKVLDHADLSDIAEKTEIAGPGFINIFLNPTWLANNVSAALKD--QNLGVSANEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E  +F E+    +VK      
Sbjct: 173 LEKMENEHASEMELQDLEAFYRE----------AKKHYDEDESFAEKARNYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKKLVDITMQQNQ----RNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
               D   L+          G+ +   + K DG + Y   D+A  K +YE    D  +  
Sbjct: 279 V--EDEGALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  S ++++   +           ++      + L +DG P K   R G  + L  ++
Sbjct: 337 SDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  SV++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATVLINEKNTNLSDEEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A      L       +        D  E  L + L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFNKANVNPTALAEAKIQLS--------DEKERALAIKLLQFEE 505

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++       P+ L  YLY+LA  F   + H         + A +  + + RL+L     
Sbjct: 506 AVQTVGKEGTPHVLCAYLYELAGAFSSFYEHC------PILNAEDENVKLSRLKLASLTE 559

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 560 KTLKQGLALLGIKTIEKM 577


>gi|330001087|ref|ZP_08303897.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328537789|gb|EGF63987.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 561

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 131/592 (22%), Positives = 237/592 (40%), Gaps = 76/592 (12%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
              + +      G    N  M +++ LG+ P  +AE +++ + ++   + V IAG GFIN
Sbjct: 9   EPQVRQSAKVQFGDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFIN 68

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L P++L   ++  + S  E       +   + +++ + N    MHVGH R  ++GD  
Sbjct: 69  IFLDPAFLADNVNRALQS--ERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDAS 126

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              + F G++V R  ++ D G Q   L   +  + Q+          EG+Y         
Sbjct: 127 VRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQENAGEMALADLEGFYRE------- 179

Query: 211 KELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              A K+  E   F E     +VK     +Y +Q   K++   +    I +D        
Sbjct: 180 ---AKKHYDEDEAFAERARSYVVKLQGGDEYFLQMWRKLVDITMSQNQITYD-------- 228

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDR 322
            R + +  RD +   +    +  GI+   K+K     + +   ++F        G+ +  
Sbjct: 229 -RLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA-VESEGATVVFLDEYKNKEGEPMGV 286

Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            + K DG Y Y   D+A  K +YE    D ++Y + S    ++ +   +          +
Sbjct: 287 IIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSV 346

Query: 382 NVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
            +      + L +DG P K   RAG  + L  ++DE                        
Sbjct: 347 PLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENL 404

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     
Sbjct: 405 AKVVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---I 460

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D +  +    VI      +  E QL   L ++   +        P+ +  YLYDLA +F 
Sbjct: 461 DENAMIDAPVVIA-----EDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFS 515

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           G + H         + A + +    RL+L    A  +  GL+ +G+E+   M
Sbjct: 516 GFYEHC------PILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 561


>gi|229845606|ref|ZP_04465732.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811473|gb|EEP47176.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 577

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 239/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             +++   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRMMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  I L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTIKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A N  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAENESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|114045966|ref|YP_736516.1| arginyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123131795|sp|Q0HZJ6|SYR_SHESR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113887408|gb|ABI41459.1| arginyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 581

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 128/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  S L   L + +       +        + ++
Sbjct: 65  LIIDNLPASAYVAKVEIAGPGFINFFIDDSALANQLQAAISDEHLGIKLPT--PQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 QNGEQAQLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +  + L +         E  ++    + +  ++ +L  QG + +       S   
Sbjct: 242 LSHCHEVYERLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTQ-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y   DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEE----FR-NKEGEALPVIIQKADGGYLYATTDLAAMRYRSSVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R G  + L  ++DE 
Sbjct: 346 RQALHFQQVFSLAKLAKFVRNDMSLEHLGFGTMNGEDGRPFK--TRTGGVVKLVDLLDEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NTRALELVRSKNPDMDEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDIDLSQAKIVLE----HEKEKDLGNKLAQFGEILS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    A+ +
Sbjct: 513 RVVDKGQPHVLCGYLYELAGAFSSFYEAC------PVLAADNDEQKHSRLLLSQLTANTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|110835103|ref|YP_693962.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123149267|sp|Q0VMA8|SYR_ALCBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110648214|emb|CAL17690.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 584

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 132/620 (21%), Positives = 248/620 (40%), Gaps = 85/620 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           S +++ L  +     +       + I+R RD +HG  +TN A++L++P G+ P  +AE +
Sbjct: 7   SLIESALDTLITDGTLPADAKRPVQIDRTRDKSHGDFATNIALMLAKPAGMKPRDLAEKL 66

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           +A +  D  V  V IAG GFIN + +  +L  +L S +      G +   +   V +++ 
Sbjct: 67  IAALPNDSAVAKVDIAGPGFINFFQADDWLTGLLDSALADD-FLGISRPEQPQTVVVDYS 125

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R  ++GD +   + F G+ V R+ ++ D G Q   L   + +  +Q 
Sbjct: 126 SPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHTVIRQNHVGDWGTQFGML---LAYLEEQK 182

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMK 243
               + +L                 A +   E  +F +     +VK     DY +    +
Sbjct: 183 TEEGERELSRELAN----LETFYRAAKQRFDESDSFADRARALVVKLQSGDDYCLTLWAE 238

Query: 244 IIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +  L      +D             E  ++      +  ++ +L  +G + E      
Sbjct: 239 FNQVSLSHCQAIYDRLGVSLTPADVHGESAYN----DDLAQVVADLDSKGLLSE------ 288

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            S+  Q   MD  +        G+ +   + K+DG Y Y  +DLA  + +      D M+
Sbjct: 289 -SQGAQCVFMDAFK-----NKEGEPLPVIVRKADGGYLYATSDLAALRYRASTLRADRML 342

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRH 412
           Y +    + + +++  +A        Q  +       +   DG P K   R G  + L  
Sbjct: 343 YFVDQRQALHFQQMFTLAKLAGFVPEQTELAHMGFGTMNGPDGRPFK--TRDGGTVKLVD 400

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++DE                           VG  +V++  L +  S    F+F ++   
Sbjct: 401 LLDEAEQRAFALVQEKNPQLDDEELRNIARSVGIGAVKYADLSKNRSSDYIFNFEQMLSF 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAY R  S+FR+A+    ++  D             + +E  L   L ++
Sbjct: 461 -EGNTAPYLLYAYTRVASVFRKAELDMANVSGDFL---------LNEDAEHTLAARLVQF 510

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V++N     +P+ L+ YLYD+A +F   + H         + + + ++   RL+L   
Sbjct: 511 GEVLQNVADKGQPHLLSAYLYDVAGLFSSFYEHC------PILSSEDERIRQSRLKLAAL 564

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  G+ ++G+     M
Sbjct: 565 TARTLKHGMELLGLSPLERM 584


>gi|319897254|ref|YP_004135449.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432758|emb|CBY81123.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 577

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERSTVLINEKNTNLSNDEKEAVIKAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|166365931|ref|YP_001658204.1| arginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083539|sp|B0JLI8|SYR_MICAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166088304|dbj|BAG03012.1| arginyl-tRNA-synthetase [Microcystis aeruginosa NIES-843]
          Length = 585

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 143/620 (23%), Positives = 238/620 (38%), Gaps = 79/620 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++K    +   K   E       +I    +   G    N ++ L++ L   P  +A 
Sbjct: 4   IIQQIKERFSQSLVKSFGENFADTDPLIVAASNPRFGDYQCNISLSLAKELKQKPREVAA 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  ++ID    +  IAG GFINL L PSYL   L  ++      G        K+ ++
Sbjct: 64  TLLKNLEIDDLCQTPEIAGPGFINLTLKPSYLETQLKDLITDN-RLGVATANPSQKIIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD +A ++ F  ++V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYSV 238
            AL   D+ L  G     Y K      A     E  NF E     +VK          + 
Sbjct: 183 SALTQADA-LDLGDLVSFYKK------AKIRFDEDENFKETARQAVVKLQSGDPQSRQAW 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q + +  R + + +    DI ++E      +P  +  +I  L +QG + E          
Sbjct: 236 QLLCQQSRREFQKIYDILDIKLTERGESFYNPY-LEAVIRELDQQGLLTE-------DNG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
                +D       +   G+ +   + KSDG Y Y   DLA    +  E   + +IYV  
Sbjct: 288 ALCVFLDG-----FTNKEGEPLPLIVKKSDGGYNYATTDLAAICYRVREDKAERIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +  + +  ++  VA         + V+     + L  DG   K+  R+G+ + L+ ++D+
Sbjct: 343 AGQANHFAQVFQVAKKAGFLPDNVAVVHVAFGLVLGEDGK--KLKTRSGETVKLQELLDQ 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +       F + K+   
Sbjct: 401 AIACSLADLEKRLASEEREETGDFIAKTAETVGLSAVKYADLSQNRHSNYVFSYDKMLNL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAYAR +SI R+    F DL  +             D SEL L   L + 
Sbjct: 461 -QGNTAPYMLYAYARVQSISREGGINFQDLSAN-------SSLILKDESELILAKQLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P VI        P +L  YLY+L+  ++  + +    P L+        +   RL L   
Sbjct: 513 PEVISAVEEDLLPNRLCDYLYELSKKYNRFYENC---PVLKAA----EPIKTSRLFLCDL 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+++G+     M
Sbjct: 566 TARTLKLGLSLLGIPVLERM 585


>gi|117922106|ref|YP_871298.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166232843|sp|A0L1H3|SYR_SHESA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|117614438|gb|ABK49892.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 581

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 128/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  S L   L + +       +        + ++
Sbjct: 65  LIIDNLPASNYVAKVEIAGPGFINFFIDDSALANQLQAAISDEHLGIKLPT--PQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 QNGEQAQLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +  + L +         E  ++    + +  ++ +L  QG + +       S   
Sbjct: 242 LSHCHEVYERLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTQ-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y   DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEE----FR-NKEGEALPVIIQKADGGYLYATTDLAAMRYRSSVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R G  + L  ++DE 
Sbjct: 346 RQALHFQQVFSLAKLAKFVRNDMSLEHLGFGTMNGEDGRPFK--TRTGGVVKLVDLLDEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NTRALELVRSKNPDMDEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDIDLSQAKIVLE----HEKEKDLGNKLAQFGEILS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    A+ +
Sbjct: 513 RVVDKGQPHVLCGYLYELAGAFSSFYEAC------PVLAADNDEQKHSRLLLSQLTANTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|145632971|ref|ZP_01788704.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986627|gb|EDJ93193.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|309973254|gb|ADO96455.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 577

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  I L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTIKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A N  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAENESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|171920791|ref|ZP_02931487.2| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179047|ref|ZP_02964791.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024320|ref|ZP_02997001.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518655|ref|ZP_03004094.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524461|ref|ZP_03004470.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273663|ref|ZP_03206198.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554068|ref|YP_002284679.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225551313|ref|ZP_03772259.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903551|gb|EDT49840.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209032|gb|EDU06075.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018999|gb|EDU57039.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997759|gb|EDU66856.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659663|gb|EDX53043.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249691|gb|EDY74472.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541569|gb|ACI59798.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379128|gb|EEH01493.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 548

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 169/594 (28%), Positives = 296/594 (49%), Gaps = 56/594 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S +L   L+++            ++++++ ++   G   TN AM LS+ +   
Sbjct: 1   MMITQKISEQLSKALEKMGI-------FETKVLVDKTKNIKFGDFYTNVAMTLSKRVNQS 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL +A+ I+  +  D     V +   GF+N  L       +L+ I      +G     K 
Sbjct: 54  PLVVAKEIINNLDQD-LFFKVNLQPPGFLNFTLKAKDHEDLLTQIYDQKDLFG-QFAKKN 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
              N+E+VSANPTG +H+ H   A+ GD LA+L+   GY+V  EY+INDAG QI+ LA+S
Sbjct: 112 ITYNVEYVSANPTGYLHIAHAANAIYGDILANLLKIYGYDVKTEYWINDAGNQIDKLAMS 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------- 232
           V  RY Q L N + +LP   Y G  +  V + L + Y  + +N    +   I        
Sbjct: 172 VLVRYLQ-LQNINIELPTDAYHGQEIYLVAQALYEIYKDQFINVRLNEKEEIDDVIVNEQ 230

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +K ++V  ++  I+ DL ++N   D + SE+         I +++  + +  Y  +G   
Sbjct: 231 IKKFAVSYLLDEIKKDLASINTYIDTYTSENWI--RSSGRILEVLSKIKQHTYTLDG--- 285

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                           L  R+T  GDD DR L+KSDGSYTYF  D+AY   K+ +     
Sbjct: 286 ---------------ALWLRTTAFGDDKDRVLIKSDGSYTYFTPDIAYHDYKFSKDNTTK 330

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I V G+DH GY+ RL+A  +A+      + ++  ++++L ++    K+SKR+G  +T++
Sbjct: 331 LIDVWGTDHLGYIARLKAAMSALGYDPNNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIK 390

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +V+ +G D++R+ +     +  +  D      ++  NP++YVQYA+AR   +  +    
Sbjct: 391 DLVEIIGKDALRWFLGSSSMNSHVVIDVDIALSKNNNNPLYYVQYAHARANQVLNK---Q 447

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             + DF          +   +T E +L+  L  Y + I NA   +EP++++ YLYDLA +
Sbjct: 448 VYEFDF--------KTDLLIETRERELLNQLHFYKQTIANAANNREPHRISNYLYDLAQI 499

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH ++++      ++    NN+ L+  R  LV  V  ++ +GL I+ +   ++M
Sbjct: 500 FHNYYAN------IKINDENNKALSAQRYTLVWCVKQVLANGLAIMKITPYDQM 547


>gi|284007623|emb|CBA73252.1| arginyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 576

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 231/617 (37%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++ N L                  I        G    N  M  ++ +G+ 
Sbjct: 1   MNIQALLSEKISNALVAAGAPKG------SDAHIRPSTKAQFGDYQANGVMSAAKKIGIP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  +K++     V IAG GFIN++L   ++ K +   +    E         
Sbjct: 55  PRQLAEKMLPLLKLENIASKVEIAGPGFINIFLDKQWIAKQIELTLQH--EKLAINSVTP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD +A  + F G++V R  +I D G Q   L   
Sbjct: 113 QTIIIDYSAPNVAKQMHVGHLRSTIIGDAVARTLEFLGHKVIRANHIGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    Q+   N      E +Y            A K+  E  NF E     +VK  S   
Sbjct: 173 LEKVQQENATNMALADLETFYRE----------AKKHYDEDENFAELARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +   D +   +    +   I+    +K   
Sbjct: 223 YCRKMWHKLVDITMAQNQ----QTYQRLNVTLTEDDVMGESLYNNMLPDIVADLTAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
             + D   +++        GD +   + K DG Y Y   D+A  K ++E    D ++Y  
Sbjct: 279 -VESDGAMVVYLDEFKNKDGDAMGVIIQKKDGGYLYTTTDIACAKYRHEILHADRVLYYT 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYIPDTMSLEHHMFGMMLGKDGKPFK--TRAGGTIRLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERAAHLIRQKNSAMPEKELQSIIQAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++AK         + P  +       +  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRVASIFKRAK---------INPATLTAPVILANEYEQVLAIRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F   + H         + A N      RL+L      
Sbjct: 506 ILTVAREGLPHIMCSYLYDLAGLFSSFYEHC------PILNAENDASKQSRLKLALLTQK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+E+   M
Sbjct: 560 TLKIGLDTLGIETVERM 576


>gi|167855456|ref|ZP_02478221.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755]
 gi|167853450|gb|EDS24699.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755]
          Length = 575

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 246/617 (39%), Gaps = 74/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +     +  VE       ++ +      G    N  M  ++ LGL+
Sbjct: 1   MNIQHILSEKIKQAMIVAGAEQNVEP------LVRQSGKVQFGDYQANGIMGAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ +V  + ++   + + IAG GFIN++L+P++L +  +    SG + G N + + 
Sbjct: 55  PREFAQKVVDNVDLNGIAEKLEIAGPGFINIFLAPTWLAQQ-TENAFSGDKLGIN-LNQA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++  ++ F G +V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRVLEFLGNKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHASEMELSDLEAFYR----------TAKEHYDSDEVFAEKARNYVVKLQSGDD 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +   + +   +    +   I+   K++   
Sbjct: 223 YCRTMWKKLVNITMQQNQH----NYNRLNVTLTENDVMGESLYNPMLPEIVADLKAQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   ++F        GD +   + K DG + Y   D+A  K ++E    D  +   
Sbjct: 279 VED-DGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRFETLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHHNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAEKLIAEKNPDLTACEKQAVVEAVAIGAVKYSDLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A      +D +    N++      D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRVRSIFSRAG-----IDPNSLTANIV----LIDEKERNLAIKLLQFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ L  YLY+LA +F   +           + A    +   RL+L H  A 
Sbjct: 506 VTVVAKDGTPHVLCQYLYELAGIFSSFYEAC------PILNAE-ESIKQSRLKLAHLTAK 558

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 559 TLKQGLDLLGIKTVEKM 575


>gi|255323529|ref|ZP_05364660.1| arginyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255299566|gb|EET78852.1| arginyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 528

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 156/563 (27%), Positives = 280/563 (49%), Gaps = 42/563 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           +++  +     +E+P+D    H +   A  L++ L   P+ IA  + ++ +     ++  
Sbjct: 8   EIKGAVDFDFALEKPKDKGLAHYAM-PAFSLAKQLKKSPVAIAAELASKFENSEVFEA-- 64

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            A  G+IN  L P++L K  S+ + +  E+ +     G K+ +E+VSANPTGP+H+GH R
Sbjct: 65  TALNGYINFKLKPAFLDKFASASLANPSEFAKGGATSGEKILLEYVSANPTGPLHIGHVR 124

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            AV GDTLA +    G  +  EYYINDAG QI  L  S+    ++ L+      PE +Y 
Sbjct: 125 GAVFGDTLARVGLHIGENIATEYYINDAGNQIELLGTSISLWARENLFGQSVAYPEKFYR 184

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y++ + KE  +K+  E+  F +E     + ++    ++ +I+ +L    I  + + SE
Sbjct: 185 GDYIEPIAKEALEKFGKEI--FYDESRNLELAEFGKDRVLVLIKQNLADAQIFIENWASE 242

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++      +   ++ L  +  +YE                   ++  +S+ VGD+ DR
Sbjct: 243 KSYY----DKLPLTLERLKSENGIYES----------------EGKIWLKSSEVGDEKDR 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            +++ DG  TY A D+ Y   K+ RGFD  I + G+DH GY+ R++A    +   + ++ 
Sbjct: 283 VIVREDGRGTYLAGDVVYHDDKFRRGFDRCINIWGADHHGYIARMKAALHLLGYDENRLE 342

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           ++L ++V L +DG   KMSKRAG+ + +  VV+E+G +++RF+ L ++    L+FD  ++
Sbjct: 343 IILSQMVSLLKDGEAYKMSKRAGNVVLMSDVVEEIGYEALRFIFLSKRCDTHLEFDVDEL 402

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K +   NP+FY+ YA+AR   IF +A     D+    F                 L+   
Sbjct: 403 KREDSSNPIFYINYAHARINQIFAKAGKSVVDVAGVKFEN--------LSEDGKNLLFEA 454

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                ++ ++   +   K+  YL  LA+ FH  ++  R          N  +L    L+L
Sbjct: 455 LTLNDILVDSFNTRAVNKICDYLKSLAANFHKFYNENRV-----VGSENEDEL----LKL 505

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              VA  I + L ++G+ + ++M
Sbjct: 506 FAVVALSIKTALGLMGIAAKDKM 528


>gi|57505428|ref|ZP_00371356.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016253|gb|EAL53039.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 530

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 165/555 (29%), Positives = 267/555 (48%), Gaps = 42/555 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
             ++E P+D A  H +T  A  L++     P  IA  +  + +     + V  A  G++N
Sbjct: 16  DFILENPKDKALAHFATPLAFSLAKEFKKAPALIAADLALKFEDHFYFEKVE-AVNGYLN 74

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             LS ++L  +    +    E+G+    K     +E+VSANPTGP+H+GH R A+ GDTL
Sbjct: 75  FRLSKAFLDFLAKKALKQPDEFGKGKA-KNESFLLEYVSANPTGPLHIGHARGAIFGDTL 133

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A +    GY+   EYY+NDAG QI+ L LSV  + +    N + + PE  Y G Y+  + 
Sbjct: 134 ARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILYLNEELEYPENAYKGEYIDDLA 193

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E    +  +         L      +   M+ +I+ +L   NI  D ++SE  ++    
Sbjct: 194 CEAFANFEKDFFTMDNVSNLAFW---AKDKMLDLIKQNLAQANIIIDHYVSERSYYN--- 247

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             + D I +L   G VYE                   ++   S++ GD+ DR +++ DG 
Sbjct: 248 -TLEDTIRSLKAHGGVYE----------------RDYKIWLASSLKGDEKDRVIVRDDGR 290

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY AAD+ Y K K  RG+D  I + G+DH GY+ R++A    +      + ++L ++V 
Sbjct: 291 GTYLAADIVYHKDKMGRGYDKCINIWGADHHGYIPRMKAAIEFLGFNPQNLEIILAQMVS 350

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L +D  P KMSKRAG+FI +  ++DE+GSD++RF+ L +K    L+FD   +K++   NP
Sbjct: 351 LLKDNQPYKMSKRAGNFILMSEILDEIGSDALRFIFLSKKCDTHLEFDIDILKKEDNSNP 410

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +FY+ YA+AR + IF +A     D+        V    S  +     L+        V+ 
Sbjct: 411 IFYINYAHARVKQIFLKAGKSLDDV--------VEADLSNLNDEATNLLFEALNLGSVLN 462

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A   +   K+  YL  LA+ FH  +   R       +   N       L+L   VA  I
Sbjct: 463 DAFEQRALQKIPDYLKGLATSFHKFYYENR------VIGTENED---SLLKLFALVALSI 513

Query: 571 NSGLNIIGVESPNEM 585
             G  ++G+   ++M
Sbjct: 514 KIGFALMGIRVKDKM 528


>gi|311273964|ref|XP_003134121.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Sus scrofa]
          Length = 660

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 134/607 (22%), Positives = 255/607 (42%), Gaps = 73/607 (12%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLDPLTIAELIVARIK 73
             K          +++   +    G    N+AM +S     +   ++P  IAE I   + 
Sbjct: 87  AIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVNPREIAENITKNLP 146

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
            +  ++ V IAG GFIN++L  S++ + L++++V+G++     IG   KV ++F S N  
Sbjct: 147 DNEYIEKVEIAGPGFINIHLKKSFVSQQLTNLLVNGVQLP--AIGANKKVIVDFSSPNIA 204

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL--YN 191
             MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   +  ++   L    
Sbjct: 205 KEMHVGHLRSTIIGESMSRLFEFAGYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLRVSP 264

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              DL + +Y     +   +E   K + + +   + K   I+K  + + +  + R +   
Sbjct: 265 PIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDILK--AWKLICDVSRQEFSK 321

Query: 252 LNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +    DI + E    F++     + DI+     +G+V                  D +++
Sbjct: 322 IYEALDISLIERGESFYQ---DRMNDIVKEFEDRGFVQVD---------------DGRKI 363

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLE 368
           +F   + G  V   ++KSDG YTY  +DLA  K + +E   D +IYV+ S  S + + + 
Sbjct: 364 VF---VPGCPVPLTIVKSDGGYTYDTSDLATIKQRLFEEKADMIIYVVDSGQSLHFQAVF 420

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
             A  +     ++  +      +       K   R+G+ + L  +++E            
Sbjct: 421 GAAQMMGWYDPEVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEK 480

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            V    +++  L         F F K+ +  + N   Y+ YA+ 
Sbjct: 481 ERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFT 539

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518
           R RSI R A     ++D ++  +     +   D   E +L   +  +P V++        
Sbjct: 540 RIRSIARLA-----NIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEVLQKILDDLFL 594

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + L  Y+Y+LA+ F   +       + R       K+ M RL L  AVA+++  G +I+G
Sbjct: 595 HTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGEVLKVNMWRLLLCKAVAAVMAKGFDILG 653

Query: 579 VESPNEM 585
           ++    M
Sbjct: 654 IKPVQRM 660


>gi|148978252|ref|ZP_01814770.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962553|gb|EDK27830.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 577

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKRLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D     V IAG GF+N++L  ++L K   + +            + 
Sbjct: 55  PREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDEAFLAKQADAALADSRLGV--AAAEA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +    + +  +      G Y +      + K   E   F  +    +VK  S   
Sbjct: 173 L---ERVQAESGEVSMELADLEGFYRE------SKKLYDEDEEFAVKARGYVVKLQSGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  RD +   +   ++  GI+   K +   
Sbjct: 224 FCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNHMLPGIVADLKEQGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
           K D D  Q++F        GD +   + K DG + Y   D+A  K ++E  G D ++Y +
Sbjct: 280 KED-DGAQVVFLDEYKNKDGDPMGVIIQKRDGGFLYTTTDIACAKYRFEELGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYIPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F +A      L+ ++            +  E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVASVFAKAGVSMDSLEGEI---------KITEEKEKALIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    A 
Sbjct: 507 VQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILIAEDEAVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+E+   M
Sbjct: 561 TIKQGLSLLGIETLERM 577


>gi|113971826|ref|YP_735619.1| arginyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130050|sp|Q0HEF5|SYR_SHESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113886510|gb|ABI40562.1| arginyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 581

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 128/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  S L   L + +       +        + ++
Sbjct: 65  LIIDNLPASAYVAKVEIAGPGFINFFIDDSALANQLQAAISDEHLGIKLPT--PQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 QNGEQAQLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +  + L +         E  ++    + +  ++ +L  QG + +       S   
Sbjct: 242 LSHCHEVYERLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTQ-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y   DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEE----FR-NKEGEALPVIIQKADGGYLYATTDLAAMRYRSSVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R G  + L  ++DE 
Sbjct: 346 RQALHFQQVFSLAKLAKFVRNDMSLEHLGFGTMNGEDGRPFK--TRTGGVVKLVDLLDEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NTRALELVRSKNPDMDEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDIDLSQAKIVLE----HEKEKDLGNKLAQFGEILS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    A+ +
Sbjct: 513 RVIDKGQPHVLCGYLYELAGAFSSFYEAC------PVLAADNDEQKHSRLLLSQLTANTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|26554064|ref|NP_757998.1| arginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747673|sp|Q8EVF2|SYR_MYCPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|26454072|dbj|BAC44402.1| arginyl tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 564

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 171/593 (28%), Positives = 291/593 (49%), Gaps = 53/593 (8%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     +K+ +K+   KI ++   L+  V+++ +    G   +N AMIL+  L  +P+
Sbjct: 6   IIASIKDLIKDAVKD-KFKITID---LNDFVVDKAKSIEFGDFYSNVAMILASKLKKNPI 61

Query: 63  TIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IAE I   +K       +S      G+IN++LS S    +   I      YG     K 
Sbjct: 62  LIAEEICEYLKNHKTNLFESTEAVKPGYINVFLSNSVKSDLFKQINKDKDTYGIFEP-KK 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
              NIEFVSANPTG +H+GH R A +G TL ++    GY + +EYYIND G QIN L +S
Sbjct: 121 VAYNIEFVSANPTGSLHIGHARNAALGQTLGNVWKAYGYTIEQEYYINDGGNQINNLGMS 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIV 233
           VF+RY Q     D  + E +Y G     V + +  ++  + +N         +EK     
Sbjct: 181 VFYRYLQKC-GKDVQMEEDFYQGSEPIAVAELIYKEHKDKFVNVKYSATKIEDEKVFDFF 239

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +D+S   +M II+ DLK  ++  D +  E   +  +   +   I  L +  YVYE     
Sbjct: 240 RDFSKTELMNIIKKDLKDFSVHFDRYFPESKIY--EMKLVDPTIKKLGK--YVYE----- 290

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-----G 348
                          L  ++T  GDD DR ++KSD S+TYF  D+AY   K  R      
Sbjct: 291 -----------KDGALWLKTTEFGDDKDRVIVKSDKSFTYFMPDIAYHDIKATRTINGLK 339

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +  + G+DH+ YV R+      +  KK  ++V++ ++V+L ++G   KMSKR+G+ +
Sbjct: 340 TDKIFNIWGADHASYVDRMTVALQCLGFKKDIMHVIVMQMVKLTKNGKEFKMSKRSGNSL 399

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           TLR +++ +G D+ R+ ++ +     ++ D  K       + + YV YAY+R + I  + 
Sbjct: 400 TLRDLINAIGVDNSRWELISQAAESHIEIDVEKFTSADSTSNLSYVLYAYSRIQKILEKN 459

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           + +  +             +   +  E  +I  L  YP+ I N   + E +K+  +LY L
Sbjct: 460 ESLLKE-------SKSYNTDLLTNLKEKDMIAMLFYYPQTIANIAKSYEVHKIPIFLYTL 512

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A++ H ++S       ++ +  +N++L + RL L+  V  +I +GL ++ +E+
Sbjct: 513 ANLLHSYYS------EVKIIDESNKELLIQRLHLLQCVNQVIKNGLKLLDIEA 559


>gi|119943800|ref|YP_941480.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166232827|sp|A1SQW6|SYR_PSYIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119862404|gb|ABM01881.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 582

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 127/615 (20%), Positives = 246/615 (40%), Gaps = 73/615 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  +  +  +  +   I  RI I+R +D +HG  + N A++L++P   +P  +AE
Sbjct: 5   IQQLLEQAIVCLIKQEIIPADIQPRINIDRTKDKSHGDYANNLALMLAKPAKQNPRHLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+A I     V  + IAG GFIN +++P++L K +    +        +      + I+
Sbjct: 65  LIIANIPESTLVIKMEIAGPGFINFFINPNFLEKQIDGAYLDK-RLNVQIEANPQTIVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW--R 184
           + S N    MHVGH R +++GD +A  + F G  V R+ ++ D G Q   L   +     
Sbjct: 124 YSSPNLAKEMHVGHLRSSIIGDAVARTLEFKGNNVVRQNHVGDWGTQFGMLLAYMEELRA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMM 242
             + + NN ++L   Y          ++ A +    ++      +  L +   ++  + +
Sbjct: 184 KGEPIENNLANLEIFYRAAKGRFDESEDFATRARHLVVKLQGGNKDCLKLWAKFNETS-L 242

Query: 243 KIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              ++  + L +         E  ++      +  ++++L +QG + +       S+  +
Sbjct: 243 SHCQETYQRLGVSLTRADVRGESSYN----DQLAVVVEDLDKQGLLQQ-------SQGAK 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
              +D  +        GD +   + K DG + Y  +DLA  + +  E   D ++Y + + 
Sbjct: 292 CVFLDNFK-----NKEGDPLPVIIQKKDGGFLYATSDLAAMRYRQNELNADRILYFVDAR 346

Query: 360 HSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
              + +++  VA +     +K  +  +    V +  DG P K   R+G    L  ++ E 
Sbjct: 347 QGLHFQQVFEVARSAGFVNEKTSLEHMPFGTV-MGEDGRPFK--TRSGAVAKLADLLTEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F  +    + N 
Sbjct: 404 EVRAYELVKEKNKEMSEPELRHIASVVGISSVKYADLSKNRTSDYTFSFDSMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R  SIF +A              +V    S     E+ L   L ++  +I+
Sbjct: 463 APYLLYAYTRVVSIFNKAGIEM---------GSVTAAVSLTQEKEIDLANKLIQFNDIID 513

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P+ L  YL++LA +F   +           + A        RL+L    A  +
Sbjct: 514 QVAKQGMPHFLCSYLFELAGLFSSFYEAC------PILIAETETQKQSRLKLAGLTAKTL 567

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+ +   M
Sbjct: 568 KQGLSLLGINTLERM 582


>gi|195867603|ref|ZP_03079605.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660660|gb|EDX53915.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 547

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 167/588 (28%), Positives = 296/588 (50%), Gaps = 52/588 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + ++   L +   K+ + +    ++++++ ++   G   TN AM LS+ +   PL +A+
Sbjct: 2   ITQKISEQLSKALEKMGIFE---TKVLVDKTKNIKFGDFYTNVAMTLSKRVNQSPLVVAK 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +  D     V +   GF+N  L       +L+ I      +G     K    N+E
Sbjct: 59  EIINNLDQD-LFFKVNLQPPGFLNFTLKAKDHEDLLTQIYDQKDLFG-QFAKKNITYNVE 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +H+ H   A+ GD LA+L+   GY+V  EY+INDAG QI+ LA+SV  RY 
Sbjct: 117 YVSANPTGYLHIAHAANAIYGDILANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYL 176

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------VKDYSV 238
           Q L N + +LP   Y G  +  V + L + Y  + +N    +   I        +K ++V
Sbjct: 177 Q-LQNINIELPTDAYHGQEIYLVAQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAV 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             ++  I+ DL ++N   D + SE+         I +++  + +  Y  +G         
Sbjct: 236 SYLLDEIKKDLASINTYIDTYTSENWI--RSSGRILEVLSKIKQHTYTLDG--------- 284

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
                     L  R+T  GDD DR L+KSDGSYTYF  D+AY   K+ +     +I V G
Sbjct: 285 ---------ALWLRTTAFGDDKDRVLIKSDGSYTYFTPDIAYHDYKFSKDNTTKLIDVWG 335

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ RL+A  +A+      + ++  ++++L ++    K+SKR+G  +T++ +V+ +
Sbjct: 336 TDHLGYIARLKAAMSALGYDPNNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEII 395

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D++R+ +     +  +  D      ++  NP++YVQYA+AR   +  +      + DF
Sbjct: 396 GKDALRWFLGSSSMNSHVVIDVDIALSKNNNNPLYYVQYAHARANQVLNK---QVYEFDF 452

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                     +   +T E +L+  L  Y + I NA   +EP++++ YLYDLA +FH +++
Sbjct: 453 --------KTDLLIETRERELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYA 504

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      ++    NN+ L+  R  LV  V  ++ +GL I+ +   ++M
Sbjct: 505 N------IKINDENNKALSAQRYTLVWCVKQVLANGLAIMKITPYDQM 546


>gi|260582207|ref|ZP_05850001.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094839|gb|EEW78733.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 577

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 121/617 (19%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK      
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEVFAEKARNYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRAMWKRLVDITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    D  +   
Sbjct: 279 -VENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKQAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +      D++       ++      D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-----TDINSTALLAALLT---IKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|329296274|ref|ZP_08253610.1| arginyl-tRNA synthetase [Plautia stali symbiont]
          Length = 576

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 227/617 (36%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E +      + +      G    N  M +++ LG  
Sbjct: 1   MNIQALLSDKVSQAMVAAGAPADCEPQ------VRQSAKVQFGDYQANGIMAVAKKLGQV 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  + +      V IAG GFIN++L   +L +  +  +         +    
Sbjct: 55  PRQLAEQVVQHLDLAGIASKVDIAGPGFINIFLDRQWLAQQAAQALQLPRLGVSEVT--P 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD +     F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNVAKEMHVGHVRSTIIGDAVVRTQEFLGHHVIRANHVGDWGTQFGMLI-- 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            +   QQ  ++ D  L +               A +   E   F E     +VK      
Sbjct: 171 AYLEKQQNEHHEDIALAD--------LEAFYREAKRTYDEDEAFAERARGYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++  + R + +  R  +   +    +  GI+   + K   
Sbjct: 223 YCRAMWKKL----VDITMSQNQQVYDRLNVTLTRKDVMGESLYNDMLPGIIADLREKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
               +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VTSEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++++   +          + +      + L +DG P K   R+G  I L  ++D
Sbjct: 338 DSRQHQHLQQAWTIVRKAGYVPESVPLEHHAFGMMLGKDGRPFK--TRSGGTIKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAVERAHALVSEKNPEMSAAELKELVEVVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A      L  D+            D  E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAGIEADSLRGDII---------LTDEREALLATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA +F G + H         + A    +   RLQL    A 
Sbjct: 506 ITQVARDGTPHVMCAYLYDLAGLFSGFYEHC------PILSAEEENVRNSRLQLAALTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+ +G+++   M
Sbjct: 560 TLKQGLDTLGIKTVERM 576


>gi|66043664|ref|YP_233505.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503765|sp|Q4ZZF5|SYR_PSEU2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|63254371|gb|AAY35467.1| Arginyl-tRNA synthetase, class Ic [Pseudomonas syringae pv.
           syringae B728a]
          Length = 579

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 127/610 (20%), Positives = 238/610 (39%), Gaps = 66/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  +  V IAG GF+N + + + L   L + +    +      G   +V ++
Sbjct: 65  KLIAALPADQQISKVEIAGPGFLNFFQNTAALAARLDAALADPEKLSVRKAGAAQRVVVD 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 125 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 183 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 231

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 232 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 287

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 288 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 347

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 348 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 405

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 406 TLVREKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 464

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 465 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 515

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 516 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 569

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 570 LLGLETLERM 579


>gi|330971745|gb|EGH71811.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 579

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 127/610 (20%), Positives = 238/610 (39%), Gaps = 66/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  +  V IAG GF+N + + + L   L + +    +      G   +V ++
Sbjct: 65  KLIAALPADEQISKVEIAGPGFLNFFQNTAALAARLDAALADPEKLSVRKAGAAQRVVVD 124

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 125 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 183 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 231

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 232 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 287

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 288 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 347

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 348 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 405

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 406 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 464

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 465 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 515

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 516 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 569

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 570 LLGLETLERM 579


>gi|260901277|ref|ZP_05909672.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308109838|gb|EFO47378.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 577

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/619 (20%), Positives = 236/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADSRLGVAAD--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A     +L  D+            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+E+   M
Sbjct: 559 AKTIKQGLSLLGIETLERM 577


>gi|28897635|ref|NP_797240.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838587|ref|ZP_01991254.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260365999|ref|ZP_05778484.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878212|ref|ZP_05890567.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895648|ref|ZP_05904144.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31076998|sp|Q87RD6|SYR_VIBPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28805847|dbj|BAC59124.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748005|gb|EDM58864.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088188|gb|EFO37883.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308090109|gb|EFO39804.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308111274|gb|EFO48814.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 577

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/619 (20%), Positives = 236/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADSRLGV--AAEEA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A     +L  D+            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+E+   M
Sbjct: 559 AKTIKQGLSLLGIETLERM 577


>gi|145635709|ref|ZP_01791404.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267032|gb|EDK07041.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 577

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHANEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    D  +   
Sbjct: 279 -VENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-ES 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +      +P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAVPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|328473382|gb|EGF44230.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 577

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 128/619 (20%), Positives = 236/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ++       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLNGIASKTEIAGPGFINIFLSEEFLAKQADAALADSRLGV--AAEEA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A     +L  D+            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+E+   M
Sbjct: 559 AKTIKQGLSLLGIETLERM 577


>gi|15611371|ref|NP_223022.1| arginyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7674359|sp|Q9ZMB9|SYR_HELPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|4154833|gb|AAD05887.1| ARGINYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 541

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 165/572 (28%), Positives = 285/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEILEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKIGSHEKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDRVVACKGYINFTLSLDFLERFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L +SV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGVSVWLAYKEHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++ DY+   M+  I+ +L AL+I
Sbjct: 184 TYPEVFYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSDYAKDLMLLEIKGNLDALDI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + D L +   +YE                   +   +S+
Sbjct: 244 HFDSYASEKEVFKHK----DAVFDRLEKANALYE----------------KDSKTWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
               +++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSSKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++        +       +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------LQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ +E++       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|327394189|dbj|BAK11611.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis AJ13355]
          Length = 562

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/587 (20%), Positives = 227/587 (38%), Gaps = 67/587 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
              + +      G    N  M +++ LG  P  +AE ++  + +      V IAG GFIN
Sbjct: 11  EPQVRQSAKVQFGDYQANGIMAVAKKLGQAPRQLAETVIQHLDLTGIASKVEIAGPGFIN 70

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L   +L +   + +         +  +   + +++ + N    MHVGH R  ++GD  
Sbjct: 71  IFLDRGWLAEHARNALQHPRLGVARV--EPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAA 128

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              +AF G+ V R  ++ D G Q   L   +    ++    N +++      G Y +   
Sbjct: 129 VRTLAFLGHNVIRANHVGDWGTQFGMLIAFL----EKQQNENHAEMALADLEGFYRE--- 181

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
              A +   E   F E     +VK        + +   L  + +  +  I    + R + 
Sbjct: 182 ---AKRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLVDITMSQNQHI----YDRLNV 234

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKS 327
           +  R  +   +    +  GI+   K+K     + +   ++F        G+ +   + K 
Sbjct: 235 TLTRKDVMGESLYNDMLPGIVADLKAKGLA-VESEGATVVFLDEYQNKEGEPMGVIIQKK 293

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
           DG Y Y   D+A  K +YE    D +IY + S    ++++   +          + +   
Sbjct: 294 DGGYLYTTTDIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYVPESVPLEHH 353

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
              + L +DG P K   R+G  I L  ++DE                           VG
Sbjct: 354 AFGMMLGKDGRPFK--TRSGGTIKLSDLLDEAYDRAYSLVSEKNPEMSEEERRALAEVVG 411

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A      +  D
Sbjct: 412 VSAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAGIEADAIQAD 470

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +         +  D  E  L   L ++  VI        P+ +  YLYD+A +F G + H
Sbjct: 471 I---------TLTDDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDVAGLFSGFYEH 521

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A +      RLQ+    A  +  GL+ +G+++ + M
Sbjct: 522 C------PILAAEDEATRQSRLQIAALTAKTLKLGLDTLGIKTVDRM 562


>gi|238919488|ref|YP_002933003.1| arginyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511644|sp|C5B832|SYR_EDWI9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238869057|gb|ACR68768.1| arginyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 577

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 228/617 (36%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++   L         E       ++        G    N  M  ++ +GL 
Sbjct: 1   MNIQEIISDKVTQALVAAGAPAGSEA------LVRPSAKVQFGDYQANGIMSAAKKMGLP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +VA + +D     V IAG GFIN++           +              + 
Sbjct: 55  PRQLAEQVVANLALDGIASKVEIAGPGFINIF--LDAAWLAAQADAALADPRLGVARVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + +  +     E     +         A K+  E   F E     +VK      
Sbjct: 172 ----YLEKVQGSS----ETGDMALADLEAFYREAKKHYDEDAAFAERARGYVVKLQGGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + ++ +      ++ R + +   D +   +    +  GI+   K+K   
Sbjct: 224 YCREMWRKLVDITMRQNQ----RNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F +      G+ +   + K DG Y Y   D+A  K +YE  G + ++Y +
Sbjct: 280 T-ESEGATVVFLNEFRNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILYYI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 397 EAIERAAKLIAAKNPELSGDELKALVEVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      +D +     +    +  +  E  L   L ++   
Sbjct: 456 NTAPYMQYAYTRVASIFKRAG-----IDENTLQGAI----TLTEEREKALATRLMQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I +      P+ +  YLY++A +F   +           + A    +   RL+L    A 
Sbjct: 507 ILSVAREGTPHVMCAYLYEVAGLFSSFYEAC------PILNAEEESVRASRLKLAALTAR 560

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++   M
Sbjct: 561 TLKTGLDTLGIKTVERM 577


>gi|223038788|ref|ZP_03609080.1| arginyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222879761|gb|EEF14850.1| arginyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 528

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 158/563 (28%), Positives = 279/563 (49%), Gaps = 42/563 (7%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           +++  +     +E+P+D    H +      L++ L   P+ IA  + ++ +     ++  
Sbjct: 8   EIKGAVGFDFALEKPKDKGLAHYAM-PTFSLAKQLKKSPVAIAAELASKFENSEVFEAA- 65

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            A  G+IN  L P++L K  S+ + +  E+ +     G K+ +E+VSANPTGP+H+GH R
Sbjct: 66  -ALNGYINFKLKPAFLDKFASASLANPSEFAKGGGTSGEKILLEYVSANPTGPLHIGHVR 124

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
            AV GDTLA +    G  +  EYYINDAG QI  L  S+    ++ L+      PE +Y 
Sbjct: 125 GAVFGDTLARVGLHIGENIATEYYINDAGNQIELLGTSISLWARENLFGESVAYPEKFYR 184

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           G Y++ + KE  +K+  E+  F +E     + ++    ++ +I+ +L    I  + + SE
Sbjct: 185 GDYIEPIAKEALEKFGKEI--FYDESRNLELAEFGKDRVLVLIKQNLADAQIFIENWASE 242

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             ++      +   +D L  +  +YE                   ++  +S+ VGD+ DR
Sbjct: 243 KSYY----DKLSLTLDRLKNENGIYES----------------EGKIWLKSSEVGDEKDR 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
            +++ DG  TY A D+ Y   K+ RGFD  I + G+DH GY+ R++A    +   + ++ 
Sbjct: 283 VIVREDGRGTYLAGDVVYHDDKFRRGFDRCINIWGADHHGYIARMKAALHLLGYDENRLE 342

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           ++L ++V L +DG   KMSKRAG+ + +  VV+E+G +++RFM L ++    L+FD  ++
Sbjct: 343 IILSQMVSLLKDGEAYKMSKRAGNVVLMSDVVEEIGCEALRFMFLSKRCDTHLEFDVDEL 402

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K +   NP+FY+ YA+AR   IF +A     D+    F                 L+   
Sbjct: 403 KREDSSNPIFYINYAHARINQIFAKAGKNVADIVGVKFAN--------LSEEGKNLLFEA 454

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                ++ ++   +   K+  YL  LA+ FH  ++  R          N  +L    L+L
Sbjct: 455 LTLNDILVDSFNTRSMNKICDYLKSLAANFHKFYNENRV-----VGSENEDEL----LKL 505

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              VA  I + L ++GV + ++M
Sbjct: 506 FAVVALSIKTALGLMGVAAKDKM 528


>gi|260776440|ref|ZP_05885335.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607663|gb|EEX33928.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 577

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 233/617 (37%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   S +            K 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAESALSDSRLGVAAEAQK- 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 114 -TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R QQ       +L +               + K   E   F  +    +VK      
Sbjct: 173 L-ERVQQESGEVSMELAD--------LEAFYRESKKLYDEDEEFAVKARNYVVKLQGGDE 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  R+ +   +    +  GI+   K +   
Sbjct: 224 YCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPGIVADLKEQGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
           + D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 QED-DGAQVVFLEEYKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +         ++ +      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEERAIKLIESKNPDLETAEKQNIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF +A     +L  D+            +  E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVASIFAKAGISMDELAGDI---------QITEEKEKSLIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA  F   +           +   +  +   RL+L    A 
Sbjct: 507 VQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILNTEDESVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+++   M
Sbjct: 561 TIKQGLSLLGIDTLERM 577


>gi|325578263|ref|ZP_08148398.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159999|gb|EGC72128.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 577

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 123/618 (19%), Positives = 234/618 (37%), Gaps = 74/618 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S L + +K+       +++     +I +      G    N  M  ++ LGL+
Sbjct: 1   MNI----QSILSDKIKQAMIAAGADEQC--DALIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++    +    +   IAG GFIN++L+P++L   +S+ +    +       + 
Sbjct: 55  PREFAQKVLDHADLSDVAEKTEIAGPGFINIFLNPTWLANNVSAALKD--QNLGVSANEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK      
Sbjct: 173 LEKMENEHASEMELQDLEAFYRE----------AKKHYDEDEAFAEKARNYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKKLVDITMQQNQ----RNYDRLNVTLTEKDVMGESLYNPMLPAIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
               D   L+          G+ +   + K DG + Y   D+A  K +YE    D  +  
Sbjct: 279 V--EDEGALVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  S ++++   +           ++      + L +DG P K   R G  + L  ++
Sbjct: 337 SDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  SV++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATVLINEKNTNLSDEEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D++        I      D  E  L + L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFNKA-----DVNPTALAEAKI---QLSDEKERALAIKLLQFEE 505

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L     
Sbjct: 506 AVQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDENVKLSRLKLASLTE 559

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 560 KTLKQGLALLGIKTIEKM 577


>gi|308051227|ref|YP_003914793.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307633417|gb|ADN77719.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 582

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 128/611 (20%), Positives = 232/611 (37%), Gaps = 65/611 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  +  +  +  +      R+ ++R +D +HG L+TN AM+L++P G +P  +A 
Sbjct: 5   IQQLLEQTVDRLKAQAIIPADAAPRLQVDRTKDKSHGDLATNLAMMLAKPAGKNPRELAG 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V    IAG GFIN +L   +L K +   + S        I     +  +
Sbjct: 65  LIIDNLPESTLVAKTEIAGPGFINFFLDAGWLGKQI-ETIASDDRANVAPIAAPQTIVTD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    M V H R  V+GD +   + F G+ V R  +I D G Q   L   +     
Sbjct: 124 YSAPNVAKEMAVHHIRSTVIGDAVTRTLEFLGHNVVRANHIGDWGTQFGMLIAYLEKMEN 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           ++  + D    E +Y            A K   E   F E     +VK          + 
Sbjct: 184 ESAADMDLSDLEAFYRE----------AKKCYDEDGEFAERARNYVVKLQGGDEYCNAMW 233

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L  + +  +  I    + R   S   D I   +    +   I+     +     D   
Sbjct: 234 RKLVDITMAQNQAI----YDRLGVSLSNDDIMGESLYNPMLPEIVADLTKQGLAVED-QG 288

Query: 307 KQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
            +++F     G D   +   + K DG + Y   D+A  K + +    D ++Y + S  + 
Sbjct: 289 AKVVFLDEFKGKDGNPMGVIIQKRDGGFLYTTTDIAAAKYRVDTFAADRILYFIDSRQAQ 348

Query: 363 YVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           ++++   +A              C   + L +DG P K   R+G  + L  +++E     
Sbjct: 349 HLQQAWLIARKAGYLPDTTTTEHCAFGMMLGKDGKPFK--TRSGGTVKLADLLEEAHQRA 406

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 V   SV++  L +  +    FD+  +    + N   Y+
Sbjct: 407 TKLIGEKNPDLQGDALDTIAATVAMASVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYM 465

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            YA++R +SIFR+A     +L+  +               E  L   L ++   ++    
Sbjct: 466 LYAFSRIQSIFRKAGVNAAELNGTVV---------LAHDKEEALAQKLVQFNDAVQGVAN 516

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +  YLY+LA  F   +      P  +   A +      RL+L  A A+ +  GL
Sbjct: 517 KGMPHLMCTYLYELAGAFMSFYEAC---PINKDDVAEDA--KASRLRLCAATANTLKVGL 571

Query: 575 NIIGVESPNEM 585
            ++G+ + + M
Sbjct: 572 GLLGINTLDRM 582


>gi|118474762|ref|YP_892573.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166232772|sp|A0RQU0|SYR_CAMFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118413988|gb|ABK82408.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 531

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 166/555 (29%), Positives = 288/555 (51%), Gaps = 41/555 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
             ++E+P+D    H +T  A  L++     P  IA  +  + +     D   I   G++N
Sbjct: 16  DFILEKPKDKNLAHYATPFAFSLAKEFKKSPAIIASQLALKFENHELFDVFSI--NGYLN 73

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L   +L  + ++ +     +G         + IE++SANPTGP+H+GH R AV GDTL
Sbjct: 74  FKLKGEFLNSLANNALSLAESFGSKKPQSQKDIFIEYISANPTGPLHIGHVRGAVYGDTL 133

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A +  + G +V  EYYINDAG QI+ L +S+    ++AL+N +   P+ YY G Y++ + 
Sbjct: 134 ARVARYIGLDVFTEYYINDAGNQIDLLGISISLFAREALFNENVQYPDKYYRGEYIEDIA 193

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K    K+  ++  F +E     + ++    ++KII+ DL+ + I  + + SE   +    
Sbjct: 194 KLALGKFGKDI--FYDESRNLELAEFGKDEVLKIIKKDLQDVGIFIESWASEKSLY---- 247

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I  LA  G +YE                  +     STM+GDD DR +++SDG 
Sbjct: 248 DELEGTIKKLASSGQMYE----------------KDQTTYIASTMLGDDSDRVVIRSDGR 291

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY A D+ Y   K+++G+ + I + G+DH GY+ R++A    +   ++++ V+L ++V 
Sbjct: 292 PTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINFLGYDESRLEVILMQMVS 351

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L ++G P KMSKRAG  + +  ++ E+GSD++RF+ + + N+  L+FD  ++K++   NP
Sbjct: 352 LLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKANTSSLEFDIDELKKEDSSNP 411

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +FY+ YA+AR   +F +A  +  D+        V    S  D S   L+      P V+E
Sbjct: 412 IFYINYAHARVNQVFAKASKLPNDV--------VGADLSNLDESGKNLLFEALILPEVLE 463

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  ++  +K+  YL  L++ FH  ++  R          N  +L    L+L   VA  I
Sbjct: 464 DAVTSRSLHKIPEYLKSLSASFHKFYNENRV-----VGSKNEDEL----LKLFSVVALSI 514

Query: 571 NSGLNIIGVESPNEM 585
              LN+IG+++ ++M
Sbjct: 515 KVALNLIGIKAKDKM 529


>gi|320157028|ref|YP_004189407.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932340|gb|ADV87204.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 577

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 237/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +        +   + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADPRLGVASE--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A     DL  ++            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|317008966|gb|ADU79546.1| arginyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 541

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 169/572 (29%), Positives = 288/572 (50%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEILEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134
             +F   +A KG+IN  LS  +L +     +    ++G +    +  K+ +EFVSANPTG
Sbjct: 64  QGLFDSVVACKGYINFTLSLDFLERSTQKALELKEQFGSQPKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+D+L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKKADNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L +   +YE                   ++  +S+
Sbjct: 244 HFDSYASEKEVFKHK----DAVFERLEKANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFKQNYTQYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++VRL +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    
Sbjct: 344 GHDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++        +    S  +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------LQTPLSNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ IE++       K+  Y   LAS FH  ++ G+           N  
Sbjct: 456 EKYLLFSALSLPKAIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  +++   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLSNAFKLLGIEIKTKIS 538


>gi|254429152|ref|ZP_05042859.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195321|gb|EDX90280.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 584

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 127/613 (20%), Positives = 248/613 (40%), Gaps = 73/613 (11%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            +++ L  +     +       + I+R +D +HG  +TN A++L++P G+ P  +AE ++
Sbjct: 8   LIESALDTLIDDGTLPADAKRPVQIDRTKDKSHGDFATNIALMLAKPAGMKPRDLAEKLI 67

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           A +  D  V  V IAG GFIN + +  +L  +L S +      G +   +   V +++ S
Sbjct: 68  AALPSDSAVAKVDIAGPGFINFFQADDWLTGLLDSALADD-FLGIDRPEQPQTVVVDYSS 126

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ-- 187
            N    MHVGH R  ++GD +   + F G+ V R+ ++ D G Q   L   +  +  +  
Sbjct: 127 PNLAKEMHVGHLRSTIIGDAVVRTLEFLGHTVIRQNHVGDWGTQFGMLLAYLEEQKAEEG 186

Query: 188 --ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMK 243
              L    ++L   Y             AD+  + ++     ++  L +  +++ Q  + 
Sbjct: 187 ERELSRELANLETFYRAAKQRFDESDTFADRARALVVKLQSGDDYCLSLWAEFN-QVSLS 245

Query: 244 IIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +     L +         E  ++      +  ++ +L  +G + E       S+  Q 
Sbjct: 246 HCQAIYDRLGVSLTPSDVRGESAYN----DDLAQVVADLDSKGLLSE-------SQGAQC 294

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             MD  +        G+ +   + K+DG Y Y  +DLA  + +      D M+Y +    
Sbjct: 295 VFMDAFK-----NKEGEPLPVIVRKADGGYLYATSDLAALRYRAGTLQADRMLYFVDQRQ 349

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--- 416
           + + +++  +A   +    Q  +       +   DG P K   R G  + L  ++DE   
Sbjct: 350 ALHFQQMFTLAKLAAFVPEQTELAHMGFGTMNGPDGRPFK--TRDGGTVKLVDLLDEAEQ 407

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  S    F+F ++    + N   
Sbjct: 408 RAFALVQEKNPQLDEDELRTIARSVGIGAVKYADLSKNRSSDYIFNFEQMLSF-EGNTAP 466

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R  S+FR+A+     +  D             + +E  L   L ++  V++N 
Sbjct: 467 YLLYAYTRVASVFRKAERDMASVSGDFL---------LNEDAEQALAARLVQFAEVLQNV 517

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P+ L+ YLYD+A +F   + H         + + +  +   RL+L    A  +  
Sbjct: 518 ADKGQPHLLSTYLYDVAGLFSSFYEHC------PILSSEDEGIRNSRLKLAALTARTLKH 571

Query: 573 GLNIIGVESPNEM 585
           G+ ++G+     M
Sbjct: 572 GMELLGLSPLERM 584


>gi|9715730|emb|CAC01600.1| putative arginyl-tRNA synthetase [Anabaena circinalis 90]
          Length = 585

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 146/620 (23%), Positives = 242/620 (39%), Gaps = 81/620 (13%)

Query: 8   SSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +LK  L + +      +    D I++    +   G    N A+ LS+ LG  P  IA 
Sbjct: 5   QEQLKLKLTQALVAAFGTDYTNTDPILVSAS-NPKFGDYQANVALSLSKKLGKQPRIIAG 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV+++ +    +   IAG GFINL L  SYL   L++I +     G        K  ++
Sbjct: 64  EIVSKLDVSDICEPPEIAGPGFINLKLQTSYLEAQLNAIQID-ARLGIPTATNPQKQIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD++A ++ F G++V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDSIARILEFCGHDVLRLNHVGDWGTQFGMLITYLREVYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-----VQAM 241
            AL   ++ L  G     Y K      A +   E   F E     +V+  +     + A 
Sbjct: 183 DALTTANA-LDIGDLVNFYRK------AKQRFDEDPVFQETSRQEVVRLQAGAEDTLHAW 235

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKT 298
             +     +   I +D+   E    RG+      +  +++NLA  G +         S+ 
Sbjct: 236 KLLCEQSRQEFQIIYDLLNVE-LIERGESFYNPLLPKVVENLATTGLL-------ESSQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
            +   +D       +   G+ +   + K+DG Y Y   DLA    +  E     ++YV  
Sbjct: 288 AKCVFLDG-----FTNREGNPLPLIVQKTDGGYNYATTDLAALGYRIQEDKAKRIVYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              S +  +   VA   +     +  V +   + L  DG   K   R+GD + LR ++DE
Sbjct: 343 EGQSNHFAQFFQVARKANWIPEDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDE 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +  +    F + K+   
Sbjct: 401 AINRARADIENRLQEDERTETEEFMQNVAEVVGISAVKYADLSQNRTSSYVFSYDKMLSL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            K N   Y+ YAY R + I RQ        + D     +  Q    + +EL L  HL + 
Sbjct: 461 -KGNTAPYLLYAYVRIQGISRQG-------NIDFTNLGINRQILLKEDAELTLAKHLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             VI+       P +L  YLY L+  F+  + +    P L+    +       RL L   
Sbjct: 513 DEVIKEVEQDLLPNRLCDYLYQLSDKFNKFYENC---PVLK----SEEPARTSRLMLCDL 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+++G++    M
Sbjct: 566 TAKTLKLGLSLLGIKVLERM 585


>gi|271500744|ref|YP_003333769.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344299|gb|ACZ77064.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 576

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 124/619 (20%), Positives = 239/619 (38%), Gaps = 77/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E       ++ +      G    N  M  ++ LG+ 
Sbjct: 1   MNIQALLSEKVHQAMIAAGAPADSEA------MVRQSAKAQFGDYQANGIMAAAKKLGMP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  +++D       IAG GFIN++L   +L   L    ++  + G + + + 
Sbjct: 55  PRQLAEKVVNTLQLDGIAAKTEIAGPGFINIFLDSQWLSAQL-EHALAAPKLGVSPV-EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVG+ R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAH 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYS 237
           +      +  + +    E +Y     ++   E+  + +      L   +E    + +   
Sbjct: 173 LEDVQNDSTQDLELADLEAFYREAKKQYDDDEVFAERARGYVVKLQGGDEYCRSMWRKLV 232

Query: 238 VQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              M++  R     LN+    +  + E  ++   P    DI+ +L  +G   E       
Sbjct: 233 DITMVQNQR-SYDRLNVSLTPENVMGESLYNAMLP----DIVADLKAKGLAEE------- 280

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           S+      +D  +        G+ +   + K DG Y Y   D+A  K +YE+ G + ++Y
Sbjct: 281 SEGAIVVYLDEYK-----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYEKLGANRVLY 335

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +  ++          +++      + L +DG P K   RAG  I L  +
Sbjct: 336 YIDSRQHQHLMQAWSIVRKAGYVPESVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSEL 393

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 394 LDEAYERALTLIAGKNPEMERTELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNML-AF 452

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF++A      L   +               E  L   L ++ 
Sbjct: 453 EGNTAPYMQYAYTRVSSIFKRAGVEESSLTQPIV---------LTAEHEQALATRLLQFE 503

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +        P+ +  YLYDLA +F G + +         + A+N      RL+L    
Sbjct: 504 ETVTTVARDGTPHVMCAYLYDLAGLFSGFYENC------PILNADNDSTRQSRLKLALLT 557

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  + +GL+ +G+++  +M
Sbjct: 558 AKTLKTGLDTLGIQTVEKM 576


>gi|90022024|ref|YP_527851.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|109895032|sp|Q21I40|SYR_SACD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89951624|gb|ABD81639.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 579

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/616 (20%), Positives = 248/616 (40%), Gaps = 68/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L + +K       +       + +   +    G    N AM  ++ L  +
Sbjct: 1   MNI----RNLLNDRVKSAMNDAGIPADYSPHLAV--SKKAGFGDYQANGAMGAAKALKTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+  + ++     V IAG GFIN++L P +L +   + V +    G       
Sbjct: 55  PREVAQKIIDNLDLNGIASKVEIAGPGFINIHLDPKWLAQQTVA-VTNSTNLGILPKNNP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A ++ F+G +V R+ ++ D G Q   L   
Sbjct: 114 ETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHVGDWGTQFGMLIAE 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     Q       +L      G Y      + A K+  +   F +     +VK  S  A
Sbjct: 174 L---EDQLGSGERPELALQDLEGFY------QQAKKHFDDDPAFADRARDYVVKLQSGDA 224

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +  + + +++ H     E+ + + + +     +   +        ++   +++   
Sbjct: 225 QVNKLWQEFRRVSLLHA----EEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLA 280

Query: 301 KCDMDRKQLLF--RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
             D   K +     +   GD     + K DG Y Y  +DLA  + +      + ++Y + 
Sbjct: 281 VEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFID 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +  S +++++  +A         ++         L  DG P K   R+G  + L  ++DE
Sbjct: 341 ARQSLHMQQVFTLARKAGFADEWLSTEHHAFGTMLGSDGKPFK--TRSGGTVKLAQLLDE 398

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  +V++  L +  +    F++  +    + N
Sbjct: 399 AVERAAKEVRTKNPDLTEEEMAEVASKVGIGAVKYADLCKTRTNDYVFNWESML-AFEGN 457

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R RSIFR+A +     + ++         +  +  E+QL + L + P ++
Sbjct: 458 TGPYMQYAYTRIRSIFRRANENMDTFESEV---------NLTEPQEVQLAIKLLQLPEIV 508

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E       P+ +  YLYDLAS+F   +      P L+  +     +   RLQL   VA  
Sbjct: 509 EQIAADAYPHVMCNYLYDLASLFMTFYEAC---PILK--EGVEPAVKTSRLQLSKGVART 563

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+E   +M
Sbjct: 564 LAQGLDLLGIEVMEKM 579


>gi|16273477|ref|NP_439728.1| arginyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580361|ref|ZP_05848190.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174541|sp|P43832|SYR_HAEIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1574424|gb|AAC23231.1| arginyl-tRNA synthetase (argS) [Haemophilus influenzae Rd KW20]
 gi|260093038|gb|EEW76972.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 577

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|294155847|ref|YP_003560231.1| arginine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600461|gb|ADE19957.1| arginine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 544

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 177/592 (29%), Positives = 296/592 (50%), Gaps = 55/592 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    +  ++L   L +I  K+K+ K   +  +IE   +      ST+ A I+++   L+
Sbjct: 1   MNKI-EIKNKLLEELTKISKKLKLAK---EPFLIEPKTNA---DFSTSMA-IINKTTELN 52

Query: 61  PLTIAELIVARIKI---DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           P+ +A  I   +     +  +  + +AG GFIN++L   + ++ ++ I+  G +YG+   
Sbjct: 53  PVQLANKIKDELNKVSKNLYLKDIEVAGPGFINIFLDDEFFKQSVNEILKKGSDYGKGN- 111

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +   +N+E+VSANPTG +HVGH R A +G  ++++  F+G +VTREYYINDAG QI+ L
Sbjct: 112 -RKGFLNLEWVSANPTGYLHVGHARNAAIGSAVSNICEFAGIKVTREYYINDAGNQIDML 170

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL-NFPEEKWLPIVKDY 236
           A S+F RYQQ +++    +PE  Y G  +    +++  KY  +   +  +   L   K  
Sbjct: 171 ANSLFARYQQ-IFDKKYKMPEECYKGDDITWAAEQMFKKYGEKFKGDECKGDVLNTFKKD 229

Query: 237 SVQAMMKIIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            V   +  +  DL+    I+ DI++SE   +  D   I++ +  L               
Sbjct: 230 GVDLFLGEVEKDLEKFGGIKFDIWMSEKSLYENDQKAIKETLKKLKNS------------ 277

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--MI 353
                   +       ++T+ GDD DR L+KSDGS TYF  D+AY   K+ R      ++
Sbjct: 278 -------YVKDGATWLKTTIHGDDKDRVLIKSDGSLTYFTPDIAYHHIKFHREKGRTVVM 330

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G+DHSGY+KR++     + E    + VL  +LVRL ++G   KMSKR G    LR  
Sbjct: 331 NVWGADHSGYIKRMKCAIEDLGENPDDLVVLCMQLVRLVKNGEEYKMSKRKGTSFYLRDF 390

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +D VG DS RF++L R  +  LDFD      ++ +NP   VQYA AR  S+  ++     
Sbjct: 391 IDLVGVDSARFILLDRTYNSKLDFDIDIASNKTNDNPAILVQYANARAFSLLEKSTLDLK 450

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            ++   F        +EFD    +LI  L E+P +++ +        +  YL  LA  F+
Sbjct: 451 GIELSEFS-------NEFD---KKLISTLLEFPEIVDRSAELYLTNLMTQYLIKLAKDFN 500

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +S+       + +   N +     L LV A  +++ +G+ +IG+   ++M
Sbjct: 501 SWYSNSP-----KVIGHENEESM---LSLVKATNTVLETGMKLIGITINHKM 544


>gi|170077224|ref|YP_001733862.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692817|sp|B1XPX8|SYR_SYNP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169884893|gb|ACA98606.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 585

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 142/620 (22%), Positives = 238/620 (38%), Gaps = 79/620 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S+LK  + E   K   E       ++    +   G   +N A+ L++ L  +P  IA+
Sbjct: 4   ILSQLKTAVSEALIKAFGEDLKDTDPLVVPASNPKFGDYQSNVALSLTKILKKNPREIAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  + I    ++  IAG GFIN  L PSYL  +L  +  S             KV ++
Sbjct: 64  SIIEALDIADTCENPTIAGPGFINFSLKPSYLATLLKEVQQSD-RLAIEPAENPQKVIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD++A ++ F G +V R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYP 182

Query: 187 QALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQA 240
            AL   D+    DL   Y          +   +   ++++     +E+          Q 
Sbjct: 183 DALTKADALDIGDLVAFYKKAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAW-----QL 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R + + +    DI ++E      +P  + D++  L   G + E            
Sbjct: 238 LCEQSRREFQKIYDILDIKLTERGESFYNPY-LADVLTALDEVGLLEEDA---------- 286

Query: 301 KCDMDRKQLLFRSTMVGDDVDR---PLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVM 356
                  Q +F       D DR    + KSDG + Y   DLA  + + +      +IYV 
Sbjct: 287 -----GAQCVFLEGFKNKDGDRLPLIVQKSDGGFNYATTDLAAIRYRIKEDQAKRIIYVT 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            S  +G+  ++  VA         + V+      L +     K+  RAGD I L+ ++DE
Sbjct: 342 DSGQAGHFAQVFQVAERAGFLPDDVEVVHVPFG-LVQGEDGKKLKTRAGDTIKLKDLLDE 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +  +    F F K+   
Sbjct: 401 AVNRSRADLEKRLAEDERQETADFIEKVSQVVGIGAVKYADLSQNRTSNYIFSFDKMLAL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAY R + + RQ          DL            + +EL L  HL + 
Sbjct: 461 -QGNTAPYMLYAYVRVQGVSRQGG-------IDLSTLPTDTPIILEEAAELTLAKHLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+ +      P +L  YLYDL+  F+  +           ++A      + RL L   
Sbjct: 513 SEVLMSVEQDLMPNRLCEYLYDLSRKFNQFYEAC------PILKAEG-DRRISRLILADT 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL+++G+E  + M
Sbjct: 566 TARTLKLGLSLLGIEVLDRM 585


>gi|70733943|ref|YP_257583.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|109895019|sp|Q4KJK0|SYR_PSEF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68348242|gb|AAY95848.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 578

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/614 (21%), Positives = 243/614 (39%), Gaps = 75/614 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  + ++  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQAITQLVTEGVLPEGLTPAIQVENTRDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A +    D+    IAG GFIN + +   L   L + +      G    G   +  I+
Sbjct: 65  KIIAALPAHEDLSKAEIAGPGFINFFQNTQALAARLDAALGDD-HLGVRKAGPAQRTVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L     +  +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDWGTQFGMLMA---YLEE 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFPEE-----KWLPIVKDYSVQA 240
             + +++    E +Y     +    E  AD+    ++          +     KD S+  
Sbjct: 181 NPITSDELSDLENFYRAAKQRFDESEAFADRARGLVVKLQAGDPDCLELWTKFKDISLSH 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             KI   +L  + +     + E  ++      + +++++L  QG + E       S   Q
Sbjct: 241 CQKIY--ELLNVKLTMADVMGESAYN----DDLINVVNDLKAQGLLVE-------SNGAQ 287

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
              +D  +        G+ +   ++K+DG Y Y   DLA  + +  +   D  +Y +   
Sbjct: 288 CVFLDEFK-----NAEGEPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYFVDQR 342

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + + +++ AVA         + +       +   DG P K   R G  + L  ++ E  
Sbjct: 343 QALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLTEAE 400

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG DSV++  L +  +    F+F  +    + N  
Sbjct: 401 ERAYALVKEKNPQLPEADLRSIAKVVGIDSVKYADLSKHRTSDYSFNFDLMLNF-EGNTA 459

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YAY R   +FR+    F ++           Q       EL+L   LA++  ++ N
Sbjct: 460 PYLLYAYTRAAGVFRKLGKDFSEVGG---------QIELHAAQELELAAKLAQFGEILNN 510

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P+ L  YLYD+A +F   + +         + A        RL+L       + 
Sbjct: 511 VAEKGTPHILCTYLYDVAGLFSSFYENC------PILAAETPTQMHSRLRLTELTRRTLK 564

Query: 572 SGLNIIGVESPNEM 585
            GL ++G++   +M
Sbjct: 565 QGLELLGLKVLEQM 578


>gi|27363628|ref|NP_759156.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|31077005|sp|Q8DFR1|SYR_VIBVU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|27359744|gb|AAO08683.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 577

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 237/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +        +   + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADPRLGVASE--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARGYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A     DL  ++            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|251792745|ref|YP_003007471.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534138|gb|ACS97384.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 577

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +       + E       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQSILSEKIKQAMLAAGADSQCEA------LVRQSGKVQFGDYQANGIMPAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+L++A+ ++    +   IAG GFIN++L   +L + + + V              
Sbjct: 55  PREFAQLVLAKAELQDITEKTEIAGPGFINIFLKDGWLAENIGNAVKDPKLGIH--HQDK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMENEHASEMELCDLEAFYRA----------AKKHYDEDPIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +  GI+   K +   
Sbjct: 223 YCRTMWQKLVKITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   +++       D   +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 VED-DGAWVVYLDEFKNKDGGSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +            +      + L +DG P K   R+GD + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYAPDSFQLEHKNFGMMLGKDGKPFK--TRSGDTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERAGVLISQKSTALSDQEKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +++    +++          Q S  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNRSQIALSEVEQA--------QLSITDEKERALAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+       P+ L  YLY+LA VF   + H         +   ++++ + RL+L      
Sbjct: 507 IQIVAKDGTPHVLCTYLYELAGVFSSFYEHC------PILNNEDQQVKLSRLKLALLTER 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLGLLGIKTVEKM 577


>gi|68249833|ref|YP_248945.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335742|sp|Q4QL12|SYR_HAEI8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68058032|gb|AAX88285.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 577

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 121/617 (19%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       ++ +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMVIAGADQSCDA------LVRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  +++
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLN 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           +G  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A N  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAENESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|330445483|ref|ZP_08309135.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489674|dbj|GAA03632.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 576

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 124/620 (20%), Positives = 238/620 (38%), Gaps = 79/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D   + V IAG GFIN++L+ ++L +     +    E         
Sbjct: 55  PREFAQKVIDCLDLDGIAEKVEIAGPGFINIFLNKAWLAERGEEALKD--ERLAVNTETA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L  +
Sbjct: 113 QNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIAN 172

Query: 181 VFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +  + ++   +  N SDL   Y     L     E  +   + ++     +E  L   K  
Sbjct: 173 MQRKEKEGADVSMNISDLEGFYRESKVLYDEDAEFGETARNFVVRLQSGDEYCLEKWKQL 232

Query: 237 SVQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            V+  +K  + +   LN+    D  + E  ++   P     ++ +L  +G   E      
Sbjct: 233 -VEITLKQNQRNYDRLNVSLTDDNVMGESMYNDMLPG----VVADLKEKGLAVE------ 281

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            S       +D  +        G+ +   + K DG Y Y   D+A  K +YE+   D ++
Sbjct: 282 -SDGATVVYLDEYK-----NKDGEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVL 335

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y + S    ++     +          +++      + L +DG P K   RAG  + L  
Sbjct: 336 YFIDSRQHQHLMMAWEIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLAD 393

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++DE                           V   +V++  L +  +    FD+  +   
Sbjct: 394 LLDEAEERANKLIEEKNPELSAEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNML-A 452

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+QYAY R  SIF++A     DL   +            D  E  L+  L ++
Sbjct: 453 FEGNTAPYMQYAYTRVASIFKRANVELADLTQPIV---------ITDEKEQALLSKLLQF 503

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA +F   +           +   +      RL+L   
Sbjct: 504 EEAVQSVAREGQPHLMCTYLFELAGMFSSFYEAC-------PILNADEATKQSRLKLAML 556

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL+++G+E+   M
Sbjct: 557 TAKTIKQGLDLLGIETLERM 576


>gi|254779018|ref|YP_003057123.1| arginyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000929|emb|CAX28865.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)E
           [Helicobacter pylori B38]
          Length = 541

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 165/572 (28%), Positives = 283/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVACKGYINFTLSLDFLERFTQKALELKEKFGSQIKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYKEHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+D+L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKKANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L +   +YE                   ++  +S+
Sbjct: 244 HFDSYASEKEVFKHK----DAVFERLEKANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY   D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKGDRSYTYLTGDVIYHDKKFQQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++VRL +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    
Sbjct: 344 GHDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++        +       +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------LQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ +E++       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|152999024|ref|YP_001364705.1| arginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160873617|ref|YP_001552933.1| arginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217971704|ref|YP_002356455.1| arginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304411529|ref|ZP_07393142.1| arginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307306695|ref|ZP_07586437.1| arginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166232840|sp|A6WIK3|SYR_SHEB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083547|sp|A9KYS9|SYR_SHEB9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782981|sp|B8E6G9|SYR_SHEB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|151363642|gb|ABS06642.1| arginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160859139|gb|ABX47673.1| arginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217496839|gb|ACK45032.1| arginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304350056|gb|EFM14461.1| arginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306910663|gb|EFN41092.1| arginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315265846|gb|ADT92699.1| arginyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 581

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 131/615 (21%), Positives = 246/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  L+    +  V      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTLESFKQQGIVPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN +++ S L   L + V       +        V ++
Sbjct: 65  LIIDTLPASAYVAKVEIAGPGFINFFINDSALADQLQNAVNDEHLGIKLPT--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 KNGEKAQLELSDLENFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +    L +         E  ++    + +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHEVYARLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y  +DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEA----FR-NKEGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R+G  + L  +++E 
Sbjct: 346 RQALHFQQVFSLAKLAKFVREDMSLEHLGFGTMNGEDGRPFK--TRSGGVVKLVDLLEEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NVRALELVRSKNPDMDEVTLTEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++        D DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRV------TDLDLSQAKIVLE----HEKEKDLGNKLAQFGEILS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N      RL L    A  +
Sbjct: 513 RVVDKGQPHVLCAYLYELAGAFSSFYEAC------PVLAADNDAQKNSRLLLAQLTARTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|315634078|ref|ZP_07889367.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477328|gb|EFU68071.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 577

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 239/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +       + E       ++ +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSEKIKQAMIAAGADAQCEA------LVRQSGKVQFGDYQANGIMPAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++ + ++    +   IAG GFIN++L  ++L   +S  V        N   + 
Sbjct: 55  PREFAQSVLDKAELQDIAEKTEIAGPGFINIFLKDTWLADNISRAVQDPKLGVHNP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMENEHASEMELSDLEAFYRA----------AKKHYDEDPVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +  GI+   K +   
Sbjct: 223 YCRTMWQKLVKITMQQNQH----NYDRLNVTLTDKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 VED-DGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +            +      + L +DG P K   R+GD + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFK--TRSGDTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERAGVLISQKSTALSEQEKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +++    +++            S  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNRSQIALSEVEQATL--------SITDEKERALAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA VF   + H         +  ++ ++ + RL+L      
Sbjct: 507 VQVVGKEGTPHVLCAYLYELAGVFSSFYEHC------PILNNDDHQVKLSRLKLALLTER 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 561 TLKQGLDLLGIKTVEKM 577


>gi|269138777|ref|YP_003295478.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984438|gb|ACY84267.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558769|gb|ADM41433.1| Arginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 577

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/619 (19%), Positives = 232/619 (37%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L         E       ++        G    N  M  ++ +GL 
Sbjct: 1   MNIQAIISDKVTQALVAAGAPADSEA------LVRPSAKVQFGDYQANGIMAAAKKMGLP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +VA + +D     V IAG GFIN++           +              + 
Sbjct: 55  PRQLAEQVVANLALDGIASKVEIAGPGFINIF--LDAAWLAAQADAALADPRLGVARVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIA- 171

Query: 181 VFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               Y + +  +    D+        Y +      A K+  E   F E     +VK    
Sbjct: 172 ----YLEKVQGSSKTGDMALADLEAFYRE------AKKHYDEDAAFAERARGYVVKLQGG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
               + +   L  + ++ +      ++ R + +   D +   +    +  GI+   K+K 
Sbjct: 222 DEYCREMWRKLVDITMRQNQ----RNYDRLNVTLTDDDVMGESLYNPMLPGIVADLKAKG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               + +   ++F        G+ +   + K DG Y Y   D+A  K +YE  G + ++Y
Sbjct: 278 LAT-ESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLGANRILY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +  A+          +++      + L +DG P K   RAG  I L  +
Sbjct: 337 YIDSRQHQHLMQAWAIVRKAGYVPDSVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           VG  +V++  L +  +    FD+  +    
Sbjct: 395 LDEAIERAAKLIAAKNPELSGDELKALVEVVGIGAVKYADLSKNRTTDYIFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF++A      +D +     +    +  +  E  L   L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFKRAG-----IDENALQGAI----TLTEDREKALATRLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I +      P+ +  YLY++A +F   +           + A+   +   RL+L    
Sbjct: 505 ETILSVAREGTPHVMCAYLYEVAGLFSSFYEAC------PILNADEESVCASRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  + +GL+ +G+++   M
Sbjct: 559 ARTLKTGLDTLGIKTVERM 577


>gi|317013765|gb|ADU81201.1| arginyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 541

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 164/572 (28%), Positives = 286/572 (50%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I     +
Sbjct: 4   LIKGVLEEILEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISSHKKI 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDRVVACKGYINFTLSLDFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L +SV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGISVWLAYKEHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+ ++     L    EE  + ++  Y+   M+  I+D+L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKKASNDLEPSLFKGNEETIIEVLSGYAKDLMLLEIKDNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L +   +YE                   ++  +S+
Sbjct: 244 HFDSYASEREIFKCK----DAVFERLKKANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
               +++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSSKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++                +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------WQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ +E++       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|157427804|ref|NP_001098808.1| arginyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|300681170|sp|A7YW98|SYRC_BOVIN RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|157278917|gb|AAI34469.1| RARS protein [Bos taurus]
 gi|296485074|gb|DAA27189.1| arginyl-tRNA synthetase [Bos taurus]
          Length = 660

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 137/618 (22%), Positives = 264/618 (42%), Gaps = 76/618 (12%)

Query: 11  LKNYLKEID-CKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMIL-----SRPLGLDPL 62
           + + L+E+  C IK    +L+   +++   +    G    N+AM +     ++   ++P 
Sbjct: 76  INSCLEEVFGCAIKAAYPVLENPPLIVTPSQQPKFGDYQCNSAMGICQMLKTKEQKVNPR 135

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE IV  +  +  ++ V IAG GFIN++L   ++ + L++++V+G++     IG+  K
Sbjct: 136 EIAENIVKHLPDNEYIEKVEIAGPGFINIHLRKGFVSQQLTNLLVNGVKIP--SIGENKK 193

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++G+++  L  F+GY V R  ++ D G Q   L   + 
Sbjct: 194 VIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQ 253

Query: 183 WRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + + 
Sbjct: 254 DKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIK--AWKL 310

Query: 241 MMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  + R +   +    DI + E    F++     + DI+     +G+V            
Sbjct: 311 ICDVSRQEFNKIYEALDISLIERGESFYQ---DRMHDIVKEFEDRGFVQVD--------- 358

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
                 D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   D +IYV+ 
Sbjct: 359 ------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVD 409

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  S + + +   A  +      +  +      +       K   R+G+ + L  +++E 
Sbjct: 410 NGQSLHFQTVFGAAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEG 469

Query: 417 ----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                       V    +++  L         F F K+ +  + 
Sbjct: 470 LKRSMDKLKEKERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRG 528

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPR 507
           N   Y+ YA+ R RSI R A     ++D ++  +     E   D   E +L   +  +P 
Sbjct: 529 NTAAYLLYAFTRIRSIARLA-----NIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPE 583

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA
Sbjct: 584 VLQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-SGEVLKVNMWRMLLCEAVA 642

Query: 568 SIINSGLNIIGVESPNEM 585
           +++  G +I+G++    M
Sbjct: 643 AVMAKGFDILGIKPVQRM 660


>gi|322378816|ref|ZP_08053242.1| arginyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148740|gb|EFX43214.1| arginyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 536

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 164/569 (28%), Positives = 287/569 (50%), Gaps = 40/569 (7%)

Query: 20  CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
            K  +E+ +   +++E P+D + GH ++  A  L++     P  IA  +V R+  D +  
Sbjct: 5   IKTLLERVLQTEVILEHPKDRSLGHYASVVAFPLAKVYKKPPKIIALELVDRLLEDEECQ 64

Query: 80  SVFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           +VF    A  G+IN  L  S+L +  +  +  G+++G+    K   + +EFVSANPTGP+
Sbjct: 65  AVFAKIEALNGYINFTLKESFLDRFCNQALKLGVDFGK-EADKNESLYLEFVSANPTGPL 123

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+ GD+  +L  F GY V  EYY+ND GAQI  L LS++    + + +   + 
Sbjct: 124 HIGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSLWLAICE-MQHLKVEY 182

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P  YY G Y+  + ++  + +    LN  +      + D++ + ++  I   L  L I  
Sbjct: 183 PTEYYRGAYINELAQKALEHFPD--LNNNDPNLYATLGDFAKEVVLAQIEQSLADLGIVI 240

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE    R   +   ++   L + G VYE                   +   +S+M 
Sbjct: 241 ENYASE----RAMFAHQEEVFKRLEQAGGVYEF----------------EGKRWLKSSMF 280

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           GD+ DR + K+DG +TY A D+ Y   K+++GFD+ I + G+DH GYV R++A    +  
Sbjct: 281 GDEKDRVIRKNDGDFTYIAGDITYHDYKFKQGFDHYINIFGADHHGYVARIKAALQFLGY 340

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +  ++ VLL ++V L ++G P KMSKRAG+ + L  V++++G D++RF+ L +K    L+
Sbjct: 341 EAQKLEVLLVQMVALLQNGKPYKMSKRAGNSVLLSDVLEDMGKDALRFVFLSKKLDTHLE 400

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD   +++Q   NP+FY+ YA AR  ++  +    F           +         S  
Sbjct: 401 FDIASLQKQDSSNPIFYIHYANARIHTMLEK----FFQKPNASLQAILSSSLENLPESGG 456

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+ +    P++++ A   +E  K+  YL  LA+ FH  ++  R           +    
Sbjct: 457 ALLFNALNLPKILQTAFQDRELQKICDYLKGLAADFHSFYNAYRIL---------DTPQE 507

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  L+L   V+  +  GL ++G+E+  +M
Sbjct: 508 LPYLKLCQMVSLSLTIGLKLLGIEAKRKM 536


>gi|269103063|ref|ZP_06155760.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162961|gb|EEZ41457.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 576

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 124/620 (20%), Positives = 235/620 (37%), Gaps = 79/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +    + V IAG GFIN++L+  +L       +            K 
Sbjct: 55  PREFAQKVIDNLDLGEMAEKVEIAGPGFINIFLNKQWLAARAEEALNDDRLSVAKE--KE 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L  +
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIAN 172

Query: 181 VFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +  + Q    +  N SDL   Y     L     E A+   + ++     +E      K  
Sbjct: 173 MVRKEQDGSDVSMNISDLEGFYRESKVLYDEDPEFAETARNYVVRLQSGDEYCHEKWKQL 232

Query: 237 SVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            V+  +K  + +   LN+    +  + E  ++   P     I+ +L  +G   E      
Sbjct: 233 -VEITLKQNQRNYDRLNVSLTDENVMGESMYNEMLPG----IVADLKEKGLAVE------ 281

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
                    +D  +        G+ +   + K DG Y Y   D+A  K +YE+   D ++
Sbjct: 282 -DDGAVVVFLDEYK-----NKDGEPMGVIIQKRDGGYLYTTTDIACAKYRYEKLHADRVL 335

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y + S    ++    ++          +++      + L +DG P K   RAG  + L  
Sbjct: 336 YFIDSRQHQHLMMAWSIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLAD 393

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++DE                           V   +V++  L +  +    FD+  +   
Sbjct: 394 LLDEAQERANKLIEEKNPELSAEEKAEIANTVAMAAVKYADLSKHRTTDYIFDWDNML-A 452

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+QYAY R  SIF++A     DL   +            D  E  L+  L ++
Sbjct: 453 FEGNTAPYMQYAYTRVASIFKRAGVELADLTHPII---------ITDEKEQALLSKLLQF 503

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              ++       P+ +  YL++LA  F   +           + A   ++   RL+L H 
Sbjct: 504 EEAVQTVAREGHPHVMCNYLFELAGTFSSFYEAC------PILNAE-EEVKQSRLKLAHL 556

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL+++G+++ + M
Sbjct: 557 TAKTIKQGLDLLGIKTLDRM 576


>gi|126176036|ref|YP_001052185.1| arginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166232839|sp|A3D9A3|SYR_SHEB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|125999241|gb|ABN63316.1| arginyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 581

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 131/615 (21%), Positives = 246/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  L+    +  V      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTLESFKQQGIVPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN +++ S L   L + V       +        V ++
Sbjct: 65  LIIDTLPASAYVAKVEIAGPGFINFFINDSALADQLQNAVNDEHLGIKLPT--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 KNGEKAQLELSDLENFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +    L +         E  ++    + +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHEVYARLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y  +DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEA----FR-NKEGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R+G  + L  +++E 
Sbjct: 346 RQALHFQQVFSLAKLAKFVREDMSLEHLGFGTMNGEDGRPFK--TRSGGVVKLVDLLEEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NVRALELVRSKNPDMDEATLTEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++        D DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRV------TDLDLSQAKIVLE----HEKEKDLGNKLAQFGEILS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N      RL L    A  +
Sbjct: 513 RVVDKGQPHVLCAYLYELAGAFSSFYEAC------PVLAADNDAQKNSRLLLAQLTARTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|114564914|ref|YP_752428.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122298448|sp|Q07WM5|SYR_SHEFN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114336207|gb|ABI73589.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 581

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 131/615 (21%), Positives = 244/615 (39%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  V      RI ++R +D +HG L+TN AM+L++    +P  +A+
Sbjct: 5   IESLLEQTIESFKQQGIVPADFQARIQVDRTKDKSHGDLATNLAMMLTKVAKKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  + L   L   + S        +     + ++
Sbjct: 65  LIIDTLPASSYVAKVEIAGPGFINFFIDDNALANQLQQALTSDHLG--VALPTKQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT---LALSVFW 183
           + S N    MHVGH R  ++GD++   + + G+ V R+ ++ D G Q      L   +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEYLGHNVIRQNHVGDWGTQFGMLLALMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
              +      SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 ANGEQAKMELSDLESFYRAAKVRFDESTEFATRARQLVVALQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    D  K L +         E  ++    + +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHDVYKRLGVSLTRADVHGESAYN----ADLAQVVKDLDAQGLLSE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y  +DLA  + +      D  +Y +  
Sbjct: 291 KVVFQEA----FR-NKEGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLKADRAMYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      + ++++       +   DG P K   R+G  + L  ++DE 
Sbjct: 346 RQALHFQQVFSLAKLAKFVRPEMSLEHTGFGTMNGEDGRPFK--TRSGGVVKLVDLLDEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F ++    + N 
Sbjct: 404 DVRALELVRSKNPDMDEATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    ++ +       E  L   LA++  V+ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDIDLSQAKIVLE----HEKEKDLGTKLAQFGEVLT 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             T    P+ L  YLY+LAS F   +           + A        RL L    A  +
Sbjct: 513 RMTDKGLPHVLCGYLYELASEFSSFYEAC------PVLAAETEAQKQSRLLLAQLTAKTL 566

Query: 571 NSGLNIIGVESPNEM 585
            +GL+++G+E+   M
Sbjct: 567 KTGLSLLGIETLERM 581


>gi|242309623|ref|ZP_04808778.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523624|gb|EEQ63490.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 521

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 156/553 (28%), Positives = 276/553 (49%), Gaps = 49/553 (8%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E+PRD   GH +       ++ L   P  IA+     ++   ++ S+ I   G++N +
Sbjct: 18  VLEQPRDKKFGHFAL-PTFSFAKTLKKSPQEIAQNFAKSLESLEEISSINI-INGYVNFF 75

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS  +L       +       +    K   + +E+VSANPTGP+H+GH R A+ GD+L+ 
Sbjct: 76  LSDKFLETCTKDFL-------KPYAPKKETILLEYVSANPTGPLHIGHARGAIFGDSLSR 128

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  + GY +  EYYINDAG QI  L  S+++  +        +LPEG Y G Y+  + K+
Sbjct: 129 IGKYLGYSIATEYYINDAGVQIENLGKSIYFAGRHLFLGESYELPEGCYKGEYILELAKD 188

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             + +  E+    +   +  +  +    M+  I+ +L  + I  D F+SE + +    S 
Sbjct: 189 AKESFGMEIFENADS--IAKLSLFGKDKMLDEIKSNLAEIGIFFDHFVSEKELYAQWDS- 245

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
               ++ L     +YE                   ++  +ST  GD+ DR +++ +G  T
Sbjct: 246 ---TLELLRANNGIYE----------------QEGKIWLKSTEFGDEKDRVIVRENGEPT 286

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y K K ER F+  I + G+DH GY+ R++A    +  + +++ +LL ++V L 
Sbjct: 287 YLAGDIIYHKNKMERNFNQYINIWGADHHGYIARVKAAIEFLGYESSKLEILLSQMVALL 346

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           + G   KMSKRAG+FI ++ VV++VG+D++R + L +K    L+FD   +K+Q   NPV+
Sbjct: 347 KGGEAYKMSKRAGNFILMKDVVEDVGADALRLIFLSKKADTHLEFDVEDLKKQDSSNPVY 406

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA+AR  ++F ++++   +   D               S   L+V      +V+E++
Sbjct: 407 YINYAHARIHTLFEKSQNSLDNFTKDFTN---------LSESLRDLLVLALNLSKVLEDS 457

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              + P K+  YL  LA  FH  ++        + +   N K  +  L +   VA  +N+
Sbjct: 458 FTQRNPQKVVEYLRTLAGEFHHFYNEE------KILNTPNEKQILSVLSI---VAQSLNA 508

Query: 573 GLNIIGVESPNEM 585
           GL ++G+++   M
Sbjct: 509 GLALLGIQAKKSM 521


>gi|163802523|ref|ZP_02196415.1| arginyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173606|gb|EDP58425.1| arginyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 577

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 128/619 (20%), Positives = 237/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS ++L K   + +            K 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEAFLAKQAEAALADSRLGV--TADKA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +Y E G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEEMGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPETVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELAAEEKQAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A     DL  ++            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASVFAKAGVSMDDLRGEI---------KVTDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDESVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|148826102|ref|YP_001290855.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229847101|ref|ZP_04467206.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166232791|sp|A5UCH1|SYR_HAEIE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148716262|gb|ABQ98472.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229809930|gb|EEP45651.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 577

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 236/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       ++ +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMVIAGADQSCDA------LVRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK      
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRAMWKRLVDITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 VED-DGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           +G  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF + +     L        +    +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNKTEINSTAL--------LAAPLTIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDEAVKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLELLGIKTVEKM 577


>gi|193216533|ref|YP_001999775.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|238692472|sp|B3PM19|SYR_MYCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193001856|gb|ACF07071.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 541

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 180/586 (30%), Positives = 293/586 (50%), Gaps = 57/586 (9%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L E   K++++K     I +  P+  ++G  STN A+ L + LG   + IA+ 
Sbjct: 5   KEIIIASLNEALEKLEIKKP----ITLTEPK--SYGDYSTNLALTLQKELGKPAIEIAKE 58

Query: 68  IVARIKIDPDVD--SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           IV  I +    +   V +A  GFIN ++S S L  +++SI      YG         VNI
Sbjct: 59  IVNAIDLKKHKEIVKVEVANPGFINFWVSNSVLSDLVNSINSLEDHYGDMSKEGKGAVNI 118

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EFVSANPTG +H+GH R A +G TL +++  +G+ V REYY+ND G Q+N LA SVF RY
Sbjct: 119 EFVSANPTGFLHIGHARNAAIGATLCNVLEKAGHRVVREYYVNDYGNQMNNLAASVFSRY 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKI 244
           QQ ++N D  +P+  Y G  +         KY  +  N    E+   + +D+  +  ++ 
Sbjct: 179 QQ-IFNKDFPMPDDAYKGHDMTIFADAFFKKYGDKYRNVAYTEEVKKLFRDFGREIALEN 237

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+ DL    +  D++ SE    + +   +  +I  L      YE                
Sbjct: 238 IKIDLGRFGVWFDLYTSET--QQYEKDRVWPVIRRLKS---TYE---------------- 276

Query: 305 DRKQLLFRSTMVG-DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD----NMIYVMGSD 359
                   +T  G DD DR ++K +G  TY  AD+AY + K+    D     +I + G+D
Sbjct: 277 KDGATWLNTTKGGNDDKDRVIIKGNGESTYMCADIAYHEQKFVELHDPEKGKIIDIWGAD 336

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           HSGYV+R++     +  ++ QI +LL +L+R+ ++G  IKMSKR G  +TLR ++D VG 
Sbjct: 337 HSGYVERIKFSFEDLGWRRDQIEILLFQLLRVVKNGKEIKMSKRLGTSLTLRELLDLVGK 396

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+VR+ ++ R  +  +DFD  KV++  + NP+F ++YA+ARC  +  +A+   P      
Sbjct: 397 DAVRYFLIERSYNSKIDFDINKVQKSDETNPLFLIKYAHARCYQLLEKAQIKNP------ 450

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                I    E D +  +L   L EYP +I+      +   L  YL  LA  F+  +S+ 
Sbjct: 451 -----IASNLENDFA-QKLTNELKEYPNLIDTMAKTYKVNLLPPYLLKLAGAFNSFYSNV 504

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       +  +  +     L LV A   ++ + + ++ ++ PN+M
Sbjct: 505 R-------ISGDPNE--QSYLALVKATKIVLANAMKLMDLDIPNKM 541


>gi|309751074|gb|ADO81058.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 577

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++   ++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQHEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q + +    ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQY----NYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLA 278

Query: 301 KCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDEAVKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|113477422|ref|YP_723483.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964531|sp|Q10XL4|SYR_TRIEI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110168470|gb|ABG53010.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 585

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 145/619 (23%), Positives = 241/619 (38%), Gaps = 77/619 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +LK+   +       +  +    +I    +   G    N AM L++ L   P  IA 
Sbjct: 4   IVEQLKSRFDKALITAFGQDLVGTDPMIVSTTNPKFGDYQCNVAMSLAKKLKDKPKAIAT 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  + I+       IAG GFINL L P Y+   L +I+    +   +      +V I+
Sbjct: 64  QIINNLNINDYFYPPEIAGPGFINLSLKPEYIENCLETIIKD-EKLNISPTKNPQRVVID 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   +   + 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGDWGTQFGMLISYLREAFP 182

Query: 187 QALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           +AL   D     DL   Y          ++  +K   E++N            ++ + + 
Sbjct: 183 EALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQTGAEDS---RHAWELLC 239

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R + + +    DI ++E      +   +  I++ L R G + E              
Sbjct: 240 NQSRREFQVIYDLLDIKLNERGESFYNS-MLPGIVEELNRLGLLEES------------- 285

Query: 303 DMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
             D  Q +F S      G+DV   + KSDG Y Y   DLA    + E+ G   +IYV  +
Sbjct: 286 --DGAQCVFLSGFTNKEGEDVPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTDA 343

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVL-LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + +  ++  VA         + ++ +   + L  DG   K+  R+G+ + L  ++DE 
Sbjct: 344 GQANHFSQVWQVAKKAGWIPENVEIVNVFFGLVLGEDGK--KLKTRSGETVRLIDLLDEA 401

Query: 417 ------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                         VG  +V++  L +       F F K+    
Sbjct: 402 INKARNDLEKRLKDEKRLESEEFIKNVAQVVGLSAVKYADLSQNRKSNYVFSFDKMLAL- 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YAY R + I R+ +  F  L  D        +    D  EL L  HL +  
Sbjct: 461 QGNTAPYLLYAYVRVQGISRKGEINFEKLRKDA-------KIILQDEPELVLGKHLLKLN 513

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+   TI   P +L  YLY+L+  F+  + +    P L+    +   L   RL L    
Sbjct: 514 EVLNIVTIELLPNRLCEYLYELSEKFNKFFENC---PVLK----SEEPLRTSRLLLCDLT 566

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL ++G+     M
Sbjct: 567 ARTLKLGLYLLGISVLERM 585


>gi|317010599|gb|ADU84346.1| arginyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 541

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 163/572 (28%), Positives = 285/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I +    
Sbjct: 4   LIKGVLEEILEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISMHAKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G +       K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVACKGYINFTLSLDFLERFTQKALELKEKFGSKLPSENSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + ++  +     L    EE  + ++  Y+   M+  I+D+L +L I
Sbjct: 184 TYPEVFYKGEYIIEIAQKARNDLEPSLFQENEETIIEVLSGYAKDLMLLEIKDNLDSLGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        +   L +   +YE                   ++  +S+
Sbjct: 244 HFDSYASEKEVFKHK----DAVFKTLEKANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D +YTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKNYTYLAGDIVYHNEKFKQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
               +++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSSKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++        +       +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------LQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P++IE +       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKIIEASFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|325997202|gb|ADZ49410.1| Arginyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 541

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 165/572 (28%), Positives = 282/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVACKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+ +L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L R   +YE                   ++  +S+
Sbjct: 244 HFDSYASEREIFKHK----DAVFERLERANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++                +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------WQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ +E++       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|327260697|ref|XP_003215170.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 663

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 138/621 (22%), Positives = 257/621 (41%), Gaps = 75/621 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS------RPLGL 59
           + +SRL++       K          + +   +    G    N+AM ++      +   +
Sbjct: 77  NINSRLQDIFGAA-IKAAYPDLENPPLAVTPSQQPKFGDYQCNSAMSITQMLLKTKEQKI 135

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IA+ I   I  +  ++ V IAG GFIN++L   ++ + LSS++V+G++     IG+
Sbjct: 136 SPREIADKIARNIPDNECIEKVEIAGPGFINVHLKKDFVSRQLSSLLVNGVQPP--AIGE 193

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +V ++F S N    MHVGH R  ++GD++  L  F GY+V R  ++ D G Q   L  
Sbjct: 194 RKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFVGYDVLRLNHLGDWGTQFGMLIA 253

Query: 180 SVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            +  ++   L       DL + +Y     +   +E   K + + +   + K    +K  +
Sbjct: 254 HLQDKFPDYLTVSPPIGDL-QAFYKESKRRFDTEEEFKKRAYQCVVLLQSKNPEFIK--A 310

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + +  + R + + +    DI + E    +++     + DI+  L  +G V         
Sbjct: 311 WKLICDVSRQEFQKIYDCLDISLVERGESYYQ---DMMPDIVKELEEKGVVQLD------ 361

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                    D ++++F   + G  +   ++KSDG +TY  +DLA  K +  E   D++IY
Sbjct: 362 ---------DGRKIVF---VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRLLEEKADSIIY 409

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ S  S +++ + A A  V     Q+  ++     +       K   R+GD + L  ++
Sbjct: 410 VVDSGQSVHLQTIFAAAQMVGWYDPQVTRVVHAPFGVVLGEDKKKFKTRSGDTVRLIDLL 469

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +E                             V    +++  L         F F K+ + 
Sbjct: 470 EEGLKRSMDKLKEKERDKVLTPEELKAAQTSVAFGCIKYSDLSHNRINDYIFSFDKMLD- 528

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
            + N   Y+ YA+ R RSI R A      +D           E   D   E +L   +  
Sbjct: 529 DRGNTAAYLLYAFTRIRSIARLA-----SIDEKTLQTAARTTEIILDHEKEWKLGRCILR 583

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P +I+        + L  YLY+LA+ F   +       + R       K+ M R+ L  
Sbjct: 584 FPEIIQKILDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQ-TGKIVKVNMWRMLLCE 642

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A A+++  G +I+G++   +M
Sbjct: 643 ATAAVMAKGFDILGIKPVQKM 663


>gi|262394871|ref|YP_003286725.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338465|gb|ACY52260.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 577

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 126/620 (20%), Positives = 235/620 (37%), Gaps = 78/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQADAALADERLGVAKE--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +    Q+   +    +DL   Y     L    +E A K  + ++     +E    + K  
Sbjct: 173 LERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKARNYVVKLQSGDEYCAEMWKKL 232

Query: 237 SVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               M++  R+    LN+    D  + E  ++      +  I+ +L  QG   E      
Sbjct: 233 VDVTMIQNQRN-YDRLNVSLTRDDVMGESMYN----DMLPKIVADLKEQGLAVE------ 281

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
                Q   +D  +        G+ +   + K DG + Y   D+A  K +YE    D ++
Sbjct: 282 -DDGAQVVFLDEYK-----NKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVL 335

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y + S    ++ +   +          +++      + L +DG P K   RAG  + L  
Sbjct: 336 YFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLAD 393

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++DE                           V   +V++  L +  +    FD+  +   
Sbjct: 394 LLDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNML-A 452

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+QYAY R  SIF +A      L  D+            D  E  LI  L ++
Sbjct: 453 FEGNTAPYMQYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQF 503

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++     +P+ +  YL++LA  F   +           + A +  +   RL+L   
Sbjct: 504 EEAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAAL 557

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  I  GL+++G+++   M
Sbjct: 558 TAKTIKQGLSLLGIDTLERM 577


>gi|84393465|ref|ZP_00992221.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375893|gb|EAP92784.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 577

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/619 (19%), Positives = 239/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKRLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D     V IAG GF+N++L  ++L +   + +            + 
Sbjct: 55  PREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDEAFLAQQADAALA--DSRLGVTAAEA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +     +   +    SDL + Y     L    +E A K    ++       L    +Y  
Sbjct: 173 LERIQAETGEVSMELSDLEQFYRESKKLYDEDEEFAVKARGYVVK------LQSGDEYCA 226

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   K++   +      +D         R + S  RD +   +   ++   I+   +++ 
Sbjct: 227 EMWKKLVDVTMVQNQRNYD---------RLNVSLTRDDVMGESMYNHMLSNIVSDLQTQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
             K + D  Q++F        GD +   + K DG + Y   D+A  K ++E  G D ++Y
Sbjct: 278 LAK-ESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRATQLIESKNPELAEDEKKTIANTVAMAAVKYADLSKHRTTDYVFDWENML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A      L+ D+            +  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGISMDSLEGDI---------KITEEKEKALIAKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDETVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+E+   M
Sbjct: 559 AKTIKQGLSLLGIETLERM 577


>gi|294660188|ref|NP_852794.2| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286868|sp|Q7NC67|SYR_MYCGA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|284811838|gb|AAP56362.2| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930254|gb|ADC30193.1| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 549

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 157/590 (26%), Positives = 293/590 (49%), Gaps = 49/590 (8%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    +++ + LK+++    VE       +I++ ++   G  S+N AM+LS+    +P 
Sbjct: 2   VFKKIKTQIDHALKQLNLPTDVEY------LIQQTKNIQFGDFSSNVAMVLSKRQNKNPQ 55

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I+ ++  +   + +  +  GFIN +LS      +L  +  +     +    +   
Sbjct: 56  EIAKQIIEQLNPNE-FEKITFSKPGFINFFLSNQDKLVVLKRLQETNYSVEKLPKEEQES 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +NIEFVSANPTG +H+GH R A  GD L++++   G+ VT+EY+IND G Q++  ALS  
Sbjct: 115 INIEFVSANPTGFLHLGHVRNAYTGDVLSNILRAVGHNVTKEYWINDLGNQVSLFALSTI 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKD 235
            RY Q L  N  +LP+  Y G     V +E+   + ++  +         + K    +  
Sbjct: 175 IRYLQELGINKYELPDDSYHGKEPIFVAEEMIKDFGNKYQDIKIEDNKIVDSKIANELTQ 234

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y    M+  I+ DL+++ ++ D++ SE   ++   + + ++++N   + ++YE       
Sbjct: 235 YCTNKMLHFIKQDLESIGVKMDVWTSEKVVYQ--SNTLTELLNN-QLKDHIYE------- 284

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        +  R+T  GDD DR ++K +   TY+  D+A    K++RGFD +I V
Sbjct: 285 ---------QDGAVWLRTTDGGDDKDRVIIKENKQPTYYGTDIANHYLKHKRGFDRLINV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++ R    A     KK +  V+L E+V+L +D   IK SKR G+ I++  +++
Sbjct: 336 WGADHFGHILRTAYAAELTGIKKGKFVVVLIEMVKLLKDNKEIKFSKRLGNAISIPDMLE 395

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +  D+ R+ ML +  +  +  D     ++   NPV+YVQYA+AR   +  +A+     +
Sbjct: 396 FLSKDASRWFMLNQSWTSGIRIDVDLTNKKDSSNPVYYVQYAHARIHKLLTKAE----HI 451

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D +    +++  +      E  ++ +LA +   + N     E  KL  ++Y L   FH  
Sbjct: 452 DLNKVNLSLLNSDV-----ERTMVNYLASFEHYVHNVATTYEVNKLLNFVYTLTQSFHSW 506

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++          +     ++   RL L  A+ ++IN  L++ G+E+  +M
Sbjct: 507 YNSHE-------ILNQKDEIKQTRLLLAKAIKNLINYLLSLFGIEAVEQM 549


>gi|237798091|ref|ZP_04586552.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020943|gb|EGI01000.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 578

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 237/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +    +     ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALALRLDAALADANLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESAEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +  K +++ H        + R +       +   +        ++   K+          
Sbjct: 231 ERFKDISLSHCQ----QTYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHNGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAETELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLEA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A +      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAESPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|145627706|ref|ZP_01783507.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979481|gb|EDJ89140.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 577

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRAMWKRLVDITMQQNQH----NYARLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRIGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|148828426|ref|YP_001293179.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166232792|sp|A5UJ40|SYR_HAEIG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148719668|gb|ABR00796.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 577

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 237/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++   ++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQHEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  I L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTIKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|53729104|ref|ZP_00134063.2| COG0018: Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 575

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 234/617 (37%), Gaps = 74/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +        +E       ++ +      G    N AM  ++ LG++
Sbjct: 1   MNIQQILSDKIKQAMIAAGADSNIEP------LVRQSGKPEFGDYQANGAMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+    ++   D + IAG GFIN++L+ ++L    S  + +     +      
Sbjct: 55  PREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLANQASEALQAVNFGIKTA--NP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   + F G +V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHASQMELSDLEAFYRA----------AKEHYDSDEVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + + H+     +++ R + +     +   +    +   I+   K+K   
Sbjct: 223 YCRTMWKKLVDITMHHNQ----ENYDRLNVTLSEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   ++F        GD +   + K DG + Y   D+A  K +YE    D ++   
Sbjct: 279 VED-DGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRVLVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++D
Sbjct: 338 DSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   SV++  L +  +    FD+  +    + 
Sbjct: 396 EAVERADKLISERSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A      L+ ++         +  +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNRAGIDVNGLNGEI---------NLTEDKERALAVKLLQFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P  L  YLY+LA  F   +           + A    +   RL L    A 
Sbjct: 506 LNGVAKDGMPNILCQYLYELAGAFSSFYEAC------PMLNAE-ENVKNSRLSLAALTAK 558

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 559 TLKQGLDLLGIKTIEKM 575


>gi|190149308|ref|YP_001967833.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250518|ref|ZP_07336715.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303251862|ref|ZP_07338033.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307244840|ref|ZP_07526939.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307247015|ref|ZP_07529069.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307249238|ref|ZP_07531235.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307251560|ref|ZP_07533467.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253794|ref|ZP_07535648.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256060|ref|ZP_07537848.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307258250|ref|ZP_07539993.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|307260491|ref|ZP_07542185.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307262621|ref|ZP_07544251.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189914439|gb|ACE60691.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|302649292|gb|EFL79477.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302650506|gb|EFL80665.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306854285|gb|EFM86491.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306856467|gb|EFM88616.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306858762|gb|EFM90821.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306861024|gb|EFM93030.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306863278|gb|EFM95218.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865482|gb|EFM97377.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306867710|gb|EFM99555.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306869803|gb|EFN01586.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306872044|gb|EFN03758.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 575

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 124/617 (20%), Positives = 234/617 (37%), Gaps = 74/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +        VE       ++ +      G    N AM  ++ LG++
Sbjct: 1   MNIQQILSDKIKQAMIAAGADSNVEP------LVRQSGKPEFGDYQANGAMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+    ++   D + IAG GFIN++L+ ++L    S  + +     +      
Sbjct: 55  PREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLANQASEALQAVNFGIKTA--NP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   + F G +V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENEHASQMELSDLEAFYRA----------AKEHYDSDEVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + + H+     +++ R + +     +   +    +   I+   K+K   
Sbjct: 223 YCRTMWKKLVDITMHHNQ----ENYDRLNVTLSEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   ++F        GD +   + K DG + Y   D+A  K +YE    D ++   
Sbjct: 279 VED-DGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRVLVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S  + ++++   +           ++      + L +DG P K   R+G  + L+ ++D
Sbjct: 338 DSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   SV++  L +  +    FD+  +    + 
Sbjct: 396 EAVERADKLISERSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +A      L+ ++         +  +  E  L V L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNRAGIDVNGLNGEI---------NLTEDKERALAVKLLQFEEA 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P  L  YLY+LA  F   +           + A    +   RL L    A 
Sbjct: 506 LNGVAKDGMPNILCQYLYELAGAFSSFYEAC------PMLNAE-ENVKNSRLSLAALTAK 558

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 559 TLKQGLDLLGIKTIEKM 575


>gi|261885571|ref|ZP_06009610.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 531

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/555 (29%), Positives = 287/555 (51%), Gaps = 41/555 (7%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
             ++E+P+D    H +T  A  L++     P  IA  +  + +     D   I   G++N
Sbjct: 16  DFILEKPKDKNLAHYATPFAFSLAKEFKKSPAIIASQLALKFENHELFDVFSI--NGYLN 73

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L   +L  + ++ +     +G         + IE++SANPTGP+H+GH R AV GDTL
Sbjct: 74  FKLKGEFLNSLANNALSLAESFGSKKPQSQKDIFIEYISANPTGPLHIGHVRGAVYGDTL 133

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A +  + G +V  EYYINDAG QI+ L +S+    ++AL+N +   P+ YY G Y++ + 
Sbjct: 134 ARVARYIGLDVFTEYYINDAGNQIDLLGISISLFAREALFNENVQYPDKYYRGEYIEDIA 193

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K    K+  ++  F +E     + ++    ++KII+ DL+ + I  + + SE   +    
Sbjct: 194 KLALGKFGKDI--FYDESRNLELAEFGKDEVLKIIKKDLQDVGIFIESWASEKSLY---- 247

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +   I  LA  G +YE                  +     STM+GDD DR +++SDG 
Sbjct: 248 DELEGTIKKLASSGQMYE----------------KDQTTYIASTMLGDDSDRVVIRSDGR 291

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            TY A D+ Y   K+++G+ + I + G+DH GY+ R++A    +   ++++ V+L ++V 
Sbjct: 292 PTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINFLGYDESRLEVILMQMVS 351

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L ++G P KMSKRAG  + +  ++ E+GSD++RF+ + + N+  L+FD  ++K++   NP
Sbjct: 352 LLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKANTSSLEFDIDELKKEDSSNP 411

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +FY+ YA+AR   +F +A  +  D+        V    S  D S   L+      P V+E
Sbjct: 412 IFYINYAHARVNQVFAKASKLPNDV--------VGADLSNLDESGKNLLFEALILPEVLE 463

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A  ++  +K+  YL  L++ FH  ++  R          N  +L    L+L   VA  I
Sbjct: 464 DAVTSRSLHKIPEYLKSLSASFHKFYNENRV-----VGSKNEDEL----LKLFSVVALSI 514

Query: 571 NSGLNIIGVESPNEM 585
              LN+IG+ + ++M
Sbjct: 515 KVALNLIGIIAKDKM 529


>gi|22298368|ref|NP_681615.1| arginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|34222744|sp|Q8DKN4|SYR_THEEB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22294547|dbj|BAC08377.1| arginyl-tRNA-synthetase [Thermosynechococcus elongatus BP-1]
          Length = 584

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 121/612 (19%), Positives = 235/612 (38%), Gaps = 76/612 (12%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           RL+  L+       +      + ++        G   +N  + L++ LG  P  +A+ +V
Sbjct: 11  RLRRALQAA-----LPLDTYPQPLLVPASQVKFGDYQSNVCLSLAKQLGKAPRELAQEVV 65

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             ++++     V IAG GF+N  L P +L   L +   S    G     +  +V ++F S
Sbjct: 66  PHLEVEDLCQPVEIAGPGFLNFRLKPEFLAATLQAARGSD-RLGIPPAREPRRVVVDFSS 124

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N    MHVGH R  ++GD +A ++ F G+ V R  ++ D G Q   L   +   Y  AL
Sbjct: 125 PNIAKEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGTQFGMLIAYLDEVYPDAL 184

Query: 190 YN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                 +  DL   Y           E   K  ++++   + +        + Q + +  
Sbjct: 185 TTANALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGEEQS---RRAWQLLCEQS 241

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R + + +    DI ++E      +P  +  +I++LA  G + E        +  +   ++
Sbjct: 242 RREFQKIYDLLDIQLTERGESFYNP-FLPAVIEDLAACGLLVE-------DQGAKVVFLE 293

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364
                  +   G      + KSDG Y Y   DLA  + + ++   D +IYV     S + 
Sbjct: 294 G-----FTNKEGQPQPLIIQKSDGGYNYATTDLAALRYRIDKDQADWIIYVTDVGQSTHF 348

Query: 365 KRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
            ++  VA         + +  +   + L  DG   ++  R+G+ I L  ++ E       
Sbjct: 349 AQVFQVAQRAGWVPPHVTLTHVPFGLVLGEDGK--RLKTRSGETIRLIDLLTEAIARSRA 406

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +G  +V++  L +  +    F + K+    + N   
Sbjct: 407 DLEQRLATEGRTESPEFIDTVARAIGIGAVKYADLSQNRNSNYVFSYDKMLSL-QGNTAP 465

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R + + R+        D D    +        D +E  L  HL +    ++  
Sbjct: 466 YLLYAYVRVQGLTRRG-------DIDWCTLSPDSPLLLEDETEQHLAKHLVQLEETLDLV 518

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +    P +L  YL++L+ +F+  +           + +  +     RL L +  A  +  
Sbjct: 519 STELLPNRLCQYLFELSQLFNQFYDRC-------PILSAPQPTKQSRLTLAYLTAQTLKL 571

Query: 573 GLNIIGVESPNE 584
           GL+++G+   + 
Sbjct: 572 GLSLLGIPVLDR 583


>gi|90580068|ref|ZP_01235876.1| arginyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438953|gb|EAS64136.1| arginyl-tRNA synthetase [Vibrio angustum S14]
          Length = 576

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 122/619 (19%), Positives = 240/619 (38%), Gaps = 77/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++D   + V IAG GFIN++L+ ++L +     +    E         
Sbjct: 55  PREFAQKVIDCLELDGIAEKVEIAGPGFINIFLNKAWLAERGEEALKD--ERLAVNTETA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L  +
Sbjct: 113 QNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIAN 172

Query: 181 VFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +  + Q+   +  + SDL   Y     L    +E      + ++     +E  L   K  
Sbjct: 173 MQRKEQEGTDVSMDISDLEGFYRESKVLYDEDEEFGKTARNFVVRLQSGDEYCLEKWKQL 232

Query: 237 SVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               + +  R+ D  ++++  D  + E  ++   P     ++ +L  +G   E       
Sbjct: 233 VAITLKQNQRNYDRLSVSLTDDNVMGESMYNDMLPG----VVADLKEKGLAVE------- 281

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           S       +D  +        G+ +   + K DG Y Y   D+A  K +YE+   D ++Y
Sbjct: 282 SDGAIVVYLDEYK-----NKDGEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++     +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMMAWEIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAVERANKLIEEKNPELSTEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF++A     DL   +            D  E  L+  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFKRANVELVDLTHPIV---------ITDEKEQALLSKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA +F   +           + A    +   RL+L    
Sbjct: 505 EAVQSVAREGQPHLMCTYLFELAGMFSSFYEAC------PILNAE-EAVKQSRLKLALLT 557

Query: 567 ASIINSGLNIIGVESPNEM 585
           +  I  GL+++G+E+   M
Sbjct: 558 SKTIKQGLDLLGIETLERM 576


>gi|225550759|ref|ZP_03771708.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379913|gb|EEH02275.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 548

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 168/594 (28%), Positives = 295/594 (49%), Gaps = 56/594 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S +L   L+++            ++++++ ++   G   TN AM LS+ +   
Sbjct: 1   MMITQKISEQLSKALEKMGI-------FETKVLVDKTKNIKFGDFYTNVAMTLSKRVNQS 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            L +A+ I+  +  D     V +   GF+N  L       +L+ I      +G     K 
Sbjct: 54  SLVVAKEIINNLDQD-LFFKVNLQPPGFLNFTLKAKDHEDLLTQIYDQKDLFG-QFAKKN 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
              N+E+VSANPTG +H+ H   A+ GD LA+L+   GY+V  EY+INDAG QI+ LA+S
Sbjct: 112 ITYNVEYVSANPTGYLHIAHAANAIYGDILANLLKIYGYDVKTEYWINDAGNQIDKLAMS 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------- 232
           V  RY Q L N + +LP   Y G  +  V + L + Y  + +N    +   I        
Sbjct: 172 VLVRYLQ-LQNINIELPTDAYHGQEIYLVAQALYEIYKDQFINVRLNEKEEIDDVIVNEQ 230

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +K ++V  ++  I+ DL ++N   D + SE+         I +++  + +  Y  +G   
Sbjct: 231 IKKFAVSYLLDEIKKDLASINTYIDTYTSENWI--RSSGRILEVLSKIKQHTYTLDG--- 285

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                           L  R+T  GDD DR L+KSDGSYTYF  D+AY   K+ +     
Sbjct: 286 ---------------ALWLRTTAFGDDKDRVLIKSDGSYTYFTPDIAYHDYKFSKDNTTK 330

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I V G+DH GY+ RL+A  +A+      + ++  ++++L ++    K+SKR+G  +T++
Sbjct: 331 LIDVWGTDHLGYIARLKAAMSALGYDPNNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIK 390

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +V+ +G D++R+ +     +  +  D      ++  NP++YVQYA+AR   +  +    
Sbjct: 391 DLVEIIGKDALRWFLGSSSMNSHVVIDVDIALSKNNNNPLYYVQYAHARANQVLNK---Q 447

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             + DF          +   +T E +L+  L  Y + I NA   +EP++++ YLYDLA +
Sbjct: 448 VYEFDF--------KTDLLIETRERELLNQLHFYKQTIANAANNREPHRISNYLYDLAQI 499

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           FH ++++      ++    NN+ L+  R  LV  V  ++ +GL I+ +   ++M
Sbjct: 500 FHNYYAN------IKINDENNKALSAQRYTLVWCVKQVLANGLAIMKITPYDQM 547


>gi|269967949|ref|ZP_06181989.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269827472|gb|EEZ81766.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 577

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 234/619 (37%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADSRLGVAAD--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E  +F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEDFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K + 
Sbjct: 222 DEYCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPKIVADLKEQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE    D ++Y
Sbjct: 278 LAVED-DGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A      L  D+            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|261252368|ref|ZP_05944941.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935759|gb|EEX91748.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 577

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 125/633 (19%), Positives = 232/633 (36%), Gaps = 104/633 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ++       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLEGIASKTEIAGPGFINIFLSEEFLAKQADAALADARLGV--TAEEQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L   
Sbjct: 113 KTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 179 -----------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                            L  F+R  + LY+ D +        V     G E         
Sbjct: 173 LERVQKESGEVSMELSDLEAFYRESKKLYDEDEEFAVRARNYVVKLQSGDEYCA------ 226

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                E W  +V    VQ      R     +++  D  + E  ++   P     I+ +L 
Sbjct: 227 -----EMWKKLVDVTMVQNQRNYDRL---NVSLTRDDVMGESMYNDMLPG----IVADLK 274

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           +QG   E           Q   ++  +        G+ +   + K DG + Y   D+A  
Sbjct: 275 QQGLAQE-------DDGAQVVFLEEYK-----NKDGEAMGVIIQKRDGGFLYTTTDIACA 322

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIK 399
           K +YE  G D ++Y + S    ++ +   +         ++++      + L +DG P K
Sbjct: 323 KYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVSLEHHAFGMMLGKDGRPFK 382

Query: 400 MSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNS 432
              RAG  + L  ++DE                           V   +V++  L +  +
Sbjct: 383 --TRAGGTVRLADLLDEAEERATKLIESKNPSLDAEEKSNIANTVAMAAVKYADLSKHRT 440

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD+  +    + N   Y+QYAY R  SIF +A     +L  ++            +
Sbjct: 441 TDYVFDWDNML-AFEGNTAPYMQYAYTRVSSIFAKAGISMDNLAGEI---------KVTE 490

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  L ++   +++     +P+ +  YL++LA  F   +           +   +
Sbjct: 491 EKEKALIAKLLQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILNTED 544

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL+L    A  I  GL+++G+E+   M
Sbjct: 545 ESVKQSRLKLAALTAKTIKQGLSLLGIETLERM 577


>gi|251789870|ref|YP_003004591.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538491|gb|ACT07112.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 576

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 234/617 (37%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E       ++ +      G    N  M  ++ LG+ 
Sbjct: 1   MNIQALLSEKVHQAMIAAGAPADSEA------MVRQSAKAQFGDYQANGIMAAAKKLGMS 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE +V  +++D       IAG GFIN++L   +L   L   + +       L  + 
Sbjct: 55  PRQLAEKVVQTLQLDGIAAKTEIAGPGFINIFLDSHWLSAQLEHALAAPNLG--ILPVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVG+ R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHRVIRANHVGDWGTQFGMLIAH 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +      +  + +    E +Y            A K   E   F E     +VK  S   
Sbjct: 173 LEDVQNGSASDLELADLEAFYRE----------AKKQYDEDAAFAERARGYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++  + R + S   + +   +    +   I+   K+K   
Sbjct: 223 YCRSMWRKL----VDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
           + + +   +++        G+ +   + K DG Y Y   D+A  K +YE+ G D ++Y +
Sbjct: 279 E-ESEGAIVVYLDEYKNKEGEAMGVIVQKKDGGYLYTTTDIACAKYRYEKLGADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  ++          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWSIVRKAGYVPESVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 396 EAYERALALIAGKNPEMDRTELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A      L   +               E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVSSIFKRAGVEESSLTQPIA---------LTAEHEQALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + +         + A++      RL+L    A 
Sbjct: 506 VTTVARDGTPHVMCAYLYDLAGLFSGFYENC------PILNADSENTRQSRLKLARLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+ +G+++  +M
Sbjct: 560 TLKTGLDTLGIQTVEKM 576


>gi|326567939|gb|EGE18036.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 575

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 125/619 (20%), Positives = 233/619 (37%), Gaps = 78/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ +  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISRHANQANIS--RTLGVNTAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYS 237
           +       + + D SDL   Y    +     +  A K  + ++     +E  L + +   
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKL- 231

Query: 238 VQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           V   M   +     LN+    D  + E  ++   PS    I+  L  +G   E       
Sbjct: 232 VDITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE------- 280

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
                   +D       +   GD +   + K DG Y Y   D+A    +Y     D +I 
Sbjct: 281 DDGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVIL 335

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              +  + + ++   +         +  +      + L +DG P K   R G  + L  +
Sbjct: 336 FTDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADL 393

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 394 LDEAIERATTLIKQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF- 452

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++ 
Sbjct: 453 EGNTAPYMQYAYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQFE 503

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+        P+ L  YL++LA +F   +           + +++ K    RL+L    
Sbjct: 504 EVLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALT 556

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL ++G+++  +M
Sbjct: 557 AKTLKQGLQLLGIKTVEKM 575


>gi|170717675|ref|YP_001784750.1| arginyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083536|sp|B0UUF1|SYR_HAES2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|168825804|gb|ACA31175.1| arginyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 577

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 117/617 (18%), Positives = 241/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S+++K  +++     + +       +++       G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSNKIKQAMRQAGADEQCDA------LVKPSSKPQFGDYQANGIMATAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  I +    + + IAG GFIN++L  ++L + +   +          + + 
Sbjct: 55  PRDFAQKVLDLIDLKNIAEKMEIAGPGFINIFLDKNWLAENIQVTLQDKKLGV--TVEEI 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  +  A
Sbjct: 173 LEKMENEHASAMELADLEAFYRA----------AKEHYDNDETFAEKARNYVVKLQNGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +  ++ +   +    +   I+   K++   
Sbjct: 223 YCRTMWKKLVDITMQQNQ----RNYDRLNVTLTQNDVMGESLYNPMLPEIVADLKAQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D +  Q+++        GD +   + K DG + Y   D+A  K +Y     D  +   
Sbjct: 279 VED-EGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYHTLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +            +      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFK--TRSGGTVKLTDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERADKLISEKSTALSSKEKAAVIEAVGIGSVKYADLSKNRTTDYVFDWDIMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +      D+  +      I      D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-----TDISEEQLHPAKI---QLTDEKERLLAIKLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         +  +N  + + RL+L      
Sbjct: 507 VQIVGKEGTPHILCAYLYELAGLFSSFYEHC------PILNNDNENVKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 561 TLKQGLDLLGIKTVEKM 577


>gi|307130871|ref|YP_003882887.1| arginyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528400|gb|ADM98330.1| arginyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 576

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 237/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   +         E       ++ +      G    N  M  ++ LG+ 
Sbjct: 1   MNIQALLSEKVHQAMIAAGAPADSEA------MVRQSAKAQFGDYQANGIMAAAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  +++D       IAG GFIN++L+P +L   L   + +          + 
Sbjct: 55  PRQLAEKVLQTLQLDGIAAKTEIAGPGFINIFLAPQWLSGQLEHALTAPKLGV--SAVEP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVG+ R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGNLRSTIIGDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAH 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +     N SDL        Y +      A K+  +   F E     +VK  S   
Sbjct: 173 L----EDVQNGNTSDLELADLEAFYRE------AKKHYDDDAVFAERARGYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L    +   +  ++  + R + S   + +   +    +   I+   K+K   
Sbjct: 223 YCRSMWRKL----VDITMVQNQRSYDRLNVSLTPNDVMGESLYNAMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   +++        G+ +   + K DG Y Y   D+A  K +YE+ G   ++Y +
Sbjct: 279 -VESEGAIVVYLDEYKNKEGEAMGVIIQKKDGGYLYTTTDIACAKYRYEKLGASRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  ++          +++      + L +DG P K   RAG  I L  ++D
Sbjct: 338 DSRQHQHLMQAWSIVRKAGYVPESVSLEHHMFGMMLGKDGKPFK--TRAGGTIKLSELLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 396 EAYERALTLIAGKNPEMERGELEQLAQVVSVGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  SIF++A          +   ++    +     E  L   L ++   
Sbjct: 455 NTAPYMQYAYTRVSSIFKRAG---------VEEASLTQPITLTAEHEQALATRLLQFEET 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYDLA +F G + +         + A+N      RL+L    A 
Sbjct: 506 VTTVARDGTPHVMCAYLYDLAGLFSGFYENC------PILNADNDGTRQSRLKLALLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            + +GLN +G+++  +M
Sbjct: 560 TLKTGLNTLGIQTVEKM 576


>gi|54308257|ref|YP_129277.1| arginyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400047|sp|Q6LTA1|SYR_PHOPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46912685|emb|CAG19475.1| putative arginyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 576

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 126/633 (19%), Positives = 237/633 (37%), Gaps = 105/633 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKIQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D   + V IAG GFIN++L  S+L       +            K 
Sbjct: 55  PREFAQKVIDVLDLDGIAEKVEIAGPGFINIFLDKSWLAARAEEALTDDRIGV--AAEKQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  +
Sbjct: 113 QNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVVRANHIGDWGTQFGMLIAN 172

Query: 181 V-------------------FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           +                   F+R  + LY+ D +        V     G E   +   +L
Sbjct: 173 LERVQNETGEVSMELADLEGFYRESKKLYDEDEEFAVRARAFVVKLQSGDEYCAEMWKKL 232

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           ++              V  +   I  D   +++  D  + E  ++   P     I+ +L 
Sbjct: 233 VD--------------VTMVQNQINYDRLNVSLTRDNVMGESMYNYMLPG----IVADLK 274

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G   E       S   Q   +D  +        GD +   + K DG + Y   D+A  
Sbjct: 275 EKGLAVE-------SDGAQVVFLDEYK-----NKDGDPMGVIIQKRDGGFLYTTTDIACA 322

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIK 399
           K ++E+   D ++Y + S    ++ +  ++         ++ +      + L +DG P K
Sbjct: 323 KYRFEQLNADRVLYFIDSRQHQHLMQAWSIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFK 382

Query: 400 MSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNS 432
              RAG  + L  ++DE                           V   +V++  L +  +
Sbjct: 383 --TRAGGTVRLADLLDESEVRAAKLIEAKNPDLDTAEKDKIAKTVAMAAVKYADLSKHRT 440

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD+  +    + N   Y+QYAY R  SIF++A     D++       ++      D
Sbjct: 441 TDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----DVNLADLTHPIVIN----D 490

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L+  L ++   + N +   +P+ +  YL++LA  F   +           + A  
Sbjct: 491 EKEQALLSTLLQFEEAVLNVSREGQPHLMCTYLFELAGKFSSFYEAC------PILNAE- 543

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL+L    A  I  GL+++G+E+   M
Sbjct: 544 EAVKQSRLKLALLTAKTIKQGLDLLGIETLERM 576


>gi|120600411|ref|YP_964985.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166232844|sp|A1RP36|SYR_SHESW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120560504|gb|ABM26431.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 581

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 128/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN +++ S L   L + V       +        V ++
Sbjct: 65  LIIDTLPASAFVAKVEIAGPGFINFFINDSALADQLQNAVNDEHLGIKLPT--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +  +   SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 KNGEQAHLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +    L +         E  ++    + +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHEVYARLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y  +DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEA----FR-NKEGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R+G  + L  +++E 
Sbjct: 346 RQALHFQQVFSLAKLAKFVREDMSLEHLGFGTMNGEDGRPFK--TRSGGVVKLVDLLEEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NVRALELVRSKNPDMDEETLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++          DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRV------TGLDLSQAKIVLE----HEKEKDLGNKLAQFGEILN 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    A  +
Sbjct: 513 RVVDKGQPHVLCAYLYELAGAFSSFYEAC------PVLAADNDEQKNSRLLLSQLTARTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|189054553|dbj|BAG37326.1| unnamed protein product [Homo sapiens]
          Length = 660

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 131/624 (20%), Positives = 261/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKNRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V  G   
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVG--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|319776477|ref|YP_004138965.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123983|ref|ZP_08252530.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317451068|emb|CBY87301.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327467408|gb|EGF12906.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 577

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 238/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  +  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIIAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        G+ +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKDGNPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERSTVLINEKNTNLSNDEKEAVIKAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|145637830|ref|ZP_01793478.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145268973|gb|EDK08928.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 577

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 236/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGSDQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++   ++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQHEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 VED-DGALVVYLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|13357838|ref|NP_078112.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761964|ref|YP_001752362.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920258|ref|ZP_02691286.2| arginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508719|ref|ZP_02958202.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701953|ref|ZP_02971591.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|38258402|sp|Q9PQL3|SYR_UREPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083554|sp|B1AIR8|SYR_UREP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|11271728|pir||B82912 arginyl tRNA synthetase UU278 [imported] - Ureaplasma urealyticum
 gi|6899250|gb|AAF30687.1|AE002124_9 arginyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827541|gb|ACA32803.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902661|gb|EDT48950.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675642|gb|EDT87547.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700707|gb|EDU18989.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 550

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 170/588 (28%), Positives = 296/588 (50%), Gaps = 49/588 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + ++   L +   K+ +      +I++++ ++   G   TN AMILS+      L IA+
Sbjct: 2   ITQKISEELNKALAKMGIHDTQETKILVDKTKNIKFGDFYTNIAMILSKKNNKSSLEIAK 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I    + D  ++ V +   GF+N  L       +L  I      +G     K    NIE
Sbjct: 62  EIANNFEQDLFLE-VNLQPPGFLNFKLKAKDHENLLKQIYYEKDRFG-QFSKKNITYNIE 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +VSANPTG +H+ H   A+ GD LA+L+   GY+V  EY+INDAG QI+ LA+SV  RY 
Sbjct: 120 YVSANPTGYLHIAHAANAIYGDILANLLKIYGYDVETEYWINDAGNQIDKLAMSVLVRYL 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEEKWLPIVKDYSV 238
           Q L N +  LP   Y G  +  V + L   Y ++ +N          ++     +K+++V
Sbjct: 180 Q-LQNINIQLPADAYHGQEIHLVAQTLYQTYKNQFINVRLNEKYEIDDDIANQEIKNFAV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + ++  I++DL ++N   D + SE+     +   I +++  +    Y  +G         
Sbjct: 239 KYLLNEIKNDLASINTFIDTYTSENWI--RNSGRILEVLSKIKPYTYTLDG--------- 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
                     L  ++T  GDD DR L+KSDGSYTYF  D+AY   K+ +     +I V G
Sbjct: 288 ---------ALWLKTTTFGDDKDRVLIKSDGSYTYFTPDIAYHDYKFNKTNTTKLIDVWG 338

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ RL+A   A+      + ++  ++++L ++    K+SKR+G  +T++ +V+ +
Sbjct: 339 TDHLGYIARLKAAMNALGYDPNNLEIVCAQVMKLVKNNQEFKLSKRSGQSLTIKDLVEII 398

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G D++R+ +     +  +  D      ++  NP++YVQYA+AR   +  +      +LDF
Sbjct: 399 GKDALRWFLGSSSMNSHVIIDVDIALSKNNNNPLYYVQYAHARANQVLNK---QVYELDF 455

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                     +   +T E +L+  L  Y + I NA   +EP++++ YLYDLA +FH +++
Sbjct: 456 --------KTDLLTETRERELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYA 507

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + N        NN+ L+  R  LV  V  ++ +GL I+ +   ++M
Sbjct: 508 NVKIN------NDNNKVLSAQRYTLVWCVKQVLANGLAIMKITPYDQM 549


>gi|269114834|ref|YP_003302597.1| Arginyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322459|emb|CAX37194.1| Arginyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 543

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/592 (28%), Positives = 289/592 (48%), Gaps = 56/592 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +   L E   K+ + K     IV+   ++  +G  S+N A+ L + LG  
Sbjct: 1   MNM-KTTKDIIIASLNEALEKLNISKP----IVLTESKN--YGDYSSNIALTLQKDLGKK 53

Query: 61  PLTIAELIVARIKIDPDVD--SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            + IA+ IV  I ++   +   + +A  GFIN ++S S +   ++ I   G  YG     
Sbjct: 54  AIDIAQEIVRNIDLNKFKEISEIKVAEPGFINFWVSNSVIANTINQINNEGSTYGSIDPK 113

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
               +N+EFVSANPTG +H+GH R A +G TL +++  +G+ V REY +ND G Q+N +A
Sbjct: 114 GKGAINVEFVSANPTGYLHIGHARNAAIGATLCNILEKAGHRVVREYLVNDYGNQMNKMA 173

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYS 237
            S+F RYQQ ++N +  +PE  Y G  +    +   + +  E  N    ++   I + + 
Sbjct: 174 DSIFARYQQ-IFNPEFPMPEDSYHGGDMIEFAQAFYNIHKDEYKNVEYTDEIRKIFRSFG 232

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +K I +D+K   +  DIF SE + +  +   +   I  L                 
Sbjct: 233 RDFALKNIIEDMKKFGVTFDIFTSEAEQYAKN--RVWPAIHRLK---------------- 274

Query: 298 TTQKCDMDRKQLLFRSTMVG-DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD---NMI 353
                          +T  G DD DR ++KS+G  TYF AD+AY + K     D    ++
Sbjct: 275 ---TTYKKDGATWLETTKGGKDDKDRVIIKSNGDSTYFCADIAYHEQKLLELNDPNGKIV 331

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G+DHSGYV+R++     +  ++ QI +LL +L+R+ ++G  +KMSKR G  +TLR +
Sbjct: 332 DIWGADHSGYVERVKFSFEDLGHRRDQIEILLFQLIRIMKNGKEVKMSKRLGTSLTLREL 391

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            +EVG+D++R+ ++ R  +  +DFD  KV + ++ NP++ ++YA+AR   +  +     P
Sbjct: 392 AEEVGNDAIRYFLIDRSYNSRIDFDINKVTDNNENNPMYIIKYAHARACQLLDKVGIENP 451

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                      I  +   +    +L+  L EYP +I       +   L  YL  L+  F+
Sbjct: 452 -----------IASDELDNEYAQKLVAELKEYPELISTMAKTYKVNLLPPYLLKLSKAFN 500

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +S+ +       V  +  + ++    LV A   ++  GL ++ +E+P +M
Sbjct: 501 SFYSNTK-------VLGSPNEQSLA--ALVKATKIVLADGLKLMDIEAPEKM 543


>gi|91228441|ref|ZP_01262366.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188025|gb|EAS74332.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 577

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 235/619 (37%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++ + L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSHALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADSRLGVAAD--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E  +F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEDFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K + 
Sbjct: 222 DEYCAEMWKKLVDVTMIQNQ----RNYDRLNVSLTRDDVMGESMYNDMLPKIVADLKEQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE    D ++Y
Sbjct: 278 LAVED-DGAQVVFLDEYKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A      L  D+            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|269960720|ref|ZP_06175092.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834797|gb|EEZ88884.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 577

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 236/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALTDSRLGVAAD--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A     DL  ++            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|254506840|ref|ZP_05118979.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550125|gb|EED27111.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 605

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 120/612 (19%), Positives = 233/612 (38%), Gaps = 68/612 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  + + + + +              +   +      G    N  M +++ LG +P   A
Sbjct: 30  NIQALINDKVSQALEAAGAPAGSPAAVR--QSAKPQFGDYQANGVMGVAKKLGTNPREFA 87

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + ++  + +D       IAG GFIN++LS  +L K   S +            +   +  
Sbjct: 88  QKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAESALADARLGVAKE--EQQTIVA 145

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++  R 
Sbjct: 146 DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL-ERV 204

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           Q+       +L +               + K   E   F       +VK  S       +
Sbjct: 205 QKESGEVSMELSD--------LEAFYRESKKLYDEDEEFALRARNYVVKLQSGDEYCAEM 256

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              L    +   +  ++ ++ R + S  RD +   +    +  GI+   K +   + D D
Sbjct: 257 WKKL----VDVTMVQNQRNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKERGIAQED-D 311

Query: 306 RKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             Q++F        G+ +   + K DG + Y   D+A  K +YE  G + ++Y + S   
Sbjct: 312 GAQVVFLEEYKNKDGEAMGVIIQKRDGGFLYTTTDIACAKYRYETLGANRVLYFIDSRQH 371

Query: 362 GYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            ++ +   +         ++++      + L +DG P K   RAG  + L  ++DE    
Sbjct: 372 QHLMQAWTIVRKAGYVPEEVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDEAEER 429

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  V   +V++  L +  +    FD+  +    + N   Y
Sbjct: 430 AIKLIESKNADLDSEEKVKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 488

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  SIF +A     +L  ++            +  E  LI  L ++   +++  
Sbjct: 489 MQYAYTRVSSIFAKAGISMDNLAGEI---------KVTEEKEKALIAKLLQFEEAVQSVA 539

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P+ +  YL++LA  F   +           +   +  +   RL+L    A  I  G
Sbjct: 540 REGQPHIMCSYLFELAGQFSSFYEAC------PILNTEDESVKQSRLKLAALTAKTIKQG 593

Query: 574 LNIIGVESPNEM 585
           L+++G+E+   M
Sbjct: 594 LSLLGIETLERM 605


>gi|224436874|ref|ZP_03657863.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143352|ref|ZP_07805545.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128383|gb|EFR46000.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 534

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 164/532 (30%), Positives = 272/532 (51%), Gaps = 36/532 (6%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             +K  L +  C ++ E      IV+E+P++   GHL+T  A  L++    +P  +AE +
Sbjct: 3   QHIKAILAQA-CGLENE----SEIVLEKPKNKDLGHLATPLAFSLAKIKRQNPKLLAEEL 57

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +  +P    V  A  GFINL LS  +L       +                + +EFV
Sbjct: 58  SVSLAQNPAFSKVE-ALNGFINLTLSADFLFD-----ISKAESTAPQSKQNKESILLEFV 111

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTGP+H+GH R AV GD L+ +    GYE+T EYYINDAG+QI  L LS+    Q+ 
Sbjct: 112 SANPTGPLHIGHARGAVYGDVLSRVGRHLGYEITTEYYINDAGSQIQMLGLSLLLAGQEH 171

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   +   PE YY G Y+  + KE    +   +  F  E  +P + D+   AM++ I+D+
Sbjct: 172 ILKREVKYPESYYRGEYIVDLAKECEKHFGKSI--FESEDSIPALADFGKNAMLQEIKDN 229

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  + I  D F+SE   +    S     +  L +   +Y                    +
Sbjct: 230 LLQVGISFDNFVSEKALYERWNS----TLQTLKQNNGIY----------------TQDSK 269

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   S+ + D+ DR +++  G  TY A D+ Y + K++RGF+  I + G+DH GY++R++
Sbjct: 270 VWIASSKLNDEKDRVIVRESGEPTYLAGDIIYHQDKFQRGFERYINIWGADHHGYIQRVK 329

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A    +   + ++ VLL ++V L + G P KMSKRAG+FI ++ V  E+GSD++RF+ L 
Sbjct: 330 AAIHFLGYDENKLEVLLSQMVSLLKGGQPYKMSKRAGNFILMKDVASEIGSDALRFIFLS 389

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +K    L+FD  ++K+Q   NP++Y+ YA AR  ++F +A     DL+ ++     +  +
Sbjct: 390 KKPDTHLEFDVDELKKQDSSNPIYYINYANARIHTLFEKAGVNMQDLEKNIQS---LSFD 446

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           S    S   L+        ++E++   +E  K+  YL +LA+  H  ++  +
Sbjct: 447 SHIKDSATHLLFESLCLSHILESSFRDREMQKICEYLKNLAASLHSFYNTHK 498


>gi|156973665|ref|YP_001444572.1| arginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166200586|sp|A7MT26|SYR_VIBHB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|156525259|gb|ABU70345.1| hypothetical protein VIBHAR_01368 [Vibrio harveyi ATCC BAA-1116]
          Length = 577

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 236/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADSRLGVAAD--EA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  R QQ       +L   EG+Y              K   E   F  +    +VK  S 
Sbjct: 173 L-ERVQQESGEVSMELADLEGFYRES----------KKLYDEDEEFAVKARNYVVKLQSG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +   L  + +  +      ++ R + S  RD +   +    +   I+   K++ 
Sbjct: 222 DEFCAEMWKKLVDVTMIQNQ----RNYDRLNVSLSRDDVMGESMYNDMLPKIVADLKAQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y
Sbjct: 278 LAVED-DGAQVVFLEEFKNKDGEAMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRAAQLIESKNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  S+F +A     DL  ++            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDEAVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+++   M
Sbjct: 559 AKTIKQGLSLLGIDTLERM 577


>gi|86147649|ref|ZP_01065958.1| arginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218710198|ref|YP_002417819.1| arginyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782991|sp|B7VI24|SYR_VIBSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85834560|gb|EAQ52709.1| arginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218323217|emb|CAV19394.1| Arginyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 577

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 122/619 (19%), Positives = 239/619 (38%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGIMGVAKRLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D     V IAG GF+N++L  ++L +   + +            + 
Sbjct: 55  PREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDETFLAQQADAALA--DSRLGVSAAEA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +     +   +    SDL + Y     L    +E A K               +VK    
Sbjct: 173 LERIQAETGEVSMELSDLEQFYRESKKLYDEDEEFAVK-----------ARGYVVKLQGG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A    +   L    +   +  ++ ++ R + S  RD +   +   ++   I+   +++ 
Sbjct: 222 DAYCAEMWKKL----VDVTMVQNQRNYDRLNVSLTRDDVMGESMYNHMLSNIVSDLQTQG 277

Query: 299 TQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
             K + D  Q++F        GD +   + K DG + Y   D+A  K ++E  G D ++Y
Sbjct: 278 LAK-ESDGAQVVFLDEYKNKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELGADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEVRATQLIESKNPELAEDEKKTIANTVAMAAVKYADLSKHRTTDYVFDWENML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A      L+ ++            +  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAGISMDSLEGEI---------KITEEKEKALIAKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA  F   +           + A +  +   RL+L    
Sbjct: 505 EAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC------PILVAEDETVKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+E+   M
Sbjct: 559 AKTIKQGLSLLGIETLERM 577


>gi|89073534|ref|ZP_01160057.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050798|gb|EAR56279.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 576

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/619 (19%), Positives = 240/619 (38%), Gaps = 77/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSLALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++D   + V IAG GFIN++L+ ++L +     +    E         
Sbjct: 55  PREFAQKVIDCLELDGIAEKVEIAGPGFINIFLNKAWLAERGEEALKD--ERLAVNTETA 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L  +
Sbjct: 113 QNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIAN 172

Query: 181 VFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +  + Q+   +  N SDL   Y     L    +E      + ++     +E  L   K  
Sbjct: 173 MQRKEQEGTDVSMNISDLEGFYRESKVLYDEDEEFGKTARNFVVRLQSGDEYCLEKWKQL 232

Query: 237 SVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               + +  R+ D  ++++  D  + E  ++         ++ +L  +G   E       
Sbjct: 233 VAITLKQNQRNYDRLSVSLTDDNVMGESMYNDMLSG----VVADLKEKGLAVE------- 281

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           S       +D  +        G+ +   + K DG Y Y   D+A  K +YE+   D ++Y
Sbjct: 282 SDGATVVYLDEYK-----NKDGEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++    A+          +++      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMMAWAIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAVERANKLIEEKNPELSAEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF++A     DL   +            D  E  L+  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFKRANVELSDLTHPIV---------ITDEKEQALLSKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +++     +P+ +  YL++LA +F   +           + A    +   RL+L    
Sbjct: 505 EAVQSVAREGQPHLMCTYLFELAGMFSSFYEAC------PILNAE-EGVKQSRLKLALLT 557

Query: 567 ASIINSGLNIIGVESPNEM 585
           +  I  GL+++G+E+   M
Sbjct: 558 SKTIKQGLDLLGIETLERM 576


>gi|319424887|gb|ADV52961.1| arginyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 581

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 128/615 (20%), Positives = 248/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN +++ S L + L + V       +        V ++
Sbjct: 65  LIIDTLPASAFVAKVEIAGPGFINFFINDSALAEQLQNAVNDEHLGIKLPT--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +  +   SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 KNGEQAHLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +    L +         E  ++    + +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHEVYARLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y  +DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEA----FR-NKEGEALPVIIQKADGGYLYATSDLAAMRYRSNVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R+G  + L  +++E 
Sbjct: 346 RQALHFQQVFSLAKLAKFVREDMSLEHLGFGTMNGEDGRPFK--TRSGGVVKLVDLLEEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NVRALELVRSKNPDMDEETLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++          DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRIAGIFKRV------TGLDLSQAKIVLE----HEKEKDLGNKLAQFGEILN 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    A  +
Sbjct: 513 RVVDKGQPHVLCAYLYELAGAFSSFYEAC------PVLAADNDEQKNSRLLLSQLTARTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|212633367|ref|YP_002309892.1| arginyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226701384|sp|B8CI29|SYR_SHEPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|212554851|gb|ACJ27305.1| Arginyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 581

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 125/614 (20%), Positives = 241/614 (39%), Gaps = 74/614 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            S L   L  +  +  V      RI ++R +D +HG  +TN AM+L++    +P  IA+L
Sbjct: 6   QSLLAESLNALKQQGVVPADFEARIQVDRTKDKSHGDFATNLAMMLTKAARKNPREIAQL 65

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           I+  +     V+ V IAG GFIN ++  + L   L   + S        + +   V +++
Sbjct: 66  IIDNLPQSSHVEKVEIAGPGFINFFIDDNALANQLMDALNSDHLGV--TLPESQTVVVDY 123

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFWR 184
            S N    MHVGH R  ++GD++   + F G+ V R+ ++ D G Q   L      +   
Sbjct: 124 SSPNLAKEMHVGHLRSTIIGDSVVRSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMM 242
             +      SDL   Y          ++ A++    ++     +E    + ++++  + +
Sbjct: 184 NGEQAQIELSDLENFYRAAKVRFDESEDFANRARKLVVALQSGDEYCNKLWREFNDIS-L 242

Query: 243 KIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +  + L +         E  ++      +  ++ +L  QG + E       S   +
Sbjct: 243 SHCHEIYERLGVSLTRQDVRGESSYN----DDLEQVVADLDSQGLLSE-------SNGAK 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
               +  +        G+ +   + K+DG Y Y  +D+A  + +      D  +Y +   
Sbjct: 292 VVFQEEFK-----NKEGEPLPVIIQKADGGYLYATSDMAAMRYRSNVLKADRALYFVDLR 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + + +++  +A      + +++        +   DG P K   R+G  + L  ++ E  
Sbjct: 347 QALHFQQVFKLAKTAKFVREEMSFEHMGFGTMNGEDGRPFK--TRSGGVVKLIDLLKEAD 404

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  SV++  L +  +    F F ++    + N  
Sbjct: 405 TRALELVRSKNPDMDEAELAEIARVVGIASVKYADLSKNRTSDYIFSFEQMLSF-EGNTA 463

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YAY R   IF++A+      D DL    ++ +       E  L   LA++  V+  
Sbjct: 464 PYLLYAYTRVAGIFKRAQ------DVDLSDAKIVLE----HEKEKDLGTKLAQFGEVMNR 513

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                +P+ L  YL++LA  F   +           + A+       RL L    A  + 
Sbjct: 514 VVNKGQPHALCAYLFELAGAFSSFYEAC------PVLAADTEAQKKSRLLLAQLTAKTLK 567

Query: 572 SGLNIIGVESPNEM 585
            GLN++G+E+   M
Sbjct: 568 QGLNLLGLETLERM 581


>gi|326561173|gb|EGE11538.1| arginyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 575

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/618 (19%), Positives = 232/618 (37%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ +  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISRHANQANIS--RTLGVNTAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSV 238
           +       + + D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATTLIKQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P+ L  YL++LA +F   +           + +++ K    RL+L    A
Sbjct: 505 VLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 558 KTLKQGLQLLGIKTVEKM 575


>gi|326572757|gb|EGE22743.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 575

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 124/618 (20%), Positives = 232/618 (37%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ K  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNTAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           +       + + D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATTLIEQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYAFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFVRAGLDMADIGGEIV---------IHEDKERALAVKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P+ L  YL++LA +F   +           + +++ K    RL+L    A
Sbjct: 505 VLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 558 KTLKQGLQLLGIKTVEKM 575


>gi|113461098|ref|YP_719166.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123132089|sp|Q0I3B0|SYR_HAES1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112823141|gb|ABI25230.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 577

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 117/617 (18%), Positives = 241/617 (39%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S+++K  +++     + +       +++       G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSNKIKQAMRQAGADEQCDA------LVKPSGKPQFGDYQANGIMATAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  I +    + + IAG GFIN++L  ++L + +   +          + + 
Sbjct: 55  PRDFAQKVLDLIDLKNIAEKMEIAGPGFINIFLDKNWLAENIQVTLQDKKLGV--TVEEI 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A ++      F E+    +VK  +  A
Sbjct: 173 LEKMENEHASAMELADLEAFYRA----------AKEHYDNDETFAEKARNYVVKLQNGDA 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +  ++ +   +    +   I+   K++   
Sbjct: 223 YCRTMWKKLVDITMQQNQ----RNYDRLNVTLTQNDVMGESLYNPMLPEIVADLKAQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D +  Q+++        GD +   + K DG + Y   D+A  K +Y     D  +   
Sbjct: 279 VED-EGAQVVYLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYHTLKADRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +            +      + L +DG P K   R+G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFK--TRSGGTVKLTDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +  +    FD+  +    + 
Sbjct: 396 EAIERADKLISEKSTALSSKEKAAVIEAVGIGSVKYADLSKNRTTDYVFDWDIMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +      D+  +      I      D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-----TDISEEQLHPAKI---QLTDEKERLLAIKLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         +  +N  + + RL+L      
Sbjct: 507 VQIVGKEGTPHILCAYLYELAGLFSSFYEHC------PILNNDNENVKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++  +M
Sbjct: 561 TLKQGLDLLGIKTVEKM 577


>gi|302189057|ref|ZP_07265730.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 578

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 236/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLEA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|85711525|ref|ZP_01042583.1| arginyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694677|gb|EAQ32617.1| arginyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 580

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/616 (20%), Positives = 250/616 (40%), Gaps = 69/616 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       + + + ++     +   +  +I ++RPRD +HG  ++N A++L++P  ++P 
Sbjct: 1   MKEQLEQLITDAVGQLKADGILPTDLTVKIQLDRPRDKSHGDFASNLALMLAKPAKMNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE ++  I  +  +    IAG GFIN  ++   L+  L++++ S  + G     K   
Sbjct: 61  QLAEKVIEAIPANTLIAKTDIAGPGFINFTIAQDQLKSQLTTMLSS-ADLGIQPAEKPMT 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I++ S N    MHVGH R A++GD ++      G++V R+ ++ D G Q   L   + 
Sbjct: 120 IVIDYSSPNLAKEMHVGHLRSAIIGDAVSRTAEMLGHKVIRQNHVGDWGTQFGMLLAHME 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQA 240
               +A     S+L   Y          ++ A++    ++     ++  L +   + +  
Sbjct: 180 ELDSEAANYELSNLETFYKAAKKRFDESEDFAERARELVVKLQSGDDYCLKLWNQF-IDV 238

Query: 241 MMKIIRDDLKALNIQ--HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +   ++    L ++   D  ++E  ++   P     +I++L +QG + E        + 
Sbjct: 239 SLAHCQEVYDRLGVKLTRDDVMAESAYNDRLPG----VIEHLKQQGLLVE-------DQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
            Q   +D  +        G+ +   + K  G Y Y   DLA  + +  E G D ++Y + 
Sbjct: 288 AQCVFLDEFK-----GKEGEPLPIIVQKKGGGYLYATTDLAAIQYRQKELGGDYLMYFVD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE 416
           +  S + +++  +A      +  I         +  +DG P K   R G    L  ++DE
Sbjct: 343 ARQSLHFEQIFTLARKAKFIEGDIKTQHYGFGTVMGKDGRPYK--SRDGGVTKLADLLDE 400

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  SV++  L +  +    FD+  +    + N
Sbjct: 401 AERRALELLQQKNSDLTAEQQEAVAKVVGISSVKYADLSKNRTSDYIFDWDLML-TFEGN 459

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YA+ R  SIF +  +   D+D D             D  EL L   L  +  V+
Sbjct: 460 TAPYLLYAFTRVNSIFDKLGERSFDMDADWL---------LEDERELALANQLIRFEEVV 510

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  YL++LA  F   +           +   +  +   RL+L    A+ 
Sbjct: 511 NRVFDKAMPHFLCGYLFELAGYFSSFYEAC------PILNQEDEAVRNSRLKLARLTANT 564

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++G+ +  +M
Sbjct: 565 LEKGLALLGIPTLEKM 580


>gi|325995606|gb|ADZ51011.1| Arginyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 541

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/572 (28%), Positives = 282/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVAFKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+ +L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L R   +YE                   ++  +S+
Sbjct: 244 HFDSYASEREIFKHK----DAVFERLERANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++                +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------WQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ +E++       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|257482926|ref|ZP_05636967.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 578

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 235/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEVELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|15149476|ref|NP_002878.2| arginyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178331|sp|P54136|SYRC_HUMAN RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|12653513|gb|AAH00528.1| Arginyl-tRNA synthetase [Homo sapiens]
 gi|15779108|gb|AAH14619.1| Arginyl-tRNA synthetase [Homo sapiens]
 gi|30583627|gb|AAP36058.1| arginyl-tRNA synthetase [Homo sapiens]
 gi|61359156|gb|AAX41676.1| arginyl-tRNA synthetase [synthetic construct]
          Length = 660

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/624 (20%), Positives = 260/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|326569480|gb|EGE19540.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 575

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 125/618 (20%), Positives = 232/618 (37%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ K  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNAAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           +       + N D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKNLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATTLIEQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P+ L  YL++LA +F   +           + +++ K    RL+L    A
Sbjct: 505 VLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 558 KTLKQGLQLLGIKTVEKM 575


>gi|284931022|gb|ADC30960.1| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 549

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 155/590 (26%), Positives = 290/590 (49%), Gaps = 49/590 (8%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    +++ + LK+++    +E       +I++ ++   G  S+N AM+LS+    +P 
Sbjct: 2   VFKKIKTQIDHALKQLNLPTDIEY------LIQQTKNIQFGDFSSNVAMVLSKRQNKNPE 55

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I+ ++  +   + +  +  GFIN +LS      +L  +  +     +    +   
Sbjct: 56  EIAKQIIEQLNPNE-FEKITFSKPGFINFFLSNQDKLVVLKRLQKTNYSVEKLPKEEQES 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +NIEFVSANPTG +H+GH R +  GD L +++   G+ VT+EY+IND G Q++  ALS  
Sbjct: 115 INIEFVSANPTGFLHLGHVRNSYTGDVLGNILRAVGHNVTKEYWINDLGNQVSLFALSTI 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKD 235
            RY Q L  N   LP+  Y G     V +E+   + ++  +         + K    +  
Sbjct: 175 IRYLQKLGINKYQLPDDSYHGKEPIFVAEEMIKDFGNKYQDIKIEDNKIVDSKIANELTQ 234

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y    M+  I+ DL+++ ++ D++ SE   ++   + + ++++N   + ++YE       
Sbjct: 235 YCTNKMLHFIKQDLESIGVKMDVWTSEKVVYQ--SNTLTELLNN-QLKDHIYE------- 284

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                        +  R+T  GDD DR ++K +   TY+  D+A    K++RGFD +I V
Sbjct: 285 ---------QDGAVWLRTTDGGDDKDRVIIKENKQPTYYGTDIANHYLKHKRGFDRLINV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH G++ R    A     KK +  V+L E+V+L +D   IK SKR G+ I++  +++
Sbjct: 336 WGADHFGHILRTAYAAELTGIKKGKFVVVLIEMVKLLKDNKEIKFSKRLGNAISIPDMLE 395

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +  D+ R+ ML +  +  +  D     ++   NPV+YVQYA+AR   +  +A+     +
Sbjct: 396 FLSKDASRWFMLNQSWTSGIKIDVDLTNKKDSSNPVYYVQYAHARIHKLLTKAE----HI 451

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D      +++  +      E  ++ +LA +   + N     E  KL  ++Y L   FH  
Sbjct: 452 DLTKVNLSLLNSDV-----ERTMVNYLASFEHYVHNVATTYEVNKLLNFVYTLTQSFHSW 506

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++          +     ++   RL L  A+ ++IN  L++ G+E+  +M
Sbjct: 507 YNSHE-------ILNQKDEIKQTRLLLAKAIKNLINYLLSLFGIEAVEQM 549


>gi|119581911|gb|EAW61507.1| arginyl-tRNA synthetase [Homo sapiens]
          Length = 660

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/624 (20%), Positives = 260/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|71735913|ref|YP_272687.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|109895018|sp|Q48PI2|SYR_PSE14 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71556466|gb|AAZ35677.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 578

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 235/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPSDEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|332822646|ref|XP_518086.3| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 660

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/624 (20%), Positives = 260/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|301170344|emb|CBW29950.1| arginyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 577

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 121/617 (19%), Positives = 235/617 (38%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++   ++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVTRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDESIKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+++  +M
Sbjct: 561 TLKQGLTLLGIKTVEKM 577


>gi|317177134|dbj|BAJ54923.1| arginyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 541

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 279/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +     +G +    +  K+ +EFVSANPTGP+H+GH R A+ GD+LA 
Sbjct: 82  SLDFLERFTQKALELKERFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAMFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWIAYREHVLKESVTYPEVFYKGEYIIEIAKQ 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKICEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|289624155|ref|ZP_06457109.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647384|ref|ZP_06478727.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330865708|gb|EGH00417.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 578

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 235/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  R+  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARNKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TSFDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|90411614|ref|ZP_01219624.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327504|gb|EAS43857.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 576

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/633 (19%), Positives = 237/633 (37%), Gaps = 105/633 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKIQFGDYQANGVMGVAKKLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D   + V IAG GFIN++L  S+L       +            K 
Sbjct: 55  PREFAQKVIDVLDLDGIAEKVEIAGPGFINIFLDKSWLAARAEEALTDDRIGV--AAEKQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  +
Sbjct: 113 QNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIAN 172

Query: 181 V-------------------FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           +                   F+R  + LY+ D +        V     G E       +L
Sbjct: 173 LERVQNETGEVSMELADLEGFYRESKKLYDEDEEFAVRARGFVVKLQSGDEYCAGMWKKL 232

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           ++              V  +   I  D   +++  D  + E  ++   P+    I+ +L 
Sbjct: 233 VD--------------VTMVQNQINYDRLNVSLTRDNVMGESMYNDMLPN----IVADLK 274

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G   E       S   Q   +D  +        GD +   + K DG + Y   D+A  
Sbjct: 275 EKGLAVE-------SDGAQVVFLDEYK-----NKDGDPMGVIIQKRDGGFLYTTTDIACA 322

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIK 399
           K ++E+   D ++Y + S    ++ +  ++         ++ +      + L +DG P K
Sbjct: 323 KYRFEQLNADRVLYFIDSRQHQHLMQAWSIVRKAGYVPEEVTLEHHAFGMMLGKDGRPFK 382

Query: 400 MSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNS 432
              RAG  + L  ++DE                           V   +V++  L +  +
Sbjct: 383 --TRAGGTVRLADLLDESEVRAAKLIEAKNPELEATEKDKIAKTVAMAAVKYADLSKHRT 440

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD+  +    + N   Y+QYAY R  SIF++A     D++       ++      D
Sbjct: 441 TDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----DVNLADLTHPIVIN----D 490

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L+  L ++   + N +   +P+ +  YL++LA  F   +           + A  
Sbjct: 491 EKEQALLSTLLQFEEAVLNVSREGQPHLMCTYLFELAGKFSSFYEAC------PILNAE- 543

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL+L    A  I  GL+++G+E+   M
Sbjct: 544 EAVKQSRLKLALLTAKTIKQGLDLLGIETLERM 576


>gi|330951295|gb|EGH51555.1| arginyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 578

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 235/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATPDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|304413606|ref|ZP_07395050.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283697|gb|EFL92091.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 576

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 125/615 (20%), Positives = 239/615 (38%), Gaps = 69/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S+++   +         + +      + +      G    NA M +++ L + 
Sbjct: 1   MNIQALLSNKINQAMIAAGASPDTDAQ------VRQSAKPQFGDYQANAVMSVAKMLNIP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ IV R+ +      + IAG GFIN++L   +L   +  I+ +      ++I   
Sbjct: 55  PRQLADKIVQRLDLAGIAQKIEIAGPGFINIFLDRQWLATQVDHILKAPKLGLTSVI--P 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ + N    MHVGH R  ++GD  A  +   G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVIDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++   +      E +Y            A K   E   F +     +VK  +   
Sbjct: 173 LEKMQRENADDMALSDLEKFYRA----------AKKNYDEDNEFAQHARAYVVKLQAGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + ++ +       + R   +  ++ I   +    +  GI+   K+K   
Sbjct: 223 HCRSMWRKLVDITMEQNQL----SYQRLHVTLTKEDIMGESLYNPMLPGIITDLKTKGLA 278

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +Y+  G D ++Y  
Sbjct: 279 -VESNGATVVFVGEYKNKKGEPMGVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYYT 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSK------------- 402
            S    ++ ++  +A         + +      + L +DG P K                
Sbjct: 338 DSRQHQHLTQIWQIARQAGYVPESMPLEHHMFGMMLGKDGKPFKSRTGENIKLADLLDEA 397

Query: 403 --RAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RAG  I  ++          + D VG  ++++  L +  +    FD+  +      N 
Sbjct: 398 IERAGKLIREKNPDISPQELKQIADAVGIGALKYADLSKNRTTDYIFDWDNMLTFD-GNT 456

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R  SIF++A      +D +     VI  E      E  L   L ++  +I 
Sbjct: 457 APYIQYAYTRIISIFKRAA-----IDEEHLNLPVIITE----DREAALTTSLLQFEEIIT 507

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P+ +  YLY+LA +F   + H         + A N +    RL+L    A  +
Sbjct: 508 TVARDGTPHVMCSYLYNLAVLFSSFYEHC------PILNAGNEQTCQSRLKLALLTAKTL 561

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+++  +M
Sbjct: 562 KQGLDVLGIQTVEKM 576


>gi|162455942|ref|YP_001618309.1| arginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161166524|emb|CAN97829.1| argS [Sorangium cellulosum 'So ce 56']
          Length = 577

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 136/588 (23%), Positives = 230/588 (39%), Gaps = 82/588 (13%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R   H     NAAM L + LG  P  +A  IVA +++D     V IAG GF+NL L  +Y
Sbjct: 32  RRSTHADYQANAAMALGKRLGRPPREVAAAIVAALELDGICRKVEIAGPGFVNLTLEDAY 91

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L + L+     G   G     +   V +++   N    MHVGH R  ++GD LA ++   
Sbjct: 92  LTRELAE-TAGGGRLGIAPAAEPETVIVDYSGPNAAKEMHVGHLRSTIIGDALARVLEAL 150

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGVYLKHVGKELAD 215
           G+ V R+ ++ D G     L   +    + A     S  DL   Y             A+
Sbjct: 151 GHRVIRQNHLGDWGTPFGMLIEHMLDLGEAAASQELSVGDLNAFYRQARAKFDGDAAFAE 210

Query: 216 KYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPS 271
           +    ++     +E+ L + +   V+   +      + L +      F  E  ++   P 
Sbjct: 211 RSRRRVVRLQGGDEQTLALWRQL-VRESTRYFDSVYRRLGVTLTDADFAGESFYNPMLP- 268

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSD 328
              D+++ L R+G   E                +    +F +      G+ +   + K D
Sbjct: 269 ---DVVEELGRKGLARES---------------EGALCVFPAGFTGKGGEPLPLIVRKQD 310

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLL 385
           G Y Y   DLA  + +    G   ++YV+G+  S +   + A A         A+   + 
Sbjct: 311 GGYGYATTDLAAIRHRLTTVGARRIVYVVGAPQSQHFAMVFATAREAGWLTPPARAEHVA 370

Query: 386 CELVRLYRDGMPIKM-SKRAGDFITLRHVVDE---------------------------V 417
              V     G   KM   R+GD + L  ++DE                           V
Sbjct: 371 FGSVL----GADKKMFKTRSGDTVKLSDLIDEATERAAKVVREKNPDLDAEAADAVARSV 426

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V++  L     +   FD+ ++    + N   Y+ YA+AR RSIFR+A    P    
Sbjct: 427 GVGAVKYADLSSDRIKDYVFDWDRML-AFEGNTAPYLMYAHARIRSIFRKAGVESPREAG 485

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            +            + +E  L + L  +  V+E+     EP++L  YL++LA  F   + 
Sbjct: 486 IVLS----------EPAERALALELLRFGAVLEDVAATLEPHRLCGYLFELAGSFTSFYE 535

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     ++A +  +   RL L    A ++  GL ++G+E+P  M
Sbjct: 536 RC------PVLRAESDDVRRSRLALCDLTAEVLAKGLGLLGIEAPERM 577


>gi|326574023|gb|EGE23972.1| arginyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 575

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 124/618 (20%), Positives = 232/618 (37%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ K  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNAAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           +       + + D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATTLIEQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P+ L  YL++LA +F   +           + +++ K    RL+L    A
Sbjct: 505 VLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 558 KTLKQGLQLLGIKTVEKM 575


>gi|109947543|ref|YP_664771.1| arginyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123173388|sp|Q17X54|SYR_HELAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109714764|emb|CAJ99772.1| argS [Helicobacter acinonychis str. Sheeba]
          Length = 541

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/572 (28%), Positives = 284/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKSVLEEILEAEVIIEHPKDREHGHYATPIAFNLAKIFKKSPLVIAEELALKISTHAKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G +       K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVACKGYINFTLSLDFLERFTQKALELKEKFGSKFKSENSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKEGV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+D+L +L I
Sbjct: 184 TYPEVFYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSSYAKDLMLLEIKDNLDSLGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        +  NL +   +YE                   ++  +S+
Sbjct: 244 HFDSYASEKEIFKHK----DAVFKNLEKANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D +YTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLVKEDKNYTYLAGDIVYHNEKFKQNYTKYINIWGADHHGYIARVKASLKFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++V L +D  P KMSKRAG+FI ++ VVD++G D++RF+ L ++    
Sbjct: 344 GYDSNKLEVLLAQMVGLLKDNEPYKMSKRAGNFILIKDVVDDIGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++        +       +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------LQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P++IE +       K+  Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKIIEASFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
            T   L++   V+  + +   ++G+E   ++S
Sbjct: 507 KTKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|32266208|ref|NP_860240.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81666101|sp|Q7VI99|SYR_HELHP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|32262258|gb|AAP77306.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 548

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 156/543 (28%), Positives = 277/543 (51%), Gaps = 44/543 (8%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           + +++K +       K  +D IV+ERP++   GH +T  A+ L++    +P  IAE I  
Sbjct: 1   MHHHIKALLQSALNIKNTID-IVLERPKNKDLGHFATPLALSLAKIEKTNPKLIAEEIAK 59

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-------------EYGRNLI 117
            +    + + V     GF+NL LS ++L+ I    +   +                +  I
Sbjct: 60  ILTNYAEFEKVETLN-GFVNLTLSTTFLQHIAQKQLQHCMTLEADSINPNISQYTQKTQI 118

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                + IEFVSANPTGP+H+GH R AV GD L  +  F GY++  EYYINDAGAQI  L
Sbjct: 119 TPKEHILIEFVSANPTGPLHIGHARGAVYGDALTRVGRFLGYDILTEYYINDAGAQIYML 178

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            LS+F   ++ +     + P+ YY G Y+  + K+ A  +  ++  F  E  +  + D+ 
Sbjct: 179 GLSIFLAGREHILKTQVEYPQSYYKGEYIIDLAKQCALHFGEDV--FKSEDSISSLADFG 236

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
              M++ I+D+L  + I+ D F+SE   +       +D +D L     +Y          
Sbjct: 237 KDMMLQEIKDNLAQVGIKFDSFVSEKSLY----DRWQDTLDTLKSHQGIY---------- 282

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                     ++   S+ + D+ DR +++ +G  TY A D+ Y + K+ R F++ I + G
Sbjct: 283 ------TKDGKIWIASSQINDEKDRVVVRENGEPTYLAGDIIYHQDKFHRHFEHYINIWG 336

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH GY+ R++A    +   + ++ VLL ++V L + G P KMSKRAG+FI ++ V++++
Sbjct: 337 ADHHGYIARVKAAIHFLGYDENKLEVLLSQMVSLLKGGQPYKMSKRAGNFILMKDVIEDI 396

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G+D++RF+ L +K    L+FD  ++K++   NP++Y+ YA AR  ++F +A         
Sbjct: 397 GADALRFIFLSKKPDTHLEFDVDELKKEDGSNPIYYINYANARIHTLFNKAGVNMQQTAQ 456

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +    ++       +     L+       ++IE++   +E  K+  YL  L++ FH  ++
Sbjct: 457 NANKLDI-------NEQAKALLFEALCLQQIIESSFRNREIQKICDYLKSLSASFHSFYN 509

Query: 538 HGR 540
             +
Sbjct: 510 THK 512


>gi|317181661|dbj|BAJ59445.1| arginyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 541

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 164/554 (29%), Positives = 281/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISAHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEKFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV REYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLREYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +   + 
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDT- 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|146291657|ref|YP_001182081.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166232842|sp|A4Y2U9|SYR_SHEPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145563347|gb|ABP74282.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 581

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 128/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  +      RI ++R +D +HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IQSLLEQTIESFKQQGILPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN +++ S L   L + V       +        V ++
Sbjct: 65  LIIDTLPASAFVAKVEIAGPGFINFFINDSALADQLQNAVNDEHLGIKLPT--PQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +  +   SDL   Y           E A +    ++     +E    + ++++  + 
Sbjct: 183 KNGEQAHLELSDLETFYRAAKLRFDESAEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +    L +         E  ++    + +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHEVYARLGVSLTRADVHGESAYN----ADLEQVVKDLDAQGLLTE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    +     FR    G+ +   + K+DG Y Y  +DLA  + +      D ++Y +  
Sbjct: 291 KVVFQEA----FR-NKEGEALPVIIQKADGGYLYATSDLAAMRYRSNVLKADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A      +  +++  L        DG P K   R+G  + L  +++E 
Sbjct: 346 RQALHFQQVFSLAKLAKFVREDMSLEHLGFGTMNGEDGRPFK--TRSGGVVKLVDLLEEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    F F ++    + N 
Sbjct: 404 NVRALELVRSKNPDMDEETLAEIARVVGISAVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++          DL    ++ +       E  L   LA++  ++ 
Sbjct: 463 APYLLYAYTRVAGIFKRV------TGLDLSQAKIVLE----HEKEKDLGNKLAQFGEILN 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YLY+LA  F   +           + A+N +    RL L    A  +
Sbjct: 513 RVVDKGQPHVLCAYLYELAGAFSSFYEAC------PVLAADNDEQKNSRLLLSQLTARTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GLN++G+E+   M
Sbjct: 567 QKGLNLLGIETLERM 581


>gi|158337656|ref|YP_001518831.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158307897|gb|ABW29514.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 584

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 137/623 (21%), Positives = 242/623 (38%), Gaps = 82/623 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     +R    L          + ++   V+    +   G   +N ++ L++PLG  P 
Sbjct: 4   ILKTLETRFDRALNAAFGA----ELVISVPVVGVASNPKFGDYQSNVSLALAKPLGQSPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I+  +++D   +   IAG GFINL L P++L + L  +       G   I    +
Sbjct: 60  GIADQILQHLEVDDLCEPPTIAGPGFINLTLKPTFLAEQLQQMQAD-PRLGIEPIADPQR 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD +A ++ F G +V R  ++ D G Q   L   + 
Sbjct: 119 VIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGNDVLRLNHVGDWGTQFGMLITYLS 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD------- 235
             +  AL  +D+ L  G     Y K      A +   E  +F  +    +VK        
Sbjct: 179 EVHPAALTTSDA-LDLGDLVAFYKK------AKQRFDEDEDFQVQSRNAVVKLQQGDSEA 231

Query: 236 -YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             + Q +    R + + +    DI ++E      +P  + D++ +L + G +        
Sbjct: 232 TQAWQLLCDQSRREFEKIYRDLDIELTERGESFYNP-FLADVLTDLDKAGLL-------E 283

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
             +  Q   ++       +   GD     + KSDG + Y   DLA  + +        +I
Sbjct: 284 TDQGAQCVFLEG-----FTNKQGDPQPLIVQKSDGGFNYATTDLAALRHRITAESAQRLI 338

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           Y+  +  + +  ++  VA         I V+      L +     K+  R+G  I LR +
Sbjct: 339 YITDAGQANHFAQVFQVARRAQWMPETIQVVHMPFG-LVQGEDGKKLKTRSGKTIRLRDL 397

Query: 414 VDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           +DE                               +G  +V++  L +  +    F + K+
Sbjct: 398 LDEAVTRAQTDIETRLAEEDRTESPDFIANAAQVIGLGAVKYADLSQNRTSNYVFSYDKM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+ YAY R + I R+ K  F  LD      ++I  E     SEL L  HL
Sbjct: 458 LAL-QGNTAPYMLYAYVRVQGISRKGKIDFSQLD----DVSLIIAE----PSELALAKHL 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +   ++        P +L  YL++L+  F+  +           + A        RL L
Sbjct: 509 LQMQDILSEVAADLLPNRLCQYLFELSQKFNQFYDQC------PVLNAEEPA-RTSRLVL 561

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL+++G+E    M
Sbjct: 562 SDLTARTLKLGLSLLGIEVLERM 584


>gi|119773583|ref|YP_926323.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166232838|sp|A1S2P7|SYR_SHEAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119766083|gb|ABL98653.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 581

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/613 (21%), Positives = 244/613 (39%), Gaps = 70/613 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  L+ +  +  V      RI ++R +D +HG L+TN AM+L++  G  P  +A+
Sbjct: 5   IQSLLEQTLESLKAQGIVPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKPPREMAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  + L   L + +   +   +        V ++
Sbjct: 65  LIIDNLPASAQVAKVEIAGPGFINFFIDDNALANQLKAALGDAMLGVK--AAAPQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L   +     
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 187 QALYNNDSDL--PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           Q     + +L   E +Y    L+            E   F       +V+  S  A    
Sbjct: 183 QGDDKANLELSDLESFYRAAKLRF----------DESDEFATRARQLVVELQSGDAYCNK 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +  +   +++ H      D + R   S  R  +   +        ++    +K       
Sbjct: 233 LWREFNDISLSHCH----DVYARLGVSLTRKDVHGESAYNADLAQVVADLDAKGL-LAIS 287

Query: 305 DRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
           D  +++F+       G+ +   + K+DG + Y   DLA  + +      D ++Y +    
Sbjct: 288 DGAKVVFQEEFRNKDGEPLPVIIQKADGGFLYATTDLAAMRYRSGVLNADRVLYFVDLRQ 347

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--- 416
           + + +++ ++A      +  + +       +   DG P K   R+G  + L  ++DE   
Sbjct: 348 ALHFQQVFSLARTAGFVRDNMTLEHMGFGTMNGEDGRPFK--TRSGGVVKLVDLLDEAVE 405

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  SV++  L +  S    F F ++    + N   
Sbjct: 406 RAEQLVRSKNPDMDETEVKEIARVVGIASVKYADLSKNRSSDYIFSFEQMLSF-EGNTAP 464

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R   IF++A+      + DL    ++         E +L   LA++  ++   
Sbjct: 465 YLLYAYTRVAGIFKKAE------NIDLTNAELV----LDHDKEKELGNKLAQFGEILARM 514

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P+ L  YLY+LA  F   +           + A++      RL L    A  +  
Sbjct: 515 VDKGQPHILCGYLYELAGAFSSFYEAC------PVLSADSETARDSRLLLSRLTADTLKQ 568

Query: 573 GLNIIGVESPNEM 585
           GL+++G+E+   M
Sbjct: 569 GLSLLGIETLERM 581


>gi|182892034|gb|AAI65718.1| Rars protein [Danio rerio]
          Length = 661

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/619 (21%), Positives = 243/619 (39%), Gaps = 72/619 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +  L+    E              + +   +    G    N+AM +     ++ L + 
Sbjct: 76  NINQLLQQIFGEAISS-AYPDLENPPLSVTPSQQAKFGDYQCNSAMAMSQMMKAKGLKVS 134

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  I  +  ++   IAG GFIN++L  +++ K+LS+++V+G++     + K 
Sbjct: 135 PREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPP--PLQKK 192

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++GD++  L  F GYEV R  ++ D G Q   L   
Sbjct: 193 KKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAH 252

Query: 181 VFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL   Y          +E   +    ++     +    +K  + 
Sbjct: 253 LQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKLQSREA-DFIK--AW 309

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R + + +    DI I E    +++     +  ++     +G V          
Sbjct: 310 NLICDVSRKEFQKVYNCLDISIKERGESYYQ---DMMTAVVKEFEEKGLVEVD------- 359

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   + ++++F     G  +   ++KSDG YTY  +DLA  + + ++   D +IYV
Sbjct: 360 --------EGRKIVF---APGQSIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYV 408

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
             S  + + + + A A  +     ++  +      +       K   R+GD + L  +++
Sbjct: 409 TDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLE 468

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 469 EGLKRSMDKLKEKERDKVLTPEELEKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLD-D 527

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YA+ R RSI R A      L       +VI         E +L   +  +P
Sbjct: 528 RGNTAAYLLYAFTRIRSIARLANIQEAALRKAAETTDVI----LDHEKEWKLGKCILRFP 583

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +++  T     + L  YLY+LA+ F   +       + R       K+ M R+ L  A 
Sbjct: 584 EILQKITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQ-TGEVVKVNMWRMLLCEAT 642

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+++  G +I+G+     M
Sbjct: 643 AAVMAKGFDILGINPVQRM 661


>gi|163750994|ref|ZP_02158226.1| arginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329284|gb|EDQ00282.1| arginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 581

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 123/615 (20%), Positives = 248/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   L  +  +  +      RI ++R +D  HG  +TN AM+L++    +P  IA+
Sbjct: 5   IQSLLVQALDVLKQQGVIPTDFEARIQVDRTKDKTHGDFATNLAMMLTKIARKNPREIAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +  D  V  V IAG GFIN ++    L   L + +          + +   + ++
Sbjct: 65  LIIDSLPQDSQVAKVEIAGPGFINFFIDEDALANQLMAALKDDHLGIC--LPEQQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +    + +DL   Y          ++ A +    +++    +E    + ++++  + 
Sbjct: 183 KNGEQAQMDLADLETFYRAAKVRFDESEDFAVRARKLVVSLQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    D    L +    +    E  ++    + + +++  L  QG + E       S   
Sbjct: 242 LNHCHDVYARLGVSLTREDVRGESAYN----ADLAEVVKELKAQGLLSE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    D  +        GD +   + K+DG Y Y  +D+A  + + +    D ++Y +  
Sbjct: 291 KVVFQDEFK-----NKEGDPLPVIIQKADGGYLYATSDMAAMRYRSKVLNADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++  +A   +  + ++++       +   DG P K   R+G  + L  +++E 
Sbjct: 346 RQALHFQQVFKLARKANFVRPELSLEHMGFGTMNGADGRPFK--TRSGGVVKLVDLLNEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F ++    + N 
Sbjct: 404 DTRALELVRSKNPDMDEAELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++AK      D DL    ++ +       E  L   LA++  V+ 
Sbjct: 463 APYLLYAYTRVTGIFKRAK------DIDLSDAKIVLE----HDKEKNLGNKLAQFAEVLS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ +  YL++LA  F   +           + A        RL +    A  +
Sbjct: 513 RMVAKGQPHAMCAYLFELAGAFSSFYEAC------PVLAAETEAQKKSRLLIAQLTAKTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+E+ + M
Sbjct: 567 KQGLDLLGIETLDRM 581


>gi|296112948|ref|YP_003626886.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920642|gb|ADG60993.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 575

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 124/618 (20%), Positives = 232/618 (37%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ K  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDNIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNAAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           +       + + D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATTLIEQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P+ L  YL++LA +F   +           + +++ K    RL+L    A
Sbjct: 505 VLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 558 KTLKQGLQLLGIKTVEKM 575


>gi|157373673|ref|YP_001472273.1| arginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083550|sp|A8FQM2|SYR_SHESH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157316047|gb|ABV35145.1| Arginine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 581

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 125/615 (20%), Positives = 238/615 (38%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   L  +  +  +      R+ ++R +D  HG  +TN AM+L++    +P  +A+
Sbjct: 5   IQSLLIQALDALKQQGVIPTDFEARVQVDRTKDKTHGDFATNLAMMLTKVARKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +  D  V  V IAG GFIN ++  + L   L + +       +  + +   V ++
Sbjct: 65  LIIDSLPQDSQVAKVEIAGPGFINFFIDENALASQLMAALNDDHLGIQ--LPEPQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G+ V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFQGHNVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
              +      SDL   Y          ++ A +    +++    +E    + ++++  + 
Sbjct: 183 ENGEQAQMELSDLETFYRAAKVRFDESEDFAIRARKLVVSLQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNIQHDIFI--SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    D  + L +         E  ++      +  ++ +L  +G + E       S   
Sbjct: 242 LSHCHDVYERLGVSLTRKDVRGESTYN----DDLEQVVKDLDAKGLLSE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    D  +     T  GD +   + K+DG Y Y  +DLA  + +      D  +Y +  
Sbjct: 291 KVVFQDEFK-----TKDGDPLPVIIQKADGGYLYATSDLAAMRYRSNVLKADRALYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE- 416
               + +++  +A         +++       +   DG P K   R+G  + L  ++ E 
Sbjct: 346 RQGLHFQQVFKLARTAEFINPDMSLEHMGFGTMNGDDGRPFK--TRSGGVVKLVDLLTEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F ++    + N 
Sbjct: 404 DTRALELVRSKNPDMDQAELEKIAKVVGISSVKYADLSKNRASDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    +          E  L   LA++  V+ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDIDLSDAKM----QLDHDKEKDLGNKLAQFGEVLS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YL++LA  F   +           + A + +    RL L    A  +
Sbjct: 513 RMVTKGQPHALCGYLFELAGAFSSFYEAC------PVLAAESEEQKKSRLLLSQLTAKTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+E+   M
Sbjct: 567 KQGLDLLGIETLERM 581


>gi|312882113|ref|ZP_07741863.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370249|gb|EFP97751.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 577

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 233/619 (37%), Gaps = 76/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + ++   L+                 + +      G    N  M +++ LG++
Sbjct: 1   MNIQALINDKVSQALEAAGAPAGSPA------AVRQSAKPQFGDYQANGVMGVAKKLGMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +K+D       IAG GFIN++LS  +L       +            K 
Sbjct: 55  PREFAQKVIDELKLDGIASKTEIAGPGFINIFLSEEFLATQADYALSDDRLG--IDKEKQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V  ++ + N    M V H R  V+GD +   + F G++V R  +I D G Q   L  +
Sbjct: 113 QTVVTDYSAPNVAKEMAVHHIRSTVIGDAVTRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYS 237
           +    Q+   +    SDL   Y     L    +  A K  + ++     +++   +    
Sbjct: 173 LERVQQESGEVSMELSDLEAFYRDSKKLFDEDEAFATKARNYVVKLQSGDEYCAGMWKKL 232

Query: 238 VQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           V   M   + +   LN+    D  + E  ++      +  I+ +L ++G V E       
Sbjct: 233 VDITMIQNQRNYDRLNVSLSRDDVMGESMYN----DMLGGIVADLKKKGLVEE------- 281

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
            +  Q   +D  +        G+ +   + KSDG + Y   D+A  K +YE  G + ++Y
Sbjct: 282 DEGAQVVFLDEFK-----NKDGEPMGVIVQKSDGGFLYTTTDIACAKYRYETLGANRVLY 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + S    ++ +   +          + +      + L +DG P K   RAG  + L  +
Sbjct: 337 FIDSRQHQHLMQAWTIVRKAGYIPENVTLEHHAFGMMLGKDGKPFK--TRAGGSVKLTDL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           V   +V++  L +  +    FD+  +    
Sbjct: 395 LDEAEERAAKLIESKNPQLSAEEKTAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIF +A+     L  D+            D  E  LI  L ++ 
Sbjct: 454 EGNTAPYMQYAYTRVASIFAKAEISMDSLQGDI---------KIVDEKEKALITKLLQFE 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             ++       P+ L  YL++LA  F   +           +   +  +   RL+L    
Sbjct: 505 EAVKAVASEGLPHVLCTYLFELAGQFSSFYEAC------PILNNEDESIKQSRLKLAALT 558

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  I  GL+++G+E+   M
Sbjct: 559 AKTIKQGLDLLGIETLERM 577


>gi|149911776|ref|ZP_01900381.1| arginyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805164|gb|EDM65185.1| arginyl-tRNA synthetase [Moritella sp. PE36]
          Length = 584

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 128/614 (20%), Positives = 247/614 (40%), Gaps = 69/614 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  +  +  +  +      RI ++R RD AHG L+TN AM++++P   +P  +A+
Sbjct: 5   IIQLLEQTVTILKEQQIIPADAQPRIAVDRTRDKAHGDLATNLAMMMAKPAKKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     VD   IAG GFIN++L+ ++L + +  I +               V ++
Sbjct: 65  LIIDNLPESDLVDRTEIAGPGFINIFLNQNWLAQQI-DIALEDDNLAVQKTTAPDTVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R +++GD++A  +   G+ V R+ ++ D G Q   L   +  +  
Sbjct: 124 LSSPNLAKEMHVGHLRSSIIGDSVARTLELLGHNVIRQNHVGDWGTQFGMLLAYMEEKRA 183

Query: 187 Q--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLPIVKDYSVQAMM 242
           +   +    SDL   Y          ++ A +      +L   +E+   + K+++    +
Sbjct: 184 ENAEISMQLSDLEVFYRAAKGRFDESEDFAIRAREMVVMLQSGDEECNKLWKEFN-DVSL 242

Query: 243 KIIRDDLKALNIQ--HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               D  K LN++   D    E  ++    S + +++  L  QG + E       S   +
Sbjct: 243 AHCHDIYKRLNVKLTRDDVRGESFYN----SDLHNVVSELEAQGLLTE-------SNGAK 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              +D  +        GD +   + K+ G + Y   DLA  + + +    + ++Y +   
Sbjct: 292 CVFLDEFK-----NKDGDPLPVIIQKNGGGFLYATTDLAAMRYRQQTLNANRIMYFVDQR 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + + +++ +V       K + ++  L        DG P K   R+G  + L  ++ E  
Sbjct: 347 QALHFQQVFSVVQKAGFVKPETSLEHLGFGTMNGADGRPFK--TRSGGTVKLVDLLTEAE 404

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  SV++  L +  S    F+F  +    + N  
Sbjct: 405 ERAYALVKSKNPNLAEDELKHIARVVGISSVKYADLSKNRSSDYIFNFDSMLSF-EGNTA 463

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YA  R  SIF +       +D     +    +    +  E +L   L ++  ++  
Sbjct: 464 PYLLYACTRVGSIFNK-------VDAATEAKLATAKVQLNEDKEQELAGKLIQFNEIVHL 516

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P  L  YL++LA VF   +           +   +  + + RL+L    A  + 
Sbjct: 517 VAKRATPNTLCTYLFELAGVFSSFYEAC------PILSTEDEAIKLSRLKLAQLTAKTLK 570

Query: 572 SGLNIIGVESPNEM 585
            GL+++G+E+   M
Sbjct: 571 QGLDLLGIETLERM 584


>gi|53734470|gb|AAH83505.1| Arginyl-tRNA synthetase [Danio rerio]
          Length = 661

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 131/619 (21%), Positives = 244/619 (39%), Gaps = 72/619 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +  L+    E              + +   +    G    N+AM +     ++ L + 
Sbjct: 76  NINQLLQQIFGEAISS-AYPDLENPPLAVTPSQQAKFGDYQCNSAMAMSQMMKAKGLKVS 134

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  I  +  ++   IAG GFIN++L  +++ K+LS+++V+G++     + K 
Sbjct: 135 PREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPP--PLQKK 192

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++GD++  L  F GYEV R  ++ D G Q   L   
Sbjct: 193 KKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAH 252

Query: 181 VFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL   Y          +E   +    ++   + K    +K  + 
Sbjct: 253 LQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKL-QSKEADFIK--AW 309

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R + + +    DI I E    +++     +  ++     +G V          
Sbjct: 310 NLICDVSRKEFQKVYNCLDISIKERGESYYQ---DMMTAVVKEFEEKGLVEVD------- 359

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   + ++++F     G  +   ++KSDG YTY  +DLA  + + ++   D +IYV
Sbjct: 360 --------EGRKIVF---APGQSIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYV 408

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
             S  + + + + A A  +     ++  +      +       K   R+GD + L  +++
Sbjct: 409 TDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLE 468

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 469 EGLKRSMDKLKEKERDKVLTPEELEKAQQAVAFGCIKYADLSHNRINDYVFSFDKMLD-D 527

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YA+ R RSI R A      L       +VI         E +L   +  +P
Sbjct: 528 RGNTAAYLLYAFTRIRSIARLANIQEAALRKAAETTDVI----LDHEKEWKLGKCILRFP 583

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +++  T     + L  YLY+LA+ F   +       + R       K+ M R+ L  A 
Sbjct: 584 EILQKITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQ-TGEVVKVNMWRMLLCEAT 642

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+++  G +I+G+     M
Sbjct: 643 AAVMAKGFDILGINPVQRM 661


>gi|188527123|ref|YP_001909810.1| arginyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691899|sp|B2USE8|SYR_HELPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188143363|gb|ACD47780.1| arginyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 541

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 281/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    ++ +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLTDLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|170728748|ref|YP_001762774.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688680|sp|B1KK48|SYR_SHEWM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169814095|gb|ACA88679.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 581

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 129/615 (20%), Positives = 238/615 (38%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   L  +  +  +      RI ++R +D  HG  +TN AM+L++    +P  IA+
Sbjct: 5   IESLLAQALDVLKQQEVIPTDFEARIQVDRTKDKTHGDFATNLAMMLTKIARKNPREIAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +  D  V  V IAG GFIN ++  S L   L + +          + +   V ++
Sbjct: 65  LIIDSLPEDAQVSKVEIAGPGFINFFIDDSALANQLMTALNDDRLG--IALPQAQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y          +E A +    ++     +E    + ++++  + 
Sbjct: 183 QSGEQAQMELSDLETFYRAAKVRFDESEEFATRARKLVVALQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +  + L +         E  ++      +RD    L  QG + E       S   
Sbjct: 242 LSHCHEVYERLGVSLTRADVRGESAYNDDLAQVVRD----LDSQGLLSE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    D  +        G+ +   + K+DG Y Y  +D+A  + +      D  +Y +  
Sbjct: 291 KVVFQDEFK-----NKEGEPLPVIIQKADGGYLYATSDMAAMRYRANVLKADRALYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++  +A   +     I++       +   DG P K   R+G  + L  ++ E 
Sbjct: 346 RQALHFQQVFKLARKANFVDDNISLEHMGFGTMNGDDGRPFK--TRSGGVVKLVDLLSEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F ++    + N 
Sbjct: 404 DTRALELVRSKNPDMDEAELAKIAKVVGISSVKYADLSKNRASDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A       D DL    +          E +L   LA++  V+ 
Sbjct: 463 APYLLYAYTRVAGIFKRA------TDVDLSDAKI----QLEHEKEKELGTKLAQFNEVLT 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YL++LA  F   +           + A+  +    RL L    A  +
Sbjct: 513 RMVSKGQPHALCGYLFELAGAFSSFYEAC------PVLAADTEEQKKSRLLLAKLTAKTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+E+   M
Sbjct: 567 KQGLGLLGIETLERM 581


>gi|326577009|gb|EGE26904.1| arginyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326577465|gb|EGE27349.1| arginyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 575

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 124/618 (20%), Positives = 232/618 (37%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ K  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNAAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSV 238
           +       + + D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   +V++  L +  +    FD+  +    +
Sbjct: 395 DEAIERATTLIEQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFVRAGLDMADIGGEIV---------IHEDKERALAVKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P+ L  YL++LA +F   +           + +++ K    RL+L    A
Sbjct: 505 VLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G+++  +M
Sbjct: 558 KTLKQGLQLLGIKTVEKM 575


>gi|62897153|dbj|BAD96517.1| arginyl-tRNA synthetase variant [Homo sapiens]
          Length = 660

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/624 (20%), Positives = 260/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DGMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLAAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|330957049|gb|EGH57309.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 578

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/610 (21%), Positives = 241/610 (39%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + + L   L + +V   +      G   +V ++
Sbjct: 65  KLIAALPADDQVSKVEIAGPGFLNFFQNTAALAARLDAALVD-TQLSVRKAGPAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLEFLGDAVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-EDFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLTLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H   I E    R +       +   +        ++   K+          
Sbjct: 231 KRFKDISLSHCQEIYE----RLNVRLTPADVMGESAYNEDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLEADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHQGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLVDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIARAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD    +++ +       E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDADKGHIVLEA----PQEQELAARLAQFAETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A +      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAESPDQQKSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|298485092|ref|ZP_07003188.1| Arginyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160344|gb|EFI01369.1| Arginyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 578

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 235/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLVQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|330984740|gb|EGH82843.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 578

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 127/610 (20%), Positives = 236/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNYLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEVELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L     S +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGSTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|145639894|ref|ZP_01795494.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145270985|gb|EDK10902.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
          Length = 581

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 236/616 (38%), Gaps = 72/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++   ++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQHEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q + +    ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQY----NYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQGLA 278

Query: 301 KCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLYEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EAIERATVLINEKNTNLSNDEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +        D +       P  +  D  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNK-------TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LA +F   + H         + A +  + + RL+L      
Sbjct: 507 VQTVGKEGTPHVLCAYLYELAGIFSSFYEHC------PILNAEDEAVKLSRLKLALLTEK 560

Query: 569 IINSGLNIIGVESPNE 584
            +  GL ++G+++  +
Sbjct: 561 TLKQGLTLLGIKTVEK 576


>gi|198282039|ref|NP_001127107.1| arginyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75041818|sp|Q5RA20|SYRC_PONAB RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|55729309|emb|CAH91390.1| hypothetical protein [Pongo abelii]
          Length = 660

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/624 (21%), Positives = 260/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NVISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINIHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  +I D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHIGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DMMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   +LKSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             +    V++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  K N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DKGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|261839171|gb|ACX98936.1| arginyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 541

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 279/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEKFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTHLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKICEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|41053407|ref|NP_956342.1| arginyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|28277820|gb|AAH45884.1| Arginyl-tRNA synthetase [Danio rerio]
          Length = 661

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 131/619 (21%), Positives = 244/619 (39%), Gaps = 72/619 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +  L+    E              + +   +    G    N+AM +     ++ L + 
Sbjct: 76  NINQLLQQIFGEAISS-AYPDLENPPLSVTPSQQAKFGDYQCNSAMAMSQMMKAKGLKVS 134

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  I  +  ++   IAG GFIN++L  +++ K+LS+++V+G++     + K 
Sbjct: 135 PREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNFVSKLLSNVLVNGVQPP--PLQKK 192

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++GD++  L  F GYEV R  ++ D G Q   L   
Sbjct: 193 KKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEVLRLNHVGDWGTQFGMLIAH 252

Query: 181 VFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL   Y          +E   +    ++   + K    +K  + 
Sbjct: 253 LQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYKCVVKL-QSKEADFIK--AW 309

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R + + +    DI I E    +++     +  ++     +G V          
Sbjct: 310 NLICDVSRKEFQKVYNCLDISIKERGESYYQ---DMMTAVVKEFEEKGLVEVD------- 359

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   + ++++F     G  +   ++KSDG YTY  +DLA  + + ++   D +IYV
Sbjct: 360 --------EGRKIVF---APGQSIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYV 408

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
             S  + + + + A A  +     ++  +      +       K   R+GD + L  +++
Sbjct: 409 TDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLE 468

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 469 EGLKRSMDKLKEKERDKVLTPEELEKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLD-D 527

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ YA+ R RSI R A      L       +VI         E +L   +  +P
Sbjct: 528 RGNTAAYLLYAFTRIRSIARLANIQEAALRKAAETTDVI----LDHEKEWKLGKCILRFP 583

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +++  T     + L  YLY+LA+ F   +       + R       K+ M R+ L  A 
Sbjct: 584 EILQKITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQ-TGEVVKVNMWRMLLCEAT 642

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+++  G +I+G+     M
Sbjct: 643 AAVMAKGFDILGINPVQRM 661


>gi|308061669|gb|ADO03557.1| arginyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 541

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 280/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|323144078|ref|ZP_08078721.1| arginine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416154|gb|EFY06845.1| arginine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 578

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 245/610 (40%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + LKN +  +    ++ + +++ I +ER +D AHG  +TN A+IL++PL ++P  +AE
Sbjct: 5   IENLLKNAVLVLAKDHEIPENVINNIKVERAKDKAHGDFATNLALILAKPLKMNPRAVAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           L++  ++    ++   IAG GFIN ++S S+  + L  +  S +  G         V ++
Sbjct: 65  LLIKNLEPSARIEKTEIAGPGFINFFVSDSFTAEKLQEM-RSDVRLGIKEADVKDIVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    M V H R  V+GD +  ++ F G++V R  ++ D G Q   L   +  +  
Sbjct: 124 YSAPNVAKEMAVHHIRSTVIGDAVVRVLEFLGHKVIRANHVGDWGTQFGMLIAYLEEQEN 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +   + D    E +Y            A +      +F       +VK  S     K + 
Sbjct: 184 KYGTDLDLSDFEAFYRA----------AKERYDSDEDFAVLARSYVVKLQSGDEYCKKMW 233

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L  + +  +  +    + R D +     +   +    +   I+     K     D   
Sbjct: 234 QKLVKMTMDQNQKL----YDRLDVTLTEKDVMGESLYNDMLPKIVEDLMQKGIAVEDQGA 289

Query: 307 KQLLFRS--TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
             +         G+ +   + K DG Y Y   D+A  K + E    + ++Y + S    +
Sbjct: 290 VVVFLPQFKNKDGEPLGEIVRKKDGGYLYTTTDIACVKYRVETLKANRLMYFIDSRQHQH 349

Query: 364 VKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           ++   ++A         + +      + L +DG P K   R+G  + LR ++DE      
Sbjct: 350 LEAAWSIARMAGYADESVRIEHEAFGMMLGKDGKPYK--TRSGGTVKLRDLLDEAENRVT 407

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +   +V++  L +       FD+  +      N   Y+Q
Sbjct: 408 ALLDKRNSPLQGKDRDEVIHNIAIGAVKYADLSKNRMTDYVFDWDLMLSFD-GNTAPYLQ 466

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY+R RSIFR+A         ++ P  ++ QE     +E  L   L  +   +++    
Sbjct: 467 YAYSRIRSIFRKA---------EIEPGAIVLQE----EAENDLATKLLAFEDTVKSVAEK 513

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YL++L+ +F   +           +     ++   RL L    A ++  GL 
Sbjct: 514 AMPHLLCTYLFELSGIFMRFYEACPVLKGDVAL-----EIKASRLALCDLTAKVLKQGLG 568

Query: 576 IIGVESPNEM 585
           ++G+ +  +M
Sbjct: 569 LLGINTMEQM 578


>gi|308182491|ref|YP_003926618.1| arginyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064676|gb|ADO06568.1| arginyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 541

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 281/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYRDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++ +++     ++        +    ++ +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLKKSPFSKEEI--------LQTPLTDLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|195952792|ref|YP_002121082.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932404|gb|ACG57104.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 539

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/583 (33%), Positives = 304/583 (52%), Gaps = 52/583 (8%)

Query: 11  LKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +K  +KEI  K IK    +     I+ P++ ++G+ ++N A ILS+ L   P  IA  I 
Sbjct: 1   MKQLIKEIVQKTIKNLYDVEIEPQIQLPKEESYGNFASNIAFILSKALKQKPQDIAITIA 60

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL-------IGKGTK 122
             +K  P  + V  A  GF+N+ LS  +   +L   + + I Y ++        I K  K
Sbjct: 61  DNLKNLPHFEKVE-ALNGFVNMKLSSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDK 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           +N+E+VSANPTGP+H+GH R AV+GD L  L  F   +V REYYINDAG Q+N LA SV 
Sbjct: 120 INLEYVSANPTGPLHLGHGRGAVIGDVLYRLFRFFDIKVDREYYINDAGNQVNLLAKSVM 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q LY      PE  Y G Y+K + +    +++   +N   E  L  VKD+++  MM
Sbjct: 180 HYINQDLY----PFPEDGYKGDYIKDIAEAFLKEHNKSNINL--EINLERVKDFAISKMM 233

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I++ LK LN++ DI+ SE          +  +++ L  +  +                
Sbjct: 234 EDIKNTLKLLNVEFDIYFSEKTL----KDKVEKVLELLKEKNLI---------------- 273

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           +     + F+S    +D DR L KSDGSYTYFA+D+AY   KY+RG+   I + G+DH G
Sbjct: 274 EEKEGAIWFKSKD--EDKDRVLRKSDGSYTYFASDIAYHLDKYQRGYKKAIDLWGADHHG 331

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y+ RL+A   A+   +  ++V L ++V+L+ +G  ++MSKR G  + L  V++++G+D++
Sbjct: 332 YIPRLKAALEALDIPQDWLSVELFQIVKLFENGQEVRMSKRTGKMLKLIDVIEDIGADNL 391

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RFM L +K    LD D   VK Q+ ENPVFYVQYAYAR   I RQ K+ F          
Sbjct: 392 RFMFLTKKADTPLDIDINLVKAQNSENPVFYVQYAYARTMGIKRQLKEPFV--------F 443

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                +  ++  EL LI  +     V+    I ++P  +     D+A  FH  ++  +  
Sbjct: 444 GFYKDKYTYEEEELDLIKRILSSKDVLFEGVIKKDPSLVVKLSLDIAKSFHKFYNTHK-- 501

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                V  ++   T  R+ LV+A   I +   +I+ +++P  M
Sbjct: 502 -----VITSDEITTKKRISLVYATQKIFDIIFDILSIKAPEMM 539


>gi|218440177|ref|YP_002378506.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226701373|sp|B7KCT7|SYR_CYAP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218172905|gb|ACK71638.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 585

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 144/618 (23%), Positives = 250/618 (40%), Gaps = 71/618 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L     +R    LK        +   L+ +V+    +   G   +N A+ L++PL   P 
Sbjct: 4   LIEQLKTRFIQALK---TAFDQDFSDLEGLVV-PATNPKFGDYQSNVALSLAKPLKQPPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           TIAE I+  + I    +   IAG GFINL L  ++L + L + +      G        +
Sbjct: 60  TIAEQIIKALDISDLCEPPQIAGAGFINLTLKANFL-ENLLAKIQKDSRLGVEKASPSAR 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD +A ++ F G++V R  ++ D G Q   L   + 
Sbjct: 119 VIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLRLNHVGDWGTQFGMLIAYLR 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQA 240
             Y +AL   D+ L  G     Y K   +   D+   E       K     KD  ++ Q 
Sbjct: 179 EVYPEALTTADA-LNLGDLVAFYKKAKVRFDEDETFKETARKEVVKLQAGAKDTRHAWQL 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    R + + +    D+ ++E      +P  + +I+  L  +G + E        +  +
Sbjct: 238 LCDQSRREFQVIYNILDVNLTERGESFYNP-LLPEIVGQLDEEGLLTE-------DQGAK 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
              ++       +   G+ +   + KSD  Y Y   DLA  K +  E   + +IYV  + 
Sbjct: 290 CVFLEG-----FTNKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIYVTDAG 344

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + +  ++  VA         I V+     V    DG   K+  R+GD I L+ ++DE  
Sbjct: 345 QANHFAQVFQVAKKAGIIPENIEVVHVAFGVVKGEDGK--KLKTRSGDTIKLKDLIDEAV 402

Query: 417 -----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                                        VG  ++++  L +       F + K+    +
Sbjct: 403 AYARRDLEKRLAEDDRKESKDFINHVSQVVGISAIKYADLSQNRISDYVFSYDKMLAL-Q 461

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+ YAYAR +SI R+    F  LD          +    + +EL L  +L ++  
Sbjct: 462 GNTAPYMLYAYARIQSISREGNIDFEKLDEKA-------KVILSEETELALGKYLLQFTE 514

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           VIE+  I   P +L  YLY+L+  F+  + +         +++ +  +   RL L    A
Sbjct: 515 VIEDVEINLLPNRLCEYLYELSKKFNKFYENC------PVLKSEDP-IKTSRLILCDLTA 567

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G+     M
Sbjct: 568 RTLKLGLSLLGIAVVERM 585


>gi|326928305|ref|XP_003210321.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 648

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 137/621 (22%), Positives = 261/621 (42%), Gaps = 75/621 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL------GL 59
           + +SRL+             +     +V+   +    G    N+AM +++ L       +
Sbjct: 62  NINSRLQEIFGAAIQA-AYPELENPPLVVTPSQQPKFGDYQCNSAMGITQILLKTREQKV 120

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE I   I  +  ++ V IAG GFIN++L   ++ K LSS++V+G++     IGK
Sbjct: 121 SPREIAEKITKHIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLLVNGVQPP--AIGK 178

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +V ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L  
Sbjct: 179 RKRVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIA 238

Query: 180 SVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            +  ++   L       DL + +Y     +   +E   K + + +   + K    +K  +
Sbjct: 239 HLQDKFPDYLTVSPPIGDL-QAFYKESKRRFDTEEEFKKRAYQCVVLLQSKDPDFIK--A 295

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + +  + R + + +    D+ ++E    F++     ++DI+     +G+V         
Sbjct: 296 WELICDVSRKEFQKIYNCLDVTLTERGESFYQ---DMMKDIVKEFEDKGFVQVD------ 346

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                    D ++++F   + G  V   ++KSDG YTY  +DLA  + +  E   D +IY
Sbjct: 347 ---------DGRKVVF---VPGFSVPLTIVKSDGGYTYDTSDLAALRHRLLEEKGDILIY 394

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ S  S +++ + A    +      +  +      +       K   R+GD + L  ++
Sbjct: 395 VVDSGQSVHLQTVFAAGQMIGWYDPTVTRITHAAFGVVLGEDKKKFKTRSGDAVRLMDLL 454

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +E                             V    +++  L         F F K+ + 
Sbjct: 455 EEGLKRAMDKLKDKERDKVLTPEELKAAQVSVAFGCIKYADLSHNRLNDYVFSFDKMLD- 513

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
            + N   Y+ YA+ R R+I R A     ++D ++  +    +    D   E +L   +  
Sbjct: 514 DRGNTAAYLLYAFTRIRAIARLA-----NIDEEMLRKAAREEALVLDHEKEWKLGKCILR 568

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P +++        + L  YLY+LA+ F   + +     + R       K+ M RL L  
Sbjct: 569 FPEILQKILDDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQ-SGQIVKVNMWRLLLCE 627

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A A+I+  G +I+G++    M
Sbjct: 628 ATATIMAKGFDILGIKPVERM 648


>gi|291387790|ref|XP_002710413.1| PREDICTED: arginyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 660

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 130/620 (20%), Positives = 262/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +     ++   ++
Sbjct: 75  NINSRLQEVFG-CAIKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGICQMLKAKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   I  +  ++   IAG GFIN++L   ++ + LS+++V+G+      +G+ 
Sbjct: 134 PREIAENITKHIPNNEYIEKTEIAGPGFINIHLRKDFVSEQLSNLLVNGVHLP--ALGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRINHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKSPDIIK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    +I + E    F++     + D+++    +G+V          
Sbjct: 309 KLICDVSRQEFNKIYDALEISLIERGESFYQ---DRMNDVVNEFEEKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  + + + + A A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 408 VDSGQALHFQAIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLVDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELQAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA++++ G +I+G++    M
Sbjct: 641 VAAVMSKGFDILGIKPVQRM 660


>gi|317180782|dbj|BAJ58568.1| arginyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 541

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 281/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI+ L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIHLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFEQLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    ++ +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTDLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|217033390|ref|ZP_03438820.1| hypothetical protein HP9810_1g4 [Helicobacter pylori 98-10]
 gi|216944095|gb|EEC23523.1| hypothetical protein HP9810_1g4 [Helicobacter pylori 98-10]
          Length = 541

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 280/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWIAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +    +L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPKLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKICEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|90076908|dbj|BAE88134.1| unnamed protein product [Macaca fascicularis]
          Length = 660

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 259/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFGHA-IKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--AVGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    D+ + E    F++     + DI+     +G+V          
Sbjct: 309 KLICDVSRQEFNKIYDALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + + A A  +     ++  +      +       K   RAG+ + L  ++ 
Sbjct: 408 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMG 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             +    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|183221471|ref|YP_001839467.1| arginyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911558|ref|YP_001963113.1| arginyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226701381|sp|B0SB29|SYR_LEPBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226701382|sp|B0SSV1|SYR_LEPBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167776234|gb|ABZ94535.1| Arginine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779893|gb|ABZ98191.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase; ArgRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 594

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 171/606 (28%), Positives = 284/606 (46%), Gaps = 59/606 (9%)

Query: 9   SRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           + L++ +     K K++  + + +I IE  RD   G  S+  A+     L L+P  IAE 
Sbjct: 13  TELESAVSSYLTKQKIDLPLTEFKIRIEYSRDEKFGDYSSPFALENKNILKLNPKEIAEG 72

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           +++ IK +   + V  +  GFIN  +   +L +  + ++   + + +    +   + +EF
Sbjct: 73  VLSEIKNETLFEFVTFSPPGFINFRIRSQFLIQYTNQVMSPMVTFAKTD--EKQSILLEF 130

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           VSANPTGPM++   R A  GD LA+L+   G+ V RE+Y+ND G Q+  L ++V  R  +
Sbjct: 131 VSANPTGPMNIVSARSAAYGDALANLLLSLGHTVKREFYVNDYGNQVYLLGVAVLLRIFE 190

Query: 188 ALYNNDS-----------------DLPEGYYPGVYLKHVGKELAD------KYSSELLNF 224
                 S                  LP+  Y G Y++ + KE+        +    + N 
Sbjct: 191 EKGEKISFQEDESKESVFTLIEKRILPKESYRGEYIRDIAKEVLSNKTKSIQVEEWIQNK 250

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQ 283
             ++ +  +  Y+V+  +   ++DLK   +  D F SE   H  GD   +  ++      
Sbjct: 251 NWDECIHDLSKYAVEYNLSRQKEDLKLFGVHFDQFFSERSLHEAGDVENVPTLLKK---- 306

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                           +       +L F ST  GDD DR + + DG  TY  AD+AY   
Sbjct: 307 ----------------EDVSTIDGKLHFLSTQYGDDKDRVIRREDGRPTYLMADIAYHFD 350

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           KY+RGF  +I + G DH GY+ RL+    +  +      +L+ + V L  +   +KMSKR
Sbjct: 351 KYKRGFTKLIDIWGPDHYGYIARLKGAVLSFGKSNDSFLILIAQQVNLIENKEKVKMSKR 410

Query: 404 AGDFITLRHVVDEV---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
            G F T+R ++  +   G D  R+  L R +   LDFD    K++S +NPVFY+QYA+AR
Sbjct: 411 LGIFQTMRDLLSYLGKNGKDVGRYFFLMRSSDAPLDFDLDLAKDESDKNPVFYIQYAHAR 470

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             SIFR+ +    D         V+  +       L+L+  +A +   + +     EP++
Sbjct: 471 ICSIFRELQISIADWSI----PKVVSGDCFQSEERLRLLFWVARFQEEVYDTATNLEPHR 526

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YL  L+  F   +SH  ++ R++  Q   R+     L L+      I SGL ++G+ 
Sbjct: 527 LTNYLQSLSKAFTKFYSH--KDNRIKEKQGEEREQL---LFLILFTKRAIASGLELLGIS 581

Query: 581 SPNEMS 586
           SP +MS
Sbjct: 582 SPEKMS 587


>gi|90077474|dbj|BAE88417.1| unnamed protein product [Macaca fascicularis]
          Length = 660

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 134/620 (21%), Positives = 260/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFGHA-IKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--AVGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    D+ + E    F++     + DI+     +G+V          
Sbjct: 309 KLICDVSRREFNKIYDALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + + A A  +     ++  +      +       K   RAG+ + L  ++ 
Sbjct: 408 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMG 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             +  D +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYDCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|109079690|ref|XP_001091294.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 660

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 259/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFGHA-IKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--AVGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    D+ + E    F++     + DI+     +G+V          
Sbjct: 309 KLICDVSRQEFNKIYDALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + + A A  +     ++  +      +       K   RAG+ + L  ++ 
Sbjct: 408 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMG 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             +    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|298491056|ref|YP_003721233.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232974|gb|ADI64110.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 585

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 243/613 (39%), Gaps = 67/613 (10%)

Query: 8   SSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +LK  L + +      E   +D I++    +   G    N A+ LS+ LG+    IA 
Sbjct: 5   QEKLKLKLAQALVAAFGAEYTGVDPILVTAS-NPKFGDFQANVALSLSKKLGMQARVIAS 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            IV ++ +        IAG GFINL L  SYL   L++I       G        K  ++
Sbjct: 64  AIVEKLDVSDICKPPEIAGPGFINLRLQTSYLESQLNAIKTD-SRLGVPKTKNSQKEIVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GD +A ++ F G+EV R  ++ D G Q   L   +   Y 
Sbjct: 123 FSSPNIAKEMHVGHLRSTIIGDCIARILEFHGHEVLRLNHVGDWGTQFGMLITYLREVYP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMKI 244
           +AL   ++ L  G     Y +   +  AD+   E       +    V+D  ++ + + + 
Sbjct: 183 EALTTANA-LDIGDLVTFYRQAKQRFDADETFQETARQEVVRLQAGVEDTLHAWKLLCEQ 241

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R + + +    ++ + E      +P  +  ++++L + G + E        +  +   +
Sbjct: 242 SRREFQVIYDLLNVNLIERGESFYNP-FLPAVVEDLEKTGLLEEN-------QGAKCVFL 293

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGY 363
           D       +   G+ +   + KSDG Y Y   DLA  + + E+     +IYV  +  + +
Sbjct: 294 DG-----FTNREGEPLPLIIQKSDGGYNYATTDLACLRYRIEKDQAKRIIYVTDAGQANH 348

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
             +   +A   +     + ++      L       K   R+GD + LR ++DE       
Sbjct: 349 FTQFMQLAKKANWIPDDVELVHVPFG-LVLGDNRKKFKTRSGDTVRLRDLLDEAVSRTRA 407

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    F + K+    K N   
Sbjct: 408 DLEARLIEEGREETEEFIKNVAEVVGISAVKYADLSQNRTSNYVFSYDKMLAL-KGNTAP 466

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R + I R+    F +L  D        +    + +EL L   L +   VI   
Sbjct: 467 YMLYAYVRTQGISREGNIDFENLGTD-------TKILLKEDAELTLAKDLLQLDEVISEV 519

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P +L  YLY+L+  F+  + +    P L+    +       RL L    A  +  
Sbjct: 520 EQDLLPNRLCDYLYNLSDKFNKFYENC---PVLK----SEEPTRTSRLMLCDLTAKTLKL 572

Query: 573 GLNIIGVESPNEM 585
           GL+++G++    M
Sbjct: 573 GLDLLGIKVLERM 585


>gi|330899266|gb|EGH30685.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 578

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 234/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  + GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIFGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 THFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKASGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|57168053|ref|ZP_00367192.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020427|gb|EAL57096.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 497

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 161/537 (29%), Positives = 279/537 (51%), Gaps = 42/537 (7%)

Query: 49  AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108
            A  L++ L   P++IA  + A+ +     D V  A  G++N  LS ++L ++ +  + +
Sbjct: 1   MAFSLAKELRKSPISIANELAAKFQEHSYFDKVE-ALNGYLNFRLSKTFLNELANKALQN 59

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             E+ +    K     +E+VSANPTGP+H+GH R AV GDTL  L    GY+   EYY+N
Sbjct: 60  PNEFSKGE-DKTESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 118

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           DAG QI  L LS+    ++++ + + + PE YY G Y+  + KE  +K+  E  +   E+
Sbjct: 119 DAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFS---EE 175

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            +P + D++   M+ +I+ +L+   I+ D ++SE  ++      +   +++L     +YE
Sbjct: 176 NIPSLADWAKDKMLVLIKQNLEQAKIKIDNYVSERSYY----DALNATLESLKEHKGIYE 231

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                              ++   S++ GD+ DR +++ DG  TY AAD+ Y K K  RG
Sbjct: 232 ----------------QEGKIWLASSLKGDEKDRVIIREDGRGTYLAADIVYHKDKMSRG 275

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +   I + G+DH GY+ R++A    +      + ++L ++V L +DG P KMSKRAG+FI
Sbjct: 276 YGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFI 335

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            +  VVDE+GSD++R++ L +K    L+FD   ++++   NPV+Y+ YA+AR   +F +A
Sbjct: 336 LMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKA 395

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                D+                +   + L+        V+ +A  A+   K+  YL +L
Sbjct: 396 GKKIDDVMKADLQS--------LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNL 447

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ FH  ++  +         AN   L    L+L   VA  I +  +++G+E+ N+M
Sbjct: 448 AANFHKFYNENKV-----VGSANENDL----LKLFSLVALSIKTAFSLMGIEAKNKM 495


>gi|90077298|dbj|BAE88329.1| unnamed protein product [Macaca fascicularis]
          Length = 588

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 259/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 3   NINSRLQEVFGHA-IKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 61

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 62  PREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--AVGEN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 120 KKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 179

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 180 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AW 236

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    D+ + E    F++     + DI+     +G+V          
Sbjct: 237 KLICDVSRQEFNKIYDALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD------- 286

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 287 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + + A A  +     ++  +      +       K   RAG+ + L  ++ 
Sbjct: 336 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMG 395

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             +    +++  L         F F K+ +  
Sbjct: 396 EGLKRSMDKLKEKERDKVLTAEELNVAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-D 454

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 455 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRF 509

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 510 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEA 568

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 569 VAAVMAKGFDILGIKPVQRM 588


>gi|71895355|ref|NP_001025778.1| arginyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|82082785|sp|Q5ZM11|SYRC_CHICK RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|53127806|emb|CAG31232.1| hypothetical protein RCJMB04_3h11 [Gallus gallus]
          Length = 661

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 137/621 (22%), Positives = 259/621 (41%), Gaps = 75/621 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS------RPLGL 59
           + +SRL+             +     +V+   +    G    N+AM ++      +   +
Sbjct: 75  NINSRLQEIFGAAIQA-AYPELENPPLVVTPSQQPKFGDYQCNSAMGITQILLKTKEQKV 133

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE I   I  +  ++ V IAG GFIN++L   ++ K LSS++V+G++     IGK
Sbjct: 134 SPREIAEKITKHIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLLVNGVQPP--AIGK 191

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L  
Sbjct: 192 RKKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIA 251

Query: 180 SVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            +  R+   L       DL + +Y     +   +E   K + + +   + K    +K  +
Sbjct: 252 HLQDRFPDYLTVSPPIGDL-QAFYKESKRRFDTEEEFKKRAYQCVVLLQSKDPDFIK--A 308

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + +  + R + + +    D+ ++E    F++     ++DI+     +G+V         
Sbjct: 309 WELICDVSRKEFQKIYNCLDVTLTERGESFYQ---DMMKDIVKEFEDKGFVQVD------ 359

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                    D ++++F   + G  V   ++KSDG YTY  +DLA  + +  E   D +IY
Sbjct: 360 ---------DGRKIVF---VPGFSVPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIY 407

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ S  S +++ + A    +     ++  +      +       K   R+GD + L  ++
Sbjct: 408 VVDSGQSVHLQTVFAAGQMIGWYDPKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLL 467

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +E                             V    +++  L         F F K+ + 
Sbjct: 468 EEGLKRAMDKLKDKERDKVLTPEELKAAQMSVAFGCIKYADLSHNRLNDYVFSFDKMLD- 526

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
            + N   Y+ YA+ R R+I R A     ++D  +  +    +    D   E +L   +  
Sbjct: 527 DRGNTAAYLLYAFTRIRAIARLA-----NIDEGMLRKAAREEVIVLDHEKEWKLGKCILR 581

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P +++        + L  YLY+LA+ F   + +     + R       K+   RL L  
Sbjct: 582 FPEILQKILDDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQ-SGQIMKVNTWRLLLCE 640

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A A+I+  G +I+G++    M
Sbjct: 641 ATATIMAKGFDILGIKPVERM 661


>gi|91794705|ref|YP_564356.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060581|sp|Q12IU3|SYR_SHEDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91716707|gb|ABE56633.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 581

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/614 (21%), Positives = 248/614 (40%), Gaps = 72/614 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++    +  V      RI ++R +D  HG L+TN AM+L++  G +P  +A+
Sbjct: 5   IESLLEQTIESFKNQGIVPADFQARIQVDRTKDKTHGDLATNLAMMLTKVAGKNPRELAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +     V  V IAG GFIN ++  + L   L   +    E+    + +   + ++
Sbjct: 65  LIIDNLPPSSHVAKVEIAGPGFINFFIDDNALATQLEQALND--EHFGITLPEPQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
              +      SDL E +Y    L+            E  +F       +V   S      
Sbjct: 183 ANGEQAQLELSDL-ETFYRAAKLRF----------DESTDFATRARQLVVALQSGDEYCN 231

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +  +   +++ H      D + R   S  R  +   +      E ++    +K     +
Sbjct: 232 KLWQEFNDISLSHCH----DVYERLGVSLTRADVHGESAYNADLEQVVKDLDAKGL-LSE 286

Query: 304 MDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
            +  +++F+    T  G+ +   + K+DG Y Y  +DLA  + + +    D  +Y +   
Sbjct: 287 SNGAKVVFQEAFRTKEGEPLPVIIQKADGGYLYATSDLAAMRYRSKVLKADRALYFVDLR 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + + +++ ++A      +  + +       +   DG P K   R+G  + L  ++DE  
Sbjct: 347 QALHFQQVFSLAKLAKFVRKDMQLEHNGFGTMNGEDGRPFK--TRSGGVVKLVDLLDEAN 404

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  SV++  L +  +    F F ++    + N  
Sbjct: 405 NRALELVRSKNPDMDEATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQMLSF-EGNTA 463

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YAY R   IF++A+      D DL    ++ +       E +L   LA++   +  
Sbjct: 464 PYLLYAYTRVAGIFKRAE------DIDLTDAKIVLE----HDKEKELATKLAQFGETLYK 513

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
            T   +P  L  YLY+LA  F   +           + A+       RL L    A+ +N
Sbjct: 514 MTDKAQPNMLCNYLYELAGAFSSFYEAC------PVLAADTPAQQGSRLLLAKLTANTLN 567

Query: 572 SGLNIIGVESPNEM 585
            GL+++G+E+   M
Sbjct: 568 KGLSLLGIETLERM 581


>gi|261867613|ref|YP_003255535.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412945|gb|ACX82316.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 577

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 233/617 (37%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +       +         ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQSILSEKIKQAMLAAGADAQCNA------LVRQSGKVQFGDYQANGIMPAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+L++A+ ++    +   IAG GFIN++L   +L + + + V              
Sbjct: 55  PREFAQLVLAKAELQDIAEKTEIAGPGFINIFLKDGWLAENIGNAVKDSKLGIH--HQDK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMENEHASEMELSDLEAFYRA----------AKKHYDEDPVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +  GI+   K +   
Sbjct: 223 YCRTMWQKLVKITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLPGIVEGLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   +++        G  +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 VED-DGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +            +      + L +DG P K   R+GD + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFK--TRSGDTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +       FD+  +    + 
Sbjct: 396 EAIERAGVLISQKSTALSEQEKADVIEAVGIGSVKYADLSKNRITDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +++    ++                +  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNRSQISPGEVKQAPLT--------LTNEKERALAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+       P+ L  YLY+LA VF   + H         +   ++++ + RL+L      
Sbjct: 507 IQLVAKDGTPHILCAYLYELAGVFSSFYEHC------PILNNEDQQVKLSRLKLALLTER 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++   M
Sbjct: 561 TLKQGLDLLGIKTIERM 577


>gi|157165706|ref|YP_001467379.1| arginyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166232770|sp|A7ZF21|SYR_CAMC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112801951|gb|EAT99295.1| arginyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 527

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 167/565 (29%), Positives = 283/565 (50%), Gaps = 43/565 (7%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           K ++ K +    V+E+P+D    H +T     L++ L   P  IA     +      V++
Sbjct: 6   KAEISKVLEREFVLEKPKDKNLAHYATPL-FSLAKELRKSPAMIASEFADKFSDSKIVEA 64

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
              A  G++N  L   +L +I   I++    + +    K     IE++SANPTGP+H+GH
Sbjct: 65  --SAVNGYLNFKLKSEFLDEISKQILLDSENFAKEDA-KKDSYLIEYISANPTGPLHIGH 121

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R AV GDTLA L    GY ++ EYYINDAG QI+ L  S+    ++ L+N     PE Y
Sbjct: 122 VRGAVYGDTLARLGKRLGYAISTEYYINDAGNQIDLLGTSISLAAKEQLFNESVVYPEKY 181

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           Y G Y+  + K   +K+  E+  F +E     + ++    +++II+ DL  + I  + + 
Sbjct: 182 YRGDYILDIAKLANEKFGKEI--FYDESRNLELAEFGKDIVLEIIKKDLADVGIFIESWA 239

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           SE   + G    +   I+ L R   +YE                        ST +GDD 
Sbjct: 240 SEKALYDG----LEPTINKLKRSNQMYE----------------KEGATYIASTTLGDDN 279

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           DR ++++DG  TY A D+ Y   K+E+ FD+ I + G+DH GY+ RL+A    +   + +
Sbjct: 280 DRVVVRNDGRPTYLAGDIIYHNAKFEKNFDHYINIWGADHHGYIARLKAAINFLGYDENR 339

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
           + V+L ++V L ++G P KMSKRAG+ + +  +  E+G++++RF+ + + N+  L+FD  
Sbjct: 340 LEVILMQMVSLLKEGKPYKMSKRAGNAVLMSDIASEIGAEALRFIFISKANTSSLEFDVD 399

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++K++   NP+FY+ YA+AR   IF +A     D+        +       D +   L+ 
Sbjct: 400 ELKKEDSSNPIFYINYAHARINQIFAKAGKSVSDV--------INADFECLDENSKNLLF 451

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
                P ++E+A  +++  K+  YL  LA+ FH  ++  R       V   N       L
Sbjct: 452 EALILPEILEDAFASRQLQKIPDYLKSLAASFHKFYNENR------VVGNENED---SLL 502

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           ++   VA  I +  NI+G+ + + M
Sbjct: 503 KVFAVVAVSIKTAFNIMGITAKDRM 527


>gi|307637012|gb|ADN79462.1| arginyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 541

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/572 (28%), Positives = 281/572 (49%), Gaps = 41/572 (7%)

Query: 19  DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78
             K  +E+ +   ++IE P+D  HGH +T  A  L++     PL IAE +  +I      
Sbjct: 4   LIKGVLEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKT 63

Query: 79  DSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTG 134
              F   +A KG+IN  LS  +L +     +    ++G      +  K+ +EFVSANPTG
Sbjct: 64  QGFFDSVVACKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTG 123

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
           P+H+GH R AV GD+LA +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +     
Sbjct: 124 PLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESV 183

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             PE +Y G Y+  + K+  +     L    EE  + ++  Y+   M+  I+ +L AL I
Sbjct: 184 TYPEVFYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGI 243

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D + SE +  +        + + L R   +YE                   ++  +S+
Sbjct: 244 HFDSYASEREIFKHK----DAVFERLERANALYE----------------KDSKIWLKSS 283

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
           +  D+ DR L+K D SYTY A D+ Y   K+++ +   I + G+DH GY+ R++A    +
Sbjct: 284 LYQDESDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFL 343

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                ++ VLL ++VRL +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    
Sbjct: 344 GYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTH 403

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+FD   +K+Q   NP++Y+ YA +R  ++  ++     ++                +  
Sbjct: 404 LEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEI--------WQTPLKNLNAE 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+      P+ +E++       K   Y   LAS FH  ++ G+           +  
Sbjct: 456 EKYLLFSALSLPKAVESSFEEYGLQKKCEYAKTLASEFHRFYNAGKIL---------DTP 506

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
                L++   V+  + +   ++G+E   ++S
Sbjct: 507 KAKELLKICLMVSLSLTNAFKLLGIEIKTKIS 538


>gi|330977161|gb|EGH77119.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 578

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 235/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKASGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYAPTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|330938645|gb|EGH42211.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 578

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 234/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++  G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKSAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D ++Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLGSA-----FDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|308063179|gb|ADO05066.1| arginyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 541

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 280/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  +++
Sbjct: 474 FEECGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|262118273|ref|NP_080212.2| arginyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|20178137|sp|Q9D0I9|SYRC_MOUSE RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|18043638|gb|AAH20132.1| Arginyl-tRNA synthetase [Mus musculus]
 gi|26345154|dbj|BAC36226.1| unnamed protein product [Mus musculus]
 gi|56205734|emb|CAI24388.1| arginyl-tRNA synthetase [Mus musculus]
 gi|74208028|dbj|BAE29127.1| unnamed protein product [Mus musculus]
 gi|148684328|gb|EDL16275.1| arginyl-tRNA synthetase [Mus musculus]
          Length = 660

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S++V+G++     +G  
Sbjct: 134 PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPV--LGDK 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++ ++      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  R     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|74207302|dbj|BAE30837.1| unnamed protein product [Mus musculus]
          Length = 608

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 23  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 81

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S++V+G++     +G  
Sbjct: 82  PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPV--LGDK 139

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 140 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 199

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   K + + +   + K   I+K  + 
Sbjct: 200 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AW 256

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 257 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 306

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 307 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 355

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++ ++      +       K   R+G+ + L  +++
Sbjct: 356 VDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 415

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 416 EGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 474

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  R     +   D   E +L   +  +
Sbjct: 475 RGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRF 529

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 530 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 588

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 589 VAAVMAKGFDILGIKPVQRM 608


>gi|332673163|gb|AEE69980.1| arginine--tRNA ligase [Helicobacter pylori 83]
          Length = 541

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 280/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI+ L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIHLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY  R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYTARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|74212414|dbj|BAE30955.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S++V+G++     +G  
Sbjct: 134 PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPV--LGDK 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++ ++      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  R     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|293392120|ref|ZP_06636454.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952654|gb|EFE02773.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 577

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 119/617 (19%), Positives = 234/617 (37%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +       +         ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQSILSEKIKQAMLAAGADAQCNA------LVRQSGKVQFGDYQANGIMPAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+L++++ ++    +   IAG GFIN++L   +L + + + V              
Sbjct: 55  PREFAQLVLSKAELQDIAEKTEIAGPGFINIFLKDGWLAENIGNAVKDSKLGIH--HQDK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTVVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMENEHASEMELSDLEAFYRA----------AKKHYDEDPVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +  GI+   K +   
Sbjct: 223 YCRTMWQKLVKITMQQNQH----NYDRLNVTLAEKDVMGESLYNPMLPGIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D   +++        G  +   + K DG + Y   D+A  K +YE       +   
Sbjct: 279 VED-DGAWVVYLDEFKNKDGGPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKASRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +            +      + L +DG P K   R+GD + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFQLEYKNFGMMLGKDGKPFK--TRSGDTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  SV++  L +       FD+  +    + 
Sbjct: 396 EAIERAGVLISQKSTALSEQEKADVIEAVGIGSVKYADLSKNRITDYVFDWDNMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R RSIF +++    +++            +  +  E  L + L ++   
Sbjct: 455 NTAPYMQYAYTRIRSIFNRSQINPAEVEQASL--------TLTNEKERALAIKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+       P+ L  YLY+LA VF   + H         +   ++++ + RL+L      
Sbjct: 507 IQLVAKDGTPHILCAYLYELAGVFSSFYEHC------PILNNEDQQVKLSRLKLALLTER 560

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+++   M
Sbjct: 561 TLKQGLDLLGIKTVERM 577


>gi|320330828|gb|EFW86802.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 578

 Score =  418 bits (1076), Expect = e-114,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 234/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPSDEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D + Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVQYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|319637713|ref|ZP_07992479.1| arginyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400868|gb|EFV81523.1| arginyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 572

 Score =  418 bits (1076), Expect = e-114,   Method: Composition-based stats.
 Identities = 120/618 (19%), Positives = 240/618 (38%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+           +E              +V++  ++  HG    N  M  ++    +
Sbjct: 1   MNLYQTVE-------REAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL LSP +L + + + +     +G     K 
Sbjct: 54  PRELAQKVAEALADNAVIESAEVAGPGFINLRLSPEFLAQNIQTALND-ARFGIAKTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ ++ F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNNVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVQKGLAIE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +  R   D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L   +              +     + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFTTSRKAGYLPEHAKAEFIGFGTMMGKDGKPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            E                           VG  +V++  L +  +    FD+  +    +
Sbjct: 394 TEAVERATALVKEKNPELGADEAGKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A +            +        +  E QL   L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAGEW-----------DATAPTVLTEPLEKQLAAELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++      P+ LA YLY +A++F   +           +  +       RLQL     
Sbjct: 502 VLQSVADTVYPHYLAAYLYQIATLFSRFYEAC-------PILKSEGATRNSRLQLAKLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G++  + M
Sbjct: 555 DTLKQGLELLGIDVLDVM 572


>gi|158631214|ref|NP_001099247.2| arginyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|300669674|sp|P40329|SYRC_RAT RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|171846737|gb|AAI61929.1| Arginyl-tRNA synthetase [Rattus norvegicus]
          Length = 660

 Score =  418 bits (1076), Expect = e-114,   Method: Composition-based stats.
 Identities = 134/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        K          +V+   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQELFG-CAIKAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLPV--LGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + E +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++   +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFNKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQATHFQTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLRRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  R     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQRAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|52425385|ref|YP_088522.1| arginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386992|sp|Q65SX3|SYR_MANSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52307437|gb|AAU37937.1| ArgS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 576

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 125/618 (20%), Positives = 237/618 (38%), Gaps = 75/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +     +   E       ++ +      G    N  M  ++ LGL+
Sbjct: 1   MNIQWILSDKIKRAMIAAGAEQNAEP------LVRQSGKPQFGDYQANGIMGAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++ ++ +    +   IAG GFIN++L+ +++ +   + + +     +      
Sbjct: 55  PREFAQKVLEQVDLSDIAEKTEIAGPGFINIFLNKNWVAQQADTALNTPNFGIKTA--HP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G  V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARALEFMGNHVIRANHVGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSV 238
           +     + A     SDL   Y          +E A K  S ++     +++   +    V
Sbjct: 173 LEKMENEHADAMQLSDLEAFYRAAKETYDNDEEFAVKARSYVVKLQSGDEYCRTMWKKLV 232

Query: 239 QAMMKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M+  + + + LN+       + E  ++   P+    I+++L +QG   E        
Sbjct: 233 DMTMQQNQRNYERLNVTLTEKDVMGESLYNPMLPA----IVEDLKKQGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D  +        GD +   + K DG + Y   D+A  K +Y     D  +  
Sbjct: 282 DGALVVYLDEFK-----NKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYHTLHADRALVF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  S ++++   +           ++      + L +DG P K   R+G  + L  ++
Sbjct: 337 SDTRQSQHMQQAWLITRKAGYVPDSFSLEHHNFGMMLGKDGKPFK--TRSGGTVKLADLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   SV++  L +  +    FD+  +    +
Sbjct: 395 DEAVERATLLINEKNTALSEQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSF-E 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +        D +    +    E   D  E  L + L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFNK-------TDVNPTALSAAHIEIRND-KERALAIKLLQFEE 505

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++       P+ L  YLY+LA VF   + H         + A    + + RL+L     
Sbjct: 506 AVQTVAKDGTPHILCNYLYELAGVFSSFYEHC------PILNAEEP-VKLSRLKLAKLTE 558

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G+++  +M
Sbjct: 559 KTLKQGLDLLGIKTVEKM 576


>gi|161870367|ref|YP_001599537.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595920|gb|ABX73580.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 581

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 120/623 (19%), Positives = 243/623 (39%), Gaps = 80/623 (12%)

Query: 1   MYL-----FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55
           M L     F +    +++   E              +V++  ++  HG    N  M  ++
Sbjct: 1   MNLTERPNFMNLHQTVEH---EAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVMGAAK 57

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               +P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +     +G  
Sbjct: 58  KAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALND-ARFGVA 116

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              K   V I++ S N    MHVGH R +++GD+++ ++ F G  V R+ ++ D G Q  
Sbjct: 117 KTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVGDWGTQFG 176

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIV 233
            L   +  + +       +DL + Y             AD     ++     +E  L + 
Sbjct: 177 MLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALW 236

Query: 234 KDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K +   ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E   
Sbjct: 237 KQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQAVVDDLVQKGLAVE--- 288

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
                   +   +D  +        G+     + K  G + Y + DLA  + +      D
Sbjct: 289 ----DDGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHAD 339

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFIT 409
            ++YV+    + + ++L   +         +          + +DG P K   R+GD + 
Sbjct: 340 RLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK--TRSGDTVK 397

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  ++ E                           VG  +V++  L +  +    FD+  +
Sbjct: 398 LVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+QYAY R +S+FR+A +   +                 +  E QL   L
Sbjct: 458 LSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAP-----------TVLTEPLEKQLAAEL 505

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++  V+++      P+ LA YLY +A++F   +           ++A        RLQL
Sbjct: 506 LKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEAC------PILKAEGAS-RNSRLQL 558

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
                  +  GL+++G++  + M
Sbjct: 559 AKLTGDTLKQGLDLLGIDVLDVM 581


>gi|301766472|ref|XP_002918656.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 660

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 131/620 (21%), Positives = 258/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +S+L+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSQLQEVFG-CAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQILKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 PREIAENITRHLPDNECVEKVEIAGPGFINVHLRKDFVSQQLTNLLVNGVKLP--ALGEY 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEDFKKRAYQCVVLLQSKNPDIIK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    DI + E    F++     + DI++    +G+V          
Sbjct: 309 KLICDVSRQEFNRIYGALDISLIERGESFYQ---DRMNDIVEEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + +   A        ++  +      +       K   R+G+ + L  +++
Sbjct: 408 VDSGQSVHFQTIFGAAQMAGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEGMLQKAAQETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGQVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++    +I+G++    M
Sbjct: 641 VAAVMAKAFDILGIKPVQRM 660


>gi|78777988|ref|YP_394303.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|109895052|sp|Q30PL3|SYR_SULDN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78498528|gb|ABB45068.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 527

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 176/563 (31%), Positives = 295/563 (52%), Gaps = 44/563 (7%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83
           + +K    +++E+PRD + GH +T  A  L++ L   P+ IA+ I +  + +     V  
Sbjct: 5   LREKFGREVILEKPRDRSFGHFATPIAFALAKELKQSPMKIADEIASSFEDNNIFSRVE- 63

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           + KG++N  LS ++L +  S  + +   + +    K  K+ +EFVSANPTGP+H+GH R 
Sbjct: 64  SVKGYLNFRLSENFLSEYGSWALENPQTFAKQE--KKEKILLEFVSANPTGPLHIGHARG 121

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           AV GDTL  L    GY++T EYY+NDAG QI+ L LS+    ++ + +     PE YY G
Sbjct: 122 AVYGDTLFRLARHLGYDITAEYYVNDAGNQIDLLGLSIQLYGRENILHESVKYPESYYRG 181

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            YL  +  E   K+  E+L+  +E     +  ++   +M+II+ DL   NI  D F+ E 
Sbjct: 182 EYLAPLAHEAIKKFGLEILS--DESRQKELALWAKDGVMEIIKKDLANTNIFFDTFVYES 239

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
             +      +  + D + ++                        +L   S++ GDD DR 
Sbjct: 240 TLYDDWDRVMAKMGDGIYKK----------------------DDKLFIASSLKGDDDDRV 277

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +++ D   TY A D+ Y   K+ERG+D+ I + G+DH GY+ R++A    +    A++ V
Sbjct: 278 VVREDARPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIARVKASVEFLGYDSAKLEV 337

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL ++V L +DG P KMSKRAG+ I +  +V+E+GSD++RF+   +K+   L+FD  + K
Sbjct: 338 LLSQMVSLLKDGEPYKMSKRAGNVILMSDIVEEIGSDALRFIFASKKSDTALEFDLAEFK 397

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +Q   NP+FY+QYA+AR ++I  ++     DL  D      +      D S   L+    
Sbjct: 398 KQDSSNPIFYIQYAHARIKTIIAKS-----DLSHDEIMSATL---KNLDESADMLMFDAL 449

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P ++E+A I+++  KL  YL  LA+  H  +   R       +   +    +   +L+
Sbjct: 450 LLPEIVEDAFISRQVQKLPEYLKSLAASLHKFYYDCR------IIGTADEAKLL---KLL 500

Query: 564 HAVASIINSGLNIIGVESPNEMS 586
             V   + +GL ++G+E+ + MS
Sbjct: 501 MLVGLSLKTGLALMGIEAKDYMS 523


>gi|315586310|gb|ADU40691.1| arginine--tRNA ligase [Helicobacter pylori 35A]
          Length = 541

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 278/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G     +   K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|296192722|ref|XP_002744196.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 660

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 131/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQQVFGRA-IKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              IAE I   +  +  ++ V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 TREIAENITKHLPDNEYIEKVEIAGPGFINVHLRKDFVSEQLTNLLVNGVKLP--ALGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L      SDL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPISDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDIIK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R +   +    D+ + E    F++     + D++     +G+V          
Sbjct: 309 NLICDVSRQEFNKIYEALDVTLVERGESFYQ---DRMNDVVKEFEDRGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + + A A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 408 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKQRDKVLTAEELDAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|213514264|ref|NP_001133937.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209155884|gb|ACI34174.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 660

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 134/630 (21%), Positives = 250/630 (39%), Gaps = 88/630 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----R 55
           M +           ++E    ++        + +   +    G    N+AM ++     +
Sbjct: 74  MNINQRLQEIFGEAIREAWPDLENPP-----LAVTPNQQAKFGDYQCNSAMAMAQMMKSK 128

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            L ++P  IAE I   I  +  ++   IAG GFIN++L  S++ K+L++++++G++    
Sbjct: 129 GLKVNPREIAEKIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLLNGVQPP-- 186

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            + +  KV ++F S N    MHVGH R  ++GD++  L  F GY+V R  ++ D G Q  
Sbjct: 187 PLERKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWGTQFG 246

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L   +  ++   L  +    P G     Y +      + K   E  +F +  +  +VK 
Sbjct: 247 MLIAHLQDKFPNYLTVSP---PIGDLQAFYKE------SKKRFDEEEDFKKRAYQCVVKL 297

Query: 236 YS--------VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGY 285
            S           +  + R + + +    DI I E    F++     +  ++     +G 
Sbjct: 298 QSKDPAFIKGWNLICDVSRKEFQKVYNCLDIQIIERGESFYQ---EKMIAVVKEFEAKGL 354

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344
           V                +MD  + +  +   G  +   ++KSDG YTY  +DLA  + + 
Sbjct: 355 V----------------EMDEGRKIVFAP--GQQIPLTVVKSDGGYTYDTSDLAALRQRL 396

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           ++   D +IYV  S  + + + + A A  +     ++  +      +       K   R+
Sbjct: 397 FDEKADIIIYVTDSGQATHFQVVFAAAQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRS 456

Query: 405 GDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELL 435
           GD + L  ++DE                             V    +++  L        
Sbjct: 457 GDTVRLMDLLDEGLKRSMDKLKEKDRDKVLSTEELTKAQHSVAFGCIKYADLSHNRINDY 516

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F F K+ +  + N   Y+ YA+ R RSI R A      L       +V+ Q       E
Sbjct: 517 VFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIDEVALRKAAETTDVLLQ----HDKE 571

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L   L  +P +++        + L  YLY+LA+ F   +       + R       K+
Sbjct: 572 WKLGKCLMRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDSCYCIEKDRQ-TGEVVKV 630

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            M R+ L  A A+I+  G +I+G+   + M
Sbjct: 631 NMWRMLLCDATAAIMAKGFDILGINPVSRM 660


>gi|209695554|ref|YP_002263483.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238065084|sp|B6EI57|SYR_ALISL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|208009506|emb|CAQ79795.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 577

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 127/622 (20%), Positives = 234/622 (37%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQSLINDKVSQALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKRLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +              
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADERLGVALET--K 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G+ VTR  +I D G Q   L  +
Sbjct: 113 QNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVTRANHIGDWGTQFGMLIAN 172

Query: 181 V--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------FPEEKWLPI 232
           +    + +  +    SDL   Y     L    +E A      ++       F  + W  +
Sbjct: 173 LERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTARGYVVKLQGGDAFCADMWKKL 232

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V    VQ      R     +++  D  + E  ++    S +  I+ +L  +G   E    
Sbjct: 233 VDVTMVQNQRNYDRL---NVSLTRDNVMGESMYN----SMLAPIVADLQEKGLAVE---- 281

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
              S   Q   +D  +        GD +   + K DG + Y   D+A  K ++E    D 
Sbjct: 282 ---SDGAQVVYLDEYK-----NKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELNADR 333

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          +++      + L +DG P K   RAG  + L
Sbjct: 334 VLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRL 391

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           V   +V++  L +  +    FD+  + 
Sbjct: 392 ADLLDEAEQRAIALIEEKNKDLSTEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNIL 451

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  SIF +A         DL   N+  +    D  E  LI  L 
Sbjct: 452 -AFEGNTAPYMQYAYTRVASIFSKA---------DLSMDNLAGEVKITDEKEKALITKLM 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   ++      +P+ +  YL++LA  F   +           +  ++  +   RL+L 
Sbjct: 502 QFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEAC------PILNNDDESIKQSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  I  GL+++G+E+   M
Sbjct: 556 ALTAKTIKQGLDLLGIETLERM 577


>gi|254229698|ref|ZP_04923107.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937743|gb|EDN56592.1| arginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 545

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 123/582 (21%), Positives = 225/582 (38%), Gaps = 72/582 (12%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
               G    N  M +++ LG +P   A+ ++  + +D       IAG GFIN++LS  +L
Sbjct: 1   KPQFGDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFL 60

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   + +            +   +  ++ + N    MHVGH R  ++GD +   + F G
Sbjct: 61  AKQADAALADERLGVAKE--EAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLG 118

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           ++V R  +I D G Q   L  ++    Q+   +    +DL   Y     L    +E A K
Sbjct: 119 HKVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 178

Query: 217 YSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSP 272
             + ++     +E    + K      M++  R+    LN+    D  + E  ++      
Sbjct: 179 ARNYVVKLQSGDEYCAEMWKKLVDVTMIQNQRN-YDRLNVSLTRDDVMGESMYN----DM 233

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +  I+ +L  QG   E           Q   +D  +        G+ +   + K DG + 
Sbjct: 234 LPKIVADLKEQGLAVE-------DDGAQVVFLDEYK-----NKDGEPMGVIVQKRDGGFL 281

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVR 390
           Y   D+A  K +YE    D ++Y + S    ++ +   +          +++      + 
Sbjct: 282 YTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMM 341

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L +DG P K   RAG  + L  ++DE                           V   +V+
Sbjct: 342 LGKDGKPFK--TRAGGTVRLADLLDEAEVRAAQLIESKNPELDAEEKEKISKTVAMAAVK 399

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R  SIF +A      L  D+    
Sbjct: 400 YSDLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASIFAKAGVAMDALQGDI---- 454

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   D  E  LI  L ++   +++     +P+ +  YL++LA  F   +       
Sbjct: 455 -----KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSYLFELAGQFSSFYEAC---- 505

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A +  +   RL+L    A  I  GL+++G+++   M
Sbjct: 506 --PILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTLERM 545


>gi|74141610|dbj|BAE38569.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S++V+G++     +G  
Sbjct: 134 PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPV--LGDK 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   K + + +   + K   I+K  + 
Sbjct: 252 MQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++ ++      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  R     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDNLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|261858632|dbj|BAI45838.1| arginyl-tRNA synthetase [synthetic construct]
          Length = 660

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 130/624 (20%), Positives = 260/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGYIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|56461560|ref|YP_156841.1| arginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81362378|sp|Q5QV46|SYR_IDILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56180570|gb|AAV83292.1| Arginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 580

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 131/616 (21%), Positives = 252/616 (40%), Gaps = 69/616 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       L   + ++  +  +       I ++RPRD +HG  +TN A++L++P   +P 
Sbjct: 1   MKEQLEQLLAEAIGQLKAQGTIPADHSVNIQLDRPRDKSHGDFATNLALMLAKPAKSNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IVA +  +  +  + IAG GFIN  +S   L+  L++++ S      ++  +   
Sbjct: 61  QLAEAIVAAVPENSLLSKMDIAGPGFINFTISQDQLKDQLTAMLNSD-SLNVDVAEESKT 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I++ S N    MHVGH R A++GD ++ +  F G++V R+ ++ D G Q   L   + 
Sbjct: 120 IVIDYSSPNLAKEMHVGHLRSAIIGDAVSRVCEFLGHKVIRQNHVGDWGTQFGMLLAYME 179

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQA 240
               Q+     S+L   Y          +E AD+    ++     +E  L +   + +  
Sbjct: 180 ALDNQSAEYELSNLETFYKAAKQRFDESEEFADRARQLVVKLQSGDEYCLKLWNQF-IDV 238

Query: 241 MMKIIRDDLKALNIQ--HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +   +D    L ++   D  ++E  ++      +  +I++L  +G + E        + 
Sbjct: 239 SLSHCQDVYDRLGVKLTRDDVMAESAYN----DKLPGVIEHLREKGLLTE-------DQG 287

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
            Q   ++  +        G+ +   + K  G Y Y   DLA  + +  E G D+++Y + 
Sbjct: 288 AQCVFLEEYK-----GKEGEPLPIIVQKKGGGYLYATTDLAAIEYRQKELGGDHLMYFVD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE 416
           +  + +  ++  +A      +  I +       +  +DG P K   R G    L  ++DE
Sbjct: 343 ARQALHFDQIFTLARKAGFVEGDIQLNHYGFGTVMGKDGKPYK--SRDGGVTKLADLLDE 400

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  SV++  L +  +    FD+  +    + N
Sbjct: 401 AERRALELLQQKTTDLSEEQQKRVAEVVGISSVKYADLSKNRTSDYVFDWNHML-TFEGN 459

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YA+ R  SIF +  D   D + D+            D  EL L   L  +  V+
Sbjct: 460 TAPYLLYAFTRVNSIFDRLGDTAFDRNADII---------LSDERELALANQLVRFNEVL 510

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  +L+DLA  F   +           +   +  L   RL+L    A++
Sbjct: 511 HQVQDKAMPHFLCGFLFDLAGRFSSFYEAC------PILNQEDEALRNSRLKLSMLTANV 564

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++G+ +  +M
Sbjct: 565 LKQGLELLGIPTLEKM 580


>gi|281338995|gb|EFB14579.1| hypothetical protein PANDA_007149 [Ailuropoda melanoleuca]
          Length = 645

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 131/620 (21%), Positives = 258/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +S+L+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 60  NINSQLQEVFG-CAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQILKTKEQKVN 118

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 119 PREIAENITRHLPDNECVEKVEIAGPGFINVHLRKDFVSQQLTNLLVNGVKLP--ALGEY 176

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L   
Sbjct: 177 KKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 236

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 237 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEDFKKRAYQCVVLLQSKNPDIIK--AW 293

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    DI + E    F++     + DI++    +G+V          
Sbjct: 294 KLICDVSRQEFNRIYGALDISLIERGESFYQ---DRMNDIVEEFEDKGFVQVD------- 343

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 344 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYV 392

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + +   A        ++  +      +       K   R+G+ + L  +++
Sbjct: 393 VDSGQSVHFQTIFGAAQMAGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 452

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 453 EGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 511

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  +     +   D   E +L   +  +
Sbjct: 512 RGNTAAYLLYAFTRIRSIARLA-----NIDEGMLQKAAQETKIILDHEKEWKLGRCILRF 566

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 567 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGQVLKVNMWRMLLCEA 625

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++    +I+G++    M
Sbjct: 626 VAAVMAKAFDILGIKPVQRM 645


>gi|74211969|dbj|BAE40154.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S++V+G+E     +G  
Sbjct: 134 PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVELPV--LGDK 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   + + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFGADEEFKERAYQCVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++ ++      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQAIHFQIIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  R     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|127511312|ref|YP_001092509.1| arginyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166232841|sp|A3Q9V2|SYR_SHELP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126636607|gb|ABO22250.1| arginyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 581

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 125/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  ++ +  +  +      RI ++R +D  HG  +TN AM+L++    +P  +A+
Sbjct: 5   IQSLLEQAIQTLKQQAIIPADFEARIQVDRTKDKTHGDFATNLAMMLTKVARKNPREVAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +  +  V  V IAG GFIN ++  + L   L + +          +     V ++
Sbjct: 65  LIIDSLPQNSQVAKVEIAGPGFINFFIDENALTNQLMAALSDDHLG--VTLPTPQTVVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R  ++GD +   + F G++V R+ ++ D G Q   L   +     
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDAVVRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 187 QALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAM 241
           Q       +L   E +Y    ++    E     + +L   L   +E    + ++++  + 
Sbjct: 183 QQGEQAQVELADLESFYRAAKVRFDESEEFATRARQLVVELQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    +  + L +         E  ++      +  ++ +L  QG + E       S   
Sbjct: 242 LSHCHEVYERLGVSLTRADVRGESAYN----DDLEQVVRDLDAQGLLSE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    D  Q     T  G+ +   + K+DG + Y  +DLA  + +      D  +Y +  
Sbjct: 291 KVVFQDEFQ-----TKEGEPLPVIIQKADGGFLYATSDLAAMRYRSNVLKADRALYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++ ++A   +  + ++++       +   DG P K   R+G  + L  ++ E 
Sbjct: 346 RQALHFQQVFSLARTANFVRPELSLEHMGFGTMNGEDGRPFK--TRSGGVVKLVDLLSEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F ++    + N 
Sbjct: 404 ETRALELVRSKNPDMDEEELAKIAKVVGIASVKYADLSKNRASDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A +I      DL   ++          E +L   LA++  V+ 
Sbjct: 463 APYLLYAYTRVAGIFKRAAEI------DLTGASI----KLEHDKEKELGNKLAQFAEVLG 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ L  YL++LA  F   +           + A++      RL L    A  +
Sbjct: 513 RMVAKGQPHALCGYLFELAGAFSSFYEAC------PVLAADSEDEKKSRLLLAQLTAKTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+E+   M
Sbjct: 567 KQGLDLLGIETLERM 581


>gi|260914195|ref|ZP_05920668.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631828|gb|EEX50006.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 597

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 115/613 (18%), Positives = 230/613 (37%), Gaps = 70/613 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  S L + +++    +  +K +    ++ +      G    N  M  ++  G +P   A
Sbjct: 22  NIQSILSHRIQQAMIAVGADKNV--DALVRQSSKAQFGDYQANGIMAAAKKAGYNPREFA 79

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E ++ ++ ++   + + +AG GFIN++L   +L + + + +    E     + +   V  
Sbjct: 80  EKVIQQLDLNGIAEKIELAGPGFINIFLDKHWLAENVQNALND--EKLGITVTEKQTVVA 137

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ S N    MHVGH R  ++GD +   + F G +V R  ++ D G Q   L   +    
Sbjct: 138 DYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLEKME 197

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +     +    E +Y            A ++      F E+    +VK        + +
Sbjct: 198 NENASEMELSDLEAFYRA----------AKEHYDSDPEFAEKARNYVVKLQGGDEYCRTM 247

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              L  + +Q +      +++R + +     +   +    +   I+   K +       D
Sbjct: 248 WKKLVDITMQQNQ----QNYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKRHLAV--ED 301

Query: 306 RKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
              L+          G+ +   + K DG + Y   D+A  K +YE    D  +    +  
Sbjct: 302 EGALVVYLDEFKNKDGEAMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRALVFSDTRQ 361

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
           S ++++   +            +      + L +DG P K   R G  + L  ++DE   
Sbjct: 362 SQHMQQAWLITRKAGYVPDNFQLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLDEAVE 419

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   V   SV++  L +  +    FD+  +    + N   
Sbjct: 420 RATQLINEKSTALSEQEKAAVIEAVAIGSVKYADLSKNRTTDYIFDWDNMLSF-EGNTAP 478

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAY R RSIF ++     D+      +  +      D  E  L V L ++   ++  
Sbjct: 479 YMQYAYTRIRSIFNRS-----DISESQLQQATL---KFADEKERVLAVKLLQFEEAVQVV 530

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLY+LA VF   + H         +   +  + M RL+L       +  
Sbjct: 531 AKEGSPHILCTYLYELAGVFSSFYEHC------PILNNEDENVKMSRLKLALLTEKTLKQ 584

Query: 573 GLNIIGVESPNEM 585
           GL ++G+++  +M
Sbjct: 585 GLTLLGIKTVEKM 597


>gi|332238981|ref|XP_003268683.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Nomascus
           leucogenys]
          Length = 660

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 130/624 (20%), Positives = 259/624 (41%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G+      
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVRLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL + +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDL-QLFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +   +    DI + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQEFNKIYDTLDISLIERGESFYQ---DRMYDIVKEFEDRGFVQLD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTPVFLAGFGVVLGEDKKKFKTRSGETVRLV 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             +    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYVFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH 501
            +  K N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   
Sbjct: 524 LD-DKGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRML 636

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  AVA+++  G +I+G++    M
Sbjct: 637 LCEAVAAVMAKGFDILGIKPVQRM 660


>gi|308184122|ref|YP_003928255.1| arginyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060042|gb|ADO01938.1| arginyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 541

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 161/554 (29%), Positives = 276/554 (49%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G         K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQVKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            ++     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ASNDLKPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +       +  E  L+      P+ +E++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLKNLNAEEKYLLFSALSLPKAVESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  + +
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLTN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|238897849|ref|YP_002923528.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511649|sp|C4K487|SYR_HAMD5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229465606|gb|ACQ67380.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 576

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 129/617 (20%), Positives = 240/617 (38%), Gaps = 73/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S R+++ L      I           +        G    N  M  ++   + 
Sbjct: 1   MNIQLFLSDRIRHAL------IMAGAPDDSDAQLHPSTKAQFGDYQANGVMSAAKKQRIP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +      V IAG GFIN++L+  ++ + + S+ + G + G   +   
Sbjct: 55  PRELAERVLEHLDLSDIAKKVEIAGPGFINIFLNEQWISQKIESVFI-GPKLGLTPVT-P 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ I++ + N    MHVGH R  ++GD +A  ++F G+ V R  +I D G Q   L   
Sbjct: 113 QRIVIDYSAPNVAKEMHVGHLRSTIIGDAMARTLSFLGHHVIRANHIGDWGTQFGMLIAY 172

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +   ++  AL    SDL E +Y            A K+  E   F +     +VK  S  
Sbjct: 173 LEKIQHDHALEMVLSDL-EHFYRE----------AKKHYDEDEIFAQRARDYVVKLQSGD 221

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              + +   L  + +  +       + R   +   + +   +    +   I+    +K  
Sbjct: 222 PYCREMWRKLVDITMTQNHL----SYERLKVTLTPEDMMGESLYNDMLPNIVEDLIAKGV 277

Query: 300 QKCDMDRKQLLFR--STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
              D     +        +G+ +   + K DG Y Y   D+A  K + E    D ++Y +
Sbjct: 278 AVKDQGSVLVFLEEYQNKIGEPMGVVIQKKDGGYLYATTDIACVKYRCETLKADRILYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S  + ++ ++  +          +++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DSRQNQHLAQVWTITRLAGYVPESVSLEHHMFGMMLGKDGKPFK--TRTGGTVKLSDLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+ ++    + 
Sbjct: 396 EAVERAGQLIRGKNPDLNETDLNNLIQAVAIGAVKYADLSKNRTTDYIFDWDRMLSF-EG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY+R  S+F+++      LD       VI QE      E  L + L ++  +
Sbjct: 455 NTAPYIQYAYSRVTSLFKKSG-----LDEKKIMSPVIIQE----EKERSLAILLLQFEEM 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I        P+ +  YLYDLA+ F   + H         + A N ++   RL+L    A 
Sbjct: 506 ISTVARDGTPHLMCSYLYDLATRFSIFYEHC------PILNAKNEQIRQSRLKLAWLTAK 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL  +G+E+   M
Sbjct: 560 TLKLGLKNLGIETVERM 576


>gi|149726104|ref|XP_001503321.1| PREDICTED: arginyl-tRNA synthetase [Equus caballus]
          Length = 658

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 261/620 (42%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 73  NINSRLQEVFG-CAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKSKEQKVN 131

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 132 PREIAENITKHLPGNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--ALGEN 189

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L   
Sbjct: 190 KKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIAH 249

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 250 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDITK--AW 306

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    DI + E    F++     + DI+     +G+V          
Sbjct: 307 KLICDVSRQEFNKIYDALDISLIERGESFYQ---DRMNDIVKEFEDRGFVQVD------- 356

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 357 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 405

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  S +++ + A A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 406 VDNGQSVHLQTIFAAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 465

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 466 EGLKRSMDKLREKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 524

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 525 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKIILDHEKEWKLGRCILRF 579

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 580 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 638

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 639 VAAVMAKGFDILGIKPVQRM 658


>gi|320322071|gb|EFW78167.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 578

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 234/610 (38%), Gaps = 67/610 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPYDEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D + Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVQYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R   +FR+         FD     ++         E +L   LA++   + N    
Sbjct: 464 YAYTRVAGVFRKLG-----TPFDASKGQIVLAA----PQEQELAARLAQFTETLNNVAEK 514

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ L  YLYDLA +F   + +         + A N      RL+L       +  GL+
Sbjct: 515 GTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGRTLKQGLD 568

Query: 576 IIGVESPNEM 585
           ++G+E+   M
Sbjct: 569 LLGLETLERM 578


>gi|261365442|ref|ZP_05978325.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566109|gb|EFC87669.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 572

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 235/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHTALND-TRFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKDGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +V       +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DVTAPTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +       RLQL       +  GL+++G++  + M
Sbjct: 533 C-------PILKSEGATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|12847471|dbj|BAB27583.1| unnamed protein product [Mus musculus]
          Length = 660

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 132/620 (21%), Positives = 259/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S +V+G++     +G  
Sbjct: 134 PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSHLVNGVQLPV--LGDK 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHV H R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVVHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++ ++      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSLDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D  +  R     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 641 VAAVMAKGFDILGIKPVQRM 660


>gi|219871399|ref|YP_002475774.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691603|gb|ACL32826.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 548

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 121/579 (20%), Positives = 231/579 (39%), Gaps = 68/579 (11%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
               G    N  M  ++ LGL+P   A+ +V  + ++   + + IAG GFIN++L+P++L
Sbjct: 6   KVQFGDYQANGIMGAAKKLGLNPREFAQKVVDNVDLNGIAEKLEIAGPGFINIFLAPTWL 65

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  +    SG + G N + +   V +++ S N    MHVGH R  ++GD +   + F G
Sbjct: 66  AQQ-TENAFSGDKLGIN-LNQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDGVVRALEFLG 123

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V R  ++ D G Q   L   +     +     +    E +Y            A ++ 
Sbjct: 124 NKVIRANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYR----------TAKEHY 173

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E+    +VK  S     + +   L  + +Q +      +++R + +   + + 
Sbjct: 174 DSDEVFAEKARNYVVKLQSGDDYCRTMWKKLVNITMQQNQH----NYNRLNVTLTENDVM 229

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFA 335
             +    +   I+   K++     D D   ++F        GD +   + K DG + Y  
Sbjct: 230 GESLYNPMLPEIVADLKAQGLAVED-DGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTT 288

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYR 393
            D+A  K ++E    D  +    +  S ++++   +           ++      + L +
Sbjct: 289 TDIAAAKYRFETLKADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHHNFGMMLGK 348

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG P K   R G  + L  ++DE                           V   +V++  
Sbjct: 349 DGKPFK--TRTGGTVKLADLLDEAVERAEKLIAEKNPDLTACEKQAVVEAVAIGAVKYSD 406

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +  +    FD+  +    + N   Y+QYAY R RSIF +A      +D +    N++ 
Sbjct: 407 LSKNRTTDYVFDWDNMLSF-EGNTAPYMQYAYTRVRSIFSRAG-----IDPNSLTANIV- 459

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                D  E  L + L ++   +        P+ L  YLY+LA +F   +          
Sbjct: 460 ---LIDEKERNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFYEAC------P 510

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A    +   RL+L H  A  +  GL+++G+++  +M
Sbjct: 511 ILNAE-ESIKQSRLKLAHLTAKTLKQGLDLLGIKTVEKM 548


>gi|15644947|ref|NP_207117.1| arginyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501046|sp|P56128|SYR_HELPY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2313419|gb|AAD07388.1| arginyl-tRNA synthetase (argS) [Helicobacter pylori 26695]
          Length = 541

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 164/554 (29%), Positives = 279/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     LL   EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLLKENEETIIEVLSGYARDLMLLEIKDNLDALGIHFDSYASEKEVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFEQLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P+ IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLTNLNAEEKYLLFSALSLPKAIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLIVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|149412502|ref|XP_001509403.1| PREDICTED: similar to arginyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 691

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 140/621 (22%), Positives = 259/621 (41%), Gaps = 75/621 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS------RPLGL 59
           + +SRL+        K          + +   +    G    N+AM ++      +   +
Sbjct: 105 NINSRLQEIFG-YAIKAAYPDLENPPLAVTPSQQSKFGDYQCNSAMSITQMLQKTKEQKV 163

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE I   +  +  +D V IAG GFIN++LS S++ K L++++V+G++     +G+
Sbjct: 164 SPREIAEKITKNLPDNDYIDKVEIAGPGFINVHLSKSFVSKQLTNLLVNGVQPP--ALGE 221

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV ++F S N    MHVGH R  ++GD++  L  F GY+V R  ++ D G Q   L  
Sbjct: 222 IKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFVGYDVLRLNHLGDWGTQFGMLIA 281

Query: 180 SVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  +
Sbjct: 282 HLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKTPEITK--A 338

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + +  + R +   +    DI I E    F++     + D++     +G+V         
Sbjct: 339 WKMICDVSRQEFNKIYDALDISIIERGESFYQ---DRMNDVVKEFEDRGFVEVD------ 389

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                    D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IY
Sbjct: 390 ---------DGRKIVF---VPGCPVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANIIIY 437

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ S  S +++ + A A  +     Q   ++     +       K   R+GD + L  ++
Sbjct: 438 VVDSGQSVHLQTVFAAAKMIGWYDPQETRVVHAGFGVVLGEDKKKFKTRSGDTVRLIDLL 497

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +E                             V    +++  L         F F K+ + 
Sbjct: 498 EEGLKRSMDKLKEKERDKVLTPEELRTAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLD- 556

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
            + N   Y+ YA+ R RSI R A     ++D ++  +     E   D   E +L   +  
Sbjct: 557 DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLRKAAQETEILLDHEKEWKLGRCILR 611

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  
Sbjct: 612 FPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKIVKVNMWRMLLCE 670

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A A+I+  G +I+G++    M
Sbjct: 671 ATAAIMAKGFDILGIKPVQRM 691


>gi|317012159|gb|ADU82767.1| arginyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 541

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 278/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHKKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLGRFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            ++     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ASNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLTGDVVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +       +  E  L+      P+ IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLKNLNAEEKYLLFSALSLPKAIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|261837760|gb|ACX97526.1| arginyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 541

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 277/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     P  IAE +  +I        +F    A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPSVIAEELALKISTHEKTQGLFDSVAACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNILKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEI--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           N       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------NTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|297379539|gb|ADI34426.1| arginyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 541

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 161/554 (29%), Positives = 277/554 (50%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G +    +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K 
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKR 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+ + +     + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFRQNYTKYTNIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P++IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLTNLNAEEKYLLFSALSLPKIIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  +++
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLSN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|294139047|ref|YP_003555025.1| arginyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293325516|dbj|BAJ00247.1| arginyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 581

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 124/615 (20%), Positives = 247/615 (40%), Gaps = 74/615 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   L  +  +  +      RI ++R +D  HG  +TN AM+L++    +P  IA+
Sbjct: 5   IQSLLIQALDVLKQQEVIPTDFEARIQVDRTKDKTHGDFATNLAMMLTKTARKNPREIAQ 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           LI+  +  D  V  V IAG GFIN ++  + L   L + +          + +   + ++
Sbjct: 65  LIIDSLPQDSQVAKVEIAGPGFINFFIDENALANQLMAALKDDHLG--ISLPEQQTIVVD 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFW 183
           + S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +  
Sbjct: 123 YSSPNLAKEMHVGHLRSTIIGDSVVRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRA 182

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAM 241
           +  +      SDL   Y          +E A +    +++    +E    + ++++  + 
Sbjct: 183 KNGEQAQMELSDLETFYRAAKVRFDESEEFAVRARKLVVSLQSGDEYCNKLWREFNDIS- 241

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +    D    L +    +    E  ++    + + +++  L  QG + E       S   
Sbjct: 242 LNHCHDVYARLGVSLTREDVRGESAYN----ADLVEVVKELDTQGLLSE-------SNGA 290

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
           +    D  +        GD +   + K+DG Y Y  +D+A    + +    D ++Y +  
Sbjct: 291 KVVFQDEFK-----NKEGDPLPVIIQKADGGYLYATSDMAAMSYRSKVLNADRVLYFVDL 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE- 416
             + + +++  +A   +  + ++++       +   DG P K   R+G  + L  ++ E 
Sbjct: 346 RQALHFQQVFKLARKANFVRPELSLEHMGFGTMNGADGRPFK--TRSGGVVKLVDLLAEA 403

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +  +    F F ++    + N 
Sbjct: 404 DIRALELVRSKNPDMDEAELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQMLSF-EGNT 462

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R   IF++A+      D DL    ++ +       E  L   LA++  V+ 
Sbjct: 463 APYLLYAYTRVIGIFKRAE------DIDLSQAKILLE----HDKEKNLGNKLAQFGEVLS 512

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 +P+ +  YL++LA  F   +           + A   +    RL +    A  +
Sbjct: 513 RMVSKGQPHAMCAYLFELAGAFSSFYEAC------PVLAAETEEQKKSRLLIAKLTAKTL 566

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+E+ + M
Sbjct: 567 KQGLDLLGIETLDRM 581


>gi|161723314|ref|NP_245488.2| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
          Length = 577

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 117/616 (18%), Positives = 231/616 (37%), Gaps = 70/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S L + +++       + +     ++ +      G    N  M  ++ LG +
Sbjct: 1   MNI----QSILSHKIQQAMIASGADTQ--SDALVRQSAKVQFGDYQANGIMAAAKKLGRN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++ ++ +    + + IAG GFINL+L  ++L + +S  V       +    + 
Sbjct: 55  PREFAQQVIEQLDLSEIAEKIEIAGPGFINLFLDKNWLAEQISLAVNDDKLGIQ--ATET 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V  ++ S N    MHVGH R  ++GD +   + F G +V R  ++ D G Q   L   
Sbjct: 113 QTVVADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     ++    +    E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKVENESASEMELSDLEAFYRA----------AKEHYDSDPVFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      ++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKKLVDITMQQNQH----NYDRLNVTLTEKDVMGESLYNPMLSDIVADLKQQGLA 278

Query: 301 KCDMDRKQLLFRS--TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
             D     +         G+ +   + K DG + Y   D+A  K +YE    D  +    
Sbjct: 279 VEDEGAFVVYLDEFKNKEGEPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSD 338

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +  S ++++   +            +      + L +DG P K   R G  + L  ++DE
Sbjct: 339 TRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLDE 396

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   SV++  L +  +    FD+  +    + N
Sbjct: 397 AVERATQLIQEKSTALSAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNMLSF-EGN 455

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R RSIF +++    DL       +        +  E  L + L ++   I
Sbjct: 456 TAPYMQYAYTRIRSIFNRSELNEQDLSESPVVLS--------NEKERLLAIKLLQFEEAI 507

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +       P+ L  YLY+LA VF   + H         +   + ++   RL+L       
Sbjct: 508 QIVAKEGTPHVLCTYLYELAGVFSSFYEHC------PILNNEDEQIKRSRLKLALLTEKT 561

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+++ ++M
Sbjct: 562 LKQGLDLLGIKTVDKM 577


>gi|31077163|sp|Q9KQC6|SYR_VIBCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 577

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 233/617 (37%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + R+   ++                ++ +      G    N  M  ++ LG +
Sbjct: 1   MNIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ++       IAG GFIN++LS  +L     + +            K 
Sbjct: 55  PREFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK- 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  +
Sbjct: 114 -TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R Q+A      +L +               + K   E   F E     +VK      
Sbjct: 173 L-ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDP 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K   
Sbjct: 224 FCLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 VED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +          +++      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA +F   +           + A    +   RL+L    A 
Sbjct: 507 VQSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL ++G+++   M
Sbjct: 561 TIKQGLALLGIDTLERM 577


>gi|157963591|ref|YP_001503625.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083549|sp|A8H953|SYR_SHEPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157848591|gb|ABV89090.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 581

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 130/614 (21%), Positives = 244/614 (39%), Gaps = 74/614 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            S L   L  +  +  V      RI ++R +D +HG  +TN AM+L++  G +P  +A+L
Sbjct: 6   QSLLAESLNALKQQGIVPADFEARIQVDRTKDKSHGDFATNLAMMLTKAAGKNPRELAQL 65

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           ++  +     V+ V IAG GFIN ++  + L   L + + S        +     V +++
Sbjct: 66  LIDNLPESSHVEKVEIAGPGFINFFIDDNALANQLMAALNSDTLG--IELPASQTVVVDY 123

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFWR 184
            S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +   
Sbjct: 124 SSPNLAKEMHVGHLRSTIIGDSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMM 242
             +      SDL   Y          +E A +    ++     +E    + ++++  + +
Sbjct: 184 NGEQAKMELSDLETFYRAAKVRFDESEEFATRARKLVVALQSGDEYCNKLWREFNDIS-L 242

Query: 243 KIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +  + L +         E  ++    S +  ++ +L  QG + E       S   +
Sbjct: 243 SHCHELYERLGVSLTRADVRGESAYN----SDLAQVVADLDSQGLLSE-------SNGAK 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
               D  +        G+ +   + K+DG Y Y  +DLA  + +      D  +Y +   
Sbjct: 292 VVFQDEFK-----NKEGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLNADRALYFVDLR 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + + +++  +A      + +++        +   DG P K   R+G  + L  ++ E  
Sbjct: 347 QALHFQQVFKLAKTAKFVREEMSFEHMGFGTMNGEDGRPFK--TRSGGVVKLIDLLKEAD 404

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  SV++  L +  +    F F ++    + N  
Sbjct: 405 IRALDLVRSKNPDMDEAELAEIARVVGIASVKYADLSKNRASDYIFSFEQMLSF-EGNTA 463

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YAY R   IF++A+      D DL    +I +       E  L   LA++  V+  
Sbjct: 464 PYLLYAYTRVAGIFKRAQ------DVDLSDAKIILE----HEKEKDLGTKLAQFGEVMAR 513

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                +P+ L  YL++LA  F   +           + A   +L   RL L    A  + 
Sbjct: 514 MVSKGQPHALCGYLFELAGAFSSFYEAC------PVLAAETEELKKSRLLLSQLTAKTLK 567

Query: 572 SGLNIIGVESPNEM 585
            GLN++G+E+   M
Sbjct: 568 QGLNLLGLETLERM 581


>gi|298368627|ref|ZP_06979945.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282630|gb|EFI24117.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 572

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 235/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESTEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHAALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRSEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVTEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DAAAPTVLTEPLEKQLATELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEG-ATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|152978766|ref|YP_001344395.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704277|sp|A6VNB3|SYR_ACTSZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150840489|gb|ABR74460.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 575

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 124/618 (20%), Positives = 238/618 (38%), Gaps = 76/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++++ +     +   E        + +      G    N  M  ++ LGL+
Sbjct: 1   MNIQQLLSEKIRHAMIAAGAQQPAEPA------VRQSGKPQFGDYQANGIMGAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D   + + IAG GFIN++LS ++L    +  ++S + +G     K 
Sbjct: 55  PREFAQKVLDNLNLDGIAEKLEIAGPGFINIFLSKNWLV-CHADEMLSAVNFGIKTA-KP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +          E +Y            A ++      F E+    +VK  S   
Sbjct: 173 LEKMENENASAMQLSDLEAFYRA----------AKEHYDNDEAFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             +I+   L  + ++H+     +++ R + +     +   +    +   I+   K +   
Sbjct: 223 YCRIMWKKLVDITMRHNQ----ENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKKQGLA 278

Query: 301 KCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
               D   L+          GD +   + K DG Y Y   D+A  K + ++   D ++  
Sbjct: 279 V--EDDGALVVYLDEFKNKDGDPMGVIVQKKDGGYLYTTTDIAAAKYRCHKLHADRVLVF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             S  S ++++   +           ++      + L +DG P K   R G  + L+ ++
Sbjct: 337 SDSRQSQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFK--TRTGGTVKLKDLL 394

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V   SV++  L +  +    FD+  +    +
Sbjct: 395 DEAVERADKLIAERNPDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFE 453

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R RSIF +A      L+ D+            D  E  L++ L ++  
Sbjct: 454 GNTAPYMQYAYTRIRSIFARAGIEPNSLNDDIV---------LTDDKERVLVIKLLQFEE 504

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +        P+ L  YLY+LA +F   +           + A  R +   RL+L    A
Sbjct: 505 ALNGVAKDGMPHILCQYLYELAGMFSAFYEAC------PILNAE-RPIKNSRLKLAALAA 557

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G+++  +M
Sbjct: 558 KTLKQGLDLLGIKTVEKM 575


>gi|255066448|ref|ZP_05318303.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049328|gb|EET44792.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 572

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 119/587 (20%), Positives = 239/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHAALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDSL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGAGEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +      +D
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGE------WD 477

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +    V+      +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 478 MAAPTVLT-----EPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEG-ATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|217031544|ref|ZP_03437049.1| hypothetical protein HPB128_21g102 [Helicobacter pylori B128]
 gi|298736737|ref|YP_003729267.1| arginyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946744|gb|EEC25340.1| hypothetical protein HPB128_21g102 [Helicobacter pylori B128]
 gi|298355931|emb|CBI66803.1| arginyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 541

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 274/554 (49%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I         F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +     +G +       K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKERFGSQPKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  RS++  D+ DR L+K D S T
Sbjct: 259 -YAVFERLEKANALYE----------------KDSKIWLRSSLYQDESDRVLIKEDKSCT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P+ IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLTNLNAEEKYLLFSALSLPKAIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  + +
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLTN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|196232560|ref|ZP_03131412.1| arginyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196223322|gb|EDY17840.1| arginyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 584

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 135/614 (21%), Positives = 242/614 (39%), Gaps = 67/614 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S+ L++ L+         +       ++   D   G   TN AM+L++    +P  +A+
Sbjct: 3   ISALLESKLRSATASFGPVEA-----RVQAANDARFGDYQTNIAMVLAKQQKANPRQVAQ 57

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+ ++ +      + IAG GFIN  L P +L K  +  +      G         + I+
Sbjct: 58  QIIDQLDVADMCAPLEIAGAGFINFRLKPEWLAKHFTGFLSD-ARLGVPQPEHARTLVID 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           F S N   PMHVGH R   +GD L+ +  F G++V R+ +I D G Q   + L       
Sbjct: 117 FSSPNVAKPMHVGHIRSTFLGDALSRIAEFVGHKVIRDNHIGDWGTQFGMILLGWKTELN 176

Query: 186 QQALYNNDSDLPEGYYPGVYLK---HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           ++AL  +     E  Y  +  +         A +     L   +E+ L +  +  ++   
Sbjct: 177 KEALAADALLEMERIYKLISARCKADPATLQAAQQELVKLQSGDEENLQLWHE-MIRLSQ 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                    L ++ D+ + E  ++      ++D++  L  +G   E         + Q  
Sbjct: 236 AQFDAVYARLGVRFDVTLGESFYNP----QLKDVVVQLRDRGIARESE-GAWCVFSDQVG 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             +    L +      D    + KSDG+  Y   DLA  + + +      ++YV      
Sbjct: 291 KPENDPFLIKDKDGWRDNPAMVQKSDGASNYTTTDLATLEYRLKTWSPTEIVYVTDGRQQ 350

Query: 362 GYVKRLEAVAAAVSEK---KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + ++L A+      +     ++  +    V L  DG P K   R+GD + L  ++DE  
Sbjct: 351 LHFRQLFAIFGRWHSELAATVRLAHVWFGAV-LGDDGKPFK--TRSGDTVKLVDLLDEAE 407

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  +V++  L         F + K+    + N  
Sbjct: 408 ERAYALVTEKNPEASEADRREIARVVGLGAVKYADLLPNRQSDYVFSWEKMLSF-QGNTA 466

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+Q AY R R+IFR+A + F   +  +            + +EL L   L ++  V+  
Sbjct: 467 PYLQNAYVRIRAIFRKAGEAFEVGNTAV---------ELVEPAELSLAKKLLQFGEVLPF 517

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P  LA YL++LA+++HG +      P L+    +       RL L  A A ++ 
Sbjct: 518 VLEDYRPNLLANYLFELATIYHGFYEFC---PVLK----SEGATRTSRLALCDATARVLK 570

Query: 572 SGLNIIGVESPNEM 585
            GL ++G+E+P  M
Sbjct: 571 QGLGLLGIEAPERM 584


>gi|319955938|ref|YP_004167201.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418342|gb|ADV45452.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 565

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 139/610 (22%), Positives = 244/610 (40%), Gaps = 78/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
              ++L   + +   K ++    ++ + +        G    N AM L++ LG +P  IA
Sbjct: 2   QIKAQLNQLIHDACAKAEIP---VETVQVNEAGKPEFGDYQFNGAMPLAKKLGKNPRQIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + IV  +  +P +    IAG GFINL LSP +L   L          G     +  +V +
Sbjct: 59  QEIVEALPENPILSKAEIAGPGFINLTLSPKWLAARLEEAARD-ERLGVGRQSEPKRVVV 117

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ S N    MHVGH R  ++GD+LA+L AF G EV R+ +I D G Q   L  +     
Sbjct: 118 DYSSPNMAKQMHVGHLRSTIIGDSLANLFAFLGDEVIRQNHIGDWGTQFGMLI-AYLEEL 176

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMK 243
            +    +  DL E Y             ADK    ++     + K L + +++ +   + 
Sbjct: 177 GEGAEGSLHDLEEFYKAAKKRFDEDAAFADKSREYVVKLQGGDVKCLHLWENF-IDKSLG 235

Query: 244 IIRDDLKALNIQ--HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +    L+++   +   +E  ++      ++ I+++L  +G + E             
Sbjct: 236 HCEEVYSKLHVRLTREDVKAESSYN----DDLQKIVEDLQAKGLLKES------------ 279

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
                 +++F      ++    + KSDG + Y   DLA  + +  E G   + YV+ +  
Sbjct: 280 ---RGAKVVFTDD---EENPLIIQKSDGGFLYATTDLAAIRFRVKELGAKRISYVVDARQ 333

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           +G+ K++ AVA         + +       +  D        R G  + L  ++DE    
Sbjct: 334 AGHFKQVFAVARMAGYAPEDVRLEHVSFGMML-DKSGRPFKTRDGGTVKLIDLLDEAVER 392

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V++  L         FD+ ++    + N   Y 
Sbjct: 393 AKGAITQREAYDEEELEKIAEIVGIGAVKYSDLSINRESNYIFDWDRMLSL-EGNTSLYQ 451

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR RSIFR+            +   +  +    D  E +L + L +   V+  A  
Sbjct: 452 QYAYARIRSIFRK------------YDGTIEGKVQLGDELERRLALKLLQLEDVLRAAAR 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ +  YLYDLA++F   + +   NP LR       +L   RLQL  + A  +   L
Sbjct: 500 EAMPHYITGYLYDLATLFMKFYEN---NPILR--SDVPEELRQSRLQLAKSTADTLKLAL 554

Query: 575 NIIGVESPNE 584
            I+G++    
Sbjct: 555 EILGIKVLER 564


>gi|73953488|ref|XP_853102.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 1 [Canis
           familiaris]
          Length = 660

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 131/620 (21%), Positives = 259/620 (41%), Gaps = 74/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFG-CAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECVERVEIAGPGFINVHLRKDFVSQQLTNLLVNGVQLP--ALGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    DI + E    F++     + D++     +G+V          
Sbjct: 309 KLICDVSRQEFNKIYDALDISLIERGESFYQ---DRMNDVVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  S + + +   A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     +++ ++  +     +   D   E +L   +  +
Sbjct: 527 RGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQETKIVLDHEKEWKLGRCILRF 581

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 582 PEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGQVLKVNMWRMLLCEA 640

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+I+    +I+G++    M
Sbjct: 641 VAAIMAKAFDILGIKPVQRM 660


>gi|15677359|ref|NP_274514.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|23822209|sp|Q9JYM8|SYR_NEIMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|7226749|gb|AAF41862.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316986039|gb|EFV64976.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140638|gb|EGC63156.1| arginyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199890|gb|ADY95345.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 572

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 119/587 (20%), Positives = 238/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  IVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +         +    +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|126207527|ref|YP_001052752.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165975497|ref|YP_001651090.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|126096319|gb|ABN73147.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165875598|gb|ABY68646.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 548

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 119/579 (20%), Positives = 222/579 (38%), Gaps = 68/579 (11%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
               G    N AM  ++ LG++P   A+ I+    ++   D + IAG GFIN++L+ ++L
Sbjct: 6   KPEFGDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWL 65

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
               S  + +     +        + I++ S N    MHVGH R  ++GD +   + F G
Sbjct: 66  ANQASEALQAVNFGIKTA--NPQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLG 123

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V R  ++ D G Q   L   +     +     +    E +Y            A ++ 
Sbjct: 124 NKVIRANHVGDWGTQFGMLIAYLEKMENEHASQMELSDLEAFYRA----------AKEHY 173

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E+    +VK  S     + +   L  + + H+     +++ R + +     + 
Sbjct: 174 DSDEVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQ----ENYDRLNVTLSEKDVM 229

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFA 335
             +    +   I+   K+K     D D   ++F        GD +   + K DG + Y  
Sbjct: 230 GESLYNPMLPEIVADLKAKGLAVED-DGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTT 288

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYR 393
            D+A  K +YE    D ++    S  + ++++   +           ++      + L +
Sbjct: 289 TDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMMLGK 348

Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426
           DG P K   R+G  + L+ ++DE                           V   SV++  
Sbjct: 349 DGKPFK--TRSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVKYSD 406

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +  +    FD+  +    + N   Y+QYAY R RSIF +A      L+ ++       
Sbjct: 407 LSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRAGIDVNGLNGEI------- 458

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             +  +  E  L V L ++   +        P  L  YLY+LA  F   +          
Sbjct: 459 --NLTEDKERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFYEAC------P 510

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A    +   RL L    A  +  GL+++G+++  +M
Sbjct: 511 MLNAE-ENVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 548


>gi|329119396|ref|ZP_08248082.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464541|gb|EGF10840.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 572

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 127/618 (20%), Positives = 242/618 (39%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L            +E              +V++  ++   G    N  M  ++    +
Sbjct: 1   MNLHQTVE-------REAAAAFAAAGIAGANVVLQPAKNADFGDYQINGVMGAAKQAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +      G       
Sbjct: 54  PRELAQKVADALAGNAVIESAQVAGPGFINLRLRPDFLAEHVQTALNDPRC-GVAKKDTP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ ++ F+G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFAGDTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       SDL + Y             AD     ++     +E  L + + +  
Sbjct: 173 MVEQQKDNAAFELSDLEQFYRAAKVRFDEDAAFADTAREYVVKLQGGDENVLKLWQQFVE 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L +       E  ++      +++ +D+L RQG   E        
Sbjct: 233 ISLGHAQAVYDTL-GLKLTPADVAGESKYNP----ELQNTVDDLVRQGLAVE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +      D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L A +         +          + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFATSRKAGYLPDSVKAEFVGFGTMMGKDGRPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  +V++  L +  +    FD+  +    +
Sbjct: 394 DEAVERAAALVKEKNPDLGADDAAKIAQTVGIGAVKYADLSKNRTSDYIFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A++     D  L            + +E QL + L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAEEWDAAADLVL-----------TEPAEKQLALELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++A     P+ LA YLY LA++F   +           ++A        RLQL     
Sbjct: 502 VLQSAADTGYPHYLAAYLYQLATLFSRFYEAC------PILKAEGTA-RNSRLQLARLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
           +I+  GL ++G+E    M
Sbjct: 555 NILKQGLELLGIEVLEVM 572


>gi|167625769|ref|YP_001676063.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083548|sp|B0TVV1|SYR_SHEHH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167355791|gb|ABZ78404.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 581

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 130/614 (21%), Positives = 243/614 (39%), Gaps = 74/614 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            S L   L  +  +  V      RI ++R +D +HG  +TN AM+L++  G +P  IA+L
Sbjct: 6   QSLLAESLNALKQQGIVPADFEARIQVDRTKDKSHGDFATNLAMMLTKAAGKNPREIAQL 65

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           ++  +     V+ V IAG GFIN ++  + L   L  +V    ++    +     V +++
Sbjct: 66  LIDNLPESAHVEKVEIAGPGFINFFIDDNALANQL--MVALNSDHLGLELPTPQTVVVDY 123

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL---ALSVFWR 184
            S N    MHVGH R  ++GD++   + F G++V R+ ++ D G Q   L      +   
Sbjct: 124 SSPNLAKEMHVGHLRSTIIGDSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAA 183

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMM 242
             +      SDL   Y           E A +    ++     +E    + ++++  + +
Sbjct: 184 NGEQAKMELSDLENFYRAAKVRFDESAEFATRARKLVVELQSGDEYCNKLWREFNDIS-L 242

Query: 243 KIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +  + L +         E  ++    S +  ++ +L  QG + E       S   +
Sbjct: 243 SHCHELYERLGVSLTRADVRGESAYN----SDLAQVVADLDAQGLLSE-------SNGAK 291

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
               D  +        G+ +   + K+DG Y Y  +DLA  + +      D  +Y +   
Sbjct: 292 VVFQDEFK-----NKEGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLNADRALYFVDLR 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE-- 416
            + + +++  +A      + +++        +   DG P K   R+G  + L  ++ E  
Sbjct: 347 QALHFQQVFKLAKTAKFVREEMSFEHMGFGTMNGEDGRPFK--TRSGGVVKLIDLLKEAD 404

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  SV++  L +  +    F F ++    + N  
Sbjct: 405 TRALDLVRSKNPDMDEAELAEIARVVGIASVKYADLSKNRASDYIFSFEQMLSF-EGNTA 463

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ YAY R   IF++A+      D DL    +I +       E  L   LA++  V+  
Sbjct: 464 PYLLYAYTRVAGIFKRAQ------DVDLSDATIILE----HEKEKDLGTKLAQFGEVMTR 513

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                +P+ L  YL++LA  F   +           + A   +    RL L    A  + 
Sbjct: 514 MVGKGQPHALCGYLFELAGAFSSFYEAC------PVLAAETEESKKSRLLLSQLTAKTLK 567

Query: 572 SGLNIIGVESPNEM 585
            GLN++G+E+   M
Sbjct: 568 QGLNLLGLETLERM 581


>gi|319410738|emb|CBY91120.1| arginyl-tRNA synthetase (arginine-tRNA ligase; ArgRS) [Neisseria
           meningitidis WUE 2594]
          Length = 572

 Score =  415 bits (1067), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/587 (20%), Positives = 237/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEATKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGSIKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|296314056|ref|ZP_06863997.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839307|gb|EFH23245.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 572

 Score =  415 bits (1067), Expect = e-113,   Method: Composition-based stats.
 Identities = 120/587 (20%), Positives = 241/587 (41%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEVLAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLARNIQTALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L +L ++ +    E  ++ 
Sbjct: 204 TFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-SLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +         +    +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDVKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAGKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               P L+   A+       RLQL       +  GL+++G++  + M
Sbjct: 533 C---PILKAEGAS----RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|121635178|ref|YP_975423.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166232814|sp|A1KUU4|SYR_NEIMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120866884|emb|CAM10643.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|254673245|emb|CBA08256.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 572

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/587 (20%), Positives = 236/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQAVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   D    
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDADAPTV 483

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L            +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 484 L-----------TEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|313668110|ref|YP_004048394.1| arginyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005572|emb|CBN87008.1| arginyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 572

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/587 (19%), Positives = 236/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G +   K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLARNIQTALND-ARFGVSKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + + L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQAVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A          
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAG--------- 474

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 475 --KWDATAPTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +       RLQL       +  GL+++G++  + M
Sbjct: 533 C-------PILKSEGATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|326561584|gb|EGE11925.1| arginyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 567

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 123/609 (20%), Positives = 229/609 (37%), Gaps = 76/609 (12%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +LK  +       +VE       ++ +      G    N  M  ++ LG++P   A+ ++
Sbjct: 2   KLKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVL 55

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             + ID   + + IAG GFIN++L   ++ K  +   +S          +   V +++ S
Sbjct: 56  DHLSIDDIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNAAQNDTVVVDYSS 113

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   +       +
Sbjct: 114 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAYLEKVQNDDV 173

Query: 190 YNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRD 247
            + D SDL   Y    +     +  A K  + ++     +++   +    V   M   + 
Sbjct: 174 KDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLVDITMAQCQH 233

Query: 248 DLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               LN+    D  + E  ++   PS    I+  L  +G   E               +D
Sbjct: 234 TYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------DDGAVVVFLD 282

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
                  +   GD +   + K DG Y Y   D+A    +Y     D +I    +  + + 
Sbjct: 283 E-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILFTDARQTLHA 337

Query: 365 KRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
           ++   +         +  +      + L +DG P K   R G  + L  ++DE       
Sbjct: 338 QQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLLDEAIERATT 395

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               V   +V++  L +  +    FD+  +    + N   Y+QY
Sbjct: 396 LIEQKNPDLSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNMLSF-EGNTAPYMQY 454

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           AY R RSIF +A     D+  ++            +  E  L V L ++  V+       
Sbjct: 455 AYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQFEEVLLLVAKDG 505

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P+ L  YL++LA +F   +           + +++ K    RL+L    A  +  GL +
Sbjct: 506 MPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAALTAKTLKQGLQL 558

Query: 577 IGVESPNEM 585
           +G+++  +M
Sbjct: 559 LGIKTVEKM 567


>gi|254422588|ref|ZP_05036306.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190077|gb|EDX85041.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 585

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 130/618 (21%), Positives = 226/618 (36%), Gaps = 77/618 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +   R++  L         E +  D I++    +   G    N AM L++PL ++P  IA
Sbjct: 7   ELKDRVQAAL---VAAFGDEYQETDPILVG-TNNPKFGDYQANVAMSLAKPLRMNPRAIA 62

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             I A + +    +   IAG GFIN  L   YL + L  +  S    G        KV +
Sbjct: 63  TKITANLDVTNICEPPSIAGPGFINFKLKTEYLEQQLKEMHSSD-RLGVPKANPPQKVIV 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ S N    MHVGH R AV+G+  A ++ F G++V +  ++ D G     L   +   Y
Sbjct: 122 DYPSPNIAKEMHVGHLRPAVIGECFARVLEFLGHDVLKVSHVGDWGTPFGMLIAYLQEAY 181

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                                     ELA  Y      F  ++     K+ + QA++K+ 
Sbjct: 182 PDP-------------QAAAAASTTGELATFYRQAKKRFDTDEA---FKENARQAVVKLQ 225

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI---RDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             D   L     +       +R     +    DIID        Y   +     K     
Sbjct: 226 AGDQAVLEAWQRVCQLSKRSYRKIYDLLNISEDIIDRGESFYNPYLADVVTDLDKAGLLV 285

Query: 303 DMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
           + D  + +F    +   G+ +   + KS+G Y Y   DLA  + +  E   D ++Y   +
Sbjct: 286 EDDGAKCVFLEGFTNKDGEPLPLIVQKSNGGYNYATTDLAALRYRITEDKVDRIVYSTDA 345

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
             + +  +   VA         + +       L +     ++  R+G+ + L+ ++DE  
Sbjct: 346 GQANHFSQFFQVARRAGWVPESVELSYAPFG-LVQGEDGKRLKSRSGEVVPLQELLDEAI 404

Query: 417 -----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                                        VG  +V++  L +       F + ++    +
Sbjct: 405 ARTRTDVEGRLQQEERTESDDFIQNVAEKVGIGAVKYADLSQNRISNYTFSYDRMLAL-Q 463

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+ YAY R + I R+ +     LD          Q    + SEL L  HL +   
Sbjct: 464 GNTAPYMMYAYVRVQGISRKGEIDLSTLDA---------QVKLTEESELTLAKHLLQLDE 514

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+        P +L  YL++L+  F+  +           +QA   +    RL L    A
Sbjct: 515 VLAEVEKELLPNRLCQYLFELSQKFNQFYDQC------SVLQAEEPQ-RTSRLVLCDLTA 567

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G++    M
Sbjct: 568 RTLKLGLSLLGIDVLERM 585


>gi|325201801|gb|ADY97255.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 572

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 120/618 (19%), Positives = 239/618 (38%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L            +E              +V++  ++  HG    N  M  ++    +
Sbjct: 1   MNLHQTVE-------REAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +     +G     K 
Sbjct: 54  PRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIHAALND-ARFGIAQTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ +  F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVSEFMGNTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVQKGLAVE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +      D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L   +         +          + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            E                           VG  +V++  L +  +    FD+  +    +
Sbjct: 394 TEAVERATALVKEKNPELGTDEAGKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A +   +    L            +  E QL   L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAGEWDANAPTVL-----------TEPLEKQLAAELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++      P+ LA YLY +A++F   +           ++A        RLQL     
Sbjct: 502 VLQSVADTAYPHYLAAYLYQIATLFSRFYEAC------PILKAEGAS-RNSRLQLAKLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G++  + M
Sbjct: 555 DTLKQGLDLLGIDVLDVM 572


>gi|262170936|ref|ZP_06038614.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892012|gb|EEY37998.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 577

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 232/617 (37%), Gaps = 72/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  + R+   ++                ++ +      G    N  M  ++ LG +
Sbjct: 1   MNIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ++       IAG GFIN++LS  +L     + +            K 
Sbjct: 55  PREFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADERLGVAQEAPK- 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  +
Sbjct: 114 -TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIAN 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R Q+       +L +               + K   E   F E     +VK      
Sbjct: 173 L-ERVQKESGEISMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDP 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K   
Sbjct: 224 FCLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPLIVSDLKAKGLA 279

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y +
Sbjct: 280 VED-DGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFI 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +   +         Q+++      + L +DG P K   RAG  + L  ++D
Sbjct: 339 DSRQHQHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLD 396

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           V   +V++  L +  +    FD+  +    + 
Sbjct: 397 EAEERAKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEG 455

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   
Sbjct: 456 NTAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEA 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++     +P+ +  YL++LA +F   +           + A    +   RL+L    A 
Sbjct: 507 VQSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESVKQSRLKLAALTAK 560

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL ++G+E+   M
Sbjct: 561 TIKQGLALLGIETLERM 577


>gi|261400736|ref|ZP_05986861.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209505|gb|EEZ75960.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 572

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/587 (20%), Positives = 238/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQAVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A +      RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAESAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|210134514|ref|YP_002300953.1| arginyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238065089|sp|B6JKP5|SYR_HELP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|210132482|gb|ACJ07473.1| arginyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 541

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 162/554 (29%), Positives = 275/554 (49%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +     +G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDFLERFTQKALELKERFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + I+  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEILSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D S T
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSCT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y A D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +    +  +  E  L+      P+ +E++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLTNLNAEEKYLLFSALSLPKAVESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  + +
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLTN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|56403814|emb|CAI29693.1| hypothetical protein [Pongo abelii]
          Length = 659

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 131/623 (21%), Positives = 258/623 (41%), Gaps = 77/623 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RP 56
            + +       + +K     ++        +++   +    G    N+AM +S     + 
Sbjct: 75  NVISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     
Sbjct: 130 QKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  +I D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHIGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL + +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 --AWKLICDVSRQELNKIYDALDVSLIERGESFYQ---DMMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                       D ++++F   + G  +   +LKSDG YTY  +DLA  K +       +
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKAMI 403

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L  
Sbjct: 404 IYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMD 463

Query: 413 VVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
           ++ E                             +    V++  L         F F K+ 
Sbjct: 464 LLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKML 523

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502
           +  K N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +
Sbjct: 524 D-DKGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCI 577

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L
Sbjct: 578 LRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLL 636

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AVA+++  G +I+G++    M
Sbjct: 637 CEAVAAVMAKGFDILGIKPVQRM 659


>gi|325205746|gb|ADZ01199.1| arginyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 572

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+  +   D    
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKTGEWDADAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|229522032|ref|ZP_04411449.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|254226080|ref|ZP_04919678.1| arginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621392|gb|EAZ49728.1| arginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|229340957|gb|EEO05962.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 599

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|332140679|ref|YP_004426417.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693246|sp|B4RU34|SYR_ALTMD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|327550701|gb|AEA97419.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 576

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 136/615 (22%), Positives = 238/615 (38%), Gaps = 69/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A   +R    L+E+  +          + + R      G    N AM L++ L   
Sbjct: 1   MNIHALLVNRFTEALQEMGVENAP-------VPVSRSARPEFGEYQFNGAMALAKQLKQK 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  +K+D     + +AG GFIN++L+ ++L       +              
Sbjct: 54  PRDIAEKIVETVKLDDIASKLEVAGPGFINVHLNDAWLANQCELSLTDPRLGIAKSPE-- 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +  ++ F G+ V R+ ++ D G Q   L   
Sbjct: 112 QNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWGTQFGMLLAH 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+ +        E +Y    ++            E   F +     +VK     A
Sbjct: 172 LSDKLQEEVAETALSDLEDFYREAKVRF----------DEEEGFADRAREYVVKLQGGDA 221

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               + +    ++I H    SE+ + + + S  R  I   +        ++   K+K   
Sbjct: 222 QCLALWEKFIDVSITH----SEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKTKGLA 277

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
             D    Q++F    +   G+     + KS G Y Y   DLA  + +  +   D  + + 
Sbjct: 278 VED-QGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILT 336

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSK------------- 402
            +  + + K+ E V       K +     C   + L  DG P K                
Sbjct: 337 DARQALHFKQTEIVGRKAGFMKEEQTYEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEA 396

Query: 403 --RAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RAG  I  R           V  +VG  +V++  L +  +    F++  +    + N 
Sbjct: 397 VERAGKLIAERDNDLSEEELKEVARKVGIGAVKYADLSKNRTTDYMFNWDSMLSF-EGNT 455

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R +S+FR+A      +  D+            +  E  L V L ++  VI 
Sbjct: 456 APYLQYAYTRVKSLFRKAGVDMATMPVDI---------KLVEKQEHALAVLLMQFEEVIG 506

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +    P+ L  YLYD+AS F   +      P L+  +    ++   RL L   VA  +
Sbjct: 507 MVSREATPHVLCTYLYDVASAFMTFYEAC---PMLK--EGIEPQVRDSRLALSALVAKTL 561

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+E+  +M
Sbjct: 562 EKGLTLLGIETLEKM 576


>gi|239997007|ref|ZP_04717531.1| arginyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 576

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 139/615 (22%), Positives = 237/615 (38%), Gaps = 69/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A   +R    L+E+  +          + + R      G    N AM L++ L   
Sbjct: 1   MNIHALLVNRFTEALQEMGVENAP-------VPVSRSARPEFGEYQFNGAMALAKQLKQK 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  +K+D     + +AG GFIN++L+  +L       +            K 
Sbjct: 54  PRDIAEKIVETVKLDDIASKLEVAGPGFINVHLNDEWLSNQCELSLTDPRLGIAKS--KE 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD +  ++ F G+ V R+ ++ D G Q   L   
Sbjct: 112 QNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHNVIRQNHMGDWGTQFGMLLAH 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q  +        E +Y    ++            E   F +     +VK     A
Sbjct: 172 LSDKLQDEVAETALSDLEDFYREAKVRF----------DEEEGFADRAREYVVKLQGGDA 221

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               + +    ++I H    SE+ + + + S  R  I   +        ++   K+K   
Sbjct: 222 QCLALWEKFIDVSIAH----SEEVYDKLNVSLTRKDIMGESAYNDDLANVISDLKAKGLA 277

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
             D    Q++F    +   G+     + KS G Y Y   DLA  + +  +   D  + + 
Sbjct: 278 VED-QGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGKLNADRTLILT 336

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSK------------- 402
            +  + + K+ E V       K +     C   + L  DG P K                
Sbjct: 337 DARQALHFKQTEIVGRKAGFMKEEQTYEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEA 396

Query: 403 --RAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RAG  I  R           V  +VG  +V++  L +  +    F++  +    + N 
Sbjct: 397 VERAGKLIAERDNDLSEDELKEVAHKVGIGAVKYADLSKNRTTDYMFNWDSMLSF-EGNT 455

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R +S+FR+A      +D    P ++   E      E  L V L ++  VI 
Sbjct: 456 APYLQYAYTRVKSLFRKAG-----VDMATMPVDINIAEK----QEHALAVLLMQFEEVIG 506

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +    P+ L  YLYD+AS F   +      P L+        +   RL L   VA  +
Sbjct: 507 TVSREATPHVLCTYLYDVASAFMSFYEAC---PMLK--DGIEPAVRDSRLALSALVAKTL 561

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+E+  +M
Sbjct: 562 EQGLTLLGIETLEKM 576


>gi|238021933|ref|ZP_04602359.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147]
 gi|237866547|gb|EEP67589.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147]
          Length = 570

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 127/587 (21%), Positives = 236/587 (40%), Gaps = 74/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I ++  +D   G    N  M  ++ L  +P  +A+ I   +  +P   +  +AG GFINL
Sbjct: 25  IALQPAKDAKFGDFQINGVMGAAKSLKQNPRELAQKIAGLLAANPLFTAAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+P ++   LS    +    G   + K   V I++ S N    MHVGH R +++GD+LA
Sbjct: 85  RLNPEFIAAQLS---AADSRLGVATVAKSKTVVIDYSSPNLAKEMHVGHLRSSIIGDSLA 141

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G++V R+ ++ D G Q   L   +  + Q       +DL + Y          +
Sbjct: 142 RVLGFLGHKVIRQNHVGDWGTQFGMLVAYLAEQQQDDANFRLADLEQFYRNAKVRFDEDE 201

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHR 267
             A+     ++     +E  L   + +   ++   + + + L  L  + D+   E  ++ 
Sbjct: 202 NFANTAREYVVKLQGGDETVLSWWRKFVDISLQHAETVYEKLGLLLERGDV-AGESSYN- 259

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                +++++D L + G   +          T+   +D  +        GD     + K 
Sbjct: 260 ---DDLQNVVDELLQHGLAVD-------DNGTKVMFLDELK-----NQDGDPQPFIIQKQ 304

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
           DG + Y   DLA  + +      D ++YV+ +  S + ++L A           +    +
Sbjct: 305 DGGFLYATTDLACVRHRVRNLHADRILYVVDTRQSLHFQQLFAATRKAGWLPENVEAEFI 364

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++DE                           VG
Sbjct: 365 GFGTMMGKDGKPFK--TRSGDTVKLVELLDEATERATALVKEKNPELPADTAAQIGRAVG 422

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+ R+A          
Sbjct: 423 IGAVKYADLSKNRNSDYIFDWENMLSF-EGNTAPYLQYAYTRVQSVLRRAGAWNETAPLQ 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +            +  E QL V L ++  V+ +      P+ LA YLY LA++F   +  
Sbjct: 482 IK-----------EPLEQQLAVELLKFEDVLNSVAETSFPHYLANYLYQLAALFSRFYEA 530

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       + +GL ++G+E  + M
Sbjct: 531 C------PILKAEG-ATRDTRLQLAKLTGETLKTGLGLLGIEVLDVM 570


>gi|325134676|gb|EGC57316.1| arginyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325143433|gb|EGC65760.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 572

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQAVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+  +   D    
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKTGEWDADAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|308389652|gb|ADO31972.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325208446|gb|ADZ03898.1| arginyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 572

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 237/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSNYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 477 ----DATAPTVLSEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A +      RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAESAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|197334256|ref|YP_002155601.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690276|sp|B5FC42|SYR_VIBFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|197315746|gb|ACH65193.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 577

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 126/622 (20%), Positives = 233/622 (37%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQSLINDKVSQALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKRLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADKRLGVAKE--EQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G+ VTR  +I D G Q   L  +
Sbjct: 113 QNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVTRANHIGDWGTQFGMLIAN 172

Query: 181 V--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL------NFPEEKWLPI 232
           +    + +  +    SDL   Y     L    +E A      ++       F  E W  +
Sbjct: 173 LERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTARGYVVKLQSGDEFCAEMWKKL 232

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V    VQ      R     +++  D  + E  ++    S +  I+ +L +QG   E    
Sbjct: 233 VDVTMVQNQRNYDRL---NVSLTRDNVMGESMYN----SMLAPIVADLQKQGLAVE---- 281

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
              S+  Q   +D  +        G+ +   + K DG + Y   D+A  K +YE    D 
Sbjct: 282 ---SEGAQVVFLDEYK-----NKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELNADR 333

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          +++      + L +DG P K   RAG  + L
Sbjct: 334 VLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRL 391

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           V   +V++  L +  +    FD+  + 
Sbjct: 392 ADLLDEAEERAAKLIEEKNKDLPAEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNML 451

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  SIF +A          L    +  +    D  E  L+  L 
Sbjct: 452 -AFEGNTAPYMQYAYTRVASIFSKAG---------LSMDELTGEVKITDEKEKALVAKLM 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   ++      +P+ +  YL++LA  F   +           +   +  +   RL+L 
Sbjct: 502 QFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEAC------PILNNEDDAVKQSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  I  GL ++G+E+   M
Sbjct: 556 ALTAKTIKQGLELLGIETLERM 577


>gi|325142687|gb|EGC65068.1| arginyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198629|gb|ADY94085.1| arginyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 572

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/587 (19%), Positives = 236/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQAVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPESVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGSIKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A +      RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAESAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|59711446|ref|YP_204222.1| arginyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354336|sp|Q5E6L2|SYR_VIBF1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|59479547|gb|AAW85334.1| arginyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 577

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 126/622 (20%), Positives = 233/622 (37%), Gaps = 82/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  + ++   L+                 + +      G    N  M +++ LG +
Sbjct: 1   MNIQSLINDKVSQALEAAGAPAGSPA------AVRQSAKAQFGDYQANGVMGVAKRLGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +D       IAG GFIN++LS  +L K   + +            + 
Sbjct: 55  PREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQAEAALADERLGVAKE--EQ 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  ++ + N    MHVGH R  ++GD +   + F G+ VTR  +I D G Q   L  +
Sbjct: 113 QNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVTRANHIGDWGTQFGMLIAN 172

Query: 181 V--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL------NFPEEKWLPI 232
           +    + +  +    SDL   Y     L    +E A      ++       F  E W  +
Sbjct: 173 LERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTARGYVVKLQSGDEFCAEMWKKL 232

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V    VQ      R     +++  D  + E  ++    S +  I+ +L +QG   E    
Sbjct: 233 VDVTMVQNQRNYDRL---NVSLTRDNVMGESMYN----SMLAPIVADLQKQGLAVE---- 281

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
              S+  Q   +D  +        G+ +   + K DG + Y   D+A  K +YE    D 
Sbjct: 282 ---SEGAQVVFLDEYK-----NKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELNADR 333

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++Y + S    ++ +   +          +++      + L +DG P K   RAG  + L
Sbjct: 334 VLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFGMMLGKDGRPFK--TRAGGTVRL 391

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           V   +V++  L +  +    FD+  + 
Sbjct: 392 ADLLDEAEERATKLIEEKNKDLSAEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNML 451

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  SIF +A          L    +  +    D  E  L+  L 
Sbjct: 452 -AFEGNTAPYMQYAYTRVASIFSKAG---------LSMDELTGEVKITDEKEKALVAKLM 501

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   ++      +P+ +  YL++LA  F   +           +   +  +   RL+L 
Sbjct: 502 QFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEAC------PILNNEDDAVKQSRLKLA 555

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  I  GL ++G+E+   M
Sbjct: 556 ALTAKTIKQGLELLGIETLERM 577


>gi|208434266|ref|YP_002265932.1| arginyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238065090|sp|B5ZA86|SYR_HELPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|208432195|gb|ACI27066.1| arginyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 541

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 163/554 (29%), Positives = 276/554 (49%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHKKTQGLFDSVVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S  +L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLGFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +       PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIGVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLVKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLTGDVIYHDKKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ VVD+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +       +  E  L+      P+ IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLKNLNAEEKYLLFSALSLPKAIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +   T   L++   V+  + +
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKTKELLKICLMVSLSLTN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|325130593|gb|EGC53340.1| arginyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 572

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 123/618 (19%), Positives = 241/618 (38%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L            +E              +V++  ++  HG    N  M  ++    +
Sbjct: 1   MNLHQTVE-------REAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I   +  +  ++S  +AG GFINL L P +L + + + +     +G     K 
Sbjct: 54  PRELAQKIADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALND-ARFGVAKTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ +  F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVSEFMGNTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVQKGLAVE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +      D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L   +         +          + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            E                           VG  S+++  L +  +    FD+  +    +
Sbjct: 394 TEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKNRTSDYVFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A +   +    L            +  E QL   L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAGEWDANAPTVL-----------TEPLEKQLAAELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++      P+ LA YLY +A++F   +      P L+   A+       RLQL     
Sbjct: 502 VLQSVADTAYPHYLAAYLYQIATLFSRFYEAC---PILKAEGAS----RNSRLQLAKLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G++  + M
Sbjct: 555 DTLKQGLDLLGIDVLDVM 572


>gi|218768489|ref|YP_002343001.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|23822208|sp|Q9JTM7|SYR_NEIMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|121052497|emb|CAM08836.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 572

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 237/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSNYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 477 ----DATAPTVLSEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A +      RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAESAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|206895636|ref|YP_002246999.1| arginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738253|gb|ACI17331.1| arginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 526

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 164/577 (28%), Positives = 273/577 (47%), Gaps = 57/577 (9%)

Query: 11  LKNYLKEIDCKI-KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++  + E   K+  +  + +  + I+   D   G  +     +L++ L   P  IA+ I 
Sbjct: 5   IRTAITESTQKVFGLSTEDMPALDIQFTPDITMGDYAVPIGFVLAKKLRTAPEKIAQTIA 64

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             ++     +    A KG++N+ +   +    LS   +S  +Y         KV +E+VS
Sbjct: 65  ENLQGPFRAE----AVKGYVNVTMDDDWWLDRLSQGFISYPQY-------SGKVLVEYVS 113

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           ANPTGP+H+GH R AVVG  LA+L+         E+Y+NDAG QI     SV  R ++ L
Sbjct: 114 ANPTGPIHIGHGRGAVVGSVLANLLDRVYDFADSEFYVNDAGEQIRKFCKSVEIRIRE-L 172

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
              D +LPE  Y G Y+  + K + D+Y+       E++   ++ + +V  M K  ++ L
Sbjct: 173 KGEDVELPEDAYHGDYVVDIAKSILDRYN--WDALSEDEQWNVLWNDAVDMMRKWHKETL 230

Query: 250 KALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           + L +   ++ SE      G P  +   I  L  +GY YE                    
Sbjct: 231 EKLGVTMKVWTSERLIRQEGWPERV---IQLLQDKGYAYE----------------QDGA 271

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L F+ST+ GDD DR L+KS+G YTY+  D+AY   K  RG++ +I V G+DH G+V R+ 
Sbjct: 272 LWFKSTIFGDDKDRVLVKSNGEYTYYLVDIAYHMEKIHRGYNVLINVWGADHIGHVPRMN 331

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   A+      + V+L + VR +R G+ + MSKR G+F+TL  ++DE+G D+ R M + 
Sbjct: 332 AALTALGF-PDCLTVVLVQTVRFWRQGVAVAMSKRKGEFLTLDELIDEIGKDAARIMFIT 390

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           R     +DFD    K+++ +NPV+Y+QYAY R ++I  + ++                  
Sbjct: 391 RSVDATIDFDIEVAKQKAMDNPVYYIQYAYVRAKNILTRTEERQFGSSVG---------- 440

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
             FD  E  L+  L  +   +  A    +P+ +  Y ++L+  FH  +   R        
Sbjct: 441 --FDPHERTLLRLLNAFQERMVLAVRKLDPFVIESYAWELSDAFHKFYQFDRVIGS---- 494

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +    R +LV     ++     ++G+E    M
Sbjct: 495 -----EYENARWKLVERFTEVMEELFTLLGIEKLERM 526


>gi|229513729|ref|ZP_04403191.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229348910|gb|EEO13867.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 599

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 231/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++           +   +          G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPALVRQSV------KAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNPELSAEEKTNIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|225181879|ref|ZP_03735314.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167393|gb|EEG76209.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 564

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 129/618 (20%), Positives = 241/618 (38%), Gaps = 87/618 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F       K  ++ +  ++ ++K+ +    +E P     G  +      L++ L   
Sbjct: 1   MEMFR------KEIVRLLSEQLPLDKQQIAN-DLETPPTPEMGDFAF-PCFKLAKELRNA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      D V   G  +IN +     L +  L  +     ++G+   G 
Sbjct: 53  PPKIAAELAEKLPASELFDRVEARGP-YINFFCDRKMLAQLTLDEVQTEREKFGQRKSGS 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V I+F + N   P  VGH R  V+G++L  +    GY+     ++ D G Q   L +
Sbjct: 112 GQTVVIDFSAPNIAKPFGVGHLRSTVIGNSLYRIHEALGYKSVGINHLGDWGTQFGKLIV 171

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---Y 236
           +         + +D+ L E     +Y  +V      +     L+     W   ++D    
Sbjct: 172 AYL------KWGDDTRLEEDPITYLYELYVRFHREAEEKPA-LDEEARAWFKKLEDGDEQ 224

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293
           + Q   +     L      ++I     D ++G+      + D +  +  +G         
Sbjct: 225 ARQLWQRFRDLSLAEFKRIYNILGVHFDSYQGESYYNEMLDDTVREVETKGLT------- 277

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNM 352
             S+     +++   +              L K DG+  Y   DL     +++   F  M
Sbjct: 278 EVSEGALIVNLEDSNM----------PPCLLRKQDGATLYATRDLCAAIYRHQMHDFSKM 327

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +YV+G+D + + +++ AV   +  + A+    +   +  +++G   KMS R G  I L  
Sbjct: 328 LYVVGADQALHFQQVFAVLKKLGYEWAENCTHVPFGLIRFKEG---KMSTRQGTLIFLED 384

Query: 413 VVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           V++                         +VG  +V F  L     + ++FD+ KV + S 
Sbjct: 385 VLNRATELAHQIIQEKNPQLENKYEVAKKVGIGAVIFGDLSNDRVKNIEFDWDKVLDFSG 444

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           E    Y+QY++AR  SI R+A       D  L               E  ++  +A +  
Sbjct: 445 E-TAPYIQYSHARICSILRKAAAWPAPFDATLL----------VSDEEQLVLGTIARFSD 493

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I  A    +P  LA YL DLA+ F+  +           + A +  +   RL L+ AV 
Sbjct: 494 AIARAADTLKPSVLARYLLDLAAAFNRFYHQC------PVLNAED-DIRNARLALIDAVR 546

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++G+E+P EM
Sbjct: 547 QVLVNGLYLLGIEAPEEM 564


>gi|153213687|ref|ZP_01948939.1| arginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153801962|ref|ZP_01956548.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124115748|gb|EAY34568.1| arginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124122476|gb|EAY41219.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 599

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNLELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|229524081|ref|ZP_04413486.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229337662|gb|EEO02679.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 599

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFDEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|254805273|ref|YP_003083494.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668815|emb|CBA06810.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 572

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHAALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++DNL ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDNLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|325136599|gb|EGC59200.1| arginyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 572

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 237/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDMAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSNYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 477 ----DATAPTVLSEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A +      RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAESAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|262191347|ref|ZP_06049538.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032766|gb|EEY51313.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 592

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 17  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 70

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 71  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 128

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 129 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 189 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 240 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 295

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 296 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 355 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 412

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 413 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 471

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 472 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 522

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 523 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 576

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 577 IKQGLALLGIDTLERM 592


>gi|297579579|ref|ZP_06941507.1| arginyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297537173|gb|EFH76006.1| arginyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 599

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 231/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +               
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQE--SPK 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDGVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|15642074|ref|NP_231706.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586898|ref|ZP_01676678.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121727379|ref|ZP_01680518.1| arginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|153818393|ref|ZP_01971060.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153821699|ref|ZP_01974366.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227082200|ref|YP_002810751.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507837|ref|ZP_04397342.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511927|ref|ZP_04401406.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519063|ref|ZP_04408506.1| arginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229607382|ref|YP_002878030.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254849161|ref|ZP_05238511.1| arginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298497899|ref|ZP_07007706.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9656621|gb|AAF95220.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121548834|gb|EAX58877.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121630271|gb|EAX62669.1| arginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126511083|gb|EAZ73677.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126520797|gb|EAZ78020.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227010088|gb|ACP06300.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229343752|gb|EEO08727.1| arginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351892|gb|EEO16833.1| arginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355342|gb|EEO20263.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370037|gb|ACQ60460.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254844866|gb|EET23280.1| arginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297542232|gb|EFH78282.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 599

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|229528909|ref|ZP_04418299.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332683|gb|EEN98169.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 591

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 16  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 69

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 70  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 127

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 128 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 187

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 188 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 239 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 294

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 295 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 353

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 354 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 411

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 412 AQERAKALIESKNPELSAEEKAAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 470

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 471 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 521

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 522 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 575

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 576 IKQGLALLGIDTLERM 591


>gi|332709098|ref|ZP_08429067.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352149|gb|EGJ31720.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 585

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 140/620 (22%), Positives = 241/620 (38%), Gaps = 75/620 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +      +    L         +   +D +++    +   G   +N A+ LS+ L   P 
Sbjct: 4   IVEQLRLQFTQALTAAFGS---DVAGVDPMMV-PASNPKFGDYQSNVALALSKRLKQPPR 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE ++  I +     S  IAG GFINL L P+YL + L  I       G  +     +
Sbjct: 60  AIAESLLQYIDVAEICQSPTIAGPGFINLSLKPAYLEERLREIHTD-PRLGVAVAPAPRQ 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD++A ++ F G  V R  ++ D G Q   L   + 
Sbjct: 119 VIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQNVLRLNHVGDWGTQFGMLITYLR 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQA 240
             Y  AL   D+ L  G    +Y +   +  AD+   E       K      D   + Q 
Sbjct: 179 EAYPSALTTADA-LDLGDLVTLYRQAKQRFDADEEFREASRLEVVKLQSGAADSRRAWQL 237

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    R + + +    DI ++E      + + + +++D L + G + E            
Sbjct: 238 LCDQSRREFQIIYDLLDIQLTERGESFYN-TLLPEVVDYLDKSGLLVE------------ 284

Query: 301 KCDMDRKQLLFR--STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMG 357
             D   K +     +   G+ +   + KSDG Y Y   DLA  + + E+     +IYV  
Sbjct: 285 --DSGAKCVFLEGFTNKDGEPLPLIVQKSDGGYNYATTDLAALRYRTEQDQAQRIIYVTD 342

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S  + +  ++  VA         + V+     + L  DG   K+  R+G+ + LR ++DE
Sbjct: 343 SGQANHFAQVFQVARRTGILPENVEVVHVPFGLVLGEDGK--KLKTRSGETVRLRDLLDE 400

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG  +V++  L +  +    F F K+   
Sbjct: 401 AIARSGADLESRLKQEGREETEEFKEHVAKVVGMSAVKYADLSQNRTSNYIFSFDKMLAL 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAY R + I R+      ++DF+    +      E   +EL L   L + 
Sbjct: 461 -QGNTAPYMLYAYVRIQGISRKG-----EIDFEQLGTDAKILLQE--DAELVLGKKLLQL 512

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+        P +L  YL++L+  F+  +           ++A   K    RL L   
Sbjct: 513 SEVLGEVEKELMPNRLCQYLFELSQKFNQFYDQC------PVLKAEEPK-RTSRLLLCDL 565

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL ++G++    M
Sbjct: 566 TARTLKLGLYLLGIQVLERM 585


>gi|332295566|ref|YP_004437489.1| Arginyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178669|gb|AEE14358.1| Arginyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 541

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 170/585 (29%), Positives = 291/585 (49%), Gaps = 44/585 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M  +       + ++ ++  +IK     ++ I I  P+   +G  +  ++M L++ L  D
Sbjct: 1   MSFYNHLKKETQKHITKLYPEIKNPASFVE-IQISNPQ---YGDYTILSSMKLAKHLKED 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA  +    K D    SV +A  GFIN+ L    L+ IL +  +             
Sbjct: 57  PIKIANKLAQSFKDDDF--SVQVANPGFINISLKEHALQNILQNFTIE----PYLNSSNS 110

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + IE+VSANPTGP+H+GH R A  GD+L  ++   G+ V  E+Y+N+ G Q+    LS
Sbjct: 111 KTILIEYVSANPTGPLHIGHARWAAFGDSLTRILKDYGFNVQTEFYVNNYGNQMELFTLS 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  R ++ L   D D PEG Y G Y+  + K++ +KY   L    +     ++K+ ++  
Sbjct: 171 IIARMREILK-QDYDFPEGGYQGEYVVDIAKKILNKY-PFLSKDDQNLHFELIKEEALNI 228

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +   ++ LK   +  D F  E   H+ +   I  II+ L  +   Y+            
Sbjct: 229 ALGEQKETLKNFGVIFDSFFFESSLHQEN--KINKIIELLISKNQTYK------------ 274

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                   L  +++   D  DR L++ +G  TYFAAD+AY   K++R FD  I + G+DH
Sbjct: 275 ----KDGALWLKTSNYFDSEDRVLIRENGLPTYFAADIAYHYEKFKRNFDIYINIWGTDH 330

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GY+ RL++   A+   + ++ VLL +LV LY++   I+MSKR G+ ITL+ ++++VG D
Sbjct: 331 HGYIPRLKSALKALDLPEEKLVVLLGQLVNLYKNKNLIRMSKRTGNMITLKELLEDVGHD 390

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RF +  R  +  +DF   K KE + +NP++Y+QYA AR  SI R   +  P  + + +
Sbjct: 391 ILRFYLTSRSLNSTIDFHIEKAKEVTMDNPLYYIQYACARISSIRRNIDEEIP-ANLNEY 449

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            + +   E      E ++I  +  +    E A    EPY L  Y+ DLA +FH ++   R
Sbjct: 450 SKYIKTAE------EYEIIKKIDNFDFFREKAVRDYEPYYLVNYMLDLARLFHIYYQKNR 503

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +   ++ +   RL L+  V +I++ GL+ + +    +M
Sbjct: 504 -------IINQDKSIQWSRLFLILKVHNILSRGLSYLNIIPMEKM 541


>gi|327484607|gb|AEA79014.1| Arginyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 592

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 17  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 70

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 71  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 128

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 129 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 189 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 240 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 295

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 296 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 355 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 412

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 413 AQERAKALIESKNPELSAEEKAAIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 471

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 472 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 522

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 523 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 576

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 577 IKQGLALLGIDTLERM 592


>gi|282899871|ref|ZP_06307832.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195141|gb|EFA70077.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii
           CS-505]
          Length = 585

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 143/609 (23%), Positives = 242/609 (39%), Gaps = 80/609 (13%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
            +  +   +   +D I++    +   G    N A+ LS+ LG+ P  IA  IV  + +  
Sbjct: 15  ALVARFGEDYMQVDPILVAAS-NPKFGDFQANVALSLSKKLGMQPRAIATSIVEELDVSD 73

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
             +   IAG GFINL L  SYL   L++I       G   + +  K  ++F S N    M
Sbjct: 74  MCEVPEIAGPGFINLKLQTSYLESQLNAIKTD-PRLGVTRVDQPEKQIVDFSSPNIAKEM 132

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R  ++GD +A ++ F G++V R  ++ D G Q   L   +   Y QAL   +  L
Sbjct: 133 HVGHLRSTIIGDCIARILEFRGHQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANV-L 191

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--------YSVQAMMKIIRDD 248
             G     Y +      A +      +F E     +VK         ++ + +    R +
Sbjct: 192 NIGDLVSFYRQ------AKQRFDADASFQERARQEVVKLQAGAEDTTHAWKLLCAQSRKE 245

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            + +    DI I E      +P  +  I+ +L   G V E        +  +   ++   
Sbjct: 246 FQTIYDLLDIKIIERGESFYNP-FLSKIVKDLETAGLVEEN-------QGAKCVFLEG-- 295

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRL 367
               +   G+ +   + KSDG Y Y   DLA    +  E     +IYV  +  + +  + 
Sbjct: 296 ---FTNREGEALPLIVQKSDGGYNYATTDLAALLYRIREDQAKRIIYVTDAGQANHFAQF 352

Query: 368 EAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416
             VA       A +  V +   + L  DG   K   R+GD + L+ ++DE          
Sbjct: 353 FQVAQKAGWIPADVELVHIPFGLVLGEDGK--KFKTRSGDTVRLKDLLDEAVFRARTDLE 410

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F + K+    K N   Y+ 
Sbjct: 411 ARLQQEGRQETPEFIQNVAQTVGISAVKYADLSQNRTSSYVFSYDKMLSL-KGNTAPYML 469

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R + I R+ K  F +L  D     +I QE     +EL L  +L +   ++      
Sbjct: 470 YAYVRTQGISREGKIDFENLAPD---AKIILQE----ETELALAKNLLQLDEILYQVEQD 522

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P +L  YLY+L+  F+  +           ++A +  +   RL L +  A  +  GLN
Sbjct: 523 LLPNRLCDYLYNLSEKFNKFYDRC------PVLKAEDP-IRTSRLMLCYLTAKTLRLGLN 575

Query: 576 IIGVESPNE 584
           ++G++    
Sbjct: 576 LLGIKVIER 584


>gi|254670676|emb|CBA06775.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 572

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 120/618 (19%), Positives = 239/618 (38%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L            +E              +V++  ++  HG    N  M  ++    +
Sbjct: 1   MNLHQTVE-------REAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + +    ++   +G     K 
Sbjct: 54  PRELAQKVAEALAGNAVIESAEVAGPGFINLRLRPEFLAQNI-QTALNDARFGVAKTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ +  F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVSEFMGNTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVQKGLAVE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +      D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L   +         +          + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            E                           VG  S+++  L +  +    FD+  +    +
Sbjct: 394 TEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKNRTSDYVFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A +   +    L            +  E QL   L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAGEWDANAPTVL-----------TEPLEKQLAAELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++      P+ LA YLY +A++F   +           ++A        RLQL     
Sbjct: 502 VLQSVADTAYPHYLAAYLYQIATLFSRFYEAC------PILKAEGAS-RNSRLQLAKLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL+++G++  + M
Sbjct: 555 DTLKQGLDLLGIDVLDVM 572


>gi|262404425|ref|ZP_06080980.1| arginyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349457|gb|EEY98595.1| arginyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 597

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 230/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 22  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 75

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 76  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADERLGVAQEAPK-- 133

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  ++
Sbjct: 134 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANL 193

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+       +L +               + K   E   F E     +VK       
Sbjct: 194 -ERVQKESGEISMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 244

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 245 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPLIVSDLKAKGLAV 300

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 301 ED-DGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 359

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE
Sbjct: 360 SRQHQHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 417

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 418 AEERAKALIESKNPELSTEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 476

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D      ++   E      E  LI  L ++   +
Sbjct: 477 TAPYMQYAYTRVASVFAKAG-----VDMTQLTGHIQITE----EKEKALIAKLLQFEEAV 527

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 528 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESVKQSRLKLAALTAKT 581

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+E+   M
Sbjct: 582 IKQGLALLGIETLERM 597


>gi|147673730|ref|YP_001217600.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|146315613|gb|ABQ20152.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227013971|gb|ACP10181.1| arginyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 599

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPKN- 136

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 137 -IVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|586063|sp|P37880|SYRC_CRIGR RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|478315|pir||JN0870 arginine-tRNA ligase (EC 6.1.1.19) - Chinese hamster
 gi|433544|emb|CAA45012.1| arginine--tRNA ligase [Cricetulus longicaudatus]
          Length = 661

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 133/622 (21%), Positives = 262/622 (42%), Gaps = 78/622 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMIL-----SRPLG 58
           + +SRL++      C IK     LD   +V+   +    G    N+AM +     ++   
Sbjct: 76  NINSRLQDVFG---CAIKAAYPDLDNPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 132

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           ++P  IAE I   +  +  +D V IAG GFIN++L   ++ + L++++V+GI+     +G
Sbjct: 133 VNPRGIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGIQLP--ALG 190

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L 
Sbjct: 191 ENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLI 250

Query: 179 LSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             +  ++   L       DL   Y          +E   +    +++  + K    +K  
Sbjct: 251 AHLQDQFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVSL-QSKDPDFIK-- 307

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +   +  + R +   +    DI + E    F++     ++DI+     +GYV        
Sbjct: 308 AWNLICDVSRAEFNKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGYVQVD----- 359

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMI 353
                     D ++++F   + G  +   ++KSDG +TY  +DLA  K + +E   + +I
Sbjct: 360 ----------DGRKIVF---VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKII 406

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ +  + + + + A A  +     ++  +      +       K   R+G+ + L  +
Sbjct: 407 YVVDNGQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDL 466

Query: 414 VDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + E                             +    +++  L         F F K+ +
Sbjct: 467 LGEGLKRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD 526

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLA 503
             + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   + 
Sbjct: 527 -DRGNTAAYLLYAFTRIRSIARLA-----NVDEEMLQKAARETKIVLDHEKEWKLGRCIL 580

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L 
Sbjct: 581 RFPEILQKMLDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLC 639

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AVA+++  G +I+G++    M
Sbjct: 640 EAVAAVMAKGFDILGIKPVQRM 661


>gi|108562747|ref|YP_627063.1| arginyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373824|sp|Q1CUI3|SYR_HELPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|107836520|gb|ABF84389.1| arginyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 541

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 161/554 (29%), Positives = 275/554 (49%), Gaps = 41/554 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93
           P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+IN  L
Sbjct: 22  PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSIVACKGYINFTL 81

Query: 94  SPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S   L +     +    ++G      +  K+ +EFVSANPTGP+H+GH R AV GD+LA 
Sbjct: 82  SLDLLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +   +   PE +Y G Y+  + K+
Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKENVTYPEVFYKGEYIIEIAKK 201

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +     L    EE  + ++  Y+   M+  I+D+L AL I  D + SE +  +     
Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHK--- 258

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              + + L +   +YE                   ++  +S++  D+ DR L+K D SYT
Sbjct: 259 -DAVFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+ Y   K+++ +   I + G+DH GY+ R++A    +     ++ VLL ++VRL 
Sbjct: 302 YLTGDIVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++
Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA +R  ++  ++     ++        +       +  E  L+      P+ IE++
Sbjct: 422 YIHYANSRIHTMLEKSPFSKEEV--------LQTPLKNLNAEEKYLLFSTLSLPKAIESS 473

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                  K+  Y   LAS FH  ++ G+           +       L++   V+  + +
Sbjct: 474 FEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLSLTN 524

Query: 573 GLNIIGVESPNEMS 586
              ++G+E   ++S
Sbjct: 525 AFKLLGIEIKTKIS 538


>gi|325204484|gb|ADY99937.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 572

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/587 (20%), Positives = 238/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDA 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E         + +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDSAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAPTV 483

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L            +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 484 L-----------TEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|304387091|ref|ZP_07369342.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338840|gb|EFM04943.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 572

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/587 (20%), Positives = 235/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ I   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKIADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGSIKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAPTV 483

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L            +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 484 L-----------TEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEG-ATRNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|255745182|ref|ZP_05419131.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262155960|ref|ZP_06029081.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|255737012|gb|EET92408.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030271|gb|EEY48914.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 592

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 17  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 70

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 71  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPK-- 128

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 129 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 189 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 240 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 295

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 296 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 355 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 412

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 413 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 471

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 472 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 522

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 523 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 576

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 577 IKQGLALLGIDTLERM 592


>gi|258621159|ref|ZP_05716193.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586547|gb|EEW11262.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 597

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 123/616 (19%), Positives = 233/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 22  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 75

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 76  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADERLGVAQEAPK-- 133

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 134 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 193

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 194 -ERVQKASGEISMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 244

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 245 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPLIVSDLKAKGLAV 300

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 301 ED-DGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 359

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE
Sbjct: 360 SRQHQHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 417

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 418 AEERAKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 476

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 477 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 527

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 528 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESVKQSRLKLAALTAKT 581

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+E+   M
Sbjct: 582 IKQGLALLGIETLERM 597


>gi|225075056|ref|ZP_03718255.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens
           NRL30031/H210]
 gi|224953540|gb|EEG34749.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens
           NRL30031/H210]
          Length = 572

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/618 (19%), Positives = 237/618 (38%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+           +E              +V++  ++   G    N  M  ++    +
Sbjct: 1   MNLYQTVE-------REAQAAFAAAGLSDSPVVLQAAKNPDFGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +     +G     K 
Sbjct: 54  PRELAQKVAEALADNAVIESAEVAGPGFINLRLRPEFLAQNIQTALND-ARFGVAKTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ ++ F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVQKGLAVE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +      D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L   +         +          + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            E                           VG  +V++  L +  +    FD+  +    +
Sbjct: 394 TEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A +            +        +  E QL   L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAGEW-----------DATAPTVLTEPLEKQLAAELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++      P+ LA YLY +A++F   +           +  +       RLQL     
Sbjct: 502 VLQSVADTAYPHYLAAYLYQIATLFSRFYEAC-------PILKSEGATRNSRLQLAKLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G++  N M
Sbjct: 555 DTLKQGLELLGIDVLNVM 572


>gi|332971551|gb|EGK10501.1| arginine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 568

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 127/612 (20%), Positives = 244/612 (39%), Gaps = 79/612 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L N +++      +       IV++  +D  HG    N  M  ++  G +P  +A+
Sbjct: 3   LQQTLSNQIEQAFAVAGISG---SPIVLQPAKDAKHGDFQINGVMGAAKKAGQNPRELAQ 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +     + S  +AG GFINL L+  +L + L+S  ++  +           V I+
Sbjct: 60  KVADELHGKGAIASAEVAGPGFINLRLAADFLAENLNSGSLNIEKTP-----NPQTVVID 114

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R +++GD+LA ++AF G+ V R+ ++ D G Q   L   +  + Q
Sbjct: 115 YSSPNLAKEMHVGHLRSSIIGDSLARVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQ 174

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
                  +DL + Y             AD     ++     +   L + + + V+  ++ 
Sbjct: 175 DNAEFKLADLEQFYRNAKVRFDEDAAFADLAREYVVKLQGGDAAVLALWQQF-VEISLQH 233

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                  L ++        E  ++      ++++ID L  +G   E       S   +  
Sbjct: 234 AEAVYAKLGLKLQRADVAGESSYN----DDLQNVIDELTAKGLAVE-------SDGAKVV 282

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS 361
            +D  +        G+     + K  G + Y   D A  + +  + G + ++YV+ +   
Sbjct: 283 FLDEFK-----NKDGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGANRLMYVVDTRQD 337

Query: 362 GYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + K+L + +         ++   +     + +DG P K   R+GD + L  ++DE    
Sbjct: 338 LHFKQLFSASRKAGWLPENVSAEFIGFGTMMGKDGKPFK--TRSGDTVKLVDLLDEAVER 395

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    FD+  +    + N   Y
Sbjct: 396 ATALVREKNADLSAEEVAQIGEVVGIGAVKYADLSKNRTSDYVFDWDNMLSF-EGNTAPY 454

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R +S+F++A +            NV          E QL V L ++  V+ +  
Sbjct: 455 LQYAYTRVQSVFKKAGEW-----------NVQAALKLEQPLEQQLAVELLKFEDVVASVA 503

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ LA YLY LA++F   +           ++A    +   RL+L    A  + +G
Sbjct: 504 ETSYPHYLAAYLYQLATLFSRFYEAC------PILKAQG-DVRDSRLKLAKLTAETMKTG 556

Query: 574 LNIIGVESPNEM 585
           L+++G++    M
Sbjct: 557 LDLLGIDVLEVM 568


>gi|226329867|ref|ZP_03805385.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198]
 gi|225200662|gb|EEG83016.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198]
          Length = 535

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 130/565 (23%), Positives = 232/565 (41%), Gaps = 67/565 (11%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           L + +G+ P  +AE I+ ++ I    D V IAG GFIN++LSP ++ K     +V   E+
Sbjct: 6   LQKKMGIPPRQLAEKILEKLDITDIADKVEIAGPGFINIFLSPQWVAKQAEDALVD--EH 63

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                 +   + I++ S N    MHVGH R  ++GD  A  ++F G+ V R  ++ D G 
Sbjct: 64  LNVTPVEPQTIVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVVRANHLGDWGT 123

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q   L   +  +  +   +      E +Y            A K+  E   F E     +
Sbjct: 124 QFGMLIAYLEKKQNENAADMALSDLEEFYRE----------AKKHYDEDEVFAERARNYV 173

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           VK  S     + +   L  + +Q +       + R + +   D I   +    +  GI+ 
Sbjct: 174 VKLQSGDEYCRTMWRKLVDITMQQNQ----ATYQRLNVTLTEDDIMGESLYNPMLPGIVA 229

Query: 293 PPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348
             K+K     + +   ++F        G+ +   + K DG Y Y   D+A  K ++E   
Sbjct: 230 DLKAKGLA-VESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRHETLH 288

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDF 407
            D ++Y + S    ++ +   +          +++      + L +DG P K   R+G  
Sbjct: 289 ADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSMSLEHHMFGMMLGKDGRPFK--TRSGGT 346

Query: 408 ITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           I L  ++DE                           VG  +V++  L +  +    FD+ 
Sbjct: 347 IRLTDLLDEAQERARALIAEKNPDMDKDELNNVARVVGIGAVKYADLSKNRTTDYIFDWD 406

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +    + N   Y+QYAY R  SIF++A     D+D +   + ++  +S     E QL +
Sbjct: 407 LMLSF-EGNTAPYMQYAYTRVASIFKRA-----DIDENALTQPIVLTQS----HERQLAL 456

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L ++   I   +    P+ +  YLYDLA  F G + +         + A +      RL
Sbjct: 457 RLVQFDETIMQVSREGTPHVMCAYLYDLAQAFSGFYENC------PILSAEDENTRQSRL 510

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           +L    A  +  GL+ +G+E+ + M
Sbjct: 511 KLARLTAKTLKQGLDTLGIETVDRM 535


>gi|13431882|sp|P57851|SYR_PASMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|12720817|gb|AAK02635.1| ArgS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 563

 Score =  412 bits (1059), Expect = e-112,   Method: Composition-based stats.
 Identities = 114/587 (19%), Positives = 221/587 (37%), Gaps = 64/587 (10%)

Query: 30  DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
              ++ +      G    N  M  ++ LG +P   A+ ++ ++ +    + + IAG GFI
Sbjct: 10  SDALVRQSAKVQFGDYQANGIMAAAKKLGRNPREFAQQVIEQLDLSEIAEKIEIAGPGFI 69

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL+L  ++L + +S  V       +    +   V  ++ S N    MHVGH R  ++GD 
Sbjct: 70  NLFLDKNWLAEQISLAVNDDKLGIQ--ATETQTVVADYSSPNVAKEMHVGHLRSTIIGDA 127

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +   + F G +V R  ++ D G Q   L   +     ++    +    E +Y        
Sbjct: 128 VVRTLEFLGNKVIRANHVGDWGTQFGMLIAYLEKVENESASEMELSDLEAFYRA------ 181

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
               A ++      F E+    +VK  S     + +   L  + +Q +      ++ R +
Sbjct: 182 ----AKEHYDSDPVFAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQNQH----NYDRLN 233

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--TMVGDDVDRPLLKS 327
            +     +   +    +   I+   K +     D     +         G+ +   + K 
Sbjct: 234 VTLTEKDVMGESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKEGEPMGVIVQKK 293

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG + Y   D+A  K +YE    D  +    +  S ++++   +            +   
Sbjct: 294 DGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQAWLITRKAGYVPDSFQLEHK 353

Query: 387 EL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
              + L +DG P K   R G  + L  ++DE                           V 
Sbjct: 354 NFGMMLGKDGKPFK--TRTGGTVKLADLLDEAVERATQLIQEKSTALSAQEKAAVIEAVA 411

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +++    DL   
Sbjct: 412 IGSVKYADLSKNRTTDYVFDWDNMLSF-EGNTAPYMQYAYTRIRSIFNRSELNEQDLSES 470

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E  L + L ++   I+       P+ L  YLY+LA VF   + H
Sbjct: 471 PVVLS--------NEKERLLAIKLLQFEEAIQIVAKEGTPHVLCTYLYELAGVFSSFYEH 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +   + ++   RL+L       +  GL+++G+++ ++M
Sbjct: 523 C------PILNNEDEQIKRSRLKLALLTEKTLKQGLDLLGIKTVDKM 563


>gi|262276201|ref|ZP_06054010.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220009|gb|EEY71325.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 576

 Score =  412 bits (1059), Expect = e-112,   Method: Composition-based stats.
 Identities = 120/614 (19%), Positives = 232/614 (37%), Gaps = 73/614 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  + L   +          +     +   +      G    N  M +++ LG +P   A
Sbjct: 2   NIQALLNEKVAVAMVAAGAPEGSPAAVR--QSAKPQFGDYQANGIMGVAKKLGCNPREFA 59

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + ++  +++D       IAG GFIN++LS  +L +   + + S          +   + +
Sbjct: 60  QKVLDVLELDGMASKTEIAGPGFINIFLSSEWLAEQADAALASDRLGVAEA--EKQNIVV 117

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ + N    MHVGH R  ++GD +   + F G+ V R  ++ D G Q   L  ++    
Sbjct: 118 DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHLGDWGTQFGMLIANLERHE 177

Query: 186 QQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
            Q   +  + SD+   Y     L    +E A    + ++       L    +Y  +   +
Sbjct: 178 AQGGDISMDLSDIEGFYRESKKLYDEDEEFAKTARNYVV------RLQSGDEYCKEKWQQ 231

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +++  L+     +D         R + S     +   +    +  GI+   K+K     D
Sbjct: 232 LVKITLEQNQRNYD---------RLNVSLTDKDVMGESMYNDMLAGIVEDLKAKGLAVED 282

Query: 304 MDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
            D   ++F        G+ +   + K DG + Y   D+A  K +YE    D ++Y + S 
Sbjct: 283 -DGAMVVFLDEYKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETFNADRVLYFIDSR 341

Query: 360 HSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
              ++ +   +          +++      + L +DG P K   RAG  + L  ++DE  
Sbjct: 342 QHQHLMQAWTIVRKAGYVPETMSLEHHAFGMMLGKDGKPFK--TRAGGTVRLADLLDEAE 399

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    V   +V++  L +  +    FD+  +    + N  
Sbjct: 400 ARANKLIEEKNPELSAEEKANIATTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTA 458

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAY R  SIF +A      +D D     +I  E      E  L+  L ++   ++ 
Sbjct: 459 PYMQYAYTRVASIFNKAG-----IDADNIEGKIIVAE----DKEKALVSKLLQFEEAVDG 509

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                +P+ +  YL++LA  F   +           + A   +    RL+L    A  I 
Sbjct: 510 VAREGQPHIMCGYLFELAGTFSSFYEAC------PILNAEG-ETKQSRLKLAALTAKTIK 562

Query: 572 SGLNIIGVESPNEM 585
            GL ++G+++   M
Sbjct: 563 QGLELLGIKTLERM 576


>gi|258626716|ref|ZP_05721540.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581012|gb|EEW05937.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 597

 Score =  412 bits (1058), Expect = e-112,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 231/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 22  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 75

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 76  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADERLGVAQEAPK-- 133

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  ++
Sbjct: 134 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANL 193

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+       +L +               + K   E   F E     +VK       
Sbjct: 194 -ERVQKESGQISMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 244

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 245 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPLIVSDLKAKGLAV 300

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 301 ED-DGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 359

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE
Sbjct: 360 SRQHQHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 417

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 418 AEERAKALIKSKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 476

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 477 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 527

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 528 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQENVKQSRLKLAALTAKT 581

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+E+   M
Sbjct: 582 IKQGLALLGIETLERM 597


>gi|262167694|ref|ZP_06035397.1| arginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262023899|gb|EEY42597.1| arginyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 592

 Score =  412 bits (1058), Expect = e-112,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 17  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 70

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 71  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADARLGVAQEAPKN- 129

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 130 -IVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 189 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 240 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 295

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 296 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 355 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 412

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 413 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 471

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 472 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 522

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 523 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 576

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 577 IKQGLALLGIDTLERM 592


>gi|261377586|ref|ZP_05982159.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146334|gb|EEZ72752.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 572

 Score =  412 bits (1058), Expect = e-112,   Method: Composition-based stats.
 Identities = 119/590 (20%), Positives = 236/590 (40%), Gaps = 78/590 (13%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  IVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHAALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFIGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPL 324
                ++ ++D+L ++G   E                D  +++F        G+     +
Sbjct: 262 ---DDLQPVVDDLVQKGLAVED---------------DGAKVVFLEEFKNKEGEPAAFIV 303

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            K  G + Y + DLA  + +  R   D ++YV+    + + ++L   +   S        
Sbjct: 304 QKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKASYLPEDAKA 363

Query: 384 -LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
             +     + +DG P K   R+GD + L  ++ E                          
Sbjct: 364 EFIGFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAEKIGK 421

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +    +
Sbjct: 422 TVGIGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDTTV 480

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                           +  E QL   L ++  V+++      P+ LA YLY +A++F   
Sbjct: 481 P-----------TVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRF 529

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           +  +       RLQL       +  GL ++G++  + M
Sbjct: 530 YEAC-------PILKSEGATRNSRLQLAKLTGDTLKQGLELLGIDVLDVM 572


>gi|262166185|ref|ZP_06033922.1| arginyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025901|gb|EEY44569.1| arginyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 597

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 22  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 75

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 76  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADERLGVAQEAPK-- 133

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 134 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 193

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+       +L +               + K   E   F E     +VK       
Sbjct: 194 -ERVQKESGEISMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 244

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 245 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPLIVSDLKAKGLAV 300

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 301 ED-DGAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 359

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +         Q+++      + L +DG P K   RAG  + L  ++DE
Sbjct: 360 SRQHQHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 417

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 418 AEERAKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 476

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 477 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 527

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 528 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESVKQSRLKLAALTAKT 581

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+E+   M
Sbjct: 582 IKQGLALLGIETLERM 597


>gi|153826066|ref|ZP_01978733.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740183|gb|EDM54336.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 599

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADTRLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|261392246|emb|CAX49766.1| arginyl-tRNA synthetase (arginine--tRNA ligase; ArgRS) [Neisseria
           meningitidis 8013]
          Length = 572

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 116/587 (19%), Positives = 235/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIHAALND-ARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGSIKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAP-- 481

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 482 ---------TVLTEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A +      RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAESAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|226946552|ref|YP_002801625.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511638|sp|C1DHR7|SYR_AZOVD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226721479|gb|ACO80650.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 579

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 130/599 (21%), Positives = 235/599 (39%), Gaps = 70/599 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +     +   +   I +E  +D +HG  ++N AM+L++P GL P  +AE
Sbjct: 5   IRQLIQQALTRLTDDGVLPAGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGLKPRQLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +  D  V  V IAG GF+N + +   L + L  + ++    G    G   +V ++
Sbjct: 65  KLVAALPADASVSKVEIAGPGFLNFFQNSDALARRL-EVALADERLGVRKHGDLQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L   +  +  
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDVVIRQNHVGDWGTQFGMLLAHLEEK-P 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            +  +  +DL + Y          +  AD+    ++     E + L + + ++  + +  
Sbjct: 183 ASAESELADLEQFYRAAKKRFDESEAFADRARELVVRLQAGEPECLRLWQRFNAIS-LSH 241

Query: 245 IRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            ++  + L ++   D    E  ++   P     I+  L  +G + E       S+  Q  
Sbjct: 242 CQEVYERLGVRLTPDDIRGESAYNDELPG----IVQALRDKGLLTE-------SEGAQCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            +D     FR    G+ +   + K+ G Y Y   DLA  + + +    D ++Y +    +
Sbjct: 291 FLDE----FR-NAEGNPLPVIVQKAGGGYLYATTDLASMRYRSQVLKADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +   AVA      +    +       +   DG P K   R G  + L  ++DE    
Sbjct: 346 LHFQMTFAVARRAGFVRDDTALEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEQR 403

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    F+F  +    + N   Y
Sbjct: 404 AYALVKGKNPELPEEELRHIARAVGIGAVKYADLSKHRTSDYSFNFELMLSF-EGNTAPY 462

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R  S+FR+      ++D    P             EL L   LA++  V+ N  
Sbjct: 463 LLYAYTRVASVFRKLGREIDEIDGSPAPEAG---------QELALAARLAQFGEVLGNVA 513

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               P+ L  YLYDLA +F   + +         + A+       RL L       +  
Sbjct: 514 EKGLPHLLCAYLYDLAGLFSSFYENC------PILTADTPARQQSRLLLAALTGRTLRQ 566


>gi|306826025|ref|ZP_07459361.1| arginine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431741|gb|EFM34721.1| arginine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 563

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 136/616 (22%), Positives = 247/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  ++L  ++     Y    IGK
Sbjct: 53  PQMIAADIAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQDVITEKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAEKDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D LA +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDILAEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVSLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F  +     S  D    ++I  L ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPDTAGNYSLNDAESWEIIKLLQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 SRAADNFEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|73953492|ref|XP_866928.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 3 [Canis
           familiaris]
          Length = 662

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 129/620 (20%), Positives = 257/620 (41%), Gaps = 72/620 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFG-CAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECVERVEIAGPGFINVHLRKDFVSQQLTNLLVNGVQLP--ALGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    DI + E    F++     + D++     +             
Sbjct: 309 KLICDVSRQEFNKIYDALDISLIERGESFYQ---DRMNDVVKEFEDK------------- 352

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
           +       D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 353 EPRFVQVDDGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYV 409

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  S + + +   A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 410 VDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLE 469

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 470 EGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-D 528

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     +++ ++  +     +   D   E +L   +  +
Sbjct: 529 RGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQETKIVLDHEKEWKLGRCILRF 583

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 584 PEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGQVLKVNMWRMLLCEA 642

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+I+    +I+G++    M
Sbjct: 643 VAAIMAKAFDILGIKPVQRM 662


>gi|254286807|ref|ZP_04961760.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150423098|gb|EDN15046.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 599

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADVRLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|293364384|ref|ZP_06611110.1| arginine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702651|ref|ZP_07639603.1| arginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317230|gb|EFE57657.1| arginine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623767|gb|EFO02752.1| arginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 563

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 135/616 (21%), Positives = 247/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  ++L  ++     Y    IGK
Sbjct: 53  PQMIAADIAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQDVITEKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENIVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAEKDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D LA +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDILAEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F  +     S  D    ++I  L ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPDAAGNYSLNDAESWEIIKLLQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|325132648|gb|EGC55334.1| arginyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138564|gb|EGC61127.1| arginyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 572

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 116/587 (19%), Positives = 236/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++AF G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKARFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQAVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + ++     D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRFGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYLPENVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKASEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL ++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLELLGIDVLDVM 572


>gi|291044019|ref|ZP_06569735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291012482|gb|EFE04471.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 581

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 118/623 (18%), Positives = 242/623 (38%), Gaps = 80/623 (12%)

Query: 1   MYL-----FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55
           M L     F +    +++   E              +V++  ++  HG    N  M  ++
Sbjct: 1   MNLTERPNFMNLHQTVEH---EAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVMGAAK 57

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               +P  +A+ +   +  +  ++S  +AG GFINL L   +L + + + +     +G  
Sbjct: 58  KAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRHEFLAQNIHAALND-ARFGVA 116

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +   V I++ S N    MHVGH R +++GD+++ ++ F+G  V R+ ++ D G Q  
Sbjct: 117 KTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFTGNTVIRQNHVGDWGTQFG 176

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIV 233
            L   +  + +       +DL + Y             AD     ++     +E  L + 
Sbjct: 177 MLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALW 236

Query: 234 KDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K +   ++   + + D L  L ++ +    E  ++      ++ ++D+L  +G   E   
Sbjct: 237 KQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVEKGLAVE--- 288

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
                   +   +D  +        G+     + K  G + Y + DLA  + +  R    
Sbjct: 289 ----DDGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKAG 339

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++YV+    + + ++L   +              +     + +DG P K   R+GD + 
Sbjct: 340 RLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKPFK--TRSGDTVK 397

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  ++ E                           VG  +V++  L +  +    FD+  +
Sbjct: 398 LVDLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+QYAY R +S+FR+A +            +        +  E QL   L
Sbjct: 458 LSF-EGNTAPYLQYAYTRVQSVFRKAGEW-----------DATAPTVLTEPLEKQLAAEL 505

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++  V+++      P+ LA YLY  A++F   +           ++A        RLQL
Sbjct: 506 LKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEAC------PILKAEGAS-RNSRLQL 558

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
                + +  GL+++G++  + M
Sbjct: 559 AKLTGNTLKQGLDLLGIDVLDVM 581


>gi|331267177|ref|YP_004326807.1| arginyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683849|emb|CBZ01467.1| arginyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 563

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 138/616 (22%), Positives = 247/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  ++L  ++     Y    IGK
Sbjct: 53  PQMIAADIAEKIN-SQAFEKVVAIGP-YVNFFLDKSAISAQVLQDVITEKDHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAEKDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  I+D LA +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAIVDILAEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F  N     S  D    ++I  L ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPNTAGNYSLNDAESWEIIKLLQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|116074027|ref|ZP_01471289.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069332|gb|EAU75084.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 595

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 136/630 (21%), Positives = 237/630 (37%), Gaps = 93/630 (14%)

Query: 7   FSSRLKNYLKEIDCKI-KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             ++L+  L+    +  +  +       +        G    N A+ L++PL   P  IA
Sbjct: 8   LETQLRGALQRAFPEAWEATEGAGLDPQLAPASKPEFGDFQANGALPLAKPLKQAPRQIA 67

Query: 66  ELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IV +++ DP          IAG GFINL + P  L   ++S +      G   +    
Sbjct: 68  TAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPEQLAAEVASRLGD-PRLGVPAVENAA 126

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   +
Sbjct: 127 PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHL 186

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                +AL   D+              +G +L   Y      F +++         V  +
Sbjct: 187 KQVAPEALQTADA------------VDLG-DLVAFYREAKKRFDDDEAFQSTSRDEVVKL 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQ 300
                  LKA  +  D         R +   I D +D  L+ +G  +     P      +
Sbjct: 234 QGGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLK 286

Query: 301 KCDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-----ERG 348
             ++    D  Q +F   + G D   +   + KSDG + Y   DLA  + ++       G
Sbjct: 287 DAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDG 346

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGD 406
              ++YV  +  + +   +  VA          ++  +   LV+   DG   K+  RAGD
Sbjct: 347 AKRVVYVTDAGQANHFAGVFQVAERAGWIPEGSRLEHVPFGLVQ-GEDGK--KLKTRAGD 403

Query: 407 FITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELL 435
            + LR ++DE                               VG  +V++  L +      
Sbjct: 404 TVRLRDLLDEAVERAEADLRSRLSEEERSESKEFIGHVATTVGLAAVKYADLSQNRITNY 463

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F F ++    + N   Y+ YA  R   I R+  D+            +  Q    +  E
Sbjct: 464 QFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLEV----------LGAQLQFSEPQE 512

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A+   L
Sbjct: 513 WALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKADPEAL 566

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L    A  + +GL ++G+ +   M
Sbjct: 567 -PSRLALCRLTADTLKAGLGLLGIATLERM 595


>gi|228476699|ref|ZP_04061368.1| arginyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251648|gb|EEK10745.1| arginyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 563

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 131/609 (21%), Positives = 247/609 (40%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + ++  +++ E     + ++E P++   G ++   A  L++ L   P  IA  
Sbjct: 4   KELIAAEIAKVVPELEQEN---IQNLLETPKNADMGDVAFP-AFSLAKVLRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I    + + V   G  +IN +L  S +   +L  ++  G  Y    IG G  +  +
Sbjct: 60  IAEKIDAS-NFEKVEAVGP-YINFFLDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFD 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+ D LA+++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGS 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+  N  +     Y  +  +       D+ + E    L   +E+   + + +  ++++
Sbjct: 178 EEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLV 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R     L +  D +  E  ++      + +++D L  +G + E              
Sbjct: 238 EFNRL-YDELGVSFDSYNGEAFYN----DKMDEVVDILTEKGLLQES------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ S
Sbjct: 280 ---QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQS 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------- 408
            + K+L+AV   +    +  ++       + ++G   K+S R G+ I             
Sbjct: 337 AHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRA 393

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                           V   VG  +++F  L        DFD   +     E    YVQY
Sbjct: 394 QAQIEAKNPNLPNKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGE-TGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR +SI R+A           F  +     S  D    ++I  + ++PR+I  A+   
Sbjct: 453 AHARIQSILRKAN----------FTPSADATYSLNDVESWEIIKLIQDFPRIINRASDNF 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L +
Sbjct: 503 EPSIVAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALCYATATVLKEALRL 554

Query: 577 IGVESPNEM 585
           +GVE+P+EM
Sbjct: 555 LGVEAPDEM 563


>gi|313665274|ref|YP_004047145.1| arginine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949800|gb|ADR24396.1| arginine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 554

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 175/581 (30%), Positives = 296/581 (50%), Gaps = 45/581 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           + LK I  K  + K+     +IE  ++   G LS++  +I S+ +   PL +A     ++
Sbjct: 11  DDLKNICQKFNISKE----PIIEINKNNTPGLLSSSICLISSKQVNKKPLDLANDFKEQL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +  +  S+ IA  GF+N+ + P  L  ++++++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNNYSSIQIASPGFLNVLVKPEILSSVINNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY+V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYKVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAMMKII 245
           D+  PE  Y G     + K + +KY+ +  +         ++    + K  S+   +KII
Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNDQFKDINYTDNKILDDYVHSLFKQISIDYFLKII 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++     +   Y                  
Sbjct: 245 KQQLADFNVKIRHWSSEQEVY--DTHQIEKVLKLYKSKDATYY----------------K 286

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
              +  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 287 DGAVFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHHLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL ++G   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKNGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QAK              V
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTK-------KITPLV 459

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E +L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++       
Sbjct: 460 KETNLLNNPKETELLLVLDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------E 513

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +  NN +LT +RL  + AV  ++ +   IIG+E   EM
Sbjct: 514 IKIIDENNLQLTKLRLGFIKAVLQVLKNAFFIIGIEPVIEM 554


>gi|322375078|ref|ZP_08049592.1| arginine--tRNA ligase [Streptococcus sp. C300]
 gi|321280578|gb|EFX57617.1| arginine--tRNA ligase [Streptococcus sp. C300]
          Length = 563

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 135/616 (21%), Positives = 247/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  ++L  ++     Y    IGK
Sbjct: 53  PQMIATDIAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQDVITEKDHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAEKDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D LA +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDILAEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F  +     S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPDTASNYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAIGLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|241760366|ref|ZP_04758461.1| arginine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319244|gb|EER55722.1| arginine--tRNA ligase [Neisseria flavescens SK114]
          Length = 572

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 118/618 (19%), Positives = 238/618 (38%), Gaps = 79/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+           +E              +V++  ++   G    N  M  ++    +
Sbjct: 1   MNLYQTVE-------REAQAAFAAAGLSDSPVVLQAAKNPDFGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +     +G     + 
Sbjct: 54  PRELAQKVAEALADNAVIESAEVAGPGFINLRLRPDFLAQNIQTALND-ARFGIAKTAQP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ ++ F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + D L  L ++ +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESKYN----DDLQPVVDDLVQKGLAVE-------D 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D  +        G+     + K  G + Y + DLA  + +  R   D ++YV
Sbjct: 281 DGAKVVFLDEFK-----NKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +    + + ++L   +              +     + +DG P K   R+GD + L  ++
Sbjct: 336 VDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKPFK--TRSGDTVKLVDLL 393

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            E                           VG  +V++  L +  +    FD+  +    +
Sbjct: 394 TEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLSF-E 452

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R +S+FR+A +   +                 +  E QL   L ++  
Sbjct: 453 GNTAPYLQYAYTRVQSVFRKAGEWDTN-----------EPTVLTEPLEKQLAAELLKFED 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+++      P+ LA YLY +A++F   +           +  +       RLQL     
Sbjct: 502 VLQSVADTAYPHYLAAYLYQIATLFSRFYEAC-------PILKSEGATRNSRLQLAKLTG 554

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GL ++G++  N M
Sbjct: 555 DTLKQGLGLLGIDVLNVM 572


>gi|261210003|ref|ZP_05924302.1| arginyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840949|gb|EEX67486.1| arginyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 592

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 233/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 17  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 70

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + ++       IAG GFIN++LS  +L     + +            K  
Sbjct: 71  REFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQAEAALADERLGVAPEAPK-- 128

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G+ V R  +I D G Q   L  ++
Sbjct: 129 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK     A 
Sbjct: 189 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDAF 239

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 240 CLDMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPLIVSDLKAKGLAV 295

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 296 ED-DGAQVVFLDEFKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +         ++++      + L +DG P K   RAG  + L  ++DE
Sbjct: 355 SRQHQHLMQAWTIVRKAGYIPEEVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 412

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 413 AEDRAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 471

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 472 TAPYMQYAYTRVASVFAKAG-----VDMNELAGHIQITE----EKEKALIAKLLQFEEAV 522

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 523 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESVKQSRLKLAALTAKT 576

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 577 IKQGLALLGIDTLERM 592


>gi|153828893|ref|ZP_01981560.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148875599|gb|EDL73734.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 599

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 122/616 (19%), Positives = 232/616 (37%), Gaps = 72/616 (11%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + A  + R+   ++                ++ +      G    N  M  ++ LG +P
Sbjct: 24  NIQALINDRVSQAIEAAGAPAGTPA------LVRQSAKAQFGDYQANGIMGAAKQLGTNP 77

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
              A+ ++  + +D       IAG GFIN++LS  +L     + +            K  
Sbjct: 78  REFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQAEAALADIRLGVAQEAPK-- 135

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  ++ + N    MHVGH R  ++GD +   + F G++V R  +I D G Q   L  ++
Sbjct: 136 TIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANL 195

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R Q+A      +L +               + K   E   F E     +VK       
Sbjct: 196 -ERVQKASGEVSMELSD--------LEAFYRESKKLYDEDEQFAETARNYVVKLQGGDPF 246

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +   L  + +  +      ++ R + S  R+ +   +    +   I+   K+K    
Sbjct: 247 CLEMWKKLVDVTMIQNQ----RNYDRLNVSLTRENVMGESMYNDMLPQIVSDLKAKGLAV 302

Query: 302 CDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            D D  Q++F        G+ +   + K DG + Y   D+A  K +YE  G D ++Y + 
Sbjct: 303 ED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFID 361

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S    ++ +   +          +++      + L +DG P K   RAG  + L  ++DE
Sbjct: 362 SRQHQHLMQAWIIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   +V++  L +  +    FD+  +    + N
Sbjct: 420 AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGN 478

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R  S+F +A      +D +    ++   E      E  LI  L ++   +
Sbjct: 479 TAPYMQYAYTRVASVFAKAG-----VDMNELTGHIQITE----EKEKALIAKLLQFEEAV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           ++     +P+ +  YL++LA +F   +           + A    +   RL+L    A  
Sbjct: 530 QSVAREGQPHIMCSYLFELAGIFSSFYEAC------PILVAEQESIKQSRLKLAALTAKT 583

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++   M
Sbjct: 584 IKQGLALLGIDTLERM 599


>gi|313836272|gb|EFS73986.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928737|gb|EFS92568.1| arginyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971227|gb|EFT15325.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328906514|gb|EGG26289.1| arginine--tRNA ligase [Propionibacterium sp. P08]
          Length = 556

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 129/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E        +        GH  +N A+ L++     P  +A  IVA++ ++   ++
Sbjct: 9   AARIESVTGIDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDVEDLCET 68

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S ++      G   + +  +V I++ + N    MHVGH
Sbjct: 69  PDIAGPGFINLRLRSDVLARVASDLITD-PNIGITQVEEPQRVVIDYSAPNVAKQMHVGH 127

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + ++ D G Q   L   +          +   + + Y
Sbjct: 128 LRSTIIGDCFNRVLSAQGHTVIPQNHLGDWGTQFGMLVEYIVENRMDLSEFDLPGVEQLY 187

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      E AD+    ++     +E+ L I +   +   ++        L++    
Sbjct: 188 KDAKKTFDADPEFADRARRRVVKLQGGDEETLRIWRTL-IDVSLEGFNAVYARLSVLLTD 246

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 247 DDVAGESTYN----DDLPRVVDELEADGLAVE----------------DNGALCV--FVE 284

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 285 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 344

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 345 FLPDDVETQHVGYGMVLGPDGRPFK--TREGGTVSLWSLLDEAETHAAPNIALAAIKYAD 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      D+ P+ D D   
Sbjct: 403 LSTGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPDVDPEADLDAMV 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+++  V+E       P+KL  YLY+LA  +   +     
Sbjct: 462 WGRISVLDE--PAEQQLALLLSQFGEVVELVAQDLTPHKLCTYLYELAGAYSVFYEQC-- 517

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 518 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|309378705|emb|CBX22655.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 572

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 121/621 (19%), Positives = 240/621 (38%), Gaps = 85/621 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L            +E              +V++  ++  HG    N  M  ++    +
Sbjct: 1   MNLHQTVE-------REAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +     +G     K 
Sbjct: 54  PRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLARNIQTALND-ARFGVAKTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ ++AF G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLAFMGNTVVRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++   + + + L  L +  +    E  ++      ++ ++D+L ++G   E        
Sbjct: 233 ISLSHAQAVYNTL-GLKLHPEDVAGESKYN----DDLQAVVDDLVQKGLAVED------- 280

Query: 297 KTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
                   D  +++F        G+     + K  G + Y + DLA  + +  R   D +
Sbjct: 281 --------DGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKADRL 332

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +YV+    + + ++L   +              +     + +DG P K   R+GD + L 
Sbjct: 333 LYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFIGFGTMMGKDGKPFK--TRSGDTVKLV 390

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            ++ E                           VG  +V++  L +  +    FD+  +  
Sbjct: 391 DLLTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS 450

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+QYAY R +S+FR+A              +        +  E QL   L +
Sbjct: 451 F-EGNTAPYLQYAYTRVQSVFRKAG-----------KWDATAPTVLTEPLEKQLAAELLK 498

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V+++      P+ LA YLY +A++F   +           ++A        RLQL  
Sbjct: 499 FENVLQSVADTAYPHYLAAYLYQIATLFSRFYEAC------PILKAEG-ATRNSRLQLAK 551

Query: 565 AVASIINSGLNIIGVESPNEM 585
                +  GL+++G++  + M
Sbjct: 552 LTGDTLKQGLDLLGIDVLDVM 572


>gi|312277462|gb|ADQ62119.1| Arginyl-tRNA synthetase, putative [Streptococcus thermophilus ND03]
          Length = 563

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 132/609 (21%), Positives = 248/609 (40%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + ++  +++ E     + ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 4   KELIAAEIAKVVPELEQEN---IQNLLETPKNADMGDLAFP-AFSLAKVLRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I    + + V   G  +IN++L  S +   +L  ++  G  Y    IG G  +  +
Sbjct: 60  IAEKIDAS-NFEKVEAVGP-YINIFLDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFD 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+ D LA+++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGS 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+  N  +     Y  +  +       D+ + E    L   +E+   + + +  ++++
Sbjct: 178 EEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLV 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R     L +  D +  E  ++      + +++D L  +G + E              
Sbjct: 238 EFNRL-YDELGVSFDSYNGEAFYN----DKMDEVVDILTEKGLLQES------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ S
Sbjct: 280 ---QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQS 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------- 408
            + K+L+AV   +    +  ++       + ++G   K+S R G+ I             
Sbjct: 337 AHFKQLKAVLKEMGYNWSD-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRA 393

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                           +   VG  +++F  L        DFD   +     E    YVQY
Sbjct: 394 QAQIEAKNPNLPNKEAIAHAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGE-TGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR +SI R+A           F  +     S  D    ++I  L ++PR+I  A+   
Sbjct: 453 AHARIQSILRKAD----------FTPSADATYSLNDVESWEIIKLLQDFPRIINRASDNF 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L +
Sbjct: 503 EPSIVAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALCYATATVLKEALRL 554

Query: 577 IGVESPNEM 585
           +GVE+P+EM
Sbjct: 555 LGVEAPDEM 563


>gi|54019981|ref|YP_115527.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81378818|sp|Q602D8|SYR_MYCH2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|53987154|gb|AAV27355.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 534

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 172/582 (29%), Positives = 306/582 (52%), Gaps = 57/582 (9%)

Query: 11  LKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +K  + +   K    + ++    +++IE+ ++   G  S+N A+I ++   +D L +A+ 
Sbjct: 1   MKKKISQAIIKFFKNENLIIDESKLIIEKSKN--FGDYSSNVALIFAKQNKIDSLKLAQT 58

Query: 68  IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  ++   + +++ + IA  GFIN ++S +    I+S I+  G  +GR  + K  K+N+E
Sbjct: 59  IKNQLLSENLNLEKIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLE 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTG +H+GH R AV+GD LA+++ FSG  V REYYIND G+QI+ L  SVF RYQ
Sbjct: 117 FVSANPTGFLHLGHLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVGSVFSRYQ 176

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKI 244
           Q        LPE  Y G  +    ++    Y+++  N    + +   I ++ S++  +  
Sbjct: 177 QIFKK--FPLPEEAYLGEDIIWCAQKFFQIYANKFENSSLDDLEAYKIFREKSIEIFLDE 234

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+ DL  L+I+ D+F SE +  R        +  NLA   +VY+                
Sbjct: 235 IKADLANLSIKFDVFSSESELFR-----TEKVQKNLANLPFVYK---------------- 273

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362
             + +  +++  GD  DR L+K +G +TYF++D+AY   K    F  D +I + G+DH G
Sbjct: 274 KEEAIWLKTSKFGDQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIG 333

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV R++A    V+  + ++++LL +LV+L+++G   KMSKR G   T++ +++ V  D++
Sbjct: 334 YVDRMKAALKTVNLNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAI 392

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +  R  + L++FD     + S +NP+F +QYA+AR   +   +          + P 
Sbjct: 393 RYFISERSYNSLVEFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIAPE 443

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             +  E+E    E  LI  L ++  ++   T   +   L  YL +LA++F+  +S+    
Sbjct: 444 KKLKFEAEN---ETILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNS--- 497

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + +   N       L L  AV  ++ +GL ++G+++   
Sbjct: 498 ---KIIGNQN---QNSLLSLTKAVQIVLKNGLKLLGIKAKER 533


>gi|307710942|ref|ZP_07647367.1| arginyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617243|gb|EFN96418.1| arginyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 563

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 137/619 (22%), Positives = 247/619 (39%), Gaps = 90/619 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILN-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  +I      + V   G  ++N +L  S +  ++L +++     Y    IGK
Sbjct: 53  PQMIATELAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVITQKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DY 236
           +   W  ++A+       P      +Y++      A+  +   L+    +W   ++  D 
Sbjct: 171 AYKKWGDEEAVK----AHPIDELLKLYVR----INAEAENDPSLDDEAREWFRKLENGDE 222

Query: 237 SVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
              A+ +  RD+ L   N  ++    E D + G+      +  ++D L+ +G + E    
Sbjct: 223 EALALWQWFRDESLVEFNRLYNELKVEFDSYNGEAFYNDKMDAVVDILSEKGLLVES--- 279

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                            +      G +    + KSDG+  Y   DLA    +  E  F  
Sbjct: 280 -------------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAK 326

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IYV+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I   
Sbjct: 327 SIYVVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLE 383

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     V   VG  +++F  L    +   DFD   +    
Sbjct: 384 PTVAEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFE 443

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    YVQYAYAR +SI R+A           F        S  DT   ++I  + ++P
Sbjct: 444 GE-TGPYVQYAYARIQSILRKAD----------FKPETASNYSLNDTESWEIIKLIQDFP 492

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           R+I  A    EP  +A +   LA  F+ +++H R       +   N +    RL L +A 
Sbjct: 493 RIINRAADNFEPSIIAKFAISLAQAFNKYYAHTR-------ILDENPE-RDSRLALSYAT 544

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GVE+P +M
Sbjct: 545 AVVLKEALRLLGVEAPEKM 563


>gi|307705749|ref|ZP_07642594.1| arginyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620667|gb|EFN99758.1| arginyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 563

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 137/617 (22%), Positives = 245/617 (39%), Gaps = 86/617 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILN-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  +I      + V   G  ++N +L  S +  ++L +++     Y    IGK
Sbjct: 53  PQMIAAELAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVITEKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L +  D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVDFDSYNGEAFYN----DKMDAVVDILSEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFI----- 408
           V+G + S + K+L+AV   +       I  + C LV         K+S R G+ I     
Sbjct: 330 VVGQEQSAHFKQLKAVLKEMGYDWSDDITHVPCGLVT----KEGKKLSTRKGNVILLEPT 385

Query: 409 --------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                  HV   VG  +++F  L    +   DFD   +     E
Sbjct: 386 VAEAVSRAKAQIEDKNPELENKDHVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+
Sbjct: 446 -TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDAESWEIIKLIQDFPRI 494

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A    EP  +A +   LA  F+ +++H R       +   N +    RL L +A A 
Sbjct: 495 INRAADNFEPSIIAKFAISLAQAFNKYYAHTR-------ILDENPE-RDSRLALSYATAV 546

Query: 569 IINSGLNIIGVESPNEM 585
           ++   L ++GVE+P +M
Sbjct: 547 VLKEALRLLGVEAPEKM 563


>gi|72080354|ref|YP_287412.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|109895005|sp|Q4A900|SYR_MYCH7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71913478|gb|AAZ53389.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 534

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 171/582 (29%), Positives = 307/582 (52%), Gaps = 57/582 (9%)

Query: 11  LKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +K  + +   K    + ++    +++IE+ ++   G  S+N A++ ++   +D L +A+ 
Sbjct: 1   MKKKISQAIIKFFKNENLIIDESKLIIEKSKN--FGDYSSNVALMFAKQNKIDSLKLAQT 58

Query: 68  IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  ++   + +++ + IA  GFIN ++S +    I+S I+  G  +GR  + K  K+N+E
Sbjct: 59  IKNQLLSENLNLEKIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLE 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTG +H+GH R AV+GD LA+++ FSG  V REYYIND G+QI+ L  SVF RYQ
Sbjct: 117 FVSANPTGFLHLGHLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVSSVFSRYQ 176

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKI 244
           Q        LPE  Y G  +    ++    Y+++  N    + +   I ++ S++  +  
Sbjct: 177 QIFKK--FALPEEAYLGEDIIWCAQKFFQIYANKFENSSLDDLETYKIFREKSIEIFLDE 234

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+ DL  L+I+ D+F SE +  R        +  NLA   +VY+                
Sbjct: 235 IKADLANLSIKFDVFSSESELFR-----TEKVQKNLANLPFVYK---------------- 273

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362
             + +  +++  GD  DR L+K +G +TYF++D+AY   K    F  D +I + G+DH G
Sbjct: 274 KEEAIWLKTSKFGDQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIG 333

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV R++A    V+  + ++++LL +LV+L+++G   KMSKR G   T++ +++ V  D++
Sbjct: 334 YVDRMKAALKTVNLNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAI 392

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +  R  + L++FD     + S +NP+F +QYA+AR   +   +          + P 
Sbjct: 393 RYFISERSYNSLVEFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIVPE 443

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            ++  E+E    E  LI  L ++  ++   T   +   L  YL +LA++F+  +S+    
Sbjct: 444 KILKFEAEN---ETILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNS--- 497

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + +   N       L L  AV  ++ +GL ++G+++   
Sbjct: 498 ---KIIGNQN---QNSLLSLTKAVQIVLKNGLKLLGIKAKER 533


>gi|309799197|ref|ZP_07693447.1| arginyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117214|gb|EFO54640.1| arginyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 563

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 133/616 (21%), Positives = 248/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E+P++   G ++   A  L++     
Sbjct: 1   MNTKQLIASELASVIDSLDQEAILN-------LLEQPKNSDMGDIAF-PAFTLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  + +  ++L +++     Y    IGK
Sbjct: 53  PQMIAADIAEKIN-SQAFEKVVATGP-YVNFFLDKNAISAQVLQAVITEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAISRAKAQIEAKNSELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAANYSLNDPESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|260891320|ref|ZP_05902583.1| arginine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858996|gb|EEX73496.1| arginine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 574

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 135/611 (22%), Positives = 253/611 (41%), Gaps = 78/611 (12%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +LK    E    I       +++ I+       G   TN AM+ S+ +G +P  IA  +V
Sbjct: 7   KLKKLFSENINNI-FGADYAEKVDIQNSTKKEFGDFQTNFAMVSSKLIGKNPREIASTLV 65

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
              K +  ++ + IAG GFIN+YL  S+L + +    V   +Y  + +     V I++ S
Sbjct: 66  DNFKENDIIEKLEIAGPGFINIYLKNSFLNEEIKK--VENEKYDFSFLNTDKTVIIDYSS 123

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N    MH+GH R  ++GD++  ++ F G+    + +I D G Q   L ++      +  
Sbjct: 124 PNIAKRMHIGHLRSTIIGDSIKRILQFLGFHTLADNHIGDWGTQFGKLIVAYKNWLNKKA 183

Query: 190 YNNDSDLPEGYYPGVYLKHVG-----KELADKYSSEL--LNFPEEKWLPIVKDYSVQAMM 242
           Y  D   P G    +Y++          L D+   EL  L   +E    + K++ +   +
Sbjct: 184 YEED---PIGELERIYVQFSDEAKKNPALEDEAREELKKLQLGDEDNQKLWKEF-IDISL 239

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K        L++  D +  E  ++   PS    +++ L  +G   E              
Sbjct: 240 KEYNKIYDRLDVNFDYYYGESFYNDMMPS----VLEELKEKGIARED------------- 282

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHS 361
                 ++F            + K DGS+ Y  +DLA  K  K E   D  +Y+      
Sbjct: 283 --QGALVVFFENDKLPPA--IVQKKDGSFLYTTSDLATMKFRKDELNVDEAVYLTDDRQQ 338

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + K++  +   + E        +   +  + DGM    S R+G+ I L  ++DE     
Sbjct: 339 NHFKQVFEIGEMLGEPYNYKKTHVVFGIMRFGDGMI--FSSRSGNIIRLVDLLDEAKTQV 396

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VGS ++++  L +  +  + F + KV    + N   Y+
Sbjct: 397 KKVIDEKNPNIPEDEKENISEIVGSGAIKYFDLSQNRTSDITFTWDKVLSF-EGNTGPYL 455

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY Y R  SIFR+ K+   D++ +    +      +    E +L   L  +P+ +  +  
Sbjct: 456 QYTYVRIMSIFRKLKEENIDVENENIILD------DMTGIERELAAELLRFPQAVVKSYE 509

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           +  P  +A YL+D+A +F+  ++          ++  N+K+   R+ LV   A ++  GL
Sbjct: 510 SYRPNIIADYLFDMAKLFNNFYNSS------SILKEENKKVMDARILLVKKTAFVLKEGL 563

Query: 575 NIIGVESPNEM 585
           +++G+++ + M
Sbjct: 564 SLLGIKTVDRM 574


>gi|314924377|gb|EFS88208.1| arginyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 582

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 129/582 (22%), Positives = 235/582 (40%), Gaps = 51/582 (8%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S  V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRADVLARVASDFVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYSRLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLD--FDLFPRN 483
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+ A +  P++D   DL   +
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   + +E QL + L+ +  ++E       P+KL  YLY+LA  +   +      P
Sbjct: 488 WGRISVLDEPAEQQLALLLSRFGEIVEVVATDLAPHKLCTYLYELAGAYSVFYEQC---P 544

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 545 VLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|71893371|ref|YP_278817.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|109895006|sp|Q4AAT7|SYR_MYCHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71851498|gb|AAZ44106.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|312600985|gb|ADQ90240.1| Arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 534

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 172/582 (29%), Positives = 307/582 (52%), Gaps = 57/582 (9%)

Query: 11  LKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +K  + +   K    + ++    +++IE+ ++   G  S+N A+I ++   +D L +A+ 
Sbjct: 1   MKKKISQAIIKFFKNENLIIDESKLIIEKSKN--FGDYSSNVALIFAKQNKIDSLKLAQT 58

Query: 68  IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  ++   + +++ + IA  GFIN ++S +    I+S I+  G  +GR  + K  K+N+E
Sbjct: 59  IKNQLLSENLNLEKIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLE 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           FVSANPTG +H+GH R AV+GD LA+++ FSG  V REYYIND G+QI+ L  SVF RYQ
Sbjct: 117 FVSANPTGFLHLGHLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVGSVFSRYQ 176

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKI 244
           Q        LPE  Y G  +    ++    Y+++  N    + +   I ++ S++  +  
Sbjct: 177 QIFKK--FALPEEAYLGEDIIWCAQKFFQIYANKFENSSLDDLETYKIFREKSIEIFLDE 234

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I+ DL  L+I+ D+F SE +  R        +  NLA   +VY+                
Sbjct: 235 IKADLANLSIKFDVFSSESELFR-----TEKVQKNLANLPFVYK---------------- 273

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362
             + +  +++  GD  DR L+K +G +TYF++D+AY   K    F  D +I + G+DH G
Sbjct: 274 KEEAIWLKTSKFGDQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIG 333

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV R++A    V+  + ++++LL +LV+L+++G   KMSKR G   T++ +++ V  D++
Sbjct: 334 YVDRMKAALKTVNLNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAI 392

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R+ +  R  + L++FD     + S +NP+F +QYA+AR   +   +          + P 
Sbjct: 393 RYFISERSYNSLVEFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIVPE 443

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            ++  E+E    E  LI  L ++  ++   T   +   L  YL +LA++F+  +S+    
Sbjct: 444 KILKFEAEN---ETILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNS--- 497

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + +   N       L L  AV  ++ +GL ++G+++   
Sbjct: 498 ---KIIGNQN---QNSLLSLTKAVQIVLKNGLKLLGIKAKER 533


>gi|288906386|ref|YP_003431608.1| arginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832433|ref|ZP_07465586.1| arginine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979400|ref|YP_004289116.1| Arginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733112|emb|CBI14693.1| arginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425473|gb|EFM28592.1| arginine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179328|emb|CBZ49372.1| Arginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 563

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 133/610 (21%), Positives = 257/610 (42%), Gaps = 84/610 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R++N + E+D +  +        ++E P++   G L+   A  L++ L   P  IA 
Sbjct: 7   IAERIQNIVPELDQEQIIN-------LLEIPKNSDMGDLAF-PAFSLAKILRKAPQMIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNI 125
            +  ++      + +   G  +IN +L    +   +L  ++ +G +Y    +G+G  V I
Sbjct: 59  DVAEKMDATG-FEKIEAVGP-YINFFLDKKSISADVLGQVIANGSDYASQDLGEGRNVAI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAM 241
            ++A+  +  D     Y  +  +   +   D+ + E    L   +E+ + + + +  +++
Sbjct: 177 DEEAVKAHPIDELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQWFRDESL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  R     L +  D F  E  ++      + +++D L  +G + E             
Sbjct: 237 VEFNRL-YDELGVSFDSFNGEAFYN----DKMDEVVDILTEKGLLEES------------ 279

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
               +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ 
Sbjct: 280 ----QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           S + K+L+AV   +  +  + ++       + ++G   K+S R G+ I            
Sbjct: 336 SAHFKQLKAVLNEMGFEWNE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVKR 392

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V   VG  +++F  L        DFD   +     E    YVQ
Sbjct: 393 AEDQINAKNPNLADKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR +SI R+A+          F  +V    S  D    +++  + ++PR+I+ A   
Sbjct: 452 YAHARIQSILRKAE----------FTPSVNQVYSLDDAESWEIVKLIQDFPRIIKRAADN 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +  +LA  F+ +++H R          +       RL L +A A+++   L 
Sbjct: 502 FEPSIVAKFAINLAQSFNKYYAHTRIL--------DESPERDSRLALSYATATVLKEALR 553

Query: 576 IIGVESPNEM 585
           ++GVE+PNEM
Sbjct: 554 LLGVEAPNEM 563


>gi|306834549|ref|ZP_07467662.1| arginine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|296777690|gb|ADH43107.1| arginyl-tRNA synthetase [uncultured bacterium MID12]
 gi|304423351|gb|EFM26504.1| arginine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 563

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 134/610 (21%), Positives = 257/610 (42%), Gaps = 84/610 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R++N + E+D +  +        ++E P++   G L+   A  L++ L   P  IA 
Sbjct: 7   IAERIQNIVPELDQEQIIN-------LLEIPKNSDMGDLAF-PAFSLAKILRKAPQMIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNI 125
            +  ++      + +   G  +IN +L    +   IL  ++ +G +Y    +G+G  V I
Sbjct: 59  DVAEKMDATG-FEKIEAVGP-YINFFLDKKSISADILGQVIANGSDYASQDLGEGRNVAI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAM 241
            ++A+  +  D     Y  +  +   +   D+ + E    L   +E+ + + + +  +++
Sbjct: 177 DEEAVKAHPIDELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQWFRDESL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  R     L +  D F  E  ++      + +++D L  +G + E             
Sbjct: 237 VEFNRL-YDELGVSFDSFNGEAFYN----DKMDEVVDILTEKGLLEES------------ 279

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
               +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ 
Sbjct: 280 ----QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           S + K+L+AV   +  +  + ++       + ++G   K+S R G+ I            
Sbjct: 336 SAHFKQLKAVLNEMGFEWNE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVKR 392

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V   VG  +++F  L        DFD   +     E    YVQ
Sbjct: 393 AEDQINAKNPNLADKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR +SI R+A+          F  +V    S  D    +++  + ++PR+I+ A   
Sbjct: 452 YAHARIQSILRKAE----------FTPSVNQVYSLDDAESWEIVKLIQDFPRIIKRAADN 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +  +LA  F+ +++H R          +       RL L +A A+++   L 
Sbjct: 502 FEPSIVAKFAINLAQSFNKYYAHTRIL--------DESPERDSRLALSYATATVLKEALR 553

Query: 576 IIGVESPNEM 585
           ++GVE+PNEM
Sbjct: 554 LLGVEAPNEM 563


>gi|322374239|ref|ZP_08048771.1| arginine--tRNA ligase [Streptococcus sp. C150]
 gi|321276843|gb|EFX53916.1| arginine--tRNA ligase [Streptococcus sp. C150]
          Length = 563

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 132/609 (21%), Positives = 247/609 (40%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + ++  +++ E     + ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 4   KELIAAEIAKVVPELEQEN---IQNLLETPKNADMGDLAFP-AFSLAKVLRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I    + + V   G  +IN +L  S +   +L  ++  G  Y    IG G  +  +
Sbjct: 60  IAEKIDAS-NFEKVEAVGP-YINFFLDKSKISADVLGQVIAQGNHYADQNIGHGRNIAFD 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+ D LA+++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGS 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+  N  +     Y  +  +       D+ + E    L   +E+   + + +  ++++
Sbjct: 178 EEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLV 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R     L +  D +  E  ++      + +++D L  +G + E              
Sbjct: 238 EFNRL-YDELGVSFDSYNGEAFYN----DKMDEVVDLLTEKGLLQES------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ S
Sbjct: 280 ---QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQS 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------- 408
            + K+L+AV   +    +  ++       + ++G   K+S R G+ I             
Sbjct: 337 AHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRA 393

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                           V   VG  +++F  L        DFD   +     E    YVQY
Sbjct: 394 QAQIEAKNPNLPNKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGE-TGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR +SI R+A           F  +     S  D    ++I  + ++PR+I  A+   
Sbjct: 453 AHARIQSILRKAD----------FTPSADATYSLNDVESWEIIKLIQDFPRIINRASDNF 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L +
Sbjct: 503 EPSIVAKFAISLAQAFNKYYAHTRIL--------DQSPERDSRLALCYATATVLKEALRL 554

Query: 577 IGVESPNEM 585
           +GVE+P+EM
Sbjct: 555 LGVEAPDEM 563


>gi|289425965|ref|ZP_06427712.1| arginine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153508|gb|EFD02222.1| arginine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 586

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 129/582 (22%), Positives = 236/582 (40%), Gaps = 51/582 (8%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 39  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 98

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 99  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 157

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 158 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 217

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 218 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 276

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 277 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 314

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 315 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 374

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 375 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 432

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLD--FDLFPRN 483
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+ A +  P++D   DL   +
Sbjct: 433 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 491

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   + +E QL + L+ +  ++E       P+KL  YLY+LA  +   +      P
Sbjct: 492 WGRISVLDEPAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC---P 548

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 549 VLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 586


>gi|294788151|ref|ZP_06753394.1| arginine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483582|gb|EFG31266.1| arginine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 567

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 123/615 (20%), Positives = 241/615 (39%), Gaps = 86/615 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L N +++      +       IV++ P+D  HG    N  M  ++ +G +P  +A+
Sbjct: 3   LQQTLSNQIEQAFAVAGISG---SPIVLQSPKDAKHGDFQINGVMGAAKKVGQNPRELAQ 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +          +AG GF+NL LSP +L + LS  +                + I+
Sbjct: 60  KIADELNGKGAFAGAEVAGLGFVNLRLSPEFLAQQLSGSLN------IEKTATPNTIVID 113

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R +++GD+++ ++ F G++V R+ ++ D G Q   L   +  + +
Sbjct: 114 YSSPNLAKEMHVGHLRSSIIGDSISRVLEFLGHKVIRQNHVGDWGTQFGMLVAYLVEQQK 173

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
                  +DL + Y             AD     ++     +E  L + + + V+  ++ 
Sbjct: 174 DNAEFKLADLEQFYRNAKIRFDEDAAFADLAREYVVKLQSGDEAVLALWRQF-VEISLQH 232

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +    L ++        E  ++    + + ++I+ L  +G                  
Sbjct: 233 AEEVYAKLGLKLQRADVAGESSYN----ADLHNVINELEAKGLA---------------V 273

Query: 303 DMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
           D D  +++F        G+     + K  G + Y   D A  + +  + G   ++YV+ +
Sbjct: 274 DSDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGGTRLLYVVDT 333

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
               + K+L   +         ++   +     + +DG P K   R+GD + L  ++DE 
Sbjct: 334 RQDLHFKQLFTASRKAGWLPENVSAEFIGFGTMMSKDGKPFK--TRSGDTVKLVDLLDEA 391

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L +  +    FD+  +    + N 
Sbjct: 392 VERATKLVRDKNPKLSDLDAVKIGETVGIGAVKYADLSKNRTSDYVFDWDNMLSF-EGNT 450

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R +S+F++  D            NV          E QL V L ++  V++
Sbjct: 451 APYLQYAYTRVQSVFKKVGDW-----------NVQAALKLEQPLEQQLAVELLKFEDVLQ 499

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +      P+ LA YLY LA++F   +           ++A    +   RL+L       +
Sbjct: 500 SVAETSFPHYLANYLYQLATLFSRFYEAC------PILKAEG-DVRDSRLKLAQLTGETL 552

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G++  + M
Sbjct: 553 KMGLDLLGIDVLDVM 567


>gi|282854895|ref|ZP_06264229.1| arginine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582041|gb|EFB87424.1| arginine--tRNA ligase [Propionibacterium acnes J139]
          Length = 556

 Score =  408 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 234/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 9   AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 68

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S  V      G     K  +V I++ + N    MHVGH
Sbjct: 69  PEIAGPGFINLRLRADVLARVASDFVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 127

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 128 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 187

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 188 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYSRLSVLLTD 246

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 247 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 284

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 285 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 344

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 345 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 403 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 462 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 517

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 518 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|55822038|ref|YP_140479.1| arginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627012|ref|YP_819631.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|81559968|sp|Q5M1Z3|SYR_STRT1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122268383|sp|Q03MY7|SYR_STRTD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55738023|gb|AAV61664.1| arginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116100289|gb|ABJ65435.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 563

 Score =  408 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/609 (21%), Positives = 248/609 (40%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + ++  +++ E     + ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 4   KELIAAEIAKVVPELEQEN---IQNLLEIPKNADMGDLAFP-AFSLAKVLRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I    + + V   G  +IN++L  S +   +L  ++  G  Y    IG G  +  +
Sbjct: 60  IAEKIDAS-NFEKVEAVGP-YINIFLDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFD 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+ D LA+++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGS 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+  N  +     Y  +  +       D+ + E    L   +E+   + + +  ++++
Sbjct: 178 EEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLV 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R     L +  D +  E  ++      + +++D L  +G + E              
Sbjct: 238 EFNRL-YDELGVSFDSYNGEAFYN----DKMDEVVDILTEKGLLQES------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ S
Sbjct: 280 ---QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQS 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------- 408
            + K+L+AV   +    +  ++       + ++G   K+S R G+ I             
Sbjct: 337 AHFKQLKAVLKEMGYNWSD-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRA 393

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                           +   VG  +++F  L        DFD   +     E    YVQY
Sbjct: 394 QAQIEAKNPNLPNKEAIAHAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGE-TGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR +SI R+A           F  +     S  D    ++I  L ++PR+I  A+   
Sbjct: 453 AHARIQSILRKAD----------FTPSADATYSLNDVESWEIIKLLQDFPRIINRASDNF 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L +
Sbjct: 503 EPSIVAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALCYATATVLKEALRL 554

Query: 577 IGVESPNEM 585
           +GVE+P+EM
Sbjct: 555 LGVEAPDEM 563


>gi|322388726|ref|ZP_08062323.1| arginine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140345|gb|EFX35853.1| arginine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 563

 Score =  408 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 133/616 (21%), Positives = 248/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSDMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  + +  ++L +++     Y    IG 
Sbjct: 53  PQMIAADIAEKIN-SQAFEKVVATGP-YVNFFLDKAAISGQVLQNVITEKEHYADQEIGN 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYKTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDILSEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F N IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFANSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAISRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPEAGANYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 KRAADNYEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|314967238|gb|EFT11337.1| arginyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981625|gb|EFT25718.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092264|gb|EFT64240.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094840|gb|EFT66816.1| arginyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327328683|gb|EGE70443.1| arginine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 582

 Score =  408 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 234/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S  V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRADVLARVASDFVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYSRLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 488 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 543

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 544 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|83319739|ref|YP_424360.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|109895004|sp|Q2SSA3|SYR_MYCCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83283625|gb|ABC01557.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 554

 Score =  408 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 174/581 (29%), Positives = 296/581 (50%), Gaps = 45/581 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           + LK I  K  + K+     +IE  ++   G LS++  +I S+ +   PL +A     ++
Sbjct: 11  DDLKNICQKFNITKE----PIIEINKNNTPGLLSSSICLISSKQVNKKPLDLANDFKEQL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +  +  S+ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNNYSSIQIANPGFLNVLVKPEILSNVISNVLTLKSKYG-NLEKQNKIINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY+V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYKVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAMMKII 245
           D+  PE  Y G     + K + +KY+ +  +         ++    + K  S+   +KII
Sbjct: 185 DAKKPENCYAGEMYDDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++     +   Y                  
Sbjct: 245 KQQLADFNVKIRHWSSEQEVY--DTHQIEKVLKLYKSKDASYY----------------K 286

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
                 ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 287 DGAEFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHHLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           M+  + ++  +D D   +  ++  NP++Y QYA ARC SI  QAK              V
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPIYYAQYATARCHSILNQAK-------IKKITPLV 459

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++       
Sbjct: 460 KETNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------E 513

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +  NN +LT +RL  + A+  ++ +   IIG++   EM
Sbjct: 514 IKIIDENNLELTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554


>gi|327335290|gb|EGE77000.1| arginine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 582

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSYHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 488 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 543

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 544 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|325128541|gb|EGC51414.1| arginyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 572

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 117/587 (19%), Positives = 236/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG+   N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGNFQINGVMGTAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L P +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRPEFLAQNIQTALND-ARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +  F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            G + Y + DLA  + +      D ++YV+    + + ++L   +         +     
Sbjct: 307 GGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPESVGAAFV 366

Query: 387 ELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             S+++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +   +    
Sbjct: 425 IGSIKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEWDANAPTV 483

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L            +  E QL   L ++  V+++      P+ LA YLY +A++F   +  
Sbjct: 484 L-----------TEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL       +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 572


>gi|50843566|ref|YP_056793.1| arginyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81611018|sp|Q6A5X8|SYR_PROAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50841168|gb|AAT83835.1| arginyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 556

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 234/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 9   AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 68

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S  V      G     K  +V I++ + N    MHVGH
Sbjct: 69  PEIAGPGFINLRLRADVLARVASDFVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 127

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 128 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 187

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 188 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYSRLSVLLTD 246

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 247 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 284

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 285 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 344

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 345 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 403 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 462 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 517

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 518 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|315104702|gb|EFT76678.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315107765|gb|EFT79741.1| arginyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 582

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 234/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S  V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRADVLARVASDFVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYSRLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 488 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 543

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 544 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|161511522|ref|NP_872860.2| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 575

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 124/616 (20%), Positives = 235/616 (38%), Gaps = 72/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S ++K  +     +  VE       ++ +      G    N AM  ++ L ++
Sbjct: 1   MNIQQILSDKIKQAMMIAGAEANVEP------LVRQSSKPEFGDYQANGAMAAAKKLAMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I+  + +   VD + IAG GFIN++L PS+L K  +  + +     +    + 
Sbjct: 55  PREFAQKILDNLDVSDMVDKLEIAGPGFINIFLKPSWLAKQANFALQAVNFGIKTA--QP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD +   + F G  V R  ++ D G Q   L   
Sbjct: 113 QTILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +          E +Y            A +       F E+    +VK  S   
Sbjct: 173 LEKMENEQASEMQLSDLEAFYRA----------AKESYDSDQIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + + H+     +++ R + +     +   +    +   I+   K+K   
Sbjct: 223 YCRTMWKKLVDITMHHNQ----ENYDRLNVTLTEKDVMGESLYNPMLPEIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS--TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
             D     +         GD +   + KSDG + Y   D+A  K +YE    D  +    
Sbjct: 279 VEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVDRALVFSD 338

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S  + ++++   +        A  ++      + L +DG P K   R+G  + L+ ++DE
Sbjct: 339 SRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLGKDGKPFK--TRSGGTVKLKDLLDE 396

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      V   SV++  L +  +    FD+  +    + N
Sbjct: 397 AVERADKLISARSTNLTVAEKSAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGN 455

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R RSIF +A         ++ P  +  +    +  E  L + L ++   +
Sbjct: 456 TAPYMQYAYTRIRSIFARA---------EIDPDTLTGEMQLTEEKERTLALKLLQFEEAL 506

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  YLY+LA +F   +           +   +  +   RL+L    A  
Sbjct: 507 TAVAKEGMPHILCQYLYELAGIFSSFYEAC-------PMLNADEAIKHSRLRLASLTAKT 559

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+++  +M
Sbjct: 560 LKQGLDLLGIKTVEKM 575


>gi|320547653|ref|ZP_08041938.1| arginine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447728|gb|EFW88486.1| arginine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 563

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 138/610 (22%), Positives = 256/610 (41%), Gaps = 84/610 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R++  + E+D +  V        ++E P++   G L+   A  L+R L   P  IA 
Sbjct: 7   IAERIQTIVPELDQEQIVN-------LLEIPKNSDMGDLAFP-AFSLARILRKAPQMIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I  ++      + +   G  +IN +L    +   +L  ++ +G +Y    +G+G  V I
Sbjct: 59  DIAEKLDKTG-FEKIEAVGP-YINFFLDKKSISADVLGKVIANGSDYASQDLGQGRNVAI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPFSIGHLRSTVIGDSLANIFEKIGYKAVKINHLGDWGKQFGMLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAM 241
            ++A+  +  D     Y  +  +   K   D+ + E    L   +E+ + + + +  +++
Sbjct: 177 DEEAVKAHPIDELLKLYVRINAEAETKPELDEEAREWFRKLEAGDEEAISLWQWFRDESL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  R     L +  D F  E  ++      + +++D L  +G + E             
Sbjct: 237 VEFNRL-YNELGVSFDSFNGEAFYN----DKMDEVVDILTEKGLLEES------------ 279

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
               +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ 
Sbjct: 280 ----QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           S + K+L+AV   +  K  + ++       + ++G   K+S R G+ I            
Sbjct: 336 SAHFKQLKAVLNEMDFKWNE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVKR 392

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V   VG  +++F  L        DFD   +     E    YVQ
Sbjct: 393 AEDQINAKNPNLANKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR +SI R+A+          F  +V    S  D    ++I  + ++PR+I+ A   
Sbjct: 452 YTHARIQSILRKAE----------FTPSVNDVYSLNDAESWEIIKLIQDFPRIIKRAADN 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R       +   N +    RL L +A A+++   L 
Sbjct: 502 FEPSIIAKFAISLAQSFNKYYAHTR-------ILDENPE-RDSRLALSYATATVLKEALR 553

Query: 576 IIGVESPNEM 585
           ++GVE+PNEM
Sbjct: 554 LLGVETPNEM 563


>gi|322378000|ref|ZP_08052487.1| arginine--tRNA ligase [Streptococcus sp. M334]
 gi|321280982|gb|EFX57995.1| arginine--tRNA ligase [Streptococcus sp. M334]
          Length = 563

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 131/616 (21%), Positives = 245/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  +I      + +   G  ++N +L  S +  ++L +++     Y    IGK
Sbjct: 53  PQMIAAELAEKIN-SQAFEKIVATGP-YVNFFLDKSAISAQVLQAVITQKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDILSEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAQAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|226939931|ref|YP_002795004.1| arginyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782968|sp|C1D5W4|SYR_LARHH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226714857|gb|ACO73995.1| Syr [Laribacter hongkongensis HLHK9]
          Length = 573

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 125/613 (20%), Positives = 235/613 (38%), Gaps = 76/613 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  L + L        V      + +++       G    N  M  ++   ++P  +A+
Sbjct: 3   LTQLLHDKLAAALIAAGVPDA---QPLLQPASRPEFGDFQANGVMAAAKQRKMNPRELAQ 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++ ++ +      + IAG GFIN+ L+P +L K L   V+     G   + +  +V +E
Sbjct: 60  QVIDKLDLAGIASKIEIAGPGFINITLAPDFLAKRL-DTVLDDARLGVRSVTEPQRVMVE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R  ++GDTLA ++ F G  + R  ++ D G Q   L   +    Q
Sbjct: 119 YSSPNLAKEMHVGHLRSTIIGDTLARVVEFLGNNMVRGNHVGDWGTQFGMLTAYLVETRQ 178

Query: 187 QALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMK 243
               + +    E +Y    ++       AD   + ++     +   L + + + V   + 
Sbjct: 179 AGKADLELSDLETFYRNAKIRFDEDPVFADTARNYVVRLQGGDADVLKLWEQF-VDVSLA 237

Query: 244 IIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                 + L +         E  ++      +  I+D LA +  + E           + 
Sbjct: 238 HCEAVYRKLGVGLTRADVRGESAYN----DDLPVIVDELAAKNLLSE-------DDGAKV 286

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
             +D     FR    GD +   + K DG + Y   DL   + ++ E   D +IYV+ +  
Sbjct: 287 VYLDE----FR-NHDGDPMGVIVQKKDGGFLYTTTDLGAVRYRHKELNLDRVIYVVDARQ 341

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
           S + +++  +          +++        +  DG P K   R+G  + L  ++DE   
Sbjct: 342 SQHFQQMFTICRKAGFAPEAMSLEHVGFGTMMGDDGKPFK--TRSGGTVKLIELLDEAEE 399

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    F++  +    + N   
Sbjct: 400 RAYALVSEKNPDLPEEEKRKIAHAVGIGAVKYADLSKNRNSDYIFNWDLML-AFEGNTAP 458

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAY R  SIFR+         FD     +I      + +E QL + LA++  V+   
Sbjct: 459 YLQYAYTRVASIFRKVD------RFDASAPLLIT-----EPAEKQLALMLAQFSDVLNEV 507

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLY +A+ F   +           +  +       RL+L    A  + +
Sbjct: 508 ARTCFPHLLTQYLYQVATQFMRFYEAC-------PILKSEGATQASRLKLARITADTLKT 560

Query: 573 GLNIIGVESPNEM 585
           GL ++G+E    M
Sbjct: 561 GLGLLGIEVLESM 573


>gi|45361659|ref|NP_989403.1| arginyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
           tropicalis]
 gi|82186176|sp|Q6P1S4|SYRC_XENTR RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|40787810|gb|AAH64888.1| arginyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 660

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/630 (20%), Positives = 245/630 (38%), Gaps = 90/630 (14%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
            + A         +     +++        + +   +    G    N+AM +++ L    
Sbjct: 75  NINAQIQEIFGTAIGAAYPELQNAP-----LAVTPSQQPKFGDYQCNSAMAITQMLKAMN 129

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             + P  IA+ IV  I  +  V+ V IAG GFIN++L   +  K +S ++V+G++     
Sbjct: 130 QKVSPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDFTSKQISKLLVNGVQPPV-- 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           I +  KV ++F S N    MHVGH R  V+GD++  L  F G++V R  ++ D G Q   
Sbjct: 188 IWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFVGHDVLRLNHLGDWGTQFGM 247

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD- 235
           L   +  ++   L  +    P G     Y +      + K   E   F +  +  +V+  
Sbjct: 248 LIAHLQDKFPDYLTVSP---PIGDLQSFYKE------SKKRFDEDEEFKKRAYQCVVQLQ 298

Query: 236 -------YSVQAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGY 285
                   +   +  + R + + +    DI I    E  +       +  ++     +G 
Sbjct: 299 NKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFYQ----DRMIGVVKEFEEKGL 354

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           V                  + ++++F     G  V   ++KSDG +TY  +DLA  K + 
Sbjct: 355 VQVD---------------EGRKVVFPP---GCSVPLTIVKSDGGFTYDTSDLAALKQRL 396

Query: 346 -ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            E   D +IYV+ S  + +++ + +    +     ++  +      +       K   R+
Sbjct: 397 QEEKADMIIYVIDSGQAIHMQNVFSAGRMIGWYDPKVTRIEHAGFGVVLGEDKKKFKTRS 456

Query: 405 GDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELL 435
           GD + L  ++DE                             V    +++  L        
Sbjct: 457 GDTVRLIDLLDEGLKRSMEKLKDKGRDKVLTAEELLAAQTSVAFGCIKYADLSHNRMNDY 516

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F F K+ +  + N   Y+ YAY R RSI R A     DL        +I +       E
Sbjct: 517 IFSFDKMLD-DRGNTAAYLLYAYTRIRSIARLANISDEDLHKAAKETEIILE----HEKE 571

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L   +  +P +++        + L  YLY+LA+ F   + +     + R       K+
Sbjct: 572 WKLSKCILRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQ-TGQIVKV 630

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            M RL L  A A+++  G +I+G++   +M
Sbjct: 631 NMSRLLLCDATAAVMAKGFDILGIKPVQKM 660


>gi|55820150|ref|YP_138592.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|81561144|sp|Q5M6I4|SYR_STRT2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55736135|gb|AAV59777.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 563

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/609 (21%), Positives = 249/609 (40%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + ++  +++ E     + ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 4   KELIAAEIAKVVPELEQEN---IQNLLEIPKNADMGDLAFP-AFSLAKVLRKAPQMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I    + + V   G  +IN++L  S +   +L  ++  G  Y    IG G  +  +
Sbjct: 60  IAEKIDAS-NFEKVEAVGP-YINIFLDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFD 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+ D LA+++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGS 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+  N  +     Y  +  +       D+ + E    L   +E+   + + +  ++++
Sbjct: 178 EEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLV 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R     L +  D +  E  ++      + +++D L ++G + E              
Sbjct: 238 EFNRL-YDELGVSFDSYNGEAFYN----DKMDEVVDILTKKGLLQES------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ S
Sbjct: 280 ---QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQS 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------- 408
            + K+L+AV   +    +  ++       + ++G   K+S R G+ I             
Sbjct: 337 AHFKQLKAVLKEMGYNWSD-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRA 393

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                           +   VG  +++F  L        DFD   +     E    YVQY
Sbjct: 394 QAQIEAKNPNLPNKEAIAHAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGE-TGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR +SI R+A           F  +     S  D    ++I  L ++PR+I  A+   
Sbjct: 453 AHARIQSILRKAD----------FTPSADATYSLNDVESWEIIKLLQDFPRIINRASDNF 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L +
Sbjct: 503 EPSIVAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALCYATATVLKEALRL 554

Query: 577 IGVESPNEM 585
           +GVE+P+EM
Sbjct: 555 LGVEAPDEM 563


>gi|149006956|ref|ZP_01830637.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147761557|gb|EDK68522.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332071148|gb|EGI81643.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 563

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 247/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S+L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASKLSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETSGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|289427907|ref|ZP_06429611.1| arginine--tRNA ligase [Propionibacterium acnes J165]
 gi|289158790|gb|EFD06990.1| arginine--tRNA ligase [Propionibacterium acnes J165]
          Length = 586

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 129/582 (22%), Positives = 236/582 (40%), Gaps = 51/582 (8%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 39  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 98

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 99  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 157

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 158 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLY 217

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 218 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 276

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 277 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 314

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 315 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 374

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 375 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 432

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLD--FDLFPRN 483
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+ A +  P++D   DL   +
Sbjct: 433 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 491

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   + +E QL + L+ +  ++E       P+KL  YLY+LA  +   +      P
Sbjct: 492 WGRISVLDEPAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC---P 548

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 549 VLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 586


>gi|295131647|ref|YP_003582310.1| arginine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376321|gb|ADE00176.1| arginine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 556

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 9   AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 68

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 69  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 127

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 128 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 187

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 188 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 246

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 247 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 284

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 285 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 344

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 345 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 403 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 462 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 517

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 518 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|313501065|gb|ADR62431.1| ArgS [Pseudomonas putida BIRD-1]
          Length = 578

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 119/598 (19%), Positives = 233/598 (38%), Gaps = 69/598 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +    D+  V IAG GF+N + +   L   L + +      G    G   KV I+
Sbjct: 65  KLINALPTSADISKVEIAGPGFLNFFQNTDALANRLDAALAD-AHLGARKAGPAQKVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G  V R+ ++ D G Q   L   +    +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDNVIRQNHVGDWGTQFGMLMAYLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   + + L +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPECLALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++      + +++ +L  +G + E        +  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----DDLANVVADLKAKGLLVE-------DQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             +D  +        GD +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLDEFK-----NSEGDPLPVIVQKADGGYLYATTDLAAVRYRSNVLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKM-------SKRA 404
           + +  ++  VA         + +       +          RDG  +K+        +RA
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMQMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAKERA 403

Query: 405 GDFITL----------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              +            RH+ + VG  +V++  L +  +    F+F  +    + N   Y+
Sbjct: 404 YALVKEKNPSLADDELRHIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            YAY R   +FR+    F ++D  +  +            E  L   LA++  ++ N   
Sbjct: 463 LYAYTRVAGVFRKLGKGFDEVDGKIVLQAA---------HEQDLAARLAQFGEILNNVAE 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              P+ L  YLYDLA +F   + +         + A        RL+L       +  
Sbjct: 514 KGTPHVLCSYLYDLAGLFSSFYENC------PILAAETPSQQQSRLRLAALTGRTLKQ 565


>gi|313763775|gb|EFS35139.1| arginyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313793676|gb|EFS41707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802987|gb|EFS44195.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313810614|gb|EFS48328.1| arginyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813755|gb|EFS51469.1| arginyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313816906|gb|EFS54620.1| arginyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313829707|gb|EFS67421.1| arginyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313839384|gb|EFS77098.1| arginyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314916670|gb|EFS80501.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918872|gb|EFS82703.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920883|gb|EFS84714.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314932325|gb|EFS96156.1| arginyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314956601|gb|EFT00853.1| arginyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314959481|gb|EFT03583.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314964676|gb|EFT08776.1| arginyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314968918|gb|EFT13016.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315079335|gb|EFT51336.1| arginyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315082371|gb|EFT54347.1| arginyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315100250|gb|EFT72226.1| arginyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315102574|gb|EFT74550.1| arginyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315109666|gb|EFT81642.1| arginyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327455900|gb|EGF02555.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456007|gb|EGF02662.1| arginyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327458052|gb|EGF04707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328757213|gb|EGF70829.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328757596|gb|EGF71212.1| arginyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 582

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 488 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 543

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 544 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|90416671|ref|ZP_01224601.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331424|gb|EAS46660.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 579

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 247/611 (40%), Gaps = 66/611 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L            V  +    + +        G    N AM  ++ L ++P  +AE
Sbjct: 3   IKEILNQRFSAAMQAAGVPSECSPILAL--SGKPQFGDYQANGAMAAAKRLKMNPRDLAE 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+    +D   D + IAG GFIN++L  ++L   L +  +   +   +L G   +V ++
Sbjct: 61  KIIQLADLDGIADRLEIAGPGFINIHLCDAFLTASLGTNTLY-TQSESDLDGTQKRVVVD 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    MHVGH R  ++GD +A ++ + G+ V R+ ++ D G Q   L   +    Q
Sbjct: 120 YSSPNLAKEMHVGHLRSTIIGDAVARVLEYQGHTVLRQNHMGDWGTQFGMLIAEL---EQ 176

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           Q      ++L  G     Y      + + K+    L F +     +VK  S  A  + + 
Sbjct: 177 QLSEGEQAELALGDLELFY------QQSKKHFDADLEFADTARAYVVKLQSGDAHCRGLW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                +++ H++ I    + + +     + I   +      + +L    +K     + D 
Sbjct: 231 QKFIQVSVAHNLEI----YAQLNVGLTAEHIMPESAYNDDLQNVLDDLLAKDLA-LESDG 285

Query: 307 KQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
            +++F    +   G+     + KS G + Y  +DLA  + +  +   D ++Y + +  S 
Sbjct: 286 AKVVFLDELADKNGNPSPMIVQKSGGGFLYATSDLAAMRYRVGQLQADRILYFIDARQSL 345

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           ++K++ A A         +++        + +DG P K   R+G  + L  ++ E     
Sbjct: 346 HMKQVFAAARKADYVSDAVSLEHHPFGTMMGKDGRPFK--TRSGGTVKLADLLVEAVERA 403

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  ++++  L +  +    FD+  +    + N   Y+
Sbjct: 404 EQLLRSKNTDLGEDEISNIARSVGIGAIKYADLSKTRTNDYIFDWDAMLSF-EGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY R RSIFR+A         ++         S  +  E  LI+ L ++  V++    
Sbjct: 463 QYAYTRIRSIFRKAGISAESFSAEI---------SITEHQEKALIMKLLQFDNVVDQVAA 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+ L  Y+Y+LAS +   + H    P L+       +L   RLQL    +  I  GL
Sbjct: 514 EGYPHILCNYVYELASAYMTFYEHC---PVLK--DEVPEELQKSRLQLCKLTSETIAKGL 568

Query: 575 NIIGVESPNEM 585
           +++G+E   +M
Sbjct: 569 DLLGIEVMEKM 579


>gi|315612289|ref|ZP_07887203.1| arginine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315682|gb|EFU63720.1| arginine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 563

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 134/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  ++L  ++     Y    IGK
Sbjct: 53  PQMIATDIAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQDVITEKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENIVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAEKDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D  A +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDIFAEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA     K E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKKEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +Q +++      + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSQ-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F  +     S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPDTASNYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAIGLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|146280942|ref|YP_001171095.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166232826|sp|A4VH02|SYR_PSEU5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145569147|gb|ABP78253.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 579

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 124/599 (20%), Positives = 232/599 (38%), Gaps = 70/599 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  +D +HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRHLIQQALVRLTSEGVLPEGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGMKPRELAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  +  V IAG GF+N + +   L + L + +    +   +      +V I+
Sbjct: 65  KLIAALPQDAQISKVEIAGPGFLNFFQNSDALAQRLETALAD-AQLAVHKASAKQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +  ++ F G EV R+ ++ D G Q   L L+      
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHVGDWGTQFGML-LAYLEEKP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A  +  +DL + Y           E AD+    ++     + + L +   ++  + +  
Sbjct: 183 AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQAGDAQCLSLWTRFNDIS-LSH 241

Query: 245 IRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     LN++        E  ++    + + DI++ L  +G + E           Q  
Sbjct: 242 CQKIYDRLNVKLTPADVKGESAYN----ADLADIVEALREKGLLTE-------DNGAQCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHS 361
            +D  +        G+ +   + K+ G Y Y   DLA  + +  +   D ++Y +    +
Sbjct: 291 FLDEFK-----NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +    VA         + +       +   DG P K   R G  + L  ++DE    
Sbjct: 346 LHFQMAFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEQR 403

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    F+F  +    + N   Y
Sbjct: 404 AYTLVKGKNPELDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLSF-EGNTAPY 462

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R  S+FR+      ++           Q       EL L   LA++  V+ +  
Sbjct: 463 LLYAYTRVASVFRKLGKGIDEISG---------QIQLDAEQELALAAKLAQFGEVLNSVG 513

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              EP+ L  YLYDLA +F   + H         + A        RL+L       +  
Sbjct: 514 EKGEPHLLCAYLYDLAGLFSSFYEHC------PILGAEQEAQKQSRLRLAALTGRTLKQ 566


>gi|148550164|ref|YP_001270266.1| arginyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166232825|sp|A5WAC2|SYR_PSEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148514222|gb|ABQ81082.1| arginyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 578

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 119/598 (19%), Positives = 232/598 (38%), Gaps = 69/598 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +    D+  V IAG GF+N + +   L   L + +      G    G   KV I+
Sbjct: 65  KLINALPASADISKVEIAGPGFLNFFQNTDALANRLDAALAD-AHLGARKAGPAQKVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G  V R+ ++ D G Q   L   +    +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDNVIRQNHVGDWGTQFGMLMAYLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   + + L +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPECLALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++      + +++ +L  +G + E        +  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----DDLANVVADLKAKGLLVE-------DQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             +D  +        GD +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLDEFK-----NSEGDPLPVIVQKADGGYLYATTDLAAVRYRSNVLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKM-------SKRA 404
           + +  ++  VA         + +       +          RDG  +K+        +RA
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMQMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAKERA 403

Query: 405 GDFITL----------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              +            RH+ + VG  +V++  L +  +    F+F  +    + N   Y+
Sbjct: 404 YALVKEKNPSLADDELRHIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            YAY R   +FR+    F ++D  +               E  L   LA++  ++ N   
Sbjct: 463 LYAYTRVAGVFRKLGKGFDEVDGKIV---------LHAAHEQDLAARLAQFGEILNNVAE 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              P+ L  YLYDLA +F   + +         + A        RL+L       +  
Sbjct: 514 KGTPHVLCSYLYDLAGLFSSFYENC------PILAAETPSQQQSRLRLAALTGRTLKQ 565


>gi|289167053|ref|YP_003445320.1| arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS)
           [Streptococcus mitis B6]
 gi|288906618|emb|CBJ21452.1| arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS)
           [Streptococcus mitis B6]
          Length = 563

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 133/616 (21%), Positives = 248/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILN-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  +I      + V   G  ++N +L  S +  ++L +++     Y    IGK
Sbjct: 53  PQMIAAELAEKIN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVITEKEHYADQTIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVDILSEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    ++ ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLKEMGYDWSE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETEANYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R       +   N +    RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTR-------ILDENPE-RDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|164687639|ref|ZP_02211667.1| hypothetical protein CLOBAR_01281 [Clostridium bartlettii DSM
           16795]
 gi|164603413|gb|EDQ96878.1| hypothetical protein CLOBAR_01281 [Clostridium bartlettii DSM
           16795]
          Length = 566

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 136/617 (22%), Positives = 252/617 (40%), Gaps = 86/617 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   + N LKE    + +E+ +    +IE P +   G  +      L++     P  
Sbjct: 1   MQDFKIAIANCLKEKIEDLTLEEIVA---LIEVPPNKEMGDFAF-PCFKLAKVFRKAPNM 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTK 122
           IA  +   I+    +  V   G G++N +++ S L +  ++ ++    +YG   +G+   
Sbjct: 57  IAADLAENIEAKGAISKVMPLG-GYVNFFVNKSQLAETVINDVLTKKEKYGHTDLGQDKA 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           V I+F S N   P H+GH R  V+G+ L  +    GY V R  ++ D G Q   L ++  
Sbjct: 116 VVIDFSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYNVVRVNHLGDYGTQFGKLIVAFK 175

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQ 239
            W  ++A+  N   +PE     V      ++         +      W   ++  D   +
Sbjct: 176 LWGSKEAVEAN--PIPELLKLYVKFHEEAEQ------KPEMEDEARAWFTKLENGDEEAK 227

Query: 240 AMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPK 295
           A+ +  RD+ LK     +D+   E D + G+      +  +ID L  +G + +       
Sbjct: 228 ALWQWFRDESLKEFARVYDLLDIEFDSYAGESFYSDKMGVVIDQLKEKGLLVQ------- 280

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           S+ T   D+++  +              + K+DGS  Y   DLA    +     FD  IY
Sbjct: 281 SQGTNVVDLEQYNM----------PPALITKNDGSTLYMTRDLAAAIYRKNTYDFDKCIY 330

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+GS  S + ++L  V   +  + ++  + +   +    +G    MS R G  + L  V+
Sbjct: 331 VVGSQQSLHFQQLFKVLELMGYEWSKDLIHVPFGMVALEEGT---MSTRKGRVVFLEDVL 387

Query: 415 -------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                     +VG  +V F  L     +   F + +      E 
Sbjct: 388 KQAVEKTKEIVLSKNPNAKNVEQIAKQVGVGAVVFQELSNSRIKDYTFSWSRTLSFEGE- 446

Query: 450 PVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
              YVQY +ARC ++ R+A +++  D+++DL         SE D +E+  +  +  + + 
Sbjct: 447 TGPYVQYTHARCCAVLRKAEEEVTADINYDLL--------SEGDGAEV--LKVIGSFNKA 496

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A    EP+ +  ++ DLA  F+  +           +  ++ ++   RL LV A   
Sbjct: 497 ILAAMRKNEPHIITRFVLDLAQAFNKFYHDN-------PILVDDVEVRKARLALVAATRQ 549

Query: 569 IINSGLNIIGVESPNEM 585
            I + L ++G+ +P  M
Sbjct: 550 TIENALALLGMHAPERM 566


>gi|148998128|ref|ZP_01825641.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168577111|ref|ZP_02722931.1| arginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068691|ref|YP_003877657.1| arginyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147756138|gb|EDK63181.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577269|gb|EDT97797.1| arginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306410228|gb|ADM85655.1| Arginyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 563

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 247/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F   +    S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPEIAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|332994027|gb|AEF04082.1| arginyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 576

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 138/615 (22%), Positives = 239/615 (38%), Gaps = 69/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A   +R    L+ +  +          I + R      G    N AM L++ L   
Sbjct: 1   MNIHALLINRFSEALETMGVENAP-------IPVSRSARPEFGEYQFNGAMALAKQLRQK 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  +K+D     + +AG GFIN++L+  +L       +              
Sbjct: 54  PRDIAEKIVEIVKLDDVASKLEVAGPGFINVHLNNEWLANQCELALHDPRIGVAKSPE-- 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +  ++ F G++V R+ ++ D G Q   L   
Sbjct: 112 QTVVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHKVIRQNHMGDWGTQFGMLLAH 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + +Q +        E +Y    ++            +   F +     +VK      
Sbjct: 172 LSDKLEQEVAETALSDLEDFYREAKVRF----------DDEEGFADRAREYVVKLQGGDE 221

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               + +    ++I H    SED + + + S  R  I   +   +    ++   K K   
Sbjct: 222 KCLSLWEKFIDVSIAH----SEDVYKKLNVSLTRADIMGESAYNHDLANVISELKEKGIA 277

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             D    Q++F    +   G+     + KS G Y Y   DLA  + +      D  + + 
Sbjct: 278 VED-QGAQVVFIPELADKEGNPAVYIVQKSGGGYLYATTDLAAMRYRSGTLNADRTLILT 336

Query: 357 GSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSK------------- 402
            +  + + K+ E V       ++AQ        + L  DG P K                
Sbjct: 337 DARQALHFKQTEIVGRKAGFMEEAQTYEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEA 396

Query: 403 --RAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RAG  I  R           V  +VG  +V++  L +  +    F++  +    + N 
Sbjct: 397 VERAGKLIAERDNDLSADELAEVARKVGIGAVKYADLSKNRTTDYMFNWDTMLSF-EGNT 455

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R +S+FR+A      +  D+         +  +  E  L V L ++  V+ 
Sbjct: 456 APYLQYAYTRVKSLFRKAGVAIETMPVDI---------NIVEKQEHALSVLLLQFEEVVG 506

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +    P+ L  YLY+LAS F   +      P L+       K+   RL L   VAS +
Sbjct: 507 LVSRDATPHVLCTYLYELASAFMSFYEAC---PMLK--DGIELKVRDSRLALSALVASTL 561

Query: 571 NSGLNIIGVESPNEM 585
           + GLN++G+E+  +M
Sbjct: 562 SQGLNLLGIETLEKM 576


>gi|312863951|ref|ZP_07724188.1| arginine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517649|ref|ZP_08070514.1| arginine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311100517|gb|EFQ58723.1| arginine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322123726|gb|EFX95311.1| arginine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 563

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/609 (21%), Positives = 248/609 (40%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + ++  +++ E     + ++E P++   G L+   A  L++ L   P  IA  
Sbjct: 4   KELIAAEIAKVVPELEQEN---IQNLLETPKNADMGDLAFP-AFSLAKVLRKAPKMIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I  +I    + + V   G  +IN +L  S +   +L  ++  G  Y    IG G  +  +
Sbjct: 60  IAEKIDAS-NFEKVEAVGP-YINFFLDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFD 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P  +GH R  V+ D LA+++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 118 MSSPNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGS 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+  N  +     Y  +  +       D+ + E    L   +E+   + + +  ++++
Sbjct: 178 EEAVKANPINELLQLYVRINAEAEKDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLV 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R     L++  D +  E  ++      + +++D L  +G + E              
Sbjct: 238 EFNRL-YDELDVSFDSYNGEAFYN----DKMDEVVDILTEKGLLQES------------- 279

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ S
Sbjct: 280 ---QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQS 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------- 408
            + K+L+AV   +    +  ++       + ++G   K+S R G+ I             
Sbjct: 337 AHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRA 393

Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                           V   VG  +++F  L        DFD   +     E    YVQY
Sbjct: 394 QAQIEAKNPNLPNKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGE-TGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR +SI R+A           F  +     S  D    ++I  + ++PR+I  A+   
Sbjct: 453 AHARIQSILRKAD----------FTPSEDATYSLNDVESWEIIKLIQDFPRIINRASDNF 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L +
Sbjct: 503 EPSIVAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALCYATATVLKEALRL 554

Query: 577 IGVESPNEM 585
           +GVE+P+EM
Sbjct: 555 LGVEAPDEM 563


>gi|307707761|ref|ZP_07644240.1| arginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616259|gb|EFN95453.1| arginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 563

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 131/616 (21%), Positives = 245/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  +I      + V   G  ++N +L  + +  ++L +++     Y    IGK
Sbjct: 53  PQMIAAELAEKIN-SQAFEKVVATGP-YVNFFLDKNAISAQVLQAVITEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLKEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPGLENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|256384218|gb|ACU78788.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385050|gb|ACU79619.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455934|gb|ADH22169.1| arginine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 554

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 175/581 (30%), Positives = 299/581 (51%), Gaps = 45/581 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N LK I  K+ + K+     +IE  ++   G LS++  +I S+ +   PL +AE+    +
Sbjct: 11  NDLKNICQKLNITKE----PIIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +     ++ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAMMKII 245
           D+  PE  Y G   + + K + +KY+ +  +         ++    + K  S+   +KII
Sbjct: 185 DAKKPENCYAGDMYEDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++     +  +Y                  
Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLKLYESKDALYY----------------K 286

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
              L  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 287 DDALFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QAK              +
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTK-------KITPLI 459

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++       
Sbjct: 460 KQTNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------E 513

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +  N+ +LT +RL  + A+  ++ +   IIG++   EM
Sbjct: 514 IKIIDENDLQLTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554


>gi|332676510|gb|AEE73326.1| arginine--tRNA ligase [Propionibacterium acnes 266]
          Length = 556

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 9   AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 68

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 69  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 127

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 128 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLY 187

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 188 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 246

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 247 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 284

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 285 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 344

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 345 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 402

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 403 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 461

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 462 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 517

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 518 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556


>gi|15903931|ref|NP_359481.1| arginyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516539|ref|YP_817294.1| arginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148989896|ref|ZP_01821179.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148992079|ref|ZP_01821853.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168486894|ref|ZP_02711402.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168489140|ref|ZP_02713339.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168491605|ref|ZP_02715748.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168494168|ref|ZP_02718311.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221232790|ref|YP_002511944.1| arginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855567|ref|YP_002737079.1| arginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|38372520|sp|Q8DN69|SYR_STRR6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122277860|sp|Q04I94|SYR_STRP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782985|sp|B8ZPK2|SYR_STRPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782987|sp|C1CH08|SYR_STRZJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15459583|gb|AAL00692.1| Arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS)
           [Streptococcus pneumoniae R6]
 gi|116077115|gb|ABJ54835.1| arginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147924681|gb|EDK75766.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147929128|gb|EDK80139.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183570152|gb|EDT90680.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183572255|gb|EDT92783.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183574045|gb|EDT94573.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183575862|gb|EDT96390.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220675252|emb|CAR69843.1| arginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723848|gb|ACO19701.1| arginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|332071512|gb|EGI82005.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332198499|gb|EGJ12582.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 563

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|15901895|ref|NP_346499.1| arginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657149|ref|ZP_01407930.1| hypothetical protein SpneT_02001629 [Streptococcus pneumoniae
           TIGR4]
 gi|18279281|sp|Q54869|SYR_STRPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14973589|gb|AAK76139.1| arginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 563

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|187736645|ref|YP_001878757.1| arginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426697|gb|ACD05976.1| arginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 585

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 143/623 (22%), Positives = 243/623 (39%), Gaps = 76/623 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L + LK +  + ++      R  +    D   G   +NAAM+L++    +
Sbjct: 1   MTIPGILEEKLSSALKAVLGE-ELPADF--RASVTPSADLRFGDYQSNAAMVLAKRCRTN 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +  RI  D    S+ IAG GFIN  + P +    L +++      G   +   
Sbjct: 58  PRALAQQVADRIGQDAVC-SLEIAGPGFINFRIRPEFYAARLLAMLADD-RLGVEKVQAP 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I+F + N   PMHVGH R  ++GD L+ +  F G+ V  + +I D G Q   +   
Sbjct: 116 KTIVIDFSAPNVAKPMHVGHIRSTIIGDALSRVARFVGHHVITDNHIGDWGTQFGMILWG 175

Query: 181 VF-WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF--PEEKWLPIVKDY 236
                 +QAL  N  D     Y  V L      EL D   +EL+     + + L I K  
Sbjct: 176 WKNILDEQALAANPIDELLRVYKDVNLMCKEKPELLDTCKAELVKLQAGDGENLAIWKR- 234

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            V+     +      L+I  D ++ E  ++      +  ++D +   G   E       S
Sbjct: 235 CVEVSKSGLSKIYDQLDIHFDYWLGESFYN----DALAPLVDGMIAAGMARE-------S 283

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDV------DRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
                   D          +  D          + K+DG + Y   DLA    +    G 
Sbjct: 284 DGAICVFSDGSVPPNEDPFLVQDKGEWRANPCIIRKADGGFLYATTDLATLDHRIRTWGA 343

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D++ YV+G+  + + +++ +            ++    +  L  D  P K   R+GD ++
Sbjct: 344 DSIWYVVGAPQALHFRQIFSTQRRRGMDGDYRHIAFGSI--LGDDRKPFK--TRSGDTVS 399

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L+ V+DE                           VG  +V+F  L +       F++ K+
Sbjct: 400 LQDVLDEAIERAARVVEEKSPDMPDEEKKRVAEVVGIGAVKFAELSQNRMTDYVFNWDKM 459

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + +   Y+Q +Y R RSIFR+          D  P +        + +E+ L   L
Sbjct: 460 LAL-QGDTAPYLQNSYVRVRSIFRK---------LDGGPLDWSAPIQLSEDAEIHLARLL 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A Y  V+        P  LA YL+DLA  FH  +      P L+    +   +   RL L
Sbjct: 510 ARYGEVVPQVLDDCRPNVLAAYLFDLARAFHSFYEAC---PVLK----SEGPVRHSRLAL 562

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL ++G++ P+ M
Sbjct: 563 CELTARTLKHGLGLLGIQLPDRM 585


>gi|313808398|gb|EFS46865.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313818180|gb|EFS55894.1| arginyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821038|gb|EFS58752.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824084|gb|EFS61798.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313827170|gb|EFS64884.1| arginyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314927063|gb|EFS90894.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314961885|gb|EFT05986.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314979613|gb|EFT23707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314988349|gb|EFT32440.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990245|gb|EFT34336.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315083838|gb|EFT55814.1| arginyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087297|gb|EFT59273.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089715|gb|EFT61691.1| arginyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327326622|gb|EGE68410.1| arginine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327449559|gb|EGE96213.1| arginyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|328757404|gb|EGF71020.1| arginyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
          Length = 582

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     S + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 488 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 543

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 544 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|76787802|ref|YP_330632.1| arginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|109895042|sp|Q3JYM1|SYR_STRA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76562859|gb|ABA45443.1| arginyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 256/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    + + ++++   ++ +  IL   ++E P++ + G L+   A  L++ L   P  IA
Sbjct: 2   DTKHLIASEIQKVVPDME-QSTILS--LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  Y    IG+G  V 
Sbjct: 58  SDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +  D     Y  +  +       D+ + E     E    +   + + +  ++
Sbjct: 176 GNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDPEATELWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     +N+  D +  E  ++      + ++++ L  +  + E            
Sbjct: 236 LLEFNRL-YDKMNVTFDSYNGEAFYN----DKMEEVLELLESKNLLVES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++
Sbjct: 280 -----KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRRRTYDFAKSIYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 335 QSAHFKQLKAVLKEMDYDWSD-DMTHVPFGLVTKGGA--KLSTRKGNVILLEPTVAEAIN 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L    +   DFD   +     E    YV
Sbjct: 392 RAASQIEAKNPNLADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A     + D            S  D    ++I  + ++PR+I  A  
Sbjct: 451 QYAHARIQSILRKANFNPSNSD----------NYSLNDVESWEIIKLIQDFPRIIVRAAD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +  +LA  F+ +++H R       +   + +++  RL L +A A+++   L
Sbjct: 501 NFEPSIIAKFAINLAQCFNKYYAHTR-------ILDEDAEIS-SRLALCYATATVLKESL 552

Query: 575 NIIGVESPNEM 585
            ++GV++PNEM
Sbjct: 553 RLLGVDAPNEM 563


>gi|182685015|ref|YP_001836762.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303254068|ref|ZP_07340184.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259580|ref|ZP_07345556.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262025|ref|ZP_07347970.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264481|ref|ZP_07350400.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267396|ref|ZP_07353252.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269755|ref|ZP_07355506.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|229558813|sp|B2IMZ8|SYR_STRPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|182630349|gb|ACB91297.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802752|emb|CBW35524.1| arginyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598978|gb|EFL66008.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636665|gb|EFL67155.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639132|gb|EFL69591.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640702|gb|EFL71098.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643061|gb|EFL73352.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645851|gb|EFL76079.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTI 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETSGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|237736640|ref|ZP_04567121.1| arginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420502|gb|EEO35549.1| arginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 570

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 250/617 (40%), Gaps = 79/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M++       +    +E   K+  +K+ L +I I    +   G   TN AM+ S+ +G +
Sbjct: 1   MHI---IDKEIARIFEETVQKLYGDKE-LKKIEISVATNEKFGDFQTNFAMMNSKIIGNN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ IV  +  +  ++ + IAG GFIN++L   YL ++L        ++  + + + 
Sbjct: 57  PRAIAQEIVDNLVENSVIEKLEIAGPGFINIFLKSEYLGELLKKSREENYDF--SFLNRE 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I+F S N    MH+GH R  ++GD++A +  + GY V  + +I D G Q   L + 
Sbjct: 115 GDVVIDFSSPNIAKRMHIGHLRSTIIGDSIARIYRYLGYHVVADNHIGDWGTQFGKLIIG 174

Query: 181 V-FWRYQQALYNNDSDLPEGYYPG---VYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              W  ++A   N  +  E  Y        +H   E   +   + L   +E+   + K++
Sbjct: 175 YRRWLDREAYETNAIEELERVYVEFTKQSEEHPELEEEARLELKKLQDGDEENFALWKEF 234

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++ +  +     L++  D +  E  +H      I ++++                + 
Sbjct: 235 IKVSLDEYAKL-YGRLDVHFDTYYGESFYHDMMQGVIEELVEK-----------KIAVED 282

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
              +      +  LF            + K DG++ Y  +D+A  K + +    + +IY+
Sbjct: 283 DGAKVVFFPEEDNLF---------PCIVQKKDGAFLYSTSDIATVKFRKDNYNINKIIYL 333

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                  + K+   +   +     +    +   +  + DG+    S R G+ I L  ++D
Sbjct: 334 TDERQQDHFKQFFKITDMLGWNVPK--HHIWFGIMRFADGV---FSTRKGNVIRLEQLMD 388

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  ++++  L +     + F++ K+    + 
Sbjct: 389 EGKKRAYDIVNEKNPDLSFEEKDNIAEIVGVGAIKYADLSQNRQSPIIFEWDKILSF-EG 447

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QY+YAR +SI R+A+     +DF        PQ       E  L  H+A +P  
Sbjct: 448 NTAPYLQYSYARIQSILRKAESEGKGIDFTKTILVKTPQ-------ERALANHIAAFPMA 500

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A+   +P  +A YL++LA  F+  ++          +   +  L   R  L      
Sbjct: 501 VIKASETFKPNVIADYLFELAKKFNSFYNSC------PILNQEDEIL-FSRGLLAKVAGD 553

Query: 569 IINSGLNIIGVESPNEM 585
            I  GL+++G+++   M
Sbjct: 554 TIKDGLDLLGIKTLERM 570


>gi|26991765|ref|NP_747190.1| arginyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258317|sp|Q88CU1|SYR_PSEPK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24986874|gb|AAN70654.1|AE016709_6 arginyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 578

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 119/598 (19%), Positives = 236/598 (39%), Gaps = 69/598 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +    D+  V IAG GF+N + +   L   L + +      G    G   KV I+
Sbjct: 65  KLINALPASADISKVEIAGPGFLNFFQNTDALANRLDAALAD-AHLGARKAGPAQKVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G  V R+ ++ D G Q   L   +    +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDNVIRQNHVGDWGTQFGMLMAYLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   + + L +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPECLALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++      + +++ +L  +G + E        +  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----DDLANVVADLKAKGLLVE-------DQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             ++     F+++  GD +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLEE----FKNSD-GDPLPVIVQKADGGYLYATTDLAAVRYRSNVLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKM-------SKRA 404
           + +  ++  VA         + +       +          RDG  +K+        +RA
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMQMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAKERA 403

Query: 405 GDFITL----------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              +            RH+ + VG  +V++  L +  +    F+F  +    + N   Y+
Sbjct: 404 YALVKEKNPSLADDELRHIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            YAY R   +FR+    F ++D  +  +            E  L   LA++  ++ N   
Sbjct: 463 LYAYTRVAGVFRKLGKGFDEVDGKIVLQAA---------HEQDLAARLAQFGEILNNVAE 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              P+ L  YLYDLA +F   + +         + A        RL+L       +  
Sbjct: 514 KGTPHVLCSYLYDLAGLFSSFYENC------PILAAETPSQQQSRLRLAALTGRTLKQ 565


>gi|307710197|ref|ZP_07646641.1| arginyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619177|gb|EFN98309.1| arginyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 134/616 (21%), Positives = 248/616 (40%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASVIDSLDQEAILN-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  +I      + V   G  ++N +L  S +  ++L +++     Y    IGK
Sbjct: 53  PQMIAAELAEKIN-SQSFEKVVATGP-YVNFFLDKSAISAQVLQAVITEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +EK L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEKALSLWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+++G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSKKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSG-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDAESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R       +   N +    RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQAFNKYYAHTR-------ILDENAE-RDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|332071346|gb|EGI81840.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSTISAQVLQTVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|262039672|ref|ZP_06012961.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746289|gb|EEY33839.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 577

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 127/613 (20%), Positives = 247/613 (40%), Gaps = 75/613 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                 +  ++ I      ++   D+I I+       G   TN AM+ S+ LG +P  IA
Sbjct: 7   QLKKLFEKNIQNIF-----KEDFSDKIDIQNSTKKEFGDFQTNFAMVTSKILGKNPREIA 61

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             I+   + +  ++ + IAG GFIN+YL  S+L     +  +   +Y  + +     V I
Sbjct: 62  NEIIENFEKNDIIEKMEIAGPGFINIYLKNSFLDN--ETKKIGNEKYDFSFLDSDKTVII 119

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY-EVTREYYINDAGAQINTLALSV-FW 183
           ++ S N    MHVGH R  ++GD+L  ++ F G+ +V  + ++ D G Q   L +    W
Sbjct: 120 DYSSPNIAKRMHVGHLRSTIIGDSLKRILQFLGFKKVLGDNHVGDWGTQFGKLIVGYNLW 179

Query: 184 RYQQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             ++A   +  +  E  Y        K    E   +     L   +E    + +++ +  
Sbjct: 180 LNREAYEKDPIEELERIYVMFSDEAKKDPSLEDVAREELRKLQSGDEVNNALWREF-IDI 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K      K  +I  D +  E  ++      +  +++ L  +                 
Sbjct: 239 SIKEYNKIYKRFDITFDYYNGESFYN----DLMPVVLEELKEKN---------------- 278

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
               D   L+             + K DGS+ Y  +DLA  K + +    D  IYV+   
Sbjct: 279 IAKQDEDALVVFFGEDTKLHPCIVQKKDGSFLYSTSDLATIKYRKDNLDVDLAIYVVDER 338

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              + K++ ++A  +        V +   +  + +G  + +S R G+ I L  ++DE   
Sbjct: 339 QQDHFKQVFSIAKMIGAPYDYDKVHVWFGIMRFANG--VILSTRGGNVIRLIDLLDEAKK 396

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ ++++  L +  +  + FD+ KV    + N   
Sbjct: 397 HVKKVIDEKNPDIPEPEKEIIADIVGTGAIKYFDLSQNRTSPILFDWEKVLSF-EGNTGP 455

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QY Y R  SI R+ +     ++     +N           E +L V L  +P+V+  +
Sbjct: 456 YLQYTYVRIMSILRKMESENISIN-----KNGNIIFDNMQDVERELAVALLRFPQVVVKS 510

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             +  P  +A YL++LA +F+  ++          ++  N +    R+ L    A I+  
Sbjct: 511 YESYRPNVIADYLFELAKLFNNFYNSK------PILKEENAETMQARILLALKTAEILKQ 564

Query: 573 GLNIIGVESPNEM 585
           GL+++G+++ + M
Sbjct: 565 GLSLLGIQTVDRM 577


>gi|322392636|ref|ZP_08066096.1| arginine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144628|gb|EFX40029.1| arginine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 133/616 (21%), Positives = 245/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSVIDSLDQEAILN-------LLETPKNSDMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  + +  ++L +++     Y    IG 
Sbjct: 53  PQMIAADIAEKINGQA-FEKVVATGP-YVNFFLDKAAISGQVLQNVITEKEHYADQKIGN 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGNEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  +++ L  +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELQVEFDSYNGEAFYN----DKMDAVVEILENKGLLVES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +     Q +++      + RDG   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWNQ-DIVHVPFGLVTRDGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAISRAKAQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  D    ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPEAGANYSLNDDESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 KRAADNYEPSIIAKFAISLAQAFNKYYAHTRIL--------DKSPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|313771792|gb|EFS37758.1| arginyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313831656|gb|EFS69370.1| arginyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834810|gb|EFS72524.1| arginyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314975006|gb|EFT19101.1| arginyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314977897|gb|EFT21991.1| arginyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314984694|gb|EFT28786.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315095588|gb|EFT67564.1| arginyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327332886|gb|EGE74618.1| arginine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327447714|gb|EGE94368.1| arginyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448589|gb|EGE95243.1| arginyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328762012|gb|EGF75518.1| arginine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 582

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 129/584 (22%), Positives = 235/584 (40%), Gaps = 55/584 (9%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
             ++E  I     +        GH  +N A+ L++     P  +A  IVA++ I+   ++
Sbjct: 35  AARIESAIGVDPQLRPATKPQFGHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCET 94

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             IAG GFINL L    L ++ S +V      G     K  +V I++ + N    MHVGH
Sbjct: 95  PEIAGPGFINLRLRTDVLARVASDLVTD-PNAGIAQAEKPERVVIDYSAPNVAKQMHVGH 153

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  ++GD    +++  G+ V  + +I D G Q   L   +  +       + S + + Y
Sbjct: 154 LRSTIIGDCFNRVLSAQGHTVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLY 213

Query: 201 YPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QH 256
                      + AD+    ++     + + L I +   +   ++        L++    
Sbjct: 214 QDSKKTFDADPQFADRARRRVVKLQGGDAETLRIWRTL-IDISLEGFNATYARLSVLLTD 272

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +    E  ++      +  ++D L   G   E                D   L     + 
Sbjct: 273 EDVAGESSYN----DDLPRVVDELVADGLAVE----------------DNGALCV--FVE 310

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G D    + K DG + Y A DLA  + +  +   D +IYV     + + + L  VA    
Sbjct: 311 GQDAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQNHHFEVLFQVARMAG 370

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMM 426
                +    +   + L  DG P K   R G  ++L  ++DE        +   ++++  
Sbjct: 371 FLPDDVEAEHVGYGMVLGPDGRPFK--TREGGTVSLSDLLDEAETHAAPNIALAAIKYAD 428

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFP 481
           L     +   FD  ++  Q+  +   Y+QYA+AR   I R+A      ++ P+ D D   
Sbjct: 429 LSNGLQKDYVFDAERMV-QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMD 487

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              I    E   +E QL + L+ +  ++E       P+KL  YLY+LA  +   +     
Sbjct: 488 WGRISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYEQC-- 543

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LR    +  ++   RL L  A   ++  GL+++G+++P+ M
Sbjct: 544 -PVLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 582


>gi|260440708|ref|ZP_05794524.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 572

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 114/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + + +     +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHAALND-ARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L  +G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVVDDLVEKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R     ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL     + +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGNTLKQGLDLLGIDVLDVM 572


>gi|194398354|ref|YP_002038668.1| arginyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|229558811|sp|B5E387|SYR_STRP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|194358021|gb|ACF56469.1| arginyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 131/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIATELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  +   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQIAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|88809846|ref|ZP_01125352.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786230|gb|EAR17391.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 590

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 139/629 (22%), Positives = 236/629 (37%), Gaps = 92/629 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  L+  L++   +   E        +        G    N A+ L++PL   P  IA 
Sbjct: 4   IAQALETQLRDAMQRALPEADAGLDPQLVAASKPEFGDFQANGALPLAKPLKQAPRQIAT 63

Query: 67  LIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV +++ DP          IAG GFINL + P  L   +S+ +      G   +     
Sbjct: 64  AIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGD-ERLGVPAVVNEAP 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 123 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLK 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +AL   D+              +G +L   Y      F E++         V  + 
Sbjct: 183 QVAPEALETADA------------VDLG-DLVAFYREAKKRFDEDEAFQFTSREEVVKLQ 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQK 301
                 LKA  +  D         R +   I D +D  L+ +G  +     P      + 
Sbjct: 230 GGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKD 282

Query: 302 CDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-----ERGF 349
            ++    D  + +F   + G D   +   + KSDG + Y   DLA  + ++       G 
Sbjct: 283 AELLVTDDGAECVFLEGVQGKDGNPLPVIVRKSDGGFNYATTDLAAIRYRFGAVPDGDGA 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +IYV  +  + +   +  VA         A++  +   LV+   DG   K+  R+GD 
Sbjct: 343 RRVIYVTDAGQANHFAGVFQVATRAGWIPDGARLEHVPFGLVQ-GEDGK--KLKTRSGDT 399

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 400 VRLRDLLDEAVERAEADLRSRLKAEERSESEEFIHHVAATVGLAAVKYADLSQNRITNYQ 459

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+  D+               Q    +  E 
Sbjct: 460 FSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLEVS----------TAQLQFSEPQEW 508

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A +  L 
Sbjct: 509 ALVRELLKFDVVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKAESEAL- 561

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L    A  + +GL ++G+ S   M
Sbjct: 562 PSRLALCRLTADTLKAGLGLLGIPSLERM 590


>gi|149023774|ref|ZP_01836235.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147929570|gb|EDK80563.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 563

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAIKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|148984375|ref|ZP_01817663.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|149011935|ref|ZP_01833083.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168484413|ref|ZP_02709365.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|225857652|ref|YP_002739163.1| arginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225859835|ref|YP_002741345.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|237650275|ref|ZP_04524527.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822219|ref|ZP_04598064.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|307128340|ref|YP_003880371.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|254782984|sp|C1CAQ7|SYR_STRP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782988|sp|C1CN25|SYR_STRZP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147763890|gb|EDK70823.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147923152|gb|EDK74266.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|172042367|gb|EDT50413.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|225722109|gb|ACO17963.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225725656|gb|ACO21508.1| arginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|301795009|emb|CBW37473.1| arginyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|301800828|emb|CBW33483.1| arginyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|306485402|gb|ADM92271.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332198683|gb|EGJ12765.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332198891|gb|EGJ12972.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 563

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|225861897|ref|YP_002743406.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230662|ref|ZP_06964343.1| arginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254470|ref|ZP_06978056.1| arginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501578|ref|YP_003723518.1| arginine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254782989|sp|C1CTY4|SYR_STRZT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225727935|gb|ACO23786.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237173|gb|ADI68304.1| arginine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388815|gb|EGE87163.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 563

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|77405110|ref|ZP_00782209.1| arginyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410827|ref|ZP_00787184.1| arginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77163045|gb|EAO73999.1| arginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77176253|gb|EAO79023.1| arginyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 563

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 256/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    + + ++++   ++ +  IL   ++E P++ + G L+   A  L++ L   P  IA
Sbjct: 2   DTKHLIASEIQKVVPDME-QSTILS--LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  Y    IG+G  V 
Sbjct: 58  SDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +  D     Y  +  +       D+ + E     E    +   + + +  ++
Sbjct: 176 GNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDPEATELWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     +N+  D +  E  ++      + ++++ L  +  + E            
Sbjct: 236 LLEFNRL-YDKMNVTFDSYNGEAFYN----DKMEEVLELLESKNLLVES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++
Sbjct: 280 -----KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSIYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 335 QSAHFKQLKAVLKEMDYDWSD-DMTHVPFGLVTKGGA--KLSTRKGNVILLEPTVAEAIN 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L    +   DFD   +     E    YV
Sbjct: 392 RAASQIEAKNPNLADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A     + D            S  D    ++I  + ++PR+I  A  
Sbjct: 451 QYAHARIQSILRKANFNPSNSD----------NYSLNDVESWEIIKLIQDFPRIIVRAAD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +  +LA  F+ +++H R       +   + +++  RL L +A A+++   L
Sbjct: 501 NFEPSIIAKFAINLAQCFNKYYAHTR-------ILDEDAEIS-SRLALCYATATVLKESL 552

Query: 575 NIIGVESPNEM 585
            ++GV++PNEM
Sbjct: 553 RLLGVDAPNEM 563


>gi|319745997|gb|EFV98279.1| arginine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 574

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 256/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    + + ++++   ++ +  IL   ++E P++ + G L+   A  L++ L   P  IA
Sbjct: 13  DTKHLIASEIQKVVPDME-QSAILS--LLETPKNSSMGDLAF-PAFSLAKILRKAPQIIA 68

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  Y    IG+G  V 
Sbjct: 69  SDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVA 126

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G Q   L ++   W
Sbjct: 127 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKW 186

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +  D     Y  +  +       D+ + E     E    +   + + +  ++
Sbjct: 187 GNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDPEATELWQWFRDES 246

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     +N+  D +  E  ++      + ++++ L  +  + E            
Sbjct: 247 LLEFNRL-YDKMNVTFDSYNGEAFYN----DKMDEVLELLESKNLLVES----------- 290

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++
Sbjct: 291 -----KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSIYVVGNE 345

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 346 QSAHFKQLKAVLKEMDYDWSD-DMTHVPFGLVTKGGA--KLSTRKGNVILLEPTVAEAIN 402

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L    +   DFD   +     E    YV
Sbjct: 403 RAASQIEAKNPNLADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYV 461

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A     + D            S  D    ++I  + ++PR+I  A  
Sbjct: 462 QYAHARIQSILRKANFNPSNSD----------NYSLNDVESWEIIKLIQDFPRIIVRAAD 511

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +  +LA  F+ +++H R       +   + +++  RL L +A A+++   L
Sbjct: 512 NFEPSIIAKFAINLAQCFNKYYAHTR-------ILDEDAEIS-SRLALCYATATVLKESL 563

Query: 575 NIIGVESPNEM 585
            ++GV++PNEM
Sbjct: 564 RLLGVDAPNEM 574


>gi|237807247|ref|YP_002891687.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499508|gb|ACQ92101.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 580

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 126/598 (21%), Positives = 229/598 (38%), Gaps = 67/598 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     L+  +  +     +  ++  RI ++  +D AHG L+TN AM+L++P G +P 
Sbjct: 1   MKAQIQQLLEQTVSSLKAAALIPVELEPRIQVDNTKDKAHGDLATNLAMLLAKPAGKNPR 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A+LI+  +     V    IAG GFIN +L  ++L K + +I  S  +           
Sbjct: 61  ELAQLIIEHLPASTLVARAEIAGPGFINFFLDSAWLAKQIEAIAAS-PKAEVKAAAPAQT 119

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +++ + N    M V H R  V+GD +   M F G+ V R  +I D G Q   L     
Sbjct: 120 IVLDYSAPNVAKEMAVHHIRSTVIGDAVTRTMEFLGHHVIRANHIGDWGTQFGMLIA--- 176

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
             Y + + N  +   E      + +      A K+  E   F E     +VK        
Sbjct: 177 --YLEKVQNEQASELELSDLEAFYRE-----AKKHYDEDEVFAERARGYVVKLQGGDEYC 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +   L  + +  +  I    + R + S     +   +    +   ++   ++K     
Sbjct: 230 RAMWKKLVDITMAQNQII----YDRLNVSLSEKDVMGESLYNPMLRTVVEDLQAKGLA-V 284

Query: 303 DMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           + +   +++   + G D   +   + K DG + Y   D+A  K + E    D ++Y + S
Sbjct: 285 ESEGALVVYLDEIKGKDGEAMAVIIQKRDGGFLYATTDIACAKYRVETLKADRVLYFIDS 344

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
               ++++   +A        Q+++      + L +DG P K   R G  + L  ++DE 
Sbjct: 345 RQHQHLQQAWMIARKAGYVPEQVSLEHHAFGMMLGKDGKPFK--TRTGGTVKLSELLDEA 402

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     V   +V++  L +  +    FD+  +    + N 
Sbjct: 403 ELRAGALIAEKSADLPEAEKAKVIHAVAMGAVKYADLSKNRTTDYIFDWDNML-TFEGNT 461

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R +SIFR+  D        +              +E  L   L ++  V+ 
Sbjct: 462 APYLQYAYTRIQSIFRRVGDEAQPGPVQITA-----------PAEETLAQKLLQFNDVVH 510

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           N      P+ L  YLY+L+  F   +     N      +         RL L  A A 
Sbjct: 511 NVAQKGMPHLLCTYLYELSGCFMSFYEACPINK-----EGVTAAEKGSRLTLCQATAK 563


>gi|327479212|gb|AEA82522.1| arginyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 579

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 125/599 (20%), Positives = 231/599 (38%), Gaps = 70/599 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + K +   I +E  +D +HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRHLIQQALVRLTSEGVLPKGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGMKPRELAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + +   L + L + +    +   +      +V I+
Sbjct: 65  KLIAALPQDAQVSKVEIAGPGFLNFFQNSDALAQRLETALAD-AQLAVHKASAKQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +  ++ F G EV R+ ++ D G Q   L L+      
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVIRQNHVGDWGTQFGML-LAYLEEKP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A  +  +DL + Y           E AD+    ++     + + L +   ++  + +  
Sbjct: 183 AAAESELADLEQFYRAAKQRFDESPEFADRARELVVKLQAGDAQCLSLWTRFNDIS-LSH 241

Query: 245 IRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     LN++        E  ++    + + DI++ L  +G + E           Q  
Sbjct: 242 CQKIYDRLNVKLTPADVKGESAYN----ADLADIVEALREKGLLTE-------DNGAQCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHS 361
            +D  +        G+ +   + K+ G Y Y   DLA  + +  +   D ++Y +    +
Sbjct: 291 FLDEFK-----NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +    VA         + +       +   DG P K   R G  + L  ++DE    
Sbjct: 346 LHFQMAFEVARRAGFVHEGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEQR 403

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    F+F  +    + N   Y
Sbjct: 404 AYALVKGKNPELEEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELMLSF-EGNTAPY 462

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R  S+FR+      ++                   EL L   LA++  V+ +  
Sbjct: 463 LLYAYTRVASVFRKLGKGIDEISG---------HIQLDAEQELALAAKLAQFGEVLNSVG 513

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              EP+ L  YLYDLA +F   + H         + A        RL+L       +  
Sbjct: 514 EKGEPHLLCAYLYDLAGLFSSFYEHC------PILSAEQDAQKQSRLRLAALTGRTLKQ 566


>gi|167468376|ref|ZP_02333080.1| arginyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 532

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 120/578 (20%), Positives = 225/578 (38%), Gaps = 89/578 (15%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M +++ LG+ P  +AE +V  + +      + IAG GFIN++L   ++ + +   + +  
Sbjct: 1   MAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPK 60

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
                   +   + +++ + N    MHVGH R  ++GD     +AF G+ V R  ++ D 
Sbjct: 61  LGV--APVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDW 118

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G Q   L       Y + + N ++        G+    +  + A K   E   F      
Sbjct: 119 GTQFGMLIA-----YLEKMQNENAS-----DMGLSDLELFYQQAKKTYDEDEEFALRARA 168

Query: 231 PIVK-----DYSVQAMMKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDI 276
            +VK     +Y  Q   K++   +    + +D           + E  ++   P    +I
Sbjct: 169 YVVKLQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLP----EI 224

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           + +L  +G   E       S+      +D  +        G+ +   + K DG Y Y   
Sbjct: 225 VADLKAKGLAVE-------SEGATVVYLDEYK-----NKDGEPMGVIIQKKDGGYLYTTT 272

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRD 394
           D+A  K +YE  G D ++Y + S    ++ +   +          + +      + L +D
Sbjct: 273 DIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKD 332

Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMML 427
           G P K   R+G  + L  ++DE                           VG  +V++  L
Sbjct: 333 GKPFK--TRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADL 390

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +  +    FD+  +      N   Y+QYAY R  S+FR+A      +D       ++  
Sbjct: 391 SKSRTTDYIFDWDNMLALD-GNTAPYMQYAYTRVVSVFRRAG-----VDETSLTLPLVVT 444

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           E      E  L   L ++  +I        P+ +  YLYDLA +F   + H +       
Sbjct: 445 E----DREATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------I 494

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A + ++   RL+L    A  +  GL+ +G+++   M
Sbjct: 495 LNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 532


>gi|77456627|ref|YP_346132.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|109895021|sp|Q3KJB3|SYR_PSEPF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77380630|gb|ABA72143.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 578

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 124/600 (20%), Positives = 233/600 (38%), Gaps = 73/600 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVNEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A +  D +V    IAG GFIN + +   L   L + +      G    G   +  ++
Sbjct: 65  KIIAALPADENVTKAEIAGPGFINFFQNTQALASRLDAALAD-AHVGVRKAGPAQRTVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L    + +  
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDWGTQFGMLM--AYLQEN 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIV---KDYSVQAM 241
               +  SDL   Y           E AD+    ++     + + L +    KD S+   
Sbjct: 182 PITSDELSDLENFYRAAKQRFDESPEFADRARGLVVKLQAGDAECLALWTKFKDISLSHC 241

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            KI   +L  + +     + E  ++      + +++++L   G + E       S   Q 
Sbjct: 242 QKIY--ELLNVKLTMADVMGESAYN----DDLINVVNDLKAAGMLVE-------SNGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
             +D  +        G+ +   ++K+DG Y Y   DLA  + +  +   D  +Y +    
Sbjct: 289 VFLDEFK-----NAEGEPLPVIIVKADGGYLYATTDLAAVRYRSGKLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--- 416
           + + +++ AVA         + +       +   DG P K   R G  + L  ++ E   
Sbjct: 344 ALHFQQVFAVARKAGFVTHPMEMEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLTEAQE 401

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    F+F ++    + N   
Sbjct: 402 RAYALVKEKNPTLADDELRSIAKVVGIGAVKYADLSKHRTSDYSFNFDQMLNL-EGNTAP 460

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R   +FR+ +  + ++D  +               E  L   LA++  V+ N 
Sbjct: 461 YLLYAYTRVAGVFRKLEKEYSEVDGQIVLEA---------PQEHDLAAKLAQFGEVLNNV 511

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLY++A +F   +           + A        RL+L       +  
Sbjct: 512 AEKGTPHTLCTYLYEVAGLFSSFYEKC------PILTAETPAQMQSRLRLAALTGRTLKQ 565


>gi|22538237|ref|NP_689088.1| arginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798536|ref|ZP_00780769.1| arginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414025|ref|ZP_00790196.1| arginyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|38372522|sp|Q8DWV9|SYR_STRA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22535150|gb|AAN00961.1|AE014287_1 arginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586100|gb|EAO62625.1| arginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159907|gb|EAO71047.1| arginyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 563

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 256/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    + + ++++   ++ +  IL   ++E P++ + G L+   A  L++ L   P  IA
Sbjct: 2   DTKHLIASEIQKVVPDME-QSTILS--LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  Y    IG+G  V 
Sbjct: 58  SDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +  D     Y  +  +       D+ + E     E    +   + + +  ++
Sbjct: 176 GNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDPEATELWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     +N+  D +  E  ++      + ++++ L  +  + E            
Sbjct: 236 LLEFNRL-YDQMNVTFDSYNGEAFYN----DKMDEVLELLESKNLLVES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++
Sbjct: 280 -----KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSIYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 335 QSAHFKQLKAVLKEMDYDWSD-DMTHVPFGLVTKGGA--KLSTRKGNVILLEPTVAEAIN 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L    +   DFD   +     E    YV
Sbjct: 392 RAASQIEAKNPNLADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A     + D            S  D    ++I  + ++PR+I  A  
Sbjct: 451 QYAHARIQSILRKANFSPSNSD----------NYSLNDVESWEIIKLIQDFPRIIVRAAD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +  +LA  F+ +++H R       +   + +++  RL L +A A+++   L
Sbjct: 501 NFEPSIIAKFAINLAQCFNKYYAHTR-------ILDEDAEIS-SRLALCYATATVLKESL 552

Query: 575 NIIGVESPNEM 585
            ++GV++PNEM
Sbjct: 553 RLLGVDAPNEM 563


>gi|109897684|ref|YP_660939.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064815|sp|Q15W53|SYR_PSEA6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109699965|gb|ABG39885.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 578

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 239/619 (38%), Gaps = 75/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     ++ +  L  I               + R      G    N AM L++ L   
Sbjct: 1   MNLHTLLLNKFRTALVAIGAPENSPAP------LSRATKVGFGDYQFNGAMALAKVLKQK 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  +++D   + + +AG GFIN+YLS  +L   LS           +   K 
Sbjct: 55  PRDIAEKIVEAVELDGIAEKLEVAGPGFINIYLSKEWLAAQLSHAAADPRLNIESQPTK- 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G++V R+ ++ D G Q   L   
Sbjct: 114 -TVVVDYSSPNLAKEMHVGHLRTTIIGDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAH 172

Query: 181 VFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  + +  Q      SDL E +Y    ++            E   F +     +VK    
Sbjct: 173 LNDKLESNQVAETALSDL-EDFYREAKVRF----------DEEEGFADRAREYVVKLQGG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +    +  +   ++I H    SE+ +H+ + S  RD I   +   +    ++   ++K 
Sbjct: 222 DSHCLALWQNFIDVSITH----SEEVYHKLNVSLTRDDIMGESAYNHDLANVVSELQAKG 277

Query: 299 TQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
               +    Q++F    +   G+     + KS G Y Y   DLA  + +  +   D  + 
Sbjct: 278 LA-VESQGAQVVFLPELADKEGNPAAYIVQKSGGGYLYATTDLAAIRHRNKQLHADRTLI 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHV 413
           +  +  + + K+ E VA      + +     C   + L  DG P K   R G  + L  +
Sbjct: 337 LTDARQALHFKQTELVARKAGFIEPEQTYEHCPFGMMLGNDGRPFK--TRTGGTVKLVEL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           +G  +V++  L +  +    F +  +    
Sbjct: 395 LDEAVERAETLLSKRETDLSSDELKVLANKIGIGAVKYADLSKNRTTDYMFSWDSMLSF- 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIFR+A      L+  +         S     E  L V   +Y 
Sbjct: 454 EGNTAPYLQYAYTRVMSIFRKAGVDHQTLNAPI---------SLDAPQEKILAVKQLQYV 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I        P+ L  YLY+LAS+F   +      P L+     +  +   R+ L    
Sbjct: 505 EAINQVIAEGTPHVLCTYLYELASLFMSFYEAC---PMLKDGIEQD--VRDSRMTLAALT 559

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  + SGL+++G+++   M
Sbjct: 560 AKTLQSGLSLLGIDTMERM 578


>gi|25012094|ref|NP_736489.1| arginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|38372523|sp|Q8E2R1|SYR_STRA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24413638|emb|CAD47715.1| arginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 563

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 256/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    + + ++++   ++ +  IL   ++E P++ + G L+   A  L++ L   P  IA
Sbjct: 2   DTKHLIASEIQKVVPDME-QSTILS--LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  Y    IG+G  V 
Sbjct: 58  SDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +  D     Y  +  +       D+ + E     E    +   + + +  ++
Sbjct: 176 GNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDPEATELWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     +N+  D +  E  ++      + ++++ L  +  + E            
Sbjct: 236 LLEFNRL-YDQMNVTFDSYNGEAFYN----DKMDEVLELLESKNLLVES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++
Sbjct: 280 -----KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSIYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 335 QSAHFKQLKAVLKEMDYDWSD-DMTHVPFGLVTKGGA--KLSTRKGNVILLEPTVAEAIN 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L    +   DFD   +     E    YV
Sbjct: 392 RAASQIEAKNPNLADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A     + D            S  D    ++I  + ++PR+I  A  
Sbjct: 451 QYAHARIQSILRKANFNPSNSD----------NYSLNDVESWEIIKLIQDFPRIIVRAAD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +  +LA  F+ +++H R       +   + +++  RL L +A A+++   L
Sbjct: 501 NFEPSIIAKFAINLAQCFNKYYAHTR-------ILDEDAEIS-SRLALCYATATVLKESL 552

Query: 575 NIIGVESPNEM 585
            ++GV++PNEM
Sbjct: 553 RLLGVDAPNEM 563


>gi|150389500|ref|YP_001319549.1| arginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|226701371|sp|A6TNX2|SYR_ALKMQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149949362|gb|ABR47890.1| arginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 566

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 120/610 (19%), Positives = 249/610 (40%), Gaps = 72/610 (11%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            +DF  ++   L     +   ++++L+  +IE P +   G  +      L++     P  
Sbjct: 1   MSDFKQKVSELLGT-QIEGIGQRELLE--MIEVPPNSEMGDFAFP-CFRLAKTFRKAPQV 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE +VA+I++  D + V   G G++N +++ + Y + ++  ++  G +YG   +G+G  
Sbjct: 57  IAEELVAKIQLTDDFEKVDNTG-GYLNFFVNRNTYAKAVIQEVLSKGDQYGSRNLGEGKN 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I++ + N   P HVGH R  V+G++L  +  F GY      ++ D G Q   + ++  
Sbjct: 116 ICIDYSAPNVAKPFHVGHLRSTVIGNSLYRIYDFLGYNCIGINHLGDWGTQFGKVIVAYK 175

Query: 183 -WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFP--EEKWLPIVKDYSV 238
            W  +  +     +     Y   + +     +L D+           +E+ L + K +S 
Sbjct: 176 NWGDKAEIEKEPINTLLALYVKFHDEAEKNPDLEDEARGWFTKMEKGDEEALSLWKWFSS 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + + K ++     L++  D +  E  ++      +  +ID L +Q  + E       S+ 
Sbjct: 236 ETI-KELKKIYALLDVHFDHYSGESFYN----DKMDVVIDELNKQNLLKE-------SQG 283

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
               D++   +              + K DGS  Y   D+A    +     F+  +YV  
Sbjct: 284 ANIVDLEEYNM----------PPCLVQKKDGSTLYATRDIAAAIYRKNTFNFEKCLYVTD 333

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQI----------------------NVLLCELVRLYRDG 395
              + +  +   V   +    A+                        VLL E++    + 
Sbjct: 334 YSQNLHFAQWFKVIELMGYDWAKDIEHISFGRVTHEGRRIQSRKGSVVLLEEVLNGAVER 393

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
           +   + ++  +      V  +VG  ++ F  L     + + F +        E    YVQ
Sbjct: 394 ISEIIEEKNPNVENKEQVAKDVGIGAIVFNDLSNNRIKDISFSWDTAFSFEGE-TGPYVQ 452

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  S+ R+A+    D          I      D   + +I  + ++P+VI +A   
Sbjct: 453 YTHARASSVLRKAEVAITD---------HINAAHLTDDVTMNVIKTIEQFPQVIVDAQRK 503

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +  ++ ++A  F+  +           +   + +L M RL +V AV  +++ GL+
Sbjct: 504 NEPSIITRHIVNIAQAFNRFYHDH-------PILVEDEELKMARLAVVQAVKQVLSVGLS 556

Query: 576 IIGVESPNEM 585
           +IG+++P +M
Sbjct: 557 LIGIKAPEKM 566


>gi|240112733|ref|ZP_04727223.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268598798|ref|ZP_06132965.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268582929|gb|EEZ47605.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 572

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 115/587 (19%), Positives = 235/587 (40%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + + +     +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHAALND-ARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ + D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVADDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRVGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL     + +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGNTLKQGLDLLGIDVLDVM 572


>gi|87123553|ref|ZP_01079404.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86169273|gb|EAQ70529.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 605

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 136/632 (21%), Positives = 232/632 (36%), Gaps = 87/632 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIV---IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             ++L+  +         + +   R +   +        G    N A+ L++PL   P  
Sbjct: 8   LDTQLRGAMDRAFPDAAAQAREAGRPLDPQLAPANKPEFGDFQANGALPLAKPLKQAPRQ 67

Query: 64  IAELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           IA  IV +++ DP          IAG GFINL L P  L   ++  +      G   +  
Sbjct: 68  IASAIVEQLQADPSFSALCLEPVIAGPGFINLTLRPERLAAEVAERLGD-PRLGVPAVQG 126

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L  
Sbjct: 127 SAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLIT 186

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +     +AL   D+              +G +L   Y      F +++         V 
Sbjct: 187 HLKQVAPEALDTADA------------VDLG-DLVAFYREAKKRFDDDEAFQTTSREEVV 233

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN-LARQGYVY-----EGILPP 293
            +       LKA  +  D         R +   I D +D  L+ +G  +     EG++  
Sbjct: 234 KLQGGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIHLSERGESFYNPYLEGVVTD 286

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-----E 346
            ++      D   + +        D    P++  KSDG + Y   DLA  + ++      
Sbjct: 287 LEAAGLLAVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGGAPDG 346

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRA 404
            G   +IYV  +  + +   +  VA          ++  +   LV+   DG   K+  RA
Sbjct: 347 DGARRVIYVTDAGQANHFAGVFQVARRAGWVPDDGRLEHVPFGLVQ-GDDGK--KLKTRA 403

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           GD + LR ++DE                               VG  +V++  L +    
Sbjct: 404 GDTVRLRDLLDEAVERAEADLRRRLEEEGRSEDEAFIQHVATTVGLAAVKYADLSQNRIT 463

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F ++    + N   Y+ YA  R   I R+  D+                 +E   
Sbjct: 464 NYQFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLALAGAGAAAGSGSDLHFNE--P 520

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E  L+  L  +  VI        P +L  YL++L+ VF+  +       ++  ++A   
Sbjct: 521 QEWALVRELLRFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYD------QVPVLKAEGA 574

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L   RL L    A  +  GL ++G+ +   M
Sbjct: 575 TLR-SRLALCRLTADTLKCGLGLLGIATLERM 605


>gi|148243340|ref|YP_001228497.1| arginyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166228634|sp|A5GW85|SYR_SYNR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147851650|emb|CAK29144.1| Arginyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 590

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/625 (21%), Positives = 225/625 (36%), Gaps = 84/625 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  L+  L+    +   E        +        G    N A+ L++PL   P  IA 
Sbjct: 4   IAQTLEAQLRAAMQQAFPEADGELNPALGPASKPEFGDFQANGALALAKPLKQAPRQIAA 63

Query: 67  LIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV +++ +P+     ++  IAG GFIN+ L PS L   +   +         +      
Sbjct: 64  AIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGDPRLGVAAVEQAEAP 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD LA ++ F G++V R  ++ D G Q   L   + 
Sbjct: 124 VIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDWGTQFGMLITHLK 183

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +AL   D+              +G +L   Y      F +++         V  + 
Sbjct: 184 QVAPEALNTADA------------IDLG-DLVAFYREAKKRFDDDEAFQTTSREEVVKLQ 230

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEG-----ILPPPKS 296
                 LKA  +  D         R +   I D +D  L  +G  +       ++   +S
Sbjct: 231 GGDATSLKAWGLLCDQ-------SRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRS 283

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY---ERGFDN 351
                 D     +     +  +    PL+  KSDG + Y   DLA  + +      G   
Sbjct: 284 SGLLVTDEGAGCVFLEGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGR 343

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV  +  + +   +  VA       A  ++       L +     K+  RAGD + L+
Sbjct: 344 VIYVTDAGQAAHFAGVFQVAKRAGWVPAAASLEHVPFG-LVQGDDGKKLKTRAGDTVRLK 402

Query: 412 HVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
            ++DE                               VG  +V++  L         F F 
Sbjct: 403 DLLDEAVERAQADLRRRLEEEERQESESFIDQVATTVGLAAVKYADLSTNRITNYQFSFE 462

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++   +  N   Y+ YA  R   I R+   +  +L   L            +  E  LI 
Sbjct: 463 RMLALT-GNTAPYLLYAVVRISGIARKGGALDGELPERLVFE---------EPQEWALIR 512

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L +   VI        P +L  YL++L+  F+  +    + P L+     +  +   RL
Sbjct: 513 QLLQLDAVISEVESDLLPNRLCTYLFELSQSFNRFYD---QVPVLK----ADEPMRSSRL 565

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L    A  +  GL+++G+ S   M
Sbjct: 566 ALCRLAADTLKLGLSLLGIPSLERM 590


>gi|229587962|ref|YP_002870081.1| arginyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511653|sp|C3KAH3|SYR_PSEFS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229359828|emb|CAY46678.1| arginyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 578

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 123/599 (20%), Positives = 240/599 (40%), Gaps = 71/599 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++  +  + + +   I +E  RD  HG  ++N AM+LS+P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVNEGVLPEGLTPAIQVENTRDKTHGDFASNIAMMLSKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A + +D  V    IAG GFIN + +   L   L + +      G    G   +  ++
Sbjct: 65  KIIAALPVDDSVTKAEIAGPGFINFFQNTQALAGRLDAALAD-ARVGVRKAGPAQRTVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A ++ F G EV R+ ++ D G Q   L   +    +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDEVVRQNHVGDWGTQFGMLMAYLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIV---KDYSVQA 240
             + +++    E +Y     +    E     +  L   L   + + L +    KD S+  
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEAFADRARGLVVKLQAGDAECLALWTKFKDISLSH 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             KI   +L  + +     + E  ++      + +++++L   G + E       S   Q
Sbjct: 241 CQKIY--ELLNVKLTMADVMGESAYN----DDLINVVNDLKAAGMLVE-------SNGAQ 287

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              +D  +        G+ +   ++K+DG Y Y   DLA  + +      D  +Y +   
Sbjct: 288 CVFLDEFK-----NADGEPLPVIIVKADGGYLYATTDLAAVRYRSGTLKADRALYFVDQR 342

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKM-------SKR 403
            + + +++ AVA         +++       +          RDG  +K+        +R
Sbjct: 343 QALHFQQVFAVARKAGFVTHPMDMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQER 402

Query: 404 AGDFITL----------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           A   +            R++   VG  +V++  L +  +    F+F  +    + N   Y
Sbjct: 403 AYTLVKEKNPELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFDLMLNF-EGNTAPY 461

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R   +FR+    F +++          Q     + E +L   LA++  V+ +  
Sbjct: 462 LLYAYTRVAGVFRKLGKDFSEVEG---------QIDLQASHEQELAAKLAQFGEVLNSVG 512

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               P+ L  YLY++A +F   + +         + A++      RL+L       +  
Sbjct: 513 EKGTPHILCTYLYEVAGLFSSFYENC------PILTADDEAQKQSRLRLAALAGRTLKQ 565


>gi|169833567|ref|YP_001695442.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|229558812|sp|B1I9E7|SYR_STRPI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|168996069|gb|ACA36681.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 563

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 132/616 (21%), Positives = 246/616 (39%), Gaps = 84/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSTISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+  S N   P  +GH R  V+GD+L+ +    GY+  +  ++ D G Q   L +
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKIGYQTVKVNHLGDWGKQFGMLIV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
           +   W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L + + 
Sbjct: 171 AYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALALWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E       
Sbjct: 231 FRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES------ 279

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                         +      G +    + KSDG+  Y   DLA    +  E  F   IY
Sbjct: 280 ----------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAKSIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
           V+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I      
Sbjct: 330 VVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTV 386

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +++F  L    +   DFD   +     E 
Sbjct: 387 AEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE- 445

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F        S  DT   ++I  + ++PR+I
Sbjct: 446 TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFPRII 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP  +A +   LA  F+ +++H R          +       RL L +A A +
Sbjct: 496 NRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATAVV 547

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 548 LKEALRLLGVEAPEKM 563


>gi|33864335|ref|NP_895895.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|39932085|sp|Q7V493|SYR_PROMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33641115|emb|CAE22244.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 612

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 140/637 (21%), Positives = 237/637 (37%), Gaps = 99/637 (15%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           +   + +     E     +     LD   +        G    NAA+ L++PL   P  I
Sbjct: 19  SQLRAAIDRAFPEAAASARESGTGLD-PQLAPASKPEFGDFQANAALPLAKPLKQPPRQI 77

Query: 65  AELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEY-----GRN 115
           A  IV ++ +D    ++     IAG GFINL + P  L   + + +           G N
Sbjct: 78  AAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECLAAEVQARLADARLGVPLVEGDN 137

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              + T V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q  
Sbjct: 138 DGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFG 197

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L   +     +AL   D+              +G +L   Y      F +++       
Sbjct: 198 MLITHLKQVAPEALETADA------------VDLG-DLVVFYRQAKQRFDDDEAFQTTSR 244

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPP 294
             V  +       LKA ++  D         R +   I D +D  L  +G  +       
Sbjct: 245 EEVVKLQGGDPISLKAWSLLCDQ-------SRREFQKIYDRLDVRLNERGESFYNAYLES 297

Query: 295 KSKTTQKCDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-- 345
             +      +    D  Q +F   + G D   +   + KSDG + Y   DLA  + ++  
Sbjct: 298 VVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFAA 357

Query: 346 ---ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKM 400
                G   +IYV  +  + +   +  VA          ++  +   LV+   DG   K+
Sbjct: 358 PPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWIPDAGRLQHVPFGLVQ-GEDGK--KL 414

Query: 401 SKRAGDFITLRHVVDE-------------------------------VGSDSVRFMMLWR 429
             RAGD + LR ++DE                               VG  +V++  L +
Sbjct: 415 KTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYADLSQ 474

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                  F F ++    + N   Y+ YA  R   I R+  D            +V   E 
Sbjct: 475 NRITNYQFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGD-----------LDVTTAEL 522

Query: 490 EF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +F +T E  L+  L ++  VI        P +L  YL++L+ VF+  +       ++  +
Sbjct: 523 QFSETQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYD------QVPVL 576

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +A        RL L    A  +  GL+++G+ +   M
Sbjct: 577 KAEQPS-RSCRLALCRLTADTLKLGLSLLGIPTLERM 612


>gi|148240672|ref|YP_001226059.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166232850|sp|A5GP97|SYR_SYNPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|147849211|emb|CAK24762.1| Arginyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 597

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 141/630 (22%), Positives = 238/630 (37%), Gaps = 93/630 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
              + +     E     +   + LD   +        G    N A+ L++PL   P  IA
Sbjct: 11  QLRAAMDRAFPEQAAAARQASQPLD-PQLAPASKPEFGDFQANGALALAKPLKQAPRQIA 69

Query: 66  ELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IVA+++ DP          IAG GFINL + P  L   +S+ +      G   + +  
Sbjct: 70  TAIVAQLQADPAFTDLCLEPQIAGPGFINLTVRPERLAAEVSARLGDQ-RLGVPAVEQAA 128

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   +
Sbjct: 129 PVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHL 188

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                 AL   D+              +G +L   Y      F +++         V  +
Sbjct: 189 KQVAPDALDTADA------------VDLG-DLVAFYREAKKRFDDDEAFQTTSREEVVKL 235

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQ 300
                  LKA  +  D         R +   I D +D  L  +G  +     P      +
Sbjct: 236 QGGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLNERGESFYNPFLPAVIDGLK 288

Query: 301 KCDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYERGFD--- 350
             ++    D  Q +F   + G D   +   + KSDG + Y   DLA  + ++    D   
Sbjct: 289 DAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDD 348

Query: 351 --NMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              +IYV  +  + +   +  VA       + A++  +   LV+   DG   K+  RAGD
Sbjct: 349 ARRVIYVTDAGQANHFAGVFQVAQRAGWIPEGARLEHVPFGLVQ-GEDGK--KLKTRAGD 405

Query: 407 FITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELL 435
            + LR ++DE                               VG  +V++  L +      
Sbjct: 406 TVRLRDLLDEAVERAETDLRSRLNEEERSESEEFIQHVAGTVGLAAVKYADLSQNRITNY 465

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F F ++    + N   Y+ YA  R   I R+  D+            +  Q    +  E
Sbjct: 466 QFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLEV----------LTGQLQFSEPQE 514

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A+   L
Sbjct: 515 WALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKADAEAL 568

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L    A  + SGL ++G+ + + M
Sbjct: 569 -PSRLALCRLTADTLKSGLGLLGIPTLDRM 597


>gi|291230340|ref|XP_002735133.1| PREDICTED: Arginyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 666

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 139/623 (22%), Positives = 248/623 (39%), Gaps = 78/623 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG---- 58
           L  D +S  +  +K    ++         I I        G    N+AM +S+ L     
Sbjct: 82  LLVDLNSVFEGAIKAAAPELADPP-----IAISLSTAEKFGEYQCNSAMGISQQLKGLGI 136

Query: 59  -LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
              P  IAE IV  +     ++ V IAG GFIN++L+ S++   L+ ++V G+      I
Sbjct: 137 KKSPREIAETIVKGLPPSEMIEKVEIAGPGFINIHLTKSFVSHKLNELLVIGVRPP--PI 194

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G+  +V ++  S N    MHVGH R  ++GD+++ L  F G++V R  +I D G Q   L
Sbjct: 195 GRKKRVVVDMSSPNIAKEMHVGHLRSTIIGDSISRLYEFLGHDVLRLNHIGDWGTQFGML 254

Query: 178 ALSVFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              +  ++    A      DL + +Y    ++   +E   K +  L+   + K   I K 
Sbjct: 255 IAHLMDKFPNYVAESPPIGDL-QDFYKESKIRFDNEEEFKKRAYSLVVKLQAKEPDITK- 312

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +   +  + R + + +  + DI I E    F++     + D +  L  +G V       
Sbjct: 313 -AWNLICDVSRREFQKIYDRLDIKIVERGESFYQ---DMMGDTVRALEAKGVVEVD---- 364

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNM 352
                      D ++++F   + G DV   ++KSDG  TY  +D+A      ++   D +
Sbjct: 365 -----------DGRKVVF---VPGHDVPLTVVKSDGGNTYDTSDMAALHHRLFDEHADVI 410

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +YV+ +    +   + A    V         +      +       K   R+G+ I L  
Sbjct: 411 LYVVDAGQGLHFNLIFAAGKLVGWYDPSSTRVEHIGFGVVLGEDKKKFKTRSGETIRLAD 470

Query: 413 VVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +++E                             V    +++  L         F F K+ 
Sbjct: 471 LLEEGLKRSLQKLKDKNRHEILTAEELKAAQESVAYGCIKYSDLSHNRVNDYVFSFDKML 530

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502
           +  K N   Y+ YA+ R RSI R A     ++D D   +       + D   E +L   L
Sbjct: 531 D-DKGNTAAYLLYAFTRIRSIARLA-----NIDRDTLKKAAETTAVDLDHPKEWKLGKCL 584

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
              P ++         + L  YLY++++ F   + H     + R  +    K+ M RL L
Sbjct: 585 LRLPDILLRVLDDLCMHTLCDYLYEISTTFTEFYDHCYCVEKDRQTK-EIIKVNMSRLLL 643

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A A+++  G +I+G+    +M
Sbjct: 644 CEATANVMECGFSILGINPVEKM 666


>gi|192359863|ref|YP_001982872.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692459|sp|B3PKE3|SYR_CELJU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190686028|gb|ACE83706.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 579

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 123/615 (20%), Positives = 244/615 (39%), Gaps = 66/615 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    + R+   +        +   I         +    G    N AM  ++ +G +
Sbjct: 1   MNIRDLLNQRVLAAMATCGVPADLPALIAPG------KKAGFGDYQANGAMGAAKAMGTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  IVA + ++   D + IAG GFIN+YL P++L K + ++  +            
Sbjct: 55  PRDLAGKIVAALDLEGIADKLEIAGPGFINIYLKPAWLGKQI-ALAQTDARLAVPQAEHA 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++   N    MHVGH R  ++GD+LA L+ F G++V R+ ++ D G Q   L   
Sbjct: 114 QTVVIDYSGPNLAKEMHVGHLRSTIIGDSLARLLEFLGHQVIRQNHVGDWGTQFGMLIAE 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +Q     D+ L       +    V  + A K+  +   F ++    +V+     A
Sbjct: 174 L---EEQLGAKGDAAL------ELKDLEVFYQQAKKHFDDDAAFADKARDYVVRLQGGDA 224

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            M  +    K +++ H    S + + + + +     +   +        ++   + +   
Sbjct: 225 QMLKLWQQFKDISLHH----SSEIYQQLNVTLTDADVRGESFYNDDLAPLVKALQDQGLA 280

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +  Q++F    +   G+     + K  G + Y   DLA  + +        ++Y +
Sbjct: 281 -VESEGAQVVFLPELADKDGNPSPVIIQKQGGGFLYATTDLAALRYRVNTLNAKRIMYFI 339

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSK------------- 402
            +  S +++++  ++         +++  L     +  DG P K                
Sbjct: 340 DARQSLHMQQVFTISRKAGFVSDAVSLEHLAFGTMMGSDGKPFKTRTGGTVKLAELLSEA 399

Query: 403 --RAGDFITLR----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RA   ++ +           +  +VG  +V++  L +  +    F +  +    + N 
Sbjct: 400 VDRAASVVSEKNPELAGEDIAEIARKVGIGAVKYADLCKTRTNDYVFSWESMLSF-EGNT 458

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAY R +SIFR+A          + P  +          E  L + L ++  V++
Sbjct: 459 APYLQYAYTRVQSIFRKAG---------VAPETLGSPILLGSEQEKALAIKLLQFSEVLD 509

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P+ L  YLYD+AS++   +      P L+  +  + ++   RL+L H VA  I
Sbjct: 510 QMAREAMPHLLCTYLYDIASLYMSFYEAC---PILK--EGVDAEVRDSRLRLCHLVARTI 564

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+E    M
Sbjct: 565 AQGLGLLGIEVMERM 579


>gi|171778540|ref|ZP_02919667.1| hypothetical protein STRINF_00519 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282763|gb|EDT48187.1| hypothetical protein STRINF_00519 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 563

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 136/610 (22%), Positives = 252/610 (41%), Gaps = 84/610 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R+   + E+D +  V        ++E P++   G L+   A  L+R L   P  IA 
Sbjct: 7   IAERIHTIVPELDQEQIVN-------LLEVPKNSDMGDLAF-PAFSLARILRKAPQMIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I  ++      + +   G  +IN +L    +   +L  ++ +G +Y     G G  V I
Sbjct: 59  EIAEKMDT-AGFEKIEAVGP-YINFFLDKKSISADVLGQVIANGSDYASQDEGHGRNVAI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  +GH R  V+GD+LA++    GY+  +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAM 241
            ++A+  +  D     Y  +  +   K   D+ + E    L   +E+ + + + +  +++
Sbjct: 177 DEEAVKAHPIDELLKLYVRINAEAETKPELDEEAREWFRKLEAGDEEAISLWQWFRDESL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  R     L +  D F  E  ++      + +++D L  +G + E             
Sbjct: 237 VEFNRL-YNELGVSFDSFNGEAFYN----DKMDEVVDILTEKGLLEES------------ 279

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
               +   +      G +    + KSDG+  Y   DLA    +     F   IYV+G++ 
Sbjct: 280 ----QGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           S + K+L+AV   +  +  + ++       + ++G   K+S R G+ I            
Sbjct: 336 SAHFKQLKAVLNEMDFEWNE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVKR 392

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            +   VG  +++F  L        DFD   +     E    YVQ
Sbjct: 393 AEDQINAKNPNLADKEAIAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR +SI R+AK          F  +V    S  D    +++  + ++PR+I+ A   
Sbjct: 452 YAHARIQSILRKAK----------FTPSVNDVYSLDDAESWEIVKLIQDFPRIIKRAADN 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL L +A A+++   L 
Sbjct: 502 FEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYATATVLKEALR 553

Query: 576 IIGVESPNEM 585
           ++GVE+PNEM
Sbjct: 554 LLGVEAPNEM 563


>gi|225024090|ref|ZP_03713282.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC
           23834]
 gi|224943115|gb|EEG24324.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC
           23834]
          Length = 572

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 237/617 (38%), Gaps = 77/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L    S  L    ++      +E      +V++  ++   G    N  M  ++    +
Sbjct: 1   MNL----SHLLNREAEQAFATASIEGA---PVVLQPAKNPEFGDFQINGVMGAAKQRKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +     + S  +AG GFINL L+P +L K + + + S    G       
Sbjct: 54  PRELAQKVADALANSELIASAEVAGPGFINLRLNPQFLAKQVHAALQS-SRLGVAQAAAP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R +++GD+L  + +F G+ V  + ++ D G Q   L   
Sbjct: 113 QTIIIDYSSPNLAKEMHVGHLRSSIIGDSLNRVHSFLGHRVIAQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  +  Q  +   +DL + Y             AD     ++     +E  L + + +  
Sbjct: 173 LVEQQAQNEHFELADLEQFYRNAKVRFDEDPAFADTAREYVVKLQSGDEAVLALWRQFVE 232

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            ++    +   K  L +  +    E  ++      ++ ++++L  +G   E         
Sbjct: 233 ISLQHAEKVYAKLGLLLTREDVAGESKYN----DDLQPVVNDLIAKGLAVE-------DD 281

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +   +D  +        G+     + K  G + Y   DLA  +    R   + ++YV+
Sbjct: 282 GAKVVFLDEFK-----NKEGEPAAYIVQKKGGGFLYSTTDLACIRDYVGRLKGNRLLYVV 336

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                 +  +L A +         +    +     + +DG P K   R+GD + L  ++D
Sbjct: 337 DHRQGLHFGQLFATSRLAGYLPENVKAEFIGFGTMMGKDGKPFK--TRSGDTVKLVELLD 394

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 395 EAVERATALVKEKNPELDDATAAQIGRSVGIGAVKYADLSKNRTSDYIFDWDNMLSF-EG 453

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R +S+ ++A +                Q    +  E QL   L ++  V
Sbjct: 454 NTAPYLQYAYTRVQSVLKKAGEWSR-----------TEQPVFTEPLECQLAAELLKFEDV 502

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++    +  P+ LA YLY +AS+F   +           ++A    +   RLQL      
Sbjct: 503 LQTVADSSYPHYLAAYLYQVASLFSRFYEAC------PILKAEG-SVRNTRLQLAALTGQ 555

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+++G+++   M
Sbjct: 556 TLQTGLSLLGIDTLEVM 572


>gi|325275658|ref|ZP_08141554.1| arginyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324099202|gb|EGB97152.1| arginyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 578

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 118/600 (19%), Positives = 231/600 (38%), Gaps = 73/600 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +    D+  V IAG GF+N + +   L   L + +      G    G   KV ++
Sbjct: 65  KLINALPASADISKVEIAGPGFLNFFQNTDALANRLDAALAD-AHLGARKAGPAQKVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G  V R+ ++ D G Q   L   +    +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDTVIRQNHVGDWGTQFGMLMAYLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   + + L +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKQRFDESEAFATRARGLVVKLQAGDPECLALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++      + +++ +L  +G + E        +  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----DDLANVVADLKAKGLLVE-------DQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             +D     F+++  GD +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLDE----FKNSD-GDPLPVIVQKADGGYLYATTDLAAVRYRSNVLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--- 416
           + +  ++  VA         + +       +   DG P K   R G  + L  ++ E   
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMQMEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLTEAKE 401

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    F+F  +    + N   
Sbjct: 402 RAYALVKEKNPSLADDELRRIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAP 460

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R   +FR+    F   D  +  +            E  L   LA++   + + 
Sbjct: 461 YLLYAYTRVAGVFRKLGKRFDQADGKIVLQAA---------HEQDLAARLAQFGETLNSV 511

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLYDLA +F   + +         + A   +    RL+L       +  
Sbjct: 512 AEKGTPHVLCSYLYDLAGLFSSFYENC------PILAAETPEQQQSRLRLAALTGRTLKQ 565


>gi|113955154|ref|YP_731855.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123327552|sp|Q0I6R7|SYR_SYNS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|113882505|gb|ABI47463.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 590

 Score =  405 bits (1042), Expect = e-110,   Method: Composition-based stats.
 Identities = 138/629 (21%), Positives = 236/629 (37%), Gaps = 92/629 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  L   L+E   +   +   L    +        G    N A+ L++PL   P  IA 
Sbjct: 4   IAQALDTQLREAMQRAFPDVDALLDPQLAPANKPEFGDFQANGALPLAKPLKQAPRLIAG 63

Query: 67  LIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV  ++ DP          IAG GFINL + P  L   +S+ +      G   +     
Sbjct: 64  AIVEALQADPAFAALCLEPQIAGPGFINLTIRPERLAAEVSARLGD-PRLGVPEVQSDAA 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 123 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHRVLRLNHVGDWGTQFGMLITHLK 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               + L   D+              +G +L   Y      F E++         V  + 
Sbjct: 183 QVAPETLNRADA------------VDLG-DLVAFYREAKKRFDEDEAFQATSREEVVKLQ 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQK 301
                 LKA  +  D         R +   I D +D  L+ +G  +            ++
Sbjct: 230 GGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLSERGESFYNPYLASVLSGLKE 282

Query: 302 CDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYERGFD---- 350
            D+    D  + +F   + G D   +   + KSDG + Y   DLA  + ++    D    
Sbjct: 283 ADLLVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGA 342

Query: 351 -NMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +IYV  +  + +   +  VA   +   +  ++  +   LV+   DG   K+  R+GD 
Sbjct: 343 RRVIYVTDAGQANHFAGVFQVAKRANWIPEHGRLEHVPFGLVQ-GEDGK--KLKTRSGDT 399

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 400 VRLRDLLDEAVERAEADLRRRLEEEGRSEDDQFIEHVAGTVGLAAVKYADLSQNRITNYQ 459

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+  D+  +     F           +  E 
Sbjct: 460 FSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLEAEAGMLQFS----------EPQEW 508

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A  + L 
Sbjct: 509 SLVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKAEGQSL- 561

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L    A  + SGL ++G+ +   M
Sbjct: 562 PSRLALCRLTADTLKSGLGLLGIATLERM 590


>gi|104779603|ref|YP_606101.1| arginyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|122985979|sp|Q1IGB8|SYR_PSEE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|95108590|emb|CAK13284.1| arginine tRNA synthetase [Pseudomonas entomophila L48]
          Length = 578

 Score =  405 bits (1041), Expect = e-110,   Method: Composition-based stats.
 Identities = 121/600 (20%), Positives = 239/600 (39%), Gaps = 73/600 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A +    D+    IAG GF+N + +   L   L + +      G +  G   KV I+
Sbjct: 65  KIIAALPTSADISKAEIAGPGFLNFFQNTDALANRLDAALADD-HLGVHKAGPVEKVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G +V R+ ++ D G Q   L   + +  +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDDVIRQNHVGDWGTQFGML---LAYLEE 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   +   L +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPDCLALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++      + +++ +L  +G + E       S+  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----DDLANVVADLKSKGLLVE-------SQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             ++     F++T  G+ +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLEE----FKNTE-GEPLPVIVQKADGGYLYATTDLAAVRYRSNTLQADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--- 416
           + +  ++  VA         + +       +   DG P K   R G  + L  ++ E   
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMKMEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLTEAKE 401

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    F+F  +    + N   
Sbjct: 402 RAYALVKEKNPSLAEDELRKIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAP 460

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R   +FR+    F ++D ++  +            E  L   LA++  ++ N 
Sbjct: 461 YLLYAYTRVAGVFRKLGKGFDEVDGNIVLQAA---------HEQDLAARLAQFGEILNNV 511

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLYDLA +F   + +         + A   +    RL+L       +  
Sbjct: 512 ADKGTPHVLCSYLYDLAGLFSSFYENC------PILAAETAEQQQSRLRLAALTGRTLKQ 565


>gi|34497417|ref|NP_901632.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932057|sp|Q7NWM1|SYR_CHRVO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34103272|gb|AAQ59634.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 572

 Score =  405 bits (1041), Expect = e-110,   Method: Composition-based stats.
 Identities = 131/587 (22%), Positives = 242/587 (41%), Gaps = 74/587 (12%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V++       G    N  M  ++ L  +P  +AE +VA + +    D V IAG GFIN++
Sbjct: 26  VVQPASKPEFGDYQANGVMGAAKALKTNPRALAEKVVAALDLAGIADKVEIAGPGFINIH 85

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+P YL +   + +            K  +V +E+ S N    MHVGH R +++GD LA 
Sbjct: 86  LAPEYLARRSEAALKDDKLG--IAPVKPLRVMVEYSSPNLAKEMHVGHLRSSIIGDALAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +M + G++V R  ++ D G Q   L   +   R+        SDL   Y          +
Sbjct: 144 VMEYVGHDVVRANHVGDWGTQFGMLVAYLVETRHAGDADLQLSDLETFYRNAKIRFDESE 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDFHR 267
           + A+     ++     +E+ L + + + V   +K   D  + LN+  + +    E  ++ 
Sbjct: 204 DFANTARDYVVKLQGGDEEVLKLWRQF-VDVSLKHCEDVYEKLNVGLKREHVRGESSYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                +  I+  L  +G + E           Q   +D     FR T     +   + K 
Sbjct: 262 ---DDLPVIVQELREKGLLTE-------DDGAQVVFLDE----FR-TQEDKPMGVIVQKK 306

Query: 328 DGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
           DG + Y   D+   + ++ E   D +IYV+ +  S +  ++  +          + +  +
Sbjct: 307 DGGFIYTTTDIGAVRYRHRELKLDRVIYVVDARQSQHFAQMFTICRKAGFAPEAMKLEHV 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
              V +  DG P K   R+G  + L  +++E                           VG
Sbjct: 367 GFGVMMGDDGKPFK--TRSGGTVKLIELLNEAEERAYALVSEKNPDLSDAQKREIANAVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +       F++  +    + N   Y+QYAY R +S+FR+A+      D+D
Sbjct: 425 IGAVKYADLSKNRMSDYIFNWDTML-AFEGNTAPYLQYAYTRVQSVFRKAE------DYD 477

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              R VI      + +E QL   LA++   + +      P+ L+ YLY +A++F   +  
Sbjct: 478 ANARIVIT-----EPAEKQLAAALAQFEDTLNSVVEGCYPHYLSLYLYQIATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +  ++   RLQL    A  + +GL+++G++    M
Sbjct: 533 C-------PILKSEGEVRASRLQLAALTAKTLRTGLDLLGIKVLESM 572


>gi|73953490|ref|XP_866915.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 2 [Canis
           familiaris]
          Length = 692

 Score =  405 bits (1041), Expect = e-110,   Method: Composition-based stats.
 Identities = 134/652 (20%), Positives = 261/652 (40%), Gaps = 106/652 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFGCA-IKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECVERVEIAGPGFINVHLRKDFVSQQLTNLLVNGVQLP--ALGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    DI + E    F++     + D++     +G+V          
Sbjct: 309 KLICDVSRQEFNKIYDALDISLIERGESFYQ---DRMNDVVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   D +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAALKQRLFEEKADMIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLC--ELVRLYRDG------------------ 395
           + +  S + + +   A  +     ++  +      V L  D                   
Sbjct: 408 VDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKGIGRGRSRLHVGSPMWDS 467

Query: 396 ------------MPIKMSKRAGDFITLRHVVDE--------------------------- 416
                          K   R+G+ + L  +++E                           
Sbjct: 468 IPGLQDQALENLKQKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQ 527

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A     +
Sbjct: 528 TSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----N 581

Query: 475 LDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           ++ ++  +     +   D   E +L   +  +P +++        + L  Y+Y+LA+ F 
Sbjct: 582 INEEMLQKAAQETKIVLDHEKEWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFT 641

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +       + R       K+ M R+ L  AVA+I+    +I+G++    M
Sbjct: 642 EFYDSCYCVEKDRQ-TGQVLKVNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 692


>gi|331703585|ref|YP_004400272.1| arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802140|emb|CBW54294.1| Arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 554

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 175/581 (30%), Positives = 298/581 (51%), Gaps = 45/581 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N LK I  K+ + K+     +IE  ++   G LS++  +I S+ +   PL +AE+    +
Sbjct: 11  NDLKNICQKLNITKE----PIIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +     ++ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAMMKII 245
           D+  PE  Y G     + K + +KY+ +  +         ++    + K  S+   +KII
Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++     +  +Y                  
Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLKLYESKDALYY----------------K 286

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
              L  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 287 DDALFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDLDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QAK              +
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTK-------KITPLI 459

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++       
Sbjct: 460 KQTNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------E 513

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +  N+ +LT +RL  + A+  ++ +   IIG++   EM
Sbjct: 514 IKIIDENDLQLTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554


>gi|210623510|ref|ZP_03293855.1| hypothetical protein CLOHIR_01805 [Clostridium hiranonis DSM 13275]
 gi|210153568|gb|EEA84574.1| hypothetical protein CLOHIR_01805 [Clostridium hiranonis DSM 13275]
          Length = 565

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 134/614 (21%), Positives = 251/614 (40%), Gaps = 84/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           DF   + + LKE     ++E   L+ I   IE P +   G  +      L++     P  
Sbjct: 2   DFKLEVASALKE-----QIEDLTLEEIQSYIEIPPNKEMGDYAF-PCFKLAKIFRKAPNM 55

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTK 122
           IAE I  +I+    +  V   G G++N ++  S L + + +  +     YG++ +GKG  
Sbjct: 56  IAEDIAGKIEPKGSISKVVQLG-GYVNFFVDKSKLAETVINKVLTEKENYGKSELGKGKT 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           V ++F S N   P H+GH R  V+G+ L  +    GY + R  ++ D G Q   L ++  
Sbjct: 115 VVVDFSSPNIAKPFHIGHIRTTVIGNALYKIYNSQGYNMVRINHLGDYGTQFGKLIVAFK 174

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFP--EEKWLPIVKDYSV 238
            W  ++ + +N        Y   + +  V  E+ D+  +        +E+   + + +  
Sbjct: 175 LWGDKETVESNPIPELLKLYVRFHDEAEVHPEMEDEARAWFTKLENGDEEAKALWQWFRD 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +++ +  R     L+I+ D +  E  +       +  +ID +  +G + E       S+ 
Sbjct: 235 ESLKEFSRV-YDLLDIEFDSYAGESFY----SDKMDRVIDLIKEKGLLEE-------SEG 282

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
           T   ++D   L              + K DGS  Y   DLA    + E   FD  +YV+G
Sbjct: 283 TNIVNLDAYNL----------TPALITKKDGSTLYMTRDLAAAIYRKETYDFDKCLYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--- 414
           S  + + ++L  V   +  + ++  V +   +     G    MS R G  + L  V+   
Sbjct: 333 SQQALHFQQLFKVLELMGYEWSKDLVHVPFGMVALESGT---MSTRKGRVVFLEDVLRQA 389

Query: 415 ----------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                  +VG  +V F  L     +   F + K      E    
Sbjct: 390 IEKTKDIILTKNPNAENVDEIAKQVGVGAVVFQELSNSRIKDYTFSWDKTLSFDGE-TGP 448

Query: 453 YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           YVQY +ARC ++ R+A +++  D+D+ L            D    +++  +  + + I  
Sbjct: 449 YVQYTHARCCAVLRKANEEVTSDIDYSLLS----------DEGSSEVLKVIESFNKCILA 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +    EP+ +  ++ DLA  F+  +           +  ++ +L   RL LV A    I 
Sbjct: 499 SMKKNEPHIVTRFVLDLAQAFNKFYHDN-------PILVDDAELRKARLALVEATRQSIE 551

Query: 572 SGLNIIGVESPNEM 585
           +GL ++G+ +P++M
Sbjct: 552 NGLALLGMHAPHKM 565


>gi|83643984|ref|YP_432419.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|109894996|sp|Q2SMY0|SYR_HAHCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83632027|gb|ABC27994.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 578

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 122/624 (19%), Positives = 235/624 (37%), Gaps = 85/624 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L      ++   L                 +++       G    N  M  ++ L ++
Sbjct: 1   MNLQQLLEQKISAALHAAGAPEGSPA------IVKPSGKPQFGDYQANGVMGAAKALKMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  ++  + +    + V IAG GFIN++LS  ++ + L  ++         L    
Sbjct: 55  PRELATKVLDVLDLGDMAEKVEIAGPGFINIFLSKDWMSQSLRQVLAD-PRLTIPLDSPK 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--- 177
             V +++ + N    MHVGH R  ++GD +   + F G+ V R+ ++ D G Q   L   
Sbjct: 114 QTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVIRQNHVGDWGTQFGMLLAY 173

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKD 235
              +    QQ L    +DL   Y           E  D     ++     +++ + + K 
Sbjct: 174 MNKLKAENQQTLSMELADLENFYRQAKTCFDEDPEFKDSARQYVVKLQSGDQECVSLWKT 233

Query: 236 YSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + +   ++   D  + LN+       + E  ++   P+    +ID+L  +G +       
Sbjct: 234 F-IDISLQHCEDVYERLNVSLTRADVMPESAYNEDLPN----VIDDLREKGLL------- 281

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349
                    + D  + +F     G D   +   + KSDG Y Y   DLA  + +      
Sbjct: 282 --------TNSDGAECVFMDEFKGKDDETLPLIVKKSDGGYLYATTDLAALRYRERVLKA 333

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFI 408
           + ++Y + +  S ++ ++ A           +++  +   + L  DG P K   R G  +
Sbjct: 334 NRVLYFVDARQSLHLNQVYAAGRKAGFVSPDMSLEHMAFGMVLGADGKPFK--TRDGGTV 391

Query: 409 TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
            L  ++ E                           VG  +V++  L +  S    F F  
Sbjct: 392 KLADLLTEAQGRAYAVVKGKNPEMPEEELNRIAHVVGMAAVKYADLSKNRSSDYIFSFDA 451

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +    + N   YVQYAY+R  ++F++ +      + DL            +  E  L V 
Sbjct: 452 MLSL-EGNTAPYVQYAYSRVVNVFKKGEVGNLTFEGDL---------QLAEPIERALAVR 501

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L ++  ++ +      P+ L  YLYDL+  F   +           ++A    +   RL 
Sbjct: 502 LLQFNEILHSVASEGCPHILCGYLYDLSKEFASFYEGC------PVLKAEEP-VRSSRLM 554

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L   +A  +  GL+++G+E+   M
Sbjct: 555 LSLLIAKTLKQGLDLLGIETLERM 578


>gi|124024435|ref|YP_001018742.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166232822|sp|A2CDB7|SYR_PROM3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123964721|gb|ABM79477.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 603

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 140/637 (21%), Positives = 238/637 (37%), Gaps = 99/637 (15%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           +   + +     E     +     LD   +        G    NAA+ L++PL   P  I
Sbjct: 10  SQLRAAIDRAFPEAAASARESGTGLD-PQLAPASKPEFGDFQANAALPLAKPLKQPPRQI 68

Query: 65  AELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEY-----GRN 115
           A  IV ++ +D   +++     IAG GFINL + P  L   + + +           G N
Sbjct: 69  AAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQARLADARLGVPLVEGDN 128

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              + T V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q  
Sbjct: 129 DGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFG 188

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L   +     +AL   D+              +G +L   Y      F +++       
Sbjct: 189 MLITHLKQVAPEALETADA------------VDLG-DLVVFYRQAKQRFDDDEAFQTTSR 235

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPP 294
             V  +       LKA ++  D         R +   I D +D  L  +G  +       
Sbjct: 236 EEVVKLQGGDPLSLKAWSLLCDQ-------SRREFQKIYDRLDVRLNERGESFYNAYLES 288

Query: 295 KSKTTQKCDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-- 345
             +      +    D  Q +F   + G D   +   + KSDG + Y   DLA  + ++  
Sbjct: 289 VVEDLNVSGLLVSDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFAA 348

Query: 346 ---ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKM 400
                G   +IYV  +  + +   +  VA          ++  +   LV+   DG   K+
Sbjct: 349 PPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWIPDAGRLQHVPFGLVQ-GEDGK--KL 405

Query: 401 SKRAGDFITLRHVVDE-------------------------------VGSDSVRFMMLWR 429
             RAGD + LR ++DE                               VG  +V++  L +
Sbjct: 406 KTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYADLSQ 465

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                  F F ++    + N   Y+ YA  R   I R+  D            +V   E 
Sbjct: 466 NRITNYQFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGD-----------LDVTTAEL 513

Query: 490 EF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +F +T E  L+  L ++  VI        P +L  YL++L+ VF+  +       ++  +
Sbjct: 514 QFSETQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYD------QVPVL 567

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +A        RL L    A  +  GL+++G+ +   M
Sbjct: 568 KAEQPS-RSCRLALCRLTADTLKLGLSLLGIPTLERM 603


>gi|167036128|ref|YP_001671359.1| arginyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083542|sp|B0KN43|SYR_PSEPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166862616|gb|ABZ01024.1| arginyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 578

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 117/598 (19%), Positives = 236/598 (39%), Gaps = 69/598 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVNDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +    D+  V IAG GF+N + +   L   L + +      G    G   KV I+
Sbjct: 65  KLINALPASADISKVEIAGPGFLNFFQNTDALANRLDAALAD-ARLGVRKAGPSEKVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G  V R+ ++ D G Q   L   +    +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDNVIRQNHVGDWGTQFGMLMAYLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   + + L +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPECLALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++      + +++ +L  +G + E       S+  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----DDLANVVADLKAKGLLVE-------SQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             ++  +        G+ +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLEEFK-----NSEGEPLPVIVQKADGGYLYATTDLAAVRYRSNVLNADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKM-------SKRA 404
           + +  ++  VA         + +       +          RDG  +K+        +RA
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMQMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAKERA 403

Query: 405 GDFITL----------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              +            RH+ + VG  +V++  L +  +    F+F  +    + N   Y+
Sbjct: 404 YALVKEKNPSLTEAELRHIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            YAY R   +FR+    F +++ ++  +            E  L   LA++  ++ N   
Sbjct: 463 LYAYTRVAGVFRKLGKGFDEVEGNIVLQAA---------HEQDLAARLAQFGEILNNVAD 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              P+ L  YLYDLA +F   + +         + A   +    RL+L       +  
Sbjct: 514 KGTPHVLCSYLYDLAGLFSSFYENC------PILAAETLEQQQSRLRLAALTGRTLKQ 565


>gi|240080907|ref|ZP_04725450.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240117776|ref|ZP_04731838.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240123331|ref|ZP_04736287.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240128034|ref|ZP_04740695.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268597025|ref|ZP_06131192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268603476|ref|ZP_06137643.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681956|ref|ZP_06148818.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268686424|ref|ZP_06153286.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268550813|gb|EEZ45832.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587607|gb|EEZ52283.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622240|gb|EEZ54640.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626708|gb|EEZ59108.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 572

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 115/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + + +     +G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHAALND-ARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ + D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVADDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R     ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL     + +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGNTLKQGLDLLGIDVLDVM 572


>gi|253582251|ref|ZP_04859474.1| arginyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251835790|gb|EES64328.1| arginyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 570

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 125/618 (20%), Positives = 252/618 (40%), Gaps = 81/618 (13%)

Query: 1   MYLFA-DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +   + +   +N +K++       +K   ++ +    +   G   TN AM+ S+ +G 
Sbjct: 1   MLIIDREIAKIFENTIKKL-----YNEKETKKVEVSVATNEKFGDFQTNFAMMNSKIIGK 55

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P TIA+ I+  ++ +  +D + IAG GFIN++L   YL ++L        EY  + + +
Sbjct: 56  NPRTIAQEILDNLEENDVIDKLEIAGPGFINIFLKSKYLGEVLKKSRTE--EYDFSFLNR 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+F S N    MH+GH R  ++GD++  +  + GY +  + +I D G Q   L +
Sbjct: 114 EGDVIIDFSSPNIAKRMHIGHLRSTIIGDSITRIYKYLGYHMIADNHIGDWGTQFGKLII 173

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLNFPEEKWLPIVKD 235
               W  ++A   N  +  E  Y             E   +   + L   + +   + K+
Sbjct: 174 GYRRWLDKEAYKENPIEELERVYVEFSKLSESNPELEEEARLELKKLQDGDPENFALWKE 233

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           + ++  +       K L++  D +  E  +H      ++ +++ L  +G   E       
Sbjct: 234 F-IKVSLDEYDKLYKRLDVHFDTYYGESFYHPM----MQGVVEELVEKGLAVE------- 281

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIY 354
               +      +  LF            + K DG++ Y  +D+A  K K E    + +IY
Sbjct: 282 DDGAKVVFFPEEDNLF---------PCIVQKKDGAFLYSTSDIATIKFKKEAYKINKLIY 332

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +       + K+   +   +     +    +   +  + DG+    S R G+ I L  ++
Sbjct: 333 LTDERQQDHFKQFFKITDMLGWNVEK--HHIWFGIMRFADGV---FSTRKGNVIRLEQLL 387

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  ++++  L +     + F++ K+    +
Sbjct: 388 DEGKKRAYDIVQEKNPDLSEEEKDQIAEVVGVGAIKYADLSQNRQSPIIFEWDKIL-TFE 446

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QY+YAR +SI R+A+     + +D        +    D  E  L  H+A +P 
Sbjct: 447 GNTAPYLQYSYARIQSILRKAESEGKSITYD-------KEIKIEDKLERALANHIAAFPI 499

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A+   +P  +A YL++L+  F+  ++          +   + +L   R  +     
Sbjct: 500 SVLKASETFKPNIIADYLFELSKKFNSFYNSC------PILNQED-ELLYSRALIAKITG 552

Query: 568 SIINSGLNIIGVESPNEM 585
             I  GL+++G+++   M
Sbjct: 553 ETIKDGLSLLGIKTLERM 570


>gi|194098399|ref|YP_002001457.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998805|ref|ZP_04718729.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014279|ref|ZP_04721192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016715|ref|ZP_04723255.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240115482|ref|ZP_04729544.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240121842|ref|ZP_04734804.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240125580|ref|ZP_04738466.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|254493590|ref|ZP_05106761.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268594648|ref|ZP_06128815.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268601156|ref|ZP_06135323.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268684169|ref|ZP_06151031.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|293399211|ref|ZP_06643376.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|238690193|sp|B4RL22|SYR_NEIG2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193933689|gb|ACF29513.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|226512630|gb|EEH61975.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268548037|gb|EEZ43455.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268585287|gb|EEZ49963.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268624453|gb|EEZ56853.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291610625|gb|EFF39735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|317164093|gb|ADV07634.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 572

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 114/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + + +     +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHAALND-ARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ + D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVADDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R     ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL     + +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGNTLKQGLDLLGIDVLDVM 572


>gi|251783482|ref|YP_002997787.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392114|dbj|BAH82573.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 563

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 127/611 (20%), Positives = 254/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  GELAEQIDGS-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA++ A  GY+  +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             + A+  +  D     Y  +  +       D+ + E    L   +++   + + +  ++
Sbjct: 176 GDEAAVQAHPIDELLKLYVRINAEAETDPTVDEEAREWFRKLEDGDKEATELWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     LN+  D +  E  ++      + ++++ L  +  + E            
Sbjct: 236 LLEFNRL-YNQLNVTFDSYNGEAFYN----DKMDEVLELLEAKNLLVES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G++
Sbjct: 280 -----KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            + + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 335 QAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEAIN 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L        DFD   +     E    YV
Sbjct: 392 RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  + 
Sbjct: 451 QYAHARIQSILRKAD----------FTPSTTTTYSLADAESWEIIKLIQDFPRIIKRTSD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++   L
Sbjct: 501 NFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDSRLALCYATATVLKEAL 552

Query: 575 NIIGVESPNEM 585
            ++GVE+PNEM
Sbjct: 553 RLLGVEAPNEM 563


>gi|83942561|ref|ZP_00955022.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846654|gb|EAP84530.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 364

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 173/368 (47%), Positives = 244/368 (66%), Gaps = 6/368 (1%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
               ++  E  WL  V++++   MMK+IRDDL +L ++ D+F SE   +      I   I
Sbjct: 2   GDAYIDADESVWLEEVRNFATDEMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAI 59

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           D+L  +G +YEG+L PPK K  +  +  R+Q LF+ST  GDDVDRP++KSDG +TYFA D
Sbjct: 60  DDLKAKGLIYEGVLEPPKGKKPEDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPD 118

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +AY   K +RGFD +I V G+DH GYVKR++A  +A+SE    +++ L +LV+L+++G  
Sbjct: 119 IAYHYDKVQRGFDRLIDVFGADHGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKE 178

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSKRAG F+TLR VVD+VG D  RF+ML RKN  +LDFDF KV EQS+ENPVFYVQYA
Sbjct: 179 FKMSKRAGTFVTLRDVVDQVGPDVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYA 238

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+ R+A +   D D +   R  + Q      +EL+L   LAE+PR++E A  + E
Sbjct: 239 HARVHSVLRKAAEAGVDTDIETLQRADLSQ--LDHEAELKLAQKLAEWPRMVETAARSNE 296

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+++AFYLY+LA  FHG W+ G + P LRF+Q ++  L+  ++ L  A A +I SGL I+
Sbjct: 297 PHRIAFYLYELAGDFHGLWNRGNDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGIL 355

Query: 578 GVESPNEM 585
           GV+   EM
Sbjct: 356 GVKPAEEM 363


>gi|59801352|ref|YP_208064.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|75355970|sp|Q5F835|SYR_NEIG1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|59718247|gb|AAW89652.1| putative arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 572

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 114/587 (19%), Positives = 234/587 (39%), Gaps = 72/587 (12%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           +V++  ++  HG    N  M  ++    +P  +A+ +   +  +  ++S  +AG GFINL
Sbjct: 25  VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + + + +     +G     +   V I++ S N    MHVGH R +++GD+++
Sbjct: 85  RLRHEFLAQNIHAALND-ARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F+G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 261

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ + D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 262 ---DDLQPVADDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 306

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R     ++YV+    + + ++L   +              +
Sbjct: 307 GGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAKAEFI 366

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                + +DG P K   R+GD + L  ++ E                           VG
Sbjct: 367 GFGTMMGKDGKPFK--TRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKTVG 424

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A +        
Sbjct: 425 IGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW------- 476

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +        +  E QL   L ++  V+++      P+ LA YLY  A++F   +  
Sbjct: 477 ----DATAPTVLTEPLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFYEA 532

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++A        RLQL     + +  GL+++G++  + M
Sbjct: 533 C------PILKAEGAS-RNSRLQLAKLTGNTLKQGLDLLGIDVLDVM 572


>gi|91080725|ref|XP_975392.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum]
 gi|270005463|gb|EFA01911.1| hypothetical protein TcasGA2_TC007521 [Tribolium castaneum]
          Length = 671

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 140/600 (23%), Positives = 243/600 (40%), Gaps = 86/600 (14%)

Query: 32  IVIERPRDCAHGHLSTNAAMILS---RPLGL--DPLTIAELIVARIKIDPDVDSVFIAGK 86
           +VI    +   G    N+AM +S   + LG    P  IA  IV  +     VD + +AG 
Sbjct: 112 VVITLSNNAKFGDYQCNSAMQISNIYKQLGKKVSPRDIANKIVENVSPHELVDKLEVAGP 171

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+++S ++  + LS+I   G+   R    K  +V ++  S N    MHVGH R  ++
Sbjct: 172 GFINVFVSKAFGLRNLSTIFTHGV---RPPPYKKLRVVVDLSSPNIAKEMHVGHLRSTII 228

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GDT+  L+ F G++V R  +I D G Q   L + +  ++   L       P       Y 
Sbjct: 229 GDTICRLLEFLGHDVLRINHIGDWGTQFGMLIVHLQEKFPDYLSKAP---PISDLQAFYK 285

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDY--------SVQAMMKIIRDDLKALNIQHDI 258
           +      + K   E  +F +  +  +VK          + Q +  + R + + +  + D+
Sbjct: 286 E------SKKRFDEDEDFKKRAYAGVVKLQSGDPNYIKAWQLICDVSRKEFQVIYDRLDV 339

Query: 259 FISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            + E    F++   S + DI+  L   GY+                + D  + +      
Sbjct: 340 KLIERGESFYQ---SRMNDIVKELEAGGYL----------------EDDEGRKVMWGDKN 380

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             ++   ++KSDG YTY  +DLA  K +  E   D +IYV  +    +   L  +A  + 
Sbjct: 381 DGNIPFTVVKSDGGYTYDTSDLATIKQRIVEEKGDWLIYVTDAGQGTHFYILFQIARKIG 440

Query: 376 EKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
                I V  +   V L  D    K   R+GD + L  +++E                  
Sbjct: 441 LLTDNIRVDHVPFGVVLGEDKK--KFKTRSGDTVRLIDLLEEGLKRALDKLKEKGRDQVL 498

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      +    +++  L         F F K+ E  K N   Y+ YAY R RSI 
Sbjct: 499 TPEELKQAQESIAYGCIKYADLSHNRHHEYVFSFDKMLE-DKGNTAVYLLYAYTRIRSIA 557

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R A      ++ D+   + I  + E    E +L   L ++P  ++  T    P+ L  Y+
Sbjct: 558 RTANFDDKKIE-DVAKSHTISLDHE---KEWKLAKVLLKFPEELDKVTKDLCPHHLCEYV 613

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y++A+ F   +       +      +  K+   R+ L  A A ++   L+I+G++   +M
Sbjct: 614 YEIATTFTEFYDSCYCVEKDS--SGDIVKVNHGRILLAEATARVMAKCLDILGLKPVAKM 671


>gi|237750164|ref|ZP_04580644.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229374351|gb|EEO24742.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 556

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 160/575 (27%), Positives = 285/575 (49%), Gaps = 48/575 (8%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-----------K 73
           ++KI   I +E P+D  HGH +T     L++ L  +P  +A+ +                
Sbjct: 16  QEKINLIIALEHPKDKRHGHFATPLCFTLTKILRTNPKVLAQSLQDFFMQYDLDSNSTKP 75

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
                 S+  A  G++NL L+ S+L  +L   + S  ++ +    K TK+ +E+VSANPT
Sbjct: 76  FKKMFSSIE-ALNGYLNLTLTHSFLTYMLEVALQSPKDFAKGE-CKNTKILLEYVSANPT 133

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
           GP+H+GH R A+ G  L  +    GY++  EYY+NDAG+QI+ LALSV+    + L  N 
Sbjct: 134 GPLHIGHARGAIFGSVLQRIGKRLGYDIKGEYYVNDAGSQIDMLALSVYNSAAKIL--NL 191

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDLK 250
             L    Y G Y+  V ++    +        + +   I++    Y+   M+++I+++L 
Sbjct: 192 ESLSGEVYKGEYIDSVAQDAIKHFGESFFRTADSQKTDILQKIGLYAKDMMLEVIKENLA 251

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           +L+I  D F+SE + +    +   D +  L     +                      + 
Sbjct: 252 SLSIDFDYFVSEKELY----TRFDDTMKTLETHNALLH----------------QDGAIW 291

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
            +ST+ GD+ DR L++ +G  TY A D+ Y K K++R +++ I + G+DH GY+ R++A 
Sbjct: 292 LQSTLKGDEKDRVLVRDNGMPTYMAGDIIYHKDKFDRDYNHYINIWGADHHGYIARIKAS 351

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              +      + VLL ++V L +DG P KMSKRAG+FI ++ VV+++G+DS++F+ L + 
Sbjct: 352 IDFLGFDSKNLEVLLAQMVSLLKDGQPYKMSKRAGNFILIQDVVNDIGADSLKFVFLSKS 411

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               L+FD   + ++   NPVFY+ YA AR  ++  ++     D++       +   +S 
Sbjct: 412 LDTHLEFDVQDLSKEDSSNPVFYINYANARIHTLLEKSSLSLEDINKTDLSTLLDSNDSL 471

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
              S   ++  L  +  V+  +   +   KL  YL +LA  FH  ++  R       +Q 
Sbjct: 472 GQDSMQLILQSLGLF-YVLNQSYEERALQKLCEYLKNLAKSFHTFYNAHR------ILQT 524

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       L++   V+  + +G N++G+    +M
Sbjct: 525 EHEAGI---LKIFLLVSLSLTTGFNMLGINIKTKM 556


>gi|322412861|gb|EFY03769.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 563

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 126/613 (20%), Positives = 248/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  GELAEQIDAS-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA++ A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYIR----INAEAETDPTVDGEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + ++++ L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLNVTFDSYNGEAFYNDKMDEVLELLETKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDSRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GVE+PNEM
Sbjct: 551 ALRLLGVEAPNEM 563


>gi|225871422|ref|YP_002747369.1| arginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782983|sp|C0MAS8|SYR_STRE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225700826|emb|CAW95535.1| arginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 563

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 134/612 (21%), Positives = 250/612 (40%), Gaps = 82/612 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + +   + +I  +++ +  I +  ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIAAEIAKIVPELE-QAAIFN--LLETPKNSDMGDLAFP-AFSLAKALRKAPQAIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  RI      + V   G  ++N +L  + +  ++L+ ++  G +Y +   G+G  + 
Sbjct: 58  SDLAERIDAS-QFEKVAAVGP-YVNFFLDKASISAQVLTQVIADGADYAQQDEGQGRHIA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             + A+  +  D     Y  +  +       D+ + E     EE      +D     + +
Sbjct: 176 GNEAAVQAHPIDELLKLYVRINAEAETDPSLDEEAREWFRRLEE------RDQEATELWQ 229

Query: 244 IIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             RD+ L   N  +D      D + G+      + ++++ L  +G + E           
Sbjct: 230 WFRDESLIEFNRLYDQLGVSFDSYNGEAFYNDKMDEVLELLEDKGLLVES---------- 279

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
                 +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G+
Sbjct: 280 ------KGAKVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVGN 333

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI---------- 408
           + + + K+L+AV   +    +  ++       + + G   K+S R G+ I          
Sbjct: 334 EQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEAI 390

Query: 409 ---------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                              V   VG  +++F  L        DFD   +     E    Y
Sbjct: 391 SRAANQIEAKNPKLANKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGPY 449

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQYA+AR +SI R+A           F        S  D    ++I  + ++PR+I+ A 
Sbjct: 450 VQYAHARIQSILRKA----------SFTPATDTSYSLNDPESWEIIKLIQDFPRIIKRAF 499

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A +   LA  F+ +++H R       +  ++ +    RL L +A A ++   
Sbjct: 500 DNFEPSIMAKFAIHLAQSFNKYYAHTR-------ILEDDPE-RDNRLALCYATAIVLKEA 551

Query: 574 LNIIGVESPNEM 585
           L ++GVE+PNEM
Sbjct: 552 LRLLGVEAPNEM 563


>gi|225869424|ref|YP_002745372.1| arginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511657|sp|C0MGC8|SYR_STRS7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|225702700|emb|CAX00816.1| arginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 563

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 247/611 (40%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + +   + ++  +++ +  I +  ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIAAEIAKVVPELE-QAAIFN--LLETPKNSDMGDLAFP-AFSLAKALRKAPQAIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  RI      + V   G  ++N +L  + +  ++L+ ++  G +Y +   G+G  + 
Sbjct: 58  SDLAERIDAS-QFEKVAAVGP-YVNFFLDKASISAQVLTQVIADGADYAQQDEGQGRHIA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             + A+  +  D     Y  +  +       D+ + E     EE         + +    
Sbjct: 176 GNEAAVQAHPIDELLKLYVRINAEAETDPSLDEEAREWFRRLEEGDQE-----ATELWQW 230

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + L   N  +D      D + G+      + ++++ L  +G + E            
Sbjct: 231 FRDESLIEFNRLYDQLGVSFDSYNGEAFYNDKMDEVLELLEDKGLLVES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G++
Sbjct: 280 -----KGAKVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            + + K+L+AV   +    +  ++       + + G   K+S R G+ I           
Sbjct: 335 QAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEAIS 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L        DFD   +     E    YV
Sbjct: 392 RAANQIEAKNPKLANKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A           F   V    S  D    ++I  + ++PR+I+ A  
Sbjct: 451 QYAHARIQSILRKA----------SFTPAVDTSYSLNDPESWEIIKLIQDFPRIIKRAFD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +   LA  F+ +++H R       +  ++ +    RL L +A A ++   L
Sbjct: 501 NFEPSIMAKFAIHLAQSFNKYYAHTR-------ILEDDPE-RDNRLALCYATAIVLKEAL 552

Query: 575 NIIGVESPNEM 585
            ++GVE+PNEM
Sbjct: 553 RLLGVEAPNEM 563


>gi|42561129|ref|NP_975580.1| arginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81400554|sp|Q6MT14|SYR_MYCMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42492626|emb|CAE77222.1| arginine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320483|gb|ADK69126.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 554

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 178/581 (30%), Positives = 300/581 (51%), Gaps = 45/581 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           N LK I  K+ + K+     +IE  ++   G LS++  +I S+ +   PL +AE+    +
Sbjct: 11  NDLKNICQKLNITKE----PIIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
            +     ++ IA  GF+N+ + P  L  ++S+++    +YG NL  +   +NIE+VSANP
Sbjct: 67  LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +HVGH R AV+G  L +L   +GY V  EYY+NDAG QIN LA++VF  Y QAL N 
Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEEKWLP-----IVKDYSVQAMMKII 245
           D+  PE  Y G     + K + +KY+ +  +  + + K L      + K  S+   +K+I
Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNYQFKDIKYTDNKILDYNVHSLFKQISIDYFLKVI 244

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  L   N++   + SE + +  D   I  ++     +  +Y                  
Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLKLYESKDALYY----------------K 286

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
              L  ++T  GDD DR L+KSD +YTY   DLA    + +R   D +I V G DH GY+
Sbjct: 287 DDALFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           KR++A  A +      + + + ++VRL +DG   KMSKR G  + L  +++ VG D++R+
Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           M+  + ++  +D D   +  ++  NPV+Y QYA ARC SI  QA+              V
Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQARTK-------KITPLV 459

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E++L++ L  +  VI+N+   +   ++  Y+ ++  +FH +++       
Sbjct: 460 KETNLLNNPKEIELLLVLDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------E 513

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++ +  NN +LT +RL  + AV  ++ +   IIG++   EM
Sbjct: 514 IKIIDENNLQLTKLRLGFIKAVLQVLENAFFIIGIQPVLEM 554


>gi|39932107|sp|Q7VP38|SYR_HAEDU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33147727|gb|AAP95249.1| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 561

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 119/586 (20%), Positives = 225/586 (38%), Gaps = 66/586 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
             ++ +      G    N AM  ++ L ++P   A+ I+  + +   VD + IAG GFIN
Sbjct: 11  EPLVRQSSKPEFGDYQANGAMAAAKKLAMNPREFAQKILDNLDVSDMVDKLEIAGPGFIN 70

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++L PS+L K  +  + +     +    +   + I++ S N    MHVGH R  ++GD +
Sbjct: 71  IFLKPSWLAKQANFALQAVNFGIKTA--QPQTILIDYSSPNVAKEMHVGHLRSTIIGDAV 128

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              + F G  V R  ++ D G Q   L   +     +          E +Y         
Sbjct: 129 VRTLEFLGNNVIRANHVGDWGTQFGMLIAYLEKMENEQASEMQLSDLEAFYRA------- 181

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
              A +       F E+    +VK  S     + +   L  + + H+     +++ R + 
Sbjct: 182 ---AKESYDSDQIFAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHNQ----ENYDRLNV 234

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--TMVGDDVDRPLLKSD 328
           +     +   +    +   I+   K+K     D     +         GD +   + KSD
Sbjct: 235 TLTEKDVMGESLYNPMLPEIVADLKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSD 294

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL-C 386
           G + Y   D+A  K +YE    D  +    S  + ++++   +        A  ++    
Sbjct: 295 GGFLYTTTDIAAAKYRYETLKVDRALVFSDSRQAQHMQQAWLITRKAGYVPASFSLEHPF 354

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
             + L +DG P K   R+G  + L+ ++DE                           V  
Sbjct: 355 FGMMLGKDGKPFK--TRSGGTVKLKDLLDEAVERADKLISARSTNLTVAEKSAVVEAVAI 412

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            SV++  L +  +    FD+  +    + N   Y+QYAY R RSIF +A         ++
Sbjct: 413 GSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFARA---------EI 462

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P  +  +    +  E  L + L ++   +        P+ L  YLY+LA +F   +   
Sbjct: 463 DPDTLTGEMQLTEEKERTLALKLLQFEEALTAVAKEGMPHILCQYLYELAGIFSSFYEAC 522

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   +   +  +   RL+L    A  +  GL+++G+++  +M
Sbjct: 523 -------PMLNADEAIKHSRLRLASLTAKTLKQGLDLLGIKTVEKM 561


>gi|220931665|ref|YP_002508573.1| arginyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782967|sp|B8CWA9|SYR_HALOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219992975|gb|ACL69578.1| arginyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 566

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 245/611 (40%), Gaps = 78/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  +L + + +    + VE+      +IE P     G  +       +      P  IA
Sbjct: 3   DFKEKLVDLISQEINDLNVEE---IEHLIEIPPQPEMGDYAL-PCFKFAGIFKKAPNIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E I ++I+ +     V   G  ++N +++   +   +L  I+  G  YG   IGKG  V 
Sbjct: 59  EEIASKIEGNSYFSKVVNTGP-YVNFFINKEIFAETVLEEILQKGKYYGARNIGKGKNVI 117

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +EF S N   P H+GH R  V+G  L ++  F GY      ++ D G Q   L +++  W
Sbjct: 118 VEFSSPNIAKPFHIGHIRTTVIGHALRNIYNFLGYNAIAINHLGDYGTQFGKLIVALNKW 177

Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQA 240
             +  + +N   +  + Y           EL +K  S    L   +E+ + + K +    
Sbjct: 178 GDKDKIKSNPIPEFLKLYIKFHEEAEKNPELEEKARSWFNRLENKDEEAMDLWK-WIRNM 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K  +     L I  D +  E  +       + D+I+ +  +G + E       S+  +
Sbjct: 237 SLKEFKRVYDMLGIDFDSYAGESFY----SDMMPDVIEEMEEKGLLQE-------SQGAK 285

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D++   +              + KSDGS  Y   D+A    + +   F   IYV+GS 
Sbjct: 286 IVDLEEYNM----------PPAMIEKSDGSTLYITRDIAAAIYRKKTYNFYKNIYVVGSQ 335

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              +  +   +   +  + A+  + +   +    DG    MS R G  + L  V+++   
Sbjct: 336 QKLHFDQWFKIIELMGHEWARDCIHVPFGMVSLEDGT---MSTRKGRVVFLEDVLNKAIE 392

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L+    +   F + +      E    YV
Sbjct: 393 KTKETIEDKNPDLENKEEVAKIVGIGAVIFQELYNSRIKDYVFSWDRTLSFEGE-TGPYV 451

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY Y R +S+  ++   F  LD               D     +I  ++++P  I  A+ 
Sbjct: 452 QYTYVRTKSVLNKSNYKFKKLD---------DYSLLTDEDAFNVIKLISQFPDTIIKASE 502

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  ++ +LA  F+ ++   +       +  +++K+   RL LV+AV +++ +GL
Sbjct: 503 RYEPSIITRHITELAKAFNKYYHDNQ-------ILVDDQKVREARLFLVYAVNTVLKTGL 555

Query: 575 NIIGVESPNEM 585
           +++G+++P +M
Sbjct: 556 SLLGIKTPEKM 566


>gi|297625461|ref|YP_003687224.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921226|emb|CBL55776.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 544

 Score =  402 bits (1033), Expect = e-109,   Method: Composition-based stats.
 Identities = 114/560 (20%), Positives = 213/560 (38%), Gaps = 55/560 (9%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
               GH  +N A+ L++  G  P  +A+ IV ++ +    + V IAG GF+N  L    L
Sbjct: 27  KPQFGHFQSNVALRLAKQQGKPPRQVAQEIVDKLDVGDLCEPVEIAGPGFLNFRLRADVL 86

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              ++  +      G         V I++ + N    MHVGH R  ++GD    ++   G
Sbjct: 87  AGAVTDQLHD-PRAGITPTELPQTVVIDYSAPNAAKQMHVGHLRSTIIGDCFNRVLRAKG 145

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + V  + +I D G Q   L              + +   E Y             AD+  
Sbjct: 146 HTVIAQNHIGDWGRQFGMLIEQALDEKLDLDSLDLAGAEELYKRANAHLKSDDAFADRAR 205

Query: 219 SELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRD 275
             ++     +     +    +             + +      +  E  ++   P     
Sbjct: 206 ERVVKLQNGDADTRAMWRKMIDLSKAGFNKTYARMGVLLTDADYAGESMYNEMLPQ---- 261

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           + D+L ++G                   +D+  L+    + G D    L  S G Y Y  
Sbjct: 262 VCDDLEQRG----------------IAKLDQGALVV--FVKGFDAPAILRNSQGGYGYDV 303

Query: 336 ADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYR 393
            D+A  + +  +   + +IYV+GS+ + +   + AV        A ++   +   + L  
Sbjct: 304 TDVAAVRYRVDDLEANRLIYVVGSEQTYHFNLIFAVCREAGYLPAWVSAQHVGYGMVLGP 363

Query: 394 DGMPIKMSKRAGDFITLRHVVD--------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           DG   K S R G  + L  ++D        E+   ++++  L     +   FD  ++  Q
Sbjct: 364 DGK--KFSTREGTAVHLNDLLDEAEEHAAPEIALAAIKYADLSNSLQKDYVFDPVRMT-Q 420

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           +  +   Y+QYA+AR   I R+A       D +    + I    E    EL L   L  +
Sbjct: 421 TTGDTGPYLQYAHARVSQILRKA-------DAEGLSGDTISVLDEVPEQELAL--WLTRF 471

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              ++       P+KL  YLY+LA+ +   + +    P L+    ++  +   RL L   
Sbjct: 472 GDAVDEVADELTPHKLCTYLYELATKYSTFYENC---PVLK----SDGDVRTSRLALCAT 524

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ +GL+++G+ +P  M
Sbjct: 525 TKRVLATGLDLLGIAAPERM 544


>gi|72160673|ref|YP_288330.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
 gi|109895049|sp|Q47TB0|SYR_THEFY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71914405|gb|AAZ54307.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 576

 Score =  402 bits (1033), Expect = e-109,   Method: Composition-based stats.
 Identities = 131/617 (21%), Positives = 236/617 (38%), Gaps = 86/617 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R+++ L         E +  D ++    R         N A+ L++ L   P  +A 
Sbjct: 8   LARRVQSALG---AAFGPEYRDTDPVI----RPSQFADFQANVALALAKRLRRSPRDVAT 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   + I      V I+G GFINL L   ++   +  ++    E     + +   + I+
Sbjct: 61  AITEHLDISDVCSKVEISGPGFINLTLRDDWIAHQVHDLLTD--ERLGTPVQESQNIPID 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    MHVGH R  VVGD LA ++ F G+ V R+ +I D G     L   +    +
Sbjct: 119 YSAPNVAKEMHVGHLRTTVVGDALARILEFLGHHVIRQNHIGDWGTPFGMLIEHLLEVGE 178

Query: 187 Q-ALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMM 242
             A        P  +Y     K    ++ AD+    ++     + + L + +D     ++
Sbjct: 179 DSAEAAQLKSDPNAFYQAARAKFDSDEDFADRARRRVVALQSGDAETLRLWRD-----LI 233

Query: 243 KIIRDDLKALNIQHDI------FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++ +     +  + D+         E  ++      +  + D LA +G           S
Sbjct: 234 ELSKIYFNRIYRKLDVTLTDAHLAGESTYN----DMLGPVCDELAEKGLA-------VVS 282

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  ++       +   G  V   + KSDG Y Y   DLA  K + E+   D +IYV
Sbjct: 283 DGALCVFLEG-----FTGREGKPVPLIIRKSDGGYGYATTDLATIKYRVEQLKADRIIYV 337

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  S +++ +   A           + +     L  DG  ++   R+G  + L  ++D
Sbjct: 338 VGAPQSLHLRMVYETARQAGWLGNAEPIHVQIGNVLGSDGKILR--TRSGAPVRLMALLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L   +     FDF ++      
Sbjct: 396 EAVERASAVVAQTRPDLDEETRAAIARDVGIGAVKYADLSIAHDTEYVFDFDRMLAL-NG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYA AR RSIFR+           + P  V       + +E  L + L ++   
Sbjct: 455 NTGPYLQYAVARIRSIFRKGG---------IDPAQVTGPIQVTEPAERALALKLLDFGAT 505

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +       EP++L  YL+DLA  F   +           ++A+  ++   RL L      
Sbjct: 506 VVQVGDTLEPHRLCTYLFDLAQTFTAFYEAC------PVLKADRDEVRNSRLALTAVTLH 559

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++GV +P +M
Sbjct: 560 TLVKGLDLLGVRAPEQM 576


>gi|257126716|ref|YP_003164830.1| arginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050655|gb|ACV39839.1| arginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 573

 Score =  402 bits (1033), Expect = e-109,   Method: Composition-based stats.
 Identities = 128/613 (20%), Positives = 253/613 (41%), Gaps = 83/613 (13%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +LK    E   +I      +++I I+       G   TN AM+ S+ +G +P  IA  I+
Sbjct: 7   KLKKLFSENISRI-FGADYIEKIDIQNSTKKEFGDFQTNFAMMSSKLIGKNPREIANTII 65

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
              + +  ++ + +AG GFIN++L  S+L + +    +   +Y  + +     V I++ S
Sbjct: 66  ENFEKNDIIEKLEVAGPGFINIFLKNSFLNEEIKK--LENEKYDFSFLNIDKTVIIDYSS 123

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N    MH+GH R  ++GD++  ++ F G++   + +I D G Q   L ++      +  
Sbjct: 124 PNIAKRMHIGHLRSTIIGDSIKRILNFLGFKTLADNHIGDWGTQFGKLIVAYKNWLDKKA 183

Query: 190 YNNDSDLPEGYYPGVYL-------KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           Y  D   P G    +Y+       K    E   +   + L    E    + K++ +   +
Sbjct: 184 YEED---PIGELERIYVLFSDKAKKDPALEDEAREELKKLQLGNEDNQKLWKEF-IDISL 239

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K      + L++  D +  E  ++   PS    +++ L ++    E              
Sbjct: 240 KEYNKVYERLDVNFDYYYGESFYNDMMPS----VLEELKKKNIARE-------------- 281

Query: 303 DMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSD 359
             D+  L+       DD      + K DGS+ Y  +DLA  K  K E   D  +Y+    
Sbjct: 282 --DQGALVV---FFEDDKLPPAIVQKKDGSFLYTTSDLATMKFRKNELKVDEAVYLTDDR 336

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              + K++  +   + E        +   +  + D      S R+G+ I L  ++DE   
Sbjct: 337 QQNHFKQVFEIGKMLGEPYDYKKTHIVFGIMRFGD---QIFSSRSGNTIRLVDLLDEAKK 393

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +GS ++++  L +  +  + F + KV    + N   
Sbjct: 394 QVKKVIDEKNPNIPEEEKEKIAETIGSGAIKYFDLSQNRTSDITFTWEKVLNF-EGNTGP 452

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QY Y R  SIFR+ ++   +++      N+     E D  E +L   L ++P+ +  +
Sbjct: 453 YLQYTYVRIMSIFRKLEEENINVE------NMDIVLDEMDGIERELASELLKFPQAVVKS 506

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A YL+D A +F+  ++          ++  ++++   R+ L    A ++  
Sbjct: 507 YENFRPNIIADYLFDTAKLFNSFYNSS------SILKEEDKQVMDARILLAKKTAFVLKE 560

Query: 573 GLNIIGVESPNEM 585
           GL ++G+++ N M
Sbjct: 561 GLELLGIKTVNRM 573


>gi|312958530|ref|ZP_07773050.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311287073|gb|EFQ65634.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 578

 Score =  401 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 120/600 (20%), Positives = 240/600 (40%), Gaps = 73/600 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+LS+P G+ P  +AE
Sbjct: 5   IRQLIQQALTHLVNEGVLPEGLTPAIQVENTRDKTHGDFASNIAMMLSKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A +  D  V    IAG GFIN + +   L   L + +    + G    G+  +V ++
Sbjct: 65  KIIAALPADESVTKAEIAGPGFINFFQNTQALASRLDAALAD-AKIGARKAGEVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L  S+    +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDSVIRQNHVGDWGTQFGMLMASLQ---E 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +N+    E +Y     +    E     +  L   L   + + L +   +   + + 
Sbjct: 181 NPITSNELSDLENFYRAAKKRFDESEDFADRARGLVVKLQAGDAECLALWNRFRDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             ++  + LN++  +   + E  ++      + +++++L  +G + E       S   Q 
Sbjct: 240 HCQEIYELLNVKLTMADVMGESAYN----DDLINVVNDLKAKGLLVE-------SNGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             ++  +     T  G+ +   ++K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLEEFK-----TADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--- 416
           + + +++  VA         +++       +   DG P K   R G  + L  +++E   
Sbjct: 344 ALHFQQVFEVARRAGFVTHPMHMEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLNEAQD 401

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L +  +    F+F  +    + N   
Sbjct: 402 RAYNLVKEKNPELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAP 460

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R   +FR+    F +++  +               E +L   LA+   V+ + 
Sbjct: 461 YLLYAYTRVAGVFRKLGKDFSEVEGRIV---------LDAPHEQELAAKLAQLGEVLNSV 511

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLY++A +F   + +         + A++      RL+L       +  
Sbjct: 512 GEKGTPHILCTYLYEVAGLFSSFYENC------PILTADDEAQKQSRLRLAALAGRTLKQ 565


>gi|66912037|gb|AAH97633.1| LOC733251 protein [Xenopus laevis]
          Length = 650

 Score =  401 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 127/624 (20%), Positives = 244/624 (39%), Gaps = 78/624 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
            + A         ++         +     + +   +    G    N+AM +++ L    
Sbjct: 65  NINAQLQEVFGTAIRAA-----YPELQNAPLAVTPSQQPKFGDYQCNSAMGITQMLKAMN 119

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             + P  IA+ IV  I  +  V+ V IAG GFIN++L   +  K LS ++V+G++     
Sbjct: 120 QKVSPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDFTSKQLSKLLVNGVQPPV-- 177

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           I +  +V ++F S N    MHVGH R  ++G+++  L  F G++V R  ++ D G Q   
Sbjct: 178 IEEKKRVVVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFVGHDVLRLNHLGDWGTQFGM 237

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   Y          +E   +    ++   + K   I++
Sbjct: 238 LIAHLQDKFPDYLTISPPIGDLQSFYKESKKRFDEDEEFKKRAYQCVVQL-QNKTPDIIQ 296

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +   + ++ R + + +    DI I    E  +       +  ++     +G V     
Sbjct: 297 --AWNLICEVSRREFQKIYDNLDISIIDRGESFYQ----DRMIGVVKEFEEKGLVQVD-- 348

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFD 350
                        + ++++F     G  +   ++KSDG +TY  +DLA  K +  E   D
Sbjct: 349 -------------EGRKVVFPP---GCSIPLTIVKSDGGFTYDTSDLAALKQRLQEEKAD 392

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +IYV+ S  + +++ + +    +     ++  +      +       K   R+GD + L
Sbjct: 393 MLIYVIDSGQAIHMQNVFSAGQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRL 452

Query: 411 RHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             +++E                             V    +++  L         F F K
Sbjct: 453 IDLLEEGLKRSMDKLKDKGRDTVLTPEELLAAQRSVAFGCIKYADLSHNRMNDYIFSFDK 512

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           + +  + N   Y+ YAY R RSI R A       D DL       + +     E +L   
Sbjct: 513 MLD-DRGNTAAYLLYAYTRIRSIARLANIS----DDDLHKAAKETEVTLEHEKEWKLSKC 567

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  YLY+LA+ F   + +     + R       K+ M RL 
Sbjct: 568 ILRFPEILQKILEDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQ-TGQIIKVNMSRLL 626

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A A+++  G +I+G++   +M
Sbjct: 627 LCDAAAAVMAKGFDILGLKPVQKM 650


>gi|126698290|ref|YP_001087187.1| arginyl-tRNA synthetase [Clostridium difficile 630]
 gi|254974326|ref|ZP_05270798.1| arginyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091722|ref|ZP_05321200.1| arginyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255099825|ref|ZP_05328802.1| arginyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255305710|ref|ZP_05349882.1| arginyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255313450|ref|ZP_05355033.1| arginyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255516138|ref|ZP_05383814.1| arginyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649234|ref|ZP_05396136.1| arginyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260682408|ref|YP_003213693.1| arginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260686007|ref|YP_003217140.1| arginyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306519336|ref|ZP_07405683.1| arginyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123174390|sp|Q189Q7|SYR_CLOD6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115249727|emb|CAJ67544.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Clostridium difficile]
 gi|260208571|emb|CBA61255.1| arginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260212023|emb|CBE02575.1| arginyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 566

 Score =  401 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 131/615 (21%), Positives = 244/615 (39%), Gaps = 82/615 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   + N LKE   KI+   K     +IE P +   G  +      L++     P  
Sbjct: 1   MQDFKVAISNCLKE---KIEDLSKEEIEALIEVPPNKDMGDYAF-PCFKLAKVFRKAPNM 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTK 122
           IA  +   I+   ++  V   G G++N +++ S L + +   V+   E YG +  GK   
Sbjct: 57  IASELAESIEPSGEITKVIQLG-GYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKT 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P H+GH R  V+G+ L  +    GY+  R  ++ D G Q   L ++ F
Sbjct: 116 VIVEYSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYKTIRINHLGDYGTQFGKLIVA-F 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVG---KELADKYSSEL--LNFPEEKWLPIVKDYS 237
            ++ +      + +PE     V          E+ D+  +    L   +E+   + + + 
Sbjct: 175 KKWGEKEVVESNPIPELLKLYVRFHDEAEQHPEMEDEARAWFNKLENGDEEAQELWQWFR 234

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +++ +  R   K L+I+ D    E  +       +  +I+ L  +  + E       SK
Sbjct: 235 NESLKEFNRV-YKLLDIEFDSLAGESFY----SDKMNRVIELLEEKNLLKE-------SK 282

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +  D++  ++              + K+DGS  Y   DLA    + E   FD  IYV+
Sbjct: 283 GARIVDLEEYKM----------PPALITKNDGSTLYMTRDLAAAIYRKETYDFDKCIYVV 332

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD- 415
           GS  + + ++   V   +    A+  + +   +    +G    MS R G  + L   ++ 
Sbjct: 333 GSQQNLHFQQWFKVIELMGYDWAKDLIHVGFGMVALEEGT---MSTRKGRVVFLEDALNQ 389

Query: 416 ------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   +VG  +V F  L     +   F + +      E   
Sbjct: 390 AIDKTKEIILAKNPNAKNVDEISKQVGVGAVVFQELSNSRIKDYTFSWERTLSFDGE-TG 448

Query: 452 FYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            YVQY +ARC ++ R+A+ ++  D+D+ L            D    +++  +  + + I 
Sbjct: 449 PYVQYTHARCCAVLRKAEVEVTSDIDYSLLA----------DEDSAEVLRVIESFNKNIL 498

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP+ +  ++ DLA  F+  +           +   N ++   RL LV A    +
Sbjct: 499 LALKKNEPHIVTRFMLDLAQAFNKFYHDN-------PILVENLEIRKARLALVLATKQTL 551

Query: 571 NSGLNIIGVESPNEM 585
            + L ++G+ +P  M
Sbjct: 552 ENSLKLLGMHAPERM 566


>gi|306826468|ref|ZP_07459779.1| arginine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431327|gb|EFM34325.1| arginine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 563

 Score =  401 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 126/613 (20%), Positives = 248/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA++ A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + +++D L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDSRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|329116706|ref|ZP_08245423.1| arginine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907111|gb|EGE54025.1| arginine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 562

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 129/611 (21%), Positives = 254/611 (41%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + N + ++  +++ +  I    +IE P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLVANEIAKVVPELEQDTIIN---LIETPKNSEMGDLAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS-SIVVSGIEYGRNLIGKGTKVN 124
             +  +I  D   + V   G  +IN +L+ S + + +   ++    ++G+  IG G  + 
Sbjct: 58  SDLAEKINAD-QFEKVVAIGP-YINFFLNKSLISQDVMKDVITEKADFGQQHIGDGQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           ++  S N   P  VGH R  V+GD++ASL +  GY + R  ++ D G Q   L ++   W
Sbjct: 116 LDMSSPNIAKPFSVGHLRSTVIGDSIASLYSKLGYNLFRINHLGDWGKQFGMLIVAYKLW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
              +A+  +        Y  +  +   K   D+ + +    L   +++   + + +  ++
Sbjct: 176 GDPKAVEADPIAELLKLYVRINAEAEEKPELDEEARQWFKKLEDGDKEAWDLWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R   + LNI  D +  E  ++      + + +  L  +  +++       SK  +
Sbjct: 236 LVEFNRI-YEKLNITFDHYHGEAFYN----DKMDEGLQILEDKNLLHD-------SKGAK 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + KSDG+  Y   D+A    +     F   IYV+G +
Sbjct: 284 IVDLEKYNL----------PPALIKKSDGATLYITRDMATAMYRKRTFDFVKNIYVVGQE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  +++      + ++    K+S R G+ I           
Sbjct: 334 QSHHFKQLKAVLKEMGFDWSD-DMVHVSFGLVTKNKK--KLSTRKGNIILLEPTLDEAVS 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  +VG  +++F  L        DFD   +     E    YV
Sbjct: 391 RALTQIEAKNPDLENKEEVAKQVGIGAIKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR +SI R+A           F  +     S  DT   ++I  +  + + I+ A  
Sbjct: 450 QYAYARIQSILRKAN----------FTPDASANYSLKDTESWEIIKLIQAFSKTIQRAAE 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A Y   LA  F+ +++H         +  ++      RL L ++   ++   L
Sbjct: 500 KYDPSTIAKYAIQLAQAFNKYYAHTH------ILDESDE--RDSRLALCYSTGIVLKEAL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P +M
Sbjct: 552 RLLGVEAPEKM 562


>gi|77408152|ref|ZP_00784898.1| arginyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173252|gb|EAO76375.1| arginyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 563

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 129/584 (22%), Positives = 244/584 (41%), Gaps = 77/584 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P++ + G L+   A  L++ L   P  IA  I  +IK D   + V   G  ++N +
Sbjct: 26  LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVG-SYVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L  + +  ++L  ++  G  Y    IG+G  V I+  S N   P  +GH R  V+GD+LA
Sbjct: 83  LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  +  D     Y  +  +   
Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAEI 202

Query: 211 KELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               D+ + E     E    +   + + +  +++++  R     +N+  D +  E  ++ 
Sbjct: 203 DPSVDEEAREWFRKLEANDPEATELWQWFRDESLLEFNRL-YDKMNVTFDSYNGEAFYN- 260

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + ++++ L  +  + E                 +   +      G +    + KS
Sbjct: 261 ---DKMDEVLELLESKNLLVES----------------KGAQVVNLEKYGIEHPALIKKS 301

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   DLA    +     F   IYV+G++ S + K+L+AV   +    +  ++   
Sbjct: 302 DGATLYITRDLAAALYRKRTYDFAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSD-DMTHV 360

Query: 387 ELVRLYRDGMPIKMSKRAGDFI-------------------------TLRHVVDEVGSDS 421
               + + G   K+S R G+ I                             V   VG  +
Sbjct: 361 PFGLVTKGGA--KLSTRKGNVILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVGVGA 418

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           ++F  L    +   DFD   +     E    YVQYA+AR +SI R+A     + D     
Sbjct: 419 IKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYVQYAHARIQSILRKANFNPSNSD----- 472

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                  S  D    ++I  + ++PR+I  A    EP  +A +  +LA  F+ +++H R 
Sbjct: 473 -----NYSLNDVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYAHTR- 526

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   + +++  RL L +A A+++   L ++GV++PNEM
Sbjct: 527 ------ILDEDAEIS-SRLALCYATATVLKESLRLLGVDAPNEM 563


>gi|33239664|ref|NP_874606.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|39932096|sp|Q7VE03|SYR_PROMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33237189|gb|AAP99258.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 603

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 131/640 (20%), Positives = 252/640 (39%), Gaps = 95/640 (14%)

Query: 2   YLFADFSSRLKNYLK----EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            ++   + +++  L     E   ++K     L+  ++   +    G    N A+ L+R +
Sbjct: 3   NIYKSLNQQVQRALNTAFPEAASQVKESGDFLNPQLVAATK-PEFGDFQINGALALARII 61

Query: 58  GLDPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
              P  IAE+++ +++ +    ++     IAG GFINL L  + L   ++S +   +   
Sbjct: 62  KKSPRQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDLLGV 121

Query: 114 R-----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
                  +  K   V ++F S N    MHVGH R  ++GD++A ++ + GY+V R  ++ 
Sbjct: 122 PLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLNHVG 181

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L   +     +AL   +  +  G     Y K   +   D+Y  +        
Sbjct: 182 DWGTQFGMLITHLKEVAPKALTTANV-INLGNLVEFYKKAKQRFDEDEYFQQCSRNEVVN 240

Query: 229 WLPIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                K+   + + + +  R +   +  +  I ISE      +P  ++ +ID+L R G +
Sbjct: 241 LQRGNKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNP-FLQGVIDDLTRSGLL 299

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKC 343
            E                D  + +F + + G D   +   + K+DG + Y   DLA  + 
Sbjct: 300 VED---------------DGAKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRY 344

Query: 344 KYERGFD-----NMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGM 396
           + +   D      +IYV  S  + +   +  VA         ++I  +   LV+   DG 
Sbjct: 345 RLKDQPDGDGAGRIIYVTDSGQANHFAGVFQVAKRAKWLPSSSRIEHVPFGLVQ-GEDGK 403

Query: 397 PIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRFM 425
             K+  R+G+ + L+ ++DE                               +G  +V++ 
Sbjct: 404 --KLKTRSGETVRLKDLLDEAISRAKLDIERRLNEENRKESQAFIEKVSNTIGIAAVKYA 461

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +       F F ++    + N   Y+ YA  R   I R+  D+   ++   F     
Sbjct: 462 DLSQNRITNYQFSFDRMLAL-QGNTAPYLLYAVVRIAGINRKGGDLHSSVNKLNFS---- 516

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 +  E +LI  L ++  VI        P +L  YL++L+ VF+  +       ++
Sbjct: 517 ------EPQEWRLIRELLKFDEVIIAVEEELLPNRLCNYLFELSQVFNRFYD------QI 564

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++A        RL L       +  GLN++G+ +   M
Sbjct: 565 PVLKAEEPS-RSCRLALCQLTGDTLKKGLNLLGISTLERM 603


>gi|297621921|ref|YP_003710058.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377222|gb|ADI39052.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 576

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 136/593 (22%), Positives = 234/593 (39%), Gaps = 80/593 (13%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
            I I + +    GH   N AM L++ L + P  IA+ IV  +     ++ + IAG GFIN
Sbjct: 26  EIDIAQSKQEKFGHYQCNTAMRLTKQLHMPPREIAQRIVESVDKGDAIEKLEIAGPGFIN 85

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++LSP+Y+ K + ++  S       L  K  KV +EF S N    +HVGH R  ++GD L
Sbjct: 86  IFLSPAYIEKKVQTMAAS-PRLDIALPEKTEKVIVEFSSPNTAKELHVGHLRSTIIGDCL 144

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHV 209
           A +  F G++V R  ++ D G     L   +   + + L   +  DLP            
Sbjct: 145 ARVFEFLGHDVLRLNHVGDWGTAFGMLIAYLKLSHPEILTGEEETDLP------------ 192

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              L   Y +    F E+     +    V ++     D LKA  I         +  R  
Sbjct: 193 --HLVSWYKASKKQFDEDPGFKKISQLEVVSLQGGESDSLKAWEIIC-------EISRRS 243

Query: 270 PSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLF---RSTMVGDDVD 321
              I +++D  +  +G  Y   + P   +   + ++    +  + +F        G  + 
Sbjct: 244 YQEIYNLLDVAIEERGESYYNPVLPELIEELDQKELIEISEGAKCIFIPEFCNREGSPMP 303

Query: 322 RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE---K 377
             + KSDG + Y   D+A  K +  E   D +I V  +  + + K + A +         
Sbjct: 304 LMVQKSDGGFGYDTTDMAAMKQRVQEEKADRIIIVTDAGQALHFKLVYAASVKAGYLDPD 363

Query: 378 KAQINVLLCELVRLYRDGMPIK-----------------------MSKRAGDF--ITLRH 412
           K + + +   LV L  DG   +                       M++R  D        
Sbjct: 364 KVRFDHVTFGLV-LGADGKKFRTRSGEVERLIDLIYTAIDKAREIMAERNPDMPQEQREK 422

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +   +G  ++++  L    +    F + ++  + + N   ++ YAY R   I R+     
Sbjct: 423 IARALGIGAIKYADLSCHRTGDYTFSYDRML-RFEGNTAAFLMYAYVRIAGIKRK----- 476

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D D     +    S    SE+ L +HLA++   ++       P +L+ YLY LA  F
Sbjct: 477 IGADIDALQAAI----SLKHPSEMALGLHLAQFNEALQQVAEDLLPNRLSDYLYTLAEKF 532

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +            Q         RL L  A A I+  GL+++GVE+  +M
Sbjct: 533 NAFYRDC---------QVEGAPEQNSRLLLCEATARILKQGLHLLGVETVEKM 576


>gi|330723522|gb|AEC45892.1| arginyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 533

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 170/580 (29%), Positives = 290/580 (50%), Gaps = 52/580 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++   +K++  KI         +V+   +  +H   STN AM+++    LD +  A  +V
Sbjct: 2   QIDEQIKQVLQKIINNFGYEANVVLTPSK--SHADYSTNLAMVVASKYKLDVIDFATKVV 59

Query: 70  ARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I  D      + +   GFIN ++S +    I+++I++ G  +    + +    N+EFV
Sbjct: 60  EQIDKDKLFLTKIEVVKPGFINFFVSNTSYANIVNNIILEGENFA--NLKQNKVYNVEFV 117

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +H+GH R A +G TLA+++  +G +V REYYIND G QI+ LA S+F RYQQ 
Sbjct: 118 SANPTGYLHLGHVRSAAIGATLANVLEHAGNKVIREYYINDNGVQIDNLAKSLFARYQQ- 176

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           ++N +  +PE  Y G  +    +++ D  K   +  +   E  L   K+   +  ++ I+
Sbjct: 177 IFNPNFAMPEDGYFGQDIIWAAQQVFDLVKDKYQQKSLENEGVLSFFKETGTKIFLEEIK 236

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL  + I  D+F SE   ++     I +++ +L    + Y+                  
Sbjct: 237 KDLAQIGIHFDVFSSEKKLYQ--DKKIDNLLSSLK---HTYK----------------KD 275

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVK 365
             L   +T  GDD DR L+K DG+YTYF  D+ Y   K +    D +I V G+DH GYV+
Sbjct: 276 DALWLETTKFGDDKDRVLIKQDGTYTYFTPDITYHLQKLQSNNPDKLINVWGADHIGYVQ 335

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R+++  + +     +++ L+ +LV+L ++   +KMSKR G   TL+ +++    D++R+ 
Sbjct: 336 RMKSALSILGY-PNKVDFLIYQLVKLIKNNQELKMSKRRGTSFTLKDLLELCSKDAIRYF 394

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           M+ R  +  LDFD  +  + S +NPV+ +QY+YAR   +  +++                
Sbjct: 395 MINRSENTNLDFDLDQANQISDQNPVYIIQYSYARIAQLLLKSEIKEYQAT--------- 445

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              S F+ +E++LI  L E+  +I   T   +   L  YL +LA  F+  +S+ +     
Sbjct: 446 ---SFFEENEIKLINILKEFNEIIATITKNYKINLLNQYLLNLAKTFNSFYSNSKI---- 498

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                N + L    L LV A   I+  GL +IGV     M
Sbjct: 499 -IGNPNEKNL----LALVKATGIILKIGLKLIGVSIKERM 533


>gi|330501487|ref|YP_004378356.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328915773|gb|AEB56604.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 579

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 121/599 (20%), Positives = 230/599 (38%), Gaps = 70/599 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  +   +   I +E  +D +HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRHLIQQALDRLTAEGVLPAGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  +  V IAG GF+N + +   L + L + +    + G    G   +V ++
Sbjct: 65  KLIAALPADEQITKVEIAGPGFLNFFQNSDVLAQHLEAALAD-AKLGVRKSGPTQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L L+      
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDWGTQFGML-LAYMQENP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A  +  +DL   Y           E AD+    ++     + + L +   ++  + +  
Sbjct: 183 AAAESELADLEGFYRAAKKRFDESPEFADRARELVVQLQAGDAECLRLWHRFNDIS-LSH 241

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +     E  ++      +  ++ +L  +G + E           Q  
Sbjct: 242 CQALYDRLGVKLSMADVKGESAYN----DDLPQVVADLEAKGLLTE-------DNGAQCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            MD  +        G+ +   + K+ G Y Y   DLA  + +      D ++Y +    +
Sbjct: 291 FMDEFK-----NAEGNPLPLIVQKAGGGYLYATTDLAATRYRANALKADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + + + A A       A + +       +   DG P K   R G  + L  ++DE    
Sbjct: 346 LHFQMVFACARLAGFVPASMEMEHMGFGTMNGPDGRPFK--TRDGGTVKLVQLLDEAEQR 403

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  SV++  L +  +    F+F  +    + N   Y
Sbjct: 404 AYSLVKDKNPELAEDELRQIARVVGIASVKYADLSKHRTSDYSFNFDLMLSF-EGNTAPY 462

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R  SIFR+      ++           Q +     E  L   LA++  ++ N  
Sbjct: 463 LLYAYTRVASIFRKLGKGVDEIGG---------QITLVADQEQALAGKLAQFNELLGNVA 513

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               P+ L  YLYD+A +F   + +         + A +      RL+L       +  
Sbjct: 514 DKGTPHMLCAYLYDIAGLFSSFYENC------PILAAEDEATRNSRLRLAALTGRTLKQ 566


>gi|254786912|ref|YP_003074341.1| arginyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511658|sp|C5BNG6|SYR_TERTT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|237687266|gb|ACR14530.1| arginine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 578

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 129/616 (20%), Positives = 254/616 (41%), Gaps = 69/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    + R+++ + ++     +       + I   +    G    N AM  ++ +  +
Sbjct: 1   MNIRKFLADRVRSAMSDV----GIPNDYSPHLAI--SKKPGFGDYQANGAMAAAKAMKTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ IV  + +    + V IAG GFIN++L  ++L + L+    S          + 
Sbjct: 55  PRELAQSIVDSLDLSGVAEKVEIAGPGFINIHLENAWLARQLAES-SSTANLAAQTEQEA 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD LA ++ F+G +V R+ ++ D G Q   L   
Sbjct: 114 QTVVVDYSSPNLAKEMHVGHLRSTIIGDCLARILEFNGDKVIRQNHVGDWGTQFGMLIAE 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +          +D D P+     +       + A  +      F  +    +V+  S   
Sbjct: 174 L------ETQLSDGDKPDFALKDL---ESFYQKAKAHFDTDAAFATKARDYVVRLQSGDQ 224

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  + +  K ++++H    SE+ +   + +     +   +        ++   K++   
Sbjct: 225 HILNLWESFKRVSLKH----SEEIYSLLNVTLGPQDVRGESAYNDDLAAVVSELKAQGLA 280

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
             D D  Q++F    +   GD     + K DG Y Y   DLA  + +  E   D ++Y +
Sbjct: 281 VED-DGAQVVFLQELADKNGDPSPVIVQKKDGGYLYSTTDLAALRYRTGELAADRILYFI 339

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S +++++  VA   +     +++        +  DG P K   R+G  + L  +++
Sbjct: 340 DARQSLHMQQVFTVARKANFVNEWVSLEHHPFGTMMGADGKPFK--TRSGGTVKLAELLE 397

Query: 416 E--------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           E                          VG  ++++  L +  +    F++  +    + N
Sbjct: 398 EAVERASQVVAANSELDAQEAADIARKVGIGAIKYADLSKTRTNDYVFNWDAMLSF-EGN 456

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY R +SIFR+A     DLD + F  ++    + ++  E  L +   ++  V+
Sbjct: 457 TGPYLQYAYTRIKSIFRKA-----DLDLESFAADL----NIYEAQEKALALKTLQFAEVV 507

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E       P+ L  YLYDL+S+F   +      P L+     +      RL L  +VA  
Sbjct: 508 EQVASEALPHVLCNYLYDLSSLFMTFYEAC---PILKSDVPED--TRNSRLVLSASVAKT 562

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+E    M
Sbjct: 563 LALGLDLLGIEVMERM 578


>gi|315127467|ref|YP_004069470.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015981|gb|ADT69319.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 580

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 240/617 (38%), Gaps = 69/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  +  +      E          RP+    G    N AM  ++ +  +
Sbjct: 1   MNIRTIL---VEKAIAAMTAAGLPEDTNPAVTQSTRPQ---FGDYQINGAMGAAKKMKSN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+ ++ +    +   IAG GFIN++L P +L + + +   +  +   N   K 
Sbjct: 55  PRELAQKIIDQLDVSDIAEKTEIAGPGFINIHLKPEFLAQSVQA-ANNHAKLAVNEHTKP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +++ S N    MHVGH R  ++GD +   + F G  V R+ ++ D G Q   L   
Sbjct: 114 QKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHMGDWGTQFGMLIAH 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  Q +  +   L +               A K   +   F ++    +VK     A
Sbjct: 174 LEDQINQGVDLDTVALAD--------LETFYRDAKKRFDDEEGFADKARNYVVKLQGGDA 225

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +     A +++H    SE+ + R + +     I   +        I+   K K   
Sbjct: 226 HCEKLWKLFIATSVKH----SEEVYKRLNVTLTPADIMAESAYNSELNDIISLLKDKNIA 281

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
             +    Q++F    +   G+     + KS G + Y   DLA    +  + G + ++  +
Sbjct: 282 -VESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S +  ++E  A      + + +   C     +  DG P K   R G  + L  +++
Sbjct: 341 DARQSLHFNQVELTARKAGLLRDETSYEFCPFGTMMGADGKPFK--TRTGGTVKLADLLE 398

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    F++  +    + 
Sbjct: 399 ESITRAAAKLAERESDLSDEDRSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSF-EG 457

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               Y+QYAY R RSIFR++      L  D+         S  +  E  L + L +   V
Sbjct: 458 ATAPYLQYAYTRVRSIFRKSGVDAASLKADV---------SIIEPQEKTLALKLLQLEEV 508

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++       P+ L  YLY+LAS++   +      P L+  +     +   RL L + VA 
Sbjct: 509 LDLMINEATPHVLCGYLYELASLYMTFYEAC---PVLK--EGVEPSVRDSRLVLCNLVAD 563

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+++G+E   +M
Sbjct: 564 TLRTGLDLLGIEVMEQM 580


>gi|300867420|ref|ZP_07112075.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300334610|emb|CBN57243.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 581

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 135/599 (22%), Positives = 238/599 (39%), Gaps = 80/599 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           +N +  I      +    D +++    +   G    NAAM L++ LG  P  IA  I+  
Sbjct: 6   QNLIGAIIAAFGEDLAGTDPMLVLAS-NPKFGDYQCNAAMSLTKKLGKPPRAIASAIIEN 64

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           + +    ++  IAG GFINL L P YL   +++ + +    G        +V I+F S N
Sbjct: 65  LDVADLCETPTIAGPGFINLTLKPEYLEGEVNA-IANNPRLGIAPTKTPQRVAIDFSSPN 123

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
               MHVGH R  ++GD LA ++ F G++V R  ++ D G Q   L   +   Y +AL  
Sbjct: 124 IAKEMHVGHLRSTIIGDCLARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPEALTT 183

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------DYSVQAMMK 243
            D+ L  G     Y K      A K   E   F E     +V+          +   + +
Sbjct: 184 ADA-LDLGDLVDFYRK------AKKRFDEDETFKETARQEVVRLQAGAEDTRRAWNLLCE 236

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R + + +    DI ++E      +P  +  ++++L + G + E           +   
Sbjct: 237 QSRREFQVIYDLLDIKLTERGESFYNP-LLPGVVEDLTKLGLLVE-------DNGAKCVF 288

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           ++       +   G+ +   + KSDG + Y   DLA  + + E+ G + +IYV  S  + 
Sbjct: 289 IEG-----FTNKEGEPLPLIVQKSDGGFNYATTDLAALRYRIEKDGANRLIYVTDSGQAN 343

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           +  +   VA         + ++     + L  DG   K   R+G+ + LR ++DE     
Sbjct: 344 HFAQFFQVARKAGWIPDDVEIVHVPFGLVLGEDGKKSK--TRSGETVRLRDLLDEAIVRS 401

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     +G  +V++  L +  +    F + K+ +  K N 
Sbjct: 402 RADLEKRLQEEKREETEEFIANVAKVIGLSAVKYADLSQNRTSNYTFSYDKMLDL-KGNT 460

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAY R + I R+ +  F +L  D        +    + +EL L  HL +   V+ 
Sbjct: 461 APYLLYAYVRVKGIGRKGEINFDNLGADA-------KVILKEDAELVLAKHLLQLSEVVG 513

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                  P ++  YL++L+  F+  +      P L+    +   L   RL L    A  
Sbjct: 514 AVEGDLLPNRICQYLFELSQKFNQFFEQC---PVLK----SEEPLRTSRLVLCDLTAKT 565


>gi|304372891|ref|YP_003856100.1| Arginyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309082|gb|ADM21562.1| Arginyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
          Length = 533

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 168/580 (28%), Positives = 289/580 (49%), Gaps = 52/580 (8%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++   +K++  KI         +V+   +  +H   STN AM+++    LD +  A  +V
Sbjct: 2   QIDEQIKQVLQKIINNFGYEANVVLTPSK--SHADYSTNLAMVVASKYKLDVIDFATKVV 59

Query: 70  ARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I  D      + +   GFIN ++S +    I+++I++ G  +    + +    N+EFV
Sbjct: 60  EQIDKDKLFLTKIEVVKPGFINFFVSNTSYANIVNNIILEGENFA--NLKQNKVYNVEFV 117

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +H+GH R A +G TLA+++  +G +V REYYIND G QI+ LA S+F RYQQ 
Sbjct: 118 SANPTGYLHLGHVRSAAIGATLANVLEHAGNKVIREYYINDNGVQIDNLAKSLFARYQQ- 176

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           ++N +  +PE  Y G  +    +++ D  K   +  +   E  L   K+   +  ++ I+
Sbjct: 177 IFNPNFAMPEDGYFGQDIIWAAQQVFDLVKDKYQQKSLENEGVLSFFKETGTKIFLEEIK 236

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            DL  + I  D+F SE   ++     I +++ +L    + Y+                  
Sbjct: 237 KDLAQIGIHFDVFSSEKKLYQ--DKKIDNLLSSLK---HTYK----------------KD 275

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVK 365
             L   +T  GDD DR L+K DG+YTYF  D+ Y   K +    D +I V G+DH GYV+
Sbjct: 276 DALWLETTKFGDDKDRVLIKQDGTYTYFTPDITYHLQKLQSNNPDKLINVWGADHIGYVE 335

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R+++  + +     +++ L+ +LV+L ++   +KMSKR G    L+ +++    D++R+ 
Sbjct: 336 RMKSALSILGY-PNKVDFLIYQLVKLIKNNQELKMSKRRGTSFALKDLLELCSKDAIRYF 394

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           M+ R  +  LDFD  +  + S +NPV+ +QY+YAR   +  +++                
Sbjct: 395 MINRSENTNLDFDLDQANQISDQNPVYIIQYSYARITQLLLKSEIKEYQAT--------- 445

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              S F+ +E++LI  L E+  +I   T   +   L  YL +LA  F+  +S+ +     
Sbjct: 446 ---SFFEENEIKLINILKEFNEIIATITKNYKINLLNQYLLNLAKTFNSFYSNSKI---- 498

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                N + L    L LV A   ++  GL +IGV     M
Sbjct: 499 -IGNPNEKNL----LALVKATGIVLKIGLKLIGVSIKERM 533


>gi|91201635|emb|CAJ74695.1| similar to arginyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 565

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 139/605 (22%), Positives = 248/605 (40%), Gaps = 77/605 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           K  +  +  K  + +  +D+  IE P D   G  +      LS+ L   P  IA  +   
Sbjct: 7   KTIVSLLAAKTNLSEDEIDKY-IEIPPDPKMGDYAF-PCFSLSKMLKKPPAKIASELADL 64

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           +     ++ +   G  ++NL+L  + +   +L  IV  G  YG + IGKG  V I++ S 
Sbjct: 65  LHPVSPINKIEATGP-YLNLFLDKAIFSAVVLKKIVNEGDTYGCDTIGKGKTVVIDYSSP 123

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQAL 189
           N    + V H R A++G+ L ++    GY+     ++ D G Q   L ++   W  +   
Sbjct: 124 NIAKHLAVHHLRSALIGNALYNIYGNLGYKCIGINHLGDWGTQFGQLIVAYRKWGEKDLE 183

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRD 247
            +  +DL + Y            L D+           + + + + + +   ++ +  R 
Sbjct: 184 QHTITDLNKLYVTFHREAEKDNHLEDEAREWFKKLEAGDAEAMELWERFKDISLKEFQRI 243

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             K L I  D F+ E  ++    + + D +  + ++G           S+     +++  
Sbjct: 244 -YKMLGIHFDAFVGESFYN----TMVEDTVSGIKKKGLAC-------ISEQALIVNLEAY 291

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKR 366
            +              L K DG+  Y   D+A  + +     F+ MIYV+GS+   +  +
Sbjct: 292 NM----------PPCLLRKKDGTTLYATRDIAAAEYRKSVYDFEKMIYVVGSEQKLHFCQ 341

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416
           +  V   +    A   V +   +  +++G   KMS R G  I L  ++ E          
Sbjct: 342 IFKVLELMGYDWASQCVHVDFGLMKFKEG---KMSTRKGRVILLEDLLIEAVDRIKRIIE 398

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          VG  +V F  L  K ++ + FD+  V     E    YVQY +AR 
Sbjct: 399 EKNPLLKDKEMVARDVGIGAVIFADLSTKRNKDVIFDWDTVLNFEGE-TGPYVQYTHARL 457

Query: 462 RSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            SI R+  KD+  D+D+ L            +   + LI +L +YP V+  A    EP  
Sbjct: 458 CSILRKYGKDVTTDIDYPLLN----------EDDAIHLIKNLWQYPFVVLKAAQFYEPSL 507

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           ++ YL D+ +  +  ++  R       V + +  LT  R+ LV A   II +GL I+G++
Sbjct: 508 VSNYLIDICAGVNKFYNAHR-------VLSEDEGLTKARILLVDAARQIIKNGLKILGMQ 560

Query: 581 SPNEM 585
           +P EM
Sbjct: 561 APVEM 565


>gi|170719563|ref|YP_001747251.1| arginyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558809|sp|B1J2I3|SYR_PSEPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169757566|gb|ACA70882.1| arginyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 578

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 115/598 (19%), Positives = 236/598 (39%), Gaps = 69/598 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +    D+    IAG GF+N + +   L   L + +      G    G   KV I+
Sbjct: 65  KLIAALPASADISKAEIAGPGFLNFFQNTDALANRLDAALAD-AHLGARKAGPAQKVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD++A ++ F G +V R+ ++ D G Q   L   + +  +
Sbjct: 124 MSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDQVIRQNHVGDWGTQFGML---LAYLEE 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMK 243
             + +++    E +Y     +    E     +  L   L   +   + +   +   + + 
Sbjct: 181 NPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPDCMALWTRFKDIS-LS 239

Query: 244 IIRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +   + LN++  +   + E  ++    + + +++ +L  +G + E        +  Q 
Sbjct: 240 HCQKTYELLNVKLTMADVMGESAYN----ADLANVVADLKAKGLLVE-------DQGAQC 288

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
             ++  +        G+ +   + K+DG Y Y   DLA  + +      D  +Y +    
Sbjct: 289 VFLEEFK-----NSEGEPLPVIVQKADGGYLYATTDLAAVRYRSNVLKADRALYFVDQRQ 343

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKM-------SKRA 404
           + +  ++  VA         + +       +          RDG  +K+        +RA
Sbjct: 344 ALHFNQVFEVARRAGFVGHPMQMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAKERA 403

Query: 405 GDFITL----------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              +            RH+ + VG  +V++  L +  +    F+F  +    + N   Y+
Sbjct: 404 YALVKEKNPSLAEDELRHIGEVVGIGAVKYADLSKHRTSDYSFNFELMLNF-EGNTAPYL 462

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            YAY R   +FR+    F +++  +  +            E  L   LA++  ++ N   
Sbjct: 463 LYAYTRVAGVFRKLGKGFDEVEGHIVLQAA---------HEQDLAARLAQFGEILNNVAD 513

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
              P+ L  YLYDLA +F   + +         + A   +    RL+L       +  
Sbjct: 514 KGTPHVLCTYLYDLAGLFSSFYENC------PILAAETPEQQQSRLRLAALTGRTLKQ 565


>gi|71894371|ref|YP_278479.1| arginyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851159|gb|AAZ43768.1| arginyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 551

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 166/595 (27%), Positives = 290/595 (48%), Gaps = 54/595 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV--IERP-------RDCAHGHLSTNAAM 51
           M L++   + + N L ++  K  + +  LD I   I +P        +    H STN A 
Sbjct: 1   MTLYSQIKNSILNSLTKLQAKEILPEFDLDEINFNISQPNIPEKFNPNNIFYHYSTNIAF 60

Query: 52  ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111
            L++ L  +P+ +A+ I + +  +   + V     GFINL +   Y    +  I+     
Sbjct: 61  TLAKSLKTNPIELAKNIQSELLQEDLYERVDFIAPGFINLVVKDIYFNNAIYEIIKLKNN 120

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +G+       K+NIE+VSANPTG +HVGH R AVVG  + +++ F+GY V  EYY+N+AG
Sbjct: 121 FGKFKA-NNQKINIEYVSANPTGFLHVGHVRGAVVGKVIYNVLKFAGYSVEGEYYVNNAG 179

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWL 230
            QIN LA SV + Y + L+   S   E  Y G  +    K++   + ++ +   E  K  
Sbjct: 180 NQINLLARSVLYWYLK-LHKISSPKVEDGYNGKDILLCAKKIKKVFGNKFIKLKESHKLF 238

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
              K +S + + + I  DL  L I  D    E   +  + S I  +++ L  + Y     
Sbjct: 239 ADFKKFSYEILFEEILKDLWKLKINFDSVFYESSLY--ENSDIEKVLEKLKNKTY----- 291

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                         D   L+ +++  GDD DR L+KSD S+TYF  D+AY   K+++  D
Sbjct: 292 -------------QDGNSLVLKTSEYGDDKDRVLVKSDKSFTYFLPDIAYHYLKFKK-AD 337

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I + G+DH GY++R++A    ++   + +++L  +LVRL ++G   KMSKR G  +TL
Sbjct: 338 KLINIWGADHLGYIQRIKAAMHFLNLNDSNLDILTLQLVRLIKNGQEFKMSKRKGTSVTL 397

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           + ++     DS+ F ML R ++   DFD  K       NPV+ V+Y+Y+R  S+ +    
Sbjct: 398 KDLLKVSNKDSIFFGMLLRDSNSKYDFDIDKNNASDINNPVYIVKYSYSRAYSLSQN--- 454

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                      ++   +E+       +L++ L  +  +I   T   +P  L  YL +LA+
Sbjct: 455 ---------LAKHQKTKEAFLSDKAKKLVLELDFFQELISVITKTLKPNLLTQYLINLAN 505

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F+  +S  +       ++  + +       L+ A   ++++ L ++ ++ P +M
Sbjct: 506 LFNSFYSEKK-------IKDTSEEKHYS--GLIQAYKIVLSNALKLLNIKPPKKM 551


>gi|326407574|gb|ADZ64645.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 564

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 134/611 (21%), Positives = 249/611 (40%), Gaps = 79/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L      +   ++I    +IE+P+    G L+   A  L++ L   P  IA
Sbjct: 2   DEKQLVSQALSAAIDGVLGVEQIAA--IIEKPKSSDLGDLAFP-AFQLAKTLRKSPQIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      + V   G  ++N +L  +    +++  ++  G  YG   IG+G  V 
Sbjct: 59  GEIAEKIDTKG-FEKVIAVGP-YVNFFLDKNATASEVIREVLTEGEHYGDANIGQGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  + N   P  +GH R  V+GD++A +    GY+  +  ++ D G Q   L  +   +
Sbjct: 117 IDMSAPNIAKPFSIGHLRSTVIGDSIAKIYEKLGYQPIKINHLGDWGKQFGLLITAYKKY 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             +  +  N  D     Y  +  +       D+   +    +   +E+ L I K +S  +
Sbjct: 177 GDEATITANPIDELLKLYVKINAEAKEDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R   + L +  D F+ E  +       +  I+++L  +  ++E       SK   
Sbjct: 237 LIEFNRI-YRKLGVSFDHFMGESFY----SDKMDAIVEDLESKNLLHE-------SKGAL 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    + +   F   +YV+G +
Sbjct: 285 IVDLEKYNL----------NPALIKKTDGATLYITRDLATAAYRKKTFNFVKSLYVVGGE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K+L+AV        +  +++      + + G   K S R G  + L   +DE   
Sbjct: 335 QTNHFKQLKAVLKEAGYDWSD-DMVHVPFGMVTQGGK--KFSTRKGHVVKLEMALDEAVD 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V+F  L    +   DFD  ++     E    YV
Sbjct: 392 RAEKQIEAKNPNLENKEEVAKQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A      +D +     V       D    +++  L E+P V++ A  
Sbjct: 451 QYAHARIQSILRKA---NRKVDINNISLAV------SDAEAWEIVKALKEFPNVVKRAAD 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ +++H R       +  ++ +L   RL L+ A + ++   L
Sbjct: 502 NYEPSVIAKYAISLAQAFNKYYAHVR-------ILEDDAQL-DGRLALISATSIVLKEAL 553

Query: 575 NIIGVESPNEM 585
            ++GV +P  M
Sbjct: 554 RLLGVAAPENM 564


>gi|72091995|ref|XP_781259.1| PREDICTED: similar to Arginyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
 gi|115958557|ref|XP_001191024.1| PREDICTED: similar to Arginyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
          Length = 665

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 126/627 (20%), Positives = 250/627 (39%), Gaps = 83/627 (13%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
            +    +   +  L+     +         + ++  +    G    N+AMI+++ L    
Sbjct: 79  NVCGKLTEIFRTALR-----VAYPALTNAPVAVQPSQVEKFGDYQCNSAMIIAQQLKAQG 133

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             + P  +A+ I A I  +  ++ V IAG GFIN++L  S++  +++ I+  G+      
Sbjct: 134 SPVSPRVVAQQIQANIPSNDVIEKVDIAGPGFINIHLKKSFITPLVTGILTQGVLPP--P 191

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           + K  KV I+  S N    MH+GH R  ++G++++ LM F G++V +  ++ D G Q   
Sbjct: 192 LSKKRKVVIDMSSPNIAKEMHIGHLRSTIIGESISRLMEFVGHDVLKVNHLGDWGTQFGM 251

Query: 177 LALSVFWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L N    + +   +Y    ++  G E   K + +++   +     I+K
Sbjct: 252 LITHLADQFPNYL-NESPPIQDLQKFYKESKVRFDGDEEFKKRAYKMVVRLQGGEPSIIK 310

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFI----SEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             + + +  I + +   +  + D+       E  +       +  ++  L   G++    
Sbjct: 311 --AWELICDISKTEFNKIYARLDVKNLIPRGESFYQE----RMNVVVQKLEAGGHLEFD- 363

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGF 349
                         D ++++F        V   ++KSDG YTY  +D+A    + +E   
Sbjct: 364 --------------DGRKIMFTPDSA---VPLTIVKSDGGYTYDTSDMATLYQRVHEDKG 406

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCEL-VRLYRDGMPIKMSKRAGDF 407
           + +IYV+ +  + +   + +    +       + +      V L  D    K   R+GD 
Sbjct: 407 ERLIYVVDAGQATHFDAIFSGCRKLGWYDPNNVRIEHVSFGVVLGEDKK--KFKTRSGDV 464

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           + L  ++DE                             V    +++  L  + +    F 
Sbjct: 465 VKLVSLLDEGLRRSLETLKEKGRDKVLTAEELKAAQESVAYGCIKYADLSHRRTNDYIFS 524

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           F K+ E  K N   Y+ YAY R RSI R+A ++  +   +      IP E      E +L
Sbjct: 525 FDKMLE-DKGNTAVYLLYAYTRIRSISRKA-EVLAETLKEAAKTTSIPVEH---PKEWKL 579

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              LA +P VI         + +  YLY++A+ F   +       + +        +   
Sbjct: 580 AKCLARFPEVISRTLDDLFIHGICDYLYEVANTFTEFYEVCYCIVKNKQ-TGEIESVDTG 638

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A A+I+    +I+G+    +M
Sbjct: 639 RLLLCEATAAIMAKCFDILGLHPVEKM 665


>gi|255654755|ref|ZP_05400164.1| arginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449501|ref|ZP_06891278.1| arginine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878176|ref|ZP_06902191.1| arginine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261565|gb|EFH08383.1| arginine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430929|gb|EFH16761.1| arginine--tRNA ligase [Clostridium difficile NAP07]
          Length = 566

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 130/615 (21%), Positives = 243/615 (39%), Gaps = 82/615 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   + N LKE   KI+   K     +IE P +   G  +      L++     P  
Sbjct: 1   MQDFKVAISNCLKE---KIEDLSKEEIEALIEVPPNKDMGDYAFP-CFKLAKVFRKAPNM 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTK 122
           IA  +   I+   ++  V   G G++N +++ S L + +   V+   E YG +  GK   
Sbjct: 57  IASELAESIEPSGEITKVIQLG-GYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKT 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E+ S N   P H+GH R  V+G+ L  +    GY+  R  ++ D G Q   L ++ F
Sbjct: 116 VIVEYSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYKTIRINHLGDYGTQFGKLIVA-F 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVG---KELADKYSSELLNFP--EEKWLPIVKDYS 237
            ++ +      + +PE     V          E+ D+  +        +E+   + + + 
Sbjct: 175 KKWGEKEVVESNPIPELLKLYVRFHDEAEQHPEMEDEARAWFAKLENGDEEAKELWQWFR 234

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +++ +  R   K L+I+ D    E  +       +  +I+ L  +  + E       SK
Sbjct: 235 DESLKEFNRV-YKLLDIEFDSLAGESFY----SDKMNRVIELLEEKHLLKE-------SK 282

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +  D++  ++              + K+DGS  Y   DLA    + E   FD  IYV+
Sbjct: 283 GARIVDLEEYKM----------PPALITKNDGSTLYMTRDLAAAIYRKETYDFDKCIYVV 332

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD- 415
           GS  + + ++   V   +    A+  + +   +    +G    MS R G  + L   ++ 
Sbjct: 333 GSQQNLHFQQWFKVIELMGYDWAKDLIHVGFGMVALEEGT---MSTRKGRVVFLEDALNQ 389

Query: 416 ------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   +VG  +V F  L     +   F + +      E   
Sbjct: 390 AIDKTKEIILAKNPNAKNVDEISKQVGVGAVVFQELSNSRIKDYTFSWERTLSFDGE-TG 448

Query: 452 FYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            YVQY +ARC ++ R+A+ ++  D+D+ L            D    +++  +  + + I 
Sbjct: 449 PYVQYTHARCCAVLRKAEVEVTSDIDYSLLA----------DEDSAEVLRVIESFNKNIL 498

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP+ +  ++ DLA  F+  +           +   N ++   RL LV A    +
Sbjct: 499 LALKKNEPHIVTRFMLDLAQAFNKFYHDN-------PILVENLEIRKARLALVLATKQTL 551

Query: 571 NSGLNIIGVESPNEM 585
            + L ++G+ +P  M
Sbjct: 552 ENSLRLLGMHAPERM 566


>gi|255526642|ref|ZP_05393548.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186101|ref|ZP_06854506.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509675|gb|EET86009.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296049369|gb|EFG88798.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 563

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 250/617 (40%), Gaps = 86/617 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      + R+K ++       +++ + LD+ +IE P     G  +      LS+ L   
Sbjct: 1   MNYKKLVAERIKEHV-------ELDLETLDK-LIEIPPKSDMGDYAFP-CFQLSKTLRKA 51

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGK 119
           P  IAE +  +I  D + + +   G  ++N ++    + +  +  ++ +G +YG + IG 
Sbjct: 52  PNAIAEELKEKINKD-NFEKIENLGP-YLNFFVDKIDFTKNTIEKVLENGDKYGSSDIGT 109

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + I++ S N   P HVGH     +G+ L  +++F GY      ++ D G Q   L  
Sbjct: 110 GKNITIDYSSPNIAKPFHVGHLCSTSIGNALYRILSFQGYNCIGINHLGDWGTQFGKLI- 168

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE---LADKYSSELLNFPE--EKWLPIVK 234
           S + R+          + E     V      ++   L D+      N  +  E+   + +
Sbjct: 169 SAYKRWCDEEVLEKEPIKELLRIYVKFHEEAEKDTSLEDEARLHFKNLEDGCEEETKLWQ 228

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +     +K  +     L I+ D +  E  ++      +  +ID + ++G + E      
Sbjct: 229 RFK-DLSLKEFKVVYDMLGIKFDYYTGESFYN----DKMDAVIDEIDKKGLLVE------ 277

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            S   +   +D   +              + K+DG+  Y   DLA    + +   F   I
Sbjct: 278 -SNGAKVVMLDEYNM----------PPCIIKKADGATIYATRDLAAATYRKKTYDFYKSI 326

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+GSD S + K+L      +    A     +   +  + D    K+S R GD I L  +
Sbjct: 327 YVVGSDQSLHFKQLFTTLKLMGHDWADDCKHVAFGLVRFADK---KLSTRKGDVIFLEDL 383

Query: 414 VDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           ++E                         +G  +V F  L     + + FD+ ++     E
Sbjct: 384 LNESVEKTLEVINEKNPDLENKEEVSKKIGIGAVIFTYLKNNREKDIIFDWKEILSFDGE 443

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               YVQY+YAR +SI R+A ++  D+D+                 E +L+  L  + + 
Sbjct: 444 -TGPYVQYSYARGKSILRRAGEVEGDIDYSKLNSK----------EEFELVKTLEGFQKS 492

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A    EPY +  Y+ D+A  F+  ++          + A +    + R++LV A   
Sbjct: 493 ILYAIDKLEPYIVTRYIIDVAKGFNKFYNAH------SIMNAEDEATKIARIKLVEATCQ 546

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +GLN+IG+E+  +M
Sbjct: 547 VLKNGLNLIGIETVEKM 563


>gi|332307387|ref|YP_004435238.1| arginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174716|gb|AEE23970.1| arginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 578

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 137/619 (22%), Positives = 238/619 (38%), Gaps = 75/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     ++ +  L  I               + R      G    N AM L++ L   
Sbjct: 1   MNLHTLLLNKFRAALVAIGAPENSPAP------LSRATKVGFGDYQFNGAMALAKVLKQK 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ IVA +++D   + + +AG GFIN+YLS  +L   LS               + 
Sbjct: 55  PRDIADKIVAAVELDGIAEKLEVAGPGFINIYLSKDWLATQLSEAAADPRLN--IETQRS 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G++V R+ ++ D G Q   L   
Sbjct: 113 KTVVVDYSSPNLAKEMHVGHLRTTIIGDAVVKALEFMGHKVIRQNHMGDWGTQFGMLLAH 172

Query: 181 VFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  + +  Q      SDL E +Y    ++            E   F +     +VK    
Sbjct: 173 LNDKLESNQVAETALSDL-EDFYREAKVRF----------DEEDGFADRAREYVVKLQGG 221

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A    +  +   ++I H    SE+ + + + S  R  I   +   +    ++   ++K 
Sbjct: 222 DAHCLALWQNFIDVSITH----SEEVYDKLNVSLTRADIMGESAYNHDLANVVSELQAKG 277

Query: 299 TQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
               + +  Q++F    +   G      + KS G Y Y   DLA  + +  +   D  + 
Sbjct: 278 LA-VESEGAQVVFLPELADKEGKPAAYIVQKSGGGYLYATTDLAAVRYRNKQLHADRTLI 336

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHV 413
           +  +  + + K+ E VA      + +     C   + L  DG P K   R G  + L  +
Sbjct: 337 LTDARQALHFKQTEIVARKAGFIEPEQTYEHCPFGMMLGSDGRPFK--TRTGGTVKLVEL 394

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           +G  +V++  L +  +    F +  +    
Sbjct: 395 LDEAVERAQALLSKRETDLSTDELKVLANKIGIGAVKYADLSKNRTTDYMFSWDSMLSF- 453

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAY R  SIFR+A      L+  +         +     E  L V   +Y 
Sbjct: 454 EGNTAPYLQYAYTRVMSIFRKAGVDHKTLNAAI---------TLDAPQEKMLAVKQLQYV 504

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I        P+ L  YLY+LAS+F   +      P L+   A   ++   R+ L    
Sbjct: 505 EAINQVIAEGTPHVLCTYLYELASLFMSFYEAC---PMLKEGIA--PEVRDSRMTLAALT 559

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  + SGL+++G+++   M
Sbjct: 560 AKTLQSGLSLLGIDTMERM 578


>gi|28210674|ref|NP_781618.1| arginyl-tRNA synthetase [Clostridium tetani E88]
 gi|38372518|sp|Q896N5|SYR_CLOTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28203112|gb|AAO35555.1| arginyl-tRNA synthetase [Clostridium tetani E88]
          Length = 563

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 122/611 (19%), Positives = 240/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++   +   L  I   I++  + +++ +IE P     G  +      L++     P  IA
Sbjct: 2   NYKELISERLSSI---IELPIEDIEK-LIEIPPKPEMGDFAF-PCFQLAKTFRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +     + + V   G  ++N ++  S + + ++  I+    +YG +  GKG K  
Sbjct: 57  EELKDKFDKS-NFEKVENLGP-YLNFFVDKSIFSKNVIEKILEEKDKYGASNEGKGRKAL 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           IE+ S N   P HVGH     +G+ L  +  F GY+  R  ++ D G Q   L  +   W
Sbjct: 115 IEYSSPNIAKPFHVGHLFSTAIGNALYKIFTFEGYDCERLNHLGDWGTQFGKLIAAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQA 240
             ++AL           Y   + +       ++      + L   EE+ + + K +  + 
Sbjct: 175 VDEEALEKEPIKELLRIYVKFHDEAEKDPALEEEGRLHFKRLEDGEEEEVKLWKKFR-EL 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K        LN++ D +  E  +       +  +++ +  +G + E       S   +
Sbjct: 234 SLKEFEKVYHMLNVEFDSYAGESFY----GDKMDAVVEEIDEKGLLVE-------SNGAK 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              ++   +              + KSDG+  Y   DLA    + +   F   IYV+G +
Sbjct: 283 VVMLEDYNM----------PPCIIKKSDGATIYATRDLATAIYRKKTYDFYKSIYVVGLE 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K++      +    A     +   +  + D    K+S R G+ I L  ++ E   
Sbjct: 333 QSLHFKQVFTTLKLMGHDWADDCTHIGFGLVRFTDR---KLSTRKGEVIFLEDLLKESVD 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 +G  +V F  L       + F + ++     E    YV
Sbjct: 390 KTLEIINEKNSELENKEETAKKIGIGAVIFTYLKNNRERDIVFSWDEMLSFDGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY+YAR +SI R++ +I  D+D+                 E +L+  L  + + I  A  
Sbjct: 449 QYSYARGKSILRKSGEIQGDVDYSKLNSK----------EEFELVKTLEGFNKSILQAIE 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  Y+ ++A  F+  ++H         + A + ++   R++LV +   +I + L
Sbjct: 499 KLEPSIVTRYVIEVAKAFNKFYNHN------SILNAEDEEIKKARIKLVESTCQVIKNAL 552

Query: 575 NIIGVESPNEM 585
           N++G+E   +M
Sbjct: 553 NLLGIEVVEKM 563


>gi|15674020|ref|NP_268195.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492641|ref|YP_003354621.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|23822205|sp|Q9CE12|SYR_LACLA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|12725087|gb|AAK06136.1|AE006433_6 arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281376305|gb|ADA65796.1| Arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 564

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 134/611 (21%), Positives = 248/611 (40%), Gaps = 79/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L      +   ++I    +IE+P+    G L+   A  L++ L   P  IA
Sbjct: 2   DEKQLVSQALSAAIDGVLGVEQIAA--IIEKPKSSDLGDLAFP-AFQLAKTLRKSPQIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      + V   G  ++N +L  +    +++  ++  G  YG   IG+G  V 
Sbjct: 59  GEIAEKIDTKG-FEKVIAVGP-YVNFFLDKNATASEVIREVLTEGEHYGDANIGQGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  + N   P  +GH R  V+GD++A +    GY+  +  ++ D G Q   L  +   +
Sbjct: 117 IDMSAPNIAKPFSIGHLRSTVIGDSIAKIYEKLGYQPIKINHLGDWGKQFGLLITAYKKY 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             +  +  N  D     Y  +  +       D+   +    +   +E+ L I K +S  +
Sbjct: 177 GDEATITANPIDELLKLYVKINAEAKEDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     L +  D F+ E  +       +  I+++L  +  ++E       SK   
Sbjct: 237 LIEFNRI-YGKLGVSFDHFMGESFY----SDKMDAIVEDLESKNLLHE-------SKGAL 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    + +   F   +YV+G +
Sbjct: 285 IVDLEKYNL----------NPALIKKTDGATLYITRDLATAAYRKKTFNFVKSLYVVGGE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K+L+AV        +  +++      + + G   K S R G  + L   +DE   
Sbjct: 335 QTNHFKQLKAVLKEAGYDWSD-DMVHVPFGMVTQGGK--KFSTRKGHVVKLEMALDEAVD 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V+F  L    +   DFD  ++     E    YV
Sbjct: 392 RAEKQIEAKNPNLENKEEVAKQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A      +D +     V       D    +++  L E+P V++ A  
Sbjct: 451 QYAHARIQSILRKA---NRKVDINNISLAV------SDAEAWEIVKALKEFPNVVKRAAD 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ +++H R       +  ++ +L   RL L+ A + ++   L
Sbjct: 502 NYEPSVIAKYAISLAQAFNKYYAHVR-------ILEDDAQL-DGRLALISATSIVLKEAL 553

Query: 575 NIIGVESPNEM 585
            ++GV +P  M
Sbjct: 554 RLLGVAAPENM 564


>gi|326796968|ref|YP_004314788.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547732|gb|ADZ92952.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score =  398 bits (1024), Expect = e-108,   Method: Composition-based stats.
 Identities = 121/616 (19%), Positives = 232/616 (37%), Gaps = 70/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   ++         ++     ++ +      G    N  M +++ L  +
Sbjct: 1   MNI----QTLLNQRIQAAMIAAGAPEESPA--LVRQSAKVQFGDYQANGIMGVAKKLKTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AE ++ ++ +    D V IAG GFIN++L  ++L +     +          + + 
Sbjct: 55  PRAFAEQVLEKLDLTDLADKVEIAGPGFINVFLKNAWLAQE-QKSLRKSERLDVVTVSEP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ + N    MHVGH R  V+GD +   + F G++V R+ ++ D G Q   L   
Sbjct: 114 QTVVVDYSAPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHKVVRQNHVGDWGTQFGML--- 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y + L    S++       +         A K   +   F       +VK  S   
Sbjct: 171 --LAYMERLRAESSEIS----MALSDLETFYREAKKCFDDDEAFSVRARELVVKLQSGDE 224

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             K +  D   ++++H     E+ +     S  R  +   +      + ++    +K   
Sbjct: 225 ECKALWQDFINISLEHC----EETYQMLGVSLERKNVMPESAYNDDLQNVINDLDAKGLI 280

Query: 301 KCDMDRKQLLFR--STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG 357
           K D   K +     +   G+     + K+ G + Y   DLA  + +      D  +Y + 
Sbjct: 281 KEDQGAKCVFLEEFANKDGEITPIIVQKTGGGFLYSTTDLAAVRYRQNVLKADRALYFVD 340

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE 416
           +  S + +++  ++         I++       +   DG P K   R+G    L  +++E
Sbjct: 341 ARQSLHFEQIFTLSRKAGFADDSISLEHMPFGTVMGSDGKPFK--TRSGGVAKLSALLEE 398

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  SV++  L +  +    F++  +    + N
Sbjct: 399 AQERAYKLVASKNPDMAEDELRNIGRVVGVASVKYADLSKNRTSDYVFNWDTMLSF-EGN 457

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYAY+R  SI R A     D+D      ++    S  +  E  L V L ++   I
Sbjct: 458 TAPYLQYAYSRVASIVRNA-----DIDAAALQGDI----SVIEDQERALAVKLVQFEEAI 508

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +       P+ L  YLY+LA  F   +           +   + ++   RLQL    AS 
Sbjct: 509 QQVGNDGMPHFLCAYLYELAGTFMSFYEAC-------PILKADEEVKNSRLQLALNTAST 561

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+E+   M
Sbjct: 562 LKLGLSLLGIETLERM 577


>gi|307244036|ref|ZP_07526155.1| arginine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492560|gb|EFM64594.1| arginine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 577

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 133/616 (21%), Positives = 243/616 (39%), Gaps = 82/616 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLD 60
           L ADF   +   +K      ++E   L+ I  +IE P +   G  +      L++     
Sbjct: 11  LMADFKKLISEIIKS-----EIEDLTLEEITALIEVPPNKEMGDYAF-PCFKLAKIFRKA 64

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGK 119
           P  IAE +  +I+   D++ +   G G++N +++   L K  ++ ++     YG++  GK
Sbjct: 65  PNAIAEDLAGKIQPTDDINKIVNLG-GYVNFFVNKESLAKKVINQVLSEKENYGKSEFGK 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +EF S N   P H+GH R  V+G+ L+ +    GY V +  ++ D G Q   L +
Sbjct: 124 GKTVVVEFSSPNIAKPFHIGHVRTTVIGNALSKIYQSQGYHVEKLNHLGDYGTQFGKLIV 183

Query: 180 SV-FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKD 235
           +   W  +QA+  +   +L + Y           E+ D+           +++   + + 
Sbjct: 184 AYKLWGDKQAVEKDPIKELLKLYIRFHDEAEAKPEMEDEAREWFTKLENGDQEAKDLWQW 243

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++ +  R     L+I  D ++ E  +       +  +I+ L  +  + E       
Sbjct: 244 FRDESLKEFSRV-YDLLDIDFDSYVGESFY----SDKMPAVIEELKEKNLLVE------- 291

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYERGFDNMIY 354
           S      D++  +L              + K DGS  Y   DLA  F  K    FD  IY
Sbjct: 292 SDGAMIVDLEDSKL----------PPALIQKRDGSTLYLTRDLASAFYRKKIYNFDKSIY 341

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G+    + K+   +   +     +  V +   +    +G    MS R G  + L  V+
Sbjct: 342 VVGAQQELHFKQCFEIIKRMGYDWYKDMVHVQFGMVALEEGT---MSTRKGRVVFLEDVL 398

Query: 415 DE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           ++                         VG  +V F  L     +   F + +      E 
Sbjct: 399 NQAIDRTRQIIEEKNPDAENIYEVAKAVGVGAVVFQELSNSRIKDYTFSWDRTLSFEGE- 457

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQY +ARC ++ R+A         D      I  E+  D     ++  L  + + I
Sbjct: 458 TGPYVQYTHARCCAVLRKA---------DQPISADINYEALSDQDAADVLSVLETFNKSI 508

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A    EP+ +  ++ DLA  F+  + +         +   +  L   RL LV A    
Sbjct: 509 MTAMKKNEPHIVTRFVLDLAQAFNKFYHNS-------PILVEDDDLRAARLALVEATRQT 561

Query: 570 INSGLNIIGVESPNEM 585
           I + L I+G+++P +M
Sbjct: 562 IENALKILGMKAPQKM 577


>gi|319946042|ref|ZP_08020291.1| arginine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747850|gb|EFW00095.1| arginine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 562

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 129/616 (20%), Positives = 245/616 (39%), Gaps = 85/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L   ++ +D +  +        ++E+P+    G ++   A  L++     
Sbjct: 1   MNHKELIASELAKVIEGLDQETILN-------LLEQPKSSDLGDIAFP-AFSLAKIERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  +++ +++ +G +YG+   G 
Sbjct: 53  PQAIAADIAEKIDAS-HFEKVVATGP-YVNFFLDKSQISDQVIKAVIQAGADYGQQDEGH 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L +
Sbjct: 111 GGNITIDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKMGYNTIKINHLGDWGKQFGLLMV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKD 235
           +   W  ++A+  N  D     Y  +  +       D+         E+   +   + + 
Sbjct: 171 AYKKWGSKEAVEANPIDELLKLYVRINAEIENDPALDEEGRLWFKKLEDGDPEATELWQW 230

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +++++  R   K L ++ D    E  ++      + + +  L  +G + E       
Sbjct: 231 FRDESLVEFNRI-YKLLGVEFDSLNGEAFYN----DKMDEAVQILEEKGLLKE------- 278

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
           SK     ++D   L              + KSDG+  Y   D+A    +     F   IY
Sbjct: 279 SKGASIVELDDVNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNIY 328

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------ 408
            +G + S + ++L+AV   +    +  +++  +   + ++    K+S R G+ I      
Sbjct: 329 AVGQEQSNHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTL 385

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  V   VG  +V+F  L        DFD   +     E 
Sbjct: 386 QEAISRAKAQIEEKNPELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE- 444

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV+
Sbjct: 445 TGPYVQYAYARIQSILRKAN----------FTPSADATYSLSDPESWEIIKLLQDFARVV 494

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A    +P  +A Y  +LA  F+ +++H R          +       RL L ++ A +
Sbjct: 495 KRAAENYDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVV 546

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++GVE+P +M
Sbjct: 547 LKEALRLLGVEAPEKM 562


>gi|87122857|ref|ZP_01078727.1| arginyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161868|gb|EAQ63163.1| arginyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 577

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 121/621 (19%), Positives = 239/621 (38%), Gaps = 80/621 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++R++         +          ++ +      G    N  M +++ L  +
Sbjct: 1   MNIQTLLNNRIQQA------MVAAGAADDAPALVRQSAKVQFGDYQANGMMGVAKKLKTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + +    D V IAG GFIN++L   ++   L + +          + K 
Sbjct: 55  PREFAQKVLDLLDLSDVADKVEIAGPGFINIFLKNDWMSGAL-ASLRKSARLDIAQVEKA 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  V+GD +   + F G+ V R+ ++ D G Q   L L+
Sbjct: 114 QTIVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHNVVRQNHVGDWGTQFGML-LA 172

Query: 181 VFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKD 235
              R +Q         SDL   Y          +  A +    +++    +E+ L + ++
Sbjct: 173 YMERLRQENTEISMALSDLETFYRAAKTCFDDDEAFAARARELVVSLQSGDEECLALWQE 232

Query: 236 YSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + +   ++      K L +    +  + E  ++      + +++  L  Q  + E     
Sbjct: 233 F-INISLEHCEATYKTLGVSLTRENVMPESAYN----DDLHNVVAALKEQDLLQE----- 282

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
             S   Q   M+           G+     + K+ G + Y   DLA  + + +   FD  
Sbjct: 283 --SNGAQCVFMEEFA-----NKEGEITPVIVQKTGGGFLYATTDLAALRYRQDVLNFDRG 335

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLR 411
           +Y + +  S + +++  +       K + ++       +   DG P K   R+G    L 
Sbjct: 336 LYFVDARQSLHFQQIYTLGRKAGFVKPETSLEHMPFGTVMGTDGKPFK--TRSGTVAKLS 393

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            ++ E                           VG  SV++  L +  +    F++  +  
Sbjct: 394 DLLAEAQDRAYQLVAEKNPEMEEDELRNIGRVVGIASVKYADLSKNRTSDYVFNWDTMLS 453

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+ YAY+R  SI R+++    +L  D+         S  ++ E  L V L +
Sbjct: 454 F-EGNTAPYLLYAYSRVASIVRRSEIDVANLTGDI---------SLAESQERALAVKLMQ 503

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   ++       P+ L  YLY+LA  F   +           + A + +L   RLQL  
Sbjct: 504 FEEAVQQVANDGMPHNLCAYLYELAGTFMTFYEAC------PILNAED-ELKNSRLQLAL 556

Query: 565 AVASIINSGLNIIGVESPNEM 585
             AS +  GL+++G+E+   M
Sbjct: 557 NTASTLKQGLSLLGIETLERM 577


>gi|237741537|ref|ZP_04572018.1| arginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429185|gb|EEO39397.1| arginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 569

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 237/594 (39%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEIKNNFPCGDVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G  Y  + + +  KV I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+ +  +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGEAVCRIYKFLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                     +    D K  LF         
Sbjct: 257 GESFYNDMMGDVVKELVDK-----------KIAVDDDGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVTEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ ++        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNKNI--------EIKTDNKFEKSLATYLLVFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRTLLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|198426883|ref|XP_002129614.1| PREDICTED: similar to arginyl-tRNA synthetase [Ciona intestinalis]
          Length = 690

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 144/624 (23%), Positives = 248/624 (39%), Gaps = 75/624 (12%)

Query: 6   DFSSRLKNY-LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-----L 59
           + + RL    L  I       K  L  + I   ++   G    N+AM +S  L      +
Sbjct: 98  NINQRLTEIFLHSISASFPGLKGKLP-VSITLNQNEKFGDYQCNSAMPISGVLKAQGTKM 156

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAELI+  +     +DS  IAG GFIN+ L+ S+L++ LS ++V G+    +    
Sbjct: 157 APRQIAELILKNLPSSDLIDSCNIAGPGFINIRLNVSFLKRALSDVLVHGVRTHHSKGEC 216

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G    I++ S N    MHVGH R  ++GD +A+L  + G+EV R  ++ D G Q   L  
Sbjct: 217 GKV-VIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYFGHEVLRVNHVGDWGTQFGMLIA 275

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-- 237
            +   +      +    P G     Y +      + K   +   F +  +  +VK  S  
Sbjct: 276 HLTDMFPNYKEESP---PIGDLQAFYKQ------SKKRFDDDPEFKKRAYSCVVKLQSGD 326

Query: 238 ---VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291
              + A   I     K   + +D     +   RG+    + +  +I  + +QGYV     
Sbjct: 327 PDFINAWKLICDVSRKEFQVIYDRLGIVNLIERGESFYHNLMPPVIAEIEKQGYV----- 381

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFD 350
                        D ++L+F     G      ++KSDG +TY  +DLA  K + ++    
Sbjct: 382 ----------VVEDGRKLVFPE---GSQFPLTIVKSDGGFTYDTSDLACIKQRIFDESGA 428

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           N+IYV  +  + + K + +VA  +     Q+  +      +       K   R+G+ + L
Sbjct: 429 NLIYVTDAGQAAHFKAIYSVARKMGWYDPQVTRVEHVAFGVVLGEDRKKFKTRSGETVRL 488

Query: 411 RHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             ++DE                             V    +++  L         F F K
Sbjct: 489 AALLDEGRKRCEEKLKEKGRDKELTPEEFKAAQEAVAYGCIKYADLSHNRINDYVFSFDK 548

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           + E  + N   Y+ YAY R +SI R AK    +L                   EL+L   
Sbjct: 549 MLE-DRGNTAAYLLYAYTRIKSIARVAKVSREELKEAASSFYDDDGLPLEHAKELKLARF 607

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P V++       P+ L  YLY+LA+V+   +       + R    +  K+   RL 
Sbjct: 608 ITRFPEVLQRVCDDLAPHTLCDYLYELATVYTEFYDVCYCVEKDR-KTGDVVKIHKHRLL 666

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A  ++++    I+G++  ++M
Sbjct: 667 LCDATVAVMDQCFKILGIKPVHKM 690


>gi|116492437|ref|YP_804172.1| arginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266099|sp|Q03GE2|SYR_PEDPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116102587|gb|ABJ67730.1| arginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 562

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 133/610 (21%), Positives = 259/610 (42%), Gaps = 79/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  ++   L     +   + +I ++  IE P++   G  +      L++ L   P  IA
Sbjct: 2   DYKKKVAAALAPALNEYLTDTEIYEK--IEIPKESKMGDYAFP-TFTLAKVLRKAPQMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I  D   + V +AG  +IN +L   ++  ++L +++    EYG+N  G    V 
Sbjct: 59  SELVEKIDQD-QFEKVEVAGP-YINFFLDKTAFGAEVLGTVLSQKAEYGQNDDGNQGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G++L+ +M+ +GY   +  ++ D G Q   L  +   W
Sbjct: 117 IDMSSPNIAKPISMGHLRSTVIGNSLSLIMSKNGYNPIKINHLGDWGTQFGKLITAYKLW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFPE-EKWLPIVKDYSVQAM 241
             ++ +  +  +    YY   + +     EL D          + ++    +  +  +  
Sbjct: 177 GSEEEVKADPINKLLEYYVRFHKEDQEKPELDDIARDWFKKLEDGDEEAMNLWQWFREES 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +     L I  D +  E  ++      + +I+  L  +G + E       S+  Q 
Sbjct: 237 LKSFKQIYDKLGITFDSYKGEAFYN----DKMDEIVQILEDKGLLKE-------SQGAQV 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+++  L              + K+DG+  Y   DLA    +Y    F+  +YV+G++ 
Sbjct: 286 VDLEKYNL----------NPALIKKTDGATLYITRDLAAALYRYRTYDFNQSLYVVGAEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415
           + + K+L+AV   +    +  +V       +  +G   K+S R+G  + L  V++     
Sbjct: 336 TNHFKQLKAVLKEMGFDWSD-DVHHIPFGLITLNGK--KLSTRSGRVVLLDEVLNDAVSL 392

Query: 416 --------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                               EVG  +V F  L  + +   DF+   V     E    YVQ
Sbjct: 393 AKKQINDKNPDLANADTVAKEVGVGAVIFHDLKNERTNSFDFNLEDVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y+ AR  SI R+A D+      ++            D      +  L ++P +++ A   
Sbjct: 452 YSRARAESILRKAGDVEEFAQLNI-----------TDPKAWDTLKALQDFPNIVKRAAAQ 500

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y   LA  F+ ++++ +       + A++ + T  RL LV +V+ ++   L 
Sbjct: 501 YEPSVIAKYALGLAKAFNKYYANSK-------ILADDEEKT-ARLALVKSVSIVLEESLR 552

Query: 576 IIGVESPNEM 585
           ++GV++P+EM
Sbjct: 553 LLGVKAPDEM 562


>gi|254304104|ref|ZP_04971462.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324296|gb|EDK89546.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 569

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 129/593 (21%), Positives = 242/593 (40%), Gaps = 76/593 (12%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         ++ + IA
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEIKNNFPYGDVIEKLEIA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G  Y  + + +  KV ++F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GESYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYP- 202
           ++G+++  +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGESICRIYKFLGYDVVADNHIGDWGTQFGKLIVGYRNWLNKEAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L+I  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDIHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                  +  +    D K  LF         
Sbjct: 257 GESFYNDMMADVVKELVDK-----------KIAIDDEGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K++  +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQVFKITDMLGWDIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIVFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVTEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            +L+ D+     I  E++F   E  L  +L  +P  +  A    +P  +A YLY+L+   
Sbjct: 471 IELNEDIE----IKTENKF---EKSLATYLLAFPISVLKAAETFKPNLIADYLYELSKKL 523

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 524 NSFYNNC-------PILNQDIETLKSRSLLIKKTGEVLKEGLELLGIPVLNKM 569


>gi|322390459|ref|ZP_08063979.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142858|gb|EFX38316.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 562

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 132/619 (21%), Positives = 241/619 (38%), Gaps = 91/619 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L   +  +D    +        ++E+P+    G ++   A  L++     
Sbjct: 1   MNNKELIASELAKVIDSLDQDAILN-------LLEQPKSSDLGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  +++ S++ +G +YG+   G 
Sbjct: 53  PQAIAADIAEKIDQSA-FEKVVATGP-YVNFFLDKSKISDQVIKSVIEAGADYGQQDEGN 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L +
Sbjct: 111 GQNITIDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKMGYNTIKINHLGDWGKQFGLLMV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +   W  ++A+  N  D     Y  +         A+  +   L+    KW   ++D   
Sbjct: 171 AYKKWGSKEAVEANPIDELLKLYVRI--------NAEIENDPELDEEGRKWFKKLEDGDP 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
            + +       + L   N  + +   E D   G+      + + +  L  +G + E    
Sbjct: 223 EATELWQWFRDESLVEFNRIYKLLGVEFDSLNGEAFYNDKMDEAVQILEDKGLLKE---- 278

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
              SK     ++D   L              + KSDG+  Y   D+A    +     F  
Sbjct: 279 ---SKGASIVELDDVNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVK 325

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IY +G + S + ++L+AV   +    +  +++  +   + ++    K+S R G+ I   
Sbjct: 326 NIYAVGQEQSNHFRQLKAVLKKMGFDWSD-DMVHVDFGLVTKN--RQKLSTRKGNIILLE 382

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     V   VG  +V+F  L        DFD   +    
Sbjct: 383 PTLQEAISRAKAQIEEKNPELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFE 442

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    YVQYAYAR +SI R+A           F  +     S  D    ++I  L ++ 
Sbjct: 443 GE-TGPYVQYAYARIQSILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFS 491

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           RV++ A    +P  +A Y  +LA  F+ +++H R          +       RL L ++ 
Sbjct: 492 RVVKRAAENYDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERESRLALSYST 543

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GV++P +M
Sbjct: 544 AVVLKEALRLLGVDAPEKM 562


>gi|116072008|ref|ZP_01469276.1| arginyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065631|gb|EAU71389.1| arginyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 590

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 139/629 (22%), Positives = 234/629 (37%), Gaps = 92/629 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L   L+    +   + +      +        G    N A+ L++PL   P  IA 
Sbjct: 4   LSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPEFGDFQANGALPLAKPLKQPPRQIAT 63

Query: 67  LIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV ++  D        +  IAG GFINL + P  L + L++ + +    G   +     
Sbjct: 64  AIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARLGTD-RLGVPAVDNAAP 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 123 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHVGDWGTQFGMLITHLK 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               + L   D+              +G +L   Y      F ++          V  + 
Sbjct: 183 QVAPETLDTADA------------VDLG-DLVAFYREAKKRFDDDDAFQATSRDEVVKLQ 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQK 301
                 LKA  +  D         R +   + D +D  L+ +G  +     P   +  + 
Sbjct: 230 GGDPVSLKAWGLLCDQ-------SRREFQKLYDRLDIRLSERGESFYNPYLPAVLEGLKA 282

Query: 302 CDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-----ERGF 349
            D+    D  Q +F   + G D   +   + K DG + Y   DLA  + ++         
Sbjct: 283 VDLLVTDDDAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRYRFASSPAGDAA 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +IYV  +  + +   +  VA         A++  +   LV+   DG   K+  RAGD 
Sbjct: 343 QRVIYVTDAGQANHFAGVFQVAERAGWIPAEARLEHVPFGLVQ-GEDGK--KLKTRAGDT 399

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 400 VRLRDLLDEAVERSEQDLRSRLQEEERTESDAFISHVATTVGLAAVKYADLSQNRLTNYQ 459

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+  D+           N   Q SE    E 
Sbjct: 460 FSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLGVS--------NAALQFSE--PQEW 508

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++ RVI        P +L  YL++L+ VF+  +       ++  ++A    L 
Sbjct: 509 ALVRELLKFDRVIVEVEDELLPNRLCSYLFELSQVFNRFYD------QVPVLKAEPSAL- 561

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L    A  +  GL ++G+ +   M
Sbjct: 562 ASRLALCRHTADTLRCGLALLGIPTLERM 590


>gi|71904479|ref|YP_281282.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|94991409|ref|YP_599509.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|109895043|sp|Q48QT3|SYR_STRPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123257889|sp|Q1JEG8|SYR_STRPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71803574|gb|AAX72927.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|94544917|gb|ABF34965.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 563

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 126/613 (20%), Positives = 247/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKTKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + +++D L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHSVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|50915173|ref|YP_061145.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|68052902|sp|Q5X9F1|SYR_STRP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50904247|gb|AAT87962.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 563

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 127/614 (20%), Positives = 249/614 (40%), Gaps = 86/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             + A+       P      +Y++      A+  +   ++    +W   ++D    + + 
Sbjct: 176 GDETAVQ----AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +D      D + G+      + +++D L  +  + E         
Sbjct: 228 WQWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES-------- 279

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
                   +   +      G +    + KSDG+  Y   DLA    +     F   +YV+
Sbjct: 280 --------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVV 331

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I        
Sbjct: 332 GNEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAE 388

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +++F  L        DFD   +     E   
Sbjct: 389 AINRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TG 447

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+ 
Sbjct: 448 PYVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKR 497

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
            +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++ 
Sbjct: 498 TSDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLK 549

Query: 572 SGLNIIGVESPNEM 585
             L ++GV++PNEM
Sbjct: 550 EALRLLGVDAPNEM 563


>gi|94995321|ref|YP_603419.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123257496|sp|Q1J486|SYR_STRPF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94548829|gb|ABF38875.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 563

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 125/613 (20%), Positives = 247/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + ++++ L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLELLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLQEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLETMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|256844871|ref|ZP_05550329.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718430|gb|EEU31985.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 569

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 237/594 (39%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEIKNNFPCGDVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G  Y  + + +  KV I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+ +  +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGEAVCRIYKFLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                     +    D K  LF         
Sbjct: 257 GESFYNDMMADVVKELVDK-----------KLAVDDDGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVTEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ ++        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNKNI--------EIKTDNKFEKSLATYLLVFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRALLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|47208421|emb|CAF89939.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 696

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 138/656 (21%), Positives = 249/656 (37%), Gaps = 110/656 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + + RL+     +  +    +     + +   +    G    N+AM ++     + + ++
Sbjct: 75  NINQRLQEVFG-LAIRTSFPELENPPLALAPNQQPKFGDYQCNSAMAMAQMLKAKGVKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +    IAG GFIN++L  S++ K+LS ++++G++       K 
Sbjct: 134 PREIAERITRNLPDNELIQKTEIAGPGFINIHLKRSFVSKLLSKLLINGVKPPPLASRK- 192

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V ++F S N    MHVGH R  ++GD+++ L  F G++V R  ++ D G Q   L   
Sbjct: 193 -RVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  ++   L  +    P G            +L   Y      F E++         V  
Sbjct: 252 LQDKFPDYLTASP---PIG------------DLQAFYKESKKRFDEDEAFKKRAYQCVVK 296

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTT 299
           +     D +KA N+  D+        R +   I D +D  +  +G  Y   L     K  
Sbjct: 297 LQSKEPDFIKAWNLICDV-------SRQEFQKIYDCLDIKIIERGESYYQDLMTDVVKEA 349

Query: 300 QK---CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
           +      +D  + +  +   G  +   ++KSDG YTY  +DLA  + + +E   D +IYV
Sbjct: 350 EDRGFVQLDEGRKIIFAP--GQSLPLTVVKSDGGYTYDTSDLAALRQRLFEEKADTIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSE--------KKAQINVLLCELVRLYR-------------- 393
             S    + + + A A  +          + A   V+L E  RL R              
Sbjct: 408 TDSGQGSHFQVVFAAAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQRSRNRIRHRYPAPTS 467

Query: 394 --------------DGMPIKMSKRAGDFITLRHVVDE----------------------- 416
                         +    K   R+G+ + L  ++DE                       
Sbjct: 468 VLGLRAADVSSALPNLPRKKFKTRSGETVRLMDLLDEGLKRSMDKLKEKERDQVLTADEL 527

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R A  
Sbjct: 528 VKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-- 584

Query: 471 IFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
              ++D     +     E   +   E +L   +  +P ++         + L  YLY+LA
Sbjct: 585 ---NIDEATLRKEAASTEILLEHEKEWKLGKCILRFPEILVKILDDLLLHSLCDYLYELA 641

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + F   +       + R       K+ M R+ L  A A+I+    +I+G+     M
Sbjct: 642 TTFTEFYDSCYCVEKDRQ-TGEVVKVNMWRMLLCDATAAIMAQCFHILGLNPVERM 696


>gi|237745037|ref|ZP_04575518.1| arginyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432266|gb|EEO42478.1| arginyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 569

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 129/594 (21%), Positives = 242/594 (40%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITIATNENFGDYQCNFAMINSKIIGDNPRKIAEKIKNNFPYGNVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G +Y  + + +  KV ++F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISDSIKKI---GEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+++  +  + GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGESVCRIYRYLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      + D++  L  +G   +        +  +    D K  LF         
Sbjct: 257 GESFYN----DMMADVVKELIDKGLAVD-------DEGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDILGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVAEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ D+        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNEDI--------EIKTDNKFEKSLATYLLAFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRALLIKKTGKVLKDGLRLLGIPVLNKM 569


>gi|15675893|ref|NP_270067.1| arginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|94989449|ref|YP_597550.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|139474582|ref|YP_001129298.1| arginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|161936118|ref|YP_283171.2| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|23822204|sp|Q99XL5|SYR_STRP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123258095|sp|Q1JJG7|SYR_STRPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232847|sp|A2RGX5|SYR_STRPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13623129|gb|AAK34788.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|94542957|gb|ABF33006.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|134272829|emb|CAM31107.1| arginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|323128228|gb|ADX25525.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 563

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 126/613 (20%), Positives = 247/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + +++D L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|312866812|ref|ZP_07727025.1| arginine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097595|gb|EFQ55826.1| arginine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 562

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 133/619 (21%), Positives = 242/619 (39%), Gaps = 91/619 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L   +  +D    +        ++E+P+    G ++   A  L++     
Sbjct: 1   MNNKELIASELAKVIDSLDQDAILN-------LLEQPKSSDLGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  +++ S++ +G +YG+   GK
Sbjct: 53  PQAIAADIAEKIDQSA-FEKVVATGP-YVNFFLDKSKISDQVIKSVIEAGADYGQQDEGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L +
Sbjct: 111 GQNITIDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKMGYNTIKINHLGDWGKQFGLLMV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +   W  ++A+  N  D     Y  +         A+  +   L+    KW   ++D   
Sbjct: 171 AYKKWGSKEAVEANPIDELLKLYVRI--------NAEIENDPELDEEGRKWFKKLEDGDP 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
            + +       + L   N  + +   E D   G+      + + +  L  +G + E    
Sbjct: 223 EATELWQWFRDESLVEFNRIYKLLGVEFDSLNGEAFYNDKMDEGVQILEDKGLLKE---- 278

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
              SK     ++D   L              + KSDG+  Y   D+A    +     F  
Sbjct: 279 ---SKGASIVELDDVNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVK 325

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IY +G + S + ++L+AV   +    +  +++  +   + ++    K+S R G+ I   
Sbjct: 326 NIYAVGQEQSNHFRQLKAVLKKMGFDWSD-DMVHVDFGLVTKN--RQKLSTRKGNIILLE 382

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     V   VG  +V+F  L        DFD   +    
Sbjct: 383 PTLQEAISRAKAQIEEKNPDLENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFE 442

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    YVQYAYAR +SI R+A           F  +     S  D    ++I  L ++ 
Sbjct: 443 GE-TGPYVQYAYARIQSILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFS 491

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           RV++ A    +P  +A Y  +LA  F+ +++H R          +       RL L ++ 
Sbjct: 492 RVVKRAAENYDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERESRLALSYST 543

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GV++P +M
Sbjct: 544 AVVLKEALRLLGVDAPEKM 562


>gi|269122231|ref|YP_003310408.1| arginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616109|gb|ACZ10477.1| arginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 571

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 125/611 (20%), Positives = 241/611 (39%), Gaps = 75/611 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + +L+  + E    I     I   I I+       G  +TN AM+ S+ LG +P  IA+
Sbjct: 4   INKQLEKLIYENVKNIF---NIDSDIEIQSSNKKGFGDFATNFAMVNSKTLGKNPREIAQ 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
             +     +  ++ + IAG GFIN++L   ++      I     ++  + +  G K  I+
Sbjct: 61  TFIDNFSENDIIEKLEIAGPGFINIFLKSKFINSEFKKIGKEDYDF--SFLDNGKKTIID 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           + S N    MH+GH R  ++GD++  +M F+G+E+  + +I D G Q   L +    W  
Sbjct: 119 YSSPNIAKRMHIGHLRSTIIGDSIKRIMKFTGFEILADNHIGDWGTQFGKLIVGYDRWLD 178

Query: 186 QQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           Q+    +  +  E  Y             E   +     L   +E+   +  ++ +   +
Sbjct: 179 QKNYEEDPIEELERIYVKFSEESKNDPELESIAREELRKLQSGDERNNRLWHEF-IDISL 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K      K LNI  D++  E  ++   P  +  ++                         
Sbjct: 238 KEYDKIYKRLNITFDLYNGESFYNDMMPDILDILVSR-------------------KIAV 278

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
           +     ++F            + K DGS+ Y  +DLA  K + E    D  IY+      
Sbjct: 279 EDQDALVVFFDEDTKLH-PCIVQKKDGSFLYSTSDLATIKYRREVLHIDKAIYITDERQQ 337

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + +++  +A  + +      V +   +  ++DG+    S R G+ I L  ++DE     
Sbjct: 338 DHFRQVFKIAEILGDGFDYEKVHVWFGIMRFKDGI---FSTRLGNIIKLNDLLDEAKKEV 394

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  ++++  L +  +  + F++ KV    + N   Y+
Sbjct: 395 RKTIEIKNPGIPDDEKEKISEIVGIGAIKYFDLSQNRTSPVIFEWEKVLSF-EGNTGPYL 453

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR  S+FR+        + +    + I  ES+    E  L + L  +P ++  A  
Sbjct: 454 QYTYARIMSVFRKLNGENIGYNEE----SEIILESDI---ERDLSLMLLNFPNIVVKAGE 506

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P  +A YL++ A  F   ++              +  L   R+ L    A ++ +GL
Sbjct: 507 TYRPNLIADYLFETAKTFSTFYNQKH------IANETDLALRNSRITLASKTAHVLKAGL 560

Query: 575 NIIGVESPNEM 585
           +++G+++ + M
Sbjct: 561 DLLGIKTVDRM 571


>gi|116512983|ref|YP_811890.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025141|sp|Q02W95|SYR_LACLS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116108637|gb|ABJ73777.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 564

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 246/611 (40%), Gaps = 79/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L      +   ++I    +IE+P+    G L+   A  L++ L   P  IA
Sbjct: 2   DEKQLVSQALSAAIDGVLGVEQIAA--IIEKPKSSDLGDLAFP-AFQLAKTLRKSPQIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      + V   G  ++N +L  +    +++  ++  G  YG   IG+G  V 
Sbjct: 59  GEIAEKIDTKG-FEKVIAVGP-YVNFFLDKNATASEVIREVLTEGEHYGDANIGEGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  + N   P  +GH R  V+GD++A +    GY+  +  ++ D G Q   L  +   +
Sbjct: 117 IDMSAPNIAKPFSIGHLRSTVIGDSIAKIYEKLGYQPIKINHLGDWGKQFGLLITAYKKY 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             +  +  N  D     Y  +  +       D+   +    +   +E+ L I K +S  +
Sbjct: 177 GDEATITANPIDELLKLYVKINAEAKEDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     L +  D F+ E  +       +  I+++L  +  ++E       SK   
Sbjct: 237 LIEFNRI-YGKLGVTFDHFMGESFY----SDKMDAIVEDLENKNLLHE-------SKGAL 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    + +   F   +YV+G +
Sbjct: 285 IVDLEKYNL----------NPALIKKTDGATLYITRDLATAAYRKKTFNFVKSLYVVGGE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K+L+AV        +  +++      + + G   K S R G  + L   +DE   
Sbjct: 335 QTNHFKQLKAVLKEAGYDWSD-DMVHVPFGMVTQGGK--KFSTRKGHVVKLEMALDEAVD 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V+F  L    +   DFD  ++     E    YV
Sbjct: 392 RAEKQIEAKNPNLENKEEVAKQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A       +  L            D    +++  L E+P +++ A  
Sbjct: 451 QYAHARIQSILRKANRKVNIDNISLVVS---------DAEAWEIVKALKEFPNIVKRAAD 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ +++H R       +  ++ +L   RL L+ A + ++   L
Sbjct: 502 NYEPSIIAKYAISLAQAFNKYYAHVR-------ILEDDAQL-DGRLALISATSIVLKEAL 553

Query: 575 NIIGVESPNEM 585
            ++GV +P  M
Sbjct: 554 RLLGVAAPENM 564


>gi|21911345|ref|NP_665613.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896719|ref|NP_803069.1| arginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25453284|sp|Q8K5J2|SYR_STRP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21905560|gb|AAM80416.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811973|dbj|BAC64902.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 563

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 125/613 (20%), Positives = 247/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + ++++ L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLELLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|257463219|ref|ZP_05627618.1| arginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060806|ref|ZP_07925291.1| arginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686482|gb|EFS23317.1| arginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 570

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 126/618 (20%), Positives = 248/618 (40%), Gaps = 81/618 (13%)

Query: 1   MYLF-ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L   + S  L + ++++        K +  + I    +   G    N AM+ S+ +G 
Sbjct: 1   MLLVNKELSKILTSTVEKLYA-----DKEMKEVEIAPATNEKFGDFQCNFAMMNSKIIGK 55

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IAE I   +  +  ++ + IAG GFIN++L  +YL   +    +    +  + + +
Sbjct: 56  NPRMIAEEIQKNLVENEVIEKLEIAGPGFINIFLKEAYLSTFIKK--IGKERFDFSFLNR 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+F S N    MH+GH R  ++GD++  +  + GY V  + +I D G Q   L +
Sbjct: 114 KGDVVIDFSSPNIAKRMHIGHLRSTIIGDSICRIYRYLGYHVIGDNHIGDWGTQFGKLII 173

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPG---VYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               W  Q A   N  +  E  Y        +H   E   +   + L   +E+   + K+
Sbjct: 174 GYRKWLDQDAYKKNAIEELERVYVKFSQESEEHPELEEEARLELKKLQDGDEENYNLWKE 233

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           + +Q  M+        L+I  D F  E  +H   P  ++++++    +           +
Sbjct: 234 F-IQVSMEEYEKLYSRLDIHFDTFYGESFYHPIMPEVVKELVERGIAK-----------E 281

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               +      ++ LF            + K DG++ Y  +D+A  K +      + +IY
Sbjct: 282 DDGAKVVFFPEEENLF---------PCIVQKKDGAFLYATSDIATVKFRLHTYDVNRLIY 332

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +       + K+   +   +     + +V     +  + DG+    S R G+ I L  ++
Sbjct: 333 LTDERQQDHFKQFFRITEMLGWNVEKYHVWFG--IMRFADGV---FSTRKGNVIRLEELL 387

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  ++++  L +     + F++ K+    +
Sbjct: 388 DEGKRRAYEIVQEKNPSLPEEEKQHIAEVVGVGAIKYADLSQNRQSPIIFEWDKILSF-E 446

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QY+YAR +SI  +AK++  +   D+            D  E  L  ++  +P 
Sbjct: 447 GNTAPYLQYSYARVQSILDKAKNLGKEATEDVV-------LVLQDKYERSLANYMTIFPS 499

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A    +P  +A YLYDL+   +  +++         +     ++   R  L     
Sbjct: 500 SVLKAAETCKPNLIADYLYDLSKKLNSFYNNC-------PILNQEEEILKSRAYLAKQAG 552

Query: 568 SIINSGLNIIGVESPNEM 585
            +I  GLN++G+++ + M
Sbjct: 553 EVIKQGLNLLGIQTLDRM 570


>gi|331007404|ref|ZP_08330588.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418782|gb|EGG93264.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 582

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 126/619 (20%), Positives = 254/619 (41%), Gaps = 71/619 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L +Y+ +      +  +   +  +   +    G    N AM  ++     
Sbjct: 1   MNI----RNLLSDYVTQAMLAAGLPAEC--QAHVAASKKAGFGDYQANGAMGAAKIAKAK 54

Query: 61  PLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           P  IA+ IV +++ + D    +  + IAG GFINL L P +L   +  I        ++ 
Sbjct: 55  PRDIAQQIVDQLQQNSDVQVMISHIEIAGPGFINLTLDPQWLAANIRIINQDKQLGIQDD 114

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +   V +++ S N    MHVGH R +++GD +   + F G+ V R+ ++ D G Q   
Sbjct: 115 --QPQTVVVDYSSPNLAKEMHVGHLRSSIIGDAVVRTLEFQGHNVVRQNHVGDWGTQFGM 172

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L   +    +Q      + L      G Y      + + K+  E   F  +    +VK  
Sbjct: 173 LIAELE---EQLQEGESASLALKDLEGFY------QSSKKHFDESEAFANKARDYVVKLQ 223

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           S  A +  + +  + +++ H    S++ + + + +   D +   +        ++   + 
Sbjct: 224 SGDAHVLTLWEQFRRVSLTH----SQEIYQQLNVTLNADDVRGESAYNDDLAPLVAELQQ 279

Query: 297 KTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352
           +     +    Q++F    +   G+     + K  G + Y   DLA  + + +    D +
Sbjct: 280 QGLA-VESQGAQVVFLEEMADKEGNPSPVIIQKQGGGFLYATTDLAALRYRSHTLHADRV 338

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSK--------- 402
           +Y + +  S +++++  +A         I++        +  DG P K            
Sbjct: 339 LYFIDARQSLHMQQVFTLAKKAGFVNDNISLEHHPFGTMMGADGKPFKTRTGGTVKLADL 398

Query: 403 ------RAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                 RA   +  ++          +  +VG  ++++  L +  +    F++  +    
Sbjct: 399 LVEAVERAEKVVADKNPNLSAEERAVIARKVGIGAIKYADLSKTRTNDYIFNWETMLSF- 457

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+QYAYAR +SIFR+A     D+D       +   E     +E+ L +   ++ 
Sbjct: 458 EGNTSPYLQYAYARIQSIFRKA-----DIDVSALNSELALNE----PAEVALSIKTLQFA 508

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+E +T    P+ L  YLYDLA +F   +      P L+     +      RLQL  +V
Sbjct: 509 EVVEQSTREAYPHLLCTYLYDLAGLFMRFYEQC---PILK--DGIDEDTKNSRLQLALSV 563

Query: 567 ASIINSGLNIIGVESPNEM 585
           A+ +N GL+++G+E+ ++M
Sbjct: 564 ANTLNKGLDLLGIETMDKM 582


>gi|294785848|ref|ZP_06751136.1| arginine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294487562|gb|EFG34924.1| arginine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 569

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 237/594 (39%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEIKNNFSCGDVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G  Y  + + +  KV I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+ +  +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGEAVCRIYKFLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYKKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                     +    D K  LF         
Sbjct: 257 GESFYNDMMADVVKELVDK-----------KLAVDDDGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVTEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ ++        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNKNI--------EIKTDNKFEKSLATYLLVFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRTLLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|15668412|ref|NP_247208.1| arginyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501049|sp|Q57689|SYR_METJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1590971|gb|AAB98223.1| arginyl-tRNA synthetase (argS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 566

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 149/609 (24%), Positives = 262/609 (43%), Gaps = 73/609 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S + N LKE+  K ++ K+I   I +++  +   G  S N    L++ L  +P  IA
Sbjct: 2   DIKSNIINALKEVISK-EICKEI--DIKLDKTPNLELGDYSVNICFRLAKELKKNPKIIA 58

Query: 66  ELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +V ++K         I A  G+IN Y+  +   K L   +            K  K+ 
Sbjct: 59  EELVDKLKAMNIEGVKEIKAVNGYINFYIDYNKFAKNLMEEIDKKGNNYGRGDKKSIKII 118

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E  SANP GP+H+GH R A++GD L  ++ F GY+V   YY+ND G Q+  +   +   
Sbjct: 119 LEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQMALVVYGIELF 178

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYS 237
                   D  + E Y                  EL  KY   L N  + +      +++
Sbjct: 179 GLDKEKKKDHAIAETYVKINKYLEEHPEEEEKILELMRKYEDALENNEDNEITKKF-EFA 237

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +  I++ LK LNI+HD F+ E  + R     ++ +I+ L   G V           
Sbjct: 238 VNYALDGIKETLKNLNIKHDTFVWESSYVRN--GMVKKVIEKLMETGKV----------- 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 +  +  +   +  G +    L +++G+  Y   D+AY   K  +  D  I V+G
Sbjct: 285 ------IKEETYMLDLSDFGIEKKMVLARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLG 337

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +DH    + ++A    +  K     V+  E + L        MS R G FI+   +++E 
Sbjct: 338 ADHKLTAEMVKAALKLLGSKVP--EVIFYEFISLPEG----SMSTRRGRFISTDELLEEA 391

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G  +VR+ +      + + F + +  +  K    F +QY
Sbjct: 392 IKRAKEECNKRGVEENIAYDIGLGAVRYNIARISPEKPMVFRWEEALDFEKVGCPF-IQY 450

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+ARC SI ++A++     D  +F         E  + E +LI  L E+  +I+ +  ++
Sbjct: 451 AHARCCSILKEAENKGVK-DEAVFNY-------ELTSEEKELIKMLDEFKDIIKESAESR 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             + LA YL +LA  F+  +++    P L     ++  +   RL+LV +  +++ +GL +
Sbjct: 503 RVHILANYLLELAKAFNRFYANC---PILMTKVDDD--VKKSRLKLVKSTKTVLETGLEL 557

Query: 577 IGVESPNEM 585
           +G+  P  M
Sbjct: 558 LGINCPGRM 566


>gi|257469475|ref|ZP_05633567.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063719|ref|ZP_07928204.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313689395|gb|EFS26230.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 570

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 116/618 (18%), Positives = 247/618 (39%), Gaps = 81/618 (13%)

Query: 1   MYLFA-DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +   + +   +N +K++       +K   ++ +    +   G   TN AM+ S+ +G 
Sbjct: 1   MLIIDREIAKIFENTIKKL-----YSEKETKKVEVSVATNEKFGDFQTNFAMMNSKIIGK 55

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  IA+ ++  ++ +  ++ + IAG GFIN++L   YL ++L        EY  + + +
Sbjct: 56  NPRVIAQEVLDNLEENNVIEKLEIAGPGFINIFLKSEYLGELLKKSRTE--EYDFSFLNR 113

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I++ S N    MH+GH R  ++GD++  +  + GY +  + +I D G Q   L +
Sbjct: 114 EGDVIIDYSSPNIAKRMHIGHLRSTIIGDSIRRIYKYLGYHIVADNHIGDWGTQFGKLII 173

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEEKWLPIVKD 235
               W  ++A   N  +  E  Y             E   +   + L   + +   + K+
Sbjct: 174 GYRRWLNKEAYKENPIEELERVYVEFSKLSETEPELEEEARLELKKLQDGDAENFALWKE 233

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           + ++  +       K L +  D +  E  +H      + ++++                +
Sbjct: 234 F-IKVSLDEYDKLYKRLGVHFDTYYGESFYHPIMQGVVEELVEK-----------KLAVE 281

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               +      +  LF            + K DG++ Y  +D+A  K + E    + +IY
Sbjct: 282 DDGAKVVFFPEEDNLF---------PCIVQKKDGAFLYSTSDIATIKFRRETYNINKLIY 332

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +       + K+   +   +     +    +   +  + DG+    S R G+ I L  ++
Sbjct: 333 LTDERQQDHFKQFFRITDMLGWNVEK--HHIWFGIMRFADGV---FSTRKGNVIRLEQLL 387

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           VG  ++++  L +     + F++ K+    +
Sbjct: 388 DEGKKRAYEIVQEKNPSLSEEEKDKIAEIVGVGAIKYADLSQNRQSPIIFEWDKIL-TFE 446

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QY+YAR +SI R+A+    ++D+         +    D  E  L  H+  +P 
Sbjct: 447 GNTAPYLQYSYARIQSILRKAESEGKNVDYS-------KEIKIEDKLERALADHITAFPM 499

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A+   +P  +A YL++L+  F+  ++          +   +  L   R  +     
Sbjct: 500 AVLKASETFKPNIIADYLFELSKKFNSFYNSC------PILNQEDEIL-YSRALIAKITG 552

Query: 568 SIINSGLNIIGVESPNEM 585
             I  GL+++G+++ + M
Sbjct: 553 ETIKDGLSLLGIKTLDRM 570


>gi|309813013|ref|ZP_07706741.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308433085|gb|EFP56989.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 594

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 140/620 (22%), Positives = 253/620 (40%), Gaps = 73/620 (11%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAH--GHLSTNAAMILSRPLGLDPLTIAE 66
           S L  +L        +  +  D   + RP +       +  NAAM L++ +G +P  +A 
Sbjct: 5   SALTGHLSNAIAS-ALGDEWRDADPVIRPANKKQTSADVQVNAAMALAKKVGKNPREVAS 63

Query: 67  LIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV  ++ D +V    D V IAG GF+N+ LS  ++    S+I+  G   G     K   
Sbjct: 64  AIVEALRADDEVMALVDDVEIAGPGFLNITLSTDWVAAQASTILADG-SLGVAPAAKTEI 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I++ S N    MHVGH R  VVGD+LA ++   G+ V R+ ++ D G     L   + 
Sbjct: 123 IPIDYSSPNVAKEMHVGHLRTTVVGDSLARVLERLGHTVIRQNHVGDWGTPFGMLIEHLL 182

Query: 183 WRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSE-LLNFPEEKWLPIVKD---YS 237
              + +      +  P  +Y     K    E A+   S+   N    K + +++     +
Sbjct: 183 EVGEDSPEAALLESDPNAFYQAARTKFDTAEKAEPAGSKGDFNTRARKRVTLLQGGDPET 242

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +    K++       N  + +            +     +   +       GI    +S+
Sbjct: 243 LAHWNKLMERSKAYFNKVYGLL---------GVTLTDADLAGESTYNDELAGICDDLESR 293

Query: 298 TTQKCDMDRKQLLFRSTMVG-DDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMI 353
                  D    +F+    G DD   PL+  KSDG Y Y   DLA  + + ++   D M+
Sbjct: 294 GIAVV-SDGALCIFQDEFTGRDDAPVPLIIRKSDGGYGYATTDLATVRHRSFDLQGDRMV 352

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRH 412
           YV+G+  + + +   A A      + +   +  ++   L +DG   K   R+GD + L  
Sbjct: 353 YVVGAPQNLHFRMTWAAADKAGYIRPESTPIHVQIGSVLGKDGKMFK--TRSGDSVLLMD 410

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++ E                           VG  +V++  L   +     FDF ++   
Sbjct: 411 LLGEAVDRAAGVVSESKAEMSDEERAVVARQVGIGAVKYADLSVSHDSEYIFDFDRMLAL 470

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           +  N   Y+QYA  R RSI  +A +       ++         +  + +E  L + L +Y
Sbjct: 471 T-GNTGPYLQYAATRIRSILARAAEAGYSPAAEI---------TLGEDAERALALKLLDY 520

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+     + EP++LA YL++LA+ F   +           ++A++  +   RL L   
Sbjct: 521 GAVVAAVGESLEPHRLAGYLFELATTFTAFYEKC------PVLKADDDDVRASRLALCEL 574

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++  GL+++G+E+P +M
Sbjct: 575 TLGVLVDGLSLLGIETPEKM 594


>gi|19746992|ref|NP_608128.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|23822183|sp|Q8NZ22|SYR_STRP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19749247|gb|AAL98627.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 563

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 126/613 (20%), Positives = 247/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTIDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + +++D L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|284929097|ref|YP_003421619.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809556|gb|ADB95261.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 584

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 127/594 (21%), Positives = 234/594 (39%), Gaps = 80/594 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
            +   +D  H     N A  L++ L   P  I+++I+  + + P  ++  I G GFINL 
Sbjct: 30  QVSIAKDTRHADYQVNIAFSLAKKLKKKPQEISQIIIGNLPVSPVYETPSIGGPGFINLR 89

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   YL   +  ++      G        K+ ++F S N    MHVGH R  ++GD+L+ 
Sbjct: 90  IKKGYLEDQI-KLLCEDERLGILKTHNSQKIIVDFSSPNIAKEMHVGHLRSTIIGDSLSR 148

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKH 208
           ++ F G+++ R  ++ D G Q   L   +   +  ALY        DL   Y        
Sbjct: 149 ILEFIGHDILRLNHVGDWGTQFGMLISYLKEVFPNALYEANVLQIEDLVSFYRKAKKRFD 208

Query: 209 VGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
              +  +  + +   L    E++    K      + +  R + + +     I ++E    
Sbjct: 209 EDIQFQEISREAVVKLQLGNEEYRKAWK-----LLCEQSRREFQVIYDILQIELTERGES 263

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRP 323
             +P  + +I+++L +Q  +                  D  + +F        G+ +   
Sbjct: 264 FYNP-FLEEIVNDLDKQKIL---------------EISDGAKCVFLEGFINKSGNPLPLI 307

Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + KSDG Y Y   DLA  K +       ++IYV  +  S +  ++  +A      + + +
Sbjct: 308 VQKSDGGYNYATTDLAALKYRINIDKAKHIIYVTDAGQSNHFAQVFQIAQRAGFLREETS 367

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
           V       L +     K+  R+G+ I L+ ++D+                          
Sbjct: 368 VSHIPFG-LVKGEDGKKLKTRSGETIRLKDLLDKSIYQARKNLENRLKTENREESQEFIN 426

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  SV++  L +  +    F + K+    + N   Y+ YAYAR +SI R+ K  
Sbjct: 427 NVANVVGIGSVKYADLSQNRNSDYIFSYDKMLSL-QGNTAPYMLYAYARIKSILREEKIN 485

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           +  L+          Q    D +E+ L  +L +   VIE       P +L  YLY+L+  
Sbjct: 486 YAALE--------NTQVILQDEAEIDLAKYLLQLNEVIEIIENTLLPNRLCEYLYELSKR 537

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  + +    P L+ V +        RL L    A  +  GL+++G++    M
Sbjct: 538 FNRFYENC---PVLKSVDS----TKFSRLVLCDLTARTLELGLSLLGIDVLERM 584


>gi|159902746|ref|YP_001550090.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687135|sp|A9BDF0|SYR_PROM4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|159887922|gb|ABX08136.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 603

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 125/639 (19%), Positives = 233/639 (36%), Gaps = 93/639 (14%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLG 58
            ++   +  +   L+    +  +  K   +     +        G    N A+ LS+ L 
Sbjct: 3   NIYLALNQHICGALEAAFPQASLVAKQSGQSLNPQLVPATKPEFGDFQVNGALALSKILK 62

Query: 59  LDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSG----- 109
             P  IAE I+ ++  + D         IAG GFINL +  S L   + + +        
Sbjct: 63  KAPRKIAEEIIKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCLTTEICARLNDDHLGVP 122

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I            + ++F S N    MHVGH R  ++GD++A ++ F G+ V R  ++ D
Sbjct: 123 IAKPLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFRGHPVLRLNHVGD 182

Query: 170 AGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
            G Q   L   +     +AL      N  DL + Y     L    +   D    E++   
Sbjct: 183 WGTQFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDEDETFQDASREEVVRLQ 242

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                 +    + Q +    R + + +  + DI I+E      +   ++D+ID+L     
Sbjct: 243 NGDPQSL---KAWQLLCDQSRIEFEKIYKRLDIHITERGESFYN-QYLQDVIDDLKSTNL 298

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFK 342
           +                  +  + +F   + G D   +   + K+DG + Y   DLA  +
Sbjct: 299 L---------------VTDNGAKCIFLDDITGKDGKPLPLIVQKTDGGFNYATTDLAAIR 343

Query: 343 CKYE-----RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
            + +      G   +IYV  +  + +   +  VA   +       +       L +    
Sbjct: 344 YRLQAYPQGDGACRLIYVTDAGQASHFFAVFQVARRANWIPNDCRIEHVPFG-LVQGEDG 402

Query: 398 IKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRFMM 426
            K+  R+GD + L+ ++DE                               +G  +V++  
Sbjct: 403 KKLKTRSGDTVRLKDLLDEAIIRAKNDLEERLNAEGRKEDQEFINKVSRVIGIAAVKYAD 462

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L +       F F ++    + N   Y+ YA  R   I R+   +   ++   F      
Sbjct: 463 LSQNRITNYQFSFNRMLAL-QGNTAPYLLYALVRIAGINRKGGSLNATINKLTFN----- 516

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                +  E  L   L ++  VI        P +L  YL++L+ VF+  +       ++ 
Sbjct: 517 -----EPQEWMLARELLKFDEVILQVEEELLPNRLCNYLFELSQVFNRFYD------QVP 565

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++AN+  L   RL L    A  I  GL ++G+ + + M
Sbjct: 566 VLKAND-SLKASRLALCQLTADTIKLGLKLLGIPTLDRM 603


>gi|90961654|ref|YP_535570.1| arginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123391360|sp|Q1WU48|SYR_LACS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|90820848|gb|ABD99487.1| Arginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|300214459|gb|ADJ78875.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 563

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 141/608 (23%), Positives = 253/608 (41%), Gaps = 74/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  ++   +++       ++ IL +  IE+P+    G  +   A +LS+ L   P  IA
Sbjct: 2   DYKVKVAQVIEQAVDGKLSQEDILAK--IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I      + V   G  ++N +L    + + ILS ++  G  YG   +G G  V 
Sbjct: 59  SELVEKIDQTG-FEKVEAVGP-YVNFFLDKKEFSKDILSEVLSEGSAYGNQDLGHGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G++LA L+    Y+  +  ++ D G Q   L ++   W
Sbjct: 117 IDMSSPNIAKPMSMGHLRSTVIGNSLALLLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             ++ +  +  +    YY   + + V     D+ + E    L   +E+ L + K +  ++
Sbjct: 177 GSEEEVKADPINNLLKYYVRFHEEDVNNPELDEEAREWFKKLEDGDEEALKLWKWFREES 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K   +    LNI  D +  E  ++      + +I D L  +G + E       S+  +
Sbjct: 237 -LKKFTEVYDRLNITFDSYNGEAFYN----DKMDEITDLLQEKGLLKE-------SQGAE 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    +Y    F   +YV+G +
Sbjct: 285 IVDLEKYDL----------NPALIRKTDGATLYITRDLAAALYRYRTYDFVQSLYVVGQE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + + K+L+AV   +    +                           L E++        
Sbjct: 335 QTNHFKQLKAVLKEMGYDWSDDIHHIPFGLITSGGKKLSTRSGRVILLEEVLDDAVKLAN 394

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++ ++  +      V + VG  +V F  L  +     DF+  +V     E    YVQY+
Sbjct: 395 KQIEEKNPNLADKEEVAEAVGVGAVVFHDLKNERINSFDFNLDEVVRFEGE-TGPYVQYS 453

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI R+A D+  D D               D    Q +  LA +P  ++ A    E
Sbjct: 454 HARAMSILRKAGDLELDSD----------NLEISDPEAWQTLRLLAAFPETVKKAVSEYE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y   LA  F+ +++H R          N+      RL LV +VA+ +   L ++
Sbjct: 504 PSVVAKYAIHLAKAFNKYYAHSRIL--------NDDAEKNARLALVQSVATTLKESLRLL 555

Query: 578 GVESPNEM 585
           GV++PNEM
Sbjct: 556 GVKAPNEM 563


>gi|34762844|ref|ZP_00143829.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887500|gb|EAA24585.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 569

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 237/594 (39%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEIKNNFSCGDVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G  Y  + + +  KV I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+ +  +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGEAVCRIYKFLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                     +    D K  LF         
Sbjct: 257 GESFYNDMMGDVVKELVDK-----------KIAVDDDGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVTEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ ++        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNKNI--------EIKTDNKFEKSLATYLLVFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRALLIKKTGEVLKEGLGLLGIPVLNKM 569


>gi|296875585|ref|ZP_06899656.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433382|gb|EFH19158.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 562

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 132/619 (21%), Positives = 241/619 (38%), Gaps = 91/619 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L   +  +D    +        ++E+P+    G ++   A  L++     
Sbjct: 1   MNNKELIASELAKVIDSLDQDAILN-------LLEQPKSSDLGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +  +++ S++ +G +YG+   G 
Sbjct: 53  PQAIAADIAEKIDQSA-FEKVVATGP-YVNFFLDKSKISDQVIKSVIEAGADYGQQDEGH 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L +
Sbjct: 111 GQNITIDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKMGYNTIKINHLGDWGKQFGLLMV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +   W  ++A+  N  D     Y  +         A+  +   L+    KW   ++D   
Sbjct: 171 AYKKWGSKEAVEANPIDELLKLYVRI--------NAEIENDPELDEEGRKWFKKLEDGDP 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
            + +       + L   N  + +   E D   G+      + + +  L  +G + E    
Sbjct: 223 EATELWQWFRDESLVEFNRIYKLLGVEFDSLNGEAFYNDKMDEGVQILEDKGLLKE---- 278

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
              SK     ++D   L              + KSDG+  Y   D+A    +     F  
Sbjct: 279 ---SKGASIVELDDVNL----------PPAMIKKSDGATLYITRDIATAMYRARTYNFVK 325

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IY +G + S + ++L+AV   +    +  +++  +   + ++    K+S R G+ I   
Sbjct: 326 NIYAVGQEQSNHFRQLKAVLKKMGFDWSD-DMVHVDFGLVTKN--RQKLSTRKGNIILLE 382

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     V   VG  +V+F  L        DFD   +    
Sbjct: 383 PTLQEAISRAKAQIEEKNPELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFE 442

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    YVQYAYAR +SI R+A           F  +     S  D    ++I  L ++ 
Sbjct: 443 GE-TGPYVQYAYARIQSILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFS 491

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           RV++ A    +P  +A Y  +LA  F+ +++H R          +       RL L ++ 
Sbjct: 492 RVVKRAAENYDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERESRLALSYST 543

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GV++P +M
Sbjct: 544 AVVLKEALRLLGVDAPEKM 562


>gi|146305572|ref|YP_001186037.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166232824|sp|A4XPN9|SYR_PSEMY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145573773|gb|ABP83305.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 579

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 119/599 (19%), Positives = 229/599 (38%), Gaps = 70/599 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +     +   +   I +E  +D +HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRHLIQQALDRLTADGVLPAGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  +  V IAG GF+N + +   L + L + +    + G +  G   +V ++
Sbjct: 65  KLIAALPADAGIAKVEIAGPGFLNFFQNSDALAQRLEAALAD-AQLGVHKNGPAQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L L+      
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDWGTQFGML-LAYMQENP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A  +  +DL   Y           E AD+    ++     + + L +   ++  + +  
Sbjct: 183 AAAESELADLEGFYRAAKKRFDESPEFADRARELVVQLQAGDAECLRLWHRFNDIS-LSH 241

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +     E  ++      +  ++ +LA +G + E           Q  
Sbjct: 242 CQALYDRLGVKLSMADVKGESAYN----DDLPQVVADLAAKGLLTE-------DNGAQCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            MD  +        G+ +   + K+ G Y Y   DLA  + +      D ++Y +    +
Sbjct: 291 FMDEFK-----NAEGNPLPLIVQKAGGGYLYATTDLAATRYRAGVLKADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + + + A A       A + +       +   DG P K   R G  + L  ++DE    
Sbjct: 346 LHFQMVFACARLAGFVPASMELEHMGFGTMNGPDGRPFK--TRDGGTVKLVQLLDEAEQR 403

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  SV++  L +  +    F+F  +    + N   Y
Sbjct: 404 AYELVKSKNPELAEDELRRIARVVGIASVKYADLSKHRASDYSFNFDLMLSF-EGNTAPY 462

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R   +FR+      ++   +               E  L   LA++  ++ +  
Sbjct: 463 LLYAYTRVAGVFRKLGKGIDEIGGRIA---------LVAEQEQALAAKLAQFGELLASVA 513

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               P+ L  YLYDLA +F   + +         + A +      RL+L       +  
Sbjct: 514 DKGTPHMLCSYLYDLAGLFSSFYENC------PILAAEDEATRDSRLRLTALTGRTLKQ 566


>gi|24380431|ref|NP_722386.1| arginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|38372521|sp|Q8DRW2|SYR_STRMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|24378457|gb|AAN59692.1|AE015031_8 putative arginyl-tRNA synthase [Streptococcus mutans UA159]
          Length = 563

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 134/601 (22%), Positives = 249/601 (41%), Gaps = 77/601 (12%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           KEI   +   ++     ++E+P+  + G L+      L++ +   P  IA  +V +I  +
Sbjct: 9   KEIAAIVPALEQETILNLLEKPKKSSMGDLAFP-TFSLAKTMRKAPQIIASELVGQIN-N 66

Query: 76  PDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              + V   G  +IN +L+ S +  ++L  ++    +Y +  IG+G  + I+  S N   
Sbjct: 67  SYFEKVEAVGP-YINFFLNKSEISAQVLKEVIKKREDYAQAAIGQGHNIVIDLSSPNIAK 125

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNND 193
           P  +GH R  V+GD L+++    GYE  +  ++ D G Q   L ++   W  ++A+  + 
Sbjct: 126 PFSIGHLRSTVIGDALSNIFQKLGYETVKINHLGDWGKQFGMLIVAYKKWGSEEAVRAHP 185

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            D     Y  +  +       D+ + E    L   +E+ L + + +  +++M+  R    
Sbjct: 186 IDELLKIYVRINAETKNHPELDEEAREWFRKLENNDEEALALWQWFRDESLMEFNRL-YA 244

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L I  D +  E  ++      + +++  LA +G + E                 +   +
Sbjct: 245 ELGIDFDSYNGEAFYN----DKMEEVVQLLAEKGLLEES----------------KGAQV 284

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369
                 G +    + KSDG+  Y   DLA    +     F   IYV+G + + + K+L+A
Sbjct: 285 VNLEKYGIEHPALIKKSDGATLYITRDLAAAIYRKRTYDFAKAIYVVGQEQTAHFKQLKA 344

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------------------- 407
           V A +    ++ ++       + ++G   K+S R G+                       
Sbjct: 345 VLAEMGYAWSK-DIQHVSFGLVTKNGQ--KLSTRKGNVILLEPTIAEAVKRSLAQIDTKN 401

Query: 408 ---ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
              +    V   VG  +++F  L    +   DFD   +     E    YVQYA+AR +SI
Sbjct: 402 PDLVNKEAVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYVQYAHARIQSI 460

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A           F           DT   ++I  + ++P  I  A    EP  +A +
Sbjct: 461 LRKAD----------FQPQATENYQLNDTESWEIIKLIQDFPNTIVRAADNFEPSLIARF 510

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              LA  F+ +++H R          +N      RL L +A A+++   L ++GVE+PNE
Sbjct: 511 AIHLAQSFNKYYAHTRIL--------DNSPERDSRLALSYATATVLKEALALLGVEAPNE 562

Query: 585 M 585
           M
Sbjct: 563 M 563


>gi|125625076|ref|YP_001033559.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166232798|sp|A2RNI8|SYR_LACLM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|9295534|gb|AAF86984.1|AF282249_3 ArgS [Lactococcus lactis subsp. lactis]
 gi|124493884|emb|CAL98878.1| ArgS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071881|gb|ADJ61281.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 564

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 246/611 (40%), Gaps = 79/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L      +   ++I    +IE+P+    G L+   A  L++ L   P  IA
Sbjct: 2   DEKQLVSQALSAAIDGVLGVEQIAA--IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      + V   G  ++N +L  +    +++  ++  G  YG   IG+G  V 
Sbjct: 59  GEIAEKIDTKG-FEKVIAVGP-YVNFFLDKNATASEVIREVLAEGEHYGDANIGEGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  + N   P  +GH R  V+GD++A +    GY+  +  ++ D G Q   L  +   +
Sbjct: 117 IDMSAPNIAKPFSIGHLRSTVIGDSIAKIYEKLGYQPIKINHLGDWGKQFGLLITAYKKY 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             +  +  N  D     Y  +  +       D+   +    +   +E+ L I K +S  +
Sbjct: 177 GDEATITANPIDELLKLYVKINAEAKEDSEVDEEGRQWFLKMEQGDEEALRIWKWFSDVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     L +  D F+ E  +       +  I+++L  +  ++E       SK   
Sbjct: 237 LIEFNRI-YGKLGVTFDHFMGESFY----SDKMDAIVEDLENKNLLHE-------SKGAL 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    + +   F   +YV+G +
Sbjct: 285 IVDLEKYNL----------NPALIKKTDGATLYITRDLATAAYRKKTFNFVKSLYVVGGE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K+L+AV        +  +++      + + G   K S R G  + L   +DE   
Sbjct: 335 QTNHFKQLKAVLKEAGYDWSD-DMVHVPFGMVTQGGK--KFSTRKGHVVKLEMALDEAVD 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V+F  L    +   DFD  ++     E    YV
Sbjct: 392 RAEKQIEAKNPNLENKEEVAKQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA+AR +SI R+A       +  L            D    +++  L E+P +++ A  
Sbjct: 451 QYAHARIQSILRKANRKVNIDNISLVVS---------DAEAWEIVKALKEFPNIVKRAAD 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ +++H R       +  ++ +L   RL L+ A + ++   L
Sbjct: 502 NYEPSIIAKYAISLAQAFNKYYAHVR-------ILEDDAQL-DGRLALISATSIVLKEAL 553

Query: 575 NIIGVESPNEM 585
            ++GV +P  M
Sbjct: 554 RLLGVAAPENM 564


>gi|224825070|ref|ZP_03698176.1| arginyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224602741|gb|EEG08918.1| arginyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 572

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 124/585 (21%), Positives = 242/585 (41%), Gaps = 72/585 (12%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           ++       G    N  M  ++ L  +P  +A+ ++A + ++     + IAG GFIN++L
Sbjct: 27  VQPASKPEFGDYQANGVMAAAKQLKTNPRELAQKVLAVLDLEGIASKLEIAGPGFINIHL 86

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P++L +   + +               KV +E+ S N    MH+GH R  ++GD L  +
Sbjct: 87  NPAFLARRAETALADEALG--ITKVDAKKVMVEYSSVNLAKEMHIGHLRGGIIGDALVRV 144

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKE 212
            +F G+ V R+ ++ D G Q   L   +    +    +    DL   Y            
Sbjct: 145 NSFIGHNVVRQNHVGDWGTQFGMLVAYMVEISKSGQADLELKDLDTFYKHSKKRFDEDTA 204

Query: 213 LADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH-DIFISEDDFHRGD 269
            AD     ++     + + L + + + V+  +       + L +Q  D  +  + F+  D
Sbjct: 205 FADTARDYVVKLQSGDAEVLKLWQQF-VKLSLTHCNAIYQKLGLQLNDDDVRGESFYNDD 263

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +++ L ++G + E        +  Q   +D  +        G+     + K  G
Sbjct: 264 ---LPVLVEELRQKGLLVE-------DQGAQVVFLDEFK-----NKEGEPAAFIVQKQGG 308

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCE 387
            Y Y   DL   + +  + G D  +YV+ S  S + ++L + A        + +   +  
Sbjct: 309 GYLYATTDLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWLPEEADFQHIGH 368

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
              +  DG P+K   R+G+ + L  ++DE                           VG  
Sbjct: 369 GTIMGPDGKPLK--TRSGENVKLVELLDEAVERAFQLVTSKNPELPEAERRQIAAVVGIG 426

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++++  L +  +    FD+  +    + N   Y+QYAY R +S+FR+A+      DFD  
Sbjct: 427 ALKYADLSKSRNTDYIFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAE------DFDPA 479

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
            + +I      + +E QL V LA++  V+     + +P+ L  YLY++A++F   +    
Sbjct: 480 AKVLIT-----EVAEKQLAVVLAQFEDVVFAVADSSQPHHLCGYLYNVATLFSRFYEAC- 533

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +  +  ++   RLQL    A  + SGL ++G+E  + M
Sbjct: 534 ------PILKSEGQVRASRLQLAALTAKTLQSGLGLLGIEVLDAM 572


>gi|261403793|ref|YP_003248017.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370786|gb|ACX73535.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 566

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 143/609 (23%), Positives = 256/609 (42%), Gaps = 73/609 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   ++   LK+   K  + ++I   I +E+P +   G  S N    L++ L   P  IA
Sbjct: 2   DVKEKIIKALKD-TIKGDIGEEI--SIKLEKPPNTELGDYSVNICFKLAKLLKKSPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E IV ++K         I A  G+IN Y+  +   K L+  +            K  K+ 
Sbjct: 59  EDIVKKLKEKNIEGIKEIKAINGYINFYIDNNAFAKYLTEKICEEKSNYGRGHKKSVKII 118

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E  SANP GP+H+GH R A++GD L  ++ F GY+V   YY+ND G Q+  +   +   
Sbjct: 119 LEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQMALVVYGIELF 178

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYS 237
                   D  + E Y                  EL  KY   L    + +      +++
Sbjct: 179 GLDRNKKKDHAIAETYIKVNKYLEENPEEEEKILELMRKYEDALEKNKDTEITKKF-EFA 237

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +  I++ L  LNI+HD F+ E  + R     ++++I  L   G +           
Sbjct: 238 VNYALDGIKETLNNLNIKHDTFVWESSYVRN--GLVKEVIKKLMETGKI----------- 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 +  +  +   +  G +    L +++G+  Y   D+AY   K  +  D  I V+G
Sbjct: 285 ------IKEETYMLDLSDFGIEKKMVLARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLG 337

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +DH    + ++A    +  K     ++  E + L        MS R G FI+   +++E 
Sbjct: 338 ADHKLTAEMVKAALKLLGSKVP--EIIFYEFISLPEG----SMSTRRGRFISADELLEEA 391

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G  +VR+ +      + + F + +  +  K    F +QY
Sbjct: 392 IKRAKEECNKRDVEENIAYDIGLGAVRYNIARISPEKPMVFKWEEALDFEKVGCPF-IQY 450

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+ARC SI ++A++   + D  +F         E    E +LI  L E+  +I+ +   +
Sbjct: 451 AHARCCSILKEAENKGIE-DEAIFNY-------ELTKEEKELIKKLDEFKDIIKESAENR 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           + + LA YL +LA +F+  +++         ++  N  +   RL+LV +   ++  GL +
Sbjct: 503 KVHILANYLLELAKIFNRFYANCPIL-----LEKVNDDVKKSRLKLVKSTKIVLEIGLGL 557

Query: 577 IGVESPNEM 585
           +G+  P  M
Sbjct: 558 LGINCPGRM 566


>gi|240047288|ref|YP_002960676.1| arginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984860|emb|CAT04851.1| Arginyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 518

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/563 (30%), Positives = 284/563 (50%), Gaps = 55/563 (9%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I D   I   +   H   ++N A+IL+    L P+ +AE I  +IK + ++  V +A  G
Sbjct: 4   IFDESKIIISQSSKHADFTSNIALILAAINKLSPMELAEQISQKIKTNNNIAKVEVAKPG 63

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN ++S     +I+  I+     YG     +  K+NIEFVSANPTG +H+GH R A++G
Sbjct: 64  FINFFISNQGFVEIIQKIIKEDDCYGSQK--QNKKINIEFVSANPTGFLHLGHLRSAIIG 121

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA ++ FSG +V REYYIND G Q++ L  S+  RY Q +++ +  +P+  Y G  + 
Sbjct: 122 DVLARVLEFSGNQVLREYYINDFGVQVDRLTSSLIARYDQ-IFDKNVVMPQDSYVGEDIV 180

Query: 208 H----VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                +  E+ DK+  +  N  + +      +  +Q  +  I+ DL  L+I  D + SE 
Sbjct: 181 WGANKIYLEIGDKFQKDYKNEDKRE---FFWNKGLQIYLDEIKKDLTNLDIFFDKYSSEA 237

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           + H+   S I+  I  L                            L  +++  GDD DR 
Sbjct: 238 ELHKN--SIIKTNIKKL-------------------PGTYEQDGALWLKTSQYGDDKDRV 276

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           L+K DG YTYF AD+ Y   K    F  D +I + G+DH GYV R+++  + V E + ++
Sbjct: 277 LIKQDGKYTYFGADICYHLEKINSSFHPDLLINIWGADHIGYVDRIKSALSLVGE-QDKL 335

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +LL +LV+L ++G   KMSKR G   T++ ++     DS+R+ M+ R  + +++FD  K
Sbjct: 336 YILLYQLVKLLKNGQEFKMSKRKGSTFTIKDILKLADKDSIRYFMVERSENSIIEFDIEK 395

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           V + +++NP+F +QYAYAR   +  + +  F ++             S     E++LI  
Sbjct: 396 VNQINEQNPLFIIQYAYARSYQLLEKIQYNFNNIS------------SFNTPFEIKLINE 443

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L E+  +I   +   +   L  YL DLA+ F+  +S+ +           +       + 
Sbjct: 444 LKEFEVIIAKISHNYKINLLNKYLLDLANSFNSFYSNVKIL---------DSPRKDSLMA 494

Query: 562 LVHAVASIINSGLNIIGVESPNE 584
           +V AV  +I +GL ++G++   +
Sbjct: 495 IVKAVNIVIRNGLKLLGIQGKEK 517


>gi|152998130|ref|YP_001342965.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083538|sp|A6W2V1|SYR_MARMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150839054|gb|ABR73030.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 577

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 123/621 (19%), Positives = 242/621 (38%), Gaps = 80/621 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    + R++  +         +       ++ +      G    N  M  ++ L ++
Sbjct: 1   MNIQTLLNQRIQAAMVAAGASDTAQA------LVRQSAKVQFGDYQANGIMGAAKALKMN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+  + ++ +    + V IAG GFIN++L   +L K L+ +  S      N +   
Sbjct: 55  PCDFAQATLDKLDLSDLAEKVEIAGPGFINIFLKNVWLSKELTQLRTS-ERLDVNPVDAP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  V+GD +   + F G+ V R+ ++ D G Q   L   
Sbjct: 114 ETVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFFGHHVVRQNHVGDWGTQFGMLLAY 173

Query: 181 V-FWRYQQA-LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +   R + A +    SDL   Y          +  A +    ++     +E+ L +  ++
Sbjct: 174 MERLRSENATISMALSDLETFYRAAKTCFDEDEAFATRSRELVVALQSGDEECLALWDEF 233

Query: 237 SVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   +    +  K L +  +    + E  ++      + ++++ L  QG + E      
Sbjct: 234 -INISLTHCEETYKMLGVSLERQHVMPESAYN----DDLANVVNELKEQGLLQE------ 282

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            S   Q   M+           G+     + K+ G + Y   DLA  + +      + ++
Sbjct: 283 -SNGAQCVFMEEFA-----NKEGEITPIIVQKTGGGFLYATTDLAAVRFRQHTLNANRVL 336

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           Y + +  S + +++  ++      K   Q+  +    V +  DG P K   R+G    L 
Sbjct: 337 YFVDARQSLHFQQIFTLSRKAGFVKPETQLEHMPFGTV-MGSDGKPFK--TRSGGVAKLS 393

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            +++E                           VG  SV++  L +  +    F++  +  
Sbjct: 394 SLLEEAQERAYQLVASKNPEMDEEELRNIGRVVGIASVKYADLSKNRTSDYVFNWDSMLS 453

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+ YAY+R  SI ++++    +L  ++         S  +  E  L V L +
Sbjct: 454 F-EGNTAPYLLYAYSRVASIVKRSEIDVVNLTGEI---------SIDEPQERALAVKLCQ 503

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   I+       P+ L  YLYDLA  F   +           + A + ++   RLQL  
Sbjct: 504 FEEAIQQVANDGMPHFLCAYLYDLAGTFMTFYEAC------PILNAED-EVKHSRLQLAL 556

Query: 565 AVASIINSGLNIIGVESPNEM 585
             AS +  GL+++G+E+   M
Sbjct: 557 NTASTLKLGLSLLGIETLERM 577


>gi|291276464|ref|YP_003516236.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963658|emb|CBG39490.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 537

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 154/546 (28%), Positives = 267/546 (48%), Gaps = 57/546 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +K  L++           +  I +E P++   GH +T  A  L++     P  IAE
Sbjct: 1   MHQTIKKLLEDAL--------DVRDITLEMPKNKDFGHYATPIAFTLAKTYKKSPALIAE 52

Query: 67  LIVARIKID------------PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
            +  + +                 + V + G G+INL L  ++L  + +  + +      
Sbjct: 53  ELAKKCEDIRIQDTEILERDIEVFEKVEVIG-GYINLTLCHAFLESMANKTLKAPRREP- 110

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
               K  ++ +E+VSANPTGP+H+GH R A+ GD+LA +  F GY++  EYYINDAGAQI
Sbjct: 111 ----KKKRILLEYVSANPTGPLHIGHARGAIFGDSLAKIGKFLGYDIKTEYYINDAGAQI 166

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             L LS+    Q+ L     + PE  Y G Y+  + K   +++ +++ +    + +P + 
Sbjct: 167 QMLGLSIMLAGQEHLLKQTVEYPENSYKGEYIIDLAKLAQERFGNDVFSA---QHIPELS 223

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           ++    M++ I+ +L+ + I  D F+SE + +    S     +  L +   +YE      
Sbjct: 224 NFGKDLMLEEIKSNLEEVGITFDFFVSEKELYEEWDS----TLSLLQKNDAIYE------ 273

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                       ++   +S   GD+ DR +++ DG  TY A D+ Y   K+ RG+D+ I 
Sbjct: 274 ----------KDQKFWLKSQQFGDEKDRVIIRDDGEPTYLAGDIIYHNDKFARGYDSYIN 323

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + G+DH GY+ R+ A    +     ++ ++L ++V L +DG P KMSKRAG+FI ++ VV
Sbjct: 324 IWGADHHGYINRVLASLEHLGFDSKKLKIILAQMVSLLKDGQPYKMSKRAGNFILMKDVV 383

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            ++G D++RF  L +K    L+FD   +K+Q   NP+FY+ YA AR  ++F + +  +  
Sbjct: 384 ADIGVDALRFTFLSKKLDTALEFDIKDLKKQDSSNPIFYINYANARIHTLFEKCEKHYNF 443

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            +  L            +     L+    +  RV+ENA       K+  YL  +A  FH 
Sbjct: 444 ANISLRNLE--------NQDAYDLLFQALQLQRVLENAFEEYALQKVCEYLRGIAVSFHT 495

Query: 535 HWSHGR 540
            +++ R
Sbjct: 496 FYNNYR 501


>gi|323339717|ref|ZP_08079987.1| arginine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092796|gb|EFZ35398.1| arginine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 565

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/613 (21%), Positives = 252/613 (41%), Gaps = 79/613 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D+   + + + +         +I  +  IE P+    G  +   A +L++ L   P  
Sbjct: 1   MKDYKKVVASAVSQAVDGQLSIDEITAK--IETPKSLNLGDYAF-PAFVLAKVLRKAPQM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IA+ +V +I      + +   G  ++N +L    +   +L  ++  G  +G    GKG  
Sbjct: 58  IAQDLVEKID-HAGFEKIEAVGP-YVNFFLDKKDFSADVLGDVISKGASFGDADEGKGGN 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           V I+  S N   PM +GH R  V+G+++A L+  +GY+  +  ++ D G Q   L  +  
Sbjct: 116 VPIDMSSPNIAKPMSMGHLRSTVIGNSIAQLLEKTGYKPVKINHLGDWGTQFGKLMCAYK 175

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSV 238
            W  ++ +     D    YY   + + V     D+ + E    L   +E+   + K +  
Sbjct: 176 LWGSEEEVKKAPIDSLLRYYVRFHEEDVDHPELDEEAREWFKRLEDGDEEATKLWKWFRE 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           ++ +K+       L+I+ D +  E  ++      + ++++ L  +  ++E       S+ 
Sbjct: 236 ES-LKVFMRVYDRLDIKFDSYNGEAFYN----DKMDEVVEMLEAKNLLHE-------SQG 283

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            Q  D+ +  L              + K+DG+  Y   DLA    +     F   +YV+G
Sbjct: 284 AQIVDLSKYDL----------NPALIKKTDGATLYITRDLAAAIYRKRTYEFAQSLYVVG 333

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           ++   + K+L+AV   +    +  ++       + +DG   K+S R+G  + L  V+D+ 
Sbjct: 334 NEQKNHFKQLKAVLKEMGYDWSD-DIHHIPFGLITKDGK--KLSTRSGRIVLLEEVLDDA 390

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L        DF+  +V     E    
Sbjct: 391 VKLAQKQIEEKNPALENKAEVAEAVGVGAVVFHDLKNDRLNNFDFNLEEVVRFEGE-TGP 449

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY++AR  SI R+A +            +   +    D+   + +  LA++P  +  A
Sbjct: 450 YVQYSHARAMSILRKAGNP---------ELDAAGKYRLDDSEAWETLRLLADFPATVLKA 500

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  +A Y   LA  F+ +++H R           +      RL LV +VA ++  
Sbjct: 501 VEEYEPSVIAKYGIHLAKAFNRYYAHSRIL--------EDDDQKEARLALVKSVAEVLKE 552

Query: 573 GLNIIGVESPNEM 585
            L ++GV++P+EM
Sbjct: 553 SLRLLGVKAPDEM 565


>gi|290581362|ref|YP_003485754.1| putative arginyl-tRNA synthase [Streptococcus mutans NN2025]
 gi|254998261|dbj|BAH88862.1| putative arginyl-tRNA synthase [Streptococcus mutans NN2025]
          Length = 563

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 133/601 (22%), Positives = 249/601 (41%), Gaps = 77/601 (12%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           KEI   +   ++     ++E+P+  + G L+      L++ +   P  IA  +V +I  +
Sbjct: 9   KEIAAIVPALEQETILNLLEKPKKSSMGDLAFP-TFSLAKTMRKAPQIIASELVGQIN-N 66

Query: 76  PDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
              + V   G  +IN +L+ S +  ++L  ++    +Y +  IG+G  + I+  S N   
Sbjct: 67  SYFEKVEAVGP-YINFFLNKSEISAQVLKEVIKKREDYAQAAIGQGRNIVIDLSSPNIAK 125

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNND 193
           P  +GH R  V+GD L+++    GYE  +  ++ D G Q   L ++   W  ++A+  + 
Sbjct: 126 PFSIGHLRSTVIGDALSNIFQKLGYETVKINHLGDWGKQFGLLIVAYKKWGSEEAVRAHP 185

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            D     Y  +  +       D+ + E    L   +E+ L + + +  +++M+  R    
Sbjct: 186 IDELLKLYVRINAETKNHPELDEEAREWFRKLENNDEEALALWQWFRDESLMEFNRL-YA 244

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L I  D +  E  ++      + +++  LA +G + E                 +   +
Sbjct: 245 ELGIDFDSYNGEAFYN----DKMEEVVQLLAEKGLLEES----------------KGAQV 284

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369
                 G +    + KSDG+  Y   DLA    +     F   IYV+G + + + K+L+A
Sbjct: 285 VNLEKYGIEHPALIKKSDGATLYITRDLAAAIYRKRTYDFAKAIYVVGQEQTAHFKQLKA 344

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------------------- 407
           V A +    ++ ++       + ++G   K+S R G+                       
Sbjct: 345 VLAEMGYAWSK-DIQHVSFGLVTKNGQ--KLSTRKGNVILLEPTIAEAVKRSLAQIDTKN 401

Query: 408 ---ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
              +    V   VG  +++F  L    +   DFD   +     E    YVQYA+AR +SI
Sbjct: 402 PDLVNKEAVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGE-TGPYVQYAHARIQSI 460

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A           F           DT   ++I  + ++P  I  A    EP  +A +
Sbjct: 461 LRKAD----------FQPQAAENYQLNDTESWEIIKLIQDFPNTIVKAADNFEPSLIARF 510

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              LA  F+ +++H R          ++      RL L +A A+++   L ++GVE+PNE
Sbjct: 511 AIHLAQSFNKYYAHTRIL--------DDSPERDSRLALSYATATVLKEALALLGVEAPNE 562

Query: 585 M 585
           M
Sbjct: 563 M 563


>gi|237739425|ref|ZP_04569906.1| arginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423033|gb|EEO38080.1| arginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 569

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 130/615 (21%), Positives = 249/615 (40%), Gaps = 81/615 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  + +   +N +  +        K L  + I    +   G    N AMI S+ +G +P 
Sbjct: 4   IIKELTDIFQNLVDNLF-----PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPR 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE I A+      V+ + +AG GFIN++L+  Y+   +  I   G  Y  + + +  K
Sbjct: 59  KIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTDKYISDSIKKI---GEAYDFSFLNRKGK 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           V I+F S N    MH+GH R  ++G+++A +M + GY+V  + +I D G Q   L +   
Sbjct: 116 VIIDFSSPNIAKRMHIGHLRSTIIGESIARIMRYLGYDVVADNHIGDWGTQFGKLIVGYR 175

Query: 182 FWRYQQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            W  ++A   N  +  E  Y        K    E   +   + +   EE+   + K++  
Sbjct: 176 KWLNREAYEKNAIEELERVYVKFSEEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFIT 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           ++ +K      K L++  D +  E  ++      + D++  L  +    +          
Sbjct: 236 ES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMADVVKELEEKKLAVD-------DDG 283

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG 357
            +    D K  LF            + K DG+Y Y  +D+A  K + +    + MIY+  
Sbjct: 284 AKVVFFDEKDNLF---------PCIVQKKDGAYLYSTSDIATVKFRKDNYDVNKMIYLTD 334

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +    + K+   +   +     + ++     +  + DG+   +S R G+ I L  ++DE 
Sbjct: 335 ARQQDHFKQFFKITDMLGWDIEKYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEA 389

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  SV++  L +     + F++ K+    + N 
Sbjct: 390 HSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQSDILFEWDKMLSF-EGNT 448

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ Y YAR +SI R+  +   +L+  +       +    +  E  L  HL  +P  + 
Sbjct: 449 APYLLYTYARIQSILRKIDEQNIELNDSV-------EIKIENKIERSLATHLLTFPISVL 501

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    +P  +A YLYDL+   +  +++         +   +      R  L+     ++
Sbjct: 502 KAAETFKPNLIADYLYDLSKKLNSFYNNC-------PILNQDIDTLKSRALLIKKTGEVL 554

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G+   N+M
Sbjct: 555 KEGLSLLGIPVLNKM 569


>gi|325695318|gb|EGD37218.1| arginine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 562

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAAATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|294783524|ref|ZP_06748848.1| arginine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294480402|gb|EFG28179.1| arginine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 569

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 248/611 (40%), Gaps = 77/611 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L +  + +   +    K L  + I    +   G    N AMI S+ +G +P  IAE
Sbjct: 4   ISKELTDIFQNLVNNL-FPNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAE 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I A+      V+ + +AG GFIN++L+  YL   +  I   G  Y  + + +  KV I+
Sbjct: 63  EIKAKFPYGEIVEKLEVAGPGFINIFLTDKYLSDSIKKI---GEAYDFSFLNRKGKVIID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           F S N    MH+GH R  ++G+++A +M + GY+V  + +I D G Q   L +    W  
Sbjct: 120 FSSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVVADNHIGDWGTQFGKLIVGYRKWLN 179

Query: 186 QQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           ++A   N  +  E  Y        K    E   +   + +   EE+   + K++  ++ +
Sbjct: 180 REAYEKNAIEELERVYVKFSEEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-L 238

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K      + L++  D +  E  ++      + D++  L  +    +           +  
Sbjct: 239 KEYNKLYERLDVHFDTYYGESFYN----DMMADVVKELEEKKLAVD-------DDGAKVV 287

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
             D K  LF            + K DG+Y Y  +D+A  K + +    + MIY+  +   
Sbjct: 288 FFDEKDNLF---------PCIVQKKDGAYLYSTSDIATVKFRKDNYDVNKMIYLTDARQQ 338

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + K+   +   +     + ++     +  + DG+   +S R G+ I L  ++DE     
Sbjct: 339 DHFKQFFKITDMLGWDIEKYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRA 393

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  SV++  L +     + F++ K+    + N   Y+
Sbjct: 394 YDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQSDILFEWDKMLSF-EGNTAPYL 452

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            Y YAR +SI R+  +   +L+  +       +    +  E  L  HL  +P  +  A  
Sbjct: 453 LYTYARIQSILRKIDEQNIELNDSV-------EIKIENKIERSLATHLLTFPISVLKAAE 505

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A YLYDL+   +  +++         +   +      R  L+     ++  GL
Sbjct: 506 TFKPNLIADYLYDLSKKLNSFYNNC-------PILNQDIDTLKSRALLIKKTGEVLKEGL 558

Query: 575 NIIGVESPNEM 585
           +++G+   N+M
Sbjct: 559 SLLGIPVLNKM 569


>gi|332365316|gb|EGJ43079.1| arginine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 562

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 134/614 (21%), Positives = 244/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIASLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  I+  G +YG+   G G  + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEIIKDGADYGQQNEGNGENIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRRIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|332363700|gb|EGJ41480.1| arginine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 562

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 133/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L +I   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKIIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  TDIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEVN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPELENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|327467950|gb|EGF13440.1| arginine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 562

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 237/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQSEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q+A+  N  D     Y  +  +       D+         E+         + +    
Sbjct: 176 GSQEAVEANPIDELLKLYVRINAEIENDPSLDEEGRLWFKKLEDGDQE-----ATELWQW 230

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + L   N  +++   E D   G+      + + I  L  +G + E       SK   
Sbjct: 231 FRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SKGAS 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
             D++   L              + KSDG+  Y   D+A    +     F   +YV+G +
Sbjct: 284 IVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVVGQE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I           
Sbjct: 334 QANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLEAIS 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +V+F  L        DFD   +     E    Y+
Sbjct: 391 RAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TGPYI 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ A  
Sbjct: 450 QYAYARIQSILRKAN----------FQPDAAATYSLNDPESWEIIKLLQDFGRVVKRAAD 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++   L
Sbjct: 500 NYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLKEAL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P +M
Sbjct: 552 RLLGVEAPEKM 562


>gi|156383395|ref|XP_001632819.1| predicted protein [Nematostella vectensis]
 gi|156219881|gb|EDO40756.1| predicted protein [Nematostella vectensis]
          Length = 588

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 131/612 (21%), Positives = 249/612 (40%), Gaps = 67/612 (10%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIA 65
           + N L +   ++         I+++  ++   G    N+AM LS+ L       +P  IA
Sbjct: 7   ILNELFKQAIRVAFPAVTDPPILVQSTQNDKFGDYQCNSAMGLSQILKNNGQKANPQAIA 66

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I+A +  +  ++ V IAG GFIN++++  +++ IL  +V +G+      I    +  +
Sbjct: 67  KSIIASLPPNDLIEKVDIAGPGFINVHMNKKFIKDILRDVVANGVHPP--AIRSRQRCIV 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++G+++  L+ + G++V R  +I D G Q   L   +   +
Sbjct: 125 DFSSPNIAKEMHVGHLRSTIIGESICRLLEYVGHDVLRLNHIGDWGTQFGMLIAHLQDEF 184

Query: 186 QQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
              L  +    DL   Y     L    ++   +    ++    ++  P V+  + + +  
Sbjct: 185 PDYLEKSPPIEDLQAFYKESKTLFDSDEQFKKRAYERVVQL--QQGEPNVRK-AWEMICD 241

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + R + + L  +  + I E       P  +  +++ L  +G V                 
Sbjct: 242 VSRKEFEKLYERLGVTIIERGESFYQP-MMPQLVELLESKGKV---------------LV 285

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSG 362
            D ++++F   + G  V   ++KSDG YTY  +DLA  + + E    D +IYV  +  SG
Sbjct: 286 EDGRKVVF---VEGYKVPLTVVKSDGGYTYDTSDLAALRQRVEDERGDWIIYVTDAGQSG 342

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           +   +   A        +   +      +       K   R+G+ + L  ++DE      
Sbjct: 343 HFDLVFGAAREAGIYDPKRTRVDHVGFGVVLGEDRKKFKTRSGETVRLVDLMDEGIRRSV 402

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  V    +++  L         F F K+ +  K N   Y
Sbjct: 403 DKLKEKGRDQALSEDELRAASEAVAYGCIKYADLSHNRVGDYVFSFDKMLD-DKGNTAVY 461

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           + YAY R RSI R A      L+  +    +    S     E +L   +  +P+V+    
Sbjct: 462 LLYAYTRIRSIMRTAGMDRASLEQAIHNTEI----SLEHPKEWKLGKCITRFPQVLSRIL 517

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
                + L  +LY+LA+     +       + R    +  K+ + RL L+ A A I+ +G
Sbjct: 518 EDLLMHPLCEFLYELATTTTEFYDSCYCVEKDRQ-TGDIVKVNVDRLLLLEATARIMETG 576

Query: 574 LNIIGVESPNEM 585
            +I+G+ + N+M
Sbjct: 577 FHILGINTVNKM 588


>gi|262066244|ref|ZP_06025856.1| arginine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380057|gb|EFE87575.1| arginine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 569

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 248/611 (40%), Gaps = 77/611 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L +  + +   +    K L  + I    +   G    N AMI S+ +G +P  IAE
Sbjct: 4   ISKELTDIFQNLVDNL-FPDKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAE 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I A+      V+ + +AG GFIN++L+  Y+   +  I   G  Y  + + +  KV I+
Sbjct: 63  EIKAKFPYGEIVEKLEVAGPGFINIFLTSKYISDSIKKI---GEAYDFSFLNRKGKVIID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           F S N    MH+GH R  ++G+++A +M + GY+V  + +I D G Q   L +    W  
Sbjct: 120 FSSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVVADNHIGDWGTQFGKLIVGYRKWLN 179

Query: 186 QQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           ++A   N  +  E  Y        K    E   +   + +   EE+   + K++  ++ +
Sbjct: 180 REAYEKNAIEELERVYVKFSEEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-L 238

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K      + L++  D +  E  ++      + D++  L  +    +           +  
Sbjct: 239 KEYNKLYERLDVHFDTYYGESFYN----DMMADVVKELEEKKLAVD-------DDGAKVV 287

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
             D K  LF            + K DG+Y Y  +D+A  K + +    + MIY+  +   
Sbjct: 288 FFDEKDNLF---------PCIVQKKDGAYLYSTSDIATVKFRKDNYDVNKMIYLTDARQQ 338

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + K+   +   +     + ++     +  + DG+   +S R G+ I L  ++DE     
Sbjct: 339 DHFKQFFKITDMLGWDIEKYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRA 393

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  SV++  L +     + F++ K+    + N   Y+
Sbjct: 394 YDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQSDILFEWDKMLSF-EGNTAPYL 452

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            Y YAR +SI R+  +   +L+  +       +    +  E  L  HL  +P  +  A  
Sbjct: 453 LYTYARIQSILRKVAEQNIELNDSV-------EIKIENKIERSLATHLLTFPISVLKAAE 505

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A YLYDL+   +  +++         +   +      R  L+     ++  GL
Sbjct: 506 TFKPNLIADYLYDLSKKLNSFYNNC-------PILNQDIDTLKSRAFLIKKTGEVLKEGL 558

Query: 575 NIIGVESPNEM 585
           +++G+   N+M
Sbjct: 559 SLLGIPVLNKM 569


>gi|227890742|ref|ZP_04008547.1| arginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867680|gb|EEJ75101.1| arginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 575

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 141/608 (23%), Positives = 253/608 (41%), Gaps = 74/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  ++   +++       ++ IL +  IE+P+    G  +   A +LS+ L   P  IA
Sbjct: 14  DYKVKVAQVIEQAVDGKLSQEDILAK--IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIA 70

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I      + V   G  ++N +L    + + ILS ++  G  YG   +G G  V 
Sbjct: 71  SELVEKIDQTG-FEKVEAVGP-YVNFFLDKKEFSKDILSEVLSEGSAYGNQDLGHGGNVP 128

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G++LA L+    Y+  +  ++ D G Q   L ++   W
Sbjct: 129 IDMSSPNIAKPMSMGHLRSTVIGNSLALLLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLW 188

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             ++ +  +  +    YY   + + V     D+ + E    L   +E+ L + K +  ++
Sbjct: 189 GSEEEVKADPINNLLKYYVRFHEEDVNNPELDEEAREWFKKLEDGDEEALKLWKWFREES 248

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K   +    LNI  D +  E  ++      + +I D L  +G + E       S+  +
Sbjct: 249 -LKKFTEVYDRLNITFDSYNGEAFYN----DKMDEITDLLQEKGLLKE-------SQGAE 296

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    +Y    F   +YV+G +
Sbjct: 297 IVDLEKYDL----------NPALIRKTDGATLYITRDLAAALYRYRTYDFVQSLYVVGQE 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + + K+L+AV   +    +                           L E++        
Sbjct: 347 QTNHFKQLKAVLKEMGYDWSDDIHHIPFGLITSGGKKLSTRSGRVILLEEVLDDAVKLAN 406

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++ ++  +      V + VG  +V F  L  +     DF+  +V     E    YVQY+
Sbjct: 407 KQIEEKNPNLADKEEVAEAVGVGAVVFHDLKNERINSFDFNLDEVVRFEGE-TGPYVQYS 465

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI R+A D+  D D               D    Q +  LA +P  ++ A    E
Sbjct: 466 HARAMSILRKAGDLELDSD----------NLEISDPEAWQTLRLLAAFPETVKKAVSEYE 515

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y   LA  F+ +++H R          N+      RL LV +VA+ +   L ++
Sbjct: 516 PSVVAKYAIHLAKAFNKYYAHSRIL--------NDDAEKNARLTLVQSVATTLKESLRLL 567

Query: 578 GVESPNEM 585
           GV++PNEM
Sbjct: 568 GVKAPNEM 575


>gi|125719041|ref|YP_001036174.1| arginyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498958|gb|ABN45624.1| Arginyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 562

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 134/614 (21%), Positives = 244/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I   I      D V   G  ++N +LS + +  +++  ++  G +YG+   G G  V 
Sbjct: 58  ADIAENIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNGENVT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD+L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDSLSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDDEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLMEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEDKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|327463447|gb|EGF09766.1| arginine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 562

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|256026756|ref|ZP_05440590.1| arginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764754|ref|ZP_06524132.1| arginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716309|gb|EFD80321.1| arginyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 569

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 242/594 (40%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITIATNENFGDYQCNFAMINSKVIGDNPRKIAEKIKNNFPYGNVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G +Y  + + +  KV ++F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISDSIKKI---GEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+++  +  + GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGESVCRIYRYLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      + D++  L  +G   +        +  +    D K  LF         
Sbjct: 257 GESFYN----DMMADVVKELIDKGLAVD-------DEGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDMLDWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVAEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ ++        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNENI--------EIKTDNKFEKSLATYLLAFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRALLIKKTGKVLKDGLGLLGIPVLNKM 569


>gi|257452602|ref|ZP_05617901.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059142|ref|ZP_07923627.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684818|gb|EFS21653.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 570

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 122/593 (20%), Positives = 237/593 (39%), Gaps = 75/593 (12%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K +  + I    +   G    N AM+ S+ +G +P  IAE I   +  +  ++ + IA
Sbjct: 21  SDKEIKEVEITAATNEKFGDFQCNFAMMNSKIIGKNPRMIAEEIQQNLIENEVIEKLEIA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++L  +YL   +    +   E+  + + +   V I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLKEAYLSSFIKK--IGKEEFDFSFLDRKGDVIIDFSSPNIAKRMHIGHLRST 138

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPG 203
           ++GD +  +  + GY V  + +I D G Q   L +    W  + A   N  +  E  Y  
Sbjct: 139 IIGDAICRIYRYLGYHVVGDNHIGDWGTQFGKLIIGYHKWLDKDAYQRNAIEELERVYVK 198

Query: 204 ---VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 +H   E   +   + L   +E+   + K++   +M +  +     L++  D F 
Sbjct: 199 FSQEAEEHPELEEEARLELKKLQDGDEENYNLWKEFIKVSMEEYQKL-YDRLDVHFDTFY 257

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  +H   P  +++++D    +           +    +      ++ LF         
Sbjct: 258 GESFYHPIMPEVVKELVDKGIAK-----------EDDGAKVVFFPEEENLF--------- 297

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG++ Y  +D+A  K +      +++IY+       + K+   V   +     
Sbjct: 298 PCIVQKKDGAFLYATSDIATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVK 357

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + +V     +  + DG+    S R G+ I L  ++DE                       
Sbjct: 358 KYHVWFG--IMRFADGV---FSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQH 412

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  ++++  L +     + F++ K+    + N   Y+QY+YAR +S+  +AKD+ 
Sbjct: 413 IAEVVGVGAIKYADLSQNRQSPIIFEWDKILSF-EGNTAPYLQYSYARVQSVLDKAKDLG 471

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                D             D  E  L  ++  +P  +  A    +P  +A YLYDL+   
Sbjct: 472 KAATED-------TCLILKDKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKL 524

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +++         +   +  L   R  L      +I  GL+++G+++ + M
Sbjct: 525 NSFYNNC------PILNQEDDILK-SRAYLAKQAGEVIKQGLSLLGIQTLDRM 570


>gi|262283658|ref|ZP_06061423.1| arginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260715|gb|EEY79416.1| arginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 562

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 140/614 (22%), Positives = 240/614 (39%), Gaps = 93/614 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S L   +  +D    +        ++E+P+    G ++   A  L++     P  IA 
Sbjct: 7   IASELAKVIDSLDQDAILN-------LLEQPKSSDLGDIAFP-AFSLAKVERKAPQAIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNI 125
            IV +I      D V   G  ++N +L+ + +  +++  +V  G +YG+   GKG  V I
Sbjct: 59  DIVEKIDT-THFDKVVATGP-YVNFFLNKAEISGQVIKEVVKEGADYGQQNEGKGENVTI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DLSSPNIAKPFSVGHLRSTVIGDALSNIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
            ++A+  N  D     Y  +         A+  +   L+     W   ++D    + +  
Sbjct: 177 SKEAVEANPIDELLQLYVRI--------NAEIENDPALDDEGRLWFKKLEDGDPEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +++   E D   G+      + + I  L  +G + E       SK 
Sbjct: 229 QWFRDESLVEFNRIYELLGVEFDSLNGEAFYNDKMDEGIKILEEKGLLEE-------SKG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
               ++D   L              + KSDG+  Y   D+A    +     F   IYV+G
Sbjct: 282 ASIVNLDDVNL----------PPAMIKKSDGATLYITRDIATAMYRARTYNFVKSIYVVG 331

Query: 358 SDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
            + S + ++L+AV   +       +  +   LV   R     K+S R G+ I        
Sbjct: 332 QEQSNHFRQLKAVLKKMGFDWSDDMTHVDFGLVTKNR----QKLSTRKGNIILLEPTLQE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEDKNPELENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A D  PD + D             D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKA-DFTPDANADY---------RLNDAESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GV++P +M
Sbjct: 549 EALRLLGVDAPEKM 562


>gi|260494813|ref|ZP_05814943.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197975|gb|EEW95492.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 569

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 242/594 (40%), Gaps = 78/594 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE I         V+ + +A
Sbjct: 21  PNKELKPVEITIATNENFGDYQCNFAMINSKVIGDNPRKIAEKIKNNFPYGNVVEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G +Y  + + +  KV ++F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISDSIKKI---GEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP- 202
           ++G+++  +  + GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGESVCRIYRYLGYDVVADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      + D++  L  +G   +        +  +    D K  LF         
Sbjct: 257 GESFYN----DMMADVVKELIDKGLAVD-------DEGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDMLDWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  +  
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVAEQN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
            DL+ ++        E + D   E  L  +L  +P  +  A    +P  +A YLY+L+  
Sbjct: 471 IDLNENI--------EIKTDNKFEKSLATYLLAFPISVLKAAETFKPNLIADYLYELSKK 522

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 523 LNSFYNNC-------PILNQDIETLKSRALLIRKTGKVLKDGLGLLGIPVLNKM 569


>gi|325686756|gb|EGD28782.1| arginine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 562

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKGQIEAKNPDLENKDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|188585877|ref|YP_001917422.1| arginyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350564|gb|ACB84834.1| arginyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 566

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 133/610 (21%), Positives = 240/610 (39%), Gaps = 78/610 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F  ++   L E   +  ++ + +    +E P D   G  +      L++    +P  IA 
Sbjct: 4   FRQKIAELLLE---ETGLDLEDIKE-NVEVPPDRNLGDFAF-PCFKLAKIKKKNPAQIAS 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNI 125
            IV  I+      ++   G  +IN   +   L +  L  I   G  YG++  G G  V I
Sbjct: 59  EIVENIEAGEYFSAIEATGP-YINFTCNLEKLNQDTLERIYTQGRGYGKSSEGDGKTVVI 117

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS-VFWR 184
           +F S N   P   GH R  V+G++LA++    GY V R  ++ D G Q   L  + + W 
Sbjct: 118 DFSSPNIAKPFGFGHLRSTVIGNSLANVYETLGYNVERINHLGDWGTQFGNLIAAYLKWG 177

Query: 185 YQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPE-EKWLPIVKDYSVQAMM 242
            +Q L  +  +     Y   + +      L D+         E ++    + ++  +  +
Sbjct: 178 NEQELEKDPIEYLYDLYVKFHEEMEEDPSLKDEGREWFRKLEEGDETAEKLWEWFREMSL 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K      + L ++ D    E  ++      + D I+ +   G           S+     
Sbjct: 238 KDFERIYRKLGVKFDSNKGEAFYN----DKLEDTIETIKDSG-------IATYSQGALIV 286

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
           D++ + L              L K DG+  Y   DL     +YE   FD  +YV+G+D  
Sbjct: 287 DLNEENL----------PPCLLKKQDGATLYITRDLTAAFYRYENYQFDKALYVVGADQE 336

Query: 362 GYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
            +  ++  V   +    A+ +  +   L+R        KMS R G+ +            
Sbjct: 337 LHFNQMFNVLKKMGCDWAENMEHVPFGLIRF----QDRKMSTRKGNMVYLEDVLEKAKQL 392

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            + + VG  +V F  L     + ++FD+ K+ + + E    Y+Q
Sbjct: 393 ALETIREKNPELDNQEDIAEMVGVGAVIFGDLSNDRVKEVNFDWDKILDFNGE-TAPYLQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  S+ ++A DI P+ D D+               E  +I  LA +   ++    A
Sbjct: 452 YTHARICSVLKKA-DITPEYDKDIVK-------HLQSDYEKNVIQLLAGFTDALKRTRDA 503

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +P+ LA YL DL   F+  ++H         +     ++   RL L+ AV  ++ +GL 
Sbjct: 504 NKPHILARYLLDLGREFNRFYNHC-------PILNETEEVKQARLILIDAVRQVLANGLG 556

Query: 576 IIGVESPNEM 585
           I+G+++P  M
Sbjct: 557 IMGIKAPEAM 566


>gi|332365456|gb|EGJ43217.1| arginine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 562

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 134/614 (21%), Positives = 241/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQAIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I   I      D V   G  ++N +LS + +  +++  ++  G +YG+   G G  V 
Sbjct: 58  AYIAENIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNGENVT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N  D     Y  +         A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEANPIDELLKLYVRI--------NAEIENDPSLDDEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLMEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|157149704|ref|YP_001451306.1| arginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074498|gb|ABV09181.1| arginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 562

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 140/614 (22%), Positives = 240/614 (39%), Gaps = 93/614 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S L   +  +D    +        ++E+P+    G ++   A  L++     P  IA 
Sbjct: 7   IASELAKVIDSLDQDAILN-------LLEQPKSSDLGDIAFP-AFSLAKVERKAPQAIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNI 125
            IV +I      D V   G  ++N +L+ + +  +++  +V  G +YG+   GKG  V I
Sbjct: 59  DIVEKIDT-THFDKVVATGP-YVNFFLNKAEISGQVIKEVVKEGADYGQQNEGKGENVTI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DLSSPNIAKPFSVGHLRSTVIGDALSNIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
            ++A+  N  D     Y  +         A+  +   L+     W   ++D    + +  
Sbjct: 177 SKEAVEANPIDELLQLYVRI--------NAEIENDPALDDEGRLWFKKLEDGDPEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +++   E D   G+      + + I  L  +G + E       SK 
Sbjct: 229 QWFRDESLVEFNRIYELLGVEFDSLNGEAFYNDKMDEGIKILEEKGLLEE-------SKG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
               ++D   L              + KSDG+  Y   D+A    +     F   IYV+G
Sbjct: 282 ASIVNLDDVNL----------PPAMIKKSDGATLYITRDIATAMYRARTYNFVKSIYVVG 331

Query: 358 SDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
            + S + ++L+AV   +       +  +   LV   R     K+S R G+ I        
Sbjct: 332 QEQSNHFRQLKAVLKKMGFDWSDDMTHVDFGLVTKNR----QKLSTRKGNIILLEPTLQE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEDKNPELENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A D  PD + D             D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKA-DFTPDANADY---------RLNDAESWEIIKLLQDFSRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GV++P +M
Sbjct: 549 EALRLLGVDAPEKM 562


>gi|325689182|gb|EGD31189.1| arginine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 562

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARVQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|168186728|ref|ZP_02621363.1| arginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295327|gb|EDS77460.1| arginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 563

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 240/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    ++++   ++  +IE P     G  +      L++     P  IA
Sbjct: 2   DYKKIIAEKIKE---NVELDLNTIEG-LIEIPPKSDMGDYAF-PCFQLAKTFRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +I  +   + V + G  ++N ++    L   IL+ ++  G +YG + +GKG  V 
Sbjct: 57  EELSEKINKEG-FEKVVVLGP-YLNFFMDKGSLTYDILNRVLEEGDKYGSSEVGKGKNVT 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           I++ S N   P HVGH     +G+ L  ++ F GY      ++ D G Q   L  +   W
Sbjct: 115 IDYSSPNIAKPFHVGHLFSTSIGNALYRMLNFEGYNSIGINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             ++AL  +        Y   + +       +         L   E++ + + + +   +
Sbjct: 175 SDEKALEKDPIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKLEDGEKEEVELWERFKTLS 234

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K        L ++ D +  E  ++      + D+I  +  +G + E       S   +
Sbjct: 235 -LKEFEKVYDTLGVKFDSYAGESFYN----DKMDDVIKEIDDKGILVE-------SNGAK 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSD 359
              MD   +              ++K DG+  Y   DL A F  K    F   IYV+GSD
Sbjct: 283 VVMMDEDNI----------PPCIIVKGDGATIYATRDLAAAFYRKKNYDFYKSIYVVGSD 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K++      +    A     +   +  + D    K+S R G  I L  +++E   
Sbjct: 333 QSLHFKQVFKTIEKMGYDWAHDCKHVAFGLVRFADK---KLSTRKGQVIFLEDLLNESVS 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  K  + + F++ ++     E    YV
Sbjct: 390 KTLEVINEKNPELENKEEVAKKVGIGAVIFTYLKNKREKDIVFNWSEMLNFEGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +SI R+A +I  ++++                 E +L+  L      I NA  
Sbjct: 449 QYTYARGKSILRRAGEIGEEVNYGALNSK----------EEFELVKVLGNLEESILNAID 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  L  Y+ ++A  F+  ++          +   +      RL+LV A   +I +GL
Sbjct: 499 KLEPSILTRYIIEVAKAFNKFYNAHN------IMATEDVATKNARLKLVEATCQVIKNGL 552

Query: 575 NIIGVESPNEM 585
           N++G+E   +M
Sbjct: 553 NLLGIEVVEKM 563


>gi|331268963|ref|YP_004395455.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125513|gb|AEB75458.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 563

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 129/611 (21%), Positives = 240/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    ++++   ++  +IE P     G  +      L++     P  IA
Sbjct: 2   DYKKIIAERIKE---NVELDLNTIEG-LIEIPPKSDMGDYAFP-CFQLAKTFRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E + ++I  +   + V   G  ++N ++   S++   L+ ++  G  YG +  GKG  V 
Sbjct: 57  EELSSKIN-NEGFEKVVALGP-YLNFFMDKGSFVADTLNKVLSEGERYGSSEEGKGKNVT 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           I++ S N   P HVGH     +G++L  ++ F GY      ++ D G Q   L  +   W
Sbjct: 115 IDYSSPNIAKPFHVGHLFSTSIGNSLYRMLNFEGYNSIGINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             Q AL  +        Y   + +       +         L   E++ + + + +    
Sbjct: 175 VDQDALEKDPIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKLEDGEKEEVELWERFK-NL 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K  +   + L ++ D +  E  ++      +  +I  + ++G + E       S   +
Sbjct: 234 SLKEFKKVYELLGVKFDSYAGESFYN----DKMDSVIKEIDKKGILVE-------SNGAK 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSD 359
              MD + +              ++K DG+  Y   DL A F  K    F   IYV+GSD
Sbjct: 283 VVMMDDENM----------PPCIIVKGDGATIYATRDLAAAFYRKKNYDFYKSIYVVGSD 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K++      +    A     +   +  + D    K+S R G  I L  +++E   
Sbjct: 333 QSLHFKQVFNTIEKMGYDWANDCKHVAFGLVRFADK---KLSTRKGQVIFLEDLLNESVS 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  K  + + F++ ++     E    YV
Sbjct: 390 KTLEVINEKNPQLKNKEEVAKKVGIGAVIFTYLKNKREKDIVFNWNEMLNFEGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +SI R+A ++  +++F                 E  L+  L      +  A  
Sbjct: 449 QYTYARGKSILRRAGEVQGEVNFAALNSQ----------EEFNLVKVLGNLKEEVLGAID 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  L  Y+ D+A  F+  ++          +   +  +   RL+LV A   +I +GL
Sbjct: 499 KLEPSILTRYIIDVAKAFNKFYNAHN------IMATEDIAVKNARLKLVEATCQVIKNGL 552

Query: 575 NIIGVESPNEM 585
           +++G+E   EM
Sbjct: 553 DLLGIEVVEEM 563


>gi|332981191|ref|YP_004462632.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332698869|gb|AEE95810.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 565

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 128/616 (20%), Positives = 247/616 (40%), Gaps = 82/616 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F D   +L + L  I     +  + +   ++E P D   G  +      L++ +  +
Sbjct: 1   MMIF-DI--QLADELSAIAH---LPVQEISD-MLEIPPDRQLGDRAF-PCFKLAKTMRKN 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ I   IK    ++ +   G  ++N + + + + + +L  I+  G  YG +  G 
Sbjct: 53  PQLIAQEIADHIKKPNFIERIETKGA-YVNFFFNRAVFAQTVLEDILNKGERYGSSDKGN 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G+ + I+F + N   P H+GH R  V+G++L  +  F GY+     ++ D G Q   L  
Sbjct: 112 GSVICIDFSAPNIAKPFHIGHLRSTVIGNSLYKIYEFLGYKCIGINHLGDWGTQFGKLIT 171

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +        + ++    P      +Y+K       +      L      W   ++D   +
Sbjct: 172 AYKHW---GIKDDLEKEPIRALLDIYVKFHD----EAEKDPSLEDEARMWFKRMEDGDEE 224

Query: 240 A--MMKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293
           A  + +  +D  L+  N  +D+   + D++ G+      +  +++ L  +G + E     
Sbjct: 225 ALSLWRWFKDLSLREFNKIYDMLGVKFDYYTGESFYNDKMDRVVELLQEKGLLTE----- 279

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             S+     D+ +           D     + K+DG+  Y   D+     + E   FD  
Sbjct: 280 --SQGALVVDLSQY----------DMPPCMIKKTDGTTLYATRDITAAIYRKETFDFDKC 327

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIK------------ 399
           +YV+      + ++L  V   +      ++  +   +V +    +  +            
Sbjct: 328 LYVVAYQQDLHFRQLFKVIELMGFDWYDKLFHVPFGMVSMEEGTLSTRKGRVVFLEDVLQ 387

Query: 400 ---------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                    + ++         V  +VG  +V F  L     + + F + +V     E  
Sbjct: 388 KAVDRTLDIIKEKNPGLENKEDVAKQVGIGAVVFHDLINNRIKDIVFSWDQVLNFDGE-T 446

Query: 451 VFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
             YVQYA+AR  SI  +A + I  ++  DL            +   L+LI  LA +P  I
Sbjct: 447 GPYVQYAHARAMSILAKATQTITGEMGGDLLT----------EDETLELIDLLARFPEAI 496

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A  A EP  +A +  D+A  F+  + +         V   + +L   RL LV+A A +
Sbjct: 497 EAACQANEPSIVARHTIDIAQAFNKFYKNH-------MVIVEDDELQRARLTLVYATAQV 549

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+++P +M
Sbjct: 550 IRIGLGLLGIQAPAKM 565


>gi|219119306|ref|XP_002180416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407889|gb|EEC47824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 573

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 138/603 (22%), Positives = 232/603 (38%), Gaps = 80/603 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFIN 90
           ++        G    NAAM L++ L L P   A  IV  +  KI   ++   IAG GF+N
Sbjct: 1   MVTPATKTEFGDYQVNAAMGLAKALNLSPRECAAQIVKALQPKIQSFMEEPEIAGPGFVN 60

Query: 91  LYLSPSYLRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L    SYL + +SS+              +  K+ ++F S N    MHVGH R  ++GDT
Sbjct: 61  LRFRTSYLTQAVSSMAGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTIIGDT 120

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L +++ F+G+EVTR  ++ D G Q   L   +   Y  AL    SD  +    G  ++  
Sbjct: 121 LCNVLEFAGHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALR---SDTADDVDLGDLVQLY 177

Query: 210 GKELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               A K   E   F       +VK     +  + A   +     K     +D    E  
Sbjct: 178 KA--AKKRFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGL 235

Query: 265 FHRGDPSP---IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             RG+      ++D++D L  +G   E       S       ++       +   G  + 
Sbjct: 236 VERGESFYNPFLKDVVDELVEKGLAVE-------SDGALVVYLEGY-----TNRDGSPLP 283

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERG-------FDNMIYVMGSDHSGYVKRLEAVAAAV 374
             + KSDG + Y   DLA  + +            D ++YV  +  + + + +       
Sbjct: 284 MIVRKSDGGFNYATTDLAAMRHRTLMPRAESGERADRVLYVTDAGQAQHFEMVFEAGKVA 343

Query: 375 SE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
               + A +  +   LV+   DG   K + R+G+ + L+ ++DE                
Sbjct: 344 GFCREGASLEHVPFGLVQ-GEDGK--KFATRSGETVKLKDLLDEAVRISGADLKKRNENV 400

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         VG  +V++  L         F + ++      N   Y+ YAYAR  
Sbjct: 401 DQEFLDRVDNVARIVGIGAVKYADLSMNRESNYRFSYDRMLSL-NGNTAPYMLYAYARVC 459

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            I R+A         D    + I        SEL+LI +L + P V+        P ++ 
Sbjct: 460 GIIRKASGQEGTGAIDWPKASEI---MITHESELELIRNLVKLPDVLNEVERELYPNRMC 516

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL++ +  F+  +     N      +A + ++   RL L  A A  I   L ++G+E+ 
Sbjct: 517 DYLFETSQKFNQFYESCSVN------KAESEEIKASRLSLCTATAGTIRLLLTLLGIETL 570

Query: 583 NEM 585
            +M
Sbjct: 571 EKM 573


>gi|226311784|ref|YP_002771678.1| arginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094732|dbj|BAH43174.1| arginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 571

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 135/614 (21%), Positives = 250/614 (40%), Gaps = 80/614 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           +  ++   +      + V+    + +  ++E P + A G ++      L++ L   P  I
Sbjct: 3   YKHQVAEKIAAALSSMGVDTLTKEAVYGMLETPPNPAMGDVAFP-CFQLAKALRKAPPMI 61

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
           A  +  ++   P  +S    G  ++NL+L       +++ +I+  G  YG + +G+G KV
Sbjct: 62  AAELAGQLSGAPLRES-HAVGP-YVNLFLDQENVAEQVIGTILTQGSTYGSSHVGEGRKV 119

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I+  S N   P  +GH R  V+G+ +A++M   GY+  R  ++ D G Q   L ++   
Sbjct: 120 PIDLSSPNIAKPFSMGHLRSTVIGNAIANIMEKQGYDPVRINHLGDWGTQFGKLIVAYRL 179

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
              +A    +   P      +Y++       +  +   L     +W   ++  D   Q +
Sbjct: 180 WGDEAKVKAE---PIKELLSLYVRFH----EEVENDPTLEDQGREWFKKLEDGDEEAQHL 232

Query: 242 MKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
            K  RD+ LK     +D+     D   G+      +  ++  L  +G + E       S 
Sbjct: 233 WKWFRDESLKEFMKIYDLMNVAFDSTHGEAFYNDKMDRVVTLLEEKGLLTE-------SD 285

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
                ++D   +              + KSDG+  Y   DLA    ++E   F   +YV+
Sbjct: 286 GAMVVNLDEYNM----------PPCLIKKSDGATLYATRDLAAALFRHESYDFAKALYVV 335

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G++   + ++L  V   +    +  N+       + +DG   KMS R G  +        
Sbjct: 336 GNEQRLHFQQLYKVLEKMGYAWSA-NMHHIPFGMMLKDGK--KMSTRKGKVVLLEEVLAQ 392

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                            T   V  +VG  +V F  L       ++F + ++     E   
Sbjct: 393 AISDVQKVIEEKNPTLSTKEEVARQVGVGAVIFHDLKNFRLNDVNFSWEEMLTFEGE-TG 451

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQYA+AR  S+ R+     P    +L    +  +E+        +I  L  +P VIE 
Sbjct: 452 PYVQYAHARACSLLRRGG-YQPATTVNLASGALDSKEA------WAVITLLNAFPEVIER 504

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P ++  Y+ DLA  F+  +++ R       + A    +T  RLQLV AV +++ 
Sbjct: 505 AADNFDPSQIGKYVIDLAQTFNKFYANVR-------ILAEEEDVTASRLQLVAAVVAVLK 557

Query: 572 SGLNIIGVESPNEM 585
            GL ++G+ +P EM
Sbjct: 558 EGLRLLGLAAPEEM 571


>gi|324989672|gb|EGC21616.1| arginine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 562

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 241/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N  D     Y  +         A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEANPIDELLKLYVRI--------NAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEEKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKGQIEAKNPDLENKDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHMRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|146319780|ref|YP_001199492.1| arginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321977|ref|YP_001201688.1| arginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752763|ref|YP_003025904.1| arginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754588|ref|YP_003027729.1| arginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756521|ref|YP_003029661.1| arginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166232848|sp|A4W4J9|SYR_STRS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232849|sp|A4VYA3|SYR_STRSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145690586|gb|ABP91092.1| Arginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692783|gb|ABP93288.1| Arginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251817052|emb|CAZ52704.1| arginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818985|emb|CAZ56832.1| arginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820834|emb|CAR47600.1| arginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292559386|gb|ADE32387.1| Arginyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319759181|gb|ADV71123.1| arginyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 562

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 135/611 (22%), Positives = 239/611 (39%), Gaps = 85/611 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L  I   ++VE       ++E+P+    G ++   A  L++     P  IA  
Sbjct: 4   KQVIAERLAAILPSLEVEAIYN---LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           IV ++      ++V   G  ++N +L  + +  ++L+ ++    +YG+  IG+G  V I+
Sbjct: 60  IVEKLDTTG-FENVVATGP-YVNFFLDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N   P  VGH R  V+GD LA++    GY+  R  ++ D G Q   L ++      
Sbjct: 118 MSSPNIAKPFSVGHLRSTVIGDALANIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGD 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMK 243
           +A    D   P      +Y++      A+      L+    +W   ++D    + +    
Sbjct: 178 KAAVEAD---PISELLKLYVR----INAEAEEKPELDDEARQWFKKLEDGDPEAHELWQW 230

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + L   N  +D      D + G+      + + I  L  +G + E       SK  +
Sbjct: 231 FRDESLVEFNRIYDKLDVTFDSYNGEAFYNDKMDEGIQILEEKGLLQE-------SKGAK 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D++   L              ++K+DG+  Y   D+A    +     F   IYV+G +
Sbjct: 284 IVDLESYNL----------PPALIMKTDGATLYITRDMATAMYRKRTYDFVKSIYVVGQE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              + K+L+AV   +    +  ++       + +D    K+S R G+ I           
Sbjct: 334 QINHFKQLKAVLKEMDFDWSD-DMTHITFGLVTKDKK--KLSTRKGNIILLEPTLDEAIS 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +V+F  L        DFD   +     E    YV
Sbjct: 391 RALTQIEAKNPDLENKEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR +SI R+A           F  N        DT   ++I H+  +  V+E A  
Sbjct: 450 QYAYARIQSILRKAN----------FVPNAENDYKLADTESWEIIKHIQNFSAVVERAGD 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A Y  +LA  F+ +++H R          +       RL L +A   ++   L
Sbjct: 500 KFDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERDSRLALAYATGLVLKEAL 551

Query: 575 NIIGVESPNEM 585
            ++GV++P +M
Sbjct: 552 RLLGVKAPEKM 562


>gi|284028534|ref|YP_003378465.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283807827|gb|ADB29666.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 562

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 124/576 (21%), Positives = 220/576 (38%), Gaps = 75/576 (13%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
               GH  TN A+ L++ LG  P  +A  +VA  ++D       IAG GF+NL L PS L
Sbjct: 33  KPEFGHFQTNLALRLAKTLGTSPRAVAAELVAHAELDDLCAPAQIAGPGFVNLTLLPSTL 92

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              ++       E  R+L   G +V +++   N    MHVGH R  V+GD L +++ ++G
Sbjct: 93  AAGVN-------ELPRSLPTTGRRVVVDYSQPNVAKQMHVGHLRSTVIGDALCNVLRYAG 145

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YEV R+ ++ D G Q   +   +          +  ++ + Y             AD+  
Sbjct: 146 YEVVRQNHVGDWGTQFGMMVEQLLDEQTPVESLDLEEMQQLYQRSRKHFDSDPVFADRSR 205

Query: 219 SELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALN--IQHDIFISEDDFHRGDPSPIRD 275
             ++     +     +    V   +         L   +     + E  ++      ++ 
Sbjct: 206 RRVVLLQSGDPRTRGIWQQLVDISLAEFDRVYALLGSPLTQADVVGESAYN----DALQG 261

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYT 332
           I+ +LA  G + E                   Q  F     G D   +   + KSDG + 
Sbjct: 262 IVSDLAAAGLLTES---------------GGAQCAFLPGFTGRDGSPLPVIVQKSDGGFG 306

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVR 390
           Y A DLA  + +  +   D ++YV+    S + +++ A+A          +   +     
Sbjct: 307 YSATDLAAVRHRVRDLKADRIVYVVDHRQSLHFQQIFALARTARWLPETTSAEHVAFGTV 366

Query: 391 LYRDGMPIKMSK---------------RAG------DFITLRHVVDEVGSDSVRFMMLWR 429
           L  DG P K                  RAG        I    V   VG  +V++  L  
Sbjct: 367 LGPDGKPFKTRDGGTVSLVSLLDAAIARAGALLADRTGIDRESVARAVGIGAVKYADLSS 426

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             +    FD  ++   +  N   Y+QYA+AR   +  +A      +              
Sbjct: 427 DRTNDYVFDLDRMVAMT-GNTGPYLQYAHARLTRLLSKAGHPEGQVTV------------ 473

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             + +E +L + LA +   ++      +P++L  YLYD+AS     +      P      
Sbjct: 474 LAEPAEQRLALLLAGFGDAVQQVAETLQPHRLCTYLYDVASALSAFYESCPVLP------ 527

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +    RL L  A  ++++ GL ++G+ +P+ M
Sbjct: 528 -SEGETRTSRLALCTATRTVLHDGLALLGITAPDAM 562


>gi|323350712|ref|ZP_08086373.1| arginine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123132|gb|EFX94823.1| arginine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 562

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDTILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEDKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FHPDAKATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|94993337|ref|YP_601436.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123257687|sp|Q1J9B9|SYR_STRPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94546845|gb|ABF36892.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 563

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 125/613 (20%), Positives = 246/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + +  ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA + A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+  +   ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAETDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + +++D L  +  + E          
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                  +   +      G +    + KSDG+  Y   DLA    +     F   +YV+G
Sbjct: 280 -------KGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLALCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++ V++PNEM
Sbjct: 551 ALRLLSVDAPNEM 563


>gi|324992656|gb|EGC24577.1| arginine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995815|gb|EGC27726.1| arginine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|325697259|gb|EGD39145.1| arginine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327460059|gb|EGF06398.1| arginine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327472205|gb|EGF17642.1| arginine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327488649|gb|EGF20449.1| arginine--tRNA ligase [Streptococcus sanguinis SK1058]
 gi|332360168|gb|EGJ37982.1| arginine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 562

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  ADIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEDKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPELENKDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARIQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|328944750|gb|EGG38911.1| arginine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 562

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 87/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L ++   +  +  IL+  ++E+P+    G ++   A  L++     P  IA
Sbjct: 2   DNKQLIAGELAKVIDSLD-QDAILN--LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      D V   G  ++N +LS + +  +++  ++  G +YG+   G    + 
Sbjct: 58  TDIAEKIDT-AHFDKVVATGP-YVNFFLSKAEISGQVIKEVIKDGADYGQQNEGNNQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDLSSPNIAKPFSVGHLRSTVIGDALSNIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             Q+A+  N    P      +Y++      A+  +   L+     W   ++D    + + 
Sbjct: 176 GSQEAVEAN----PIDELLKLYVR----INAEIENDPSLDEEGRLWFKKLEDGDPEATEL 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
                 + L   N  +++   E D   G+      + + I  L  +G + E       SK
Sbjct: 228 WQWFRDESLTEFNRIYELLGVEFDSLNGEAFYNDKMDEGIQILEDKGLLQE-------SK 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
                D++   L              + KSDG+  Y   D+A    +     F   +YV+
Sbjct: 281 GASIVDLEDFNL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVKNVYVV 330

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I        
Sbjct: 331 GQEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLLE 387

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V   VG  +V+F  L        DFD   +     E   
Sbjct: 388 AISRAKSQIEAKNPDLENKDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TG 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ 
Sbjct: 447 PYIQYAYARVQSILRKAN----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKR 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y   LA  F+ +++H R          +       RL L ++ A ++ 
Sbjct: 497 AADNYEPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYSTAVVLK 548

Query: 572 SGLNIIGVESPNEM 585
             L ++GVE+P +M
Sbjct: 549 EALRLLGVEAPEKM 562


>gi|301300427|ref|ZP_07206628.1| arginine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851970|gb|EFK79653.1| arginine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 563

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/608 (22%), Positives = 253/608 (41%), Gaps = 74/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  ++   +++       ++ IL +  IE+P+    G  +   A +LS+ L   P  I 
Sbjct: 2   DYKVKVAQVIEQAVDGKLSQEDILAK--IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIT 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I      + V   G  ++N +L    + + ILS ++  G  YG   +G G  V 
Sbjct: 59  SELVEKIDQTG-FEKVEAVGP-YVNFFLDKKEFSKDILSEVLSEGSAYGNQDLGHGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G++LA L+    Y+  +  ++ D G Q   L ++   W
Sbjct: 117 IDMSSPNIAKPMSMGHLRSTVIGNSLALLLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             ++ +  +  +    YY   + + V     D+ + E    L   +E+ L + K +  ++
Sbjct: 177 GSEEEVKADPINNLLKYYVRFHEEDVNNPELDEEAREWFKKLEDGDEEALKLWKWFREES 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K   +    LNI  D +  E  ++      + +I D L  +G + E       S+  +
Sbjct: 237 -LKKFTEVYDRLNITFDSYNGEAFYN----DKMDEITDLLQEKGLLKE-------SQGAE 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++ +L              + K+DG+  Y   DLA    +Y    F   +YV+G +
Sbjct: 285 IVDLEKYEL----------NPALIRKTDGATLYITRDLAAALYRYRTYDFVQSLYVVGQE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + + K+L+AV   +    +                           L E++        
Sbjct: 335 QTNHFKQLKAVLKEMGYDWSDDIHHIPFGLITSGGKKLSTRSGRVILLEEVLDDAVKLAN 394

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++ ++  +      V + VG  +V F  L  +     DF+  +V     E    YVQY+
Sbjct: 395 KQIEEKNPNLADKEEVAEAVGVGAVVFHDLKNERINSFDFNLDEVVRFEGE-TGPYVQYS 453

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI R+A D+  + D               D    Q +  LA +P  ++ A    E
Sbjct: 454 HARAMSILRKAGDLELNSD----------NLEISDPEAWQTLRLLAAFPETVKKAVSEYE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y   LA  F+ +++H R          N+      RL LV +VA+ +   L ++
Sbjct: 504 PSVVAKYAIHLAKAFNKYYAHSRIL--------NDDAEKNARLALVQSVATTLKESLRLL 555

Query: 578 GVESPNEM 585
           GV++PNEM
Sbjct: 556 GVKAPNEM 563


>gi|126695545|ref|YP_001090431.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126542588|gb|ABO16830.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 604

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 131/632 (20%), Positives = 232/632 (36%), Gaps = 84/632 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIFKKNPR 65

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILS---SIVVSGIEYGRN 115
            I+   +  +K +        S+ IAG GFIN+ L    L   +        +GI   R 
Sbjct: 66  DISNDFINLLKKNKSIAKLCKSLEIAGPGFINIKLKDEVLINEIISNIQCNRAGIPLIRK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            + +G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D G Q
Sbjct: 126 DLDRGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L   +   Y   L        SDL E Y           E   +   E++   +   
Sbjct: 186 FGMLITQLKDLYSNDLEEIGKIKISDLVEFYKESKKRFDNESEFQKRSREEVVKL-QSGD 244

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +  +K  + + +    R +   +     I I E      +P  ++ +ID+L  +  + E 
Sbjct: 245 IKSIK--AWKLLCDQSRQEFDEIYKNLKIKIEERGESFYNP-FLKSVIDDLNLKKILVE- 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-- 347
                  +  +   +D       +   G  +   + K DG + Y   DLA  + ++ +  
Sbjct: 301 ------DQGAKCVFLDG-----MTNKEGKPLPLIIQKKDGGFNYATTDLAAIRYRFNKPP 349

Query: 348 ---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                  +IYV     + +   +  VA           V       L +     K+  R 
Sbjct: 350 NGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPENCQVDHVPFG-LVQGIDGKKLKTRE 408

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           G+ I L+ +++E                               +G  +V++  L +    
Sbjct: 409 GETIRLKDLLNEAVRRAKEDLLKRLEDEDRYENEEFIANTSRIIGFGAVKYADLSQNRIT 468

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+      N   Y+ Y   R   I R+   ++   DF              + 
Sbjct: 469 NYQFSFDKMLSL-NGNTAPYLLYTLVRILGIKRKNDFVYDSKDFQYVNYE--------NK 519

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +LI  L ++  VI +      P +L  YL++L   F+  +    + P L+      +
Sbjct: 520 SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYD---QVPILK----EEK 572

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + RL L    A  +   L ++G+E+   M
Sbjct: 573 NIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|257466459|ref|ZP_05630770.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917616|ref|ZP_07913856.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691491|gb|EFS28326.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 570

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 123/593 (20%), Positives = 237/593 (39%), Gaps = 75/593 (12%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K +  + I    +   G    N AM+ S+ +G +P  IAE I   +  +  ++ + IA
Sbjct: 21  SDKEIKEVEITAATNEKFGDFQCNFAMMNSKIIGKNPRMIAEEIQQNLIENEVIEKLEIA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++L  +YL   +    +   E+  + + +   V I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLKEAYLSSFIKK--IGKEEFDFSFLDRKGDVIIDFSSPNIAKRMHIGHLRST 138

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPG 203
           ++GD +  +  + GY V  + +I D G Q   L +    W  + A   N  +  E  Y  
Sbjct: 139 IIGDAICRIYRYLGYHVVGDNHIGDWGTQFGKLIIGYHKWLDKDAYQRNAIEELERVYVK 198

Query: 204 ---VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 +H   E   +   + L   +E+   + K++   +M +  +     L++  D F 
Sbjct: 199 FSQEAEEHPELEEEARLELKKLQDGDEENHNLWKEFIKVSMEEYQKL-YDRLDVHFDTFY 257

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  +H   P  +++++D    +           +    +      ++ LF         
Sbjct: 258 GESFYHPIMPEVVKELVDKGIAK-----------EDDGAKVVFFPEEENLF--------- 297

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG++ Y  +D+A  K +      +++IY+       + K+   V   +     
Sbjct: 298 PCIVQKKDGAFLYATSDIATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVK 357

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + +V     +  + DG+    S R G+ I L  ++DE                       
Sbjct: 358 KYHVWFG--IMRFADGV---FSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQH 412

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  ++++  L +     + F++ K+    + N   Y+QY+YAR +S+  +AKD+ 
Sbjct: 413 IAEVVGVGAIKYADLSQNRQSPIIFEWDKILSF-EGNTAPYLQYSYARVQSVLDKAKDLG 471

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                D             D  E  L  ++  +P  +  A    +P  +A YLYDL+   
Sbjct: 472 KAATED-------TCLILKDKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKL 524

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +++         +   +  L   R  L      II  GL+++G+++ + M
Sbjct: 525 NSFYNNC------PILNQEDDILK-SRAYLAKQAGEIIKQGLSLLGIQTLDRM 570


>gi|310658453|ref|YP_003936174.1| arginyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|308825231|emb|CBH21269.1| Arginyl-tRNA synthetase 2 (Arginine--tRNA ligase 2) (ArgRS 2)
           [Clostridium sticklandii]
          Length = 566

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 126/612 (20%), Positives = 234/612 (38%), Gaps = 79/612 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L E       E+ +    +IE P + A G  +      L++     P  IA
Sbjct: 2   DFKVEVSKILSEKISDFSYEEILS---MIEIPPNAAMGDFAF-PCFKLAKTYRKSPNIIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +   +     + S+  AG G++N Y+    L  +++  ++    ++G+  IG G  V 
Sbjct: 58  QELAQELNRPSYLKSIENAG-GYVNFYVDTILLSSQVIKEVLEKKEDFGKMDIGSGKNVI 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +EF S N   P H+GH R  V+G++L  L  F GY      ++ D G Q   L ++   W
Sbjct: 117 VEFSSPNIAKPFHIGHIRTTVIGNSLYKLYKFLGYNTIGINHLGDYGTQFGKLIVAYKGW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             ++ + N         Y   + K       +  + E    L   +E+   + K +   +
Sbjct: 177 GNEEEVKNAPIKTLLKLYIEYHEKAEANPQMEDEAREWFKKLEDGDEEATRLWKFFREVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R     L I  D +  E  +       +  +I+ +  +G + E       S+   
Sbjct: 237 LEEFSRV-YDMLGISFDSYAGESFY----SDKMPAVIELMEEKGVLIE-------SQGAH 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D++   +              + K DGS  Y   DLA    + +   F   IYV+GS 
Sbjct: 285 IVDLEPYGM----------PPALIKKRDGSTLYITRDLAAAIYRKKTYDFYKNIYVVGSQ 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---- 415
            + + K+   +   +  + A     +   +    +G    +S R G  + L  V++    
Sbjct: 335 QALHFKQWMKILDLMGFEWANDCEHVQFGMVGLEEGT---LSTRKGRVVFLEDVLNQAIQ 391

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                ++G  +V F  L     +   F + +      E    YV
Sbjct: 392 KTKEVIIEKNPNLEDIDKVAKQIGVGAVVFQELSNSRIKDYTFSWERTLSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           QY +AR  S+ R+A      ++DF +   N            +++I  L  +  V+  A 
Sbjct: 451 QYTHARACSVLRKANLKPSSEIDFSMLGNN---------NDAMEVIRVLGSFKSVLLRAA 501

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP+ +  Y+ DLA  F+  +           +  ++ K+   RL +V AV   + + 
Sbjct: 502 DKNEPHHITRYILDLAQAFNKFYHDN-------PILVDDEKVKAARLAIVEAVRIGLENS 554

Query: 574 LNIIGVESPNEM 585
           L ++G+E+P  M
Sbjct: 555 LKLLGMEAPERM 566


>gi|282897066|ref|ZP_06305068.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9]
 gi|281197718|gb|EFA72612.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9]
          Length = 585

 Score =  391 bits (1006), Expect = e-106,   Method: Composition-based stats.
 Identities = 134/568 (23%), Positives = 220/568 (38%), Gaps = 71/568 (12%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           +   G    N A+ LS+ LG+DP +IA  IV  + +    +   IAG GFINL L  SYL
Sbjct: 36  NPKFGDFQANVALSLSKKLGMDPRSIAAAIVEELDVSDLCEVPEIAGPGFINLKLQISYL 95

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              L++I       G   + +  K  ++F S N    MHVGH R  ++GD +A ++ F G
Sbjct: 96  ESQLNAIKTD-PRLGVPRVDQPQKQIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRG 154

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELA 214
           ++V R  ++ D G Q   L   +   Y QAL      N  DL   Y              
Sbjct: 155 HQVLRLNHVGDWGTQFGMLIAYLREVYPQALTTANVLNIGDLVSFYRQAKQRFDADPTFQ 214

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +    E++             ++   +    R + + +    DI I E      +P  + 
Sbjct: 215 EIARQEVVRLQAGAEDTT---HAWNLLCAQSRKEFQTIYDLLDIKIVERGESFYNP-FLS 270

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            I+++L + G V E        +  +   ++       +   G+ +   + KSDG Y Y 
Sbjct: 271 KIVEDLEKAGLVEEN-------QGAKCVFLEG-----FTNREGEALPLIVQKSDGGYNYA 318

Query: 335 AADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLY 392
             DLA    +  E     +IYV  +  + +  +   VA         +  V +   + L 
Sbjct: 319 TTDLAALLYRIREDHAKRIIYVTDAGQANHFAQFFQVAQKAGWIPDDVELVHIPFGLVLG 378

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSDS 421
            DG   K   R+GD + L+ ++DE                               VG  +
Sbjct: 379 EDGK--KFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIHNVAQTVGISA 436

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V++  L +  +    F + K+    K N   Y+ YAY R + I R+ K  F +L  D   
Sbjct: 437 VKYADLSQNRTSSYVFSYDKMLSL-KGNTAPYMLYAYVRTQGISREGKIDFENLAPD--- 492

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             +I QE     +EL L  HL +   ++        P +L  YLY L+  F+  +     
Sbjct: 493 AKIILQE----ETELALAKHLLQLDDILYQVEQDLLPNRLCEYLYSLSEKFNKFYDRC-- 546

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASI 569
                 ++  +  +   RL L +  A  
Sbjct: 547 ----PVLKTEDP-IRTSRLMLCYVTART 569


>gi|241121693|ref|XP_002403306.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493415|gb|EEC03056.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 662

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 128/602 (21%), Positives = 243/602 (40%), Gaps = 92/602 (15%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGK 86
           + +    +   G    NAAM LS+ L        P+ +A+ IVA +  +  V  + +AG 
Sbjct: 105 VPVLPSSNEKFGDYQCNAAMPLSQALKKAGKPMSPVEVAKRIVAEVPANDVVAEMSLAGP 164

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           GFIN+ LS SY+      I+  G+       G   +V ++  S N    MHVGH R  ++
Sbjct: 165 GFINVTLSGSYVAASARRILTDGV-LPPPQAGPRKRVIVDLSSPNIAKEMHVGHLRSTII 223

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G++L+ L+ F G++V R  ++ D G Q   L   +  R+   L ++    P G     Y 
Sbjct: 224 GESLSRLLEFVGHDVLRLNHVGDWGTQFGMLIAHLKDRFPDYLVHSP---PIGDLQAFYK 280

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDY--------SVQAMMKIIRDDLKALNIQHDI 258
           +   +  +D+       F +  +  +VK          + + +  + R + + +  + D+
Sbjct: 281 ESKVRFDSDE------EFKKRAYACVVKLQSHDPDMMSAWKLICDVSRQEFQKIYERLDV 334

Query: 259 FISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            + E    F++     + +++ +L  +G++ E                D ++++F     
Sbjct: 335 SLIERGESFYQ---DMMTEVVKDLDERGFLEED---------------DGRKVMF---GP 373

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           G  V   ++KSDG +TY  +D+A  + + ++   D ++YV  +  + +   + A A    
Sbjct: 374 GQPVPLTVVKSDGGFTYDTSDMATIRHRVQQERADWIVYVTDAGQAQHFNTIFACAKKAG 433

Query: 376 E---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
                K +++  +   V L  D    K   R+GD + L  ++DE                
Sbjct: 434 YVDTSKVRLDHCVF-GVVLGEDKK--KFKTRSGDTVKLTDLLDEGLRRSLQKLHEKEREK 490

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        V    +++  L         F F ++ +  + N   Y+ YA  R RS
Sbjct: 491 VLTPEELKRAQEAVAYGCIKYADLSHNRVHEYVFSFDRMLD-DRGNTAAYLLYALTRIRS 549

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R        +  D      +P E      E +L   L  +P VI         + L  
Sbjct: 550 IARNVG-----MSVDALKDEEVPVEH---PKERKLAKTLLRFPEVISTMLEELHVHPLCD 601

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL++L+  F   + +     + +       K+   RL L  A A+++  G +I+G+++  
Sbjct: 602 YLFELSQTFSEFYDNCYCIEKDKA-TGQVVKVNKGRLLLCEATAAVMTKGFHILGIKTVE 660

Query: 584 EM 585
            M
Sbjct: 661 RM 662


>gi|270291958|ref|ZP_06198173.1| arginine--tRNA ligase [Streptococcus sp. M143]
 gi|270279486|gb|EFA25328.1| arginine--tRNA ligase [Streptococcus sp. M143]
          Length = 562

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 133/619 (21%), Positives = 243/619 (39%), Gaps = 91/619 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  +        ++E+P++   G ++   A  L++     
Sbjct: 1   MSTKKLIASELASVIDSLDQEAILN-------LLEQPKNSDMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I  +I      + V   G  ++N +L  S +   ++  I+  G +Y +   GK
Sbjct: 53  PQMIAAEIAEKIN-SQAFEKVVATGP-YVNFFLDKSAISGAVIKEIIEKGSDYAQQTEGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + I+  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L +
Sbjct: 111 EQNITIDLSSPNIAKPFSVGHLRSTVIGDALSNIFKKMGYNTIKINHLGDWGKQFGLLMV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +   W  ++A+  N    P      +Y++      A+  +   L+     W   ++D   
Sbjct: 171 AYKKWGSKEAVEAN----PIDELLKLYVR----INAEIENDPALDEEGRLWFKKLEDGDP 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
            + Q       + L   N  + +   E D   G+      + + +  L  +G + E    
Sbjct: 223 EATQLWQWFRDESLVEFNRIYKLLNVEFDSLNGEAFYNDKMDEAVQILEEKGLLEE---- 278

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
              S+     ++D  +L              + KSDG+  Y   D+A    +     F  
Sbjct: 279 ---SRGASIVNLDDVEL----------PPAMIKKSDGATLYITRDIATAIYRARTYNFVK 325

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IY +G + S + K+L+AV   +    +  +++  +   + ++    K+S R G+ I   
Sbjct: 326 NIYAVGQEQSNHFKQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLE 382

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     V   VG  +V+F  L        DFD   +    
Sbjct: 383 PTLQEAISRAKAQIEAKNPDLENKEQVAQAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFE 442

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    Y+QYAYAR +S+ R+A           F  N     S  D    ++I  L ++ 
Sbjct: 443 GE-TGPYIQYAYARIQSLLRKAD----------FQPNAQANYSLNDAESWEIIKLLQDFA 491

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           RVI+ A++  +P  +A Y   LA  F+ +++H R          +       RL L +A 
Sbjct: 492 RVIKRASVNYDPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYAT 543

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GVE+P +M
Sbjct: 544 AVVLKEALRLLGVEAPEKM 562


>gi|302024623|ref|ZP_07249834.1| arginyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330833730|ref|YP_004402555.1| arginyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307953|gb|AEB82369.1| arginyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 562

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 236/611 (38%), Gaps = 85/611 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L  I   ++VE       ++E+P+    G ++   A  L++     P  IA  
Sbjct: 4   KQVIAERLAAILPSLEVEAIYN---LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           IV ++      + V   G  ++N +L  + +  ++L+ ++    +YG+  IG+G  V I+
Sbjct: 60  IVEKLDTTG-FEKVVATGP-YVNFFLDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N   P  VGH R  V+GD LA++    GY+  R  ++ D G Q   L ++      
Sbjct: 118 MSSPNIAKPFSVGHLRSTVIGDALANIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGD 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMK 243
           +A    D   P      +Y++      A+      L+    +W   ++D    + +    
Sbjct: 178 KAAVEAD---PISELLKLYVR----INAEAEEKPELDDEARQWFKKLEDGDSEAHELWQW 230

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + L   N  +D      D + G+      + + I  L  +G + E       SK  +
Sbjct: 231 FRDESLVEFNRIYDKLDVTFDSYNGEAFYNDKMDEGIQILEEKGLLQE-------SKGAR 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D++   L              ++K+DG+  Y   D+A    +     F   IY++G +
Sbjct: 284 IVDLESYNL----------PPALIMKTDGATLYITRDMATAMYRKRTYDFVKSIYIVGQE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              + K+L+AV   +    +  ++       + +D    K+S R G+ I           
Sbjct: 334 QINHFKQLKAVLKEMDFDWSD-DMTHVTFGLVTKDKK--KLSTRKGNIILLEPTLDEAIS 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +V+F  L        DFD   +     E    YV
Sbjct: 391 RALTQIEAKNPDLENKEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR +SI R+A           F  +        D     +I H+  +  V+E A  
Sbjct: 450 QYAYARIQSILRKAN----------FVPSAENDYKLADAESWDIIKHIQNFSNVVERAGD 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A Y  +LA  F+ +++H R          +       RL L +A   ++   L
Sbjct: 500 KFDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERDSRLALAYATGLVLKEAL 551

Query: 575 NIIGVESPNEM 585
            ++GV++P +M
Sbjct: 552 RLLGVKAPEKM 562


>gi|116334092|ref|YP_795619.1| arginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269224|sp|Q03QD4|SYR_LACBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116099439|gb|ABJ64588.1| arginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 563

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 133/611 (21%), Positives = 254/611 (41%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   L +         +I  +  +ERP+    G ++      L++ L   P  IA
Sbjct: 2   DYKQIVTAALSDALAGQLTRDEIASK--LERPKTSDKGDMAF-PTFTLAKLLHQAPQQIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++      + V + G  ++N +    +Y  + L +++ +G +YG+N  G+G  V 
Sbjct: 59  QDLAEKLDK-TSFEKVEVVGP-YLNFFFDKGAYSAETLQTVLTAGADYGQNDDGQGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A ++  +GY   ++ ++ D G Q   L  +   W
Sbjct: 117 IDMSSPNIAKPMSMGHLRSTVIGNSIAEILTKNGYHPIKDNHLGDWGTQFGKLITAYKLW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             +  +  +  +    YY   + + V K   D  + E    L   +E+   + + +   A
Sbjct: 177 GNEADVKADPINKLVEYYVRFHKEDVDKPELDDTAREWFRKLENGDEEAHELWQWFR-DA 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++   D  + L +  D F  E  ++      + +++  L  +  + E       S+  Q
Sbjct: 236 SLQEFNDVYEKLGVTFDTFNGEAFYN----DKLEEVVQILKDKNLLVE-------SQGAQ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
             D+ +  L              +LKSDG+  Y   D+A    +         +YV+GS+
Sbjct: 285 VVDLSKYNL----------NPALILKSDGASLYITRDIATALYRDRTYHPAKNLYVVGSE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-------------- 405
            + Y K+L+AV   +    A  ++       +  DG   K+S R+G              
Sbjct: 335 QTYYFKQLKAVLQEMGVPSAD-DLEHIPFGLITVDGK--KLSTRSGRIILLAKVLDDSVK 391

Query: 406 -----------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                      D      V  +VG  ++ F  L  + +  +DF      +   E    YV
Sbjct: 392 LAAEEINEKNPDLANKDEVAQQVGVGAIVFGDLKNERTNNIDFVLADQLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY++AR  SI R+A  +    D +             D      I  LA++P +++ A  
Sbjct: 451 QYSHARAESILRKAGKVTITTDGNQIS----------DPEAWDTIKTLADFPAMVKMACD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ +++H +       +   + +L   RL LV AV++++   L
Sbjct: 501 EFEPSVIAKYAIRLAKTFNKYYAHSK-------ILTEDAEL-PARLALVKAVSTVLKESL 552

Query: 575 NIIGVESPNEM 585
            ++GV++P+EM
Sbjct: 553 RLLGVQAPDEM 563


>gi|318040673|ref|ZP_07972629.1| arginyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 597

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 132/613 (21%), Positives = 228/613 (37%), Gaps = 89/613 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             ++L+  ++    +        D   +        G    N A+ L++PLG  P  IA 
Sbjct: 8   LDNQLRAAMERAFPEAAPPAGGFD-PQLAPASKPEFGDFQANGALPLAKPLGQPPRAIAT 66

Query: 67  LIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +V ++K  P          IAG GFINL L P  L   + + +      G   +  G+ 
Sbjct: 67  AVVEQLKAYPSFAELCLEPQIAGPGFINLTLRPERLAAEVQACLQDQ-RLGVPAVQGGSP 125

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 126 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLK 185

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +AL   D+              +G +L   Y      F +++         V  + 
Sbjct: 186 QVAPEALDTADA------------VDLG-DLVAFYREAKKRFDDDEAFQTTSREEVVKLQ 232

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY-----EGILPPPKS 296
                 LKA  +  D         R +   I D +D  L+ +G  +     EG++   ++
Sbjct: 233 GGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLSERGESFYNPYLEGVVADLEA 285

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFD---- 350
                 D   + +        D    P++  KSDG + Y   DLA  + ++    D    
Sbjct: 286 TGLLVVDDGARCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPDGDGA 345

Query: 351 -NMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +IYV  +  + +   +  VA       +  ++  +   LV+   DG   K+  RAGD 
Sbjct: 346 RRVIYVTDAGQANHFAGVFQVARRAGWVPEDGRLEHVPFGLVQ-GEDGK--KLKTRAGDT 402

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 403 VRLRDLLDEAVERAEADLRRRLEEEGRQEEEAFIQQVATTVGLAAVKYADLSQNRITNYQ 462

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+        D +     +    S  +  E 
Sbjct: 463 FSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGG------DLEGSSVPIDQPLSFHEPQEW 515

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A+     
Sbjct: 516 ALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYD------QVPVLKADEPA-R 568

Query: 557 MMRLQLVHAVASI 569
             RL L    A+ 
Sbjct: 569 ASRLALCRLTANT 581


>gi|296328834|ref|ZP_06871347.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154065|gb|EFG94870.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 569

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 126/593 (21%), Positives = 242/593 (40%), Gaps = 76/593 (12%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE +         ++ + +A
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEVKNNFPYGDVIEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G +Y  + + +  KV I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GEDYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYP- 202
           ++G++++ +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGESVSRIYRFLGYDVVADNHIGDWGTQFGKLIVGYRNWLDKKAYKKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                     +    D K  LF         
Sbjct: 257 GESFYNDMMADVVKELVDK-----------KIAVDDDGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEGEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  ++ 
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVAELN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL+ ++     I  E++    E  L  +L  +P  +  A    +P  +A YLY+L+   
Sbjct: 471 IDLNENIE----IKTENKI---EKSLATYLLAFPISVLKAGETFKPNLIADYLYELSKKL 523

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 524 NSFYNNC-------PILNQDIETLKSRALLIKKTGEVLKEGLELLGIPILNKM 569


>gi|223933231|ref|ZP_03625222.1| arginyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898161|gb|EEF64531.1| arginyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 562

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 235/611 (38%), Gaps = 85/611 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L  I   ++VE       ++E+P+    G ++   A  L++     P  IA  
Sbjct: 4   KQVIAERLAAILPSLEVEAIYN---LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAAD 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           IV ++      + V   G  ++N +L  + +  ++L+ ++    +YG+  IG+G  V I+
Sbjct: 60  IVEKLDTTG-FEKVVATGP-YVNFFLDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N   P  VGH R  V+GD LA++    GY+  R  ++ D G Q   L ++      
Sbjct: 118 MSSPNIAKPFSVGHLRSTVIGDALANIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGD 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMK 243
           +A    D   P      +Y++      A+      L+    +W   ++D    + +    
Sbjct: 178 KAAVEAD---PISELLKLYVR----INAEAEEKPELDDEARQWFKKLEDGDPEAHELWQW 230

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + L   N  +D      D + G+      + + I  L  +G + E       SK  +
Sbjct: 231 FRDESLVEFNRIYDKLDVTFDSYNGEAFYNDKMDEGIQILEEKGLLQE-------SKGAR 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D++   L              ++K+DG+  Y   D+A    +     F   IYV+G +
Sbjct: 284 IVDLESYNL----------PPALIMKTDGATLYITRDMATAMYRKRTYDFVKSIYVVGQE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              + K+L+AV   +    +  ++       + +D    K+S R G+ I           
Sbjct: 334 QINHFKQLKAVLKEMDFDWSD-DMTHVTFGLVTKDKK--KLSTRKGNIILLEPTLDEAIS 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +V+F  L        DFD   +     E    YV
Sbjct: 391 RALTQIEAKNPDLENKEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR +SI R+A           F  +        D     +I H+  +  V+E A  
Sbjct: 450 QYAYARIQSILRKAN----------FVPSAENDYKLADAESWDIIKHIQNFSNVVERAGD 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A Y  +LA  F+ +++H R          +       RL L +    ++   L
Sbjct: 500 KFDPSLIAKYAINLAQAFNKYYAHTRIL--------DESPERDSRLALAYTTGLVLKEAL 551

Query: 575 NIIGVESPNEM 585
            ++GV++P +M
Sbjct: 552 RLLGVKAPEKM 562


>gi|253682317|ref|ZP_04863114.1| arginine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562029|gb|EES91481.1| arginine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 563

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 126/611 (20%), Positives = 240/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    ++++   ++  +IE P     G  +      L++     P  IA
Sbjct: 2   DYKKIIAERIKE---NVELDLNTIEG-LIEIPPKSDMGDYAF-PCFQLAKAFRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E + ++I  +   + V   G  ++N ++   S+++  L+ ++  G  YG +  GKG  V 
Sbjct: 57  EELSSKIN-NEGFEKVVALGP-YLNFFMDKGSFVKDTLNKVIEEGERYGSSEEGKGKNVT 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           I++ S N   P HVGH     +G++L  ++ F GY      ++ D G Q   L  +   W
Sbjct: 115 IDYSSPNIAKPFHVGHLFSTAIGNSLYRMLNFEGYNSIGINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             + AL  +        Y   + +       +         L   E++ + + + +    
Sbjct: 175 VDEDALEKDPIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKLEDGEKEEVELWERFK-NL 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K  +   + L ++ D +  E  ++      +  +I  +  +G + E       S   +
Sbjct: 234 SLKEFKKVYELLGVKFDSYAGESFYN----DKMDSVIKEIDEKGILVE-------SNGAK 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSD 359
              MD + +              ++K DG+  Y   DL A F  K    F   IYV+GSD
Sbjct: 283 VVMMDDENI----------PPCIIVKGDGATIYATRDLAAAFYRKKNYDFHKSIYVVGSD 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K++      +    A     +   +  + D    K+S R G  I L  +++E   
Sbjct: 333 QSLHFKQVFKTIEKMGYNWADDCKHVAFGLVRFADK---KLSTRKGQVIFLEDLLNESVS 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  ++ F  L  K  + + F++ ++     E    YV
Sbjct: 390 KTLEVINEKNPELKNKEEVAKKVGIGAIIFTYLKNKREKDIVFNWNEMLNFEGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +SI R+A ++  +++F                 E  L+  L      +  A  
Sbjct: 449 QYTYARGKSILRRAGEVQGEVNFAALNSQ----------EEFNLVKVLGNLKEEVLVAID 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  Y+ D+A  F+  ++          +   +  +   RL+LV A   +I +GL
Sbjct: 499 KLEPSIVTRYIIDVAKAFNKFYNAHN------IMATEDMAVKNARLKLVEATCQVIKNGL 552

Query: 575 NIIGVESPNEM 585
           +++G+E   EM
Sbjct: 553 DLLGIEVVEEM 563


>gi|118444117|ref|YP_877668.1| arginyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134573|gb|ABK61617.1| arginyl-tRNA synthetase [Clostridium novyi NT]
          Length = 563

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 236/611 (38%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    ++++   ++  +IE P     G  +      L++     P  IA
Sbjct: 2   DYKKIIAERIKE---NVELDVNTIEG-LIEIPPKSDMGDYAF-PCFQLAKTFRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++    L   IL+ ++  G  YG + IG+G  V 
Sbjct: 57  EELSEKINKEG-FEKVTALGP-YLNFFMDKGSLTSDILNKVLEEGDNYGSSKIGEGKNVT 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           I++ S N   P HVGH     +G+ L  ++ F GY      ++ D G Q   L  +   W
Sbjct: 115 IDYSSPNIAKPFHVGHLFSTSIGNALYRMLNFEGYNSIGINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
              +AL  +        Y   + +       +         L   E++ + + + +   +
Sbjct: 175 SDDEALEKDPIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKLEDGEKEEVELWERFKTLS 234

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K        L ++ D +  E  ++      +  +I  +  +G + E       S   +
Sbjct: 235 -LKEFEKVYDTLGVKFDSYAGESFYN----DKMDAVIKEIDDKGLLVE-------SNGAK 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSD 359
              MD   +              ++K DG+  Y   DL A F  K    F   IYV+GSD
Sbjct: 283 VVMMDEDNI----------PPCIIVKGDGATIYATRDLAAAFYRKKNYDFHKSIYVVGSD 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K++      +    A+    +   +  + D    K+S R G  I L  +++E   
Sbjct: 333 QSLHFKQVFKTIEKMGYDWAKDCKHVAFGLVRFADK---KLSTRKGQVIFLEDLLNESVS 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  K  + + F++ ++     E    YV
Sbjct: 390 KTLEVINEKNPELENKEEVAKKVGIGAVIFTYLKNKREKDIVFNWNEMLNFEGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +SI R+A +I  ++++                 E +L+  L      I NA  
Sbjct: 449 QYTYARGKSILRRAGEIGEEVNYAALNSK----------EEFELVKVLGNLQEAILNAID 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  L  Y  ++A  F+  ++          +   +      RL+LV A   +I +GL
Sbjct: 499 KLEPSILTRYTIEVAKAFNKFYNAHN------IMATEDVATKNARLKLVEATCQVIKNGL 552

Query: 575 NIIGVESPNEM 585
           N++G+E   +M
Sbjct: 553 NLLGIEVVEKM 563


>gi|19703841|ref|NP_603403.1| arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|23822190|sp|Q8RG14|SYR_FUSNN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19713995|gb|AAL94702.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 569

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 125/593 (21%), Positives = 241/593 (40%), Gaps = 76/593 (12%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
             K L  + I    +   G    N AMI S+ +G +P  IAE +         ++ + +A
Sbjct: 21  PNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKIAEEVKNNFPYGDVIEKLEVA 80

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++LS  Y+   +  I   G +Y  + + +  KV I+F S N    MH+GH R  
Sbjct: 81  GPGFINIFLSDKYISNSIKKI---GEDYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRST 137

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYP- 202
           ++G++++ +  F GY+V  + +I D G Q   L +    W  ++A   N  +  E  Y  
Sbjct: 138 IIGESISRIYRFLGYDVVADNHIGDWGTQFGKLIVGYRNWLDKKAYKKNAIEELERVYVK 197

Query: 203 --GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                 K    E   +   + +   EE+   + K++  ++ +K      K L++  D + 
Sbjct: 198 FSDEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYY 256

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +++++D                     +    D K  LF         
Sbjct: 257 GESFYNDMMADVVKELVDK-----------KIAVDDDGAKVVFFDEKDNLF--------- 296

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + K DG+Y Y  +D+A  K +      + MIY+  +    + K+   +   +     
Sbjct: 297 PCIVQKKDGAYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIE 356

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
           + ++     +  + DG+   +S R G+ I L  ++DE                       
Sbjct: 357 KYHIWFG--IIRFADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEGEKQN 411

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               VG  SV++  L +     + F++ K+    + N   Y+ Y YAR +SI R+  ++ 
Sbjct: 412 IAEVVGVSSVKYADLSQNKQSDIIFEWDKMLSF-EGNTAPYLLYTYARIQSILRKVAELN 470

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             L+ ++     I  E++    E  L  +L  +P  +  A    +P  +A YLY+L+   
Sbjct: 471 IGLNENIE----IKTENKI---EKSLATYLLAFPISVLKAGETFKPNLIADYLYELSKKL 523

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +++         +   + +    R  L+     ++  GL ++G+   N+M
Sbjct: 524 NSFYNNC-------PILNQDIETLKSRALLIKKTGEVLKEGLELLGIPILNKM 569


>gi|295397707|ref|ZP_06807779.1| arginine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974036|gb|EFG49791.1| arginine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 566

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/615 (23%), Positives = 264/615 (42%), Gaps = 85/615 (13%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D  +++   +K  I+ ++ +E+    + ++E P+   HG ++     I ++ L   P  I
Sbjct: 2   DLKNQVAQVIKSSIETELTLEQ---IQNLLEVPKHEGHGDIAF-PCFIFAKELRKAPQAI 57

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
           A+ I  +I+    VD V   G  +IN +L+ +   + IL+ I  +G  +G   IG G  +
Sbjct: 58  AQEIAPQIEG-EIVDRVEAVGP-YINFFLNQTLVTQAILTEIYEAGNHFGELAIGHGENI 115

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-F 182
            I+  S N   PM +GH R  V+G+ +A++    G+   R  ++ D G Q   L +    
Sbjct: 116 TIDMSSPNIAKPMSMGHLRSTVIGNAIANITTKVGFNPVRINHLGDWGTQFGKLIVGYKK 175

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--A 240
           W  ++A+  N             LK+  +   +  + E L      W   ++D   +  A
Sbjct: 176 WGSEEAVRENPIQ--------ELLKYYVQFHEEAENDESLEDEGRLWFKKLEDGDPEAYA 227

Query: 241 MMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKS 296
           + K  +D+ LK     +DI   E D + G+      +  +ID L  +G +          
Sbjct: 228 LWKWFKDESLKEFQRIYDILGIEFDSYNGEAFYSDKMPAVIDELDDKGLL-------KVD 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
           +     D++   L              + KSDG+  Y   DLA    +     FD  +YV
Sbjct: 281 RGATIVDLEAYNL----------NPALIKKSDGATLYITRDLATAIYRKNTYNFDQSLYV 330

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G++ S + K+L+AV   +    A  ++       + +DG   K+S R G+ + L  V++
Sbjct: 331 VGNEQSNHFKQLKAVLELMGYDWAA-DINHIPFGLITQDGK--KLSTRKGNVVLLEDVLN 387

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         VG  +V F  L        DF+  +V  Q +   
Sbjct: 388 DAIDLAFKQINEKNPDLENKEEVAHQVGVGAVIFHDLKNDRLNSFDFNLEEVV-QFEGET 446

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQYA AR  SI R+        +F+    + +   +       Q++  L  YP ++ 
Sbjct: 447 GPYVQYANARAHSILRKG-------NFEPAKISEMTNFNLDSDEAFQVLKELNRYPDIVA 499

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A    EP  +A YL  L+  F+ +++H R       +   + +L   RL LV+A+  ++
Sbjct: 500 SAYEKYEPSVVAKYLLALSQQFNKYYAHTR-------ILTEDDQL-QSRLALVYALTQVL 551

Query: 571 NSGLNIIGVESPNEM 585
            SGL I+GV++P++M
Sbjct: 552 ESGLAILGVQAPSQM 566


>gi|94676629|ref|YP_588726.1| arginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081491|sp|Q1LTI8|SYR_BAUCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94219779|gb|ABF13938.1| arginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 578

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 131/616 (21%), Positives = 244/616 (39%), Gaps = 69/616 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++    K +            R+ +        G    N  M  ++ LG+ 
Sbjct: 1   MNIHAIISDQIH---KAMLAAGVPPYY---RVQVRPSVKKKFGDYQINGLMATAKQLGVP 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              +A+ +V+ ++++     + IAG GFIN+YL   +L   +++ + S    G +LI   
Sbjct: 55  SYFLAKKVVSFLQLNGIARQIDIAGPGFINIYLDSQWLATKIATAIAS-PRLGISLIELP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ S N    MHVGH R  ++GD  A ++ F G++V R  +I D G     L   
Sbjct: 114 QTIVVDYSSPNIAKEMHVGHIRSTIIGDASARILDFIGHKVIRINHIGDWGTHFGMLIAY 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    QQ   N D ++P       +L  + ++  DKY     +F +E    +VK     +
Sbjct: 174 L----QQVEKNIDPEIP-----LSFLDQLYRQAKDKY-DTDPSFAQEARNCVVKLQCGDS 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               I   L  + I  +  I    ++R + S   + I   ++   +   I+   K+K   
Sbjct: 224 FCLKIWQKLVKITINENQKI----YNRLNISLSHENIMGESKYNNMLPNIIADLKAKGLA 279

Query: 301 KCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +     ++F        G+ +   + K DG+Y Y   D+A  K +YE+   D +IY +
Sbjct: 280 -VESAGATVIFLNEFQDKQGNPLGVIIQKKDGAYLYTTTDIACIKYRYEQLKADRIIYYV 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            S    ++K++  +          + +       ++ D        R G  I L  ++DE
Sbjct: 339 DSRQHQHLKQIWTIVRKAGYIPQTMQLDHHMFGMIF-DKEGKPFKTRVGVNIKLNDLLDE 397

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      +   ++++  L +  +    F++  +    + N
Sbjct: 398 ALKRARCLILSKNMDVDPVELEHLAQVISISAIKYAELSKNRTTDYIFNWDDMLSF-EGN 456

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YAY R  SI +++     + +        I  E E    E  L V L +Y   I
Sbjct: 457 TAPYILYAYTRIASILKRS-----NYNKQQILTGSILLEKE---HEHLLAVRLLQYHETI 508

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                   P+ L  YLY+LA  F   + H         + AN+      RLQL    +  
Sbjct: 509 TTVAHDGRPHILCGYLYNLAVRFSSFYEHC------SIINANSDIQRKSRLQLALLTSKT 562

Query: 570 INSGLNIIGVESPNEM 585
           +  GL+++G+E+ ++M
Sbjct: 563 LQHGLSLLGIETVDKM 578


>gi|167766874|ref|ZP_02438927.1| hypothetical protein CLOSS21_01391 [Clostridium sp. SS2/1]
 gi|317499285|ref|ZP_07957558.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711422|gb|EDS22001.1| hypothetical protein CLOSS21_01391 [Clostridium sp. SS2/1]
 gi|291558413|emb|CBL37213.1| arginyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316893454|gb|EFV15663.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 561

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 130/609 (21%), Positives = 245/609 (40%), Gaps = 78/609 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ + L +   +  ++K+ +D I +E P     G  +      L++     P  IA 
Sbjct: 1   MRNKVIDLLDQTIEE--LDKEKIDGI-LEIPPKDDMGDFAFP-CFQLAKVFRKAPNMIAT 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I  +I    DV  V   G  ++N +L+     K + + V     YG   IGKG  V I+
Sbjct: 57  EIAEKIPASEDVSKVEAMGP-YVNFFLNKENYVKEVLAKV--NGTYGAQEIGKGKTVCID 113

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           + S N     HVGH R  ++G++L  +    GY+V R  ++ D G Q   L ++   W  
Sbjct: 114 YSSPNIAKNFHVGHLRTTIIGNSLYHIFDKLGYKVERINHLGDWGTQFGKLIVAYKKWGS 173

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++A+           Y   + +    +  +  + E    +   +E+ L I + +   +M+
Sbjct: 174 KEAVEEKGIPELLRIYVKFHEEAEKDDTLNDQAREWFAKMEQGDEEALSIWEWFKDISMV 233

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +   K LN+  D +  E  +          +++ L  +  + E       S+     
Sbjct: 234 EY-KRIYKMLNMDFDHYTGESFY----RDKTAAVVEELKEKNLLKE-------SEGAMIV 281

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHS 361
           D+D            D     ++K DGS  Y   DLA  F  K E  FD  IYV G +  
Sbjct: 282 DLDEY----------DMAPCLVMKKDGSSIYATRDLAAIFYRKKEYNFDKCIYVTGLEQK 331

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            +  ++  V   +  + A+ N++      +  +G   K+S R+G+ +    ++ E     
Sbjct: 332 LHFAQVFKVVELMGYEWAKENLIHVPYGLVSLEGG--KLSTRSGNIVYAEDILKESVSKI 389

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               VG  ++ F  L+ +  + + F + K+     E    YVQY
Sbjct: 390 REIIAEKNPDLKDKEDVAQKVGIGAIIFNDLYNQRIKDVTFTWEKIHSFDGE-TGPYVQY 448

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            YAR  S+ R+           +     I      D + + L+  +  +P VI+ A    
Sbjct: 449 TYARAASVLRKTG---------ITEVGEIDPSLVTDETSVALLKEIERFPEVIKVAADRL 499

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  ++ Y+  +A  F+  +   + N         ++KL   R+++V     +I  GL++
Sbjct: 500 EPSVISRYVMGVAQSFNRFYHENQCN-------VEDQKLKEARVKIVILAKQVIKDGLDL 552

Query: 577 IGVESPNEM 585
           +G++ P +M
Sbjct: 553 LGIQCPEQM 561


>gi|322386535|ref|ZP_08060162.1| arginine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269454|gb|EFX52387.1| arginine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 562

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 130/587 (22%), Positives = 235/587 (40%), Gaps = 84/587 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E+P+    G ++   A  L++     P  IA  I  +I      + V   G  ++N +
Sbjct: 26  LLEQPKSSDLGDIAFP-AFSLAKVERKAPQAIAADIAEKIDPS-HFEKVVATGP-YVNFF 82

Query: 93  LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L+ + +  +++  ++  G +YG+   G+G  + I+  S N   P  VGH R  V+GD L+
Sbjct: 83  LNKAKISDQVIKEVIKEGADYGQQNEGQGGNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++    GY   +  ++ D G Q   L ++   W  ++A+  N  D     Y  +      
Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGNKEAVEANPIDELLQLYVRI------ 196

Query: 211 KELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              A+  +   L+     W   ++D    + +       + L   N  +++   E D   
Sbjct: 197 --NAEIENDPALDEEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELLGVEFDSLN 254

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      + + +  L  +G + E       SK     D+D   L              +
Sbjct: 255 GEAFYNDKMDEAVKILEDKGLLKE-------SKGASIVDLDDVNL----------PPAMI 297

Query: 325 LKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            KSDG+  Y   D+A    +     F   +YV+G + S + ++L+AV   +    +  ++
Sbjct: 298 KKSDGATLYITRDIATAMYRARTYNFVKNVYVVGQEQSNHFRQLKAVLKKMGFDWSD-DM 356

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFI-------------------------TLRHVVDEVG 418
           +  +   + ++    K+S R G+ I                             V   VG
Sbjct: 357 IHVDFGLVTKN--RQKLSTRKGNIILLEPTLQEAISRAKAQIEEKNPNLENKEAVAHAVG 414

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V+F  L        DFD   +     E    YVQYAYAR +SI R+A D  P LD +
Sbjct: 415 VGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TGPYVQYAYARIQSILRKA-DFKPSLDVN 472

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                     +  D    ++I  L ++ RV++ A    EP  +A Y   LA  F+ +++H
Sbjct: 473 Y---------NLNDAESWEIIKLLQDFARVVKRAADNFEPSLIAKYAISLAQAFNKYYAH 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R          +       RL L +  A ++   L ++GVE+P +M
Sbjct: 524 TRIL--------DESPERDSRLALSYTTAVVLKEALRMLGVEAPEKM 562


>gi|319940118|ref|ZP_08014472.1| arginine-tRNA ligase [Streptococcus anginosus 1_2_62CV]
 gi|319810832|gb|EFW07159.1| arginine-tRNA ligase [Streptococcus anginosus 1_2_62CV]
          Length = 562

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 132/613 (21%), Positives = 239/613 (38%), Gaps = 91/613 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S L   +  +D    +        ++E+P+    G ++   A  L++     P  IA 
Sbjct: 7   IASELAKVIDSLDQDAILN-------LLEQPKSSELGDIAFP-AFSLAKVERKAPQAIAA 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I  +I    + + V   G  ++N +L  S +  +++  IV  G +YG+   G G  + I
Sbjct: 59  DIAEKID-STNFEKVVATGP-YVNFFLDKSKISAQVIKEIVKEGNDYGQQDEGHGENITI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DLSSPNIAKPFSVGHLRSTVIGDALSNIFRKLGYNTIKINHLGDWGKQFGLLMVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
            ++A+  N    P      +Y++      A+  +   L+     W   ++D    + +  
Sbjct: 177 SKEAVEAN----PIDELLKLYVR----INAEIETDPELDDEGRLWFKKLEDGDPEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  N  + +   E D   G+      + + I  L  +G + E       SK 
Sbjct: 229 QWFRDESLKEFNRIYKLLGVEFDSLAGEAFYNDKMDEGIKILEEKGLLEE-------SKG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
               ++D   L              + KSDG+  Y   D+A    +     F   IY +G
Sbjct: 282 ASIVNLDDVNL----------PPAMIKKSDGATLYITRDIATAMYRARTYNFVKNIYAVG 331

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
            + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I         
Sbjct: 332 QEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLQEA 388

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +V+F  L        DFD   +     E    
Sbjct: 389 ISRAQSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TGP 447

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ A
Sbjct: 448 YIQYAYARIQSILRKAD----------FKPSAEATYSLDDAESWEIIKLLQDFARVVKRA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P  +A Y   LA  F+  ++H R          +       RL L +A A ++  
Sbjct: 498 ADNYDPSLIAKYAISLAQAFNKFYAHTRIL--------DESPERDSRLALSYATAVVLKE 549

Query: 573 GLNIIGVESPNEM 585
            L ++GV++P +M
Sbjct: 550 SLRLLGVDAPEKM 562


>gi|296271270|ref|YP_003653902.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296094057|gb|ADG90009.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 575

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 124/615 (20%), Positives = 229/615 (37%), Gaps = 85/615 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R++  L         E+  L        R         N A+ L++ L   P  +A+
Sbjct: 10  LTERVQQALGTAFGPEYAEEDPLI-------RSSQFADYQANIALSLAKRLRRAPRDVAQ 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +          ++G GFIN+ LS  ++ +     ++     G   +     V I+
Sbjct: 63  DLLGALDQTGIT--AEVSGPGFINITLSDEWIAEQA-ERLLQDERLGVPKVT-PQTVVID 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           + + N    MHVGH R  +VGDTLA      G  V R+ ++ D G     L   +     
Sbjct: 119 YSAPNAAKEMHVGHLRTTIVGDTLARTHEHLGNRVIRQNHLGDWGTPFGMLIEHLLDVGE 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMM 242
           ++AL    +     +Y     K       ++ S     LL   + + L +  ++ ++   
Sbjct: 179 EEALRRLAAGEGNAFYQEARKKFDTDPEFEERSRRRVPLLQGGDPESLRLWGEF-IEYTK 237

Query: 243 KIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +        L +    +    E  ++      + D+ D L + G                
Sbjct: 238 RYFNKVYAMLGVTLTDEHIAGESMYNPM----LADVCDELEKAGIA-------------- 279

Query: 301 KCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
               D    +F     G D   +   + K DG Y Y   DLA  + +  +   D ++YV+
Sbjct: 280 -KISDGALCVFPPGFTGRDGAPLPLIIRKRDGGYGYATTDLAAIRYRIRDLKADRILYVV 338

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVD 415
           G+  S + + + A A         I     ++   L  DG   +   R+G+ + L  +++
Sbjct: 339 GATQSLHFQMVFATARMAGWLTDDIRAEHVQIGSVLGSDGKMFR--TRSGESVKLTDLLN 396

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         VG  +V++  L   +     FDF ++   +  N 
Sbjct: 397 EAIVRADAVIADRGYEPEVREQIARKVGMGAVKYADLSVSHDSEYVFDFDRMLALT-GNT 455

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYA AR RSIFR            + P +V         +E  L + L ++  V++
Sbjct: 456 GPYLQYATARIRSIFR---------TGSIDPGSVTGPIRLGHPTERALALQLLKFGSVVQ 506

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP++L  YL++LA  F   + +         ++A + ++   RL L      I+
Sbjct: 507 AVADLSEPHRLCGYLFELAQAFTAFYENC------PVLKAEDEEVRRSRLALSALTLRIL 560

Query: 571 NSGLNIIGVESPNEM 585
             GL+++G++ P  M
Sbjct: 561 LQGLDLLGIDVPERM 575


>gi|310778226|ref|YP_003966559.1| arginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747549|gb|ADO82211.1| arginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 570

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 127/611 (20%), Positives = 254/611 (41%), Gaps = 76/611 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L    +E    I  E++I   I IE   +   G   TN AM+ ++ L  +P  IAE
Sbjct: 4   IEKELGAIFEETIKNIYGEQEIKP-IDIEAASNEKFGDFQTNFAMVNAKVLRSNPRAIAE 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  +  +  ++ + +AG GFIN++L   YL   +  I     +Y  + +     V I+
Sbjct: 63  NVVNNLVDNNVIEKIEVAGPGFINIFLKEEYLGDRVRKISTE--KYDLSFLDTHGDVIID 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           + S N    MH+GH R  ++GD++  +  + GY+V  + +I D G Q   L +    W  
Sbjct: 121 YSSPNIAKRMHIGHLRSTIIGDSIKRIYRYLGYKVVADNHIGDWGTQFGKLIIGYRNWLD 180

Query: 186 QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMM 242
           ++A   N  +  E  Y           EL D+   EL  L+  +E+   + +++ ++  +
Sbjct: 181 REAYKANPIEELERVYVEFSKNSEENTELEDQAREELRKLHEGDEENYSLWQEF-IKVSL 239

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                    L +  D +  E  +H   P+ + +++D    +                   
Sbjct: 240 DEYNKVYGRLGVDFDTYYGESFYHDMMPAVVEELLDKNIAK------------------- 280

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
           + D   ++F            + K DG++ Y  +D+A  K + E    + +IYV      
Sbjct: 281 EDDGANVVFFEEKDKLH-PCIVQKKDGAFLYATSDIATVKFRKENYDVNQIIYVTDERQQ 339

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + ++   +   +  +  + N +   ++R          S R G+ I L H++DE     
Sbjct: 340 DHFRQFFKITDMLGWE-VKKNHVWFGIMRFAEG----IFSSRKGNVIRLEHLLDEGKKKA 394

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  ++++  L +     + F++ K+    + N   Y+
Sbjct: 395 LEVVEEKNPTLSAEEKANISEVVGIGAIKYADLSQNRQSPVIFEWDKILSF-EGNTAPYL 453

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY+YAR +SI R+  +    L  D     +I +ES    +E  L+++++ +P+++  A  
Sbjct: 454 QYSYARIQSILRKGAENSKVLKED---SKIILEES----AERSLVLYMSLFPKMVMKAAE 506

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           +  P  +  YL++L+  F+  ++          +   +  L   RL +    A ++  GL
Sbjct: 507 SFRPNLVTDYLFELSRRFNTFYNSC------PILNQEDEIL-YSRLLIADRTAKVLKEGL 559

Query: 575 NIIGVESPNEM 585
           +++G+ + + M
Sbjct: 560 DLLGIGTVDRM 570


>gi|302875611|ref|YP_003844244.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690142|ref|ZP_07632588.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578468|gb|ADL52480.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 562

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 123/587 (20%), Positives = 224/587 (38%), Gaps = 83/587 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E P     G  +      L++ L   P  IA  I  +I  +   + V   G  ++N +
Sbjct: 25  LLEVPPKPEMGDYAF-PCFQLAKTLRKAPNAIAVEIAEKINKEG-FEKVESLGP-YVNFF 81

Query: 93  LSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           L      K +   V+S G  YG +  G+G  + I++ S N   P HVGH    V+G++L 
Sbjct: 82  LDKGVFTKNIVEKVLSEGDSYGSSDFGQGKNICIDYSSPNIAKPFHVGHLFTTVIGNSLY 141

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
            +  F GY      ++ D G Q   L  +   W  ++ L  +    P      +Y+K   
Sbjct: 142 KMFNFVGYNSIGINHLGDWGTQFGKLIYAYKHWSNEEDLEKD----PIKELLRIYVKFHD 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               +    E L      +   ++D    + +   +     L+     +D+   + D + 
Sbjct: 198 ----EAEKDETLEDEGRAYFKKLEDGDKEATELWQRFKDVSLREFKKVYDLLGVDFDSYA 253

Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           G+      +  I++ L  +  + E       S   Q  +++   +              +
Sbjct: 254 GESFYNDKMDVIVEELKNKKLLVE-------SNGAQVVNLEEYNM----------PPCIV 296

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           LKSDG+  Y   DLA    +     F+  IYV+G D S + K++  V   +    A+   
Sbjct: 297 LKSDGATIYATRDLAAANYRKNTYDFEKCIYVVGKDQSLHFKQIFKVLELMGNDWAKECH 356

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418
            +   +  + D    K+S R GD I L  ++ E                         VG
Sbjct: 357 HVPFGLVRFADK---KLSTRKGDVIFLDELLAESVAKTLEIINEKNPNLENKEDVSKKVG 413

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++ F  L     + + FD+ ++     E    YVQY YAR +SI R+  +   + D+ 
Sbjct: 414 IGAMIFTYLKNSREKDIVFDWKEMLSFEGE-TGPYVQYTYARAKSILRRIGEGSGECDYT 472

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L               E +L   L      I  A    EP  +  Y+ +++  F+  ++ 
Sbjct: 473 LLSSK----------EEFELAKSLEGLQAAIFQAIEKLEPSIVTRYVIEVSKAFNKFYNA 522

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       +      +   RL+LV A   +I + LN++G+++  +M
Sbjct: 523 CQ-------ITTAEDSVKNARLKLVSATTVVIKNALNLLGIDAVEQM 562


>gi|152993784|ref|YP_001359505.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425645|dbj|BAF73148.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 565

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 136/614 (22%), Positives = 239/614 (38%), Gaps = 88/614 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   +K    K  ++    + I +        G    N AM LS+ L  +P  IA 
Sbjct: 3   LKEEVNKVIKAAFDKAGIDA---EPISVSEATKPEFGDYQFNGAMALSKKLRKNPREIAS 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +     V    IAG GFINL+L+ +++ +       +    G        KV ++
Sbjct: 60  EIMEHLDFSGIVAKAEIAGPGFINLWLNDTWVAQ-ACEKARADERLGIEKTSNPIKVVVD 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N    MHVGH R  ++GDTLA+L+ F G EV R+ +I D G Q   L   +  R +
Sbjct: 119 YSGPNMAKQMHVGHLRSTIIGDTLANLLEFLGDEVIRQNHIGDWGTQFGMLIAYLEERGE 178

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                +  DL + Y          +  ADK    ++       +    ++ +    K I 
Sbjct: 179 DG-SGSLKDLEQFYKDAKKRFDEDEAFADKAREYVVK------IQSGDEHCLNLWQKFID 231

Query: 247 DDLKALNIQHDIF--------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             L      +D          +  + F+  D   + +++ +LA++G + E          
Sbjct: 232 ISLGHCEEVYDKLCVRLTREDVKAESFYNED---LPEVVADLAKEGRLRES--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG 357
                 +  Q +F      D++   + K DG Y Y   DLA  + +    G   + YV+ 
Sbjct: 280 ------EGAQCVFFEE---DEIPVIVQKGDGGYLYATTDLAALRYRANILGAKRISYVVD 330

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE 416
           +    + K++  VA         + +       +  + G P K   R G  + L  ++DE
Sbjct: 331 ARQGEHFKQIFKVAKMSGFVPKDVRLEHVAFGTMMDKGGKPFK--TRDGGTVKLIDLLDE 388

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     +G  +V++  L         F++ K+    + N 
Sbjct: 389 AVVKAKAAIKEKDDYSEEEVEKLAKTIGIGAVKYADLSINRESNYIFNWDKMLSF-EGNT 447

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAYAR +SIFR+      D+  D+   + +         E +L V L  +  ++E
Sbjct: 448 SLYMQYAYARIQSIFRRYG---GDIKGDIVITDAL---------EHRLGVMLLRFEEILE 495

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P ++  YLY+L ++F   +    +NP L+  +  +      RL L    A  I
Sbjct: 496 RAAEDAAPNQITTYLYELVTLFMRFYE---QNPILK--EGVDEATKQSRLALADMTAKTI 550

Query: 571 NSGLNIIGVESPNE 584
             GL+I+G+E  ++
Sbjct: 551 KQGLDILGIEVVDK 564


>gi|209560234|ref|YP_002286706.1| arginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|229558814|sp|B5XJ77|SYR_STRPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|209541435|gb|ACI62011.1| Arginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 563

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 127/613 (20%), Positives = 246/613 (40%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + + + ++  +++ +       ++E P++   G L+   A  L++ L   P  IA
Sbjct: 2   DTKTLIASEIAKVVPELEQDAIFN---LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L       ++L  ++ +G +Y +   G+G  V 
Sbjct: 58  SELAEQIDES-QFEKVVAVGP-YINFFLDKVKISSQVLEQVITAGSDYAQQDEGQGRNVA 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   P  +GH R  V+GD+LA++ A  GY+  +  ++ D G Q   L ++    
Sbjct: 116 IDMSSPNIAKPFSIGHLRSTVIGDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKW 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A        P      +Y++      A+      ++    +W   ++D    + +  
Sbjct: 176 GDEAAVQ---AHPIDELLKLYVR----INAEAEIDPTVDEEAREWFRKLEDGDKEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + L   N  +D      D + G+      + +++  L  +  + E       SK 
Sbjct: 229 QWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLALLEAKNLLVE-------SKG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMG 357
            Q   +++          G      + KSDG+  +    LA     K    F   +YV+G
Sbjct: 282 AQVVTLEK---------YGIAPPPLIKKSDGATLHITRALAPALYRKRTYDFAKSVYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ + + K+L+AV   +    +  ++       + + G   K+S R G+ I         
Sbjct: 333 NEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEA 389

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +++F  L        DFD   +     E    
Sbjct: 390 INRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYA+AR +SI R+A           F  +     S  D    ++I  + ++PR+I+  
Sbjct: 449 YVQYAHARIQSILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRT 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +  +LA  F+ +++H R          ++      RL L +A A+++  
Sbjct: 499 SDNFEPSIMAKFAINLAQSFNKYYAHTRIL--------DDNSERDNRLVLCYATATVLKE 550

Query: 573 GLNIIGVESPNEM 585
            L ++GV++PNEM
Sbjct: 551 ALRLLGVDAPNEM 563


>gi|123967742|ref|YP_001008600.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123197852|gb|ABM69493.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 604

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 131/632 (20%), Positives = 227/632 (35%), Gaps = 84/632 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L+  D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLENNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKIL---SSIVVSGIEYGRN 115
            I+   +  +  +        S+ IAG GFIN+ L    L   +        +GI   R 
Sbjct: 66  DISNDFINLLNKNKRISKLCKSLEIAGPGFINIKLKDEVLINEIKSNIQCNRAGIPLIRK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            +  G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D G Q
Sbjct: 126 DLESGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L   +   Y   L        SDL E Y           E   +   E++   +   
Sbjct: 186 FGMLITQLKDLYSNDLEEIGKIKISDLVEFYKESKKRFDNESEFQKRSREEVVKL-QSGD 244

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +  +K  + + +    R +   +     I I E      +P  ++ +ID+L  +  + E 
Sbjct: 245 IKSIK--AWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNP-FLKSVIDDLNLEKILVE- 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-- 347
                  +  +   +D       +   G  +   + K DG + Y   DLA  + ++ +  
Sbjct: 301 ------DQGAKCVFLDG-----MTNKEGKPLPLIIQKKDGGFNYATTDLAAIRYRFNKPP 349

Query: 348 ---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                  +IYV     + +   +  VA           V       L +     K+  R 
Sbjct: 350 NGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPENCQVDHVPFG-LVQGIDGKKLKTRE 408

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           G  I L+ +++E                               +G  +V++  L +    
Sbjct: 409 GKTIRLKDLLNEAVRRAKEDLLKRLEDEDRYETEEFIANTSRIIGLGAVKYADLSQNRIT 468

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+      N   Y+ Y   R   I R+   ++   DF                
Sbjct: 469 NYQFSFDKMLSL-NGNTAPYLLYTLVRILGIKRKNNFVYDSKDFQYVNYE--------HK 519

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +LI  L ++  VI +      P +L  YL++L   F+  +    + P L+      +
Sbjct: 520 SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYD---QVPILK----EEK 572

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + RL L    A  +   L I+G+E+   M
Sbjct: 573 NIKISRLNLCDLTAKTLKLSLEILGIETLERM 604


>gi|78778575|ref|YP_396687.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|109895016|sp|Q31CZ4|SYR_PROM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78712074|gb|ABB49251.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 604

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 125/632 (19%), Positives = 226/632 (35%), Gaps = 84/632 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D + + +   L + ++ +      G    N  + LS+     P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKRGEFDN--LRKNLVTQSSKEEFGDYQCNVCLCLSKIYKKKPR 65

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKIL---SSIVVSGIEYGRN 115
            I+E  V  +  +        S+ IAG GFIN+ L    L   +        +GI   + 
Sbjct: 66  EISEDFVYLLNKNKSISKLCKSLEIAGPGFINIKLKDEVLINEIKSNIQCPRAGIPLIKK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            +  G   KV ++F S N    MHVGH R  ++GD+++ +    GY+V R  ++ D G Q
Sbjct: 126 DLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYQVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L   +   Y   L        SDL E Y           E   +   E++       
Sbjct: 186 FGMLITQLKDLYSNDLEEIGKIKISDLVEFYKASKKRFDNESEFQKRSREEVVKLQSGDS 245

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I    + + +    R +   +     I I E      +P  ++ +I++L  +  + E 
Sbjct: 246 KSI---QAWKLLCDQSRKEFDEIYKNLKIKIKERGESFYNP-FLKSVIEDLKFKKILIE- 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-- 347
                  +  +   +D       +   G  +   + K DG + Y   DLA  + ++ +  
Sbjct: 301 ------DQGAKCVFLDG-----MTNKEGKPLPLIVQKKDGGFNYATTDLAAIRYRFNKAP 349

Query: 348 ---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                  +IYV     + +   +  VA        +  V       L +     K+  R 
Sbjct: 350 NGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPDKCQVDHVPFG-LVQGIDGKKLKTRE 408

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           G+ I L+ +++E                               +G  +V++  L +    
Sbjct: 409 GETIRLKDLLNEAVRRAKEDLLKRLEDEDRYETEEFIANTSRIIGLGAVKYADLSQNRIT 468

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+      N   Y+ Y   R   I R+   ++   DF                
Sbjct: 469 NYQFSFDKMLSL-NGNTAPYLLYTLVRISGIKRKNDFVYDSEDFQYINYE--------HK 519

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +LI  L ++  VI +      P +L  YL++L   F+  +    + P L+      +
Sbjct: 520 SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYD---QVPILK----EEK 572

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + RL L    A  +   L ++G+E+   M
Sbjct: 573 NIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|27379868|ref|NP_771397.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353021|dbj|BAC50022.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 416

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 174/358 (48%), Positives = 239/358 (66%), Gaps = 4/358 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           ++LFAD  +R+    + +       + I   R+V+E PRD +HG ++TNAAM+L++    
Sbjct: 8   LHLFADVLARVHAACRALAADASWPEGIDFSRVVVEPPRDASHGDMATNAAMVLAKEAKA 67

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +AE I  R++ D  +  V +AG GFINL L P+   + L +++  G +YGR  +  
Sbjct: 68  KPRDLAEQIAERLRADALIAKVDVAGPGFINLTLKPAAWAEALRTVLREGADYGR--VRG 125

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G+KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F G++VTREYYINDAGAQ++ LA 
Sbjct: 126 GSKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLQFGGHDVTREYYINDAGAQVDVLAR 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S F RY++AL  +   +PEG YPG YLK VG+ LA ++  +L    E +WLP V+  ++ 
Sbjct: 186 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGQALAKEHGDKLRAMTEAEWLPTVRAKAIA 245

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            MM  I+DDL ALNI+HD+F SE        + + + ID L  +G +YEG LPPPK    
Sbjct: 246 MMMDEIKDDLAALNIRHDVFFSERSLIESGNNKVAETIDFLKAKGDIYEGRLPPPKGAPV 305

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           +  + DR+QLLF++T  GDDVDRPL+KSD SYTYFA+D+AY K K++RGF  MI V G
Sbjct: 306 EDWE-DREQLLFKATAYGDDVDRPLIKSDNSYTYFASDIAYHKNKFDRGFAEMIDVWG 362


>gi|116053199|ref|YP_793520.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254244067|ref|ZP_04937389.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|122256786|sp|Q02EW6|SYR_PSEAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115588420|gb|ABJ14435.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197445|gb|EAZ61508.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 587

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 121/604 (20%), Positives = 223/604 (36%), Gaps = 78/604 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     +   +   I +E  +D +HG  ++N AM+L++P G+ P  +A 
Sbjct: 5   IRQLIQQALDQLTADGTLPAGLTPDIQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  I     +  V IAG GF+N +    +L   L   +      G    G   +V I+
Sbjct: 65  RLVEAIPAHEQLAKVEIAGPGFLNFFQDHVWLAASLDRALAD-ERLGVRKAGPAQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L   +  +  
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDTVIRQNHVGDWGTQFGMLLAYLEEQPV 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A      DL   Y           E AD+    ++     +   L +   ++  ++   
Sbjct: 184 DA-EAELHDLEVFYRAAKKRFDESPEFADRARELVVKLQAGDPDCLRLWTRFNEISLSHC 242

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +   + E  ++      +  ++ +L  +G + E              
Sbjct: 243 QKV-YDRLGVKLSMADVMGESAYN----DDLAQVVADLTAKGLLTE-------DNGALCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            ++     FR    G+ +   + K+ G Y Y   DLA  + ++     D ++Y +    +
Sbjct: 291 FLEE----FR-NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRHNVLHADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +++  VA       A + +       +   DG P K   R G  + L  +++E    
Sbjct: 346 LHFQQVFEVARRAGFVPAGMELEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLEEAESR 403

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG DSV++  L +  +    F+F  +   
Sbjct: 404 AYALVKERNEQRAERGEEPFDEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNFELMLSF 463

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YA  R  S+FR+       L   +               EL L   LA++
Sbjct: 464 -EGNTAPYLLYACTRVASVFRKLGQGREQLGGKIV---------LEQPQELALAAQLAQF 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             +I N  +   P+ L  YLY+LA +F   + H         + A +      RL+L   
Sbjct: 514 GDLINNVALKGVPHLLCAYLYELAGLFSSFYEHC------PILTAEDPAQKDSRLRLAAL 567

Query: 566 VASI 569
               
Sbjct: 568 TGRT 571


>gi|223997646|ref|XP_002288496.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975604|gb|EED93932.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 602

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 134/625 (21%), Positives = 236/625 (37%), Gaps = 81/625 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           +  + E          I D  ++        G    NAAM L++  GL+P   A  IV  
Sbjct: 6   RTTIIEAAASSAKPFTIGDS-MVTPATKPEFGDYQCNAAMSLAKSAGLNPRECASKIVDG 64

Query: 72  IKI----DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR---NLIGKGTKVN 124
           +K     D  ++   IAG GFINL     YL      + +   + GR    +     K+ 
Sbjct: 65  LKAIEGFDTIMEEPEIAGPGFINLRFKDGYLAGAAGKMAMDAEDGGRLAIPVTKNKQKII 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           ++F S N    MHVGH R  ++GDTL++L+ FSG++V R  ++ D G Q   L   +   
Sbjct: 125 VDFSSPNIAKEMHVGHLRSTIIGDTLSNLLTFSGHDVLRLNHVGDWGTQFGMLVEHLRDE 184

Query: 185 YQQALYNNDS------DLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           + +AL    S      DL   Y        V +E   +    ++     +E+ L   +  
Sbjct: 185 FPEALDKESSKNVDLGDLVMLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESL 244

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              + ++  +     L+I+      E  ++         +I++L  QG   E       S
Sbjct: 245 CAASRVEYQKI-YDLLSIKGLNERGESFYNPYLVG----VIEDLESQGLAVE-------S 292

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-------RGF 349
           +      +D       +   G  +   + KSDG + Y   DLA  + + +          
Sbjct: 293 EGATAVFLDGY-----TNRDGSPLPMLVRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKA 347

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D ++YV  +  S + + + A A         I++       L +     K + R+GD + 
Sbjct: 348 DRVLYVTDAGQSQHFEMVFAAAKKAGFIAEPISLEHVPFG-LVQGEDGKKFATRSGDTVK 406

Query: 410 LRHVVDE------------------------------VGSDSVRFMMLWRKNSELLDFDF 439
           L+ ++DE                              VG  +V++  L         F +
Sbjct: 407 LKDLLDEAVKIAGEDMKSRMDNPDQELSEALNDVAKTVGIGAVKYADLSMNRESNYKFSY 466

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++      N   Y+ YAYAR   I R+A     D   +    + I        +E QL+
Sbjct: 467 GRMLSL-NGNTAPYMLYAYARICGIVRKATGQSEDTKVEWPEASDI---IISHDAEKQLV 522

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            +L + P ++        P +L  YL++ +  F+  + +   N       A   +L   R
Sbjct: 523 RNLVKLPDILSEVETDLYPNRLCDYLFETSQKFNQFYENCSVN------NAETPELKASR 576

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           L L    A+ I   +N++G++   +
Sbjct: 577 LSLCTVSAATIRLLMNLLGIQVVEK 601


>gi|320102292|ref|YP_004177883.1| arginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749574|gb|ADV61334.1| arginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 692

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/656 (23%), Positives = 248/656 (37%), Gaps = 94/656 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + +      R +  + E      V+ +   R + E   D   G    N  M  ++  G++
Sbjct: 58  LNVLTLLRERFRRAVPE-----GVDPESFTRAIRESGSDK-FGDYQANGCMAAAKTAGVN 111

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +  R+ + P  +   +AG GF+N+ L+  +L + L   +VSG     +  G  
Sbjct: 112 PRDLAAAVAQRVDLAPLANPPEVAGPGFLNITLTTPFLAETLKHRLVSG-RLLDDCPGTP 170

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + ++F S N   PMHVGH R  V+GD LA +    G++V R+ ++ D GAQ   +   
Sbjct: 171 QTIIVDFSSPNVAKPMHVGHLRSTVIGDALARIFEALGHKVWRDNHLGDWGAQFGMILWG 230

Query: 181 V-FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPE----EKWLPIVK 234
               R   A   N   +L   Y     L    +EL +K    L    E    E    ++K
Sbjct: 231 YRHLRDPIAYAKNPVRELARLYRKVNDLSKPAEELGEKLDKVLKMLDEGRRDEAARLVLK 290

Query: 235 DYS------VQAMMKIIRDDLKALN-----IQHDIFISEDD------FHRGDPS------ 271
            +        + + K+ +     L      + H   ++E         H GDP       
Sbjct: 291 LFDGRETPTPEEVAKLSKRIASRLRVLQEKVAHARAVTEATRRETAKLHAGDPENRRLWN 350

Query: 272 --------PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM------VG 317
                    +  +   L  +     G             D+  K L   S         G
Sbjct: 351 EFMPHCLRALEAVYRRLDIRFDTQLGESFFDPMLADVVADLQAKGLAVESEGALAVFNEG 410

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
            +    + K DG+Y Y   DLA  K + E    D ++YV+    S + K+L A A     
Sbjct: 411 ANAPFLIRKRDGAYNYATTDLATIKHRVETYHPDRVLYVVDHRQSDHFKQLFATARRWGY 470

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
               +  +    + L RDG P K   RAGD + L  ++DE                    
Sbjct: 471 DTVDLVHVSFGTI-LGRDGRPYK--TRAGDVVGLESLLDEAVAQARKVVEENSPDLKPAE 527

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  +V++  L +  +    FD  K+      N   Y+QYAYAR RSIFR+  
Sbjct: 528 KAKVARIVGLGAVKYADLSQNRTSDYKFDLDKMT-AMNGNTATYLQYAYARNRSIFRKGG 586

Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                +D   F +     E  F+  +E  L V L  YP  +E A    +P  L  YL+ L
Sbjct: 587 -----VDPAKFAKKAGSIELIFNHPAERGLAVKLVRYPEAVELAAAELKPNILTDYLFQL 641

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A+ +   +           ++A + +    RL L    A  + +GL ++G+ +   
Sbjct: 642 ATTYSSFFEEC------PVLKAESDERRDSRLALCELTARTLKAGLGLLGIGTAER 691


>gi|300855348|ref|YP_003780332.1| arginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300435463|gb|ADK15230.1| arginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 564

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 135/614 (21%), Positives = 246/614 (40%), Gaps = 85/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E   + + +IE P     G  +      L++ L   P  IA
Sbjct: 2   DYKEIIAERIKE---NVDLELDFI-KGLIEIPPKPEMGDYAFP-CFQLAKTLRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           E + +++      + +   G  ++N ++  +   K  L  ++  G  YG++ +GKG  V 
Sbjct: 57  EELKSKLDK-EYFEKIENLGP-YLNFFVDKAAFTKDTLEKVLKEGENYGKSELGKGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF S N   P HVGH     VG+ L  +++  GY  TR  ++ D G Q   L  +    
Sbjct: 115 VEFSSPNIAKPFHVGHLFSTSVGNALYKIISSQGYNCTRINHLGDWGTQFGKLISAYKRW 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMM 242
             +   + D   P      +Y+K       +      L+     +   ++D   +  A+ 
Sbjct: 175 CDEDSLHKD---PIKELLRIYVKFH----EEAEKDPSLDEEGRMYFKKLEDGCEEEVALW 227

Query: 243 KIIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           K  +D  L+     +D+   E D + G+      +  ++D + + G + +       S  
Sbjct: 228 KKFKDLSLREFKKIYDLLNVEFDSYAGESFYSDKMDAVVDEIDKTGILVD-------SNG 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMG 357
            +   +D   L              + KSDG+  Y   DL A    K    FD  IYV+G
Sbjct: 281 AKVVMLDDYNL----------PPCIVKKSDGATIYATRDLTAAIYRKKTYDFDKCIYVVG 330

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
            D S Y +++ A    + +      V +   +  + D    K+S R GD I L  +++  
Sbjct: 331 LDQSLYFRQIFATLKLMGKDWVDSCVHVGFGLVRFADK---KLSTRKGDVIFLEDLLNRA 387

Query: 416 -----------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                  ++G  +V F  L       + FD+ ++     E    
Sbjct: 388 IERTLEIINEKNPELENKEEVAKKIGVGAVIFTYLKNNRERDIVFDWNEMLSFEGE-TGP 446

Query: 453 YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           YVQY+YAR +SI R+A   I  ++D+                 E +LI  L  + + + +
Sbjct: 447 YVQYSYARGKSILRKAPAGISENVDYSKLSSK----------EEFELIKILHGFNKAVLS 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP+ +  Y+ D A  F+  ++          + A +  +   R+QLV A   +I 
Sbjct: 497 AINKLEPFIVTRYVIDAAKAFNKFYNAH------SIINAEDEGVKAARIQLVKASCQVIK 550

Query: 572 SGLNIIGVESPNEM 585
           +GLN++G++   +M
Sbjct: 551 NGLNLLGIDVVEKM 564


>gi|315221535|ref|ZP_07863455.1| arginyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189369|gb|EFU23064.1| arginyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 562

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 131/613 (21%), Positives = 238/613 (38%), Gaps = 91/613 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S L   +  +D    +        ++E+P+    G ++   A  L++     P  IA 
Sbjct: 7   IASELAKVIDSLDQDAILN-------LLEKPKSSDLGDIAFP-AFSLAKVERKAPQAIAT 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I  +I    + + V   G  ++N +L  S +  +++  IV  G  YG+   G G  + I
Sbjct: 59  DIAEKID-STNFEKVVATGP-YVNFFLDKSKISAQVIKEIVKEGNNYGQQNEGNGENITI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   P  VGH R  V+GD L+++    GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DLSSPNIAKPFSVGHLRSTVIGDALSNIFRKLGYNTIKINHLGDWGKQFGLLMVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
            ++A+  N    P      +Y++      A+  +   L+     W   ++D    + +  
Sbjct: 177 SKEAVEAN----PIDELLKLYVR----INAEIETDPELDDEGRLWFKKLEDGDPEATELW 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  N  + +   E D   G+      + + I  L  +G + E       SK 
Sbjct: 229 QWFRDESLKEFNRIYKLLGVEFDSLAGEAFYNDKMDEGIKILEEKGLLEE-------SKG 281

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
               ++D   L              + KSDG+  Y   D+A    +     F   IY +G
Sbjct: 282 ASIVNLDDVNL----------PPAMIKKSDGATLYITRDIATAMYRARTYNFVKNIYAVG 331

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
            + + + ++L+AV   +    +  +++  +   + ++    K+S R G+ I         
Sbjct: 332 QEQANHFRQLKAVLKKMGFDWSD-DMIHVDFGLVTKN--RQKLSTRKGNIILLEPTLQEA 388

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V   VG  +V+F  L        DFD   +     E    
Sbjct: 389 ISRAKSQIEAKNPDLENKEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGE-TGP 447

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYAYAR +SI R+A           F  +     S  D    ++I  L ++ RV++ A
Sbjct: 448 YIQYAYARIQSILRKAD----------FRPSAEATYSLDDAESWEIIKLLQDFARVVKRA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P  +A Y   LA  F+  ++H R          +       RL L +A A ++  
Sbjct: 498 ADNYDPSLIAKYAISLAQAFNKFYAHTRIL--------DESPERDSRLALSYATAVVLKE 549

Query: 573 GLNIIGVESPNEM 585
            L ++G+++P +M
Sbjct: 550 SLRLLGIDAPEKM 562


>gi|15600244|ref|NP_253738.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107104151|ref|ZP_01368069.1| hypothetical protein PaerPA_01005224 [Pseudomonas aeruginosa PACS2]
 gi|254238242|ref|ZP_04931565.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|296391898|ref|ZP_06881373.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|23822207|sp|Q9HUC8|SYR_PSEAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|9951342|gb|AAG08436.1|AE004918_6 arginyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126170173|gb|EAZ55684.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 587

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 119/604 (19%), Positives = 222/604 (36%), Gaps = 78/604 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     +   +   I +E  +D +HG  ++N AM+L++P G+ P  +A 
Sbjct: 5   IRQLIQQALDQLTADGTLPAGLTPDIQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  I     +  V IAG GF+N +    +L   L   +      G    G   +V I+
Sbjct: 65  RLVEAIPAHEQLAKVEIAGPGFLNFFQDHVWLAASLDRALAD-ERLGVRKAGPAQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L   +  +  
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDTVIRQNHVGDWGTQFGMLLAYLEEQPV 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A      DL   Y           E AD+    ++     +   L +   ++  ++   
Sbjct: 184 DA-EAELHDLEVFYRAAKKRFDESPEFADRARELVVKLQAGDPDCLRLWTRFNEISLSHC 242

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +   + E  ++      +  ++ +L  +G + E              
Sbjct: 243 QKV-YDRLGVKLSMADVMGESAYN----DDLAQVVADLTAKGLLTE-------DNGALCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            ++  +        G+ +   + K+ G Y Y   DLA  + ++     D ++Y +    +
Sbjct: 291 FLEEFK-----NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRHNVLHADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +++  VA       A + +       +   DG P K   R G  + L  +++E    
Sbjct: 346 LHFQQVFEVARRAGFVPAGMELEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLEEAESR 403

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG DSV++  L +  +    F+F  +   
Sbjct: 404 AYALVKERNEQRAERGEEPFDEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNFELMLSF 463

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YA  R  S+FR+       L   +               EL L   LA++
Sbjct: 464 -EGNTAPYLLYACTRVASVFRKLGQGREQLGGKIV---------LEQPQELALAAQLAQF 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             +I N  +   P+ L  YLY+LA +F   + H         + A +      RL+L   
Sbjct: 514 GDLINNVALKGVPHLLCAYLYELAGLFSSFYEHC------PILTAEDPAQKDSRLRLAAL 567

Query: 566 VASI 569
               
Sbjct: 568 TGRT 571


>gi|52143263|ref|YP_083566.1| arginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81688178|sp|Q63C01|SYR1_BACCZ RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|51976732|gb|AAU18282.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 562

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 238/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             +A+   D   P      +Y++   +   D+     L      W   ++   + +V+  
Sbjct: 177 GNEAVVKED---PIRELFKLYVQFHEEIKDDEE----LEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|324507191|gb|ADY43051.1| Arginyl-tRNA synthetase [Ascaris suum]
          Length = 756

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/624 (22%), Positives = 247/624 (39%), Gaps = 78/624 (12%)

Query: 6   DFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--- 59
           DF   +   LK++  +         +   I I        G    N++M++S+ LG    
Sbjct: 167 DFGDSIVGILKQLFTEAVHKAYPDLLDIPITITETSIAKFGDYQFNSSMVISQKLGQRGI 226

Query: 60  --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
              P  +A++I+  I     ++ V +AG G++N++L+   +  I++   + G+   R   
Sbjct: 227 KTPPRDVAKVILDNIPPCEKIEKVEVAGPGYVNVFLNKKAIAAIIARTAIKGVSMPR--- 283

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               +V ++F S N    MHVGH R  ++GD++  L    G++V R  +I D G Q   L
Sbjct: 284 ISKRRVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFELVGFDVIRLNHIGDWGTQFGML 343

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY- 236
              +  R+   L       P       Y +   +   D+      +    K      D+ 
Sbjct: 344 IAHLQNRFPNFLTETP---PIADLQAFYKESKKRFDEDEKFKARAHDCVVKLQSYDADFV 400

Query: 237 -SVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            + Q +  + R D   +  + DI I E    F+R   + + D++  L  +G +       
Sbjct: 401 KAWQMICDVSRKDFTRIYDRLDIRIIERGESFYR---NMMADVVRELDEKGVLKLD---- 453

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
                      D ++L+F S   G ++   ++KSDG  TY  +DLA  K + E    D +
Sbjct: 454 -----------DGRKLMFPS---GCEIPLTVVKSDGGNTYDTSDLAAIKHRLEVEKADWI 499

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV+ S  S +++ + A A  +   K +   +      L       K   R+GD I L  
Sbjct: 500 IYVVDSGQSLHLETIFAAARDLGWYKCEEKRVEHVSFGLVLGEDRKKFKTRSGDTIRLTD 559

Query: 413 VVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
           ++DE                             V    V++  L +  ++   F F K+ 
Sbjct: 560 LLDEGIRRAAAKLQEKERDKVMSPQELEEARDAVAYGCVKYADLSQTRTQDYVFSFDKML 619

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVH 501
           +  + N   Y+ YAYAR RSI R A      +       P   +P E E   +E +L   
Sbjct: 620 D-DRGNTAVYLLYAYARIRSICRNAGISREQIIDYAQNLPEGALPLEHE---AEYKLAKT 675

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           + ++   I         +++  Y+Y LA+ FH  ++      + R     N  +   RL 
Sbjct: 676 ILKFSDCILTVLDTLFLHQVCDYVYSLATTFHDFYNDCYVIHKDR---EGNTTIYYHRLV 732

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L    A ++ +   I+G+ +   M
Sbjct: 733 LCQVTADVMANCFQILGIRNVQRM 756


>gi|194894171|ref|XP_001978023.1| GG19367 [Drosophila erecta]
 gi|190649672|gb|EDV46950.1| GG19367 [Drosophila erecta]
          Length = 664

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 126/588 (21%), Positives = 235/588 (39%), Gaps = 77/588 (13%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
              G    N AM LS+ L        P  IA  +       P ++ + IAG GF+N++LS
Sbjct: 112 AKFGDYQCNNAMGLSKKLKEKGISKAPRDIATELKGHCPPSPLIEKLEIAGAGFVNVFLS 171

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y    LS+++  G+E       K  +V ++F S N    MHVGH R  ++G++L  L+
Sbjct: 172 KDYAASALSNLLRYGVEPPE---VKKRRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLL 228

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E
Sbjct: 229 EFLQHDVIRTNHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEE 288

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +  S +++  +     I    + + +  + R + + +  + DI I E    F++   
Sbjct: 289 FKKRAYSRVVSLQKGVPNSI---KAWELICNVSRKEFQTIYERLDISIKERGESFYQ--- 342

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  +++ L  +G + E              D  RK +    T  G  +   ++KSDG 
Sbjct: 343 SRMLSVVEYLRGKGLLEE--------------DEGRKIMWPDDTKTG--IPLTIVKSDGG 386

Query: 331 YTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLC 386
           +TY  +D+A  + + E    D +IYV+ +  S +   +   A     ++    +++ +  
Sbjct: 387 FTYDTSDMAAIRYRLEEELCDWIIYVVDAGQSTHFNTIFKAAERSTILNPLTHRVDHV-Q 445

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             V L  DG   K   R+GD + L  ++DE                             +
Sbjct: 446 FGVVLGEDGK--KFKTRSGDTVKLADLLDEGLKRSLLQLESRGRDKVLTPQELKDAQESL 503

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +++  L         F F K+ E  + N   Y+ Y Y R  SI R   + F +L  
Sbjct: 504 AYGCIKYSDLCHNRISDYIFSFDKMLE-DRGNTAVYLLYTYTRICSIARNCGEDFSNLPE 562

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L   N++         E +L   L +   ++   +     + L  + +++ +VF   + 
Sbjct: 563 ILKKTNIV----LAHEKEWKLAKTLLKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYD 618

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +  Q +   +   R+ L  A A+++     I+G++  ++M
Sbjct: 619 SCYCIEKNK--QGDIIAVNHSRILLCEATAAVLRQCFYILGLKPVSKM 664


>gi|304384651|ref|ZP_07366997.1| arginine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328845|gb|EFL96065.1| arginine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 562

 Score =  388 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 135/611 (22%), Positives = 257/611 (42%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++   LK +  +   + +I ++  IE P++   G L+      L++ L   P  IA
Sbjct: 2   DYKNQVVAALKPVLNEYLSDSEIYEK--IEVPKESKLGDLAFP-TFTLAKVLRKAPQMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +V +I      + V +AG  +IN +L   ++  ++L +++     YG N  G+   V 
Sbjct: 59  QDLVEKIDQSD-FEKVEVAGP-YINFFLDKQAFGEEVLRTVLDQKSAYGDNDNGQNGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G++LA +M  +GY   +  ++ D G Q   L  +   W
Sbjct: 117 IDMSSPNIAKPISMGHLRSTVIGNSLALIMEKNGYHPIKINHLGDWGTQFGKLITAYKLW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             ++ +  +  +    YY   + +     EL D            +E+   + K +   +
Sbjct: 177 GSEEDVKADPINKLLEYYVRFHKEDKEKPELDDIARDWFKKLEDGDEEATNLWKWFREVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    +     L I  D +  E  ++      + +I+  L  +  + E       S+  Q
Sbjct: 237 LQS-FKQIYDKLGITFDSYKGEAFYN----DKMDEIVQILEDKDLLKE-------SRGAQ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    +Y    F   +YV+G++
Sbjct: 285 VVDLEKYNL----------NPALIKKTDGATLYITRDLAAALYRYRTYNFVQSLYVVGAE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---- 415
            + + K+L+AV   +    +  ++   +   +  +G   K+S R+G  + L  V++    
Sbjct: 335 QTNHFKQLKAVLKEMGYDWSD-DIHHIQFGLITLNGK--KLSTRSGRVVLLDEVLNDAVT 391

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                EVG  +V F  L  + +   DF+   V     E    YV
Sbjct: 392 LAKKQINEKNPDLANADTVAKEVGVGAVVFHDLKNERTNSFDFNLEDVVRFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY+ AR  SI R+A                  Q    D +    +  L E+P V++ A  
Sbjct: 451 QYSRARAESILRKAD-----------TEVTTDQLKITDANAWDTLKALQEFPSVVQRAAA 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ ++++ R       + A++ +    RL LV +V+ ++   L
Sbjct: 500 QYEPSVIAKYALSLAKSFNKYYANSR-------ILADDAE-KPARLALVKSVSLVLEEAL 551

Query: 575 NIIGVESPNEM 585
            ++GV++P+EM
Sbjct: 552 RLLGVKAPDEM 562


>gi|228914787|ref|ZP_04078396.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845106|gb|EEM90148.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 562

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             +A+   D   P      +Y++   +   D+     L      W   ++   + +V+  
Sbjct: 177 GNEAVVKED---PIRELFKLYVQFHEEVKVDEE----LEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|124024975|ref|YP_001014091.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166232821|sp|A2C016|SYR_PROM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123960043|gb|ABM74826.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 607

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/648 (21%), Positives = 244/648 (37%), Gaps = 111/648 (17%)

Query: 6   DFSSRLKNYLKEIDCKIKVEK-------KILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           + S+RL+  L     K+  ++        IL    +        G    N A+ L++ + 
Sbjct: 3   EISARLEEALNRAFTKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEIN 62

Query: 59  LDPLTIAELIVARIKIDPDVDSVF----IAGKGFIN-------------LYLSPSYLRKI 101
             P  IA+ I  +++ D D   +     IAG GFIN               L+   L   
Sbjct: 63  RPPRDIAQQIAKQLQQDNDFVRICNPPLIAGPGFINLSINSKTLISEIHFRLNDKRLGVP 122

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L       IE  ++      +V I+F S N    MHVGH R  ++GD+LA ++ F GYEV
Sbjct: 123 LKKFNTDKIEEEKSN----NRVIIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFCGYEV 178

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKY 217
            R  ++ D G Q   L   +     + L+  D    SDL   Y          +   +K 
Sbjct: 179 LRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDEDQIFQNKS 238

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            SE++N        ++   + Q +    R + + +  + DI ++E      +   + D+I
Sbjct: 239 RSEVVNLQAGDKESLI---AWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFLV-DVI 294

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLL--KSDGSYTYF 334
           ++L  +  +                +    Q +F   +VG D   +P++  KSDG + Y 
Sbjct: 295 NDLKNKKLL---------------INDQGAQCIFLDGLVGKDGKPQPIIIQKSDGGFNYA 339

Query: 335 AADLAYFKCK-----YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             DLA  K +     +  G   +IYV  +  + +   +  +A   +       +      
Sbjct: 340 TTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANWIPTDCQIEHVPFG 399

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VG 418
            L +     K+  R+G+ I L  ++DE                               VG
Sbjct: 400 -LVQGEDGKKLKTRSGETIRLVDLLDEAIQRARDDLKNRLNTESRSENENFIDKVSTTVG 458

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             S+++  L +       F F K+    + N   Y+ YA  R   I R+  D        
Sbjct: 459 IASIKYADLSQNRISNYQFSFDKMLSL-QGNTAPYLLYALVRIAGISRKGGD-------- 509

Query: 479 LFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
               NV  Q  +F+ S E  LI  L +   +I        P +L  YL++L+  F+  + 
Sbjct: 510 ---LNVSSQNIQFNESQEWDLIRKLLQLDSIIAEVEKELLPNRLCGYLFELSQTFNRFYD 566

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 ++  ++A+       RL L    A  +  G++++G+ +   M
Sbjct: 567 ------QVPILKASEPS-RASRLVLCSITADTLKLGMSLLGIPTLERM 607


>gi|78185701|ref|YP_378135.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|109895047|sp|Q3AVY5|SYR_SYNS9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78169995|gb|ABB27092.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 590

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/629 (22%), Positives = 234/629 (37%), Gaps = 92/629 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L   L+    +   + +      +        G    N A+ L++PL   P  IA 
Sbjct: 4   LSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPEFGDFQANGALPLAKPLKQPPRQIAT 63

Query: 67  LIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV ++  D        +  IAG GFINL + P  L + L++ + +    G  ++     
Sbjct: 64  AIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARLGTD-RLGVPVVEDVAP 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 123 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHVGDWGTQFGMLITHLK 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               + L   D+              +G +L   Y      F ++          V  + 
Sbjct: 183 QVAPETLDTADA------------VDLG-DLVAFYREAKKRFDDDDDFQATSRDEVVKLQ 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQK 301
                 LKA  +  D         R +   + D +D  L  +G  +     P      + 
Sbjct: 230 GGDPVSLKAWGLLCDQ-------SRREFQKLYDRLDIRLTERGESFYNPYLPAVLDGLKA 282

Query: 302 CDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-----ERGF 349
            D+    D  Q +F   + G D   +   + K DG + Y   DLA  + ++         
Sbjct: 283 VDLLVTDDGAQCVFLEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRFRFASPPTGDAA 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +IYV  +  + +   +  VA         A++  +   LV+   DG   K+  RAGD 
Sbjct: 343 QRVIYVTDAGQANHFAGVFQVAERAGWIPDGARLEHVPFGLVQ-GEDGK--KLKTRAGDT 399

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 400 VRLRDLLDEAVERSEQDLRSRLQEEERTESDAFISHVATTVGLAAVKYADLSQNRLTNYQ 459

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+  D+           N   Q SE    E 
Sbjct: 460 FSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLGVS--------NAALQFSE--PQEW 508

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++ RVI        P +L  YL++L+ VF+  +       ++  ++A    L+
Sbjct: 509 ALVRELLKFDRVIVEVEDELLPNRLCSYLFELSQVFNRFYD------QVPVLKAEPEALS 562

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L    A  +  GL ++G+ +   M
Sbjct: 563 -SRLALCRHTADTLRCGLALLGIPTLERM 590


>gi|254526915|ref|ZP_05138967.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538339|gb|EEE40792.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 604

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 130/632 (20%), Positives = 230/632 (36%), Gaps = 84/632 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKIL---SSIVVSGIEYGRN 115
            I+   +  +  +        S+ IAG GFIN+ L  + L   +        +GI   R 
Sbjct: 66  DISNDFINLLNKNKSISKLCKSLEIAGPGFINIKLKDAVLINEIKSNIQCNRAGITLIRK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            +  G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D G Q
Sbjct: 126 DLDSGFSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L   +   Y   L        SDL E Y           E   +   E++   +   
Sbjct: 186 FGMLITQLKDLYSNDLEEIGKIKISDLVEFYKESKKRFDNESEFQKRSREEVVKL-QRGD 244

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +  +K  + + +    R +   +     I I E      +P  ++ +ID+L  +  + E 
Sbjct: 245 IKSIK--AWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNP-FLKSVIDDLNLKKILVE- 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-- 347
                  +  +   +D       +   G  +   + K DG + Y   DLA  + ++ +  
Sbjct: 301 ------DQGAKCVFLDG-----MTNKEGKPLPLIIQKKDGGFNYATTDLAAIRYRFNKPP 349

Query: 348 ---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                  +IYV     + +   +  VA           V       L +     K+  R 
Sbjct: 350 NGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPENRQVDHVPFG-LVQGIDGKKLKTRE 408

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           G+ I L+ +++E                               +G  +V++  L +    
Sbjct: 409 GETIRLKDLLNEAVRRAKEDLLKRLKDEERYETEEFIANTSRIIGLGAVKYADLSQNRIT 468

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+      N   Y+ Y   R   I R+   ++   DF                
Sbjct: 469 NYQFSFDKMLSL-NGNTAPYLLYTLVRILGIKRKNDFVYDSKDFQYVNYE--------HK 519

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +LI  L ++  VI +      P +L  YL++L   F+  +    + P L+      +
Sbjct: 520 SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYD---QVPILK----EEK 572

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + RL L    A  +   L ++G+E+   M
Sbjct: 573 YIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|289193278|ref|YP_003459219.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939728|gb|ADC70483.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 566

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 151/610 (24%), Positives = 264/610 (43%), Gaps = 75/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S + N LKE+  K ++ K++   I +++  +   G  S N    L++ L  +P  IA
Sbjct: 2   DIKSNIINALKEVISK-EIGKEL--DIKLDKTPNLELGDYSVNICFRLAKELKKNPKIIA 58

Query: 66  ELIVARIKIDPDVDSVFI-AGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           E +V ++K         I A  G+IN Y+    + + +L  I   G +YG+    KG K+
Sbjct: 59  EELVDKLKAMNIEGVKEIKAVNGYINFYIDYNKFAKHLLGDIDKKGNDYGKGD-KKGIKI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E  SANP GP+H+GH R A++GD L  ++ F GY+V   YY+ND G Q+  +   +  
Sbjct: 118 ILEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQMALVVYGIDL 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDY 236
                    D  + E Y                  EL  +Y   L      +      ++
Sbjct: 178 FGLDENKKKDHAIAETYVKINKYLEEHPEEEEKILELMREYEDALEKNENNEITKKF-EF 236

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V   +  I++ L  LNI+HD F+ E  + R     ++++I  L   G V          
Sbjct: 237 AVNYALDGIKETLNNLNIKHDTFVWESSYVRN--GLVKEVIKKLMETGKV---------- 284

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                  +  +  +   +  G      L +++G+  Y   D+AY   K  +  D  I V+
Sbjct: 285 -------IKEETYMLDLSEFGIQKKMVLARANGTSLYSTRDIAYHLDKLSK-CDIGIDVL 336

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+DH    + ++A    +  K     V+  E + L        MS R G FI+   +++E
Sbjct: 337 GADHKLTAEMVKAALKLLGSKVP--EVIFYEFISLPEG----SMSTRRGRFISADELLEE 390

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +G  +VR+ +      + + F + +  +  K    F +Q
Sbjct: 391 AIKRAKEECNKRGVEENIAYDIGLGAVRYNIARISPEKPMVFKWEEALDFEKVGCPF-IQ 449

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+ARC SI ++A++     D  +F         E    E +LI  L E+  +I+ +   
Sbjct: 450 YAHARCCSILKEAENKGVK-DEAVFNY-------ELTNEEKELIKMLDEFKDIIKESAEN 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           ++ + LA YL +LA VF+  +++    P L     +N  +   RL+LV +  +++  GL 
Sbjct: 502 RKVHVLANYLLELAKVFNRFYANC---PILMTKVDDN--VKKSRLKLVKSTKTVLEIGLG 556

Query: 576 IIGVESPNEM 585
           ++G+  P  M
Sbjct: 557 LLGIRCPGRM 566


>gi|218894150|ref|YP_002443019.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226701383|sp|B7V3E4|SYR_PSEA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218774378|emb|CAW30195.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 587

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 119/604 (19%), Positives = 221/604 (36%), Gaps = 78/604 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     +   +   I +E  +D +HG  ++N AM+L++P G+ P  +A 
Sbjct: 5   IRQLIQQALDQLTADGTLPAGLTPDIQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  I     +  V IAG GF+N +    +L   L   +      G    G   +V I+
Sbjct: 65  RLVEAIPAHEQLAKVEIAGPGFLNFFQDHVWLAASLDRALAD-ERLGVRKAGPAQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L L+      
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDTVIRQNHVGDWGTQFGML-LAYLEEQP 182

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
                   DL   Y           E AD+    ++     +   L +   ++  ++   
Sbjct: 183 IDAEAELHDLEVFYRAAKKRFDESPEFADRARELVVKLQAGDPDCLRLWTRFNEISLSHC 242

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +   + E  ++      +  ++ +L  +G + E              
Sbjct: 243 QKV-YDRLGVKLSMADVMGESAYN----DDLAQVVADLTAKGLLTE-------DNGALCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            ++  +        G+ +   + K+ G Y Y   DLA  + ++     D ++Y +    +
Sbjct: 291 FLEEFK-----NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRHNVLHADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +++  VA       A + +       +   DG P K   R G  + L  +++E    
Sbjct: 346 LHFQQVFEVARRAGFVPAGMELEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLEEAESR 403

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG DSV++  L +  +    F+F  +   
Sbjct: 404 AYALVKERNEQRAERGEEPFDEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNFELMLSF 463

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YA  R  S+FR+       L   +               EL L   LA++
Sbjct: 464 -EGNTAPYLLYACTRVASVFRKLGQGREQLGGKIV---------LEQPQELALAAQLAQF 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             +I N  +   P+ L  YLY+LA +F   + H         + A +      RL+L   
Sbjct: 514 GDLINNVALKGVPHLLCAYLYELAGLFSSFYEHC------PILTAEDPAQKDSRLRLAAL 567

Query: 566 VASI 569
               
Sbjct: 568 TGRT 571


>gi|222153884|ref|YP_002563061.1| arginyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782986|sp|B9DW76|SYR_STRU0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222114697|emb|CAR43791.1| arginyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 562

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 240/611 (39%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + N + ++  ++  E       ++E P++   G ++   A  L++ L   P  IA
Sbjct: 2   DTKTLIANDIAKVVPELDQETIYN---LLETPKNSDMGDVAFP-AFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  S +  ++L +++     YG+  IG G  V 
Sbjct: 58  GELAEKIDA-AQYEKVMAVGP-YINFFLDKSSISKEVLEAVIKEKANYGQQHIGDGQNVT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           ++  S N   P  VGH R  V+ D +  + +  GY   R  ++ D G Q   L ++   W
Sbjct: 116 LDMSSPNIAKPFSVGHLRSTVIADAIGHIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             +  +  N  D     Y  +  +       D+ + +    L   +++   + + +  ++
Sbjct: 176 GDRATVEANPIDELLKLYVRINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     L++  D F  E  ++      + + I  L  +  + E       SK  Q
Sbjct: 236 LVEFNRI-YDKLDVSFDHFHGEAFYN----DKMDEGIQILEDKNLLKE-------SKGAQ 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + KSDG+  Y   D+A    +     F   IYV+G +
Sbjct: 284 IVDLEKYNL----------PPALIKKSDGATLYITRDMATAMYRQRTFNFVKNIYVVGQE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            S + K+L+AV   +    +  +++      + ++    K+S R G+ I           
Sbjct: 334 QSHHFKQLKAVLKEMGFDWSD-DMIHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAVS 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +V+F  L        DFD   +     E    YV
Sbjct: 391 RALTQIEAKNPDLENKEDVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +SI R+A           F  N     S  D    ++I  L  +   IE A  
Sbjct: 450 QYTYARIQSILRKAD----------FTPNEETPYSLNDAESWEIIKLLQGFAANIERAAE 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A +   LA  F+ +++H R          +  +    RL L +A A ++   L
Sbjct: 500 KYDPSIIAKFAIQLAQSFNRYYAHTRIL--------DESEERDSRLALCYATAVVLKESL 551

Query: 575 NIIGVESPNEM 585
            ++GV++P +M
Sbjct: 552 RLLGVQAPEKM 562


>gi|289422685|ref|ZP_06424525.1| arginine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156864|gb|EFD05489.1| arginine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 570

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 128/614 (20%), Positives = 243/614 (39%), Gaps = 76/614 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            ADF   +   +K     + VE+    + ++E P +   G  +      L++     P  
Sbjct: 1   MADFKQVIAESIKTKVEDLTVEE---IKGLLEVPPNKEMGDYAF-PCFKLAKIFRKAPNM 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTK 122
           IAE +   I++   V      G G++N +++   L K + + V    E YG++ +G G  
Sbjct: 57  IAEDLSTSIELGEGVTKCINLG-GYVNFFVAKDALAKKVITQVFDERENYGKSDLGGGKT 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           V I++ S N   P H+GH R  V+G+ L  + +  GY+V R  ++ D G Q   L ++  
Sbjct: 116 VVIDYSSPNIAKPFHIGHIRTTVIGNALYKIYSSQGYKVERINHLGDYGTQFGKLIVAYK 175

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSV 238
            W  + A+      +L + Y           E+ D+  +        + +   + + +  
Sbjct: 176 LWGDKSAVEAEPIKELLKLYVRFHDEAESKPEMEDEARAWFTRLENNDPEAKELWQWFRD 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +++ +  R     L I  D +  E  +       +  +++ L ++  + E       S+ 
Sbjct: 236 ESLKEFQRV-YDLLEIDFDSYAGESFY----SDKMPAVLEELRQKNLLVE-------SQG 283

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
           T   D++   L              + K+DGS  Y   DLA    +     FD  IYV+G
Sbjct: 284 TMIVDLEDVNL----------PPALIQKNDGSTLYITRDLAAAFYRKNTYDFDKAIYVVG 333

Query: 358 SDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-- 414
           S    + K+L  V   +       +N +   +V L        MS R G  + L  V+  
Sbjct: 334 SQQELHFKQLFNVIRKMGYDWYKDMNHVQFGMVALEEG----TMSTRKGRVVFLEDVLRQ 389

Query: 415 -----------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   EVG  +V F  L     +   F + +      E   
Sbjct: 390 AIDKTREIIMEKNPGAGDIDKIAKEVGVGAVVFQELSNSRIKDYTFSWSRTLSFEGE-TG 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY +ARC ++ R+A     +L+        I  +   D     ++  +  + + I+ 
Sbjct: 449 PYVQYTHARCCALKRKA-----NLEISADLVANINFDLLSDEDSSDVLKVIETFNKSIQT 503

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +    EP+ +  ++ DLA  F+  + +         +   +++L + RL LV +    I 
Sbjct: 504 SMRKNEPHIVTRFVLDLAQAFNKFYHNN-------PIIVEDKELMIARLALVESTRQTIE 556

Query: 572 SGLNIIGVESPNEM 585
           + L+++G+++P +M
Sbjct: 557 NALDLLGMKAPEKM 570


>gi|313110089|ref|ZP_07795991.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310882493|gb|EFQ41087.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 587

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 121/604 (20%), Positives = 223/604 (36%), Gaps = 78/604 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     +   +   I +E  +D +HG  ++N AM+L++P G+ P  +A 
Sbjct: 5   IRQLIQQALDQLTADGTLPAGLTPDIQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAA 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  I     +  V IAG GF+N +    +L   L   +      G    G   +V I+
Sbjct: 65  RLVEAIPAHEQLAKVEIAGPGFLNFFQDHVWLAASLDRALAD-ERLGVRKAGPAQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L   +  +  
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDTVIRQNHVGDWGTQFGMLLAYLEEQPV 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A      DL   Y           E AD+    ++     +   L +   ++  ++   
Sbjct: 184 DA-EAELHDLEVFYRAAKKRFDESPEFADRARELVVKLQAGDPDCLRLWTRFNEISLSHC 242

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +   + E  ++      +  ++ +L  +G + E              
Sbjct: 243 QKV-YDRLGVKLSMADVMGESAYN----DDLAQVVADLTAKGLLTE-------DNGALCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            ++     FR    G+ +   + K+ G Y Y   DLA  + ++     D ++Y +    +
Sbjct: 291 FLEE----FR-NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRHNVLHADRVLYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +++  VA       A + +       +   DG P K   R G  + L  +++E    
Sbjct: 346 LHFQQVFEVARRAGFVPAGMELEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLEEAESR 403

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG DSV++  L +  +    F+F  +   
Sbjct: 404 AYALVKERNEQRAERGEEPFDEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNFELMLSF 463

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YA  R  S+FR+       L   +               EL L   LA++
Sbjct: 464 -EGNTAPYLLYACTRVASVFRKLGQGREQLGGKIV---------LEQPQELTLAAQLAQF 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             +I N  +   P+ L  YLY+LA +F   + H         + A +      RL+L   
Sbjct: 514 GDLINNVALKGVPHLLCAYLYELAGLFSSFYEHC------PILTAEDPAQKDSRLRLAAL 567

Query: 566 VASI 569
               
Sbjct: 568 TGRT 571


>gi|315286577|gb|EFU46012.1| arginyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 543

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 123/571 (21%), Positives = 227/571 (39%), Gaps = 66/571 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G+   N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGNYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S        + + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGV--AMPEK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEID----EEQLAAAPVIIRE----DREAQLAARLLQFEET 506

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           +        P+ +  YLYDLA +F G + H 
Sbjct: 507 LTVVAREGTPHVMCAYLYDLAGLFSGFYEHC 537


>gi|270290467|ref|ZP_06196692.1| arginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270281248|gb|EFA27081.1| arginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 562

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 135/611 (22%), Positives = 257/611 (42%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++   LK +  +   + +I ++  IE P++   G L+      L++ L   P  IA
Sbjct: 2   DYKNQVVAALKPVLNEYLSDSEIYEK--IEVPKESKLGDLAFP-TFTLAKVLRKAPQMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +V +I      + V +AG  +IN +L   ++  ++L +++     YG N  G+   V 
Sbjct: 59  QDLVEKIDQSD-FEKVEVAGP-YINFFLDKQAFGEEVLRTVLDQKSAYGDNDDGQNGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G++LA +M  +GY   +  ++ D G Q   L  +   W
Sbjct: 117 IDMSSPNIAKPISMGHLRSTVIGNSLALIMEKNGYHPIKINHLGDWGTQFGKLITAYKLW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             ++ +  +  +    YY   + +     EL D            +E+   + K +   +
Sbjct: 177 GSEEDVKADPINKLLEYYVRFHKEDKEKPELDDIARDWFKKLEDGDEEATNLWKWFREVS 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    +     L I  D +  E  ++      + +I+  L  +  + E       S+  Q
Sbjct: 237 LQS-FKQIYDKLGITFDSYKGEAFYN----DKMDEIVQILEDKDLLKE-------SRGAQ 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + K+DG+  Y   DLA    +Y    F   +YV+G++
Sbjct: 285 VVDLEKYNL----------NPALIKKTDGATLYITRDLAAALYRYRTYNFVQSLYVVGAE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---- 415
            + + K+L+AV   +    +  ++   +   +  +G   K+S R+G  + L  V++    
Sbjct: 335 QTNHFKQLKAVLKEMGYDWSD-DIHHIQFGLITLNGK--KLSTRSGRVVLLDEVLNDAVT 391

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                EVG  +V F  L  + +   DF+   V     E    YV
Sbjct: 392 LAKKQINEKNPDLANADTVAKEVGVGAVVFHDLKNERTNSFDFNLEDVVRFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY+ AR  SI R+A                  Q    D +    +  L E+P V++ A  
Sbjct: 451 QYSRARAESILRKAD-----------TEVTTDQLKITDANAWDTLKALQEFPSVVQRAAA 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ ++++ R       + A++ +    RL LV +V+ ++   L
Sbjct: 500 QYEPSVIAKYALSLAKSFNKYYANSR-------ILADDAE-KPARLALVKSVSLVLEEAL 551

Query: 575 NIIGVESPNEM 585
            ++GV++P+EM
Sbjct: 552 RLLGVKAPDEM 562


>gi|195479011|ref|XP_002100732.1| GE16015 [Drosophila yakuba]
 gi|194188256|gb|EDX01840.1| GE16015 [Drosophila yakuba]
          Length = 664

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 123/588 (20%), Positives = 234/588 (39%), Gaps = 77/588 (13%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
              G    N AM LS+ L        P  IA  +       P ++ + IAG GF+N++LS
Sbjct: 112 AKFGDYQCNNAMGLSKKLKEKGISKAPRDIATELKGHCPPSPLIEKLEIAGAGFVNVFLS 171

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y    LS+++ +G+           +V ++F S N    MHVGH R  ++G++L  L+
Sbjct: 172 KDYAASALSNLLRNGVSPPE---VNKRRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLL 228

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E
Sbjct: 229 EFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEE 288

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +  S +++  +     I    + + +  + R + + +  + DI I E    F++   
Sbjct: 289 FKKRAYSRVVSLQKGVPNSI---KAWELICNVSRKEFQTIYERLDISIKERGESFYQ--- 342

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  +++ L  +G +              + D  R+ +    T  G  +   ++KSDG 
Sbjct: 343 SRMLSVVEYLRGKGLL--------------EADEGREIMWPDDTKTG--IPLTIVKSDGG 386

Query: 331 YTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLC 386
           +TY  +D+A  + + E    D +IYV+ S  S +   +   A     ++    +++ +  
Sbjct: 387 FTYDTSDMAAIRHRVEEELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLTHRVDHV-Q 445

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             V L  DG   K   R+GD + L  ++DE                             +
Sbjct: 446 FGVVLGEDGK--KFKTRSGDTVKLADLLDEGMKRSLLQLESRGRDKVLTPQELKDAQESL 503

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +++  L         F F K+ E  + N   Y+ Y Y R  SI R   + F +L  
Sbjct: 504 AYGCIKYSDLCHNRISDYIFSFDKMLE-DRGNTAVYLLYTYTRICSIARNCGEDFSNLPE 562

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L   N++         E +L   L +   ++   +     + L  + +++ +VF   + 
Sbjct: 563 ILKKTNIV----LAHEKEWKLAKTLLKLHDILIKCSRELFLHFLCEFCFEVCTVFTEFYD 618

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +  Q +   +   R+ L  A A+++     I+G++  ++M
Sbjct: 619 SCYCIEKNK--QGDIIAVNHSRILLCEATAAVLRQCFYILGLKPVSKM 664


>gi|228939320|ref|ZP_04101912.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972198|ref|ZP_04132813.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978812|ref|ZP_04139182.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228780914|gb|EEM29122.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228787511|gb|EEM35475.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820344|gb|EEM66377.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326939896|gb|AEA15792.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 562

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 135/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L ++     E+G+N  G    V 
Sbjct: 59  KEVAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVSAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V   +  K + EL       W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHVEVKENDELEEEG-RAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+      + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNDKMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  ++ F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEVVAKQVGVGAIIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVETPEEM 562


>gi|301053706|ref|YP_003791917.1| arginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300375875|gb|ADK04779.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 562

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 239/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A +F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQLFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|196039674|ref|ZP_03106978.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029377|gb|EDX67980.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 562

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVMVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|313890374|ref|ZP_07824005.1| arginine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121217|gb|EFR44325.1| arginine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 562

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 133/612 (21%), Positives = 246/612 (40%), Gaps = 83/612 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S + + + ++  ++  E       ++E P++   G ++      L++ L   P  IA
Sbjct: 2   DTKSLIASEIAKVVPELNQETIYN---LLETPKNSDMGDIAFP-TFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + + K  L +++     YG+  IG G  + 
Sbjct: 58  AELAEKIDPS-QFEKVMAVGP-YINFFLDKTTISKNVLHAVIEEKANYGQQHIGDGQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           ++  S N   P  VGH R  V+ D +  + +  GY   R  ++ D G Q   L ++   W
Sbjct: 116 LDMSSPNIAKPFSVGHLRSTVIADAIGHIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             Q A+  N  D     Y  +  +       D+ + +    L   +++   + + +  ++
Sbjct: 176 GDQAAIEANPIDELLKLYVRINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     L++  D F  E  ++      + + I  L  +  + E       SK  Q
Sbjct: 236 LVEFNRI-YDKLDVTFDYFHGEAFYN----DKMDEGIQILEDKHLLKE-------SKGAQ 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
             D+++            D+   L+ KSDG+  Y   D+A    +     F   IYV+G 
Sbjct: 284 IVDLEKY-----------DLPPALIKKSDGATLYITRDMATAMYRQRTFNFVKNIYVVGQ 332

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           + S + K+L+AV   +    A  N++      + ++    K+S R G+ I L   +DE  
Sbjct: 333 EQSHHFKQLKAVLKEMGFDWAD-NMIHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAV 389

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V+F  L        DFD   +     E    Y
Sbjct: 390 ARALTQIESKNPDLENKEAVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPY 448

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY YAR +SI R+A           F  +V    S  D    ++I  L  +   I+ A 
Sbjct: 449 VQYTYARIQSILRKAN----------FTPDVNKDYSLKDDESWEIIKLLQSFASNIQRAA 498

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P  +A +   LA  F+ +++H R       +  ++      RL L ++ A ++   
Sbjct: 499 DKYDPSIIAKFAIQLAQAFNKYYAHTR------ILDESDE--RDSRLALCYSTAVVLKES 550

Query: 574 LNIIGVESPNEM 585
           L ++GV++P +M
Sbjct: 551 LRLLGVQAPEKM 562


>gi|30262191|ref|NP_844568.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527469|ref|YP_018818.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185032|ref|YP_028284.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872247|ref|ZP_02216885.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167632845|ref|ZP_02391171.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641054|ref|ZP_02399310.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686613|ref|ZP_02877834.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708447|ref|ZP_02898890.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650788|ref|ZP_02933685.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567906|ref|ZP_03020817.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227815009|ref|YP_002815018.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229600399|ref|YP_002866544.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254737206|ref|ZP_05194910.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743609|ref|ZP_05201294.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751521|ref|ZP_05203558.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759036|ref|ZP_05211063.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38372561|sp|Q81R81|SYR2_BACAN RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|30256817|gb|AAP26054.1| arginine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502617|gb|AAT31293.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178959|gb|AAT54335.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712040|gb|EDR17579.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510952|gb|EDR86342.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167531657|gb|EDR94322.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126686|gb|EDS95570.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170669689|gb|EDT20431.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083249|gb|EDT68310.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560961|gb|EDV14935.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004400|gb|ACP14143.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229264807|gb|ACQ46444.1| arginine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 562

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|317506285|ref|ZP_07964100.1| arginyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316255422|gb|EFV14677.1| arginyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 589

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 123/612 (20%), Positives = 222/612 (36%), Gaps = 67/612 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +++  + L+         +      +I   R   H     N  + L++ L  +P  +A 
Sbjct: 10  LAAQADSALRAAFEAALGPQAAGADPII---RPSEHADYQANGLLALAKKLKGNPRELAG 66

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA++   P    V  +G GF+NL  + + L   L++   S  + G           ++
Sbjct: 67  KVVAQLDGSPLFAHVEASGPGFVNLTFADTALAGQLAAR-GSDPKLGLGKAASRPVTVVD 125

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    MHVGH R  ++GD L  L+ FSG EV R+ ++ D G Q   L   +     
Sbjct: 126 YSAPNIAKEMHVGHLRSTIIGDALVRLLTFSGSEVIRQNHVGDWGTQFGMLIEHLLENPD 185

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A    D D P               LA  Y +    F  ++         V A+     
Sbjct: 186 VAGGEEDGDTPTISR-----------LAALYKAARARFNADEEFQTRSRQRVVALQSGDP 234

Query: 247 DDLKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + L        +   +  E  + +       + I   +      +GI    + +      
Sbjct: 235 ETLAGWQEIVAESKTYFGE-IYSKLGVLLTDEDIAGESSYNDELQGIADDLERRGVAVRS 293

Query: 304 MDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
                + F   +  D    P  + KSDG + Y A DLA  + +  +     ++YV+GS  
Sbjct: 294 EGALCVFFDDVVDKDGKPVPFIIQKSDGGFGYPATDLATLRHRVRDLKAARLLYVVGSPQ 353

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVD---- 415
           + + K +   A         +     +    L  DG P K   R G+ I L  ++D    
Sbjct: 354 ALHFKMVFETARRAGYLPEGVEAEHVQFGSVLGADGKPFK--SREGETIRLISLLDEAVA 411

Query: 416 -----------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                  EVG  +V++  L    +    FD  ++    + N   
Sbjct: 412 RARATIAERSPGLSAQAQEQRAQEVGIGAVKYADLSTSRTRDYVFDLDRMLSL-QGNTGV 470

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYA+AR RS+  +  +     D    P          + +E  L+  L E+   ++  
Sbjct: 471 YLQYAHARIRSMLARLAEAEAAPDGSEAPP--------LEPAERALVRTLDEFGATLDAV 522

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             + EP++L  YLY LA  F   +           ++A   ++   R+ +       +  
Sbjct: 523 AESLEPHRLCAYLYALAQAFSDFYEAC------PVLKAPTAQIRARRVAICELTGDTLAL 576

Query: 573 GLNIIGVESPNE 584
           GL+++G+ +P  
Sbjct: 577 GLSLLGIAAPER 588


>gi|18859963|ref|NP_573081.1| Arginyl-tRNA synthetase [Drosophila melanogaster]
 gi|20178140|sp|Q9VXN4|SYRC_DROME RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|7293140|gb|AAF48524.1| Arginyl-tRNA synthetase [Drosophila melanogaster]
 gi|17944966|gb|AAL48546.1| RE02962p [Drosophila melanogaster]
 gi|220947778|gb|ACL86432.1| Aats-arg-PA [synthetic construct]
          Length = 665

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 124/625 (19%), Positives = 246/625 (39%), Gaps = 80/625 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG---- 58
           +     S  +  +     + +    I+  +          G    N AM LS+ L     
Sbjct: 79  ITEHLESVFRQAIASAFPEFRDTPVIIAPV---NSTSAKFGDYQCNNAMGLSKKLKEKGI 135

Query: 59  -LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
              P  IA  +       P ++ + IAG GF+N++LS  Y    LS+++ +G++    + 
Sbjct: 136 NKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGVKPPEVI- 194

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               +V ++F S N    MHVGH R  ++G++L  L+ F  ++V R  ++ D G Q   L
Sbjct: 195 --KKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGML 252

Query: 178 ALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              +  R+   L  +   SDL   Y          +E   +  S +++  +     I   
Sbjct: 253 IAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSI--- 309

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            + + +  + R + + +  + DI + E    F++   S +  +++ L  +G +       
Sbjct: 310 KAWELICNVSRKEFQTIYERLDISVKERGESFYQ---SRMLSVVEYLRGKGLL------- 359

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNM 352
                  + D  R+ +    T  G  +   ++KSDG +TY  +D+A  + + E    D +
Sbjct: 360 -------EVDEGREIMWPDDTKTG--IPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWI 410

Query: 353 IYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           IYV+ S  S +   +   A     ++    +++ +    V L  DG   K   R+GD + 
Sbjct: 411 IYVVDSGQSTHFNTIFKAAERSAILNPLSHRVDHV-QFGVVLGEDGK--KFKTRSGDTVK 467

Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                             +    +++  L         F F 
Sbjct: 468 LSDLLDEGMKRSLQQLESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFSFD 527

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           K+ E  + N   Y+ Y Y R  SI R + + F +L   L   N++         E +L  
Sbjct: 528 KMLE-DRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIV----LDHEKEWKLAK 582

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L +   ++   +     + L  + +++ +VF   +       + +  Q +   +   R+
Sbjct: 583 TLLKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNK--QGDIIGVNHSRI 640

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A A+++     I+G++  ++M
Sbjct: 641 LLCEATAAVLRQCFYILGLKPVSKM 665


>gi|332523559|ref|ZP_08399811.1| arginine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314823|gb|EGJ27808.1| arginine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 562

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 132/612 (21%), Positives = 246/612 (40%), Gaps = 83/612 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S + + + ++  ++  E       ++E P++   G ++      L++ L   P  IA
Sbjct: 2   DTKSLIASEIAKVVPELNQETIYN---LLETPKNSDMGDIAFP-TFSLAKVLRKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I      + V   G  +IN +L  + + K  L +++    +YG+  IG G  + 
Sbjct: 58  AELAEKID-SSQFEKVMAVGP-YINFFLDKTTISKNVLHAVIEEKSDYGQQHIGDGQNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           ++  S N   P  VGH R  V+ D +  + +  GY   R  ++ D G Q   L ++   W
Sbjct: 116 LDMSSPNIAKPFSVGHLRSTVIADAIGHIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             Q A+  N  D     Y  +  +       D+ + +    L   +++   + + +  ++
Sbjct: 176 GDQAAIEANPIDELLKLYVRINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDES 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  R     L++  D F  E  ++      + + I  L  +  + E       SK  Q
Sbjct: 236 LVEFNRI-YDKLDVTFDYFHGEAFYN----DKMDEGIQILEDKHLLKE-------SKGAQ 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
             D+++            D+   L+ KSDG+  Y   D+A    +     F   IYV+G 
Sbjct: 284 IVDLEKY-----------DLPPALIKKSDGATLYITRDMATAMYRQRTFNFVKNIYVVGQ 332

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           + S + K+L+AV   +    A  N++      + ++    K+S R G+ I L   +DE  
Sbjct: 333 EQSHHFKQLKAVLKEMGFDWAD-NMIHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAV 389

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V+F  L        DFD   +     E    Y
Sbjct: 390 ARALTQIESKNPDLENKEAVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGE-TGPY 448

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY YAR +SI R+A           F   +    S  D    ++I  L  +   I+ A 
Sbjct: 449 VQYTYARIQSILRKAN----------FTPEINKDYSLNDDESWEIIKLLQSFATNIQRAA 498

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P  +A +   LA  F+ +++H R       +  ++      RL L ++ A ++   
Sbjct: 499 DKYDPSIIAKFAIQLAQAFNKYYAHTR------ILDESDE--RDSRLALCYSTAVVLKES 550

Query: 574 LNIIGVESPNEM 585
           L ++GV++P +M
Sbjct: 551 LRLLGVQAPEKM 562


>gi|306828746|ref|ZP_07461938.1| arginine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428924|gb|EFM32012.1| arginine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 562

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 129/619 (20%), Positives = 240/619 (38%), Gaps = 91/619 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +  L + +  +D +           ++E+P++   G ++   A  L++     
Sbjct: 1   MNTKKLIAGELASVIDSLDQEAIFN-------LLEQPKNSDMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGK 119
           P  IA  I A+I      + V   G  ++N +L  S +   ++  I+  G +Y +   G+
Sbjct: 53  PQVIAADIAAKIN-SQAFEKVVATGP-YVNFFLDKSAISGAVIKEIIKKGADYAQQTEGQ 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + I+  S N   P  VGH R  V+GD L+++    GY+  +  ++ D G Q   L +
Sbjct: 111 EQNITIDLSSPNIAKPFSVGHLRSTVIGDALSNIFKKMGYKTIKINHLGDWGKQFGLLMV 170

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +   W  ++A+  N    P      +Y++      A+  + + L+     W   ++D   
Sbjct: 171 AYKKWGSKEAIEAN----PIDELLKLYVR----INAEIETDKALDDEGRLWFKKLEDGDP 222

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
            + Q       + L   N  + +   E D   G+      + + +  L  +G + E    
Sbjct: 223 EATQLWQWFRDESLVEFNRIYKLLGVEFDSLNGEAFYNDKMDEAVQILEEKGLLEES--- 279

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                        +   +       D     + KSDG+  Y   D+A    +     F  
Sbjct: 280 -------------QGACIVNLDDF-DLPPAMIKKSDGATLYITRDIATAIYRARTYNFVK 325

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IY +G + S + K+L+AV   +    +  +++  +   + ++    K+S R G+ I   
Sbjct: 326 NIYAVGQEQSNHFKQLKAVLKKMGFAWSD-DMVHVDFGLVTKN--RQKLSTRKGNIILLE 382

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     +   VG  +V+F  L        DFD   +    
Sbjct: 383 PTLQEAITRAKAQIEAKNPDLENKDQIAQAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFE 442

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    Y+QYAYAR +S+ R+A           F  N     S  D+   ++I  L ++ 
Sbjct: 443 GE-TGPYIQYAYARIQSLLRKAD----------FQPNAQESYSLNDSESWEIIKLLQDFA 491

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           RVI+ A+   +P  +A Y   LA  F+ +++H R          +       RL L +A 
Sbjct: 492 RVIKRASDNYDPSLIAKYAISLAQAFNKYYAHTRIL--------DESPERDSRLALSYAT 543

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GVE+P +M
Sbjct: 544 AVVLKEALRLLGVEAPEKM 562


>gi|73953494|ref|XP_866938.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 4 [Canis
           familiaris]
          Length = 597

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 123/570 (21%), Positives = 244/570 (42%), Gaps = 68/570 (11%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M+ ++   ++P  IAE I   +  +  V+ V IAG GFIN++L   ++ + L++++V+G+
Sbjct: 61  MLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDFVSQQLTNLLVNGV 120

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +     +G+  KV ++F S N    MHVGH R  ++G+++  L  F+GY+V R  ++ D 
Sbjct: 121 QLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDW 178

Query: 171 GAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G Q   L   +  ++   L       DL + +Y     +   +E   K + + +   + K
Sbjct: 179 GTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSK 237

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYV 286
              I+K  + + +  + R +   +    DI + E    F++     + D++     +G+V
Sbjct: 238 NPDIIK--AWKLICDVSRQEFNKIYDALDISLIERGESFYQ---DRMNDVVKEFEDKGFV 292

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-Y 345
                             D ++++F   + G  V   ++KSDG YTY  +DLA  K + +
Sbjct: 293 QVD---------------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAALKQRLF 334

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           E   D +IYV+ +  S + + +   A  +     ++  +      +       K   R+G
Sbjct: 335 EEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSG 394

Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436
           + + L  +++E                             V    +++  L         
Sbjct: 395 ETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYI 454

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSE 495
           F F K+ +  + N   Y+ YA+ R RSI R A     +++ ++  +     +   D   E
Sbjct: 455 FSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQETKIVLDHEKE 508

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L   +  +P +++        + L  Y+Y+LA+ F   +       + R       K+
Sbjct: 509 WKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGQVLKV 567

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            M R+ L  AVA+I+    +I+G++    M
Sbjct: 568 NMWRMLLCEAVAAIMAKAFDILGIKPVQRM 597


>gi|171912424|ref|ZP_02927894.1| arginyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 588

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 132/617 (21%), Positives = 233/617 (37%), Gaps = 70/617 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-----GLDP 61
           +   L   L        +       I +    D   G   +NAAM  ++ L      ++P
Sbjct: 4   YRQLLTERLLAAFVTAGISPPDGLVIEVTNASDSRFGDYQSNAAMTAAKLLSTKEQKINP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A  +V  + +    +   IAG GF+N  L+   L+  LSS++      G   +    
Sbjct: 64  RAMATQLVEAMDVTGLCEKPEIAGPGFLNFRLTKEALQGALSSLITD-ERLGVPAVDAAK 122

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + ++F + N   PMHVGH R   +GD+L  +   +G+ V  + ++ D G Q   +    
Sbjct: 123 TIVVDFSAPNVAKPMHVGHIRSTFIGDSLTRIARLAGHNVVTDNHVGDWGTQFGMIIHGW 182

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-------LLNFPEEKWLPIVK 234
             R  Q     D   P      VY +      AD+   E        L   + + L I K
Sbjct: 183 KTRLNQDALKED---PIHELVRVYREINAATKADESVLETCKTELVKLQQGDAENLAIWK 239

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +  V+  +  + D    L IQ D ++ E  ++      + D++     +  + EG     
Sbjct: 240 E-CVKLTLDQLHDIYGRLGIQFDHYLGESYYNDALAPLVEDMLTKGQAR--ISEGAACVF 296

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMI 353
                +    +    L             + KSDG + Y   DLA    +  E   D + 
Sbjct: 297 SDGVKKP---EEDPFLINRDGQWTPAPCIVRKSDGGFLYATTDLATIDHRVIEWKADEIW 353

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+G+    + +++   A         +++    +  L  DG   K   R+G+ + L  V
Sbjct: 354 YVVGAPQQLHFRQVFEAAHRRGHSTRMVHIAFGSI--LGPDGKMFK--TRSGESVGLLEV 409

Query: 414 VDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +DE                         +G  +V++  L +       F + K+    + 
Sbjct: 410 IDEAIERARAVVEEREFSDDDKAKIASVIGIAAVKYAELSQHRMTDYKFAWEKMLSF-QG 468

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+  AY R R+IFR+                + P+ S  + +E QL + LA++   
Sbjct: 469 NTAPYLLNAYVRTRAIFRKLDGEVK----------LAPEVSFTEDAERQLALKLAQFGEA 518

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +      P  LA YLY+LA  +H  +      P LR    +       RL L    + 
Sbjct: 519 VHDVLEDFRPNLLAQYLYELAGYYHTFYEAC---PVLR----SEGVTRNTRLVLADTTSR 571

Query: 569 IINSGLNIIGVESPNEM 585
           ++ SGL ++G+E+ + M
Sbjct: 572 VLKSGLGLLGIETTDRM 588


>gi|152988976|ref|YP_001351107.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166232823|sp|A6VDH2|SYR_PSEA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150964134|gb|ABR86159.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 587

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 119/604 (19%), Positives = 221/604 (36%), Gaps = 78/604 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L ++     +   +   I +E  +D +HG  ++N AM+L++P G+ P  +A 
Sbjct: 5   IRQLIQQALDQLTADGTLPAGLTPDIQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAT 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  +     +  V IAG GF+N +    +L   L   +      G    G   +V I+
Sbjct: 65  RLVEALPAHEQLAKVEIAGPGFLNFFQDHIWLAASLDRALAD-ERLGVRKAGPAQRVVID 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L   +  +  
Sbjct: 124 LSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDTVIRQNHVGDWGTQFGMLLAYLEEQPV 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKI 244
            A      DL   Y           E AD+    ++     +   L +   ++  ++   
Sbjct: 184 DA-QAELHDLEVFYRAAKKRFDESPEFADRARELVVRLQAGDPDCLRLWTRFNEISLSHC 242

Query: 245 IRDDLKALNIQHDI--FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +     L ++  +     E  ++      +  ++ +L  +G + E              
Sbjct: 243 QKV-YDRLGVKLSMADVKGESAYN----DDLAQVVADLTAKGLLTE-------DNGALCV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361
            ++     FR    G+ +   + K+ G Y Y   DLA  + ++     D  +Y +    +
Sbjct: 291 FLEE----FR-NAEGNPLPVIVQKAGGGYLYATTDLAAMRYRHNVLHADRALYFVDQRQA 345

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + +++  VA       A + +       +   DG P K   R G  + L  +++E    
Sbjct: 346 LHFQQVFEVARRAGFVPADMELEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLEEAESR 403

Query: 417 -------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                          VG DSV++  L +  +    F+F  +   
Sbjct: 404 AYALVKERNEQRVERGEEPFDEAQLREIGRVVGIDSVKYADLSKHRTSDYSFNFELMLSF 463

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YA  R  S+FR+       L   +               EL L   LA++
Sbjct: 464 -EGNTAPYLLYACTRVASVFRKLGQGREQLGGRIV---------LEQPQELALAAQLAQF 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             ++ N  +   P+ L  YLY+LA +F   + H         + A +      RL+L   
Sbjct: 514 GDLLNNVALKGVPHLLCAYLYELAGLFSSFYEHC------PILTAEDPAQKDSRLRLAAL 567

Query: 566 VASI 569
               
Sbjct: 568 TGRT 571


>gi|218903314|ref|YP_002451148.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218537001|gb|ACK89399.1| arginyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 562

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N+Y +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDHSWNVLKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|300118117|ref|ZP_07055865.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724428|gb|EFI65122.1| arginyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 562

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLYNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFAKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K     L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDGELEEDGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALIVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A +F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQLFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|213647449|ref|ZP_03377502.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213857447|ref|ZP_03384418.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289824037|ref|ZP_06543635.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 516

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 118/547 (21%), Positives = 210/547 (38%), Gaps = 66/547 (12%)

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            + +      V IAG GFIN++L P++L + +   + S              + +++ + 
Sbjct: 4   HLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALTSDRLGVSQPTR--QTIVVDYSAP 61

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   +  + Q+   
Sbjct: 62  NVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAG 121

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           +      EG+Y            A K+  E   F E     +VK  S     + +   L 
Sbjct: 122 DMALADLEGFYRD----------AKKHYDEDETFAERARNYVVKLQSGDTYFREMWRKLV 171

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            + +  +       + R + +  RD +   +    +  GI+   K+K     + +   ++
Sbjct: 172 DITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA-VESEGATVV 226

Query: 311 FRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKR 366
           F        GD +   + K DG Y Y   D+A  K +YE    D ++Y + S    ++ +
Sbjct: 227 FLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQ 286

Query: 367 LEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
              +          + +      + L +DG P K   R G  + L  ++DE         
Sbjct: 287 AWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK--TRTGGTVKLADLLDEALERARRLV 344

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             VG  +V++  L +  +    FD+  +    + N   Y+QYAY
Sbjct: 345 AEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAY 403

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R  S+FR+A     D+D        +      +  E QL   L ++   +        P
Sbjct: 404 TRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEETLTVVAREGTP 455

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           + +  YLYD+A +F G + H         + A N  +   RL+L    A  +  GL+ +G
Sbjct: 456 HVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAKTLKLGLDTLG 509

Query: 579 VESPNEM 585
           +E+   M
Sbjct: 510 IETVERM 516


>gi|326793312|ref|YP_004311133.1| arginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544076|gb|ADZ85935.1| arginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 571

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 130/616 (21%), Positives = 243/616 (39%), Gaps = 79/616 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDP 61
             DF   L   L       K++   ++ I  +IE P + A G  +      L++ L   P
Sbjct: 1   MKDFKLELAKLL-----NTKIDTLSVEEIYGMIEVPNNVAMGDYAF-PCFKLAKALRKAP 54

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKG 120
             IA+ IV  +     ++        +IN +L+ S ++++IL +++     YG       
Sbjct: 55  PMIAKDIVDTLGEIDFIEKAENVNA-YINFFLNRSVFVKEILLAVLADRESYGLAKEKNK 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N   P HVGH R  V+G++L  +    GY      ++ D G Q   L ++
Sbjct: 114 GNVVVDYSSPNIAKPFHVGHLRSTVIGNSLYHIFEALGYNCIGVNHLGDWGTQFGKLIVA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-----LLNFPEEKWLPIVKD 235
            + +Y       +  + E     V      KE  +           +   +E+ L + K 
Sbjct: 174 -YKKYSSKEEVEEKGISELLRIYVLFHDEAKEHPEMDQEARNYFTKMEQGDEEALALWKW 232

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   ++ +  R   K L +  D +  E  ++      +  +I +L  +G +         
Sbjct: 233 FKEVSLNEFERV-YKMLGVTFDSYNGEAFYN----DKMDAVIKDLEDKGLI-------EI 280

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           S+  +   +D + +              + K+DGS  Y   D+   K + E   F   IY
Sbjct: 281 SEGAKIVRLDEENM----------APCLITKNDGSSLYATRDITAAKYRKETYEFKKCIY 330

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V     + +  +   V   +    A+  V +   +     G   K+S R+G+ I L  ++
Sbjct: 331 VTALQQNLHFAQWFKVIEKMEWDWAKDLVHVPFGMVSMEGGA--KLSTRSGNVIFLEDIL 388

Query: 415 DE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            E                         VG  +V F  ++    + + F + +V +   E 
Sbjct: 389 KEAVDKTKKIIEEKNPDLDNKDEVANQVGIGAVIFDDMYNNIIKDIQFSWERVLDFQGE- 447

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQY +AR  S+ ++A      LD D  P   I + +  D + L +   LA++  VI
Sbjct: 448 TGPYVQYTHARACSLLKKAG-----LDIDNLPDLEISESAIADDTVLAVAKELADFKNVI 502

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E+A    EP  +A Y  DLA  F+  ++        + +   +  +   RL +V A    
Sbjct: 503 ESAAANFEPSYIARYAVDLAQAFNKFYNE-------QPILVGDEAVKNSRLAVVIATKYT 555

Query: 570 INSGLNIIGVESPNEM 585
           I + L+++G+++P +M
Sbjct: 556 IKNALHLLGIKAPVQM 571


>gi|296109097|ref|YP_003616046.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433911|gb|ADG13082.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 552

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/603 (25%), Positives = 257/603 (42%), Gaps = 79/603 (13%)

Query: 11  LKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +K  +KE   K  +EK  +D  + ++ P     G  S N A  L++ L  +P  IAE +V
Sbjct: 1   MKEIIKEEVKKKILEKFNVDIEVNVDEPPKIEMGDFSVNVAFRLAKELKRNPKEIAEELV 60

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             +K++   +   +   G+IN YL    Y R+++  I+    +YGR    K  K+ +E  
Sbjct: 61  KDLKVEGVKEIKVV--NGYINFYLDYEIYGRQVIGEILEKKSDYGRGE--KKEKIILEHT 116

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANP GP+H+GH R A++GD L  ++ F GYEV   YY+ND G Q+  +   +       
Sbjct: 117 SANPNGPLHIGHLRNAIIGDCLKRILEFYGYEVETHYYVNDMGRQMALVVYGIEKFGLDK 176

Query: 189 LYNNDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               D  + E Y          K       EL   Y   L    E +      +++V   
Sbjct: 177 EKKKDHAIAEVYVKINKYLEEHKEEEEKISELMKLYEESLEKNEENEITKKF-EFAVNYA 235

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++ I++ LK L+I+HD F+ E  + R     ++++I  L   G V               
Sbjct: 236 LEGIKETLKNLDIEHDKFVWESSYVRN--GLVKEVIKRLMETGKV--------------- 278

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +     L      G +    L +S+G+  Y   D+AY   K  R  D +I V+G+DH 
Sbjct: 279 --IKEDTYLLSLEDFGIEKKMVLARSNGTSLYSTRDIAYHLDKL-RNADIVIDVLGADHK 335

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
              + ++A    +  +K +  ++  E + L        MS R G FI+   +++E     
Sbjct: 336 LTAEMVKAALKLLGCEK-EPEIVFYEFISLPEG----SMSTRKGRFISADELLEEALKRA 390

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         +   SVRF +      + L F + +  +  K      +QYA+ R  
Sbjct: 391 KEECEKRNVSVERDIALGSVRFNIAKVSPEKPLIFRWEEALDFEKVGC-PLIQYAHVRAS 449

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A D              +      +  E +LI  L ++  VI+ +   +  + LA
Sbjct: 450 SILREAND-----------SESLNFSYNLEKEEKELIKMLDKFKEVIKESAEKRRVHILA 498

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL +LA  F+  +      P L+       +    RL LV A   +I +GLN++G+++P
Sbjct: 499 NYLIELAKKFNKFYEKC---PILK------SEYKRERLALVKATKIVIKNGLNLLGIKAP 549

Query: 583 NEM 585
             M
Sbjct: 550 ERM 552


>gi|254721052|ref|ZP_05182843.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 562

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETYTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|225864159|ref|YP_002749537.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229184415|ref|ZP_04311622.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|225790718|gb|ACO30935.1| arginine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228599211|gb|EEK56824.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 562

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGVP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|1217668|gb|AAB35627.1| arginyl-tRNA synthetase [Homo sapiens]
          Length = 659

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 127/620 (20%), Positives = 251/620 (40%), Gaps = 79/620 (12%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL-- 59
            + +       + +K     ++        +++   +    G    N+AM +S+ L    
Sbjct: 75  NIISRLQEVFGHAIKAAYPDLENPP-----LLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129

Query: 60  ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P   AE I   +     +  V  AG GFIN +L   ++ + L+S++V+G++     
Sbjct: 130 PEVNPGEFAENITKHLPAMDVLKRVEFAGPGFINGHLRKDFVSEQLTSLLVNGVQLP--A 187

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +G+  KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   
Sbjct: 188 LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGM 247

Query: 177 LALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++   L       DL   +Y     +   +E   K + + +   + K   I K
Sbjct: 248 LIAHLQDKFPDYLTVSPPIGDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK 306

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            Y +  M  + R +L  +    D+ + E    F++     + DI+     +G+V      
Sbjct: 307 AYLL--MSDVSRQELNKIYDALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVD--- 358

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D 
Sbjct: 359 ------------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADM 403

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +IYV+ +  S + + + A A  +     ++  +      +       K   R+G+ + L 
Sbjct: 404 IIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLM 463

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             V    +++  L         F F K+
Sbjct: 464 DLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKM 523

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVH 501
            +  + N   Y+ YA+ R RSI R A     ++D ++  +     +       E +L   
Sbjct: 524 LD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLVHEKEWKLGRC 577

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +  +P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ 
Sbjct: 578 ILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRI- 635

Query: 562 LVHAVASIINSGLNIIGVES 581
           L   VA+++  G + +G++ 
Sbjct: 636 LCETVAAVMAKGFDTLGIKP 655


>gi|229196421|ref|ZP_04323168.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228587058|gb|EEK45129.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 595

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 35  DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 92  KEVAQKL-SDPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 149

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 206

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 207 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 262

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 263 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 313

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 314 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 365

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 366 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 422

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 423 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 481

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 482 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWNIVKLLNKFPKVIEAA 530

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 531 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 582

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 583 GLRLLGVEAPEEM 595


>gi|307104781|gb|EFN53033.1| hypothetical protein CHLNCDRAFT_26194 [Chlorella variabilis]
          Length = 601

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 121/604 (20%), Positives = 232/604 (38%), Gaps = 66/604 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG---- 58
           L    ++  +  L      +  E  I     +    +   G    N AM L   L     
Sbjct: 37  LRQRLAAAFQQSLDAAFPSMAGEPAI-----VNPCNNPKFGDYQCNNAMGLHGKLKGQPD 91

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +AE +VA +     V    +AG GFIN+ +SP +L   L++++  GI      
Sbjct: 92  APKNPRAVAEALVAHLPETGMVAETSLAGPGFINIRISPDWLASHLTTMLRQGISTWAPA 151

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
              G +V ++F S N    MHVGH R  ++GDTLA  + F G +V R  +I D G Q   
Sbjct: 152 GYAGRRVVVDFSSPNVAKEMHVGHLRSTIIGDTLAHTLEFCGADVLRLNHIGDWGTQFGM 211

Query: 177 LALSVFWRYQQAL---YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           L   +  +  + L    + D    +  Y     +   +E   + + E +   +      +
Sbjct: 212 LIQYIAEKRPEGLNAASDEDVQDLQVLYRAAKQRFDEEEAFKQRAREAVTELQGGRPEYL 271

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +  + Q +    R + + +  +  + + E      +P  ++ ++D+L ++G   E     
Sbjct: 272 QACAWQRICDASRREFQKIYDRLGVQLQERGESFYNP-MLKPVVDDLMQRGIAEES---- 326

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
                      D  + +F   + G  +   + KSDG + Y + D+A  K + E    D +
Sbjct: 327 -----------DGAKCVF---VEGAQIPLIVQKSDGGFGYASTDMAAVKHRIETEKADWI 372

Query: 353 IYVMGSDHSGYV------------KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           IYV     S +                         +   + V L EL+   +  +   +
Sbjct: 373 IYVTDMGQSSHFDLVGGGGRGHGGGGGGGDGKKFRSRSGDV-VRLVELLDEAKQRIVDTV 431

Query: 401 SKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            +R  D     +  +   +G  +V++  L    +    F +  +  Q + N   Y  YA+
Sbjct: 432 KERRPDATPEEIEEMAAAMGYGAVKYADLKNHRTTNYKFSYDDMLSQ-QGNTAVYQLYAH 490

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI R++         D+       +       E+ L + +A +   ++       P
Sbjct: 491 ARIASIVRKSG-------RDVSELAKTARVVLGHEKEVALALQIARFSDAVDECLAELLP 543

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++  YLYDL++ F+  ++  +       V  +  +    RL L  A A  + +   ++G
Sbjct: 544 HRITEYLYDLSTAFNQFYTECQ-------VVGSPEE--DSRLLLCEATALTMRTCFQLLG 594

Query: 579 VESP 582
           ++  
Sbjct: 595 IQVL 598


>gi|118477608|ref|YP_894759.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118416833|gb|ABK85252.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 562

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|256810399|ref|YP_003127768.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793599|gb|ACV24268.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 566

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 144/609 (23%), Positives = 258/609 (42%), Gaps = 73/609 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + + N LK++  + ++ K +   I +++  +   G  S N    L++ L  +P  IA
Sbjct: 2   DVKNNIINALKKVIYE-EIGKGV--EIKLDKTPNLELGDYSVNICFRLAKELKKNPKVIA 58

Query: 66  ELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E IV ++K         I A  G+IN Y+  +   K L   +            KG K+ 
Sbjct: 59  EEIVEKLKAMNIEGIKEIKAVNGYINFYIDYNKFAKNLVEEIDKKGNNYGKGDKKGVKII 118

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E  SANP GP+H+GH R A++GD L  ++ F GY+V   YY+ND G Q+  +   +   
Sbjct: 119 LEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQMALVVYGIELF 178

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYS 237
                   D  + E Y                  EL  +Y   L    + + +    +++
Sbjct: 179 GLDKEKKKDHAIAETYVKINKYLEEHPEEEEKILELMREYEDALEKNEDNEVVKKF-EFA 237

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +  I++ L  LNI+HD F+ E  + R     +++++  L   G V           
Sbjct: 238 VNYALDGIKETLNNLNIKHDTFVWESTYVRN--GMVKEVLKRLMETGKV----------- 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 +  +  +   +  G      L +++G+  Y   D+AY   K  +  D  I V+G
Sbjct: 285 ------VKEETYMLDLSDFGIQKKMVLARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLG 337

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +DH    + ++A    +  K     V+  E + L        MS R G FI+   +++E 
Sbjct: 338 ADHKLTAEMVKAALKLLGSKVP--EVIFYEFISLPEG----SMSTRRGRFISTDELLEEA 391

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G  +VR+ +      + + F + +  +  K    F +QY
Sbjct: 392 IKRAKEECKKRWVEEEIAKDIGLGAVRYNIARISPEKPMIFKWEEALDFEKVGCPF-IQY 450

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+ARC SI ++A+            ++    + E    E +LI  L E+  +I+ +   +
Sbjct: 451 AHARCCSILKEAEKKGV--------KDEALFDYELTNEEKELIKMLDEFKDMIKESAENR 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           + + LA YL +LA VF+  +++    P L     +N  +   RL+LV +  ++I  GL +
Sbjct: 503 KVHVLANYLLELAKVFNRFYANC---PILMTKVDDN--IKKSRLKLVKSTKAVIEIGLGL 557

Query: 577 IGVESPNEM 585
           +G+  P  M
Sbjct: 558 LGINCPGRM 566


>gi|118790236|ref|XP_318119.3| AGAP004708-PA [Anopheles gambiae str. PEST]
 gi|116122419|gb|EAA13294.3| AGAP004708-PA [Anopheles gambiae str. PEST]
          Length = 663

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 132/625 (21%), Positives = 258/625 (41%), Gaps = 84/625 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--- 59
           +  +        +++    + VE       VI        G    N+AM +++ L     
Sbjct: 79  IVGELQQVFTEAIQKAFPSVLVEA------VITISSSPKFGDYQCNSAMQIAQHLKQLSV 132

Query: 60  --DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              P  +A+ +VA + K  P VD + IAG G++N++LS SY  + + SI+  GI      
Sbjct: 133 KSSPREVAQKLVAELQKPIPCVDRLEIAGAGYVNIFLSRSYGEQRIMSILRHGI---VVP 189

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           + +  +V ++F S N    MHVGH R  ++GD++   + + G++V R  +I D G Q   
Sbjct: 190 LIEKKRVIVDFSSPNVAKEMHVGHLRSTIIGDSICRFLEYLGHDVLRINHIGDWGTQFGM 249

Query: 177 LALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  R+   Q      SDL + +Y    ++    E+  K + E +   +   L  +K
Sbjct: 250 LIAHLQDRFPNFQTESPPISDL-QAFYKESKVRFDSDEVFKKRAYECVVKLQSGELSYLK 308

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +   +  + R + + +  + D+ + E    F++   S +  I++ L + G++ E    
Sbjct: 309 --AWNLICDVSRKEFQTIYNRLDVKLVERGESFYQ---SRMEKIVEELKQDGFLEED--- 360

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                       + + +++     G  +   ++KSDG +TY  +D+A  K +  E   D 
Sbjct: 361 ------------EGRLIMWGENRAG--IPLTIVKSDGGFTYDTSDMAAIKQRLQEEKADW 406

Query: 352 MIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +IYV  +  + + + + + A     + E K +++ +    V L  DG   K   R+GD +
Sbjct: 407 LIYVTDAGQATHFQTIFSCAKRAKILQESKHRVDHV-GFGVVLGEDGK--KFKTRSGDTV 463

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L  +++E                             V    +++  L    +    F F
Sbjct: 464 KLTELLNEGLRRAMEKLVQKERNLVLTQEELVAAQESVAYGCIKYADLSHNRNNEYVFSF 523

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            K+ E  K N   Y+ YAY R RSI R+    F +    +    VI  + E    E +L 
Sbjct: 524 DKMLE-DKGNTAVYLLYAYTRIRSIARKCGGDFANDMQKVIDSTVIKLDHE---KEWKLA 579

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L  +  V+         + L  ++Y++ + F   +       + +  Q     +   R
Sbjct: 580 KVLLRFTDVMLLIMKNLSLHHLCEFVYEICTAFSEFYDSCYCIEKNK--QGEIITVYPSR 637

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           + L  A + ++    +I+G++  ++
Sbjct: 638 VLLCEATSKVLEKCFDILGLKPVHK 662


>gi|320010139|gb|ADW04989.1| arginyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 589

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 133/623 (21%), Positives = 226/623 (36%), Gaps = 74/623 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L+  L +       +    D ++    R         N  + L++ L  +
Sbjct: 1   MASVPSLASTLQQQLADALTAALPDAGTADPLL----RRSDRADFQANGILALAKKLKGN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  + A +     +  + ++G GF+N+ L+   +   L++    G   G       
Sbjct: 57  PRELASQVTAALPAGDLIKDIEVSGPGFLNVTLTDRAIITTLAARAADGDRLGVPPKAAP 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I++   N    MHVGH R AV+GD +  ++ F+G  V R ++I D G Q   L   
Sbjct: 117 GTTVIDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGENVVRRHHIGDWGTQFGMLIQY 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +F    +  +  D    E              L   Y +  + F  ++         V A
Sbjct: 177 LFEHPDELRHGGDQADGEAA---------MSSLNRVYKASRVLFDSDEEFKARSRDRVVA 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP-SPIRDIIDN---LARQGY--VYEGILPPP 294
           +     + L         F+ E   +       +   ID+   +   GY  + E      
Sbjct: 228 LQAGDPETLA----HWQRFVDESKIYFYSVFDKLDMEIDDPDIIGESGYNDMLEETCRIL 283

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDN 351
           +             + F      D    PL+  K++G Y Y A DL+  + +      D 
Sbjct: 284 EETGVAVRSEGALCVFFDDVKGPDGNPVPLIVKKTNGGYGYAATDLSAIRDRVRNLKADT 343

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++YV+ +  S + K +   A         +    L     L +DG P K   R G  + L
Sbjct: 344 LLYVVDARQSLHFKMVFETARRAGWLNDDVKAHQLAFGTVLGKDGKPFK--TREGTTVRL 401

Query: 411 RHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             ++DE                             VG  +V++  L         FD  +
Sbjct: 402 EDLLDEAVERATAVVREKAEKVGLSEEEIVENGRYVGVGAVKYADLSTSAVRDYKFDLDQ 461

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +   + +  V Y+QYAYAR RSI R+A D  P              E +   +E  L +H
Sbjct: 462 MVSLNGDTSV-YLQYAYARIRSILRKAGDAKP----------AAHPELDLAPAERALGLH 510

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L ++  V+E      EP+KLA YLY LAS     +   +          N  ++   RL 
Sbjct: 511 LDQFGAVLEEVAEGYEPHKLAAYLYQLASHLTTFYDQCQVLS-----DENPAEVVENRLF 565

Query: 562 LVHAVASIINSGLNIIGVESPNE 584
           LV   A  ++ G+ ++G+ +P  
Sbjct: 566 LVELTARTLHQGMKLLGIRTPER 588


>gi|157412544|ref|YP_001483410.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157387119|gb|ABV49824.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 604

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 128/632 (20%), Positives = 229/632 (36%), Gaps = 84/632 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L   F   L + L++ D K + E  IL + +I +      G    N  + LS+    +P 
Sbjct: 8   LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65

Query: 63  TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKIL---SSIVVSGIEYGRN 115
            I+   +  +  +        S+ IAG GFIN+ L  + L   +        +GI   + 
Sbjct: 66  DISNDFINLLNKNKSISKLCKSLEIAGPGFINIKLKDAVLINEIKANIQCNRAGIPLIKK 125

Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            +  G   KV ++F S N    MHVGH R  ++GD+++ +    GYEV R  ++ D G Q
Sbjct: 126 DLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185

Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              L   +   Y   L        SDL E Y           E   +   E++   +   
Sbjct: 186 FGMLITQLKDLYSNDLEEIGKIKISDLVEFYKESKKRFDNESEFQKRSREEVVKL-QSGD 244

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +  +K  + + +    R +   +     I I E      +P  ++ +ID+L  +  + E 
Sbjct: 245 IKSIK--AWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNP-FLKSLIDDLNLKKILVE- 300

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-- 347
                  +  +   +D       +   G  +   + K DG + Y   DLA  + ++ +  
Sbjct: 301 ------DQGAKCVFLDG-----MTNKEGKPLPLIIQKKDGGFNYATTDLAAIRYRFNQPP 349

Query: 348 ---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                  +IYV     + +   +  VA           V       L +     K+  R 
Sbjct: 350 NGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPENRQVDHVPFG-LVQGIDGKKLKTRE 408

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           G+ I L+ +++E                               +G  +V++  L +    
Sbjct: 409 GETIRLKDLLNEAVRRAKEDLLKRLKDEDRYETEEFIANTSRIIGLGAVKYADLSQNRIT 468

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+      N   Y+ Y   R   I R+   ++   D                 
Sbjct: 469 NYQFSFDKMLSL-NGNTAPYLLYTLVRILGIKRKNDFVYDSKDLQYINYE--------HK 519

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +LI  L ++  VI +      P +L  YL++L   F+  +    + P L+      +
Sbjct: 520 SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYD---QVPILK----EEK 572

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + + RL L    A  +   L ++G+E+   M
Sbjct: 573 YIKISRLNLCDLTAKTLKLSLELLGIETLERM 604


>gi|229138910|ref|ZP_04267489.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|228644535|gb|EEL00788.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 595

 Score =  385 bits (990), Expect = e-104,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 35  DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 92  KEVAQKL-SDPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 149

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 206

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 207 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 262

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 263 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 313

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 314 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 365

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 366 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 422

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 423 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 481

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 482 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 530

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ +      +R +  N       RL LV+AV  ++  
Sbjct: 531 FNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAE--KDSRLALVYAVTVVLKE 582

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 583 GLRLLGVEAPEEM 595


>gi|324326226|gb|ADY21486.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 562

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 136/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYEKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRETVSDEVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             +A+   D   P      +Y++   +   D+     L      W   ++   + +V+  
Sbjct: 177 GNEAVVKED---PIRELFKLYVQFHEEVKVDEE----LEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV++P EM
Sbjct: 550 GLRLLGVDAPEEM 562


>gi|195553723|ref|XP_002076727.1| GD24677 [Drosophila simulans]
 gi|194202717|gb|EDX16293.1| GD24677 [Drosophila simulans]
          Length = 665

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/588 (20%), Positives = 236/588 (40%), Gaps = 77/588 (13%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
              G    N AM LS+ L        P  IA  +       P ++ + IAG GF+N++LS
Sbjct: 113 AKFGDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLS 172

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y    LS+++ +G+     +     +V ++F S N    MHVGH R  ++G++L  L+
Sbjct: 173 KDYASSALSNLLRNGVTPPEVI---KKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLL 229

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E
Sbjct: 230 EFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEE 289

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +  S +++  +     I    + + +  + R + + +  + DI + E    F++   
Sbjct: 290 FKKRAYSRVVSLQKGVPNSI---KAWELICNVSRKEFQTIYERLDISVKERGESFYQ--- 343

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  +++ L  +G +              + D  R+ +    T  G  +   ++KSDG 
Sbjct: 344 SRMLSVVEYLRGKGLL--------------EVDEGREIMWPDDTKTG--IPLTIVKSDGG 387

Query: 331 YTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLC 386
           +TY  +D+A  + + E    D +IYV+ S  S +   +   A     ++    +++ +  
Sbjct: 388 FTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLSHRVDHV-Q 446

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             V L  DG   K   R+GD + L  ++DE                             +
Sbjct: 447 FGVVLGEDGK--KFKTRSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELKDAQESL 504

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +++  L         F F K+ E  + N   Y+ Y Y R  SI R + + F +L  
Sbjct: 505 AYGCIKYSDLCHNRISDYIFSFDKMLE-DRGNTAVYLLYTYTRICSIARNSGEDFTNLPE 563

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L   N++         E +L   L +   ++   +     + L  + +++ +VF   + 
Sbjct: 564 ILKKTNIV----LAHEKEWKLAKTLLKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYD 619

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +  Q +   +   R+ +  A A+++     I+G++  ++M
Sbjct: 620 SCYCIEKNK--QGDIIAVNHSRILMCEATAAVLRQCFYILGLKPVSKM 665


>gi|168214506|ref|ZP_02640131.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714040|gb|EDT26222.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 565

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 242/615 (39%), Gaps = 86/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++   ++ + I+S ++  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLGP-YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             ++AL     + P      +Y+K         EL D+           +++ + + + +
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L +  D +  E  ++      +  +++ L +   + E       S
Sbjct: 231 K-DLSLKEFNKIYDMLGVDFDSWAGESFYN----DKMDTVVEELEKANILTE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              ++KSDG+  Y   DLA    +++   FD  IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  +++
Sbjct: 329 VGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L       + FD+ ++     E  
Sbjct: 386 EAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFEGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR +SI R+A++     + D                E +L   L    + + 
Sbjct: 445 GPYVQYSYARAKSILRKAEEQNITAEPDFT--------KLTSKEEFELAKTLDGLQKAVV 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I
Sbjct: 497 LGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATAQVI 550

Query: 571 NSGLNIIGVESPNEM 585
            + L +IG++   +M
Sbjct: 551 KNALFLIGIDVVEKM 565


>gi|229091172|ref|ZP_04222395.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228692303|gb|EEL46039.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 562

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGLEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|110803183|ref|YP_698948.1| arginyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110683684|gb|ABG87054.1| arginine--tRNA ligase [Clostridium perfringens SM101]
          Length = 565

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 242/615 (39%), Gaps = 86/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++   ++ + I+S ++  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLGP-YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             ++AL     + P      +Y+K         EL D+           +++ + + + +
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L +  D +  E  ++      +  +++ L +   + E       S
Sbjct: 231 K-DLSLKEFNKIYDMLGVDFDSWAGESFYN----DKMDKVVEELEKANILTE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              ++KSDG+  Y   DLA    +++   FD  IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  +++
Sbjct: 329 VGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L       + FD+ ++     E  
Sbjct: 386 EAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR +SI R+A++     + D                E +L   L    + + 
Sbjct: 445 GPYVQYSYARAKSILRKAEEQEITAEPDFT--------KLTSKEEFELAKTLEGLQKAVI 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I
Sbjct: 497 LGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATAQVI 550

Query: 571 NSGLNIIGVESPNEM 585
            + L +IG++   +M
Sbjct: 551 KNALFLIGIDVVEKM 565


>gi|168207505|ref|ZP_02633510.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168216948|ref|ZP_02642573.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|170661125|gb|EDT13808.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|182380942|gb|EDT78421.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 565

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 242/615 (39%), Gaps = 86/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++   ++ + I+S ++  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLGP-YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             ++AL     + P      +Y+K         EL D+           +++ + + + +
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L +  D +  E  ++      +  +++ L +   + E       S
Sbjct: 231 K-DLSLKEFNKIYDMLGVDFDSWAGESFYN----DKMDTVVEELEKANILTE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              ++KSDG+  Y   DLA    +++   FD  IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  +++
Sbjct: 329 VGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L       + FD+ ++     E  
Sbjct: 386 EAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR +SI R+A++     + D                E +L   L    + + 
Sbjct: 445 GPYVQYSYARAKSILRKAEEQNITAEPDFT--------KLTSKEEFELAKTLEGLQKAVI 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I
Sbjct: 497 LGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATAQVI 550

Query: 571 NSGLNIIGVESPNEM 585
            + L +IG++   +M
Sbjct: 551 KNALFLIGIDVVEKM 565


>gi|72383390|ref|YP_292745.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|109895017|sp|Q46HI6|SYR_PROMT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72003240|gb|AAZ59042.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 607

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 132/640 (20%), Positives = 242/640 (37%), Gaps = 95/640 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEK-------KILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           + S+RL+  L     K+  ++        IL    +        G    N A+ L++ + 
Sbjct: 3   EISARLEEALNRAFIKVFPQEDRSSKTSSILTGSNLVPASKPEFGDFQINCALSLAKEIK 62

Query: 59  LDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSG----- 109
             P  IA+ I  +++ D D   +     IAG GFINL ++   L   +   +        
Sbjct: 63  QPPREIAQKIANQLQKDNDFVRMCNPPRIAGPGFINLSINSKTLISEIHVRLNDKRLGVP 122

Query: 110 -IEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
             ++  + I +G    +V ++F S N    MHVGH R  ++GD+LA ++ F GYEV R  
Sbjct: 123 LKKFSTDKIEEGKSNNRVILDFSSPNIAKEMHVGHLRSTIIGDSLARILEFRGYEVLRLN 182

Query: 166 YINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSEL 221
           ++ D G Q   L   +     + L+  D    SDL   Y          +   +K  SE+
Sbjct: 183 HVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYRQAKKRFDEDQIFQNKSRSEV 242

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +N        ++   + Q +    R + + +  + DI ++E      +   + D+I++L 
Sbjct: 243 VNLQAGDKESLI---AWQLLCNQSRKEFQKIYDRLDIKLTERGESFYNKFLV-DVINDLK 298

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +  +          +  Q   +D           G      + KSDG + Y   DLA  
Sbjct: 299 NKKLL-------INDQGAQCIFLDG-----LVGKNGKPQPIIIQKSDGGFNYATTDLAAI 346

Query: 342 KCK-----YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           K +     +  G   +IYV  +  + +   +  +A   +       +       L +   
Sbjct: 347 KYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANWIPTDCQIEHVPFG-LVQGED 405

Query: 397 PIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRFM 425
             K+  R+G+ I L  ++DE                               VG  S+++ 
Sbjct: 406 GKKLKTRSGETIRLVDLLDEAIQRAKNDLKNRLNTERRSENENFIDKVSTTVGIASIKYA 465

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +       F F K+    + N   Y+ YA  R   I R+        D ++   N+ 
Sbjct: 466 DLSQNRISNYQFSFDKMLSL-QGNTAPYLLYALVRIAGISRKGG------DLNVSSHNIQ 518

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             ES     E +LI  L +   +I        P +L  YL++L+  F+  +       ++
Sbjct: 519 FNES----QEWELIRKLLQLDYIIAEVEKELLPNRLCGYLFELSQTFNRFYD------QV 568

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++A+       RL L    A  +  G++++G+ +   M
Sbjct: 569 PILKASEPS-RASRLILCSITADTLKLGMSLLGIPTLERM 607


>gi|18310643|ref|NP_562577.1| arginyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|23822195|sp|Q8XJU2|SYR_CLOPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18145324|dbj|BAB81367.1| arginine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 565

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 242/615 (39%), Gaps = 86/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++   ++ + I+S ++  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLGP-YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             ++AL     + P      +Y+K         EL D+           +++ + + + +
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L +  D +  E  ++      +  +++ L +   + E       S
Sbjct: 231 K-DLSLKEFNKIYDMLGVDFDSWAGESFYN----DKMDKVVEELEKANILTE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              ++KSDG+  Y   DLA    +++   FD  IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  +++
Sbjct: 329 VGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L       + FD+ ++     E  
Sbjct: 386 EAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR +SI R+A++     + D                E +L   L    + + 
Sbjct: 445 GPYVQYSYARAKSILRKAEEQKITAEPDFT--------KLTSKEEFELAKTLEGLQKAVI 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I
Sbjct: 497 LGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATAQVI 550

Query: 571 NSGLNIIGVESPNEM 585
            + L +IG++   +M
Sbjct: 551 KNALFLIGIDVVEKM 565


>gi|299143915|ref|ZP_07036995.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518400|gb|EFI42139.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 569

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/614 (21%), Positives = 239/614 (38%), Gaps = 81/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +   +K +D KI    ++  R  IE P +   G  +      L++    +P  IA
Sbjct: 3   NFKDEI---VKILDGKIPELSEVEIRNAIETPPNYEMGDFAFPV-FSLAKVYKKNPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
             I   I      + V      +IN +++   L +  L  +     +YG+  IGKG  V 
Sbjct: 59  GEIAGSIN-SEYFEKVESKSA-YINFFINKKELAETVLREVSEKNEDYGKLGIGKGENVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH R  ++GD+L  + AF GY      ++ D G Q   L +++  W
Sbjct: 117 VEYSSPNIAKPFHIGHIRSTIIGDSLKRIYAFLGYNTIAINHLGDYGTQFGMLIVAIKKW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
             ++ + N+        Y  +  +               N  E       K  ++  +  
Sbjct: 177 GDKEVIKNDPIPELLKLYVKINAEAEADPALKDECRHWFNELENGNEEAYKLWEWIREIS 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +         L++ +D F  E  +    P      ++ L   G +         S   Q 
Sbjct: 237 LDEFNKVYNMLDVHYDSFNGESFYSDKMPGE----VETLKNSGAL-------KLSDGAQI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+++  L              ++KSDGS  Y   D+A    ++E       IYV+GS  
Sbjct: 286 VDLEKYNL----------PPSLIIKSDGSTIYITRDIAAAHYRHETYHPKRNIYVVGSQQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415
             + ++L+AV A +    +   V +   +    +G    +S R G  + L  V++     
Sbjct: 336 ILHFQQLKAVLAEMGYDWSDEVVHVPFGMVSLEEGT---LSTRKGRVVYLEDVLNKAKDK 392

Query: 416 ------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   +VG  +V+F  L+ +  +   FD+ K      E   
Sbjct: 393 VLEILTEREKQRGEKIENKEELAAQVGIGAVKFQELFNQRIKDYVFDWDKTLTFEGE-TG 451

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY +AR  S+  +          +    N           EL L+  + ++  V+ +
Sbjct: 452 PYVQYVHARICSLLEKG---------NFDKENKFNASLLTLDEELNLLRTIYKFTDVVID 502

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EPY +  Y+ +LA +F+ +++  +       V   + +L   RL L +AV ++I 
Sbjct: 503 AHEKYEPYFITRYVVELAKLFNKYYNSTQ-------VIVEDEELKNARLMLCYAVKTVIK 555

Query: 572 SGLNIIGVESPNEM 585
            GLN+IGV +P +M
Sbjct: 556 EGLNLIGVAAPEKM 569


>gi|228933503|ref|ZP_04096356.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826232|gb|EEM72012.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 562

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 136/613 (22%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALIVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++G+E+P EM
Sbjct: 550 GLRLLGMEAPEEM 562


>gi|33860747|ref|NP_892308.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|39932084|sp|Q7V396|SYR_PROMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33633689|emb|CAE18646.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 603

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 128/635 (20%), Positives = 230/635 (36%), Gaps = 87/635 (13%)

Query: 3   LFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +F + +   +  L E  I  + K E + + + +I +      G    N  ++LS+    +
Sbjct: 4   IFKELTKSFEETLLESLIKNEKKEEFEKIRKNLINQASKEEFGDYQCNICLVLSKIYKSN 63

Query: 61  PLTIA----ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY---- 112
           P  IA    E +    KI    +++ IAG GFIN+ L    L + + S +          
Sbjct: 64  PREIAIAFIETLKENKKISNLCENLEIAGPGFINIKLKNKVLIEAIKSNIKCPRAGVPLS 123

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            +N I    KV ++F S N    MHVGH R  ++GD+++ +  F GY V R  +I D G 
Sbjct: 124 HKNNIYSKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSISKIFEFRGYIVLRLNHIGDWGT 183

Query: 173 QINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PE 226
           Q   L   +   Y   L   D    SDL E Y           E   +   E++     +
Sbjct: 184 QFGMLITQLKDLYSSDLKEIDRIKISDLVEFYKASKKRFDNETEFQKRSREEVVQLQSGD 243

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           +K +   K      +    R +   +    +I I E      +P  ++ II++L  +  +
Sbjct: 244 KKSIEAWK-----LLCNQSRKEFDQIYKTLNIKIKERGESFYNP-FLKSIIEDLNYKKIL 297

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            E        +  +   +D       +   G+ +   + K DG + Y   DLA  + ++ 
Sbjct: 298 IE-------DQGAKCVFLDG-----MTNKEGNPLPLIIQKKDGGFNYATTDLAALRYRFT 345

Query: 347 R-----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           +         +IYV     S +   +  VA   +       V       L +     K+ 
Sbjct: 346 KEPYGDNAARIIYVTDHGQSNHFAGVFQVAKRANWIPKDCEVNHVPFG-LVQGIDGKKLK 404

Query: 402 KRAGDFITLRHVVDE-------------------------------VGSDSVRFMMLWRK 430
            R GD I L+ ++ E                               +G  +V++  L + 
Sbjct: 405 TREGDTIKLKDLLSESVKRAKEDLLKRLENESRFENDDFVLNTSKVIGIGAVKYADLSQN 464

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                 F F K+      N   Y+ Y   R   I R+       ++ +    +       
Sbjct: 465 RITNYQFSFEKMLSL-NGNTAPYLLYTLVRISGINRKNNMTEEAINLESISYS------- 516

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E +LI  L ++  VI +      P +L  YL++L   F+  +       ++  ++ 
Sbjct: 517 -HDLEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCKTFNRFYD------QVPILKG 569

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + RL L       +   L ++G+E+   M
Sbjct: 570 E-IDTKISRLTLCALTEKTLKLSLELLGIETLERM 603


>gi|47570082|ref|ZP_00240741.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553243|gb|EAL11635.1| arginyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 562

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 232/613 (37%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+IL+  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTDELTQKQILE--LIESPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKL-SDPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEDGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLGEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWGD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|169342733|ref|ZP_02863774.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169299239|gb|EDS81309.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 565

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 120/615 (19%), Positives = 242/615 (39%), Gaps = 86/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++   ++ + I+S ++  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLGP-YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             ++AL     + P      +Y+K         EL D+           +++ + + + +
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L +  D +  E  ++      +  +++ L +   + E       S
Sbjct: 231 K-DLSLKEFNKIYDMLGVDFDSWAGESFYN----DKMDTVVEELEKANILTE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              ++KSDG+  Y   DLA    +++   FD  IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  +++
Sbjct: 329 VGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L       + FD+ ++     E  
Sbjct: 386 EAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QY+YAR +SI R+A++     + D                E +L   L    + + 
Sbjct: 445 GPYIQYSYARAKSILRKAEEQNITAEPDFT--------KLTSKEEFELAKTLEGLQKAVI 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I
Sbjct: 497 LGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATAQVI 550

Query: 571 NSGLNIIGVESPNEM 585
            + L +IG++   +M
Sbjct: 551 KNALFLIGIDVVEKM 565


>gi|195355443|ref|XP_002044201.1| GM22521 [Drosophila sechellia]
 gi|194129490|gb|EDW51533.1| GM22521 [Drosophila sechellia]
          Length = 665

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/588 (20%), Positives = 236/588 (40%), Gaps = 77/588 (13%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
              G    N AM LS+ L        P  IA  +       P ++ + IAG GF+N++LS
Sbjct: 113 AKFGDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLS 172

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y    LS+++ +G+     +     +V ++F S N    MHVGH R  ++G++L  L+
Sbjct: 173 KDYASSALSNLLRNGVTPPEVI---KKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLL 229

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +  R+   L  +   SDL   Y          +E
Sbjct: 230 EFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEE 289

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +  S +++  +     I    + + +  + R + + +  + DI + E    F++   
Sbjct: 290 FKKRAYSRVVSLQKGVPNSI---KAWELICNVSRKEFQTIYERLDISVKERGESFYQ--- 343

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  +++ L  +G +              + D  R+ +    T  G  +   ++KSDG 
Sbjct: 344 SRMLSVVEYLRGKGLL--------------EVDEGREIMWPDDTKTG--IPLTIVKSDGG 387

Query: 331 YTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLC 386
           +TY  +D+A  + + E    D +IYV+ S  S +   +   A     ++    +++ +  
Sbjct: 388 FTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLSHRVDHV-Q 446

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             V L  DG   K   R+GD + L  ++DE                             +
Sbjct: 447 FGVVLGEDGK--KFKTRSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELKDAQESL 504

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +++  L         F F K+ E  + N   Y+ Y Y R  SI R + + F +L  
Sbjct: 505 AYGCIKYSDLCHNRISDYIFSFDKMLE-DRGNTAVYLLYTYTRICSIARNSGEDFTNLPE 563

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L   N++         E +L   L +   ++   +     + L  + +++ +VF   + 
Sbjct: 564 ILKKTNIV----LAHEKEWKLAKTLLKLHDILIKCSKELFLHFLCEFCFEVCTVFTEFYD 619

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + +  Q +   +   R+ +  A A+++     I+G++  ++M
Sbjct: 620 SCYCIEKNK--QGDIIAVNHSRILMCEATAAVLRQCFYILGLKPVSKM 665


>gi|71854403|gb|AAZ52426.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 529

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 123/577 (21%), Positives = 230/577 (39%), Gaps = 81/577 (14%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-K 100
            G L+   A  L++ L   P  IA  +  +I      + V   G  +IN +L  + +  +
Sbjct: 1   MGDLAFP-AFSLAKVLRKAPQMIASELAEQIDES-QFEKVVAVGP-YINFFLDKAKISSQ 57

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +L  ++ +G +Y +   G+G  V I+  S N   P  +GH R  V+GD+LA + A  GY+
Sbjct: 58  VLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYK 117

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
             +  ++ D G Q   L ++      +A        P      +Y++      A+  +  
Sbjct: 118 PVKINHLGDWGKQFGMLIVAYKKWGDEAAVQ---AHPIDELLKLYVR----INAEAETDP 170

Query: 221 LLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIR 274
            ++    +W   ++D    + +       + L   N  +D      D + G+      + 
Sbjct: 171 TVDEEAREWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMD 230

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +++D L  +  + E                 +   +      G +    + KSDG+  Y 
Sbjct: 231 EVLDLLEAKNLLVES----------------KGAQVVNLEKYGIEHPALIKKSDGATLYI 274

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             DLA    +     F   +YV+G++ + + K+L+AV   +    +  ++       + +
Sbjct: 275 TRDLAAALYRKRTYDFAKSVYVVGNEQAAHFKQLKAVLKEMGYDWSD-DMTHVAFGLVTK 333

Query: 394 DGMPIKMSKRAGDFI-------------------------TLRHVVDEVGSDSVRFMMLW 428
            G   K+S R G+ I                             V   VG  +++F  L 
Sbjct: 334 GGA--KLSTRKGNVILLEPTVAEAINRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLK 391

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                  DFD   +     E    YVQYA+AR +SI R+A           F  +     
Sbjct: 392 TDRMNGYDFDLEAMVSFEGE-TGPYVQYAHARIQSILRKAD----------FTPSATTTY 440

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           S  D    ++I  + ++PR+I+  +   EP  +A +  +LA  F+ +++H R        
Sbjct: 441 SLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRIL------ 494

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++      RL L +A A+++   L ++GV++PNEM
Sbjct: 495 --DDNSERDNRLALCYATATVLKEALRLLGVDAPNEM 529


>gi|312865751|ref|ZP_07725973.1| arginine--tRNA ligase [Streptococcus downei F0415]
 gi|311098626|gb|EFQ56848.1| arginine--tRNA ligase [Streptococcus downei F0415]
          Length = 563

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/611 (20%), Positives = 239/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   ++     +++E  +    ++E P++ + G L+      L++ L   P  IA
Sbjct: 2   DSKLIIAQEIQAALPDMELEAIVN---LLEVPKNSSMGDLAFPV-FSLAKVLRKAPQAIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I+ D   + V   G  +IN +L+   + + +L+ ++    +YG+  +G+   + 
Sbjct: 58  SELVEKIQSD-KFEKVQAVGP-YINFFLNKQEISQAVLAEVIAKDKDYGQQELGQCKNIT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P  VGH R  V+GD+LA +    GY+  +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPFSVGHLRSTVIGDSLAKIFEKIGYKSVKINHLGDWGKQFGMLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             + A+     +     Y  +  +   +   D+ + +     E          ++     
Sbjct: 176 GDEGAVRATPINELLKLYVRINKEAESQPELDEEARDWFRKLEAGDQE-----AISLWQW 230

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + L   N  +D+   + D + G+      + +++  L  +  + E            
Sbjct: 231 FRDESLVEFNRLYDLLRVQFDSYNGEAFYNDKMDEVVTLLEDKDLLQES----------- 279

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
                +   + +    G +    + KSDG+  Y   DLA    +     F   IYV+G++
Sbjct: 280 -----QGAQVVKLDKYGIENPALIKKSDGATLYITRDLAAALYRKRTYDFAKSIYVVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            + + K+L+AV   +    +  ++       + +DG   K+S R G+ I           
Sbjct: 335 QAAHFKQLKAVLKEMDYDWSD-DITHVPFGLVTKDGK--KLSTRKGNVILLEPTIAEAIK 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V   VG  +++F  L        DFD   +     E    YV
Sbjct: 392 RAGDQIEAKNPDLPNKEAVAQAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAYAR +SI R+A           F  +        D    ++I  +  +P  I+ A  
Sbjct: 451 QYAYARIQSILRKAD----------FKADPAVGYYLDDAESWEIIKLIQNFPAAIKRAAD 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +   LA  F+ +++H R          +       RL L +  A ++   L
Sbjct: 501 NFEPSIIAKFAISLAQAFNKYYAHNRIL--------DQSPERDSRLALSYTTALVLKEAL 552

Query: 575 NIIGVESPNEM 585
            ++GV++P+EM
Sbjct: 553 RLLGVDAPDEM 563


>gi|291521118|emb|CBK79411.1| arginyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 561

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 126/609 (20%), Positives = 238/609 (39%), Gaps = 78/609 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ N L +    I+V        +IE P     G  +      L++     P  IA+
Sbjct: 1   MKNQIVNLLSQ---NIEVLTSEEISQLIEIPPKPEMGDFAF-PCFRLAKSYHKAPPMIAQ 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   I     +  + + G G++N Y+  +   + +     +  +YG +  GK   + I+
Sbjct: 57  DLKESIGDQAFLSEIKVIG-GYLNFYVDKAQYAQQIIDKYNNTTDYGCSDQGKDKTICID 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           + S N     HVGH R  ++G++L  + +  GY+V R  ++ D G Q   L ++   W  
Sbjct: 116 YSSPNVAKNFHVGHLRTTIIGNSLYKIFSKLGYKVVRINHLGDWGTQFGKLIVAYKKWGS 175

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFPE--EKWLPIVKDYSVQAMM 242
           ++A+     +     Y   + +    + L D+  +  L   +  E+ L I + +   ++ 
Sbjct: 176 REAVEEKGIEELMDIYVKFHEEAEKDDSLNDEARAWFLKMEQGNEEALEIWQWFRDISLK 235

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +R     L ++ D F  E  +         D+I  L   G + E       S+     
Sbjct: 236 EFMRV-YNILGMEFDSFAGESFY----RDKTADVIKRLTDDGLLKE-------SQGAMIV 283

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS 361
            +D            D     + K DGS  Y   DLA    +     FD  +YV G +  
Sbjct: 284 PLDEY----------DMPPCIVAKKDGSSIYATRDLAAILYRKATYNFDRCLYVTGLEQK 333

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            +  ++  V   +    A+  V +   +   + G   K+S R G+ I    ++ E     
Sbjct: 334 LHFAQVFKVIELMGNDYAKNLVHIPYGLVSLKSG---KISSRKGNVIFAEDLLRESINKT 390

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               VG  ++ F  L+ +  + + FD+ K+     E    YVQY
Sbjct: 391 TSIIEEKNPDIPDKEEVAKQVGIGAIIFNDLYNQRIKDVIFDWNKLLNFDGE-TGPYVQY 449

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            YAR  S+ R+  ++   +D+ L            D + + L+  +  YP+VI++A    
Sbjct: 450 TYARASSVLRKIGEVPDTIDYTLLT----------DEASIGLLKEIERYPQVIKDAAERY 499

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A Y  DLA  F+  +   +       +   ++     R  +V     II   L++
Sbjct: 500 EPSVIARYSIDLAHAFNKFYHECQ-------INVEDKTTKYTRTNVVKIARYIIKDALSL 552

Query: 577 IGVESPNEM 585
           +G++ P +M
Sbjct: 553 LGIQCPEQM 561


>gi|163939982|ref|YP_001644866.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862179|gb|ABY43238.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 562

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/613 (21%), Positives = 233/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTKNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  K+L +I+    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDKVLKTILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N+  + E     ++  +V      K + EL       W   ++   + +V+  
Sbjct: 174 ---KKWGNEEVVKEDPIRELFKLYVQFHEEAKENKELEEEG-RAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+      + D I+ L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNDKMEDFIEILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYEFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 VALAEQNIEEKNPNLKQKEDVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL L +AV  ++  
Sbjct: 498 FNKNEPSTISKYVLDVAQAFNKYYGNVRIL--------EESEEKESRLALAYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P EM
Sbjct: 550 GLRLLGVGAPEEM 562


>gi|229824015|ref|ZP_04450084.1| hypothetical protein GCWU000282_01319 [Catonella morbi ATCC 51271]
 gi|229786369|gb|EEP22483.1| hypothetical protein GCWU000282_01319 [Catonella morbi ATCC 51271]
          Length = 563

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/612 (23%), Positives = 255/612 (41%), Gaps = 86/612 (14%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            S + + L  +  +   E+ I    +IE P    HG L+      L++     P  IA+ 
Sbjct: 4   KSAVVSALSPVLAEHLTEQAI--EQLIEVPSHAEHGDLAFPV-FQLAKVFRKAPQAIAQE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  ++      D V   G  ++N +L   + + + L +++  G  YG++ +G+G  V I+
Sbjct: 61  VAEQVDAS-KFDKVVAMGP-YVNFFLKRGAVVNETLHAVLEGGASYGQSDLGQGRNVVID 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
             S N   PM +GH R  V+G++++ ++A  GY+  R  ++ D G Q   L ++   W  
Sbjct: 119 MSSPNIAKPMSMGHLRSTVIGNSISLILAKLGYQPVRVNHLGDWGTQFGKLIVAYQGWGD 178

Query: 186 QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +  +  +        Y   + K     EL D+  +      +        D  + A+ + 
Sbjct: 179 EATVKADPVKELVKLYVDFHEKAETQPELEDQARAIFKRLED-------GDPEMLALWQW 231

Query: 245 IRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            R++ LK     +D+   E D + G+      + +I+D L  +G +              
Sbjct: 232 FREESLKEFQKVYDLLEVEFDSYNGEAFYNDKMDEIVDLLEEKGLL-------SVDNGAT 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              ++ + L              + KSDGS  Y   DLA    +     F   +YVMGS+
Sbjct: 285 LVHLEDETL----------PPALIKKSDGSTLYLTRDLATAYYRKRTYDFAKNLYVMGSE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K+L+ V   +  + A+ ++       +  +G   K+S R G  + L  V+ E   
Sbjct: 335 QSVHFKQLQTVLEMMGNEWAK-DMAHVPFGLITLNGK--KLSTRKGKIVLLEEVLKEAIS 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +     DF+  ++  Q +     YV
Sbjct: 392 LARQQIELKNPGLENKDQVARQVGVGAVVFHDLKTERMNSFDFNLEEIV-QFEGETGPYV 450

Query: 455 QYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           QY +AR RSI  +   ++    +FDL            D    ++   LA+YPR+I  A 
Sbjct: 451 QYTHARSRSILSKYGQEVDLSAEFDLS-----------DDYAWEVAKKLADYPRIIRQAG 499

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A YL  LA +F+ ++++ R          +    T  R+ LV AVA ++  G
Sbjct: 500 DRYEPSVVAKYLVQLAQLFNKYYANSRIL--------DQDAGTASRIALVAAVAQVLKDG 551

Query: 574 LNIIGVESPNEM 585
           L+++G+ +P++M
Sbjct: 552 LHLLGLHAPDKM 563


>gi|304440484|ref|ZP_07400371.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370962|gb|EFM24581.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 569

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 135/615 (21%), Positives = 254/615 (41%), Gaps = 83/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L +   +   ++ IL  + IE P     G  +      L++    +P  IA
Sbjct: 3   DFKEEIAKILSD-KIESMTKEDIL--MQIEIPPSYEMGDYAFPV-FSLAKIFRKNPNMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-VSGIEYGRNLIGKGTKVN 124
           E + A IK     + V   G  +IN + +   L K +   +      YG++ +G+G  V 
Sbjct: 59  EEMAASIK-SEYFEKVENKGA-YINFFTNKEVLAKTVVEEISKEKENYGKSKLGEGKTVI 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P H+GH R  ++GD+L  +  F GY V    ++ D G Q   L  ++  W
Sbjct: 117 VEYSSPNIAKPFHIGHIRSTIIGDSLKRIHKFLGYNVVSINHLGDYGTQFGMLIYAIKNW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
              + +  N        Y  V  +    E   +         E+     VK      +  
Sbjct: 177 GNIEEIEKNPIPELLKLYVRVNTEADQNEEIKEECRHYFASLEKGDEDAVK------IWT 230

Query: 244 IIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            IR+  LK  NI +D+   + D + G+      ++  + R     E +     S+  +  
Sbjct: 231 WIREISLKEFNIVYDLLGIKFDSYNGESFYSDKMMKQVERM----EKLGILKDSEGAKIV 286

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           D+++  L              +LKSDGS  Y   D+A  + ++E    +  IYV+ ++ +
Sbjct: 287 DLEKYNL----------PPALILKSDGSTIYITRDIAAAEYRHETYHPEKNIYVVATEQN 336

Query: 362 GYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
            + K+L+AV   +      ++  +   ++ L       K+S R G  +            
Sbjct: 337 LHFKQLKAVLKEMQYDWYDEVTHVAFGMINLADG----KLSTRQGRVVYLIDVLNKAIEK 392

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                +  +VG  +++F  L+ +  +   FD+ K      E+  
Sbjct: 393 IMEILNEREETSGVKIANKEELAKQVGIGAIKFQELFNQRIKDYTFDWDKTLSFEGES-G 451

Query: 452 FYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            YVQYA+AR  S+  +   DI  ++D  L            +  E+ ++ +L ++  V+E
Sbjct: 452 PYVQYAHARICSLLEKGGFDINKEVDSSLLN----------NEMEINILRNLYKFTEVVE 501

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A    EP+ ++ Y+ +LA  F+ +++          +   + KL   RL L ++V ++I
Sbjct: 502 DAKEKYEPFFISRYVVELAKDFNKYYNQV-------TINVEDEKLKNTRLMLCYSVKNVI 554

Query: 571 NSGLNIIGVESPNEM 585
           + GL ++G+E+P +M
Sbjct: 555 SEGLRLLGIEAPEKM 569


>gi|229172904|ref|ZP_04300458.1| Arginyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228610649|gb|EEK67917.1| Arginyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 595

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/613 (21%), Positives = 239/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 35  DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 91

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +   +++G E YG+N  G    V 
Sbjct: 92  KEVEEKLN-DPFFAKVEAVGP-YVNVFFNRETVSDAVLKTILAGKEKYGQNHFGCEKTVV 149

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 206

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 207 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEALEEEGRAWFKKLEEGDEEAVELW 262

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E       S+ 
Sbjct: 263 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEE-------SEG 315

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
               +++ +++              + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 316 ALVVNLEEERM----------PPCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVG 365

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 366 PEQSLHFNQFFTVLKKLGFTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 422

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 423 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 481

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 482 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAA 530

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 531 FNKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 582

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 583 GLRLLGVEAPEEM 595


>gi|81429031|ref|YP_396031.1| arginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|109894998|sp|Q38VQ9|SYR_LACSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78610673|emb|CAI55724.1| Arginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 563

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 129/611 (21%), Positives = 242/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++   L  +       +K+    +IE P+    G  +     IL++ L   P  IA
Sbjct: 2   DFKQQVVTALTGVLGDSLPAEKVAQ--LIETPKTSDLGDYAF-PTFILAKTLRKAPQQIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +V ++ +    + V IA   +IN +L  +    +IL +++    +YG + +G G  V 
Sbjct: 59  QDLVDQMDV-AGFEKV-IANGPYINFFLDKAAFSDQILKTVLTEAAKYGESDLGHGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G+++A ++   G+   +  ++ D G Q   L ++   W
Sbjct: 117 IDMSSPNIAKPISMGHLRSTVIGNSIAKILTKVGFNPIKINHLGDWGTQFGKLIVAYKKW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             ++ +  +       YY   + + V     D  +           L    + + Q    
Sbjct: 177 GSEEEVKEDPITNLLKYYVKFHQEDVEHPELDDEARAWFRK-----LEAGDEEATQLWSW 231

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              + LK     +D+   E D + G+      +  +++ +  +G + E       S+  +
Sbjct: 232 FRSESLKEFQKIYDMLGVEFDSYNGEAFYNDKMDAVVEAIESKGLLQE-------SRGAE 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+    L              + KSDG+  Y   DLA    +++   F   +YV+G +
Sbjct: 285 IVDLTAYNL----------NPALIKKSDGATLYMTRDLAAAMYRHDTYNFVQSLYVVGGE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              +  +L+AV   +    +   +       + + G   K+S R+G  I           
Sbjct: 335 QREHFNQLKAVLKEMGNDWSD-EIHHIPFGLITQGGK--KLSTRSGRVILLEEVLNDAVK 391

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  +VG  +V F  L     +  DFD  +V     E    YV
Sbjct: 392 LAGAQIEAKNPDLPNREEVAKQVGIGAVIFHDLKNDRLDNFDFDLEEVVRFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A       D          Q    D +   ++  L+ +P VI  A+ 
Sbjct: 451 QYTNARAQSILRKANQEVVVDD----------QLVVADDNAWDVLKMLSNFPAVIARASK 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ ++++ +           +      RL LV +V+ ++ + L
Sbjct: 501 EYEPSIVAKYALRLAKAFNKYYANSKIL--------ADDDQRNARLSLVKSVSIVLETAL 552

Query: 575 NIIGVESPNEM 585
           +++GV++P EM
Sbjct: 553 DLLGVQAPKEM 563


>gi|229011482|ref|ZP_04168670.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228749773|gb|EEL99610.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 562

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/613 (21%), Positives = 232/613 (37%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +  I +    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N+  + E     ++  +V      K + EL       W   ++   + +V+  
Sbjct: 174 ---KKWGNEELVKEDPIRELFKLYVQFHEEAKENKELEEEG-RSWFKKLEEGNEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+      + D I  L     + E          
Sbjct: 230 NWFRYESLKEFSRIYELLGVEFTNFQGEAFYNDKMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEKEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 VALAEQNIEEKNPNLKQKEDVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL L +AV  ++  
Sbjct: 498 FNKNEPSTISKYVLDVAQAFNKYYGNVR-------ILEENEE-KESRLALAYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P EM
Sbjct: 550 GLRLLGVGAPEEM 562


>gi|119468958|ref|ZP_01611983.1| arginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119447610|gb|EAW28877.1| arginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 580

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 125/617 (20%), Positives = 238/617 (38%), Gaps = 69/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  +  +      E          RP+    G    N AM  ++ +  +
Sbjct: 1   MNIRTIL---VEKAIAAMTAAGLPEDTNPAVTQSTRPQ---FGDYQINGAMGAAKKMKSN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+  + +    +   IAG GFIN++L P +L K +     S  +   N     
Sbjct: 55  PRELAQKIIDNLDVTDIAEKTEIAGPGFINIHLKPEFLAKSV-EAANSDAKLAVNEHANP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD +   + F G +V R+ ++ D G Q   L   
Sbjct: 114 QTVVVDYSSPNLAKEMHVGHLRSTIIGDAIVRALEFRGDKVIRQNHMGDWGTQFGMLIAH 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  Q +      L +               A K   +   F ++    +VK     A
Sbjct: 174 LEDQISQGVDLESVALAD--------LETFYRDAKKRFDDEEGFADKARDYVVKLQGGDA 225

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +     A +++H    SE+ + R + +  +  I   +        I+   K K   
Sbjct: 226 HCEKLWKLFIATSVKH----SEEVYKRLNVTLTQADIMAESAYNSELNDIISLLKDKNIA 281

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
             +    Q++F    +   G+     + KS G + Y   DLA    +  + G + ++  +
Sbjct: 282 -VESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGAERILIFV 340

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S +  ++E  A      + + +   C     +  DG P K   R G  + L  +++
Sbjct: 341 DARQSLHFNQVELTARKAGLLRDETSYEFCPFGTMMGADGKPFK--TRTGGTVKLADLLE 398

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    F++  +    + 
Sbjct: 399 ESISRAATKLAERESDLSDHERSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSF-EG 457

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               Y+QYAY R RSIFR++      L+ D+       +       +L+ ++ L     +
Sbjct: 458 ATAPYLQYAYTRVRSIFRKSGVDAASLNADVAIAEPQEKALALKLLQLEEVLDL-----M 512

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A     P+ L  YLY+LAS++   +      P L+  +     +   RL L + VA 
Sbjct: 513 ISEA----TPHVLCGYLYELASLYMTFYEAC---PVLK--EGVEPSVRDSRLVLCNLVAD 563

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+++G+E   +M
Sbjct: 564 TLKTGLDLLGIEVMEQM 580


>gi|229155777|ref|ZP_04283883.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228627763|gb|EEK84484.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 562

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 232/613 (37%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKL-SDPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIWILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|317968164|ref|ZP_07969554.1| arginyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 594

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 133/613 (21%), Positives = 227/613 (37%), Gaps = 92/613 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             ++L++ ++    +     +  D   +        G    N A+ L++PLG  P  IAE
Sbjct: 8   LENQLRDAMQRAFPEAAAAGQAFD-PQLAPASKPEFGDFQANGALPLAKPLGQPPRKIAE 66

Query: 67  LIVARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +V ++K D    +V     IAG GFIN+ L P  L   +   +      G   + +   
Sbjct: 67  AVVEQLKADESFMAVCQAPQIAGPGFINITLQPERLAAEVQQRLGD-ARLGVPAVEQAAP 125

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 126 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLK 185

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +AL   D+              +G +L   Y      F E++         V  + 
Sbjct: 186 QVAPEALETADA------------VDLG-DLVAFYREAKKRFDEDEAFQTTSREEVVKLQ 232

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY-----EGILPPPKS 296
                 LKA  +  D         R +   I D +D  L+ +G  +     EG++   ++
Sbjct: 233 GGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLSERGESFYNPYLEGVVRDLEA 285

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-----ERGF 349
                 D     +        D    P++  KSDG + Y   DLA  + ++       G 
Sbjct: 286 TGLLVVDDGAGCVFLEGVSGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGSAPEGDGA 345

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++YV  +  + +   +  VA       + A++  +   LV+   DG   K+  RAGD 
Sbjct: 346 RRVVYVTDAGQANHFAGVFQVARRAGWLPEGARLEHVPFGLVQ-GEDGK--KLKTRAGDT 402

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 403 VRLRDLLDEAVERSEADLRRRLEEEGRSEDEAFIAHVANTVGLAAVKYADLSQNRITNYQ 462

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+  D                     +  E 
Sbjct: 463 FSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGD---------LDAASTGGLQFSEPQEW 512

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A    L 
Sbjct: 513 ALVRELLKFDAVIAEVEEELLPNRLCTYLFELSQVFNRFYD------QVPVLKAEPEAL- 565

Query: 557 MMRLQLVHAVASI 569
             RL L    A  
Sbjct: 566 PSRLALCRLTADT 578


>gi|302528902|ref|ZP_07281244.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437797|gb|EFL09613.1| arginyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 572

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 131/572 (22%), Positives = 207/572 (36%), Gaps = 73/572 (12%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS 103
               N AM L + LG  P  +A  IV  +++D   D   IAG GF+N  L   +L + ++
Sbjct: 42  DYQCNLAMSLGKRLGKPPREVAAGIVENLELDGVADRPEIAGPGFLNFVLRREWLEQRVA 101

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
                    G     +  +V +++ S N    MHVGH R  V+GD ++ L+   G+EV  
Sbjct: 102 EQARDD-RLGVPETEQPRRVALDYSSPNVAKEMHVGHLRSTVLGDAISRLLRVVGHEVLP 160

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
             ++ D G     L       +      + SDL   +Y     K    E     S E + 
Sbjct: 161 HNHLGDWGTPFGMLIEH----HLDEPSGDRSDL-NAFYQAARRKFDADEAFATRSRERVV 215

Query: 224 FPEEKWLPI--VKDYSVQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDN 279
             +             V    +      + L I    D    E  ++      + +++D 
Sbjct: 216 KLQSGDPDTLAFWQELVDESTRHFNAAYRQLGITLTDDDIYGESFYNPY----LGEVVDE 271

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L   G           S        +           GD +   + K DG Y Y A DLA
Sbjct: 272 LEADGLT-------EISDGAVCVFPEGFA-----NREGDRLPLIVRKRDGGYGYAATDLA 319

Query: 340 YFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             +    ERG  +++YV+G+  + +   + AVA A           +     L  DG   
Sbjct: 320 TIRYWTAERGATDLLYVVGTPQAQHFAMIFAVARAAGWLDGVHAEHIGFGSILGADGKV- 378

Query: 399 KMSKRAGDFIT--------------------------LRHVVDEVGSDSVRFMMLWRKNS 432
            M  RAG+ I                            R V   VG  +V++  L     
Sbjct: 379 -MRTRAGETIKLANLLDEAVAQAAEVVAERSELSEEEQREVARAVGIGAVKYADLSSDRE 437

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD+ ++  +   N   Y+QYA+AR  SI  +A +   +    L            +
Sbjct: 438 RDYVFDWDRMLAKD-GNTSVYLQYAHARIESILAKAGETDDNAPVVL-----------QE 485

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +E  L + L  +   I  AT A  P+KL  YLYD A  F   +           + A  
Sbjct: 486 PAERALALTLLRFSEAISAATSAYAPHKLCTYLYDTAVTFSRFYEQC------PVLTAET 539

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +L   R+QL    +  +  GL ++G+E+P  
Sbjct: 540 PELRASRVQLAKLTSRTLVQGLALLGIEAPRR 571


>gi|195384810|ref|XP_002051105.1| GJ14045 [Drosophila virilis]
 gi|194147562|gb|EDW63260.1| GJ14045 [Drosophila virilis]
          Length = 594

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 116/619 (18%), Positives = 239/619 (38%), Gaps = 75/619 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-----LDP 61
            +  L+    +           +  I+         G    N AM LS+ +        P
Sbjct: 9   ITEHLEKVFTQAIATAYPRFSNVPAIIAAVNASPKFGDYQCNNAMGLSKKMKDEGINKSP 68

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             I   I       P ++ + +AG GF+N++LS  +    L+ ++  G++  +       
Sbjct: 69  RDIGLEIQRCCPASPIIEKIEVAGPGFVNIFLSKEFAVSSLTRMLREGVKPPK---VPRK 125

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ ++F S N    MHVGH R  ++G++++ L+ F  ++V R  ++ D G Q   L   +
Sbjct: 126 RILVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFLQHDVIRINHLGDWGTQFGMLIAHL 185

Query: 182 FWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             R+   L  +    DL E +Y     +    E   K +   +   +       K  + Q
Sbjct: 186 EDRFPNFLNESPPIGDLQE-FYKESKKRFDADESFKKRAYNRVVTLQSGEPAATK--AWQ 242

Query: 240 AMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +  + R + + +  + D+ I E    +++   S +  +++ L  +G +           
Sbjct: 243 QICDVSRKEFQKIYDRLDVTIQERGESYYQ---SRMLTVVEFLRNKGLL----------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVM 356
                ++D  + +    +    +   ++KSDG +TY  +D+A  +C+ E      +IYV+
Sbjct: 289 -----ELDDGREIMWPDVNKSGIPLTIVKSDGGFTYDTSDMAAIRCRLEEDLATWLIYVV 343

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLC--ELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            +  S +   +   A         I+ +      V L  DG   K   R+GD + L  ++
Sbjct: 344 DAGQSTHFHGIFKAAERAGILNPNIHRVDHVQFGVVLGEDGK--KFKTRSGDTVKLSDLL 401

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           DE                             V    +++  L         F F K+ + 
Sbjct: 402 DEGLKYSLKQLQERGRDQILTPNELVEAQEAVAYGCIKYTDLCHNRISDYIFSFDKMLD- 460

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ Y Y R  SI R + + F +L  ++  +  I  E E    E +L+  L + 
Sbjct: 461 DRGNTAVYLLYTYTRICSIARNSGEDFSNL-AEILDKFQIVLEHE---KEWKLVKTLLKL 516

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+         + L  + Y++ +VF   + +     + +       K+   R+ +  A
Sbjct: 517 HDVLMKCANGLFLHFLCEFCYEVCTVFAEFYDNCYCIEKNKA--GEICKINHSRILICEA 574

Query: 566 VASIINSGLNIIGVESPNE 584
            A+++ +  +I+G++   +
Sbjct: 575 TAAVLRTCFHILGLKPVAK 593


>gi|167748068|ref|ZP_02420195.1| hypothetical protein ANACAC_02812 [Anaerostipes caccae DSM 14662]
 gi|167652060|gb|EDR96189.1| hypothetical protein ANACAC_02812 [Anaerostipes caccae DSM 14662]
          Length = 563

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 126/612 (20%), Positives = 254/612 (41%), Gaps = 82/612 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ + +   D   +++++ + RI +E P     G  +      LS+     P  IA+
Sbjct: 1   MRNKIIDLIT--DSIKELDRETVSRI-LEIPPQEDMGDFAF-PCFQLSKIFRKAPNIIAQ 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            +  +IK    V      G  ++N ++  + ++ ++L  + V    YG + IG G  + I
Sbjct: 57  EVAEKIKKTDFVSKTAAMGP-YVNFFIDRTMFVSEMLKQVSVDN--YGSSEIGCGKTICI 113

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           ++ S N     HVGH R  ++G+++  +    GY V R  ++ D G Q   L ++   W 
Sbjct: 114 DYSSPNVAKNFHVGHLRTTLIGNSIYRIYKKLGYRVERINHLGDWGTQFGKLIVAYKKWG 173

Query: 185 YQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAM 241
            ++A+  N  S+L + Y            L D+  +  +     +E+ L I + +   ++
Sbjct: 174 SKEAVEQNGISELMKIYVKFHEEAEKDDTLNDEARAWFVKMEQGDEEALSIWEWFKDISL 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  +   + L++  D +  E  +          ++D L ++G + E       S+    
Sbjct: 234 IEY-KRIYELLDVDFDSYAGESFY----RDKTSAVVDELKKKGMLKE-------SEGAFI 281

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+++           D     ++K DGS  Y   DLA    + +   F+  IYV G + 
Sbjct: 282 VDLEKY----------DMTPCLIMKKDGSSIYATRDLAAIFYRKKTYDFEKCIYVTGMEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
             +  ++  V   +  + A+ +++      +  +G   K+S R+G+ I    ++ E    
Sbjct: 332 KLHFAQVFKVVELMGYEWAKTDLIHVPYGLVSLEGG--KLSTRSGNIIYAEDILRESVSK 389

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  ++ F  L+ +  + + F + K+     E    YVQ
Sbjct: 390 IKEVINDKNPDLQDKEEVAKMVGIGAIIFNDLYNQRIKDVTFSWDKIHSFDGE-TGPYVQ 448

Query: 456 YAYARCRSIFRQAK--DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           Y YAR  S+ R+    D+  ++D  L            D + + L+  L  +P V+E A 
Sbjct: 449 YTYARAASVLRKTGITDVPEEIDSSLLT----------DEASVSLLKELIRFPEVVETAA 498

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A ++  +A  F+  +   + N         + KL   R++LV      I  G
Sbjct: 499 ERLEPSVVARFVMSVAQAFNHFYHENQCN-------VEDEKLKRARVKLVIIAKKAIKDG 551

Query: 574 LNIIGVESPNEM 585
           L+++G++ P +M
Sbjct: 552 LDLLGMKCPEQM 563


>gi|228985285|ref|ZP_04145448.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774440|gb|EEM22843.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 562

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 233/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKL-SDPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K + E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVKDNEE-LEEDGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|295425349|ref|ZP_06818052.1| arginine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065125|gb|EFG56030.1| arginine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 561

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 132/610 (21%), Positives = 250/610 (40%), Gaps = 80/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + +   ++ I  +I + K+ ++  +IERP++   G  +     IL++ +  +P  IA
Sbjct: 2   DFKNEV---VELIASQIDLPKEKIND-LIERPKNAKMGDYAF-PCFILAKTMHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +    +  S+   G  ++N  +     +   L  ++  G  YG   +GKG    
Sbjct: 57  KSIAENL-SSENFASIQAVGP-YVNFSIDHGKLISSTLKDVLDKGEHYGDQELGKGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A+ M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIANTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     VK +    +  
Sbjct: 174 GNEEDVKKDPIMNLFHYYVRFHKEAEKNPELDDEGREWFKKLEDGDPEAVKLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +     L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYNELGVTFDSYNGEAFFN----DKMQPVIDELRDKGLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
            DM             D+    ++KSDG+  Y   DLA  + + +   F  M+YV+G++ 
Sbjct: 283 VDMG-----------PDENPAIIVKSDGTSIYLTRDLAAAEWRMKHYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           + +   L+ V   +    A  ++       + + G   K+S R G+ +            
Sbjct: 332 AQHFVELKTVLKKMGYDWAD-DIHHVSFGLITQGGK--KLSTRKGNVVFLDQVLKDAVSL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L     +  DF+  +V  + + +   YVQ
Sbjct: 389 AKKQIQEKNPDLANQDQVAHDVGVGAVVFHDLKNDRLDNFDFNLEEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +S+ R+A  +      +    +        D     +   LA++PR+I  +   
Sbjct: 448 YTNARAQSVLRKASKVGKKPADNDLALD--------DEWSFAVAKDLADFPRIIARSADK 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  DLA  F+ ++++ +       +  ++ ++   RL LV A + ++   L 
Sbjct: 500 FEPSVIAKYALDLAKKFNKYYANVK-------ILTDDNQI-GARLALVQATSIVLTEALR 551

Query: 576 IIGVESPNEM 585
           ++GV +P EM
Sbjct: 552 LLGVNAPKEM 561


>gi|257081952|ref|ZP_05576313.1| arginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989982|gb|EEU77284.1| arginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 563

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 242/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIASELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++       +      L      W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFH----EEAEEKPKLEDEARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|282865622|ref|ZP_06274673.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282559666|gb|EFB65217.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 606

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 129/619 (20%), Positives = 221/619 (35%), Gaps = 66/619 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L+  L +       E    D ++    R         N  + L++ L  +
Sbjct: 18  MASVPSLASTLQQQLADALTAALPEAGTADPLL----RRSDRADFQANGILALAKKLKGN 73

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +   +     +  + ++G GF+N+ L+   + + L++    G   G  +    
Sbjct: 74  PRELAAKVTDTLPSGELIKDIEVSGPGFLNITLTDRAITETLAARAADGDRLGVPVKADA 133

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I++   N    MHVGH R AV+GD +  ++ F+G  V R ++I D G Q   L   
Sbjct: 134 GTTVIDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGETVVRRHHIGDWGTQFGMLIQY 193

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +F    +  +       E              L   Y +  + F  ++         V A
Sbjct: 194 LFEHPGELGHEGGEADGEAA---------MSSLNRVYKASRVLFDSDEEFKARSRDRVVA 244

Query: 241 MMKIIRDDLKALN--IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +     + L      +          F + D       I   +    + E      +   
Sbjct: 245 LQAGDPETLALWQGFVDESKIYFYSVFDKLDMEIRDADIVGESGYNDMLEETCRILEETG 304

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
                     + F      D    PL+  K++G Y Y A DL+  + + +    D ++YV
Sbjct: 305 VAVRSEGALCVFFDDVKGPDGNPVPLIVKKTNGGYGYAATDLSAIRDRVQGLKADTLLYV 364

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + +  S + K +   A         +    L     L +DG P K   R G  + L  ++
Sbjct: 365 VDARQSLHFKMVFETARRAGWLNEDVTAHQLAFGTVLGKDGKPFK--TREGTTVRLEDLL 422

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           DE                             VG  +V++  L         FD  ++   
Sbjct: 423 DEAVERATAVVREKAEKVGLSEEEIVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSL 482

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           + +  V Y+QYAYAR RSI R+A D  P              E E   +E  L +HL ++
Sbjct: 483 NGDTSV-YLQYAYARIRSILRKAGDANP----------AAHPELELAPAERALGLHLDQF 531

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+       EP+KLA YLY LAS     +   +          N  ++   RL LV  
Sbjct: 532 GAVLSEVAEGYEPHKLAAYLYQLASHLTTFYDQCQVLS-----DDNPAEVVENRLFLVEL 586

Query: 566 VASIINSGLNIIGVESPNE 584
            A  ++ G+ ++G+ +P  
Sbjct: 587 TARTLHQGMRLLGIRTPER 605


>gi|229150431|ref|ZP_04278647.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228632924|gb|EEK89537.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 562

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 135/613 (22%), Positives = 234/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     +            
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHELL------------ 277

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
               +     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 278 ----EQSEGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P++IE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|217959719|ref|YP_002338271.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222095806|ref|YP_002529863.1| arginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|217066344|gb|ACJ80594.1| arginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221239864|gb|ACM12574.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus
           Q1]
          Length = 562

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKL-SDPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ +      +R +  N       RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAE--KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|317123532|ref|YP_004097644.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315587620|gb|ADU46917.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 586

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 129/613 (21%), Positives = 233/613 (38%), Gaps = 83/613 (13%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
             I   +  + +  D ++    R      +  NAA+ L + +G  P  +A  IVA + +D
Sbjct: 14  SAIAAALGDDFREADPVL----RPSQFADVQVNAALALGKKVGAAPRDVAARIVAALDLD 69

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
              + V ++G GF+N+  S ++L  +L+ +           + +   + I++ + N    
Sbjct: 70  GVAEKVEVSGPGFVNITFSDAWLASLLADVDQDDRLGV--PVEEPQNIPIDYSAPNVAKE 127

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-DS 194
           MHVGH R  +VGD+LA  +   G+ V R+ +I D G     L   +    + +       
Sbjct: 128 MHVGHLRTTIVGDSLARTLEHLGHHVIRQNHIGDWGTPFGMLIEHLLEVGEDSPEAELLV 187

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-----VQAMMK------ 243
             P  +Y     K    E AD   S   +F       +VK  +     ++   +      
Sbjct: 188 TDPNAFYQAARAKFDAAEQADPDGSAG-DFDIRARARVVKLQAGDPETLEHWHRLVGMSK 246

Query: 244 -IIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                  +AL +    +    E  ++      + D+   L  +G           S    
Sbjct: 247 VYFNKVYQALGVTLGDENLAGESTYNH----LLADVCGELEAKGLA-------TVSDGAL 295

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
              +D       +   G  V   + KSDG Y Y   DLA  K +  + G   ++YV+G+ 
Sbjct: 296 CVFLDGY-----TGREGKPVPLIIRKSDGGYGYPTTDLATIKYRVGDLGAHRVLYVIGAP 350

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + ++  +   A         +  +  ++  +  +   I +  R+G  + L  ++DE   
Sbjct: 351 QALHLNMVWDTARLAGWLPDDVTPVHIQIGNVLGEDRKI-LKTRSGSSLRLMALLDEAVA 409

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V++  L   ++    FD  ++   +  N   
Sbjct: 410 KARGLIDETRPDLSEEERATIARQVGIGAVKYADLSVAHNSEYVFDLDRMVSLT-GNTGP 468

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QY  AR RSIFRQA          L P       +     E  L   L  +  V+   
Sbjct: 469 YLQYVVARVRSIFRQAG---------LDPLTQHAPITLGTPHERALGQQLLGFGDVVTEV 519

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP++L  YL++LA  F   + +         ++A   +L   RL L   V   + +
Sbjct: 520 GAEYEPHRLCGYLFELAQAFSAFYENC------PVLKAETPELRESRLTLSALVLRTMVT 573

Query: 573 GLNIIGVESPNEM 585
           GL+++G+ESP +M
Sbjct: 574 GLDLLGLESPEQM 586


>gi|163815005|ref|ZP_02206392.1| hypothetical protein COPEUT_01159 [Coprococcus eutactus ATCC 27759]
 gi|158449688|gb|EDP26683.1| hypothetical protein COPEUT_01159 [Coprococcus eutactus ATCC 27759]
          Length = 563

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 118/609 (19%), Positives = 241/609 (39%), Gaps = 76/609 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   + +    +     I     IE P     G  +      L++ +   P  IA 
Sbjct: 1   MKEKIAELISKNIEGVDASDIIAS---IEIPPRPDMGDYAF-PCFRLAKIMRKAPNMIAA 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I  +I     ++ + +AG  ++N Y+      K +     + + +G + +G G  + I+
Sbjct: 57  DIKEQIGDVDFIEKIDVAGA-YLNFYIKKDIFVKTMIE-AANSVNFGCSDLGDGQTICID 114

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           + S N     HVGH R  ++G++L  + +  GY+V R  ++ D G Q   L ++   W  
Sbjct: 115 YSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYKVVRINHLGDWGTQFGKLIVAYKAWGT 174

Query: 186 QQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMM 242
           ++A+  +  ++L + Y           EL D+  +        +E+ L I + +   +++
Sbjct: 175 KEAVEKDGIAELMKLYVKFHEEADKNPELVDEARAWFNKMENGDEEALSIWQWFKDISLV 234

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +     L +  D ++ E  +        + ++D +   G + E       S+     
Sbjct: 235 EY-KRTYNLLGMDFDYYLGESFY----RDKCQAVVDKVKAAGLLKE-------SEGAMIV 282

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           D+             D     + K DGS  Y   DLA    + +   F   +YV G +  
Sbjct: 283 DLSDY----------DMAPCIITKKDGSSIYATRDLAAIFYRKDTYNFSKCLYVTGQEQK 332

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            +  ++  V   +  + A+  ++      +  +G   K+S R+G+ I    ++ +     
Sbjct: 333 LHFAQVFKVVELLGNEWAKDQLVHIPYGLVSLEGA--KLSTRSGNIIYAEDILKDAIAKS 390

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               VG  +V F  L+ +  + + F + KV     E    YVQY
Sbjct: 391 LEIITEKSPNLPNKEDVAKKVGVGAVLFNDLYNQRIKDVSFSWNKVLNFDGE-TGPYVQY 449

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            +ARC S+ R        +D +      +  +   +   ++L+  +  +P VI++A    
Sbjct: 450 THARCCSVVR--------MDENFDSSAPVNYDLITEQDAIELLKEINRFPAVIKDAADKY 501

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +  D+A  F+  ++  R       +  ++R L   R+ L +   + I   LN+
Sbjct: 502 EPSIVARFAVDVAQAFNKFYNSTR-------INVDDRDLKNARVMLTYLTKNTIAEALNL 554

Query: 577 IGVESPNEM 585
           +G+E+P  M
Sbjct: 555 LGIEAPEAM 563


>gi|294494696|ref|YP_003541189.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665695|gb|ADE35544.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 567

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 142/614 (23%), Positives = 264/614 (42%), Gaps = 78/614 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           ++ +F +++ + L+    +   E   +       P    H  LST  A  L+      P+
Sbjct: 1   MYLEFVNQVVSVLENAVQRAGFEPVEIA------PEPSQHADLSTRVAFKLAAVARKSPV 54

Query: 63  TIAELIVAR--IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  IV    ++ +  ++S+   G  +IN+  + +Y+ +   ++     ++G N     
Sbjct: 55  EVANQIVENIQLRENCLIESIGTTGP-YINIKANRTYIDRTFETVRSKKEDFGGN--FYS 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E  SANP GP+HVGH R +++GDTL  ++  +GY+V  +YY+ND G QI  ++ +
Sbjct: 112 GKILLEHTSANPNGPLHVGHIRNSIIGDTLTRILRKAGYDVDAQYYVNDMGRQIAIVSWA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SV 238
           +          +D  +   Y           +   +Y   L+   E     ++K +  +V
Sbjct: 172 LEHFEMDPDLKSDHAIANVYIKANARLEEDSQKV-EYIDNLMQRVESGDEEVIKRFDDAV 230

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +K IR  L  +N+ HD F++E  F R     + DI+D + + G              
Sbjct: 231 DLAVKGIRSTLLRMNVHHDSFVNESGFVR--SGAVSDIVDKIRKTG-------------- 274

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             + D+D   L+   +  G +    + + DG+  Y   DLAY + K     D +I ++G+
Sbjct: 275 --RVDVDDGALVVDLSDYGFEKTLVVQRRDGTSLYTTRDLAYHEWK-TMQADRIIDILGA 331

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH     +L+A   AV  K+    +++ E V L        MS R G FIT   ++D+  
Sbjct: 332 DHKLISGQLKATLNAVGLKEP--EIVIFEFVSLPEG----SMSTRRGQFITADELLDKVQ 385

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  +VR+ ++     +   FD+    +  K+   
Sbjct: 386 ARAFEEVEKRRPEMSPEFMEKVAGMVGIGAVRYDIIKVSPEKSTVFDWKAALDFEKQG-G 444

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++QY++AR  SI ++A +            +V+      D SE+ LI  +A + +V++ 
Sbjct: 445 PFIQYSHARASSILKKAGEEGIWDPASKPNPSVLT-----DESEITLIKQIALFDKVLKQ 499

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P+ +A Y  +LA  F+  +           + A   +L   RL LV     ++ 
Sbjct: 500 AADDLKPHIIAIYGRELADAFNQFYRFS------PVLGAETEELRNARLGLVDCARIVLA 553

Query: 572 SGLNIIGVESPNEM 585
           + L  +G+ +P  M
Sbjct: 554 NVLETLGMGAPESM 567


>gi|168211451|ref|ZP_02637076.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170710582|gb|EDT22764.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 565

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 128/618 (20%), Positives = 241/618 (38%), Gaps = 92/618 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++      K + S  +  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLGP-YLNFFVDKVVFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADK---YSSELLNFPEE--KWLPIV 233
             ++AL     + P      +Y+K         EL D+   Y  +L +   E        
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDAEAVALWERF 230

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           KD S++   KI       L +  D +  E  ++      +  +++ L +   + E     
Sbjct: 231 KDLSLKEFNKI----YDMLGVDFDSWAGESFYN----DKMDTVVEELEKANILTE----- 277

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             S   +   +D   +              ++KSDG+  Y   DLA    +++   FD  
Sbjct: 278 --SNGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKC 325

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV+G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  
Sbjct: 326 IYVVGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLED 382

Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +++E                         +G  ++ F  L       + FD+ ++     
Sbjct: 383 LLNEAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDG 442

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           E    YVQY+YAR +SI R+A++     + D                E +L   L    +
Sbjct: 443 E-TGPYVQYSYARAKSILRKAEEQNITAEPDFT--------KLTSKEEFELAKTLEGLQK 493

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +       EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A
Sbjct: 494 AVILGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATA 547

Query: 568 SIINSGLNIIGVESPNEM 585
            +I + L +IG++   +M
Sbjct: 548 QVIKNALFLIGIDVVEKM 565


>gi|116671696|ref|YP_832629.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611805|gb|ABK04529.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 585

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/614 (21%), Positives = 238/614 (38%), Gaps = 80/614 (13%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
           +        ++  D   + RP       +  NAAM L++ +GL P   A  IV  +++D 
Sbjct: 7   QAAIAQAFGEEFRDTDPVVRP--SQFADIQVNAAMALAKKVGLPPRDAAARIVEALELDG 64

Query: 77  DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
              +V I+G GFINL    +++ ++L++              +  +V +++ S N    M
Sbjct: 65  LCTAVEISGPGFINLTFDGTWIEELLNAQASQPQGGPET---QARRVVVDYSSPNVAKEM 121

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-DSD 195
           HVGH R  VVGD+L  ++   G+ V R+ +I D G     L        + +       +
Sbjct: 122 HVGHLRTTVVGDSLVRVLEALGHTVIRQNHIGDWGTPFGMLIEHWLEIGEDSPEAALLVE 181

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-----KDYSVQAMMKIIRDDLK 250
            P  +Y     K       D       +F     L +V      + +++   +++     
Sbjct: 182 DPSAFYQAARAKF------DSSDGSPDSFATRARLRVVSLQSAHEETLEVWQRLVDHSKV 235

Query: 251 ALNIQHDIFIS--EDDFHRGDPS---PIRDIIDNLARQGY--VYEGILPPPKSKTTQKCD 303
             N  +       EDD   G+ S    +  +   L  +G   V EG L    +       
Sbjct: 236 YFNAIYATLGVSLEDDHIAGESSYDPHLAQLCQELEERGLARVSEGALCTFPAGFKG--- 292

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
                        G+ +   + KSDG Y Y   DLA  + +  E   D ++YV+G+  + 
Sbjct: 293 -----------RDGEPLPLIIRKSDGGYGYATTDLATIRYRVQELHADRILYVVGAPQNV 341

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           +++ +   A         +     ++   L  DG  +K   R+G  + L  +++E     
Sbjct: 342 HLRMVFETAREAGWLPDTVEATHVQIGNVLGEDGKILK--SRSGTPVKLMALLEEAVDRA 399

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V++  L   +     FDF ++   S  N   YV
Sbjct: 400 RAVVDSSRPDLSDEERAVTARQVGIGAVKYADLAVGHDTEYVFDFDRMLALS-GNTGPYV 458

Query: 455 QYAYARCRSIFRQAKDIFP---DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           QYA AR RSI R+A+       +              +  + +E  L +HL EY   +  
Sbjct: 459 QYAAARIRSILRKAEAAASPAGEPGEAAGEPTAAVSIAVVEPAERALALHLLEYGATLRK 518

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                EP++L  YL++L+ +F   +      P L+     +  +   RL L   V   ++
Sbjct: 519 VGELLEPHRLCAYLFELSQLFTSFYDQC---PVLK----ADESVRQSRLALCALVLHRLS 571

Query: 572 SGLNIIGVESPNEM 585
            GL+++G+E+P  M
Sbjct: 572 EGLDLLGIETPENM 585


>gi|33866849|ref|NP_898408.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932064|sp|Q7U3V8|SYR_SYNPX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33639450|emb|CAE08834.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 597

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 224/617 (36%), Gaps = 92/617 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L    S+ L   L+    +       +    +        G    N A+ L++PL   P 
Sbjct: 7   LMLSLSNTLDAQLRAAMQRAFPVADAVLDPQLAPASKPEFGDFQANGALPLAKPLKQAPR 66

Query: 63  TIAELIVARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IA  IV +++ D           IAG GFINL + P  L   +S+ +      G   + 
Sbjct: 67  QIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGD-ERLGVPAVE 125

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +   V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L 
Sbjct: 126 QAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHTVLRLNHVGDWGTQFGMLI 185

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
             +      AL   D+              +G +L   Y      F +++         V
Sbjct: 186 THLKQVAPDALETADA------------VDLG-DLVAFYREAKKRFDDDEAFQSTSREEV 232

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSK 297
             +       LKA  +  D         R +   I D +D  L  +G  +     P    
Sbjct: 233 VKLQGGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDIRLNERGESFYNPFLPAVID 285

Query: 298 TTQKCDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
             +  ++    D  Q +F   + G D   +   + KSDG + Y   DLA  + ++    D
Sbjct: 286 GLKAAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPD 345

Query: 351 -----NMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKR 403
                 ++YV  +  + +   +  VA         A++  +   LV+   DG   K+  R
Sbjct: 346 GDGARRVVYVTDAGQANHFAGVFQVAERAGWIPDGARLEHVPFGLVQ-GEDGK--KLKTR 402

Query: 404 AGDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNS 432
           AGD + LR ++DE                               VG  +V++  L +   
Sbjct: 403 AGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEEFIQNVAGTVGLAAVKYADLSQNRI 462

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++    + N   Y+ YA  R   I R+  D+               Q    +
Sbjct: 463 TNYQFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGGDLEVSTG----------QLQFSE 511

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A+ 
Sbjct: 512 PQEWALVRELLKFDSVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKADP 565

Query: 553 RKLTMMRLQLVHAVASI 569
             L   RL L    A  
Sbjct: 566 EAL-ASRLALCRLTADT 581


>gi|65319476|ref|ZP_00392435.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 562

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L + P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKXPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|229819128|ref|YP_002880654.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565041|gb|ACQ78892.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 593

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/610 (20%), Positives = 224/610 (36%), Gaps = 82/610 (13%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76
            +   I+    + D   + RP       +  NAA+ L++ +G  P  +A  +VA +  D 
Sbjct: 25  RVSAAIEAAFGLRDVDPVLRP--SQFADVQVNAALALAKQVGAPPRDVATRLVAALDADG 82

Query: 77  DVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
                   V ++G GF+N+ L   ++   + +   +G         +   V I++ + N 
Sbjct: 83  AFADVAAKVEVSGPGFLNITLRDDWIAAQVGAQ--AGDPRRGLPTPEPQVVPIDYSAPNV 140

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ----- 187
              MHVGH R  VVGD LA  +   G+ V R+ +I D G     L   +    +      
Sbjct: 141 AKEMHVGHLRTTVVGDALARTLEALGHRVVRQNHIGDWGTPFGMLIEHLLEVGEDSDAAR 200

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L  + +   +        +        +     L   +E  L I +      M+++ + 
Sbjct: 201 LLETDPNTFYQAARAKFDAEEGDFATRSRARVVALQGGDEATLAIWRR-----MIELSKH 255

Query: 248 DLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
               +    D+ +  D+   G+ +    +  I D L  +G                    
Sbjct: 256 YFNRIYTTLDVTL-RDEHLAGESTYDPMLEGICDELEAKGLA---------------VVS 299

Query: 305 DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
                +F     G D   +   + KSDG Y Y   DLA  K +  +   D ++YV+G+  
Sbjct: 300 QGALCVFPPGFTGRDGTPLPLIIRKSDGGYGYATTDLATIKHRAQDLHADRILYVVGAPQ 359

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS---------------KRAG 405
             ++  +  VA           V +     L  DG  +K                 +RAG
Sbjct: 360 HLHLSMIFEVARLAGWLGDTEPVHVQIGNVLGADGKILKTRSGAPIRLMALLEEAVERAG 419

Query: 406 DFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
             +              +  +VG  +V++  L   +     FDF ++      N   Y+Q
Sbjct: 420 AVVDAARGDLDDDERSAIARQVGIGAVKYADLSVAHDTEYVFDFDRMLAL-NGNTGPYLQ 478

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA AR  SIFR+A          L P +        + +E  L + L ++  V+ +    
Sbjct: 479 YAAARIYSIFRKAG---------LDPADARGAVVLGEPAERALGLALLDFGAVVGDVAAL 529

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P++L  YL++LA  F   +           + A   +L   RL L  AV   +  GL+
Sbjct: 530 LAPHRLCTYLFELAQAFTAFYDAC------PVLTAPTDELRASRLALTAAVLGTLVEGLD 583

Query: 576 IIGVESPNEM 585
           ++G+ +P  M
Sbjct: 584 LLGIAAPERM 593


>gi|196046133|ref|ZP_03113361.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023188|gb|EDX61867.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 562

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 136/613 (22%), Positives = 234/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFTLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKL-SDPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGVP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLEQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++ +V+E A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFSQVVEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|195041309|ref|XP_001991229.1| GH12545 [Drosophila grimshawi]
 gi|193900987|gb|EDV99853.1| GH12545 [Drosophila grimshawi]
          Length = 668

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 113/589 (19%), Positives = 223/589 (37%), Gaps = 79/589 (13%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
              G    N AM L + L        P  IA  I       P +  + +AG GFIN++LS
Sbjct: 116 SKFGDYQCNNAMGLVKKLKEAGINKSPREIAAEIQKCCPDSPIIKKIEVAGAGFINVFLS 175

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y    + +++  G++  R       +V ++F S N    MHVGH R  ++G++++ L+
Sbjct: 176 KEYAVNSIINMLRDGVKPPR---VPRKRVLVDFSSPNIAKQMHVGHLRSTIIGESISRLL 232

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +   +   +  +    DL E Y            
Sbjct: 233 EFMQHDVIRINHLGDWGTQFGMLIAHLEDCFPNFVNESPPIGDLQEFYKESKKRFDADDN 292

Query: 213 LADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRG 268
              +  + +++    + K          Q +  + R + + +  + D+ I+E    F++ 
Sbjct: 293 FKKRAYNRVVSLQSGDPKSTKAW-----QLICDVSRKEFQKIYDRLDVTITERGESFYQ- 346

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             S +  I++ L  +  +                ++D  + +  +      +   ++KSD
Sbjct: 347 --SRMLAIVELLRSKNLL----------------ELDEGREIMWTDDSKSGIPLTVVKSD 388

Query: 329 GSYTYFAADLAYFKCKYERGFD-NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC- 386
           G +TY  +D+A  + + E      +IYV+ S  S +   +   A         ++ +   
Sbjct: 389 GGFTYDTSDMAAIRHRIEEDLAIWIIYVVDSGQSTHFNTIFKAAERCGILNPNVHRVDHV 448

Query: 387 -ELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
              V L  DG   K   R+GD + L  ++DE                             
Sbjct: 449 QFGVVLGEDGK--KFKTRSGDTVKLSDLLDEGMKYSLKQLQERGRDQILTHTELVEAQEA 506

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           V    +++  L         F F K+ +  + N   Y+ Y Y R  SI R + + F ++ 
Sbjct: 507 VAYGCIKYTDLCHNRISDYVFSFEKMLD-DRGNTAVYLLYTYTRICSIARNSGEDFSNVA 565

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
             L   N+          E +L   L ++  V+         + L  + Y++ S F   +
Sbjct: 566 AILDKYNL----ELDHEKEWKLAKTLLKFHDVLIKCANGLFLHFLCEFCYEVCSAFTEFY 621

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +       K+   R+ +  A A+++ +   I+G+++  +M
Sbjct: 622 DSCYCIEKNK--DGKIIKINHSRILICEATAALLRTCFKILGLKTVAKM 668


>gi|189219458|ref|YP_001940099.1| Arginyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186316|gb|ACD83501.1| Arginyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 580

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 123/588 (20%), Positives = 232/588 (39%), Gaps = 70/588 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           ++E   + A G   +N A IL++ L  +P  +AE +   I   P +    + G GF+N  
Sbjct: 28  IVEPCTNPAFGDFQSNIAFILAQSLKANPKNLAEELARSIGESPFIFPPEVGGSGFLNFK 87

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P        + + S    G     +   + I+F S N    +HVGH R  ++GD L  
Sbjct: 88  VKPKAYLDTFLA-IRSDPRLGIEQTKQPQTIVIDFSSPNIAKELHVGHLRSTILGDVLRK 146

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK-HVG 210
           L  F G+ V  + ++ D G Q   + L    +   + L     +  E  Y  +  +    
Sbjct: 147 LNLFLGHRVITDNHLGDWGTQFGMVILGYKKYGRPELLTQRPLEYLEELYIKIQKESDES 206

Query: 211 KELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            ++ ++   EL      + +   + + + VQA +  +    + LN++ D  + E  ++  
Sbjct: 207 TQIREEAKKELQKLQSGDPENRSLWERF-VQASLGELDKIYQRLNVKFDFSLGESFYNPM 265

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326
               +  I++ L ++G                    +    +F      +  D PLL  K
Sbjct: 266 ----LEGIVEQLLQKGIARYS---------------EGAVCVFFGKSFPELEDNPLLIRK 306

Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           SDG++ Y   D+A    +++  G   +IYV  S    +  +L A+A  ++    ++  + 
Sbjct: 307 SDGAFLYATTDIATLFFRFQNWGAHRIIYVTDSRQKLHFNQLFALAQILAL-PVRLEHVH 365

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
              + L  D  P+K   R G  + LR ++DE                           VG
Sbjct: 366 FGSI-LGEDKKPLK--TREGTPVKLRELLDEAENRAYQLIDAKRKDLSPEKKQHIARAVG 422

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++  L +  +    F + K+      N   Y+  A+ R RSI ++A        + 
Sbjct: 423 IGALKYADLSQNRTLDYVFKWEKLLSFD-GNTAPYLINAHVRIRSIMKKASLHGY---YS 478

Query: 479 LFPRNVIPQESE-FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                 +  E+E     E++L+  L  +   +  A+    P+ L  +LY LA VFH  + 
Sbjct: 479 TLGFTSLKFETEALHPQEIELLRTLLSFKYALCLASEENSPHHLCSFLYALAKVFHKFYE 538

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     + A    +   R+      A  ++ GLN++G+E  +EM
Sbjct: 539 LC------PVLGAPTEPIRQRRMAFCECTAQTLSLGLNLLGIEPLDEM 580


>gi|149198116|ref|ZP_01875163.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138718|gb|EDM27124.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 587

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 125/622 (20%), Positives = 244/622 (39%), Gaps = 79/622 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--- 59
           L A    ++   +  +   I+++  IL        ++   G    N +M L+  LG    
Sbjct: 4   LLAQLRDKVSLAVSAVAGDIEIKGAILV-----PSQNPKFGDYQCNVSMELAGKLGKARG 58

Query: 60  ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  I+ ++++    +   IAG GFIN  L    L     +++      G   
Sbjct: 59  EKVNPRQVATAIMEKLEVSELSEEPEIAGPGFINFKLKNDVLADYAITMLRD-ERLGIAK 117

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +    +V ++F   N    MHVGH R  ++GD++A  M F G+EV R  ++ D G Q   
Sbjct: 118 VANPERVLVDFSGPNLAKEMHVGHLRSTIIGDSVARFMEFEGHEVLRMNHVGDWGTQFGM 177

Query: 177 LALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWL 230
           L   +      AL N +    +DL + Y     +     E  D     +++    +E  L
Sbjct: 178 LIQFIRTTRPGALENPENFEIADLEDFYREAKKMFDESDEFKDAARRAVVDLQSGDEATL 237

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + K +  ++ +K   +    L+I+      E  ++      ++D++++L   G   +  
Sbjct: 238 AVWKVFCEES-LKHCHEIYGQLDIKISD-RGESAYN----DMLKDVVEDLKSAGKAEQ-- 289

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349
                ++      +D  +         + +   + KSDG Y Y   DLA  + ++ E+  
Sbjct: 290 -----TEGAWGVFLDGYK-----NKDDEPLPTIVQKSDGGYIYATTDLAAIRYRFAEQKT 339

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D +IYV  +    +  ++  ++  +          +   + L  DG P K   R G  + 
Sbjct: 340 DKLIYVTDARQKTHFDQVFEISELMDWAPKDSMRHIGFGMMLGADGKPFK--TRTGGTVK 397

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L+ ++ E                            G   V++  L    +    FD+ K+
Sbjct: 398 LKDLLAEAESRAGELARELTPGLSEEEYKEIAFAAGLGGVKYSDLSHGVATDYKFDWNKM 457

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              +  N   Y+   +AR R + R+A      +D D    +        +  E++LI  +
Sbjct: 458 L-ATDGNTAIYILMTFARTRGLSRKAG-----VDVDSL-VDATDLARLTEEQEIKLIKKI 510

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A  P V +       P+ L  +LY+LA  F   W+          ++  + +L   RL L
Sbjct: 511 ASTPDVWQGVVRDLAPHLLLNHLYELARDFGSFWNSC------PIMKLEDEELKQSRLAL 564

Query: 563 VHAVASIINSGLNIIGVESPNE 584
              V  ++  GL+++G+++ ++
Sbjct: 565 AGGVGRVLKWGLSMVGIQTLDK 586


>gi|229029913|ref|ZP_04185982.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228731421|gb|EEL82334.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 562

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 133/613 (21%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G ++      L++     P  IA
Sbjct: 2   DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDDFGDVAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    EYG+N  G    V 
Sbjct: 59  KEVAKKL-SNPFFTKVEAVGP-YVNVFFNREIVSDAVLKTVLAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKIGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKRNIEEKNPNLKQKEEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV++P EM
Sbjct: 550 GLRLLGVDAPEEM 562


>gi|283778010|ref|YP_003368765.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436463|gb|ADB14905.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 651

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/673 (21%), Positives = 235/673 (34%), Gaps = 110/673 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L      R    L  ID        +L   +I   +D   G    N AM L   LG  
Sbjct: 1   MNLIELLRQRFAVSLATIDSDTA---PLLA--MIRPSQDAKFGDYQANFAMPLKAKLGKA 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  ++A  K+D   +   +AG GFINL    S+L + L ++ VS  + G     + 
Sbjct: 56  PQQIAADVIAATKLDDLCEPATVAGPGFINLKFRDSWLEERL-NLAVSDPQLGIAPTAQP 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               ++F S N   PMHVGH R  V+GD+L  ++   G+ V  + ++ D G Q   +   
Sbjct: 115 RTYIVDFSSPNVAKPMHVGHIRSTVIGDSLCKILRALGHHVVSDNHLGDWGTQFGMIIYG 174

Query: 181 VFWRYQ-QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW---------- 229
           +      QA  ++        Y  V+     +E      +        +           
Sbjct: 175 IKHFADTQAYKSSPVKELGRLYKLVHKLVDYRESLAAIPTTQEKLAAREAELATASNQPP 234

Query: 230 --------LPIVKDYSVQAMMKIIRDDLKALN---------------------IQHDIFI 260
                           +Q  +K  R+ L AL                      I  D+  
Sbjct: 235 SADKAVAKKAAQALAKLQLQVKEQREALAALQSKIAAMDADPLLSKLVQAHPTIDADVLA 294

Query: 261 SEDDFHRGDP--------------SPIRDIIDNL-----ARQGY-VYEGILPPPKSKTTQ 300
                H GD                 I+ I   L        G   Y   L         
Sbjct: 295 ETAKLHAGDSENRQIWHEVLPFCREEIQRIYKRLSVTFDEELGESFYHDRLEKVVDDLAA 354

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
           K      Q      + G D    + K DG++ Y   DLA  + + ER   D + YV+   
Sbjct: 355 KGLARESQGATAVFLEGFDAPMLVRKRDGAFLYATTDLATIQYRQERWKPDAIWYVVDHR 414

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +L   A A       +  +    V L  DG P K   R+GD + L  ++DE   
Sbjct: 415 QSEHFDKLFIAAKAWGYTNTDLTHVKFGTV-LGDDGKPFK--TRSGDTVGLDGLLDEAIS 471

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  ++++  L +  +    F + K+  Q   N   
Sbjct: 472 RALAIVQSSSSDLSPEEQQQVAERVGIGALKYADLSQNRTSDYTFSYDKML-QMNGNTAT 530

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QY+YAR RSIF +      ++D      +     +  + +E  L + L  +   +  A
Sbjct: 531 YMQYSYARVRSIFSRG-----NIDIAALRTSGA-LIALTEPAERALGLSLLRFEEALAEA 584

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YL+DLA  +   + +       + ++A++      RL L    A  I  
Sbjct: 585 VATAMPHHLTTYLFDLAKSYSTFFENC------KVLKADDEATKNSRLLLCDLTARTIKH 638

Query: 573 GLNIIGVESPNEM 585
           GL+++G++    M
Sbjct: 639 GLSLLGIDVVERM 651


>gi|227515597|ref|ZP_03945646.1| arginine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086027|gb|EEI21339.1| arginine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|299783442|gb|ADJ41440.1| Arginine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 562

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/609 (22%), Positives = 253/609 (41%), Gaps = 81/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             ++ + L+++   + VE        +ERP+D  +G  +      L++ L   P  IA  
Sbjct: 4   RQQVASALQKVLPNLSVEDLEAK---LERPKDAKNGDYAFPTFF-LAKELHKAPQMIASE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V +AG  +IN +L  + +  +IL++++     YG   +G    V I+
Sbjct: 60  LAEQIDQSG-FEKVVVAGP-YINFFLDKASVGGEILAAVLADPANYGSTDLGHQGHVTID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   PM +GH R  V+G+ +A+++A   Y   R  ++ D G Q   L  +   W  
Sbjct: 118 LSSPNIAKPMGMGHLRSTVIGNAIANILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGD 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           +  +  +  +  + YY  +  +       D    E    L   + +   + K +   ++ 
Sbjct: 178 EAEVQKDPINTLQKYYVKINTEADEHPEYDDLGREWFAKLEQGDPEAQRLWKWFREVSLQ 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + ++     L+I  D F  E  ++      + +++  L  +  + E       S+  +  
Sbjct: 238 RFMKI-YNLLDIDFDSFNGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEII 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHS 361
           D+++  L              + KSDGS  Y   DLA     K        +YV+G++ S
Sbjct: 286 DLEKYDL----------NPAMIRKSDGSTLYLTRDLAAALFRKRMYHHAQSLYVVGAEQS 335

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
            +  +L+AV + +    +     +   +         KMS R G+ I L  V+       
Sbjct: 336 NHFAQLKAVLSEMGFTWSDQIHHIPFGLMSLNGK---KMSTRKGNIIQLEDVLNDSIKLA 392

Query: 415 ------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                             +EVG  +V F  L  + +  +DF   +V +   E    YVQY
Sbjct: 393 RQQIEEKNPTLANADQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGE-TGPYVQY 451

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI R+A        F+     V  QE+       ++   + +Y   I  A    
Sbjct: 452 AHARAESILRKAGRP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEY 501

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +  Y   LA  F+ +++H R       ++ +++KL   RL LV AV+ ++ S L +
Sbjct: 502 DPSLIGKYALSLAKSFNQYYAHTR------ILEEDDQKL--SRLALVQAVSDVLKSALAL 553

Query: 577 IGVESPNEM 585
           +GV++P+EM
Sbjct: 554 LGVKAPDEM 562


>gi|159475080|ref|XP_001695651.1| hypothetical protein CHLREDRAFT_119290 [Chlamydomonas reinhardtii]
 gi|158275662|gb|EDP01438.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 589

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 134/623 (21%), Positives = 234/623 (37%), Gaps = 93/623 (14%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG------ 58
           A+ +   ++ L        +E       V+    +  +G    N AM L   L       
Sbjct: 12  AEVADLFRSALNTAYPNAGIEP------VVAACNNAKNGDYQCNNAMALFGKLKGTENAP 65

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
             P  +A  I+A +  +  +    +AG GFIN+ L+   L + + S++  G+        
Sbjct: 66  KAPRDVANAILAALPANDLISETSLAGPGFINIRLNKDALARRVGSMLTDGLAKFAPEGH 125

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV I+F S N    MHVGH R  ++GDTL  +  + G +V R  ++ D G Q   L 
Sbjct: 126 AGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVLRLNHVGDWGTQFGMLI 185

Query: 179 LSVFW--RYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             +    + + A  + D +DL E Y          +E   +    +          +   
Sbjct: 186 EHMADTRKARDADKDEDVADLQELYRAAKKRFDEEEEFKTRAREAVTRLQSGDATSL--- 242

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            S Q +    R + +AL  +  + + E      +P  ++ I+D L   G           
Sbjct: 243 ASWQRICAASRREFEALYTRLGVTLQERGESFYNP-MLKGIVDGLKETGVATID------ 295

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                    D    +F   + G  V   + KSDG + Y + D+A    +  E   D +IY
Sbjct: 296 ---------DGATCVF---VEGQSVPLIVQKSDGGFGYASTDMAALHHRLNEEKADWIIY 343

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKK----AQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           V     S + + +   A      K     +++ +   LV L  DG   +   R+GD + L
Sbjct: 344 VTDVGQSQHFELVFGAAKKAGWLKEAAGPKVSHVGFGLV-LGEDGK--RFRTRSGDLVRL 400

Query: 411 RHVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             ++DE                               +G  +V++  L    +    F F
Sbjct: 401 VELLDEAKSRCAATIRERRQEAGEEIVEAEVEEAACAMGYGAVKYADLKNHRTTNYKFSF 460

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +    K N   Y+ YA+AR   I R+          D++        +     EL+L 
Sbjct: 461 DDMLNL-KGNTAVYLLYAHARIAGIVRKGG-------KDVYALAASTPVTLEHPKELELA 512

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           +HL + P  +E+A     P ++  YLYDL+  F+  +   +       V  + ++    R
Sbjct: 513 LHLTKLPEALEDAIEELAPNRITDYLYDLSEKFNSFYVDCK-------VLGSEQE--ASR 563

Query: 560 LQLVHAVASIINSGLNIIGVESP 582
           L LV A A ++     ++G++  
Sbjct: 564 LLLVEATAVVMRKCFELLGIKPL 586


>gi|229178575|ref|ZP_04305939.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228604733|gb|EEK62190.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 562

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 236/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFVESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P+VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|47221361|emb|CAF97279.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 697

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/657 (21%), Positives = 250/657 (38%), Gaps = 111/657 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + + RL+     +  +    +     + +   +    G    N+AM ++     + + ++
Sbjct: 75  NINQRLQEVFG-LAIRTSFPELENPPLALAPNQQPKFGDYQCNSAMAMAQMLKAKGVKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +    IAG GFIN++L  S++ K+LS ++++G++       K 
Sbjct: 134 PREIAERITRNLPDNELIQKTEIAGPGFINIHLKRSFVSKLLSKLLINGVKPPPLASRK- 192

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V ++F S N    MHVGH R  ++GD+++ L  F G++V R  ++ D G Q   L   
Sbjct: 193 -RVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  ++   L  +    P G            +L   Y      F E++         V  
Sbjct: 252 LQDKFPDYLTASP---PIG------------DLQAFYKESKKRFDEDEAFKKRAYQCVVK 296

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTT 299
           +     D +KA N+  D+        R +   I D +D  +  +G  Y   L     K  
Sbjct: 297 LQSKEPDFIKAWNLICDV-------SRQEFQKIYDCLDIKIIERGESYYQDLMTDVVKEA 349

Query: 300 QK---CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
           +      +D  + +  +   G  +   ++KSDG YTY  +DLA  + + +E   D +IYV
Sbjct: 350 EDRGFVQLDEGRKIIFAP--GQSLPLTVVKSDGGYTYDTSDLAALRQRLFEEKADTIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSE--------KKAQINVLLCELVRLYR-------------- 393
             S    + + + A A  +          + A   V+L E  RL R              
Sbjct: 408 TDSGQGSHFQVVFAAAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQRSRNRIRHRYPAPTS 467

Query: 394 --------------DGMPIKMSKRAGDFITLRHVVDEVGSD------------------- 420
                         +    K   R+G+ + L  ++DE                       
Sbjct: 468 VLGLRAADVSSALPNLPRKKFKTRSGETVRLMDLLDEGLKRSMDKLKEKERDQVLTADEL 527

Query: 421 -------SVRFMMLWRKNSEL----LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  ++R   + R   +       F F K+ +  + N   Y+ YA+ R RSI R A 
Sbjct: 528 VKAQRAVALRLHQVRRPFPQPHLTTYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA- 585

Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               ++D     +     E   +   E +L   +  +P ++         + L  YLY+L
Sbjct: 586 ----NIDEATLRKEAASTEILLEHEKEWKLGKCILRFPEILVKILDDLLLHSLCDYLYEL 641

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A+ F   +       + R       K+ M R+ L  A A+I+    +I+G+     M
Sbjct: 642 ATTFTEFYDSCYCVEKDRQ-TGEVVKVNMWRMLLCDATAAIMAQCFHILGLNPVERM 697


>gi|218234429|ref|YP_002366898.1| arginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218162386|gb|ACK62378.1| arginine--tRNA ligase [Bacillus cereus B4264]
          Length = 562

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/613 (22%), Positives = 233/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     +            
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHELL------------ 277

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
               +     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 278 ----EQSEGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P EM
Sbjct: 550 GLRLLGVGAPEEM 562


>gi|229167047|ref|ZP_04294791.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228616400|gb|EEK73481.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 562

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 133/613 (21%), Positives = 231/613 (37%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +  I +    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N+  + E     ++  +V      K + EL       W   ++   + +V+  
Sbjct: 174 ---KKWGNEEFVKEDPIRELFKLYVQFHEEAKENKELEEEG-RSWFKKLEEGNEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+      + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNDKMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEKEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYEFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 VALAEQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL L + V  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQAFNKYYGNVR-------ILEENEE-KESRLALAYTVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|110798607|ref|YP_696348.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110673254|gb|ABG82241.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 565

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 242/615 (39%), Gaps = 86/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   +KE    + +E + +++ +IE P     G  +      L++ +   P  IA
Sbjct: 2   DYKKLVAERIKE---HVDLELENIEK-LIEIPPKPEMGDFAF-PCFQLAKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +  +I  +   + V   G  ++N ++   ++ + I+S ++  G +YG + IG+G  V 
Sbjct: 57  AELAEKINKEG-FERVECLG-SYLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           +E+ S N   P HVGH     +G +L  ++ F GY   R  ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGHSLYRMLNFEGYNPIRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             ++AL     + P      +Y+K         EL D+           +++ + + + +
Sbjct: 175 GNEEAL----EEAPINELLRIYVKFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L +  D +  E  ++      +  +++ L +   + E       S
Sbjct: 231 K-DLSLKEFNKIYDMLGVDFDSWAGESFYN----DKMDTVVEELEKANILTE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              ++KSDG+  Y   DLA    +++   FD  IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G D   +  ++         + A+  V +   +  + D    K+S R G+ + L  +++
Sbjct: 329 VGKDQILHFNQVFKTLELAGNEWAKNCVHIPFGLVKFADR---KLSTRKGNVVLLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L       + FD+ ++     E  
Sbjct: 386 EAIDKTRETIEEKNPQLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR +SI R+A++     + D                E +L   L    + + 
Sbjct: 445 GPYVQYSYARAKSILRKAEEQNITAEPDFT--------KLTSKEEFELAKTLEGLQKAVI 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP  +  Y  ++A  F+  +++         +   +  L   RL+L+ A A +I
Sbjct: 497 LGIDKLEPSVVTRYSIEVAKAFNKFYNNHT------VLNVEDEGLKAARLELIKATAQVI 550

Query: 571 NSGLNIIGVESPNEM 585
            + L +IG++   +M
Sbjct: 551 KNALFLIGIDVVEKM 565


>gi|257090658|ref|ZP_05585019.1| arginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312905196|ref|ZP_07764317.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256999470|gb|EEU85990.1| arginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310631586|gb|EFQ14869.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315579134|gb|EFU91325.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 563

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 243/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I++ L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVNLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|257066823|ref|YP_003153079.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798703|gb|ACV29358.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 565

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 134/611 (21%), Positives = 241/611 (39%), Gaps = 75/611 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   +   L+++D  +  E+      +IE P     G  S      L++ L  +P  
Sbjct: 1   MTDFKEIIAKQLEKMDLGLSFEEIYK---LIEIPPQDNMGDYSF-PCFSLAKTLRKNPAI 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE +     +D   + +      ++N Y+    +  +IL  I+    +YG +  G G  
Sbjct: 57  IAEDLAKGFDLDG-FEKIENLNA-YLNFYVDRKVFEEEILKEILEKKEKYGSSDKGNGKN 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSV 181
           + I+F S N   P H+GH R  V+GD L ++  F GY      YI D G Q    +A   
Sbjct: 115 IVIDFSSVNIAKPFHIGHIRSTVIGDALRNIHDFLGYNTIASNYIGDYGTQFGTMIAAYK 174

Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSV 238
            W  ++ L  N   +L   Y          +++ D+  +E +N    EE+   + K +  
Sbjct: 175 LWGDEEKLKENPIKELLALYVRYNSEAANDEKMMDEARAEFMNLENGEEEATRLWKHFKE 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +  +  R   K L+I  D +  E          I D+++ L  +  + E       S  
Sbjct: 235 ISFNEFDRV-YKMLDIDFDNYNGES----YHSEFIPDVLEELKEKNLLVE-------SDG 282

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG 357
               D+             D     ++KS+GS  Y   D+A    + +   FD  +YV+ 
Sbjct: 283 AYIVDLSE----------FDLPPAIIIKSNGSSAYITRDIATAINRKKVYDFDKNLYVVA 332

Query: 358 SDHSGYVKRLEAVAAAVSEK-----------------------KAQINVLLCELVRLYRD 394
           +  + + ++L A+   +                          K Q+ V L +++    D
Sbjct: 333 TQQNLHFQQLFAILKLMGYDFYDDCKHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAID 391

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                M  R      +  V + VG  +V+F  L+    +   FD+ +V     E    YV
Sbjct: 392 KTKEIMENRDSKIENVGEVAEIVGIGAVKFQELYNNRIKDYVFDWDEVLNFDGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +S+ R+A         D      I  ++     E  L+  L  +  V+  A  
Sbjct: 451 QYTYARAKSVLRKA---------DFKENTEISFDNITSDEEFALVKALGNFKDVVAKAAE 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  +L ++A  F+  ++  +       +   + K+   RL L +A + +I +GL
Sbjct: 502 KYEPSLITRHLTEIAKNFNKFYNACQ-------INVEDEKIKEERLALSYATSIVIKTGL 554

Query: 575 NIIGVESPNEM 585
            ++G+++  +M
Sbjct: 555 GLLGIKTVEQM 565


>gi|104773879|ref|YP_618859.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123378467|sp|Q1GAN1|SYR_LACDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|103422960|emb|CAI97631.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 565

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/608 (22%), Positives = 238/608 (39%), Gaps = 76/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L+ +     ++      + IERP+D   G  +      L++ +   P  IA  
Sbjct: 4   KQLVAEALQAVLPDWSLDD---IDVKIERPKDEKLGDYAFP-TFTLAKTMRKAPNLIAAE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V   G  +IN +L  S     IL  I+     YG   +G G  V  E
Sbjct: 60  LAEKIDQ-GSFEKVEAVGP-YINFFLDKSQTGAAILQEILADPENYGARDLGHGRNVLTE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRY 185
           + S N   PM +GH R  ++G+ +A ++A  G++  R  Y+ D G Q    +A    W  
Sbjct: 118 YSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMK 243
              +  +  +    YY  +  +       D+   E  +  E  ++    +  +  +  ++
Sbjct: 178 DADIEKDPINTLLSYYVRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L++  D F  E          +   I  L  +G +        KS+  +  D
Sbjct: 238 RFKKVYDMLDVHFDSFTGEAF----SAQMMDKPIQILREKGLL-------VKSQGAEIVD 286

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +++  L              ++KS+G+ TY   DLA    + +  GF   IYV+G +   
Sbjct: 287 LEKYNL----------PPLMVIKSNGTSTYITRDLATAMYRKKTYGFYKSIYVVGQEQEV 336

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           Y ++L A    +    A   V +   +         KMS R G+ + L  V++E      
Sbjct: 337 YFQQLRACLKEMGFDWADDIVHISFGLMSING---QKMSTRKGNVVNLEDVLNESVDLAR 393

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       +DF+  +V +   E    YVQYA
Sbjct: 394 KQISEKNVGLKNADEVAKQVGIGAVVFHDLKNYRRNPIDFNLEEVVKFEGE-TGPYVQYA 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR  S+ R++       DF       I  E      E  L+  +A Y   I+ A    +
Sbjct: 453 RARGESLLRKSGIT----DFSDADLTKIGAE------EWDLVSFMARYADTIQKAMETYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++
Sbjct: 503 PSAIAKYALELAKRFNKYYAHTRIL-----VDDVDEDVKKARLAVVQAVSHVIKSALDLL 557

Query: 578 GVESPNEM 585
            V++P+EM
Sbjct: 558 DVKAPDEM 565


>gi|254432045|ref|ZP_05045748.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626498|gb|EDY39057.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 604

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/585 (22%), Positives = 215/585 (36%), Gaps = 93/585 (15%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS----VFIAGKGFINLYLS 94
               G    N A+ L++PL   P  IA  IV ++K DP          IAG GFINL L 
Sbjct: 43  KPEFGDFQANGALPLAKPLKQPPRAIATAIVEQLKADPTFAELCGEPQIAGPGFINLTLR 102

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           P  L   ++  +        +  G G      V ++F S N    MHVGH R  ++GD L
Sbjct: 103 PERLAAEVAERLADPRLGVPSAAGPGGEEPAPVVVDFSSPNIAKEMHVGHLRSTIIGDAL 162

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A ++ F G+ V R  ++ D G Q   L   +     +AL   D+              +G
Sbjct: 163 ARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADA------------VDLG 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +L   Y      F  ++         V  +       LKA  +  D         R + 
Sbjct: 211 -DLVAFYRQAKARFDADEAFQATSREEVVKLQGGDPVSLKAWGLLCDQ-------SRREF 262

Query: 271 SPIRDIID-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFR--STMVGDDVDR 322
             I D +D  L+ +G  +     E ++   ++      D   + +     S   G  +  
Sbjct: 263 QKIYDRLDIRLSERGESFYNPYLEAVVADLEAAGLLVTDAGARCVFLEGVSGKDGQPLPV 322

Query: 323 PLLKSDGSYTYFAADLAYFKCKY-----ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
            + KSDG + Y   DLA  + ++       G   +IYV  +  + +   +  VA      
Sbjct: 323 IVQKSDGGFNYATTDLAAIRYRFAPPPQGDGARRVIYVTDAGQASHFAGVFQVARRAGWV 382

Query: 378 K--AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
              A++  +   LV+   DG   K+  RAGD + LR ++DE                   
Sbjct: 383 PTGARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLQEEERT 439

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V++  L +       F F ++    + N   Y+ YA  R   I
Sbjct: 440 EDEAFIEHVATTVGLAAVKYADLSQNRITNYQFSFDRMLAL-QGNTAPYLLYAVVRIAGI 498

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  D+   ++      +        +  E  L   L ++  V+        P +L  Y
Sbjct: 499 ARKGGDLEGAVEASSLRFS--------EPQEWALARELLKFDAVVAEVEEELLPNRLCSY 550

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           L++L+ VF+  +       ++  ++A   ++   RL L    A  
Sbjct: 551 LFELSQVFNRFYD------QVPVLKAE-PEVRAARLALCRLTADT 588


>gi|227519810|ref|ZP_03949859.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227072748|gb|EEI10711.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 563

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 247/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++ ++V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANRDEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H      +R +  +++     RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAH------VRILDEDDQ--KGARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|228955955|ref|ZP_04117891.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228803735|gb|EEM50418.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 562

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 236/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|75760440|ref|ZP_00740481.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218897175|ref|YP_002445586.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228900799|ref|ZP_04065014.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|74492065|gb|EAO55240.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218545741|gb|ACK98135.1| arginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228858725|gb|EEN03170.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 562

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 236/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKKYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFMKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|15894328|ref|NP_347677.1| arginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|23822201|sp|Q97K78|SYR_CLOAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15023953|gb|AAK79017.1|AE007619_9 Arginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508456|gb|ADZ20092.1| arginyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 563

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/611 (21%), Positives = 242/611 (39%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   + +I   + ++ + L +I IE P     G  +       ++ L   P  IA
Sbjct: 2   DYKKVIAERINKI---VDMDVEALYKI-IEIPPKKDMGDFAL-PCFQFAKVLRKAPNAIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +I      + V   G  +IN ++  + + ++ + S++     YGR+ +G+G KV 
Sbjct: 57  EEVCKKIDQSG-FEKVENLGP-YINFFVDKADFAKETIESVLSERDNYGRSKVGEGKKVL 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           IE+ S N   P HVGH    V+G +L  + +  GY+  R  ++ D G Q   L  +   W
Sbjct: 115 IEYSSPNIAKPFHVGHLFGTVLGSSLYKIFSMEGYDCVRINHLGDWGTQFGKLISAYKRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQA 240
             + ALY +        Y   + +     L +         L   E++ + +   +    
Sbjct: 175 CDEDALYKDPIKELLRIYVKFHKEAEKDPLLEDEGRMYFKRLEDGEKEEVELWTKFK-DL 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++  +     + ++ D +  E  +       I  I + L  +G + E       S   +
Sbjct: 234 SLREFKKVYNQIGVEFDSYTGESFY----SDKIDAIEEELNEKGLLTE-------SNGAK 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              +D   +              + K+DG+  Y   DLA  + + +   FD  IYV+G +
Sbjct: 283 VVMLDEYNM----------PPCIIKKADGASIYATRDLAAAEYRKKTYNFDKSIYVVGLE 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K+          + ++  + +   +  + +G   K+S R GD I L  ++ E   
Sbjct: 333 QSLHFKQFLKTLELAGHEWSKDCIHVGYGLVRFAEG---KLSTRNGDVIFLEDLLKESVQ 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L       + FD+ ++     E    YV
Sbjct: 390 KTSEIIEEKNPELDNKEEVSRKVGIGAVIFTYLKNGRERDIIFDWKEMLSFEGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY+YAR +SI R+  ++  ++ +D                E  LI  L  +   I NA  
Sbjct: 449 QYSYARAKSILRKLGEVKGNVSYD----------KLVSAEEFDLIKQLKGFNGAILNAID 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  Y+ ++A  F+  ++             ++ +L   RL LV A + +I + L
Sbjct: 499 RLEPSVITRYVIEVAKAFNKFYNA------YNISNTSDEELKNARLALVEAASIVIKNAL 552

Query: 575 NIIGVESPNEM 585
           ++IG++   EM
Sbjct: 553 SLIGIDVVEEM 563


>gi|49477538|ref|YP_036321.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81396232|sp|Q6HJF5|SYR1_BACHK RecName: Full=Arginyl-tRNA synthetase 1; AltName:
           Full=Arginine--tRNA ligase 1; Short=ArgRS 1
 gi|49329094|gb|AAT59740.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 562

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKL-SDPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             +A+   D   P      +Y++   +   D+     L      W   ++   + +V+  
Sbjct: 177 GNEAVVKED---PIRELFKLYVQFHEEVTDDEE----LEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG+ +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKDEVAKQVGAGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFTLK-----------DDHSWNIVKLLNKFPKVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 CNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|161507929|ref|YP_001577893.1| arginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348918|gb|ABX27592.1| Arginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 561

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/606 (21%), Positives = 244/606 (40%), Gaps = 72/606 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I   +  D +  S+   G  ++N  +    L       V+S  E+  +       + I
Sbjct: 57  QDIAENLSSD-NFASIKAVGP-YVNFAIDHEKLVSSTLKDVLSEKEHYGDQKFGEGNIPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMM 242
            ++ +  +       YY   + +       D    E     E+     VK +    +  +
Sbjct: 175 NEEDVKKDPIMNLFHYYVRFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSL 234

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q  
Sbjct: 235 EDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVV 283

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS 361
           DM             D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ +
Sbjct: 284 DMG-----------PDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQA 332

Query: 362 GYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIK 399
            +   L+ V   +    +                           L ++++        +
Sbjct: 333 QHFVELKTVLKKMGYDWSDEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKKQ 392

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  A
Sbjct: 393 IEEKNPDLADKDQVAHDVGVGAVIFHDLKNDRLDNFDFDLDEVV-RFEGDTGPYVQYTNA 451

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R +S+ R+A  +        F  +        D     +   LA++PR+I  +    EP 
Sbjct: 452 RAQSVLRKAAAMGEKPSEGDFALD--------DDWAFAVAKDLADFPRIIARSADKFEPS 503

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++GV
Sbjct: 504 VIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTEALRLLGV 555

Query: 580 ESPNEM 585
            +P EM
Sbjct: 556 NAPKEM 561


>gi|271970123|ref|YP_003344319.1| arginine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270513298|gb|ACZ91576.1| Arginine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 584

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 127/621 (20%), Positives = 229/621 (36%), Gaps = 86/621 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + R++  L         +   L        R         N AM LS+ L   P  +A+
Sbjct: 8   LTERVQQALAAAFGTDYADADPLI-------RPSQFADYQANVAMSLSKRLRRAPREVAQ 60

Query: 67  LIVARI-------KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            I   +       + D    +V ++G GF+N+ LS  ++ +  + ++      G      
Sbjct: 61  EIADHLSGRAEGTQGDAFPGTVEVSGPGFLNITLSDDWIAEQTAEVMAD-PRSGVAQATP 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I++ + N    MHVGH R  +VGD LA +    G +V R+ ++ D G     L  
Sbjct: 120 PQTVVIDYSAPNAAKEMHVGHLRTTIVGDALARVHEHLGNKVIRQNHLGDWGTPFGMLIE 179

Query: 180 SVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS- 237
            +       A+   ++     YY     K       ++ +   +   + +    ++ +  
Sbjct: 180 HLLDIGEATAVAQLEAGEGNAYYQAARAKFDTDPEFNQRARTRVVTLQAEEPETMRLWHI 239

Query: 238 -VQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            + A ++        L +    D    E  ++      +  + D L  +G          
Sbjct: 240 FMDATVRYFNKVYSQLGVTLTDDDIAGESMYNHM----LARVCDELQERGIA-------- 287

Query: 295 KSKTTQKCDMDRKQLLFRSTMVG-DDVDRP--LLKSDGSYTYFAADLAYFKCKY-ERGFD 350
                     D    +F     G +D   P  + KSDG Y Y   D+A    +  +   D
Sbjct: 288 -------VVSDGALCVFPPGFTGREDQPLPFMIRKSDGGYGYATTDMATIHYRVQDLKVD 340

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM-SKRAGDFIT 409
            ++YV+G+  + ++  L A A         +     ++  +   G   KM   R+G+ I 
Sbjct: 341 RILYVIGATQALHMSMLFASARMAGWLPDHVRAEHVQIGSVL--GSDGKMFKTRSGESIK 398

Query: 410 LRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L  ++DE                         VG  +V++  L   +     FDF ++  
Sbjct: 399 LLDLLDEAETRAAAVLAGRDYDDAARAEIGHAVGMGAVKYADLSVSHDSEYVFDFDRMLA 458

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            +  N   Y+QYA AR RSIFR+A         D+ P            +E  L + +  
Sbjct: 459 LT-GNTGPYLQYATARIRSIFRKA---------DVAPATATGPILLGHPAERALALQVLG 508

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  +++       P+KLA YL++ ASVF   + +    P L+     +      RL L  
Sbjct: 509 FGSIVDEVAEGSMPHKLAAYLFETASVFTTFYENC---PVLK--DDVDPATRASRLALCA 563

Query: 565 AVASIINSGLNIIGVESPNEM 585
               ++ +GL+++GV  P  M
Sbjct: 564 LTLRVLETGLDLLGVPVPERM 584


>gi|229017498|ref|ZP_04174399.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229023712|ref|ZP_04180204.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228737637|gb|EEL88141.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228743822|gb|EEL93923.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 562

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKTQFAKSLSNIFTNELTKNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +  ++L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLN-DPFFTKVEAVGP-YVNIFFNRETVSDEVLKTILAKKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             +A+   D   P      +Y++   +       +E L      W   ++   + +V+  
Sbjct: 177 GNEAVVKED---PIRELFKLYVQFHEEVKE----NEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 VALAEQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL+++GVE+P EM
Sbjct: 550 GLHLLGVEAPEEM 562


>gi|86741395|ref|YP_481795.1| arginyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568257|gb|ABD12066.1| arginyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 598

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/625 (20%), Positives = 235/625 (37%), Gaps = 95/625 (15%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++++  +     ++  E    D +V    R   H    +NAA+ L++     P  +A  +
Sbjct: 21  NQVEIAVSAAIDRVLPEAAGADPVV----RPSEHADFQSNAALALAKRARTKPADLATAV 76

Query: 69  VARIKIDPDVD--SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
              ++ D       V ++G GF+NL L+ + +   +++ +      G +L  +  +  I+
Sbjct: 77  ADALRADGSTAVADVTVSGPGFLNLALADATVWTQVAARLAD-PRLGIDLPEQSRRTVID 135

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N    MHVGH R  ++GD LA ++ F G EV R+ ++ D G Q   L   +   + 
Sbjct: 136 YSGPNIAKEMHVGHLRTTIIGDALARVLGFLGAEVIRQNHLGDWGTQFGMLIQYL-DEHP 194

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-----KDYSVQAM 241
            A +++D   P      V         A K       F +     +V      + +V   
Sbjct: 195 DATWHSDDLAP--GTSTVSALDSLYRAARKEFDADPGFADRARARVVALQAGDEDTVARW 252

Query: 242 MKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +I+ +   A    +D             E  ++      + DI+D L   G        
Sbjct: 253 REIVAESEVAFRQIYDRLGVLLEPSDSAGESFYN----DRLLDIVDELTAAGIAQ----- 303

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK-YERG 348
                     D +   ++    + G D D     + K+DG Y Y   DLA  + +  +  
Sbjct: 304 ----------DSEGALVVLSQEVTGPDGDPATLMVRKTDGGYGYDTTDLATIRYRIRDLH 353

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDF 407
            D ++YV+ +  + + + +   A         ++V  +     L  DG P K   RAGD 
Sbjct: 354 ADRLLYVVDARQALHFRLVFETARRAGWLTDAVDVAHVAFGTVLGPDGRPFK--TRAGDT 411

Query: 408 ITLRHVVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFC 440
           + L  ++D                             G  +V++  L    ++   FD  
Sbjct: 412 VKLMDLLDAATGKARATVAEKDHALTDDDLDHIAEAAGIGAVKYADLSTSRTKDYVFDVD 471

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++      N   Y+QYA+ R +SI R+A D+   +D  L              +E  L +
Sbjct: 472 RMVSFD-GNTGVYLQYAHTRIQSILRKAGDMTATVDVALA----------LHPAERALAL 520

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +   +       EP++L  YLY+LA  F   +           V   +      RL
Sbjct: 521 QLDAFGGALTEVARLLEPHRLCNYLYELARAFTDFYEAC-------PVLQADPSTRANRL 573

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L H  A  +  GL+++G+ +P  M
Sbjct: 574 ALCHLTARTLRQGLDLLGIAAPERM 598


>gi|269123117|ref|YP_003305694.1| arginyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314443|gb|ACZ00817.1| arginyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 572

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/612 (21%), Positives = 237/612 (38%), Gaps = 73/612 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKK-ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
               +   L  ++  IK      L  + I+       G   TN AM  ++ LG +P  +A
Sbjct: 1   MKILINQVLDILNENIKKSYDFELTELDIQNATKKEFGDYQTNFAMQKAKMLGKNPRELA 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +V        +  V +AG GFIN +++   L +    I     EYG +       V I
Sbjct: 61  NDVVENFDGKGVISKVEVAGPGFINFFINTDLLNQETEKIGKENYEYGISNE---KIVAI 117

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           ++ S N    MH GH R  ++GD L  +    G+ V  + +I D G Q   L ++   W 
Sbjct: 118 DYSSPNIAKRMHAGHLRSTIIGDALKRIYRELGFTVYGDNHIGDWGTQFGKLIVAYNNWL 177

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL---NFPEEKWLPIVKDYSVQAM 241
            + A   N  +  E  Y     K       ++ + E L      +     + K++   ++
Sbjct: 178 DKDAYEANAIEELERIYVLFSQKAKEDPTLEEKAREELRKVQAGDPVNYALWKEFITSSL 237

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  +   K L+I+ ++F  E  ++   P     +++ L  +                 K
Sbjct: 238 REYDKV-YKRLDIEFELFNGESFYNEMMP----KVLEKLKEK--------------EIAK 278

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            D     + F +  +       + K D S+ Y  +DLA    +  E   D  IYV+    
Sbjct: 279 QDQGALVVFFPNDELP---PCIVQKKDNSFLYSTSDLATIVYRKDELNVDIAIYVVDERQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
           S + K++  +A  +              +  + DG     S R GD I L  ++      
Sbjct: 336 SDHFKQVFKIAEMLGSPYNYDKYHTKFGIMRFGDGTI--FSTRGGDVIRLEDILNKAKER 393

Query: 415 ---------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                + VG  ++++  L +  +  + F + KV    + N   Y
Sbjct: 394 VQEIVDEKNPELSQEEREYIAETVGVGAIKYFDLSQNRTSGITFTWDKVLSF-EGNTGPY 452

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY+Y R  S+ R+AKD+  + +   F  +        D S+  L+V L + P  +  + 
Sbjct: 453 LQYSYVRIMSMLRKAKDLGIEFENSKFLVDG------SDISDRNLVVSLHKLPTAVIKSY 506

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
            +  P  +A Y+Y L   F+  ++  +       +  +N +LT  RL L    A +I   
Sbjct: 507 ESNRPNLIAEYIYSLTKEFNSFYNAHQ------VIDKDNLELTKARLALCEKTALVIKKA 560

Query: 574 LNIIGVESPNEM 585
           L+++G+ + ++M
Sbjct: 561 LSLLGIRTVDKM 572


>gi|229161178|ref|ZP_04289165.1| Arginyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228622274|gb|EEK79113.1| Arginyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 562

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/613 (22%), Positives = 234/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDDFGDAAF-PCFSLAKQYKKSPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAEKLD-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAEKGEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             +A+   D   P      +Y++    E   +     L      W   ++   + +V+  
Sbjct: 177 GNEAVVKED---PIRELFKLYVQF--HEEVKEDGE--LEEDGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +  K     +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYKWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IGLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  
Sbjct: 498 FHKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV++P EM
Sbjct: 550 GLRLLGVDAPEEM 562


>gi|313123500|ref|YP_004033759.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280063|gb|ADQ60782.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 565

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/608 (22%), Positives = 239/608 (39%), Gaps = 76/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L+ +     ++      + IERP+D   G  +      L++ +   P  IA  
Sbjct: 4   KQLVAEALQAVLPDWSLDD---IDVKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V   G  +IN +L  S     IL  I+     YG   +G G  V+ E
Sbjct: 60  LAEKIDQ-GSFEKVEAVGP-YINFFLDKSQTGAAILREILADPENYGARDLGHGRNVSTE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRY 185
           + S N   PM +GH R  ++G+ +A ++A  G++  R  Y+ D G Q    +A    W  
Sbjct: 118 YSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMK 243
              +  +  +    YY  +  +       D+   E  +  E  ++    +  +  +  ++
Sbjct: 178 DADIEKDPINTLLSYYVRINREAEEHPEYDEEGREWFSKLEHGDEEAKRLWSWFREVSLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L++  D F  E          + + I  L  +G +        KS+  +  D
Sbjct: 238 RFKKVYNMLDVHFDSFTGEAF----SAQMMDEPIQILREKGLL-------VKSQGAEIVD 286

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +++  L              ++KS+G+ TY   DLA    + +  GF   IYV+G +   
Sbjct: 287 LEKYNL----------PPLMVIKSNGTSTYITRDLATAMYRKKTYGFYKSIYVVGQEQEV 336

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           Y ++L A    +    A   V +   +         KMS R G+ + L  V++E      
Sbjct: 337 YFQQLRACLKEMGFDWADDIVHISFGLMSING---QKMSTRKGNVVNLEDVLNESVDLAR 393

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       +DF+  +V +   E    YVQY+
Sbjct: 394 KQISEKNVGLKNADEVAKQVGIGAVVFHDLKNYRRNPVDFNLEEVVKFEGE-TGPYVQYS 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR  S+ R++       DF       I  E      E  L+  +  Y   I+ A    +
Sbjct: 453 RARGESLLRKSGIT----DFSDADLTKIGAE------EWDLVSFMGRYADTIQKAMETYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++
Sbjct: 503 PSAIAKYALELAKRFNKYYAHTRIL-----VDDVDEDVKKARLAVVQAVSHVIKSALDLL 557

Query: 578 GVESPNEM 585
            V++P+EM
Sbjct: 558 DVKAPDEM 565


>gi|315144839|gb|EFT88855.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 563

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 246/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKKAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H      +R +  +++     RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAH------VRILDEDDQ--KEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|229545112|ref|ZP_04433837.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229309777|gb|EEN75764.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1322]
          Length = 563

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 243/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +   +    +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEENPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|29376964|ref|NP_816118.1| arginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554005|ref|ZP_03984052.1| arginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256963634|ref|ZP_05567805.1| arginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307271575|ref|ZP_07552847.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|38372516|sp|Q831N1|SYR_ENTFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29344429|gb|AAO82188.1| arginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176829|gb|EEI57801.1| arginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256954130|gb|EEU70762.1| arginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306511847|gb|EFM80845.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|315574745|gb|EFU86936.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315580914|gb|EFU93105.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327535755|gb|AEA94589.1| arginine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 563

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 242/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|257421892|ref|ZP_05598882.1| arginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163716|gb|EEU93676.1| arginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315155401|gb|EFT99417.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 563

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 247/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +  + +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFEWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H      +R +  +++     RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAH------VRILDEDDQ--KEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|109894992|sp|Q2J9H6|SYR_FRASC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 588

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/625 (20%), Positives = 235/625 (37%), Gaps = 95/625 (15%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++++  +     ++  E    D +V    R   H    +NAA+ L++     P  +A  +
Sbjct: 11  NQVEIAVSAAIDRVLPEAAGADPVV----RPSEHADFQSNAALALAKRARTKPADLATAV 66

Query: 69  VARIKIDPDVD--SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
              ++ D       V ++G GF+NL L+ + +   +++ +      G +L  +  +  I+
Sbjct: 67  ADALRADGSTAVADVTVSGPGFLNLALADATVWTQVAARLAD-PRLGIDLPEQSRRTVID 125

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N    MHVGH R  ++GD LA ++ F G EV R+ ++ D G Q   L   +   + 
Sbjct: 126 YSGPNIAKEMHVGHLRTTIIGDALARVLGFLGAEVIRQNHLGDWGTQFGMLIQYL-DEHP 184

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-----KDYSVQAM 241
            A +++D   P      V         A K       F +     +V      + +V   
Sbjct: 185 DATWHSDDLAP--GTSTVSALDSLYRAARKEFDADPGFADRARARVVALQAGDEDTVARW 242

Query: 242 MKIIRDDLKALNIQHDIF---------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +I+ +   A    +D             E  ++      + DI+D L   G        
Sbjct: 243 REIVAESEVAFRQIYDRLGVLLEPSDSAGESFYN----DRLLDIVDELTAAGIAQ----- 293

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK-YERG 348
                     D +   ++    + G D D     + K+DG Y Y   DLA  + +  +  
Sbjct: 294 ----------DSEGALVVLSQEVTGPDGDPATLMVRKTDGGYGYDTTDLATIRYRIRDLH 343

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDF 407
            D ++YV+ +  + + + +   A         ++V  +     L  DG P K   RAGD 
Sbjct: 344 ADRLLYVVDARQALHFRLVFETARRAGWLTDAVDVAHVAFGTVLGPDGRPFK--TRAGDT 401

Query: 408 ITLRHVVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFC 440
           + L  ++D                             G  +V++  L    ++   FD  
Sbjct: 402 VKLMDLLDAATGKARATVAEKDHALTDDDLDHIAEAAGIGAVKYADLSTSRTKDYVFDVD 461

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++      N   Y+QYA+ R +SI R+A D+   +D  L              +E  L +
Sbjct: 462 RMVSFD-GNTGVYLQYAHTRIQSILRKAGDMTATVDVALA----------LHPAERALAL 510

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +   +       EP++L  YLY+LA  F   +           V   +      RL
Sbjct: 511 QLDAFGGALTEVARLLEPHRLCNYLYELARAFTDFYEAC-------PVLQADPSTRANRL 563

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L H  A  +  GL+++G+ +P  M
Sbjct: 564 ALCHLTARTLRQGLDLLGIAAPERM 588


>gi|229069737|ref|ZP_04203022.1| Arginyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228713358|gb|EEL65248.1| Arginyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 562

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 236/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|260103236|ref|ZP_05753473.1| arginine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260082949|gb|EEW67069.1| arginine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 561

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 128/606 (21%), Positives = 244/606 (40%), Gaps = 72/606 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I   +  D +  S+   G  ++N  +    L       ++S  E+  +       + I
Sbjct: 57  QDIAENLSSD-NFASIKAVGP-YVNFAIDHEKLVSSTLKDILSEKEHYGDQKFGEGNIPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMM 242
            ++ +  +       YY   + +       D    E     E+     VK +    +  +
Sbjct: 175 NEEDVKKDPIMNLFHYYVRFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSL 234

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q  
Sbjct: 235 EDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVV 283

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS 361
           DM             D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ +
Sbjct: 284 DMG-----------PDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQA 332

Query: 362 GYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIK 399
            +   L+ V   +    +                           L ++++        +
Sbjct: 333 QHFVELKTVLKKMGYDWSDEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAISLAKKQ 392

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  A
Sbjct: 393 IEEKNPDLADKDQVAHDVGVGAVIFHDLKNDRLDNFDFDLDEVV-RFEGDTGPYVQYTNA 451

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R +S+ R+A  +        F  +        D     +   LA++PR+I  +    EP 
Sbjct: 452 RAQSVLRKAAAMGEKRSEGDFALD--------DDWAFAVAKDLADFPRIIARSADKFEPS 503

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++GV
Sbjct: 504 VIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTEALRLLGV 555

Query: 580 ESPNEM 585
            +P EM
Sbjct: 556 NAPKEM 561


>gi|73668541|ref|YP_304556.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|109895000|sp|Q46DR6|SYR_METBF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72395703|gb|AAZ69976.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 569

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/614 (22%), Positives = 265/614 (43%), Gaps = 76/614 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +  ++  + LK+   K  +E +    +  E     ++  L++ AA  L+     +P 
Sbjct: 1   MFLELKAQATSILKDAIQKAGLEIED-SELYFET---SSYADLASRAAFRLASLYRQNPK 56

Query: 63  TIAELIVAR--IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  IV+   I     +  V  +G  +IN + S  Y+ K +++++    ++G       
Sbjct: 57  ELATRIVSAVEIPDGSYIGKVSASGP-YINFHASRRYMDKTVATVLEEKEKFGCGAPKD- 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E  SANP GP+HVGH R +++GDTLA ++  +GY+V  +YY+ND G QI  ++ +
Sbjct: 115 -KILLEHTSANPNGPLHVGHIRNSIIGDTLARILRRAGYDVEVQYYVNDMGRQIAVVSWA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SV 238
                      +DS + + Y           E   +    L+   E   +  +  +  +V
Sbjct: 174 CERFELDLSRKSDSAIADVYIKANVELDKNPEYVKEI-DALMEKVEAGDVKTIDSFYKAV 232

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  I++ L  LN+ HD F+SE  F +     + DI++ +   G              
Sbjct: 233 SLAISGIKETLLRLNVVHDKFVSESTFLK--SGAVHDIVERIKATG-------------- 276

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             +   D+  L+   +  G      + +S+G+  Y   DLAY + K  +  D +I + G+
Sbjct: 277 --RTKTDKGALVVDLSDYGFKKTLVIQRSNGTSLYTTRDLAYHEWKAGQ-ADRIIDIFGA 333

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV----- 413
           DH     +L A   ++  K+    V++ E V L        MS R G FI+   +     
Sbjct: 334 DHKLISGQLRATLNSIGVKEP--EVVIFEFVSLPEG----SMSTRRGQFISADELFDRVT 387

Query: 414 ----------------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                  + VG  +VR+ ++     +   F++ +  +  K+   
Sbjct: 388 EAALEQVETRRPETSEEFKKQVAEMVGIGAVRYDIVRVSPEKSTVFNWKEALDFEKQG-A 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QY++AR  SI  +AK+     +        I      + +E+ LI  +A + RVI+ 
Sbjct: 447 PYIQYSHARACSILEKAKE-----EAAWNSSAEIDPSLLVEDTEIDLIKKMASFDRVIDL 501

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P+ LA Y  +LA  F+  +        +  + A + K+   RL LV+    ++ 
Sbjct: 502 AARELKPHVLAIYARELADAFNQFY------RFVPVIAAEDEKVRASRLALVNCARIVLA 555

Query: 572 SGLNIIGVESPNEM 585
           + L+ +G+ +P  M
Sbjct: 556 NSLDTLGIAAPESM 569


>gi|21227450|ref|NP_633372.1| arginyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|23822188|sp|Q8PX74|SYR_METMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|20905820|gb|AAM31044.1| Arginyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 569

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/614 (23%), Positives = 259/614 (42%), Gaps = 76/614 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +  ++  + LKE   K   E +    +  E      H  L++ AA  L+     +P 
Sbjct: 1   MFLELKAQATSILKEAIRKAGFEVED-SELQFETSP---HADLASRAAFRLAGIHRQNPK 56

Query: 63  TIAELIVAR--IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  IV+   I     +  V  AG  +IN +    YL   +++++    ++G       
Sbjct: 57  DLASRIVSAVEIPEGSFIGKVSAAGP-YINFFAGKHYLNGTVNAVLKEKEKFGCGAPKD- 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +E  SANP GP+HVGH R +++GDTLA ++  +GY+V  +YY+ND G QI  ++ +
Sbjct: 115 -RILLEHTSANPNGPLHVGHIRNSIIGDTLARILRRAGYDVEVQYYVNDMGRQIAVVSWA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSV 238
                      +DS + + Y               +    L+   E   +  ++  D +V
Sbjct: 174 CERFELDLSRKSDSAIADVYIKANVELDKNPGYIKEI-DALMEKVEAGDVRTIEHFDKAV 232

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  I++ L  LN+ HD F+SE  F +     + DI++ +   G              
Sbjct: 233 SLAVAGIKETLLRLNVAHDKFVSESTFLK--SGAVHDIVERIKATG-------------- 276

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             +   D+  L+   +  G +    + +S+G+  Y   DLAY + K  +  D +I V G+
Sbjct: 277 --RTKTDKGALVVDLSDYGFEKTLVIQRSNGTSLYTTRDLAYHEWKAGQ-ADRIIDVFGA 333

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV----- 413
           DH     +L A   A+  K+    V++ E V L        MS R G FI+   +     
Sbjct: 334 DHKLISGQLRATLNAIGVKEP--EVVIFEFVSLPEG----SMSTRRGQFISADDLFDRVT 387

Query: 414 ----------------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                  + VG  +VR+ ++     +   F++ +  +  K+   
Sbjct: 388 GAAFEQVETRRPETSYEFKKQVAEAVGLGAVRYDIVRVSPEKSTVFNWKEALDFEKQG-A 446

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QY++AR  SI  +AK+     +    P   I      + SE+ LI  +A +  VI+ 
Sbjct: 447 PYIQYSHARACSILEKAKE-----EAAWNPDKEIDPSLLVEDSEIDLIKKMAMFDSVIDL 501

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                +P+ LA Y  +LA  F+  +        +  + A +  +   RL LV     ++ 
Sbjct: 502 GARELKPHVLAIYARELADAFNQFY------RFVPVIAAEDENVRAARLALVDCARVVLA 555

Query: 572 SGLNIIGVESPNEM 585
           + L+ +G+ +P  M
Sbjct: 556 NSLDTLGIIAPESM 569


>gi|315174024|gb|EFU18041.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 563

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 242/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIASELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|300812690|ref|ZP_07093099.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496317|gb|EFK31430.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 565

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/608 (22%), Positives = 239/608 (39%), Gaps = 76/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L+ +     ++      + IERP+D   G  +      L++ +   P  IA  
Sbjct: 4   KQLVAEALQAVLPDWSLDD---IDVKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V   G  +IN +L  S     IL  I+     YG   +G G  V+ E
Sbjct: 60  LAEKIDQ-GSFEKVEAVGP-YINFFLDKSQTGAAILQEILADPENYGARDLGHGRNVSTE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRY 185
           + S N   PM +GH R  ++G+ +A ++A  G++  R  Y+ D G Q    +A    W  
Sbjct: 118 YSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMK 243
              +  +  +    YY  +  +       D+   E  +  E  ++    +  +  +  ++
Sbjct: 178 DADIEKDPINTLLSYYVRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L++  D F  E          + + I  L  +G +        KS+  +  D
Sbjct: 238 RFKKVYDMLDVHFDSFTGEAF----SAQMMDEPIQILREKGLL-------VKSQGAEIVD 286

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +++  L              ++KS+G+ TY   DLA    + +  GF   IYV+G +   
Sbjct: 287 LEKYNL----------PPLMVIKSNGTSTYITRDLATAMYRKKTYGFYKSIYVVGQEQEV 336

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           Y ++L A    +    A   V +   +         KMS R G+ + L  V++E      
Sbjct: 337 YFQQLRACLKEMGFDWADDIVHISFGLMSING---QKMSTRKGNVVNLEDVLNESVDLAR 393

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       +DF+  +V +   E    YVQY+
Sbjct: 394 KQISEKNVGLKNADEVAKQVGIGAVVFHDLKNYRRNPIDFNLEEVVKFEGE-TGPYVQYS 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR  S+ R++       DF       I  E      E  L+  +  Y   I+ A    +
Sbjct: 453 RARGESLLRKSGIT----DFSDADLTKIGAE------EWDLVSFMGRYADTIQKAMETYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++
Sbjct: 503 PSAIAKYALELAKRFNKYYAHTRIL-----VDDVDEDVKKARLAVVQAVSHVIKSALDLL 557

Query: 578 GVESPNEM 585
            V++P+EM
Sbjct: 558 DVKAPDEM 565


>gi|256961238|ref|ZP_05565409.1| arginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257416704|ref|ZP_05593698.1| arginyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|293383522|ref|ZP_06629432.1| arginine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387365|ref|ZP_06631921.1| arginine--tRNA ligase [Enterococcus faecalis S613]
 gi|307287653|ref|ZP_07567696.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312906072|ref|ZP_07765084.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909418|ref|ZP_07768273.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256951734|gb|EEU68366.1| arginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257158532|gb|EEU88492.1| arginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|291079034|gb|EFE16398.1| arginine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083263|gb|EFE20226.1| arginine--tRNA ligase [Enterococcus faecalis S613]
 gi|306501391|gb|EFM70694.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|310627718|gb|EFQ11001.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290091|gb|EFQ68647.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|315032650|gb|EFT44582.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315164876|gb|EFU08893.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 563

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 243/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++ ++V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|260663474|ref|ZP_05864364.1| arginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552015|gb|EEX25068.1| arginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 562

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/609 (22%), Positives = 253/609 (41%), Gaps = 81/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             ++ + L+++   + VE        +ERP+D  +G  +      L++ L   P  IA  
Sbjct: 4   RQQVASALQKVLPNLSVEDLEAK---LERPKDAKNGDYAFPTFF-LAKELHRAPQVIASE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V +AG  +IN +L  + +  +IL++++     YG   +G    V I+
Sbjct: 60  LAEQIDQSG-FERVVVAGP-YINFFLDKASVGGEILAAVLADPANYGSTDLGHQGHVTID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   PM +GH R  V+G+ +A+++A   Y   R  ++ D G Q   L  +   W  
Sbjct: 118 LSSPNIAKPMGMGHLRSTVIGNAIANILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGD 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           +  +  +  +  + YY  +  +       D    E    L   + +   + K +   ++ 
Sbjct: 178 EAEVQKDPINTLQKYYVKINTEADEHPEYDDLGREWFAKLEQGDPEAQRLWKWFREVSLQ 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + ++     L+I  D F  E  ++      + +++  L  +  + E       S+  +  
Sbjct: 238 RFMKI-YNLLDIDFDSFNGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIV 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHS 361
           D+++  L              + KSDGS  Y   DLA     K        +YV+G++ S
Sbjct: 286 DLEKYDL----------NPAMIRKSDGSTLYLTRDLAAALFRKRMYHHAQSLYVVGAEQS 335

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
            +  +L+AV + +    +     +   +         KMS R G+ I L  V+       
Sbjct: 336 NHFAQLKAVLSEMGFTWSDQIHHIPFGLMSLNGK---KMSTRKGNIIQLEDVLNDSIKLA 392

Query: 415 ------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                             +EVG  +V F  L  + +  +DF   +V +   E    YVQY
Sbjct: 393 RQQIEEKNPTLANADQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGE-TGPYVQY 451

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI R+A        F+     V  QE+       ++   + +Y   I  A    
Sbjct: 452 AHARAESILRKAGRP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEY 501

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +  Y   LA  F+ +++H R       ++ +++KL   RL LV AV+ ++ S L +
Sbjct: 502 DPSLIGKYALSLAKSFNQYYAHTR------ILEEDDQKL--SRLALVQAVSDVLKSALAL 553

Query: 577 IGVESPNEM 585
           +GV++P+EM
Sbjct: 554 LGVKAPDEM 562


>gi|123965451|ref|YP_001010532.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123199817|gb|ABM71425.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 602

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/637 (19%), Positives = 230/637 (36%), Gaps = 92/637 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI--LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ + + R +  L E   K + +++   + + +I +      G    N  ++LS+    +
Sbjct: 4   IYQELTKRFEETLLESLIKNEKKEEFENIRKNLINQASKEEFGDYQCNICLVLSKIYKRN 63

Query: 61  PLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVV---SGIEYG 113
           P  IA   V ++K + +     +++ IAG GFIN+ L  + L   + S +    +G+   
Sbjct: 64  PREIAIEFVQKLKENKEISNLCEALEIAGPGFINIKLKNNLLIAKIKSNIKCPRAGVPLS 123

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
            N      KV ++F S N    MHVGH R  ++GD++A +    GY V R  ++ D G Q
Sbjct: 124 NNNSHSQKKVIVDFSSPNIAKEMHVGHLRSTIIGDSIAKIFELRGYTVLRLNHVGDWGTQ 183

Query: 174 INTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEE 227
              L   +   Y   L   D    SDL E Y           E   +   E++     ++
Sbjct: 184 FGMLITQLKDLYSSDLREIDKITISDLVEFYKASKKRFDNETEFKKRSREEVVKLQSGDK 243

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K +   K      +    R +   +    +I I E      +P  ++ II++L  +  + 
Sbjct: 244 KSIKAWK-----LLCNQSRKEFDEIYKILNIKIKERGESFYNP-FLKSIIEDLTFKKILV 297

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
           E                   + +F    +   G+ +   + K DG + Y   DLA  + +
Sbjct: 298 ED---------------QGAKCVFLHGMTNKEGNPLPLIIKKKDGGFNYATTDLAALRYR 342

Query: 345 YER-----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           + +         +IYV     S +   +  VA   +       V       L +     K
Sbjct: 343 FRKEPHGDNATRIIYVTDHGQSNHFAGVFQVAKRANWIPEDCEVNHVPFG-LVQGIDGKK 401

Query: 400 MSKRAGDFITLRHVVDE-------------------------------VGSDSVRFMMLW 428
           +  R GD I L+ ++ E                               +G  +V++  L 
Sbjct: 402 LKTREGDIIKLKDLLSESIKRAKEDLLKRLEKESRFETEEFILNTSKVIGIGAVKYADLS 461

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +       F F K+      N   Y+ Y   R   I R+      +++ D      I   
Sbjct: 462 QNRITNYQFSFEKMLSL-NGNTAPYLLYTLVRISGINRKN-----NMNEDAVNSESIAYS 515

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
            +    E +LI  L ++  VI +      P +L  YL++L   F+  +            
Sbjct: 516 HDL---EWKLIRKLLKFDEVIVSIEKDLMPNRLCNYLFELCQSFNRFYDQVSILKV---- 568

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + RL L       +   L ++G++S   M
Sbjct: 569 ---EMNTKISRLTLCALTEKTLKLSLELLGIDSLERM 602


>gi|221134747|ref|ZP_03561050.1| arginyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 577

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 121/620 (19%), Positives = 233/620 (37%), Gaps = 78/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A    R           +         + + +      G    N AM L++ L   
Sbjct: 1   MNIQAILVERF-------STALAKLDAADAAVPVSKSTRPEFGEYQFNGAMGLAKRLRCS 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+  + +D   +   IAG GFIN++LS  +L +  S ++              
Sbjct: 54  PRDVAQQILDVVDLDGIAEQCEIAGPGFINIHLSSQWLAQQASRVLADERLGIETQPQ-- 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD +A  + F G+ V R+ ++ D G Q   L   
Sbjct: 112 QNIVVDYSAPNLAKEMHVGHLRSTIIGDAVAKALEFMGHNVLRQNHMGDWGTQFGMLLAH 171

Query: 181 V--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +    +  +      SDL + Y          +  AD+    ++     ++  L + +++
Sbjct: 172 LNDKLQANEVAETALSDLEDFYRQAKVRFDAEEGFADRAREYVVKLQGGDDACLALWQNF 231

Query: 237 SVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   +    +  + LN+    +  + E  ++      + ++I +L  QG   E      
Sbjct: 232 -IDVSIAHSEEVYEKLNVSLTREHVMGESAYNPD----LANVISDLQAQGVAVE------ 280

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
                Q   +D       +   G      + KS G Y Y   DLA  + + ++      +
Sbjct: 281 -DAGAQVVFLDE-----LADKNGKPAVYIVQKSGGGYLYATTDLAAIRYRKQQLAAHRTL 334

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRH 412
               +  + + K+ E VA       A      C   + L +DG P K   R G  + L  
Sbjct: 335 IFTDARQALHFKQTEIVARKAGFLAADEQYQHCPFGMMLGKDGKPFK--TRTGGTVKLID 392

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++DE                           +G  +V++  L +  +    FD+  +   
Sbjct: 393 LLDEAVERAQTLLATRDNDFSADTLADMANKIGIGAVKYADLSKNRTTDYIFDWDAMLSF 452

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+QYA+ R +SIF +A     +   ++               E  L   L +Y
Sbjct: 453 -EGNTAPYLQYAFTRIQSIFNKANVTLENCRENIVINA---------PQEKALATKLLQY 502

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +E       P+ L  YLY+LAS++   +      P L+     +      RL L   
Sbjct: 503 QDTLEQMAHEATPHVLCTYLYELASLYMKFYEAC---PILK--DDVSESDKASRLALCAL 557

Query: 566 VASIINSGLNIIGVESPNEM 585
            ++ ++ GL+++G+ + ++M
Sbjct: 558 CSNTLSHGLDVLGIATLDKM 577


>gi|229133023|ref|ZP_04261864.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228650441|gb|EEL06435.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 562

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 134/613 (21%), Positives = 230/613 (37%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L +     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQNEFGDAAF-PCFSLVKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVN 124
           + +  ++K DP    V   G  ++N++ +   +   +  I +V   EYG+N  G    V 
Sbjct: 59  KELAEKLK-DPFFTKVEAVGP-YVNVFFNRETVSDKVLKIILVEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N+  + E     ++  +V      K + EL       W   ++   + +V+  
Sbjct: 174 ---KKWGNEEVVKEDPIRELFKLYVQFHEEAKENKELEEEG-RSWFKKLEEGNEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+      + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNDKMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEKEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYEFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYDWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 VALAEQNIEEKNPNLKQKEDVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             +    RL L +AV  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQAFNKYYGNVRIL--------EESEEKESRLALAYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GV +P EM
Sbjct: 550 GLRLLGVGAPEEM 562


>gi|257079701|ref|ZP_05574062.1| arginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257087497|ref|ZP_05581858.1| arginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257419922|ref|ZP_05596916.1| arginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294780860|ref|ZP_06746215.1| arginine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270768|ref|ZP_07552058.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|312899897|ref|ZP_07759215.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|256987731|gb|EEU75033.1| arginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256995527|gb|EEU82829.1| arginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257161750|gb|EEU91710.1| arginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294452105|gb|EFG20552.1| arginine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306512882|gb|EFM81524.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|311292893|gb|EFQ71449.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025346|gb|EFT37278.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315148497|gb|EFT92513.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315150094|gb|EFT94110.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315166333|gb|EFU10350.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|323481459|gb|ADX80898.1| arginyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 563

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 243/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +  + +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFEWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|206975181|ref|ZP_03236095.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206746602|gb|EDZ57995.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 562

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +++ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +    L +I+    EYG N  G    V 
Sbjct: 59  KEVAQKL-SDPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFLLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ +      +R +  N       RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAE--KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|196033964|ref|ZP_03101375.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|228945801|ref|ZP_04108147.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993644|gb|EDX57601.1| arginyl-tRNA synthetase [Bacillus cereus W]
 gi|228813866|gb|EEM60141.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 562

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/613 (22%), Positives = 236/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N+Y +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAQKL-SDPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|325125547|gb|ADY84877.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 565

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/608 (22%), Positives = 238/608 (39%), Gaps = 76/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L+ +     ++      + IERP+D   G  +      L++ +   P  IA  
Sbjct: 4   KQLVAEALQAVLPDWSLDD---IDVKIERPKDEKLGDYAFP-TFTLAKTMRKAPNLIAVE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V   G  +IN +L  S     IL  I+     YG   +G G  V  E
Sbjct: 60  LAEKIDQ-GSFEKVEAVGP-YINFFLDKSQTGAAILQEILADPENYGARDLGHGRNVLTE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRY 185
           + S N   PM +GH R  ++G+ +A ++A  G++  R  Y+ D G Q    +A    W  
Sbjct: 118 YSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMK 243
              +  +  +    YY  +  +       D+   E  +  E  ++    +  +  +  ++
Sbjct: 178 DADIEKDPINTLLSYYVRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L++  D F  E          +   I  L  +G +        KS+  +  D
Sbjct: 238 RFKKVYDMLDVHFDSFTGEAF----SAQMMDKPIQILREKGLL-------VKSQGAEIVD 286

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +++  L              ++KS+G+ TY   DLA    + +  GF   IYV+G +   
Sbjct: 287 LEKYNL----------PPLMVIKSNGTSTYITRDLATAMYRKKTYGFYKSIYVVGQEQEV 336

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           Y ++L A    +    A   V +   +         KMS R G+ + L  V++E      
Sbjct: 337 YFQQLRACLKEMGFDWADDIVHISFGLMSING---QKMSTRKGNVVNLEDVLNESVDLAR 393

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       +DF+  +V +   E    YVQYA
Sbjct: 394 KQISEKNVGLKNADEVAKQVGIGAVVFHDLKNYRRNPIDFNLEEVVKFEGE-TGPYVQYA 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR  S+ R++       DF       I  E      E  L+  +A Y   I+ A    +
Sbjct: 453 RARGESLLRKSGIT----DFSDADLTKIGAE------EWDLVSFMARYADTIQKAMETYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++
Sbjct: 503 PSAIAKYALELAKRFNKYYAHTRIL-----VDDVDEDVKKARLAVVQAVSHVIKSALDLL 557

Query: 578 GVESPNEM 585
            V++P+EM
Sbjct: 558 DVKAPDEM 565


>gi|257084503|ref|ZP_05578864.1| arginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256992533|gb|EEU79835.1| arginyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 563

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 242/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKKAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATKRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|221091655|ref|XP_002169247.1| PREDICTED: similar to arginyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 762

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 130/613 (21%), Positives = 240/613 (39%), Gaps = 67/613 (10%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL------GLDPLTIAE 66
           N L E        + I   + +   ++   G    N+AM +++         L P+ IAE
Sbjct: 177 NLLFETAICNAFPEFINPPVSLTVAQNSNFGDYQCNSAMAIAKLAEKKHGKKLSPVVIAE 236

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  +  +P V  V IAG GFIN+ L   ++  IL+ ++   +      +GK  KV I+
Sbjct: 237 KILENLPSNPVVKEVSIAGPGFINITLEKRFVCDILNKVLHEKVHPP--GVGKKKKVIID 294

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R +++G++LA L+ F  ++V R  ++ D G Q   L   +  ++ 
Sbjct: 295 FSSPNIAKEMHVGHLRSSIIGESLARLLEFLNHDVLRLNHVGDWGTQFGMLIAHLEDKFP 354

Query: 187 --QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             + +     DL   Y           E   +    +++   +   P VK+ + + +  +
Sbjct: 355 NFKEVSPPIEDLQSFYKASKKRFDEDGEFKKRAYQRVVDL--QGGNPDVKN-AWKLICDV 411

Query: 245 IRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            R + + +  + DI + E    ++      +  I+++L +  ++             +K 
Sbjct: 412 SRKEFQRIYDRLDITLIERGESYYN---DLMPKIVEDLKKGSFLL---------DICEKA 459

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHS 361
           D  R      +      +   L+KSDG +TY  +DLA   +   +   + +IYV+ +   
Sbjct: 460 DDGRWIAWAPNMK----IPLILVKSDGGFTYDTSDLAALHQRLKDEHGEWVIYVVDAGQG 515

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + K++  +A         I  +      +       K   R+GD + L  ++DE     
Sbjct: 516 DHFKQVFGLAQKAGWYNPSITRVDHVAFGVVLGEDKKKFKTRSGDTVRLSELLDEGLKRS 575

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                        +++  L         F F K+ +  K N   
Sbjct: 576 MDKLLEKERDKELSPDELKAAQSSTAYGCIKYADLCHNRLMDYVFSFDKMLD-DKGNTAV 634

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YAY R RSI R+AK     L+  +   ++    +     E +L   L  +P VI   
Sbjct: 635 YLLYAYTRIRSIQRKAKVDEQVLNLYISQNSI----NLSHEKEWKLGKLLCRFPEVITRC 690

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                 + L  YLY+LAS     +         R        + + R+ ++  VA    +
Sbjct: 691 ANDLMLHPLCEYLYELASTLTEFYDACYCIEINR-ETGEILSVDLNRIAILETVAKFFET 749

Query: 573 GLNIIGVESPNEM 585
           G  I+G++   +M
Sbjct: 750 GFYILGLKPVTKM 762


>gi|291300762|ref|YP_003512040.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569982|gb|ADD42947.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 570

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 118/601 (19%), Positives = 221/601 (36%), Gaps = 93/601 (15%)

Query: 35  ERP----RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
           E+P    R   H    TN  + L++  G  P  +A  +V ++     +  V +A  GF+N
Sbjct: 13  EQPDAMVRRSDHADFQTNGILPLAKQAGQQPRDLAVAVVDQLDHGDLLSEVTVASPGFVN 72

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + ++ + + + +   +   +  G      G+   +++ + N    MHVGH R  V+GD L
Sbjct: 73  ITVTDAAVWRQVEQRLADSL-LGLGQPEAGSTTVVDYSAPNVAKQMHVGHLRSTVIGDAL 131

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A L+   G  V R+ ++ D G Q   L      +Y     + D      + PG+      
Sbjct: 132 ARLLEALGATVIRQNHLGDWGTQFGMLI-----QYLDEHPDLDWHRRGDHSPGIDTLDAL 186

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA-----MMKIIRDDLKALNIQH--------- 256
              A        +F +     +V   S  A        ++R  ++A N  +         
Sbjct: 187 YRAARAVFDTDTDFADRSRKRVVALQSGDAATVAVWRDLVRTSMEAFNAIYRRLGVSLTD 246

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---S 313
           +    E  ++      + D++  L   G                  + D    +F    +
Sbjct: 247 EHLAGESSYNP----LLADVVSALVEAGIA---------------VESDGALCVFDDRFT 287

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA 372
              G  +   + K DG + Y A DLA  + +  + G D ++Y++ +  S + +++ A A 
Sbjct: 288 GHEGQPIPLIVRKRDGGFGYAATDLATIRHRAQDLGADRVLYLVDARQSLHFRQVFAAAR 347

Query: 373 AVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVDEVGSDS---------- 421
                   + V        L  DG P K   R+G  + L  ++D     +          
Sbjct: 348 RAGWLGDDVEVRHVPFGTVLGADGKPFK--TRSGGTVALTSLLDAAVDGARAVVADKNPE 405

Query: 422 -----------------VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                            V++  L         F+  K+      N   Y+QYA+ R  SI
Sbjct: 406 LPAAELDAIAEAAGIGAVKYADLSTARGTDYRFNVDKMVAL-NGNTGVYLQYAHTRIASI 464

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R++                +  +     +E  L +HL +Y RV+ +     EP+++A Y
Sbjct: 465 LRKSP---------TGTHAAVHVDLPPHPAERVLALHLDDYSRVLADTVEQLEPHRVATY 515

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L++LA +F   + +         + A +  +   RL L       ++ GL I+G+ +   
Sbjct: 516 LFELAKLFSAFYENC------PVLSAADSAVRGNRLALTELARRTLSHGLCILGITALER 569

Query: 585 M 585
           M
Sbjct: 570 M 570


>gi|255975129|ref|ZP_05425715.1| arginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256616973|ref|ZP_05473819.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256763163|ref|ZP_05503743.1| arginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256853827|ref|ZP_05559192.1| arginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307276760|ref|ZP_07557872.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307285744|ref|ZP_07565878.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307290479|ref|ZP_07570392.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|255968001|gb|EET98623.1| arginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596500|gb|EEU15676.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684414|gb|EEU24109.1| arginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256710770|gb|EEU25813.1| arginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|295113508|emb|CBL32145.1| arginyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306498426|gb|EFM67930.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306502505|gb|EFM71772.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506537|gb|EFM75695.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315030154|gb|EFT42086.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315161616|gb|EFU05633.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0645]
          Length = 563

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 244/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++ ++V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +  + +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFEWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|116513886|ref|YP_812792.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275344|sp|Q04B18|SYR_LACDB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116093201|gb|ABJ58354.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 565

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/608 (22%), Positives = 238/608 (39%), Gaps = 76/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L+ +     ++      + IERP+D   G  +      L++ +   P  IA  
Sbjct: 4   KQLVAEALQAVLPDWSLDD---IDVKIERPKDEKLGDYAFP-TFTLAKTMRKAPNLIAVE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V   G  +IN +L  S     IL  I+     YG   +G G  V  E
Sbjct: 60  LAEKIDQ-GSFEKVEAVGP-YINFFLDKSQTGAAILQEILADPENYGARDLGHGRNVLTE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRY 185
           + S N   PM +GH R  ++G+ +A ++A  G++  R  Y+ D G Q    +A    W  
Sbjct: 118 YSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMK 243
              +  +  +    YY  +  +       D+   E  +  E  ++    +  +  +  ++
Sbjct: 178 DADIEKDPINTLLSYYVRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L++  D F  E          +   I  L  +G +        KS+  +  D
Sbjct: 238 RFKKVYDMLDVHFDSFTGEAF----SAQMMDKPIQILREKGLL-------VKSQGAEIVD 286

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +++  L              ++KS+G+ TY   DLA    + +  GF   IYV+G +   
Sbjct: 287 LEKYNL----------PPLMVIKSNGTSTYITRDLATAMYRKKTYGFYKSIYVVGQEQEV 336

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           Y ++L A    +    A   V +   +         KMS R G+ + L  V++E      
Sbjct: 337 YFQQLRACLKEMGFDWADDIVHISFGLMSING---QKMSTRKGNVVNLEDVLNESVDLAR 393

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       +DF+  +V +   E    YVQYA
Sbjct: 394 KQISEKNAGLKNADEVAKQVGIGAVVFHDLKNYRRNPIDFNLEEVVKFEGE-TGPYVQYA 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR  S+ R++       DF       I  E      E  L+  +A Y   I+ A    +
Sbjct: 453 RARGESLLRKSGIT----DFSDADLTKIGAE------EWDLVSFMARYADTIQKAMETYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++
Sbjct: 503 PSAIAKYALELAKRFNKYYAHTRIL-----VDDVDEDVKKARLAVVQAVSHVIKSALDLL 557

Query: 578 GVESPNEM 585
            V++P+EM
Sbjct: 558 DVKAPDEM 565


>gi|300788535|ref|YP_003768826.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299798049|gb|ADJ48424.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 574

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 133/615 (21%), Positives = 237/615 (38%), Gaps = 73/615 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIE-RPRDCAHGHLSTNAAMILSRPLGL 59
           M   AD +  L   +     +      + ++ +++  PRD        N AM L + LG 
Sbjct: 1   MQQTADVTEELARRVVTAAGRALDVALMPEQALVQASPRDGV--DYQANLAMSLGKQLGR 58

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A LI   +++D   D   ++G GF+N  L   +L     +++      G     +
Sbjct: 59  PPREVAGLIAGALELDGIADPPEVSGPGFLNFSLRTEWLEARTGALLGD-PRLGVPETTE 117

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +++ S N    MHVGH R +V+GD LA L+ F+G+EV    ++ D G     L  
Sbjct: 118 PRRIALDYSSPNVAKEMHVGHLRSSVIGDALARLLRFAGHEVLPHNHLGDWGTPFGMLIE 177

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYS 237
            +      A     +DL   Y          +  A +  + ++     +E  L + ++  
Sbjct: 178 HLL--DVPAGQRAIADLDAFYREARRKFDSDEAFATRARTRVVKLQSGDEDTLAVWQEL- 234

Query: 238 VQAMMKIIRDDLKALNIQH-DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           V    +   +    L I   D  I  + ++      +  +ID+L   G           S
Sbjct: 235 VDESTRHFNEVYALLGISLTDKDIYGESYYNP---YLATVIDDLEAAGLT-------EVS 284

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYV 355
                   +       S   GD +   + K DG Y Y A DLA  +    ERG  +++YV
Sbjct: 285 NGAICVFPEG-----FSNREGDRLPLIVRKRDGGYGYAATDLATVRYWTAERGATDLLYV 339

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  + +   + A   A          +    V L  DG    M  RAG+ + L  ++ 
Sbjct: 340 VGTPQAQHFAMVFATCRAAGWLTGHAEHVGFGTV-LGADGKA--MRTRAGETVKLADLLT 396

Query: 416 E--------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           E                          VG  +V++  L         F + ++    + N
Sbjct: 397 EAVTQAAAVVTERSELDAAGQAEVARAVGIGAVKYADLSGDRERDYVFAWDRMLAY-EGN 455

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+AR +S+ R+A  +       L              +E  L + L  +   +
Sbjct: 456 TSVYLQYAHARTQSLLRKAGGLPEGTQVALEA-----------PAERALALKLLRFGEAL 504

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + AT    P+KL  YLY+ A  F   +           ++A++  L   RL+L    +  
Sbjct: 505 KAATSGYAPHKLCTYLYETAVAFSRFFEEC------PVLKASSPSLRASRLRLTTLTSHT 558

Query: 570 INSGLNIIGVESPNE 584
           +  GL+++G+E+P+ 
Sbjct: 559 LALGLSLLGIEAPDR 573


>gi|184155809|ref|YP_001844149.1| arginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|229470718|sp|B2GDD7|SYR_LACF3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|183227153|dbj|BAG27669.1| arginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 562

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/609 (22%), Positives = 253/609 (41%), Gaps = 81/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             ++ + L+++   + VE        +ERP+D  +G  +      L++ L   P  IA  
Sbjct: 4   RQQVASALQKVLPNLSVEDLEAK---LERPKDAKNGDYAFPTFF-LAKELHRAPQVIASE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V +AG  +IN +L  + +  +IL++++     YG   +G    V I+
Sbjct: 60  LAEQIDQSG-FERVVVAGP-YINFFLDKASVGGEILAAVLADPANYGSTDLGHQGHVTID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   PM +GH R  V+G+ +A+++A   Y   R  ++ D G Q   L  +   W  
Sbjct: 118 LSSPNIAKPMGMGHLRSTVIGNAIANILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGD 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           +  +  +  +  + YY  +  +       D    E    L   + +   + K +   ++ 
Sbjct: 178 EAEVQKDPINTLQKYYVKINTEADEHPEYDDLGREWFAKLEQGDPEAQRLWKWFREVSLQ 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + ++     L+I  D F  E  ++      + +++  L  +  + E       S+  +  
Sbjct: 238 RFMKI-YNLLDIDFDSFNGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEII 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHS 361
           D+++  L              + KSDGS  Y   DLA     K        +YV+G++ S
Sbjct: 286 DLEKYDL----------NPAMIRKSDGSTLYLTRDLAAALFRKRMYHHAQSLYVVGAEQS 335

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
            +  +L+AV + +    +     +   +         KMS R G+ I L  V+       
Sbjct: 336 NHFAQLKAVLSEMGFTWSDQIHHIPFGLMSLNGK---KMSTRKGNIIQLEDVLNDSIKLA 392

Query: 415 ------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                             +EVG  +V F  L  + +  +DF   +V +   E    YVQY
Sbjct: 393 RQQIEEKNPTLANADQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGE-TGPYVQY 451

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI R+A        F+     V  QE+       ++   + +Y   I  A    
Sbjct: 452 AHARAESILRKAGRP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEY 501

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +  Y   LA  F+ +++H R       ++ +++KL   RL LV AV+ ++ S L +
Sbjct: 502 DPSLIGKYALSLAKSFNQYYAHTR------ILEEDDQKL--SRLALVQAVSDVLKSALAL 553

Query: 577 IGVESPNEM 585
           +GV++P+EM
Sbjct: 554 LGVKAPDEM 562


>gi|170759904|ref|YP_001786465.1| arginyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688532|sp|B1KYT1|SYR_CLOBM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169406893|gb|ACA55304.1| arginine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 563

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 119/615 (19%), Positives = 238/615 (38%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKDMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V++   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTVLIKDVLEKVLNEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLISAYRRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPE--EKWLPIVKDY 236
             ++AL  +      G    +Y+K         EL  +         +  E+   +   +
Sbjct: 175 VDEEALEKD----AIGELLRIYVKFHEEAEKNPELEKEARLNFKKLEDGSEEETELWNRF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L I+ D    E  +       +  ++  +  +G + +       S
Sbjct: 231 K-DLSLKEFNKVYDMLGIKFDSLAGESFY----SDKMDAVVQEIDDKGLLVD-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              + KSDG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAKVVMLDDYNM----------PPCMIKKSDGATIYATRDLAAAMYRKKTYDFHKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  + + K++      +    A     +   +    +    K+S R GD + L  +++
Sbjct: 329 VGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         +G  +V F  L       + FD+ ++     E  
Sbjct: 386 QSVEETLKIINEKNPNLKDKEGTAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YV+Y+YAR +SI R+A ++  + D+                 E +L   L  +   I 
Sbjct: 445 GPYVEYSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIM 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           NA    EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I
Sbjct: 495 NAIDKLEPAMVTRYVIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            + LN++G++   EM
Sbjct: 549 KNALNLLGIDVVEEM 563


>gi|313887918|ref|ZP_07821597.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846084|gb|EFR33466.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 569

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/617 (22%), Positives = 247/617 (40%), Gaps = 87/617 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +   L E      ++ K +D+ +IE P +   G  +      L++    +P  IA
Sbjct: 3   NFREEIIKILDEKIE--GLDAKEIDK-MIEVPPNYELGDFAFPV-FSLAKIYRKNPAMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +I      + V      ++N Y++ S L  +IL   V     +G+   G+   V 
Sbjct: 59  EELAGQID-SKYFEKVENKNA-YLNFYINKSILVEEILREAVDRKENFGKTNYGENKNVI 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH R  V+GD+L  +  F G+      ++ D G Q   L  +    
Sbjct: 117 VEYSSTNIAKPFHIGHIRSTVIGDSLKRIYDFLGFNTIAINHLGDYGTQFGMLIYAYKTW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAM 241
             +A   ND   P      +Y+K  G    D+   +   +    W   +++    +V+  
Sbjct: 177 GSKAAIEND---PINELLKLYVKVNGVCEEDESVKDECRY----WFKELENGNPEAVEIW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                  LK  N  +D+     D + G+      +  +I+ L  +  + E       S+ 
Sbjct: 230 QWFKEVSLKEFNRVYDMLDIHFDSYNGESFYSDKMPGLIEELREKKVLEE-------SQG 282

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            +  ++D            D     ++KSDG+  Y   DLA  K ++E       IYV+G
Sbjct: 283 AEVINLDE----------FDLPPAIVVKSDGTTIYLTRDLAAAKYRHETYKPYKNIYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
           S  S +  +L++             V +   +    DG    +S R G  + L  V++  
Sbjct: 333 SQQSLHFNQLKSALKKAGYDWYDEIVHVPFGMVSLEDGT---LSTRRGKVVYLEDVLNKA 389

Query: 416 ---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                       VG  +++F  L+    +   F++ K      E
Sbjct: 390 TDKVREILDAREEEQGQKIENKEELAQAVGIGAIKFQELFNGRIKDYTFNWDKTLSFEGE 449

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               YVQY +AR  S+ ++        DFD+   N I      + SE+ +I  L  +  V
Sbjct: 450 -TGPYVQYVHARICSLLKKG-------DFDI--NNEIDPSLLTEESEINIIRSLYNFTDV 499

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + +A    EPY +  Y  +LA  F+  ++  +       +  ++ KL   RL L +AV +
Sbjct: 500 VVDACEKYEPYFITRYTVELAKNFNKFYNQTQ-------ILVDDEKLKNTRLMLCYAVKN 552

Query: 569 IINSGLNIIGVESPNEM 585
           +I SGLN++G+++P +M
Sbjct: 553 VIASGLNLLGIKAPEKM 569


>gi|297563083|ref|YP_003682057.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847531|gb|ADH69551.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 581

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/619 (20%), Positives = 236/619 (38%), Gaps = 85/619 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S R+++ L           +  D   + RP          NAA+ L++ LG  P  ++ 
Sbjct: 8   LSRRVQSALGAAF-----GPEFADTDPVIRP--SQFADYQANAALALAKRLGRKPREVSA 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+  + +      V ++G GFINL L   ++    +  ++     G     +   + ++
Sbjct: 61  AIMEHLDVADVCRDVEVSGPGFINLTLREDWIAGQ-TRRLLDDPRLGVPE-QERQNIPLD 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    MHVGH R  VVGD LA  + F G+ V R+ +I D G     L   +    +
Sbjct: 119 YSAPNVAKEMHVGHLRTTVVGDALARTLEFLGHNVIRQNHIGDWGTPFGMLIEHLLEVGE 178

Query: 187 QALYNNDSDL-PEGYYPGVYLKHVG-----KELADKYSSELLNF--PEEKWLPIVKDYSV 238
            +   +     P  +Y     K         + A +    +++    +E+ L + +   V
Sbjct: 179 DSPEADLVTTDPNAFYQAARTKFDSSGPGPDDFAARARRRVVSLQSGDEETLRLWRKL-V 237

Query: 239 QAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                        L +    +    E  ++    + + D+ + L  +G            
Sbjct: 238 GLSKVYFNKVYAKLGVTLTDEDLAGESSYN----AALADVCEELEAKGIA---------- 283

Query: 297 KTTQKCDMDRKQLLFRSTMVG-DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNM 352
                   D    +F     G +D   PL+  KSDG Y Y   DLA  + +  +   D +
Sbjct: 284 -----EISDGALCVFLEGFTGREDKPVPLIVRKSDGGYGYATTDLATVRHRVDDLKADRI 338

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL---------YRDGMPIKMS-- 401
           +YV+G+  + + K + A A         +  +  ++  +          R G P+++   
Sbjct: 339 LYVVGAPQAMHFKMVWATAREAGWLPEGVETVHVQIGNVLGSDGKILRTRSGAPVRLMAL 398

Query: 402 -----KRAGDFIT----------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                +RA   +              +  +VG  +V++  L   +     FDF ++   +
Sbjct: 399 LDEAIERAAAVVAQNRPDLDAEGQAEIARQVGIGAVKYADLSVAHDTEYTFDFDRMLALT 458

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QYA AR RSIFR+          D+         S  + +E  L + L E+ 
Sbjct: 459 -GNTGPYLQYAQARIRSIFRKGGLELSQARGDI---------SVSEGAERDLALKLLEFG 508

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+       +P++L+ YL++LA      + H         + A N      RL LV   
Sbjct: 509 AVVAQVGDLLQPHRLSTYLFELAQSLTAFYEHC------PVLTAPNEAERESRLALVAVA 562

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++  GL+++GVE+P  M
Sbjct: 563 FRVLVQGLDLLGVEAPEHM 581


>gi|315170234|gb|EFU14251.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 563

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 243/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++   + P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRIAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFDWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|256847531|ref|ZP_05552977.1| arginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256716195|gb|EEU31170.1| arginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 563

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/609 (22%), Positives = 252/609 (41%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             ++   L+     + + + I D+  IERP+D  +G  +      L++ L   P  IA+ 
Sbjct: 4   REQVIKALQPALTDLSMNE-IADK--IERPKDSNNGDYAFPTFF-LAKTLHKAPQIIAQE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIE 126
           ++A+I      + V +AG  +IN +L    + +  L +I+     YG   +G    V I+
Sbjct: 60  LLAKIDQTG-FEKVVVAGP-YINFFLDKQVVGENILKTILADPENYGSQDLGHLANVAID 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   PM +GH R  V+G+ +A+++A  GY   R  ++ D G Q   L  +   W  
Sbjct: 118 LSSPNIAKPMGMGHLRSTVIGNAIANILAKVGYNPIRINHLGDWGTQFGKLMAAYEMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++ +  +  +  + YY  +  +       +    E    L   + +   + K +  +++ 
Sbjct: 178 EEEVQQDPINTLQKYYVKINTEADTHPEYNDLGREWFKNLENGDPEAYRLWKWFRAESLK 237

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + ++   + L+I  D +  E  ++      + +I   L  +  + E       SK  Q  
Sbjct: 238 RFMKI-YRLLDIDFDSYNGEAFYN----DKMAEIDQLLQDKHLLQE-------SKGAQIV 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHS 361
           D+++  L              + KSDGS  Y   DL A    K   GF   +YV+G++  
Sbjct: 286 DLEKYNL----------NPALIKKSDGSSLYITRDLSAALFRKRMYGFAQALYVVGAEQR 335

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            +  +L+AV + +    ++    +   +         KMS R G+ + L  V+++     
Sbjct: 336 NHFDQLKAVFSEMGFTWSKQIHYIPFGLMSLNGK---KMSTRKGNIVQLEDVLNDSIKLA 392

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               VG  +V F  L  + +  +DF    V +   E    YVQY
Sbjct: 393 RQQIAEKNPELQNADEVARQVGVGAVIFHDLKNERTNSIDFKLADVVKFEGE-TGPYVQY 451

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI R+A          L                  ++  L +Y  VIE A    
Sbjct: 452 AHARAESILRKAGTPDFAQAESLA---------LSGDEAWGILTRLGQYGEVIERAANEY 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +  Y   LA  F+ +++H R       +  ++ +  M RL LV AV+ ++ S L +
Sbjct: 503 DPSLVGKYALALAKDFNQYYAHTR-------ILVDDDE-KMARLALVKAVSEVLKSSLAL 554

Query: 577 IGVESPNEM 585
           +GV++P+EM
Sbjct: 555 LGVKAPDEM 563


>gi|229109648|ref|ZP_04239234.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228673689|gb|EEL28947.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
          Length = 562

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 235/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  ++ F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAIIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|300122665|emb|CBK23232.2| unnamed protein product [Blastocystis hominis]
          Length = 601

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/585 (21%), Positives = 230/585 (39%), Gaps = 86/585 (14%)

Query: 44  HLSTNAAMILSRPLG---------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
               N+AM L++ L           +P    ++I+  +     V+   +AG GFINLYL 
Sbjct: 49  DYQCNSAMGLTKKLQALRGKENAPKNPRECGQIIIDHLPESEFVEKTELAGPGFINLYLK 108

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S++ + + SI+  G         +  +V I++ S N    MHVGH R  ++GD+LA ++
Sbjct: 109 KSWVAQHILSILNHG---FVPPPTERKRVIIDYSSPNIAKDMHVGHLRSTIIGDSLARIL 165

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F G+EV R  ++ D G Q   L   +         N     DL   Y          K 
Sbjct: 166 EFCGHEVIRINHVGDWGTQFGMLIAHLQDIAPDFETNPPSIEDLTVFYKAAKCKFDEDKA 225

Query: 213 LADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             ++   E++N      K L + K     +  K+     K LN+   + +  + F+    
Sbjct: 226 FQERAHQEVVNLQSGVPKNLAMWKTLCSVSE-KMFSKVYKMLNVDPRLKMMGESFYNP-- 282

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +  ++  L  +G +                D D  ++LF     G +V   + KSDG 
Sbjct: 283 -LLPAMVKELDAKGLLQ---------------DSDGAKVLFPQ---GFEVPLIIQKSDGG 323

Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE------------- 376
           + Y + D+   K +  E   D +IYV+ S  + + +++   A                  
Sbjct: 324 FGYDSTDMTAIKYRIQEMKADWIIYVVDSGQALHFQQVFQAARDAGWVGSVRLDHVGFGV 383

Query: 377 ----KKAQIN------VLLCELVRLYRDGMPIKMSKRAGDFIT-------LRHVVDEVGS 419
                K +        V L +L+    +     M KR  D ++       +     ++G 
Sbjct: 384 VQGEDKKKFKTRAGKSVRLVDLLNEAAEKATAIMKKRVEDGVSGVSDPKEIEEAAAQLGY 443

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
             V++  L +       F F ++    + +   Y+QY++ARC SI R+A +   +L    
Sbjct: 444 GGVKYFDLRQNRLSDYVFSFERMLS-PEGDTNVYLQYSHARCMSIIRKAPEEVEEL---- 498

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                  Q +    SE  L  ++  +  V+E   +   P ++  Y+YDL+   +G +   
Sbjct: 499 ---KKHTQITLEHPSEWDLACYILRFSDVLEQVPMDLMPNRICKYIYDLSIKLNGFYRDC 555

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           R       V  +       RL LV A   ++  G +++G+ + ++
Sbjct: 556 R-------VIGSPE--QNSRLLLVAAAEKVMRQGFDLLGIVTLDK 591


>gi|152975407|ref|YP_001374924.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024159|gb|ABS21929.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 562

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/615 (20%), Positives = 232/615 (37%), Gaps = 89/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++  +    L          ++I+   +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKKQFAKALVNSLHAGLSLEEIMA--LIETPKQDEFGDAAFP-CFTLAKQYKKAPAQIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           + I + +K       V   G  ++N++ + S +    L +I+    +YG++  G+   V 
Sbjct: 59  KDIASELKGS-FFKKVEAVGP-YVNIFYNRSVVSNHILKTILAEKEKYGQHHFGQEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G+ L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNALKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK--WLPIVKD---YSVQ 239
             + L   D   P      +Y++        +   E     EE   W   ++D    +V 
Sbjct: 177 GNKDLVKED---PIRELFQLYVQFH------EEVKENPELEEEGRIWFKKLEDNDEEAVF 227

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKS 296
                  + LK  +  +++   E +  +G+      + + ++ L  +G + E       S
Sbjct: 228 LWNWFRHESLKEFSRIYELLGVEFENFQGEAFYNDKMDEFVEMLEEKGILEE-------S 280

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              Q  ++D + +              + KSDG+  Y   DL     +    GFD  +YV
Sbjct: 281 DGAQVVNLDEENM----------PPCLIRKSDGATLYATRDLTAALYRQNTYGFDKALYV 330

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD--------- 406
           +G++ S +  +   V   +     +  +       + +DG   KMS R G          
Sbjct: 331 VGAEQSLHFAQFFTVLKQLGYTWVE-GMQHVPFGLILKDGK--KMSTRKGKVVLLEEVLE 387

Query: 407 ----------------FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                 V  +VG  ++ F  L  +    ++F   K+ +   E  
Sbjct: 388 EAIALAQQHIEEKNPSLKQKAEVAKQVGVGAIIFHDLKNERMHNIEFSLEKMLKFEGE-T 446

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY +AR  SI R+    F    F L            D      +  L ++P+VIE
Sbjct: 447 GPYVQYTHARACSILRKEHVEFETATFALN-----------DDYSWNTLKLLNQFPQVIE 495

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP  +  Y+ D+A  F+ ++ + R           +      RL LV+AV  ++
Sbjct: 496 TAFTKNEPSHITKYILDVAQAFNKYYGNVRIL--------EDDHEKESRLALVYAVTIVL 547

Query: 571 NSGLNIIGVESPNEM 585
             GL ++G+ +P EM
Sbjct: 548 KEGLRLLGIGAPEEM 562


>gi|227534771|ref|ZP_03964820.1| arginine--tRNA ligase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187527|gb|EEI67594.1| arginine--tRNA ligase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 560

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/610 (21%), Positives = 238/610 (39%), Gaps = 81/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L+           I  + +IE P+    G  +      L++ +   P  IA
Sbjct: 2   DFKELVVKALEPALAGQLDAAAI--KSLIETPKSSDLGDYAFP-TFSLAKIMHRAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +V +I + P  + V   G G++N YL        +  ++    E+  +       V I
Sbjct: 59  SDLVGQIDVTP-FEKVKAVG-GYVNFYLDKISFAHDVLKVIAQAGEHYGDANIGSGNVPI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+ LA++++  GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPMSMGHLRSTVIGNALANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFP--EEKWLPIVKDYSVQAM 241
            + A+  +       YY   + K     EL D+  +        +E+ + + + +   ++
Sbjct: 177 SEDAVKADPIKNLLHYYVEFHEKAEANPELGDEARAWFKRLEDGDEEAIALWRWFRTVSL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  ++      + D++  L  +  +         S+  + 
Sbjct: 237 AEFNRI-YKILGVDFDSYNGEAFYN----DKMADVVKRLEDKHLL-------KTSQGAEI 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    + E   F   +YV+G++ 
Sbjct: 285 VDLSAYNL----------NPALIKKSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQ 334

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
             + ++L+AV   +    A     +   +         K+S R G+ I L +V+      
Sbjct: 335 REHFQQLKAVLLEMGYDWANDIHHIPFGLITANGK---KLSTRKGNIILLENVLRDAVGL 391

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                               EVG  +V F  L  +  +  DF+  +V     E    YVQ
Sbjct: 392 AKQQIAEKHPDLPNADKVAHEVGVGAVIFHDLKNERLDNFDFNLEEVVRFEGE-TGPYVQ 450

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR  SI R+A              +  P+ +  D +   ++  L +YP ++  A   
Sbjct: 451 YTNARANSILRKAAI------------DPAPEVALSDPAAWDVLRALGDYPSMVLRAAKE 498

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y   LA  F+ ++++ +       V   + +L   RL +V A   ++ + L 
Sbjct: 499 YEPSVIAKYALRLAKAFNKYYANVK-------VLVEDSEL-PARLAMVKATTQVLTNALQ 550

Query: 576 IIGVESPNEM 585
           ++GV +P EM
Sbjct: 551 LLGVGAPEEM 560


>gi|153954173|ref|YP_001394938.1| arginyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854782|ref|YP_002471904.1| hypothetical protein CKR_1439 [Clostridium kluyveri NBRC 12016]
 gi|189083529|sp|A5N8F9|SYR_CLOK5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782955|sp|B9E1W5|SYR_CLOK1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146347054|gb|EDK33590.1| ArgS [Clostridium kluyveri DSM 555]
 gi|219568506|dbj|BAH06490.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 566

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/613 (21%), Positives = 247/613 (40%), Gaps = 81/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF    K   +EI   I +E   ++  +IE P     G  +      L++ L   P  I+
Sbjct: 2   DFK---KLAAEEIKKNIDLELNFIEG-LIEVPPKPEMGDYAFP-CFQLAKVLKKAPNIIS 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++      + +   G  ++N ++    +    L  I++ G  YG + +G+G  V 
Sbjct: 57  KELKDKL-HSKYFEKIENLGP-YVNFFVDKKIFTEYTLKEILLKGDSYGSSDMGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P HVGH     +G+ L  ++ F GY  TR  ++ D G Q   L  + + R
Sbjct: 115 VEYSSPNIAKPFHVGHLFSTSIGNALYKMINFQGYNCTRINHLGDWGTQFGKLI-AAYNR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MM 242
           +  A   N   + E     +Y+K       +      LN     +   ++D S +   + 
Sbjct: 174 WCNAEELNRDPIKE--LLRIYVKFH----EEAEKDPSLNEEGRMYFKKLEDGSEEEIKLW 227

Query: 243 KIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
           K  +D  L+     +D+   + D + G+      +  +++ + ++G + E       S  
Sbjct: 228 KKFKDLSLREFKKVYDLLKVDFDSYAGESFYTDKMDAVVEEIDKKGLLVE-------SNG 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            +   +D   +              + KSDG+  Y   DLA    + +   F   IYV+G
Sbjct: 281 AKVVLLDEYNI----------PPCIVKKSDGTTIYATRDLAAAIYRKKTYDFYKSIYVVG 330

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
            D S + K++      + +  A     +   +  + +    K+S R GD I L  +++  
Sbjct: 331 LDQSLHFKQVFTTLKLMGKDWADSCKHVGFGLVRFANK---KLSTRKGDVIFLEELLNKS 387

Query: 416 -----------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                  ++G  +V F  L     + + FD+ ++     E    
Sbjct: 388 VERTLEIINEKNPKLENKEEAAKKIGIGAVIFTYLKNNREKDIVFDWNEMLSFEGE-TGP 446

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY+YAR +SI R++++   D        N I         E +L+  L  + + I NA
Sbjct: 447 YVQYSYARGKSILRKSEEASYD-------ENQIDYSKLGSKEEFELVKILENFNKSIINA 499

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP+ +  Y+ D+A  F+  ++          + A +  +   RL LV     ++ +
Sbjct: 500 INRLEPFIVTRYVIDVAKAFNKFYNAH------SIMNAADENIKKARLYLVKCTCQVLKN 553

Query: 573 GLNIIGVESPNEM 585
           GLN++G+E   +M
Sbjct: 554 GLNLMGIEVVEKM 566


>gi|77359609|ref|YP_339184.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|109895020|sp|Q3IHI4|SYR_PSEHT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76874520|emb|CAI85741.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 580

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 121/617 (19%), Positives = 237/617 (38%), Gaps = 69/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L          + +       +   +      G    NAAM  ++ +  +
Sbjct: 1   MNI----RTILVEKAIAAMTTVGLPADTNPAVT--QSTRPQFGDYQINAAMGAAKKMKSN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+  + +    +   IAG GFIN++L P +L + + +   S  +   N     
Sbjct: 55  PRELAQKIIDNLDVSDIAEKTEIAGPGFINIHLKPEFLAQSVKA-ANSDAKLAVNEHANP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +++ S N    MHVGH R  ++GD +   + F G  V R+ ++ D G Q   L   
Sbjct: 114 QKVVVDYSSPNLAKEMHVGHLRSTIIGDAIVRALEFRGDSVVRQNHMGDWGTQFGMLIAH 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  Q +  +   L +               A K   +   F ++    +VK     A
Sbjct: 174 LEDQISQGVDLDTVALAD--------LETFYRDAKKRFDDEEGFADKARNYVVKLQGGDA 225

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +     A +++H    SE+ + R + +  +  I   +        I+   K K   
Sbjct: 226 HCEKLWKLFIATSVKH----SEEVYKRLNVTLTQADIMAESAYNAELNDIISLLKDKNIA 281

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
             +    Q++F    +   G+     + KS G + Y   DLA    +  + G D ++  +
Sbjct: 282 -VESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGADRILIFV 340

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK-MSKRAGDFITLRHVVD 415
            +  S +  ++E  A      + + +   C    +   G   K    R G  + L  +++
Sbjct: 341 DARQSLHFNQVELTARKAGFLRDETSYEFCPFGTMM--GADNKPFKTRTGGTVKLADLLE 398

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    F++  +    + 
Sbjct: 399 ESINRAAIKLAERESDLSEQERSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSF-EG 457

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               Y+QYAY R RSIFR++      L+ ++       +       +L+ ++ L     +
Sbjct: 458 ATAPYLQYAYTRIRSIFRKSGVDAATLNSNVTIVEPQEKALALKLLQLEEVLDL-----M 512

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A     P+ L  YLY+LAS++   +      P L+  +     +   RL L + V+ 
Sbjct: 513 ITEA----TPHVLCGYLYELASLYMTFYEAC---PVLK--EGVEPNVRDSRLVLCNLVSK 563

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+++G+E   +M
Sbjct: 564 TLETGLDLLGIEVMEQM 580


>gi|229549355|ref|ZP_04438080.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972063|ref|ZP_05422649.1| arginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256956746|ref|ZP_05560917.1| arginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860154|ref|ZP_07106241.1| arginine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|312953554|ref|ZP_07772391.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305592|gb|EEN71588.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963081|gb|EET95557.1| arginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256947242|gb|EEU63874.1| arginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849193|gb|EFK76943.1| arginine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|310628392|gb|EFQ11675.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315035945|gb|EFT47877.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315151966|gb|EFT95982.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159299|gb|EFU03316.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 563

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 124/610 (20%), Positives = 243/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFP-AFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +     + + + + G  ++N +++   + + ++ ++V     YG +  G    V I+  
Sbjct: 63  EKFDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +        +        W   ++  D     + K  
Sbjct: 181 AVRQQ----PINELLRLYVQFHEEAEEKPELED----EARAWFKKLEEGDQEANELWKWF 232

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK  +  + +   E D + G+      + +I+  L  +  + E        +  + 
Sbjct: 233 RSESLKEFDKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTEN-------QGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLTEYNL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +  + +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SNHFKQLKAVLKELGFEWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AGNQINEKNPDLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A           F  +   + +  D    +++  L ++P  +  A   
Sbjct: 452 YTHARAMSILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H R          +       RL LV+AVA+++   L 
Sbjct: 502 YEPSVIAKHSIHLAQAFNKYYAHVRIL--------DEDAQKEARLALVYAVATVLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P EM
Sbjct: 554 LLGLHAPEEM 563


>gi|27262256|gb|AAN87409.1| Arginyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 392

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/406 (33%), Positives = 216/406 (53%), Gaps = 23/406 (5%)

Query: 1   MYLFADFSSRLK----NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56
           M    +    +       L+      ++  + L  + +E PR+  HG  +TN AM +++ 
Sbjct: 1   MNFVENIRRHITGAIGAALEAARNTGEINFEHLPTVALEVPREKQHGDFATNVAMTMAKQ 60

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             ++P  +AE IVA I     +  V IAG GFIN  L   +L  +L ++  +   YG + 
Sbjct: 61  ARMNPRQLAEKIVAHIDRGDWLKDVQIAGPGFINFTLHHHWLYPVLPAVQQTDDRYGASQ 120

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
            G G +V +EFVSANPTG +H+G+ R A +GDTLA+L+  +G++VT+E+YINDAG QI  
Sbjct: 121 AGAGKRVQVEFVSANPTGLLHMGNARGAALGDTLANLLRLAGFDVTKEFYINDAGNQIEN 180

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            A S+  RY Q L   D   PE  Y G  +    + L  K   + +         ++  Y
Sbjct: 181 FAKSLEARYLQLL-GQDVPFPEEGYHGEDVAETMRGLIAKDGDKYVPMETTLRRELLVKY 239

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++Q  +  IR+ L    + +DI+ SE   H  D   IR+ ++ L   GY+YE        
Sbjct: 240 ALQEKLSGIRESLARFGVDYDIWFSEQSLH--DSGAIRETLETLRANGYIYEN------- 290

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                       L F++T +G++ D  L++S+G  TYFAAD+AY K K++RGFD +I + 
Sbjct: 291 ---------EGALWFKATSLGEEKDEVLVRSNGIPTYFAADIAYHKNKFDRGFDWVINIW 341

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           G+DH G+V R++    AV      ++V+L +LVRL++ G  ++MS 
Sbjct: 342 GADHHGHVSRIKNAVKAVGYNSENLDVILMQLVRLFKGGEIVRMSS 387


>gi|29831291|ref|NP_825925.1| arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|39932148|sp|Q82E68|SYR_STRAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29608406|dbj|BAC72460.1| putative arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 590

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/624 (21%), Positives = 232/624 (37%), Gaps = 83/624 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L A    RL + L     +      +L        R         N  + L++    +P 
Sbjct: 7   LTASVHQRLADALSAALPEAGSADPLL--------RRSDRADFQANGILALAKKAKANPR 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  +VAR++    +  + ++G GF+N+ ++   + + L++    G   G  L      
Sbjct: 59  DLATQVVARVESGEVIKDIEVSGPGFLNITITDQAITRNLAARYEDGERLGVPLAEHPGT 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I++   N    MHVGH R AV+GD +  ++ F+G  V R ++I D G Q   L     
Sbjct: 119 TVIDYAQPNVAKEMHVGHLRSAVIGDAVVQILEFTGENVVRRHHIGDWGTQFGMLI---- 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L  +  +L       V  +     L   Y +    F  ++         V  + 
Sbjct: 175 ----QYLIEHPHELDHKGAAEVSGEEAMSNLNRLYKAARTLFDSDEEFKTRARRRVVDLQ 230

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPP---P 294
               + L         F+ E   +      + D +D   R   V     Y  +L      
Sbjct: 231 AGEPETLAMWQ----KFVDESKIYFY---SVFDKLDLEIRDPDVVGESGYNDMLDETCRL 283

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFD 350
             ++      D    +F   + G D   V   + KSDG Y Y A DL+  + + +    +
Sbjct: 284 LEESGVAVRSDGALCVFFDDVKGPDGNPVPLIVKKSDGGYGYAATDLSAIRDRVFNLKAN 343

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFIT 409
           ++IYV+ +  S + K +   A         +    L     L +DG P K   R G+ I 
Sbjct: 344 SLIYVVDARQSLHFKMVFETARRAGWLNDDVQAQQLAFGTVLGKDGKPFK--TREGETIR 401

Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                             VG  +V++  L         FD  
Sbjct: 402 LVDLLDEAIDRATAVVREKAEKVGLSEQEIEENGRYVGIGAVKYADLSTSAVRDYKFDLD 461

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++   + +  V Y+QYAYAR RSIF +A D  P          +   E E   +E  L +
Sbjct: 462 QMVSLNGDTSV-YLQYAYARIRSIFGKAGDRTP----------LAHPELELAPAERALGL 510

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL  +   ++       P+KLA YLY LAS++   +             A  +++   RL
Sbjct: 511 HLDRFGETLDEVAAEYAPHKLAAYLYQLASLYTTFYDQCPV-----IKPAPAQEVAENRL 565

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L    A  ++ G+ ++G+ +P  
Sbjct: 566 FLCDLTARTLHQGMALLGIRTPER 589


>gi|229079375|ref|ZP_04211917.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228703908|gb|EEL56352.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 562

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 236/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  +P    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDGRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|190404719|gb|EDV07986.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|323305436|gb|EGA59180.1| YDR341C-like protein [Saccharomyces cerevisiae FostersB]
 gi|323309660|gb|EGA62868.1| YDR341C-like protein [Saccharomyces cerevisiae FostersO]
          Length = 607

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/624 (22%), Positives = 243/624 (38%), Gaps = 90/624 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI      L    +E       G L      +  R  G +P  +A
Sbjct: 30  NIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRL--RIKGANPKDLA 87

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
                +      ++ V   G  FI  + +P +L K ++  I+    +YG   + +  KV 
Sbjct: 88  VQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVI 146

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  LA+L    G+EV R  Y+ D G Q   LA+    +
Sbjct: 147 IEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERY 206

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEK 228
             ++AL  +    P  +   VY+   K + +E             A +Y   + +  EE 
Sbjct: 207 GNEEALVKD----PIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEA 262

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I D    LNI++D++  E    +     +   ID    +G  +E
Sbjct: 263 -LKIWKRFREFSIEKYI-DTYARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE 317

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER 347
                           DR  +L   T     + + ++ KSDG+  Y   D+     +YE+
Sbjct: 318 ----------------DRGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEK 361

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCEL 388
             FD MIYV+ S    +  +   +   +  + A+                    V L  +
Sbjct: 362 YHFDKMIYVIASQQDLHAAQFFEILKQMGFEWAKDLQLVNFGMVQGMSTRKGTVVFLDNI 421

Query: 389 VRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +   ++ M   M K    +        V D VG  +V    +  K     +F + ++   
Sbjct: 422 LEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSF 481

Query: 446 SKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            + +   Y+QYA++R RS+ R A    +D + + DF L            + +   LI  
Sbjct: 482 -EGDTGPYLQYAHSRLRSVERNASGITQDKWINADFSLLK----------EPAAKLLIRL 530

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L +YP V+ NA    EP  +  YL+ L       +        + +V     +L   RL 
Sbjct: 531 LGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLA 583

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +G+ ++G+     M
Sbjct: 584 LYGAARQVLYNGMRLLGLTPVERM 607


>gi|168178492|ref|ZP_02613156.1| arginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670923|gb|EDT82897.1| arginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 563

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 120/615 (19%), Positives = 238/615 (38%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFQGYNCIGINHLGDWGTQFGKLISAYRRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPE--EKWLPIVKDY 236
             ++AL  +      G    +Y+K         EL  +         E  ++   +   +
Sbjct: 175 VDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNFKRLEEGSKEETELWNRF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L I+ D    E  +       +  ++  +  +G + +       S
Sbjct: 231 K-NLSLKEFNKVYDMLGIKFDSLAGESFY----SDKMDAVVQEIDDKGLLVD-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              + KSDG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  + + K++      +    A     +   +    +    K+S R GD + L  +++
Sbjct: 329 VGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         +G  +V F  L       + FD+ ++     E  
Sbjct: 386 QSVEETLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YV+Y+YAR +SI R+A ++  + D+                 E +L   L  +   I 
Sbjct: 445 GPYVEYSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIM 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           NA    EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I
Sbjct: 495 NAIDKLEPAMVTRYVIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            + LN++G++   EM
Sbjct: 549 KNALNLLGIDVVEEM 563


>gi|170756017|ref|YP_001780705.1| arginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229558755|sp|B1IIE6|SYR_CLOBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169121229|gb|ACA45065.1| arginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 563

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 120/615 (19%), Positives = 238/615 (38%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLISAYRRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPE--EKWLPIVKDY 236
             ++AL  +      G    +Y+K         EL  +         +  E+   +   +
Sbjct: 175 VDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNFKRLEDGSEEETELWNRF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L I+ D    E  +       +  ++  +  +G + +       S
Sbjct: 231 K-DLSLKEFNKVYDMLGIKFDSLAGESFY----SDKMDAVVQEIDDKGLLVD-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              + KSDG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  + + K++      +    A     +   +    +    K+S R GD + L  +++
Sbjct: 329 VGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         +G  +V F  L       + FD+ ++     E  
Sbjct: 386 QSVEETLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YV+Y+YAR +SI R+A ++  + D+                 E +L   L  +   I 
Sbjct: 445 GPYVEYSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIM 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           NA    EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I
Sbjct: 495 NAIDKLEPAMVTRYIIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            + LN++G++   EM
Sbjct: 549 KNALNLLGIDVVEEM 563


>gi|187778219|ref|ZP_02994692.1| hypothetical protein CLOSPO_01811 [Clostridium sporogenes ATCC
           15579]
 gi|187775147|gb|EDU38949.1| hypothetical protein CLOSPO_01811 [Clostridium sporogenes ATCC
           15579]
          Length = 563

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 119/615 (19%), Positives = 240/615 (39%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNIVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  + 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YVNFFVDKTVLIKDVLEKVLSEKEKYGSSKVGEGKNIV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLISAYRRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPE--EKWLPIVKDY 236
             ++AL  +      G    +Y+K         EL  +      N  +  E+   +   +
Sbjct: 175 VDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNFKNLEDGSEEETELWNRF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L I+ D    E  +       +  ++  +  +G + +       S
Sbjct: 231 K-DLSLKEFNKVYDMLGIKFDSLAGESFY----SDKMDAVVQEIDDKGLLVD-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              + KSDG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAKVVMLDEYNI----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  + + K++      +    A     +   +    +    K+S R GD + L  +++
Sbjct: 329 VGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         +G  +V F  L       + FD+ ++     E  
Sbjct: 386 QSVEETLKIINEKNPNLKNKEDTAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YV+Y+YAR +S+ R+A ++  ++D+                 E +L   L  +   I 
Sbjct: 445 GPYVEYSYARGKSVLRKAGELTGEVDYSKLESK----------EEFELAKLLGGFNDAIM 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           NA    EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I
Sbjct: 495 NAINKLEPAMVTRYVIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            + LN++G++   EM
Sbjct: 549 KNALNLLGIDVVEEM 563


>gi|6320548|ref|NP_010628.1| hypothetical protein YDR341C [Saccharomyces cerevisiae S288c]
 gi|2501051|sp|Q05506|SYRC_YEAST RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS
 gi|5821887|pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase
 gi|14719542|pdb|1F7U|A Chain A, Crystal Structure Of The Arginyl-Trna Synthetase Complexed
           With The Trna(Arg) And L-Arg
 gi|14719544|pdb|1F7V|A Chain A, Crystal Structure Of Yeast Arginyl-Trna Synthetase
           Complexed With The Trnaarg
 gi|1230668|gb|AAB64777.1| Ydr341cp [Saccharomyces cerevisiae]
 gi|256269806|gb|EEU05069.1| YDR341C-like protein [Saccharomyces cerevisiae JAY291]
 gi|285811358|tpg|DAA12182.1| TPA: hypothetical protein YDR341C [Saccharomyces cerevisiae S288c]
          Length = 607

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/624 (22%), Positives = 243/624 (38%), Gaps = 90/624 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI      L    +E       G L      +  R  G +P  +A
Sbjct: 30  NIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRL--RIKGANPKDLA 87

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
                +      ++ V   G  FI  + +P +L K ++  I+    +YG   + +  KV 
Sbjct: 88  VQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVI 146

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  LA+L    G+EV R  Y+ D G Q   LA+    +
Sbjct: 147 IEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERY 206

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEK 228
             ++AL  +    P  +   VY+   K + +E             A +Y   + +  EE 
Sbjct: 207 GNEEALVKD----PIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEA 262

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I D    LNI++D++  E    +     +   ID    +G  +E
Sbjct: 263 -LKIWKRFREFSIEKYI-DTYARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE 317

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER 347
                           D+  +L   T     + + ++ KSDG+  Y   D+     +YE+
Sbjct: 318 ----------------DKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEK 361

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCEL 388
             FD MIYV+ S    +  +   +   +  + A+                    V L  +
Sbjct: 362 YHFDKMIYVIASQQDLHAAQFFEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTVVFLDNI 421

Query: 389 VRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +   ++ M   M K    +        V D VG  +V    +  K     +F + ++   
Sbjct: 422 LEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSF 481

Query: 446 SKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            + +   Y+QYA++R RS+ R A    ++ + + DF L            + +   LI  
Sbjct: 482 -EGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLK----------EPAAKLLIRL 530

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L +YP V+ NA    EP  +  YL+ L       +        + +V     +L   RL 
Sbjct: 531 LGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLA 583

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +G+ ++G+     M
Sbjct: 584 LYGAARQVLYNGMRLLGLTPVERM 607


>gi|182417146|ref|ZP_02948519.1| arginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668885|ref|ZP_04528869.1| arginine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378988|gb|EDT76494.1| arginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657233|gb|EEP54789.1| arginine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 562

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/613 (21%), Positives = 237/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  ++   +K+    + +E + +++ +IE P     G  +      LS+ +   P  IA
Sbjct: 2   DYKVKIAELIKQ---HVDLEVEAIEK-LIEIPPKPEMGDYAF-PCFQLSKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +   I      + +   G  ++N ++    + +  L+ ++  G  YG + IG+G  V 
Sbjct: 57  EELKGLID-SEGFERIESLGP-YLNFFVDKGVFAKNTLNKVLEEGDNYGASNIGEGKTVC 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P HVGH     +G++L  +    GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGNSLYKMFKKEGYNTVGLNHLGDWGTQFGKLISAYNRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
             ++AL       P      +Y+K    E A K     L          ++  D    A+
Sbjct: 175 VDEEALEKA----PIDELLRIYVKF--HEEAKK--DPSLEDEARANFKALENGDAEATAL 226

Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
               RD  LK     +DI   + D   G+      +  ++D L  +G + E       S 
Sbjct: 227 WNRFRDLSLKEFERVYDILDVKFDSLNGEAFYNDKMDVVVDELKEKGLLVE-------SN 279

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             Q   ++   +              +LK+DG+  Y   DLA    + +   F   +YV+
Sbjct: 280 GAQVVMLEDYNM----------PPCIVLKADGASIYATRDLAAAMYRKKTYDFHKCVYVV 329

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+  + + K++  V      + A+  V +   +  + D    K+S R G  + L  ++ E
Sbjct: 330 GTPQALHFKQVFKVLDLAGHEWAKDCVHVGFGLVKFADR---KLSTRDGSIVLLDDLLRE 386

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +G  +V F  L     + + FD+ ++     E    
Sbjct: 387 AVEKTMEAIKDKEEIKNKEEVAKKIGVGAVIFTYLKNSREKDIVFDWKEILSFEGE-TGP 445

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQYAYAR  SI  +A +    +D+                 E +L+  L  +  VI  A
Sbjct: 446 YVQYAYARGNSILERAGEFSGSIDYSKLSSK----------EEFELVKSLGNFNNVITLA 495

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  L  Y+ ++A  F+  ++          +   + +L   RL LV A   +I +
Sbjct: 496 LDKLEPSILTRYVIEVAKGFNKFYNAH------SVLNLEDEELKRARLNLVKASLQVIKN 549

Query: 573 GLNIIGVESPNEM 585
           GL ++G+    +M
Sbjct: 550 GLELLGIGVVEKM 562


>gi|228907938|ref|ZP_04071789.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228851697|gb|EEM96500.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 562

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 236/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V  AG  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKLN-DPFFTKVE-AGGPYVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L                  ++  L ++P+VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALKG-----------DHSWSVVKLLNKFPQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             +    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESEEKDSRLALVYAVTVVLEEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|228927257|ref|ZP_04090319.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121744|ref|ZP_04250965.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228661660|gb|EEL17279.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228832404|gb|EEM77979.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 562

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/613 (22%), Positives = 235/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+       L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N+Y +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEVAQKL-SDPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTFSFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEIA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R       +   N +    RL LV+AV  ++  
Sbjct: 498 FNKNEPSVISKYVLDVAQSFNKYYGNVR-------ILDENAE-KDSRLALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|228920921|ref|ZP_04084259.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838710|gb|EEM84013.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 562

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 235/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSFISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|151942316|gb|EDN60672.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|323334169|gb|EGA75553.1| YDR341C-like protein [Saccharomyces cerevisiae AWRI796]
          Length = 607

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/624 (22%), Positives = 243/624 (38%), Gaps = 90/624 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI      L    +E       G L      +  R  G +P  +A
Sbjct: 30  NIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRL--RIKGANPKDLA 87

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
                +      ++ V   G  FI  + +P +L K ++  I+    +YG   + +  KV 
Sbjct: 88  VQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVI 146

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  LA+L    G+EV R  Y+ D G Q   LA+    +
Sbjct: 147 IEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERY 206

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEK 228
             ++AL  +    P  +   VY+   K + +E             A +Y   + +  EE 
Sbjct: 207 GNEEALVKD----PIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEA 262

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I D    LNI++D++  E    +     +   ID    +G  +E
Sbjct: 263 -LKIWKRFREFSIEKYI-DTYARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE 317

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER 347
                           D+  +L   T     + + ++ KSDG+  Y   D+     +YE+
Sbjct: 318 ----------------DKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEK 361

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCEL 388
             FD MIYV+ S    +  +   +   +  + A+                    V L  +
Sbjct: 362 YHFDKMIYVIASQQDLHAAQFFEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTVVFLDNI 421

Query: 389 VRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +   ++ M   M K    +        V D VG  +V    +  K     +F + ++   
Sbjct: 422 LEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSF 481

Query: 446 SKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            + +   Y+QYA++R RS+ R A    +D + + DF L            + +   LI  
Sbjct: 482 -EGDTGPYLQYAHSRLRSVERNASGITQDKWINADFSLLK----------EPAAKLLIRL 530

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L +YP V+ NA    EP  +  YL+ L       +        + +V     +L   RL 
Sbjct: 531 LGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLA 583

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +G+ ++G+     M
Sbjct: 584 LYGAARQVLYNGMRLLGLTPVERM 607


>gi|116495209|ref|YP_806943.1| arginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116105359|gb|ABJ70501.1| arginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 560

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/610 (21%), Positives = 238/610 (39%), Gaps = 81/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L+           I  + +IE P+    G  +      L++ +   P  IA
Sbjct: 2   DFKELVVKALEPALAGQLDAAAI--KSLIETPKSSDLGDYAFP-TFSLAKIMHRAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +V +I + P  + V   G G++N YL        +  ++    E+  +       V I
Sbjct: 59  SDLVGQIDVTP-FEKVKAVG-GYVNFYLDKISFAHDVLKVIAQAGEHYGDANIGSGNVPI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+ LA++++  GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPMSMGHLRSTVIGNALANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFP--EEKWLPIVKDYSVQAM 241
            + A+  +       YY   + K     EL D+  +        +E+ + + + +   ++
Sbjct: 177 SEDAVKADPIKNLLHYYVEFHEKAEANPELDDEARAWFKRLEDGDEEAIALWRWFRTVSL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  ++      + D++  L  +  +         S+  + 
Sbjct: 237 AEFNRI-YKILGVDFDSYNGEAFYN----DKMADVVKRLEDKHLL-------KTSQGAEI 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    + E   F   +YV+G++ 
Sbjct: 285 VDLSAYNL----------NPALIKKSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQ 334

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
             + ++L+AV   +    A     +   +         K+S R G+ I L +V+      
Sbjct: 335 REHFQQLKAVLLEMGYDWANDIHHIPFGLITANGK---KLSTRKGNIILLENVLRDAVGL 391

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                               EVG  +V F  L  +  +  DF+  +V     E    YVQ
Sbjct: 392 AKQQIAEKHPDLPNADKVAHEVGVGAVIFHDLKNERLDNFDFNLEEVVRFEGE-TGPYVQ 450

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR  SI R+A              +  P+ +  D +   ++  L +YP ++  A   
Sbjct: 451 YTNARANSILRKAAI------------DPAPEVALSDPAAWDVLRALGDYPSMVLRAAKE 498

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y   LA  F+ ++++ +       V   + +L   RL +V A   ++ + L 
Sbjct: 499 YEPSVIAKYALRLAKAFNKYYANVK-------VLVEDSEL-PARLAMVKATTQVLTNALQ 550

Query: 576 IIGVESPNEM 585
           ++GV +P EM
Sbjct: 551 LLGVGAPEEM 560


>gi|78213959|ref|YP_382738.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|109895048|sp|Q3AGU9|SYR_SYNSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78198418|gb|ABB36183.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 590

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/615 (22%), Positives = 228/615 (37%), Gaps = 100/615 (16%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A   + ++    E D  +  +     +           G    N A+ L++PL   P  I
Sbjct: 10  AQLRAAMQRAFPEADAGLDPQLASASK--------QEFGDFQANGALPLAKPLKQAPRQI 61

Query: 65  AELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           A  IV +++ DP          IAG GFINL + P  L   +S+ +      G   +   
Sbjct: 62  ATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGD-ERLGVPAVSNA 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   
Sbjct: 121 APVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITH 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +AL   D+              +G +L   Y      F +++         V  
Sbjct: 181 LKQVAPEALDTADA------------VDLG-DLVAFYREAKKRFDDDEAFQSTSRDEVVK 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN-LARQGYVYEGILPPPKSKTT 299
           +       LKA  +  D         R +   I D +D  L+ +G  +     P      
Sbjct: 228 LQGGDPVSLKAWGLLCDQ-------SRREFQKIYDRLDILLSERGESFYNPFLPAVIDGL 280

Query: 300 QKCDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-----ER 347
           +  ++    D  Q +F   + G D   +   + KSDG + Y   DLA  + ++       
Sbjct: 281 KAAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGGFNYATTDLAAIRYRFGAAPEGD 340

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G   ++YV  +  + +   +  VA         A++  +   LV+   DG   K+  RAG
Sbjct: 341 GARRVVYVTDAGQANHFAGVFQVAERAGWIPDGARLEHVPFGLVQ-GEDGK--KLKTRAG 397

Query: 406 DFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSEL 434
           D + LR ++DE                               VG  +V++  L +     
Sbjct: 398 DTVRLRDLLDEAVERAETDLRSRLKEEERSESEEFIQHVAGTVGLAAVKYADLSQNRITN 457

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             F F ++    + N   Y+ YA  R   I R+          DL   N   Q SE    
Sbjct: 458 YQFSFDRMLAL-QGNTAPYLLYAVVRIAGIARKGG--------DLAATNAQLQFSE--PQ 506

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+  L ++  VI        P +L  YL++L+ VF+  +       ++  ++A+   
Sbjct: 507 EWALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKADPEA 560

Query: 555 LTMMRLQLVHAVASI 569
           L   RL L    A  
Sbjct: 561 L-ASRLALCRLTADT 574


>gi|150015905|ref|YP_001308159.1| arginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189083528|sp|A6LS73|SYR_CLOB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149902370|gb|ABR33203.1| arginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 563

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 123/611 (20%), Positives = 234/611 (38%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ S++   +K+    +++E + +++ +IE P     G  +      LS+ +   P  IA
Sbjct: 2   DYKSKVAELIKK---HVELEIEAIEK-LIEIPPKPEMGDYAF-PCFQLSKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +   +  D   + +   G  ++N ++    +    +   +  G  YG + IG+G  V 
Sbjct: 57  EELKNSMSTDG-FERIENLGP-YVNFFVDKGVFAENTIKKALEDGENYGASNIGEGKTVC 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P HVGH     +G++L  +    GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGNSLYKMFKKEGYNTVGLNHLGDWGTQFGKLISAYDRW 174

Query: 184 RYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             ++AL     D     Y        K    E   + + + L   +EK   +   +    
Sbjct: 175 VDEEALEKAPIDELLRIYVKFHEEAEKDPSLEDEARANFKALETGDEKATALWTRFR-DL 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K        L ++ D    E  ++      +  +++ L  +G + E       S   Q
Sbjct: 234 SLKEFERVYNILGVKFDSLAGEAFYN----DKMDVVVNELKEKGLLVE-------SNGAQ 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              ++   +              +LK DG+  Y   DLA    + +   F   +YV+G+ 
Sbjct: 283 VVMLEEYNM----------PPCIVLKGDGASIYATRDLAAAMYRKKTYDFHKCVYVVGTP 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K++  V      + A+  V +   +  + D    K+S R G  + L  ++ E   
Sbjct: 333 QALHFKQVFKVLELAGHEWAKDCVHVGFGLVKFADR---KLSTRNGSIVLLDDLLREAVE 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 +G  +V F  L     + + FD+ ++     E    YV
Sbjct: 390 KTMEVINEKNPELENKEEVAKKIGVGAVIFTYLKNSREKDIVFDWKEILSFDGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY+YAR  SI  + K+    +D+                 E +L+  +A +  VI  A  
Sbjct: 449 QYSYARGNSILNRGKECTGTVDYSKLSSK----------EEFELVKSIANFNSVITLALD 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  L  Y+ ++A  F+  ++          +   +  L   RL LV A   +I +GL
Sbjct: 499 KLEPSILTRYVIEVAKGFNKFYNAH------SVLNLEDEDLKATRLNLVKASLQVIKNGL 552

Query: 575 NIIGVESPNEM 585
            ++G++   +M
Sbjct: 553 ELLGIDVVEKM 563


>gi|225028848|ref|ZP_03718040.1| hypothetical protein EUBHAL_03135 [Eubacterium hallii DSM 3353]
 gi|224953844|gb|EEG35053.1| hypothetical protein EUBHAL_03135 [Eubacterium hallii DSM 3353]
          Length = 564

 Score =  378 bits (972), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/613 (21%), Positives = 245/613 (39%), Gaps = 83/613 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ + L E    I+   K      +E P+    G  +      L+R     P  IAE
Sbjct: 1   MKNKIIDILSE---NIEQLDKEEIAAALEIPKKTDMGDFAFP-CFKLARVFRKAPNMIAE 56

Query: 67  LIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            + A+I  K     D V   G  +IN +L+     K + + V    ++G+   G+G  V 
Sbjct: 57  ELTAQINEKGYDIFDKVVNVGA-YINFFLAKEAFAKEIMNTV-DTPDFGQGTEGEGKTVC 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I++ S N     HVGH R  ++G++L  + +  GY V R  ++ D G Q   L ++   W
Sbjct: 115 IDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYHVERINHLGDWGTQFGKLIVAYKKW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             ++A+  N  D     Y   + +    + L D+     +     +E+ L I + +   +
Sbjct: 175 GSKEAVEENGIDELMKIYVKFHQEAEKDDSLNDQAREWFVKMEQGDEEALSIWQWFKDIS 234

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++  +   K L +  D F  E  +         ++++ L  +  + E       S+   
Sbjct: 235 LVEY-KRIYKLLGMDFDHFTGESFY----RDKTHEVVEKLQEKDLLVE-------SEGAH 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
              +D            D     ++K DGS  Y   DLA    +     FD  IYV G +
Sbjct: 283 IVPLDDY----------DMAPCLIMKKDGSSIYATRDLAALLYRKRTYNFDKCIYVTGLE 332

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              +  ++  V   +     Q  V +   +     G   K+S R G+ I    ++ E   
Sbjct: 333 QKLHFAQVFKVIELLGYDWYQNLVHVPYGLVSMEGG---KLSTRNGNVIYAEQILHEAIE 389

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  ++ F  L+ +  + + F++ K+     E    YV
Sbjct: 390 KIHEIINEKNPDLPNKEEVSRQVGIGAILFNDLYNQRIKDVIFNWDKILNFDGE-TGPYV 448

Query: 455 QYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           QY YARC S+FR+  A ++  ++D+ +            D + + L+  L  +P VI+ A
Sbjct: 449 QYTYARCASVFRKVGAVELPAEIDYSVLT----------DDATMNLLKDLTRFPEVIKEA 498

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP+ +A +   +A  F+  +   +       +      + + RL++V     +I S
Sbjct: 499 ADKYEPFMIARFAVSVAQHFNKFYHDCQ-------INVEEENVKLARLKVVDVTMKVIKS 551

Query: 573 GLNIIGVESPNEM 585
            L+++G+E P +M
Sbjct: 552 ALDLLGIECPEQM 564


>gi|260589619|ref|ZP_05855532.1| arginine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260539859|gb|EEX20428.1| arginine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 588

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 120/634 (18%), Positives = 239/634 (37%), Gaps = 98/634 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                 +++  +KE     + ++K     V  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIIEKIEEAVKEAFAASEYDEKFAKVTVSNRPDLCE---YQCNGAMAAAKTYKKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V +++ +   +S      GFINL L+  +L   L+ ++    +           +
Sbjct: 58  IANSVVEKLQDNEIFESAEAVNPGFINLKLNKEFLSGYLNDMLAD-EKLSVEEAKNPKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 VIDYGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIITELSK 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELAD------------KYSSELLNFPEEKWLP 231
           R    +Y +++      Y G Y K     +++            K      N   E  L 
Sbjct: 177 RQPDLVYFDEN------YEGEYPKEAPFTVSELEEIYPTASGKSKEDEAYKNEALEATLQ 230

Query: 232 IVK-DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           + K     +A+ + I        + +   L +  D++  E D        I  ++D L  
Sbjct: 231 LQKGRRGYRALWQHIMEVSVTDLKKNYAKLKVDFDLWKGEADADAY----IPAMVDYLKE 286

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLA 339
            GY Y                +D+  L+       D  + P   +LKSDG+  Y   DLA
Sbjct: 287 NGYAY----------------LDQGALVVDVKEETDTKEIPPCMILKSDGASLYNTTDLA 330

Query: 340 YFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMP 397
               + E    D +IYV+      +  ++   A           +       +  +DG P
Sbjct: 331 TIVQRMEDYKPDEIIYVVDKRQELHFVQVFRCAKKAKLVDENTQLSFVGFGTMNGKDGKP 390

Query: 398 IKMSKRAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKN 431
            K   R G  + L  ++ E                          VG  ++++  L  + 
Sbjct: 391 FK--TREGGVMRLERLIAEINEEMFKKITENRSVKDENAEKTAQMVGLSAIKYGDLSNQA 448

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           S+   FD  +     + N   Y+ Y   R +SI  +  +   ++D       V       
Sbjct: 449 SKDYVFDIERFTSF-EGNTGPYILYTIVRIKSILSRYAESGKNIDKKAMKAAV------- 500

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           + SE  L++ L+ +  +I  A   + P+++  Y+YDLA+ F+  +         + +   
Sbjct: 501 NDSEKALMLELSRFNSIIAPAFEEKAPHRICSYIYDLANAFNSFYH------ETKILSEE 554

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + L+     ++ + ++++G ++P+ M
Sbjct: 555 DEDKKASWICLLTLTEKVLETCIDLLGFDAPDRM 588


>gi|229102811|ref|ZP_04233507.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228680596|gb|EEL34777.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 562

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/613 (22%), Positives = 234/613 (38%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+    + + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +     FD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P+VIE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESKEKDSRLVLVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|229127604|ref|ZP_04256593.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|228655681|gb|EEL11530.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 562

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 235/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    R+ LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRIALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|254519810|ref|ZP_05131866.1| arginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913559|gb|EEH98760.1| arginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 563

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/613 (21%), Positives = 241/613 (39%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D+  ++   + + +D  I+  +K     +IE P     G  +      L++     P  I
Sbjct: 2   DYKKKVAEAISKYVDMDIENIEK-----LIEIPPKSDMGDYAF-PCFQLAKTFRKAPNMI 55

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +E +  +I  D   + +   G  ++N +   S + +  +  ++  G EYG + +G+G  +
Sbjct: 56  SEELAGKIDNDG-FEKIINVGP-YVNFFADKSVFTKNTIEKVLAEGDEYGSSNVGEGKTI 113

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF- 182
            +E+ S N   P HVGH     +G++L  +    GY V    ++ D G Q   L  +   
Sbjct: 114 CVEYSSPNIAKPFHVGHLFTTAIGNSLYKIFKKEGYTVEGINHLGDWGTQFGKLISAYKR 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W  ++AL  N  D     Y   + +     L +          E+       D  V+A+ 
Sbjct: 174 WGNEEALEKNAIDELLRIYVKFHDEAEKDPLLEDEGRAYFKALEDG------DKEVEALW 227

Query: 243 KIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
           K  RD  LK     ++IF  + D + G+      +  +++ L  +  + E       S  
Sbjct: 228 KRFRDLSLKEFERIYEIFDVKFDSYAGEAFYNDKMDVVVNELKEKNLLVE-------SNG 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            Q   +D   +              +LK DG+  Y   DLA    + ++  F   IYV+G
Sbjct: 281 AQVVMLDEYNM----------PPCIVLKGDGASIYATRDLAAAMYRKKKYDFYKSIYVVG 330

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  + + K++  V      + A+  V +   +  + D    K+S R G+ I L  ++ E 
Sbjct: 331 TPQALHFKQVFKVLELAGHEWAKDCVHVGFGLVKFADR---KLSTRKGEVILLDDLIKES 387

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +G  +V F  L     + + FD+ ++     E    
Sbjct: 388 IDKTLEVINEKNPNLDNKEEVAKKIGVGAVVFTYLKNSREKDIVFDWKEMLSFDGE-TGP 446

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY+YAR  SI  +A  +  + D+                 E +L+  L  + + I  A
Sbjct: 447 YVQYSYARANSILTRAGGLKGNADYSKLSSK----------EEFELVKALEGFAKQIHLA 496

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           T   EP  +  Y  ++A  F+  ++          +   + +L   RL LV A   +I +
Sbjct: 497 TEKLEPSIVTRYAIEVAKSFNKFYNAH------SVLNLEDEELKEARLSLVKATCQVIKN 550

Query: 573 GLNIIGVESPNEM 585
            L ++G+E  ++M
Sbjct: 551 SLALLGIEVVDKM 563


>gi|225154902|ref|ZP_03723400.1| Arginine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224804432|gb|EEG22657.1| Arginine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 606

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/596 (21%), Positives = 220/596 (36%), Gaps = 69/596 (11%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFINLYLS 94
           R  D  HG    N  +  ++    +P  +AE + A +      D  + IAG GFIN  L 
Sbjct: 34  RTADPKHGDYQANGVLGYAKREKQNPRALAEKLTAALPPPLRADFDITIAGPGFINFTLR 93

Query: 95  PSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           PS  +  L++      +  G      G    +++ S N    MHVGH R AV+G+ +  L
Sbjct: 94  PSAAQAWLNAYGTRQKLGAGAAAACAGQTWVVDYSSPNTAKQMHVGHLRSAVIGEAICRL 153

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYP-GVYLKHVGK 211
           +AF+G  V R+ ++ D G Q   L      W   + L +   +  E  Y  G      G 
Sbjct: 154 LAFAGARVIRDNHLGDWGTQFGKLIYGYKRWVNPEKLASEPIEELERLYKLGNNATPEGS 213

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              ++   EL+     +   + + K +S  ++          L I+ D  + E  ++   
Sbjct: 214 PELEEARQELVKLQTGDPANVALWKKFSDISLAAFQ-QIYDRLGIRFDHTLGESFYN--- 269

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSD 328
                D +D      +VY  +            +     ++F             + K+D
Sbjct: 270 -----DKVD------HVYSELTDTTLPGGALAVESQGALVVFHPEHPRFKTQPFIIRKTD 318

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQINV 383
           G+  Y   DLA    + E    D + YV       + ++L             +  ++  
Sbjct: 319 GASNYATTDLATALYRIEEFHADGIAYVTDFRQGDHFEQLFLTVKKWFEKTGRRAPRLEH 378

Query: 384 LLCELVR-------LYRDGMPIKMSK-------RAGDFIT----------------LRHV 413
           +    V          RDG  +K+         RA   +T                 R +
Sbjct: 379 VSFGAVTGEDGKALKTRDGETVKLKSLLNEAEDRAFALVTAKNAERPEGERFTEAECREI 438

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  SV++  L +  S    F + K+      N   Y+ YA AR RSIFR+     P
Sbjct: 439 ARAVGVGSVQYADLSQNRSSNYVFSWDKMLALD-GNTAPYLLYAVARIRSIFRKLGLPPP 497

Query: 474 DL---DFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D    D      +     S+ +  +E+ L   L + P  +  AT    P+ L  YLY+LA
Sbjct: 498 DQESGDEGQRAEDYAAAASQIETPAEMSLARKLVKLPDTLALATGQLRPHFLCLYLYELA 557

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             F   ++  +       V  ++  +   RL L      ++ +GL+++G+ +   M
Sbjct: 558 GEFSAFYAAEK-------VAVDDPAVRARRLLLCARTLLVLETGLHLLGLRTLERM 606


>gi|229190292|ref|ZP_04317293.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228593076|gb|EEK50894.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 562

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/611 (21%), Positives = 233/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   D     V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DQFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P+VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R                  RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESAEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|227485245|ref|ZP_03915561.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236705|gb|EEI86720.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 565

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/612 (21%), Positives = 233/612 (38%), Gaps = 77/612 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D+   +   L      I +  + + + +IE P     G  S      L++ L  +P  
Sbjct: 1   MKDYKEIIAKKLD--SQGIGISSEDIYQ-LIEIPPQENMGDYSFP-CFQLAKTLRKNPAQ 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IA  + + + ID   + +   G  +IN +L    +   ++++I+     YG++ +GKG  
Sbjct: 57  IAAELASTLVIDDFSE-IKNVGP-YINFFLDRKKFENDVINAIIDKKENYGKSDMGKGKT 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSV 181
             +EF S N   P H+GH R  V+GD L ++  F GY      YI D G Q    +A   
Sbjct: 115 AIVEFSSVNIAKPFHIGHIRSTVIGDALRNIHEFLGYNTIATNYIGDYGTQFGTMIAAYK 174

Query: 182 FWRYQQALYNNDSDLPEGYYPG----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            W   + L  N        Y              E+A K     L   EE+   +   + 
Sbjct: 175 LWGDDEKLNANPIKELLNLYVRYNTEASENEEMMEVARKEFKN-LEEGEEEATRLWSWFK 233

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             +  +  R   K L+I+ D +  E  + +  P                    +     +
Sbjct: 234 EISFNEFDRV-YKLLDIEFDNYKGEAYYSKYMPE-------------------ILEELKE 273

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVM 356
                + D  Q++  +    D     ++KS+GS  Y   D+A     K E  FD  +YV+
Sbjct: 274 KKLLVESDGAQIIDLAQF--DLPPSIIIKSNGSSAYITRDIATAINRKKEYNFDENLYVV 331

Query: 357 GSDHSGYVKRLEAVAAAVSEK-----------------------KAQINVLLCELVRLYR 393
            +  + + ++L  +   +                          K Q+ V L +++    
Sbjct: 332 ATQQNLHFQQLWRILELMGYDLYKGCKHISFGMVSLKDQTLSTRKGQV-VFLEDVLNKAI 390

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +     M  R      +  V   VG  +V+F  L+    +   FD+ +V     E    Y
Sbjct: 391 EKTREIMENREDTVDDIGEVSRIVGIGAVKFQELYNNRIKDYVFDWDEVLNFDGE-TGPY 449

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY YAR +S+ R+A          L     +  E      E  L+  LA +  V+  A 
Sbjct: 450 VQYTYARAKSVLRKAG---------LGEIKPLAIEKITSDEEFSLVKKLAGFEDVVVKAK 500

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +  +L D+A  F+  ++  +       +   + KL   RL L +A + +I +G
Sbjct: 501 EKYEPSLVTRHLTDIAKSFNKFYNSSK-------IMVEDEKLKEERLALAYATSVVIKTG 553

Query: 574 LNIIGVESPNEM 585
           L ++G+++  +M
Sbjct: 554 LGLLGIKTVEKM 565


>gi|331083052|ref|ZP_08332169.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330405054|gb|EGG84591.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 588

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 120/634 (18%), Positives = 239/634 (37%), Gaps = 98/634 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                 +++  +KE     + ++K     V  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIIEKIEEAVKEAFAASEYDEKFAKVTVSNRPDLCE---YQCNGAMAAAKTYKKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V +++ +   +S      GFINL L+  +L   L+ ++    +           +
Sbjct: 58  IANSVVEKLQDNEMFESAEAVNPGFINLKLNKEFLSGYLNDMLAD-EKLSVEEAENPKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 VIDYGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIITELSK 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELAD------------KYSSELLNFPEEKWLP 231
           R    +Y +++      Y G Y K     +++            K      N   E  L 
Sbjct: 177 RQPDLVYFDEN------YEGEYPKEAPFTVSELEEIYPTASGKSKEDEAYKNEALEATLQ 230

Query: 232 IVK-DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           + K     +A+ + I        + +   L +  D++  E D        I  ++D L  
Sbjct: 231 LQKGRRGYRALWQHIMEVSVTDLKKNYAKLKVDFDLWKGEADADAY----IPAMVDYLKE 286

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLA 339
            GY Y                +D+  L+       D  + P   +LKSDG+  Y   DLA
Sbjct: 287 NGYAY----------------LDQGALVVDVKEETDTKEIPPCMILKSDGASLYNTTDLA 330

Query: 340 YFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMP 397
               + E    D +IYV+      +  ++   A           +       +  +DG P
Sbjct: 331 TIVQRMEDYKPDEIIYVVDKRQELHFVQVFRCAKKAKLVDENTQLSFVGFGTMNGKDGKP 390

Query: 398 IKMSKRAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKN 431
            K   R G  + L  ++ E                          VG  ++++  L  + 
Sbjct: 391 FK--TREGGVMRLERLIAEINEEMFKKITENRSVKDENAEKTAQMVGLSAIKYGDLSNQA 448

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           S+   FD  +     + N   Y+ Y   R +SI  +  +   ++D       V       
Sbjct: 449 SKDYVFDIERFTSF-EGNTGPYILYTIVRIKSILSRYAESGKNIDKKAMKAAV------- 500

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           + SE  L++ L+ +  +I  A   + P+++  Y+YDLA+ F+  +         + +   
Sbjct: 501 NDSEKALMLELSRFNSIIAPAFEEKAPHRICSYIYDLANAFNSFYH------ETKILSEE 554

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       + L+     ++ + ++++G ++P+ M
Sbjct: 555 DEDKKASWICLLTLTEKVLETCIDLLGFDAPDRM 588


>gi|229043945|ref|ZP_04191639.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228725385|gb|EEL76648.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 562

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 234/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P+VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GV +P EM
Sbjct: 552 RLLGVGAPEEM 562


>gi|332532695|ref|ZP_08408571.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037911|gb|EGI74360.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 580

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 240/617 (38%), Gaps = 69/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  +  +      E          RP+    G    NAAM  ++ +  +
Sbjct: 1   MNIRTIL---IEKAIAAMVGAGLPEDTNPAVTQSTRPQ---FGDYQINAAMGAAKKMKSN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+  + +        IAG GFIN++L P +L + + +   +  +   N   K 
Sbjct: 55  PRELAQKIIDNLDVSDIAQKTEIAGPGFINIHLKPEFLAQSVKA-ANNDAKLAVNEHAKP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +++ S N    MHVGH R  ++GD++   + F G  V R+ ++ D G Q   L   
Sbjct: 114 QKVVVDYSSPNLAKEMHVGHLRSTIIGDSIVRALEFRGDTVVRQNHMGDWGTQFGMLIAH 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +  Q +  +   L +               A K   +   F ++    +VK     A
Sbjct: 174 LEDQISQGVDLDTVALAD--------LETFYRDAKKRFDDEEGFADKARDYVVKLQGGDA 225

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +     A +++H    SE+ + R + +  +  I   +        I+   K K   
Sbjct: 226 HCEKLWKLFIATSVKH----SEEVYKRLNVTLTQADIMAESAYNAELNDIISLLKDKNIA 281

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
             +    Q++F    +   G+     + KS G + Y   DLA    +  + G D ++  +
Sbjct: 282 -VESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLGADRILIFV 340

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK-MSKRAGDFITLRHVVD 415
            +  + +  ++E  A      + + +   C    +   G   K    R G  + L  +++
Sbjct: 341 DARQNLHFNQVELTARKAGLLRDETSYEFCPFGTMM--GADNKPFKTRTGGTVKLADLLE 398

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    F++  +    + 
Sbjct: 399 ESINRAAAKLAERESDLSDSDRSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSF-EG 457

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               Y+QYAY R RSIFR++      L+ D+       +       +L+ ++ L     +
Sbjct: 458 ATAPYLQYAYTRVRSIFRKSGVDAATLNSDVAIVEPQEKALALKLLQLEEVLDL-----M 512

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A     P+ L  YLY+LAS++   +      P L+  +     +   RL L + V+ 
Sbjct: 513 ISEA----TPHVLCGYLYELASLYMTFYEAC---PVLK--EGVEPSVRDSRLVLCNLVSR 563

Query: 569 IINSGLNIIGVESPNEM 585
            + +GL+++G+E   +M
Sbjct: 564 TLETGLDLLGIEVMEQM 580


>gi|153939026|ref|YP_001390429.1| arginyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166232779|sp|A7GCB9|SYR_CLOBL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152934922|gb|ABS40420.1| arginine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318516|gb|ADF98893.1| arginine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 563

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 120/615 (19%), Positives = 239/615 (38%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLISAYRRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPE--EKWLPIVKDY 236
             ++AL  +      G    +Y+K         EL  +      N  +  ++   +   +
Sbjct: 175 VDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNFKNLEDGSKEETELWNRF 230

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +K        L I+ D    E  +       +  ++  +  +G + +       S
Sbjct: 231 K-DLSLKEFNKVYDMLGIKFDSLAGESFY----SDKMDAVVQEIDDKGLLVD-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              +   +D   +              + KSDG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAKVVMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G+  + + K++      +    A     +   +    +    K+S R GD + L  +++
Sbjct: 329 VGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLN 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         +G  +V F  L       + FD+ ++     E  
Sbjct: 386 QSVEETLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YV+Y+YAR +SI R+A ++  + D+                 E +L   L  +   I 
Sbjct: 445 GPYVEYSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIM 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           NA    EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I
Sbjct: 495 NAIDKLEPAMVTRYIIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            + LN++G++   EM
Sbjct: 549 KNALNLLGIDVVEEM 563


>gi|206971991|ref|ZP_03232939.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732914|gb|EDZ50088.1| arginyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 562

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/611 (21%), Positives = 234/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFVESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK     +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFARIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P+VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTFVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|194476818|ref|YP_002048997.1| arginyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191825|gb|ACB42787.1| arginyl-tRNA synthetase [Paulinella chromatophora]
          Length = 602

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/632 (21%), Positives = 233/632 (36%), Gaps = 94/632 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + ++N   E         K LD  +I   +    G    N  + LS+ LG  P  IA 
Sbjct: 12  LLTAMENMFPEAVILATDSGKPLDPQLIIASK-PEFGDFQVNGPLALSKILGKPPRKIAT 70

Query: 67  LIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGK 119
            +V  +              IAG GFINL L P  L+  +  ++ +   G+         
Sbjct: 71  DLVNALLAIPSFSELCSPPIIAGPGFINLVLKPELLKSEIRKVLSNPNIGVPNVTETEDH 130

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V I+F S N    MHVGH R  ++GD LA ++ F GY V R  ++ D G Q   L  
Sbjct: 131 LFPVIIDFSSPNIAKDMHVGHLRSTLIGDCLARILEFRGYNVLRLNHVGDWGTQFGMLIT 190

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +     QAL N D            +  +G +L   Y      F  ++   I     V 
Sbjct: 191 HLKQVAPQALINPD------------VIELG-DLVAFYRQAKNRFDNDQSFQIASREEVV 237

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY-----EGILPP 293
            +     D  KA  +  D         R +   I D +D  +  +G  +     E ++  
Sbjct: 238 RLQSGDPDSRKAWQLLCDQ-------SRREFQVIYDRLDITITERGESFYNSYLEEVILD 290

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-----E 346
             +      D   + +     M   +   P++  KSDG + Y   DLA  + ++      
Sbjct: 291 LDALDLLVTDEGARCVFLEGVMGKSNKPLPVIIQKSDGGFNYATTDLAAIRYRFGVIFEG 350

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRA 404
            G   ++YV  S  + +   +  +A          ++  +   LV+  +DG   K+  RA
Sbjct: 351 DGASRIVYVTDSGQANHFAGIFQIARRAGWVPTNGRLEHVPFGLVQ-GQDGK--KLKTRA 407

Query: 405 GDFITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSE 433
           GD + L+ ++DE                               VG  +V++  L +    
Sbjct: 408 GDTVRLKDLLDEAIERADIDLRKRLAEENRSEEEIFIKDVSKKVGIAAVKYADLSQNRIT 467

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F+F ++      N   Y+ YA  R   I R++      L+          Q    + 
Sbjct: 468 SYQFNFDRMLSL-NGNTAPYLLYAMVRIAGILRKSSKQHDTLE---------KQLHFSEP 517

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E  L+ H+  +  +I        P +L  YL++L+ +F+  +       ++  ++A   
Sbjct: 518 IEWALVRHILRFDLIIIEVEEELLPSRLCSYLFELSQLFNRFYD------QVPVLKAKEP 571

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L+  RL L    A  +  GLN++G+ +   M
Sbjct: 572 NLS-SRLILCQLTADTLKMGLNLLGIPTLERM 602


>gi|66501636|ref|XP_623301.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Apis mellifera]
          Length = 674

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/610 (22%), Positives = 251/610 (41%), Gaps = 72/610 (11%)

Query: 15  LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIV 69
           L E    I         ++I    +   G    N+AM L + L        P  +A  I+
Sbjct: 98  LFEKAISIAYPNVCEPPVIISISTNPKFGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIM 157

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           ++I+    V  + +AG GFIN+YL   +++ ILS++V +G  +      K  +V ++F S
Sbjct: 158 SKIEESSLVSKLEVAGAGFINIYLKKEFIQIILSTLVKNGKVFP--PYTKKQRVIVDFSS 215

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N    MHVGH R  ++GD++A L+ F G++V R  ++ D G Q   L   +  R+   L
Sbjct: 216 PNIAKEMHVGHLRSTIIGDSIARLLEFLGHDVLRINHVGDWGTQFGMLIAHLQNRFPDYL 275

Query: 190 YNNDSDL-PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             +   +  + +Y     +    E   K++   +   +     I K  + Q +  + R +
Sbjct: 276 TISPPIIDLQSFYKESKARFDKDEEFKKHAYNCVVKLQTFDPEITK--AWQLICDVSRKE 333

Query: 249 LKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            + + ++ DI + E    F++     +  I+ +L  +G + +              D  R
Sbjct: 334 FEKIYVRLDINLIERGESFYQK---HMEVIVKDLETKGLLED--------------DEGR 376

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVK 365
           K +  +      ++   ++KSDG +TY  +D+A  K + E    D +IYV  +  + + +
Sbjct: 377 KIMWGKRNN---EIPLTIVKSDGGFTYDTSDMAALKQRIEEERADWIIYVTDAGQAKHFQ 433

Query: 366 RLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
            L++ A      K+   +  +   V L +D    K   R+GD + L  ++DE        
Sbjct: 434 ILKSCAERAGIIKSYHRIDHVGFGVVLGKDKK--KFKTRSGDTVKLSDLLDEGLKRALDK 491

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +    +++  L    +    F F K+ E  K N   Y+ 
Sbjct: 492 LKEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYVFSFDKMLE-DKGNTAVYLL 550

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA  R RSI R A +I  +   +L   N I  E E    E +L   L ++  V+   T  
Sbjct: 551 YALTRIRSIAR-AANITQNKLQELAQSNQISLEHE---KEWKLAKVLIKFADVLIKITKD 606

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
              ++L  Y Y+++  F   + +       +        + + R+ L  A A I+    +
Sbjct: 607 LYLHQLCEYCYEISCTFSEFYDNCYC--VEKNELGEIVNINIGRMLLTEATAIIMEKCFS 664

Query: 576 IIGVESPNEM 585
           I+G++    M
Sbjct: 665 ILGLKPVARM 674


>gi|28378123|ref|NP_785015.1| arginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556331|ref|YP_003062748.1| arginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|38258334|sp|Q88X53|SYR_LACPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|28270958|emb|CAD63862.1| arginine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045258|gb|ACT62051.1| arginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 562

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/592 (21%), Positives = 248/592 (41%), Gaps = 80/592 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           ++ ILD+  IE+P+    G L+      L++ L   P  IA  IV ++      + V   
Sbjct: 20  QEAILDK--IEQPKTSKQGDLAF-PTFTLAKTLHKAPQMIASDIVEKVDSSD-FEKVVAM 75

Query: 85  GKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           G  ++N +    ++   IL+ ++ +G  +G   +G+  +V I+  S N   P+ +GH R 
Sbjct: 76  GP-YVNFFFKKDAFAADILNQVLSNGGHFGDAKLGEAGQVPIDMSSPNIAKPISMGHLRS 134

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP 202
            V+G++LA++++   Y+  +  ++ D G Q   L  +   W  +  +  +  +    YY 
Sbjct: 135 TVIGNSLANILSKLDYQPVKINHLGDWGTQFGKLITAYKMWGSEAEVKADPINNLLKYYV 194

Query: 203 GVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
             + + V     D  + E    L   +E+   +   +  ++ +K  +   + L+I  D F
Sbjct: 195 RFHKEDVDHPEMDDEAREWFKKLENGDEEATHLWSWFRSES-LKAFKKIYQRLDIDFDSF 253

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++      +++++D L  +  + E       S+  +  D+ +  L          
Sbjct: 254 KGEAFYN----DKMQEVVDILEDKHLLQE-------SQGAEVVDLSKYDL---------- 292

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               + KSDG+  Y   DLA    +     F   +YV+G++ + + K+L+AV   +    
Sbjct: 293 NPALIKKSDGATLYITRDLAAAIYRKRTYDFVQSLYVVGNEQTNHFKQLKAVLTEMGFDW 352

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFI-------------------------TLRHV 413
           A     +   +         K+S R+G  I                             V
Sbjct: 353 ADQIHHIPFGLITSGGK---KLSTRSGRVILLDKVLDDAVALAHEQIEAKNPDLPNKDEV 409

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            D VG  +V F  L  +     DF+  +V     E    YVQYA+AR  SI R+A     
Sbjct: 410 ADAVGIGAVVFHDLKNERMNSFDFNLEEVVRFEGE-TGPYVQYAHARAESILRKAG---- 464

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                  P     +++  D +    +  L+E+P  +  A+   EP  +A Y   LA  ++
Sbjct: 465 ------SPEIAATEQTLSDPAAWDTLKLLSEFPATVVRASTEYEPSVIAKYAIHLAKAYN 518

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++++ +       +   + +L   RL LV +V+ ++   L ++GV++P+EM
Sbjct: 519 KYYANTK-------ILVEDDEL-NARLALVKSVSIVLKEALRLLGVKAPDEM 562


>gi|300769179|ref|ZP_07079067.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180300|ref|YP_003924428.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300493208|gb|EFK28388.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045791|gb|ADN98334.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 562

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/592 (21%), Positives = 248/592 (41%), Gaps = 80/592 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           ++ ILD+  IE+P+    G L+      L++ L   P  IA  IV ++      + V   
Sbjct: 20  QEAILDK--IEQPKTSKQGDLAF-PTFTLAKTLHKAPQMIASDIVEKVDGSD-FEKVVAM 75

Query: 85  GKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           G  ++N +    ++   IL+ ++ +G  +G   +G+  +V I+  S N   P+ +GH R 
Sbjct: 76  GP-YVNFFFKKDAFAADILNQVLSNGGHFGDAKLGEAGQVPIDMSSPNIAKPISMGHLRS 134

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP 202
            V+G++LA++++   Y+  +  ++ D G Q   L  +   W  +  +  +  +    YY 
Sbjct: 135 TVIGNSLANILSKLDYQPVKINHLGDWGTQFGKLITAYKMWGSEAEVKADPINNLLKYYV 194

Query: 203 GVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
             + + V     D  + E    L   +E+   +   +  ++ +K  +   + L+I  D F
Sbjct: 195 RFHKEDVDHPEMDDEAREWFKKLENGDEEATHLWSWFRSES-LKAFKKIYQRLDIDFDSF 253

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++      +++++D L  +  + E       S+  +  D+ +  L          
Sbjct: 254 KGEAFYN----DKMQEVVDILEDKHLLQE-------SQGAEVVDLSKYDL---------- 292

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               + KSDG+  Y   DLA    +     F   +YV+G++ + + K+L+AV   +    
Sbjct: 293 NPALIKKSDGATLYITRDLAAAIYRKRTYDFVQSLYVVGNEQTNHFKQLKAVLTEMGFDW 352

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFI-------------------------TLRHV 413
           A     +   +         K+S R+G  I                             V
Sbjct: 353 ADQIHHIPFGLITSGGK---KLSTRSGRVILLDKVLDDAVALAHEQIEAKNPDLPNKDEV 409

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            D VG  +V F  L  +     DF+  +V     E    YVQYA+AR  SI R+A     
Sbjct: 410 ADAVGIGAVVFHDLKNERMNSFDFNLEEVVRFEGE-TGPYVQYAHARAESILRKAG---- 464

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                  P     +++  D +    +  L+E+P  +  A+   EP  +A Y   LA  ++
Sbjct: 465 ------SPEIAATEQTLSDPAAWDTLKLLSEFPATVVRASTEYEPSVIAKYAIHLAKAYN 518

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++++ +       +   + +L   RL LV +V+ ++   L ++GV++P+EM
Sbjct: 519 KYYANTK-------ILVEDDEL-NARLALVKSVSIVLKEALRLLGVKAPDEM 562


>gi|227892884|ref|ZP_04010689.1| arginine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865290|gb|EEJ72711.1| arginine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 561

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/607 (21%), Positives = 248/607 (40%), Gaps = 74/607 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ +  +P  IA
Sbjct: 2   DFKNEVVDLVS---SQVDLPKEKITA-LIERPKNAKMGDYAFP-AFILAKTMHKNPAMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I A +  D    S+   G  ++N  ++   L    L +++     YG   +GKG    
Sbjct: 57  QDIAANLSSDD-FASIKAVGP-YVNFAINHEKLVSSTLKTVLTEKEHYGDQKLGKGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     VK +    +  
Sbjct: 174 GNEEDVKKDPIMNLFHYYVRFHKEAEKNPELDDEGREWFKKLEDGDPEAVKLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKDKGLLHE-------SQGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            DM             D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ 
Sbjct: 283 VDMG-----------PDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + +   L+ V   +    A                           L ++++        
Sbjct: 332 AQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKK 391

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++ ++  D      V  +VG  +V F  L     +  DF+  +V  + + +   YVQY  
Sbjct: 392 QIQEKNPDLANQDQVAHDVGVGAVVFHDLKNDRLDNFDFNLDEVV-RFEGDTGPYVQYTN 450

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+FR+A  +           +        D     +   LA++PR+I  +    EP
Sbjct: 451 ARAQSVFRKAAAMGEKPSEKDLVLD--------DDWAFAVAKDLADFPRIIARSADKFEP 502

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++G
Sbjct: 503 SVIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVEATSIVLTESLRLLG 554

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 555 VNAPKEM 561


>gi|239980243|ref|ZP_04702767.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452098|ref|ZP_06591488.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355047|gb|EFE81949.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 599

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/584 (21%), Positives = 218/584 (37%), Gaps = 56/584 (9%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++ L  +P  +A  +V  I  D  +  + ++G GF+NL LS + 
Sbjct: 34  RRSDRADYQANGILALAKKLKGNPRELATKVVDAIGADEVIQDIEVSGPGFLNLTLSDAA 93

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++        G  L        I++   N    MHVGH R AV+GD +  ++ F+
Sbjct: 94  ITRNLAARAADPARLGVPLAEAPGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRMLEFT 153

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-ELADK 216
           G +V R ++I D G Q   L   +     +     +S   E     V         L   
Sbjct: 154 GEQVVRRHHIGDWGTQFGMLIQYLIEHPGELAATAESAAVEAGQASVEAGEQAMSSLNRL 213

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRD 275
           Y +    F  ++         V  +     + L       D   +            I D
Sbjct: 214 YKASRALFDSDEEFKTRARRRVVDLQAGDPETLAMWQRFVDESKVYFYSVFNKLDMEIHD 273

Query: 276 IIDNLARQGY-VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSY 331
             D +   GY            ++      +    +F   + G D   V   + KSDG +
Sbjct: 274 A-DVVGESGYNAMLAETCRLLEESGVAVRSEGALCVFFDDVKGPDGQPVPLIVQKSDGGF 332

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELV 389
            Y A DL+  + + ++   D ++YV+ +  S + K +   A         +  V L    
Sbjct: 333 GYAATDLSAIRDRVFQLKADTLLYVVDARQSLHFKMVFETARRAGWLGEDVKAVQLAFGT 392

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVD-----------------------------EVGSD 420
            L +DG P K   R G+ + L  ++D                             EVG  
Sbjct: 393 VLGKDGKPFK--TREGETVRLVDLLDEAVERATAVVREKDVKEQLTEEQIAERGAEVGIG 450

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L    +    FD  ++   + +  V Y+QYAYAR RSI R+A +  P       
Sbjct: 451 AVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRRAGEARP------- 502

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              V   E     +E  L +HL ++  +  +A     P+KLA YLY  AS++   +    
Sbjct: 503 ---VAHPELALAPAERALGLHLDQFGEIASDAAAEYAPHKLAAYLYQTASLYTTFYDQCH 559

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                     N  +L   RL L       ++ G+ ++G+ +P +
Sbjct: 560 VLSA-----DNPPELVENRLFLCDLTGRTLHQGMELLGIRTPEQ 598


>gi|328464593|gb|EGF35958.1| arginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 551

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/594 (21%), Positives = 239/594 (40%), Gaps = 69/594 (11%)

Query: 18  IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77
           +  K+  +KK +   +IERP++   G  +   A IL++ L  +P  IA+ I   +  D +
Sbjct: 1   MLAKLIYQKKKIAA-LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-N 57

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
             S+   G  ++N  +    L       ++S  E+  +       + I+  S N   PM 
Sbjct: 58  FASIKAVGP-YVNFAIDHEKLVSSTLKDILSEKEHYGDQKFGEGNIPIDMSSPNIAKPMS 116

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196
           +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W  ++ +  +    
Sbjct: 117 MGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHWGNEEDVKKDPIMN 176

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKALNI 254
              YY   + +       D    E     E+     VK +    +  ++  +   K L +
Sbjct: 177 LFHYYVRFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGV 236

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+      ++ +ID L  +G ++E       S+  Q  DM          
Sbjct: 237 TFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMG--------- 276

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
              D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ + +   L+ V   
Sbjct: 277 --PDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKK 334

Query: 374 VSEKKAQINVL----------------------LCELVRLYRDGMPIKMSKRAGDFITLR 411
           +    +                           L ++++        ++ ++  D     
Sbjct: 335 MGYDWSDEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAISLAKKQIEEKNPDLADKD 394

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  AR +S+ R+A  +
Sbjct: 395 QVAHDVGVGAVIFHDLKNDRLDNFDFDLDEVV-RFEGDTGPYVQYTNARAQSVLRKAAAM 453

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                   F  +        D     +   LA++PR+I  +    EP  +A +  DLA  
Sbjct: 454 GEKPSEGDFALD--------DDWAFAVAKDLADFPRIIARSADKFEPSVIAKFALDLAKK 505

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+ ++++ +       +   + K+   RL LV A + ++   L ++GV +P EM
Sbjct: 506 FNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTEALRLLGVNAPKEM 551


>gi|229085154|ref|ZP_04217401.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228698135|gb|EEL50873.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 562

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/587 (22%), Positives = 228/587 (38%), Gaps = 85/587 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IE P+    G  +    M L++     P  IA+ +   +  D     V   G  ++N++
Sbjct: 27  LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEVAENLN-DSFFTKVEAVGP-YVNVF 83

Query: 93  LSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +   +   +  + +    EYG+   G+   V I++ S N   P  +GH R  ++G++L 
Sbjct: 84  FNRHIVSDDVLKMILAEKEEYGQGHFGQEKTVVIDYSSPNIAKPFSMGHLRSTMIGNSLK 143

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    GYEV    YI D G Q   L  +         + N+  + E     ++  +V  
Sbjct: 144 HIAEKCGYEVVGINYIGDWGTQFGKLITAY------KKWGNEELVKEDPIRELFKLYVHF 197

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIR-DDLKALNIQHDIFISEDDFHRG 268
               K + EL       W   ++D   +A  +    R + LK  +  +++   E    +G
Sbjct: 198 HEEVKENPELEEEG-RAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLGVEFTNFQG 256

Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +      + D ++ L  +G + E                D  Q++    +  +D+   L+
Sbjct: 257 EAFYNDKMDDFVEILEEKGLLEES---------------DGAQVV---NLEKEDMPPCLI 298

Query: 326 -KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            KSDG+  Y   DL     +     FD  +YV+G++ S +  +   V   +        +
Sbjct: 299 KKSDGATLYATRDLTAALYRQNTYEFDKALYVVGAEQSLHFTQFFTVLKKLGYNWVD-GM 357

Query: 384 LLCELVRLYRDGMPIKMSKRAG-------------------------DFITLRHVVDEVG 418
                  + +DG   KMS R G                         D      V  +VG
Sbjct: 358 AHVPFGLILKDGK--KMSTRKGKVVLLEEVLEEAIMLAKQNIEEKNPDLKQKEEVAKQVG 415

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V F  L  +    ++F   K+ +   E    YVQY +AR  SI R+    F    F 
Sbjct: 416 VGAVIFHDLKNERMHNIEFSLEKMLKFEGE-TGPYVQYTHARACSILRKENVEFETESFA 474

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L            D      I  L  +P+VIE A    EP  +A YL D+A  F+ ++ +
Sbjct: 475 LN-----------DDHSWSTIKLLNRFPKVIETAFSKNEPSHIAKYLLDVAQAFNKYYGN 523

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       +  NN +    RL LV+AV  ++  GL ++G+ +P EM
Sbjct: 524 VR-------ILENNEE-KESRLALVYAVIVVLKEGLRLLGMGAPEEM 562


>gi|325684309|gb|EGD26480.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 565

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/608 (21%), Positives = 237/608 (38%), Gaps = 76/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L+ +     ++      + IERP+D   G  +      L++ +   P  IA  
Sbjct: 4   KQLVAEALQAVLTDWSLDD---IDVKIERPKDEKLGDYAFP-TFTLAKTMRKAPNLIAAE 59

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + V   G  +IN +L  S     IL  I+     YG   +G G  V+ E
Sbjct: 60  LAEKIDQ-GSFEKVEAVGP-YINFFLDKSQTGAAILREILADPENYGARDLGHGRNVSTE 117

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRY 185
           + S N   PM +GH R  ++G+ +A ++A  G++  R  Y+ D G Q    +A    W  
Sbjct: 118 YSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGN 177

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMK 243
              +  +  +    YY  +  +       D+   E  +  E  ++    +  +  +  ++
Sbjct: 178 DADIEKDPINTLLSYYVRINREAEEHPEYDEEGREWFSKLEHGDEEAKRLWSWFREVSLE 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L++  D F  E          + + I  L  +G +        KS+  +  D
Sbjct: 238 RFKKVYNMLDVHFDSFTGEAF----SAQMMDEPIQILREKGLL-------VKSQGAEIVD 286

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +++  L              ++KS+G+ TY   DLA    + +   F   IYV+G +   
Sbjct: 287 LEKYNL----------PPLMVIKSNGTSTYITRDLATAMYRKKTYDFYKSIYVVGQEQEV 336

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           Y ++L A    +    A   V +   +         KMS R G+ + L  V++E      
Sbjct: 337 YFQQLRACLKEMGFDWADDIVHISFGLMSING---QKMSTRKGNVVNLEDVLNESVDLAR 393

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       +DF+  +V +   E    YVQY+
Sbjct: 394 KQISEKNVGLKNADEVAKQVGIGAVVFHDLKNYRRNPVDFNLEEVVKFEGE-TGPYVQYS 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR   + R++       DF       I  E      E  L+  +  Y   I+ A    +
Sbjct: 453 RARGERLLRKSGIT----DFSDADLTKIGAE------EWDLVSFMGRYADTIQKAMETYD 502

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y  +LA  F+ +++H R       V   +  +   RL +V AV+ +I S L+++
Sbjct: 503 PSAIAKYALELAKRFNKYYAHTRIL-----VDDVDEDVKKARLAVVQAVSHVIKSALDLL 557

Query: 578 GVESPNEM 585
            V++P+EM
Sbjct: 558 DVKAPDEM 565


>gi|323466019|gb|ADX69706.1| Arginyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 568

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/606 (21%), Positives = 243/606 (40%), Gaps = 72/606 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 9   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I   +  D +  S+   G  ++N  +    L       V+S  E+  +       + I
Sbjct: 64  QDIAENLSSD-NFASIKAVGP-YVNFAIDHEKLVSSTLKDVLSEKEHYGDQKFGEGNIPI 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W 
Sbjct: 122 DMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHWG 181

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMM 242
            ++ +  +       YY   + +       D    E     E+     VK +    +  +
Sbjct: 182 NEEDVKKDPIMNLFHYYVRFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSL 241

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q  
Sbjct: 242 EDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVV 290

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS 361
           DM             D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ +
Sbjct: 291 DMG-----------PDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQA 339

Query: 362 GYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIK 399
            +   L+ V   +    +                           L ++++        +
Sbjct: 340 QHFVELKTVLKKMGYDWSDEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKKQ 399

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + ++  D      V  +VG  +V F  L     +  DF   +V  + + +   YVQY  A
Sbjct: 400 IEEKNPDLADKDQVAHDVGVGAVIFHDLKNDRLDNFDFALDEVV-RFEGDTGPYVQYTNA 458

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R +S+ R+A  +        F  +        D     +   LA++PR+I  +    EP 
Sbjct: 459 RAQSVLRKAAAMGEKPSEGDFALD--------DDWAFAVAKDLADFPRIIARSADKFEPS 510

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++GV
Sbjct: 511 VIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTEALRLLGV 562

Query: 580 ESPNEM 585
            +P EM
Sbjct: 563 NAPKEM 568


>gi|299471588|emb|CBN79450.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 616

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 117/608 (19%), Positives = 217/608 (35%), Gaps = 77/608 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              + + ++E       EK    R ++        G    NAAM L++PL   P  +A  
Sbjct: 28  RDTIVDAVREALVDAFGEKFRDSRPLVTSATKPEFGDYQCNAAMALAKPLKCKPRDVASS 87

Query: 68  IVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           +  ++  ++    ++  IAG GFINL L   ++   + S+V  G   G   +    +V +
Sbjct: 88  LAEKLGPRLSAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGERLGVPRVTNPERVVV 147

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++GDT+  ++ F G++V R  ++ D G Q   L   +    
Sbjct: 148 DFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHDVVRLNHVGDWGTQFGMLISHLKEVA 207

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +A+ +   D           K    +L   Y      F E+     +    V  +    
Sbjct: 208 PEAIEDGAED-----------KFNVGDLVTFYKEAKARFDEDDGFKEIARAEVVKLQAGD 256

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----K 301
            +  +A  +     + E    RG       +   L  +G  +  ++ P      +     
Sbjct: 257 AESKRAWGV-----LCEAS-RRGFQDIYSLLGVELEERGESFYNVMLPDVVSDLESEGLL 310

Query: 302 CDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMG 357
            + D  ++++     +  G      + KSDG + Y   DLA  + +      D ++YV+ 
Sbjct: 311 EESDGAKVVYLEGFESRDGTSQPLLVKKSDGGFMYSTTDLAAIRHRVTTERADRVLYVVD 370

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
                +  ++  VA         + +       L +     K   RAG+ + L  ++ E 
Sbjct: 371 VGQGSHFAQVFQVARRAGFAPEGVQLQHVPFG-LVQGEDGKKFKTRAGETVKLSDLLMEA 429

Query: 417 ---------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
                                            VG  +V++  L         F + K+ 
Sbjct: 430 VRIAGESIRKRREEEGGEGYQADEVELERVSKVVGIGAVKYADLSMNRESNYRFSYAKML 489

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+ YA+AR + I ++A +   DL                   E  L   L 
Sbjct: 490 SL-QGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEISMGT--------PEEAALARMLL 540

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P V+E+  +   P++L  Y+++L+S F+  + +   N           +    R    
Sbjct: 541 RLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNT------GETEEFKGSRTAFC 594

Query: 564 HAVASIIN 571
              A +I 
Sbjct: 595 SGTADVIE 602


>gi|256852165|ref|ZP_05557551.1| arginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661802|ref|ZP_05862713.1| arginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282933663|ref|ZP_06339022.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205670|ref|ZP_06923066.1| arginine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615211|gb|EEU20402.1| arginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547549|gb|EEX23528.1| arginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281302196|gb|EFA94439.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297150248|gb|EFH30545.1| arginine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 558

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 250/613 (40%), Gaps = 89/613 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++   +     ++++ K+ ++  +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKQKVVELIS---SQVELPKEKINS-LIERPKNPEMGDYAFP-AFILAKTLHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + IVA +  D + + +   G  ++N  +  S L       V+       N       V I
Sbjct: 57  KAIVANL-SDDNFEKIQAVGP-YVNFSIKKSALISQTLEEVLVKKNNYGNQNLGSGNVAI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +  S N   PM +GH R  V+G+++A ++   GY   +  ++ D G Q   L  +     
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILTKVGYTPIKINHLGDYGTQFGKLITAY---- 170

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMM 242
              L+ N+ D+ +     ++  +V      +   EL +     W   ++     +V+   
Sbjct: 171 --KLWGNEEDVKKDPINSLFHYYVKFHEVAEEKPELEDEG-RAWFKKLEGGDSEAVKLWN 227

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +  L+  N  +     E D + G+      +  I+D L ++  + E       S+  
Sbjct: 228 WFRKVSLQEFNRIYKKLNVEFDSYHGEAFYNDKMDAIVDELRQKDLLVE-------SRGA 280

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMG 357
           Q  D+            G D +   +LKSDG+  Y   DL A    K    F   +YV+G
Sbjct: 281 QVVDL------------GPDKNPAMILKSDGTSIYTTRDLTAAEYRKKHYDFVQALYVVG 328

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ S Y ++L+ V   +  + A  ++       + + G   K+S R G+ +         
Sbjct: 329 NEQSAYFEQLKEVLKKMGHEWAD-DIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLEDA 385

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V +EVG  +V F  L     +  DF+  +V     E    
Sbjct: 386 VELAMKQIETKNPSLPNKEQVANEVGIGAVVFHDLKNDRLDAFDFNLEEVVRFEGE-TGP 444

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY  AR +SI R+A  I    + DL            D     +   LA++P V+  A
Sbjct: 445 YVQYTNARAQSILRKANQIVTIDELDLS-----------DEWAFAVAKDLADFPAVLAKA 493

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +   LA  F+ ++++ R       +   + +L   RL LV A + ++  
Sbjct: 494 SEKYEPSIIAKFALKLAKHFNKYYANVR-------ILDEDDQL-AARLALVKATSIVLTE 545

Query: 573 GLNIIGVESPNEM 585
            L+++GV +P EM
Sbjct: 546 SLHLLGVAAPKEM 558


>gi|323349209|gb|EGA83439.1| YDR341C-like protein [Saccharomyces cerevisiae Lalvin QA23]
          Length = 607

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/624 (22%), Positives = 242/624 (38%), Gaps = 90/624 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI      L    +E       G L      +  R  G +P  +A
Sbjct: 30  NIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRL--RIKGANPKDLA 87

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
                +      ++ V   G  FI  + +P +L K ++  I+    +YG   + +  KV 
Sbjct: 88  VQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVI 146

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  LA+L    G+EV R  Y+ D G Q   LA+    +
Sbjct: 147 IEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERY 206

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEK 228
             ++AL  +    P  +   VY+   K + +E             A +Y   + +  EE 
Sbjct: 207 GNEEALVKD----PIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEA 262

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I D    LNI++D++  E    +     +   ID    +G  +E
Sbjct: 263 -LKIWKRFREFSIEKYI-DTYARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE 317

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER 347
                           D+  +L   T     + + ++ KSDG+  Y   D+     +YE+
Sbjct: 318 ----------------DKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEK 361

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCEL 388
             FD MIYV+ S    +  +   +   +  + A+                    V L  +
Sbjct: 362 YHFDKMIYVIASQQDLHAAQFFEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTVVFLDNI 421

Query: 389 VRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +   ++ M   M K    +        V D VG  +V    +  K     +F + ++   
Sbjct: 422 LEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSF 481

Query: 446 SKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            + +   Y+QYA++R RS+ R A    +  + + DF L            + +   LI  
Sbjct: 482 -EGDTGPYLQYAHSRLRSVERNASGITQXKWINADFSLLK----------EPAAKLLIRL 530

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L +YP V+ NA    EP  +  YL+ L       +        + +V     +L   RL 
Sbjct: 531 LGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLA 583

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  A   ++ +G+ ++G+     M
Sbjct: 584 LYGAARQVLYNGMRLLGLTPVERM 607


>gi|46445865|ref|YP_007230.1| arginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627687|sp|Q6MEP4|SYR_PARUW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46399506|emb|CAF22955.1| probable arginyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 584

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/623 (21%), Positives = 236/623 (37%), Gaps = 77/623 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57
           M       S L N  ++       +  +LD   +  I        GH   N+AM L++ L
Sbjct: 1   MNT---LLSVLANLFQQATANAFPDLSVLDPNFQPEITPSTQEKFGHYQFNSAMKLAKLL 57

Query: 58  GLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             +P  +AE IV ++    P +  + IAG GFIN+  S  +L K L  I++    +G   
Sbjct: 58  KKNPRQVAEAIVNQLTDSLPPLSKIEIAGPGFINMTFSTDFLSKNL-DILLRDAHFGIPF 116

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             K  K+ I+F S N    MHVGH R  V+GD+LA L  F G+ V R  ++ D G     
Sbjct: 117 PEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDWGTAFGM 176

Query: 177 LALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           L   +       L        + L   Y           E   +   E++   + +    
Sbjct: 177 LIAYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQGEQKA- 235

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
               + Q + +I +   + +    D+ I +      +P  + +I+ +L ++G V      
Sbjct: 236 --REAWQMICEISQKAYQEIYQLLDVKIIDRGESFYNP-FLPNIVSDLEKKGLV------ 286

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
              S   +   ++  Q        G+++   + KSDG Y Y   D+A    + Y    D 
Sbjct: 287 -KISDGAKCIFLEGFQ-----NREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDR 340

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINV-LLCELVRLYRDGMPIKMSKRAGDFIT 409
           +IY+  +  + + + +   A         QI V  +   + L  DG   K   R+G+   
Sbjct: 341 LIYITDAGQATHFQMIFKAAEKAKYLDTTQIRVDHVPFGLVLGTDGK--KFRTRSGETEK 398

Query: 410 ---------------------------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
                                       RH+   +G  ++++  L         F + ++
Sbjct: 399 LIDLLRTAINCADKILSEKNPEMEESERRHLAKSLGIGAIKYADLSCNRVGDYTFSYDRM 458

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
             + + N   ++ YAY R   I R+ K   P +  +          +   ++E++L +H+
Sbjct: 459 L-RFEGNTAAFLMYAYVRIAGIKRRLKANLPAVLEN-------THINLEHSTEIELGLHI 510

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +   +        P +L  YLY LA  F+  +   R                  RL L
Sbjct: 511 LRFHETLNLMANDLLPNRLTDYLYTLAEKFNAFFRDCR---------VEGTPQQNTRLLL 561

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A A ++  GL I+G+ + ++M
Sbjct: 562 CEATAKVLKQGLTILGLTTVDKM 584


>gi|296502777|ref|YP_003664477.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296323829|gb|ADH06757.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 562

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 134/613 (21%), Positives = 232/613 (37%), Gaps = 85/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLYNIFTDELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLGEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYRKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
             + +   D   P      +Y++   +       +E L      W   ++   + +V+  
Sbjct: 177 GNEEVVKED---PIRELFKLYVQFHAEVKE----NEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298
                + LK  +  +++   E    +G+      + D I  L     + E          
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEAFYNDKMEDFIRILEEHDLLEES--------- 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
                     L+      G      + KSDG+  Y   DL     +    GFD  +YV+G
Sbjct: 281 -------EGALVVNLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            + S +  +   V   +        +       + +DG   KMS R G  I L  V++E 
Sbjct: 333 PEQSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEA 389

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V F  L  +    ++F    + +   E    
Sbjct: 390 IELAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGP 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY +AR  SI R+    F    F L            D     ++  L ++P++IE A
Sbjct: 449 YVQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAA 497

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  ++ Y+ D+A  F+ ++ + R             K    R+ LV+AV  ++  
Sbjct: 498 FNKNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRIALVYAVTVVLKE 549

Query: 573 GLNIIGVESPNEM 585
           GL ++GVE+P EM
Sbjct: 550 GLRLLGVEAPEEM 562


>gi|222143238|pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase
           From Campylobacter Jejuni
          Length = 464

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 148/493 (30%), Positives = 257/493 (52%), Gaps = 41/493 (8%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R AV GDTL  
Sbjct: 3   LSKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGAVFGDTLTR 61

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE YY G Y+  + KE
Sbjct: 62  LARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGEYIVDLAKE 121

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +K+  E  +   E+ +P + D++   M+ +I+ +L+   I+ D ++SE  ++      
Sbjct: 122 AFEKFGKEFFS---EENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERSYY----DA 174

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +++L     +YE                   ++   S+  GD+ DR +++ DG  T
Sbjct: 175 LNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVIIREDGRGT 218

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++L ++V L 
Sbjct: 219 YLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLL 278

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   ++++   NPV+
Sbjct: 279 KDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQKEDSSNPVY 338

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA+AR   +F +A     D+                +   + L+        V+ +A
Sbjct: 339 YINYAHARIHQVFAKAGKKIDDVMKADLQS--------LNQDGVNLLFEALNLKAVLNDA 390

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             A+   K+  YL +LA+ FH  ++  +         AN   L    L+L   VA  I +
Sbjct: 391 FEARALQKIPDYLKNLAANFHKFYNENKV-----VGSANENDL----LKLFSLVALSIKT 441

Query: 573 GLNIIGVESPNEM 585
             +++G+E+ N+M
Sbjct: 442 AFSLMGIEAKNKM 454


>gi|315038946|ref|YP_004032514.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325957356|ref|YP_004292768.1| arginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312277079|gb|ADQ59719.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325333921|gb|ADZ07829.1| arginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184081|gb|AEA32528.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 561

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/607 (21%), Positives = 244/607 (40%), Gaps = 74/607 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ +  +P  IA
Sbjct: 2   DFKNEVVDLVS---SQVDLPKEKIAA-LIERPKNAKMGDYAFP-AFILAKTMHKNPAIIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +  D    S+   G  ++N  +    L    L  ++     YG   +G+G    
Sbjct: 57  KDIAENLSSDD-FASIQAVGP-YVNFAIDHEKLVSSTLKDVLAEKEHYGDQKLGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     V+ +    +  
Sbjct: 174 GNEEDVKKDPIMSLFHYYVRFHKEAEDNPELDDEGREWFKKLEDGDPEAVRLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +     L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYNELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SQGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            DM             D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ 
Sbjct: 283 VDMG-----------PDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + +   L+ V   +    A                           L ++++        
Sbjct: 332 AQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKK 391

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++ ++  D      V  +VG  +V F  L     +  DF+  +V  + + +   YVQY  
Sbjct: 392 QIQEKNPDLANQDQVAHDVGVGAVVFHDLKNDRLDNFDFNLEEVV-RFEGDTGPYVQYTN 450

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A  +           N        D     +   LA++PR++  A+   EP
Sbjct: 451 ARAQSVLRKAAAMGEKPSDTDLALN--------DDWAFAVAKDLADFPRIVARASEKFEP 502

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++G
Sbjct: 503 SVIAKYSLDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTESLRLLG 554

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 555 VNAPKEM 561


>gi|71282384|ref|YP_267854.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|109894983|sp|Q487B1|SYR_COLP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71148124|gb|AAZ28597.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 582

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 126/623 (20%), Positives = 233/623 (37%), Gaps = 79/623 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   +        + +     I +        G    N  M  ++ L  +
Sbjct: 1   MNI----KNILSERVSAAMVAAGLPEGTNPAISL--SNRPQFGDYQANGVMGAAKKLKTN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG----IEYGRNL 116
           P  +A  +VA + +D     + +AG GFIN++L  S+L   L+ +         + G   
Sbjct: 55  PRELATKVVAELDLDGIASKIELAGPGFINIHLDESWLAAQLNEVAQDDFIGVAQRGTTP 114

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +   V +++ + N    MHVGH R  ++GD +   + F G +V R+ ++ D G Q   
Sbjct: 115 GDESQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRALEFRGDKVIRQNHMGDWGTQFGM 174

Query: 177 LALSV--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +       +      +DL E +Y    ++   +E           F +     +VK
Sbjct: 175 LIAHLSDKLASDEVAETALADL-ENFYREAKVRFDNEE----------GFADRARADVVK 223

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             S       +      ++I H    SE+ + + + S  R  I   +        ++   
Sbjct: 224 LQSGDEACAKLWQQFIDISITH----SEEIYAKLNVSLKRSDIMGESAYNDDLSTVVDEL 279

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL-AYFKCKYERGFD 350
            +K   + +    +++F + M   D + P   + KS G + Y   DL A      +   +
Sbjct: 280 MAKKIAE-ESQGAKVVFINEMANKDGEAPVFIVQKSGGGFLYATTDLSACRYRSGKLAAN 338

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFIT 409
            +I    +  + + K++E VA         +    C   + +  DG P K   R G  I 
Sbjct: 339 RIIIFTDARQALHFKQVEIVARKAGLLPENVGYQHCPFGMMMGDDGKPFK--TRTGGTIK 396

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  ++DE                           VG  +V+F  L +  +    FD+  +
Sbjct: 397 LAELLDESIVRAAALIKEKNPDITDTDLTEISKKVGIGAVKFADLSKNRTSDYIFDWKTM 456

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               +     Y+QYAY+R +SIF +A  +  D   ++          +    E       
Sbjct: 457 LSF-EGATAPYLQYAYSRIQSIFSKAGTVKNDAVINIIEPQEKALALKLLQLE------- 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                V++       P  L  YLY+LAS++   +      P L+   +   ++   RL L
Sbjct: 509 ----DVVDAVISECTPNLLCNYLYELASLYMSFYEAC---PILKEGISG--EVKASRLAL 559

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
            + VA  +  GL+I+G+E+   M
Sbjct: 560 CNVVADTLKQGLDILGIETMERM 582


>gi|259145577|emb|CAY78841.1| EC1118_1D0_6315p [Saccharomyces cerevisiae EC1118]
          Length = 607

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/631 (22%), Positives = 246/631 (38%), Gaps = 104/631 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI      L    +E       G L      +  R  G +P  +A
Sbjct: 30  NIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRL--RIKGANPKDLA 87

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
                +      ++ V   G  FI  + +P +L K ++  I+    +YG   + +  KV 
Sbjct: 88  VQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVI 146

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  LA+L    G+EV R  Y+ D G Q   LA+    +
Sbjct: 147 IEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERY 206

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEK 228
             ++AL  +    P  +   VY+   K + +E             A +Y   + +  EE 
Sbjct: 207 GNEEALVKD----PIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEA 262

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I D    LNI++D++  E    +     +   ID    +G  +E
Sbjct: 263 -LKIWKRFREFSIEKYI-DTYARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE 317

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER 347
                           D+  +L   T     + + ++ KSDG+  Y   D+     +YE+
Sbjct: 318 ----------------DKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEK 361

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV+ S    +  +   +   +  + A+        ++    GM   MS R G 
Sbjct: 362 YHFDKMIYVIASQQDLHAAQFFEILKQMGFEWAK-------DLQHVNFGMVQGMSTRKGT 414

Query: 407 FITLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFD 438
            + L ++++E                            VG  +V    +  K     +F 
Sbjct: 415 VVFLDNILEETKEKMHEVMKRNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFK 474

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTS 494
           + ++    + +   Y+QYA++R RS+ R A    +D + + DF L            + +
Sbjct: 475 WERMLSF-EGDTGPYLQYAHSRLRSVERNASGITQDKWINADFSLLK----------EPA 523

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              LI  L +YP V+ NA    EP  +  YL+ L       +        + +V     +
Sbjct: 524 AKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTEE 576

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   RL L  A   ++ +G+ ++G+     M
Sbjct: 577 LATARLALYGAARQVLYNGMRLLGLTPVERM 607


>gi|303239264|ref|ZP_07325793.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593309|gb|EFL63028.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 565

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 115/606 (18%), Positives = 240/606 (39%), Gaps = 78/606 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           +  +  I   + ++K  ++R +IE P +   G  S      LS+ L   P  IA  +  +
Sbjct: 6   EEVINAILNHVNLDKNEIER-LIEIPPNDDMGDYSF-PCFQLSKTLRKAPHIIAGELADK 63

Query: 72  IKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           I     ++ + + G G++N Y    ++   +L  I   G  +G + +GKG  + +++ + 
Sbjct: 64  ITKPECIEKICVIG-GYLNFYAEKVNFTTIVLKKIQEQGENFGSSDVGKGKNIVLDYCAT 122

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N   P H+GH    V+G++L  +  F GY      ++ D G Q   L ++       A  
Sbjct: 123 NIAKPFHIGHLPTTVIGNSLYKIFKFLGYNCVGINHLGDWGTQFGKLIVAYKKWGNNA-- 180

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSE-------LLNFPEEKWLPIVKDYSVQAMMK 243
                 P      +Y+K   +   DK   +        +   +++++ + K +   ++  
Sbjct: 181 -EIEKNPIKELVKIYVKFHKEAKIDKSLDDEGRAAFKAIEDGKDEYVKLWKWFRDISI-S 238

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +  L  L I  D +  E  F+      +  +I+ L  +G + E       S+     D
Sbjct: 239 EFKRILGVLKIDFDSWNGESFFN----DKMEPVINELKEKGLLQE-------SQGAHIVD 287

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +    +              +L+SDG+  Y   DLA    + E   F  ++Y + +  + 
Sbjct: 288 LSEFNM----------PPCIILRSDGATLYATRDLAAIFYRKETYDFHKILYCVATQQNL 337

Query: 363 YVKRLEAVAAAVSEKKAQ----------------------INVLLCELVRLYRDGMPIKM 400
           + ++L  V   +    A+                        V L +++          +
Sbjct: 338 HFQQLFKVIEKMGYPWAENLVHVANGMISLESSSMGTRQGTAVFLDDVLSEAVSKALAII 397

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
            ++  +      V   VG  +++F  L  K  +   F + KV     E    Y+QY YAR
Sbjct: 398 EEKNPELEGKEEVSRMVGIGAIKFSALKNKRIKDSVFAWEKVLNFEGETSC-YIQYTYAR 456

Query: 461 CRSIFRQAKDIFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             S+ ++ ++     +++ L            +     ++  LA++P ++E+A+   EP 
Sbjct: 457 ICSVIKKVENSEDLGINYSLLA----------EGDSYDVVKLLAKFPDIVESASNEYEPS 506

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            ++ YL DL   ++  +           + ++  +L   R+ L  AV  ++ +G++++G+
Sbjct: 507 IISKYLIDLVQSYNKFYHFN-------PILSSEDELKYSRIALCKAVKIVVKNGMSLLGI 559

Query: 580 ESPNEM 585
           E P  M
Sbjct: 560 ECPERM 565


>gi|227876933|ref|ZP_03995029.1| arginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850176|ref|ZP_05555606.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|293379845|ref|ZP_06625967.1| arginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|295693485|ref|YP_003602095.1| arginyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|227863490|gb|EEJ70913.1| arginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256713148|gb|EEU28139.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|290923617|gb|EFE00498.1| arginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|295031591|emb|CBL51070.1| Arginyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 561

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/607 (21%), Positives = 245/607 (40%), Gaps = 74/607 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAFP-AFILAKTLHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +  D +  ++   G  ++N  +    L    L  ++     YG   IG+G    
Sbjct: 57  KNIADNLSSD-NFANIQAVGP-YVNFAIDHEKLVSSTLKDVLTEKEHYGDQKIGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     VK +    +  
Sbjct: 174 GNEEDVKKDPIMNLFHYYVKFHQEAEKNPELDNEGREWFKKLEDGDPEAVKLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            DM              +    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ 
Sbjct: 283 VDMGEG-----------ENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + +   L+ V   +    A                           L ++++        
Sbjct: 332 AQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKK 391

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++ ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  
Sbjct: 392 QIQEKNPDLADQDQVAHDVGVGAVVFHDLKNDRLDNFDFDLEEVV-RFEGDTGPYVQYTN 450

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A  +  +        +        D     +   LA++PR++  +    EP
Sbjct: 451 ARAQSVLRKAAAMGENPSETDLALD--------DDWAFAVAKDLADFPRIVARSAEKFEP 502

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++G
Sbjct: 503 SVIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTESLRLLG 554

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 555 VNAPKEM 561


>gi|237794368|ref|YP_002861920.1| arginyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511639|sp|C3KSZ0|SYR_CLOB6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229261831|gb|ACQ52864.1| arginine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 563

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 121/610 (19%), Positives = 238/610 (39%), Gaps = 78/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  S + R
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLI-SAYRR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +          + E     V      ++  +      LNF   K L    +   +   + 
Sbjct: 174 WVDEEALEKDAIGELLRIYVKFHEEAEKDPELEKEARLNF---KRLEEGSEEETELWNRF 230

Query: 245 IRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               LK  N  +D+   + D   G+      +  ++  +  +G + +       S   + 
Sbjct: 231 KDLSLKEFNKVYDMLGIKFDSLAGESFYSDKMDAVVQEIDDKGLLVD-------SNGAKV 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             +D   +              + KSDG+  Y   DLA    + +   F   IYV+G+  
Sbjct: 284 VMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYVVGTPQ 333

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + K++      +    A     +   +    +    K+S R GD + L  ++++    
Sbjct: 334 ALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLNQSVEE 390

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +G  +V F  L       + FD+ ++     E    YV+
Sbjct: 391 TLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-TGPYVE 449

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y+YAR +SI R+A ++  + D+                 E +L   L  +   I NA   
Sbjct: 450 YSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIMNAIDK 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I + LN
Sbjct: 500 LEPAIVTRYVIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVIKNALN 553

Query: 576 IIGVESPNEM 585
           ++G++   EM
Sbjct: 554 LLGIDVVEEM 563


>gi|238855154|ref|ZP_04645476.1| arginine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665531|ref|ZP_05866377.1| arginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932567|ref|ZP_06337989.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313473147|ref|ZP_07813631.1| arginine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832235|gb|EEQ24550.1| arginine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239528608|gb|EEQ67609.1| arginine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260560652|gb|EEX26630.1| arginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303315|gb|EFA95495.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 558

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 249/613 (40%), Gaps = 89/613 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++   +     ++++ K+ ++  +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKQKVVELIS---SQVELPKEKINS-LIERPKNPEMGDYAFP-AFILAKTLHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + IVA +  D + + +   G  ++N  +  S L       V+       N       V I
Sbjct: 57  KDIVANL-ADDNFEKIQAVGP-YVNFSIKKSALISQTLEEVLVKKNNYGNQNLGSGNVAI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +  S N   PM +GH R  V+G+++A ++   GY   +  ++ D G Q   L  +     
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILTKVGYTPIKINHLGDYGTQFGKLITAY---- 170

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMM 242
              L+ N+ D+ +     ++  +V      +   EL +     W   ++     +V+   
Sbjct: 171 --KLWGNEEDVKKDPINSLFHYYVKFHEVAEEKPELEDEG-RAWFKKLEGGDPEAVKLWN 227

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +  L+  N  +     E D + G+      +  I+D L ++  + E       S+  
Sbjct: 228 WFRKVSLQEFNRIYKKLNVEFDSYHGEAFYNDKMDVIVDELRQKDLLVE-------SRGA 280

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMG 357
           Q  D+            G D +   +LKSDG+  Y   DL A    K    F   +YV+G
Sbjct: 281 QVVDL------------GPDKNPAMILKSDGTSIYTTRDLTAAEYRKKHYDFVQALYVVG 328

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           ++ S Y ++L+ V   +    A  ++       + + G   K+S R G+ +         
Sbjct: 329 NEQSAYFEQLKEVLKKMGHNWAD-DIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLEDA 385

Query: 409 ----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                               V +EVG  +V F  L     +  DF+  +V     E    
Sbjct: 386 VELAMKQIETKNPGLPNKEQVANEVGIGAVVFHDLKNDRLDAFDFNLEEVVRFEGE-TGP 444

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQY  AR +SI R+A  I    + DL            D     +   LA++P V+  A
Sbjct: 445 YVQYTNARAQSILRKANQIVTIDELDLS-----------DEWAFAVAKDLADFPAVLAKA 493

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   EP  +A +   LA  F+ ++++ R       +   + +L   RL LV A + ++  
Sbjct: 494 SEKYEPSIIAKFALKLAKHFNKYYANVR-------ILDEDDQL-AARLALVKATSIVLTE 545

Query: 573 GLNIIGVESPNEM 585
            L+++GV +P EM
Sbjct: 546 SLHLLGVAAPKEM 558


>gi|256843725|ref|ZP_05549213.1| arginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256615145|gb|EEU20346.1| arginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 561

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/607 (21%), Positives = 244/607 (40%), Gaps = 74/607 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAFP-AFILAKTLHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +  D    ++   G  ++N  +    L    L  ++     YG   IG+G    
Sbjct: 57  KNIADNLSSDD-FANIQAVGP-YVNFAIDHEKLVSSTLKDVLTEKEHYGDQKIGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     VK +    +  
Sbjct: 174 GNEEDVKKDPIMNLFHYYVKFHQEAEKNPELDNEGREWFKKLEDGDPEAVKLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            DM              +    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ 
Sbjct: 283 VDMGEG-----------ENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + +   L+ V   +    A                           L ++++        
Sbjct: 332 AQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKK 391

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++ ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  
Sbjct: 392 QIQEKNPDLADQDQVAHDVGVGAVVFHDLKNDRLDNFDFDLEEVV-RFEGDTGPYVQYTN 450

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A  +  +        +        D     +   LA++PR++  +    EP
Sbjct: 451 ARAQSVLRKAAAMGENPSETDLALD--------DDWAFAVAKDLADFPRIVARSAEKFEP 502

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++G
Sbjct: 503 SVIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTESLRLLG 554

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 555 VNAPKEM 561


>gi|191638719|ref|YP_001987885.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Lactobacillus casei BL23]
 gi|239632092|ref|ZP_04675123.1| arginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066773|ref|YP_003788796.1| arginyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|190713021|emb|CAQ67027.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Lactobacillus casei BL23]
 gi|239526557|gb|EEQ65558.1| arginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439180|gb|ADK18946.1| Arginyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|327382760|gb|AEA54236.1| Arginyl-tRNA synthetase 1 [Lactobacillus casei LC2W]
 gi|327385947|gb|AEA57421.1| Arginyl-tRNA synthetase 1 [Lactobacillus casei BD-II]
          Length = 560

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/610 (21%), Positives = 238/610 (39%), Gaps = 81/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L+           I  + +IE P+    G  +      L++ +   P  IA
Sbjct: 2   DFKELVVKALEPALAGQLDAAAI--KSLIETPKSSDLGDYAFP-TFSLAKIMHRAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +V +I + P  + V   G G++N YL        +  ++    E+  +       V I
Sbjct: 59  SDLVGQIDVTP-FEQVKAVG-GYVNFYLDKISFAHDVLKVIAQAGEHYGDANIGSGNVPI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+ LA++++  GY   +  ++ D G Q   L ++   W 
Sbjct: 117 DMSSPNIAKPMSMGHLRSTVIGNALANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFP--EEKWLPIVKDYSVQAM 241
            + A+  +       YY   + K     EL D+  +        +E+ + + + +   ++
Sbjct: 177 SEDAVKADPIKNLLHYYVEFHEKAEANPELDDEARAWFKRLEDGDEEAIALWRWFRTVSL 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  ++      + D++  L  +  +         S+  + 
Sbjct: 237 AEFNRI-YKILGVDFDSYNGEAFYN----DKMADVVKRLEDKHLL-------KTSQGAEI 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    + E   F   +YV+G++ 
Sbjct: 285 VDLSAYNL----------NPALIKKSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQ 334

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
             + ++L+AV   +    A     +   +         K+S R G+ I L +V+      
Sbjct: 335 REHFQQLKAVLLEMGYDWANDIHHIPFGLITANGK---KLSTRKGNIILLENVLRDAVGL 391

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                               EVG  +V F  L  +  +  DF+  +V     E    YVQ
Sbjct: 392 AKQQIAEKHPDLPNADKVAHEVGVGAVIFHDLKNERLDNFDFNLEEVVRFEGE-TGPYVQ 450

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR  SI R+A              +  P+ +  D +   ++  L +YP ++  A   
Sbjct: 451 YTNARANSILRKAAI------------DPAPEVALSDPAAWDVLRALGDYPSMVLRAAKE 498

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y   LA  F+ ++++ +       V   + +L   RL +V A   ++ + L 
Sbjct: 499 YEPSVIAKYALRLAKAFNKYYANVK-------VLVEDSEL-PARLAMVKATTQVLTNALQ 550

Query: 576 IIGVESPNEM 585
           ++GV +P EM
Sbjct: 551 LLGVGAPEEM 560


>gi|321455642|gb|EFX66770.1| hypothetical protein DAPPUDRAFT_302451 [Daphnia pulex]
          Length = 632

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/632 (20%), Positives = 247/632 (39%), Gaps = 96/632 (15%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL-- 59
            +         + +K+    I    K    +V+    +   G    N AM LS+ L    
Sbjct: 49  NILGKLEELFDSAIKKAFPDI----KDFQVVVVSTTPN--FGDYQFNGAMSLSKLLKTLG 102

Query: 60  ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              +P  +A  +   +  +  ++++ +AG GFIN+ L  S++++ LS +V  GI     +
Sbjct: 103 KSLNPREVAAAVQKCVPPNEVIETLDLAGPGFINIKLKASFVQEQLSLLVTRGIRPPCGV 162

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  +V ++F S N    MHVGH R  ++GD++  L+ F G++V R  ++ D G Q   
Sbjct: 163 --EKKRVMVDFSSPNIAKEMHVGHLRSTIIGDSICRLLEFLGHDVLRINHVGDWGTQFGM 220

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L   +  R+           P G     Y +      +        +F +  +  +VK  
Sbjct: 221 LLAHLEDRFPNFAEETP---PIGDLQSFYKE------SKIRFDSDADFKKRAYACVVKLQ 271

Query: 237 S--------VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYV 286
           S         QA+  + R + + +  + DI I E    F++     ++  +  L   G +
Sbjct: 272 SHDPVYIKGWQAICDVSRREFQKIYDRLDIKIKERGESFYQ---DLMKKTVMLLEEAGVL 328

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-Y 345
            E                + ++++F     G  V   ++KSDG YTY  +D+A  + + +
Sbjct: 329 KED---------------EGRKVMF---APGIAVPLTIVKSDGGYTYDTSDMAAIRQRVH 370

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIKMSK 402
           +   D ++YV+    SG+ + + A A        KK ++  +    V L  D    K   
Sbjct: 371 DEAADWVVYVVDLGQSGHFETIFACAEFAGWLDRKKTRVEHV-GFGVVLGEDRK--KFKS 427

Query: 403 RAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSE 433
           R+ + + L  ++DE                             V    +++  L    + 
Sbjct: 428 RSSETVRLVDLLDEGLRRAKEKLIEKERDKVLTPEELESAQQAVAYGCIKYSDLAHNRNG 487

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+ E  K N   Y+ YAY R RSI R A      +         +  E     
Sbjct: 488 DYVFSFDKMLE-DKGNTAVYLLYAYTRIRSIARTANVTDEQIKKAAADGIPLSHE----- 541

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E++L   L  +P  I   T     + L  +LY++++ F   +       + R       
Sbjct: 542 KEMKLAKLLLRFPETIVRLTFDLCLHPLCEFLYEVSTTFTEFYDVCYCVEKDRT-TGQIV 600

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + M R+ L  A A+++    +++G++   +M
Sbjct: 601 HINMDRMALCEATANVMAQCFSLLGLKPIQKM 632


>gi|302559209|ref|ZP_07311551.1| arginyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302476827|gb|EFL39920.1| arginyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 585

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 126/623 (20%), Positives = 229/623 (36%), Gaps = 78/623 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +  ++  L       + E    D ++    R         N  + L++    +
Sbjct: 1   MASVTSLTDSVQQQLASALTATRPEAAGADPLL----RRSDRADFQANGILALAKKAKAN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +VA +     +  V ++G GF+NL ++   +   L++    G   G  L    
Sbjct: 57  PRELAAEVVAHLTTGDLIKDVEVSGPGFLNLTIADRAITANLAARHADGERLGVPLKENA 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               +++   N    MHVGH R AV+GD L  ++ F+G +    ++I D G Q   L   
Sbjct: 117 GVTVVDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFTGEKTIGRHHIGDWGTQFGMLIQY 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +F    +     D D           +     L   Y +  + F  ++         V A
Sbjct: 177 LFEHPGELAPAADVDG----------EQAMSNLNRVYKASRVLFDSDEEFKERARKRVVA 226

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    ++ L+        F+ E   +    S    +   +  +  V E        +T +
Sbjct: 227 LQSGDKETLELWQ----QFVDESKVYFY--SVFEKLDMEIRDEEIVGESAYNEGMPETAR 280

Query: 301 KCDMDRKQ--------LLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGF 349
             +             + F      DD   PL+  K+DG + Y A+DL   + +  +   
Sbjct: 281 LLEEMGVAVRSEGALVVFFDEIRGKDDQPVPLIVQKADGGFGYAASDLTAIRDRVQDLHA 340

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++YV+    S + + +   A         +    +     L  DG P K   R G+ +
Sbjct: 341 TTLLYVVDVRQSLHFRMVFETARRAGWLNDDVTAHNMGYGTVLGADGKPFK--TREGETV 398

Query: 409 TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
            L  ++DE                           VG  +V++  L    S    FD  +
Sbjct: 399 RLEDLLDEAVQRAAEVVREKARDLTDDEIRERAAQVGIGAVKYADLSTSPSRDYKFDLDQ 458

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +   + +  V Y+QYAYAR +SI R+A ++ P              E E   +E  L +H
Sbjct: 459 MVSLNGDTSV-YLQYAYARIQSILRKAGEVRP----------AAHPELELHEAERALGLH 507

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L  +   +  A     P+KLA YLY LAS++   +           ++A++ +    RL 
Sbjct: 508 LDAFGDTVFEAAAEYAPHKLAAYLYQLASLYTSFYDKC------PVLKADSPEQVENRLF 561

Query: 562 LVHAVASIINSGLNIIGVESPNE 584
           L    A  ++ G+ ++G+ +P  
Sbjct: 562 LCDLTARTLHRGMALLGIRTPER 584


>gi|58337861|ref|YP_194446.1| arginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904511|ref|ZP_04022316.1| arginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75357337|sp|Q5FIQ9|SYR_LACAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|58255178|gb|AAV43415.1| arginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867720|gb|EEJ75141.1| arginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 561

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/608 (21%), Positives = 247/608 (40%), Gaps = 76/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ +  +P  IA
Sbjct: 2   DFKNEVVDLVS---SQVDLPKEKITA-LIERPKNAKMGDYAFP-AFILAKTMHKNPAIIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +  D +  ++   G  ++N  +    L    L  ++     YG   +G+G    
Sbjct: 57  KDIAENLNSD-NFANIQAVGP-YVNFAIDHEKLIASTLKDVLAEKEHYGDQKLGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMKKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++ +  +       YY   + +       D    E     E+   + + + K +   +
Sbjct: 174 GNEEDVKKDPIMSLFHYYVKFHKEAENNPELDNEGREWFKKLEDGDPEAVELWKWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q
Sbjct: 234 -LKDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKDKGLLHE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
             DM             D+    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++
Sbjct: 282 VVDMGE-----------DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + +   L+ V   +    A                           L +++R   +   
Sbjct: 331 QAQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLRDAVNLAK 390

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++ ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY 
Sbjct: 391 KQIQEKNPDLADQDQVAHDVGVGAVVFHDLKNDRLDNFDFDLDEVV-RFEGDTGPYVQYT 449

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            AR +S+ R+A  +        F  N        D     +   LA++PR++  +    E
Sbjct: 450 NARAQSVLRKAAAMGEKPSEGDFNIN--------DDWAFAVAKDLADFPRIVARSAEKFE 501

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A +  DLA  F+ ++++ +   +   +          RL LV A + ++   L ++
Sbjct: 502 PSVIAKFALDLAKKFNKYYANVKILTKDDQI--------GARLALVQATSIVLTESLRLL 553

Query: 578 GVESPNEM 585
           GV +P EM
Sbjct: 554 GVNAPKEM 561


>gi|116629130|ref|YP_814302.1| arginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094712|gb|ABJ59864.1| arginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 564

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/614 (22%), Positives = 254/614 (41%), Gaps = 85/614 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L  DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P 
Sbjct: 5   LSVDFKQKVVDLVSE---QVDLPKEKI-AMLIERPKNAKMGDYAF-PAFALAKIEHKNPA 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGT 121
            IA+ I  +I  D +  S+   G  ++N  +  + L    L+ ++     +G   +GKG 
Sbjct: 60  LIAKEIAEKI-SDDNFTSIEAVGP-YVNFAIDHAKLVNATLNDVLTEKDHFGDQQLGKGN 117

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  + 
Sbjct: 118 VP-IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAY 176

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYS 237
             W  ++ +  +       YY   + +       D       + L   +E+ + + K + 
Sbjct: 177 RLWGNEEDVKKDPITNLFHYYVKFHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWFR 236

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             ++ +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+
Sbjct: 237 EVSLQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SR 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVM 356
             Q  ++             D+    +LKSDGS  Y   DLA     K E  F   +YV 
Sbjct: 285 GAQVVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVA 333

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + SG+ K+L+ V   +    A  N+       + + G   K+S R G+ +        
Sbjct: 334 GGEQSGHFKQLKQVLKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKD 390

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V  +VG  +V F  L     +  DFD  +V  + + +  
Sbjct: 391 AVSLAEQQIEEKNPNLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTG 449

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY  AR +SI R+A     ++  D    N        D     +   +A++P ++  
Sbjct: 450 PYVQYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKAIADFPAIVAK 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A+   EP  +A Y  DL+  F+ ++++ R       +   + +L   RL LV A + ++ 
Sbjct: 499 ASEKFEPSIIAKYALDLSKKFNKYYANVR-------ILDEDDQL-NARLALVQATSIVLT 550

Query: 572 SGLNIIGVESPNEM 585
             L ++GV +P EM
Sbjct: 551 EALRLLGVNAPKEM 564


>gi|297192854|ref|ZP_06910252.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151518|gb|EFH31212.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 587

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 134/624 (21%), Positives = 241/624 (38%), Gaps = 86/624 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L ++   RL + L     +      +L        R         N  + L++ LG +P 
Sbjct: 7   LASNVQQRLADALTAALPEAGAADPLL--------RRSDRADFQANGILALAKKLGGNPR 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  +V  I  +  +  + ++G GF+N+ ++   + + L++        G         
Sbjct: 59  ELAAKVVDAIGPNDVLGDIEVSGPGFLNITITDKAITETLAARAADD-RLGVPFAAGSGT 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I++   N    MHVGH R AV+GD +  ++ F+G +V R ++I D G Q   L   + 
Sbjct: 118 TVIDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGEKVVRRHHIGDWGTQFGMLIQYLI 177

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                     +      +  GV  +     L   Y +    F  ++     KD + + ++
Sbjct: 178 ----------EHPHELDHKDGVSGEEAMSNLNRLYKASRTLFDSDEE---FKDRARRRVV 224

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +   D + L +    F+ E   +    S    +   +     V E        +T +  
Sbjct: 225 DLQSGDEETLALW-QKFVDESKIYFY--SVFEKLDMEIRDPDIVGESGYNDMLDETCRIL 281

Query: 303 DMDRKQL-------LFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDN 351
           +     +       +F   + G D   V   + KS+G Y Y A DL+  + + +  G + 
Sbjct: 282 EESGVAVRSEGALCVFFDDVKGPDGNPVPLIVKKSNGGYGYAATDLSAIRDRVQNLGANT 341

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++YV+ +  S + K +   A        ++  V L     L +DG P K   R G+ + L
Sbjct: 342 LVYVVDARQSLHFKMVFETARRAGWLNDKVKAVQLAFGTVLGKDGKPFK--TREGETVRL 399

Query: 411 RHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             ++DE                             VG  +V++  L         FD  +
Sbjct: 400 VDLLDEAIDRATAVVREKAEKVGLSEQEIVENGRYVGVGAVKYADLSTSAVRDYKFDLDQ 459

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +   + +  V Y+QYAYAR +SI R+A D  P          V   E E   +E  L +H
Sbjct: 460 MVSLNGDTSV-YLQYAYARIQSIKRKAGDRRP----------VAHPELELAPAERALGLH 508

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR-KLTMMRL 560
           L ++  V+     + EP+KLA YLY LAS     +           + A+N  ++   RL
Sbjct: 509 LDQFGEVLAEVASSYEPHKLAAYLYQLASHLTTFYDQCH------VLSADNPAEVVENRL 562

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            LV      ++ G+ ++G+ +P  
Sbjct: 563 FLVDLTGRTLHQGMALLGIRTPER 586


>gi|239942144|ref|ZP_04694081.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239988607|ref|ZP_04709271.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291445591|ref|ZP_06584981.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348538|gb|EFE75442.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 590

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/621 (20%), Positives = 228/621 (36%), Gaps = 69/621 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L+  L +       +    D ++    R         N  + L++ L  +
Sbjct: 1   MASVPSLASTLQQQLADALTAALPDAGTADPLL----RRSDRADFQANGILALAKKLKGN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGK 119
           P  +A  + A +     +  + ++G GF+N+ L+   + + L++         G  +   
Sbjct: 57  PRELAGQVTAALPAGELIKGIEVSGPGFLNITLTDRAIVETLAARAADDEGRLGVPVAAD 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K  I++   N    MHVGH R AV+GD +  ++ F+G +V R ++I D G Q   L  
Sbjct: 117 AGKTVIDYAQPNVAKEMHVGHLRSAVIGDAMVRILEFTGEDVVRRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +        +  D+   E              L   Y +    F  ++         V 
Sbjct: 177 YLIEHPGALKHEGDASDGEAA---------MSTLNRVYKASRALFDSDEEFKARSRDRVV 227

Query: 240 AMMKIIRDDLKALN--IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           A+    R+ L+     +          F + D       I   +    + E      +  
Sbjct: 228 ALQAGDRETLELWQGFVDESKIYFHSVFDKLDMEVRDPDIVGESGYNDMLEETCRILEET 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMI 353
                  +    +F   + G D ++    + K++G Y Y A DL+  + +  +   D ++
Sbjct: 288 GVA-VRSEGALCVFFDDVKGPDGNKVPLIVKKTNGGYGYAATDLSAIRNRVQDLKADTLL 346

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+ +  S + K +   A         +  V L     L +DG P K   R G+ + L  
Sbjct: 347 YVVDARQSLHFKMVFETARRAGWLNEDVKAVQLAFGTVLGKDGKPFK--TREGETVRLED 404

Query: 413 VVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
           ++DE                             VG  +V++  L         FD  ++ 
Sbjct: 405 LLDEAVDRATAVVREKAEKVGLSEDEIVGNGRYVGIGAVKYADLSTSAVRDYKFDLDQMV 464

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
             + +  V Y+QYAYAR +SI R+A D  P              E     +E  L +HL 
Sbjct: 465 SLNGDTSV-YLQYAYARIQSILRKAGDAVP----------AAHPELTLAPAERALGLHLD 513

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++  V+       EP+KLA YLY LAS     +   +          N  ++   RL LV
Sbjct: 514 QFGEVLAEVAAGYEPHKLAAYLYQLASHLTTFYDQCQVLSP-----DNAPEVVENRLFLV 568

Query: 564 HAVASIINSGLNIIGVESPNE 584
              A  ++ G+ ++G+ +P  
Sbjct: 569 ELTARTLHQGMALLGIRTPER 589


>gi|312978134|ref|ZP_07789879.1| arginine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895109|gb|EFQ44178.1| arginine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 561

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/607 (21%), Positives = 245/607 (40%), Gaps = 74/607 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAFP-AFILAKTLHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +  D +  ++   G  ++N  +    L    L  ++     YG   IG+G    
Sbjct: 57  KNIADNLSSD-NFANIQAVGP-YVNFAIDHEKLVSSTLKDVLTEKEHYGDQKIGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPVKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     VK +    +  
Sbjct: 174 GNEEDVKKDPIMNLFHYYVKFHQEAEKNPELDNEGREWFKKLEDGDPEAVKLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            DM              +    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ 
Sbjct: 283 VDMGEG-----------ENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + +   L+ V   +    A                           L ++++        
Sbjct: 332 AQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKK 391

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++ ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  
Sbjct: 392 QIQEKNPDLADQDQVAHDVGVGAVVFHDLKNDRLDNFDFDLEEVV-RFEGDTGPYVQYTN 450

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A  +  +        +        D     +   LA++PR++  +    EP
Sbjct: 451 ARAQSVLRKAAAMGENPSETDLALD--------DDWAFAVAKDLADFPRIVARSAEKFEP 502

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +  DLA  F+ ++++ +       +   + K+   RL LV A + ++   L ++G
Sbjct: 503 SVIAKFALDLAKKFNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTESLRLLG 554

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 555 VNAPKEM 561


>gi|160935632|ref|ZP_02083007.1| hypothetical protein CLOBOL_00522 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441376|gb|EDP19086.1| hypothetical protein CLOBOL_00522 [Clostridium bolteae ATCC
           BAA-613]
          Length = 595

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/631 (19%), Positives = 244/631 (38%), Gaps = 82/631 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D   R    LK+       E      ++  RP  C       N AM  ++     
Sbjct: 1   MNKILDMMER---ELKQAFTASGYEDSFAKVVLSNRPDLCE---YQCNGAMAAAKVYKKK 54

Query: 61  PLTIAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           P+ IA  +V  +      P          GFINL LS ++L +    +  S  + G    
Sbjct: 55  PIDIANQVVEHLVSGGSHPVFSEAEAVMPGFINLKLSEAFLAEYTGFMAQSD-KLGLEAP 113

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   V +++  AN   P+HVGH R A++G+++  +  F G+ +  + ++ D G Q+  +
Sbjct: 114 EKPETVIVDYGGANVAKPLHVGHLRAAIIGESIKRMGRFLGHHMIGDVHLGDWGLQMGLI 173

Query: 178 ALSVFWRYQQALYNNDS---DLP----------EGYYPGVYLKHVGKELADKYSSELLNF 224
              +  R  + +Y ++S     P          E  YP    K    E+  + + +    
Sbjct: 174 IEELRDRKPELVYFDESFEGPFPQEAPFTISELEEIYPAASAKSKADEVFKERAHQATLK 233

Query: 225 PEEKWLP--IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +  + P   +  + +   +  ++ +   LN++ D++  E D        I D+I  L  
Sbjct: 234 LQRGYAPYRAIWQHIMAVSVADLKKNYANLNVEFDLWKGESDAEPY----IGDMIQMLVD 289

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  +E       S+     D      + + T   +     + KSDG+  Y  +DLA   
Sbjct: 290 KGLAHE-------SQGALVVD------VAQDTDTKEIPPCLVRKSDGASLYATSDLATIV 336

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKM 400
            + +    D  IYV+      + +++  VA      K+    + L       +DG P K 
Sbjct: 337 EREQDFKPDRYIYVVDKRQGMHFEQVFRVAKKAGIVKEDTPMIFLGFGTMNGKDGKPFK- 395

Query: 401 SKRAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSEL 434
             R G  + L  +++E                          VG  ++++  L  + ++ 
Sbjct: 396 -TREGGVMRLEKLIEEINEAVYQRIMENRTVSEDEARSTAAVVGLAALKYGDLSNQAAKD 454

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             FD  +     + N   Y+ Y   R +SI  + ++    +  D   + ++       +S
Sbjct: 455 YVFDIERFTSF-EGNTGPYILYTIVRIKSIIAKYRENGGQVSQDAVEKKILACAG---SS 510

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++ LA Y  V+EN+     P+K+  Y+Y+LA+ F+  +         + +   +  
Sbjct: 511 EKALMLMLARYNEVLENSFAETAPHKICQYIYELANAFNSFYHD------TKILAEEDEA 564

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + L+     ++ + + ++G+E+P  M
Sbjct: 565 RKESYIGLISLTRRVLEACIGLLGIEAPERM 595


>gi|226509531|ref|NP_001141350.1| hypothetical protein LOC100273441 [Zea mays]
 gi|194704118|gb|ACF86143.1| unknown [Zea mays]
          Length = 604

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 121/594 (20%), Positives = 224/594 (37%), Gaps = 95/594 (15%)

Query: 40  CAHGHLSTNAAMIL-SRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
                   N AM L S+  G      +P  I + I   +     ++S  +AG GF+N+ L
Sbjct: 52  AKFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVL 111

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S  ++ + +  ++V+GI+     I    +  I+F S N    MHVGH R  ++GDTLA +
Sbjct: 112 SNRWVAQRIQDMLVNGIKTWAP-ILPVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARM 170

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHVG 210
             FS  +V R  ++ D G Q   L   +F ++   Q+       DL   Y    +     
Sbjct: 171 FEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDND 230

Query: 211 KELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            E   +    ++     EE++    K      +  I R +   +  + ++ + E      
Sbjct: 231 PEFKARAQQGVVRLQGGEERYREAWK-----KICDISRSEFDLVYKRLNVVLEEKGESFY 285

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +P  I  +++ L+ +G + E                +  +++F   + G  +   ++KSD
Sbjct: 286 NPY-IPQVLEELSSKGLIKES---------------EGARVIF---IQGHQIPLIVVKSD 326

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN----- 382
           G + Y + DLA    +      + +IYV       +     + A                
Sbjct: 327 GGFNYASTDLAALWYRLNVEQAEWIIYVTDVGQQQHFDMFFSAAKMAGWLPGPNEKKFPK 386

Query: 383 -VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
              +   + L  DG   +   R+ + + L  ++DE                         
Sbjct: 387 TSHVGFGLVLGSDGK--RFRTRSTEVVRLVELLDEAKSRSKSELLQRLTENGKIVDWTDE 444

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L         F F ++    K N   Y+QYA+AR  SI R++
Sbjct: 445 ELEQTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLS-DKGNTAVYLQYAHARICSIIRKS 503

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                  + D+    +    S     E  L ++L  +  V+E A     P  +  YLY+L
Sbjct: 504 -------NKDVEDLKMTGAISLDHPDERVLGLYLIRFAEVVEEACTNLLPNVVCEYLYNL 556

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           + +F   +++ +       V  +  +    RL L  A A ++    N++G+   
Sbjct: 557 SEMFTKFYTNCQ-------VVGSPEE--TSRLLLCQATAVVMRQCFNLLGITPV 601


>gi|229004905|ref|ZP_04162633.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228756349|gb|EEM05666.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
          Length = 562

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/607 (22%), Positives = 238/607 (39%), Gaps = 87/607 (14%)

Query: 15  LKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           L +   +I   +  L++I  +IE P+    G  +    M L++     P  IA+ I  ++
Sbjct: 7   LAKSLFEILKSELSLEQITGLIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKL 65

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
             +     V   G  ++N++ +   +    L +I+V   EYG+   G+   V I++ S N
Sbjct: 66  N-NSFFTKVKAVGP-YVNVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPN 123

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +      + L  
Sbjct: 124 IAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKWGNEELVK 183

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIR-DD 248
            D   P      +Y+     E   +Y    L      W   ++D   +A  +    R + 
Sbjct: 184 ED---PIRELFKLYVHF--HEEVKEYPE--LEEEGRAWFKKLEDGDEEAVFLWNWFRHES 236

Query: 249 LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           LK  +  +++   E    +G+      + D +D L  +G + E                D
Sbjct: 237 LKEFSRIYELLGVEFTNFQGEAFYNDKMGDFVDILEEKGLLEES---------------D 281

Query: 306 RKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
             Q++    +  +D+   L+ KSDG+  Y   DL     +     FD  +YV+G++ S +
Sbjct: 282 GAQVV---NLEKEDMPPCLIKKSDGATLYATRDLTAALYRQNTYEFDKALYVVGAEQSLH 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG------------------ 405
             +   V   +        +       + +DG   KMS R G                  
Sbjct: 339 FTQFFTVLKKLGYNWVD-GMAHVPFGLILKDGK--KMSTRKGKVVLLEEVLEEAITLAEQ 395

Query: 406 -------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                  D      V  +VG  +V F  L  +    ++F   K+ +   E    YVQY +
Sbjct: 396 NIEEKNPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGE-TGPYVQYTH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI R+    F    F L            D      I  L  +P+V+E A    EP
Sbjct: 455 ARACSILRKENAEFETEAFQLN-----------DDHSWSTIKLLNRFPQVVETAFFKNEP 503

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A YL D+A  F+ ++ + R       +   +++    RL LV+AV  ++  GL ++G
Sbjct: 504 SHIAKYLLDVAQAFNKYYGNVR-------ILEEDKE-KESRLALVYAVTIVLKEGLRLLG 555

Query: 579 VESPNEM 585
           + +P EM
Sbjct: 556 MGAPEEM 562


>gi|257867704|ref|ZP_05647357.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874031|ref|ZP_05653684.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257801787|gb|EEV30690.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808195|gb|EEV37017.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 563

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 119/607 (19%), Positives = 237/607 (39%), Gaps = 80/607 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +   ++  E   ++++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAQAIHQVVKEDLSIEQVQQLLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFV 128
            +I      + + + G  ++N ++    +   +  + +     +G   IG    V I+  
Sbjct: 63  EKIDQ-ASFEKIEVVGP-YLNFFMDKKAISAHVLEMVLKEKNHFGDQTIGNQQAVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
           A+       P      +Y+        DK     L      W   ++D    ++      
Sbjct: 181 AVKAE----PINELLRLYVDFHEAAETDK----QLEDDARAWFKKLEDGDQEAMDLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + LK  N  +D+     D   G+      + ++++ L  +  + E        +  + 
Sbjct: 233 RDESLKEFNKIYDMLEVSFDSLNGEAFYNDKMTEVVELLEEKHLLKE-------DQGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   D+A    +     F   +YV+G++ 
Sbjct: 286 VDLAAYDL----------NPALIRKSDGATLYITRDMAAALYRKRTYNFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQI----------------------NVLLCELVRLYRDGMPI 398
           S + K+L+AV   +  + A                         VLL E++    D    
Sbjct: 336 SYHFKQLKAVLKEMGFEWADDMTHVPFGLITKDGKKLSTRKGKIVLLEEVLNEAIDSAKE 395

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +++++         V  +VG  +V F  L        DF   +V     E    YVQY++
Sbjct: 396 QITEKNPTLENKEEVAKQVGVGAVVFHDLKNDRLNNFDFTLEEVVRFEGE-TGPYVQYSH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI  +A           F    +   S  DT   ++I  +  YP  +  A    EP
Sbjct: 455 ARAMSILEKAD----------FDPAAVSSLSLADTESWEVIKLIQRYPETVLQAAEKYEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +   LA  F+ ++++ +       + A + +    RL LV+AV +++   L ++G
Sbjct: 505 SVIAKHAIKLAQAFNKYYANVK-------ILAEDAE-KDARLALVYAVTTLLKEDLRLLG 556

Query: 579 VESPNEM 585
           + +P++M
Sbjct: 557 LHAPDKM 563


>gi|228958480|ref|ZP_04120200.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801107|gb|EEM48004.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 562

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 234/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   DP    V   G  ++N++ +   +   +L +I+    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKELEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++I  A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIGAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|50302751|ref|XP_451312.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640443|emb|CAH02900.1| KLLA0A07040p [Kluyveromyces lactis]
          Length = 649

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 144/631 (22%), Positives = 246/631 (38%), Gaps = 103/631 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI           +E       G L       L R  G++P  IA
Sbjct: 71  NVVDLMRNYITQELAKISDVPAEQIYPALEWTNTLERGDLLIPVP-RLVRKKGINPKEIA 129

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           E    +      ++ V   G  F+  +  P +L KI L  I+    +YG + +G   K+ 
Sbjct: 130 EEWATKFPCGDYLEKVEANGP-FVQFFFKPEFLFKIVLPDILTRKEKYGSSPLGGNKKIL 188

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  L++L    G++VTR  Y+ D G Q   LA+    +
Sbjct: 189 IEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEQLGWDVTRINYLGDWGKQFGVLAVGFERY 248

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEK 228
             ++AL N+    P  +   VY+   K +  E             A  Y  ++ +   E 
Sbjct: 249 GDEEALRND----PINHLFEVYVRINKDIENEGDTLSEEESTDGKARSYFKKMEDGDPEA 304

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I+     LNI++D++  E    +     +   +     +   +E
Sbjct: 305 -LKIWKRFRELSIEKYIK-TYARLNIKYDVYSGESQVSK---EQMDKAMRMFEDKNLTHE 359

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER 347
                           DR   L   T     + +  + KSDG+  Y   D+     +YE+
Sbjct: 360 ----------------DRGATLIDLTKFNKKLGKTIVQKSDGTTLYLTRDVGAAMDRYEK 403

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV+      +V +   +   +  + A         ++    GM   MS R G 
Sbjct: 404 YHFDQMIYVIACQQDLHVAQFFEILKQLGFEWAN-------RLQHVNFGMVQGMSTRKGT 456

Query: 407 FITLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFD 438
            + L ++++E                            VG  +V    +  K     +F 
Sbjct: 457 VVFLDNILEETKEKMHEVMRKNETKYAQIENPDEVADLVGISAVMIQDMQAKRINNYEFK 516

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTS 494
           + ++    + +   Y+QYA++R RS+ R A DI PD     DF L            + +
Sbjct: 517 WERMTSF-EGDTGPYLQYAHSRLRSVERNASDITPDQWVSADFSLL----------HEPA 565

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
            + L+  LA+YP V+ NA    EP  +  YL+ L       +        + +V     +
Sbjct: 566 AVILVRLLAQYPDVLRNAIKTHEPSTVVTYLFKLTHQVSSCYD-------VLWVAGQTPE 618

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   RL L  A   ++N+G+ ++G+   + M
Sbjct: 619 LAAARLALYGAARQVLNNGMRLLGLTPVDRM 649


>gi|296393184|ref|YP_003658068.1| arginyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180331|gb|ADG97237.1| arginyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 590

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 123/621 (19%), Positives = 221/621 (35%), Gaps = 86/621 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +++ +  ++E       E+      VI   R   H     N  + L+R L  +P  +A 
Sbjct: 12  LAAQAEAAVREAFKAALGEQAAGADPVI---RPSEHADYQANGVLALARQLKANPRELAG 68

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            + AR++       V  +G GF+NL  + S L   L+         G     +G    I+
Sbjct: 69  KVAARLESSELFAQVEASGPGFLNLVFADSALTGQLAERHGD-PRLGLGAPKQGRTTVID 127

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + + N    MHVGH R  ++GD L  L+ F+G +V R+ ++ D G Q   L   +     
Sbjct: 128 YSAPNIAKEMHVGHLRSTIIGDALVRLLTFTGSQVIRQNHVGDWGTQFGMLIEHLLENPD 187

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--------V 238
               + D D           K      A         F       +V   S         
Sbjct: 188 VRGGDEDGDTAAISRLAALYKA-----ARARFDTDEQFQARARQRVVALQSGDPETIAGW 242

Query: 239 QAMMKIIRDDLKALNIQHDIFI------SEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           Q ++   +     +  +  + +       E  ++      ++ I D+L ++G        
Sbjct: 243 QEIVAESKTYFGEIYTKLGVLLTDDDIAGESSYN----DELQGIADDLEQRGVAVRSHGA 298

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDN 351
                       D+                 + KSDG + Y A DLA  + +  +     
Sbjct: 299 LCVFFDDVVDKDDKPVPF------------IIQKSDGGFGYAATDLATLRHRVRDLKATR 346

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITL 410
           ++YV+GS  + + K +   A         + V   +    L  DG P K   R G+ I L
Sbjct: 347 LLYVVGSPQALHFKMVFETARRAGYLPDGVEVAHVQFGSVLGADGKPFK--SREGETIRL 404

Query: 411 RHVVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++D                           EVG  + ++  L    +    FD  ++ 
Sbjct: 405 IALLDEAVARAKATIAERSPELEPNAQELRAHEVGIGAAKYADLSTSRTRDYVFDLDRML 464

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYA+AR RS+  +A +  P  +    P          + +E  L++ L 
Sbjct: 465 SL-QGNTGVYLQYAHARIRSLLARAGEAGPAPEGVPAP---------LEPAERALLLALD 514

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+  V+++   + EP++L  YLY LA  F   +            +A       +R  + 
Sbjct: 515 EFGDVLKSVDESLEPHRLCAYLYTLAQAFSDFYEAC------PVAKAPTAGQRRLRTAIC 568

Query: 564 HAVASIINSGLNIIGVESPNE 584
                 +  GL+++G+ +P  
Sbjct: 569 ELTGDTLALGLSLLGIAAPER 589


>gi|148379062|ref|YP_001253603.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932090|ref|YP_001383444.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934799|ref|YP_001386991.1| arginyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166232777|sp|A7FSW7|SYR_CLOB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232778|sp|A5I0R5|SYR_CLOBH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148288546|emb|CAL82626.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928134|gb|ABS33634.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930713|gb|ABS36212.1| arginine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 563

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/613 (20%), Positives = 243/613 (39%), Gaps = 84/613 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLISAYRRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAM 241
             ++AL  +      G    +Y+K  G+   D        LNF   K L    +   +  
Sbjct: 175 VDEEALEKD----AIGELLRIYVKFHGEAEKDPELEKEARLNF---KRLEEGSEEETELW 227

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +     LK  N  +D+   + D   G+      +  ++  +  +G + +       S  
Sbjct: 228 NRFKDLSLKEFNKVYDMLGIKFDSLAGESFYSDKMDAVVQEIDDKGLLVD-------SNG 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
            +   +D   +              + KSDG+  Y   DLA    + +   F   IYV+G
Sbjct: 281 AKVVMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYVVG 330

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +  + + K++      +    A     +   +    +    K+S R GD + L  ++++ 
Sbjct: 331 TPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLNQS 387

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +G  +V F  L       + FD+ ++     E    
Sbjct: 388 VEETLKIINEKNPNLKNKGDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-TGP 446

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YV+Y+YAR +SI R+A ++  + D+                 E +L   L  +   I NA
Sbjct: 447 YVEYSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIMNA 496

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I +
Sbjct: 497 IDKLEPAMVTRYVIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVIKN 550

Query: 573 GLNIIGVESPNEM 585
            LN++G++   EM
Sbjct: 551 ALNLLGIDVVEEM 563


>gi|260436601|ref|ZP_05790571.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414475|gb|EEX07771.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 590

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/613 (22%), Positives = 224/613 (36%), Gaps = 92/613 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L   L+    +   E        +        G    N A+ L++PL   P  IA 
Sbjct: 4   LSQSLDAQLRAAMQRAFPEADAGLDPQLAPASKPEFGDFQANGALPLAKPLKQAPRQIAS 63

Query: 67  LIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IV +++ DP          IAG GFINL + P  L   +S+ +      G   +     
Sbjct: 64  AIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERLAAEVSARLGD-ERLGVPAVSNAAP 122

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+LA ++ F G+ V R  ++ D G Q   L   + 
Sbjct: 123 VVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLK 182

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +AL   D+              +G +L   Y      F +++         V  + 
Sbjct: 183 QVAPEALDTADA------------VDLG-DLVAFYREAKKRFDDDEAFQSTSRDEVVKLQ 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQK 301
                 LKA  +            R +   I D +D  L+ +G  +     P      + 
Sbjct: 230 GGDPVSLKAWGLLCAQ-------SRREFQKIYDRLDIRLSERGESFYNPFLPAVIDGLKA 282

Query: 302 CDM----DRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-----ERGF 349
            ++    D  Q +F   M G D   +   + KSDG + Y   DLA  + ++       G 
Sbjct: 283 AELLVTDDGAQCVFLEGMQGKDSKPLPVIVQKSDGGFNYATTDLAAIRYRFGVAPEGDGA 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++YV  +  + +   +  VA         A++  +   LV+   DG   K+  RAGD 
Sbjct: 343 RRVVYVTDAGQANHFAGVFQVAERAGWIPDGARLEHVPFGLVQ-GEDGK--KLKTRAGDT 399

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + LR ++DE                               VG  +V++  L +       
Sbjct: 400 VRLRDLLDEAVERAETDLRSRLKEEERSESEEFIQHVAGTVGLAAVKYADLSQNRITNYQ 459

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F F ++    + N   Y+ YA  R   I R+          DL   N   Q SE    E 
Sbjct: 460 FSFDRMLAL-QGNTAPYLLYALVRIAGIARKGG--------DLAGTNAQLQFSE--PQEW 508

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L ++  VI        P +L  Y ++L+ VF+  +       ++  ++A+   L 
Sbjct: 509 ALVRELLKFDAVIAEVEEELLPNRLCSYTFELSQVFNRFYD------QVPVLKADPEAL- 561

Query: 557 MMRLQLVHAVASI 569
             RL L    A  
Sbjct: 562 ASRLALCRLTADT 574


>gi|229144803|ref|ZP_04273200.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228638525|gb|EEK94958.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
          Length = 562

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 234/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKAPALIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + +  +   D     V   G  ++N++ +   +   +L +++    E+G+N  G    V 
Sbjct: 59  KEVAEKFN-DTFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +    GFD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRAILLEEVLEEAIE 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEVVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P++IE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    R+ LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYILDVAQSFNKYYGNVRIL--------EESKEKDSRIALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|229552588|ref|ZP_04441313.1| arginine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539960|ref|YP_003174459.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314140|gb|EEN80113.1| arginine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151636|emb|CAR90608.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 560

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 242/611 (39%), Gaps = 83/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L  +      E  I    ++E P+    G  +      L++ L   P  IA
Sbjct: 2   DFKELVVKALVPVLDGQLDEAGITA--LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +VA+I   P  + V   G G++N YL   S+  ++L +I  SG  +G   +G+G    
Sbjct: 59  SDLVAKIDASP-FEQVKAVG-GYVNFYLDKISFAHEVLKAIAQSGEHFGDAKLGEGNVP- 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+ LA+++   GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPMSMGHLRSTVIGNALANILQKVGYSPIKINHLGDWGTQFGKLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVY-LKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             +  +  +       YY   + +     EL D+  +        +++ + + + +   +
Sbjct: 176 GSEADVKADPIKNLLQYYVKFHEVAETDPELEDEARAWFKRLEDGDKEAITLWRWFRTVS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  ++      +  ++  L  +  +         S+  +
Sbjct: 236 LAEFNRI-YKILGVDFDSYNGEAFYN----DKMDSVVKTLEDKHLL-------KTSQGAE 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
             D+ +  L              + KSDG+  Y   DLA    + E   F   +YV+G++
Sbjct: 284 IVDLSKYNL----------NPALIKKSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              + ++L+AV   +  + A     +   +         K+S R G+ I           
Sbjct: 334 QREHFQQLKAVLLEMGYEWANDIHHIPFGLITANGK---KLSTRRGNIILLEKVLKDAVG 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  EVG  +V F  L  +  +  DF+  +V     E    YV
Sbjct: 391 LAQQQIDEKHPDLPNAEKVAHEVGVGAVIFHDLKNERLDNFDFNLEEVVRFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR  SI R+A                 P+ +  D +   ++  L +YP ++  A  
Sbjct: 450 QYTNARAHSILRKANIAP------------APEVALSDPAAWDVLRALGDYPSIVVRAAK 497

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ ++++ +       V   + +L   RL +V A   ++ + L
Sbjct: 498 EYEPSVIAKYALRLAKAFNKYYANVK-------VLVEDSEL-PARLAMVSATTQVLENAL 549

Query: 575 NIIGVESPNEM 585
           +++GV +P EM
Sbjct: 550 HLLGVAAPEEM 560


>gi|254388302|ref|ZP_05003537.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294814347|ref|ZP_06772990.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442738|ref|ZP_08217472.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197702024|gb|EDY47836.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326946|gb|EFG08589.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 587

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/614 (21%), Positives = 231/614 (37%), Gaps = 66/614 (10%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L +D   RL + L     +      +L        R         N  + L++ L  +P 
Sbjct: 7   LASDVHQRLADALTAALPEAGPADPLL--------RRSDRADFQANGILALAKKLKGNPR 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  +V  I  +  +  + ++G GF+N+ L+   + + L++        G  L      
Sbjct: 59  ELAAQVVDAIGENDVLKEIEVSGPGFLNITLTDGAIVRTLAARAADD-RLGVPLRDHPGT 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I++   N    MHVGH R AV+G  +  ++ F+G  V R ++I D G Q   L   + 
Sbjct: 118 TVIDYAQPNVAKEMHVGHLRSAVIGAAMTEILEFTGETVVRRHHIGDWGTQFGMLIQYLI 177

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +  +   +++      G         L     +   +  E K     +  ++QA  
Sbjct: 178 EHPHELDHQEGAEV-----SGEEAMSSLNRLYKASRALFDSDEEFKARARDRVVALQAGD 232

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R   +    +  I+     F + D       I   +    + +      +       
Sbjct: 233 PETRALWQRFVDESKIYFY-SVFDKLDMEIRDPDIVGESGYNDMLDETCRLLEESGVA-V 290

Query: 303 DMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
             +    +F   + G D   V   + KS+G Y Y A DL+  + + +R G D +IYV+ +
Sbjct: 291 RSEGALCVFFDDVKGPDGNPVPLIVRKSNGGYGYAATDLSAIRDRVQRLGADTLIYVVDA 350

Query: 359 DHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
             S + K +   A         +  V L     L  DG P K   R G+ + L  ++DE 
Sbjct: 351 RQSLHFKMVFETARRAGWLGEGVKAVQLAFGTVLGSDGKPFK--TREGETVRLVDLLDEA 408

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L    +    FD  ++   + +  
Sbjct: 409 IDRASAVVREKARDLTDEEIAERGTQVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTS 468

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V Y+QYAYAR +SI R+A ++ P    +L              +E  L +HL ++   I 
Sbjct: 469 V-YLQYAYARIQSIKRKAGEVRPKAHPELA----------LAPAERALGLHLDQFAETIA 517

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
               A EP+KLA YLY LAS     +   +          N  ++   RL L+   A  +
Sbjct: 518 EVAAAYEPHKLAAYLYQLASHLTRFYDQCQVLSA-----ENPPEVVENRLFLIDLTARTL 572

Query: 571 NSGLNIIGVESPNE 584
           + G+ ++G+ +P  
Sbjct: 573 HQGMGLLGIRTPER 586


>gi|257876610|ref|ZP_05656263.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257810776|gb|EEV39596.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 563

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 122/610 (20%), Positives = 240/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +   ++  E   ++++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAQAIHQVVKEDLSIEQVQQLLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFV 128
            +I      + + + G  ++N ++    +   +  + +     +G   IG    V I+  
Sbjct: 63  EKIDQ-ASFEKIEVVGP-YLNFFMDKKAISAHVLEMVLKEKNHFGDQTIGNQQAVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
           A+       P      +Y+        DK     L      W   ++D    ++      
Sbjct: 181 AVKAE----PINELLRLYVDFHEAAETDK----QLEDDARAWFKKLEDGDQEAMDLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + LK  N  +D+     D   G+      + ++++ L  +  + E        +  + 
Sbjct: 233 RDESLKEFNKIYDMLEVSFDSLNGEAFYNDKMTEVVELLEEKHLLKE-------DQGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   D+A    +     F   +YV+G++ 
Sbjct: 286 VDLAAYDL----------NPALIRKSDGATLYITRDMAAALYRKRTYNFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +  + A  ++       + +DG   K+S R G  + L  V++E    
Sbjct: 336 SYHFKQLKAVLKEMGFEWAD-DMTHVPFGLITKDGK--KLSTRKGKIVLLEEVLNEAIDS 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AKEQITEKNPTLENKEAVAKQVGVGAVVFHDLKNDRLNNFDFTLEEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y++AR  SI  +A           F    +   S  DT   ++I  +  YP  +  A   
Sbjct: 452 YSHARAMSILEKAD----------FDPAAVSSLSLADTESWEVIKLIQRYPETVLQAAEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ ++++ +       + A + +    RL LV+AV +++   L 
Sbjct: 502 YEPSVIAKHAIKLAQAFNKYYANVK-------ILAEDAE-KDARLALVYAVTTLLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P++M
Sbjct: 554 LLGLHAPDKM 563


>gi|239929677|ref|ZP_04686630.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291437997|ref|ZP_06577387.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291340892|gb|EFE67848.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 591

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 126/620 (20%), Positives = 229/620 (36%), Gaps = 66/620 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +  ++  L       + E    D ++    R         N  + L++    +
Sbjct: 1   MASVTSLNDSVQQQLASALSATRPEAAGADPLL----RRSDRADFQANGILALAKKAKAN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGK 119
           P  +A  +VA +     +  V ++G GF+N+ ++   + + L++         G     +
Sbjct: 57  PRELAAEVVAHVVTGDVIKDVEVSGPGFLNITITDRAIIENLAARYADDTGRLGVPFAER 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                I++   N    MHVGH R AV+GD++  L+ F+G  V R ++I D G Q   L  
Sbjct: 117 PGTTVIDYAQPNVAKEMHVGHLRSAVIGDSVVQLLEFTGENVIRRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----D 235
            +     +  + +  D        +       + A K       F       +V     D
Sbjct: 177 YLDEHPHELDHKSAEDGAVSGEEAMSNLDRLYKAARKLFDSDEEFKTRARRRVVDLQAGD 236

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +  AM +   D+ K   I       + D    DP  + +     +    +        +
Sbjct: 237 PATLAMWQRFVDESK---IYFFSVFEKLDMEIRDPDIVGE-----SGYNDMLAETCRLLE 288

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNM 352
                        + F      D    PL+  KSDG + Y A DL+  + + +    D +
Sbjct: 289 ESGVAVRSEGALCVFFDDIKGPDGKPVPLIVQKSDGGFGYAATDLSAIRDRVFHLKADTL 348

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +YV+ +  + + + +   A         +  V L     L +DG P K   RAG+ + L 
Sbjct: 349 LYVVDARQALHFRMVFETARRAGWLNDDVKAVQLAFGTVLGKDGKPFK--TRAGETVRLV 406

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            ++DE                           VG  +V++  L    +    FD  ++  
Sbjct: 407 DLLDEAIERASAVVREKAQDLSEEEIAERGTQVGIGAVKYADLSTSANRDYKFDLDQMVS 466

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            + +  V Y+QYAYAR RSI R+A +           R     E     +E  L +H+  
Sbjct: 467 LNGDTSV-YLQYAYARIRSILRKAPEGV---------RPAAHPELSLHEAERALGLHVDA 516

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   +  A     P+KLA YLY LAS++   +           ++A + +    RL L  
Sbjct: 517 FAETVAEAAREYAPHKLAAYLYQLASLYTSFYDKC------PVLKAESPEQVANRLFLCD 570

Query: 565 AVASIINSGLNIIGVESPNE 584
             A+ ++ G+ ++G+ +P  
Sbjct: 571 VTAATLHRGMALLGIRTPER 590


>gi|228991186|ref|ZP_04151145.1| Arginyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228768599|gb|EEM17203.1| Arginyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 562

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/607 (22%), Positives = 239/607 (39%), Gaps = 87/607 (14%)

Query: 15  LKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           L +   +I   +  L++I  +IE P+    G  +    M L++     P  IA+ I  ++
Sbjct: 7   LAKSLFEILKSELSLEQITGLIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKL 65

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
             +     V   G  ++N++ +   +    L +I+V   EYG+   G+   V I++ S N
Sbjct: 66  N-NSFFTKVEAVGP-YVNVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPN 123

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +         + 
Sbjct: 124 IAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY------KKWG 177

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIR-DD 248
           N+  + E     ++  +V      K   EL       W   ++D   +A  +    R + 
Sbjct: 178 NEELVKEDPIRELFKLYVHFHEEVKEHPELEEEG-RAWFKKLEDGDEEAVFLWNWFRHES 236

Query: 249 LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           LK  +  +++   E    +G+      + D +D L  +G + E                D
Sbjct: 237 LKEFSRIYELLGVEFTNFQGEAFYNDKMGDFVDILEEKGLLEES---------------D 281

Query: 306 RKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
             Q++    +  +D+   L+ KSDG+  Y   DL     +     FD  +YV+G++ S +
Sbjct: 282 GAQVV---NLEKEDMPPCLIKKSDGATLYATRDLTAALYRQNTYEFDKALYVVGAEQSLH 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG------------------ 405
             +   V   +        +       + +DG   KMS R G                  
Sbjct: 339 FTQFFTVLKKLGYNWVD-GMAHVPFGLILKDGK--KMSTRKGKVVLLEEVLEEAITLAEQ 395

Query: 406 -------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                  D      V  +VG  +V F  L  +    ++F   K+ +   E    YVQY +
Sbjct: 396 NIEEKNPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFFLEKMLKFEGE-TGPYVQYTH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI R+    F    F L            D      I  L  +P+V+E A    EP
Sbjct: 455 ARACSILRKENAEFETEAFQLN-----------DDHSWSTIKLLNRFPQVVETAFFKNEP 503

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A YL D+A  F+ ++ + R       +   +++    RL LV+AV  ++  GL ++G
Sbjct: 504 SHIAKYLLDVAQAFNKYYGNVR-------ILEEDKE-KESRLALVYAVTIVLKEGLRLLG 555

Query: 579 VESPNEM 585
           + +P EM
Sbjct: 556 MGAPEEM 562


>gi|329666892|gb|AEB92840.1| arginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 558

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/611 (22%), Positives = 255/611 (41%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P  IA
Sbjct: 2   DFKQKVVDLVSE---QVDLPKEKIS-MLIERPKNPKMGDYAFP-AFALAKIEHKNPALIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  +I  D +  S+   G  ++N  +  + L    L+ ++     +G   +G+G    
Sbjct: 57  KDIAEKI-SDDNFTSIQAVGP-YVNFAIDHAKLVNATLNDVLTEKEHFGDQKLGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAYRLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQA 240
             ++ +  +       YY   + +       +       + L   +E+ + + K +   +
Sbjct: 174 GNEEDVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             ++             D+    +LKSDGS  Y   DLA     K E  F   +YV G +
Sbjct: 282 VVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVAGGE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            +G+ K+L+ V   +    +  N+       + + G   K+S R G+ +           
Sbjct: 331 QTGHFKQLKQVLKKMGYDWSD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDQVLKDAVS 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           + V  +VG  +V F  L     +  DFD  +V  + + +   YV
Sbjct: 388 LAEQQIEEKNPNLSNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     ++  D    N        D     +   LA++P ++E A+ 
Sbjct: 447 QYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  DL+  F+ ++++ R       +   + +L   RL LV A + ++   L
Sbjct: 496 KFEPSIIAKYALDLSKKFNKYYANVR-------ILDEDDQL-NARLALVQATSIVLTEAL 547

Query: 575 NIIGVESPNEM 585
            ++GV +P EM
Sbjct: 548 RLLGVNAPKEM 558


>gi|188588753|ref|YP_001921709.1| arginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238691964|sp|B2UW74|SYR_CLOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188499034|gb|ACD52170.1| arginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 563

 Score =  375 bits (964), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/615 (22%), Positives = 244/615 (39%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D+ +++   +K+ +D  I   +K     +IE P     G  +      LS+ +   P  I
Sbjct: 2   DYKNKIAQLIKQHVDLDIDAIEK-----LIEIPPKSEMGDYAFP-CFQLSKVMRKAPNMI 55

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE +   I  D   + +   G  ++N ++    +    ++ I+  G  YG + IG+G  V
Sbjct: 56  AETLKDAINKDG-FERIENLGP-YLNFFVDKGVFAENTINKILKDGDSYGESNIGEGKTV 113

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-F 182
            +E+ S N   P HVGH     +G++L  +    GY+V    ++ D G Q   L  +   
Sbjct: 114 CVEYSSPNIAKPFHVGHLFTTAIGNSLYKMFKKEGYDVVGLNHLGDWGTQFGKLISAYNR 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQA 240
           W  ++AL       P      +Y+K       +      L      +   ++  D   QA
Sbjct: 174 WVDEEALEKA----PIDELLRIYVKFHD----EAEKDPSLEDEGRMYFKKLETGDAEAQA 225

Query: 241 MMKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKS 296
           + K  RD  LK     +DI   + D   G+      +  +++ L  +G + E       S
Sbjct: 226 LWKRFRDLSLKEFERVYDILGVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              Q   +D   +              +LK DG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAQVVMLDDYNM----------PPCIVLKGDGASIYATRDLAAAMYRKKTYDFYKSIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +GS  + + K++  V      + A   V +   +  + D    K+S R G+ + L  ++ 
Sbjct: 329 VGSPQALHFKQVFKVLELAGHEWANDCVHVGFGLVKFADR---KLSTRKGEVVLLDDLIR 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L     + + FD+ ++     E  
Sbjct: 386 ESVEKTLEVINEKNPELENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR  SI  +A++I  ++D+                 E +L+  LA +   I+
Sbjct: 445 GPYVQYSYARANSIISRAENISSEVDYSKLSSK----------EEFELVKVLANFNNQIK 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            AT   EP  L  Y+ D+A  F+  ++          +  ++  L   RL LV +   +I
Sbjct: 495 LATDKLEPSILTRYVIDVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++G++   +M
Sbjct: 549 KNGLELLGIDVVEKM 563


>gi|199598041|ref|ZP_03211465.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199591131|gb|EDY99213.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 560

 Score =  375 bits (964), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 242/611 (39%), Gaps = 83/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L  +      E  I    ++E P+    G  +      L++ L   P  IA
Sbjct: 2   DFKELVVKALVPVLDGQLDEAAITA--LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +VA+I   P  + V   G G++N YL   S+  ++L +I  SG  +G   +G+G    
Sbjct: 59  SDLVAKIDASP-FEQVKAVG-GYVNFYLDKISFAHEVLKAIAQSGEHFGDAKLGEGNVP- 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+ LA+++   GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPMSMGHLRSTVIGNALANILQKVGYSPIKINHLGDWGTQFGKLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVY-LKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             +  +  +       YY   + +     EL D+  +        +++ + + + +   +
Sbjct: 176 GSEADVKADPIKNLLQYYVKFHEVAETDPELEDEARAWFKRLEDGDKEAITLWRWFRTVS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  ++      +  ++  L  +  +         S+  +
Sbjct: 236 LAEFNRI-YKILGVDFDSYNGEAFYN----DKMDSVVKTLEDKHLL-------KTSQGAE 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
             D+ +  L              + KSDG+  Y   DLA    + E   F   +YV+G++
Sbjct: 284 IVDLSKYNL----------NPALIKKSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              + ++L+AV   +  + A     +   +         K+S R G+ I           
Sbjct: 334 QREHFQQLKAVLLEMGYEWANDIHHIPFGLITANGK---KLSTRRGNIILLEKVLKDAVG 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  EVG  +V F  L  +  +  DF+  +V     E    YV
Sbjct: 391 LAQQQIDEKHPDLPNAEKVAHEVGVGAVIFHDLKNERLDNFDFNLEEVVRFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR  SI R+A                 P+ +  D +   ++  L +YP ++  A  
Sbjct: 450 QYTNARAHSILRKA------------SIAPAPEVALSDPAAWDVLRALGDYPSIVVRAAK 497

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ ++++ +       V   + +L   RL +V A   ++ + L
Sbjct: 498 EYEPSVIAKYALRLAKAFNKYYANVK-------VLVEDSEL-PARLAMVAATTQVLENAL 549

Query: 575 NIIGVESPNEM 585
           +++GV +P EM
Sbjct: 550 HLLGVAAPEEM 560


>gi|226948350|ref|YP_002803441.1| arginine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254782953|sp|C1FK28|SYR_CLOBJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|226843718|gb|ACO86384.1| arginine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 563

 Score =  375 bits (964), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/610 (19%), Positives = 238/610 (39%), Gaps = 78/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  S + R
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLI-SAYRR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +          + E     V      ++  +      LNF   K L    +   +   + 
Sbjct: 174 WVDEEALEKDAIGELLRIYVKFHEEAEKDPELEKEARLNF---KRLEEGSEEETELWNRF 230

Query: 245 IRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               LK  N  +D+   + D   G+      +  ++  +  +G + +       S   + 
Sbjct: 231 KDLSLKEFNKVYDMLGIKFDSLAGESFYSDKMDAVVQEIDDKGLLVD-------SNGAKV 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             +D   +              + KSDG+  Y   DLA    + +   F   IYV+G+  
Sbjct: 284 VMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYVVGTPQ 333

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + K++      +    A     +   +    +    K+S R GD + L  ++++    
Sbjct: 334 ALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLNQSVEE 390

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +G  +V F  L       + FD+ ++     E    YV+
Sbjct: 391 TLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-TGPYVE 449

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y+YAR +SI R+A ++  + D+                 E +L   L  +   I NA   
Sbjct: 450 YSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIMNAIDK 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I + LN
Sbjct: 500 LEPAMVTRYIIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVIKNALN 553

Query: 576 IIGVESPNEM 585
           ++G++   EM
Sbjct: 554 LLGIDVVEEM 563


>gi|42518608|ref|NP_964538.1| arginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81668171|sp|Q74KR5|SYR_LACJO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|41582893|gb|AAS08504.1| arginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 558

 Score =  375 bits (964), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/611 (22%), Positives = 256/611 (41%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P  IA
Sbjct: 2   DFKQKVVDLVSE---QVDLPKEKIS-MLIERPKNPKMGDYAFP-AFALAKIEHKNPALIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  +I  D +  S+   G  ++N  +  + L    L+ ++     +G   +G+G    
Sbjct: 57  KDIAEKI-SDDNFTSIQAVGP-YVNFAIDHAKLVNATLNDVLTEKEHFGDQKLGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  +    
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAYRLW 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             +     D      +Y   + +   K+  L D+  +        +E+ + + K +   +
Sbjct: 174 GNEGDVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             ++             D+    +LKSDGS  Y   DLA     K E  F   +YV G +
Sbjct: 282 VVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVAGGE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            +G+ K+L+ V   +    +  N+       + + G   K+S R G+ +           
Sbjct: 331 QTGHFKQLKQVLKKMGYDWSD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDQVLKDAVS 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           + V  +VG  +V F  L     +  DFD  +V  + + +   YV
Sbjct: 388 LAEQQIEEKNPNLSNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     ++  D    N        D     +   LA++P ++E A+ 
Sbjct: 447 QYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  DL+  F+ ++++      +R +  +N+     RL LV A + ++   L
Sbjct: 496 KFEPSIIAKYALDLSKKFNKYYAN------VRILDEDNQ--LNARLALVQATSIVLTEAL 547

Query: 575 NIIGVESPNEM 585
            ++GV +P EM
Sbjct: 548 RLLGVNAPKEM 558


>gi|227890475|ref|ZP_04008280.1| arginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849044|gb|EEJ59130.1| arginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 558

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/611 (22%), Positives = 255/611 (41%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P  IA
Sbjct: 2   DFKQKVVDLVSE---QVDLPKEKIS-MLIERPKNPKMGDYAFP-AFALAKIEHKNPALIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  +I  D +  S+   G  ++N  +  + L    L+ ++     +G   +G+G    
Sbjct: 57  KNIAEKI-SDDNFASIQAVGP-YVNFAIDHAKLVNATLNDVLTEKEHFGDQKLGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAYRLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQA 240
             ++ +  +       YY   + +       +       + L   +E+ + + K +   +
Sbjct: 174 GNEEDVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             ++             D+    +LKSDGS  Y   DLA     K E  F   +YV G +
Sbjct: 282 VVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVAGGE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            +G+ K+L+ V   +    +  N+       + + G   K+S R G+ +           
Sbjct: 331 QTGHFKQLKQVLKKMGYDWSD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDQVLKDAVS 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           + V  +VG  +V F  L     +  DFD  +V  + + +   YV
Sbjct: 388 LAEQQIEEKNPNLSNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     ++  D    N        D     +   LA++P ++E A+ 
Sbjct: 447 QYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  DL+  F+ ++++ R       +   + +L   RL LV A + ++   L
Sbjct: 496 KFEPSIIAKYALDLSKKFNKYYANVR-------ILDEDDQL-NARLALVQATSIVLTEAL 547

Query: 575 NIIGVESPNEM 585
            ++GV +P EM
Sbjct: 548 RLLGVNAPKEM 558


>gi|258508781|ref|YP_003171532.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148708|emb|CAR87681.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650087|dbj|BAI42249.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 560

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 242/611 (39%), Gaps = 83/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   L  +      E  I    ++E P+    G  +      L++ L   P  IA
Sbjct: 2   DFKELVVKALVPVLDGQLDEAAITA--LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +VA+I   P  + V   G G++N YL   S+  ++L +I  SG  +G   +G+G    
Sbjct: 59  SDLVAKIDASP-FEQVKAVG-GYVNFYLDKISFAHEVLKAIAQSGEHFGDAKLGEGNVP- 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+ LA+++   GY   +  ++ D G Q   L ++   W
Sbjct: 116 IDMSSPNIAKPMSMGHLRSTVIGNALANILQKVGYSPIKINHLGDWGTQFGKLIVAYKKW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVY-LKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             +  +  +       YY   + +     EL D+  +        +++ + + + +   +
Sbjct: 176 GSEADVKADPIKNLLQYYVKFHEVAETDPELEDEARAWFKRLEDGDKEAITLWRWFRTVS 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  ++      +  ++  L  +  +         S+  +
Sbjct: 236 LAEFNRI-YKILGVDFDSYNGEAFYN----DKMDRVVKTLEDKHLL-------KTSQGAE 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
             D+ +  L              + KSDG+  Y   DLA    + E   F   +YV+G++
Sbjct: 284 IVDLSKYNL----------NPALIKKSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNE 333

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
              + ++L+AV   +  + A     +   +         K+S R G+ I           
Sbjct: 334 QREHFQQLKAVLLEMGYEWANDIHHIPFGLITANGK---KLSTRRGNIILLEKVLKDAVG 390

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  EVG  +V F  L  +  +  DF+  +V     E    YV
Sbjct: 391 LAQQQIDEKHPDLPNAEKVAHEVGVGAVIFHDLKNERLDNFDFNLEEVVRFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR  SI R+A                 P+ +  D +   ++  L +YP ++  A  
Sbjct: 450 QYTNARAHSILRKANIAP------------APEVALSDPAAWDVLRALGDYPSIVVRAAK 497

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y   LA  F+ ++++ +       V   + +L   RL +V A   ++ + L
Sbjct: 498 EYEPSVIAKYALRLAKAFNKYYANVK-------VLVEDSEL-PARLAMVSATTQVLENAL 549

Query: 575 NIIGVESPNEM 585
           +++GV +P EM
Sbjct: 550 HLLGVAAPEEM 560


>gi|168182924|ref|ZP_02617588.1| arginine--tRNA ligase [Clostridium botulinum Bf]
 gi|182674025|gb|EDT85986.1| arginine--tRNA ligase [Clostridium botulinum Bf]
          Length = 563

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/610 (19%), Positives = 238/610 (39%), Gaps = 78/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH     +G+ L  +++F GY      ++ D G Q   L  S + R
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQFGKLI-SAYRR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +          + E     V      ++  +      LNF   K L    +   +   + 
Sbjct: 174 WVDEEALEKDAIGELLRIYVKFHEEAEKDPELEKEARLNF---KRLEEGSEEETELWNRF 230

Query: 245 IRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               LK  N  +D+   + D   G+      +  ++  +  +G + +       S   + 
Sbjct: 231 KDLSLKEFNKVYDMLGIKFDSLAGESFYSDKMDAVVQEIDDKGLLVD-------SNGAKV 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             +D   +              + KSDG+  Y   DLA    + +   F   IYV+G+  
Sbjct: 284 VMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYVVGTPQ 333

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + K++      +    A     +   +    +    K+S R GD + L  ++++    
Sbjct: 334 ALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLNQSVEE 390

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +G  +V F  L       + FD+ ++     E    YV+
Sbjct: 391 TLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-TGPYVE 449

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y+YAR +SI R+A ++  + D+                 E +L   L  +   I NA   
Sbjct: 450 YSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIMNAIDK 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I + LN
Sbjct: 500 LEPAMVTRYVIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVIKNALN 553

Query: 576 IIGVESPNEM 585
           ++G++   EM
Sbjct: 554 LLGIDVVEEM 563


>gi|20088942|ref|NP_615017.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|23822191|sp|Q8TUM3|SYR_METAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19913789|gb|AAM03497.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 567

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/611 (22%), Positives = 260/611 (42%), Gaps = 76/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  ++  + LKE   K+  E +    +  E     +H  L++  A  L+     +P  +A
Sbjct: 2   ELKAQATSILKEAILKVGFEVED-SELQFET---SSHADLASRVAFRLASIHKQNPKELA 57

Query: 66  ELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
             IV+ I       +  V  AG  +IN      Y+ + ++++     ++G        ++
Sbjct: 58  SRIVSAIEIPEGSYIGEVSAAGP-YINFLAGRHYMDETVTAVREEKEKFGCGAPKD--RI 114

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E  SANP GP+HVGH R +++GDTLA ++  +GY+V  +YY+ND G QI  ++ +   
Sbjct: 115 LLEHTSANPNGPLHVGHIRNSIIGDTLARILRRAGYDVEVQYYVNDMGRQIAVVSWACER 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAM 241
                   +D+ + + Y           +   K    L+   E   L  ++ +  +V   
Sbjct: 175 FELDLSRKSDAAIADVYIKANVELDKNPDYVKKI-DALMEKVEVGDLQTIERFDKAVSLA 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  I++ L  LN+ HD F++E  F +     + DI++ +   G                +
Sbjct: 234 IAGIKETLLRLNVVHDKFVNESRFLK--SGEVHDIVERIKATG----------------R 275

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            + D+  L+   +  G +    + +S+G+  Y   DLAY + K  +  D +I V G+DH 
Sbjct: 276 TETDKGALVVDLSDYGFEKTLVIQRSNGTSLYTTRDLAYHEWKAGQ-ADRIIDVFGADHK 334

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------- 413
               +L A   A+  K+    V++ E V L        MS R G FI+   +        
Sbjct: 335 LISGQLRATLNAIGIKEP--EVVIFEFVSLPEG----SMSTRRGQFISADDLFDRVTEAA 388

Query: 414 -------------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                               + VG  +VR+ ++     +   F++ +  +  K+    Y+
Sbjct: 389 FEQVESRRPETSTEFKKQVAEMVGIGAVRYDIVRVSPEKSTVFNWKEALDFEKQG-APYI 447

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY++AR  SI  +AKD     +    P   I      + SE+ LI  +A +  +I+    
Sbjct: 448 QYSHARACSILEKAKD-----EAAWDPAEEITPSLLVEDSEIDLIKKMAMFDSIIDLGAR 502

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P+ LA Y  +LA  F+  +        +  + A + K+   RL LV     ++ + L
Sbjct: 503 ELKPHVLAIYARELADSFNQFY------RFVPVIAAEDEKVRASRLALVDCARIVLANSL 556

Query: 575 NIIGVESPNEM 585
           + +G+ +P  M
Sbjct: 557 DTLGIGAPESM 567


>gi|297201498|ref|ZP_06918895.1| arginyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197716790|gb|EDY60824.1| arginyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 584

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 125/618 (20%), Positives = 225/618 (36%), Gaps = 69/618 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      S  +   L        + +   D ++    R         N  + L++    +
Sbjct: 1   MAPVTSLSDAVNQQLTSAISA-SLPETSADPLL----RRSDRADFQANGILALAKKAKAN 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +V+RI     +  V ++G GF+N+ L+   + + L++    G   G  L  + 
Sbjct: 56  PRDLATQVVSRITTGDVIKDVEVSGPGFLNITLTDKAITENLAARYEDGDRLGVPLKDEP 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I++   N    MHVGH R AV+GD L  ++ F+G +    ++I D G Q   L   
Sbjct: 116 GTTVIDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFTGEKTIGRHHIGDWGTQFGMLIQY 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +    ++ D           +     L   Y +  + F  ++         V A
Sbjct: 176 LIENPGELAPPDEVDG----------EQAMSNLNRVYKASRVVFDSDEEFKERARKRVVA 225

Query: 241 MMKIIRDDLKALNIQHD---IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +    ++ L+      D   ++     F + D     D I   +             +  
Sbjct: 226 LQSGDKETLELWQQFVDESKVYFY-SVFEKLDMEIRDDEIVGESAYNEGMPETARLLEEM 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                      + F      DD   PL+  K+DG + Y A+DL   + +  +     ++Y
Sbjct: 285 GVAVRSEGALVVFFDEIRGKDDQPVPLIVQKADGGFGYAASDLTAIRNRVTDLHATTLLY 344

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+    S + K +   A         +    +     L  DG P K   R G+ + L  +
Sbjct: 345 VVDVRQSLHFKMVFEAARRAGWLSDGVTAHNMGYGTVLGADGKPFK--TREGETVKLEDL 402

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +DE                           VG  +V++  L    +    FD  ++   +
Sbjct: 403 LDEAVQRAAEVVREKAQDLTEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLN 462

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            +  V Y+QYAYAR +SI R+A ++ P              E E   +E  L +HL  + 
Sbjct: 463 GDTSV-YLQYAYARIQSILRKAGEVRP----------AARPELELADAERALGLHLDAFG 511

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +  A     P+KLA YLY LAS++   +           ++A+       RL L    
Sbjct: 512 STVFEAAAEYAPHKLAAYLYQLASLYTSFYDKC------PVLKADTPAQVENRLFLCDLT 565

Query: 567 ASIINSGLNIIGVESPNE 584
           A  ++ G+ ++G+ +P  
Sbjct: 566 ARTLHQGMALLGIRTPER 583


>gi|229074894|ref|ZP_04207903.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228708231|gb|EEL60395.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 562

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 235/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + ++LD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQMLD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   EL       W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVKDDEELKEEG-RAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +     FD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVGLE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAID 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++P+VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|187933796|ref|YP_001886751.1| arginyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721949|gb|ACD23170.1| arginine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 563

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/614 (21%), Positives = 243/614 (39%), Gaps = 86/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++   +KE    + ++   +++ +IE P     G  +      LS+ +   P  IA
Sbjct: 2   DYKNKIAQLIKE---HVDLDVNAIEK-LIEIPPKSEMGDYAFP-CFQLSKVMRKAPNMIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +   I  +   + +   G  ++N ++    +    ++ I+  G  YG + IG G  + 
Sbjct: 57  ETLKDAINKEG-FERIENLGP-YLNFFVDKGVFAENTINKILKDGDNYGESNIGDGKTIC 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P HVGH     +G++L  +    GY+V    ++ D G Q   L  +   W
Sbjct: 115 VEYSSPNIAKPFHVGHLFTTAIGNSLYKMFKKEGYDVVGLNHLGDWGTQFGKLISAYNRW 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
             ++AL       P      +Y+K       +      L      +   ++  D   QA+
Sbjct: 175 VDEEALEKA----PIDELLRIYVKFHD----EAEKDPSLEDEGRMYFKKLETGDPEAQAL 226

Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
            K  RD  LK     +DI   + D   G+      +  +++ L  +G + E       S 
Sbjct: 227 WKRFRDLSLKEFERVYDILGVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SN 279

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             Q   +D   +              +LK DG+  Y   DLA    + +   F   IYV+
Sbjct: 280 GAQVVMLDDYNM----------PPCIVLKGDGASIYATRDLAAAMYRKKTYDFYKSIYVV 329

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           GS  + + K++  V      + A   V +   +  + D    K+S R G+ + L  ++ E
Sbjct: 330 GSPQALHFKQVFKVLELAGHEWANDCVHVGFGLVKFADR---KLSTRKGEVVLLDDLIRE 386

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    +G  ++ F  L     + + FD+ ++     E   
Sbjct: 387 SVEKTLEVINEKNPNLENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGE-TG 445

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY+YAR  SI  +A++I   +D+                 E +L+  LA +   I+ 
Sbjct: 446 PYVQYSYARANSIISRAENISSKVDYSKLSSK----------EEFELVKVLANFNNQIKL 495

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           AT   EP  L  Y+ ++A  F+  ++          +  ++  L   RL LV +   +I 
Sbjct: 496 ATDKLEPSILTRYVIEVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIK 549

Query: 572 SGLNIIGVESPNEM 585
           +GL ++G++   +M
Sbjct: 550 NGLELLGIDVVEKM 563


>gi|282889548|ref|ZP_06298090.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500561|gb|EFB42838.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 586

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/622 (22%), Positives = 230/622 (36%), Gaps = 86/622 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S + +  +     +      +   + I +      GH   N+AM L++ LG  P  IA 
Sbjct: 8   LSQKFQTAILSAFPEWDPNTPLP--LEISQSTQAQFGHYQCNSAMKLAKVLGAKPRDIAT 65

Query: 67  LIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I+  + ++ +    ++ + IAG GFIN+ L P+YL + L  I++        L     K
Sbjct: 66  RIIEHVDVNLEGIRLIEKMEIAGPGFINITLDPAYLSQKLHRILLD-SHLDIELPQHKQK 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +EF S N    +HVGH R  ++GD+LA L  F G++V R  +I D G     L   + 
Sbjct: 125 IIVEFSSPNTAKELHVGHLRSTIIGDSLARLFEFLGHDVLRLNHIGDWGTAFGMLIAYMK 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            +    L   +             K   + L   Y      F  +          V A+ 
Sbjct: 185 QKTPHVLDGTE-------------KTDLQHLVQWYKKSKERFDSDADFKKTSQLEVVALQ 231

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQK 301
                 LKA  I  DI        R     I D++D  +  +G  Y   +        + 
Sbjct: 232 GGDPAALKAWEIICDI-------SRKAYQEIYDLLDVKIIERGESYYNPMLADTVADLEA 284

Query: 302 CDM----DRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMI 353
             +    D  + +F        G  +   + KSDG Y Y   D+A  + +  E   D +I
Sbjct: 285 KGLVTLSDGAKCIFLEGFQNREGASLPLMVQKSDGGYNYDTTDMAAIRQRTLEEKADRII 344

Query: 354 YVMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIKMSKRAGDF--- 407
           YV  +  S + + +   A         K +++ +   LV L  DG   K   R+G+    
Sbjct: 345 YVTDAGQSLHFQMIFQAAEKAHYLDASKVRVDHVPFGLV-LGSDGK--KFRTRSGETERL 401

Query: 408 ------------------------ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                                        +   +G  +V++  L    +    F + ++ 
Sbjct: 402 IDLLLAAVKHADQLLIERSPEMPKEEREKLAKTLGIAAVKYADLACNRTGDYTFSYERML 461

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            + + N   ++ YAY R   I R+       ++  L    +         SE+ L VHLA
Sbjct: 462 -RFEGNTAAFLMYAYVRVAGIKRK-------INPALKIEELKDPIVLEHPSEISLAVHLA 513

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +E       P +L  YLY LA  F+  +   R                  RLQ+ 
Sbjct: 514 QFEEALEQVASDLLPNRLTEYLYGLAEKFNAFFRDCR---------VEGSPQQNSRLQIC 564

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA  +  GL+I+GV++   M
Sbjct: 565 EIVAKTMKQGLSILGVQTVERM 586


>gi|298673986|ref|YP_003725736.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298286974|gb|ADI72940.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 563

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/611 (22%), Positives = 258/611 (42%), Gaps = 80/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +   ++++ L +    +  E   +D + +E      H  +++N A  L+     +P  IA
Sbjct: 2   ELKKQVESILNDAVVSLGYE---IDSLYVEA---SQHSDVASNVAFRLASKYRQNPKDIA 55

Query: 66  ELIV--ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           E I   A I     +  + + G  ++N +    YL   +  I      +  N       +
Sbjct: 56  EKIGNTAVIGDKSYIGKMEVTGP-YLNFWAKRDYLDDTVLKIRKEKENFASN--FSSGDI 112

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E  SANP GP+HVGH R +V+GDTL+ ++  +GY V  +YY+ND G QI  ++  +  
Sbjct: 113 ILEHTSANPNGPLHVGHIRNSVIGDTLSRVLKHAGYNVRTQYYVNDIGRQIAIVSWGLKN 172

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--ELLNFPEEKWLPIVKDYSVQAM 241
                   +D  + + Y                  S  +++   +E  + I  D SV+  
Sbjct: 173 FGFDESKKSDHAIADLYIKSNQELEKDTSKVQDIDSLMQMVENGDEDTIKIF-DESVRYS 231

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  +  LK LN+ HD F+ E +F R     +  I++ L   G+                
Sbjct: 232 LEGTKQTLKTLNVSHDEFVYESEFIRN--GSVSKIVNELKSTGHT--------------- 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            +MD   L+   +  G +    + +SDG+  Y   DLAY + K     D +I ++G+DH 
Sbjct: 275 -EMDNGALVVDLSGYGFEKQLVIQRSDGTSLYTTRDLAYHEQKSAES-DRVIDILGADHK 332

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH--------- 412
               +L+A    +   K +  V++ E V L        MS R G FIT            
Sbjct: 333 LVSSQLKATMNLL--DKKEPEVVIFEFVSLPEG----SMSTRKGKFITADDVFDKVKSQA 386

Query: 413 ------------------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             + D+VG  +VR+ ++     +   FD+ K  +  K+    Y+
Sbjct: 387 YKEVDKRRPDMPADFKKEISDQVGMGAVRYDIISVSPEKSTVFDWKKALDFEKQG-GPYI 445

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY++AR  +I ++A+  +        P + +      +  E+ LI  +A++ ++I+ +  
Sbjct: 446 QYSHARACNILKKAETFWN-------PEDAVNPSVLVEDDEVALIKKMAKFDQMIDQSAK 498

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P+ +A Y  +LA  F+  +        +    A + ++   RL LV     ++ + L
Sbjct: 499 ELKPHTVATYARELADDFNQFY------RYVPVNSAEDDEVRNARLGLVDCARIMLANTL 552

Query: 575 NIIGVESPNEM 585
            I+G+ +P  M
Sbjct: 553 YILGISAPESM 563


>gi|326778607|ref|ZP_08237872.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658940|gb|EGE43786.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 590

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/628 (21%), Positives = 232/628 (36%), Gaps = 83/628 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L+  L +       +    D ++    R         N  + L++ L  +
Sbjct: 1   MASVPSLASTLQQQLADALTAALPDAGAADPLL----RRSDRADFQANGILALAKKLKGN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGK 119
           P  +A  + A +     +  + ++G GF+N+ L+   + + L++    G    G  L   
Sbjct: 57  PRELAAQVTAALPAGGLIKDIEVSGPGFLNVTLTDRAIVETLAARAADGEGRLGVPLKDD 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                I++   N    MHVGH R AV+GD +  ++ F+G  V R ++I D G Q   L  
Sbjct: 117 AGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTGENVVRRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            +       Q      D +        VY          K S  L +  EE      K  
Sbjct: 177 YLIEHPGALQHEGGPGDGEAAMSTLNRVY----------KESRALFDSDEE-----FKAR 221

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFH------RGDPSPIRDIIDNLARQGYVYEGI 290
           S   ++ +   D   L + H  F+ E   +      + D       I   +    + E  
Sbjct: 222 SRDRVVALQAGDPGTLELWH-RFVDESKIYFHSVFDKLDMEIRDPDIVGESGYNDMLEET 280

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-E 346
               +         +    +F   + G D +R    + K++G Y Y A DL+  + +  +
Sbjct: 281 CRILEETGVA-VRSEGALCVFFDDVKGPDGNRVPLIVKKTNGGYGYAATDLSAVRNRVQD 339

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAG 405
              D ++YV+ +  S + + +   A         +  V L     L +DG P K   R G
Sbjct: 340 LKADTLLYVVDARQSLHFRMVFETARRAGWLGDDVKAVQLAFGTVLGKDGKPFK--TREG 397

Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436
           + + L  ++DE                             VG  +V++  L         
Sbjct: 398 ETVRLEDLLDEAVQRATAVVRDKAEKVGLSEEEIVENGRYVGIGAVKYADLSTSAVRDYK 457

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  ++     +  V Y+QYAYAR RSI R+A D  P              E E   +E 
Sbjct: 458 FDLDQMVALHGDTSV-YLQYAYARIRSILRKAGDAVP----------AAHPELELAPAER 506

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L +HL ++  V+       EP+KLA YLY LAS     +   +          N  ++ 
Sbjct: 507 ALGLHLDQFGEVLAEVGEGYEPHKLAAYLYQLASHLTTFYDQCQVLSP-----DNAPEVV 561

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNE 584
             RL LV   A  ++ G+ ++G+ +P  
Sbjct: 562 ENRLFLVELTARTLHRGMALLGIRTPER 589


>gi|238852513|ref|ZP_04642925.1| arginine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834860|gb|EEQ27085.1| arginine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 558

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/611 (22%), Positives = 253/611 (41%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P  IA
Sbjct: 2   DFKQKVVDLVSE---QVDLPKEKI-VMLIERPKNAKMGDYAF-PAFALAKIEHKNPALIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  +I  D +  S+   G  ++N  +  + L    L+ ++     +G   +GKG    
Sbjct: 57  KDIAEKIN-DDNFTSIEAVGP-YVNFAIDHAKLVNATLNDVLTEKDHFGDQQLGKGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAYRLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQA 240
             ++ +  +       YY   + +       D       + L   +E+ + + K +   +
Sbjct: 174 GNEEDVKKDPITNLFHYYVKFHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             ++             D+    +LKSDGS  Y   DLA     K E  F   +YV G +
Sbjct: 282 VVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVAGGE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            SG+ K+L+ V   +    A  N+       + + G   K+S R G+ +           
Sbjct: 331 QSGHFKQLKQVLKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVS 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  +VG  +V F  L     +  DFD  +V  + + +   YV
Sbjct: 388 LAEQQIEEKNPNLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     ++  D    N        D     +   +A++P ++  A+ 
Sbjct: 447 QYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  DL+  F+ ++++ R       +   + +L   RL LV A + ++   L
Sbjct: 496 KFEPSIIAKYALDLSKKFNKYYANVR-------ILDEDDQL-NARLALVQATSIVLTEAL 547

Query: 575 NIIGVESPNEM 585
            ++GV +P EM
Sbjct: 548 RLLGVNAPKEM 558


>gi|322805401|emb|CBZ02965.1| arginyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 563

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/610 (19%), Positives = 237/610 (38%), Gaps = 78/610 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   +KE     ++E  ++++ +IE P     G  +      L++     P  IA
Sbjct: 2   DYKNLVAERIKE---NTELEVDLIEK-LIEIPPKKEMGDYAF-PCFQLAKTFRKAPNLIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           E +  +I  +   + V   G  ++N ++  + L K +   V+S   +YG + +G+G  V 
Sbjct: 57  EELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEKYGSSKVGEGKNVV 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH     +G  L  +++F GY      ++ D G Q   L  S + R
Sbjct: 115 VEYSSPNIAKPFHIGHLFTTAIGSALYKILSFEGYNCIGINHLGDWGTQFGKLI-SAYRR 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           +          + E     V      ++  +      LNF   K L    +   +   + 
Sbjct: 174 WVDEEALEKDAIGELLRIYVKFHEEAEKDPELEKEARLNF---KRLEEGSEEETELWNRF 230

Query: 245 IRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               LK  N  +D+   + D   G+      +  ++  +  +G + +       S   + 
Sbjct: 231 KDLSLKEFNKVYDMLGIKFDSLAGESFYSDKMDAVVQEIDDKGLLVD-------SNGAKV 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             +D   +              + KSDG+  Y   DLA    + +   F   IYV+G+  
Sbjct: 284 VMLDEYNM----------PPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYVVGTPQ 333

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + K++      +    A     +   +    +    K+S R GD + L  ++++    
Sbjct: 334 ALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK---KLSTRNGDVVFLEDLLNQSVEE 390

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                +G  +V F  L       + FD+ ++     E    YV+
Sbjct: 391 TLKIINEKNPNLKNKEDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGE-TGPYVE 449

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y+YAR +SI R+A ++  + D+                 E +L   L  +   I NA   
Sbjct: 450 YSYARGKSILRKAGELTGEADYSKLSSK----------EEFELAKLLGGFNDAIMNAIDK 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +  Y+ ++A  F+  ++          + A +  + + R++LV A   +I + LN
Sbjct: 500 LEPAMVTRYIIEVAKAFNKFYNAH------GILNAEDNDVKLARVKLVEATCQVIKNALN 553

Query: 576 IIGVESPNEM 585
           ++G++   EM
Sbjct: 554 LLGIDVVEEM 563


>gi|300362212|ref|ZP_07058389.1| arginine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354831|gb|EFJ70702.1| arginine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 564

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/614 (22%), Positives = 254/614 (41%), Gaps = 85/614 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L  DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P 
Sbjct: 5   LSVDFKQKVVDLVSE---QVDLPKEKI-AMLIERPKNAKMGDYAF-PAFALAKIEHKNPA 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGT 121
            IA+ I  +I  D +  S+   G  ++N  +  + L    L+ ++     +G   +G+G 
Sbjct: 60  LIAKDIAEKI-SDDNFTSIQAVGP-YVNFAIDHAKLVNATLNDVLTEKDHFGDQQLGEGN 117

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  + 
Sbjct: 118 VP-IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAY 176

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYS 237
             W  ++ +  +       YY   + +       D       + L   +E+ + + K + 
Sbjct: 177 RLWGNEEDVKKDPITNLFHYYVKFHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWFR 236

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             ++ +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+
Sbjct: 237 EVSLQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SR 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVM 356
             Q  ++             D+    +LKSDGS  Y   DLA     K E  F   +YV 
Sbjct: 285 GAQVVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVA 333

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G + SG+ K+L+ V   +    A  N+       + + G   K+S R G+ +        
Sbjct: 334 GGEQSGHFKQLKQVLKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKD 390

Query: 409 -----------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                V  +VG  +V F  L     +  DFD  +V  + + +  
Sbjct: 391 AVSLAEQQIEEKNPNLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTG 449

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY  AR +SI R+A     ++  D    N        D     +   LA++P ++  
Sbjct: 450 PYVQYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKALADFPAIVAK 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A+   EP  +A Y  DL+  F+ ++++ R       +   + +L   RL LV A + ++ 
Sbjct: 499 ASEKFEPSIIAKYALDLSKKFNKYYANVR-------ILDEDDQL-NARLALVQATSIVLT 550

Query: 572 SGLNIIGVESPNEM 585
             L ++GV +P EM
Sbjct: 551 EALRLLGVNAPKEM 564


>gi|304313810|ref|YP_003848957.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587269|gb|ADL57644.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 560

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/614 (22%), Positives = 261/614 (42%), Gaps = 85/614 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    +  ++ + E   K+++   +   I +E P +   G L+   A  L+  L   P+
Sbjct: 1   MFRYIENSARDSITEALEKLQLP--VPSEIKLEEPPNPQLGDLACTVAFELAGELKRPPM 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I   I++ I+     ++V   G  +IN ++    L   L  I+        +   +G +
Sbjct: 59  EITSDIMSVIETPEIFEAVESKGP-YINFFVDYGKLSGKLLEIIDDD---YGSHPERGER 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +E  SANP GP+H+GH R A++GD+LA ++  +GY+V  +YY+ND G QI  +   + 
Sbjct: 115 IILEHTSANPNGPLHIGHIRNAIIGDSLARILRKAGYQVETQYYVNDMGRQIAMIVWGLL 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYS 237
               Q   ++       +  G     V ++L +     +   ELL   E           
Sbjct: 175 --NLQKNLDDYPGDKRDHRVGRLYLEVNQKLKEDPGIKEEVDELLRQYEAGENEDTFREV 232

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V+  +  +++ ++ L++ HD F+ E +  R     + ++I++L + G   E  +      
Sbjct: 233 VEYCLDGMKETMQRLHVHHDRFVWEGELVR--DGTVGEVIESLRKTGLTRENEV------ 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                      L       G + +  L +SDG+  Y   D+AY   K   G D +I V+G
Sbjct: 285 -----------LYLDLEDFGIEKELVLTRSDGTSLYSTRDIAYHLQKSREG-DILIDVLG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           SDH    +++      +  KK    V+  E + L        MS R G FI++  ++DE 
Sbjct: 333 SDHKLAAEQVGIAVDLLGGKKP--EVIFYEFITLPEG----SMSTRRGVFISVDELMDEA 386

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    +G+ ++R+ +      + + F + +     +    
Sbjct: 387 HKRALEEVEKRRELPDDVADEIAEAIGNGAIRYYIARLSPEKHIVFRWDEALSFERG--C 444

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+AR   + ++A     +   D +           +  E +L+  LA +P V+E 
Sbjct: 445 ASIQYAHARACKLLKKASFNGDEDIEDTWKP---------ENDEKELVRLLARFPVVVEE 495

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A +A+  + +A Y+ DLA+ F+  +   R  P +        +    RL+LV +V  +I 
Sbjct: 496 AAMARRVHPVAQYVQDLANAFNSFY---RSTPVIG------SEFEGARLRLVDSVRIVIR 546

Query: 572 SGLNIIGVESPNEM 585
           + L ++G+ +P  M
Sbjct: 547 NALGLLGIHAPETM 560


>gi|325571092|ref|ZP_08146664.1| arginine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156177|gb|EGC68363.1| arginine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 563

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 117/607 (19%), Positives = 236/607 (38%), Gaps = 80/607 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +   ++  E   ++++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAQAIHQVVKEDLSIEQVQQLLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFV 128
            +I      + + + G  ++N ++    +   +   ++     +G   IG    V I+  
Sbjct: 63  EKIDQ-ASFEKIEVVGP-YLNFFMDKKAISAHVLELVLKEKNHFGDQTIGNQQAVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
           A+       P      +Y+        DK     L      W   ++D    ++      
Sbjct: 181 AVKAE----PINELLRLYVDFHEAAETDK----QLEDDARAWFKKLEDGDQEAMDLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + LK  N  +D+     D   G+      + ++++ L  +  + E        +  + 
Sbjct: 233 RDESLKEFNKIYDMLEVSFDSLNGEAFYNDKMTEVVELLEEKHLLKE-------DQGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   D+A    +     F   +YV+G++ 
Sbjct: 286 VDLAAYDL----------NPALIRKSDGATLYITRDMAAALYRKRTYNFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQI----------------------NVLLCELVRLYRDGMPI 398
           S + K+L+AV   +  + A                         VLL E++    D    
Sbjct: 336 SYHFKQLKAVLKEMGFEWADDMTHVPFGLITKDGKKLSTRKGKIVLLEEVLNEAIDSAKE 395

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           +++++         V  +VG  +V F  L        DF   +V     E    YVQY++
Sbjct: 396 QITEKNPTLENKEEVAKQVGVGAVVFHDLKNDRLNNFDFTLEEVVRFEGE-TGPYVQYSH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI  +A           F    +   +  D    ++I  +  YP  +  A    EP
Sbjct: 455 ARAMSILEKAN----------FDPAAVSSLALADAESWEVIKLIQRYPETVMQAAEKYEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +   LA  F+ ++++ +       + A + +    RL LV+AV +++   L ++G
Sbjct: 505 SVIAKHAIKLAQAFNKYYANVK-------ILAEDTE-KDARLALVYAVTTLLKEDLRLLG 556

Query: 579 VESPNEM 585
           + +P++M
Sbjct: 557 LHAPDKM 563


>gi|88858297|ref|ZP_01132939.1| arginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819914|gb|EAR29727.1| arginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 580

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 240/617 (38%), Gaps = 69/617 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  +  +      E        + +      G    N AM  ++ L  +
Sbjct: 1   MNIRQLL---VQRAVAAMVAAGLPED---TNPAVTQSTRAQFGDYQINGAMGAAKKLKAN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ I+  + +D     + IAG GFIN++L P +L   L +      + G  +  K 
Sbjct: 55  PRELAQKIIDHLDLDDVAAQLEIAGPGFINIHLKPEFLAAQLVA-ANQDEKLGVQVHAKA 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +++ S N    MHVGH R  ++GD +   + F G  V R+ ++ D G Q   L   
Sbjct: 114 QKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVVRQNHMGDWGTQFGMLIAH 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     Q +      L +               + K   +   F ++    +VK  S  A
Sbjct: 174 LEDLLNQGIDLEAVALAD--------LESFYRDSKKRFDDEEGFADKARDYVVKLQSGDA 225

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                 + L  L I   +  S + +H+ + +  +D I   +        I+   K+K   
Sbjct: 226 HC----EKLWRLFINTSVKHSSEVYHKLNVTLTQDDIMAESAYNSELHNIIALLKAKNIA 281

Query: 301 KCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
             +    Q++F    +   G+     + KS G + Y   DLA    +  +   D ++  +
Sbjct: 282 -VESQGAQVVFLEELANKEGEPSAFIVQKSGGGFLYATTDLAACDYRSNKLQADRILIFV 340

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S +  ++E  A      + + +   C     +  DG P K   R+GD + L  +++
Sbjct: 341 DARQSLHFSQVELTARKAGLLRDETSYEFCPFGTMMGEDGKPFK--TRSGDTVKLADLLE 398

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    F++  +    + 
Sbjct: 399 EAITRAQAKLAERESDLSEQERAEIARKVGIGAVKYADLSKNRTSDYIFNWDSMLSF-EG 457

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               Y+QYAY R RS+FR+A      L+  +      PQE       LQL   L +   +
Sbjct: 458 ATAPYLQYAYMRVRSLFRKANIDVSTLNAAITIAE--PQEKALALKLLQLEEVLDQ---M 512

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A     P+ L  YLY+LAS++   +      P L+     + +L   RL L + VA+
Sbjct: 513 INEA----TPHVLCAYLYELASLYMTFYEAC---PVLK--DDISTQLRDSRLVLCNLVAN 563

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL ++G+E   +M
Sbjct: 564 TLQQGLGLLGIEVMEQM 580


>gi|228997281|ref|ZP_04156904.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228762476|gb|EEM11400.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 562

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/607 (22%), Positives = 237/607 (39%), Gaps = 87/607 (14%)

Query: 15  LKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           L +   +I   +  L++I  +IE P+    G  +    M L++     P  IA+ I  ++
Sbjct: 7   LAKSLFEILKSELSLEQITGLIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKL 65

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
             +     V   G  ++N++ +   +    L +I+V   EYG+   G+   V I++ S N
Sbjct: 66  N-NSFFTKVKAVGP-YVNVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPN 123

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +      + L  
Sbjct: 124 IAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKWGNEELVK 183

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIR-DD 248
            D   P      +Y+     E   +Y    L      W   ++D   +A  +    R + 
Sbjct: 184 ED---PIRELFKLYVHF--HEEVKEYPE--LEEEGRAWFKKLEDGDEEAVFLWNWFRHES 236

Query: 249 LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           LK  +  +++   E    +G+      + D +D L  +G + E                D
Sbjct: 237 LKEFSRIYELLGVEFTNFQGEAFYNDKMGDFVDILEEKGLLEES---------------D 281

Query: 306 RKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
             Q++    +  +D+   L+ KSDG+  Y   DL     +     FD  +YV+G++ S +
Sbjct: 282 GAQVV---NLEKEDMPPCLIKKSDGATLYATRDLTAALYRQNTYEFDKALYVVGAEQSLH 338

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG------------------ 405
             +   V   +        +       + +DG   KMS R G                  
Sbjct: 339 FTQFFTVLKKLGYNWVD-GMAHVPFGLILKDGK--KMSTRKGKVVLLEEVLEEAITLAER 395

Query: 406 -------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                  D      V  +VG  +V F  L  +    ++F   K+ +   E    YVQY +
Sbjct: 396 NIEEKNPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGE-TGPYVQYTH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI R+    F    F L            D      I  L  +P+V+E A    EP
Sbjct: 455 ARACSILRKENAEFETEAFQLN-----------DDHSWSTIKLLNRFPQVVETAFFKNEP 503

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A YL D+A  F+ ++ + R       +   +++    RL LV+ V  ++  GL ++G
Sbjct: 504 SHIAKYLLDVAQAFNKYYGNVR-------ILEEDKE-KESRLALVYVVTIVLKEGLRLLG 555

Query: 579 VESPNEM 585
           + +P EM
Sbjct: 556 MGAPEEM 562


>gi|251778024|ref|ZP_04820944.1| arginine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082339|gb|EES48229.1| arginine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 563

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 135/615 (21%), Positives = 242/615 (39%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D+ +++   +K+ +D  I   +K     +IE P     G  +      LS+ +   P  I
Sbjct: 2   DYKNKIAQLIKQHVDLDIDAIEK-----LIEIPPKSEMGDYAFP-CFQLSKVMRKAPNMI 55

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE +   I  D   + +   G  ++N ++    +    ++ I+  G  YG + IG+G  V
Sbjct: 56  AETLKDAINKDG-FERIENLGP-YLNFFVDKGVFAENTINKILKDGDSYGESNIGEGKTV 113

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-F 182
            +E+ S N   P HVGH     +G++L  +    GY+V    ++ D G Q   L  +   
Sbjct: 114 CVEYSSPNIAKPFHVGHLFTTAIGNSLYKMFKKEGYDVVGLNHLGDWGTQFGKLISAYNR 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQA 240
           W  + AL       P      +Y+K       +      L      +   ++  D   QA
Sbjct: 174 WVDEDALEKA----PIDELLRIYVKFHD----EAEKDPSLEDEGRMYFKKLETGDAEAQA 225

Query: 241 MMKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKS 296
           + K  RD  LK     +DI   + D   G+      +  +++ L  +G + E       S
Sbjct: 226 LWKRFRDLSLKEFERVYDILGVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------S 278

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
              Q   +D   +              +LK DG+  Y   DLA    + +   F   IYV
Sbjct: 279 NGAQVVMLDDYNM----------PPCIVLKGDGASIYATRDLAAAMYRKKTYDFYKSIYV 328

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +GS  + + K++  V      + A   V +   +  + D    K+S R G+ + L  ++ 
Sbjct: 329 VGSPQALHFKQVFKVLELAGHEWANDCVHVGFGLVKFADR---KLSTRKGEVVLLDDLIR 385

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         +G  ++ F  L     + + FD+ ++     E  
Sbjct: 386 ESVEKTLEVINEKNPDLENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGE-T 444

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY+YAR  SI  +A++I   +D+                 E +L+  LA +   I+
Sbjct: 445 GPYVQYSYARANSIISRAENISSKVDYSKLSSK----------EEFELVKVLANFNNQIK 494

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            AT   EP  L  Y+ ++A  F+  ++          +  ++  L   RL LV +   +I
Sbjct: 495 LATDKLEPSILTRYVIEVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVI 548

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++G++   +M
Sbjct: 549 KNGLELLGIDVVEKM 563


>gi|225375605|ref|ZP_03752826.1| hypothetical protein ROSEINA2194_01230 [Roseburia inulinivorans DSM
           16841]
 gi|225212584|gb|EEG94938.1| hypothetical protein ROSEINA2194_01230 [Roseburia inulinivorans DSM
           16841]
          Length = 595

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 120/631 (19%), Positives = 234/631 (37%), Gaps = 85/631 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  + + + +   +   + K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKILDLITDEVTKAFTECGYDAKYAKVTLSNRPDLCE---YQCNGAMAAAKEYKKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ +V ++  +P          GF+NL +  +YL   ++ +      +G         +
Sbjct: 58  IADEVVEKLAANPIFAMAESVKPGFLNLKIDEAYLADYVAKMQEDEGRFGCEKTEAPKTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G+ V  + ++ D G Q+  +   +  
Sbjct: 118 MIDYGGPNVAKPLHVGHLRSAIIGESVKRIGKFMGHNVIGDVHLGDWGLQMGLIITELKL 177

Query: 184 RYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DY 236
           R  + +Y +D+   + PE     +         A K S E   + E       +      
Sbjct: 178 RRPELVYFDDAHTGEYPEEAPFTISELEEIYPTASKKSKEDEAYKEAAMQATFELQHGKR 237

Query: 237 SVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
             QA++K I        + +   LN+  +++  E D        I D++  +   G+ Y 
Sbjct: 238 GYQALLKHILNVSVTDLKRNYANLNVSFELWKGESDAQPY----IPDMVQKMKDDGFAY- 292

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ER 347
                  S      D+         T   +     +LKSDG+  Y   DLA    +  + 
Sbjct: 293 ------ISDGALVVDVKE------DTDTKEIPPCMILKSDGASLYNTTDLATMVWRMKDY 340

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGD 406
             D +IYV+      Y  ++   A      K +  +  L       +DG P K   R G 
Sbjct: 341 NPDEIIYVVDKRQELYFTQVFRCARKTGIVKPETELKFLGFGTMNGKDGRPFK--TRDGG 398

Query: 407 FITLRHVV--------------------------------DEVGSDSVRFMMLWRKNSEL 434
            + L H++                                  V   ++++  L  + S+ 
Sbjct: 399 VMRLEHLISGINEEMLAKIQENQKTKENLGISTEEAENTAKMVALAAIKYGDLSNQASKD 458

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             FD  +     + N   Y+ Y   R +SI  +   +  D    +        ES    S
Sbjct: 459 YIFDIDRFTSF-EGNTGPYILYTIVRIKSILNKYHGLGKDDSGAVI-------ESAHSKS 510

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++ L+++  V+E+A     P+K+  Y+YDLA+ F+  +         + +   N  
Sbjct: 511 EKDLMLELSKFNAVMESAFEETAPHKICSYIYDLANAFNSFYH------GTKIMSEENET 564

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    ++L+    S++ + ++++G  +P  M
Sbjct: 565 VQKSYIRLLELTKSVLETCIDVLGFSAPERM 595


>gi|194745067|ref|XP_001955014.1| GF16459 [Drosophila ananassae]
 gi|190628051|gb|EDV43575.1| GF16459 [Drosophila ananassae]
          Length = 666

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 118/586 (20%), Positives = 228/586 (38%), Gaps = 75/586 (12%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
              G    N AM L++ L        P  IA  I     + P ++ + +AG GF+N++LS
Sbjct: 114 AKFGDYQCNNAMKLAKQLKEKGINKSPGDIATEIQRNCPVSPLIEKLEVAGAGFVNVFLS 173

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            +Y  + LS ++ +G+   +       +V I+F S N    MHVGH R  ++G+++  L+
Sbjct: 174 KNYASQALSGLLRNGV---KPPPVPKRRVLIDFSSPNIAKQMHVGHLRSTIIGESICRLL 230

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +  R+   L  +    DL   Y          +E
Sbjct: 231 EFLQHDVVRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGDLQVFYKESKKRFDEDEE 290

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +  S +++    +   I    + Q +  + R + + +  + D+ I E    F++   
Sbjct: 291 FKKRAYSRVVSLQSGEPNSI---KAWQLICDVSRKEFQTIYNRLDVSIQERGESFYQ--- 344

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  +++ L ++  +              + D  R+ +    +  G  +   ++KSDG 
Sbjct: 345 SRMLSVVEFLRKKNLL--------------EPDEGREIMWPDESKTG--IPLTIVKSDGG 388

Query: 331 YTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLLCE 387
           +TY  +D+A  + +  E     +IYV+ +  S +   +   A      ++       +  
Sbjct: 389 FTYDTSDMAAIRHRLEEEKCSWIIYVVDAGQSTHFNTIFKAAERCGILDRAVHRVDHVQF 448

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            V L  DG   K   R+GD + L  ++DE                             V 
Sbjct: 449 GVVLGEDGK--KFKTRSGDTVKLSDLLDEGMKRSLNQLESRGRNDVLTPQELKDAQEAVA 506

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              +++  L         F F K+ E  + N   Y+ Y Y R  SI R + + F DL   
Sbjct: 507 YSCIKYADLCHNRISDYIFSFDKMLE-DRGNTAVYLLYTYTRICSIARNSGEDFSDLAKV 565

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L   N+          E +L   L +   ++   +     + L  + Y++ +VF   +  
Sbjct: 566 LEGVNI----DLSHEKEWKLAKTLLKMHDILIKCSNELFLHFLCEFCYEVCTVFTEFYDS 621

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                + +        +   R+ L  A A+++     I+G++   +
Sbjct: 622 CYCIEKNKA--GEIIAVNRSRILLCEATAAVLRQSFFILGLKPVAK 665


>gi|262047826|ref|ZP_06020776.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260571883|gb|EEX28454.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 561

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/607 (21%), Positives = 244/607 (40%), Gaps = 74/607 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF + + + +     ++ + K+ +   +IERP++   G  +   A IL++ L  +P  IA
Sbjct: 2   DFKNEVVDLV---ASQVDLPKEKIAA-LIERPKNAKMGDYAFP-AFILAKTLHKNPAEIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I   +  D +  ++   G  ++N  +    L    L  ++     YG   IG+G    
Sbjct: 57  KNIADNLSSD-NFANIQAVGP-YVNFAIDHEKLVSSTLKDVLTEKEHYGDQKIGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  M   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTMEKVGYTPIKINYLGDYGTQFGKLIAAYKHW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +       YY   + +       D    E     E+     VK +    +  
Sbjct: 174 GNEEDVKKDPIMNLFHYYVKFHQEAEKNPELDNEGREWFKKLEDGDPEAVKLWKWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K  +   K L +  D +  E  F+      ++ +ID L  +G ++E       S+  Q 
Sbjct: 234 LKDFKRIYKELGVTFDSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            DM              +    ++KSDG+  Y   DLA  + +  E  F  M+YV+G++ 
Sbjct: 283 VDMGEG-----------ENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + +   L+ V   +    A                           L ++++        
Sbjct: 332 AQHFVELKTVLKKMGYDWADEIHHVPFGLITQGGKKLSTRKGNVVFLDQVLKDAVSLAKK 391

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++ ++  D      V  +VG  +V F  L     +  DFD  +V  + + +   YVQY  
Sbjct: 392 QIQEKNPDLADQDQVAHDVGVGAVVFHDLKNDRLDNFDFDLEEVV-RFEGDTGPYVQYTN 450

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +S+ R+A  +  +        +        D     +   LA++PR++  +    EP
Sbjct: 451 ARAQSVLRKAAAMGENPSETDLALD--------DDWAFAVAKDLADFPRIVARSAEKFEP 502

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +  DLA   + ++++ +       +   + K+   RL LV A + ++   L ++G
Sbjct: 503 SVIAKFALDLAKKLNKYYANVK-------ILTKDDKI-GARLALVQATSIVLTESLRLLG 554

Query: 579 VESPNEM 585
           V +P EM
Sbjct: 555 VNAPKEM 561


>gi|311896747|dbj|BAJ29155.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 587

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 248/617 (40%), Gaps = 84/617 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           +  ++E   ++ + + +  R  + RP    H    +N  + L++  G  P  +AE + + 
Sbjct: 12  ERAVREAMARV-LPEDLSGRDALVRP--SEHADFQSNVGLALAKEAGRPPRDLAEALRSE 68

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           +   P   +  ++G GF+NL L+   L   +++ + +    G  L   G++  I++ + N
Sbjct: 69  LAAGPF--AADVSGPGFLNLRLADRLLWAQVTARLAA-PRLGVGLPLAGSRTVIDYSAPN 125

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
               MHVGH R  V+GD+L  +++F G EV R+ ++ D G Q   L   +   + +A ++
Sbjct: 126 IAKEMHVGHLRTTVIGDSLVRVLSFLGGEVVRQNHLGDWGTQFGMLIQYL-DEHPEAGWH 184

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-----KDYSVQAMMKIIR 246
             ++  +       L  + +  A K      +F E     +V      + +  A  +++ 
Sbjct: 185 GRAEQGDAAAQVALLDTLYRA-ARKEFERDQDFVERARGRVVALQSGDEATTGAWRELVA 243

Query: 247 DDLKALNIQHD---IFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               A    +D   + ++E D   G+ +    + ++ + L   G                
Sbjct: 244 VSTAAFQQLYDRLGVLLTEAD-SAGESTYNHLLDEVAEELLHSG---------------A 287

Query: 301 KCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVM 356
             + D    +F   + G D   V   + K DG Y Y A DLA  + +  E   D ++YV+
Sbjct: 288 AVESDGALCVFFEDVTGPDGAPVPLIVRKKDGGYGYAATDLATLRHRVRELRADRILYVV 347

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S + K + A A       A +  V +     +   G P K   R G  + L  ++D
Sbjct: 348 DARQSLHFKMVFATARRAGWLPAGVEAVHVPFGTVMGPGGTPFK--TREGGTVRLAELLD 405

Query: 416 ---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                        G  +V++  L    ++   FD  ++    + 
Sbjct: 406 AAVAAAHRAVADKPHELSEAELDDVARAAGIGAVKYADLSTSRTKNYVFDIDQMVSL-QG 464

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYA+AR R++  +A+ + P  + D             + +E  LI+ L  + +V
Sbjct: 465 NTGVYLQYAHARLRTLLGKAQAVDPAPEVDPG--------LPLEPAERALILQLEGFGQV 516

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +       EP++LA YL+ LA      +           ++A+       RL L    A 
Sbjct: 517 LREVADEAEPHRLAGYLFALAKALTEFYGSC------PVLKADTPARRANRLALCRLTAD 570

Query: 569 IINSGLNIIGVESPNEM 585
            +  GL+++G+ +P  M
Sbjct: 571 TLAQGLDLLGLRAPERM 587


>gi|224068192|ref|XP_002189938.1| PREDICTED: arginyl-tRNA synthetase [Taeniopygia guttata]
          Length = 625

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 127/583 (21%), Positives = 236/583 (40%), Gaps = 76/583 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL------GL 59
           + +S L+                   +V+   +    G    N+AM +S+ L       +
Sbjct: 71  NINSCLQEIFGAAIQA-AYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQVLLKTREQKV 129

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE IV  I  +  ++ V IAG GFIN++L   ++ K LSS++++G++     IGK
Sbjct: 130 SPREIAEKIVKSIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLLINGVQPP--AIGK 187

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV ++F S N    MHVGH R  ++G+++  L  F GY+V R  ++ D G Q   L  
Sbjct: 188 RKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLNHLGDWGTQFGMLIA 247

Query: 180 SVFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            +  ++   L       DL + +Y     +   +E   K + + +   + K    +K  +
Sbjct: 248 HLQDKFPDYLSVSPPIGDL-QAFYKESKQRFDTEEEFKKRAYQCVVLLQSKNPDFIK--A 304

Query: 238 VQAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
              +  + R + + +    DI +    E  +H      ++DI+     +G+V        
Sbjct: 305 WNLICDVSRREFQKIYNCLDITLIERGESFYHEM----MKDIVKEFEDKGFVQVD----- 355

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMI 353
                     D ++++F   + G  V   ++KSDG +TY  +DLA  K +  E   D +I
Sbjct: 356 ----------DGRKVVF---VPGFPVPLTIMKSDGGFTYDTSDLAALKHRLCEEKGDILI 402

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ S  S +++ + A    +     ++  +      +       K   R+GD + L  +
Sbjct: 403 YVVDSGQSVHLQTVFAAGQMIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLIDL 462

Query: 414 VDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           ++E                             V    +++  L         F F K+ +
Sbjct: 463 LEEGLKRAMDKLKDKERDKVLTPEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLD 522

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLA 503
             + N   Y+ YA+ R R+I R A     ++D  +  +    +    D   E +L   + 
Sbjct: 523 -DRGNTAAYLLYAFTRIRAIARLA-----NIDEQMLQKAAREEVLVLDHEKEWKLGKCIL 576

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +P +++        + L  YLY+LA+ F   +       + R
Sbjct: 577 RFPEILQKILEDLLLHTLCDYLYELATTFTEFYDSCYCVEKDR 619


>gi|288932335|ref|YP_003436395.1| arginyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894583|gb|ADC66120.1| arginyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 547

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 147/575 (25%), Positives = 257/575 (44%), Gaps = 75/575 (13%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFINLYLSP 95
           R+     LST  A  +++     P  +AE +V+ I+ +    + SV +   G+IN +++ 
Sbjct: 21  RESEFADLSTTIAFKIAKERKEPPQKVAEELVSEIEFERSTYIGSVEVVN-GYINFFVNE 79

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            +L   +  I+     YG   +  G +V IE  SANP GP+HVGH R A++GDTLA +M 
Sbjct: 80  EFLSDTVERILDEDENYGSLNL--GGEVLIEHTSANPDGPLHVGHLRNAIIGDTLARMME 137

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            +G  VT  YY+ND G QI    L  + +Y  +    D  + E Y           EL  
Sbjct: 138 KAGMRVTTHYYVNDMGRQIAAAVLG-YLKYGLSEKKPDHAVAEAYIRINRDIEENPELEK 196

Query: 216 KYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           +    +L F   +E+     + + V   ++ I++ L+  +I HD FI E DF R     +
Sbjct: 197 EVDELMLKFERGDEEISEKFR-FVVDKALEGIKETLEKFDIHHDDFIYESDFVRN--GYV 253

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
             I+  L  +G +        +     K D+            G + +  L + +G+  Y
Sbjct: 254 ERILRMLEEKGLL--------EKDDVWKVDLKD---------YGIEKEVILRRENGTTLY 296

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              DLAY   K E  F+  I V+G+DH  Y ++L  +   +  K     VL  E V L  
Sbjct: 297 ITRDLAYHLWKNE-NFERFINVLGADHKLYSEQLSKILELLGLKPP--EVLFFEFVSLPE 353

Query: 394 DGMPIKMSKRAGDFITLRHVVDE----------------------VGSDSVRFMMLWRKN 431
                 MS R G F++   ++++                      V   ++R+  +    
Sbjct: 354 G----SMSTRKGKFVSADELLEKTFEEAKKILRERGSVDERIAKIVAVGAIRYDFVKVSP 409

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESE 490
            +   FD+ K  +  ++    Y+QY++AR  SI R+A +    +L+FD          + 
Sbjct: 410 EKPFTFDWSKALDFERQ-TASYIQYSHARACSILRKAVEAGRTELEFD---------PAI 459

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E +L++ L+++   +E A    +P   A YL  +A+ F+  ++  +       V  
Sbjct: 460 ITKKERELVMRLSKFSFYLEKAVNELKPSVFAEYLMSVANAFNDFYTDHQ-------VLV 512

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +++++ M RL +V A   ++ +GL ++G+E+P  M
Sbjct: 513 DDKRIRMHRLAIVDATRIVLRNGLELLGIEAPERM 547


>gi|9757672|dbj|BAB08191.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 605

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 120/632 (18%), Positives = 235/632 (37%), Gaps = 106/632 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLG-----LD 60
              +L   +         +  +   + + +P     G    N AM + SR  G      +
Sbjct: 25  VEQQLCTLITSSLRATVPDLDVEPMLEVSKP---GFGDYQCNNAMSVFSRIRGSATNFRN 81

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ + + I   +     ++S+ +AG G+IN+ LS +++ + +  ++V GI+     I   
Sbjct: 82  PMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCGIKTWAP-ILPV 140

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  ++F S N    MHVGH R  ++GDTLA +  F+  EV R  ++ D G Q   L   
Sbjct: 141 KRAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGDWGTQFGMLIEF 200

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK------ 234
           +F ++         D  +     V       + + K   +  +F E     +V+      
Sbjct: 201 LFEQFP--------DWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQAVVRLQGGED 252

Query: 235 --DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
               + + + +I R +   +  + ++ + E      +P  I  +++ L  +G +      
Sbjct: 253 KYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPY-IPPVLEELTNKGLI------ 305

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDN 351
                     +    +++F      +D    ++K DG + Y + DLA    +      + 
Sbjct: 306 ---------VESKGARVIF-----VEDHPLIVIKQDGGFNYASTDLAALWYRLNVEKAEW 351

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN------VLLCELVRLYRDGMPIKMSKRAG 405
           +IYV       +   L   A        Q          +   + L  DG   +   R  
Sbjct: 352 IIYVTDVGQQRHFHMLFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGK--RFRTRCS 409

Query: 406 DFITLRHVVDE---------------------------------VGSDSVRFMMLWRKNS 432
           + + L  ++DE                                 +G  +V++  L     
Sbjct: 410 EVVRLVDLLDEAKARSKAQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRL 469

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++    K N   Y+QYA+AR  SI R+A         D+    +    +   
Sbjct: 470 TDYTFSFDQMLS-DKGNTAVYLQYAHARICSIIRKA-------SKDVEKLKMTGAITLGH 521

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L +HL ++  V+E A    +P++L  YLY L+  F   +++ +       V  + 
Sbjct: 522 PYERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSLSLTFSKFYTNCQ-------VVGSP 574

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +    RL L  A   I+    +++G+   ++
Sbjct: 575 EE--TSRLLLCEATGIIMRQCFHLLGITPVHK 604


>gi|71985061|ref|NP_001022551.1| aRginyl aa-tRNA syntheTase family member (rrt-1) [Caenorhabditis
           elegans]
 gi|21431831|sp|Q19825|SYRC_CAEEL RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|15789291|gb|AAA91224.2| Arginyl aa-trna synthetase protein 1, isoform a, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 713

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/620 (20%), Positives = 245/620 (39%), Gaps = 72/620 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD-- 60
           +F    S  K  +++    + V       +++    +   G    N+AM ++  L  +  
Sbjct: 129 IFGRLQSLFKKAIEDAFPGLDVP------LLLAETPNPQFGDYQCNSAMPIAAKLKANKI 182

Query: 61  ---PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              P  +A+ I A++      V+ + +   GFIN++L+  YLR+ +S +   G++  +  
Sbjct: 183 NKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGVKLPKLT 242

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                +V ++F S N    MHVGH R  ++GD++  L    G++V R  +I D G Q   
Sbjct: 243 R---KRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGTQFGM 299

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L   ++ R+   L      LP+             +L   Y      F E++        
Sbjct: 300 LIAHLYDRFPDFLKK----LPD-----------ISDLQAFYKESKKRFDEDEQFKKRAYE 344

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            V  +     D +KA N   D+    +   +      I+D+ ++   Q  + E +     
Sbjct: 345 YVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFY-QDKMIELVKWVKT 403

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
           +K     + D +Q++F +   G D+   ++KSDG +TY  +DLA  K +  E   D  IY
Sbjct: 404 NKPDMLREEDGRQIMFPT---GCDIPLTVVKSDGGFTYDTSDLAALKYRMLEEKCDWNIY 460

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ S  S +++ + A           I  +      L       K   R+G+ + L  ++
Sbjct: 461 VVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFGLVLGDDKKKFKTRSGETVRLLDLL 520

Query: 415 -----------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                        D V    V++  L    ++   F F ++ E 
Sbjct: 521 SEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGCVKYADLSHTRTQDYVFSFDRMLE- 579

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAY R +SIF + +    DL   +     +P +      E +L   L + 
Sbjct: 580 DRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIASTPTLPLDH---PGEFKLAKQLLKL 636

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +     +   +++  Y+Y LA++FH  ++       +   +     + M RL L   
Sbjct: 637 SDCVLLVLDSLMLHQMCDYVYQLATLFHDFYNECY---VIENKEGEKPFVHMHRLALCDV 693

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++++   I+G+   N+M
Sbjct: 694 TRKVMSTCFKILGLREVNKM 713


>gi|257869595|ref|ZP_05649248.1| arginyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803759|gb|EEV32581.1| arginyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 563

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 122/610 (20%), Positives = 240/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +       E   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KQIVAQAIYAAVKEDLTLEQVSQLLENPKTAEHGDVAF-PAFALAKVYRKAPQQIASELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I      + + + G  ++N +++   + +  L +++     YG   IG    V I+  
Sbjct: 63  EKIDP-ASFEKIEVVGP-YLNFFMNKEVISEHVLQTVLKEKNHYGDQSIGNQQAVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
           A+       P      +Y++   +   DK     L      W   ++D    + +     
Sbjct: 181 AVKKE----PINELLRLYVEFHEQAENDKA----LEDEARAWFKKLEDGDQEATELWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + L+  N  +D+     D   G+      + ++++ L  +  + E        +  + 
Sbjct: 233 RDESLQEFNKIYDMLEVSFDSLNGEAFYNDKMTEVVELLEEKHLLQE-------DQGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   D+A    +     F   +YV+G++ 
Sbjct: 286 VDLTAYDL----------NPALIRKSDGATLYITRDMAAALYRKRTYNFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + +DG   K+S R G  + L  V++E    
Sbjct: 336 SYHFKQLKAVLKEMGFDWSD-DMHHIPFGLITKDGK--KLSTRKGKIVLLEEVLNEAIES 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AKEQITEKNPGLANKDEVAKQVGVGAVVFHDLKNDRLNNFDFTLEEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y++AR  SI  +A+          F        +  D    ++I  +  YP  I  A   
Sbjct: 452 YSHARAMSILEKAQ----------FDPANAQALALNDAESWEVIKLIQRYPETILQAADK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ ++++ +       + A + +    RL LV+AV  ++   L 
Sbjct: 502 YEPSVIAKHAIKLAQAFNKYYANVK-------ILAEDAQ-KDARLALVYAVTVLLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P++M
Sbjct: 554 LLGLHAPDKM 563


>gi|260906982|ref|ZP_05915304.1| arginyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 588

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 123/590 (20%), Positives = 213/590 (36%), Gaps = 75/590 (12%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N A+ L++ L   P  IA  IV  + +    ++  I+G GFINL  +  +
Sbjct: 32  RSSQFADFQANVALPLAKELKSKPRDIANTIVGNLDLADICETPEISGPGFINLTFTSDF 91

Query: 98  LRKILSSIVVSGIEYGRNLIGKG----------TKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L   L+    +          +G           +V I++ + N    MHVGH R  VVG
Sbjct: 92  LASTLNQGTAAEAVAETPATTEGATSEGAAAAGQRVVIDYSAPNVAKEMHVGHLRTTVVG 151

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYL 206
           D LA    F G  V R+ +I D G     L   +     ++    D S  P  +Y     
Sbjct: 152 DALARTHEFLGNTVVRQNHIGDWGTPFGMLIEHLLDVGIESETAQDISANPNAFYQAARA 211

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K    E           F       +V+          + + L   +  +   I    + 
Sbjct: 212 KFDSDE----------AFATRARARVVELQGGDKQTLELWERLVGFSKTYFNHI----YS 257

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRP 323
             D +   D +   +        +    +     +   D    +F    +   G+ +   
Sbjct: 258 LLDVTLTDDDLAGESIYNDDLAAVCQELEDAGLARI-SDGALCVFPEGFTGREGEPLPLI 316

Query: 324 LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + KSDG Y Y   DLA  + +      D ++YV+G+  + + + + ++A A       + 
Sbjct: 317 IRKSDGGYGYATTDLAAVRHRVRNLNADRVLYVVGTPQAMHFEMVFSIARAAGWLPEGVE 376

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
               ++  +  D   I +  R+G  + L  ++DE                          
Sbjct: 377 FEHVKIGNVLGDDGKI-LRTRSGAPVRLAELLDEAVARAKATLQESNVEFDAEEEALVAK 435

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            VG  +V++  L   +     FD  ++      N   Y+QYA AR RSI R+A+      
Sbjct: 436 TVGIGAVKYADLSVAHDTSYTFDLDRMLV-PIGNTAPYLQYAGARIRSILRKAE------ 488

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             D F    I      + +E  L + L  +  V+        P++L  YL+DLA  F   
Sbjct: 489 -GDAFTAAPI---HLGEAAERDLGLALLGFSDVVAEVVAGSAPHRLCTYLFDLAQSFTSF 544

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           + A   ++   RL+L   V  ++ +GL ++G+  P  M
Sbjct: 545 YEQC------PVLIAETAEVRDSRLRLSQTVLEVLEAGLGVLGIRVPERM 588


>gi|268319019|ref|YP_003292675.1| hypothetical protein FI9785_528 [Lactobacillus johnsonii FI9785]
 gi|262397394|emb|CAX66408.1| argS [Lactobacillus johnsonii FI9785]
          Length = 558

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 135/611 (22%), Positives = 254/611 (41%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF  ++ + + E   ++ + K+ +  ++IERP++   G  +   A  L++    +P  IA
Sbjct: 2   DFKQKVVDLVSE---QVDLPKEKIS-MLIERPKNPKMGDYAFP-AFALAKIEHKNPALIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  +I  D    S+   G  ++N  +  + L    L+ ++     +G   +G+G    
Sbjct: 57  KDISEKI-SDDSFTSIQAVGP-YVNFAIDHAKLVNATLNDVLTEKEHFGDQKLGEGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A  +   GY   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKTLEKVGYTPIKINYLGDYGTQFGKLITAYRLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQA 240
             ++ +  +       YY   + +       +       + L   +E+ + + K +   +
Sbjct: 174 GNEEDVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +G + E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELKEKGLLEE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             ++             D+    +LKSDGS  Y   DLA     K E  F   +YV G +
Sbjct: 282 VVNLGE-----------DENPALILKSDGSSLYMTRDLAAALYRKKEYDFVMSLYVAGGE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            +G+ K+L+ V   +    +  N+       + + G   K+S R G+ +           
Sbjct: 331 QTGHFKQLKQVLKKMGYDWSD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDQVLKDAVS 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                           + V  +VG  +V F  L     +  DFD  +V  + + +   YV
Sbjct: 388 LAEQQIEEKNPNLSNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     ++  D    N        D     +   LA++P +++ A+ 
Sbjct: 447 QYTNARAQSILRKA---NKEISMDNLSLN--------DDWSFAVAKALADFPAIVKKASE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  DL+  F+ ++++ R       +   + +L   RL LV A + ++   L
Sbjct: 496 KFEPSIIAKYALDLSKKFNKYYANVR-------ILDEDDQL-NARLALVQATSIVLTEAL 547

Query: 575 NIIGVESPNEM 585
            ++GV +P EM
Sbjct: 548 RLLGVNAPKEM 558


>gi|328676625|gb|AEB27495.1| Arginyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 581

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 134/629 (21%), Positives = 244/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYAESFAKVVTSTR---EDVGHFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPVTVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    +D++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTAVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PITNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKSMTIASDLIGISIPERM 581


>gi|167538705|ref|XP_001751014.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770493|gb|EDQ84184.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1019

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 116/623 (18%), Positives = 242/623 (38%), Gaps = 76/623 (12%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERP--RDCAHGHLSTNAAMILS-----RPL 57
           D  S +   +   I        +     ++  P  +        +NAAM L+     +  
Sbjct: 87  DLMSVIVELVTAGIRAAFPQLGEEPVDALVSVPSGKVSTDAMYQSNAAMRLAAQLKAKGT 146

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            + P  +A    A I  +  +    IAG GF+N+ ++ S+L  + + ++  G+       
Sbjct: 147 KMPPREVAAAFTAAIPKNDIISGYEIAGPGFVNIDINTSFLEGVTTKLLNKGVLPPE--- 203

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                V ++F S N    MHVGH R  ++G+++A ++ + G++V R  ++ D G     L
Sbjct: 204 HTKQPVIVDFSSPNIAKEMHVGHLRSTIIGESIARMLEYIGHDVQRVNHVGDWGTPFGML 263

Query: 178 ALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              +  ++   Q+   + SDL   Y           E   +    ++         I+  
Sbjct: 264 ICHLRDKFPNFQSEPPSISDLQGFYKAAKKRFDEEPEFKPRVYEAVVKLQAHDPETIL-- 321

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +   +  + R + + +  + DI + E    F++     + +++  L   G + E    P
Sbjct: 322 -AWNLVCDVSRREFQRIYDRLDIDVKEKGESFYQ---DMMVEVVKQLESAGKLEEDDTAP 377

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG------SYTYFAADLAYFKCKYER 347
                        +++ + S      V   ++KSDG       YTY  +DLA  + +  +
Sbjct: 378 ------------GRKIAWSSVKKETKVPLIVVKSDGARCGMTGYTYDTSDLAALRYRASQ 425

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               ++YV+ +  S + + + A+   +     K +++ +    V L  DG   +   R+G
Sbjct: 426 -ATWLVYVVDNGQSTHFQNVFALGRDMEWVSPKHRVDHV-GFGVVLGEDGK--RFKTRSG 481

Query: 406 DFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           D + L+ ++DE                         +    +++  L    +    F + 
Sbjct: 482 DTVRLKDLLDEGVERAGAAARTTEMTPEQRARMVEAIAYGCIKYADLSHNRTNDYVFSYD 541

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           K+  Q K N   Y+ YA  R  SI R  +    ++D D    +     +     E+++  
Sbjct: 542 KML-QDKGNTAVYLLYANTRVHSILRNPEIAKQNIDIDALAPS--HTVTLTHPKEIKIAK 598

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           +LA +P V+        P++L  Y+Y+L +VF   +       +         K+ + RL
Sbjct: 599 YLARFPEVLNRTIDTLMPHRLCDYIYELTNVFTEFYQECYAVQKQSDGSV---KVDVNRL 655

Query: 561 QLVHAVASIINSGLNIIGVESPN 583
            L  +V  ++    +++G+ +  
Sbjct: 656 MLYKSVGMVLEQAFHLLGIRAIE 678


>gi|182437971|ref|YP_001825690.1| arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238688989|sp|B1VTB7|SYR_STRGG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|178466487|dbj|BAG21007.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 594

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/625 (21%), Positives = 231/625 (36%), Gaps = 73/625 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L+  L +       +    D ++    R         N  + L++ L  +
Sbjct: 1   MASVPSLASTLQQQLADALTAALPDAGAADPLL----RRSDRADFQANGILALAKKLKGN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGK 119
           P  +A  + A +     +  + ++G GF+N+ L+   + + L++    G    G  L   
Sbjct: 57  PRELAAQVTAALPAGGLIKDIEVSGPGFLNVTLTDRAIVETLAARAADGEGRLGVPLKDD 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                I++   N    MHVGH R AV+GD +  ++ F+G  V R ++I D G Q   L  
Sbjct: 117 AGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTGENVVRRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +      AL +     P                  K S  L +  EE      K  S  
Sbjct: 177 YLIEH-PGALQHEGG--PGDGASDGEAAMSTLNRVYKESRALFDSDEE-----FKARSRD 228

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH------RGDPSPIRDIIDNLARQGYVYEGILPP 293
            ++ +   D   L + H  F+ E   +      + D       I   +    + E     
Sbjct: 229 RVVALQAGDPGTLELWH-RFVDESKIYFHSVFDKLDMEIRDPDIVGESGYNDMLEETCRI 287

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGF 349
            +         +    +F   + G D +R    + K++G Y Y A DL+  + +  +   
Sbjct: 288 LEETGVA-VRSEGALCVFFDDVKGPDGNRVPLIVKKTNGGYGYAATDLSAVRNRVQDLKA 346

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFI 408
           D ++YV+ +  S + + +   A         +  V L     L +DG P K   R G+ +
Sbjct: 347 DTLLYVVDARQSLHFRMVFETARRAGWLGDDVKAVQLAFGTVLGKDGKPFK--TREGETV 404

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L  ++DE                             VG  +V++  L         FD 
Sbjct: 405 RLEDLLDEAVQRATAVVRDKAEKVGLSEEEIVENGRYVGIGAVKYADLSTSAVRDYKFDL 464

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++     +  V Y+QYAYAR RSI R+A D  P              E E   +E  L 
Sbjct: 465 DQMVALHGDTSV-YLQYAYARIRSILRKAGDAVP----------AAHPELELAPAERALG 513

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           +HL ++  V+       EP+KLA YLY LAS     +   +          N  ++   R
Sbjct: 514 LHLDQFGEVLAEVGTGYEPHKLAAYLYQLASHLTTFYDQCQVLSP-----DNAPEVVENR 568

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           L LV   A  ++ G+ ++G+ +P  
Sbjct: 569 LFLVELTARTLHRGMALLGIRTPER 593


>gi|256787088|ref|ZP_05525519.1| arginyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770986|ref|ZP_06530364.1| arginyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289701185|gb|EFD68614.1| arginyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 586

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/624 (20%), Positives = 231/624 (37%), Gaps = 79/624 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      S  ++ +L       + E    D ++    R         N  + L++    +
Sbjct: 1   MASVTSLSDSVQQHLASALTATRPEAAGADPLL----RRSDRADYQANGILALAKKTKAN 56

Query: 61  PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  +A  +VARI   D  ++ V ++G GF+N+ ++   +   L++ +  G   G  L   
Sbjct: 57  PRELAAEVVARITTGDELIEDVEVSGPGFLNITVADRAITANLAARLADGERLGVPLKQD 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                +++   N    MHVGH R AV+GD L S++ F+G +    ++I D G Q   L  
Sbjct: 117 AGTTVVDYAQPNVAKEMHVGHLRSAVIGDALRSMLDFTGEKTIGRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +F    +     D D           +     L   Y +    F  ++         V 
Sbjct: 177 YLFEHPGELAPAGDVDG----------EQAMSNLNRVYKASRAVFDTDEEFKERARRRVV 226

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A+    ++ L         F+ E   +    S    +   +     V E        +T 
Sbjct: 227 ALQSGDKETLDLWQ----QFVDESKVYFY--SVFEKLDMEIRDDEIVGESAYNDGMPETA 280

Query: 300 QKCDMDRKQ--------LLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERG 348
           +  +             + F      DD   PL+  K+DG + Y A+DL   + +  +  
Sbjct: 281 RLLEETGVAVRSEGALVVFFDEIRGKDDQPVPLIVQKADGGFGYAASDLTAIRNRVQDLH 340

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDF 407
              ++YV+    S + + +   A        ++    +     L  DG P K   RAG+ 
Sbjct: 341 ATTLLYVVDVRQSLHFRMVFETARRAGWLGDEVTAHNMGYGTVLGADGKPFK--TRAGET 398

Query: 408 ITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           + L  ++DE                           VG  +V++  L    +    FD  
Sbjct: 399 VRLEDLLDEAVQRAAEVVREKARDLTEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLD 458

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++   + +  V Y+QYAYAR +SI R+A ++ P              E     +E  L +
Sbjct: 459 QMVSLNGDTSV-YLQYAYARIQSILRKAGEVRP----------AAHPELALHEAERALGL 507

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL  +   +  A     P+KLA YLY LAS++   +           ++A   +    RL
Sbjct: 508 HLDAFGTTVFEAAAEYAPHKLAAYLYQLASLYTTFYDKC------PVLKAETPEQVENRL 561

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L    A  ++ G+ ++G+ +P  
Sbjct: 562 FLCDLTARTLHRGMALLGIRTPER 585


>gi|254577347|ref|XP_002494660.1| ZYRO0A06710p [Zygosaccharomyces rouxii]
 gi|238937549|emb|CAR25727.1| ZYRO0A06710p [Zygosaccharomyces rouxii]
          Length = 646

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 126/618 (20%), Positives = 235/618 (38%), Gaps = 75/618 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+    ++NY+ E   K+           +E       G L       L R  G++P  I
Sbjct: 67  ANVVDLMRNYVAEELSKVSGVDAKQIYPALEWTNTLERGDLLIPVP-RLVRQKGINPREI 125

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKV 123
           A+    +      + +V   G  F+  + +P +L   ++  I+    +YG     +  KV
Sbjct: 126 AQEWAEKFPQGELISNVEANGP-FVQFFFNPQFLFHTVVPDILTRTEDYGACKYVENKKV 184

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF S N   P H GH R  ++G  L++L    G+EV R  Y+ D G Q   LA+  + 
Sbjct: 185 LIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKCGWEVIRMNYLGDWGKQFGILAVG-YE 243

Query: 184 RYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEEKWLPIVKDY--SV 238
           RY        ++ P  +   VY+   K + +E      SE  +     +   ++D   + 
Sbjct: 244 RYGD--EKKLAEDPIDHLFQVYVRVNKDIEQESDSLPESESTDGQSRAYFKRMEDGDPAA 301

Query: 239 QAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             + +  R+            LNI +D++  E    +     +   +     +G V+   
Sbjct: 302 IKLWQKFRELSIEKYIGTYARLNIHYDVYSGESQVSK---ESMEKALKLYDEKGLVH--- 355

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERG 348
                        +DR   L   T     + + ++ KSDG+  Y   D+     +Y +  
Sbjct: 356 -------------IDRGAKLIDMTRFNKKLGKVIVQKSDGTTLYLTRDIGAAIDRYNKYH 402

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVR----------------- 390
           FD MIYV+ S    +  +   +   +  + A+ ++ +   +V+                 
Sbjct: 403 FDKMIYVIASQQDLHTAQFFELLKQMGFEWAKNLHHVNFGMVQGMSTRKGTVVFLNNILE 462

Query: 391 LYRDGMPIKMSKRA---GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
             +D M   M K             V D VG  +V    +  K     +F + ++    +
Sbjct: 463 ETKDNMHEVMKKNEVKYAQVENPDEVADLVGISAVMIQDMQGKRINNYEFKWERMLSF-E 521

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+QYA++R RS+ R         D  +        +   + + + L+  L++YP 
Sbjct: 522 GDTGPYLQYAHSRLRSMERNVP------DITVADMKNADFKLLQEPAAIALVRLLSQYPD 575

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+ NA    EP  +  YL+ L       +        + +V    ++L  +RL L  A  
Sbjct: 576 VLRNALKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTKELATVRLALYAATR 628

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +G+ ++G+     M
Sbjct: 629 QVLFNGMKLLGLTPVERM 646


>gi|118497156|ref|YP_898206.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323454|ref|ZP_03057231.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208778949|ref|ZP_03246295.1| arginyl-tRNA synthetase [Francisella novicida FTG]
 gi|254372523|ref|ZP_04988012.1| arginine-tRNA ligase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373984|ref|ZP_04989466.1| arginyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|166232788|sp|A0Q5D7|SYR_FRATN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118423062|gb|ABK89452.1| arginyl-tRNA synthetase [Francisella novicida U112]
 gi|151570250|gb|EDN35904.1| arginine-tRNA ligase [Francisella novicida GA99-3549]
 gi|151571704|gb|EDN37358.1| arginyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|194322309|gb|EDX19790.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744749|gb|EDZ91047.1| arginyl-tRNA synthetase [Francisella novicida FTG]
          Length = 581

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 134/629 (21%), Positives = 244/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYAESFAKVVTSTR---EDVGHFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPVTVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    +D++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTAVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PITNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKAMTIASDLIGISIPERM 581


>gi|170028825|ref|XP_001842295.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167877980|gb|EDS41363.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 664

 Score =  372 bits (955), Expect = e-100,   Method: Composition-based stats.
 Identities = 122/595 (20%), Positives = 235/595 (39%), Gaps = 79/595 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           VI        G    N AM + + L       +P  +A  I+  +   P +  V +AG G
Sbjct: 105 VITVSGVPKFGDYQCNNAMQIVQKLKALDVKTNPRDVAVKIMEAVPQSPMISKVEVAGAG 164

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N++L  ++  + + SI+  G+   +  +    +V ++F S N    MHVGH R  ++G
Sbjct: 165 FVNVFLDKTFGAEAIMSILKDGV---KPPVFARKRVIVDFSSPNIAKEMHVGHLRSTIIG 221

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVY 205
           D++   + F G++V R  ++ D G Q   L   +  R+   L       DL   Y     
Sbjct: 222 DSICRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPIGDLQAFYKESKT 281

Query: 206 LKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                +E   +  + ++     +   L   K      +  + R + + +  + D+ + E 
Sbjct: 282 RFDSDEEFKKRAYACVVKLQGGDADSLKGWK-----LICDVSRKEFQKVYDRLDVKLIER 336

Query: 264 --DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              F++     +  I+ +LA+Q ++ E              D  RK +        D + 
Sbjct: 337 GESFYQK---RMESIVKDLAKQQFLEE--------------DDGRKIMW---GENKDGIP 376

Query: 322 RPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             ++KSDG +TY  +D+A  K + +E   + ++YV  +  + +   + + A         
Sbjct: 377 LTIIKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFYTIFSCARRAKILDPA 436

Query: 381 INV--LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           ++    +   V L  DG   K   R+GD + L  ++DE                      
Sbjct: 437 VHRVDHVGFGVVLGEDGK--KFKTRSGDTVKLTELLDEGLKRSLDKLLEKERDKVLTPEE 494

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  V    +++  L    +    F F K+ E  K N   Y+ YAY R RSI R   
Sbjct: 495 LKAAQESVAYGCIKYADLSHNRNNEYIFSFDKMLE-DKGNTAVYLLYAYTRIRSIARNCG 553

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             F +   D+       Q S     E +L   L ++  V++  +     + L  ++YD++
Sbjct: 554 GDFAN---DIDKVIASTQLSLDHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEFVYDVS 610

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + F   +       + +  Q    K+   R+ L  A + ++    +I+G++  ++
Sbjct: 611 TTFTEFYDSCYCIEKNK--QGEIVKINAGRVLLCEATSRVLGKCFDILGLKPLHK 663


>gi|15236164|ref|NP_194360.1| emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA
           ligase/ arginine-tRNA ligase/ nucleotide binding
           [Arabidopsis thaliana]
 gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|4539426|emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332659782|gb|AEE85182.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score =  372 bits (955), Expect = e-100,   Method: Composition-based stats.
 Identities = 128/630 (20%), Positives = 234/630 (37%), Gaps = 91/630 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIER----PRDCAHGHLSTNAAMILSRP 56
           M    +F+  LK  L ++   + ++  + D   +E           G    N AM L   
Sbjct: 53  MAANEEFTGNLKRQLAKLF-DVSLKLTVPDEPSVEPLVAASALGKFGDYQCNNAMGLWSI 111

Query: 57  LG------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           +         P  + + +V  +     V+S  +AG GFIN+ LS  ++ K + ++++ G+
Sbjct: 112 IKGKGTQFKGPPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGV 171

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +     +    +  ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D 
Sbjct: 172 DTWAPTL-SVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDW 230

Query: 171 GAQINTLALSVFWRYQQ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           G Q   L   +F ++            DL   Y    +   + +   +K    ++    +
Sbjct: 231 GTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRL--Q 288

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              P+ +  +   +  I R +   +  +  + + E      +P  I  +I+ L  +G V 
Sbjct: 289 GGDPVYRK-AWAKICDISRTEFAKVYQRLRVELEEKGESFYNP-HIAKVIEELNSKGLVE 346

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           E                +  +++F   + G D+   ++KSDG + Y + DL     +  E
Sbjct: 347 ES---------------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNE 388

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMS 401
              + +IYV       +       A                  +   + L  DG   +  
Sbjct: 389 EKAEWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGK--RFR 446

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            RA D + L  ++DE                             VG  +V++  L     
Sbjct: 447 TRATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRL 506

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++    K N   Y+ YA+AR  SI R++       D D   +         D
Sbjct: 507 TNYTFSFDQMLN-DKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHAD 560

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L +HL  +   +E A     P  L  YLY+L+  F   +S+ +       V  + 
Sbjct: 561 --ERALGLHLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSNCQ-------VNGSP 611

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +    RL L  A A ++    +++G+   
Sbjct: 612 EE--TSRLLLCEATAIVMRKCFHLLGITPV 639


>gi|225445067|ref|XP_002280299.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 649

 Score =  372 bits (955), Expect = e-100,   Method: Composition-based stats.
 Identities = 127/588 (21%), Positives = 228/588 (38%), Gaps = 87/588 (14%)

Query: 40  CAHGHLSTNAAMIL-SRPLGLD------PLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
              G    N AM L SR           P TI ++I+  +     ++   +AG GF+N+ 
Sbjct: 101 PKFGDYQCNNAMGLWSRIKNKKDNGFKGPPTIGKVIMENLPPTEMIEKCTLAGPGFVNIK 160

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS S++ K +  +++ GIE     +    +  ++F S N    MHVGH R  ++GDTLA 
Sbjct: 161 LSTSWIAKNIQKMLIIGIETWAPRL-PIKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLAR 219

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHV 209
           ++ FS  +V R  ++ D G Q   L   +F ++   + A      DL E Y         
Sbjct: 220 MLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKFPNWEHASAQAIGDLQEFYKASKKRFDE 279

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                 +    ++     +        +   + +I R++   +  +  + + E      +
Sbjct: 280 DPAFKGRAQQAVVRLQGGETSY---RRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYN 336

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           P  I  +I+ L+ QG V E       S+  +   ++           G ++   ++KSDG
Sbjct: 337 PY-IPGVIEQLSNQGLVEE-------SQGARVIHIE-----------GVNIPLIVVKSDG 377

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV----- 383
            Y Y + D+A    +  E   + +IYV       + + + + A       A  N+     
Sbjct: 378 GYNYASTDMAALWYRLNEEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNMYPKAS 437

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
            +   + L  DG   +   R  + + L  ++DE                           
Sbjct: 438 HVGFGLVLGEDGK--RFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELEHTA 495

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             VG  +V++  L         F+F ++    K N   Y+ YA+AR  SI R++      
Sbjct: 496 EAVGYGAVKYADLKNNRLTNYTFNFDQMLN-DKGNTAVYLLYAHARICSIIRKSGK---- 550

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D D   +  +      D  E  L +HL ++  V+E A     P  L  YLY+L+  F  
Sbjct: 551 -DIDELKKTGVLTLDHDD--ERGLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSENFTK 607

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +S+ +       V  +  +    RL L  A A ++    +++G+   
Sbjct: 608 FYSNCQ-------VVGSAEE--TSRLLLCEATAVVMRKCFHLLGITPV 646


>gi|226491618|ref|NP_001148134.1| arginyl-tRNA synthetase [Zea mays]
 gi|194698640|gb|ACF83404.1| unknown [Zea mays]
 gi|195616022|gb|ACG29841.1| arginyl-tRNA synthetase [Zea mays]
          Length = 604

 Score =  372 bits (955), Expect = e-100,   Method: Composition-based stats.
 Identities = 124/628 (19%), Positives = 236/628 (37%), Gaps = 103/628 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLG-----L 59
             S  + + L+     ++VE       ++E            N AM L S+  G      
Sbjct: 26  QLSRLVLSSLQTTLPDVEVEP------MVEVS--AKFADYQCNNAMGLWSKVKGSGTIFK 77

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P +I + I   +     ++S  +AG GF+N+ LS  ++ + +  ++V+GI+    ++  
Sbjct: 78  NPNSIGQAIAKNLPSSDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNGIKTWAPVLPV 137

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                ++F S N    MHVGH R  ++GDTLA +  FS   V R  ++ D G Q   L  
Sbjct: 138 NRT-VVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGDWGTQFGMLIE 196

Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVK 234
            +F ++   Q+       DL   Y    +      +   +    ++     E+K+    K
Sbjct: 197 YLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQGGEDKYREAWK 256

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                 +  I R +   +  + ++ + E      +P  I  +++ L+ +G + E      
Sbjct: 257 -----KICDISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEELSNKGLIKES----- 305

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                     +  +++F   + G  +   ++KSDG + Y + DL     +      + +I
Sbjct: 306 ----------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLTALWYRLNVEQAEWII 352

Query: 354 YVMGSDHSGYVKRLEAVAAAVSE------KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           YV       +   + + A           KK      +   + L  DG   +   R+ + 
Sbjct: 353 YVTDVGQQQHFDMVFSAAKMAGWLPDPSEKKFPKTSHVGFGLVLGSDGK--RFRTRSTEV 410

Query: 408 ITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSEL 434
           + L  ++DE                                 VG  +V++  L       
Sbjct: 411 VRLVELLDEAKSRSKSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKYADLKNNRLTN 470

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             F F ++    K N   Y+QYA+AR  SI R++     +L             S     
Sbjct: 471 YTFSFEQMLS-DKGNTAVYLQYAHARICSIIRKSNKNVEELKMSGAI-------SLDHPD 522

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L ++L  +  V+E A     P  +  YLY+L+ +F   +++ +       V  +  +
Sbjct: 523 ERVLGLYLIRFAEVVEEACTNLLPNVVCEYLYNLSEMFTKFYTNCQ-------VVGSPEE 575

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESP 582
               RL L  A A ++    N++G+   
Sbjct: 576 --TSRLLLCQATAVVMRQCFNLLGITPV 601


>gi|282165349|ref|YP_003357734.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282157663|dbj|BAI62751.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 564

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/580 (25%), Positives = 246/580 (42%), Gaps = 79/580 (13%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           + AH  +S+     L + L  +P  IA+ IV+++     +  V  AG  ++N Y +  YL
Sbjct: 31  ESAHADVSSALPFRLGKELKKNPAQIAKEIVSKMGTSEHIGKVDAAGP-YVNFYANEKYL 89

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L  I+  G      L  KG KV +E  SANPTGP+HVG  R  V+GDTLA +M   G
Sbjct: 90  AESLGDILKKGRSS-VLLPPKGVKVVLEHTSANPTGPLHVGRGRNPVIGDTLARVMRSGG 148

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG----KELA 214
           Y+V  +YY++D G Q  T+          +L   + + P+     VY          E  
Sbjct: 149 YDVQVQYYVDDMGKQEATIVWGYDHLDSLSLKPPEIEKPDHAIVEVYRAATDLRKSNEAV 208

Query: 215 DKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +K  SE+LN  E     + + +   V   M   +  L  +N+ +D+F+ E  F +     
Sbjct: 209 EKEISEILNKYEHMDPEVSEKFKKMVNTCMDGQKTTLARMNVFYDLFVWESGFVKN--GS 266

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + +I++ LA+                T   +     L    +  G D D  L ++DG+  
Sbjct: 267 VNEIVERLAK----------------TPYAERKDGALALNLSSFGMDKDFVLTRADGTSL 310

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+AY   K     D  + V+G D    ++RL+A    + EKK    ++    V L 
Sbjct: 311 YTTRDIAYHIWKLS-NCDEAVNVLGEDQKLAMQRLDATLKILGEKKT-PRIVFYSFVSLP 368

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425
                 +MS R G  + L  ++DE                           VG  ++RF 
Sbjct: 369 EG----RMSTRKGVVVNLDDLLDEAVARAYIEVDKRRKDLPEDKKRKIADLVGIGAIRFD 424

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ++     + + F + +  +  K+    ++QY++AR  SI  +AK    D           
Sbjct: 425 IIRVAPEKSITFKWEQALDFEKQG-APFIQYSHARTCSILEKAKPGSFDATV-------- 475

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 +  E  LI  +A  P V++ A+   +P+ LA Y  +LA  F+  +       R 
Sbjct: 476 ----LKEKEEAALIKKMAMLPYVVDVASKDLKPHLLANYARELAESFNQFY-------RF 524

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V +   +L   RL LV A    + + L+++G+ +P EM
Sbjct: 525 VPVLSAEPELREARLALVDAARITLANALDLLGIAAPEEM 564


>gi|157117728|ref|XP_001658908.1| arginyl-tRNA synthetase [Aedes aegypti]
 gi|108884575|gb|EAT48800.1| arginyl-tRNA synthetase [Aedes aegypti]
          Length = 671

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 117/593 (19%), Positives = 243/593 (40%), Gaps = 75/593 (12%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           VI        G    N AM + + L       +P  +A  ++  +   P +  V +AG G
Sbjct: 112 VITVSSSAKFGDYQCNNAMQIVQKLKALDVKTNPRDVANKLMEALPPSPAISKVEVAGAG 171

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N++L  ++    + SI+  G++  +    +  +V ++F S N    MHVGH R  ++G
Sbjct: 172 FVNVFLDKAFGASAIMSILKDGVKPPQ---FEKRRVIVDFSSPNIAKEMHVGHLRSTIIG 228

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVY 205
           D+++  + F G++V R  ++ D G Q   L   +  R+   L      SDL +G+Y    
Sbjct: 229 DSISRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPISDL-QGFYKESK 287

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-- 263
            +    E   K +   +   +      +K  + + +  + R + + +  + ++ + E   
Sbjct: 288 SRFDSDEDFKKRAYACVVKLQSGDDDSMK--AWKLICDVSRKEFQKVYDRLNVKLIERGE 345

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            F++     +  I+  LA  G++ E                + +++++     G  +   
Sbjct: 346 SFYQK---RMEAIVKELANAGFLEED---------------EGRKIMWGENRNG--IPLT 385

Query: 324 LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           ++KSDG +TY  +D+A  K + +E   + ++YV  +  + + + + + A   +     ++
Sbjct: 386 IIKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFQTIFSCARRANVLDPNVH 445

Query: 383 V--LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
               +   V L  DG   K   R+GD + L  ++DE                        
Sbjct: 446 RVDHVGFGVVLGEDGK--KFKTRSGDTVKLTELLDEGLKRSLDKLLEKERDKVLTPEELK 503

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                V    +++  L    +    F F K+ E  K N   Y+ YAY R RSI R     
Sbjct: 504 QAQESVAYGCIKYADLSHNRNNEYIFSFDKMLE-DKGNTAVYLLYAYTRIRSIARNCGGD 562

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
           F +    +     +  + E    E +L   L ++  V++  +     + L  ++Y++++ 
Sbjct: 563 FANNIEKVIDTTELTLDHE---KEWKLAKVLLKFTDVMKLISKNLCLHHLCEFVYEVSTT 619

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           F   +       + +  Q    K+   R+ L  A + I+    +I+G++  ++
Sbjct: 620 FTEFYDSCYCIEKNK--QGEIVKINAGRVLLCEATSRILGKCFDILGLKPLHK 670


>gi|332030674|gb|EGI70362.1| Arginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 684

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 135/634 (21%), Positives = 250/634 (39%), Gaps = 84/634 (13%)

Query: 1   MYLF--ADFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55
           M LF  AD  S +KN +  +  K         +   +++    +   G    N+AM L++
Sbjct: 86  MGLFGTADTIS-IKNNVSAVFHKAISAAYPDILDPPVIVTTSTNPKFGDYQCNSAMPLAQ 144

Query: 56  PL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
            L      + P  +A+ I++++K+   ++   IAG GFIN+YL   + + +L + + +G 
Sbjct: 145 QLSSSGFKVSPRDVAKEIMSKLKVSSVIEKYEIAGAGFINIYLKREFGQSVLRNWLWAGE 204

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
                   K  +V ++F S N    MHVGH R  ++GD+++ L+ + G++V R  ++ D 
Sbjct: 205 VLP--PYVKKKRVVVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRLNHVGDW 262

Query: 171 GAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G Q   L   +  ++   L       DL   Y          +E   +    ++     +
Sbjct: 263 GTQFGMLIAHLQDKFPNYLTITPPIEDLQTFYKESKTRFDEDEEFKKRAYECVVKL---Q 319

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYV 286
                   + + +  + R + + +  + DI + E    F++     +  II  L  +  +
Sbjct: 320 AFEPNMTKAWKMICDVSRQEFEKVYTRLDIKLIERGESFYQK---YMESIIQELESKNML 376

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
                           + D  + +      G  V   ++KSDG +TY  +D+A  K + E
Sbjct: 377 ----------------EEDNGRKIMWGEKHGSGVPLTIVKSDGGFTYDTSDMACIKYRIE 420

Query: 347 RG-FDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKM 400
           +   D    +IYV  +  S + + +++ A      K   +++ +    V L  D    K 
Sbjct: 421 KERADWASILIYVTDAGQSLHFQIIKSCAKRAGILKSFHRMDHVGFGAV-LGEDKK--KF 477

Query: 401 SKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKN 431
             R+GD + L  ++DE                             V    +++  L    
Sbjct: 478 KTRSGDTVKLSELLDEGLKRALQKLKEKERDKVLSQEELKAAQESVAYGCIKYADLLHNR 537

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           +    F F K+ E  K N   Y+ YA  R RSI R A     +    L  R+     S  
Sbjct: 538 NHEYVFSFDKMLE-DKGNTAVYLLYALTRIRSIARTANITKDE----LRQRSHEVPISLE 592

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
              E +L   L ++P VI   T       L  + Y+++  F   +         +     
Sbjct: 593 HEKEWKLAKVLLKFPDVILGVTEDLYLNPLCEFCYEVSCAFTEFYDKCYC--VEKDQSGE 650

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             K+ M RL L+ A A I+    +++G++S  +M
Sbjct: 651 IVKINMGRLLLMEATALILEKCFSLLGLKSVAQM 684


>gi|333025212|ref|ZP_08453276.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745064|gb|EGJ75505.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 597

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 126/586 (21%), Positives = 222/586 (37%), Gaps = 66/586 (11%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A  +VA +     +  V ++G GF+N+ +S   
Sbjct: 34  RRSDRADFQANGVLALAKKAKANPRELATRVVAALPDSTVIKDVEVSGPGFLNITVSDEA 93

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L + L++   +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+
Sbjct: 94  LVRNLAARAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFT 153

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G  V R ++I D G Q   L   +     +   ++DS                  L   Y
Sbjct: 154 GETVIRRHHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEA----AMSNLNRVY 209

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +    F E++     KD + + ++ +   D + L   H        +       +    
Sbjct: 210 KASKALFDEDEG---FKDRARRRVVDLQAGDEETLAFWHRFVDESKVYFNALFGKLD--- 263

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-------LFRSTMVGDD---VDRPLLKS 327
            ++     V E       ++T    +     +       +F   + G D   V   + KS
Sbjct: 264 MDIRDADIVGESGYNDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVRKS 323

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
           +G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V L
Sbjct: 324 NGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAVQL 383

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
                L  DG P K   RAG+ + L  ++DE                             
Sbjct: 384 AFGTVLGADGKPFK--TRAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERGAQ 441

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A D      
Sbjct: 442 VGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSG---- 496

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++   +
Sbjct: 497 ---APAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTTFY 553

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                         N  ++   RL L       + +GL ++G+ +P
Sbjct: 554 DQCHVLS-----DDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAP 594


>gi|21221735|ref|NP_627514.1| arginyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|7674350|sp|Q9WX29|SYR_STRCO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5123649|emb|CAB45338.1| putative arginyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 586

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/624 (20%), Positives = 232/624 (37%), Gaps = 79/624 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      S  ++ +L       + E    D ++    R         N  + L++    +
Sbjct: 1   MASVTSLSDSVQQHLASALTATRPEAAGADPLL----RRSDRADYQANGILALAKKTKAN 56

Query: 61  PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  +A  +VARI   D  ++ V ++G GF+N+ ++   +   L++ +  G   G  L   
Sbjct: 57  PRELAAEVVARITTGDELIEDVEVSGPGFLNITVADRAITANLAARLADGERLGVPLKQD 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                +++   N    MHVGH R AV+GD L S++ F+G +    ++I D G Q   L  
Sbjct: 117 AGTTVVDYAQPNVAKEMHVGHLRSAVIGDALRSMLDFTGEKTIGRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +F    +     D D           +     L   Y +    F  ++         V 
Sbjct: 177 YLFEHPGELAPAGDIDG----------EQAMSNLNRVYKASRAVFDTDEEFKERARRRVV 226

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A+    ++ L         F+ E   +    S    +   +  +  V E        +T 
Sbjct: 227 ALQSGDKETLDLWQ----QFVDESKVYFY--SVFEKLDMEIRDEEIVGESAYNDGMPETA 280

Query: 300 QKCDMDRKQ--------LLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERG 348
           +  +             + F      DD   PL+  K+DG + Y A+DL   + +  +  
Sbjct: 281 RLLEEMGVAVRSEGALVVFFDEIRGKDDQPVPLIVQKADGGFGYAASDLTAIRNRVQDLH 340

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDF 407
              ++YV+    S + + +   A        ++    +     L  DG P K   RAG+ 
Sbjct: 341 ATTLLYVVDVRQSLHFRMVFETARRAGWLGDEVTAHNMGYGTVLGADGKPFK--TRAGET 398

Query: 408 ITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           + L  ++DE                           VG  +V++  L    +    FD  
Sbjct: 399 VRLEDLLDEAVQRAAEVVREKARDLTEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLD 458

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++   + +  V Y+QYAYAR +SI R+A ++ P              E     +E  L +
Sbjct: 459 QMVSLNGDTSV-YLQYAYARIQSILRKAGEVRP----------AAHPELALHEAERALGL 507

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL  +   +  A     P+KLA YLY LAS++   +           ++A   +    RL
Sbjct: 508 HLDAFGPTVFEAAAEYAPHKLAAYLYQLASLYTTFYDKC------PVLKAETPEQVENRL 561

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L    A  ++ G+ ++G+ +P  
Sbjct: 562 FLCDLTARTLHRGMALLGIRTPER 585


>gi|2632106|emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 128/630 (20%), Positives = 234/630 (37%), Gaps = 91/630 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIER----PRDCAHGHLSTNAAMILSRP 56
           M    +F+  LK  L ++   + ++  + D   +E           G    N AM L   
Sbjct: 1   MAANEEFTGNLKRQLAKLF-DVSLKLTVPDEPSVEPLVAASALGKFGDYQCNNAMGLWSI 59

Query: 57  LG------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           +         P  + + +V  +     V+S  +AG GFIN+ LS  ++ K + ++++ G+
Sbjct: 60  IKGKGTQFKGPPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGV 119

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +     +    +  ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D 
Sbjct: 120 DTWAPTL-SVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDW 178

Query: 171 GAQINTLALSVFWRYQQ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           G Q   L   +F ++            DL   Y    +   + +   +K    ++    +
Sbjct: 179 GTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRL--Q 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              P+ +  +   +  I R +   +  +  + + E      +P  I  +I+ L  +G V 
Sbjct: 237 GGDPVYRK-AWAKICDISRTEFAKVYQRLRVELEEKGESFYNP-HIAKVIEELNSKGLVE 294

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           E                +  +++F   + G D+   ++KSDG + Y + DL     +  E
Sbjct: 295 ES---------------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNE 336

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMS 401
              + +IYV       +       A                  +   + L  DG   +  
Sbjct: 337 EKAEWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGK--RFR 394

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            RA D + L  ++DE                             VG  +V++  L     
Sbjct: 395 TRATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRL 454

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++    K N   Y+ YA+AR  SI R++       D D   +         D
Sbjct: 455 TNYTFSFDQMLN-DKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHAD 508

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L +HL  +   +E A     P  L  YLY+L+  F   +S+ +       V  + 
Sbjct: 509 --ERALGLHLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSNCQ-------VNGSP 559

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +    RL L  A A ++    +++G+   
Sbjct: 560 EE--TSRLLLCEATAIVMRKCFHLLGITPV 587


>gi|307193340|gb|EFN76202.1| Arginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 683

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/620 (21%), Positives = 239/620 (38%), Gaps = 77/620 (12%)

Query: 11  LKNYLKEIDCK---IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-----GLDPL 62
           + N L +I  +   +         +++    +   G    N+AM L++ L      + P 
Sbjct: 96  INNTLCDIFREAIHLAYPDISDPPVIVTTSNNLKFGDYQCNSAMPLAQHLSSSGIKVIPR 155

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  I+++++    VD   IAG GFIN+YL   + +  L+S +  G         +  +
Sbjct: 156 NVANNIISKLEESFLVDKYEIAGPGFINIYLKRDFGQYTLNSWLKKGDVPP--PCVQRKR 213

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+++ L+ + G++V R  +I D G Q   L   + 
Sbjct: 214 VIVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRINHIGDWGTQFGMLIAHLQ 273

Query: 183 WRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            ++             + +Y     +    E   K + E +   +     I K  + Q +
Sbjct: 274 DKFPNYSTVAPPIQDLQAFYKESKTRFDTDENFKKRAYECVVKLQALEPEITK--AWQMI 331

Query: 242 MKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             + R + + L  + DI I E    F++     +  ++  L  +  + E           
Sbjct: 332 CDVSRQEFQKLYTRLDIKIIERGESFYQK---HMELVVKKLESKNMLEE----------- 377

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDN---MIYV 355
              D  RK +       G  +   ++KSDG +TY  +D+A  K + E    D    +IYV
Sbjct: 378 ---DNGRKIMWGEKRDSG--IPLTIVKSDGGFTYDTSDMAALKQRIEDERADWASILIYV 432

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  S + + LE+        K+   +  +   V L  D    K   R+GD + L  ++
Sbjct: 433 TDAGQSLHFQMLESCGRRAGILKSNHRMDHVGFGVVLGEDKK--KFKTRSGDTVKLIELL 490

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           DE                             V    +++  L    +    F F K+ E 
Sbjct: 491 DEGLKRALQKLKEKERDKVLSEEELKMAQESVAYGCIKYADLVHNRNHEYIFSFDKMLE- 549

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            K N   Y+ YA  R RSI R A     +    L         S     E +L   L ++
Sbjct: 550 DKGNTAVYLLYALTRIRSIARMANVTQDE----LRKHAHDTLVSLEHEKEWKLAKVLLKF 605

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+ N +     ++L  + Y+++  F   +       + +       K+ M RL L  A
Sbjct: 606 PDVLLNISQDMYLHQLCEFCYEISCAFTEFYDKCYCVEKNQA--GEIVKVNMGRLLLTEA 663

Query: 566 VASIINSGLNIIGVESPNEM 585
            A ++     ++G++    M
Sbjct: 664 TAIVMGKCFALLGLKPVTRM 683


>gi|89256875|ref|YP_514237.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315254|ref|YP_763977.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503050|ref|YP_001429115.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009231|ref|ZP_02274162.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290953627|ref|ZP_06558248.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313060|ref|ZP_06803754.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|109894993|sp|Q2A215|SYR_FRATH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|122324749|sp|Q0BKP4|SYR_FRATO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232787|sp|A7NDV6|SYR_FRATF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89144706|emb|CAJ80037.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130153|gb|ABI83340.1| arginine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156253653|gb|ABU62159.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 581

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/629 (21%), Positives = 244/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYAESFAKVVTSTR---EDVGHFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVISDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPITVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    +D++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTVVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PINNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKAMTIASDLIGISIPERM 581


>gi|282851111|ref|ZP_06260485.1| arginine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282558063|gb|EFB63651.1| arginine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 535

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/584 (22%), Positives = 239/584 (40%), Gaps = 81/584 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +IERP++   G  +   A  L++    +P  IA+ I  +I  D +  S+   G  ++N  
Sbjct: 2   LIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKEIAEKI-SDDNFTSIEAVGP-YVNFA 58

Query: 93  LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  + L    L+ ++     +G   +GKG    I+  S N   PM +GH R  V+G+++A
Sbjct: 59  IDHAKLVNATLNDVLTEKDHFGDQQLGKGNVP-IDMSSPNIAKPMSMGHLRSTVIGNSIA 117

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
             +   GY   +  Y+ D G Q   L  +   W  ++ +  +       YY   + +   
Sbjct: 118 KTLEKVGYTPIKINYLGDYGTQFGKLITAYRLWGNEEDVKKDPITNLFHYYVKFHEEAEK 177

Query: 211 KELADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               D       + L   +E+ + + K +   ++ +  R   K L +  D +  E  F+ 
Sbjct: 178 DPKLDDEGRAAFKKLENGDEEEIKLWKWFREVSLQEFNRI-YKELGVTFDSYNGEAFFN- 235

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D L  +G + E       S+  Q  ++             D+    +LKS
Sbjct: 236 ---DKMQPVVDELREKGLLEE-------SRGAQVVNLGE-----------DENPALILKS 274

Query: 328 DGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DGS  Y   DLA     K E  F   +YV G + SG+ K+L+ V   +    A  N+   
Sbjct: 275 DGSSLYMTRDLAAALYRKKEYDFVMSLYVAGGEQSGHFKQLKQVLKKMGYDWAD-NIHHI 333

Query: 387 ELVRLYRDGMPIKMSKRAGDFI-------------------------TLRHVVDEVGSDS 421
               + + G   K+S R G+ +                             V  +VG  +
Sbjct: 334 PFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNPNLANKDQVAHDVGVGA 391

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V F  L     +  DFD  +V  + + +   YVQY  AR +SI R+A     ++  D   
Sbjct: 392 VVFHDLKNDRMDNFDFDLEEVV-RFEGDTGPYVQYTNARAQSILRKA---NKEISMDNLS 447

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            N        D     +   +A++P ++  A+   EP  +A Y  DL+  F+ ++++ R 
Sbjct: 448 LN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKYALDLSKKFNKYYANVR- 498

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +   + +L   RL LV A + ++   L ++GV +P EM
Sbjct: 499 ------ILDEDDQL-NARLALVQATSIVLTEALRLLGVNAPKEM 535


>gi|307331363|ref|ZP_07610483.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306882986|gb|EFN14052.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 595

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/630 (20%), Positives = 242/630 (38%), Gaps = 90/630 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L A    R+ + L     +      +L        R         N  + L++ L  +P 
Sbjct: 7   LAATVHQRVVDALSAALPEAGSADPLL--------RRSDRADFQANGMLALAKKLQGNPR 58

Query: 63  TIAELIVARIKI-------DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            +A  +V+ + +       DP +  + ++G GF+N+ ++ S +   L++        G  
Sbjct: 59  ELAAKVVSHLPVAATSADPDPVIADIEVSGPGFLNITIADSAITATLAARAADD-RLGVP 117

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                    I++   N    MHVGH R AV+GD +  ++ F+G +V R ++I D G Q  
Sbjct: 118 FAQAPGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFAGEKVVRRHHIGDWGTQFG 177

Query: 176 TLALSVFWRYQQALYNND-------SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PE 226
            L   +     +  + +        S+L   Y     L     E  ++    +++    +
Sbjct: 178 MLIQYLIEHPHELDHKDAASGQQAMSNLNRLYKAARALFDSDPEFKERSRRRVVDLQAGD 237

Query: 227 EKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E+ + + + +  ++ +      D   + I     + E  ++      + +    L   G 
Sbjct: 238 EETIALWRKFVDESKIYFYSVFDKLDIEIHDPDVVGESGYN----DMLAETCRLLEESG- 292

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                    +S+       D  +        G+ V   + KSDG + Y A DL+  + + 
Sbjct: 293 ------VAVRSEGALCVFFDDIK-----GPEGNPVPLIVQKSDGGFGYAATDLSAIRDRV 341

Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKR 403
           +    D ++YV+ +  S + K +   A  +     Q++ V L     L +DG P K   R
Sbjct: 342 QHLKADTLLYVVDARQSLHFKMVFETARRIGWLNDQVHAVQLAFGTVLGKDGKPFK--TR 399

Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434
           AG+ + L  ++DE                             +G  +V++  L    S  
Sbjct: 400 AGETVRLEDLLDEATERAAAVVREKSEKLGLTEEDILERGAQLGVGAVKYADLSTSASRD 459

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             FD  ++   + +  V Y+QYAYAR +SI R+A++           R V   E     +
Sbjct: 460 YKFDLDQMVSLNGDTSV-YLQYAYARIQSILRRAEE---------GQRTVAHPELPLTKA 509

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L +HL ++   +       EP+KLA YLY LAS++   +      P L+        
Sbjct: 510 ERALGLHLDQFGETLGEVAAGFEPHKLAGYLYQLASLYTTFYDQC---PVLKA--EGGPS 564

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNE 584
               RL L    A  +  G+ ++G+ +P  
Sbjct: 565 QVENRLFLCDITARTLRQGMTLLGIRTPER 594


>gi|134302456|ref|YP_001122426.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166232789|sp|A4IZF4|SYR_FRATW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134050233|gb|ABO47304.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 581

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/629 (21%), Positives = 244/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYAESFAKVVTSTR---EDVGHFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPVTVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    +D++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTVVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PINNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKAMTIASDLIGISIPERM 581


>gi|254369750|ref|ZP_04985760.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122709|gb|EDO66838.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 581

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/629 (21%), Positives = 244/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYAESFAKVVTSTR---EDVGHFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPITVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    +D++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTVVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PINNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKAMTIASDLIGISIPERM 581


>gi|229096711|ref|ZP_04227682.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228686917|gb|EEL40824.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 562

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 234/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +     FD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVGLE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAID 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++ +VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFRQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|115462265|ref|NP_001054732.1| Os05g0163000 [Oryza sativa Japonica Group]
 gi|46981337|gb|AAT07655.1| putative Arginyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113578283|dbj|BAF16646.1| Os05g0163000 [Oryza sativa Japonica Group]
 gi|222630303|gb|EEE62435.1| hypothetical protein OsJ_17227 [Oryza sativa Japonica Group]
          Length = 606

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/629 (20%), Positives = 236/629 (37%), Gaps = 104/629 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLG-----L 59
             S  +   L+    +++V+       ++E       G    N AM L SR  G      
Sbjct: 27  QLSKLVIASLRTTVPEVEVDP------MVEVCT-AKFGDYQCNNAMGLWSRIKGSGTSFK 79

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  I + I   +     ++S  +AG GF+N+ LS S++ K +  ++V+GI+     I  
Sbjct: 80  NPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQDMLVNGIKTWAP-ILP 138

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    MHVGH R  ++GDTLA +  FS  EV R  ++ D G Q   L  
Sbjct: 139 VKRAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGDWGTQFGMLIQ 198

Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVK 234
            +F ++   ++       DL   Y           E  D+    ++     EE++     
Sbjct: 199 YLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAW- 257

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                 + +I R++   +    ++ + E      +P  I  +++ L  +G + E      
Sbjct: 258 ----NKICEISRNEFDMVYKLLNVKLEEKGESFYNP-FIPQVLEELNNKGLIKES----- 307

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                     +  +++F   + G  +   ++K DG + Y + DLA    +      + +I
Sbjct: 308 ----------EGAKVIF---IEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWII 354

Query: 354 YVMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           YV       +       A            K  + N +   LV L  DG   +   R+ +
Sbjct: 355 YVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLV-LGSDGK--RFRTRSTE 411

Query: 407 FITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSE 433
            + L  ++DE                                 VG  +V++  L      
Sbjct: 412 VVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLT 471

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F ++    K N   Y+QYA+AR  SI R++     +L             S    
Sbjct: 472 NYTFSFEQMLS-DKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAI-------SLDHP 523

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E  L ++L  +  V+E A     P  L  YLY+L+ +F   +++ +       V  +  
Sbjct: 524 DERVLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFYTNCQ-------VVGSPE 576

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +    RL L  A A ++     ++G+   
Sbjct: 577 E--TSRLLLCQATAVVMRQCFELLGITPV 603


>gi|187932062|ref|YP_001892047.1| arginyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691512|sp|B2SDQ4|SYR_FRATM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187712971|gb|ACD31268.1| arginyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 581

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/629 (21%), Positives = 244/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYVESFAKVVTSTR---EDVGHFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPVTVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    +D++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTVVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PINNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKAMTIASDLIGISIPERM 581


>gi|284161225|ref|YP_003399848.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011222|gb|ADB57175.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 548

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 151/611 (24%), Positives = 260/611 (42%), Gaps = 91/611 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F   +   LK I           +R V    ++  H  L+   A  L++    +P+
Sbjct: 1   MFQLFKRDVLKCLKRICED--------ERFV----KESDHADLACTIAFKLAKEQKRNPI 48

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A  I   ++    +  + +   G+IN + S  +L   +++I+ +   YG   +    K
Sbjct: 49  EVANEIAENLEPIGYIGKIEVVN-GYINFFASEEFLEDTINTILDTDENYGSLNMR--GK 105

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IE  SANP GP+H+GH R +++GD+LA +   +G++VT  YY+ND G QI    L   
Sbjct: 106 VLIEHTSANPDGPIHIGHMRNSIIGDSLARIFRKAGFDVTTHYYVNDMGRQIAIAVLGYR 165

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQA 240
                     D  + E Y           EL +K    L+   E     +V D+   V  
Sbjct: 166 LFGLDESKKPDHAVVEAYVKANQEIEKNPEL-EKEVEMLMIKYENFSDDVVGDFRYIVSK 224

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ IR  L+ LNI HD ++ E +F +     +  I+  L  +  +        K +   
Sbjct: 225 ALEGIRQTLRELNIHHDDYVWESEFLKN--GYVDRILSMLDERNLI--------KKEGAW 274

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             ++D K ++ R             + +G+  Y   DLAY   K E  F+  + V+G+DH
Sbjct: 275 FVELDEKPVILR-------------RENGTTLYITRDLAYHLWKNE-NFERFVNVLGADH 320

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
             Y ++L  +   ++ K     ++  E V L        MS R G FI+   ++      
Sbjct: 321 KLYGRQLCKLLELINLKPP--EIVFFEFVSLPEG----SMSTRKGKFISADELIAKVYDE 374

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                V   ++RF  +     + + FD+ K  +  ++    YVQ
Sbjct: 375 ARKIVEKRDLSREEKERIAKAVAMGAIRFDFVKIAPEKPMVFDWEKALDFERQ-TASYVQ 433

Query: 456 YAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           YA+ARC SI R+A +   PDL+F         +       E  L++ L+++P VIE    
Sbjct: 434 YAHARCCSILRKAVESGMPDLEF---------RPEICTKVERDLVMILSKFPYVIEKVIK 484

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A YL  +A+ F+  +   R       V     ++ M RL +V AV  ++ +GL
Sbjct: 485 DLKPNYVAEYLLSVANTFNDFYREHR-------VLDEVAEIRMHRLAIVDAVRIVLRNGL 537

Query: 575 NIIGVESPNEM 585
            ++G+E+   M
Sbjct: 538 ELLGIEALERM 548


>gi|331701595|ref|YP_004398554.1| arginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128938|gb|AEB73491.1| Arginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 563

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/607 (21%), Positives = 258/607 (42%), Gaps = 72/607 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++ N +  +        ++ ++  +E+P+  A G L+   A  L++     P  IA
Sbjct: 2   DYKAQVTNSILSVLNDELSSAEVYEK--LEKPKTLAMGDLAFP-AFSLAKVFHKAPNAIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +V +I      + V   G  ++N +L   ++  +IL+ ++  G  YG+N  GKG  V 
Sbjct: 59  QELVEKIDQS-SYEKVEAKGA-YLNFFLDKGNFSNEILNEVLEEGSAYGQNDSGKGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G+++A L+  +GY   ++ ++ D G Q   L ++   W
Sbjct: 117 IDMSSPNIAKPISMGHLRSTVIGNSIAKLLVKNGYHPIKDNHLGDWGTQFGKLIVAYKKW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIV-KDYSVQAM 241
             ++ +  +  +    YY   + +     EL D+         +     +    +  +  
Sbjct: 177 GNEEDVKKDPINNLVKYYVKFHNEDKEHPELDDEARETFKKLEDGNEEEVFLWKWFRKVS 236

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++      + L +  D +  E  ++      + + I  L  +G + E       S+  Q 
Sbjct: 237 LESFNKIYEKLGVTFDTYNGEAFYN----DKMDEGIQILKDKGLLVE-------SQGAQV 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
             +D+  L              +LKSDG+  Y   D+A    +         +YV+G++ 
Sbjct: 286 VKLDKYNL----------NPALILKSDGATLYITRDIATAIYRDRTYKPAMNLYVVGAEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           + Y ++L+AV   +    A+                          L E++    D    
Sbjct: 336 TYYFQQLKAVLLEMGLPSAENLHHIPFGLITVNGKKLSTRSGRIILLDEVLDDAIDLAKK 395

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++  +  D      V  EVG  ++ F  L  + +  +DF     + + +     YVQY++
Sbjct: 396 QIEAKNPDLPNKDEVAKEVGVGAIIFGDLKNERTNNIDFVLED-QLRFEGETGPYVQYSH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI R+A       D DL   N    +   D +  + +  L ++P V+++A    EP
Sbjct: 455 ARAESILRKAG------DIDLHGAN----KQLDDPAAWETVTALKDFPDVVKSACKDFEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
            ++A Y   LA  F+ +++H +       +   + +L   RL LV AV+ ++   LN++G
Sbjct: 505 SEIAKYALRLAKSFNKYYAHSK-------ILVEDDQL-AARLSLVKAVSIVLKESLNLLG 556

Query: 579 VESPNEM 585
           V++P+ M
Sbjct: 557 VKAPDAM 563


>gi|312873557|ref|ZP_07733604.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090810|gb|EFQ49207.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 558

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 249/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + A++ ++ +   +   G  +IN  +  + L  +    V++  +   +       V I
Sbjct: 57  SELAAKL-VNDNFAEIEAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDNNQGNVPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            ++A+  +       YY   + +       +          EE   + + + + +   ++
Sbjct: 175 NEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSL 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 235 QEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYDFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+A     D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|291166429|gb|EFE28475.1| arginine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 567

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/615 (20%), Positives = 230/615 (37%), Gaps = 84/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +   L+ I        +I    +IE P +   G  S      L++     P  IA
Sbjct: 2   NFKKLVYTLLQNILS---TNNEIDIESLIEVPANPEMGDYSF-PCFKLAKLYRKAPNLIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124
           E +V ++    + +S+  A  G+IN  ++   L K +   V+S  E YG++  GK   V 
Sbjct: 58  EDLVKQLPDTEEFESIK-AISGYINFTINKKLLAKQVIETVLSEKENYGKSDYGKHKNVI 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P H+GH R  V+G  L  +    G+      ++ D G Q   L ++    
Sbjct: 117 VEYSSPNIAKPFHIGHIRSTVIGHALDRIYQSVGFNTIAINHLGDYGTQFGKLIVAFKKW 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIV--KDYS 237
             +++   D   P      +Y+K      V  EL D+         E+K    V    + 
Sbjct: 177 GDRSVIEKD---PINELLKLYVKFHEEAEVHSELEDEAREWFRKLEEDKDPEAVQLWQWI 233

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +K        L I++D    E  +       +  II++L     +         S+
Sbjct: 234 RDISLKEFDKVYSMLGIEYDSLAGESFY----SDKMPAIIEHLENMNLL-------TDSQ 282

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +  D++   +              + K DGS  Y   DLA  K + +   F   IYV+
Sbjct: 283 GAKIVDLEEYGM----------PPALIKKKDGSTLYITRDLAAAKYRKDTYDFYKNIYVV 332

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD- 415
           G+    + K+ + V        A   + +        +G+   +S R G  + L  V++ 
Sbjct: 333 GAPQELHFKQWKKVHELSGYDWANDCIHVAFGTVSLEEGV---LSTRKGRVVFLEDVLNK 389

Query: 416 ------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   +VG  ++ F  L     +   F + +      E   
Sbjct: 390 AIEKTKDIIQQKNPNLENLDEVAKQVGVGAIVFQELSNTRIKDYTFSWDRALTFEGE-TG 448

Query: 452 FYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            Y QY +ARC S+  +A  D+  D+DF +   N            +++I  ++ +  V+ 
Sbjct: 449 PYTQYTHARCCSLLEKANVDLNTDIDFSILSTN---------NDAMKVIRIMSSFEDVLL 499

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 EP+ L  ++ D+   F+  +           +   N K  +  L LV A   +I
Sbjct: 500 RCAKKYEPHHLTRFVLDVCQAFNKFYHDN-------PILTANEKEKIAYLSLVQASQIVI 552

Query: 571 NSGLNIIGVESPNEM 585
            + L I+G+E+P +M
Sbjct: 553 KNALWILGMEAPRKM 567


>gi|301062427|ref|ZP_07203082.1| arginine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443468|gb|EFK07578.1| arginine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 399

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 229/425 (53%), Gaps = 26/425 (6%)

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           + RE+Y+NDAG QI  L  S++ R +Q   N +   PE  Y G Y+  +   +A +    
Sbjct: 1   MVREFYVNDAGLQIRMLGESIWARMKQK-ENPNFVFPENGYHGDYILDLADTIAKEIDLS 59

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             N  E   + +      + M+  I+  L    I  D++ SE+D H      +   +D++
Sbjct: 60  SKNPDE--AVALCAQDGKEMMLTEIQRALDRFRINFDVWSSEEDLHA--SGLLDQTLDSI 115

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +G++Y+                    +  +++  GDD DR + KSDG YTYFA+D+AY
Sbjct: 116 QAKGHLYD----------------REGAVWIKTSQFGDDKDRVIRKSDGQYTYFASDIAY 159

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              K+ RGF   I + G+DH GYV R++A   +    +  ++VLL +LV+L+ +G  ++M
Sbjct: 160 HLEKHRRGFTKAINIWGADHHGYVPRVKAALLSHGIPENWLSVLLIQLVKLWENGQELRM 219

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SKRAG F+TL+ ++DEVG D+ RF+ L + +   LD D   +K+Q  +NPV+YVQYA+AR
Sbjct: 220 SKRAGSFVTLQELLDEVGVDAARFVFLTKSHDSPLDVDMDLIKKQDSDNPVYYVQYAHAR 279

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             SI R+A          +        E      E+ +I  ++E+P ++E+ +   E ++
Sbjct: 280 ICSIIRKAASEG----IAVLDHIDGISEKLALKEEMAIIRTMSEFPALLEDISKTLEAHR 335

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L +YL  LA+ FH +++ G +N  LR V   ++ LT  RL LV  V  +I +GL ++GV 
Sbjct: 336 LTYYLTHLAASFHRYFNMGLKNSELRVV-TEDKTLTQARLILVSGVKIVIANGLRLLGVS 394

Query: 581 SPNEM 585
           +P +M
Sbjct: 395 APEKM 399


>gi|325479660|gb|EGC82752.1| arginine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 565

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 128/611 (20%), Positives = 233/611 (38%), Gaps = 75/611 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   +   ++  D  +  E+      +IE P     G  S      L++ +  +P  
Sbjct: 1   MTDFKEIIAKEIENKDIGLSFEEIYK---LIEIPPQDNMGDFSFP-CFTLAKTMRKNPAI 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTK 122
           IA+ +   ++I+     V  +   ++N +L    +   IL+ I+    +YG++ IG+G  
Sbjct: 57  IAKDLAETLEIEGI-SKVE-SLNAYLNFFLDRDKFETGILNEILEKKEDYGKSNIGEGKT 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSV 181
             ++F S N   P H+GH R  V+GD L ++  F GYE     YI D G Q    +A   
Sbjct: 115 RVLDFSSVNIAKPFHIGHIRSTVIGDALRNIQEFLGYETVASNYIGDYGTQFGTMIAAYK 174

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFP--EEKWLPIVKDYSV 238
            W     L  N        Y     +    E + +    E  N    EE+ + +   +  
Sbjct: 175 LWGDDDKLRENPIKELLNLYVRYNDEASKDEKMMENARKEFKNLESGEEEAVRLWSWFKE 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +  +  R   K L+I  D +  E          I  +I+ L  +  + E       S+ 
Sbjct: 235 ISFSEFDRV-YKLLDIDFDNYNGES----YHSEFIPAVIEELKEKNLLVE-------SEG 282

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG 357
               D+    L              ++KS+GS  Y   D+A    + +   FD  +YV+ 
Sbjct: 283 AYIIDLSDYDL----------PPSIIIKSNGSSAYITRDIATAINRKKVYDFDENLYVVA 332

Query: 358 SDHSGYVKRLEAVAAAVSEK-----------------------KAQINVLLCELVRLYRD 394
           +  + + ++L+A+   +                          K Q+ V L +++    D
Sbjct: 333 TQQNLHFQQLKAILEKMGYDFYKDCIHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAID 391

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                M  R      +      VG  +V+F  L+    +   FD+ +V     E    YV
Sbjct: 392 KTREIMEDRDSQIEDVEETSRIVGIGAVKFQELYNNRIKDYVFDWDEVLNFDGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR +S+ R+A         D                E  L+  LA +  V+  A  
Sbjct: 451 QYTYARAKSVLRKA---------DFSETKTKDFTKISSDEEFALVKSLANFKDVVIKACE 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  +  ++A  F+  ++  +       +  ++ +L   RL L +A + +I + L
Sbjct: 502 KYEPSLITRHTTEIAKNFNKFYNACQ-------INVDDERLKEERLALTYATSIVIKTAL 554

Query: 575 NIIGVESPNEM 585
            ++G+++  +M
Sbjct: 555 GLLGIKTVEQM 565


>gi|125550952|gb|EAY96661.1| hypothetical protein OsI_18575 [Oryza sativa Indica Group]
          Length = 606

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/629 (20%), Positives = 236/629 (37%), Gaps = 104/629 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLG-----L 59
             S  +   L+    +++V+       ++E       G    N AM L SR  G      
Sbjct: 27  QLSKLVIASLRTTVPEVEVDP------MVEVCT-AKFGDYQCNNAMGLWSRIKGSGTSFK 79

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  I + I   +     ++S  +AG GF+N+ LS S++ K +  ++V+GI+     I  
Sbjct: 80  NPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQGMLVNGIKTWAP-ILP 138

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    MHVGH R  ++GDTLA +  FS  EV R  ++ D G Q   L  
Sbjct: 139 VKRAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGDWGTQFGMLIQ 198

Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVK 234
            +F ++   ++       DL   Y           E  D+    ++     EE++     
Sbjct: 199 YLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAW- 257

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                 + +I R++   +    ++ + E      +P  I  +++ L  +G + E      
Sbjct: 258 ----NKICEISRNEFDMVYKLLNVKLEEKGESFYNP-FIPQVLEELNNKGLIKES----- 307

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                     +  +++F   + G  +   ++K DG + Y + DLA    +      + +I
Sbjct: 308 ----------EGAKVIF---IEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWII 354

Query: 354 YVMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           YV       +       A            K  + N +   LV L  DG   +   R+ +
Sbjct: 355 YVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLV-LGSDGK--RFRTRSTE 411

Query: 407 FITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSE 433
            + L  ++DE                                 VG  +V++  L      
Sbjct: 412 VVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLT 471

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F ++    K N   Y+QYA+AR  SI R++     +L             S    
Sbjct: 472 NYTFSFEQMLS-DKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAI-------SLDHP 523

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E  L ++L  +  V+E A     P  L  YLY+L+ +F   +++ +       V  +  
Sbjct: 524 DERVLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFYTNCQ-------VVGSPE 576

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +    RL L  A A ++     ++G+   
Sbjct: 577 E--TSRLLLCQATAVVMRQCFELLGITPV 603


>gi|222617773|gb|EEE53905.1| hypothetical protein OsJ_00455 [Oryza sativa Japonica Group]
          Length = 588

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/627 (19%), Positives = 232/627 (37%), Gaps = 101/627 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLG-----LD 60
              +L   +         +  +   + + +P     G    N AM + SR  G      +
Sbjct: 13  VEQQLCTLITSSLRATVPDLDVEPMLEVSKP---GFGDYQCNNAMSVFSRIRGSATNFRN 69

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ + + I   +     ++S+ +AG G+IN+ LS +++ + +  ++V GI+     I   
Sbjct: 70  PMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCGIKTWAP-ILPV 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  ++F S N    MHVGH R  ++GDTLA +  F+  EV R  ++ D G Q   L   
Sbjct: 129 KRAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGDWGTQFGMLIEF 188

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +F ++         D  +     V       + + K   +  +F E       +D    A
Sbjct: 189 LFEQFP--------DWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQAGGEDKYRAA 240

Query: 241 MMKIIRDDLKALNIQH---DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             KI +      ++ +   ++ + E      +P  I  +++ L  +G +           
Sbjct: 241 WKKICQISRMEFDLVYKRLNVKLEEKGESFYNPY-IPPVLEELTNKGLI----------- 288

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
                +    +++F      +D    ++K DG + Y + DLA    +      + +IYV 
Sbjct: 289 ----VESKGARVIF-----VEDHPLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVT 339

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQIN------VLLCELVRLYRDGMPIKMSKRAGDFITL 410
                 +   L   A        Q          +   + L  DG   +   R  + + L
Sbjct: 340 DVGQQRHFHMLFTAAKMAGWLPEQNGKKYPKASHVGFGLVLGSDGK--RFRTRCSEVVRL 397

Query: 411 RHVVDE---------------------------------VGSDSVRFMMLWRKNSELLDF 437
             ++DE                                 +G  +V++  L         F
Sbjct: 398 VDLLDEAKARSKAQLIKRFTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTF 457

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            F ++    K N   Y+QYA+AR  SI R+A         D+    +    +     E  
Sbjct: 458 SFDQMLS-DKGNTAVYLQYAHARICSIIRKA-------SKDVEKLKMTGAITLGHPYERF 509

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L +HL ++  V+E A    +P++L  YLY L+  F   +++ +       V  +  +   
Sbjct: 510 LGLHLIQFTEVVEQACADLQPHRLCDYLYSLSLTFSKFYTNCQ-------VVGSPEE--T 560

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNE 584
            RL L  A   I+    +++G+   ++
Sbjct: 561 SRLLLCEATGIIMRQCFHLLGITPVHK 587


>gi|309808155|ref|ZP_07702067.1| arginine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|312875062|ref|ZP_07735080.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|308168624|gb|EFO70730.1| arginine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|311089457|gb|EFQ47883.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 558

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 249/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + A++ ++ +   +   G  +IN  +  + L  +    V++  +   +       V I
Sbjct: 57  SELAAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDNNQGNVPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            ++A+  +       YY   + +       +          EE   + + + + +   ++
Sbjct: 175 NEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSL 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 235 QEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYNFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+A     D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|300813674|ref|ZP_07093996.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512216|gb|EFK39394.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 569

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 126/618 (20%), Positives = 242/618 (39%), Gaps = 89/618 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   + N L E      + K  ++R ++E P D   G  +      L++    +P  IA
Sbjct: 3   NFKEEIINILNENIE--GLNKDEIER-MVEIPPDYKMGDFAFPV-FSLAKIYRKNPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +I+       +      ++N ++    L +  L   +     +G++ IG+G  V 
Sbjct: 59  EELAKKIE-SKYFAKIENKSA-YLNFFIDKDILAEEVLKETIDKKENFGKSTIGRGKNVC 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH R  V+GD++  +  F GY      ++ D G Q   L  +   W
Sbjct: 117 VEYSSTNIAKPFHIGHIRSTVIGDSIKRIYQFLGYNTIAINHLGDYGTQFGMLIYAYKKW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             ++ +  N  D     Y  V       +   +         E +    V       + K
Sbjct: 177 GDKKKIEENPIDELLKLYVKVNTLAEEDKEVKEECRYWFKELENQNPEAV------EIWK 230

Query: 244 IIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  LK  N  + +   E D + G+      +  +I++L  +  + E       S+  
Sbjct: 231 WFKEVSLKEFNRVYKMLDIEFDSYNGESFYSDKMPALIEDLRNRNILEE-------SQGA 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMG 357
           +  ++D   L              ++KSDG+  Y   DLA  K ++E  + F   IYV+G
Sbjct: 284 EVINLDEYDL----------PPAIVVKSDGTTIYLTRDLAAAKYRHENYKPF-RSIYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           S  S + K+L+A             + +   +    DG    +S R G  +         
Sbjct: 333 SQQSLHFKQLKAALKKAGFDWYDEIIHVAFGMVSLEDGT---LSTRKGKVVYLEDVLNRA 389

Query: 409 --------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                   + + VG  +++F  L+ +  +   F++ K      E
Sbjct: 390 IEKVREILDQREEKTSRKIENKEELAEIVGIGAIKFQELFNQRIKDYVFNWDKTLSFEGE 449

Query: 449 NPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +   YVQY +AR  S+  + +  +    DF L               E+ ++ +L  +  
Sbjct: 450 S-GPYVQYVHARISSLLEKGEFSLDKKFDFSLLQGQ----------EEVDILRNLYNFTD 498

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+ +A    EPY +  Y+ +LA  F+  ++        R +  ++      RL L ++V 
Sbjct: 499 VVIDAHNKFEPYIITRYIVELAKNFNKFYTQ-------RPILVDDELTKNTRLLLCYSVK 551

Query: 568 SIINSGLNIIGVESPNEM 585
           ++I  GL+++G+++P +M
Sbjct: 552 NVIREGLDLLGIKAPEKM 569


>gi|297799374|ref|XP_002867571.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
 gi|297313407|gb|EFH43830.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 126/630 (20%), Positives = 236/630 (37%), Gaps = 91/630 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIER----PRDCAHGHLSTNAAMILSRP 56
           M    +F+  LK  L ++   + ++  + D   +E           G    N AM L   
Sbjct: 1   MAANEEFTGNLKRQLAKLF-DVSLKLTVPDEPSVEPLVAASALGKFGDYQCNNAMGLWSI 59

Query: 57  LG------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           +         P  + + +V  +     V+S  +AG GFIN+ LS  ++ K + +++++G+
Sbjct: 60  IKGKGTQFKGPPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLINGV 119

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +     +    +  ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D 
Sbjct: 120 DTWAPTL-SVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSNVEVLRRNHVGDW 178

Query: 171 GAQINTLALSVFWRYQQ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           G Q   L   +F ++            DL   Y    +   + ++  ++    ++    +
Sbjct: 179 GTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEDFKERAQQAVVRL--Q 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              P+ +  +   +  I R +   +  +  + + E      +P  I  +I+ L  +G V 
Sbjct: 237 GGDPVYRK-AWAKICDISRTEFAKVYQRLRVELEEKGESFYNPY-IAKVIEELNSKGLVE 294

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           E                +  +++F   + G D+   ++KSDG + Y + DL     +  E
Sbjct: 295 ES---------------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNE 336

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMS 401
              + +IYV       +       A                  +   + L  DG   +  
Sbjct: 337 EKAEWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGK--RFR 394

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            RA D + L  ++DE                             VG  +V++  L     
Sbjct: 395 TRATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRL 454

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               F F ++    K N   Y+ YA+AR  SI R++       D D   +         D
Sbjct: 455 TNYTFSFDQMLN-DKGNTAVYLLYAHARICSIIRKSGK-----DIDELRKTGKLALDHAD 508

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L +HL  +   +E A     P  L  YLY+L+  +   +S+ +       V  + 
Sbjct: 509 --ERALGLHLLRFAETVEEACTNLLPSVLCEYLYNLSEHYTRFYSNCQ-------VNGSP 559

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +    RL L  A A ++    +++G+   
Sbjct: 560 EE--TSRLLLCEATAIVMRKCFHLLGITPV 587


>gi|50284863|ref|XP_444859.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524161|emb|CAG57752.1| unnamed protein product [Candida glabrata]
          Length = 605

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/619 (21%), Positives = 230/619 (37%), Gaps = 79/619 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI           +E       G L       L R  G +P  IA
Sbjct: 27  NVVDLMRNYIAQELSKISGVDAAQIFPALEWTNTMDRGDLLIPVP-RLVRTKGSNPREIA 85

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
                +      ++ V  A   F+  +  P +L K  +  ++  G EYG   +    K+ 
Sbjct: 86  TEWAEKFPCGDFLEKVE-ANGAFVQFFFKPEFLYKTVIPDVITRGEEYGACKMVDNKKII 144

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IEF S N   P H GH R  ++G  L++L    G++VTR  Y+ D G Q   LA+  F R
Sbjct: 145 IEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKLGWDVTRMNYLGDWGKQFGVLAVG-FER 203

Query: 185 YQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEKW 229
           Y        +  P  +   VY+   K + +E             A +Y   + +   E  
Sbjct: 204 YGD--EEKLAKDPIHHLYEVYVRINKDIEEEGDSLPESESTNGKAREYFKRMEDGDPEA- 260

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L I K +   ++ K I D    LNI++D++  E    +     ++  +     +   +E 
Sbjct: 261 LKIWKRFRDFSIEKYI-DTYARLNIKYDVYSGESQVSK---ESMQTALKMFHEKNLTHE- 315

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER- 347
                          DR   L   T     + + ++ KSDG+  Y   D+     +YE+ 
Sbjct: 316 ---------------DRGATLIDLTKFNKKLGKVIVQKSDGTTLYLTRDVGAAMDRYEKY 360

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELV 389
            FD MIYV+ +    +  +   +   +    A                     V L  ++
Sbjct: 361 HFDKMIYVIATQQDLHTAQFFEILKQLGFDWANKLQHVNFGMVQGMSTRKGTVVFLDNIL 420

Query: 390 RLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
              ++ M   M K    +        V D VG  +V    +  K     +F + ++    
Sbjct: 421 EETKEKMHEVMKKNEAKYAQIDNPDEVADLVGISAVMIQDMQSKRINNYEFKWERMLSF- 479

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + +   Y+QYA++R RS+ R A +I  +                 + +   L+  L +YP
Sbjct: 480 EGDTGPYLQYAHSRLRSVERNAAEIPKE------KWASADFSQLKEPAAALLVRLLGQYP 533

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+ NA    EP  +  YL+ L       +        + +V     ++   RL L  A 
Sbjct: 534 DVLRNAMKTNEPATVVTYLFKLTHQVSSCYD-------VLWVAGQTEEVATARLALYGAA 586

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +G+ ++G+     M
Sbjct: 587 RQVLYNGMRLLGLTPVERM 605


>gi|309803439|ref|ZP_07697533.1| arginine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164448|gb|EFO66701.1| arginine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 558

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 127/611 (20%), Positives = 250/611 (40%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
             + A++ ++ +   +   G  +IN  +  + L    L  ++    +YG     +G    
Sbjct: 57  SELAAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDTNQGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +       YY   + +       +          EE   + + + + +   +
Sbjct: 174 GNEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++
Sbjct: 282 VVDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYDFAMSLYVAGNE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +           
Sbjct: 331 QSGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVK 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  +VG  +V F  L  +  +  DF+  +V  + + +   YV
Sbjct: 388 LALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     D    L            D     +   +A++P +I+ A  
Sbjct: 447 QYTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L
Sbjct: 496 KFEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESL 547

Query: 575 NIIGVESPNEM 585
            ++GV++P EM
Sbjct: 548 RLLGVDAPKEM 558


>gi|156552067|ref|XP_001604592.1| PREDICTED: similar to arginyl-tRNA synthetase [Nasonia vitripennis]
          Length = 670

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 127/624 (20%), Positives = 246/624 (39%), Gaps = 78/624 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL----- 57
           ++    +  +  + E              +VI    +   G    N+A+ L + L     
Sbjct: 84  IYDTLYTLFEKAIIEA-----YPDLTDPPVVISSSNNPKFGDYQCNSALPLCKLLGSASQ 138

Query: 58  --GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
              + P  IA+ I+ ++   P V+ + +AG GFIN+YL   + + IL++I+  G      
Sbjct: 139 GKKVSPREIADKIILKVASSPLVEKLEVAGAGFINIYLKREFGQAILANILKHGKVLSPP 198

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           ++ K  ++ ++F S N    MHVGH R  ++GD++A L+ F G++V R  +I D G Q  
Sbjct: 199 VVQK-RRILVDFSSPNVAKEMHVGHLRSTIIGDSIARLLEFLGHDVLRINHIGDWGTQFG 257

Query: 176 TLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
            L   +  ++      +   SDL   Y          +E   +  + ++     +   I 
Sbjct: 258 MLIAHLEDKFPNYTTESPPISDLQSFYKESKVRFDEDEEFKKRAYACVVKLQAHEPKYI- 316

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
              + + +  + R + +++  + DI + E          ++DI+  L  + ++ E     
Sbjct: 317 --QAWKLICDVSRKEFQSIYNRLDIKLIERGESFYHS-RMKDIVKELEEKNFLEE----- 368

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
                    D  RK +        + +   ++K DG +TY  +D+A  K +  E   + +
Sbjct: 369 ---------DEGRKIMW---GENREGIPLTIVKRDGGFTYDTSDMAAIKHRIVEEKAEWV 416

Query: 353 IYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           IYV+ +  + + + +E+ A  A +      I+ +    V L  D    K   R+GD + L
Sbjct: 417 IYVVDAGQATHFQIMESCARRARIVLSCHNIDFV-GFGVVLGEDKK--KFKTRSGDTVKL 473

Query: 411 RHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             ++DE                             +    +++  L    +    F F K
Sbjct: 474 SQLLDEGLKRAEQKLMEKERDKVLTKEEFNKAKESIAYGCIKYADLCHNRNHDYVFSFDK 533

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           + E  K N   Y+ YA  R RSI R A     ++   +    +    S     E +L   
Sbjct: 534 MTE-DKGNTAVYLLYALTRIRSIARTANVSREEMQEAIGKTPI----SLEHEKEWKLAKV 588

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L ++P VI   T     + L    Y++A  F   + +     + +       K+ M R+ 
Sbjct: 589 LLKFPDVILKITKDLCLHTLCELCYEIACAFTEFYDNCYCVEKNQT--GEIVKVNMGRIL 646

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L    A ++     ++G++   +M
Sbjct: 647 LTEVTAMMLEQCFALLGLKPVEKM 670


>gi|87300835|ref|ZP_01083677.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284706|gb|EAQ76658.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 610

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/614 (21%), Positives = 217/614 (35%), Gaps = 78/614 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A   + L+    E           LD   +        G    N A+ L+R L   P  I
Sbjct: 10  AQLRAALERAFPEEVAAAHRAGAPLD-PQLAPASQPEFGDFQANGALSLARRLKQAPRAI 68

Query: 65  AELIVARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN----- 115
           A  IV ++ +D       +   IAG GFINL L P  L   L S +              
Sbjct: 69  AGAIVEQLAVDTAFTELCEPAQIAGPGFINLTLRPRQLAAELRSRLGDQRLGVPEVSGAA 128

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                  V ++F S N    MHVGH R  ++GD LA ++ F G+ V R  ++ D G Q  
Sbjct: 129 TGAAAAPVIVDFSSPNIAKEMHVGHLRSTIIGDALARVLEFRGHPVLRLNHVGDWGTQFG 188

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL--PIV 233
            L   +     +AL   D+ +  G     Y +   +  AD+           K      V
Sbjct: 189 MLITHLKQVAPEALTTADA-VDLGDLVAFYRQAKARFDADEAFQATSREEVVKLQSGDPV 247

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
              + Q + +  R + + +  + DI +SE      +P  +  ++ +L   G +       
Sbjct: 248 SRRAWQLLCEQSRREFQQIYDRLDIRLSERGESFYNPY-LEQVVADLEASGLL------- 299

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-----ERG 348
                 Q   ++       S   G  +   + KSDG + Y   DLA  + ++       G
Sbjct: 300 VTDAGAQCVFLEGV-----SGKDGQPLPLIVRKSDGGFNYATTDLAALRYRFAAPPEGDG 354

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              +IYV  +  + +   +  VA       +  ++  +   LV+   DG   K+  R+GD
Sbjct: 355 ARRLIYVTDAGQASHFAAVFQVARRAGWVPEGGRLEHVPFGLVQ-GDDGK--KLKTRSGD 411

Query: 407 FITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELL 435
            + L+ +++E                               VG  +V++  L    +   
Sbjct: 412 TVRLKDLLEEAVERAEADLRRRLAEEERQEEEEFITHVATTVGLAAVKYADLSTNRNTNY 471

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F F ++   S  N   Y+ YA  R   I R+      + D      + +      +  E
Sbjct: 472 QFSFDRMLALS-GNTAPYLLYALVRIAGIARKGGVGAGEGDAAGVFPDPL---VFSEPQE 527

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L   L     VI        P +L  YL++L+ VF+  +       ++  ++A+    
Sbjct: 528 WALARQLLALDTVIAEVEEELLPNRLCSYLFELSQVFNRFYD------QVPVLKADEPA- 580

Query: 556 TMMRLQLVHAVASI 569
              RL L    A  
Sbjct: 581 RGSRLALCRLTADT 594


>gi|259501427|ref|ZP_05744329.1| arginine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190852|ref|ZP_07267106.1| arginyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|325911634|ref|ZP_08174042.1| arginine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329919661|ref|ZP_08276639.1| arginine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167176|gb|EEW51671.1| arginine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|325476620|gb|EGC79778.1| arginine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328937313|gb|EGG33737.1| arginine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 558

 Score =  368 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 127/611 (20%), Positives = 250/611 (40%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
             + A++ ++ +   +   G  +IN  +  + L    L  ++    +YG     +G    
Sbjct: 57  SELTAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDTNQGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +       YY   + +       +          EE   + + + + +   +
Sbjct: 174 GNEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++
Sbjct: 282 VVDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYNFAMSLYVAGNE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +           
Sbjct: 331 QSGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVK 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  +VG  +V F  L  +  +  DF+  +V  + + +   YV
Sbjct: 388 LALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     D    L            D     +   +A++P +I+ A  
Sbjct: 447 QYTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L
Sbjct: 496 KFEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESL 547

Query: 575 NIIGVESPNEM 585
            ++GV++P EM
Sbjct: 548 RLLGVDAPKEM 558


>gi|327542711|gb|EGF29180.1| arginyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 671

 Score =  368 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 145/687 (21%), Positives = 244/687 (35%), Gaps = 118/687 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M+L     +R    L+ +      +       +I    D   G   +NAAM L++ +G  
Sbjct: 1   MHLPNVLQARFVQALEPL-----TDSPSDYAGMIRPAADPKFGDYQSNAAMPLAKRVGKT 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              +A  +V  + +    +   +AG GFINL L  S L   +  +++     G +     
Sbjct: 56  SRDVAAELVQNLNVTDLFEEPEVAGPGFINLRLKDSVLFDSIQQMLLD-ERVGVSKTTDP 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178
            KV ++F S N   PMHVGH R  V+GD LA  + F G +V  + ++ D G Q   +   
Sbjct: 115 KKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTLRFYGEDVVTDNHLGDWGTQFGIIIYG 174

Query: 179 -----------------LSVFWR------YQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
                            LS  +R        Q    + + + +            KE++D
Sbjct: 175 YRNFGDPAKVAANPVPELSALYRLTNQLIEYQKAKQSLATMADKLATAKSDAETAKEVSD 234

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD---------IFISEDD-- 264
           +  S+    P++K        +    +  I  D+K+L  + D            SE    
Sbjct: 235 QSESDENLKPKDKKKLRKNAEAATRRVASIEADMKSLKAKIDAVDSDVELSNLASEHSDV 294

Query: 265 ----------FHRGDP--------------SPIRDIIDNLARQGY------VYEGILPPP 294
                      H GDP                I  I D L  Q         Y   L   
Sbjct: 295 DVAVLRETAKLHEGDPENLALWKEFLPHCQDEINRIYDRLNVQFDHTLGESFYHDRLAGV 354

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
               T      +        + G D    + K DG++ Y   DLA  + + +    D ++
Sbjct: 355 VDHLTTLGLTTKSDGAICVFLEGFDSPMIIQKRDGAFLYATTDLATLQYRRDEFHPDEIL 414

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ S    + K+  A+A  +   + Q+  +    V L  DG P  M  R+G  I L  +
Sbjct: 415 YVVDSRQGEHFKKFFAMAEPLGMGEVQLVHVNFGTV-LGPDGRP--MKTRSGSLIGLESL 471

Query: 414 V---------------------------------DEVGSDSVRFMMLWRKNSELLDFDFC 440
           +                                 + VG  ++++  L    +    FD  
Sbjct: 472 LNDAVSRAKEVVCNPDRLATMDPPMGGEEQQQIAEIVGIGAIKYADLSHHRTSDYKFDVD 531

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           K+    + N   YVQY+YAR +SI R+A   +  P  +  L         +    +E  L
Sbjct: 532 KMVAL-EGNTATYVQYSYARTQSILRRASDGEGLPTFEQALEQAAATQPMTFTHPNERSL 590

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + L  +   IE   +   P  L  YL++ A  +         N   R +  ++  +   
Sbjct: 591 ALMLMRFEEAIEQVRLNYAPNALCDYLFETAKTYSSF------NESCRVLGNDDPAVMQT 644

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL LV     ++  GL+++G++    M
Sbjct: 645 RLALVVLTGRVLKKGLSLLGIDVAERM 671


>gi|315653179|ref|ZP_07906104.1| arginine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489544|gb|EFU79181.1| arginine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 558

 Score =  368 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 249/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + A++ ++ +   +   G  +IN  +  + L  +    V++  +   +       V I
Sbjct: 57  SELAAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDNNQGNVPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            ++A+  +       YY   + +       +          EE   + + + + +   ++
Sbjct: 175 NEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSL 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 235 QEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYDFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+A     D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|297159433|gb|ADI09145.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 602

 Score =  368 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 128/629 (20%), Positives = 239/629 (37%), Gaps = 77/629 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L A    RL + L     +      +L        R         N  + L++ L  +
Sbjct: 5   LSLAATVHQRLADALSAALPEAGAADPLL--------RRSDRADFQANGMLALAKKLKGN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +V  +     +  + ++G GF+N+ +S   + K L++        G       
Sbjct: 57  PRELAAKVVESLPAGELIADIEVSGPGFLNITVSDEAIVKTLAARAAD-ARLGVPYAESP 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               +++   N    MHVGH R AV+GD +  ++ F+G +V R ++I D G Q   L   
Sbjct: 116 GTTVVDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFAGEKVVRRHHIGDWGTQFGMLIQY 175

Query: 181 VFWRYQQALYN---NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           +     +  +     D    +        +     L   Y +    F  ++     K+ S
Sbjct: 176 LLEHPHELDHKAATGDQGAGDDKDLAASGEEAMSNLNRLYKAARALFDSDEE---FKERS 232

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + ++ +   D + + + H  F+ E   +    S    +  ++     V E       ++
Sbjct: 233 RRRVVDLQAGDAETIALWH-RFVDESKIYFY--SVFDKLDMDIRDPDVVGESGYNDMLAE 289

Query: 298 TTQKCDMDRKQL-------LFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE- 346
           T +  +     +       +F   + G D   V   + KSDG + Y A DL+  + + + 
Sbjct: 290 TCRLLEESGVAVRSEGALCVFFEDVKGPDGNPVPLIVQKSDGGFGYAATDLSAIRDRIQN 349

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAG 405
              D+++YV+ +  S + K +   A  +     + +   L     L +DG P K   R G
Sbjct: 350 LQADSLVYVVDARQSLHFKMVFETARRIGWLNEKTHAYQLAFGTVLGKDGKPFK--TREG 407

Query: 406 DFITLRHVVDE------------------------------VGSDSVRFMMLWRKNSELL 435
           + + L  ++DE                              VG  +V++  L    +   
Sbjct: 408 ETVRLGDLLDEAIERATAVVREKSKGKIDLTEEEIAERGAQVGIGAVKYADLSTSAARDY 467

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD  ++   + +  V Y+QYAYAR +SI R A +           + V   E     +E
Sbjct: 468 KFDLDQMVSLNGDTSV-YLQYAYARIQSILRLAGE---------GQKPVAHPELPLAPAE 517

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L +HL ++  ++       EP+KLA YLY LAS +   +      P L+         
Sbjct: 518 RALGLHLDQFAEILREVAAGYEPHKLAAYLYQLASFYTTFYDKC---PVLKA--EGGPAQ 572

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNE 584
              RL L    A  ++ G++++G+ +P  
Sbjct: 573 VENRLFLCDLTARTLHQGMDLLGIRTPER 601


>gi|242399898|ref|YP_002995323.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259511659|sp|C5ZZZ3|SYR_THESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|242266292|gb|ACS90974.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 644

 Score =  368 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 143/666 (21%), Positives = 263/666 (39%), Gaps = 108/666 (16%)

Query: 4   FADFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + D  +++   LK I  ++  K  K     I+ +   +   G  +T  A +L++     P
Sbjct: 3   YDDIKAKVGELLKTIISEMLEKEGKTWEGEILFDETPNMEFGDFATTVAFLLAKVFKKAP 62

Query: 62  LTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIG 118
             IA+ I + +  K+   +  V +AG G+IN +L    + +  +  I+  G  +G + IG
Sbjct: 63  RIIAQEIASNLEDKLPEYIAKVEVAGAGYINFFLDYEKFSKLTVKEILQKGEHFGESKIG 122

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G KV +E  S NPT P+H+GH R AV+GDT+A +M   GY V  + YI+D G Q   + 
Sbjct: 123 EGKKVIVEHTSVNPTKPLHMGHARNAVLGDTVARIMRALGYNVEVQNYIDDLGVQFAQVL 182

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG---------------KELADKYSSELLN 223
              +   ++   +   +L E       +                    E+  +  S +  
Sbjct: 183 WG-YLNMREEFESIIKELKEKGLSKEDILDHALGLLYVEVHKKMEEYPEVEREIRSIMKE 241

Query: 224 FPEEKWL--PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             +E        +  +   +   ++     L+I +D+   E D  R       +    + 
Sbjct: 242 LEKEDNEISEKGRKLAEDVVKAQMKTTY-RLSISYDLLSWESDIVR--SGIFEESYKRIQ 298

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
              +         K     K       L        ++ D  L++SDG+ TY   D+AY 
Sbjct: 299 ENSHFEWAQEGKYKGAFIMKLGDLFPDL--------ENPDTVLIRSDGTATYTGKDIAYH 350

Query: 342 KCKYER---------------------------------GFDNMIYVMGSDHSGYVKRLE 368
             K+ +                                   + +I V+GS+       + 
Sbjct: 351 LWKFGKVSADMRYKVWDKINDHKTWTTAKDGERMPGRFANAEIVINVVGSEQRYEQMAVA 410

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--TLRHVVDE---------- 416
                +  ++   N        + R     K S R G +I  T+  V+DE          
Sbjct: 411 YALKLLGYEEEYHNFHHLAYEHVVR--PEGKFSGRKGTWIGFTVDEVLDEAVKRAKELVE 468

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            VG  +VR+ ++     +++ F +  V     E+   Y+QYA+A
Sbjct: 469 EKNPSLSGEEKEKIAEIVGVGAVRYNLVKYSPEKIITFRWEDVLNFEGES-APYIQYAHA 527

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           RC SI ++A +   ++D D   +N     S+ D  E +LI  ++++P +++ A    +P+
Sbjct: 528 RCASILKKAMEEGINIDKDALLKNA--DFSKLDNKEKELIKIISKFPEIVKTAGRDIKPH 585

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            LA Y  +LA VF+  +        L  ++A    +  +RL LV A   ++ + L ++G+
Sbjct: 586 LLATYANELAMVFNSFYMA------LPVLKAE-EGVRELRLLLVIATKQVLKNTLGLMGI 638

Query: 580 ESPNEM 585
           E+P  M
Sbjct: 639 EAPEVM 644


>gi|315230637|ref|YP_004071073.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183665|gb|ADT83850.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 647

 Score =  368 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 157/668 (23%), Positives = 259/668 (38%), Gaps = 109/668 (16%)

Query: 4   FADFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + D    +K  LKEI   +  K  K     I+ +       G  +T  A  L++     P
Sbjct: 3   YDDIKEEVKLILKEIISDMLEKEGKSWDGEILFDETPSMELGDFATTVAFQLAKVFRKAP 62

Query: 62  LTIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIG 118
             IA+ IV + K  +   +  V +AG G+IN +L    + + I+  I+  G +YG++ IG
Sbjct: 63  RIIAQEIVEKTKNKLPEYISKVEVAGAGYINFFLDYEKFGKLIIEEILTKGEKYGKSNIG 122

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV IE  S NPT P+H+GH R +++GDT+A +M   GY V  + YI+D G Q   + 
Sbjct: 123 KGKKVVIEHTSVNPTKPLHMGHARNSILGDTMARVMRTLGYNVEVQNYIDDLGIQFAQVM 182

Query: 179 LSVFWRYQQALYNNDSDLPEGY-------------YPGVYLKHVGKELADKYSSELLNFP 225
              +   ++      +++ E               Y  V+ K       +K   EL+   
Sbjct: 183 WG-YLNLKEEFEKIKAEIEERCIKENSIDHVLGLLYVEVHRKMEENPEVEKEVRELMKKL 241

Query: 226 EEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
           EE    I +      + ++K        LNI +D+   E D  R        I +   R+
Sbjct: 242 EEGDNEIAELGRRLAEEVVKAQMQTTYRLNIAYDLLSWESDIVRSG------IFEEAYRK 295

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
               E      + K      M    L        ++ D  L++SDG+ TY   D+AY   
Sbjct: 296 IEQNEHFEWAKEGKYKGAFIMKLGDLFPDM----ENPDMVLIRSDGTATYTGKDIAYHMW 351

Query: 344 KYER-------------------------------------GFDNMIYVMGSDHSGYVKR 366
           K+                                         D +I V+G++     K 
Sbjct: 352 KFGLVSADMLYKIWDRIMFEKKEHETWTTARDGKPMPGKFGHADIVINVIGAEQRYPQKV 411

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------------ 408
           +      +  ++A  N        + R     K S R G +I                  
Sbjct: 412 VAYALKLLGYEEAYRNFHHLAYEHVVR--PEGKFSGRKGTWIGFTVDEVVNEAVKRAKEL 469

Query: 409 -----------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                        + + + VG  ++R+ ML     +++ F +  V     E+   Y+QYA
Sbjct: 470 VEEKNPNLSEEEKKKIAEAVGIGAIRYNMLKYSPEKIITFRWEDVLNFEGES-APYIQYA 528

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +ARC SI R+A +   DL F+    N     S  D  E  LI  L+ +P +++      +
Sbjct: 529 HARCASILRKAMEKGIDLRFNNLLENA--DFSNLDRKEKDLIKLLSRFPEIVKEVGTEIK 586

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ LA+Y  ++A VF+  +         R            RL LV A   ++ + L ++
Sbjct: 587 PHLLAWYANEVAMVFNKFYMALPVLKAERGTLEE-------RLLLVMATKQVLRNVLYLM 639

Query: 578 GVESPNEM 585
           G+E+P  M
Sbjct: 640 GIEAPERM 647


>gi|318057995|ref|ZP_07976718.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318077002|ref|ZP_07984334.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 597

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 124/586 (21%), Positives = 221/586 (37%), Gaps = 66/586 (11%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A  +VA +     +  V ++G GF+N+ +    
Sbjct: 34  RRSDRADFQANGVLALAKKAKANPRELATQVVAALPDSTVIKDVEVSGPGFLNITVPDEA 93

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++   +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+
Sbjct: 94  ILRNLAARAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFT 153

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G  V R ++I D G Q   L   +     +   ++DS                  L   Y
Sbjct: 154 GETVIRRHHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEA----AMSNLNRVY 209

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +    F E++     KD + + ++ +   D + L   H        +       +    
Sbjct: 210 KASKALFDEDEG---FKDRARRRVVDLQAGDEETLAFWHRFVDESKVYFNALFGKLD--- 263

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-------LFRSTMVGDD---VDRPLLKS 327
            ++     V E       ++T    +     +       +F   + G D   V   + KS
Sbjct: 264 MDIRDADIVGESGYNDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVRKS 323

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
           +G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V L
Sbjct: 324 NGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAVQL 383

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
                L  DG P K   RAG+ + L  ++DE                             
Sbjct: 384 AFGTVLGADGKPFK--TRAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERGAQ 441

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A D      
Sbjct: 442 VGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSG---- 496

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++   +
Sbjct: 497 ---APAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTTFY 553

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                         N  ++   RL L       + +GL ++G+ +P
Sbjct: 554 DQCHVLS-----DDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAP 594


>gi|91773687|ref|YP_566379.1| arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121691659|sp|Q12V97|SYR_METBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91712702|gb|ABE52629.1| Arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 567

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 138/614 (22%), Positives = 255/614 (41%), Gaps = 78/614 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F DF  ++ + L +       E    D + +       H  LS+  A  L+      P 
Sbjct: 1   MFLDFIDQVTSILNDAVSSAGFEA---DDMELGP---SQHADLSSRIAFRLASVAKQSPK 54

Query: 63  TIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +AE I   I       V+ V   G  ++N++   +++   + +I      +G N     
Sbjct: 55  DVAEKIAGEIVIPKGSFVEKVEALGP-YLNIWAGRNFIEGTVLAIREQKEAFGGN--FSE 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +E  SANP GP+HVGH R +++GDTL  ++  +GY+V   YY+ND G QI  ++ +
Sbjct: 112 GRILLEHTSANPNGPLHVGHIRNSIIGDTLGRILKRAGYDVELHYYVNDMGRQIAIVSWA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--ELLNFPEEKWLPIVKDYSV 238
           + +         D  + + Y       +   E   +     +L+   +   +    D +V
Sbjct: 172 LGYFEFDESSKPDHAIADVYIKANAELNAHPEKVAEIDKLMQLVEKGDAATIETF-DKAV 230

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  I++ LK +N+ HD F  E  F R     +  II+ +   G              
Sbjct: 231 DLAVSGIKETLKKMNVAHDEFPKESSFIR--SGDVSRIIEEIKATG-------------- 274

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             + ++D   L+      G      + ++DG+  Y   DLAY + K ER  D +I V G+
Sbjct: 275 --RTEIDNGALVVNLQDYGFKKTLVIQRTDGTSLYTTRDLAYHEWKGER-ADRIIDVFGA 331

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH     +L+A   A+ +K+ +   ++ E V L        MS R+G FI+   ++D+  
Sbjct: 332 DHKLISGQLKATLNAIGKKEPEF--VIFEFVSLPEG----SMSTRSGKFISADDLLDQIK 385

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  +VR+ ++     +   FD+ +  +  K+   
Sbjct: 386 TQAYEEVDKRRPDMPDDFKATVAEIVGIGAVRYDIVKVSPEKSTVFDWKEALDFEKQG-G 444

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++QY++AR  SI ++AKD              I      + SE+ LI  +A +  +++ 
Sbjct: 445 PFIQYSHARACSILQKAKDEGL-----WSSEEPINTTLLVEDSEVSLIKKMAMFDNMLDQ 499

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P+  A Y  +LA  F+  +        +  + A + +L   R+ LV     ++ 
Sbjct: 500 CAKELRPHTFAIYARELADAFNQFY------RFVSVLNAEDEQLRSSRIALVDCARMVLA 553

Query: 572 SGLNIIGVESPNEM 585
           + L+ +G+ +P  M
Sbjct: 554 NTLDTLGLGAPESM 567


>gi|227543907|ref|ZP_03973956.1| arginyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300909654|ref|ZP_07127115.1| arginine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186108|gb|EEI66179.1| arginyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300893519|gb|EFK86878.1| arginine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 562

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 137/584 (23%), Positives = 236/584 (40%), Gaps = 80/584 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IERP+D ++G  +      L++ L   P  IA  +V ++  D   + V +AG  +IN +L
Sbjct: 27  IERPKDSSNGDYAFPTFF-LAKTLHKAPQMIASELVEKVDQDG-FEKVVVAGP-YINFFL 83

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  KIL +I+     YG   +G  + V I++ S N   PM +GH R  ++G+ +A 
Sbjct: 84  DKAQVGAKILQTILADPEHYGEIDLGHQSNVTIDYSSPNIAKPMGMGHLRSTMIGEAVAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           ++    Y + R  Y+ D G Q   L  +   W  +  +  +  +    YY  +  +    
Sbjct: 144 ILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPINTLLKYYVRINNEADEH 203

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
               +   +    L   +E+   +   +   ++ +  R   K L++  D F  E      
Sbjct: 204 PEYTEAGRDWFAKLEHGDEEAWRLWHWFREVSLERFQRV-YKMLDVNFDSFNGEAF---- 258

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + I  L  +  +         S+  +  D+D   L              ++KS+
Sbjct: 259 SAQKMEEPIQLLRDKNLL-------KPSRGAEIVDLDEYNL----------PPLLIIKSN 301

Query: 329 GSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLC 386
           G+ TY   DLA     K   G    +YV+G++   Y K+L A    +      QI  +  
Sbjct: 302 GTTTYITRDLATALFRKRMYGHAKSLYVVGAEQETYFKQLRAALKEMGFNWWDQIEHISF 361

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGSDS 421
            L+ L       KMS R G+ ++L  V++                         EVG  +
Sbjct: 362 GLMNL----NGKKMSTRKGNVVSLEDVLNDSIDLARKQIAEKNPDLENADEVAKEVGVGA 417

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V F  L       ++F    V +   E    YVQYA AR  SI R+        D DL  
Sbjct: 418 VIFHDLKNYRRNAVNFKLEDVVKFEGE-TGPYVQYARARAESILRKGGIRDFS-DVDLTN 475

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                      T   +LI  L +Y   I+ A +  +P  +A Y  +LA  F+ +++H R 
Sbjct: 476 AG---------TEAWELISFLGQYSEAIKRAALNYDPSVIAKYALELAKKFNQYYAHTRI 526

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +    RL L  AV+ ++ S LN++ +++P+EM
Sbjct: 527 L--------DKDEAQPARLALTQAVSDVLKSALNLLDIKAPDEM 562


>gi|282882268|ref|ZP_06290902.1| arginine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297889|gb|EFA90351.1| arginine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 569

 Score =  368 bits (945), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 127/618 (20%), Positives = 241/618 (38%), Gaps = 89/618 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   + N L E      + K  ++R ++E P D   G  +      L++     P  IA
Sbjct: 3   NFKEEIINILNENIE--GLNKDEIER-MVEIPPDYKMGDFAFPV-FSLAKIYRKTPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
           E +  +I+       +      ++N ++    L +  L   +     +G++ IG+G  V 
Sbjct: 59  EELAKKIE-SKYFAKIENKNA-YLNFFIDKDILAEEVLKETIDKKENFGKSTIGRGKNVC 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +E+ S N   P H+GH R  V+GD++  +  F GY      ++ D G Q   L  +   W
Sbjct: 117 VEYSSTNIAKPFHIGHIRSTVIGDSIKRIYQFLGYNTIAINHLGDYGTQFGMLIYAYKKW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             ++ +  N  D     Y  V       +   +         E +    V       + K
Sbjct: 177 GDKKKIEENPIDELLKLYVKVNTLAEEDKEVKEECRYWFKELENQNPEAV------EIWK 230

Query: 244 IIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  LK  N  + +   E D + G+      +  +I++L  +  + E       S+  
Sbjct: 231 WFKEVSLKEFNRVYKMLDIEFDSYNGESFYSDKMPALIEDLRNRNILEE-------SQGA 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMG 357
           +  ++D   L              ++KSDG+  Y   DLA  K ++E  + F   IYV+G
Sbjct: 284 EVINLDEYDL----------PPAIVVKSDGTTIYLTRDLAAAKYRHENYKPF-RSIYVVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------- 408
           S  S + K+L+A             + +   +    DG    +S R G  +         
Sbjct: 333 SQQSLHFKQLKATLKKAGFDWYDEIIHVAFGMVSLEDGT---LSTRKGKVVYLEDVLNRA 389

Query: 409 --------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                   + + VG  +++F  L+ +  +   F++ K      E
Sbjct: 390 IEKVREILDQREEKTSRKIENKEELAEIVGIGAIKFQELFNQRIKDYVFNWDKTLSFEGE 449

Query: 449 NPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +   YVQY YAR  S+  + +  +    DF L               E+ ++ +L  +  
Sbjct: 450 S-GPYVQYVYARISSLLEKGEFSLDKKFDFSLLQGQ----------EEVDILRNLYNFTD 498

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+ +A    EPY +  Y+ +LA  F+  ++        R +  ++      RL L ++V 
Sbjct: 499 VVIDAHNKFEPYIITRYIVELAKNFNKFYTQ-------RPILVDDELTKNTRLLLCYSVK 551

Query: 568 SIINSGLNIIGVESPNEM 585
           ++I  GL+++G+++P +M
Sbjct: 552 NVIRQGLDLLGIKAPEKM 569


>gi|269128153|ref|YP_003301523.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313111|gb|ACY99485.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 574

 Score =  368 bits (945), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 133/620 (21%), Positives = 236/620 (38%), Gaps = 84/620 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            AD    L+  L      +  +  +   I     R   H    ++AA+ L R LG +P  
Sbjct: 1   MADVEELLRRRLAPAFEAVAGD-PVDPAI-----RRSQHADYQSDAALALVRRLGGNPRD 54

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V R ++D     V I+G GFINL L    L ++L+  V      G         +
Sbjct: 55  IAARVVERAELDDLCAKVEISGPGFINLTLDNGALGRLLAE-VAGDERLGVARAEVAETI 113

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF- 182
            +++ + N    MHVGH R  ++GD    L+ + G+ V R+ ++ D G     L   +  
Sbjct: 114 TVDYSAPNAAKEMHVGHLRSTIIGDAAVRLLEWLGHTVIRQNHLGDWGTPFGMLVEHLLD 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQ 239
               +A +         +Y     K        + S +   LL   +E  L + +    +
Sbjct: 174 IGEAEAAHELSVGDLNTFYQAARRKFDADPAFQERSRKRVVLLQSGDEATLRLWRMLITE 233

Query: 240 AMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  K        L      D F  E  ++      +  +++ LA  G + E         
Sbjct: 234 S-QKYFLAVYDRLGATLGPDDFFGESYYN----DQLESVVEELAELGLLRES-------- 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMI 353
                  +  + +F +  +G D   +   + KSDG + Y A DLA  + +  +     ++
Sbjct: 281 -------EGAKCVFPAGFIGRDGKPLPLIVRKSDGGFGYAATDLATIRHRVRKLHATRLL 333

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+G     ++  +   A         +    +     L  DG  ++   RAG  + L  
Sbjct: 334 YVVGLPQQLHLGMVFQTAREAGWLTDPVRAEHIGFGSVLGSDGKILR--TRAGASVKLMD 391

Query: 413 VVDEV---------------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +++E                            G  +V++  L     +   FD+ ++   
Sbjct: 392 LLNEAVSRASAIIAEKNPELDEDARAAVARAVGIGAVKYADLSTDRVKDYVFDYDRMLSF 451

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QYA AR  SIFR+          ++ P   + +    + +E  L + L  +
Sbjct: 452 D-GNTAPYLQYARARICSIFRKG---------NIEPPRDVERVLIAEPAERALALQLLAF 501

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             +I       E ++LA YLY LA+ F   + +         +QA   ++   RL L   
Sbjct: 502 EGLINQVAQNLEFHRLAQYLYGLATAFTSFYENC------PVLQAEG-EVRTSRLVLCDL 554

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GLN++G+ESP++M
Sbjct: 555 TARTLERGLNLLGIESPDQM 574


>gi|309810103|ref|ZP_07703949.1| arginine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169602|gb|EFO71649.1| arginine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 558

 Score =  368 bits (945), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 249/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + A++ ++ +   +   G  +IN  +  + L  +    V++  +   +       V I
Sbjct: 57  SELAAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDNNQGNVPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            ++A+  +       YY   + +       +          EE   + + + + +   ++
Sbjct: 175 NEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSL 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 235 QEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+A     D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|302553259|ref|ZP_07305601.1| arginyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470877|gb|EFL33970.1| arginyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 585

 Score =  368 bits (945), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 119/586 (20%), Positives = 217/586 (37%), Gaps = 74/586 (12%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A  +V  +     +  V ++G GF+N+ ++   
Sbjct: 34  RRSDRADFQANGILALAKKEKANPRELATQVVGNVVSGDVIKDVEVSGPGFLNITVADRA 93

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++    G   G  L        +++   N    MHVGH R AV+GD L  ++ F+
Sbjct: 94  IIENLAARHADGERLGVPLKENAGITVVDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFT 153

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G +    ++I D G Q   L   +F    +     D D           +     L   Y
Sbjct: 154 GEKTIGRHHIGDWGTQFGMLIQYLFEHPGELAPAADVDG----------EQAMSNLNRVY 203

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +    F  ++         V A+    ++ L+        F+ E   +    S    + 
Sbjct: 204 KASRALFDADEEFKERARKRVVALQSGDKETLELWQ----QFVDESKVYFY--SVFEKLD 257

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--------LLFRSTMVGDDVDRPLL--KS 327
             +  +  V E        +T +  +             + F      DD   PL+  K+
Sbjct: 258 MEIRDEEIVGESAYNEGMPETARLLEEKGVAVRSEGALVVFFDEIRGKDDQPVPLIVQKA 317

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
           DG + Y A+DL   + + ++     ++YV+    S + + +   A         +    +
Sbjct: 318 DGGFGYAASDLTAIRNRVFDLKATTLLYVVDVRQSLHFRMVFETARRAGWLSEDVTAHNM 377

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418
                L  DG P K   R G+ + L  ++DE                           VG
Sbjct: 378 GYGTVLGADGKPFK--TREGETVRLEDLLDEAVQRAAEVVREKAQDLTEDEIQERAAQVG 435

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A +        
Sbjct: 436 IGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGE-------- 486

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              + V   E E   +E  L +HL  +   +  A     P+KLA YLY LAS++   +  
Sbjct: 487 --TKAVAHPELELAPAERALGLHLDAFGDTVFEAAAEYAPHKLAAYLYQLASLYTTFYDK 544

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                    ++A   +    RL L    A  ++ G+ ++G+ +P  
Sbjct: 545 C------PVLKAETPEQIENRLFLCDVTARTLHRGMGLLGIRTPER 584


>gi|302521100|ref|ZP_07273442.1| arginyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302429995|gb|EFL01811.1| arginyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 597

 Score =  368 bits (944), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 124/586 (21%), Positives = 221/586 (37%), Gaps = 66/586 (11%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A  +VA +     +  V ++G GF+N+ +    
Sbjct: 34  RRSDRADFQANGVLALAKKAKANPRELATQVVAALPDSAVIKDVEVSGPGFLNITVPDEA 93

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++   +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+
Sbjct: 94  ILRNLAARAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFT 153

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G  V R ++I D G Q   L   +     +   ++DS                  L   Y
Sbjct: 154 GETVIRRHHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEA----AMSNLNRVY 209

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +    F E++     KD + + ++ +   D + L   H        +       +    
Sbjct: 210 KASKALFDEDEG---FKDRARRRVVDLQAGDEETLAFWHRFVDESKVYFNALFGKLD--- 263

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-------LFRSTMVGDD---VDRPLLKS 327
            ++     V E       ++T    +     +       +F   + G D   V   + KS
Sbjct: 264 MDIRDADIVGESGYNDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVRKS 323

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
           +G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V L
Sbjct: 324 NGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAVQL 383

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
                L  DG P K   RAG+ + L  ++DE                             
Sbjct: 384 AFGTVLGADGKPFK--TRAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERGAQ 441

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L    S    FD  ++   + +  V Y+QYAYAR +SI R+A D      
Sbjct: 442 VGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSG---- 496

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++   +
Sbjct: 497 ---APAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTTFY 553

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                         N  ++   RL L       + +GL ++G+ +P
Sbjct: 554 DQCHVLS-----DDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAP 594


>gi|326334239|ref|ZP_08200462.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948030|gb|EGD40147.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 576

 Score =  368 bits (944), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 135/605 (22%), Positives = 245/605 (40%), Gaps = 62/605 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPR-DCAHGHLSTNAAMILSRPLGLDPLTIA 65
            S+ L++ +  + C       I   +   RP      GHL +N  + L+ PLGL P  I 
Sbjct: 8   LSAHLQDAV--VACFGDAHAGIDPEL---RPATRPEFGHLQSNLPLRLAGPLGLAPREIG 62

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             ++  + +  D+ +  +AG GF+NL  SP+ L + +  ++      G        +V +
Sbjct: 63  TRLLDAVDL-GDLATAELAGAGFLNLTWSPAVLGEAVGDLLTD-PHLGVPTPETPQRVVV 120

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ S N    MHVGH R  V+GD+LA ++ ++G++V R+ ++ D G Q   L        
Sbjct: 121 DYSSPNVAKQMHVGHLRSTVIGDSLARVLTYAGHDVVRQNHLGDWGTQFGMLV------- 173

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++ L  +  D      P         EL   Y      F ++          V A+    
Sbjct: 174 EELLGEDLHD------PAAVAGLDMSELLALYQRAKARFDDDPGFAASARRRVVALQSGD 227

Query: 246 RDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              L       +  ++E +  + R      RD  D  +R      G++   ++      +
Sbjct: 228 PTTLALWQALVEASLAEFETTYSRLGVLLTRDDFDGESRYNPQLPGVVDDLRASGL-LTE 286

Query: 304 MDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359
               Q+++     G D   +   + K+DG + Y A DLA  + + +    D ++YV+   
Sbjct: 287 SAGAQVVYPDGFAGRDGAPLPLIVRKADGGFGYAATDLATIRHRVDDLAVDRVVYVVDHR 346

Query: 360 HSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
            S +   + AVA A       + V  +     L  DG P K   R+G+ +TL  ++D+  
Sbjct: 347 QSHHFDMVFAVARAAGWLPDSVEVQHIGFGTVLGADGRPFK--TRSGETVTLTSLLDD-A 403

Query: 419 SDSV------------------RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
            ++V                  ++  L    +    FD  ++   + E    Y+QYA+AR
Sbjct: 404 EEAVAARYDNPEVVRAVANAAVKYADLSNHLARDYAFDLARMSATTGE-TGPYLQYAHAR 462

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             SI  QA    P   +           +    +E +L + L  +  V+       EP+ 
Sbjct: 463 VCSILAQA----PQQTYPPTGSGHRAVGTLSHPAEQRLALELTGFATVVAKVADTLEPHH 518

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YLY L++     + +    P L+     + ++   RL L  A   +++ GL ++G+E
Sbjct: 519 LTAYLYGLSTALTAFYENC---PVLK----ADGEVRQTRLALCEATRRVLSDGLRLLGIE 571

Query: 581 SPNEM 585
           +P  M
Sbjct: 572 APRRM 576


>gi|172058863|ref|YP_001815323.1| arginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229558758|sp|B1YFI1|SYR_EXIS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|171991384|gb|ACB62306.1| arginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 560

 Score =  368 bits (944), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 122/615 (19%), Positives = 237/615 (38%), Gaps = 85/615 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M     ++  L + + +   + ++E+      +IE+P+   HG L+      L++     
Sbjct: 1   MSYKQQYAQVLHDVIGDALSQEEIEQ------LIEQPKHEDHGDLAF-PCFQLAKAFRKA 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IA  +  +I  +P   +V  AG  ++N++L+   + + +   V+   +   +    G
Sbjct: 54  PMMIATELAEKID-NPLFSNVQAAGP-YVNVFLNREVVSREIIKRVLEEQQAYGSSELNG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +  +F S N   P  +GH R  V+G+ L  +    GYEV    ++ D G Q   L ++
Sbjct: 112 KTIVTDFSSPNIAKPFSMGHLRSTVIGNALNQISRKKGYEVVGINHLGDWGTQFGKLMVA 171

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDY 236
              W  ++ + +         Y   + +       +         L   +E+   +   +
Sbjct: 172 YNMWGKEEDVRSEPIKELLKLYVRFHEEAEENPGLEDEGRAWFKKLEQGDEQATALWTWF 231

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++++  R   + L +  D    E  ++      ++ +ID L  +  + E       S
Sbjct: 232 REVSLVEFSRV-YEMLGVSFDSLNGEAFYN----DKMQHVIDLLEEKDLLVE-------S 279

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
           +     D++ + +              + K DG+  Y   DLA    + E  GF+   YV
Sbjct: 280 EGAMVVDLEAEGM----------PPALIKKKDGATLYATRDLAAAVYRLETYGFEQAFYV 329

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414
           +G + + + K+L AV   +  +     +       + +DG   KMS R G  + L  V+ 
Sbjct: 330 VGGEQALHFKQLFAVLKKLGFENVD-GMHHVPFGLIMKDGK--KMSTRKGRIVLLEEVLQ 386

Query: 415 ------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                    EVG  +V F  L  +    ++FD  ++ +   E  
Sbjct: 387 DAINVAKQNIAEKNPNLANAEQTAREVGVGAVIFHDLKNERMNNIEFDLEQMLKFEGE-T 445

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY  AR  S+ R+        +               D     ++  L ++  VI+
Sbjct: 446 GPYVQYTNARANSLLRKGAYDGSAFNGSA------------DDYSWGVVSMLNQFSAVID 493

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   +EP  ++ Y+ DLA  F+ ++   R           +      RL LV +V  ++
Sbjct: 494 RAFTRREPSIISRYVLDLAQSFNKYYGQVRVL--------EDDAEKQSRLALVKSVTIVL 545

Query: 571 NSGLNIIGVESPNEM 585
             GL ++GV +P EM
Sbjct: 546 TEGLRLLGVGAPEEM 560


>gi|259503640|ref|ZP_05746542.1| arginine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168393|gb|EEW52888.1| arginine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 562

 Score =  368 bits (944), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 137/611 (22%), Positives = 246/611 (40%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   R+ + +      + +E+ I+D+  IERP+D  +G  +      L++ L   P  IA
Sbjct: 2   DEKQRVASAVAATLPDLSLEE-IVDK--IERPKDANNGDYAFPTFF-LAKTLHKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I      + V +AG  +IN +L  + +  +I+ +I+     YG+  +G G  V 
Sbjct: 58  ADLVEKIDQ-AGFEKVVVAGP-YINFFLDKAQVGAEIIKAILADPAGYGKKDLGHGANVT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W 183
           I++ S N   PM +GH R  ++G+ +A ++    Y   R  Y+ D G Q   L  +   W
Sbjct: 116 IDYSSPNIAKPMGMGHLRSTMIGEAIARILEKENYTPVRIDYLGDWGTQFGKLMAAYQMW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAM 241
             ++ +  +  +    YY  +  +            E     E       + +    Q  
Sbjct: 176 GSEEEVKKDPINTLLKYYVRINTEAEEHPEYTDAGREWFAKLEHGDKEAWRLWHWFRQIS 235

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  R     L++  D F  E          + D I  L  +  +         S+  Q 
Sbjct: 236 IERFRKVYDMLDVHFDSFNGEAF----SAQKMDDPIQLLKDKHLL-------KASRGAQI 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+D  +L              ++KS+G+ TY   DLA    +    G    +YV+G++ 
Sbjct: 285 VDLDAYKL----------TPPLIIKSNGTTTYITRDLATALYRKRMFGHAKSLYVVGAEQ 334

Query: 361 SGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
             Y K+L+AV   +      Q+  +   L+ L       KMS R G+ + L  V+++   
Sbjct: 335 ENYYKQLKAVLKEMGFTWWDQLEHISFGLMNL----NGQKMSTRKGNVVNLEDVLNDSIK 390

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L       ++F    V +   E    YV
Sbjct: 391 LARQQIAEKNPDLPNADEVAKQVGVGAVIFHDLKNDRRNAVNFKLEDVVKFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA AR  SI R+        DF           ++   +   ++  L++Y  V+E A +
Sbjct: 450 QYARARAESILRKGGVR----DFSAVDL------TKVGDAAWDILSFLSQYSDVVERAAV 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A Y  +L+  F+ +++H R           + +    RL LV AV+ I+   L
Sbjct: 500 NYDPSVIAKYALELSKKFNQYYAHNRIL--------QDDEGQTARLALVQAVSHILKDAL 551

Query: 575 NIIGVESPNEM 585
            ++ +++P+EM
Sbjct: 552 AMLDIKAPDEM 562


>gi|325913394|ref|ZP_08175761.1| arginine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477320|gb|EGC80465.1| arginine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 558

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 127/610 (20%), Positives = 247/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
             + A++ ++ +   +   G  +IN  +  + L    L  ++    +YG     +G    
Sbjct: 57  SELTAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDTNQGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
             ++A+  +       YY   + +       +          EE     V+   +  +  
Sbjct: 174 GNEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVS 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++      K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 234 LEEFNRIYKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYDFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+A     D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|326803379|ref|YP_004321197.1| arginine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650808|gb|AEA00991.1| arginine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 563

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 138/610 (22%), Positives = 245/610 (40%), Gaps = 84/610 (13%)

Query: 11  LKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +K ++ +I      +   LD++  V+E P+    G L+   A IL++ L   P  IA  +
Sbjct: 3   IKQHIAKIIQAEVSDYLSLDQVEDVLEVPKHEGQGDLAFP-AFILAKSLRQAPQKIASEL 61

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEF 127
             ++  D  +D V   G  +IN +L    +   + + ++     YG+  IG G  + I+ 
Sbjct: 62  AGKL-SDELIDHVEAVGP-YINFFLKADKISAAVLADILDKESAYGQLAIGDGENICIDM 119

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
            S N   PM +GH R  V+G+ + +++    ++  R  ++ D G Q   L ++ + ++  
Sbjct: 120 SSPNIAKPMSMGHLRSTVIGNAIGNIVEKVSFQPVRINHLGDWGTQFGKLIVA-YRKWGD 178

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
                 + + E     VY   +  E       + LN    +    ++      ++    +
Sbjct: 179 EETVRQNPIKELNRLYVYFHKMADE------DDSLNDEARQAFKELEGGNPEELELWQWM 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               L+     +D+   + D   G+      +  +ID L  +  +          +    
Sbjct: 233 REKSLEEFQSIYDLLGIDFDSMNGEAFYNDKMDAVIDELEEKDLL-------KIDQGATL 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDH 360
            D++   L+             + KSDG+  Y   DLA  F  K    FD  +YV+G++ 
Sbjct: 286 VDLEAYDLI----------PALVKKSDGATLYMTRDLAAVFYRKRTYDFDQCLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +       ++       + + G   K+S R G  + L  V+ E    
Sbjct: 336 SVHFKQLKAVIKEMGYDW-YDDIHHIPFGLITQGGK--KLSTRKGKVVLLESVLKEAIRL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V  Q +     YVQ
Sbjct: 393 AQKQINSKNPDLTDKDQVAEAVGVGAVVFHDLKNDRLNNFDFQLEEVV-QFEGETGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA AR +SI R+A    P LD               D     ++  L  +P +I  A  +
Sbjct: 452 YANARAQSILRKANAGKPRLD----------DLQLSDDESYAVVKQLNRFPEIIAKAYES 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y   LA  F+ +++H R       V   + +L   RL LV+AV+ ++  GL 
Sbjct: 502 YEPSVIAKYTLQLAQRFNKYYAHTR-------VLEEDDQL-NARLALVYAVSVVLTEGLR 553

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 554 LLGVQAPKEM 563


>gi|31747865|gb|AAN10190.1| argynyl tRNA synthetase [Candidatus Fritschea bemisiae]
          Length = 578

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 135/623 (21%), Positives = 244/623 (39%), Gaps = 86/623 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             + S  L+    +   KI      L  IV  +      GH   N+AM L++     P  
Sbjct: 1   MENLSEILQARATDSLKKILKSDAPLAEIV--QSTHPQFGHYQCNSAMELAKKTSRHPRE 58

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IAE IV    +D  V+ + +AG GF+N+ L   +L + L + + +    G + + K  K+
Sbjct: 59  IAEQIVKNWGLDERVEKLEVAGPGFVNITLKKEFLDQEL-NRLATDRRLGASPLKKRKKI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EF S N    +HVGH R  ++G++LA L  F G++V R  +I D G Q   L   +  
Sbjct: 118 IVEFSSPNIAKELHVGHLRSTIIGESLARLFEFLGHQVLRLNHIGDWGTQFGMLIAYLKE 177

Query: 184 RYQQALYNN-DSDLP---EGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYS 237
             ++ L     +DLP   + Y     L         +   E++N    E++ L +     
Sbjct: 178 FQKEVLSGEKKADLPALMDWYRESKKLFDTNPAFKKRAQIEVVNLQKKEKEALAVW---- 233

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + + +I R   + +    D+ + E    ++      +  +I+    +G +         
Sbjct: 234 -ETIREISRKGFQEIYDWLDVSLIERGESYYN---ETLPKVIEEYEAKGIIQIS------ 283

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDN 351
                    D  + +F     G D   +   L KSDG Y Y   D A    +      D 
Sbjct: 284 ---------DGAKCVFLEGFKGKDQAPLPLILQKSDGGYNYATTDTAALFQRIHIEKGDR 334

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFIT 409
           ++YV+ +    + + + A A        A++ +      V L  DG   K   R+G    
Sbjct: 335 ILYVVDAGQRLHFQMVFAAAFKAGYYDPARVEIEHVPFGVVLGADGK--KFKTRSGQTEK 392

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  ++ E                           +G +SV++  L     +   F++ ++
Sbjct: 393 LIDLLKEAVYRAKILLKNRLPSVEEKDLEKLAKILGINSVKYADLSCHRLKDYIFNYDRM 452

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+ Y+Y R + I  +      + + DL   +   Q      +E+ L + L
Sbjct: 453 LNF-EGNTAAYLLYSYVRIQGIKEKC-----NRNIDLLSHSARIQ--LTHPTEIALGLKL 504

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++   +        P +L+ YLY LA  FH  +   R       V+ + ++    RL L
Sbjct: 505 RQFGEALTLMDRDLLPNRLSDYLYHLAEKFHAFFRDCR-------VKGSPQE--DSRLLL 555

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               + I+  GL I+G+++ + M
Sbjct: 556 CELTSQILQKGLYILGLKTMDRM 578


>gi|229115688|ref|ZP_04245093.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228667830|gb|EEL23267.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 562

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 234/611 (38%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYEKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
           + I  ++  DP    V   G  ++N++ +   +   +L +I+    EYG+N  G    V 
Sbjct: 59  KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +    
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAY--- 173

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAM 241
                + N++ + E     ++  +V      K   E L      W   ++   + +V+  
Sbjct: 174 ---KKWGNEAVVKEDPIRELFKLYVQFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELW 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                + LK  +  +++   E    +G+                 Y  ++        + 
Sbjct: 230 NWFRHESLKEFSRIYELLGVEFTNFQGEA---------------FYNNLMEDFIGILEEH 274

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++  +      +  + +   L+ KSDG+  Y   DL     +     FD  +YV+G +
Sbjct: 275 ELLEESEGALVVNLEEEGMPPCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVGLE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +  +   V   +        +       + +DG   KMS R G  I L  V++E   
Sbjct: 335 QSLHFNQFFTVLKKLGYNWVD-GMEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAID 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L  +    ++F    + +   E    YV
Sbjct: 392 LAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  SI R+    F    F L            D     ++  L ++ +VIE A  
Sbjct: 451 QYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFRQVIEAAFN 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  ++ Y+ D+A  F+ ++ + R             K    RL LV+AV  ++  GL
Sbjct: 500 KNEPSIISKYVLDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGL 551

Query: 575 NIIGVESPNEM 585
            ++GVE+P EM
Sbjct: 552 RLLGVEAPEEM 562


>gi|312136309|ref|YP_004003646.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224028|gb|ADP76884.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 558

 Score =  367 bits (943), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 151/609 (24%), Positives = 268/609 (44%), Gaps = 81/609 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +   ++KN +      +      +  I +E P     G LSTN +  L+  LG++P+ IA
Sbjct: 2   EIEEKIKNSIVNALKDLNYP---VVDINLEEPPSKDLGDLSTNLSFKLASDLGMNPVDIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             IV  ++    +  V   G  +IN ++        L   +    E   NL  K  KV +
Sbjct: 59  NNIVNAMETPKYISKVETKGP-YINFFIDYDAFAPKLLKKI---DENYGNLKSKNKKVIL 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WR 184
           E  SANP GP+HVGH R A++GD+LA +M  +GY+V   YY+ND G Q+  +        
Sbjct: 115 EHTSANPNGPLHVGHLRNAIIGDSLARIMRAAGYDVETHYYVNDMGRQVAMVVWGALNLE 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSVQAMMK 243
           +++     D ++ + YY          ++ ++ +  +  + E +K    +    V+  ++
Sbjct: 175 FKKEKVKKDHEIGKIYYLANKALENDPKIENEVNKLMKKYEEGDKKTRKIFKNIVKKCLE 234

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I++ LK LNI+HD F+ E DF R   S I  II+ L    Y YE               
Sbjct: 235 GIKETLKNLNIEHDKFVWESDFVR--DSSIEKIIEKLKNTEYFYES-------------- 278

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +       G + +  L +SDG+  Y   D+AY   K  +  D +I V+GSDH   
Sbjct: 279 --EGAICLNLEKFGIEKELILKRSDGTSLYATRDIAYHFMK-SQNADIVIDVLGSDHKLT 335

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
            ++++ V   +  K  Q  ++  E + L        MS R G F+++  +++E       
Sbjct: 336 AEQVKTVMKIL--KSKQPEIIFYEFITLPNG----SMSTRKGTFVSVDELIEESKKRAIE 389

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               V   ++R+ +      + L F +  V +  K      +QY
Sbjct: 390 EIKKRRKDISESEMEKIAEIVSIGAIRYYIAKLSPEKHLTFKWEDVLDFEKG--CASIQY 447

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR   + ++AK    + + D +P N +         E+ LI  L+++P+++E A   +
Sbjct: 448 AHARACKLLKKAKYKEKEYEIDKWPLNDL---------EIDLIRILSKFPKIVETAAKTR 498

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           + +  A Y  +LA+ F+  + H      +  + + + K    RL LV      IN+ L +
Sbjct: 499 KIHMAAQYAQELANAFNRFYKH------VPVIGSEHEK---NRLVLVEKCKITINNCLKL 549

Query: 577 IGVESPNEM 585
           +G+++P+ M
Sbjct: 550 LGIKAPSSM 558


>gi|290958345|ref|YP_003489527.1| arginyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260647871|emb|CBG70976.1| putative arginyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 589

 Score =  367 bits (943), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 123/585 (21%), Positives = 219/585 (37%), Gaps = 67/585 (11%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A  +VAR++    +  + ++G GF+N+ L+   
Sbjct: 33  RRSDRADYQANGILALAKKAKANPRELATQVVARVESGELIGEIEVSGPGFLNITLTDRA 92

Query: 98  LRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           + + L++         G     +     I++   N    MHVGH R AV+GD +  ++ F
Sbjct: 93  ITQNLAARYADDTGRLGVPTAERPGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVQILEF 152

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           +G  V R ++I D G Q   L   +        + ++ D  +    G         L   
Sbjct: 153 TGENVVRRHHIGDWGTQFGMLIQYL------DEHPHELDHKDARVSGE---EAMSNLDRL 203

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRD 275
           Y +    F  ++         V  +       L       D   I            +RD
Sbjct: 204 YKAARKLFDSDEEFKTRARRRVVDLQAGDPHTLATWQKFVDESKIYFFSVFEKLDMEVRD 263

Query: 276 IIDNLARQGY-VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSY 331
             D +   GY            ++      +    +F   + G D   V   + KSDG Y
Sbjct: 264 A-DIVGESGYNDMLDETCRLLEESGVAVRSEGALCVFFDDVKGPDGNPVPLIVKKSDGGY 322

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCEL 388
            Y A DL+  + + +    ++++YV+ +  S + K +   A               L   
Sbjct: 323 GYAATDLSAIRDRVFHLKANSLLYVVDARQSLHFKMVFETARRAGWLNDDDVKAFQLAFG 382

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGS 419
             L +DG P K   R G+ I L  ++DE                             VG 
Sbjct: 383 TVLGKDGKPFK--TREGETIRLVDLLDEAIDRATAVVREKAEKVGLTEDEIVENGRYVGI 440

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L         FD  ++   + +  V Y+QYAYAR +SI R+A +  P      
Sbjct: 441 GAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGEAGP------ 493

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                   E E   +E  L +HL ++   +     + EP+KLA YL+ LA++    +   
Sbjct: 494 ----AAHPELELAPAERALGLHLDQFGEAVAEVAESYEPHKLAAYLFRLATLLTSFYDQC 549

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                   ++A +      RL LV   A  ++ G+ ++G+ +P++
Sbjct: 550 ------PVLKAESPAQVENRLFLVDLTARTLHRGMALLGIRTPDK 588


>gi|312868747|ref|ZP_07728939.1| arginine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095733|gb|EFQ53985.1| arginine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 562

 Score =  367 bits (943), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 137/611 (22%), Positives = 244/611 (39%), Gaps = 81/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   R+ + +      + +E+ I+D+  IERP+D  +G  +      L++ L   P  IA
Sbjct: 2   DEKQRVASAVAAALPDLSLEE-IVDK--IERPKDANNGDYAFPTFF-LAKTLHKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V +I      + V +AG  +IN +L  + +  +I+ +I+     YG+  +G G  V 
Sbjct: 58  ADLVEKIDQ-AGFEKVVVAGP-YINFFLDKAQVGAEIIKAILADPAGYGKKDLGHGANVT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I++ S N   PM +GH R  ++G+ +A ++A   Y   R  Y+ D G Q   L  +   W
Sbjct: 116 IDYSSPNIAKPMGMGHLRSTMIGEAIARILAKENYTPVRIDYLGDWGTQFGKLMAAYKMW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             ++ +  +  +    YY  +  +            E     E       + +     + 
Sbjct: 176 GSEEEVKKDPINTLLKYYVRINTEAEEHPEYTDAGREWFAKLEHGDKEAWRLWHWFRQIS 235

Query: 244 IIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           I R       L++  D F  E          + D I  L  +  +         S+  Q 
Sbjct: 236 IERFQKVYDMLDVHFDSFNGEAF----SAQKMDDPIQLLKDKHLL-------KASRGAQI 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+D  +L              ++KS+G+ TY   DLA    +    G    +YV+G++ 
Sbjct: 285 VDLDAYKL----------TPPLIIKSNGTTTYITRDLATALYRKRMFGHAKSLYVVGAEQ 334

Query: 361 SGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
             Y K+L+AV   +      Q+  +   L+ L       KMS R G+ + L  V+++   
Sbjct: 335 ENYYKQLKAVLKEMGFTWWDQLEHISFGLMNL----NGQKMSTRKGNVVNLEDVLNDSIK 390

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L       ++F    V +   E    YV
Sbjct: 391 LARQQIAEKNPDLPNADEVAKQVGVGAVIFHDLKNDRRNAVNFKLEDVVKFEGE-TGPYV 449

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA AR  SI R+        DF       +        +   ++  L +Y  V+E A +
Sbjct: 450 QYARARAESILRKGGIR----DFSNVDLTTVG------DAAWDILSFLGQYSDVVERAAV 499

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +A Y  +L+  F+ +++H R           + +    RL LV AV+ ++   L
Sbjct: 500 NYDPSVIAKYALELSKKFNQYYAHNRIL--------QDDEGQPARLALVQAVSHVLKDAL 551

Query: 575 NIIGVESPNEM 585
            ++ +++P+EM
Sbjct: 552 AMLDIKAPDEM 562


>gi|327400090|ref|YP_004340929.1| Arginyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315598|gb|AEA46214.1| Arginyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 557

 Score =  367 bits (943), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 144/615 (23%), Positives = 255/615 (41%), Gaps = 90/615 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F   +   L++ D        + +R V    R+  H  L+   A  L++ +   P 
Sbjct: 1   MFRQFRKDVIKSLQKFD--------VDERFV----RESEHADLACTIAFKLAKEMKKKPQ 48

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE IV+++ I+ D         G++N + S  +L   ++ I+ S  EYG   +  G +
Sbjct: 49  EVAEEIVSQLSIESDYIGSVEVVNGYVNFFASYEFLEDTINYILDSDEEYGSLAL--GGE 106

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IE  SANP GP+H+GH R +++GDTLA +   +G  VT  YY+ND G Q+    L + 
Sbjct: 107 VLIEHTSANPDGPLHIGHIRNSIIGDTLARIFRKAGVNVTTHYYVNDMGRQVALTVLGIE 166

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF------PEEKWLPIVKDY 236
                     D  + + Y           E  D+  +++          +E+   + +D 
Sbjct: 167 KFGLDKTEKPDHAVAKAYIAINRYIEEHPEEKDEIEAKVEELMKKYEEGDEETAKLFRD- 225

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V   ++  ++ L+ LNI HD ++ E +F R     +  II  L  +G +          
Sbjct: 226 AVSRALEGAKETLENLNIVHDEYVWESEFIRN--GYVDRIISMLDEKGLI---------- 273

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                            + +G   +  + + +G+  Y   DLAY   K E  F+  I V+
Sbjct: 274 -------QKDGAWTIDLSELGYKKNVVIRRENGTTLYVTRDLAYHLWKNE-NFERFINVL 325

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD- 415
           G+DH     +L  +   +  K     ++  E V L        MS R G FI+   ++D 
Sbjct: 326 GADHKLIGSQLSDILKLIGLKPP--EIVFFEFVSLPEG----SMSTRKGKFISADELIDR 379

Query: 416 ------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    V   ++R+  +     + + FD+ K  +  ++   
Sbjct: 380 VYREAYEIIKDRGFDEKEKRDVAKAVAIGALRYDFIRVAPEKPITFDWKKALDFERQ-TA 438

Query: 452 FYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            Y+QY++AR  SI R+A  +  PDL+F                 E +L++ L+++  VIE
Sbjct: 439 SYIQYSHARACSILRKAVSEGMPDLEF---------VGELCTPLERKLVMLLSKFSSVIE 489

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P   A Y+ D+A+ F+  ++          V     +  M RL +V A   ++
Sbjct: 490 RVVKELRPNVFAEYVMDVATTFNDFYTQH-------PVLKAEAEYRMHRLAIVDACRIVL 542

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++G+E    M
Sbjct: 543 RNGLEVLGIEPLERM 557


>gi|160893430|ref|ZP_02074215.1| hypothetical protein CLOL250_00980 [Clostridium sp. L2-50]
 gi|156864825|gb|EDO58256.1| hypothetical protein CLOL250_00980 [Clostridium sp. L2-50]
          Length = 563

 Score =  367 bits (943), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 116/610 (19%), Positives = 237/610 (38%), Gaps = 78/610 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++ N + +    +  E+       IE P     G  +      L++ +   P  IA 
Sbjct: 1   MKEKIVNLIADHVEGMTAEE---IATFIEIPPKQELGDYAF-PCFRLAKTMHKAPNLIAA 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I   I     +D + + G  ++N ++    +++ ++ + +     +G +  G    + I
Sbjct: 57  DIKEAIGDVDFLDKIDVQGA-YLNFFVKKDIFVQTMIEAALKDN--FGGSDEGADKVICI 113

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WR 184
           ++ S N     HVGH R  ++G++L  + +  GY+V R  ++ D G Q   L ++   W 
Sbjct: 114 DYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYKVIRINHLGDWGTQFGKLIVAYKNWG 173

Query: 185 YQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAM 241
            ++A+  +  ++L   Y           EL D+  +        +E+ L I + +   ++
Sbjct: 174 TKEAVEKDGVAELMRLYVKFHEEADKNPELVDEARAWFSKMEHGDEEALSIWQWFKDISL 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  +     L +  D ++ E  +        +D++D L     + E       S+    
Sbjct: 234 VEY-KRTYDLLGMDFDYYLGESFY----RDKCQDVVDQLTNANLLKE-------SEGAMI 281

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDH 360
            D+             D     + K DGS  Y   DLA  F  K    F   +YV G + 
Sbjct: 282 VDLSDY----------DMAPCIVTKKDGSSIYATRDLAAIFYRKNTYHFTKCLYVTGQEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
             +  ++  V   +    A+ +++      +  +G   K+S R+G+ I    ++ +    
Sbjct: 332 KLHFAQVFKVVELLGNDWAKDSLVHIPYGLVSLEGA--KLSTRSGNIIYAEDILHDAIKK 389

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  SV F  L+ +  + + F + KV     E    YVQ
Sbjct: 390 SFEIISEKSPNLPDKEEVAKIVGVGSVLFNDLYNQRIKDVSFSWDKVLNFDGE-TGPYVQ 448

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +ARC S+ R A++  P    D    +        +   + L+  +  +P+V+ +A   
Sbjct: 449 YTHARCSSVVRLAENFDPAKPVDYSTIS--------EPDAMNLLKEINRFPKVVSDAAEK 500

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +  D+A  F+  ++  R       +      +   R+ L +     ++  L+
Sbjct: 501 YEPSVVARFAVDVAQAFNKFYNSTR-------INVPEENVKNARVMLTYLTKKTLHDALD 553

Query: 576 IIGVESPNEM 585
           ++G+ +P  M
Sbjct: 554 LLGINAPEAM 563


>gi|312870867|ref|ZP_07730972.1| arginine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311093557|gb|EFQ51896.1| arginine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 558

 Score =  367 bits (943), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 127/611 (20%), Positives = 250/611 (40%), Gaps = 85/611 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
             + A++ ++ +   +   G  +IN  +  + L    L  ++    +YG     +G    
Sbjct: 57  SELTAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDTNQGNVP- 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W
Sbjct: 114 IDMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLW 173

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQA 240
             ++A+  +       YY   + +       +          EE   + + + + +   +
Sbjct: 174 GNEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVS 233

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q
Sbjct: 234 LQEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQ 281

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSD 359
             D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++
Sbjct: 282 VVDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNE 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408
            SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +           
Sbjct: 331 QSGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVK 387

Query: 409 --------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                             V  +VG  +V F  L  +  +  DF+  +V  + + +   YV
Sbjct: 388 LALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYV 446

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A     D    L            D     +   +A++P +I+ A  
Sbjct: 447 QYTNARAQSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFE 495

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L
Sbjct: 496 KFEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESL 547

Query: 575 NIIGVESPNEM 585
            ++GV++P EM
Sbjct: 548 RLLGVDAPKEM 558


>gi|294630717|ref|ZP_06709277.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834050|gb|EFF92399.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 590

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 130/625 (20%), Positives = 228/625 (36%), Gaps = 85/625 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L +    RL N L     +      +L        R         N  + L++    +P 
Sbjct: 7   LTSAVHQRLANALSAALPEAADADPLL--------RRSDRADFQANGILALAKKAKANPR 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGKGT 121
            +A  +VA++     +  + ++G GF+N+ +S   + + L++         G        
Sbjct: 59  ELATQVVAQVTAGDLIKDIEVSGPGFLNITVSDRAIVENLAARATDPAGRLGVPQADHPG 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I++   N    MHVGH R AV+GD L  L+ F+G  V R ++I D G Q   L   +
Sbjct: 119 TTVIDYAQPNVAKEMHVGHLRSAVIGDALVQLLEFTGESVVRRHHIGDWGTQFGMLIQYL 178

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSV 238
                     ++      +              D   K + +L +  EE      K  + 
Sbjct: 179 ----------DEHPHELDHKASEVSGDEAMSNLDRLYKAARKLFDSDEE-----FKTRAR 223

Query: 239 QAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPP 293
           + ++ +   D   + I      +  I            +RD  D +   GY         
Sbjct: 224 RRVVDLQAGDPHTVAIWQKFVDESKIYFFSVFEKLDMEVRDA-DIVGESGYNDMLAETCR 282

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGF 349
              ++      +    +F   + G D   V   + KSDG Y Y A DL+  + + +    
Sbjct: 283 LLEESGVAVRSEGALCVFFDDIKGPDGNPVPLIVQKSDGGYGYAATDLSAIRDRVFNLKA 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++YV+ +  S + K +   A         +    L     L +DG P K   RAG+ +
Sbjct: 343 STLLYVVDARQSLHFKMVFETARRAGWLGDDVTAHQLAFGTVLGKDGKPFK--TRAGETV 400

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L+ ++D                              VG  +V++  L         FD 
Sbjct: 401 KLQDLLDSAVERATAVVREKAEKVGLTEEEIVENGRYVGIGAVKYADLSTSAVRDYKFDL 460

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++   + +  V Y+QYAYAR +SI R+A +  P              E E   +E +L 
Sbjct: 461 DQMVSLNGDTSV-YLQYAYARIQSILRKAGEARP----------AAHPELELAPAERELG 509

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L  +   +     + EP+KLA YLY LAS+    +   +          N  ++   R
Sbjct: 510 LQLDRFGETVLEVAASYEPHKLAAYLYQLASLLTTFYDQCQVLSP-----DNAPEVVENR 564

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           L LV   A  ++ G+ ++G+ +P  
Sbjct: 565 LFLVDLTARTLHQGMTLLGIRTPER 589


>gi|309805389|ref|ZP_07699438.1| arginine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165316|gb|EFO67550.1| arginine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 558

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 124/610 (20%), Positives = 248/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + A++ ++ +   +   G  +IN  +  + L  +    V++  +   +       V I
Sbjct: 57  SELAAKL-VNDNFAEIEAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDNNQGNVPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            ++A+  +       YY   + +       +          EE   + + + + +   ++
Sbjct: 175 NEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSL 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 235 QEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+      D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKVNVEIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|325265599|ref|ZP_08132290.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982947|gb|EGC18568.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 567

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 121/599 (20%), Positives = 223/599 (37%), Gaps = 82/599 (13%)

Query: 10  RLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +L+  L  +I+            IV++  ++   G    N AM  ++    +P  +A+ I
Sbjct: 2   KLQQTLSAQIESAFAAAGVAGSPIVLQPAKNPDFGDFQINGAMGAAKAAKQNPRELAQKI 61

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +          +AG GFINL LSP +L   L   +                V I++ 
Sbjct: 62  ADELNGKGAFAVAEVAGPGFINLRLSPEFLAAQLEGSL------HIAQTPNPDTVVIDYS 115

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N    MHVGH R +++GD+LA ++ F G++V R+ ++ D G Q   L   +  + +  
Sbjct: 116 SPNLAKEMHVGHLRSSIIGDSLARVLGFLGHKVIRQNHVGDWGTQFGMLVAYLVEQQKDN 175

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIR 246
                +DL + Y             AD     ++     +E  L + + +   ++    +
Sbjct: 176 AAFELADLEQFYRAAKVRFDEDAAFADLSREYVVKLQGGDEAVLALWRQFVEISLQHAEK 235

Query: 247 DDLK-ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              K  L ++      E  ++      + +++  L  +G V                D D
Sbjct: 236 VYAKLGLLLERGDVAGESKYN----DDLHNVVKELEAKGLV---------------VDSD 276

Query: 306 RKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
             +++F        G+     + K  G + Y   DLA  + +      + ++YV+ +   
Sbjct: 277 GAKVVFLDEFKNKDGEPAAFIVQKQGGGFLYATTDLACLRYRLNMLKANRLLYVVDTRQD 336

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
            + K L   A         ++         + +D  P K   R+GD + L  ++DE    
Sbjct: 337 LHFKELFVTARKAGWLPENVSAEFVGFGTMMGKDNKPFK--TRSGDTVKLVDLLDEAVER 394

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V++  L +  +    FD+  +    + N   Y
Sbjct: 395 ATQLVRSKNPDLSEAEAAKIGQTVGIGAVKYADLSKNRTSDYVFDWDNMLSF-EGNTAPY 453

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R +S+FR+A D            +V       +  E QL V L ++  V+++  
Sbjct: 454 LQYAYTRVQSVFRKAGDW-----------DVQAAFVLTEPLEQQLAVELLKFEDVLQSVA 502

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               P+ LA YLY LA++F   +           ++A        RL L       + +
Sbjct: 503 ETNFPHYLAAYLYQLATLFSRFYEAC------PILKAEGAA-RDTRLNLARLTGETLKT 554


>gi|291536403|emb|CBL09515.1| arginyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 595

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 114/637 (17%), Positives = 231/637 (36%), Gaps = 97/637 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   + +       + K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKILDLITAEITQAFVDCGYDAKYGKVTLSNRPDLCE---YQCNGAMAAAKEYKKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ + A++              GF+NL L  ++L   ++ +      +G         +
Sbjct: 58  IADEVAAKLAEASMFSMTESVKPGFLNLKLDETFLASYVADMQADEGRFGCEKAENPKTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 118 MIDYGGPNVAKPLHVGHLRSAIIGESIKRIGKFVGHKVIGDVHLGDWGLQMGLIITELKL 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  + +Y +++      Y G Y K     +++          + K     K+ ++QA  +
Sbjct: 178 RQPELVYFDEN------YEGEYPKEAPFTISELEEIYPTASKKSKEDEAYKEAAMQATYE 231

Query: 244 II---------------------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +                      + + + LN+  +++  E D        I  ++  +  
Sbjct: 232 LQHGRKGYQALLSHILNVSVTDLKKNYENLNVSFELWKGESDAQPY----IPAMVQKMKD 287

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G+ Y        S      D+         T   +     +LKSDG+  Y   DLA   
Sbjct: 288 DGFAY-------VSDGALVVDVKE------DTDTKEIPPCMILKSDGASLYNTTDLATIV 334

Query: 343 CKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKM 400
            + E    D +IYV+      +  ++   A      K +  +  L       +DG P K 
Sbjct: 335 WREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLVKPETELKFLGFGTMNGKDGKPFK- 393

Query: 401 SKRAGDFITLRHVVDE--------------------------------VGSDSVRFMMLW 428
             R G  + L ++V E                                V   ++++  L 
Sbjct: 394 -TRDGGVMRLEYLVSEIDNEMLKKITENQKAKENLGISEEEAKETAKTVALAAIKYGDLS 452

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            + S+   FD  +     + N   Y+ Y   R +SI  +  D+  + D  +         
Sbjct: 453 NQASKDYIFDIDRFTSF-EGNTGPYILYTIVRIKSILHKYHDLGKNADNSVITAA----- 506

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                SE  L++ L+++  VIE A     P+K+  Y+YDLA+ F+  +         + +
Sbjct: 507 --HSESEKNLMLELSKFNAVIEGAFTDTAPHKICSYIYDLANAFNSFYH------ETKIM 558

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  +    ++L+    S++ + ++++G  +P  M
Sbjct: 559 SEEDETVQKSYIRLLELTKSVLETSIDLLGFSAPERM 595


>gi|227431637|ref|ZP_03913673.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352629|gb|EEJ42819.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 563

 Score =  366 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 126/607 (20%), Positives = 248/607 (40%), Gaps = 80/607 (13%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++   L  +   + +++       +E P+    G ++      L++ L   P  IA  IV
Sbjct: 6   QIVEALNAVLTDLTLQEISEK---LEAPKSSDLGDVAF-PTFTLAKTLHKAPQLIAADIV 61

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFV 128
           A I  +   + V   G  ++N +L        +   V      YG N+ G+G KV I+  
Sbjct: 62  AAIDQEG-FEKVVATGP-YVNFFLDKVATSNQVLKTVFDLEGAYGDNVDGQGAKVTIDMS 119

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQ 187
           S N   PM +GH R  V+G+ LA++ A +GY   +  ++ D G Q   L  +   W  ++
Sbjct: 120 SPNIAKPMSMGHLRSTVIGNALANITAKNGYAPVKINHLGDWGTQFGKLIYAYKAWGSEE 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKI 244
            + ++       YY   + K    +L +         L   +E+   + + +  ++ +K 
Sbjct: 180 EVKSDPIATLLKYYVEFHEKAKENDLLNDEGRAWFKKLEDGDEEAHRLWQWFRAES-LKE 238

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             +    L+I  D F  E  ++      +  ++D L  +  +                + 
Sbjct: 239 FSEIYDRLDITFDSFNGEAFYN----DKMDKVVDLLEEKNLL---------------VES 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
              Q++  S +  +     + +SDG+  Y   DLA    + E   F   +YV+G +   +
Sbjct: 280 QGAQIVDLSHINPNLTPAMIKRSDGATLYMTRDLAAALYRKETYDFAKSLYVVGGEQREH 339

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------- 415
             +++AV + +  + +     +   +  +      KMS R G+ + L+ V+D        
Sbjct: 340 FVQMKAVLSLMGFEWSDDTEHIAFGLITFNGK---KMSTRKGEVVLLKDVLDDAHELALK 396

Query: 416 -----------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                            EVG+ +V F  L    +   DF+  +V  + + +   YVQY  
Sbjct: 397 QIQEKNPALGDKYTVAEEVGAGAVVFHDLMNDRTNNFDFNLEEVV-RFEGDTGPYVQYTN 455

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +SI R+        D +L            D +   +I  L  +P+ ++ A   +E 
Sbjct: 456 ARAKSILRKTSVQLTSDDLNL-----------TDPATWDIITTLNNFPKTVQRAWQQREA 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y  +L+  F+ ++++ +       +   + +L   RL LV +V+ ++  GL ++G
Sbjct: 505 SIIAKYALNLSRAFNKYYANSK-------ILTEDAQL-NARLVLVKSVSIVLTEGLRLLG 556

Query: 579 VESPNEM 585
           V++P EM
Sbjct: 557 VKAPEEM 563


>gi|330718773|ref|ZP_08313373.1| arginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 553

 Score =  366 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 126/583 (21%), Positives = 245/583 (42%), Gaps = 77/583 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E P+    G ++      L++ L   P  IA  IVA I  +   + +   G  ++N +L
Sbjct: 17  LEAPKSSQLGDVAF-PTFTLAKALRKAPQQIAADIVATINQEG-FEKIVATGP-YVNFFL 73

Query: 94  SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              S  + ILS ++     +G N  G+   + I+  S N   PM +GH R  V+G+ LA+
Sbjct: 74  DKVSTSQDILSDVLSKKNTFGDNNDGQTANITIDMSSPNIAKPMSMGHLRSTVIGNALAN 133

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +   +GY+  +  ++ D G Q   L  +   W  ++ + ++       YY   + K    
Sbjct: 134 ITQKNGYQPVKINHLGDWGTQFGKLIYAYKTWGSEEEVKSDPIATLLRYYVEFHEKAKAD 193

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           E  +         L   + +   + + +  ++ +K   +    L+IQ D F  E  ++  
Sbjct: 194 ESLNDEGRAWFKKLEDGDAEAHELWQWFRNES-LKEFTEIYDRLDIQFDSFNGEAFYN-- 250

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +  ++D L  +  +                +    Q++  ST+  +     + +SD
Sbjct: 251 --DKMTQVVDLLNEKQLL---------------VESQGAQIVDLSTVDENLTPAMIKRSD 293

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   DLA    +     F   +YV+G +   + ++++AV + +  + A  +V    
Sbjct: 294 GATLYMTRDLAAALYRKNTYNFAKSLYVVGGEQREHFRQMKAVLSLLGFEWAD-DVEHIA 352

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSV 422
              +  +G   KMS R GD + L+ V+D+                         VG+ +V
Sbjct: 353 FGLITFNGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPTLANKDEVAEKVGAGAV 410

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
            F  L    +   DF   +V  + + +   YVQY  AR  SI R+A+    ++D      
Sbjct: 411 VFHDLMNDRTNNFDFSLEEVV-RFEGDTGPYVQYTRARALSILRKAQ---QEVDMASLSL 466

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +        D +   ++  L ++P V+  A   +EP  +A Y   L+  F+ ++++ R  
Sbjct: 467 D--------DQATWDVVTSLGQFPTVVRQAWQRREPSIIAKYALHLSRAFNKYYANSR-- 516

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +  +++     RL LV++VA ++   L ++GV++P EM
Sbjct: 517 ----ILNEDDQ--LNARLALVNSVAIVLEESLRLLGVKAPEEM 553


>gi|302535095|ref|ZP_07287437.1| arginyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443990|gb|EFL15806.1| arginyl-tRNA synthetase [Streptomyces sp. C]
          Length = 589

 Score =  366 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 127/620 (20%), Positives = 229/620 (36%), Gaps = 68/620 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S ++  + +       E    D ++    R         N  + L++    +
Sbjct: 1   MASVPSLASSVEQRVSDALASALPEAGAADPLL----RRSDRADFQANGILALAKKAKAN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  ++  +     +  V ++G GF+N+ +S   + + L++        G  L G  
Sbjct: 57  PRELAATVLEGLDKSGVIKEVEVSGPGFLNITVSDEAIIRTLAARAADD-RLGVPLNGSA 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I++   N    MHVGH R AV+G  +  ++ F+G +V R ++I D G Q   L   
Sbjct: 116 GTTVIDYAQPNVAKEMHVGHLRSAVIGAAMVEILEFTGEKVIRRHHIGDWGTQFGMLIQY 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +  +    +   G       +     L   Y +    F  ++         V  
Sbjct: 176 LLEHPHELDHKGGDEEASG-------EEAMSNLNRLYKASRALFDSDEEFKTRARARVVD 228

Query: 241 MMKIIRDDLKALNIQHD---IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +       L+      D   I+     F++ D       +   +    +        +  
Sbjct: 229 LQAGDPRTLELWQRFVDESKIYFY-SVFNKLDMDIQDPDVVGESGYNDMLVETCKLLEES 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                      + F      D    PL+  KSDG + Y A DL+  + +  +    ++IY
Sbjct: 288 GVAVRSNGALCVFFDEYKGPDGNPTPLIVQKSDGGFGYAATDLSAIRNRVTDLAATSLIY 347

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+ +  S + K +   A         +  V L     L +DG P K   R G+ + L  +
Sbjct: 348 VVDARQSLHFKMVFETARRAGWLNDGVKAVQLAFGTVLGKDGKPFK--TREGETVRLVDL 405

Query: 414 VDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           +DE                             VG  +V++  L    +    FD  ++  
Sbjct: 406 LDEAVERATAVVREKAEKVGLTEAEIVENGQYVGIGAVKYADLSTSAARDYKFDLDQMVS 465

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            + +  V Y+QYAYAR RSI R A D  P          V   E E   +E  L +HL  
Sbjct: 466 LNGDTSV-YLQYAYARIRSIMRNAGDRKP----------VAHPELELAPAERALGLHLDG 514

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  +IE A     P+KLA YLY L+S++   ++          ++A+  +    RL L  
Sbjct: 515 FGALIEEAAADYAPHKLAAYLYQLSSLYTTFYADC------PVLKADTPEQVENRLFLCD 568

Query: 565 AVASIINSGLNIIGVESPNE 584
             A  ++ G+ ++G+ +P +
Sbjct: 569 LTARTLSKGMALLGIRTPEK 588


>gi|257067855|ref|YP_003154110.1| arginyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256558673|gb|ACU84520.1| arginyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 588

 Score =  366 bits (941), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 123/603 (20%), Positives = 214/603 (35%), Gaps = 61/603 (10%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
                    E    D I+    R         NAAM L++ LG  P  IA  IVA + + 
Sbjct: 14  TAFAAAFGPEYAQADPII----RPSQFADFQCNAAMGLAKRLGRKPRDIAAEIVAAVDLA 69

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
              ++  IAG GF+N+ L   ++    + +       G     +   V +++ + N    
Sbjct: 70  DIAETPEIAGPGFLNIRLRTDWVAAQAAELTAPSAALGVPAPERAQTVVLDYSAPNVAKE 129

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MHVGH R  VVGD++A  +   G+ V R+ +I D G     L   +    + +       
Sbjct: 130 MHVGHLRTTVVGDSIARTLEKLGHTVVRQNHIGDWGTPFGMLIEHLLEVGEDSAEAELLK 189

Query: 196 L-PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             P  +Y     K    E A        +F       +    S  A    I  +L  L+ 
Sbjct: 190 TDPNAFYQAARAKFDAAEAAGAADDGS-DFASRARARVATLQSGDAESLRIWTNLVELSK 248

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           Q+        +   D +   + +   +        +    ++    +   D    +F + 
Sbjct: 249 QYFH----RIYDMLDVTLTDEHLAGESTYNDQLAAVCDDLEAAGIARI-SDGALCVFPAG 303

Query: 315 MVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAV 370
             G D   +   + KSDG Y Y   DLA  + +  + G D + YV+GS    +   +   
Sbjct: 304 FTGRDEQPLPLIIRKSDGGYGYATTDLAALRHRVRDLGADRIGYVVGSAQELHFTMVFTS 363

Query: 371 AAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGD----------------------- 406
           A        Q+     ++   L  DG  ++   R+G                        
Sbjct: 364 AREAGWLPEQVEAEHVKIGSVLGEDGKILR--TRSGSSLRLMALLEEAVAAARTVIDELR 421

Query: 407 ----FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                     +  ++G   V++  L   +     FD  ++   +  N   Y+QYA AR R
Sbjct: 422 PDLPEAEREQIAHDIGIGGVKYADLSTAHDSDYTFDLDRMLALT-GNTAPYLQYAVARIR 480

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A                 P     + +E  L + L E+   + +     EP++L 
Sbjct: 481 SIGRKAA---------AQGVAAAPAPHVENDAERALALQLLEFGPTLVSVGAEFEPHRLC 531

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ LA  F   +           ++  + ++   RL L      ++  GL+ +GV +P
Sbjct: 532 AYLFSLAQAFTSFYEAS------PILKEADEQVRAGRLALAELTERVLVEGLDALGVNAP 585

Query: 583 NEM 585
            +M
Sbjct: 586 QQM 588


>gi|312872199|ref|ZP_07732272.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092283|gb|EFQ50654.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 558

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 124/610 (20%), Positives = 248/610 (40%), Gaps = 83/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           DF   +   + ++     + K+ ++  +IERP++   G  +      L++    +P  IA
Sbjct: 2   DFKQEVVETIAKVVS---LPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIA 56

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + A++ ++ +   +   G  +IN  +  + L  +    V++  +   +       V I
Sbjct: 57  SELAAKL-VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDNNQGNVPI 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           +  S N   PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W 
Sbjct: 115 DMSSPNIAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            ++A+  +       YY   + +       +          EE   + + + + +   ++
Sbjct: 175 NEEAVKKDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSL 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  R   K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q 
Sbjct: 235 QEFNRI-YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQV 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDH 360
            D+D            D+    +LKSDG+  Y   DLA     K E  F   +YV G++ 
Sbjct: 283 VDLDD-----------DENPALILKSDGTSLYITRDLAAALYRKKEYDFAMSLYVAGNEQ 331

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------ 408
           SG+ K+L+ V   +     + ++       + ++G   K+S R G+ +            
Sbjct: 332 SGHFKQLKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKL 388

Query: 409 -------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                            V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQ
Sbjct: 389 ALEQIEAKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQ 447

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+      D    L            D     +   +A++P +I+ A   
Sbjct: 448 YTNARAQSILRKVNVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEK 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L 
Sbjct: 497 FEPSVIAKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLR 548

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 549 LLGVDAPKEM 558


>gi|56707608|ref|YP_169504.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670079|ref|YP_666636.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456678|ref|ZP_03665151.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370125|ref|ZP_04986131.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874428|ref|ZP_05247138.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81597851|sp|Q5NHI8|SYR_FRATT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|123063558|sp|Q14IZ0|SYR_FRAT1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56604100|emb|CAG45099.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320412|emb|CAL08482.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568369|gb|EDN34023.1| hypothetical protein FTBG_01229 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840427|gb|EET18863.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158765|gb|ADA78156.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 581

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 132/629 (20%), Positives = 243/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L   L ++  K+   +     +   R       H   N AM L++     
Sbjct: 1   MNI----ENYLSETLAKVFQKLGYAESFAKVVTSTREDVR---HFQCNGAMPLAKFAKKP 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IAE IV  I  +     + +A  GFIN+ L+P +L    +  + S  ++G       
Sbjct: 54  PLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  +  F G  V  + ++ D G Q+  L   
Sbjct: 113 RKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLP 231
           +  +  Q +Y +++      Y G Y        +ELA+      K     +N  E+  L 
Sbjct: 173 IKLQSPQLVYFDEN------YTGEYPTESPVTVQELAEIYPRASKRCKSDINEMEKARLA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  +  ++ D  +L++  D+++ E D ++     I ++I  
Sbjct: 227 TFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANK----FIDEMISY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FQANNFIYE----------------DEGAWVIDTNKDGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  +K ++  +    V   +DG 
Sbjct: 326 TLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEKCKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  +                    ++++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLADLISQAKEYAKNRMPDENDDSIINQIAMATIKFGDLINNYANDYF 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R +SI R+      D+        V+   +E++    
Sbjct: 443 FDLEKFA-QHEGKTGPYLLYTVVRAKSILRKIFGDNYDIKSLAKDYKVVNAHNEYEEK-- 499

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L + L ++P  ++ A    +P+ +  Y Y LA+ F+  + +            ++  L 
Sbjct: 500 -LQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNC------PINNLDDESLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    ++IG+  P  M
Sbjct: 553 KARIALCMATVKAMTIASDLIGISIPERM 581


>gi|319654711|ref|ZP_08008790.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393627|gb|EFV74386.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 562

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 136/614 (22%), Positives = 241/614 (39%), Gaps = 88/614 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F +     L  +      ++ I D  +IE P++ AHG L+      L++     P +IA
Sbjct: 3   NFKAIFTAQLASVLNGQLSDEAIAD--LIETPKNPAHGDLAF-PCFTLAKAFRKSPASIA 59

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVN 124
               A +   P ++    AG  +IN++ S      ++   I+  G EYG+   G G    
Sbjct: 60  GE-TACLIQGPHIEKAEAAGP-YINIFFSKESAGAVIMEKILNEGKEYGQLNDGAGKTAV 117

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           ++F S N   P  +GH R  V+G+ L SL    GY   R  ++ D G Q   L  +   W
Sbjct: 118 LDFSSPNIAKPFSMGHLRSTVIGNALGSLAEKCGYTAVRINHLGDWGTQFGKLITAYTKW 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
                +  N    P      +Y++       +  ++  L      W   ++  +   QA+
Sbjct: 178 GSPDKVKEN----PIKELLSLYIRFH----EEAEANPALEDEARSWFKELENGNEQAQAL 229

Query: 242 MKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
               R++ LK     +D+     D + G+      +  +I+ L  +  + E       S 
Sbjct: 230 WSWFREESLKEFQRVYDMLGIHFDSYNGEAFYNDKMEPVIEELMAKDLLAE-------SD 282

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +   +  + L              + KSDG+  Y   DLA    + E   FD+ +Y++
Sbjct: 283 GAEVVQLPDEDL----------PPCLIKKSDGATLYATRDLAAAFYRKETYQFDHSLYIV 332

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G + S + +++++V   +  + A  N+         +DG   KMS R G  I L  V++E
Sbjct: 333 GQEQSIHFRQVKSVIKKMGYEWAD-NMTHVPFGLYLKDGK--KMSTRKGRVILLEEVLNE 389

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  ++ F  L       ++F    +     E   
Sbjct: 390 AILLAKTNIEAKNPGLENKDEVAEAVGIGAILFHDLKNDRMNNIEFSLEDMLTFEGE-TG 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QY  AR  S+ R+A DI    +               D+   ++I  L +YP  I  
Sbjct: 449 PYLQYTNARAYSLLRKADDIPSAENG------------LSDSYSWEIIKLLYQYPEKIRQ 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           + +   P  LA YL D+A  F+ ++   R   +   ++         RL LV AV  +++
Sbjct: 497 SYMQLSPSVLAKYLIDVAQAFNKYYGQVRILEKDNSIK--------SRLALVKAVTIVLS 548

Query: 572 SGLNIIGVESPNEM 585
            G+  +G++ P +M
Sbjct: 549 DGMQTLGMKVPRQM 562


>gi|227513564|ref|ZP_03943613.1| arginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083437|gb|EEI18749.1| arginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 568

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 135/608 (22%), Positives = 260/608 (42%), Gaps = 74/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++ N +  +        ++ ++  +E+P+  + G L+   A  L++     P  IA
Sbjct: 7   DYKAQVTNSILSVLNDELSSAEVYEK--LEQPKSLSMGDLAF-PAFSLAKVFHKAPNQIA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V++I      + V   G  +IN +L    +  ++L++I+  G  YG+N  GKG  V 
Sbjct: 64  ADLVSKIDQ-TSYEKVEAKGA-YINFFLDKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVP 121

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G+++A L+  +GY   ++ ++ D G Q   L ++   W
Sbjct: 122 IDMSSPNIAKPISMGHLRSTVIGNSIAKLLVKNGYHPIKDNHLGDWGTQFGKLIVAYKKW 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPE--EKWLPIVKDYSVQA 240
             +  +  +  +    YY   + +     EL D+         +  E+   + K +   +
Sbjct: 182 GNEDDVKKDPINNLVKYYVKFHKEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVS 241

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++        L +  D F  E  ++      + + I  L  +G + E       S+  Q
Sbjct: 242 -LESFNKIYDKLGVTFDTFNGEAFYN----DKMDEGIQILKEKGLLVE-------SQGAQ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
              +D+ +L              +LKSDG+  Y   D+A    +         +YV+GS+
Sbjct: 290 VVKLDKYKL----------NPALILKSDGATLYITRDIATAIYRDRTYKPAMNLYVVGSE 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + Y K+L+AV   +  + A+                          L E++    +   
Sbjct: 340 QTYYFKQLKAVLLEMGLQSAENLHHIPFGLITVNGKKLSTRSGRIILLDEVLDDAINLAK 399

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++  +  D      V  EVG  ++ F  L  + +  +DF      +   E    YVQY+
Sbjct: 400 KQIEAKNPDLEDKDEVAKEVGVGAIIFGDLKNERTNNIDFVLEDQLKFEGE-TGPYVQYS 458

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI ++A      +DF    + +       D +  + +  L E+P V+E+A    E
Sbjct: 459 HARAESILKKA----SSIDFHTTDKEL------DDPAAWETVTALNEFPHVVESACKDFE 508

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P ++A Y   LA  F+ +++H +       V   + KL   RL LV +V+ ++   LN++
Sbjct: 509 PSEVAKYSLKLAKAFNKYYAHSK-------VLVEDDKL-GARLALVKSVSIVLKESLNLL 560

Query: 578 GVESPNEM 585
           GV++P+ M
Sbjct: 561 GVKAPDAM 568


>gi|328883223|emb|CCA56462.1| Arginyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 591

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 130/626 (20%), Positives = 233/626 (37%), Gaps = 78/626 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S ++  L +       +    D ++    R         N  + L++ L  +
Sbjct: 1   MASVPSLASTVQQRLADGLSAALPDAASADPLL----RRSDRADFQANGILALAKQLKGN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +VA I  +  +  + ++G GF+N+ ++ + + + L++        G       
Sbjct: 57  PRELATQVVAAIPENDVLKDIEVSGPGFLNITVTDAAIVRTLAARAAD-ARLGVPFNESA 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I++   N    MHVGH R AV+G  +  ++ F+G  V R ++I D G Q   L   
Sbjct: 116 GTTVIDYAQPNVAKEMHVGHLRSAVIGAAMVEILEFTGETVVRRHHIGDWGTQFGMLIQY 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +       L + D D  E     V  +     L   Y +    F  ++         V  
Sbjct: 176 LIEH-PHELDHKDEDGAE-----VSGEEAMSNLNRLYKASRALFDSDEEFKTRARARVVD 229

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPP- 294
           +       L         F+ E   +      + D +D   R G V     Y  +L    
Sbjct: 230 LQAGDERTLALWQ----RFVDESKIYFY---SVFDKLDMDIRDGDVVGESGYNDMLTETC 282

Query: 295 --KSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RG 348
               ++      +    +F   + G D       + KSDG + Y A DL+  + + +   
Sbjct: 283 RILEESGVAVRSEGALCVFFDDVKGPDGNPTPLIVQKSDGGFGYAATDLSAIRDRVQNLK 342

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDF 407
             +++YV+ +  S + K +   A         +  V L     L +DG P K   R G+ 
Sbjct: 343 ATSLLYVVDARQSLHFKMVFETARRAGWLNEDVKAVQLAFGTVLGKDGKPFK--TREGET 400

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           + L  ++DE                             VG  +V++  L    +    FD
Sbjct: 401 VRLVDLLDEAVDRATSVVREKAEKVGLTESEIVENGQYVGIGAVKYADLSTSAARDYKFD 460

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++   + +  V Y+QYAYAR +SIF +A D  P          V   E E   +E  L
Sbjct: 461 LDQMVSLNGDTSV-YLQYAYARIKSIFGKAGDRTP----------VAHPELELAPAERAL 509

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +HL ++   + +A     P+KL  YLY LAS++   +                +++   
Sbjct: 510 GLHLDQFAETVSDAATEYAPHKLTAYLYQLASLYTTFYDQCPV-----IKPEPAQEVAEN 564

Query: 559 RLQLVHAVASIINSGLNIIGVESPNE 584
           RL L    A  ++ G+ ++G+ +P  
Sbjct: 565 RLFLCDLTARTLHQGMALLGIRTPER 590


>gi|256074367|ref|XP_002573497.1| arginyl-tRNA synthetase [Schistosoma mansoni]
 gi|238658677|emb|CAZ29729.1| arginyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 629

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 115/589 (19%), Positives = 226/589 (38%), Gaps = 67/589 (11%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLG--LDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89
           + +  P   + G    N+A+ + +      +P  IA+ IVA + ++  ++ V +   GFI
Sbjct: 73  VQLSVPTKRSFGDYQCNSALSIRKESNNDQNPFDIAKSIVAALPVNDLIEKVDVVPPGFI 132

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+++   ++   +  I++ G+      I     V ++  S N    MHVGH R  ++G++
Sbjct: 133 NIWIKQRFISNEVRKILLHGVTPP--FIPHKYSVIVDMSSPNIAKEMHVGHLRSTIIGES 190

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YL 206
           ++ L++F G++V +  ++ D G Q   L   +   Y            + +Y      Y 
Sbjct: 191 ISRLLSFLGHKVLKLNHLGDWGTQFGMLIAHLKEIYPDHKTAPPISDLQAFYKTSKTRYD 250

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           +          +   L   + +++   K     +  K   D    L I++ I   E  + 
Sbjct: 251 EEKDFNQRAHMAVVKLQQNDPEYVHAWKQICDIS-RKEFDDVYHRLGIENLIERGESFYQ 309

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
               S + + +++L  Q  + E                D  +L+        +V   ++K
Sbjct: 310 ----SRMEEFVNDLKSQNVLQE----------------DEGRLILWPPK--CEVPLTVVK 347

Query: 327 SDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           SDG +TY  +DL     + +E   D ++YV+    S ++  + A A  +      ++ + 
Sbjct: 348 SDGGFTYDTSDLTALLQRLHEEKADWVLYVVDMGQSVHLNTVFAGAEMLGYYNPNVHKVQ 407

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
                +       K   R+GD + L  ++DE                             
Sbjct: 408 HIGFGVVLGEDKKKFKTRSGDTVRLVDLLDEGLERAKNRLLEKERNKELTEAEFERAQKA 467

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           V    +++  L    +    F F ++ +  K N   Y+ YAY R RSI R A      ++
Sbjct: 468 VAYGCIKYADLSHSRTIDYVFSFDRMLD-DKGNTAVYLLYAYTRIRSIIRNAGYSEKTIN 526

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                  +I +       EL L   L   P ++         + L  YLYDL+  F   +
Sbjct: 527 EISKTVPLIFE----HPMELTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCDFTNFY 582

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    R  +  + ++   R+ L  A A ++  G +I+G+E+  +M
Sbjct: 583 DACYCIE--RNQETGDVQINKERIVLCEATARVMKCGFDILGIETVEKM 629


>gi|11498499|ref|NP_069727.1| arginyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334362|sp|O29368|SYR_ARCFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2649707|gb|AAB90346.1| arginyl-tRNA synthetase (argS) [Archaeoglobus fulgidus DSM 4304]
          Length = 549

 Score =  366 bits (940), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 146/611 (23%), Positives = 262/611 (42%), Gaps = 90/611 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F   +   L E   K  +             R+  H  L++  A  L++     P 
Sbjct: 1   MFLRFIEEVIKALGEYGDKKFL-------------RESEHADLASTIAFKLAKERKKSPK 47

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ IV  ++++ +      +  G+IN + S  +L   ++ I+     YG   +    +
Sbjct: 48  EIADEIVENLEVESEYIGSVESVNGYINFFASYEFLEDTVNVILDEDENYGHLNL--KGE 105

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + IE  SANP GP+H+GH R +++GDT+A + A +G++V   YY+ND G Q     L + 
Sbjct: 106 ILIEHTSANPDGPLHIGHIRNSIIGDTIARIFAKAGFDVKTHYYVNDMGRQTAITVLGI- 164

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQA 240
            ++       D  + E Y     L     EL ++    +L + E  EK +   +  +V+ 
Sbjct: 165 EKFGLKDKKPDHAVAEAYIEANKLLESNPELEEQVEKLMLAYEEGDEKTVEKFRR-AVET 223

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ I+  LK +N++HD F+ E +F R     +  ++  L  +G V        K     
Sbjct: 224 ALEGIKQTLKTINVEHDEFVWESEFVRN--GYVGKVLGILEERGLV--------KKNGAW 273

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +++           G D +  L + +G+  Y   DLAY   K E  ++  I V+G+DH
Sbjct: 274 TIELE-----------GFDKEVVLRRENGTTLYITRDLAYHMWKNE-NYERFINVLGADH 321

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
             Y  +L  +   +  K     ++  E V L        MS R G FI+   ++      
Sbjct: 322 KLYGAQLSKILELLGLKPP--EIIFFEFVSLPEG----SMSTRRGKFISADELISKVRDE 375

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                              D V   ++RF  +     + + FD+ K  +  ++    Y+Q
Sbjct: 376 AWKILSERDMEEDEKRKIADAVAVGAIRFDFIKIAPEKHMTFDWSKALDFERQ-TASYIQ 434

Query: 456 YAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           Y++AR  SI R+A +D  P+L+F                 E +L++ L++ P V++    
Sbjct: 435 YSHARACSILRKAVEDGMPELEFKG---------ELCTAGERKLVMLLSKMPYVVKRIVS 485

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P   A YL  +A  F+  +   R++P L+       ++ M RL +V A   ++ +GL
Sbjct: 486 ELRPNVFAEYLLSVAGTFNDFY---RDHPVLK----AESEVRMHRLAIVDATRVVLRNGL 538

Query: 575 NIIGVESPNEM 585
            ++G+E    M
Sbjct: 539 ELLGIEPLERM 549


>gi|170017359|ref|YP_001728278.1| arginyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|229470720|sp|B1MZ82|SYR_LEUCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169804216|gb|ACA82834.1| Arginyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 563

 Score =  366 bits (939), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 129/606 (21%), Positives = 246/606 (40%), Gaps = 80/606 (13%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +   L ++   I V +       +E P+    G ++      L++ L   P  IA  IV 
Sbjct: 7   IITSLSQVLPDIPVAEIAAK---LESPKSSDLGDVAFP-TFTLAKLLRQAPQQIASDIVN 62

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           RI    + + V   G  ++N +L      +  L +I+  G  +G N  G G  V I+  S
Sbjct: 63  RIDQS-NFEKVVATGP-YVNFFLDKKMTSQATLKTILTQGAAFGDNNDGDGANVTIDMSS 120

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQA 188
            N   PM +GH R  V+G+ LA++ A +GY   +  ++ D G Q   L  +   W  +  
Sbjct: 121 PNIAKPMSMGHLRSTVIGNALANITAKNGYHPIKINHLGDWGTQFGKLIYAYKTWGTEAE 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKII 245
           +  +       YY   + K    +  +         L   +E+   +   +  ++ +K  
Sbjct: 181 VKADPIATLLRYYVEFHEKAKIDDSLNDAGRAWFKKLEDGDEEAHQLWTWFRAES-LKEF 239

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    L I  D F  E  ++      +  ++D LA +  +                +  
Sbjct: 240 TEIYDRLEISFDSFNGEAFYN----DKMDKVVDMLAEKSLL---------------VESQ 280

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
             Q++  S +  +     + ++DG+  Y   DLA    + E   F   +YV+G +   + 
Sbjct: 281 GAQIVDLSDINPNLTPAMIKRTDGATLYMTRDLAAAVYRKETYNFAKSLYVVGGEQREHF 340

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---------- 414
            +++AV + +    A  +V       +  +G   KMS R GD + L+ V+          
Sbjct: 341 VQMKAVLSLMGFDWAD-DVEHIAFGLITFNGK--KMSTRKGDVVLLKDVLNDAHDLALKQ 397

Query: 415 ---------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                          ++VG+ +V F  L    +   DF+  +V  + + +   YVQY  A
Sbjct: 398 IQEKNPDLADKATVAEQVGAGAVVFHDLMNDRTNNFDFNLEEVV-RFEGDTGPYVQYTNA 456

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R +SI R+A                + + +  DT+   +I  L ++P +++ A   +E  
Sbjct: 457 RAKSILRKANTAVS-----------VDELNLDDTATWDIITTLNQFPTIVQRAWQQREAS 505

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y   L+  F+ ++++       + +  +++     RL LV AV  I++  L ++GV
Sbjct: 506 IIAKYALSLSRAFNKYYANS------KILLPDDQ--LNARLALVKAVTIILSESLRLLGV 557

Query: 580 ESPNEM 585
           ++P EM
Sbjct: 558 KAPEEM 563


>gi|293570628|ref|ZP_06681679.1| arginyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291609299|gb|EFF38570.1| arginyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 563

 Score =  366 bits (939), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 125/610 (20%), Positives = 247/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +    I  +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDIVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKI 244
           A+       P      +Y++    E+A+      LN     W   ++   + ++Q     
Sbjct: 181 AVKAE----PINELLRLYVQF--HEVAETEPE--LNEEARAWFKRLEEGDEEAIQLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + +K  N  +D+   + D   G+      + +I++ L  +  + E        K  + 
Sbjct: 233 RDESMKEFNKIYDLLEVQFDSLNGEAFYNDKMDEIVELLEEKHLLNE-------DKGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLSAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SYHFKQLKAVLKEMGFDWSD-DMHHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAIQS 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF+  +V     E    YVQ
Sbjct: 393 AKEQISEKNPDLENKDVVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  S+  +A           F  +     +  D    +++  + +YP  + +A   
Sbjct: 452 YTHARAVSLLEKAG----------FVPSETADYALNDDISWEVVKLVQKYPETVLSAGEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H +           + +    RL LV+AV  ++   L 
Sbjct: 502 YEPSVIAKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P++M
Sbjct: 554 LLGLHAPDKM 563


>gi|328957660|ref|YP_004375046.1| arginine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673984|gb|AEB30030.1| arginine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 564

 Score =  365 bits (938), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 132/611 (21%), Positives = 242/611 (39%), Gaps = 79/611 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   LKE        +KI+   ++E P+   HG ++   A  L++     P  IA
Sbjct: 2   DYKLGVAQALKEQIGDALPIEKIVS--LLENPKSAEHGDIAFP-AFALAKAFRKAPQQIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +   +   P V+ + + G  ++N +L+       +L  I+  G  YG   IG    V 
Sbjct: 59  TDLGETVN-SPIVEKIEVVGP-YLNFFLNKKEVSSAVLKEILEKGPHYGDAEIGGNRNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G++LA+++   G+   +  ++ D G Q   L +    W
Sbjct: 117 IDMSSPNIAKPISMGHLRSTVIGNSLANILTKVGFNPIKINHLGDWGTQFGKLIVGYKLW 176

Query: 184 RYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQA 240
             ++A+ N+   +L   Y           EL D+           +++   + K +  ++
Sbjct: 177 GSEEAVKNDPIVELLRLYVKFHEEAEEKPELDDEAREWFKKLEDGDQEAQRLWKWFREES 236

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +K      + L+I  D F  E  ++      +++++D L  +  +         +    
Sbjct: 237 -LKEFNHVYERLDITFDSFDGEAFYN----DKMQEVMDLLEEKNVL-------SVNDGAT 284

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++  L              + KSDG+  Y   DLA    +     F   +Y +G++
Sbjct: 285 IVDLEKYNL----------NPALIKKSDGATLYITRDLAAAIYRKRTYDFAMSLYAVGNE 334

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S + K+L+AV   +    A  ++       + + G   K+S R G  + L  V+D+   
Sbjct: 335 QSHHFKQLKAVLKEMGYDWAD-DMHHIPFGLITQGGK--KLSTRKGKIVLLEEVLDDAVA 391

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V F  L        DF   +V     E    YV
Sbjct: 392 SALEQIEEKNTDLPNKEIIADQVGIGAVVFHDLKNDRLNNFDFTIEEVVRFEGE-TGPYV 450

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR  SI R++     D   D             D    ++I  L  YP  ++ A  
Sbjct: 451 QYTRARAMSIIRKSGIAGIDTTADY---------PLDDAYSWEIIKLLESYPDDVQRAYE 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A +   LA  F+ ++++ +           +      RL LV +VA+I+   L
Sbjct: 502 KFEPSVIAKHAIHLAQAFNKYYANSKVL--------ADDAQKPARLALVQSVATILKEDL 553

Query: 575 NIIGVESPNEM 585
            ++GV++P++M
Sbjct: 554 RLLGVQAPDQM 564


>gi|238062127|ref|ZP_04606836.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883938|gb|EEP72766.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 572

 Score =  365 bits (938), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 133/622 (21%), Positives = 234/622 (37%), Gaps = 87/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L    + RL      +          +D +V    R   H    ++AA+ L+R LG  
Sbjct: 1   MNLEKLLADRLAQAFSAVA------GGPVDPVV----RRSQHADYQSDAALSLARRLGRP 50

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  I+ + ++     +V ++G GFINL ++   L  +LS + V     G  +    
Sbjct: 51  PRDIATEILGQAELADLCSAVEVSGPGFINLTVADPALGALLSPMAVD-ARLGVAVSAAP 109

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ + N    MHVGH R  V+GD    L+ + G+ V +  ++ D G     L   
Sbjct: 110 QTVVVDYSAPNVAKEMHVGHLRSTVIGDAAVRLLEWLGHRVIKANHLGDWGTPFGMLIEH 169

Query: 181 VF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDY 236
           +      +A +       + +Y    +K    +   + +      L   +E  L + +  
Sbjct: 170 LLDLGESEAAHELSVGDLDSFYKAARVKFDADDAFKERARRRVVALQGGDELTLRLWR-- 227

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293
               ++         +  Q  + ++E DF+ G+      +  + D L R G +       
Sbjct: 228 ---LLVAESEKYFLTVYDQLGVLLTEQDFY-GESYYNDMLAPVTDELDRLGLLR------ 277

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGF 349
                    D      +F     G D   +   + K DG Y Y A DLA  + +    G 
Sbjct: 278 ---------DSGDAACVFPEGFTGRDGQPLPIIVRKRDGGYGYGATDLAAIRHRTRNLGA 328

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRDGMPIKMS- 401
             ++YV+G     + + + AVA            +      +L    ++ R      +  
Sbjct: 329 TRLLYVVGLPQRQHFEMVYAVARQAGWLSPPAVAEHIGFGSILGSDGKMLRSRAGGSIKL 388

Query: 402 --------KRAGDFITLR----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                    RA +    +           V   VG  ++++  L     +   FD+ ++ 
Sbjct: 389 VGLLDEAVTRAAELARQKNPDLPEAAIADVARAVGIGAIKYADLSTDRIKDYVFDWQRML 448

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QYA+AR RSIFR+A             +      S    +E  L + L 
Sbjct: 449 SLD-GNTAPYLQYAHARIRSIFRRAG----------LGQITAASISIAHPAEHALALELV 497

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +  V+       E ++LA YL+ LA+ F G + H    P LR       ++   RL L 
Sbjct: 498 NFGTVVTGVEQTLEFHRLAGYLHTLAATFSGFYEHC---PVLR----AEGEVRASRLALC 550

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A I++ GL ++G+ +P  M
Sbjct: 551 DLTARILHRGLYLLGIATPERM 572


>gi|148544494|ref|YP_001271864.1| arginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153859|ref|YP_001842200.1| arginyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363078|ref|ZP_03847214.1| arginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682815|ref|ZP_08162331.1| arginine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166987304|sp|A5VL03|SYR_LACRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229470719|sp|B2G8D8|SYR_LACRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148531528|gb|ABQ83527.1| arginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225203|dbj|BAG25720.1| arginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071899|gb|EEI10186.1| arginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977165|gb|EGC14116.1| arginine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 562

 Score =  365 bits (938), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 134/584 (22%), Positives = 234/584 (40%), Gaps = 80/584 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IERP+D ++G  +      L++ L   P  IA  +V ++  +   + V +AG  +IN +L
Sbjct: 27  IERPKDSSNGDYAFPTFF-LAKTLHKAPQMIASELVEKVDQNG-FEKVVVAGP-YINFFL 83

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  KIL +I+     YG   +G  + V I++ S N   PM +GH R  ++G+ +A 
Sbjct: 84  DKAQVGAKILQTILADPEHYGEIDLGHQSNVTIDYSSPNIAKPMGMGHLRSTMIGEAVAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           ++    Y + R  Y+ D G Q   L  +   W  +  +  +  +    YY  +  +    
Sbjct: 144 ILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPINTLLKYYVRINNEADEH 203

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
               +        L   +E+   +   +   ++ +  R   K L++  D F  E      
Sbjct: 204 PEYTEAGRNWFAKLEHGDEEAWRLWHWFREVSLERFQRV-YKMLDVNFDSFNGEAF---- 258

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + I  L  +  +         S+  +  D+D   L              ++KS+
Sbjct: 259 SAQKMEEPIQLLRDKDLL-------KPSRGAEIVDLDEYNL----------PPLLIIKSN 301

Query: 329 GSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLC 386
           G+ TY   DLA     K   G    +YV+G++   Y K+L A    +      QI  +  
Sbjct: 302 GTTTYITRDLATALFRKRMYGHAKSLYVVGAEQETYFKQLRAALKEMGFNWWDQIEHISF 361

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGSDS 421
            L+ L       KMS R G+ ++L  V++                         EVG  +
Sbjct: 362 GLMNL----NGKKMSTRKGNVVSLEDVLNDSIDLARKQIAEKNPDLENADEVAKEVGVGA 417

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V F  L       ++F    V +   E    YVQYA AR  SI R+        D DL  
Sbjct: 418 VIFHDLKNYRRNAVNFKLEDVVKFEGE-TGPYVQYARARAESILRKGGIRDFS-DVDLTK 475

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                          +LI  L +Y   I+ A +  +P  +A Y  +LA  F+ +++H R 
Sbjct: 476 AGA---------EAWELISFLGQYSEAIKRAALNYDPSVIAKYALELAKKFNQYYAHTRI 526

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +    RL L  AV+ ++ S L+++ +++P+EM
Sbjct: 527 L--------DKDEAQPARLALTQAVSDVLKSALDLLDIKAPDEM 562


>gi|196006025|ref|XP_002112879.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens]
 gi|190584920|gb|EDV24989.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens]
          Length = 668

 Score =  365 bits (938), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 120/623 (19%), Positives = 245/623 (39%), Gaps = 81/623 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD----- 60
           +    ++   ++   K       +  IV    ++   G    N AMILS+ L  +     
Sbjct: 84  NIQKVVQGIFEQAIVK-AFPDVSISAIVHSSTQER-FGDYQCNNAMILSKVLKENGKSLS 141

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P ++AE I+  +  +  ++   IAG GFIN+ +   ++  +LS I++ G+      + + 
Sbjct: 142 PRSVAEQIIQHLPANDVLEKTEIAGPGFINITIKKHFILSLLSDIIMYGVRPPV--MNRK 199

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V ++F S N    MHVGH R  ++GD+++ L+ F G++V R  ++ D G Q   L   
Sbjct: 200 MRVLVDFSSPNVAKEMHVGHLRSTIIGDSISRLLEFVGHDVVRISHLGDWGTQFGMLIAH 259

Query: 181 VFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +   + + L      +DL   Y               +    ++     +        + 
Sbjct: 260 LRDTFPKYLNQSPPIADLQAFYKAAKVRFDEDAVFKKRAYEAVVKLQARESDYF---KAW 316

Query: 239 QAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           + +  + +++ + +  +  + +    E  +       + D++ +L  +G +         
Sbjct: 317 EMICDVSKNEFEKIYQRLGVKVVNRGESFYQ----DMMIDVVKDLDTRGLL--------- 363

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                  ++D  + + +  +    V   ++KSDG +TY  +D+A  + +  +   D +IY
Sbjct: 364 -------ELDEGRKILK--VPNIKVPLTIVKSDGGFTYDTSDMAAMRQRVMDEKADWLIY 414

Query: 355 VMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +       + + + + + AV    +K    V +   V L  D    K   R+ D + L  
Sbjct: 415 ITDGGQGLHFEIIFSASEAVGYVNRKHVRVVHVPFGVVLGEDKK--KFKTRSTDTVRLVD 472

Query: 413 VVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
           ++DE                             V    +++  L R  +    F F K+ 
Sbjct: 473 LLDEGIRRAKAKLIDKGRDKVLSKEELEVAAKAVAYGCIKYADLSRNRTGDYIFSFDKML 532

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502
           +  K N   Y+ YA  R RSI R A     ++      +       EFD   E +L   +
Sbjct: 533 D-DKGNTAVYLLYALTRIRSIARLA-----NVSSSELTKVAESASIEFDHPKEWKLAKLI 586

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +P ++E        + L  ++Y+L+  F   +       + R       K+ M RL L
Sbjct: 587 LRFPEILEKILDDLLLHPLCDFMYELSCTFTEFYDTCYCIEKDR-KTGEILKINMNRLIL 645

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A A I+    +++G++  ++M
Sbjct: 646 CEATAMIMEKSFHLLGIDGVDKM 668


>gi|326692775|ref|ZP_08229780.1| arginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 563

 Score =  365 bits (938), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 129/612 (21%), Positives = 242/612 (39%), Gaps = 84/612 (13%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
               S L   L ++      EK       +E P+    G ++      L++ L   P  I
Sbjct: 5   TQVVSALAAVLTDLTASEIAEK-------LEAPKSSELGDVAFP-TFTLAKVLRQAPQQI 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           A  IVA I      + V   G  ++N +L   +  R+ L +I+    +YG N  G+G  V
Sbjct: 57  AANIVAEIDQTG-FEKVVATGP-YVNFFLDKVATSRETLQTILTLKADYGNNTDGQGENV 114

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF- 182
            I+  S N   PM +GH R  V+G+ LA++ A +GY+  +  ++ D G Q   L  +   
Sbjct: 115 TIDMSSPNIAKPMSMGHLRSTVIGNALANITAKNGYQPIKINHLGDWGTQFGKLIYAYKT 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQ 239
           W  +  +  +       YY   + K    +  +         L   +E+ L +   +  +
Sbjct: 175 WGSEDEVKADPIATLLRYYVEFHDKAKEDDSLNDAGRAWFKKLEDGDEEALALWAWFREE 234

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           + +K   +    L+I  D F  E  ++      +  ++D L  +  +             
Sbjct: 235 S-LKEFTEIYDRLDIGFDSFNGEAFYN----DKMDTVVDQLTAKDLL------------- 276

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
                   Q++  S +  +     + ++DG+  Y   DLA    + +   F   +YV+G 
Sbjct: 277 --VTSQGAQIVDLSDINPNLTPAMIKRTDGATLYMTRDLAAAVYRKDTYDFAKSLYVVGG 334

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI---------- 408
           +   +  +++AV + +  + A  +V       +  +G   KMS R GD +          
Sbjct: 335 EQREHFVQMKAVLSLMGFEWAD-DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLNDAH 391

Query: 409 ---------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                              V ++VG+ +V F  L    +   DF+  +V  + + +   Y
Sbjct: 392 DLALKQIQEKNPTLENKEEVAEQVGAGAVVFHDLMNDRTNNFDFNLEEVV-RFEGDTGPY 450

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY  AR +SI R+A                +   +  D     +I  L  +P  ++ A 
Sbjct: 451 VQYTNARAKSILRKAPVSVS-----------LDAVTLDDPMTWDIITTLNSFPATVQRAW 499

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             +E   +A Y   L+  F+ ++++ +       +  ++ +L   RL LV AV  ++   
Sbjct: 500 QQREASIIAKYALTLSRAFNKYYANSK-------ILTDDDQL-QARLALVEAVTIVLTES 551

Query: 574 LNIIGVESPNEM 585
           L ++GV++P EM
Sbjct: 552 LRLLGVKAPEEM 563


>gi|315641208|ref|ZP_07896285.1| arginine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482975|gb|EFU73494.1| arginine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 563

 Score =  365 bits (938), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 131/610 (21%), Positives = 246/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + E+  +    +   D+I+  +E P+   HG ++     +L++     P  IA  + 
Sbjct: 4   KVIVAEVLHEQLKNELSYDQILALLENPKSVDHGDVAF-PTFLLAKAFRKAPQAIAGELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            ++     V+ V   G  +IN ++S   + + IL   +V+   YG + IG    V I+  
Sbjct: 63  EQL-TSEYVEKVEAVGP-YINFFMSKKTISQAILHEALVADSHYGDSSIGNHESVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G++L  ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSLGFILEKVGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+       P      +Y++   +   DK     L      W   ++  D     + K  
Sbjct: 181 AVKAQ----PINELLRLYVEFHERAEEDKA----LEDEARAWFKKLEESDEEAVHLWKWF 232

Query: 246 RDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R++ LK  N  + +     D + G+      + +I+  L  +  + E        +    
Sbjct: 233 REESLKEFNKIYTMLEVSFDSYNGEAFYNDKMDEIVTLLEEKHLLQE-------DQGADI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+ +  L              + KSDG+  Y   D+A    +     F   +YV+G++ 
Sbjct: 286 VDLSQYDL----------NPALIRKSDGATLYITRDMAAALYRKRTYQFAKSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + K+L+AV   +  + +  ++       + +DG   K+S R G  + L  V++E    
Sbjct: 336 TYHFKQLKAVLKEMGFEWSD-DMYHVPFGLITKDGK--KLSTRKGKIVLLEEVLNEAVAS 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 AQQQIAEKNPSLANKEEVAKQVGIGAVVFHDLKNDRLNNFDFTLEEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI  +A           F  N     +  D +  +++  +  YP V++ A   
Sbjct: 452 YTHARAMSILTKAA----------FTFNPDATYALADDASWEVVKLIQAYPDVVQAAADK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   L+  F+ ++++ +       V A + +    RL LV AVA ++   L 
Sbjct: 502 YEPSVIAKHAIKLSQAFNKYYANTK-------VLAEDGE-KDSRLALVKAVAILLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P +M
Sbjct: 554 LLGLHAPEKM 563


>gi|332637432|ref|ZP_08416295.1| arginyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 561

 Score =  365 bits (938), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 138/591 (23%), Positives = 251/591 (42%), Gaps = 79/591 (13%)

Query: 25  EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84
           E  IL +  IE P+D   G  +     +L++   + P  IA  +   I    D  +V  A
Sbjct: 20  EATILSK--IEVPKDSTMGDFAF-PTFLLAKERHMAPNQIAATVAEAIDA-TDFKAVQAA 75

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G  ++N +L+       +   V+   ++G N  G+   V I+  S N   PM +GH R  
Sbjct: 76  GP-YVNFFLNQLTFGTDVLQTVLMNQDFGHNTDGEAGHVTIDMSSPNIAKPMSMGHLRST 134

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPG 203
           V+G++LA +   +GY+  +  ++ D G Q   L  +   W  +  +  +  +    YY  
Sbjct: 135 VIGNSLAEISKANGYQPIKINHLGDWGTQFGKLISAYKRWGSEDEVKADPINTLVKYYVR 194

Query: 204 VYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            + +       D         L   +E+   +   +  ++ +K   +  + L+I+ D F 
Sbjct: 195 FHEEAKENPALDDEGRAWFKKLEDGDEEARQLWSWFREES-LKEFMELYETLDIEFDSFN 253

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      +  +ID L  +G + E       S+  Q  D+++  L           
Sbjct: 254 GEAFYN----DKMDGVIDTLKEKGLLIE-------SQGAQVVDLEKYNLNVA-------- 294

Query: 321 DRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              + ++DG+  Y   DLA     K    F   +YV+G +   +  +L+AV   +  + +
Sbjct: 295 --MIQRTDGATLYMTRDLAAAIFRKKNYNFVKSLYVVGGEQREHFMQLKAVLKEMGYEWS 352

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------------------------- 414
             +V       +  DG   K+S R+G  I L+ V+                         
Sbjct: 353 D-DVEHIPFGLITVDGK--KLSTRSGRIILLKDVLKDSVDLALQQINEKNPTLGNKELVA 409

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EVG+ +V F  L  +     DF   +V  + + +   YVQYA AR +SI R+A +  P+
Sbjct: 410 HEVGTGAVVFHDLMNERIGNFDFKLEEVV-RFEGDTGPYVQYANARAQSILRKAGN--PE 466

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           LD       VI  E+ ++T        LA++  V+  A   +EP  +A Y  +L+  F+ 
Sbjct: 467 LDMSNL---VIDDENVWETE-----KLLADFGDVVRRAWRDREPSVIAKYALNLSRTFNK 518

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++++ +       + A + +L   RL LV AV+ ++   L ++GV++P EM
Sbjct: 519 YYANSK-------ILAEDEQL-NARLALVTAVSQVLTESLRLLGVKAPKEM 561


>gi|293553971|ref|ZP_06674575.1| arginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601897|gb|EFF32145.1| arginyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 563

 Score =  365 bits (938), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 119/604 (19%), Positives = 242/604 (40%), Gaps = 74/604 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +    +  +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDVVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEE 180

Query: 188 ALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKI 244
           A+     ++L   Y     +     EL ++  +      E  E+ + + + +  ++M K 
Sbjct: 181 AVKAEPINELLRLYVQFHEVAETEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESM-KE 239

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L ++ D    E  ++      + +I+  L  +  + E        K  +  D+
Sbjct: 240 FNKIYDLLEVRFDSLNGEAFYN----DKMDEIVKLLEEKHLLNE-------DKGAEIVDL 288

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
               L              + KSDG+  Y   DLA    +     F   +YV+G++ S +
Sbjct: 289 SAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQSYH 338

Query: 364 VKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIKMS 401
            K+L+AV   +    +                           L E++         ++S
Sbjct: 339 FKQLKAVLKEMGFDWSDDMHHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKEQIS 398

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +AR 
Sbjct: 399 EKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTHARA 457

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+  +A           F  +     +  D +  +++  + +YP  + +A    EP  +
Sbjct: 458 VSLLEKAG----------FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVI 507

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A +   LA  F+ +++H +           + +    RL LV+AV  ++   L ++G+ +
Sbjct: 508 AKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLRLLGLHA 559

Query: 582 PNEM 585
           P++M
Sbjct: 560 PDKM 563


>gi|260585076|ref|ZP_05852818.1| arginine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157272|gb|EEW92346.1| arginine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 563

 Score =  365 bits (938), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 140/615 (22%), Positives = 245/615 (39%), Gaps = 88/615 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+   +   + +   +    ++I    +IE P+    G L+   A  L++ L   P  IA
Sbjct: 2   DYKKIVAEQIHKTISEHLSFEEIYK--MIEVPKYAEQGDLAFP-AFSLAKVLRKAPQAIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + IV  +    +  S  +A   + N +LS   +  + L +++     YG    G+G    
Sbjct: 59  QEIVEAV--SDEHISQAVAMGPYANFFLSKGKFADETLHTVLEQRENYGNFDFGQGRNAI 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           ++  S N   PM +GH R  V+G+ +A+L    GY   +  ++ D G Q   L ++   W
Sbjct: 117 VDMSSPNIAKPMSMGHLRSTVIGNAIANLEKKVGYNPIKINHLGDWGTQFGKLIVAYKKW 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--M 241
             ++A+  +    P      +Y+K       +      L      W   ++D   +A  +
Sbjct: 177 GTKEAVEQD----PIAELLRLYVKFHD----EAERDSSLEDEGRAWFKKLEDGDAEAEEL 228

Query: 242 MKIIR-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
               + + LK  N  +D+     D + G+      +  I++ L   G             
Sbjct: 229 WNWFKSESLKEFNRIYDVLGITFDSYNGEAFYNDKMDPIVEYLESNGIT----------- 277

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                 +DR   +        D+   L+ KSDG+  Y   DLA    + E   F   IYV
Sbjct: 278 -----TIDRGATVVHLDKY--DLPPALIKKSDGATLYITRDLAAAHYRKETYDFAKNIYV 330

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G++ + + ++L+AV   +     Q N++      +   G   K+S R G  + L  V+ 
Sbjct: 331 VGNEQANHFRQLKAVLNEMGRDW-QENMIHVGFGLITLGGK--KLSTRKGKIVLLEEVLR 387

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                         VG  +V F  L    +   DF+  +V  Q +   
Sbjct: 388 EAEELALKQIEAKNPNLPNKEQVAKQVGVGAVIFHDLKNDRTNNFDFNLEEVV-QFEGET 446

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQY  AR  SI R+A              ++    S  D    +++  +  YP +++
Sbjct: 447 GPYVQYTRARAMSILRKAG----------VSVDLSQPLSLEDDYAWEVLKQIENYPNIVK 496

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP  ++ Y+  LA  F+ ++++ R       +   +  L   RL LV A A I+
Sbjct: 497 YAESKFEPSVISKYVISLAQAFNKYYANSR-------ILQEDEGL-NARLALVEATAVIL 548

Query: 571 NSGLNIIGVESPNEM 585
             GL I+GVESP+EM
Sbjct: 549 KQGLAILGVESPDEM 563


>gi|325662130|ref|ZP_08150748.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085927|ref|ZP_08335010.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325471579|gb|EGC74799.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330406850|gb|EGG86355.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 588

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 125/630 (19%), Positives = 239/630 (37%), Gaps = 92/630 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F      L+N  +       + K  L      RP  C       N AM  ++     P+
Sbjct: 4   IFEFIQEELENAFEAAGYDRGLGKVTLSN----RPDLCE---YQCNGAMAGAKTYRKAPI 56

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V +++    +        GFINL L   +L   L+ +       G     +   
Sbjct: 57  MIANDVVEKLQESTCIQEAEAVAPGFINLKLDREFLAGYLNQMSED-AHLGFETAKEPKT 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +++  AN   P+HVGH R A++G+++  +  F+G+ V  + ++ D G Q+  +   + 
Sbjct: 116 IIVDYGGANVAKPLHVGHLRSAIIGESIKRIGKFAGHHVIGDVHLGDWGYQMGLVITELK 175

Query: 183 WRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV----KD 235
            R  +  Y ++    + PE     +         A  Y+ E  ++ EE            
Sbjct: 176 KRKPELPYFDENFAGEYPEEAPFTIGELEEIYPTASAYAKEHEDYKEEALQATFLLQNGH 235

Query: 236 YSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              +A+ K I        + +   LN+  D++  E D        I D+++ + ++GY +
Sbjct: 236 RGYRAVWKHIMNVSVADLKKNYGNLNVDFDLWKGEADAQEY----IPDMVEYMKKEGYAH 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
                           +D   L+       D  + P   +LKSDG+  Y   DLA    +
Sbjct: 292 ----------------IDNGALVVDVKEETDTKEIPPCMILKSDGAALYDTTDLATLIER 335

Query: 345 YE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSK 402
            +    D +IYV+      +  ++   A        + ++       +  +DG P K   
Sbjct: 336 EKLYQPDEVIYVVDKRQELHFVQVFRCARKTKIVNEKTDLQFVGFGTMNGKDGKPFK--T 393

Query: 403 RAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLD 436
           R G  + L +++ E                          VG  ++++  L  + S+   
Sbjct: 394 RDGGVMRLENLIREINEEMYKKITDNRTVSEEEARKTAQIVGLSAIKYGDLSNQASKDYV 453

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           FD  +     + N   Y+ Y   R +SI  R A+      D  L         S    SE
Sbjct: 454 FDVDRFTSF-EGNTGPYILYTIVRIKSILARYAEMEGSKTDVKLL--------SACSDSE 504

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L++  A++  VIEN      P+K+  Y+YDLA+ F+  +         + +   +++ 
Sbjct: 505 KALMLEAAKFNSVIENTLEELAPHKICAYIYDLANTFNRFYH------ETKILAEEDKER 558

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + L+     ++ + ++++G E+P  M
Sbjct: 559 QASFIALLTVTKKVLETCIDLLGFEAPERM 588


>gi|227510555|ref|ZP_03940604.1| arginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190207|gb|EEI70274.1| arginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 568

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 135/608 (22%), Positives = 260/608 (42%), Gaps = 74/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++ N +  +        ++ ++  +E+P+  + G L+   A  L++     P  IA
Sbjct: 7   DYKAQVTNSILSVLNDELSSAEVYEK--LEQPKSLSMGDLAF-PAFSLAKVFHKAPNQIA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V++I      + V   G  +IN +L    +  ++L++I+  G  YG+N  GKG  V 
Sbjct: 64  ADLVSKIDQ-TSYEKVEAKGA-YINFFLDKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVP 121

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G+++A L+  +GY   ++ ++ D G Q   L ++   W
Sbjct: 122 IDMSSPNIAKPISMGHLRSTVIGNSIAKLLVKNGYHPIKDNHLGDWGTQFGKLIVAYKKW 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPE--EKWLPIVKDYSVQA 240
             +  +  +  +    YY   + +     EL D+         +  E+   + K +   +
Sbjct: 182 GNEDDVKKDPINNLVKYYVKFHKEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVS 241

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++        L +  D F  E  ++      + + I  L  +G + E       S+  Q
Sbjct: 242 -LESFNKIYDKLGVTFDTFNGEAFYN----DKMDEGIQILKDKGLLVE-------SQGAQ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
              +D+ +L              +LKSDG+  Y   D+A    +         +YV+GS+
Sbjct: 290 VVKLDKYKL----------NPALILKSDGATLYITRDIATAIYRDRTYKPAMNLYVVGSE 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + Y K+L+AV   +  + A+                          L E++    +   
Sbjct: 340 QTYYFKQLKAVLLEMGLQSAENLHHIPFGLITVNGKKLSTRSGRIILLDEVLDDAINLAK 399

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++  +  D      V  EVG  ++ F  L  + +  +DF      +   E    YVQY+
Sbjct: 400 KQIEAKNPDLEDKDEVAKEVGVGAIIFGDLKNERTNNIDFVLEDQLKFEGE-TGPYVQYS 458

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI ++A      +DF    + +       D +  + +  L E+P V+E+A    E
Sbjct: 459 HARAESILKKA----SSIDFHTTDKEL------DDPAAWETVTALNEFPHVVESACKDFE 508

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P ++A Y   LA  F+ +++H +       V   + KL   RL LV +V+ ++   LN++
Sbjct: 509 PSEVAKYSLKLAKAFNKYYAHSK-------VLVEDDKL-GARLALVKSVSIVLKESLNLL 560

Query: 578 GVESPNEM 585
           GV++P+ M
Sbjct: 561 GVKAPDAM 568


>gi|218752998|ref|ZP_03531794.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 352

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 187/381 (49%), Gaps = 29/381 (7%)

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           Y+ ++ +++  K     L+ P+ +     +   V  M   I+  L       D++  ED 
Sbjct: 1   YITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDS 59

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            H G    + + I  L   G +YE                       R++  GDD DR +
Sbjct: 60  MHTG--GRVENAIARLRETGNIYE----------------KDGATWLRTSAFGDDKDRVV 101

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           +KSDG   Y A DLAY+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL
Sbjct: 102 IKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVL 161

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           + ++V L RDG P++MSKRAG  +TL  +V+ +G D+ R+ ++       +D D      
Sbjct: 162 IGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSS 221

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            S ENPV+YVQYA+AR  ++ R A ++    D +         E      E  L+  L E
Sbjct: 222 ASNENPVYYVQYAHARLSALARNAAELALIPDTNHL-------ELLNHDKEGTLLRTLGE 274

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +PRV+E A   +EP+++  YL DLA  +H  +   R  P+          L   RL L  
Sbjct: 275 FPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQG---DEQPTDLHTARLALCQ 331

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A   +I +GL IIGV +P  M
Sbjct: 332 ATRQVIANGLAIIGVTAPERM 352


>gi|163791004|ref|ZP_02185426.1| arginyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873743|gb|EDP67825.1| arginyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 564

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/610 (21%), Positives = 244/610 (40%), Gaps = 85/610 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +   +   +   +D+IV  +E+P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KLTVAQALNEQIGDALSIDQIVNLLEKPKSVEHGDIAFP-AFALAKTYRKAPQQIAIELG 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             +   P V+ + + G  ++N +L+       +L  ++  G  YG + IGK   V I+  
Sbjct: 63  ETVN-SPIVEKIEVVGP-YLNFFLNKQEVSAAVLKEVLEQGAHYGDSKIGKNRNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+ LA+++   G+   +  ++ D G Q   L +    W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNALANILTKVGFNPIKINHLGDWGTQFGKLIVGYKLWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKII 245
           A+  N    P G    +Y+K       +      L+    +W   ++  D   Q + K  
Sbjct: 181 AVKEN----PIGELLRLYVKFH----EEAEEKPELDDNAREWFKKLEDGDEEAQNLWKWF 232

Query: 246 RDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R++ LK  N  +D      D   G+      +++++D L  +  +         +     
Sbjct: 233 REESLKEFNHVYDRLNITFDSFNGEAFYNDKMQEVVDLLEEKNVL-------TVNDGATL 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+++  L              + K+DG+  Y   DLA    +     F   +Y +G++ 
Sbjct: 286 VDLEKYNL----------NPALIKKTDGATLYITRDLAAAIYRKRTYDFALSLYAVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    A  ++       + + G   K+S R G  + L  V+D+    
Sbjct: 336 SNHFKQLKAVLKEMGFDWAD-DMYHVPFGLITQGGK--KLSTRKGKIVLLEEVLDDAVAS 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF   +V     E    YVQ
Sbjct: 393 ALEQIEEKNSELPNKEIIADQVGIGAVIFHDLKNDRLNNFDFTIEEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR  SI R++     D   +             D    ++I  L  YP  ++ A   
Sbjct: 452 YTRARAMSIIRKSGLAGIDTTVNY---------PLDDAYSWEIIKLLQNYPADVQRAYEK 502

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ ++++ +           +      RL LV +VA+I+   L 
Sbjct: 503 FEPSVIAKHAIHLAQAFNKYYANSKVL--------ADDAQRPARLALVQSVATILKEDLR 554

Query: 576 IIGVESPNEM 585
           ++GV++P++M
Sbjct: 555 LLGVQAPDQM 564


>gi|299537113|ref|ZP_07050416.1| arginyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
 gi|298727354|gb|EFI67926.1| arginyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
          Length = 557

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 128/617 (20%), Positives = 244/617 (39%), Gaps = 98/617 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  + + + +   +  + ++I+   ++E+P+    G ++      L++     P  IA 
Sbjct: 1   MNQLIADSIADALKQQIIGEEIVS--LLEKPKSLELGDVAF-PCFTLAKVWKKSPQNIAA 57

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I ++I  D  ++ V   G G++N++L    + + +   ++   +       K   V ++
Sbjct: 58  HIASQINHD-SIERVQAVG-GYVNIFLDQQKVTQQVLRKILRDKQQYGTTPTKMGTVVLD 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           F S N   P  +GH R  V+G+ LA++   +GY+  R  ++ D G Q   L ++   W  
Sbjct: 116 FSSPNIAKPFSMGHLRSTVIGNALANIAEKNGYQAIRINHLGDWGTQFGKLIVAYQLWGD 175

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMK 243
           +QA+  +    P      +Y+K       +      LN         ++D     QA+ +
Sbjct: 176 KQAISAS----PIEELLKIYVKFH----EEAEQDPTLNEQARAAFKALEDGNEEAQALWQ 227

Query: 244 IIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             RD          + L I  D F  E  ++      +  ++  L  +G +         
Sbjct: 228 WFRDVSFVEFQTIYELLGIHFDAFTGEAFYN----DKMPSVVTELKEKGLL-------VA 276

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYE-RGFDNMI 353
           S+     +M+             ++   L+K  DG+  Y   DLA    + +      M 
Sbjct: 277 SEGAYVVEME-------------EMPPCLIKKTDGATLYATRDLAAALYRQQHYQPQKMF 323

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+G++ S + K+L  V   +    A+ N+       + +DG   KMS R G  + L  V
Sbjct: 324 YVVGNEQSLHFKQLFQVIEKMGYPWAK-NLQHVSFGMMLKDGK--KMSTRKGKVVLLADV 380

Query: 414 VDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           + E                         VG  +V F  +       ++F   ++     E
Sbjct: 381 LAEAITTAQRNMGQKNPSLPNKEQVAKQVGVGAVIFNDVKSYRLNDIEFSIEQMMNFEGE 440

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               YVQY YAR  SI  +AK    D+ F        P            I+ L ++P+ 
Sbjct: 441 -TGPYVQYTYARICSILDKAKAPTQDILFKSLGEQAWPM-----------ILLLEQFPKT 488

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  A    +P ++A Y   LA +F+ +++  +       + A++ +    RL L  +VA 
Sbjct: 489 VAMAFEQADPSQIAKYALQLARLFNKYYAQYK-------ILADDEQ-QASRLALCQSVAI 540

Query: 569 IINSGLNIIGVESPNEM 585
           ++   L ++G+ESP  M
Sbjct: 541 VLKESLALLGIESPENM 557


>gi|227551770|ref|ZP_03981819.1| arginine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257887069|ref|ZP_05666722.1| arginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895634|ref|ZP_05675287.1| arginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898223|ref|ZP_05677876.1| arginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293377755|ref|ZP_06623944.1| arginine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227179075|gb|EEI60047.1| arginine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257823123|gb|EEV50055.1| arginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832199|gb|EEV58620.1| arginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836135|gb|EEV61209.1| arginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|292643755|gb|EFF61876.1| arginine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 563

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 124/610 (20%), Positives = 247/610 (40%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +    +  +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDVVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKI 244
           A+       P      +Y++    E+A+      LN     W   ++   + ++Q     
Sbjct: 181 AVKAE----PINELLRLYVQF--HEVAETEPE--LNEEARAWFKRLEEGDEEAIQLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + +K  N  +D+   + D   G+      + +I++ L  +  + E        K  + 
Sbjct: 233 RDESMKEFNKIYDLLEVQFDSLNGEAFYNDKMDEIVELLEEKHLLNE-------DKGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLSAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   +    +  ++       + + G   K+S R G  + L  V++E    
Sbjct: 336 SYHFKQLKAVLKEMGFDWSD-DMHHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAIQS 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L        DF+  +V     E    YVQ
Sbjct: 393 AKEQISEKNPDLENKDVVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  S+  +A           F  +     +  D    +++  + +YP  + +A   
Sbjct: 452 YTHARAVSLLEKAG----------FVPSETADYALNDDISWEVVKLVQKYPETVLSAGEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A +   LA  F+ +++H +           + +    RL LV+AV  ++   L 
Sbjct: 502 YEPSVIAKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLR 553

Query: 576 IIGVESPNEM 585
           ++G+ +P++M
Sbjct: 554 LLGLHAPDKM 563


>gi|328675681|gb|AEB28356.1| Arginyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 581

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 130/621 (20%), Positives = 247/621 (39%), Gaps = 88/621 (14%)

Query: 11  LKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           ++N+L EI  K+  +   ++    V+   R+   GH   NAAM L++     P  IAE I
Sbjct: 3   IENHLSEIFAKVFKKLGYVESFAKVVTSTREDV-GHFQCNAAMPLAKFAKKPPFVIAEEI 61

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           +  I  +     + +A  GFIN+ L+P +L   +++  ++  ++G     +  KV ++F 
Sbjct: 62  IEHIDAEDIFAKLEVAKPGFINITLAPKFLA-TITNKFLNSTKFGAQNNSQSRKVVLDFG 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
             N   PMHVGH R A++GD L  +  F       + ++ D G Q+  L   +     + 
Sbjct: 121 GPNVAKPMHVGHIRSALLGDALQRIHRFYNDTAVSDVHLGDWGTQMGMLIEEIKLESPEL 180

Query: 189 LYNNDSDLPEGYYPGVYLKHV---GKELAD------KYSSELLNFPEEKWLPIVK----- 234
           +Y +++      Y G Y        +ELA+      K     ++  E+  L   +     
Sbjct: 181 VYFDEN------YTGEYPAESPVTVQELAEIYPRASKRCKSDIDEMEKARLATFELQQGR 234

Query: 235 -------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                   + V+  +  ++ D   L++  D+++ E D ++     + ++I       ++Y
Sbjct: 235 RGYVALWQHFVKISIDAVKKDFDNLDVHFDLWLGESDANK----FVDEMISYFKANNFIY 290

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YE 346
           E                D+   +  +   G      ++K DG   Y   DLA    +  +
Sbjct: 291 E----------------DQGAWVIDTNKDGIP-PLIVIKKDGGIMYGTTDLATLWQRSKD 333

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              D +IYV+    S + K++ +VA    +  +K ++  +    V   +DG P K   R 
Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKIVSEKCKLKHVAFGTVN-GKDGRPFK--TRE 390

Query: 405 GDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           G  + L  +                    ++++   +++F  L    +    FD  K   
Sbjct: 391 GGVMHLADLISQAKEYAKKRMPDENDDNIINQIAMATIKFGDLVNNYANDYIFDLEKFA- 449

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           Q +     Y+ Y   R +SI R+      D+        VI      +  E +L + L +
Sbjct: 450 QHEGKTGPYLLYTAVRAKSILRKIFGENYDIGSLTKDYKVINA---HNEHEEKLQLQLIQ 506

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P  I+ A    +P+ +  Y Y LA+ F+  + +            N+  L   R+ L  
Sbjct: 507 FPIAIQRAYENSQPHHICEYAYSLANNFNKFYVNC------PITNLNDESLRKARIALCM 560

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A    +    N++G+  P  M
Sbjct: 561 ATVKAMTIATNLLGISIPERM 581


>gi|194466680|ref|ZP_03072667.1| arginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453716|gb|EDX42613.1| arginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 562

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 135/584 (23%), Positives = 233/584 (39%), Gaps = 80/584 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IERP+D ++G  +      L++ L   P  IA  +V ++  D   + V +AG  +IN +L
Sbjct: 27  IERPKDPSNGDYAFPTFF-LAKTLHKAPQMIASELVEKVDQDG-FEKVVVAGP-YINFFL 83

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             + +  KIL +I+     YG   +G    V I++ S N   PM +GH R  ++G+ +A 
Sbjct: 84  DKAQVGAKILQTILADPEHYGEIDLGHEANVTIDYSSPNIAKPMGMGHLRSTMIGEAVAR 143

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           ++    Y + R  Y+ D G Q   L  +   W  +  +  +  +    YY  +  +    
Sbjct: 144 ILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPINTLLKYYVRINNEADEH 203

Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
               +        L   +E+   +   +   ++ +  R   K L++  D F  E      
Sbjct: 204 PEYTEAGRNWFAKLEHGDEEAWRLWHWFREVSLERFQRV-YKMLDVNFDSFNGEAF---- 258

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + I  L  +  +         S+  +  D+D   L              ++KS+
Sbjct: 259 SAQKMEEPIQLLRDKDLL-------KPSRGAEIVDLDEYNL----------PPLLIIKSN 301

Query: 329 GSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLC 386
           G+ TY   DLA     K   G    +YV+G++   Y K+L A    +      QI  +  
Sbjct: 302 GTTTYITRDLATALFRKRMYGHAKSLYVVGAEQETYFKQLRAALKEMGFNWWDQIEHISF 361

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGSDS 421
            L+ L       KMS R G+ ++L  V++                         EVG  +
Sbjct: 362 GLMNL----NGKKMSTRKGNVVSLEDVLNDSIDLARKQIAEKNPDLENADEVAKEVGVGA 417

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V F  L       ++F    V +   E    YVQYA AR  SI R+        D DL  
Sbjct: 418 VIFHDLKNYRRNAVNFKLEDVVKFEGE-TGPYVQYARARAESILRKGGIRDFS-DVDLTK 475

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                          +LI  L +Y   I+ A +  +P  +A Y  +LA  F+ +++H R 
Sbjct: 476 AGA---------EAWELISFLGQYSEAIKRAALNYDPSVIAKYALELAKKFNQYYAHTRI 526

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    +  +    RL L  AV+ ++ S L+++ +++P+EM
Sbjct: 527 L--------DKDEAQPARLALTQAVSDVLKSALDLLDIKAPDEM 562


>gi|167626497|ref|YP_001676997.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596498|gb|ABZ86496.1| Arginine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 642

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 123/629 (19%), Positives = 242/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L +   +   K+   +     +   R      GH   N AM L++     
Sbjct: 62  MNI----ENHLSDIFAQAFEKLGYSQSFAKVVTSTR---EGVGHFQCNGAMPLAKFAKKA 114

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IA+ I+ +I  +     + +A  GFIN+ LS  +L       + S  ++G     K 
Sbjct: 115 PLMIAQEIIEQIDDEDIFSKLEVAKPGFINISLSNKFLAATTDKFLNS-SKFGVQGNTKP 173

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  L  F    V  + ++ D G Q+  L   
Sbjct: 174 KKVVLDFGGPNVAKPMHVGHIRSALLGDALQRLHRFYNDNVISDVHLGDWGTQMGMLIEE 233

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLN------FPEEKWLP 231
           +       +Y +++      Y G Y K      +ELA+ Y              ++    
Sbjct: 234 IKLESPDLVYFDEN------YNGEYPKESPVTVQELAEIYPRASKRCKSDIIEMDKARQA 287

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  ++ I+ D  +L++  D+++ E D ++     + ++I  
Sbjct: 288 TFELQQGRKGYVALWQHFVRISIEAIKKDFDSLDVHFDLWLGESDANK----FVDEMIAY 343

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 344 FKTNNFIYE----------------DEGAWVIDTNKEGIP-PLIVIKKDGGVMYGTTDLA 386

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  ++ ++  +    V   +DG 
Sbjct: 387 TLWQRAKDLNPDEIIYVVDKRQSLHFKQVFSVAKRTKVVSEECKLKHVAFGTVN-GKDGR 445

Query: 397 PIKMSKRAGDFI--------------------TLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  +                       ++++++   +++F  L    +    
Sbjct: 446 PFK--TREGGVMHLSDLISQAKNYAHKRMPDENDENIINQIAMATIKFGDLVNNYANDYI 503

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R ++I R+      + D +   +     +++ +  E 
Sbjct: 504 FDLEKFA-QYEGKTGPYLLYTTVRAKAILRK--VFGDNYDINSLAKEYRITKAD-NEHEE 559

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L + L ++P  +  A    +P+ +  Y Y LA+ F+  + +         +  ++ +L 
Sbjct: 560 KLQLQLIQFPIAVSRAYENSQPHHICEYAYSLANSFNRFYVNC------PIMNLDDEQLK 613

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    +++G+  P  M
Sbjct: 614 KSRIALCMATVKAMTIATDLLGISIPERM 642


>gi|309806624|ref|ZP_07700620.1| arginine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166929|gb|EFO69112.1| arginine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 553

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 126/604 (20%), Positives = 248/604 (41%), Gaps = 82/604 (13%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
             ++ I   + + K+ ++  +IERP++   G  +      L++    +P  IA  + A++
Sbjct: 1   EVVETIAKVVSLPKEKIEA-LIERPKNVKLGDYAFP-TFALAKIEHKNPAVIASELTAKL 58

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
            ++ +   +   G  +IN  +  + L    L  ++    +YG     +G    I+  S N
Sbjct: 59  -VNDNFAEIVAVGP-YINFAIDHAKLVSVTLKKVLADQDKYGDQDTNQGNVP-IDMSSPN 115

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALY 190
              PM +GH R  V+G+++A ++   G+   +  Y+ D G Q   L  +   W  ++A+ 
Sbjct: 116 IAKPMSMGHLRSTVIGNSIAKILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVK 175

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRD 247
            +       YY   + +       +          EE   + + + + +   ++ +  R 
Sbjct: 176 KDPITNLFHYYVKFHEEAEKDPKLEDEGRAWFKKLEEGDAEAVELWQWFREVSLQEFNRI 235

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             K L +  D +  E  F+      ++ ++D L  +  ++E       S+  Q  D+D  
Sbjct: 236 -YKELGVTFDSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLDD- 282

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKR 366
                     D+    +LKSDG+  Y   DLA     K E  F   +YV G++ SG+ K+
Sbjct: 283 ----------DENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQ 332

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------------ 408
           L+ V   +     + ++       + ++G   K+S R G+ +                  
Sbjct: 333 LKQVLGKMGYDWQK-DIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIE 389

Query: 409 -------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                      V  +VG  +V F  L  +  +  DF+  +V  + + +   YVQY  AR 
Sbjct: 390 AKNPNLANKEQVAHQVGVGAVIFHDLKNERLDNFDFNLNEVV-RFEGDTGPYVQYTNARA 448

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           +SI R+A     D    L            D     +   +A++P +I+ A    EP  +
Sbjct: 449 QSILRKANVAIDDTKLALS-----------DDWAFAVAKDIADFPAIIQKAFEKFEPSVI 497

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +L+  F+ ++++      +R +  ++      RL LV A + ++   L ++GV++
Sbjct: 498 AKYSLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDA 549

Query: 582 PNEM 585
           P EM
Sbjct: 550 PKEM 553


>gi|257884328|ref|ZP_05663981.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820166|gb|EEV47314.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 563

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 118/604 (19%), Positives = 241/604 (39%), Gaps = 74/604 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +       +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDAVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + +  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISEKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKI 244
           A+     ++L   Y     +     EL ++  +      E  E+ + + + +  ++M K 
Sbjct: 181 AVKAEPINELLRLYVQFHEVAETEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESM-KE 239

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L ++ D    E  ++      + +I+  L  +  + E        K  +  D+
Sbjct: 240 FNKIYDLLEVRFDSLNGEAFYN----DKMDEIVKLLEEKHLLNE-------DKGAEIVDL 288

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
               L              + KSDG+  Y   DLA    +     F   +YV+G++ S +
Sbjct: 289 SAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQSYH 338

Query: 364 VKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIKMS 401
            K+L+AV   +    +                           L E++         ++S
Sbjct: 339 FKQLKAVLKEMGFDWSDDMHHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKEQIS 398

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +AR 
Sbjct: 399 EKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTHARA 457

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+  +A           F  +     +  D +  +++  + +YP  + +A    EP  +
Sbjct: 458 VSLLEKAG----------FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVI 507

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A +   LA  F+ +++H +           + +    RL LV+AV  ++   L ++G+ +
Sbjct: 508 AKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLRLLGLHA 559

Query: 582 PNEM 585
           P++M
Sbjct: 560 PDKM 563


>gi|69246787|ref|ZP_00604116.1| Arginyl-tRNA synthetase, class Ic [Enterococcus faecium DO]
 gi|257878540|ref|ZP_05658193.1| arginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883175|ref|ZP_05662828.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257889263|ref|ZP_05668916.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260560126|ref|ZP_05832304.1| arginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293560155|ref|ZP_06676658.1| arginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294620321|ref|ZP_06699637.1| arginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|314937490|ref|ZP_07844823.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942149|ref|ZP_07849003.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947511|ref|ZP_07850926.1| arginyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951498|ref|ZP_07854547.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992588|ref|ZP_07858006.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995477|ref|ZP_07860577.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195078|gb|EAN09539.1| Arginyl-tRNA synthetase, class Ic [Enterococcus faecium DO]
 gi|257812768|gb|EEV41526.1| arginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818833|gb|EEV46161.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257825623|gb|EEV52249.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260073961|gb|EEW62285.1| arginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291593433|gb|EFF24991.1| arginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291605888|gb|EFF35319.1| arginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590311|gb|EFR69156.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592880|gb|EFR71725.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596338|gb|EFR75183.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599072|gb|EFR77917.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313643131|gb|EFS07711.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313646061|gb|EFS10641.1| arginyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 563

 Score =  365 bits (936), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 121/607 (19%), Positives = 241/607 (39%), Gaps = 80/607 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +       +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDAVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
           A+       P      +Y++    E+A+      LN     W   +++    ++Q     
Sbjct: 181 AVKAE----PINELLRLYVQF--HEVAETEPE--LNEEARAWFKRLEEGDKEAIQLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + +K  N  +D+     D   G+      + +I+  L  +  + E        K  + 
Sbjct: 233 RDESMKEFNKIYDLLEVRFDSLNGEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLSAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           S + K+L+AV   +    +                           L E++         
Sbjct: 336 SYHFKQLKAVLKEMGFDWSDDMHHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKE 395

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++S++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +
Sbjct: 396 QISEKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTH 454

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+  +A           F  +     +  D +  +++  + +YP  + +A    EP
Sbjct: 455 ARAVSLLEKAG----------FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A +   LA  F+ +++H +           + +    RL LV+AV  ++   L ++G
Sbjct: 505 SVIAKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLRLLG 556

Query: 579 VESPNEM 585
           + +P++M
Sbjct: 557 LHAPDKM 563


>gi|261208154|ref|ZP_05922828.1| arginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566203|ref|ZP_06446636.1| arginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|260077588|gb|EEW65305.1| arginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161981|gb|EFD09848.1| arginyl-tRNA synthetase [Enterococcus faecium D344SRF]
          Length = 563

 Score =  365 bits (936), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 119/604 (19%), Positives = 241/604 (39%), Gaps = 74/604 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +       +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDAVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEE 180

Query: 188 ALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKI 244
           A+     ++L   Y     +     EL ++  +      E  E+ + + + +  ++M K 
Sbjct: 181 AVKAEPINELLRLYVQFHEVAETEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESM-KE 239

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L ++ D    E  ++      + +I+  L  +  + E        K  +  D+
Sbjct: 240 FNKIYDLLEVRFDSLNGEAFYN----DKMDEIVKLLEEKHLLNE-------DKGAEIVDL 288

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
               L              + KSDG+  Y   DLA    +     F   +YV+G++ S +
Sbjct: 289 SAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQSYH 338

Query: 364 VKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIKMS 401
            K+L+AV   +    +                           L E++         ++S
Sbjct: 339 FKQLKAVLKEMGFDWSDDMHHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKEQIS 398

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +AR 
Sbjct: 399 EKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTHARA 457

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+  +A           F  +     +  D +  +++  + +YP  + +A    EP  +
Sbjct: 458 VSLLEKAG----------FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVI 507

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A +   LA  F+ +++H +           + +    RL LV+AV  ++   L ++G+ +
Sbjct: 508 AKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLRLLGLHA 559

Query: 582 PNEM 585
           P++M
Sbjct: 560 PDKM 563


>gi|18977752|ref|NP_579109.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|23822193|sp|Q8U149|SYR_PYRFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18893491|gb|AAL81504.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 629

 Score =  365 bits (936), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 147/657 (22%), Positives = 269/657 (40%), Gaps = 102/657 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +     S +K  ++ I  ++  +    + I          G   T  A  L+R L   PL
Sbjct: 1   MMETIKSEIKRTIEGIVREMAPD--WSEDIQFVDTPSPELGDFGTPVAFQLARLLRKSPL 58

Query: 63  TIAELIVARIKIDPDVD-SVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKG 120
            IA+ I  +   +   +    IA  G++N +L    + K++   ++  G EYGR+ IGKG
Sbjct: 59  IIAQEIAEKFNKNKPKEVKKAIAVNGYVNFFLDYPQISKLVIEAILGYGTEYGRSEIGKG 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E  S NPT P+H+GH R A++GDT+A ++ F GY+V  + YI+D G Q   +   
Sbjct: 119 KKVIVEHTSVNPTKPLHMGHARNAILGDTVARILRFLGYQVEVQNYIDDLGVQFAQVYWG 178

Query: 181 ---VFWRYQQALYNNDSDLPEG---------YYPGVYLKHVGKELADKYSSELLNFPEEK 228
              +  ++ + +      +P+           Y  V  K       +K   EL+   EE+
Sbjct: 179 YLNLKRKFDELMKELKEKIPKNNPIDHVLGLLYVEVNKKIEESSEVEKEIRELMKKLEER 238

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L   K    + ++K   + L +LNI +D+ + E D            I  L +     E
Sbjct: 239 ELNGRKL--AEEVVKAQMETLYSLNIYYDLLVWESDIV--STRLFEKTIKLLEKN----E 290

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER- 347
               P + K      MD  +L         +    L +SDG+ TY   D+AY   K+ + 
Sbjct: 291 NFYTPKEGKYKGAFVMDLSKLFPDM----KNPYLVLRRSDGTATYTGKDIAYHLWKFGKI 346

Query: 348 ----------------------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
                                         D +I V+G++       ++     +  K A
Sbjct: 347 DIDLMYKKWDEHTWTTAPDGEPIPGKFGAGDIVINVIGAEQRHPQLAIKYALELLGYKDA 406

Query: 380 --QINVLLCELVRLYRDGMPIKMSKRAGDFI-------------TLRHVVDE-------- 416
               + L  E V         K S R G ++               + +++E        
Sbjct: 407 AENFHHLAYEHVESPEG----KFSGRKGTWVGFTVDEVIAEAINKAKSLIEEKNPNLTEE 462

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   V   ++R+ ++     + + F +  V     E+   Y+QYA+ARC SI R+A
Sbjct: 463 EKEEIAKKVAVGAIRYTLIKYSPEKKIVFRWEDVLNFEGES-APYIQYAHARCSSILRKA 521

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +++    D+    +  +   ++    E +LI+ L+ +P +++ A    +P+ +A+Y  ++
Sbjct: 522 EELGISTDWKSLLK--VANFNQITEKERELIMLLSRFPEIVQQAGTDLKPHLIAWYANEV 579

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           AS F+  +           ++A    +   RL LV A   ++ + L ++G+E+P++M
Sbjct: 580 ASTFNKFYMDH------PVIKAE-EGVREARLLLVMATRQVLRNSLWLMGIEAPDKM 629


>gi|15679444|ref|NP_276561.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334359|sp|O27496|SYR_METTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2622560|gb|AAB85922.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 560

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 137/617 (22%), Positives = 256/617 (41%), Gaps = 91/617 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F       ++ +     K+ +  K+   I +E P +   G L++  +  L+  L   P+
Sbjct: 1   MFRYIEKEARDSITAALEKLGI--KVPPEIKLEEPPNPQLGDLASTVSFELAGKLRRAPI 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I   I++ I+     +++   G  +IN ++        L   +        +   +  +
Sbjct: 59  EITADIMSVIETPEIFETIESKGP-YINFFVDYGRFSSRLLESIQDD---YGSHPPRDER 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E  SANP GP+H+GH R A++GD+LA ++  +GY+V  +YY+ND G QI  +   + 
Sbjct: 115 VILEHTSANPNGPLHIGHIRNAIIGDSLARILRMAGYDVETQYYVNDMGRQIAMIVWGLL 174

Query: 183 WRYQQALYNNDSDLPE---GYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVK 234
                 L  +  D P     +  G     V + L +         EL+   E      + 
Sbjct: 175 -----NLDGDLEDYPGDKMDHRVGKLYFEVNQRLKENPGIRDEVDELIRKYEAGENEELF 229

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
              V+  +  + + +K L++ HD F+ E  F R     +  +I++L + GY  E  +   
Sbjct: 230 RKVVEYCLSGMEETMKRLHVHHDRFVWEGQFVR--DGTVDRVIESLRKTGYTGENDV--- 284

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                         L       G + +  L +SDG+  Y   D+AY   K E G D +I 
Sbjct: 285 --------------LYLDLEEFGLEKELVLTRSDGTSLYSTRDIAYHLQKSEEG-DVIID 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+GSDH    +++      +  K  +  V+  E + L        MS R G FI++  ++
Sbjct: 330 VLGSDHKLAAEQVGIAVELLGGK--RPEVIFYEFITLPEG----SMSTRRGVFISVDELM 383

Query: 415 DE--------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           DE                          +G+ ++R+ +      + + F +       + 
Sbjct: 384 DEAHSRALHEVKKRRDLPDDVADDIAESIGNGAIRYYIARLSPEKHIVFRWDDALSFERG 443

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
                +QYA+AR   +  +A     +   D +           +  E +L+  LA +P V
Sbjct: 444 --CASIQYAHARACKLLEKASFTGEEDIEDGWKP---------EGDERELVRLLARFPVV 492

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +E + +A+  + +A Y  DLA+ F+  +   R  P    V  ++ +    RL+LV +V  
Sbjct: 493 VEESALARRVHPVAQYAQDLANTFNSFY---RSTP----VIGSDFE--GARLRLVDSVRK 543

Query: 569 IINSGLNIIGVESPNEM 585
            + + LN++G+ +P  M
Sbjct: 544 TLRNALNLLGIHAPETM 560


>gi|32473878|ref|NP_866872.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|39932074|sp|Q7URC7|SYR_RHOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|32444414|emb|CAD74413.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 671

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 144/687 (20%), Positives = 244/687 (35%), Gaps = 118/687 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M+L     +R    L+ +      +       +I    D   G   +NAAM L++ +G  
Sbjct: 1   MHLPNVLQARFVQALEPL-----TDSPSDYAGMIRPAADPKFGDYQSNAAMPLAKRVGKT 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              +A  +V  + +    +   +AG GFINL L  S L   +  +++     G +     
Sbjct: 56  SRDVAAELVQNLNVTDLFEEPEVAGPGFINLRLKDSVLFDSIQQMLLD-ERVGVSKTTDP 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178
            KV ++F S N   PMHVGH R  V+GD LA  + F G +V  + ++ D G Q   +   
Sbjct: 115 KKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTLRFYGEDVVTDNHLGDWGTQFGIIIYG 174

Query: 179 -----------------LSVFWR------YQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
                            LS  +R        Q    + + + +            KE++D
Sbjct: 175 YRNFGDPAKVAANPVPELSALYRLTNQLIEYQKAKQSLATMADKLATAKSDAKTAKEVSD 234

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD---------IFISEDD-- 264
           +  S+    P++K        +    +  I  D+K+L  + D            SE    
Sbjct: 235 QSESDENLKPKDKKKLRKNAEAATRRVASIEADMKSLKAKIDAVDSDTELSKLASEHSDV 294

Query: 265 ----------FHRGDP--------------SPIRDIIDNLARQGY------VYEGILPPP 294
                      H GDP                I  I D L  Q         Y   L   
Sbjct: 295 DVAVLRETAKLHEGDPENLALWKEFLPHCQDEINRIYDRLNVQFDHTLGESFYHDRLAGV 354

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
               T      +        + G D    + K DG++ Y   DLA  + + +    D ++
Sbjct: 355 VDHLTTLGLTTKSDGAICVFLEGFDSPMIIQKRDGAFLYATTDLATLQYRRDEFQPDEIL 414

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ S    + K+  A+A  +   + Q+  +    V L  DG P  M  R+G  I L  +
Sbjct: 415 YVVDSRQGEHFKKFFAMAEPLGMAEVQLVHVNFGTV-LGPDGRP--MKTRSGSLIGLESL 471

Query: 414 V---------------------------------DEVGSDSVRFMMLWRKNSELLDFDFC 440
           +                                 + VG  ++++  L    +    FD  
Sbjct: 472 LNDAVSRAKEVVCNPDRLATMDPPMGGEEQQQIAEIVGIGAIKYADLSHHRTSDYKFDVD 531

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           K+    + N   YVQY+YAR +SI R+A   +  P  +  +         +    +E  L
Sbjct: 532 KMVAL-EGNTATYVQYSYARTQSILRRASDGEGLPAFEQAIEQAAATQPMTFTHPNERSL 590

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + L  +   IE   +   P  L  YL++ A  +         N   R +  ++  +   
Sbjct: 591 ALMLMRFEEAIEQVRLNYAPNALCDYLFETAKTYSSF------NESCRVLGNDDPAVMQT 644

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL LV     ++  GL+++G++    M
Sbjct: 645 RLALVVLTGRVLKKGLSLLGIDVAERM 671


>gi|300173164|ref|YP_003772330.1| arginyl-tRNa synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887543|emb|CBL91511.1| arginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 563

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 133/610 (21%), Positives = 246/610 (40%), Gaps = 84/610 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             +   L ++    K E+  +    +E P+    G ++      L++ L   P  IA  I
Sbjct: 5   EMVVASLAKVLTDFKPEEISMK---LETPKSSEMGDVAF-PTFTLAKVLHQAPQQIATDI 60

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           VA+I      + V   G  ++N +L       KIL  I+     +G N  G G  V I+ 
Sbjct: 61  VAKINQTG-FEKVVAIGP-YVNFFLDKPVTSGKILRLILKEQSHFGSNTDGNGNNVTIDM 118

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
            S N   PM +GH R  V+G+ LA++ A +GY   +  ++ D G Q   L       Y  
Sbjct: 119 SSPNIAKPMSMGHLRSTVIGNALANITAKNGYVPVKINHLGDWGTQFGKLI------YAY 172

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
             + +++++       +   +V      K + + LN     W   ++D    + Q     
Sbjct: 173 KTWGSETEVKADPIATLLRYYVEFHEKAK-NDDTLNDAGRAWFKKLEDGDSEAHQLWQWF 231

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + LK     +D      D   G+      +  ++D L  +G +               
Sbjct: 232 RAESLKEFTAIYDRLDITFDSFNGEAFYNDKMAKVVDVLEEKGLL--------------- 276

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
                 +++  S +        + +SDG+  Y   DLA    + E   F   +YV+G + 
Sbjct: 277 VSSQGAKIVDLSAINSSLTPAMIKRSDGATLYMTRDLAAAVYRKETYHFSKSLYVVGGEQ 336

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
             +  +++AV + +    A  +V       +  +G   KMS R GD + L+ V+D+    
Sbjct: 337 REHFVQMKAVLSLMGFTWAD-DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLDDAHEL 393

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG+ +V F  L    +   DF+  +V  + + +   YVQ
Sbjct: 394 ALKQIQEKNPALENKNIVAEQVGAGAVVFHDLMNDRTNNFDFNLEEVV-RFEGDTGPYVQ 452

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R++     D + DL            D +   ++  L  +P  ++ A   
Sbjct: 453 YTNARAKSILRKSGVTIVDQNLDLD-----------DVATWDIVTILNSFPETVQRAWQQ 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           +E   +A Y  +L+  F+ ++++ +       +  N+++L   RL LV +V+ +++  L 
Sbjct: 502 REASIVAKYALNLSRSFNRYYANSK-------ILTNDQQL-NARLALVQSVSIVLSESLR 553

Query: 576 IIGVESPNEM 585
           ++GV+SP EM
Sbjct: 554 LLGVKSPEEM 563


>gi|293567417|ref|ZP_06678764.1| arginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294620748|ref|ZP_06699955.1| arginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291589814|gb|EFF21615.1| arginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291599728|gb|EFF30738.1| arginyl-tRNA synthetase [Enterococcus faecium U0317]
          Length = 563

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 121/604 (20%), Positives = 243/604 (40%), Gaps = 74/604 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +       +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDAVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEE 180

Query: 188 ALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKI 244
           A+     ++L   Y     +     EL ++  +      E  E+ + + + +  ++M K 
Sbjct: 181 AVKAEPINELLRLYVQFHEVAETEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESM-KE 239

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L ++ D    E  ++      + +I+  L  +  + E        K  +  D+
Sbjct: 240 FNKIYDLLEVRFDSLNGEAFYN----DKMDEIVKLLEEKHLLNE-------DKGAEIVDL 288

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
               L              + KSDG+  Y   DLA    +     F   +YV+G++ S +
Sbjct: 289 SAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQSYH 338

Query: 364 VKRLEAVAAAVSEKKAQI----------------------NVLLCELVRLYRDGMPIKMS 401
            K+L+AV   +    +                         VLL E++         ++S
Sbjct: 339 FKQLKAVLKEMGFDWSDDMRHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKEQIS 398

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +AR 
Sbjct: 399 EKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTHARA 457

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+  +A           F  +     +  D +  +++  + +YP  + +A    EP  +
Sbjct: 458 VSLLEKAG----------FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVI 507

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A +   LA  F+ +++H +           + +    RL LV+AV  ++   L ++G+ +
Sbjct: 508 AKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLRLLGLHA 559

Query: 582 PNEM 585
           P++M
Sbjct: 560 PDKM 563


>gi|294614205|ref|ZP_06694124.1| arginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291592864|gb|EFF24454.1| arginyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 563

 Score =  364 bits (934), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 118/604 (19%), Positives = 242/604 (40%), Gaps = 74/604 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +    +  +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDVVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEE 180

Query: 188 ALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKI 244
           A+     ++L   Y     +     EL ++  +      E  E+ + + + +  ++M K 
Sbjct: 181 AVKAEPINELLRLYVQFHEVAETEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESM-KE 239

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L ++ D    E  ++      + +I+  L  +  + E        K  +  D+
Sbjct: 240 FNKIYDLLEVRFDSLNGEAFYN----DKMDEIVKLLEEKHLLNE-------DKGAEIVDL 288

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
               L              + KSDG+  Y   DLA    +     F   +YV+G++ S +
Sbjct: 289 SAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQSYH 338

Query: 364 VKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPIKMS 401
            K+L+AV   +    +                           L E++         ++S
Sbjct: 339 FKQLKAVLKEMGFDWSDDMHHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKEQIS 398

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           ++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +AR 
Sbjct: 399 EKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTHARA 457

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+  +A  +  +              +  D +  +++  + +YP  + +A    EP  +
Sbjct: 458 VSLLEKAGFVPLE----------TADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVI 507

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A +   LA  F+ +++H +           + +    RL LV+AV  ++   L ++G+ +
Sbjct: 508 AKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKEDLRLLGLHA 559

Query: 582 PNEM 585
           P++M
Sbjct: 560 PDKM 563


>gi|45198315|ref|NP_985344.1| AFL206Cp [Ashbya gossypii ATCC 10895]
 gi|44984202|gb|AAS53168.1| AFL206Cp [Ashbya gossypii ATCC 10895]
          Length = 648

 Score =  364 bits (934), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 134/628 (21%), Positives = 241/628 (38%), Gaps = 96/628 (15%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+    ++NY+ +   +I      L    +E       G L      +  R  G +P  +
Sbjct: 70  ANVVDLIRNYITDELSRISGVAGPLIYEALEWTNTLERGDLLIPVPRL--RIKGSNPKDL 127

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKV 123
           A            +D V  A   FI  +  P +L  ++   ++    +YG   + +  KV
Sbjct: 128 AAEWAVAFPCGEYLDRVE-ANGSFIQFFFKPQFLFNVVVPDVLTRKEDYGSCKLVENKKV 186

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-F 182
            IEF S N   P H GH R  ++G  L++L    G+EV R  Y+ D G Q   LA+    
Sbjct: 187 IIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKMGWEVIRMNYLGDWGKQFGLLAVGFEK 246

Query: 183 WRYQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEE 227
           +  ++AL  +    P  +   VY+   K + +E             A  Y  ++ +   E
Sbjct: 247 YGSEEALEKD----PINHLFDVYVRVNKDIEQEGDSLPLEESTNGRARAYFKKMEDGDPE 302

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             L I + +   ++ K I D    LNIQ+D++  E    +     + + +     +G  +
Sbjct: 303 A-LKIWQKFRELSIQKYI-DTYARLNIQYDVYSGESQVKK---ESMENALKLFQEKGLTH 357

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYE 346
           E                D+  +L   T     + +  + KSDG+  Y   D+     +YE
Sbjct: 358 E----------------DKGAILIDLTKFNKKLGKTIVQKSDGTTLYLTRDVGAAMDRYE 401

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +  FD MIYV+      +  +   +   +  K A       E +     GM   MS R G
Sbjct: 402 KYKFDKMIYVIACQQDLHTAQFFEILKQMGHKWA-------ENLHHVNFGMVQGMSTRKG 454

Query: 406 DFITLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDF 437
             + L ++++E                            VG  +V    +  K     +F
Sbjct: 455 TVVFLDNILEETKEKMHEVMRKNEVKYAQVENPDEVADLVGISAVMIQDMQAKRINNYEF 514

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            + ++    + +   Y+QYA++R RS+ R A +I P+                 + + + 
Sbjct: 515 KWERMLSF-EGDTGPYLQYAHSRLRSVERNASEITPE------KWVTADFSVLTEAAAVT 567

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LA+YP V+ NA    EP  +  YL+ L       +        + +V     ++  
Sbjct: 568 LVRLLAQYPDVLRNALKTHEPATIVTYLFKLTHQVSSCYD-------ILWVAGQAPEVAT 620

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L  +   ++N+G+ ++G+   + M
Sbjct: 621 ARLALYASCRQVLNNGMRLLGLTPVDRM 648


>gi|229828295|ref|ZP_04454364.1| hypothetical protein GCWU000342_00353 [Shuttleworthia satelles DSM
           14600]
 gi|229792889|gb|EEP29003.1| hypothetical protein GCWU000342_00353 [Shuttleworthia satelles DSM
           14600]
          Length = 588

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 112/629 (17%), Positives = 224/629 (35%), Gaps = 88/629 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             +    +   +         ++K+    V  RP  C       N AM  ++     P  
Sbjct: 1   MQELLELISERVANAFEAAGYDRKLGRVTVSNRPDLCE---YQCNGAMAGAKTYHKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ I   +  D    S      GF+N+ +S  +L    + +       G         +
Sbjct: 58  IADEIADCLSGDEMFASAESVKPGFLNIRVSGDFLADYANQMAADQERLGLEKERNPRSI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+ +  +  F+G +V  + ++ D G Q+  +   +  
Sbjct: 118 IIDYGGPNVAKPLHVGHLRSAIIGEAVKRIARFAGNQVLGDIHLGDWGLQMGLIITELRE 177

Query: 184 RYQ---------QALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPEE 227
           R           Q  Y  ++         +Y        +  G   A   ++  L     
Sbjct: 178 RKPDLVYFDADYQGAYPEEAPFTISELEEIYPCASGKSKEDEGYHAAAMQATNELQQGRR 237

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +  ++ ++ ++  +  ++ + + L++  D+++ E D        I  +++ + R G+ Y
Sbjct: 238 GYQALL-EHILRVSVSDLKKNYEKLSVSFDLWMGESDAQPY----IPAMVEKMKRDGFAY 292

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
                           +    L+       D  + P   +LKSDGS  Y   DLA    +
Sbjct: 293 ----------------LSEGALVVDVAEGSDTKEMPPCMILKSDGSALYNTTDLATLVMR 336

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSK 402
            ER   D +IYV+      +  +   VA        +   V L       RDG P K   
Sbjct: 337 EERYQPDEIIYVVDKRQELHFTQCFRVARKTKIVPPETGLVFLGFGTMNGRDGKPFK--T 394

Query: 403 RAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLD 436
           R G  + L +++                          + VG  ++++  L  + S+   
Sbjct: 395 RDGGVMRLENLLADVNAKMLEKILEGGHMQKEEAGRTAEIVGLAALKYGDLSNQASKDYV 454

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +     + N   Y+ Y   R +SI ++ ++        + P            SE 
Sbjct: 455 FDLDRFTSA-EGNTGPYILYTIVRIKSILKRYEEENSLEGLRVLPPA--------SPSEK 505

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+   A +      A     P+KL  Y+Y+L++ F+  +         + +   + +  
Sbjct: 506 DLMQLAARFGDNFRTAYEELAPHKLCAYIYELSNAFNRFYH------ETKILSEEDEEKK 559

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + L+     I+   ++++G  +P  M
Sbjct: 560 ASWIALLSLTKRILEKSIDLLGFAAPERM 588


>gi|225568686|ref|ZP_03777711.1| hypothetical protein CLOHYLEM_04764 [Clostridium hylemonae DSM
           15053]
 gi|225162185|gb|EEG74804.1| hypothetical protein CLOHYLEM_04764 [Clostridium hylemonae DSM
           15053]
          Length = 594

 Score =  363 bits (933), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 122/626 (19%), Positives = 236/626 (37%), Gaps = 88/626 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  ++E   K   ++      +  RP  C       N AM  ++     P  IA 
Sbjct: 10  IIDLIEKEMEEAFEKAGYDRAYAKVTLSNRPDLCE---YQCNGAMAGAKTYRKAPAVIAS 66

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            + A +     +        GFIN+ L  S++   L+ +       G +   +   + ++
Sbjct: 67  EVTANLAKSACIKEAEAVNPGFINIRLKESFVADYLNGMNED-HALGLSRAEEPKMIIVD 125

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G++L  +    G+EV  + ++ D G Q+  +   +  R  
Sbjct: 126 YGGPNVAKPLHVGHLRSAIIGESLKRIARAMGHEVLGDIHLGDWGYQMGLIITELKSRRP 185

Query: 187 QALYNNDS---DLPEGY------YPGVYLKHVGKELADKYSSE-------LLNFPEEKWL 230
           +  Y +DS   + PE           +Y    G+   D+   E       LL      + 
Sbjct: 186 ELPYFDDSFDGEYPEDAPFTISELEEIYPTASGRAKEDEAYREQALNATYLLQNGHRGYT 245

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            I  ++ +   +  ++ + + L++  D++  E D  +     I D++  L  +GY +   
Sbjct: 246 AIW-NHIMNVSVADLKKNYENLDVCFDLWKGEADAQKY----IPDMLRRLKEEGYAH--- 297

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE- 346
                        MD   L+       D  + P   + KSDG+  Y   DLA    + E 
Sbjct: 298 -------------MDDGALVIDVQEETDTKEVPPCMIQKSDGASLYGTTDLATLVQREED 344

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAG 405
              D +IYV+      +  ++   A        +  +  L       +DG P K   R G
Sbjct: 345 YHPDEIIYVVDKRQELHFVQIFRAAKKAGIVPEETKLRFLGFGTMNGKDGKPFK--TREG 402

Query: 406 DFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             + L +++ E                          VG  ++++  L  + S+   FD 
Sbjct: 403 GVMRLENLIAEIEEEMYKKISDNRTVSEENAARTAKTVGMSAIKYGDLSNQASKDYVFDV 462

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SI  + ++    L       + I  +     SE  L+
Sbjct: 463 DRFTSF-EGNTGPYILYTIVRIKSILNKYEENGGTL-------SGIKMQGVCSESEKALM 514

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           +  A Y  VI+ A     P+K+  Y+YDLA+VF+  +         + +   +       
Sbjct: 515 LEAARYSEVIQTAFEELAPHKICAYIYDLANVFNRFYH------ETKILAQEDENRKSSC 568

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L+     ++ + ++++G E+P  M
Sbjct: 569 IALLVLTKRVLEACIDLLGFEAPERM 594


>gi|241896416|ref|ZP_04783712.1| arginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870396|gb|EER74147.1| arginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 561

 Score =  363 bits (933), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 131/610 (21%), Positives = 255/610 (41%), Gaps = 80/610 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++   +  +  ++     IL +  IE P+D + G  +     +L++   + P  IA
Sbjct: 2   DYKNQIAETIAAVVPELD-NATILSK--IEVPKDASMGDYAF-PTFLLAKARRMAPQQIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             IV+ I  D   + V   G  ++N +L  +       + V+   +YG N  G+   + I
Sbjct: 58  TNIVSEIATDGFKE-VKAVGP-YVNFFLDQAQFGADTLAEVLRQTDYGHNTDGEAGHITI 115

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WR 184
           +  S N   PM +GH R  V+G++LA +   +GY+  +  ++ D G Q   L  +   W 
Sbjct: 116 DMSSPNIAKPMSMGHLRSTVIGNSLAEIAKANGYQPIKINHLGDWGTQFGKLMSAYKRWG 175

Query: 185 YQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAM 241
            ++ +  +  +    YY   + +     EL D+  +        +E+   +   +  ++ 
Sbjct: 176 SEEEVKADPINTLVKYYVRFHKEAETQPELNDEGRAWFKKLEDGDEEAHELWSWFREES- 234

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +K   +    L+I  D F  E  ++      +  +ID L  +  + E       S+  Q 
Sbjct: 235 LKEFMELYNDLDIDFDSFNGEAFYN----DKMDAVIDTLKEKHLLVE-------SQGAQV 283

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDH 360
            D++ + L              + ++DG+  Y   DLA     K    F   +YV+G + 
Sbjct: 284 VDLEDEGLNVA----------MIQRTDGATLYMTRDLAAAIFRKNNYNFVKSLYVVGGEQ 333

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------ 414
             +  +++AV   +  + +  ++       +  DG   K+S R+G  I L+ V+      
Sbjct: 334 REHFMQMKAVLKKMGYEWSD-DIEHIPFGMITVDGK--KLSTRSGRIILLKDVLADSVKL 390

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                               EVG+ +V F  L  +     DF   +V  + + +   YVQ
Sbjct: 391 ATAQIDEKNPNLANKEVVAHEVGTGAVVFHDLMNERLGNFDFKLEEVV-RFEGDTGPYVQ 449

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y  AR +SI R+A    P+LD +    +        D    +    +A +  ++  A   
Sbjct: 450 YTNARAQSILRKAGK--PELDLNNLSID--------DEQVWETEKLVASFNDIVRRAWRD 499

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           +EP  +A Y  +LA  F+ ++++ +       +   + +L   RL LV AV+ ++   L 
Sbjct: 500 REPSVIAKYSLNLARAFNKYYANSK-------ILVEDDQL-NARLALVTAVSYVLTESLR 551

Query: 576 IIGVESPNEM 585
           ++GV++P EM
Sbjct: 552 LLGVKAPKEM 561


>gi|225574920|ref|ZP_03783530.1| hypothetical protein RUMHYD_02999 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037888|gb|EEG48134.1| hypothetical protein RUMHYD_02999 [Blautia hydrogenotrophica DSM
           10507]
          Length = 588

 Score =  363 bits (933), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 115/631 (18%), Positives = 234/631 (37%), Gaps = 98/631 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   L     K   +       V  RP  C       N AM  ++     P+ IA+
Sbjct: 4   MMDLLAQELSAAFEKAGYDSSYGRVTVSNRPDLCE---YQCNGAMAGAKAYHKAPIVIAQ 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V ++              GFINL +  ++L   L  +  + +  G         + I+
Sbjct: 61  DVVEKLSDSQVFSMAEAVKPGFINLKIKETFLSGYLQKMHTAQL-LGAEKTQNPKTIIID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++  +  F G+E+  + ++ D G Q+  +   +  R  
Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHEMIGDVHLGDWGLQMGLIITELKHRQP 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ------- 239
           + +Y ++S      Y G Y K     + +          + K     ++ +++       
Sbjct: 180 ELVYFDES------YEGEYPKEAPFTIGELEEIYPAASAKSKGDESFREEALEATHLLQQ 233

Query: 240 ------AMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                 A+   I        + + + LN+  D++  E D        I  +++ +  +GY
Sbjct: 234 GRPGYMALWNHIMRVSVTDLKKNYEKLNVTFDLWKKESDAQPY----IPAMVEEMREKGY 289

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFK 342
            Y                MD+  L+       D  + P   +LKSDG+  Y   DLA   
Sbjct: 290 AY----------------MDQGALVVDVKEETDTKEVPPCMILKSDGASLYTTTDLATIV 333

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKM 400
            + +    D ++YV+      +  ++   A        +  +  L       +DG P K 
Sbjct: 334 EREKLFHPDEILYVVDKRQEMHFVQVFRCAKKTGLLPQETKLSFLGFGTMNGKDGKPFK- 392

Query: 401 SKRAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSEL 434
             R G  + L H++++                          VG  ++++  L  + ++ 
Sbjct: 393 -TREGGVMRLEHLIEDINEEMFHKIVENRSVKDKDARQTAQIVGLSAIKYGDLSNQATKD 451

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             FD  +     + N   Y+ Y   R +SI  + +    D +               + S
Sbjct: 452 YIFDIDRFTSF-EGNTGPYILYTIVRIKSILNRYEQENKDTENGEILEAA-------NES 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++ L  +P V+E A   + P+K+  Y+Y+LA+ F+  +         + +   + +
Sbjct: 504 EKVLMLALTGFPAVVEGAFEEKAPHKVCSYIYELANAFNRFYH------ETKILSEEDER 557

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +Q++     ++ + ++++G  +P  M
Sbjct: 558 QKASWIQVLLLTRKVLETSIDLLGFSAPERM 588


>gi|170584080|ref|XP_001896849.1| arginyl aa-tRNA synthetase protein 1, isoform b [Brugia malayi]
 gi|158595812|gb|EDP34311.1| arginyl aa-tRNA synthetase protein 1, isoform b, putative [Brugia
           malayi]
          Length = 732

 Score =  363 bits (932), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 131/640 (20%), Positives = 252/640 (39%), Gaps = 95/640 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIK---VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-- 57
           +  DF S L   L+ I  +       +     I+I   +    G    N++M +++ L  
Sbjct: 131 IVKDFGSSLLCMLRAIFLESVSKLYPEMSDIPILITETQQIKFGDYQFNSSMSIAQKLLR 190

Query: 58  ---GLDPLTIAELIVARIKIDPDVDSV-----FIAGKGFINLYLSPSYLRKILSSIVVSG 109
               + P  +A  I+  +     ++        ++G G+IN++L+ S++   +++I + G
Sbjct: 191 NGQKISPQEVARKILDNLPECDRIEKAIKLIMEVSGPGYINIFLNRSWIATSITNIALKG 250

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           IE     + +  +V ++F S N    MHVGH R  ++GD+++ L+ + G++V R  +I D
Sbjct: 251 IEVP---VIEKRRVLVDFSSPNIAKQMHVGHLRSTIIGDSISRLLTYVGFDVLRLNHIGD 307

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            G Q   L   +   +   +                      +L   Y      F E++ 
Sbjct: 308 WGTQFGMLIAHLQDCFPNFINEVPP---------------ISDLQAFYKESKKRFDEDEA 352

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGY-VY 287
                   V  +     D LKA  +  D+        R D S I D +D N+  +G   Y
Sbjct: 353 FKARAYQCVTKLQSFDPDFLKAWQMICDV-------SRKDFSQIYDRLDINIVERGESFY 405

Query: 288 EGILPPPKSKTTQ--KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344
           +  +     +  +    ++D  + + +   + + V   ++KSDG +TY  +DLA  K + 
Sbjct: 406 QKHMVELVEELDKLGVLELDEGRKILK---LSEGVPLTVVKSDGGFTYDTSDLAALKYRL 462

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +    D +IYV+ +  S + + L A    +         +      L       K   R+
Sbjct: 463 FVDKADWIIYVVDAGQSLHFELLYAAGQKLGWYSPSEKRVELVSFGLVLGEDKKKFKTRS 522

Query: 405 GDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELL 435
           GD + L  ++DE                             V    V++  L +  ++  
Sbjct: 523 GDSVRLTDLLDEGVKRAEAKLQEKERDKVMIPEELALARDAVAYGCVKYADLSQTRTQDY 582

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDT 493
            F F ++ +  + N   Y+ YA+AR +SI R +     D+       P  ++P E +   
Sbjct: 583 VFSFDRMLD-DRGNTAVYLLYAFARIQSICRNSGVSEEDIHNYLQSLPNGLLPLEHK--- 638

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +L   + ++   I N       ++L  Y+Y LA+ FH  ++          +Q +  
Sbjct: 639 SEFRLAKTILKFTDCILNTLDNFLLHQLCDYVYSLATTFHDFYNECY------VIQKDTD 692

Query: 554 KLTMM--------RLQLVHAVASIINSGLNIIGVESPNEM 585
            +           RL L    A+I+     I+G+++  +M
Sbjct: 693 GMYFALISLAINTRLVLCKVTAAIMADCFKILGLKTVEKM 732


>gi|227501367|ref|ZP_03931416.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216466|gb|EEI81876.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 565

 Score =  363 bits (932), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 123/611 (20%), Positives = 232/611 (37%), Gaps = 75/611 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   +   L++ D  +  ++      +IE P     G  S      L+R +  +P  
Sbjct: 1   MTDFKENIAKELEKKDIGLTFDEIYK---LIEIPPQDNMGDYSF-PCFSLARTMRKNPAI 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE + + + +    + +      ++N Y+    +  + L+ I+    +Y  + IGKG  
Sbjct: 57  IAEELASSLDLKA-FEKIENLNA-YVNFYVDRKMFEEETLNEIIEKKEKYASSDIGKGKN 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           + +EF S N   P H+GH R  V+GD L ++  F GY      YI D G Q  T+  +  
Sbjct: 115 IVVEFSSVNIAKPFHIGHIRSTVIGDALRNIHKFLGYNTIASNYIGDYGTQFGTMIKAYK 174

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--Q 239
            W     L  +        Y     +    E   + +       E+     V+ +S   +
Sbjct: 175 LWGDDDKLRKSPIKELLNLYVRYNTEAENDEKMKEDARLEFKNLEDGQEEAVRLWSWFKE 234

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              K      K L+I  D +  E          I  +I+ L  +  + E           
Sbjct: 235 ISFKEFDRVYKMLDIDFDNYNGE----AYHSEFIPKVIEELKEKDLLVES---------- 280

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
                    L+   +   D     ++KS+GS  Y   D+A    + +   FD  +YV+ +
Sbjct: 281 ------DGALIVDLSEF-DLPPSIVIKSNGSSAYITRDIATAINRKKVYDFDKNLYVVAT 333

Query: 359 DHSGYVKRLEAVAAAVSEK-----------------------KAQINVLLCELVRLYRDG 395
             + +  +L A+   +                          K Q+ V L +++    + 
Sbjct: 334 QQNLHFDQLFAILKLMGYDFYKDCKHVSFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIEK 392

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
               M  R  +   +      VG  +V+F  L+    +   FD+ +V     E    Y+Q
Sbjct: 393 TKEVMESRHTEIEDIEETAKIVGIGAVKFQELYNNRIKDYVFDWDEVLNFDGE-TGPYIQ 451

Query: 456 YAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           Y YAR +S+ R+A  +    ++F     +           E  L+  LA +  ++  A  
Sbjct: 452 YTYARAKSVLRKAGFEKAEKMNFTKITSD----------EEFALVKSLANFKDIVIKACE 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  +L ++A  F+  ++  +       V   ++++   RL L +A + +I  GL
Sbjct: 502 KYEPSLITRHLTEIAKNFNKFYNTCQ-------VNVEDKEVKEERLALTYASSLVIKIGL 554

Query: 575 NIIGVESPNEM 585
            ++G+++  +M
Sbjct: 555 GLLGIKTVEKM 565


>gi|197303752|ref|ZP_03168789.1| hypothetical protein RUMLAC_02482 [Ruminococcus lactaris ATCC
           29176]
 gi|197297272|gb|EDY31835.1| hypothetical protein RUMLAC_02482 [Ruminococcus lactaris ATCC
           29176]
          Length = 591

 Score =  363 bits (931), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 118/625 (18%), Positives = 243/625 (38%), Gaps = 86/625 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   +KE   K    +++    +  RP  C       N AM  ++     P+ IAE
Sbjct: 7   LLELITIEMKEAFVKAGYGEELARVTLSNRPDLCE---YQCNGAMAGAKKYKKAPIMIAE 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA +              GFINL L P ++ + L+ +       G     +   V I+
Sbjct: 64  DVVANLAESQCFAQAEAVKPGFINLKLKPEFVAEYLNEMAAD-ENLGVEKEAEPKTVMID 122

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++  ++ + G +VT + ++ D G Q+  +   +  R  
Sbjct: 123 YGGPNVAKPLHVGHLRSAIIGESIKRIIRYKGNKVTGDIHLGDWGYQMGLIITELKKRQP 182

Query: 187 QALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------KWLP 231
              Y ++S   + PE     +         A  Y+ E  ++ EE            K   
Sbjct: 183 DLPYFDESFGGEYPEEAPFTISELEEIYPTASAYAKEHEDYREEALHATYLLQNGYKGYR 242

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            +  + +   +  ++ + + LN++ D++  E D  +  P     +++ L  +G+ +    
Sbjct: 243 AIWKHIMNVSVTDLKKNYERLNVEFDLWKGEADAQKYIPG----MVEMLKEKGFAHY--- 295

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-R 347
                        D+  L+       D+ + P   +LKSDG+  Y   DLA    + E  
Sbjct: 296 -------------DQGALVVDVAEETDNKEVPPCMILKSDGAALYDTTDLATLVEREELY 342

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGD 406
             D +IYV+      +  ++   A      + +  +  L       +DG P K   R G 
Sbjct: 343 QPDEVIYVVDKRQELHFIQVFRCAKKTGIVRPETELKFLGFGTMNGKDGKPFK--TREGG 400

Query: 407 FITLRHVVD--------------------------EVGSDSVRFMMLWRKNSELLDFDFC 440
            + L +++                           EVG  ++++  L  + S+   FD  
Sbjct: 401 VMRLENLIREIDEEMYKKIMDNRTVEEADARKTAAEVGLAAIKYGDLSNQASKDYIFDVD 460

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +     + N   Y+ Y   R +SI ++  +   + +       ++  E   + +E  L++
Sbjct: 461 RFTSF-EGNTGPYILYTIVRIKSILKKYAENGGNAEG----AKILAAE---NAAEKALML 512

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            + ++  VI+       P+KL  Y+YDLA+ F+  +         + +   +       +
Sbjct: 513 QVLKFNEVIDTVYAETAPHKLCAYIYDLANEFNKFYH------ETKILSEEDEAKKSGYI 566

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L++    ++ + ++++G  +P  M
Sbjct: 567 ALLNLAKKVLETCIDLLGFTAPERM 591


>gi|159035826|ref|YP_001535079.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157914661|gb|ABV96088.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 572

 Score =  363 bits (931), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 130/619 (21%), Positives = 243/619 (39%), Gaps = 81/619 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     + L + L        V    +D ++    R   H     +AA+ L+R LG  
Sbjct: 1   MNL----ETLLADRLGPAFAA--VAGAPVDPVL----RRSQHADYQCDAALSLARRLGRR 50

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  ++ ++++     +V ++G GFINL ++ S L  +LS+  V     G       
Sbjct: 51  PRDIAAEVLGQVELADLCSAVAVSGPGFINLTVADSALGTLLSTAAVD-SRLGVAPSAAT 109

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  V+GD    L+ + G++V +  ++ D G     L   
Sbjct: 110 ETVIVDYSSPNVAKEMHVGHLRGTVIGDAAVRLLEWRGHQVIKANHLGDWGTPFGMLIEH 169

Query: 181 VF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +      +A         + +Y    +K    +   + +   +   +      ++ + + 
Sbjct: 170 LLDLGESEAADELSVGDLDSFYKAARVKFDADDAFRERAQRRVVALQRGDELTLRLWRL- 228

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKS 296
            ++         +  Q  + ++E DF RG+      +  + D L R G + E        
Sbjct: 229 -LVAESEKYFLTVYDQLGVLLTERDF-RGESYYNEQLAPVTDELDRLGLLRES------- 279

Query: 297 KTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
                        +F +  VG D   +   + K DG + Y A DLA  + +  + G   +
Sbjct: 280 --------GDAACVFPAGFVGRDGQPLPIIVRKRDGGFGYGATDLAAIRHRTQDLGATRL 331

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRDGMPIKMS---- 401
           +YV+G     + + + AVA            +      +L    ++ R      +     
Sbjct: 332 LYVVGLPQRQHFELVYAVAWQAGWLSPPARAEHLGFGSILGSDGKMLRSRTGDSIKLVGL 391

Query: 402 -----KRAGDFITLR----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                 RA +    +           V   VG  ++++  L    ++   FD+ ++    
Sbjct: 392 LEEAVTRAAELARQKNPDLSATEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLD 451

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QYA+AR RSIFR+A+        + F    I        +E  L + LA + 
Sbjct: 452 -GNTAPYLQYAHARIRSIFRRAE-------IEQFTPTPITV---GHPAEHALALELAGFG 500

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+ +     + ++LA YL+ LA+ F G + H         ++A +  +   RL L    
Sbjct: 501 AVVASVEQTLQFHRLAGYLHTLATTFSGFYEHC------PVLRAED-AVRDSRLALCDLT 553

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++  GL ++G+ +P+ M
Sbjct: 554 ARVLRQGLYLLGIATPDRM 572


>gi|298710528|emb|CBJ25592.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 906

 Score =  363 bits (931), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 127/590 (21%), Positives = 232/590 (39%), Gaps = 86/590 (14%)

Query: 39  DCAHGHLSTNAAMILSRPLGL------DPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           D  +G    NAAM L + L         P   A  IVA + ++P VD+  ++ +G+IN+ 
Sbjct: 358 DYKNGDFQCNAAMALFKALKGGDGAPSSPQAAASAIVASLPVNPLVDTTSVSPQGYINIR 417

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L P+++ + ++ ++ +G         K  +V ++F S N    MHVGH R  ++G+ +  
Sbjct: 418 LRPAFINQSIAKVIKNG---PAPPEVKKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAICR 474

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVG 210
           ++ F G+ V R  ++ D G Q   L   +   Y   L +  N +DL   Y          
Sbjct: 475 VLEFCGHTVFRHNHVGDWGTQFGMLINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFDES 534

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE--DDFHRG 268
           +E  +   + +++   +   P  K+     +  I R + + +  + D+ + E  + F+  
Sbjct: 535 EEFKEASRNTVVDL--QSGDPACKEVWT-LLCDISRKEFQKVYDRLDVTLEEHGESFYN- 590

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   ID LA  G V                  D    + R           + K D
Sbjct: 591 --DMIPSTIDMLAEAGLVSR----------------DDGADIVRLEHFTY--PLIVRKRD 630

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLC 386
           G + Y + D+   + + +    D +I +  +  + +       A A     +      L 
Sbjct: 631 GGFGYDSTDMTAIRYRLKTLKCDWIIGITDAGQASHFHMCFDAARAAGWVDEGTKLEHLG 690

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------ 416
             V L  DG   K   R+GD + L  ++DE                              
Sbjct: 691 FGVVLGPDGK--KFKTRSGDTVRLVDLLDEAVRRMAASIQERMDEGKMTTTKEAAAAAAA 748

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  +V++  L +  S    F + ++ + ++ N   Y+Q+A+AR  SI  +A+D   +L
Sbjct: 749 EIGYGAVKYYDLRQHPSTSYVFSYDRMLD-TRGNTAVYLQFAHARLASILLKAQD---EL 804

Query: 476 DFDLFPRNVIPQE-SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
             D+      P++ S    SE  L   L  +  VIE       P +L  YLY LA+ F  
Sbjct: 805 HVDVTALKASPEKVSVEHESERALAFELLMFSDVIEACLADLGPNRLCEYLYTLATKFTD 864

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
             ++ R       V  ++      RL L  A    +    +++G+++ + 
Sbjct: 865 FVTNCR-------VLGSDE--QTSRLLLCEATGVTMRKCFSLLGMKALDR 905


>gi|116618315|ref|YP_818686.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271485|sp|Q03WV9|SYR_LEUMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116097162|gb|ABJ62313.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 563

 Score =  363 bits (931), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 126/607 (20%), Positives = 248/607 (40%), Gaps = 80/607 (13%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++   L  +   + +++       +E P+    G ++      L++ L   P  IA  IV
Sbjct: 6   QIVEALNAVLTDLTLQEISEK---LEAPKSSDLGDVAF-PTFTLAKTLHKAPQLIAADIV 61

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFV 128
           A I  +   + V   G  ++N +L        +   V      YG N+ G+G KV I+  
Sbjct: 62  AAIDQEG-FEKVVATGP-YVNFFLDKVATSNQVLKTVFDLEGAYGDNVDGQGAKVTIDMS 119

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQ 187
           S N   PM +GH R  V+G+ LA++ A +GY   +  ++ D G Q   L  +   W  ++
Sbjct: 120 SPNIAKPMSMGHLRSTVIGNALANITAKNGYAPVKINHLGDWGTQFGKLIYAYKAWGSEE 179

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKI 244
            + ++       YY   + K    +  +         L   +E+   + + +  ++ +K 
Sbjct: 180 EVKSDPIATLLKYYVEFHEKAKENDSLNDEGRAWFKKLEDGDEEAHRLWQWFRAES-LKE 238

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             +    L+I  D F  E  ++      +  ++D L  +  +                + 
Sbjct: 239 FSEIYDRLDITFDSFNGEAFYN----DKMDKVVDLLEEKNLL---------------VES 279

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363
              Q++  S +  +     + +SDG+  Y   DLA    + E   F   +YV+G +   +
Sbjct: 280 QGAQIVDLSHINPNLTPAMIKRSDGATLYMTRDLAAALYRKETYDFAKSLYVVGGEQREH 339

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------- 415
             +++AV + +  + +  ++       +  +G   KMS R GD + L+ V+D        
Sbjct: 340 FVQMKAVLSLMGFEWSD-DIEHIAFGLITFNGK--KMSTRKGDVVLLKDVLDDAHELALK 396

Query: 416 -----------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                            EVG+ +V F  L    +   DF+  +V  + + +   YVQY  
Sbjct: 397 QIQEKNPDLGDKDTVAEEVGAGAVVFHDLMNDRTNNFDFNLEEVV-RFEGDTGPYVQYTN 455

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR +SI R+        D +L            D +   +I  L  +P+ ++ A   +E 
Sbjct: 456 ARAKSILRKTSVQLTSDDLNL-----------TDPATWDIITTLNNFPKTVQRAWQQREA 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +A Y  +L+  F+ ++++ +       +   + +L   RL LV +V+ ++   L ++G
Sbjct: 505 SIIAKYALNLSRAFNKYYANSK-------ILTEDVQL-NARLVLVKSVSIVLTESLRLLG 556

Query: 579 VESPNEM 585
           V++P EM
Sbjct: 557 VKAPEEM 563


>gi|227530448|ref|ZP_03960497.1| arginyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227349626|gb|EEJ39917.1| arginyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 566

 Score =  363 bits (931), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 139/615 (22%), Positives = 246/615 (40%), Gaps = 85/615 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   ++ N L      +++ +       IERP+D  +G  +      L++ L   P  IA
Sbjct: 2   DEKLQVANALAVALPDLELNEIEEK---IERPKDSNNGDYAFPTFF-LAKSLHKAPQMIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             ++ +I      D V +AG  +IN +L  +     +L +I+     YG + +G    V 
Sbjct: 58  SELIEKIDQTG-FDKVVVAGP-YINFFLDKANVGAGVLETILNDPEHYGESDLGHKANVT 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFW 183
           I++ S N   PM +GH R  ++G+ +A ++    Y + R  Y+ D G Q    +A    W
Sbjct: 116 IDYSSPNIAKPMGMGHLRSTMIGEAIARILEKVNYNLIRIDYLGDWGTQFGKMMAAYKMW 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAM 241
              Q + +     P      +Y++ +  E AD++          +W   ++  D     +
Sbjct: 176 GDSQEVQDGLKSDPINTLLQLYVR-INTE-ADEHPEYTDAG--REWFAKLEHGDEEAWRL 231

Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSK 297
               R+  L+     +D+   + D   G+      + + I  L  +G +        KS+
Sbjct: 232 WHWFREISLERFQRVYDMLDVKFDSFNGEAFSAQKMEEPIQLLRDKGLL-------KKSR 284

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVM 356
             +  D+++  L              ++KS+G+ TY   DLA     K   G    +YV+
Sbjct: 285 GAEIVDLEQFNL----------PPLLIIKSNGTTTYITRDLATALFRKRMYGHAKSLYVV 334

Query: 357 GSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G++   Y K+L      +      QI  +   L+ L       KMS R G+ ++L  V++
Sbjct: 335 GAEQEVYFKQLRMALKELGFNWWDQIEHISFGLMNL----NGQKMSTRKGNVVSLEDVLN 390

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +                         VG  +V F  L       ++F    V +   E  
Sbjct: 391 DSVDLARKQIAEKNPDLKNADEVAKQVGIGAVIFHDLKNYRRNAVNFKLEDVVKFEGE-T 449

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQYA AR  SI R+        D DL                 +LI  L++Y   ++
Sbjct: 450 GPYVQYARARAESILRKGGIRDFS-DVDLTQVG---------DGAWELISFLSQYGEAVK 499

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A +  +P  +A Y  +LA  F+ +++H R          N+      RL L  AV+ ++
Sbjct: 500 RAALNYDPSVVAKYALELAKKFNQYYAHNRIL--------NDDPQQPARLALTQAVSHVL 551

Query: 571 NSGLNIIGVESPNEM 585
            S L ++ V++P+EM
Sbjct: 552 KSALALLDVKAPDEM 566


>gi|149182270|ref|ZP_01860750.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850039|gb|EDL64209.1| arginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 600

 Score =  363 bits (931), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 137/620 (22%), Positives = 239/620 (38%), Gaps = 93/620 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+  +++ L+ YL     K ++ +      VIE P+    G LS      L++     
Sbjct: 39  MNLYDFYANLLEEYLSGDMTKEEILE------VIETPKFTHQGDLSF-PCFQLAKKKKQA 91

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA  + A +     +     AG  ++N++    +   +I+ +I+  G  YG    G+
Sbjct: 92  PTVIASELAASL-SHSYLLKAEAAGP-YVNIFFDGKTTGTEIMKNILAQGDHYGELSFGE 149

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  + I+  S N   P  +GH R  V+G+++A L    G+E  +  YI D G Q   L  
Sbjct: 150 GKVITIDMSSPNIAKPFSMGHLRSTVIGNSIALLAEKCGFETVKINYIGDWGTQFGKLIT 209

Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           +   W  ++ +  N    P      +Y K       +  +   LN    K   +++D   
Sbjct: 210 AYKKWGDEEKVKAN----PIPELFSLYKKFH----EEAEADPALNDEGRKAFKLLEDGDS 261

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILP 292
             V+       + LKA    +D+     D + G+      +   +  +  +G +      
Sbjct: 262 EVVELWTWFKNESLKAFQEIYDLLGISFDSYHGESFYNDKMEAAVKLIKEKGLL------ 315

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
              S   +   +D K L              + KSDG+  Y   D++    + +   F  
Sbjct: 316 -ETSDGAEVVWLDDKGL----------PPSLIKKSDGATLYATRDISAALYRKKTYDFSQ 364

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +YV+G + + + +++ AV   +    A+  V +   + L       KMS R G  I L 
Sbjct: 365 ALYVVGQEQTIHFRQVFAVLEKLGMPWAEQMVHIPFGLFLQGGK---KMSTRKGRVILLE 421

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            V+ E                         VG+ +V F  L       ++F    +    
Sbjct: 422 EVLKEAIDMALANIKEKNPNLENAEETARWVGTGAVIFHDLKNDRMNDIEFSLEDMLTFE 481

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAEY 505
            E    YVQY  AR +SI R A                +   +  D  E  +LI  L +Y
Sbjct: 482 GE-TGPYVQYTNARAQSILRNAAAQE------------LNHFTGLDDHESWELIKILNKY 528

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +I+ A     P  LA Y+  ++  F+ ++   R       +   N  L   RL LV  
Sbjct: 529 PEIIQEAYETYSPSVLAKYILAVSKAFNKYYGKTR-------ILEENVAL-ASRLVLVKT 580

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  I++ GL ++G+++P +M
Sbjct: 581 VKDILSDGLGLLGIKAPQQM 600


>gi|295108490|emb|CBL22443.1| arginyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 588

 Score =  363 bits (931), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 122/629 (19%), Positives = 243/629 (38%), Gaps = 88/629 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   L     K   + +     V  RP  C       N AM  ++     P  
Sbjct: 1   MKKLMELMAEELASAFEKAGYDPEYGKVTVSNRPDLCE---YQCNGAMAGAKAYKKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ +VA +K         +   GFINL +   +L + L  +     +Y  N   +   +
Sbjct: 58  IADDVVAFLKDSNIFSVAEVVKPGFINLRVKEEFLAEYLCKMAAD-PKYSVNTAEQPKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 IIDYGGPNVAKPLHVGHLRSAIIGESIKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKH 176

Query: 184 RYQQALYNNDS---DLPEGY----------YP---GVYLKHVGKELADKYSSELLNFPEE 227
           R  + +Y +DS   + PE            YP   G              ++  L   + 
Sbjct: 177 RKPELVYFDDSFEGEYPEEAPFTISELEEIYPCASGKSKVDEEYRNEALEATHQLQQGKR 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            ++ +  ++ +Q  +  ++ +   LN+  D++  E D        I D++  +  QG+ Y
Sbjct: 237 GYMALW-NHIMQVSVTDLKRNYNNLNVSFDLWKKESDAQPY----IPDMVQQMKDQGFAY 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
           E                D+  L+       D  + P   LLKSDG+  Y   DLA    +
Sbjct: 292 E----------------DQGALVVDVKEESDTKEIPPCMLLKSDGASLYTTTDLATIVER 335

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSK 402
            +    D ++YV+      +  ++   A      K +  +  L       +DG P K   
Sbjct: 336 VKLFDPDEILYVVDKRQELHFIQVFRCARKTGLVKPETELSFLGFGTMNGKDGKPFK--T 393

Query: 403 RAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLD 436
           R G  + L +++                          + VG  ++++  L  + ++   
Sbjct: 394 RDGGVMRLENLIADIDEEMFHKIVENRSVKDQDAKETAEIVGLSAIKYGDLSNQATKDYV 453

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +     + N   Y+ Y   R +SI  + K+   +LD       V       + S+ 
Sbjct: 454 FDIDRFTSF-EGNTGPYILYTIVRIKSILNRYKEEGGNLDAGEILPAV-------NASQK 505

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ L ++   IENA   + P+K+  Y+Y++++ F+  +         + +   ++   
Sbjct: 506 NLMLELTKFGSTIENAFEEKAPHKICAYIYEVSNAFNSFYH------ETKILSEEDQAQK 559

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L+L+     I+ + ++++G  +P+ M
Sbjct: 560 ESFLKLLGLTKDILETSIDLLGFSAPDRM 588


>gi|268323984|emb|CBH37572.1| arginyl-tRNA synthetase [uncultured archaeon]
          Length = 558

 Score =  363 bits (931), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 154/612 (25%), Positives = 264/612 (43%), Gaps = 83/612 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +F + ++  LK+       E K L+ +      +  H  L++  A  L+R     P 
Sbjct: 1   MFLEFKAEVEKVLKQALASY--EYKDLEIV------ESDHADLASTVAFSLARSCKRAPK 52

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE IV  +  +  + S  +A   +IN Y+S  +L K L   + +G+E    +     K
Sbjct: 53  EIAEDIVNHLPAENTLISHAVATGPYINFYVSDFFLHKTL-QRLRAGLE---TVEKNKGK 108

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + IE  SAN  GP+H+GH R A++GD LA ++  +G++V  +YY+ND G QI        
Sbjct: 109 IIIEHTSANADGPLHIGHLRNAIIGDVLARVLKRAGFDVETQYYVNDLGRQIAVAVWGAG 168

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQA 240
                     D  + + Y           E       EL+   E      V+ Y   V  
Sbjct: 169 RMAFATDKKADHAVADVYIAANRELEEHSEYVSAV-EELMRKYEAGDDATVRRYETVVNT 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +++ LK LNI+HD+F+ E +F R     +  +++ L ++G V              
Sbjct: 228 CLTGVKETLKRLNIKHDLFVLEGEFVR--SGAVDAVVNELMQKGDV-------------- 271

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
              +D   LL +  + G + +  + +SDG+  Y   DLAY + K  R  D MI V G DH
Sbjct: 272 --KLDGTALLLQ--LGGIEKELVIKRSDGTSLYTTRDLAYHRWKSNR-CDRMIDVFGKDH 326

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
               ++L    A +S K      ++   V L        +S RAG +I+   ++++    
Sbjct: 327 ELVSQQLTKALALLSVKAP--EYVIFAFVSLPSG----SLSTRAGRYISADELIEKIEER 380

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  ++R+ M+     + + FDF    +  K+    +
Sbjct: 381 AYYEVEKRRDDLDEVTKPEIARMVGIGALRYDMVKVSPDKHIVFDFDDALDIEKKG-APF 439

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY++AR  SI R A       D D             + SEL+LI  L+++  +I    
Sbjct: 440 VQYSHARACSILRAAAAKGVLSDDDYDSA------LLREDSELELIKMLSKFDYLIAGVA 493

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P+++A Y  +LA  F+  +   R  P L      + +    RL LV     ++++ 
Sbjct: 494 SDLKPHRIAKYARELAEYFNLFY---RYCPVLN----ADEEHRKARLALVDCARVVLSNV 546

Query: 574 LNIIGVESPNEM 585
           L+++G+++P EM
Sbjct: 547 LDVLGIKAPEEM 558


>gi|295837204|ref|ZP_06824137.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197698558|gb|EDY45491.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 597

 Score =  362 bits (930), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 120/586 (20%), Positives = 218/586 (37%), Gaps = 66/586 (11%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N  + L++    +P  +A+ +VA +     +  + ++G GF+N+ +    
Sbjct: 34  RRSDRADFQANGVLALAKKAKANPRELADRVVAGLPDSAVIKEIEVSGPGFLNITVPDEA 93

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + + L++   +G   G        +  I++   N    MHVGH R AV+GD +  ++ F+
Sbjct: 94  ILRNLAARSAAGERLGVPYAEHPGRTVIDYAQPNVAKQMHVGHLRSAVIGDAVMRMLEFT 153

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G  V R ++I D G Q   L   +     +   + D                   L   Y
Sbjct: 154 GETVIRRHHIGDWGTQFGMLIQYLVEHPAELDRSADPAEASQEAGEA----AMSNLDRVY 209

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +    F E++     KD +   ++ +   D + L   H        +       +    
Sbjct: 210 KASKKLFDEDEG---FKDRARHRVVDLQAGDEETLAFWHRFVDESKVYFNALFGKLD--- 263

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-------LFRSTMVGDD---VDRPLLKS 327
            ++     V E       ++T    +     +       +F   + G D   V   + KS
Sbjct: 264 MDIRDADIVGESGYNDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGRPVPLIVRKS 323

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385
           +G + Y A DL+  + + ++   D ++YV+ +  + + K +   A         +  V L
Sbjct: 324 NGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLTEDVRAVQL 383

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416
                L  DG P K   RAG+ + L  ++DE                             
Sbjct: 384 AFGTVLGADGKPFK--TRAGESVRLVDLLDEAVTRATAVVREKDVKGQLGEDEIAERGAQ 441

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V++  L    +    FD  ++   + +  V Y+QYAYAR +SI R+A        
Sbjct: 442 VGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRA-------T 493

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P      E     +E  L +HL  +   +  AT    P+KLA YLY  AS++   +
Sbjct: 494 ASGAPAPAAHTELPLAPAERALGLHLDAFGDQVLEATGEYAPHKLAAYLYQTASLYTTFY 553

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                         N  ++   RL L       + +GL ++G+ +P
Sbjct: 554 DQCHVLS-----DDNAPEVVANRLFLCELTGRTLAAGLGLLGIRAP 594


>gi|311029544|ref|ZP_07707634.1| arginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 561

 Score =  362 bits (930), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 128/606 (21%), Positives = 235/606 (38%), Gaps = 81/606 (13%)

Query: 13  NYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
             L        + +  LD+I  ++E+P+   HG LS      L++     P  +A  I  
Sbjct: 4   TALAAETLHSVIPELQLDKITQLLEKPKHAQHGDLSF-PCFELAKMKRTAPPLLAADIAT 62

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           +++ +  ++     G  ++N++     +++ +   I+     YG   +     + ++  S
Sbjct: 63  QLR-NAMIEKTEAVGP-YVNIFFRKDMIQQKVVYIILKEKENYGTIHLKNKETIVLDLSS 120

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS-VFWRYQQA 188
            N   P  +GH R  V+G+ +A+++  SG+E  R  Y+ D G Q   L  + + W  ++ 
Sbjct: 121 PNIAKPFSMGHLRSTVIGNAIANILEKSGFETVRINYLGDWGTQFGKLIAAYLKWGKEEK 180

Query: 189 LYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKII 245
           +  N        Y   + +  V  +L D+         E  E+ + + K +  ++ +K  
Sbjct: 181 IRRNPIPELLKLYVKFHEEAAVNTDLNDEGRRWFKQLEEGNEEAVSLWKWFREES-LKEF 239

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 L +  D +  E  ++      +  ++  L  Q  + E       S   Q  ++D
Sbjct: 240 NKIYALLGVTFDSYQGEAFYN----DKMDQVVQMLEEQDLLKE-------SDGAQVVELD 288

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYV 364
              L              + KSDG+  Y   DLA    + +   F   +YV+G + S + 
Sbjct: 289 DPSL----------PPCLIKKSDGATLYATRDLAAALYRKKVYQFSKALYVVGQEQSIHF 338

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
           ++++ V    +   A   +       L +DG   KMS R G  + L  V+ E        
Sbjct: 339 QQVKEVLKKANFDWAA-EMHHIPFGLLLKDGK--KMSTRKGKVVLLEEVLKEAIQLAERN 395

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            VG  +V F  L       ++F    + +   E    YVQY YA
Sbjct: 396 IESKNPDLPDKEEVARQVGVGAVIFHDLKNYRVNSVEFSLEDMLKFEGE-TGPYVQYTYA 454

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SI ++ K     +D  L            D    +L   L EYP VI N+ +A +P 
Sbjct: 455 RANSILKKGKWTGEVIDKGL-----------GDNYSWELTKLLQEYPEVIANSNMAYDPS 503

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A ++ D+   F+  + + +                  RL LV A A +I   L ++G+
Sbjct: 504 LVAKHIVDVCQAFNSWYGNVKFL--------EEDAEKGARLALVSATAIVIKESLRLLGI 555

Query: 580 ESPNEM 585
           ++P EM
Sbjct: 556 QAPQEM 561


>gi|150401525|ref|YP_001325291.1| arginyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166232800|sp|A6UW07|SYR_META3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150014228|gb|ABR56679.1| arginyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 574

 Score =  362 bits (930), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 141/614 (22%), Positives = 250/614 (40%), Gaps = 77/614 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + ++ L   ++E+   I  E      I +E P   + G  STN +  L++ L   P+ IA
Sbjct: 4   NITNILIKKIEELTETIYDE-----TIRLEEPPSISLGDYSTNISFKLAKLLKKSPMVIA 58

Query: 66  ELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E +   +  +       I A  G+IN ++  +   K   + + S  +       K  KV 
Sbjct: 59  EELTNLLISENIEGIKEIKAVNGYINFFIDYNLYSKSGIAKISSEKDKFGQGAPKNKKVI 118

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IE  SANP GP+H+GH R A+VGD+L  ++ F+GY V  +YY+ND G Q   +   +   
Sbjct: 119 IEHTSANPNGPLHIGHSRNAIVGDSLKRIVEFAGYVVEAQYYVNDMGRQEAIVVYGLDKF 178

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVKDYSV 238
                   D  + E Y+    L +   E  +      K   E     EE  L    +Y+V
Sbjct: 179 ELNEQQKPDHAIGEVYFKANQLLNENPEQEEEILKLMKKYEEASEKGEENELTNKFNYAV 238

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +   ++ L  LNI HD F+ E  + +     ++ +I  L   G V            
Sbjct: 239 NYALSGFKETLNNLNIHHDKFVWESSYVKN--GMVQKVIQTLKDTGKV------------ 284

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                   +      +  G D    L + +G+  Y   D+AY   K +   D  I ++G+
Sbjct: 285 -----EKDEVYRLDLSEFGIDKKLVLARLNGTSLYSTRDIAYHIDKMK-NCDIGINILGA 338

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH    + + A    +        V+  E + L        MS R G FI++  + +E  
Sbjct: 339 DHKLTAEMVNASLKLLGYNTP--EVVFYEFISLPEG----SMSTRRGTFISIDELYEEAK 392

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    +   +VR+ ++     + + F +    +  K    
Sbjct: 393 NRAVKEIKKRNETTEEEEINNIAHKIAVGAVRYNIVRISPDKAMVFRWDDALDFEKVG-A 451

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+ARC  I  +      + + +         E + +  E  LI  L ++P+++E 
Sbjct: 452 PVIQYAHARCCRILEK-----ENTNENKPIDATELFEYDLNEHEKLLIKILLKFPKIVEK 506

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +  A++P  +A Y  D+A  F+ ++++          +  N+ +   RL+LV    +II 
Sbjct: 507 SADAKKPQIMATYALDVAQTFNRYYANC------PIFKEENKNIVYSRLELVKCTKTIIE 560

Query: 572 SGLNIIGVESPNEM 585
           + LN++G+E P +M
Sbjct: 561 NALNLLGIECPGKM 574


>gi|255023773|ref|ZP_05295759.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 359

 Score =  362 bits (930), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 148/377 (39%), Positives = 216/377 (57%), Gaps = 20/377 (5%)

Query: 65  AELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE IV  +K D   +  V IAG GFIN YL  +YL  ++  I+    +YG +  GKG K 
Sbjct: 2   AESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKF 61

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEFVSANPTG +H+GH R A +GD+LA++M  +G++V+REYYINDAG QIN L LS   
Sbjct: 62  QIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEA 121

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           RY +AL   DS+ PE  Y G  +  +GK+LA KY  + ++  EE+   + +  ++   + 
Sbjct: 122 RYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFEIG 180

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +R DL+   +  D + SE   +  + + +   ++ L   GY+YE               
Sbjct: 181 KLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE--------------- 223

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                   R+T   DD DR L+KSDGSYTYF  D+AY   K ERGFD +I + G+DH GY
Sbjct: 224 -QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGY 282

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + R+ A   A+     Q+ V + +LV L+ DG+ +KMSKR G  +T+R +++EVG D+ R
Sbjct: 283 IPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATR 342

Query: 424 FMMLWRKNSELLDFDFC 440
           +    R +   ++FD  
Sbjct: 343 YFFAMRSSDTHMNFDMS 359


>gi|253578270|ref|ZP_04855542.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850588|gb|EES78546.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 588

 Score =  362 bits (929), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 114/629 (18%), Positives = 237/629 (37%), Gaps = 88/629 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                 ++   L     K   +       V  RP  C       N AM  ++     P  
Sbjct: 1   MKKLMEQMAEELSAAFEKSGYDPSYGKVTVSNRPDLCE---FQCNGAMAGAKAYKKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ +VA +K         +   GFINL +   +L   L  +     +   +   +   +
Sbjct: 58  IADDVVAYLKDSQVFSMAEVVKPGFINLKVKGEFLADYLKEMAAD-EKLSVSAAKEPKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 IIDYGGPNVAKPLHVGHLRSAIIGESIKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKH 176

Query: 184 RYQQALYNNDS---DLPEGY----------YP---GVYLKHVGKELADKYSSELLNFPEE 227
           R  + +Y +DS   + PE            YP   G   +          ++ LL   + 
Sbjct: 177 RKPELVYFDDSYTGEYPEEAPFTISELEEIYPCASGKSKEDEAYRNEALEATHLLQQGKP 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            ++ +  ++ +   +  ++ +   LN+  D++  E D     P     +++ +  +G+ Y
Sbjct: 237 GYMALW-NHIMNVSVTDLKRNYDKLNVSFDLWKKESDAQPYIPG----MVEEMKEKGFAY 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
                           +D+  L+       D  + P   LLKSDG+  Y   DLA    +
Sbjct: 292 ----------------VDQGALVVDVKEENDTKEIPPCMLLKSDGASLYTTTDLATIVER 335

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSK 402
            +    D ++YV+      +  ++   A      K    +  L       +DG P K   
Sbjct: 336 MKLFDPDEILYVVDKRQELHFIQVFRCARKTGLVKDDTKLSFLGFGTMNGKDGKPFK--T 393

Query: 403 RAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLD 436
           R G  + L  ++                          + VG  ++++  L  + ++   
Sbjct: 394 REGGVMRLETLIKDINEEMFTKIVENRSVKDKDAKETAEIVGLSAIKYGDLSNQATKDYI 453

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +     + N   Y+ Y   R +SI  +  +   +L+       V       + S+ 
Sbjct: 454 FDIDRFTSF-EGNTGPYILYTIVRIKSILNRFAEEGGNLEAGTILDPV-------NDSQK 505

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ L  +   +ENA   + P+K+  Y+Y++++ F+  +         + +   N    
Sbjct: 506 NLMLQLTGFGATVENAFEEKAPHKICAYIYEVSNAFNSFYH------ETKILSEENEAQK 559

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +QL+     ++ + ++++G  +P+ M
Sbjct: 560 ASFIQLLKLTKKVLETCIDLLGFSAPDRM 588


>gi|224064484|ref|XP_002301499.1| predicted protein [Populus trichocarpa]
 gi|222843225|gb|EEE80772.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  362 bits (929), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 131/622 (21%), Positives = 231/622 (37%), Gaps = 95/622 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIER---PRDCAHGHLSTNAAMIL-SRPLGLD------ 60
           LK  L ++  ++ +E  +     IE          G    N AM L S+  G        
Sbjct: 11  LKQKLAKLF-QLSLEATVPGEPDIEPLVAACTAKFGDYQCNNAMGLWSKIKGRPGIEFRG 69

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + I+  +     ++S  +AG GF+N+ LS +++ K +  ++V GIE     +   
Sbjct: 70  PPAVGQAIMKNLPQSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL-SI 128

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  ++F S N    MHVGH R  ++GDTLAS++ FS  EV R  ++ D G Q   L   
Sbjct: 129 KRAVVDFSSPNIAKEMHVGHLRSTIIGDTLASMLEFSNVEVLRRNHVGDWGTQFGMLIEF 188

Query: 181 VFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKD 235
           +F ++      N+    DL   Y        V  E  D+    ++     E+ +      
Sbjct: 189 LFEKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKDRAQKAVVRLQSGEQMYRKAWAQ 248

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               +  +      + L +  +    E  ++   P     +I+ L  QG V E       
Sbjct: 249 ICEIS-RREFDQVYQRLGVHLEEK-GESFYNPYIPG----VIEALTNQGLVEES------ 296

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                       +++F   + G ++   ++KSDG Y Y + D+     +  E   + +IY
Sbjct: 297 ---------KGARVIF---IEGINIPLIVVKSDGGYNYASTDMTALWYRLTEEKAEWIIY 344

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMSKRAGDFIT 409
           V       +       A       A          +   + L  DG   +   R+ + + 
Sbjct: 345 VTDVGQQQHFDMFFKAAKRAGWLPADDRQYPKASHVGFGLVLGEDGK--RFRTRSTEVVR 402

Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                             VG  +V++  L         FDF 
Sbjct: 403 LADLLDEAKTRSKAALIERGKAAEWTEEELEQTAEAVGYGAVKYADLKNNRLTNYTFDFD 462

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++    K N   Y+ YA+AR  SI R++         D        +       E  L +
Sbjct: 463 QMLN-DKGNTAVYLLYAHARICSIIRKSG-------KDTGELKKTGKIVLDHADERALGL 514

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL ++  V+E A     P  L  YLY+L+  +   +S+ +       V  +  +    RL
Sbjct: 515 HLLQFAEVVEEACTNLLPNVLCEYLYNLSENYTRFYSNCQ-------VVGSAEE--TSRL 565

Query: 561 QLVHAVASIINSGLNIIGVESP 582
            L  A A ++     ++G++  
Sbjct: 566 LLCEATAVVMRKCFFLLGIKPV 587


>gi|195175085|ref|XP_002028293.1| GL14083 [Drosophila persimilis]
 gi|194117430|gb|EDW39473.1| GL14083 [Drosophila persimilis]
          Length = 664

 Score =  362 bits (929), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 115/586 (19%), Positives = 226/586 (38%), Gaps = 75/586 (12%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
             +G    N AM L++ +        P  IA  +     + P ++ + + G GF+N+YLS
Sbjct: 112 AKYGDYQCNNAMGLAKKMKEMGVNRTPRDIANELQKCCPLSPIINKLEVGGAGFVNVYLS 171

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y  + L +I+ +GI+  R L     +V ++F S N    MHVGH R  ++G+++  L+
Sbjct: 172 KDYAAQSLKNILRNGIKPPRVL---KRRVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLL 228

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKE 212
            F  ++V R  ++ D G Q   L   +  R+   L  +    DL   Y          +E
Sbjct: 229 EFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFLNKSPPIGDLQSFYKESKKRFDTEEE 288

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +  + +++    +        + Q +  + R + +A+  + D+ + E    F++   
Sbjct: 289 FKKRAYNRVVSLQSGEPNS---RKAWQLICDVSRQEFQAIYDRLDVTLRERGESFYQ--- 342

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  ++D L  +  +                D  R+ +       G  +   ++KSDG 
Sbjct: 343 SRMLSVVDFLRNKNMLEH--------------DEGRQIMWPNEDRSG--IPLTIVKSDGG 386

Query: 331 YTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCE 387
           +TY  +D+A  + + E      +IYV+ S  S +   +   A    +    A     +  
Sbjct: 387 FTYDTSDMAAIRHRIEEEHCTWIIYVVDSGQSTHFNTIFKAAERCCILNPTAHRVHHVQF 446

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            V L  DG   K   R+GD + L  +++E                             V 
Sbjct: 447 GVVLGEDGK--KFKTRSGDTVKLSDLLNEGMKRSLEQLRSRGRDEILTAQELFEAQEAVA 504

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              +++  L         F F K+ +  + N   Y+ Y Y R  SI R   D F  L   
Sbjct: 505 YGCIKYSDLCHNRISDYVFSFDKMLD-DRGNTAVYLLYTYTRICSIARNLGDDFCYLLKV 563

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L    ++         E +L   L +   ++   +     + L  + Y++ +VF   +  
Sbjct: 564 LDTVEIV----LNHEKEWKLAKTLLKMHDIMIKCSKDLFLHFLCEFCYEVCTVFTEFYDS 619

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                + +       ++   R+ +  A A+++     I+G++  ++
Sbjct: 620 CYCIKKNK--DGEIIEVNRSRVLMCEATAAVLRQCFYILGLKPVSK 663


>gi|328698412|ref|XP_001947348.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
           pisum]
          Length = 592

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 125/626 (19%), Positives = 244/626 (38%), Gaps = 88/626 (14%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
            L +   S   N +K     ++   K                    NA+M + + L    
Sbjct: 13  NLHSILISLFSNAIKTAYPALEDFGKPA------VSAGSKFADYQCNASMQICKLLKAKG 66

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             + P  +A+ +V  +     ++ V ++G+GFIN++LS + LR IL  ++ + ++     
Sbjct: 67  ENVSPNVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDILQYVLENKLK--PKP 124

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +    K+ ++F + N    MHVGH R  ++G++L+ +  F G++V R  +I D G Q   
Sbjct: 125 LTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVLRINHIGDWGTQFGM 184

Query: 177 LALSVFWRYQQALYNNDS--DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +  ++      +    DL + Y     L     E   +    ++     + +    
Sbjct: 185 LIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLEFKKRAYDCVVKL---QSMSPDH 241

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             + + +  + R + + +  + +I I E    F++   S +  ++ +L  +G++      
Sbjct: 242 VQAWKLICDVSRKEFQKIYERLNISIIERGESFYQ---SRMETVVKDLEDKGFL------ 292

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                     + D  + +  S      +   ++KSDG +TY  +D+A  K +  E   D 
Sbjct: 293 ----------ENDDGRKIMWSPESS--IPLTVVKSDGGFTYDTSDIATLKQRIEEEKADW 340

Query: 352 MIYVMGSDHSGYV---KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +IYV+ +  S +    K+    +  +   K +++ +    V L  D    K   R+GD +
Sbjct: 341 IIYVVDAGQSLHFETLKKCAIHSGFLDPSKVRMDFV-GFGVVLGEDKK--KFKTRSGDTV 397

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L  ++DE                             +    +++  L    +    F F
Sbjct: 398 RLASLLDEGIKRTRDKLVEKGRDKVLTDEELKLAETALAYGCIKYADLCHNRNHDYVFSF 457

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            K+ +  K N   Y+ YA  R RSI         DL+  +         S     E +L 
Sbjct: 458 DKMLD-DKGNTAVYLLYALTRIRSIINNLGTYTQDLNESI---------SLDHDKEWKLA 507

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L  +P VI   T     + L  YLYD+A+ F   + +     +         K+   R
Sbjct: 508 KTLLRFPEVISKITDDFCLHHLCEYLYDVATTFSEFYDNCYCIEKNPQ-TGEIVKVFTGR 566

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L    A  + +GLN++G+ + + M
Sbjct: 567 ILLCKVTAEYMETGLNLLGISTVSRM 592


>gi|302854025|ref|XP_002958524.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f.
           nagariensis]
 gi|300256171|gb|EFJ40444.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f.
           nagariensis]
          Length = 656

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 135/642 (21%), Positives = 222/642 (34%), Gaps = 127/642 (19%)

Query: 39  DCAHGHLSTNAAMILSRPLG------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +  +G    N AM L   L         P  +A  IV  +  +  +    +AG GFIN+ 
Sbjct: 41  NAKNGDYQCNNAMALFGKLKGTPSAPKAPRDVATAIVGALPANGLIAETSLAGPGFINIR 100

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS   L   LS ++V G+         G KV I+F S N    MHVGH R  ++GDTL  
Sbjct: 101 LSRDSLSTRLSEMLVKGLASWAPTGYIGKKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCR 160

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFW--RYQQALYNNDSDLPEGYYPGVYLKHVG 210
           +  + G +V R  ++ D G Q   L   +    R + A    D D+ E            
Sbjct: 161 IFEYCGADVLRLNHVGDWGTQFGMLIEHMADARRLRVAAGGEDKDMDED----------V 210

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +L + Y +    F EE+        +V  +     + L +          E +      
Sbjct: 211 ADLQELYRAAKKRFDEEEEFKTRAREAVTRLQSGDPESLASWQRICAASRREFE---AIY 267

Query: 271 SPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           S +   +       Y  + + ++   K+      D     +       G  V   + KSD
Sbjct: 268 SRLGVTLQERGESFYNPMLKDVVEELKAAGVATIDNGAACVFVE----GQSVPLIVQKSD 323

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE---KKAQINVL 384
           G + Y + D+A  K +  E   D +IYV     S + + + A A                
Sbjct: 324 GGFGYASTDMAAIKHRLNEEKADWIIYVTDVGQSQHFELVFAAAKKAGWLVDGSGPKVSH 383

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
           +   + L  DG   +   R+GD + L  ++DE                            
Sbjct: 384 VGFGLVLGEDGK--RFRTRSGDLVRLVELLDEAKSRCAATIRERRAEAGEEVNEAEVEDA 441

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              +G  +V++  L    +    F F ++    K N   Y+ YA+AR   I R+A     
Sbjct: 442 ACAMGYGAVKYADLKNHRTTNYKFSFDEMLNL-KGNTAVYLLYAHARIAGIVRKADKDVY 500

Query: 474 DLDFDL-----FPRNVIPQESEFDTS--------------ELQLIVHLAEYPRVIENATI 514
            L  D       P+++ P  S F  S              EL+L +HL + P  +E+A  
Sbjct: 501 ALAADTPISLDHPKHLYPSPSLFWPSHATVTATYFSPRLQELELALHLCKLPEALEDAIE 560

Query: 515 AQEPYK----------------------------------LAFYLYDLASVFHGHWSHGR 540
              P +                                  +  YLYDL+  F+  +   +
Sbjct: 561 ELAPNRRVDVAFRNLVPTGFTLNALDLPLRATHYRSIKLRVTDYLYDLSEKFNSFYVDCK 620

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                  V  + ++    RL L  A A ++     ++G+   
Sbjct: 621 -------VLGSEQE--ASRLLLCEATAVVMRKCFELLGIRPL 653


>gi|227524707|ref|ZP_03954756.1| arginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088191|gb|EEI23503.1| arginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 568

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 134/608 (22%), Positives = 259/608 (42%), Gaps = 74/608 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ +++ N +  +        ++ +++   +P+  + G L+   A  L++     P  IA
Sbjct: 7   DYKAQVTNSILSVLNDELSSAEVYEKLA--QPKSLSMGDLAF-PAFSLAKVFHKAPNQIA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +V++I      + V   G  +IN +L    +  ++L++I+  G  YG+N  GKG  V 
Sbjct: 64  ADLVSKIDQ-TSYEKVEAKGA-YINFFLDKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVP 121

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           I+  S N   P+ +GH R  V+G+++A L+  +GY   ++ ++ D G Q   L ++   W
Sbjct: 122 IDMSSPNIAKPISMGHLRSTVIGNSIAKLLVKNGYHPIKDNHLGDWGTQFGKLIVAYKKW 181

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPE--EKWLPIVKDYSVQA 240
             +  +  +  +    YY   + +     EL D+         +  E+   + K +   +
Sbjct: 182 GNEDDVKRDPINNLVKYYVKFHKEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVS 241

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++        L +  D F  E  ++      + + I  L  +G + E       S+  Q
Sbjct: 242 -LESFNKIYDKLGVTFDTFNGEAFYN----DKMDEGIQILKDKGLLVE-------SQGAQ 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
              +D+ +L              +LKSDG+  Y   D+A    +         +YV+GS+
Sbjct: 290 VVKLDKYKL----------NPALILKSDGATLYITRDIATAIYRDRTYKPAMNLYVVGSE 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMP 397
            + Y K+L+AV   +  + A+                          L E++    +   
Sbjct: 340 QTYYFKQLKAVLLEMGLQSAENLHHIPFGLITVNGKKLSTRSGRIILLDEVLDDAINLAK 399

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            ++  +  D      V  EVG  ++ F  L  + +  +DF      +   E    YVQY+
Sbjct: 400 KQIEAKNPDLEDKDEVAKEVGVGAIIFGDLKNERTNNIDFVLEDQLKFEGE-TGPYVQYS 458

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI ++A      +DF    + +       D +  + +  L E+P V+E+A    E
Sbjct: 459 HARAESILKKA----SSIDFHTTDKEL------DDPAAWETVTALNEFPHVVESACKDFE 508

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P ++A Y   LA  F+ +++H +       V   + KL   RL LV +V+ ++   LN++
Sbjct: 509 PSEVAKYSLKLAKAFNKYYAHSK-------VLVEDDKL-GARLALVKSVSIVLKESLNLL 560

Query: 578 GVESPNEM 585
           GV++P+ M
Sbjct: 561 GVKAPDAM 568


>gi|330467703|ref|YP_004405446.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328810674|gb|AEB44846.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 573

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 122/617 (19%), Positives = 219/617 (35%), Gaps = 93/617 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S L + +      + +   +       + R   H     +  +  +R L   P  IA 
Sbjct: 6   LASSLSDTVSAAATSLGLADFVA------QVRRSEHADFQADGVLAAARTLRRRPRDIAA 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  ++ D  V    +AG GF+NL L+   L   L+  +      G      G    ++
Sbjct: 60  EVVEALRADDLV--AEVAGPGFVNLDLADRTLLTQLAGRLAD-PRLGVGTPETGITTVVD 116

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N    MHVGH R  ++GD L  ++   G  V R  +I D G Q   L     ++ +
Sbjct: 117 YSQPNIAKEMHVGHLRSTIIGDALVRILEHLGGTVVRRNHIGDWGTQFGMLI---QYQNE 173

Query: 187 QALYNNDSD-----LPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQ 239
           Q +     D     L   Y           + A +    ++     +   +   +D   +
Sbjct: 174 QPVTVGGDDASMSRLAALYRQARARFDTDPQFAVRARQRVVALQGGDPNTVAAWQDIVAE 233

Query: 240 AMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  +   D    L ++      + E  ++   P                         + 
Sbjct: 234 ST-RYFTDVYARLGVRLTPADAVGESAYNDALPGV-------------------AADLAA 273

Query: 298 TTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMI 353
                  D    +F   + G D       + K DG + Y A DLA  + +  E   D ++
Sbjct: 274 QAVAVPSDGALCVFFDEVRGPDGAPSPLIVRKRDGGFGYAATDLAALRQRVAELHADRLL 333

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+ +  S +   +   A        Q++ V +     L  DG P K   RAGD + L  
Sbjct: 334 YVVDARQSLHFTMVFDTARRAGWLPPQVSAVHVAFGTVLGPDGRPFK--TRAGDTVRLVD 391

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++ E                           VG  +V++  L    +    +D  ++   
Sbjct: 392 LLTEAVDRAREVVAAKNPELTGAALHERARQVGIGAVKYADLATSRTRDHTYDPQRMLAL 451

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           +  N   Y+QYA+AR RS+  +A D    +D               + +E  LI+ L  +
Sbjct: 452 T-GNTGVYLQYAHARIRSLLARAGDPAITVDPTTT----------LEPAERALILDLDGF 500

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +       EP++L  YLY LA  F   + H         ++A +  +   RL L H 
Sbjct: 501 ADTLTEVLAHYEPHRLCGYLYRLAQTFTTFYEHC------PVLRAPDP-VRSNRLALCHL 553

Query: 566 VASIINSGLNIIGVESP 582
               +++GL+++G+ +P
Sbjct: 554 TGDTLHTGLSLLGIPAP 570


>gi|290890974|ref|ZP_06554038.1| hypothetical protein AWRIB429_1428 [Oenococcus oeni AWRIB429]
 gi|290479373|gb|EFD88033.1| hypothetical protein AWRIB429_1428 [Oenococcus oeni AWRIB429]
          Length = 572

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 128/610 (20%), Positives = 248/610 (40%), Gaps = 78/610 (12%)

Query: 12  KNYLKEIDCKIKVEKKILD-----RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +  + E+   IK     L      + ++E+P+   +G  +      LS+   L P  +A 
Sbjct: 5   EKIVDELSIAIKESGYDLPMNFNLKKLVEKPKMLKNGDYAFPV-FGLSKIFHLSPDQVAF 63

Query: 67  LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I  R+ K D + + +   G  +IN +L        L S +++   YG+N  G    + +
Sbjct: 64  SIYNRLNKSDTNFEKIEHNGA-YINFFLDRKREASTLISDIINNDSYGKNNAGNKKTIIV 122

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           E  S N   PM +GH R  ++G++L+ +   +GY+  +  ++ D G Q   +  +   W 
Sbjct: 123 ELSSPNIAKPMSMGHLRSTMIGESLSRIANENGYKTIKINHLGDWGTQFGLMIEAYKLWG 182

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAM 241
            +  +  N  D     Y  +  +        +         E+   +   + K +   ++
Sbjct: 183 NKDIIEQNPVDELVKLYVRINKEAETNPELSEAGRSWFKKLEDGDPEARELWKWFKNVSL 242

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  +   + L +  D    E  +       +  IID L  +G + E       S+  Q 
Sbjct: 243 REFNKV-YQRLGVTFDSMNGESFYQ----DKMSVIIDLLKNKGILTE-------SRGAQI 290

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+      +   +        +L+SDG+  Y   DLA    +     FD  +YV+G++ 
Sbjct: 291 VDLPSLLPAYNLPVS------IILRSDGATQYATRDLATAFYRQTTYHFDKCLYVVGAEQ 344

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415
             Y K+++A+        +  ++       +  +G   KMS R G+ + L  V+D     
Sbjct: 345 KEYFKQIKAILKLAGFNWSD-DMEHIYFGLITFNGK--KMSTRKGNVVKLEQVLDSAHKL 401

Query: 416 --------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                               +VG+ +V F  L    +  +DFD  ++ +  + +   YVQ
Sbjct: 402 AKNQIAEKNPNLSNSDKVAEQVGTGAVIFNDLMNDRTLSIDFDLDQIVKF-EGDTGPYVQ 460

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y + R  SI R+               ++       D     ++  L+ YP +++ A I 
Sbjct: 461 YTHVRAVSILRK----------SSIKIDINDAIKLLDNDSWAVVSKLSVYPDIVKRAWIL 510

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           +EP  +A YL +LA  F+ ++S          +   +++L+  RL LV AVA ++  GL 
Sbjct: 511 REPSIIAKYLLNLAHEFNSYYSKVH-------ILVEDKQLS-SRLALVDAVAIVLKKGLE 562

Query: 576 IIGVESPNEM 585
           ++ V++P++M
Sbjct: 563 LLDVQAPDQM 572


>gi|154484785|ref|ZP_02027233.1| hypothetical protein EUBVEN_02503 [Eubacterium ventriosum ATCC
           27560]
 gi|149734633|gb|EDM50550.1| hypothetical protein EUBVEN_02503 [Eubacterium ventriosum ATCC
           27560]
          Length = 588

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 125/623 (20%), Positives = 246/623 (39%), Gaps = 76/623 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +    ++   + + +KK+   +V  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKLLELITEEFEKAFEQNEYDKKLGKVVVSNRPDLCQ---YQCNGAMAGAKLYHKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V  ++ +   +SV     GFIN+ L+  ++ K L+ +  +      N       +
Sbjct: 58  IANQVVESLQDNEMFESVEAVMPGFINIKLNSEFVAKYLNDMKEADKYGCENKA--PETI 115

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++  AN   P+HVGH R AV+G+++  +  F G +V  + ++ D G Q+  +   +  
Sbjct: 116 VIDYGGANVAKPLHVGHLRSAVIGESVKRIERFMGNKVISDVHLGDWGLQMGLIITELEC 175

Query: 184 RYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--- 237
           R    +Y ++S   + PE     +         A   S     F E+     +K  S   
Sbjct: 176 RKPDLVYFDESYTGEYPEEAPFTISELEEIYPCASAKSKVDEEFKEKAHQATLKLQSGYA 235

Query: 238 -----VQAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                 + +MK+  +DLK     LN+  D++  E D     P  I+D+ID    +   YE
Sbjct: 236 PYTAIWKHIMKVSVEDLKKNYGNLNVDFDLWKGESDAQPYIPGLIQDLID----KKLAYE 291

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ER 347
                  S+     D+       +     +     + KSDG+  Y  +DLA    +  + 
Sbjct: 292 -------SQGALVVDIS------KEDDTKELPPCIVRKSDGAALYATSDLATIIQREQDY 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIK------- 399
             ++ IYV       +  ++  V+   +       +  L       +DG P K       
Sbjct: 339 KPNHYIYVADKRQELHFTQVFRVSKKANIVDENTKMEFLGFGTMNGKDGKPFKTRDGGVM 398

Query: 400 -----------------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
                            M  R        +    VG  ++++  L  + S+   FD  + 
Sbjct: 399 RLENLIAQINKAVYDKIMENRTVSEEEANNTAKIVGLAALKYGDLSNQASKDYIFDIDRF 458

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+ Y   R +SI  + K    + D +L      P  +  + S++QL++ +
Sbjct: 459 ASF-EGNTGPYILYTIVRIKSILEKYKAESGNADVNL------PVINTDNGSQMQLMLEV 511

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++  +IENA     P+K+  Y+YDL++ F+  +         + +   ++      + L
Sbjct: 512 AKFNEIIENAAEELAPHKICSYVYDLSNAFNRFYH------ETKILAEEDQTKKAGYIAL 565

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           ++   +++   ++++G  +P+ M
Sbjct: 566 INLTINVLEQCIDLLGFSAPDRM 588


>gi|313157972|gb|EFR57378.1| arginine--tRNA ligase [Alistipes sp. HGB5]
          Length = 593

 Score =  361 bits (928), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 132/641 (20%), Positives = 237/641 (36%), Gaps = 104/641 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S  ++  ++ +   +  E     ++ I++ R    G   T     L R     
Sbjct: 1   MNIENFISDAVRRSVEALYGPLDGE-----QLQIQKTRREFEGDY-TLVTFPLLRRSRKS 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A  I   +  +      F   KGF+NL L  ++     + I              G
Sbjct: 55  PEATATEIGEYMTANVPEVKSFNVIKGFLNLTLDCAFWAARFAEIAADANFGQAPDT--G 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G ++A ++  +G+ V +   +ND G  I    L+
Sbjct: 113 RTVMIEYSSPNTNKPLHLGHIRNNLLGYSVAQILRANGHNVIKANLVNDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----------------ELADKYSSELLNF 224
            +  Y        S +   +  G Y     K                E A K +  +L  
Sbjct: 173 -WKLYGNGETPASSGMKGDHLVGKYYVEFDKHYKAQIKELTAQGQTEEEAKKNAPVMLEA 231

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E       KD  V ++ + +            KAL +  D    E   +    S    +
Sbjct: 232 QEMLRKWEAKDPEVYSLWETMNGWVYEGFDVTYKALGVDFDKIYYESQTYLLGKS----L 287

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++   R+G  Y                 D   +    T  G D ++ LL+ DG+  Y   
Sbjct: 288 VEEGLRKGVFYR---------------RDDNSVWIDLTADGLD-EKLLLRGDGTSVYMTQ 331

Query: 337 DLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYR 393
           DL     ++E    D+MIYV+G++ + + + L+ +   +        I  L   +V L  
Sbjct: 332 DLGTAYRRFEENRLDDMIYVVGNEQNYHFQVLKLILKKLGYADWSDHITHLSYGMVELPE 391

Query: 394 DGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRF 424
                KM  R G  +    ++ +                             VG  ++++
Sbjct: 392 G----KMKSREGTVVDADDLIADMVSTAREMSDELGKLDGCTEEEADAVSTMVGLGALKY 447

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + FD  +  +    N   ++QY +AR  S+ R+A +   D          
Sbjct: 448 FILKVDPKKTMLFDPRESIDF-NGNTGPFIQYTHARICSVLRKAAEAGIDFSGA------ 500

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              ++++   E+ L+  L EYP V+  A     P  +  Y+Y+LA  F+G++        
Sbjct: 501 --AQADYLPEEIALVKSLTEYPSVVAAAGENFAPSIVGAYVYELAKQFNGYYHDH----- 553

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++  N +   MRLQL   VA +I SG+ ++G++ P  M
Sbjct: 554 -SILKEENDETRRMRLQLAQQVARVIRSGMKLLGIDVPERM 593


>gi|289761447|ref|ZP_06520825.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|289708953|gb|EFD72969.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 344

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 122/368 (33%), Positives = 181/368 (49%), Gaps = 28/368 (7%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           + + L+ P+ +     +   V  M   I+  L       D++  ED  H G    + + I
Sbjct: 5   APDALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAI 62

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L   G +YE                       R++  GDD DR ++KSDG   Y A D
Sbjct: 63  ARLRETGNIYE----------------KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGD 106

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           LAY+  K +RGFD  IY++G+DH GY+ RL+A AAA  +  A + VL+ ++V L RDG P
Sbjct: 107 LAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQP 166

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           ++MSKRAG  +TL  +V+ +G D+ R+ ++       +D D       S ENPV+YVQYA
Sbjct: 167 VRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYA 226

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  ++ R A ++    D +         E      E  L+  L E+PRV+E A   +E
Sbjct: 227 HARLSALARNAAELALIPDTNHL-------ELLNHDKEGTLLRTLGEFPRVLETAASLRE 279

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+++  YL DLA  +H  +   R  P+          L   RL L  A   +I +GL II
Sbjct: 280 PHRVCRYLEDLAGDYHRFYDSCRVLPQG---DEQPTDLHTARLALCQATRQVIANGLAII 336

Query: 578 GVESPNEM 585
           GV +P  M
Sbjct: 337 GVTAPERM 344


>gi|52549705|gb|AAU83554.1| arginyl-tRNA synthetase [uncultured archaeon GZfos31B6]
          Length = 559

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 151/614 (24%), Positives = 263/614 (42%), Gaps = 86/614 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F S +++ LK+       +   +D + IE   + A+  L+++ +  L+      P 
Sbjct: 1   MFLKFKSEVESVLKKALDASGYQ---IDDLHIE---ESAYSDLASSLSFRLASEYRQSPA 54

Query: 63  TIAELIVA--RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IA++I     I  D  V  V   G  +IN ++S  +L   +  I      YG       
Sbjct: 55  AIADVIADVIAIPKDSLVGEVQAVGA-YINFFVSKKFLEDTMHEIFEKKERYG--TGNGK 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV IE  SANP GP+HVGH R +++GDTLA ++  +GY+V  +YY+ND G Q+  +A +
Sbjct: 112 GKVIIEHTSANPNGPLHVGHIRNSIIGDTLARILKTAGYDVEIQYYVNDMGRQVAIVAWA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SV 238
           +           D  + + Y           +L  +   EL+   E     +++ +  + 
Sbjct: 172 MDRFEFDGQKKADHAIADVYIRANQELGEDPDLVRQI-DELMQRIEHGDAEMIERFSSAT 230

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  I   LK +N+ HD+F+ E  F +G    + D++  L   G              
Sbjct: 231 DLAVSGITSTLKRMNVHHDLFVHESMFVKG--GEVSDLVRELKELGLT------------ 276

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               ++    L+        D D  +L+SD +  Y   DLAY + K E+  D MI V+G+
Sbjct: 277 ----EIADGALMVPMPTF--DKDLVILRSDQTSVYVTRDLAYHRWKAEQ-CDRMIDVLGA 329

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--- 415
           DH     +L  V +A   K+    +++ E V L        MS RAG FI+   ++D   
Sbjct: 330 DHKLISSQLCYVLSACGVKEP--EIVIFEFVSLPEG----SMSTRAGKFISADELLDEVE 383

Query: 416 ------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   EVG  +VR+ ++     +   FD+    +  K    
Sbjct: 384 KQALTEVTKRRPDAEEDFRDHVAKEVGIGAVRYDIVKVSPEKATTFDWESALDFDKLG-A 442

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++QY++AR  SI ++A+ I   +D  +            + +E+  +  LA +  VI+ 
Sbjct: 443 PFIQYSHARACSILKKAQHIPESIDPAMLS----------EDAEISFVKELARFSYVIDL 492

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A+   +P+ +A Y  +LA  F+  +       RL  V +    +   R+ LV     ++ 
Sbjct: 493 ASRELKPHIVAIYARELAEAFNQFY-------RLSPVLSAPDDVRDARIGLVECARIVLA 545

Query: 572 SGLNIIGVESPNEM 585
           S L ++G+ +P  M
Sbjct: 546 STLGVLGIAAPESM 559


>gi|325849255|ref|ZP_08170691.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480199|gb|EGC83267.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 568

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 137/615 (22%), Positives = 245/615 (39%), Gaps = 80/615 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D    +   L+E +  +  ++      +IE P     G  S     IL++ L  +P  
Sbjct: 1   MEDLKGLIAKKLEEKELGLDFQEIYD---LIEIPPQDDMGDFSF-PCFILAKKLRKNPAI 56

Query: 64  IAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGT 121
           IA+ +   + K D    S   +   ++N Y+   YL+ ++L  I+     YGR+ +GKG 
Sbjct: 57  IAKELKEDLEKEDSPYFSKVDSLNAYLNFYIDRKYLQGQVLREIIKEKENYGRSDMGKGK 116

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + ++F S N   P H+GH R  V+GD + ++  F GY      YI D G Q   +  + 
Sbjct: 117 NIVLDFSSVNIAKPFHIGHIRSTVIGDAIRNIHDFLGYNTIASNYIGDYGTQFGIMIAAY 176

Query: 182 -FWRYQQALYNNDSDLPEGYY-----PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             W     L  N        Y          + +  E  D++    L   EE+ + +   
Sbjct: 177 KLWGDDDKLNQNPIKELLNLYVRYNEQASSDQDMMNEARDEFRR--LEEGEEEAVRLWSW 234

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   +  +  R   K L+I  D +  E          I D++D L  +  + E       
Sbjct: 235 FKEISFKEFDRV-YKLLDINFDNYHGE----AYQSKYIPDVLDQLKEKNLLTE------- 282

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
           S   Q  D+ +  L              ++KS+GS  Y   D+A    + +   F   +Y
Sbjct: 283 SDGAQIIDLSKYDL----------PPAIIIKSNGSSAYITRDIATAINRKKTYDFSENLY 332

Query: 355 VMGSDHSGYVKRLEAVAAAVSEK-----------------------KAQINVLLCELVRL 391
           V+ +  + + ++L A+   +                          K Q+ V L +++  
Sbjct: 333 VVATQQNLHFQQLWAILELMGYDFYKDCKHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNK 391

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             D     M  R      L      VG  +V+F  L+    +   FD+  +     E   
Sbjct: 392 AIDKTKEIMKDRDSALENLDETAQIVGIGAVKFQELYNNRIKDYVFDWDNLLNFEGE-TG 450

Query: 452 FYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            YVQY+YAR +S+ ++ + D F  ++FDL   +           E  LI  LAE+   I 
Sbjct: 451 PYVQYSYARAKSVLKKGQIDNFDKVEFDLLNTD----------EEFNLIKSLAEFKESIV 500

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP  ++  + D+A  F+  ++  +       +  ++ KL   RL L +A + +I
Sbjct: 501 RAKEKYEPSIISRKVMDIAKNFNKFYNTSK-------IMVDDEKLKEQRLALAYATSIVI 553

Query: 571 NSGLNIIGVESPNEM 585
            +GL ++G+++ ++M
Sbjct: 554 KNGLKLLGIKTVDQM 568


>gi|291538731|emb|CBL11842.1| arginyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 640

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 113/634 (17%), Positives = 230/634 (36%), Gaps = 91/634 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   + +       + K     +  RP  C       N AM  ++     P  
Sbjct: 46  MKKILDLITAEITQAFVDCGYDAKYGKVTLSNRPDLCE---YQCNGAMAAAKEYKKAPFM 102

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ + A++              GF+NL L  ++L   ++ +      +G         +
Sbjct: 103 IADEVAAKLAETSMFSMAESVKPGFLNLKLDETFLASYVADMQADEGRFGCEKAENPKTI 162

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 163 MIDYGGPNVAKPLHVGHLRSAIIGESIKRIGKFVGHKVIGDVHLGDWGLQMGLIITELKL 222

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  + +Y +++   EG YP      +  EL + Y +      E++        +   +  
Sbjct: 223 RQPELVYFDEN--FEGEYPKEAPFTI-SELEEIYPTASKKSKEDEAYKEAAMQATYELQN 279

Query: 244 I------------------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                              ++ + + LN+  +++  E D        I  ++  +   G+
Sbjct: 280 GRKGYQALLSHILNVSVTDLKKNYENLNVSFELWKGESDAQPY----IPAMVQKMKDDGF 335

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
            Y        S      D+         T   +     +LKSDG+  Y   DLA    + 
Sbjct: 336 AY-------VSDGALVVDVKE------DTDTKEIPPCMILKSDGASLYNTTDLATIVWRE 382

Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKR 403
           E    D +IYV+      +  ++   A      K +  +  L       +DG P K   R
Sbjct: 383 EDYDPDEIIYVVDKRQELHFVQVFRCARKTGLVKPETELKFLGFGTMNGKDGKPFK--TR 440

Query: 404 AGDFITLRHVVDE--------------------------------VGSDSVRFMMLWRKN 431
            G  + L ++V E                                V   ++++  L  + 
Sbjct: 441 DGGVMRLEYLVSEIDNEMLKKITENQKSKENLGISEEEAKETAKTVALAAIKYGDLSNQA 500

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           S+   FD  +     + N   Y+ Y   R +SI  +  D+    +  +         S  
Sbjct: 501 SKDYIFDIDRFTSF-EGNTGPYILYTIVRIKSILHKYHDLGKSAEGAVIT-------SVH 552

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             SE  L++ ++++  VI+ A     P+K+  Y+YDLA+ F+  +         + +   
Sbjct: 553 SESEKNLMLEISKFNAVIDGAFADTAPHKICSYIYDLANAFNSFYH------ETKIMSEE 606

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +    ++L+    S++ + +N++G  +P  M
Sbjct: 607 DETVQKSYIRLLELTKSVLETSINLLGFSAPERM 640


>gi|328698469|ref|XP_001949420.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
           pisum]
          Length = 592

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/588 (20%), Positives = 235/588 (39%), Gaps = 82/588 (13%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
                   NA+M + + L      + P  +A+ +V  +     ++ V ++G+GFIN++LS
Sbjct: 45  SKFADYQCNASMQICKLLKAKGENVSPNVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLS 104

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            + LR IL  ++ + ++     +    K+ ++F + N    MHVGH R  ++G++L+ + 
Sbjct: 105 RNKLRDILQYVLENKLK--PKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVF 162

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGVYLKHVGKE 212
            F G++V R  +I D G Q   L   +  ++      +    DL + Y     L     E
Sbjct: 163 EFIGHDVLRINHIGDWGTQFGMLIALLQDKFPNYKTESPPIKDLQQFYKQSKVLFDSDLE 222

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDP 270
              +    ++     + +      + + +  + R + + +  + +I I E    F++   
Sbjct: 223 FKKRAYDCVVKL---QSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIERGESFYQ--- 276

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           S +  ++ +L  +G++                + D  + +  S      +   ++KSDG 
Sbjct: 277 SRMETVVKDLEEKGFL----------------ENDDGRKIMWSPESS--IPLTVVKSDGG 318

Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV---KRLEAVAAAVSEKKAQINVLLC 386
           +TY  +D+A  K +  E   D +IYV+ +  S +    K+    +  +   K +++ +  
Sbjct: 319 FTYDTSDIATLKQRIEEEKADWIIYVVDAGQSLHFETLKKCAIHSGFLDPSKVRMDFV-G 377

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             V L  D    K   R+GD + L  ++DE                             +
Sbjct: 378 FGVVLGEDKK--KFKTRSGDTVRLASLLDEGIKRTRDKLVEKGRDKVLTDEELKLAETAL 435

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +++  L    +    F F K+ +  K N   Y+ YA  R RSI         DL+ 
Sbjct: 436 AYGCIKYADLCHNRNHDYVFSFDKMLD-DKGNTAVYLLYALTRIRSIINNLGTYTQDLNE 494

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            +         S     E +L   L  +P VI   T     + L  YLYD+A+ F   + 
Sbjct: 495 PI---------SLDHDKEWKLAKTLLRFPEVISKITDDFCLHHLCEYLYDVATTFSEFYD 545

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     +         K+   R+ L    A  + +GLN++G+ + + M
Sbjct: 546 NCYCIEKNPQ-TGEIVKVFTGRILLCKVTAEYMETGLNLLGISTVSRM 592


>gi|255580290|ref|XP_002530974.1| arginyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529450|gb|EEF31409.1| arginyl-tRNA synthetase, putative [Ricinus communis]
          Length = 615

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 126/622 (20%), Positives = 235/622 (37%), Gaps = 90/622 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG------L 59
           +   +L   +  +  +  +  +     ++   R    G    N AM L   L        
Sbjct: 36  NLKKQLAKLI-AVSLRTTLPTQFDIDPLVASCR-TKFGDYQCNNAMGLFSKLRGTNSNYQ 93

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P+ + + I+  +     ++S  +AG GF+N+ LS  ++ + +  ++V+GIE     +  
Sbjct: 94  NPVAVGQAIMRNLPFSKMIESSSVAGPGFVNIVLSNKWMAENIQKMLVNGIETWAPKL-S 152

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    +HVGH R  ++GD+LA ++ FS  EV R  ++ D G Q   L  
Sbjct: 153 IKRAVVDFSSPNIAKELHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIE 212

Query: 180 SVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            +F RY      N+    +L   Y        +  E  ++    ++    +   P  +  
Sbjct: 213 FLFERYPNFEDVNECAIDNLQAFYKASKQRFDIDFEFKERAQKAVVRL--QGGEPKYRQA 270

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             Q +  I R +   +  +  + + E      +P  I  +I+ L +QG V E        
Sbjct: 271 WAQ-ICDISRREFDMVYQRLRVQLEEKGESFYNPY-IPGVIEALTQQGLVEES------- 321

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   +  +++F   + G D+    +KSDG Y Y + DLA    +  E   + +IYV
Sbjct: 322 --------EGARVIF---IEGYDIPLIAVKSDGGYNYASTDLAALWYRLNEEKAEWIIYV 370

Query: 356 MGSDHSGYVKRLEAVAAAVSE------KKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             +  + + + +   A              ++  +    V    DG   +   R+ + + 
Sbjct: 371 TDAGQNQHFEMVFKAAKRAGWLLSADNLYPKVTHV-GFGVLKGEDGK--RFRTRSTEVVR 427

Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                             VG  +V++  L         F+F 
Sbjct: 428 LVDLLDEAKMRSKTALIERGKAEEWTDDELEQTAEAVGYGAVKYADLKNNRMTDYKFNFD 487

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++    K N   Y+ YA+AR  SI R++         D+               E  L +
Sbjct: 488 QMLN-DKGNTAVYLLYAHARICSIIRKSG-------RDIEELKNTTTLVLDHADERSLGL 539

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL  +   +E A I   P  L  YLY L+  F   +S+ +       V  +  +    RL
Sbjct: 540 HLLHFAETVEEACINLLPSVLCEYLYSLSEYFTKFYSNCQ-------VVGSGEE--RSRL 590

Query: 561 QLVHAVASIINSGLNIIGVESP 582
            L  A A ++     ++G+   
Sbjct: 591 LLCEATALVMRKCFFLLGIVPV 612


>gi|257413782|ref|ZP_05591795.1| arginine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202281|gb|EEV00566.1| arginine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 595

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 112/634 (17%), Positives = 231/634 (36%), Gaps = 91/634 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  + + + +       + K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKILDLITDEVTKAFTDCGYDAKYGKVTLSNRPDLCE---YQCNGAMAAAKEYKKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ + A++              GF+NL L  ++L   ++ +      +G         +
Sbjct: 58  IADEVAAKLAEASMFSMTESVKPGFLNLKLDEAFLASYVADMQKDEGRFGCEKAKNPKTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F+G++V  + ++ D G Q+  +   +  
Sbjct: 118 MIDYGGPNVAKPLHVGHLRSAIIGESIKRIGKFAGHKVIGDVHLGDWGLQMGLIITELKL 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R    +Y +++   EG YP      +  EL + Y +      E++        +   +  
Sbjct: 178 RQPDLVYFDEN--FEGEYPKEAPFTI-SELEEIYPTASKKSKEDEAYKEAAMQATYELQN 234

Query: 244 I------------------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                              ++ + + LN+  +++  E D        I  ++  +   G+
Sbjct: 235 GRKGYQALLSHILNVSVTDLKKNYENLNVSFELWKGESDAQPY----IPAMVQKMKDDGF 290

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
            Y        S      D+         T   +     +LKSDG+  Y   DLA    + 
Sbjct: 291 AY-------VSDGALVVDVKE------DTDTKEIPPCMILKSDGASLYNTTDLATIVWRE 337

Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKR 403
           E    D +IYV+      +  ++   A      K +  +  L       +DG P K   R
Sbjct: 338 EDYDPDEIIYVVDKRQELHFVQVFRCARKTGLVKPETELKFLGFGTMNGKDGKPFK--TR 395

Query: 404 AGDFITLRHVVDE--------------------------------VGSDSVRFMMLWRKN 431
            G  + L ++V E                                V   ++++  L  + 
Sbjct: 396 DGGVMRLEYLVSEIDNEMLKKITENQKAKENLGISEEEAKETAKTVALAAIKYGDLSNQA 455

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           S+   FD  +     + N   Y+ Y   R +SI  +  D+    +  +         S  
Sbjct: 456 SKDYIFDIDRFTSF-EGNTGPYILYTIVRIKSILHKYHDLGKSAEGAVIT-------SAH 507

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             SE  L++ ++++  VI+ A     P+K+  Y+YDLA+ F+  +         + +   
Sbjct: 508 SESEKNLMLEISKFNAVIDGAFADTAPHKICSYIYDLANAFNSFYH------ETKIMSEE 561

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +    ++L+    S++ + ++++G  +P  M
Sbjct: 562 DETVQKSYIRLLELTKSVLETSIDLLGFSAPERM 595


>gi|291545668|emb|CBL18776.1| arginyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 588

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 115/629 (18%), Positives = 245/629 (38%), Gaps = 88/629 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                 ++   L     K   +       V  RP  C       N AM  ++     P  
Sbjct: 1   MKKIMEQMAEELSAAFEKAGYDPSYGKVTVSNRPDLCE---YQCNGAMAGAKAYHKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ +VA++          +   GFINL ++P ++ + ++ +     +           +
Sbjct: 58  IADDVVAQLSDSRIFSRAEVVKPGFINLDVNPEFVAEYMNKMAED-EKLSVETAKNPKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++   N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 IIDYGGPNVAKPLHVGHLRSAIIGESIKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKH 176

Query: 184 RYQQALYNNDS---DLP----------EGYYP---GVYLKHVGKELADKYSSELLNFPEE 227
           R  + +Y +DS   + P          E  YP   G   +          ++ LL   + 
Sbjct: 177 RKPELVYFDDSFTGEYPAEAPFTISELEEIYPCASGKSKEDEAYRNEALEATHLLQQGKP 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            ++ +  ++ +   +  ++ +   LN+  D++  E D        I D+++++ ++G+ Y
Sbjct: 237 GYMALW-NHIMNVSVTDLKRNYANLNVDFDLWKKESDAQPY----IPDMVEDMKKRGFAY 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
           E                D+  L+       D  + P   LLKSDG+  Y   DLA    +
Sbjct: 292 E----------------DQGALVVDVKEESDTKEIPPCMLLKSDGASLYTTTDLATIVER 335

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSK 402
            +    D ++YV+      +  ++   A        +  +  L       +DG P K   
Sbjct: 336 MKLFQPDEILYVVDKRQELHFIQVFRCARKTGLVNPETKLSFLGFGTMNGKDGKPFK--T 393

Query: 403 RAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLD 436
           R G  + L +++                            VG  ++++  L  + ++   
Sbjct: 394 REGGVMRLENLIADIDEEMYRKIVENRSVKDKDAKDTAKIVGLSAIKYGDLSNQATKDYI 453

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +     + N   Y+ Y   R +SI  +          DL    ++P     + SE 
Sbjct: 454 FDVDRFTSF-EGNTGPYILYTIVRIKSILNRYVQEGG----DLSTGKILPA---VNASEK 505

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ L+ +  ++ENA   + P+K+  Y+Y++++ F+  +         + +   ++   
Sbjct: 506 NLMLQLSGFAAMVENAFEEKAPHKICAYIYEVSNAFNSFYH------ETKILSEEDQAQK 559

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              LQL+     ++ + ++++G  +P+ M
Sbjct: 560 ESFLQLLQLTRRVLETSIDLLGFSAPDRM 588


>gi|87306945|ref|ZP_01089091.1| arginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290318|gb|EAQ82206.1| arginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 654

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 136/676 (20%), Positives = 240/676 (35%), Gaps = 113/676 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      R    L  +  +      +L+  +I    D   G    N AM L + LG +
Sbjct: 1   MNILQALRGRFDAVLSTMVDETA---PLLE--MIRPASDTKFGDYQANCAMPLKKKLGRE 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              IA  IV +I +    + + IAG GFIN+ L  +++   L++ V      G  L+ + 
Sbjct: 56  SREIAAEIVEKIDLSDMCEPLEIAGPGFINIKLKDAWIEAQLAAAVTD-ERIGVPLVAEP 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  ++F S N   PMHVGH R  V+GD+LA+ + F G+EV  + ++ D G Q   +   
Sbjct: 115 KKYILDFSSPNVAKPMHVGHIRSTVIGDSLANTLRFLGHEVITDNHLGDWGTQFGMIIYG 174

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLK------------------HVGKELADKY---- 217
              +R   A   +        Y  V                      +  EL ++     
Sbjct: 175 FKHFRDNDAYAESPVAELSRLYREVRKIIDFVDGQKALPARKAKLSEMSAELEERKAAPS 234

Query: 218 -SSELLNFPEEKWLPIVKDYSVQAMMKIIRD-----------DLKALNIQH-----DIFI 260
              +  +    K L  ++  + +A  ++ +D           +   L  +H      +  
Sbjct: 235 TGDKGADKKAAKELQKLERQANEASKELTKDQAKLAELAADPEFAKLAAEHADISSAVLN 294

Query: 261 SEDDFHRGDP--------------SPIRDIIDNLARQGY------VYEGILPPPKSKTTQ 300
                H GD                 I+ I + L  +         Y   L P      +
Sbjct: 295 ETAKLHAGDEENLALWHEFLPKCREDIQRIYERLNVKFDHELGESFYHDQLAPVVDSFIE 354

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
           +      +      + G      + K DG++ Y   DLA  + +  E   D ++YV+   
Sbjct: 355 QGFAKESEGALCVFLEGFKAPMIIRKKDGAFLYATTDLATIQYRMNEWRPDAILYVVDFR 414

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              + ++L A A        ++  +    V +  DG P K   R+GD + L  ++DE   
Sbjct: 415 QGDHFEKLFAAAKKWGYTDVELKHVSFGTV-MGEDGKPYK--TRSGDTVGLEGLLDEAVS 471

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG   +++  L +       F +  +    + N 
Sbjct: 472 RAEKIVRSNDKDGLLSDEQYKDVAQDVGIGGLKYGDLSQNRETDYVFSYDTMLAL-RGNT 530

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAYAR +SIFR  +     L        +         +E  L   +   P  ++
Sbjct: 531 ATYMQYAYARSQSIFRNGEIDIAALRSSGAKICI------TSPAERALATKVLRLPEALQ 584

Query: 511 NATIAQEPYKLAFYLY-DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                  P +L  YL+ +LA  +   +           ++A   +    RL L    A +
Sbjct: 585 EMVADYRPNQLTIYLFEELAKAYSTFFEQC------PVLKAETAEQKQSRLLLCDLTARV 638

Query: 570 INSGLNIIGVESPNEM 585
           I  GL ++G+ + ++M
Sbjct: 639 IQQGLALLGISTVDKM 654


>gi|255546293|ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis]
 gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase, putative [Ricinus communis]
          Length = 592

 Score =  361 bits (926), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 126/627 (20%), Positives = 232/627 (37%), Gaps = 96/627 (15%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLGLD 60
            L    +   +  L+E        + ++             G    N AM L S+  G +
Sbjct: 13  NLKKQIAKLFEASLRETVPSEPDVEPLVAACT------AKFGDYQCNNAMSLWSKIKGKN 66

Query: 61  -----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
                P  + + I+  +     ++S  +AG GF+N+ LS  ++ K +  +++ GI+    
Sbjct: 67  TEFKGPPAVGQAIMKNLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDGIDSWAP 126

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            +    +  ++F S N    MHVGH R  ++GDTLA ++ FS  +V R  ++ D G Q  
Sbjct: 127 KLLV-KRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVGDWGTQFG 185

Query: 176 TLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWL 230
            L   +F ++      N+    DL   Y           E  ++    ++     E K+ 
Sbjct: 186 MLIEFLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQGGEPKYR 245

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                    +  K      + L +Q +    E  ++   P     IID L+ QG V E  
Sbjct: 246 QAWAQICDIS-RKEFDKVYQRLGVQLEEK-GESFYNPYIPG----IIDALSNQGLVEES- 298

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349
                         +  +++F   + G ++   ++KSDG + Y + DL     +  E   
Sbjct: 299 --------------EGARVIF---IEGVNIPLIVVKSDGGFNYASTDLTALWYRLNEEKA 341

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMSKRA 404
           + +IYV       +   +   A   S   A  ++      +   + L  DG   +   RA
Sbjct: 342 EWIIYVTDVGQQQHFDMVFKAAKRASWLPADDSMFPKASHVGFGLVLGDDGK--RFRTRA 399

Query: 405 GDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELL 435
            + + L  ++DE                             +G  +V++  L        
Sbjct: 400 TEVVRLVDLLDEAKTRSKAVLVERGKAEEWTEQELEQIAEAIGYGAVKYADLKNNRLTNY 459

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F++ ++    K N   Y+ YA+AR  SI R++         D+     +         E
Sbjct: 460 TFNYDQMLN-DKGNTAVYLLYAHARICSIIRKSG-------RDMEELKKMGSLVLDHPDE 511

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L +HL ++   +E A     P  L  YLY+L+  F   +S+ +       V  +  + 
Sbjct: 512 RSLGLHLLQFAETVEEACTNLLPNVLCEYLYNLSEYFTKFYSNCK-------VVESPEE- 563

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582
              RL L  A A ++     ++G+   
Sbjct: 564 -TSRLLLCEATAVVMRKCFFLLGIVPV 589


>gi|257460580|ref|ZP_05625681.1| arginyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441911|gb|EEV17053.1| arginyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 598

 Score =  361 bits (926), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 152/548 (27%), Positives = 256/548 (46%), Gaps = 47/548 (8%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAEL-----IVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           G  + N A +    L       A         A +    +  +         N  +S + 
Sbjct: 93  GDFAKNDAELGRGILPASERICAGEPVCNGFAANLAASGNDAAKSQNSAARQNF-ISQNS 151

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
                +S+ V   +  RN      K+ +E++SANPTGP+H+GH R AV GDT A +  + 
Sbjct: 152 EAAS-NSVAVPKCDEARNSAAASQKILLEYISANPTGPLHIGHVRGAVYGDTFARIGGYL 210

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G+ V  EYYINDAG QI  L  S+  R ++ L   D   PE YY G Y+  +      ++
Sbjct: 211 GHRVDTEYYINDAGNQIELLGTSIALRARE-LAGEDVSYPEKYYRGEYIDEIIPLAHAQF 269

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             E+  F +E  +  + +++   ++KII+ DL    I    + SE   +      +   I
Sbjct: 270 GDEI--FRDESRILQLAEFAKDEVLKIIQKDLADAGIHIQNWASEKSLY----GELEPTI 323

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L R G +YE                   ++  RS+ +GD+ DR +++ D   TY A D
Sbjct: 324 RKLERSGKMYE----------------QESKIWIRSSQLGDEKDRVVIREDARPTYLAGD 367

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           + Y   K+ERG++  I + G+DH GY+ RL+A    +   ++++ ++L ++V L +DG  
Sbjct: 368 IVYHNNKFERGYERCINIWGADHHGYIARLKAAVHFLGYDESRLEIILMQMVNLLKDGQT 427

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSKRAG+ I +  V+  +G D++RF+ + +K    L+FD  ++  +   NP+FY+ YA
Sbjct: 428 YKMSKRAGNAILMSDVLAAIGRDAMRFIFISKKGETPLEFDVDELAREDSSNPIFYINYA 487

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR   IF +A     D+    F           D + L L         ++ +A  ++ 
Sbjct: 488 HARVNQIFTKAGKREADVLGADFGT--------LDEAGLGLAFAALGLNEILNDAFNSRG 539

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             KL  +L  LA+ FH +++  R       V + N      +L+L   VA  I +   ++
Sbjct: 540 LQKLPDFLKALAADFHKYYNENR------VVGSENED---AKLKLFALVALSIRTAFALM 590

Query: 578 GVESPNEM 585
           G+ +  +M
Sbjct: 591 GLSAKEKM 598


>gi|20094195|ref|NP_614042.1| arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|23822192|sp|Q8TXB6|SYR_METKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19887217|gb|AAM01972.1| Arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 592

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 157/626 (25%), Positives = 266/626 (42%), Gaps = 98/626 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + +++ +  +      E   L  + I+         L+T  A+ L++ L  +P  +AE
Sbjct: 18  IRTSIRDAISSV-----YEVDELIEVPIDENPPVEGADLATPVALSLAKELDENPRELAE 72

Query: 67  LIVARIKIDP--DVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
            IV    +D    V+  ++ G GFINL L  S Y    L SI   G EYG   +G G  V
Sbjct: 73  TIVEESDLDDVVFVEKAWVEGPGFINLKLDRSQYAALTLRSIFYYGEEYGSLDLGMGRPV 132

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E  SANP GP+H+GH R AV+GD LA  M F+ Y V  +YY+ND G QI  LA    W
Sbjct: 133 ILEHTSANPNGPLHIGHGRNAVIGDILARCMVFTNYGVEVQYYVNDMGKQIAMLA----W 188

Query: 184 RYQQALYNN--DSDLPEGYYPGVY------------LKHVGKELADKYSSELLNFPEE-K 228
           +Y +       + + P+ ++  +Y            L+ V +     Y   L+      +
Sbjct: 189 KYIKEGRPEVPEGEKPDEFFGKLYTEAAREIEEDPELEEVVERFLRSYERYLVEEESRAE 248

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            +       V+  ++     L+ L + HD F+ E +F R       +I++ L   G   E
Sbjct: 249 RIADAFQTVVEECLRGHIQTLERLRVAHDRFVYESEFARD----ALEIVEKLLDMGVAEE 304

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                           +   ++      G D +  L +SDG+  Y   D+AY   K  R 
Sbjct: 305 ---------------REDGAVVVDLEDYGIDKELVLTRSDGTTLYTTRDIAYHLWKLGR- 348

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
              ++ V+G+DH   V++L AV   + E   +I+V+  E + L        MS R G ++
Sbjct: 349 ATFVVDVLGADHKLAVEQLRAVLDMLEENPDRIDVVFYEFIHLPEG----SMSTRKGRYV 404

Query: 409 TLRH-----------------------------VVDEVGSDSVRFMMLWRKNSELLDFDF 439
           TL                               + +E+   +VRF +     ++ ++FD+
Sbjct: 405 TLDEFLEEAKKRALEKMKAAGVAEELSDEEREKIAEEIAIGAVRFAIARVSPNKPIEFDW 464

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +  +  +  P  ++QYAYAR +SI R+A +     D               D    +LI
Sbjct: 465 DEALDFRRGGP--FIQYAYARAKSILRKADEEVNRFDAAYLN----------DDHSFELI 512

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + ++++PR +      + P  LA Y YDLA  FH  +        +  +   + ++   R
Sbjct: 513 LKMSKFPRHVAQCVRKRRPDILAEYAYDLAKTFHTFYE------EVPVLHVEDDEVREAR 566

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+LV A   +  + +N++G+ +   M
Sbjct: 567 LKLVEAFTIVAENLMNLLGIPTLERM 592


>gi|327440673|dbj|BAK17038.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 559

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 128/614 (20%), Positives = 259/614 (42%), Gaps = 86/614 (14%)

Query: 3   LFADFSSRLKNYL-KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           ++   +S +++ L  ++    ++E+      ++ERP+    G ++      L++ L   P
Sbjct: 1   MYKKIASIIQDALPHKLITNTEIEQ------LLERPKYQHLGDIAFP-CFTLAKSLKKAP 53

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             IA  I   IK D   + V + G G+INL+L+   + + + + ++   E       +  
Sbjct: 54  NVIAIEIGDNIKSDFIQE-VHVVG-GYINLFLNKLQVTRDVMAKIMIAHESYGQQEIQQK 111

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + I+F S N   P  +GH R  V+G+ LA++   +GY V R  ++ D G Q   L ++ 
Sbjct: 112 NIVIDFSSPNIAKPFSMGHLRSTVIGNALANIAEKNGYNVIRVNHLGDWGTQFGKLLVAF 171

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-- 238
             W  ++ +  +  +     Y   + +    +  ++ +       E+     +  ++   
Sbjct: 172 QLWGEKERVQQSPIEELLKLYVKFHDEAETNKSLNEEARSAFKALEDNDPQAMALWTWFK 231

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A ++  +   + L+IQ D +  E  ++      ++ ++D L ++  + E       S  
Sbjct: 232 SASLQEFKQIYEQLHIQFDTYEGEAFYNE----KMQSVVDELKKKQLLTE-------SDG 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356
               +++             D+   L+ K DG+  Y   DLA    +  +     + YV+
Sbjct: 281 ANVVELE-------------DMPPCLITKQDGATLYATRDLAAAFYRQAQYEPSQVFYVV 327

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G++ + + K++  V + +    +  N+       + +DG   KMS R G  I L+ V+ E
Sbjct: 328 GNEQTLHFKQVFQVISKMGYPWSG-NLKHVPFGMMLKDGK--KMSTRKGRVILLKDVLKE 384

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  +V F  L       ++F   ++     E   
Sbjct: 385 AVETASRNIEEKNPTLNNKQNVADQVGIGAVIFNDLKNFRLNDIEFSLPQMLNFEGE-TG 443

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY +AR  SI  +AK    +               E + S  ++I  L +YP+VI +
Sbjct: 444 PYVQYTHARIHSILEKAKYTASNE----------VTVMELENSAWEVIKLLQQYPQVITD 493

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +    +P  +A Y+  LA +F+ ++++ +       +   + +L   RLQL  AVA+++ 
Sbjct: 494 SFEQVDPSLIAKYVLQLARIFNKYYANTK-------ILVEDEQL-ESRLQLCFAVATVLK 545

Query: 572 SGLNIIGVESPNEM 585
            GL ++G++SP  M
Sbjct: 546 DGLKLLGIKSPESM 559


>gi|258510427|ref|YP_003183861.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477153|gb|ACV57472.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 565

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 121/608 (19%), Positives = 234/608 (38%), Gaps = 79/608 (12%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +K  +      +          ++E P + A G L+       +R +  +P+ IAE +  
Sbjct: 4   IKRAIAHAIADVVARPTDEIARMLEYPPNPALGDLAL-PCFPFAREMRKNPVQIAEELAE 62

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           R++    V+S   A KGF+N+ L+ S +  +++   + S  +      G+G    I++ S
Sbjct: 63  RVRQVDGVESAH-AEKGFLNIRLARSQFAERVVGQAIASVHDLFSEERGRGRTAVIDYSS 121

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N   P  VGH R  ++G  L  +M   G+ V    ++ D G Q   +  +         
Sbjct: 122 PNIAKPFGVGHLRSTIIGHALKRMMREDGWRVEGVNHLGDWGTQFGKVIAAYL------K 175

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIR 246
           + ++ ++ +     ++  +V      + S EL +     W   +++    + +     I 
Sbjct: 176 WGSEDEVRKDPVKELFRLYVRFHQEAESSPELEDEG-RLWFKKLEEGDPEATRLWRWFID 234

Query: 247 DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + L+A    +D+   E + + G+      +  I+  L  +G + E        +  +  D
Sbjct: 235 ESLRAFKQVYDLLGVEFEHYIGESFYNDKMDAIVQELREKGLLVE-------DQGAEVVD 287

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362
           +    +              ++KSDG+  Y   DLA    ++   G D ++YV+G++   
Sbjct: 288 LSAYGM----------PPCIIVKSDGTSIYATRDLAAADYRHHAFGADTLLYVVGAEQKL 337

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-------- 414
           + +++  V   +    A+  V +   +  +      ++S R G  + L  V+        
Sbjct: 338 HFEQVFKVLELMGRDYAKNCVHVQFGLMKFNG---QRLSTRRGHVVYLEDVLQKAIEETR 394

Query: 415 -----------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                             +VG  +V F  L       +DF +  V     E    YVQY 
Sbjct: 395 AIIDEKNPGLENKDAIARQVGVGAVIFNDLKTYRVHEVDFRYEDVLNFDGE-TGPYVQYT 453

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  S+ R+A+                  + E D +E  LI  LA+    +E A    +
Sbjct: 454 HARASSVLRKAEADA---------AAKWAPDYEPDDAEWALIFLLAQANESLERAVDTYD 504

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y   +   F+  +           +QA+       RL L  AV   +   L ++
Sbjct: 505 PSVIARYALQMCHAFNRFYHDH------PILQADEPA-RTSRLALTRAVREALAKSLYLL 557

Query: 578 GVESPNEM 585
           G+E+P EM
Sbjct: 558 GIEAPEEM 565


>gi|218290406|ref|ZP_03494536.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239534|gb|EED06728.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 566

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 125/614 (20%), Positives = 240/614 (39%), Gaps = 86/614 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
               + + + ++  +       +D I  ++E P + A G L+       +R +  +P+ I
Sbjct: 4   IKRAIAHAIADVVAR------PVDEIARMLEYPPNPALGDLALP-CFQFAREMRKNPVQI 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKV 123
           AE +  R++    V+S   A KGF+N+ L+ S +  +++   + S  E      G+G   
Sbjct: 57  AEELAERVRQADGVESAQ-AEKGFLNIRLARSEFAERVVGQAIASVHELFSEERGRGRTA 115

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++ S N   P  VGH R  ++G  L  +M   G+ V    ++ D G Q   +  +   
Sbjct: 116 VIDYSSPNIAKPFGVGHLRSTIIGHALKRMMREDGWRVEGVNHLGDWGTQFGKVIAAYL- 174

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
                 + N+ ++ +     ++  +V      + S EL +     W   +++    + + 
Sbjct: 175 -----KWGNEDEVRKDPVKELFRLYVRFHQEAESSPELEDEG-RLWFKKLEEGDPEATRL 228

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
               I + L+A    +D+   E + + G+      +  I+  L  +G +        K +
Sbjct: 229 WRWFIDESLRAFKQVYDLLGVEFEHYIGESFYNDKMDAIVQELREKGLL-------VKDQ 281

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +  D+             D     ++KSDG+  Y   DLA    +++  G D ++YV+
Sbjct: 282 GAEVVDLSA----------FDMPPCIIVKSDGTSIYATRDLAAADYRHKAFGADTLLYVV 331

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-- 414
           G++   + +++  V   +    A+  V +   +  +      ++S R G  + L  V+  
Sbjct: 332 GAEQKLHFEQVFKVLELMGRDYAKNCVHVQFGLMKFNG---QRLSTRRGHVVYLEDVLQK 388

Query: 415 -----------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   +VG  +V F  L       +DF +  V     E   
Sbjct: 389 AIEEARAIIDEKNPALENKDAIARQVGVGAVIFNDLKTYRVHEVDFRYEDVLNFDGE-TG 447

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY +AR  S+ R+A+                  + E D +E  LI  LA+    +E 
Sbjct: 448 PYVQYTHARASSVLRKAEADAA--------AAKWAPDYEPDDAEWALIFLLAQANESLER 499

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P  +A Y   +   F+  +           +QA+       RL L  AV   + 
Sbjct: 500 AVDTYDPSVIARYALQMCHAFNRFYHDH------PILQADEPA-RTSRLALTQAVREALA 552

Query: 572 SGLNIIGVESPNEM 585
             L ++G+E+P EM
Sbjct: 553 KSLYLLGIEAPEEM 566


>gi|254446754|ref|ZP_05060229.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198256179|gb|EDY80488.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 584

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 123/617 (19%), Positives = 234/617 (37%), Gaps = 75/617 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D + ++ + + E      +E      I   RP D   G L  N A+  ++    +P  IA
Sbjct: 6   DVAKKIDSLVLEAAASAGLENSFSSEI---RPADPRFGDLQANGALPYAKRNKNNPRQIA 62

Query: 66  ELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIV-VSGIEYGRNLIGKGT 121
           + +V +++ +P+      + IAG GFIN    PS+    LS+       +     +  G 
Sbjct: 63  QSLVEKLEANPNLTEHADISIAGPGFINFKFKPSFQLAWLSAFRDRESFKSAAKALHAGE 122

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +++ S N    MHVGH R  V+G+ +  L+ F G EV R+ +I D G     L  + 
Sbjct: 123 KVVVDYGSPNTAKQMHVGHIRSIVIGEAICRLLEFCGAEVVRDNHIGDWGTPYGKLFYAY 182

Query: 182 F-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-WLPIVKDYSVQ 239
                 +AL  +  +  E  Y           + ++   EL++    K     + +   +
Sbjct: 183 KRHLDAKALERDPLEELERLYKLGSKLADDAAVLEECRQELVDLQAGKPESMALWETVNK 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++ +    K L++ +D ++ E  +       +  +   L   G               
Sbjct: 243 LSIQGLETIYKELDVHYDCYLGESFY----RDKVEQVYQELKDNGL-------------- 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
              +  +  ++          ++P  + KSDG+  Y   DLA    + E     +++ V 
Sbjct: 285 --SEESKGAVVVFHPEHPRFKEQPFIIRKSDGASNYATTDLATMLYRNEHFKATSIVIVT 342

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK-MSKRAGDFITLRHVVD 415
                 + ++L+       EK  +       ++    +G   K +  R+GD I LR ++D
Sbjct: 343 DDRQKDHFEQLDLTTKKWFEKTRRQMPKFSHVMFGKINGEDGKVIKSRSGDPIRLRQLID 402

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           +G +++++  L +  +    F + K+    + 
Sbjct: 403 EAVERAAKIVREKNATLPEDEIKHIAEVIGVNAIKYADLSQNRTSDYIFTWEKLLSF-EG 461

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+ YA AR +SIFR+       LD D                E+ L   +  +  V
Sbjct: 462 NTAPYLLYAAARIQSIFRK-------LDTDQLADLESKATPFETPEEIALANKIIAFVGV 514

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +++      P+ L  YL++LA  +   +S  +       V  +   +   RL L      
Sbjct: 515 LQSTIEQLRPHLLCTYLFELAGAYSSFYSANK-------VIVSESDVQARRLLLCQRTLV 567

Query: 569 IINSGLNIIGVESPNEM 585
            + SGL ++G+ +   M
Sbjct: 568 ALQSGLGLLGIPTLQRM 584


>gi|329942490|ref|ZP_08291300.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287127|ref|YP_004422028.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847723|emb|CBY16713.1| putative arginyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506631|gb|ADZ18269.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815400|gb|EGF85388.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914367|gb|AEB55200.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 562

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 145/618 (23%), Positives = 228/618 (36%), Gaps = 91/618 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L +  SS  +  +     +I+          I +      GH   N AM L+R L + 
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPD-----ITQSTKELFGHYQCNDAMKLARTLKMP 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  I  +    S+ IAG GFIN   S  +L   L S         R  +   
Sbjct: 56  PRAIAESIVNHISKN-SFSSIEIAGAGFINFTFSKEFLNLSLQSYSQDLSSGFR--VKDP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV I+F S N    MHVGH R  ++GD LA +  F G +V R  +I D G     L   
Sbjct: 113 KKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGNDVLRLNHIGDWGTAFGMLIT- 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y Q   + D +  E              L   Y      F E+      K  S   
Sbjct: 172 ----YLQEESSEDIENLED-------------LTILYKKAHARFAEDAE---FKKRSQTN 211

Query: 241 MMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKT 298
           ++ +   D KA  +   I  ISE  F       I +I+D ++ ++G  +     P   K 
Sbjct: 212 VVALQSGDPKARKLWERICEISERAFQ-----KIYNILDISIEKRGESFYNPFLPEIIKD 266

Query: 299 TQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            +K ++    D  + +F     G  +   + KSDG Y Y   DLA  + + E    D +I
Sbjct: 267 LEKKNLITISDNAKCVF---HEGFSIPLMVQKSDGGYNYATTDLAAMRYRVEHDHADKII 323

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V     S + + LEA A A      +  V       L  D    K   R+G+ I L+ +
Sbjct: 324 IVTDMGQSLHFQLLEATALAAGYLPNK-EVFSHVGFGLVLDSEGKKFKTRSGENIKLQEL 382

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +D                            +G +++++  L         F F K+  + 
Sbjct: 383 LDMAIDQAVATLKKHRPEMSEAEIAERAPVLGINAIKYADLSSHRVSDYVFSFEKML-RF 441

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   ++ Y Y R + I R+           +   ++       + SE  L + L  +P
Sbjct: 442 EGNTAMFILYGYVRIQGIKRRLG---------IEKLSLESTADIQEPSEEALALALLRFP 492

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I+       P+ L  YLY L + FH  +                      RL L   V
Sbjct: 493 EAIDLTLKELCPHFLTDYLYMLTNKFHAFFRDCHI---------EGSPHQKARLYLCALV 543

Query: 567 ASIINSGLNIIGVESPNE 584
              + +G++++G+++ + 
Sbjct: 544 EKTLATGMHLLGLQTLDR 561


>gi|118586528|ref|ZP_01543971.1| arginyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118433032|gb|EAV39755.1| arginyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 566

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 247/617 (40%), Gaps = 83/617 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      + ++   L+      K+EK      ++E+P+D   G  +      L+      
Sbjct: 1   MNFTHIIAEKINQTLENTFDLDKLEK------LVEKPKDLNRGDYAF-PTFSLAAKFHEA 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  I   I    +  +V   G  ++N ++        L   ++   ++GRN  G G
Sbjct: 54  PQKIALKIADEIDR-TNFANVKAVGP-YVNFFIQRVEFTNQLLKEILLNDDFGRNNQGAG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ I+  S N   PM +GH R  V+G+ ++ +   +GY+  +  ++ D G Q   +  +
Sbjct: 112 KKIVIDMSSPNIAKPMSMGHLRSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YS 237
                   L N +   P      +Y+K       +  + + L      W   ++D    +
Sbjct: 172 YKLWGDDKLINKN---PVDELVKLYVK----INKESETDKSLKDSGRAWFKKLEDGDPEA 224

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPP 294
           V+         LK     +D      D   G+      +  ++  LA +G + E      
Sbjct: 225 VKLWNWFKSVSLKEFQEVYDRLGVSFDSMNGEAFYNDKMEPVVKMLASKGLLTE------ 278

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
            S+  +  D+     L         +   + +SDG+  Y   DLA    +++   F   +
Sbjct: 279 -SQGAEIVDLPN---LLPKDNYPIAM---IKRSDGATQYITRDLASAIYRHDAYDFAKSL 331

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----- 408
           YV+G++   +  +++A+     +  A  ++       +  +G   KMS R G+ +     
Sbjct: 332 YVVGAEQKDHFDQMKAILKLAGDDWAD-DIEHIGFGMITMNGK--KMSTRKGNIVPLVDV 388

Query: 409 --------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                  HV +EVG+ +V F  L +  +  +DFD  K+  Q + 
Sbjct: 389 LDTARQLAAEQISEKNPGLENADHVAEEVGAGAVVFNDLQKDRNLSIDFDLEKIV-QFEG 447

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +   YVQY +AR  SI R++               +  + +  D     ++  L+ YP +
Sbjct: 448 DTGPYVQYTHARAMSILRKSGQQAI----------LNTEVTFVDEEAWPIVSRLSAYPEM 497

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+ A   +EP  +A YL  LA  F+ +++H +       +  NN K    RL LV  V  
Sbjct: 498 IKRAWQLREPSIVAKYLLSLARDFNSYYAHTK-------ILVNNEK-MQSRLSLVQGVCF 549

Query: 569 IINSGLNIIGVESPNEM 585
           ++ SGLN++GV +PN+M
Sbjct: 550 VLKSGLNLLGVSAPNQM 566


>gi|218678655|ref|ZP_03526552.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 297

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 192/299 (64%), Positives = 234/299 (78%), Gaps = 2/299 (0%)

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           MM +IR+DL ALN+ HDIF SE   H    + IR  I++L  +GYVY+G LPPPK +  +
Sbjct: 1   MMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPE 60

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH
Sbjct: 61  DWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADH 119

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            GYVKRLEAVA  VSE KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG D
Sbjct: 120 GGYVKRLEAVARGVSEGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRD 179

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           SVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDLD    
Sbjct: 180 SVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDLDVSTV 239

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                      D +ELQL+  LAE+PRV+E A  +QEP++LAFYLYDLAS F  HW+ G
Sbjct: 240 EL-AKTVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRLAFYLYDLASSFPAHWNKG 297


>gi|294056123|ref|YP_003549781.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615456|gb|ADE55611.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 592

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 129/626 (20%), Positives = 241/626 (38%), Gaps = 75/626 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M ++ + S  ++  L++I      E    D +   RP D   G    N  +  ++    +
Sbjct: 1   MQIWFNPSQAIETALQQIAA--DTEGFGPDFVPGVRPADPKFGDFQANGVLGFAKRNKAN 58

Query: 61  PLTIAELIVARIKI----DPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRN 115
           P  + + ++   K     DP++  + +AG GFIN   +P +L + L +    S  + G  
Sbjct: 59  PRDLGQQLIDAAKTSGQFDPELVELSLAGPGFINFKFTPQFLWQWLQTYSTTSDYQSGAR 118

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            + +G KV I++ SAN     H+GH R  V+G+ +A ++ F G + TR+ ++ D G    
Sbjct: 119 ELKQGRKVVIDYPSANTAKQAHIGHLRPMVIGEAIARMLDFCGADTTRDNHVGDWGTNFG 178

Query: 176 TLALSVFWRYQQALYNNDSDLP---EGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLP 231
           TL + +           D+ L    + Y  G  L+    EL D   +EL+   + +    
Sbjct: 179 TLIMKIKRDGVDLAQLGDNPLAALDQLYKDGSALETEQPELRDVSRNELVLLQDGDATNT 238

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            +    V   M         + +  DI + E  +       +  I   L+  G   E   
Sbjct: 239 QLWQQIVDISMAAFDKLFAQMGVHVDIALGESFY----RDKVERIYTELSDIGLAEE--- 291

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
               S        D  +   R        +  + K DG+  Y + DLA    + E    D
Sbjct: 292 ----SDGALVVWHDEVKKFARDNERPYPFN--IRKKDGASNYASTDLATILYRVEEFNAD 345

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            ++Y+  +    + ++L                 +N +    + L  D  P K   ++G+
Sbjct: 346 EVVYLTDARQQDHFQQLFLTTEKWFKAKQYPLPTMNHVWWGTI-LGEDKKPFK--TKSGE 402

Query: 407 FITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            I L+ ++DE                           VG  ++++  L    ++   F++
Sbjct: 403 SIKLQELLDEARERAFAVVTEKNGELPEDERREIANAVGIGALKYSDLSSNRTQDYVFNW 462

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+ YA AR  SIFR+A     +++ D       P E+    +EL L 
Sbjct: 463 DRMLSF-EGNTAPYLLYAVARINSIFRKA-----EMNPDAAISGASPLET---DAELALA 513

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L      +E       P+ L  YLY+LA  +   ++  +       V  + + +   R
Sbjct: 514 RKLMGLVNALELTLNDLRPHFLCTYLYELAGAYSSFYNANK-------VMVDEQDIRARR 566

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L     +++ +GL ++G+     M
Sbjct: 567 LLLCARTRTVLITGLKLLGITPLERM 592


>gi|154504604|ref|ZP_02041342.1| hypothetical protein RUMGNA_02110 [Ruminococcus gnavus ATCC 29149]
 gi|153795086|gb|EDN77506.1| hypothetical protein RUMGNA_02110 [Ruminococcus gnavus ATCC 29149]
          Length = 587

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 117/625 (18%), Positives = 234/625 (37%), Gaps = 87/625 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   +KE       +       +  RP  C       N AM  ++     P+ IA 
Sbjct: 4   LLELITIEMKEAFEAAGYDAAFAKVTLSNRPDLCE---YQCNGAMAAAKTYKKAPIMIAN 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA ++     +       GFINL + PS+    L+ +  S  + G   +     + ++
Sbjct: 61  DVVAGLQEKDCFEIAEAVNPGFINLKVKPSFAAAFLNEMAAS-EKLGVEEMETPKTIMVD 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++  ++ + G +V  + ++ D G Q+  +   +  R  
Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESVKRILRYKGNKVIGDIHLGDWGYQMGLIITELQKRKP 179

Query: 187 QALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK------------WLP 231
           +  Y ++    + P+     +         A  Y+ E   + E+                
Sbjct: 180 ELPYFDENFTGEYPKEAPFTIGELEEIYPTASAYAKEHEEYREKALQATFLLQNGHPGFR 239

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            + ++ +   +  ++ +   LN+  D++  E D  +     I D+++ L  +GY +    
Sbjct: 240 AIWNHIMAVSVADLKKNYANLNVSFDLWKGEADAQKY----IPDMVEMLKEKGYAHY--- 292

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-R 347
                        D   L+       D  + P   +LKSDG+  Y   DLA    + E  
Sbjct: 293 -------------DEGALVVDVQEETDKKEVPPCMILKSDGAALYDTTDLATLVEREELY 339

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGD 406
             D +IYV+      +  ++   A      K +  +  L       +DG P K   R G 
Sbjct: 340 QPDEVIYVVDKRQELHFVQVFRCAKKTGIVKPETELEFLGFGTMNGKDGKPFK--TREGG 397

Query: 407 FITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
            + L +++ E                          VG  ++++  L  + S+   FD  
Sbjct: 398 VMRLENLIREINEEMYKKIMDNRTVSEEEAKKTAQMVGLAAIKYGDLSNQASKDYVFDVD 457

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +     + N   Y+ Y   R +SI  + ++     D  +   +           E  L++
Sbjct: 458 RFTSF-EGNTGPYILYTIVRIKSILNKYQEENSLEDLVIREAS--------SEFEKALML 508

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
             A++  VIE       P+KL  Y+YDLA+ F+  +         + +   + +     +
Sbjct: 509 ECAKFNDVIETVYEETAPHKLCAYIYDLANAFNKFYH------ETKILSEEDAEKKKGYI 562

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L+     ++ S ++++G E+P  M
Sbjct: 563 ALLKLTKEVLESCIDLLGFEAPERM 587


>gi|307718710|ref|YP_003874242.1| hypothetical protein STHERM_c10230 [Spirochaeta thermophila DSM
           6192]
 gi|306532435|gb|ADN01969.1| hypothetical protein STHERM_c10230 [Spirochaeta thermophila DSM
           6192]
          Length = 587

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 240/615 (39%), Gaps = 80/615 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            R++  L ++  +  +   +LD + +  +RP     G ++       ++     P  IAE
Sbjct: 15  ERIRTVLLDLAREKGL---LLDEVGLVAQRPPSSQFGDVAFPL-FGFAKVFRTAPQKIAE 70

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNI 125
            +VAR+  +  V  +  AG G++NL+L        +LS I  +G  YG   + +  ++ +
Sbjct: 71  EVVARLLPEGAVRKIEGAG-GYVNLFLDREAFALSVLSDIAHAGPGYGAGTLHQDKRIMV 129

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF   N   P+H+GH R  ++G++++ ++A  G +V +   IND G  I    L+     
Sbjct: 130 EFSCPNTNKPLHLGHMRNNILGESVSRILASQGADVLKVNLINDRGIHICKSMLAYKKFG 189

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPI--VKDYSVQ 239
           +          P+ +    Y+K          A++ +  +L   E+    +  + +   +
Sbjct: 190 EGKTPEEVGKKPDHFVGDFYVKFNEWAKEDSTAEEQARRMLRAWEDGDAEVRALWEKMNR 249

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++ I    +   I  D    E D +       RD++      G  Y+           
Sbjct: 250 WAIEGIEQTYRRTGISFDKIYYESDTYLLG----RDLVLKGLEDGVFYQ----------- 294

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
                +   +    + +G D  + LL+SDG+  Y   DL     +Y +  FD +IYV+ S
Sbjct: 295 ----EEDGSVWVDLSEIGLDK-KVLLRSDGTSLYLTQDLGTAVARYQDWAFDLLIYVVAS 349

Query: 359 DHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
           + + + + L  V   +    A+ +  L   +V L       KM  R G  +    ++D  
Sbjct: 350 EQNYHFRVLFYVLEKLGFSWAKNLYHLSYGMVNLPEG----KMKSREGTVVDADDLLDRL 405

Query: 416 -------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     +   ++ + +L    ++ + F+  +    +  N 
Sbjct: 406 VEMAREEIREKGRVDEVEDIDRTAEAIALGALHYFLLQVSPNKDMIFNPKESLSLT-GNT 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QY  AR  S+ R+A          + P   +P     D +  +LIV L+++P V+E
Sbjct: 465 GPYLQYMGARICSMERKADPSL------VVPVEEVPTAELVDDASWELIVLLSQFPEVVE 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P  +  +LY+L   F   +           +   N+     RL L   +  ++
Sbjct: 519 SAAREYNPSLVIGFLYELGKTFSSFYHDN------PIITHPNKDTARARLALARGIRQVL 572

Query: 571 NSGLNIIGVESPNEM 585
            +G  ++ +     M
Sbjct: 573 ENGFRLVNIPFLERM 587


>gi|84490352|ref|YP_448584.1| arginyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|109895002|sp|Q2NE12|SYR_METST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|84373671|gb|ABC57941.1| ArgS [Methanosphaera stadtmanae DSM 3091]
          Length = 560

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 139/614 (22%), Positives = 254/614 (41%), Gaps = 85/614 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +++   + +   +KE   K+++  K  D I++E P + + G +STN A  L+  L   P+
Sbjct: 1   MYSKLKTEINESIKEALTKLRI--KYDDEIILEEPPNPSMGDMSTNIAFSLASKLKKSPV 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA+ I   IK+    + V   G  +IN Y++ +     + + +    +    L  K  +
Sbjct: 59  EIAQEIKENIKLPLYFEKVETKGP-YINFYINYTLFTTKVVNYI---DKNYGELPEKDER 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           + +E  SANP GP+HVGH R A++GD+L  ++  +GY+V  +YY+ND G QI  +   + 
Sbjct: 115 ILLEHTSANPNGPLHVGHLRNAILGDSLKRILQHAGYKVEAQYYVNDMGRQIAIIVWGMD 174

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--V 238
            F          D  + E YY          E   +    L  + E     ++  +   V
Sbjct: 175 KFNYTVDDDKKADHAIGEVYYKCNQQLEANPEYNQEIDDILRKYEEGTDAALIDAFQGVV 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  I++ LK LNI+ ++F  E  F R     + D+++ L                  
Sbjct: 235 EYCIDGIKETLKDLNIKMNLFKWESTFLRN--GSVDDVLEKL------------------ 274

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            Q   + +  L         D +  L +S+G+  Y   DLAY + K  +  D  + ++G+
Sbjct: 275 -QPFTIQKDILYLPLERYNVDKELVLRRSNGTSLYATRDLAYHQYK-TKNSDISLDILGA 332

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH    K+L       + +     V+  E + L        MS R G FI++   +++  
Sbjct: 333 DHKLAAKQLGLALELSNNRAP--EVVFYEFIDLPEG----SMSTRKGVFISVDEFIEQSV 386

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  S+RF +      + + F + +     +    
Sbjct: 387 EHAKEELIRRDLDLTEKQIEEVSKIVGVGSIRFYINQISPEKPITFKWEEALSFERG--C 444

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+AR   +  ++         D      +  + E D  E  LI  L+++  VI  
Sbjct: 445 ASIQYAHARACKLLAKS---------DYNEFEEVRCDYELDDEEKDLIKTLSQFTEVICQ 495

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +   +  + LA Y   L+  F+  +   +       + + + KL   RL+LV A    + 
Sbjct: 496 SAQERRVHHLAQYTLSLSKAFNKFYKSKQ------VIGSEHEKL---RLKLVDASRITLK 546

Query: 572 SGLNIIGVESPNEM 585
           + L ++G++SP  M
Sbjct: 547 NSLKLLGIKSPEFM 560


>gi|218131430|ref|ZP_03460234.1| hypothetical protein BACEGG_03048 [Bacteroides eggerthii DSM 20697]
 gi|217986362|gb|EEC52699.1| hypothetical protein BACEGG_03048 [Bacteroides eggerthii DSM 20697]
          Length = 605

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 122/631 (19%), Positives = 240/631 (38%), Gaps = 72/631 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L   +      +  +     ++ +++ +    GHL T       R     
Sbjct: 1   MNI----EQKLVASVIGGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    S F   KGF+NL ++ S   ++L+ I         +   K 
Sbjct: 56  PEQTAQEIGEYLQANEPSVSTFNVIKGFLNLTIASSAWIELLNGIHADAQYGVVSATDKS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIIAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYS 237
            + +Y        S     +  G Y     K    +    +  F  E   +     K  S
Sbjct: 176 -WLKYGNGETPETSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQGEGLSEEEAKAKAES 234

Query: 238 VQAMMKIIRDDLKAL------------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
              +MK  R+ L                +   +++  D+ +R     +    D +  +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYVGFDETYRM----MGVTFDKIYYESE 290

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCK 344
            Y            +     ++     + + G+ +D + LL++DG+  Y   D+   K +
Sbjct: 291 TYLEGKEKVMEGLEKGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLR 350

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           + +   D MIYV+G++ + + + L  +   +     +  V     +    +G   KM  R
Sbjct: 351 FADFPIDKMIYVVGNEQNYHFQVLSILLDKLGFDWGKGLVHFSYGMVELPEG---KMKSR 407

Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434
            G  +    ++ E                             VG  ++++ +L     + 
Sbjct: 408 EGTVVDADDLMAEMINTAKETSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKN 467

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F+  K       N   ++QY YAR +S+ R+AK+    +         +P   E    
Sbjct: 468 MTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGITV------PAQLPLGIELSEK 520

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  LI  +A++  V++ A     P  +A Y YDL   ++  +           ++  N  
Sbjct: 521 EEGLIQMIADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEA 574

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 575 VKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|317476441|ref|ZP_07935690.1| arginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907467|gb|EFV29172.1| arginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 605

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 122/631 (19%), Positives = 240/631 (38%), Gaps = 72/631 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L   +      +  +     ++ +++ +    GHL T       R     
Sbjct: 1   MNI----EQKLVASVIGGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    S F   KGF+NL ++ S   ++L+ I         +   K 
Sbjct: 56  PEQTAQEIGEYLQANEPSVSTFNVIKGFLNLTIASSAWIELLNGIHADAQYGVVSATDKS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIIAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYS 237
            + +Y        S     +  G Y     K    +    +  F  E   +     K  S
Sbjct: 176 -WLKYGNGETPETSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQGEGLSEEEAKAKAES 234

Query: 238 VQAMMKIIRDDLKAL------------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
              +MK  R+ L                +   +++  D+ +R     +    D +  +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYVGFDETYRM----MGVTFDKIYYESE 290

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCK 344
            Y            +     ++     + + G+ +D + LL++DG+  Y   D+   K +
Sbjct: 291 TYLEGKEKVMEGLEKGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLR 350

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           + +   D MIYV+G++ + + + L  +   +     +  V     +    +G   KM  R
Sbjct: 351 FADFPIDKMIYVVGNEQNYHFQVLSILLDKLGFDWGKGLVHFSYGMVELPEG---KMKSR 407

Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434
            G  +    ++ E                             VG  ++++ +L     + 
Sbjct: 408 EGTVVDADDLMAEMINTAKETSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKN 467

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F+  K       N   ++QY YAR +S+ R+AK+    +         +P   E    
Sbjct: 468 MTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGITV------PAQLPSGIELSEK 520

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  LI  +A++  V++ A     P  +A Y YDL   ++  +           ++  N  
Sbjct: 521 EEGLIQMIADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEA 574

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 575 VKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|315185760|gb|EFU19526.1| arginyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 587

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 121/615 (19%), Positives = 240/615 (39%), Gaps = 80/615 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            R++  L ++  +  +   +LD + +  +RP     G ++       ++     P  IAE
Sbjct: 15  ERIRTVLLDLAREKGL---LLDEVGLVAQRPPSSQFGDVAFPL-FGFAKVFRTAPQKIAE 70

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNI 125
            +VAR+  +  V  +  AG G++NL+L        +LS I  +G  YG   + +  ++ +
Sbjct: 71  EVVARLLPEGAVRKIEGAG-GYVNLFLDREAFALSVLSDIAHAGPGYGAGTLHQDKRIMV 129

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF   N   P+H+GH R  ++G++++ ++A  G +V +   IND G  I    L+     
Sbjct: 130 EFSCPNTNKPLHLGHMRNNILGESVSRILASQGADVLKVNLINDRGIHICKSMLAYKKFG 189

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPI--VKDYSVQ 239
           +          P+ +    Y+K          A++ +  +L   E+    +  + +   +
Sbjct: 190 EGKTPEEVGKKPDHFVGDFYVKFNEWAKTDSTAEEQARRMLRAWEDGDAEVRALWEKMNR 249

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++ I    +   I  D    E D +       RD++      G  Y+           
Sbjct: 250 WAIEGIEQTYRRTGISFDKIYYESDTYLLG----RDLVLKGLEDGVFYQ----------- 294

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
                +   +    + +G D  + LL+SDG+  Y   DL     +Y +  FD +IYV+ S
Sbjct: 295 ----EEDGSVWVDLSEIGLDK-KVLLRSDGTSLYLTQDLGTAVARYQDWAFDLLIYVVAS 349

Query: 359 DHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
           + + + + L  V   +    A+ +  L   +V L       KM  R G  +    ++D  
Sbjct: 350 EQNYHFRVLFYVLEKLGFSWAKNLYHLSYGMVNLPEG----KMKSREGTVVDADDLLDRL 405

Query: 416 -------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     +   ++ + +L    ++ + F+  +    +  N 
Sbjct: 406 VEMAREEIREKGRVDEVEDIDRTAEAIALGALHYFLLQVSPNKDMIFNPKESLSLT-GNT 464

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QY  AR  S+ R+A            P   +P     D +  +LIV L+++P V+E
Sbjct: 465 GPYLQYMGARICSMERKADPSLG------VPVEEVPTAELVDDASWELIVLLSQFPEVVE 518

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P  +  +LY+L   F   +           +   N+     RL L   +  ++
Sbjct: 519 SAAREYNPSLVIGFLYELGKTFSSFYHDN------PIITHPNKDTARARLALARGIRQVL 572

Query: 571 NSGLNIIGVESPNEM 585
            +G  ++ +    +M
Sbjct: 573 ENGFRLVNIPFLEKM 587


>gi|90075828|dbj|BAE87594.1| unnamed protein product [Macaca fascicularis]
          Length = 631

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 124/620 (20%), Positives = 240/620 (38%), Gaps = 103/620 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 75  NINSRLQEVFGHA-IKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--AVGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVG                             D G Q   L   
Sbjct: 192 KKVIVDFSSPNIAKEMHVG-----------------------------DWGTQFGMLIAH 222

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 223 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AW 279

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    D+ + E    F++     + DI+     +G+V          
Sbjct: 280 KLICDVSRQEFNKIYDALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD------- 329

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 330 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 378

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + S  S + + + A A  +     ++  +      +       K   RAG+ + L  ++ 
Sbjct: 379 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMG 438

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             +    +++  L         F F K+ +  
Sbjct: 439 EGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-D 497

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEY 505
           + N   Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +
Sbjct: 498 RGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRF 552

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +++        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A
Sbjct: 553 PEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEA 611

Query: 566 VASIINSGLNIIGVESPNEM 585
           VA+++  G +I+G++    M
Sbjct: 612 VAAVMAKGFDILGIKPVQRM 631


>gi|251799320|ref|YP_003014051.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546946|gb|ACT03965.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 564

 Score =  360 bits (923), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 127/608 (20%), Positives = 223/608 (36%), Gaps = 78/608 (12%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           LK  +     +           ++E P +   G ++      LS+ +   P  IA  +  
Sbjct: 2   LKEMIAASLAEHCSLSSQQIEELLEFPPNEQLGDVAF-PCFALSKLMKQSPAQIAGQLAV 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +        + +AG  ++N   + + +   +   V +G       IG G +V I+  S 
Sbjct: 61  SLAESSRWT-ISVAGP-YLNFKFNRAAV---IEQFVRNGGAQT-PEIGGGKRVIIDMSSP 114

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N   P  +GH R  ++G+ L +L+   GY+     ++ D G Q   +  +       A  
Sbjct: 115 NIAKPFGIGHLRSTMIGNALYNLLRKVGYDTVNVNHLGDWGTQFGKMITAYLKWGDPAGK 174

Query: 191 NNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFP--EEKWLPIVKDYSVQAMMK 243
             D   P   Y  +Y++         EL  +     +     + +     + +   ++  
Sbjct: 175 AED---PIKAYLELYVRFHEEAVLQPELETEAREWFVKLESGDTEANRYWRMFIEDSLAA 231

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             +     L +  D ++ E  ++      +  +++ L RQG + E       S       
Sbjct: 232 FNKL-YDRLGVSFDHYLGESFYN----DKMDAVVEQLTRQGLLEE-------SDGALVVR 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSG 362
           +D + L              + KSDGS  Y   DLA    ++++   + ++YV+G++ S 
Sbjct: 280 LDEEAL----------PPCIIKKSDGSSIYATRDLATAIYRHDQMLGNELLYVVGAEQSL 329

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           + ++L  V   +    A     +   + L       KMS R G  + L  V+DE      
Sbjct: 330 HFRQLFLVLGRMGFDWATECKHIPFGLMLMDG---QKMSTRRGKVVFLEDVLDEAAAHAL 386

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              VG  +V F  L       ++F    V     E    YVQY 
Sbjct: 387 RIIEDKNPNLAGKAEVAEAVGVGAVIFGDLLHSRLHEVNFSLEDVVNFEGE-TGPYVQYT 445

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           YAR +S+ R+A       + D        Q +E D S  QL   L  YP  +  A    E
Sbjct: 446 YARTQSLLRKAGSDG-HAESDQHADAADYQYAEGDQS-WQLAKTLMRYPAALSQAAQRYE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P   A YL +LA  F+  + H +       +   N      +L LV   A  +  GL ++
Sbjct: 504 PSVAARYLIELAQTFNRFYHHEK-------IITGNPSEQAAKLTLVRMTAETLEDGLRLL 556

Query: 578 GVESPNEM 585
           GV++  EM
Sbjct: 557 GVKALKEM 564


>gi|291519091|emb|CBK74312.1| arginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 586

 Score =  360 bits (923), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 120/623 (19%), Positives = 239/623 (38%), Gaps = 84/623 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++K  +         ++K     +  RP  C       N A+  ++     P+ IA 
Sbjct: 4   ILQQIKEEVVAGFKACGYDEKYGMVSLSNRPDLCQ---FQCNGALAAAKEYKKAPIAIAG 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  ++  +           GFIN+ LS  ++   +S++      +G + +    KV I+
Sbjct: 61  EVAEKLASNSMFSKCEACPPGFINMNLSDQFIVDFVSTMADDKERFGVDKVSSPKKVMID 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++     F G EV  + ++ D G Q+  +   +  R  
Sbjct: 121 YGGPNVAKPLHVGHLRSAIIGESIKRTARFMGDEVIGDVHLGDWGLQMGLIITELKLRQP 180

Query: 187 QALYNN---DSDLP----------EGYYP---GVYLKHVGKELADKYSSELLNFPEEKWL 230
             +Y +   D + P          E  YP   G   +    + A   ++  L    + + 
Sbjct: 181 DLVYFDESYDGEYPTEPPFTITELEEIYPCASGKSKEDAAYKEAAMTATYELQHGRKGYQ 240

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            ++  + +   +  ++ + + L++  D++  E D        I D++  +   G+ Y   
Sbjct: 241 ALLS-HILNVSVNDLKRNYEKLDVDFDLWKGESDAQPY----IPDMVQKMKDDGFAY--- 292

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349
                S+     D+  +      T   +     +LKSDG+  Y   DLA    +  +   
Sbjct: 293 ----ISEGALVVDVKEE------TDTKEVPPCMILKSDGASLYNTTDLATMVWRMKDYNP 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFI 408
           D++IYV+      Y  ++   A       A  N+       +  +DG P K   R G  +
Sbjct: 343 DSIIYVVDKRQELYFTQVFRCAKKTGIVPADKNLYFVGFGTMNGKDGKPFK--TRQGGVM 400

Query: 409 TLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            L +++ E                          VG  +V++  L  + S+   FD  + 
Sbjct: 401 RLEYLLQEVEEKMLEKIRENGTMDEEEAEKTAQIVGLSAVKYGDLSNQASKDYIFDIDRF 460

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+ Y   RC+SI  +A           F   ++P  SE   SE  L + L
Sbjct: 461 TSA-EGNTGPYILYTIVRCKSILTKAG-------VSSFNGAILPAHSE---SERGLQLEL 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++   + +A     P+K+  Y+YDLA+ F+  +         + +   +  +    L+L
Sbjct: 510 TKFMAALTSAYEEMAPHKICAYIYDLANAFNRFYHD------TKILAEEDEAVKASYLKL 563

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           +     ++   ++++G  +P  M
Sbjct: 564 LWLTRGVLEKAIDLLGFNAPERM 586


>gi|15219682|ref|NP_176826.1| arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative
           [Arabidopsis thaliana]
 gi|12322268|gb|AAG51163.1|AC074025_13 arginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|14030685|gb|AAK53017.1|AF375433_1 At1g66530/F28G11_14 [Arabidopsis thaliana]
 gi|20334712|gb|AAM16217.1| At1g66530/F28G11_14 [Arabidopsis thaliana]
 gi|332196400|gb|AEE34521.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score =  359 bits (922), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 121/612 (19%), Positives = 229/612 (37%), Gaps = 85/612 (13%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD------PLTIAE 66
             L ++  K+ V  +     +IE  +    G    N AM L   +         P  + +
Sbjct: 19  AKLFDVSLKLTVPDEPNVEPLIEPGK---FGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQ 75

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V+S  IAG GF+N+ LS  ++ K + +++V GI+     +    +  ++
Sbjct: 76  ALIQSLPTSEMVESCSIAGPGFVNVVLSSKWMAKSIENMLVDGIDTWAPTL-SVKRAVVD 134

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   +F ++ 
Sbjct: 135 FSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFP 194

Query: 187 QALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                 +    DL   Y        +  E  +K    ++    +   P+ +  +   + +
Sbjct: 195 DTESVTETAIGDLQVFYRESKLKFDLNPEFKEKAQQAVVRL--QGGDPVYRQ-AWAKICE 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           I R++   +  +  I + E      +P  I ++I+ L+ +G V E               
Sbjct: 252 ISRNEFAKVYKRLRIELEEKGESFYNPY-IANVIEELSSKGLVEES-------------- 296

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
               +++F   + G  +   ++KSDG + Y + DL     +  E   + +IYV       
Sbjct: 297 -KGARVIF---IEGFKIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQ 352

Query: 363 YVKRLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
           +       A               +      L       +   RA + + L  ++DE   
Sbjct: 353 HFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDNKRFRTRAAEVVRLADLLDEAKD 412

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  ++++  L         F F ++    K + 
Sbjct: 413 RSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTNRITGYTFSFDQMLN-DKGDT 471

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YA+AR  SI R++         D+       + +    +E  L +HL ++   +E
Sbjct: 472 AVYLLYAHARICSIIRKSG-------KDIDELKKTGKIALDHAAERALGLHLLQFAETVE 524

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P  L  YLY L+  F   +S+ +       V  +  +    RL L  A A ++
Sbjct: 525 EACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-------VNGSAEE--TSRLLLCEATAIVM 575

Query: 571 NSGLNIIGVESP 582
               +++G+   
Sbjct: 576 RKCFHLLGITPV 587


>gi|290890411|ref|ZP_06553486.1| hypothetical protein AWRIB429_0876 [Oenococcus oeni AWRIB429]
 gi|290479807|gb|EFD88456.1| hypothetical protein AWRIB429_0876 [Oenococcus oeni AWRIB429]
          Length = 566

 Score =  359 bits (922), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 247/617 (40%), Gaps = 83/617 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      + ++   L+      K+EK      ++E+P+D   G  +      L+      
Sbjct: 1   MNFTHIIAEKINQTLENTFDLDKLEK------LVEKPKDLNRGDYAFP-TFSLAAKFHEA 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  I   I    +  +V   G  ++N ++        L   ++   ++GRN  G G
Sbjct: 54  PQKIALKIADEIDR-TNFANVKAVGP-YVNFFIQRVEFTNQLLKEILLNDDFGRNNQGAG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ I+  S N   PM +GH R  V+G+ ++ +   +GY+  +  ++ D G Q   +  +
Sbjct: 112 KKIVIDMSSPNIAKPMSMGHLRSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YS 237
                   L N +   P      +Y+K       +  + + L      W   ++D    +
Sbjct: 172 YKLWGDDKLINKN---PVDELVKLYVK----INKESETDKSLKDSGRAWFKKLEDGDPEA 224

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPP 294
           V+         LK     +D      D   G+      +  ++  LA +G + E      
Sbjct: 225 VKLWNWFKSVSLKEFQEVYDRLGVSFDSMNGEAFYNDKMEPVVKMLASKGLLTE------ 278

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
            S+  +  D+     L         +   + +SDG+  Y   DLA    +++   F   +
Sbjct: 279 -SQGAEIVDLPN---LLPKDNYPIAM---IKRSDGATQYITRDLASAIYRHDAYDFAKSL 331

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----- 408
           YV+G++   +  +++A+     +  A  ++       +  +G   KMS R G+ +     
Sbjct: 332 YVVGAEQKDHFDQMKAILKLAGDDWAD-DIEHIGFGMITMNGK--KMSTRKGNIVPLVDV 388

Query: 409 --------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                  HV +EVG+ +V F  L +  +  +DF+  K+  Q + 
Sbjct: 389 LDTARQLAAEQISEKNPGLENADHVAEEVGAGAVVFNDLQKDRNLSIDFNLEKIV-QFEG 447

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +   YVQY +AR  SI R++               +    +  D     ++  L+ YP +
Sbjct: 448 DTGPYVQYTHARAMSILRKSGQQAI----------LNTGVTFVDEEAWPIVSRLSAYPEM 497

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+ A   +EP  +A YL  LA  F+ +++H +       +  NN K    RL LV  V S
Sbjct: 498 IKRAWQLREPSIVAKYLLSLARDFNSYYAHTK-------ILVNNEK-MQSRLSLVQGVCS 549

Query: 569 IINSGLNIIGVESPNEM 585
           ++ SGLN++GV +PN+M
Sbjct: 550 VLKSGLNLLGVSAPNQM 566


>gi|229917757|ref|YP_002886403.1| arginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511646|sp|C4L0Z5|SYR_EXISA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|229469186|gb|ACQ70958.1| arginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 560

 Score =  359 bits (922), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 128/605 (21%), Positives = 225/605 (37%), Gaps = 87/605 (14%)

Query: 16  KEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
            E   ++  E+  +D+I  +IE+P+  AHG L+      L++     P+ IA  I   + 
Sbjct: 8   AEALSRVIGEELTIDQIEALIEKPKHEAHGDLAFP-CFQLAKAYRKAPVMIATDIANELN 66

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
            D     V  AG  ++N++LS   + K + + V+           +   +  +F S N  
Sbjct: 67  -DELFTKVEAAGP-YVNVFLSRDVVSKEIINTVLEEKSEYATHEARNETIVTDFSSPNIA 124

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNN 192
            P  +GH R  V+G+ +  +   +GY+V    ++ D G Q   L ++   W  ++A+  N
Sbjct: 125 KPFSMGHLRSTVIGNAINQIARKNGYDVVGVNHLGDWGTQFGKLMVAYKKWGDEEAVRAN 184

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDL 249
                        LK       +  +   L      W   ++D    + +       + L
Sbjct: 185 PI--------AELLKLYVHFHEEAKTQPELEDEGRAWFKKLEDGDAEATELWQWFRDESL 236

Query: 250 KALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           K     +D+   + +   G+      +  +++ L  +  + E       S+      ++ 
Sbjct: 237 KEFQKVYDLLGVKFESFNGEAFYNDKMGRVVEMLEAKNLLVE-------SEGAMVVSLEE 289

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
           + L              + K DG+  Y   DLA    +YE   F    YV+G + + + K
Sbjct: 290 ENL----------PPCLIKKKDGATLYATRDLAAAIYRYETYNFVQANYVVGGEQALHFK 339

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +L +V   +          +   + L       KMS R G  + L  V+ E         
Sbjct: 340 QLFSVLRKLGYDFVDGMHHVPFGLILQEGK---KMSTRKGRIVLLEEVLKEAIEKAQANI 396

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           VG  +V F  L  +    ++FD   + +   E    YVQY  AR
Sbjct: 397 EQKNPDLANAQDVARMVGVGAVVFHDLKNERINNIEFDLDSMLKFEGE-TGPYVQYTNAR 455

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             S+ R+                  P     D     ++  L  +P VI  A   +EP  
Sbjct: 456 ANSLLRKGNYDGS------------PFTGADDDYSWGVVTMLNAFPHVITRAHERREPSI 503

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           ++ Y+ DLA  F+ ++ H R                  RL LV AV  ++  GL ++GVE
Sbjct: 504 ISRYVLDLAQAFNKYYGHVRVL--------EEDAGKQSRLALVKAVTLVLTEGLRLLGVE 555

Query: 581 SPNEM 585
           +P EM
Sbjct: 556 APEEM 560


>gi|62184813|ref|YP_219598.1| arginyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313008|sp|Q5L6U4|SYR_CHLAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|62147880|emb|CAH63627.1| putative arginyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 562

 Score =  359 bits (922), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 135/615 (21%), Positives = 229/615 (37%), Gaps = 85/615 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L +  SS  +  +     +I+          I +      GH   N AM L+R L + 
Sbjct: 1   MTLLSYLSSLCREAILSAFPQIETISPD-----ITQSTKELFGHYQCNDAMKLARTLKMP 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV +I  + +  S+ IAG GFIN   S  +L   L S         R  +   
Sbjct: 56  PRAIAESIVKQISKN-NFSSIEIAGAGFINFTFSKEFLNLSLQSYSRDLSSGFR--VQDP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV I+F S N    MHVGH R  ++GD LA +  F G++V R  +I D G     L   
Sbjct: 113 KKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNHIGDWGTAFGMLIT- 171

Query: 181 VFWRYQQALYNNDSDLPEG---YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
               Y Q   + D +  E     Y   +++        K S   +   +       K + 
Sbjct: 172 ----YLQEESSEDIESLEDLTILYKKAHVRFAEDAEFKKRSQTNVVALQSGDPKARKLW- 226

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + + +I     + +    DI I +      +P  + +II++L ++  +           
Sbjct: 227 -ERICEISERAFQKIYNILDIQIEKRGESFYNP-FLPEIIEDLEKKNLI----------- 273

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
                  D  + +F     G  +   + K DG Y Y   DLA  + + E+   D +I V 
Sbjct: 274 ----TVSDEAKCVF---HEGFSIPLMVQKRDGGYNYATTDLAAMRYRVEQDHADRIIIVT 326

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD- 415
               S + + LEA A A      + +V       L  D    K   R+G+ I L+ ++D 
Sbjct: 327 DMGQSLHFQLLEATALAAGYLPNK-DVFSHVGFGLVLDSEGKKFKTRSGENIKLQELLDT 385

Query: 416 --------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      +G +++++  L         F F K+  + + N
Sbjct: 386 AIDQAVATLKKHRPEMSDAEITERAPVLGMNAIKYADLSSHRVSDYVFSFEKML-RFEGN 444

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              ++ Y Y R + I R+           +   ++    +  + SE  L + L  +P  I
Sbjct: 445 TAMFILYGYVRIQGIKRRLG---------IEKLSLESAANIQEPSEEALALALLRFPEAI 495

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +       P+ L  YLY L + FH  +                      RL L   V   
Sbjct: 496 DITLKELCPHFLTDYLYMLTNKFHAFFRDCHI---------EGSPHQKERLYLCALVEKT 546

Query: 570 INSGLNIIGVESPNE 584
           + +G++++G+++ + 
Sbjct: 547 LATGMHLLGLQTLDR 561


>gi|168014459|ref|XP_001759769.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688899|gb|EDQ75273.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 606

 Score =  359 bits (921), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 120/622 (19%), Positives = 223/622 (35%), Gaps = 93/622 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLGLD----- 60
              ++ N ++E       + + ++   +    +  +G    N AM + S+  G +     
Sbjct: 29  VRQQVVNLVREALATTVPDVEDIE-PQVAVCGNPKNGDYQCNNAMGIWSKIKGKNTSFKN 87

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I +     +      DSV +AG GF+N+ LS  ++ K L  ++  G+      +   
Sbjct: 88  PNAIGQAW--SLPRSSLTDSVSVAGPGFVNIKLSDRWIEKKLHQLLSHGVGEWAPAL-SY 144

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V ++F S N    MHVGH R  ++GD+L  ++ + G EV R  ++ D G Q   L   
Sbjct: 145 KRVVVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEYCGVEVLRRNHVGDWGTQFGMLIEY 204

Query: 181 VFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLPIVKD 235
           +F  +       D    DL + Y        V     +K      LL     ++      
Sbjct: 205 LFEEFPNWEEIGDQAVGDLQDFYKKAKIKFDVDAAFKEKAQKAVVLLQGGNPQYRAAWAK 264

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  K      K L +  +    E  ++   P     +++ L  +G V         
Sbjct: 265 I-CDVSRKSFDQVYKRLKVTLEEK-GESAYNEYIPG----VVEELKGKGLV--------- 309

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIY 354
                  +      + + +  G  +   L+KSDG + Y + D+ A +    E   + M+Y
Sbjct: 310 -------EDSEGAKVIKVS--GQTIPLILVKSDGGFNYASTDMTAMWYRLNEEKAEVMVY 360

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMSKRAGDFIT 409
           V     S +   +   A          +       +   + L  DG   +   R+ + + 
Sbjct: 361 VTDVGQSQHFDMVFKAAKRAGWLPEDESQLPRARHVGFGLVLGADGK--RFRTRSTEVVR 418

Query: 410 LRHVVDEV-----------------------------GSDSVRFMMLWRKNSELLDFDFC 440
           L  ++DE                              G  ++++  L         F+F 
Sbjct: 419 LVDLLDEAKDRSKQGLVERGNFSEWSAEELEEAAEALGYGAIKYADLKNNRLTNYTFNFD 478

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++ +  + N   Y+ YA+AR  SI R+++    +L           Q      SE  L +
Sbjct: 479 QMLD-IRGNTAVYLLYAHARICSIIRKSEKNVEEL-------KKTGQMKLQHPSERALGL 530

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            L  +   +E+A     P  L  YLY L+ +F   +++       + V +        RL
Sbjct: 531 QLIRFGEFVEDAASDLLPNVLCEYLYTLSGMFTDFYTNC------KVVGSEEE---TSRL 581

Query: 561 QLVHAVASIINSGLNIIGVESP 582
            L  A A I+     ++G+E  
Sbjct: 582 LLCEATAVIMRECFKLLGIEPL 603


>gi|256394710|ref|YP_003116274.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360936|gb|ACU74433.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 619

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 129/656 (19%), Positives = 235/656 (35%), Gaps = 120/656 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  L + ++     +  +       +I RP D  H     N  + L++ +  +P  +A 
Sbjct: 5   LSEILADDVRAALTAVLGDAARGADPLI-RPSD--HADFQANGVLPLAKAVKGNPRELAM 61

Query: 67  LIVARIK-----------------------------------IDPDVDSVFIAGKGFINL 91
            + A +                                        + +V +AG GF+NL
Sbjct: 62  RVAAVLVGSAGSVGSEGAPDSAGAGVSAEGETEGGEGTEPVVTSGVIAAVDVAGPGFLNL 121

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L+ + L    +  +      G    G G    I++   N    MHVGH R  V+GD L 
Sbjct: 122 TLTDAALAAQAAERLGD-PRLGVAPTGVGRTAVIDYSQPNIAKEMHVGHLRSTVIGDALV 180

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGVYL--- 206
            L+ F G  V R+ ++ D G Q   L   +    +    + +   ++   +   +Y    
Sbjct: 181 RLLEFDGRTVVRQNHLGDWGTQFGMLIQYLVEHPEARPADAEHSGEVAISWLTALYRDAR 240

Query: 207 --KHVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--DIFI 260
                  E AD+    +  L   +E+ L   ++  V    +   D    L+++      +
Sbjct: 241 AHFESDAEFADRARKRVVTLQGGDEESLEAWRE-MVAESKRYFEDVYGRLDVRLVDADAV 299

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  ++      + ++  +L  +G                    +    +F   + G D 
Sbjct: 300 GESFYNPY----LAEVAADLEERGIA---------------VWSEGALCVFFDDIKGPDG 340

Query: 321 DRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           D     + KSDG Y Y A DLA  + +      D ++YV+ S  + + + +   A     
Sbjct: 341 DPVPLMVRKSDGGYGYAATDLAAVRYRVNTLKADEILYVVDSRQALHFRMVFETARRAGY 400

Query: 377 KKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
               +  +  +    L  DG P K   RAG  I L  ++D                    
Sbjct: 401 LPEGVEAVHVQFGSVLGTDGKPFK--TRAGKTIRLIELLDSAVDHAVATVEEKNPDLAAA 458

Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   VG  +V++  L    ++   FD  ++      N   Y+QYA+AR  SI R+ 
Sbjct: 459 DARTEAKLVGIGAVKYADLSTSRTKDYIFDLDRMVSL-HGNTSVYLQYAHARIHSILRKL 517

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               P           I  +   + +E +L +HL ++   +   T   EP++LA YLY L
Sbjct: 518 PPGTPAR---------IHTDLVLEPAERKLALHLDDFGATLATVTENFEPHRLATYLYAL 568

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A  F   + +         ++A    +   R  LV      + +GL ++G+ +P++
Sbjct: 569 AQTFSDFYENC------PVLKAPTDAVRENRAALVQLTGETLKAGLALLGISAPDQ 618


>gi|296110389|ref|YP_003620770.1| arginine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831920|gb|ADG39801.1| arginine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 563

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 137/611 (22%), Positives = 250/611 (40%), Gaps = 88/611 (14%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           R+ + L+++     +E+       +E P+    G ++      L++     P  IA  +V
Sbjct: 6   RVVSALQKVLPDFTLEQISEK---LEAPKSTDLGDVAF-PTFTLAKTRHQAPQQIAAALV 61

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             I  +   + V   G  +IN +L      +  L  I+     +G +  G G  V I+  
Sbjct: 62  TEIDQEG-FEKVVATGP-YINFFLDKQVTSRHTLEKILTEQANFGSHTTGNGANVTIDMS 119

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   PM +GH R  V+G+ LA++ A +GY   +  ++ D G Q   L       Y   
Sbjct: 120 SPNIAKPMSMGHLRSTVIGNALANITAKNGYVPVKINHLGDWGTQFGKLI------YAYK 173

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKY-SSELLNFPEEKWLPIVK--DYSVQAMMKII 245
            + N++++     P   L     E  +K    + LN     W   ++  D     + +  
Sbjct: 174 TWGNEAEVKAD--PIATLLRYYVEFHEKAQDDDSLNDEGRAWFKKLENGDQEAHKLWQWF 231

Query: 246 R-DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           R + LK     +D    E D   G+      +  ++D L+ +  +        KS+  Q 
Sbjct: 232 RAESLKEFTAIYDRLDIEFDSFNGEAFYNDKMDKVVDMLSDKKLL-------VKSQGAQI 284

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
            D+         + + D++   ++K SDG+  Y   DLA    + E   F   +YV+G +
Sbjct: 285 VDL---------SSINDNLTPAMIKRSDGATLYMTRDLAAAVYRKETYRFAKSLYVVGGE 335

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              +  +++AV + +    A  +V       +  +G   KMS R GD + L+ V+D+   
Sbjct: 336 QREHFVQMKAVLSLMGFDWAD-DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLDDAHD 392

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG+ +V F  L    +   DF+  +V  + + +   YV
Sbjct: 393 LALKQIQEKNPALKNKEVVAEQVGAGAVVFHDLMNDRTNNFDFNLEEVV-RFEGDTGPYV 451

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR +SI R+A       D +L   +              +I  L  +P  ++ A  
Sbjct: 452 QYTNARAKSILRKADVTKIGDDLNLNDADT-----------WDIITTLNAFPTAVQRAWQ 500

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            +E   +A Y   LA  F+ ++++ +       + A++ +L   RL LV +V  +++  L
Sbjct: 501 QREASIIAKYALTLARTFNKYYANSK-------ILADDAQL-NARLALVESVTIVLSESL 552

Query: 575 NIIGVESPNEM 585
            ++GV+SP EM
Sbjct: 553 RLLGVKSPEEM 563


>gi|15828714|ref|NP_326074.1| arginyl-tRNA synthetase (arginine--tRNA ligase) (ArgRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089656|emb|CAC13416.1| ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS) [Mycoplasma
           pulmonis]
          Length = 534

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 164/538 (30%), Positives = 280/538 (52%), Gaps = 41/538 (7%)

Query: 48  NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           N  MI+ +   L   T+ EL   + + +  ++   I   GF+NL+L+      ++  I+ 
Sbjct: 38  NILMIVQKKNKLSLETLQELFEDKFE-NEYIEKFEILNPGFLNLFLNDLAFESLVLEILN 96

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               YGR        +NIEFVSANPTG +H+GH R A  G  LA+ + FSGY VT+EYYI
Sbjct: 97  QNQNYGRLE-KNNQNINIEFVSANPTGFLHIGHVRNACYGQILANTLDFSGYNVTKEYYI 155

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
           NDAG+QI TLA S+++R ++ L N +   P+  Y G  + +  K+L +K++S++     E
Sbjct: 156 NDAGSQIETLAYSIYFRARELL-NLEVKAPQEMYRGNDIVYGAKQLIEKFTSQIFEKDYE 214

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +    +K+ S +  ++ I++ L  + +  DIF SE   +  + + I  I+  L    Y Y
Sbjct: 215 EIKEFLKEESTKIFLEKIKEHLNLIGVNFDIFFSEKSLY--EENKIEPILKALE--NYTY 270

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E                    L  +++  GDD DR L KSDGS TYF  D+AY   K++R
Sbjct: 271 E----------------KENALWLKTSHFGDDKDRVLRKSDGSLTYFTPDIAYHNIKHQR 314

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              ++I V G+DHSGY+KRL      +S++K ++  +  +LV+L ++   +KMSKR G  
Sbjct: 315 NNSSLINVWGADHSGYIKRLSIAYEMISKQKVKVETI--QLVKLTKNNQELKMSKRMGTS 372

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
            TL  + + VG D++RF M  R N+  L FD   + +   EN ++ ++Y YAR   +  +
Sbjct: 373 FTLIELYEIVGKDAIRFYMNSRSNNSALVFDIDAILKNDSENYIYTIKYTYARAFQLLLK 432

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A++   +L             S  +     LI  + E+P +I   + + + + L  YL D
Sbjct: 433 AQENSINLSKKASQ-------SYQNEFVKNLIKKMVEFPSLIVQISQSFKTHLLNQYLID 485

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L + F+  +S+      +  + ++ ++     +++V A   ++++  +IIG++   +M
Sbjct: 486 LVTTFNSFYSN------VSIIGSSQQE---ALIEVVKAFRILMSTIFDIIGIDKVEKM 534


>gi|116490937|ref|YP_810481.1| arginyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276881|sp|Q04FF6|SYR_OENOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116091662|gb|ABJ56816.1| arginyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 566

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/617 (21%), Positives = 247/617 (40%), Gaps = 83/617 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      + ++   L+      K+EK      ++E+P+D   G  +      LS      
Sbjct: 1   MNFTHIIAEKINQTLENTFDLDKLEK------LVEKPKDLNRGDYAFP-TFSLSAKFHEA 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  I   I    +  +V   G  ++N ++        L   ++   ++GRN  G G
Sbjct: 54  PQKIALKIADEIDR-TNFANVKAVGP-YVNFFIQRVEFTNQLLKEILLNDDFGRNNQGAG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ I+  S N   PM +GH R  V+G+ ++ +   +GY+  +  ++ D G Q   +  +
Sbjct: 112 KKIVIDMSSPNIAKPMSMGHLRSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YS 237
                   L N +   P      +Y+K       +  + + L      W   ++D    +
Sbjct: 172 YKLWGDDKLINKN---PVDELVKLYVK----INKESETDKSLKDSGRAWFKKLEDGDPEA 224

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPP 294
           V+         LK     +D      D   G+      +  ++  LA +G + E      
Sbjct: 225 VKLWNWFKSVSLKEFQEVYDRLGVSFDSMNGEAFYNDKMEPVVKMLASKGLLTE------ 278

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
            S+  +  D+     L         +   + +SDG+  Y   DLA    +++   F   +
Sbjct: 279 -SQGAEIVDLPN---LLPKDNYPIAM---IKRSDGATQYITRDLASAIYRHDAYDFAKSL 331

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----- 408
           YV+G++   +  +++A+     +  A  ++       +  +G   KMS R G+ +     
Sbjct: 332 YVVGAEQKDHFDQMKAILKLAGDDWAD-DIEHIGFGMITMNGK--KMSTRKGNIVPLVDV 388

Query: 409 --------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                  HV +EVG+ +V F  L +  +  +DF+  K+  Q + 
Sbjct: 389 LDTARQLAAEQISEKNPGLENADHVAEEVGAGAVVFNDLQKDRNLSIDFNLEKIV-QFEG 447

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +   YVQY +AR  SI R++               +    +  D     ++  L+ YP +
Sbjct: 448 DTGPYVQYTHARAMSILRKSGQQAI----------LNTGVTFVDEEAWPIVSRLSAYPEM 497

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I+ A   +EP  +A YL  LA  F+ +++H +       +  NN K    RL LV  V S
Sbjct: 498 IKRAWQLREPSIVAKYLLSLARDFNSYYAHTK-------ILVNNEK-MQSRLSLVQGVCS 549

Query: 569 IINSGLNIIGVESPNEM 585
           ++ SGLN++GV +PN+M
Sbjct: 550 VLKSGLNLLGVSAPNQM 566


>gi|241668933|ref|ZP_04756511.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877465|ref|ZP_05250175.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843486|gb|EET21900.1| arginyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 581

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 125/629 (19%), Positives = 243/629 (38%), Gaps = 92/629 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L +   +   K+   +     +   R      GH   N AM L++     
Sbjct: 1   MNI----ENHLSDIFAQAFEKLGYSQSFAKVVTSTR---EGVGHFQCNGAMPLAKFAKKA 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           PL IA+ I+ +I+ +     + +A  GFIN+ LS  +L       + S  ++G     K 
Sbjct: 54  PLVIAQEIIEQIENEDIFYKLEVAKPGFINISLSNKFLAATTDKFLNS-SKFGVQDNTKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F   N   PMHVGH R A++GD L  L  F    V  + ++ D G Q+  L   
Sbjct: 113 KKVVLDFGGPNVAKPMHVGHIRSALLGDALQRLHRFYNDNVISDVHLGDWGTQMGMLIEE 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLN------FPEEKWLP 231
           +       +Y +++      Y G Y K      +ELA+ Y              ++    
Sbjct: 173 IKLESPDLVYFDEN------YNGEYPKESPVTVQELAEIYPRASKRCKSDIIEMDKARQA 226

Query: 232 IVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +             + V+  ++ I+ D  +L++  D+++ E D ++     + ++I  
Sbjct: 227 TFELQQGRKGYVALWQHFVRISIEAIKKDFDSLDVHFDLWLGESDANK----FVDEMIAY 282

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                ++YE                D    +  +   G      ++K DG   Y   DLA
Sbjct: 283 FKTNKFIYE----------------DEGAWVIDTNKEGVP-PLIVIKKDGGVMYGTTDLA 325

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGM 396
               +  +   D +IYV+    S + K++ +VA    V  ++ ++  +    V   +DG 
Sbjct: 326 TLWQRAKDLNPDEIIYVVDKRQSLHFKQVFSVAKRTKVVSEECKLKHVAFGTVN-GKDGR 384

Query: 397 PIKMSKRAGDFITLRHVV--------------------DEVGSDSVRFMMLWRKNSELLD 436
           P K   R G  + L  ++                    +++   +++F  L    +    
Sbjct: 385 PFK--TREGGVMHLSDLISQAKNYAHKRMPDENDENITNQIAMATIKFGDLVNNYANDYI 442

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K   Q +     Y+ Y   R ++I R+      + D +   +     +++ +  E 
Sbjct: 443 FDLEKFA-QYEGKTGPYLLYTTVRAKAILRK--VFGDNYDINSLAKEYRITKAD-NEHEE 498

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L + L ++P  +  A    +P+ +  Y Y LA+ F+  + +         +  N+ +L 
Sbjct: 499 KLQLQLIQFPIAVSRAYENSQPHHICEYAYSLANSFNRFYVNC------PIMNLNDEQLK 552

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R+ L  A    +    +++G+  P  M
Sbjct: 553 KSRIALCMATVKAMTIATDLLGISIPERM 581


>gi|167757738|ref|ZP_02429865.1| hypothetical protein CLOSCI_00069 [Clostridium scindens ATCC 35704]
 gi|167664620|gb|EDS08750.1| hypothetical protein CLOSCI_00069 [Clostridium scindens ATCC 35704]
          Length = 588

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 123/628 (19%), Positives = 239/628 (38%), Gaps = 86/628 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  + + L E   K   E+      +  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIIDLVADELAEAFEKAGYERSYAKVTLSNRPDLCE---YQCNGAMAGAKAYKKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IAE +   +K    ++ V     GFIN+ L   Y+   L+ +     E G     +   +
Sbjct: 58  IAEAVAENLKDSRCIEEVNAVKPGFINMKLRNDYVAGFLNDMGADD-ELGVEKAKEPKMI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++   N   P+HVGH R A++G+++  +    G+EV  + ++ D G Q+  +   +  
Sbjct: 117 LVDYGGPNVAKPLHVGHLRSAIIGESIKRIARKMGHEVLGDIHLGDWGYQMGLIITELRE 176

Query: 184 RYQQALYNND---SDLP----------EGYYPGVYLKHVGKELADKYS--SELLNFPEEK 228
           R  Q  Y +D    + P          E  YP    K    E   + +  +  L     +
Sbjct: 177 RKPQLPYFDDNFQGEYPSEAPFTISELEEIYPTASQKAKEDETYREEALNATYLLQNGHR 236

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
               V ++ +   +  ++ +   LN++ D++  E D        I D+I+ L ++GY + 
Sbjct: 237 GYTAVWNHIMNISVADLKRNYANLNVEFDLWKGEADAQAY----IPDMIERLKKEGYAH- 291

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY 345
                          +D   L+       D  + P   + KSDG+  Y   DLA    + 
Sbjct: 292 ---------------IDEGALVIDVQEETDTKEVPPCMIQKSDGASLYGTTDLATLVQRE 336

Query: 346 -ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKR 403
            +   D +IYV+      +  ++   +        + ++  L       +DG P K   R
Sbjct: 337 ADYHPDKIIYVVDKRQELHFLQVFRASKKTGIVPEETHLRFLGFGTMNGKDGKPFK--TR 394

Query: 404 AGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDF 437
            G  + L +++ E                          VG  ++++  L  + S+   F
Sbjct: 395 EGGVMRLENLIAEIEEEMYKKIAENRTVAEDEAKETAKIVGMSAIKYGDLSNQASKDYVF 454

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D  +     + N   Y+ Y   R +SI  + +      +        +  ES  + SE  
Sbjct: 455 DVDRFTSF-EGNTGPYILYTIVRIKSILNKYQAQGKSFEG-------LAIESAHNESEKA 506

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L++ +A+Y  V+E A     P+K+  Y+YD+A+ F+  +         + +   N     
Sbjct: 507 LMLEVAKYNEVMETAYEELAPHKVCAYIYDVANAFNRFYH------ETKILSEENEARQK 560

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
             + L+     ++ + ++++G E+P  M
Sbjct: 561 SYIALLILAKKVLEACIDVLGFEAPERM 588


>gi|166031101|ref|ZP_02233930.1| hypothetical protein DORFOR_00786 [Dorea formicigenerans ATCC
           27755]
 gi|166028948|gb|EDR47705.1| hypothetical protein DORFOR_00786 [Dorea formicigenerans ATCC
           27755]
          Length = 588

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 114/587 (19%), Positives = 222/587 (37%), Gaps = 83/587 (14%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
              N AM  ++     P+ IA+ +VA+++       V     GFINL L   ++   L  
Sbjct: 39  YQCNGAMAGAKAYHKAPIMIAQDVVAKLEGSGCFCDVQAVNPGFINLKLDERFVADYLDE 98

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           +     + G N       + I++   N   P+HVGH R A++G+++  +    G+ V  +
Sbjct: 99  METD-EDLGLNKTDNPKMIVIDYGGPNVAKPLHVGHLRSAIIGESVKRISRKMGHNVLGD 157

Query: 165 YYINDAGAQINTLALSVFWRYQQ---------ALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            ++ D G Q+  +   +  R  +           Y  ++         +Y    GK   D
Sbjct: 158 IHLGDWGYQMGLIITELKERKPELPYFDENFKGEYPAEAPFTISELEEIYPTASGKAKED 217

Query: 216 KYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           +   E       L     K    + ++ +   +  ++ +   LN+  D++  E D     
Sbjct: 218 EEYRERALHATYLLQNGHKGYTAIWNHIMHVSVNDLKKNYANLNVDFDLWKGESDAQAY- 276

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLK 326
              I D+I+ L ++G+ +                +D   L+       D  + P   + K
Sbjct: 277 ---IPDMIERLKKEGFAH----------------VDDGALVIDVQEESDTKEIPPCMIQK 317

Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-L 384
           SDG+  Y   DLA    + E    D +IYV+      +  ++   A       ++  +  
Sbjct: 318 SDGASLYGTTDLATLVQRVEDYHPDKVIYVVDKRQELHFVQVFRAAKKTGIVPSETELKF 377

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------VG 418
           L       +DG P K   R G  + L +++ E                          VG
Sbjct: 378 LGFGTMNGKDGKPFK--TREGGVMRLENLIAEIQEEMYKKITDNRTVEEEEAKNTAKTVG 435

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++  L  + S+   FD  +     + N   Y+ Y   R +SI  + ++    +   
Sbjct: 436 MAAIKYGDLSNQASKDYVFDVDRFTSF-EGNTGPYILYTIVRIKSILNKYQEEGKAVTG- 493

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +    +   SE  L++ L +Y  ++ENA     P+K+  Y+YDLA+ F+  +  
Sbjct: 494 ------LKVNQQSGESEKALMLALVKYNEMMENAYEELAPHKICAYIYDLANAFNHFYH- 546

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + +   N       + L+     ++ S ++++G E+P  M
Sbjct: 547 -----ETKILAEENEAKKQGYIALLILTKKVLESCIDVLGFEAPERM 588


>gi|289641668|ref|ZP_06473828.1| arginyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508537|gb|EFD29476.1| arginyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 592

 Score =  358 bits (919), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 127/612 (20%), Positives = 233/612 (38%), Gaps = 74/612 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L   L      +  E ++   I     R         +AA+ L+R L  +P  IA 
Sbjct: 22  LERLLDERLGAAFTAVAGE-QVDPAI-----RRSQRADYQADAALSLARRLRRNPRDIAA 75

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V   ++D   ++V +AG GFINL+L+ S L ++L  +       G   + +   V ++
Sbjct: 76  EVVRAAELDDLCETVEVAGPGFINLHLAASALERLLGEVFGD-ERLGVAPVPEPEVVVVD 134

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           +   N    MHVGH R  ++GD    L+++ G++V R+ +I D G     L   +     
Sbjct: 135 YSGPNAAKEMHVGHLRSTIIGDAAVRLLSWLGHQVVRQNHIGDWGTPFGMLVEHLLDIGE 194

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +A +         +Y    +K    E   + S   +   +       + + V  ++   
Sbjct: 195 SEAAHELSVGDLNAFYRAARVKFDADEAFKERSRLRVVRLQAGDPTTRRLWHV--LVGES 252

Query: 246 RDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +     +  Q  + ++E DF RG+      +  ++D L   G +         S      
Sbjct: 253 KKYFLTVYSQLGVLLTEADF-RGESSYNDQLGPVVDELTELGLLR-------LSDGALCA 304

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHS 361
             +  +         + +   + K DG Y Y   DLA  + +  +     ++YV+G    
Sbjct: 305 FPEGFK-----NRDDEPLPLIVRKRDGGYGYATTDLATIRHRIRDLHATRLLYVVGLPQY 359

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM-SKRAGDFITLRHVVDE---- 416
            + + +  VA      +A +         +   G   KM   RAGD + L  ++++    
Sbjct: 360 QHFEMIYEVAREAGWLRAPVRAEHIGHGSIL--GADGKMLRTRAGDSVKLVALLEQAVSR 417

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  +G  +V++  L    S+   FD  ++      N   Y
Sbjct: 418 AADVIAVKNPGLDAQTRAQVAQAIGIGAVKYADLSTDRSKDYVFDLDRMLAFD-GNTAPY 476

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYA+AR  S+FR+A   +P    D+            +  E  L V L  +  V+E   
Sbjct: 477 LQYAHARICSVFRRAGLTYPVAAADI---------RIGEPEERHLAVQLLSFGDVVEGIV 527

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
            + E ++LA YL+ LA+ F   +      P LR        +   R+ L       + +G
Sbjct: 528 DSLEFHRLAGYLFSLATAFTNFYEKC---PILR----AEEPVRTSRVALCDLTRRALATG 580

Query: 574 LNIIGVESPNEM 585
           L ++G+ +P  M
Sbjct: 581 LGLLGITAPERM 592


>gi|259048230|ref|ZP_05738631.1| arginine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035291|gb|EEW36546.1| arginine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 563

 Score =  358 bits (919), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 147/610 (24%), Positives = 239/610 (39%), Gaps = 86/610 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + E   K   E   +D IV  IE P+    G L+   A  L++ L   P  IA  IV
Sbjct: 4   KKIVAEQIAKTVGEHFSVDEIVSMIEVPKYANQGDLAF-PAFTLAKVLRKAPQAIATEIV 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             +  D  +      G  + N +L  S    ++L  ++  G  YG    G+G KV I+  
Sbjct: 63  EAV-SDKHIARAEAMGP-YANFFLERSAFADEVLKEVLELGEHYGDWDYGQGRKVVIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   PM +GH R  V+G+ +A+L    GYE  R  ++ D G Q   L  +      + 
Sbjct: 121 SPNIAKPMSMGHLRSTVIGNAIANLEKKVGYEPIRINHLGDWGTQFGKLIEAYKLWGSEE 180

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIR 246
           L   D   P      +Y++       +      L+     W   ++D   +A  + +  R
Sbjct: 181 LVKAD---PIAELIKLYVRFH----EEAELDPTLDDKGRAWFKKLEDGDAEAVRLWEWFR 233

Query: 247 -DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + LK  N  +D+     D + G+      +  ++D L     +                
Sbjct: 234 SESLKEFNRVYDLLGVTFDSYNGEAFYNDKMDVVVDMLEDANLL-------KVDNGATIV 286

Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
           D+++            D+   L+ KSDG+  Y   DLA    +     F   IYV+G + 
Sbjct: 287 DLEKY-----------DLPPALIKKSDGATLYMTRDLAAANYRKNTYDFAKCIYVVGMEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S + K+L+AV   ++   A+  V +   +         K+S R G  I L  V+ E    
Sbjct: 336 SNHFKQLKAVLKELNLPWAETIVHIPFGLITLNGK---KLSTRKGKIILLEGVLKEATEL 392

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V F  L    +   DF   +V  Q +     YVQ
Sbjct: 393 ALKQIEAKNPSLENKEAVAHAVGVGAVIFHDLKNDRTNNFDFALEEVV-QFEGETGPYVQ 451

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y +AR  SI R+A              ++    S  D    +++  +  YP V+  A   
Sbjct: 452 YTHARAMSILRKANH----------TVDMTEAFSLTDDDAWEVLKLIENYPNVVRFAEEK 501

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y+ +LA  F+ +++H +       V   +      R+ LV   AS++  GL 
Sbjct: 502 CEPSAIAKYVINLAQAFNKYYAHTK-------VLVEDEAF-NSRIALVQTTASLLKQGLA 553

Query: 576 IIGVESPNEM 585
           ++GV +P+EM
Sbjct: 554 LLGVAAPDEM 563


>gi|291563033|emb|CBL41849.1| arginyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 588

 Score =  358 bits (919), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/626 (19%), Positives = 236/626 (37%), Gaps = 82/626 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  + + +K+       ++      +  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKILDIITDEMKKAFAANGYDENFAKVTLSNRPDLCE---YQCNGAMAAAKTYKKKPID 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V ++K     + V     GFINL L+P++L     + +    + G + + K   +
Sbjct: 58  IANGVVEQLKDSEVFEEVNAVMPGFINLKLNPAFLSGY-MNGMKGAKKLGMDEVEKPETI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++  AN   P+HVGH R AV+G+ L  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 VIDYGGANVAKPLHVGHLRSAVIGEALKRMGRFVGHKVIGDVHLGDWGLQMGLIIEELKD 176

Query: 184 RYQQ---------ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL---- 230
           R  +           Y  ++         +Y    GK   D+   E       K      
Sbjct: 177 RKPELPYFDESFTGEYPEEAPFTISELEEIYPAASGKSKVDEAFKERAQEATFKLQSGYA 236

Query: 231 --PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
               +  + +   +K ++ +   L++  D++  E D     P  I+D    L  +G  YE
Sbjct: 237 PYRAIWKHIMNVSLKDLKRNYANLDVDFDLWKGESDAQPYIPGLIKD----LQDKGLAYE 292

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER- 347
                  S+     D+         T   +     + KSDG+  Y  +DLA    + +  
Sbjct: 293 -------SQGALVVDIAE------PTDTKELPPCIVRKSDGAALYATSDLATIVEREQDF 339

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGD 406
             D+ IYV+      +  ++  VA       A   +       +  +DG P K   R G 
Sbjct: 340 KPDHYIYVVDKRQELHFTQVFRVAKKAGIVPADRKMDFVGFGTMNGKDGKPFK--TREGG 397

Query: 407 FITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLDFDFC 440
            + L +++                          + VG  ++++  L  + ++   FD  
Sbjct: 398 VMRLENLIADIDEAAYNRIMENRTVSEDEAKTTAEIVGLAALKYGDLSNQATKDYVFDID 457

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLI 499
           +     + N   YV Y  AR  SI ++  D   +  + ++ P +  P        E  L+
Sbjct: 458 RFTSF-EGNTGPYVLYTIARINSILKKYSDTCENTENGEILPPSAEP--------EKTLM 508

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ Y  V+        P+K+  Y+Y+L++  +  +         + +   ++K     
Sbjct: 509 LALSRYSDVMLTCFEELAPHKICAYIYELSNALNHFYH------ETKIIAEEDKKKQAGY 562

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + LV     ++ + +N++G  +P  M
Sbjct: 563 ISLVTLTRDVLMTCINVLGFSAPERM 588


>gi|322367961|ref|ZP_08042530.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551977|gb|EFW93622.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 583

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 150/629 (23%), Positives = 251/629 (39%), Gaps = 92/629 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F   +++ L      + +     D + IE P +     L+++AA  L+  +G  P 
Sbjct: 1   MFLTFREEVEDALLAALSALDLPT---DDLGIETPPEGVDAVLASSAAFRLAGEVGAPPP 57

Query: 63  TIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            IA  I   I  D         G+G ++N   S +Y  + + +      EYGR     G 
Sbjct: 58  KIAADIADEIDADGYDHLAAAVGQGPYVNFLPSDTYYDETVET--AQDEEYGRLEPT-GE 114

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E  SANPTGP+HVG  R  + GD +A ++ F+G +V R YY+NDAG QI     + 
Sbjct: 115 NVVVEHTSANPTGPVHVGRARNPITGDAIARILDFAGNDVDRHYYVNDAGRQIAVFTWAY 174

Query: 182 FWRYQQALYNNDSDLPE----GYYP--GVYLKHVGKELADKYS---SELLNFPEEKWLPI 232
               ++ L   + +  +     YY     YL+    E AD+     + +L   EE     
Sbjct: 175 ETFDEEDLPKPERERADYDLVRYYRKGNAYLEEADPEDADEAETKIAAILQGLEENDEET 234

Query: 233 VKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            +  S  V  ++  +R  L  L  + D F+ E  F         D++  L    +     
Sbjct: 235 YERVSEVVDTVLSGMRVTLDRLPAEFDEFVKETQF--MFDGSTDDVVSRLKEDEHAVY-- 290

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                         +        +  G + +   L+SDG+  Y   DLA+ + K +  +D
Sbjct: 291 --------------EEDAWQLDLSEFGFEKNLVFLRSDGTSLYTTRDLAHHEWKLD-NYD 335

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
             + V+G DH     +L      +     ++       V L   G    MS R G  I +
Sbjct: 336 RAVTVIGEDHKLQADQLAQALEILGNDTDKLTSFHYSWVNLPEGG----MSTREGTGIDM 391

Query: 411 RHVVDE---------------------------------VGSDSVRFMMLWRKNSELLDF 437
             ++DE                                 VG  +VR+ ++ ++ ++ + F
Sbjct: 392 DDLLDEAEKRAREEVESRMDDRIRDDDLTEADVDRIARQVGIGAVRYDIISKQPTKTITF 451

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           ++ +  +   ++   YVQY +ARC  I  +   +I  D+D  L              SE 
Sbjct: 452 EWERALDFEAQS-APYVQYVHARCCGILAEGDGEIPTDIDPSLLD----------SESER 500

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            LI  +A +P VIE A    EP+ +A Y  + A  F+  +           + A + ++ 
Sbjct: 501 DLIEVIARFPNVIEEAADDLEPHAVATYTREFAETFNAFYREC------PVLTAEDEEVR 554

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL LV A    I + L +IG+E+P  M
Sbjct: 555 DARLALVAAAKHTIANALGVIGIEAPESM 583


>gi|294885225|ref|XP_002771232.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239874712|gb|EER03048.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 602

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 115/605 (19%), Positives = 220/605 (36%), Gaps = 95/605 (15%)

Query: 37  PRDCAHGHLSTNAAMILSRPLG-------LDPLTIAELIVARIKID--PDVDSVFIAGKG 87
             +   G    N AM L++            P  I E I + +  +   + +SV +A  G
Sbjct: 35  TANPKFGDYQCNNAMGLAKKFKSELPDGMKIPKQIGEKIKSNLMEESPEEFESVTVAPAG 94

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGR-----NLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           F+ + LS  ++ K L+S V+   + G+            KV ++  S N    MHVGH R
Sbjct: 95  FVTVKLSSGWIAKQLTSSVLGECKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLR 154

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGY 200
             ++G+T++ ++ +SG +V R  ++ D G Q   L   +   Y   L++     DL   Y
Sbjct: 155 STILGETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVSDLQTFY 214

Query: 201 YPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                      +   +   E++     +++             K   +    L I+    
Sbjct: 215 KAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLGIEGLKE 274

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  ++      I   ++ L ++G V                + +  + +F      DD
Sbjct: 275 QGESFYNEM----IGPTVETLEKEGLV---------------VESNGAKCIFTDV---DD 312

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           V   ++KSDG Y Y + D+     +  +   D ++Y+       + K+L  VA       
Sbjct: 313 VPMMVVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHH 372

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
                L      +       K   R+G  + L  ++DE                      
Sbjct: 373 PPQTKLEYLGFGVVCGDDGKKFKTRSGATVKLTDLLDEAEDRAKKELESRLNAGEGEAAG 432

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           +G  SVR+  L +  +    F+F K+ +  K N   ++ YAYAR
Sbjct: 433 RSTGLTEEEFDRASKIIGVASVRYFDLRQNRTTNYIFNFDKMLD-PKGNTAVFLLYAYAR 491

Query: 461 CRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             SI R+A  D    LD+      +       +  E  L + +  +  V+++     + +
Sbjct: 492 ICSILRKANFDYHSGLDYSSEEVTI------TEEKERALALEILRFAEVMQSVLADLQCH 545

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +L  Y++DL + F   ++  +       V  ++++    RL L  A   ++    +I+ +
Sbjct: 546 RLCEYMWDLTNRFTAFYTECK-------VVGSDQE--RSRLLLCEATRRVLAQCFDILDI 596

Query: 580 ESPNE 584
                
Sbjct: 597 TPLER 601


>gi|330444190|ref|YP_004377176.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807300|gb|AEB41473.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 564

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/589 (22%), Positives = 228/589 (38%), Gaps = 91/589 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90
              +        GH   N AM L+R L   P +IAE IV+ +      DS+ IAG GFIN
Sbjct: 27  EPEVTPSTKELFGHYQCNDAMKLARVLKQAPRSIAEAIVSHLPHKEFFDSIEIAGAGFIN 86

Query: 91  LYLSPSYLRKILSSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
              S  +L + L+S    + SG+      +     + I+F S N    MHVGH R  ++G
Sbjct: 87  FTFSSKFLTERLNSFSSTLASGLR-----VEHPQNIVIDFSSPNIAKDMHVGHLRSTIIG 141

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           + LA ++++ G  V R  +I D G     L   +    ++A  +N  DL E         
Sbjct: 142 ECLARILSYVGNSVLRLNHIGDWGTAFGMLIAFIEESPEEANLDNLKDLTEL-------- 193

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFH 266
                    Y      F EE+     K  + Q ++ +   + +AL +   I  ISE  F 
Sbjct: 194 ---------YKRAHKRFAEEEA---FKKRAQQRVVALQAQEPQALALWKKICEISEKAFQ 241

Query: 267 RGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVD 321
           +     I DI+D  L ++G  +     P   +  +   +    D+ + +F     G  + 
Sbjct: 242 Q-----IYDILDITLEKRGESFYNPFLPEVIQDLESKHLITLSDKAKCVF---HEGFSIP 293

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             + KSDG Y Y   DLA  + + E    + +I V     S + + LEA A A       
Sbjct: 294 FMVQKSDGGYNYATTDLAAMRYRVEHDHAEKIIIVTDLGQSLHFQLLEATAIAAGYLHPG 353

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------------- 415
           +   +   + L  +G   K   R+G+ I L+ ++D                         
Sbjct: 354 MFSHVGFGLVLDAEGK--KFKTRSGENIKLQELLDTAIEKAREALLSHRPEVTETELEEL 411

Query: 416 --EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              +G +++++  L         F F K+  +   N   ++ YAY R + I R+      
Sbjct: 412 APIIGINAIKYADLSSHRVSDYIFSFEKML-RFDGNTAMFLLYAYVRIQGIKRR------ 464

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                L   ++    S  D +E  L + L  +P  ++       P+ L  YLY L   F+
Sbjct: 465 ---LHLQELSLSGPLSLQDPAEEALALSLLRFPEALQLTIKELCPHFLTEYLYTLTQKFN 521

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
             +                  L   RL L      ++ +G++++G+ + 
Sbjct: 522 RFFRDCHI---------EGSPLESERLTLCALTEKVLATGMHLLGLRTL 561


>gi|168334916|ref|ZP_02693036.1| arginyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 565

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 110/611 (18%), Positives = 214/611 (35%), Gaps = 75/611 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D+  +L   L +I     VE + L    IE P +   G  +       ++ L   P  
Sbjct: 1   MEDYKIQLAAVLAKITGISAVEAEEL----IEVPSNRDMGDFAF-PCFRFAKILKKSPNV 55

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTK 122
           IA  +  +I     ++ V      +IN Y+  + + + +L  ++     YG         
Sbjct: 56  IASELTEKIVKPQFIERVENVNA-YINFYVDKTVVVQAVLDKVLAEKDGYGFAAKKDKGN 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I++ S N   P H+GH R  V+G++L  +    GY      ++ D G Q   L ++ +
Sbjct: 115 IVIDYSSPNIAKPFHIGHLRSTVIGNSLYRIFEALGYNCIGINHLGDWGTQFGKLIVA-Y 173

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYS 237
            +Y          + E     V      K     E   + +   +   +   L + + + 
Sbjct: 174 EKYSTKEDVEQKGIQELLRIYVKFHDEAKSDPSLEDLARENFTKMEQGDANALALWRWFK 233

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             ++ +  R   K L+I  D    E  ++      +  +I  L  +            S+
Sbjct: 234 EISLKEFERV-YKMLDISFDSLNGEAFYN----DKMDRVIKELDDKKLT-------KISE 281

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             +  ++D                  + K DGS  Y   D+     + E   F   IYV 
Sbjct: 282 GAKIIELDNM------------SPCLITKKDGSSLYATRDITAALYRKETYDFKKCIYVT 329

Query: 357 GSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRL---------------------YRD 394
               + +  +   V   +       +  +   +V +                        
Sbjct: 330 ALAQNLHFSQFFKVIEKMGYAWSVDLVHVPFGMVSMETGSLSTRSGNVLLLEEILAEAVK 389

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                + ++  +      V  +VG  ++ F  ++    + + F + KV     E    YV
Sbjct: 390 KTKEIIEEKNPNLENKEEVAQDVGIGAIIFDDMYNTIIKDIQFSWEKVLNFDGE-TGPYV 448

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY YAR  S+ R++     D++        I  +   D   + L+  +  +  +I  A  
Sbjct: 449 QYTYARANSVLRKSGMAISDIEN-------ICVDLIIDEQSVALVKQIGAFNSMITEAAE 501

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +A Y  +LA  F+  +           +  ++ KL   RL LV +    I + L
Sbjct: 502 KYEPSVIARYAVNLAKCFNKFYHDNS-------ILVDDMKLKKARLALVVSTMYTIKNAL 554

Query: 575 NIIGVESPNEM 585
            ++G+++P +M
Sbjct: 555 WLLGIKAPKQM 565


>gi|316974934|gb|EFV58402.1| arginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1083

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 124/613 (20%), Positives = 230/613 (37%), Gaps = 112/613 (18%)

Query: 5   ADFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL---- 57
           A+  S +   LK I  K             I+I       HG    N+ M +++ L    
Sbjct: 24  ANSDSSVLQSLKLIFAKAVNDAFPNATECPIIITETSSEKHGDYQFNSCMAIAKFLSNSH 83

Query: 58  --GLDPLTIAELIVARI-------KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108
              + P  +AE IV  +       K    ++ + IAG GF+N++L+ + + + +  I V+
Sbjct: 84  STKISPRKVAEEIVNVLMTTVQLEKEKSLIEKIEIAGPGFLNIFLNFNAVHQRIFDIFVN 143

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G+   +  +    +V ++F S N    MHVGH R  ++GD +  L+ F G++V R  ++ 
Sbjct: 144 GV---KPPVLPAKRVVVDFSSPNIAKEMHVGHLRSTIIGDCICRLLEFCGFDVLRLNHVG 200

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L   +  R+               Y          +   K S    +  EE 
Sbjct: 201 DWGTQFGMLIAHLKDRFPN-------------YQNEPPHLADLQSFYKESKVRFDADEE- 246

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                K  +++ ++K+   + + +                       +I  L+R G +  
Sbjct: 247 ----FKSRALKEVVKLQAHEPEQIKAW-------------------TLICQLSRHGLLEI 283

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                           + ++++F     G      ++KSDG YTY  +DLA  K + +E 
Sbjct: 284 D---------------EGRKIVFPE---GCSTPLTIVKSDGGYTYDTSDLAALKHRLFEE 325

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             D ++YV+ +    + +++  V   +       + +      L       K   R+G+ 
Sbjct: 326 KADWVLYVVDAGQGLHFQQIFTVGKQLGWWNENSHRVQHIAFGLVLGEDKRKFRTRSGET 385

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           + L  +++E                             V    +++  L         F 
Sbjct: 386 VKLSDLLEEGMRRSAATLKEKQRDQVLSPKELDIAQRSVAYGCIKYADLSHNRKNDYVFS 445

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQ 497
           F K+ E  K N   Y+ YAY+R RSI R A     ++  +     +   E  FD   EL+
Sbjct: 446 FDKMLE-DKGNTAVYLLYAYSRMRSISRNA-----NVSRENLQEKIHCGEISFDHPKELK 499

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  + ++P ++ +      P  +  Y+Y+LA+VF   +       +     A   K+  
Sbjct: 500 LMKMIIKFPDIMSHVVENFLPNLICDYIYNLATVFTEFYDECYCIEKDPATGAL-VKINY 558

Query: 558 MRLQLVHAVASII 570
            RL L    A ++
Sbjct: 559 NRLILCEVTADLL 571


>gi|255279909|ref|ZP_05344464.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255269682|gb|EET62887.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 588

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 118/627 (18%), Positives = 228/627 (36%), Gaps = 84/627 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                + ++  L     K  V+       V  RP  C       N AM+ ++     P+ 
Sbjct: 1   MKKILTLIEEELIPAFEKAGVDASYAKVTVSNRPDLCE---FQCNGAMVAAKKYKKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA+ +VA ++ D           GFINL LS  +L   L+ +             K  K+
Sbjct: 58  IAKDVVAALQGDAMFAMAEAVNPGFINLKLSGEFLAGFLNDMQAD-ENLSVEKTAKPRKI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+HVGH R A++G+++  +  F G+EV  + ++ D G Q+  +   +  
Sbjct: 117 ILDYGGANVAKPLHVGHLRSAIIGESIKRMGRFMGHEVIGDVHLGDWGLQMGLIITELRR 176

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--- 240
           R  + +Y  +       Y G Y +     + D          + K     +  +++A   
Sbjct: 177 RQPELVYFQE------GYTGEYPQEAPFTIGDLEEIYPAASKKSKEDEAYRGEALEATKQ 230

Query: 241 -----------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDIIDNLARQGYV 286
                         I+R  +  L   +     E D  +G+      I +++  +  +G+ 
Sbjct: 231 LQQGNPGYRALWQHIMRVSIADLKKNYSRLNVEFDLWKGESDAQPYIPEMVQRMKDEGFA 290

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           +E        +     D+  +      T   +     +LKSDG+  Y   DLA    + +
Sbjct: 291 HE-------DQGALVVDVKEE------TDTKEIPPCIILKSDGASLYATTDLATIVERMK 337

Query: 347 -RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRA 404
               D + Y+       +  ++   A      K    +  L       +DG P K   R 
Sbjct: 338 LYQPDEIFYLTDKRQEMHFIQVFRTARKTGLVKEDTKLSFLGFGTMNGKDGKPFK--TRD 395

Query: 405 GDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLDFD 438
           G  + L +++                            VG  ++++  L  + S+   FD
Sbjct: 396 GGVMRLENLIADIEEEMYRKIMDNHEIDPQEARETAKIVGLSAIKYGDLSNQASKDYVFD 455

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +     + N   Y+ Y   R +SI  + +      +  +            + SE  L
Sbjct: 456 IDRFTSF-EGNTGPYILYTIVRIKSILNKYQAAGGSTENGVMLAAA-------NESEKAL 507

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + L  +  V+ENA     P+K+  Y+YDLA+ F+  +         + +   N      
Sbjct: 508 CLELGRFNGVMENAFEETAPHKICSYIYDLANEFNRFYH------ETKILSEENEAQKAS 561

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
            + L+     ++ + ++++G E+P  M
Sbjct: 562 WIALLRLTRRVLETCIDVLGFEAPERM 588


>gi|315506779|ref|YP_004085666.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315413398|gb|ADU11515.1| arginyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 572

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/619 (21%), Positives = 230/619 (37%), Gaps = 89/619 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERP-RDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D    L + L      +         + ++   R   H    ++AA+ L+R LG  P  I
Sbjct: 2   DLERLLTDRLAPAFAAVAG-------VPVDPAVRRSQHADFQSDAALGLARRLGQPPREI 54

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A  +  R  +     +V ++G GF+NL ++   L   L S + +    G  ++ +   V 
Sbjct: 55  AAEVRERAALADVCAAVEVSGPGFLNLTVAGHALGG-LVSALAADPRLGVPVVAEPETVV 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-- 182
           +++   N    MHVGH R  V+GD  A  + + G+ V R  ++ D G     L   +   
Sbjct: 114 VDYSGPNVAKEMHVGHLRSTVIGDAAARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDL 173

Query: 183 --WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYS 237
                 Q L   D D   G+Y     K    E   + S +    L   +   L + +   
Sbjct: 174 GEAGAAQELSMGDLD---GFYKAARAKFDDDEAFRERSRQRVVALQGGDPATLRLWRLLV 230

Query: 238 VQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q+    +   DL  + +  D F  E  +H      +   ++ L R G +          
Sbjct: 231 TQSEGYFLTVYDLLDVTLTGDDFRGESSYH----DQLAPTVEELDRLGLLRRS------- 279

Query: 297 KTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
                   D    +F    VG D   +   + KSDG Y Y A DLA  + +    G   +
Sbjct: 280 --------DGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAALRHRTGALGATRL 331

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRD--GMPIKM--- 400
           +YV+G     + + + AVAA           +      +L    R+ R   G  +K+   
Sbjct: 332 LYVVGLPQRRHFEMVFAVAAQAGWLTAPARAEHVGFGSILGPDGRMLRSRAGGSVKLAGL 391

Query: 401 ------------SKRAGDFITLR--HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                        +R  +        V   VG  ++++  L     +    D+ ++    
Sbjct: 392 LTEAVQRATALARERNPELGESEAAEVGRAVGVGAIKYADLSGDRHKDYVLDWERMLSLD 451

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
             N   Y+QYAY+R RSIFR+A     PD +  L            + +E  L + L  +
Sbjct: 452 -GNTAPYLQYAYSRVRSIFRRAGAAARPDAEVSLA-----------EPAERALAMELVGF 499

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+E      E ++L  YL+ LA  F   +      P LR        +   RL L   
Sbjct: 500 AAVVEEVAGGLEFHRLTAYLHRLAVAFSAFYERC---PVLR----AEGPVRESRLVLCDL 552

Query: 566 VASIINSGLNIIGVESPNE 584
              ++  GL+++G+ +P  
Sbjct: 553 TGRVLRQGLDLLGIRTPER 571


>gi|160879423|ref|YP_001558391.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160428089|gb|ABX41652.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 594

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 233/619 (37%), Gaps = 74/619 (11%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           +L N       +   E+K     +  RP  C       N A+  ++     P+ IA  IV
Sbjct: 7   QLTNLFTTAFVECGYEEKYGVVTISNRPDLCQ---YQCNGALAAAKQYKKAPIMIANEIV 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
              K +P +  +     GFIN  +   +L   L S+ V     G         + +++  
Sbjct: 64  EHCKDNPVLKEITAIMPGFINFSVKEEFLVDYLQSMSVD-ERLGCEEAKNPDTIVVDYGG 122

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N   P+HVGH R A++G+++  ++ F G+ V  + ++ D G Q+  +   V  R     
Sbjct: 123 PNVAKPLHVGHLRPAIIGESIKRMIRFLGHNVIGDAHLGDWGTQMGLIIAEVRKRQPNLS 182

Query: 190 YNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMM 242
           Y ++S   + P      +         A +YS E   F EE    + +         A+ 
Sbjct: 183 YFDESYTGEYPSEAPFTISELEEIYPTASEYSKEHPEFREEAKEVVFELQNGHRGYTALW 242

Query: 243 KII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             I        + +   LN+  D++  E D     P     ++  L   GY         
Sbjct: 243 NHIMTVSMNDLKKNYDNLNVHFDVWKKESDAQPYIPG----MVTYLKENGYA-------K 291

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            S+     D+  +      T   +     +LKSDG+  Y   DLA    + E     ++I
Sbjct: 292 ISEGALVVDVKEE------TDTKELPPCMILKSDGASLYATTDLATLVERMELFMPASVI 345

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+      + + +             +N+  L       +DG P K   R G  + L H
Sbjct: 346 YVVDKRQELHFELVFRCVKKTKLVPKDVNLTFLGFGTMNGKDGKPFK--TRDGGVMRLEH 403

Query: 413 VVDE--------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++D                           VG  ++++  L  + S+   FD  +     
Sbjct: 404 LMDSINEEVYKKIMSNREMEEEEAREIAKIVGLAALKYGDLSNQASKDYIFDIDRFTSF- 462

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   Y+ Y   R +SI  + ++    +D             E+  SE+ L++  A++ 
Sbjct: 463 EGNTGPYILYTIVRIKSILAKYQEENKAVDVSKLCIKSGNT-REYGISEVNLMLECAKFN 521

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +IE+A     P+KL  Y+YDLA+ F   +         + +   N++     + L+  V
Sbjct: 522 DMIEHAAYENAPHKLCAYVYDLANAFSTFYHEN------KIIAEENKEKQQEWIALIKLV 575

Query: 567 ASIINSGLNIIGVESPNEM 585
             I+++ + ++G  +P +M
Sbjct: 576 LRILSTCIELLGFSAPEKM 594


>gi|255994895|ref|ZP_05428030.1| arginine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993608|gb|EEU03697.1| arginine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 576

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 125/614 (20%), Positives = 229/614 (37%), Gaps = 74/614 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  DF + +   +   D +  V+   ++ I IE P D A+G  +      L++     P 
Sbjct: 6   MKKDFKAEIAKLVS--DSEEMVDADEIESI-IETPNDDANGDYAL-PCFTLAKKFRKSPN 61

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE +  ++     ++ +     G++N YL      K     V+S +    +L      
Sbjct: 62  LIAEDLAEKLFKADFIEKIEPVS-GYLNFYLKKESFIKDTLDEVISKLSAYGHLSSNDKT 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EF S N   P H+GH R  ++G+ LA++    GY   R  +I D G Q   +  +  
Sbjct: 121 VVVEFSSPNIAKPFHIGHIRSTLIGNALANISKALGYNTVRVNHIGDYGTQFGKIISAYK 180

Query: 183 -WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W  ++ +          YY   + +    E  ++ +       EE      K      +
Sbjct: 181 RWGNEEDVDREPVKTLLSYYTRFHAEAETDETLEEEARMHFKNLEEGREEETK------L 234

Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSK 297
            K  RD  LK     +D+   + D   G+      +  +ID +     +        KS+
Sbjct: 235 WKWFRDVSLKEFGKVYDLLGIKFDSFDGESFYTDKMPAVIDEMESMNLL-------EKSR 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
                ++ +  +           D  + KSDGS  Y   D+A    ++E+  F   IYV+
Sbjct: 288 GATIVNLQKYNM----------TDVLVKKSDGSSLYITRDIAAAIYRHEKYNFYKNIYVV 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-- 414
           G+    + K+L  +   +++  A+  V +   +     G    +S R G  + L  V+  
Sbjct: 338 GAQQDLHFKQLVKILELMNKPFAKDCVHVPFGMVSIEGGT---LSTRNGTVVFLEDVLSK 394

Query: 415 -----------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                   +VG  +V F  L+    +   F + +      E   
Sbjct: 395 AIEKTLVTLEDRNFSSDKRQEVARQVGVGAVVFQELYNTRIKDYQFSWDRALSFDGE-TG 453

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YVQY  AR  S+  +A D        +     +      + S   L+  +  +   +  
Sbjct: 454 PYVQYTCARANSVLSKASDEG----IAIKDIEDVDISYITNKSAYALVRLIFNFSDKLTE 509

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    EP  +A Y  D+   F+  +           +  +N +    +L LV A   ++ 
Sbjct: 510 AFERYEPSIVARYAMDVCKAFNRFYHDEH-------ILTDNEEERDAKLLLVKASVILLK 562

Query: 572 SGLNIIGVESPNEM 585
           + L I+G+ESP++M
Sbjct: 563 NVLKILGMESPDKM 576


>gi|317499896|ref|ZP_07958132.1| arginine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087881|ref|ZP_08336806.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898613|gb|EFV20648.1| arginine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330409576|gb|EGG89017.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 588

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 120/626 (19%), Positives = 238/626 (38%), Gaps = 92/626 (14%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             +   ++    K   +K++    +  RP  C       N AM  ++     P  IAE +
Sbjct: 6   ELITTEMEAAFEKAGYDKELAKVTLSNRPDLCE---YQCNGAMAGAKKYKKAPFMIAEDV 62

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +K     ++V +   GFINL L+P  +   L+ +  +  + G     +   + I++ 
Sbjct: 63  AVYLKESSYFETVEVVKPGFINLKLAPQSVADYLNQMSET-EKLGVEEAEEPKTIMIDYG 121

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
             N   P+HVGH R A++G+++  +  F G +V  + ++ D G Q+  +   +  R  + 
Sbjct: 122 GPNVAKPLHVGHLRSAIIGESVKRITRFKGNKVIGDIHLGDWGYQMGLIITELKKRKPEL 181

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSV-------- 238
            Y +++   E  YP      +G EL + Y  +S      EE     +    +        
Sbjct: 182 PYFDENFTGE--YPAEAPFTIG-ELEEIYPTASSYAKEDEEYRKEALHATYLLQNGHRGY 238

Query: 239 QAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           +A+   I        + + + LN++ D++  E D  +     I D++  L  +GY     
Sbjct: 239 RAVWNHIMNVSVTDLKKNYERLNVEFDLWKGEADAQKY----IPDMVQMLKEEGYARY-- 292

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE- 346
                         D   L+       D  + P   +LKSDG+  Y   DLA    + E 
Sbjct: 293 --------------DEGALVVDVQEESDKKEVPPCMILKSDGAALYDTTDLATLVQREED 338

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAG 405
              D +IYV+      +  ++   A           +  L       +DG P K   R G
Sbjct: 339 YQPDEVIYVVDKRQELHFTQVFRCAKKTGIVSPNTRLEFLGFGTMNGKDGKPFK--TREG 396

Query: 406 DFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             + L +++ E                          VG  ++++  L  +  +   FD 
Sbjct: 397 GVMRLENLIREINDEMYKKIMDNRTVEEEEAKKTARIVGLAAIKYGDLSNQAGKDYIFDV 456

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SI  + K+     +      ++ P     +  E  L+
Sbjct: 457 DRFTSF-EGNTGPYILYTIVRIKSILAKYKENGGSAE----KLSIRPS---GNVYEKALM 508

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + + ++  V E       P+KL  Y+Y++A+ F+  +         + +   + +     
Sbjct: 509 LQVLKFNDVFEAVCEETAPHKLCAYIYEIANEFNKFYH------ETKILSEEDEEKRSGY 562

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L+     ++ + ++++G E+P  M
Sbjct: 563 IALLGLTKRVLETCIDLLGFEAPERM 588


>gi|153814087|ref|ZP_01966755.1| hypothetical protein RUMTOR_00296 [Ruminococcus torques ATCC 27756]
 gi|145848483|gb|EDK25401.1| hypothetical protein RUMTOR_00296 [Ruminococcus torques ATCC 27756]
          Length = 585

 Score =  357 bits (916), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 120/626 (19%), Positives = 238/626 (38%), Gaps = 92/626 (14%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             +   ++    K   +K++    +  RP  C       N AM  ++     P  IAE +
Sbjct: 3   ELITTEMEAAFEKAGYDKELAKVTLSNRPDLCE---YQCNGAMAGAKKYKKAPFMIAEDV 59

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +K     ++V +   GFINL L+P  +   L+ +  +  + G     +   + I++ 
Sbjct: 60  AVYLKESSYFETVEVVKPGFINLKLAPQSVADYLNQMSET-EKLGVEEAEEPKTIMIDYG 118

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
             N   P+HVGH R A++G+++  +  F G +V  + ++ D G Q+  +   +  R  + 
Sbjct: 119 GPNVAKPLHVGHLRSAIIGESVKRITRFKGNKVIGDIHLGDWGYQMGLIITELKKRKPEL 178

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSV-------- 238
            Y +++   E  YP      +G EL + Y  +S      EE     +    +        
Sbjct: 179 PYFDENFTGE--YPAEAPFTIG-ELEEIYPTASSYAKEDEEYRKEALHATYLLQNGHRGY 235

Query: 239 QAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           +A+   I        + + + LN++ D++  E D  +     I D++  L  +GY     
Sbjct: 236 RAVWNHIMNVSVTDLKKNYERLNVEFDLWKGEADAQKY----IPDMVQMLKEEGYARY-- 289

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE- 346
                         D   L+       D  + P   +LKSDG+  Y   DLA    + E 
Sbjct: 290 --------------DEGALVVDVQEESDKKEVPPCMILKSDGAALYDTTDLATLVQREED 335

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAG 405
              D +IYV+      +  ++   A           +  L       +DG P K   R G
Sbjct: 336 YQPDEVIYVVDKRQELHFTQVFRCAKKTGIVSPNTRLEFLGFGTMNGKDGKPFK--TREG 393

Query: 406 DFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             + L +++ E                          VG  ++++  L  +  +   FD 
Sbjct: 394 GVMRLENLIREINDEMYKKIMDNRTVEEEEAKKTARIVGLAAIKYGDLSNQAGKDYIFDV 453

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SI  + K+     +      ++ P     +  E  L+
Sbjct: 454 DRFTSF-EGNTGPYILYTIVRIKSILAKYKENGGSAE----KLSIRPS---GNVYEKALM 505

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + + ++  V E       P+KL  Y+Y++A+ F+  +         + +   + +     
Sbjct: 506 LQVLKFNDVFEAVCEETAPHKLCAYIYEIANEFNKFYH------ETKILSEEDEEKRSGY 559

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L+     ++ + ++++G E+P  M
Sbjct: 560 IALLGLTKRVLETCIDLLGFEAPERM 585


>gi|14520895|ref|NP_126370.1| arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878801|sp|Q9V0V2|SYR_PYRAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5458112|emb|CAB49601.1| argS arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 625

 Score =  356 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 147/651 (22%), Positives = 262/651 (40%), Gaps = 108/651 (16%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
             ++   ++ +    K E +  D            G   T  A  L+R +   P  IAEL
Sbjct: 10  REKIIKVIESLAPGWKGEIEFKD------TPSPELGDFGTPVAFKLARVMKKPPFQIAEL 63

Query: 68  IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILS-SIVVSGIEYGRNLIGKGTKVNI 125
           IV  +K + P+      A  G++N ++   YL + L   ++  G  +G + IG+G KV +
Sbjct: 64  IVEELKKELPEGIREVRAINGYVNFFVDYGYLARQLIVEVLEKGDRFGSSDIGRGKKVIV 123

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  S NPT P+H+GH R A++GD++A ++ F GYEV  + YI+D G Q   +    + + 
Sbjct: 124 EHTSVNPTKPLHMGHARNAILGDSMARILRFLGYEVEVQNYIDDLGIQFAQVYWG-YLKL 182

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYS------ 237
           ++       +L E       + HV   L  + +  L   P  E +   I+K         
Sbjct: 183 REKFEKIMKELKEKGIKEDPIDHVLGLLYVEVNRVLEENPEIEAEIRDIMKKLESGELNG 242

Query: 238 ---VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               +++++        L I++D+ + E D        I   +  L R     E    P 
Sbjct: 243 RELAESVVRAQMVTTYRLGIKYDLLVWESDIVSRKLFEI--AVKLLERN----ENFYTPN 296

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER------- 347
           + K      MD  +L         +    L +SDG+ TY   D+AY   K+ +       
Sbjct: 297 EGKYKGAFVMDLSKLFPDM----KNPYLVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLY 352

Query: 348 ----------------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--QINV 383
                                 G D +I V+G++       ++     +  + A   ++ 
Sbjct: 353 KPWDEHTWTTAPDGESVKGKFGGADIVINVIGAEQRHPQMAIKHALKLLGFEDAAENLHH 412

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFI-----------------------------TLRHVV 414
           L  E V         K S R G ++                                 + 
Sbjct: 413 LAYEHVERPEG----KFSGRKGTWVGFTVDEVINEAIKRARELIEEKSPGLSDEEKEEIA 468

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ++VG  ++R+ M+     + + F +  V     E+   Y+QYA+ARC SI R+A +   +
Sbjct: 469 EKVGVGAIRYNMVKYSPDKKIIFRWEDVLNFEGES-APYIQYAHARCSSILRKAGNPEWE 527

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                          E    E +LI+ L+++P V+E A    +P+ +A+Y  +LAS+F+ 
Sbjct: 528 ALLKEANF------KELTERERELIILLSKFPEVVEQAGRDVKPHLIAWYANELASLFNK 581

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +           ++A  + +   RL LV AV  ++ + L ++G+E+P+ M
Sbjct: 582 FYMDH------PVIKAE-KGIREARLLLVMAVRQVLRNSLWLLGIEAPDRM 625


>gi|302870428|ref|YP_003839065.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573287|gb|ADL49489.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 572

 Score =  356 bits (915), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 137/619 (22%), Positives = 230/619 (37%), Gaps = 89/619 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERP-RDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D    L + L      +         + ++   R   H    ++AA+ L+R LG  P  I
Sbjct: 2   DLERLLTDRLAPAFAAVAG-------VPVDPAVRRSQHADFQSDAALGLARRLGRPPREI 54

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A  +  R  +     +V ++G GF+NL ++   L   L S + +    G  ++ +   V 
Sbjct: 55  AAEVRERAALADVCAAVEVSGPGFLNLTVAGHALGG-LVSALAADPRLGVPVVAEPETVV 113

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-- 182
           +++   N    MHVGH R  V+GD  A  + + G+ V R  ++ D G     L   +   
Sbjct: 114 VDYSGPNVAKEMHVGHLRSTVIGDAAARTLEWLGHRVLRANHLGDWGTPFGMLIEHLLDL 173

Query: 183 --WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYS 237
                 Q L   D D   G+Y     K    E   + S +    L   +   L + +   
Sbjct: 174 GEAGAAQELSMGDLD---GFYKAAREKFDDDEAFRERSRQRVVALQGGDPATLRLWRLLV 230

Query: 238 VQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q+    +   DL  + +  D F  E  +H      +   ++ L R G +          
Sbjct: 231 TQSEGYFLTVYDLLDVTLTGDDFRGESSYH----DQLAPTVEELDRLGLLRRS------- 279

Query: 297 KTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
                   D    +F    VG D   +   + KSDG Y Y A DLA  + +    G   +
Sbjct: 280 --------DGADCVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAALRHRTGALGATRL 331

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRD--GMPIKM--- 400
           +YV+G     + + + AVAA           +      +L    R+ R   G  +K+   
Sbjct: 332 LYVVGLPQRRHFEMVFAVAAQAGWLTAPARAEHVGFGSILGPDGRMLRSRAGGSVKLAGL 391

Query: 401 ------------SKRAGDFITLR--HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                        +R  +        V   VG  ++++  L     +    D+ ++    
Sbjct: 392 LTEAVQRATALARERNPELGESEAAEVGRAVGVGAIKYADLSGDRHKDYVLDWERMLSLD 451

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
             N   Y+QYAY+R RSIFR+A     PD +  L            + +E  L + L  +
Sbjct: 452 -GNTAPYLQYAYSRVRSIFRRAGAAARPDAEVSLA-----------EPAERALAMELVGF 499

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+E      E ++L  YL+ LA  F   +      P LR        +   RL L   
Sbjct: 500 AAVVEEVAGGLEFHRLTAYLHRLAVAFSAFYERC---PVLR----AEGPVRESRLVLCDL 552

Query: 566 VASIINSGLNIIGVESPNE 584
              ++  GLN++G+ +P  
Sbjct: 553 TGRVLRQGLNLLGIRTPER 571


>gi|126180153|ref|YP_001048118.1| arginyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862947|gb|ABN58136.1| arginyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 555

 Score =  356 bits (915), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 141/582 (24%), Positives = 233/582 (40%), Gaps = 93/582 (15%)

Query: 41  AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYL 98
            H  L++  A  L++     P  IA  I  ++  +P+     V  AG  ++N    P+ L
Sbjct: 30  DHADLASTIAFKLAKTEKRAPQKIAADIAEKLSGNPELGDVRVEAAGP-YVNFRFGPTLL 88

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + +   +  G      L  +  +V +E  SANP GP+HVGH R  V+GDTLA     +G
Sbjct: 89  SEAVREAIEPG---YGALQRRSGRVVLEHTSANPNGPLHVGHIRNTVIGDTLARTFRKAG 145

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--- 215
             +  +YY+ND G QI  ++    W +            E +Y         +E+     
Sbjct: 146 DPLEVQYYLNDMGRQIAIVS----WGFDHLDIARKEGEKEDHYVARVYVAANREIEKNPG 201

Query: 216 --KYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDP 270
             +    L+   E      V  +  +V    + I+  L ALN  HD F+ E DF R GD 
Sbjct: 202 ITEEIDHLMQKVERGDAETVAKFRRAVSLCAEGIKATLAALNAHHDRFVWESDFVRIGDV 261

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I + +  L +                      + + L    +  G +    L +SDG+
Sbjct: 262 DRIVEQVRRLPQ--------------------AHEDETLWVDLSEQGFEKKYILRRSDGT 301

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y   DLAY   K  R +D MI V+G+DH     +L A    + EK     ++  E V 
Sbjct: 302 SVYSTRDLAYHTWK-ARNYDRMIDVLGADHKLIGGQLRATLELLGEKAP--EIVFFEFVS 358

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L        MS RAG F++   +++E                           V   ++R
Sbjct: 359 LPEG----SMSTRAGKFVSADELIEEVAAKAFDEVTARRPELPEEERCAIAKSVAIAAIR 414

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + ++     +   F++ +  +  +++   Y+QYA+AR  SI  +A +      F+     
Sbjct: 415 YDIVKVSPEKSTVFNWKEALDFERQS-GPYIQYAHARACSILEKAGEFERAYTFET---- 469

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                      E+ L  HLA +P  IE       P+ LA Y  +LA +F+  +     +P
Sbjct: 470 ---------DHEVALARHLARFPAAIEQTVQELRPHLLAAYARELADLFNAFYH---YDP 517

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L+    +  +    RL LV AV + +   L  +G+++   M
Sbjct: 518 VLK----SEGETRNSRLALVDAVRNTLQESLETLGIDALRSM 555


>gi|292654504|ref|YP_003534401.1| arginyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371974|gb|ADE04201.1| arginyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 587

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 144/631 (22%), Positives = 257/631 (40%), Gaps = 92/631 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F   ++  L      + +     D + +E P +     L+++ A  L+  +G  P 
Sbjct: 1   MFRQFREEVETALSAALSSLDLPT---DDLGVEEPPEDVPATLASSVAFRLAGVVGAPPP 57

Query: 63  TIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IA  I   + ++      +V   G  ++N ++S +Y    L +   S   YGR     G
Sbjct: 58  KIAADIAEELSVEGYDYLAAVDTQGP-YVNFHVSDAYYDDTLDA-AASDEAYGRLPAT-G 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E  SANPTGP+HVG  R  V+GD +A+L+ F+G +V R YY+NDAG Q+     +
Sbjct: 115 DSVVVEHTSANPTGPVHVGRTRNPVIGDAVANLLDFAGNDVDRHYYVNDAGRQMAVFTWA 174

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK------ 234
                +  L +  +     Y    Y +  G    ++   E +   E +   I++      
Sbjct: 175 YETFDEDDLESEPARERVEYDLVRYYR-KGNAFLEEADPEEVERAEAEITEILQGIEEGD 233

Query: 235 -------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                  +  V  ++  +R+ L+ L  + D F+ E  F        RD+ + L       
Sbjct: 234 EETYARVETVVDQVLGGMRECLERLPAEFDEFVKETRF--MFDGSTRDLAERLKE----- 286

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                      T     +           G + +   L+SD +  Y   DLA+ + K++ 
Sbjct: 287 -----------TDHAVYEEDAWQLELDDYGFEKNLVFLRSDDTSLYTTRDLAHHEWKFD- 334

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +D  + V+G DH     +L A    +     ++  ++   V L        MS R G  
Sbjct: 335 NYDRAVTVLGEDHKLQSGQLRAALDILGNDVDKLENVIYSWVNLPGG---ETMSTRKGTG 391

Query: 408 ITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSEL 434
           + L  ++DE                                 VG  +VR+ ++ ++ ++ 
Sbjct: 392 VMLDDLLDEAIDRARDEVETRLEGRTRDDDLDEADIDRIARQVGIGAVRYDIVSKQPTKT 451

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F++ +      ++   Y+QY +ARC  I  +A      LD       V+  +     +
Sbjct: 452 ITFEWDQALNFEAQS-APYIQYVHARCCGIADEAATAG--LDASEADPAVLTTD-----A 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+  +A +P V+E A    EP+ +A +  +LA VF+  +   RE P    V   + +
Sbjct: 504 ERDLLATIARFPAVVETAADDLEPHTVATFARELAEVFNTFY---RECP----VLDADEE 556

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL LV A  + + + L I+GVE+P  M
Sbjct: 557 VGAARLALVEASRNAVANALAIVGVEAPESM 587


>gi|14591265|ref|NP_143342.1| arginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|7674343|sp|O59147|SYR_PYRHO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|256032304|pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
           Synthetase Complexed With Trna(Arg) And An Atp Analog
           (Anp)
 gi|256032306|pdb|2ZUF|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
           Synthetase Complexed With Trna(Arg)
 gi|3257902|dbj|BAA30585.1| 629aa long hypothetical arginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 629

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 144/626 (23%), Positives = 270/626 (43%), Gaps = 94/626 (15%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFI 89
            I ++   D   G   T  A  L++ L   P+ IAE IV ++K++ P+      A  G+I
Sbjct: 27  EIELKETPDPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKLKLNLPEGIKDVKAVNGYI 86

Query: 90  NLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N+++  P + R +++ I+  G  +G + IGKG KV +E  S NPT P+H+GH R A++GD
Sbjct: 87  NVFIDYPHFARILINDILAKGDRFGSSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGD 146

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +A ++ F GYEV  + YI+D G Q   +    + R ++      ++L E       + H
Sbjct: 147 VMARILRFLGYEVEVQNYIDDLGIQFAQVYWG-YLRLKEEFERIMNELRERGLKDNPIDH 205

Query: 209 VGKELADKYSSELLNFPE--EKWLPIVKDYS---------VQAMMKIIRDDLKALNIQHD 257
               L  + +  L + PE   +   I+K             + +++        L +++D
Sbjct: 206 ALGLLYVEVNRRLEDNPELENEIRDIMKKLESGELYGRKLAEEVVRAQMVTTYKLGVKYD 265

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           + + E D  R     I   ++ L++     E    P   K      MD ++L        
Sbjct: 266 LLVWESDIVRRKLFEI--ALELLSKN----ENFYIPSDGKYRGAFVMDLRKLFPDM---- 315

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-----------------------------G 348
            +    L +SDG+ TY   D+AY   K+ +                              
Sbjct: 316 KNPILVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKEWDSTTWTTAPDGKSMPNKFGN 375

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            + +I V+G++       ++     +  + A  N  L  L   + +    K S R G ++
Sbjct: 376 ANIVINVIGAEQKHPQLAIKYALQLLGFEDAAAN--LYHLAYEHVERPEGKFSGRKGTWV 433

Query: 409 -----------------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
                                            V ++VG  ++R+ ++     + + F +
Sbjct: 434 GFTVDEVIQEAVKRARELIEEKNPALSDEEKAEVAEKVGIGAIRYNLIKYSPDKKIIFRW 493

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             V     E+   Y+QYA+ARC SI R+A++    +D +   +N     ++    E +L+
Sbjct: 494 EDVLNFEGES-APYIQYAHARCSSILRKAEEEGIKVDPETLFKNA--DFTKLSERERELV 550

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+++PR++E A    +P+ +A++  +LAS+F+  +    ++P L+        +   R
Sbjct: 551 IMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFY---MDHPVLK----AEEGVREAR 603

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV AV  ++ + L ++G+E+P  M
Sbjct: 604 LLLVMAVEQVLKNALYLMGIEAPERM 629


>gi|313884321|ref|ZP_07818083.1| arginine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620399|gb|EFR31826.1| arginine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 563

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 125/612 (20%), Positives = 228/612 (37%), Gaps = 86/612 (14%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L  +  +   E+KI    +IE+P +  HG L+      L++     P  IA+ 
Sbjct: 4   KQIVVAALSPLVGEHLDEEKIAQ--LIEKPSNAEHGDLAFPV-FQLAKAFRKAPNLIAQE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +V +I      D V   G  +IN +L+      +I+S ++     YG   +G G  V ++
Sbjct: 61  LVEKIDG-AHFDKVEAVGP-YINFFLNRKEKSNEIISQVIKEDSHYGEVDLGHGGTVVLD 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           + S N   PM +GH R  V+G++L  +     Y+     ++ D G Q   L ++   W  
Sbjct: 119 YSSPNIAKPMSMGHLRSTVIGNSLDLMHQKMNYKTVSVNHLGDWGTQFGKLIVAYKGWGD 178

Query: 186 QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQ 239
           +  +  +  +     Y   + K      L D+  +      +      +     KD S++
Sbjct: 179 EATVRKDPVNELVKLYVEFHEKSEEDPSLEDQGRAAFKKLEDGDPEMTELWTWFKDESIK 238

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              K+       + I  D +  E  ++      + D +  LA +G               
Sbjct: 239 EFEKV----YDLMGISFDHYTGESFYN----DKMEDKLQILADKG-------ISTVENGA 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
               +D ++L              + +SDG+  Y   D+A    + E   F   +Y++G+
Sbjct: 284 TLVYLDDEEL----------PPALVKRSDGATLYITRDIATAYYRKETYNFVKSLYIVGN 333

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI---------- 408
           + + + ++L+A+   +    +   V +   +         K+S R G  +          
Sbjct: 334 EQANHFRQLKAILKRMGNDWSDDMVHIAFGLITLEGK---KLSTRKGKIVLLEAVMNEAM 390

Query: 409 ---------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                              V  +VG  +V F  L        DF   +V  Q +     Y
Sbjct: 391 ELALEQIEAKNPDLENKEEVARQVGVGAVIFHDLKSDRMNSFDFKLSEVV-QFEGETGPY 449

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY YAR +S+  +        +               D     +I  LAEY   +  AT
Sbjct: 450 VQYTYARAKSLLEKYGKELKADEI----------YELTDEYAWAVIKKLAEYSDTLVAAT 499

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A Y+  LA  F+ ++ + R          N+      R+ LV A + ++  G
Sbjct: 500 EKYEPSMIARYVIQLAQAFNKYYGNVRLL--------NDDDQLAARMALVKATSIVLKDG 551

Query: 574 LNIIGVESPNEM 585
           L+++GVE+P  M
Sbjct: 552 LSLLGVEAPENM 563


>gi|333029612|ref|ZP_08457673.1| Arginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740209|gb|EGJ70691.1| Arginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 597

 Score =  356 bits (914), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 129/633 (20%), Positives = 250/633 (39%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              RL + + +   ++        ++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEERLIDAVVKGIKELYGADVPAAQVQLQKTKKEFEGHL-TVVVFPFLRMSRKAPEATAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K +  + S F   KGF+NL ++PS   ++L+ I        + +      V IE
Sbjct: 62  ELGEYLKANEPIISNFNVIKGFLNLIIAPSCWVELLNDIHADAHYGIKEVGEDSKLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +MA +G +V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGHSLSKIMAANGNKVVKTNIVNDRGIHICKSMLA-WAKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELA--------DKYSSELLNFPEEKWLPIVK 234
           +      S     +  G Y     KH   ELA        D+ +       +E    +VK
Sbjct: 181 KGETPESSGKKGDHLVGDYYVAFDKHYKAELAELKSKGMSDEEAEASSVLMKEAREMLVK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+   +         +  K L +  D    E D +       ++ +D    
Sbjct: 241 WEANDPEVRALWNKMNGWVYTGFDETYKRLGVSFDKIYYESDTYLEG----KEKVDEGLA 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  ++                +   +    T  G D  + LL++DG+  Y   D+   K
Sbjct: 297 KGLFFKK---------------EDGSVWADLTKEGLD-QKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   D MIYV+G++ + + + L  +   +     +  V     +    +G   KM 
Sbjct: 341 MRFSDYSIDQMIYVVGNEQNYHFQVLSILLDKLGFAWGKDLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++DE                             VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMDEMIDTAKETSKELGKLDHISDEEANEIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR +S+ R+AK+    L         +   +E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGMVLPKS------VDVTTEIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  +++ A     P  +A Y+Y+L   ++  +           ++  +
Sbjct: 511 EKERGLIQLVADFAVIVDQAGKDYSPSGIANYIYELVKEYNQFYHD------FSILREED 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            K+ + RL L   VA  I +G++++G+E P+ M
Sbjct: 565 EKVKLFRLVLSQTVAETIKNGMDLLGIEVPDRM 597


>gi|306820585|ref|ZP_07454216.1| arginine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551402|gb|EFM39362.1| arginine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 565

 Score =  356 bits (914), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 119/609 (19%), Positives = 228/609 (37%), Gaps = 74/609 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   + N L + +  +  +K+I D  ++E P +   G  S      LS+ L   P  IA
Sbjct: 2   EFKLEIANILDD-NIDVLEQKEIYD--ILEVPPNSEMGDFSF-PCFKLSKALRKAPQAIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +  +I+    +  + +   G++N YL    + K     V+               + +
Sbjct: 58  EELCNKIEKPAFIRQIKVVS-GYLNFYLDSHTIIKQTLDKVLQEKTDYCKKKPNNKNIIV 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWR 184
           ++ S N   P H+GH R  V+G  L +L  F GY V    ++ D G Q   L ++   W 
Sbjct: 117 DYSSPNIAKPFHIGHIRTTVIGHALYNLYKFMGYNVIGINHLGDYGTQFGKLIVAYKKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPE-EKWLPIVKDYSVQAMM 242
            ++ L           Y   + +      L D+      N  + ++    +  +  +  +
Sbjct: 177 NEELLKQEPIKTLLALYVKFHEEEEKDSSLTDEARMWFKNLEDGDEEAKKLWSFFREESL 236

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K        L I+ D +  E  +       +  +++ L  +  +         S+ T   
Sbjct: 237 KEFSKVYDMLGIKFDSYNGESFY----SDKMPAVLEELKEKNLL-------QSSQGTTIV 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           D++   L              + K+DGS  Y   DLA  K + E   F   +YV+ S   
Sbjct: 286 DLEEYGL----------GAALVQKNDGSTLYLTRDLAAAKYRKETYNFYKTLYVVASQQM 335

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------ 415
            + K+++ V   +    A   + +   +    +G    +S R G+ + L  V++      
Sbjct: 336 LHFKQMKQVLKLMGYDWADDCIHVMFGMVSLEEGT---LSTRKGNVVFLEDVLNNAINKT 392

Query: 416 -------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                              ++G  +V F  L     +   F   K      E    YVQY
Sbjct: 393 RAIIEEKNPNLPDIEELSRQIGVGAVIFQELANSRIKDYVFSMEKTLSFDGE-TGPYVQY 451

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            YAR  S+ R++       DF       + +    +   + +I  ++ +  V+  +    
Sbjct: 452 TYARACSVIRKSN----GFDFSTANYESLAE----NEEAMNIIKIISTFDEVLIKSENKN 503

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP+ +A Y+ DL+  F+  +           +  +  ++   RL L  AV   I + ++I
Sbjct: 504 EPHHIARYVLDLSQAFNKFYHSN-------PINVDEVEIKKDRLALTLAVTYAIETAMSI 556

Query: 577 IGVESPNEM 585
            G+++P +M
Sbjct: 557 FGIQTPKQM 565


>gi|116753536|ref|YP_842654.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694355|sp|A0B5P0|SYR_METTP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116664987|gb|ABK14014.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 558

 Score =  356 bits (914), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 149/613 (24%), Positives = 256/613 (41%), Gaps = 85/613 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F DF S ++  LKE   +  +   + + + +       H  LST  A  LS  L  DP 
Sbjct: 1   MFLDFMSEVEGILKEGLDRCGLSVPLENSLDLSP-----HADLSTTIAFRLSPVLRKDPK 55

Query: 63  TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +A  I   +       D   + G  +IN Y+S ++L  +++        +GR    +  
Sbjct: 56  DVAAEIYNSMGSPSRWVDRAELVGP-YINFYMSRNFLDNVVTKAQGEDAWWGR----RSG 110

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E  SANP GP+HVGH R +V+GDT+  ++  +GY V  +YY+ND G Q   +    
Sbjct: 111 SVVVEHTSANPDGPLHVGHIRNSVIGDTIVRILRRAGYNVEAQYYVNDMGRQTAMVVWGC 170

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQ 239
                      D  +   Y     + +   EL+ +   EL+   E +   IVK +  + +
Sbjct: 171 DHLDLDDSKP-DHAIARVYIAAHKIMNEKPELSAEV-DELMRRYESRDPEIVKKFQRAAR 228

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  I   L  +NI HD +  E +F       + +I++ L R G               
Sbjct: 229 YAISGIERTLHRMNIHHDSYKWESEFV--WDGSVDEILEMLERTG--------------- 271

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            +  +    L    +  G +    L ++DG+  Y   DLAY K K E  ++ ++ V+G+D
Sbjct: 272 -RTVLKDGALQLDLSEEGFEKSLVLRRADGTTLYTTRDLAYHKWKAE-NYERVVEVLGAD 329

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
           H     +L      +     +  V++ E V L        MS R G FI+   ++DE   
Sbjct: 330 HKLISAQLRTALRMLGI--GEPEVVIFEFVSLPDG----SMSTRRGKFISADELLDEVEK 383

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   V   +VR+ ++     +   FD+    +  K +   
Sbjct: 384 QAYLEVTKRRPEMDEEFRRDVAGKVAVGAVRYDIVRVSADKATTFDWKTALDFEKLS-AP 442

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY++AR  SI  +A +       D F   ++      D  E+ LI  +AE+  VIE A
Sbjct: 443 FIQYSHARACSIINKAGE------LDEFDPGLL-----RDDYEIALIKKIAEFDLVIERA 491

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P++LA Y  +LA  F+  +           + A   +L   RL LV A  + +++
Sbjct: 492 ARELKPHQLATYARELAERFNLFY------RYDPVLDAKPVELRNARLGLVRASRNALSA 545

Query: 573 GLNIIGVESPNEM 585
            L+ +G+++P  M
Sbjct: 546 TLDTLGIDAPESM 558


>gi|189465272|ref|ZP_03014057.1| hypothetical protein BACINT_01618 [Bacteroides intestinalis DSM
           17393]
 gi|189437546|gb|EDV06531.1| hypothetical protein BACINT_01618 [Bacteroides intestinalis DSM
           17393]
          Length = 605

 Score =  356 bits (913), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 121/647 (18%), Positives = 241/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + N LK +      +     ++ +++ +    GHL T       R     
Sbjct: 1   MNIEDKLVTSVINGLKAL----YGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ S   ++L++I               
Sbjct: 56  PEQTAQEIGEYLKANEPSVAAFNVIKGFLNLTIASSAWIELLNNIHADKQYGITAATDHS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-------------- 226
            + +Y        S     +  G Y     K    +    +  F                
Sbjct: 176 -WSKYGNGETPESSGKKGDHLVGDYYVAFDKHYKAEVKDLMARFQAEGVTEEEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMM--------KIIRDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+A+         +   +  + + +  D    E + +  
Sbjct: 235 ASPLMNEAREMLVKWEAGDPEVRALWTKMNNWVYEGFDETYRKMGVGFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTPEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLIEEMVNTAKETSNELGKLDGLTQEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +  +
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIAVPAE 510

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 511 ------IPVGIELSEKEEGLIQMVADFAAVVKQAGSDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  +  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREEDEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|158321760|ref|YP_001514267.1| arginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|254782938|sp|A8MKD9|SYR_ALKOO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158141959|gb|ABW20271.1| arginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 587

 Score =  355 bits (912), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 118/620 (19%), Positives = 242/620 (39%), Gaps = 83/620 (13%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++  +++++  +   +KK     V +RP  C       N A+  ++     P+ IA  ++
Sbjct: 7   QISAFVEDVFEQKGYDKKYGMVTVSDRPDLCQ---FQCNGALPAAKEYKKAPIQIANDLL 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             +K     + + IAG GFIN+ +  S+L   ++ +  S  + G     +   + I++  
Sbjct: 64  PALKNVEIFEEITIAGPGFININVKDSFLAAYVNEMYGS-EKLGLEEPAEPQTIIIDYGG 122

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--- 186
           AN   P+HVGH R A++G++L  +  F G++V  + ++ D G Q+  +   +  R     
Sbjct: 123 ANVAKPLHVGHLRAAIIGESLKRISRFVGHKVIGDVHLGDWGLQMGMVISELRRRSPHLP 182

Query: 187 ------QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--V 238
                 +  Y  ++         +Y        +D  + E       +     + Y    
Sbjct: 183 YFDESYEGEYPAEAPFTIDELEDIYPAASKLAKSDAAAMEEAQQATAELQKGRRGYMALW 242

Query: 239 QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           Q ++ +   DLK     LN+  D++  E D  +     I  ++D L +  Y         
Sbjct: 243 QHILNVSVADLKKGYGNLNVDFDLWNGESDCQKY----IDVMVDYLKKNNYT-------S 291

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMI 353
            S      D      + + T         +LK+DGS  Y   DLA    +  +   D +I
Sbjct: 292 FSDGLLIVD------VAKETDNHVIPPFIVLKTDGSSLYSTTDLATIWERVQDYDPDQII 345

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           YV+      + +++   A         + +  L       +DG P K   R G  + L+ 
Sbjct: 346 YVVDKRQELHFEQVFRCAKKTKIAGEDLTLKFLGFGTMNGKDGKPFK--TREGGVMRLQD 403

Query: 413 VV--------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++                           +VG  ++++  L  + ++   FD  +     
Sbjct: 404 LIQIIKDAVYNKLQENEAIDPSEVDEISRKVGLAALKYGDLSNQITKDYVFDIDRFASF- 462

Query: 447 KENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           + N   Y+ Y   R +SI R+ A + F   D    P + +         E  L++ L+ +
Sbjct: 463 EGNTGPYILYTIVRIKSILRRIAAEGFQASDKIGVPHSDV---------ERSLLLKLSRF 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +E + +   P ++  Y+YDLA+ F+  +         + +     +     + L+  
Sbjct: 514 NETVEFSFVNHSPNRICDYIYDLANTFNKFYHD------TKIISETEFEKKSSWINLITL 567

Query: 566 VASIINSGLNIIGVESPNEM 585
             +++ + L ++G+E+P +M
Sbjct: 568 TMNVLETCLELLGIEAPEKM 587


>gi|218512655|ref|ZP_03509495.1| arginyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 291

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 184/293 (62%), Positives = 230/293 (78%), Gaps = 2/293 (0%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R  I++L  +GYVY+G LPPPK +  +  + DR+Q LFRST VGDD+DRPL+KSDGSYTY
Sbjct: 1   RTAINDLTFKGYVYKGTLPPPKGQLPEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTY 59

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           FAAD+AYFK K++RGFD MIYV+G+DH GYVKRLEAVA  VS  KA++ VLLC+LV+LYR
Sbjct: 60  FAADVAYFKNKFDRGFDEMIYVLGADHGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYR 119

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +G P+KMSKR+GDF+TLR VV+EVG DSVRFMML+RKNSE LDFDF KV EQSK+NPVFY
Sbjct: 120 NGEPVKMSKRSGDFVTLRDVVEEVGRDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFY 179

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQYA+ARC S+FRQA++ FP L+               D +ELQL+  LAE+PRV+E A 
Sbjct: 180 VQYAHARCMSVFRQAREAFPGLEVSAEDL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAA 238

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +QEP+++AFYLYDLAS FH HW+ G++   LRFV   NR+ ++ RL LV+AV
Sbjct: 239 QSQEPHRIAFYLYDLASTFHAHWNKGKDQTELRFVNDKNRESSIARLGLVYAV 291


>gi|281425987|ref|ZP_06256900.1| arginine--tRNA ligase [Prevotella oris F0302]
 gi|281399880|gb|EFB30711.1| arginine--tRNA ligase [Prevotella oris F0302]
          Length = 641

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 124/647 (19%), Positives = 243/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S + + +K +  +   EK     + +++ R    G+L T       +    +
Sbjct: 37  MNIENAICSSVISVVKGLYGQDVPEK----MVQLQKTRSNFEGNL-TLVVFPFLKISKKN 91

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +  +    + F   KGF+NL ++      +L+ I        + +    
Sbjct: 92  PEQTAQEIGEALVKECSAVAAFNVVKGFLNLTVAKEAWIGLLNDINADEKFGEKKVTDNS 151

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 152 PLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA 211

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-------LADKYSSELLN---------- 223
            + ++   +    +     +  G +     K        L  +Y  E ++          
Sbjct: 212 -WLKWGNGVTPEQAGKKGDHLIGDFYVAFDKHYRAECETLKAQYMQEGMDEEAAGEKAKA 270

Query: 224 ---FPEEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+++ + +         +  KAL +  D    E + +  
Sbjct: 271 EAPLMKEAHEMLVKWEQGDKEVRSLWEKMNNWVYAGFDETYKALGVDFDKIYYESNTYLE 330

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +     +G  +                 D   +    T  G D  + LL+SD
Sbjct: 331 GKKKVEEGL----AKGLFFRK---------------DDNSVWADLTNEGLD-QKLLLRSD 370

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 371 GTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSY 430

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------------DEVG 418
            +    +G   KM  R G  +    ++                               VG
Sbjct: 431 GMVELPNG---KMKSREGTVVDADDLIAAMIDDARKTSDELGKFKDMTEEEKQNVARIVG 487

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A+        +
Sbjct: 488 LGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAE------N 540

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +     +  E+  +  E+QLI  L E+   +E A     P  +A Y Y+L   F+  +  
Sbjct: 541 IAVPTTLSTEAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIANYCYELTKDFNQFYHD 600

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 601 ------YSILNADTETEKITRLMLAKNVAKVIKNGMELLGIEVPERM 641


>gi|332157706|ref|YP_004422985.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033169|gb|AEC50981.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 629

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 150/655 (22%), Positives = 269/655 (41%), Gaps = 102/655 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +      ++K+ +KEI  + + E ++ D   +E       G   T  A  L+R L   P+
Sbjct: 5   IKDQVREKVKDIVKEIAPEWEGEVELKDTPSLE------FGDFGTPIAFKLARLLRKPPI 58

Query: 63  TIAELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSS-IVVSGIEYGRNLIGKG 120
            IAE IV R K +     + +    G+IN +++  YL + L   I+     +G + +G G
Sbjct: 59  QIAEEIVERFKQELPEGIMDLKVVNGYINFFINYEYLARKLIEEILEKADRFGSSDLGHG 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E  S NPT P+H+GH R A++GD +A ++ F GY V  + YI+D G Q   +   
Sbjct: 119 KKVIVEHTSVNPTKPLHMGHARNAILGDVMARILRFLGYTVEVQNYIDDLGVQFAQVYWG 178

Query: 181 VF-------WRYQQALYNNDSDLPEGY-----YPGVYLKHVGKELADKYSSELLNFPEEK 228
                       +     N  + P  +     Y  V  K       DK    L+   EE 
Sbjct: 179 YLNLRDKFDEIMENLRKKNLKENPIDHALGLLYVEVNKKIEEDPEVDKEIRVLMKELEEG 238

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            +   K    + +++   +    L I++D+ + E D  +     I   ++ L +     E
Sbjct: 239 RVEGRKL--AEDVVRAQMETTYRLGIKYDLLVWESDIVKRRLFEI--AVELLEKN----E 290

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER- 347
               P + K      MD ++L         +    L +SDG+ TY   D+AY   K+ + 
Sbjct: 291 NFYVPEEGKYKGAFVMDLRKLFPDM----KNPYMVLRRSDGTATYTGKDIAYHLWKFGKI 346

Query: 348 ----------------------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
                                         D +I V+G++       ++     +    A
Sbjct: 347 DVDLLYKEWDENTWTTAPDGRQIPGKFGSADMVINVIGAEQRHPQLAIKYALKLLGFDDA 406

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFI--TLRHVVDE--------------------- 416
             N  L  L   + +    K S R G +I  T+  V+ E                     
Sbjct: 407 AEN--LYHLAYEHVERPEGKFSGRKGTWIGFTVDEVIREAIARAKALIEEKNPELSEEEK 464

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG  ++R+ ++     + + F +  V     E+   Y+QYA+ARC SI R+A+ 
Sbjct: 465 EEIAEKVGIGAIRYNLVKYSPDKKIIFRWEDVLNFEGES-APYIQYAHARCSSILRKARG 523

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
               +++ +          E    E +L++ L+++P ++E A    +P+ +A+Y  +LAS
Sbjct: 524 QGIPIEWRVLLEKA--NFKEITEREKELLILLSKFPEIVEQAGRDVKPHLIAWYANELAS 581

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F+  +    ++P L+        +   RL LV AV  ++ + L ++G+E+P +M
Sbjct: 582 LFNKFY---MDHPVLK----AEEGIREARLLLVMAVKQVLRNALWLLGIEAPEKM 629


>gi|288561373|ref|YP_003424859.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
 gi|288544083|gb|ADC47967.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
          Length = 573

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 138/621 (22%), Positives = 265/621 (42%), Gaps = 86/621 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           ++    +  +  L++   +   E    + I +E P +   G L++  +  L++ L   P 
Sbjct: 1   MYFKIKTEAEEALRKAVDQFDCEFD--EEIKLEFPPNPELGDLASTISFQLAKLLRKAPN 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V +I++    + V   G  ++N +++     K L   V    E    L     K
Sbjct: 59  LIAPEVVEKIELPEIFERVEATGP-YVNFFINHDIFAKQLLDSV---DEDYGQLAAVDEK 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +E  SANP GP+H+GH R +V+GD+L  L+  +GY V  +YY+ND G Q   LA+ V+
Sbjct: 115 IILEHTSANPNGPLHIGHIRNSVIGDSLRRLLTKAGYNVDTQYYVNDMGRQ---LAMIVY 171

Query: 183 WRYQQALYNNDSDL-PEGYYPGV-YLKHVGKELADKYSSELLNFPEEKW------LPIVK 234
              +  L   D       +  G  Y K       D+  ++ ++    K+      L    
Sbjct: 172 GMEELGLKLEDQPASKIDHKVGELYFKVNQMIKEDESLNDGVDATIRKYEGGPSELDEKF 231

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +Y+V + ++ +++ LK +N++HD F+ E  F R     + ++   L   GY  +      
Sbjct: 232 EYAVNSCLEGVKETLKRMNVKHDAFVWEGQFVR--TGIVDNLTQELYDIGYARQ------ 283

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                       + L    +      +  L ++DG+  Y   D+AY   K  +  D +I 
Sbjct: 284 -----------EEVLYLDLSEFDIPKELVLRRADGTSLYSTRDIAYHIYK-SKNCDKIID 331

Query: 355 VMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           + GSDH    +++E     + E      +I V+  E + L        MS R G FI++ 
Sbjct: 332 IFGSDHKLAARQVELALEILEEIEPNSDKIEVIFYEFITLPEG----SMSTRRGVFISVD 387

Query: 412 HVVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            ++D                           E+G  ++R+ +      + + F + +   
Sbjct: 388 ELMDEAVRRATEEIISRRPDLDKETIDKIAEEIGIGAIRYYIARLSPEKHITFKWDEALS 447

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             +      +QYA+AR   + ++A++   +   DL    V    S  D +E +L+  +A+
Sbjct: 448 FERG--CASIQYAHARACKLLKKAQE---EKGIDLADLTVEDTWS-LDENEKELVKLIAK 501

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P ++E++   +  + +A Y  DLAS F+  +   +       V  ++ +    RL LV 
Sbjct: 502 FPSLVEDSAKIRRVHPIAQYCQDLASAFNRFYKAEQ-------VIGSDVE--NARLLLVE 552

Query: 565 AVASIINSGLNIIGVESPNEM 585
                + + L+++GV +P+ M
Sbjct: 553 KSRITLRNALDLLGVSAPDMM 573


>gi|153810152|ref|ZP_01962820.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174]
 gi|149833331|gb|EDM88412.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174]
          Length = 584

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 121/629 (19%), Positives = 240/629 (38%), Gaps = 98/629 (15%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             +   L     K     +     V  RP  C       N AM  ++     P  IA+ +
Sbjct: 2   ELMAEELASAFEKAGYNPEYGKVTVSNRPDLCE---FQCNGAMAGAKAYKKAPFMIADDV 58

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           V+ +K         +   GFINL +   +L   L  +     +Y      K   + I++ 
Sbjct: 59  VSYLKDSQIFAMAEVVKPGFINLRVKEEFLGDYLKKMAAD-EKYSVKTAEKPKTIIIDYG 117

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
             N   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  R  + 
Sbjct: 118 GPNVAKPLHVGHLRSAIIGESIKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPEL 177

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELAD------------KYSSELLNFPEEKWLPI---- 232
           +Y +D+      Y G Y +     +++            K   E  N   E    +    
Sbjct: 178 VYFDDT------YEGEYPREAPFTISELEEIYPCASGKSKEDEEYRNEALEATHQLQQGK 231

Query: 233 -----VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                + ++ +Q  +  ++ +   LN+  D++  E D        I D++  +  QG+ Y
Sbjct: 232 PGYMALWNHIMQVSVTDLKRNYANLNVSFDLWKKESDAQPY----IPDMVQKMKDQGFAY 287

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
           E                D+  L+       D  + P   LLKSDG+  Y   DLA    +
Sbjct: 288 E----------------DQGALVVDVKEESDTKEIPPCMLLKSDGASLYTTTDLATIVER 331

Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSK 402
            +    D ++YV+      +  ++   A      K +  +  L       +DG P K   
Sbjct: 332 VKLFDPDEILYVVDKRQELHFIQVFRCARKTGLVKPETKLSFLGFGTMNGKDGKPFK--T 389

Query: 403 RAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSELLD 436
           R G  + L +++                          + VG  ++++  L  + ++   
Sbjct: 390 REGGVMRLENLIADIDEEMFHKIVENRSVKDQDAKETAEIVGLSAIKYGDLSNQATKDYV 449

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +     + N   Y+ Y   R +SI  + K+   +L+       V       + S+ 
Sbjct: 450 FDIDRFTSF-EGNTGPYILYTIVRIKSILNRYKEEGGNLEAGEILPAV-------NASQK 501

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L++ L ++   IENA   + P+K+  Y+Y++++ F+  +         + +   N+   
Sbjct: 502 NLMLELTKFGSTIENAFEEKAPHKICAYIYEVSNAFNSFYH------ETKILSEENQAQK 555

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
              L+L+     I+ + ++++G  +P+ M
Sbjct: 556 ESFLKLLGLTKDILETSIDLLGFSAPDRM 584


>gi|240102754|ref|YP_002959063.1| arginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910308|gb|ACS33199.1| Arginyl-tRNA synthetase (argS) [Thermococcus gammatolerans EJ3]
          Length = 640

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 158/665 (23%), Positives = 267/665 (40%), Gaps = 108/665 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVE--KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ +   R +  LK+   ++  E  KK    I  +       G   T  A  L+R     
Sbjct: 2   VYKEIRERARLSLKKALDEMLTEAGKKWEGEITFDDTPSLELGDFGTAVAFQLARVFRKA 61

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IAE +V RI+    +  V  A  G+IN Y+  SY  R+++  I+  G  YG + +GK
Sbjct: 62  PKLIAEELVERIEKPEGIVEVK-AVNGYINFYVDYSYFGRELVREILGKGEAYGESELGK 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV +E  S NPT P+H+GH R AV+GDT+A +M   GY+V  + YI+D G Q   +  
Sbjct: 121 GRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKVEVQNYIDDLGVQFAQVLW 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA-------------DKYSSELLNFPE 226
             +   ++     +++L E      ++ HV   L              DK   EL+   E
Sbjct: 181 G-YLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKRIEENPEVDKEVRELMKKLE 239

Query: 227 EKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
           E    I +      + ++K        + I +D+   E D  R        I +   R  
Sbjct: 240 EGNNEIAEIGRKLAERVVKAQMLTTYRMGIAYDLLSWESDIMRSG------IFEEAYRLI 293

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
              E      + K      MD ++L              L +SDG+ TY   D+AY   K
Sbjct: 294 EANENFFWGREGKYKGAFVMDLRKLFPDMKNPF----LVLKRSDGTATYTGKDIAYHLWK 349

Query: 345 YER---------------------------------GFDNMIYVMGSDHSGYVKRLEAVA 371
           + +                                   D +I V+G++       ++   
Sbjct: 350 FGKVKADMLYKLWDKRENHETWTTAPDGEEMPGRFGRGDIVINVIGAEQRHPQMAIKYAL 409

Query: 372 AAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFI--------------------- 408
             +  +      + L  E V         K S R G ++                     
Sbjct: 410 QLLGFEDSAENFHHLAYEHVVRPEG----KFSGRKGTWVGFTVDEVLNEAVQRARELVEQ 465

Query: 409 --------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                       + + VG  +VRF ++     +++ F +  V     E+   Y+QYA+AR
Sbjct: 466 KNPNLSEEEKDEIAEAVGVGAVRFNLVKYSPDKIITFRWDDVLNFEGES-APYIQYAHAR 524

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           C SI R+A++   + +++          S+    E +LI  LA++P VIE+A    +P+ 
Sbjct: 525 CASILRKARESGVETEWEKLLEKA--DFSKLTLREKELIKLLAKFPEVIESAGRDIKPHL 582

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL +LAS+F+  +           ++A +  +   RL LV AV  ++ +GL ++G+E
Sbjct: 583 VPAYLNELASLFNKFYMDH------PVLKAED-GIREERLLLVLAVKQVLRNGLELLGIE 635

Query: 581 SPNEM 585
           +P +M
Sbjct: 636 APEKM 640


>gi|229827434|ref|ZP_04453503.1| hypothetical protein GCWU000182_02823 [Abiotrophia defectiva ATCC
           49176]
 gi|229788372|gb|EEP24486.1| hypothetical protein GCWU000182_02823 [Abiotrophia defectiva ATCC
           49176]
          Length = 603

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 125/632 (19%), Positives = 249/632 (39%), Gaps = 82/632 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    S  +K  +++    +  +KK     +  RP  C       N AM  ++     PL
Sbjct: 5   VMKKVSVLIKEAVEKAFVSLGYDKKYGMVGISNRPDLCQ---YQCNGAMAAAKEFKKAPL 61

Query: 63  TIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            IA+ +  ++++  +    + +     GFINL L   +L   ++ +  +G  +G    G+
Sbjct: 62  FIADEVADKLQLSEEGKIFEKIEAVNPGFINLTLKDEFLADYVNEMGETG-NFGYENGGE 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +++   N   P+HVGH R A++G+++  +  F+G EV  + ++ D G  +  +  
Sbjct: 121 PKKIVLDYGGPNVAKPLHVGHLRPAIIGESIKRIERFAGNEVIGDVHLGDWGLPMGLIIT 180

Query: 180 SVFWRYQQALYNNDS-------------DLPEGYYPGVYLKHVGKELADKY---SSELLN 223
            V  R+ +  Y ++S             +  E  YP   +K    E        ++ LL 
Sbjct: 181 EVRHRHPELPYFDESFTGEYPKEAPFTIEELEEIYPLASIKSKEDEEYKNEALQATALLQ 240

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                ++ +   + +   +  ++ +   +N+  D++  E D        I D+++ +   
Sbjct: 241 NGNRGYMALWH-HILDVSVTDLKKNYHNINVSFDLWKKESDVQVY----IPDMVEKMKAD 295

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAY 340
           G+ Y                +    L+   T   D  + P   +LKSDG+  Y   D+A 
Sbjct: 296 GFAY----------------ISEGALVVDVTKEDDKKEIPPCIILKSDGAALYSTTDVAT 339

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPI 398
              + +     ++IYV+      + +++            ++N + L       +DG P 
Sbjct: 340 ILERVKLFNPTDIIYVVDKRQGMHFEQVFRTVKKTGIAPEELNLIFLGFGTMNGKDGKPF 399

Query: 399 -----------------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
                                  KMS R  D      V  +VG  ++++  L  + S+  
Sbjct: 400 KTREGGVMRLERLISEITEEVEAKMSDRDMDEEVKHKVAKQVGLAALKYGDLSNQASKDY 459

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDT 493
            FD  +     + N   Y+QY   R RSI  +  A+      D D F  + I        
Sbjct: 460 VFDLERFTSF-EGNTGPYIQYTVVRIRSILDKFIAEKSLNKADLDNFFAD-IKLVKAATA 517

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +L + LA++  +I+ A     P+K+  Y+Y++++ F   +           +   + 
Sbjct: 518 SERELELVLAKFSDMIDLAATEFAPHKVCAYIYEVSNCFSAFYHENH------ILNEQDE 571

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 L+L +    II   L+++G+E+P  M
Sbjct: 572 ARKYSMLKLSYITEKIIVKCLDLLGIEAPERM 603


>gi|297619524|ref|YP_003707629.1| arginyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378501|gb|ADI36656.1| arginyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 590

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 142/625 (22%), Positives = 256/625 (40%), Gaps = 83/625 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  ++L   L E    +  E+     I ++ P     G  STN    L++PL   P  IA
Sbjct: 4   EIENKLIEILNEKVKNLTGEE---IEIRLDEPPSINMGDYSTNICFRLAKPLRKAPKMIA 60

Query: 66  ELIVARIKIDPDVDSVFI----AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           E IV+++  + D+ ++ I    A  G+IN ++  +   K + S +    E    L  K  
Sbjct: 61  EDIVSQLIEENDLKALKIEKIEALNGYINFFVDYNEFSKEVLSNIADEKESFGKLETKNE 120

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +E  SANP GP H+GH R  V+GD+L  ++  +GY+V  +YY+ND G Q   +   +
Sbjct: 121 KVILEHTSANPNGPFHIGHGRNMVIGDSLKRILINAGYDVETQYYVNDMGRQEAIVVYGL 180

Query: 182 FWRYQQALYNNDSDLPEGYY-------PGVYLKHVGKELADKYSSELLNFPEEKWLPIV- 233
                      D  + E Y            L     +L   Y S+   F +E     + 
Sbjct: 181 DKFNLNENKKQDHGIGEVYVETNKLLNENEDLNQEILDLMRNYESDCEIFEKEGKESEIM 240

Query: 234 --KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              + +V   +   +  L  LNI HD F+ E  F +     ++ +I  L   G V     
Sbjct: 241 GKFEKAVNYTLDGFKQTLGNLNIYHDKFVWESSFVKN--GDVKSLIARLKETGKV----- 293

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                       +  +      +  G +    L + +G+  Y   D+AY   K E   D 
Sbjct: 294 ------------VKDEVYRLDLSDYGIEKKMVLARLNGTSLYSTRDIAYHIAKME-NCDK 340

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            + ++G+DH      +      +   +A  +++  E + L        MS R G FI++ 
Sbjct: 341 AVNLLGADHKLTAIMVNKTLDLLGYNEA--DIVFYEFISLPEG----SMSTRRGTFISMD 394

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            +++E                           +   +VR+ ++     + + F + +  +
Sbjct: 395 ELLEEAKVRAKSEIIKRNVATDEAEIEEIANKIAVGAVRYNIVRISPEKPMIFRWDEALD 454

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIV 500
             K      +QYA+ARC  I     +   +LD      N+   ESEF    + SE  L+ 
Sbjct: 455 FEKVGC-PVIQYAHARCCRILENVSN-SDNLDVLTNMDNINNLESEFNYEMNDSEKVLVR 512

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +++ P +IE +   ++P  LA Y+ D+A  F+  + +         +   +  +   R+
Sbjct: 513 MISKLPEIIEKSAEVRKPQILANYVLDVAQSFNKFYGNC-------PILKESENIKNSRI 565

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
           ++V+A   +I + L ++G+E P +M
Sbjct: 566 KIVNATKIVIENSLELLGIEVPGKM 590


>gi|307352773|ref|YP_003893824.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307156006|gb|ADN35386.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 554

 Score =  354 bits (910), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 146/608 (24%), Positives = 259/608 (42%), Gaps = 95/608 (15%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
             ++E   K   E+ +L            H  L++  A  L++   ++P  +A  I +++
Sbjct: 7   AVVEEALRKATGEENVL------ITDGGDHADLASTVAFSLAKSRRMNPAALASEIASQV 60

Query: 73  K--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           K  +      V + G  +IN      YL +++   +  G     +L  K  ++ +E  SA
Sbjct: 61  KDELSGKGIGVEVKGP-YINFIFGKKYLEEVIVEALKEG---YGSLPQKPGRICLEHTSA 116

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NP GP+HVGH R +V+GDTL+ ++  +GY +  EYY+ND G QI  ++          L 
Sbjct: 117 NPNGPLHVGHIRNSVIGDTLSRVLRKAGYTLEVEYYVNDMGRQIAIVSWGF---DNIGLA 173

Query: 191 NNDSDLPEGYYPGVYLKH----VGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKI 244
            N+ +  + Y   VY+         E   +     +   E     +V+ +  +V   +  
Sbjct: 174 QNEGEKDDHYVARVYVAANRAIEADESIKEEIDRRMALIENGDPEMVRKFRDAVLMCVGG 233

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I++ L  LN++H+ FI E DF R     + +++  L          LP  K +     D+
Sbjct: 234 IKETLLDLNVKHNRFIFESDFVRN--GLMMNVLHRLEA--------LPEAKHEGVLSLDL 283

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
                    T  G + +  L +SDG+  Y A DLAY + K +  F+ +I V+G+DH    
Sbjct: 284 ---------TEFGFEKEYVLRRSDGTSVYAARDLAYHEWKSD-NFERIINVLGADHKLIG 333

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
           ++L+A    + +K     ++  E V L        MS RAG FI+   +++         
Sbjct: 334 RQLQATMQLLGDKVP--EIVFFEFVSLPEG----SMSTRAGKFISTDELLEHVFEKALEE 387

Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              V + ++RF ++     +   FD+ +  +  K++   Y+QYA
Sbjct: 388 VETRRPELSADEKSSIARSVATGAIRFDIVRVSPDKATVFDWKEALDFEKQS-APYIQYA 446

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI  +A +       +                E+ L  H+A +P+VI +      
Sbjct: 447 HARACSILEKAGEFEESFSAE-------------SEYEVALAKHIALFPKVIADVAGDLR 493

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P+ LA Y  +LA +F+  +   R +P L+        L   RL LV A  + +   L  +
Sbjct: 494 PHVLAIYARELADLFNTFY---RFDPVLK----AEGDLRNSRLTLVKAAQNTLKEALETL 546

Query: 578 GVESPNEM 585
           G+++   M
Sbjct: 547 GIDAVRSM 554


>gi|160891544|ref|ZP_02072547.1| hypothetical protein BACUNI_03996 [Bacteroides uniformis ATCC 8492]
 gi|156858951|gb|EDO52382.1| hypothetical protein BACUNI_03996 [Bacteroides uniformis ATCC 8492]
          Length = 605

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 129/647 (19%), Positives = 247/647 (38%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S +   LK +      +     ++ +++ +    GHL T       R     
Sbjct: 1   MNIEQKLVSSVIGGLKAL----YGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    + F   KGF+NL ++ S   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLQANEPSVAAFNVIKGFLNLTIASSAWIELLNGIHADKQYGIVAATDNS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K+ SE +N  E       
Sbjct: 176 -WQKYGNGETPESSGKKGDHLIGDYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAET 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+A+ K +         +  + + +  D    E + +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYAGFDETYRMMGVTFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYRK---------------EDGSVWADLTGEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMAEMIDTAKETSNELGKLDGLTKEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+AK+   ++   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGIEI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +P   E    E  LI  +A++  +++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PAQLPAGIELSEKEEGLIQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREENEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|291515730|emb|CBK64940.1| arginyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 593

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 128/641 (19%), Positives = 239/641 (37%), Gaps = 104/641 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    S  ++  ++ +  ++  E     ++ I++ R    G   T     L R     
Sbjct: 1   MNIETFISDAVRRSVEALYGELGDE-----QLQIQKTRREFEGDY-TLVTFPLLRRSRKS 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A  I   +  +    + F   KGF+NL L  ++     + +     E        G
Sbjct: 55  PEATATEIGEYMAANVPEIASFNVIKGFLNLSLDSAFWAARFAEVAAD--ERFGQAPATG 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  +G+ V +   +ND G  I    L+
Sbjct: 113 RTVMVEYSSPNTNKPLHLGHIRNNLLGYSVAQILKANGHTVIKANLVNDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL----------------ADKYSSELLNF 224
            +  Y        S +   +  G Y     K                  A K +  +L  
Sbjct: 173 -WKLYGNGETPASSGMKGDHLVGKYYVEFDKHYKAQIRELVAQGQPEDEAKKNAPIMLQA 231

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E       +D  V ++ + +            KAL +  D    E   +    S    +
Sbjct: 232 QEMLRKWEARDPEVYSLWETMNGWVYEGFDVTYKALGVDFDKVYYESQTYLLGKS----L 287

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++   ++G  Y                     +    T  G D ++ LL+ DG+  Y   
Sbjct: 288 VEEGLKKGVFYRRP---------------DNSVWIDLTADGLD-EKLLLRGDGTSVYMTQ 331

Query: 337 DLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYR 393
           DL     ++E    D+MIYV+G++ + + + L+ V   +        I  L   +V L  
Sbjct: 332 DLGTAFRRFEDNRLDDMIYVVGNEQNYHFQVLKLVLKKLGYADWSDHITHLSYGMVELPE 391

Query: 394 DGMPIKMSKRAGDFITLRHVVD-----------------------------EVGSDSVRF 424
                KM  R G  +    +++                              VG  ++++
Sbjct: 392 G----KMKSREGTVVDADDLIEGMVSTAREMSAELGKLDGCSEEEANAVSTMVGLGALKY 447

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + FD  +  +    N   ++QY +AR RS+ R+A +   D          
Sbjct: 448 FILKVDPKKTMLFDPRESIDF-NGNTGPFIQYTHARIRSVLRKAAEAGIDFGGA------ 500

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
               +++   E+ L+  L EYP V+++A     P  +  Y+Y+LA  F+G++        
Sbjct: 501 --ATADYLREEIDLVKSLTEYPSVVKSAGENFAPSVVGAYVYELAKQFNGYYHDH----- 553

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++  N  +  MRLQL   VA +I  G+ ++G++ P  M
Sbjct: 554 -SILKEENAGVRTMRLQLAQQVARVIKEGMKLLGIDVPERM 593


>gi|212223653|ref|YP_002306889.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008610|gb|ACJ15992.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 642

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 154/664 (23%), Positives = 263/664 (39%), Gaps = 106/664 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEK--KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           + +   +++  L E   K+  E   +    +  +   +   G  +T  +  L+R     P
Sbjct: 3   YTEVKEKVRLILTEELKKMLQESGREWEGEVTFDETPNIELGDFATTVSFQLARVFRKAP 62

Query: 62  LTIAELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILS-SIVVSGIEYGRNLIGK 119
             IAE IV RIK     +   + A  G+IN YL+     K L   I+  G  YG +  GK
Sbjct: 63  KLIAEEIVERIKDKLPGEVSDVKAVNGYINFYLNYEAFGKDLVSEILKRGEHYGESEFGK 122

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV +E  S NPT P+H+GH R AV+GDT+A +M   GY V  + YI+D G Q   +  
Sbjct: 123 GRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRALGYNVEVQNYIDDLGVQFAQVLW 182

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV-------------GKELADKYSSELLNFPE 226
             +   ++     +++L E       + HV             G    DK   EL+   E
Sbjct: 183 G-YLNLKEEFERLEAELREKGVKEDVIDHVMGLLYVEVNKRIEGNPEVDKEVRELMKKLE 241

Query: 227 EKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQ 283
           E    I +      + ++K        +NI +D+   E D  R G       +I++    
Sbjct: 242 EGDNEIAEIGRKLAERVVKAQMMTTYRMNITYDLLSWESDIMRSGIFEEAYGLIESNPNF 301

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
            +  EG          +K   D K                L +SDG+ TY   D+AY   
Sbjct: 302 FWAEEGKYKGAFVMDLRKLFPDMKNPFL-----------VLKRSDGTATYTGKDIAYHLW 350

Query: 344 KYER---------------------------------GFDNMIYVMGSDHSGYVKRLEAV 370
           K+ +                                   D +I V+G++       ++  
Sbjct: 351 KFGKVSSDMLYKPWDRLEDHETWTTAPDGEEMSGKFGKADIVINVIGAEQKHPQMAIKYA 410

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------------TLRHVVDE- 416
              +  + +  N        + R     K S R G ++               + +V+E 
Sbjct: 411 LQLLGFEDSAQNFHHLAYEHVVR--PEGKFSGRKGTWVGFTVDEVLNEAVRRAKELVEEK 468

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          VG  +VRF ++     +++ F +  V     E+   YVQYA+ARC
Sbjct: 469 NPNLSEEEKEKIAEAVGVGAVRFNLVKYSPDKIITFRWEDVLNFEGES-APYVQYAHARC 527

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R+A++    ++++   +      S+    E +LI  LA +P +IE A    +P+ +
Sbjct: 528 ASILRKAEESGVSVEWEELLKRA--DFSKLTNREKELIKLLARFPEIIEGAGKDIKPHLI 585

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
            +Y  ++AS+F+  +           ++A +  +   RL LV A   ++ + L ++G+ES
Sbjct: 586 PWYANEVASLFNKFYMDH------PVLKAED-GVREERLLLVLATKQVLRNALALLGIES 638

Query: 582 PNEM 585
           P +M
Sbjct: 639 PEKM 642


>gi|15835354|ref|NP_297113.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285526|ref|ZP_06194920.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289537|ref|ZP_06195839.1| arginyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336923|ref|ZP_07225125.1| arginyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878798|sp|Q9PJT8|SYR_CHLMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|7190768|gb|AAF39548.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 563

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 130/611 (21%), Positives = 225/611 (36%), Gaps = 83/611 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L +  +S   + +++   +  +E+  LD   I        GH   N AM L+R L   P 
Sbjct: 4   LLSFLTSLCSSAIRQAFPE--LEELTLD---ITPSTKEHFGHYQCNDAMKLARALRKSPR 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE IVA I   P   S+ IAG GFIN   S  +L   L        +     +    K
Sbjct: 59  AIAEEIVAHIPATP-FSSIEIAGAGFINFTFSKEFLANQLQIFSQELAKGF--PVSSPQK 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V I+F S N    MHVGH R  ++GD LA   +F G++V R  +I D G     L   + 
Sbjct: 116 VIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYLQ 175

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSVQA 240
              Q  ++  ++ L E Y           E   +  Y+   L   + + L + K      
Sbjct: 176 ETAQTDIHQLEN-LTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQALALWKQ----- 229

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +  +     + +    D+ +        +P  + D++ +L  +  V              
Sbjct: 230 ICAVSEKSFQKIYSILDVELHTRGESFYNP-FLADVVSDLESKNLV-------------- 274

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
               D  + +F        +   + KSDG Y Y   D+A  + + ++   D ++ V  S 
Sbjct: 275 -TLSDGAKCVFHEE---FSIPLMIQKSDGGYNYATTDVAAMRYRIQQDHADRILIVTDSG 330

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---- 415
            S + + LEA   A      +  +       L  D    K   R+G+ I L+ ++D    
Sbjct: 331 QSLHFQLLEATCLAAGYLPHK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLQELLDTAIE 389

Query: 416 -----------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +G +++++  L         F F K+  + + N   
Sbjct: 390 KAKESLREHRPEISEEELAYQGPILGINAIKYADLSAHRINDYVFSFEKML-RFEGNTAM 448

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            + YAY R + I R+ K         L         S  + +E  L + L  +P V++  
Sbjct: 449 SLLYAYVRIQGIKRRMK---------LDTLPQKGPLSIHEPAEETLALTLLRFPEVLDLT 499

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ L  YLY L + F+  +                      RL L       + +
Sbjct: 500 LRELCPHFLTDYLYVLTNKFNAFFRDCHI---------EGSDYQQERLYLCGLTEKTLET 550

Query: 573 GLNIIGVESPN 583
           G++++G+++ +
Sbjct: 551 GMHLLGLKTLD 561


>gi|15605181|ref|NP_219967.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|255311266|ref|ZP_05353836.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317568|ref|ZP_05358814.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|7674345|sp|O84460|SYR_CHLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3328887|gb|AAC68054.1| Arginyl tRNA Transferase [Chlamydia trachomatis D/UW-3/CX]
 gi|296436909|gb|ADH19079.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748585|gb|ADI51131.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749465|gb|ADI52143.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 563

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 135/595 (22%), Positives = 222/595 (37%), Gaps = 89/595 (14%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++E+  LD   I        GH   N AM L+R L   P  IAE IVA I   P   S+ 
Sbjct: 22  ELEELTLD---ITPSTKEHFGHYQCNDAMKLARVLHKSPRAIAESIVAHIPPTP-FSSIE 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN   S  +L   L +         R       KV I+F S N    MHVGH R
Sbjct: 78  IAGAGFINFTFSKEFLASQLQTFSKELANGFR--AASPQKVIIDFSSPNIAKDMHVGHLR 135

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD LA   +F G++V R  +I D G     L   +    Q+A++  +         
Sbjct: 136 STIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYLQETSQEAIHQLE--------- 186

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-IS 261
                    +L   Y      F E+      K  S   ++ +   D +AL +   I  +S
Sbjct: 187 ---------DLTALYKKAHARFAED---SEFKKRSQHNVVALQSGDAQALALWKQICSVS 234

Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMV 316
           E  F       I  I+D  L  +G  +            +  ++    D  + +F     
Sbjct: 235 EKSFQ-----TIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCVF---HE 286

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS 375
              +   + KSDG Y Y   D+A  + + ++   D ++ V  S  S + + LEA   A  
Sbjct: 287 AFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAG 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------- 415
              ++  +       L  D    K   R+G+ I LR ++D                    
Sbjct: 347 YLPSK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEE 405

Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   +G +++++  L         F F K+  + + N    + YAY R + I R+ 
Sbjct: 406 ELAYQGPILGINAIKYADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRM 464

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               P  +  L            + +E  L + L  +P +++       P+ L  YLY L
Sbjct: 465 GLESPPQEGPLAVH---------EPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYAL 515

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
            + F+  +                      RL L       +++G++++G+++ N
Sbjct: 516 TNKFNAFFRDCHI---------EGSDSQQERLYLCGLTERTLSTGMHLLGLKTLN 561


>gi|147920891|ref|YP_685302.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121688069|sp|Q0W6L7|SYR_UNCMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110620698|emb|CAJ35976.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 563

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 150/616 (24%), Positives = 249/616 (40%), Gaps = 86/616 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           ++          +K+         + +  +      +  H  +S++    L++ L  +P 
Sbjct: 1   MYLKLLEEAGRLMKQAVADAGYTVEDMSLV------ESQHADVSSSLPFRLAKELKKNPK 54

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  IV ++     +D V   G  +IN Y S  Y+   L  I+     +   L   G K
Sbjct: 55  EIAAAIVEKMGKSEYIDRVEATGA-YINFYASQKYITDSLKEILSEKKFF--ELEPNGIK 111

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +E  SANPTGP+HVG  R  ++GDTLA L+   GY++  +YY++D G Q  T+     
Sbjct: 112 VILEHTSANPTGPLHVGRGRNPIIGDTLARLLRAGGYDLEVQYYVDDMGKQEATIVWGYD 171

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVG----KELADKYSSELLNFPE--EKWLPIVKDY 236
              +      D+D P+     VY          E  +K  SE+LN  E  +    +    
Sbjct: 172 HLDRIKPGKPDTDKPDHEIVEVYRAATDLRKSDEAVEKEISEILNAYEHMDPATAVKFRE 231

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            V+  ++  +  L  +N+ +D F+ E DF R     +   +  LA               
Sbjct: 232 MVERCLEGQKMTLARMNVFYDRFVWESDFVR--DGSVNKAVKKLAE-------------- 275

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             +Q        L    +  G D +  L ++DG+  Y   D+A+   K  R  D  I V+
Sbjct: 276 --SQYATTKDGALALDLSSFGMDKEFVLTRADGTSLYTTRDIAFHVWKLAR-CDRAINVL 332

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G D    ++RL A  + + EKKA   ++    V L       +MS R G  + L  ++DE
Sbjct: 333 GEDQKLAMQRLNAALSILGEKKA-PTIVFYSFVSLPEG----RMSTRKGVVVNLDDLLDE 387

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  +VRF ++     + + F +    +  K+ 
Sbjct: 388 AVERAYVEVDKRRKDIPEEKKRQIAEAVGIGAVRFDIVRVAPEKSITFKWETALDFEKQG 447

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              ++QYA+ARC SI  +AK    D                 +  E  L+  +A  P VI
Sbjct: 448 -APFIQYAHARCCSILEKAKPGEYDASM------------LREPEEAALVKKIAMMPYVI 494

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +NA+   +P+ +A Y  +LA  F+  +       R+  V     +L   RL LV A    
Sbjct: 495 KNASTELKPHVIAIYARELAEAFNQFY-------RVSPVLIAEPELKEARLALVEASRKA 547

Query: 570 INSGLNIIGVESPNEM 585
           + + L ++G+ +  EM
Sbjct: 548 LAASLGMLGIAAIEEM 563


>gi|332686748|ref|YP_004456522.1| arginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370757|dbj|BAK21713.1| arginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 563

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 124/609 (20%), Positives = 251/609 (41%), Gaps = 80/609 (13%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   + E+       ++IL    +E P+   HG ++     IL++     P  IA  
Sbjct: 4   KEIVAKAIYEVVKDDLKMEQILQA--LETPKAVEHGDVAF-PTFILAKTYRKAPKQIATE 60

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           +  +I      + + + G  ++N ++    + ++++ +I+     YG   IG+   + I+
Sbjct: 61  LAEKINTTE-FEKIAVVGP-YLNFFMCKEMISQQVIQTILQEKNHYGEYTIGENRNITID 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
             S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  
Sbjct: 119 MSSPNIAKPISMGHLRSTVIGNSIALILKKIGYQPVRINHLGDWGTQFGKLIVAYKKWGS 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMK 243
           ++ +       P      +Y+K       +   +E LN     W   +++   +A  + K
Sbjct: 179 EEKVKMT----PILELFHLYVKFHD----EAEKNEELNDEARVWFKKLEEGDTEATQLWK 230

Query: 244 IIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             R++ L+  N  + +     D + G+      + +I+  L  +  + E        K  
Sbjct: 231 WFREESLQEFNKIYAMLEVSFDSYNGEAFYNDKMDEIVTMLEEKHLLEE-------DKGA 283

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
           +  D+   +L              + KSDG+  Y   DLA    +     F   +Y++G+
Sbjct: 284 EIVDLSSYEL----------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYIVGN 333

Query: 359 DHSGYVKRLEAVAAAVSEKKAQI----------------------NVLLCELVRLYRDGM 396
           + + + K+L+AV   +    +                         VLL E++    +  
Sbjct: 334 EQAIHFKQLKAVLKELGFDWSDDMKHIPFGLITQGGKKLSTRKGKVVLLEEVLNEAIESA 393

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             +++++  + +    V  +VG  +V F  L        DF   +V  Q +     YVQY
Sbjct: 394 NQQIAEKNPELMNREEVAKQVGIGAVIFHDLKNDRLNNFDFVLDEVV-QFEGETGPYVQY 452

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            +AR  SI R+A +  P  D +             D+   ++I  L E+P ++  A    
Sbjct: 453 THARAMSILRKA-EFIPKADTNYA---------LNDSESWRIIKLLQEFPTIVLTAADKY 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +   LA  F+ +++      +++ +  +N+     RL LV+A+  I+   L +
Sbjct: 503 EPSVIAKHAIRLAQAFNKYYA------QVKILTEDNQ--KENRLALVYALTIILKEDLRL 554

Query: 577 IGVESPNEM 585
           +G+ +PNEM
Sbjct: 555 LGLHAPNEM 563


>gi|159906015|ref|YP_001549677.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686996|sp|A9AAS2|SYR_METM6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|159887508|gb|ABX02445.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 566

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 142/614 (23%), Positives = 249/614 (40%), Gaps = 83/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + +   LK+   ++   +     I +E P     G  STN +  L++ L   P  IA
Sbjct: 2   DVENLIITTLKDKVKELTGTEM---DIRLEEPPAINMGDYSTNISFRLAKDLKKAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I   + I    + +  A  G+IN +++     K   S + S  E    L  +G KV +
Sbjct: 59  EDIANSLSISGI-ERIE-AVNGYINFFMNYPDFSKETVSKITSEKENFGKLEKRGEKVIL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  SANP GP H+GH R  V+GD+L  ++  SGY+V  +YY+ND G Q   +        
Sbjct: 117 EHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVETQYYVNDMGRQEAIVVFGNERFE 176

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK-------YSSELLNFPEEKWLPIVKDYSV 238
                  D  + E Y     L    +EL  +       Y S      E +     K+ +V
Sbjct: 177 LDKSKKADHAIGEVYVETNKLLAENEELEQEILNLMKNYESACEAGIENELTEKFKN-AV 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +   ++ L  LNI HD F+ E +F +     +RD+I  L   G V E  +       
Sbjct: 236 DYSLGGFKETLSTLNIYHDKFVWESEFVK--SGMVRDVIKRLMDTGKVVEDEVFR----- 288

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                          +  G +    L + +G+  Y   D+AY   K E   D  + ++G+
Sbjct: 289 ------------LDLSDYGLEKKLVLARLNGTSLYSTRDIAYHINKME-NCDFAVNLLGA 335

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH      +    A +   +A   V+  E + L        MS R G FI++  + +E  
Sbjct: 336 DHKLTAVLVNKTLALLGYNEA--EVVFYEFISLPEG----SMSTRRGRFISMDELFEEAK 389

Query: 419 ---------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                        +VR+ ++     + + F + +  +  K    
Sbjct: 390 SRAAEEVRKRGVAQSEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWDEALDFEKVGC- 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+ARC  I    ++I  D  F            E + +E  ++  L++ P+++E 
Sbjct: 449 PVIQYAHARCSRILENVENISNDNLFAY----------EMNENEKTIVKLLSKLPKIVEK 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   ++P  +A Y+ D+A  F+  +++         ++  N  +   RL +V    +++ 
Sbjct: 499 AAEVRKPQIVANYVLDVAQGFNKFYANC------PVLKEENETIKNSRLAIVSTTKTVLE 552

Query: 572 SGLNIIGVESPNEM 585
           + L+++G+E P +M
Sbjct: 553 NTLDLLGIEMPGKM 566


>gi|145592712|ref|YP_001157009.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145302049|gb|ABP52631.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 572

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 128/616 (20%), Positives = 232/616 (37%), Gaps = 81/616 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + L + L      +  E+           R   H     +AA+ L+R LG  P  IA
Sbjct: 2   DLETLLADRLAPAFSAVAGERVDPAV------RRSQHADYQCDAALSLARRLGRRPRDIA 55

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             ++ ++++     +V ++G GFINL ++ S L   L S   +    G         V +
Sbjct: 56  AEVLGQVELADLCSAVTVSGPGFINLTVADSAL-GTLLSTAAADTRLGIARSAATDTVVV 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WR 184
           ++ + N    MHVGH R  V+GD    L+ + G++V +  ++ D G     L   +    
Sbjct: 115 DYSAPNVAKEMHVGHLRSTVIGDAAVRLLEWRGHQVIKANHLGDWGTPFGMLIEHLLDLG 174

Query: 185 YQQALYNNDSDLPEGYYPGV---YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             +A         + +Y      +    G     +     L   +E  L + +      +
Sbjct: 175 ESEAADELSVGDLDSFYKAARATFDTDDGFRERARRRVVALQRGDELTLRLWRQ-----L 229

Query: 242 MKIIRDDLKALNIQHDIFISEDDF--HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +         +  Q  + ++E DF         +  + D L R G + E           
Sbjct: 230 VAESEKYFLTVYDQLGVLLTEQDFCGESYYNDRLAPVTDELDRLGLLRES---------- 279

Query: 300 QKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
                     +F +   G D   +   + K DG Y Y A DLA  + + +  G   ++YV
Sbjct: 280 -----GDAACVFPAGFAGRDGQPLPIIVRKRDGGYGYGATDLAAIRHRTQCLGATRLLYV 334

Query: 356 MGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRDGMPIKMS------- 401
           +G     + + + AVA            +      +L    ++ R      +        
Sbjct: 335 VGLPQRQHFELVYAVARQAGWLRSPARAEHLGFGSILGSDGKMLRSRTGDSIKLVGLLDE 394

Query: 402 --KRAGDFITLR----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              RA +    +           V   VG  ++++  L    ++   FD+ ++      N
Sbjct: 395 AVTRAAELARQKNPDLSATEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLD-GN 453

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+AR RSIFR+A+       F   P  +  Q      +E  L + LA +  V+
Sbjct: 454 TAPYLQYAHARIRSIFRRAEIEQ----FIPAPITIRHQ------AEHALALELAGFGAVV 503

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            N     + ++LA YL+ LA+ F G +           ++A +  +   RL L    A +
Sbjct: 504 ANVEQTLQFHRLAGYLHTLATTFSGFYEAC------PVLRAED-AVRDSRLALCDLTARV 556

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++G+ +P+ M
Sbjct: 557 LRQGLYLLGIATPDRM 572


>gi|195457058|ref|XP_002075407.1| GK15297 [Drosophila willistoni]
 gi|194171492|gb|EDW86393.1| GK15297 [Drosophila willistoni]
          Length = 649

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 112/589 (19%), Positives = 226/589 (38%), Gaps = 85/589 (14%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-----L 59
            D  S +++    +   I      L    +        G    N AM L++ L       
Sbjct: 85  DDSLSIIEHLRSVLAIAITTAFPQLSHTPVLLTPSIKFGDYQCNNAMALAKKLKDIGIGK 144

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A  ++    + P +  + +AG GFIN++L+  Y  + ++ ++ +G++  +     
Sbjct: 145 SPRDVATELINSCPVSPRIGKLEVAGPGFINIFLNKDYGVRAITDLLRNGVKPPK---VP 201

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +V ++F S N    MHVGH R  ++G+++  L+ F  ++V R  ++ D G Q   L  
Sbjct: 202 KKRVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFLQHDVIRINHLGDWGTQFGMLIA 261

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--- 236
            +  R+   L  +    P G     Y +      + K   E   F +  +  +V      
Sbjct: 262 HLEDRFPNFLNESP---PIGDLQAFYKE------SKKRFDEDEVFKKRAYNAVVALQGGD 312

Query: 237 -----SVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEG 289
                + Q +  + R + K +  + +I + E    F++   S +  ++D L +Q  +   
Sbjct: 313 PNSIKAWQLICDVSRKEFKTIYDRLEINVKERGESFYQ---SRMLTVVDFLRKQNML--- 366

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG- 348
                      + D  R+ +    +  G  +   ++KSDG +TY  +D+A  + + E   
Sbjct: 367 -----------EVDDGREIMWPDESKTG--IPLTIVKSDGGFTYDTSDMAAIRHRIEEEL 413

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--LLCELVRLYRDGMPIKMSKRAGD 406
            D ++YV+ S  S +   +   A      + +++    +   V L  DG   K   R+GD
Sbjct: 414 CDWLVYVVDSGQSTHFATIFKAAKRCGIFQPKVHRADHVQFGVVLGEDGK--KFKTRSGD 471

Query: 407 FITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDF 437
            + L  ++DE                             V    +++  L         F
Sbjct: 472 TVKLADLLDEGMKRSLEQLRSRGRDQVLTPQELLDAQEAVAYGCIKYTDLCHNRISDYVF 531

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            F K+ +  + N   Y+ Y Y R  SI R + + F +L   L   ++    +     E +
Sbjct: 532 SFDKMLD-DRGNTAVYLLYTYTRICSIARNSGEDFSNLSKILETIDI----TLTHDKEWK 586

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           L+  L +   V+   +     + L  + Y++ + F   +       + +
Sbjct: 587 LVSTLLKLHDVLVKCSRDLFLHFLCEFCYEVCTAFAEFYDSCYCIEKNK 635


>gi|71892230|ref|YP_277963.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|109894973|sp|Q492L0|SYR_BLOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|71796336|gb|AAZ41087.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 581

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 120/622 (19%), Positives = 246/622 (39%), Gaps = 78/622 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      ++   L  I       +     I +++      G+   N  + +S+ L + 
Sbjct: 1   MNIQKFLLKKIHRALLAI-----TNESFFHLIQVQQSTKRKFGNYQINGLIAISKKLNIP 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
               A+  +  I ++    ++ I   GFIN++L+  ++   +++I  +   +        
Sbjct: 56  IEEFAKKFIQFINLNDVAHTIKIEKPGFINIFLNTKWISNQINNIFSA--SHLGITPATP 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++   N    MHVGH R  V+GD++A +++F G+ V R  +I D G Q   L   
Sbjct: 114 KTIVIDYSGPNVAKEMHVGHLRSTVIGDSIARVLSFLGHNVIRANHIGDWGTQFGMLIAY 173

Query: 181 VFWRYQQALYNNDS---DLPEGYYPGVYLK-HVGKELADKYSSELLNF--PEEKWLPIVK 234
           +    Q     N +      E +Y     K  +  + A+   + +L     ++ +  I K
Sbjct: 174 IEKNAQTRFLLNKTIQLSTLEHFYREAKKKYDIDPDFAELSRNYVLKLQKGDKHYRQIWK 233

Query: 235 DYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                +++      ++  +N++    I E  ++      + DI+ +L  +G         
Sbjct: 234 YLVDISILNNQDIYVRLNINLKKSDIIGESFYN----DMLPDIVSDLKNKGLA------- 282

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
             S       ++          +G      + K DG+Y Y   D+A  K + +    D +
Sbjct: 283 VTSNGATVVFLENYH-----NKLGTPFGVIIQKKDGAYLYSTTDIACIKYRCKVLHADRI 337

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           IY + S    ++ +   +A       K   +   +C ++ L +DG P K   RAG+ + L
Sbjct: 338 IYYIDSRQKQHLIQAWEIADKAGYIEKSVLLEHHMCGML-LGKDGKPFK--TRAGNALKL 394

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
           + ++DE                           +   ++++  L +       FD+  + 
Sbjct: 395 KTLLDEALERARCLILSKNPNLKYTEINKLAHIISIGAIKYSELSKNRITDYIFDWNNML 454

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   YVQYA  R  +IF+++K            +N I  E+E    E+ L + L 
Sbjct: 455 NF-EGNTAPYVQYACTRIFAIFKRSKQPNFQ-----LKKNDIQLETE---EEILLAICLL 505

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++  +I   +    P+ L  YLY L+ +F   + +         ++A+N  +   RL+L 
Sbjct: 506 QFEEMIVAVSNQGAPHILCSYLYKLSVLFSSFYENC------PIIKAHNTHIKYSRLKLA 559

Query: 564 HAVASIINSGLNIIGVESPNEM 585
                 + +GLN++G+++   M
Sbjct: 560 LITMRTLKTGLNLLGIKTVRYM 581


>gi|270295355|ref|ZP_06201556.1| arginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274602|gb|EFA20463.1| arginyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 605

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 128/647 (19%), Positives = 248/647 (38%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S +   LK +      +     ++ +++ +    GHL T       R     
Sbjct: 1   MNIEQKLVSSVIGGLKAL----YGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    + F   KGF+NL ++ S   ++L+ I          +    
Sbjct: 56  PEQTAQEIGEYLQANEPSVAAFNVIKGFLNLTIASSAWIELLNGIHADKQYGIVAVTDNS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN---------- 223
            + +Y        S     +  G Y        K   KEL  K+ SE +N          
Sbjct: 176 -WQKYGNGETPESSGKKGDHLIGDYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAEA 234

Query: 224 ---FPEEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+A+ K +         +  + + +  D    E + +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYAGFDETYRMMGVTFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYRK---------------EDGSVWADLTGEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMAEMIDTAKETSNELGKLDGLTKEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+AK+   ++   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGIEI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +P   E    E  LI  +A++  +++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PAQLPAGIELSEKEEGLIQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREENEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|255348827|ref|ZP_05380834.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503367|ref|ZP_05381757.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507045|ref|ZP_05382684.1| arginyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525499|emb|CBJ14976.1| arginyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435055|gb|ADH17233.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438775|gb|ADH20928.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 563

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 136/598 (22%), Positives = 223/598 (37%), Gaps = 95/598 (15%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++E+  LD   I        GH   N AM L+R L   P  IAE IVA I   P   S+ 
Sbjct: 22  ELEELTLD---ITPSTKEHFGHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIE 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN   S  +L   L +         R       KV I+F S N    MHVGH R
Sbjct: 78  IAGAGFINFTFSKEFLASQLQTFSKELANGFR--AASPQKVIIDFSSPNIAKDMHVGHLR 135

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD LA   +F G++V R  +I D G     L   +    Q+A++  +         
Sbjct: 136 STIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYLQETSQEAIHQLE--------- 186

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-IS 261
                    +L   Y      F E+      K  S   ++ +   D +AL +   I  +S
Sbjct: 187 ---------DLTALYKKAHARFAED---SEFKKRSQHNVVALQSGDAQALALWKQICSVS 234

Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMV 316
           E  F       I  I+D  L  +G  +            +  ++    D  + +F     
Sbjct: 235 EKSFQ-----TIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCVF---HE 286

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS 375
              +   + KSDG Y Y   D+A  + + ++   D ++ V  S  S + + LEA   A  
Sbjct: 287 AFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAG 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------- 415
              ++  +       L  D    K   R+G+ I LR ++D                    
Sbjct: 347 YLPSK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEE 405

Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   +G +++++  L         F F K+  + + N    + YAY R + I R+ 
Sbjct: 406 DLAYQGPILGINAIKYADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRM 464

Query: 469 KDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                           +PQE      + +E  L + L  +P +++       P+ L  YL
Sbjct: 465 G------------LESLPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYL 512

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y L + F+  +                      RL L       +++G++++G+++ N
Sbjct: 513 YALTNKFNTFFRDCHI---------EGSDSQQERLYLCGLTERTLSTGMHLLGLKTLN 561


>gi|296435982|gb|ADH18156.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437843|gb|ADH20004.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140343|gb|ADH97101.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 563

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 135/595 (22%), Positives = 221/595 (37%), Gaps = 89/595 (14%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++E+  LD   I        GH   N AM L+R L   P  IAE IVA I   P   S+ 
Sbjct: 22  ELEELTLD---ITPSTKEHFGHYQCNDAMKLARVLHKSPRAIAESIVAHIPPTP-FSSIE 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN   S  +L   L +         R       KV I+F S N    MHVGH R
Sbjct: 78  IAGAGFINFTFSKEFLASQLQTFSKELANGFR--AASPQKVIIDFSSPNIAKDMHVGHLR 135

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD LA   +F G++V R  +I D G     L   +    Q+A++  +         
Sbjct: 136 STIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYLQETSQEAIHQLE--------- 186

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-IS 261
                    +L   Y      F E+      K  S   ++ +   D +AL +   I  +S
Sbjct: 187 ---------DLTALYKKAHARFAED---SEFKKRSQHNVVALQSGDAQALALWKQICSVS 234

Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMV 316
           E  F       I  I+D  L  +G  +            +  ++    D  + +F     
Sbjct: 235 EKSFQ-----TIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCVF---HE 286

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS 375
              +   + KSDG Y Y   D+A  + + ++   D ++ V  S  S + + LEA   A  
Sbjct: 287 AFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAG 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------- 415
              ++  +       L  D    K   R+G+ I LR ++D                    
Sbjct: 347 YLPSK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEE 405

Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   +G +++++  L         F F K+  + + N    + YAY R + I R+ 
Sbjct: 406 ELAYQGPILGINAIKYADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRM 464

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
               P  +  L              +E  L + L  +P +++       P+ L  YLY L
Sbjct: 465 GLESPPQEGPLAVHG---------PAEEALALTLLRFPEILDLTLRELCPHFLTDYLYAL 515

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
            + F+  +                      RL L       +++G++++G+++ N
Sbjct: 516 TNKFNAFFRDCHI---------EGSDSQQERLYLCGLTERTLSTGMHLLGLKTLN 561


>gi|166154668|ref|YP_001654786.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155543|ref|YP_001653798.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335938|ref|ZP_07224182.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|165930656|emb|CAP04153.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931531|emb|CAP07107.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 563

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 136/598 (22%), Positives = 223/598 (37%), Gaps = 95/598 (15%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++E+  LD   I        GH   N AM L+R L   P  IAE IVA I   P   S+ 
Sbjct: 22  ELEELTLD---ITPSTKEHFGHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIE 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN   S  +L   L +         R       KV I+F S N    MHVGH R
Sbjct: 78  IAGAGFINFTFSKEFLASQLQTFSKELANGFR--AASPQKVIIDFSSPNIAKDMHVGHLR 135

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD LA   +F G++V R  +I D G     L   +    Q+A++  +         
Sbjct: 136 STIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYLQETSQEAIHQLE--------- 186

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-IS 261
                    +L   Y      F E+      K  S   ++ +   D +AL +   I  +S
Sbjct: 187 ---------DLTALYKKAHARFAED---SEFKKRSQHNVVALQSGDAQALALWKQICSVS 234

Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMV 316
           E  F       I  I+D  L  +G  +            +  ++    D  + +F     
Sbjct: 235 EKSFQ-----TIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCVF---HE 286

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS 375
              +   + KSDG Y Y   D+A  + + ++   D ++ V  S  S + + LEA   A  
Sbjct: 287 AFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAG 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------- 415
              ++  +       L  D    K   R+G+ I LR ++D                    
Sbjct: 347 YLPSK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEE 405

Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   +G +++++  L         F F K+  + + N    + YAY R + I R+ 
Sbjct: 406 ELAYQGPILGINAIKYADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRM 464

Query: 469 KDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                           +PQE      + +E  L + L  +P +++       P+ L  YL
Sbjct: 465 G------------LESLPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYL 512

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y L + F+  +                      RL L       +++G++++G+++ N
Sbjct: 513 YALTNKFNTFFRDCHI---------EGSDSQQERLYLCGLTERTLSTGMHLLGLKTLN 561


>gi|296424987|ref|XP_002842025.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638282|emb|CAZ86216.1| unnamed protein product [Tuber melanosporum]
          Length = 633

 Score =  353 bits (907), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 238/619 (38%), Gaps = 86/619 (13%)

Query: 14  YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
           Y+  +   I   +  L    +E  ++   G L   AA  L R  G +P  + +    +  
Sbjct: 54  YIAHVLAPITGVELELVYPALEWTQNLEKGDL-ILAAPRL-RIPGKNPSELTKEWAEKFP 111

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANP 132
            +P V S   AG  F+  Y     L K++ S ++S    YG    GKG +V +EF S N 
Sbjct: 112 ENPYVRSPTAAGT-FLQFYFKKDVLSKLVLSSILSRKSAYGPIDTGKGKRVIVEFSSPNI 170

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--FWRYQQALY 190
             P H GH R  ++G  L++L    G++V R  Y+ D G Q   L +    F   ++ L 
Sbjct: 171 AKPFHAGHLRSTIIGGFLSNLYESCGWDVIRMNYLGDWGKQFGILGVGYKRFGSEEKLLE 230

Query: 191 NNDSDLPEGYYPGVYLKHVGKE-----LADKYSSELLNFP-EEKWLPIVKD-----YSVQ 239
           +  + L E Y     +    KE      A+K   ++ N P +++ L              
Sbjct: 231 DPINHLFEVYVAINKVVEQEKEAEKNKAAEKGEKQISNGPTDQEALEFFFKMEHGSEECI 290

Query: 240 AMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           AM K  R+            LNI +D++  E    +          +++ R G +   + 
Sbjct: 291 AMWKRFRELSIEKYKATYSRLNISYDVYSGESQVSK----------ESMERAGEMMREMG 340

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
              +S      D            +G      + K DG+  Y   D+     +YE+  FD
Sbjct: 341 ISSESDGAIVVDFKPHA-----KKLGKA---VVQKKDGTTLYLTRDIGAAMERYEKYKFD 392

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRLY 392
            MIYV+      ++++L  +   +    A                     V L +++   
Sbjct: 393 KMIYVVACQQDLHLQQLFMILKLLKLDWADRLTHVNFGMVLGMSSRRGTVVFLDDILADA 452

Query: 393 RDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RD M   M K    +  +     V D VG  +V    +  K      FD  ++    + +
Sbjct: 453 RDKMHEVMRKNEEKYKQVEDPEMVADVVGRTAVMIQDMSGKRINNYTFDMARMTSF-EGD 511

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
              Y+QYA++R  SI R++    P+L   DF L            +   + LI  LA+YP
Sbjct: 512 TGPYLQYAHSRLCSIQRKSGIPIPELLNADFSLLT----------EDHAINLIRCLAQYP 561

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V++N     EP  +  YL+ +  +    +   R       V     +L+  R+ L  + 
Sbjct: 562 DVLQNTLKTLEPTTVVTYLFKMTHLLSSSYDVLR-------VIGEEPRLSAARMALYESA 614

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++N+G+ ++G+     M
Sbjct: 615 RQVLNNGMRLLGLTPVERM 633


>gi|293608014|ref|ZP_06690317.1| predicted protein [Acinetobacter sp. SH024]
 gi|292828587|gb|EFF86949.1| predicted protein [Acinetobacter sp. SH024]
          Length = 594

 Score =  353 bits (907), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 128/624 (20%), Positives = 242/624 (38%), Gaps = 89/624 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +S++ + L+    K  +  +        +           N  + +++ L  +P  +A 
Sbjct: 15  LTSQINSLLQAAFIKAGLPTETA---FSTKSMMTDIADFQCNGVLQVAKSLRKNPFDLAT 71

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  + I P+  +V ++G GFINL LS   L +  S  +        +L+     + I+
Sbjct: 72  TVVNHLLISPEFSNVSVSGPGFINLKLSDEMLNRSASKQLED-PNLNVSLVNNKRCILID 130

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F   N   P+HVGH R  ++G+++  + A  GY +  + ++ D G Q+  L   +  RY 
Sbjct: 131 FGGPNVAKPLHVGHLRSLIIGESVRRIFAIQGYNIISDLHLGDWGLQMGMLISEIEIRYP 190

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA------ 240
                ++ + P      +        L  + S    N PE          ++QA      
Sbjct: 191 NLRCFDELN-PSLSIDSLKCIEELDSLYPEASKACQNDPERMQFARKVTAALQAGHVGYR 249

Query: 241 -MMKIIR--------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            + + +R         D++ LN   D+F+ E D        I ++I +L  +G   E   
Sbjct: 250 LLWEKLRSISLSKQLKDMELLNAHFDLFLGESDVQP----LIPEMIQSLRSKGIAKES-- 303

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ER 347
                         +  L+   +   D    P   L KSDGS  Y   DLA    +Y + 
Sbjct: 304 --------------QGALIIDVSEETDKKPMPPLILEKSDGSALYATTDLATVLDRYIKF 349

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++++YV+    S + +++          K+   + +        DG P K   R G  
Sbjct: 350 QPESILYVVDQRQSLHFEQVFRAVRVADYAKSTKLIHIGFGTVNGVDGKPYK--TRDGGV 407

Query: 408 ITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             L  +++E                          VG  +++F  L         FD  +
Sbjct: 408 ARLSDLLEEAIQKAKSRIALRSETTGEESELLARKVGLAAIKFADLDSHRQSGYIFDAER 467

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +    +     YVQYA  R  SI ++A++      +     N+I      + +E +L++ 
Sbjct: 468 LVSF-EGRTGPYVQYACVRISSILKKAEEYG----WSKGDINII------EPAERELVIE 516

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
            A +P  I + +    P ++  Y+++LA VFH  +           + ANN ++   R+ 
Sbjct: 517 CARFPDYILSVSSTYAPNEITNYVFNLAQVFHRFYKEC------SVMNANNDEIRSSRIS 570

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L     ++++ GL ++G+E P  M
Sbjct: 571 LCMLAHAVLSRGLWLLGIEVPTRM 594


>gi|256545516|ref|ZP_05472876.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398727|gb|EEU12344.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 566

 Score =  353 bits (907), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 130/612 (21%), Positives = 244/612 (39%), Gaps = 76/612 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             DF   +   L+E +  +   K+I D  +IE P     G  +      L++ +  +P  
Sbjct: 1   MKDFKEIIAKKLEEKELGLGY-KEIYD--LIEIPPQENMGDFAF-PCFTLAKTMRKNPKL 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTK 122
           IAE + + ++ID   + +      ++N YL        +++ ++    +YG++ +GKG  
Sbjct: 57  IAEEVASSLEIDGV-EKIVNENA-YVNFYLDRQKVTNDVINEVIEKEDDYGKSDMGKGIN 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
             +EF S N   P H+GH R  V+GD + ++  + GY VT   YI D G Q   +  +  
Sbjct: 115 ELVEFSSVNIAKPFHIGHIRSTVIGDVIRNIYEYLGYNVTASNYIGDYGTQFGVMIAAYK 174

Query: 182 FWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSV 238
            W  ++A+  +  ++L   Y      +   +E  +K   E  N    EE+ + + + +  
Sbjct: 175 LWGDKEAIDKDPINELLNLYVRYTKEEEDNEEYQEKARQEFKNLEDGEEEAMRLWQWFKD 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            ++ +  R     L+I++D +  E          +   ++ L  +  + E       S  
Sbjct: 235 LSLREFDRV-YGMLDIKYDNYHGES----YHSQWMPAALEELKEKNLLVE-------SDG 282

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357
               D+    L              L+KS+GS  Y   D+A    ++   G D  IY++G
Sbjct: 283 AYIVDLSEFNL----------PPSMLIKSNGSSAYITRDVATALYRHRTYGLDKNIYIVG 332

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-----------------------VRLYRD 394
           S    + ++L+ +   +  +     VL  +                        +    +
Sbjct: 333 SQQKLHFQQLKKILYLMGHEDVSEEVLHVQFGMVSLKDQVLSTRKGHVVFLEDVLNKTIE 392

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                M  R      L      VG  +V+F  L+    +   FD+ ++     E    YV
Sbjct: 393 KTYSIMKDRDNQIENLDEAAKIVGIGAVKFQELYNSRIKDYVFDWDELLNFEGE-TGPYV 451

Query: 455 QYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
            Y YAR +S+ R+A  + F  ++F          E      E  LI  L  +   I  A 
Sbjct: 452 HYTYARAKSVLRKAGKEEFGQMNF----------EKLNTDEEYSLIKALESFQDAIILAK 501

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A  + ++A  F+  ++  +       +  ++ KL   RL L  A + +I +G
Sbjct: 502 NRLEPSVVARKVMEIAQKFNKFYNSTQ-------ILVDDEKLKEERLALTKATSIVIKNG 554

Query: 574 LNIIGVESPNEM 585
           L I+G+++  +M
Sbjct: 555 LGILGIKTVEQM 566


>gi|291525263|emb|CBK90850.1| arginyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 597

 Score =  353 bits (907), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 116/637 (18%), Positives = 242/637 (37%), Gaps = 95/637 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                + +   + +       ++K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKLINLISEEVTKAFVSAGYDEKYGKVTLSNRPDLCE---FQCNGAMAAAKEYKCAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I++ + A ++ D   +SV     GF+N+ +  ++L K ++ +      YG     K   +
Sbjct: 58  ISDKVAALLESDEMFESVESVKPGFLNIKMDTAFLAKYMNDMKDDEGRYGLEKAKKPLTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++   N   P+HVGH R AV+G+++  +  F G+ V  + ++ D G Q+  +   +  
Sbjct: 118 VVDYGGPNVAKPLHVGHLRSAVIGESVKRIAKFMGHNVIGDVHLGDWGLQMGLIITELRE 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV----- 238
           R    +Y ++S      Y G Y K     +++          + K     K+ ++     
Sbjct: 178 RKPDLVYFDES------YTGEYPKEAPFTISELEDIYPTASGKSKSDESFKEAALLATKE 231

Query: 239 --------QAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                   QA++  I        + + + LN+  +++  E D        + ++++ +  
Sbjct: 232 LQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFELWKGESDAQPY----VPEMVEMMKE 287

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ +        S+     D+         T   +     +LKSDG+  Y   DLA   
Sbjct: 288 KGFAH-------MSEGALVVDVKE------DTDTKEIPPCIILKSDGASLYSTTDLATLV 334

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKM 400
            +  E   D +IY+  +  S +  ++   A            V +       +DG P K 
Sbjct: 335 MRMKENNPDRVIYLADARQSMHFIQVFRCARKTGIVPDTTELVHIGFGTMNGKDGKPFK- 393

Query: 401 SKRAGDFITLRHVVDE--------------------------------VGSDSVRFMMLW 428
             R G  + L +++ E                                V   +V++  L 
Sbjct: 394 -TRDGGVMRLEYLLKEIDDEMLNKIKENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLS 452

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            + S+   FD  +     + N   Y+ Y   R +SI  + +      D       ++P  
Sbjct: 453 NQASKDYIFDIDRFTSF-EGNTGPYILYTIVRIKSILSKYEAKGG--DISALKDAIMPA- 508

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              +  +  L++ LA++   IE+A     P+K+  Y+Y+LA+ F+G +         + +
Sbjct: 509 --VNAGQKNLMLSLAKFNATIESAYEESAPHKICAYIYELANAFNGFYHD------TKIL 560

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N +L    + L+     I+ + ++++G  +P+ M
Sbjct: 561 SEENEELKKSYISLLVLTKEILEACIDMLGFSAPDRM 597


>gi|29348238|ref|NP_811741.1| arginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569396|ref|ZP_04846806.1| arginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|38372519|sp|Q8A3X5|SYR_BACTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29340141|gb|AAO77935.1| arginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841415|gb|EES69496.1| arginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 597

 Score =  353 bits (906), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 122/639 (19%), Positives = 247/639 (38%), Gaps = 96/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + N LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVINGLKAL-YGQEVPEKM---VQLQKTKKEFEGHL-TLVVFPFLKMSRKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQSDEEYGLVKATETS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G  V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNRVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-- 234
            + +Y        +     +  G Y     KH   ELA+     +     E   P+++  
Sbjct: 176 -WKKYGNGETPESTGKKGDHLVGDYYVSFDKHYKAELAELMEKGMTKEEAEAASPLMQEA 234

Query: 235 ----------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V+A+ +++         +  + + +  D    E + +       ++ 
Sbjct: 235 REMLVKWEAGDPEVRALWEMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEG----KEK 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     +G+ ++                +   +    T  G D  + LL+ DG+  Y   
Sbjct: 291 VMEGLEKGFFFKK---------------EDGSVWVDLTAEGLD-HKLLLRGDGTSVYMTQ 334

Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G
Sbjct: 335 DIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEG 394

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    +++E                             VG  ++++ +
Sbjct: 395 ---KMKSREGTVVDADDLMEEMVSTAKETSQELGKLDGLTQEEADDIARIVGLGALKYFI 451

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  K       N   ++QY YAR +S+ R+A +    +         IP
Sbjct: 452 LKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI------PEQIP 504

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
              E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +          
Sbjct: 505 AGIELSEKEEGLIQLVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FS 558

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  N  + + R+ L   VA ++  G+ ++G+E P+ M
Sbjct: 559 ILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPSRM 597


>gi|302755802|ref|XP_002961325.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii]
 gi|300172264|gb|EFJ38864.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii]
          Length = 595

 Score =  353 bits (906), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 126/626 (20%), Positives = 223/626 (35%), Gaps = 90/626 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG----- 58
           F      L    +E       E   ++   +    +   G    N AM +   +      
Sbjct: 14  FDTIRQELSKIARESFQTTLGEWGNVE-PAVAACANPNFGDYQINNAMGIWSTIKGKETE 72

Query: 59  -LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             +P  IA+ I         V++  +AG GFIN+ LS  Y+ K L+ +++ GI+    ++
Sbjct: 73  FRNPREIAQSITRNFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHGIDTWAPVL 132

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               +  ++F S N    MHVGH R  ++GD LA+++ +   EV R  ++ D G Q   L
Sbjct: 133 -PVKRAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGDWGTQFGML 191

Query: 178 ALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPI 232
              +F  +       D    DL   Y          +E   K    ++     + K+   
Sbjct: 192 IEYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEFKAKAQQAVVKLQSGDAKYRAA 251

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            K      +  I R++ + +  +  + + E      +P  I D I  L  +G + E    
Sbjct: 252 WK-----ILCNISRNEFQQVYDRLKVSLEEKGESFYNPY-IPDAIQILRDKGILEES--- 302

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDN 351
                       D   ++F   + G  +    +K DG + Y + DLA    +      + 
Sbjct: 303 ------------DGATVIF---VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEW 347

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGD-F 407
           +IYV       +   L   A        +       +   + L  DG   +   R G   
Sbjct: 348 IIYVTDVGQHQHFDMLFKAAKRAEWLPKEGYPRTQHVGFGLVLGADGK--RFRTRQGTGL 405

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           + L  ++DE                             VG  +V++  L         F 
Sbjct: 406 VRLVDLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRETNYTFS 465

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           F ++ +  + N   Y+ YAYAR RSI R++     +L  +                E  L
Sbjct: 466 FEQMLD-VRGNTAVYLLYAYARIRSIIRKSGKSIDELKENGAIV-------LTHPDERAL 517

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + L ++  V+E+A     P  L  YLY+L+  F   ++  +       V  +  +    
Sbjct: 518 GLFLIQFSEVVEDAVTRLLPNTLCEYLYNLSENFTRFYTSCK-------VNGSPEE--TS 568

Query: 559 RLQLVHAVASIINSGLNIIGVESPNE 584
           RL L  A A ++     ++G+     
Sbjct: 569 RLLLCEATAIVMKQCFKLLGITPLER 594


>gi|238924596|ref|YP_002938112.1| arginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511645|sp|C4ZD15|SYR_EUBR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238876271|gb|ACR75978.1| arginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 597

 Score =  353 bits (906), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 117/637 (18%), Positives = 241/637 (37%), Gaps = 95/637 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                + +   + +       ++K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKLINLISEEVTKAFVSAGYDEKYGKVTLSNRPDLCE---FQCNGAMAAAKEYKCAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I++ + A ++ D   +SV     GF+N+ +  ++L K ++ +      YG     K   +
Sbjct: 58  ISDKVAALLESDEMFESVESVKPGFLNIKMDTAFLAKYMNDMKDDEGRYGLEKAKKPLTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++   N   P+HVGH R AV+G+++  +  F G+ V  + ++ D G Q+  +   +  
Sbjct: 118 VVDYGGPNVAKPLHVGHLRSAVIGESVKRIAKFMGHNVIGDVHLGDWGLQMGLIITELRE 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV----- 238
           R    +Y ++S      Y G Y K     +++          + K     K+ ++     
Sbjct: 178 RKPDLVYFDES------YTGEYPKEAPFTISELEDIYPTASGKSKSDESFKEAALLATKE 231

Query: 239 --------QAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                   QA++  I        + + + LN+  +++  E D     P     +++ +  
Sbjct: 232 LQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFELWKGESDAQPYVPG----MVEMMKE 287

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ +        S+     D+         T   +     +LKSDG+  Y   DLA   
Sbjct: 288 KGFAH-------MSEGALVVDVKE------DTDTKEIPPCIILKSDGASLYSTTDLATLV 334

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKM 400
            +  E   D +IY+  +  S +  ++   A            V +       +DG P K 
Sbjct: 335 MRMKENNPDRVIYLADARQSMHFIQVFRCARKTGIVPDTTELVHIGFGTMNGKDGKPFK- 393

Query: 401 SKRAGDFITLRHVVDE--------------------------------VGSDSVRFMMLW 428
             R G  + L +++ E                                V   +V++  L 
Sbjct: 394 -TRDGGVMRLEYLLKEIDDEMLNKIKENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLS 452

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            + S+   FD  +     + N   Y+ Y   R +SI  + +      D       ++P  
Sbjct: 453 NQASKDYIFDIDRFTSF-EGNTGPYILYTIVRIKSILSKYEAKGG--DISALKDAIMPA- 508

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              +  +  L++ LA++   IE+A     P+K+  Y+Y+LA+ F+G +         + +
Sbjct: 509 --VNAGQKNLMLSLAKFNATIESAYEESAPHKICAYIYELANAFNGFYHD------TKIL 560

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N +L    + L+     I+ + ++++G  +P+ M
Sbjct: 561 SEENEELKKSYISLLVLTKEILEACIDMLGFSAPDRM 597


>gi|237802882|ref|YP_002888076.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274116|emb|CAX10910.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 563

 Score =  353 bits (906), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 139/621 (22%), Positives = 230/621 (37%), Gaps = 98/621 (15%)

Query: 1   MYLFADFSSRL-KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +   F + L    + +   +  +E+  LD   I        GH   N AM L+R L  
Sbjct: 1   MTILLSFLTSLCSAAIHQAFSE--LEELTLD---ITPSTKEHFGHYQCNDAMKLARVLRK 55

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE IVA I   P   S+ IAG GFIN   S  +L   L +         R     
Sbjct: 56  SPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQLQTFSKELANGFR--AAS 112

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV I+F S N    MHVGH R  ++GD LA   +F G++V R  +I D G     L  
Sbjct: 113 PQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLIT 172

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +    Q+A++  +                  +L   Y      F E+      K  S  
Sbjct: 173 YLQETSQEAIHQLE------------------DLTALYKKAHARFAED---SEFKKRSQH 211

Query: 240 AMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSK 297
            ++ +   D +AL +   I  +SE  F       I  I+D  L  +G  +          
Sbjct: 212 NVVALQSGDAQALALWKQICSVSEKSFQ-----TIYSILDVELHTRGESFYNPFLAEVVA 266

Query: 298 TTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNM 352
             +  ++    D  + +F        +   + KSDG Y Y   D+A  + + ++   D +
Sbjct: 267 DLESKNLVTLSDGAKCVF---HEAFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRI 323

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + V  S  S + + LEA   A     ++  +       L  D    K   R+G+ I LR 
Sbjct: 324 LIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLRE 382

Query: 413 VVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++D                            +G +++++  L         F F K+  +
Sbjct: 383 LLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYVFSFEKML-R 441

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHL 502
            + N    + YAY R + I R+                 +PQE      + +E  L + L
Sbjct: 442 FEGNTAMSLLYAYVRIQGIKRRMG------------LESLPQEEPLAIHEPAEEALALTL 489

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +P +++       P+ L  YLY L + F+  +                      RL L
Sbjct: 490 LRFPEILDLTLRELCPHFLTDYLYALTNKFNAFFRDCHI---------EGSDSQQERLYL 540

Query: 563 VHAVASIINSGLNIIGVESPN 583
                  +++G++++G+++ N
Sbjct: 541 CGLTERTLSTGMHLLGLKTLN 561


>gi|219849478|ref|YP_002463911.1| arginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782951|sp|B8G4J9|SYR_CHLAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219543737|gb|ACL25475.1| arginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 574

 Score =  353 bits (906), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 135/613 (22%), Positives = 232/613 (37%), Gaps = 79/613 (12%)

Query: 10  RLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            L+ ++ +I   I    K+  D I I  P+        T      ++ LG+DP  +A  +
Sbjct: 4   ALERFITDIKDAIAATGKVPVDLIEITTPKPNIPAD-RTFVTFKAAKVLGVDPAKLAAEL 62

Query: 69  VARI--KIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNI 125
            A I    D  +  V   G  F+N  L P  L   +L+ I  +G  YG    G G  V I
Sbjct: 63  AATIAPPPDSLIGEVTATGA-FLNFSLHPQRLAAAVLNEIETAGEAYGTVADGAGRTVVI 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ S N    MHVGH R  ++G  L  +    GY V  + ++ D G Q   + L+   RY
Sbjct: 122 DYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFG-IILAAMQRY 180

Query: 186 QQALYNNDSDLPEGY-----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            +     ++ + E       Y          E   +  S  L   + +   +   + V  
Sbjct: 181 GRPQNEGEAAMAELEALYARYNAEMKDDPALEDEARRWSLALERGDPEARSLW-QWCVDL 239

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++  + +   L I+ D    E  +    P  I + +                       
Sbjct: 240 SLRAAQRNYDRLGIRFDYAYGESFYEAMLPGVIEEAL----------RSEAAFRDVDGAV 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359
             ++D+                 + +SDG   Y   D+A  K +  E    ++IYV+ + 
Sbjct: 290 VAELDKLPKF------------IIQRSDGGTVYMTRDIATIKFRLQEFSPSHIIYVVDAR 337

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
              + ++L A+  A+   +    V +   V    DG P  +S + G+ + L  ++D+   
Sbjct: 338 QELHFRQLFAIVRAMGYARDVELVHVPFGVITTPDGQP--LSTKKGNMVYLEALLDDAVA 395

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   VG  +V +  L++     +  D+ ++    + N   
Sbjct: 396 RARALVDAKSADLPLEERAAIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLS-IEGNSAA 454

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QY++ARCRSI R+A D    L                  SE +LI HLA  P  +  A
Sbjct: 455 YLQYSHARCRSILRRAADEGVALAEADLTL-------LTHPSEQRLIRHLARLPEAVREA 507

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P+ +A + Y  A  F   +           ++A    L   RLQLV A A+ + +
Sbjct: 508 GARYAPFVIADWCYTTAREFGIFFEQC------PVLRAETPALRAARLQLVAATANALRN 561

Query: 573 GLNIIGVESPNEM 585
           GL ++G+++P  M
Sbjct: 562 GLALLGIQAPERM 574


>gi|297841275|ref|XP_002888519.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334360|gb|EFH64778.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 590

 Score =  353 bits (905), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 122/615 (19%), Positives = 234/615 (38%), Gaps = 91/615 (14%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD------PLTIAE 66
             L E+  K+ V  +     +IE  +    G    N AM L   +         P  + +
Sbjct: 19  AKLFEVSLKLTVPDEPNVEPLIEPGK---FGDYQCNNAMGLWSFIKGKGTQFRGPPAVGQ 75

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V+S  IAG GF+N+ LS  ++ K + +++V GI+     +    +  ++
Sbjct: 76  ALIKNLPSSEMVESCSIAGPGFVNVVLSAKWIAKSIENMLVDGIDTWAPTL-SVKRAVVD 134

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   +F ++ 
Sbjct: 135 FSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFP 194

Query: 187 Q---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                      DL   Y        +  E  +K    ++    +   P+ +  +   + +
Sbjct: 195 DTDSVTETAIGDLQMFYKKSKLRFDLDPEFKEKAQQAVVRL--QGGDPVYRK-AWAKICE 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           I R++   +  +  + + E      +P  I ++I+ L+ +G V E               
Sbjct: 252 ISRNEFAKVYQRLRVELEEKGESFYNPY-IANVIEELSSKGLVEEN-------------- 296

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
            +  +++F   + G ++   ++KS+G + Y + DL     +  E   + +IY+       
Sbjct: 297 -EGARVIF---VEGFNIPLMVVKSNGGFNYASTDLTALWYRLNEEKAEWIIYLTDLGQQQ 352

Query: 363 YVKRLEAVAAAVSEKKA------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +       A              ++N +   LV    +    +   RA + + L  ++DE
Sbjct: 353 HFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGADNK---RFRTRANEVVRLVDLLDE 409

Query: 417 -----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                                        VG  +++F  L         F F ++    K
Sbjct: 410 AKDRSKAALIERGKDKEWTPEELDQTAEAVGYGALKFADLKTNRLTGYTFSFDQMLN-DK 468

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+ YA+AR  SI R++         D+       + +    +E  L +HL ++  
Sbjct: 469 GDTAVYLLYAHARICSIIRKSG-------KDIDELKRTGKIALDHAAERALGLHLLQFAE 521

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +E A     P  L  YLY L+  F   +S+ +       V  +  +    RL L  A A
Sbjct: 522 TVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-------VNGSAEE--TSRLLLCEATA 572

Query: 568 SIINSGLNIIGVESP 582
            ++     ++G+   
Sbjct: 573 IVMRKCFYLLGITPV 587


>gi|2632103|emb|CAB11467.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 589

 Score =  353 bits (905), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 120/612 (19%), Positives = 228/612 (37%), Gaps = 86/612 (14%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD------PLTIAE 66
             L ++  K+ V  +     +IE  +    G    N AM L   +         P  + +
Sbjct: 19  AKLFDVSLKLTVPDEPNVEPLIEPGK---FGDYQCNNAMGLWSLIKGKGTQFRGPPAVGQ 75

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V+S  IAG GF+N+ LS  ++ K + +++V GI+     +    +  ++
Sbjct: 76  ALIQSLPTSEMVESCSIAGPGFVNVVLSSKWMAKSIENMLVDGIDTWAPTL-SVKRAVVD 134

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   +F ++ 
Sbjct: 135 FSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFP 194

Query: 187 QALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                 +    DL   Y        +  E  +K    ++    +   P+ +  +   + +
Sbjct: 195 DTESVTETAIGDLQVFYRESKLKFDLNPEFKEKAQQAVVRL--QGGDPVYRQ-AWAKICE 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           I R++   +  +  I + E      +P  I ++I+ L+ +G V E               
Sbjct: 252 ISRNEFAKVYKRLRIELEEKGESFYNPY-IANVIEELSSKGLVEES-------------- 296

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
               +++F   + G  +   ++KSDG + Y + DL     +  E   + +IYV       
Sbjct: 297 -KGARVIF---IEGFKIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQ 352

Query: 363 YVKRLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
           +       A               +      L       +   RA + + L  ++DE   
Sbjct: 353 HFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDNKRFRTRAAEVVRLADLLDEAKD 412

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  ++++  L         F F ++    K + 
Sbjct: 413 RSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTNRITGYTFSFDQMLN-DKGDT 471

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YA+AR  SI R++         D+       + +    +E  L +HL ++   +E
Sbjct: 472 AVYLLYAHARICSIIRKSG-------KDIDELKKTGKIALDHAAERALGLHLLQFAETVE 524

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A     P  L  YLY L+  F   +S+ +       V  +  +    RL L    A ++
Sbjct: 525 EACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-------VNGSAEE--TSRLLLCE-TAIVM 574

Query: 571 NSGLNIIGVESP 582
               +++G+   
Sbjct: 575 RKCFHLLGITPV 586


>gi|76789190|ref|YP_328276.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237804804|ref|YP_002888958.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|109894982|sp|Q3KLP4|SYR_CHLTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76167720|gb|AAX50728.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273104|emb|CAX10017.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 563

 Score =  353 bits (905), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 136/598 (22%), Positives = 223/598 (37%), Gaps = 95/598 (15%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           ++E+  LD   I        GH   N AM L+R L   P  IAE IVA I   P   S+ 
Sbjct: 22  ELEELTLD---ITPSTKEHFGHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIE 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           IAG GFIN   S  +L   L +         R       KV I+F S N    MHVGH R
Sbjct: 78  IAGAGFINFTFSKEFLASQLQTFSKELANGFR--AASPQKVIIDFSSPNIAKDMHVGHLR 135

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++GD LA   +F G++V R  +I D G     L   +    Q+A++  +         
Sbjct: 136 STIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYLQETSQEAIHQLE--------- 186

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-IS 261
                    +L   Y      F E+      K  S   ++ +   D +AL +   I  +S
Sbjct: 187 ---------DLTALYKKAHARFAED---SEFKKRSQHNVVALQSGDAQALALWKQICSVS 234

Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMV 316
           E  F       I  I+D  L  +G  +            +  ++    D  + +F     
Sbjct: 235 EKSFQ-----TIYSILDVELHTRGESFYNPFLAEVVADLESKNLVTLSDGAKCVF---HE 286

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS 375
              +   + KSDG Y Y   D+A  + + ++   D ++ V  S  S + + LEA   A  
Sbjct: 287 AFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAG 346

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------- 415
              ++  +       L  D    K   R+G+ I LR ++D                    
Sbjct: 347 YLPSK-GIFSHVGFGLVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEE 405

Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                   +G +++++  L         F F K+  + + N    + YAY R + I R+ 
Sbjct: 406 ELAYQGPILGINAIKYADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRM 464

Query: 469 KDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                           +PQE      + +E  L + L  +P +++       P+ L  YL
Sbjct: 465 G------------LESLPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYL 512

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y L + F+  +                      RL L       +++G++++G+++ N
Sbjct: 513 YALTNKFNAFFRDCHI---------EGSDSQQERLYLCGLTERTLSTGMHLLGLKTLN 561


>gi|150399104|ref|YP_001322871.1| arginyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166232807|sp|A6UP37|SYR_METVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150011807|gb|ABR54259.1| arginyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 569

 Score =  353 bits (905), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 139/604 (23%), Positives = 249/604 (41%), Gaps = 83/604 (13%)

Query: 22  IKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           + +EKK+LD       I ++ P     G  STN A  LS+ L   P  IAE I + + I 
Sbjct: 9   VAIEKKVLDLTGKQIEIRLDEPPSINMGDYSTNIAFRLSKELKKAPKIIAEEITSSLSI- 67

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
           P ++ +  +  G+IN ++  S   K  +  + S  E       K  KV +E  SANP GP
Sbjct: 68  PGIEKIE-SLNGYINFFMDYSVFSKETTLEINSKQENFGKSDLKNKKVILEHTSANPNGP 126

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
            H+GH R  V+GD+L  ++  +GY V  +YY+ND G Q   +              +D  
Sbjct: 127 FHIGHGRNMVIGDSLKRILNAAGYTVETQYYVNDMGRQEAIVVFGNDRFKLDKSKKSDHA 186

Query: 196 LPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           + + Y     L +  +        L   Y   + N  E +     K+ +V+  +   ++ 
Sbjct: 187 IGQTYVEANKLLNENEELEQEILNLMKNYEEAMENGIENEITEKFKN-AVEYALTGFKET 245

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  LNI HD F+ E +F R     +R++I+ L   G V E  +                 
Sbjct: 246 LSTLNIHHDKFVWESEFVR--SGLVRNVINRLMETGKVTEEDVYR--------------- 288

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
                +  G +    L + +G+  Y   D+AY   K E   D  + ++G+DH      + 
Sbjct: 289 --LDLSEFGIEKKLVLARLNGTSLYSTRDVAYHMTKME-NCDFAVNLLGADHKLTGIMVN 345

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---------- 418
              A +   +A   ++  E + L        MS R G FI++  + +E            
Sbjct: 346 KTLALLGYNEA--EIVFYEFISLPEG----SMSTRQGRFISMDELFEEAKLRAREEVKKR 399

Query: 419 -----------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                              +VR+ ++     + + F + +  +  K      +QYA+ARC
Sbjct: 400 EVAKTEEEIEEIAKKIAVGAVRYNIVRISPEKPMVFRWDEALDFEKVGC-PVIQYAHARC 458

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             I    +        +LF       E E   +E  ++  +++ P ++E +   ++P  L
Sbjct: 459 SRILENCEPSGLVNSKNLF-------EYEMAENEKIIVKLISKLPEIVEKSAEVRKPQIL 511

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A Y  +LA  F+  + + R       ++  N  +   R+ +V++   ++ + L+++G+E 
Sbjct: 512 ANYALELAQGFNKFYGNCR------ILKEENETVRNSRIMIVNSTKLVLENSLDLLGIEM 565

Query: 582 PNEM 585
           P +M
Sbjct: 566 PGKM 569


>gi|163847584|ref|YP_001635628.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525439|ref|YP_002569910.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|229558751|sp|A9WEH7|SYR_CHLAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782952|sp|B9LGY2|SYR_CHLSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|163668873|gb|ABY35239.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449318|gb|ACM53584.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 574

 Score =  353 bits (905), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 129/612 (21%), Positives = 233/612 (38%), Gaps = 77/612 (12%)

Query: 10  RLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            L+ ++ +I   I    K+  D I I  P+        T      ++ LG+DP+ +A  +
Sbjct: 4   ALERFISDIQAAIVATGKVPADLIEITTPKPNIPAD-RTFVTFKAAKALGVDPVRLAADL 62

Query: 69  VARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNI 125
              I    D  +  V   G  F+N  L P  L   + + + + G  YG    G    V I
Sbjct: 63  ATAIVPPPDSLIGEVTATGA-FLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVI 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           ++ S N    MHVGH R  ++G  L  +    GY V  + ++ D G Q   + L+   RY
Sbjct: 122 DYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFG-IILAAMQRY 180

Query: 186 QQALYNNDSDLPE-GYYPGVYLKHVGKE--LADKYSSELLNFPE-EKWLPIVKDYSVQAM 241
            +     ++ + E       Y   +     L D+     L   + +     +  + V   
Sbjct: 181 GRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT 240

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           M+  + +   L ++ D    E  +    P  I + +          +             
Sbjct: 241 MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEAL----------QSGAAFRDVDGAVV 290

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
            ++D+                 + +SDG   Y   D+A  K +  E    ++IYV+ +  
Sbjct: 291 AELDKLPRF------------IVQRSDGGTVYITRDIATIKFRLQEFNPSHIIYVVDARQ 338

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
             + ++L A+  A+        + +   V    DG P  +S + G+ + L  ++D+    
Sbjct: 339 ELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQP--LSTKKGNMVYLESLLDDAVAR 396

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V +  L++     +  D+ ++    + N   Y
Sbjct: 397 ARALVDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLS-IEGNSAAY 455

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY++ARCRSI R+A +        +    V P       SE +L+ HLA  P  +  A 
Sbjct: 456 LQYSHARCRSILRRAAEEG------MLSTEVDP-GLLTHPSEQRLVRHLARLPEAVREAG 508

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +A + Y  A  F   +           ++A    L   RLQLV A A+ + +G
Sbjct: 509 ARYAPFVIADWCYTTAREFGIFFEQC------PVLRAETPALRAARLQLVSATANALRNG 562

Query: 574 LNIIGVESPNEM 585
           L ++G+++P  M
Sbjct: 563 LALLGIQAPERM 574


>gi|317478351|ref|ZP_07937515.1| arginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905510|gb|EFV27300.1| arginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 605

 Score =  353 bits (905), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 128/647 (19%), Positives = 247/647 (38%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S +   LK +      +     ++ +++ +    GHL T       R     
Sbjct: 1   MNIEQKLVSSVIGGLKAL----YGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    + F   KGF+NL ++ S   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLQANEPSVAAFNVIKGFLNLTIASSAWIELLNGIHADKQYGIVAATDNS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN---------- 223
            + +Y        S     +  G Y        K   KEL  K+ SE +N          
Sbjct: 176 -WQKYGNGETPESSGKKGDHLIGDYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAEA 234

Query: 224 ---FPEEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+A+ K +         +  + + +  D    E + +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYAGFDETYRMMGVTFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYRK---------------EDGSVWADLTGEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMAEMIDTAKETSNELGKLDGLTKEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+AK+   ++   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGLEI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +P   E    E  LI  +A++  +++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PAQLPVGIELSEKEEGLIQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREENEAVKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|262196660|ref|YP_003267869.1| arginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080007|gb|ACY15976.1| arginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 580

 Score =  352 bits (904), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 121/594 (20%), Positives = 217/594 (36%), Gaps = 78/594 (13%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
            +   +  P     G  +       ++ LG  P  +A  +  R      +  V   G  F
Sbjct: 28  PELFAVTAPPRPELGDFAV-GCFPAAKALGQPPPKLAAQVAERFAPGEYLSEVKATGP-F 85

Query: 89  INLYLSPSYLRKILSSI--VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +N   + +     L        G     +  G G  V I++ S N +  +   H R  V+
Sbjct: 86  VNFRANRASALHFLRDATLAADGPALIPSSPGAGKTVCIDYSSPNISKHLAYHHIRSTVI 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G  L +L   +GY V    ++ D G     L  +       A +     L       +Y+
Sbjct: 146 GHALVNLHRAAGYRVVGINHLGDWGTTHGMLLAA------HARWGAPEPLTVDGLNALYV 199

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISED 263
           +   KE+AD      L     +W   ++D   +A     +            + I   E 
Sbjct: 200 RF-RKEMAD---DPTLEEEGRRWFKKLEDGDAEARALWQRFREVSWAEFEHVYRILGIEF 255

Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           +  RG+      I  ++  L  +G        P  S+      ++   +           
Sbjct: 256 EDVRGESAYEDAIAGVLAMLEERGL-------PTVSEGALVVPLEDAGM----------P 298

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              L K DG+  Y   DLA    +++   F   +YV+    S + ++L  V        A
Sbjct: 299 PLLLRKQDGATLYGTRDLAAAIYRHDTYDFARSLYVVDRGQSLHFRQLFEVLRRAGCDWA 358

Query: 380 -QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            +   +   +VR+       K   R G+ + L+ V+ E                      
Sbjct: 359 ERCEHVPFGVVRVG----GKKTGTRTGNVVLLKEVLAEAEQRAADVVRENNPEMTGEAAA 414

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V F  L  +  + +DF + +V   S ++   YVQYA+ARC SI R+A++ 
Sbjct: 415 ETARMVGVGAVVFANLASQREKDVDFAWEQVLSVSGDS-GPYVQYAHARCASILRKAEER 473

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                  L P   +   +    +E  L   L +    +  A    EP+ L+ YL DL + 
Sbjct: 474 G------LTPGAEVDLSALSHETEWALARKLLDLGETVHRAAENNEPHLLSRYLLDLCAA 527

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F   ++ G ++  LR +  ++  +   R+ LV     ++  GL ++G+E+P++M
Sbjct: 528 FSRWYTAGNQDKSLRAL-VDDDAVARARITLVAIAGRVLARGLGLLGIEAPSDM 580


>gi|167763757|ref|ZP_02435884.1| hypothetical protein BACSTE_02137 [Bacteroides stercoris ATCC
           43183]
 gi|167697873|gb|EDS14452.1| hypothetical protein BACSTE_02137 [Bacteroides stercoris ATCC
           43183]
          Length = 605

 Score =  352 bits (904), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 119/647 (18%), Positives = 237/647 (36%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L   +      +  +     +I +++ +    GHL T       R     
Sbjct: 1   MNI----EQKLVASVMSGLKALYGQDVPAAQIQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    S F   KGF+NL ++ S   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLQANEPSVSAFNVIKGFLNLTIASSAWIELLNGIHADAKYGIVAATDNA 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA++++ +G  V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIISANGNRVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--------------- 225
            + +Y        S     +  G Y     K    +    +  F                
Sbjct: 176 -WQKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQSEGMSEEEAKAKAEA 234

Query: 226 -----EEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+ + K +         +  + + +  D    E + +  
Sbjct: 235 ESPLMKEAREMLVKWEAGDPEVRTLWKKMNDWVYAGFDETYRMMGVTFDKIYYESETYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYRK---------------EDGSVWADLTGEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D M+YV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADFPIDKMVYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMAEMINTAKETSGELGKLDGLTQEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+AK+    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGISV--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +P   E    E  LI  +A++  +++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PAQLPAGIELSEKEEGLIQMVADFAAIVKQAGEDYSPSLIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREENEAVKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|291529278|emb|CBK94864.1| arginyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 597

 Score =  352 bits (904), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 116/637 (18%), Positives = 240/637 (37%), Gaps = 95/637 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                + +   + +       ++K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKLINLISEEVTKAFVSAGYDEKYGKVTLSNRPDLCE---FQCNGAMAAAKEYKCAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I++ + A ++ D   +SV     GF+N+ +  ++L K ++ +      YG     K   +
Sbjct: 58  ISDKVAALLESDEMFESVESVKPGFLNIKMDTAFLAKYMNDMKDDEGRYGLEKAKKPLTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++   N   P+HVGH R AV+G+++  +  F G+ V  + ++ D G Q+  +   +  
Sbjct: 118 VVDYGGPNVAKPLHVGHLRSAVIGESVKRIAKFMGHNVIGDVHLGDWGLQMGLIITELRE 177

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV----- 238
           R    +Y ++S      Y G Y K     +++          + K     K+ ++     
Sbjct: 178 RKPDLVYFDES------YTGEYPKEAPFTISELEDIYPTASGKSKSDESFKEAALLATKE 231

Query: 239 --------QAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                   QA++  I        + + + LN+  +++  E D           +++ +  
Sbjct: 232 LQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFELWKGESDAQPYVSG----MVEMMKE 287

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ +        S+     D+         T   +     +LKSDG+  Y   DLA   
Sbjct: 288 KGFAH-------MSEGALVVDVKE------DTDTKEIPPCIILKSDGASLYSTTDLATLV 334

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKM 400
            +  E   D +IY+  +  S +  ++   A            V +       +DG P K 
Sbjct: 335 MRMKENNPDRVIYLADARQSMHFIQVFRCARKTGIVPDTTELVHIGFGTMNGKDGKPFK- 393

Query: 401 SKRAGDFITLRHVVDE--------------------------------VGSDSVRFMMLW 428
             R G  + L +++ E                                V   +V++  L 
Sbjct: 394 -TRDGGVMRLEYLLKEIDDEMLNKIKENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLS 452

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            + S+   FD  +     + N   Y+ Y   R +SI  + +      D       ++P  
Sbjct: 453 NQASKDYIFDIDRFTSF-EGNTGPYILYTIVRIKSILSKYEAKGG--DISALKDAIMPA- 508

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              +  +  L++ LA++   IE+A     P+K+  Y+Y+LA+ F+G +         + +
Sbjct: 509 --VNAGQKNLMLSLAKFNATIESAYEESAPHKICAYIYELANAFNGFYHD------TKIL 560

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              N +L    + L+     I+ + ++++G  +P+ M
Sbjct: 561 SEENEELKKSYISLLVLTKEILEACIDMLGFSAPDRM 597


>gi|15616858|ref|NP_240071.1| arginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681613|ref|YP_002467999.1| arginyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471299|ref|ZP_05635298.1| arginyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11182438|sp|Q44683|SYR_BUCAI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782947|sp|B8D940|SYR_BUCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|25293287|pir||E84958 arginine-tRNA ligase (EC 6.1.1.19) [imported] - Buchnera sp.
           (strain APS)
 gi|10038922|dbj|BAB12957.1| arginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624456|gb|ACL30611.1| arginyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311087139|gb|ADP67219.1| arginyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 574

 Score =  352 bits (904), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 122/618 (19%), Positives = 231/618 (37%), Gaps = 77/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     + +K  +++   KI +   I    VI   +    GH   N  + ++    L 
Sbjct: 1   MNL----KNTIKEDIQDALIKIAI---INCDPVITLNKKTKIGHYQLNNLIKIANISNLK 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I+  IK       +  +  GFIN  ++P ++ + L  I +S            
Sbjct: 54  PFELANRIILNIKKKYMYKEITFSQPGFINFLINPYWISEQLEKIFLSPRLG--INHVNA 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MH+GH R  ++GD +A ++ F G+ V R  +I D G Q   L   
Sbjct: 112 QNIVIDYSSPNIAKEMHIGHLRSTIIGDVMARILDFLGHNVIRANHIGDWGTQFGMLIAY 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  +       +   L E Y        + +  A+K    ++     ++    I K    
Sbjct: 172 LEVKKLVNSPLSLMKLEEYYCKAKKKYDIDQLFAEKSREYVVKLQNGDQYCYSIWKKLVS 231

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             M++  +   K L++  +    + E  +++  P+ I D+           +      + 
Sbjct: 232 ITMLENCKI-YKRLHVTLKKKHTMGESIYNKMLPNIIEDL-----------KNKKIAIEK 279

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
             +    +   +       +G+ +   + K D  + Y   D+A  K +Y+    D +IY 
Sbjct: 280 NGSTIVFLKEFK-----NRLGEPMGVVIQKKDKGFLYSTTDIACLKYRYQVLHADRIIYY 334

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             S    ++ +   +A         + +      + L +D  P K   R GD I L  ++
Sbjct: 335 TDSRQHQHLLQAWTIAKKALYISQNLLLEHHIFGMMLSKDKRPFK--TRDGDTIKLSALL 392

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           +G  +V++  L +  +    FD+ ++    +
Sbjct: 393 DEATERAMRLIKNKQPNLSKKKLNQLSNIIGVGAVKYADLSKNRNTNYIFDWNEMLSF-E 451

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  SI +++      L   +F             SE+ L + + E+  
Sbjct: 452 GNTAPYIQYAYTRIVSILKKSNMPIKKLKEKIF---------LTKESEINLAIKILEFEE 502

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           +I   +    P+ L  YLY LA+ F   + +       +       K    RL+L    A
Sbjct: 503 IILLISQKGTPHILCKYLYHLATSFSHFYENCSILFPKKI------KTCKSRLKLSILTA 556

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GLN++G+    +M
Sbjct: 557 KTLKKGLNMLGIRVVKKM 574


>gi|319900803|ref|YP_004160531.1| arginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415834|gb|ADV42945.1| arginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 605

 Score =  352 bits (904), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 123/647 (19%), Positives = 241/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L   +      +  +     ++ +++ +    GHL T       R     
Sbjct: 1   MNI----EQKLVTSVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRLSRKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +  +    + F   KGF+NL ++ S   ++L+ I          +  K 
Sbjct: 56  PEQTAQEIGEYLLANEPSVAAFNVIKGFLNLTVASSAWIELLNGIHAESSYGIVPVTDKS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-------------- 226
            + +Y        S     +  G Y     K    +    +  F +              
Sbjct: 176 -WQKYGGGETPETSGKKGDHLIGDYYVAFDKHYKAEVKELMSEFRDEGMSEEEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +V+    D  V+A+ K +         +  K + +  D    E + +  
Sbjct: 235 ESPLMKEAREMLVRWEANDPEVRALWKKMNDWVYAGFDETYKMMGVTFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYRK---------------EDGSVWADLTGEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMAEMIETAKETSDELGKLDGLTKEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+AK+   ++   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGIEI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +P   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PARLPDGIELSEKEEGLIQMIADFASVVKQAGEDYSPSVIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  L + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREENEALKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|167752086|ref|ZP_02424213.1| hypothetical protein ALIPUT_00328 [Alistipes putredinis DSM 17216]
 gi|167660327|gb|EDS04457.1| hypothetical protein ALIPUT_00328 [Alistipes putredinis DSM 17216]
          Length = 593

 Score =  352 bits (904), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 121/641 (18%), Positives = 226/641 (35%), Gaps = 104/641 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    + ++   +  +             + I++ R    G   T     L +     
Sbjct: 1   MNIEQFLTDKVAAAVSTLYGNAGAP------LQIQKTRKEFEGDY-TLVVFPLLKASRKS 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A  I   +  +      F   KGF+NL L  ++       +  +           G
Sbjct: 54  PEATATEIGEYLVANTPEIKAFNVIKGFLNLSLDSAFWAARFREVAANDTFG--QAAPTG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G ++A ++  +G +V +   +ND G  I    L+
Sbjct: 112 RTVMIEYSSPNTNKPLHLGHIRNNLLGYSVAQILKANGNKVIKVNLVNDRGIHICKSMLA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            +  Y        S +   +  G Y     KH   ++ +  ++       +K  PI++  
Sbjct: 172 -WKLYGGGETPASSGMKGDHLVGKYYVEFDKHYKAQIKELVAAGQSEEEAKKNAPIMRQA 230

Query: 237 SVQAMMKIIRD--------------------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                    +D                      KAL +  D    E   +    S + + 
Sbjct: 231 QEWLRRWEAKDPEIYSLWETMNGWVYEGFDVTYKALGVDFDKVYYESQTYLLGKSLVEEG 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +      G  +                 +   +    T  G D  + LL+ DG+  Y   
Sbjct: 291 LAR----GIFFRK---------------EDGSVWIDLTADGLD-QKLLLRGDGTSVYMTQ 330

Query: 337 DLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYR 393
           DL     ++E    D MIYV+G++ + + + L+ +   +   +    I  L   +V L  
Sbjct: 331 DLGTAFRRFEENRLDEMIYVVGNEQNYHFQVLKLILKKLGYDEWSDHIYHLSYGMVELPE 390

Query: 394 DGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRF 424
                KM  R G  +    ++ +                             VG  ++++
Sbjct: 391 G----KMKSREGTVVDADDLIADMVSTAREMSDELGKLDGCTAQEADAIASMVGLGALKY 446

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + FD  +  +    N   ++QY +AR RSI R+A++   D         +
Sbjct: 447 FILKVDPKKTMLFDPRESIDF-NGNTGPFIQYTHARIRSILRKAEEAGIDFRTQDEAAAL 505

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +P        E++LI  L EYP  ++ A     P  +  Y Y+LA  F+G++        
Sbjct: 506 LP-------EEIELIKALTEYPATVQAAAANFAPSIVGAYAYELAKSFNGYYHDH----- 553

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++        MRL+L   VA  I   + ++G++ P  M
Sbjct: 554 -SILKEECTTTRDMRLRLAEQVARTIRLAMALLGIDVPERM 593


>gi|329964264|ref|ZP_08301365.1| arginine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328525569|gb|EGF52612.1| arginine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 605

 Score =  352 bits (904), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 129/647 (19%), Positives = 242/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L   +      +  +     ++ +++ +    GHL T       R     
Sbjct: 1   MNI----EQKLVTSVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +  +    S F   KGF+NL ++ S   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLLANEPSVSAFNVIKGFLNLTIASSAWIELLNGIHADKQYGIVAATDNS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G  V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNRVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN---------- 223
            + +Y        S     +  G Y        K   KEL  K+  E LN          
Sbjct: 176 -WQKYGNGETPETSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQREGLNEEEAKAKAEA 234

Query: 224 ---FPEEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+A+ K +         +  + + +  D    E + +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYAGFDETYRMMGVTFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYRK---------------EDGSVWADLTGEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMAEMIETAKETSNELGKLDGLTKEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+AK+    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PAQIPANIELSEKEEGLIQMVADFAAVVKQAGEDYSPSVIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 565 ------FSILREENEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|219682170|ref|YP_002468554.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254782948|sp|B8D7E4|SYR_BUCAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219621903|gb|ACL30059.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085983|gb|ADP66065.1| arginyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086558|gb|ADP66639.1| arginyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 574

 Score =  352 bits (904), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 122/618 (19%), Positives = 231/618 (37%), Gaps = 77/618 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     + +K  +++   KI +   I    VI   +    GH   N  + ++    L 
Sbjct: 1   MNL----KNTIKKDIQDALIKIAI---INCDPVITLNKKTKIGHYQLNNLIKIANISNLK 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I+  IK       +  +  GFIN  ++P ++ + L  I +S            
Sbjct: 54  PFELANRIILNIKKKYMYKEITFSQPGFINFLINPYWISEQLEKIFLSPRLG--INHVNA 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MH+GH R  ++GD +A ++ F G+ V R  +I D G Q   L   
Sbjct: 112 QNIVIDYSSPNIAKEMHIGHLRSTIIGDVMARILDFLGHNVIRANHIGDWGTQFGMLIAY 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  +       +   L E Y        + +  A+K    ++     ++    I K    
Sbjct: 172 LEVKKLVNSPLSLMKLEEYYCKAKKKYDIDQLFAEKSREYVVKLQNGDQYCYSIWKKLVS 231

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             M++  +   K L++  +    + E  +++  P+ I D+           +      + 
Sbjct: 232 ITMLENCKI-YKRLHVTLKKKHTMGESIYNKMLPNIIEDL-----------KNKKIAIEK 279

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYV 355
             +    +   +       +G+ +   + K D  + Y   D+A  K +Y+    D +IY 
Sbjct: 280 NGSTIVFLKEFK-----NRLGEPMGVVIQKKDKGFLYSTTDIACLKYRYQVLHADRIIYY 334

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             S    ++ +   +A         + +      + L +D  P K   R GD I L  ++
Sbjct: 335 TDSRQHQHLLQAWTIAKKALYISQNLLLEHHIFGMMLSKDKRPFK--TRDGDTIKLSALL 392

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           +G  +V++  L +  +    FD+ ++    +
Sbjct: 393 DEATERAMRLIKNKQPNLSKKKLNQLSNIIGVGAVKYADLSKNRNTNYIFDWNEMLSF-E 451

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  SI +++      L   +F             SE+ L + + E+  
Sbjct: 452 GNTAPYIQYAYTRIVSILKKSNMPIKKLKEKIF---------LTKESEINLAIKILEFEE 502

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           +I   +    P+ L  YLY LA+ F   + +       +       K    RL+L    A
Sbjct: 503 IILLISQKGTPHILCKYLYHLATSFSHFYENCSILFPKKI------KTCKSRLKLSILTA 556

Query: 568 SIINSGLNIIGVESPNEM 585
             +  GLN++G+    +M
Sbjct: 557 KTLKKGLNMLGIRVVKKM 574


>gi|297831814|ref|XP_002883789.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329629|gb|EFH60048.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 590

 Score =  352 bits (903), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 119/613 (19%), Positives = 227/613 (37%), Gaps = 87/613 (14%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG------LDPLTIAE 66
             L ++  K+ V  +     +IE  +    G    N AM L   +         P  + +
Sbjct: 19  AKLFDVSLKLTVPDEPNVEPLIEPGK---FGDYQCNNAMGLWSIIKGKGTQFKGPPAVGQ 75

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++  +     V+S  IAG GF+N+ LS  ++ K + ++++ GI+     +    +  ++
Sbjct: 76  ALIKSLPTSEMVESCSIAGPGFVNVVLSAKWMAKSIENMLIDGIDTWAPTL-SVKRAVVD 134

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   L   +F ++ 
Sbjct: 135 FSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEFLFEKFP 194

Query: 187 Q---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                      DL   Y        +  E  +K    ++    +   P+ +  +   + +
Sbjct: 195 DTDSVTETAIGDLQMFYKKSKLKFDLDPEFKEKAQQAVVRL--QGGDPVYRK-AWAKICE 251

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           I R++   +  +  + + E      +P  I ++I+ L+ +G V E               
Sbjct: 252 ISRNEFAKVYQRLRVELEEKGESFYNPY-IANVIEELSSKGLVEES-------------- 296

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362
               +++F   + G      ++KSDG + Y + DL     +  E   + +IY+       
Sbjct: 297 -KGARVIF---IEGFKAPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYLTDFGQQQ 352

Query: 363 YVKRLEAVAAAVSE----KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           +       A          K    V       L       +   R+ + + L  ++DE  
Sbjct: 353 HFHMFFKAARKAGWLPDDDKTYPRVNHVGFG-LVLGDDNKRFRTRSTEVVRLVDLLDEAK 411

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  ++++  L         F F ++    K +
Sbjct: 412 DRSKAALIERGKDKEWTPEELDQTAESVGYGALKYADLKTNRLTGYTFSFDQMLN-DKGD 470

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YA+AR  SI R++         D+       + +    +E  L +HL ++   +
Sbjct: 471 TAVYLLYAHARICSIIRKSG-------KDIDELKKTGKIALDHAAERALGLHLLQFAETV 523

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E A     P  L  YLY L+  F   +S  +       V  +  +    RL L  A A +
Sbjct: 524 EEACTTLLPNVLCKYLYYLSEEFTKFYSSCQ-------VNGSAEE--TSRLLLCEATAIV 574

Query: 570 INSGLNIIGVESP 582
           +    +++G+   
Sbjct: 575 MRKCFHLLGITPV 587


>gi|299142422|ref|ZP_07035554.1| arginine--tRNA ligase [Prevotella oris C735]
 gi|298576144|gb|EFI48018.1| arginine--tRNA ligase [Prevotella oris C735]
          Length = 605

 Score =  352 bits (903), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 124/647 (19%), Positives = 238/647 (36%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S + + +K +  +   EK     + +++ R    G+L T       +    +
Sbjct: 1   MNIENAICSSVISVVKGLYGQDVPEK----MVQLQKTRSNFEGNL-TLVVFPFLKISKKN 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +  +    + F   KGF+NL ++      +L+ I        + +I   
Sbjct: 56  PEQTAQEIGEALVKECSAVAAFNVVKGFLNLTVAKEAWIGLLNDINADEKFGEKKVIDNS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVK- 234
            + ++   +    +     +  G +     K         K         EE      K 
Sbjct: 176 -WLKWGNGVTPEQAGKKGDHLIGDFYVAFDKHYRAECETLKAQYMQEGMDEEAAGEKAKT 234

Query: 235 ------------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                             D  V+++ + +         +  KAL +  D    E + +  
Sbjct: 235 EAPLMKEAHEMLVKWEQGDKEVRSLWEKMNNWVYAGFDETYKALGVGFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +D    +G  +                 D   +    T  G D  + LL+SD
Sbjct: 295 GKKKVEEGLD----KGLFFRK---------------DDNSVWADLTNEGLD-QKLLLRSD 334

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------------DEVG 418
            +    +G   KM  R G  +    ++                               VG
Sbjct: 395 GMVELPNG---KMKSREGTVVDADDLIAAMIDDARKTSDELGKFKDMTEEEKQNVARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+AK        +
Sbjct: 452 LGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAKAE------N 504

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           +     +  ++  +  E+QLI  L E+   +E A     P  +A Y Y+L   F+  +  
Sbjct: 505 IAIPTTLSTDAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIANYCYELTKDFNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 565 ------YSILNADTEIEKITRLMLAKNVAKVIKNGMELLGIEVPERM 605


>gi|298386069|ref|ZP_06995626.1| arginine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261297|gb|EFI04164.1| arginine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 597

 Score =  352 bits (903), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 122/639 (19%), Positives = 248/639 (38%), Gaps = 96/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + N LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVINGLKAL-YGQEVPEKM---VQLQKTKKEFEGHL-TLVVFPFLKMSRKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQSDEEYGLVKATETS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-- 234
            + +Y        +     +  G Y     KH   ELA+     +     E   P+++  
Sbjct: 176 -WKKYGNGETPESTGKKGDHLVGDYYVSFDKHYKAELAELMEKGMTKEEAEAASPLMQEA 234

Query: 235 ----------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V+A+ +++         +  + + +  D    E + +       ++ 
Sbjct: 235 REMLVKWEAGDPEVRALWEMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEG----KEK 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     +G+ ++                +   +    T  G D  + LL+ DG+  Y   
Sbjct: 291 VMEGLEKGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVYMTQ 334

Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G
Sbjct: 335 DIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEG 394

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    +++E                             VG  ++++ +
Sbjct: 395 ---KMKSREGTVVDADDLMEEMVSTAKETSQELGKLDGLTQEEADDIARIVGLGALKYFI 451

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  K       N   ++QY YAR +S+ R+A +    +         IP
Sbjct: 452 LKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI------PEQIP 504

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
              E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +          
Sbjct: 505 AGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FS 558

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  N  + + R+ L   VA ++  G+ ++G+E P+ M
Sbjct: 559 ILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPSRM 597


>gi|329956612|ref|ZP_08297185.1| arginine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523984|gb|EGF51060.1| arginine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 605

 Score =  352 bits (903), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 118/631 (18%), Positives = 238/631 (37%), Gaps = 72/631 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      +L   +      +  +     ++ +++ +    GHL T       R     
Sbjct: 1   MNI----EQKLVTSVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ +    S F   KGF+NL ++ S   ++L+ I          +  K 
Sbjct: 56  PEQTAQEIGEYLQANEPSVSAFNVIKGFLNLTIASSAWIELLNGIHADVQYGIAAVTDKS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++  +G  V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIILANGNRVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYS 237
            + +Y        S     +  G Y     K    +    +  F  E   +     +  +
Sbjct: 176 -WQKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQSEGLSEEEAKTRAEA 234

Query: 238 VQAMMKIIRDDLKAL------------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
              +MK  R+ L                +   ++   D+ +R     +    D +  +  
Sbjct: 235 ESPLMKEAREMLVKWEANDPEVRALWKKMNDWVYAGFDETYRM----MGVTFDKIYYESE 290

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCK 344
            Y            +     ++     + + G+ +D + LL++DG+  Y   D+   K +
Sbjct: 291 TYLEGKEKVMEGLEKGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLR 350

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           + +   D M+YV+G++ + + + L  +   +  +  +  V     +    +G   KM  R
Sbjct: 351 FADFPIDKMVYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEG---KMKSR 407

Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434
            G  +    ++ E                             VG  ++++ +L     + 
Sbjct: 408 EGTVVDADDLMAEMINTAKETSGELGKLDGLTKEEADNIARIVGLGALKYFILKVDARKN 467

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F+  K       N   ++QY YAR +S+ R+AK+    +         +P   E    
Sbjct: 468 MTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAKEAGITV------PAQLPAGIELSEK 520

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  LI  +A++  V++ A     P  +A Y YDL   ++  +           ++  N  
Sbjct: 521 EEGLIQMVADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEA 574

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL L   VA ++  G+ ++G+E P+ M
Sbjct: 575 VKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605


>gi|71028762|ref|XP_764024.1| arginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350978|gb|EAN31741.1| arginyl-tRNA synthetase, putative [Theileria parva]
          Length = 629

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/663 (19%), Positives = 247/663 (37%), Gaps = 127/663 (19%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPR-------DCAHGHLSTNAAMILSRPLG----- 58
           ++ Y++E+     + K     IV E  +           G    + A+ L +        
Sbjct: 4   IQQYVRELLSS-AISKCSTSEIVQEFAKHPNVSVAKPKFGDYQWSDALSLFKVAKDHLSV 62

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
             P  +AE++ + I  +    S+ ++ +GF+   LS  ++ + + S+   G    ++   
Sbjct: 63  NSPQELAEMVKSNITSN-SFSSINVSPQGFMTFVLSNDWIEQEIRSLAKYGPSVDKSTKK 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL-----------------------ASLMA 155
            G  V I+F S N    MHVGH R  V+GD+L                       A ++ 
Sbjct: 122 HGETVVIDFSSPNIAKEMHVGHLRSTVIGDSLGTLHNYLTKYLYITLLRRIYLFVARVLE 181

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKEL 213
           F GY+V R  ++ D G Q   L   +F +Y   + N  + SD  + Y        V +E 
Sbjct: 182 FFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFVSNMPSISDFTKFYKEAKLRMDVDEEF 241

Query: 214 ADKYSSELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             K  S ++     ++   +V        +       K L+I+ +IF  E  ++      
Sbjct: 242 KKKSRSRVVKLQSGDEESKLVWKVLCDISLDSFNRIYKRLDIKFEIF-GESFYN----DM 296

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I +I+ +L  +G   E                    L+  +   G  V   L+KSDG + 
Sbjct: 297 IPEIVKDLQDRGIAQES----------------EGALVIFTD--GSPVPLMLVKSDGGFG 338

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVR 390
           Y + D+A  + + +E   D +IYV     S + ++L   A      +  +I+ +   +V+
Sbjct: 339 YDSTDMACLRYRTHELKADWIIYVTDIGQSEHFQKLFKSAQLAGWCENVRIDHVGFGMVQ 398

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFM 425
              + +  K   R+GD + L  ++DE                         +G  SV++ 
Sbjct: 399 ---NELGEKFKTRSGDTVKLVDLLDEAVRRSKLELEKRDPNIPNLDEVAEALGYGSVKYF 455

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL---------- 475
            L    +    F F K+ +  + N   Y+ Y+YAR   IF++A+    D           
Sbjct: 456 DLNHSVTTNYKFSFDKMLD-PRGNTAVYMFYSYARICQIFKKAESKTADGTETNNVETSD 514

Query: 476 --------DFDLFPRNVIPQESEF------DTSELQLIVHLAEYPRVIENATIAQEPYKL 521
                     ++   + +P E +         +E+ L   L ++P +++         +L
Sbjct: 515 NRPVIVEDSVEVNGTSSVPNEVDLSKLVIEHPTEVALAKCLLKFPSILDQIHKDLAINRL 574

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YLY+L+  F   ++  +              L   RL L      ++ +   +IG+  
Sbjct: 575 TDYLYELSVQFSSFYTKCKVVG---------DPLQESRLILCSCTKEVMRTCFQLIGIRP 625

Query: 582 PNE 584
              
Sbjct: 626 LER 628


>gi|156841670|ref|XP_001644207.1| hypothetical protein Kpol_1059p40 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114844|gb|EDO16349.1| hypothetical protein Kpol_1059p40 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 649

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 139/619 (22%), Positives = 243/619 (39%), Gaps = 80/619 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++NY+ +   KI    + L    +E       G L      +  R  G +P  +A
Sbjct: 72  NVVDLMRNYITQELSKISGVDEKLIFPALEWTNTMERGDLLIPIPRL--RIKGANPKDLA 129

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVN 124
           E   ++      ++ V   G  FI  +  P +L +++   I+    EYG   + +  +V 
Sbjct: 130 EEWSSKFPCGDFLEKVEANGP-FIQFFFKPDFLFRVVVPDILTRKEEYGSCKLVENKRVI 188

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF S N   P H GH R  ++G  +A+L    G+EV R  Y+ D G Q   LA+  F R
Sbjct: 189 LEFSSPNIAKPFHAGHLRSTIIGGFIANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FER 247

Query: 185 YQQALYNNDSDLPEGYYPGVYL---KHVGKE------------LADKYSSELLNFPEEKW 229
           Y     +  +  P  +   VY+   K + +E             A +Y   + +  EE  
Sbjct: 248 Y--GSEDALAKDPIHHLFEVYVKINKDIEEEGDSLPLEESTNGKAREYFKRMEDGDEEA- 304

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L I K +   ++ K I D    LNI++D++  E    +     +   I+    +G  +E 
Sbjct: 305 LKIWKRFRELSIEKYI-DTYARLNIKYDVYSGESQVSK---DSMNKAIEIFNEKGLTHE- 359

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER- 347
                          D+  +L   T     + +  + KSDG+  Y   D+     +YE+ 
Sbjct: 360 ---------------DKGAVLIDLTKFNKKLGKTIVQKSDGTTLYLTRDVGAAMDRYEKY 404

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELV 389
            FD MIYV+ S    +  +   +   +    A                     V L  ++
Sbjct: 405 KFDKMIYVIASQQDLHTAQFFEILKQMGFDWADRLQHINFGMVQGMSTRKGTVVFLDNIL 464

Query: 390 RLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
              ++ M   M K    +        V D VG  +V    +  K     +F + ++    
Sbjct: 465 EETKEKMHDVMKKNEAKYAQIEKPEEVADLVGISAVMIQDMQSKRINNYEFKWERMLSF- 523

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + +   Y+QYA++R RS+ R A +I PD    L   +    E   + + + LI  LA+YP
Sbjct: 524 EGDTGPYLQYAHSRLRSVERNASEITPD---KLLDADFSLLE---EPAAILLIRLLAQYP 577

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+ N+    EP  +  YL+ L       +        + +V     +L   RL L  A 
Sbjct: 578 DVLRNSIKTHEPATVVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYAAA 630

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +G+ ++G+     M
Sbjct: 631 RQVLYNGMCLLGLTPVERM 649


>gi|15613397|ref|NP_241700.1| arginine-tRNA ligase [Bacillus halodurans C-125]
 gi|38372617|sp|Q9KEL8|SYR2_BACHD RecName: Full=Arginyl-tRNA synthetase 2; AltName:
           Full=Arginine--tRNA ligase 2; Short=ArgRS 2
 gi|10173449|dbj|BAB04553.1| arginine-tRNA ligase [Bacillus halodurans C-125]
          Length = 561

 Score =  351 bits (902), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 123/608 (20%), Positives = 229/608 (37%), Gaps = 83/608 (13%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI-V 69
           L   + E   +I   K+     ++E P     G L+      L++     P  IA  +  
Sbjct: 2   LAQMISEELARILSLKEDEVERLLEIPPQETLGDLAF-PCFTLAKTKRKAPPFIAAELEA 60

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           A ++          A  G++N +     +   L   + S  +Y +   G G +V I+  S
Sbjct: 61  AFLEHKEVTAK---ATGGYVNFFFHRETVAGQLFQEMKSN-QYWQPNSGDGKRVVIDMSS 116

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N   P  +GH R  ++G  L  L+  +GY+  R  ++ D G Q      +         
Sbjct: 117 PNIAKPFGIGHLRSTIIGHALYHLLKKTGYDPIRVNHLGDWGTQFGKQIAAYQ------R 170

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIR 246
           +  D DL +      +L+   +   +    E L     +W   +++   +A       ++
Sbjct: 171 WGGDVDLKQNPI-ASFLELYVRFHEEAEKDESLEDEGREWFKKLEEGDEEADRLWTYFVK 229

Query: 247 DDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + L   +  ++    E D+  G+      +  ++  L  +G +         S+      
Sbjct: 230 ESLNEFDRMYNRLGVEFDYVLGESFYNDQMAPVVKELQEKGLL-------TCSEGALVVP 282

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSG 362
           ++   L              ++KSDG+  Y   DLA    ++  +  + ++YV+G + + 
Sbjct: 283 LEDADL----------PPCLIVKSDGTSIYATRDLATAIYRHHVQKGEKLLYVVGGEQTL 332

Query: 363 YVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
           + K++  V   +  K A Q   +   L+RL  DG   KMS R G  + L  V+       
Sbjct: 333 HFKQVFHVLKKMGYKWADQCEHITFGLLRL--DGK--KMSTRRGRVVMLEDVLNDVVAHA 388

Query: 415 ------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                             + VG  +V F  L +     ++F          E    YVQY
Sbjct: 389 KAKIKEKHPNHPHLHEVAEAVGVGAVIFGDLKQDRRLDVNFRLEDALSFEGE-TGPYVQY 447

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            YAR +SI R+   +      D         +         L+  L +YP V+  AT A+
Sbjct: 448 TYARIQSILRKGDKLNDSRHMDW--------QHVTKDEGWSLLKVLIQYPNVLIKATEAR 499

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP++LA Y+  ++  F+  +           + A++  +   RL L      +I   + +
Sbjct: 500 EPHQLARYVLTVSKKFNQFYHKY-------VILADDETVRQARLILAERTGEVIADAMAV 552

Query: 577 IGVESPNE 584
           +GV++P E
Sbjct: 553 LGVKTPEE 560


>gi|297738741|emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  351 bits (901), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 127/633 (20%), Positives = 228/633 (36%), Gaps = 132/633 (20%)

Query: 40  CAHGHLSTNAAMIL-SRPLGLD------PLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
              G    N AM L SR           P TI ++I+  +     ++   +AG GF+N+ 
Sbjct: 98  PKFGDYQCNNAMGLWSRIKNKKDNGFKGPPTIGKVIMENLPPTEMIEKCTLAGPGFVNIK 157

Query: 93  LSPS---------------------------------------------YLRKILSSIVV 107
           LS S                                             ++ K +  +++
Sbjct: 158 LSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFVNIKLSTSWIAKNIQKMLI 217

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
            GIE     +    +  ++F S N    MHVGH R  ++GDTLA ++ FS  +V R  ++
Sbjct: 218 IGIETWAPRL-PIKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHV 276

Query: 168 NDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
            D G Q   L   +F ++   + A      DL E Y               +    ++  
Sbjct: 277 GDWGTQFGMLIEFLFDKFPNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRL 336

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
              +        +   + +I R++   +  +  + + E      +P  I  +I+ L+ QG
Sbjct: 337 QGGETSY---RRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYNPY-IPGVIEQLSNQG 392

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            V E       S+  +   ++           G ++   ++KSDG Y Y + D+A    +
Sbjct: 393 LVEE-------SQGARVIHIE-----------GVNIPLIVVKSDGGYNYASTDMAALWYR 434

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPI 398
             E   + +IYV       + + + + A       A  N+      +   + L  DG   
Sbjct: 435 LNEEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGK-- 492

Query: 399 KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWR 429
           +   R  + + L  ++DE                             VG  +V++  L  
Sbjct: 493 RFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKYADLKN 552

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                  F+F ++    K N   Y+ YA+AR  SI R++       D D   +  +    
Sbjct: 553 NRLTNYTFNFDQMLN-DKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGVLTLD 606

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             D  E  L +HL ++  V+E A     P  L  YLY+L+  F   +S+ +       V 
Sbjct: 607 HDD--ERGLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKFYSNCQ-------VV 657

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +  +    RL L  A A ++    +++G+   
Sbjct: 658 GSAEE--TSRLLLCEATAVVMRKCFHLLGITPV 688


>gi|268574474|ref|XP_002642214.1| C. briggsae CBR-RRT-1 protein [Caenorhabditis briggsae]
 gi|187025216|emb|CAP35683.1| CBR-RARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 710

 Score =  351 bits (901), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 130/620 (20%), Positives = 247/620 (39%), Gaps = 72/620 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG---- 58
           +F    S  K  +++    + V       +++    +   G    N+AM ++  L     
Sbjct: 126 IFGRLQSLFKKAIEDAFPGLDVP------LLLAETPNPQFGDYQCNSAMPIAAILKATGI 179

Query: 59  -LDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              P  + + I A++  +   V+ + +   GFIN++L+  YLRK +SS+ ++GI   +  
Sbjct: 180 NKKPGDVGKEIHAKLPENIDFVEKIAVMPAGFINVFLNADYLRKQISSLALNGISLPK-- 237

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                +V ++F S N    MHVGH R  ++GD++  L    GY+V R  +I D G Q   
Sbjct: 238 -VAKKRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGYDVLRVNHIGDWGTQFGM 296

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L   ++ R+   L      LP+             +L   Y      F E++        
Sbjct: 297 LIAHLYDRFPDFLKK----LPD-----------ISDLQAFYKESKKRFDEDEQFKKRAYE 341

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            V  +     + ++A N   D+    +   +      I+D+ ++   Q  + E +    +
Sbjct: 342 CVVKLQSRDGEIVQAWNTICDVSKKYNQIVYDHLDIKIKDVGESFY-QDKMVELVKWIKE 400

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
           +K       + +Q++F +   G DV   ++KSDG +TY  +DLA  K +  E   D  IY
Sbjct: 401 NKPDMLRKEEGRQIMFPT---GCDVPLTVVKSDGGFTYDTSDLAALKYRMLEEKCDWNIY 457

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ +  + +++ + A              +      L       K   R+G+ + L  ++
Sbjct: 458 VVDAGQNLHLETVYAAGRDFGWYDENTQRVEHVGFGLVLGDDKKKFKTRSGETVRLLDLL 517

Query: 415 -----------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                        D V    V++  L    ++   F F ++ + 
Sbjct: 518 SEGVKRATEKLKEKGRDAVMTEEELAAARDAVAFGCVKYADLSHTRTQDYIFSFDRMLD- 576

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAYAR RSI R +      L   L    ++P       +EL+L   L + 
Sbjct: 577 DRGNTAVYLLYAYARIRSIVRTSGVTDSQLADYLAKTPILP---LNHPAELKLAKQLLKL 633

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +     +   +++  Y+Y+LA++FH  ++      R    +     +   RL L   
Sbjct: 634 SDCVLLVLDSLMLHQMCDYVYNLATLFHDFYNECYVIERK---EGEPVVVHFHRLALCEV 690

Query: 566 VASIINSGLNIIGVESPNEM 585
            A++I++   I+G+    +M
Sbjct: 691 TANVISTCFKILGIREVPKM 710


>gi|29839939|ref|NP_829045.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301690|sp|Q824H4|SYR_CHLCV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|29834286|gb|AAP04923.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 564

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/618 (23%), Positives = 226/618 (36%), Gaps = 91/618 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L +  SS  +        +I           I +      GH   N AM L+R L + 
Sbjct: 3   MTLLSYLSSLCREATLSAFPQIDTFSPD-----ITQSTKEHFGHYQCNDAMKLARTLKMA 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  I       S+ IAG GFIN   S  +L   L +         R  +   
Sbjct: 58  PRAIAEAIVNHIPK-EIFTSIEIAGAGFINFTFSKEFLNNSLKTFSEELSSGFR--VKDP 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV I+F S N    MHVGH R  ++GD LA + AF G +V+R  +I D G     L   
Sbjct: 115 KKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWGTAFGMLIT- 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y Q   + D +  E              L   Y      F E+         +V A
Sbjct: 174 ----YLQEEPSEDIENLED-------------LTVLYKKAHARFAEDAEFKKRSQTNVVA 216

Query: 241 MMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKT 298
           +      D  AL +   I  ISE  F       I +I+D  + ++G  +     P   + 
Sbjct: 217 LQAG---DPSALKLWKQICAISERAFQ-----KIYNILDIAIEKRGESFYNPFLPEIIQD 268

Query: 299 TQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMI 353
            +  ++    D  + +F     G  +   + KSDG Y Y   DLA  + +    G D +I
Sbjct: 269 LENKNLITISDNAKCVF---HEGFSIPLMVQKSDGGYNYATTDLAAMRYRVNNDGADKII 325

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V     S + + LEA A A      +          L  D    K   R+G+ I L+ +
Sbjct: 326 IVTDMGQSLHFQLLEATALAAGYLPNKETFSHVGFG-LVLDSEGKKFKTRSGENIKLKEL 384

Query: 414 VD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +D                            +G +++++  L         F F K+  + 
Sbjct: 385 LDTAIDQAKATLKEHRPEISDEEISSRAPILGINAIKYADLSSHRVSDYIFSFEKML-RF 443

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   ++ YAY R + I R+      DL+            +  + SE  L + L  +P
Sbjct: 444 EGNTAMFLLYAYVRIQGIKRRLGIETLDLEA---------TPNIQEPSEEALALALLRFP 494

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I+       P+ L  YLY L + F+  +                      RL L   V
Sbjct: 495 EAIDLTLKDLCPHFLTDYLYMLTNKFNAFFRDCHI---------EGSSHQKERLYLCALV 545

Query: 567 ASIINSGLNIIGVESPNE 584
              + +G++++G+++ ++
Sbjct: 546 EKTLAAGMHLLGLQTLDK 563


>gi|224023557|ref|ZP_03641923.1| hypothetical protein BACCOPRO_00260 [Bacteroides coprophilus DSM
           18228]
 gi|224016779|gb|EEF74791.1| hypothetical protein BACCOPRO_00260 [Bacteroides coprophilus DSM
           18228]
          Length = 605

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 123/647 (19%), Positives = 242/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ + N +KE+    +V  K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLTASVINGVKEL-YGQEVPAKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K      + +   KGF+NL ++     ++L+ I        R      
Sbjct: 56  PEQTAQEIGEYLKQHEPAIASYNVIKGFLNLTIASDVWVELLNRIHADAEWGIRKADENA 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA++MA +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIMAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------- 227
            + +Y        S     +  G Y     K    +    +  F  E             
Sbjct: 176 -WLKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQAEGMNEEEAKAKAEA 234

Query: 228 ------KWLPIVKDY-----SVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 +   +++ +      V+++ K++         +  K + +  D    E   +  
Sbjct: 235 ESPLMLEAREMLRKWEANDPEVRSLWKMMNDWVYAGFDETYKMMGVSFDKIYYESQTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ +                 +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFFRK---------------EDGSVWADLTAEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++                              VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEAMIETAKETSNELGKLDGLTKEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +SI R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSILRKAAEAGITV--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                VIP   E  T E  LI  LA++  V++ A     P  LA Y YDL   ++  +  
Sbjct: 508 ---PAVIPAGIELSTKEEGLIQMLADFGNVVKQAGTDYNPSILANYAYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  L + RL L   V  ++   + ++G+E P  M
Sbjct: 565 ------FSILREENEALKVFRLALSQNVGKVVKLAMGLLGIEVPERM 605


>gi|261379756|ref|ZP_05984329.1| arginine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797434|gb|EFC52781.1| arginine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 637

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 122/670 (18%), Positives = 237/670 (35%), Gaps = 118/670 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+           +E              +V++  ++  HG    N  M  ++    +
Sbjct: 1   MNLYQTVE-------REAQAAFAAAGIADSPVVLQPTKNAEHGDFQINGVMGAAKKAKQN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +   +  +  ++S  +AG GFINL L P +L + + + +     +G     K 
Sbjct: 54  PRELAQKVAEVLADNAVIESAEVAGPGFINLRLRPEFLAQNIQTALND-ARFGVAKTDKP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R +++GD+++ ++ F G  V R+ ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSV 238
           +  + +       +DL + Y             AD     ++     +E  L + K +  
Sbjct: 173 LVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVD 232

Query: 239 QAM--MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG------I 290
            ++   + + D L  L ++ +    E  ++      ++ ++D+LA++G   E        
Sbjct: 233 ISLSHAQAVYDTL-GLKLRPEDVAGESTYNND----LQPVVDDLAQKGLAVEDDGAKVVF 287

Query: 291 LPPPKSKTTQ----KCDMDRKQLLFRSTMVGD--------DVDRPLLKSDGSYTYFAADL 338
           L   K+K  +             L+ ST +            DR L   D         L
Sbjct: 288 LDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLYVVDHRQALHFEQL 347

Query: 339 -------AYFKCKYERGFDNMIYVMGSDHSGY-----------------VKRLEAVAAAV 374
                   Y     +  F     +MG D   +                 + R E V    
Sbjct: 348 FTTSRKAGYLPEDVKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDLLDEAINRAEQVVKEK 407

Query: 375 SEKKAQINVLLCELVRL---------YRDGMPIKMSKRAGDFITLRHVV----------- 414
           + K  Q+   L + ++           ++ +   +  +  +      VV           
Sbjct: 408 NPKW-QLTTELEDGLKKISSLTNSDNLKNKLKYNLENKKLEITLENDVVYHLPIDKIDKI 466

Query: 415 -------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    FD+  +    + N   Y+Q
Sbjct: 467 VRGAEEYTDTALSDAEKIARVVGIGAVKYADLSKNRTSDYVFDWDAMLSF-EGNTAPYLQ 525

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YAY R +S+FR+A +            +        +  E QL   L ++  V+++    
Sbjct: 526 YAYTRVQSVFRKAGEW-----------DATAPTVLTEPLEKQLAAELLKFEDVLQSVADT 574

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P+ LA YLY +A++F   +           +  +       RLQL       +  GL 
Sbjct: 575 AYPHYLAAYLYQIATLFSRFYEAC-------PILKSEGATRNSRLQLAKLTGDTLKQGLE 627

Query: 576 IIGVESPNEM 585
           ++G++  + M
Sbjct: 628 LLGIDVLDVM 637


>gi|55379731|ref|YP_137581.1| arginyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74516150|sp|Q5UXX8|SYR_HALMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55232456|gb|AAV47875.1| arginyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 579

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 150/628 (23%), Positives = 255/628 (40%), Gaps = 94/628 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    + +++ L +    + +  + L    IE P +     L+++ A  L+  +G  P 
Sbjct: 1   MFLQLRAEVEDALADALTTLDLPAEDLG---IEEPPEDVDAVLASSVAFRLAGEVGTAPP 57

Query: 63  TIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  I   I  D    V  V   G  ++N   S +Y  + L S+  SG      L  + 
Sbjct: 58  NVASDIADAIAADDLTYVSDVTTQGP-YVNFLPSEAYFAETLQSVTESG---FGRLPDRD 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T V +E  SANPTGP+HVG  R  ++GD +A ++ ++GY+V R YY+NDAG QI     +
Sbjct: 114 TSVVVEHTSANPTGPVHVGRARNPIIGDAVARVLDYAGYDVDRHYYVNDAGRQIAVFTWA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLK---------HVGKELADKYSSELLNFPEEKWLP 231
                +  L   + + PE      Y K             E A+     +L   E+    
Sbjct: 174 YETFDEDDLPEPERESPEYEMVRYYRKGNTILEDGDPDEVEAAEAEVQSILQGLEDGDEE 233

Query: 232 IVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +  +  V  ++  +++ L  L  + D F+ E  F R       D++D L        G
Sbjct: 234 TYERVAEVVDTVLGGMQNTLGRLPAEFDEFVKETKFMRN--GDTDDLVDRLK-------G 284

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +      +   + D+              + +   L+SDG+  Y   DLA+ + K++  +
Sbjct: 285 LDCAVYEEDAWQLDLPD-----------FEKNLVFLRSDGTSLYTTRDLAHHEWKFDT-Y 332

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D  + V+G DH     +L A    +     Q+  +    V L   G    MS R G  I 
Sbjct: 333 DRAVTVLGEDHKLQADQLAAALELLDNDTDQLRQVFYSWVNLPEGG----MSTREGTGID 388

Query: 410 LRHVVDE--------------------------------VGSDSVRFMMLWRKNSELLDF 437
           L  ++DE                                VG  +VR+ ++ ++ ++ + F
Sbjct: 389 LDDLLDEAIDRAREEVESRLDDRTRGDLDEDDIDRIARQVGIGAVRYDIVSKQPTKGITF 448

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           ++ +  +   ++   YVQY +ARC  I           D +    +    +   +  E  
Sbjct: 449 EWDRALDFEAQS-APYVQYVHARCCGIL---------GDVETDIPDEPDLDPLSEPEERD 498

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  LA +P VIE A     P+ +A Y  DLA  F+  +   RE P    V   + +   
Sbjct: 499 LLRELARFPAVIEAAADDLTPHTVATYTRDLAETFNAFY---RECP----VLDADPETRA 551

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL LV    + I + L+ +GVE+P  M
Sbjct: 552 ARLALVDGTRTTIANALDALGVEAPTSM 579


>gi|304384147|ref|ZP_07366600.1| arginine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304334774|gb|EFM01051.1| arginine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 604

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 119/642 (18%), Positives = 238/642 (37%), Gaps = 103/642 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               + + +     ++  E      I +++ +    GHL T       +     P  + +
Sbjct: 3   IEQLISHAVAAAVQQLYGEAAANVPIQLQKTKREFEGHL-TLVTFPFVKTARKKPEEVGQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + F   KGF+NL ++PS    +L+ I        + +      V IE
Sbjct: 62  EIGECLKANCTAVASFNVVKGFLNLVVAPSAWLSLLNDINADEHFGEKAVTSNSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLSQIMQANGNKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYLKH--------------------VGKELADKYSSELLNFPE 226
                  S     +  G Y                       + +E A+K + E      
Sbjct: 181 HGETPETSGKKGDHLIGDYYVAFDKHYREEIKMLKAQLMNEGIDEETAEKRAKEEAPLMM 240

Query: 227 EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           E    +VK    D  V+ + K++         +  +AL +  D    E D +    + + 
Sbjct: 241 EAREMLVKWEQGDPEVRRLWKMMNDWVYAGFDETYRALGVSFDKIYYESDTYLEGKAKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +             +   K   +   D+  + L            + LL+SDG+  Y 
Sbjct: 301 EGLKR----------GIFERKGDGSVWADLSNEGL----------DQKLLLRSDGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +    
Sbjct: 341 TQDIGTADMRFRDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVVDE------------------------------VGSDSVR 423
           +G   KM  R G  +    +++                               VG  +++
Sbjct: 401 NG---KMKSREGTVVDADELIEAMIESAARMSDDKVNKLENVSEEERHEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A+         L   +
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAE--------GLNIPD 508

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + ++      E +LI  + E+  V+  +     P  +A Y Y+L   F+  +       
Sbjct: 509 QLSEDLPLGAKEAELIQKMDEFGAVVVQSGKDYSPSGIANYCYELTKEFNQFYHD----- 563

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   +    ++RL L   VA +I +G+ ++G+E P  M
Sbjct: 564 -YSILHEEDEGKKIVRLMLAKNVAKVIKNGMALLGIEVPERM 604


>gi|110669121|ref|YP_658932.1| arginyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689569|sp|Q18FC1|SYR_HALWD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|109626868|emb|CAJ53337.1| arginine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 596

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 141/637 (22%), Positives = 262/637 (41%), Gaps = 95/637 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F S +++ ++     + +     D + +E P +     L+++ A  L+R     P 
Sbjct: 1   MFRPFRSEVEHAVESALQTLALPT---DDLGVETPPEDVPATLASSVAFRLARSAKDSPP 57

Query: 63  TIAELIVARIKIDPD------VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            +A+ I A I ++PD      +D V   G  +IN +++ +Y    L++    G  +  N 
Sbjct: 58  RVADDIAAAIDLEPDSQTYEYIDHVDTRGP-YINFHVNDAYYMDTLTAAQDPGYGHLPNT 116

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
              G  V +E  SANPTGP+HVG  R  + GD +A L+ ++G  V R YY+NDAG Q+  
Sbjct: 117 ---GQSVVVEHTSANPTGPVHVGRGRNTIFGDAVARLLEYNGDTVDRHYYLNDAGRQVGV 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-- 234
              +       +L + + D P+      Y +  G E  +   ++ +   E++   I+   
Sbjct: 174 FTWAYEKFDADSLPDPERDRPDYDLVRYYRR--GNEFLENADADAVESAEDEIASIINGL 231

Query: 235 -----------DYSVQAMMKIIRDDLKALNIQHDIFISE-DDFHRGDPSPIRDIIDNLAR 282
                         V  ++  ++     L+   D FI E      GD   +   ++ L  
Sbjct: 232 EAGNTETYERVQTVVDQVIDGMQHSFDRLSAIFDEFIKETRFIQNGDADAV---VERL-- 286

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                         K+      +        +    + +   L+SDG+  Y   DLA+ +
Sbjct: 287 --------------KSADCAVYEDDAWQIDLSAYDIEKNLVFLRSDGTTLYTTRDLAHHE 332

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            K++  +D  + ++G DH    ++L+A    +     Q+       V L   G    MS 
Sbjct: 333 WKFD-NYDASVTILGEDHKLQAEQLDATLQILGNDTDQLRQPFYSWVNLPEGG----MST 387

Query: 403 RAGDFITLRHVVDE---------------------------------VGSDSVRFMMLWR 429
           R G  + L  ++DE                                 VG  +VR+ ++ +
Sbjct: 388 RKGTGVDLDDLLDEAIARAREEVHDRLGSRVRDDSLSSDDIDRIARQVGVGAVRYDIVSK 447

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           + ++ + F++ +  +   ++   Y+QY +ARC  I     +   DLD D    + IP  +
Sbjct: 448 QPTKGITFEWDRALDFEAQS-APYIQYVHARCCGI-ETEVNSNTDLDIDALTSDSIPDIT 505

Query: 490 EF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                +E  L+  +A +P V+E+A    EP+ +A +    A  F+  +           +
Sbjct: 506 MLRTDAERALLQEIARFPAVVESAAADLEPHVIATFARSFAEQFNTFYREC------SVL 559

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            A +  +T  R+ LV A    + + L+I+GVE+P  M
Sbjct: 560 NAESEIMTAARVSLVRAARHTVANALDIVGVEAPQSM 596


>gi|302757685|ref|XP_002962266.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii]
 gi|300170925|gb|EFJ37526.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii]
          Length = 578

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 122/615 (19%), Positives = 223/615 (36%), Gaps = 81/615 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLGL-----D 60
             S +    +        E   ++ I +    +   G    N AM + SR  G+     +
Sbjct: 7   VRSEISQIFQAAFRSTVGEWVSVEPI-VTACNNPKFGDYQINNAMGIWSRIKGMQSTYGN 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P++IA+ ++  I      +   +AG G+IN+ LS  ++ + L++++  G++     +   
Sbjct: 66  PVSIAQDVLRNIPRTSLFEKTSVAGAGYINVTLSARFIAERLTTVLHQGVDALAPEL-PV 124

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               ++F S N    +HVGH R  V+GD++A ++ F    V R  ++ D G Q   L   
Sbjct: 125 KHALVDFSSPNIAKELHVGHLRSTVIGDSVARMLEFCNVSVMRRNHVGDWGTQFGMLLEH 184

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-Q 239
           +F    +       DL + Y          ++   K    ++     +     K  S+  
Sbjct: 185 IFETGAEV--EGIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRSEAEYHAKWKSLCD 242

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +        LN+  +    E  +H   P  I+     L  +G + E           
Sbjct: 243 VSRRAYERTYGRLNVSLEEK-GESFYHPYIPYAIKA----LEEKGLLQES---------- 287

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
                D  +++F   + G D+   + K+DG+ TY   DLA    +      + +IYV   
Sbjct: 288 -----DGARVIF---LEGYDIPLIVTKTDGAITYATTDLAALWYRVHVEKAEWIIYVTDV 339

Query: 359 DHSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSK------------- 402
               +       A                +   + L  DG  I+  K             
Sbjct: 340 GQKQHFDMFFQAAKLAGWLPEHGFPKAQHIGFGMVLGEDGKRIRGRKGGVLLANLLDDAK 399

Query: 403 -----------RAGDF--ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                      R G++    L    + +G  +V++  L         FDF ++ +  K N
Sbjct: 400 SRSHKELIERGRKGEWSGQDLEAAAEALGYGAVKYADLKNNRETNYRFDFDQMLD-IKGN 458

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+ YAYAR  SI R++     ++         I +       E  L +HL ++   +
Sbjct: 459 TAVYLFYAYARVCSIIRKSGRSIDEI-------KQICELVVEHPHERSLGLHLIQFTETV 511

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E++     P  L  YLY L+ +F   ++  + N  L+            RL L  A   I
Sbjct: 512 EDSISRLLPSTLCDYLYTLSELFTQFYTSCKVNGSLQ---------EASRLLLCEAARLI 562

Query: 570 INSGLNIIGVESPNE 584
           +  GL ++G+     
Sbjct: 563 MKQGLELLGLTPLER 577


>gi|189461674|ref|ZP_03010459.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136]
 gi|189431646|gb|EDV00631.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136]
          Length = 597

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 124/633 (19%), Positives = 237/633 (37%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   +     ++   +     + +++ +    GHL T       +     P   A+
Sbjct: 3   IEDKLTASVTNGVKELYGAEVPAKMVQLQKTKKEFEGHL-TLVVFPFLKMSKKGPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + +   KGF+NL ++     ++L+ I        +        V IE
Sbjct: 62  EIGEYLKKNEPAIANYNVIKGFLNLTIASDVWVELLNRIHADAQWGIQKATEDAPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA++MA +G +V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA-WLKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
                  S     +  G Y     KH   E+A+     L     E   P+++        
Sbjct: 181 NGETPESSGKKGDHLIGDYYVAFDKHYKAEVAELMEKGLSKEEAEAQSPLMQEAREMLRK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  ++A+ K +         +  K + +  D    E + +      + + +     
Sbjct: 241 WEANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESETYLEGKEKVLEGL----E 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ Y                 +   +    T  G D  + LL++DG+  Y   D+   K
Sbjct: 297 KGFFYRK---------------EDGSVWADLTAEGLD-HKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            +++    + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFQDFPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    +++                              VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMEAMIETAKETSSELGKLDGLTKEEADDIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR +SI R+A +    +        VIP   E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIQSILRKAAEAGITI------PAVIPTGVELS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
           T E  LI  LA++  V+  A     P  LA Y YDL   ++  +           ++  N
Sbjct: 511 TKEEGLIQMLADFTNVVRQAGSDYNPSILANYAYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L + RL L   V  I+   + ++G+E P  M
Sbjct: 565 EALKVFRLALSQNVGKIVKLAMGLLGIEVPERM 597


>gi|300727425|ref|ZP_07060834.1| arginine--tRNA ligase [Prevotella bryantii B14]
 gi|299775305|gb|EFI71904.1| arginine--tRNA ligase [Prevotella bryantii B14]
          Length = 605

 Score =  350 bits (898), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 119/642 (18%), Positives = 251/642 (39%), Gaps = 102/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ N +     ++  ++   + + +++ R    G+L T       +     P   A+
Sbjct: 3   IENQISNAVLAAVKELYGQEVPENMVQLQKTRSNFEGNL-TLVVFPFLKISKKKPEDTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   ++ +    + F   KGF+NL ++P+   ++L+ I  +     + +      V IE
Sbjct: 62  ELGEYLQANCKAIAKFNVVKGFLNLSIAPAAWVELLNEINANPKFGEKPVTENSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WLKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE-----EKWLPIVK 234
             +    +     +  G +        +   KEL  +Y++E +   E     E+  P++K
Sbjct: 181 NNITPEKAGKKGDHLIGDFYVAFDKHYREEVKELVAQYTAEGMGEEEAKKKAEQEAPLIK 240

Query: 235 DYSVQAMMKI---------------------IRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           + +   ++K                        +  KAL +  D    E + +      +
Sbjct: 241 E-AHDMLVKWENNDPEIRQLWAKMNSWVYAGFDETYKALGVSFDKIYYESNTYLEGKKKV 299

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            + +     +G  Y                 D   +    T  G D ++ LL+SDG+  Y
Sbjct: 300 EEGL----EKGLFYR---------------RDDNSVWADLTKDGLD-EKLLLRSDGTSVY 339

Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +   
Sbjct: 340 MTQDIGTADMRFSDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVEL 399

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            +G   KM  R G  +    ++ E                             VG  +++
Sbjct: 400 PNG---KMKSREGTVVDADDLIAEMVKDARETSDELGKFKDMTEEEKNEIARIVGMGALK 456

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R AK+   ++   L    
Sbjct: 457 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRNAKEQNINIPASLSDN- 514

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                +  +  E++LI  + ++   +  A     P  +A Y Y+L   F+  +       
Sbjct: 515 -----APLNEKEIELIQKMNDFSAAVAEAGTNYSPSGIANYCYELTKDFNQFYHD----- 564

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++A+  +  + RL +   VA II +G+ ++G++ P  M
Sbjct: 565 -YSILKADTEEERVTRLVIAENVAKIIKNGMELLGIQVPERM 605


>gi|153854644|ref|ZP_01995894.1| hypothetical protein DORLON_01889 [Dorea longicatena DSM 13814]
 gi|149752748|gb|EDM62679.1| hypothetical protein DORLON_01889 [Dorea longicatena DSM 13814]
          Length = 544

 Score =  350 bits (898), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 120/582 (20%), Positives = 228/582 (39%), Gaps = 85/582 (14%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
           M  ++     P  IAE +VA +K    ++ V +   GFIN+ L  +++   L+ +     
Sbjct: 1   MAGAKAYKKAPFMIAEDVVALLKDSACMEEVEVVKPGFINIRLKKAFVADYLNQM-EEAE 59

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           + G         + +++   N   P+HVGH R A++G+++  +    G+EV  + ++ D 
Sbjct: 60  DLGIQKAENPEMIVVDYGGPNVAKPLHVGHLRSAIIGESVKRIARKMGHEVLGDIHLGDW 119

Query: 171 GAQINTLALSVFWRYQQALYNNDS---DLP----------EGYYP---GVYLKHVGKELA 214
           G Q+  +   +  R  +  Y ++S   + P          E  YP   G   +       
Sbjct: 120 GYQMGLIITELKERKPELPYFDESFEGEYPKEAPFTISELEEIYPTASGKAKEDDAYREN 179

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
             +++ LL      +  I  ++ +   +  ++ +   LN+  D++  E D        I 
Sbjct: 180 ALHATYLLQNGHRGYRAIW-NHIINVSVSDLKRNYANLNVSFDLWKGESDAQAY----IP 234

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSY 331
           D+ID L + G+ +E                D+  L+       D  + P   + KSDG+ 
Sbjct: 235 DMIDKLKKDGFAHE----------------DQGALVIDVQEETDTKEIPPCMIQKSDGAS 278

Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELV 389
            Y   DLA    + E    D +IYV+      +  ++   A       A+  +  L    
Sbjct: 279 LYGTTDLATLVQRVEDYHPDKVIYVVDKRQELHFTQVFRSAKKTGIVPAETELKFLGFGT 338

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------VGSDSVR 423
              +DG P K   R G  + L  ++ E                          +G  +++
Sbjct: 339 MNGKDGKPFK--TREGGVMRLETLISETAEKMYKKISENHAIEEEEARKTANMIGVAALK 396

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L  + S+   FD  +     + N   Y+ Y   R +SI  + +     LD       
Sbjct: 397 YGDLSNQASKDYVFDVDRFISF-EGNTGPYILYTIVRIKSILHKYQAQGNSLD------G 449

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           +  QE+  D  E  L++  A+Y  VI NA     P+K+  Y+YDLA+ F+  +       
Sbjct: 450 LKVQEAHAD-CEKALMLEAAKYNDVIANAFQDLAPHKICAYIYDLANAFNRFYH------ 502

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + +   N +     + L+     ++   ++++G E+P  M
Sbjct: 503 ETKILGEENAEKQKSYIALLKVTKDVLEGCIDVLGFEAPERM 544


>gi|325262862|ref|ZP_08129598.1| arginine--tRNA ligase [Clostridium sp. D5]
 gi|324031956|gb|EGB93235.1| arginine--tRNA ligase [Clostridium sp. D5]
          Length = 588

 Score =  350 bits (898), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 118/631 (18%), Positives = 234/631 (37%), Gaps = 98/631 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +   +++       ++      +  RP  C       N AM  ++     P  IAE
Sbjct: 4   LLELITIEMQKAFKGAGYDESFAKVTLSNRPDLCE---YQCNGAMAAAKTYKKAPFVIAE 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++ ++      +       GFINL +SP Y+   L+ +       G     K   + ++
Sbjct: 61  DVLEKLGECSCFEMAEAVKPGFINLKVSPVYVAGYLNQM-ADADSLGVEKAAKPDTIMVD 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +   N   P+HVGH R A++G+++     F G++V  + ++ D G Q+  +   +  R  
Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESIKRTARFKGHKVIGDIHLGDWGYQMGLIITELEKRKP 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ------- 239
              Y ++       Y G Y K     +++            K     +D ++Q       
Sbjct: 180 DLPYFDE------AYEGEYPKEAPFTISELEEIYPTASAFAKENEEYRDKALQATFLLQN 233

Query: 240 ------AMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                 A+ + I        + + + LN++ D++  E D  +     I D++  L   GY
Sbjct: 234 GRRGYRAIWEHIMNVSVADLKKNYENLNVEFDLWKGEADAQKY----IPDMVQRLKEDGY 289

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFK 342
            +                 D+  L+       D  + P   +LKSDG+  Y   DLA   
Sbjct: 290 AHY----------------DQGALVVDVQEEEDKKEVPPCMILKSDGAALYDTTDLATLV 333

Query: 343 CKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKM 400
            +      D +IYV+      +  ++   A      + ++++  L       +DG P K 
Sbjct: 334 EREALYQPDKLIYVVDKRQELHFVQVFRCAKKTGIVRPEVDMKFLGFGTMNGKDGKPFK- 392

Query: 401 SKRAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSEL 434
             R G  + L +++ E                          VG  ++++  L  + S+ 
Sbjct: 393 -TREGGVMRLENLIREIDEKMYDKIMDNRTVTEAEAQNTARLVGLAAIKYGDLSNQASKD 451

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             FD  +     + N   Y+ Y   R +SI  +  D    L+        +  +      
Sbjct: 452 YVFDVDRFTSF-EGNTGPYILYTIVRIKSILNKYLDGKGTLE-------SLAVKEALTEF 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++   ++  VI+ A     P+K+  Y+YDLA+ F+  +         + +   + +
Sbjct: 504 EKALMLEAVKFNDVIDAAFEESAPHKICAYIYDLANAFNKFYH------ETKILTEEDEE 557

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + L+  V  I+ + ++++G E+P  M
Sbjct: 558 RKAGYIALLKLVKEILETCIDLLGFEAPERM 588


>gi|33519907|ref|NP_878739.1| arginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|39932110|sp|Q7VQX7|SYR_BLOFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|33504252|emb|CAD83515.1| arginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 583

 Score =  350 bits (898), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 123/619 (19%), Positives = 237/619 (38%), Gaps = 70/619 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      R+   L  I+ K       L+ I +++      G    N  + +S+ L + 
Sbjct: 1   MNIQYLLLQRVHEALTLINTK-----SFLNLIQVQQSNHIRFGDYQINGMINISKHLQIP 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
               + + +  I +      +     GFIN++LSP+++   ++ I+   +      +   
Sbjct: 56  IKDFSNIFIKTINLKGIAKIIKFEPPGFINIFLSPTWIENKINHII--DLPKLGIDLIPS 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD++A +++F G+ V R  +I D G Q   L   
Sbjct: 114 KNIVIDYSSPNIAKEMHVGHLRSTIIGDSIARILSFLGHNVIRSNHIGDWGTQFGMLIAY 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +       L  NDS         + +     + + K      NF E     +VK      
Sbjct: 174 IKKHKINYLSLNDS-------QQISMLEYYYQESKKEYDSDPNFAELSRKYVVKLQKGDV 226

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + I   L  ++I ++  I    + R + +  +  I   +    +   I+   K+K   
Sbjct: 227 YCRKIWKYLVDISISNNQKI----YDRLNVTLKKKDIMGESMYHDMLPYIITDLKNKKLA 282

Query: 301 KCDMDRKQLLFRSTMVGDDVDRP----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
               D   ++F +       + P    + K DG Y Y   D+A  K + E    D +IY 
Sbjct: 283 -VTSDHATIVFLNQNKNSKKNNPFGVIIQKKDGGYLYSTTDIACIKYRCETLHADRIIYY 341

Query: 356 MGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           + S    ++ +   +A       K       +C ++ L ++  P K   R+G+ I L  +
Sbjct: 342 IDSRQKQHLMQAWEIAYQAGYITKAVVFEHHVCGML-LDKNKKPFK--TRSGNTIKLITL 398

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++E                           +   ++++  L +  +    F++ K+    
Sbjct: 399 LNEAFNKAYNLILNKNLNLEYKKINHLAHIISIGAIKYSELSKNRTTNYIFNWDKILNFD 458

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QYAY R  SIF++       ++     +    Q       E+ L + L ++ 
Sbjct: 459 -GNTAPYIQYAYTRISSIFKK-------INHRSELQEKKYQIFLSSQEEILLAICLLQFH 510

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +        P+ L  YLY L+++F   + H         ++         RL+L    
Sbjct: 511 ETLITVADRGTPHILCGYLYKLSTLFSLFYEHC------PILKTECTYTKYSRLKLSFIT 564

Query: 567 ASIINSGLNIIGVESPNEM 585
           A I+  GLN++G+E+   M
Sbjct: 565 AQILKKGLNLLGIETSEYM 583


>gi|325115167|emb|CBZ50723.1| arginyl-tRNAsynthetase, related [Neospora caninum Liverpool]
          Length = 594

 Score =  350 bits (898), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 118/637 (18%), Positives = 225/637 (35%), Gaps = 106/637 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD------ 60
            + ++K   +               I I        G    N+AM L +    D      
Sbjct: 4   LNVQVKEAFRRALLAAFPSVDHAPIIAI-----SKFGDFQCNSAMALFKQKSKDELGVQS 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P    E I   +K +P   +V  + +GF+ + ++  +L + L  ++            K 
Sbjct: 59  PKEAGEKIAEHLKGEPLFSNVQASPQGFVTVDVAGDWLSQDLKQVLRQKGPLQLPHADKK 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V ++F S N    MHVGH R  ++G+++  ++AF G+EV R  +I D G Q   L   
Sbjct: 119 LRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEY 178

Query: 181 VFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDY 236
           +  ++   +A   + SDL   Y               +    ++     +E  L   +  
Sbjct: 179 LHSQFPDYKANMPDISDLNAFYKKAKASFDADDGFKARSREMVVKLQGGDEAALESWR-- 236

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
               +  + R + + +  + D+ + E      +P  I  ++  L  +G +          
Sbjct: 237 ---LICDVSRHEFEKVYKRLDVTLEERGESYYNP-AIPKVVQELTDKGMI---------- 282

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D  + +F  T V  +V    +KSDG + Y + DLA  + +  ER  D +IYV
Sbjct: 283 -----TVSDGAKCVF--TRVS-EVPLMAVKSDGGFGYDSTDLAAIRDRLVERQGDWLIYV 334

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                  +  ++ A A            +      + +     +   R+G+ + L  ++D
Sbjct: 335 TDLGQEEHFAKIFAAAEQAGWHTPPETRVDHMGFGVVQGQDGKRFKTRSGEVVKLVDLLD 394

Query: 416 E------------------------------------------------VGSDSVRFMML 427
           E                                                +G  +V++  L
Sbjct: 395 EAKMRALKELQRRKEEEKEEEEKRESGDGCSCGTGTAVADEEMDKAAEAIGYSAVKYFDL 454

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +       F + ++ +  K N   Y+ YAYAR  +IFR+A      LD +         
Sbjct: 455 KQNRHTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKAGVDISTLDPEELKIE---- 509

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               + +E +L V LA++P V+         ++LA Y+Y ++  F   +   +     + 
Sbjct: 510 ----EPAERKLAVTLAQFPDVLATIVEDLHIHRLAEYMYKVSGAFTDFYQACKVLGGRQ- 564

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                      RL L  A   I+ +   ++G+     
Sbjct: 565 --------QNTRLLLCEATRKILQASFYLLGITPLER 593


>gi|313224957|emb|CBY20749.1| unnamed protein product [Oikopleura dioica]
          Length = 653

 Score =  350 bits (898), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 114/590 (19%), Positives = 232/590 (39%), Gaps = 74/590 (12%)

Query: 37  PRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           P+    G    N++M ++  L      + P  +A+ I+  I  +  +    IAG GFIN+
Sbjct: 97  PKQEKFGDYQCNSSMQIAGMLKDAGEKIAPRDVAKKILDNIPSNNLIKETTIAGPGFINV 156

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   Y+   +  +   G++Y ++   +G KV +++ S N    MHVGH R  ++GD++A
Sbjct: 157 FMCQKYMVNRIGELNNLGVQYDKSKS-RGRKVVVDYSSPNIAKEMHVGHLRSTIIGDSIA 215

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHV 209
           +L    GYEV R  ++ D G Q   L   +   +     N    SDL + +Y     +  
Sbjct: 216 NLFEAYGYEVLRINHVGDWGTQFGMLIAHLIDLFPDYDKNVPRISDLQK-FYKESKKRFD 274

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF----ISEDDF 265
            +E   K + E +   +     I K  + QA+ ++ R + + +  +  I     + E  +
Sbjct: 275 DEEDFKKRAYENVVKLQSHDPAIHK--AWQAICEVSRIEFQKVYDRLQITGLKEVGESFY 332

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                  +  ++D L ++  +              + D  R  +       G ++   ++
Sbjct: 333 Q----DKMNAVVDQLKKRDLL--------------EFDDGRYIMW----APGIEIPLTVV 370

Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K+ G YTY  +DL     +  E   D +IYV+      + +++ A A+      A    +
Sbjct: 371 KTGGGYTYDTSDLTALNYRVNEIKGDILIYVVDCGQELHFRQVFAAASKAGFYDAAQTRV 430

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
                 +       K   R+G+ + L  ++DE                            
Sbjct: 431 EHAGFGVVLGEDKKKFKTRSGETVRLVDLLDEGIKRANDQLLERGREKELTAQEMKDAAD 490

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            V    +++  L         F F ++ +  + N   Y+ Y   R RS+ R+ +    D 
Sbjct: 491 AVAYGCIKYADLKSNRKNDYVFSFDQMLD-IRGNTAAYLLYQLTRIRSVNRKVEGKITDE 549

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +      +   Q    D  E +L   +  +  ++  A      + +  ++YDL++ F   
Sbjct: 550 EISKIATS--GQFDLADPREFKLAKTILRFHEILSQAQRDLLIHPICEWMYDLSNAFSQF 607

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +    +    ++ + RL L  A AS++ +   I+G+ + ++M
Sbjct: 608 YDKCYIIEK----KDGKEEIKVGRLILASATASVMEAAFKILGIRTLHKM 653


>gi|254171817|ref|ZP_04878493.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033713|gb|EEB74539.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 640

 Score =  349 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 157/665 (23%), Positives = 266/665 (40%), Gaps = 108/665 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVE--KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ +   R +  LK+   ++  E  K+    I  +       G   T  A  L+R     
Sbjct: 2   VYKEIQERARLSLKKALDEMLTEAGKEWDGEITFDDTPSLELGDFGTAIAFQLARVFRKA 61

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IAE +V RI+    +  V  A  G+IN Y+  SY  R+++  I+  G  YG + IG+
Sbjct: 62  PKLIAEELVERIEKPEGIVEVK-AVNGYINFYVDYSYFGRELVGEILGKGEAYGESEIGR 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV +E  S NPT P+H+GH R AV+GDT+A +M   GY+V  + YI+D G Q   +  
Sbjct: 121 DKKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKVEVQNYIDDLGVQFAQVLW 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA-------------DKYSSELLNFPE 226
             +   ++     +++L E      ++ HV   L              DK   EL+   E
Sbjct: 181 G-YLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKRIEENPEVDKEVRELMKKLE 239

Query: 227 EKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
           E    I +      + ++K        + I +D+   E D  R        I +   +  
Sbjct: 240 EGNNEIAEIGRKLAERVVKAQMLTTYRMGIAYDLLSWESDIMRSG------IFEEAYQLI 293

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
              E      + K      MD ++L              L +SDG+ TY   D+AY   K
Sbjct: 294 ESNENFFWGKEGKYKGAFVMDLRKLFPEMKNPF----LVLKRSDGTATYTGKDIAYHLWK 349

Query: 345 YER---------------------------------GFDNMIYVMGSDHSGYVKRLEAVA 371
           + +                                   D +I V+G++       ++   
Sbjct: 350 FGKVKADMLYKLWDKTESHETWTTAPDGEKMPGRFGRGDIVINVIGAEQRHPQMAIKYAL 409

Query: 372 AAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFI--------------------- 408
             +  ++     + L  E V         K S R G ++                     
Sbjct: 410 QLLGFEESAENFHHLAYEHVVRPEG----KFSGRKGTWVGFTVDEVLNEAVQRARELVEG 465

Query: 409 --------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                       + + VG  +VRF ++     +++ F +  V     E+   Y+QYA+AR
Sbjct: 466 KNPNLSEEEKDRIAEAVGVGAVRFNLVKYSPDKVITFRWEDVLNFEGES-APYIQYAHAR 524

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           C SI R+A +   + D+           S+    E +LI  LA++P VIE+A    +P+ 
Sbjct: 525 CASILRKAGESGVETDWKALLEKA--DFSKLTLREKELIKLLAKFPEVIESAGRDIKPHL 582

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL +LAS+F+  +    ++P L+        +   RL LV AV  ++ +GL ++G+E
Sbjct: 583 VPAYLNELASLFNKFY---MDHPVLK----AEEGVKEERLLLVLAVKQVLRNGLELLGIE 635

Query: 581 SPNEM 585
           +P +M
Sbjct: 636 APEKM 640


>gi|313204952|ref|YP_004043609.1| arginyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444268|gb|ADQ80624.1| arginyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 597

 Score =  349 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 117/620 (18%), Positives = 244/620 (39%), Gaps = 58/620 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     + + N +K +     +E +  ++I +++ +    G L T       +     
Sbjct: 1   MNLETILGTVVANAVKTL---YGLETE-PNQIQLQKTKKEFEGDL-TVVIFPFVKAARKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P    + I   +  +  V S +   KGF+NL +S SY  + L+ I  +     +      
Sbjct: 56  PEQTGQEIGEYLLQNNPVVSKYNVIKGFLNLSISKSYWLETLNLIHSTPAFGTKTATDDA 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + IE+ S N   P+H+GH R  ++G ++A +   +G++V +   +ND G  I    L+
Sbjct: 116 ELMMIEYSSPNTNKPLHLGHIRNNLLGHSIAEIQKANGWKVIKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            +  +      + S L   +  G Y     KH   E+ +     +     +K  P++   
Sbjct: 176 -WKLFGNGETPDSSGLKGDHLVGKYYVIFDKHYKAEIKELIEKGMSEEEAKKSAPLI-LE 233

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + + ++    +D +   +   +            + +    D +  +   Y       + 
Sbjct: 234 AQKMLLAWENNDPEVRQLWETMNGWVYAGFDKTYTQMGVSFDKIYYESETYLEGKDKVEE 293

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                    R+     + + GD +D + LL++DG+  Y   D+   K +Y +   + M+Y
Sbjct: 294 GLANGVFYRREDGSVWADLTGDGLDEKLLLRADGTSVYMTQDIGTAKLRYDDYPINKMVY 353

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G++ + + + L  +   +  +  +  V     +    +G   KM  R G  +    ++
Sbjct: 354 VVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLM 410

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            E                             VG  S+++ +L     + + F+  K    
Sbjct: 411 SEMIETARETSQELGKLDNCTPEEIETIVRMVGLGSLKYFILKVDPRKNMTFNP-KESID 469

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   ++QY +AR +S+ R+A +   +        ++   + E    E  L+  L E+
Sbjct: 470 FNGNTGPFIQYTHARIKSVLRKASEQGLEF------GSINNTQLEISEKESYLVQSLTEF 523

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V++ A     P  +A Y+YDL   ++  +           ++  N  L   RL L  +
Sbjct: 524 PAVVKQAGDEFSPALIANYIYDLVKEYNQFYHD------FTILKEENAALKQFRLILSES 577

Query: 566 VASIINSGLNIIGVESPNEM 585
           +AS+I +G+ ++G++ P  M
Sbjct: 578 IASVIKTGMGLLGIDVPERM 597


>gi|332662973|ref|YP_004445761.1| Arginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331787|gb|AEE48888.1| Arginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 614

 Score =  349 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 121/642 (18%), Positives = 230/642 (35%), Gaps = 85/642 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S ++  + +    +   +   + I +   R    G   T      ++ +   
Sbjct: 1   MNIV----SIIQQGVVQGAAHLYQLEISAEDIPLSTTRKEFEGDY-TLVVFPFTKHVKKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ + A +         F   KGF+NL +  +Y +  L  I  +           G
Sbjct: 56  PEAIAQELGAYLVEQVQSIKAFNVIKGFLNLVVDDAYWQAFLQDIYHNPQFG--TQAPNG 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+ S N   P+H+GH R  ++G +++ +   +GY+V R   IND G  I    L+
Sbjct: 114 RKVMVEYCSPNTNKPLHLGHIRNILLGWSVSKIYEAAGYDVVRVQIINDRGIAICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------------LNFPE 226
            + +Y +      S +   ++ G Y     K+  ++Y +                     
Sbjct: 174 -WQKYGEGATPESSGIKSDHFVGDYYVLFEKKFQEEYKAWQQSPEAVALFEEKKKAEQSA 232

Query: 227 EKWLPIVKD-----------YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           E++    KD            + + ++    +D   + +   +              +  
Sbjct: 233 EEYFKTFKDQYFNLYSTLGKEARELLLAWEANDPATIELWKKMNGWVYAGFDSTFDKLGV 292

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCD--MDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
             D L  +   Y                  ++   +         D    L K DG+  Y
Sbjct: 293 RFDKLYYESNTYLLGRETVDQGLNSGVFYRLEDGSVWIDLEDAKLDKKLVLRK-DGTSVY 351

Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+   + +Y + G + MIYV+  + + + + L  +   + E  A     L   +   
Sbjct: 352 ITQDIGTAQVRYRDFGAEKMIYVVADEQNYHFQVLFEIMKRLGEPYAGGLYHLSYGMVDL 411

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEV-----------------------------GSDSVR 423
             G   KM  R G  +    ++DEV                             G  +++
Sbjct: 412 PSG---KMKSREGTVVDADDLIDEVVNEAWENSKERGTLADLSPEAQQEVIRKIGVAALK 468

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F ++     + + FD  +  +  +     YVQ A  RC S+  +A +            +
Sbjct: 469 FFIVKVHPKKRMIFDPKESVDL-QGQTGPYVQNAIVRCNSMLNKAGNP---------DLS 518

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                   +T+E  +I  L ++P +I+ A    +P  +A Y Y+LA  FH  W       
Sbjct: 519 AASDYHTLETAEKDIIAQLYQFPEIIKQAAEGYDPSMVAMYSYELAKAFHRFWHD----- 573

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R +QA        R+QL  AV +++  GL+++G+E+P  M
Sbjct: 574 -YRILQAETEAAKAFRIQLSMAVRNVLRMGLDLLGIETPERM 614


>gi|169828341|ref|YP_001698499.1| arginyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
 gi|168992829|gb|ACA40369.1| Arginyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 557

 Score =  349 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 115/616 (18%), Positives = 242/616 (39%), Gaps = 90/616 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +  +   L        VE+      ++E+P+    G ++      L++     
Sbjct: 1   MN--QQIAKSIAEILNHQLTAQDVEQ------LLEKPKSLERGDMAF-PCFTLAKIWKKP 51

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  I ++++ +  +  V   G G++N++L    + + +  +++   +       + 
Sbjct: 52  PQQIAIDIASQLQ-NEIIHQVQSVG-GYVNIFLHQVKVTQQVLGLIMQEQQNYGTNQAER 109

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V ++F S N   P  +GH R  V+G+ LA++   +GY+  R  ++ D G Q   L ++
Sbjct: 110 GSVVLDFSSPNIAKPFSMGHLRSTVIGNALANIAVKNGYQAIRINHLGDWGTQFGKLIVA 169

Query: 181 VF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDY 236
              W  ++A+  +  +     Y   +       + ++ +    + L   + + L + + +
Sbjct: 170 YQNWGDKEAITASPIEELLKIYVKFHTMAEQDPILNEMARAAFKALEDGDSEALALWQWF 229

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +   +   + L I+ D F  E  ++      +  ++  L  +G + E       S
Sbjct: 230 R-DVSLDEFQTIYQLLGIKFDEFTGEAFYN----DKMTKVVTELQNKGLLME-------S 277

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
           +     +M+             ++   L+ K+DG+  Y   DLA    +  +   + + Y
Sbjct: 278 EGAFVVEME-------------EMPPCLITKTDGATLYATRDLAAAFYRQQQYQPNKIFY 324

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G++ + + K+L  V   +    A+ ++       + +DG   KMS R G  + L  V+
Sbjct: 325 VVGNEQTLHFKQLFQVIEKMGYGWAK-DLQHVPFGMMLKDGK--KMSTRKGKVVLLADVL 381

Query: 415 DE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            E                         VG  +V F  L       ++F   ++     E 
Sbjct: 382 AEAIATAKRNIEDKNPHLQQKERVAQQVGVGAVIFNDLKYHRLNDIEFSIEQMMNFEGE- 440

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQY+YAR  SI  +               + +   +        +I+ L ++P+V+
Sbjct: 441 TGPYVQYSYARICSILAKGNV-----------PSQLKSYAPLGQQAWSIILLLEQFPQVV 489

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + +    +P  +A Y   LA +F+ +++H +           +      RL L H VA +
Sbjct: 490 DASFNQADPSLIAKYALQLARLFNKYYAHQKIL--------ADDAQQASRLALCHCVAIV 541

Query: 570 INSGLNIIGVESPNEM 585
           +   L ++G+ESP  M
Sbjct: 542 LKESLALLGIESPENM 557


>gi|331091306|ref|ZP_08340146.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330404467|gb|EGG84011.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 588

 Score =  349 bits (897), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 118/626 (18%), Positives = 233/626 (37%), Gaps = 82/626 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
               +  +   L++   +   E K     +  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIADIISGELEKAFEESGYEAKYGKVTLSNRPDLCE---YQCNGAMAAAKTYKKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V +++    +  V     GFIN+ LS  ++   L+ +       G     +   +
Sbjct: 58  IAGDVVEKLQNSEAISKVEAVNPGFINIKLSEEFVADYLNKMSEDD-HLGLEQNEEPKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++  AN   P+HVGH R A++G+++  +  F G EV  + ++ D G Q+  +   +  
Sbjct: 117 VIDYGGANVAKPLHVGHLRTAIIGESVKRIARFMGDEVIGDVHLGDWGYQMGLIITELKK 176

Query: 184 RYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------- 232
           R  +  Y ++    + PE     +         A  Y+ E  ++ EE             
Sbjct: 177 RKPELPYFDENFAGEYPEEAPFTIDELEEIYPTASAYAKEHDDYKEEALHATYLLQNGHK 236

Query: 233 ----VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
               +  + ++  +  ++ +   LN+  D++  E D        I D+++ L ++GY   
Sbjct: 237 GYTAIWKHIMRVSVTDLKKNYANLNVDFDLWKGESDAQPY----IPDMVEYLKKEGYARY 292

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY 345
                           D   L+       D  + P   +LKSDG+  Y   DLA    + 
Sbjct: 293 ----------------DDGALVIDVKEETDTKEIPPCMILKSDGASLYGTTDLATLIERE 336

Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIK---- 399
           +    D +IYV+      +  ++   A      K    +       +  +DG P K    
Sbjct: 337 KLYNPDEVIYVVDKRQELHFVQVFRSARKAHIVKDDTKLTFIGFGTMNGKDGKPFKTREG 396

Query: 400 --------------------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
                               M  RA +    R     VG  ++++  L  + S+   FD 
Sbjct: 397 GVMRLENLIGDIEERMYGKIMENRAIEEEEARKTAKIVGLSAIKYGDLSNQASKDYVFDV 456

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SI  +  ++          + V         SE  L+
Sbjct: 457 DRFTSF-EGNTGPYILYTIVRIKSILAKYTEMKTTPARASVKKAV-------SDSEKALM 508

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + + ++  VIE A   + P+K+  Y+Y+LA+ F+  +         + +   N +     
Sbjct: 509 LEITKFNSVIETAYEEKAPHKICAYVYELANAFNRFYH------ETKILAEENEERQKSF 562

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + ++     +  + ++++G E+P  M
Sbjct: 563 ISMLLLTKEVFEACVDMLGFEAPERM 588


>gi|294659494|ref|XP_461877.2| DEHA2G07590p [Debaryomyces hansenii CBS767]
 gi|199434005|emb|CAG90340.2| DEHA2G07590p [Debaryomyces hansenii]
          Length = 628

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 134/618 (21%), Positives = 242/618 (39%), Gaps = 79/618 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           ++ +  L+NY+     +I   ++ L    ++ P     G L      +  R  G++P   
Sbjct: 53  SNVTDVLRNYITNELHRISNVERELIFQSLDSPSTLDKGDLIIPIPRL--RLKGINPKEK 110

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKV 123
           A    A       +  V   G  F+  + S   L   ++   +V   +YG   IG   KV
Sbjct: 111 AAEWCASFDKGKYLSDVKAEGP-FLQFFFSKELLFNLVIKDTLVRTDKYGSLPIGLNKKV 169

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EF S N   P H GH R  ++G  L++L   +G++VTR  Y+ D G Q   LA+    
Sbjct: 170 IVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKAGWDVTRINYLGDWGKQFGLLAVGFEK 229

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK-------------HVGKELADKYSSELLNFPEEKWL 230
              +     D   P  +   VY+K                 + A  Y   + N  EE  L
Sbjct: 230 YGSEESLAKD---PINHLFEVYVKVNKDVTEEGEDATDGTNDKARAYFKRMENGDEEA-L 285

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            I K +   ++ K I D    LNI++D++  E    +     ++  +D   ++G ++E  
Sbjct: 286 KIWKRFRELSIHKYI-DTYARLNIKYDLYSGESQVSK---ESMKAAMDTFDKKGLLHE-- 339

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-G 348
                         DR   L   T     + + L+ KSDG+  Y   D+     +Y    
Sbjct: 340 --------------DRGAKLIDLTKFNKKLGKCLVEKSDGTSLYLTRDVGEAVKRYNTYK 385

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVR 390
           FD MIYV+ S    +V +   +   +  + A+                    V L  ++ 
Sbjct: 386 FDKMIYVIASQQDLHVAQFFEILKQMGFEWAKSLENVNFGMVQGMSTRKGTVVFLDNILE 445

Query: 391 LYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
             ++ M   M K    +  + +   + D VG  +V    +  K     +F + ++    +
Sbjct: 446 ETKEKMHEVMKKNEAKYAQIENPDLIADLVGISAVMIQDMQSKRINNYEFKWDRMTSF-E 504

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+QYA++R RSI R++       D           +   +     LI  LA+YP 
Sbjct: 505 GDTGPYLQYAHSRLRSIQRKS-------DISEEELLHANYDLLTEPCAANLIRTLAQYPD 557

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I+ A    EP  +  YL++L  +    +        + +V    ++L + RL L  +  
Sbjct: 558 TIQKALKTHEPSTIVTYLFNLTHIASQCYD-------ILWVAGQEKELAVARLALYASAR 610

Query: 568 SIINSGLNIIGVESPNEM 585
            ++++G+ ++G+   + M
Sbjct: 611 QVLHNGMTLLGLTPVDRM 628


>gi|269303449|gb|ACZ33549.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 561

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 126/579 (21%), Positives = 225/579 (38%), Gaps = 76/579 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I        GH   N AM L+R L   P  IAE IVA +  +P    + IAG GFIN   
Sbjct: 30  ITPSTKEHFGHYQCNDAMKLARVLKKAPRAIAEAIVAELPQEP-FSLIEIAGAGFINFTF 88

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP +L + L       ++ G   + +  K+ I+F S N    MHVGH R  ++GD+LA +
Sbjct: 89  SPVFLNQQL-EHFRDALKLGFQ-VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARI 146

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
            ++ G++V R  +I D G     L   +    +     +D +     Y   Y+     E 
Sbjct: 147 FSYVGHDVLRLNHIGDWGTAFGMLISYLQ---ENPCDYSDLEDLTSLYKKAYVCFTNDEE 203

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K S + +   + K    +  +  + + +      + +    DI + +      +P  +
Sbjct: 204 FKKRSQQNVVALQAKDPQAIAIW--EKICETSEKAFQKIYDILDIVVEKRGESFYNP-FL 260

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +II++L ++G +                  +  + +F        +   + KSDG Y Y
Sbjct: 261 PEIIEDLEKKGLL---------------TVSNDAKCVF---HEAFSIPFMVQKSDGGYNY 302

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              DLA  + + E    D +I V     S + + LEA A A    +  I   +   + L 
Sbjct: 303 ATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAGYLQPGIFSHVGFGLVLD 362

Query: 393 RDGMPIKMSKRAGDFITLRHVVD---------------------------EVGSDSVRFM 425
             G   K+  R+G+ + LR ++D                            +G +++++ 
Sbjct: 363 PQGK--KLKTRSGENVKLRELLDTAIEKAEEALREHRPELTDEEIQERAPVIGINAIKYS 420

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L    +    F F K+  + + N   ++ YAY R + I R+       L  +  P    
Sbjct: 421 DLSSHRTSDYVFSFEKML-RFEGNTAMFLLYAYVRIQGIKRRLG--ISQLSLEGPPEIQE 477

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           P E     + L        +P  +E+      P+ L  YLY+L   F+G +         
Sbjct: 478 PAEELLALTLL-------RFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDCHI---- 526

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                 +      RL L      ++ +G++++G+++   
Sbjct: 527 -----QDSPYAKSRLFLCALTEQVLATGMHLLGLKTLER 560


>gi|297838167|ref|XP_002886965.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332806|gb|EFH63224.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 623

 Score =  349 bits (896), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 122/622 (19%), Positives = 235/622 (37%), Gaps = 93/622 (14%)

Query: 8   SSRLKNY-----LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG---- 58
            S++KN      L E+  K+ V  +     +IE  +    G    N AM L   +     
Sbjct: 45  KSQIKNLRELAKLFEVSLKLTVPDEPNVEPLIEPAK---FGDYQCNNAMGLWSIIKGKGT 101

Query: 59  --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
               P  + + ++  +     V+S  IAG GF+N+ LS  ++ K + ++++ GI+     
Sbjct: 102 QFKGPPAVGQALIKNLPSSEMVESCSIAGPGFVNVVLSAKWIAKSIENMLIDGIDTWAPT 161

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +    +  ++F S N    MHVGH R  ++GDTLA ++ +S  EV R  ++ D G Q   
Sbjct: 162 L-SVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGM 220

Query: 177 LALSVFWRYQQ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           L   +F ++            DL   Y        +  E  +K    ++    +   P+ 
Sbjct: 221 LIEFLFEKFPDTDSVTETAIGDLQMFYKKSKLRFDLDPEFKEKAQQAVVRL--QGGDPVY 278

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +  +   + +I R++   +  +  + + E      +P  I ++I+ L+ +G V E     
Sbjct: 279 RK-AWAKICEISRNEFAKVYQRLRVELEEKGESFYNPY-IANVIEELSSKGLVEEN---- 332

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
                      +  +++F   + G ++   ++KS+G + Y + DL     +  E   + +
Sbjct: 333 -----------EGARVIF---VEGFNIPLMVVKSNGGFNYASTDLTALWYRLNEEKAEWI 378

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKA------QINVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+       +       A              ++N +   LV    +    +   RA +
Sbjct: 379 IYLTDLGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGADNK---RFRTRANE 435

Query: 407 FITLRHVVDEVGSDS--------------------------VRFMMLWRKNSELLDFDFC 440
            + L  ++DE    S                            +  L         F F 
Sbjct: 436 VVRLVDLLDEAKDRSKAALIERGMDKEWTPEELDQTAEAVDTVYADLKTNRLTGYTFSFD 495

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++    K +   Y+ YA+AR  SI R++         D+       + +    +E  L +
Sbjct: 496 QMLN-DKGDTAVYLLYAHARICSIIRKSG-------KDIDELKKTGKIALDHAAERALGL 547

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL ++   +E A     P  L  YLY L+  F   +S+ +       V  +  +    RL
Sbjct: 548 HLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQ-------VNGSAEE--TSRL 598

Query: 561 QLVHAVASIINSGLNIIGVESP 582
            L  A A ++     ++G+   
Sbjct: 599 LLCEATAIVMRKCFYLLGITPV 620


>gi|134045611|ref|YP_001097097.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166232803|sp|A4FXF3|SYR_METM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|132663236|gb|ABO34882.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 566

 Score =  349 bits (896), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 138/614 (22%), Positives = 248/614 (40%), Gaps = 83/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + +   LK+   ++   +     I ++ P     G  STN +  L++ L   P  IA
Sbjct: 2   DVENLIITTLKDKVRELTGNEM---DIRLDEPPAINMGDYSTNISFRLAKDLKKAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I   + I    + +  A  G+IN +++ S   K   S + +  E    L  +  KV +
Sbjct: 59  EDIANSLSILGI-EKIE-AVNGYINFFMNYSDFSKETVSKISAEKENFGKLEKRDEKVIL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  SANP GP H+GH R  V+GD+L  ++  SGY+V  +YY+ND G Q   +        
Sbjct: 117 EHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVETQYYVNDMGRQEAIVVFGNERFE 176

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK-------YSSELLNFPEEKWLPIVKDYSV 238
                  D  + E Y     L    +EL  +       Y        E +     K+ +V
Sbjct: 177 LDKSKKADHAIGEVYVETNKLLAENEELEQEILNLMKNYEEACEAGIENELTEKFKN-AV 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +   ++ L  LNI HD F+ E +F +     +RD+I  L   G V E  +       
Sbjct: 236 DYSLGGFKETLSTLNIYHDKFVWESEFVK--SGMVRDVIKRLMDTGKVVEDEV------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                          +  G +    L + +G+  Y   D+ Y   K E   D  + ++G+
Sbjct: 287 ----------FRLDLSDYGLEKKLVLARLNGTSLYSTRDIVYHINKME-NCDFAVNLLGA 335

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH      +    A +   +A   V+  E + L        MS R G FI++  + +E  
Sbjct: 336 DHKLTAVMVNKTLALLGYNEA--EVVFYEFISLPEG----SMSTRRGRFISMDELFEEAK 389

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    +   +VR+ ++     + + F + +  +  K    
Sbjct: 390 SRAAEEVRKRGVAENEEEIEEIAKRIAVGAVRYNIVRIAPEKPMVFRWDEALDFEKVGC- 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+ARC  I    + I  D  F            E + +E  ++  L++ P+++E 
Sbjct: 449 PVIQYAHARCSRILENVETISNDNLFAY----------EMNENEKTIVKLLSKLPKIVEK 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   ++P  +A Y+ D+A  F+  +++         ++  N  +   RL +V+   +++ 
Sbjct: 499 AAEVRKPQIVANYVLDVAQGFNKFYANC------PVLKEENETIKNSRLAIVNTTKTVLE 552

Query: 572 SGLNIIGVESPNEM 585
           + L+++G+E P +M
Sbjct: 553 NTLDLLGIEMPGKM 566


>gi|288800432|ref|ZP_06405890.1| tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332645|gb|EFC71125.1| tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 606

 Score =  349 bits (895), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 119/642 (18%), Positives = 241/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F  ++ + +     ++  ++  ++++ +++ +    GHL T       +     P   A+
Sbjct: 3   FEEQICSSILRAVKELYGQEVPVEQVQLQKTKSTFEGHL-TLVVFPFVKLSKKKPEDTAQ 61

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I   +        S F   KGF+N  ++P      L++I        + +      V I
Sbjct: 62  EIGDFVAQHCSNLVSGFNVVKGFLNFVVAPQAWVSQLNTIATEEHFGEKAVQNDSPLVMI 121

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+ S N   P+H+GH R  ++G +L+ +M  +G +V +   +ND G  I    L+ + ++
Sbjct: 122 EYSSPNTNKPLHLGHVRNNLLGWSLSQIMQANGNKVVKTNIVNDRGIHICKSMLA-WQKW 180

Query: 186 QQALYNNDSDLPEGYYPGV-------YLKHVGKELADKYSSELLNFPE------------ 226
                   S     +  G        + K   KEL  +Y +E L   +            
Sbjct: 181 GNGETPETSGKKGDHLVGDCYVAFDKHYKEECKELQKQYIAEGLTEEQAAEQAKEEAPLI 240

Query: 227 -EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPI 273
            E    +VK    D  V+++  ++         +  K + +  D    E D +      +
Sbjct: 241 KEARQMLVKWEQNDPEVRSLWSMMNNWVYAGFDETYKKMGVSFDKIYYESDTYLEGKGKV 300

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            + +     +G  +                 D   +    +  G D  + LL+SDG+  Y
Sbjct: 301 EEGL----AKGLFFRK---------------DDNSVWADLSNEGLD-QKLLLRSDGTSVY 340

Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+     ++ E   D MIYV+G++ + + + L  +   +     +  V     +   
Sbjct: 341 MTQDIGTADLRFKEFPIDKMIYVVGNEQNYHFQVLSILLDRLGFSWGKDLVHFSYGMVEL 400

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            +G   KM  R G  +    ++ E                             VG  +++
Sbjct: 401 PNG---KMKSREGTVVDADELMVEMINDAKEASDKADKLKDMSEEERAEIARIVGLGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY +AR  SI R+A         ++    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTHARICSILRKANAE------NIAIPA 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            + +++  +  E  LI  L+EY   ++ A     P  +A Y Y+L   F+  +       
Sbjct: 511 TLAEDAPLNEKETALIQKLSEYEMAVQQAGKDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   +    M+RL L  +VA +I +G+ ++G+E P  M
Sbjct: 566 -YTILGEADNNKKMVRLVLAKSVAKVIKNGMRLLGIEVPERM 606


>gi|15639817|ref|NP_219267.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026055|ref|YP_001933827.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094412|sp|O83803|SYR_TREPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238689346|sp|B2S469|SYR_TREPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3323142|gb|AAC65797.1| arginyl-tRNA synthetase (argS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018630|gb|ACD71248.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060187|gb|ADD72922.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 589

 Score =  349 bits (895), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 110/619 (17%), Positives = 232/619 (37%), Gaps = 79/619 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
              +   L ++     VE     ++V+E P +   G ++     + ++ +   P  +A+ 
Sbjct: 9   RHAVARVLSQL-QGPAVEPVEGAQLVMEEPPEPGMGDIAFPL-FLFAKRVRRSPAQLAQQ 66

Query: 68  IVARIKIDPDVDS---VFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKV 123
           +   ++ D  + +       G  ++N++L+   +    L +I   G  YG     +G ++
Sbjct: 67  LCTLLEEDTSMCAYGTPQARGP-YLNVFLNKECVAAHTLDAIFAQGERYGHTQYLQGKRI 125

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EF S N   P+HVGH R   +G++L+ ++AF G +V +   IND G  I   ++  + 
Sbjct: 126 MVEFSSPNTNKPLHVGHLRNNAIGESLSRIIAFCGADVFKVNIINDRGVHICK-SMCAYQ 184

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKW--LPIVKD 235
           ++        + +    + G +            E A+    +LL   E     +  +  
Sbjct: 185 KFAHGKTPAHTGIKSDRFVGDWYVQFNRYAQQYPEEAEHDVRDLLQRWESADPHVRALWR 244

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +  ++ I+   +   I  D    E + +      +R  +      G  Y+       
Sbjct: 245 TMNEWALRGIKQTYERTGISFDKLYFESETYTKGREEVRRGL----ACGVFYQ------- 293

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354
                   M+   +    + +G D  + LL+SDG+  Y   D+     +  +  FD ++Y
Sbjct: 294 --------MEDNSIWVDLSSLGLDK-KALLRSDGTTMYITQDIGTAIFRAQDWPFDQLLY 344

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+G++ + + K L  V   +    A Q++ +   +V L       +M  R G  +    +
Sbjct: 345 VVGNEQNYHFKVLFFVLRLLGYPWAQQLHHVSYGMVNLPHG----RMKSREGTVVDADDI 400

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +D                            V   ++ + +L     + + F   +     
Sbjct: 401 LDRLHSAAEEEIAKKGRENALKHAQCIAENVAIAALHYFLLQVSPQKDMVFHPEESLSF- 459

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QY  AR  S+ ++ ++   D++                 +E +L+  LA +P
Sbjct: 460 NGNTGPYLQYMGARISSLLKKVQE---DVEQKGPREVRCDPALLTHEAEWELVKALARFP 516

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             +  A    +P  +  YLY L+  F   +           +          RL+LV AV
Sbjct: 517 ACVTRAAQGHDPSVITGYLYTLSKSFSRFYHDC------PILCEARPDYACARLELVRAV 570

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ + + ++ +    EM
Sbjct: 571 RIVLRTAMRLVLIPFLEEM 589


>gi|308158755|gb|EFO61320.1| Arginyl-tRNA synthetase [Giardia lamblia P15]
          Length = 621

 Score =  349 bits (895), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 119/615 (19%), Positives = 224/615 (36%), Gaps = 84/615 (13%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLG--------LDPLTIAELI---------- 68
            IL   +I    +  +GH   N+ M +++ +          +P  ++ L           
Sbjct: 35  GILTSPLITPTTNIKYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDK 94

Query: 69  -VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNI 125
                     +++V IAG  FIN+ L+P YL      I ++       +     G  V +
Sbjct: 95  YAEAKGCPKPIEAVNIAG-SFINIVLTPEYLLSKCFDIYMAVPFGALPKPPTLPGKCVAV 153

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++GD++  L  +  Y+V R  ++ D G Q   L   +   +
Sbjct: 154 DFSSPNVAKSMHVGHLRSTIIGDSICRLYEYVKYKVHRINHVGDWGTQFGMLITYLTDMH 213

Query: 186 QQ-----ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            +     A     + LP       Y K      A +      +F +  +         +A
Sbjct: 214 PEIADAAAHCKRITMLPIDNLVAFYKK------AKERFDSDPDFQKRAY---------EA 258

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++K+ R +L    + + I        +     +   ID      Y ++      + K   
Sbjct: 259 VVKLQRLNLAEFYLWYKICDISRHEFQRIYDRLDIKIDEFGESSYKFKLGTTVARLKRLH 318

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359
              M  K  +    + G D    ++KSDG +TY   D+A    + +    D  +YV+ + 
Sbjct: 319 LTQMSDKATVIP--IEGMDYPLIIVKSDGGFTYDTTDMAAIYHRTQVLHADKCVYVVDAG 376

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            S +   +   A           V +   V L  DG   ++  RAG+ + L  ++DE   
Sbjct: 377 QSSHFDLVFKAAEKAGWITKNQAVHVPFGVVLGNDGK--RLKTRAGETVKLEDLLDEAVT 434

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  +V++  L     +   +D  ++    K N 
Sbjct: 435 ESMRLLEERNRDQEFSQEEMRRVAEAVGYGAVKYADLSSHRIKDYKYDPKRMLNL-KGNT 493

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ Y++ R  SI R+A     +    L+  + +   S  D SE+ L+V L +    I 
Sbjct: 494 AAYLLYSFTRISSICRKAGVNREE----LYTSDTLKNLSITDPSEINLLVALLKVHDTIL 549

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P+++  ++Y +AS +   +   R    +   ++ +      RL L       +
Sbjct: 550 FTLEDLCPHRICDWVYSVASAYTDFYEKCR---VIETSESGDSICNKSRLALCEMTRQSL 606

Query: 571 NSGLNIIGVESPNEM 585
               +++G+   + M
Sbjct: 607 RLAFHLLGIREIDRM 621


>gi|313906013|ref|ZP_07839366.1| arginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469126|gb|EFR64475.1| arginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 588

 Score =  349 bits (895), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 117/621 (18%), Positives = 230/621 (37%), Gaps = 86/621 (13%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           + + + +       +KK     +  RP  C       N AM   +  G  P+ IA  +V 
Sbjct: 8   ITDEMSKAFEAAGYDKKYARVTISNRPDLCE---YQCNGAMAAKKEYGKAPIQIANEVVE 64

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +K     +SV     GFINL +S  YL   +  +           + +   V I++   
Sbjct: 65  GMKDSEVFESVEAVMPGFINLKVSSEYLGAYIDKMAGD-ENLSVEPVSEPKTVVIDYGGP 123

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N   P+HVGH R A++G+++  +    G  +  + ++ D G Q+  +   +  R  +  Y
Sbjct: 124 NVAKPLHVGHLRSAIIGESIKRMGRRLGDHMIGDVHLGDWGLQMGLIITELQERKPELPY 183

Query: 191 NNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMK 243
            ++S   + PE     +         A   S E  ++ E+      +        +A+ K
Sbjct: 184 FDESFEGEYPEEAPFTISELEEIYPTASGKSKEDESYKEKALQATAELQAGRRGYRAIWK 243

Query: 244 II--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            I        + + + L++  D++  E D        I  ++D + + G+ YE       
Sbjct: 244 HIINVSVSDLKKNYQKLDVDFDLWNGESDAQPY----IPPMVDKMKKDGFAYE------- 292

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                    D+  L+       D  + P   +LKSDG+  Y   DLA    +  +   D 
Sbjct: 293 ---------DQGALIVDVAEETDQKEVPPCMILKSDGAALYTTTDLATIVQRRDDYKPDE 343

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++YV+      +  +    A         +    L       +DG P K   R G  + L
Sbjct: 344 ILYVVDKRQEMHFIQTFRCARKTGLVDDNLKFSFLGFGTMNGKDGKPFK--TREGGVMRL 401

Query: 411 RHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            +++ +                          VG  ++++  L  + S+   FD  +   
Sbjct: 402 ENLIRDINEEMFKKIVENRSVKDTDAEKTAQIVGLSAIKYGDLSNQASKDYVFDVDRFTS 461

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+ Y   R +SI  +  +    LD                  E +L++ LA 
Sbjct: 462 F-EGNTGPYILYTIVRIKSIIGKFAEAGGSLDGAKIIAPA-------GEQEKKLMLQLAR 513

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           Y   +  A   + P++L  Y+Y+L++ F+  +         + +   N +  +  L+L+ 
Sbjct: 514 YNDALTGAYADKAPHRLCSYIYELSNDFNSFYHDN------KILTEENEERKLSWLRLLS 567

Query: 565 AVASIINSGLNIIGVESPNEM 585
               ++   ++++G ++P  M
Sbjct: 568 LAQRVLEDAIHVLGFDAPERM 588


>gi|198275364|ref|ZP_03207895.1| hypothetical protein BACPLE_01525 [Bacteroides plebeius DSM 17135]
 gi|198271700|gb|EDY95970.1| hypothetical protein BACPLE_01525 [Bacteroides plebeius DSM 17135]
          Length = 605

 Score =  348 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 128/647 (19%), Positives = 241/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +  + N +K +    +V  K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLTESILNGIKTL-YNQEVPAKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + +   KGF+NL ++     ++L+ I        +      
Sbjct: 56  PEQTAQEIGEYLKQNEPAIANYNVIKGFLNLTIASDVWIELLNRIHTDNQWGIQKADNNA 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G  LA++MA +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGSALANIMAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN---------- 223
            + +Y        S     +  G Y        K   KEL  +Y +E +N          
Sbjct: 176 -WLKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELMAQYQAEGMNEEEAKAKAEA 234

Query: 224 -----FPEEKWLPIVK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                    + L   +  D  V+A+ K +         +  K + +  D    E   +  
Sbjct: 235 NSPLMLEAREMLRKWEANDPEVRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESQTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G  Y                 +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGLFYRK---------------EDGSVWADLTPEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++                              VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEAMIETAKETSNELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +SI R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSILRKATEAGLSI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                VIP   E  T E  LI  LA++  +++ A     P  LA Y YDL   ++  +  
Sbjct: 508 ---PAVIPSGIELSTKEEGLIQMLADFTNIVKQAGTDYNPSILANYAYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  L + RL L   V  ++   + ++G+E P  M
Sbjct: 565 ------FSILREENEALKIFRLALSQNVGKVVKLAMGLLGIEVPERM 605


>gi|308487658|ref|XP_003106024.1| CRE-RARS-1 protein [Caenorhabditis remanei]
 gi|308254598|gb|EFO98550.1| CRE-RARS-1 protein [Caenorhabditis remanei]
          Length = 711

 Score =  348 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 128/620 (20%), Positives = 241/620 (38%), Gaps = 72/620 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD-- 60
           +     S  K  + E    +         +++    +   G     +AM ++  L ++  
Sbjct: 127 ILGRLQSLFKRAISEAFPGLDAP------LLLAETPNPQFGDYQCTSAMPIAAKLKINGI 180

Query: 61  ---PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              P  + + I A++  +   ++ + +   GFIN++L   Y+R  +S +   GI   +  
Sbjct: 181 NKKPADVGKEINAKLPKNIDFIEKIIVMPAGFINIFLKTDYIRSQVSLLASKGISLPK-- 238

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                +V ++F S N    MHVGH R  ++GD++  L    G++V R  +I D G Q   
Sbjct: 239 -VAKKRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFESVGFDVLRVNHIGDWGTQFGM 297

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L   ++ R+   L    + LP+             +L   Y      F E++        
Sbjct: 298 LIAHLYDRFPDFL----NKLPD-----------ISDLQAFYKESKKRFDEDESFKKRAYE 342

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            V  +     D +KA N   D+    +   +      I+D+ ++   Q  + + +    +
Sbjct: 343 CVVKLQSHDGDIVKAWNTICDVSKKYNQIVYDYLDIKIKDVGESFY-QDKMVDLVKWIKQ 401

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
           +K     + D +Q++F S   G DV   ++KSDG +TY  +DLA  K +  E   D  IY
Sbjct: 402 NKPDMLREEDGRQIMFPS---GCDVPLTVVKSDGGFTYDTSDLAALKYRMLEEKVDWNIY 458

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ +  S +++ + A              +      L       K   R+G+ + L  ++
Sbjct: 459 VVDAGQSLHLETVYAAGRDFGWYDESKQRVEHVGFGLVLGDDKKKFKTRSGETVRLLDLL 518

Query: 415 -----------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                        D V    V++  L    ++   F F ++ + 
Sbjct: 519 SEGVKRATEKLKEKKREAVMTEEELTTARDAVAFGCVKYADLSHTRTQDYVFSFDRMLD- 577

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAYAR RSI R +      L   +    V+P       +EL+L  HL + 
Sbjct: 578 DRGNTAVYLLYAYARIRSIVRTSGVNDTQLAEYVSNTPVLP---LNHPAELKLAKHLLKL 634

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              I     +   +++  Y+Y LA++FH  ++      +          +   RL L   
Sbjct: 635 SDCILLVLDSLMLHQVCDYVYQLATLFHDFYNECYVIEKK---GDEPPVVHFHRLALCEV 691

Query: 566 VASIINSGLNIIGVESPNEM 585
            A++I++   I+G+    +M
Sbjct: 692 TANVISTCFKILGIREVPKM 711


>gi|282878825|ref|ZP_06287592.1| arginine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299033|gb|EFA91435.1| arginine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 606

 Score =  348 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 123/642 (19%), Positives = 243/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ + +     ++  +   +  + +++ +    G+L T       +     P   A+
Sbjct: 3   IENQIASSVIASVKELYRQDVPMSMVQLQKTKSNFEGNL-TLVVFPFLKISRQKPEDTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  D    + F   KGF+NL ++      +L+ +        + +  +   V IE
Sbjct: 62  AIGELLVRDCSAVAGFNVVKGFLNLNIAKEAWVGLLNDMHADEKFGEKPVTDQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMQANGNKVVKTNIVNDRGIHICKSMLA-WLKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----------------KHVGKELADKYSSELLNFPE---- 226
                  S     +  G Y                 K +  E  D+ ++E     E    
Sbjct: 181 NGETPESSGKKGDHLIGDYYVAFDKHYRAEVAELKNKFMTDEGLDEEAAENKAKEEAPLM 240

Query: 227 -EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPI 273
            E    +VK    D  V+A+ + +         +  K L +  D    E D +    + +
Sbjct: 241 KEARQMLVKWEQGDEEVRALWQKMNNWVYAGFDETYKTLGVSFDKIYYESDTYLEGKAKV 300

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            + +     +G  +                 D   +    T  G D  + LL+SDG+  Y
Sbjct: 301 EEGL----EKGLFFRK---------------DDNSVWADLTQEGLD-QKLLLRSDGTSVY 340

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+     +++    D MIYV+G++ + + + L  +   +  K  +  V     +   
Sbjct: 341 MTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGMVEL 400

Query: 393 RDGMPIKMSKRAGDFITLRHVV-----------------------------DEVGSDSVR 423
            +G   KM  R G  +    ++                               VG  +++
Sbjct: 401 PNG---KMKSREGTVVDADELIATMIDDARKTSDELGKFKDMSEEEKREIARVVGLGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A      L        
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKAAAEGMAL------PA 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +P ++  +  E+ LI  + ++  VIE A     P  +A Y Y+L   F+  +       
Sbjct: 511 QLPTDAPLNDKEIALIQKMNDFGAVIEQAATDYSPSGIANYCYELTKDFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+ ++  + RL L + VA II +G+ ++G+E P  M
Sbjct: 566 -YSILNADTQEEKLTRLVLANNVAKIIKNGMLLLGIEVPERM 606


>gi|332881403|ref|ZP_08449053.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680779|gb|EGJ53726.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 599

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 124/636 (19%), Positives = 247/636 (38%), Gaps = 94/636 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  +++ + +      +  +    + + +++ +    GHL T       +     P   A
Sbjct: 2   EIENKIVSAVVLGIKTLYGQDIAPETVQLQKTKKEFAGHL-TLVVFPFLKISRKKPEDTA 60

Query: 66  ELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +   +K + P V + F A KGF+NL ++P+    +L+ I                 V 
Sbjct: 61  QELGHFLKTEIPSVVADFNAVKGFLNLVIAPASWIGLLTDIHQDAQFGLTEATDHSPLVM 120

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IE+ S N   P+H+GH R  ++G  LA++MA +G  V +   +ND G  I    L+ + +
Sbjct: 121 IEYSSPNTNKPLHLGHVRNNLLGCALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLK 179

Query: 185 YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK------ 234
           Y        + +   +  G Y     KH  +++ +     +     +   P++K      
Sbjct: 180 YGNGATPESTGIKGDHLIGDYYVAFDKHYKEQIKELMEEGMSEEEAKNEAPLIKEAREML 239

Query: 235 ------DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                 D  V+A+ + + +          KAL +  D    E + +      + + +D  
Sbjct: 240 VKWENNDPEVRALWRKMNEWVYAGFDVTYKALGVSFDKIYYESETYLEGKEKVLEGLD-- 297

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +G  +                 +   +    T  G D ++ LL+SDG+  Y   D+  
Sbjct: 298 --KGLFFRK---------------EDGSVWADLTPEGLD-EKLLLRSDGTSVYMTQDIGT 339

Query: 341 FKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            K ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G   K
Sbjct: 340 AKLRFRDYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPNG---K 396

Query: 400 MSKRAGDFITLRHVVDE------------------------------VGSDSVRFMMLWR 429
           M  R G  +    +V E                              VG  ++++ +L  
Sbjct: 397 MKSREGTVVDADDLVAEMIGSARKMSEDKINKLTDLSEDEANEIARIVGLGALKYFILKV 456

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + + F+  +  +    N   ++QY YAR RSI R+A +    +         +  ++
Sbjct: 457 DARKNMLFNPAESIDF-NGNTGPFIQYTYARIRSILRKASEAGISI------PETLSAQT 509

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           +    E+ LI  LA++P V++ A     P  +A Y YDL   ++  +           + 
Sbjct: 510 DLSEKEISLIQMLADFPNVVKQAGSDYNPSCIANYCYDLVKEYNQFYHD------FSILH 563

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             N      RL L   ++ II +G+ ++G+E P  M
Sbjct: 564 EENENKKTFRLVLSAEISKIIRTGMGLLGIEVPERM 599


>gi|224537594|ref|ZP_03678133.1| hypothetical protein BACCELL_02474 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520791|gb|EEF89896.1| hypothetical protein BACCELL_02474 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 605

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 123/647 (19%), Positives = 239/647 (36%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + N LK +      +     ++ +++ +    GHL T       R     
Sbjct: 1   MNIEDKLVASVINGLKAL----YGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ S   ++L+ I V             
Sbjct: 56  PEQTAQEIGEYLKANEPSIAAFNVIKGFLNLTIASSAWIELLNDIHVDKQYGIVAATDNS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--------------- 225
            + +Y        S     +  G Y     K    +    +  F                
Sbjct: 176 -WSKYGNGETPESSGKKGDHLVGDYYVAFDKHYKAEVKELMAKFQSEGATEEEAKAKAEA 234

Query: 226 -----EEKWLPIVK----DYSVQAMM--------KIIRDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+A+         +   +    + +  D    E + +  
Sbjct: 235 ASPLMNEAREMLVKWEANDPEVRALWAKMNNWVYEGFDETYHKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL++D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMISTAKETSNELGKLDGLSQEEADNIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +  +
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVMRKAAEAGIVIPAE 510

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 511 ------IPVGIELSEKEEGLIQMVADFAAVVKQAGTDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + RL L   VA ++   + ++GVE P+ M
Sbjct: 565 ------FSILREENEAVKVFRLALSENVAKVVRISMGLLGVEVPDRM 605


>gi|260910414|ref|ZP_05917086.1| arginine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635490|gb|EEX53508.1| arginine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 605

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 120/647 (18%), Positives = 238/647 (36%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S +   + +   +   +      + +++ +    G+L T       +   L 
Sbjct: 1   MNI----ESEIIAAVVQAVKECYGQDVPTTMVQLQKTKAEFEGNL-TLVVFPFLKLSKLK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ +   +     V   F   KGF+NL ++P+    +L+ I        + +  + 
Sbjct: 56  PEDTAQQLGDYLAKHCKVVQSFNVVKGFLNLTIAPAAWISLLNRIDSEPRFGEKTVNEQS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G +LA +M  +G  V +   +ND G  I    L+
Sbjct: 116 PLVMVEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNRVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL---------- 230
            + ++        +     +  G Y     +    + +     F  E             
Sbjct: 176 -WKKWGNGATPESTGKKGDHLIGDYYVAFDQHYRAELAELTAKFKAEGMTDEEAEKRAKE 234

Query: 231 --PIVK------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
             P++K            D  V+A+ K +         +  KA+ +  D    E + +  
Sbjct: 235 ESPLMKEAHDMLVRWEQGDEEVRALWKKMNDWVYQGFDETYKAMGVGFDKIYYESETYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + + +     +G  +                     +    +  G D  + LL++D
Sbjct: 295 GKAKVEEGL----AKGLFFRKP---------------DGSVWADLSNEGLD-QKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTADLRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPNG---KMKSREGTVVDADDLMEEMVSAARRTSEELGKFADMTENERNEIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A+     L   
Sbjct: 452 MGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKAEAEGIVL--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                V+P     +  E+QLI  L  +  V+E A     P  +A Y Y+L   F+  +  
Sbjct: 508 ---PTVLPDTLPLNEKEVQLIQKLNSFEAVVEQAGKDYSPSGIANYCYELTKDFNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A + +   +RL L   VA  I +G+ ++G+E P  M
Sbjct: 565 ------YSILNAESGEAKTLRLALAKNVAKTIKNGMQLLGIEVPERM 605


>gi|57641170|ref|YP_183648.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68753983|sp|Q5JGH7|SYR_PYRKO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57159494|dbj|BAD85424.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 642

 Score =  348 bits (893), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 147/666 (22%), Positives = 265/666 (39%), Gaps = 108/666 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           ++ +   R++  L++   ++  +  K+    I  +       G   T  +  L+R     
Sbjct: 2   VYKEVQERVRLALRQALDEMLHEAGKEWDGEITFDDTPSIELGDFGTAVSFQLARVFRKA 61

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIG 118
           P  IAE +V R+K   P+      A  G+IN YL   +  K L   I+  G +YG + +G
Sbjct: 62  PKFIAEELVGRVKEKLPEEIRDVKAVNGYINFYLDYEFFGKALVREILEKGEKYGESELG 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G KV +E  S NPT P+H+GH R AV+GDT+A +M   GY V  + YI+D G Q   + 
Sbjct: 122 SGKKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRKLGYTVEVQNYIDDLGVQFAQVL 181

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA-------------DKYSSELLNFP 225
              +   ++     +++L E      ++ HV   L              DK   EL+   
Sbjct: 182 WG-YLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKKLEENPEVDKEVRELMKKL 240

Query: 226 EE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLA 281
           EE   +   + +  + + +   +      + I +D+   E D  + G       +I+   
Sbjct: 241 EEGDNEIAEVGRKLAERVVRAQMLTTY-RMGITYDLLSWESDIMKSGIFGEAYGLIEKNE 299

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
              +  EG          +K   D K                L +SDG+ TY   D+AY 
Sbjct: 300 NFFWATEGKYKGAFVMDLRKLFPDMKNPFL-----------VLRRSDGTATYTGKDIAYH 348

Query: 342 KCKYER---------------------------------GFDNMIYVMGSDHSGYVKRLE 368
             K+ +                                   D +I V+G++       ++
Sbjct: 349 LWKFGKVKADMLYKLWDRVEDHETWTTAPDGKEMPGKFGRADIVINVIGAEQKHPQMAIK 408

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------------------- 408
                +  + A  N        + R       S R G ++                    
Sbjct: 409 YALQLLGFEDAAENFHHLAYEHVVR--PEGSFSGRKGTWVGFTVDEVLNEAVQRARELVE 466

Query: 409 ---------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                        + + VG  +VR+ ++     +++ F +  V    + +   Y+QYA+A
Sbjct: 467 QKNPNLSDEEKDEIAEAVGVGAVRYNLVKYSPDKVITFRWEDVLNF-EGDSAPYLQYAHA 525

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           RC SI R+A++   + D++          S+    E +LI  LA++P V+E+A    +P+
Sbjct: 526 RCASILRKAEESGVETDWNALLEKA--DFSKLTNREKELIKFLAKFPEVLESAGRDVKPH 583

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YL +LAS+F+  +    ++P L+        +   RL LV AV  ++ +GL+++G+
Sbjct: 584 LVPAYLNELASLFNRFY---MDHPVLK----AEEGIREERLLLVLAVKQVLRNGLDVLGI 636

Query: 580 ESPNEM 585
           ++P  M
Sbjct: 637 KAPERM 642


>gi|229495652|ref|ZP_04389381.1| arginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229317422|gb|EEN83326.1| arginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 603

 Score =  348 bits (893), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 127/631 (20%), Positives = 243/631 (38%), Gaps = 86/631 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             L   +     K+       D+I I++ R    GH  T     L +     P   A  I
Sbjct: 5   ESLNQAITSTLGKLYGATPSPDQIQIQKTRAEFAGHY-TLVVFPLLKLSRKKPEETATEI 63

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +K +    + F   KGF+NL LS +   ++LS+I         ++  +   V +E+ 
Sbjct: 64  GTSLKAEFPWITDFNVVKGFLNLSLSTALWLELLSAIDGDSAWGHTSVTEQSPLVMVEYS 123

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P+H+GH R  ++G++LA ++  +G  V +   +ND G  I    L+ + ++   
Sbjct: 124 SPNTNKPLHLGHVRNNLLGNSLARILTANGKRVVKTNIVNDRGIHICKSMLA-WQKWGNG 182

Query: 189 LYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEE-------KWLPIVK--- 234
           +    +     +  G +     KH   E+AD  +  ++    E       +   +++   
Sbjct: 183 ITPESAGKKGDHLVGDFYVAFDKHYKAEVADLMAQGMIKEEAEAKAPSMVEARDLLRRWE 242

Query: 235 --DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
             D  V A+ +++         +  + L +  D    E + +             L  + 
Sbjct: 243 AGDEEVLALWRMMNQWVYDGFDETYRRLGVDFDKIYYESETY-------------LKGKA 289

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            V  G+      K       +   +    T  G D ++ LL+SDG+  Y   D+   K +
Sbjct: 290 EVLRGLDEGLFVKH------EDGSVWADLTADGLD-EKILLRSDGTSVYMTQDIGTAKMR 342

Query: 345 YE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           YE    D MIYV+G++   + K L  +   +     +  V     +    +G   KM  R
Sbjct: 343 YESYPIDQMIYVVGNEQEYHFKVLSILLDRLGFSFGKSLVHFSYGMVELPNG---KMKSR 399

Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434
            G  +    ++DE                             VG   +++ +L     + 
Sbjct: 400 EGTVVDADDLMDEMIASARAIAQEAGRAALLPEDEMQEVARRVGLGDLKYFILKVDPRKN 459

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F+  +  +    N   ++QY YAR RS+  +A+      +  L     +  ++     
Sbjct: 460 MTFNPEESVDF-NGNTASFIQYTYARIRSLVEKARVAGEAPEAPLTSEAAVRLDNAHSDR 518

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E+ LI  L+EYP ++  A  +  P  +A Y+Y+L   ++  +           ++  +  
Sbjct: 519 EVALIRQLSEYPSIVAEAGKSFSPALIANYVYELVKGYNSFYHDC------PVLREEDDS 572

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL +   VA II   ++++G+E P  M
Sbjct: 573 IRHTRLYISRIVADIIARAMDLLGIEMPERM 603


>gi|171473734|gb|ACB47040.1| putative class Ic arginyl-tRNA synthetase [Micromonospora chersina]
          Length = 572

 Score =  348 bits (893), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 129/616 (20%), Positives = 227/616 (36%), Gaps = 83/616 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    L + L        V    +D +V    R        ++AA+ L+R LG  P  IA
Sbjct: 2   DLEKLLTDRLAPAFA--TVAGGPVDPVV----RRSQRADFQSDAALALARRLGRPPRAIA 55

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             ++ R ++     +  ++G GF+NL ++   L   L S + +    G         V +
Sbjct: 56  TEVLERAELADLCSATEVSGPGFLNLTVADDALAG-LVSALAADPRLGVPEAAAPETVVV 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WR 184
           ++ + N    MHVGH R  V+GD  A L+ + G+ V R  ++ D G     L   +    
Sbjct: 115 DYSAPNVAKEMHVGHLRSTVIGDAAARLLEWLGHRVLRANHLGDWGTPFGMLIEHLVDLG 174

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK---DYSV 238
             +A         + +Y     K    E   + + +    L   +   L + +   + S 
Sbjct: 175 EAEAAQELSMGDLDSFYKAARAKFDADEAFRERARQRVVALQGGDATTLRLWRLLVEQSE 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  + +   DL  + +    F  E  ++      +  ++++L R G +            
Sbjct: 235 RYFLTVY--DLLDVTLTERDFHGESSYN----DLLGPVVEDLDRLGLLRSS--------- 279

Query: 299 TQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
                 D    +F    VG D   +   + KSDG Y Y A DLA  + +    G   ++Y
Sbjct: 280 ------DGAACVFPPGSVGRDGEPLPLIVRKSDGGYGYPATDLAAIRHRTGTLGATRLLY 333

Query: 355 VMGSDHSGYVKRLEAVAAAVSE-------KKAQINVLLCELVRLYRDGM--PIKM----- 400
           V+G     + + + A AA           +      +L    R+ R      +K+     
Sbjct: 334 VVGLPQRRHFEMVYAAAAQAGWLAPPARAEHVGFGSILGPDGRMLRSRASGSVKLVGLLE 393

Query: 401 ----------SKRAGDFITLR--HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                      +R  +        V   VG  +V++  L     +    D+ ++      
Sbjct: 394 EAVARATALARERNPELGEAEAAEVGRAVGIGAVKYADLSSDRHKDYVLDWERMLSLD-G 452

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYA++R RSIFR+A          +  R   P  S  D +E  L   L  +  V
Sbjct: 453 NSAPYLQYAHSRIRSIFRRAG---------VAARPEAPV-SLVDPAERALAFELVGFGAV 502

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +       E + L   L  LA+ F   +      P LR     +  +   RL L    A 
Sbjct: 503 VGAVAENLEFHHLTACLSRLAAAFSAFYERC---PVLR----ADEPVRESRLVLCDLTAR 555

Query: 569 IINSGLNIIGVESPNE 584
           ++  GL+++G+ +P  
Sbjct: 556 VLRQGLHLLGIRTPER 571


>gi|253742171|gb|EES99018.1| Arginyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 621

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 120/638 (18%), Positives = 237/638 (37%), Gaps = 87/638 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLG----- 58
             + + ++L  +  +   ++    +L   +I    +  +GH   N+ M +++ +      
Sbjct: 12  IRAVVGSHLAPLSAQEGWKESMLGVLTSPLITPTTNIKYGHYQLNSTMGIAKIIKDLHYT 71

Query: 59  ---LDPLTIAELIVARI-----------KIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
               +P  ++ LI   I                +++V IAG  FINL L+P+YL      
Sbjct: 72  ELPSNPAELSGLITQEILRVQDEYTKVKGCPKPIEAVNIAG-CFINLMLTPTYLLSKCFD 130

Query: 105 IVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
           I ++       +  +    ++ ++F S N    MHVGH R  ++GD+++ L  + GY+V 
Sbjct: 131 IYMAVPFGSLPKPPVLPKKRIAVDFSSPNVAKSMHVGHLRSTIIGDSISRLYEYVGYDVH 190

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDS-----DLPEGYYPGVYLKHVGKELADKY 217
           R  ++ D G Q   L   +   + +             LP       Y K      A + 
Sbjct: 191 RINHVGDWGTQFGMLITYLTDMHPEIADAAAHCRRVTMLPIDNLVAFYKK------AKER 244

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                +F +  +  +VK         +   +L+   + H I        +     +   I
Sbjct: 245 FDTDADFQKRAYETVVK---------LQHLNLEEFYLWHKICEISRHEFQRIYDRLDIKI 295

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           D      Y ++      + K      +  K  +    + G D    ++KSDG +TY   D
Sbjct: 296 DEFGESYYKFKLGTTVARLKRLHLTQLSDKATVIP--VEGMDYPLIIVKSDGGFTYDTTD 353

Query: 338 LAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +A    + +    D  +YV+ +  S + + +   A           V +   V L  DG 
Sbjct: 354 MAAIYHRTQVLRADKCVYVVDAGQSSHFELVFGAAEKAGWITKGQAVHVPFGVVLGSDGK 413

Query: 397 PIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMML 427
             ++  RAG+ + L  ++DE                             VG  +V++  L
Sbjct: 414 --RLKTRAGETVKLEDLLDEAVAESTRLLEERNRDQEFSQEEVRQIVEAVGYGAVKYADL 471

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                +   +D  ++    K N   Y+ Y++ R  SI R+A     +L     P+++   
Sbjct: 472 SSHRIKDYKYDPKRMLNL-KGNTAAYLLYSFTRISSICRKAGINREELYTTSLPKDL--- 527

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            S  D SE+ L+V L +    I        P+++  ++Y +AS +   +   R    +  
Sbjct: 528 -SIGDPSEINLLVALLKVHDTILFTLDDLCPHRICDWVYSVASAYTDFYEKCR---VIET 583

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++ +      RL L       +    +++G+   + M
Sbjct: 584 SESGDTVCNKSRLALCEMTRQSLRLAFHLLGIREIDRM 621


>gi|53715701|ref|YP_101693.1| arginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|265767354|ref|ZP_06095020.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81380963|sp|Q64MX8|SYR_BACFR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|52218566|dbj|BAD51159.1| arginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|263252659|gb|EEZ24171.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 597

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 116/633 (18%), Positives = 241/633 (38%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   +      +  +     ++ +++ +    GHL T       +     P   A+
Sbjct: 3   IEDKLVTSVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLKMSKKGPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + F   KGF+NL ++ +   ++L+ I         +       V IE
Sbjct: 62  EIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHADAQYGIVSADENAPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA-WQKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
           +      S     +  G Y     KH   E+A+     +     E   P++         
Sbjct: 181 KGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNEAREMLVK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  + + +  D    E + +       ++ +     
Sbjct: 241 WEAGDPEVRALWQMMNNWVYTGFDETYRKMGVGFDKIYYESNTYLEG----KEKVMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ ++                +   +    T  G D  + LL+ DG+  Y   D+   K
Sbjct: 297 KGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    +        V+P   E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVI------PEVLPANIELS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V+  A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 565 EDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|283798365|ref|ZP_06347518.1| arginine--tRNA ligase [Clostridium sp. M62/1]
 gi|291073949|gb|EFE11313.1| arginine--tRNA ligase [Clostridium sp. M62/1]
          Length = 628

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 128/626 (20%), Positives = 244/626 (38%), Gaps = 79/626 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +       +   L     +   ++K +   V  RP  C       N AM  ++     P+
Sbjct: 39  IMKKMIDLIVAELTPAFTECGYDEKYVKVTVSNRPDLCE---YQCNGAMAAAKAYKKKPI 95

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  +V + K       +     GFINL +SP YL   ++ +     +YG         
Sbjct: 96  DIANEVVEKAKESRMFSEIGAVMPGFINLRISPEYLAGYMNEMAAD-EKYGLEETKAPET 154

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I++  AN   P+HVGH R AV+G+++  +  + G+ V  + ++ D G Q+  +   + 
Sbjct: 155 IIIDYGGANVAKPLHVGHLRSAVIGESIKRISRYMGHHVISDVHLGDWGLQMGLIIEELH 214

Query: 183 WRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-- 237
            R  +  Y ++S   + PE     +         A   S     F E       K  S  
Sbjct: 215 DRQPELPYFDESFTGEYPEEAPFTISELEEIYPAASAKSKVDEAFKERAQEATFKLQSGY 274

Query: 238 --VQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              +A+ K I        + +   LN+  D++  E D     P+ I+D+ID    +G  Y
Sbjct: 275 APYRAIWKHIMNVSLKDLKRNYGNLNVSFDLWKGESDAQPYIPALIQDLID----KGLAY 330

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E       S+     D+  +      T   +     + KSDG+  Y  +DLA    + + 
Sbjct: 331 E-------SQGALVVDIAEE------TDSKELPPCIVRKSDGAALYATSDLATIVQREQD 377

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAG 405
              D  IYV+      +  ++  VA      K    ++      +  +DG P K   R G
Sbjct: 378 FHPDRYIYVVDKRQELHFTQVFRVAKKAGIVKDDTKMIFLGFGTMNSKDGGPFK--TRDG 435

Query: 406 DFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             + L H++DE                          +G  ++++  L  + ++   FD 
Sbjct: 436 GVMRLEHLIDEIDEEVYRKIQEKQRVPEEEMRRTAEMIGLAALKYGDLSNQATKDYVFDV 495

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   ++QY   R +SI  +  ++           ++IP       +E +L 
Sbjct: 496 DRFISF-EGNTGPHIQYMVVRIKSILEKYGELMGG------TYSLIPIRPAASETEKKLQ 548

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L  +  V+E+A     P+++  Y+YDL+  F+  +         + +   +R+     
Sbjct: 549 LELCRFGEVVESAFAETAPHRICQYMYDLSDAFNNFY------LVNKIIGEEDREKQAGF 602

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L+     ++N+ ++++G+E+P  M
Sbjct: 603 ISLISLTKDVLNACMDLLGMEAPEHM 628


>gi|257458399|ref|ZP_05623541.1| arginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444203|gb|EEV19304.1| arginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 587

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 126/627 (20%), Positives = 230/627 (36%), Gaps = 82/627 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
           M    D     K  +      +     E    +RI +E P D   G L        ++ L
Sbjct: 1   MN---DIRLLWKESIARALTSMLPEGTEAVTAERIGMETPPDPNLGDLGFPL-FSFAKTL 56

Query: 58  GLDPLTIAELIVARIKIDPDVD---SVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYG 113
              P  IA  ++ +++ DP +     V   G  +IN++L       +IL +I+     YG
Sbjct: 57  RSAPAKIAAELLPKLQADPSLKGKGEVKAVGP-YINVFLPKGETAAQILDTIIDRNENYG 115

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           +     G K+ +EF S N   P+H+GH R   +G++L+ ++ FSG ++ +   IND G  
Sbjct: 116 KTTTLSGKKIMVEFSSPNTNKPLHLGHLRNDAIGESLSRILQFSGADIYKTNIINDRGVH 175

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV----GKELADKYSSELLNFPEEKW 229
           I    L+            +   P+ +   +Y++          A++ + E+L   E   
Sbjct: 176 ICKSMLAYQLFGNGIDPVKEGIKPDKFVGDMYVQFHKYSKDHPEAEEQAQEMLRKWEAGD 235

Query: 230 LPIVKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              +K +       +  I+       +  D    E D  R   +   +I++ L  +G  Y
Sbjct: 236 PETIKLWKKMNGWALQGIQQTYNRTGVSFDKLFFESDVFRKGRA---EILEGLK-KGIFY 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           +                +   +      +G +  + LL+ DG+  Y   D+     ++ E
Sbjct: 292 KD---------------EDGSIWIDLKSIGFEK-KLLLRGDGTSVYITQDIGLAITRHAE 335

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAG 405
             FD +IYV+G++   + K L  +   +  +  + +  L   +V L       KM  R G
Sbjct: 336 WPFDKLIYVVGNEQIYHFKVLFYIMKQLGYEWYSGLYHLAYGMVNLPEG----KMKSREG 391

Query: 406 DFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFD 438
             +    ++ E                           V   ++ + +L     + + F+
Sbjct: 392 TVVDADDLITELKNSALKEIASKGREDAVGNPEEVAEKVALGALHYFLLQVDTIKDMLFN 451

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +       N   Y+QY  AR  SI R+A       +       V   E      E +L
Sbjct: 452 ASESLSF-NGNTGPYIQYMGARISSILRKA----DTEEGKKAKAGVCKPELLNSDIEWEL 506

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  L E+P  ++ A     P  +  YLYDL  +F   +           + A N  +   
Sbjct: 507 LKKLEEFPAQVDKAAAQYAPMFITSYLYDLCKLFSRFYHDC------PILGAENADVAAT 560

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  AV  ++ +   ++ V     M
Sbjct: 561 RLALAKAVYIVLKNATGLVLVPFLEVM 587


>gi|60683639|ref|YP_213783.1| arginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313314|sp|Q5L7Q8|SYR_BACFN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|60495073|emb|CAH09892.1| putative arginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 597

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 116/633 (18%), Positives = 241/633 (38%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   +      +  +     ++ +++ +    GHL T       +     P   A+
Sbjct: 3   IEDKLVTSVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLKMSKKGPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + F   KGF+NL ++ +   ++L+ I         +       V IE
Sbjct: 62  EIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHTDAQYGIVSADENAPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA-WQKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
           +      S     +  G Y     KH   E+A+     +     E   P++         
Sbjct: 181 KGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNEAREMLVK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  + + +  D    E + +       ++ +     
Sbjct: 241 WEAGDPEVRALWQMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEG----KEKVMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ ++                +   +    T  G D  + LL+ DG+  Y   D+   K
Sbjct: 297 KGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    +        V+P   E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVI------PEVLPANIELS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V+  A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 565 EDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|325860461|ref|ZP_08173573.1| arginine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482119|gb|EGC85140.1| arginine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 606

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 121/642 (18%), Positives = 242/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++         ++   +     I +++ R    G+L T     L +     P   A+
Sbjct: 3   IEEQITGAALAAVKELYGTEVPEKMIQLQKTRSDFEGNL-TLVTFPLLKTSHKKPEETAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K +    + F   KGF+NL ++ +    +L+ I        + +      V IE
Sbjct: 62  ELGEYLKKNCKAVADFNVVKGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WLKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL-------KHVGKELADKYSSELL-----NFPEEKWLPIVK 234
             +    +     +  G +        K   ++L ++Y  E +         E+  P++K
Sbjct: 181 NGITPEKAGKKGDHLIGDFYVLFDKHFKEECRQLQEQYEKEGMTPDAAKEKAEQDAPLIK 240

Query: 235 ------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       D  V+A+ + +         +  KAL +  D    E + +      + 
Sbjct: 241 EAHEMLVKWEQGDPEVRALWEKMNSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +    R+G  +                 D   +    T  G D  + LL+ DG+  Y 
Sbjct: 301 EGL----RKGLFFRK---------------DDNSVWADLTKEGLD-QKLLLRKDGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +    
Sbjct: 341 TQDIGTAEMRFNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVV------------------------------DEVGSDSVR 423
           +G   KM  R G  +    +V                                VG  +++
Sbjct: 401 NG---KMKSREGTVVDADDLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A         D+    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAAAQ------DILLPA 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  ++  +  E++LI  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 511 SLADDAPLNEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILSADTEAEKITRLVLAKNVAKVIRNGMALLGIEVPERM 606


>gi|302671208|ref|YP_003831168.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316]
 gi|302395681|gb|ADL34586.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316]
          Length = 589

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 111/627 (17%), Positives = 234/627 (37%), Gaps = 93/627 (14%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             +   + +       ++++    +  RP  C       N AM  ++  G  P  IA+ +
Sbjct: 6   ELISKEVGDAFEAAGYDRELGRVTISNRPDLCE---YQCNGAMAGAKKYGKAPFIIADDV 62

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            AR++ +   D V     GF+N+ +S  + R  +  ++     +G +         I++ 
Sbjct: 63  AARLQDNSMFDKVESVKPGFLNITVSGDFARGYIVKMLHEK-HFGVDRPAHEPTYIIDYG 121

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
             N    +HVGH R AV+G+++  ++ ++G +V  + ++ D G Q+  +   +  R    
Sbjct: 122 GPNVAKSLHVGHLRSAVIGESIKRILKYTGNKVIGDAHLGDWGLQMGLVITELEVRKPDL 181

Query: 189 LYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLNFPEEKWLP-------------- 231
            Y + +      Y G Y K      +EL + Y +      E++                 
Sbjct: 182 CYFDPN------YEGPYPKEAPFTVEELGEIYPAASAKSKEDEAFKAKAMDATKKLQDGY 235

Query: 232 ----IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                +  + +   +  ++ + K LN+  D++  E D     P     +++ +   GY +
Sbjct: 236 KPYRALWHHIMNVSLADLKKNYKNLNVNFDLWKGESDADPVIPG----MVEYMKSHGYAH 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E       S+     D      +   T   +     +LKSDG+  Y   DLA  K + + 
Sbjct: 292 E-------SQGALVVD------VAEETDTKEVPPCMILKSDGASLYNTTDLATIKQRMDD 338

Query: 348 GF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAG 405
              + +IYV+      Y  ++   A        +  +       +  +DG P K   RAG
Sbjct: 339 NHPEGIIYVVDKRQELYFTQVFRCARKTKLVMPETELHFVGFGTMNGKDGKPFK--TRAG 396

Query: 406 DFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFD 438
             + L  ++ E                           +   ++++  L  + S+   FD
Sbjct: 397 GVMPLGDLIAEIDDKMYNRIKEGNPEMPEDEAKDTSHKIALSALKYGDLSNQPSKDYIFD 456

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             K     + +   Y+ Y   R +SI ++ +    ++   L      P   E       L
Sbjct: 457 IEKFTSF-EGDTGPYILYTMVRIKSILKKYEAEGGNVKEALLANPDSPAMKE-------L 508

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           ++ L  +   IE A     P ++  Y+YDL++ F+  +         + +   +      
Sbjct: 509 MLQLTRFADAIEGAAKDFAPNRICAYIYDLSNAFNSFYH------GTKILAEADPDKKSS 562

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
            + L+     ++ +G++++G ++P  M
Sbjct: 563 YIALLATTLKVLETGIDLLGFDAPERM 589


>gi|328353614|emb|CCA40012.1| arginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 642

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 230/617 (37%), Gaps = 82/617 (13%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            L+NY+ +   KI    K L    +E       G L      +  R  G +P  +AE   
Sbjct: 67  LLRNYITQELSKISGVDKELIFPALEWGTTLEKGDLLIPVPRL--RIKGANPKDLAEQWA 124

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFV 128
           A       +  V   G  F+  + + S L K++ S  +  G ++G   +GKG KV +EF 
Sbjct: 125 AAFPKGGYLKDVIAQGP-FLQFFFNTSVLYKLVISDALERGDDFGALPLGKGQKVIVEFS 183

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P H GH R  ++G  +++L    G+EV R  Y+ D G Q   LA+       +A
Sbjct: 184 SPNIAKPFHAGHLRSTIIGGFISNLYEKLGHEVMRMNYLGDWGKQFGVLAVGFERYGDEA 243

Query: 189 LYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSSELLNFP--EEKWLP 231
               D   P  +   VY+K                 G+ L D+  +        +E  + 
Sbjct: 244 KLKTD---PINHLFEVYVKINQDIKAQSESTEEIAEGQSLDDQARAFFKKMENGDESAVS 300

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + K +   ++ K I D    LNI++D++  E    +     + +       +G + E   
Sbjct: 301 LWKRFRELSIEKYI-DTYARLNIKYDLYSGESQVPQ---EIMDEATKIFEEKGLLSE--- 353

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGF 349
                        D+   L   T     + + ++ K DG+  Y   D+     +Y +  F
Sbjct: 354 -------------DQGAKLIDLTKFNKKLGKAIVQKKDGTSLYLTRDVGAAIDRYRKYKF 400

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRL 391
           D MIYV+ S    +  +   +   +  + A+                    V L  ++  
Sbjct: 401 DKMIYVIASQQDLHTAQFFEILKRMDFEWAKNLTHINFGMVLGMSSRKGTVVFLDTILEE 460

Query: 392 YRDGMPIKMSKRAGDF---ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            ++ M   M K    +        V D VG  +V    +  K     +F + ++    + 
Sbjct: 461 TKEKMHDVMRKNDSKYQQIANPEEVADLVGISAVMIQDMQSKRINNYEFKWERMTSF-EG 519

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +   Y+QYA++R  SI R A       D DL            +     L+  LA+YP V
Sbjct: 520 DTGPYLQYAHSRLASITRNA-------DIDLAELPGADFGLLVEPQAEYLVRLLAQYPDV 572

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  +    EP  L  YL+ L       +        + +V    + L   RL L  +   
Sbjct: 573 LRTSLKNHEPSTLVTYLFKLTHQVSSCYD-------VLWVAGQEKPLATARLALYASARQ 625

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +G+ ++G+     M
Sbjct: 626 VLYNGMLLLGLTPVERM 642


>gi|303236237|ref|ZP_07322833.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483551|gb|EFL46550.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 615

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 111/622 (17%), Positives = 237/622 (38%), Gaps = 61/622 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++         ++         I +++ +    G+L T     L +    +P   A+
Sbjct: 12  IEEQITTAALAAVKELYGADVPTQMIQLQKTKANFEGNL-TLVTFPLLKTSRKNPEETAK 70

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I A +K + +  S +   KGF+NL ++P+    +L+ I  +     + +        +E
Sbjct: 71  EIGAYLKDNCNAISDYNVVKGFLNLVIAPAAWIGLLNDIHANEKFGEKQVTADSPLAMVE 130

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +GY+V +   +ND G  I    L+ + ++ 
Sbjct: 131 YSSPNTNKPLHLGHVRNNLLGWSLSKIMEANGYKVVKTNIVNDRGIHICKSMLA-WQKWG 189

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMK 243
             +    +     +  G +     K   ++ ++    F +E   +     K      +MK
Sbjct: 190 NGITPEQAGKKGDHLIGDFYVAFDKHYREELATLTAQFQQEGLDEEAAKAKAEQESPLMK 249

Query: 244 IIRDDLKAL-----NIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPK 295
              D L         ++    +  D  + G     + +    D +  +   Y       +
Sbjct: 250 EAHDMLVKWEANDPEVRALWKMMNDWVYAGFDETYKALGVGFDKIYYESNTYLEGKKKVE 309

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
               +   + ++     + +  + +D + LL+SDG+  Y   D+     +++    D MI
Sbjct: 310 EGLAKGLFIRKEDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTADMRFKDFPIDKMI 369

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+G++ + + + L  +   +  K  +  V     +    +G   KM  R G  +    +
Sbjct: 370 YVVGNEQNYHFQVLSILLDRLGFKWGKGLVHFSYGMVELPNG---KMKSREGTVVDADDL 426

Query: 414 V------------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           V                                VG  ++++ +L     + + F+  +  
Sbjct: 427 VASMIQNARTLSEDKVNKLEDITEEEKNNIARIVGMGALKYFILKVDARKNMLFNPEESI 486

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +    N   ++QY YAR RSI R+A     ++         +   +  +  E+ LI  + 
Sbjct: 487 DF-NGNTGPFIQYTYARIRSILRKANAQGINI------PATVEANAPLNEKEIALIQKMN 539

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++   +  A +   P  +A Y Y+L   F+  +           + A+       RL L 
Sbjct: 540 DFGAAVAQAGVDYSPSGIANYCYELTKEFNQFYHD------YSILNADTEDEKTTRLVLA 593

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA +I +G+ ++G+E P  M
Sbjct: 594 QNVAKVIKNGMELLGIEVPERM 615


>gi|253566485|ref|ZP_04843938.1| arginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251944657|gb|EES85132.1| arginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301165151|emb|CBW24721.1| putative arginyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 597

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 116/633 (18%), Positives = 241/633 (38%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   +      +  +     ++ +++ +    GHL T       +     P   A+
Sbjct: 3   IEDKLVTSVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLKMSKKGPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + F   KGF+NL ++ +   ++L+ I         +       V IE
Sbjct: 62  EIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHADAQYGIVSADENAPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA-WQKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
           +      S     +  G Y     KH   E+A+     +     E   P++         
Sbjct: 181 KGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNEAREMLVK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  + + +  D    E + +       ++ +     
Sbjct: 241 WEAGDPEVRALWQMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEG----KEKVMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ ++                +   +    T  G D  + LL+ DG+  Y   D+   K
Sbjct: 297 KGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    +        V+P   E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVI------PEVLPANIELS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V+  A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 565 EDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|255689975|ref|ZP_05413650.1| arginine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624582|gb|EEX47453.1| arginine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 605

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 122/647 (18%), Positives = 244/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + N LK + C  +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVINGLKAL-CGQEVPEKM---VQLQKTKKEFEGHL-TLVVFPFLKMSRKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLVKATETS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--------------- 225
            + +Y        S     +  G Y     K    +    +  F                
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAQFTAQGMNDEEAKAKAEA 234

Query: 226 -----EEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKMMGVGFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ ++                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVV--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+ ++G+E P  M
Sbjct: 565 ------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPARM 605


>gi|261349916|ref|ZP_05975333.1| arginine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860699|gb|EFC92997.1| arginine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 575

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 143/624 (22%), Positives = 266/624 (42%), Gaps = 90/624 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-------RIVIERPRDCAHGHLSTNAAMILSR 55
           ++ +   +  N + +   K +V+  + +          +E P +   G L++  A  L++
Sbjct: 1   MYFEIEKQAINAISDALDKFEVDDTLENFQVEDEKNFRLEFPPNPDMGDLASTIAFSLAK 60

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            L   P  IA  IV +++I    + V   G  ++N ++  S   K L   V  G +YG  
Sbjct: 61  KLRKAPNLIASEIVEKLEIPEIFEKVEAIGP-YVNFFIDYSNFSKKLLEYV--GKDYG-Q 116

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           L     K+ +E  SANP GP+H+GH R ++ GD+L  L+  +G EV  +YY+ND G QI 
Sbjct: 117 LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRLLKVAGREVETQYYVNDMGRQIA 176

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----YSSELLNFPE---EK 228
            +   +     + + + + D  +     +Y K   K   D+    +   L+   E   E 
Sbjct: 177 IIVFGITELGLK-IEDQEGDKIDHKIGRLYFKANQKLNEDESLVSHVDNLIERYEGGAEP 235

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L  + +  V++ +  I++ L  +NI HD F+ E  F R     + D+I     +G+V  
Sbjct: 236 ELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQFVR--SGEVDDMIKYFDHEGFVSY 293

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G +                      T    + +  L +SDG+  Y   DLAY + K  +G
Sbjct: 294 GDV-----------------TYIDLTCFQIEKEFVLRRSDGTSLYSTRDLAYHRYKATQG 336

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D ++ ++GSDH    +++  +   +  ++    V+  E + L        MS R G F+
Sbjct: 337 -DVVLDILGSDHKLAAQQINVIFKEI-LREIPPEVIFYEFITLPSG----SMSTRKGVFV 390

Query: 409 TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
           ++  +VDE                           +G  ++RF +      + L F + +
Sbjct: 391 SVDELVDEAVKRATDEIKSRNPDLTDEEIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDE 450

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                +      +QYA+AR   + +++      L         +  +   + +E  LI  
Sbjct: 451 ALSFERG--CASIQYAHARACKLLKKSGKDVSSL--------AVSDDWVPNENEKDLIRT 500

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +A++P+VIE+    +  + +  Y  DLAS F+  +   +       V  ++ + T  RL 
Sbjct: 501 IAKFPQVIEDCANKKRIHNITQYCQDLASAFNKFYKAEQ-------VIGSDVEDT--RLV 551

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV    + + + L+I+GV +P +M
Sbjct: 552 LVDRAKTTLKNALDILGVPAPQKM 575


>gi|325002809|ref|ZP_08123921.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 570

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 113/592 (19%), Positives = 217/592 (36%), Gaps = 85/592 (14%)

Query: 38  RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
           R         N A+ L++   + P  +A  +   +     + SV +AG GF+N+ +  + 
Sbjct: 20  RPSGRADFQANGALALAKHAEVPPRDLAAGLADEVSAADVIGSVELAGPGFLNITVPDAM 79

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   +++ +     +G     +G +  +++ + N    MHVGH R  ++GD L  ++ F 
Sbjct: 80  IWSQVAARLGDD-RFGVAAPERGRRTVVDYSAPNIAKEMHVGHLRTTIIGDCLVRVLDFL 138

Query: 158 GYEVTREYYINDAGAQINTLALSV------FWRYQQALYNNDSDLPEGYYPGVYL--KHV 209
           G +V R+ ++ D G Q   L   +       WR      N  +                 
Sbjct: 139 GADVVRQNHLGDWGTQFGMLIQYLDEHPDTTWRLDDLDGNTSAVSALDGLYRNSRATFEA 198

Query: 210 GKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDF 265
             + AD+    ++     +   + +  +   ++  K  R     L +    D  + E  +
Sbjct: 199 DADFADRARRRVVALQSGDPATIAVWSEIVAESE-KAFRGIYDRLGVLLTADDSVGESFY 257

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-- 323
           +      + +++ +                       D D   ++  + + G D +    
Sbjct: 258 NPLLTGTVDELVAD-------------------GIAVDSDDALVILSNEVDGPDGEPVPL 298

Query: 324 -LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            + K DG Y Y   DLA  + +  +   D ++YV  S  S + + +   A         +
Sbjct: 299 MVRKRDGGYGYDTTDLATIRYRIRDLEADRLLYVTDSRQSLHFRLVFEAARRAGWLTEGV 358

Query: 382 NVLLC-ELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
                     L  DG P K   RAG  + L  ++D+                        
Sbjct: 359 RAEHVPYGTVLGPDGRPFK--TRAGGTVRLMDLLDDAVSRARAVVAEKNPDLDPAELDRI 416

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
               G   V++  L     +   FD  ++   +  N   Y+QYA+ R RSI R+A +   
Sbjct: 417 AEQAGIGGVKYADLSTSRVKDYAFDVDRMVSFT-GNTGVYLQYAHTRIRSILRRAGEGSH 475

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +D  +            D +E  L + L  Y  V+ + +++ EP++L  YLY+LA  F 
Sbjct: 476 AVDGGVA----------LDGAERALALALDSYGEVLVDVSMSLEPHRLCGYLYELARAFT 525

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +           V  +   +   RL L    A  +  GL ++G+ +P+ M
Sbjct: 526 SFYEAC-------PVLGSEDPVRGNRLALCRLTARTLGHGLGLLGIAAPDRM 570


>gi|150402195|ref|YP_001329489.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166232804|sp|A6VFW2|SYR_METM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150033225|gb|ABR65338.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 566

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 137/614 (22%), Positives = 248/614 (40%), Gaps = 83/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + +   LK+   ++   +     I ++ P     G  STN +  L++ L   P  IA
Sbjct: 2   DVENLIITTLKDKVEELTGNEM---DIRLDEPPAINMGDYSTNISFRLAKDLKKAPKVIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I   + I    + +  A  G+IN +++ S   K   S ++   E    L  +  KV +
Sbjct: 59  EDIANSLNISGI-EKIE-AVNGYINFFMNYSDFSKETVSKIIDEKENFGKLEKRHEKVIL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  SANP GP H+GH R  V+GD+L  ++  SGY+V  +YY+ND G Q   +        
Sbjct: 117 EHTSANPNGPFHIGHGRNMVIGDSLKRILVASGYDVETQYYVNDMGRQEAIVVFGNEKFE 176

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK-------YSSELLNFPEEKWLPIVKDYSV 238
                  D  + E Y     L    +EL  +       Y        E +     K+ +V
Sbjct: 177 LDKSKKADHAIGEVYVETNKLLAENEELEQEILNLMKNYEEACEAGIENELTEKFKN-AV 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +   ++ L  LNI HD F+ E +F +     +R++I  L   G V E  +       
Sbjct: 236 DYSLGGFKETLSTLNIYHDKFVWESEFVK--SGMVREVIKRLMDTGKVVEDEV------- 286

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                          +  G +    L + +G+  Y   D+AY   K E   D  + ++G+
Sbjct: 287 ----------FRLDLSDYGLEKKLVLARLNGTSLYSTRDIAYHINKME-NCDFAVNLLGA 335

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH      +    A +   +A   V+  E + L        MS R G FI++  + +E  
Sbjct: 336 DHKLTAVMVNKTLALLGYNEA--EVVFYEFISLPEG----SMSTRRGRFISMDELFEEAK 389

Query: 419 ---------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                        +VR+ ++     + + F + +  +  K    
Sbjct: 390 SRAAEEVRKRGVAESEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWDEALDFEKVGC- 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+ARC  I    + I  D  F            E + +E  ++  L++ P+++E 
Sbjct: 449 PVIQYAHARCSRILENVEIISNDNLFAY----------EMNENEKTIVKLLSKLPKIVEK 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   ++P  +A Y+ D+A  F+  +++         ++  N+ +   R+ +V+    ++ 
Sbjct: 499 AAEVRKPQIVANYVLDVAQGFNKFYANC------PVLKEENQIIKNSRIAIVNNTKMVLE 552

Query: 572 SGLNIIGVESPNEM 585
           + L+++G+E P +M
Sbjct: 553 NTLDLLGIEMPGKM 566


>gi|330996517|ref|ZP_08320399.1| arginine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329573073|gb|EGG54692.1| arginine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 599

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 122/636 (19%), Positives = 246/636 (38%), Gaps = 94/636 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  +++ + +      +  +    + + +++ +    GHL T       +     P   A
Sbjct: 2   EIENKIVSAVVLGIKTLYGQDIAPETVQLQKTKKEFAGHL-TLVVFPFLKISRKKPEDTA 60

Query: 66  ELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           + +   +K + P V + F A KGF+NL ++P+    +L+ I                 V 
Sbjct: 61  QELGHFLKTEIPSVVADFNAVKGFLNLVIAPASWIGLLTDIHQDAQFGLTEATDHSPLVM 120

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IE+ S N   P+H+GH R  ++G  LA++MA +G  V +   +ND G  I    L+ + +
Sbjct: 121 IEYSSPNTNKPLHLGHVRNNLLGCALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLK 179

Query: 185 YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK------ 234
           Y        + +   +  G Y     KH  +++ +     +     +   P++K      
Sbjct: 180 YGNGATPESTGIKGDHLIGDYYVAFDKHYKEQIKELMEGGMSEEEAKNEAPLIKEAREML 239

Query: 235 ------DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                 D   +A+ + + +          KAL +  D    E + +      + + +D  
Sbjct: 240 VKWENNDPETRALWRKMNEWVYAGFDVTYKALGVSFDKIYYESETYLEGKEKVLEGLD-- 297

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +G  +                 +   +    T  G D ++ LL+SDG+  Y   D+  
Sbjct: 298 --KGLFFRK---------------EDGSVWADLTPEGLD-EKLLLRSDGTSVYMTQDIGT 339

Query: 341 FKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            K ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G   K
Sbjct: 340 AKLRFRDYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPNG---K 396

Query: 400 MSKRAGDFITLRHVVDE------------------------------VGSDSVRFMMLWR 429
           M  R G  +    +V E                              VG  ++++ +L  
Sbjct: 397 MKSREGTVVDADDLVAEMIGSARKMSEDKINKLTDLSEDEANEIARIVGLGALKYFILKV 456

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + + F+  +  +    N   ++QY YAR RSI R+A +    +         +  ++
Sbjct: 457 DARKNMLFNPAESIDF-NGNTGPFIQYTYARIRSILRKASESGISI------PETLSAQT 509

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           +    E+ LI  LA++P V++ A     P  +A Y YDL   ++  +           + 
Sbjct: 510 DLSEKEISLIQMLADFPNVVKQAGSDYNPSCIANYCYDLVKEYNQFYHD------FSILH 563

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +      RL L   ++ II +G+ ++G+E P  M
Sbjct: 564 EEDENKKTFRLVLSAEISRIIRTGMGLLGIEVPERM 599


>gi|45358589|ref|NP_988146.1| arginyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74554456|sp|Q6LYG5|SYR_METMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|44921347|emb|CAF30582.1| Arginyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 566

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 137/614 (22%), Positives = 248/614 (40%), Gaps = 83/614 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + +   LK+    +   +     I ++ P     G  STN +  L++ L   P  IA
Sbjct: 2   DVENLIITTLKDKVKGLTGNEM---DIRLDEPPAINMGDYSTNISFRLAKDLKKAPKMIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E I   + I    + +  A  G+IN +++ S   K   S +    E    L  +  KV +
Sbjct: 59  EDIANSLSILGI-ERIE-AVNGYINFFMNYSDFSKETVSKISDEKENFGKLEKRNEKVIL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  SANP GP H+GH R  V+GD+L  ++  SGY+V  +YY+ND G Q   +        
Sbjct: 117 EHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVETQYYVNDMGRQEAIVVFGNEKFE 176

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK-------YSSELLNFPEEKWLPIVKDYSV 238
                  D  + E Y     L    +EL  +       Y S      E +     K+ +V
Sbjct: 177 LDNSKKADHAIGEVYVETNKLLAENEELEQEILNLMKNYESACEAGIENELTEKFKN-AV 235

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +   ++ L  LNI HD F+ E +F +     +R++I+ L   G V E  +       
Sbjct: 236 NYSLGGFKETLLTLNIYHDKFVWESEFVK--SGMVREVINRLMNTGKVVEDEVYR----- 288

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                          +  G +    L + +G+  Y   D+AY   K E   D  + ++G+
Sbjct: 289 ------------LDLSDYGIEKKLVLARLNGTSLYSTRDIAYHITKME-NCDFAVNLLGA 335

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH      +    A +   +A   V+  E + L        MS R G FI++  + +E  
Sbjct: 336 DHKLTAVMVNKTLALLGYNEA--EVVFYEFISLPEG----SMSTRKGRFISMDELFEEAK 389

Query: 419 ---------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                        +VR+ ++     + + F + +  +  K    
Sbjct: 390 SRAAEEVRKRGVAQSEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWDEALDFEKVGC- 448

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+ARC  I    ++I  +  F            + + +E  ++  L++ P+++E 
Sbjct: 449 PVIQYAHARCSRILENVENISNENLFAY----------DMNENEKTIVKLLSKLPKIVEK 498

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   ++P  +A Y+ D+A  F+  +++         ++  N  +   RL +V    +++ 
Sbjct: 499 AAEVRKPQIVANYVLDVAQGFNKFYANC------PVLKEENETVKNSRLAIVSTTKTVLE 552

Query: 572 SGLNIIGVESPNEM 585
           + L+++G+E P +M
Sbjct: 553 NTLDLLGIEMPGKM 566


>gi|325299512|ref|YP_004259429.1| Arginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319065|gb|ADY36956.1| Arginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 597

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 124/633 (19%), Positives = 234/633 (36%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   + +   K+   +     + +++ +    GHL T       +     P    +
Sbjct: 3   IEDKLTASVIDGVKKLYGAEITPAMVQLQKTKKEFAGHL-TVVVFPFLKLSKKGPEQTGQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + +   KGF+NL ++      +L+ I        R    K   V IE
Sbjct: 62  EIGEYLKANEPAIADYNVIKGFLNLTIASDVWIDLLNRIHADAQWGIRKADEKAPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA++MA +G  V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
                  S     +  G Y     KH   E+A+     L     E   P+++        
Sbjct: 181 NGETPESSGKKGDHLIGDYYVAFDKHYKAEVAELMEKGLSKEEAEAQSPLMQEAREMLRK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ + +         +  K + +  D    E + +      + + +     
Sbjct: 241 WEAGDPEVRALWEKMNNWVYAGFDETYKMMGVSFDKIYYESNTYLEGKKKVLEGL----E 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D  + LL++DG+  Y   D+   +
Sbjct: 297 KGIFYRK---------------EDGSVWADLTPEGLD-QKLLLRADGTSVYMTQDIGTAE 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 QRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    +++                              VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMEAMIQTAKETSNELGKLDGLTQEEADDIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR +SI R+A +    +        VIP   E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIQSILRKAAEAGITI------PAVIPAGMELT 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  LA++   ++ A     P  LA Y YDL   ++  +           ++  N
Sbjct: 511 AKEEGLIQMLADFTATVDQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L + RL L   V  I+   + ++G+E P  M
Sbjct: 565 EALKVFRLALSQNVGKIVKEAMGLLGIEVPERM 597


>gi|258648951|ref|ZP_05736420.1| arginine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850551|gb|EEX70420.1| arginine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 642

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 118/626 (18%), Positives = 232/626 (37%), Gaps = 70/626 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   + E    +  E      I +++ +    GHL T       R     P   A+
Sbjct: 40  IEEKMAIDVVEALQALYGETIAPTSIQLQKTKREFEGHL-TLVVFPFLRISRKKPEETAQ 98

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I A +K   +V + F   KGF+NL +  +     L+ I  +     + +      V IE
Sbjct: 99  EIGAYLKEHSNVVADFNVVKGFLNLCIDSAAWIDTLNDIHTAENYGLQPVTADAPLVMIE 158

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N   P+H+GH R  ++G +LA ++  +G  V +   +ND G  I    L+ + +Y 
Sbjct: 159 FSSPNTNKPLHLGHVRNNLLGWSLAKILEANGNRVVKTNIVNDRGIHICKSMLA-WLKYG 217

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-----------KWLPIVKD 235
                  S     +  G Y     K   ++ +       +E           +    +  
Sbjct: 218 HGETPESSGKKGDHLIGDYYVAFDKHYREQVNELKARLEKEGLTADAAKEQAEREAPLMK 277

Query: 236 YSVQAMMKIIRDDLKALNIQ----HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            + + ++K  ++D +   +     + ++   D  +R     +    D +  +   Y    
Sbjct: 278 EAREMLVKWEQNDPEVRGLWEKMNNWVYAGFDQTYR----ALGVGFDKIYYESKTYLDGK 333

Query: 292 PPPKSKTTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348
                   Q      D   +       G D  + LL++DG+  Y   D+     ++ +  
Sbjct: 334 AKVLEGLAQGLFFRKDDGSVWIDLAADGLD-QKLLLRADGTSVYMTQDIGTATQRFNDYD 392

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D MIYV+G++   + K L  +   +  K  +  V     +    +G   KM  R G  +
Sbjct: 393 IDKMIYVVGNEQDYHFKVLSLLLDKLGFKWGKELVHFSYGMVELPNG---KMKSREGTVV 449

Query: 409 TLRHVV-----------------------------DEVGSDSVRFMMLWRKNSELLDFDF 439
               ++                               VG  ++++ +L     + + F+ 
Sbjct: 450 DADDLIAAMQDEAAETIEAAGKFEDRPAEEKQEVARIVGLGALKYFLLKVDARKNMVFNP 509

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +  +    N   ++QY YAR RS+ R+A++    +   L         ++    E  ++
Sbjct: 510 EESIDF-NGNTGPFIQYTYARIRSVIRKAEEGGISIPATLAAG------AKLSDKEESIV 562

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LAE+P ++  A     P  +A Y YDL   ++  +           ++  + +    R
Sbjct: 563 QRLAEFPAIVRQAGAEYAPNAIANYCYDLVKEYNQFYHD------FSILREADEEKKRFR 616

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L   VA +I +G++++G+E P  M
Sbjct: 617 LVLSANVAKVIRTGMSLLGIEVPERM 642


>gi|308800206|ref|XP_003074884.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri]
 gi|116061434|emb|CAL52152.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri]
          Length = 603

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 125/597 (20%), Positives = 220/597 (36%), Gaps = 77/597 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL------- 59
               L++ +++           L+ + I    + + G    ++AM +   L         
Sbjct: 64  IKESLESAVRDKFSDY------LETVDITECANPSLGDYQCSSAMQIFSALRKAGETDFC 117

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A +IV  I      DS+ IAG GFIN  LS  ++   L  +   G        G+
Sbjct: 118 NPREVAAVIVDGISDTTTFDSITIAGAGFINFKLSDHFILTRLREL---GKTVKPTSSGE 174

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V ++F S N    MHVGH R  ++GD L ++  F G +  R  ++ D G Q   L  
Sbjct: 175 SGSVLVDFSSPNIAKEMHVGHLRSTIIGDALCNVFEFCGLKTIRLNHVGDWGTQFGMLI- 233

Query: 180 SVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKD 235
              +     +  +   SDL E Y           +   +    ++     +   L   K 
Sbjct: 234 --QFMTDNKVSPDSAVSDLQECYKRAKERFDQDDDFKSQSKQAVIKLQSYDADALRTWKQ 291

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                +    R + + +  + +I I E    ++      I  ++D L  +  V E     
Sbjct: 292 -----ICDASRAEFQTIYDRLNISIIERGESYYN---DMIPAVLDELVAKNVVVE----- 338

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352
                      D   L         +      KSDG + Y + DLA  + +  E   D +
Sbjct: 339 -----------DAGALCIFDDDHA-EAPVICRKSDGGFNYASTDLAAIRHRALEEKVDRI 386

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           IYV       + + +   A A           V L  L+    +   ++  K  G  ++ 
Sbjct: 387 IYVTDQGQQKHFRAIFKTAHAAGWGHGASGETVKLKSLLDEAEE-RCLQFLKEKGTDLSA 445

Query: 411 RHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
             +      +G  SV++  L         F F ++ +  K N   Y+QY++AR  +I R+
Sbjct: 446 EELSTASRILGVSSVKYADLHNNRLTAYTFSFDRMLDL-KGNTAMYLQYSHARVATILRK 504

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A    P LD    P + +  E   + +E  L VHL +   V+        P K+  YLY 
Sbjct: 505 A----PTLD---LPLDGLHFE---NAAERLLAVHLIKLDDVLAATMKELAPSKICDYLYT 554

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L ++F+  ++        + +   N      RL L    A+ +    +++G+E    
Sbjct: 555 LCTMFNNFYAEC------KVIGGENEA---SRLFLCMRTAATMKIAFSLLGMEPLER 602


>gi|254570523|ref|XP_002492371.1| Arginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238032169|emb|CAY70124.1| Arginyl-tRNA synthetase [Pichia pastoris GS115]
          Length = 657

 Score =  346 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 133/617 (21%), Positives = 230/617 (37%), Gaps = 82/617 (13%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            L+NY+ +   KI    K L    +E       G L      +  R  G +P  +AE   
Sbjct: 82  LLRNYITQELSKISGVDKELIFPALEWGTTLEKGDLLIPVPRL--RIKGANPKDLAEQWA 139

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFV 128
           A       +  V   G  F+  + + S L K++ S  +  G ++G   +GKG KV +EF 
Sbjct: 140 AAFPKGGYLKDVIAQGP-FLQFFFNTSVLYKLVISDALERGDDFGALPLGKGQKVIVEFS 198

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P H GH R  ++G  +++L    G+EV R  Y+ D G Q   LA+       +A
Sbjct: 199 SPNIAKPFHAGHLRSTIIGGFISNLYEKLGHEVMRMNYLGDWGKQFGVLAVGFERYGDEA 258

Query: 189 LYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSSELLNFP--EEKWLP 231
               D   P  +   VY+K                 G+ L D+  +        +E  + 
Sbjct: 259 KLKTD---PINHLFEVYVKINQDIKAQSESTEEIAEGQSLDDQARAFFKKMENGDESAVS 315

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + K +   ++ K I D    LNI++D++  E    +     + +       +G + E   
Sbjct: 316 LWKRFRELSIEKYI-DTYARLNIKYDLYSGESQVPQ---EIMDEATKIFEEKGLLSE--- 368

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGF 349
                        D+   L   T     + + ++ K DG+  Y   D+     +Y +  F
Sbjct: 369 -------------DQGAKLIDLTKFNKKLGKAIVQKKDGTSLYLTRDVGAAIDRYRKYKF 415

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRL 391
           D MIYV+ S    +  +   +   +  + A+                    V L  ++  
Sbjct: 416 DKMIYVIASQQDLHTAQFFEILKRMDFEWAKNLTHINFGMVLGMSSRKGTVVFLDTILEE 475

Query: 392 YRDGMPIKMSKRAGDF---ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            ++ M   M K    +        V D VG  +V    +  K     +F + ++    + 
Sbjct: 476 TKEKMHDVMRKNDSKYQQIANPEEVADLVGISAVMIQDMQSKRINNYEFKWERMTSF-EG 534

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +   Y+QYA++R  SI R A       D DL            +     L+  LA+YP V
Sbjct: 535 DTGPYLQYAHSRLASITRNA-------DIDLAELPGADFGLLVEPQAEYLVRLLAQYPDV 587

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  +    EP  L  YL+ L       +        + +V    + L   RL L  +   
Sbjct: 588 LRTSLKNHEPSTLVTYLFKLTHQVSSCYD-------VLWVAGQEKPLATARLALYASARQ 640

Query: 569 IINSGLNIIGVESPNEM 585
           ++ +G+ ++G+     M
Sbjct: 641 VLYNGMLLLGLTPVERM 657


>gi|302763517|ref|XP_002965180.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii]
 gi|300167413|gb|EFJ34018.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii]
          Length = 578

 Score =  346 bits (889), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 121/620 (19%), Positives = 230/620 (37%), Gaps = 79/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLGL 59
           M  +    + +    +        E   ++ IVI    +   G    N AM + SR  G+
Sbjct: 1   MARYPSVRNEISQIFQAAFRSTVGEWVSVEPIVI-ACNNPKFGDYQINNAMGIWSRIKGM 59

Query: 60  -----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
                +P+++A+ ++  I     ++   +AG G+IN+ LS  ++ + L++++  G++   
Sbjct: 60  QSTYGNPVSVAQDVLRNIPRTSMLEKTSVAGAGYINVTLSARFIAEKLTTVLHQGVDALA 119

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             +       ++F S N    +HVGH R  V+GD++A ++ F    V R  ++ D G Q 
Sbjct: 120 PEL-PVKHALVDFSSPNIAKELHVGHLRSTVIGDSVAKMLEFCNVSVMRRNHVGDWGTQF 178

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             L   +F    +       DL + Y          ++   K    ++     +     K
Sbjct: 179 GMLLEHIFETGAEV--EAIGDLQKMYVEASERFKSDEQFKAKAQQGVVKLQRSEAEYHAK 236

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               +++  + R   +    + ++ + E       P  I   I +L  +G + E      
Sbjct: 237 ---WKSLCDVSRRAYERTYGRLNVSLEEKAESFYHPY-IPYAIKSLEEKGLLQES----- 287

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
                     D  +++F   + G D+   + K+DG+YTY + DLA    +      + +I
Sbjct: 288 ----------DGARVIF---LKGYDIPLIVTKTDGAYTYASTDLAALWYRVHVEKAEWII 334

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSK-------- 402
           YV       +       A                +   + L  DG  I+  K        
Sbjct: 335 YVTDVGQKQHFDMFFQAAKLAGWLPEHGFPKAQHIGFGMVLGEDGKRIRGRKGGVLLANL 394

Query: 403 ----------------RAGDF--ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                           R G++    L    + +G  +V++  L         FDF ++ +
Sbjct: 395 LDDAKSRSHKELIERGRKGEWSGEDLEAAAEALGYGAVKYADLKNNRETTYRFDFEQMLD 454

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             K N   Y+ YAYAR  SI R++     ++           +       E  L +HL +
Sbjct: 455 -IKGNTAVYLFYAYARVCSIIRKSGRSIDEI-------KQTCELVVEHPHERSLGLHLVQ 506

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   +E++     P  L  YLY L+ +F   ++  + N  L+            RL L  
Sbjct: 507 FTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCKVNGSLQ---------EASRLLLCE 557

Query: 565 AVASIINSGLNIIGVESPNE 584
           A   I+  GL ++G+     
Sbjct: 558 ATRLIMKQGLELLGLTPLER 577


>gi|284166430|ref|YP_003404709.1| arginyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016085|gb|ADB62036.1| arginyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 595

 Score =  346 bits (888), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 144/632 (22%), Positives = 254/632 (40%), Gaps = 86/632 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    + +++ L+    ++       D + IE P +     L+++ A  L+   G  P 
Sbjct: 1   MFLALRAEVEDALERALSELDFPT---DDLGIEEPPEDVDSVLASSVAFRLAGEAGAPPP 57

Query: 63  TIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  +   +  D    V  V   G  ++N   S +YL + L +      E    L  + 
Sbjct: 58  QVAGQLADELDADELTYVSEVQTQGP-YLNFLPSDAYLAETLETATA---ETYGALEDRD 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T V +E  SANPTGP+HVG  R  ++GD +A+L+ ++GY+V R YY+NDAG Q+     S
Sbjct: 114 TSVVVEHTSANPTGPVHVGRARNPIIGDAVANLLDYAGYDVDRHYYVNDAGRQMAVFTWS 173

Query: 181 VFWRYQQALYNNDS------DLPEGYYPGVYLKHVGKELADKYSSEL-------LNFPEE 227
                +  L +         DL   Y  G      G E   + +          L   ++
Sbjct: 174 YETFDEAELESEPERDRKEYDLVRYYRKGNAFLENGPEDEVEEAEAEIESIMQGLEAGDD 233

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +    V +  V  ++  + + L+ L  + D F+ E  F R       D++  L       
Sbjct: 234 EAYERVSEV-VDQVLGGMTECLERLPAEFDEFVKETRFMRN--GDTDDLVARLKE----- 285

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                        +   +           G D +   L+SDG+  Y   DLA+ + K++ 
Sbjct: 286 -----------LDEAVYEEDAWQLELEDHGIDKNLVFLRSDGTSLYATRDLAHHEWKFDE 334

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +D  + V+G DH    ++L      +      +  +L   V L       KMS R G  
Sbjct: 335 -YDRAVTVLGEDHKLQARQLRTTLELLGNDTDGLRQVLYSYVNLPEG----KMSTRRGTG 389

Query: 408 ITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSEL 434
           + L  ++DE                                 VG  +VR+ ++ ++ ++ 
Sbjct: 390 VDLDDLLDEAIDRAREEVEDRLDDRIRDDDLNEDDIERIAHQVGIGAVRYDIVSKQPTKA 449

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDT 493
           + F++ +  +   ++   YVQY +ARC  I  +A  D    L         +  +     
Sbjct: 450 ITFEWDQALDFEAQS-APYVQYVHARCCGILEEAGLDPETALAAQDVELEALEADLLETD 508

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +E  L+  +A +P V++ A    EP+++A Y  + A  F+  +   RE P L      + 
Sbjct: 509 AEHDLLETIARFPAVVDEAADDLEPHQIATYTREFADRFNAFY---RECPVLS--DDVDP 563

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   RL LV A    + + L+I+GVE+P  M
Sbjct: 564 DVREARLALVAASKHTVANALSILGVEAPRSM 595


>gi|288929012|ref|ZP_06422858.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329996|gb|EFC68581.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 605

 Score =  346 bits (888), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 127/647 (19%), Positives = 245/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + ++  + +   +KE       +      + +++ +    G+L T       +   L 
Sbjct: 1   MNIESEIIATVVQAVKECFG----QDVPTTMVQLQKTKAEFEGNL-TLVVFPFLKLSRLK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ +   +     V   F   KGF+NL ++P+    +L+ I        + +  + 
Sbjct: 56  PEDTAQQLGDYLAKHCKVVQSFNVVKGFLNLTIAPAAWISLLNRIDSEPRFGEKAVNEQS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G +LA +M  +G  V +   +ND G  I    L+
Sbjct: 116 PLVMVEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNRVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELAD----------------KYSSE 220
            + ++        +     +  G Y     +H   ELA+                K + E
Sbjct: 176 -WKKWGNGATPESTGKKGDHLIGDYYVAFDQHYRAELAELTAKFRAEGMAAEEAEKRAKE 234

Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +V+    D  V+A+ K +         +  KA+ +  D    E + +  
Sbjct: 235 DSPLMKEAHDMLVRWEQGDEEVRALWKKMNDWVYQGFDETYKAMGVGFDKIYYESETYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + + +        G   E     P              +    +  G D  + LL++D
Sbjct: 295 GKAKVEE--------GLAKELFFRKP-----------DGSVWADLSDEGLD-QKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTAALRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPNG---KMKSREGTVVDADELMEEMVSAARRTSEELGKFADMTENERNEIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A+     L   
Sbjct: 452 MGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKAEAEGIVL--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +V+P     +  E+QLI  L  +  V+E A     P  +A Y Y+L   F+  +  
Sbjct: 508 ---PSVLPDTLPLNEKEVQLIQKLNSFETVVEQAGKDYSPSGIANYCYELTKDFNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A + +   +RL L   VA  I +G+ ++G+E P  M
Sbjct: 565 ------YSILNAESAEAKTLRLALAKNVAKTIKNGMQLLGIEVPERM 605


>gi|260173135|ref|ZP_05759547.1| arginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315921410|ref|ZP_07917650.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695285|gb|EFS32120.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 605

 Score =  346 bits (888), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 126/647 (19%), Positives = 253/647 (39%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + N LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVLNGLKAL-YGQEVPEKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I          +    
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLVQVTDAS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K++++ ++  E       
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDEAKAKAES 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PEQIPTGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 565 ------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 605


>gi|288871500|ref|ZP_06117831.2| arginine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288863223|gb|EFC95521.1| arginine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 607

 Score =  346 bits (888), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 119/635 (18%), Positives = 235/635 (37%), Gaps = 99/635 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  + + +KE       ++      +  RP  C       N AM  ++     P+ 
Sbjct: 19  MKKILDLITSEVKEAFAACGYDESFAKVTLSNRPDLCE---YQCNGAMAAAKAYKKKPID 75

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V ++        V     GFIN+ L   YL   ++++       G         +
Sbjct: 76  IANEVVEKLSGGDIFSEVNAVMPGFINIKLEAGYLATYMNNMREEDQC-GCEKAKTPLTI 134

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 135 IVDYGGANVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIIEELRD 194

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  +  Y +++      Y G Y K     + +          + K        + +A +K
Sbjct: 195 RKPELAYFDET------YTGEYPKEAPFTIGELEEIYPAASAKSKTDEEFSARAHEATLK 248

Query: 244 II---------------------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +                      + +   LN+  D++  E D     P  I++    L  
Sbjct: 249 LQNGYAPYRAIWNHIIDVSVTDLKKNYGNLNVSFDLWKGESDAQAYIPGLIQE----LEE 304

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLA 339
           +   YE                 +  L+      GD  + P   + KSDG+  Y  +DL 
Sbjct: 305 KKLAYES----------------QGALVVDIAEPGDSKELPPCIIRKSDGAALYSTSDLG 348

Query: 340 YFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGM 396
               + E+ F  D  IY+       +  ++  VA        +  +  L       +DG 
Sbjct: 349 TILER-EKEFCPDWYIYITDKRQELHFTQVFRVAKKAGFVPEERKMSHLGFGTMNGKDGK 407

Query: 397 PIKMSKRAGDFITLRHVVDE--------------------------VGSDSVRFMMLWRK 430
           P K   R G  + L  ++ +                          VG  ++++  L  +
Sbjct: 408 PFK--TRDGGVMRLETLISDIDAAAYEKIMENRTVSEEEALKTSKIVGMAALKYGDLSNQ 465

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            S+   FD  +     + N   Y+ Y   R +SI  +A D+       +   +++P    
Sbjct: 466 ASKDYIFDMDRFVSF-EGNTGPYILYTIVRIKSILAKASDLEVQ---GVCTGDILPA--- 518

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
              +E  L++ L++Y  VIE + +   P+K+  Y+Y+LA+ F+  +         + +  
Sbjct: 519 VSGAEKDLMLQLSKYNEVIETSFMELAPHKICQYVYELANAFNRFYHD------TKIIAE 572

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N K     L L+     ++ + ++++G+E+P  M
Sbjct: 573 ENEKQRASWLSLISLAKDVLTACIDLLGIEAPERM 607


>gi|260593384|ref|ZP_05858842.1| arginine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534660|gb|EEX17277.1| arginine--tRNA ligase [Prevotella veroralis F0319]
          Length = 606

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 128/648 (19%), Positives = 253/648 (39%), Gaps = 105/648 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  ++  +  +KE+   ++V +K+   I +++ R    G+L T     L +     
Sbjct: 1   MKIEAQITAAARAAVKEL-YGVEVPEKM---IQLQKTRSDFEGNL-TLVTFPLLKTSHKK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +    +L+ I  +     +++    
Sbjct: 56  PEDTAQEIGEYLKKNCKAIADFNVVKGFLNLVIAQAAWVGLLNDINANEKFGEKSVTENS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL-------KHVGKELADKYSSELLNFPE-----EK 228
            + ++   +    +     +  G +        K   K+L ++Y  E +   +     E+
Sbjct: 176 -WLKWGNGITPEKAGKKGDHLIGDFYVLFDKHFKEECKQLQEQYEKEGMTPDDAKAKAEQ 234

Query: 229 WLPIVK------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
             P++K            D  V+A+ + +         +  KAL +  D    E + +  
Sbjct: 235 EAPLIKEAHEMLVKWEHNDPEVRALWEKMNSWVYAGFDETYKALGVGFDKIYYESNTYLV 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +     +G                    +   +    T  G D  + LL+ D
Sbjct: 295 GKKKVEEGL----AKGLF---------------IRKEDNSVWADLTDEGLD-QKLLLRKD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTAEMRFNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVV------------------------------DEV 417
            +    +G   KM  R G  +    +V                                V
Sbjct: 395 GMVELPNG---KMKSREGTVVDADDLVASMIENAKTLSEDKVNKLEGITEDEKNEIARIV 451

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A+     L  
Sbjct: 452 GMGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAQSIALPA 510

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L        ++  +  E+ LI  L ++   +  A I   P  +A Y Y+L   F+  + 
Sbjct: 511 SL------TDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANYCYELTKEFNQFYH 564

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 565 D------YSILNADTEAEKITRLVLAKNVAKVIKNGMALLGIEVPERM 606


>gi|327312637|ref|YP_004328074.1| arginine--tRNA ligase [Prevotella denticola F0289]
 gi|326946176|gb|AEA22061.1| arginine--tRNA ligase [Prevotella denticola F0289]
          Length = 606

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 120/642 (18%), Positives = 240/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++         ++   +     I +++ R    G+L T     L +     P   A+
Sbjct: 3   IEEQITGAALAAVKELYGTEVPEKMIQLQKTRSDFEGNL-TLVIFPLLKISHKKPEETAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K +    + F   KGF+NL ++ +    +L+ I        + +      V IE
Sbjct: 62  ELGEYLKKNCKAVADFNVVKGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WLKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL-------KHVGKELADKYSSELL-----NFPEEKWLPIVK 234
             +    +     +  G +        K   ++L ++Y  E +         E+  P++K
Sbjct: 181 NGITPEKAGKKGDHLIGDFYVLFDKHFKEECRQLQEQYEKEGMAPDAAKEKAEQEAPLIK 240

Query: 235 ------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       D  V A+ + +         +  KAL +  D    E + +      + 
Sbjct: 241 EAHEMLVKWEQGDSEVHALWEKMNSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +     +G  +                 D   +    T  G D  + LL+ DG+  Y 
Sbjct: 301 EGL----EKGLFFRK---------------DDNSVWADLTKEGLD-QKLLLRKDGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +    
Sbjct: 341 TQDIGTAEMRFNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVV------------------------------DEVGSDSVR 423
           +G   KM  R G  +    +V                                VG  +++
Sbjct: 401 NG---KMKSREGTVVDADDLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A         D+    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAAAQ------DILLPA 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  ++  +  E++LI  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 511 SLADDAPLNEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILSADTEAKKITRLVLARNVAKVIRNGMALLGIEVPERM 606


>gi|320538434|ref|ZP_08038301.1| arginyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320144696|gb|EFW36445.1| arginyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 594

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 119/629 (18%), Positives = 241/629 (38%), Gaps = 82/629 (13%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLG 58
            + +D   + ++ + E    +  E       D+I +E P +   G +        ++ L 
Sbjct: 3   NVMSDIREQWRSIVAEAVSSLLPEGSAPLQSDQITMEVPPNPEMGDVGFPL-FPFAKLLR 61

Query: 59  LDPLTIAELIVARIKIDPDVDS---VFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGR 114
             P  IA  + A ++ +P +     V I G  +IN++L       K L +++  G  YG+
Sbjct: 62  AAPAKIAADVHALLQKNPALKDMGTVKIIGP-YINVFLPKDKIAEKTLRAVIEQGKNYGK 120

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
               KG K+ +EF S N   P+H+GH R   +G++++ +  F G +V +   IND G  I
Sbjct: 121 TESLKGKKIMVEFSSPNTNKPLHLGHLRNDAIGESISRIFEFCGADVYKVNIINDRGVHI 180

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH-----VGKELADKYSSELLNFPEE-- 227
               L+           +    P+ +   +Y++         E A++ + ELL   E   
Sbjct: 181 CKSMLAYMKFADGKTPESLGIKPDRFVGEMYVRFNTYSKENPEKAEQEAQELLRSWEAGD 240

Query: 228 --KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
             + L + +  +  A+   I+   +   +  D    E + +        ++++ LA +G 
Sbjct: 241 KPEVLELWRKMNDWAIQ-GIKQTYERTGVSFDKLYFESETYLKGR---EEVLEGLA-KGL 295

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
            Y+                +   +    + +  D  + LL+ DG+  Y   D      ++
Sbjct: 296 FYK---------------EEDGSIWVDLSPIKLDK-KVLLRGDGTALYITQDFGTAIFRH 339

Query: 346 -ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKR 403
            +  FD +IYV+G++   + K L  V   +    A+ +  L   +V L       KM  R
Sbjct: 340 NDWPFDRLIYVVGNEQEYHFKVLFYVLGLLGYDWAKNLYHLSYGMVNLPEG----KMKSR 395

Query: 404 AGDFITLRHVV---------------------------DEVGSDSVRFMMLWRKNSELLD 436
            G  +    ++                           +++   ++ + +L     + + 
Sbjct: 396 EGTIVDADDLINSLRDAALAEIEQKGRSEAVGDPKEVAEKIALAALHYFLLQVSPKKDML 455

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F+  +       N   Y+QY  AR  SI ++A+    +          +        SE 
Sbjct: 456 FNPQESLSF-NGNTGPYLQYMGARITSILKKAE---TEEGKQSISGGSVKPALLTHESEW 511

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  + ++P+ +  A    +   +  YLY+L+  F   +           + A N  L 
Sbjct: 512 TLLKTIEDFPQQVSRAADQYDSSIVTAYLYELSKNFSRFYHDC------PILSAGNADLA 565

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + RL+L  AV  ++ + + ++ V     M
Sbjct: 566 VTRLELARAVKIVLENAVRLVLVPFLEVM 594


>gi|282881138|ref|ZP_06289825.1| arginine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304942|gb|EFA97015.1| arginine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 606

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 126/642 (19%), Positives = 240/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ + +     ++  ++  +  + +++ +    G+L T       +     P   A+
Sbjct: 3   IENQIASSVIASVKELYGQEVPMSMVQLQKTKSNFEGNL-TLVVFPFLKISKQKPEDTAK 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  D    + F   KGF+NL ++      +L+ I        + +      V IE
Sbjct: 62  AIGELLVRDCPAVASFNVVKGFLNLNIAKEAWVDLLNDIHADEKFGEKPVTEDSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----------------KHVGKELADKYSSELLNFPE---- 226
                  S     +  G Y                 K++  E  D+ ++E     E    
Sbjct: 181 NGETPESSGKKGDHLIGDYYVAFDKHYRAELAALKSKYMADEGLDEETAENKAKEESALM 240

Query: 227 -EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPI 273
            E    +VK    D  V+ + K +         +  KAL +  D    E + +    + +
Sbjct: 241 KEARAMLVKWEQGDKEVRTLWKKMNSWVYAGFDETYKALGVGFDKIYYESETYLEGKAKV 300

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D ++     G  +                 D   +    T  G D  + LL+SDG+  Y
Sbjct: 301 EDGLNR----GLFFRK---------------DDNSVWADLTKEGLD-QKLLLRSDGTSVY 340

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+   + +++    D MIYV+G++ + + + L  +   +  K  +  V     +   
Sbjct: 341 MTQDIGTAEMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGMVEL 400

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            +G   KM  R G  +    ++ E                             VG  +++
Sbjct: 401 PNG---KMKSREGTVVDADELITEMIADARKTSDELGKFDDMSEQEKQDIARIVGLGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A      L   L    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKADAEGIKLPQQLSTS- 515

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                +  +  E+ LI  L +Y  V+E A     P  +A Y Y+L   F+  +       
Sbjct: 516 -----APMNDKEIALIQKLNDYRAVVEQAGTDYSPSGIANYCYELTKDFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + AN+ +    RL L   VA  I + + ++G+E P  M
Sbjct: 566 -YSILNANSEEEKTARLVLAANVAKTIKNAMQLLGIEVPERM 606


>gi|323948238|gb|EGB44226.1| arginyl-tRNA synthetase [Escherichia coli H120]
          Length = 462

 Score =  346 bits (887), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 110/494 (22%), Positives = 194/494 (39%), Gaps = 64/494 (12%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   +  
Sbjct: 1   MVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEK 60

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           + Q+     +    EG+Y            A K+  E   F E     +VK  S     +
Sbjct: 61  QQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDEYFR 110

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +   L  + +  +       + R + +  RD +   +    +  GI+   K+K     +
Sbjct: 111 EMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA-VE 165

Query: 304 MDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
            +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y + S 
Sbjct: 166 SEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSR 225

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
              ++ +  A+          + +      + L +DG P K   RAG  + L  ++DE  
Sbjct: 226 QHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLDEAL 283

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  +V++  L +  +    FD+  +    + N  
Sbjct: 284 ERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTA 342

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+QYAY R  S+FR+A+      +  L    VI +E      E QL   L ++   +  
Sbjct: 343 PYMQYAYTRVLSVFRKAEIN----EEQLAAAPVIIRE----DREAQLAARLLQFEETLTV 394

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P+ +  YLYDLA +F G + H         + A N ++   RL+L    A  + 
Sbjct: 395 VAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAENEEVRNSRLKLAQLTAKTLK 448

Query: 572 SGLNIIGVESPNEM 585
            GL+ +G+E+   M
Sbjct: 449 LGLDTLGIETVERM 462


>gi|212692316|ref|ZP_03300444.1| hypothetical protein BACDOR_01812 [Bacteroides dorei DSM 17855]
 gi|237711416|ref|ZP_04541897.1| arginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237726123|ref|ZP_04556604.1| arginyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265752822|ref|ZP_06088391.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212665193|gb|EEB25765.1| hypothetical protein BACDOR_01812 [Bacteroides dorei DSM 17855]
 gi|229435931|gb|EEO46008.1| arginyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229454111|gb|EEO59832.1| arginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263236008|gb|EEZ21503.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 606

 Score =  345 bits (886), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 128/648 (19%), Positives = 248/648 (38%), Gaps = 105/648 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ + + +K +     V  K+   + +++ +    GHL T       +     
Sbjct: 1   MNIEEKLTTSIISAIKTL-YGQDVPGKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKA 55

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P   A+ I   +K   P++ S + A KGF+NL ++     ++L+SI  +           
Sbjct: 56  PEQTAQEIGGYLKEHAPELVSAYNAVKGFLNLTIASDCWIELLNSIQAAPEYGIEKATEN 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G+ LA++MA +G +V +   +ND G  I    L
Sbjct: 116 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSML 175

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN--------- 223
           + + +Y        S     +  G Y        K   KEL  +Y +E LN         
Sbjct: 176 A-WLKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAE 234

Query: 224 ------FPEEKWLPIVK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHR 267
                     + L   +  D  ++A+ + +         +  K + +  D    E + + 
Sbjct: 235 ANSPLMLEAREMLRKWEANDPEIRALWRKMNDWVYAGFDETYKMMGVSFDKIYYESNTYL 294

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                 ++ +     +G+ Y                 +   +    T  G D  + LL+ 
Sbjct: 295 EG----KEKVMEGLEKGFFYRK---------------EDNSVWADLTAEGLD-HKLLLRG 334

Query: 328 DGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V   
Sbjct: 335 DGTSVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFS 394

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             +    +G   KM  R G  +    +++                              V
Sbjct: 395 YGMVELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIV 451

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +  
Sbjct: 452 GLGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARVQSVLRKAAEAGIVI-- 508

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                 +IP   E    E  LI  LA++  V++ A     P  +A Y YDL   ++  + 
Sbjct: 509 ----PEIIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYH 564

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     ++  N  L + RL L   V  I+ + + ++G+E P  M
Sbjct: 565 D------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606


>gi|222445526|ref|ZP_03608041.1| hypothetical protein METSMIALI_01166 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435091|gb|EEE42256.1| hypothetical protein METSMIALI_01166 [Methanobrevibacter smithii
           DSM 2375]
          Length = 575

 Score =  345 bits (886), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 142/624 (22%), Positives = 266/624 (42%), Gaps = 90/624 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-------RIVIERPRDCAHGHLSTNAAMILSR 55
           ++ +   +  + + +   K +V+  + +          +E P +   G L++  A  L++
Sbjct: 1   MYFEIEKQAIDAISDALDKFEVDDTLENFQVEDEKNFRLEFPPNPDMGDLASTIAFSLAK 60

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            L   P  IA  IV +++I    + V   G  ++N ++  S   K L   V  G +YG  
Sbjct: 61  KLRKAPNLIASEIVEKLEIPEIFEKVEAIGP-YVNFFIDYSNFSKKLLEYV--GKDYG-Q 116

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           L     K+ +E  SANP GP+H+GH R ++ GD+L  L+  +G EV  +YY+ND G QI 
Sbjct: 117 LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRLLKVAGREVETQYYVNDMGRQIA 176

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----YSSELLNFPE---EK 228
            +   +     + + + + D  +     +Y K   K   D+    +   L+   E   E 
Sbjct: 177 IIVFGITELGLK-IEDQEGDKIDHKIGRLYFKANQKLNEDESLVSHVDNLIERYEGGAEP 235

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L  + +  V++ +  I++ L  +NI HD F+ E  F R     + D+I     +G+V  
Sbjct: 236 ELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQFVR--SGEVDDMIKYFDHEGFVSY 293

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G +                      T    + +  L +SDG+  Y   DLAY + K  +G
Sbjct: 294 GDV-----------------TYIDLTCFQIEKEFVLRRSDGTSLYSTRDLAYHRYKATQG 336

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D ++ ++GSDH    +++  +   +  ++    V+  E + L        MS R G F+
Sbjct: 337 -DVVLDILGSDHKLAAQQINVIFKEI-LREIPPEVIFYEFITLPSG----SMSTRKGVFV 390

Query: 409 TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
           ++  +VDE                           +G  ++RF +      + L F + +
Sbjct: 391 SVDELVDEAVKRAADEIKSRNPDLTDEEIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDE 450

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                +      +QYA+AR   + +++      L         +  +   + +E  LI  
Sbjct: 451 ALSFERG--CASIQYAHARACKLLKKSGKDVSSL--------AVSDDWVPNENEKDLIRT 500

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +A++P+VIE+    +  + +  Y  DLAS F+  +   +       V  ++ + T  RL 
Sbjct: 501 IAKFPQVIEDCANKKRIHNITQYCQDLASAFNKFYKAEQ-------VIGSDVEDT--RLV 551

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV    + + + L+I+GV +P +M
Sbjct: 552 LVDRAKTTLKNALDILGVPAPQKM 575


>gi|325268661|ref|ZP_08135291.1| arginine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989189|gb|EGC21142.1| arginine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 606

 Score =  345 bits (886), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 120/642 (18%), Positives = 241/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++ +       ++   +     I +++ R    G+L T     L +     P   A+
Sbjct: 3   IEEQITSAALAAVKELYGTEVPEKMIQLQKTRSDFEGNL-TLVTFPLLKTSHRKPEETAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K +    + F   KGF+NL ++ +    +L+ I        + +      V IE
Sbjct: 62  ELGEYLKKNCKAVADFNVVKGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WLKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL-------KHVGKELADKYSSELLNFPEEKWL-----PIVK 234
             +    +     +  G +        K   ++L ++Y  E +     K       P++K
Sbjct: 181 NGITPEKAGKKGDHLIGDFYVLFDKHFKEECRQLQEQYEKEGMTPDAAKEKAGQEAPLIK 240

Query: 235 ------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       D  V+A+ + +         +  KAL +  D    E + +      + 
Sbjct: 241 EAHEMLVKWEQGDPEVRALWEKMNSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +     +G  +                 D   +    T  G D  + LL+ DG+  Y 
Sbjct: 301 EGL----EKGLFFRK---------------DDNSVWADLTKEGLD-QKLLLRKDGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +    
Sbjct: 341 TQDIGTAEMRFNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVV------------------------------DEVGSDSVR 423
           +G   KM  R G  +    +V                                VG  +++
Sbjct: 401 NG---KMKSREGTVVDADDLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A         D+    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAAAQ------DILLPA 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  ++  +  E++LI  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 511 SLADDAPLNEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL L   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILSADTEAEKITRLVLAKNVAKVIRNGMALLGIEVPERM 606


>gi|15618481|ref|NP_224766.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836101|ref|NP_300625.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752468|ref|NP_444730.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241923|ref|NP_876864.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|7674357|sp|Q9Z7Y3|SYR_CHLPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|4376863|gb|AAD18710.1| Arginyl tRNA Transferase [Chlamydophila pneumoniae CWL029]
 gi|7189110|gb|AAF38053.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978941|dbj|BAA98776.1| arginyl tRNA transferase [Chlamydophila pneumoniae J138]
 gi|33236433|gb|AAP98521.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 561

 Score =  345 bits (886), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 126/579 (21%), Positives = 225/579 (38%), Gaps = 76/579 (13%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I        GH   N AM L+R L   P  IAE IVA +  +P    + IAG GFIN   
Sbjct: 30  ITPSTKEHFGHYQCNDAMKLARVLKKAPRAIAEAIVAELPQEP-FSLIEIAGAGFINFTF 88

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP +L + L       ++ G   + +  K+ I+F S N    MHVGH R  ++GD+LA +
Sbjct: 89  SPVFLNQQL-EHFKDALKLGFQ-VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARI 146

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
            ++ G++V R  +I D G     L   +    +     +D +     Y   Y+     E 
Sbjct: 147 FSYVGHDVLRLNHIGDWGTAFGMLITYLQ---ENPCDYSDLEDLTSLYKKAYVCFTNDEE 203

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K S + +   + K    +  +  + + +      + +    DI + +      +P  +
Sbjct: 204 FKKRSQQNVVALQAKDPQAIAIW--EKICETSEKAFQKIYDILDIVVEKRGESFYNP-FL 260

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +II++L ++G +                  +  + +F        +   + KSDG Y Y
Sbjct: 261 PEIIEDLEKKGLL---------------TVSNDAKCVF---HEAFSIPFMVQKSDGGYNY 302

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              DLA  + + E    D +I V     S + + LEA A A    +  I   +   + L 
Sbjct: 303 ATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAGYLQPGIFSHVGFGLVLD 362

Query: 393 RDGMPIKMSKRAGDFITLRHVVD---------------------------EVGSDSVRFM 425
             G   K+  R+G+ + LR ++D                            +G +++++ 
Sbjct: 363 PQGK--KLKTRSGENVKLRELLDTAIEKAEEALREHRPELTDEAIQERAPVIGINAIKYS 420

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L    +    F F K+  + + N   ++ YAY R + I R+       L  +  P    
Sbjct: 421 DLSSHRTSDYVFSFEKML-RFEGNTAMFLLYAYVRIQGIKRRLG--ISQLSLEGPPEIQE 477

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           P E     + L        +P  +E+      P+ L  YLY+L   F+G +         
Sbjct: 478 PAEELLALTLL-------RFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDSHI---- 526

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                 +      RL L      ++ +G++++G+++   
Sbjct: 527 -----QDSPYAKSRLFLCALAEQVLATGMHLLGLKTLER 560


>gi|300709761|ref|YP_003735575.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123444|gb|ADJ13783.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 582

 Score =  345 bits (886), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 139/631 (22%), Positives = 249/631 (39%), Gaps = 97/631 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    +     L E    + +  + L    +E P +     L+++ A  L+  +G  P 
Sbjct: 1   MFRSLRAEAAEVLTEALSALSLPTEDLG---LEEPPEDVEAVLASSVAFRLAGEVGTSPH 57

Query: 63  TIAELIVAR--IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  +     +     +  V   G  ++N + S +Y    L +      +YGR     G
Sbjct: 58  EVAGDLADATDVAGCEYLGGVGTQGP-YVNFHASDAYYADTLET--AREADYGRLEPT-G 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +E  SANPTGP+HVG  R  ++GD +A L+ F+G  V R YY+NDAG Q+     +
Sbjct: 114 REVVVEHTSANPTGPVHVGRARNPIIGDAIARLLDFAGNNVDRHYYVNDAGRQMAVFTWA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-------------LLNFPEE 227
                +  L + D +  +      Y K                          L N  EE
Sbjct: 174 YETFEEDDLPDPDREKADYELVRYYRKGNAFLEEADEGEVEAAEAEIQSIMQGLENGDEE 233

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +  +   + V  ++  +R+ L  L  + D F+ E  F R     + +++  L       
Sbjct: 234 AYERV--GHVVDTVLGGMRESLSRLPAEFDAFVKETRFIR--DGSVEELVKRLRE----- 284

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
             +      +   + D+              + +   L+SDG+  Y   DLA+ + K++ 
Sbjct: 285 --LDEAVYEEEAWQLDLPD-----------FEKNLVFLRSDGTSLYTTRDLAHHEWKFDE 331

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +D+ + V+G DH     +L A    +     +++ +    V L       KMS RAG  
Sbjct: 332 -YDHAVTVLGEDHKLQATQLGAALDLLGNDTDRLDSVFYSYVNLPEG----KMSTRAGTG 386

Query: 408 ITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSEL 434
           + L  ++DE                                 VG  +VR+ ++ ++ S+ 
Sbjct: 387 VDLDDLLDEAVARARDEVETRMDDRIRDDDLTESDIERIARQVGIGAVRYDIVSKQPSKA 446

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F++ +      ++   YVQY +AR   I  +A     D          I         
Sbjct: 447 ITFEWDRALNFEAQS-APYVQYVHARTCGILTEAARAGHD-------PGRIDPALLDSPE 498

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L+  +  +P VIE+A   ++P+++A Y  + A  F+  +       R R V + +  
Sbjct: 499 ERDLLEVIGRFPAVIESAATDRQPHQVATYTREFAETFNAFY-------RERQVISADED 551

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LT  RL LV      I + L+++G+E+P  M
Sbjct: 552 LTEARLALVAGARHTIANALSVLGIEAPESM 582


>gi|150003650|ref|YP_001298394.1| arginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254881121|ref|ZP_05253831.1| arginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319640128|ref|ZP_07994855.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166232757|sp|A6KZA8|SYR_BACV8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149932074|gb|ABR38772.1| arginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254833914|gb|EET14223.1| arginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317388406|gb|EFV69258.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 606

 Score =  345 bits (886), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 129/648 (19%), Positives = 248/648 (38%), Gaps = 105/648 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ + + +K +     V  K+   + +++ +    GHL T       +     
Sbjct: 1   MNIEEKLTTSIISAIKTL-YGQDVPGKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P   A+ I   +K   P++ S + A KGF+NL ++     ++L+SI  +           
Sbjct: 56  PEQTAQEIGGYLKEHAPELVSAYNAVKGFLNLTIASDCWIELLNSIQAAPEYGIEKATEN 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G+ LA++MA +G +V +   +ND G  I    L
Sbjct: 116 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSML 175

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN--------- 223
           + + +Y        S     +  G Y        K   KEL  +Y +E LN         
Sbjct: 176 A-WLKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAE 234

Query: 224 ------FPEEKWLPIVK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHR 267
                     + L   +  D  ++A+ K +         +  K + +  D    E + + 
Sbjct: 235 ANSPLMLEAREMLRKWEANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESNTYL 294

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                 ++ +     +G+ Y                 +   +    T  G D  + LL+ 
Sbjct: 295 EG----KEKVMEGLEKGFFYRK---------------EDNSVWADLTAEGLD-HKLLLRG 334

Query: 328 DGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V   
Sbjct: 335 DGTSVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFS 394

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             +    +G   KM  R G  +    +++                              V
Sbjct: 395 YGMVELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIV 451

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +  
Sbjct: 452 GLGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVI-- 508

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                 +IP   E    E  LI  LA++  V++ A     P  +A Y YDL   ++  + 
Sbjct: 509 ----PEIIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYH 564

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     ++  N  L + RL L   V  I+ + + ++G+E P  M
Sbjct: 565 D------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606


>gi|153805808|ref|ZP_01958476.1| hypothetical protein BACCAC_00045 [Bacteroides caccae ATCC 43185]
 gi|149130485|gb|EDM21691.1| hypothetical protein BACCAC_00045 [Bacteroides caccae ATCC 43185]
          Length = 605

 Score =  345 bits (886), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 120/647 (18%), Positives = 240/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +  +   EK     + I++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKALYSQEVPEK----MVQIQKTKKEFEGHL-TLVVFPFLKMSRKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K++    + F   KGF+NL ++ +    +L+ I               
Sbjct: 56  PEQTAQEIGEYLKVNEPAVAAFNVIKGFLNLTIASATWIDLLNEIQADEQYGLVKATETS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--------------- 225
            + +Y        S     +  G Y     K    +    +  F                
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMTEFAAQGMSEDEAKAKAEA 234

Query: 226 -----EEKWLPIVKDYS-------VQAMMK-----IIRDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK  +       +  MM         +  + + +  D    E + +  
Sbjct: 235 ASPLMQEAREMLVKWEAGDPEIRGLWEMMNNWVYAGFDETYRKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ ++                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   D MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVV--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PGQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G++++G+E P+ M
Sbjct: 565 ------FSILREENEAVKVFRIALSANVAKVVRLGMSLLGIEVPSRM 605


>gi|294777538|ref|ZP_06742989.1| arginine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294448606|gb|EFG17155.1| arginine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 606

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 128/648 (19%), Positives = 247/648 (38%), Gaps = 105/648 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ + + +K +     V  K+   + +++ +    GHL T       +     
Sbjct: 1   MNIEEKLTTSIISAIKTL-YGQDVPGKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P   A+ I   +K   P++ S + A KGF+NL ++     ++L+SI  +           
Sbjct: 56  PEQTAQEIGGYLKEHAPELVSAYNAVKGFLNLTIASDCWIELLNSIQAAPEYGIEKATEN 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G+ LA++M  +G +V +   +ND G  I    L
Sbjct: 116 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANVMTANGNKVVKTNIVNDRGIHICKSML 175

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLN--------- 223
           + + +Y        S     +  G Y        K   KEL  +Y +E LN         
Sbjct: 176 A-WLKYGNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAE 234

Query: 224 ------FPEEKWLPIVK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHR 267
                     + L   +  D  ++A+ K +         +  K + +  D    E + + 
Sbjct: 235 ANSPLMLEAREMLRKWEANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESNTYL 294

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                 ++ +     +G+ Y                 +   +    T  G D  + LL+ 
Sbjct: 295 EG----KEKVMEGLEKGFFYRK---------------EDNSVWADLTAEGLD-HKLLLRG 334

Query: 328 DGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V   
Sbjct: 335 DGTSVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFS 394

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             +    +G   KM  R G  +    +++                              V
Sbjct: 395 YGMVELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIV 451

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +  
Sbjct: 452 GLGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVI-- 508

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                 +IP   E    E  LI  LA++  V++ A     P  +A Y YDL   ++  + 
Sbjct: 509 ----PEIIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYH 564

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     ++  N  L + RL L   V  I+ + + ++G+E P  M
Sbjct: 565 D------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606


>gi|317504598|ref|ZP_07962568.1| arginine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664292|gb|EFV03989.1| arginine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 605

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 121/647 (18%), Positives = 242/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + +  +  ++  +      + +++ R    G+L T       +    +
Sbjct: 1   MNI----ENAISSSVLLVVKELYGQDVPATMVQLQKTRSNFEGNL-TLVVFPFLKLSKKN 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +       S F   KGF+NL +       +L+ I        + +    
Sbjct: 56  PEQTAQEIGEALVKKCSAVSSFNVVKGFLNLVVGKDAWLSLLNDINADEKFGEKKVSDDS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +GY+V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMQANGYKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFP-------- 225
            + ++   +    +     +  G +        +   ++L  +Y  E L+          
Sbjct: 176 -WLKWGNGITPEQAGKKGDHLIGDFYVAFDKHYRAECEQLKAQYMQEGLSEEAATEKAKA 234

Query: 226 -----EEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+A+ + +         +  K L +  D    E + +  
Sbjct: 235 EAPLIKEAHAMLVKWEQGDKEVRALWEKMNNWVYAGFDETYKTLGVGFDKIYYESETYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +     +G  +                 +   +    T  G D  + LL+SD
Sbjct: 295 GKKKVEEGL----AKGLFFRK---------------EDNSVWADLTNEGLD-QKLLLRSD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTADMRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKALVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------------DEVG 418
            +    +G   KM  R G  +    +V                               VG
Sbjct: 395 GMVELPNG---KMKSREGTVVDADDLVAAMIDDARKTSDELGKFKDMTEEEKQNVARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A+     L   
Sbjct: 452 LGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAENIPL--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 +  ++  +  E+QLI  L ++   +E A     P  +A Y Y+L   F+  +  
Sbjct: 508 ---PETLSTDAPLNEKEIQLIQKLNDFGAAVEQAGKDYSPSGIANYCYELTKDFNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A++    + RL L   VA +I +G+ ++G+E P  M
Sbjct: 565 ------YSILNADSNGEKITRLVLAKNVAKVIKNGMELLGIEVPERM 605


>gi|154149818|ref|YP_001403436.1| arginyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166232801|sp|A7I4Y2|SYR_METB6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|153998370|gb|ABS54793.1| arginyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 558

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 154/622 (24%), Positives = 259/622 (41%), Gaps = 103/622 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  D ++ +K  L E  C    E  ++D           H  L+T  A  L++     P+
Sbjct: 1   MVVDTTAAIKRALSE--CTGLAEIPLVDG--------GEHADLATTVAFALAKTKKQAPV 50

Query: 63  TIAELIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IA+ +VA +K + ++      V   G  +IN     +Y+   L + V  G  YG     
Sbjct: 51  KIAQDVVAALKNNRELSDLGVTVEAKGP-YINFVFGSAYVTAALKAAVQPG--YGSFPAK 107

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  ++ +E  SANP GP+HVGH R +++GD+LA     +GY +  EYY+ND G QI    
Sbjct: 108 ESPRIVLEHTSANPNGPLHVGHIRNSIIGDSLARAFRKAGYPLEVEYYVNDMGRQIAI-- 165

Query: 179 LSVFWRYQQALYNN-DSDLPEGYYPGVYLKHVGKELAD----KYSSELLNFPEEKWLPIV 233
             V W +    +   +S+  + +   VY+    +   D    K   +L+   E      V
Sbjct: 166 --VTWGFDHLEHGQHESEKEDAHIARVYIAANREIEKDPGITKQVDKLMELVESGDPETV 223

Query: 234 KDYSVQ--AMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGI 290
           K +  +    +      LK LN++HD F+ E DF + GD   +   I+NL +    +EG 
Sbjct: 224 KKFRREVSRCLDGFAVTLKNLNVKHDRFVWESDFVKNGDTKAVIAKIENLPQA--THEGT 281

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L                 L       G      + +SDG+  Y A DLA+   K +  FD
Sbjct: 282 L-----------------LALDLAEFGFTNKYVMRRSDGTSVYAARDLAFHTWKNQ-NFD 323

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
             I V+G+DH     +L+     + EK     ++  E V L        MS RAG F++ 
Sbjct: 324 RAIDVLGADHKLIGAQLQCTMQLLGEKAP--EIVHFEFVSLPEG----SMSTRAGKFVSA 377

Query: 411 RHVVDEVGSDS---------------------------VRFMMLWRKNSELLDFDFCKVK 443
             ++DEV   +                           +R+ ++     +   FD+ +  
Sbjct: 378 DELIDEVTKRAFDEVTTRRPELDEATRRNIADSVARAGIRYDIVKISPEKSTVFDWKQAL 437

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +  +++   Y+QYA+AR  SI  +A       D                  E+ L   +A
Sbjct: 438 DFERQS-GPYIQYAHARACSILEKAGAFEECYDLAT-------------EQEIILAKKIA 483

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++P VIE       P+ LA Y ++LA  F+  + +    P L+    +  ++   RL LV
Sbjct: 484 KFPSVIEKVVTELRPHLLATYAHELADTFNTFYHYE---PVLK----SEGEVRDRRLTLV 536

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV + +   L  +G+++ + M
Sbjct: 537 KAVQNTLQESLETLGIDAIHTM 558


>gi|148643291|ref|YP_001273804.1| arginyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|166232806|sp|A5UMK8|SYR_METS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|148552308|gb|ABQ87436.1| arginyl-tRNA synthetase, ArgS [Methanobrevibacter smithii ATCC
           35061]
          Length = 575

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 141/624 (22%), Positives = 265/624 (42%), Gaps = 90/624 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILD-------RIVIERPRDCAHGHLSTNAAMILSR 55
           ++ +   +  + + +   K +V+  + +          +E P +   G L++  A  L++
Sbjct: 1   MYFEIEKQAIDAISDALDKFEVDNTLENFQVEDEKNFRLEFPPNPDMGDLASTIAFSLAK 60

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            L   P  IA  IV +++I    + V   G  ++N ++  S   K L   V  G +YG  
Sbjct: 61  KLRKAPNLIASEIVEKLEIPEIFEKVEAIGP-YVNFFIDYSNFSKKLLEYV--GKDYGH- 116

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           L     K+ +E  SANP GP+H+GH R ++ GD+L  L+  +G EV  +YY+ND G QI 
Sbjct: 117 LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRLLKVAGREVETQYYVNDMGRQIA 176

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----YSSELLNFPE---EK 228
            +   +     + + + + D  +     +Y K   K   D+    +   L+   E   E 
Sbjct: 177 IIVFGITELGLK-IEDQEGDKIDHKIGRLYFKANQKLNEDESLVSHVDNLIERYEGGAEP 235

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L  + +  V++ +  I++ L  +NI HD F+ E  F R     + D+I     +G+V  
Sbjct: 236 ELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQFVR--SGEVDDMIKYFDHEGFVSY 293

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G +                      T    + +  L +SDG+  Y   DLAY + K  +G
Sbjct: 294 GDV-----------------TYIDLTCFQIEKEFVLRRSDGTSLYSTRDLAYHRYKATQG 336

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D ++ ++GSDH    +++  +   +  ++    V+  E + L        MS R G F+
Sbjct: 337 -DVVLDILGSDHKLAAQQINVIFKEI-LREIPPEVIFYEFITLPSG----SMSTRKGVFV 390

Query: 409 TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
           ++  +VDE                           +G  ++RF +      + L F + +
Sbjct: 391 SVDELVDEAVKRAADEIKSRNPDLTDEEIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDE 450

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                +      +QYA+AR   + +++      L         +  +   + +E  LI  
Sbjct: 451 ALSFERG--CASIQYAHARACKLLKKSGKDVSSL--------AVSDDWVPNENEKDLIRT 500

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           +A++P+VIE+    +  + +  Y  DLA  F+  +   +       V  ++ + T  RL 
Sbjct: 501 IAKFPQVIEDCANKKRIHNITQYCQDLAGAFNKFYKAEQ-------VIGSDVEDT--RLV 551

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           LV    + + + L+I+GV +P +M
Sbjct: 552 LVDRAKTTLKNALDILGVPAPQKM 575


>gi|310641644|ref|YP_003946402.1| arginyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
 gi|309246594|gb|ADO56161.1| Arginyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
          Length = 574

 Score =  344 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 120/609 (19%), Positives = 221/609 (36%), Gaps = 81/609 (13%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75
           + I     +E+K +   + E P     G ++      L++     P  IA  +   +   
Sbjct: 8   QAIVAHTGLEEKEVLS-LFEVPPQPEWGDVAF-PCFALAKKFRKSPQHIAMELAE-LVSH 64

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
               +   +G  ++N+ L  S     + + + S  E+ +   G G +V I+  S N   P
Sbjct: 65  EAGLTASASGA-YVNITLDRSVHIPPMLAEL-SKAEFLKPNTGYGQRVVIDMSSPNIAKP 122

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDS 194
             +GH R  V+G  L  ++  +GY      ++ D G Q      +   W  ++ L ++  
Sbjct: 123 FGIGHLRSTVIGAALYRILGETGYVPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHDPI 182

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--VKDYSVQAMMKIIRDDLKAL 252
                 Y   + +       ++   E     E+       + ++ V+  +       + L
Sbjct: 183 GESLKLYVRFHQEAEHDPSLEEEGREWFRRLEQGDTEAQQLWEFFVEVSLSEFDRMYQRL 242

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           NI  D  + E  ++      ++ ++  L  +G + E       S       ++ +QL   
Sbjct: 243 NISFDHVLGESFYN----DKMQAVVAQLRAKGLLEE-------SDGALVVRLEDEQL--- 288

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA 371
                      +LK DG+  Y   DLA    ++E    D ++YV+G +   + +++ AV 
Sbjct: 289 -------PPCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQVFAVL 341

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
               E  A+    +   +  +      KMS R G  + L  V+DE               
Sbjct: 342 KHAGEIWAEQCEHVPFGLMRFAGK---KMSTRRGKVVKLEEVLDEAVARAQAIITEKNPN 398

Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                     VG  ++ F  L       +DF   +      E    YVQY +AR RS+  
Sbjct: 399 LLEQQAIAEDVGIGAIIFGDLKNNRLNEVDFSLEEALTFEGE-TGPYVQYTHARIRSLLE 457

Query: 467 QAK----------DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +A+          D     D      N++  E   D     L+  L  Y   +  A    
Sbjct: 458 KARARSDVDSNSSDNVLAQDGHSPDLNIVSDEMLGDAG-WALLKQLDRYHGQLIRAARQL 516

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +A +  D A  F+  ++  R       V          R+QL    A ++ S L +
Sbjct: 517 EPSVIARFALDTAQAFNRFYAKER------IVDGG-----QWRIQLAEQTADMLASTLRL 565

Query: 577 IGVESPNEM 585
           +G+++PN M
Sbjct: 566 LGLKAPNRM 574


>gi|56808424|ref|ZP_00366172.1| COG0018: Arginyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 492

 Score =  344 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 113/537 (21%), Positives = 213/537 (39%), Gaps = 78/537 (14%)

Query: 82  FIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
            +A   +IN +L       ++L  ++ +G +Y +   G+G  V I+  S N   P  +GH
Sbjct: 1   VVAVGPYINFFLDKVKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGH 60

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
            R  V+GD+LA++ A  GY+  +  ++ D G Q   L ++      +A        P   
Sbjct: 61  LRSTVIGDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQ---AHPIDE 117

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKALNIQHD 257
              +Y++      A+      ++    +W   ++D    + +       + L   N  +D
Sbjct: 118 LLKLYVR----INAEAEIDPTVDEEAREWFRKLEDGDKEATELWQWFRDESLLEFNRLYD 173

Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
                 D + G+      + +++D L  +  + E                 +   +    
Sbjct: 174 QLHVTFDSYNGEAFYNDKMDEVLDLLEAKNLLVES----------------KGAQVVNLE 217

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
             G +    + KSDG+  Y   DLA    +     F   +YV+G++ + + K+L+AV   
Sbjct: 218 KYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSVYVVGNEQAAHFKQLKAVLKE 277

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI------------------------- 408
           +    +  ++       + + G   K+S R G+ I                         
Sbjct: 278 MGYDWSD-DMTHVAFGLVTKGGA--KLSTRKGNVILLEPTVAEAINRAASQIEAKNPNLA 334

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               V   VG  +++F  L        DFD   +     E    YVQYA+AR +SI R+A
Sbjct: 335 DKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGE-TGPYVQYAHARIQSILRKA 393

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                      F  +     S  D    ++I  + ++PR+I+  +   EP  +A +  +L
Sbjct: 394 D----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINL 443

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           A  F+ +++H R          ++      RL L +A A+++   L ++GV++PNEM
Sbjct: 444 AQSFNKYYAHTRIL--------DDNSERDNRLVLCYATATVLKEALRLLGVDAPNEM 492


>gi|325103508|ref|YP_004273162.1| arginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324972356|gb|ADY51340.1| arginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 590

 Score =  344 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 129/629 (20%), Positives = 239/629 (37%), Gaps = 96/629 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L   + +             +I +E+ +    GH  T       R     P   A+++  
Sbjct: 4   LAQAISQAFKASFEIDIEPSQITLEQTKKEFEGH-QTLVVFPFVRQTKKSPEQTAQILGE 62

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            +K +      F   KGF+N+  S ++   +  + + +       +   G KV +E+ S 
Sbjct: 63  YLKENYKEIESFNVIKGFLNIVYSDAFWLNVFQTEISADDF--AQMPFNGEKVMVEYSSP 120

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N   P+H+GH R  ++G ++A L+  SGY+V +   +ND G  I    L+ + ++     
Sbjct: 121 NTNKPLHLGHIRNNLLGFSVAELLKASGYQVIKANLVNDRGIHICKSMLA-WQKFGNGET 179

Query: 191 NNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK------------ 234
              S L   +  G Y     K   KE+    +        +K  P++K            
Sbjct: 180 PESSGLKGDHLVGKYYVIFDKEYKKEIEGLKAQGKTEEEAKKEAPLIKEAQAMLLKWEQG 239

Query: 235 DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           D  V  + K +         +  K L +  D F  E D +       +DI++    +G  
Sbjct: 240 DQEVIQLWKTMNSWVYAGFEETYKELGVNFDKFYYESDTYLLG----KDIVEEGLAKGVF 295

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           ++                +   +    T  G D ++ + + DG+  Y   DL   + KY+
Sbjct: 296 FKK---------------EDNSVWIDLTEDGLD-EKLVRRGDGTSVYITQDLGTAQLKYD 339

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             G D  IYV+G++   + K L  +   + +  A     L   +     G   KM  R G
Sbjct: 340 EFGVDRSIYVVGNEQDYHFKVLFLILKKLGKTWADGLYHLSYGMVDLPSG---KMKSREG 396

Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436
             +    +++E                             +G  ++++ +L  +  + L 
Sbjct: 397 TVVDADDLIEEMRVTAKEKTEALGKVDHFDDEEKEKLYHMIGMGALKYFLLKVEPKKRLL 456

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  K     + N   ++QY++AR +S+  +A        +D    + +  E   +T EL
Sbjct: 457 FDP-KESIDFQGNTGPFIQYSHARIKSVLNKAG-------YDNQNISTVNPEKLQET-EL 507

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +LI  L+ YP V+  A     P  +A Y YDLA  ++  +           ++  +  L 
Sbjct: 508 ELIQVLSRYPSVLNAAARDFNPGAIANYTYDLAKAYNKFYQSET------ILKVEDADLK 561

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL+L +  A  I   + ++G+E P  M
Sbjct: 562 TFRLKLSYHTADTIRKAMALLGIEVPERM 590


>gi|332886430|gb|EGK06674.1| arginyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 598

 Score =  344 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 120/634 (18%), Positives = 235/634 (37%), Gaps = 93/634 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              RL+  +      +  +     ++ +++ +    GH  T       +     P   A+
Sbjct: 3   LEIRLQEVIINAIESLYGQVVTAGQLSLQKTKKEFEGHY-TLVVFPFLKMSKKGPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    S F   KGF+NL ++ +    +L+ +  +              V +E
Sbjct: 62  EIGEWLKANASEVSSFNVIKGFLNLTIATTCWIDVLNEVYAAESYGITKADNNSPLVMVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G  L+ ++  +G  V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHIRNNLLGFALSEVLKANGNRVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
                  +     +  G Y     KH   ELA+  S  L     E    ++         
Sbjct: 181 NGETPESTGKKGDHLVGDYYVMFDKHYKAELAELQSKGLSKEEAEAQSTLMAEARNMLRL 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D    ++ K +         +  K L +  D    E + +       +D + N  +
Sbjct: 241 WEGGDVETVSLWKKMNSWVYAGFDETYKRLGVDFDEIYYESETYLDG----KDTVLNGLK 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G +Y+                +   +    T  G D  + LL+SDG+  Y   D+   +
Sbjct: 297 NGVLYQK---------------EDGSIWIDLTAEGLD-HKLLLRSDGTSVYMTQDIGTAQ 340

Query: 343 CKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
            +++   D   MIYV+G++ + + + L  V   +  +  +  V     +    +G   KM
Sbjct: 341 QRFKAHKDLNKMIYVVGNEQNYHFQVLSIVLDKLGFEFGKGLVHFSYGMVELPEG---KM 397

Query: 401 SKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKN 431
             R G  +    +VDE                             VG  ++++ +L    
Sbjct: 398 KSREGTVVDADDLVDEMVATAKETSQELGKLEGVSEQEANNIARMVGMGALKYFILKVDP 457

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            + + F+  K       N   ++QY +AR +SI R+A +    +         +  +   
Sbjct: 458 KKNMTFNP-KESIDFNGNTGPFIQYTHARIQSILRKAAEQGISI------PTTLSADISL 510

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
              E  L+  +AEY  +++ A     P  +A Y+YDL   ++  +           ++  
Sbjct: 511 SVKEEGLVQQVAEYASIVKQAGDEYNPALIANYIYDLVKEYNQFYHD------YTILKEE 564

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N  L   RL L   V  ++ SG++++G+E P+ M
Sbjct: 565 NADLKNFRLILSDNVGRVVKSGMSLLGIEVPDRM 598


>gi|50403850|gb|AAT76680.1| arginyl-tRNA synthetase 2 [Oenococcus oeni]
          Length = 532

 Score =  344 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 121/566 (21%), Positives = 231/566 (40%), Gaps = 72/566 (12%)

Query: 51  MILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
             LS+   L P  +A  I  R+ K D + + +   G  +IN +L        L S +++ 
Sbjct: 8   FGLSKFFHLSPDQVAFSIYNRLNKSDTNFEKIEHNGA-YINFFLDRKREASTLISDIINN 66

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
             YG+N  G    + +E  S N   PM +GH R  ++G++L+ +   +GY+  +  ++ D
Sbjct: 67  DSYGKNNAGNKKTIIVELSSPNIAKPMSMGHLRSTMIGESLSRIANENGYKTIKINHLGD 126

Query: 170 AGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE- 227
            G Q   +  +   W  +  +  N  D     Y  +  +        +         E+ 
Sbjct: 127 WGTQFGLMIEAYKLWGNKDIIEQNPVDELVKLYVRINKEAETNPELSEAGRSWFKKLEDG 186

Query: 228 --KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
             +   + K +   ++ +  +   + L +  D    E  +       +  IID L  +G 
Sbjct: 187 DPEARELWKWFKNVSLREFNKV-YQRLGVTFDSMNGESFYQ----DKMSVIIDLLKNKGI 241

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           + E       S+  Q  D+      +   +        +L+SDG+  Y   DLA    + 
Sbjct: 242 LTE-------SRGAQIVDLPSLLPAYNLPVS------IILRSDGATQYATRDLATAFYRQ 288

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
               FD  +YV+G++   Y K+++A+        +  ++       +  +G   KMS R 
Sbjct: 289 TTYHFDKCLYVVGAEQKEYFKQIKAILKLAGFNWSD-DMEHIYFGLITFNGK--KMSTRK 345

Query: 405 GDFITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDF 439
           G+ + L  V+D                         +VG+ +V F  L    +  +DFD 
Sbjct: 346 GNVVKLEQVLDSAHKLAKNQIAEKNPNLSNSDKVAEQVGTGAVIFNDLMNDRTLSIDFDL 405

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ +  + +   YVQY + R  SI R+               ++       D     ++
Sbjct: 406 DQIVKF-EGDTGPYVQYTHVRAVSILRK----------SSIKIDINDAIKLLDNDSWAVV 454

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             L+ YP +++ A I +EP  +A YL +LA  F+ ++S          +   +++L+  R
Sbjct: 455 SKLSVYPDIVKRAWILREPSIIAKYLLNLAHEFNSYYSKVH-------ILVEDKQLS-SR 506

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LV AVA ++  GL ++ V++P++M
Sbjct: 507 LALVDAVAIVLKKGLELLDVQAPDQM 532


>gi|297829930|ref|XP_002882847.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328687|gb|EFH59106.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 579

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 124/621 (19%), Positives = 230/621 (37%), Gaps = 99/621 (15%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLGL----- 59
           +   +L             ++  +  +V+             N AM L S+  G      
Sbjct: 11  NLKQQLVKLFDASLKLTVPDEPSVKPLVV----VGKFEDYQCNNAMGLWSKVKGKGTQFT 66

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            PL +AE +V  +     V+S  +A  G++N+ +          +++++GIE     +  
Sbjct: 67  RPLAVAEALVTNLPTCDMVESCSVAQPGYVNVSI---------ENMLINGIETWAPTL-S 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S N    MHVGH R  ++GDT+A ++ +S  EV R  ++ D G Q   L  
Sbjct: 117 VKRAVVDFSSPNIAKKMHVGHLRSTIIGDTIARMLEYSNVEVLRRNHVGDWGTQFGMLIE 176

Query: 180 SVFWRYQQ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           ++F ++     A+     D+   Y P         +   K    ++     +    V   
Sbjct: 177 NLFEKFPDSNSAMETAIEDIQSLYKPSKTKFDADLDFKRKAQQAVVRL---QGGDPVYHK 233

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + Q + +I R D   +  +  + + E       P  I ++I+ L  +G V E        
Sbjct: 234 TWQKLCEISRADYAEIYQRLRVELEEKGESFYKPY-IANMIEELNSKGLVEES------- 285

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D  +++F        +   L+KSDG +TY   DLA    +  E   + +IYV
Sbjct: 286 --------DGARVMFIKDFKNPCM---LVKSDGGFTYDTTDLAALWYRLNEEKAEWIIYV 334

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMSKRAGDFITL 410
             +    +  R    A  V               +   V    DG   +   R  + + L
Sbjct: 335 TDAGQQEHFDRFFKAARQVGWLPDNDETYPRVSHVKFGVVKGEDGK--RFRNRDREIVPL 392

Query: 411 RHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441
             ++DE                             +G  +V++  L    S    F + K
Sbjct: 393 ADLLDEAKTRSKAALIERAKEKEWTPEELDQTAEAIGYGAVKYADLMNNISTDYKFSYDK 452

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +  + K N   Y+ YA+AR  SI +++         D+       + +    +E  L +H
Sbjct: 453 MLNE-KGNTAVYLLYAHARICSIIKKSG-------KDIDELKKTGKLALDHANERALGLH 504

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L ++   +E A     P+ L  YLYDL+  +   +S+ +       V  +  +    RL 
Sbjct: 505 LLQFAETVEEACTKLLPHILCEYLYDLSEHYTKFYSNCQ-------VNGSAEE--TSRLL 555

Query: 562 LVHAVASIINSGLNIIGVESP 582
           L  A A ++    +++G+   
Sbjct: 556 LCEATAIVMRKCFHLLGITPV 576


>gi|296121593|ref|YP_003629371.1| arginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013933|gb|ADG67172.1| arginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 660

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/647 (20%), Positives = 227/647 (35%), Gaps = 120/647 (18%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           D   G    N AM + + +G     IAE IV  +KID   +   +AG GFINL L  S+L
Sbjct: 34  DTRFGDFQANCAMPMQKSVGKPAREIAEQIVQGLKIDDICEPATVAGPGFINLKLKESWL 93

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  +      ++ G        +  ++F S N   PMHVGH R  V+G  L  ++   G
Sbjct: 94  EQAATEC-AHDVQLGLEPASPSRRYIVDFSSPNVAKPMHVGHLRSTVIGHALYKVLKKLG 152

Query: 159 YEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVY-------LKHVG 210
           + V  + +I D G Q   +      +R+++A            Y  V        LK   
Sbjct: 153 HSVQSDNHIGDWGTQFGMIIFGYKNFRHEKAFEAAPVAELARLYRLVNQLSDYHALKSTF 212

Query: 211 KELADKYSSELLNFPEEKWLPIV-------KDYSVQAMMKIIRDDLKAL-----NIQHDI 258
            E+  +  +   +  E +            K   +Q  +K    +LK       +    I
Sbjct: 213 SEIEARVPTATKSLAEAQEQLTYAAKSGVKKSPELQQQVKKAEAELKEATEALESATKKI 272

Query: 259 FISEDD-----------------------FHRGDPSPIR----------DIIDNLARQ-- 283
              E D                        H GDP  +             ++ L  +  
Sbjct: 273 TAVESDPELLEIAAKHPRIAEEARLETAKLHAGDPENLALWNQFLPDCLKALEGLYARFD 332

Query: 284 -------GYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
                  G  +   + P   +  +K  +       Q +F   + G +    + KSDG++T
Sbjct: 333 LKFDMTLGESWYNPMLPGVLERLEKARLLTTSQGAQCVF---IEGYEAPFIVRKSDGAFT 389

Query: 333 YFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   DLA  + + +    D ++YV+ S  S +   L A A  +     ++  +    + L
Sbjct: 390 YATTDLATIEYRVDSLQADAILYVVDSRQSEHFDMLFATARKLGYSNVELTHVKFGTI-L 448

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE---------------------------------VG 418
             D  P K   R+GD + L  ++DE                                 VG
Sbjct: 449 GEDKRPFK--TRSGDTVGLESLLDEAVVRARQIVNAGDDGKPTGAELDDTTRQAIAEIVG 506

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
              + +  L         F F K+   ++ +   Y+QYAYAR   IFR+       +D +
Sbjct: 507 IGGIIYADLHHSRESDYTFSFEKML-ATRGDTATYMQYAYARTHGIFRKGG-----IDIE 560

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              +   P        E  L + L  +   + +      P  L  YL++ A+ F   +  
Sbjct: 561 QLRKGKHPL-RLTQPYERMLALQLVRFGEALHDVAAEYRPNVLTQYLFETANRFSTFFDE 619

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  +  +   RL L    A ++  GL ++G+    +M
Sbjct: 620 C------PVLKETDDSIRNSRLLLCDWTARVMKEGLGLLGIRVAEKM 660


>gi|297588542|ref|ZP_06947185.1| arginine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573915|gb|EFH92636.1| arginine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 564

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 127/609 (20%), Positives = 237/609 (38%), Gaps = 76/609 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +K  +   D  +  EK+I D  +IE P +   G  +      L++     P  IA
Sbjct: 3   NFKEEVKQIILGFDTGL-TEKEISD--LIEIPPNSDMGDYAFPV-FKLAKTFRKAPNLIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +  +   + ++  +   G  ++N ++  S L + + +  V   ++G   IG G  V  
Sbjct: 59  EELAKKEFSNENIKKITNVGP-YVNFFVDNSKLVESVLTEAVKD-DFGSGHIGVGKNVVF 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-LSVFWR 184
           +F S N   P H+GH R  V+G+ + ++M + G+  T   YI D G Q   +    + W 
Sbjct: 117 DFSSTNIAKPFHIGHLRSTVIGNAIRNIMKYQGFNTTGVNYIGDYGTQFGMMISAYLKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +  +  +        Y          E     + +  +  E+K    VK      +   
Sbjct: 177 DEDKINADPIKELLNLYVKYNKIAKEDESYMDEARDWFDKLEKKDPTAVK------LWSW 230

Query: 245 IRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            R+  LK     +D+   E D   G+      I D ++ + ++  + E       S    
Sbjct: 231 FREISLKEFQRVYDLLGVEFDNFNGESFHSQFIGDALEAIDKKNLLEE-------SDGAM 283

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             ++D + L              + KS+GS TY   D+A    + +   F   +YV+ S 
Sbjct: 284 IINLDDENL----------PPVLIKKSNGSSTYLTRDIATAMYRKKTYDFYKNVYVVASQ 333

Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRL---------------------YRDGMP 397
              + ++L AV   +          +   +V +                       D   
Sbjct: 334 QKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDVLNRAIDKTK 393

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
             + +R  +      V  +VG  +V F  L+    +   FD+ +V     E    Y QY 
Sbjct: 394 SIIEERNPNLENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE-TGPYTQYT 452

Query: 458 YARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +AR  SI  + + ++  +  FDL            D +E+ ++ HL+++  V+ NAT   
Sbjct: 453 FARSCSILDKGEFELKENSKFDLL----------VDDTEIDIVKHLSKFEEVLLNATEKY 502

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  L  Y  +LA +F+  +++         +     +L   RL L ++V   +   L++
Sbjct: 503 EPSFLTRYTVELAKLFNKFYANC-------PINTVEDELKYQRLYLTYSVNKCLKLSLSL 555

Query: 577 IGVESPNEM 585
           +G+E+P  M
Sbjct: 556 LGIEAPVRM 564


>gi|160879680|ref|YP_001558648.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160428346|gb|ABX41909.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 624

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 125/589 (21%), Positives = 237/589 (40%), Gaps = 83/589 (14%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFI 89
           ++E P +  +G  S       ++   + P  IAE+I  +IK    +  + ++ +   GF+
Sbjct: 83  LLEVPSNQIYGDYSL-PCFYFTKIFKMAPKLIAEVIKEKIKMMDTEGILKNLEVVN-GFL 140

Query: 90  NLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           NLYL+       +  ++  G   ++G    G    V I++ S N     HVGH R  ++G
Sbjct: 141 NLYLNKE---NHIKKLLFEGRKEDFGCGKAGLAQTVCIDYSSPNIAKNFHVGHLRTTLIG 197

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYL 206
           ++L  +    GY+V R  ++ D G Q   L ++   W  ++A+     +     Y     
Sbjct: 198 NSLYHIYKKLGYQVIRINHLGDWGTQFGKLIVAYQKWSNKEAVEEKGIEELLRIYIKFSK 257

Query: 207 K-HVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +     EL ++  S  +     E++ L I K +   +M++  R     L +  D +  E 
Sbjct: 258 ESEQNLELEEEARSWFVKMEQGEKEALTIWKWFKEISMIEFERI-YDLLGVSFDYYTGES 316

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +       + D++  L  +  + E       S+  +  D++            D     
Sbjct: 317 FY----MDKVPDLVRELMEKHLLSE-------SEGAKIVDLN----------QFDMPPCM 355

Query: 324 LLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-I 381
           ++K DGS  Y + DLA     K +  FD  IYV G +   + +++  V   +  + +Q +
Sbjct: 356 IIKKDGSSIYHSRDLAAVLYRKKQYQFDKCIYVTGQEQKLHFEQVFKVIELMGYEWSQNL 415

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416
             +   LVRL      +K+S R G+ +    ++ E                         
Sbjct: 416 IHVPYGLVRL----QGVKLSSRTGNIVYAEDILTEAIKRALELIHQKNPNLDQPKEVARK 471

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G  ++ F  L+ +  + +DF +  V    +     YVQY YAR +SI ++A++     +
Sbjct: 472 IGIGAIIFHDLFHQRMKDVDFSWEDVLSF-EGTTGPYVQYTYARAKSILKKAENKPKIDE 530

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D+   + +   S        L+  ++EY   I  A    EP  +A Y   L++ F+  +
Sbjct: 531 VDVSLLSDVTTYS--------LLKIISEYKESIYEAANRFEPSVIARYTILLSTAFNKFY 582

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      +   +  L   RL +V     I    + ++G+E P EM
Sbjct: 583 HECN-------ILNADENLRDARLIVVDLTQEITKDAMGLLGIECPEEM 624


>gi|182414382|ref|YP_001819448.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841596|gb|ACB75848.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 590

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 126/581 (21%), Positives = 216/581 (37%), Gaps = 81/581 (13%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFINLYLS 94
           R  D  HG    N  +  ++    +P  +AE +VA +  +      V IAG GFIN  L+
Sbjct: 34  RVADAQHGDYQANGVLGYAKSRKQNPRALAEKLVAALPAEFTQSTRVTIAGPGFINFTLA 93

Query: 95  PSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           P  L   L +      +  G      G    +++ S N    MHVGH R AV+G+ +  L
Sbjct: 94  PGSLLAWLRTYATAEQLAAGAAADHAGQTWVVDYSSPNTAKQMHVGHLRSAVIGEAICRL 153

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYP-GVYLKHVGK 211
           +AF+G  V R+ ++ D G Q   L      W    AL  +  +  E  Y  G +    G 
Sbjct: 154 LAFTGARVIRDNHLGDWGTQFGKLIYGYKRWADPAALAADPIEELERLYKLGHHATPEGS 213

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              ++   EL+     + + + + K +S  + +   +     L I  D  + E  ++   
Sbjct: 214 PELEEAKRELVKLQSGDPENVALWKKFSEVS-LGAFQQIYDRLGIHFDHHLGESFYN--- 269

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST--MVGDDVDRP---- 323
              +  +   L   G                  + D   ++F         + +RP    
Sbjct: 270 -DKVERVYGELTDIGLA---------------ENSDGALVVFHDEHPRFSRNAERPNPFM 313

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKK 378
           + K+DG+  Y + DLA    + E    D ++ V     S + ++L             + 
Sbjct: 314 VRKADGASGYASTDLATALYRTEHFQADGIVIVTDFRQSDHFEQLFLTVKKWFAAKGYRL 373

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            Q++ +    V    DG  +K   R G  I L+ ++DE                      
Sbjct: 374 PQLHHVTFGAVT-GEDGKALK--TRDGGTIKLKALLDEAVERAFAIVSEKNPELPEDERR 430

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                VG  +V++  L +  S    F + K+    + N   Y+ YA AR  SIFR+A   
Sbjct: 431 AIAEAVGVGAVQYADLSQNRSSNYVFSWEKMLSL-EGNTAPYLLYAVARIHSIFRKAGAT 489

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +      P            +E+ L   L ++P  +  AT    P+ L+ YL++LA  
Sbjct: 490 PGE------PATESAATEPETPTEIALARKLLKFPDAVRLATETLRPHFLSLYLFELAGD 543

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +    +  R       V  ++  +   RL L      I+ +
Sbjct: 544 YSTFNNADR-------VLVDDPVIRARRLLLCSRTLLILET 577


>gi|145343622|ref|XP_001416415.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
 gi|144576640|gb|ABO94708.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
          Length = 600

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 120/565 (21%), Positives = 209/565 (36%), Gaps = 73/565 (12%)

Query: 39  DCAHGHLSTNAAMI----LSRP---LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + + G   +++AM     L++        P  +A+ IVA I      DS+ IAG GFIN 
Sbjct: 89  NTSLGDFQSSSAMQIFSALAKAGETSFRSPRDVADEIVAGISEREMFDSITIAGPGFINF 148

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LS +Y+R  L     S              V ++F S N    MHVGH R  ++GDTL 
Sbjct: 149 RLSDNYIRSELFRETKSAELGP----TIKRHVLVDFSSPNIAKEMHVGHLRSTIIGDTLC 204

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209
           ++  F GY  TR  ++ D G Q   L     +  +  +  +   SDL   Y        V
Sbjct: 205 NVFEFCGYTTTRVNHVGDWGTQFGMLI---QFMKENGISPDSSVSDLQACYKQAKQKFDV 261

Query: 210 GKELADKYSSELLNFP--EEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDF 265
             +   K    ++     + +   + +    + +A  + I D LK   ++      E  +
Sbjct: 262 DDDFKAKSKDMVVKLQSYDPETAHMWRQICSASRAEFQTIYDRLKIRIVEK----GESFY 317

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +   PS    ++D L  +  + E                D   L   +    DD      
Sbjct: 318 NDMIPS----VLDELQSKRLIVE----------------DAGALCIFTE--SDDTPVICR 355

Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--IN 382
           KSDG + Y + DLA  + +      D +IYV       + K +   A       AQ  + 
Sbjct: 356 KSDGGFNYASTDLAAVRHRIMSEKADKIIYVTDQGQHKHFKAIFKTANEAGWGDAQVALE 415

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---VGSDSVRFMMLWRKNSELLDFDF 439
            +   +V    +    K  +  G  +T   +      +G  SV++  L         F F
Sbjct: 416 HVGFGVVLDEAEERCFKFLEEKGTNLTTDEIKHASKVLGVSSVKYADLQNNRLTNYTFSF 475

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ +  K N   Y+QY++AR  +I +++        F +               E  L 
Sbjct: 476 DRMLDL-KGNTAMYLQYSHARVATILQKSSFAGRPDQFSIS-----------HEEERLLA 523

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + + ++   +        P KL  YLY L S F+  ++        + +  +N +    R
Sbjct: 524 IQIIKFQDALLTTLQDLAPSKLCEYLYTLCSTFNNFYAEC------KVIGGDNEE---SR 574

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           + L       +    +++G+E    
Sbjct: 575 IYLCERTLYTMKLTFSLLGIEPLER 599


>gi|255011461|ref|ZP_05283587.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 597

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 115/633 (18%), Positives = 240/633 (37%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   +      +  +     ++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEDKLVASVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKGPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + F   KGF+NL ++ +   ++L+ I         +       V IE
Sbjct: 62  EIGEYLKANEPAVAAFNVIKGFLNLTIASAAWIELLNEIHADAQYGIVSADENAPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+ + +Y 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA-WQKYG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
                  S     +  G Y     KH   E+A+     +     E   P++         
Sbjct: 181 NGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMTKEEAEAASPLMNEAREMLVK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  + + +  D    E + +       ++ +     
Sbjct: 241 WEAGDPEVRALWQMMNNWVYEGFDETYRKMGVGFDKIYYESNTYLEG----KEKVMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ ++                +   +    T  G D  + LL+ DG+  Y   D+   K
Sbjct: 297 KGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  ++++ +L     
Sbjct: 398 SREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYFILKVDAR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR +S+ R+A +    +        V+P   E  
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVI------PQVLPANIELS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V+  A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 565 EDVKLFRVALSANIAKVVRLGMGLLGIEVPDRM 597


>gi|207366683|emb|CAR64264.1| arginyl-tRNA synthetase [Glycine max]
          Length = 597

 Score =  343 bits (881), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 117/590 (19%), Positives = 214/590 (36%), Gaps = 92/590 (15%)

Query: 41  AHGHLSTNAAMIL-SRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
                  N AM L ++  G       P  + + I+  +     ++S  +AG GF+N+ LS
Sbjct: 49  KFADYQCNNAMGLFAKMKGKQTGFRGPQAVGQAILNHLPQSEMIESCSVAGPGFVNIVLS 108

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             ++ + L  +++ GI+     +     V ++F S N    MHVGH R  ++GDTLA + 
Sbjct: 109 KKWIAQRLERLLIDGIDKWAPRL-PVKTVLVDFSSPNIAKEMHVGHLRSTIIGDTLARMF 167

Query: 155 AFSGYEV-TREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGVYLKHVG 210
            FS  E   R  ++ D G Q   L   +F  Y      N++   DL   Y          
Sbjct: 168 EFSRVETLIRRNHLGDWGTQFGMLIAHLFDTYPNPEDFNEAAIGDLQAFYKASKVRFDND 227

Query: 211 KELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            E   +    ++     EEK+    +     +  +  +   + L ++ +    E  ++  
Sbjct: 228 PEFKLRAQQSVVRLQSGEEKYHRAWQQICDISQAEFEKV-YQRLGVRLEA-RGESYYN-- 283

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   ++ L   G + E                D  +++F   + G ++    +K D
Sbjct: 284 --DLIPQTLERLDNLGLIEED---------------DGARVIF---VEGVNIPIIAVKRD 323

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN----- 382
           G Y Y + DLA    +      +  IYV       +   +              N     
Sbjct: 324 GGYNYSSTDLAALWNRLNVENVEWNIYVTDVGQWQHFDMVFKAFRRAGWLPNHENEFPKC 383

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
             +   + L  DG   +   R+ + + L  ++DE                          
Sbjct: 384 THIGFGLVLGEDGK--RFRTRSSETVRLVELLDEAKRRCKASLLERDAVKDWSEEEIEKT 441

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  +V++  L         F F ++    K N   Y+QYA+AR  SI R++     
Sbjct: 442 AEAVGYGAVKYADLRINRLTNYTFSFDQMLN-DKGNTAVYLQYAHARICSIMRKSGKDME 500

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           ++  +    +           E  L +HL ++P V E +     P  L  YLY+L  +F 
Sbjct: 501 EIKKNGNIVS-------NHEDERALGLHLIQFPEVFEESLTNLLPNVLCEYLYNLTEIFT 553

Query: 534 -GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
              +++ +       V  +  +    RL L  A  +++     ++G+E  
Sbjct: 554 KKFYTNCQ-------VVGSPEE--TSRLLLCEATVTVMRQCFYLLGIEPV 594


>gi|313149279|ref|ZP_07811472.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313138046|gb|EFR55406.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 599

 Score =  343 bits (881), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 115/633 (18%), Positives = 240/633 (37%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L   +      +  +     ++ +++ +    GHL T       R     P   A+
Sbjct: 5   IEDKLVASVISGLKALYGQDVPAAQVQLQKTKKEFEGHL-TLVVFPFLRMSKKGPEQTAQ 63

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +K +    + F   KGF+NL ++ +   ++L+ I         +       V IE
Sbjct: 64  EIGEYLKANEPAVAAFNVIKGFLNLTIASAAWIELLNEIHADAQYGIVSADENAPLVMIE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G+ LA+++  +G +V +   +ND G  I    L+ + +Y 
Sbjct: 124 YSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSMLA-WQKYG 182

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-------- 234
                  S     +  G Y     KH   E+A+     +     E   P++         
Sbjct: 183 NGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMTKEEAEAASPLMNEAREMLVK 242

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  + + +  D    E + +       ++ +     
Sbjct: 243 WEAGDPEVRALWQMMNNWVYEGFDETYRKMGVGFDKIYYESNTYLEG----KEKVMEGLE 298

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G+ ++                +   +    T  G D  + LL+ DG+  Y   D+   K
Sbjct: 299 KGFFFKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVYMTQDIGTAK 342

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 343 LRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMK 399

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  ++++ +L     
Sbjct: 400 SREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYFILKVDAR 459

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR +S+ R+A +    +        V+P   E  
Sbjct: 460 KNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVI------PQVLPANIELS 512

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A++  V+  A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 513 EKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD------FSILREEN 566

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + R+ L   +A ++  G+ ++G+E P+ M
Sbjct: 567 EDVKLFRVALSANIAKVVRLGMGLLGIEVPDRM 599


>gi|323343491|ref|ZP_08083718.1| arginine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095310|gb|EFZ37884.1| arginine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 606

 Score =  343 bits (881), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 118/622 (18%), Positives = 240/622 (38%), Gaps = 61/622 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +++ + +     ++  +      + +++ +    G+L T       +     P   A+
Sbjct: 3   IEAQICSSVIAAVKELYGQDVPAQTVQLQKTKSNFEGNL-TLVVFPFLKISKKKPEETAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +       S F   KGF+NL ++ S    +L+SI        +        V IE
Sbjct: 62  EIGDMLVKGCAAVSSFNVVKGFLNLNIARSAWIDLLNSIDTDDNFGLKIATDSSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G  V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLARIMEANGNRVVKTNIVNDRGIHICKSMLA-WLKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPEEK-----WLPIVK 234
                  S     +  G Y        K   K+L  +Y ++ ++  E +       P++K
Sbjct: 181 NGETPQSSGKKGDHLIGDYYVAFDKHYKEQCKQLEAQYKAQGMSDEEAEKKAATEAPLMK 240

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           + + + ++K  ++D +   +   +              +    D +  +   Y       
Sbjct: 241 E-AHEMLVKWEQNDPEVRALWQKMNTWVYAGFNETYDKLGVCFDKIYYESDTYLVGKAKV 299

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352
           +    +   M        + +  D +DR  LL+SDG+  Y   D+     ++ +   D M
Sbjct: 300 EEGLKKGIFMREADNSVWADLTDDGLDRKLLLRSDGTSVYMTQDIGTATMRFRDFPIDKM 359

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV+G++ + + + L  +   +  K  +  V     +    +G   KM  R G  +    
Sbjct: 360 IYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGMVELPNG---KMKSREGTVVDADD 416

Query: 413 VV-----------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           ++                               VG  ++++ +L     + + F+  +  
Sbjct: 417 LIAGMVKEARDTSDELGKFKDMSEEEKREIARIVGLGALKYFILKVDARKNMLFNPEESI 476

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +    N   ++QY YAR RSI R+A     D D  +     +   +  +  E++LI  + 
Sbjct: 477 DF-NGNTGPFIQYTYARIRSIMRKA-----DADSHIALPEKLDGNAPLNEKEIELIQKMN 530

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+   +  A     P  +A Y Y+L   F+  +           + AN  +  ++RL + 
Sbjct: 531 EFETAVAEAGNNYNPAGIANYCYELTKDFNQFYHD------YSILSANTEEEKIVRLVIA 584

Query: 564 HAVASIINSGLNIIGVESPNEM 585
             VA II +G++++G+E P  M
Sbjct: 585 KNVAKIIKNGMDLLGIEVPERM 606


>gi|298373011|ref|ZP_06983001.1| arginine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275915|gb|EFI17466.1| arginine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 593

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 113/616 (18%), Positives = 238/616 (38%), Gaps = 60/616 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +         ++   D+IV +  +    G  +      L++  G  P  IA 
Sbjct: 1   MKKQITEKVISFCRDRYGKEVSEDKIVFQPTKKEFEGDYTI-VVFPLAKVAGKAPDAIAA 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +       +  KGF+NL +   Y  ++L+ I             K   + IE
Sbjct: 60  EIGDELVAEGLAVRYNVV-KGFLNLVVDRGYFVRLLNEIDSHRQYGFVKANEKSPLMMIE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N   P+H+GH R  ++GD+++ +   SG+ V +   +ND G  I    L+ +  + 
Sbjct: 119 FSSPNTNKPLHLGHIRNNLLGDSISRIQEASGWRVVKTNIVNDRGIHICKSMLA-WKMFG 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKEL---ADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                  S +   +  G Y     +E     ++ +++ +   E +    +   +   + +
Sbjct: 178 NGETPQSSGIKGDHLVGKYYVRFNEEYRKQVEELTAQGVAKEEAERTAPIMREAQAMLKR 237

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKTTQ 300
               D + +++ + +       + G  +  R +    D +  +   Y            +
Sbjct: 238 WEEGDGEVIDLWYMMNNW---VYEGFDATYRSLGISFDKIYYESQTYIVGKKEVLRGLDE 294

Query: 301 KCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGS 358
                ++     + +  D +D + LL++DG+  Y   D+   K +YE    D M+YV+G+
Sbjct: 295 GVFYQKEDGSVWADLTADGLDEKLLLRADGTSVYMTQDIGTAKLRYEDYDIDKMVYVVGN 354

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           + + + + L  +   +  +  Q  V     +    +G   KM  R G  +    ++DE  
Sbjct: 355 EQNYHFQVLAILLHRLGFRWGQELVHFSYGMVELPEG---KMKSREGTVVDADDLIDEMT 411

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      +G  ++++ +L     + + FD  +  +    N
Sbjct: 412 DEAYNITKELGKIAEMTPDEARQTARIIGLGALKYFILKVAPVKNMVFDPRESIDF-NGN 470

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              ++QY  AR  SI R+A D    L+      ++         SE  +I +L+ +  V+
Sbjct: 471 SAPFIQYTNARINSILRKAADDGIVLETVCDTVSI-------SDSEKYIIQYLSSFAEVL 523

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A+    P  +A Y YDLA  F   +           ++  N  +  +RL L   ++ +
Sbjct: 524 GEASRTFSPALIANYCYDLAKEFSRFYHDC------PILREENADVRNLRLVLCRTISKV 577

Query: 570 INSGLNIIGVESPNEM 585
           + + ++++G+E PN+M
Sbjct: 578 LVNAMSLLGIELPNKM 593


>gi|228470787|ref|ZP_04055635.1| arginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307460|gb|EEK16465.1| arginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 604

 Score =  343 bits (880), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 132/650 (20%), Positives = 239/650 (36%), Gaps = 111/650 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+   S  + + L  +           D I +   R    GH++        +     
Sbjct: 1   MSLYRHLSEAIASTLHTLYDLTTT----ADEITLTATRPEFEGHVTF-VVFPYLKASRKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AE I A+++   D+ + +   KGF+NL L+ S     L  I  +          + 
Sbjct: 56  PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDSAWLAALREIAETPHYGHITPTEQS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA ++  SG+ V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELA----------DKYSSELLNFPE 226
            + R+        S     +  G Y     K    ELA          D+          
Sbjct: 176 -WLRWGNGETPESSGKKGDHLIGDYYVRFDKEYRAELAQIRAEHPDWSDEEVEAKSQLMA 234

Query: 227 EKWLPIVK----DYSVQAMM--------KIIRDDLKALNIQHDIFISEDDFHR-GDPSPI 273
           +    + +    D  V+A+         K   +  K + +  D    E D +  G    +
Sbjct: 235 DARQMLRQWEQGDPEVRALWRKMNEWVYKGFDETYKRMGVSFDKIYYESDTYLVGREEVL 294

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R + + L  Q                     +   +       G D  + LL+SDG+  Y
Sbjct: 295 RGLKEGLFEQ--------------------HEDGSVWADFEAEGLDK-KILLRSDGTSVY 333

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRL 391
              D+   K +Y+    D MIYV+G++   + + L  +   +  K  + +      +V L
Sbjct: 334 ITQDIGTAKLRYQDFPIDQMIYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVEL 393

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE----------------------------------V 417
                  KM  R G  +    ++D                                   V
Sbjct: 394 PHG----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVALADKPTAEELRTAEMV 449

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++++ +L     + + F+  +  +    N   ++QY YAR  S+ ++A ++      
Sbjct: 450 GLGALKYFILKVDPRKNMMFNPEESIDF-NGNTGPFIQYTYARICSLLQKADEMGY---- 504

Query: 478 DLFPRNVIPQ--ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
               ++ +P+  E    + E  L+  L +YP V++ A  +  P ++A Y YDL   ++  
Sbjct: 505 ----KHQLPEGGELALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQF 560

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +           ++  +  L  MRLQL   VA  I+S + ++G+  P  M
Sbjct: 561 YHEC------SVLREEDEALRSMRLQLSQTVAETIHSAMGLLGIALPERM 604


>gi|295085554|emb|CBK67077.1| arginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 605

 Score =  343 bits (880), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 125/647 (19%), Positives = 253/647 (39%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKAL-YGQEVPEKM---VQMQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I          +    
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLVQVTDAS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K++++ ++  E       
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 565 ------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 605


>gi|148655458|ref|YP_001275663.1| arginyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148567568|gb|ABQ89713.1| arginyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 613

 Score =  343 bits (880), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 123/649 (18%), Positives = 231/649 (35%), Gaps = 112/649 (17%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIE--RPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            L  +++E    I     ++D  +IE   P+      L+       ++  G+ P  +A+ 
Sbjct: 4   ALDRFVREARAVIA-STNLVDEHLIELVTPKPNIPADLAF-PTFRAAKEAGIAPPQLAQR 61

Query: 68  IVAR--IKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           IV +  +     + SV   G  F+N  L  P     +L  +   G  YG +  G G  + 
Sbjct: 62  IVEKAQVPAGSLIGSVEATGP-FVNFSLDAPGLAAAVLDEVERLGARYGSDDQGAGKTIV 120

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--- 181
           I++ S N    MHVGH R  ++G +L  +  F GY V  + ++ D G Q      ++   
Sbjct: 121 IDYSSPNVAKTMHVGHIRSTIIGQSLYHIFDFLGYRVIGDNHLGDWGKQFGMNIAAIVRW 180

Query: 182 -----------------FWRYQQALYNNDSDLPEGYYPGVYLKHVGK----------ELA 214
                            + RY   +  +++   E       L+              EL 
Sbjct: 181 GKPEGDDEDAIAALDKLYARYSALVKEDEALRAEAARWAKRLEQNDPEALAKREWIAELQ 240

Query: 215 DKYSSELLNFPEEKW----------LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            + +    +     W             +  + V   +K  + +   L ++ D  + E  
Sbjct: 241 ARAAQPNHDDEARAWSLKLEQGDPLARELWQWMVDLTIKANQRNYDRLGVRFDYVLGESF 300

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           +     + I + I+                     +    D    +    +  +     L
Sbjct: 301 YAPMLDALIEEAIEK--------------------RVAYRDEDGAVVVDDLAPELPTFLL 340

Query: 325 LKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            +SD    Y   DLA    +  E     +IYV+ +    + ++L A+A A+   +    +
Sbjct: 341 QRSDSGTLYHTRDLACIVYREREFHPAKIIYVVDARQELHFRQLFALARAMGYAQDIELI 400

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
            +       + G P  +S RAG+ + L  ++DE                           
Sbjct: 401 HVRFGTIFDQQGRP--LSTRAGNMVYLADLLDEAHARARAVVEQASPDLSEAEKEAIAEA 458

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VG  +V +  L++     +  D+ ++    + N   Y+QY +ARC SI R+A +     +
Sbjct: 459 VGVGAVIYNDLYQDPRRDIRLDWERML-AIEGNSAPYIQYMHARCCSILRKAAEEGIAAE 517

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                            SE  +I  LA+ P  +  A     P+ +A + Y+ A      +
Sbjct: 518 GGDAAL-------LTHPSETAVIKQLAKLPGAVREAGERYAPFVIAEWCYETARALSAFY 570

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                      ++A    L   RL+LV A A  + +GL ++G+++P  M
Sbjct: 571 RDC------SVLRAETPALRAARLRLVAATAQGLRNGLALLGIKAPERM 613


>gi|237717232|ref|ZP_04547713.1| arginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237718987|ref|ZP_04549468.1| arginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405999|ref|ZP_06082549.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647975|ref|ZP_06725526.1| arginine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806911|ref|ZP_06765736.1| arginine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443215|gb|EEO49006.1| arginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229451765|gb|EEO57556.1| arginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356874|gb|EEZ05964.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292636691|gb|EFF55158.1| arginine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294445940|gb|EFG14582.1| arginine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 605

 Score =  343 bits (880), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 125/647 (19%), Positives = 253/647 (39%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKAL-YGQEVPEKM---VQMQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I          +    
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLMQVTDAS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K++++ ++  E       
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 565 ------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 605


>gi|293368715|ref|ZP_06615320.1| arginine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292636180|gb|EFF54667.1| arginine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 605

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 125/647 (19%), Positives = 253/647 (39%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKAL-YGQEVPEKM---VQMQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I          +    
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLMQVTDAS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K++++ ++  E       
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---SEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 565 ------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 605


>gi|329936047|ref|ZP_08285847.1| arginyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304525|gb|EGG48403.1| arginyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 587

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 125/624 (20%), Positives = 233/624 (37%), Gaps = 78/624 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      S  ++ +L         +    D ++    R         N  + L++    +
Sbjct: 1   MTSVTSLSDSVQQHLSSALTAALPQAAGADPLL----RRSDRADYQANGILALAKKEKAN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGK 119
           P  +A  +V+ +     +  V ++G GF+N+ ++   + + L++         G     +
Sbjct: 57  PRELATQVVSHVVTGEVIADVEVSGPGFLNVTVADGAIVRNLAARAADPEGRLGVPRAER 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                +++   N    MHVGH R AV+GD++  L+ F+G  V R ++I D G Q   L  
Sbjct: 117 PGTTVVDYAQPNVAKEMHVGHLRSAVIGDSVVQLLEFTGESVVRRHHIGDWGTQFGMLIQ 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +     +  +       E     +   +       K +  L +  EE      K  + +
Sbjct: 177 YLDEHPGELDHEASEVSGEEAMSNLDRLY-------KAARALFDSDEE-----FKTRARR 224

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            ++ +   D   L      F+ E   +    S    +   +     V E       ++T 
Sbjct: 225 RVVDLQAGDPHTLATW-QKFVDESKIYF--FSVFDKLDMEIRDADIVGESGYNDMLAETC 281

Query: 300 QKCDMDRKQL-------LFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERG 348
           +  +     +       +F   + G D   V   + KSDG Y Y A DL+  + + +   
Sbjct: 282 RLLEESGVAVRSEGALCVFFDDVKGPDGNPVPLIVQKSDGGYGYAATDLSAIRDRVFRLK 341

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDF 407
            + ++YV+ +  S + K +   A         +    L     L  DG P K   RAG+ 
Sbjct: 342 ANTLLYVVDARQSLHFKMVFETARRAGWLGEDVTAHQLAFGTVLGADGKPFK--TRAGET 399

Query: 408 ITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           + L  ++DE                           VG  +V++  L    +    FD  
Sbjct: 400 VRLVDLLDEAVDRAAAVVREKAQDLSEAEIAERGAQVGIGAVKYADLSTSANRDYKFDLD 459

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++   + +  V Y+QYAYAR +SI R+A D+ P              E E   +E  L +
Sbjct: 460 QMVSLNGDTSV-YLQYAYARIQSILRKAGDVAP----------AAHPELELAPAERALGL 508

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           H+  +   + +A     P+KL  YLY LAS++   +           ++A +      RL
Sbjct: 509 HVDAFAEAVADAAAEYAPHKLTAYLYQLASLYTTFYDKC------PVLKAESPAQVENRL 562

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L    A  ++ G+ ++G+ +P  
Sbjct: 563 LLCDVTARTLHRGMALLGIRTPER 586


>gi|309791778|ref|ZP_07686266.1| arginyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226184|gb|EFO79924.1| arginyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 573

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 127/616 (20%), Positives = 235/616 (38%), Gaps = 80/616 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIER--PRDCAHGHLSTNAAMILSRPLGLDPLTI 64
               L+ +  E+   I    ++    +IE   P+      L+       ++ LGL P  +
Sbjct: 1   MKYTLERFTAEVRSVIAATGRVAPE-LIETATPKPNIPADLAFPV-FRAAKALGLPPPQL 58

Query: 65  AELIVAR--IKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT 121
           A  + A   +  D  + +V  AG  F+N  L P  L + +L+ I   G  YG +  G G 
Sbjct: 59  ANELAASITLAPDSLIGAVSAAGP-FLNFSLHPQRLAEAVLAEIAQQGAAYGTHSDGTGQ 117

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +++ + N    MHVGH R  ++G +L ++    GY V  + ++ D G Q   +  ++
Sbjct: 118 MIVVDYSAPNIAKRMHVGHIRSTIIGQSLVNIFRALGYTVVGDNHLGDWGKQFGVVLAAI 177

Query: 182 FWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
               + A+    +    +     Y          + A ++ S  L   + +   +   + 
Sbjct: 178 ELYGRPAVEGEAALEALEAQYARYAAAAKDQPDLDEAARHWSLRLEQGDPQARELW-QWC 236

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   M+  + +   L +  D    E  +    P  I + +D          G+    +  
Sbjct: 237 VDLTMRAAQRNYDRLGVHIDHAYGESFYEHMLPGVIAEALDK---------GVAQREEGG 287

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
                D+++                 L +SDG   Y   DLA    + +      +IYV+
Sbjct: 288 AVVITDLEKLPTFL------------LQRSDGGTLYMTRDLATVLFRLDEFSPTRIIYVI 335

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G   + ++++L A+  A+   +    V +         G P  +S R G+ + L  ++DE
Sbjct: 336 GEPQALHLRQLFALTRAMGHAREIDLVHVAFGTVFDASGQP--LSTRRGNMVYLESLLDE 393

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      VG  +V +  L++     +  D+ ++   ++ N
Sbjct: 394 AVARALAVVEQKSPDLPAEEKQAVAEAVGVGAVVYNDLYQDTKRNITLDWDRML-ATEGN 452

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QY++ARC SI R+      DL                  SE++LI HLA  P  +
Sbjct: 453 SATYLQYSHARCGSILRRGAADGHDL---------AHVALLTHPSEVRLIKHLARLPDAL 503

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             A     P+ +A + Y  A  F   +           ++A   +L   RL LV A A  
Sbjct: 504 REAGSRYAPFVIADWCYTTAREFGVFFEQC------PVLKAEQVELRSARLALVAATARA 557

Query: 570 INSGLNIIGVESPNEM 585
           +  GL ++G+++P  M
Sbjct: 558 LKVGLGLLGIQAPERM 573


>gi|284034982|ref|YP_003384912.1| arginyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283814275|gb|ADB36113.1| arginyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 599

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 126/641 (19%), Positives = 239/641 (37%), Gaps = 104/641 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S ++  +     +  +       + +   +    G  +       ++ L   P  I 
Sbjct: 2   DTQSIVQADITRAIAE--LYPGSAGEVQLSPTKKEFEGQYTF-VTFPYTKILRQAPAQIG 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I   +  +  V S F   +GF+N+ L+ +   ++L+ +          L  KG  V +
Sbjct: 59  QAIGNWLVENSPVVSKFNVVQGFLNISLADAAWVEVLNDMATDASFG--TLPSKGQSVMV 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-- 183
           EF S N   P+H+GH R   +GD+++ ++  +GY+V +   +ND G  I    L+     
Sbjct: 117 EFSSPNTNKPLHLGHLRNNFLGDSVSRILVANGYDVVKTCIVNDRGVHICKSMLAYRMFG 176

Query: 184 --RYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK--- 234
                Q      S L   +  G Y     K    ++ +  +        EK  P+++   
Sbjct: 177 SDASGQWETPETSGLKGDHLIGKYYVLFDKAYKAQVEEMVAQGTTKEVAEKTAPLMQEVQ 236

Query: 235 ---------DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                    D    A+ K + +          K++ +  D    E + +       ++I+
Sbjct: 237 QMLRLWEQGDPETVALWKKLNNWVYAGFDVTYKSIGVSFDKTYYESNTYLLG----KEIV 292

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           +   ++G  Y                 D   +    T  G D  + +L+ DG+  Y   D
Sbjct: 293 EEGIQKGVFYRK---------------DDGSVWIDLTEEGLD-QKLVLRGDGTSVYITQD 336

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDG 395
           L     K++  G D  I+V+G++   +   L A+   +    A  +  L   +V L    
Sbjct: 337 LGTTDLKFQDFGSDRQIWVVGNEQDYHFNVLFAILRRLGRPYANGLYHLSYGMVDLPTG- 395

Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRF 424
              KM  R G  +    ++ E                               +G  ++++
Sbjct: 396 ---KMKSREGTVVDADDLIQETTDAASNAADEAAKGKLDEFSDEEKKALFQMLGLGALKY 452

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + F+  +  +    N   Y+QY +AR +SI R+A +    LD  +     
Sbjct: 453 YLLKVDPQKRMQFNPAESVDL-HGNTGPYIQYVHARIQSILRKAAETGVTLDGTVMATG- 510

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D  E QLI+ L++YP+ I  A     P  +A Y YDLA +F+  +       +
Sbjct: 511 ------LDDVEQQLILLLSQYPQRIAEAGATYAPSYIAQYAYDLAKIFNQFYD------K 558

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  ++  +      RL L   V   I   + ++G+E P++M
Sbjct: 559 LSILKETDSVKLHSRLVLSKLVGETIRKAMGLLGIEVPSKM 599


>gi|50553350|ref|XP_504086.1| YALI0E17985p [Yarrowia lipolytica]
 gi|49649955|emb|CAG79679.1| YALI0E17985p [Yarrowia lipolytica]
          Length = 647

 Score =  343 bits (879), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 134/631 (21%), Positives = 235/631 (37%), Gaps = 96/631 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F  + ++    L ++D ++           +E       G L      +  R  G++
Sbjct: 67  MDVFRSYITKELAALSKVDPELIYPA-------LEWTSTSDKGDLVIPLPRL--RMKGVN 117

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGK 119
           P  +A    ++      +  V   G  F+  + SP  L  I +  I+   +EYG + +GK
Sbjct: 118 PQELAVEWASKFPKGEYLKEVKAMGP-FMQFFFSPKLLYNIVIKDILERKLEYGSSDVGK 176

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KV IEF S N   P H GH R  ++G  L++L    G+EV R  Y+ D G Q   LA+
Sbjct: 177 GKKVVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLHEKLGWEVIRLNYLGDWGKQFGVLAV 236

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--------EKWLP 231
             F RY           P  +   VY++      A+K +S+     E         ++  
Sbjct: 237 G-FERY--GSEEQLVTDPIQHLFEVYVRINKDMEAEKEASKEATGEESSATDDKAREYFR 293

Query: 232 IVKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            ++D   +A+          ++  +D    LNI +D +  E           +D+     
Sbjct: 294 KMEDGDKEALALWSRFRDLSIERYKDTYARLNIHYDSYSGESQVPEEFMKMAKDLF---V 350

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAY 340
            +G V+E                DR   L   T     + + ++ K DG+  Y   D+  
Sbjct: 351 EKGLVHE----------------DRGAKLIDLTKFNKKLGKVIVEKKDGTSLYITRDVGG 394

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------I 381
              + E+  FD MIYV+ S    + ++   +                             
Sbjct: 395 AIARMEKYKFDKMIYVIASQQDLHCQQFFRILKECGFDWVDRLQHVNFGLVQGMSTRKGT 454

Query: 382 NVLLCELVRLYRDGMPIKMSKRA---GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
            V L  ++   ++ M   M K             + D VG  SV    +  K      FD
Sbjct: 455 VVFLSNILEEVKESMHNVMKKNEVKYNQVENPEEIADLVGISSVMIQDMSAKRVNNYKFD 514

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTS 494
           + ++    + +   Y+QYA++R RS+ R++     +     DF L    +          
Sbjct: 515 WDRMLSF-EGDTGPYLQYAHSRLRSVERKSGMTIDENLASADFSLLTEPIAD-------- 565

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
             +LI  L ++P V+ NA   QEP  +  YL+ L       +        + +V      
Sbjct: 566 --ELIRTLTQFPDVVLNAGKTQEPATIVTYLFKLTHQVSSCYD-------VLWVAGQEEA 616

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   RL L  +   ++ +G+ ++G+   + M
Sbjct: 617 LAKARLSLYSSARQVLYNGMVLLGLTPVDRM 647


>gi|325957848|ref|YP_004289314.1| arginyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329280|gb|ADZ08342.1| Arginyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 561

 Score =  343 bits (879), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 141/614 (22%), Positives = 252/614 (41%), Gaps = 84/614 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           ++    S   N L E    +  E  I D I +E P +   G ++++ +  L++ L   P+
Sbjct: 1   MYRILISESINALSEAIKSLGWE--IPDEIKVEEPPNPELGDVASSVSFQLAKELKRSPM 58

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            I + I+  +KI      V   G  +IN Y + +    ++ + +         L    TK
Sbjct: 59  EITQEILKALKIPDIFSKVESKGP-YINFYANYNEFSSLVLNSITED---YGKLESNNTK 114

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181
           + +E  SANP GP+H+GH R +++GD+LA ++  +GYEV  +YY+ND G QI  +   + 
Sbjct: 115 IILEHTSANPNGPLHIGHIRNSIIGDSLARVLKSAGYEVETQYYVNDMGRQIAMIVWGLL 174

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSV 238
                       D ++ + Y+          E+ D+ S+ L  +   ++  L  + +  V
Sbjct: 175 NLDYNMDPFGKPDHEIGKLYFNVNEKLRANPEIKDEVSALLKRYERGDDPELEKMFEGVV 234

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  ++ I    K LN+ HD FI E  F +     + +I+ +L                + 
Sbjct: 235 KNCLEGISTTSKRLNVNHDAFIWESRFIKN--GSVANILKSLDEY------------IQK 280

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +   MD           G + +  L++SDG+  Y   DLAY K K E G D  I ++GS
Sbjct: 281 NEVVYMDL-------NSYGIEKELILIRSDGTSLYATRDLAYHKEKSE-GSDRYIDILGS 332

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH   + +L+     +  K      +  E + L        MS R G FI++  +++E  
Sbjct: 333 DHKLAIDQLKVPLELLGAKAP--ETIFYEFITLPEG----SMSTRRGVFISVDELMNEAV 386

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  ++R+ +      + + F + +     +    
Sbjct: 387 SRAMIEIEKRRTDLGESERLKIAEIVGIGAIRYYIARLSPEKHIVFKWDEALSFERG--C 444

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +QYA+AR   +   A      L  D F  +        D  E++L+  ++++   IE 
Sbjct: 445 ASIQYAHARACKLLENANYDRNSLKIDNFDLD--------DKIEIELVKLMSKFSAAIEE 496

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           +      + +A Y  DLA  F+  +        L  + +    L   RL +V      I 
Sbjct: 497 SARINRVHNIAQYSLDLAGGFNKFY------KALPVIDSEKEDL---RLLIVDKFRITIR 547

Query: 572 SGLNIIGVESPNEM 585
           + L +IG+E+P  M
Sbjct: 548 NSLELIGIEAPESM 561


>gi|187453153|emb|CAQ34913.1| arginyl-tRNA synthetase [Canavalia ensiformis]
          Length = 595

 Score =  343 bits (879), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 118/590 (20%), Positives = 221/590 (37%), Gaps = 92/590 (15%)

Query: 41  AHGHLSTNAAMIL-SRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
                  N AM L ++  G       P  + + IVA +     ++S  IAG GF+N+ LS
Sbjct: 47  KFADYQCNNAMSLWAKIKGKQTGFRGPPALGQAIVANLPQSEMIESCSIAGPGFVNIVLS 106

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             ++ + L  +++ GI+     +     V ++F S N    MHVGH R  ++GDTLA ++
Sbjct: 107 KKWIAQRLEMMLIDGIDTWAPRL-PVKVVMVDFSSPNIAKEMHVGHLRSTIIGDTLARML 165

Query: 155 AFSGYEV-TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE--GYYPGVYLKHVGK 211
            F+  E   R  ++ D G Q   L   +F  Y      N++ + +   +Y    ++    
Sbjct: 166 EFACVETLIRRNHLGDWGTQFGMLIAHLFDMYPNPEDVNETAIGDLQAFYKASKVRFDND 225

Query: 212 ELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                 + +   LL   ++K+    +     +  +  +   K L ++ +  + E  F+  
Sbjct: 226 PEFKLRAQQSVVLLQSGDKKYRKAWERICDVSKAEFEKV-YKRLGVRVEA-MGESFFN-- 281

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I   ++ L + G +                D D  +++F   + G ++    +K D
Sbjct: 282 --DLIPPTLEKLDKLGLI---------------EDSDGARVIF---VEGVNIPIIAVKRD 321

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN----- 382
           G Y YF++DLA    +      +  IYV       +   L              N     
Sbjct: 322 GGYNYFSSDLASLWYRLNVEKLEWNIYVTDVGQWQHFDMLFKAFRRAGWLPKDENDFPKC 381

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
             +   + L  DG   +   R+ + + L  ++DE                          
Sbjct: 382 THIGFGLVLGEDGK--RFRSRSSETVRLVDLLDEAKRRCKSALLERDAAKDWSEEEIEKT 439

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              +G  +V++  L         F+F ++    K N   Y+ YA+AR  SI R++     
Sbjct: 440 SEAIGYGAVKYADLKINRLTNYTFNFDQMLN-DKGNTAVYLLYAHARICSIIRKSGKDIE 498

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           +L  +                E  L +HL ++P V   +     P  L  YLY+L  +F 
Sbjct: 499 ELKKN-------GNIVLNHEDERALGLHLIQFPEVFVESLANLLPNVLCEYLYNLTEIFT 551

Query: 534 -GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
              +++ +       V  +       RL L  A A+++     ++G++  
Sbjct: 552 KKFYTNCQ-------VIGSPE--QTSRLLLCEATATVMRKCFYLLGIDPV 592


>gi|190346605|gb|EDK38731.2| hypothetical protein PGUG_02829 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 632

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 133/618 (21%), Positives = 234/618 (37%), Gaps = 79/618 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+    ++NY+ +   ++    K +    ++ P     G L      +  R  G++P   
Sbjct: 57  ANAVDLMRNYITDELHRLSSIDKSIIYPALDTPSTLDKGDLIVPLPRL--RLKGVNPKEK 114

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKV 123
           A    A  +    +  V   G  F+  + S S L  + +   +    EYG   +GKG KV
Sbjct: 115 AVEWAAAFEKGKLLSEVKAEGP-FLQFFFSTSVLFNVVIKDSLTRTTEYGALPLGKGKKV 173

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF S N   P H GH R  ++G  L+ L    G+EV++  Y+ D G Q   LA+  F 
Sbjct: 174 VIEFSSPNIAKPFHAGHLRSTIIGGFLSKLYEKEGWEVSKLNYLGDWGKQFGLLAIG-FQ 232

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK---HVGKE----------LADKYSSELLNFPEEKWL 230
           RY           P  +   VY++    V  E           A  Y   + +  EE  L
Sbjct: 233 RY--GSEEELVKNPINHLFEVYVRINQDVAAEGPDAVGGVNDQAKHYFKRMEDGDEEA-L 289

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + + +   ++ K I D    LNI +D +  E    +     +++++     +G ++E  
Sbjct: 290 VLWRRFRDYSIEKYI-DTYARLNIVYDKYAGESLVSK---QKMKEVVQIFNEKGLIHE-- 343

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-G 348
                         D+   L   T     + + L+ KSDG+  Y   D+     +YE   
Sbjct: 344 --------------DKGAKLIDLTKFNKKLGKTLVEKSDGTSIYLTRDVGEAIARYETYK 389

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVR 390
           FD MIYV+ S    +  +   +   +  + A                     V L  ++ 
Sbjct: 390 FDKMIYVIASQQDLHTAQFFEILKQMGFEWANRLEHVNFGMVLGMSTRKGTVVFLDNILE 449

Query: 391 LYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
             ++ M   M K    +  +     V D VG  +V    +  K     +F + ++    +
Sbjct: 450 ETKEKMHEVMKKNEDKYAQIEDPEKVADLVGISAVMIQDMQSKRINNYEFKWDRMTSF-E 508

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+QYA++R  S+ R++      L                +     LI  LA+YP 
Sbjct: 509 GDTGPYLQYAHSRLSSVQRKSGIPNEKLTEADLSL-------LTEPCAGNLIRILAQYPD 561

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++  A    EP  +  YL++L  V    +        + +V     KL   RL L  +  
Sbjct: 562 ILRRAMTTHEPSTIVTYLFNLTHVVSQCYD-------ILWVAGQEEKLATARLALYASAK 614

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +G+ ++G+     M
Sbjct: 615 QVLYNGMTLLGLTPVERM 632


>gi|156741625|ref|YP_001431754.1| arginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156232953|gb|ABU57736.1| arginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 640

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/626 (19%), Positives = 224/626 (35%), Gaps = 111/626 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA--RIKIDPDVDSVFIAGKGFI 89
           I +  P+      L+       ++  G+ P  +A+ I           + S+   G  F+
Sbjct: 54  IELVTPKPNIPADLAF-PTFRAAKEAGVTPPHLAQRIAEKAHAPHGSLIGSIVATGP-FV 111

Query: 90  NLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N  L  + L   +   V   G  YG +  G G  + I++ S N    MHVGH R  ++G 
Sbjct: 112 NFSLDAARLAAAVLDEVERLGARYGSDDQGAGKTIVIDYSSPNVAKTMHVGHIRSTIIGQ 171

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINT-LALSVFWRYQQALYNNDSDLPEGYYPG---- 203
           +L  +  F GY V  + ++ D G Q    +A  V W   +    +     +  Y      
Sbjct: 172 SLYHIFDFLGYRVIGDNHLGDWGKQFGMNIAAIVRWGKPEGDDEDAIAALDKLYARYSAL 231

Query: 204 ----VYLKHVGKELADK-YSSELLNFPEEKWLP--------------------------- 231
               V L+    E A +   ++     +  W+                            
Sbjct: 232 VKEDVALREEAAEWAKRLERNDPEALAKRAWIAELQARAAQPNHDDEARAWSLKLEQGDP 291

Query: 232 ---IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
               +  + V   +K  + +   L ++ D  + E  +       I++ ID    +G  Y 
Sbjct: 292 LARELWQWMVDLTLKANQRNYDRLGVRFDYTLGESFYAPMLDGLIQEAID----KGVAYR 347

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                           +   ++      G      L +SD    Y   DLA    + ER 
Sbjct: 348 D---------------EDGAVVVDELAPGLP-TFLLRRSDSGTLYHTRDLACIVYR-ERE 390

Query: 349 F--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           F    +IYV+ S    + ++L A+A A+   +    + +       + G P  +S RAG+
Sbjct: 391 FRPAKIIYVVDSRQELHFRQLFALARAMGYAQETELIHVKFGTIFDQQGRP--LSTRAGN 448

Query: 407 FITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            + L  ++DE                           VG  +V +  L++     +  D+
Sbjct: 449 MVYLADLLDEAHARARAVVDQASPELPEVEKEAIAEAVGVGAVVYNDLYQDPRRDIRLDW 508

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++    + N   Y+QY +ARC SI R+A D   D +                 +E  +I
Sbjct: 509 ERML-AIEGNSAPYIQYMHARCCSILRKAADEGVDAEQGDAAL-------LTHPAETAVI 560

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA+ P  +  A     P+ +A + Y+ A      +           ++A    L   R
Sbjct: 561 KQLAKLPGAVREAGERYAPFVIAEWCYETARALSAFYRDC------SVLKAETPALRTAR 614

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+LV A A  + +GL ++G+++P  M
Sbjct: 615 LRLVAATAQALRNGLALLGIKAPERM 640


>gi|159116602|ref|XP_001708522.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157436634|gb|EDO80848.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 621

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 113/611 (18%), Positives = 221/611 (36%), Gaps = 76/611 (12%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLG--------LDPLTIAELI---------- 68
            +    ++    +  +GH   N+ M +++ +          +P  ++ L           
Sbjct: 35  GVFTSPLVTPTTNIKYGHYQFNSTMGIAKLIKDLHYDALPSNPAELSGLFTQAMLCVQDK 94

Query: 69  -VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNI 125
                     +++V IAG  FIN+ L+P+YL      I ++       +       +V +
Sbjct: 95  YAEEKGCPKPIEAVNIAG-CFINIALTPAYLLSKCFDIYMAVPFGTLPKPPTLPRKRVVV 153

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F S N    MHVGH R  ++GD++  L  + GY+V R  ++ D G Q   L   +   +
Sbjct: 154 DFSSPNVAKSMHVGHLRSTIIGDSICRLYEYVGYDVHRINHVGDWGTQFGMLITHLTDMH 213

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKI 244
                      PE      + + +     D   +      E     P  +  + +A++K+
Sbjct: 214 -----------PEIADAAAHCRRITMLPIDNLVAFYKAAKERFDNDPAFQKRAYEAVVKL 262

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R +L    +   I        +     +   ID      Y ++      + K      M
Sbjct: 263 QRLNLAEFYLWCKICDISRHEFQRIYDRLDIKIDEFGESSYKFKLGTTVARLKRLHLTQM 322

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
             K  +    + G D    ++KSDG +TY   D+A    + +    D  +YV+ +  S +
Sbjct: 323 SDKATVIP--IEGMDYPLIIVKSDGGFTYDTTDMAAIYHRTQVLHADKCVYVVDAGQSSH 380

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
              +   A           V +   V L  DG   ++  RAG+ + L  ++DE       
Sbjct: 381 FDLVFKAAEKAGWITKDQAVHVPFGVVLGSDGK--RLKTRAGETVKLEDLLDEAVTESMR 438

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  +V++  L     +   +D  ++    K N   Y+
Sbjct: 439 LLEERNRDQEFSQEEMRQVAEAVGYGAVKYADLSSHRIKDYKYDPKRMLNL-KGNTAAYL 497

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
            Y++ R  SI R+A     +    L+  + +   S  + SE+ L+V L +    I     
Sbjct: 498 LYSFTRISSICRKAGIDREE----LYTSDTLRNLSITEPSEINLLVALLKVRDTILFTLE 553

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P+++  ++Y +AS +   +   R    +    + +      RL L       +    
Sbjct: 554 DLCPHRICDWVYSVASAYTDFYEKCR---VIETSASGDSVCNKSRLVLCEMARQSLRLAF 610

Query: 575 NIIGVESPNEM 585
           +++G+   + M
Sbjct: 611 HLLGIREIDRM 621


>gi|221504188|gb|EEE29863.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 607

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 118/622 (18%), Positives = 227/622 (36%), Gaps = 124/622 (19%)

Query: 40  CAHGHLSTNAAMILSRPLGL------DPLTIAELIVARIKIDPDVDSVFIAGK------- 86
              G    N+AM L +           P    E I A++K +    +V  + +       
Sbjct: 32  SKFGDFQCNSAMALFKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQASLLNRD 91

Query: 87  -----GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                GF+ + +S ++L K L  I+            K  +V ++F S N    MHVGH 
Sbjct: 92  EPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPQAEKKLRVMVDFSSPNVAKEMHVGHL 151

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEG 199
           R  ++G+++  ++AF G+EV R  +I D G Q   L   +  ++   +A   + SDL   
Sbjct: 152 RSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAF 211

Query: 200 YYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y          ++   +    ++     +E  L   +      +  + R + + +  + D
Sbjct: 212 YKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWR-----LICDVSRKEFEKVYKRLD 266

Query: 258 IFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           + + E    ++    + +  ++  L  +G V                  D  + +F    
Sbjct: 267 VSLEERGESYYN---AVLPKVVQELTDKGMV---------------TVSDGAKCVFTKVS 308

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              +V    +KSDG + Y + DLA  + +  ER  D +IYV       +  ++ A A   
Sbjct: 309 ---EVPLMAVKSDGGFGYDSTDLAAVRDRLVERRGDWLIYVTDLGQEEHFTKIFAAAEQA 365

Query: 375 SE---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
                 K +++ +    V   +DG   +   R+G+ + L  ++DE               
Sbjct: 366 GWHLPPKTRLDHM-GFGVVQGQDGK--RFKTRSGEVVKLVDLLDEAKARALKELRRRKEE 422

Query: 417 ----------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
                                             +G  +V++  L +       F + ++
Sbjct: 423 EKEEEKRESGDGCNASPCTGTTVADEEMDNAAEAIGYSAVKYFDLKQNRHTDYKFSYDRM 482

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +  K N   Y+ YAYAR  +IFR+A     D+D        +  E   + +E +L V L
Sbjct: 483 LD-PKGNTAVYMMYAYARICAIFRKA-----DVDISTLDPEELKIE---EPAERKLAVTL 533

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P V+         ++LA Y+Y ++  F   +   +                  RL L
Sbjct: 534 AQFPDVLATILDDLHIHRLAEYMYKVSGAFTDFYQACKVLGS---------PQQNTRLLL 584

Query: 563 VHAVASIINSGLNIIGVESPNE 584
             A   ++ +   ++G+     
Sbjct: 585 CEATRKVLQASFYLLGITPLER 606


>gi|298480089|ref|ZP_06998288.1| arginine--tRNA ligase [Bacteroides sp. D22]
 gi|298273898|gb|EFI15460.1| arginine--tRNA ligase [Bacteroides sp. D22]
          Length = 605

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/647 (19%), Positives = 253/647 (39%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKAL-YGQEVPEKM---VQMQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I          +    
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLMQVTDAS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K++++ ++  E       
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVGFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---SEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 565 ------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 605


>gi|237843883|ref|XP_002371239.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968903|gb|EEB04099.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221483811|gb|EEE22123.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 607

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 118/622 (18%), Positives = 227/622 (36%), Gaps = 124/622 (19%)

Query: 40  CAHGHLSTNAAMILSRPLGL------DPLTIAELIVARIKIDPDVDSVFIAGK------- 86
              G    N+AM L +           P    E I A++K +    +V  + +       
Sbjct: 32  SKFGDFQCNSAMALFKQKSKEELGVQSPKEAGEKIAAQLKDESLFSNVQASPQASLLNRD 91

Query: 87  -----GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
                GF+ + +S ++L K L  I+            K  +V ++F S N    MHVGH 
Sbjct: 92  EPVLAGFVTVDISGAWLCKDLKEILKQKGHLQVPHAEKKLRVMVDFSSPNVAKEMHVGHL 151

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEG 199
           R  ++G+++  ++AF G+EV R  +I D G Q   L   +  ++   +A   + SDL   
Sbjct: 152 RSTIIGESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAF 211

Query: 200 YYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y          ++   +    ++     +E  L   +      +  + R + + +  + D
Sbjct: 212 YKKAKAAFDADEDFKTRSREMVVKLQGGDEAALESWR-----LICDVSRKEFEKVYKRLD 266

Query: 258 IFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           + + E    ++    + +  ++  L  +G V                  D  + +F    
Sbjct: 267 VSLEERGESYYN---AVLPKVVQELTDKGMV---------------TVSDGAKCVFTKVS 308

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
              +V    +KSDG + Y + DLA  + +  ER  D +IYV       +  ++ A A   
Sbjct: 309 ---EVPLMAVKSDGGFGYDSTDLAAVRDRLVERRGDWLIYVTDLGQEEHFTKIFAAAEQA 365

Query: 375 SE---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
                 K +++ +    V   +DG   +   R+G+ + L  ++DE               
Sbjct: 366 GWHLPPKTRLDHM-GFGVVQGQDGK--RFKTRSGEVVKLVDLLDEAKARALKELRRRKEE 422

Query: 417 ----------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
                                             +G  +V++  L +       F + ++
Sbjct: 423 EKEEEKRESGDGCNASPCTGTTVADEEMDNAAEAIGYSAVKYFDLKQNRHTDYKFSYDRM 482

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +  K N   Y+ YAYAR  +IFR+A     D+D        +  E   + +E +L V L
Sbjct: 483 LD-PKGNTAVYMMYAYARICAIFRKA-----DVDISTLDPEELKIE---EPAERKLAVTL 533

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P V+         ++LA Y+Y ++  F   +   +                  RL L
Sbjct: 534 AQFPDVLATILDDLHIHRLAEYMYKVSGAFTDFYQACKVLGS---------PQQNTRLLL 584

Query: 563 VHAVASIINSGLNIIGVESPNE 584
             A   ++ +   ++G+     
Sbjct: 585 CEATRKVLQASFYLLGITPLER 606


>gi|146418269|ref|XP_001485100.1| hypothetical protein PGUG_02829 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 632

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 133/618 (21%), Positives = 234/618 (37%), Gaps = 79/618 (12%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+    ++NY+ +   ++    K +    ++ P     G L      +  R  G++P   
Sbjct: 57  ANAVDLMRNYITDELHRLSSIDKSIIYPALDTPSTLDKGDLIVPLPRL--RLKGVNPKEK 114

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKV 123
           A    A  +    +  V   G  F+  + S S L  + +   +    EYG   +GKG KV
Sbjct: 115 AVEWAAAFEKGKLLSEVKAEGP-FLQFFFSTSVLFNVVIKDSLTRTTEYGALPLGKGKKV 173

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF S N   P H GH R  ++G  L+ L    G+EV++  Y+ D G Q   LA+  F 
Sbjct: 174 VIEFSSPNIAKPFHAGHLRSTIIGGFLSKLYEKEGWEVSKLNYLGDWGKQFGLLAIG-FQ 232

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK---HVGKE----------LADKYSSELLNFPEEKWL 230
           RY           P  +   VY++    V  E           A  Y   + +  EE  L
Sbjct: 233 RY--GSEEELVKNPINHLFEVYVRINQDVAAEGPDAVGGVNDQAKHYFKRMEDGDEEA-L 289

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + + +   ++ K I D    LNI +D +  E    +     +++++     +G ++E  
Sbjct: 290 VLWRRFRDYSIEKYI-DTYARLNIVYDKYAGESLVSK---QKMKEVVQIFNEKGLIHE-- 343

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-G 348
                         D+   L   T     + + L+ KSDG+  Y   D+     +YE   
Sbjct: 344 --------------DKGAKLIDLTKFNKKLGKTLVEKSDGTSIYLTRDVGEAIARYETYK 389

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVR 390
           FD MIYV+ S    +  +   +   +  + A                     V L  ++ 
Sbjct: 390 FDKMIYVIASQQDLHTAQFFEILKQMGFEWANRLEHVNFGMVLGMSTRKGTVVFLDNILE 449

Query: 391 LYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
             ++ M   M K    +  +     V D VG  +V    +  K     +F + ++    +
Sbjct: 450 ETKEKMHEVMKKNEDKYAQIEDPEKVADLVGISAVMIQDMQSKRINNYEFKWDRMTSF-E 508

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+QYA++R  S+ R++      L                +     LI  LA+YP 
Sbjct: 509 GDTGPYLQYAHSRLSSVQRKSGIPNEKLTEADLSL-------LTEPCAGNLIRILAQYPD 561

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++  A    EP  +  YL++L  V    +        + +V     KL   RL L  +  
Sbjct: 562 ILRRAMTTHEPSTIVTYLFNLTHVVSQCYD-------ILWVAGQEEKLATARLALYASAK 614

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +G+ ++G+     M
Sbjct: 615 QVLYNGMTLLGLTPVERM 632


>gi|282859911|ref|ZP_06268999.1| arginine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587314|gb|EFB92531.1| arginine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 606

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 118/642 (18%), Positives = 245/642 (38%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++         ++   +     + +++ R    G+L T     L +    +P    E
Sbjct: 3   IEDQITAAALAAIKELYGTEVPESMVQLQKTRANFEGNL-TLVTFPLLKTSKKNPEQTGE 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    + +   KGF+NL ++P+    +L+ I        + +        +E
Sbjct: 62  EIGKYLVENCRAIAAYNVVKGFLNLVIAPAAWVGLLNDINTDEHFGEKAVTDNSPLAMVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +GY+V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLSQIMEANGYKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYL----KHVGKELA---DKYSSELLNFPEEKWLP-------- 231
           + +    +     +  G +     KH   EL    DK+ +E L+  E K           
Sbjct: 181 EGITPEKAGKKGDHLIGDFYVAFDKHYRAELKEMTDKFMAEGLSEDEAKAKAEKESPLMQ 240

Query: 232 -----IVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                +VK    D  V+A+ + +         +  KAL +  D    E + +      + 
Sbjct: 241 EAHDMLVKWEANDPDVRALWEKMNSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +     +G                    D   +    T  G D  + LL++DG+  Y 
Sbjct: 301 EGL----EKGLF---------------IRKDDNSVWADLTDEGLD-QKLLLRADGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   + ++ +   D MIYV+G++ + + + L  +   +  +  +  V     +    
Sbjct: 341 TQDIGTAQMRFADYPIDKMIYVVGNEQNYHFQVLSILLDRLGFRWGKDLVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVV------------------------------DEVGSDSVR 423
           +G   KM  R G  +    +V                                VG  +++
Sbjct: 401 NG---KMKSREGTVVDADDLVASMIENAKTLSEDKVNKLEGITEEEKNEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A+        ++    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAQ------NIVLPT 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++  ++  +  E++L+  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 511 LLADDAPLNEKEIELVQKLNDFGAAVAQAGIDYSPSGIANYCYELTKQFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL +   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILGADTEAEKITRLVIAKNVAKVIKNGMALLGIEVPERM 606


>gi|160884101|ref|ZP_02065104.1| hypothetical protein BACOVA_02077 [Bacteroides ovatus ATCC 8483]
 gi|156110443|gb|EDO12188.1| hypothetical protein BACOVA_02077 [Bacteroides ovatus ATCC 8483]
          Length = 605

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/647 (19%), Positives = 253/647 (39%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKAL-YGQEVPEKM---VQMQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I          +    
Sbjct: 56  PEQTAQEIGGYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLMQVTDAS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE------- 226
            + +Y        S     +  G Y        K   KEL  K++++ ++  E       
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDEAKAKAEA 234

Query: 227 ------EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                 E    +VK    D  V+ + +++         +  K + +  D    E + +  
Sbjct: 235 ESPLMQEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVSFDKIYYESNTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                ++ +     +G+ Y+                +   +    T  G D  + LL+ D
Sbjct: 295 G----KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGD 334

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V    
Sbjct: 335 GTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    +++E                             VG
Sbjct: 395 GMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  K       N   ++QY YAR +S+ R+A +    +   
Sbjct: 452 LGALKYFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                 IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +  
Sbjct: 508 ---PEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 565 ------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 605


>gi|159900648|ref|YP_001546895.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893687|gb|ABX06767.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 591

 Score =  341 bits (876), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 130/641 (20%), Positives = 240/641 (37%), Gaps = 106/641 (16%)

Query: 1   MYLFADFSSRLKNYL--KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           MY FA F   ++  L    +     ++        ++         L+       ++  G
Sbjct: 1   MYTFARFEQAIREALLATNLISAADIDLGAPKAAGVQ-------ADLAL-PCFRAAKSRG 52

Query: 59  LDPLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRN 115
             P  +A+ +VA ++   D  V S  I+G  ++N  L+P  + + +L+ I   G  YG +
Sbjct: 53  STPAQVAQELVAALQFAPDSLVASATISGP-YVNFNLNPQTFAKAVLADIQAGGATYGSS 111

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
             G   KV +E+ S N    MHVGH R  ++G  +A+L    GYEV R+ ++ D G Q  
Sbjct: 112 TKGNNRKVIVEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRDNHLGDYGKQFG 171

Query: 176 TLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKW 229
            + ++   R+ +     +   + + E Y     L         +Y       L+     W
Sbjct: 172 -VNIAATLRFGKPEGEGEAVLAAIEEQYKRYNLLMKGAVAEDTEYDPDSDAGLDDEARAW 230

Query: 230 LPIVKDYSVQA--MMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              ++    QA  + + + D        +   L +  D+   E  +       I D    
Sbjct: 231 SLKLEQGDPQAVEIWQWMVDLTKTANQPNYDRLGVHFDLQHGESFYKDMLAEIISDA--- 287

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336
                              ++  + D   ++ +          P   + +SDG   Y   
Sbjct: 288 -----------------GESELAERDGNAIIVKDLPDHRGKKLPTFLIQRSDGGTLYMTR 330

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+A  K + +    D MIY++G     + ++  A++ A+    A++  +    V    D 
Sbjct: 331 DIATIKYREQTYNPDAMIYIVGQPQELHFRQTFAISKALGYTDAELIHISFGTV---FDA 387

Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRF 424
               +S R G+ I L  ++DE                               VG  +V +
Sbjct: 388 KGQPLSTRKGNMIYLETLLDEARNRAKALIEQKMAEGKTQLTAELIDQVAEQVGVGAVMY 447

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             L++     +  D+ ++    + N   Y+QY +ARC SI R    +    D  L   + 
Sbjct: 448 NDLYQDTKRNITVDWDRML-AFEGNSSPYLQYMHARCCSILRDFGKLPASYDGSLLSHS- 505

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                    +E  L+  LA  P++IE A     P+ +A +LY  A  F   +        
Sbjct: 506 ---------AETGLLKELARLPQIIEEAAARYAPFVVADWLYATARAFSAFYDAC----- 551

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++A   +L + R  +V A A  + +GL ++ + +P  M
Sbjct: 552 -SVLKAETPELRVARGHVVAATAQALRNGLALLSIAAPERM 591


>gi|42526483|ref|NP_971581.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81412594|sp|Q73P28|SYR_TREDE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|41816676|gb|AAS11462.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 590

 Score =  341 bits (876), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 113/627 (18%), Positives = 238/627 (37%), Gaps = 82/627 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
             D  +  +  + +    I  E   K + ++I IE P +   G ++       ++     
Sbjct: 1   MEDIKTTWQKIIADTLNGIAPETCDKILPEQINIETPPNPEMGDVAFPL-FTFAKSFKSS 59

Query: 61  PLTIAELIVARIKIDPDVDSVFI--AGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLI 117
           P  IA  + AR+  + D+    +  A   ++N++L+   L    L  ++     YG+   
Sbjct: 60  PAKIASDVCARLLENEDIKKYGMPKAIGPYLNVFLAKGDLASNVLDKVLKEKENYGKTSS 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             G ++ IEF S N   P+H+GH R   +G++++ ++ F G +V +   IND G  I   
Sbjct: 120 LSGKRIMIEFSSPNTNKPLHLGHLRNDALGESISRILKFCGADVFKVNIINDRGVHICKS 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGV------YLKHVGKELADKYSSELLNFPEEKWLP 231
            ++ + ++ +       ++    + G              E A+  + ++L   E     
Sbjct: 180 MIA-YQKFGEGKTPESENIKSDRFVGDMYVAFHKYSQENPEKAEAEAKQMLLDWEAGENK 238

Query: 232 ----IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
               + K  +  A+ + I++  K   I  D    E + +      I   ++     G  Y
Sbjct: 239 ELIGLWKKMNGWAI-EGIKETYKRTGISFDKLYFESETYLKGKDQILKGLEA----GVFY 293

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           +                +   +      +  D  + LL+SDG+  Y   D+     ++ +
Sbjct: 294 K---------------EEDGSVWVDLAPIKLDK-KVLLRSDGTSLYMTQDIGTAISRHKD 337

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAG 405
             F+ MIYV+G++   + K L  V   +  + A  +  L   +V L       KM  R G
Sbjct: 338 WPFNQMIYVVGNEQEYHFKVLFYVLKQLGFEWADDLYHLSYGMVNLPEG----KMKSREG 393

Query: 406 DFITLRHVV---------------------------DEVGSDSVRFMMLWRKNSELLDFD 438
             +    ++                           + +   ++ + +L     + + F+
Sbjct: 394 TVVDADDLINSLQDEALKKIEENGREKEVGDAAVAAENIAVGALHYFLLQVSPKKDMLFN 453

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +    +  N   Y+QY  AR  SI R+A+        +      +      + SE +L
Sbjct: 454 PKESLSFT-GNTGPYLQYMGARISSILRKAETAEGK---EKLKDGKLNASLLTNESEWEL 509

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  L ++P  +E + + ++P  L  YLY+L+  F   +           +   +  L+  
Sbjct: 510 LKTLEDFPEQVERSALRKDPSALTAYLYELSKAFSRFYRDC------PILSGEDADLSYT 563

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R++L  A   ++ + +N++ +     M
Sbjct: 564 RMELARATKIVLQNAMNLVLIPFMEVM 590


>gi|219850962|ref|YP_002465394.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782973|sp|B8GJL7|SYR_METPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219545221|gb|ACL15671.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 559

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 142/615 (23%), Positives = 240/615 (39%), Gaps = 88/615 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +  + ++  LK             D   I       H  L++  A  L++     P 
Sbjct: 1   MFTETYTLIERVLKA----------CTDETEIALTDGGEHADLASTVAFALAKKRHQAPK 50

Query: 63  TIAELIVARIKIDPDVD--SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IAE +   +  +P++    V   G  ++N    P YL + L + V            K 
Sbjct: 51  VIAEELAVTLAANPELAGIRVEALGP-YLNFSFGPKYLEETLKAAVQDN---FGTAPTKP 106

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +E  SANP GP+HVGH R +++GDTLA     +GY V  +YY+ND G QI  +A  
Sbjct: 107 VRIVLEHTSANPNGPLHVGHIRNSILGDTLARAFRKAGYRVEVQYYVNDMGRQIAIVAYG 166

Query: 181 VFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-- 237
                  A     +D      Y                  E +   E++       +   
Sbjct: 167 FDHLDTGAKPGEKADHHIARVYVAANRDLEANPDKGAEIDERMQLIEKRDPATATQFREL 226

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V   +   +  ++ LN++HD FI E DF +     +  ++  LA+        +PP +  
Sbjct: 227 VSRCLDGFKVTMQGLNVKHDRFIWESDFVK--IGDMEKVLGRLAK----IPQAVPPTEED 280

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D+         +  G      L +SDG+  Y A DLAY   K  R FD +I V+G
Sbjct: 281 GTFSLDL---------SSCGYKKSYVLRRSDGTSVYAARDLAYHIWK-GRNFDRVIDVLG 330

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH     +L      ++EK     V+  E V L        MS RAG F++   +++E+
Sbjct: 331 ADHKLITGQLVCTLRLIAEKPP--EVVHFEFVSLPEG----SMSTRAGTFVSADELIEEM 384

Query: 418 GSDSVR---------------------------FMMLWRKNSELLDFDFCKVKEQSKENP 450
              ++                            + ++     +   FD+ +  +  +++ 
Sbjct: 385 QKRAIEEVQVRRPEIPVEERDAIAASVARAAIRYDIIKVSPEKSTVFDWKEALDFDRQS- 443

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             YVQYA+AR  SI  +A       D                  E+ L+ H+A++P +IE
Sbjct: 444 GPYVQYAHARACSILDRAGPFQERYDL------------LESPYEIALVKHIAKFPSIIE 491

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +      P+ LA Y  DLA +F+  + +         ++     +   RL LV A    +
Sbjct: 492 SVVRDLRPHMLATYARDLADLFNTFYHYD------PVLKGEGP-VRESRLTLVLAAEKTL 544

Query: 571 NSGLNIIGVESPNEM 585
              L  +G+++   M
Sbjct: 545 KEVLETLGIDALRSM 559


>gi|308068745|ref|YP_003870350.1| Arginyl-tRNA synthetase (arginine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305858024|gb|ADM69812.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 576

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 119/612 (19%), Positives = 219/612 (35%), Gaps = 81/612 (13%)

Query: 14  YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
             + I     +E+K +   + E P     G ++     +L++     P  IA  +   + 
Sbjct: 6   AAQAILAHTGLEEKEILS-LFEVPPQPEWGDVAFP-CFVLAKKFRKSPQHIALELAELVN 63

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
            +  + +   A   ++N+ L  S     L    +S  ++ R  IG G +V I+  S N  
Sbjct: 64  HEEGLTA--SASGAYVNITLDRSV-HIPLMLAELSKADFLRPNIGHGQRVVIDMSSPNIA 120

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNN 192
            P  +GH R  V+G  L  ++  +GY      ++ D G Q      +   W  ++ L ++
Sbjct: 121 KPFGIGHLRSTVIGAALYRILDETGYIPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHD 180

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLK 250
                   Y   + +       +    E     E  +     + ++ V+  +       +
Sbjct: 181 PIGESLKLYVRFHQEAEHDPTLEDEGREWFRRLEHGDAEAQQLWEFFVEVSLGEFDRMYQ 240

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            LNI  D  + E  ++      ++ ++  L  +G + E                    LL
Sbjct: 241 RLNITFDHVLGESFYN----DKMQTVVAQLRAKGLLEES----------------DGALL 280

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEA 369
            R           +LK DG+  Y   DLA    ++E    D ++YV+G +   + +++ A
Sbjct: 281 VRLEDEELP-PCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQVFA 339

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           V     E  A+    +   +  +      KMS R G  + L  V+DE             
Sbjct: 340 VLKHAGEAWAEQCEHVPFGLMRFAGK---KMSTRRGKVVKLEEVLDEAIARAQAIITQKN 396

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  ++ F  L       +DF   +      E    YVQY +AR RS+
Sbjct: 397 PDLQEQQAVAEDVGIGAIIFGDLKNNRLNEVDFSLEEALTFEGE-TGPYVQYTHARIRSL 455

Query: 465 FRQA-KDIFPDLDFDLFPRNVIPQESEFDT----------SELQLIVHLAEYPRVIENAT 513
             +A      D++ +    +++      D           +   L+  L  Y   +  A 
Sbjct: 456 LEKAYARADVDVNTNPSDNDLVQDSHSRDLNDVLDGMLGNAGWALLKQLGRYHGQLIRAA 515

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A +  D A  F+  ++  R       V          R+QL    A I+   
Sbjct: 516 RQLEPSVIARFALDTAQAFNRFYAKER------IVDGG-----QWRIQLAEQTADILACA 564

Query: 574 LNIIGVESPNEM 585
           L ++G+++PN M
Sbjct: 565 LQLLGLKAPNRM 576


>gi|270339605|ref|ZP_06005404.2| arginine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334434|gb|EFA45220.1| arginine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 615

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 123/646 (19%), Positives = 237/646 (36%), Gaps = 102/646 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    SS +   + E+      +    D+I +++ +    G+L T       +     
Sbjct: 11  MNIEKAISSAVLKAVSEL----YGQDVPADKIQLQKTKANFEGNL-TLVVFPFLKLSRKK 65

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I + +  +    + F A  GF+NL ++P     +L+ I          +    
Sbjct: 66  PEDTAKEIGSVLVRECQAVADFNAVGGFLNLVIAPDAWIALLNDINADAKYGETPVSADS 125

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 126 KLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAKIMEANGNKVVKTNIVNDRGIHICKSMLA 185

Query: 181 VFWRYQQAL---YNNDSDLPEGYYPGVYLKHVGKELAD---------------------- 215
                  A         D   G Y   + KH  +E+A+                      
Sbjct: 186 WKKWGNNATPESAGKKGDHLIGDYYVAFDKHYREEVAELKAQLMAEGLGEEEAEEKAKAD 245

Query: 216 ----KYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGD 269
               + + E+L   E+    + + +            +  KAL +  D    E   +   
Sbjct: 246 APLIREAREMLVKWEQGDPEVRELWQTMNNWVYAGFDETYKALGVSFDKIYYESKTYLEG 305

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + + +     +G  +                 +   +    T  G D  + LL+SDG
Sbjct: 306 KKKVEEGL----EKGLFFRK---------------EDNSVWADLTNEGLD-QKLLLRSDG 345

Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  Y   D+     ++ +   D MIYV+G++ + + + L  +   +  K  +  V     
Sbjct: 346 TSVYMTQDIGTADLRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYG 405

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVD-----------------------------EVGS 419
           +    +G   KM  R G  +    +++                              VG 
Sbjct: 406 MVELPNG---KMKSREGTVVDADDLIETMIEDARRTSDELGKFHDMAEEEKQEVARIVGL 462

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++++ +L     + + F+  +  +    N   ++QY +AR RSI R+A+     +  +L
Sbjct: 463 GALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTHARIRSILRKAEAEGITIPAEL 521

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 P +S  +  E+ LI  L E+   +++A     P  +A Y Y+L   F+  +   
Sbjct: 522 ------PADSPLNEKEISLIQKLDEFKVAVKDAGENYNPAGIANYCYELTKDFNQFYHD- 574

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A+     + RL L   VA  I + + ++G+E P  M
Sbjct: 575 -----YSILNADTEAQKITRLVLAANVAKTIKNAMELLGIEVPERM 615


>gi|312222441|emb|CBY02381.1| hypothetical protein [Leptosphaeria maculans]
          Length = 866

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 129/669 (19%), Positives = 235/669 (35%), Gaps = 133/669 (19%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +  F  + S +   L ++     V+KK++    +       HG L    A+   R    D
Sbjct: 247 LNPFDIYRSHITELLSQVS---GVDKKVI-YPTLAWTSKPEHGDLQ--LAVPALRIKKKD 300

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------G 109
               A+ +  +    P V    +     I  +  P  L  ++  +V+            G
Sbjct: 301 MKAFAQELADQFPESPLVKKPVVTNTS-IGFFFKPETLTALVVPMVLKSGANYGFNKNLG 359

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           ++   +      ++ +EF S N   P H GH R  ++G  LA+L   +G+EV R  Y+ D
Sbjct: 360 LKNPLDPSSGAKRMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYEGAGWEVIRMNYLGD 419

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK-----HVGKELADKYSSEL 221
            G Q   LA+         L+ N+ +L   P G+   +Y+K     H   E   +  +E 
Sbjct: 420 WGKQYGVLAIGY------DLFGNEEELVKNPIGHLYDIYVKVSSIQHDEAEQLKELKAEA 473

Query: 222 LNFPEE-----------------------------------KWLPIVKDYSVQAMMKIIR 246
               EE                                   K L I K +   ++ K  +
Sbjct: 474 AKLKEEGKDASEQEAKIKKIETEGIDEQARKYFKGMVDGEPKALGIWKRFRDLSIEKY-K 532

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                LNI++D +  E          + +    +  +                + C+   
Sbjct: 533 QTYARLNIRYDDYSGESQV---KDESMEEAAKIMWEK----------------KVCEESE 573

Query: 307 KQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
             ++   T     + + ++ K DG+  Y   D+     + E+  FD MIYV+ S    ++
Sbjct: 574 GAVIVDLTSHSKKLGKAVIKKKDGTSLYLTRDIGAAIERVEKYHFDRMIYVVASQQDLHL 633

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------- 417
            +L  +   +  K       + E  +    GM + MS R G    L  ++ +V       
Sbjct: 634 AQLFKIEELMGRKD------ISEKCQHINFGMVMGMSTRKGTAKFLDDILRDVGEKMHEV 687

Query: 418 ---------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                                G  +V    +  K      FD  ++    + +   Y+QY
Sbjct: 688 MKGNQAKYEQVEDPVKTADILGISAVMVQDMKGKRINHYTFDMDRMTSF-EGDTGPYLQY 746

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI+R+A     D        +        +   ++L+  LA +P    N    Q
Sbjct: 747 AHARLCSIYRKA--TTADPSVAELDLSTANLSLLNEPHAIELVRQLASWPDTFLNTLKTQ 804

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP  +  YL+ +A      + H +       V  + R + + RL L  A   ++N+G+ +
Sbjct: 805 EPTTVLTYLFKMAHALSSSYDHLQ-------VVGSERDVMIARLALYVAARQVLNNGMRV 857

Query: 577 IGVESPNEM 585
           +G+     M
Sbjct: 858 LGLSPVERM 866


>gi|86141177|ref|ZP_01059723.1| arginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831736|gb|EAQ50191.1| arginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 609

 Score =  341 bits (874), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 123/640 (19%), Positives = 236/640 (36%), Gaps = 104/640 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L    ++ +K+ ++E+          L+ + ++  R    G L T     + R    +
Sbjct: 19  MNLSEKLTNAVKDAVQELFSA------SLETVEVQPTRKDFEGDL-TVVVFPILRVAKGN 71

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I E I   +K + D  S F   KGF+NL ++ +Y        +   + +G      G
Sbjct: 72  PAVIGEQIGTYVKENLDEISDFNVVKGFLNLVIADAYYLNFF-DGIRDQMNFGH-EPEAG 129

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L+
Sbjct: 130 KAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKASGKKVYKTQIINDRGIHICKSMLA 189

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + ++ +      + L      G Y     K   ++                       +
Sbjct: 190 -WQKFGEGETPESTGLKGDKLVGNYYVKFDKAYKEEQSYLVAQGKTKEEAEKEAPLILEA 248

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            ++L   E     +V  +        +   +  K L +  D +  E + +       +D 
Sbjct: 249 QDMLRKWEAGDEEVVALWEKMNGWVYEGFEETYKNLGVDFDSYYYESNTYLLG----KDN 304

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I+   ++G  Y+                    +    T  G D ++ +L+SDG+  Y   
Sbjct: 305 IEEGLKKGVFYKK---------------GDGSVWCDLTEDGLD-EKLVLRSDGTAVYMTQ 348

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   MIY +G++   + K L  +   +    A+    L   +     
Sbjct: 349 DIGTAIQRVKDHPDVGGMIYTVGNEQDYHFKVLFLILKKLGYDWAEHLFHLSYGMVDLPS 408

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    +V+E                             +G  ++++ 
Sbjct: 409 G---KMKSREGTVVDADDLVEEMATTAGNIAQELGKLDGYSEAEKQELYKIIGLGALKYY 465

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + F+  +  +  + N   ++QY YAR +SI R+A +     D+        
Sbjct: 466 ILKVDPKKRILFNPEESVDF-QGNTGPFIQYTYARIQSILRKAAETGVAEDYAYEA---- 520

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    E +LI  LA YP  ++ A     P  +A Y YDL   F+  +       ++
Sbjct: 521 -----LQPKEKELIKQLALYPETVQLAAENHSPALIANYTYDLVKEFNSFYQ------QV 569

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + A+       R+ L   V  +I +   ++G++ P  M
Sbjct: 570 SILGADTDAEKSFRVALSKKVGEVIEAAFGLLGIQVPERM 609


>gi|54290192|dbj|BAD61080.1| putative arginyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 631

 Score =  341 bits (874), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 118/568 (20%), Positives = 218/568 (38%), Gaps = 92/568 (16%)

Query: 33  VIERPRDCAHGHLSTNAAMIL-SRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86
           ++E  +    G    N AM + SR  G      +P+ + + I   +     ++S+ +AG 
Sbjct: 1   MLEVSK-PGFGDYQCNNAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGP 59

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           G+IN+ LS +++ + +  ++V GI+     I    +  ++F S N    MHVGH R  ++
Sbjct: 60  GYINITLSSNWIAQRIQDMLVCGIKTWAP-ILPVKRAVLDFSSPNIAKEMHVGHIRSTII 118

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GDTLA +  F+  EV R  ++ D G Q   L   +F ++         D  +     V  
Sbjct: 119 GDTLAHMFEFTNVEVLRRNHVGDWGTQFGMLIEFLFEQFP--------DWEDVGNQAVGD 170

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFISED 263
                + + K   +  +F E       +D    A  KI +      ++ +   ++ + E 
Sbjct: 171 LQSFYKASKKRFDDDPDFKERARQAGGEDKYRAAWKKICQISRMEFDLVYKRLNVKLEEK 230

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                +P  I  +++ L  +G +                +    +++F      +D    
Sbjct: 231 GESFYNPY-IPPVLEELTNKGLI---------------VESKGARVIF-----VEDHPLI 269

Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           ++K DG + Y + DLA    +      + +IYV       +   L   A        Q  
Sbjct: 270 VIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHMLFTAAKMAGWLPEQNG 329

Query: 383 ------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
                   +   + L  DG   +   R  + + L  ++DE                    
Sbjct: 330 KKYPKASHVGFGLVLGSDGK--RFRTRCSEVVRLVDLLDEAKARSKAQLIKRFTGNGQIA 387

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        +G  +V++  L         F F ++    K N   Y+QYA+AR  S
Sbjct: 388 DWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTFSFDQMLS-DKGNTAVYLQYAHARICS 446

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A         D+    +    +     E  L +HL ++  V+E A    +P++L  
Sbjct: 447 IIRKA-------SKDVEKLKMTGAITLGHPYERFLGLHLIQFTEVVEQACADLQPHRLCD 499

Query: 524 YLYDLASVFHGHWSHGR--ENPRLRFVQ 549
           YLY L+  F   +++ +  ENP+L F+ 
Sbjct: 500 YLYSLSLTFSKFYTNCQVLENPKLGFLL 527


>gi|325955141|ref|YP_004238801.1| Arginyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437759|gb|ADX68223.1| Arginyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 590

 Score =  341 bits (874), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 126/612 (20%), Positives = 229/612 (37%), Gaps = 100/612 (16%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
              + I+  R    G   T     L + L   P  I + I   +     + S  +  KGF
Sbjct: 24  FPSLEIQFTRKEFEGDY-TLVVFPLIKTLKKKPEQIGQEIGEHLLAQKKIASYNVV-KGF 81

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+ L PS +   LS    +     +    K   V +E+ S N   P+H+GH R  ++G 
Sbjct: 82  LNIELLPSTIVSYLSENAQNVSYGLQFPTEKSKTVMVEYSSPNTNKPLHLGHVRNNLLGY 141

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++A ++A SG  + +   IND G  I    L+ + ++        S +   +  G Y   
Sbjct: 142 SVAEIIAASGANIVKTQIINDRGIHICKSMLA-WEKFGNGETPESSKIKGDHLVGKYYVE 200

Query: 209 VGKELADKYSSELLNFPEEKWLPIVK----------------DYSVQAMMKIIR------ 246
             K   D+    + N  EE+                      D  V+A+ + +       
Sbjct: 201 FDKHYRDEIKELVANGMEEEEAKKKAPIFIEAQEMLRKWEANDPEVRALWEKMNNWVYDG 260

Query: 247 --DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                + L +  D ++ E D +       +D+++   R G  Y                 
Sbjct: 261 FAKTYQRLGVDFDEYLYESDTYILG----KDLVEEGLRNGVFYRK--------------- 301

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
               +    T  G D ++ +L++DG+  Y   DL     +++ R  D++IYV+G++   +
Sbjct: 302 QDGSVWIDLTEDGLD-EKLVLRADGTSVYITQDLGTAVERFKHRELDDLIYVVGNEQDYH 360

Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
            K L  +   +    A+ +  L   +V L       KM  R G  +    ++ E      
Sbjct: 361 FKVLFLILQKLGYSWAETLQHLSYGMVDLPEG----KMKSREGTVVDADDLMQEIYETAK 416

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  +   ++++ +L     + + FD  K       N   +
Sbjct: 417 EIAQELGKLEGYTDAEKESLYEIIAMGALKYFILKVDPKKRILFDP-KESVDFNGNTGPF 475

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQYAYAR +S+ R+  +   D+D+       I         E +LI  L+++   I+ A 
Sbjct: 476 VQYAYARIQSLLRK--ESPKDMDWSTIKLQGI---------EKELIRLLSDFGETIQKAA 524

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A Y YDL  +++  + +         ++  N      RL L   V + I SG
Sbjct: 525 EELSPAIIANYTYDLVKLYNSFYQN------TPILKTENETEKHFRLMLSLWVGNTIASG 578

Query: 574 LNIIGVESPNEM 585
           L ++G++ P  M
Sbjct: 579 LKLLGIQVPERM 590


>gi|303233657|ref|ZP_07320311.1| arginine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495091|gb|EFL54843.1| arginine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 564

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 124/607 (20%), Positives = 239/607 (39%), Gaps = 72/607 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +K  +   D  +  E++I D  +IE P +   G  +      L++     P  IA
Sbjct: 3   NFKDEVKKIILGFDTGL-TEEEISD--LIEIPPNSDMGDYAFPV-FKLAKTFRKAPNLIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +  +   + ++  +   G  ++N +++ S L + + +  +   ++G + IG G  V +
Sbjct: 59  EDLAQKEFQNENIKKIANVGP-YVNFFVNNSKLIESVLTEAIKD-DFGSSHIGVGKNVVL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-LSVFWR 184
           +F S N   P H+GH R  V+G+ + ++M   G+  T   YI D G Q   +    + W 
Sbjct: 117 DFSSTNIAKPFHIGHLRSTVIGNAIRNIMKHQGFNTTGVNYIGDYGTQFGMMISAYLKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMM 242
            +  +  +        Y          E     + +  +  E+K    VK +S   +  +
Sbjct: 177 DENKINADPIKELLNLYVKYNKIAKEDETYMDEARDWFDKLEKKDPTAVKLWSWFREISL 236

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  +     L ++ D F  E          I D ++ + ++  + E       S      
Sbjct: 237 KEFQRVYDLLGVKFDNFNGESF----HSQFIGDALEAIDKKNLLEE-------SDGAMII 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           ++D + L              + KS+GS TY   D+A    + +   F   +YV+ S   
Sbjct: 286 NLDDENL----------PPVLIKKSNGSSTYLTRDIATAMYRKKTYDFYKNVYVVASQQK 335

Query: 362 GYVKRLEAVAAAVSEK-KAQINVLLCELVRL---------------------YRDGMPIK 399
            + ++L AV   +          +   +V +                       D     
Sbjct: 336 LHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDVLNRAIDKTKSI 395

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + +R  +      V  +VG  +V F  L+    +   FD+ +V     E    Y QY +A
Sbjct: 396 IEERNPNLENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE-TGPYTQYTFA 454

Query: 460 RCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           R  SI  + + ++  +  FDL            D +E+ ++ HL+++  V+ NAT   EP
Sbjct: 455 RSCSILDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFEEVLLNATEKYEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  Y  +LA +F+  +++         +     +L   RL L ++V   +   L+++G
Sbjct: 505 SFLTRYTVELAKLFNKFYANC-------PINTAEDELKYQRLYLTYSVNKCLKLSLSLLG 557

Query: 579 VESPNEM 585
           +E+P  M
Sbjct: 558 IEAPVRM 564


>gi|325473427|gb|EGC76622.1| arginyl-tRNA synthetase [Treponema denticola F0402]
          Length = 590

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 114/627 (18%), Positives = 237/627 (37%), Gaps = 82/627 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
             D  +  +  + +    I  E   K + ++I IE P +   G ++       ++     
Sbjct: 1   MEDIKTTWQKIIADSLNGIAPETCDKILPEQINIETPPNPEMGDVAFPL-FTFAKSFKSS 59

Query: 61  PLTIAELIVARIKIDPDVDSVFI--AGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLI 117
           P  IA  + AR+  + D+    +  A   ++N++L+   L    L  ++     YG+   
Sbjct: 60  PAKIASDVCARLLENEDIKKYGMPKAIGPYLNVFLAKGDLASNVLDKVLKEKENYGKTSS 119

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             G ++ IEF S N   P+H+GH R   +G++++ ++ F G +V +   IND G  I   
Sbjct: 120 LSGKRIMIEFSSPNTNKPLHLGHLRNDALGESISRILKFCGADVFKVNIINDRGVHICKS 179

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGV------YLKHVGKELADKYSSELLNFPEEKWLP 231
            ++ + ++ +       ++    + G              E A+  + ++L   E     
Sbjct: 180 MIA-YQKFGEGKTPESENIKSDRFVGDMYVAFHKYSQENPEKAEAEAKQMLLDWEAGENK 238

Query: 232 ----IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
               + K  +  A+ + I++  K   I  D    E + +      I   ++     G  Y
Sbjct: 239 ELIGLWKKMNGWAI-EGIKETYKRTGISFDKLYFESETYLKGKDQILKGLEA----GVFY 293

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346
           +                +   +      +  D  + LL+SDG+  Y   D+     ++ +
Sbjct: 294 K---------------EEDGSVWVDLAPIKLDK-KVLLRSDGTSLYMTQDIGTAISRHKD 337

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAG 405
             F+ MIYV+G++   + K L  V   +  + A  +  L   +V L       KM  R G
Sbjct: 338 WPFNQMIYVVGNEQEYHFKVLFYVLKQLGFEWADDLYHLSYGMVNLPEG----KMKSREG 393

Query: 406 DFITLRHVV---------------------------DEVGSDSVRFMMLWRKNSELLDFD 438
             +    ++                           + +   ++ + +L     + + F+
Sbjct: 394 TVVDADDLINSLQDEALKKIEENGREKEVGDAAVAAENIAVGALHYFLLQVSPKKDMLFN 453

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +    +  N   Y+QY  AR  SI R+A+        +      +      + SE  L
Sbjct: 454 PKESLSFT-GNTGPYLQYMGARISSILRKAETAEGK---EKLKNGKLNASLLTNESEWAL 509

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  L ++P  +E + + ++P  L  YLY+L+  F   +           +   N  L+  
Sbjct: 510 LKTLEDFPEQVERSALRKDPSALTAYLYELSKAFSRFYRDC------PILSGENADLSYT 563

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R++L  A   ++ + +N++ +     M
Sbjct: 564 RMELARATKIVLQNAMNLVLIPFMEIM 590


>gi|71985068|ref|NP_001022552.1| aRginyl aa-tRNA syntheTase family member (rrt-1) [Caenorhabditis
           elegans]
 gi|51536889|gb|AAU05575.1| Arginyl aa-trna synthetase protein 1, isoform b, partially
           confirmed by transcript evidence [Caenorhabditis
           elegans]
          Length = 692

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 121/576 (21%), Positives = 227/576 (39%), Gaps = 69/576 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD-- 60
           +F    S  K  +++    + V       +++    +   G    N+AM ++  L  +  
Sbjct: 129 IFGRLQSLFKKAIEDAFPGLDVP------LLLAETPNPQFGDYQCNSAMPIAAKLKANKI 182

Query: 61  ---PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              P  +A+ I A++      V+ + +   GFIN++L+  YLR+ +S +   G++  +  
Sbjct: 183 NKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGVKLPKLT 242

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                +V ++F S N    MHVGH R  ++GD++  L    G++V R  +I D G Q   
Sbjct: 243 R---KRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGTQFGM 299

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           L   ++ R+   L      LP+             +L   Y      F E++        
Sbjct: 300 LIAHLYDRFPDFLKK----LPD-----------ISDLQAFYKESKKRFDEDEQFKKRAYE 344

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            V  +     D +KA N   D+    +   +      I+D+ ++   Q  + E +     
Sbjct: 345 YVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFY-QDKMIELVKWVKT 403

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
           +K     + D +Q++F +   G D+   ++KSDG +TY  +DLA  K +  E   D  IY
Sbjct: 404 NKPDMLREEDGRQIMFPT---GCDIPLTVVKSDGGFTYDTSDLAALKYRMLEEKCDWNIY 460

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ S  S +++ + A           I  +      L       K   R+G+ + L  ++
Sbjct: 461 VVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFGLVLGDDKKKFKTRSGETVRLLDLL 520

Query: 415 -----------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                                        D V    V++  L    ++   F F ++ E 
Sbjct: 521 SEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGCVKYADLSHTRTQDYVFSFDRMLE- 579

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ YAY R +SIF + +    DL   +     +P +      E +L   L + 
Sbjct: 580 DRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIASTPTLPLDH---PGEFKLAKQLLKL 636

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +     +   +++  Y+Y LA++FH  ++    
Sbjct: 637 SDCVLLVLDSLMLHQMCDYVYQLATLFHDFYNECYV 672


>gi|294675038|ref|YP_003575654.1| arginine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474183|gb|ADE83572.1| arginine--tRNA ligase [Prevotella ruminicola 23]
          Length = 594

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 118/625 (18%), Positives = 241/625 (38%), Gaps = 71/625 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S      +K +      EK     + +++ R    G+L T       +     
Sbjct: 1   MNIEALISKAAGEAVKALYGMDATEK----MLQLQKTRSEFEGNL-TLVVFPFVKAAKKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +  +      F   KGF+NL +      ++L +I        + +  + 
Sbjct: 56  PEQTAQEIGEYLTANCAAVEKFNVVKGFLNLSVGDGAWLQLLDAIDKDERFGMKQVTDES 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            + +Y        S     +  G Y     KH  +E+ +  +  +     ++  P++K+ 
Sbjct: 176 -WLKYGNGETPETSGKKGDHLIGDYYVAFDKHYREEVKELVAQGMDEEKAKQEAPLIKE- 233

Query: 237 SVQAMMKIIRDDLKALNIQ----HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + + ++K   +D +   +     + ++   D+ ++     +    D +  +   Y     
Sbjct: 234 AHEMLVKWENNDPEVRALWEKMNNWVYAGFDETYK----KMGVSFDKIYYESQTYLKGKA 289

Query: 293 PPKSKTTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349
             +    +      +   +    T  G D  + LL+SDG+  Y   D+   + ++ +   
Sbjct: 290 KVEEGLAKGLFERHEDNSVWADLTNEGLD-QKLLLRSDGTSVYMTQDIGTAEMRFKDYPI 348

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D MIYV+G++ + + + L  +   +  K  +        +    +G   KM  R G  + 
Sbjct: 349 DKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELTHFSYGMVELPNG---KMKSREGTVVD 405

Query: 410 LRHVV-----------------------------DEVGSDSVRFMMLWRKNSELLDFDFC 440
              ++                               VG  ++++ +L     + + F+  
Sbjct: 406 ADDLMALMVEDAYKTSMELGKFDDMTEEERREIARVVGMGALKYFILKVDARKNMLFNPE 465

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +  +    N   ++QY YAR RSI R+A+                  + +    E++L+ 
Sbjct: 466 ESIDF-NGNTGPFIQYTYARIRSILRKAEAEG---------LKPANAQVDLAEKEVELVQ 515

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            + E+   +E A     P  +A Y Y+L  VF+  +           +   + +   +RL
Sbjct: 516 KMNEFGAAVEQAGKDYSPSGIANYCYELTKVFNQFYHD------YSILNEPDEQKKAVRL 569

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L   VA II +G++++G+E P  M
Sbjct: 570 MLAKNVAKIIKNGMSLLGIEVPERM 594


>gi|295400647|ref|ZP_06810624.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977228|gb|EFG52829.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 302

 Score =  340 bits (872), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 108/332 (32%), Positives = 175/332 (52%), Gaps = 30/332 (9%)

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +  D++ SE   ++     I + +  L  +G++YE                      FRS
Sbjct: 1   MTFDVWYSETSLYK--SGKIDEALAVLRERGHIYE----------------KDGATWFRS 42

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           T  GDD DR L+K DG+YTY   D+AY + K  RGF  +I + G+DH GY+ R++A  AA
Sbjct: 43  TTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWGADHHGYIPRMKAAIAA 102

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +      + V + +LV LY++G  +KMSKR G  +T+R +++EVG D+ R+    R +  
Sbjct: 103 LGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVGLDATRYFFAMRSSDT 162

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            LDFD      QS ENPV+YVQYA+AR  SI RQ +++    + DL        +     
Sbjct: 163 HLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGDL------QLDYIQTE 216

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E++L+  L E+P  +  A + + P+++  Y+++LAS  H  ++        + +   N 
Sbjct: 217 KEIELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYNAE------KVLDPENA 270

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +  RL L+ AV   + + L +IGV +P +M
Sbjct: 271 EKSRARLALMKAVQITLQNALALIGVSAPEKM 302


>gi|119511908|ref|ZP_01631006.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463404|gb|EAW44343.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 470

 Score =  340 bits (872), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 111/503 (22%), Positives = 200/503 (39%), Gaps = 75/503 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            ++F S N    MHVGH R  ++GD++A ++ F G++V R  ++ D G Q   L   +  
Sbjct: 2   IVDFSSPNIAKEMHVGHLRSTILGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLRE 61

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--------D 235
            Y +AL   ++ L  G     Y K      A +   E   F E     +V+         
Sbjct: 62  VYPEALTTANA-LDIGDLVSFYRK------AKQRFDEDEAFQETARQEVVRLQAGAEDTL 114

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           ++ + + +  R + + +    D+ + E      +P  +  ++++LA+ G + E       
Sbjct: 115 HAWKLLCEQSRREFQIIYDLLDVQVIERGESFYNP-LLPSVVEDLAKSGLLVEN------ 167

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIY 354
            +  Q   ++       +   G+ +   + KSDG Y Y   DLA  + + ++     +IY
Sbjct: 168 -QGAQVVFLEG-----FTNREGEPMPLIVQKSDGGYNYATTDLAALRYRIQQDEAKRIIY 221

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V  S  S +  +   VA      +  +  V +   + L  DG   K   R+GD + LR +
Sbjct: 222 VTDSGQSNHFAQFFQVARKAGWVRNDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDL 279

Query: 414 VDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           +DE                               VG  +V++  L +  +    F + K+
Sbjct: 280 LDEAVIRARADLEARLKEEEREETEQFISEVAEIVGISAVKYADLSQNRTSDYIFSYDKM 339

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +  K N   Y+ YAYAR + I R+    F +L  ++       +      +EL L  +L
Sbjct: 340 LDL-KGNTAPYMLYAYARIQGISRKGGINFAELGENV-------KVLLQHETELALAKYL 391

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            +   VI +      P +L  YLY+L+  F+  +   +       V      L   RL L
Sbjct: 392 LQLDGVISSVEQELLPNRLCEYLYELSKKFNQFYDRNQGVR----VLEAEEPLRTSRLVL 447

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
               A  +  GL+++G+     M
Sbjct: 448 CDLTARTLRLGLDLLGIRVLERM 470


>gi|108762554|ref|YP_631488.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|21307601|gb|AAK59398.1| Arg-tRNA synthetase [Myxococcus xanthus]
 gi|108466434|gb|ABF91619.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 573

 Score =  340 bits (872), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 118/584 (20%), Positives = 217/584 (37%), Gaps = 77/584 (13%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-S 94
           +P + AHG LS  A   L++     P  IA  +   + +      +   G  ++N    +
Sbjct: 33  KPAEPAHGDLSF-ATFPLAKAQKKAPPAIAAGLAQSLSVPGL--EIKAVGP-YVNARFPT 88

Query: 95  PSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +  +++ +   +GI YG     G+G  V I++ S N   P+   H R   +G  +A++
Sbjct: 89  LPFTAEVIDAARSAGIRYGGDEDAGRGKTVAIDYSSPNIAKPIGFHHIRTTFLGHCIANI 148

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+ V    Y+ D G Q   +A+        A  ++   L E Y           E 
Sbjct: 149 YRALGWRVEGINYLGDWGKQFGLVAVGFQEYGDPARIDDMGHLVEVYVKANKRAEAEPEF 208

Query: 214 ADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +K  +    +   + + L +   +   ++ K  +     + I+ +    E  +      
Sbjct: 209 DEKARAFFRRMEAGDAEALKLWNQFRDTSI-KGFKKIYARMGIEFEHIEGESRYQ----G 263

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +ID +A++                      +  L+   T   ++    L K+DGS 
Sbjct: 264 KMDAVIDQIAKK----------------PGVKESQGALIVDLTYAENEPPILLKKNDGST 307

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   DLA  + +YER  FD  +YV+  D + + +++      +    A   V +     
Sbjct: 308 LYATRDLAAAQDRYERFQFDKSLYVVAQDQALHFRQVFRALKEMDLPWADRTVHVAF--- 364

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDS 421
               G    MS R G  + L  V+DE                             +   +
Sbjct: 365 ----GRIHGMSTRKGQVVQLNDVLDEARERVSVKVRENVEAGRIQTDDADALSEQIALGA 420

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           + F  L  K +    FD+ +V    + +   Y+QYA+AR  ++ R+        D  L  
Sbjct: 421 IAFGDLKHKRASDYTFDWDEVLSF-EGHTGPYLQYAHARAVNVLRKGGGAPASYDAALLT 479

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                        E  L+  +   P V+ +A    EP  +A  L D+AS    +++ G +
Sbjct: 480 L----------PEEQALLREIMRLPEVVRDAAEQYEPSLVARLLLDVASALSRYYTLGNQ 529

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R     N  L   RL L+ A    + +GL ++G+ +P+ M
Sbjct: 530 ERDKRINVEGNDALRSARLALIDAARVTLAAGLTLLGIPTPDNM 573


>gi|21672518|ref|NP_660585.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654287|sp|Q08888|SYR_BUCAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|21623140|gb|AAM67796.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 580

 Score =  339 bits (871), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 120/622 (19%), Positives = 234/622 (37%), Gaps = 79/622 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  L +I+     E  I+        +    GH   +  M +S  L + 
Sbjct: 1   MNIKYLIKKDIEQALIKINSNYTYEVFIIS------SKKIELGHYQVDNLMKISSRLKIK 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + I+  I+       +  +  GFIN+++   +L + L    +S    G   I   
Sbjct: 55  PYKLFQKILILIEKKKIYKKIIFSHPGFINIFIKNEWLSEKLEIPFIS-SRLGVKYIYPK 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++ S N    MHVGH R  ++GD    ++ F G +V R  +I D G Q   L   
Sbjct: 114 KNIVIDYSSPNIAKEMHVGHLRSTIIGDVTVRILEFLGQKVIRANHIGDWGTQFGILIAY 173

Query: 181 VFWRYQQALYNNDSDLPEGY---YPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
           +  +        +    +     Y     ++   EL  K S E    L   ++    I K
Sbjct: 174 LEDKKLLKKLKKNLLSLQDLDNIYCQSKKQYNSNELFSKKSREFVVKLQNGDQYCCAIWK 233

Query: 235 DYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
                 M++  +   K LN+  +    + E  ++   P     I+++L +Q    E    
Sbjct: 234 KLVSITMLENYKI-YKKLNVTLEEKHTMGESFYNPMLP----KIVEDLKKQKIAIE---- 284

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDN 351
                      +D  +       +GD +   + K D  + Y   D+A  K +Y+    D 
Sbjct: 285 ---KNGAVIVFLDEFK-----NRMGDSMGVIIRKKDKGFLYSTTDIACLKYRYQNLHADR 336

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           +IY   S    ++ +   +A   +     + +      + L ++  P K   R G+ I L
Sbjct: 337 IIYYTDSRQYQHLLQSWTIAEKANYISKNLLLEHHMFGMMLSKNRRPFK--TRDGNTIKL 394

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
            ++++E                           +G  +V++  L +  +    FD+ K+ 
Sbjct: 395 SNLLNESINRATNLIQKKQPNLCKKKLIKLGEIIGISAVKYSDLSKNRNTNYIFDWDKML 454

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + N   Y+QYAY R  SI +++      +   +            + SE+ L + + 
Sbjct: 455 SF-EGNTAPYIQYAYTRIISILKKSNIPLHKIKMKII---------LNEESEINLAIKIL 504

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+  +I        P+ +  YLY L++ F   + +         + +   K+   R++L 
Sbjct: 505 EFEEIILLIAKNGTPHIMCKYLYQLSTYFSHFYENC------SILFSEKIKIRKSRIKLS 558

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  I  GLN++G+++  +M
Sbjct: 559 FLTAKTIKKGLNLLGIKTIKKM 580


>gi|262037521|ref|ZP_06010980.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748451|gb|EEY35831.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 575

 Score =  339 bits (871), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 123/598 (20%), Positives = 239/598 (39%), Gaps = 75/598 (12%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82
           K+  K   ++ I+           TN A+I S+ +  +P  IA  I  + + +  +D   
Sbjct: 18  KIFGKNSQKVEIQYSSKKEFADFQTNFALINSKIIEKNPREIAAEIADKFEDNDIIDKFE 77

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           I   GF+N+Y+  S + + L  I   G       I    K  I++ S N    MH+GH R
Sbjct: 78  ITDPGFLNIYIKNSKIIEELKKI---GEGKYIFPIDTSKKTIIDYSSPNIAKRMHIGHLR 134

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY 201
             ++GD+L  ++ + G++V  + ++ D G+    L +    W  ++    N    P G  
Sbjct: 135 STIIGDSLKRILEYVGFKVLGDNHLGDWGSHFGKLIVGCNKWLDEEEYKKN----PIGEL 190

Query: 202 PGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
             +Y+K   +       E++ K   E L   +++ + + K++ V+  +K        LN+
Sbjct: 191 ERIYIKFSDEAQLNPELEVSAKEEWEKLKARDKENVKLWKNF-VKCSLKEFEKVYNILNV 249

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D++  E  +       I +I+++L  +                +   +D   L     
Sbjct: 250 KFDMYNGESFY----AEMIPEILESLKNK----------------KIAVLDDGVLTVYFA 289

Query: 315 MVGDDVDRPLLKSDGSY-TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAA 372
                    L + DG+Y +Y + DLA  K + +    +N IYVM      + +++  ++ 
Sbjct: 290 KEEKITPCILQRKDGNYISYPSTDLATIKYRKDVLNIENAIYVMDERPKEHFRQVFKISE 349

Query: 373 AVSEKKAQINVLLCELVRLYRDG-----------------------MPIKMSKRAGDFIT 409
              ++ A     +   +  + D                            +  R  D   
Sbjct: 350 MAGKEYAYEKTHVWFGIMRFEDDIISSATEGNNIRLINILEQAVKEAEKIIDLRNPDLSE 409

Query: 410 LR--HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                +   VG  +V++  L +     + F + KV    +EN   Y+QY Y R  SIFR+
Sbjct: 410 KEKKEIGKIVGIGAVKYFDLSQNRMTPISFSWDKVLNF-EENTSPYLQYTYVRIMSIFRK 468

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            K+   D + +    +       F+  E +L   L ++P  +  A  A +P  +A YL++
Sbjct: 469 IKENNIDYNKNYRQIS-----ENFNGEERELATALLKFPYSVMKACEAYKPNLIADYLFE 523

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            A +F+  ++          ++  ++    M+L L    A II  GL ++G++    M
Sbjct: 524 TAKIFNTFYATE------SILKEEDKSRFYMKLLLAEKTAYIIKEGLQLLGIDVVERM 575


>gi|160947527|ref|ZP_02094694.1| hypothetical protein PEPMIC_01461 [Parvimonas micra ATCC 33270]
 gi|158446661|gb|EDP23656.1| hypothetical protein PEPMIC_01461 [Parvimonas micra ATCC 33270]
          Length = 578

 Score =  339 bits (870), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 121/598 (20%), Positives = 229/598 (38%), Gaps = 76/598 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   + + + ++D  +  E+    R +IE P +   G  S      LS+ L   P  I+
Sbjct: 3   NFKDIVIDTIFDLDINLNKEE---IRELIEIPPNPEMGDFSF-PCFKLSKILRKAPNIIS 58

Query: 66  ELIVARIKIDPDVDS-VFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           E +V RI ID  + S V   G  +IN ++ +  + + ++  I     +YG +       +
Sbjct: 59  EELVNRINIDDSIFSNVKNVGP-YINFFVRNSEFSKNVIKEIFDKKEKYGSSQDNLDKTI 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I++ S N   P H+GH R  ++G+ + ++  F GY      ++ D G Q   +  +   
Sbjct: 118 VIDYSSTNIAKPFHIGHIRSTLIGNVIKNIYNFLGYNTVGVNHLGDYGTQFGKIIAAY-- 175

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAM 241
                L+ ND ++       +   +V      K   ++L    +    L    + SV+  
Sbjct: 176 ----KLWGNDEEINADPINQLLKLYVDFNNLCKTDEKMLETARDYFNKLENGDEESVRLW 231

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                  L      +D    + D +RG+      I D++  L  +  + E       S  
Sbjct: 232 NWFKDISLMEFQKVYDKLKVKFDSYRGEAYHSQFIDDVVKELEDKNLLVE-------SDG 284

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMG 357
            +  ++D+  L              +LKS+ S TY   D+A     K +  F   IYV+ 
Sbjct: 285 CKIVNLDKYDL----------PPALILKSNSSSTYITRDIATALTRKKDYNFYKNIYVVA 334

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---GMPIKMSKRAGDFI------ 408
           +    + ++L+AV   +  + A+  + +   +   +D   G   K+S R G+ I      
Sbjct: 335 TQQKLHFQQLKAVLEEMGYEWAKDCIHVSFGMVSVKDNFLGTSAKLSTREGNVIFLNDVL 394

Query: 409 -------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                  +  EVG  +V F  L+    +   FD+  V     E 
Sbjct: 395 EKSVEKTLEIINERNSSLENKEEIAKEVGIGAVIFQELFNTRIKDYSFDWNNVLNFEGE- 453

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              YVQY+ AR  SI  +        + D+   +      + +  EL LI  + ++  ++
Sbjct: 454 TGPYVQYSAARANSILEKNDFYLKLDNIDISKVS----NYKMNIDELSLIKSIYKFEDIL 509

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            ++    EP  LA Y+ ++A +F+  ++          +      +   RL L +   
Sbjct: 510 LDSAKKYEPSILARYITEVAKLFNKFYNSC-------PISNQEDSVKEFRLILTYCTR 560


>gi|332299753|ref|YP_004441674.1| Arginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176816|gb|AEE12506.1| Arginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 604

 Score =  339 bits (870), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 121/629 (19%), Positives = 229/629 (36%), Gaps = 69/629 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+   S  + + L  +           D I +   R    GH+ T       +     
Sbjct: 1   MSLYRQLSEAIASTLHTLYGLTTT----ADEITLTATRPEFEGHM-TLVVFPYLKASHKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AE I A+++   D+ + +   KGF+NL L+ +     L  I  +          + 
Sbjct: 56  PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDTVWISALREIAETPHYGHITPTAQS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA ++  SG+ V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS------ELLNFPEEKWLPIVK 234
            + R+        S     +  G Y     KE   + +       +  +   E    ++ 
Sbjct: 176 -WLRWGNGETPESSGKKGDHLIGDYYVRFDKEYRAELAQIRAAHPDWSDEEVEAKSQLMA 234

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           D + Q + +  + D +   +   +            S +    D +  +   Y       
Sbjct: 235 D-ARQMLRQWEQGDPEVRALWRQMNEWVYKGFDETYSRMGVSFDKIYYESDTYLVGREEV 293

Query: 295 KSKTTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
                +      +   +       G D  + LL+SDG+  Y   D+   K +Y+    D 
Sbjct: 294 LRGLKEGLFERHEDGSVWADFEAEGLDK-KILLRSDGTSVYITQDIGTAKLRYQDFPIDQ 352

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           M+YV+G++   + + L  +   +  K  + +      +V L       KM  R G  +  
Sbjct: 353 MVYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPNG----KMKSREGTVVDA 408

Query: 411 RHVVDE----------------------------------VGSDSVRFMMLWRKNSELLD 436
             ++D                                   VG  ++++ +L     + + 
Sbjct: 409 DDLMDAMRDTALEVARTAQQAKGVELAAEPTAEELRTAEMVGLGALKYFILKVDPRKNMM 468

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F+  +  +    N   ++QY YAR  S+ ++A ++             +         E 
Sbjct: 469 FNPEESIDF-NGNTGPFIQYTYARICSLLQKADEMGYKHQLPEGGALALSS------YET 521

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L +YP V++ A  +  P ++A Y YDL   ++  +           ++  +  L 
Sbjct: 522 ALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYHEC------SVLREEDEALR 575

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
            MRLQL   VA  I+S + ++G+  P  M
Sbjct: 576 SMRLQLSKTVAETIHSAMGLLGIALPERM 604


>gi|289581095|ref|YP_003479561.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530648|gb|ADD04999.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 600

 Score =  339 bits (870), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 138/634 (21%), Positives = 246/634 (38%), Gaps = 85/634 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F      ++  L+     ++      D + IE P +     L+++ A  L+   G  P 
Sbjct: 1   MFLALREEVEGALESALAALEYPT---DDLGIEEPPEDVESVLASSVAFRLAGEAGAAPP 57

Query: 63  TIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +A  +   I  D     +V      ++N   S +YL   L +   +   +   L  +  
Sbjct: 58  QVAGQLADEIDTDELTYVAVVQTQGPYLNFLPSDAYLATTLETATEADYGH---LDDREE 114

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            V +E  SANPTGP+HVG  R  ++GD +A+L+  +GY+V R YY+NDAG QI T   + 
Sbjct: 115 SVVVEHTSANPTGPVHVGRARNPIIGDAVANLLDAAGYDVERHYYVNDAGRQIATFTWAY 174

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD----------KYSSELLNFPEEKWLP 231
               ++ L +        Y    Y +     L D               ++   EE    
Sbjct: 175 ETFDEEDLEDEPERDRIEYDLVRYYRKGNAFLEDGPEDEVEDAEAEIEAIMQGLEEGNEE 234

Query: 232 IVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                S  V  ++  + + L  L  + D F+ E  F R        ++D L         
Sbjct: 235 AYDRVSEVVDQVLGGMTECLARLPAEFDEFVKETQFMRN--GDTDALVDRLQE------- 285

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                      +   +           G D +   L+SDG+  Y   DLA+ + K+E  +
Sbjct: 286 ---------LDEAVYEDDAWQLELDDHGIDKNLVFLRSDGTTLYTTRDLAHHEWKFE-NY 335

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D  + V+G DH     +L      +     Q+  ++   V L      + MS R G  + 
Sbjct: 336 DRAVTVLGEDHKLQADQLGQTLELLGNDTDQLENVIFSWVNLPGG---LGMSTRKGTGVD 392

Query: 410 LRHVVDE---------------------------------VGSDSVRFMMLWRKNSELLD 436
           L  ++DE                                 VG  +VR+ ++ ++ ++ + 
Sbjct: 393 LDDLLDEAIDRAREEVEDRLDDRIRDDDLDEEDIERIAHQVGIGAVRYDIVSKQATKAIT 452

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEF 491
           F++ +  +   ++   YVQY +ARC  I  +A       +      +    + I  +   
Sbjct: 453 FEWDQALDFEAQS-APYVQYVHARCCGILEEAGFDPTEPLAAAGQAESLDLDAIDADLLE 511

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             +E  L+  +A +P V++ A    EP+++A Y  +    F+  +   RE P L      
Sbjct: 512 TPAEQDLLETIARFPAVVDEAASDLEPHQIATYTREFGDRFNTFY---RECPVL--ADDV 566

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + ++   RL LV A    I + L+++GV +P  M
Sbjct: 567 DPEVRETRLALVAASKHTIANALSVLGVAAPRSM 600


>gi|288803789|ref|ZP_06409217.1| tRNA ligase [Prevotella melaninogenica D18]
 gi|288333776|gb|EFC72223.1| tRNA ligase [Prevotella melaninogenica D18]
          Length = 606

 Score =  339 bits (870), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 118/642 (18%), Positives = 240/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++         ++   +     I +++ R    G+L T     L +     P   A+
Sbjct: 3   IEEQITVAALAAVKELYGTEVPEKMIQLQKTRSDFEGNL-TLVTFPLLKTSHKKPEDTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K +    + F   KGF+NL ++ +    +L+ I        + +  +   V IE
Sbjct: 62  DLGEYLKKNCKAVADFNVVKGFLNLVIAQAAWTGLLNDINADEKFGEKRVTDESPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFPE-----EKWLPIVK 234
             +    +     +  G +        K   K+L ++Y  E +   E     E   P++K
Sbjct: 181 NGITPEQAGKKGDHLIGDFYVLFDKHYKEECKQLQEQYEKEGMTADEAKKKAEHEAPLIK 240

Query: 235 ------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       D  ++A+ + +         +  KA+ +  D    E + +      + 
Sbjct: 241 EAHDMLVKWEANDPEIRALWEKMNNWVYAGFDETYKAMGVGFDKIYYESNTYLVGKKKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +     +G                    +   +    T  G D  + LL+ DG+  Y 
Sbjct: 301 EGL----EKGLF---------------IRKEDNSVWADLTNEGLD-QKLLLRKDGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +    
Sbjct: 341 TQDIGTAEMRFNDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVV------------------------------DEVGSDSVR 423
           +G   KM  R G  +    +V                                VG  +++
Sbjct: 401 NG---KMKSREGTVVDADDLVASMIENAKSLSEDKVNKLEGITEEEKNEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A+     L        
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAQNITL------PA 510

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  ++  +  E+ LI  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 511 TLNDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL +   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILNADTEAEKIARLMIAKNVAKVIKNGMALLGIEVPERM 606


>gi|281421436|ref|ZP_06252435.1| arginine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404508|gb|EFB35188.1| arginine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 606

 Score =  339 bits (870), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 126/647 (19%), Positives = 249/647 (38%), Gaps = 103/647 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +  +  S +   +KE+  +   EK     + +++ +    G+L T       +     
Sbjct: 1   MKIENEIISSVIAAVKELYGQDVPEK----MVALQKTKSNFEGNL-TLVVFPFLKMSKKK 55

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P   A+ I   +K +  +V + F   KGF+NL ++P+    +L++I        + +   
Sbjct: 56  PEDTAQEIGEYLKKNCANVIADFNVVKGFLNLSIAPAAWVGLLNTINADPKFGEKPVTEN 115

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L
Sbjct: 116 SPLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVIKTNIVNDRGIHICKSML 175

Query: 180 S-VFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVK- 234
           + + W   +         D   G Y   + KH  +E+A+  +  + +   EE      K 
Sbjct: 176 AWLKWGNGETPETSGKKGDHLIGDYYVAFDKHYREEIAELKAQYMKDGMDEEAATEKAKV 235

Query: 235 ------------------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                             D  V+A+ + +         +  K + +  D    E + +  
Sbjct: 236 EAPLIKEAHEMLVKWENNDPEVRALWQKMNNWVYAGFDETYKMMGVSFDKIYYESNTYLE 295

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +     +G  +                 D   +    T  G D  + LL+SD
Sbjct: 296 GKKKVEEGL----EKGLFFRK---------------DDNSVWADLTNEGLD-QKLLLRSD 335

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 336 GTSVYMTQDIGTADLRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSY 395

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            +    +G   KM  R G  +    ++ E                             VG
Sbjct: 396 GMVELPNG---KMKSREGTVVDADDLMAEMIKDARQTSDELGKFKDMSEEERQEISRIVG 452

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A     ++  +
Sbjct: 453 LGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKAAAEGIEIPAE 511

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
           L        ++  +  E+ LI  + ++   + +A     P  +A Y Y+L   F+  +  
Sbjct: 512 LGA------DAPINEKEIDLIQKMNDFAAAVADAGNNYNPGGIANYCYELTKEFNQFYHD 565

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A +    + RL L   VA I+ +G++++G+E P  M
Sbjct: 566 ------YSILNAESEAEKITRLVLAANVAKILKNGMSLLGIEVPERM 606


>gi|228471836|ref|ZP_04056609.1| arginine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276989|gb|EEK15684.1| arginine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 596

 Score =  339 bits (869), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 122/637 (19%), Positives = 235/637 (36%), Gaps = 108/637 (16%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            L+N +K I     +    ++ + I++ R    G   T     L + +  +P  I E + 
Sbjct: 7   LLENTIKGISSLYGIA---MENVEIQQTRKEFEGDY-TLVLFPLLKHIKANPQEIGEKLG 62

Query: 70  ARIKIDPDVDSVFIA-----GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
             +      +   I       KGF+NL +  +Y    L  I        + +      V 
Sbjct: 63  DYLSSHALWEGQPIVSGYNVVKGFLNLSICENYFLHFLHQIAPEKDYGKKPITKDSPAVI 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVF 182
           +E+ S N   P+H+GH R  ++G ++A ++  +G +V +   IND G  I    +A  +F
Sbjct: 123 VEYSSPNTNKPLHLGHIRNNLLGFSMAKIIEATGKKVYKTQIINDRGIHICKSMIAWQLF 182

Query: 183 WRYQQAL-YNNDSDLPEGYYPGVYLKHVGKELA---------DKYSSE------------ 220
            + +         D   G Y  ++ K   +E+A         ++   E            
Sbjct: 183 GKGETPESTGEKGDKLVGKYYVLFDKAYKEEIAGLISAGKTKEEAEREAPIFLKAQEMLR 242

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           L    + + L + +    Q +          L +  D    E + +       +DI+   
Sbjct: 243 LWEQGDPETLALWRQ-MNQWVYDGFEVTYHNLGVSFDRNYYESETYLLG----KDIVQRG 297

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +G  Y                 +   +    T  G D ++ +L+SDG+  Y   DL  
Sbjct: 298 LDEGVFYRK---------------EDGSVWIDLTAEGLD-EKLVLRSDGTSVYITQDLGT 341

Query: 341 FKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
              + E  F     MIY +G++   + K L  +   +    A+    L   +    +G  
Sbjct: 342 ATKRIEEDFPKVEGMIYTVGNEQDYHFKVLFLILQKLGYTWAKNLYHLSYGMVELPNG-- 399

Query: 398 IKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLW 428
            KM  R G  +    +++E                             +G  ++++ +L 
Sbjct: 400 -KMKSREGTVVDADDLMEEMVQVAQELSQELGKLEGYSDQQKEQLYRVIGLGALKYYILK 458

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + + F+  +  +  + N   ++QY YAR +SI R+A+               +P+ 
Sbjct: 459 VDPKKKIAFNPQESIDF-QGNTGPFIQYTYARIQSILRRAETCE------------LPKS 505

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                 E +LI  L+ +P V++NA     P  +A Y+YDL   F+  + +      +  +
Sbjct: 506 VSLHPKEKELIKLLSLFPEVVQNAADTYSPALIANYVYDLVKEFNSFYQN------VSIL 559

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +     +R+ L   V  +I  G +++G+E P  M
Sbjct: 560 GEEDTDKRSLRVHLSRKVGEVIAIGFDLLGIEVPERM 596


>gi|313887236|ref|ZP_07820931.1| arginine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923327|gb|EFR34141.1| arginine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 604

 Score =  339 bits (869), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 121/629 (19%), Positives = 231/629 (36%), Gaps = 69/629 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L+   S  + + L  +   + +     D I +   R    GH+ T       +     
Sbjct: 1   MSLYRQLSEAIASTLHTL-YGLTITA---DEITLTATRPEFEGHM-TLVVFPYLKASHKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   AE I A+++   D+ + +   KGF+NL L+ +     L  I  +          + 
Sbjct: 56  PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDTVWISALREIAETPRYGHITPTAQS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA ++  SG+ V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS------ELLNFPEEKWLPIVK 234
            + R+        S     +  G Y     KE   + +       +  +   E    ++ 
Sbjct: 176 -WLRWGNGETPESSGKKGDHLIGDYYVRFDKEYRAELAQIRAAHPDWSDEEVEAKSQLMA 234

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           D + Q + +  + D +   +   +            S +    D +  +   Y       
Sbjct: 235 D-ARQMLRQWEQGDPEVRALWRQMNEWVYKGFDETYSRMGVSFDKIYYESDTYLVGREEV 293

Query: 295 KSKTTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
                +      +   +       G D  + LL+SDG+  Y   D+   K +Y+    D 
Sbjct: 294 LRGLKEGLFERHEDGSVWADFEAEGLDK-KILLRSDGTSVYITQDIGTAKLRYQDFPIDQ 352

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           M+YV+G++   + + L  +   +  K  + +      +V L       KM  R G  +  
Sbjct: 353 MVYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPNG----KMKSREGTVVDA 408

Query: 411 RHVVDE----------------------------------VGSDSVRFMMLWRKNSELLD 436
             ++D                                   VG  ++++ +L     + + 
Sbjct: 409 DDLMDAMRDTALEVARTAQQAKGVELAAEPTAEELRTAEMVGLGALKYFILKVDPRKNMM 468

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F+  +  +    N   ++QY YAR  S+ ++A ++             +         E 
Sbjct: 469 FNPEESIDF-NGNTGPFIQYTYARICSLLQKADEMGYKHQLPEGGTLALSS------YET 521

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L +YP V++ A  +  P ++A Y YDL   ++  +           ++  +  L 
Sbjct: 522 ALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYHEC------SVLREEDEALR 575

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
            MRLQL   VA  I+S + ++G+  P  M
Sbjct: 576 SMRLQLSKTVAETIHSAMGLLGIALPERM 604


>gi|12045239|ref|NP_073050.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660405|ref|ZP_05405814.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351172|sp|P47618|SYR_MYCGE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3844966|gb|AAC71605.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079023|gb|ABY79641.1| arginyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 537

 Score =  339 bits (869), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 152/581 (26%), Positives = 262/581 (45%), Gaps = 57/581 (9%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           LK  +  +  K   +K+++  +     ++ +    S+     L          IA+ IV 
Sbjct: 8   LKECISALKLKFDDQKELVKLV-----KNNSFNGFSSTIIFQLKSENHKK---IADSIVE 59

Query: 71  RIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
               +   +  +VFIA   FIN  +S     + L                K  K+ IE V
Sbjct: 60  WFLKNKKDNYQNVFIANNNFINFQISYQKYLEYLIKT--------PCFTKKNIKILIESV 111

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           SANPTG +H+GH R A  GD L +L    GY    EY++ND G Q    + SV+   Q  
Sbjct: 112 SANPTGRIHLGHVRIAFFGDVLNNLAKLLGYTTVCEYWVNDYGQQARVFSFSVYQSLQLK 171

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY---SVQAMMKII 245
                   P   Y G+ +  +  E+ + +  + LNF E      +  +     Q ++ +I
Sbjct: 172 KNIAIQQHP-DGYSGIVIDKIASEI-ENFPVDNLNFEEFCKTSFLDHFLVNCTQKVLSLI 229

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + DL  +++  D +  E +  +   +   D+++ L    Y Y+                 
Sbjct: 230 KSDLNKIHVFIDSWKFESEIVKK--TNFNDLLEQLKPNSYFYQ----------------- 270

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L  ++T+ GDD DR L++SD   +YF  D+AY   K +RGFD +  V G+DH G++K
Sbjct: 271 DNALWLKTTLYGDDKDRVLIRSDKRASYFGTDVAYHLEKLQRGFDILFNVWGTDHEGHIK 330

Query: 366 RLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           R+     A+ +  K  + +   +LV LY++   +++SKRAG+ IT+  ++  +  D+ R+
Sbjct: 331 RMYCAFDALKNTTKTSLKIFALQLVTLYKNKELVRLSKRAGNVITIETMLSMISEDAARW 390

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ML + N  ++  D      Q+  NPV+YVQYA+AR  SI R A             + +
Sbjct: 391 FMLSQNNGTIIKIDLDIANLQNSANPVYYVQYAFARMNSILRIAN--------SDQLKEI 442

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +  E+ L+  L  YP +++ A    E + L  +LY+ AS+FH  +        
Sbjct: 443 TDCSLLINEKEISLLNQLVYYPFMLQKAMETGELHLLTNFLYETASLFHSWY------KV 496

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +     N  L+  RL L+ ++  I+   L+++ + +P +M
Sbjct: 497 CKINDDKNSLLSAQRLALLRSLQFIVKQILDVLKISTPQQM 537


>gi|298374553|ref|ZP_06984511.1| arginine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298268921|gb|EFI10576.1| arginine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 597

 Score =  338 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 119/633 (18%), Positives = 234/633 (36%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +     ++        ++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEQQITGAIIAGIKELYGADVTASQVQLQKTKKEFKGHL-TLVVFPFLRMSKKSPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    + F   KGF+NL ++ S    +L+SI          +  +   V IE
Sbjct: 62  EIGEYLLRNEPAVAEFNVIKGFLNLTVACSCWIDLLNSINEQPAYGIIPVTEQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +G ++ +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSKIMKANGNQIVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADK-------YSSELLNFPEEKWLPI 232
                  +     +  G +       LK     L  K        +   L     + L  
Sbjct: 181 NGATPESTGKKGDHLIGDFYVLFSNKLKEETHALEAKGLTKEEAEAQSTLMAEAREMLRK 240

Query: 233 VK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +  D  V+A+ +++         +  K + +  D    E   +          +     
Sbjct: 241 WEAGDKEVRALWEMMNNWVYAGFNETYKMMGVDFDKIYYESQTYLEGKGK----VMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D ++ LL++DG+  Y   D+   K
Sbjct: 297 KGIFYR---------------REDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFGKGLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  S+++ +L     
Sbjct: 398 SREGTVVDADDLMAEMISTAREISQELGKLNEMTPEEAENIARIVGLGSLKYFILKVDPR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    L         +P      
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEQGITL------PEQLPLTFAIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A+Y  +++ A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEENLIQMIADYAEIVKEAGKLYSPACVANYIYDLVKEYNQFYHD------FPILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L   RL L   VA I+ SG++++G+E P  M
Sbjct: 565 PELKNFRLVLSANVAKIVKSGMDLLGIEVPERM 597


>gi|212697346|ref|ZP_03305474.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675795|gb|EEB35402.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 535

 Score =  338 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 128/570 (22%), Positives = 229/570 (40%), Gaps = 76/570 (13%)

Query: 49  AAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIV 106
            A+   + L  +P  IA+ +   + K D    S   +   ++N Y+   YL+ ++L  I+
Sbjct: 9   LALFWQKKLRKNPAIIAKELKEDLEKEDSPYFSKVDSLNAYLNFYIDRKYLQDQVLREII 68

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                YGR+ +GKG  + ++F S N   P H+GH R  V+GD + ++  F GY      Y
Sbjct: 69  KEKENYGRSDMGKGKNIVLDFSSVNIAKPFHIGHIRSTVIGDAIRNIHDFLGYNTIASNY 128

Query: 167 INDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY-----PGVYLKHVGKELADKYSSE 220
           I D G Q   +  +   W     L  N        Y          + +  E  D++   
Sbjct: 129 IGDYGTQFGIMIAAYKLWGDDDKLNQNPIKELLNLYVRYNEQASNDQDMMNEARDEFRR- 187

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
            L   EE+ + +   +   +  +  R   K L+I  D +  E          I D++D L
Sbjct: 188 -LEEGEEEAVRLWSWFKEISFKEFYRV-YKLLDINFDNYHGE----AYQSKYIPDVLDQL 241

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +  + E       S   Q  D+ +  L              ++KS+GS  Y   D+A 
Sbjct: 242 EEKNLLTE-------SDGAQIIDLSKYDL----------PPAIIIKSNGSSAYITRDIAT 284

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK---------------------- 377
              + +   F   +YV+ +  + + ++L A+   +                         
Sbjct: 285 AINRKKTYDFSENLYVVATQQNLHFQQLWAILELMGYDFYKECKHIPFGMVSLKDQTLST 344

Query: 378 -KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K Q+ V L +++    D     M  R      L      VG  +V+F  L+    +   
Sbjct: 345 RKGQV-VFLEDVLNKAIDKTKEIMKDRDSALENLDETAQIVGIGAVKFQELYNNRIKDYV 403

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSE 495
           FD+  +     E    YVQY+YAR +S+ ++ + D F  ++FDL   +           E
Sbjct: 404 FDWDNLLNFEGE-TGPYVQYSYARAKSVLKKGQIDNFDKVEFDLLNTD----------EE 452

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             LI  LAE+   I  A    EP  ++  + D+A  F+  ++  +       +  ++ KL
Sbjct: 453 FNLIKSLAEFKESIVRAKEKYEPSIISRKVMDIAKNFNKFYNTSK-------IMVDDEKL 505

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L +A + +I +GL ++G+++ ++M
Sbjct: 506 KEQRLALAYATSIVIKNGLKLLGIKTVDQM 535


>gi|302802969|ref|XP_002983238.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii]
 gi|300148923|gb|EFJ15580.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii]
          Length = 536

 Score =  338 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 117/565 (20%), Positives = 207/565 (36%), Gaps = 83/565 (14%)

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  IA+ I         V++  +AG GFIN+ LS  Y+ K L+ +++ GI+    ++ 
Sbjct: 15  RNPREIAQSITRNFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHGIDTWAPVL- 73

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +  ++F S N    MHVGH R  ++GD LA+++ +   EV R  ++ D G Q   L 
Sbjct: 74  PVKRAIVDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGDWGTQFGMLI 133

Query: 179 LSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIV 233
             +F  +       D    DL   Y          +E   K    ++     + K+    
Sbjct: 134 EYLFEMFPNWEDIGDQAIGDLQAFYKESKVRFDADEEFKAKAQQAVVKLQSGDAKYRAAW 193

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K      +  I R++ + +  +  + + E      +P  I D I  L  +G + E     
Sbjct: 194 K-----ILCNISRNEFQQVYDRLKVSLEEKGESFYNPY-IPDAIQILRDKGILEES---- 243

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
                      D   ++F   + G  +    +K DG + Y + DLA    +      + +
Sbjct: 244 -----------DGATVIF---VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEKVEWI 289

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGD-FI 408
           IYV       +       A        +       +   + L  DG   +   R G   +
Sbjct: 290 IYVTDVGQHQHFDMFFKAAKRAEWLPKEGYPRTQHVGFGLVLGTDGK--RFRTRQGTGLV 347

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            L  ++DE                             VG  +V++  L         F F
Sbjct: 348 RLVDLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRETNYTFSF 407

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ +  + N   Y+ YAYAR RSI R++     +L  +                E  L 
Sbjct: 408 EQMLD-VRGNTAVYLLYAYARIRSIIRKSGKSIDELKENGAIV-------LTHPDERALG 459

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L ++  V+E+A     P  L  YLY+L+  F   ++  +       V  +  +    R
Sbjct: 460 LFLIQFSEVVEDAVTRLLPNTLCEYLYNLSENFTRFYTSCK-------VNGSPEE--TSR 510

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           L L  A A ++     ++G+     
Sbjct: 511 LLLCEATAIVMKQCFKLLGITPLER 535


>gi|294666099|ref|ZP_06731357.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604113|gb|EFF47506.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 354

 Score =  338 bits (867), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 112/378 (29%), Positives = 186/378 (49%), Gaps = 30/378 (7%)

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             +  D     +    +   L  ++ ++V  +      DL A  +  DI+  E   ++  
Sbjct: 5   AGDTVDLEGHLVTGTKDPADLEAIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK-- 62

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + + +  L   G+ YE                +   L  +ST  GDD DR + KSDG
Sbjct: 63  DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKSDG 106

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCE 387
           +YTYF  D+AY   K++RG++  I  +G+DH G + R+ A   A+     +     +L +
Sbjct: 107 TYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQ 166

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +V + R G  +K+SKRAG ++TLR +++E  +D+VR+ ++ RK    L FD    + QS 
Sbjct: 167 MVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQSN 226

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NPVFYVQYA+AR  S+ RQA++     D       +       D   L +++ L+ YP 
Sbjct: 227 DNPVFYVQYAHARVCSVLRQAQEKGYKYDQ---AHGLAELACLDDEHSLAVMLELSRYPE 283

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+E A  A EPY++A YL +LA  FH  + + +       V  +       +L L  A  
Sbjct: 284 VVEIAGQALEPYQIAQYLRELAHAFHTWYHNSK-------VLVDAAAERDAKLTLAVATQ 336

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +GL ++GV +P +M
Sbjct: 337 QVLANGLELLGVSAPEKM 354


>gi|255714653|ref|XP_002553608.1| KLTH0E02816p [Lachancea thermotolerans]
 gi|238934990|emb|CAR23171.1| KLTH0E02816p [Lachancea thermotolerans]
          Length = 645

 Score =  338 bits (867), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/624 (21%), Positives = 239/624 (38%), Gaps = 90/624 (14%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +    ++N++     KI      L    +E       G L      +  R  G +P  +A
Sbjct: 68  NVVDLMRNFISVELSKISGVDTQLIYPALEWTNTLERGDLLIPVPRL--RIKGSNPKDLA 125

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVN 124
                +  +   +  V   G  F+  +  P +L K+ L  I+    EYG   + +  KV 
Sbjct: 126 TEWAEKFPLGNFLTKVEANGP-FVQFFFKPDFLFKVVLPDILTRKEEYGSAPLVQNKKVV 184

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           IEF S N   P H GH R  ++G  L++L    G++V R  Y+ D G Q   LA+    +
Sbjct: 185 IEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKMGWDVVRLNYLGDWGKQFGVLAVGFERY 244

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK---HVGKE------------LADKYSSELLNFPEEK 228
             ++AL  +    P  +   VY++    +  E             A  Y  ++ +  +E 
Sbjct: 245 GDEEALSKD----PIKHLYDVYVRVNQDITAEGDSLPEDKSTDGQARAYFKKMED-GDEN 299

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I K +   ++ K I D    LNI++D +  E    R     ++  +D    +G  +E
Sbjct: 300 ALKIWKRFRELSIEKYI-DTYARLNIKYDSYSGESQASR---ESMQLALDMFREKGLTHE 355

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER 347
                           DR  LL   T     + +  + KSDG+  Y   D+     ++++
Sbjct: 356 ----------------DRGALLIDLTKFNKKLGKTIVQKSDGTTLYMTRDVGTAMDRHKK 399

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCEL 388
             FD MIYV+      Y  +L  V   +    A+                    V L  +
Sbjct: 400 YNFDKMIYVIACQQDLYTAQLFEVLKQLGFGWAKDLQHVNFGMVQGMSTRKGTVVFLDNI 459

Query: 389 VRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +   ++ M   M      +        V D VG  +V    +  K     +F + ++   
Sbjct: 460 LEETKEKMHEVMKTNKAKYAQIENPDEVADLVGISAVMIQDMQAKRINNYEFKWERMTSF 519

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVH 501
            + +   Y+QYA++R RS+ R A +I  +     DF L            + + + L+  
Sbjct: 520 -EGDTGPYLQYAHSRLRSVERNASEITQEKMVNADFSLL----------HEPAAVLLVRL 568

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA+YP V+ NA    EP  +  YL+ L       +        + +V     +L   RL 
Sbjct: 569 LAQYPDVLRNAIKTHEPATVVTYLFKLTHQVSSCYD-------VLWVAGQTPELAAARLA 621

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L  +   ++ +G+ ++G+   + M
Sbjct: 622 LYASARQVLYNGMTLLGLTPVDRM 645


>gi|260944172|ref|XP_002616384.1| hypothetical protein CLUG_03625 [Clavispora lusitaniae ATCC 42720]
 gi|238850033|gb|EEQ39497.1| hypothetical protein CLUG_03625 [Clavispora lusitaniae ATCC 42720]
          Length = 621

 Score =  338 bits (867), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 120/559 (21%), Positives = 221/559 (39%), Gaps = 80/559 (14%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKV 123
           A  I    K    +  V   G+ F+  +     L   ++   +    +YG   +G G K+
Sbjct: 105 ASEIATAFKTGGYLSEVKAEGQ-FLQFFFDKKCLFNLVIKDTLTRKTDYGYLPLGVGKKI 163

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF S N   P H GH R  ++G  L++L   +G++VTR  Y+ D G Q   LA+    
Sbjct: 164 IIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKAGWDVTRINYLGDWGKQFGLLAVGFEK 223

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK---------HVGKELADKYSSELLNFP--EEKWLPI 232
              ++    D   P  +   VY+K          V     DK  +        +E+ L +
Sbjct: 224 YGDESKLETD---PINHLFEVYVKVNKDITDEGDVEGGTNDKARAYFKRMEDGDEEALKM 280

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            + +   ++ K + D    LNI++D++  E    +     ++++I     +G V+E    
Sbjct: 281 WRKFRDLSIEKYV-DTYSRLNIKYDVYSGESQVSQ---ESMKNVIKLFGEKGLVHE---- 332

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFD 350
                       DR   L   T     + + L+ KSDG+  Y   D+     +YE+  FD
Sbjct: 333 ------------DRGAKLIDLTKFNKKLGKCLVEKSDGTSLYLTRDVGEAMKRYEQFHFD 380

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRLY 392
            MIYV+ S    +  +   +   +    A+                    V L  ++   
Sbjct: 381 KMIYVIASQQDLHTAQFFEILKQMGFDWAKNLEHVNFGMVQGMSTRKGTVVFLDNILEET 440

Query: 393 RDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +D M   M K    +  +     + D +G  +V    +  K     +F + ++    + +
Sbjct: 441 KDKMHEVMKKNETKYAQIEDPEKIADLIGVSAVMIQDMQSKRINNYEFKWERMLSF-EGD 499

Query: 450 PVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
              Y+QYA++R  S+ R+A    +   + +FDL            +   +Q++  LA+YP
Sbjct: 500 TGPYLQYAHSRLSSVQRKAGISEEKLKEANFDLLT----------EPCAVQMVRVLAQYP 549

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +I+ A    EP  +  YL++L  +    +        + +V     +L   RL L  A 
Sbjct: 550 DIIKKALKTSEPSTIVTYLFNLTHLVSTCYD-------ILWVAGQEEELATARLALYAAA 602

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +G+ ++G+     M
Sbjct: 603 KQVLYNGMVLLGLTPVERM 621


>gi|302345955|ref|YP_003814308.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150153|gb|ADK96415.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 606

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 120/642 (18%), Positives = 240/642 (37%), Gaps = 101/642 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++         ++   +     I +++ R    G+L T     L +     P   A+
Sbjct: 3   IEEQITVAALAAVKELYGTEVPEKMIQLQKTRSDFEGNL-TLVTFPLLKTSRKKPEDTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K +    + F   KGF+NL ++ +   ++L+ I        + +  +   V IE
Sbjct: 62  DLGEYLKKNCKAVADFNVVKGFLNLVIAQAAWTELLNDINADEKFGEKRVTDESPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFP-------------E 226
             +    +     +  G +        K   K+L ++Y  E L                +
Sbjct: 181 NGITPEQAGKKGDHLIGDFYVLFDKHYKEECKQLQEQYEKEGLTAEEAKEKAEHEAPLIK 240

Query: 227 EKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           E    +VK    D  ++A+ + +         +  KAL +  D    E + +      + 
Sbjct: 241 EAHDMLVKWEANDPEIRALWEKMNNWVYAGFDETYKALGVGFDKIYYESNTYLVGKKKVE 300

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           + +     +G                    +   +    T  G D  + LL+ DG+  Y 
Sbjct: 301 EGL----AKGLF---------------IRKEDNSVWADLTNEGLD-QKLLLRKDGTSVYM 340

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   + ++ +   D MIYV+G++ + + + L  +   +  K  +  V     +    
Sbjct: 341 TQDIGTAEMRFNDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELP 400

Query: 394 DGMPIKMSKRAGDFITLRHVV------------------------------DEVGSDSVR 423
           +G   KM  R G  +    +V                                VG  +++
Sbjct: 401 NG---KMKSREGTVVDADDLVASMIENAKSLSEDKVNKLEGITEEEKNEIARIVGMGALK 457

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  +  +    N   ++QY YAR RSI R+A+     L   L    
Sbjct: 458 YFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAQNITLPASLND-- 514

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               ++  +  E+ LI  L ++   +  A I   P  +A Y Y+L   F+  +       
Sbjct: 515 ----DAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A+     + RL +   VA +I +G+ ++G+E P  M
Sbjct: 566 -YSILNADTEAEKITRLMIAKNVAKVIKNGMALLGIEVPERM 606


>gi|124486323|ref|YP_001030939.1| arginyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166232802|sp|A2STL6|SYR_METLZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|124363864|gb|ABN07672.1| arginyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 558

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/572 (23%), Positives = 230/572 (40%), Gaps = 69/572 (12%)

Query: 41  AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLR 99
            H  L++  +  L++    +P  IA  +VA +   P+   + I+ KG +IN      Y+ 
Sbjct: 29  DHADLASTVSFALAKTQRKNPAVIAGELVAVLSAKPEAKGIEISAKGPYINFIFGGDYVA 88

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           + + +           L  +  KV IE  SANP GP+HVGH R  V+GDTL      +GY
Sbjct: 89  ESVHAARRED---YGTLPARTDKVIIEHTSANPNGPLHVGHIRNTVIGDTLVRAFRKAGY 145

Query: 160 EVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            V  +YY+ND G QI  +A  V    Y +       +    +Y         K   +   
Sbjct: 146 PVEAQYYLNDMGRQIAIVAWGVQNLHYDRIPGEKGDEYIVRHYVEANKIAKAKPEIEPEF 205

Query: 219 SELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             L+   E      VK +  SV      I++ L ++N+ HD F+ E  F       ++D+
Sbjct: 206 DLLMEKIEAGDPETVKLFHDSVDICADGIKETLSSMNVVHDKFVRETTF--LWNGSMQDV 263

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++ + +                      + + +    +  G      L +S+G+  Y A 
Sbjct: 264 LNRIEK----------------LPIVHHEGQMMYLDLSDEGFGNRYVLRRSNGTSVYAAR 307

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           DLA+   K     D  I V+G+DH     +L+     + E+     ++  E V L    M
Sbjct: 308 DLAFHLWK-NAQCDRSIDVLGADHKLIGAQLQTTLKLIGERPP--EIVHFEFVSLPEGSM 364

Query: 397 PIK-------------MSKRAGDFIT----------LRHVVDEVGSDSVRFMMLWRKNSE 433
             +               KRA + +T             +   V   +VR+ ++     +
Sbjct: 365 TTRGGVFITADELIAETKKRAMEEVTVRRPELGEDEREKIAKAVAVGAVRYDIVKVSAEK 424

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              FD+ +  +  +++   Y+QYA+AR  SI  +AK      +   +           D 
Sbjct: 425 STVFDWKEALDFERQS-APYIQYAHARACSIMEKAKAEGGFAECYEYS----------DP 473

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            EL L  H+A +P V+E       P+ LA Y+ DLA +F+  +   R  P L+       
Sbjct: 474 YELALAKHIARFPYVLEKVVCELRPHLLATYVRDLADLFNSFY---RFAPVLK----AEG 526

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   RL LV A  + +   L ++G+E+   M
Sbjct: 527 NVRDARLTLVDACRNTLYQALGVLGIEALESM 558


>gi|126273989|ref|XP_001387368.1| arginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126213238|gb|EAZ63345.1| arginyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 603

 Score =  337 bits (865), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 127/615 (20%), Positives = 232/615 (37%), Gaps = 77/615 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +     +NY+     ++    + +    ++ P     G L      +  R  G++P   A
Sbjct: 31  NIIDVFRNYITNELHRVSDVDQEIIFSALDSPNTLDKGDLIVPVPRL--RLKGVNPKDKA 88

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
                + +    +  V   G  F+  + + + L   ++   +    EYG   +G   KV 
Sbjct: 89  VEWSEKFEKGKFLSEVKAEGP-FLQFFFNKTLLYNLVIGDALARKTEYGALPLGLNKKVI 147

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +EF S N   P H GH R  ++G  L++L   +G+ VTR  Y+ D G Q   LA+  F R
Sbjct: 148 VEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKAGWNVTRINYLGDWGKQFGLLAVG-FER 206

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHV-----------GKELADKYSSELLNFPEEKWLPIV 233
           Y        +  P  +   VY+K               E A  Y  ++ +  EE  L I 
Sbjct: 207 Y--GSEEKLASDPINHLFEVYVKINQDITAEGETSPTNEAARLYFKKMEDGDEEA-LKIW 263

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K +   ++ K I D    LNI +D++  E    +        I +    +G ++E     
Sbjct: 264 KRFRELSIEKYI-DTYARLNIHYDVYSGESQVPKELMKMATKIFE---EKGLIHE----- 314

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDN 351
                      DR   L   T     + + L+ KSDG+  Y   D+     +Y    FD 
Sbjct: 315 -----------DRGAKLIDLTKFNKKLGKTLVEKSDGTSLYLTRDVGEAMKRYNTYKFDK 363

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRLYR 393
           MIYV+ S    +  +   V   +  +  +                    V L  ++   +
Sbjct: 364 MIYVIASQQDLHCAQFFEVLKQMGFEWVKNMEHVNFGMVLGMSTRKGTVVFLDNILEETK 423

Query: 394 DGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + M   M      +  +     + D VG  +V    +  K     +F + ++    + + 
Sbjct: 424 EKMHEVMKANEAKYAQIEDPDKIADLVGISAVMIQDMQAKRINNYEFKWDRMTSF-EGDT 482

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYA++R  S+ R++     DL            +   +     LI  LA+YP  I+
Sbjct: 483 GPYLQYAHSRLSSVQRKSGYTEEDL-------ATANYDLLVEPCAANLIRTLAQYPDTIK 535

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP  +  YL++L  +    +        + +V    ++L + RL L  +   ++
Sbjct: 536 KALKTHEPSTIVTYLFNLTHIVSQCYD-------ILWVAGQEKELAVARLALYASAKQVL 588

Query: 571 NSGLNIIGVESPNEM 585
            +G+ ++G+   + M
Sbjct: 589 YNGMTLLGLTPVDRM 603


>gi|255012560|ref|ZP_05284686.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 597

 Score =  337 bits (865), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 119/633 (18%), Positives = 234/633 (36%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +     ++        ++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEQQITGAIIAGIKELYGADVTASQVQLQKTKKEFKGHL-TLVVFPFLRMSKKSPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    + F   KGF+NL ++ S    +L+SI          +  +   V IE
Sbjct: 62  EIGEYLLRNEPAVAEFNVIKGFLNLTVACSCWIDLLNSINEQPAYGIIPVTEQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +G ++ +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSKIMKANGNQIVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADK-------YSSELLNFPEEKWLPI 232
                  +     +  G +       LK     L  K        +   L     + L  
Sbjct: 181 NGATPESTGKKGDHLIGDFYVLFSNKLKEETHALEAKGLTKEEAEAQSTLMAEAREMLRK 240

Query: 233 VK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +  D  V+A+ +++         +  K + +  D    E   +          +     
Sbjct: 241 WEAGDQEVRALWEMMNNWVYAGFNETYKMMGVDFDKIYYESQTYLEGKGK----VMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D ++ LL++DG+  Y   D+   K
Sbjct: 297 KGIFYR---------------REDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFGKGLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  S+++ +L     
Sbjct: 398 SREGTVVDADDLMAEMISTAREISQELGKLDEMTPEEAENIARIVGLGSLKYFILKVDPR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    L         +P      
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEQGIVL------PEQLPLTFAIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A+Y  +++ A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEENLIQMIADYAEIVKEAGKLYSPACVANYIYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L   RL L   VA I+ SG++++G+E P  M
Sbjct: 565 PELKNFRLVLSANVAKIVKSGMDLLGIEVPERM 597


>gi|302380344|ref|ZP_07268814.1| arginine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311834|gb|EFK93845.1| arginine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 564

 Score =  337 bits (865), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 124/607 (20%), Positives = 238/607 (39%), Gaps = 72/607 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +K  +   D  +  E++I D  +IE P +   G  +      L++        IA
Sbjct: 3   NFKDEVKKIILGFDTGL-TEEEISD--LIEIPPNSDMGDYAFPV-FKLAKTFRKASNLIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +  +   + ++  +   G  ++N +++ S L + + +  +   ++G + IG G  V  
Sbjct: 59  EELAQKAFENENIKKIANVGP-YVNFFVNNSKLVESVLTEAIKD-DFGSSHIGVGKNVVF 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-LSVFWR 184
           +F S N   P H+GH R  V+G+ + ++M + G+  T   YI D G Q   +    + W 
Sbjct: 117 DFSSTNIAKPFHIGHLRSTVIGNAIRNIMKYQGFNTTGVNYIGDYGTQFGMMISAYLKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMM 242
            +  +  N        Y          E     + +  +  E+K    VK +S   +  +
Sbjct: 177 DEDKINANPIKELLNLYVKYNKIAKEDETYMDEARDWFDKLEKKDPTAVKLWSWFREISL 236

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  +     L ++ D F  E          I D ++ + ++  + E       S      
Sbjct: 237 KEFQRVYDLLGVKFDNFNGESF----HSQFIGDALEAIDKKNLLEE-------SDGAMII 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           ++D + L              + KS+GS TY   D+A    + +   F   +YV+ S   
Sbjct: 286 NLDDENL----------PPVLIKKSNGSSTYLTRDIATAMYRKKTYDFYKNVYVVASQQK 335

Query: 362 GYVKRLEAVAAAVSEK-KAQINVLLCELVRL---------------------YRDGMPIK 399
            + ++L AV   +          +   +V +                       D     
Sbjct: 336 LHFEQLRAVLKKMGFDWWKDCEHVSFGMVSMKDGSMKTREGKVIFLEDVLNRAIDKTKSI 395

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + +R  +      V  +VG  +V F  L+    +   FD+ +V     E    Y QY +A
Sbjct: 396 IEERNPNIENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE-TGPYTQYTFA 454

Query: 460 RCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           R  SI  + + ++  +  FDL            D +E+ ++ HL+++  V+ NAT   EP
Sbjct: 455 RSCSILDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFEEVLLNATEKYEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  Y  +LA +F+  +++         +     +L   RL L ++V   +   L+++G
Sbjct: 505 SFLTRYTVELAKLFNKFYANC-------PINTVEDELKYQRLYLTYSVNKCLKLSLSLLG 557

Query: 579 VESPNEM 585
           +E+P  M
Sbjct: 558 IEAPVRM 564


>gi|262382533|ref|ZP_06075670.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301308226|ref|ZP_07214180.1| arginine--tRNA ligase [Bacteroides sp. 20_3]
 gi|262295411|gb|EEY83342.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300833696|gb|EFK64312.1| arginine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 597

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 119/633 (18%), Positives = 234/633 (36%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +     ++        ++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEQQITGAIIAGIKELYGADVTASQVQLQKTKKEFKGHL-TLVVFPFLRMSKKSPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    + F   KGF+NL ++ S    +L+SI          +  +   V IE
Sbjct: 62  EIGEYLLRNEPAVAEFNVIKGFLNLTVACSCWIDLLNSINEQPAYGIIPVTEQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +G ++ +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSKIMKANGNQIVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADK-------YSSELLNFPEEKWLPI 232
                  +     +  G +       LK     L  K        +   L     + L  
Sbjct: 181 NGATPESTGKKGDHLIGDFYVLFSNKLKEETHALEAKGLTKEEAEAQSTLMAEAREMLRK 240

Query: 233 VK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +  D  V+A+ +++         +  K + +  D    E   +          +     
Sbjct: 241 WEAGDKEVRALWEMMNNWVYAGFNETYKMMGVDFDKIYYESQTYLEGKGK----VMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D ++ LL++DG+  Y   D+   K
Sbjct: 297 KGIFYR---------------REDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFGKGLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  S+++ +L     
Sbjct: 398 SREGTVVDADDLMAEMISTAREISQELGKLDEMTPEEAENIARIVGLGSLKYFILKVDPR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    L         +P      
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEQGIAL------PEQLPLTFAIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A+Y  +++ A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEENLIQMIADYAEIVKEAGKLYSPACVANYIYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L   RL L   VA I+ SG++++G+E P  M
Sbjct: 565 PELKNFRLVLSANVAKIVKSGMDLLGIEVPERM 597


>gi|169824560|ref|YP_001692171.1| arginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831365|dbj|BAG08281.1| arginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 564

 Score =  336 bits (862), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 123/607 (20%), Positives = 237/607 (39%), Gaps = 72/607 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +F   +K  +   D  +  E++I D  +IE P +   G  +      L++     P  IA
Sbjct: 3   NFKDEVKKIILGFDTGL-TEEEISD--LIEIPPNSEMGDYAFPV-FKLAKTFRKAPNLIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +  +   + ++  +   G  ++N +++ S L + + +  +   ++G + IG G  V +
Sbjct: 59  EELAKKDFENENIKKIANVGP-YVNFFVNNSKLIESVLTEAIKD-DFGSSHIGVGKNVVL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-LSVFWR 184
           +F S N   P H+GH R  V+G+ + ++M    +  T   YI D G Q   +    + W 
Sbjct: 117 DFSSTNIAKPFHIGHLRSTVIGNAIRNIMKHQDFNTTGVNYIGDYGTQFGMMISAYLKWG 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMM 242
            +  +  +        Y          E     + +  +  E+K    VK +S   +  +
Sbjct: 177 DEDKINADPIKELLNLYVKYNKVAKEDEAYMDEARDWFDKLEKKDPTAVKLWSWFREISL 236

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  +     L ++ D F  E          I D ++ + ++  + E       S      
Sbjct: 237 KEFQRVYDLLGVKFDNFNGESF----HSQFIGDALEAIDKKNLLEE-------SDGAMII 285

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           ++D + L              + KS+GS TY   D+A    + +   F   +YV+ S   
Sbjct: 286 NLDDENL----------PPVLIKKSNGSSTYLTRDIATAMYRKKTYDFYKNVYVVASQQK 335

Query: 362 GYVKRLEAVAAAVSEK-KAQINVLLCELVRL---------------------YRDGMPIK 399
            + ++L AV   +          +   +V +                       D     
Sbjct: 336 LHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDVLNRAIDKTKSI 395

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + +R  +      V  +VG  +V F  L+    +   FD+ +V     E    Y QY +A
Sbjct: 396 IEERNPNLEHKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE-TGPYTQYTFA 454

Query: 460 RCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           R  SI  + + ++  +  FDL            D +E+ ++ HL+++  V+ NAT   EP
Sbjct: 455 RSCSILDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFDEVLLNATEKYEP 504

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  Y  +LA +F+  +++         +     +L   RL L + V   +   L+++G
Sbjct: 505 SFLTRYTVELAKLFNKFYANC-------PINTVEDELKYQRLYLTYCVNKCLKLSLSLLG 557

Query: 579 VESPNEM 585
           +E+P  M
Sbjct: 558 IEAPVRM 564


>gi|188994229|ref|YP_001928481.1| arginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691463|sp|B2RHN9|SYR_PORG3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188593909|dbj|BAG32884.1| arginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 597

 Score =  336 bits (862), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 114/614 (18%), Positives = 230/614 (37%), Gaps = 54/614 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L+N        +     +  +I +++ +    GHL T       +     P   A 
Sbjct: 3   ILQKLENSAAAAVKALYGTDPMEGQIQLQKTKREFKGHL-TLVVFPFVKMSRKSPEATAT 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    S     KGF+NL ++P    ++L+ I        +        V +E
Sbjct: 62  EIGEWLLANESAVSAIEVVKGFLNLTIAPRVWLELLNEIRADINFGHKVATEDSPLVMVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +GY V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSEIMKANGYRVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMK 243
             +    +     +  G +     K    + +   +E  +  E +    +   + + +  
Sbjct: 181 DGVTPEKAGKKGDHLIGDFYVLFDKHYKAELNSLMAEGKSKEEAEAASTLMAEAREMLRL 240

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
               D K +++   +     D        +    D +  +   Y            +   
Sbjct: 241 WEAGDEKVVDLWRTMNQWVYDGFEATYKMMGVDFDKIYYESETYLVGKEEVLRGLEEGLF 300

Query: 304 MD--RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
           +      +    T  G D ++ LL++DG+  Y   D+   K ++ +   + MIYV+G++ 
Sbjct: 301 VKHSDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAKMRFNDYPINRMIYVVGNEQ 359

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + + L  +   +  +  +  V     +    +G   KM  R G  +    ++DE    
Sbjct: 360 NYHFQVLSILLDRLGFEFGKGLVHFSYGMVELPEG---KMKSREGTVVDADDLMDEMIRT 416

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  S+++ +L     + + F+  K       N  
Sbjct: 417 AAEIAAEAGKAAEKDEEESREVARIVGLGSLKYFILKVDPRKNMTFNP-KESIDFNGNTG 475

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            +VQY YAR RS+ R+A+    D+       + +P +      E  LI  ++EY  V+  
Sbjct: 476 SFVQYTYARIRSLMRRAEAAGYDI------PSQLPTDLPLSEKEEALIQKVSEYAEVVSE 529

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A  +  P  +A Y+YDL   ++  +           ++  + ++   RL L   VA  + 
Sbjct: 530 AGRSYSPALIANYIYDLVKEYNQFYHD------FSVLKEEDERIRAFRLALSEVVALTMR 583

Query: 572 SGLNIIGVESPNEM 585
            G  ++G+E P  M
Sbjct: 584 KGFALLGIEMPERM 597


>gi|218264603|ref|ZP_03478391.1| hypothetical protein PRABACTJOHN_04097 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221889|gb|EEC94539.1| hypothetical protein PRABACTJOHN_04097 [Parabacteroides johnsonii
           DSM 18315]
          Length = 597

 Score =  336 bits (862), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 115/633 (18%), Positives = 237/633 (37%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +     ++       +++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEQQITGAIITGIKELYGADVTANQVQLQKTKKEFKGHL-TLVVFPFLRMSKKSPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +       + F   KGF+NL ++ +    +L+ I          +  +   V IE
Sbjct: 62  EIGEYLLRHEPAVAEFNVIKGFLNLTIACACWIDLLNGINGQPSYGIVPVTEQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSEIMKANGNKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK----YSSELLNFPEEKWLPIVK-------- 234
             +    +     +  G +      +L ++     +  +     E   P++         
Sbjct: 181 NGVTPETAGKKGDHLIGDFYVLFSNKLKEETAALEAKGMTKEEAEAASPLMAEARDMLRK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  K + +  D    E   +      + + +D    
Sbjct: 241 WEAGDKEVRALWEMMNNWVYAGFDETYKMMGVNFDKIYYESQTYLEGKGKVLEGLD---- 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D ++ LL++DG+  Y   D+   K
Sbjct: 297 KGIFYR---------------REDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFGKGLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    +++E                             VG  S+++ +L     
Sbjct: 398 SREGTVVDADDLMEEMVGTAREISQELGKMDEMTPEEAENIARMVGLGSLKYFILKVDPR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    L         +P  +   
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEQGIVL------PEQLPTTTTIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A+Y  V+  A     P  +A Y YDL   ++  +           ++  N
Sbjct: 511 EKEENLIQMIADYASVVREAGKEYSPALIANYTYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++   RL L   VA I+ S ++++G+E P  M
Sbjct: 565 EEVKEFRLVLSANVAKIVKSAMSLLGIEVPERM 597


>gi|321309631|ref|YP_004191960.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801475|emb|CBY92121.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 557

 Score =  336 bits (862), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 138/553 (24%), Positives = 248/553 (44%), Gaps = 40/553 (7%)

Query: 37  PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
            +D   G + TN A  +S     +P  + E ++ ++     V S  +   GFIN++ SP 
Sbjct: 33  TKDYKFGDIFTNFACRISSKYKKNPKDVGEELLKQVGELKYVSSAKVEKNGFINIFFSPE 92

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              +  S I+    +  R          +E VSANPTG +H+GH R  +  DTLA+L+ +
Sbjct: 93  IFSEYYSEILEKREDIWRKHPINSWYF-VEIVSANPTGLLHIGHARNGIFSDTLANLLEY 151

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELA 214
            GY V REY +N+ G QI  L  S++ +Y+  L     +S+     Y G  +      L 
Sbjct: 152 GGYFVHREYLVNNLGNQIKELLESIWIKYKAKLTSIPRESNTKVVKYNGKEIDECVDYLI 211

Query: 215 DKYSSELL---NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
             +    +   N  E K  P ++   V   +  I  DL   NI+ + +  E  F   +  
Sbjct: 212 STHGQRWIFDRNIFESKSYPELEKLVVSYFLNEIEKDLARYNIEVNAWKFESSFVNDES- 270

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGS 330
            I D+  ++                       +    + F++  + D   D  L+K+DG 
Sbjct: 271 -INDLFKSMKEY------------------LRVKDGAIWFKAGEILDGCKDEVLIKNDGK 311

Query: 331 YTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +TY+  DL Y   K         +I ++GSDH G++ +L+A          +++ +  +L
Sbjct: 312 HTYYCQDLIYHLYKLSLLGNEGKIINILGSDHYGHIDKLKAFLKLKEVDDDRVHFICMQL 371

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V+L      +K+SKR    I LR +++ +  +  R+ ++ +     L+ D  ++K+++  
Sbjct: 372 VKLMEHSTLVKISKRDSKVIYLRDLMNYMTYEEARWFLVSQHPDSPLEIDIQRLKQKNYN 431

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NP FYV YAY+R   I R+  +       D + +  +  ++  D  E  ++  L ++  V
Sbjct: 432 NPAFYVMYAYSRIFQILRKHGEP------DFYSKKEVLFKTITDGIEKTIMNTLMQWDEV 485

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  A    +PY++  YL+ LA  FH  +   +        + +  +    RL L++A   
Sbjct: 486 IHEAIETLQPYRITQYLFKLAKEFHSFYEETKLLQ-----EGHEEEWLRDRLALLNAAKY 540

Query: 569 IINSGLNIIGVES 581
            I+SGL+I+ ++ 
Sbjct: 541 TIHSGLSILKIKP 553


>gi|154491896|ref|ZP_02031522.1| hypothetical protein PARMER_01523 [Parabacteroides merdae ATCC
           43184]
 gi|154088137|gb|EDN87182.1| hypothetical protein PARMER_01523 [Parabacteroides merdae ATCC
           43184]
          Length = 597

 Score =  336 bits (861), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 115/633 (18%), Positives = 238/633 (37%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +     ++       +++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEQQITGAIITGIKELYGADVAANQVQLQKTKKEFKGHL-TLVVFPFLRMSKKSPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +       + F   KGF+NL ++ +    +L+ I          +  +   V IE
Sbjct: 62  EIGEYLLRHEPAVAEFNVIKGFLNLTIACACWIDLLNEINGQPSYGIIPVTEQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +G +V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSEIMKANGNKVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK----YSSELLNFPEEKWLPIVK-------- 234
             +    +     +  G +      +L ++     +  +     E   P++         
Sbjct: 181 NGVTPETAGKKGDHLIGDFYVLFSNKLKEETAALEAKGMTKEEAEAASPLMAEAREMLRK 240

Query: 235 ----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
               D  V+A+ +++         +  K + +  D    E   +      + + +D    
Sbjct: 241 WEAGDKEVRALWEMMNNWVYAGFDETYKMMGVDFDKIYYESQTYLEGKGKVLEGLD---- 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D ++ LL++DG+  Y   D+   K
Sbjct: 297 KGIFYR---------------REDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFGKGLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    +++E                             VG  S+++ +L     
Sbjct: 398 SREGTVVDADDLMEEMVGTAREISQELGKVDEMTPEEAENIARMVGLGSLKYFILKVDPR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    L         +P  +   
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEQGIVL------PEQLPTTTTIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI+ +A+Y  V+  A     P  +A Y YDL   ++  +           ++  N
Sbjct: 511 EKEENLILMIADYASVVREAGKEYSPALIANYTYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++   RL L   VA I+ S ++++G+E P  M
Sbjct: 565 EEVKEFRLVLSANVAKIVKSAMSLLGIEVPERM 597


>gi|150010178|ref|YP_001304921.1| arginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166232818|sp|A6LHY5|SYR_PARD8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149938602|gb|ABR45299.1| putative arginyl-tRNA synthetase [Parabacteroides distasonis ATCC
           8503]
          Length = 597

 Score =  336 bits (861), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 118/633 (18%), Positives = 234/633 (36%), Gaps = 92/633 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +     ++        ++ +++ +    GHL T       R     P   A+
Sbjct: 3   IEQQITGAIIAGIKELYGADVTASQVQLQKTKKEFKGHL-TLVVFPFLRMSKKSPEQTAQ 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    + F   KGF+NL ++ S    +L+SI          +  +   V IE
Sbjct: 62  EIGEYLLRNEPAVAEFNVIKGFLNLTVACSCWIDLLNSINEQPAYGIIPVTEQSPLVMIE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ ++  +G ++ +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSKIIKANGNQIVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVY-------LKHVGKELADK-------YSSELLNFPEEKWLPI 232
                  +     +  G +       LK     L  K        +   L     + L  
Sbjct: 181 NGATPESTGKKGDHLIGDFYVLFSNKLKEETHALEAKGLTKEEAEAQSTLMAEAREMLRK 240

Query: 233 VK--DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +  D  V+A+ +++         +  K + +  D    E   +          +     
Sbjct: 241 WEAGDKEVRALWEMMNNWVYAGFNETYKMMGVDFDKIYYESQTYLEGKGK----VMEGLE 296

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y                 +   +    T  G D ++ LL++DG+  Y   D+   K
Sbjct: 297 KGIFYR---------------REDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAK 340

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +    +G   KM 
Sbjct: 341 LRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFGKGLVHFSYGMVELPEG---KMK 397

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  +    ++ E                             VG  S+++ +L     
Sbjct: 398 SREGTVVDADDLMAEMISTAREISQELGKLDEMTPEEAENIARIVGLGSLKYFILKVDPR 457

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   ++QY YAR RS+ R+A +    L         +P      
Sbjct: 458 KNMTFNP-KESIDFNGNTGPFIQYTYARIRSVLRKAAEQGIVL------PEQLPLTFAIS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  LI  +A+Y  +++ A     P  +A Y+YDL   ++  +           ++  N
Sbjct: 511 EKEENLIQMIADYAEIVKEAGKLYSPACVANYIYDLVKEYNQFYHD------FSILREEN 564

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +L   RL L   VA I+ SG++++G+E P  M
Sbjct: 565 PELKNFRLVLSANVAKIVKSGMDLLGIEVPERM 597


>gi|317127046|ref|YP_004093328.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471994|gb|ADU28597.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 561

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/620 (22%), Positives = 253/620 (40%), Gaps = 94/620 (15%)

Query: 1   MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M +   F+  L  +LKE  +  +  ++       +IE+P+    G L+      LS+ L 
Sbjct: 1   MNMKEMFADALMPHLKETPLTSEQVLQ-------LIEKPKYENLGDLAF-PCFQLSKLLR 52

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLI 117
             P  IA  I  +++    + SV + G  ++N++     + K +   V++ G  YG N +
Sbjct: 53  KSPAIIANEIAEKLQ-SSSISSVEVKGA-YVNVFFDKVLVGKAIIDKVIARGTSYGSNDV 110

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV I+F S N   P  +GH R  V+G+ LA++   +GYE  +  ++ D G Q   L
Sbjct: 111 NSRGKVVIDFSSPNIAKPFSMGHLRSTVIGNALAAIAEKNGYESVKINHLGDWGTQFGKL 170

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-DY 236
             +        L+ N+ ++ E   P +   +V      +    L+      +  +   D 
Sbjct: 171 ITAY------KLWGNEEEVRENTIPTLLKLYVQFHEEAEKDPTLVEEGRRSFQKLENGDQ 224

Query: 237 SVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              A+ K  R + LK  N  + +     D  +G+      +                  +
Sbjct: 225 EAVALWKWFRNESLKEFNKVYTLLGVTFDAVQGESYYNEHM-------------EEVVKE 271

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            +  +  +     L+     + DD+   L+ K+DG+  Y   DLA  K + E   F   +
Sbjct: 272 LEEKEILEESDGALVV---TLNDDMPPCLIQKNDGTTLYATRDLAAAKFRKETYDFVKCL 328

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           Y++G +   + ++L  V   + E+ A  +++      + +DG   KMS R G  + L  V
Sbjct: 329 YIVGGEQQLHFQQLFQVLQIMDEEWAA-DMVHIPFGLILKDGK--KMSTRKGKVVLLEEV 385

Query: 414 VDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           + E                         VG  +V F  L  +    ++F+  ++     E
Sbjct: 386 LQEAINKTKQNIIDKNPLLDNIDDVAKQVGVGAVIFHDLKNERIGNVEFNLDQMLTFEGE 445

Query: 449 NPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
               YVQY  AR  ++  +AK     F  LD DL                 ++I  L ++
Sbjct: 446 -TGPYVQYTIARGNTLLAKAKTKQHSFKGLDGDLS---------------WEVIKLLEQF 489

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P VIE A  A EP  +A Y+  LA  F+  + +      ++ +Q +  K    RL L  +
Sbjct: 490 PAVIERAFTAYEPSIVAKYVIKLAQAFNSFYGN------VKILQED--KHQESRLALTQS 541

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  ++  GL ++G+++P +M
Sbjct: 542 VTIVLTEGLRLLGMQAPEKM 561


>gi|323457135|gb|EGB13001.1| hypothetical protein AURANDRAFT_18800 [Aureococcus anophagefferens]
          Length = 584

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 114/589 (19%), Positives = 204/589 (34%), Gaps = 84/589 (14%)

Query: 39  DCAHGHLSTNAAMILSRPLGLD-------PLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           + A G    NA M + + L  +       P  + E I A +  +  + S  +A  GFIN 
Sbjct: 28  NAAFGDYQCNAPMGIFKTLKANGVARLPSPRAVGEAIAAAVPANGVLKSASVAPAGFINA 87

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           ++  S L      +  SG+     L   G   KV ++F S N    MHVGH R  ++GDT
Sbjct: 88  HVEESLLSAHAQRVAASGVAAPPPLSAFGGARKVLVDFSSPNIAKEMHVGHLRSTIIGDT 147

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +  ++ F G++V R  ++ D G Q   L   +   Y   L N  +               
Sbjct: 148 ICRVLEFCGHDVRRVNHVGDWGTQFGMLITHMEEAYPDFLQNPPN--------------- 192

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             +L   Y +    F E++    V   +V A+                I+    D  R +
Sbjct: 193 ITDLTTFYKNAKKRFDEDEQFKEVSRKTVVALQAGDAR-------CRAIWSVLCDISRKE 245

Query: 270 PSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL 324
              +   +D  +   G  Y   + P      +   +         +F   + G      +
Sbjct: 246 FDKVYARLDVKVEEFGESYYNAMIPGAIGLLEDAGLVNAESGAACVF---LPGHSFPLII 302

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            KSDG Y Y + D+A    +    G + ++YV     + +       A A     A  +V
Sbjct: 303 RKSDGGYGYDSTDMAAIHHRLRTLGVEWVVYVTDLGQAEHFHMCFEAARAAKWDDASAHV 362

Query: 384 LLCELVRLYRDGM-PIKMSKRAGDFITLRHVVDE-------------------------- 416
            L  +      G    +   R+G+ + L  ++D                           
Sbjct: 363 RLHHVGFGVVQGEDGKRFKTRSGETVRLVDLLDASVERMEKSLSDRVAEGKCALPPAEVK 422

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                +G  +V++  L +  S    F + K+   S  N   Y+ +A+AR  SI  +A++ 
Sbjct: 423 RAAAAIGYGAVKYFDLHQHPSTNYKFSYDKMLSTS-GNTAVYLLFAHARLASIVAKARET 481

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                        +         E  L   L ++  V+ +      P ++  YLY +A+ 
Sbjct: 482 RKVDAKAAAAGAALVLTQ--HAKERALAFELTQFAEVVLSVADDFLPVRICDYLYKIATK 539

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           F    +  +           +      RL L  A   ++    +++G+ 
Sbjct: 540 FTEFVTECKVL---------DDPRMAERLVLCEATGVVMRKCFDLLGIT 579


>gi|84996665|ref|XP_953054.1| arginyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304050|emb|CAI76429.1| arginyl-tRNA synthetase, putative [Theileria annulata]
          Length = 632

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 131/661 (19%), Positives = 240/661 (36%), Gaps = 117/661 (17%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDC-------AHGHLSTNAAMILSRPLG- 58
           +   ++ Y++E+     + K     IV E  +           G    + AM L +    
Sbjct: 5   YKPIIQQYVRELLSS-AISKCSTSEIVQEFAKHPNVCVAKQKFGDYQWSDAMSLFKAAKD 63

Query: 59  ----LDPLTIAELIVARIKIDPDVDSVFIAGK-----------GFINLYLSPSYLRKILS 103
                 P  +AE++   I  +                      GF+   LS  ++ + + 
Sbjct: 64  HLSVNSPKELAEMVKNNISSNSFSSINVSPQGNKYQNKTNMWIGFMTFVLSNDWIEQEIR 123

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
           S+   G    ++    G  V I+F S N    MHVGH R  V+GD+LA ++ F GY+V R
Sbjct: 124 SLAKYGPSVDKSTEKHGETVVIDFSSPNIAKEMHVGHLRSTVIGDSLARVLEFFGYKVRR 183

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
             ++ D G Q   L   +F +Y   L N  + SDL + Y        V +E   K  S +
Sbjct: 184 INHLGDWGTQFGMLIEYMFEKYPDFLNNMPSISDLTKFYKEAKLRMDVDEEFKKKSRSRV 243

Query: 222 LNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           +     ++   +V        ++      K L+I  +IF  E  ++      I +I+ +L
Sbjct: 244 VRLQSGDEESKLVWKVLCDISLESFNRIYKRLDINFEIF-GESFYN----DMIPEIVKDL 298

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +G   E                    L+  +      V   L+KSDG + Y + DLA 
Sbjct: 299 QDRGIAQES----------------EGALVIFTDASS--VPLMLVKSDGGFGYDSTDLAC 340

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVR-------L 391
            + + ++   D +IYV     S +  +L   A      +  +I+ +   +V+        
Sbjct: 341 IRYRTQQLKADWIIYVTDIGQSEHFLKLFKSAQIAGWCENVRIDHVGFGMVQNEFGEKFK 400

Query: 392 YRDGMPIK---------------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            R G  +K               + KR  +   L  + + +G  S+++  L    +    
Sbjct: 401 TRSGDTVKLVDLLDEAVKRSKIELEKRDPNIPNLDEIAEALGYGSIKYFDLNHSVTTNYK 460

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDT 493
           F F K+ +  + N   Y+ Y+YAR   IF++A+      P+   D    N  P+ S+ + 
Sbjct: 461 FSFDKMLD-PRGNTAVYMFYSYARICQIFKKAQSKTSSNPETSGDHAETNPNPENSDDNP 519

Query: 494 S------------------------------ELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                                          E+ L   L ++P +++         +L  
Sbjct: 520 EVNGEDNLLVNEKSTVVDDVKLSKLVIEHPTEVALGKCLLKFPSILDQIHKDLAINRLTD 579

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YLY+L+  F   ++  +              +   RL L      ++ +   +IG++   
Sbjct: 580 YLYELSVQFSSFYTKCKVVG---------DPMQESRLILCSCTKDVMRTCFQLIGIKPLE 630

Query: 584 E 584
            
Sbjct: 631 R 631


>gi|225010550|ref|ZP_03701021.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005379|gb|EEG43330.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 595

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 125/640 (19%), Positives = 233/640 (36%), Gaps = 100/640 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       + + +++I        K L  +     R    G + T     L + +  +
Sbjct: 1   MNVLPLIEKTVLSGVEKIF------GKQLSSVEFVPTRKDFEGDI-TVVVFSLLKEIKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I   I   ++        F   KGF+N+  +  +     +  ++    YG       
Sbjct: 54  PEVIGNQIGTYLQEQLKEVKSFNVVKGFLNISFTDRFFLSAFTDALLD-TSYGTVKEKDP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L+
Sbjct: 113 HAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAKILEASGKKVYKTQIINDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------------YSSELLNFPEEK 228
            + ++        + L      G Y     K    +             + +     +E 
Sbjct: 173 -WEKFGHGETPESTGLKGDALVGKYYVAFDKAYKAEVAALIAGGLEQSEAEKSTMLLQEA 231

Query: 229 WLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              +++    D  V A+ K +         +  K L +  D +  E D +       +DI
Sbjct: 232 QEMLIRWESGDAGVVALWKKMNAWVYKGFEETYKRLGVSFDSYYYESDTYLLG----KDI 287

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     QG  ++                +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 288 VAKGLDQGVFFKK---------------EDGSVWIDLTEEGLD-EKIVLRSDGTAVYMTQ 331

Query: 337 DLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     +       + M+Y +G++   + K L  +   +    AQ    L   +     
Sbjct: 332 DIGTAIQRVADYSDVNGMVYTVGNEQDYHFKVLFLILKKLGFSWAQQLFHLSYGMVDLPS 391

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    ++ E                             +G  ++++ 
Sbjct: 392 G---KMKSREGTVVDADDLITEMTATAESISEDLGKLSGYTQEQKTALYETIGLGALKYY 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + FD  K     + N   ++QY YAR +SI R+A     D D  + P +  
Sbjct: 449 ILKVDPKKRILFDP-KESVDFQGNTGPFMQYTYARIQSILRKA-----DFDTSVVP-DFE 501

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            QES     E+ L+  L  +P  I+ A     P  +A Y YDL   F+  + +      +
Sbjct: 502 RQESFLHEKEVALLKQLFLFPETIQLAAHNYSPALVANYTYDLVKAFNSFYQN------V 555

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  +N +L + R+ L   VA +I   L ++G+E P  M
Sbjct: 556 SILGESNEELKVFRVGLSRKVAQVIQDALGLLGIEVPERM 595


>gi|301114575|ref|XP_002999057.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262111151|gb|EEY69203.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 815

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 118/626 (18%), Positives = 227/626 (36%), Gaps = 86/626 (13%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
            +     S     +K     + V    + R  +   ++   G    N+AM +   L    
Sbjct: 232 NILEVVESLFDAAIKAAYPGLDVPPVEVTRTNV---KNAKFGDYQCNSAMSIFTALKGTP 288

Query: 59  ---LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
                P  +A  I+A +     +D + +AG GFIN +L+  ++   L +++ +G++    
Sbjct: 289 NAARSPRDVANTIIAAMPETRVLDRLTVAGAGFINAFLTKEFVAARLQNVLANGVQ---P 345

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              K   + ++F S N    MHVGH R  ++GDT++ ++ F GY+V R  ++ D G Q  
Sbjct: 346 APQKKQTIVVDFSSPNIAKDMHVGHLRSTIIGDTMSRILEFQGYDVKRINHVGDWGTQFG 405

Query: 176 TLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLP 231
            L   +   Y   +    N +DL + Y           +  ++  ++  LL   +E    
Sbjct: 406 MLICHLTETYPTWETEMPNVTDLTKLYKAAKERFDADADFHERSKAQVVLLQSGDENSRK 465

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +      + + +I R + + +  +  + ++E      +P  I D++  L  +G V     
Sbjct: 466 VW-----ETLCEISRREFQKVYDRLGVSLNEMGESFYNP-IIPDVLAKLRAKGIV----- 514

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFD 350
                      +M     +  +          L+KSDGSY Y   D+A    + +E   D
Sbjct: 515 -----------EMSNGAEVVFTKAFKQPF--MLVKSDGSYLYDTTDIAALWYRLHEMKAD 561

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +IY        +   L  V                       D    +   R+G  + L
Sbjct: 562 RIIYYTDYTQKDHFSLLFEVGRMSGIYDPTKQRADHVGFGTVNDESGKRFKTRSGKTVRL 621

Query: 411 RHVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             ++DE                               +G  +V++  L +  +    F F
Sbjct: 622 VELLDEAKVRMKAQLVERIEAGQTSLPMDQVDAAAEKLGYGAVKYFDLRQSPTSNYIFSF 681

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQL 498
            ++   +  +   Y+ +AYAR  SI R++      L   L    NV+  E     +E  L
Sbjct: 682 DRMLS-TNGDTAVYLMFAYARLSSIIRKSGVDMSALVAQLQKEGNVLKPEH---PTEQAL 737

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + L +   VI          +L  YLY ++                R + +        
Sbjct: 738 AIELLQLQDVIVFINKDLSSNRLCSYLYTISEKVQTF------VTACRVLGSEE---QNS 788

Query: 559 RLQLVHAVASIINSGLNIIGVESPNE 584
           RL L  A   ++ +  +++G++  ++
Sbjct: 789 RLLLCDATLKVMKTCFSLLGIDPLDQ 814


>gi|313127564|ref|YP_004037834.1| arginyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293929|gb|ADQ68389.1| arginyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 584

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 135/629 (21%), Positives = 255/629 (40%), Gaps = 91/629 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +  S +++ ++     + +     D + +E P +     L+++ A  ++  +G  P 
Sbjct: 1   MFRELRSEVEDAVEAALSSLDLPT---DDLGVEEPPEDVPATLASSVAFRMASEVGAPPP 57

Query: 63  TIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  I   I   P    +     G  ++N ++S +Y  + L +       +   L   G
Sbjct: 58  KVAADIADAIDATPYTYLERAEPQGP-YVNFFVSDAYYAETLEAGRDEEYGH---LPETG 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE  SANPTGP+HVG  R  ++GD +A ++ F+G +V R YY+NDAG Q+     +
Sbjct: 114 KDVVIEHTSANPTGPVHVGRARNPILGDAIARVLEFAGNDVDRHYYVNDAGRQVAVFTWA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---------ELADKYSSELLNFPEEKWLP 231
                +  L   + D  +      Y K             E A+   +E++   E     
Sbjct: 174 YETFDESELPEPERDRSDYDLVRYYRKGNAYLEDADEDEVEAAEAEIAEIMQGLEAGDEE 233

Query: 232 IVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +  +  V  ++  +R+ L+ L    D FI E  F R   +   D+++ L    Y    
Sbjct: 234 TYERVAVVVDQVLGGMRESLERLPAFFDEFIKETKFIRNGDA--DDVVERLKDSEYAVY- 290

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                          +        +  G + +   L+SDG+  Y   DLA+ + K+   +
Sbjct: 291 ---------------EEDAWQLDLSEFGFEKNLVFLRSDGTTLYTTRDLAHHEWKFN-NY 334

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D  + V+G DH    ++L+A    +     Q+       V L   G    MS R G  + 
Sbjct: 335 DEAVTVLGEDHKLQAEQLDAALEILGNDTDQLRQTFYSWVNLPEGG----MSTRKGTGVD 390

Query: 410 LRHVVDE---------------------------------VGSDSVRFMMLWRKNSELLD 436
           L  ++DE                                 VG  +VR+ ++ ++ ++ + 
Sbjct: 391 LDDLLDESVKRAREEVEERLDSRIRDDDLDEEDIERIARQVGIGAVRYDIVSKQPTKGIT 450

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F++ +  +   ++   YVQY +ARC  I  +A     +   ++   +          +E 
Sbjct: 451 FEWERALDFEAQS-APYVQYVHARCCGILNEASAAGIEAATEMSLLDT--------EAEQ 501

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +L+  +A +P V+E A    EP+ +A Y+ + A  F+  +           + A++  + 
Sbjct: 502 ELLRVIARFPAVVEQAADDLEPHVVATYVREFAETFNTFYREC------SVLNADDDDIA 555

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL LV A    + + L ++G+E+P  M
Sbjct: 556 AARLGLVEAAQHTVANALYMLGIEAPESM 584


>gi|319760579|ref|YP_004124517.1| arginyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039293|gb|ADV33843.1| arginyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 582

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 117/618 (18%), Positives = 228/618 (36%), Gaps = 69/618 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + L  +L +   KI  E      I I        G    N  + +S+ L + 
Sbjct: 1   MNI----QNLLLQHLYQALLKINAES-FFHLIKIHISTHKQFGDYQINGLIPISKLLNIS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
               ++ ++  I +   V+ +     GFIN++LS +++   ++   +  +        + 
Sbjct: 56  VENFSKKLIKFINLQHMVEIIKFEQPGFINIFLSSTWIENQIN--YIGNLPNFGIYSKQQ 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + I++   N    MHVGH R  V+GD+ A +++F G+ V +  +I D G Q   L   
Sbjct: 114 KTIIIDYSGPNIAKEMHVGHLRSTVIGDSTARILSFLGHHVIKANHIGDWGTQFGMLIAY 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  +       N             +     + A K      NF +     +VK      
Sbjct: 174 IHKQIPHNFSLNKI-------QSFDVLEKYYQEAKKIYDIDPNFAKLARHYVVKLQQGDG 226

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             K I   L  +++ ++  +    ++R + +  +  I   +    +   I+   K+K   
Sbjct: 227 YCKKIWQHLVNISVSNNQKL----YNRLNITLKKSDIMGESMYQNMLPHIVRDLKNKKIA 282

Query: 301 KCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVM 356
               +   +        +        + K DG Y Y   D+A  K + E    D +IY  
Sbjct: 283 VTSNNATVVFLNKDQKNEYYSSFGVIIQKKDGGYLYSTTDIACIKYRCEILHADRIIYYT 342

Query: 357 GSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            S    ++ +   +A       K       +C ++ L ++  P +   RAG+ + L  ++
Sbjct: 343 DSRQKQHLLQAWKIAHKAGYIPKSVSFEHHICGMI-LQKNRKPFQ--TRAGNVLKLTTLL 399

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +E                           +   ++++  L +  S    F++  +     
Sbjct: 400 NEAFKKAHDLIYRKNPNLEDIKLNKLAHIISIGAIKYTELSKNRSTNYIFNWDTMLNF-N 458

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QYAY R  SI ++     P+L  + +   +I         E  L   L ++  
Sbjct: 459 GNTALYIQYAYTRIFSILKKTGQ--PNLKKNKYKIQIIT------KKEKLLATCLLQFNE 510

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           +IE       P+ L  YLY L+++F   +           ++  N  L   RL+L    A
Sbjct: 511 IIEIIADQGTPHLLCNYLYKLSALFSSFYES------YPILETKNIHLQHSRLKLSLFTA 564

Query: 568 SIINSGLNIIGVESPNEM 585
            I+  GL ++G+E+   M
Sbjct: 565 HILKQGLELLGIETSEYM 582


>gi|254382504|ref|ZP_04997863.1| arginyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341408|gb|EDX22374.1| arginyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 600

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 125/621 (20%), Positives = 218/621 (35%), Gaps = 59/621 (9%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S +   + +       E    D ++    R         N  + L++    +
Sbjct: 1   MASVPSLASSVNQRVADALVSALPEAGAADPLL----RRSDRADFQANGILALAKKAKAN 56

Query: 61  PLTIAELIVARIKIDPDVD---SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           P  +A  +V  I    + D    + ++G GF+N+ +S   + + L++        G    
Sbjct: 57  PRELATTVVGGIPTGGEGDVIREIEVSGPGFLNITVSDRAIIETLAARAGDD-RLGVPFS 115

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  I++   N    MHVGH R AV+G  +  ++ F+G +V R ++I D G Q   L
Sbjct: 116 PNAGTTVIDYAQPNVAKEMHVGHLRSAVIGAAMVEILEFTGEKVVRRHHIGDWGTQFGML 175

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +     +  +       +    G         L     +   +  E K     +   
Sbjct: 176 IQFLIEHPHELDHKAAGAEADIEVSGEEAMSNLNRLYKASRALFDSDEEFKTRARARVVD 235

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +QA         +    +  I+     F + D       +   +    +        +  
Sbjct: 236 LQAGDAETLAMWQRFVDESKIYFY-SVFDKLDMDIQDADVVGESGYNDMLTETCKLLEDS 294

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                      + F      D    PL+  KSD  + Y A DL+  + +        +IY
Sbjct: 295 GVAVRSNGALCVFFDEYKGPDGNPTPLIVQKSDSGFGYAATDLSAIRDRVGGLKASTLIY 354

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+ +  S + K +   A         +  V L     L +DG P K   R G+ + L  +
Sbjct: 355 VVDARQSLHFKMVFETARRAGWLNEDVQAVQLAFGTVLGKDGKPFK--TREGETVRLVDL 412

Query: 414 VDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           +DE                             VG  +V++  L    +    FD  ++  
Sbjct: 413 LDEAVDRATAVVREKAGKVGLSEAEIVENGRFVGIGAVKYADLSTSAARDYKFDLDQMVS 472

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            + +  V Y+QYAYAR RSI R+A +             V   E E   +E  L +HL +
Sbjct: 473 LNGDTSV-YLQYAYARIRSILRKAAEAGD-------RTPVAHPELELAPAERALGLHLDQ 524

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE-NPRLRFVQANNRKLTMMRLQLV 563
           +  +I  A     P+KLA YLY L+S+F   +       P    V   N      RL L 
Sbjct: 525 FGELIAEAAAEHAPHKLAAYLYQLSSLFTTFYDQCPVIKPEPELVVGEN------RLFLC 578

Query: 564 HAVASIINSGLNIIGVESPNE 584
              A  +  G++++G+ +P  
Sbjct: 579 DLTARTLTKGMSLLGIRTPER 599


>gi|126649241|ref|XP_001388293.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
 gi|126117131|gb|EAZ51231.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
          Length = 616

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 128/645 (19%), Positives = 229/645 (35%), Gaps = 102/645 (15%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG------LDP 61
            + +K+   E    +  E      I I  P     G    N+ M +             P
Sbjct: 5   QNIVKHAFNEAIKNLFPEFDKEAIIAISNP---NFGDYQCNSCMTIFSQFKGKLEGIKSP 61

Query: 62  LTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI------- 110
             I   I   I+ + D      S+ +A +GFI + LS  +++  LS +            
Sbjct: 62  RDIGMKIKDYIEKNGDLSINFKSIEVAPQGFITIKLSDEFIQNNLSKLQEMDEVKVTPTM 121

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++      K  KV ++F S N    MHVGH R  ++GDT   ++ + G+EV R  ++ D 
Sbjct: 122 KFHCKSGRKTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTCRILEYLGFEVLRVNHVGDW 181

Query: 171 GAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELA--DKYSSELLNFPE 226
           G Q   L   +   Y   + N    SDL E Y           +     + +  +L   +
Sbjct: 182 GTQFGMLIEYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVMLQGGD 241

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           +  L   K     + ++  +     L I+ + F  E  ++   P     ++  L  +G +
Sbjct: 242 QDALTAWKKICEVSRVEFQKI-YDRLGIRLEEF-GESYYNDMIPG----VVKMLDEKGIL 295

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-Y 345
                         K D   + +  +      ++    +KSDG Y Y + DLA    +  
Sbjct: 296 --------------KLDNGAQCVYTKIN----EIPLMAVKSDGGYGYDSTDLAAIHHRLI 337

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               D +IY        +  +L  VA  +         L      + +     K   R+G
Sbjct: 338 TLDADWVIYTTDMGQEEHFMKLFDVAETMGWHDPSNTRLFFIGFGVIQGEDGKKFKTRSG 397

Query: 406 DFITLRHVVDE----------------------------------------------VGS 419
           D + L  ++DE                                              +G 
Sbjct: 398 DVVKLTELIDEGVARAKKELVDRRNQRRSDQTNKSNTDVEVDHPNIDDSDLDLMANTIGH 457

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++++  L +       F F ++ +  K N   Y+ YAYAR  +IFR+ + I  D    +
Sbjct: 458 AAIKYFDLKQNRLTNYRFSFDRMLD-PKGNTAVYLLYAYARICAIFRKVEFIQSDNSMVI 516

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +    +    +  E +L + L  +P V +       P +LA Y Y+L+  F   ++  
Sbjct: 517 KQKVSNFKLKISNNVERKLSIQLLRFPEVFDGILNDFFPNRLADYCYELSECFAQFYTEC 576

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           R       +    ++L   RL L      I+  GL+++GVE+  +
Sbjct: 577 R------IIGLEEQQLEQSRLLLCFLTKQILLKGLDLLGVETLEK 615


>gi|89898642|ref|YP_515752.1| arginyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|109894981|sp|Q253D1|SYR_CHLFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|89332014|dbj|BAE81607.1| arginyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 562

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 132/618 (21%), Positives = 225/618 (36%), Gaps = 91/618 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L +  SS  +        +++          I +      GH   N AM L R L + 
Sbjct: 1   MTLLSYLSSLCREATLSAFPQVENPSPD-----ITQSTKEHFGHYQCNDAMKLDRTLKMA 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE IV  +  D +  SV +AG GFIN   S  +L++ L +            +   
Sbjct: 56  PRAIAEAIVNNLPKD-NFSSVEVAGAGFINFTFSKEFLKQRLETFSADLSSGFC--VKDP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ I+F S N    MHVGH R  ++GD LA + +F G +V R  +I D G     L   
Sbjct: 113 KKIVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFSFVGNDVLRLNHIGDWGTAFGMLITY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     + + N +                  +L   Y      F E+      K  S   
Sbjct: 173 LQEEASEDVGNLE------------------DLTALYKKAHARFAEDVE---FKKRSQAN 211

Query: 241 MMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDII-DNLARQGYVYEGILPPPKSKT 298
           ++ +   D  ALN+  H   ISE  F       I DI+   + ++G  +     P   + 
Sbjct: 212 VVALQSGDPSALNLWKHICEISERAFQ-----KIYDILGVAIEKRGESFYNPFLPEIIQD 266

Query: 299 TQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            +   +    D  + +F     G  +   + KSDG Y Y   DLA  + + E+   D +I
Sbjct: 267 LENKKLITVSDNAKCVF---HEGFSIPLMVQKSDGGYNYATTDLAAMRYRVEKDHADKII 323

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V     S + + LEA A A    + +          L  D    K   R+G+ I L+ +
Sbjct: 324 IVTDMGQSLHFQLLEATALAAGYLRDKETFSHVGFG-LVLDSEGKKFKTRSGENIKLKEL 382

Query: 414 VD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++                            +G +++++  L         F F K+  + 
Sbjct: 383 LNTAVDQAVATLKEHRPEMSEEEISQRAPILGINAIKYADLSSHRVSDYVFSFEKML-RF 441

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + N   ++ YAY R + I R+      +L+  +  +    +                 +P
Sbjct: 442 EGNTAMFLLYAYVRIQGIKRRLNIEKLNLEAVVNIQEPAEEALALALL---------RFP 492

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I+       P+ L  YLY L + F+  +                      RL L   V
Sbjct: 493 EAIDVTLKELCPHFLTDYLYMLTNKFNAFFRDCHI---------EGSPYQQERLYLCALV 543

Query: 567 ASIINSGLNIIGVESPNE 584
              + +G++++G+++ + 
Sbjct: 544 EKTLATGMHLLGLQTLDR 561


>gi|332521375|ref|ZP_08397831.1| arginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332043103|gb|EGI79301.1| arginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 595

 Score =  334 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 124/640 (19%), Positives = 232/640 (36%), Gaps = 100/640 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L    S  +K  LK            L+ +  +  R    G + T     + R +  +
Sbjct: 1   MNLQDTLSHHVKQALKTTYQAN------LETVEFQATRKEFAGDI-TVVVFPMLRVVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I E I   +  + +V   F   KGF+N+ +  +Y     + I     ++G       
Sbjct: 54  PVQIGETIGQYLIENVEVVKAFNVVKGFLNIEIEDAYYISFFNEIKADN-KFGYKTPDST 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + V +E+ S N   P+H+GH R  ++G +++ ++  SG +V +   IND G  I    L+
Sbjct: 113 SAVMVEYSSPNTNKPLHLGHVRNVLLGYSVSEIIKASGKKVYKTQIINDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + R+        + L      G Y     +E   +                       +
Sbjct: 173 -WKRFGNNETPESTGLKGDKLVGNYYVKFDQEYKKEIETLKAEGKTEEEAKKKAPILIEA 231

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            ++L   E     +V  +        K      + + +  D    E   +          
Sbjct: 232 QQMLQQWEAGEPEVVALWEKMNQWVYKGFNATYENIGVNFDKLYYESQTY---------- 281

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  + ++ EG+      KT      +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 282 ---LLGKEFIAEGL------KTGVFFKKEDGSVWCDLTSDGLD-EKIVLRSDGTAVYMTQ 331

Query: 337 DLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +     D M+Y +G++   + + L  +   +    A+    L   +     
Sbjct: 332 DIGTAIQRVKDFPDIDGMVYTVGNEQDYHFQVLFLILKKLGFDWAKNLFHLSYGMVDLPS 391

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    ++ +                             +G  ++++ 
Sbjct: 392 G---KMKSREGTVVDADDLITDMAETAQTISEELGKLDSYNEEEKNTLYKTIGLGALKYY 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + FD  K     + N   ++QY YAR +SI R+AK             N I
Sbjct: 449 ILKVDPKKRILFDP-KESIDFQGNTGPFIQYTYARIQSILRKAKANGT------VSLNAI 501

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
               +    E  LI  L  +P VI+NA     P  +A Y Y+L   F+  + +      +
Sbjct: 502 ESSFKLHEKEKTLIKQLQVFPEVIQNAAENHSPALVANYTYELVKDFNSFYQN------V 555

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + A+N+     R+QL  AV++ I +   ++G+  P  M
Sbjct: 556 SILGADNQTDKNFRIQLSQAVSNTIKNAFILLGITVPERM 595


>gi|303274520|ref|XP_003056579.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226462663|gb|EEH59955.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 654

 Score =  334 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 115/595 (19%), Positives = 215/595 (36%), Gaps = 96/595 (16%)

Query: 39  DCAHGHLSTNAAMILSRPLG-------LDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90
           + A G    N+AM +   L         +P ++AE I+  I   +   + + +AG GFIN
Sbjct: 102 NRALGDYQCNSAMKIFAELKDRGDTRFKNPRSLAEAIIQAIPAENSFFEKLAVAGPGFIN 161

Query: 91  LYLSPSYLRK---ILSSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPM---HVGHCR 142
           +  S  +L +    +      G         K    +  +++ S N    M   HVGH R
Sbjct: 162 ITFSREFLAQEALRVFHCSADGTFETTRKFRKLTAKRAVVDYSSPNIAKEMQEMHVGHLR 221

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++G+T+   + F G EV R  ++ D G Q   L L+      ++      +L E Y  
Sbjct: 222 STIIGETICRALEFVGVEVIRLNHVGDWGTQFGML-LAHLEDISESSDFEVKNLQELYKQ 280

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
                   ++   +  + +++   +     +K+     + ++ R D + +    D+ I E
Sbjct: 281 SKIRFDSDEDFKKRARAAVVHL--QAGDKHLKEKWTD-ICEVSRQDFEEIYRLLDVHILE 337

Query: 263 D--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
               ++      I D++  L  +    +                D    +F     G D 
Sbjct: 338 RGESYYNY---LIPDVLSELIEKEIAVQS---------------DGALCIFAD---GSDS 376

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK- 378
                KS+GS+ Y + DLA    +  +   D +IYV       +   +   A+     K 
Sbjct: 377 PLICRKSNGSFNYASTDLAALWQRISDLCADWIIYVTDVGQKKHFDAIFDAASRAGWLKR 436

Query: 379 ----AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416
                 ++ +   LV +  DG   +   R+GD + L+ ++ E                  
Sbjct: 437 ENGNVSLDHVGFGLV-MGVDGK--RFRTRSGDTVPLKSLLREAQSRCLDSLRGRESTLSD 493

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  +V++  L         F + ++ +  K N   Y+ Y +AR  S+  +
Sbjct: 494 DELEDASRIMGVAAVKYADLHNNRLTNYTFSYERMLDL-KGNTAVYLLYTHARISSLLER 552

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A         DL P + I      D  E  L + + ++P V+E+      P +L  Y Y 
Sbjct: 553 AHTQ------DLEPLS-INDLVLKDEFERVLALTIMKFPDVVESVVQDLLPSRLCDYTYS 605

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           L   F+  +         + +          R  L  A A  +    +I+G+E  
Sbjct: 606 LCVTFNEFYGSC------KVLGGEQE---RSRTFLCQATAISLRQCFHILGIEPL 651


>gi|312130430|ref|YP_003997770.1| arginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311906976|gb|ADQ17417.1| arginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 586

 Score =  334 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 121/639 (18%), Positives = 236/639 (36%), Gaps = 107/639 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++ ++  + EI           D++ ++  R    GH  T     L +     
Sbjct: 1   MNIELVLAAEIEKAVAEIFGHQ-------DKVTLQPTRKDFEGHY-TYVFFGLVKLARKS 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I +L+   +  +      +   +GF+NL L      ++       G++ G+N     
Sbjct: 53  PAEIGQLLGDYLIQNSPYVLSYTVVQGFLNLTLKDEAWIQVFR-----GVKEGQNPEASK 107

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R   +G ++A ++  +GYEVT+   +ND G  I   ++ 
Sbjct: 108 GNVLVEYSSPNTNKPLHLGHLRNNFLGYSVAEILKEAGYEVTKACLVNDRGIHICK-SMV 166

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + RY        S L   +  G Y     K    +    +     E+         V+A
Sbjct: 167 AYQRYGNGETPASSGLKGDHLVGKYYVEFDKHYKKEIEEWVAEGVSEEEAKKTAPILVEA 226

Query: 241 MMKIIRDD------------------------LKALNIQHDIFISEDDFHRGDPSPIRDI 276
              +++ +                         K + +  D    E D +       +DI
Sbjct: 227 QEMLVKWENGDAEIIELWKKLNGWVYEGFDFTYKTIGVNFDKTYYESDTYLLG----KDI 282

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++    +G  Y+                +   +    T  G D  + +L+ DG+  Y   
Sbjct: 283 VEEGLAKGVFYKK---------------EDNSVWIDLTDEGLD-HKLVLRGDGTSVYITQ 326

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL     K++    +  I+V+G++   + K L A+   +    A     L   +     G
Sbjct: 327 DLGTTDLKFQDFHSEKSIWVVGNEQDYHFKVLFAILKRLGRPYADGLYHLSYGMVDLPSG 386

Query: 396 MPIKMSKRAGDFITLRHVV-----------------------------DEVGSDSVRFMM 426
              KM  R G  +    +V                               V   ++++ +
Sbjct: 387 ---KMKSREGTVVDADELVSDMIATSKSITEEKGKTEGFSEGQLEELYRMVALGALKYYL 443

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L  +  + + F+  +  +  + N   ++QY +AR +SI R++      +  D+   N   
Sbjct: 444 LKVEPKKRMLFNPEESIDF-QGNTGPFIQYTHARIKSILRKSGKDQFPMPADITNVNA-- 500

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E+++I  L ++ ++I+ A     P  +A Y+Y+LA  F+  +S         
Sbjct: 501 -------EEIEVIFLLKDFRKIIDAAAAEYSPAVIANYVYELAKTFNVFYSRH------S 547

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   N  L   RL L+  VA +I  G+ ++G+E P +M
Sbjct: 548 VLNEENEVLKNFRLSLIEQVAEVIKKGMKLLGIEVPEKM 586


>gi|322383445|ref|ZP_08057225.1| arginyl-tRNA synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152246|gb|EFX45072.1| arginyl-tRNA synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 567

 Score =  334 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 125/582 (21%), Positives = 221/582 (37%), Gaps = 67/582 (11%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E P     G ++       S+ L   P            I  +      AG  +INL+
Sbjct: 24  VLEPPPSGDMGDVAF-PCFHASKLLRKPPAQ--IAAELAAAIHAEGVRAEAAGP-YINLF 79

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            +PS    +L   +++  E+G+  +G+G +V I+  S N   P  +GH R  V+G+ L +
Sbjct: 80  FTPSVYGDLLLQGMMN-PEFGKPDLGQGKRVIIDMSSPNIAKPFGIGHLRSTVIGNALYN 138

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDS-DLPEGYYPGVYLKHVG 210
           L   +G+E     ++ D G Q      +   W  ++ L  +   +  E Y          
Sbjct: 139 LYKETGFEPVSVNHLGDWGTQFGKQICAYKHWGSEEKLKADPIRESLELYVRFHEEAEQY 198

Query: 211 KELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            EL D+           ++    + +Y V+  +         L ++ D  + E  ++   
Sbjct: 199 PELEDEARGWFRKLETGDEDAKRLWEYFVKVSLNEFERMYDKLGVKFDHTLGESFYN--- 255

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              I  +I  L  Q  + E                     + R    G      + KSDG
Sbjct: 256 -DKIVPVIKALKEQNLLEES----------------DGAYVVRLDEEGMP-PCLITKSDG 297

Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  Y   DLA    +++    D ++YV+G +   + K++ AV   + +   +    +   
Sbjct: 298 TTIYPTRDLATAIYRHDVMKGDKLLYVVGGEQKLHFKQVFAVLGKLGKTWVESCEHVPFG 357

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVR 423
           +  +      KMS R G  ++L  V+ E                         VG  ++ 
Sbjct: 358 LMKFAGK---KMSTRRGRVVSLEEVLQEAVNRAREIIEEKNPLLPDKEHVAEAVGIGAIV 414

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F  L       +DF   +      E    YVQY +AR +S+  +A+  F   D      +
Sbjct: 415 FGDLKNNRVNEIDFSLDEALNFDGE-TGPYVQYTFARTQSVLAKAEWNFSLADCKNI-LS 472

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                S   +S  QLI  L+ YP+ IE A    EP  +A Y  + A  F+  ++  R   
Sbjct: 473 HSDLNSINHSSVWQLIKQLSLYPQAIERAVKRNEPSVVARYALETAKAFNRFYNLNR--- 529

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A + K    +L +  A A II   L+++G+++P +M
Sbjct: 530 ----ILAEDEKEQKAKLIVTTAAAEIIRRSLHLLGLKTPKQM 567


>gi|313206268|ref|YP_004045445.1| arginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445584|gb|ADQ81939.1| arginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023050|gb|EFT36063.1| arginyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336290|gb|ADZ12564.1| Arginyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 587

 Score =  334 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 120/635 (18%), Positives = 232/635 (36%), Gaps = 104/635 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +K  + ++   +   + I   + ++  +    G   T     L + L   P  + 
Sbjct: 2   DIKEYIKESITQVVESVYGLQNI--TLEVQENKTDFEGDF-TVVIFPLVKQLKKSPDALG 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + I   +    D    F   KGF+NL +   Y          +       +  K   V +
Sbjct: 59  QEIGEALINSSDFVEGFNVVKGFLNLKVKNKY----FIESFKAEELNFGTVTPKHQTVMV 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+ S N   P+H+GH R  ++G ++A ++  +GY+V +   +ND G  I    L+ + ++
Sbjct: 115 EYSSPNTNKPLHLGHIRNILLGYSVAQILKEAGYDVIKTQIVNDRGIHICKSMLA-WEKF 173

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMM 242
                  DS L      G Y     +E   +  + + N     E K   ++   + + ++
Sbjct: 174 GNGETPADSGLKGDKLVGNYYVKFDQEYKKEIQNLVENGLGEDEAKKQALIFVEAQKMLL 233

Query: 243 KIIR---------------------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
              +                     +  K L +  D    E + +       +D+I    
Sbjct: 234 DWEQENPQVRELWQKMNQWVYDGFGETYKRLGVDFDQIQYESNTYILG----KDLIQEGL 289

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G +Y+      K   +  CD+  + L            + LL+SDG+  Y   DL   
Sbjct: 290 SKGVLYQ------KEDGSVWCDLSDEGL----------DQKLLLRSDGTSVYMTQDLGTA 333

Query: 342 KCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIK 399
             ++++     +IY +G++   + + L  +   +    A  +  L   +V L       K
Sbjct: 334 VERFKQNDIQKLIYTVGNEQDYHFQVLFKILKKLGYDWAEHLYHLSYGMVELPHG----K 389

Query: 400 MSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRK 430
           M  R G  +    ++ E                             VG  ++++ ML   
Sbjct: 390 MKSREGTVVDADDLMQEMYLTAKEKAQELGKLEHLPEEDKERSYEIVGQGALKYYMLKVD 449

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + F+  +  +    N   ++QY YAR +S+  +A     DL  D+          E
Sbjct: 450 PKKKMLFNPEESIDF-NGNTGPFIQYTYARIQSLLEKAGYEPQDLADDI----------E 498

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  E +LI HL  +  V+  A     P +LA Y+YDL   ++  + +         +  
Sbjct: 499 INAYEKELITHLGNFKTVVSKAAETLSPAQLANYIYDLVKSYNSFYQNN------PILNQ 552

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +  +RL+L    A  I  GL ++G+   N M
Sbjct: 553 EDAAVKNLRLKLSALTAKTIKRGLELLGIGVVNRM 587


>gi|120437133|ref|YP_862819.1| arginyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579283|emb|CAL67752.1| arginyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 623

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 115/639 (17%), Positives = 235/639 (36%), Gaps = 101/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +S++   +K      K  +   + I  +  R    G + T     + + L   
Sbjct: 32  MNIEQILASKVNEAVK------KHYEVEPENIEFQPTRKDFEGDI-TLVVFPMLKQLRTS 84

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE I   ++ + +  + F   +GF+N+ +S  Y     + +               
Sbjct: 85  PAQLAEKIGKYLEDEVEEVASFNVIQGFLNIVISDQYYINFFNDVKDREDFGILLPQSDA 144

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + + +E+ S N   P+H+GH R  ++G +++ ++  +G EV +   IND G  I   ++ 
Sbjct: 145 SGIMVEYSSPNTNKPLHLGHIRNNLLGYSVSEILKAAGNEVYKVQVINDRGIHICK-SMV 203

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + ++        + L      G Y     +E   +                       +
Sbjct: 204 AWQKFGNEETPQSTGLKGDKLVGNYYVKFDQEYKKEIAQLKEEGKSEEEAKAQAPIFVEA 263

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E+L   E   L +VK +S               AL +  D    E + +      I+  
Sbjct: 264 QEMLRKWEANDLEVVKLWSTMNQWVYDGFEKTYDALGVDFDKNYYESETYILGKDNIQKG 323

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +++    G  Y+                D   +    +  G D ++ +L+SDG+  Y   
Sbjct: 324 LED----GVFYKK---------------DDGSVWIDLSDEGLD-EKIVLRSDGTAVYMTQ 363

Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+     ++ +   + M+Y +G++   + K L  +   +    A     L   +     G
Sbjct: 364 DIGTAIQRFADFDINQMVYTVGNEQEYHFKVLFLILKKLGYDWADALYHLSYGMVDLPSG 423

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             +G  ++++ +
Sbjct: 424 ---KMKSREGTVVDADDLIREMAETAKNISEELGKLDGYSETEKEELYRIIGLGALKYYI 480

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  +  +  + N   ++QY YAR +SI R+A         +      + 
Sbjct: 481 LKVDPKKRILFNPEESVDF-QGNTGPFIQYTYARIQSILRKA---------EFDTSAELS 530

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +E  F   E +LI  +  +P  I  A     P  +A Y Y+L   F+  + +      ++
Sbjct: 531 KEFSFHEKEKELIKQVQLFPETIALAAENHSPALIANYTYELVKSFNSFYQN------VQ 584

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  ++    + R+QL   VA++I SG  ++G+E P  M
Sbjct: 585 ILGIDDEAEKVFRVQLSGLVANVIKSGFKLLGIEVPERM 623


>gi|288926638|ref|ZP_06420553.1| tRNA ligase [Prevotella buccae D17]
 gi|288336607|gb|EFC74978.1| tRNA ligase [Prevotella buccae D17]
          Length = 605

 Score =  334 bits (856), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 123/647 (19%), Positives = 242/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +S +   +KE+  +   EK     + +++ +    G+L T       +     
Sbjct: 1   MKIENAIASAVIGAVKELYGQDVPEK----MVALQKTKSNFEGNL-TLVVFPFLKMSKKK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +       + F    GF+NL ++P+   ++L+ I        +      
Sbjct: 56  PEDTAQEIGRYLTEHCKAVASFNVVGGFLNLVIAPAAWVELLNDIHADDRFGRKTATEDS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFP-------- 225
            + ++        S     +  G Y        +   K L  +Y ++ L+          
Sbjct: 176 -WLKWGNGETPESSGKKGDHLIGDYYVAFDKHYREEVKALKAQYIADGLDEEKAEEKAKA 234

Query: 226 -----EEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+A+ + +         +  KAL +  D    E D +  
Sbjct: 235 EAPLIKEAHEMLVKWEQGDPEVRALWEKMNSWVYAGFDETYKALGVGFDKIYYESDTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +     +G  +                 D   +    T  G D  + LL++D
Sbjct: 295 GKKKVEEGL----AKGLFFRK---------------DDNSVWADLTEDGLD-QKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSLLLDRLGFKWGKELVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------------DEVG 418
            +    +G   KM  R G  +    ++                               VG
Sbjct: 395 GMVELPNG---KMKSREGTVVDADELIAAMIENARRTSDELGKFTDMTEDEKREIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A      +   
Sbjct: 452 LGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKAAADGITI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               + +P+++  +  E+ LI  + ++   +  A +   P  +A Y Y+L   F+  +  
Sbjct: 508 ---PSALPEDAPLNEKEINLIQKMNDFGAAVAQAGVDYSPSGIANYCYELVKEFNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A      + RL L   VA I+ S + ++G+E P  M
Sbjct: 565 ------YSILNAERDDEKLTRLVLAQNVAKIVKSAMALLGIEVPERM 605


>gi|315607135|ref|ZP_07882139.1| arginine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251189|gb|EFU31174.1| arginine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 605

 Score =  333 bits (855), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 123/647 (19%), Positives = 244/647 (37%), Gaps = 104/647 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +S +   +KE+  +   EK     + +++ +    G+L T       +     
Sbjct: 1   MKIENAIASAVIGAVKELYGQDVPEK----MVALQKTKSNFEGNL-TLVVFPFLKMSKKK 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +       + F    GF+NL ++P+   ++L+ I        +      
Sbjct: 56  PEDTAQEIGRYLTEHCKAVASFNVVGGFLNLVIAPAAWVELLNDIHADDRFGRKTATEDS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + V IE+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 116 SLVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-------LKHVGKELADKYSSELLNFP-------- 225
            + ++        S     +  G Y        +   K L  +Y ++ L+          
Sbjct: 176 -WLKWGNGETPESSGKKGDHLIGDYYVAFDKHYREEVKALKAQYIADGLDEEKAEEKAKA 234

Query: 226 -----EEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRG 268
                +E    +VK    D  V+A+ + +         +  KAL +  D    E D +  
Sbjct: 235 EAPLIKEAHEMLVKWEQGDPEVRALWEKMNNWVYAGFDETYKALGVGFDKIYYESDTYLE 294

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + + +     +G  +                 D   +    T  G D  + LL++D
Sbjct: 295 GKKKVEEGL----AKGLFFRK---------------DDNSVWADLTEDGLD-QKLLLRAD 334

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   D+     +++    D MIYV+G++ + + + L  +   +  K  +  V    
Sbjct: 335 GTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSLLLDRLGFKWGKELVHFSY 394

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------------DEVG 418
            +    +G   KM  R G  +    ++                               VG
Sbjct: 395 GMVELPNG---KMKSREGTVVDADELIAAMIENARRTSDELGKFTDMTEDEKREIARIVG 451

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++++ +L     + + F+  +  +    N   ++QY YAR RSI R+A      +   
Sbjct: 452 LGALKYFILKVDARKNMLFNPEESIDF-NGNTGPFIQYTYARIRSIMRKAAADGITI--- 507

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               + +P+++  +  E+ LI  + ++   +  A +   P  +A Y Y+L   F+  +  
Sbjct: 508 ---PSALPEDAPLNEKEINLIQKMNDFGAAVAQAGVDYSPSGIANYCYELVKEFNQFYHD 564

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + A +    + RL L   VA I+ S + ++G+E P  M
Sbjct: 565 ------YSILNAEHDDEKLTRLVLAQNVAKIVKSAMALLGIEVPERM 605


>gi|89891117|ref|ZP_01202625.1| arginyl-tRNA synthetase, ArgRS [Flavobacteria bacterium BBFL7]
 gi|89516761|gb|EAS19420.1| arginyl-tRNA synthetase, ArgRS [Flavobacteria bacterium BBFL7]
          Length = 593

 Score =  333 bits (855), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 120/639 (18%), Positives = 235/639 (36%), Gaps = 100/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     + +KN ++++          L+ + I   R   +G L T     + R +  +
Sbjct: 1   MTLNNQLETAVKNTVEQLFSVR------LENVEITLTRKDQNGDL-TVMVFPMLRHIKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I E I A +     + S  +  KGF+N+ ++     K  + I+         +    
Sbjct: 54  PAVIGEQIGAELAKTDLITSYEV-IKGFLNITVAHEVYLKDFNDILSQSDYGKSPVDKTK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           + V +E+ S N   P+H+GH R  ++G ++A ++  +G +V +   IND G  I    L+
Sbjct: 113 SGVMVEYSSPNTNKPLHLGHVRNNLLGYSVAQIVEATGRKVNKTQIINDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK------ 234
            + +Y        + L      G Y     +E   + +  +     E+            
Sbjct: 173 -WEQYGNGETPESTGLKGDKLVGNYYVKFDQEYKKEIADLIAAGKTEEEAKKEAPSLIAA 231

Query: 235 ----------DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D +V A+ K +            K L +  D    E + +       +D+
Sbjct: 232 QEMLRKWEQGDEAVVALWKKMNGWVYDGFETTYKNLGVNFDSLYYESNTYLLG----KDV 287

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     +G   +                    +    T  G D  + +L+SDG+  Y   
Sbjct: 288 VQIGLDKGVFEKDP---------------DGSVWIDLTDEGLDR-KIVLRSDGTAVYMTQ 331

Query: 337 DLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+     +  +   ++M+Y +G++   + K L  +   +    A+    L   +     G
Sbjct: 332 DIGTAIQRVKDHDINSMVYTVGNEQDYHFKVLFLILKKLGYDWAENLYHLSYGMVELPSG 391

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    +++E                             +G  ++++ M
Sbjct: 392 ---KMKSREGTVVDADELMEEMTDTAREIAQEQGKLEGMSDADKGDLYKMIGLGALKYFM 448

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + FD  K     + N   ++QY +AR +SI +++     DL         + 
Sbjct: 449 LKVDPKKSMMFDP-KESVDFQGNTGPFIQYTHARIKSILKKSGFEQGDLK--------VA 499

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +      +  +I  L +YP  IE A     P  +A Y+Y+L   F+  + +       +
Sbjct: 500 TDLALTDKDAAVIKLLQQYPETIEAAARNYSPALVANYVYELVKEFNSFYQN-----VPK 554

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V+ +N  +   RL L    A++I S   ++G+E P +M
Sbjct: 555 IVEESNTNMKQFRLALCFKTAAVIKSACGLLGIEVPEQM 593


>gi|325971806|ref|YP_004247997.1| arginyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027044|gb|ADY13803.1| Arginyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 587

 Score =  333 bits (854), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 117/618 (18%), Positives = 242/618 (39%), Gaps = 80/618 (12%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            S ++  L     ++  + ++L  + ++ P     G L+       ++ L   P  +A  
Sbjct: 10  KSLIEEQLALYAKEVLGQDQVLPPLAVQTPPKPELGDLAFPL-FAYAKLLRTAPPMLAAT 68

Query: 68  I---VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKV 123
           +   + ++   P  + + +AG  ++N+ +  + L   LS+++    E YG N      +V
Sbjct: 69  LKDRIEKLDQRPLGE-LLVAGP-YLNVRIDMAALATSLSALIADKQERYGTNESMAPKRV 126

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF   N   P+H+GH R   +G+++A+++  +G  V +   IN+ G  I    L+ + 
Sbjct: 127 TIEFSCPNTNKPLHLGHMRNDSLGESVAAILKANGATVRKVNLINNRGVHICKSMLA-YQ 185

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKE-----LADKYSSELLNFPEEKWLPIVKDYSV 238
           ++       +S +   +  G Y     +       A+  + E+L   E     ++  + +
Sbjct: 186 KFGNGETPQNSGIKGDHLVGKYYVKFAQWAKEDPTAEDQAQEMLRQWEAGNEQVIALWKL 245

Query: 239 QAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                   + +    + I  D +  E + ++     I   ++N    G  Y         
Sbjct: 246 MNGWTLDGLSESYIKMGISFDAYYYESETYQYGKDEILKGLEN----GVFYR-------- 293

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   +   +      +  D  + LL+ DG+  Y   D+     ++ +  FD++IYV
Sbjct: 294 -------EEDGSVWVDLEPIKLDK-KVLLRKDGTSLYMTQDVGTAIMRHKDWPFDSLIYV 345

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + S+   + + L  V A +    AQ ++ L   +V L       KM  R G  +    +V
Sbjct: 346 VASEQQYHFRVLFYVLAQLGYTWAQDLHHLSYGMVNLPEG----KMKSREGTVVDADELV 401

Query: 415 D---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           D                            +   ++ + +L    ++ + F+  +      
Sbjct: 402 DTLTSLARKEIEAKEREALVDDVQKTSQSIALGALNYYLLQVTPTKDMIFNPAE-SISFN 460

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+QY  AR  S+ R+ +  + D+    F  +++         E +LI  +A YP 
Sbjct: 461 GNTGPYLQYMGARISSMLRKYESEYADIRKLSFDSSLLTLSD-----ERELIKQIALYPE 515

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V+E A  A +P  L  YLYDL+ +F   +           ++A   +L   R++L   V 
Sbjct: 516 VVEKAGAALDPSLLCTYLYDLSKLFSRWYHDN------PILKAATAELVRSRIELASMVL 569

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ +   ++G+     M
Sbjct: 570 QVLKNAFGLVGIPFLASM 587


>gi|88604070|ref|YP_504248.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|109895001|sp|Q2FS66|SYR_METHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88189532|gb|ABD42529.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 555

 Score =  333 bits (854), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 139/578 (24%), Positives = 231/578 (39%), Gaps = 84/578 (14%)

Query: 41  AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSY 97
            H  +++  A  L++ L   P  IA+ I   I               G  ++N      Y
Sbjct: 29  DHADVASTIAFSLAKELRKAPAIIAQEIAGAISDQVMAETGAETRAVGP-YVNFIFGAEY 87

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              +L   V  G   G+    K  +V +E  SANP GP+HVGH R  ++GDTLA     +
Sbjct: 88  CMNVLEQAVREGYGKGQE---KSERVVLEHTSANPNGPLHVGHIRNTIIGDTLARCFRKA 144

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA-DK 216
           GY +  +YY+ND G QI  +A  +  +          D           +H+ KE A + 
Sbjct: 145 GYPLEVQYYVNDMGRQIAIVAWGIATQGADIHAEGKGDHLIADVYIEANRHLEKEPALNA 204

Query: 217 YSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               L+   E      +  +   V+  +   +D L A++++HD FI E DF R       
Sbjct: 205 EIDRLMQLVESGDPDTISQFKIPVKRCLDGFKDTLAAMHVKHDRFIYESDFIRNG----- 259

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D    L+R  ++ E  +    S                 +  G + +  L +SDG+  Y 
Sbjct: 260 DTAKVLSRISHLPEARIEETLS--------------LDLSAFGFEKNYILRRSDGTSVYA 305

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           A D+A+   K    FD +I V+G+DH     +L+A    + E+     ++  E V L   
Sbjct: 306 ARDIAFHIWK-GHNFDRVIDVLGADHKLIGTQLQATLEILGERVP--EIVFFEFVSLPEG 362

Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMML 427
                MS R G FI+   ++ E                           V   ++R+ ++
Sbjct: 363 ----SMSTRKGKFISADELIAETERRAMEEVTARRSELSEEERKKIAHSVAISAIRYDII 418

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                +   FD+ +  +  K++   Y+QYA+AR  SI  +A+   P  + +         
Sbjct: 419 RTIPEKSTVFDWKEALDFEKQS-GPYIQYAHARACSILEKAESYTPCFEAEG-------- 469

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                  E+ L   +A +P+VI       +P+ LA Y  +LA +F+  +      P LR 
Sbjct: 470 -----EGEIALTKQIALFPKVITEVVTELKPHLLAIYARELADIFNSFYHAE---PVLR- 520

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 K+   RL LV A  + +   L  +G+++   M
Sbjct: 521 ---AEGKIRDRRLTLVDATRNTLKEALETLGIDALRAM 555


>gi|320581220|gb|EFW95441.1| Arginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 680

 Score =  333 bits (854), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 137/658 (20%), Positives = 251/658 (38%), Gaps = 117/658 (17%)

Query: 4   FADFSS--RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           F D+++    +NY+     ++      +    +E      +G L      +    L  D 
Sbjct: 64  FPDYNTVDLCRNYIANQLSELTGVDASIAYQSLEWSLVLENGDLIVPLPRL---RLKGDL 120

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIGKG 120
           + +A+ +  +  +   +  V   GK F+  + +P +L K +   ++    ++G   +GKG
Sbjct: 121 VALAKELAEKFPLGGYLKKVHPEGK-FLQFFFNPEFLLKYVVKDVLERKQDFGSCPLGKG 179

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V IEF S N   P H GH R  ++G  L++L    G+EV R  Y+ D G Q   LA+ 
Sbjct: 180 KRVVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYERLGWEVIRMNYLGDWGKQFGLLAVG 239

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLK---------------------HVGKELADKYSS 219
            F +Y        +  P  +   VY++                         + A +   
Sbjct: 240 -FEKYGSEAELESN--PIQHLFDVYVRINQDVKAEEEEAEKTGVPLDEASSVDGAARAFF 296

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           + +   +++ L + + +   ++ K I D    LNI++D++  E    +     ++     
Sbjct: 297 KRMEQGDKQALGLWEKFRALSIEKYI-DTYARLNIKYDVYSGESQVSQELMDRVQ---KE 352

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAAD 337
           L  +  V E                DR  LL     +G+       + KSDG+  Y   D
Sbjct: 353 LQEKKLVTE----------------DRGALLIDFKQLGEKKLGKVLVQKSDGTSLYITRD 396

Query: 338 L-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           L A  + K +  FD MIYV+ S    +V++   +   +    A+  +L          G+
Sbjct: 397 LGAAIERKEKYHFDKMIYVIASQQDLHVRQFFRILEKMGYSWAKDELLHVNF------GL 450

Query: 397 PIKMSKRAGDFITLRHVV----------------------------DEVGSDSVRFMMLW 428
            + MS R G  + L  ++                            D VG  +V    + 
Sbjct: 451 VLGMSTRKGTVVFLDDILETVKSATLEIMQKNAEKFTLVEDPEAVADLVGISAVMIQDMQ 510

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQ 487
            K +   +F + ++   ++ +   Y+QYA++R RSI R         L  DL   N++  
Sbjct: 511 GKRNNNYEFSWDRMLS-TEGDTGPYLQYAHSRLRSIERNCNVAEEKLLVADLSIENLVGT 569

Query: 488 ESE-----FDTSELQ---------------LIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           E +      + +E                 L+  L  YP ++  A+   EP  L  YL+ 
Sbjct: 570 EDQVKQLGLEPAEQAKKLDILATQREKVESLVRILVSYPDILRYASKNHEPSTLVTYLFK 629

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   F   +   R       V     ++   RL L  +V  ++N+GL ++G+   + M
Sbjct: 630 LTHQFSSTYKVLR-------VMGEKEQVLEARLALFSSVRQVLNNGLRVLGITPVDRM 680


>gi|307566249|ref|ZP_07628695.1| arginine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345053|gb|EFN90444.1| arginine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 606

 Score =  333 bits (854), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 114/630 (18%), Positives = 239/630 (37%), Gaps = 69/630 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    +    + +K     ++V   +   + +++ R    G+L T     L R     
Sbjct: 1   MNIEHQITVAALSAIK-FLYGVEVPDSM---VQLQKTRTNFEGNL-TLVTFPLLRISKKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
                + I   +  +    + +   KGF+NL +S      +L+ I        + +  + 
Sbjct: 56  VEQTGQEIGEYLLANCTAVASYNVVKGFLNLVISSKAWISLLNDISSKDKFGEKEITKES 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G +LA +M  +G +V +   +ND G  I    L+
Sbjct: 116 PLVMVEYSSPNTNKPLHLGHVRNNLLGWSLARIMEANGNKVIKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            + ++   +   +S     +  G +     KH   EL +     L +   E+   + +  
Sbjct: 176 -WLKWGNGITPEESGKKGDHLIGDFYVAFDKHYRMELKELTEKFLADGLSEEEAKL-RAE 233

Query: 237 SVQAMMKIIRDDLKALNIQ----HDIFISEDDFHRGDPSPIRDII----DNLARQGYVYE 288
               +MK   + L            ++   + +           +    D +  +   Y 
Sbjct: 234 KESPLMKEAHEMLVKWEANDPEVRSLWAKMNSWVYAGFDETYKALGVSFDKIYYESNTYL 293

Query: 289 GILPPPKSKTTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY- 345
                 +    +   +  D   +    T  G D  + LL++DG+  Y   D+   + ++ 
Sbjct: 294 AGKKKVEEGLAKGLFIRKDDNSVWADLTNEGLD-QKLLLRADGTSVYMTQDIGTAQMRFT 352

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +   D MIYV+G++ + + + L  +   +  K  +  V     +    +G   KM  R G
Sbjct: 353 DYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREG 409

Query: 406 DFITLRHVVDE------------------------------VGSDSVRFMMLWRKNSELL 435
             +    +++                               VG  ++++ +L     + +
Sbjct: 410 TVVDADDLIESMIANAKKLSEDKVNKLEGITEEEKNEIARIVGLGALKYFILKVDARKNM 469

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F+  +  +    N   ++QY YAR RSI R+A+     +        ++  +S  +  E
Sbjct: 470 LFNPEESIDF-NGNTGPFIQYTYARIRSILRKAEAQHISI------PKMLSDKSPLNEKE 522

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           + L+  L E+   +  A +   P  +A Y Y+L   F+  +           + A+    
Sbjct: 523 IALVQKLNEFGSTVAQAGVDYSPSGIANYCYELTKEFNQFYHD------YSILGADTDAE 576

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + RL + + VA II +G++++G+E P  M
Sbjct: 577 KITRLVIANNVAKIIKNGMSLLGIEVPERM 606


>gi|239623481|ref|ZP_04666512.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521512|gb|EEQ61378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 627

 Score =  333 bits (853), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 124/663 (18%), Positives = 239/663 (36%), Gaps = 117/663 (17%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  ++  L++       E K    ++  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKILDLMEQELRQAFEACGYEAKFAKVVLSNRPDLCE---YQCNGAMAAAKAYKKKPID 57

Query: 64  IAELIVARI---------------------------------KIDPDVDSVFIAGKGFIN 90
           IA  +V ++                                    P          GFIN
Sbjct: 58  IATAVVEKLTGAGADASGAQAGGADASGAQTGGADAASMQSGSAHPVFSEAVAVMPGFIN 117

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L +S  +L + +  +  +  + G     K   V +++  AN   P+HVGH R A++G+++
Sbjct: 118 LKVSGQFLAEYMVRMAAAD-KLGLEAPEKPETVIVDYGGANVAKPLHVGHLRAAIIGESI 176

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGVYLK 207
             +  F G+    + ++ D G Q+  +   +  R    +Y ++S   + P      +   
Sbjct: 177 KRMGRFLGHRTIGDVHLGDWGLQMGLIIEELRDRKPGLVYFDESFTGEFPAEAPFTISEL 236

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKA----LNIQ 255
                 A   S     F E      +K            Q +M +  +DLK     LN++
Sbjct: 237 EEIYPAASAKSKTDEAFKERAHQATLKLQKGYAPFRAIWQHIMSVSVEDLKKNYSNLNVE 296

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E D        I D+I  L  +G  YE                 +  L+     
Sbjct: 297 FDLWKGESDAEPY----IADMIQMLVDKGLAYES----------------QGALVVDVAE 336

Query: 316 VGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371
             D  + P   + KSDG+  Y  +DLA    + +    D  IYV+      + +++  VA
Sbjct: 337 ETDSKEIPPCLIRKSDGASLYATSDLATIVEREQDFHPDRYIYVVDKRQGMHFEQVFRVA 396

Query: 372 AAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
                 K+    + L       +DG P K   R G  + L  ++ E              
Sbjct: 397 KKAGIVKQDTPMIFLGFGTMNGKDGKPFK--TREGGVMRLETLIAEINEAVYARIMEDEE 454

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         VG  ++++  L  +  +   FD  +    S  N   Y+ Y   R +
Sbjct: 455 RTVSEEEARRTAGIVGLAALKYGDLSNQAVKDYVFDIERFTAFS-GNTGPYILYTIVRIK 513

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI  + ++    +  D   +N++P     + SE  L++ ++ Y  V+E+      P+K+ 
Sbjct: 514 SILNKYRENGGIVSEDALEKNILPAA---NDSEKALMLLISRYNEVLESGFAETAPHKIC 570

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y+Y+L++ F+  +         + +   +       + L+     ++ + + ++G+E+P
Sbjct: 571 QYIYELSNAFNSFYH------ETKILTEPDEARKDSFIGLITLAKRVLETCIGLLGIEAP 624

Query: 583 NEM 585
           + M
Sbjct: 625 DRM 627


>gi|297519857|ref|ZP_06938243.1| arginyl-tRNA synthetase [Escherichia coli OP50]
          Length = 489

 Score =  332 bits (852), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 106/507 (20%), Positives = 199/507 (39%), Gaps = 58/507 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S +++  +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSEKVRQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + ++     V IAG GFIN++L P++L + +   + S          + 
Sbjct: 55  PRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATP--EK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G++V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAW 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + Q+     +    EG+Y            A K+  E   F E     +VK  S   
Sbjct: 173 LEKQQQENAGEMELADLEGFYRD----------AKKHYDEDEEFAERARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +  +       + R + +  RD +   +    +  GI+   K+K   
Sbjct: 223 YFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + +   ++F        G+ +   + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 279 -VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            S    ++ +  A+          + +      + L +DG P K   RAG  + L  ++D
Sbjct: 338 DSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRAGGTVKLADLLD 395

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    FD+  +    + 
Sbjct: 396 EALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEG 454

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDL 475
           N   Y+QYAY R  S+FR+A+     L
Sbjct: 455 NTAPYMQYAYTRVLSVFRKAEIDEEQL 481


>gi|330507292|ref|YP_004383720.1| arginyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928100|gb|AEB67902.1| arginyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 560

 Score =  332 bits (851), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 138/618 (22%), Positives = 252/618 (40%), Gaps = 93/618 (15%)

Query: 3   LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +F DF S ++  LK  +D      ++ ++ + +E      H  L+++ A  L+  L   P
Sbjct: 1   MFLDFMSEVEGLLKSALDRCGFAPEEGINSLGLELTP---HADLASSVAFRLAPVLKKSP 57

Query: 62  LTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IA  I   I  +    + V +AG  ++N +++ ++L  +L+  +      GR      
Sbjct: 58  AAIAGEIHQAIPHEFRYVEKVELAGP-YLNFFMNRAFLNAVLNQALADNAWTGR----MN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E  SANP GP+HVGH R +V+GDTL  ++  +G  V  +YY+ND G Q   + + 
Sbjct: 113 EKVIVEHTSANPDGPLHVGHIRNSVIGDTLVRILRRAGCTVDAQYYVNDMGRQEAMVVVG 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDY 236
           +        +  D   P+     VY+    +        + +  ++   E     +    
Sbjct: 173 L------DHFQLDGSKPDHAIARVYIAANKEMESNPAIREEADRVIQLYEAGDPEVTAKV 226

Query: 237 --SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +V+  +  I   L+ +NI HD +  E +F R     + +I+++L + G V        
Sbjct: 227 QSAVRYAIGGIEQTLQRMNICHDSYHWESEFVR--DGSVAEIVESLEKTGLVAW------ 278

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
                     D   L       G +    L +++G+  Y   DLAY + K     D  + 
Sbjct: 279 ----------DEGSLQLDLNDYGFEKKMVLKRANGTSLYITRDLAYHRWK-SANSDRSVD 327

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           ++G+DH     +L      +  ++    V++ E V L        MS R G FI+   ++
Sbjct: 328 ILGADHKLVSGQLRVALGLLGVREP--EVVIFEFVSLPTG----SMSTRKGKFISADELL 381

Query: 415 DE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           DE                           V S +VR+ ++     +   FD+ +  +  K
Sbjct: 382 DEVEKQAMEEVRARRPDESPEFLKEVARQVASGAVRYDVVKVSADKATTFDWKQALDFEK 441

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   ++QY++AR  SI R+ +                  +      E+ LI  +A++  
Sbjct: 442 LS-APFIQYSHARACSILRKGE-----------QSEKFQADLLVSDYEVALIKKIAQFDL 489

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           VI+ A    +P+ LA Y  +LA  F+  +       R   V   + +L   RL L  A  
Sbjct: 490 VIDRAACELKPHHLATYARELAESFNLFY-------RYSPVLDASFELRDARLALAKAAR 542

Query: 568 SIINSGLNIIGVESPNEM 585
           + + + L  +G+ +   M
Sbjct: 543 NALRTTLETLGISALETM 560


>gi|34540109|ref|NP_904588.1| arginyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932030|sp|Q7MXD5|SYR_PORGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34396420|gb|AAQ65487.1| arginyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 597

 Score =  332 bits (851), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 114/614 (18%), Positives = 230/614 (37%), Gaps = 54/614 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L+N        +     +  +I +++ +    GHL T       +     P   A 
Sbjct: 3   ILQKLENSAAAAVKALYGTDPMEGQIQLQKTKREFKGHL-TLVVFPFVKMSRKSPEATAT 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +    S     KGF+NL ++P    ++L+ I        +        V +E
Sbjct: 62  EIGEWLLANESAVSAIEVVKGFLNLTIAPRVWLELLNEIRADINFGHKVATEDSPLVMVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +L+ +M  +GY V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGYSLSEIMKANGYRVVKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMK 243
             +    +     +  G +     K    + +   +E  +  E +    +   + + +  
Sbjct: 181 DGVTPEKAGKKGDHLIGDFYVLFDKHYKAELNSLMAEGKSKEEAEAASTLMAEAREMLRL 240

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
               D K +++   +     D        +    D +  +   Y            +   
Sbjct: 241 WEAGDEKVVDLWRTMNQWVYDGFDATYKMMGVDFDKIYYESETYLVGKEEVLRGLEEGLF 300

Query: 304 MD--RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDH 360
           +      +    T  G D ++ LL++DG+  Y   D+   K ++ +   + MIYV+G++ 
Sbjct: 301 VKHSDGSVWADLTKDGLD-EKLLLRADGTSVYMTQDIGTAKMRFNDYPINRMIYVVGNEQ 359

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + + L  +   +  +  +  V     +    +G   KM  R G  +    ++DE    
Sbjct: 360 NYHFQVLSILLDRLGFEFGKGLVHFSYGMVELPEG---KMKSREGTVVDADDLMDEMIRT 416

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    VG  S+++ +L     + + F+  K       N  
Sbjct: 417 AAEIAAEAGKAAEMDEEESREVARIVGLGSLKYFILKVDPRKNMTFNP-KESIDFNGNTG 475

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            +VQY YAR RS+ R+A+    D+       + +P +      E  LI  ++EY  V+  
Sbjct: 476 SFVQYTYARIRSLMRRAEAAGYDI------PSQLPTDLPLSEKEEALIQKVSEYAEVVSE 529

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A  +  P  +A Y+YDL   ++  +           ++  + ++   RL L   VA  + 
Sbjct: 530 AGHSYSPALIANYIYDLVKEYNQFYHD------FSVLKEEDERIRAFRLALSEVVALTMR 583

Query: 572 SGLNIIGVESPNEM 585
            G  ++G+E P  M
Sbjct: 584 KGFALLGIEMPERM 597


>gi|149244104|ref|XP_001526595.1| arginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146448989|gb|EDK43245.1| arginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 672

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 125/638 (19%), Positives = 241/638 (37%), Gaps = 103/638 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +     KNY+ +   +I    K +    ++ P+    G +    A+   R  G+ P   +
Sbjct: 80  NIVDVFKNYITDELHRITEADKSIIFDALDTPKVLDQGDI--IVALPRLRIKGIKPNEKS 137

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124
           +    +      +      G  FI  + + S +   ++  ++    EYG   +G G K  
Sbjct: 138 QEWAEQFNKGKFISEARPQGV-FIQFFFNRSLVYDLVIKDVLKRKTEYGYLPLGVGKKAI 196

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FW 183
           +EF S N   P H GH R  ++G  +++L    G+EV R  Y+ D G Q   LA+    +
Sbjct: 197 VEFSSPNIAKPFHAGHLRSTIIGGFISNLYEKLGWEVVRINYLGDWGKQFGLLAVGFEKY 256

Query: 184 RYQQALYNNDSDLPEGYYPGVYLK---HVGKELADKYSSEL------------------- 221
             ++ L  +    P  +   VY+K    V +E ++                         
Sbjct: 257 GSEEQLAKD----PINHLFEVYVKVNNDVREEASEATGEPAVADAADADEKKVQASSTNE 312

Query: 222 --------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   +   +E  L I + +   ++ K I D    LNI++D +  E    +     +
Sbjct: 313 KARQFFRRMEDGDESALKIWRRFRDLSIDKYI-DTYARLNIKYDYYSGESQVPQ---EKM 368

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYT 332
           ++       +G V+                +DR   L   T     + + L+ KSDG+  
Sbjct: 369 KEATKLFEDKGLVH----------------VDRGAKLIDLTKFNKKLGKALVEKSDGTSL 412

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ----------- 380
           Y   D+     +YE   FD MIYV+ S    + ++   +   +  + A+           
Sbjct: 413 YLTRDVGEAIKRYETYKFDKMIYVIASQQDLHCQQFFEILKQMGFEWAKNLEHINFGMVQ 472

Query: 381 -------INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRK 430
                    V L  +++  ++ M   M K A  +  +     + + VG  +V       K
Sbjct: 473 GMSTRKGNVVFLDNILQETKEKMHDVMKKNADKYAQIEEPDKIAELVGISAVMIQDFQSK 532

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ---AKDIFPDLDFDLFPRNVIPQ 487
                +F + ++    + +   Y+QYA++R  S+ R+   +++   + +FDL        
Sbjct: 533 RILNYEFKWDRMTSF-EGDTGPYLQYAHSRLSSMQRKSDISEEELENANFDLLT------ 585

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +     L+  L +YP +I  A+   EP  +  YL+ L  +    +        + +
Sbjct: 586 ----EPCAANLVRTLLQYPDIIRRASHNNEPSTIVTYLFTLCHIVSQCYD-------ILW 634

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V    R++   RL L  A   +I +G+ ++G+     M
Sbjct: 635 VAGQEREVATARLALYAATKQVIYNGMTLLGLTPVERM 672


>gi|260437972|ref|ZP_05791788.1| arginine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809598|gb|EFF68803.1| arginine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 588

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 107/624 (17%), Positives = 235/624 (37%), Gaps = 78/624 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                 ++   +     +   + K     +  RP  C       N AM  ++     P  
Sbjct: 1   MKKILDQITEIVGNAFKQCGYDDKYGKTGISNRPDLCE---YQCNGAMAAAKEYKKAPFM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           I + +VA ++ +   + V     GFIN+ +S  ++   + ++ +   ++G +   K   V
Sbjct: 58  IGDEVVAILQDNSAFEKVECIKPGFINMVMSADFIGGYVRAMALED-KFGCDCEPKDETV 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+H+GH R AV+G+++  +  F+GY+   + ++ D G Q+  +   +  
Sbjct: 117 FVDYGGANVAKPLHIGHLRSAVIGESVKRICKFAGYKTIGDVHLGDWGLQMGLIITELKE 176

Query: 184 RYQQALYNND---SDLP----------EGYYP---GVYLKHVGKELADKYSSELLNFPEE 227
           R     Y +D    + P          E  YP   G   ++   + + + ++ LL     
Sbjct: 177 RKPDLPYFDDNFTGEYPAEAPFTISELEEIYPCASGKSKEYAEYKKSAQNATYLLQNGHR 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +  + K + +   +  ++ +   LN+  D++  E D        ++D++D     G  +
Sbjct: 237 GYTALWK-HIINVSVADLKKNYGNLNVHFDLWKGESDAQPYIADMVKDMVDR----GIAH 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E       S+     D+  +          +     + KSDG+  Y  +DLA    + + 
Sbjct: 292 E-------SQGAIVVDIAEE------NDSRELPPCIIQKSDGAANYETSDLATLIEREKL 338

Query: 348 GFDNM-IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIK------ 399
                 IY+       +  +   VA           +       +   DG P K      
Sbjct: 339 YAPKSYIYLADKRQELHYTQFFRVARKAGIVSPDTELKFIGFGTMNGSDGKPFKTRQGGV 398

Query: 400 ------------------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
                             M+ R  D    R+    VG  ++++  L  + S+   FD  +
Sbjct: 399 LRLEYLIKEIEDKVYEKIMANRTVDESEARNTAKMVGLAALKYGDLSNQASKDYVFDIDR 458

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                + +   Y+ Y   R +SI ++ ++    +       + I   +    SE  L++ 
Sbjct: 459 FTSF-EGDTGPYILYTIVRIKSILKKYENAGGVV-------SGIHTANPESESERSLMLV 510

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L     +I+ A     P+K+  ++YDL++ F+  +         + +   +       + 
Sbjct: 511 LTGMQDMIKTAYEESAPHKICKFIYDLSNAFNHFYH------ETKILSEEDENKKKGYIA 564

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L+     ++ + ++++G+E+P  M
Sbjct: 565 LIKLTKDVLETCVDLLGIEAPERM 588


>gi|238916469|ref|YP_002929986.1| arginyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871829|gb|ACR71539.1| arginyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 588

 Score =  331 bits (850), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/623 (18%), Positives = 232/623 (37%), Gaps = 82/623 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               + + +K +  +   ++      V  RP  C       N AM  ++     P  IA+
Sbjct: 4   IIELITDEIKNVFAECGYDEAYAKVTVSNRPDLCE---FQCNGAMAAAKAYKKAPFMIAD 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +VA++  +     +     GFIN+ +   YL   L+ +  +  ++G         V ++
Sbjct: 61  EVVAKLADNKMFSKIESVKPGFININICEDYLAGYLNEMSET-EKFGYVNSESNKTVIVD 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +  AN   P+HVGH R AV+G+++  +  F G +   + ++ D G Q+  +   +  R  
Sbjct: 120 YGGANAAKPLHVGHLRSAVIGESVKRINTFVGNKTIGDVHLGDWGLQMGLIIEELRDRKP 179

Query: 187 QALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQ 239
           +  Y +DS   + PE     +         A   S E + F E      +K    D + +
Sbjct: 180 ELPYFDDSFTGEYPEEAPFTISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACR 239

Query: 240 AMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           A+   I        + +   LN+  D++  E D        I D+++ +   G  YE   
Sbjct: 240 AIWHHIMNVSKADLKKNYDNLNVHFDLWKGESDAQPY----IDDMVNKMIADGIAYES-- 293

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-R 347
                         +   +      GD  + P   + KSDG+  Y  +DLA    + +  
Sbjct: 294 --------------QGATVVDIQQEGDTKELPPCIVRKSDGAALYATSDLATIVEREKLY 339

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIK------- 399
             D  IY+       +  ++   A          ++       +  +DG P K       
Sbjct: 340 HPDTYIYLADKRQELHFTQVFRTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKTRSGGVM 399

Query: 400 -----------------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
                            MS R  +    R     VG  ++++  L  + S+   FD  + 
Sbjct: 400 RLEHLIADIDEAVYEKIMSNRTVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERF 459

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + N   Y+ Y   R +SI  +  +            N +   +  + SE  L + L
Sbjct: 460 SSF-EGNTGPYILYTIVRIKSILNKYTENGGS-------TNNLKIMAATEESEKNLSLSL 511

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++  +I+ A     P+K+  ++Y++++ F+G + +       + +   +       + L
Sbjct: 512 IKFADIIDGAYRDNAPHKICQFIYEVSNAFNGFYHNN------KILSEPDEAKKASYIAL 565

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           +    SI+   ++++ +E P+ M
Sbjct: 566 ISLTKSILEQCIDLLAIECPDRM 588


>gi|332297543|ref|YP_004439465.1| Arginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180646|gb|AEE16334.1| Arginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 598

 Score =  331 bits (850), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/633 (18%), Positives = 224/633 (35%), Gaps = 86/633 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKK------ILDRIVIERPRDCAHGHLSTNAAMILSRPL 57
            AD   +    + +   K+K E            +  E P +   G +        ++  
Sbjct: 1   MADLKEQCLLVVADALNKLKTEAGFDGPDVAPGSLTAETPPNPEMGDVGIPL-FQFAKLF 59

Query: 58  GLDPLTIAELIVARIKIDPDVD--SVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGR 114
            + P  IA+   A     P       F A   ++N+ L+  + +  IL  +      YG 
Sbjct: 60  RMAPPIIAQKTAAYACAHPSAAVTGCFTAAGPYVNVKLNKSAAVSAILGRVAAQNASYGS 119

Query: 115 NL-----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
                       +V +EF S N   P+H+GH R   +G++++ ++  +G EV +   IN+
Sbjct: 120 CNTDGVAPLADRRVMVEFSSPNTNKPLHLGHLRNDALGESVSRILKAAGAEVYKVNIINN 179

Query: 170 AGAQINTLALSVFWRYQ------QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
            G  I    L+    ++      + L           Y            A+  + ELL 
Sbjct: 180 RGVHICKSMLAYKKFHEAAGDTPEKLGVKSDRFVGDCYVEFDKYSKTDAAAESQAQELLV 239

Query: 224 FPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             E  ++ +  +        ++ I    K   +  D    E D +        +I+  LA
Sbjct: 240 KWEQGDESVRALWKRMNDWAIRGITQTYKRTGVSFDKLYYESDTYLKGK---EEILKGLA 296

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
             G  Y                 +   +      +G D  + LL+ DG+  Y   D+   
Sbjct: 297 D-GIFYR---------------EEDGSVWVDLAEIGLDK-KVLLRKDGTALYMTQDIGTA 339

Query: 342 KCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIK 399
             ++ +  F+ ++YV+GS+   + K L  V   +  + A ++  L   +V L       K
Sbjct: 340 IYRHGDWAFNQLVYVVGSEQQYHFKVLFYVLKKLGYEWASRLYHLSYGMVNLPEG----K 395

Query: 400 MSKRAGDFITLRHVV---------------------------DEVGSDSVRFMMLWRKNS 432
           M  R G  +    ++                           +++   ++ + +L    +
Sbjct: 396 MKSREGTVVDADDLINTLRDGALEEIAAKGREEAVGDPAAVAEKIALGALHYYLLQTTPT 455

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F+  K       N   Y+QY  AR  SI R+A D             ++  E+   
Sbjct: 456 KDMLFNP-KESLAFNGNTGPYLQYMGARICSILRKAADTGLQAASPAQAAALLTHET--- 511

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E +L+  L +YP V+  A    +P +L  +LYD+A  F   +           + + N
Sbjct: 512 --EWELVKLLGDYPSVVVKAAENLDPSQLTGFLYDVAKAFGKFYHECPAVG----IASEN 565

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L   RL L+    +++ + + ++ +     M
Sbjct: 566 PALASARLALIAGTRTVLENAMQLVLIPFLEAM 598


>gi|91218027|ref|ZP_01254978.1| arginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91183774|gb|EAS70166.1| arginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 592

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 126/620 (20%), Positives = 238/620 (38%), Gaps = 63/620 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L A  S  +  Y+++      ++ +  +    +  R    G L T     L R +  +
Sbjct: 1   MTLEAQLSKYVTKYIQD---NHDIDVQSFE---FQLTRKEFKGDL-TLVVFPLLRHIKTN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ + E I   +     + S F   KGF+NL L+ SY + ++ S+        R      
Sbjct: 54  PVQLGEQIGEYLSKHSSLVSEFNVVKGFLNLSLTESYFKDLVVSMSQDENFGFRKATPTS 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+ S N   P+H+GH R  ++G ++A +   +G  V +   IND G  I    L+
Sbjct: 114 QKVMVEYSSPNTNKPLHLGHIRNNLLGFSVAEIQKAAGKHVYKTQIINDRGIHICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + ++ +      S L   +  G Y     K    +  + L     E+         ++A
Sbjct: 174 -WQKFGEEETPESSGLKGDHLVGKYYVKFDKAYKSEIENLLKEGKTEEEAKKQAPILLEA 232

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSK 297
              + + +   L +           + G  +   ++    D    +   Y       K+ 
Sbjct: 233 QNMLQKWEAGDLEVVKLWKTMNKWVYEGFETTYTNLGVNFDKNYYESDTYILGKDHIKTG 292

Query: 298 TTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354
                    D   +    +  G D ++ +L+SDG+  Y   D+     +  +   D MIY
Sbjct: 293 LETGVFFTKDDGSVWIDLSNEGLD-EKIVLRSDGTSVYMTQDIGTAIQRVTDYDIDEMIY 351

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            +G++   + K L  +   +  + A+    L   +     G   KM  R G  +    ++
Sbjct: 352 TVGNEQDYHFKVLFLILKKLGFEWAEHLYHLSYGMVDLPSG---KMKSREGKVVDADDLI 408

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +E                             +G  ++++ +L     + + FD  K    
Sbjct: 409 EEMTSTARSISQELGKLEGYDDDEKNRLYKMIGLGALKYYILKVDPKKRILFDP-KESVD 467

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   ++QY YAR +SI R+ K    DL+   +         EF++ E  LI  L ++
Sbjct: 468 FQGNTGPFIQYTYARIQSILRKGKKESKDLNLSSY---------EFNSKEKSLIKILNQF 518

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P +I+ A     P  +A Y+YDL   F+  + +      +  + A+       R++L   
Sbjct: 519 PELIQQAAEQYSPALIANYVYDLVKEFNSFYQN------VSILGADEEHQIEFRVELSRL 572

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  +I     ++G+E PN+M
Sbjct: 573 VGEVIKKSFKVLGIEVPNQM 592


>gi|317472406|ref|ZP_07931731.1| arginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900126|gb|EFV22115.1| arginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 490

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 112/534 (20%), Positives = 223/534 (41%), Gaps = 78/534 (14%)

Query: 85  GKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           G  ++N ++  + ++ ++L  + V    YG + IG G  + I++ S N     HVGH R 
Sbjct: 2   GP-YVNFFIDRTMFVSEMLKQVSVDN--YGSSEIGCGKTICIDYSSPNVAKNFHVGHLRT 58

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALY-NNDSDLPEGYY 201
            ++G+++  +    GY V R  ++ D G Q   L ++   W  ++A+  N  S+L + Y 
Sbjct: 59  TLIGNSIYRIYKKLGYRVERINHLGDWGTQFGKLIVAYKKWGSKEAVEQNGISELMKIYV 118

Query: 202 PGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                      L D+  +  +     +E+ L I + +   ++++  +   + L++  D +
Sbjct: 119 KFHEEAEKDDTLNDEARAWFVKMEQGDEEALSIWEWFKDISLIEY-KRIYELLDVDFDSY 177

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E  +          ++D L ++G + E       S+     D+++           D 
Sbjct: 178 AGESFY----RDKTSAVVDELKKKGMLKE-------SEGAFIVDLEKY----------DM 216

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               ++K DGS  Y   DLA    + +   F+  IYV G +   +  ++  V   +  + 
Sbjct: 217 TPCLIMKKDGSSIYATRDLAAIFYRKKTYDFEKCIYVTGMEQKLHFAQVFKVVELMGYEW 276

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
           A+ +++      +  +G   K+S R+G+ I    ++ E                      
Sbjct: 277 AKTDLIHVPYGLVSLEGG--KLSTRSGNIIYAEDILRESVSKIKEVINDKNPDLQDKEEV 334

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--DI 471
              VG  ++ F  L+ +  + + F + K+     E    YVQY YAR  S+ R+    D+
Sbjct: 335 AKMVGIGAIIFNDLYNQRIKDVTFSWDKIHSFDGE-TGPYVQYTYARAASVLRKTGITDV 393

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             ++D  L            D + + L+  L  +P V+E A    EP  +A ++  +A  
Sbjct: 394 PEEIDSSLLT----------DEASVSLLKELIRFPEVVETAAERLEPSVVARFVMSVAQA 443

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  +   + N         + KL   R++LV      I  GL+++G++ P +M
Sbjct: 444 FNHFYHENQCN-------VEDEKLKRARVKLVIIAKEAIKDGLDLLGMKCPEQM 490


>gi|241948189|ref|XP_002416817.1| arginine-trna ligase, putative; arginyl-trna synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223640155|emb|CAX44402.1| arginine-trna ligase, putative [Candida dubliniensis CD36]
          Length = 643

 Score =  331 bits (848), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 128/640 (20%), Positives = 242/640 (37%), Gaps = 102/640 (15%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +   F + +   L  I     V+K I+ +  ++ P+    G +      +  R  G++P
Sbjct: 50  NVVDVFRNYIAEELNRISS---VDKSIIIQ-ALDTPKVLDQGDIIVPIPKL--RLKGINP 103

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVS-GIEYGRNLIGK 119
              ++           +    I  +G F+  Y + + L  ++   V+    +YG   +G 
Sbjct: 104 NEKSKEWAESFNKGKFIS--EIKPQGVFLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGV 161

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K  +EF S N   P H GH R  ++G  +++L    G++VTR  Y+ D G Q   LA+
Sbjct: 162 GKKAIVEFSSPNIAKPFHAGHLRSTIIGGFISNLYEKVGWDVTRINYLGDWGKQFGLLAV 221

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLK---HVGKELADKYSS----------------- 219
             F RY           P  +   VY+K    V KE ++                     
Sbjct: 222 G-FERYGDESKLASD--PINHLFEVYVKINQDVAKETSEATGETPGESIDASEQDEKKIQ 278

Query: 220 -----------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                        +   +E  L I   +   ++ K + D    LNI++D++  E    + 
Sbjct: 279 SSTNEEARKFFRRMEDGDESALKIWARFRDLSIEKYV-DTYGRLNIKYDVYSGESQVPQ- 336

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KS 327
               +++       +G +                D+DR   L   T     + + L+ KS
Sbjct: 337 --DKMKEATKLFEDKGLI----------------DIDRGAKLIDLTKFNKKLGKALVEKS 378

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------ 380
           DG+  Y   D+     +YE   FD MIYV+ +    +  +   +   +  + A       
Sbjct: 379 DGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQDLHCAQFFEILKQMGFEWAHNLEHIN 438

Query: 381 ------------INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFM 425
                         V L  +++  ++ M   M K    +  +     + D +G  +V   
Sbjct: 439 FGMVQGMSTRKGTVVFLDNILQETKEKMHEVMQKNEEKYAQIEDPDKIADLIGISAVMIQ 498

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            +  K     +F + ++    + +   Y+QYA++R  S+ R++     +L+   F     
Sbjct: 499 DMQSKRIHNYEFKWDRMTSF-EGDTGPYLQYAHSRLCSMQRKSGISIEELEHANF----- 552

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             E   +     L   LA+YP VI+ A    EP  +  YL+ +  +    +        +
Sbjct: 553 --ELLVEPCASALARTLAQYPDVIKKAVKGLEPSTIVTYLFSVTHIVSQCYD-------I 603

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +V    +++ + RL L  A   +IN+G+ ++G+   N M
Sbjct: 604 LWVSGQEKEVAIARLALYEAARQVINNGMTLLGLTPVNRM 643


>gi|46204894|ref|ZP_00209613.1| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 311

 Score =  331 bits (848), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 175/313 (55%), Positives = 228/313 (72%), Gaps = 2/313 (0%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MHVGH R AV GD LA+L+A +G  VTREYYINDAGAQ++ LA S F RY++AL      
Sbjct: 1   MHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLARSAFLRYREAL-GETIA 59

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +PEG YPG YLK VG  LA  +   LL+ PE +WLP+V+ +++ AMM  IR+DL A+ I+
Sbjct: 60  IPEGLYPGDYLKPVGAALAQAHGRALLDKPEAEWLPLVRRFAIDAMMDTIREDLAAIGIR 119

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           HD+F SE      +   + ++++ L  +G VYEG LPPPK +     + DR+Q LFRST 
Sbjct: 120 HDVFFSEATLQGENGGKVAELLEALRAKGLVYEGHLPPPKGQLPDDWE-DREQTLFRSTQ 178

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
            GDDVDR LLKSDGSYTYFA+D+AY + K+ RG + +I V+G+DH GYVKR++A   AVS
Sbjct: 179 FGDDVDRALLKSDGSYTYFASDIAYHRDKWLRGANELIDVLGADHGGYVKRMQAAVKAVS 238

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           + +A+++V LC+LVRL R G P+KMSKRAG+FITLR V+DEVG D++RFMML+RKN   L
Sbjct: 239 DGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFITLREVIDEVGRDAIRFMMLYRKNDATL 298

Query: 436 DFDFCKVKEQSKE 448
           DFD  KV EQSK+
Sbjct: 299 DFDLAKVVEQSKD 311


>gi|323454276|gb|EGB10146.1| hypothetical protein AURANDRAFT_22930 [Aureococcus anophagefferens]
          Length = 644

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 129/602 (21%), Positives = 210/602 (34%), Gaps = 92/602 (15%)

Query: 39  DCAHGHLSTNAAMILSRPLG--LDPLTIAELIVARIKIDPDVDSV-----FIAGKGFINL 91
               G    NAA+ LS+ LG    P  +A  IV  ++ D  V SV      IAG GF+NL
Sbjct: 80  KKEFGDFQCNAALALSKKLGAPRPPRDVAADIVRALEADAGVASVVSFPLEIAGPGFVNL 139

Query: 92  YLSPSYLRKILSSIVVSGIEY-GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            LS  YL +  +++        G         V +++ S N    MHVGH R  V+GD L
Sbjct: 140 RLSDDYLARTAAAMAADADGRCGVPRAAAPRTVVVDYSSPNIAKEMHVGHLRSTVIGDAL 199

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+ + F+G++V R  ++ D G Q   L   +      A    ++D PE            
Sbjct: 200 ANCLEFAGHDVRRVNHVGDWGTQFGMLLAHL---DDVAPVGGENDAPELG---------- 246

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRG 268
            +L   Y      F  ++   +    +V A+       L A          E D  + R 
Sbjct: 247 -DLVAFYKEAKARFDADESFKLRARDNVVALQGGDARSLAAWRRLCAASRVEFDAIYDRL 305

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLK 326
             + + ++ ++       Y   L    +      +       +              + K
Sbjct: 306 GVAGLEEVGES------FYNDRLEATVAALGDLAEPSEGATVVWPPGDPETRGNPMIVRK 359

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA--AVSEKKAQINV 383
           SDG + Y   DLA    +  +   D ++YV  +    +   +   A   A+    A +  
Sbjct: 360 SDGGFLYATTDLAAAAYRCGDLKADRVLYVTDAGQGPHFAAVFEAAKRAALVAGDALLEH 419

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +   LVR   DG   K + R+G+ + L+ ++DE                           
Sbjct: 420 VPFGLVR-GEDGK--KFATRSGETVRLKDLLDEAERRALADLRARRDDRNAEDSSDASLD 476

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V++  L         F + K+   +  N   Y+ Y+YAR   I
Sbjct: 477 FDDAELAALARAVGIGAVKYADLSLNRESNYKFSYGKMLALT-GNTAPYMLYSYARINGI 535

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A +       D         E         L   L               P  L  Y
Sbjct: 536 RRRAAERGDAAAGDAAVVFDDDAERALARHLALLAPTLVNLE-------RDLRPNALCDY 588

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN-IIGVESPN 583
           L++LA +F+  +            QA   +L   R +L  A A  +  GL+ I+G+   +
Sbjct: 589 LFELAQIFNRFYESC------PVTQAPTPELAASRAKLCAATAGALKLGLSTILGIPVVD 642

Query: 584 EM 585
            M
Sbjct: 643 RM 644


>gi|312886568|ref|ZP_07746176.1| arginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311300971|gb|EFQ78032.1| arginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 589

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 116/629 (18%), Positives = 239/629 (37%), Gaps = 98/629 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +   LK +    + +    D + +++ R    G ++        +     P    + I  
Sbjct: 5   VDATLKAVKALYQTDIAAAD-VNLQQTRKEFEGQVTI-VTFPFVKFSRKSPEQTGKEIGE 62

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            I+ +    S F   KGF+N+ ++ +Y  K L + +    +       KG KV +E+ S 
Sbjct: 63  FIENEVADVSGFNVIKGFLNISITDAYWIKQLYTEIA--GDGFGTFPAKGEKVMVEYSSP 120

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           N   P+H+GH R  ++G ++A ++  +GY+V +   +ND G  I    L+ + ++     
Sbjct: 121 NTNKPLHLGHIRNNLLGYSVAEILKANGYDVIKANLVNDRGIHICKSMLA-WQKFGNGET 179

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADK----------------------YSSELLNFPEEK 228
              + L   +  G Y     ++   +                       + ++L   E  
Sbjct: 180 PESTGLKGDHLVGKYYVVFDQQYKKQIDQLKAEGQTEDEAKKNAPFIIEAQQMLEKWEAG 239

Query: 229 WLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
              ++  +            +  K L +  D +  E   +       +DI+D    +G  
Sbjct: 240 DPEVISLWETMNGWVYAGFAETYKKLGVDFDQYYYESKTYLLG----KDIVDEGLAKGVF 295

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY- 345
           ++                +   +    T  G D ++ +L+++G+  Y   D+   + KY 
Sbjct: 296 FKK---------------EDGSVWIDLTADGLD-EKLVLRANGTSVYITQDVGTAQLKYN 339

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +   D  IYV+G++   + K L  +   + +  AQ    L   +     G   KM  R G
Sbjct: 340 DYHMDKSIYVVGNEQDYHFKVLFLILQKLGKSWAQGLFHLSYGMVDLPSG---KMKSREG 396

Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436
             +    ++ E                             +G  ++++ +L  +  + L 
Sbjct: 397 TVVDADDLMAEMEQTAKAQTELLGKVNDFDEDEKKQLYHNIGMGALKYFLLKVEPKKRLL 456

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +  +  + +   ++QY +AR +S+ ++A       +             E DT E 
Sbjct: 457 FDPNESIDF-QGHTGPFIQYTHARIKSVLKRAGFKSGQTNGGT---------KELDTVER 506

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           +LI+ L +YP  I  A     P  +A Y+Y+LA  ++  +           ++A +  + 
Sbjct: 507 ELILALNQYPDAIMQAARDYSPAIIANYVYELAKTYNKFYQEK------PILKAEDEIIM 560

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL+L  A A II+  ++++G+  P  M
Sbjct: 561 QFRLELSAASAKIISKAMSLLGINVPERM 589


>gi|319952158|ref|YP_004163425.1| arginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420818|gb|ADV47927.1| arginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 592

 Score =  330 bits (847), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 125/640 (19%), Positives = 235/640 (36%), Gaps = 103/640 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     +++K  +  +       K  L  +  +  R    G ++     +L R +  +
Sbjct: 1   MNIQNVLETKVKEAVSTLF------KAELPSVEFQPTRRDFEGDITIVVFPML-RVVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I   I A +  +    S F   KGF+NL ++ ++      +I  +   +G       
Sbjct: 54  PVQIGNEIGAYLVQEVAEVSGFNVIKGFLNLVITDAHYLADFKTIAAN-TTFGFVEQDAS 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G  +A ++  SG +V +   IND G  I    L+
Sbjct: 113 NAVMVEYSSPNTNKPLHLGHVRNNLLGYAVAEILKASGKKVYKTQIINDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIV--- 233
            + ++ +      + L      G Y     K    E+AD  +  L     EK  PI+   
Sbjct: 173 -WQKFGKGETPESTGLKGDKLVGNYYVAFDKAYKVEIADLVAGGLAKEAAEKQAPILLEA 231

Query: 234 ---------KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V ++ K +            K L +  D    E D +       +D+
Sbjct: 232 KQMLLKWEAGDEEVVSLWKTMNQWVYKGFAVTYKNLGVDFDTLYYESDTYLLG----KDV 287

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +    + G  ++                +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 288 VAEGLKTGVFFKK---------------EDGSVWIDLTDEGLD-EKIVLRSDGTAVYMTQ 331

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   M+Y +G++   + K L  +   +    ++    L   +     
Sbjct: 332 DIGTAIQRVKDNPDVSGMVYTVGNEQDYHFKVLFLILKKLGFSWSKNLFHLSYGMVDLPS 391

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    ++ E                             +G  ++++ 
Sbjct: 392 G---KMKSREGTVVDADDLMQEMTTTAGEISQELGKLEDYSDAEKQDLYKMIGLGALKYY 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + FD  +  +  + N   ++QY YAR +SI R+A++            N  
Sbjct: 449 ILKVDPKKRILFDPEESVDF-QGNTGPFIQYTYARIQSILRKAEE---------LSLNGF 498

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              +     E +LI  L  YP  I+ A     P  +A Y YDL   F+  + +      +
Sbjct: 499 AGLTTLHEKEKELIKQLQGYPEAIQLAAANYSPALVANYTYDLVKEFNSFYQN------V 552

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +          R+QL   V+ +I S   ++G+E P  M
Sbjct: 553 SILGEEEEHKKAFRIQLSKKVSEVIQSSFKLLGIEVPERM 592


>gi|328947509|ref|YP_004364846.1| arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447833|gb|AEB13549.1| Arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 609

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 126/636 (19%), Positives = 249/636 (39%), Gaps = 91/636 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           F S + N + +   + K++   +D   + +E P     G L +      ++   + P  I
Sbjct: 8   FKSAVLNAVNQFKIENKIDCPEIDEKLVRVENPPRPEMGDLGSPM-FPFAKMFRMAPPAI 66

Query: 65  AELIVARIKIDPDVD-------SVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGR-- 114
           A  +   +K   + D           AG  ++N+ L+ +     IL+SIV  G  YG   
Sbjct: 67  AASVAQSLKKSAENDASLASLGEFDAAGP-YVNIKLNKAASASGILASIVSQGENYGSFD 125

Query: 115 ---NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
                  +G ++ +EF S N   P+H+GH R   +G++++ ++  +G EV +   IN+ G
Sbjct: 126 SAGKKPLEGQRIMVEFSSPNTNKPLHLGHLRNDALGESVSRILKKAGAEVFKVDLINNRG 185

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             I    L+      +  +   ++ PE     G +         DKYS E     ++   
Sbjct: 186 IHICKSMLAY-----KLFHEAKNETPESLGMKGDHFVGQCYVEFDKYSKEHPEAVQQAEE 240

Query: 231 PIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +VK    D  V+ + + +        ++  K   I  D F  E D +      I   + 
Sbjct: 241 MLVKWEQGDKEVRGLWQKMNSWTLDGLKETYKRTGIVFDKFYFESDTYLKGKDEILKGL- 299

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +G  ++      +   T      + +         D  ++ LL+ DG+  Y   D+
Sbjct: 300 ---EKGVFFKAPDGSVRIDVTDVVGKGKDE---------DSHEKVLLRKDGTSVYITQDI 347

Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGM 396
                ++ +  F+ ++YV+ S+ + + K L  +   +      ++  L   LV L     
Sbjct: 348 GTAISRHNDWPFNQLVYVVASEQNYHFKILFHILKKLGFGWTEKLFHLSYGLVNLPSG-- 405

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVR---------------------------FMMLWR 429
             +M  R G  +    ++D + + +++                           + +L  
Sbjct: 406 --RMKSREGTVVDADDLIDSLHAQALKAIEERGRDNSVGNPDEVAEKVALAALDYYLLNV 463

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + + F+  +       N   Y+QY  AR  SI R+AK+   +    +   +++  E 
Sbjct: 464 APVKDMLFNPEESLSF-NGNTGPYLQYMGARIASILRKAKEQGLEPSSSVEDFSLLTAE- 521

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
               SE  LI  L  +P +++ +    +P  +A YLYD++  F   +   R+ P +    
Sbjct: 522 ----SEWALIKDLERFPSIVQKSAETLDPSGMASYLYDVSKSFSAFY---RDCPIVGTA- 573

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N +L   RL L     S++ SG++++ V     M
Sbjct: 574 SENERLAKARLALAQCTLSVLKSGMDLVLVPYLERM 609


>gi|295135663|ref|YP_003586339.1| arginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983678|gb|ADF54143.1| arginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 599

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 124/639 (19%), Positives = 232/639 (36%), Gaps = 101/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L  Y+KE    I      L+ +  +  R    G ++      + R +  +
Sbjct: 8   MNI----QEMLTGYVKEAVQNIY--DVTLETVEFQPTRKDFEGDVTI-VCFPMLRQVKTN 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ + E I   ++ +  + S F   KGF+N+ L+ +Y     + I           +   
Sbjct: 61  PVKLGEDIGKYLQENVTIVSRFNVVKGFLNILLNDAYYLDFFNEIKNDPDYGFVKELEDP 120

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E+ S N   P+H+GH R  ++G ++A ++  +G EV +   IND G  I    L+
Sbjct: 121 RKIMVEYSSPNTNKPLHLGHIRNNLLGFSVAEILEAAGNEVYKTQIINDRGIHICKSMLA 180

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + R+        + L      G Y     +E   +                       +
Sbjct: 181 -WQRFGNGETPESTGLKGDKLVGNYYVKFDQEYKAEIEKLIAEGKSEKEAKAEAPILVEA 239

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E+L   E     +VK +            +   AL +  D    E D +       +D+
Sbjct: 240 KEMLRKWEAGDAEVVKLWKTMNQWVYDGFEETYSALGVDFDKNYYESDTYLLG----KDV 295

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++     G  Y                 +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 296 VNQGLEDGVFYRK---------------EDGSVWIDLTDEGLD-EKIVLRSDGTAVYMTQ 339

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+     + E    + M+Y +G++   + K L  +   +    A     L   +     G
Sbjct: 340 DIGTAIQRVEDFAINGMVYTVGNEQDYHFKVLFLILKKLGFAWADYLYHLSYGMVDLPSG 399

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             +G  ++++ +
Sbjct: 400 ---KMKSREGTVVDADDLIQEMTETARTISEELGKLDGLSEEEKEELYKMIGLGALKYYI 456

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  +  +  + N   ++QY +AR +SI R+A         D    + + 
Sbjct: 457 LKVDPKKRILFNPEESVDF-QGNTGPFIQYTHARIQSILRKA---------DFEYESQLV 506

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E E    E +LI  +  YP  I+ A     P  +A Y YDL   F+  + +      + 
Sbjct: 507 SEYELQNKEKELIKQIQLYPETIQLAAENHSPALIANYTYDLVKEFNSFYQN------VS 560

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A       +R QL   VA+II S   ++G++ P+ M
Sbjct: 561 ILGAEKDMERQLRTQLSKMVANIIKSSFGLLGIQVPDRM 599


>gi|260061933|ref|YP_003195013.1| arginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88786067|gb|EAR17236.1| arginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 594

 Score =  330 bits (846), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 119/634 (18%), Positives = 238/634 (37%), Gaps = 97/634 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   ++E   +    +  L+ + ++  R    G + T     + R +  +P  I E
Sbjct: 3   LESVLTRGVREAVSREFGVE--LETVELQPTRKEFEGDI-TVVVFPMLRQVKGNPAAIGE 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I A +  + +  S +   KGF+NL +  ++  +  + +     +YG +   +   + +E
Sbjct: 60  AIGAYLAENLEEVSGYNVIKGFLNLVIDDAWYLEFFTRMRAD-ADYGLHTGARRGSILVE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +++ ++  +GY+V +   IND G  I    L+ + R+ 
Sbjct: 119 YSSPNTNKPLHLGHIRNNLLGYSVSEILKAAGYKVYKTQIINDRGIHICKSMLA-WKRFG 177

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-----------KWLPIVKD 235
                  S L      G Y     K   ++ +       +E           +   +++ 
Sbjct: 178 NGETPAQSGLKGDKLVGNYYVAFDKAYKEEIAELTAGGMDEKEAAKSAPILLEAQDLLRR 237

Query: 236 YS------VQAMMKI-------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +       V    K+            + L +  D    E D +       +D++ +   
Sbjct: 238 WEAGDPEVVDLWRKMNGWVYDGFEATYRNLGVDFDKLYYESDTYLLG----KDVVADGLE 293

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G  Y+                +   +    T  G D ++ +L++DG+  Y   D+    
Sbjct: 294 KGVFYKK---------------EDGSVWIDLTDEGLD-EKIVLRADGTAVYMTQDIGTAI 337

Query: 343 CKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
            ++    D   M+Y +G++   + K L  +   +    A+    L   +     G   KM
Sbjct: 338 QRFRDYPDITGMVYTVGNEQDYHFKVLFLILKKLGFSWAEHLYHLSYGMVDLPGG---KM 394

Query: 401 SKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKN 431
             R G  +    ++ E                             +G  ++++ +L    
Sbjct: 395 KSREGTVVDADDLMREMAATAESIGEEMGKLDGYTAEEKSALYHQIGLGALKYFILRVDP 454

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            + + F+  +  +  + N   ++QY YAR RSI R+A D +   D DL   +        
Sbjct: 455 KKRILFNPEESVDF-QGNTGPFIQYTYARIRSILRKAGDGYAVPDKDLLSLS-------L 506

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
              E QL+  L E+P V+  A     P  +A Y YDL   F+  +       ++  +   
Sbjct: 507 HEKEKQLLKDLLEFPEVVLQAAEQYSPALVANYTYDLVKNFNSLYQ------QVSILGEE 560

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      R+QL   V  ++  G  ++G+E P  M
Sbjct: 561 DAVHRNFRVQLTGEVGRVVARGCKLLGIEVPERM 594


>gi|261414873|ref|YP_003248556.1| arginyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371329|gb|ACX74074.1| arginyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325605|gb|ADL24806.1| arginine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 570

 Score =  329 bits (844), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 126/618 (20%), Positives = 228/618 (36%), Gaps = 81/618 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M  F           K +      +++   + +I  P D +HG+ +      L++ L   
Sbjct: 1   MNSFN------AEIAKALAATGAFDEEAALK-LISVPPDTSHGNYTIP-CFSLAKTLRKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGK 119
           P  IAE + A++++   +  V  A  G++N ++   +L K  L+ I   G+EYG      
Sbjct: 53  PKLIAEDLAAKVQLPAGLSKVE-AVNGYLNFFIDRGFLAKSTLNEIAAKGLEYGH-AASN 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V I++ S N    +   H R  ++G++LA +   +GY+V R  ++ D G     L +
Sbjct: 111 GKVVCIDYSSPNIGKELAFHHLRSTMIGNSLARIYKAAGYKVERINHLGDWGTAFGKLIV 170

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--VKDYS 237
                 ++ L  +++ L       + + +     A K    L +     +  +    ++ 
Sbjct: 171 MYL---REKLPTDEATLNALTVKELNILYASFSKASKEEPGLEDEARAAFTKLEQGDEFY 227

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPP 294
            +         LK L   +D+     D + G+      I  ++D L  +  +        
Sbjct: 228 RKLWTAFRAATLKELMRIYDMMGVGFDHYTGESFFEDKIPAVLDELREKNLL-------- 279

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMI 353
                   +   + ++       D     + KSDGS  Y   DLA     K E  FD  +
Sbjct: 280 -------VNSQERDVVMLDEF--DLNPCLIRKSDGSTLYATRDLAAAIYRKKEYNFDKCL 330

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRH 412
           YV+    + + K++  V   +  +  +    +   V L   DG   K   R G    LR 
Sbjct: 331 YVVDLGQALHFKQVFHVLKKMGREWYKDMYHIPFGVILQMVDGKWEKGKTRTGTASLLRD 390

Query: 413 VVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           V++                         ++G  ++ F  L     + + FD+       +
Sbjct: 391 VIEAAQKKILEFIDEKNPGLENKELIARQIGISALTFNDLKNSRLKDVRFDWD-AVMSFE 449

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   YVQ A+ R  SI R+A    P  D D             D +   LI  LA+   
Sbjct: 450 GDTGPYVQNAHVRLCSIMRKAGYTVPVADVDYAQ--------LTDDAAYSLINILAKKGE 501

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            I  A    EP  LA Y  ++A   H      R       V  +  +    RL LV +  
Sbjct: 502 KILAAVKDDEPSVLAQYALEIAEAAHKFIHEDR-------VLGSAEE--KSRLFLVQSTQ 552

Query: 568 SIINSGLNIIGVESPNEM 585
            ++ + L+++G+    +M
Sbjct: 553 IVLENVLDLLGLFPIRQM 570


>gi|218134083|ref|ZP_03462887.1| hypothetical protein BACPEC_01973 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991458|gb|EEC57464.1| hypothetical protein BACPEC_01973 [Bacteroides pectinophilus ATCC
           43243]
          Length = 588

 Score =  329 bits (844), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 129/626 (20%), Positives = 246/626 (39%), Gaps = 92/626 (14%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
             L + LK+   +   +++     V  RP  C       N AM  ++     P  IA+ +
Sbjct: 6   ELLTDELKKAFAECGYDEQYAKVTVSNRPDLCE---YQCNGAMAAAKAYKKAPFMIADDV 62

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            A++      + V     GFINL L   +L+  L+ +     +YG +  GK   V +++ 
Sbjct: 63  AAKLAGSEVFEKVESVKPGFINLSLGGEFLKNYLADMAKDD-KYGYSNAGKEKTVIVDYG 121

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
            AN   P+HVGH R AV+G+++  +  F+G +V  + ++ D G Q+  +   +  R  + 
Sbjct: 122 GANAAKPLHVGHLRSAVIGESIKRIQRFAGNKVIGDVHLGDWGLQMGLIIEELRDRKPEL 181

Query: 189 LYNNDSDLPEGYYPGVYLKHVGK---ELADKY------SSELLNFPEEKWLPIVK----D 235
           +Y +++      Y G Y K       EL + Y      S E   F E   L   K    D
Sbjct: 182 VYFDEN------YKGEYPKEAPFTISELEEIYPAASAKSKEDPAFMERAHLATAKLQNGD 235

Query: 236 YSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +  A+   I        + +   L++  D++  E D     P  I+ +ID+    G  +
Sbjct: 236 PACTAIWNHIMAVSKADLKKNYDNLDVTFDLWKGESDAQPYIPDMIQKMIDD----GIAH 291

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE- 346
           E       S+     D+  +      T   +     + KSDG+  Y  +DLA    + + 
Sbjct: 292 E-------SQGAIVVDIQEE------TDTKELPPCIVRKSDGAALYATSDLATLVEREKL 338

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAG 405
              D  IY+       +  ++   A          ++  L       +DG P K   R+G
Sbjct: 339 YSPDAYIYLADKRQELHFTQVFRTAKKAGIVPQDADMTFLGFGTMNGKDGKPFK--TRSG 396

Query: 406 DFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDF 439
             + L++++++                          VG  ++++  L  + S+   FD 
Sbjct: 397 GVMRLQYLIEDIDKAVYEKSSENRSMSEEEAKNTAKIVGLAALKYGDLSNQASKDYVFDI 456

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SIF +  +                 ++  + SE +L+
Sbjct: 457 DRFTSF-EGNTGPYILYTVVRIKSIFNKYAENGG-------RPEECSIDTAKNASEKKLM 508

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L ++  V E+A     P+KL  ++Y++A  F G +           +   + K     
Sbjct: 509 LSLVKFNEVFESAYKDNAPHKLCQFIYEVADAFGGFYHD------TMILAETDEKKKQGY 562

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           + L+    +++   L+++G+ +P  M
Sbjct: 563 IALLGLTRNVLECCLDLLGIRTPERM 588


>gi|302893154|ref|XP_003045458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726384|gb|EEU39745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 635

 Score =  329 bits (843), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 124/642 (19%), Positives = 237/642 (36%), Gaps = 105/642 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           + S +   L+EI       K I   I   +  D     L+  A     R  G  P  +AE
Sbjct: 36  YRSHITGLLQEIT--GVDPKIIYPAIQWTQTLDKGDAILAVPAL----RVKGKKPGELAE 89

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRN 115
             VA+    P ++    +G  FI+ +     L  +L   + +           G++   +
Sbjct: 90  EWVAKFPESPLIEKPTASGP-FISFFFKTDKLTSLLLPTIRNRSDSYGKNPYNGLKDPSD 148

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++ +EF S N   P H GH R  ++G  +ASL  +SG++V R  Y+ D G Q  
Sbjct: 149 PSAGKKRMIVEFSSPNIAKPFHAGHLRSTIIGGFIASLYEYSGWDVVRMNYLGDWGKQYG 208

Query: 176 TLALSV-FWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNF------ 224
            LAL+   W  ++AL  +  +     Y  + +    +    E   K   ++         
Sbjct: 209 LLALAWEKWGDEEALKADPINHLFNLYVRINVEMSDEKEAIEAKKKAGEDVTALLDASLD 268

Query: 225 ------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                        +E+ + + + +   ++++  +     LNI++D++  E      D   
Sbjct: 269 EQARKYFRRMTDGDEEAVKLWRRFRDLSIVRY-KKTYARLNIEYDVYSGESQVPESD--- 324

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + +    LA +    +         +        K L              L K DG+  
Sbjct: 325 MEEAAKVLAAKSLTEDADGAILIDFSKHVAGKQGKSL----------EKVILRKKDGTAL 374

Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   D++    +  +  FD++IYV+ S    ++K+L      +          + +  + 
Sbjct: 375 YLTRDISELLNRQKKYNFDHIIYVVASQQDLHLKQLFKTIELMGHDD------IAKKCQH 428

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEV----------------------------GSDSVR 423
              GM + MS R G    L  ++ +V                            G  SV 
Sbjct: 429 INFGMVLGMSTRKGTVKFLDDILRDVAEKMHDVMKKNENKYSQIENPEAVADILGISSVM 488

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
              +  K      FD   +    + +   Y+QYA+AR  SI R+A     D +       
Sbjct: 489 VQDMSGKRINNYKFDMDTMTSF-EGDTGPYLQYAHARLCSIRRKAG--LTDEELAAADFT 545

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           ++ ++   D     L+  L+++P V++N     EP  +  YL+ +  V    + H R   
Sbjct: 546 LLSEKHATD-----LVRLLSQWPDVVQNTLKTLEPTTILTYLFKMTHVLSSSYDHLR--- 597

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +  + ++L   R+ L  A   ++++G++++G+     M
Sbjct: 598 ----IVGSEKELQKARMALYDAARIVLHNGMSLLGLTPVERM 635


>gi|302386694|ref|YP_003822516.1| arginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197322|gb|ADL04893.1| arginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 589

 Score =  329 bits (843), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 120/626 (19%), Positives = 224/626 (35%), Gaps = 81/626 (12%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   +K        ++      +  RP  C       N AM  ++     P  
Sbjct: 1   MKKILDLITAEMKAAFADCGYDEAYAKVTLSNRPDLCE---YQCNGAMAAAKAYKKKPFD 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA   VA++       SV     GFINL L+  YL + +  +       G         +
Sbjct: 58  IASEAVAKLTGSHVFASVDAVMPGFINLKLNSDYLAEYVDGMAGQEQC-GCERTENPMTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+HVGH R A++G+++  +  F G++V  + ++ D G Q+  +   +  
Sbjct: 117 VVDYGGANVAKPLHVGHLRSAIIGESIKRMGRFLGHQVIGDVHLGDWGLQMGLIIEELKD 176

Query: 184 RYQ---------QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           R           +  Y  ++    G    +Y     K  +D+  S   +    K     +
Sbjct: 177 RKPELPYFDPSFEGEYPKEAPFTIGELEEIYPAASAKAKSDEEFSTRAHDATLKLQNGFR 236

Query: 235 DYS--VQAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            Y    Q ++++   DLK     LN+  D++  E D        I  +I  L  QG  YE
Sbjct: 237 PYRAIWQHIIEVSVADLKNNYGNLNVSFDLWKGESDAEPY----IAGLIKELEDQGLAYE 292

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY 345
                            +  L+      GD  + P   + KSDG+  Y  +DL     + 
Sbjct: 293 S----------------QGALVVDIAEEGDPKELPPCIVRKSDGAALYSTSDLGTIIERE 336

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIK---- 399
           +    D  IY+       +  ++  VA       + +    LC      +DG P K    
Sbjct: 337 KEIKPDWYIYLTDKRQELHFVQVFRVAKKAGFVSQDKKMSHLCFGTMNGKDGKPFKTRDG 396

Query: 400 --------------------MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
                               M  R             VG  ++++  L  + S+   FD 
Sbjct: 397 GVMRLETLISDISQAAYEKIMENRTVSEKEAEETSKIVGMAALKYGDLSNQASKDYVFDM 456

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SI  + + I      +               +E  L+
Sbjct: 457 DRFVSF-EGNTGPYILYTIVRIKSILAKYQGIEDKYQGEEKILAAAT------EAEKDLM 509

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L+ Y  ++E       P+K+  Y+Y+LA+ F+  +         + +   ++K     
Sbjct: 510 LQLSRYNEIMETGFTELAPHKICQYIYELANAFNRFYHD------TKIITEEDKKRQASW 563

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           ++L+     ++N+ + ++G+E+P  M
Sbjct: 564 VRLIGLAKDVLNACIGVLGIEAPERM 589


>gi|254293416|ref|YP_003059439.1| arginyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041947|gb|ACT58742.1| arginyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 610

 Score =  329 bits (843), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 127/653 (19%), Positives = 238/653 (36%), Gaps = 114/653 (17%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D ++ L   + +I   + +++K+     + R           N AM  ++    +P  
Sbjct: 1   MTDIANILSGAVGDIFEGLGLDRKLG---QVRRADRPDLADFQCNGAMAAAKAAKRNPRE 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +  +I+    V+SV +AG GF+N+ +S + L    + I+  G   G + +     V
Sbjct: 58  IAGEVAPKIEALELVESVDVAGPGFLNITVSAAALEGRTTEILADGKAGGGS-VETPRNV 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I+F   N   PMH+GH R  ++GD+L  L  F G +VT + ++ D G Q+  L + V  
Sbjct: 117 MIDFGGWNVAKPMHIGHLRSTIIGDSLQRLFRFLGDDVTSDVHLGDWGLQMGLLIVGVSE 176

Query: 184 RYQQALYNND---SDLPE------GYYPGVYLKHVGKELAD------------------- 215
                 Y +D    + PE           +Y  + GK  A+                   
Sbjct: 177 EQPDLPYFDDNFEGEYPEESPVSMDDLERLYPLYAGKMKAENTVETIEDGKTVYKKVPNP 236

Query: 216 KYSSEL----------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           +Y  ++          L      +  + K +     + + R+    L +Q D++  E D 
Sbjct: 237 EYREDVRALAQTATAELQAGRRGYRALWKQFCAVTQIGLERE-CGDLGVQFDLWKGESDA 295

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-- 323
           +   P  + D+                    K+ +         +       D  D P  
Sbjct: 296 NVLLPEIVEDL--------------------KSRKVAVESDGAWVIYVERESDKKDMPPF 335

Query: 324 -LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            LL S G+  Y A D+     +      D  +YV+ +  + + +++   A     +K   
Sbjct: 336 MLLNSQGAVGYHATDMGTILDRKRTNKPDLTLYVVDARQALHFEQVFRAAEIAGYEKEAS 395

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFIT-----------------------------LRH 412
              +       +DG P K   R G  +                                 
Sbjct: 396 LEHIGFGTMNGKDGKPFK--TREGGVLKLHDFIQQAKDKARERLEETGMGADFSAEERAD 453

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + D+V   +++F  L    ++   FD  +     +     Y+ YA  R +S+ R+AK+  
Sbjct: 454 IADKVALAAIKFADLSNVRTKNYVFDLDQFV-AFEGKTGPYLLYAAVRVKSLMRRAKEEG 512

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                      V          E  L + L  +   ++ A   + P+ +  ++Y+LA  F
Sbjct: 513 I----------VAGAMKIELKEERVLALQLDAFEGALKLAYANRTPHGICDHVYNLAQAF 562

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              W++    P L+    ++  +   RL L  A    + +GL++IG+E+P  M
Sbjct: 563 SSFWTN---APILKAGVPDD--VKASRLALAQATLKQLETGLSLIGIETPERM 610


>gi|332827351|gb|EGK00111.1| arginyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 598

 Score =  328 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/619 (19%), Positives = 234/619 (37%), Gaps = 63/619 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             +RL+  + +    +  +     +  +++ +    GHL T       +     P   A 
Sbjct: 3   IEARLQENVIKGIETLYGQTISSGQASLQKTKKEFEGHL-TLVVFPFVKMSKKGPEQTAR 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +  +      F   KGF+NL +S +   + L+S+        + +      V +E
Sbjct: 62  EIGEWLVANTSEVESFNVIKGFLNLTISGACWLQELNSVRSVANYGIQEIKADAPLVMVE 121

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G  L+ ++  +G  V +   +ND G  I    L+ + ++ 
Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGFALSEVLKANGKRVLKTNIVNDRGIHICKSMLA-WQKWG 180

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                  S     +  G Y       L D++    L   +E  LP  +  +   +M   R
Sbjct: 181 NGETPESSGKKGDHLVGDYYV-----LFDRHYKAELAELQEGGLPKEEAEAQSKLMGEAR 235

Query: 247 DDLKAL-----NIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKT 298
           + L+       +  +   +     + G     + +    + +  +   Y           
Sbjct: 236 EMLRRWEAGDTDTVYLWKMMNSWVYAGFDETYKKLGVDFNEIYYESETYLDGKETVLDGL 295

Query: 299 TQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYV 355
            +     ++     + +  D +D + LL+SDG+  Y   D+   + +++   D   MIYV
Sbjct: 296 KRGVFYRKEDGSVWADLTADGLDHKLLLRSDGTSVYMTQDIGTAQQRFKAHKDLSEMIYV 355

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +G++ + + + L  V   +  +  +  V     +    +G   KM  R G  +    +V+
Sbjct: 356 VGNEQNYHFQVLSIVLDKLGYEFGKGLVHFSYGMVELPEG---KMKSREGTVVDADDLVE 412

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             VG  ++++ +L     + + F+  K     
Sbjct: 413 EMISTAKVTSEELGKLDGATEDEANNIARIVGMGALKYFILKVDPKKNMTFNP-KESIDF 471

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   ++QY YAR +S+ R+A D    +   L      P +      E  LI   AEY 
Sbjct: 472 NGNTGPFIQYTYARIQSVIRKAGDQGLSIPLSL------PTDIVLTPKEENLIQLAAEYA 525

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V++ A     P  +A Y+Y+L   ++  +           ++  N  L   RL L   V
Sbjct: 526 AVVKQAGDEYNPALIANYIYELVKEYNQFYHD------YTILKEENAALRDFRLVLSQEV 579

Query: 567 ASIINSGLNIIGVESPNEM 585
             I+ SG++++G+E P+ M
Sbjct: 580 GKIVKSGMSLLGIEVPDRM 598


>gi|253315750|ref|ZP_04838963.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 343

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 192/374 (51%), Gaps = 32/374 (8%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA+K+  E+ ++ EE  L   +   V+  M  +++DL   N   D + SE   +  +  
Sbjct: 2   DLAEKH-PEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EKG 58

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I +++  +   GY YE                       R+T   DD DR L+K+DG+Y
Sbjct: 59  EILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGTY 102

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           TYF  D+AY   K +RG D +I + G+DH GY+ RL+A          ++ + + ++VRL
Sbjct: 103 TYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRL 162

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             +G  +KMSKR G+ ITLR ++DEVG D+ R+ +  R      DFD    KEQS++NPV
Sbjct: 163 MENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPV 222

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +Y QYA+AR  SI +QAK+   ++        +       +   ++L+  +A++   IE+
Sbjct: 223 YYAQYAHARICSILKQAKEQGIEVTAANDFTTI------TNEKAIELLKKVADFEPTIES 276

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A   +  +++  Y+ DLA+ FH  ++  +       V  ++ + T   + ++ AV   + 
Sbjct: 277 AAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAVRITLK 329

Query: 572 SGLNIIGVESPNEM 585
           + L ++GV +P  M
Sbjct: 330 NALAMVGVSAPESM 343


>gi|89099438|ref|ZP_01172314.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085824|gb|EAR64949.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 562

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 125/612 (20%), Positives = 239/612 (39%), Gaps = 88/612 (14%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +LK    E   ++  ++     +  +IE P++ AHG L+      L++ +   P  IA  
Sbjct: 3   KLKAIFTEALWELFEDRLTAAELAGLIEVPKNTAHGDLAFP-CFTLAKKMKQAPAVIAAE 61

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
              +++    +D     G  ++N++ S      +IL S++ +G  YG + +G G  + I+
Sbjct: 62  AAGKLQ-HSLIDQAEAHGP-YLNIFFSKEKVGLEILQSLLEAGSLYGNSSVGTGKTITID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           F + N   P  +GH R  V+G++++ +    GYEV R  ++ D G Q   L  +   W  
Sbjct: 120 FSAPNIAKPFSMGHLRSTVIGNSISLIAEKCGYEVIRINHLGDWGTQFGKLITAYKKWGT 179

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMM 242
            + +     + P      +Y++       +      L     +W   ++   D +     
Sbjct: 180 PRTVK----EKPIAELFKLYIRFH----EEAEKDPDLENEARRWFRELERGNDEAFALWS 231

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299
               + LK  N  +++     D + G+      +   ++ L  +  + +       S+  
Sbjct: 232 WFREESLKEFNRIYELLGISFDSYNGEAFYNDKMEKAVELLQSRNLLTQ-------SEGA 284

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
               ++   L              + KSDG+  Y   DLA    + E   F   +YV+G 
Sbjct: 285 AVVTLEEHGL----------PPCLIKKSDGATLYATRDLAAAIFRQETYRFSESLYVVGQ 334

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           + S + ++L+ V   +  + A+    +   + L +DG   KMS R G  + L  V++E  
Sbjct: 335 EQSVHFRQLKLVLKKLGFQWAENMHHIPFGLYL-KDGK--KMSTRKGRVVLLEDVLNEAV 391

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  VG  +V F  L       +DF   ++     E    Y
Sbjct: 392 ELAYENICRKNPSLEQKEETAAAVGIGAVLFHDLKNDRLNHIDFSLEEMLTFEGE-TGPY 450

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY  AR  SI ++A                  ++   D     L+  L+ +   IE A 
Sbjct: 451 IQYTNARASSILQKAGTAGR------------MEQGLSDPYSWDLLKQLSLFTGKIEEAH 498

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A Y+ ++A  F+ ++   R       ++         RL LV AV+ ++  G
Sbjct: 499 KHYSPSVIAKYIINVAQSFNKYYGQIRILDDTPGLE--------TRLSLVRAVSLVLEEG 550

Query: 574 LNIIGVESPNEM 585
           L ++G+ +P +M
Sbjct: 551 LRLLGIAAPKKM 562


>gi|238879357|gb|EEQ42995.1| arginyl-tRNA synthetase [Candida albicans WO-1]
          Length = 622

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 130/640 (20%), Positives = 242/640 (37%), Gaps = 102/640 (15%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +   F + +   L  I     V+K I+ +  ++ P+    G +      +  R  G++P
Sbjct: 29  NVVDVFRNYIAEELNRISS---VDKSIIIQ-ALDTPKVLDQGDIIVPIPKL--RLKGINP 82

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVS-GIEYGRNLIGK 119
              ++           +    I  +G F+  Y + + L  ++   V+    +YG   +G 
Sbjct: 83  NEKSKEWAENFNKGKFIS--EIKPQGVFLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGV 140

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K  +EF S N   P H GH R  ++G  +++L    G++VTR  Y+ D G Q   LA+
Sbjct: 141 GKKAIVEFSSPNIAKPFHAGHLRSTIIGGFISNLYEKVGWDVTRINYLGDWGKQFGLLAV 200

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLK---HVGKELADKYSS----------------- 219
             F RY           P  +   VY+K    V KE ++                     
Sbjct: 201 G-FERYGDESKLASD--PINHLFEVYVKINQDVTKETSEATGETPAETIDASEQDEKKIQ 257

Query: 220 -----------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                        +   +E  L I   +   ++ K + D    LNI++D++  E    + 
Sbjct: 258 SSTNEEARRFFRRMEDGDESALKIWARFRDLSIEKYV-DTYGRLNIKYDVYSGESQVPQ- 315

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KS 327
               +++       +G +                D+DR   L   T     + + L+ KS
Sbjct: 316 --EKMKEATKLFEDKGLI----------------DIDRGAKLIDLTKFNKKLGKALVEKS 357

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------ 380
           DG+  Y   D+     +YE   FD MIYV+ +    +  +   +   +  + A       
Sbjct: 358 DGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQDLHCAQFFEILKQMGFEWAHNLEHVN 417

Query: 381 ------------INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFM 425
                         V L  +++  ++ M   M K    +  +     + D +G  +V   
Sbjct: 418 FGMVQGMSTRKGTVVFLDNILQETKEKMHEVMQKNEEKYAQIEDPDKIADLIGISAVMIQ 477

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            +  K     +F + ++    + +   Y+QYA++R  S+ R++     +L+   F   V 
Sbjct: 478 DMQSKRIHNYEFKWDRMTSF-EGDTGPYLQYAHSRLCSMQRKSGISIEELEHANFDLLVE 536

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           P  S        L   LA+YP VI+ A    EP  +  YL+ +  +    +        +
Sbjct: 537 PCAS-------ALARTLAQYPDVIKKAVKGLEPSTIVTYLFSVTHIVSQCYD-------I 582

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +V    + + + RL L  A   +IN+G+ ++G+   N M
Sbjct: 583 LWVSGQEKDVAIARLALYEAARQVINNGMTLLGLTPVNRM 622


>gi|68475091|ref|XP_718431.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
 gi|68475632|ref|XP_718164.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
 gi|46439920|gb|EAK99232.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
 gi|46440196|gb|EAK99505.1| likely Arginyl tRNA synthetase [Candida albicans SC5314]
          Length = 643

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 129/631 (20%), Positives = 239/631 (37%), Gaps = 98/631 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
            +NY+ E   +I    K +    ++ P+    G +      +  R  G++P   ++    
Sbjct: 55  FRNYIAEELHRISSVDKSIIIQALDTPKVLDQGDIIVPIPKL--RLKGINPNEKSKEWAE 112

Query: 71  RIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFV 128
                  +    I  +G F+  Y + + L  ++   V+    +YG   +G G K  +EF 
Sbjct: 113 NFNKGKFIS--EIKPQGVFLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFS 170

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P H GH R  ++G  +++L    G++VTR  Y+ D G Q   LA+  F RY   
Sbjct: 171 SPNIAKPFHAGHLRSTIIGGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FERYGDE 229

Query: 189 LYNNDSDLPEGYYPGVYLK---HVGKELADKYSS-------------------------- 219
                   P  +   VY+K    V KE ++                              
Sbjct: 230 SKLASD--PINHLFEVYVKINQDVTKETSEATGETPAETIDASEQDEKKIQSSTNEEARR 287

Query: 220 --ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
               +   +E  L I   +   ++ K + D    LNI++D++  E    +     +++  
Sbjct: 288 FFRRMEDGDESALKIWARFRDLSIEKYV-DTYGRLNIKYDVYSGESQVPQ---EKMKEAT 343

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAA 336
                +G +                D+DR   L   T     + + L+ KSDG+  Y   
Sbjct: 344 KLFEDKGLI----------------DIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTR 387

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--------------- 380
           D+     +YE   FD MIYV+ +    +  +   +   +  + A                
Sbjct: 388 DVGEAIKRYETYKFDKMIYVIAAQQDLHCAQFFEILKQMGFEWAHNLEHVNFGMVQGMST 447

Query: 381 ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSEL 434
                V L  +++  ++ M   M K    +  +     + D +G  +V    +  K    
Sbjct: 448 RKGTVVFLDNILQETKEKMHEVMQKNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHN 507

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            +F + ++    + +   Y+QYA++R  S+ R++     +L+   F   V P  S     
Sbjct: 508 YEFKWDRMTSF-EGDTGPYLQYAHSRLCSMQRKSGISIEELEHANFDLLVEPCAS----- 561

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L   LA+YP VI+ A    EP  +  YL+ +  +    +        + +V    + 
Sbjct: 562 --ALARTLAQYPDVIKKAVKGLEPSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKD 612

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL L  A   +IN+G+ ++G+   N M
Sbjct: 613 VAIARLALYEAARQVINNGMTLLGLTPVNRM 643


>gi|323692123|ref|ZP_08106367.1| arginyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503810|gb|EGB19628.1| arginyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 593

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 119/632 (18%), Positives = 232/632 (36%), Gaps = 89/632 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   LK        ++K +   +  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIVDLIIEELKPAFTGCGYDEKFIRVTLSNRPDLCE---YQCNGAMAAAKAYKKKPID 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V ++K       +     GFIN+ L+P YL   ++ +  S  +YG         +
Sbjct: 58  IANELVEQLKDSSMFSEINAVMPGFINIRLNPEYLAGYVNRM-ASDEKYGLEEAKDPETI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+HVGH R AV+G+++  +  + G++   + ++ D G Q+  +   +  
Sbjct: 117 IVDYGGANVAKPLHVGHLRAAVIGESIKRICRYMGHKTIGDVHLGDWGLQMGLIIEELHD 176

Query: 184 RYQQALYNND---SDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           R  + +Y ++    + PE           +       A + +     F E       K  
Sbjct: 177 RQPELVYFDETFQGEYPEEAPFTISELEEIYPTASAKAKEKTEAGEAFKERAQEATFKLQ 236

Query: 237 S----VQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
           +     +A+   I        + +   L +  D++  E D     P  I D+I     +G
Sbjct: 237 NGYKPYRAIWNHIMNVSLADLKKNYDNLKVYFDLWKGESDAQPYIPGLINDLI----EKG 292

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYF 341
             YE                    L+      GD  + P   + KSDG+  Y  +DLA  
Sbjct: 293 LAYES----------------EGALVVDVAQEGDAKEYPPCIVRKSDGASLYATSDLATI 336

Query: 342 KCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIK 399
             +  E   D  IYV+      +  ++  VA      K    ++      +  ++G P K
Sbjct: 337 IEREKEYQPDRYIYVVDKRQELHFVQVFRVAKKAGIVKEDTQMIFLGFGTMNSKEGGPFK 396

Query: 400 MSKRAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSE 433
              R G  + L  ++                          + +G  ++++  L  + ++
Sbjct: 397 --TRDGGVMRLEQLIRDINGEVYKKIQEKQKVPENEMERTAEIIGLAALKYGDLSNQATK 454

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              FD  +     + N   ++QY   R +SI  + +++              P       
Sbjct: 455 DYVFDVERFISF-EGNTGPHIQYMIVRIKSILEKYEELKGK------DAEWQPIRPAQSV 507

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +L + L  +  +IE A     P+K+  Y+ DLA  F+  +         + +   + 
Sbjct: 508 SEKELQLELCRFGEIIETAFAETAPHKICQYMADLADAFNNFYLEN------KIIAEEDA 561

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + L+     I+++ ++++G+ESP  M
Sbjct: 562 CKQASFISLITLTKEILDTCMDLLGMESPEHM 593


>gi|255532212|ref|YP_003092584.1| arginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345196|gb|ACU04522.1| arginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 593

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 124/640 (19%), Positives = 243/640 (37%), Gaps = 102/640 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +         ++  +    +++ ++  R    G ++      + R     
Sbjct: 1   MNI----EQHIIASTIAAVKELYHQDLPENQVSLQDTRTEFEGQITI-VVFPIVRFSKKS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A  +   +         F   KGF+NL ++ +Y   + ++ ++            G
Sbjct: 56  PEVTAADLGEYLVQHIPEIRTFNVIKGFLNLSIADAYWLNLFNTSLLDPSFAAIKP--NG 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+ S N   P+H+GH R  ++G ++A L+   GYEV +   +ND G  I    L+
Sbjct: 114 KKVMVEYSSPNTNKPLHLGHVRNNLLGYSVAELLKADGYEVIKVNLVNDRGIHICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS----SELLNFPEEKWLPIVKDY 236
            + ++        + L   +  G Y     KE   +              +K  P++K+ 
Sbjct: 174 -WQKWGNGETPESALLKGDHLVGKYYVIFDKEYKKEIDTLKLEGQTEEEAKKNAPLIKEA 232

Query: 237 ------------SVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                        V  + K +            K L +  D +  E + +       +D 
Sbjct: 233 QKMLLDWEAGVPEVIDLWKKMNGWVYAGFDVSYKNLGVDFDKYYYESNTYLLG----KDT 288

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +D    +G  ++                    +    T  G D  + +L++DG+  Y   
Sbjct: 289 VDEGLEKGIFFKKP---------------DGSVWIDLTEDGLD-QKLVLRADGTSVYITQ 332

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394
           DL   + KY+    D  IYV+G++   + K L  +   + +  A+ ++ L   +V L   
Sbjct: 333 DLGTAQMKYDDFKMDESIYVVGNEQDYHFKVLFLILEKLGKSWAKGLHHLSYGMVDLPSG 392

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
               KM  R G  +    +V E                             +G  ++++ 
Sbjct: 393 ----KMKSREGTVVDADDLVAEMIETARAKTEILGKVNDFEEKEKKELFYNIGLGALKYF 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L  +  + L FD  +  +  + N   ++QY +AR +S+  +A       D+D   + V 
Sbjct: 449 LLKVEPKKRLLFDPSESIDF-QGNTGPFIQYTHARIKSLLSKA-------DYDFSAKGV- 499

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
             ++    +EL++I+ LA+YP  I +A  A  P  LA YLY++A +F+  +         
Sbjct: 500 -SDASITGTELEMIMLLAKYPAEIASAAKAYSPATLANYLYEVAKLFNKFYHETP----- 553

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             ++  N  + + RL L    A ++  G+ I+G+  P  M
Sbjct: 554 PIIKEENETVKLYRLNLSFVTADVLKRGMRILGITVPERM 593


>gi|323486738|ref|ZP_08092058.1| hypothetical protein HMPREF9474_03809 [Clostridium symbiosum
           WAL-14163]
 gi|323399957|gb|EGA92335.1| hypothetical protein HMPREF9474_03809 [Clostridium symbiosum
           WAL-14163]
          Length = 593

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 121/632 (19%), Positives = 237/632 (37%), Gaps = 89/632 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   LK        ++K +   +  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIVDLIIEELKPAFTGCGYDEKFIRVTLSNRPDLCE---YQCNGAMAAAKAYKKKPID 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V ++K       +     GFIN+ L+P YL   ++ +  S  +YG         +
Sbjct: 58  IANELVEQLKDSSMFSEINAVMPGFINIRLNPEYLAGYVNRM-ASDEKYGLEEAKDPETI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+HVGH R AV+G+++  +  + G++   + ++ D G Q+  +   +  
Sbjct: 117 IVDYGGANVAKPLHVGHLRAAVIGESIKRICRYMGHKTIGDVHLGDWGLQMGLIIEELHD 176

Query: 184 RYQQALYNND---SDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           R  + +Y ++    + PE           +       A + +     F E       K  
Sbjct: 177 RQPELVYFDETFQGEYPEEAPFTISELEEIYPTASAKAKEKTEAGEAFKERAQEATFKLQ 236

Query: 237 S----VQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
           +     +A+   I        + +   L +  D++  E D     P  I D+I     +G
Sbjct: 237 NGYKPYRAIWNHIMNVSLADLKKNYDNLKVYFDLWKGESDAQPYIPGLINDLI----EKG 292

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYF 341
             YE                    L+      GD  + P   + KSDG+  Y  +DLA  
Sbjct: 293 LAYES----------------EGALVVDVAQEGDAKEYPPCIVRKSDGASLYATSDLATI 336

Query: 342 KCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIK 399
             +  E   D  IYV+      +  ++  VA      K    ++      +  ++G P K
Sbjct: 337 IEREKEYQPDRYIYVVDKRQELHFVQVFRVAKKAGIVKEDTQMIFLGFGTMNSKEGGPFK 396

Query: 400 MSKRAGDFITLRHVV--------------------------DEVGSDSVRFMMLWRKNSE 433
              R G  + L  ++                          + +G  ++++  L  + ++
Sbjct: 397 --TRDGGVMRLEQLIRDINGEVYKKIQEKQKVPENEMERTAEIIGLAALKYGDLSNQATK 454

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              FD  +     + N   ++QY   R +SI  + +++      D   + + P +S    
Sbjct: 455 DYVFDVERFISF-EGNTGPHIQYMIVRIKSILEKYEELKGK---DAERQPIRPAQS---V 507

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +L + L  +  +IE A     P+K+  Y+ DLA  F+  +         + +   + 
Sbjct: 508 SEKELQLELCRFGEIIETAFAETAPHKICQYMADLADAFNNFYLEN------KIIAEEDA 561

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 + L+     I+++ ++++G+ESP  M
Sbjct: 562 CKQASFISLITLTKEILDTCMDLLGMESPEHM 593


>gi|114797992|ref|YP_761395.1| arginyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123128508|sp|Q0BYP8|SYR_HYPNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114738166|gb|ABI76291.1| arginyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 589

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 120/603 (19%), Positives = 212/603 (35%), Gaps = 92/603 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + R           N AM  ++  G +P  IA  I AR+K    V S  +AG GFINL +
Sbjct: 28  VRRSDKPELADFQCNGAMAAAKAAGKNPREIAGEIAARLKEHASVLSAEVAGPGFINLRV 87

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S + L       V      G           I+F  AN   PMHVGH R AV+GDTL  +
Sbjct: 88  SDAALSARA-EHVRGDAMAGAEKAADAAVTVIDFGGANVAKPMHVGHLRSAVIGDTLQRI 146

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---------DSDLPEGYYPGV 204
             F+G EVT + ++ D G Q+  L   ++      +Y +         +  +       +
Sbjct: 147 CRFAGDEVTSDVHLGDWGLQMGHLVTELYDEQPGLIYFDAAYTGPYPAEPPVTIDDLGRL 206

Query: 205 YLKHVGKELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y +   K  AD   +E       +       +  +++ + ++  ++ ++ D   LN+  D
Sbjct: 207 YPQASNKAKADAARNERSQKAVAEMQAGRPGYRALLRHF-IEVSIEALKLDYGFLNVSFD 265

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           ++  E D        I  +++   + G                  +     L+       
Sbjct: 266 LWKGESDV----DGLIPGLVERFKQAGL----------------AEESDGALIVHVARET 305

Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVA 371
           D  + P   L+ S G   Y   DLA    + +      + M+YV+    + + +++   A
Sbjct: 306 DKKEMPPVMLVNSRGGTGYHTTDLATILDRMDTLTTTPERMLYVVDQRQALHFEQVFRAA 365

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV------------------ 413
             +          +        DG P K   R G  + L  +                  
Sbjct: 366 GMLGLIAEDKLEHIGFGTVNGADGKPFK--TREGGVLRLADLQAMAMEEAEKKLSAANLP 423

Query: 414 -----------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                        +V   ++RF  L    +    FD  +     +     Y+ YA  R +
Sbjct: 424 ADMGDAERFDVAKKVAVAALRFSDLMNTRTTNYVFDLERFTSF-EGKTGPYLMYAAVRVK 482

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+ R+A +        +            + +E  L++ L  +   +  A   + P+ L 
Sbjct: 483 SVLRKAAENGHSAGKVVVT----------EDAERTLVLQLDGFGAALLGAREKRMPHILC 532

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +LY LA  F   ++       L      + +    RL L   V   + +GL ++G+  P
Sbjct: 533 EHLYGLAQAFSSFYAA------LPIAAEADGEKRASRLALADGVRHQLETGLELLGIAVP 586

Query: 583 NEM 585
             M
Sbjct: 587 ERM 589


>gi|50744720|ref|XP_419847.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 579

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 132/627 (21%), Positives = 237/627 (37%), Gaps = 101/627 (16%)

Query: 7   FSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMI--------LSRPL 57
           F   +   L E +D   +   K +  + + R R  A      + A I        L++ L
Sbjct: 6   FRRSIARQLSEVLDLPPENLIKSISAVPVSRKRHDA--DFQLSVASIEEGGSSDCLAQDL 63

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNL 116
            L     A+ +  ++K D  V  +   G G +N  ++   L K  L  ++  G +YG   
Sbjct: 64  QLR----AQKLAEKLKCDAVVSEIS-TGPGTVNFTINRELLAKTVLQQVLKDGTQYGTKS 118

Query: 117 ----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                    K  +EF S N     H+GH R  ++G+ +A+L    G+EVTR  Y+ D G 
Sbjct: 119 ELFSTVPKQKAVVEFSSPNIAKKFHIGHLRSTIIGNFIANLKVALGHEVTRINYLGDWGM 178

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKYSSEL---LNFPE 226
           Q   L +  F ++        S L   +   VY+   K    E   K + +    L   +
Sbjct: 179 QFGLLGVG-FQQFGDKEKLKSSPLQ--HLFEVYVQINKAAADEKTKKLAKDFFRKLEEHD 235

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E+ L + K++   ++ +  R   K L +  D +  E  +         +++  L  +G +
Sbjct: 236 EQALSLWKEFRDFSIKEYTRI-YKRLGVHFDEYSGESFYQE----KSWEVLKMLEDKGLL 290

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY- 345
            +        K T   D+  K+ L   +         +++SDG+  Y   DLA    +  
Sbjct: 291 QKTT------KGTGVVDLSEKKDLSSLST--------VIRSDGTSLYITRDLAAAIDRMN 336

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +  +D MIYV   + S + + L  +   +        V  C+ V     G+   M  R G
Sbjct: 337 KYNWDTMIYVTDRNQSSHFQHLFQILKLMGYDW----VERCQHVSF---GLVQGMKTRKG 389

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD---------------------------FD 438
           + I L  V+DEV S  +  M   +   E+ D                           F 
Sbjct: 390 EVIFLEDVLDEVRSRMLENMASAKTTKEVEDPVETAEKVGLAALIIQDFRGLLSSDYQFS 449

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + +   QS+ +   ++QY +AR  S+ +   +          P   I      +   + +
Sbjct: 450 WDRAL-QSRGDTGVFLQYTHARLHSLEQMHGNE---------PVTDINVACLQEPDAISV 499

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           + HL  Y  V+  ++   +P  +  YL  L+ +            R   V+ +   L   
Sbjct: 500 LQHLLRYDEVLYRSSQDLQPKHIVSYLLTLSHL-------AAVAHRTLPVKGSTPALAQA 552

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A  S++ +G+ ++G+     M
Sbjct: 553 RLCLFQATRSVLANGMKLLGITPVTRM 579


>gi|209875223|ref|XP_002139054.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209554660|gb|EEA04705.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 603

 Score =  328 bits (840), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 131/642 (20%), Positives = 239/642 (37%), Gaps = 111/642 (17%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD-----P 61
                   +K +  + + E  I          +   G    N+ M++   +G       P
Sbjct: 8   IKEVFNKSIKSLFPEYENEAVISIS-------NPNFGDYQCNSGMLIFSTIGKSMGMKSP 60

Query: 62  LTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI------- 110
             I E I   I  DP+     DS+ +A +GFI + +S  +LRK L +I+  G        
Sbjct: 61  REIGEKIKQFIMSDPNSNFLFDSIIVAPQGFITVKISTDFLRKNLQNILQRGEIQVTLSS 120

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
              + +  K  KV ++F S N    MHVGH R  ++GDT+  +  + GYEV R  ++ D 
Sbjct: 121 SPVKIIEDKKLKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRIFEYLGYEVFRINHVGDW 180

Query: 171 GAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--- 225
           G Q   L   +  +Y     N    SDL E Y           E   +    ++      
Sbjct: 181 GTQFGMLIEYLKEQYPDYTSNIPEISDLQEFYRSAKKKFDQDPEFKLRSQKVVVKLQGGD 240

Query: 226 --EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                    + + S     K+       LNI  + +  E  ++      I ++I  +  +
Sbjct: 241 PTARAAWKKICEISRIEFQKV----YDRLNIHIEEY-GESFYN----DLIPEVILKMKEK 291

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
           G +                  D  Q +F S     ++    +KSDG Y Y + DLA    
Sbjct: 292 GIIQLD---------------DGAQCIFTSVN---NIPLMAVKSDGGYGYDSTDLAAIYY 333

Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIK 399
           + +    D +IY+  S    +  ++  VA  +      K +++ +    V    DG   K
Sbjct: 334 RLKEIRADWVIYITDSGQEEHFLKIFEVAKIMEWHNPPKTRLDFV-GFGVIQGEDGK--K 390

Query: 400 MSKRAGDFITLRHVVDE------------------------------------VGSDSVR 423
              R+GD + L  ++DE                                    +G  +V+
Sbjct: 391 FKTRSGDTVKLVELLDEAVTRAYNELINRRLQNAKINGNIEYEDDDLKEMAKKIGYAAVK 450

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPR 482
           +  + +       F F ++ +  K N   Y+ YAYAR  +IFR++  ++    D ++   
Sbjct: 451 YFDMKQNRLTNYKFSFDRMLD-PKGNTAVYLLYAYARLCAIFRRSGLNLDNKSDIEILSS 509

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             I  +    + E  + + +  +P V +   +     +L  Y Y+L  +    ++  R  
Sbjct: 510 YSINIQQ---SEERLIALKIIRFPEVFDGIIVDLHINRLTEYCYELCELVAQFYASCR-- 564

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                +  N+ ++   RL L   +  ++   LN++G+E   +
Sbjct: 565 ----ILDCNDPEIRQSRLALCFIIKKVLLVALNLLGIEPLEK 602


>gi|326334850|ref|ZP_08201051.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692887|gb|EGD34825.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 589

 Score =  327 bits (839), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 122/613 (19%), Positives = 223/613 (36%), Gaps = 101/613 (16%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D I I++ R    G   T     L + +  +P  I E + A +K    +    +  KGF
Sbjct: 22  IDNIEIQQTRKEFEGDF-TLVLFPLLKYIKANPQEIGEKLGAYLKERTPIVGYNVV-KGF 79

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL +  SY   I +SI+         +      V +E+ S N   P+H+GH R  ++G 
Sbjct: 80  LNLTIMDSYFLSIFNSILSQKDYGKIPVTADAPAVIVEYSSPNTNKPLHLGHIRNNLLGF 139

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-- 206
           ++A ++  +G  V +   IND G  I    L+ +  +        + +    + G Y   
Sbjct: 140 SMAKILEATGKRVYKTQIINDRGIHICKSMLA-WQLFGNGETPQSTGIKGDKFVGKYYVL 198

Query: 207 -KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD----------------- 248
                KE   +  S+  +  E +    +   + Q + +  + D                 
Sbjct: 199 FDKAYKEQVAELVSQGKSKEEAERQAPIFQQAQQMLRRWEKGDAQILALWKQMNQWVYDG 258

Query: 249 ----LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L +  D    E + +       +DI+      G  Y                 
Sbjct: 259 FEVTYHNLGVSFDRNYYESETYLLG----KDIVQKGLESGVFYRK--------------- 299

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHS 361
           +   +    T  G D ++ +L+SDG+  Y   DL     + E  F     MIY +G++  
Sbjct: 300 EDGSVWIDLTEEGLD-EKLVLRSDGTSVYITQDLGTATKRIEDDFPNITGMIYTVGNEQD 358

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + K L  +   +    A+    L   +    +G   KM  R G  +    ++ E     
Sbjct: 359 YHFKVLFLILQKLGYSWAKNLYHLSYGMVELPNG---KMKSREGTVVDADDLMQEMVSVA 415

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +G  ++++ +L     + + F+  +  +  + N   
Sbjct: 416 QGLSQELGKLEGYTEQQKQELYHIIGLGALKYYILKVDPKKKIAFNPEESIDF-QGNTGP 474

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY YAR RSI R+                + P      + E QLI  L  +P VI+NA
Sbjct: 475 FIQYTYARIRSIMRKG------------IYEISPVYIPLHSKEKQLIKLLMIFPEVIQNA 522

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y+YDL   F+  + +      L  +   +     +R  L   V  +I +
Sbjct: 523 ATTYNPALIANYVYDLVKEFNSFYQN------LSILGEEDFLKRALRYHLSSKVGEVIAT 576

Query: 573 GLNIIGVESPNEM 585
           G +++G++ P  M
Sbjct: 577 GFDLLGIQVPERM 589


>gi|325279315|ref|YP_004251857.1| Arginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324311124|gb|ADY31677.1| Arginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 596

 Score =  327 bits (839), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 122/635 (19%), Positives = 223/635 (35%), Gaps = 97/635 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L   + E   +        D++ ++  R    G L T      +R     P    +
Sbjct: 3   IESLLTTKVIEAVKQCYDADVDKDKVQLQATRKEFAGDL-TVVVFPFTRFSKKSPEETGK 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +   +K   +    +   KGF+N+ +S +Y   +L+  V    +YG      G    IE
Sbjct: 62  ELGGYLKQHIEEIKDYNVVKGFLNIEISAAYWVGVLNE-VAQDPKYGYVHENSGHSYMIE 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +++ +   +G+EV     +ND G  I    ++ + ++ 
Sbjct: 121 YSSPNTNKPLHLGHIRNNLLGWSVSEIQKANGHEVRMVNLVNDRGIHICKSMIA-WKKFA 179

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK-----------------------YSSELLN 223
                  +     ++ G Y     KE   +                        + E+L 
Sbjct: 180 NGATPESTGTKGDHFVGDYYVRFDKEYKAEIKALMEKEGMEEEEAKKKAPILLEAQEMLR 239

Query: 224 FPEEKWLPIVKDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             E      V  +      ++K   +  + + +  D    E   ++      RDI+    
Sbjct: 240 KWEAGDEETVSLWRTMNDWVLKGFDETYRLMGVGFDKVYFESQTYKKG----RDIVLKGL 295

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
             G +Y                 +   +    T  G D  + LL+ DG+  Y   D+   
Sbjct: 296 ADGVLYRK---------------ETGSVWADLTGDGLD-HKLLLRDDGTSVYMTQDIGTA 339

Query: 342 KCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIK 399
             ++ E   D MIYV+G++ + + + L  +   +    A +I  L   +V L       K
Sbjct: 340 YERFNEFDMDEMIYVVGNEQNYHFQVLSLICGKLGFPWADKIKHLSYGMVELPEG----K 395

Query: 400 MSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRK 430
           M  R G  +    ++ E                             V   ++++ +L   
Sbjct: 396 MKSREGTVVDADDLMAEMIDTARETSQELGKLDGYSEAEAEEVYRKVALGALKYFILKVD 455

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + + F+  K       N   ++QY YAR +S+ R+A D                   +
Sbjct: 456 PKKTMMFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAADAG-------ASPLSADTHIQ 507

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
               E  LI  +A+ P V++ A     P  LA Y YDLA  F+  +           ++ 
Sbjct: 508 LSEKEQNLIKLVAKLPDVVKEAGTTYSPALLANYAYDLAKEFNQFYHD------FSILKE 561

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            N  L   RL L       I + + ++G+E P  M
Sbjct: 562 ENEALRNFRLLLAKQCGEAIKNAMGMLGIEMPERM 596


>gi|255070885|ref|XP_002507524.1| arginyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226522799|gb|ACO68782.1| arginyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 646

 Score =  327 bits (839), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 119/630 (18%), Positives = 221/630 (35%), Gaps = 100/630 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL------- 59
               +K    E    + + +  L  + I    +   G    N+AM +   L         
Sbjct: 64  LREIVKAAFSEAVTAV-LSRGTLVDVNISECSNNVVGDYQCNSAMPIFAELKQKGDTSFS 122

Query: 60  DPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-----YG 113
           +P ++AE IV  I   +       +AG GF+N+  S S+L   +   VV+  +       
Sbjct: 123 NPRSLAEAIVEAIPGREHLFAQTSVAGPGFVNVTFSASFLAAGVLDTVVNSTDEKIRIPP 182

Query: 114 RNLIGKGTKVNIEFVSANPTG--PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +  +    +  +++ S N      MHVGH R  ++G+T+   +   G E  R  ++ D G
Sbjct: 183 QRNMSIPKRAVVDYSSPNIAKASEMHVGHLRSTIIGETICRALESFGVETVRLNHVGDWG 242

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKW 229
            Q   L   +    Q       +DL E Y           +   +  S ++     + + 
Sbjct: 243 TQFGMLLTHLHDM-QMGSDFAITDLQEFYKVAKLRFDKDDDFKARAQSAVVRLQAGDVQM 301

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVY 287
             + ++     + +I R D + +    DI I E    F+      I  ++D L ++G   
Sbjct: 302 RKLWEE-----ICEISRRDFEEIYRVLDISIIERGESFYN---EIIPLVLDELVKKGIAV 353

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YE 346
           E                D+  L     +  +       KSDG + Y + DLA    +  +
Sbjct: 354 E----------------DQGALCIFGNL--ESTPLICRKSDGGFNYASTDLAALWQRTTQ 395

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKMS 401
              D +IYV     S + + +   A        + N       +   + +  DG   +  
Sbjct: 396 LEADQIIYVTDVGQSKHFEAIFDAANRAGWLDKKDNTKIRLDHVGFGLVMGEDGK--RFR 453

Query: 402 KRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSEL 434
            R+G  + LR ++ E                           +G  +V++  L    S  
Sbjct: 454 TRSGGTVPLRSLLSEAQSRCLESLQTRSSDLDDKELLEASHIMGIAAVKYADLHNNRSTN 513

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             F + ++ +  K N   Y+ Y +AR  ++  +A+      D DL       Q    D  
Sbjct: 514 YVFSYDRMLDM-KGNTAVYLLYTHARISTLLSRAE------DQDLTSPA--HQMVFTDEK 564

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L V + + P  +        P +L  Y Y L   ++  +S  +       V  +  +
Sbjct: 565 ERALAVAILKLPDALRAVVQDLLPSRLCDYAYHLCVAYNEFYSTCK-------VIGSPEE 617

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNE 584
               RL L  A    +   L ++G+   ++
Sbjct: 618 --KSRLILCRATVFSLRRALFVLGITPLHK 645


>gi|227540420|ref|ZP_03970469.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239744|gb|EEI89759.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 594

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 115/639 (17%), Positives = 237/639 (37%), Gaps = 99/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M  F      L ++  +   ++   +    +I ++  R    G ++      +++     
Sbjct: 1   MSQF--IEKALIDHTVQAVHELYQAEIQPSQIALQETRKEFEGQITI-VVFPITKFSKKS 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P      +   ++      S F   KGF+N+ LS +Y  ++L+S +++           G
Sbjct: 58  PEQTGTEVGEFLQSRIPELSGFNVIKGFLNVSLSDNYWIELLNSTLLASDFGCFPA--NG 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E+ S N   P+H+GH R  ++G ++A ++   GY+V +   +ND G  I    L+
Sbjct: 116 KKLMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAYGYDVIKANLVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            + ++        S L   +  G Y     K   K++ +  +        +K  P++++ 
Sbjct: 176 -WQKFGNGETPASSGLKGDHLVGKYYVIFDKEYKKQIDELKAEGQTEEEAKKNAPLIREA 234

Query: 237 SVQAMMKI--------------------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                                              L +  D +  E + +       +DI
Sbjct: 235 QEMLQQWEAGDQQVIELWSTMNGWVYSGFEKTYNQLGVDFDKYYYESNTYLLG----KDI 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I      G  ++                +   +    T  G D  + +L+ DG+  Y   
Sbjct: 291 IQEGLDSGVFFKK---------------EDNSVWIDLTDEGLD-QKLVLRGDGTSVYITQ 334

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL   + KY+    +  IYV+G++   + K L  +   + +  A     L   +     G
Sbjct: 335 DLGTAQLKYDEFHMNESIYVVGNEQDYHFKVLFLILKKLGKSWASGLFHLSYGMVDLPSG 394

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             +G  ++++ +
Sbjct: 395 ---KMKSREGTVVDADDLMSEMVETAKERTEELGKTEGFSETEKAELYNTIGMGALKYFL 451

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + L FD  +  +  + +   ++QY +AR +S+  +A                + 
Sbjct: 452 LKVDPKKRLLFDPNESVDF-QGHTGPFIQYTHARIKSVLNKAG---------FSEATPVT 501

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           + +   + E  LI  L  +P VIE +     P +LA Y+YD+A +++  +          
Sbjct: 502 KPASISSYERDLIQVLGNFPVVIEASAKEFSPAQLANYIYDVAKLYNKFYHEE------S 555

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++A   ++   RL L    A +I+ G+N++G++ P  M
Sbjct: 556 ILKAEEEEVKNFRLHLSATAARVISKGMNLLGIQVPERM 594


>gi|16127589|ref|NP_422153.1| arginyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236405|ref|YP_002518842.1| arginyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|39932235|sp|Q9A347|SYR_CAUCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|254782950|sp|B8H4W0|SYR_CAUCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13425063|gb|AAK25321.1| arginyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965578|gb|ACL96934.1| arginyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 600

 Score =  327 bits (838), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 119/638 (18%), Positives = 220/638 (34%), Gaps = 104/638 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           LK  L E          +      +             N A+  ++    +P  IA  +V
Sbjct: 4   LKRSLSEAAAAAFQAAGLPPEFGRVTASDRPDLADFQCNGALAAAKSAKRNPREIAVQVV 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             +K DP + SV IAG GFIN+ +S   L       + S    G  L+    +V I++  
Sbjct: 64  DILKGDPRLASVEIAGVGFINMRVSDEALSARARE-IASDDRTGAQLLETPRRVLIDYAG 122

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--Q 187
            N   PMHVGH R +++G+++  L  F G +V  + +  D G Q+  L  ++        
Sbjct: 123 PNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHFGDWGFQMGLLISAIMDEDPFIN 182

Query: 188 ALYNNDSDLPEGY------------------------YPGVYLKHVGKELADKYSSELLN 223
           AL     + P G+                        YP   ++        + + +   
Sbjct: 183 ALMEKLPEAPRGFSSADEAKVMAEFEKRITLADLDRIYPAASVRQKEDPAFKERARKATA 242

Query: 224 FPEEKWL--PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             +       ++  + V      +  +  AL +  D++  E D +      I  ++  L 
Sbjct: 243 ELQNGRFGYRLLWRHFVNVSRVALEREFHALGVDFDLWKGESDVN----DLIEPMVLQLE 298

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
            +G + +                D+   + R    GD  D P   ++ S+GS  Y   DL
Sbjct: 299 AKGLLVQ----------------DQGARIVRVAREGDKRDVPPLLVVSSEGSAMYGTTDL 342

Query: 339 AYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           A    + +  FD   ++Y +    + + + +   A      +      +        DG 
Sbjct: 343 ATILDRRK-SFDPHLILYCVDQRQADHFETVFRAAYLAGYAEEGALEHIGFGTMNGADGK 401

Query: 397 PIKMSKRAGDFITLRHVVD-----------------------------EVGSDSVRFMML 427
           P K   RAG  + L  +++                             +VG  +++F  L
Sbjct: 402 PFK--TRAGGVLKLHDLIEMAREKARERLREAGLGAELSEEQFEDTAHKVGVAALKFADL 459

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                    FD  +     +     Y+ Y   R +S+ R+A +             V  +
Sbjct: 460 QNFRGTSYVFDLDRFTSF-EGKTGPYLLYQSVRIKSVLRRAAESG----------AVAGR 508

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               + +E  L + L  +   ++ A   + P  +A + Y LA  F   ++          
Sbjct: 509 VEIHEPAERDLAMLLDAFEGALQEAYDKKAPNFVAEHAYKLAQSFSKFYAAC------PI 562

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A+   L   RL L       +   L+++G+E+P  M
Sbjct: 563 MSADTETLRASRLTLAETTLRQLELALDLLGIEAPERM 600


>gi|297622706|ref|YP_003704140.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297163886|gb|ADI13597.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 607

 Score =  326 bits (837), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 138/646 (21%), Positives = 248/646 (38%), Gaps = 106/646 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D   +LK  L+     +  E +    + ++   +   G   +  A  L+R L  +P  IA
Sbjct: 2   DVKIQLKAALERAVRALGTEAE----VTVQAVPEGKAGDYGSPVAFGLARVLRKNPAAIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +V R+++   V      G  ++N +L P    + +       +E    L  +G KV +
Sbjct: 58  QELVERLELPAGVARAEAVGP-YLNFHLDPGAFVRGV-------VEGELALPERGKKVIV 109

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFW 183
           E  S NP    HVGH R  V+GD +A ++  +GYEV  + YI+D G Q      A+  F 
Sbjct: 110 EHTSVNPNKEAHVGHLRNIVLGDAVARILRAAGYEVEVQNYIDDTGRQAAESLFAVGYFG 169

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                    D  L + Y      K    E  ++  S+ ++  E   L       ++ +++
Sbjct: 170 ATYDGAEKYDHWLGKLYVRLTQAKETDAETIERGVSQTMHRLERGEL----RGEIERVLR 225

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              +   AL  ++D+ + E D  +     +   ++ L R     E +  P + K      
Sbjct: 226 AQLETYHALGAEYDLLVWESDIVK--SGFLARALEVLKRS----EDVFTPSEGKYAGALV 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-----------YER----- 347
           MD  +L+       ++    L++SDG+  Y A D+     K           + R     
Sbjct: 280 MDVSKLI----PGLEEPLVVLVRSDGNAMYVAKDIGTQFWKVGLFEGLRFRRFHRQPSGK 335

Query: 348 -------------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSE---KKAQINVLL 385
                                D ++ V+ +  S + + +   A  +++        + L 
Sbjct: 336 PLYTSAPEGDLHPDGRTFAHADAVVNVIDTRQS-HPQMIVKAALEMADAARGADASHHLA 394

Query: 386 CELVRLYRDGMPIKMSKRAG-------------------------DFITLRHVVDEVGSD 420
            E+V L        MS R G                             +  V  +VG  
Sbjct: 395 YEVVTL----EGQAMSGRKGITLAIDTVLAEAAKRARAVVEEKNPGLKAVDEVARQVGVG 450

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++RF ML  +   ++DF + +     + +   YVQYA+AR  SI R A +        ++
Sbjct: 451 ALRFAMLKSEARRVIDFRWEQALSL-QGDSAPYVQYAHARACSILRAACEAGVGESGAVW 509

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH-G 539
            R            E++L   LA  P +I +A     P+ +  Y  D+A+ ++ +++H G
Sbjct: 510 ER--------LGPLEVKLAQELARLPEIIGSAARDFAPHLVGQYCLDVATAWNAYYNHRG 561

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      V      L   RL LV  V   + + L ++G+E+P EM
Sbjct: 562 ADGKPDTQVLKAEPGLREARLALVRKVKETLATSLGLLGIEAPEEM 607


>gi|27904724|ref|NP_777850.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29611877|sp|P59483|SYR_BUCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|27904121|gb|AAO26955.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 578

 Score =  326 bits (836), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 121/619 (19%), Positives = 236/619 (38%), Gaps = 75/619 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S  +K  L  I   I  E      + I R  D        N  + L+  L  +
Sbjct: 1   MTIKSIISKHIKKVLNIIKIFITHE-----DLAIVRTSDKKVWDYQVNGIIKLANNLNKN 55

Query: 61  PLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           P  +++ I++ ++         +  +  GFIN++++ ++L K L+  + S     + +  
Sbjct: 56  PYVLSKYIISNMRYYEYKMYKKITASKLGFINIFINKTWLEKELTKKIKSFRLGIKKVTP 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K   + I++ S N    MHVGH R  ++GD  A ++ F G+ V R  +I D G     + 
Sbjct: 116 KN--IIIDYSSPNVAKKMHVGHLRSTILGDATARILEFLGHNVMRINHIGDWGTHFGMII 173

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDY 236
             +   +      N  DL E Y        +  E + K  + ++     +++ + I K  
Sbjct: 174 AYLKQNFISYNEINQLDLNELYQKAKVNFDLDSEFSKKTRNYVVKLQKKDKECIRIWKKI 233

Query: 237 SVQAMMKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             + + +  +   K LN+       + E  ++   P  I+D+      +           
Sbjct: 234 VKKTITENQKI-YKKLNVTLTNKHIVGESFYNDMLPDIIQDLKTKKIAK----------- 281

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353
           +        +++ +        G  +   + K DG++ Y   DLA  K + E    D ++
Sbjct: 282 QCNGAYIVFLNKFK-----NRDGAPMGVIIQKQDGAFLYSTIDLACLKYRCEVLRADQIL 336

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           Y + S    Y+K++  +A         I +   E   +         S R+G+ I L  +
Sbjct: 337 YFIDSRQKEYLKQILEIAKKAGYISNNIIIRHNEFGMIC-SKNKRPFSTRSGNNIILSDL 395

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++E                           +G  ++++  L +       F + ++    
Sbjct: 396 INEAIKRAKKIAKNKNKNLSNKELEYLSEKIGIGAIKYFDLSKNRLTDYIFKWDEILTFD 455

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QYAY R  SIF++      ++       N+I  E      E +L + L ++ 
Sbjct: 456 -GNTAPYMQYAYIRILSIFKKL-----NISMLKLSGNIILTELL----ENKLAIKLFQFE 505

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +I  +     P+ +  YLY+L+ +F   +            ++ N K+   RL L    
Sbjct: 506 EIILESLQHSAPHIICKYLYELSKIFSKFYEKC------SIYKSKNTKIRKNRLLLSLLT 559

Query: 567 ASIINSGLNIIGVESPNEM 585
           A  +  GL IIG+ +   M
Sbjct: 560 ARTLKKGLFIIGISTIKYM 578


>gi|254166583|ref|ZP_04873437.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596239|ref|YP_003482935.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624193|gb|EDY36754.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534026|gb|ADD08373.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 550

 Score =  326 bits (836), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 142/618 (22%), Positives = 253/618 (40%), Gaps = 101/618 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + + F  R    L+ I   ++VE+                G   T     L++ +  +
Sbjct: 1   MDIISIFRDRANAMLRNIGINMEVEEA-----------KENFGDF-TLPCFSLAKEMKKN 48

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ I  ++K D   + +   G  ++N ++    L ++    ++SG  +      K 
Sbjct: 49  PALIAKDIAEKLK-DEYFEKIEAVGP-YVNFWIHTRKLAELTLQEILSGEIF---KFQKR 103

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E  SANPTGP+HVG  R +++GD+LA +M   GY+V  +Y++ND G Q+ TL   
Sbjct: 104 EKVIVEHTSANPTGPLHVGRTRNSIIGDSLARVMRKYGYDVEVQYFVNDVGKQVATLLWG 163

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNFPEEKWLPIV 233
           +     + +   + D    Y    Y +   +EL                    ++ L  +
Sbjct: 164 I-----KNIKIEEKDTRGDYRYVPYYQAAYRELEKNPKIEEEIQEIIWKYERGDEELRKM 218

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +  V +++K I + LK +NI  D FI E        +  RD+ D+L             
Sbjct: 219 AEKYVGSVLKGIEESLKNINIHFDSFIWESSL----VNRARDVADSLKDY---------L 265

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            +       D+    +        +  DR  L + DG+  Y   D+AY   K ER     
Sbjct: 266 KEDDGAFYIDLKELGV--------EGKDRLYLFRRDGTTLYPLRDIAYHLLKGER-ARKN 316

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + V+G DH  + + ++ +   ++E   +++ L    V+L       KMS R G  + L  
Sbjct: 317 VDVLGEDHKLHFQAIKKIVEILNEN-IELDALFYSFVKLPEG----KMSTRQGKVVYLDD 371

Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           ++ E                         +   ++RF +L  +  + + F +        
Sbjct: 372 LLKEAEARVNEIIKNREYEKEEMEKIRRAIAVGAIRFHILNVQEEKPMTFRWEDALNFEG 431

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           E+   ++QY +AR  SI R+                    +      E++L+  +A+YP 
Sbjct: 432 ES-APFIQYTHARAASILRKTNWNGEY-----------SIDYISHPQEIKLLKLMAKYPS 479

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++ENA     PY +A Y Y LAS F+  +   R+ P L+     +      RL +V A  
Sbjct: 480 MVENAVRRLSPYIMARYAYTLASQFNQFY---RDCPVLK----ADDNTRNTRLAIVKAFK 532

Query: 568 SIINSGLNIIGVESPNEM 585
            +I   L ++G+E+P +M
Sbjct: 533 KLIKDVLELLGIEAPEKM 550


>gi|300776117|ref|ZP_07085976.1| arginine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505250|gb|EFK36389.1| arginine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 586

 Score =  326 bits (836), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 119/639 (18%), Positives = 241/639 (37%), Gaps = 107/639 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  L E+   +   K I  ++ ++  +    G  +      L + L  +
Sbjct: 1   MNI----KDIIEQKLSEVILNVYQLKDI--KLEVQENKTEFEGDFTI-VTFPLVKQLKKN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P +I   +   +    ++   F   KGF+N+ +      ++      S  E    +  K 
Sbjct: 54  PESIGVELGEALTEQTELFESFNVVKGFLNVKVKN----QLFVDNFRSVSENFSTIEKKN 109

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  +GY+V +   IND G  I    L+
Sbjct: 110 ATVMVEYSSPNTNKPLHLGHIRNNLLGFSVAQILKEAGYDVIKTQIINDRGIHICKSMLA 169

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-- 234
            + ++        ++     + G Y     K+  KE+A+     +     +K  P++K  
Sbjct: 170 -WEKFGNGETPETANTKGDKFVGNYYVEFDKNYKKEIAELVEQGVGEEQAKKEAPVMKEA 228

Query: 235 ----------DYSVQAMM--------KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V+A+         K   +  K L +  D    E + +      I++ 
Sbjct: 229 QKMLLDWENGDEKVRALWAEMNSWVYKGFNETYKRLGVDFDQVQYESNTYILGKDLIQEG 288

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +D    +G +Y+                +   +    T  G D  + LL+SDG+  Y   
Sbjct: 289 LD----KGVLYQK---------------EDGSVWCDLTDEGLD-QKLLLRSDGTSVYMTQ 328

Query: 337 DLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL     ++++     +IY +G++   + + L  +   +  + A     L   +    +G
Sbjct: 329 DLGTAVERFKQNDIQKLIYTVGNEQDYHFQVLFKILKKLGYEWADQLYHLSYGMVELPEG 388

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             VG  ++++ M
Sbjct: 389 ---KMKSREGTVVDADDLMQEMYETAKSKAQELGKLETLSEEEKEASYETVGLGALKYFM 445

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  +  +    N   ++QY YAR +S+  +A  +  +            
Sbjct: 446 LKVDPKKKMLFNPAESIDF-NGNTGPFIQYTYARIQSLLSKAGALQAE-----------T 493

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E E + SE +LI+ LA +  V+  +     P  +A Y+YDL   ++  + +        
Sbjct: 494 AEIELNQSEKELIMQLANFKTVVAKSAETLSPALVANYVYDLVKTYNSFYQNN------P 547

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   + K+   RL +    A  I   L ++G+ + N M
Sbjct: 548 ILNQEDEKIKQFRLNISDITAKTIKKSLELLGIGTVNRM 586


>gi|300771210|ref|ZP_07081086.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761880|gb|EFK58700.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 594

 Score =  326 bits (835), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 115/639 (17%), Positives = 236/639 (36%), Gaps = 99/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M  F      L ++  +   ++   +    +I ++  R    G ++      +++     
Sbjct: 1   MSQF--IEKALIDHTVQAVHELYQAEIQPSQIALQETRKEFEGQITI-VVFPITKFSKKS 57

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P      +   ++      S F   KGF+N+ LS +Y   +L+S +++           G
Sbjct: 58  PEQTGTEVGEFLQSRIPELSGFNVIKGFLNVSLSDNYWIDLLNSTLLASDFGCFPA--NG 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E+ S N   P+H+GH R  ++G ++A ++   GY+V +   +ND G  I    L+
Sbjct: 116 KKLMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAYGYDVIKANLVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            + ++        S L   +  G Y     K   K++ +  +        +K  P++++ 
Sbjct: 176 -WQKFGNGETPASSGLKGDHLVGKYYVIFDKEYKKQIDELKAEGQTEEEAKKNAPLIREA 234

Query: 237 SVQAMMKI--------------------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                                              L +  D +  E + +       +DI
Sbjct: 235 QEMLQQWEAGDQQVIQLWSTMNGWVYSGFEKTYNQLGVDFDKYYYESNTYLLG----KDI 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I      G  ++                +   +    T  G D  + +L+ DG+  Y   
Sbjct: 291 IQEGLDSGVFFKK---------------EDNSVWIDLTDEGLD-QKLVLRGDGTSVYITQ 334

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL   + KY+    +  IYV+G++   + K L  +   + +  A     L   +     G
Sbjct: 335 DLGTAQLKYDEFHMNESIYVVGNEQDYHFKVLFLILKKLGKPWASGLFHLSYGMVDLPSG 394

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             +G  ++++ +
Sbjct: 395 ---KMKSREGTVVDADDLMSEMVETAKERTEELGKTDGFSETEKAELYNTIGMGALKYFL 451

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + L FD  +  +  + +   ++QY +AR +S+  +A                + 
Sbjct: 452 LKVDPKKRLLFDPNESVDF-QGHTGPFIQYTHARIKSVLNKAG---------FSEATPVT 501

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           + +   + E  LI  L  +P VIE +     P +LA Y+YD+A +++  +          
Sbjct: 502 KPASISSYERDLIQVLGNFPVVIEASATEFSPAQLANYIYDVAKLYNKFYHEE------S 555

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++A   ++   RL L    A +I+ G+N++G++ P  M
Sbjct: 556 ILKAEVEEVKNFRLHLSATAARVISKGMNLLGIQVPERM 594


>gi|289449921|ref|YP_003475106.1| arginine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184468|gb|ADC90893.1| arginine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 578

 Score =  325 bits (833), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 121/625 (19%), Positives = 229/625 (36%), Gaps = 89/625 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  D    +   L  +      E +      IE P     G  +      L++ +   P 
Sbjct: 1   MSVDIKKHIAVELAALCNMQPDEMEAF----IEIPPQTDLGDYALP-CFKLAKTMHKAPP 55

Query: 63  TIAELIVARIKID-PDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKG 120
            IA  +   I    P++  +   G G++N +L+ S Y+++ +  ++              
Sbjct: 56  VIATELAGGIAGKLPELTEIRQTG-GYLNFFLNRSSYIKETIGKVLTDPHAVFPTADLHD 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +EF S N   P H+GH    ++G  +A++   +GY V +  ++ D G Q   L ++
Sbjct: 115 KTVLVEFSSPNIAKPFHIGHAFTTILGQVIANMYQTAGYNVVKLNHLGDYGTQFGKLIVA 174

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPI 232
              W   +AL  +    P      +Y+K   +       E   +++ + L     +   +
Sbjct: 175 YRLWGDAKALETD----PIKELLRIYVKFHKEAKEKPELENQARFAFKCLEEGRPEEKAM 230

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            + +   ++++  R     L I+ D +  E  +       I  +++ L ++G + E    
Sbjct: 231 WQKFRDLSLVEFNRV-YDRLGIKFDNYNGESFY----SDKIPAVVEMLRQKGLMVE---- 281

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
              S   Q   +D  +L              +LKSDG+  Y + DLA    +     F  
Sbjct: 282 ---SDGAQVVQLDDLKL----------PPCIILKSDGTTIYASRDLAAILYRDATWHFYK 328

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            IYV+G+  + + +++ AV        A     +   +  + +G   KMS R GD I L 
Sbjct: 329 NIYVVGTPQALHFRQVFAVLKKAGYDCADRCEHVGFGLVKFPEG---KMSTREGDVIFLE 385

Query: 412 HVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
            ++ E                               VG  +V +  L       + F + 
Sbjct: 386 DLLSEAVAKTFEIIRKNAAERYEDMSEAEQADIAEKVGLGAVTYAFLRNGRERDIVFSWE 445

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++    + +   Y+QY YAR  S+ R+A  +             +   S  + SE  L  
Sbjct: 446 EMLNF-EGDTAPYLQYTYARAHSMLRKAGVVNAKEQL----LAAVAAGSLNEESEFNLCR 500

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
            +        NA    EP  LA  +  +A  F+  ++          ++A   +L   RL
Sbjct: 501 QIEALAAAFNNALKNNEPSILAKQINAVAHAFNKFYTEC------PILKAEG-ELRTSRL 553

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
            L  A    +  GL+I+ ++    M
Sbjct: 554 ALAMATCFALKQGLSILNIQVVERM 578


>gi|151944039|gb|EDN62332.1| mitochondrial arginyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
          Length = 643

 Score =  325 bits (833), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 121/598 (20%), Positives = 227/598 (37%), Gaps = 96/598 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 96  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 150

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 151 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 210

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K +  +
Sbjct: 211 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INMD 266

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I   +   ++   I      LNI  D
Sbjct: 267 LAKEEINGNSKCGISGEARSFFKNLENGDENAIKIWNRFRSLSIHHYI-QTYSRLNINFD 325

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 326 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 366

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 367 KRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 426

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 427 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 479

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++    +  K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 480 DNPQRVADLIGVSAIIIQDMKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 538

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + D   D+             +  +   ++L+  LA+YP V+  A   QEP  +  YL+ 
Sbjct: 539 SSDFTTDM------LIHADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFK 592

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +       +  +V      + + RL +  A   ++++ ++++G+   + M
Sbjct: 593 VCHQVSSCY-------KKIWVSGKPADIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643


>gi|320160730|ref|YP_004173954.1| arginyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994583|dbj|BAJ63354.1| arginyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 587

 Score =  324 bits (832), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 122/633 (19%), Positives = 243/633 (38%), Gaps = 96/633 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIE---RPRDCAHGHLSTNAAMILSRPLGL 59
           +F     +++  + +I     + +K L  I +     P + A G ++     + ++   +
Sbjct: 1   MFEAEKQQIEEKILQI-----LSEKGLQDIKLTWGWIPFNGAWG-MAAPFFPVAAQEARM 54

Query: 60  D-----P---LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGI 110
                 P     +AE +   +      + V  A KG++NLY S S Y ++++  ++  G 
Sbjct: 55  GKKVQVPVRAQELAEEVAQALGKPAGFERVE-AVKGYLNLYFSSSEYAQRVIDQVLEEGS 113

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E+G+        + +EF   N     HVGH R A++GD+++ ++ F+GY+V R  Y  D 
Sbjct: 114 EFGKGPSLNQQVM-VEFSQPNTHKAFHVGHLRSAILGDSISRILEFAGYDVIRANYPGDI 172

Query: 171 GAQINTLALSVFWRYQQALYNNDSD------LPEGYYPGVYLKHVGKELADKYSSELLNF 224
           G  +    +   W Y +                   Y     +       +     L   
Sbjct: 173 GLHV----IKWLWNYMKFHNGEKPPAGATTRWMGDLYAEANRRLEENPELESEVRALYAR 228

Query: 225 PEEKWLPIVKDYSVQAMMKII--RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            +++   IV+ +       +   R+  + L+I+ DI+             + ++I     
Sbjct: 229 WDKRDPEIVRLWEETREWSLQGFREMYRTLDIRFDIYYFNSMVEHPGKEVVEELIQKGIA 288

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           Q    EG +     +     +   + L              +L+SD +  Y   DLA  K
Sbjct: 289 QDERPEGPVIVKLDELLGLKEEKYRVL-------------VILRSDNTALYATEDLALAK 335

Query: 343 CKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIK 399
            K+          YV+    S + +++         + A +   +  ELV L  +   + 
Sbjct: 336 RKFSDYPNLYRSYYVVDVRQSLHFQQVFKTLELAGYEWANRCQHIPYELVNLPGN---VV 392

Query: 400 MSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNS 432
           M+ R G  + L  ++ E                           VG  ++++ ML R+N+
Sbjct: 393 MASREGTVVLLEDLIREATARALQVVEEKNPELLPEQKQQVAQAVGIGAIKYPMLARENT 452

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           +++ FD+    + + +    Y+QYA+ R  SI R+A  +    + +              
Sbjct: 453 KIVTFDWQTALDFNGQ-AAPYIQYAHVRASSILRKAGGVPLHAEVNY----------PMM 501

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +ELQLI  ++ +P+ ++ A    +P  +A   Y+LA  F   ++          V    
Sbjct: 502 PAELQLIDLISRFPKEVQRAASELKPLHIANAAYELAKTFSDFYNEC-------PVLTAE 554

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   RL+LV A    I + L ++G+++P  M
Sbjct: 555 EPVRNGRLRLVAATRQTIANALGLLGIQAPEVM 587


>gi|6321883|ref|NP_011959.1| Msr1p [Saccharomyces cerevisiae S288c]
 gi|308153546|sp|P38714|SYRM_YEAST RecName: Full=Arginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Arginine--tRNA ligase; Short=ArgRS; Flags:
           Precursor
 gi|487937|gb|AAB68931.1| Msr1p: Arginyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|190405873|gb|EDV09140.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207344651|gb|EDZ71722.1| YHR091Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|285810000|tpg|DAA06787.1| TPA: Msr1p [Saccharomyces cerevisiae S288c]
          Length = 643

 Score =  324 bits (832), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 121/598 (20%), Positives = 227/598 (37%), Gaps = 96/598 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 96  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 150

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 151 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 210

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K +  +
Sbjct: 211 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INMD 266

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I   +   ++   I      LNI  D
Sbjct: 267 LAKEEINGNSKCGISGEARSFFKNLENGDENAIKIWNRFRSLSIHHYI-QTYSRLNINFD 325

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 326 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 366

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 367 KRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 426

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 427 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 479

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++    +  K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 480 DNPQRVADLIGVSAIIIQDMKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 538

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + D   D+             +  +   ++L+  LA+YP V+  A   QEP  +  YL+ 
Sbjct: 539 SSDFTTDM------LIHADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFK 592

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +       +  +V      + + RL +  A   ++++ ++++G+   + M
Sbjct: 593 VCHQVSSCY-------KKIWVSGKPADIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643


>gi|126662120|ref|ZP_01733119.1| arginyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625499|gb|EAZ96188.1| arginyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 595

 Score =  324 bits (832), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 116/623 (18%), Positives = 232/623 (37%), Gaps = 66/623 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L    +  ++  + E+          ++++  +  R    G + T     L + L  +
Sbjct: 1   MTLHQTLTVHIQKAVLELF------NISIEKVEFQATRKEFEGDV-TMVVFPLVKALKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I   I   +  +    + F    GF+N+ +S +Y  +  +SI  +            
Sbjct: 54  PVEIGNQIGNYLVANIHEVAKFNVVGGFLNIVISDAYYIEFFNSIKNNETFGFLAPKEGE 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L+
Sbjct: 114 KAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAEIIKASGKKVYKTQIINDRGIHICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + ++        + L      G +     K+   + +  +     E     +    ++A
Sbjct: 174 -WQKFGNGQTPESTGLKGDKLVGNFYVEFDKQYKKEIAELIAQGKTEDEAKKLAPSILEA 232

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-----IDNLARQG--YVYEGILPP 293
              ++  +     +           + G     +++     I N        + + ++  
Sbjct: 233 QQMLLDWENGKPEVIELWKTMNQWVYDGFEQTYKNLGVNFNIPNYYESNTYLLGKEVVQF 292

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--N 351
              K   + D D   +    T  G D  + +L+SDG+  Y   D+     + +   D   
Sbjct: 293 GLEKGIFEKDPD-GSVWIDLTADGLDR-KIVLRSDGTAVYMTQDIGTAIQRVKDFPDVGG 350

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           M+Y +G++   + K L  +   +    A     L   +     G   KM  R G  +   
Sbjct: 351 MVYTVGNEQDYHFKVLFLILKKLGFDWADSLYHLSYGMVELPSG---KMKSREGTVVDAD 407

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++ E                             +G  ++++ ML     + + F+  + 
Sbjct: 408 DLMAEMTTTAQAISEELGKLEGYSESEKSKLYTTIGLGALKYYMLKVDPKKQMMFNPEES 467

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            + +  N   ++QY YAR +SI R+A   F ++        V   E E    E +LI  +
Sbjct: 468 VDFA-GNTGSFIQYTYARIQSILRKADFDFENV--------VTSSEVEMHEKEKELIKQV 518

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +P VI+NA     P  +A Y YDL   F+  +       ++  +   N    + R+QL
Sbjct: 519 QLFPEVIQNAAENHSPALIANYTYDLVKEFNSFYQ------QVSILGEENHDKKVFRVQL 572

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             +V + I +   ++G+E P  M
Sbjct: 573 SKSVGNTIKNAFQLLGIEVPERM 595


>gi|256839001|ref|ZP_05544511.1| LOW QUALITY PROTEIN: arginyl-tRNA synthetase [Parabacteroides sp.
           D13]
 gi|256739920|gb|EEU53244.1| LOW QUALITY PROTEIN: arginyl-tRNA synthetase [Parabacteroides sp.
           D13]
          Length = 571

 Score =  324 bits (832), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 119/606 (19%), Positives = 225/606 (37%), Gaps = 92/606 (15%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           + +      GHL T       R     P   A+ I   +  +    + F   KGF+NL +
Sbjct: 4   VTKNEKEFKGHL-TLVVFPFLRMSKKSPEQTAQEIGEYLLRNEPAVAEFNVIKGFLNLTV 62

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + S    +L+SI          +  +   V IE+ S N   P+H+GH R  ++G +L+ +
Sbjct: 63  ACSCWIDLLNSINKQPAYGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLSKI 122

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY-------L 206
           M  +G ++ +   +ND G  I    L+ + ++        +     +  G +       L
Sbjct: 123 MKANGNQIVKTNIVNDRGIHICKSMLA-WQKWGNGATPESTGKKGDHLIGDFYVLFSNKL 181

Query: 207 KHVGKELADK-------YSSELLNFPEEKWLPIVK--DYSVQAMMKII--------RDDL 249
           K     L  K        +   L     + L   +  D  V+A+ +++         +  
Sbjct: 182 KEETHALEAKGLTKEEAEAQSTLMAEAREMLRKWEAGDKEVRALWEMMNNWVYAGFNETY 241

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K + +  D    E   +          +     +G  Y                 +   +
Sbjct: 242 KMMGVDFDKIYYESQTYLEGKGK----VMEGLEKGIFYR---------------REDGSV 282

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLE 368
               T  G D ++ LL++DG+  Y   D+   K ++ +   + MIYV+G++ + + + L 
Sbjct: 283 WADLTKDGLD-EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLS 341

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            +   +  +  +  V     +    +G   KM  R G  +    ++ E            
Sbjct: 342 ILLDKLGFEFGKGLVHFSYGMVELPEG---KMKSREGTVVDADDLMAEMISTAREISQEL 398

Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                            VG  S+++ +L     + + F+  K       N   ++QY YA
Sbjct: 399 GKLDEMTPEEAENIARIVGLGSLKYFILKVDPRKNMTFNP-KESIDFNGNTGPFIQYTYA 457

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R RS+ R+A +    L         +P        E  LI  +A+Y  +++ A     P 
Sbjct: 458 RIRSVLRKAAEQGIVL------PEQLPLTFAISEKEENLIQMIADYAEIVKEAGKLYSPA 511

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +A Y+YDL   ++  +           ++  N +L   RL L   VA I+ SG++++G+
Sbjct: 512 CVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLLGI 565

Query: 580 ESPNEM 585
           E P  M
Sbjct: 566 EVPERM 571


>gi|86133816|ref|ZP_01052398.1| Arginyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820679|gb|EAQ41826.1| Arginyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 591

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 119/640 (18%), Positives = 228/640 (35%), Gaps = 104/640 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S +K     +          +  +  +  R    G + T     + R    +
Sbjct: 1   MNIQHIIESNVKKGFSTLY------NTEIPSVEFQTTRKEFEGDI-TVVVFPMLRFKKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I E +   +       + +   KGF+NL +S ++     +SI               
Sbjct: 54  PVQIGEDLGKYLVEHVSEITNYNVVKGFLNLVISDAFYLDFFNSIYKDENFGTAAAKEDE 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+ S N   P+H+GH R  ++G +++ ++  +G +V +   IND G  I    L+
Sbjct: 114 KAIMVEYSSPNTNKPLHLGHVRNNLLGFSVSEIIKAAGKKVYKTQIINDRGIHICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPG--------VYLKHVGK--------ELADKYSSELLNF 224
            + ++ +      + L      G         Y K +          E A K +  LL  
Sbjct: 174 -WQKFGEGETPTSTGLKGDKLVGNYYVKFDQEYKKEIANLIAEGKTEEEAKKEAPLLLEA 232

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E        D  V ++ K +            K + +  D    E D +       +D+
Sbjct: 233 QEMLRKWEAGDDEVVSLWKEMNGWVYDGFETTYKNMGVDFDTLYYESDTYLLG----KDV 288

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     +G  Y+                +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 289 VAKGLEKGVFYKK---------------EDGSVWCDLTDEGLD-EKIVLRSDGTAVYMTQ 332

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   M+Y +G++   + + L  +   +    A+    L   +     
Sbjct: 333 DIGTAIQRVKDFPDVGGMVYTVGNEQDYHFQVLFLILKKLGFDWAKQLHHLSYGMVDLPS 392

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    ++ E                             +G  ++++ 
Sbjct: 393 G---KMKSREGTVVDADDLMVEMTTTAKEISEELGKLDGYSDDEKNELYKTIGLGALKYF 449

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + FD  K     + N   ++QY YAR +SI R+A+       FD      I
Sbjct: 450 VLKVDPKKRILFDP-KSSVDFQGNTGPFIQYTYARIQSIIRKAE-------FDYSNSVTI 501

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
               +    E +L+  LA +P  I+ A     P  +A Y YDL   F+  + +      +
Sbjct: 502 ----DLHEKEKELLKQLALFPETIQQAASNYSPAVIANYTYDLVKEFNSFYQN------V 551

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   N+   + R+QL   VA  I    +++G++ P  M
Sbjct: 552 SILGEENQDKKIFRVQLSKKVADTIKIAFSLLGIQVPERM 591


>gi|163786141|ref|ZP_02180589.1| arginyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878001|gb|EDP72057.1| arginyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 592

 Score =  324 bits (831), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 129/639 (20%), Positives = 236/639 (36%), Gaps = 101/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L       +K  +K +       +  L+ +  +  R    G + T     + R +  +
Sbjct: 1   MDLQETLELHVKAAIKTLF------QSELESVEFQATRKEFAGDI-TVVVFPMLRVVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I E I   ++ + D+   F   KGF+N+ +  SY        +     YG   +   
Sbjct: 54  PAVIGEQIGQYLQDNVDLIKGFNVVKGFLNIEIDDSYYLDFF-QSIKGKTNYGFANLKDD 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L+
Sbjct: 113 KAVMVEYSSPNTNKPLHLGHVRNVLLGYSVAEILKASGKKVYKTQIINDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNND---SDLPEGYYPGVYLKHVGKEL------------ADKYSSELLNFP 225
            + R+ +    ++    D   G Y   + K    E+            A K +  LL   
Sbjct: 173 -YQRFGKGETPSENLKGDKLVGNYYVEFDKAYKAEIIELIAEGQSEDEAKKNAPILLEAQ 231

Query: 226 EEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           E        D  V A+ K +            K + +  D +  E + +           
Sbjct: 232 EMLRKWEAGDEDVVALWKKMNQWVYDGFEVTYKNIGVDFDTYYYESNTY----------- 280

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L  + ++ EG+      KT      D   +    T  G D ++ +L+SDG+  Y   D
Sbjct: 281 --LLGKEFIAEGL------KTGVFFKKDDGSVWCDLTEDGLD-EKIVLRSDGTAVYMTQD 331

Query: 338 LAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +     + +   D   M+Y +G++   + K L  +   +    A+    L   +     G
Sbjct: 332 IGTAIQRIKDYPDVGGMVYTVGNEQDYHFKVLFLILKKLGFDWAKNLFHLSYGMVDLPSG 391

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             +G  ++++ +
Sbjct: 392 ---KMKSREGTVVDADDLIQEMADTAEEISKELGKLEDYSEDEKKVLYKTIGLGALKYYI 448

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + FD  K     + N   ++QY YAR +SI R+A     D          + 
Sbjct: 449 LKVDPKKRILFDP-KESIDFQGNTGPFIQYTYARIQSILRKATSTSLD--------GQVY 499

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
              E    E QL+  L ++P VI+N+     P  +A + YDL   F+  + +      + 
Sbjct: 500 NSIELHEKEKQLLKQLEQFPEVIQNSAEQHSPALIANFTYDLVKDFNSFYQN------VS 553

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A+  +    R++L   V   I +   ++G+  P  M
Sbjct: 554 ILGADTEEEKSFRVELSRTVGQTIKNAFGVLGITVPERM 592


>gi|255534410|ref|YP_003094781.1| arginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340606|gb|ACU06719.1| Arginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 595

 Score =  324 bits (831), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 126/639 (19%), Positives = 230/639 (35%), Gaps = 101/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +      ++   ++ +     +  K    + +++ +    G  S      L + +   
Sbjct: 4   MNIKNIIELKIAEVIQNVFQIDDLNHKHNLSLEVQQNKSGFEGDFSV-VTFPLVKIVKKT 62

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  +   +    D    F    GF+NL +  ++          S  +    +  K 
Sbjct: 63  PDHVATELGDALFTQADFVESFNVVNGFLNLKIRNAFFINNFY----SAKQNLDQVDAKN 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G ++A ++   GY V +   IND G  I    L+
Sbjct: 119 QTVMIEYSSPNTNKPLHLGHIRNNLLGYSVAEILKADGYNVVKTQIINDRGIHICKSMLA 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-- 234
            + RY +      + L      G Y     K   KE+A+  +        +K  PI+K  
Sbjct: 179 -WQRYGEGSTPASTSLKGDKLVGNYYVEFDKTYKKEIAELVAQGKSEDEAKKEAPIIKEA 237

Query: 235 ----------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V+ + K +            K L +  D    E D +       +DI
Sbjct: 238 QQMLLSWEKNDEKVRELWKEMNTWVYAGFDQTYKRLGVDFDQVQYESDTYILG----KDI 293

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I      G +Y                 +   +       G D ++ LL+SDG+  Y   
Sbjct: 294 IQQGLLTGALYR---------------REDGSVWCDLRDEGID-EKLLLRSDGTSVYMTQ 337

Query: 337 DLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL     +++      +IY +G++   +   L  +   +    A+    L   +    +G
Sbjct: 338 DLGTAVQRFKDNDIQKLIYTVGNEQDYHFNVLFKILKKLGYSWAENLYHLSYGMVELPEG 397

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             VG  ++++ M
Sbjct: 398 ---KMKSREGTVVDADDLMQEMYETAKEKAEDLGKLENLTIEEKEKSYETVGIGALKYFM 454

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  K   +   N   ++QY YAR +S+  +A      +           
Sbjct: 455 LKVDPRKKMLFNP-KDSVEFNGNTGPFIQYTYARIQSLLAKADYQDRKV----------- 502

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            E E   SE  LI+++A +  VI  A     P  LA Y+YDL   ++  + +        
Sbjct: 503 TEYEMSDSEKDLIMNIAAFKDVISKAADTLSPALLANYIYDLVKSYNSFYQNN------P 556

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   ++ +   RL+L    A II  GL ++G+E+ + M
Sbjct: 557 ILIQEDQNMRQFRLELSDLTAKIIKKGLKMLGIETVDRM 595


>gi|633022|gb|AAA61486.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae]
          Length = 643

 Score =  324 bits (830), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 121/598 (20%), Positives = 226/598 (37%), Gaps = 96/598 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 96  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 150

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 151 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 210

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K +  +
Sbjct: 211 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INMD 266

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I   +   ++   I      LNI  D
Sbjct: 267 LAKEEINGNSKCGISGEARSFFKNLENGDENAIKIWNRFRSLSIHHYI-QTYSRLNINFD 325

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 326 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 366

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 367 KRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 426

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 427 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 479

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++       K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 480 DNPQRVADLIGVSAIIIQDTKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 538

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + D   D+             +  +   ++L+  LA+YP V+  A   QEP  +  YL+ 
Sbjct: 539 SSDFTTDM------LIHADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFK 592

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +       +  +V      + + RL +  A   ++++ ++++G+   + M
Sbjct: 593 VCHQVSSCY-------KKIWVSGKPADIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643


>gi|46124397|ref|XP_386752.1| hypothetical protein FG06576.1 [Gibberella zeae PH-1]
          Length = 635

 Score =  324 bits (830), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 123/638 (19%), Positives = 230/638 (36%), Gaps = 103/638 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           ++++  +   I      +    I+  +    G      A+   R  G  P  +AE   ++
Sbjct: 37  RSHITSLLAPITGVDPSIIYPAIQWTQTLDKGD--AILAVPALRVKGKKPGELAEEWASK 94

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-----------SGIEYGRNLIGKG 120
               P ++    +G  FI+ +     L  +L   +            +G+    +     
Sbjct: 95  FPESPLIEKPTASGP-FISFFFKADKLTNMLLPTIRKQASSYGKSPYNGLRDPSDPNSGK 153

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +EF S N   P H GH R  ++G  +ASL   +G+EVTR  Y+ D G Q   LAL+
Sbjct: 154 KRMIVEFSSPNIAKPFHAGHLRSTIIGGFIASLHESAGWEVTRLNYLGDWGKQYGLLALA 213

Query: 181 V-FWRYQQALY-------------------NNDSDLPEGYYPGVYL----KHVGKELADK 216
              W  ++AL                    +  S + E    G  +         E A K
Sbjct: 214 WEKWGDEEALKADPINHLFNLYVRINSDMSDEKSKIKEKQDAGEDVSALEADSLDEQARK 273

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           Y   + +  +E  + + + +   ++++  +     LNI++D +  E      D   ++  
Sbjct: 274 YFRRMTDGDKEA-VDLWRRFRDLSIVRY-KKTYARLNIEYDEYCGESQVPEED---MKKA 328

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            + LA +G   +         +        K L              L K DG+  Y   
Sbjct: 329 AEILAEKGLTEDANGATLIDFSKHVAGKPGKSL----------EKVILRKKDGTALYLTR 378

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D++    + E+  FD MIYV+ S    ++K+L      +  +     V  C+ +     G
Sbjct: 379 DISELLNRQEKYKFDKMIYVIASQQDLHLKQLFKTIELMGHED---IVKKCQHINF---G 432

Query: 396 MPIKMSKRAGDFITLRHVVDEV----------------------------GSDSVRFMML 427
           M + MS R G    L  ++ +V                            G  SV    +
Sbjct: 433 MVLGMSTRKGTVKFLDDILRDVAEKMHEVMRKNETKYSQVENPEAVADILGISSVMVQDM 492

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             K      FD   +    + +   Y+QYA+AR  SI R+       ++           
Sbjct: 493 SGKRINNYKFDMDVMTSF-EGDTGPYLQYAHARLCSIRRK-------VNLSDEQLATADY 544

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +     L+  L+++P V++N     EP  +  YL+ +  V    + H R       
Sbjct: 545 SLLKEKHATDLVRLLSQWPDVVQNTLKTLEPTTILTYLFKMTHVLSSSYDHLR------- 597

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +  +L   R+ L  A   ++ +G++++G+     M
Sbjct: 598 IVGSEDELQKARMGLYDAARIVLYNGMSLLGLSPVERM 635


>gi|254167275|ref|ZP_04874127.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623538|gb|EDY36101.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 550

 Score =  324 bits (830), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 139/618 (22%), Positives = 253/618 (40%), Gaps = 101/618 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + + F  R    L+ I   ++VE+                G   T     L++ +  +
Sbjct: 1   MDIISIFRDRANAMLRNIGINMEVEEA-----------KENFGDF-TLPCFSLAKEMKKN 48

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA+ I  ++K D   + +   G  ++N ++    L ++    ++SG  +      K 
Sbjct: 49  PALIAKDIAEKLK-DEYFEKIEAVGP-YVNFWIHTRKLAELTLQEILSGEIF---KFQKR 103

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E  SANPTGP+HVG  R +++GD+LA +M   GY+V  +Y++ND G Q+ TL   
Sbjct: 104 EKVIVEHTSANPTGPLHVGRTRNSIIGDSLARVMRKYGYDVEVQYFVNDVGKQVATLLWG 163

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNFPEEKWLPIV 233
           +     + +   + D    Y    Y +   +E+                    ++ L  +
Sbjct: 164 I-----KNIKIEEKDTRGDYRYVPYYQAAYREVEKNPKIEEEIQEIIWKYERGDEKLRKM 218

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +  V +++K I + LK +NI  D F+ E        +  RD+ D+L             
Sbjct: 219 AEKYVGSVLKGIEESLKNINIHFDSFVWESSL----VNRARDVADSLKDY---------L 265

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            +       D+    +        +  DR  L + DG+  Y   D+AY   K E+     
Sbjct: 266 KEDDGAFYIDLKELGV--------EGKDRLYLFRRDGTTLYPLRDIAYHLLKGEK-ARKN 316

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           + V+G DH  + + ++ +   ++E   +++ L    V+L       KMS R G  + L  
Sbjct: 317 VDVLGEDHKLHFQAIKKIVEILNEN-IEVDALFYSFVKLPEG----KMSTRQGKVVYLDD 371

Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           ++ E                         +   ++RF +L  +  + + F +        
Sbjct: 372 LLKEAEARVNEIIKNREYEKEEMEKIRRAIAVGAIRFHILNVQEEKPMTFRWEDALNFEG 431

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           E+   ++QY +AR  SI R+                    +      E++L+  +A+YP 
Sbjct: 432 ES-APFIQYTHARAASILRKTNWNGEY-----------SIDYISHPQEIKLLKLMAKYPS 479

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++ENA     PY +A Y Y LAS F+  +   R+ P L+     +      RL +V A  
Sbjct: 480 MVENAVRRLSPYIMARYAYTLASQFNQFY---RDCPVLK----ADDNTRNTRLAIVKAFK 532

Query: 568 SIINSGLNIIGVESPNEM 585
            +I   L ++G+E+P +M
Sbjct: 533 KLIKDVLELLGIEAPEKM 550


>gi|326800404|ref|YP_004318223.1| arginyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551168|gb|ADZ79553.1| Arginyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 589

 Score =  323 bits (829), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 114/620 (18%), Positives = 242/620 (39%), Gaps = 66/620 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M   A  + +    L ++    KV++K    + ++  R    G ++       ++     
Sbjct: 1   MNFIASLTVQAIKDLYQV----KVDEKS---VNLQETRKEFEGQVTI-VTFPFTKYSKKS 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P      I   +       + +   KGF+NL L+ S+  ++L + +             G
Sbjct: 53  PEQTGSEIGDYLVAHAAEIASYNVIKGFLNLSLTDSFWLQLLDTEISKPDFGEIPK--NG 110

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +E+ S N   P+H+GH R  ++G ++A+++  +GYEV +   +ND G  I    L+
Sbjct: 111 KRVMVEYSSPNTNKPLHLGHVRNNLLGFSVAAILEAAGYEVIKTNLVNDRGIHICKSMLA 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYS 237
            + +Y +      + L      G Y     KE   +     +   +  E K    +   +
Sbjct: 171 -WEKYGKGETPESAGLKGDKLVGNYYVLFDKEYKKEVDLLKAAGKSEEEAKREAPLMLQA 229

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + + +    D + + +   +     D        +    D +  +   Y       +  
Sbjct: 230 QEMLRQWEAGDDEVIGLWKRMNSWVYDGFEETYEKMGITFDKVYYESNTYLLGKDIIEEG 289

Query: 298 TTQKCDM--DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIY 354
            ++      +   +    T  G D  + +L+ DG+  Y   DL   + KY+    DN IY
Sbjct: 290 LSKGVFFRKEDNSVWIDLTADGLD-QKLVLRGDGTSVYITQDLGTAQLKYDDYRMDNSIY 348

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G++   + K L  +   + +  A+    L   +     G   KM  R G  +    ++
Sbjct: 349 VVGNEQDYHFKVLFLILKKLGKSWAEGLYHLSYGMVDLPSG---KMKSREGTVVDADDLM 405

Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            E                             +G  ++++ +L  +  + L FD  +  + 
Sbjct: 406 AEMIDTAKLRTEELGKVDDFSEEEKGGLYEMIGLGALKYFLLKVEPKKRLLFDPNESIDF 465

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + +   ++QY +AR +S+  +        ++   P +V P     + SE  LI  LA++
Sbjct: 466 -QGHTGPFIQYTHARIKSVLTKG-------NYGTTPFSVQPMS--LEASERDLIKELAKF 515

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             ++++A     P  +A Y+Y++A +++  +        +  ++A  + L   RL L  A
Sbjct: 516 TDIVKSAAADYSPAVIANYVYEVAKLYNKFYH------EVSILKAEEKSLKEFRLNLSAA 569

Query: 566 VASIINSGLNIIGVESPNEM 585
            A++I   + ++G++ P  M
Sbjct: 570 TATVIQKAMRLLGIQVPERM 589


>gi|256269431|gb|EEU04726.1| Msr1p [Saccharomyces cerevisiae JAY291]
          Length = 643

 Score =  323 bits (829), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 122/598 (20%), Positives = 228/598 (38%), Gaps = 96/598 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 96  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 150

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 151 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 210

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K + K+
Sbjct: 211 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INKD 266

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I   +   ++   I      LNI  D
Sbjct: 267 LAKEEINGNSKCGISGEARGFFKNLENGDENAIKIWNRFRSLSIHHYI-QTYSRLNINFD 325

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 326 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 366

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 367 KRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 426

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 427 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 479

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++    +  K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 480 DNPQRVADLIGVSAIIIQDMKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 538

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + D   D+             +  +   ++L+  LA+YP V+  A   QEP  +  YL+ 
Sbjct: 539 SSDFTTDM------LIHADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFK 592

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +       +  +V      + + RL +  A   ++++ ++++G+   + M
Sbjct: 593 VCHQVSSCY-------KKIWVSGKPADIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643


>gi|291533468|emb|CBL06581.1| Arginyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 271

 Score =  323 bits (828), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 113/281 (40%), Positives = 159/281 (56%), Gaps = 13/281 (4%)

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L  +ST  GDD DR +++ +G  TY AAD+AY   K+ER FD +I + G+DH GYV
Sbjct: 4   QDGALWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHDNKFERKFDKLINIWGADHHGYV 63

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            R++A  AA+      + VLL ++V LYRDG  +KMSKR G  +TL  +++EVG+D+ RF
Sbjct: 64  CRVKAAMAALGYNADDLEVLLLQMVSLYRDGELVKMSKRTGQSVTLSELIEEVGADAARF 123

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + R     LDFD    K QS ENPV+YVQYAYAR  SIFRQ K+   +   +      
Sbjct: 124 FFIMRSLDSQLDFDLNLAKSQSNENPVYYVQYAYARICSIFRQMKEAGIETTENP----- 178

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  D +E+ LI  L  YP  I  A   + P+++A Y++DLAS+FH  ++  R    
Sbjct: 179 -QLSLLTDEAEIALIKKLLSYPDEIATAAKNKAPHRIATYVHDLASMFHSFYNKCR---- 233

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   + KL   RL L  AV  ++   L I+GV +P +M
Sbjct: 234 ---ILGVDAKLAGARLALCLAVKYVLAHALAILGVNAPEKM 271


>gi|329888286|ref|ZP_08266884.1| arginyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328846842|gb|EGF96404.1| arginyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 599

 Score =  323 bits (828), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 117/626 (18%), Positives = 223/626 (35%), Gaps = 71/626 (11%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D  + L   +        V+K +      +RP         +N A+  ++ L  +P  
Sbjct: 1   MTDLKTSLSEAVGSAFAAEGVDKALARVTASDRP---DLADFQSNGALAAAKALKANPRE 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +  R+  DP + SV +AG GFIN+ LS + L +  + +       G + + +  KV
Sbjct: 58  LAAKVAERLAADPRLSSVEVAGPGFINMKLSNAALAQRAAEVAADKELAGASRV-EPRKV 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--- 180
            I++   N   PMHVGH R A++G++L  L    G +VT + +  D G Q+  L  +   
Sbjct: 117 VIDYGGPNVAKPMHVGHLRSAIIGESLKRLFRLRGDDVTGDAHFGDWGFQMGLLITACGD 176

Query: 181 -----VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL----- 230
                 F       +  ++ +       +Y    GK   D    +       +       
Sbjct: 177 EGLADAFMVEGDGPFPAETPVTLADLDRLYPLAAGKAKEDPAFRDRARKATAELQGGRPG 236

Query: 231 -PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              +  + V    + ++ +   L++  D++  E D        + ++I +L  +G + E 
Sbjct: 237 YRALWSHFVAVSREALKREYDDLSVDFDLWNGESDA----DPLMDEMIADLKAKGLLVED 292

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348
                           +K                ++ S+GS  Y   DLA    + +  G
Sbjct: 293 DGAQVIHVARDGETRKKKLADGSVIEAPSPPPLLVISSEGSAMYGTTDLATILDRKKSIG 352

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D ++YV+    + + +++   A        +    L        DG P K   RAG  +
Sbjct: 353 PDLILYVVDERQAEHFEQVFRAAYLAGYAPEKSLEHLGFGTMNGADGKPFK--TRAGGVL 410

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            LR ++D+                             V   +++F  L    +    FD 
Sbjct: 411 KLRDLIDQATEKARERLHEAKLGDDLPAEEFEDIAHKVAVAALKFSDLSNNRTTSYVFDL 470

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     +     Y+ Y   R +S+ R+A +              +      + +E  L 
Sbjct: 471 DR-FMSFEGKTGPYLLYQAVRVKSLLRKAAEQGV----------ALAPIVIEEAAERDLA 519

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L  +     +A   + P  +A + Y LA  F   ++          + A +      R
Sbjct: 520 LTLDAFDAATADAYDKRSPNLIAEHAYRLAQSFSKFYAAC------PILVAPDEATKGSR 573

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A    + + L ++G+E+P  M
Sbjct: 574 LALAAATLHQLETALRLLGIETPERM 599


>gi|257053080|ref|YP_003130913.1| arginyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691843|gb|ACV12180.1| arginyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 583

 Score =  323 bits (828), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 155/630 (24%), Positives = 258/630 (40%), Gaps = 94/630 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F   ++  L E    + +     D + IERP +     L+++AA  L+   G  P 
Sbjct: 1   MFLTFRDEVEVALSEALSALDLPS---DDLGIERPPEDVPAVLASSAAYRLADVAGAPPP 57

Query: 63  TIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IA  I + I       V SV   G  ++N   S  Y    L +   +       L   G
Sbjct: 58  KIAADIASEIDPAEYDYVGSVQTQGP-YVNFLPSDRYFEGTLEAAQAAD---YGTLEDTG 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E  SANPTGP+HVG  R  +VGD LA ++ ++G +V R YY+NDAG QI     +
Sbjct: 114 DSVVVEHTSANPTGPVHVGRARNPIVGDALARVLEYAGNDVERHYYVNDAGRQIAVFTWA 173

Query: 181 VFWRYQQALYNNDSDLPE----GYYPG--VYLKHVGKELADKYSSEL------LNFPEEK 228
                +  L   + + PE     YY     YL+   +   +    E+      L   +E+
Sbjct: 174 YETFDESDLPEPERESPEYEMVRYYRAANDYLEEASESEQEAAEDEIGAILQGLEEGDEE 233

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
               V +  V  ++  +R+ L  L  + D F+ E  F R       D++D L        
Sbjct: 234 TYERVSEV-VDTVLGGMRETLGRLPAEFDEFVKETRFMR--DGSTDDLVDRLKEL----- 285

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                         + D  QL     +   + +   L+SDG+  Y   DLA+ + K++  
Sbjct: 286 ---------DAAVFEEDAWQL----DLPDFEKNLVFLRSDGTSLYTTRDLAHHEWKFD-N 331

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           FD  + V+G DH     +L +    +     ++  +    V L   G    MS R G  +
Sbjct: 332 FDRAVTVLGEDHKLQADQLSSTLDLLGHDTDRLQQVFYSWVNLPEGG----MSTREGTGV 387

Query: 409 TLRHVVDE---------------------------------VGSDSVRFMMLWRKNSELL 435
            L  ++DE                                 VG  +VR+ ++ ++ ++ +
Sbjct: 388 DLDDLLDEAIDRAREEVEDRLEDRQRSDDLDGADVERIAHQVGIGAVRYDVVAKQPTKGI 447

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F++ +  +   ++   YVQY +ARC  I  + KD   ++         +   +    +E
Sbjct: 448 TFEWDRALDFEAQS-APYVQYVHARCCGIIDEGKDAGYEV------PETVSAATLTTEAE 500

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             L+  +A +P VIE A     P+ +A Y  D+A  F+  +   RE P    V   + + 
Sbjct: 501 RDLLRAIARFPGVIEQAAEELRPHVVATYTRDIAEAFNTFY---RECP----VLDADPET 553

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL LV A  + + + L+ +GVE+PN M
Sbjct: 554 RAARLALVAAARTTVANALDALGVEAPNSM 583


>gi|167648344|ref|YP_001686007.1| arginyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083526|sp|B0T019|SYR_CAUSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167350774|gb|ABZ73509.1| arginyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 613

 Score =  322 bits (826), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 116/638 (18%), Positives = 219/638 (34%), Gaps = 87/638 (13%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           S LK  L E          +      +             N A+  ++    +P  IA  
Sbjct: 2   SDLKRSLSEAAAAAFQAAGLSPDFGRVTASDRPDLADFQCNGALAAAKSAKRNPREIAVQ 61

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           +V  +K DP + SV IAG GFIN+ +S   L    + I       G   +    +V +++
Sbjct: 62  VVDVLKADPRLASVEIAGVGFINMRVSTDALSIRANEIAAD-PRAGAEPLAHPRRVLVDY 120

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW---- 183
              N   PMHVGH R +++G+++  L  F G +V  + +  D G Q+  L  ++      
Sbjct: 121 AGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHFGDWGFQMGLLISAIMEEDAF 180

Query: 184 ---------RYQQALYNNDSDL-------------PEGYYPGVYLKHVGKELADKYSSEL 221
                       +     D D               +  YP    +        + + + 
Sbjct: 181 IRALLERLVEAPREFSKADEDKVMSEFAQRVTLDDLDRLYPAASARQKEDPEFKEKARKA 240

Query: 222 LNFPEEKWL--PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               +       ++  + V      +  +  AL +  D++  E D        I  ++  
Sbjct: 241 TAELQNGRFGYRLLWRHFVNISRVALEREFHALGVDFDLWKGESDVQ----DLIAPMVRQ 296

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADL 338
           L  +G + +        +  +  +  +K+L   S +  +  D  L + S+GS  Y   DL
Sbjct: 297 LEVKGLLVDDQ-GARIVRVARPGETKKKKLPDGSVVEVESPDPLLVVSSEGSAMYGTTDL 355

Query: 339 AYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           A    + +  FD   ++Y +    + + +++   A      +      +        DG 
Sbjct: 356 ATILDRRK-SFDPHLILYCVDQRQADHFEQVFRAAYLAGYAEPGSLEHIGFGTMNGSDGK 414

Query: 397 PIKMSKRAGDFITLRHVVD-----------------------------EVGSDSVRFMML 427
           P K   RAG  + L  +++                             +VG  +++F  L
Sbjct: 415 PFK--TRAGGVLKLHDLIEMAREKARERLREAGLGAELSQEAFEETAHKVGIAALKFADL 472

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                    FD  +     +     Y+ Y   R +SI R+A +           + V   
Sbjct: 473 QNFRGTSYVFDLDRFTSF-EGKTGPYLLYQSVRIKSILRKAAE----------QKVVSGA 521

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               + +E  L + L  +   +  A   + P  +A + Y LA  F   ++          
Sbjct: 522 IIVGEPAERDLTLLLDAFEGALSEAYDKKAPNFIAEHAYKLAQTFSKFYAAC------PI 575

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A+N      RL L       +   L+++G+E+P  M
Sbjct: 576 LSADNDATRASRLALAETTLKQLELALDLLGIEAPERM 613


>gi|325287081|ref|YP_004262871.1| Arginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322535|gb|ADY30000.1| Arginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 590

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 120/640 (18%), Positives = 236/640 (36%), Gaps = 105/640 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    + ++K  +      + + K  L  +  +  R    G + T     + R +  +
Sbjct: 1   MNIQEVLTQKVKEAV------LAIYKIELPTVEFQPTRKDFEGDI-TVVVFPILRFVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I E I   +K +      F   KGF+N+ +S ++     + I  +            
Sbjct: 54  PAQIGEQIGVYLKDNVAEVENFNVVKGFLNIVISDAFYVNFFNGIKNTENYGFVTESEDA 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L+
Sbjct: 114 --VMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKASGKKVYKTQIINDRGIHICKSMLA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIV--- 233
            +  +        + +      G Y     K    ++A+  +        EK  PI+   
Sbjct: 172 -WKLFGNGETPESTGIKGDKLVGNYYVRFDKEYKAQIAELVAKGTDAKEAEKQAPILLEA 230

Query: 234 ---------KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D  V A+ K +            K L +  D +  E D +       +DI
Sbjct: 231 QEMLRKWEAGDKEVVALWKTMNQWVYNGFEVTYKNLGVDFDTYYYESDTYLLG----KDI 286

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +D    +G  Y                 +   +    +  G D ++ +L++DG+  Y   
Sbjct: 287 VDEGLEKGVFYRK---------------EDGSVWIDLSDEGLD-EKIVLRADGTAVYMTQ 330

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   M+Y +G++   +   L  +   +    A+    L   +     
Sbjct: 331 DIGTAIQRTKDYPDVNGMVYTVGNEQDYHFNVLFLILKKLGFSWAEQLYHLSYGMVDLPS 390

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    ++ +                             +G  ++++ 
Sbjct: 391 G---KMKSREGTVVDADDLMKDMTATAASISEELGKLDGYTDKEKEELYRIIGLGALKYY 447

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + F+  +   + + N   ++QY YAR +SI R++       DFD       
Sbjct: 448 ILKVDPKKRILFNPEE-SVEFQGNTGPFIQYTYARIQSILRKS-------DFDYTASVTT 499

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              ++    E +L+  +  +P V++NA     P  +A Y YDL   F+  + +      +
Sbjct: 500 ---NDLHEKEKELLKQIQVFPSVVQNAAQNYSPALVANYTYDLVKEFNSFYQN------V 550

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   + +  + R+QL   V  +I S   ++G+E PN M
Sbjct: 551 PILPEEDLQKKIFRVQLSKKVGEVIKSAFTLLGIEVPNRM 590


>gi|253577326|ref|ZP_04854644.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843330|gb|EES71360.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 624

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 130/645 (20%), Positives = 245/645 (37%), Gaps = 95/645 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  ++++  ++    + L  IVIERP    HG  STN AM L++ L   PL IA 
Sbjct: 9   MKKYLELSVRQVLSRLGHSTEELPDIVIERPARAEHGDYSTNIAMQLAKTLRQPPLHIAA 68

Query: 67  LIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +   ++    ++     +  A  GF+N  L         +       +  R +     K
Sbjct: 69  QLKNELEQTGRMEGLFHQIETAPPGFLNFRLD-------WNEWARKDFQLPRAVR---EK 118

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IE  S NP    H+GH R A +GD+LA L+  +GY++    YI+D G Q+    + + 
Sbjct: 119 VVIEHTSINPNKSAHIGHLRNACIGDSLARLLKRAGYQIEVHNYIDDLGNQLADTVVGLL 178

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQA 240
               QA +    D     Y  V  ++  +    +  +++L   E  +  L  V   + + 
Sbjct: 179 NVDHQAAHVRFGDFCWDIYSRVNKEYDDQPSLLEQRTKVLQALEAGDGNLAWVGLLTAER 238

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +++   +++KA  I +D+ + E +  R       D    L +Q  ++         K   
Sbjct: 239 IVREHLEEMKAFGIDYDLLVWESNIVRQGF---WDTAFRLLQQTALFH---KETSGKLEG 292

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER------------- 347
              + +       +      D+ L++S+G  TY A D+AY   K+               
Sbjct: 293 CWVLKQPAAEDVESEAEHQADKVLVRSNGILTYTAKDIAYHLWKFGLLGNDFRYKPFADG 352

Query: 348 --------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRL 391
                           D ++ V+    +     ++    A+       ++  +   +V L
Sbjct: 353 LWTTSAEGVAADYGKADLVVNVIDHRQAYPQAMVKQALEALGFTAQAEKLRHVGYGVVSL 412

Query: 392 Y------------RDGMPIKMSKRAGDFITLRHVVDE-------------------VGSD 420
                               MS R G  I +  ++D                    + + 
Sbjct: 413 SPGAARELGLDTSDGKASYAMSGRQGIGIKVSDLLDLMEAQIEAKRSDSEGLSSRLIAAA 472

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++R+ +L       + FD  +  E +  N   Y+ YA+AR  SI  +A+        +  
Sbjct: 473 AIRYYLLRFALPTEVVFDIQQATE-TTGNTGVYLMYAHARAASILAKAQADGLPR-MESL 530

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
           P ++ PQE     +E  L+  +A +P  +  A     P  +  + Y+LA++F+  ++   
Sbjct: 531 PEDIAPQER----AEHALLRQIAAWPDTLSTACEELSPTPICHFAYELATLFNHFYTAC- 585

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  ++A   +    RL L       I   L++IG+ +P+ M
Sbjct: 586 -----PILKAE-PERQPYRLWLTAKFKETIAEALDVIGLPAPDRM 624


>gi|332291119|ref|YP_004429728.1| arginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169205|gb|AEE18460.1| arginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 592

 Score =  321 bits (824), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 122/640 (19%), Positives = 236/640 (36%), Gaps = 103/640 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L +   + +K  + ++          L  +  +  R    G + T     + R +  +
Sbjct: 1   MSLQSTIETHVKTAVSQLFNA------TLPEVEFQATRKEFEGDI-TVVVFPMLRVVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I   I   +       + F   KGF+NL ++ S+     + I  +  E        G
Sbjct: 54  PVQIGTQIGEYLVEHVAEITAFNVVKGFLNLVIADSFYMSSFADIQAA--ENFGRTPESG 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G +++ ++  +G +V +   IND G  I    L+
Sbjct: 112 KAVMVEYSSPNTNKPLHLGHVRNVLLGYSVSEIIKAAGSKVYKTQIINDRGIHICKSMLA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPG--------VYLKHVGK--------ELADKYSSELLNF 224
            + R+        + L      G         Y K +          E A K +  +L  
Sbjct: 172 -WERFGNGETPESTGLKGDKLVGNYYVKFDQEYKKQIADLVAAGKTEEEAKKEAPLILEA 230

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E        D  V A+ K + +          K + +  D +  E + +       +D 
Sbjct: 231 QEMLRKWEAGDAEVVALWKKMNEWVYDGFEVTYKNIGVDFDSYYYESNTYLLG----KDN 286

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           I+    +G   +                    +    T  G D  + +L++DG+  Y   
Sbjct: 287 IEEGLAKGVFEQDP---------------DGSVWCDLTEDGLDR-KIVLRADGTAVYMTQ 330

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   MIY +G++   + + L  +   +    A+    L   +     
Sbjct: 331 DIGTAIQRVKDHPDVGGMIYTVGNEQDYHFQVLFLILKKLGYDWAENLFHLSYGMVDLPS 390

Query: 395 GMPIKMSKRAGDFITLRHVVDEV-----------------------------GSDSVRFM 425
           G   KM  R G  +    +++EV                             G  ++++ 
Sbjct: 391 G---KMKSREGTVVDADDLINEVAQTAGEISEELGKLEGYSDEEKKALYKTIGLGALKYY 447

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + FD  K     + N   ++QY Y R ++I R+AK++   ++        I
Sbjct: 448 ILKVDPKKRILFDP-KESVDFQGNTGPFIQYTYVRIQAILRKAKEMNVPVE--------I 498

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            QE      E +L+  + EYP  I+ A   + P  +A Y YDL   ++  +       ++
Sbjct: 499 AQERTLHPKEKELLKIIQEYPATIQLAAAQKSPAIIANYTYDLVKEYNSFFQ------QV 552

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +  +N +    R+ L   V  +I S  +++G+E P  M
Sbjct: 553 QILGTDNIEDQSFRVALSKEVGLVIESAFSLLGIEVPERM 592


>gi|259146846|emb|CAY80102.1| Msr1p [Saccharomyces cerevisiae EC1118]
          Length = 617

 Score =  321 bits (824), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 122/598 (20%), Positives = 228/598 (38%), Gaps = 96/598 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 70  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 124

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 125 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 184

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K +  +
Sbjct: 185 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INMD 240

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I   +   ++   I      LNI  D
Sbjct: 241 LAKEEINGNSKCGISGEARSFFKNLENGDENAIKIWNRFRSLSIHHYI-QTYSRLNINFD 299

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 300 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 340

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 341 KRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 400

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 401 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 453

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++    +  K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 454 DNPQRVADLIGVSAIIIQDMKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 512

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + D   D+             +  +   ++L+  LA+YP V+  A   QEP  +  YL+ 
Sbjct: 513 SSDFTTDM------LIRADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFK 566

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       +       +  +V      + + RL +  A   ++++ ++++G+ S + M
Sbjct: 567 VCHQVSSCY-------KKIWVSGKPADIAIPRLAVYSASRQVLHNAMSLLGLVSVDRM 617


>gi|295687776|ref|YP_003591469.1| arginyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429679|gb|ADG08851.1| arginyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 600

 Score =  321 bits (824), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 122/638 (19%), Positives = 214/638 (33%), Gaps = 104/638 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           LK  L E          +      +             N A+  ++    +P  IA  +V
Sbjct: 4   LKRSLSEAASAAFQAAGLPPEFGRVTASDRPDLADFQCNGALAAAKSAKRNPREIATQVV 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
             +K DP + SV IAG GFINL +S   L      I       G  ++    +V I++  
Sbjct: 64  EILKADPRLSSVEIAGAGFINLRVSDEALSVRAREIAAD-ARTGAQVLDAPRRVLIDYAG 122

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--Q 187
            N   PMHVGH R +++G+++  L  F G EV  + +  D G Q+  L  ++       +
Sbjct: 123 PNVAKPMHVGHLRASIIGESIKRLYRFRGDEVLGDAHFGDWGFQMGLLISAILDEDAAIR 182

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGK--------ELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           AL     D   G  P        +        +L   Y +  L   E+         +  
Sbjct: 183 ALVEKLPDTAAGADPADEAALNAELDTRIALADLDRIYPAASLRQKEDAAFKERARKATA 242

Query: 240 AMMKI------------------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            +                     +  +  AL +  D++  E D +      I  ++  L 
Sbjct: 243 ELQNGRYGYRVLWSHFVKVSRVALEREFHALGVDFDLWKGESDVN----DLIEPMVGQLE 298

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
            +G + E                D+   + R     D  D P   ++ S+GS  Y   DL
Sbjct: 299 AKGLLVE----------------DQGARIVRVAREDDKQDVPPLLVVSSEGSAMYGTTDL 342

Query: 339 AYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           A    + +  FD   ++Y +    + + + +   A             +        DG 
Sbjct: 343 ATILDRRQ-SFDPHLILYCVDQRQALHFETVFRAAYLAGYADEGSLEHIGFGTMNGTDGK 401

Query: 397 PIKMSKRAGDFITLRHVVD-----------------------------EVGSDSVRFMML 427
           P K   RAG  + L  +++                             +VG  +++F  L
Sbjct: 402 PFK--TRAGGVLKLHDLIEMAREKARERLREAGLGAELSEEQFEDTAHKVGVAALKFADL 459

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                    FD  +     +     Y+ Y   R +S+ R+A +        +        
Sbjct: 460 QNFRGTSYVFDLDRFTSF-EGKTGPYLLYQSVRIKSVLRKAAEAGATAGEIVI------- 511

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               + +E  L + L  +   ++ A   + P  +A + Y LA  F   ++          
Sbjct: 512 ---GEQAERDLAMLLDAFEGALQEAYDKKAPNFVAEHAYRLAQSFSKFYAAC------PI 562

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A+   L   RL L       +   L+++GVE+P  M
Sbjct: 563 MSADTDALRASRLALAETTLRQLELALDLLGVEAPERM 600


>gi|331220739|ref|XP_003323045.1| arginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309302035|gb|EFP78626.1| arginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 626

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 130/630 (20%), Positives = 231/630 (36%), Gaps = 82/630 (13%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGL 59
            +   F + +   + EI      +   L+RI   +E  +    G L    A+   R  G 
Sbjct: 33  NVLDAFRTAVAVQVAEILNLPHSDPADLERIWAGVESGKKEG-GDL--TIAVPRFRIKGS 89

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-------GIEY 112
           DP  +A+ I    + +  + S    G  F+   +    L + +   V         G  Y
Sbjct: 90  DPKQLAKKIQDEFQTNEWIQSANAEGA-FVKFQMDSKTLCRTVLHQVNELTHLSNTGGGY 148

Query: 113 GRNL------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
           G N        GK  K+ +EF S N     H GH R  ++G  L +L   +G++V R  Y
Sbjct: 149 GTNSSGIDPSTGKKKKLVLEFSSPNIAKKFHAGHLRSTIIGAFLGNLHEANGWDVKRINY 208

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-------HVGKELADKYSS 219
           + D G Q   LA+  F RY        S+ P  +   VY K          + L  K   
Sbjct: 209 LGDWGRQFGVLAVG-FERY--GSEQELSEQPIQHLLDVYTKINKDMEGEEKEALEQKARD 265

Query: 220 --ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +L+   +   + + K +     +K    D   LNI+ D++  E          +   +
Sbjct: 266 FFKLMEEGDSTAVALWKRFR-DYSIKQYEQDYARLNIKFDVYSGESQV---THESMDVAL 321

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L  +G   E        K T  CD+D  +L              + KSDG+  Y   D
Sbjct: 322 KVLREKGIAIE-------DKGTLICDLDAYKL----------GRTVIRKSDGTNLYITRD 364

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ---------------- 380
           +     +Y++  FD MIYV+ S    ++ +   V   +    A+                
Sbjct: 365 IGEAIQRYDKYQFDKMIYVVASQQDLHLAQFFKVLDLMGFPWAKKLQHINFGMVAGMSTR 424

Query: 381 --INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELL 435
              +V L +++   R+ M  +M      +  +       DEVG   ++   +  K     
Sbjct: 425 KGTSVHLEDMMNEARNTMHEQMKTNVDKYNEIPDPLRTADEVGISGIKIQDMAGKRINGY 484

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           +F + +V    + +   Y+QYA+ R  S+ R+A   +   +       +       +   
Sbjct: 485 EFKWDRVLSF-EGDTGPYLQYAHVRLCSVERKAAPTYVLPEPTKIAAEIETSILSEEAKA 543

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L+V L+ YP  ++ A    EP  +  Y + L       W           V+  ++  
Sbjct: 544 RELVVLLSLYPDAVKTAFSKLEPSSIVTYCWRLTHAVSSAWE-------TLIVKGQDQPT 596

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + RL L  +   ++ S + ++ +E  + M
Sbjct: 597 ALARLWLFRSCKDVLASAMKLLTLEPLDRM 626


>gi|291294729|ref|YP_003506127.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290469688|gb|ADD27107.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 613

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 134/631 (21%), Positives = 241/631 (38%), Gaps = 101/631 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  S+LK  + +    + +++   + +V E P D   G   T  AM L+R L   P  IA
Sbjct: 7   EIKSQLKAAIAQALEALGLQE-WPEIVVQETPPDKE-GDYGTPVAMSLARTLRKAPPQIA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             ++  I++   V   F+ G G++N  L P++L       V S             KV +
Sbjct: 65  ADLLQNIQLPAWVRRTFVLG-GYLNFELDPAFL-------VKSATLPVAPFPKVAGKVLL 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  S NP   +HVGH R   +GD+LA ++ F G +V    YI+D G Q    A S++   
Sbjct: 117 EHTSVNPNKELHVGHLRNICLGDSLARILRFVGRDVEVMNYIDDTGRQ---AAESLYALQ 173

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAM 241
              L    +     ++ G     + + + D      +    +  L  ++      +V  +
Sbjct: 174 YFGLKEAPAQTKYDHWVGEAYVRLHQAMEDPEQKARIEQGVQSTLHRLEAGELRDAVDKI 233

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++     +  L  +++  + E D  R     +   +  L    YV      P + K    
Sbjct: 234 LRAQLQTMYRLGAEYNALVWESDIVR--EGLLGKAMKILEGSPYV----SRPTEGKYAGA 287

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-------------- 347
             MD    +       +D    L++S+G+ TY A D+A    K                 
Sbjct: 288 LVMDTSAFI----PGLEDPYLVLIRSNGTSTYTAKDIALQFWKMGLLEGLRFVTYDTQPS 343

Query: 348 -----------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCEL 388
                            G    I V+ +  S  ++ ++A            +   L  E 
Sbjct: 344 GAPLYSTHPEGVPLPFGGASETINVVDARQSHALRVVQASLEVEGRPDLAEKCFHLAYET 403

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVR 423
           V L       +MS R G  +++  V+DE                         +G  +VR
Sbjct: 404 VLL----EGRQMSGRKGIVVSVDEVMDEAVKRVRAVIAEKNPDHPSPAEAAEQIGVGAVR 459

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F ML  +  + +DF + +     + +   Y+QYAYAR  SI R+A++     +       
Sbjct: 460 FAMLKTEAKKQIDFRYDQALSF-EGDTGPYIQYAYARAGSILRKAEEQGVIQE------- 511

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN- 542
             P  ++    E+ L   L  +P  +++A   + P+ +A YL +LA+ +   ++    + 
Sbjct: 512 -APDFTQATPYEVALAKTLLRFPEAVQDAARNKAPHIVAQYLLELAAAWSSFYNAKTPDG 570

Query: 543 -PRLRFVQANNRKLTMMRLQLVHAVASIINS 572
            P    + A   +L  +RL+LV A+   +  
Sbjct: 571 RPATPVLSA-PPELRGVRLELVKALRQTLKQ 600


>gi|228965172|ref|ZP_04126266.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794406|gb|EEM41918.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 481

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 117/528 (22%), Positives = 201/528 (38%), Gaps = 80/528 (15%)

Query: 91  LYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           ++ +   +   +L +++    E+G+N  G    V I++ S N   P  +GH R  ++G++
Sbjct: 1   MFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVVIDYSSPNIAKPFSMGHLRSTMIGNS 60

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +    GYEV    YI D G Q   L  +         + N++ + E     ++  +V
Sbjct: 61  LKHIAEKCGYEVVGINYIGDWGTQFGKLITAY------KKWGNEAVVKEDPIRELFKLYV 114

Query: 210 GKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                 K   E L      W   ++   + +V+       + LK  +  +++   E    
Sbjct: 115 QFHEEVK-DDEELEEEGRAWFKKLEEGDEEAVELWNWFRHESLKEFSRIYELLGVEFTNF 173

Query: 267 RGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +G+    + + D I  L   G + E                    L+      G      
Sbjct: 174 QGEAFYNNLMEDFIGILEEHGLLEES----------------EGALVVNLEEEGMP-PCL 216

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           + KSDG+  Y   DL     +    GFD  +YV+G + S +  +   V   +        
Sbjct: 217 IRKSDGATIYATRDLTAALYRQNTYGFDKALYVVGPEQSLHFNQFFTVLKKLGYTWVD-G 275

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------V 417
           +       + +DG   KMS R G  I L  V++E                         V
Sbjct: 276 MEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLKQKEEVAKQV 333

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +V F  L  +    ++F    + +   E    YVQY +AR  SI R+    F    F
Sbjct: 334 GVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYVQYTHARACSILRKESVEFETCTF 392

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L            D     ++  L ++P+VIE A    EP  ++ Y+ D+A  F+ ++ 
Sbjct: 393 ALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYYG 441

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + R             +    RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 442 NVRIL--------EESEEKDSRLALVYAVTVVLKEGLRLLGVEAPEEM 481


>gi|257387346|ref|YP_003177119.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169653|gb|ACV47412.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 591

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 153/634 (24%), Positives = 260/634 (41%), Gaps = 94/634 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F    S ++  L+     + +  + L    IE P +     L+++ A  L+  +G  P 
Sbjct: 1   MFRQTRSEVETALEAALEALDLPSEDLG---IEEPPEDVAAVLASSTAFRLAGEVGAPPP 57

Query: 63  TIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  I A I       VDSV   G  ++N   S +Y  + L     +  E    L  + 
Sbjct: 58  AVAADIAAAIDPSDLTYVDSVEQRGP-YVNFLPSDAYFSETL---AAAQAEDYGQLPDRD 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T V +E  SANPTGP+HVG  R  ++GD LA ++ ++GY+V R YY+NDAG Q+     +
Sbjct: 114 TSVVVEHTSANPTGPVHVGRARNPIIGDALARVLDYAGYDVDRHYYVNDAGRQMAVFTWA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--- 237
                +  L   + D PE  Y  V     G    ++  ++ +   E +   I++      
Sbjct: 174 YETFDEDDLPEPERDSPE--YEMVRYYRKGNSFLEEADADRVEDAESEIQAILQGLEAGD 231

Query: 238 ----------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                     V  ++  + + L  L  + D F+ E  F R D     D++D L       
Sbjct: 232 EDAYERVGEVVDTVLGGMSETLGRLPAEFDEFVKETRFMRND--ATEDLVDRL------- 282

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                  K+      + D  QL     + G + +   L+SDG+  Y   DLA+ + K++ 
Sbjct: 283 -------KALDQAVYEEDAWQL----DLPGFEKNLVFLRSDGTSLYTTRDLAHHEWKFDT 331

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +D  + V+G DH     +L+     +     Q++ +    V L   G    MS R G  
Sbjct: 332 -YDRAVTVLGEDHKLQADQLDTTLDLLGHDTDQLSQVFYSWVNLPEGG----MSTREGTG 386

Query: 408 ITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSEL 434
           I L  ++DE                                 VG  +VR+ ++ ++ ++ 
Sbjct: 387 IDLDDLLDEAIDRAREEVESRIDTRSRDDDLDETDVERIAHQVGIGAVRYDIVSKQPTKG 446

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSI---FRQAKDIFPDLDFDLFPRNVIPQESEF 491
           + F++ +  +   ++   YVQY +ARC  I      A +   + + +    ++       
Sbjct: 447 ITFEWDRALDFEAQS-APYVQYVHARCCGIRSEAEHAVEEGKEREPESTAADLDAAPLAT 505

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           D +E  L+  +A +P VIE A     P+ +A Y   LA  F+  +   RE P    V   
Sbjct: 506 D-AERDLLREIARFPAVIEQAADEHRPHVVATYTRTLAEQFNTFY---RECP----VLDA 557

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      RL LV A    I + L+ IG+ +P  M
Sbjct: 558 DPDTKRARLALVDAARHAIANALDAIGIAAPRSM 591


>gi|149371672|ref|ZP_01891088.1| arginyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355299|gb|EDM43859.1| arginyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 593

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 115/640 (17%), Positives = 230/640 (35%), Gaps = 102/640 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L    +S++K  +  I          L+ +  +  R    G ++     +L R +  +
Sbjct: 1   MSLQQILTSQVKAAITNIYSAN------LETVEFQATRKEFEGDITIVVFPML-RVVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I E I   +  +      F   KGF+N+ LS ++      ++        +      
Sbjct: 54  PVQIGEAIGQYLVDNVAEVVRFNVVKGFLNIVLSDAHFLDFFRNVPAWNNFGVK--PQGE 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A++   +G +V +   IND G  I    L+
Sbjct: 112 EAVMVEYASPNTNKPLHLGHVRNVLLGYSVANITKAAGKKVYKTQIINDRGIHICKSMLA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + R+        + L      G Y     +E   +                       +
Sbjct: 172 -WERFGNGETPASTGLKGDKLVGNYYVKFDQEYKKEIAALEATGKTTEEAKAEAPLLLEA 230

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             +L   E     +V  +        +      KA+ +  D +  E + +          
Sbjct: 231 QAMLIKWEAGDKDVVDLWKKMNGWVYEGFEATYKAIGVDFDSYYYESNTY---------- 280

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  + ++ EG+      K       +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 281 ---LLGKEFIAEGLASGVFFKK------EDGSVWCDLTEEGLD-EKIVLRSDGTAVYMTQ 330

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   MIY +G++   + + L  +   +    A+    L   +     
Sbjct: 331 DIGTAIQRVKDHPDVNGMIYTVGNEQDYHFQVLFLILKKLGFDWAKNLYHLSYGMVDLPS 390

Query: 395 GMPIKMSKRAGDFITLRHVV-----------------------------DEVGSDSVRFM 425
           G   KM  R G  +    ++                               +G  ++++ 
Sbjct: 391 G---KMKSREGTVVDADDLIADMSSTARKISEELGKIDDFTEEEKTALYHTIGLGALKYY 447

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + + F+  +  +  + N   ++QY +AR +SI R+  +       D+    V 
Sbjct: 448 ILKVDPKKRILFNPEESVDF-QGNTGPFIQYTFARIQSIIRKGNN-------DVTLSAVE 499

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
            Q+   +  E +++  L ++P  IE A     P  +A Y YDL   F+  + +      +
Sbjct: 500 IQDYSLEPKEKEVLKSLQQFPSTIELAAANYSPAVIANYTYDLVKEFNSFYQN------V 553

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               A N      R+ L  AV  +I +   ++G++ P  M
Sbjct: 554 PIFSAENETEVKFRVALCAAVGDVIKTAFGLLGIDVPERM 593


>gi|256822588|ref|YP_003146551.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796127|gb|ACV26783.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 588

 Score =  321 bits (822), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 118/631 (18%), Positives = 226/631 (35%), Gaps = 91/631 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +      +L     +    +++ +++ +   ++R      GH   N AM  ++    +P 
Sbjct: 1   MLVSIEHQLSQLFADAFESLELPRELGN---VQRSNRPDLGHYQCNGAMAAAKLGAGNPF 57

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             AE +VA +  +  ++ + +   GFIN++++   L + L     S   +G        K
Sbjct: 58  VTAEKVVAALSDNSLIEKLDVVRPGFINVFVNAESLAQTL-ESYGSDETFGSYEDKSDCK 116

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V I+F   N    MHVGH R A++GD+L  +  F GY+V  + ++ D G Q+  L   + 
Sbjct: 117 VMIDFGGPNVAKSMHVGHLRTAIIGDSLQRIFRFKGYQVVSDAHLGDWGTQMGMLIEGLK 176

Query: 183 WRYQQAL---------YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP------EE 227
            R    +         Y  +S +       +Y +  G   +D+  +E             
Sbjct: 177 KRQTDLVYFDADFSGPYPEESPVTIQDLEEIYPQESGLCKSDEAVAEKARQATLELQNGR 236

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                +  + V   +  ++ D   L +  D++  E D        I  +I  L  +G   
Sbjct: 237 AGYRALWKHFVDVSVATLKRDYGELGVSFDLWKGESDA----DPFIAKVIQQLEDKGL-- 290

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCK 344
                            D+  L+       D+       L KSDG+  Y   DLA    +
Sbjct: 291 --------------AVRDQGALIVPFKDDQDEAIMPPLILRKSDGAVMYGTTDLATLYER 336

Query: 345 -YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            Y    + ++YV+      + K++ A A  +                  +DG P K   R
Sbjct: 337 VYNDHANLVLYVVDGRQQQHFKQVFAAADLMGMNANTAYEHTYFGTVNGKDGKPFK--TR 394

Query: 404 AGDFIT-----------------------------LRHVVDEVGSDSVRFMMLWRKNSEL 434
           +G  +                                 +  +V   +++F  L     + 
Sbjct: 395 SGGVMKLHDLIQMAKEEARKKLAASNFGTEFDEDEKEEIAHKVAISTLKFADLRNFRIKD 454

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
             FD  K   + +     Y+    AR +SI R+A++          P  ++P       +
Sbjct: 455 YIFDLEK-FSEFEGKTGPYLLMQVARIKSILRKAEEAGAK------PGELMPT----SEN 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L   L ++P  ++     + P+ L  +LY+LA  F   +           +   ++ 
Sbjct: 504 EYDLTFGLLDFPVALDKTVDKRAPHYLCEHLYNLAQQFSSFYQKQH------IMNEPDKA 557

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                L+L     + +  GLN++G+E+   M
Sbjct: 558 RQASLLRLSQICLAQLEMGLNLLGIETLERM 588


>gi|331001659|ref|ZP_08325182.1| arginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413380|gb|EGG92747.1| arginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 589

 Score =  321 bits (822), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 121/627 (19%), Positives = 239/627 (38%), Gaps = 89/627 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               + + LK    K+  ++K     +  RP  C       N AM  ++     P+ IA 
Sbjct: 4   IIELISDELKSAFVKLSYDEKYGKVNISNRPDLCE---YQCNGAMAAAKEYQKKPIDIAN 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  +K +   + +     GFIN+ +S  ++ K +  +  +  +YG  L     K+ I+
Sbjct: 61  EVVEILKDNDSFEKIEAIMPGFININISNDFIEKYMKDMSAA-PKYGIELDNPSKKIIID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +  AN   P+H+GH R A++G++L  L  F G EV  + ++ D G Q+  +   +  R  
Sbjct: 120 YGGANVAKPLHIGHLRSAIIGESLKRLGRFFGNEVIADVHLGDWGLQMGLIIEELRERNP 179

Query: 187 QALY---NNDSDLP----------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           + +Y   N D + P          E  YP    K    E   + + E     +  + P  
Sbjct: 180 ELVYFKENYDGEFPKEAPFTLNDLEEIYPAASKKSKTDEEFKQRAQEATLALQSGYRPYR 239

Query: 234 KDYSVQAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           + +  Q +M +  +DLK     L +  DI+  E D     P  I+D+ D           
Sbjct: 240 EIW--QHIMNVSVEDLKKNYSSLLVDFDIWKGESDADPYIPDLIKDLEDR---------- 287

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE 346
                     +   +    L+    M GD  + P   + KSDG+  Y  +DL     + +
Sbjct: 288 ----------KIAGVSEGALVVDIAMEGDKKELPPCIIRKSDGAALYATSDLGTLIEREK 337

Query: 347 -RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRA 404
               D  IY+       +  +   V+           +       +  +DG P+K   R 
Sbjct: 338 LYSPDEYIYIADKRQELHYTQFFRVSRIAGIVPDNHELKYIGFGTINGKDGKPLK--TRD 395

Query: 405 GDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFD 438
           G  + L  V+ +                          VG  ++++  L  + ++   FD
Sbjct: 396 GGVVRLETVIKDIEDAVFAKIKESRDISDEEARNTAKIVGLAAIKYADLSNQATKDYIFD 455

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +     + N   Y+ Y   R +SI  +  +   +        ++       +    +L
Sbjct: 456 IDRFTSF-EGNTGPYILYTIVRIKSILEKYYESGSE------KVSLNDLTVPKEDIHKKL 508

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + LA Y  ++  A     P+K+  ++Y +++ F+  +        ++ +  +N      
Sbjct: 509 YMELAGYNEIMRAAWTELAPHKICQFIYSVSNTFNSFYH------EIKILSESNETKKKG 562

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
            L  +     ++ + ++++G+E+PN+M
Sbjct: 563 YLATILLTKELLEAAIDLLGIEAPNKM 589


>gi|149638964|ref|XP_001513391.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 695

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 121/626 (19%), Positives = 233/626 (37%), Gaps = 90/626 (14%)

Query: 3   LFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL-- 59
           + A F   +   L + +D   +   K +  I I R ++ A   LS  + +  S       
Sbjct: 117 MAAAFRRTIARQLSQVLDLPPENLIKSISAIPISRKQEVADFQLSLRSVLENSSRDNSTS 176

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-----YLRKILSSIVVSGIEYGR 114
           D    A+ +  ++K D  V  +   G G +N  ++        L+++       G++   
Sbjct: 177 DIQEQAQSLAKKLKCDTVVSEIS-TGPGTVNFKINRELLTKTVLQQVFEDDSKYGLKSEL 235

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
            L     KV +EF S N     H GH R  ++G+ +A+L    G+ VTR  Y+ D G Q 
Sbjct: 236 FLELPPKKVVVEFSSPNVAKKFHAGHLRSTIIGNFIANLNEALGHRVTRINYLGDWGMQF 295

Query: 175 NTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWL 230
             L        Y++ L +N        Y  V  +    +  +K + E    L   +++ L
Sbjct: 296 GLLGTGFQLFGYEEKLQSNPLQHLYDVYVQVNKEAADDKNVEKSAHEFFRRLETGDQEAL 355

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + K +   ++   +R   K L +  D +  E  +H       ++++  L  +G + + +
Sbjct: 356 SLWKKFRDLSITDYVRV-YKRLGVHFDDYSGESFYHE----KSQEVLKLLDSKGLLQKTM 410

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
                   ++K D                    ++++DG+  Y   DLA    + ++  F
Sbjct: 411 QGAAVVDLSEKGDSSLIC--------------AVMRNDGTSLYATRDLAAAIDRMDKYHF 456

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D+MIYV       + +++  +   +  + A       E  +    G+   M  R GD   
Sbjct: 457 DSMIYVTDKSQRRHFQQVFQILRLMGYEWA-------ERCQHVPFGIVQGMKTRRGDVTF 509

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  V++E                           VG  ++    L         F + +V
Sbjct: 510 LEDVLNEACLRMLDNMASSKTTKGLENPQETAERVGLAALIVHDLRGLLLSDYQFSWDRV 569

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
             Q++ +   ++QY +AR  S+            F     N        +   + ++ HL
Sbjct: 570 L-QTRGDTGVFLQYTHARLHSLEE---------TFGCAGLNGFNASCLQEPQSVSILQHL 619

Query: 503 AEYPRVIENATIAQEPYKLAFYLY---DLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             Y  V+  ++   +P  +  YL     LA+V H              ++ +  ++   R
Sbjct: 620 LRYDEVLYKSSQDLQPRHIVNYLLILSHLAAVAHK----------TLSIRNSPTEVAEAR 669

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  AV S++ SG+ ++G+    +M
Sbjct: 670 LHLFKAVRSVLASGMKLLGITPVTKM 695


>gi|212550359|ref|YP_002308676.1| arginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548597|dbj|BAG83265.1| arginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 592

 Score =  320 bits (821), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 109/641 (17%), Positives = 234/641 (36%), Gaps = 105/641 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  LK +  +   E      I +++ +    G+L T     L +    D
Sbjct: 1   MNI----QELIQKDLKRLYAREIPESS----IQLQKTKKEFEGNL-TLIIFPLLKISKKD 51

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
               A  I   +  +  +   + A KGF+NL LS +Y    L++I  +     + +    
Sbjct: 52  IEQTAMEIGEYLLKNQSIIIGYNAIKGFLNLTLSSTYWINSLNTIHRTKNYGMKKITNNS 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + IE+ S N   P+H+GH R  ++G +++ ++  +G ++ +   +ND G  I    L+
Sbjct: 112 PLIMIEYSSPNTNKPLHLGHIRNILLGYSISEILKATGNQIVKTNIVNDRGIHICKSMLA 171

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------------YSSELLNFPE 226
            + ++      N S     +  G Y     +E   +                  LL F  
Sbjct: 172 -WKKWGNGETPNSSGKKGDHLIGEYYVKFNQEYKKEILTMEASGLTPKEAEEKSLLMFEA 230

Query: 227 EKWLPIVK--DYSVQAMMKI--------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            + L   +  D     + KI         ++  K L +  D    E   +      I + 
Sbjct: 231 REMLRKWETGDPETIHLWKITNNWVHIGFKETYKTLGVDFDKIYYESQTYLEGKKKILEG 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL--FRSTMVGDDVDRPLLKSDGSYTYF 334
                 +G  Y+                +   +     S  +G+   + LL+SDG+  Y 
Sbjct: 291 F----EKGIFYKK---------------EDGSIWANLASNGLGE---KLLLRSDGTSVYI 328

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+   K ++ +   + MIY+ G++ + + + L  +   +  + ++  +     +    
Sbjct: 329 TQDIGTAKLRFDDYSINKMIYIAGNEQNYHFQALSLLLDKLGFEFSKNLIHFSYGMVELP 388

Query: 394 DGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRF 424
           +G   KM  R G  +    +++E                             +   ++++
Sbjct: 389 EG---KMKSREGTVVDADDLIEEMIQTAKEISNKLGKLGKCTDKETNEVYKIISMGALKY 445

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + F+  K       N   ++QY YAR +SI +++      +         
Sbjct: 446 FILKVDPRKNMTFNP-KESIDFNGNTGPFIQYTYARIKSILKKSNIKIQCI-------KS 497

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I      +  E  +I  L+++P +++ A    +P  +A Y + +A  ++  + +      
Sbjct: 498 ISTNIFLNEKEKNIIQLLSDFPTIVQEAADNFDPSIIANYTFCIAKEYNQFYHN------ 551

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++  N  +   RL L +  + II     ++G+  P  M
Sbjct: 552 YSILKEENEDIQKFRLILSYNTSKIIKMSFKLLGINVPERM 592


>gi|168705003|ref|ZP_02737280.1| arginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 580

 Score =  320 bits (821), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/610 (21%), Positives = 230/610 (37%), Gaps = 82/610 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     S  +  L  +         +L  I      +  +G    N AM L + LG  
Sbjct: 1   MNLLTQLRSLFEPALTGLAPDRAKVPDLLGAIK--PAANADNGDYQANCAMALGKQLGQK 58

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ +VA +  +  ++   +AG GFINL L P +L + L  I     + G +   K 
Sbjct: 59  PPEVAKALVAALPANDLLEPPTVAGPGFINLRLKPEFLARALQEIATD-PKLGVSPAAKS 117

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I+    N   P+HVGH R  ++GD L  ++ F G+ V  + ++ D G Q   L   
Sbjct: 118 KTFVIDLSGPNVAKPLHVGHLRSTIIGDALVRILRFLGHTVIGDNHLGDWGTQFGILLYG 177

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-----------------LLN 223
                  A +  D   P      +Y+    +    +   E                  L+
Sbjct: 178 YKNHRDDAAFAAD---PVRELLRLYIFVRKQAALAEGEDEEGGADNPVMAACRAETSKLH 234

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             + + + + K +   A M+++R   + L+++ D  + E  ++      + D++      
Sbjct: 235 ANDPENVALWKSFMP-ACMEMLRPIYERLDVKIDHALGESFYNPMLAGVVADMLAKGIAV 293

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++P  K    Q  +  +K          ++    + K DG++TY   DLA  K 
Sbjct: 294 ESKGAIVIPNAKGIVPQTPEEQKK----------EEPPAIIRKRDGAFTYTTTDLATIKY 343

Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC---------------- 386
           + E    D M+YV+G+  + + K + A A        +   +                  
Sbjct: 344 RAETWKPDAMLYVVGAPQALHFKTVFAQAKRWGVDGIEFQHVQFGSMLGADRKIFGTRKG 403

Query: 387 ---ELVRLYRDGMPIKMSKRAGDFITLR---------------HVVDEVGSDSVRFMMLW 428
              EL+ L  +   + + K   +    R                + + VG  +V++  L 
Sbjct: 404 GALELMELLNEAAALSLQKYEANTAERRSFGHKIYEAEASEKQEIAEVVGVGAVKYADLS 463

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +  +    FD  K+   +  N   Y+QYAYARCRSIFR+       +D  +F R   P  
Sbjct: 464 QNRTTDYVFDLDKMT-ATVGNTAAYMQYAYARCRSIFREGG-----VDEGVF-RTAPPAV 516

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           +    +E  L +HL   P  +E A     P+ +  YL+DLA      +           +
Sbjct: 517 TLPHAAERALALHLLRLPEAVEAAAADYAPHLITAYLWDLAKATSVFYEGC------SVL 570

Query: 549 QANNRKLTMM 558
           +A+  +L   
Sbjct: 571 KADTPELKAS 580


>gi|325188174|emb|CCA22714.1| arginyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 803

 Score =  320 bits (821), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 110/628 (17%), Positives = 217/628 (34%), Gaps = 87/628 (13%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
            L     +  +  +      +     ++D   + R ++   G    N+AM +   +    
Sbjct: 217 NLLYIVETLFQKAIDSAFPGLHPAVAVVD---VTRTKNAQFGDYQCNSAMSIFTAMKGTP 273

Query: 59  ---LDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
                P  +A  I+  +K   +      + +AG GFIN  L PS+L   L S++  G + 
Sbjct: 274 NALKSPRDVANAIINAMKQIENPVLQSELTVAGAGFINARLEPSFLSARLVSLLKHGAQ- 332

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
             +      KV ++F S N    MHVGH R  ++GD +  ++ F GY+V R  ++ D G 
Sbjct: 333 -ASPETNRIKVVVDFSSPNIAKDMHVGHLRSTIIGDAICRILEFQGYDVARINHVGDWGT 391

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q   L   +   Y        +                 +L   Y +    F +++    
Sbjct: 392 QFGMLICHLIDAYPTWESEQPN---------------VTDLTKLYKAAKERFDQDEA--- 433

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGIL 291
            +  S   ++ +   D    +  H ++    D  R +   + D +  NL   G  Y    
Sbjct: 434 FRQRSKDQVVLLQSGD----SHSHHVWEILCDISRKEYQKVYDRLQVNLTEMGESYYNPY 489

Query: 292 PPPKSKTTQK---CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
            P   +  +K    +     L+  +          L KSDGS  Y   D+A    + +E 
Sbjct: 490 IPGVIERLEKKGITENSDGALVVFTKQFKQPF--MLRKSDGSSLYDTTDIAALWYRIHEM 547

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +IY      + +   L  VA          + +         D    +   R+G+ 
Sbjct: 548 QAAWIIYYTDYTQNDHFSLLFEVARMGGILDPAKHRVNHIGFGTVNDESGKRFKTRSGEV 607

Query: 408 ITLRHVVDE-------------------------------VGSDSVRFMMLWRKNSELLD 436
           + L  ++DE                               +G  +V++  L +  +    
Sbjct: 608 VRLVELLDEAKERMKTQLLDRIQGGQTSLPADQVDTAAEKIGYGAVKYFDLRQSPTSSYV 667

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           F + ++   +  +   Y+ +AYAR  SI R+A            P   +P     + +  
Sbjct: 668 FSYDRMLS-TNGDTAVYLLFAYARLSSIIRKAGIDIASKVSSADPSMALPVVHPCELALA 726

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
                L ++  +++         +L  YLY ++              + R +    ++  
Sbjct: 727 L---ELLQFQDILKLINRDLSTNRLCSYLYTISEKVQTF------LTQCRVIGCEEQE-- 775

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNE 584
             RL L  A  +++     ++G++  ++
Sbjct: 776 -NRLFLCQATVNVMQRCFCLLGIDPLDQ 802


>gi|307168598|gb|EFN61656.1| Arginyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 642

 Score =  320 bits (820), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 127/618 (20%), Positives = 230/618 (37%), Gaps = 110/618 (17%)

Query: 11  LKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-----GLDPL 62
           + + L EI  K         +   +++    +   G    N+AM L++ L      + P 
Sbjct: 92  INDTLCEIFRKAITAAYPDVLNPPVIVTTSNNPKFGDYQCNSAMPLAQQLSSSGNKVIPR 151

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IA  I+++++  P VD   IAG GFIN+YL   + + +LS+ +  G         K  +
Sbjct: 152 NIANNIMSKLEESPLVDKYEIAGAGFINIYLKRDFGQLVLSNWLKIGEVLP--PYVKKKR 209

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V ++F S N    MHVGH R  ++GD+++ L+ + G++V R  +I D G Q   L   + 
Sbjct: 210 VIVDFSSPNIAKEMHVGHLRSTIIGDSISRLLEYLGHDVLRLNHIGDWGTQFGMLIAHLQ 269

Query: 183 WRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            ++     +     DL + +Y    ++    E   K + E +   +     I K +  + 
Sbjct: 270 DKFPNYSTVTPAIQDL-QAFYKESKIRFDSDEEFKKRAYECVVKLQAFEPNITKGW--KM 326

Query: 241 MMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  + R + + L  + DI + E    F++     +  I+  L  +  +            
Sbjct: 327 ICDVSRKEFEKLYTRLDIKLIERGESFYQK---RMELIVKELESKNLL------------ 371

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMG 357
               + D  + +      G  +   ++KSDG +TY  +D+A  K + E    D       
Sbjct: 372 ----EEDNGRKVMWGEKHGVGIPLIIVKSDGGFTYDTSDMAAIKQRIEEERADWA----N 423

Query: 358 SDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +  S + + LE+ A      K+      +   V L  D    K   R+G+ + L  ++DE
Sbjct: 424 AGQSLHFQMLESCAKKAGILKSFHRVHHVGFGVVLGEDKK--KFKTRSGETVKLIELLDE 481

Query: 417 -----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                                        V    +++  L    +    F F K+ E  K
Sbjct: 482 GLKRTLQKLKEKERDKVLSEEELKAAQESVAYGCIKYADLLHNRNHEYVFSFDKMLE-DK 540

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N   Y+ YA  R RSI R AK    +L        +    S     E +L   L ++P 
Sbjct: 541 GNTAVYILYALTRIRSIARMAKITQDELRKHARDIPI----SLEHEKEWKLAKVLLKFPD 596

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           ++ +    Q                                     K+ + RL L  A A
Sbjct: 597 LLLDIKKNQA--------------------------------GEIVKVHIGRLLLTEATA 624

Query: 568 SIINSGLNIIGVESPNEM 585
            ++     ++G++    M
Sbjct: 625 MVLEKCFTLLGLKPVARM 642


>gi|330836969|ref|YP_004411610.1| arginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748872|gb|AEC02228.1| arginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 587

 Score =  319 bits (819), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 117/619 (18%), Positives = 237/619 (38%), Gaps = 78/619 (12%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D+ + +   + ++  +          I+++ P     G L+       ++ L   P  IA
Sbjct: 8   DWKAVIAAQIGDMAREAGATGPKPADIIVQEPPRPDMGDLAFPL-FAYAKLLRSAPPHIA 66

Query: 66  ELIVARIKIDPDVDSVF--IAGKGFINLYLSPSYLRKILSSIVV-SGIEYGRNLIGKGTK 122
            L+  +I+  P   +    ++G  ++N+ +    +   LSS++   G  YG+     G +
Sbjct: 67  ALLKEKIEALPTRPAGELLVSGP-YLNVKIDIPTIAAELSSMIAREGTSYGKGSAFDGKR 125

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +EF   N   P+H+GH R   +G++++ ++  +G +V +   IN+ G  I    L+ +
Sbjct: 126 VMVEFSCPNTNKPLHLGHLRNDSLGESVSRILKANGADVRKVNLINNRGVHICKSMLA-Y 184

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYS 237
            ++        + +    + G Y     +   +     + + E+L   E      +  + 
Sbjct: 185 QKFGSGETPESTGIKGDKFVGNYYVRFAQWEKEDPSALEQAQEMLRAWEAGEPETLALWE 244

Query: 238 VQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                    +    +   I  D +  E + ++      +DII     +G           
Sbjct: 245 RMNAWTLDGLAQTYRKTGIDFDAYYYESNTYKLG----KDIILAGLEKGVFQRD------ 294

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
                        +    + +  D  + LL+SDG+  Y   D+     ++E   FD++IY
Sbjct: 295 ---------SDGSVWMDLSDIKLDR-KVLLRSDGTSLYMTQDIGTAVQRHEDWPFDSLIY 344

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+ S+   + + L  V   +    A  +  L   +V L       KM  R G  +    +
Sbjct: 345 VVASEQQYHFRVLFHVLEKLGYSWAPTLYHLSYGMVNLPEG----KMKSREGTVVDADDL 400

Query: 414 VD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +D                            +   ++ + +L    S+ + F+  K     
Sbjct: 401 IDNLTALAKEEIISKGRENDVDDINATAASIALGALNYYLLQVTPSKDMIFNP-KDSISF 459

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QY  AR  S+ R+ +D+  D     F  +V+  +      E +L+  LA YP
Sbjct: 460 NGNTGPYLQYMGARISSMMRKWEDMREDFKDVPFDPSVLILDD-----ERELVRSLAAYP 514

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+  A   ++P  L  YLYDL+  F   +           ++A+++ L   R++L   V
Sbjct: 515 EVVGKAGEGKDPSVLTAYLYDLSRTFSRWYHDN------PVLKADSKSLVCARVELSSMV 568

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++ +   +IGV    +M
Sbjct: 569 LYVLKNAFYLIGVPFLEKM 587


>gi|210609959|ref|ZP_03288188.1| hypothetical protein CLONEX_00372 [Clostridium nexile DSM 1787]
 gi|210152705|gb|EEA83711.1| hypothetical protein CLONEX_00372 [Clostridium nexile DSM 1787]
          Length = 588

 Score =  319 bits (818), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 117/628 (18%), Positives = 234/628 (37%), Gaps = 86/628 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
               +  L   L+    K   +K+     +  RP  C       N AM  ++     P+ 
Sbjct: 1   MKKIADILTFELEAAFEKAGYDKQYAKVTLSNRPDLCE---YQCNGAMAAAKAYKKAPIM 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +V  +K    ++ V     GFIN+ L   ++   L  +     + G     K   +
Sbjct: 58  IANDVVEVLKESVCIEQVEAVNPGFINIILDGEFVASYLGKMSEQ-EKLGVEEPTKQKTI 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++  AN   P+HVGH R AV+G+++  +  + G+++  + ++ D G Q+  +   +  
Sbjct: 117 IVDYGGANVAKPLHVGHLRSAVIGESVKRIGKYVGHKMIGDVHLGDWGYQMGLVITELKK 176

Query: 184 RYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV----KDY 236
           R  +  Y +D    + PE     +         A  Y+ E  ++ EE             
Sbjct: 177 RKPELPYFDDQFEGEYPEESPFTITELEEIYPTASAYAKEHEDYKEEALQATFLLQNGHR 236

Query: 237 SVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
              A+ K I        + +  ALN++ D++  E D        I ++++ + ++GY + 
Sbjct: 237 GYTAIWKHIMNVSVADLKKNYGALNVEFDLWKGEADAQPY----IPEMVEYMKKEGYAH- 291

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY 345
                          +D+  L+       D  + P   +LKSDG+  Y   DLA    + 
Sbjct: 292 ---------------IDQGALVVDVKEENDTKEIPPCMILKSDGAALYDTTDLATLIERE 336

Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKR 403
           +    D +IY+       +  ++   A         + +       +  +DG P K   R
Sbjct: 337 KLYHPDEVIYLADKRQELHFVQVFRCAKKTKIINENMELKFIGFGTMNGKDGKPFK--TR 394

Query: 404 AGDFITLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDF 437
            G  + L  ++++                          V   ++++  L  + ++   F
Sbjct: 395 DGGVMRLESLINDINEEMYKKIAENRTMSEEEARKTAQMVALSAMKYGDLSNQAAKDYVF 454

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D  +     + N   Y  Y   R +SI  +  +   D             +     SE  
Sbjct: 455 DVERFISF-EGNTGPYNLYTIVRIKSILAKYAESGKDA-------AKCKMKKPQTQSEKA 506

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L++ +A++  VIE A     P+K+  Y+YDL++ F+  +         + +   N     
Sbjct: 507 LMLEVAKFNNVIETAFEELAPHKICAYIYDLSNAFNRFYH------ETKILSEENEDRKA 560

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
             + L+      + + ++++G E+P  M
Sbjct: 561 GFIALLLITKRALEACIDMLGFEAPERM 588


>gi|315651308|ref|ZP_07904336.1| arginine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315486460|gb|EFU76814.1| arginine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 590

 Score =  319 bits (818), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 116/626 (18%), Positives = 235/626 (37%), Gaps = 86/626 (13%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               + + LK    K+  + K     +  RP  C       N AM  ++     P+ IA 
Sbjct: 4   IIELISDELKFAFAKLYDDDKYGKVNISNRPDLCE---YQCNGAMAAAKVFKKKPIDIAN 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  ++     D +     GFIN+ +S S++ K +  +  +  +YG        K+ I+
Sbjct: 61  EVVELLRESDSFDKIEAVMPGFININISNSFIEKYIKDM-SNAPKYGIEFDSPAKKIIID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +  AN   P+H+GH R A++G++L  +  F G  +  + ++ D G QI  +   +  R  
Sbjct: 120 YGGANVAKPLHIGHLRSAIIGESLKRMGRFFGNGMIADVHLGDWGLQIGLIIEELRERKP 179

Query: 187 QALY---NNDSDLP----------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP-- 231
             +Y   N D + P          E  YP    K    E   + + E     +  + P  
Sbjct: 180 DLVYFKENYDGEFPKEAPFTLNDLEELYPAASKKSKVDEGFRQRAQEATLELQNGYKPYR 239

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            +  + +   ++ ++ +  +L +  D++  E D     P  I+D+ D             
Sbjct: 240 AIWRHIMNLSIEDLKKNYGSLLVDFDLWKGESDADPYIPDLIKDLEDR------------ 287

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-R 347
                   +   +    L+    M GD  + P   + KSDG+  Y  +DL     + +  
Sbjct: 288 --------KIARVSEGALVVDIAMDGDKKELPPCIIRKSDGAALYATSDLGTLIEREKLY 339

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK-MSKRAGD 406
             D  IY+       +  +   VA          N LL  +     +G   K +  R G 
Sbjct: 340 SPDEYIYIADKRQELHYTQFFRVAKIAGIVPD--NHLLKYIGFGTINGKDGKPLKTRDGG 397

Query: 407 FITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            + L  V+ +                           VG  ++++  L  + ++   FD 
Sbjct: 398 VVRLETVIKDIEDAVFAKIKETRDEVSDEEARNTAKIVGLAAIKYADLSNQAAKDYIFDI 457

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     + N   Y+ Y   R +SI  +  +   +        ++       +    +L 
Sbjct: 458 DRFTSF-EGNTGPYILYTIVRIKSILEKYYESGNE------KVSLNDLTIPKEDIHKKLY 510

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + LA Y  ++  A     P+K+  ++Y +++ F+  +        ++ +  ++ +     
Sbjct: 511 MELAGYNEIMRAAWTELAPHKICQFIYSVSNTFNSFYH------EIKILSESDEEKKKGY 564

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L  +     I+ S +N++G+E+P++M
Sbjct: 565 LATILLTKKILESAINLLGIEAPDKM 590


>gi|298207765|ref|YP_003715944.1| arginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850403|gb|EAP88271.1| arginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 592

 Score =  319 bits (818), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 113/612 (18%), Positives = 224/612 (36%), Gaps = 97/612 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           L+ +  +  R    G + T     + R +  +P+ I   I   +    +  S F   KGF
Sbjct: 23  LESVEFQATRKEFEGDI-TVVVFPMLRVVKGNPVQIGNQIGDYLVEHVEEVSAFNVVKGF 81

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+ +S  Y       I+       +    +G  V +E+ S N   P+H+GH R  ++G 
Sbjct: 82  LNIVISDLYYNAAFQEILSEKHFGFKKA--EGDAVMVEYSSPNTNKPLHLGHIRNNLLGY 139

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +++ ++  SG  V +   IND G  I    L+ + ++ +      + L      G Y   
Sbjct: 140 SVSEILKASGKNVYKTQIINDRGIHICKSMLA-WQKFGKGETPESTGLKGDKLVGNYYVR 198

Query: 209 VGKELADKYSSELLNFPEEKWLP-----IVKDYSVQAMM-------------------KI 244
             KE   + +  + +  EEK        +++  ++                       K 
Sbjct: 199 FDKEYKKQVAEIVASGTEEKEAKTQAPLLLEAQAMLKQWEAGDEDVVNLWKMMNGWVYKG 258

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             +    L +  D +  E D +       +DII+    +G  ++                
Sbjct: 259 FEETYTNLGVDFDTYYYESDTYLLG----KDIIETGLEKGVFFKK--------------- 299

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSG 362
           +   +    T  G D ++ +L+SDG+  Y   DL     + +   D   MIY +G++   
Sbjct: 300 EDGSVWCDLTEDGLD-EKLVLRSDGTAVYMTQDLGTAVQRVKDYPDVGGMIYTVGNEQDY 358

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-------- 414
           + K L  +   +    A+    L   +     G   KM  R G  +    ++        
Sbjct: 359 HFKVLFLILQKLGYSWAEYLYHLSYGMVDLPSG---KMKSREGTVVDADDLMVDMTQTAK 415

Query: 415 ---------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  +G  ++++ +L     + + F+  +  +  + N   +
Sbjct: 416 TLSEDLGKLDGYSAEEKEELYKTIGLGALKYYILKVDPKKRILFNPEESVDF-QGNTGPF 474

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY YAR +SI R++K              V          E +L+  + ++P VI+ A 
Sbjct: 475 IQYTYARIQSILRKSKLDT--------NAPVAETPKSLHPKEKELLKIMLQFPEVIQQAA 526

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A Y YDL   F+  + +      +  +  ++  L   R+ L   V+ +I   
Sbjct: 527 QQHSPALIANYTYDLVKEFNSFYQN------VTILGTDDEVLKTFRVALSFKVSELIKDA 580

Query: 574 LNIIGVESPNEM 585
            +++G++ P  M
Sbjct: 581 FSLLGIQVPVRM 592


>gi|304320020|ref|YP_003853663.1| arginyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298923|gb|ADM08522.1| arginyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 592

 Score =  319 bits (817), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 109/627 (17%), Positives = 219/627 (34%), Gaps = 91/627 (14%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           +L+  L  +  +    + +  +   ++R           N A+  ++    +P  I E +
Sbjct: 6   QLRQRLGALVAEAFAAEGVDPQFGAVQRSDRPDLAPFQCNGALAAAKQAKANPRAIGEAV 65

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY-GRNLIGKGTKVNIEF 127
             R+  +P  + V +AG GF+NL  +   L +  +S+         +  + +   + +++
Sbjct: 66  KRRLDDNPIFEKVELAGPGFLNLTPADGALAEAAASLSTDPHLGAWQRPVDERQTIILDY 125

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N   P+HVGH R A++G++L  L    G +V  + ++ D G Q+  L   +      
Sbjct: 126 GGPNVAKPLHVGHLRAAIIGESLKRLFRAVGDDVLGDIHLGDWGLQMGQLITQLAEEQPD 185

Query: 188 ---------ALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNFPEEKWLP 231
                      Y   S +       +Y +      AD       + ++  L      +  
Sbjct: 186 LPYFDADFTGPYPTQSPVTVDDLAALYPRASAASKADPDRRAAAQAATMDLQQGRPGYRA 245

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +   + V      +  D   L +  D++  E          I  + + L  +G V E   
Sbjct: 246 LWAHF-VDVSKAALEADYAELGVTFDLWRGEASVQ----DRIGPLTERLKAKGVVTES-- 298

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYER- 347
                            L+       D        ++KS+GS  Y + D+A  + + E  
Sbjct: 299 --------------EGALVIDVAREADKKTLNPVMMIKSNGSVGYHSTDVATIEERVEEF 344

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           G + ++YV+    + + + +          +A              DG P K   R G  
Sbjct: 345 GAERIVYVVDQRQAQHFEEVFRAVERAGLIEADRLEHAGFGTMNGPDGRPFK--TREGGV 402

Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438
           + LR ++D+                             VG  +++F  L    +    FD
Sbjct: 403 LRLRDLIDQVVEAARRRLAEGGFSADEDSAVREDTARKVGIAALKFGDLSNPRTSDYVFD 462

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +     +     Y+ Y   R RS+  +A +            +        D +E QL
Sbjct: 463 VDRFV-TFEGKTGPYLLYGVVRVRSVIAKAGER----------PDPAAPILLTDEAERQL 511

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           ++ ++ Y   +E A   + P+ +  + Y LA  F   ++H R           +  +   
Sbjct: 512 VLEMSLYGDAVEAAYRRRLPHLICDHAYRLAQAFSRFYTHCR------IGDEADPAVRAS 565

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L    A  + + L ++G++ P +M
Sbjct: 566 RLALALLTARQLEAALTLLGIDVPEKM 592


>gi|302338315|ref|YP_003803521.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635500|gb|ADK80927.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 593

 Score =  319 bits (817), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 117/628 (18%), Positives = 225/628 (35%), Gaps = 78/628 (12%)

Query: 1   MYLFADFSSRLKNYLKEID------CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS 54
           M    D  +  K  + +         ++  ++     ++ ERP     G L+       +
Sbjct: 1   MADITDTKTLWKGAVADALFRHAESMELSFQRPDPASLIAERPPKPEMGDLAFPM-FPFA 59

Query: 55  RPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLS-PSYLRKILSSIVVSG 109
           +     P+ IA  +    K           V  +G  ++N+  +  S +  +L  +    
Sbjct: 60  KLFRTSPMAIASAVADHAKQTAAALGASGEVEASGP-YVNVRYNLASMMPGLLKQVFSEA 118

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
             YG+  +  G K+ IEF   N   P+H+GH R   +G++++ ++  +G +V +   IND
Sbjct: 119 EAYGKTDLYAGEKIMIEFSCPNTNKPLHLGHLRNDALGESVSRILKANGADVRKVNLIND 178

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-----LADKYSSELLNF 224
            G  I    L+ +  + +            ++ G Y             A++ + ELL  
Sbjct: 179 RGIHICKSMLA-YSVFGKGKSPESEGCKGDHFVGDYYVKYNSWAKEEPEAEERARELLRK 237

Query: 225 PEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            E      V+ +          I +  +   I  D    E   +    S  RD +    R
Sbjct: 238 WEAGDPETVELWKTMNRWTIDGIGETYRKTGISFDDIYYESKTY----SAGRDEVLKGLR 293

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G  Y+                +   +      +  D  + LL+SDG+  Y   D+    
Sbjct: 294 NGVFYK---------------EEDGSVWVDLAEINLDK-KVLLRSDGTTLYLTQDIGTAI 337

Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP--- 397
            ++ +  F  +IYV+ S+   + K L  V   +    A+ +  L   +V L    M    
Sbjct: 338 ARHGDWPFKRLIYVVASEQQYHFKVLFHVLKKLGFDWAENLYHLSYGMVNLPEGKMKSRE 397

Query: 398 --------------------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                               IK   R GD   +    + VG  ++ + +L    ++ + F
Sbjct: 398 GTVVDADDLIAELSSMAAAEIKTKGREGDVGDVEKTAEAVGLAALNYYLLQISPAKDMIF 457

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D  K       N   Y+QY  AR  S+ R+ ++   +        ++I         E +
Sbjct: 458 DP-KESISFNGNTGPYLQYMGARISSMLRKFEERSDEFKGATVDPSLITT-----IEERE 511

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           LI  ++ +P  +  A     P  +  YLYDL+  F  ++   +       +  +++ L  
Sbjct: 512 LIKLISLFPEKVAQAGAEFNPSIVTTYLYDLSRTFSRYYHDNQ------ILNNDDKNLAF 565

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL L   V  ++ +   ++G+     M
Sbjct: 566 TRLSLAKGVLQVLKNAYWLVGIPFLEVM 593


>gi|291459323|ref|ZP_06598713.1| arginine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418577|gb|EFE92296.1| arginine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 634

 Score =  319 bits (817), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 126/644 (19%), Positives = 234/644 (36%), Gaps = 97/644 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVE------KKILDRIVIE-RPRDCAHGHLSTNAAMILSR 55
           LF +    +K  L + +  +K           L R+ +  RP  C      +N AM  ++
Sbjct: 27  LFLEREENVKGILDKTEEAVKAAFSLCGYDPELGRVTVSNRPDLCE---YQSNGAMAGAK 83

Query: 56  PLGLDPLTIAELIVARIKIDPDVD-----SVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
               +P+ IA+ +  R++     +      V     GF+NL L  ++L   L+ +  +  
Sbjct: 84  RYHKNPMEIAKELAERLREQGSTEVPIFRRVEAVRPGFLNLDLGEAFLSGYLNEM--NAK 141

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +G ++ +++  AN   P+HVGH R AV+G+ L  L    G     + ++ D 
Sbjct: 142 EKLGLDPKEGKRIIVDYGGANVAKPLHVGHLRSAVIGEALKRLALRMGNHAIGDVHLGDW 201

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G Q+  +   +  R         S+L E Y              +  + +      E   
Sbjct: 202 GLQMGLIIAELSDRGLSCEDLTLSELEEIYPAASKKAKEKDANGELLNPDFAKRAHEATK 261

Query: 231 PI-----VKDYSVQAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            +           + +M++ + DLK    AL++  +++  E D     P     +I+ L 
Sbjct: 262 ELQSGDKACRRIWEKIMELSKADLKKNYDALDVHFELWKGESDAEPYIPG----LIEELV 317

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
           R+G  YE                 +  L+      GD  + P   + KSDG+  Y  +DL
Sbjct: 318 RKGLAYES----------------QGALVVDIAEPGDKKELPPCMIRKSDGASLYATSDL 361

Query: 339 AYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDG 395
                + E+ F  D  IY+  S  S +  +   VA           +  +       +DG
Sbjct: 362 GTILDR-EKNFHLDRYIYIADSRQSLHYTQFFRVAKKAGFVPPDTELDYIGFGTMNGKDG 420

Query: 396 MPIKMSKRAGDFI----------------------------TLRHVVDEVGSDSVRFMML 427
            P K   R G  +                                  D V   ++++  L
Sbjct: 421 RPFK--TREGGVLRLELLIRDTRESVLARIRASRGEEMSGREAEETADVVALAALKYGDL 478

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             + +    FD  K     + N   Y+ Y   R  SI R+  +    ++F      +   
Sbjct: 479 QNQATRDYVFDLEKFT-AFEGNTGPYILYTIVRIASILRKYAEA-KGMEFHGAEDWIREH 536

Query: 488 ESEFDT---SEL---QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            SEF+     E    +L + LA +   ++ A     P+K+  Y+Y L++ F+  +     
Sbjct: 537 GSEFEIRIMEEKSGYELQLSLARFQDEMKAAWKELAPHKICSYIYKLSNDFNSFYH---- 592

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++ +   + +    RL  +     I+N  ++ +G  +P  M
Sbjct: 593 --EVKILAEPDEEKKKSRLATLILSWKILNDCIHTLGFSAPERM 634


>gi|213962519|ref|ZP_03390781.1| arginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954845|gb|EEB66165.1| arginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 597

 Score =  319 bits (817), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 108/641 (16%), Positives = 234/641 (36%), Gaps = 103/641 (16%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            L       +   ++E+          L+ + +++ +    G + T     L R +  +P
Sbjct: 3   NLNDILKQHILQAVQELY------NVSLENVELQQTKKEFVGDV-TLVVFSLLRHIKGNP 55

Query: 62  LTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           + I E I   +K       + F   KGF+NL ++ +Y    L+  +    ++G       
Sbjct: 56  VQIGEQIGTYLKEKAGNLVTDFNVIKGFLNLVIADTYYLNFLTE-IKDNPQFGLATPNSK 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G  I   ++ 
Sbjct: 115 EAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRGIHICK-SMV 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + R+       ++ L      G Y     K   ++                       +
Sbjct: 174 AWQRFGNGETPENTGLKGDKLVGNYYVAFDKAYKEEIQELIAQGKSKEEAEKQAPIFVAA 233

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E+L   E     ++K +               K L +  + +  E + +       +DI
Sbjct: 234 QEMLRQWEAGNPEVMKLWKQMNGWVYDGFAVTYKNLGVDFNSYYYESNTYLLG----KDI 289

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++   ++G  ++                +   +    T  G D ++ +L++DG+  Y   
Sbjct: 290 VEQGLQKGVFFKK---------------EDGSVWCDLTADGLD-EKLVLRADGTSVYITQ 333

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYR 393
           D+     + +   D   M+Y +G++   + K L  +   +    A  +  L   +V L  
Sbjct: 334 DMGTAIQRVKDYPDVKGMVYTVGNEQDYHFKVLFLILKKLGYDWASHLYHLSYGMVDLPS 393

Query: 394 DGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRF 424
                KM  R G  +    ++ E                             +G  ++++
Sbjct: 394 G----KMKSREGTVVDADDLIAEMEQTAKVISQELGKLDGYTEAQKEDLYHTIGLGALKY 449

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + FD  K     + N   ++QY YAR +SI R+  +     +  +   + 
Sbjct: 450 YILKVDPKKRILFDP-KESIDFQGNTGPFIQYTYARIQSILRKYAETNNSKEITVIQPDA 508

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           +         E  L+  +  +P ++++A     P  +A Y+YDL   F+  + +      
Sbjct: 509 LQ------EKEKNLLKSITLFPSIVQDAADNYSPAVVANYVYDLVKDFNSFYQN------ 556

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +   +      R+ L   +  II     ++G++ P  M
Sbjct: 557 VSILGEEDANKRHFRVALSKKIGEIIAESFKMLGIQVPERM 597


>gi|224048451|ref|XP_002198225.1| PREDICTED: arginyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 579

 Score =  318 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 128/624 (20%), Positives = 236/624 (37%), Gaps = 95/624 (15%)

Query: 7   FSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMI--------LSRPL 57
           F   + + L + +D   +   K +  + + + R  A      + A I        L++ L
Sbjct: 6   FRRSIASQLSKVLDLPPENLIKSISAVPVSKKRHVA--DFQLSIASIIENSSGDGLAQDL 63

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNL 116
            L     A+ +  R+K D  V ++  AG G +N  ++   L K  L  +   G EYG   
Sbjct: 64  HLQ----AQQLAERLKCDSVVSAIS-AGPGTVNFTINRELLAKTVLQQVWKDGSEYGVKS 118

Query: 117 ----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                    K  IEF S N     H+GH R  +VG+ +A+L    G+EV R  Y+ D G 
Sbjct: 119 ELFSTVPRQKAVIEFSSPNIAKKFHIGHLRSTMVGNFIANLKVALGHEVVRINYLGDWGM 178

Query: 173 QINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKW 229
           Q   L +    +  ++ L ++        Y  +      + +            E  E+ 
Sbjct: 179 QFGLLGVGFQSFGNKEKLKSSPLQHLFEVYVQINQAAEDENIKKLAKDFFRKLEEHDEQT 238

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L I K +   ++ + IR   K L +  D +  E  +        ++++  L  +G + + 
Sbjct: 239 LSIWKQFRDLSIEEYIRI-YKRLGVHFDEYSGESFYQE----KAQEVLKMLEDKGLLQKT 293

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG- 348
           I        ++K D+      F +          +++SDG+  Y   DLA    +  +  
Sbjct: 294 IKGTGIVDLSEKKDLS----TFST----------VMRSDGTSLYITRDLAAAIDRMNKHS 339

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D MIYV     S + + L  +   +    A+     C+ V     G+   M  R G+ I
Sbjct: 340 WDTMIYVTDKSQSNHFQHLFQILKLMGYDWAE----RCQHVSF---GLVQGMKTRRGEVI 392

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLD---------------------------FDFCK 441
            L  V++EV S  ++ M   +   E+ D                           F + +
Sbjct: 393 FLEDVLNEVRSRMLQNMTSTKTTKEIQDPVETAEKVGLAALIIQDFRGLLSSDYQFSWDR 452

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
              QS+ +   ++QY YAR  S   Q        D ++            +   + ++ H
Sbjct: 453 AL-QSRGDTGVFLQYTYARLHS-LEQMHGNAELTDVNVS--------CLQEPDAISVLQH 502

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           L  Y  V+  ++   +P  +  YL  L+ +            +   V+ +   +   RL 
Sbjct: 503 LLRYDEVLYRSSQDLQPKHIVSYLLTLSHL-------AAVAHKTLPVKGSAPAVAQARLC 555

Query: 562 LVHAVASIINSGLNIIGVESPNEM 585
           L HA  S++ +G+ ++G+    +M
Sbjct: 556 LFHAARSVLANGMKLLGITPVTQM 579


>gi|203288032|ref|YP_002223047.1| arginyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690575|sp|B5RPU2|SYR_BORRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|201085252|gb|ACH94826.1| arginyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 585

 Score =  318 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 127/619 (20%), Positives = 250/619 (40%), Gaps = 74/619 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + AD  ++++  +KE+     ++   ++ IV+++P     G LS       S+ L L   
Sbjct: 5   IKADLENKIQKTIKELALSSNIKLDKIN-IVMQKPPKSEMGDLSI-LIFEFSKILKLSIP 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121
            I + I+ +I  +    S+   G  ++N+  +   Y++  +  +      YG N   +  
Sbjct: 63  VITQEIIKQIGNEYKTKSM---GP-YLNIKFNRKEYIQNTIKKVNKEKENYGANNSLQNK 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  IEF S N   P+HVGH R  ++G++L+ ++  SG +VT+   IND G  I    L+ 
Sbjct: 119 KTIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGSKVTKINLINDRGTHICKSMLA- 177

Query: 182 FWRYQQALYNNDSDLPEGYYPGV-YLKHVGK-----ELADKYSSELLNFPEEKWLPIVKD 235
           + ++   +    +     +  G  Y+K+        E+A+    +LL   E+     V+ 
Sbjct: 178 YKKFGNNITPEIAQKKGDHLIGDFYVKYNEYASQNSEIAENEIQQLLYQWEQGDEKTVQL 237

Query: 236 YSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++      I  I++     NI  D    E +  +      R+++ N  ++G  Y+     
Sbjct: 238 WTKLNKWAIDGIKETYNTTNITFDKIYLESEIFKIG----REVVINGLKEGLCYKREDGA 293

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF-KCKYERGFDNM 352
                  + +    Q             + LL+++G+  Y   DL      K E  FD M
Sbjct: 294 ICINIPTETNNIDNQNF---------KQKVLLRANGTSIYLTQDLGNIVARKNEFDFDEM 344

Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IYV+GS+   + K L  VA  +    +  +  L   +V L       KM  R G+ I   
Sbjct: 345 IYVVGSEQIHHFKTLFYVADKLGITNENNLIHLSYGMVNLPEG----KMKSREGNIIDAD 400

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ +                         +   ++ + +L     + + F+  +    +
Sbjct: 401 NLIHDLSQSTMLELKKRYENEQNLQKLALNISLGAIHYYLLKTAIHKDILFNKTESLSFT 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QY  AR  SI  +  ++         P      +   + +E ++I  ++E+ 
Sbjct: 461 -GNSGPYIQYVGARINSILDKYNNLN-------LPNKNTNFDLLINENEWEIIKIISEFE 512

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I  A+  + P  +A Y Y LA  F  ++         + +  +N +LT  R+ L  AV
Sbjct: 513 EYIIKASKDRNPSIIANYSYLLAKNFSTYYQD------TKIIDKDNLELTHARIDLAKAV 566

Query: 567 ASIINSGLNIIGVESPNEM 585
              I + ++++ +    +M
Sbjct: 567 LQTIKNCMHLLNIPYIQKM 585


>gi|301166548|emb|CBW26124.1| arginyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 585

 Score =  318 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 112/622 (18%), Positives = 245/622 (39%), Gaps = 83/622 (13%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +    +  ++  +       ++  + ++  +I    +   GH +      L++     P 
Sbjct: 8   ILKQLTEAIEQSIGANYQGAEISSEQINS-LISIAPNMKMGHFAFP-CFPLAKATKSAPN 65

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE +   I+    +      G  ++N +++P+     L++ V+SG  + + L+ +  K
Sbjct: 66  LIAETLAKSIQSQGIIQEAKNVGP-YLNFFINPAQTGSELTNEVLSGEFFTKELVSERPK 124

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             IE+   N    +HVGH R   +G+ L  +  ++  EV    Y  D+G  +      + 
Sbjct: 125 TMIEYSQPNTHKELHVGHMRNLCLGNALVRIKKYADQEVVAVTYPGDSGTHVAKCLWYLK 184

Query: 183 WRYQQALYNND-SDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEE------KWLPI 232
           +  ++++   D        Y    L     +G E   K   +L    +E      ++  +
Sbjct: 185 YHNKESIPETDKGPWLGSIYTKANLLLEDELGTEKEAKNREQLTAILKELENESGEYFDL 244

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            K+    + ++++++  K  +++ D +  E +      SP  ++   L  +G +      
Sbjct: 245 WKETRGWS-LEMMKEAYKWADVEFDRWFFESEV----DSPSLELAKKLYEEGKL------ 293

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
             K       +++  +L F            L+KSDG+  Y   D+A    K+E  G +N
Sbjct: 294 -VKDDGAIGMNLEEDKLGF----------CILIKSDGTGLYATKDVALAVKKFEEFGVEN 342

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            IY++ +  + + K++  V   +  ++A+    L        DG    MS R G+ + L+
Sbjct: 343 NIYIVDTRQAFHFKQVFKVLEHIGFEQAKNCHHLQYNFVELPDGA---MSSRKGNIVPLK 399

Query: 412 HVVDE----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
            ++++                            +   ++ + M    N+  + FD  +  
Sbjct: 400 DLINQMESHIANEYLSKYQDEWDKEEIAKTSSIIARGAINYGMTRFDNNRKIVFDMKEWL 459

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +   E    Y+QY YAR  S+  +      DL+ D               SEL L++ ++
Sbjct: 460 KLDGE-TGPYLQYVYARINSLCTKLG-YSSDLEADFSKLEK--------DSELALLIKIS 509

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +  ++           L  YL++L  +++  ++           +A    L   RL+L 
Sbjct: 510 AFNDIVIQCHEKNSATALCSYLFELGKLYNTFYAEC------PIAKAETETLKNARLKLS 563

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            +V+ ++  GL+++G+E+P  M
Sbjct: 564 KSVSLVMKQGLSLLGIEAPERM 585


>gi|149052278|gb|EDM04095.1| arginyl-tRNA synthetase (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 591

 Score =  318 bits (815), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 113/530 (21%), Positives = 219/530 (41%), Gaps = 73/530 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        K          +V+   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQELFG-CAIKAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L++++V+G++     +G+ 
Sbjct: 134 PREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLPV--LGEN 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + E +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++   +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFNKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + +  + + + + A A  +     ++  +      +       K   R+G+ + L  +++
Sbjct: 408 VDNGQATHFQTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLE 467

Query: 416 E-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           E                             V    +++  L         F F K+ +  
Sbjct: 468 EGLRRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKMLD-D 526

Query: 447 KENPVFYVQYAYARCR-SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           + N   Y+ YA+ R   SI R A     ++D ++  R     +  F   E
Sbjct: 527 RGNTAAYLLYAFTRISTSIARLA-----NIDEEMLQRAARETKDHFGPRE 571


>gi|19112869|ref|NP_596077.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           (predicted) [Schizosaccharomyces pombe 972h-]
 gi|23822212|sp|O74781|SYRC_SCHPO RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|3738212|emb|CAA21267.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           (predicted) [Schizosaccharomyces pombe]
          Length = 618

 Score =  318 bits (815), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 131/629 (20%), Positives = 225/629 (35%), Gaps = 102/629 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           ++Y+     KI      L    +E         L+     +    +   P  +A+     
Sbjct: 37  RSYISSELSKINGVDVSLIYPALETSISKDSADLNLPVPRL---RVKGKPQELAQKWAEA 93

Query: 72  IKIDPDVDSVFIAGKGFINLYLS---PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              D     V +   G I L  +   PS  + IL  I      YGRN  G G    IEF 
Sbjct: 94  FPKDL----VEVTANG-IFLRFNFNGPSLTKLILPIIWEQRENYGRNESGSGKVAVIEFS 148

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P H GH R  ++G  LA+L    G++V R  Y+ D G Q   LA+    +  + 
Sbjct: 149 SPNIAKPFHAGHLRSTIIGSFLANLHESQGWKVHRVNYLGDWGKQFGLLAIGYKKYGDED 208

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKE--------------------------LADKYSSEL 221
            L +N    P  +   VY+K                               L DK     
Sbjct: 209 QLKSN----PIRHLYDVYVKVNADATEEDEKIQKDKAEAESKGLPYTPPLSLHDKAREFF 264

Query: 222 LNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                 +E+ L +   +   ++ K+ +D    LNI +D +  E          +  ++D 
Sbjct: 265 KRMEDGDEESLKVWARFRDLSITKL-KDTYDRLNIHYDEYDGESQVS---LELMNKMVDE 320

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADL 338
           L     +                + D   LL   +     + + ++ K DG+  Y   D+
Sbjct: 321 LRSLNLI----------------EEDGGALLIDLSKHDKKLGKAIVQKRDGTTLYLTRDI 364

Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL------------- 384
                +YE+  FD  IYV+ S    Y  +L  +   +    A+  V              
Sbjct: 365 GTAYKRYEKYKFDKSIYVVSSQQDMYFSQLFKIFELMGFDWAKKCVHINYGLVQGMSTRK 424

Query: 385 -----LCELVRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLD 436
                L +++ + ++ M   M K    +        V D VG  ++R      K      
Sbjct: 425 GKAVFLDDIMEVAKEEMHKVMQKNEEKYAQVENPEEVADIVGKTAIRIQDSTGKRINNYA 484

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD+ ++    + +   Y+QYA++R  S+ R         D ++   N+   E   +    
Sbjct: 485 FDWSRMTSF-EGDTGPYLQYAHSRLSSVRRN----VNYTDEEIMGANL---ELLTEPDAY 536

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            L+  L +YP V++NA   QE   +  YL+ L       +        + +V+   R + 
Sbjct: 537 DLVRLLGQYPDVLKNAFRFQETSTVVTYLFKLTHAVSKLYD-------ILWVRGRERDIQ 589

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + RL L  A   ++N+G+ ++G+     M
Sbjct: 590 LARLALFGAAKQVLNNGMTLLGLTPLERM 618


>gi|169623233|ref|XP_001805024.1| hypothetical protein SNOG_14853 [Phaeosphaeria nodorum SN15]
 gi|111056585|gb|EAT77705.1| hypothetical protein SNOG_14853 [Phaeosphaeria nodorum SN15]
          Length = 749

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 134/672 (19%), Positives = 236/672 (35%), Gaps = 136/672 (20%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGL 59
           +  F  + S +   L  I     V+K ++ R  +       HG L     A+ L      
Sbjct: 127 LNPFDIYRSHITELLAPIS---GVDKAVIYR-SLSWTSKAEHGDLQLAVPALRL----KK 178

Query: 60  DP---LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRN 115
            P       + +  +    P V    +     +  + +   L + +L  ++ SG EYG N
Sbjct: 179 KPDEMKAFTQELADKFPESPLVKKPLVTNTS-LGFFFNAEPLTQLVLPMVLKSGAEYGFN 237

Query: 116 ----------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
                           K+ +EF S N   P H GH R  ++G  LA+L   +G++V R  
Sbjct: 238 RNLGLRNPEDPAQGKKKMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYEGAGWDVVRMN 297

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELL 222
           Y+ D G Q   LA+         L+ N+ +L   P G+   +Y+K    +  +    + L
Sbjct: 298 YLGDWGKQYGVLAIGF------DLFGNEEELVKNPIGHLYDIYVKVSTIQHEEAEQVKAL 351

Query: 223 NFPEEKWLPIVKDYSVQA-------------------------------MMKIIRD---- 247
                K     KD S Q                                + K  RD    
Sbjct: 352 KAEAAKLKEEGKDASEQEAKITKIETEGIDEQARKYFKGMVDGEPKALGIWKRFRDLSIE 411

Query: 248 ----DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
                   LNI++D +  E          ++D    LA +  ++E           + C+
Sbjct: 412 KYKATYARLNIRYDDYSGESQ--------VKDESMELAAK-IMWE----------KKVCE 452

Query: 304 MDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
                ++   T     + + ++ K DG+  Y   D+     + E+  FD+MIYV+ S   
Sbjct: 453 DSEGAVIVDLTKHSKKLGKAVVKKKDGTSLYLTRDIGEAIQRVEKYHFDHMIYVVASQQD 512

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---- 417
            ++ +L  +   +          +         GM + MS R G    L  ++ +V    
Sbjct: 513 LHLAQLFKIEELMGRTD------ISSRCTHINFGMVLGMSTRKGTAKFLDDILRDVGEKM 566

Query: 418 ------------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                   G  +V    +  K      FD  ++    + +   Y
Sbjct: 567 HDVMRSNQAKYEQVENPDQVADTLGISAVMVQDMKGKRINNYTFDMDRMTSF-EGDTGPY 625

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYA+AR  SI+R+A    P L+        +      +   + L+  LA +P    N  
Sbjct: 626 LQYAHARLCSIYRKALAADPSLEKVDLASADLNL--LTEPHAIDLVRQLASWPDTFLNTI 683

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             QEP  +  YL+ +A      + H      L+ V    R + + RL L  A   ++++G
Sbjct: 684 KTQEPTTVLTYLFKMAHALSSSYDH------LQVVGTKERGVMLARLALYVAARQVLSNG 737

Query: 574 LNIIGVESPNEM 585
           + ++G+     M
Sbjct: 738 MRVLGLSPVERM 749


>gi|203284498|ref|YP_002222238.1| arginyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690568|sp|B5RME6|SYR_BORDL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|201083941|gb|ACH93532.1| arginyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 585

 Score =  318 bits (814), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 126/619 (20%), Positives = 249/619 (40%), Gaps = 74/619 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + AD  ++++  +KE+     ++   ++ IV+++P     G LS       S+ L L   
Sbjct: 5   IKADLKNKIQKTIKELALSSNIKLDKIN-IVMQKPPKSEMGDLSI-LIFEFSKILKLSIP 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121
            I + I+ +I  +    S+   G  ++N+  +   Y++  +  +      YG N   +  
Sbjct: 63  VITQEIIKQIGNEYKTKSM---GP-YLNIKFNRKEYIQNTIKKVNKEKENYGANNSLQNK 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  IEF S N   P+HVGH R  ++G++L+ ++  SG +VT+   IND G  I    L+ 
Sbjct: 119 KTIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGSKVTKINLINDRGTHICKSMLA- 177

Query: 182 FWRYQQALYNNDSDLPEGYYPGV-YLKHVGK-----ELADKYSSELLNFPEEKWLPIVKD 235
           + ++   +    +     +  G  Y+K+        E+A+    +LL   E+     V+ 
Sbjct: 178 YKKFGNNITPEIAQKKGDHLIGDFYVKYNEYASQNSEIAENEIQQLLCQWEQGDEKTVQL 237

Query: 236 YSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++      I  I++     NI  D    E +  +      R+++ N  ++G  Y+     
Sbjct: 238 WTKLNKWAIDGIKETYNTTNITFDKIYLESEIFKIG----REVVINGLKEGLCYKREDGA 293

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF-KCKYERGFDNM 352
                  + +    Q             + LL+++G+  Y   DL      K E  FD M
Sbjct: 294 ICINIPTEKNNIDNQNF---------KQKVLLRANGTSIYLTQDLGNIVARKNEFDFDEM 344

Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IYV+GS+   + K L  VA  +    +  +  L   +V L       KM  R G+ I   
Sbjct: 345 IYVVGSEQIHHFKTLFYVADKLGVTNENNLIHLSYGMVNLPEG----KMKSREGNIIDAD 400

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ +                         +   ++ + +L     + + F+  +    +
Sbjct: 401 NLIHDLSQSTMLELKKRYENEQNLQKLALNISLGAIHYYLLKTAIHKDILFNKTESLSFT 460

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QY  AR  SI  +  ++                +   + +E ++I  ++E+ 
Sbjct: 461 -GNSGPYIQYVGARINSILDKYNNLN-------LANKNTNFDLLVNENEWEIIKIISEFE 512

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I  A+  + P  +A Y Y LA  F  ++         + +  +N +LT  R+ L  AV
Sbjct: 513 EYIIKASKDRNPSIIANYSYLLAKNFSTYYQD------TKIIDKDNLELTHARIDLAKAV 566

Query: 567 ASIINSGLNIIGVESPNEM 585
              I + ++++ +    +M
Sbjct: 567 LQTIKNCMHLLNIPYIQKM 585


>gi|328773748|gb|EGF83785.1| hypothetical protein BATDEDRAFT_84510 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 780

 Score =  318 bits (814), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 127/612 (20%), Positives = 236/612 (38%), Gaps = 85/612 (13%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           + +++I     V + +L   ++E PRD A+G +S    +  +R  G+ P  +A  +  + 
Sbjct: 215 SIVEQIHSLTGVAEDLLYS-LLEEPRDKANGDMSLP--LPRTRLPGI-PTQLAASLAKQF 270

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSAN 131
           + +  +      G  F+N   + + L K + S  V  G  YG N  G G    +EF S N
Sbjct: 271 QPNNLILKAVATGP-FLNFTFNKAILSKKVISSAVTLGTSYGSNSDGFGKFAVVEFSSPN 329

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALY 190
              P H GH R  ++G  L +++  SG+      Y+ D G Q   LA+    +   +AL 
Sbjct: 330 IAKPFHAGHLRSTIIGSFLKNVLDVSGWSTVSINYLGDWGKQFGLLAVGFDRYGSDEALS 389

Query: 191 NNDSDLPEGYYPGVYLKHVGKELAD--------KYSSELLNFPEEKWLPIVKDYSVQAMM 242
            +    P  +   VY++   + + D         Y  ++ +  E  +  + K +   +++
Sbjct: 390 TD----PIRHLYDVYVRINTEAIEDASIHDQARAYFKKMEDGDEHAYN-LWKRFRDLSIV 444

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  ++    LN+  DI+  E  +     S +R +++ L   G +          +     
Sbjct: 445 KY-KEVYGRLNVHFDIYSGESQYS---LSQMRSVMNELQNVGLL-------VPDQGALIV 493

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           D+   +L              + K+DGS  Y + D+A    + +   FD+M YV+G+   
Sbjct: 494 DLKEYKLGVA----------VIGKTDGSLLYLSRDIAAACDRKDTFDFDHMFYVVGTQQD 543

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
            + K+L  +     +        +   +   +DG    MS R G  + L  ++       
Sbjct: 544 HHFKQLFKILELQGKTWVDRCSHIGFGLIKSKDGN---MSTRRGTVVFLEDILNTVRDEM 600

Query: 415 ---------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                D VG  +     +  + ++   FD+ ++    + +   Y
Sbjct: 601 HANMKKNEHKYAQVVDPERVADIVGQSATMIQDMGARRAKDYTFDWSRI-FSFEGDTGPY 659

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYA++R  SI RQ++     L         I      +   L LI  +A YP VI + +
Sbjct: 660 LQYAHSRLCSIERQSE----HLQVSADTLLDIDLTLLVEPQALALIEAIALYPDVIRDLS 715

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  L  Y   L+               + +V    + L   RL L  A    +++ 
Sbjct: 716 KNYEPCNLVSYSLRLSHAISS-------AIDVLWVSGQEKPLAHARLALYVAARFALSNA 768

Query: 574 LNIIGVESPNEM 585
           L  +G+     M
Sbjct: 769 LRTLGLTPLTRM 780


>gi|289617811|emb|CBI55676.1| unnamed protein product [Sordaria macrospora]
          Length = 698

 Score =  317 bits (813), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 120/612 (19%), Positives = 226/612 (36%), Gaps = 71/612 (11%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L   + + L N L E+          L    +        G ++        R  G  
Sbjct: 121 LNLMDLYRAHLSNVLSEVTGV----DTSLIYPNLGWTSGLEKGDMALPV--PALRVKGKK 174

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE   A+      + S     +  ++ ++  S L   +  +V     + +      
Sbjct: 175 PNELAEEWAAKFPDTDPLFSKPTVSQVHLSFFIKASPLVNAVIPLV-----HAKGADKGQ 229

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +EF S N   P H GH R  ++G  L++L A +G++V R  Y+ D    IN L   
Sbjct: 230 KRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWDVIRINYLGDWEDPINHL-FQ 288

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVG----KELADKYSSELLNFPEEKWLPIVKDY 236
           ++ R    +     +  +    G  +  +      E A +Y  ++ +   +  L + K +
Sbjct: 289 LYVRINTEMTAEKEEFTKRKEAGEDVSALEANSLDEQARRYFKKMTDRDADA-LAMWKRF 347

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++++  +D    LNI  D +  E               D +   G + E      + 
Sbjct: 348 RDLSIVRY-KDTYARLNIHFDEYSGESQV----------TEDAMNEVGKLMEDKKICKED 396

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-GFDNMIY 354
           K  Q  D             G  +++PL++  DG+  Y   D++    ++E+  FD MIY
Sbjct: 397 KGAQLIDFSE----LIPGKEGKRLEKPLVRKRDGTALYLTRDISELLGRHEKYHFDKMIY 452

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKK--AQINV-----------------LLCELVRLYRDG 395
           V+ S    ++++L  +   +  K    +                     L +++R   D 
Sbjct: 453 VVASAQDLHLRQLFKIIELLGYKDIADKCQHINFGLVLGMSTRKGTVKFLDDILRDVADK 512

Query: 396 MPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           M   M K    +  +       D +G  SV    +  K      F+   +    + +   
Sbjct: 513 MHEVMKKNENKYSQIEDPLATADVLGISSVMVQDMSGKRINNYTFNMETMTSF-EGDTGP 571

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QYA+AR  SI R+A     +L                +TS + L  H+A +P V++N 
Sbjct: 572 YLQYAHARLNSIRRKAGVSDEEL-------ATADLSLLTETSAINLCRHMAGWPDVVKNT 624

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               EP  +  YL+ L       +   +       V  +  +L   RL L  AV +++ +
Sbjct: 625 LKTLEPTTVLTYLFKLTHALSSSYDQLQ-------VVGSEPELMKARLALYTAVQTVLAN 677

Query: 573 GLNIIGVESPNE 584
           G+ +IG+     
Sbjct: 678 GMRLIGLSPVER 689


>gi|305665103|ref|YP_003861390.1| arginyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88709855|gb|EAR02087.1| arginyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 595

 Score =  317 bits (813), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 124/641 (19%), Positives = 241/641 (37%), Gaps = 102/641 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    ++++K  +  +       K  L  +  +  R    G + T     + R +  +
Sbjct: 1   MSIQEILTTKVKEAISTVY------KVDLPTVEFQPTRKDFEGDI-TVVVFPMLRFVKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +   I   +    +  S F   KGF+N+ +S S+  +   SI        R   GK 
Sbjct: 54  PAVLGNQIGEYLMEHVEDVSGFNVVKGFLNIVISDSHYIEFFKSIKKIKNFGYRANAGK- 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  +G +V +   IND G  I    L+
Sbjct: 113 EAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGKKVYKTQIINDRGIHICKSMLA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIV--- 233
            + ++ +     ++ L      G Y     K    E+ +  S  +     EK  PI+   
Sbjct: 173 -WQKFGKGETPQNTGLKGDKLVGNYYVAFDKAYKAEIEEMVSKGVEKKQAEKEAPILLEA 231

Query: 234 ----------KDYSVQAMM-------KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                      D  V           K   +  K L +  D    E D +       +D+
Sbjct: 232 QSMLRKWEASDDEVVGLWKTMNGWVYKGFDETYKNLGVDFDKLYYESDTYLLG----KDV 287

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           + +   +G  Y+                +   +    T  G D ++ +L+SDG+  Y   
Sbjct: 288 VASGLEKGVFYKK---------------EDGSVWIDLTDEGLD-EKIVLRSDGTAVYMTQ 331

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYR 393
           D+     + +   D   M+Y +G++   + K L  +   +    A +++ L   +V L  
Sbjct: 332 DIGTAIQRVKDYSDITGMVYTVGNEQDYHFKVLFLILKKLGFTWAERLHHLSYGMVDLPS 391

Query: 394 DGMPIKMSKRAGDFITLRHVV-----------------------------DEVGSDSVRF 424
                KM  R G  +    ++                               +G  ++++
Sbjct: 392 G----KMKSREGTVVDADDLMIDMSETAAKISEELGKLDDYSVTEKQGLFKMIGLGALKY 447

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + FD  +  +  + N   ++QY YAR +SI R+  +I    D ++ P   
Sbjct: 448 YILKVDPKKRILFDPEESVDF-QGNTGPFIQYTYARIQSILRKGDEIANVWDSEVEPA-- 504

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                E  + E +L+  +  +P  I+ A     P  +A Y YDL   F+  +       +
Sbjct: 505 ----MELHSKEKELLKQVQAFPETIQLAAENYSPALIANYTYDLVKEFNSFYQ------Q 554

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +  +  +  + R+QL   V  +I S   ++G++ P  M
Sbjct: 555 VSILGESVEQKKVFRVQLSKKVGEVIQSAFLLLGIQVPERM 595


>gi|222478607|ref|YP_002564844.1| arginyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|254782966|sp|B9LRF1|SYR_HALLT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222451509|gb|ACM55774.1| arginyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 602

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 139/640 (21%), Positives = 254/640 (39%), Gaps = 95/640 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  F S + + L +    + +     D + IERP D     L+++ A  L+  +G  P 
Sbjct: 1   MFRQFRSEVADALGDALASLDLPT---DDLGIERPPDDMDATLASSVAFRLAGEVGDAPP 57

Query: 63  TIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  +   + +D      +V  AG  ++N +    Y    L +  V        L  + 
Sbjct: 58  NVAATVADAVDVDGYDYLAAVDTAGP-YVNFHPGERYFVDTLDASAVD--SGYGALPDRD 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T V +E  SANPTGP+HVG  R  +VGD +A+L+ ++GY+V R YY+NDAG Q+     +
Sbjct: 115 TSVVVEHTSANPTGPVHVGRARNPIVGDAVANLLEYAGYDVDRHYYVNDAGRQMAVFTWA 174

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------------LNFPE 226
            + R+ ++    +       Y  V     G    ++   E               L   +
Sbjct: 175 -YERFDESDLAGEPARARAEYDLVRYYRKGNAYLEEADPEAVEAAEEEIAAILQGLEAGD 233

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E+    V +  V  ++  +++ L  L  + D F+ E  F R       DI   L      
Sbjct: 234 EETYERVGEV-VDTVLGGMKECLARLPAEFDEFVKETRFMR--DGSTDDIAARLKE---- 286

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
                       T     +           G D +   L+SD +  Y   DLA+ + K++
Sbjct: 287 ------------TDHAVYEEDAWQLELDDWGIDKNLVFLRSDDTSLYTTRDLAHHEWKFD 334

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +D  + V+G DH     +L+A    +     ++  ++   V L       KMS R G 
Sbjct: 335 -NYDRAVTVLGEDHKLQADQLDATLELLGNDIDRLGHVIYSYVNLPDG----KMSTRRGT 389

Query: 407 FITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSE 433
            + L  ++DE                                 VG  +VR+ ++ ++ ++
Sbjct: 390 GVMLDDLLDEAIDRAREAVETRMDDRIRDDDLTEEDVERIAHEVGIGAVRYDIVSKQPAK 449

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD- 492
            + F++    +   ++   +VQY +ARC  I  +A D   ++         +      D 
Sbjct: 450 AITFEWEDALDFEGQS-APFVQYVHARCCGILDEAADAGIEVPGVTADSEGVVDVGALDV 508

Query: 493 -------TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                   +   L+  +A +P  IE+A    EP+ +A +  + A  ++  +         
Sbjct: 509 DATVFETDAARDLLREVARFPAAIESAADDLEPHTIATFTREFADAYNAFYREC------ 562

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V +++ +L   R+ LV A    + + L+++GVE+P  M
Sbjct: 563 PVVTSDDEELRAARVALVAAAKHTMANALDVLGVEAPESM 602


>gi|307610758|emb|CBX00369.1| arginine tRNA synthetase [Legionella pneumophila 130b]
          Length = 280

 Score =  317 bits (812), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 109/306 (35%), Positives = 178/306 (58%), Gaps = 26/306 (8%)

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           +  +G+ YE                    L FR+T  GD+ DR L++++G  TYFA+D+A
Sbjct: 1   MKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVA 44

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y   KY+RGFD +I + G+DH GYV R++    A+   ++ ++V+L +   LYR G  ++
Sbjct: 45  YHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQ 104

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MS R+G F+TLR + +EVG+D+ R+  + RK  + +DFD    K +S +NPV+Y+QYA+A
Sbjct: 105 MSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHA 164

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  S+ RQ K+     D D+  +N+   E +    E  LI  +A YP VI++A  + EP+
Sbjct: 165 RICSVLRQLKERSLKWDKDMGLKNLDLLEQQ---HETTLISLIARYPEVIQSAAASCEPH 221

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +LA+YL +LA+  H +++  +       +     +L   RL L+ +V  ++N+GL I+GV
Sbjct: 222 QLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGV 274

Query: 580 ESPNEM 585
            +P  M
Sbjct: 275 SAPESM 280


>gi|315224424|ref|ZP_07866254.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945627|gb|EFS97646.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 631

 Score =  317 bits (812), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 115/642 (17%), Positives = 236/642 (36%), Gaps = 103/642 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L       +   ++E+          L+ + +++ +    G + T     L R +  +
Sbjct: 36  LNLNDTLKQHILQAVQELY------GVSLESVELQQTKKEFVGDV-TLVVFPLLRHIKGN 88

Query: 61  PLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P+ I E I   +K    D+ + F   KGF+NL ++ SY    L   V +  ++G      
Sbjct: 89  PVQIGEQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKE-VKNNPQFGLATPNS 147

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G  I   ++
Sbjct: 148 KEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRGIHICK-SM 206

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------Y 217
             + R+       ++ L      G Y     K    +                       
Sbjct: 207 VAWQRFGNGETPENTGLKGDKLVGNYYVAFDKAYKAEIQQLVEQGKTKEEAEKQAPIFVA 266

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           + E+L   E     ++K +               K L +  D +  E + +       +D
Sbjct: 267 AQEMLRQWEAGNPEVIKLWKQMNGWVYDGFAVTYKNLGVDFDSYYYESNTYLLG----KD 322

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           I++    QG  ++                +   +    T  G D ++ +L++DG+  Y  
Sbjct: 323 IVERGLEQGVFFKK---------------EDGSVWCDLTADGLD-EKLVLRADGTSVYMT 366

Query: 336 ADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLY 392
            D+     + +   D   M+Y +G++   + K L  +   +    A  +  L   +V L 
Sbjct: 367 QDMGTATQRVKDYPDVKGMVYTVGNEQDYHFKVLFLILKKLGYDWASHLYHLSYGMVDLP 426

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
                 KM  R G  +    ++ E                             +G  +++
Sbjct: 427 SG----KMKSREGTVVDADDLIAEMEQTAKEISQELGKLDDYTEAQKEALYHTIGLGALK 482

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + FD  K     + N   ++QY YAR +SI R+  ++    +  +   N
Sbjct: 483 YYILKVDPKKRILFDP-KESIDFQGNTGPFIQYTYARIQSIMRKYTEMGGRNEAAIEKVN 541

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +         E  L+  +  +P V+++A  +  P  +A Y+YDL   F+  + +     
Sbjct: 542 GL------HEKEKALLKSITLFPSVVQDAADSYSPAIIANYVYDLVKDFNSFYQN----- 590

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  +          R+ L   +  II     ++G++ P  M
Sbjct: 591 -VSILGEEEESKRDFRVMLSKKIGEIIAESFKMLGIQVPERM 631


>gi|332880010|ref|ZP_08447694.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682006|gb|EGJ54919.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 595

 Score =  317 bits (812), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 118/636 (18%), Positives = 231/636 (36%), Gaps = 101/636 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               LK ++ ++  +  +    L+ + +++ R    G + T     L R +  +P+ I E
Sbjct: 4   LQDTLKQHITQVVQQ--LYSVDLETVELQQTRKDFTGDI-TLVIFPLLRHIKGNPVQIGE 60

Query: 67  LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
            I   +K       S F   KGF+NL ++ SY    L  I  +   +G         + +
Sbjct: 61  QIGDYLKKHAGNLVSDFNVIKGFLNLVIADSYYIDFLDQIRENK-HFGLAAPNSKEAILV 119

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G  I    ++ + R+
Sbjct: 120 EYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRGIHICKSMIA-WQRF 178

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGK----------------ELADKYSSELLNFPEEKW 229
                     L      G Y     K                E A+K +   +   E   
Sbjct: 179 GNGETPESIGLKGDKLVGNYYVAFDKAYKEEIQQLIAEGKSKEEAEKQAPIFVAAQEMLR 238

Query: 230 LPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                D  V ++ K +            K L +  D +  E + +       +DI++   
Sbjct: 239 QWEAGDPEVISLWKKMNGWVYDGFAVTYKNLGVDFDSYYYESNTYLLG----KDIVERGL 294

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            QG  ++                +   +    T  G D ++ +L++DG+  Y   D+   
Sbjct: 295 AQGVFFKK---------------EDGSVWCDLTADGLD-EKLVLRADGTSVYITQDMGTA 338

Query: 342 KCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPI 398
             + +   D   M+Y +G++   + K L  +   +    A  +  L   +V L       
Sbjct: 339 TQRVKDYPDVKGMVYTVGNEQDYHFKVLFLILKKLGYDWASHLYHLSYGMVDLPSG---- 394

Query: 399 KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWR 429
           KM  R G  +    ++ E                             +G  ++++ +L  
Sbjct: 395 KMKSREGTVVDADDLIAEMEQTAKEISQELGKLDGYTEAQKEALYHTIGLGALKYYILKV 454

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + + FD  K     + N   +VQY YAR +SI R+  ++           +      
Sbjct: 455 DPKKRILFDP-KESIDFQGNTGPFVQYTYARIQSILRKYAEMGV--------ADSTAMPD 505

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                E  L+  +  +P +++ A     P  +A Y+YDL   F+  + +      +  + 
Sbjct: 506 TLHEKEKALLKSITLFPAIVQEAAEEYSPAVIANYVYDLVKDFNSFYQN------VSILG 559

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    R+ L   +  II +   ++G++ P  M
Sbjct: 560 EKEPVKLHFRVVLCEKIGEIIAASFKMLGIQVPERM 595


>gi|116515092|ref|YP_802721.1| hypothetical protein BCc_152 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285512|sp|Q057S1|SYR_BUCCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116256946|gb|ABJ90628.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 571

 Score =  316 bits (811), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 111/589 (18%), Positives = 233/589 (39%), Gaps = 80/589 (13%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           +I++     +     N  + L +        +A+ I   +        + I+  GFIN+ 
Sbjct: 27  IIQKNIKKKNIDYQINGIIKLKKKKSNYHYKLAKKISYYMNKSKIYKKISISKPGFINIT 86

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  +++   ++++ ++          K  K+ I++ S N    MHVGH R  ++GDT A 
Sbjct: 87  LDSNWICTNINNMFIAKNFN--ISFKKPKKIIIDYSSPNIAKEMHVGHLRSTILGDTTAR 144

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           ++ F G+ V ++ +I D G Q   L   +    + +  N      E  Y   YL +    
Sbjct: 145 ILKFLGHNVIKQNHIGDWGIQFGMLITQLKLESKISFKNI-----EKIYKKSYLNY---- 195

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN-----IQHDIFISEDDFHR 267
                          K  PI    + + ++K+ + D K +      ++  I  +   + +
Sbjct: 196 ---------------KKNPIFFKKTKKNVVKLQKKDKKCIYIWKKIVKKSIKKNNKVYKK 240

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--TMVGDDVDRPLL 325
            + S  +  I   +   ++  GI+   K K           +  ++    +G  +   + 
Sbjct: 241 LNVSLKKKDIRGESFYNFMLPGIISDLKKKKIAVNYQGCVIVYLKNFKNRLGKKMGVVIQ 300

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           K DG++ Y   D+A  K + +    D +IY + +    ++ ++  +A        +I + 
Sbjct: 301 KKDGAFLYTTTDIACLKYRCKTLKADRIIYYIDNRQKQHLLQIWNIAKKAKYFTKKILLE 360

Query: 385 LCELVR-LYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
                  L+++  P K   R GD I L  ++++                           
Sbjct: 361 HHSFGMILHKNKKPFK--TRNGDTIKLIKLLNKGVTKAKEKIKKKNRKIKKKELKKIAHN 418

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G  ++++  L +K      FD+ K+    + N   Y+QYAY R +SI ++   IF +  
Sbjct: 419 IGIGAIKYFDLSKKRKLDYIFDWDKMLSL-EGNTAPYIQYAYIRIKSIIKKNTTIFQNDK 477

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           + +         + F + E QLI  + ++  +I        P+ +  YLYDL+  F   +
Sbjct: 478 YKI---------NIFTSFERQLIFSIFQFEEIIHILEKKGTPHLMCNYLYDLSGKFSKFY 528

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +         + A  + + + R++L    + II   L  +G+++ ++M
Sbjct: 529 ENC------SILNAKEKHIKISRIKLSILTSKIIKKCLYFLGIKTVSKM 571


>gi|329925160|ref|ZP_08280103.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939993|gb|EGG36326.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 620

 Score =  316 bits (811), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 129/650 (19%), Positives = 236/650 (36%), Gaps = 98/650 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L     S L+  + ++      +      I IE+P    HG  +TN AM L++ L   PL
Sbjct: 2   LSQKIISSLQQAVNQVCEAYGTKLPESTPIRIEQPASMEHGDYATNVAMQLAKVLRKAPL 61

Query: 63  TIAELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IAELI A ++ D        S  I   GF+NL +   Y       +             
Sbjct: 62  QIAELIQAELEQDASYKQLVRSTEIVAPGFMNLRIDWEYWASHHFEL----------PPA 111

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ IE  S NP    H+GH R + +GDTL  LM   GYEV    YI+D G Q+    
Sbjct: 112 ANEKIVIEHTSINPNKSAHIGHLRNSCIGDTLVRLMRKLGYEVEVHNYIDDLGNQLADTV 171

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDY 236
           + +        +    D     Y      +  +    ++ +E+L+  EE  + L  +   
Sbjct: 172 VGLLHTPLTKEHARFGDYCWDVYSSTNKAYEREPGLVEHRTEVLHALEEGNQNLSWIGLL 231

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             + ++K   +++K   I++D+ + E    +          + L      ++      + 
Sbjct: 232 VAERIVKEHLEEMKQFGIEYDLLVWESSIVK--EGFWASAFELLKNTPLFHQ----ETEG 285

Query: 297 KTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKY---------- 345
           K      + +           D  +D+ L++S+G  TY A D+AY   KY          
Sbjct: 286 KLAGCWVLKQSGTEAGDEAESDHSIDKVLVRSNGILTYTAKDIAYHLWKYGVLSNDFVYK 345

Query: 346 --------------ER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLC 386
                         ER     D +I V+          ++     +    +  ++  +  
Sbjct: 346 KFTDEVWTTSSHAEERTYGKADMVINVIDYRQQYPQAMVKQALEGLGFQQEAEKLRHVSY 405

Query: 387 ELVRL------------YRDGMPIKMSKRAGDFITLRHVVDEVGS--------------- 419
            +V L                    MS R G  I +  ++ +V                 
Sbjct: 406 GVVSLSPSAAADLGIDTSDGKASYAMSGRQGIGIKITELIHQVAKVIEDTRSDKNGLSSH 465

Query: 420 ----DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
                S+R+ +L       + FD  +  E S  N   Y+ Y+YAR  S+  +A++     
Sbjct: 466 AIATASIRYYLLRFALQTEVVFDLKQATEIS-GNTGVYLLYSYARALSVLNKAQEAE--- 521

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                  +V  +    + +E  L+ H++ +   +  A     P  +  + Y+L S+F+  
Sbjct: 522 ----VTPSVPSRFPAMEKAEHALLRHISTWHDTLYAAGRDLSPSAICNFTYELCSLFNNF 577

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +S          ++A   ++   R+ L     + +   L ++G+ +P+ M
Sbjct: 578 YSAC------PILKAE-EEVLQFRVWLTSLFKNTLGEALEVLGLPTPSRM 620


>gi|256819031|ref|YP_003140310.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580614|gb|ACU91749.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 597

 Score =  316 bits (811), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 119/637 (18%), Positives = 240/637 (37%), Gaps = 99/637 (15%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + +  LK Y+  +    ++    L+ + +++ +    G + T     L R +  +P+ I 
Sbjct: 3   NLNDTLKQYI--LQAVQELYGVSLESVELQQTKKEFVGDV-TLVVFPLLRHIKGNPVQIG 59

Query: 66  ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           E I   +K    D+ + F   KGF+NL ++ SY    L   V +  ++G         + 
Sbjct: 60  EQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKE-VKNNPQFGLATPNSKEAIL 118

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E+ S N   P+H+GH R  ++G ++A ++  +G++V +   IND G  I   ++  + R
Sbjct: 119 VEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRGIHICK-SMVAWQR 177

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGK----------------ELADK------YSSELL 222
           +       ++ L      G Y     K                E A+K       + E+L
Sbjct: 178 FGNGETPENTGLKGDKLVGNYYVAFDKVYKAEIQQLVEQGKTKEEAEKQAPIFVAAQEML 237

Query: 223 NFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
              E     ++K +               K L +  D +  E + +       +DI++  
Sbjct: 238 RQWEAGNPEVIKLWKQMNGWVYDGFAVTYKNLGVDFDSYYYESNTYLLG----KDIVERG 293

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             QG  ++                +   +    T  G D ++ +L++DG+  Y   D+  
Sbjct: 294 LEQGVFFKK---------------EDGSVWCDLTADGLD-EKLVLRADGTSVYMTQDMGT 337

Query: 341 FKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMP 397
              + +   D   M+Y +G++   + K L  +   +    A  +  L   +V L      
Sbjct: 338 ATQRVKDYPDVKGMVYTVGNEQDYHFKVLFLILKKLGYDWASHLYHLSYGMVDLPSG--- 394

Query: 398 IKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLW 428
            KM  R G  +    ++ E                             +G  ++++ +L 
Sbjct: 395 -KMKSREGTVVDADDLIAEMEQTAKEISQELGKLDGYTEAQKEALYHTIGLGALKYYILK 453

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               + + FD  K     + N   ++QY YAR +SI R+  ++             + + 
Sbjct: 454 VDPKKRILFDP-KESIDFQGNTGPFIQYTYARIQSIMRKYAEMGGR------NEAAVEKV 506

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           S     E  L+  +  +P V+++A  +  P  +A Y+YDL   F+  + +      +  +
Sbjct: 507 SGLHEKEKALLKSITLFPSVVQDAADSYSPAIIANYVYDLVKDFNSFYQN------VSIL 560

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     R+ L   +  II     ++G++ P  M
Sbjct: 561 GEEEESKRDFRVMLSKKIGEIIAESFKMLGIQVPERM 597


>gi|42523502|ref|NP_968882.1| hypothetical protein Bd2027 [Bdellovibrio bacteriovorus HD100]
 gi|81617243|sp|Q6MLI2|SYR_BDEBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|39575708|emb|CAE79875.1| argS [Bdellovibrio bacteriovorus HD100]
          Length = 580

 Score =  316 bits (811), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 122/612 (19%), Positives = 232/612 (37%), Gaps = 79/612 (12%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
           + LK+ +          +  + + ++  P+    G L+     IL++ L   P  +A  +
Sbjct: 13  NLLKDAIGRAYPDFSASEDDIYKALVNPPK-SDLGDLAF-GCFILAKALKTAPPQVATAV 70

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            A++K      +   AG  +IN+        + + + ++ G  + + L+ K  K  IE+ 
Sbjct: 71  AAQMKG----ATAVAAGP-YINIRFDEQTHGEQVLATILDGSYFKKPLMEKSPKTMIEYS 125

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
             N    +HVGH R   +GD +  ++ +SG E+    +  D G  +      +       
Sbjct: 126 QPNTHKELHVGHMRNLCLGDAIVRMLRYSGREIVSSTFPGDMGTHVAKCLWYMK------ 179

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             +N   +PE           G+ L   YS   L   ++   P  +D + Q +  I+   
Sbjct: 180 -KHNQEPVPE--------TEKGEWLGRMYSKANLLLEDQNGTPQ-EDINRQELTAILHQL 229

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                  +D+++   ++       +    D    + Y +E  +  P +   ++   +  +
Sbjct: 230 EGKTGPYYDLWLETREWSIELMKKVYAWADVTFDEWY-FESEMDSPSAAWVKQLYAE-GK 287

Query: 309 LLFRSTMVGDDVDR------PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           L      +G D++        LLKSDG+  Y   DL   K K+E    +  +YV+    +
Sbjct: 288 LEMSQGAIGKDLESEKLGFCMLLKSDGTGLYATKDLLLAKHKFEDVKIEKSVYVVDMRQA 347

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------ 415
            + K++  V   +  ++A+    L        DG    MS R G+ + LR +V       
Sbjct: 348 LHFKQVFRVLEILGFEQAKNCFHLQYNYVELPDGA---MSSRKGNIVPLRELVHRMEDHV 404

Query: 416 ----------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                 +V   ++ + ML    ++ + FD  +  +   E+   +
Sbjct: 405 KTTYLSRYKGEWSEEDVEKIAGQVAKGAIFYGMLRMDTNKKIVFDMNEWLKLDGES-GPF 463

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           VQY+YAR  S+ R+         F       I        SE QL+  L  +   +  A 
Sbjct: 464 VQYSYARISSLGRK---------FPRTAGAKIDWSRLNHASERQLMQSLGGFNTAVAAAA 514

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +P  +  YLYDLA  F+  +               +      RL L  AV   + +G
Sbjct: 515 ENFKPSAICTYLYDLAKSFNVFYHEC------PIGTEADVATREARLALSEAVGLTLKNG 568

Query: 574 LNIIGVESPNEM 585
           L ++G+ +P +M
Sbjct: 569 LAVLGMPAPEKM 580


>gi|39956339|ref|XP_364235.1| hypothetical protein MGG_09080 [Magnaporthe oryzae 70-15]
 gi|145016471|gb|EDK00901.1| hypothetical protein MGG_09080 [Magnaporthe oryzae 70-15]
          Length = 639

 Score =  316 bits (811), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 123/641 (19%), Positives = 228/641 (35%), Gaps = 108/641 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           + +L  I   I      +    ++       G L   AA  L R  G  P  + +    +
Sbjct: 40  RAHLTNILQPITGVDPKIIYPAVQWTSSLDKGDL-VVAAPAL-RVKGKKPDELVKEWSEK 97

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGKG 120
              D  +    +    F+  +  P  L + L  ++             G++  ++     
Sbjct: 98  FPTDDPLFEKPVVTGYFLQFWFKPDPLTRNLIPLIRELGDDYGNNKRLGLKDPQDPSKGN 157

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+ D G Q   LAL+
Sbjct: 158 KKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYKGAGWDVQRINYLGDWGKQYGLLALA 217

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVYLK--------HVGKELADKYSSELLNFP----EE 227
              +  ++AL  +    P  +   +Y+K            E   K   ++        +E
Sbjct: 218 FERYGDEEALKKD----PINHLFQLYVKINSEMSEEKEQIESKKKAGEDVTQLEQKSLDE 273

Query: 228 KWLPIVK-----DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIR 274
           +     K     D +  A  +  RD            LNI  D +  E            
Sbjct: 274 QARAYFKKMVDGDEAAVAQWRRFRDLSIERYKKTYARLNIWFDEYSGESQV--------- 324

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTY 333
              +++A+            + +     D             G  ++RP+++  DG+  Y
Sbjct: 325 -TEESMAKSAKTIADKGISKEDQGAVIIDFSEHV----PGKEGKRLERPIIRKRDGTALY 379

Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D++    ++ER  FD MIYV+ S    ++K+L  +   +  K+      + +  +  
Sbjct: 380 LTRDISELLGRHERYNFDKMIYVVASQQDLHLKQLFKIVELMGHKE------IADKCQHI 433

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEV----------------------------GSDSVRF 424
             GM + MS R G    L  ++ +V                            G  SV  
Sbjct: 434 NFGMVLGMSTRKGTVKFLDDILRDVGDKMHEVMRKNDDKYSQVENPEAVADILGISSVMV 493

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             +  K      FD   +    + +   Y+QYA+AR  SI R+A     +L         
Sbjct: 494 QDMTGKRINNYTFDMDAMTSF-EGDTGPYLQYAHARVCSIARKAGLTPEEL-------AT 545

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
                  +    QL+  L+++P  ++N     EP  +  YL+ ++      + H R    
Sbjct: 546 ADLSLLQEPHARQLVRMLSQWPDTVQNTYKTLEPTTVLTYLFRMSHALSQSYDHLR---- 601

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +  + ++L   R+ L  A   ++ +G+ ++G+     M
Sbjct: 602 ---IVGSEKELMKARMALYDATRIVLRNGMILLGLNPVERM 639


>gi|328950287|ref|YP_004367622.1| Arginyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450611|gb|AEB11512.1| Arginyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 608

 Score =  316 bits (810), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 147/645 (22%), Positives = 253/645 (39%), Gaps = 104/645 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  S+L+  + +    + VE      +V++       G   T  A  L+R L   P  IA
Sbjct: 3   DVKSQLRTSVLQALQALGVED--PPEVVVQETPPDKPGDYGTPIAFQLARALRKPPPAIA 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   + +   V   F  G G++N  L P++L +  ++ +            +  KV +
Sbjct: 61  AQLAEHLPLPQGVARAFAVG-GYLNFELEPAHLIRAAAAPLE-------PFPKRPGKVLV 112

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  S NP   +HVGH R   +GD ++ ++ F+G EV    YI+D G Q+   A S+F   
Sbjct: 113 EHTSVNPNKELHVGHLRNICLGDAISRILRFAGREVEVLNYIDDTGRQV---AESLFALE 169

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAM 241
              L  + +   + +    Y++ + +ELAD  +   L    ++ L  ++       V  +
Sbjct: 170 HYGLTYDGTQKYDHWVGAAYVR-LHQELADPEAKARLEPRIQEVLHRLEAGELRDEVDKI 228

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++   + +  L  ++D+ + E D  R     +   +  L +  YV      P + K    
Sbjct: 229 VRAQLETMHRLGAEYDVLVWESDIVR--EGFLAKAMALLEQTPYV----SRPTQGKYAGA 282

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-------------- 347
             +D    L       +D    L++S+G+ TY A D+A+   K                 
Sbjct: 283 LVIDVSAFL----PGLEDPYLVLIRSNGTATYTAKDIAFQFWKMGLFKGLKFRPYAQEPS 338

Query: 348 -----------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCEL 388
                            G    I V+    S     + A           A+   L  E 
Sbjct: 339 GKTLYTSAPEGEAMPFGGAKETINVIDVRQSHPQAVVRASLEVEGRPDLAARAYHLAYET 398

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVR 423
           V L  +G P  +S R G  +++  V+DE                         VG  +VR
Sbjct: 399 VLL--EGKP--LSGRKGHTVSVDEVLDEAVRRARAIIAEKNPEHPDPNRAAEVVGIGAVR 454

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F M+  +  + +DF + +     + +   YVQYA+AR  SI R+A +     D D  P  
Sbjct: 455 FAMVKTEPKKQIDFRWEQALSF-EGDSGPYVQYAHARADSILRKAAEAGL-TDADADPTM 512

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
             P        E+QL   L  +P  +++A   + P+ LA YL DLA+    +  +  + P
Sbjct: 513 ATP-------YEVQLAKVLLRFPEAVQDAAEQKTPHILAQYLLDLAAA--WNAYYNAKTP 563

Query: 544 RLR---FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             R    V      L   RL+LV  +   + +GL ++G+ +P  M
Sbjct: 564 EGRPATPVLQAPEGLRGARLKLVRQLRDTLRTGLELLGITAPEVM 608


>gi|219114449|ref|XP_002176395.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402641|gb|EEC42631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 564

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 119/595 (20%), Positives = 216/595 (36%), Gaps = 81/595 (13%)

Query: 39  DCAHGHLSTNAAMILSRPLGLD---------PLTIAELIVARI-KIDPDVDSVFIAGKGF 88
           +  HG    NAAM +   L  D         P  +A  ++A I    P +  + + G GF
Sbjct: 1   NPKHGDYQCNAAMPVFAALKKDSSMPDNIRSPPDVARALMAAIGDTHPVIMELSMNGPGF 60

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +   + PS+L   +   + +GI      +       ++F S N    MHVGH R  ++G+
Sbjct: 61  VLCRIRPSFLETHVDRFLQTGIL--PKPLIPKQTCVVDFSSPNIAKEMHVGHLRSTIIGE 118

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +  ++ F G++V R  ++ D G Q   L   +   Y +   +N     +   P +    
Sbjct: 119 AVCRILEFVGHDVHRINHVGDWGTQFGMLIQYLKEEYPEVANHNSDVDDQAALPNI---- 174

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              +L   Y S    F E          +V A+     + L+   +  D+        R 
Sbjct: 175 --TDLTQFYKSAKARFDESADFKKTSQTNVVALQSGDPECLRIWKLLCDV-------SRQ 225

Query: 269 DPSPIRDIID-NLARQGYVYEGILPPP-----KSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
           +   +   +D      G  +     PP     ++      +    + +F   +    V  
Sbjct: 226 EFEKVYQRLDVTTHEFGESFYNAKIPPVIAEFEAAGKISVEEGGAKCVF---VDKFKVPL 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQ 380
            L KSDG Y Y + D+A  K +  E   D +I +       + K + A    +    + Q
Sbjct: 283 MLQKSDGGYGYDSTDMAALKYRLQELKADRIIVITDFSQGDHFKMVYAAGRDIGWLDRNQ 342

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
               +        DG   +   R+GD + L  ++DE                        
Sbjct: 343 QLEHIGFGTVQGEDGK--RFKTRSGDTVRLVDLLDEAVERMEGSLRERIESDKSNIALDE 400

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  +G  +V++  L R  +    F + ++ + +K +   Y+ YA  R  SI  +AK
Sbjct: 401 VHDIAEAIGYGAVKYYDLRRNPTTNYKFSYDQMLD-TKGDTGVYLLYARVRLESIVAKAK 459

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             +  +D +   +N   +      SE  L+  L ++P VIE       PY +  Y+Y LA
Sbjct: 460 QDY-SIDVEELIQNG-EKVRLTHPSERNLVFQLQQFPDVIEQTLEDLFPYHVCEYVYKLA 517

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                   +         V  ++      RL L HA +  ++   +++G+     
Sbjct: 518 VATSDFIKNC-------MVLGSDE--MKTRLLLCHATSLAMHQCFDLLGIRHVKR 563


>gi|110637981|ref|YP_678188.1| arginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280662|gb|ABG58848.1| arginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 621

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 123/613 (20%), Positives = 248/613 (40%), Gaps = 61/613 (9%)

Query: 14  YLKEIDCKIKVEKKIL----DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            LKE   K  +++  +    + I++E  R    G L+        +   + P  I   I 
Sbjct: 29  LLKESIAKGLLQEFSITVSAEDILLEPTRKDFEGSLTF-VVFPYIKQAKVAPEQIGARIG 87

Query: 70  ARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           A    D P V + F   KGF+N+  + +   + L +  +   +Y +   GKG KV +E+ 
Sbjct: 88  AFCAADIPAVVASFNVVKGFLNVVFNDALWVEQLYASFLR-PDYAQLQDGKGEKVMVEYS 146

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P+H+GH R   +G +++ ++  +G++V +   +ND G  I    ++ + +    
Sbjct: 147 SPNTNKPLHLGHLRNNFLGYSISQILKANGFDVIKANLVNDRGIHICKSMIA-YQKSGLG 205

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKI 244
                + +   +  G Y     K+L  +  + +    EE    K  PI+K+ +   ++K 
Sbjct: 206 ETPVSTGMKGDHLVGKYYVAFDKQLKKEVEALVAAGVEEDKAKKEAPILKE-AQAMLLKW 264

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            + D +  ++   +     D        I    D+   +   Y       +    +    
Sbjct: 265 EQGDKEVYDLWKTMNGWVYDGFNASYKKIGVTFDHFYYESNTYLLGKDIVEEGLAKGVFN 324

Query: 305 DR--KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
            R    +    T  G D ++ +L+SDG+  Y   DL   + KY+  G    +YV+G++  
Sbjct: 325 KRADGSVWIDLTAEGLD-EKLVLRSDGTSVYITQDLGTAELKYKDFGCKRSVYVVGNEQD 383

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---- 417
            +   L  +   + +  A     +   +     G   KM  R G  +    +VDE+    
Sbjct: 384 YHFIVLIHILKKLGKPYANGVYHMSYGMVDLPSG---KMKSREGTVVDADDLVDEMIATA 440

Query: 418 -------------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                    G  ++++ +L     + + F+  +  +  + +   
Sbjct: 441 KERTLEQGKTDGFSEEQATHLYETLGLGALKYFLLKVDPKKRMMFNPEESIDF-QGHTGP 499

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           ++QY +AR  +I R+A ++   ++  L   +VI +   F+ S L+    L+ +P  I  A
Sbjct: 500 FIQYTHARISAILRKAAELG--INEQLPAGHVINKLHPFEVSVLE---MLSRFPEKIREA 554

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  +A Y++D+A  ++  ++       +   Q  + +L   R+    AVA  I  
Sbjct: 555 GNDYSPSTIANYIFDVAKEYNRFYA------EVSIFQEPDEQLKSFRIAFCRAVAKTIKD 608

Query: 573 GLNIIGVESPNEM 585
           G+ ++G+E P +M
Sbjct: 609 GMLLLGIEVPEKM 621


>gi|13508295|ref|NP_110245.1| arginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501047|sp|P75222|SYR_MYCPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1673957|gb|AAB95934.1| arginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 537

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 148/586 (25%), Positives = 264/586 (45%), Gaps = 59/586 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            ++ L+  L  ++ +    K+++  +     ++ +    ++     L    G++    A+
Sbjct: 4   INTDLQECLNALNLEFDEHKELVKLV-----KNNSFSGFASTVVFHLK---GVNQKETAQ 55

Query: 67  LIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            I A +          VF+A   FIN  +SP      L +              K TKV 
Sbjct: 56  QIAAWLLKHKKAHYRRVFVANNNFINFEISPQKYLDFLKTK--------PTFAPKPTKVL 107

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IE+VSANPTG +H+GH R A  G  L +LM F G++  REY++ND G Q      SV+  
Sbjct: 108 IEWVSANPTGELHLGHVRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVYQA 167

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQA 240
                    +  P   Y G  +  + K +     DK S     F ++ +L  +       
Sbjct: 168 LHLQQNIKVTPHP-DGYEGELVDSIAKTITGIPLDKLS--FEEFLQQPFLDQLLADCTAK 224

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++++I+ DL  ++I  D +  E    +                   Y+ +L   K +   
Sbjct: 225 VLEVIKQDLATIHIHFDSWKFESQVVKETD----------------YKKLLTQFKDEAHY 268

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + D     +  ++T+ GDD DR L++ D   +YF  D+AY   K  RGFD +  + GSDH
Sbjct: 269 EKD---GAIWLKTTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDH 325

Query: 361 SGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            G++KR+  V   +   +K Q+ +   +LV LY++   +++SKRAG+ IT++ ++  +  
Sbjct: 326 EGHIKRMHCVYEGLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSE 385

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D+ R+ ML + N+ ++  D      Q+  NPV+YVQYAYAR  S+ +        +D   
Sbjct: 386 DAARWFMLSQTNNSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLK-------VVDQAA 438

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             + V          E+ L+  L  +  ++E   ++ E + L  YLY+ A++FH  +   
Sbjct: 439 LAQ-VNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKAC 497

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + N   ++     R L +       ++  +    L I+ + +P +M
Sbjct: 498 KINDPAQYNLTQQRLLLL------QSLHHVFGQLLQILNITAPQQM 537


>gi|213402307|ref|XP_002171926.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           [Schizosaccharomyces japonicus yFS275]
 gi|211999973|gb|EEB05633.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1
           [Schizosaccharomyces japonicus yFS275]
          Length = 618

 Score =  316 bits (809), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 125/635 (19%), Positives = 233/635 (36%), Gaps = 96/635 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +     ++Y+     KI    + L    +E         L+     + ++     P 
Sbjct: 28  VFKNPVDIYRSYIANELHKISGVDRELIYPALETNISKDAADLNLPVPRLRAK---GKPA 84

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT 121
            +A                  A   F+      S L + +L  I     EYGRN  G G 
Sbjct: 85  ELASKWAEAFPKGYVNCE---ANGIFLRFNFDGSKLTELVLPMIWSKQSEYGRNNSGNGK 141

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              IEF S N   P H GH R  ++G  LA+L    G++V R  Y+ D G Q   LA+  
Sbjct: 142 VAVIEFSSPNIAKPFHAGHLRSTIIGSFLANLHESQGWKVYRINYLGDWGKQFGLLAVGF 201

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL-------------------- 221
                +   + D   P  +   VY+K      A++   +                     
Sbjct: 202 ELHGDEEQLSKD---PIRHLYQVYVKINADATAEQEKIDAEKAEAEAAGKPYETPVTLHD 258

Query: 222 --------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   +   +E+ L +   +   ++ K+  +  + LNI++D +  E          +
Sbjct: 259 KARQFFKRMEEGDEEALKVWGRFRELSITKLQ-ETYERLNIKYDQYDGESQV---PLDLM 314

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYT 332
            + ++ L   G +                + D+  LL   +     + + ++ KSDG+  
Sbjct: 315 NEALEKLKTLGLI----------------EEDKGALLVDLSKHDKKLGKAIVQKSDGATL 358

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL------- 384
           Y   D+     +Y +  FD  IYV+ S    Y  +L  +   +  + A+  V        
Sbjct: 359 YLTRDIGTAIRRYNKYHFDKSIYVVASQQDLYFAQLFKIFELMGFEWAKKCVHINYGLVQ 418

Query: 385 -----------LCELVRLYRDGMPIKMSKRAGDFI---TLRHVVDEVGSDSVRFMMLWRK 430
                      L +++ + ++ M   M K    +        V D VG  +VR      K
Sbjct: 419 GMSTRKGKAVFLDDIMEVAKEEMHKVMKKNEEKYAQIKNPEEVADIVGKTAVRIQDSTGK 478

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                 FD+ ++    + +   Y+QYA++R  S+ R+    F D        +++ ++  
Sbjct: 479 RVNNYVFDWSRMLSF-EGDTGPYLQYAHSRLCSVRRK--VNFTDEQIANADLSLLKEQDA 535

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
           FD     L+  L++YP V++++   QE   +  YL+ L  +    +        + +VQ 
Sbjct: 536 FD-----LVRLLSQYPDVLKSSFRFQETSTVVTYLFKLTHMVSKLYD-------ILWVQG 583

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               L + RL L  A   ++ +G+ ++G+     M
Sbjct: 584 REEPLQLARLNLFGAARLVLYNGMTLLGLTPLERM 618


>gi|320165286|gb|EFW42185.1| rars protein [Capsaspora owczarzaki ATCC 30864]
          Length = 742

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/562 (21%), Positives = 221/562 (39%), Gaps = 73/562 (12%)

Query: 63  TIAELIVARIKIDPDVDS--VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IA  I   +     ++S    +  +GFI + +    L  IL++IVV G+   +    K 
Sbjct: 215 DIASAIHKNLPKSTLLESSHFEVDERGFITVVVPAKLLATILTNIVVHGVLPPKQE--KK 272

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V I+F S N    MHVGH R  ++G++L  L+ + G+EV R  ++ D G Q   L   
Sbjct: 273 KRVIIDFSSPNIAKEMHVGHLRSTIIGESLCRLLEYRGFEVLRVNHVGDWGTQFGMLIAH 332

Query: 181 VFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +   +      +    DL   Y          +E   +  +E++         +   ++ 
Sbjct: 333 LKDEFPNFRNESPPIGDLQAFYKASKKRFDADEEFKKRAYTEVVKLQAGTDADV--RHAW 390

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +    R + + +  +  + I E       P  +  ++ +L ++G+V            
Sbjct: 391 KLICDESRREFELIYKRLHVTIKEKGESFYQP-MMPSVVADLEKRGFVQ----------- 438

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357
                 D ++++F   +    V   + KSDG YTY  +DLA  K +  E   D +IYV+ 
Sbjct: 439 ----VEDGRKIMF---VPDQAVPLTVEKSDGGYTYDTSDLAAIKYRIEEEHADWIIYVVD 491

Query: 358 SDHSGYVKRLEAVAAAVSE-KKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
              S +++ + + A  V     A++ V  +   + L  DG   K   R+GD + L  ++D
Sbjct: 492 VGQSLHLETVFSAAKHVGWLDPAKVRVDHVAFGLVLGEDGK--KFKTRSGDTVRLVDLLD 549

Query: 416 E----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           E                            V   +V++  L    +    F F ++ +   
Sbjct: 550 EAVERAKVVLDSKRGGDLQPEEYAAALDAVSYGAVKYADLSTSRTSDYTFSFDRMLKLV- 608

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYP 506
            N   Y+ YAY R  SI R A             + +     EF    EL L   L  +P
Sbjct: 609 GNTAPYLLYAYTRMSSIARNAGID--------VSKEIAKHPCEFTEGPELALARALIRFP 660

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RLQLV 563
            ++   T    P+ L  +LY++  ++   +   R            + +  +   RL L 
Sbjct: 661 EILNRITDDLMPHTLGSFLYEICQLYSTFYEKLRIIEHDVDKATGTKTIKSIHYPRLALC 720

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            A + ++  GL+I+G++   +M
Sbjct: 721 EAASLVLKQGLSILGMDVVGKM 742


>gi|330721860|gb|EGG99825.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 462

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 104/491 (21%), Positives = 199/491 (40%), Gaps = 59/491 (12%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +++   N    MHVGH R  ++GD +  ++ FSG +V R+ ++ D G Q   L   +   
Sbjct: 1   MDYSGPNLAKEMHVGHLRSTIIGDAVVRVLEFSGDKVIRQNHMGDWGTQFGMLIAEL--- 57

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             Q    +D+ L        Y      + A K+  +  +F  +    +VK  S       
Sbjct: 58  EGQLQTESDAGLALADLESFY------QQAKKHFDDDPDFAAKARDYVVKLQSGDDRCLA 111

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +      +++ H    SE+ +   + S     I   +        ++   ++K       
Sbjct: 112 LWQQFIDVSVAH----SEEIYSTLNVSLKHQHIRPESAYNDDLAAVVADLQAKGLAVV-S 166

Query: 305 DRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
           D  Q++F    +   G+     + KSDG + Y  +DLA  + +  E   + ++Y + +  
Sbjct: 167 DGAQVVFLEELANKEGEPSVAIVQKSDGGFLYATSDLAALRYRQNELNAERILYFVDARQ 226

Query: 361 SGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSK---------------RA 404
           + +++++  +A           +  L     + +DG P K                  RA
Sbjct: 227 ALHLQQVFTIARKAGFVNENTGLEHLAFGTMMGQDGKPFKTRTGGTVKLAALLEESVERA 286

Query: 405 GDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
              I  +           V  +VG  +V++  L +  +    F++  +    + N   Y+
Sbjct: 287 AQLIAEKDPDLDAETRQQVARKVGIGAVKYADLSKNRTSDYIFNWDSMLSF-EGNTAPYL 345

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYAY+R +SIFR+A      L+ +L             ++E+ L + L ++  V+E    
Sbjct: 346 QYAYSRIQSIFRKAGVEPQALEGEL---------QLALSNEVALGLKLLQFSEVVEQVAD 396

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
              P  L  YLY+LAS +   +      P L+  +  + +    RLQL H VA  +++GL
Sbjct: 397 DCAPNVLCAYLYELASEYMSFYEAC---PILK--EGVDEQTRGSRLQLCHLVARTLSTGL 451

Query: 575 NIIGVESPNEM 585
           +++G+E    M
Sbjct: 452 DLLGIEVMERM 462


>gi|301633574|gb|ADK87128.1| arginine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 537

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 145/584 (24%), Positives = 262/584 (44%), Gaps = 55/584 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            ++ L+  L  ++ +    K+++  +     ++ +    ++     L    G++    A+
Sbjct: 4   INTDLQECLNALNLEFDEHKELVKLV-----KNNSFSGFASTVVFHLK---GVNQKETAQ 55

Query: 67  LIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            I A +          VF+A   FIN  +SP      L +              K TKV 
Sbjct: 56  QIAAWLLKHKKAHYRRVFVANNNFINFEISPQKYLDFLKTK--------PTFAPKPTKVL 107

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           IE+VSANPTG +H+GH R A  G  L +LM F G++  REY++ND G Q      SV+  
Sbjct: 108 IEWVSANPTGELHLGHVRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVYQA 167

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKEL--ADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                    +  P   Y G  +  + K +      +     F ++ +L  +       ++
Sbjct: 168 LHLQQNIKVTPHP-DGYEGELVDSIAKTITGIPLDNISFEEFLQQPFLDQLLADCTAKVL 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           ++I+ DL  ++I  D +  E    +                   Y+ +L   K +   + 
Sbjct: 227 EVIKQDLATIHIHFDSWKFESQVVKETD----------------YKKLLTQFKDEAHYEK 270

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D     +  ++T+ GDD DR L++ D   +YF  D+AY   K  RGFD +  + GSDH G
Sbjct: 271 D---GAIWLKTTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEG 327

Query: 363 YVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           ++KR+  V   +   +K Q+ +   +LV LY++   +++SKRAG+ IT++ ++  +  D+
Sbjct: 328 HIKRMHCVYEGLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDA 387

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            R+ ML + N+ ++  D      Q+  NPV+YVQYAYAR  S+ +        +D     
Sbjct: 388 ARWFMLSQTNNSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLK-------VVDQAALA 440

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
           + V          E+ L+  L  +  ++E   ++ E + L  YLY+ A++FH  +   + 
Sbjct: 441 Q-VNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKI 499

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N   ++     R L +       ++  +    L I+ + +P +M
Sbjct: 500 NDPAQYNLTQQRLLLL------QSLHHVFGQLLQILNITAPQQM 537


>gi|302383831|ref|YP_003819654.1| arginyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194459|gb|ADL02031.1| arginyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 600

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 114/627 (18%), Positives = 216/627 (34%), Gaps = 72/627 (11%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
             D  + L   +        V+  +      +RP         +N A+  ++ L  +P  
Sbjct: 1   MTDLRTALGEAVAAAFAAEGVDAALARVTTSDRP---DLADFQSNGALAAAKALKANPRE 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +  R+  DP + +V +AG GFINL ++ + L    + +       G + +    KV
Sbjct: 58  LAGRVAERLAADPRLSAVEVAGPGFINLKIADAALSARAAEVASDADHAGASPVAAPRKV 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-- 181
            I+F   N   PMHVGH R A++G++L  L  F G +VT + +  D G Q+  L ++   
Sbjct: 118 VIDFGGPNVAKPMHVGHLRSAIIGESLKRLFRFRGDDVTGDAHFGDWGFQMGLLIVACGD 177

Query: 182 ------FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK------- 228
                 F       +  +S +  G    +Y    G+   D    +       +       
Sbjct: 178 EGLADGFMADGDGPFPAESPVTLGDLDRLYPLAAGRAKEDPAFRDRARKATAELQGGRPG 237

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +L + + +   +   ++R+    L +  D++  E D        + D    L  +  + E
Sbjct: 238 YLALWRHFVAVSREALVRE-YGTLAVDFDLWNGESDADPLIAGMVVD----LKTKALLVE 292

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER- 347
                            +K                ++ S+GS  Y   DLA    +  R 
Sbjct: 293 DDGAQVVHVARPGETRKKKLADGSVVEAPSPPPLLVVSSEGSAMYGTTDLATILDRRNRI 352

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-- 405
             D ++YV+    + + +++   +      +      L        DG P K   RAG  
Sbjct: 353 DPDLILYVVDERQAEHFEQVFRASILARYAEPGSLEHLGFGTMNGTDGKPFK--TRAGGV 410

Query: 406 ---------------------------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
                                      D  T      +V   +++F  L    +    FD
Sbjct: 411 LKLNDLITQATDKARDRLREAELGADLDEATFEDTAHKVAIAALKFADLSNSRTTSYVFD 470

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +     +     Y+ Y   R +S+ R+A +                     + +E  L
Sbjct: 471 LDR-FMSFEGKTGPYLLYQVVRIKSLLRRAAEQEAKAGLVAIS----------EPAERDL 519

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            + L  + + +  A   + P+ +A + Y LA  F   ++          + A +      
Sbjct: 520 ALTLDAFDQAVVEAYDKRSPHVIAEHAYRLAQAFSKFYAAC------PVLAAADPATVGS 573

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A    +   L ++G+++P  M
Sbjct: 574 RLTLSKAALDQLVIALGLLGIDAPERM 600


>gi|322697634|gb|EFY89412.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 633

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 119/620 (19%), Positives = 225/620 (36%), Gaps = 80/620 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           + +L ++  KI   +  +    +   +    G      A+   R  G     +A+    +
Sbjct: 40  RAHLSDVLSKISGVETSIIYPAVMWTQSLDKGDF--VVAVPALRIKGKKADVLAQEWAEK 97

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILS-----------SIVVSGIEYGRNLIGKG 120
              D  + +       F++ ++    L + +                +G+   +NL    
Sbjct: 98  FPEDDPLFNKPALSGHFMSFFVKGGPLIESIIPLVRKTGKDFGENRFNGLRDPKNLSSGK 157

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +EF S N   P H GH R  ++G  +A+L   +G++V R  Y+ D G Q   LALS
Sbjct: 158 KRIIVEFSSPNVAKPFHAGHLRSTIIGSFIANLYEANGWDVVRMNYLGDWGKQYGLLALS 217

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL--------KHVGKELADKYSSEL-------LNFP 225
                +       +  P  +   +Y+        +    E   K   ++       L+  
Sbjct: 218 Y---ERNGNEEELNKNPIDHLFKLYVQINAEMSAEKEAIEEQKKEGKDVSALEANSLDEQ 274

Query: 226 EEKWLPIV--KDYSVQAMMKIIR--------DDLKALNIQHDIFISEDDFHRGDPSPIRD 275
             ++   +  +D +V +  +  R        +    LNIQ D F  E        S I  
Sbjct: 275 ARQYFRRMTDRDEAVLSQWQQFRDLSIARYKETYSRLNIQFDEFSGESQVSEESMSKIA- 333

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
             D +  +    E         T      + K+L              L K DG+  Y  
Sbjct: 334 --DEMKEKNISREDKGAVLVDFTQLLPGKEGKRL----------GTTVLRKRDGTALYLT 381

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-------KAQINVLLCE 387
            D+     ++E+  FD+MIYV+ S    ++K+L  +   +  K            ++L +
Sbjct: 382 RDVCELLGRHEKYNFDHMIYVVASQQDLHLKQLFQIIELLGYKDIAKKCQHINFGLVLDD 441

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           +++   D M   M K    +  +       D +G  SV    +  K      F+   +  
Sbjct: 442 ILKDCADHMHETMKKNEEKYAQVEDPDATADTLGISSVMVQDMSGKRINNYTFNMEAMTS 501

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + +   Y+QYA+AR  SI R+A     DLD               +   + ++  L++
Sbjct: 502 F-EGDTGPYLQYAHARLCSIKRRANLTDEDLDSANLSL-------LKEDHAVNIVRMLSQ 553

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +P V++N     EP  +  YL+ +  V    + H +       V  + R+L   R+ L  
Sbjct: 554 WPDVLQNTLKTLEPTTVLTYLFKMTHVISSSYDHLQ-------VVGSERELMKARMALYD 606

Query: 565 AVASIINSGLNIIGVESPNE 584
           A    + +G+ I+G+     
Sbjct: 607 AARITLANGMRILGLTPLER 626


>gi|325186294|emb|CCA20800.1| arginyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 652

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 134/617 (21%), Positives = 240/617 (38%), Gaps = 99/617 (16%)

Query: 26  KKILDRIVIERPRDCAHGHLSTNAAMILS--RPLG-LDPLTIAELIVARIKIDPDV-DSV 81
           +K+  ++ I R          +N A+IL+   P   L P  IA  ++  +  +P +  + 
Sbjct: 78  EKLTPQLGIRRSTQPKI-DFQSNIALILAHSSPYNALQPSEIAHKLLENLPSEPRILQAA 136

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            ++  GF+N  L   +L + +  +             +   + ++F S N    +HVGH 
Sbjct: 137 SVSPAGFLNFTLCDRFLARFVHEMASHNE---PQHSEESRSILVDFASPNYGKKLHVGHL 193

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGY 200
           R +V+GDT+ +L+ + G++V R  +  D G+ + TL  S+   +   AL  NDS L   Y
Sbjct: 194 RSSVIGDTICNLLEYRGHKVARVSHSGDLGSAMATLLASIVTEKESYALMRNDSQLAAMY 253

Query: 201 YPG----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNI 254
             G       K  G     K+   LL  PE       +D     + +  + +D  + +  
Sbjct: 254 ERGKMQLARDKTGGFTSLVKHIVLLLQQPENPSSTFHRDILAMWRHICALSQDSYQRIFE 313

Query: 255 QHDIFIS---EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           + ++ +    E  + R     I  ++++L  +G +                       +F
Sbjct: 314 RLNVSVENRPESSYIRM----IHPVLEDLKSRGIITRS---------------QGADCIF 354

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY------ERGFDNMIYVMGSDHSGYVK 365
            S  +       + K DG + Y   DLA   C+          ++ +IYV     S + +
Sbjct: 355 VSPQLP---PLIVRKKDGGFLYATIDLACLYCRLFGSEIDATRYNEIIYVTDQSQSLHFQ 411

Query: 366 RLEAVAAAVSE----KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------ 415
           +L   A          K +++ +   LV L  DG   K+S R G F  L  ++D      
Sbjct: 412 QLFLAAQRAEWIGKSSKVELHHVAFGLV-LGSDG--SKLSSRNGAFDYLEDLLDTAAIEC 468

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 +G  +VR+  L ++ +    F + +     K N   Y+
Sbjct: 469 QNRSILPSNELEKRAGKELFCRIGDAAVRYFELSQQRTRDYKFTWDQALSF-KGNTGVYL 527

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE------SEFDTSELQLIVHLAEYPRV 508
            YA AR   I R+   +  +LD+++  R    +E      + + +SE  L + LA+    
Sbjct: 528 LYACARLEGILRK---LHQELDYEVLSREKSTKELLTASSAHWQSSERALALILAQMEDE 584

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  AT    P+ L  YLY +AS FH  +   R                  RL L      
Sbjct: 585 VSTATTHLTPHTLCEYLYRVASHFHAFYEDCRVVGV---------PEMEARLCLCALTWK 635

Query: 569 IINSGLNIIGVESPNEM 585
           I+  GL+++G+E  + M
Sbjct: 636 ILTRGLHLLGIEPVDRM 652


>gi|328851981|gb|EGG01130.1| hypothetical protein MELLADRAFT_45216 [Melampsora larici-populina
           98AG31]
          Length = 623

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 211/571 (36%), Gaps = 75/571 (13%)

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-------- 108
           L  DP   A  +      +  ++S   A   FIN  +    L K++ S +          
Sbjct: 86  LKGDPKAFALKVQEEFVPNEWIESAK-ANGSFINFQIRSKTLAKVVLSQINDLTHISKSS 144

Query: 109 ---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
                    + +G+  K+ +EF S N     H GH R  ++G  L +L   +G++VTR  
Sbjct: 145 YGSNTSGYDSTLGRKKKLILEFSSPNIAKKFHAGHLRSTIIGAFLGNLHEANGWDVTRIN 204

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---------HVGKELADK 216
           Y+ D G Q   LA+  F RY     N  ++ P  +   VY +             E   +
Sbjct: 205 YLGDWGRQFGVLAVG-FERY--GSENELTEQPIQHLLDVYTRINRDMEGGEKEALEQKAR 261

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              +L+   +   + + K +     +K    D   LNI+ D++  E          +   
Sbjct: 262 DFFKLMEDGDSTAVALWKRFR-DYSIKQYEADYARLNIKFDVYSGESQVS---IESMDSA 317

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++ L ++G   E          T  CD+D+ +L              + K+DG+  Y   
Sbjct: 318 LEILKQKGIAIE-------DNGTLICDLDKYKL----------GRTVIRKNDGTNLYITR 360

Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--------------- 380
           D+     +YE   FD MIYV+ S    ++ +   V   +  + A+               
Sbjct: 361 DIGAAIQRYEQYKFDKMIYVVASQQDLHLAQFFKVLELMEFEWAKRLVHINFGMVAGMST 420

Query: 381 ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSEL 434
               +V L +++   R+ M  +M K    +  +       DEVG   ++   +  K    
Sbjct: 421 RKGTSVHLEDMMNEARNTMHEQMLKNEDKYKEIPDPMGTADEVGLSGIKIQDMAGKRING 480

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            +F + +V    + +   Y+QYA+ R  S+ R+A         D     +       D  
Sbjct: 481 YEFKWDRVLSF-EGDTGPYLQYAHVRLCSVERKAGPAHVLPQPDQLATTINTDLICEDPK 539

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
              L++ LA YP  ++ A +  EP  +  Y + L       W           V+    +
Sbjct: 540 ARDLLMLLACYPDAVKLAFLKLEPSSIVTYCWKLTHAVSSAWE-------TLIVRGQTPE 592

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + + RL +  A   ++ S + ++ +     M
Sbjct: 593 MALARLWVFRACKDVLASAMKLLTLNPLERM 623


>gi|187918455|ref|YP_001884018.1| arginyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689294|sp|B2S0U2|SYR_BORHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119861303|gb|AAX17098.1| arginyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 584

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 130/622 (20%), Positives = 247/622 (39%), Gaps = 75/622 (12%)

Query: 1   MY--LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           M   +  D    +   +KE+  +  ++ + ++ I++++P     G LS       S+ L 
Sbjct: 1   MNSKIKKDLKDIISKTIKELALRESIKLEEIN-IIMQKPPKSELGDLSI-LIFEFSKILK 58

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117
           L+   I E I+ +I           A   ++N+  +   Y++  +  +     +YG N +
Sbjct: 59  LNTSIITEEIIKQIGDKYATK----AMGPYLNIKFNRKEYIKDTIKKVNEQKEKYGINNV 114

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K  ++ IEF S N   P+H+GH R  ++G++L+ ++  SG +VT+   IND G  I   
Sbjct: 115 LKNKRIIIEFSSPNTNKPLHIGHLRNDIIGESLSRILKASGAQVTKINLINDRGTHICKS 174

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKWLPI 232
            L+ + ++        S     +  G  Y+K+       E+A+    +LL   EE     
Sbjct: 175 MLA-YKKFGNNTTPELSLKKGDHLIGDFYVKYNEYAKNNEMAEDEIQQLLCKWEEGDEKT 233

Query: 233 VKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           V+ +       I  I+   K  NI  D    E +  +      R+II     +G  Y+  
Sbjct: 234 VQLWKKLNQWAIEGIKATYKLTNITFDKIYLESEIFKIG----REIILKGLEEGLCYK-- 287

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF-KCKYERGF 349
               +       D+  ++             + LL+++G+  Y   DL      K E  F
Sbjct: 288 ----REDGAICIDIPTEKNEISEQQF---KQKVLLRANGTSIYLTQDLGNIVTRKNEFDF 340

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D MIYV+GS+   + K L  VA  +   K   +  L   +V L       KM  R G+ I
Sbjct: 341 DEMIYVVGSEQIHHFKTLFYVANKLGITKENNLVHLSYGMVNLPEG----KMKSREGNVI 396

Query: 409 TLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
              +++ +                         +   ++ + +L     + + F+  +  
Sbjct: 397 DADNLIHDLSESIILEIKKRNSDKKDYQEIALNISLGAIHYYLLKTAIHKDILFNKEESL 456

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
             +  N   Y+QY  AR  SI  +  ++             I  +   + +E ++I  ++
Sbjct: 457 SFT-GNSGPYIQYVGARINSILEKYDELN-------LSNETINFDLLVNENEWEIIKIIS 508

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+   I  A+  + P  +A Y Y LA  F  ++         + +  N  +LT  R+ L 
Sbjct: 509 EFEEHIIKASKDRNPSVIANYSYLLAKSFSTYYQD------TKIIDKNKPELTHARIDLS 562

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV   I + ++++ +    +M
Sbjct: 563 KAVLQTIKNCMHLLNIPYMKKM 584


>gi|197106356|ref|YP_002131733.1| arginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690131|sp|B4R8T9|SYR_PHEZH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|196479776|gb|ACG79304.1| arginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 593

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/638 (18%), Positives = 223/638 (34%), Gaps = 101/638 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            +D  + L   ++       V  ++      +RP         +N A+  ++ +G +P  
Sbjct: 1   MSDLKTALGEAVEAAFAAEGVPAELARVTASDRP---DLADFQSNGALAAAKRVGKNPRE 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IA  +  R++ DP + SV IAG GF+NL +         +  + +    G   +    +V
Sbjct: 58  IATAVAGRLQGDPRLASVEIAGPGFLNLKV-ADAALAARADAIAADPRAGAGTVPAPRRV 116

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +++   N   PMHVGH R +++G+++  L  F G  V  + +  D G Q+  L  +V  
Sbjct: 117 IVDYGGPNVAKPMHVGHLRASIIGESVKRLYRFRGDTVIGDAHFGDWGYQMGLLIGAVCD 176

Query: 184 RYQQ---------ALYNNDSDLPEGY-YPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              +         A  + + ++P  +    +        LA     E   + +       
Sbjct: 177 EDAEIRALVDQLNASGDPNGEIPAAFERVTLADLDRLYPLAAAKGKEDPAYRDRARKLTA 236

Query: 234 KDYSVQ----AMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
              + +     + +  RD        D  AL +  D +  E D        I+ ++  LA
Sbjct: 237 DLQAHKPGCYLLWRRFRDVTQVALERDFHALGVDFDWWKGESDV----DHLIQPMVAELA 292

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338
            +G + +                D+   + R    GD  + P   ++ S+GS  Y   DL
Sbjct: 293 DKGLLVD----------------DQGARIVRVAREGDKRELPPLLVVSSEGSAMYGTTDL 336

Query: 339 AYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           A    + +R FD   +IY +    + + + +   A      +      +        DG 
Sbjct: 337 ATILDR-KREFDPQLVIYCVDQRQADHFEIVFRAAYLAGYAEEGQLEHIGFGTMNGTDGK 395

Query: 397 PIKMSKRAGDFITLRHVVD-----------------------------EVGSDSVRFMML 427
           P K   R G  + L  +++                             +V   +++F  L
Sbjct: 396 PFK--TREGGVLKLADLIEMTRSKARERLHEAGLGEDLPAEEFEDIAGKVAVAALKFADL 453

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                    FD  +     +     Y+ Y   R +S+ R+A+                  
Sbjct: 454 SNFRGTSYVFDLDRFTSF-EGKTGPYLLYQAVRVKSLLRKAEAEGAQAGPVTVA------ 506

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               + +E  L++ L  +   ++ A   + P  LA + Y L+  F   ++          
Sbjct: 507 ----EPAERDLVLTLDAFETALQEAYDKKAPNALAEHAYRLSQAFSKFYAAC-------P 555

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + A    +   RL L  A    +   L+I+G+  P  M
Sbjct: 556 ILAAPPPVRGSRLTLAQATLRQLELALDILGIAVPERM 593


>gi|330928443|ref|XP_003302265.1| hypothetical protein PTT_14014 [Pyrenophora teres f. teres 0-1]
 gi|311322493|gb|EFQ89647.1| hypothetical protein PTT_14014 [Pyrenophora teres f. teres 0-1]
          Length = 646

 Score =  314 bits (805), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 126/663 (19%), Positives = 231/663 (34%), Gaps = 120/663 (18%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +  F  + S +   L ++     V+K I+    +       HG L    A+   R    D
Sbjct: 26  LNPFDIYRSHITELLSQVS---GVDKHII-YPTLAWTAKPEHGDLQ--LAVPALRQKKKD 79

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------G 109
               A+ +       P V    +     I  +  P  L  ++  +V+            G
Sbjct: 80  MKAYAQELADAFPESPLVKKPIVTNTS-IGFFFKPETLTSLVVPMVIKSKDDYGFNKNFG 138

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           ++   +      K+ +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+ D
Sbjct: 139 LKNPLDPSSGAKKMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYERAGWDVVRMNYLGD 198

Query: 170 AGAQINTLALS--VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            G Q   LA+   ++   ++ + N    L + Y     ++H   E       E+    EE
Sbjct: 199 WGKQYGVLAIGFDLYGNEEELVKNPIGHLYDIYVKVSNVQHQEAEEMKALKEEVAKLNEE 258

Query: 228 -----------------------------------KWLPIVKDYSVQAMMKIIRDDLKAL 252
                                              K L I K +   ++ K  +     L
Sbjct: 259 GKDASEQENKIKKIETEGIDEQARKYFKGMVDGEPKALGIWKRFRDLSIEKY-KQTYARL 317

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           NI +D +  E          +      +  +G                 C      ++  
Sbjct: 318 NIHYDDYSGESQV---KDESMELAAKIMWEKG----------------VCQDSEGAVIVD 358

Query: 313 STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
            T     + + ++ K DG+  Y   D+     + E+  FD MIYV+ S    ++ +L  +
Sbjct: 359 LTPHSKKLGKAVIKKKDGTSLYLTRDIGAAIERVEKYHFDKMIYVVASQQDLHLAQLFKI 418

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------- 417
              +  K       + E  +    GM + MS R G    L  ++ +V             
Sbjct: 419 EELMGRKD------ISEKCQHINFGMVLGMSTRKGTAKFLDDILRDVGDKMHEVMRTNET 472

Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                          G  +V    +  K      FD  ++    + +   Y+QYA+AR  
Sbjct: 473 KYAQVKDPEKTADTLGISAVMVQDMKGKRINNYTFDMDRMTSF-EGDTGPYLQYAHARLC 531

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI+R+A D  P L+ ++   +        +   ++L+  LA +P    N    QEP  + 
Sbjct: 532 SIYRKAVDADPSLE-EIDLASAADLSLLKEDKAVELVRQLASWPDTFVNTLKTQEPTTVL 590

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ +A      + H +       V  + + + + RL L  A   ++ +G+ ++G+   
Sbjct: 591 TYLFKMAHALSSSYDHLQ-------VVGSEKNVLIARLALYVAARQVLYNGMKVLGLSPV 643

Query: 583 NEM 585
             M
Sbjct: 644 ERM 646


>gi|50284829|ref|XP_444842.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524144|emb|CAG57735.1| unnamed protein product [Candida glabrata]
          Length = 605

 Score =  314 bits (805), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 133/627 (21%), Positives = 238/627 (37%), Gaps = 94/627 (14%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +       L N L  +        K+ + I +        G L      I++     D 
Sbjct: 30  NVLDIIKENLSNKLSSL--SGVDNNKVFNSIDV--TSGLEKGDLIIPLPKIVA--HKEDL 83

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKG 120
           +++A     ++   P +  V   G  F+  ++ P YL  K+L  I+     YG+  + K 
Sbjct: 84  VSLARTWGEKLSDQPYMAKVVANGP-FLQFFIEPHYLTGKLLPKILEERERYGQIPLVKD 142

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV IEF S N   P H GH R  ++G  L++L    G+ VT+  Y+ D G Q   LA+ 
Sbjct: 143 KKVLIEFSSPNIAKPFHAGHLRSTIIGGFLSNLFQNFGWNVTKMNYLGDWGKQFGVLAVG 202

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKE-------LADKYSSEL---LNFPEE 227
                 + +   D+     +   VY+   K +  E       L D+ + E    L   + 
Sbjct: 203 FERYGDEKMLETDA---INHLFEVYVKINKDIENEKSSNGKSLIDEQAKEYFCKLENNDT 259

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             + + K +   ++ K  ++    LNI +D++  E    +     + ++   L   G + 
Sbjct: 260 DAIKLWKKFRNLSIRKY-KETYSKLNIDYDVYSGESQVSKETILLVNNM---LQASGLLK 315

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYE 346
           E       S   +  D+ + Q    +          + KSDG+  Y   D+A     K E
Sbjct: 316 E-------SNGAKVVDLSKAQKSLGA--------VVVQKSDGASLYITRDIAAAIERKRE 360

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV+ S    ++K+L  +   +  + A         +     GM   MS R G 
Sbjct: 361 YNFDKMIYVVASQQDLHMKQLYQILKELKFEWA-------TSLEHINFGMVQGMSTRKGT 413

Query: 407 FITLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFD 438
            I L ++++E                            +G+ +V    +  K      F 
Sbjct: 414 VIFLDNILEEAQQQMLSVMSKNDVKFTQVKNPSEIAYLIGTSAVMIQDMQSKRKNNYKFK 473

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + ++    + +   Y++YA++R +SI  + K +   L         +  E   +   L L
Sbjct: 474 WERML-TFEGDTGPYLEYAHSRLKSIELKNKHLHESL-------TPVNYELIGEQDALDL 525

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  ++ Y  V++ A   +EP  L  YL+ +A      +       R  +V      +   
Sbjct: 526 VRVMSRYHEVLKKALETREPSTLVTYLFKIAHQVSKCY-------RTVWVSGQPDDVAKA 578

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   I+ +GL ++GV   + M
Sbjct: 579 RLHLFMASRQILYNGLKLLGVTPVDRM 605


>gi|297566840|ref|YP_003685812.1| arginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851289|gb|ADH64304.1| arginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 612

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 142/641 (22%), Positives = 255/641 (39%), Gaps = 102/641 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           LK+ L +    + V +  L  IV++       G   +  A  L+R L   P  IA  I  
Sbjct: 8   LKSALAQALQSLGVSE--LPEIVLQETPPGKGGDYGSPVAFTLARTLRKAPPQIALEIAQ 65

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           ++++ P V   F  G G++N  L P++L       V +     R L  +  KV IE  + 
Sbjct: 66  KLELPPFVRRAFAVG-GYLNFELDPAFL-------VQAATHPPRPLPPQPGKVLIEHTAV 117

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NP   +HVGH R   +GD +A ++ ++G +V    YI+D G Q    A S+F      L 
Sbjct: 118 NPNKELHVGHLRNVCLGDAVARILRYAGRQVEVLNYIDDTGRQ---AADSLFALQHYGLV 174

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIR 246
            + S   + +    Y++ + ++L D+     L       L  ++       V  +++   
Sbjct: 175 YDGSKKYDHWVGEAYVR-LHRDLEDEAKKAQLEPQIALVLHRLEAGELRAEVDKILRAQL 233

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +  L  ++D+ + E D  R     +   +  L R  +V    L P + K      +D 
Sbjct: 234 ETMLRLGARYDLLVWESDIVR--EGLLHKALAILERSPHV----LRPSEGKYAGALVIDA 287

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY--------------------- 345
             ++       +D    L++S+G+ TY+A D+A+   K                      
Sbjct: 288 SAII----PGLEDPYFVLVRSNGASTYYAKDIAFQMWKMGLLQGLKFDPYPGDYPAFTPG 343

Query: 346 --------------ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVR 390
                           G    I V+ +  S     + A          A+    L     
Sbjct: 344 RLMYTSTPSGHLQEHTGASETINVIDARQSHPQMIVRAGLEVAGRHDLAEGAYHLAYETV 403

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFM 425
           L       +MS R G  +++  V+DE                         +G  +VRF 
Sbjct: 404 LLEGK---QMSGRKGITVSVDEVLDEAVQRARAIIAEKNPLHPDPQTAAEQIGVGAVRFA 460

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           M+  +  + +DF + +     + +   Y+QYA+AR  SI R+A++               
Sbjct: 461 MVKTEPKKQIDFRYDQALSF-EGDTGPYLQYAHARAGSILRKAEEQGV--------LGEA 511

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH-GRENPR 544
           P  ++    E+ L   L  +P V++ A  ++ P+ LA YL DL + ++G+++    E   
Sbjct: 512 PDYTQATPYEVGLAKALLRFPAVVQEAAASKAPHVLAQYLLDLGAAWNGYYNAKTAEGKP 571

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V +    L  +RL+LV ++   +N GL ++G+ +P  M
Sbjct: 572 ATAVLSAPVGLRGVRLELVKSLKQTLNQGLTLLGLNAPEVM 612


>gi|291396590|ref|XP_002714514.1| PREDICTED: arginyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 625

 Score =  314 bits (804), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 115/596 (19%), Positives = 221/596 (37%), Gaps = 81/596 (13%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
           K +  + + R  + A   LS ++ +  +     D    A+ +  ++K D  V  +   G+
Sbjct: 74  KSISAVPVSRKEEVADFQLSLDSLLANNNHSSSDIQVQAKRLAEKLKCDTVVSEIS-TGR 132

Query: 87  GFINLYLSPSYLRKI-LSSIVVSGIEYGRNLI----GKGTKVNIEFVSANPTGPMHVGHC 141
           G +N  ++   L K  L  ++  G +YG            K+ +EF S N     HVGH 
Sbjct: 133 GTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGVPQKKIVVEFSSPNIAKKFHVGHL 192

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDSDLPEGY 200
           R  ++G+ +A+L    G++VTR  Y+ D G Q   L        Y++ L +N        
Sbjct: 193 RSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHLFEI 252

Query: 201 YPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y  V  +    +   K + E    L   + +   + + +   ++ + IR   K L++  D
Sbjct: 253 YVQVNKEAADDKSVAKSAQEFFQRLELGDAQAFSLWQKFRDLSIEEYIRI-YKRLDVYFD 311

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E  F+R      R+I+  L  +G + + +        +   D      + R     
Sbjct: 312 EYSGES-FYREKS---REILKLLDSKGLLKKTVKGTAVVDLSGNSDPSSICTVMR----- 362

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                    SDG+  Y   DLA    + ++  FD MIYV       + +++  +   +  
Sbjct: 363 ---------SDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGY 413

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
                 V  C+ V     G+   M  R GD   L  V++E                    
Sbjct: 414 DW----VERCQHVPF---GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKKLEN 466

Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
                  VG  ++              F + ++  QS+ +   ++QY +AR  S+     
Sbjct: 467 PQETAEKVGLAALIIQDFRGALLSDYQFSWDRI-FQSRGDTGVFLQYTHARLHSLEE--- 522

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                  F     N        +   + ++ HL  +  V+  ++   +P  +  YL  L+
Sbjct: 523 ------TFGCGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLS 576

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +            +   ++ +  ++   RL L  AV S++ +G+ ++G+     M
Sbjct: 577 HL-------AAVAHKTLHIKDSPPEVAGARLHLFKAVRSVLANGMKLLGITPVCRM 625


>gi|281203852|gb|EFA78048.1| arginyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 567

 Score =  314 bits (804), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 123/593 (20%), Positives = 228/593 (38%), Gaps = 75/593 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAA-MILSRPLGLDPLTIAELIVA 70
           K    +      + ++ L +  IE P++     L+     +   + L  +P  +A    A
Sbjct: 5   KEIASQFSKLTDIPEEQLLQC-IETPKNKDMADLALPVPKLNRFKKLPGNPAQLATEYAA 63

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           +  ++  +  V +AG  +IN  ++ + L + IL  ++ +G +YG    G+G  + IEF S
Sbjct: 64  KFVLNDLIKEVTVAGT-YINFKINRTILTESILKEVLAAGDKYGCTKQGEGKTIVIEFSS 122

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQA 188
            N   P H GH R  ++G+ L ++    GY V    Y+ D G Q   LA+    +  +QA
Sbjct: 123 PNIAKPFHAGHLRSTIIGNFLVNVYRSLGYTVQSINYLGDWGKQYGLLAIGYDRFGSEQA 182

Query: 189 LYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAM 241
           L  +    P  +   VY+K         E+ D+  +   +  +  E  L +   +   ++
Sbjct: 183 LLED----PIKHLFDVYVKINNTAETEPEIHDQARAYFKDMEDGNENALKLWSKFRDLSI 238

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            K  ++    LN+Q D +  E     G  S      + L + G V               
Sbjct: 239 EKY-KEIYGRLNVQFDEYSGESKMCDGMVSAY----EKLDKLGLV--------------- 278

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDH 360
            D    +++  ST   D     + K+DGS  Y   D+A     K +  F+ MIYV+ S  
Sbjct: 279 EDSKGAKIIDLSTAKPDLGKVLVKKTDGSSLYITRDIAAASIRKEQYNFEKMIYVVASQQ 338

Query: 361 SGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRLYRDGMPIKMSK 402
             + ++L  +   +    ++                    V L E++   +  M   M K
Sbjct: 339 ELHFRQLFKILERMQYPWSKELTHIGYGLVKGMSTRKGTVVFLEEILNESKSIMLETMKK 398

Query: 403 RA---GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                 +      V D V   +V       K ++  DF++ ++    + +   Y+QYA+A
Sbjct: 399 NEQKFAEIENPDEVADIVAVSAVIIQDFSAKRNKDYDFNWERMLSF-EGDTGPYLQYAHA 457

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  SI R+           L P   +      +     L   +  YP +++ A    EP 
Sbjct: 458 RLCSIERKTG-------VSLNPSANLSL--LVEPIAYNLATIIQRYPEIVQIAFNNNEPN 508

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
            +  YL++L             +  L+ V+ + + L   R  L +    ++ +
Sbjct: 509 TIVTYLFELCHEISA------AHSALK-VKGSEQSLAEARYVLFYCAKLVLCN 554


>gi|164425840|ref|XP_959285.2| arginyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|157071086|gb|EAA30049.2| arginyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 640

 Score =  313 bits (803), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 125/646 (19%), Positives = 241/646 (37%), Gaps = 100/646 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L   + + L N L E+     V+  I+    +        G ++     +  R  G  
Sbjct: 34  LNLMDLYRAHLANVLSEVT---GVDTAII-YPNLGWTSGLDKGDIALPVPSL--RVKGKK 87

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-----------VSG 109
           P  +A+   A+      + +     +  ++ ++  S L   +  +V             G
Sbjct: 88  PDELAQEWAAKFPDTDPLFTKPTVSQIHLSFFVKASPLVNAVIPMVQHKGAEYGFNKADG 147

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           ++  ++      ++ +EF S N   P H GH R  ++G  L++L A +G++V R  Y+ D
Sbjct: 148 LKDPKDPSKGQKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWDVIRINYLGD 207

Query: 170 AGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----------- 217
            G Q   LAL+   +  ++AL  +    P  +   +Y++   +  A+K            
Sbjct: 208 WGKQYGLLALAYEKYGDEEALQKD----PINHLFQLYVRINTEMTAEKEELTKRKEAGED 263

Query: 218 ----SSELLNFPEEKWLPIV--KDYSVQAMMKIIR--------DDLKALNIQHDIFISED 263
                +  L+    ++   +  +D    AM K  R        D    LNI  D +  E 
Sbjct: 264 VSALEANSLDEQARRYFKKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHFDEYSGES 323

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                  + + ++++                + K  Q  D             G  +++P
Sbjct: 324 QVSEEAMNKVGNLMEEKK----------ICKEDKGAQLIDFSE----LVPGKEGKRLEKP 369

Query: 324 LLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--A 379
           L++  DG+  Y   D++    ++E+  FD MIYV+ S    ++++L  +   +  K    
Sbjct: 370 LVRKRDGTALYLTRDISELLGRHEKYNFDKMIYVVASAQDLHLRQLFKIIELLGYKDIAD 429

Query: 380 QINV-----------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419
           +                     L +++R   D M   M K    +  +       D +G 
Sbjct: 430 KCQHINFGLVLGMSTRKGTVKFLDDILRDVADKMHEVMKKNENKYSQIEDPLATADVLGI 489

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            SV    +  K      F+   +    + +   Y+QYA+AR  SI R+A     +L    
Sbjct: 490 SSVMVQDMSGKRINNYTFNMETMTSF-EGDTGPYLQYAHARLNSIRRKAGVSDEEL---- 544

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       +TS + L  H+A +P V++N     EP  +  YL+ L       +   
Sbjct: 545 ---ATADLSLLTETSAINLCRHMAGWPDVVKNTLKTLEPTTVLTYLFKLTHALSSSYDQL 601

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +       V  +  +L   RL L  AV +++ +G+ +IG+   + M
Sbjct: 602 Q-------VVGSEPELMKARLALYTAVQTVLANGMRLIGLSPVDRM 640


>gi|323436087|ref|ZP_01050304.2| arginine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|321496402|gb|EAQ38703.2| arginine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 670

 Score =  313 bits (803), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 124/665 (18%), Positives = 241/665 (36%), Gaps = 110/665 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S ++ ++K    +I   K  L  +  +  R    G + T     + R +  +P+ I  
Sbjct: 30  LQSTIETHVKAAVAEIY--KAELPAVEFQATRKEFEGDI-TVVVFPMLRVVKGNPVQIGT 86

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   +    +  + F   KGF+NL ++ ++     +   +   E        G  V +E
Sbjct: 87  QIGEYLVAQVEEITAFNVVKGFLNLVVADAFYMNAFAE--IQATENFGKTPEAGKAVMVE 144

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N   P+H+GH R  ++G +++ ++  +G +V +   IND G  I    L+ + RY 
Sbjct: 145 YSSPNTNKPLHLGHVRNVLLGYSVSEIIKAAGSKVYKTQIINDRGIHICKSMLA-WERYG 203

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI-- 244
                  + L      G Y          +Y+  L +         +K+  +  ++K   
Sbjct: 204 NGETPESTGLKGDKLVGNYYVKFESVFQKEYTKWLTSDEGLSKFQELKETQLDKILKEVV 263

Query: 245 -IRDDLKALNIQHDIFISEDDF-----------HRGDPSPIRDIIDNLARQG-------- 284
            I      LN    I +SE+D            + GD S +      + R+         
Sbjct: 264 SIESKDVKLNKHLAIEVSEEDLRKGFKKFFKNQYFGDYSEVGQAAKEMLRKWEAGDAETV 323

Query: 285 --------YVYEGILPPPKSKTT----------------QKCDMDRKQLLFRSTMVG--- 317
                   +VY+G     K+                      +   K+ +F     G   
Sbjct: 324 ALWKKMNQWVYDGFEVTYKNIGVDFDSYYYESNTYLLGKDNIEEGLKKGVFERDPDGSVW 383

Query: 318 -----DDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEA 369
                D +DR  +L++DG+  Y   D+     + +   D   MIY +G++   + + L  
Sbjct: 384 CDLTEDGLDRKIVLRADGTAVYMTQDIGTAIQRVKDHPDVGGMIYTVGNEQDYHFQVLFL 443

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------ 417
           +   +    A+    L   +     G   KM  R G  +    +++EV            
Sbjct: 444 ILKKLGYDWAENLFHLSYGMVDLPSG---KMKSREGTVVDADDLINEVAATAGEISEELG 500

Query: 418 -----------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                            G  ++++ +L     + + FD  K     + N   ++QY Y R
Sbjct: 501 KLDGYTDEEKKALYKTIGLGALKYYILKVDPKKRILFDP-KESVDFQGNTGPFIQYTYVR 559

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            ++I R+AK++      +           +    E +LI  + +YP  I+ A   + P  
Sbjct: 560 IQAILRKAKELNVPASVEGA--------RDLHPKEKELIKLVQDYPATIQLAAAQKSPAI 611

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +A Y YDL   ++  +       +++ +  +N      R+ L   V  +I S   ++G++
Sbjct: 612 IANYTYDLVKEYNSFFQ------QVQILGTDNVADQSFRVALSKEVGQVIESAFGLLGID 665

Query: 581 SPNEM 585
            P  M
Sbjct: 666 VPERM 670


>gi|126310309|ref|XP_001366951.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 578

 Score =  313 bits (802), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 124/623 (19%), Positives = 228/623 (36%), Gaps = 93/623 (14%)

Query: 7   FSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL------SRPLGL 59
           F   + + L   +D   +   K +  + I   +         +   +L      S+P   
Sbjct: 5   FRRSIASQLSRVLDLPPENLIKSISAVPI--SKKEEVADFQLSVHSVLECSNGHSKP--- 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLI 117
           D    A  +  ++K D  V  +   G G +N  ++   L K  L  +   GI YG ++ +
Sbjct: 60  DIQVQARRLAEKLKCDTVVSEIS-TGPGTVNFKINRELLTKTVLQQVFEDGINYGLKSEL 118

Query: 118 GKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             G    KV +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y  D G Q 
Sbjct: 119 FSGLPQKKVVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYFGDWGMQF 178

Query: 175 NTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWL 230
             L        Y++ L +N        Y  V  +    E  +K + E    L   +++ L
Sbjct: 179 GLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDENVEKSAREFFHQLEAGDKQAL 238

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + + +   ++ K      K L +  D +  E  F+R      R+++  L ++G +    
Sbjct: 239 SLWQKFRDLSI-KEYVQIYKRLGVHFDEYSGES-FYREKS---REVLRLLDKKGLLQRTK 293

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349
                   + K D      + R              S+G+  Y   DLA    +  +  F
Sbjct: 294 KGTAVIDLSGKGDPSLSCTVMR--------------SNGTSLYATRDLAAAIDRMNKYNF 339

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D+MIYV       + +++  +   +  + A       E  R    G+   M  R GD   
Sbjct: 340 DSMIYVTDKGQQNHFQQVFQILKLMGFEWA-------ERCRHIPFGVVQGMKTRRGDVTF 392

Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
           L  V++E                           VG  ++              F++ +V
Sbjct: 393 LEDVINETRLRMLENMAFSKTSKELENPHETAERVGLAALIIQDFKGHLLSDYKFNWDRV 452

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
             QS+ +   ++QY +AR  S+            F+      I      D   + ++ HL
Sbjct: 453 -FQSRGDTGVFLQYTHARLSSLEE---------TFECGHLRNINATCLQDPQSISILQHL 502

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             Y  V+  ++   +P  +  YL  L+ +            +   ++    ++   RL L
Sbjct: 503 LRYDEVLFKSSQDLQPRHIVSYLITLSHL-------TAVAHKTLQIKGRLPEVAEARLHL 555

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV S++ +G+ ++G+   + M
Sbjct: 556 FKAVRSVLANGMKLLGITPVSRM 578


>gi|310797950|gb|EFQ32843.1| arginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 633

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 121/649 (18%), Positives = 228/649 (35%), Gaps = 119/649 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS----RPLGLDPL 62
           + S + + L ++     VEK I+    ++  +    G       M+L+    R  G  P 
Sbjct: 33  YRSHITSLLHDVT---GVEKTIIYN-ALQWTQSLDKGD------MVLAVPALRIKGKKPA 82

Query: 63  TIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVS-----------GI 110
            +    + +    P ++  + +    F+  +     L ++L   V +           G+
Sbjct: 83  ELTAEWLEKFPESPLIEKPISLQNGSFLQFWFKAGPLSQLLIPQVRNRGQAFGKNPNNGL 142

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +   +      K+ +EF S N   P H GH R  ++G  +A+L   +G++VTR  Y+ D 
Sbjct: 143 KNPEDPSQGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFIANLYDGAGWDVTRINYLGDW 202

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---------------KHVGKELAD 215
           G Q   LAL       +     D   P  +   VY+               K    E   
Sbjct: 203 GKQYGLLALGFERFGSEDALKAD---PINHLYEVYVKINAAMSDEKEQIAAKEQAGEDVA 259

Query: 216 KYSSELLNFPEEKWLPIVK--DYSVQAMMKIIR--------DDLKALNIQHDIFISEDDF 265
                 L+    K+   +   D +  A  +  R        +    LNI  D +  E   
Sbjct: 260 ALKDNSLDEQARKYFKAMVAGDEAAVAQWRRFRDLSITRYKETYARLNIHFDEYSGESQV 319

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              D       + ++              +S+     D  +          G  ++RP++
Sbjct: 320 SEQDMEAAAKKLQDMN----------ISEESEGAVIIDFSKH----IPGKAGKSLERPII 365

Query: 326 -KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            K DG+  Y   D++    + ++  FD+MIYV+ S    ++K+L  +   +   +     
Sbjct: 366 RKKDGTALYLTRDISELLHREKKYNFDHMIYVVASQQDLHLKQLFKIIELMGYPETAKKC 425

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-------------------------- 417
                      GM + MS R G    L  ++ +V                          
Sbjct: 426 QHINF------GMVLGMSTRKGTVKFLDDILRDVGDKMHEVMKKNETKYSQVENPEATAD 479

Query: 418 --GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G  SV    +  K      FD   +    + +   Y+QYA+AR  SIFR+A     ++
Sbjct: 480 ILGISSVMVQDMSGKRINNYKFDMDTMTSF-EGDTGPYLQYAHARLCSIFRKAGVPEEEV 538

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                           +   ++LI  +++YP V++N     EP  +  YL+ L  V    
Sbjct: 539 VKADLSL-------LTEKHAIELIRVVSQYPDVVQNTLKTLEPTTVLTYLFRLTHVVSSS 591

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +   R       +  +  ++   RL L  +  +++ +G+ ++G+     
Sbjct: 592 YDVLR-------IVGSEPEIQKARLALYSSARTVLYNGMRLLGLSPVER 633


>gi|156084636|ref|XP_001609801.1| arginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797053|gb|EDO06233.1| arginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 581

 Score =  313 bits (802), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 128/624 (20%), Positives = 236/624 (37%), Gaps = 106/624 (16%)

Query: 1   MYLFAD-FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG- 58
           M + A      ++  L     +  +++ + +  V+    +   G    N A+ L + +G 
Sbjct: 1   MKIVAQHVKDVIRAALNSCVGQKVLQEHLPNLSVV--SANPKFGDFQWNDAISLYKAIGS 58

Query: 59  ----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
                 P  +AEL+ + I       +V ++ +GF+ + LS  ++   +  +   G+   +
Sbjct: 59  TLQVGSPKELAELVKSHI-SSSTFSAVNVSPQGFLTVTLSKEFIEGEIRHLYKHGVSVPQ 117

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
               KG +V ++F S N    MHVGH R  ++G++L+ ++ F GY+V R  ++ D G   
Sbjct: 118 --APKGFRVAVDFSSPNIAKEMHVGHLRSTIIGESLSRILEFHGYDVLRINHLGDWGTHF 175

Query: 175 NTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWL 230
             L   +  ++   + N  + SD  + Y     L     E   +      LL   +E  +
Sbjct: 176 GMLVEYMLAKHPDFMTNVPSISDFTQFYKEAKALMDADAEFKARSRKRVVLLQSGDELSI 235

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVY 287
            + K      + +I   +   +    DI I    E  ++      I D+++ L  +  V 
Sbjct: 236 NVWK-----LLCQISEREFAKIYKMLDITIENCGESFYN----DMIPDVVNELKEKDLV- 285

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                          + +  Q +F S      V    +KSDGSY Y + DLA  + + + 
Sbjct: 286 --------------VESEGAQCVFTSVS---SVPLMAIKSDGSYGYDSTDLACIRYRIKT 328

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-----QINVLLCELVRLYRDGMPIKMS 401
            G   +IYV       +  ++   A      K      +I+ L   +V+   D    K  
Sbjct: 329 LGSKWLIYVTDVGQQEHFMKVFETARLAGWSKVDGQDIRIDHLGFGMVQ---DSSGNKFK 385

Query: 402 KRAGDFITLRHVVDE----------------------------------VGSDSVRFMML 427
            R+GD + L  ++DE                                  +G  +V++  L
Sbjct: 386 TRSGDTVKLITLLDEAVSRATVELESRIKARQEEGETEIDINVPEVAKVLGYGAVKYFEL 445

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +  +    F F  + +  + N   Y+ YAYAR   IF +A      L  +L        
Sbjct: 446 RQNIANNYKFSFDHMLD-PRGNTAIYLLYAYARICQIFHKAGIDPETLQPELLD------ 498

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                  E+ L  H+ + P V+   T      KLA ++Y L+  F   +       + + 
Sbjct: 499 --LVHPLEISLAKHILKLPAVLHQITADFLISKLADFVYALSVEFSSFY------KQCKV 550

Query: 548 VQANNRKLTMMRLQLVHAVASIIN 571
           +   N K    RL L HA  +++ 
Sbjct: 551 IGDPNEK---TRLLLCHATKTVMK 571


>gi|189191868|ref|XP_001932273.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973879|gb|EDU41378.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 646

 Score =  313 bits (801), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 127/668 (19%), Positives = 230/668 (34%), Gaps = 130/668 (19%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +  F  + S +   L ++     V+K I+    +       HG L    A+   R    D
Sbjct: 26  LNPFDIYRSHITELLSQVS---GVDKHII-YPTLAWTAKPEHGDLQ--LAVPALRQKKKD 79

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------G 109
               A+ +       P V+   +     I  +  P  L  ++  +V+            G
Sbjct: 80  MKAYAQELADAFPESPLVNKPIVTNTS-IGFFFKPETLTSLVVPMVIKSKDDYGFNKNFG 138

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           ++   +       + +EF S N   P H GH R  ++G  LA++   +G++V R  Y+ D
Sbjct: 139 LKNPVDPSSGAKTMIVEFSSPNIAKPFHAGHLRSTIIGGFLANIYERAGWDVVRMNYLGD 198

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNFPE 226
            G Q   LA+         LY N+ +L   P G+   +Y+K    +  +    + L    
Sbjct: 199 WGKQYGVLAIGF------DLYGNEEELVKNPIGHLYDIYVKVSNVQHQEAEEMKALKEEA 252

Query: 227 EKWLPIVKDYSVQA-------------------------------MMKIIRD-------- 247
            K     KD S Q                                + K  RD        
Sbjct: 253 AKLKEEGKDASEQENKIKKIEAEGIDEQARKYFKGMVDGEPKALGIWKRFRDLSIEKYKQ 312

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               LNI +D +  E          +      +  +G                 C     
Sbjct: 313 TYARLNIHYDDYSGESQV---KDESMELAAKIMWEKG----------------VCQDSEG 353

Query: 308 QLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
            ++   T     + + ++ K DG+  Y   D+     + E+  FD MIYV+ S    ++ 
Sbjct: 354 AVIVDLTPHSKKLGKAVIKKKDGTSLYLTRDIGAAIERVEKYHFDKMIYVVASQQDLHLA 413

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-------- 417
           +L  +   +  K       + E  +    GM + MS R G    L  ++ +V        
Sbjct: 414 QLFKIEELMGRKD------ISEKCQHINFGMVLGMSTRKGTAKFLDDILRDVGDKMHEVM 467

Query: 418 --------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                               G  +V    +  K      FD  ++    + +   Y+QYA
Sbjct: 468 RTNETKYAQVRDPEKTADTLGISAVMVQDMKGKRINNYTFDMDRMTSF-EGDTGPYLQYA 526

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR  SI+R+A D    L+ ++   +        +   ++L+  LA +P    N    QE
Sbjct: 527 HARLCSIYRKAVDADRSLE-EIDLASAADLSLLKEDKAVELVRQLASWPDTFVNTLKTQE 585

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +  YL+ +A      + H +       V  + + + + RL L  A   ++ +G+ ++
Sbjct: 586 PTTVLTYLFKMAHALSSSYDHLQ-------VVGSEKNVLVARLALYVAARQVLYNGMKVL 638

Query: 578 GVESPNEM 585
           G+     M
Sbjct: 639 GLSPVERM 646


>gi|261405352|ref|YP_003241593.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281815|gb|ACX63786.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 620

 Score =  313 bits (801), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 130/646 (20%), Positives = 235/646 (36%), Gaps = 98/646 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             S L+  + ++      +      I IE+P    HG  +TN AM L++ L   PL IAE
Sbjct: 6   IISSLQQAVNQVCEAYGTKLPESTPIRIEQPASMEHGDYATNVAMQLAKVLRKAPLQIAE 65

Query: 67  LIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           LI A ++ D        S  I   GF+NL +   Y       +                K
Sbjct: 66  LIQAELEQDASYKQLVRSTEIVAPGFMNLRIDWEYWASHQFEL----------PPAANEK 115

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + IE  S NP    H+GH R + +GDTL  LM   GYEV    YI+D G Q+    + + 
Sbjct: 116 IVIEHTSINPNKSAHIGHLRNSCIGDTLVRLMRKLGYEVEVHNYIDDLGNQLADTVVGLL 175

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQA 240
                  +    D     Y      +  +    ++ +E+L+  EE  + L  +     + 
Sbjct: 176 HTPLTKEHARFGDYCWDVYSSTNKAYEREPGLVQHRTEVLHALEEGNQNLSWIGLLVAER 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++K   +++K   I++D+ + E    R          + L      ++      + K   
Sbjct: 236 IVKEHLEEMKQFGIEYDLLVWESSIVR--EGFWASAFELLKNTPLFHQ----ETEGKLAG 289

Query: 301 KCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKY-------------- 345
              + +           D  +D+ L++S+G  TY A D+AY   KY              
Sbjct: 290 CWVLKQSGTEAGDEPESDHSIDKVLVRSNGILTYTAKDIAYHLWKYGVLSNDFVYKKFTD 349

Query: 346 ----------ER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVR 390
                     ER     D +I V+          ++     +    +  ++  +   +V 
Sbjct: 350 EVWTTSSHGEERTYGKADMVINVIDYRQQYPQAMVKQALEGLGFQQEAEKLRHVSYGVVS 409

Query: 391 L------------YRDGMPIKMSKRAGDFITLRHVVDEVGS------------------- 419
           L                    MS R G  I +  ++ +V                     
Sbjct: 410 LSPSAAADLGIDTSDGKASYAMSGRQGIGIKITELIHQVAKVIEDTRSDKNGLSSHAIAT 469

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            S+R+ +L       + FD  +  E S  N   Y+ Y+YAR  S+  +A++         
Sbjct: 470 ASIRYYLLRFALQTEVVFDLKQATEIS-GNTGVYLLYSYARALSVLNKAREAE------- 521

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +V  +    + +E  L+ H++ +   + +A     P  +  + Y+L S+F+  +S  
Sbjct: 522 VTPSVPARFPAMEKAEHALLRHISTWYDTLYSAGRDLSPSAICNFTYELCSLFNNFYSAC 581

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   ++A    L   R+ L     + +   L ++G+ +P+ M
Sbjct: 582 ------PILKAAEEML-QFRVWLTSLFKNTLGEALEVLGLPTPSRM 620


>gi|88802725|ref|ZP_01118252.1| arginyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781583|gb|EAR12761.1| arginyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 601

 Score =  313 bits (801), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 117/650 (18%), Positives = 234/650 (36%), Gaps = 114/650 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     +++K         + + K  +  +  +  R    G + T     + R    +
Sbjct: 1   MNIQNTIETKVKEGF------LALYKTEIPTVEFQATRKEFEGDI-TVVVFPMLRYKKGN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ I E +   +  +    + +   KGF+NL +  +      ++   +      +     
Sbjct: 54  PVQIGEDLGNYLVENITEITRYNVVKGFLNLVIDNAVYTTFFNTAYQNANFGFVSPKDDV 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+ S N   P+H+GH R  ++G  +A +   SG +V +   IND G  I    L+
Sbjct: 114 KAIMVEYSSPNTNKPLHLGHVRNNLLGYAVAEITKASGKKVYKTQIINDRGIHICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPE---------------GYYPG---VYLKHVGKELA----DKYS 218
            + +Y     +   + PE                YY      Y K +   +A    ++ +
Sbjct: 174 -WQKYAPNGSDGQKETPETTLNLELKKGDKLVGNYYVKFDQEYKKEIVHLIANGKTEEEA 232

Query: 219 SELLNFPEEKWLPIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFH 266
            +      E    ++K    D  + A+ K +            K + +  D    E + +
Sbjct: 233 KKEAPLLIEAQQMLLKWEAGDVRILALWKEMNSWVYSGFEITYKNMGVNFDTLYYESNTY 292

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                  +D++     +G  Y+                +   +    T  G D ++ +L+
Sbjct: 293 LLG----KDVVAQGIEKGVFYKK---------------EDGSVWCDLTDDGLD-EKIVLR 332

Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           SDG+  Y   D+     + +   D   M+Y +G++   + + L  +   +    +Q    
Sbjct: 333 SDGTAVYMTQDIGTAIQRVKDFPDVGGMVYTVGNEQDYHFQVLFLILKKLGFNWSQQLHH 392

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
           L   +     G   KM  R G  +    ++ E                            
Sbjct: 393 LSYGMVDLPSG---KMKSREGTVVDADELMQEMTDTAKEISEELGKLEGYSEHEKNALYK 449

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  ++++ +L     + + FD  K     + N   ++QY YAR +SI R+A       
Sbjct: 450 TIGLGALKYFILKVDPKKRILFDP-KSSVDFQGNTGPFIQYTYARIQSIVRKA------- 501

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +FD      +    +    E +L+  L  YP  I+ A  +  P  +A Y YDL   F+  
Sbjct: 502 NFDYSKVVAV----DLHEKEKELLKQLELYPATIQQAAASYSPAVIANYTYDLVKEFNSF 557

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +      +  +   +    + R+QL   VA  I S  +++G+E P  M
Sbjct: 558 YQN------VSILGEEDLDKKIFRVQLAKKVADTIKSAFSLLGIEVPERM 601


>gi|302683480|ref|XP_003031421.1| hypothetical protein SCHCODRAFT_68587 [Schizophyllum commune H4-8]
 gi|300105113|gb|EFI96518.1| hypothetical protein SCHCODRAFT_68587 [Schizophyllum commune H4-8]
          Length = 599

 Score =  312 bits (800), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 114/616 (18%), Positives = 221/616 (35%), Gaps = 74/616 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F  + +R+   L E    I +E+       ++  +           A+   R  G  P 
Sbjct: 25  VFDAYRTRIAQLLSEAL-PISLEQAYDG---VDYGKKGED----FTVALPRYRLPGK-PN 75

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS--------GIEYGR 114
            I   ++ + K D  + +V +  K F++  L+   + + +   V            EYGR
Sbjct: 76  EIGAKVIEKFKPDEFIAAV-VQDKAFLHFRLNTENMIRSVLEQVTDLTHNTPSKEPEYGR 134

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           N +GKG ++ IE+ S N     HVGH R  ++G  LA+L    G++V    Y+ D G Q 
Sbjct: 135 NELGKGKRLVIEYSSPNIAKSFHVGHLRSTIIGAFLANLYKAHGWDVVSLNYLGDWGTQF 194

Query: 175 NTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
             +A+    +  Q+ L  +        Y  +             +++     E+     +
Sbjct: 195 GLIAVGFEKYGSQEELEKDAIKHLFDIYVKINKDAEADPEVKAEAAKWFKRMEDGDEEAL 254

Query: 234 KDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K++ V   +  K   ++   LN+  D++  E    +     + D ++ L + G +     
Sbjct: 255 KNWRVWRELSVKKYAEEYSRLNVHFDVYTGESKVSKK---SMDDALERLEKMGLI----- 306

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFD 350
                      D      L             + K DG+  Y   D+     +YE   FD
Sbjct: 307 -----------DDHEGAKLVNLEAYKMGKA-VVRKKDGTSIYLTRDIGGAVERYEQYKFD 354

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRLY 392
            MIYV+ S    ++ +   V   +    A+                    V L +++R  
Sbjct: 355 RMIYVVSSQQDLHLAQFFKVLDLLEYPWAKNLVHINYGLVQGMSTRKGTVVFLDQIIREA 414

Query: 393 RDGMPIKMSKRAGDFITLRHVVD---EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              M  +M K    +  +    +    +G   V+   +  K      F++ ++K   + +
Sbjct: 415 ASVMHEQMQKNEEKYKAIEDPEETSLNIGITGVKIQDMQAKRINNYTFNWDRMKSF-EGD 473

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+ R  SI R+   + P           + Q +       +++  L  YP V+
Sbjct: 474 TGPYLQYAHVRLASIARKNPHLLPLPAPSQIDIATLVQSN----HAREIVFLLGSYPDVV 529

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A    EP  +  +L+ L  V    W        +      + +    RL +      +
Sbjct: 530 KTAMRTHEPSAIVTFLFRLCHVISSAWE------TVIVKGEEDIEKARARLWMFECTRDV 583

Query: 570 INSGLNIIGVESPNEM 585
           + + L ++ +     M
Sbjct: 584 VAAALRLLTISPLERM 599


>gi|311747338|ref|ZP_07721123.1| arginine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126579055|gb|EAZ83219.1| arginine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 596

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/639 (18%), Positives = 236/639 (36%), Gaps = 97/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       + + ++     I   +  L  + +   R    G  +        +     
Sbjct: 1   MNI----QESIISGIQLAFQNIYNHEVPLANLSLAPTRKEFEGTYTF-VVFPYLKVTQST 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A  I   +K +    + F   KGF+NL L+      +   +     E    L   G
Sbjct: 56  PENTANQIGEYLKANVPEVAGFNVVKGFLNLELNELIWLDVFQGLYAD--ESLGQLPSNG 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+ S N   P+H+GH R   +G ++A ++  +GYEV +   +ND G  I   ++ 
Sbjct: 114 QKVMVEYSSPNTNKPLHLGHLRNNFLGYSVAEILKANGYEVIKANLVNDRGIHICK-SMV 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----------------KHVGKELADKYSSELLNF 224
            + ++        S L   +  G Y                 K   +E A K +  LL  
Sbjct: 173 AYQKFGNGETPESSGLKGDHLAGKYYVIFDKEYKKEIVALKEKGYSEEEAKKNAPLLLEA 232

Query: 225 PEEKWLPIVKDYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E       KD  V ++ K +            + + +  D +  E D +       +DI
Sbjct: 233 QEMLRKWEAKDEEVISLWKQMNAWVYAGFDKTYQTMGVDFDKYYYESDTYLLG----KDI 288

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++   +    ++                +   +    +  G D ++ +L+SDG+  Y   
Sbjct: 289 VEEGLKNEVFFKK---------------ENGSVWVDLSGEGLD-EKLVLRSDGTSVYITQ 332

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+     KY+    D  +YV+G++   +   L  +   +          L   +     G
Sbjct: 333 DMGTADLKYDDFKIDKSVYVVGNEQDYHFDVLFKIMQKLGRPYGNGLYHLSYGMVDLPSG 392

Query: 396 MPIKMSKRAGDFITLRHVVDEV-----------------------------GSDSVRFMM 426
              KM  R G  +    ++ E+                             G  ++++ +
Sbjct: 393 ---KMKSREGTVVDADDLMQEMVDTAAKHTEELGKIDGFNKEQAAELYEILGLGALKYFL 449

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + F+  +   + + N   ++QY++AR +SI R+A  I  +     + +  + 
Sbjct: 450 LKVDPKKRMLFNPQE-SIEFQGNTGPFIQYSHARIKSILRKADQIGVE-----YQKPDLS 503

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             ++ + SE  LI  L ++ + I+ A     P  +A YL+DLA  ++  ++       L 
Sbjct: 504 GITKLEESESSLIFMLGDFKKKIKLAGDDLAPSIIAQYLFDLAKEYNRFYAD------LP 557

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++  +  +R+ L    A  IN G++++G++ P  M
Sbjct: 558 IFHESDNAIQALRVALSALTAKTINKGMSLLGIQVPERM 596


>gi|320035651|gb|EFW17592.1| arginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 714

 Score =  312 bits (800), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 116/661 (17%), Positives = 229/661 (34%), Gaps = 139/661 (21%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIAELIVA 70
           + ++ E+   I  ++       ++       G L     A+ +    G  P  +AE I A
Sbjct: 106 RAHIAELIGPIVGKEPEFVYTRLQWTNTLDKGDLLLAVPALQIK---GRKPTDLAEEIAA 162

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
           +      V+S   AG   +  +     L   +   ++            G+   R+    
Sbjct: 163 KFPQSDLVESPKAAGTH-LQFHFRAQPLIHTVIPSILENKATYGTNANIGLRDPRDPSKG 221

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA 
Sbjct: 222 KKRIVVEFSSPNIAKPFHAGHLRSTIIGGFLANLYRIMGWDVIKMNYLGDWGKQYGLLAN 281

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLK----------------------------- 207
                    +Y N+ +L   P  +   VY+K                             
Sbjct: 282 GY------KMYGNEEELLKDPINHLFEVYVKINKDVGEQEGPIKELKEQIKLKKEKGEDV 335

Query: 208 ------------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                           E A +Y   + +  E+  L + + +   ++ K  +     LNI 
Sbjct: 336 AALEKELETLVDASWDEKARRYFKSMEDGDEDA-LALWRRFRDLSIEKY-KQTYARLNID 393

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E    +   S +      +  +G                  +     ++   T 
Sbjct: 394 FDVYSGESQVKQESLSKVYQT---MQEKG----------------VSEDSEGAIIVDFTK 434

Query: 316 VGDDV--DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
            G        +++ DG+  Y   D+A    + E   FD M+YV+ +    ++ +L     
Sbjct: 435 HGAKKLGKAIVVRKDGTPLYLTRDIAAIFERDETFHFDKMLYVVAAQQDLHLAQLFKTVE 494

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSVRF 424
            +  K       L E  +    GM   MS R G    L  ++ +VG         ++V++
Sbjct: 495 LMGRKD------LAERCQHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMKKNAVKY 548

Query: 425 --------------------MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                                 +  K     +F+   +    + +   Y+QYA+AR  S+
Sbjct: 549 EQVQNPDETADTLGITSVMVQDMSGKRINGYEFNLEDMTSF-EGDTGPYLQYAHARLCSV 607

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A     ++D  +     +      ++  + L+  L+++P V+ N+    EP  +  Y
Sbjct: 608 NRKA-----EIDPSVLGSADLSL--LTESHAVDLVRLLSQWPDVVLNSMKTLEPTTIITY 660

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L+ +       +   +       V  +  +L   R+ L H    ++N+G+ ++G+     
Sbjct: 661 LFRMTHTLSSGYDTLK-------VVGSEPELKKARMALYHCARQVLNNGMRLLGLNPVER 713

Query: 585 M 585
           M
Sbjct: 714 M 714


>gi|329850270|ref|ZP_08265115.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840585|gb|EGF90156.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 608

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 123/633 (19%), Positives = 238/633 (37%), Gaps = 85/633 (13%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
            DF S+L     +       +        ++            N A+ +++    +P  +
Sbjct: 9   TDFRSQLTATAGDAFVAEGFDT---SAGRVQPSDRPDLADFQCNGALAVAKAAKANPREV 65

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A  I  R+  D  + S+ IAG GF+N  L+ + L     + +      G  ++    KV 
Sbjct: 66  ATRIQVRLNDDERLQSLEIAGPGFLNFKLNDAALSMR-GNAIAGDARLGAPVVAAKRKVI 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+F   N    MH+GH R AV+G++L  +M F G +VT + +  D G Q+  L + V   
Sbjct: 125 IDFGGPNVAKEMHIGHLRTAVIGESLKRIMRFLGDDVTGDAHFGDWGLQMGQLIVGVSEE 184

Query: 185 YQQALYNNDS---DLPE----------GYYP----GVYLKHVGKELADKYSSELLNFPEE 227
                Y +++     PE            YP     +  K +    A + ++  L     
Sbjct: 185 MPDLPYFDEAFSGPYPEASPVTLADLGRIYPKTSQRIKGKDLDFLNAARKATRELQQGRP 244

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +  + + + V +  + ++ D   L ++ D++  E D        +  +I +L  +G + 
Sbjct: 245 GYRALWQHFVVVS-REALKRDYALLGVEFDLWNGESDADPY----VEPMIADLEAKGLLV 299

Query: 288 EG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK- 342
           +     ++   +   T+K  ++   ++     V        + S+GS  Y   D+A    
Sbjct: 300 DDQGARVVHVARPGETRKKKLEDGSVV----EVPSPPPLLAVSSEGSAMYGTTDVATILQ 355

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMS 401
            K E   D  +YV+    + + +++   A       + Q+       V    DG P K  
Sbjct: 356 RKTEIQPDLYLYVVDQRQAEHFEQVFRTAYLAGYAVEGQLEHAANGTVN-GPDGTPFK-- 412

Query: 402 KRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNS 432
            R G  + L  +V E                             V   +++F  L     
Sbjct: 413 TRDGGTLKLHELVSEAVEKAVARLHEQKLGEDLSVAEFNATAHKVAVAALKFAELSNHRL 472

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               FD  +     +     Y+ Y   R +SI R+A +        L P  ++  E    
Sbjct: 473 TNYIFDLDR-FMTFEGKTGPYLLYQAVRMKSILRKAGEQG------LVPGAIVVGEQ--- 522

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
            +E +L++ L  +   +    + + P  LA ++Y LA  F   ++          +  ++
Sbjct: 523 -AERELVLLLDGFDGALRETYLKRAPNILADHVYRLAQAFSKFYAAC------PVLVGDD 575

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + + RL LV  V   +  GL+++G+ +P +M
Sbjct: 576 EAVKISRLGLVQVVLKQLELGLDLMGLSAPGQM 608


>gi|313680442|ref|YP_004058181.1| arginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313153157|gb|ADR37008.1| arginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 606

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 133/639 (20%), Positives = 244/639 (38%), Gaps = 96/639 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L+  + +   ++ V +     I ++       G   T  A  L+R L   P  IA 
Sbjct: 4   VKAPLQRAVAQALERMGVSE--PPEIDVQETPADKPGDYGTPVAFQLARVLRKAPPRIAA 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  RI+    V  V + G G++N +L P++L +       +          +G KV +E
Sbjct: 62  ELAERIEPPEGVARVEVVG-GYVNFFLDPAWLAR-------AAARPVEPAPKQGGKVLVE 113

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S NP   +HVGH R   +GD +A ++ F+G  V    YI+D G Q    A S+F    
Sbjct: 114 HTSVNPNKELHVGHLRNVALGDAIARILDFAGRRVEVLNYIDDTGRQ---SAESLFALEH 170

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMM 242
             L  + +   + +    Y++ + +E+ D+ +   L       L  ++       ++ ++
Sbjct: 171 YGLTYDGAKKYDHWVGEAYVR-LHREMEDEEAKARLEPAIRAVLHRLEAGELRGEIEKLL 229

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               + +  LN ++D+ + E D  R     ++  +  L +  YV      P + K     
Sbjct: 230 TAQLETMWDLNAEYDVLVWESDLVR--EGLLQRALALLEQTPYV----SRPTEGKYAGAL 283

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--------------- 347
            MD    +       +D    LL+SDG+ TY A D+A+   K                  
Sbjct: 284 VMDTSAFI----EGMEDPYLVLLRSDGTATYTAKDIAFQFWKMGLLEGLRFRPFTRQPSG 339

Query: 348 ----------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                                I V+    S   + L+A   A                 +
Sbjct: 340 RELYTSHPEGEPMPFGNAQETINVIDVRQSYPQQVLKAALEAAGRHDLAEGAYHLAYETV 399

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMM 426
             +G P  +S R G  +++  V++E                         VG  +VRF M
Sbjct: 400 LLEGRP--LSGRKGHTVSVDEVLEEAVRRARAVIAEKNPGLENADAVARMVGIGAVRFAM 457

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +  +  + +DF + +     + +   Y+QYA+AR  SI R+A+                P
Sbjct: 458 VKTEPKKQIDFRWDQALSF-EGDAAPYLQYAHARAASILRKAEAEG---------LADAP 507

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                   E++L   L  +   ++ +   + P+ LA YL DLA+ ++ +++   +     
Sbjct: 508 DFDRATPYEVELAKVLLRFEESVQKSAQLKTPHVLAQYLLDLAAAWNAYYNAKEDGRPAT 567

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V      L  +RL LV  +   + +GL ++G+ +P  M
Sbjct: 568 PVLTAPEGLRGLRLALVRRLKQTVATGLGLLGIGAPEAM 606


>gi|149280422|ref|ZP_01886542.1| arginyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149228836|gb|EDM34235.1| arginyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 591

 Score =  311 bits (798), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/639 (20%), Positives = 245/639 (38%), Gaps = 102/639 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      S  +K  +K++  +  V + +L+   I+  R    G ++      + R     
Sbjct: 1   MNFI--ISEAVKG-IKQLYNE-DVAEGLLN---IQDTRKEFEGQVTI-VVFPIVRFSKKS 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P      + A +  +    + F   KGF+NL +   Y   + ++ ++S   +       G
Sbjct: 53  PEQTGNDLGAYLLENVKEVTAFNVVKGFLNLSIDHEYWLNLFNTKLLS--PHYGTFPSNG 110

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +E+ S N   P+H+GH R  ++G ++A L+  SG EV +   +ND G  I    L+
Sbjct: 111 RKVMVEYSSPNTNKPLHLGHVRNNLLGYSVAELLKASGSEVFKVNLVNDRGIHICKSMLA 170

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVK-- 234
            +  +        S L   +  G Y     K   KE+    +        +K  P++K  
Sbjct: 171 -WQNWGNGETPASSGLKGDHLVGKYYVIFDKEYKKEIDALKADGQTEEEAKKNAPLIKAA 229

Query: 235 ----------DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     D +V  + K++            K L +  D +  E + +       +D 
Sbjct: 230 QAMLLAWETGDTAVIDLWKMMNGWVYDGFEVTYKNLGVDFDKYYYESNTYLLG----KDS 285

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++    +G  ++                    +    T  G D  + +L++DG+  Y   
Sbjct: 286 VEEGLAKGVFFKKP---------------DGSVWIDLTEDGLD-QKLVLRADGTSVYITQ 329

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           DL   + KY+    D  IYV+G++   + K L  +   + +  A+    L   +     G
Sbjct: 330 DLGTAQMKYDDFNMDESIYVVGNEQDYHFKVLFLILDKLGKSWAKGLYHLSYGMVDLPSG 389

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMM 426
              KM  R G  +    ++ E                             +G  ++++ +
Sbjct: 390 ---KMKSREGTVVDADDLIAEMVATAKEKTEALGKVDHFSEEEKSTLYYNIGMGALKYFL 446

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L  +  + L FD  +  +  + N   ++QY +AR +S+  +A        FD        
Sbjct: 447 LKVEPKKRLLFDPSESIDF-QGNTGPFIQYTHARIKSLLTKAGHTVGIQGFD-------- 497

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +      +EL +I+ L ++P  I  A  A  P  LA Y+Y++A +F+  +          
Sbjct: 498 RHFALTETELDMIILLDKFPAEITAAAAAFSPATLANYVYEVAKLFNKFYHE-----VPP 552

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  + +L   RL L    A +I SG+ I+G+E P  M
Sbjct: 553 IIKEEDAQLQHYRLNLSWVTAHVIKSGMRILGIEVPERM 591


>gi|219684333|ref|ZP_03539277.1| arginyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672322|gb|EED29375.1| arginyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 585

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 126/614 (20%), Positives = 233/614 (37%), Gaps = 72/614 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59
           +       +KN +  I   + + K I LD+I I  ++P     G +S      LS+ L L
Sbjct: 1   MTKSVKEDIKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLEL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIG 118
              TI+E I+  +K       +   G  ++N+ +    Y+   +  +      YG +   
Sbjct: 60  PIATISEEIIKTLKAKY---EIKAMGP-YLNIKIPRKEYINNTIQMVNAQKDSYGTSKYL 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I    
Sbjct: 116 DNKKIILEFSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSM 175

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIV 233
           L+ + ++   +    +     +  G +           E A+K   +LL   E+K    +
Sbjct: 176 LA-YKKFGNDITPEKAFKKGDHLIGEFYIEYNKYSQENENAEKEIQDLLLKWEQKDANTI 234

Query: 234 KDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K +        + I++  K  NI  D    E +      + + + +     +G+ Y+   
Sbjct: 235 KLWEKLNKWAIEGIKETYKITNISFDKIYLESEIFEIGKNVVLEGL----EKGFCYKRED 290

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFD 350
                      D   +              + L++S+G+  Y   DL     +  E  FD
Sbjct: 291 GAICIDLPSDSDEKAEA---------KAKQKVLIRSNGTSIYLTQDLGNIAIRTKEFNFD 341

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIYV+GS+   + K L  V+  +   K +  + L   +    DG   KM  R G+ I  
Sbjct: 342 EMIYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLIDG---KMKSREGNVIDG 398

Query: 411 RHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +++ E                         +   ++ + +L     + + F+  K    
Sbjct: 399 DNLISELIESIMPEITQKIDNKESAQKNALNIALGAIHYYLLKSAVHKDILFN-KKESLS 457

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QY  AR  SI  +   +   +         I  E      E ++I  ++E 
Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPI------IKKINFELLKHEKEWEIIKIISEL 511

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              I  A     P  LA Y Y LA  F  ++         + +  NN  LT  R++ + A
Sbjct: 512 EETIIKAAKDLNPSILANYSYSLAKHFSAYYQEA------KVIDINNTDLTAARIEFLKA 565

Query: 566 VASIINSGLNIIGV 579
           +   I + ++++ +
Sbjct: 566 ILQTIKNCMHLLNI 579


>gi|156052483|ref|XP_001592168.1| arginyl-tRNA synthetase [Sclerotinia sclerotiorum 1980]
 gi|154704187|gb|EDO03926.1| arginyl-tRNA synthetase [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 686

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 127/647 (19%), Positives = 234/647 (36%), Gaps = 103/647 (15%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +   + + + + L EI     VE  I+ R  +        G +         R  G  P
Sbjct: 80  NVVDIYRAHITSTLTEIT---GVESTIIYR-ALAWTNTLDKGDIVLPV--PALRVKGKKP 133

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRN----- 115
             +AE   A+    P V      G  ++  +     L ++L  +I+  G  +G N     
Sbjct: 134 NELAEEWAAKYPESPLVHKPTTNGV-YLQFFFKADKLNELLIPTIIRQGSNFGENKYLGL 192

Query: 116 -----LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
                      K+ IEF S N   P H GH R  ++G  L++L A  G+ VTR  Y+ D 
Sbjct: 193 VDPEDPSKGQKKIVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAAVGWNVTRVNYLGDW 252

Query: 171 GAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK---------------------- 207
           G Q   LAL    +  ++AL  +    P  +   +Y+K                      
Sbjct: 253 GKQYGLLALGFDRYGDEEALKAD----PINHLFQIYVKINQDVKAEADKMAALEAEGKTD 308

Query: 208 ---HVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISE 262
              H+  E  D+ +        E     +  ++   +  +K  R+    LNI  D +  E
Sbjct: 309 EALHIKNEGLDEQARRYFKAMTENDENAIAQWARFRELSIKRYRETYARLNIHFDDYSGE 368

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                          + +   G   E +    +S+     D  +         +G  + +
Sbjct: 369 SQVKA----------EVMEETGKKMEEMKIAEESQGAMIVDFTKHV----PGKIGKGLGK 414

Query: 323 PLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-- 378
            ++K  DG+  Y   D++    + E+  FD MIYV+ +D   ++++L  +   +  K+  
Sbjct: 415 AIVKRRDGTALYLTRDISELLQRKEKYDFDQMIYVVATDQELHLQQLFKIIELLGYKELR 474

Query: 379 AQINV-----------------LLCELVRLYRDGMPIKMSKRAGDFITLRHVV---DEVG 418
            +                     L +++R   + M   M K    +  +   +   D +G
Sbjct: 475 DKCQHINFGLVHGMSTRRGTVKFLDDILRDVAEKMHEVMQKNEAKYEQIADPLATSDILG 534

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             SV    +  K      F+   +    + +   Y+QYA+AR  SI R+A     ++   
Sbjct: 535 ISSVMVQDMSGKRVNGYTFNMDTMTSF-EGDTGPYLQYAHARLCSITRKAALTAEEI--- 590

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +     LI  L++YP V++N     EP  +  YL+ +  V    + H
Sbjct: 591 ----ASADLSLLTEIHAQNLIRTLSQYPDVVQNTVKTLEPTTILTYLFKMTHVLSSSYDH 646

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R       +  + +++   R+ L  A   ++ +G+ I+G+     M
Sbjct: 647 LR-------IMGSEKEVMKARMALYDAARVVLYNGMRILGLSPVERM 686


>gi|219685128|ref|ZP_03539948.1| arginine--tRNA ligase [Borrelia garinii Far04]
 gi|219673224|gb|EED30243.1| arginine--tRNA ligase [Borrelia garinii Far04]
          Length = 585

 Score =  311 bits (796), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 125/614 (20%), Positives = 233/614 (37%), Gaps = 72/614 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59
           +       +KN +  I   + + K I LD+I I  ++P     G +S      LS+ L L
Sbjct: 1   MTKSVKEDIKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLEL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIG 118
               I+E I+  +K       +   G  ++N+ +    Y+   +  +      YG +   
Sbjct: 60  PIANISEEIIKTLKAKY---EIKAMGP-YLNIKIPRKEYINNTIQMVNAQKDSYGTSKYL 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I    
Sbjct: 116 DNKKIILEFSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSM 175

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIV 233
           L+ + ++   +    +     +  G +           E A+K   +LL   E+K    +
Sbjct: 176 LA-YKKFGNDITPEKAFKKGDHLIGEFYIEYNKYSQENENAEKEIQDLLLKWEQKDANTI 234

Query: 234 KDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K +        + I++  K  NI  D    E +      + + + +     +G+ Y+   
Sbjct: 235 KLWEKLNKWAIEGIKETYKITNISFDKIYLESEIFEIGKNVVLEGL----EKGFCYKRED 290

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFD 350
                      D   +              + L++S+G+  Y   DL     +  E  FD
Sbjct: 291 GAICIDLPSDADEKAEA---------KAKQKVLIRSNGTSIYLTQDLGNIAIRTKEFNFD 341

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIYV+GS+   + K L  V+  +   K +  + L   +    DG   KM  R G+ I  
Sbjct: 342 EMIYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLIDG---KMKSREGNVIDG 398

Query: 411 RHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +++ E                         +   ++ + +L     + + F+  K    
Sbjct: 399 DNLISELIESIMPEITQKIDNKESAKKNALNIALGAIHYYLLKSAVHKDILFN-KKESLS 457

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QY  AR  SI  +   +   +         I  E      E ++I  ++E 
Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPI------IKKINFELLKHEKEWEIIKIISEL 511

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              I  A     P  LA Y Y LA  F  ++        ++ +  NN  LT  R++ + A
Sbjct: 512 EETIIKAAKDLNPSILANYSYSLAKHFSAYYQ------EVKVIDINNIDLTAARIEFLKA 565

Query: 566 VASIINSGLNIIGV 579
           +   I + ++++ +
Sbjct: 566 ILQTIKNCMHLLNI 579


>gi|150025554|ref|YP_001296380.1| arginyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166232786|sp|A6GZP8|SYR_FLAPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|149772095|emb|CAL43571.1| Arginine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 601

 Score =  310 bits (795), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 111/650 (17%), Positives = 229/650 (35%), Gaps = 114/650 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP---- 56
           M L    +  +K  + ++          +++I  +  R    G + T     L +     
Sbjct: 1   MSLQEILNPSIKTAIHQLF------DLTIEKIEFQSTRKEFDGDI-TMVIFPLLKLIKTP 53

Query: 57  ------LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110
                   L+P  +   I   +  +      F    GF+N+ ++  Y     ++I     
Sbjct: 54  QATPNGAKLNPADLGNKIGNYLVENVAQVEAFNVVSGFLNIVIANDYYINFFNTIKTDAQ 113

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
               +       + +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND 
Sbjct: 114 FGFVSPSEHDKAIMVEYSSPNTNKPLHLGHVRNNLLGYSVAEIIKASGKKVYKTQIINDR 173

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G  I    L+ + ++  +     S L      G Y     K    + +  +L    E+  
Sbjct: 174 GIHICKSMLA-WQKFGHSETPETSGLKGDKLVGKYYVAFDKAYKVEIAELMLQGKTEEEA 232

Query: 231 PIVK----------------DYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFH 266
                                 +V A+ K +            K L +  D +  E + +
Sbjct: 233 KKQAPIIIEAQQMLLDWEAGKPAVMALWKTMNQWVYDGFATTYKNLGVNFDSYYYESNTY 292

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                  ++++     +G   +                    +    T  G D  + +L+
Sbjct: 293 LLG----KEVVQIGLDKGVFEKDP---------------DGSVWIDLTQDGLDR-KIVLR 332

Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           SDG+  Y   D+     + +   D   M+Y +G++   + + L  +   +    A     
Sbjct: 333 SDGTAVYMTQDIGTAIQRVKDFSDVGGMVYTVGNEQDYHFRVLFLILKKLGFDWASSLYH 392

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
           L   +     G   KM  R G  +    +++E                            
Sbjct: 393 LSYGMVELPSG---KMKSREGTVVDADDLMEEMTSTAQKLSEDLGKLESYSEEEKAILYK 449

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  ++++ +L     + + F+  +  + +  N   ++QY YAR +SI R+A       
Sbjct: 450 TIGLGALKYYILKVDPKKSMMFNPEESVDFA-GNTGPFIQYTYARIQSILRKA------- 501

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +FD+     +   ++    E +LI  +  YP VI++A     P  +A Y+YDL   ++  
Sbjct: 502 NFDI----TVTISTKLHPKEKELIKQIEMYPEVIQHAAANHSPALIANYIYDLVKEYNSF 557

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        +  +   +    + R+QL   VA  I +   ++G++ P  M
Sbjct: 558 YQ------TVSILGEEDNDKKVFRVQLSKKVADTIKTAFTLLGIDVPERM 601


>gi|119953378|ref|YP_945587.1| arginyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782944|sp|A1R025|SYR_BORT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119862149|gb|AAX17917.1| arginyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 584

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 128/619 (20%), Positives = 243/619 (39%), Gaps = 75/619 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  D  +++   +KE+  K  +    +  I++++P     G LS       S+ L L   
Sbjct: 5   IKKDLENKISKTIKELALKQNITLDKI-NIIMKKPPKSELGDLSI-LIFEFSKILKLSTS 62

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121
            I E I+ +I       S+      ++N+  +   Y++ I+  +     +YG N + K  
Sbjct: 63  VIIEEIIKQIGKKYTTKSM----GAYLNIKFNRKEYIKDIIKKVNEQKEKYGINNVLKNK 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ IEF S N   P+HVGH R  ++G++L+ ++  SG +VT+   IND G  I    L+ 
Sbjct: 119 RIIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGGQVTKINLINDRGTHICKTMLA- 177

Query: 182 FWRYQQALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSE-------LLNFPEEKWLPIV 233
           + ++        S     +  G  Y+K+      +K + +            +E+ + + 
Sbjct: 178 YKKFGNNTTPELSLKKGDHLIGDFYVKYNEYAKNNKMAEDEIQQLLCKWEEGDEETVKLW 237

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K  +  A+ + I++  K  NI  D    E +  +      R+II     +G  Y+     
Sbjct: 238 KKLNKWAI-EGIKETYKLTNITFDKIYLESEIFKIG----REIILQGLEKGLCYKREDGA 292

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNM 352
                  + +    Q             + LL+++G+  Y   DL      K E  FD M
Sbjct: 293 ICINIPIETNEMTDQKF---------KQKVLLRANGTSIYLTQDLGNILTRKNEFDFDEM 343

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IYV+GS+   + K L  VA  +   K   +  L   +V L       KM  R G  I   
Sbjct: 344 IYVVGSEQIHHFKTLFYVADKLGITKENNLVHLSYGMVNLPTG----KMKSREGHVIDAD 399

Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ +                         +   ++ + +L     + + F+  +    +
Sbjct: 400 NLIHDLSESTMIEIKKRHSNEQDSKKIALNISLGAIHYYLLKTAIHKDILFNKEESLSFT 459

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   Y+QY  AR  SI  +  ++         P   I  +   + +E  +I  ++E+ 
Sbjct: 460 -GNSGPYIQYVGARINSILDKYDELN-------LPSKNINFDLLINENEWAIIKIISEFE 511

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             I  A   + P  +  Y Y LA  F  ++         + +  +N +LT  R  L  AV
Sbjct: 512 EYIIKAAKDRNPSIIVNYSYLLAKSFSAYYQD------TKIIDKDNPELTHARTDLSKAV 565

Query: 567 ASIINSGLNIIGVESPNEM 585
              I + ++++ +    +M
Sbjct: 566 LQTIKNCMHLLNIPYMKKM 584


>gi|11271708|pir||T49760 probable cytosolic arginine-tRNA ligase [imported] - Neurospora
           crassa
          Length = 647

 Score =  310 bits (794), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 124/645 (19%), Positives = 240/645 (37%), Gaps = 100/645 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L   + + L N L E+     V+  I+    +        G ++     +  R  G  
Sbjct: 34  LNLMDLYRAHLANVLSEVT---GVDTAII-YPNLGWTSGLDKGDIALPVPSL--RVKGKK 87

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-----------VSG 109
           P  +A+   A+      + +     +  ++ ++  S L   +  +V             G
Sbjct: 88  PDELAQEWAAKFPDTDPLFTKPTVSQIHLSFFVKASPLVNAVIPMVQHKGAEYGFNKADG 147

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           ++  ++      ++ +EF S N   P H GH R  ++G  L++L A +G++V R  Y+ D
Sbjct: 148 LKDPKDPSKGQKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWDVIRINYLGD 207

Query: 170 AGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----------- 217
            G Q   LAL+   +  ++AL  +    P  +   +Y++   +  A+K            
Sbjct: 208 WGKQYGLLALAYEKYGDEEALQKD----PINHLFQLYVRINTEMTAEKEELTKRKEAGED 263

Query: 218 ----SSELLNFPEEKWLPIV--KDYSVQAMMKIIR--------DDLKALNIQHDIFISED 263
                +  L+    ++   +  +D    AM K  R        D    LNI  D +  E 
Sbjct: 264 VSALEANSLDEQARRYFKKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHFDEYSGES 323

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                  + + ++++                + K  Q  D             G  +++P
Sbjct: 324 QVSEEAMNKVGNLMEEKK----------ICKEDKGAQLIDFSE----LVPGKEGKRLEKP 369

Query: 324 LLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--A 379
           L++  DG+  Y   D++    ++E+  FD MIYV+ S    ++++L  +   +  K    
Sbjct: 370 LVRKRDGTALYLTRDISELLGRHEKYNFDKMIYVVASAQDLHLRQLFKIIELLGYKDIAD 429

Query: 380 QINV-----------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419
           +                     L +++R   D M   M K    +  +       D +G 
Sbjct: 430 KCQHINFGLVLGMSTRKGTVKFLDDILRDVADKMHEVMKKNENKYSQIEDPLATADVLGI 489

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            SV    +  K      F+   +    + +   Y+QYA+AR  SI R+A     +L    
Sbjct: 490 SSVMVQDMSGKRINNYTFNMETMTSF-EGDTGPYLQYAHARLNSIRRKAGVSDEEL---- 544

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                       +TS + L  H+A +P V++N     EP  +  YL+ L       +   
Sbjct: 545 ---ATADLSLLTETSAINLCRHMAGWPDVVKNTLKTLEPTTVLTYLFKLTHALSSSYDQL 601

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +       V  +  +L   RL L  AV +++ +G+ +IG+   + 
Sbjct: 602 Q-------VVGSEPELMKARLALYTAVQTVLANGMRLIGLSPVDR 639


>gi|157820403|ref|NP_001100113.1| probable arginyl-tRNA synthetase, mitochondrial [Rattus norvegicus]
 gi|149045596|gb|EDL98596.1| arginyl-tRNA synthetase-like (predicted) [Rattus norvegicus]
 gi|165971667|gb|AAI58745.1| Arginyl-tRNA synthetase 2, mitochondrial [Rattus norvegicus]
          Length = 578

 Score =  309 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 116/611 (18%), Positives = 224/611 (36%), Gaps = 86/611 (14%)

Query: 17  EIDCKIKVEKKILDRIVIERP--RDCAHGHLSTNAAMIL---SRPLGLDPLTIAELIVAR 71
           ++   + +  + L + +   P  +         +   +L   S    LD    A+ +  +
Sbjct: 12  QLSRVLALPPESLIKSISAVPVSKKEEVADFQLSVDSLLENNSHKSQLDTQDQAQRLAEK 71

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-SGIEYGRNLIG----KGTKVNIE 126
           +K D  V ++  AG   +N  ++ + L K +   V   G +YG            ++ +E
Sbjct: 72  LKCDTVVTAIS-AGPRTLNFKINRALLTKAVLQQVTEDGSKYGLKSELFSDLPQKRIVVE 130

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RY 185
           F S N     HVGH R  ++G+ +A+L    G++VTR  YI D G Q   L        Y
Sbjct: 131 FSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGLLGTGFQLFGY 190

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMM 242
           ++ L  N        Y  V  +    +   K + E    L   + + L + + +   ++ 
Sbjct: 191 EEKLQANPLQHLFDVYVQVNKEATDDKNVTKLAHEFFHRLELGDTQALALWQRFRDLSI- 249

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +      K L I  D +  E  F+R      +D++  L  +G + +          ++  
Sbjct: 250 EEYTQIYKRLGIYFDEYSGES-FYREKS---QDVLKLLDSKGLLQKTAKGNVVVDVSETG 305

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           D+     + R              SDG+  Y   DLA    + ++  FD MIYV      
Sbjct: 306 DLSSVCTVMR--------------SDGTSLYATRDLAAAIHRKDKYNFDTMIYVADKGQK 351

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            + +++  +   +  + A       E  +    G+   M  R G+   L  V++EV S  
Sbjct: 352 RHFQQVFQMLKIMGHEWA-------ERCQHVPFGIVKGMKTRRGEVTFLEDVLNEVQSRM 404

Query: 422 VRFMMLWRKNS---------------------------ELLDFDFCKVKEQSKENPVFYV 454
           ++ M   +                                  F + +V  QS+ +   ++
Sbjct: 405 LQNMASIKTTKKMENPRETAEKVGLAALIIQDFRGLLLSDYQFSWDRV-FQSRGDTGVFL 463

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY +AR  S+            F     N        +   + ++ HL  +  V+  A+ 
Sbjct: 464 QYTHARLCSLEE---------TFGCGYLNDFNVACLQEPQSVSILQHLLRFDEVLYTASQ 514

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             +P  +  YL  L+ +            +   V+ +  ++   RL L  AV S++ +G+
Sbjct: 515 DLQPKHIVSYLLTLSHL-------AAVAHKTLQVKDSPPEVAGARLHLFKAVRSVLANGM 567

Query: 575 NIIGVESPNEM 585
            ++G+    +M
Sbjct: 568 KLLGITPVCKM 578


>gi|194216244|ref|XP_001500381.2| PREDICTED: similar to Probable arginyl-tRNA synthetase,
           mitochondrial precursor (Arginine--tRNA ligase) (ArgRS)
           (Arginyl-tRNA synthetase-like) [Equus caballus]
          Length = 578

 Score =  309 bits (793), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 113/559 (20%), Positives = 213/559 (38%), Gaps = 83/559 (14%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIG----K 119
           A  +  ++K D  V  +   G+G +N  ++   L K  L  ++  G +YG          
Sbjct: 65  ATRLAEKLKCDTVVSEIS-TGQGTVNFKINRELLTKTVLQQVIEDGPKYGLKSELFSDLP 123

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L  
Sbjct: 124 QKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGT 183

Query: 180 SVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
                 Y++ L +N        Y  V  +    +   K + E    L   + + L + + 
Sbjct: 184 GFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKSAREFFQRLELGDMQALALWQK 243

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   ++ + +R   K L +  D +  E  F+R      ++++  L  +G + + I     
Sbjct: 244 FRDLSIEEYVRI-YKRLGVHFDEYSGES-FYREKS---QEVLKLLDSKGLLQKTI----- 293

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            K T   D+            GD      +++SDG+  Y   DLA    + ++  FD MI
Sbjct: 294 -KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYHFDRMI 343

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV       + +++  +   +    A       E  +    G+   M  R GD   L  V
Sbjct: 344 YVTDKGQKKHFQQVFQLLQIMGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFLEDV 396

Query: 414 VDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVKEQS 446
           ++E+    ++ M   +   EL                             F + +V  QS
Sbjct: 397 LNEIQLRMLQNMASIKTTKELENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRV-FQS 455

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + +   ++QY +AR  S+            F     N        +   + ++ HL  + 
Sbjct: 456 RGDTGVFLQYTHARLHSLEE---------TFGCGYLNDCNTACLQEPQSVSILQHLLRFD 506

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+  ++   +P  +  YL  L+ +            +   V+ +  ++   RL L  AV
Sbjct: 507 EVLYRSSQDLQPRHIVSYLLTLSHL-------AAVAHKTLHVKDSPPEVAGARLHLFRAV 559

Query: 567 ASIINSGLNIIGVESPNEM 585
            S++ +G+ ++G+     M
Sbjct: 560 RSVLANGMKLLGITPVCRM 578


>gi|226356003|ref|YP_002785743.1| arginyl-tRNA synthetase [Deinococcus deserti VCD115]
          Length = 633

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 137/647 (21%), Positives = 233/647 (36%), Gaps = 106/647 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  ++LK  ++     + +         I+       G   T AA  +++  G +P  IA
Sbjct: 26  DLKAQLKAAVEAAAQSMGIPV----DAAIQDTPASKPGDYGTPAAFQMAKSAGGNPAQIA 81

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   +++   +  V  AG  F+N +L  +         V   +E    +   G KV I
Sbjct: 82  AQLAQTVQLPTGIKRVEAAGP-FLNFFLDTA-------MFVRDVVENPFVMPSLGGKVVI 133

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFW 183
           E  S NP   +HVGH R  V+GD++A +   +G+ V  + YI+D G Q      A++ + 
Sbjct: 134 EHTSVNPNKELHVGHLRNVVLGDSMARIFRAAGHTVEVQNYIDDTGRQAAEALFAINHYH 193

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R        D  L EG Y  +       +L +  S+ +           V+      +  
Sbjct: 194 REWDGTQKYDHWLGEG-YVRLNADPAKPDLEEGISAIMHRLEAGVLRGEVEKVVTAHLQT 252

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R     L  ++D+   E D        +   ++ L    Y       P + K      
Sbjct: 253 CFR-----LGARYDLLNWESDVV--GSGFLTQAMNILESSRYT----SRPTEGKYAGAFV 301

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---------------- 347
           MD  + +       ++ +  L++SDG+  Y A D+ Y   K+                  
Sbjct: 302 MDVSEFM----PGLEESNVVLVRSDGTAMYAAKDIGYQFWKFGLFEGMKFKPFMTDPDGN 357

Query: 348 ------------------GFDNMIYVMGS--DHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                               D +I V+ S  DH   V R     A   EKK +   L   
Sbjct: 358 TVWTSAPDGEPDVQRRFGHADEVINVIDSRQDHPQTVVRSSLGVAGQYEKKDRSIHLSYA 417

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGS 419
            V L        +S R G  ++    +DE                            +G 
Sbjct: 418 FVTL----EGQTISGRKGIAVSADDAMDEAEKRALAALTELNPDLAAREDAAEIARRIGI 473

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++RF ML  + +  +DF + +       +   YVQYA  R  SI R+A++   +++   
Sbjct: 474 GAIRFAMLKAEPTRKIDFRWEQALAL-NGDTAPYVQYAAVRAASILRKAQEAGHNINGSG 532

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH- 538
              + +P         L L   +A  P V+  +     P+ +A Y  DLA+ F+  ++  
Sbjct: 533 ADWDALPDVD------LALAKMVARLPEVVAQSVRVHSPHVVAQYALDLATAFNAWFNAK 586

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R+      V  +   L   RL LV  +       L++IG+E P  M
Sbjct: 587 DRQGKPATNVLQSEPGLREARLALVGRLRRAFEETLDLIGIEVPAAM 633


>gi|328866635|gb|EGG15018.1| arginyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 570

 Score =  309 bits (791), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 120/627 (19%), Positives = 223/627 (35%), Gaps = 99/627 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAA-MILSRPLGL 59
           M +F           K+I   + +    + +  +E P++      +     +   + L  
Sbjct: 1   MSIFEQ------EISKQISAMVDIPADQVIQC-VEAPKNKDLADFALPLPKLNRFKKLAG 53

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRN--- 115
            P  +   +  +   +  +  V ++G  ++N  ++       I+  ++  G  +G +   
Sbjct: 54  APNQLVNELANKFVCNDLITKVSVSG-IYLNFNVNRLQQTSIIIKQVLAEGDRFGVSQAT 112

Query: 116 -LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
               +   + +EF S N   P H GH R  ++G+ L +L    GY+VT   Y+ D G Q 
Sbjct: 113 FDANQEKHIILEFSSPNIAKPFHAGHLRSTIIGNFLVNLHRAVGYKVTSMNYLGDWGKQY 172

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EE 227
             LA+       +     D   P  +   VY+K          + D   S        + 
Sbjct: 173 GLLAIGFERFGSEEELQKD---PIAHLFHVYVKINAQAETEPSIHDDARSYFKRMEDGDV 229

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             L I K +   ++ K  +     LN+  DI+  E     G         D L  +  V 
Sbjct: 230 DALAIWKRFRDVSIEKY-KAIYARLNVSFDIYSGESLMCDGMVHAY----DKLVEKNLVI 284

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE- 346
           E       S+  +  D++  +L                  DGS  Y   D+A    + E 
Sbjct: 285 E-------SEGAKVIDLEAYKLGKVLVKK----------KDGSTLYITRDIAAANYRKED 327

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV+ S    + ++L  +   +  + ++    +         GM   MS R G 
Sbjct: 328 LKFDKMIYVVASQQELHFRQLFKIVETMGYEWSKDLTHIGF-------GMVKGMSTRKGT 380

Query: 407 FITLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFD 438
            + L  +++E                            +   +V       K ++  DF+
Sbjct: 381 VVFLEDILNESKQIMGEVMKKNEAKYAEIEKPDEVADILAVSAVVIQDFSAKRNKDYDFN 440

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + ++    + +   Y+QYA+AR  S+ R+  ++  + D DL            +     L
Sbjct: 441 WDRMLSF-EGDTGPYLQYAHARLCSMERK-NNVAINKDADLG--------LLTEPEAYTL 490

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            V +  Y  V++ A    EP  +A YL++L                + +V+   + L   
Sbjct: 491 AVTIGRYGDVLQGALNNLEPNVVATYLFELCHAISS-------AHSVLYVKDREQNLAEA 543

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R  L H    I+ +GL I+G+     M
Sbjct: 544 RTALFHCAKIILGNGLRILGLVPLERM 570


>gi|10435519|dbj|BAB14608.1| unnamed protein product [Homo sapiens]
          Length = 578

 Score =  309 bits (791), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 118/620 (19%), Positives = 230/620 (37%), Gaps = 87/620 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLT 63
           F   +   L  +   +  E  I     +   +         +   +L +       D   
Sbjct: 5   FRRAIACQLSRVL-NLPPENLITSISAVPISQKEEVADFQLSVDPLLEKDNDHSRPDIQV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG- 120
            A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG ++ +  G 
Sbjct: 64  QAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGL 122

Query: 121 --TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N     HVGH R  V+G+ +A+L    G++V R  Y+ D G Q   L 
Sbjct: 123 PQKKIVVEFSSPNVAKKFHVGHLRSTVIGNFIANLKEALGHQVIRINYLGDWGMQFGLLG 182

Query: 179 LSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
                  Y++ L +N        Y  V  +    +   K + E    L   + + L + +
Sbjct: 183 TGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQ 242

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G + + I    
Sbjct: 243 KFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLKTI---- 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             K T   D+            GD      +++SDG+  Y   DLA    + ++  FD M
Sbjct: 294 --KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAVDRMDKYNFDTM 342

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV       + +++  +   +    A       E  +    G+   M  R GD   L  
Sbjct: 343 IYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFLED 395

Query: 413 VVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVKEQ 445
           V++E+    ++ M   +   EL                             F + +V  Q
Sbjct: 396 VLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSWDRV-FQ 454

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S+ +   ++QY +AR  S+            F     N        +   + ++ HL  +
Sbjct: 455 SRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLLRF 505

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+  ++   +P  +  YL  L+ +            +   ++ +  ++   RL L  A
Sbjct: 506 DEVLYKSSQDFQPRHIVSYLLTLSHL-------AAVAHKTLQIKDSPPEVAGARLHLFKA 558

Query: 566 VASIINSGLNIIGVESPNEM 585
           V S++ +G+ ++G+     M
Sbjct: 559 VRSVLANGMKLLGITPVCRM 578


>gi|326916235|ref|XP_003204415.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 576

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 132/627 (21%), Positives = 239/627 (38%), Gaps = 104/627 (16%)

Query: 7   FSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMI--------LSRPL 57
           F   + + L E +D   +   K +  + + R R  A      + A I        +++ L
Sbjct: 6   FRRSIAHQLSEVLDLAPENLMKSISAVPVSRKRHNA--DFQFSIASIEEGSSSDYIAQDL 63

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNL 116
            L     A+ +  ++K D  V  +   G G +N  ++   L K  L  ++  G  YG   
Sbjct: 64  QLR----AQKLAEKLKCDAVVSEIS-TGPGTVNFTINRELLAKTVLQQVLKDGTRYGTKS 118

Query: 117 ----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                    K  +EF S N     H+GH R  ++G+ +A+L    G+EVTR  Y+ D G 
Sbjct: 119 ELFSTVPKQKAVVEFSSPNIAKKFHIGHLRSTIIGNFIANLKVALGHEVTRINYLGDWGM 178

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKYSSEL---LNFPE 226
           Q   L +  F R+        S L   +   VY+   K    E   K + +    L   +
Sbjct: 179 QFGLLGVG-FQRFGDKEKLKSSPLQ--HLFEVYVQINKAAADENTKKLAKDFFKKLEEHD 235

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E+ L + K++   ++ +  R   K L +  D +  E  +        ++++  L  +G +
Sbjct: 236 EQALSLWKEFRDFSIKEYTRI-YKRLGVHFDEYSGESFYQE----KSQEVLKMLEDKGLL 290

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY- 345
            +        K T   D+  K+ L   +         +++SDG+  Y   DLA    +  
Sbjct: 291 QKTT------KGTGVVDLSEKKDLSSLST--------VIRSDGTSLYITRDLAAAIDRMN 336

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +  +D MIYV  +D       L   +A        + +L C+ V     G+   M  R G
Sbjct: 337 KYNWDTMIYVSIND-------LWKESAGFWHMVVPVYLLWCQHVSF---GLVQGMKTRKG 386

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD---------------------------FD 438
           + + L  V+DEV S  +  M   +   E+ D                           F 
Sbjct: 387 EVVFLEDVLDEVRSRMLENMASAKTTKEVEDPVETAEKVGLAALIIQDFRGLLSSDYQFS 446

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + +   QS+ +   ++QY +AR  S+ R   +          P   +      +   + +
Sbjct: 447 WDRAL-QSRGDTGVFLQYTHARLHSLERMHGNE---------PVTDVNVACLQEPDAISI 496

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           + HL  Y  V+  ++   +P  +  YL  L+ +            R   V+ +   L   
Sbjct: 497 LQHLLRYDEVLYRSSQDLQPKHIVSYLLTLSHL-------AAVAHRTLPVKGSTPALAQA 549

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A  S++ +G+ ++G+    +M
Sbjct: 550 RLCLFQATRSVLANGMKLLGITPVTQM 576


>gi|322711579|gb|EFZ03152.1| arginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 648

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 122/638 (19%), Positives = 229/638 (35%), Gaps = 104/638 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           + +L ++  KI   +  +   V+   +    G      A+   R  G     +A+    +
Sbjct: 40  RAHLSDVLSKISGVETSIIYPVVMWTQSLDKGDF--VVAVPALRIKGKKADVLAQEWAEK 97

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-----------SGIEYGRNLIGKG 120
              D  +    +    F++ ++    L + +  +V            +G+   ++L    
Sbjct: 98  FPEDDPLFDKPVLSGHFMSFFVKGEPLTESIIPLVRKAGKDFGKNRFNGLRDPKDLSSGK 157

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +EF S N   P H GH R  ++G  +A+L   +G++V R  Y+ D G Q   LALS
Sbjct: 158 KRIIVEFSSPNVAKPFHAGHLRSTIIGSFIANLYEANGWDVVRMNYLGDWGKQYGLLALS 217

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL--------KHVGKELADKYSSEL-------LNFP 225
                +       +  P  +   +Y+        +    E   K   ++       L+  
Sbjct: 218 Y---ERNGNEEELNKNPIDHLFKLYVQINAEMSAEKEAIEEQKKEGKDVSALEANSLDEQ 274

Query: 226 EEKWLPIV--KDYSVQAMMKIIR--------DDLKALNIQHDIFISEDDFHRGDPSPIRD 275
             ++   +  +D +V A  +  R        +    LNIQ D F  E        S +  
Sbjct: 275 ARQYFRRMTDRDETVLAQWQRFRDLSIARYKETYSRLNIQFDEFSGESQVSEESMSKVA- 333

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
             D +  +    E         T      + K+L              L K DG+  Y  
Sbjct: 334 --DEMKEKNISREDKGAVLVDFTQLLPGKEGKRL----------GTTVLRKRDGTALYLT 381

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            D+     +YE+  FD+MIYV+ S    ++K+L  +   +  K       + +  +    
Sbjct: 382 RDVCELLGRYEKYNFDHMIYVVASQQDLHLKQLFQIIELLGYKD------IAKKCQHINF 435

Query: 395 GMPIKMSKRAGDFITLRHVV----------------------------DEVGSDSVRFMM 426
           G+ + MS R G    L  ++                            D +G  SV    
Sbjct: 436 GLVLGMSTRKGTVKFLDDILKDCADHMHETMKKNEEKYAQVENPDATADTLGISSVMVQD 495

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +  K      F+   +    + +   Y+QYA+AR  SI R+A     DLD          
Sbjct: 496 MSGKRINNYTFNMEAMTSF-EGDTGPYLQYAHARLCSIKRRANLTDEDLDSANLSL---- 550

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                +   + ++  L+++P V++N     EP  +  YL+ +  V    + H +      
Sbjct: 551 ---LKEDHAVNIVRMLSQWPDVLQNTLKTLEPTTVLTYLFKMTHVISSSYDHLQ------ 601

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            V  + R+L   R+ L  A  + + +G+ I+G+     
Sbjct: 602 -VVGSERELMKSRMALYDAARTTLANGMRILGLTPLER 638


>gi|197100773|ref|NP_064716.2| probable arginyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|74744409|sp|Q5T160|SYRM_HUMAN RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|55859660|emb|CAI10899.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|56203448|emb|CAI20376.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119568969|gb|EAW48584.1| arginyl-tRNA synthetase-like, isoform CRA_a [Homo sapiens]
 gi|189055050|dbj|BAG38034.1| unnamed protein product [Homo sapiens]
          Length = 578

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 117/620 (18%), Positives = 230/620 (37%), Gaps = 87/620 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLT 63
           F   +   L  +   +  E  I     +   +         +   +L +       D   
Sbjct: 5   FRRAIACQLSRVL-NLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDIQV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG- 120
            A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG ++ +  G 
Sbjct: 64  QAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGL 122

Query: 121 --TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ D G Q   L 
Sbjct: 123 PQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLG 182

Query: 179 LSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
                  Y++ L +N        Y  V  +    +   K + E    L   + + L + +
Sbjct: 183 TGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQ 242

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G + + I    
Sbjct: 243 KFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLKTI---- 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             K T   D+            GD      +++SDG+  Y   DLA    + ++  FD M
Sbjct: 294 --KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTM 342

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV       + +++  +   +    A       E  +    G+   M  R GD   L  
Sbjct: 343 IYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFLED 395

Query: 413 VVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVKEQ 445
           V++E+    ++ M   +   EL                             F + +V  Q
Sbjct: 396 VLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSWDRV-FQ 454

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S+ +   ++QY +AR  S+            F     N        +   + ++ HL  +
Sbjct: 455 SRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLLRF 505

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+  ++   +P  +  YL  L+ +            +   ++ +  ++   RL L  A
Sbjct: 506 DEVLYKSSQDFQPRHIVSYLLTLSHL-------AAVAHKTLQIKDSPPEVAGARLHLFKA 558

Query: 566 VASIINSGLNIIGVESPNEM 585
           V S++ +G+ ++G+     M
Sbjct: 559 VRSVLANGMKLLGITPVCRM 578


>gi|207080008|ref|NP_001128754.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Pongo
           abelii]
 gi|75042508|sp|Q5REH3|SYRM_PONAB RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|14714568|gb|AAH10420.1| Arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|55726121|emb|CAH89834.1| hypothetical protein [Pongo abelii]
          Length = 578

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 117/620 (18%), Positives = 229/620 (36%), Gaps = 87/620 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLT 63
           F   +   L  +   +  E  I     +   +         +   +L +       D   
Sbjct: 5   FRRAIACQLSRVL-NLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDIQV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG- 120
            A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG ++ +  G 
Sbjct: 64  QAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGL 122

Query: 121 --TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ D G Q   L 
Sbjct: 123 PQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLG 182

Query: 179 LSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
                  Y++ L +N        Y  V  +    +   K + E    L   + + L + +
Sbjct: 183 TGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQ 242

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G +   I    
Sbjct: 243 KFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLRTI---- 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             K T   D+            GD      +++SDG+  Y   DLA    + ++  FD M
Sbjct: 294 --KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTM 342

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV       + +++  +   +    A       E  +    G+   M  R GD   L  
Sbjct: 343 IYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFLED 395

Query: 413 VVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVKEQ 445
           V++E+    ++ M   +   EL                             F + +V  Q
Sbjct: 396 VLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSWDRV-FQ 454

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S+ +   ++QY +AR  S+            F     N        +   + ++ HL  +
Sbjct: 455 SRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLLRF 505

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+  ++   +P  +  YL  L+ +            +   ++ +  ++   RL L  A
Sbjct: 506 DEVLYKSSQDFQPRHIVSYLLTLSHL-------AAVAHKTLQIKDSPPEVAGARLHLFKA 558

Query: 566 VASIINSGLNIIGVESPNEM 585
           V S++ +G+ ++G+     M
Sbjct: 559 VRSVLANGMKLLGITPVCRM 578


>gi|119190465|ref|XP_001245839.1| arginyl-tRNA synthetase [Coccidioides immitis RS]
 gi|303315135|ref|XP_003067575.1| arginyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240107245|gb|EER25430.1| arginyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 647

 Score =  308 bits (790), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 116/659 (17%), Positives = 230/659 (34%), Gaps = 135/659 (20%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIAELIVA 70
           + ++ E+   I  ++       ++       G L     A+ +    G  P  +AE I A
Sbjct: 39  RAHIAELIGPIVGKEPEFVYTRLQWTNTLDKGDLLLAVPALQIK---GRKPTDLAEEIAA 95

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
           +      V+S   AG   +  +     L   +   ++            G+   R+    
Sbjct: 96  KFPQSDLVESPKAAGTH-LQFHFRAQPLIHTVIPSILENKATYGTNANIGLRDPRDPSKG 154

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA 
Sbjct: 155 KKRIVVEFSSPNIAKPFHAGHLRSTIIGGFLANLYRIMGWDVIKMNYLGDWGKQYGLLAN 214

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLK----------------------------- 207
                    +Y N+ +L   P  +   VY+K                             
Sbjct: 215 GY------KMYGNEEELLKDPINHLFEVYVKINKDVGEQEGPIKELKEQIKLKKEKGEDV 268

Query: 208 ------------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                           E A +Y   + +  E+  L + + +   ++ K  +     LNI 
Sbjct: 269 AALEKELETLVDASWDEKARRYFKSMEDGDEDA-LALWRRFRDLSIEKY-KQTYARLNID 326

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E    +   S +   +          EG+    +            + L ++  
Sbjct: 327 FDVYSGESQVKQESLSKVYQTMQE--------EGVSEDSEGAIIVDFTKHGAKKLGKA-- 376

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374
                   +++ DG+  Y   D+A    + E   FD M+YV+ +    ++ +L      +
Sbjct: 377 -------IVVRKDGTPLYLTRDIAAIFERDETFHFDKMLYVVAAQQDLHLAQLFKTVELM 429

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSVRF-- 424
             K       L E  +    GM   MS R G    L  ++ +VG         ++V++  
Sbjct: 430 GRKD------LAERCQHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMKKNAVKYEQ 483

Query: 425 ------------------MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                               +  K     +F+   +    + +   Y+QYA+AR  S+ R
Sbjct: 484 VQNPDETADTLGITSVMVQDMSGKRINGYEFNLEDMTSF-EGDTGPYLQYAHARLCSVNR 542

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A     ++D  +     +      ++  + L+  L+++P V+ N+    EP  +  YL+
Sbjct: 543 KA-----EIDPSVLGSADLSL--LTESHAVDLVRLLSQWPDVVLNSMKTLEPTTIITYLF 595

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +       +   +       V  +  +L   R+ L H    ++N+G+ ++G+     M
Sbjct: 596 RMTHTLSSGYDTLK-------VVGSEPELKKARMALYHCARQVLNNGMRLLGLNPVERM 647


>gi|73973434|ref|XP_539032.2| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 1 [Canis
           familiaris]
          Length = 578

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 113/559 (20%), Positives = 215/559 (38%), Gaps = 83/559 (14%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG-- 120
           A  +  ++K D  V  +   G+G +N  ++   L K  L  ++  G +YG ++ +  G  
Sbjct: 65  ARKLAEKLKCDSVVSEIS-TGQGTVNFKINRELLTKTVLQQVIKDGSKYGLKSELFSGLP 123

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L  
Sbjct: 124 QKKIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGT 183

Query: 180 SVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
                 Y++ L ++        Y  V  +    +   K + E    L   + + L + + 
Sbjct: 184 GFQLFGYEEKLQSSPLQHLFEVYVQVNKEAADDKNVAKSAHEFFQRLELGDTQALALWQK 243

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   ++ + +R   K L +  D +  E  F+R      ++++  L  +G + + I     
Sbjct: 244 FRDLSIEEYVRV-YKRLGVHFDEYSGES-FYREKS---QEVLKLLDSKGLLQKTI----- 293

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            K T   D+            GD      L++SDG+  Y   DLA    + ++  FD MI
Sbjct: 294 -KGTAIVDLSGN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDKYNFDTMI 343

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV       + +++  +   +    A       E  +    G+   M  R GD   L  V
Sbjct: 344 YVTDKGQKKHFQQVFQMLQIMGYDWA-------ERCQHVPFGVVQGMKTRKGDVTFLEDV 396

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++E                           VG  ++              F + +V  QS
Sbjct: 397 LNEIRLRMLQNMASLKTTKVLENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRV-FQS 455

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + +   ++QY +AR  S+            F     N        +   + ++ HL  + 
Sbjct: 456 RGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLLRFD 506

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+  ++   +P  +  YL  L+ +            +  +V+ +  ++   RL L  AV
Sbjct: 507 EVLYRSSQDLQPRHIVSYLLTLSHL-------AGMAHKTLYVKDSPPEVAGARLHLFRAV 559

Query: 567 ASIINSGLNIIGVESPNEM 585
            S++ +G+ ++G+     M
Sbjct: 560 RSVLANGMKLLGITPVCRM 578


>gi|327402525|ref|YP_004343363.1| arginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318033|gb|AEA42525.1| arginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 631

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 123/675 (18%), Positives = 239/675 (35%), Gaps = 140/675 (20%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               +K+ + E   KI   +     I  ++ +    G  +T     L +  G  P  I +
Sbjct: 1   MEDLIKSAIIEKSNKILGFEISDSLIQFQKTKKEFEGD-TTLVLFPLMKLAGKSPQEIGK 59

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           ++   ++ D    S +    GF+NL    +Y  + LS  + S   +G        ++ +E
Sbjct: 60  VLGDFLRDDIRCISDYSIIGGFLNLSFPNNYWTQQLSE-IDSNATFGSAEKNSKPEIMVE 118

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW--- 183
           + S N   P+H+GH R   +G ++A ++   G++V +   IND G  I    L+      
Sbjct: 119 YSSPNTNKPLHLGHLRNNFLGYSVAQILDAYGHKVIKTQIINDRGIHICKSMLAWQKFSP 178

Query: 184 --RYQQALYNNDSDLPEGYYPGVYLKHVGKEL--------------------------AD 215
                +    N++ L      G Y     K+                             
Sbjct: 179 LNEKGERENPNNTGLKGDKLVGKYYVEFDKQFNAEAKEIIAQWNEGQFDGFPETTVLKYQ 238

Query: 216 KYSSELLNFPE---------------------EKWLPIV-----KDYSVQAMM------- 242
           +++   +   E                      +   ++     +D  V  +        
Sbjct: 239 EFTDAKVGKDEKAIAGLDDKIKELAKNETSILREAKDLLVRWEGRDPEVYLLWTTMNSWV 298

Query: 243 -KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                   + + ++ D    E D         +DI++   ++G +Y+             
Sbjct: 299 YDGFNKTYEKMGVEFDRLYYESDTFILG----KDIVNEGLKKGVLYKK------------ 342

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVMGSD 359
              +   +    T  G D  + LL+SDG+  Y   DL     ++        +IY +G++
Sbjct: 343 ---EDSSVWIDLTGEGLD-HKLLLRSDGTSVYMTQDLGTAVDRFNDYSELTGIIYTVGNE 398

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-- 417
              + K L  +   +    A+    L   +     G   KM  R G  +    ++DE+  
Sbjct: 399 QDYHFKVLFLILDKLGYSWAKSCFHLSYGMVDLPSG---KMKSREGTVVDADDLMDEIVQ 455

Query: 418 ---------------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                      G   +++ +L     + + F+  +  E    N 
Sbjct: 456 SAQEMTTERGHLDGMSETEREILYKTIGMGGLKYYLLKVDPKKRMMFNPAESIEL-NGNT 514

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             ++QYA+AR +S+  +A     D +            +E   SE ++I  LA YP VIE
Sbjct: 515 GPFIQYAHARIQSLLGKATGFNLDTN------------TELGASEKEIIKQLALYPSVIE 562

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +A     P  +A Y Y+L  +F+  + +      +  +   ++K   +RL +   VA +I
Sbjct: 563 DAAKTYSPALVANYTYELVKLFNQFYQN------VMILSEEDQKQKAVRLTVCKNVAKVI 616

Query: 571 NSGLNIIGVESPNEM 585
            S +N++G+  PN+M
Sbjct: 617 KSSMNLLGISVPNKM 631


>gi|196017893|ref|XP_002118673.1| hypothetical protein TRIADDRAFT_62694 [Trichoplax adhaerens]
 gi|190578490|gb|EDV18839.1| hypothetical protein TRIADDRAFT_62694 [Trichoplax adhaerens]
          Length = 344

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 130/352 (36%), Positives = 209/352 (59%), Gaps = 8/352 (2%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F  F S +   ++    KI  +    + I +E P++  +G LS+N ++I+++   L+
Sbjct: 1   MNIFLYFKSLIYTAVENTYPKILSD----NEIKVEYPKNEDYGDLSSNVSIIIAKKKKLN 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A+ + + +  +  +  + I G GF+N  + P +  K L  +V  G  Y +  IG G
Sbjct: 57  PRDVAKELSSILLANEYISEISIEGAGFLNFKIKPYFWHKFLKKLVNLGHNYPKIDIGNG 116

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+N+EFVSANPTGP+H+GH + AV GD +++L++  GY V RE+YINDAG QI TL  S
Sbjct: 117 EKINVEFVSANPTGPLHLGHAKGAVFGDVISNLLSKCGYNVIREFYINDAGNQIKTLTKS 176

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  RY+Q L     +L +  YPG YL  +   L D++ ++L           +K+++V+ 
Sbjct: 177 LEIRYKQLL-GEKIELDKDCYPGEYLIDIATILKDEFKNKLDTLTNNDREEFLKNFAVER 235

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           ++KII+DDL  L + HD FISE      + + +   I  L  +  +Y+GIL  PKS+   
Sbjct: 236 ILKIIKDDLSKLGVIHDYFISEKKL--IEQNKVESCIYFLKEKNLLYKGILDKPKSEENN 293

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
             +  ++Q+LF+ST  GDD+DR ++KS+G YTYF +D+AY   K +RGF+NM
Sbjct: 294 YWE-SKEQILFKSTKFGDDIDRAVIKSNGEYTYFVSDIAYHLDKIKRGFNNM 344


>gi|114608416|ref|XP_518630.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 578

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 117/620 (18%), Positives = 230/620 (37%), Gaps = 87/620 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLT 63
           F   +   L  +   +  E  I     +   +         +   +L +       D   
Sbjct: 5   FRRAIACQLSRVL-NLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDIQV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG- 120
            A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG ++ +  G 
Sbjct: 64  QAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGL 122

Query: 121 --TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ D G Q   L 
Sbjct: 123 PQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLG 182

Query: 179 LSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
                  Y++ L +N        Y  V  +    +   K + E    L   + + L + +
Sbjct: 183 TGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQ 242

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G + + I    
Sbjct: 243 KFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLKTI---- 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             K T   D+            GD      +++SDG+  Y   DLA    + ++  FD M
Sbjct: 294 --KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTM 342

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV       + +++  +   +    A       E  +    G+   M  R GD   L  
Sbjct: 343 IYVTDKGQEKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFLED 395

Query: 413 VVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVKEQ 445
           V++E+    ++ M   +   EL                             F + +V  Q
Sbjct: 396 VLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSWDRV-FQ 454

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S+ +   ++QY +AR  S+            F     N        +   + ++ HL  +
Sbjct: 455 SRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLLRF 505

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+  ++   +P  +  YL  L+ +            +   ++ +  ++   RL L  A
Sbjct: 506 DEVLYKSSQDFQPRHIVSYLLTLSHL-------AAVAHKTLQIKDSPPEVAGARLHLFKA 558

Query: 566 VASIINSGLNIIGVESPNEM 585
           V S++ +G+ ++G+     M
Sbjct: 559 VRSVLANGMKLLGITPVCRM 578


>gi|154339890|ref|XP_001565902.1| arginyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063220|emb|CAM45422.1| putative arginyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 692

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 121/673 (17%), Positives = 229/673 (34%), Gaps = 158/673 (23%)

Query: 45  LSTNAAMILSRPL-------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97
              N AM L + L        + P  + E +   +  +  +D      KGFIN+ +   +
Sbjct: 44  YQCNNAMGLVKVLSQQPQSIKMSPQMVGEELKKNLVENDIIDEFEPTTKGFINISIRKEW 103

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + ++++ ++  GI   R  + K  +V ++F S N    MHVGH R  ++G++++ L+ F 
Sbjct: 104 VAQMVNEVLNQGI---RPPVVKKQRVLVDFSSPNIAKEMHVGHLRSTIIGESISRLLEFC 160

Query: 158 GYEVTREYYINDAGAQINTLALSV-------------------FWRYQQALYNNDSDLPE 198
            ++V+R  +I D G     L L +                   F+R  +  ++ D    E
Sbjct: 161 LHDVSRINHIGDWGTAFGMLILYIKRKFPDYTTNPPAISDLTAFYRAAKKCFDEDQQFKE 220

Query: 199 GYYPGV---------------YLKHVGKE-------------------LADKYSSELLNF 224
                V               Y+  V +E                     +    ++LN 
Sbjct: 221 QARLEVVKLQALEEDSIQAWKYICDVSREEFNGVYARLGATITERGESFYNPLIPKVLNL 280

Query: 225 PEEKWLPIVKDYSVQAMMKIIRD-------DLKALNIQHDIFISE--DDFHRGDPSPIRD 275
            EE     V D +   + +  R        D+  L  QH  F+S     +H    + ++ 
Sbjct: 281 LEEADQIEVSDGAKLIISREERKLDSLDSRDMTKLASQHLAFLSRDGSSYHPNLIAAMKK 340

Query: 276 I------------------------------IDNLARQ-GYVYEGILPPPKSKTTQKCDM 304
           +                              +D L  Q   +Y+  L P   +  +   +
Sbjct: 341 VGILTGAEGEESVVLSKKEVKLWKKFDIRMDLDKLMAQLAPLYKKQLDPLFLEAFKAAGI 400

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
            +   +    +        ++KSDG YTY   D+     ++     D +IY        +
Sbjct: 401 VKGDCIL---VPRFSFPLMVVKSDGGYTYDTTDVTATYHRFVVEKMDRVIYCTDVGQYEH 457

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
            +     A  +   +          +    DG   K+  R+G+   L+ ++DE       
Sbjct: 458 FRMCLQTAKDMGWMEHATWDHAGFGLVTGADGK--KIKTRSGETAKLKDLMDEAVERSLA 515

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    +G  ++++  L +  +    F + K+ + S  N  
Sbjct: 516 ILKEREAGERSQGHSEEEMQTLSNIIGIGAIKYFDLKQTRTSDYAFSYDKMLDMS-GNTA 574

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++ Y YAR  SI R+A       + +L     I  E+     E  L +    +  VI  
Sbjct: 575 VFLLYQYARICSIKRKAGV----AEEELLKITDISLET---PQEKNLALCALRFQTVILK 627

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P+ LA + Y+L + F   + H R           +  L   RL L+      + 
Sbjct: 628 AVEDLFPHHLADFAYELMTNFSTFFQHCRVV---------DDPLQNSRLCLIELTRITLK 678

Query: 572 SGLNIIGVESPNE 584
             L ++ +E+   
Sbjct: 679 KTLELLAIETAER 691


>gi|297291297|ref|XP_001092575.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial [Macaca
           mulatta]
          Length = 593

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 118/627 (18%), Positives = 233/627 (37%), Gaps = 93/627 (14%)

Query: 5   ADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERP--RDCAHGHLSTNAAMIL------SR 55
           AD +S  +  +  ++   + +  + L   +   P  +         +   +L      SR
Sbjct: 14  ADMASSFRRAIACQLSRVLNLPPENLITSISAVPISQKEEVADFQLSVDSLLEEDNDHSR 73

Query: 56  PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG- 113
           P   D    A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG 
Sbjct: 74  P---DIQVQAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGL 129

Query: 114 RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ D 
Sbjct: 130 KSELFSGLPRKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDW 189

Query: 171 GAQINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPE 226
           G Q   L        Y++ L +N        Y  V  +    +   K + E    L   +
Sbjct: 190 GMQFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKSAQEFFQRLELGD 249

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
            + L + + +   ++ + +R   K L +  D +  E  F+R      ++++  L  +G +
Sbjct: 250 VQALSLWQKFRDLSIEEYVRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLL 304

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            + I        +   D      + R              SDG+  Y   DLA    + +
Sbjct: 305 LKTIKGTAVVDLSGNGDSSSICTVMR--------------SDGTSLYATRDLAAAIDRMD 350

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +  FD MIYV       + +++  +   +    A       E  +    G+   M  R G
Sbjct: 351 KYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRG 403

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSEL---------------------------LDFD 438
           D   L  V++E+    ++ M   +   EL                             F 
Sbjct: 404 DVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFS 463

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + +V  QS+ +   ++QY +AR  S+            F     N        +   + +
Sbjct: 464 WDRV-FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSI 513

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           + HL  +  V+  ++   +P  +  YL  L+ +            R   ++ +  ++   
Sbjct: 514 LQHLLRFDEVLYKSSQDLQPRHIVSYLLTLSHL-------AAVAHRTLQIKDSPPEVAGA 566

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  AV S++ +G+ ++G+     M
Sbjct: 567 RLHLFKAVRSVLANGMKLLGITPVCRM 593


>gi|327261527|ref|XP_003215581.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 579

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 115/620 (18%), Positives = 222/620 (35%), Gaps = 87/620 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-SRPLGLDPLTI- 64
           F   +   L  +  ++  E  I     +   +           + +L +  +      I 
Sbjct: 6   FRRSIAAQLSHVL-EVPPENLIKSICAVPVSKKGQETDFQLFVSSVLDANSIDNSRRDIQ 64

Query: 65  --AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIG--- 118
             A+ +  ++K D  V  +   G G +N  ++   L K  L  +   G +YG        
Sbjct: 65  LEAQNMAKKLKCDGVVSRIG-TGDGTVNFTINRELLAKTVLQQVFDDGPQYGLKSELFSD 123

Query: 119 -KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                + IEF S N     HVGH R  ++G+ +A+L    G+ V R  Y+ D G Q   L
Sbjct: 124 LPKRNIIIEFSSPNIAKKFHVGHLRSTIIGNFVANLKEACGHYVKRINYLGDWGMQFGLL 183

Query: 178 ALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIV 233
                 +  ++ L +N        Y  V      +E   K + +    L   EE+ + + 
Sbjct: 184 GAGFQRFGSEEKLRSNPLQHLFEVYVQVNKASEEEENTKKQAQDFFRKLEMREEQAVSLW 243

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + +   ++ + I    K L +  D +  E D+        + ++  L  +G +       
Sbjct: 244 QHFRNVSIEEYI-QMYKRLGVCFDEYSGESDYQE----KSQKVLKMLDTKGLL------K 292

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
              + T    +              D    +++SDG+  Y   DLA    + ++   D M
Sbjct: 293 KTKEGTGVVHLSENG----------DQSVVIMRSDGTSLYLTRDLAAAIDRMDKYNPDTM 342

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV   +   + +++  +   +  +  +    L         G    M  R G+ + L  
Sbjct: 343 IYVTDKNQVPHFQQVFQILRLLGYEWTERCQHLPF-------GRVQGMKTRKGEVVFLED 395

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           V+DE                           +G  ++         S    F + +V  Q
Sbjct: 396 VLDEARSMVLERSALAKTTKELDNPLETAENIGLAALIIQDFKGLLSSDYQFSWDRVL-Q 454

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S+ +   ++QY +AR  S+         D+   +   + I      D   + LI HL  Y
Sbjct: 455 SRGDTGVFLQYTHARLWSL--------EDMCGTVNQVSHINMACLQDPPAVSLIQHLLRY 506

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             ++  ++   +P  +  YL  L+ +            +   V+ +  +L   RL L  A
Sbjct: 507 DEILYQSSKDLQPKHIVNYLLKLSHL-------TAVAHKRLPVKGSVPELAESRLCLFQA 559

Query: 566 VASIINSGLNIIGVESPNEM 585
           V +++ SG+ ++G+   N+M
Sbjct: 560 VRTVLGSGMKLLGITPVNKM 579


>gi|220673255|emb|CAX12336.1| novel protein similar to vertebrate arginyl-tRNA synthetase-like
           (RARSL, zgc:63702) [Danio rerio]
 gi|220679527|emb|CAN88095.2| novel protein similar to vertebrate arginyl-tRNA synthetase-like
           (RARSL, zgc:63702) [Danio rerio]
          Length = 597

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 124/576 (21%), Positives = 217/576 (37%), Gaps = 104/576 (18%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----GIEYGRNLIGKGTK 122
           +  +I+ D  V+ V I G+G I+  L+   L + L   + S     G++       +  +
Sbjct: 68  LARQIRTDAVVEEV-IPGRGVIHFRLNKLLLAQKLLDQLRSDPDGFGVKSEILRRLRVGR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +EF S N     H GH R  ++G+ +A+L    G EV R  Y+ D G Q   L  S F
Sbjct: 127 TLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALGNEVIRVNYLGDWGMQFGLLG-SGF 185

Query: 183 WRY---QQALYNNDSDLPEGYYPG---------------VYLK-------HVGKELADKY 217
            R+   ++        L E    G               VY++             A  +
Sbjct: 186 ERFGSQEKLRTQPLEHLFESSVGGCCVFLYGSAVCVRPQVYVQVNREAESDASVRSAAAH 245

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
               L   EE+ L + + +    + +  +   + L ++ D +  E  FHR +   +   +
Sbjct: 246 FFRRLEQSEEQALELWRHFREITIHEY-KRIYQRLGVEFDHYSGES-FHRAETQTV---L 300

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           D L  +  +            + K DM                   L++SDG+  Y   D
Sbjct: 301 DELRSRRLLKTSQKGTGVVDLSDKGDMSNYAT--------------LVRSDGTSLYITRD 346

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +A    + +R  FD MIYV     + + ++L  +  A+    A     +         G+
Sbjct: 347 VAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRILQAMGHPWAGSCHHVAF-------GL 399

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-------------------- 436
              MS R G+ + L  V++E  S  +  M   R + EL D                    
Sbjct: 400 VQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRTSKELEDPEVTAERIGISALIVQDFKG 459

Query: 437 -------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                  F++ KV  Q++ +   ++QY +AR  S+ RQ        DF            
Sbjct: 460 PLISDYRFEWDKVL-QAQGDTGVFLQYTHARLCSLLRQQDCEISCSDFSPLT-------- 510

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             D+  + L+ HL  Y  V+       +P  L  +L  L+ +        RE P    V+
Sbjct: 511 --DSRSVSLLQHLLRYDEVLLQCATDLQPKHLVNFLMTLSHLVAS---AHRELP----VK 561

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  +   RL L  +V S++ +G+ I+G+   ++M
Sbjct: 562 GSSEAVAQARLCLFSSVRSVLANGMRILGITPVDKM 597


>gi|94985140|ref|YP_604504.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555421|gb|ABF45335.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 628

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 130/646 (20%), Positives = 236/646 (36%), Gaps = 104/646 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  + LK  +++   ++         + I+       G   T AA  +++ LG +P  +A
Sbjct: 21  DLKAELKAAVQQAAAELGAPV----DVAIQETPANKPGDYGTPAAFQMAKALGQNPAQVA 76

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +  ++++   +  V  AG  F+N ++        + + V + +E    +  +  KV I
Sbjct: 77  AQLAQKVRLPAGIARVEAAGP-FLNFFVD-------VGAFVRAVVEEPTRIPAQSGKVVI 128

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFW 183
           E  S NP   +HVGH R  V+GD+LA +   +G+ V  + YI+D G Q      A+  + 
Sbjct: 129 EHTSVNPNKELHVGHLRNVVLGDSLARIFRAAGHTVEVQNYIDDTGRQTAESLFAVKHYG 188

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R    +   D  L EGY          KE  +    E+++  E   L       V+ +++
Sbjct: 189 RVWDGVQKYDHWLGEGYVRLN--ADPEKETLEPGIREVMHQLEAGEL----RPEVEKVVR 242

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              +    L  ++D+   E D        +   ++ L    Y                  
Sbjct: 243 AHLETCFRLGARYDLLNWESDVV--GSGFLGKAMNILEESRYTSHPTEGKYAGAFVMDVS 300

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY------------------ 345
                L        ++ +  LL+SDG+  Y A D+ Y   K+                  
Sbjct: 301 EFMPGL--------EEPNVVLLRSDGTAMYAAKDIGYQFWKFGLFEGMKFKPFITDPEGH 352

Query: 346 -------------ERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
                        ER F +   +I V+ S        + +      E + Q   +     
Sbjct: 353 VVWTSAPDGEPDLERRFGHAQEVINVIDSRQDHPQTVVRSALGVAGEPEKQARSIHLSYA 412

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGSDS 421
            +  +G    +S R G  ++    +DE                            +G  +
Sbjct: 413 FVTLEGQT--ISGRKGIAVSADEAMDEAERRALAVLAEINPELAAREDAAEIARRIGIGA 470

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +RF ML  + +  +DF + +       +   YVQYA  R  +I R+A++     D     
Sbjct: 471 IRFAMLKAEPTRKIDFRWDQALAL-NGDTAPYVQYAAVRAANILRKAQEAGYATDGSGAD 529

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + +P         + L   +A  P V+  A     P+ +A Y  DLA+ F+  ++   +
Sbjct: 530 WSALPDID------VNLAKMVARLPEVVAQAVRVHSPHVVAQYALDLATAFNAWYNAKDK 583

Query: 542 N--PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N  P    +Q +   L   RL LV  +       L++IG++ P  M
Sbjct: 584 NGKPATNVLQ-SPAGLREARLALVARLRKGFEETLDLIGIQVPAAM 628


>gi|301780288|ref|XP_002925560.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 644

 Score =  307 bits (786), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 120/607 (19%), Positives = 232/607 (38%), Gaps = 102/607 (16%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMIL------SRPLGLDPLTIAELIVARIKIDPDVDS 80
           K +  + I   R         +   +L      SRP   D    A  +  ++K D  V  
Sbjct: 92  KSISAVPI--SRKEEVADFQLSVDSVLENNNDHSRP---DIQVQAMRLAEKLKCDTVVSE 146

Query: 81  VFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGP 135
           +   G+G +N  ++   L K  L  ++  G +YG ++ +  G    K+ +EF S N    
Sbjct: 147 IS-TGQGTVNFKINRELLTKTVLQQVINDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKK 205

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDS 194
            HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L        Y++ L +N  
Sbjct: 206 FHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN-- 263

Query: 195 DLPEGYYPGVYLK-------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             P  +   VY++             +     + L   + + L + + +   ++ + +R 
Sbjct: 264 --PLQHLFEVYVQVNKEATDDKNIAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRI 321

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             K L +  + +  E  F+R      ++++  L  +G + + +      K T   D+   
Sbjct: 322 -YKRLGVHFNEYSGES-FYREKS---QEVLKLLDSKGLLQKTV------KGTAVVDLSGN 370

Query: 308 QLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
                    GD      +++SDG+  Y   DLA    + ++  FD MIYV       + +
Sbjct: 371 ---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQ 421

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           ++  +   +    A       E  R    G+   M  R G+   L  V++E+ S  ++ M
Sbjct: 422 QVFQMLQIMGYDWA-------ERCRHVPFGVVQGMKTRRGNVTFLEDVLNEIRSRMLQNM 474

Query: 426 MLWRKNSEL---------------------------LDFDFCKVKEQSKENPVFYVQYAY 458
              +   EL                             F + +V  QS+ +   ++QY +
Sbjct: 475 ASIKTTRELENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRV-FQSRGDTGVFLQYTH 533

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+            F     N        +   + ++ HL  +  V+  ++   +P
Sbjct: 534 ARLHSLEE---------TFGCGYLNDFNTGCLQEPQSVSILQHLLRFDEVLYRSSQDLQP 584

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             +  YL  L+ +            +  F++ +  ++   RL L  AV S++ +G+ ++G
Sbjct: 585 RHIVSYLLTLSHL-------AAVAHKTLFIKDSPPEVAGARLHLFRAVRSVLANGMKLLG 637

Query: 579 VESPNEM 585
           +     M
Sbjct: 638 ITPVCRM 644


>gi|194378726|dbj|BAG63528.1| unnamed protein product [Homo sapiens]
          Length = 454

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 100/485 (20%), Positives = 195/485 (40%), Gaps = 66/485 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NND 193
           MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   +  ++   L      
Sbjct: 1   MHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            DL   +Y     +   +E   K + + +   + K   I K  + + +  + R +L  + 
Sbjct: 61  GDLQV-FYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AWKLICDVSRQELNKIY 117

Query: 254 IQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
              D+ + E    F++     + DI+     +G+V                  D ++++F
Sbjct: 118 DALDVSLIERGESFYQ---DRMNDIVKEFEDRGFVQVD---------------DGRKIVF 159

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAV 370
              + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S + + + A 
Sbjct: 160 ---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAA 216

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
           A  +     ++  +      +       K   R+G+ + L  ++ E              
Sbjct: 217 AQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKER 276

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          V    +++  L         F F K+ +  + N   Y+ YA+ R 
Sbjct: 277 DKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRI 335

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520
           RSI R A     ++D ++  +     +   D   E  L   +  +P +++        + 
Sbjct: 336 RSIARLA-----NIDEEMLQKAARETKILLDHEKEWNLGRCILRFPEILQKILDDLFLHT 390

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++
Sbjct: 391 LCDYIYELATAFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEAVAAVMAKGFDILGIK 449

Query: 581 SPNEM 585
               M
Sbjct: 450 PVQRM 454


>gi|255036439|ref|YP_003087060.1| arginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949195|gb|ACT93895.1| arginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 592

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 110/634 (17%), Positives = 230/634 (36%), Gaps = 99/634 (15%)

Query: 7   FSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
             + LK  +++   K  ++E +    ++++  +    G  +      L++     P  I 
Sbjct: 3   IEAILKEDIQKAVQKHFQLESQ---EVILQPTKKEFEGFYTF-VTFPLTKAARKAPAEIG 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++I   +     + + F   +GF+N+ L  S    +   I          L   G  V +
Sbjct: 59  QIIGDELVASSSLVAGFNVVQGFLNISLKDSTWLDLFGGIHSDEAFG--TLPSNGKSVMV 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF S N   P+H+GH R   +GD+L+ ++  SGY+V +   +ND G  I    L+     
Sbjct: 117 EFSSPNTNKPLHLGHLRNNFLGDSLSKILKASGYDVVKTCLVNDRGIHICKSMLAYREL- 175

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-FPEEKWLP------------- 231
                   S +   +  G Y      E   +  + +     EE+                
Sbjct: 176 GNGETPESSGIKGDHLAGKYYVLFDIEYKKQIKALVAEGLSEEEAAKKAPWILEAQKLLL 235

Query: 232 IVKDYSVQAMMKIIR----------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           + ++   + +    +             K + +  D    E + +       +DII+   
Sbjct: 236 LWENNDAETVALWQKMNNWVYDGFAQTYKKIGVSFDKTYYESNTYLLG----KDIIEEGL 291

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++G  ++                    +       G D ++ +L+ DG+  Y   DL   
Sbjct: 292 QKGVFFKKP---------------DNSVWIDLAEEGLD-EKLVLRGDGTSVYITQDLGTT 335

Query: 342 KCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           + K  +   D  ++V+G++   + K L A+   +    A     +   +     G   KM
Sbjct: 336 ELKNGDFSNDRYLWVVGNEQDYHFKVLFAILKRLGRTYADGCYHISYGMVDLPSG---KM 392

Query: 401 SKRAGDFITLRHVV-----------DEVGS------------------DSVRFMMLWRKN 431
             R G  +    +V            E+G                    ++++ +L    
Sbjct: 393 KSREGTVVDADDLVAQMVQTATDRTQELGKIDDFNSEEAKQLYSQLALGALKYFLLKVDP 452

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            + + F+  +  +  + +   ++QY YAR RSI R+A+      +       +       
Sbjct: 453 KKRMLFNPEESIDF-QGHTGPFIQYTYARIRSIMRKAEQAGIAAEVPGVNYAM------- 504

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             +E +L+  L++YP  +  A     P  ++ Y ++LA V++  ++       +      
Sbjct: 505 HQAERELVFSLSQYPVKVLAAANEFAPSLISQYAFELAKVYNQFYA------EVSIFSDP 558

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +   +R+ L  AVA  I   L ++G++ P  M
Sbjct: 559 DPEAVKLRVALSSAVAETIRKALGLLGIDVPERM 592


>gi|281343256|gb|EFB18840.1| hypothetical protein PANDA_015081 [Ailuropoda melanoleuca]
          Length = 548

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 112/563 (19%), Positives = 220/563 (39%), Gaps = 91/563 (16%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG-- 120
           A  +  ++K D  V  +   G+G +N  ++   L K  L  ++  G +YG ++ +  G  
Sbjct: 35  AMRLAEKLKCDTVVSEIS-TGQGTVNFKINRELLTKTVLQQVINDGSKYGLKSELFSGLP 93

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L  
Sbjct: 94  QKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGT 153

Query: 180 SVFW-RYQQALYNNDSDLPEGYYPGVYLK-------HVGKELADKYSSELLNFPEEKWLP 231
                 Y++ L +N    P  +   VY++             +     + L   + + L 
Sbjct: 154 GFQLFGYEEKLQSN----PLQHLFEVYVQVNKEATDDKNIAKSAHEFFQRLELGDTQALA 209

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + + +   ++ + +R   K L +  + +  E  F+R      ++++  L  +G + + + 
Sbjct: 210 LWQKFRDLSIEEYVRI-YKRLGVHFNEYSGES-FYREKS---QEVLKLLDSKGLLQKTV- 263

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GF 349
                K T   D+            GD      +++SDG+  Y   DLA    + ++  F
Sbjct: 264 -----KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNF 309

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D MIYV       + +++  +   +    A       E  R    G+   M  R G+   
Sbjct: 310 DTMIYVTDKGQKKHFQQVFQMLQIMGYDWA-------ERCRHVPFGVVQGMKTRRGNVTF 362

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKV 442
           L  V++E+ S  ++ M   +   EL                             F + +V
Sbjct: 363 LEDVLNEIRSRMLQNMASIKTTRELENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRV 422

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
             QS+ +   ++QY +AR  S+            F     N        +   + ++ HL
Sbjct: 423 -FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTGCLQEPQSVSILQHL 472

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +  V+  ++   +P  +  YL  L+ +            +  F++ +  ++   RL L
Sbjct: 473 LRFDEVLYRSSQDLQPRHIVSYLLTLSHL-------AAVAHKTLFIKDSPPEVAGARLHL 525

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AV S++ +G+ ++G+     M
Sbjct: 526 FRAVRSVLANGMKLLGITPVCRM 548


>gi|169858208|ref|XP_001835750.1| arginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116503200|gb|EAU86095.1| arginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 615

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 104/560 (18%), Positives = 207/560 (36%), Gaps = 64/560 (11%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV------------VSGI 110
            IA+ ++ +   +  ++SV +  K F++  L+ + + + + + V                
Sbjct: 83  EIAKKVIDKFTPNEYIESV-VHDKAFLHFRLNTNNMIRAVLTQVYELTHVVPKSAGREDG 141

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            YG+N +G+G KV IE+ S N     HVGH R  ++G  LA+L    G++V    Y+ D 
Sbjct: 142 LYGQNSVGEGKKVIIEYSSPNIAKSFHVGHLRSTIIGAFLANLYKTCGWDVVSMNYLGDW 201

Query: 171 GAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           G Q   +A     +  Q+AL  +        Y  V             ++      E+  
Sbjct: 202 GTQFGMIASGYEKYGNQEALEADAIKHLFDVYVQVNKDAEADPEVKANAAAWFKRMEDGD 261

Query: 230 LPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              ++++ V   M  K   D+ + LN+  D++  E +  +     I   ++ L   G + 
Sbjct: 262 PAALENWKVWRSMSIKKYEDEYERLNVSFDVYTGESEVGK---ESIDKALERLDEMGLIE 318

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           E      K    +K  + +                 + K DG+  Y   D+     +YE+
Sbjct: 319 ES--NGAKLINLEKWKLGKA---------------VVRKKDGTSIYLTRDIGGAIERYEK 361

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCEL 388
             FD MIYV+ S    ++ +   V   +    A+                    V L ++
Sbjct: 362 YKFDKMIYVVSSQQDLHLAQFFKVLELMEFPWAKDLLHINYGLVQGMSTRKGTVVFLNQI 421

Query: 389 VRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +      M  +M      +  +        E+G   V+   +  K      F++ ++   
Sbjct: 422 INEAASVMHEQMKANEEKYSAVEDPETTSREIGITGVKIQDMAAKRINNYTFNWERMLSF 481

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + +   Y+QYA+ R  S+ R+   + P  +       ++      + +  ++   L  Y
Sbjct: 482 -EGDTGPYLQYAHVRLESLKRKNPHLLPLAEPKDLKLELLASPHTPNQA-REIAFLLGSY 539

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V++ A    EP  +  + + LA      W        ++ +  + +     RL L   
Sbjct: 540 PDVVKTALKTHEPSGVVTFAFRLAHAISSAWDAV----VVKSLGEDEKDKASARLFLYFC 595

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ S L ++ +     M
Sbjct: 596 ARDVLGSALKLLTIRPLERM 615


>gi|238497145|ref|XP_002379808.1| arginyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220694688|gb|EED51032.1| arginyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 709

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 116/654 (17%), Positives = 218/654 (33%), Gaps = 119/654 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIA 65
           +   +   L          +KI  R+      D   G L     A+ +    G  P  + 
Sbjct: 100 YREHIAEKLGA--ATGIDSEKIYTRLQWSSTLDK--GDLLLPVPALGIK---GKKPQELC 152

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLY----LSPSYLRKILSSIVV------SGIEYGRN 115
           E +  +      V      G   +  +    L+ + + +IL            G+    +
Sbjct: 153 EELAQKFPESDLVLPPTCVGIHLVFFFKPQPLTHTVVSRILKEKAAYGTNGNQGLRDPSD 212

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q  
Sbjct: 213 PSKGQKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYG 272

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL-ADKYSSEL 221
            LA        +   N D   P  +   VY             +K + +++ A K  +E 
Sbjct: 273 LLANGYKQFGSEEALNKD---PINHLFDVYVKINNVVAQQEGPIKELKEQIKAKKEKNED 329

Query: 222 LNFPEEKWLPIV---KDYSVQAMMK----------------------IIRDDLKALNIQH 256
           ++  E++   +V   +D S +   K                        R     LNI  
Sbjct: 330 VSELEQELQKLVDASEDESARRYFKSMEDGNEEALGLWRRFRDLSIQKYRQTYARLNIDF 389

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++  E        +   + ++                        +     ++   T  
Sbjct: 390 DVYSGESQIKNESMTAAYETMEK-------------------AGVSEKSEGAVIVDFTKH 430

Query: 317 GDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           G        +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +   
Sbjct: 431 GAKKLGKAIIIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITEL 490

Query: 374 VSEKK--AQINVLLCELVR-----------------LYRDGMPIKMSKRAGDF---ITLR 411
           +  K   ++   +   +VR                   RD M   M K    +       
Sbjct: 491 MGHKDLASRCQHVNFGMVRGMSTRKGTVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 550

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              D +G  SV    +  K     DF+   +    + +   Y+QYA+AR  SI R+++  
Sbjct: 551 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLCSIIRKSE-- 607

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
                 ++        +   +T    L   LA++P V+ N T   EP  +  YL+ +   
Sbjct: 608 -----LNVEELGSANLDLLTETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMTHT 662

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   +       V  +  +L   R+ L  +   ++ +G+ ++G+   + M
Sbjct: 663 LSSSYEVLK-------VVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSRM 709


>gi|296198734|ref|XP_002746843.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 578

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 113/599 (18%), Positives = 220/599 (36%), Gaps = 86/599 (14%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLTIAELIVARIKIDPDVDSVFI 83
           K +  + I   ++        +   +L +       D    A+ +  +++ D  V  +  
Sbjct: 26  KSISAVPI--SKNEEAADFQLSVDSLLEKDNDHSRPDIQVHAKRLAEKLRCDTVVSEIS- 82

Query: 84  AGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHV 138
            G+  +N  ++   L K  L  ++  G +YG            K+ +EF S N     HV
Sbjct: 83  TGERTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSDLPQKKIVVEFSSPNVAKKFHV 142

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDSDLP 197
           GH R  ++G+ +A+L    G++V R  Y+ D G Q   L        Y++ L +N     
Sbjct: 143 GHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHL 202

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRDDLKALNI 254
              Y  V  +    +   K + E     EE   + L + + +   ++ + IR   K L I
Sbjct: 203 FEVYVQVNKEAADDKSVAKSAQEFFQRLEEGDVRALSLWQKFRDLSIEEYIRI-YKRLGI 261

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  F+R      ++++  L  +G + + I        +   D      + R  
Sbjct: 262 YFDEYSGES-FYREKS---QEVLKLLESKGLLLKTIKGTAVIDLSGNGDPSSICTVMR-- 315

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
                       SDG+  Y   DLA    + ++  FD MIYV       + +++  +   
Sbjct: 316 ------------SDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKL 363

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +    A       E  +    G+   M  R GD   L  V++E+    ++ M   +   E
Sbjct: 364 MGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKE 416

Query: 434 L---------------------------LDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           L                             F++ +V  QS+ +   ++QY +AR  S+  
Sbjct: 417 LKNPQETAERVGLAALIIQDFKGLLLSDYKFNWDRV-FQSRGDTGVFLQYTHARLHSLEE 475

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                     F     N        +   + ++ HL  +  V+  ++   +P  +  YL 
Sbjct: 476 ---------TFGCGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLL 526

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L+ +            +   ++ +  ++   RL+L  AV S++ +G+ ++G+     M
Sbjct: 527 TLSHL-------AAVAHKTLQIKDSPPEVAGARLRLFKAVRSVLANGMKLLGITPVCRM 578


>gi|315271275|gb|ACO45989.2| putative Arginine--tRNA ligase (Arginine translase) (Arginyl-tRNA
           synthetase) [Deinococcus deserti VCD115]
          Length = 609

 Score =  306 bits (785), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 137/647 (21%), Positives = 233/647 (36%), Gaps = 106/647 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  ++LK  ++     + +         I+       G   T AA  +++  G +P  IA
Sbjct: 2   DLKAQLKAAVEAAAQSMGIPV----DAAIQDTPASKPGDYGTPAAFQMAKSAGGNPAQIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   +++   +  V  AG  F+N +L  +         V   +E    +   G KV I
Sbjct: 58  AQLAQTVQLPTGIKRVEAAGP-FLNFFLDTA-------MFVRDVVENPFVMPSLGGKVVI 109

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFW 183
           E  S NP   +HVGH R  V+GD++A +   +G+ V  + YI+D G Q      A++ + 
Sbjct: 110 EHTSVNPNKELHVGHLRNVVLGDSMARIFRAAGHTVEVQNYIDDTGRQAAEALFAINHYH 169

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R        D  L EG Y  +       +L +  S+ +           V+      +  
Sbjct: 170 REWDGTQKYDHWLGEG-YVRLNADPAKPDLEEGISAIMHRLEAGVLRGEVEKVVTAHLQT 228

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R     L  ++D+   E D        +   ++ L    Y       P + K      
Sbjct: 229 CFR-----LGARYDLLNWESDVV--GSGFLTQAMNILESSRYT----SRPTEGKYAGAFV 277

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---------------- 347
           MD  + +       ++ +  L++SDG+  Y A D+ Y   K+                  
Sbjct: 278 MDVSEFM----PGLEESNVVLVRSDGTAMYAAKDIGYQFWKFGLFEGMKFKPFMTDPDGN 333

Query: 348 ------------------GFDNMIYVMGS--DHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                               D +I V+ S  DH   V R     A   EKK +   L   
Sbjct: 334 TVWTSAPDGEPDVQRRFGHADEVINVIDSRQDHPQTVVRSSLGVAGQYEKKDRSIHLSYA 393

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGS 419
            V L        +S R G  ++    +DE                            +G 
Sbjct: 394 FVTL----EGQTISGRKGIAVSADDAMDEAEKRALAALTELNPDLAAREDAAEIARRIGI 449

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++RF ML  + +  +DF + +       +   YVQYA  R  SI R+A++   +++   
Sbjct: 450 GAIRFAMLKAEPTRKIDFRWEQALAL-NGDTAPYVQYAAVRAASILRKAQEAGHNINGSG 508

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH- 538
              + +P         L L   +A  P V+  +     P+ +A Y  DLA+ F+  ++  
Sbjct: 509 ADWDALPDVD------LALAKMVARLPEVVAQSVRVHSPHVVAQYALDLATAFNAWFNAK 562

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R+      V  +   L   RL LV  +       L++IG+E P  M
Sbjct: 563 DRQGKPATNVLQSEPGLREARLALVGRLRRAFEETLDLIGIEVPAAM 609


>gi|67471201|ref|XP_651552.1| arginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56468302|gb|EAL46165.1| arginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
          Length = 573

 Score =  306 bits (784), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 120/604 (19%), Positives = 229/604 (37%), Gaps = 99/604 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS--RPLGLDPLTIAELIV 69
           K+  + I     +     +R  +E  +    G  S   A I+   +    +P  +A  + 
Sbjct: 7   KSIAETISTVAGIPIDFAER-SVELCKKKELGDFSVPVAKIIRQMKTEEKNPSAVASKLA 65

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +IK +  +  V + G  F+N  ++ S L K+ L+ +     ++G + +GKG  V +EF 
Sbjct: 66  EQIKPNDIISKVTVTGP-FLNFAINKSALTKMILNQVAEEKEKFGGSTLGKGQNVIVEFS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P H GH R  ++G+ +A++    G+ V    ++ D G+Q   LA+    +  ++
Sbjct: 125 SPNIAKPFHAGHLRSTIIGNFIANIHKLLGFNVISMNWLGDWGSQFGLLAIGFEKYGSEE 184

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNFPEEKWLPIVKDYSVQA 240
            L  N    P  +   VY+K    +  D       K   + +   +E +L   K +   A
Sbjct: 185 ELKRN----PIRHLYDVYVKINADKAKDDNVRAQGKDFFKHMEMGDEAYLVKWKLFRSLA 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ ++     LN+  D+F  E +    D   +  ++ +L  +G            K   
Sbjct: 241 -LEDLKKTYGRLNVSFDVFTGESET---DWDLVGQVLKDLEAKG-------ISKMDKGCL 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++ +L              L K DGS  Y   D+A    ++    F    YV+ + 
Sbjct: 290 IVDLEKYKLGIA----------LLKKDDGSTLYLTRDIASAIKRHNTYSFSKCYYVVATQ 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K+L  +   +    A+    +         GM + MS R G  + L+ ++D+   
Sbjct: 340 QTLHFKQLFKILELLGYSWAKECYHISF-------GMVMGMSTRRGTAVFLQDILDDAKA 392

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      +G  +V       K  +  +++  ++       
Sbjct: 393 TMLENMQKNPEKISEIDENEREAVADKIGVSAVFVQDFNAKRIKDYEYNRERMTSFEGY- 451

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+ARC  + R++    P      F           +     LI+++A++  VI
Sbjct: 452 TGPYLQYAHARCCGVERKSGIEIPKASEVNFSL-------LTEKEAENLIMNIAKFGDVI 504

Query: 510 ENATIAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
            N     EP  L  YL++L    AS F               V+ +  ++   RL L + 
Sbjct: 505 MNTYRNLEPNTLVSYLFELSHVIASAFST-----------LRVKGSEPEIAKARLFLFYC 553

Query: 566 VASI 569
              +
Sbjct: 554 ARIV 557


>gi|51598847|ref|YP_073035.1| arginyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81609888|sp|Q660S8|SYR_BORGA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51573418|gb|AAU07443.1| arginyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 585

 Score =  306 bits (784), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 124/614 (20%), Positives = 232/614 (37%), Gaps = 72/614 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59
           +       +KN +  I   + + K I LD+I I  ++P     G +S      LS+ L L
Sbjct: 1   MTKSVKKNIKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLEL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIG 118
              TI+E I+  +K       +   G  ++N+ +    Y+   +  +      YG +   
Sbjct: 60  PIATISEEIIKTLKSKY---EIKAMGP-YLNIKIPRKEYINNTIQMVNAQKDSYGTSKYL 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I    
Sbjct: 116 DNKKIILEFSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSM 175

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIV 233
           L+ + ++   +    +     +  G +           E A+K   +LL   E+K    +
Sbjct: 176 LA-YKKFGNCITPEKAFKKGDHLIGEFYVEYNKYSQENENAEKEIQDLLLKWEQKDKNTI 234

Query: 234 KDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + +       I  I++  K  NI  D    E +      + + + +     +G+ Y+   
Sbjct: 235 ELWEKLNKWAIEGIKETYKTTNISFDKIYLESEIFEIGKNVVLEGL----EKGFCYKRED 290

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFD 350
                      D   +              + L++S+G+  Y   DL     +  E  FD
Sbjct: 291 GAICIDLPSDSDEKAEA---------KAKQKVLIRSNGTSIYLTQDLGNIAIRTKEFNFD 341

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIYV+GS+   + K L  V+  +   K +  + L   +    DG   KM  R G+ I  
Sbjct: 342 EMIYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLIDG---KMKSREGNVIDG 398

Query: 411 RHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +++ E                         +   ++ + +L     + + F+  K    
Sbjct: 399 DNLILELIESIMPEITQKIDNKENAKKNALNIALGAIHYYLLKSAVHKDIVFN-KKESLS 457

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QY  AR  SI  +   +   +         I  E      E ++I  ++E 
Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPI------IKKINFELLKHEKEWEIIKIISEL 511

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              I  A     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ +  
Sbjct: 512 EENIIKAAKDLNPSILTNYSYSLAKHFSAYYQ------EVKVIDINNTDLTAARIEFLKT 565

Query: 566 VASIINSGLNIIGV 579
           +   I + ++++ +
Sbjct: 566 ILQTIKNCMHLLNI 579


>gi|281358702|ref|ZP_06245179.1| arginyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314828|gb|EFA98864.1| arginyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 596

 Score =  306 bits (784), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 133/639 (20%), Positives = 242/639 (37%), Gaps = 105/639 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
            F   L+N+L++   K   E      + +E       G  + N    + R  G +P+  A
Sbjct: 4   QFVVDLENFLRDKFEKYPAE----PALAVEACPAGMTGDFALN-CFRIGRFCG-NPMQAA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   +K  PDV+ V +  K F+N+ +    L +   + V   +E  +    +  ++ I
Sbjct: 58  AAVAEFLKGHPDVEGVEVV-KAFVNVTVKAGALHRDSVAAVERLLEAAKLPEAQRKRILI 116

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           EF + N   P H+GH R   +G +LASL+   G++V     +ND G  I    ++ + R+
Sbjct: 117 EFSAPNTNKPQHLGHVRNNTLGMSLASLLKRVGHDVIEINLVNDRGIHICKSMIA-YQRF 175

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG--------------KELADKYSSELLNFPE--EKW 229
                   + +   +  G +                    ELADK S EL    E     
Sbjct: 176 GNGCTPESTGMKGDHLVGKFYVEYNKALSEEIKVLKAARPELADKDSEELFLETELGRAT 235

Query: 230 LPIVKDY-----SVQAMMKIIR--------DDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             +++D+     +V+ + K++            + + I  D    E + +       +DI
Sbjct: 236 QKMLQDWEAGDPAVRELWKMMNGWVFAGFAQTYERMGIHFDHTYLESETYLLG----KDI 291

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     +G      +   +      CD+            G    + +L+SDG+  Y   
Sbjct: 292 VAAGLEKG------VFAKREDGAVFCDL------------GKLGKKVVLRSDGTSVYITQ 333

Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRD 394
           D+     K+E    ++M++V+G + + + + L  +   +    A Q+  L   +V L   
Sbjct: 334 DIGTTLKKFEDYHPESMVWVVGDEQNLHFQMLFEIMKRLGYPWADQLYHLSYGMVNLPTG 393

Query: 395 GMPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRFMM 426
               KM  R G  +    + DE                            +G  +++FM+
Sbjct: 394 ----KMKSREGTVVDADDLFDEMAKLATDACKERGGEELDPAELAERGEIIGLGALKFML 449

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L       + FD      + + +   Y+QYA AR  SI R+A +   D         ++ 
Sbjct: 450 LKFNPKTTIMFDPA-ASLKFEGDTGPYIQYAAARINSIERKAAERGIDFSPAKVDWALLA 508

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                  +E  L V    YP V++ A   ++   LA YL +LA  F+  +          
Sbjct: 509 H-----PAEKALAVTAGFYPAVLKLAAERRDCSGLAEYLLNLAKAFNRFYREC------P 557

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            + A   +L   RL +  AV +II  GL  + ++ P  M
Sbjct: 558 VLAAETPELVAGRLAMADAVRTIIVDGLATLTIKVPQAM 596


>gi|145232355|ref|XP_001399626.1| arginyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
 gi|134056541|emb|CAK47665.1| unnamed protein product [Aspergillus niger]
          Length = 646

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 114/655 (17%), Positives = 216/655 (32%), Gaps = 122/655 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +   +   L +I       +KI  RI      D   G L      +    +  +P  + +
Sbjct: 38  YREHIAEELAKIT--GLDAEKIFSRIAWTNSLDK--GDLVLPVPSL---QIKKNPQELCK 90

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRN 115
            +V +      +      G   +  +  P  L   + S ++            G+    +
Sbjct: 91  ELVEKFPESDLILPPVAFGPH-MQFFFRPERLTTNVVSRILKEKSAFGTNGNVGLRDPAD 149

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q  
Sbjct: 150 PSKGRKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYG 209

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK--------------------------HV 209
            LA        +     D   P  +   VY+K                            
Sbjct: 210 LLANGFKMFGSEEELTKD---PINHLFNVYVKINGIVSEQEGPIKELKEQIKAKKEKGED 266

Query: 210 GKELADKYSSELLNFPEE--------------KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             E   + +  +    +E              + L + + +   ++ K  R     LNI 
Sbjct: 267 AAEQEKELAKLVDASEDENARRYFKSMEDGNQEALALWRRFRELSIEKY-RQTYARLNID 325

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E    +   +   + ++                        +     ++   T 
Sbjct: 326 FDVYSGESQIKQESMTSAYETMEK-------------------VGVSEKSEGAVIVDFTK 366

Query: 316 VGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAA 372
            G        +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +  
Sbjct: 367 HGAKKLGKAIIVRKDGTPLYLTRDIGAILEREEAYKFDKMIYVVAAQQDLHLAQLFKITE 426

Query: 373 AVSEKK--AQINVLLCELVR-----------------LYRDGMPIKMSKRAGDFITLRH- 412
            +  K   ++   +   +VR                   RD M   M K    +  +   
Sbjct: 427 LMGYKDLASRCQHINFGMVRGMSTRKGTVKFLDDILQDVRDKMHEVMKKNTEKYEQVADP 486

Query: 413 --VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
               D +G  SV    +  K     DF+   +    + +   Y+QYA+AR  SI R++  
Sbjct: 487 EGTADILGMSSVMVQDMTGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLCSIVRKSGL 545

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              +LD               +T    L   LA++P V+ N T   EP  +  YL+ +  
Sbjct: 546 NVDELDTANLSL-------LTETHATDLARLLAQWPDVLLNTTRTLEPTTILTYLFRMTH 598

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V    +   +       V  +  +L   R+ L  +   ++++G+ I+G+   N M
Sbjct: 599 VLSSSYDVLK-------VVGSEPELKKARMALYESARQVLHNGMRILGLSPVNRM 646


>gi|167376072|ref|XP_001733845.1| arginyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165904864|gb|EDR29997.1| arginyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 573

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 120/604 (19%), Positives = 230/604 (38%), Gaps = 99/604 (16%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS--RPLGLDPLTIAELIV 69
           K+  + I     +     +R  +E  +    G  S   A I+   +    +P  +A  + 
Sbjct: 7   KSIAETISSVAGIPIDFAER-SVELCKKKELGDFSVPVAKIIRQMKTEEKNPNIVASQLA 65

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +IK +  +  V + G  F+N  ++ S L K+ L+ +     ++G + +G+G  V +EF 
Sbjct: 66  EQIKPNDIISRVTVTGP-FLNFAINKSALTKMILNQVAEEKEKFGGSTLGEGQNVIVEFS 124

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P H GH R  ++G+ +A++    G+ V    ++ D G+Q   LA+    +  ++
Sbjct: 125 SPNIAKPFHAGHLRSTIIGNFIANIHKLLGFNVISMNWLGDWGSQFGLLAIGFEKYGSEE 184

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNFPEEKWLPIVKDYSVQA 240
            L  N    P  +   VY+K    +  D       K   + +   +E +L   K +   A
Sbjct: 185 ELKRN----PIRHLYDVYVKINADKAKDDNVRAQGKDFFKHMEMGDEAYLVKWKLFRSLA 240

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ ++   + LN+  DIF  E +    D   +  ++ +L  +G            K   
Sbjct: 241 -LEDLKKTYERLNVSFDIFTGESET---DWELVDQVLKDLEAKG-------ISKMDKGCL 289

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359
             D+++ +L              L K DGS  Y   D+A    ++    F    YV+ + 
Sbjct: 290 IVDLEKYKLGIA----------LLKKDDGSTLYLTRDIASAIKRHNTYSFSKCYYVVATQ 339

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + K+L  +   +    A+    +         GM + MS R G  + L+ ++D+   
Sbjct: 340 QTLHFKQLFKILELLGYSWAKECYHISF-------GMVMGMSTRRGTAVFLQDILDDAKA 392

Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                      +G  +V       K  +  +++  ++       
Sbjct: 393 TMLENMQKNPEKISEIDENERETVADKIGVSAVFIQDFNAKRIKDYEYNRERMTSFEGY- 451

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+ARC  + R++    P      F           +     LI+++A++  VI
Sbjct: 452 TGPYLQYAHARCCGVERKSGIEIPKASEVNFSL-------LTEKEAENLIMNIAKFGDVI 504

Query: 510 ENATIAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
            N     EP  L  YL++L    AS F               V+ +  ++   RL L + 
Sbjct: 505 MNTYRNLEPNTLVSYLFELSHVIASAFST-----------LRVKGSEPEIAKARLFLFYC 553

Query: 566 VASI 569
              +
Sbjct: 554 ARIV 557


>gi|115495861|ref|NP_001069346.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Bos
           taurus]
 gi|122144258|sp|Q0P5H7|SYRM_BOVIN RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|112362204|gb|AAI20021.1| Arginyl-tRNA synthetase 2, mitochondrial [Bos taurus]
 gi|296484057|gb|DAA26172.1| arginyl-tRNA synthetase 2, mitochondrial precursor [Bos taurus]
          Length = 578

 Score =  306 bits (783), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 119/622 (19%), Positives = 229/622 (36%), Gaps = 91/622 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL------SRPLGLD 60
           F   + + L  +   +  E  I     +   R         +   +L      SRP   D
Sbjct: 5   FRRSIASQLSRVL-DLPPENLIKSISAVPISRKEEVADFQLSVDSLLENNNDHSRP---D 60

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIG 118
               A  +  ++K D  V  +   G+G +N  ++   L K  L  ++  G +YG ++ + 
Sbjct: 61  IQIQAMRLAEKLKCDTVVSEIS-TGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELF 119

Query: 119 KG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            G    ++ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q  
Sbjct: 120 SGLPKKRIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFG 179

Query: 176 TLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLP 231
            L        Y++ L ++        Y  V  +    +   K + E    L   + + L 
Sbjct: 180 LLGTGFQLFGYEEKLQSSPLQHLFEVYVQVNKEAADDKNVAKSAHEFFQRLELGDMQALA 239

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + + +   ++ + +R   + L +  D +  E  F+R     +  ++D             
Sbjct: 240 LWQKFRDLSIDEYMRI-YQRLGVHFDEYSGES-FYREKSQEVLKLLD------------- 284

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
               SK   +  +    ++  S          +++SDG+  Y   DLA    + E+  FD
Sbjct: 285 ----SKGLLQKTLKGTAVVDLSGNGDPSSVCTVMRSDGTSLYATRDLAAAIDRMEKYNFD 340

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIYV       + +++  +   +    A       E  +    G+   M  R GD   L
Sbjct: 341 KMIYVTDKGQKKHFQQVFQILQIMGYDWA-------ERCQHVPFGVVQGMKTRRGDVTFL 393

Query: 411 RHVVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVK 443
             V++E+    ++ M   +   EL                             F + +V 
Sbjct: 394 EDVLNEIRLRMLQNMASIKTTKELENPEETAEQVGLAALIIQDFRGFLLSDYQFSWDRV- 452

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            QS+ +   ++QY +AR  S+            F     N        +   + ++ HL 
Sbjct: 453 FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLL 503

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +  V+  ++   +P  +  YL  L+ +            R   V+ +  ++   RL L 
Sbjct: 504 RFDEVLYRSSQDLQPRHIVSYLLTLSHL-------AAVAHRTLHVRNSPPEVAGARLHLF 556

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV S++ +G+ ++G+     M
Sbjct: 557 RAVRSVLANGMKLLGITPVCRM 578


>gi|254417711|ref|ZP_05031435.1| arginyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196183888|gb|EDX78864.1| arginyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 600

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 119/626 (19%), Positives = 220/626 (35%), Gaps = 70/626 (11%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
            AD  + L   +        V+  +     +            +N A+  ++ L  +P  
Sbjct: 1   MADLKTVLSEAVAAAFAAEGVDAALAR---VTPSDRPDLADFQSNGALAAAKALKANPRE 57

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  I  R+  DP   SV +AG GFINL L+ + L +  + +       G  ++    KV
Sbjct: 58  LAGRIAERLSSDPRFASVEVAGPGFINLKLADALLAERAAEVAADAEHAGSAVVADPRKV 117

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-- 181
            I++   N   PMHVGH R A++G++L  L  F G  VT + +  D G Q+  L ++   
Sbjct: 118 VIDYGGPNVAKPMHVGHLRSAIIGESLKRLFRFRGDHVTGDAHFGDWGFQMGLLIVACGD 177

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------- 232
               +  L   D   P      +        LA   + E   F +               
Sbjct: 178 EGLAEGFLAEGDGPFPADSPVTLADLDRLYPLAAGKAKEDPAFRDRARKATAELQNGRPG 237

Query: 233 ---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              +  + V    + ++ +   L++  D++  E D     P    +++ +L   G + E 
Sbjct: 238 YRALWTHFVAVSREALKREYGDLSVDFDLWNGESDADPLMP----EMLAHLKATGLLVED 293

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RG 348
                           +K                ++ S+GS  Y   DLA    + +   
Sbjct: 294 DGAQVVHVAKPGETRKKKLADGSVIEAPSPPPLLVISSEGSAMYGTTDLATILDRKKALA 353

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D  +YV+    + + +++   A             L       +DG P K   RAG  +
Sbjct: 354 PDLALYVVDERQAEHFEQVFRAAYLAGYAAEGSLEHLGFGTMNGQDGKPFK--TRAGGVL 411

Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
            LR ++D+                             V   +++F  L    +    FD 
Sbjct: 412 KLRDLIDQATDKARERLHEAKLGDDLSPEEFEAIAHKVAIAALKFADLSNARTTSYVFDL 471

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +     +     Y+ Y   R +S+ R+A +          P  ++  E     +E  L 
Sbjct: 472 DR-FMSFEGKTGPYLLYQSVRIKSLLRKAAEQGAT------PGAIVIAEQ----AERDLA 520

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           + L  +   + +A   + P+ +A + Y +A  F   ++          + A +      R
Sbjct: 521 LTLDAFSTAVSDAYDKRMPHLVAEHAYRVAQSFSKFYAAC------PVLVAPDEATRASR 574

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  A    + + L ++G+E+P  M
Sbjct: 575 LALSAAALRQLETALTLLGIETPERM 600


>gi|315046758|ref|XP_003172754.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311343140|gb|EFR02343.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 634

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 127/609 (20%), Positives = 219/609 (35%), Gaps = 110/609 (18%)

Query: 46  STNAAMILS----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--- 98
           +TNA ++L     +  G++P  +A+ IV++    P ++   +A   F+ L  SP  L   
Sbjct: 67  ATNADLMLVTARLKLKGINPKQLAQDIVSKFPSTPLLNPP-VANGIFVPLSFSPDTLPNL 125

Query: 99  --------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
                   R    S  + G++  ++      KV +EF S N     H GH R  ++G  +
Sbjct: 126 ILPFIFDRRASYGSNQLQGLQDPKDESSGKKKVIVEFSSPNIAKEFHAGHLRSTIIGAYI 185

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++L    G++V R  Y+ D G Q   LA+       + L+  +   P  +   VY K   
Sbjct: 186 SNLYESMGWDVVRVNYLGDWGKQFGLLAVGWQRFGSEELFAKE---PLKHLLEVYAKINS 242

Query: 211 KELADKYSSELLN--------------FPEE-KWLPIVKDYSVQ--AMMKIIRD------ 247
               +K +SE                 F E   +   ++D      A+ K  RD      
Sbjct: 243 LFAPEKEASEQARDRGEDTSEIESKGLFAERNAFFQKMEDGDPDAIALWKRFRDVSIERY 302

Query: 248 --DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 LNI+ D++  E          +      L  +G          +   T   D  
Sbjct: 303 ISTYARLNIKFDVYSGESTV---KALTVEKAELLLKEKG-------VYTEDNGTWIIDFK 352

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
           +      +  +G  V R  +   G+ TY   D+A    + E+  FD MIYV+ ++   Y 
Sbjct: 353 KHG----APNLGIAVARTRI---GTTTYLLRDVAAVLERVEKYQFDKMIYVVSTEQDLYF 405

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
           +RL      +        +           G    MS R G    L  ++DE        
Sbjct: 406 QRLFKTIELMGYPDVAAKLEHVNF------GKVQGMSSRLGTVKILSDILDECGSAMHNV 459

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G  +V    +  K      FD  K+    + +   Y+QY
Sbjct: 460 MRKNPTKYDQIEKPAEVADILGITAVMVQDMAGKRIHNYPFDIAKMTSF-EGDTGPYLQY 518

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI R+       +D D             +   + ++  +A+YP V  NA    
Sbjct: 519 AHARLCSIVRK-------VDIDPQEITTANFSLLKEPHAINILRLMAQYPDVTCNALKTL 571

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           EP     YL+ LA      +        ++ + A + ++T+ RL L      ++ +G+ +
Sbjct: 572 EPTTTLTYLFRLAHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENGMRL 625

Query: 577 IGVESPNEM 585
           +G      M
Sbjct: 626 LGFSPVKRM 634


>gi|225011678|ref|ZP_03702116.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004181|gb|EEG42153.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 595

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 116/612 (18%), Positives = 209/612 (34%), Gaps = 96/612 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +     +  R    G L T     L R +   P  +AE I   +  +  +   F   KGF
Sbjct: 25  ISDFEFQSTRKEFSGDL-TLVVFPLLRQVKARPEIVAEEIGNYLVSNLSIVEGFNVVKGF 83

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +NL LS  +     S           ++      V +EF S N   P+H+GH R  V+G 
Sbjct: 84  LNLVLSDLFYINQFSEFYKISEYGHTSVTDSSPTVMVEFSSPNTNKPLHLGHIRNNVLGY 143

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           ++A ++  +G  V +   IND G  I   ++  + ++        S L      G Y   
Sbjct: 144 SVAKILEANGKRVIKTQIINDRGIHICK-SMVAWEKFGNQETPESSGLKGDQLVGKYYVK 202

Query: 209 VGKELADK----------------------YSSELLNFPEEKWLPIVKDYSVQAMM--KI 244
             KE   +                       + E+L   E     +V  +        K 
Sbjct: 203 FDKEYKKEVASLVADGQSDEEAKLNAPLLLEAQEMLRKWEANDTTVVDLWETMNQWVYKG 262

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                K L +  D +  E D +      I        ++G   +                
Sbjct: 263 FEVSYKNLGVSFDSYYYESDTYLLGKDII--------KKGLSNQIFYKK----------- 303

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSG 362
           +   +    T  G D ++ LL++DG+  Y   DL   + + E       M+Y +G++   
Sbjct: 304 EDGSVWVDLTEEGLD-EKLLLRADGTSVYMTQDLGTAQKRLEDVPALKGMVYTVGNEQDY 362

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-------- 414
           + K L  +   +    A     L   +     G   KM  R G  +    ++        
Sbjct: 363 HFKVLFLILKKLGFDWANSLYHLSYGMVDLPSG---KMKSREGTVVDADDLIKDMVEQAR 419

Query: 415 ---------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                + +   ++++ +L     + + FD          N   +
Sbjct: 420 TISEAVGKLDSLDDMEKDSLFETIALGALKYYILKVDPKKRILFDPE-ASIDFNGNTGPF 478

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY +AR +++ ++A         D          S  D  E ++I  L  YP V+  A 
Sbjct: 479 IQYTHARIKTLIQRA---------DFQNIGNFDTLSILDQKEREVIKQLGNYPEVVTLAG 529

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A Y+YDL   ++  + +      +  + ++N      R+ L   VA +I +G
Sbjct: 530 AQYSPALIANYIYDLVKSYNTFYQN------VSVLGSDNLVQKNFRIALSQKVAEVIYNG 583

Query: 574 LNIIGVESPNEM 585
             ++G+  PN M
Sbjct: 584 CGLLGINVPNRM 595


>gi|240120047|ref|NP_852071.2| probable arginyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|115502849|sp|Q3U186|SYRM_MOUSE RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|74220703|dbj|BAE33614.1| unnamed protein product [Mus musculus]
 gi|123232893|emb|CAM26873.1| arginyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
 gi|148673526|gb|EDL05473.1| arginyl-tRNA synthetase-like, isoform CRA_a [Mus musculus]
          Length = 578

 Score =  305 bits (781), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 109/561 (19%), Positives = 199/561 (35%), Gaps = 81/561 (14%)

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-SGIEYGRNLIG-- 118
              A  +  ++K D  V ++  AG   +N  ++   L K +   V   G +YG       
Sbjct: 62  QDQARRLAEKLKCDTVVTAIS-AGPRTLNFKINRELLTKAVLQQVTEDGCKYGLKSELFS 120

Query: 119 --KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                ++ +EF S N     HVGH R  ++G+ +A+L    G++VTR  YI D G Q   
Sbjct: 121 DLPKKRIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGL 180

Query: 177 LALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPI 232
           L        Y++ L  N        Y  V  +    +   K + E    L   + + L +
Sbjct: 181 LGTGFQLFGYEEKLQTNPLQHLFDVYVQVNKEATDDKNVTKLAHEFFHRLEMGDTQALSL 240

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            + +   ++ +      K L I  D +  E  F+R      +D++  L  +G + +    
Sbjct: 241 WQRFRDLSI-EEYTQIYKRLGIYFDEYSGES-FYREKS---QDVLKLLDSKGLLQKTAEG 295

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
                 +   D+     + R              SDG+  Y   DLA    + ++  FD 
Sbjct: 296 NVVVDLSGTGDLSSVCTVMR--------------SDGTSLYATRDLAAAIHRMDKYNFDT 341

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           MIYV       + +++  +   +    A       E  +    G+   M  R G    L 
Sbjct: 342 MIYVADKGQRRHFQQVFQMLKIMGYDWA-------ERCQHVPFGIVKGMKTRRGGVTFLE 394

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            V++E                           VG  +V              F + +V  
Sbjct: 395 DVLNEVQSRMLQNMASIKTTKQLENPQETAERVGLAAVIIQDFRGTLLSDYQFSWDRV-F 453

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS+ +   ++QY +AR  S+            F     N        +   + ++ HL  
Sbjct: 454 QSRGDTGVFLQYTHARLCSLEE---------TFGCGYLNDSNVACLQEPQSVSILQHLLR 504

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V+  ++   +P  +  YL  L+ +            +   V+ +   +   RL L  
Sbjct: 505 FDEVLYLSSQDLQPKHIVSYLLTLSHL-------AAVAHKTLQVKDSPPDVAGARLHLFK 557

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV S++ +G+ ++G+     M
Sbjct: 558 AVRSVLANGMKLLGITPVCRM 578


>gi|325283885|ref|YP_004256426.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315694|gb|ADY26809.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 609

 Score =  305 bits (781), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 145/627 (23%), Positives = 237/627 (37%), Gaps = 105/627 (16%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
             LD  + E P     G   T AA  L++ LG +P  +A+ +   I++   +  V  AG 
Sbjct: 20  AELDPAIQETPAGKK-GDYGTPAAFQLAKMLGRNPAEVAQDLARSIQLPAGIARVEAAGP 78

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
            F+N ++        ++  V   +E    +  +  KV IE  S NP   +HVGH R  V+
Sbjct: 79  -FLNFFVD-------VADFVRGVVENPTPMPQQEGKVVIEHTSVNPNKELHVGHLRNVVL 130

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           GD+LA +M  +G+ V  + YI+D G Q    A S+F R    L  +  +  + +    Y+
Sbjct: 131 GDSLARIMRAAGHTVEVQNYIDDTGRQ---AAESLFARDFYHLEWDGQEKYDHWMGKGYV 187

Query: 207 K---HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           +      K   ++    +++  E   L    +  VQA +    D    L  ++D+   E 
Sbjct: 188 RLNADPAKPEQEEGIRAVMHRLEAGELRAEIERIVQAHL----DTCFRLGARYDLLNWES 243

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           D        +   ++ L    Y       P + K      MD  + +       ++ +  
Sbjct: 244 DVV--GSGFLSKAMNILEESRYT----SRPTEGKYAGAFVMDVSEFM----PGLEEPNVV 293

Query: 324 LLKSDGSYTYFAADLAYFKCKY-------------------------------ERGFDN- 351
           L++SDG+  Y A D+ Y   K+                               ER F + 
Sbjct: 294 LVRSDGTAMYAAKDIGYQFWKFGLFEGMKFKPFATDPEGNTVWTSAPDGEPDTERRFGHA 353

Query: 352 --MIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +I V+ S  +    V R     A   EKK +   L    V L        +S R G  
Sbjct: 354 AEVINVIDSRQNHPQTVVRSSLGVAGEQEKKDRSIHLSYAFVTL----EGQTISGRKGIA 409

Query: 408 ITLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFDF 439
           +    V+DE                            +G  ++RF ML  + +  +DF +
Sbjct: 410 VAADEVMDEAVQRSLKLLGEINPELAAREDAAEIARRIGIGAIRFAMLKAEPTRQIDFRW 469

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
                 +  +   YVQYA  R  +I R+A+     +D        +P         L L 
Sbjct: 470 DSALALT-GDTAPYVQYAAVRAGNILRKAEAEGYAVDGSGADWAALPDID------LALA 522

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH-GRENPRLRFVQANNRKLTMM 558
             +A  P V+E AT    P+ +A Y  DLA+ F+  ++   +       V  +   L   
Sbjct: 523 KAVARLPEVVEQATRIHSPHVVAQYALDLATTFNSWYNAKDKVGKPATNVLQSPEGLREA 582

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL LV  V       L++IG+E P  M
Sbjct: 583 RLALVGRVRRAFEETLDLIGIEVPAAM 609


>gi|163752874|ref|ZP_02159998.1| arginyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161326606|gb|EDP97931.1| arginyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 592

 Score =  305 bits (781), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 114/640 (17%), Positives = 220/640 (34%), Gaps = 103/640 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +    + ++K   + +          L+ +  +  R    G + T     + R   ++
Sbjct: 1   MNIQDVLTKKVKEAFETLYNA------TLNTVEFQATRKDFEGDI-TVVVFPMLRVKKMN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + +   +  +    + F   KGF+NL +  SY     +    +            
Sbjct: 54  PAQLGQELGQYLVENVAAVNRFNVVKGFLNLVIDDSYYLNFFAEANKNDAFGHETSKAGD 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +E+ S N   P+H+GH R  ++G ++A ++  SG +V +   IND G  I    L+
Sbjct: 114 KAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAEIIKASGKKVYKTQIINDRGIHICKSMLA 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----------------------YS 218
            + R+        + L      G Y     K    +                       +
Sbjct: 174 -WQRFGNGETPQSTGLKGDKLVGNYYVAFDKAYKAEIAQLIAEGKTEDDAKKEAPILLEA 232

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E+L   E     IV  +            +    L +  D    E D +          
Sbjct: 233 QEMLRKWEAGDEEIVALWKQMNQWVYDGFAETYTNLGVDFDALYYESDTY---------- 282

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  + +V EG++             D   +    T  G D ++ +L+SDG+  Y   
Sbjct: 283 ---LLGKDFVKEGLVSGVFYMK------DDGSVWCDLTEEGLD-EKIVLRSDGTAVYMTQ 332

Query: 337 DLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           D+     + +   D   MIY +G++   + K L  +   +  + ++    L   +     
Sbjct: 333 DIGTAIQRVKDYPDIGGMIYTVGNEQDYHFKVLFLILKKLGFEWSKNLHHLSYGMVDLPS 392

Query: 395 GMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425
           G   KM  R G  +    ++ E                             +G  ++++ 
Sbjct: 393 G---KMKSREGTVVDADDLMQEMVDTAKQIANEKGKLDGYSEEEKNSIHNKIGLGALKYQ 449

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML     + + FD     +    +   ++Q  Y R R+I R+A           F  + +
Sbjct: 450 MLKVDPKKRILFDPEDSIDF-NGDSGPFIQMMYVRTRAILRKAN----------FDYSEV 498

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
               E    E +L+  L  YP VI+ A   Q P  +A Y +DL+  F  ++        +
Sbjct: 499 ITNIELHEKEKELLKVLENYPTVIQTAASNQSPALIANYAFDLSKEFSSYYQ------MV 552

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +   ++   + R+QL   +   I     ++G++ P  M
Sbjct: 553 SILGETDKAKKVFRVQLSKKIGDTIKLAFGLLGIQVPERM 592


>gi|32490878|ref|NP_871132.1| hypothetical protein WGLp129 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340440|sp|Q8D372|SYR_WIGBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|25166084|dbj|BAC24275.1| argS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 576

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/622 (18%), Positives = 220/622 (35%), Gaps = 83/622 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       +KN LK  +  ++  K    +           G+   +    +     ++
Sbjct: 1   MNIKNILLKNVKNALKPSNLDLRNLKIKKTK-------FKKFGNYQIDGIFSILNKNKIN 53

Query: 61  PLTIAELI--VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
              +   I  +  +K+    + +     G+IN++L  S++   L  I  S       L  
Sbjct: 54  LNELLNKILPIINMKLINVSEKIEFVKPGYINIFLKKSWIEDNLLKIYHSNKLGISKL-- 111

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K   + I++ S N    MHVGH R  ++GD+++ ++   G++V R  +I D G Q   L 
Sbjct: 112 KKKTIIIDYSSPNIGKEMHVGHMRSTIIGDSISLILELLGHKVIRANHIGDWGNQFGMLL 171

Query: 179 LSVFWRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                +             E YY      Y K +  +   ++ +  L   E+  + I K 
Sbjct: 172 AYFNEKQNLKFSEITCTDLENYYINAKKKYDKDLEFKKKSQFFTLKLQKKEKDCINIWKK 231

Query: 236 YSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +  ++    +     LNI+ +    + E  ++      +  II +L ++          
Sbjct: 232 ITNLSIENNQKI-YDQLNIKLNKTHIMGESLYN----DFVPYIISDLPKKNLAINKSGNI 286

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352
                  K               G  +   L K +G+Y Y   D+A  K +Y+      +
Sbjct: 287 MVILNNFK------------NKQGKSMGVILKKRNGTYLYSVIDIACIKYRYDFFKAQKI 334

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           IY   S  S ++ ++  +           ++      +V L +D  P K   R+GD I L
Sbjct: 335 IYYTDSRQSQHLLQVFDIVRKAKYIPNFVKLEHHKFGMV-LKKDKTPFK--TRSGDTIKL 391

Query: 411 RH---------------------------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                                        +   +G  S+++  L +       F++  + 
Sbjct: 392 SDLLKKSKEKAKKLIIKKNPNTSIDEIESLSQAIGIGSIKYFELSKNRETDYIFNWDNIL 451

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QYAY R  S+ ++ K    +    L  +            E+ L + L 
Sbjct: 452 SF-NGNTAPYIQYAYTRVISLIKKNKLKNKNNVKFLLKK----------EEEIDLSICLL 500

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++  +I + +    P+ L  YLYDL+  F   + +         ++     +   RL L 
Sbjct: 501 QFEEIINDVSKLGTPHILCNYLYDLSKTFSVFYENC------SIIKTKEESVKNSRLFLS 554

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              +  +  GL ++G+    +M
Sbjct: 555 ILTSRTLKVGLELLGIPMVEKM 576


>gi|332218449|ref|XP_003258367.1| PREDICTED: LOW QUALITY PROTEIN: probable arginyl-tRNA synthetase,
           mitochondrial-like [Nomascus leucogenys]
          Length = 578

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 117/620 (18%), Positives = 229/620 (36%), Gaps = 87/620 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLT 63
           F   +   L  +   +  E  I     +   +         +   +L +       D   
Sbjct: 5   FRRAIACQLSRVL-NLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDIQV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG- 120
            A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG ++ +  G 
Sbjct: 64  QAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGL 122

Query: 121 --TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ D G Q   L 
Sbjct: 123 PQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLG 182

Query: 179 LSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
                  Y++ L +N        Y  V  +    +   K + E    L   + + L + +
Sbjct: 183 TGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQ 242

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + IR   K L +  D +  E  F+R       +++  L  +G + + I    
Sbjct: 243 KFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---EEVLKLLESKGLLLKTI---- 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             K T   D+            GD      +++SDG+  Y   DLA    + ++  FD M
Sbjct: 294 --KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTM 342

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IYV       + +++  +   +    A       E  +    G+   M  R GD   L  
Sbjct: 343 IYVTDKGXKKHFQQVFQMLKIMGFDWA-------ERCQHVPFGVVQGMKTRRGDVTFLED 395

Query: 413 VVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDFCKVKEQ 445
           V++E+    ++ M   +   EL                             F + +V  Q
Sbjct: 396 VLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSWDRV-FQ 454

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S+ +   ++QY +AR  S+            F     N        +   + ++ HL  +
Sbjct: 455 SRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSILQHLLRF 505

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+  ++   +P  +  YL  L+ +            +   ++ +  ++   RL L  A
Sbjct: 506 DEVLYKSSQDLQPRHIVSYLLTLSHL-------AAVAHKTLQIKDSPPEVAGARLHLFKA 558

Query: 566 VASIINSGLNIIGVESPNEM 585
           V S++ +G+ ++G+     M
Sbjct: 559 VRSVLANGMRLLGITPVCRM 578


>gi|330872047|gb|EGH06196.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 476

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/492 (20%), Positives = 190/492 (38%), Gaps = 52/492 (10%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPSDEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
           + +        DD   P++  K+ G Y Y   DLA  + + +    D + Y +    + +
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVQYFVDQRQALH 346

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE------ 416
            +++  VA         + +       +   DG P K   R G  + L  ++DE      
Sbjct: 347 FQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAY 404

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                VG  +V++  L +  +    F+F ++    + N   Y+ 
Sbjct: 405 TLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLL 463

Query: 456 YAYARCRSIFRQ 467
           YAY R   +FR+
Sbjct: 464 YAYTRVAGVFRK 475


>gi|224008801|ref|XP_002293359.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970759|gb|EED89095.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 553

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 113/586 (19%), Positives = 221/586 (37%), Gaps = 96/586 (16%)

Query: 51  MILSRPLGLD---------PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRK 100
           M L + L            P  +A+ I+  +  D P +  + + G GFI   +   YL +
Sbjct: 1   MPLFQKLKAAGCLPEGVNSPQDVAKAIIDAVPSDNPVLCEMNVNGPGFIMSRIKREYLER 60

Query: 101 ILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++ I+ +G        G+         V ++F S N    MHVGH R  ++G+++  ++
Sbjct: 61  GVNHIIKNGAPTKPKSAGRNDASGGGGVVVVDFSSPNIAKEMHVGHLRSTIIGESVCRIL 120

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKE 212
           ++ G++V R  ++ D G Q   L   +   Y     +  N +DL E Y           E
Sbjct: 121 SYVGHDVKRINHVGDWGTQFGMLIQYLKEEYPDFHGDIPNITDLTEFYKNAKMRFDESPE 180

Query: 213 LAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE--DDFHRG 268
                + +   L   +E+   I      Q +  + R + + +  + DI + E  + F+  
Sbjct: 181 FKKISQLNVVKLQAGDEECRKIW-----QVLCDVSRKEFEKVYDRLDITVEECGESFYN- 234

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I  +I+    +G V                +    + +F   +    V   L KSD
Sbjct: 235 --DKIAPVIEEFDSRGLV--------------SVEEGGAKCVF---VPKYKVPLMLQKSD 275

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE---KKAQINVL 384
           G Y Y + D+A  K + +      ++Y+       + + + A A  +        +++ +
Sbjct: 276 GGYGYDSTDMAAIKYRLDQMKASQIVYITDFTQGDHFQMVFAAAKKIGWVSEDSHRLDHI 335

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               V+   DG   +   R+GD + L  ++DE                            
Sbjct: 336 GFGTVQ-GEDGK--RFKTRSGDTVRLVDLLDEAVSRMETSLKERATDGKAAVDDAEIHAT 392

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              +G  +V++  L R  +    F + ++ + +K N   Y+ YA+AR  SI  + K  F 
Sbjct: 393 ASAMGYGAVKYFDLRRNPTSNYIFSYDRMLD-TKGNTAIYLLYAHARLESIISKGKAEF- 450

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
            +D D   +    +      SE  L +HL  +   +E       PY +  ++Y L++   
Sbjct: 451 GVDVDELIKAGKAKIILAHKSERNLGLHLEFFADAVEETLNDLFPYHICDFVYALSNAAS 510

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                     + + + +   +    RL L  A A  +    +++G+
Sbjct: 511 EF------VTQCKVLGSPEME---SRLLLCRATAISMRQCFDLLGI 547


>gi|162447348|ref|YP_001620480.1| arginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985455|gb|ABX81104.1| arginyl-tRNA synthetase, class 1c [Acholeplasma laidlawii PG-8A]
          Length = 559

 Score =  304 bits (779), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 114/610 (18%), Positives = 227/610 (37%), Gaps = 89/610 (14%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            ++K  L+++          ++ +V+E P+      L+        + +G     I +L 
Sbjct: 6   EQIKLELRQLLFDHL----DIEDVVLEVPK-RGDSDLAIPL-FGYQKQMGKKLPEIFDLF 59

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
              +     V+SV     GF+N+YL    + K + + +    +           + I++ 
Sbjct: 60  KDILIQHRLVESVVFT-AGFLNIYLKRVDVSKSILNSIHDEKQSFGTQPNNNKTIVIDYS 118

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N      VGH R  V+G++L  +    GY V    ++ D G Q  ++ ++   W  + 
Sbjct: 119 SPNIAKSFSVGHLRSTVIGNSLKLIYQKLGYNVVGINHLGDWGTQFGSMMVAYRMWGDKD 178

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-DYSVQAMMKIIR 246
            +  N    P      +Y++      A +    L     + +L + + D     +    R
Sbjct: 179 KIKAN----PIDELQALYVRF---HEAAEKDESLKQKARDAFLKLEQGDPEYTKLWTYFR 231

Query: 247 D-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  L+     +DI     D + G+      +  ++  L  +  + E              
Sbjct: 232 EVSLQEFMTMYDILDVSFDSYNGEAFYNDKMDRVVKELEDKHLLVE-------------- 277

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
             D+  ++ +   + DD    L+K SDG+  Y   DLA    + +   FD  +YV+G++ 
Sbjct: 278 --DQGAMVVK---LEDDTPPVLIKRSDGATLYTTRDLAALLYRNDTYHFDKALYVVGNEQ 332

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--------------- 405
             + + L+ V   +       N+       + +DG   KMS R G               
Sbjct: 333 KLHFENLKKVVKMMGYD---FNIEHINFGLVLQDGK--KMSTRKGKTTKLDYVLNQAVLK 387

Query: 406 ----------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                     +      V   VG  +V F  L    +  ++FD   + +  +     Y+ 
Sbjct: 388 AKQAIEEKNPNLENKDQVAKVVGIGAVIFNDLKNDRTLNIEFDLDGMLKF-EGQTGPYLL 446

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y+  R  SI +        +D+ L+           D     LI  L ++P V++ A  +
Sbjct: 447 YSIVRIFSILKSNTIDITQVDYTLYQ----------DEIYYSLIKVLDQFPSVVQRAAES 496

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
             P  +A YL  L+  F+  ++  +       +  +N  +    L LV ++ +I+  GL 
Sbjct: 497 YSPSTVAKYLLQLSQEFNTFYAKVK-------INDSNDVVRQTNLLLVESILNILIEGLR 549

Query: 576 IIGVESPNEM 585
           ++G++    M
Sbjct: 550 LLGMKHLEAM 559


>gi|159900646|ref|YP_001546893.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893685|gb|ABX06765.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 576

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 121/620 (19%), Positives = 241/620 (38%), Gaps = 79/620 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCA-HGHLSTNAAMILSRPLGL 59
           M  FA F   +++ L +      +   ++D +    P+       L+      +++  G+
Sbjct: 1   MDTFARFEQAIRDALLDTTL---IPADLIDLVA---PKASGVQADLAL-PCFRVAKLRGI 53

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSP-SYLRKILSSIVVSGIEYGRNLI 117
           +P   A+ +   +K  P+   +  +  G ++N  L+P ++ + +L  I     EYGR+  
Sbjct: 54  NPAQFAQTLANALKFTPESLVLKASALGAYVNFSLNPVTFAQSVLHDISQRKAEYGRSTK 113

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G+   V +++ S N    M V H R  ++G  + ++    GY V R  +  D   Q+  +
Sbjct: 114 GQNQAVVVDYSSPNIAKRMRVDHIRSTMIGQAIVNIYRALGYHVIRMNHWGDYDPQLG-I 172

Query: 178 ALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           +L+    +Q    N +S L   E      +      +LA  ++S+L    E + + +++ 
Sbjct: 173 SLAAMQHFQHRNGNGESMLASLEQQTQQYHADDQVHDLAQAWASKLTK-GEPQAIKLLQQ 231

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             V   +   + + + L +  D+   E  + R     I++ +       +     L    
Sbjct: 232 L-VDLSLTANQANYRRLGVAFDVQHCESFYAREAQVVIKEAL-------HYQIAQLDGHV 283

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIY 354
           +      D   K L              L +SDGS  Y   D+A  K + E      +IY
Sbjct: 284 AVVKDLLDEQGKAL----------PTLLLNRSDGSSLYITRDIAAIKYREELYQPTKIIY 333

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV---------------RLYRDGMPIK 399
           V+      + ++   ++  +   KA ++ + C ++                +Y + +  +
Sbjct: 334 VVKQAQELHFRQAFTISKTLGYTKADLSHVACGMILGPERRSPSGARFSTMIYLEPLLDE 393

Query: 400 MSKRAGDFITLR--------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
              RA   I  +               + ++VG  +V +  L    +  +  D+ ++   
Sbjct: 394 ACTRAKALIKQKALESKIPFSSTEINEIAEQVGVGAVIYHNLQHDPAHDVVVDWERMLAF 453

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QY +ARC SI R    I  + D  +   +          +E  L+  LA  
Sbjct: 454 D-GNSSTYLQYMHARCCSILRDFGRIPQNYDGRVLTHS----------AEQALLKELARL 502

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P+VI +A     P+ ++ +LY  A  F   +           ++A    L   R QLV A
Sbjct: 503 PQVIVDAAERYAPFVVSDWLYATAKAFAVFYDSC------SVLKAETLALRAARGQLVAA 556

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  + +GL ++ + +P  M
Sbjct: 557 TAQALRNGLGLLSIAAPERM 576


>gi|322500204|emb|CBZ35281.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 692

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 125/712 (17%), Positives = 236/712 (33%), Gaps = 162/712 (22%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-------G 58
           +    LK  +K    K           +I   +         N AM L + L        
Sbjct: 9   NVELALKEIVKATIAK-AFPLVPAQEPLITLGKVSE---YQCNNAMGLVKVLSQQQQPIK 64

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  + E +   +  +  +D      KGFIN+ +   ++ +++  ++  GI   R  + 
Sbjct: 65  MSPQMVGEELKKNLVGNDIIDEFEPTPKGFINVSIRKEWVARMVKEVLKQGI---RPPVV 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G     L 
Sbjct: 122 TKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAFGMLI 181

Query: 179 LSV-------------------FWRYQQALYNNDSDLPEGYYPGV--------------- 204
           L +                   F+R  +  ++ D +  E     V               
Sbjct: 182 LYIKRNFPDYTTNPPDISDLTAFYRAAKKCFDEDQEFKEKARLEVVKLQALEEDSIQAWK 241

Query: 205 YLKHVGKELADKYS-------------------SELLNFPEEKWLPIVKDYSVQAMMKII 245
           Y+  V +E  DK                      ++L+  EE     V D +   + K  
Sbjct: 242 YICDVSREEFDKVYTRLGATIEERGESFYNPLIPKVLDLLEEAGQIEVSDGAKLIVSKEA 301

Query: 246 RD-------DLKALNIQHDIFISED--DFHRGDPSPIRDI-------------------- 276
           R        D+  L  QH   +S D   +H    + ++                      
Sbjct: 302 RKLDSLDARDMTKLASQHLALVSRDGPSYHPNLLAAMKKAGILTGTEGEESVALSKKEVK 361

Query: 277 ----------IDNLARQ-GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                     +D L  Q   +Y+  L P   +  +   + +   +    +        ++
Sbjct: 362 PWNKFDIRVDLDKLMAQLAPLYKKQLDPLFLEVFEAAGIVKGDSIL---VPRFSFPLMVV 418

Query: 326 KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG YTY   D+     ++     + +IY        + +     A  +   +      
Sbjct: 419 KSDGGYTYDTTDVTATYHRFVIEKMNRVIYCTDLGQYEHFRMCMQTAKDMGWMEHATWDH 478

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               +    DG   K+  R+G+ + L+ ++DE                            
Sbjct: 479 AGFGLVTGADGK--KIKTRSGETVKLKDLMDEAVERSLAILKEREAGERSQGHSEEEMQK 536

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               +G  ++++  L +  +    F + K+ + S  N   ++ Y YAR  SI R+A    
Sbjct: 537 LSNIIGIGAIKYFDLKQTRTGDYAFSYDKMLDMS-GNTAVFLLYQYARICSIKRKAGI-- 593

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +L     I  E+     E  L +    +  VI        P+ LA + Y+L + F
Sbjct: 594 --ADEELLEITDISLET---PQEKSLALCALRFQTVILKTVEDLFPHHLADFAYELMTNF 648

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + + R           +  L   RL LV      +   L ++ +E+   
Sbjct: 649 SNFFQNCRVL---------DDPLQNSRLCLVELTRITLKKTLELLNIETAER 691


>gi|224531535|ref|ZP_03672167.1| arginyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511000|gb|EEF81406.1| arginyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 585

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 128/616 (20%), Positives = 236/616 (38%), Gaps = 76/616 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59
           +  +   ++K  +  I   + + K I LD+I I  ++P     G +S      LS+ L L
Sbjct: 1   MIKNVKKQIKTEISTIVSNLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLQL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFI-AGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117
              TI+E I+  +K     D   I A   ++N+  S   Y+   +  +      YG +  
Sbjct: 60  SIATISEEIIKTLK-----DKYEIKAMGPYLNIKFSRKEYINNTIQMVNTQKDTYGTSKY 114

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I   
Sbjct: 115 LDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICKS 174

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW--- 229
            L+ + ++   +    +     +  G  Y+K+       E A+    +LL   E+K    
Sbjct: 175 MLA-YKKFGNDITPEKALKKGDHLIGDFYVKYNKYSQENENAENEIQDLLLKWEQKDVNT 233

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           + + K  +  A+ + I++  K  N   D    E +      + + + +     +G  Y+ 
Sbjct: 234 IELWKKLNKWAI-EGIKETYKITNTSFDKIYLESEIFEIGKNVVLEGL----EKGLCYKR 288

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348
                        +      +           + L++ +G+  Y   DL     +  E  
Sbjct: 289 EDGAICIDLPLDSNEKADTEV---------KQKVLIRPNGTSIYLTQDLGNITVRIKEFN 339

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           FD MIYV+GS+   + K L  VA  +   K Q  + L   +    DG   KM  R G+ I
Sbjct: 340 FDEMIYVVGSEQIQHFKSLFFVAEKLGISKNQKLIHLSHGMVNLIDG---KMKSREGNVI 396

Query: 409 TLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
              +++ +                         +   ++ + +L     + + F+  K  
Sbjct: 397 DADNLILDLAESTAPEITQKIEDKENAKKIALNIALGAIHYYLLKSAVHKDIVFN-KKES 455

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QY  AR  SI  +           +     I  E      E ++I  ++
Sbjct: 456 LSFTGNSGPYIQYVGARINSILEKYN------TLSIPIMEKINLELLKHEKEWEIIKIIS 509

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E    I  A     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ +
Sbjct: 510 ELEENIIKAVKDLNPSILTSYSYSLAKHFSAYYQ------EVKVIDINNTDLTAARIEFL 563

Query: 564 HAVASIINSGLNIIGV 579
            A+   I + + ++ +
Sbjct: 564 KAILQTIKNCMYLLNI 579


>gi|146090829|ref|XP_001466367.1| arginyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134070729|emb|CAM69084.1| putative arginyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 692

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 125/712 (17%), Positives = 236/712 (33%), Gaps = 162/712 (22%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-------G 58
           +    LK  +K    K           +I   +         N AM L + L        
Sbjct: 9   NVELALKEIVKATIAK-AFPLVPAQEPLITLGKVSE---YQCNNAMGLVKVLSQQQQPIK 64

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  + E +   +  +  +D      KGFIN+ +   ++ +++  ++  GI   R  + 
Sbjct: 65  MSPQMVGEELKKNLVGNDIIDEFEPTPKGFINVSIRKEWVARMVKEVLKQGI---RPPVV 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G     L 
Sbjct: 122 TKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAFGMLI 181

Query: 179 LSV-------------------FWRYQQALYNNDSDLPEGYYPGV--------------- 204
           L +                   F+R  +  ++ D +  E     V               
Sbjct: 182 LYIKRNFPDYTTNPPDISDLTDFYRAAKKCFDEDQEFKEKARLEVVKLQALEEDSIQAWK 241

Query: 205 YLKHVGKELADKYS-------------------SELLNFPEEKWLPIVKDYSVQAMMKII 245
           Y+  V +E  DK                      ++L+  EE     V D +   + K  
Sbjct: 242 YICDVSREEFDKVYTRLGATIEERGESFYNPLIPKVLDLLEEAGQIEVSDGAKLIVSKEA 301

Query: 246 RD-------DLKALNIQHDIFISED--DFHRGDPSPIRDI-------------------- 276
           R        D+  L  QH   +S D   +H    + ++                      
Sbjct: 302 RKLDSLDARDMTKLASQHLALVSRDGPSYHPNLLAAMKKAGILTGTEGEESVALSKKEVK 361

Query: 277 ----------IDNLARQ-GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                     +D L  Q   +Y+  L P   +  +   + +   +    +        ++
Sbjct: 362 PWNKFDIRVDLDKLMAQLAPLYKKQLDPLFLEVFEAAGIVKGDSIL---VPRFSFPLMVV 418

Query: 326 KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG YTY   D+     ++     + +IY        + +     A  +   +      
Sbjct: 419 KSDGGYTYDTTDVTATYHRFVIEKMNRVIYCTDLGQYEHFRMCMQTAKDMGWMEHATWDH 478

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               +    DG   K+  R+G+ + L+ ++DE                            
Sbjct: 479 AGFGLVTGADGK--KIKTRSGETVKLKDLMDEAVERSLAILKEREAGERSQGHSEEEMQK 536

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               +G  ++++  L +  +    F + K+ + S  N   ++ Y YAR  SI R+A    
Sbjct: 537 LSNIIGIGAIKYFDLKQTRTGDYAFSYDKMLDMS-GNTAVFLLYQYARICSIKRKAGI-- 593

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +L     I  E+     E  L +    +  VI        P+ LA + Y+L + F
Sbjct: 594 --ADEELLEITDISLET---PQEKSLALCALRFQTVILKTVEDLFPHHLADFAYELMTNF 648

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + + R           +  L   RL LV      +   L ++ +E+   
Sbjct: 649 SNFFQNCRVL---------DDPLQNSRLCLVELTRITLKKTLELLNIETAER 691


>gi|146298015|ref|YP_001192606.1| arginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189083534|sp|A5FND6|SYR_FLAJO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146152433|gb|ABQ03287.1| arginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 592

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 118/612 (19%), Positives = 222/612 (36%), Gaps = 97/612 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D+I  +  R    G + T     L + +  +P  +   I   +  +    + F    GF
Sbjct: 23  VDKIEFQTTRKEFEGDI-TMVIFPLLKVIKSNPAELGNKIGTYLVENVSEVARFNVVSGF 81

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+ +S SY     + I         +   +   V +E+ S N   P+H+GH R  ++G 
Sbjct: 82  LNIVISDSYYVDFFNGIKDQKQFGFLSPNPEEKAVMVEYSSPNTNKPLHLGHVRNNLLGY 141

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY--- 205
           ++A ++  SG +V +   IND G  I    L+ + ++        SDL      G Y   
Sbjct: 142 SVAEILKASGKKVYKTQIINDRGIHICKSMLA-WEKFGNGETPESSDLKGDKLVGKYYVE 200

Query: 206 -----------LKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRD----- 247
                      L   GK   +      +    ++ L   +  D  V A+ K +       
Sbjct: 201 FDKAYKTEINQLIETGKTEEEAKKQAPIIIEAQEMLKKWEAGDEQVIALWKKMNQWVYDG 260

Query: 248 ---DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                  L +  D +  E + +      ++  +D                  K   + D 
Sbjct: 261 FATTYTNLGVNFDKYYYESNTYLLGKDVVQVGLD------------------KGVFEKDP 302

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSG 362
           D   +    T  G D  + +L+SDG+  Y   D+     + +   D   M+Y +G++   
Sbjct: 303 D-GSVWIDLTDEGLDR-KIVLRSDGTAVYMTQDIGTAIQRVKDMPDVGGMVYTVGNEQDY 360

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416
           + K L  +   +    A     L   +     G   KM  R G  +    ++ +      
Sbjct: 361 HFKVLFLILKKLGFDWASSLYHLSYGMVDLPSG---KMKSREGTVVDADDLMQDMTDTAK 417

Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                                  +G  ++++ +L     + + F+  +  + +  N   +
Sbjct: 418 QIAEDLGKLDSYSADEKAKLYKTIGLGALKYYILKVDPKKRILFNPEESVDFA-GNTGPF 476

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QY YAR +SI R+A       DFD   +  I +  E +      +  +  +P VI+NA 
Sbjct: 477 IQYTYARIQSIIRKA-------DFDFSNKIEIEELHEKEKEL---VKQIELFPEVIQNAA 526

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A Y YDL   ++  +           +   +    + R+QL   VA +I S 
Sbjct: 527 QNHSPALIANYTYDLVKEYNSFYQSVH------ILGEADLTKKIFRVQLSQKVAEVIKSA 580

Query: 574 LNIIGVESPNEM 585
            +++G+E P  M
Sbjct: 581 FSLLGIEVPERM 592


>gi|19354292|gb|AAH24878.1| Arginyl-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 578

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 109/561 (19%), Positives = 201/561 (35%), Gaps = 81/561 (14%)

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-SGIEYGRNLIG-- 118
              A  +  ++K D  V ++  AG   +N  ++   L K +   V   G +YG       
Sbjct: 62  QDQARRLAEKLKCDTVVTAIS-AGPRTLNFKINRELLTKAVLQQVTEDGCKYGLKSELFS 120

Query: 119 --KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                ++ +EF S N     HVGH R  ++G+ +A+L    G++VTR  YI D G Q   
Sbjct: 121 DLPKKRIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGL 180

Query: 177 LALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPI 232
           L        Y++ L  N        Y  V  +    +   K + E    L   + + L +
Sbjct: 181 LGTGFQLFGYEEKLQTNPLQHLFDVYVQVNKEATDDKNVTKLAHEFFHRLEMGDTQALSL 240

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            + +   ++ +      K L I  D +  E  F+R      +D++  L  +G +      
Sbjct: 241 WQRFRDLSI-EEYTQIYKRLGIYFDEYSGES-FYREKS---QDVLKLLDSKGLL------ 289

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
              ++     D+            G      +++SDG+  Y   DLA    + ++  FD 
Sbjct: 290 QKTAEGNVVVDLSGTG--------GLSSVCTVMRSDGTSLYATRDLAAAIHRMDKYNFDT 341

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           MIYV       + +++  +   +    A       E  +    G+   M  R G    L 
Sbjct: 342 MIYVADKGQRRHFQQVFQMLKIMGYDWA-------ERCQHVPFGIVKGMKTRRGGVTFLE 394

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            V++E                           VG  +V              F + +V  
Sbjct: 395 DVLNEVQSRMLQNMASIKTTKQLENPQETAERVGLAAVIIQDFRGTLLSDYQFSWDRV-F 453

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           QS+ +   ++QY +AR  S+            F     N        +   + ++ HL  
Sbjct: 454 QSRGDTGVFLQYTHARLCSLEE---------TFGCGYLNDSNVACLQEPQSVSILQHLLR 504

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +  V+  ++   +P  +  YL  L+ +            +   V+ +   +   RL L  
Sbjct: 505 FDEVLYLSSQDLQPKHIVSYLLTLSHL-------AAVAHKTLKVKDSPPDVAGARLHLFK 557

Query: 565 AVASIINSGLNIIGVESPNEM 585
           AV S++ +G+ ++G+     M
Sbjct: 558 AVRSVLANGMKLLGITPVCRM 578


>gi|255933225|ref|XP_002558083.1| Pc12g12720 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582702|emb|CAP80899.1| Pc12g12720 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 646

 Score =  302 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 117/666 (17%), Positives = 222/666 (33%), Gaps = 131/666 (19%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +     +   +   L          +KI  RI      D   G LS   A +  +    +
Sbjct: 31  LNPMDIYRQHIAEEL--AKAADIDAQKIYPRIAWTSTLDK--GDLSLPVASL--QIKQKN 84

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLY-----LSPSYLRKILSSIVV------SG 109
           P+ +A+ + ++      +      G   I  +     L+ + L +IL            G
Sbjct: 85  PVELAKELASKFPASDLIHPPTPLGPH-IQFFCKPKPLTDNVLGRILKEKSAYGTNGNQG 143

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +   +      K+ IEF S N   P H GH R  ++G  LA++    G++V +  Y+ D
Sbjct: 144 QKDPFDPSKGQKKIIIEFSSPNIAKPFHAGHLRSTIIGGFLANIYTVMGWDVIKMNYLGD 203

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL-AD 215
            G Q   LA    +   +     D   P  +   VY             +K + +++ A 
Sbjct: 204 WGKQYGLLANGFKYFGNEEALVKD---PINHLFDVYVKVNRQVSEQEGPIKELKEQIKAK 260

Query: 216 KYSSELLNFPEEKWLPIVK-----------------DYSVQAMMKIIRD--------DLK 250
           K  SE +   E +   +V                  D    A+ +  RD           
Sbjct: 261 KEKSEDVAELETELAKLVDVSEDEKARRYFKSMEDGDPEALALWRKFRDLSIEKYKQTYA 320

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            LNI  D++  E          + D    + + G                  +     ++
Sbjct: 321 RLNIDFDVYSGESQI---KSESMTDAYKLMEQAG----------------VSEKSEGAVI 361

Query: 311 FRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRL 367
              T  G        +++ DG+  Y   D+     +  E  FD MIYV+ +    ++ +L
Sbjct: 362 VDFTKHGAKKLGKAIIVRKDGTPLYLTRDIGAITERDNEYHFDKMIYVVAAQQDLHLAQL 421

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS------ 421
             V   +  K       L    +    GM   MS R G    L  ++ +VG         
Sbjct: 422 FKVTELMGHKD------LASRCQHINFGMVRGMSTRKGTVKFLDDILRDVGDKMHEVMKK 475

Query: 422 --VRFM--------------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
             V++                      +  K     DF+   +    + +   Y+QYA+A
Sbjct: 476 NEVKYSQVEDPEKTADILGITSVMVQDMTGKRVNGYDFNLDAMTSF-EGDTGPYLQYAHA 534

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  S+ R+++        D+        +   +   + L+  LA++P V+       EP 
Sbjct: 535 RLCSMARKSE-------LDVNELVNANFDLLTEQHAVDLVRLLAQWPDVLLQTAKTLEPI 587

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YL+ +  +    +   +       V  +   +   R+ L  +   ++++G+ ++G+
Sbjct: 588 TVLSYLFKMTHMLSSSYDVLK-------VIGSEPDVKQARMALYASARQVLHNGMRVLGL 640

Query: 580 ESPNEM 585
                M
Sbjct: 641 SPVERM 646


>gi|67540396|ref|XP_663972.1| hypothetical protein AN6368.2 [Aspergillus nidulans FGSC A4]
 gi|40739562|gb|EAA58752.1| hypothetical protein AN6368.2 [Aspergillus nidulans FGSC A4]
 gi|259479413|tpe|CBF69611.1| TPA: arginyl-tRNA synthetase (AFU_orthologue; AFUA_2G14030)
           [Aspergillus nidulans FGSC A4]
          Length = 650

 Score =  302 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 109/654 (16%), Positives = 228/654 (34%), Gaps = 116/654 (17%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +   +  +L  I       +KI  R+      D   G L      +  +  G  P  +++
Sbjct: 38  YREHISEHLSAIT--GIEAEKIYPRLQFTSTLDK--GDLLLPVPSL--QIKGKSPADLSK 91

Query: 67  LIVARIKIDPDVDSVFIAGKG--FINLYLSPSYLRKILSSIV-----------VSGIEYG 113
            +  +      +      G G   +  +     L + +   +             G+   
Sbjct: 92  ELAEKFPESDLIHPPIAGGPGGTHLQFFFKEKPLAQRVIGQIFKEKAAYGSNGNQGLRDP 151

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           ++      K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q
Sbjct: 152 KDPSKGRKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQ 211

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL-ADKYSS 219
              LA        +     D   P  +   VY             +K + +++ A K  +
Sbjct: 212 YGLLANGYKKFGDEQKLLQD---PINHLFEVYVKINNIVSEQEGPIKELKEQIKAKKEKN 268

Query: 220 ELLNFPEEK---------------WLPIVKDYSVQAM----------MKIIRDDLKALNI 254
           E ++  E++               +   ++D    A+          +K  R+    LNI
Sbjct: 269 EDVSKLEQELAKLVDVSEDENARRYFKSMEDGDPDALSLWRRFRDLSIKKYRETYARLNI 328

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
            +D++  E    +          +++++   + +       S      D  +      + 
Sbjct: 329 DYDVYSGESQIKQ----------ESMSKANEILQSTGVSENSDGATIVDFPKHG----AK 374

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAA 373
            +G      +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +   
Sbjct: 375 KLGKA---VIVRKDGTPLYLTRDIGAIFERDEAYHFDKMIYVVAAQQDLHLAQLFKIVEL 431

Query: 374 VSEK-------KAQINVL------------LCELVRLYRDGMPIKMSKRAGDFITLR--- 411
           +  K            ++            L +++R   D M   M K    +  +    
Sbjct: 432 MGFKDLASRCQHINFGMVRGMSTRKGTVKFLDDILRDVADKMHETMKKNEEKYAQIENPV 491

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              D +G  SV    +  +     DF+   +    + +   Y+QYA++R  SI R+A+  
Sbjct: 492 ETADILGITSVMVQDMSGRRINGYDFNLDAMTSF-EGDTGPYLQYAHSRLCSILRKAEAN 550

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +L            +   ++  + L+  L+ +  ++       EP  +  YL+ L  +
Sbjct: 551 VEEL-------PSANLDLLTESHAVNLVRLLSSWHDILMMTNKTLEPTTILTYLFRLTHM 603

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +        +  V  +  +L   RL L  A   ++++G+ I+G+   + M
Sbjct: 604 ISSSYD-------VLQVIGSEPELKKARLALYEAARQVLHNGMRILGLSPVSRM 650


>gi|41055429|ref|NP_956911.1| probable arginyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|34784878|gb|AAH56803.1| Arginyl-tRNA synthetase 2, mitochondrial (putative) [Danio rerio]
          Length = 597

 Score =  302 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 123/576 (21%), Positives = 218/576 (37%), Gaps = 104/576 (18%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----GIEYGRNLIGKGTK 122
           +  +I+ D  V+ + I G+G I+  L+   L + L   + S     G++       +  +
Sbjct: 68  LARQIRTDAVVEEI-IPGRGVIHFRLNKLLLAQKLLDQLRSDPDGFGVKSEILRQLRVGR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +EF S N     H GH R  ++G+ +A+L    G EV R  Y+ D G Q   L  S F
Sbjct: 127 TLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALGNEVIRVNYLGDWGMQFGLLG-SGF 185

Query: 183 WRY---QQALYNNDSDLPEGYYPG---------------VYLK-------HVGKELADKY 217
            R+   ++        L E    G               VY++             A  +
Sbjct: 186 ERFGSQEKLRTQPLEHLFESSVGGCCVYLYGSAVCVRPQVYVQVNREAESDASVRSAAAH 245

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
               L   EE+ L + + +    + +  +   + L ++ D +  E  FHR +   +   +
Sbjct: 246 FFRRLEQSEEQALELWRHFREITIHEY-KRIYQRLGVEFDHYSGES-FHRAETQTV---L 300

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           D L  +  +            + K DM                   L++SDG+  Y   D
Sbjct: 301 DELRSRCLLKTSQKGTGVVDLSDKGDMSNYAT--------------LVRSDGTSLYITRD 346

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +A    + +R  FD MIYV     + + ++L  +  A+  + A     +         G+
Sbjct: 347 VAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRILQAMGHQWAGSCHHVAF-------GL 399

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-------------------- 436
              MS R G+ + L  V++E  S  +  M   R + EL D                    
Sbjct: 400 VQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRTSKELEDPELTAERIGISALIVQDFKG 459

Query: 437 -------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                  F++ KV  Q++ +   ++QY +AR  S+ RQ        DF            
Sbjct: 460 PLISDYRFEWDKVL-QAQGDTGVFLQYTHARLCSLLRQQDCEISCSDFSPLT-------- 510

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             D+  + L+ HL  Y  V+       +P  L  +L  L+ +        RE P    V+
Sbjct: 511 --DSRSVSLLQHLLRYDEVLLQCATDLQPKHLVNFLMTLSHLVAS---AHRELP----VK 561

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++  +   RL L  +V S++ +G+ I+G+   ++M
Sbjct: 562 GSSEAVAQARLCLFSSVHSVLANGMRILGITPVDKM 597


>gi|73544389|ref|XP_848089.1| arginyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|321438443|emb|CBZ12199.1| putative arginyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 692

 Score =  302 bits (775), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 127/712 (17%), Positives = 236/712 (33%), Gaps = 162/712 (22%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-------G 58
           +    LK  +K    K           +I   +         N AM L + L        
Sbjct: 9   NVELALKEIVKATIAK-TFPLVPTQEPLITVGKVSE---YQCNNAMGLVKVLSQQQQPIK 64

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  + E +   +  +  +D      KGFIN+ +   +L +++  ++  GI   R  + 
Sbjct: 65  MSPQMVGEELKKNLVDNDIIDEFEPTSKGFINVSIRKEWLARMVKEVLKQGI---RPPVV 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G     L 
Sbjct: 122 KKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAFGMLV 181

Query: 179 LSV-------------------FWRYQQALYNNDSDLPEGYYPGV--------------- 204
           L +                   F+R  +  ++ D +  E     V               
Sbjct: 182 LYIKRNFPDYTTNPPDISDLTAFYRAAKKCFDEDQEFKEKARLEVVKLQALEEDSIQAWK 241

Query: 205 YLKHVGKELADKYS-------------------SELLNFPEEKWLPIVKDYSVQAMMKII 245
           Y+  V +E   K                      ++L   EE     V D +   + K  
Sbjct: 242 YICDVSREEFSKVYTRLGATIEERGESFYNPLIPKVLGLLEEAGQIEVSDGAKLIVSKEE 301

Query: 246 RD-------DLKALNIQHDIFISED--DFHRGDPSPIRDI-------------------- 276
           R        D+  L  QH   +S D   +H    + ++                      
Sbjct: 302 RKLCSLDARDMTKLASQHLALVSRDGPSYHPNLIAAMKKAGILTGAEGEESVALSKKEVK 361

Query: 277 ----------IDNLARQ-GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                     +D L  Q   +Y+  L P   +  +   + +   +    +        ++
Sbjct: 362 PWKKFDIRVDLDKLMAQLAPLYKKQLDPLFLEVFEAAGIVKGDSIL---VPRFSFPLMVV 418

Query: 326 KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDG YTY   D+     ++     + +IY        + +     A  +   +      
Sbjct: 419 KSDGGYTYDTTDVTATYHRFVIEKMNRVIYCTDLGQYEHFRMCLQTAKDMGWMEHATWDH 478

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
               +    DG   K+  R+G+ + L+ ++DE                            
Sbjct: 479 AGFGLVTGADGK--KIKTRSGETVKLKDLMDEAVERSLAILKEREAGERSQGHSEEVMQK 536

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               +G  ++++  L +  +    F + K+ + S  N   ++ Y YAR  SI R+A    
Sbjct: 537 LSNIIGIGAIKYFDLKQTRTGDYAFSYDKMLDMS-GNTAVFLLYQYARICSIQRKAGI-- 593

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +LF    I  E+     E  L +    +  VI        P+ LA + Y+L + F
Sbjct: 594 --ADEELFKITDISLET---PQEKSLALCALRFQTVILKTVEDLFPHHLADFAYELMTNF 648

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + + R           +  L   RL LV      +   L ++ +E+   
Sbjct: 649 SNFFQNCRVL---------DDPLQNSRLCLVELTRITLKKTLELLNIETAER 691


>gi|302498732|ref|XP_003011363.1| hypothetical protein ARB_02422 [Arthroderma benhamiae CBS 112371]
 gi|291174913|gb|EFE30723.1| hypothetical protein ARB_02422 [Arthroderma benhamiae CBS 112371]
          Length = 655

 Score =  302 bits (774), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 130/621 (20%), Positives = 221/621 (35%), Gaps = 115/621 (18%)

Query: 38  RDCAHGHLS-TNAA-----MILS---RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88
           +D A+G +   NAA     M+++   +  G++P  +AE IV++      +     A   F
Sbjct: 54  KDTAYGAVQWANAATNADLMLITARLKLKGINPKQLAEDIVSKFPSTSLLRQP-TANGIF 112

Query: 89  INLYLSPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           I L   P  L           R    S  + G+    +      KV IEF S N     H
Sbjct: 113 IPLSFCPDTLPKLILPFIFDRRASYGSNSLQGLRNPHDQSAGKKKVIIEFSSPNIAKEFH 172

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
            GH R  ++G  +++L    G++V +  Y+ D G Q   LA+       + L+  +   P
Sbjct: 173 AGHLRSTIIGAYISNLYESMGWDVVKVNYLGDWGKQFGLLAVGWQRFGSEELFTKE---P 229

Query: 198 EGYYPGVYLKHVGKELADKYSSELLN--------------FPEE-KWLPIVKDYSVQ--A 240
             +   VY K       +K +SE                 F E   +   ++D      A
Sbjct: 230 LKHLLEVYAKINSLFAPEKEASEQARDRGEDTSEIESKGLFAERNAFFQKMEDGDPDAIA 289

Query: 241 MMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + K  RD            LNI+ D++  E        S +      L  +G        
Sbjct: 290 LWKRFRDVSIERYISTYARLNIKFDVYSGESTV---KVSTVEKAEALLKEKG-------V 339

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
             +   T   D  +      +  +G  V R  +   G+ TY   D+A    + E+  FD 
Sbjct: 340 YTEDNGTWIIDFKKHG----APHLGVAVARTRI---GTTTYLLRDIAAALERVEKYQFDK 392

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           MIYV+ ++   Y +RL      +        +           G  + MS R G    L 
Sbjct: 393 MIYVVSTEQDLYFQRLFKTIELMGYTDVAAKLEHINF------GKVMGMSSRLGTVKILS 446

Query: 412 HVVDE----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
            ++DE                            +G  +V    +  K      FD  K+ 
Sbjct: 447 DILDECGSAMHDVMRKNPAKYEQIENPAEVADTLGITAVMVQDMAGKRIHNYPFDIAKMT 506

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + +   Y+QYA+AR  SI R+       +D D             +   + ++  +A
Sbjct: 507 SF-EGDTGPYLQYAHARLCSIVRK-------VDIDSKEITTANFSLLKEPHAINILRLMA 558

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +YP V  NA    EP  +  YL+ LA      +        ++ + A + ++T+ RL L 
Sbjct: 559 QYPDVTCNALKTLEPTTILTYLFRLAHQVSSGYD------VIKVIGAESHEVTVARLALY 612

Query: 564 HAVASIINSGLNIIGVESPNE 584
                ++ +G+ ++G      
Sbjct: 613 EGARQVLENGMRLLGFSPVKR 633


>gi|322492952|emb|CBZ28234.1| putative arginyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 692

 Score =  302 bits (774), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 134/709 (18%), Positives = 242/709 (34%), Gaps = 156/709 (22%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-------G 58
           +    LK  +K    K           +I   +         N AM L + L        
Sbjct: 9   NVELALKEIVKATIAK-AFPLVPAQEPLITLGKVSE---YQCNNAMGLVKVLSQQQQPIK 64

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           + P  + E +   +  +  +D      KGFIN+ +   ++  ++  ++  GI   R  + 
Sbjct: 65  MSPQMVGEELKKNLVDNDIIDVFEPTSKGFINVSIRKEWVTSMVKEVLKQGI---RPPVV 121

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +V ++F + N    MHVGH R  ++G++++ L+ F  ++V R  +I D G     L 
Sbjct: 122 KKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAFGMLI 181

Query: 179 LSV-------------------FWRYQQALYNNDSDLPEGYYPGV--------------- 204
           L +                   F+R  +  ++ D +  E     V               
Sbjct: 182 LYIKRNFPDYTTNPPDISDLTAFYRAAKKCFDEDQEFKEKARLEVVKLQALEEDSIQAWK 241

Query: 205 YLKHVGKELADKYS-------------------SELLNFPEEKWLPIVKDYSVQAMMKII 245
           Y+  V +E  +K                     S++L   EE     V D +   + K  
Sbjct: 242 YICDVSREEFNKVYTRLGATIEERGESFYNPLISKVLGLLEEAGQIEVSDGAKLIVSKEE 301

Query: 246 R--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV----------YEGILPP 293
           R  D L A ++            RG PS   ++I  + + G +                 
Sbjct: 302 RKLDSLDARDMTKLASQHLALVSRGGPSYHPNLIAAMKKAGILTGADGEESVALSKKEVK 361

Query: 294 PKSKTTQKCDMDR----------KQL------LFRSTMV--GDDV-------DRPLLKSD 328
           P SK   + D+D+          KQL      +F +  +  GD +          ++KSD
Sbjct: 362 PWSKFDIRVDLDKLMAQLAPLYKKQLDPLFLEVFEAAGIVKGDSIFVPRFSFPLMVVKSD 421

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G YTY   D+     ++     + +IY        + +     A  +   +         
Sbjct: 422 GGYTYDTTDVTATYHRFVIEKMNRVIYCTDLGQYEHFRMCLQTAKDMGWMEHATWDHAGF 481

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
            +    DG   K+  R+G+ + L+ ++DE                               
Sbjct: 482 GLVTGADGK--KIKTRSGETVKLKDLMDEAVERSLAILKEREAGERSQGHSEEEMQKLSN 539

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  ++++  L +  +    F + K+ + S  N   ++ Y YAR  SI R+A       
Sbjct: 540 IIGIGAIKYFDLKQTRTGDYAFSYDKMLDMS-GNTAVFLLYQYARICSIKRKAGM----A 594

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D  LF    I  E+     E  L +    +  VI        P+ LA + Y+L + F   
Sbjct: 595 DEALFKITDISLET---PQEKSLALCALRFQAVILKTAEDLFPHHLADFAYELMTNFSNF 651

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + + R           +  L   RL LV      +   L ++ +E+   
Sbjct: 652 FQNCRVL---------DDPLQNSRLCLVELTRITLKKTLELLNIETAER 691


>gi|295698518|ref|YP_003603173.1| arginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157341|gb|ADD79786.1| arginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 584

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 101/622 (16%), Positives = 228/622 (36%), Gaps = 75/622 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +  +   +++N +      +   K I  R           G+   +    + R   + 
Sbjct: 1   MNIKREIQEKIQNTIN--FHSLSNGKDIQVRF---SNHSNKFGNYQVDGLSNMLRSNRIS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIG 118
                + ++  +        + I    FIN++L   ++ + +  ++              
Sbjct: 56  LKEFGKKLLLELSKQEYFKKIEIIEPNFINVFLEEKWINQQIDCMLSEKYLSTIRSENTE 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K     I++ S N    MHVGH R  ++GD++  +  F G ++ +  +I D G     L 
Sbjct: 116 KNMVTIIDYSSPNIAKNMHVGHLRSTIIGDSIVRISKFLGKKIIKVNHIGDWGTHFGMLI 175

Query: 179 LSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSS--ELLNFPEEKWLPIVK 234
             +    ++    N     L E Y     +    KE +       + L     + L + K
Sbjct: 176 AYLKEILRKNSTQNITLEKLEEFYQESRKIFDQDKEFSKISRRYIQKLQSGNSELLELWK 235

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +     + +  R   K L +      I  + F++   S + +I+++L  +          
Sbjct: 236 NLVHITISENQRI-YKLLGVSLKKKDIVAESFYK---SMLEEIVEDLKHR-------KIA 284

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
              K      ++  +        G      + KSDG Y Y   ++A  K + ++   D +
Sbjct: 285 VVDKGAVVVYLEEFK-----NKYGKPSAVMIQKSDGGYLYTTTEIACLKYRCQKLKADRI 339

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLR 411
           +Y + S    ++++   +A      +  + +   ++   L +D  P +   R+G  + L 
Sbjct: 340 LYYVDSRQKRHLQQSWIIAKKAGYVEENVKLEHHQIGMILGKDKKPFR--TRSGKNVKLF 397

Query: 412 HVVD----------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            +++                            ++G  SV++  L +       F++  + 
Sbjct: 398 EILEKSIIKAKQFISEKGLKNSRKRNILKIARKIGIGSVKYSDLSKNRKTDYIFNWSTI- 456

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QY Y+R  S+ +++K    ++  + F           ++ E  + +HL 
Sbjct: 457 FSFIGNTASYIQYTYSRANSLIKKSKMNLNEIKDETFIA--------TNSYEKIISMHLL 508

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
            +  +++  +    P  L  YLY L++ F   + +         +   ++     RL+LV
Sbjct: 509 RFVEILQETSQKGLPNILCNYLYRLSNEFSKFYENC------SIINVQDKTRKKNRLKLV 562

Query: 564 HAVASIINSGLNIIGVESPNEM 585
           +     I  GLN++G+++ ++M
Sbjct: 563 YLTKITIKIGLNLLGIQTISKM 584


>gi|146322998|ref|XP_755736.2| arginyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129558565|gb|EAL93698.2| arginyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 646

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 109/663 (16%), Positives = 217/663 (32%), Gaps = 138/663 (20%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +   +   L          +K+  ++      D   G L      +    +  +P  + +
Sbjct: 38  YRVHIAEKLGA--AAGIEPEKLYPKLQWTNTLDK--GDLVLPVPSL---QIKKNPQELCK 90

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLY----LSPSYLRKILSSIVV------SGIEYGRNL 116
            +  +      V      G      +    L+ + + +IL            G+    + 
Sbjct: 91  ELAEKFPESDLVAPPVPFGVHLQFFFKPEPLTKTVISRILKEKAAFGTNGNQGLRDPSDP 150

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   
Sbjct: 151 SKGKKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGL 210

Query: 177 LALSVFWRYQQALYNNDSDL---PEGYYPGVY-------------LKHVGKELADKYSS- 219
           LA           + N+ +L   P  +   VY             +K + +++  K    
Sbjct: 211 LANGF------KRFGNEEELLKNPINHLFDVYVKINQIVAQQEGPIKELKEQIKAKKEKN 264

Query: 220 --------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                                     + +   +E+ L + + +   ++ K  +     LN
Sbjct: 265 EDVSVLEAELAKLVDVSEDEKARRYFKSMEDGDEEALALWRRFRDLSIEKY-KQTYARLN 323

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I  D++  E        +   + ++                    T   +     ++   
Sbjct: 324 IDFDVYSGESQIKNESMTAAYETMEK-------------------TGVSEKSEGAVIVDF 364

Query: 314 TMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV 370
           T  G        +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +
Sbjct: 365 TKHGAKKLGKAIIVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKI 424

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------- 417
              +  K       L    +    GM   MS R G    L  ++ +V             
Sbjct: 425 TELMGRKD------LASRCQHINFGMVRGMSTRKGTVKFLDDILRDVADKMHEVMKGNAE 478

Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                          G  SV    +  K     DF+   +    + +   Y+QYA+AR  
Sbjct: 479 KYAQVENPEETADILGLTSVMVQDMTGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLC 537

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R++     +LD           +   +   + L+  LA +P V+ N T   EP  + 
Sbjct: 538 SIVRKSGLNVEELDSANL-------DLLTEPHAVDLVRLLATWPDVLLNTTKTLEPTTIL 590

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ +  +    +   +       V  +  +L   R+ L  A   ++++G+ ++G+   
Sbjct: 591 TYLFRMTHILSSSYDVLK-------VVGSEPELKKARMALYEAARQVLHNGMRVLGLSPV 643

Query: 583 NEM 585
             M
Sbjct: 644 ERM 646


>gi|119719478|ref|YP_919973.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524598|gb|ABL77970.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 635

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 146/662 (22%), Positives = 250/662 (37%), Gaps = 113/662 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-LDP 61
           L  +   ++  +L  +     VE   ++     R      G L+      +S+ +  L  
Sbjct: 8   LVDNVKRQVAEFL--VSKGFAVEPAQVEV----RKAPKTFGDLAVPL-FTISKVVKGLSV 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKG 120
             ++ L     K    V S  +    F+NL +      +++ S VV  G  YG       
Sbjct: 61  EEVSTLFGG-FKPSGLVKSSKVENN-FLNLVVDEKRYAEVVYSSVVRLGDNYGFVPAETR 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ------- 173
            ++ +E VSANP  P+HVGH R  V+GD+L  L+   G+EV   +Y++D G Q       
Sbjct: 119 ERIIVEHVSANPIHPLHVGHLRNGVLGDSLVRLLRARGHEVKAHFYVDDVGLQVAYAAKA 178

Query: 174 ----------------------INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                                 IN L      R +    + D           YL  +G 
Sbjct: 179 FSIVGGEGQGKKDHFVGTLYTAINLLIEVKKLREKAKSASGDELAEINSKVSEYLWRLG- 237

Query: 212 ELADKY---------SSELLNFPEEKWLPIVKDYS-------------VQAMMKIIRDDL 249
           EL++K+           E    PE +   + + Y              +   ++ IR+ L
Sbjct: 238 ELSEKFPGLIEKLLEWVEKTEDPEAELRRLNRMYEEGDPSTVKLTRRVLDYCLEGIRETL 297

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRK 307
             L I  D +  E +          D+ID L   G V   +G L        +  D+ R 
Sbjct: 298 DRLGISFDSWDWESEL-TVWSGATSDVIDKLRGLGLVERRDGALVFRADLLAESEDVRRA 356

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
             +     V       L++SDG+  Y   D+AY   K  R  D +I V+    +    +L
Sbjct: 357 AGIPPGFTV---TPMTLVRSDGTTLYTTRDIAYSIWKLSR-ADRVINVIAVQQTLAQAQL 412

Query: 368 EAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
                A+  +    ++     E+V L       +MS R G +++   V++E         
Sbjct: 413 RLALYALGYRDVGRRLIHYSYEMVNLP----GTRMSSRRGVYVSADEVIEEAVARAKEEI 468

Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                        VG  +++F  L +   ++L FD+ +V +  ++N   +VQY+Y R   
Sbjct: 469 AKRGVGDVGDAEKVGIGALKFFFLSQTPGKVLTFDWKRVLDF-EQNSGPFVQYSYVRALG 527

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+A +     D             +    E  LI+ + E+P V++ A     P  LA 
Sbjct: 528 ILRKASEEHIRPDE--------LNVGDVGEEEHPLILLVGEFPNVVKEAADNLRPDLLAS 579

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL  LA+ F+ ++           ++A        RL +V  V   + +G+ ++G+E+P 
Sbjct: 580 YLNTLATEFNRYYDS------YPVLRAPTTSKKYSRLAVVKMVEQTLKNGMKLLGIEAPQ 633

Query: 584 EM 585
            M
Sbjct: 634 RM 635


>gi|327349062|gb|EGE77919.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 710

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 114/660 (17%), Positives = 224/660 (33%), Gaps = 137/660 (20%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           + ++ E+  +      +     I+       G L    A+   +  G  P  +   +V  
Sbjct: 102 RAHIAELVAQALGIDSLFVYPKIQWTNSLEKGDL--VLAVPALQIKGRKPAEVTAQLVEN 159

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGKG 120
           +     + +  ++G   +  Y  P  L K + S +             G+    +     
Sbjct: 160 LPPSDLIGTPVVSGTH-VQFYFKPEPLTKTVISSIQKNRATYGTNANVGLRDPADPSKGK 218

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA  
Sbjct: 219 KKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLHTVMGWDVVKMNYLGDWGKQYGLLANG 278

Query: 181 VFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSS------------------ 219
                    Y N+ +L   P  +   VY+K + K++A++                     
Sbjct: 279 Y------EKYGNEEELVKDPINHLFDVYVK-INKDVAEQEGPIKELKEQIKQKKEKNEDT 331

Query: 220 -----------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                  + +   +E  L + + +   ++ K  ++    LNI  
Sbjct: 332 AELEKDLQAKVDVSYDEKARRYFKSMEDGDESALALWRRFRDLSIEKY-KETYARLNIDF 390

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +  E       P  +    +++++ G                  +     ++      
Sbjct: 391 DRYSGESQI---KPESLAKAYESMSKTG----------------VSEDSEGAVIVDFAKH 431

Query: 317 GDDV--DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           G        +++ DG+  Y   D+A    +  E  FD M+YV+ +    ++ +L  V   
Sbjct: 432 GAKKLGKAIVVRKDGTPLYLTRDIAAIVERDEEYHFDKMLYVVAAQQDLHLAQLFKVTEL 491

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM-------- 425
           V  K       L +  +    GM   MS R G    L  ++ +VG      M        
Sbjct: 492 VGRKD------LADRCQHVNFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMKKNTSKYE 545

Query: 426 --------------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                                +  K     +F+   +    + +   Y+QYA+AR  S+ 
Sbjct: 546 QVENPEQTADILGITSVMVQDMSGKRINGYEFNLDDMTSF-EGDTGPYLQYAHARLCSMT 604

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A+        D    +        ++  + LI  LA +P V+ N T   EP  +  YL
Sbjct: 605 RKAE-------IDPSELSSADLSLLTESHAIDLIRLLASWPDVVFNTTKTLEPTTILTYL 657

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +  V    +   +       V  +  +L   R+ +      ++++G+ ++G+     M
Sbjct: 658 FRMTHVLSSGYDVLK-------VVGSEPELKKARMAMYDCARQVLHNGMRLLGLNPVERM 710


>gi|225563328|gb|EEH11607.1| arginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1042

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 116/634 (18%), Positives = 211/634 (33%), Gaps = 131/634 (20%)

Query: 34   IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
            I+       G L    A+   +  G  P  +   IV  +     + +  ++G   I  Y 
Sbjct: 457  IQWTNSLDKGDL--VLAVPALQIKGKKPAEVTAQIVENLPPSDLIGTPVVSGTH-IQFYF 513

Query: 94   SPSYLRKILSSIVVS-----------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
             P  L K + S ++            G+    +      K+ +EF S N   P H GH R
Sbjct: 514  KPEPLTKTVISSILKNRATYGTNANVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLR 573

Query: 143  CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEG 199
              ++G  LA+L    G++V +  Y+ D G Q   LA           Y N+ +L   P  
Sbjct: 574  STIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANGY------EKYGNEEELIKDPIN 627

Query: 200  YYPGVYLK--------------------------HVGKELADKYSSEL------------ 221
            +   VY+K                              EL  +  +++            
Sbjct: 628  HLFDVYVKINKDVAEQEVPIKELKEQIKQKKENSEDTTELEKELQAKVDVSYDEKARRYF 687

Query: 222  --LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +   +E  L + + +   ++ K  ++    LNI  D +  E       P  +    + 
Sbjct: 688  KSMEDGDEGALVLWRRFRDLSIEKY-KETYARLNIDFDRYSGESQV---KPESLAKAYEA 743

Query: 280  LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +A+ G   E                  K +              +++ DG+  Y   D+A
Sbjct: 744  MAKTGVSEESEGAVIVDFAKHGAKKLGKAI--------------VVRKDGTPLYLTRDIA 789

Query: 340  YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                +  E  FD M+YV+ +    ++ +L  V   V  K       L    +    GM  
Sbjct: 790  AIVERDEEFHFDKMLYVVAAQQDLHLAQLFKVTELVGRKD------LANRCQHVNFGMVR 843

Query: 399  KMSKRAGDFITLRHVVDEVGSDSVRFM----------------------------MLWRK 430
             MS R G    L  ++ +VG      M                             +  K
Sbjct: 844  GMSTRKGTVKFLNDILKDVGEKMHEVMKKNTAKYEQVANPEQTADILGITSVMVQDMSGK 903

Query: 431  NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                 +F+   +    + +   Y+QYA+AR  S+ R+A+        D    +       
Sbjct: 904  RINGYEFNLDDMTSF-EGDTGPYLQYAHARLCSMTRKAE-------IDPSELSSANLSLL 955

Query: 491  FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
             +   + LI  LA +P V+ N T   EP  +  YL+ +  V    +   +       V  
Sbjct: 956  TEPHAIDLIRLLASWPDVVFNTTKTLEPTTVLTYLFRMTHVLSSGYDVLK-------VVG 1008

Query: 551  NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +  +L   R+ +      ++++G+ ++G+     
Sbjct: 1009 SEPELKKARMAMYDCARQVLHNGMRLLGLNPVER 1042


>gi|325989821|ref|YP_004249520.1| Arginyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574906|emb|CBZ40566.1| Arginyl-tRNA synthetase [Mycoplasma suis]
          Length = 556

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 136/589 (23%), Positives = 252/589 (42%), Gaps = 47/589 (7%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  +  ++LK  L+++  + K    +LD++ +E  ++   G  STN   ++S        
Sbjct: 1   MILELKNQLKASLRKVL-ENKGFSLLLDKVELEETKNSKFGFFSTNLPFLISSAYKKSIE 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKG 120
              +++++    +  +  V  A +G++N ++SP  +     S +     I    N   K 
Sbjct: 60  ESEQILISSFPKNELIQKVE-AVQGYLNFFISPDLIENFFRSSLKRRKIISRANNEENKK 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +E VSANPTG +H+GH R  V+ DT+++L+ ++   V R Y INDAG QI  L  S
Sbjct: 119 DKYFVEIVSANPTGILHIGHIRNGVITDTISNLLEYNNNSVFRTYLINDAGTQIEELLRS 178

Query: 181 VFWRY----QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           +   Y    +  +  + ++     Y G  +K   + ++ K+        +++    +K +
Sbjct: 179 IHNFYSFTSRGGVGISLTEESNVKYTGSEIKECAEAISQKFGYNW-ELTDKELTHQIKLF 237

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V+  +  I+ +LK+L+IQ D +  E                         E  L     
Sbjct: 238 AVEFFLDKIKKELKSLSIQVDSWDYESRI--------------------CSESALTNLIK 277

Query: 297 KTTQKCDMDRKQLLFRSTMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNM 352
           K      +    L F+++    G + D  L+KSDG  +YF  DL Y   K E       +
Sbjct: 278 KLEDFIYLKDNALWFKTSAFLEGYEKDDVLVKSDGKISYFGQDLIYHLHKLEFLGKTGTI 337

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +  +  DH G++ R++A   ++   +  +   +  L RL  +G  I  SKR   F++   
Sbjct: 338 VNTLAEDHKGHIDRMKAFFYSIGVPQDSVKYKITRLSRLIMEGKKIVFSKRENIFLSAEE 397

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + + +  D +R+ +  R     LD D  K+K +   N +FY+ YAY+R   I  +     
Sbjct: 398 LKEHLSVDEIRWFLCSRDEENELDIDLSKLKNKDYNNQIFYILYAYSRALKITER----- 452

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             + FDL   + +  E      E  LI  +       + A    + + ++ YL+ LA  F
Sbjct: 453 --IYFDL-SESKLSFEKLDSEVEQSLINSVLSVELKFQKAIQTLKVHIMSDYLFSLAKKF 509

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           H  +        +  +   N +  + R  LV  V  I +  L +  +  
Sbjct: 510 HSFYES------VSVINEPNTETQITRFALVKLVLRIFSELLPLFRITP 552


>gi|47224362|emb|CAG09208.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 600

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 128/639 (20%), Positives = 234/639 (36%), Gaps = 93/639 (14%)

Query: 1   MYLFADFSSRLKNYL-KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---P 56
           M  F  F  R+   L   +          L  + + R +  A      +  ++ +R   P
Sbjct: 1   MAFF--FRQRIAEKLCSRLQQSEDAITPALSAVPVFRKQQSA--DFKLSIGLLRARGVLP 56

Query: 57  LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
              D     E + +++K D  V+ V  AG G IN  +    L + +      G +    L
Sbjct: 57  SSGDIQQQTEHLASQLKPDRVVEDVS-AGSGVINFKVHRKLLVQKMLEPFGKGQDEMFGL 115

Query: 117 IG------KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
                         +E+ S N     H GH R  V+G+ +A+L    G +V R  Y+ D 
Sbjct: 116 NSDLFSSLNRGTTLVEYSSPNIAKKFHAGHLRSTVIGNFIANLKQSLGNKVIRMNYLGDW 175

Query: 171 GAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHV-------GKELADKYSSELL 222
           G Q   L      +  Q+ L  N    P  +   VY+K         G   A +     L
Sbjct: 176 GMQFGLLGAGFGQFGCQEELKQN----PLQHLFEVYVKANQEAESSGGLAQAAREFFRRL 231

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              E++ L + + +    + +  R   + L +  D++  E     G    +++++  L  
Sbjct: 232 EQREQEALALWQQFREITVTEYQRV-YERLGVHFDVYSGESSHQDG----VQEVLQQLEG 286

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY--------F 334
           +G +            +   DM     + RS      + R +L  +   ++         
Sbjct: 287 RGLLKTSERGTGVVDLSPDGDMSSVCTVLRSDGTSLYITRSVL-PEAQPSHPPEELTSPR 345

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           + DLA    + ER  FD MIYV     S + ++L  +   +    A          R   
Sbjct: 346 SRDLAAAIDRMERYSFDEMIYVTDKSQSNHFRQLFQLLPTLGHSWADRC-------RHVP 398

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS--------------------- 432
            G+   M  R+GD + L  V+DE  +  +R M   +                        
Sbjct: 399 FGLVRGMKTRSGDVVFLEDVLDEARARMLRNMEQSKTTKQMENPEETAEKVGIAALIIQD 458

Query: 433 ------ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                     FD+ +V  Q++ +   ++QY +AR  S+ R++       DF+        
Sbjct: 459 FKGPLLSDYTFDWDRVL-QAQGDTGVFLQYTHARLCSLVRRSG-AAEVRDFE-------- 508

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                D + + ++ HL  Y  ++  +    +P  L  +L  L+ +        RE P   
Sbjct: 509 PSLLLDPTGVAVLQHLLRYDELLYQSAQDLQPKHLVGFLLKLSHLIAS---AHRELP--- 562

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V+ +++++   RL+L  A  S++ SG++I+G+     M
Sbjct: 563 -VKGSSQEVAQARLRLFGAARSVLASGMSILGIAPVERM 600


>gi|115384424|ref|XP_001208759.1| arginyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114196451|gb|EAU38151.1| arginyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 666

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 111/658 (16%), Positives = 220/658 (33%), Gaps = 130/658 (19%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIA 65
           +   + + L EI        KI DR++         G L     A+ +      +P  + 
Sbjct: 38  YREHIADKLAEIT--GIDAAKIFDRLL--WTDKLDKGDLVLPVPALGI----KKNPQELC 89

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS-----------SIVVSGIEYGR 114
           + +  +      V+         +  +  P+ L   +            +    G+    
Sbjct: 90  KELAEKFPESDLVERPTPV-AIHLQFFFKPNTLTHTVIGRILEAKAAFGTNGNQGLRDPA 148

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +      K+ IEF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q 
Sbjct: 149 DPSKGKKKIIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQY 208

Query: 175 NTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK------------------------ 207
             LA    +      + N+ +L   P  +   VY+K                        
Sbjct: 209 GLLANGYKY------FGNEEELLKDPINHLFNVYVKINNMVAEQDGPIKELKEQIKTKKE 262

Query: 208 ----------------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                            V ++   +   + +   +++ L + + +   ++ K  R     
Sbjct: 263 KNEDVSELQAQLDKLVDVSEDEKARRYFKSMEDGDQEALALWRRFRDLSIQKY-RQTYAR 321

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           LNI  D++  E        +     ++                        +     ++ 
Sbjct: 322 LNIDFDVYSGESQIKNESMTAAYKTMEK-------------------AGVSEKSDGAVIV 362

Query: 312 RSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLE 368
             T  G        +++ DG+  Y   D+     + E   FD MIYV+      ++ +L 
Sbjct: 363 DFTKHGAKKLGKAIIVRKDGTPLYLTRDIGAILERDEAYHFDKMIYVVAMQQDLHLAQLF 422

Query: 369 AVAAAVSEK-------KAQINVL------------LCELVRLYRDGMPIKMSKRAGDFIT 409
            +   +  K            ++            L ++++  RD M   M K    +  
Sbjct: 423 KITELMGYKDLASRCQHVNFGMVRGMSTRKGTVKFLDDILQDVRDKMHEVMKKNTEKYEQ 482

Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           +       D +G  SV    +  K     DF+   +    + +   Y+QYA+AR  SI R
Sbjct: 483 VADPEKTADILGITSVMVQDMTGKRINGYDFNLEAMTSF-EGDTGPYLQYAHARLCSIVR 541

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++         D+        +   +   + L+  LA++P V+ N T   EP  +  YL+
Sbjct: 542 KSG-------LDVTQLGSANLDILTEPHAVNLVRLLAQWPDVLMNTTRTLEPTTIITYLF 594

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +  +    +   +       V  +  ++ M R+ L  +   ++NSG+ I+G+     
Sbjct: 595 RMTHMLSSSYDVLK-------VVGSEPEVKMARMALYESARLVLNSGMRILGLSPVER 645


>gi|170097623|ref|XP_001880031.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645434|gb|EDR09682.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 591

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 108/556 (19%), Positives = 200/556 (35%), Gaps = 65/556 (11%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS--------GIEYGR 114
            +A  ++   + D  + ++ +  K F++  L+   +   + + V +          EYG 
Sbjct: 68  EVAAKVIENFQPDEWISTI-VHDKAFLHFKLNTESMIHDILTQVHALTHLTPSKQPEYGT 126

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           NL GKG KV IE+ S N     HVGH R  ++G  LA+L    G+EVT   Y+ D G Q 
Sbjct: 127 NLTGKGKKVVIEYSSPNIAKSFHVGHLRSTIIGGFLANLYKACGWEVTSLNYLGDWGTQF 186

Query: 175 NTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
             +A     +  Q+ L  +        Y  V             ++      E+     +
Sbjct: 187 GMIATGYEKYGSQEELEKDAIKHLFDVYVKVNKDAEADPEVKVEAARWFKRMEDGDESAL 246

Query: 234 KDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           K++ V   +  K    + + LNI  D +  E    +     +   +  L   G +     
Sbjct: 247 KNWRVWRELSVKKYEGEYERLNIHFDEYTGESMVGK---ESMDTALKRLEELGLI----- 298

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350
               S   +  D+ + +L              + K DG+  Y   D+     +YE+  FD
Sbjct: 299 --ADSNGAKIVDLKKYKL----------ESAVVRKKDGTSIYLTRDIGGAIERYEKYKFD 346

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------INVLLCELVRLY 392
            MIYV+ S    ++ +   V   +    A+                    V L ++++  
Sbjct: 347 KMIYVVSSQQDLHLAQFFKVLDLMEFPWAKNLVHVNYGLVQGMSTRKGTVVFLDQIIKEA 406

Query: 393 RDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              M  +M K    +  +     V  E+G   V+   +  K      F++ ++K   + +
Sbjct: 407 ASVMHDQMMKNEDKYNAVEDPETVSREIGITGVKIQDMAAKRINNYTFNWDRMKSF-EGD 465

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QYA+ R  SI R+   + P           +   S       ++   L  YP V+
Sbjct: 466 TGPYLQYAHVRLASIGRKNPHLIPLPPPSQIDTTSLSSYS----QAREIAFLLGTYPDVV 521

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A    EP  +  + + LA      W        +      + +    ++ L      +
Sbjct: 522 KVALKTHEPSGVVTFAFRLAHAISSAWD------VVIVKGEEDLEKARAKMFLYECTRDV 575

Query: 570 INSGLNIIGVESPNEM 585
           + S L ++ +     M
Sbjct: 576 LGSALRLLSIRPLERM 591


>gi|269925558|ref|YP_003322181.1| arginyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789218|gb|ACZ41359.1| arginyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 601

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 125/640 (19%), Positives = 236/640 (36%), Gaps = 108/640 (16%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-------------- 54
           S+ K  ++E   ++ + +   + I + +        L+T+    L+              
Sbjct: 7   SQAKEAIREAIAQLGLPQ--PENIDLRQIPFSGQWGLATSVCHQLARNEVQVDIPEGLSK 64

Query: 55  RPLGL----DPLT----IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106
           +                +AE I   +        V  A  G++N++  PS +   L + V
Sbjct: 65  KEARKLLEAASRERAQSLAESIANYLSRKGIFADVQ-AQNGYVNMFFEPSDVALRLLATV 123

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY-EVTREY 165
               +       K   V +E+   N     H+GH R   +GD++A ++ F+GY +V +  
Sbjct: 124 HEQGDSYGRGNPKSETVMVEYGQPNTHKQFHIGHLRNTALGDSIARILDFAGYRKVLKAS 183

Query: 166 YINDAGAQINTLALSVFWRYQQALYNN--------DSDLPEGYYPGVY-LKHVGKELADK 216
           YI D GA +    +   W Y +                  E  Y           +   +
Sbjct: 184 YIGDIGAHV----IKWLWGYNKWHSGEQPPADPYKIGPWLESIYVEANSAIESNPDYQRE 239

Query: 217 YSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           Y      +     + + + +     + +   R   K L++  D++  E DF       ++
Sbjct: 240 YRDLFARWDRRDPEVVELWRRTREWS-LNYFRRIFKELDVNFDVWFYESDFEEPGKKIVQ 298

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D+++    +             +      +D+K  L + T         L +SDG+  Y 
Sbjct: 299 DLLNKGVAE-----------IDEGAPIVRIDQKLGLEKET----YRTIVLQRSDGTSLYQ 343

Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVLLCELVRLY 392
             +LA  + K+ E   D ++ V+    + Y +++  V   +  ++A+    +  ELV L 
Sbjct: 344 TKELALTRTKFDEYKVDRILNVVDVRQTLYFQQVFKVLELLGYEQARNSQHIPYELVSLP 403

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425
                  MS R G  +       E                           V   S++F 
Sbjct: 404 TGP----MSSREGTTVGYDEFATEMYERALEVVREKNPEMPQEQQERIARIVSMGSMKFG 459

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML R N+ +L FD  +  +    +   YVQYA+AR   I  +A    PD+D++       
Sbjct: 460 MLNRDNTRVLVFDKEEALDFDGFS-APYVQYAHARACRILEKA----PDIDWENLRIG-- 512

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
               E  T E  L+  ++     +E A    +P  +  Y+Y+LA  F+  +   R +P L
Sbjct: 513 ----ELSTVETNLLEMISRLNESVERAAREYKPLHVVNYVYELAKTFNEFY---RVSPVL 565

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           R       ++   RL +V+A    + + L ++G+E+P  M
Sbjct: 566 R----AEEEVRNFRLAVVYATKVCLANSLYLLGIEAPEVM 601


>gi|145481313|ref|XP_001426679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393755|emb|CAK59281.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 118/614 (19%), Positives = 232/614 (37%), Gaps = 98/614 (15%)

Query: 15  LKEIDCKIKVEKKILDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           L+ I   +  E K    I I  +  +    G L T                +A+ + +  
Sbjct: 40  LESISNNLNFEYKTPTVIRIFNQFKKQNLFGDLKTEV-------------EVAQKVASTE 86

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
             D  +  V    KGF+N+ L+  ++ + +++++V+G+++    + K  KV ++F S N 
Sbjct: 87  CQDNVIQKVEAIDKGFLNIQLNDKFIEEEINALLVNGLKFP---LEKKQKVAVDFSSPNI 143

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
              MHVGH R  ++G++L  ++ F G EV R  +I D G Q   L   +   Y     N 
Sbjct: 144 AKEMHVGHLRSTILGESLCRILEFQGQEVVRINHIGDWGTQFGMLINHLLEEYPDYQTNR 203

Query: 193 DS--DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            +  +L + Y          +E   K    ++     + L  +   + + + ++ R +  
Sbjct: 204 PALKELEDLYKEAKKKFDSNEEFKVKSQQFVVKL---QALDPICIDAWKMICELSRQEYN 260

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +  + ++ I+E      +P  + +I+     +G V                ++D+   +
Sbjct: 261 KIYQRLNVKITEYGESYYNP-ILNEIVKECEAKGIV----------------ELDQGAKI 303

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEA 369
            R  + G+ V   ++K DG Y Y   D+A  K +  E   D ++Y+       + K +  
Sbjct: 304 IR--VKGEKVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLYLTDVGQWNHFKLVFE 361

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
            A  +   +     +      L       K   R+GD + L  ++DE             
Sbjct: 362 GAKLMGWHQPPNTSMEHMGFGLVLGPDGKKFKTRSGDTVKLIDLLDEAKERALKQIQQRV 421

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     +G  ++++  L +      +FD+ K+ +  K N 
Sbjct: 422 QENQQGKEFSTGTALSPEEFETAAERMGIAAIKYYDLKQNRISDYNFDYDKMLD-PKGNT 480

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ Y+Y R  SI R++       DF++F  +   +       E  L   L  +  V++
Sbjct: 481 AVYLMYSYVRMLSILRKSGIQ----DFEVFKAD--HKFKITHQHERHLAAQLLRFVDVLQ 534

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           + T       L  Y+YD+       ++  R           N + T  RL L  AV  ++
Sbjct: 535 SVTDQLAINWLCDYIYDICVKIAEAYNQYRIL---------NDEHTQTRLLLCEAVRMVL 585

Query: 571 NSGLNIIGVESPNE 584
                ++G+E   +
Sbjct: 586 LQSFYLVGIEPIEK 599


>gi|325973384|ref|YP_004250448.1| arginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651986|gb|ADX98068.1| arginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 556

 Score =  300 bits (768), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 136/589 (23%), Positives = 252/589 (42%), Gaps = 47/589 (7%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +  +  ++LK  L+++  + K    +LD++ +E  ++   G  STN   ++S        
Sbjct: 1   MILELKNQLKASLRKVL-ENKGFSLLLDKVELEETKNSKFGFFSTNLPFLISSAYKKSIE 59

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKG 120
              +++++    +  +  V  A +G++N ++SP  +     S +     I    N   K 
Sbjct: 60  ESEQILISSFPKNELIQKVE-AVQGYLNFFISPDLIENFFRSSLKRRKIISRANNEENKK 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +E VSANPTG +H+GH R  V+ DT+++L+ ++   V R Y INDAG QI  L  S
Sbjct: 119 DKYFVEIVSANPTGILHIGHIRNGVITDTISNLLEYNNNSVFRTYLINDAGTQIEELLRS 178

Query: 181 VFWRY----QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           +   Y    +  +  + ++     Y G  +K   + ++ K+        +++    +K +
Sbjct: 179 IHNFYSFTSRGGVGISLTEEINVKYTGSEIKECAEAISQKFGYNW-ELTDKELTHQIKLF 237

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +V+  +  I+ +LK+L+IQ D +  E                         E  L     
Sbjct: 238 AVEFFLDKIKKELKSLSIQVDSWDYESRI--------------------CSESALTNLIK 277

Query: 297 KTTQKCDMDRKQLLFRSTMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNM 352
           K      +    L F+++    G + D  L+KSDG  +YF  DL Y   K E       +
Sbjct: 278 KLEDFIYLKDNALWFKTSAFLEGYEKDDVLVKSDGKISYFGQDLIYHLHKLEFLGKTGTI 337

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +  +  DH G++ R++A   ++   +  +   +  L RL  +G  I  SKR   F++   
Sbjct: 338 VNTLAEDHKGHIDRMKAFFYSIGVPQDSVKYKITRLSRLIMEGKKIVFSKRENIFLSAEE 397

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + + +  D +R+ +  R     LD D  K+K +   N +FY+ YAY+R   I  +     
Sbjct: 398 LKEHLSVDEIRWFLCSRDEENELDIDLSKLKNKDYNNQIFYILYAYSRALKITER----- 452

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             + FDL   + +  E      E  LI  +       + A    + + ++ YL+ LA  F
Sbjct: 453 --IYFDL-SESKLSFEKLDSEVEQSLINSVLSVELKFQKAIQTLKVHIMSDYLFSLAKKF 509

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           H  +        +  +   N +  + R  LV  V  I +  L +  +  
Sbjct: 510 HSFYES------VSVINEPNTETQITRFALVKLVLRIFSELLPLFRITP 552


>gi|257894701|ref|ZP_05674354.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257831080|gb|EEV57687.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 470

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 105/514 (20%), Positives = 200/514 (38%), Gaps = 74/514 (14%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + ++V     YG + IG    V I+  S N   P+ +GH R  V+G+++  +M   GY+ 
Sbjct: 1   MQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQP 60

Query: 162 TREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
            R  ++ D G Q   L ++   W  ++A+       P      +Y++    E+A+     
Sbjct: 61  IRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF--HEVAETEPE- 113

Query: 221 LLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIR 274
            LN     W   +++    ++Q       + +K  N  +D+     D   G+      + 
Sbjct: 114 -LNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLNGEAFYNDKMD 172

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +I+  L  +  + E        K  +  D+    L              + KSDG+  Y 
Sbjct: 173 EIVKLLEEKHLLNE-------DKGAEIVDLSAYDL----------NPALIKKSDGATLYI 215

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL--------- 384
             DLA    +     F   +YV+G++ S + K+L+AV   +    +              
Sbjct: 216 TRDLAAALYRKRTYDFKQSLYVVGNEQSYHFKQLKAVLKEMGFDWSDDMHHIPFGLITQG 275

Query: 385 -------------LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                        L E++         ++S++  D      V  +VG  +V F  L    
Sbjct: 276 GKKLSTRKGKIVLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQVGVGAVIFHDLKNDR 335

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
               DF+  +V     E    YVQY +AR  S+  +A           F  +     +  
Sbjct: 336 LNTFDFNLEEVVRFEGE-TGPYVQYTHARAVSLLEKAG----------FVPSETADYALN 384

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           D +  +++  + +YP  + +A    EP  +A +   LA  F+ +++H +           
Sbjct: 385 DDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLAQAFNKYYAHTKIL--------A 436

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +    RL LV+AV  ++   L ++G+ +P++M
Sbjct: 437 DDEQKEARLALVYAVTVLLKEDLRLLGLHAPDKM 470


>gi|317146750|ref|XP_001821636.2| arginyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 647

 Score =  299 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 115/655 (17%), Positives = 218/655 (33%), Gaps = 121/655 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIA 65
           +   +   L          +KI  R+      D   G L     A+ +    G  P  + 
Sbjct: 38  YREHIAEKLGA--ATGIDSEKIYTRLQWSSTLDK--GDLLLPVPALGIK---GKKPQELC 90

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLY----LSPSYLRKILSSIVV------SGIEYGRN 115
           E +  +      V      G   +  +    L+ + + +IL            G+    +
Sbjct: 91  EELAQKFPESDLVLPPTCVGIHLVFFFKPQPLTHTVVSRILKEKAAYGTNGNQGLRDPSD 150

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q  
Sbjct: 151 PSKGQKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYG 210

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL-ADKYSSEL 221
            LA        +   N D   P  +   VY             +K + +++ A K  +E 
Sbjct: 211 LLANGYKQFGSEEALNKD---PINHLFDVYVKINNVVAQQEGPIKELKEQIKAKKEKNED 267

Query: 222 LNFPE--------------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           ++  E                          E+ L + + +   ++ K  R     LNI 
Sbjct: 268 VSELEQELQKLVDASEDESARRYFKSMEDGNEEALGLWRRFRDLSIQKY-RQTYARLNID 326

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E        +   + ++                        +     ++   T 
Sbjct: 327 FDVYSGESQIKNESMTAAYETMEK-------------------AGVSEKSEGAVIVDFTK 367

Query: 316 VGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAA 372
            G        +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +  
Sbjct: 368 HGAKKLGKAIIIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITE 427

Query: 373 AVSEKK--AQINVLLCELVR-----------------LYRDGMPIKMSKRAGDF---ITL 410
            +  K   ++   +   +VR                   RD M   M K    +      
Sbjct: 428 LMGHKDLASRCQHVNFGMVRGMSTRKGTVKFLDDILGDVRDKMHEVMKKNEEKYQQVENP 487

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
               D +G  SV    +  K     DF+   +    + +   Y+QYA+AR  SI R+++ 
Sbjct: 488 EETADILGITSVMVQDMSGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLCSIIRKSE- 545

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                  ++        +   +T    L   LA++P V+ N T   EP  +  YL+ +  
Sbjct: 546 ------LNVEELGSANLDLLTETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMTH 599

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +   +       V  +  +L   R+ L  +   ++ +G+ ++G+   + M
Sbjct: 600 TLSSSYEVLK-------VVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSRM 647


>gi|156937719|ref|YP_001435515.1| arginyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|166232795|sp|A8AB06|SYR_IGNH4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|156566703|gb|ABU82108.1| arginyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 622

 Score =  299 bits (767), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 145/653 (22%), Positives = 246/653 (37%), Gaps = 99/653 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIE-RPRDCAHGHLSTNAAMILSRPLGL 59
           MY+ ++  S     + E   +  +E +  +   +  RP     G L  +     ++ LGL
Sbjct: 1   MYVLSETKSNFLKLIAEALKRRGLEVEEEELERLAGRPPSPEMGDLGVSL-FRYAKKLGL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +   +   I+          A  GF+N+ L PS+L +       S  +YG+     
Sbjct: 60  RPEELTSELKGEIEGRLAGVKEVKAIGGFLNVELEPSWLAERALRE-ASREDYGKWSF-- 116

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             ++ +E  SANP  P+HVGH R   +GD+L  ++   G +V   +YIND G Q+  L  
Sbjct: 117 SGRLVVEHTSANPVHPLHVGHARNMFLGDSLVRILKNWGADVQSRFYINDMGRQVAVLVY 176

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVG---------KELADKYSSELLNFPEEKWL 230
            +    +  L   + + P+ +Y  VY               +   K   E+L   E KW 
Sbjct: 177 GLLKLGR--LEPPEGEKPDHWYGKVYSVANALVELNSPSKGDDEKKEWEEVLKELESKWP 234

Query: 231 PIVKDYS---------------------------------VQAMMKIIRDDLKALNIQHD 257
            IV++                                   V  ++K  ++ ++ + +  D
Sbjct: 235 EIVREMKEKFDDEDPEAKVSELMKKYEEGDPEVKETFRKVVNEVLKGFKETMERVGVNVD 294

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E D        +  II+    +G V E              ++ R+    R     
Sbjct: 295 KWDWESDLV--WSGEVDKIINMAKEKGLVIEKDGALVMVFKNLNDEVRRR---LRIPKGL 349

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 L +SDG+  Y   D+AY   K+E    D +I V+ ++      +L      +  
Sbjct: 350 QIPPLVLKRSDGTTLYTTRDIAYTIKKFEEFRADRVINVIAAEQRLPQIQLRLALWELGF 409

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR------------- 423
           K+   N++      +   GM  KMS R G  ITL  ++DE                    
Sbjct: 410 KEYAENLIHYAYEMVNVPGM--KMSGRRGRMITLDWLLDEAERRVRELVEGRSEAEDVDE 467

Query: 424 -----------FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
                      F M+     + + F + +V    + N   Y+QY YAR   I R+  +  
Sbjct: 468 VVKKVAVGAVKFAMVSVSPEKPITFKWEEVLNFER-NSAPYLQYTYARAVGILRKGGE-- 524

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
           PDL+   + +               +I+ +AE+P V   A    +P  +A YL  LA  F
Sbjct: 525 PDLERADYSKA---------EKYKDMILSIAEFPEVARKAAEDLKPDLIATYLLSLADKF 575

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +            +  +  L  ++L LV AVA+ I  GL ++GVE+P  M
Sbjct: 576 NEFYHKE------PVAKEPDEGLRNLKLALVKAVANTIRRGLWLLGVEAPARM 622


>gi|67970581|dbj|BAE01633.1| unnamed protein product [Macaca fascicularis]
          Length = 454

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/485 (20%), Positives = 194/485 (40%), Gaps = 66/485 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NND 193
           MHVGH R  ++G++++ L  F+GY+V R   + D G Q   L   +  ++   L      
Sbjct: 1   MHVGHLRSTIIGESVSRLFEFAGYDVLRLNRVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            DL + +Y     +   +E   K + + +   + K   I K  + + +  + R +   + 
Sbjct: 61  GDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AWKLICDVSRQEFNKIY 117

Query: 254 IQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
              D+ + E    F++     + DI+     +G+V                  D ++++F
Sbjct: 118 DALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD---------------DGRKIVF 159

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV 370
              + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV+ S  S + + + A 
Sbjct: 160 ---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAA 216

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
           A  +     ++  +      +       K   RAG+ + L  ++ E              
Sbjct: 217 AQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 276

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          +    +++  L         F F K+ +  + N   Y+ YA+ R 
Sbjct: 277 DKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRI 335

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520
           RSI R A     ++D ++  +     +   D   E +L   +  +P +++        + 
Sbjct: 336 RSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHT 390

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  Y+Y+LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++
Sbjct: 391 LCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEAVAAVMAKGFDILGIK 449

Query: 581 SPNEM 585
               M
Sbjct: 450 PVQRM 454


>gi|116250831|ref|YP_766669.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255479|emb|CAK06555.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 568

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/588 (20%), Positives = 209/588 (35%), Gaps = 85/588 (14%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           R      G L  N  M L++    +P  +    VA        + V +AG GF+N  L+ 
Sbjct: 28  RSARPEFGDLQCNDVMRLAKSAEKNPRLL-AAEVAEAARSALFEDVSVAGPGFVNFRLAD 86

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           + +    ++++               +  I+F   N    +HVGH R  V+G++L  ++ 
Sbjct: 87  AVVAAEATAMLADPSLAAEKA--DPMRTVIDFGGPNVAKALHVGHLRSFVIGESLRRILV 144

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G++V  + ++ D G Q+  L L               DL     P  +     +EL  
Sbjct: 145 EIGHDVLSDIHLGDWGLQMGKLLLGAALAAGWKA----GDLTSFIDPLAFEAMTVEELGA 200

Query: 216 KYSSELLNFPEEKWLPIVK---------DYSVQAMMKIIR--------DDLKALNIQHDI 258
            Y S      +E  L + +         D  + A    +R        D  + L+   D+
Sbjct: 201 LYMSGNAACEDEALLALARILTTKLQDGDPLLTAAWARMRAISLASISDTAEMLDAHFDL 260

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
              E D H    + +  ++D+L  +G   +                    L+   +  G 
Sbjct: 261 LQGESDAH----AEVAPMLDDLMARGLARQS----------------EGALIIDVSADGL 300

Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
             + P   L KSDG+  Y   DLA  + +  E G   ++Y      + ++  + + A   
Sbjct: 301 PDNVPPLLLRKSDGAALYGTTDLATLRQRVREIGARQIVYCTDDRQALHISSVFSAARKA 360

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-----------------EV 417
              +               DG P K   R G   +LR ++D                  V
Sbjct: 361 GYAEGVELRHATFGTVRGNDGRPFK--TRDGFAASLREMIDLALTKSSEKVADSQAATVV 418

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  +++F  L         FD  K+   S+     Y+QYAYAR  SI  +A++       
Sbjct: 419 GLGALKFADLSTPRKTGYVFDIDKMIS-SEGRTGPYLQYAYARICSILDKAEEAGITPAA 477

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           D    +          SE  +++    YP  +  A    EP+++A   Y +A  F   ++
Sbjct: 478 DTVSIS--------HPSERAVLIECLWYPHSLSEAARHLEPFEIADRAYQVADAFSRFYT 529

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     ++A +      RL     VA +I   L ++G+ +   M
Sbjct: 530 DC------PVLKAEDP---SGRLATCKLVARVIGKCLELLGIGTVRRM 568


>gi|313677327|ref|YP_004055323.1| arginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312944025|gb|ADR23215.1| arginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 596

 Score =  299 bits (765), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 115/641 (17%), Positives = 239/641 (37%), Gaps = 102/641 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           + L  +  S      K +  +  +++ +   I I+  R    G   T     L R   L 
Sbjct: 2   LNLTEELKSLSLKAFKSLF-EQDLDENL---IQIQPTRKEFEGS-HTLVCFPLGRFSKLS 56

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   ++ + ++ S F   KGF+N+  +     +I S I+ +     +     G
Sbjct: 57  PEQTAKAIGEFMQENSELVSGFNVVKGFLNIVFADKVWLQIASDILNTPNFGFKAET--G 114

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +E+ S N   P+H+GH R   +G ++A ++  +G +V +   IND G  I   ++ 
Sbjct: 115 REVMVEYSSPNTNKPLHLGHLRNNFLGYSVAQILKANGNKVHKVQIINDRGIHICK-SMV 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            + ++ +      S +      G Y     +    ++A+   +       EK  PI+K+ 
Sbjct: 174 AWQKFGEGETPESSGMKGDKLVGKYYVIFDQKYKAQIAELVEAGKTKEEAEKEAPIMKEA 233

Query: 237 SVQAMMKIIRD--------------------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
               +    ++                      K + +  D    E          +   
Sbjct: 234 QEMLLKWEQKEPETYALWEKMNGWVYKGFENTYKTMGVDFDKLYYESQTFSLGKEEVLRA 293

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++     G  Y+                +   +    T  G D ++ LL+ DG+  Y   
Sbjct: 294 VEE----GLAYKK---------------EDGSVWIDLTEDGLD-EKLLLRKDGTSVYMTQ 333

Query: 337 DLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           D+     +Y R F  +   IY +G++   + K L  + A +  K A+    L   +    
Sbjct: 334 DIGTAILRY-RDFPKIEQQIYTVGNEQEYHFKVLFIILAKLGYKWAENCYHLSYGMVDLP 392

Query: 394 DGMPIKMSKRAGDFITLRHVVDEV-----------------------------GSDSVRF 424
            G   KM  R G  +    +++++                             G  ++++
Sbjct: 393 TG---KMKSREGTVVDADDLMEDMFATAKSRTDELGKIDGFNEAEAQELYRQLGLGALKY 449

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L     + + F+  +  +  + N   ++QY +AR  +I R+A+ +  +         V
Sbjct: 450 YLLKVDPVKRMMFNPEESIDF-QGNTGPFIQYVHARICAILRKAEQLGIE-------PQV 501

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
               S  + +E  ++  + ++P  IE A     P  +A Y+Y++A  ++  +S       
Sbjct: 502 SESLSSLEPTENNVLQLIIDFPNKIEEAANGYAPSIIANYVYEVAKAYNKFYS------E 555

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +     +++     R+     VA  I   +N++G E+P +M
Sbjct: 556 VSIFNESDKDALAFRIGFSRIVAETIEKSMNLLGAEAPTKM 596


>gi|83945321|ref|ZP_00957669.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83851155|gb|EAP89012.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 587

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 115/629 (18%), Positives = 220/629 (34%), Gaps = 95/629 (15%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              +L + +      + +   +      +RP          N AM  ++     P  +AE
Sbjct: 4   IVEQLSSAVGAAFEAVGLSADLGTVFESDRPDLAP---YQCNGAMAAAKQAKKAPRAVAE 60

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            + AR+        V IAG GF+N+  + +      + +       GR       ++ I+
Sbjct: 61  DVKARLAELHPHLEVEIAGPGFLNITPAGNVYAIRANGLSEDDRVGGR-ESTAPKRLIID 119

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F   N   PMHVGH R +V+GD+L  LM F G++VT + ++ D G Q+  L   +     
Sbjct: 120 FGGPNVAKPMHVGHLRSSVIGDSLQRLMRFRGHDVTSDIHLGDWGLQMGHLVTELEDEKP 179

Query: 187 QAL---------YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-------WL 230
             +         Y ++  +       +Y +   K   D   +        +       + 
Sbjct: 180 DLVYYDADFTGPYPDEPPVTIEDLARLYPQASAKAKEDPERNARSRKATAELQAGRPGYR 239

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            +++ +   ++  + ++D  AL +  D++  E D +   P  +RD  D            
Sbjct: 240 ALLRHFINVSIAAL-KEDFGALGVHFDLWKGESDVNDLIPELVRDFKDR----------- 287

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKC-KYE 346
                       +      + R     D  +     L+ S GS  Y   DLA     K E
Sbjct: 288 ---------GVAEESDGAWIVRVAREDDKKELAPLILVSSQGSALYATTDLATILDRKRE 338

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +  +  +YV+    S + +++   A      ++  +  +    V         ++  RAG
Sbjct: 339 QDPELTLYVVDLGQSDHFEQVFRAAYKAGLAEEGALEHVKFGTVNGTDGK---RLRTRAG 395

Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436
               L  +++E                             V + +++F  L    +    
Sbjct: 396 GTFRLADLINEARDRARARLNEAGLGAELTSDEFETVARAVANAAIKFSDLQNVRTTNYI 455

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD  +     +     Y+QY   R +S+ ++A D        + P  V    +  D +E 
Sbjct: 456 FDLDRFVSF-EGKTGPYLQYQAVRIKSLLKKAGDQG------IAPGAV----TISDKAEE 504

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
            LI  L  +   +  A   + P  L  + Y LA  F G ++          +   +  + 
Sbjct: 505 ALIRRLDAFEGALSRAERDRAPNVLCEHAYGLAQAFSGFYAAC------PILPEKDEAIR 558

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL+L     + +   L +IG++ P  M
Sbjct: 559 ASRLRLAQTTLTQLEIVLGLIGIDVPERM 587


>gi|225684678|gb|EEH22962.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 720

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 112/660 (16%), Positives = 221/660 (33%), Gaps = 139/660 (21%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +            ++       G L     A+ +       P  +A+ I+ 
Sbjct: 113 RAHIAELVAEALGVDSQTVYPRLQWTNSLDKGDLVLAAPALQI--KGKKPPEVVAQ-ILE 169

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
            +     +++    G   I  +  P  L K +   +             G+    +    
Sbjct: 170 NLTPSDLINTPIAVGTH-IQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKG 228

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA 
Sbjct: 229 KKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVIKMNYLGDWGKQYGLLAN 288

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSS----------------- 219
                     Y N+ +L   P  +   VY+K + K++A++                    
Sbjct: 289 GY------EKYGNEEELVKDPINHLFDVYVK-INKDVAEQEGPIKELREQIKAKKDKDED 341

Query: 220 ------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                                   + +   +EK L + + +   ++ K  ++    LNI 
Sbjct: 342 ITVLEKELQAKIDVSYDEMARRYFKSMEDGDEKALALWRRFRDLSIEKY-KETYARLNIG 400

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D +  E       P  +    + + + G                  +     ++     
Sbjct: 401 FDCYSGESQV---KPESLAKAYEAMEKTG----------------VSENSEGAVIVDFAK 441

Query: 316 VGDDV--DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAA 372
            G        +++ DG+  Y   D+A    +  E  FD MIYV+ +    ++ +L  V  
Sbjct: 442 HGAKKLGKAIVIRKDGTPLYLTRDIAAIVERDEEYHFDKMIYVVAAQQDLHLAQLFKVTE 501

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD--------SVRF 424
            V  K       L +  +    GM   MS R G    L  ++ +VG          + ++
Sbjct: 502 LVGRKD------LADRCQHVNFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMKKNATKY 555

Query: 425 --------------------MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                                 +  K     +F+   +    + +   Y+QYA+AR  S+
Sbjct: 556 EQVEDPEKTADILGITSVMVQDMSGKRINGYEFNLDVMTSF-EGDTGPYLQYAHARLCSM 614

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+A       D D             +   + LI  LA +P V+ N T   EP  +  Y
Sbjct: 615 TRKA-------DVDPSELTTANLSLLTEPHAIDLIRLLAVWPDVVFNTTKTLEPTTILTY 667

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L+ +  V    +   +       V  +  ++   R+ +      ++++G+ ++G+   + 
Sbjct: 668 LFRMTHVLSSGYDVLK-------VVGSEPEVKKARMAMYDCARQVLSNGMRLLGLNPVDR 720


>gi|302661515|ref|XP_003022425.1| hypothetical protein TRV_03489 [Trichophyton verrucosum HKI 0517]
 gi|291186368|gb|EFE41807.1| hypothetical protein TRV_03489 [Trichophyton verrucosum HKI 0517]
          Length = 705

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 107/609 (17%), Positives = 204/609 (33%), Gaps = 127/609 (20%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      ++   + G      Y        ++ SI+ +   YG N  
Sbjct: 142 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 201

Query: 117 ---------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                         K+ +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 202 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 261

Query: 168 NDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL 213
            D G Q   LA     +  ++ L  +    P  +   VY             +K + +++
Sbjct: 262 GDWGKQYGLLASGYEKYGSEEELLKD----PINHLFEVYVKINQDVAAQEGPIKELKEQI 317

Query: 214 ADKYSS---------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             K                              + +   +EK L + + +   ++ K  +
Sbjct: 318 KAKKEKNEDVTELEKKLEPLVDASYDEQARRYFKSMEDGDEKALELWRRFRDLSIDKY-K 376

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                LNI  D++  E              ++N                       +   
Sbjct: 377 QTYARLNIDFDVYSGESQVKDESIKKSYKAMEN-------------------AGVSESSE 417

Query: 307 KQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGY 363
             ++      G        +++ DG+  Y   D+A    +  E  FD MIYV+ +    +
Sbjct: 418 GAVIIDFAKHGAKKLGKAIVIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELH 477

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + +L      V +K       L         GM   MS R G    L  ++ +VG     
Sbjct: 478 LAQLFKTTELVGKKD------LANRCEHISFGMVRGMSTRKGTVKFLNDILKDVGEKMHE 531

Query: 424 FM----------------------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
            M                             +  K     +F+   +    + +   Y+Q
Sbjct: 532 VMQKNQAKYEQIEDPVATADVLGITSVMVQDMSGKRINGYEFNLENMTSF-EGDTGPYLQ 590

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA+AR  S+ R+A+    +L                ++  + L+  LA++P V+ NA+  
Sbjct: 591 YAHARVCSVTRKAEINPEELGSADLSL-------LTESHAVDLVRLLAQWPDVVFNASKT 643

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +  YL+ +  +    +   +       V  +  ++ M R+ L  +   ++++G+ 
Sbjct: 644 LEPCTILTYLFRMTHMLSSGYDVLK-------VVGSEPEVKMARMALYESARQVLHNGMR 696

Query: 576 IIGVESPNE 584
           ++G+     
Sbjct: 697 LLGLNPVKR 705


>gi|145481811|ref|XP_001426928.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394006|emb|CAK59530.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 119/613 (19%), Positives = 226/613 (36%), Gaps = 96/613 (15%)

Query: 15  LKEIDCKIKVEKKILDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           L+ I   +  E K    I I  +  +    G L                + +A+ I A  
Sbjct: 40  LESISNNLNFEYKTPTVIRIYNQFKKQNLFGDL-------------KSEVEVAQKIAATE 86

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
             D  +  V    KGF+ + L+  ++   ++SI+ +G+++    + K  KV +++ S N 
Sbjct: 87  GQDNVIQKVEAIEKGFLTIQLNNQFIEDEINSILANGLKFP---LEKKQKVVVDYSSPNI 143

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
              MHVGH R  ++G++L  ++ F G EV R  ++ D G Q   L   +   Y     N 
Sbjct: 144 AKEMHVGHLRSTILGESLCRILEFQGQEVVRVNHVGDWGTQFGMLINHLLEEYPDYQTNK 203

Query: 193 DS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +    E  Y     K    E     S + +     + L  V   + + +  + R +   
Sbjct: 204 PALKELEDLYKEAKKKFDSNEEFKLKSQQFVVKL--QALDPVCIDAWKMICDLSRQEYNK 261

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +  + ++ I+E      +P  + +I+     +G V                ++D+   + 
Sbjct: 262 IYQRLNVKITEYGESYYNP-ILNEIVKECEAKGIV----------------ELDQGAKII 304

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV 370
           R  + G+ V   ++K DG Y Y   D+A  K +  E   D ++Y+       + K +   
Sbjct: 305 R--VKGEKVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRLLYLTDVGQWNHFKLVFEG 362

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
           A  +   +     +      L       K   R+GD + L  ++DE              
Sbjct: 363 AKLMGWHQPPNTSMEHMGFGLVLGPDGKKFKTRSGDTVKLIDLLDEAKERALKQIQLRVQ 422

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    +G  ++++  L +      +FD+ K+ +  K N  
Sbjct: 423 ENQQGKEFSTGTALSPEEFETAAERMGIAAIKYYDLKQNRISDYNFDYDKMLD-PKGNTA 481

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            Y+ Y+Y R  SI R++       DF++F      +       E  L   L  +  V+++
Sbjct: 482 VYLMYSYVRMLSILRKSGIQ----DFEVFKGE--HKFKITHQHERHLAAQLLRFVDVLQS 535

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
            T       L  Y+YD+       ++  R           N + T  RL L  AV  ++ 
Sbjct: 536 VTDQLAINWLCDYIYDICVKIAEAYNQYRIL---------NDEHTQTRLLLCEAVKMVLL 586

Query: 572 SGLNIIGVESPNE 584
              +++G+E   +
Sbjct: 587 QSFHLVGIEPIEK 599


>gi|242009305|ref|XP_002425430.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212509247|gb|EEB12692.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 575

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 114/538 (21%), Positives = 212/538 (39%), Gaps = 75/538 (13%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAM---ILSRPLGL- 59
           F    + L +  KE   +   E K    +VI    +   G    N+AM    L +  G  
Sbjct: 57  FYSIQNTLVSIFKEAIQRAFPELKNAP-VVIAASNNSKFGDYQCNSAMPIVQLLKSEGKK 115

Query: 60  -DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            +P  +AE I + +     ++ + +AG GFIN+ LS +  +  L  I+ +G+   +  + 
Sbjct: 116 SNPREVAEKIKSCVSPHNLIEKLEVAGAGFINVTLSRTEGQNCLQFILKNGVLPPK--VN 173

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              +V ++F S N    MHVGH R  ++GD++++L+ F G++V R  ++ D G Q   L 
Sbjct: 174 AKCRVIVDFSSPNIAKEMHVGHLRSTIIGDSISNLLEFLGHDVVRVNHVGDWGTQFGMLI 233

Query: 179 LSVFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             +  ++   L  +      + +Y     +    E   K +   +   +      +K  +
Sbjct: 234 AHLEDKFPDYLTKSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQSHHPDYLK--A 291

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +  + R + + +  + DI I+E    F++   + +  ++  L  + ++ E       
Sbjct: 292 WNLICDVSRKEFQKIYQRLDIRITEKGESFYQ---TRMEKLVKELEAKNFLVE------- 341

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
                  D  RK +   S+     +   ++KSDG +TY  +DLA  K + E    D +IY
Sbjct: 342 -------DEGRKIMWGDSSS----IPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIY 390

Query: 355 VMGSDHSGYV---KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           V  S  S +    ++       ++ +K +I+ +    V L  D    K   R+G+ + L 
Sbjct: 391 VTDSGQSTHFDVLQKCAIKCGILNPEKVRIDFV-GFGVVLGEDKK--KFKTRSGETVRLV 447

Query: 412 HVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
            ++DE                             V    +++  L    +    F F K+
Sbjct: 448 DLMDEGLKRSLEKLKEKKRDEVLTPEELKKAQESVAYGCIKYADLSHNRNHEYVFSFEKM 507

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +  + N   Y+ YA  R +SI R A          L   +   Q S     E  L  
Sbjct: 508 LD-DRGNTAVYLLYALTRIKSIARSAGVTSQQ----LLEASKTTQISLDHDKEWNLGK 560


>gi|302417528|ref|XP_003006595.1| arginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354197|gb|EEY16625.1| arginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 653

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 108/543 (19%), Positives = 206/543 (37%), Gaps = 84/543 (15%)

Query: 88  FINLYLSPSYLRKILSSIV-----------VSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           FI  +   + L +++   +            +G+   ++       + +EF S N   P 
Sbjct: 150 FIQFWFKAAPLAQLVIPQIQQRTEDFGKNPRNGLRDPQDPSKGQKHMIVEFSSPNIAKPF 209

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H GH R  ++G  L+ L A +G++VTR  Y+ D G Q   LAL       +     D   
Sbjct: 210 HAGHLRSTIIGGFLSHLYAGAGWKVTRINYLGDWGKQYGLLALGYEKYGDEKALETD--- 266

Query: 197 PEGYYPGVYLKHVGKELADKYSS----------------ELLNFPEEKWLPIVKD--YSV 238
           P  +   VY+K +  +LA++                   E L+    ++   + D   + 
Sbjct: 267 PINHLFQVYVK-INNDLAEEKEKIAALEKEGKDASELKNEGLDEQARRYFKAMNDGEQAA 325

Query: 239 QAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            A  K  RD            LN+  D +  E               +++A      E  
Sbjct: 326 LAQWKKFRDLSIVRYKQTYAQLNVTFDEYSGESQVSE----------EDMAASAKTLEDK 375

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-G 348
                S      +  +      +   G  +++P++K  DG+  Y   D++    + ++  
Sbjct: 376 DISEVSDGAVVINFQKHV----AGKAGKSLEKPVIKKRDGTALYLTRDISELLHREKKYN 431

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD-- 406
           FD+MIYV+ S    ++K+L  +   +   +    V           GM + MS R G+  
Sbjct: 432 FDHMIYVVASQQDLHLKQLFKIIELMGFTETAKKVQHVNF------GMVLGMSTRKGNEE 485

Query: 407 ----FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                     V + +G  ++    +  K      F    +    + +   Y+QYA+AR  
Sbjct: 486 KYKQVENPDAVAETLGISAIMVQDMTGKRQNSYTFSLEAMTSF-EGDTGPYLQYAHARLS 544

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R+A    P+ D      +++ ++        +LI  L++YP  ++N     EP  + 
Sbjct: 545 SIMRKA--NIPEADLVDADLSLLTEKHAT-----ELIRMLSQYPDTVQNTLKTLEPTTVL 597

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ L  V    +   R       V  +  ++   RL L ++  +++ +G+ ++G+   
Sbjct: 598 TYLFKLTHVLSSSYDVLR-------VVGSEPEVLKARLALYYSTRTVLANGMRLLGLSPV 650

Query: 583 NEM 585
             M
Sbjct: 651 QRM 653


>gi|114570763|ref|YP_757443.1| arginyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315492|sp|Q0AMI8|SYR_MARMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|114341225|gb|ABI66505.1| arginyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 588

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 109/612 (17%), Positives = 206/612 (33%), Gaps = 98/612 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPR-DCAHGHLSTNAAMILSRPLGLDPLTIA 65
            + +L   L +    +++ +++     +   +          N AM  ++    +P  +A
Sbjct: 4   IADQLSAVLGDAFASLELPRELGR---VSPSKQKPEVFPFQCNGAMPAAKQAKTNPRELA 60

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             ++  +   P + +  IAG GFINL  +  +L    ++ +      G  L      V I
Sbjct: 61  AKLIEALHGIPQIGAAEIAGPGFINLRPA-EHLYGERAAEIAGDDRAGAPLAAAPRTVMI 119

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           +F   N   PMHVGH R +V+GD+L  L  F G  V  + ++ D G Q+  L   +    
Sbjct: 120 DFGGPNVAKPMHVGHLRSSVLGDSLQRLFRFRGDTVVSDIHLGDWGLQMGHLITELHEEQ 179

Query: 186 QQALYNN--------------DSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKW 229
              +Y +                DL   Y         G E  +  + ++  L      +
Sbjct: 180 PDLVYFDAAITDGYPSEPPVTIEDLARLYPQASVKAKAGPERLEISRSATAELQAGRPGY 239

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +++ + +   +  ++ D  AL +  D++  E D     P  + D              
Sbjct: 240 RALLRHF-IDVSVAALKRDFGALGVHFDLWKGESDVDPLIPGLVED-------------- 284

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE 346
                  K     +     L+ R    GD  +     L+   G+  Y   DLA    + +
Sbjct: 285 ------FKARGVAEESEGALIVRVARDGDKKELAPLILVSKTGAALYGTTDLATILDRKQ 338

Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRA 404
               D  +YV+      + +++   A      ++  +  +    V         ++  R 
Sbjct: 339 SVDPDLTLYVVDLAQGDHFEQVFRAAEKAGLAEEGALEHVKFGTVNGTDGK---RLRTRD 395

Query: 405 GDFITLRHVV-----------------------------DEVGSDSVRFMMLWRKNSELL 435
           G    L  ++                               VG  +++F  L    +   
Sbjct: 396 GGTFRLADLIASAIERADERLKEAGLAADVSAEEHARVARMVGLAAIKFADLQNYRTTNY 455

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-S 494
            FD  +     +     Y+ YA  R +S+ R+A +             V P E   D   
Sbjct: 456 VFDLDRFTSF-EGKTGPYLLYAAVRVKSLMRRAAEAG-----------VTPGEILVDAQE 503

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L++ L  +   ++NA   + P  L  + + LA  F   +S          + A +  
Sbjct: 504 ERDLVLCLDAFGAALDNAADNRAPNALCDHAFTLAQAFSKFYSAC------PVLVAEDDA 557

Query: 555 LTMMRLQLVHAV 566
           +   RL L  A 
Sbjct: 558 VKASRLALAEAT 569


>gi|212527372|ref|XP_002143843.1| arginyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210073241|gb|EEA27328.1| arginyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 653

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 117/649 (18%), Positives = 226/649 (34%), Gaps = 115/649 (17%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           + ++ E   ++      +    +        G L+   A    +  G  P  +A  +  +
Sbjct: 45  REHISEKLAEVTGIDPQMIYTKLAWTNSLDKGDLNLPVA--ALQIKGKKPQDLAVELAEK 102

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGKG 120
                 V+     G   +  +  P  L K + S ++            G+    +     
Sbjct: 103 FPESDLVEKPTTFGVH-LQFFFKPGPLTKTVISRILENKSTYGTNGNLGLRDPSDPSKGK 161

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EF S N   P H GH R  ++G  +A+L   +G+EV R  Y+ D G Q   LA  
Sbjct: 162 KKVIVEFSSPNIAKPFHAGHLRSTIIGGFIANLFTITGWEVIRMNYLGDWGKQYGLLANG 221

Query: 181 VFWRY--QQALYNNDSDLPEGYYPGVYLK---------------------------HVGK 211
            F RY  ++AL  +    P  +   VY+K                            V  
Sbjct: 222 -FERYGSEEALLKD----PINHLFDVYVKINKDMAVQEGPIKELRETIKQKKEKNEDVSA 276

Query: 212 ELAD--KYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIF 259
           E A+  K      +    ++   ++D   +A+          ++  +     LNI  D++
Sbjct: 277 EEAELSKLVDASDDEKARRYFKSMEDGDPKALALWKRFRDLSIEKYKQIYARLNIDFDVY 336

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E       P  ++   + + + G          KS+     D       F        
Sbjct: 337 SGESQV---LPESLKKAYETMEKSG-------VSEKSEGAVIVD-------FTKHKFKKL 379

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               +++ DG+  Y   D+     ++++  FD MIYV+ +    ++ +L  V   +  K 
Sbjct: 380 GKAIVIRKDGTPLYLTRDIGAIVERHDKYQFDKMIYVVANQQDLHLAQLFKVTELMGHKD 439

Query: 379 --AQINVLLCELV-----------------RLYRDGMPIKMSKRAGDFITLRHVV---DE 416
              +   +   +V                 R   D M   M +    ++ +   +   D 
Sbjct: 440 IADKCQHINFGMVRGMSTRKGTVKFLDDILRDVADKMHEVMKRNEDKYVQVDDPLATSDT 499

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G  +V    +  K     DF+   +    + +   Y+QYA+AR  SI R+A+    DL 
Sbjct: 500 LGITAVMVQDMSGKRVNGYDFNLEAMTSF-EGDTGPYLQYAHARLSSIIRKAEINPEDLP 558

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                          +   + L  +LA++P V+ N     EP  +  YL+ +  +    +
Sbjct: 559 KADLS-------ILTEQHAIDLARYLAQWPDVVLNTVKTLEPTTVLTYLFRMTHMLSSSY 611

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              R       +     K+ + R+ L  +   ++ +G+ ++G+     M
Sbjct: 612 DILR-------IVGREEKVALARMALYASARQVLYNGMKLLGLNPVERM 653


>gi|326469809|gb|EGD93818.1| arginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326485237|gb|EGE09247.1| arginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 646

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 114/657 (17%), Positives = 218/657 (33%), Gaps = 131/657 (19%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +    +       I        G L     A+ +    G  P  IA  I A
Sbjct: 38  RAHIAELVAEASGLEPAFVYTKILWTNMLEKGDLILPVPALQIK---GKKPQEIAADIAA 94

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL----------IGKG 120
           +      ++   + G      Y        ++ SI+ +   YG N               
Sbjct: 95  KFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPNVGLRDQRDASKGK 154

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+ D G Q   LA  
Sbjct: 155 KKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYLGDWGKQYGLLASG 214

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKELADKYSS------- 219
              +  ++ L  +    P  +   VY             +K + +++  K          
Sbjct: 215 YEKYGSEEELLKD----PINHLFEVYVKINQDVGAQEGPIKELKEQIKAKKEKNEDVTEL 270

Query: 220 --------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                               + +   +EK L + + +   ++ K  +     LNI  D++
Sbjct: 271 EKQLEPLVDASYDEKARRYFKSMEDGDEKALELWRRFRDLSIEKY-KQTYARLNIDFDVY 329

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E              ++N                       +     ++      G  
Sbjct: 330 SGESQVKDESIKNSYKAMEN-------------------AGVSESSEGAVIIDFAKHGAK 370

Query: 320 V--DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 +++ DG+  Y   D+A    +  E  FD MIYV+ +    ++ +L      V +
Sbjct: 371 KLGKAIVIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGK 430

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM----------- 425
           K       L         GM   MS R G    L  ++ +VG      M           
Sbjct: 431 KD------LANRCEHISFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMQKNQAKYEQIE 484

Query: 426 -----------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                             +  K     +F+   +    + +   Y+QYA+AR  S+ R+A
Sbjct: 485 DPVATADILGITSVMVQDMSGKRINGYEFNLENMTSF-EGDTGPYLQYAHARVCSVTRKA 543

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           +    +L                ++  + L+  LA++P V+ NA+   EP  +  YL+ +
Sbjct: 544 EIKPEELGSADLSL-------LTESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 596

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +    +   +       V  +  ++ M R+ L  +   ++++G+ ++G+     M
Sbjct: 597 THMLSSGYDVLK-------VVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKRM 646


>gi|159129792|gb|EDP54906.1| arginyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 667

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 108/662 (16%), Positives = 216/662 (32%), Gaps = 138/662 (20%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +   +   L          +K+  ++      D   G L      +    +  +P  + +
Sbjct: 38  YRVHIAEKLGA--AAGIEPEKLYPKLQWTNTLDK--GDLVLPVPSL---QIKKNPQELCK 90

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLY----LSPSYLRKILSSIVV------SGIEYGRNL 116
            +  +      V      G      +    L+ + + +IL            G+    + 
Sbjct: 91  ELAEKFHESDLVAPPVPFGVHLQFFFKPEPLTKTVISRILKEKAAFGTNGNQGLRDPSDP 150

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   
Sbjct: 151 SKGKKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGL 210

Query: 177 LALSVFWRYQQALYNNDSDL---PEGYYPGVY-------------LKHVGKELADKYSS- 219
           LA           + N+ +L   P  +   VY             +K + +++  K    
Sbjct: 211 LANGF------KRFGNEEELLKNPINHLFDVYVKINQIVAQQEGPIKELKEQIKAKKEKN 264

Query: 220 --------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                                     + +   +E+ L + + +   ++ K  +     LN
Sbjct: 265 EDVSVLEAELAKLVDVSEDEKARRYFKSMEDGDEEALALWRRFRDLSIEKY-KQTYARLN 323

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I  D++  E        +   + ++                    T   +     ++   
Sbjct: 324 IDFDVYSGESQIKNESMTAAYETMEK-------------------TGVSEKSEGAVIVDF 364

Query: 314 TMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV 370
           T  G        +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +
Sbjct: 365 TKHGAKKLGKAIIVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKI 424

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------- 417
              +  K       L    +    GM   MS R G    L  ++ +V             
Sbjct: 425 TELMGRKD------LASRCQHINFGMVRGMSTRKGTVKFLDDILRDVADKMHEVMKGNAE 478

Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                          G  SV    +  K     DF+   +    + +   Y+QYA+AR  
Sbjct: 479 KYAQVENPEETADILGLTSVMVQDMTGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLC 537

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI R++     +LD           +   +   + L+  LA +P V+ N T   EP  + 
Sbjct: 538 SIVRKSGLNVEELDSANL-------DLLTEPHAVDLVRLLATWPDVLLNTTKTLEPTTIL 590

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ +  +    +   +       V  +  +L   R+ L  A   ++++G+ ++G+   
Sbjct: 591 TYLFRMTHILSSSYDVLK-------VVGSEPELKKARMALYEAARQVLHNGMRVLGLSPV 643

Query: 583 NE 584
             
Sbjct: 644 ER 645


>gi|55980067|ref|YP_143364.1| arginyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|81364722|sp|Q5SM45|SYR_THET8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|17942832|pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase
 gi|14275785|emb|CAC39622.1| arginyl-tRNA synthetase [Thermus thermophilus]
 gi|55771480|dbj|BAD69921.1| arginyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 592

 Score =  296 bits (759), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 128/631 (20%), Positives = 239/631 (37%), Gaps = 96/631 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  L+E   +   E  +  R+ + R      G         L++ L   P  IA+ +  
Sbjct: 2   LRRALEEAIAQALKEMGVPVRLKVARAPKDKPGDYGVPL-FALAKELRKPPQAIAQELKD 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           R+ +   V+     G G++N  L    L       +   +        +   V +E  S 
Sbjct: 61  RLPLPEFVEEAVPVG-GYLNFRLRTEAL-------LREALRPKAPFPRRPGVVLVEHTSV 112

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NP   +HVGH R   +GD +A ++A++G EV    YI+D G Q    A ++F      L 
Sbjct: 113 NPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQ---AAETLFALRHYGLT 169

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            +  +  + +    Y++       ++    +           +++  V  ++      + 
Sbjct: 170 WDGKEKYDHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGELREE-VNRILLAQMATMH 228

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           ALN ++D+ + E D  R     ++  +  L +  +V+     P + K      MD   ++
Sbjct: 229 ALNARYDLLVWESDIVR--AGLLQKALALLEQSPHVFR----PREGKYAGALVMDASPVI 282

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-------------------------- 344
                  +D    LL+S+G+ TY+A D+A+   K                          
Sbjct: 283 ----PGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPE 338

Query: 345 ---YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIK 399
              Y    +  I V+    S     + A  A         + + L  E V L       +
Sbjct: 339 GEAYTPKAEETINVVDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLL----EGRQ 394

Query: 400 MSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSEL 434
           MS R G  +++  V++E                         V   ++RF M+  +  + 
Sbjct: 395 MSGRKGLAVSVDEVLEEATRRARAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQ 454

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +DF + +     + +   YVQYA+AR  SI R+A +               P  S+    
Sbjct: 455 IDFRYQEALSF-EGDTGPYVQYAHARAHSILRKAGEWG------------APDLSQATPY 501

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L + L ++   +  A   + P+ LA YL DLA+ ++ +++          V      
Sbjct: 502 ERALALDLLDFEEAVLEAAEERTPHVLAQYLLDLAASWNAYYNARENGQPATPVLTAPEG 561

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  +RL LV ++   + +GL+++G+ +P  M
Sbjct: 562 LRELRLSLVQSLQRTLATGLDLLGIPAPEVM 592


>gi|116208750|ref|XP_001230184.1| arginyl-tRNA synthetase [Chaetomium globosum CBS 148.51]
 gi|88184265|gb|EAQ91733.1| arginyl-tRNA synthetase [Chaetomium globosum CBS 148.51]
          Length = 633

 Score =  296 bits (758), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 125/645 (19%), Positives = 244/645 (37%), Gaps = 100/645 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +  F  + + + N L  I     VE KI+    +        G L   AA  L R  G  
Sbjct: 28  LNPFDFYRAHIANILSGIS---GVEPKIIFS-ALSWTASLDKGDL-ILAAPAL-RVKGQK 81

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-----------SG 109
           P  +A+    +   +  +         F+  +L P+ + + +  ++            +G
Sbjct: 82  PDELAKQWSEKFPDNDPLFEKPTVVNYFMAFFLKPAPVVETVIPLIQKHGAQFGCNKFNG 141

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           ++  ++      ++ +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+ D
Sbjct: 142 LKDPKDPSKGHKRMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYQGAGWDVIRINYLGD 201

Query: 170 AGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----------- 217
            G Q   LAL+   +  ++AL  +    P  +   +Y++   +  A+K            
Sbjct: 202 WGKQYGLLALAFEKYGDEEALTKD----PINHLFQLYVRINSEMTAEKEQIEKRKQDGED 257

Query: 218 ----SSELLNFPEEKWLPIVKDYSVQAMMKIIR----------DDLKALNIQHDIFISED 263
                +  L+    ++   + D    A+ +  R          D    LNI+ D +  E 
Sbjct: 258 VTELEANSLDEQARRYFKKMTDRDPVALAQWKRFRDLSITRYQDTYARLNIKFDEYSGES 317

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                         D + + G   +      + K     D             G  +++P
Sbjct: 318 QVSE----------DMMEKIGQEMQNKGISKEDKGAMIVDFQA----LVPGKEGKRLEKP 363

Query: 324 LLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE----- 376
           ++K  DG+  Y   D++    ++E+  FD+MIYV+ S    ++K+L  +   +       
Sbjct: 364 IVKKRDGTALYLTRDISELLGRHEKYKFDHMIYVVASAQDLHLKQLFKIIELLGHNEIAS 423

Query: 377 KKAQINV--------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419
           K   IN                L +++R   D M   M K    +  + +     D +G 
Sbjct: 424 KCQHINFGLVLGMSTRKGTVKFLDDILRDVADKMHETMKKNETKYSQVENPDATADTLGI 483

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            SV    +  K      F+   +    + +   Y+QYA+AR  SI R+A+    D +   
Sbjct: 484 SSVMVQDMTGKRINNYTFNMDAMTSF-EGDTGPYLQYAHARVSSIRRRAE--LSDAEIAS 540

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +++      +T  + ++  LA +P  ++N     EP  +  YL+ +       + H 
Sbjct: 541 ADLSLLT-----ETHAVNIVRLLALWPDTVQNTLRTLEPTTVLTYLFKMTHALSSSYDHL 595

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +       V  + R+L   R+ L  A  +++ +G+ ++G+     
Sbjct: 596 Q-------VVGSERELMKARMALYDAAHTVLGNGMRLLGLSPVER 633


>gi|226286772|gb|EEH42285.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 720

 Score =  296 bits (758), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 112/658 (17%), Positives = 219/658 (33%), Gaps = 135/658 (20%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +            ++       G L     A+ +       P  +A+ I+ 
Sbjct: 113 RAHIAELVAEALGVDSQTVYPRLQWTNSLDKGDLVLAAPALQI--KGKKPPEVVAQ-ILE 169

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
            +     +++    G   I  +  P  L K +   +             G+    +    
Sbjct: 170 NLTPSDLINTPIAVGTH-IQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKG 228

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA 
Sbjct: 229 KKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVIKMNYLGDWGKQYGLLAN 288

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSS----------------- 219
                     Y N+ +L   P  +   VY+K + K++A++                    
Sbjct: 289 GY------EKYGNEEELVKDPINHLFDVYVK-INKDVAEQEGPIKELREQIKAKKDKDED 341

Query: 220 ------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                                   + +   +EK L + + +   ++ K  ++    LNI 
Sbjct: 342 ITVLEKVLQAKIDVSYDEMARRYFKSMEDGDEKALALWQRFRDLSIEKY-KETYARLNIG 400

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D +  E       P  +    + + + G                      K +      
Sbjct: 401 FDCYSGESQV---KPESLAKAYEAMEKTGVSENSEGAVIVDFAKHDAKKLGKAI------ 451

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
                   +++ DG+  Y   D+A    +  E  FD MIYV+ +    ++ +L  V   V
Sbjct: 452 --------VIRKDGTPLYLTRDIAAIIERDEEYHFDKMIYVVAAQQDLHLAQLFKVTELV 503

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD--------SVRF-- 424
             K       L +  +    GM   MS R G    L  ++ +VG          + ++  
Sbjct: 504 GRKD------LADRCQHVNFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMKKNATKYEQ 557

Query: 425 ------------------MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                               +  K     +F+   +    + +   Y+QYA+AR  S+ R
Sbjct: 558 VEDPEKTADILGITSVMVQDMSGKRINGYEFNLDVMTSF-EGDTGPYLQYAHARLCSMTR 616

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +A       D D             +   + LI  LA +P V+ N T   EP  +  YL+
Sbjct: 617 KA-------DVDPSELTTANLSLLTEPHAIDLIRLLAVWPDVVFNTTKTLEPTTILTYLF 669

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +  V    +   +       V  +  ++   R+ +      ++++G+ ++G+   + 
Sbjct: 670 RMTHVLSSGYDVLK-------VVGSEPEVKKARMAMYDCARQVLSNGMRLLGLNPVDR 720


>gi|111115422|ref|YP_710040.1| arginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263411|ref|ZP_03435406.1| arginyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|123145673|sp|Q0SMR4|SYR_BORAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|110890696|gb|ABH01864.1| arginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215980255|gb|EEC21076.1| arginyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 585

 Score =  296 bits (758), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 120/614 (19%), Positives = 228/614 (37%), Gaps = 72/614 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59
           +  +    +K+ +  I   + + K I LD I I  ++P     G +S      LS+ L L
Sbjct: 1   MTKNVKKNIKDEINIIVTNLALSKNIKLDEININIQKPPKSDLGDISI-LIFELSKTLKL 59

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIG 118
              TI+E I+  +K       +   G  ++N+ +    Y+   +  +      YG +   
Sbjct: 60  PIETISEEIIKALKAKY---EIKAMGP-YLNIKIPRKEYIHNTIQMVNAQKDTYGTSKYL 115

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++ +   IND G  I    
Sbjct: 116 DNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKIIKLNLINDRGVHICKSM 175

Query: 179 LSVFWRY-----QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LP 231
           L+          ++A    D  + + Y          +   ++    LL + ++    + 
Sbjct: 176 LAYKKFGNEITPEKAFKKGDHFIGDFYVQYNKYAQENENAEEEIQDLLLKWEQKDASTIE 235

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + K  +  A+ + I++  K  N   D    E +      + + + +     +G+ Y+   
Sbjct: 236 LWKKLNNWAI-EGIKETYKITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYKRED 290

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFD 350
                      D      +           + L++S+G+  Y   DL     +  E  F+
Sbjct: 291 GAICIDLPLDSDEKTDTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRIKEFNFE 341

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            MIYV+GS+   + K L  V+  +   K +    L   +    DG   KM  R G+ I  
Sbjct: 342 EMIYVVGSEQIQHFKNLFFVSEKLGISKNKKLFHLSHGMVNLVDG---KMKSREGNVIDG 398

Query: 411 RHVV-------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
            +++                          ++   ++ + +L     + + F+  K    
Sbjct: 399 DNLILDLMESILPEITQKIENKENAKKNALDIALGAIHYYLLKSAIHKDIVFN-KKESLS 457

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N   Y+QY  AR  SI  +           +     I  E      E  +I  ++E 
Sbjct: 458 FTGNSGPYIQYVGARINSILEKYN------TLSIPIIKKINFELLEHEKEWDIIKIISEL 511

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              I  A     P  L  Y Y LA  F  ++        +R +  NN  LT  R++ + A
Sbjct: 512 EENIIKAAKDLNPSILTSYSYSLAKHFSAYYQ------EVRVIDINNIDLTAARIEFLKA 565

Query: 566 VASIINSGLNIIGV 579
           +   I + + ++ +
Sbjct: 566 ILQTIKNCMYLLNI 579


>gi|83769499|dbj|BAE59634.1| unnamed protein product [Aspergillus oryzae]
          Length = 651

 Score =  296 bits (757), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 114/654 (17%), Positives = 217/654 (33%), Gaps = 121/654 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIA 65
           +   +   L          +KI  R+      D   G L     A+ +    G  P  + 
Sbjct: 38  YREHIAEKLGA--ATGIDSEKIYTRLQWSSTLDK--GDLLLPVPALGIK---GKKPQELC 90

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLY----LSPSYLRKILSSIVV------SGIEYGRN 115
           E +  +      V      G   +  +    L+ + + +IL            G+    +
Sbjct: 91  EELAQKFPESDLVLPPTCVGIHLVFFFKPQPLTHTVVSRILKEKAAYGTNGNQGLRDPSD 150

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q  
Sbjct: 151 PSKGQKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYG 210

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL-ADKYSSEL 221
            LA        +   N D   P  +   VY             +K + +++ A K  +E 
Sbjct: 211 LLANGYKQFGSEEALNKD---PINHLFDVYVKINNVVAQQEGPIKELKEQIKAKKEKNED 267

Query: 222 LNFPE--------------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           ++  E                          E+ L + + +   ++ K  R     LNI 
Sbjct: 268 VSELEQELQKLVDASEDESARRYFKSMEDGNEEALGLWRRFRDLSIQKY-RQTYARLNID 326

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++  E        +   + ++                        +     ++   T 
Sbjct: 327 FDVYSGESQIKNESMTAAYETMEK-------------------AGVSEKSEGAVIVDFTK 367

Query: 316 VGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAA 372
            G        +++ DG+  Y   D+     + E   FD MIYV+      ++ +L  +  
Sbjct: 368 HGAKKLGKAIIIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITE 427

Query: 373 AVSEKK--AQINVLLCELVR-----------------LYRDGMPIKMSKRAGDF---ITL 410
            +  K   ++   +   +VR                   RD M   M K    +      
Sbjct: 428 LMGHKDLASRCQHVNFGMVRGMSTRKGTVKFLDDILGDVRDKMHEVMKKNEEKYQQVENP 487

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
               D +G  SV    +  K     DF+   +    + +   Y+QYA+AR  SI R+++ 
Sbjct: 488 EETADILGITSVMVQDMSGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLCSIIRKSE- 545

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                  ++        +   +T    L   LA++P V+ N T   EP  +  YL+ +  
Sbjct: 546 ------LNVEELGSANLDLLTETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMTH 599

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                +   +       V  +  +L   R+ L  +   ++ +G+ ++G+   + 
Sbjct: 600 TLSSSYEVLK-------VVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSR 646


>gi|119481669|ref|XP_001260863.1| arginyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119409017|gb|EAW18966.1| arginyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 664

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 107/663 (16%), Positives = 217/663 (32%), Gaps = 128/663 (19%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           +     +   +   L          +K+  ++      D   G L      +    +  +
Sbjct: 32  LNPVDAYRVHIAEKLGA--AAGIEPEKLYPKLQWTNTLDK--GDLVLPVPSL---QIKKN 84

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-----------VSG 109
           P  + + +  +      V      G   +  +  P  L K + S +             G
Sbjct: 85  PQELCKELAEKFPESDLVAPPVPFGVH-LQFFFKPEPLTKTVISRILKEKATFGTNGNQG 143

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           +    +      ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D
Sbjct: 144 LRDPADPSKGKKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGD 203

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVY-------------LKHVGKEL 213
            G Q   LA           + N+ +L   P  +   VY             +K + +++
Sbjct: 204 WGKQYGLLANGF------KRFGNEEELLKNPINHLFDVYVKINQIVAQQEGPIKELKEQI 257

Query: 214 ADKYSS---------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             K                              + +   +++ L + + +   ++ K  +
Sbjct: 258 KAKKEKNEDVSVLEAELAKLVDVSEDEKARRYFKSMEDGDQEALALWRRFRDLSIEKY-K 316

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                LNI  D++  E        +   + ++                        +   
Sbjct: 317 QTYARLNIDFDVYSGESQIKNESMTAAYEAMEK-------------------AGVSEKSE 357

Query: 307 KQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
             ++   T  G        +++ DG+  Y   D+     + E   FD MIYV+ +    +
Sbjct: 358 GAVIVDFTKHGAKKLGKAIIVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLH 417

Query: 364 VKRLEAVAAAVSEKKA-----QINV--------------LLCELVRLYRDGMPIKMSKRA 404
           + +L  +   +  K        IN                L +++R   D M   M   A
Sbjct: 418 LAQLFKITELMGRKDVASRCQHINFGMVRGMSTRKGTVKFLDDILRDVADKMHEVMKGNA 477

Query: 405 GDFI---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             +          D +G  SV    +  K     DF+   +    + +   Y+QYA+AR 
Sbjct: 478 EKYAQVENPEETADILGLTSVMVQDMTGKRINGYDFNLDAMTSF-EGDTGPYLQYAHARL 536

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R++     +LD           +   +   + L+  LA +P V+ N T   EP  +
Sbjct: 537 CSIVRKSGLNVEELDSANL-------DLLTEPHAVDLVRLLATWPDVLLNTTKTLEPTTI 589

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL+ +  +    +   +       V  +  +L   R+ L  A   ++++G+ ++G+  
Sbjct: 590 LTYLFRMTHILSSSYDVLK-------VVGSEPELKKARMALYEAARQVLHNGMRVLGLSP 642

Query: 582 PNE 584
              
Sbjct: 643 VER 645


>gi|327303838|ref|XP_003236611.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326461953|gb|EGD87406.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 646

 Score =  296 bits (757), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 116/655 (17%), Positives = 226/655 (34%), Gaps = 127/655 (19%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +    +       I        G L     A+ +    G  P  IA  I A
Sbjct: 38  RAHIAELVAEASGLEPAFVYTKILWTNMLDKGDLILPVPALQIK---GKKPQEIAADIAA 94

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL----------IGKG 120
           +      ++   + G      Y        ++ SI+ +   YG N               
Sbjct: 95  KFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPNVGLRDQRDASKGK 154

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+ D G Q   LA  
Sbjct: 155 KKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYLGDWGKQYGLLASG 214

Query: 181 V-FWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKELADKYSS------- 219
              +  ++ L  +    P  +   VY             +K + +++  K          
Sbjct: 215 YEKYGSEEELLKD----PINHLFEVYVKINQDVAAQEGPIKELKEQIKAKKEKNEDVTEL 270

Query: 220 --------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                               + +   +EK L + + +   ++ K  +     LNI  D++
Sbjct: 271 EKRLEPLVDASYDEKARRYFKSMEDGDEKALELWRRFRDLSIEKY-KQTYARLNIDFDVY 329

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E          ++D  +++       E       S+     D  +      +  +G  
Sbjct: 330 SGESQ--------VKD--ESIKNSYKAMESAGVSESSEGAVIIDFAKHG----AKKLGKA 375

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           +   +++ DG+  Y   D+A    +  E  FD MIYV+ +    ++ +L      V +K 
Sbjct: 376 I---VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKD 432

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM------------- 425
                 L         GM   MS R G    L  ++ +VG      M             
Sbjct: 433 ------LANRCEHISFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMQKNQAKYEQIEDP 486

Query: 426 ---------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                           +  K     +F+   +    + +   Y+QYA+AR  S+ R+A+ 
Sbjct: 487 VATADVLGITSVMVQDMSGKRINGYEFNLENMTSF-EGDTGPYLQYAHARVCSVTRKAEI 545

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              +L                ++  + L+  LA++P V+ NA+   EP  +  YL+ +  
Sbjct: 546 NPEELGSADLSL-------LTESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRMTH 598

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +    +   +       V  +  ++ M R+ L  +   ++++G+ ++G+     M
Sbjct: 599 MLSSGYDVLK-------VVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKRM 646


>gi|171685240|ref|XP_001907561.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942581|emb|CAP68233.1| unnamed protein product [Podospora anserina S mat+]
          Length = 634

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/643 (19%), Positives = 226/643 (35%), Gaps = 104/643 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIA 65
           + + L N L E+     V+K I+    +   +    G L     A+ L +  G  P  I 
Sbjct: 32  YRAHLANVLTEVT---GVDKNII-YPALSWTQSLDKGDLVLAAPALRLPKG-GPKPDQIV 86

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGR 114
           +   A+   +  +         F++ +   + L   +   ++            G++  +
Sbjct: 87  QDWAAKFPENDPLFEKPHVHSYFMSFFFKGAPLVNSILPTILQKGKTFGTNPSLGLKDPK 146

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
                  K+ +EF S N   P H GH R  ++G  L +L   +G++VTR  Y+ D G Q 
Sbjct: 147 EPSAGRKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLGNLYEGAGWDVTRINYLGDWGKQY 206

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSS 219
             LAL+      +     D   P  +   +Y++                   E   +  +
Sbjct: 207 GLLALAFEKFGDEKALEQD---PINHLFQLYVRINTEMTEEKEQIAKRKEAGEDVTEAEA 263

Query: 220 ELLNFPEEKWLPIV--KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGD 269
             L+    ++   +  +D    AM K  RD            LNI  D +  E      D
Sbjct: 264 NSLDEQARRYFKKMTDRDEKALAMWKKFRDLSIVRYKQTYARLNIHFDEYSGESQVSEAD 323

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-D 328
              + DI   L  +           +    Q  D             G  +++PL++  D
Sbjct: 324 ---MADIGKQLEEK-------KISKEDNGAQLIDFSE----LVPGKEGKRLEKPLVRKRD 369

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINV-- 383
           G+  Y   D++    ++ +  FD MIYV+ S    ++K+L  +   +  K    +     
Sbjct: 370 GTALYLTRDISELLARHAKYNFDKMIYVVASAQDLHLKQLFKIIELLGHKDIADKCQHIN 429

Query: 384 ---------------LLCELVRLYRDGMPIKMSKRAGDF---ITLRHVVDEVGSDSVRFM 425
                           L +++R   D M   M K    +        V D +G  SV   
Sbjct: 430 FGLVLGMSTRKGTVKFLDDILRDVADKMHETMRKNEDKYNQVENPEAVADVLGISSVMVQ 489

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPR 482
            +  K      F+  ++    + +   Y+QYA+AR  SI R+A    +     DF L   
Sbjct: 490 DMTGKRINNYTFNMDQMTSF-EGDTGPYLQYAHARVCSIKRKAGLSDEEIASADFSLLT- 547

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    +   + ++  LA++P V  N     EP  +  YL+ +       +   R  
Sbjct: 548 ---------EAHAVNIVRLLAQWPDVFSNTLRTLEPTTVLAYLFKMTHALSSSYDVLR-- 596

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +  +   +   R+ L  A   ++ +G+ ++G+     M
Sbjct: 597 -----IMGSEPAVLKARMALYEAAHIVLGNGMRLLGLSPVERM 634


>gi|315051012|ref|XP_003174880.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340195|gb|EFQ99397.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 645

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 118/650 (18%), Positives = 225/650 (34%), Gaps = 119/650 (18%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +    +       I        G L     A+ +    G  P  IA  I A
Sbjct: 38  RAHIAELVAEASGLEPAFVYTKILWTNMLEKGDLILPVPALQIK---GKKPQEIAADIAA 94

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL----------IGKG 120
           +      V+   + G      Y        ++ SI+ +   YG N               
Sbjct: 95  KFPKSDLVEPPVVVGAHLQFFYSHKPMTENVIRSILANKDAYGSNPNVGLRDQRDASKGK 154

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+ D G Q   LA  
Sbjct: 155 KKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTVLGWEVLKINYLGDWGKQYGLLANG 214

Query: 181 V--FWRYQQALYNNDSDLPEGYYPGVY--------LKHVGKELADKYSS----------- 219
              + R ++ L +  + L E Y             +K + +++  K              
Sbjct: 215 YEKYGREEELLKDPINHLFEVYVKINQDVSAQEGPIKELKEQIKAKKEKNEDVTELEKQL 274

Query: 220 ----------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                           + +   ++K L + + +   ++ K  +     LNI  D++  E 
Sbjct: 275 EPLVDASYDEKARRYFKSMEDGDQKALDLWRRFRDLSIEKY-KQTYARLNIDFDVYSGES 333

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                    ++D  +++       E       S+     D  +      +  +G  +   
Sbjct: 334 Q--------VKD--ESIKNSYKAMESAGVSESSEGAVIIDFAKH----SAKKLGKAI--- 376

Query: 324 LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           +++ DG+  Y   D+A    +  E  FD MIYV+ +    ++ +L      V +K     
Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYKFDKMIYVVAAQQELHLAQLFKTTELVGKKD---- 432

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM----------------- 425
             L         GM   MS R G    L  ++ +VG      M                 
Sbjct: 433 --LASRCEHISFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMQKNQTKYEQIEDPVATA 490

Query: 426 -----------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
                       +  K     +F+   +    + +   Y+QYA+AR  S+ R+A+    +
Sbjct: 491 DVLGITSVMVQDMSGKRINGYEFNLENMTSF-EGDTGPYLQYAHARVCSVTRKAEIKPEE 549

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L                ++  + LI  LA++P V+ NA+   EP  +  YL+ +      
Sbjct: 550 LGGADLSL-------LTESHAIDLIRLLAQWPDVVFNASKTLEPCTILTYLFRMTHTLSS 602

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +   +       V  +  ++ M R+ L  +   ++++G+ ++G+     
Sbjct: 603 GYDVLK-------VVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKR 645


>gi|161528194|ref|YP_001582020.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339495|gb|ABX12582.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 628

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/669 (18%), Positives = 246/669 (36%), Gaps = 130/669 (19%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F      ++N L +I   + +      +  +E P     G +S+N + +L++ L   P  
Sbjct: 3   FKSILDEIENNLNKILDDLSISDV---KFSVE-PAKPGFGDVSSNVSFLLAKQLKKSPKE 58

Query: 64  IAELIVARIKI--DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           I+E++  +        V        G++N Y     L +++ S   +  E+G   IGK +
Sbjct: 59  ISEMLSEKYSQCVSTLVSKSESHPSGYLNFYADWPKLNQLILSE-SNLPEFGDVDIGKNS 117

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +E  S NP   +H+GH R  ++GDT++ ++  + Y+V    Y++D+G Q+  + +  
Sbjct: 118 TIVVEHTSVNPNKALHIGHIRNIIIGDTISRILQKANYKVNVLNYVDDSGLQVADIIVGF 177

Query: 182 FWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLP 231
                   +    + P+     +Y G  +     E  +      +    +L   E+    
Sbjct: 178 ------KHFGYPIEPPQGKKFDHYCGDDVYVKTTEKYEQDSSLEEIRKNVLKELEDGTSE 231

Query: 232 I--VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                D   + ++    +    L + +D    E    R        I + L     V   
Sbjct: 232 TAQFADKITRRVLSNQLETCWNLAVSYDCLNFESQIIR--SGLWDGIFEKLKEMNLV--- 286

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY--------- 340
                     +    +    + R    G + D+ +++S+G+ TY A D+ Y         
Sbjct: 287 --------EFENDGKNAGCWVIRGE--GKEEDKVIVRSNGTATYIAKDIPYAAWKLGLLD 336

Query: 341 ---FKCKYER---------------------GF--DNMIYVMGSDHS----------GYV 364
                 KYE+                      F  D +I V+ S  +          G  
Sbjct: 337 DPFHYEKYEKEQPNSRVLWQTILNDGASESQNFSGDKVITVIDSRQARLQKIITSLMGKF 396

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------- 415
           K +      +  +   ++    +++ L  DG   +MS R G ++    V D         
Sbjct: 397 KSIPDAYVHLGYESVTLSSDTAKILGLETDGKQAQMSGRKGLYVNADSVYDLLKEKTTEE 456

Query: 416 ------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                              V   ++R+ M+ +   +++ FD  K     + +   Y+QY 
Sbjct: 457 TKKRHPEMDDSEIEKISHSVSVATLRYEMIKQDLDKIIAFDLTKSLSL-EGDTAPYIQYT 515

Query: 458 YARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +AR   I  ++      D+DF L            + SE+ L+  +  +   + +A    
Sbjct: 516 HARASRILEKSGRTPSIDVDFSLLK----------EQSEIDLVKMIGLFNLQVRDAANNL 565

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P  ++ Y +DLA  F+  +         + +   + KL   RL LV++    I   LN+
Sbjct: 566 SPKVISRYCHDLAVTFNSFYEKS------KVLDLGDEKLENSRLCLVNSFKITIEKALNL 619

Query: 577 IGVESPNEM 585
           +G+ +P++M
Sbjct: 620 LGISAPDKM 628


>gi|296812237|ref|XP_002846456.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238841712|gb|EEQ31374.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 645

 Score =  295 bits (755), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 111/660 (16%), Positives = 221/660 (33%), Gaps = 139/660 (21%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNA-AMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +    +       I        G L     A+ +    G  P  IA  I +
Sbjct: 38  RAHIAELVAEASGLEPAFVYTKILWTNMLEKGDLILPVPALQIK---GKKPQEIAADIAS 94

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
           +      V+   + G   +  + S   L + +   ++            G++  ++    
Sbjct: 95  KFPKSDLVEPPVVVGAH-LQFFFSHKPLTEYVIRSILENKDAYGSNANVGLQDQKDPSKG 153

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV +EF S N   P H GH R  ++G  +A+L    G++V +  Y+ D G Q   LA 
Sbjct: 154 KKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTVLGWDVLKINYLGDWGKQYGLLAN 213

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVY-------------LKHVGKELADKYSS---- 219
                     Y ++ DL   P  +   VY             +K + +++  K       
Sbjct: 214 GY------EKYGSEEDLLKDPINHLFEVYVKINKDVAEQEGPIKELKEQIKAKKEKNEDV 267

Query: 220 -----------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                                  + +   +EK L + + +   ++ K  ++    LNI  
Sbjct: 268 TELEKQLEPLVDASYDEKARRYFKSMEDGDEKALALWRRFRDLSIEKY-KETYARLNIDF 326

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++  E              +++          ++     +  +K               
Sbjct: 327 DVYSGESQVKEESLKNSYKAMESSGVSESSEGAVIIDFAKQGAKKLGKA----------- 375

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                  +++ DG+  Y   D+A    + ++  FD MIYV+ +    ++ +L      V 
Sbjct: 376 ------IVIRKDGTPLYLTRDIAAIVERDDKYHFDKMIYVVAAQQELHLAQLFKTTELVG 429

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM---------- 425
           +K       L         GM   MS R G    L  ++ +VG      M          
Sbjct: 430 KKD------LASRCEHVSFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMQKNPAKYEQI 483

Query: 426 ------------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                              +  K     +F+   +    + +   Y+QYA+AR  S+ R+
Sbjct: 484 EDPVATADVLGITSVMVQDMSGKRINGYEFNLENMTSF-EGDTGPYLQYAHARVCSVTRK 542

Query: 468 AK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           A+   +   D D  L   +            + LI  LA++P V+ NA+   EP  +  Y
Sbjct: 543 AEIKPEELGDADLSLLTES----------HAIDLIRLLAQWPDVVFNASKTLEPCTILTY 592

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L+ +       +   +       V  +   +   R+ L  +   ++++G+ ++G+     
Sbjct: 593 LFRMTHTLSSGYDVLK-------VVGSEPGVKKARMALYESARQVLHNGMRLLGLNPVQR 645


>gi|121716278|ref|XP_001275748.1| arginyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119403905|gb|EAW14322.1| arginyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 733

 Score =  295 bits (755), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 113/662 (17%), Positives = 212/662 (32%), Gaps = 138/662 (20%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +   +   L          +KI  ++      D   G L      +    +  +P  + +
Sbjct: 38  YREHIAEKLGA--ATGIEPEKIYTKLQWTNTLDK--GDLLLPVPSL---QIKKNPQELCK 90

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRN 115
            +  +      V      G   +  +  P  L + +   ++            G++   +
Sbjct: 91  ELAEKFPESDLVSPPVAFGVH-LQFFFKPGPLTQTVVPRILKEKATFGTNGNMGLQDPSD 149

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q  
Sbjct: 150 PSKGKKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYG 209

Query: 176 TLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK------------------------- 207
            LA          L+ N+ +L   P  +   VY+K                         
Sbjct: 210 LLANGF------KLFGNEEELLKNPINHLFDVYVKINQIVGQQEGPIKELKEQIKAKKEK 263

Query: 208 -HVGKELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRD--------DLKALN 253
                EL  + +  +    +EK     K     D    A+ +  RD            LN
Sbjct: 264 SEDVSELEAELAKLVDVSEDEKARRYFKSMEDGDQDALALWRRFRDLSIEKYKQTYARLN 323

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I  D++  E        +     ++                        +     ++   
Sbjct: 324 IDFDVYSGESQIKNESMTAAYQSMEK-------------------AGVSEKSEGAVIVDF 364

Query: 314 TMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV 370
           T  G        +++ DG+  Y   D+     + E   FD MIYV+ +    ++ +L  +
Sbjct: 365 TKHGAKKLGKAIIVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKI 424

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------- 417
              +  K       L    +    GM   MS R G    L  ++ +V             
Sbjct: 425 TELMGHKD------LASRCQHINFGMVRGMSTRKGTVKFLDDILRDVADKMHEVMKKNQE 478

Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                          G  SV    +  K     DF+   +    + +   Y+QYA+AR  
Sbjct: 479 KYDQVENPEAVADILGLTSVMVQDMTGKRINGYDFNLEAMTSF-EGDTGPYLQYAHARLC 537

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           S+ R++     +LD               +T    LI  LA +P V+ N T   EP  + 
Sbjct: 538 SMGRKSGLSVEELDSANLDL-------LTETHATDLIRLLATWPDVLLNTTKTLEPTTII 590

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL+ +  +    +   +       V  +  ++   R+ L  A   ++++G+ ++G+   
Sbjct: 591 NYLFRMTHILSSGYDSLK-------VVGSEPEVKKARMALYAAARQVLHNGMRVLGLSPV 643

Query: 583 NE 584
             
Sbjct: 644 ER 645


>gi|305663765|ref|YP_003860053.1| arginyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378334|gb|ADM28173.1| arginyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 640

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/648 (22%), Positives = 271/648 (41%), Gaps = 104/648 (16%)

Query: 16  KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKI 74
            E+   + V+ + +++  I  PR+   G LS     +LS+      + IA E I+  +  
Sbjct: 17  SEVSKDVGVDIEAVEK-AITIPRE-EFGDLSI----VLSKIG----IDIALEKILNMVNR 66

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPT 133
              V      G  ++N++L  +   +++ + +VSG E YG  +  K  +V IE+VSANP 
Sbjct: 67  CSYVKKSDGVG-IYVNMFLDRTRFTELVFNSIVSGEENYGIFIDDKPRRVVIEYVSANPI 125

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF----------- 182
            P+H+G  R AV+GD LA +   +G  V   +YIND G Q+  LAL +            
Sbjct: 126 HPLHIGAARNAVLGDFLARIHRKTGNTVQTRFYINDVGRQVALLALGIMKLGSIDIPNDV 185

Query: 183 -------------------WRYQQALYNNDS--------DLPEGYYPGVYLKHVGKELAD 215
                              +  ++ L N           +L +       L+ +  E+ D
Sbjct: 186 KPDHWLGTVYAITNTIAEIYTLKKRLENTGDIERKELVKELDQLLIDASKLREIAPEIFD 245

Query: 216 KYSSELLNFP--------------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           K S EL N                 E+W+  +   +V+  +K  ++ L  L I+ +I+  
Sbjct: 246 KISEELKNIDIEQEISKIMRSYERGEEWIKNIIRKTVELCIKGFKETLSRLGIEIEIWDW 305

Query: 262 EDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           E D        +  +ID L +  +  V++G      ++  +  ++ R+    R     + 
Sbjct: 306 ESDLV--WSKEVDKLIDELKKRPETIVHKGAYALDFTEILKDTEIRRR---LRIPENLEI 360

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
                 +SDG+  Y   D+ Y   K+ E   D +I V+ S+ +    ++      +  +K
Sbjct: 361 PPLIFQRSDGTTLYTVRDIVYTLKKFREFNADQVINVIASEQTLPQAQIRLALYLLGYRK 420

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
              N+L      +  +GM  KMS R G  ITL  +++E                      
Sbjct: 421 EAENLLHYSYEIVNVEGM--KMSSRRGRIITLDSIIEEAKIRALAELEKRGNRSEELAEK 478

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G  +++F +L    S  + F +  V    + N   Y+ Y YAR   IFR+A++   +L+
Sbjct: 479 IGIAAIKFYLLSVTPSRPVKFAWESVLNFER-NSAPYLLYTYARVEGIFRKAREKGIELN 537

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +           +E  +   +LI ++AEYP + +   +  +P  LA Y+  LA  F+  +
Sbjct: 538 WKELLSQADLGFAENHSRRWRLIKYIAEYPDIFKKTYLELDPSILATYILRLADEFNSWY 597

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                      V   + ++   +L LV+++ +++ + L I+G+E    
Sbjct: 598 DEE------PIVLEQDPRVRASKLLLVYSIRTVLRNALEILGIEVVER 639


>gi|224534693|ref|ZP_03675265.1| arginine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513941|gb|EEF84263.1| arginine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 586

 Score =  294 bits (753), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 120/617 (19%), Positives = 232/617 (37%), Gaps = 75/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M         +K+ +  I   + + K I LD+I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKNIKDEISIIVTNLALSKNIKLDKININIQKPPKNDLGDISI-LIFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNL 116
            L   TI+E I+  +K       +   G  ++N+ +    Y++  +  I      YG + 
Sbjct: 58  KLPIATISEEIIKNLKAKY---EIKAMGP-YLNIKIPRKEYIKNTIQMINTQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R   +G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLP 231
             L+ + ++   +    +     ++ G +     K     E A++   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHFIGDFYVQYNKYAQENENAEEEIQDLLLKWEQKDAS 232

Query: 232 IVKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            ++ +       I  I++  K  N   D    E +      + + + +     +G+ Y+ 
Sbjct: 233 TIELWEKLNKWAIEGIKETYKITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYKR 288

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERG 348
                        D      +           + L++S+G+  Y   DL     +  E  
Sbjct: 289 EDGAICIDLPLDSDEKVDTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEFN 339

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           F+ MIYV+G++   + K L  V+  +   K +    L   +    DG   KM  R G+ I
Sbjct: 340 FEEMIYVVGNEQIQHFKSLFFVSEKLGISKNKKLFHLSHGMVNLIDG---KMKSREGNVI 396

Query: 409 TLRHVVDE--------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442
              +++ +                          +   ++ + +L     + + F+  K 
Sbjct: 397 DGDNLISDLMESIMSPEITQKIENKENAKKNALNIALGAIHYYLLKSAVHKDIIFN-KKE 455

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  +   +   +         I  E      E +++  +
Sbjct: 456 SLSFTGNSGPYIQYVGARINSILEKYNALSIPI------MEKIDFELLKHEKEWEIVKII 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I  A     P  L  Y Y LA  F  ++        +R +   N  LT  R++ 
Sbjct: 510 SELEENIIKAAKDLNPSILTSYSYSLAKHFSAYYQ------EVRVIDTFNIDLTTARIEF 563

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 564 LKAILQTIKNCMYLLNI 580


>gi|66823143|ref|XP_644926.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74857747|sp|Q558Z0|SYRC_DICDI RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS
 gi|60473123|gb|EAL71071.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 589

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 124/640 (19%), Positives = 235/640 (36%), Gaps = 120/640 (18%)

Query: 12  KNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAA-MILSRPLGLDPLTIAELIV 69
           +   K++    ++E  KIL+   IE  ++      +     +   + L   P  +A    
Sbjct: 4   EEIAKQLSVLTEIEANKILE--CIESTKNKDMADFAVPIPKLNKFKKLVGKPDQLAIDFA 61

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
           ++I+++  +      G  ++N  ++     ++IL  ++    +YG    GKG KV +EF 
Sbjct: 62  SKIQLNDCIQGASATGN-YLNFKVNRLLQVQEILKEVINQKEKYGMTEQGKGKKVIVEFS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P H GH R  ++G+ + +L     YE     Y+ D G Q   LA+    +  ++
Sbjct: 121 SPNIAKPFHAGHLRSTIIGNFMVNLFNELAYETVSMNYLGDWGKQYGLLAVGFEKYGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVG--------------------------------KELAD 215
            L  +    P  +   VY++  G                                 + A 
Sbjct: 181 ELLAD----PIKHLYNVYVQINGEAEKEEEAKKKYAEEIAAGVEPTAPLQTTPTIHDTAR 236

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            Y   + +   E  L I K +   +++K  +D    LN++ DI+  E     G       
Sbjct: 237 AYFKRMEDGDAEA-LAIWKRFRDLSIVKY-KDIYNRLNVKFDIYAGESLVTEGMTIE--- 291

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
               L  +  +         S+  +  D+ +   L +           + K+DG+  Y  
Sbjct: 292 -FKKLQDKNLL-------EDSQGAKVIDLSKPNKLGKV---------LVQKTDGTTLYIT 334

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            D+A    +    GFD M YV+ S    + ++L  +   +  +  +    +         
Sbjct: 335 RDIAAAVDRKNNIGFDKMYYVVASQQDFHFRQLFDILGKMDYQWQKDLTHINY------- 387

Query: 395 GMPIKMSKRAGDFITLRHVV----------------------------DEVGSDSVRFMM 426
           GM   MS R G  + L  ++                            D VG  +V    
Sbjct: 388 GMVKGMSTRKGTVVFLEDILNKTQKKMLKIMKQNEQKFAEIEDPEKVADIVGLSAVVIQD 447

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVI 485
              K ++  DF++ ++ + S  +   Y+QYA+AR  S+ R++  +  P+ +  L      
Sbjct: 448 FNAKRNKDYDFNWDRMLK-SDGDTGPYLQYAHARLCSLERKSGFEFNPNANLSLLS---- 502

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 +     L + +  YP +I+      EP  L  YL++LA              ++
Sbjct: 503 ------EPEAFNLAITIGRYPEIIQLTHNQLEPSTLVGYLFELAHAVSS-------AHQV 549

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +++   + +   R  L  A   I+ SGL I+G+     M
Sbjct: 550 LWIKDREKDVAEARFVLYWAAKVILGSGLRILGLVPLERM 589


>gi|224533617|ref|ZP_03674206.1| arginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225548678|ref|ZP_03769725.1| arginyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224513290|gb|EEF83652.1| arginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225370708|gb|EEH00144.1| arginyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 585

 Score =  293 bits (751), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 240/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|46200208|ref|YP_005875.1| arginyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|81405227|sp|Q72GE2|SYR_THET2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46197836|gb|AAS82248.1| Arginyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 592

 Score =  293 bits (750), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 128/631 (20%), Positives = 239/631 (37%), Gaps = 96/631 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           L+  L+E   +   E  +  R+ + R      G         L++ L   P  IA+ +  
Sbjct: 2   LRRALEEAIAQALKEMGVPARLKVARAPKDKPGDYGVPL-FALAKELRKPPQAIAQELKD 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           R+ +   V+   I   G++N  L    L       +   +        +   V +E  S 
Sbjct: 61  RLPLPEFVEEA-IPVGGYLNFRLRTEAL-------LREALRPKAPFPRRPGVVLVEHTSV 112

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NP   +HVGH R   +GD +A ++A++G EV    YI+D G Q    A ++F      L 
Sbjct: 113 NPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQ---AAETLFALRHYGLT 169

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            +  +  + +    Y++       ++    +           +++  V  ++      + 
Sbjct: 170 WDGKEKYDHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGELREE-VNRILLAQMATMH 228

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           ALN ++D+ + E D  R     ++  +  L +  +V+     P + K      MD   ++
Sbjct: 229 ALNARYDLLVWESDIVR--AGLLQKALALLEQSPHVFR----PREGKYAGALVMDASPVI 282

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-------------------------- 344
                  +D    LL+S+G+ TY+A D+A+   K                          
Sbjct: 283 ----PGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPE 338

Query: 345 ---YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIK 399
              Y    +  I V+    S     + A  A         + + L  E V L       +
Sbjct: 339 GEAYTPKAEETINVIDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLL----EGRQ 394

Query: 400 MSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSEL 434
           MS R G  +++  V++E                         V   ++RF M+  +  + 
Sbjct: 395 MSGRKGLAVSVDEVLEEATRRARAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQ 454

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +DF + +     + +   YVQYA+AR  SI R+A +               P  S+    
Sbjct: 455 IDFRYQEALSF-EGDTGPYVQYAHARAHSILRKAGEWG------------APDLSQATPY 501

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L + L ++   +  A   + P+ LA YL DLA+ ++ +++          V      
Sbjct: 502 ERALALDLLDFEEAVLEAAEEKTPHVLAQYLLDLAASWNAYYNARENGQPATPVLTAPEG 561

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  +RL LV ++   + +GL+++G+ +P  M
Sbjct: 562 LRELRLSLVQSLQRTLATGLDLLGIPAPEVM 592


>gi|221218053|ref|ZP_03589519.1| arginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225549660|ref|ZP_03770626.1| arginyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192001|gb|EEE18222.1| arginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369937|gb|EEG99384.1| arginyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 585

 Score =  292 bits (749), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 240/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 DFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIESIIPEMTQKIENKEGAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|170114617|ref|XP_001888505.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636617|gb|EDR00911.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 587

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 102/560 (18%), Positives = 215/560 (38%), Gaps = 73/560 (13%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVV-------SGIEYGR 114
            IA  ++   + D  ++S+ +  + F++  ++  + + ++L+ +            EYG 
Sbjct: 64  EIAATVIEGFQPDEWIESI-VLDRSFLHFRVNTTNMICQVLNQVNALTHLTPSGQPEYGS 122

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           N  GKG +V IE+ S N     H+GH R  ++G  LA+L    G+EV    Y+ D G Q 
Sbjct: 123 NDSGKGKRVIIEYSSPNIVKEFHLGHLRSTIIGAFLANLYKACGWEVISMNYLGDWGTQF 182

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EE 227
             +A        Q  ++ D   P  +   VY+K         ++  + +         +E
Sbjct: 183 GMVATGYEKYGSQEEFDQD---PIMHLYNVYVKVTKDLETDPKVKVEAARWFKRMEDGDE 239

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
             L     +   ++ K   +    LNI+ D++  E +  +     +   +  L   G + 
Sbjct: 240 DVLKKWHGWRETSLEKYQ-EAYDQLNIKFDVYTGESNVSK---ESMDKALVQLQDMGLIS 295

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           +         + ++ D+++  L              + K+DG+ TY   D+     +YER
Sbjct: 296 DR-------DSAKEVDLNKWNL----------KAPIVRKTDGTSTYLTRDIGGAIERYER 338

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYR------------ 393
             FD MIYV+G+    ++ +   +   +    A+ +  +   +V+  R            
Sbjct: 339 YKFDKMIYVVGAAQDFHLAQFFKIVELMGFPWAKNLLHINYGMVQGMRTRKGTAVFLDRI 398

Query: 394 -----DGMPIKMSKRAGDFITLRHVVD---EVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                + M  +M K    +  ++       E+G   ++   +  K      F++ ++   
Sbjct: 399 IKKAGNVMHEQMKKNDEKYAVIQDPQATSLEIGITGIKIQDMAAKRINDYTFNWDRMLSF 458

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + +   Y+QYA++R  SI R+   + P         + + Q S    +  ++   L  Y
Sbjct: 459 -EGDTGPYLQYAHSRLASIGRKNPQLLPLPPTSQIATHALAQYS----NAREIAFLLGTY 513

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P V+  A    EP  +  + + LA      W       R+      + +    ++ L   
Sbjct: 514 PDVVNVALKTHEPSGVVTFAFKLAHAISTAWD------RVIVKGEEDVEKARAKMYLYEC 567

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ + + ++ +     M
Sbjct: 568 AKEVLAAAMRLLSIRPLERM 587


>gi|323348256|gb|EGA82505.1| Msr1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 624

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/552 (20%), Positives = 206/552 (37%), Gaps = 89/552 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 96  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 150

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 151 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 210

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K +  +
Sbjct: 211 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INMD 266

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I   +   ++   I      LNI  D
Sbjct: 267 LAKEEINGNSKCGISGEARSFFKNLENGDENAIKIWNRFRSLSIHHYI-QTYSRLNINFD 325

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 326 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 366

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 367 KRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 426

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 427 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 479

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++    +  K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 480 DNPQRVADLIGVSAIIIQDMKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 538

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           + D   D+             +  +   ++L+  LA+YP V+  A   QEP  +  YL+ 
Sbjct: 539 SSDFTTDM------LIRADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFK 592

Query: 528 LASVFHGHWSHG 539
           +       +   
Sbjct: 593 VCHQVSSCYKKN 604


>gi|218249954|ref|YP_002375102.1| arginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321900|ref|ZP_03797426.1| arginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|218165142|gb|ACK75203.1| arginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226233089|gb|EEH31842.1| arginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 585

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 127/617 (20%), Positives = 240/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDAS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 DFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|312149088|gb|ADQ29159.1| arginyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 585

 Score =  292 bits (748), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 240/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      + + L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEIGKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNTQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +  +   + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFKIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIESIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKIIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|164663129|ref|XP_001732686.1| hypothetical protein MGL_0461 [Malassezia globosa CBS 7966]
 gi|159106589|gb|EDP45472.1| hypothetical protein MGL_0461 [Malassezia globosa CBS 7966]
          Length = 630

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 111/578 (19%), Positives = 205/578 (35%), Gaps = 89/578 (15%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKG---FINL-YLSPSYLRKILSSIVVSGI-------- 110
            + E ++   + +  ++ V   G      +N+  L P  L  + +     G         
Sbjct: 87  ELQEKVLTEFQPNEYIERVTKQGPAVLYHVNVKTLIPLVLSTVHALTYGDGAATEGDSGK 146

Query: 111 ---EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               YG N  GKG    +EF S N   P H GH R  ++G  LA+L   +G++V R  Y+
Sbjct: 147 KLPSYGSNYSGKGKLCLVEFSSPNIAKPFHAGHLRSTIIGAFLANLYEANGWDVKRLNYL 206

Query: 168 NDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
            D G Q   LAL    +  +Q L  N    P  +   VY++       +    E ++   
Sbjct: 207 GDWGKQFGLLALGWRRFGDEQKLQEN----PVQHLFDVYVEINKLASEEGGKGEQIHDEA 262

Query: 227 EKWLPIVKDYSVQAMMKI----------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            ++   ++D   + +++            ++    LN+  D +  E    +     I D 
Sbjct: 263 REFFKGMEDGKEENLLEWERFRDLSIEKYKETYARLNVHFDEYRGESKVRK---HHIEDT 319

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +  L    +V                  +   LL   +    +    + + DG+  Y   
Sbjct: 320 LSKLRTMDFVSR---------------EENGALLADLSKFKLEKA-VVERKDGTPLYLTR 363

Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           D+   + +YE   FD MIYV+ S    +  +   +   +    AQ      E +     G
Sbjct: 364 DIPEAEQRYEQYKFDKMIYVISSQQDLHCAQFFKILELLGHPWAQKE---SEGLLHINFG 420

Query: 396 MPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRFMML 427
           M   MS R G  + L H++DE                            VG  +++   +
Sbjct: 421 MVQGMSTRKGTVVFLDHILDETKEQMHDVMRKNEVKYAQLEDPERTADIVGMTAIKIQDM 480

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             K      FD+ ++    + +   Y+QY + R  S+ R   +    L  +      +  
Sbjct: 481 AGKRINNYTFDWKRM-FSFEGDTGPYLQYNHVRLCSMERMNAEDGLVLPKEDLDFETMRT 539

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           E       L+++  LA++P V+  A+   +   +  + + L       W           
Sbjct: 540 ERLQVPEALEIVWLLAQWPDVVRTASRDHQASTIVTFCFKLTHAISSAWEK-------LI 592

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V+   R   ++RL L      +++S L ++ V     M
Sbjct: 593 VKNQERDDALVRLWLYRCAKDVLSSALRLLTVTPLERM 630


>gi|149921434|ref|ZP_01909887.1| hypothetical protein PPSIR1_26758 [Plesiocystis pacifica SIR-1]
 gi|149817754|gb|EDM77219.1| hypothetical protein PPSIR1_26758 [Plesiocystis pacifica SIR-1]
          Length = 619

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/642 (17%), Positives = 213/642 (33%), Gaps = 91/642 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  +   L+    +           ++  P     G L+      L++ L   P  IA 
Sbjct: 6   LAQEVAKVLQPALPEAAGLDVAAVAELLAPPPKPEMGDLAF-PCFRLAKALRNAPPKIAA 64

Query: 67  LIVA------RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--EYGRNLIG 118
            +         + ++  +     AG  ++NL L+P     +L      G   +Y      
Sbjct: 65  ALAGTLTEQGALGVEGLIAEASPAGP-YLNLRLNPHRTGALLLPAWARGERPDYAGTAAH 123

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              KV +EF   N     HVGH R   +GD L  L+  +G EV    Y+ D G  +    
Sbjct: 124 GDAKVMVEFSQPNTHKGFHVGHMRNLCLGDALVRLLRATGNEVVAANYLGDVGTHVAKCM 183

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
             +     +    +  +     Y     +    + A     E      E     + +   
Sbjct: 184 WGLETFAGEPPTEHRGEWLGKIYEQSTSRLDAWKAAADEGDEAAKAEYEAARARMSEILR 243

Query: 236 -------YSVQAMMKIIRDDLKALNIQHDIFIS--EDDFHRGDPS-PIRDIIDNLARQGY 285
                     +A  +  +  L A +  +       E  F+  +   P   +++    +G 
Sbjct: 244 GIETRVPEHREAWERTRQWSLDAFDEIYAWTRVDFERVFYESEVDEPGLKLVEEYLEKGV 303

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
             E           +  +++                  L KSDG+  Y   DLA  + K+
Sbjct: 304 FIESQGAV----GIENPEVEHMPFFM------------LRKSDGTGLYATKDLALARMKF 347

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           E  G D  IYV+ +  S + +++      +   +AQ+   +   +    DG    MS R 
Sbjct: 348 EEYGVDRSIYVVDARQSDHFRQVFLTLKKMGFDQAQLCEHVAYEMVELPDGA---MSSRK 404

Query: 405 GDFITLRHV----------------------------------------VDEVGSDSVRF 424
           G+ I  R +                                        +++V   ++++
Sbjct: 405 GNVILFRALREQLAAALESSHFEGIRSNPDMLAEWGADEASANAAMAKAIEDVSLGAIKY 464

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            ML R N++ + FD  K    +  +    +QY  AR  S+ R+   I   LD  L     
Sbjct: 465 GMLARDNNQKIVFDMDKWTMVAGGDGGAALQYVTARSASLLRKNAAIGKTLDPALLEDGA 524

Query: 485 IPQE-SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
             +  +  + +E  L+  L   P  + +A+    P  L   LY ++  ++          
Sbjct: 525 TLEPGTLTEPAERGLMQELINLPGTVAHASKLLRPSLLCAQLYAISRAYNRFQQTCN--- 581

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               V+     L   RL LV A    ++ GL+++G+     M
Sbjct: 582 ----VKNQEGGLLQSRLLLVQATREALSWGLSLLGIPVLERM 619


>gi|216264482|ref|ZP_03436474.1| arginyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980955|gb|EEC21762.1| arginyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 585

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 240/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDAS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  +      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFKLLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|15807552|ref|NP_296288.1| arginyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|39932240|sp|Q9RRC4|SYR_DEIRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|6460396|gb|AAF12109.1|AE002086_1 arginyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 609

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 126/645 (19%), Positives = 231/645 (35%), Gaps = 102/645 (15%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  ++LK  +++   ++ +    +D  + E P +   G   T AA  +++  G +P  IA
Sbjct: 2   DLKAQLKAAVEQAAHQMGMP---VDAAIQETPANK-PGDYGTPAAFQMAKAAGGNPAQIA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             +   + +   +  V   G  F+N +L      + +       +E    L  +  KV I
Sbjct: 58  AQLAQTVVLPAGIRRVEATGP-FLNFFLDAGAFVRGV-------VERPFELPKREGKVVI 109

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFW 183
           E  S NP   +HVGH R  V+GD++A ++  +G+ V  + YI+D G Q      A   + 
Sbjct: 110 EHTSVNPNKELHVGHLRNVVLGDSMARILRAAGHTVEVQNYIDDTGRQAAESLFATQHYG 169

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R    +   D  L EG Y  +       EL       +      +  P+V+       +K
Sbjct: 170 RVWDGVQKYDQWLGEG-YVQLNADPQKPELESGIMEIMHKLEAGELRPLVEQT-----VK 223

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
                   L  ++D+   E D        +   ++ L   G  Y       K       D
Sbjct: 224 AQLQTCFRLGARYDLLNWESDVV--GSGFLAQAMNILE--GSRYTSRPTEGKYAGAFIMD 279

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY------------------ 345
           +             ++ +  L++S G+  Y A D+ Y   K+                  
Sbjct: 280 VSEFMPGL------EEPNVVLVRSGGTAMYAAKDIGYQFWKFGLFEGMKFKPFMQDPEGN 333

Query: 346 -------------ERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
                        ER F +   +I V+ S        + +      E++ +   +     
Sbjct: 334 TIWTSAPDGQPDDERRFGHAQEVINVIDSRQDHPQTVVRSALGVAGEQEKEERSIHLSYA 393

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGSDS 421
            +  +G    +S R G  ++    +DE                            +G  +
Sbjct: 394 FVTLEGQT--ISGRKGIAVSADDAMDEAQKRALSVLQGINPDLAAREDAAEIARRIGLGA 451

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +RF ML  + +  +DF + +       +   YVQYA  R  +I ++A++     D     
Sbjct: 452 IRFAMLKAEPTRKIDFRWEQALAL-NGDTAPYVQYAAVRAANILKKAEEAGYATDGTGAD 510

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH-GR 540
            + +P           L   +A+ P V   A     P+ +A Y  DLA+ F+  ++   +
Sbjct: 511 WDALPDIDLV------LAKQIAKLPEVAAQAARIHSPHVVAQYALDLATSFNAWYNAKTK 564

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +      V  +   L   RL L+  +       L++IG+E P  M
Sbjct: 565 QGKPATNVLQSEEGLREARLALIVRLRKAFEDTLDLIGIEIPAAM 609


>gi|213615487|ref|ZP_03371313.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 433

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/462 (20%), Positives = 169/462 (36%), Gaps = 64/462 (13%)

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           F G       ++ D G Q   L   +  + Q+   +      EG+Y            A 
Sbjct: 4   FLGRSCYCANHVGDWGTQFGMLIAWLEKQQQENAGDMALADLEGFYRD----------AK 53

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K+  E   F E     +VK  S     + +   L  + +  +       + R + +  RD
Sbjct: 54  KHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQI----TYDRLNVTLTRD 109

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYT 332
            +   +    +  GI+   K+K     + +   ++F        GD +   + K DG Y 
Sbjct: 110 DVMGESLYNPMLPGIVADLKAKGLA-VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYL 168

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390
           Y   D+A  K +YE    D ++Y + S    ++ +   +          + +      + 
Sbjct: 169 YTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMM 228

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423
           L +DG P K   R G  + L  ++DE                           VG  +V+
Sbjct: 229 LGKDGKPFK--TRTGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVK 286

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L +  +    FD+  +    + N   Y+QYAY R  S+FR+A     D+D       
Sbjct: 287 YADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQALASA 340

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +      +  E QL   L ++   +        P+ +  YLYD+A +F G + H     
Sbjct: 341 PV---IISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHC---- 393

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               + A N  +   RL+L    A  +  GL+ +G+E+   M
Sbjct: 394 --PILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 433


>gi|226320820|ref|ZP_03796373.1| arginyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233762|gb|EEH32490.1| arginyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 585

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 239/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      + + L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEIGKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEKIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIESIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|195941727|ref|ZP_03087109.1| arginyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 585

 Score =  291 bits (744), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 239/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDAS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  K  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYKITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIESIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSDIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  +      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMKKIDFKLLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           +  +   I + + ++ +
Sbjct: 563 LKTILQTIKNCMYLLNI 579


>gi|223888905|ref|ZP_03623496.1| arginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885721|gb|EEF56820.1| arginyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 585

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 239/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      + + L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEIGKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y    +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYTNNTIQMVNTQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +  +   + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFKIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|225552118|ref|ZP_03773058.1| arginyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371116|gb|EEH00546.1| arginyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 585

 Score =  290 bits (743), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 238/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K       +   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKY---EIKAMGP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDAS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D +    +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDENADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLLDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIESIMPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELGENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|224532728|ref|ZP_03673345.1| arginine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512346|gb|EEF82730.1| arginine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 585

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 238/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDAS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F  MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFKEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E    I NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENIINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           +  +   I + + ++ +
Sbjct: 563 LKTILQTIKNCMYLLNI 579


>gi|322702457|gb|EFY94103.1| arginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 627

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/605 (18%), Positives = 209/605 (34%), Gaps = 68/605 (11%)

Query: 14  YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
            L  I   +      L    I+ P    +G L      +  R  G  P   A  + A   
Sbjct: 44  LLTNILANLTGCDATLIYESIQLPNTLPNGDLVLPVPRL--RLKGPKPNLHAVELAASFP 101

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG----------TKV 123
            +  +     A    +  + +P  L  ++   +    E     +  G           K+
Sbjct: 102 ENQPLFQHPTASAIHLPFFFTPKSLSHLILPYLFERHEAYGRDLTMGLDSSAPTERRKKI 161

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            IEF S N     H GH R  ++G  +A+L    G++VT+  Y+ D G Q   LA+  + 
Sbjct: 162 IIEFSSPNIAKEFHAGHLRSTIIGAYIANLYESMGWDVTKVNYLGDWGKQFGLLAVG-WE 220

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R+          L      G+Y +              +   +   + + + +   ++ +
Sbjct: 221 RFGSEQLLAQEPLKHLLDVGLYAQRNAYF-------RRMETGDTDAIALWQRFRDISIDR 273

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            I      L+I  D +  E        + +  +  +L ++G VY+        +      
Sbjct: 274 YI-ATYARLSIDFDEYSGESQV---KSTTVDAVESSLKKKG-VYK--------EHDGSWI 320

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSG 362
           +D ++  F+           +    GS TY   D+A    +  +  FD MIYV+  +   
Sbjct: 321 IDFEEYGFKGLGTA-----VVRGRTGSTTYLLRDVAAILEREVKYNFDKMIYVVSCEQDL 375

Query: 363 YVKRLEAVAAAVS--EKKAQINV-----------------LLCELVRLYRDGMPIKMSKR 403
           Y KR+      +   +   ++                   LL +++   RD M   M + 
Sbjct: 376 YFKRVFRTLELMGRSDLAGRLQHINFGKVLGMSSRLGNVQLLGDILDQSRDAMHDVMRRN 435

Query: 404 AGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
              +  +     V + VG  +V    +  K      FD  ++    + +   Y+QY++AR
Sbjct: 436 TTKYAQVEDPESVAESVGISAVMVQDMSGKRINNYPFDITRMTSF-EGDTGPYLQYSHAR 494

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPY 519
             SI R+A     ++           +E   D    + L+  +A+YP V   A    EP 
Sbjct: 495 VNSILRKAGLTRQEVAEHCLRHPTSLEEQFSDTPHCVNLLRLIAQYPDVAAAALRNLEPS 554

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            +  YL+ L       +   +            R + + R  L      ++ +G+ ++G+
Sbjct: 555 TILTYLFRLTHQLSSCYDVVQVTGT-----NEGRDVMLSRAGLYEGARQVLENGMRLLGL 609

Query: 580 ESPNE 584
              + 
Sbjct: 610 TPVDR 614


>gi|320590291|gb|EFX02734.1| arginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 694

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 123/644 (19%), Positives = 215/644 (33%), Gaps = 117/644 (18%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIV---IERPRDCAHGHLSTNAAMILSRPLG 58
             F  + + L N L  +         +   IV   ++       G L    A+   R  G
Sbjct: 108 NPFDLYRAHLANTLATVT-------GVAPAIVYPALQWTTGLDKGDL--ILAVPALRVKG 158

Query: 59  LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-----------ILSSIVV 107
             P  +A+  V     +  +         FI  Y  P  L K              +   
Sbjct: 159 RKPDELAKEWVEAFPTEDALVEPPTVTGYFIQFYFKPGPLAKLTLPTILREGKAFGNDKT 218

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +G++  ++      ++ +EF S N   P H GH R  ++G  LA+L    G++V R  Y+
Sbjct: 219 NGLQDPKDASKGRKRLVVEFSSPNIAKPFHAGHLRSTIIGGFLANLHEGVGWDVVRINYL 278

Query: 168 NDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL 213
            D G Q   LAL+   +  ++AL  N        Y  +               K    + 
Sbjct: 279 GDWGKQYGLLALAYERFGDEEALSKNPIAHLFDIYVKINAAMSEEKDKIDALKKEGKTDE 338

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKI----------IRDDLKALNIQHDIFISED 263
           A K     L+    ++   + D    A+              ++    LNI+ D +  E 
Sbjct: 339 AQKLLDASLDEQARQYFKKMTDGDATAVALWRRFRDLSIVRYKETYARLNIRFDDYSGES 398

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
              +         +  L       EG L    SK     +             G  ++RP
Sbjct: 399 QVPQASMDRSAARMAELNITEES-EGALIVNFSKHVPGKE-------------GKRLERP 444

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK------ 377
           L                   + +  FD MIYV+ S    ++K+L  +   +  K      
Sbjct: 445 L-------------------EEKYHFDKMIYVVASAQDLHLKQLFKIVELMGYKEIADKC 485

Query: 378 -KAQINVLLC------------ELVRLYRDGMPIKMSKRAGDF---ITLRHVVDEVGSDS 421
                 ++L             +++R   D M   M      +        V D +G  +
Sbjct: 486 SHVNFGLVLGMSTRRGTVKFLDDILRDVADKMHEVMKTNEVKYSQVENPEAVADVLGISA 545

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           V    +  K      FD  K+    + +   Y+QYA+AR  SI R++     DL+     
Sbjct: 546 VMVQDMTGKRINNYTFDIAKMTSF-EGDTGPYLQYAHARVCSIERRSGLSHSDLE----- 599

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                     +     +I  LA++P V++N     EP  +  YL+ +       + H + 
Sbjct: 600 --TADTTLLAEAHATNIIRLLAQWPDVVQNTLKTLEPTTVLTYLFKMTHALSSSYDHLQ- 656

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 V  +  +L   R+ L  A   ++ +G+ I+G+   + M
Sbjct: 657 ------VIGSEPELLKARMALYGAARIVLGNGMRILGLSPVDRM 694


>gi|312148451|gb|ADQ31110.1| arginyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 585

 Score =  289 bits (741), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 126/617 (20%), Positives = 239/617 (38%), Gaps = 76/617 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPL 57
           M        ++K+ +  I   + +   I LD I I  ++P     G +S      +S+ L
Sbjct: 1   MN--KSVKKKIKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEISKTL 57

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNL 116
            L    I+E I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG + 
Sbjct: 58  KLPIEIISEEIIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNAQKDTYGTSK 113

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                K+ +EF S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I  
Sbjct: 114 YLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICK 173

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW-- 229
             L+ + ++   +    +     +  G  Y+K+       E A+K   +LL   E+K   
Sbjct: 174 SMLA-YKKFGNGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVS 232

Query: 230 -LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + + K  +  A+ + I++  +  N   D    E +      + + + +     +G+ Y+
Sbjct: 233 TIELWKKLNKWAI-EGIKETYEITNTSFDKIYLESEIFEIGKNVVLEGL----EKGFCYK 287

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YER 347
                         D      +           + L++S+G+  Y   DL     +  E 
Sbjct: 288 REDGAICIDLPSDSDKKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEF 338

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F+ MIYV+GS+   + K L  VA  +   K +  + L   +    DG   KM  R G+ 
Sbjct: 339 NFEEMIYVVGSEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNV 395

Query: 408 ITLRHVVD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKV 442
           I   +++                           +   ++ + +L     + + F+  K 
Sbjct: 396 IDADNLISNLIELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKE 454

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 N   Y+QY  AR  SI  + K         +     I  E      E ++I  +
Sbjct: 455 SLSFTGNSGPYIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKII 508

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +E      NA     P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ 
Sbjct: 509 SELEENTINAAKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEF 562

Query: 563 VHAVASIINSGLNIIGV 579
           + A+   I + + ++ +
Sbjct: 563 LKAILQTIKNCMYLLNI 579


>gi|256425385|ref|YP_003126038.1| arginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040293|gb|ACU63837.1| arginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 642

 Score =  289 bits (740), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 124/637 (19%), Positives = 235/637 (36%), Gaps = 99/637 (15%)

Query: 29  LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKG 87
              I I   +    G  +       ++   L P   A+ +   ++  +PD+ + +   KG
Sbjct: 25  AKDIAINTTKPEFEGEYTI-LVFPFTKFSRLKPEETADRLGKYLQEHNPDLVAGYNVIKG 83

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N+ ++  Y  + L     +           G KV +E+ S N   P+H+GH R   +G
Sbjct: 84  FLNIQVNEQYWAQYLQQHFNN--RNIGKKPSNGKKVMVEYSSPNTNKPLHLGHLRNNFLG 141

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
             ++ ++  +GYEV +   +ND G  I    L+ +  +        + +   +  G Y  
Sbjct: 142 YAVSEILKANGYEVIKANLVNDRGIHICKSMLA-WQLFAHGDTPESTGIKGDHLVGDYYV 200

Query: 208 HVGKELAD----------KYSSELLNFPEEKWLPIV-------KDYSVQAMMKIIRDDLK 250
                L +          ++  +     +++ +  +       +  + Q  +  + D++K
Sbjct: 201 KFESILKEQTEPIIARALEHDYKDFEGADKERMEKLVTVFHKPEIQADQEKLDKLNDEIK 260

Query: 251 ALN-----IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM- 304
            L+     I     I    +  G+P  +R +   +   G+VY+G     K        M 
Sbjct: 261 ELSRKQTEIMQQAKIMLQQWEAGNPE-VRALWATM--NGWVYKGFDQTYKRLGIDFDKMY 317

Query: 305 -------------------------DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                                    +   +    T  G D ++ LL+ DG+  Y   DL 
Sbjct: 318 YESETYLLGKDLVEEGLAKGILFKKEDNSVWIDLTADGLD-EKLLLRGDGTSVYMTQDLG 376

Query: 340 YFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             + KY +   D  +YV+  + + + K L+ +   + E  A     L   +     G   
Sbjct: 377 TARLKYADYQMDQSLYVVADEQNYHFKVLQLILQKLQEPCADGIYHLSYGMVELPSG--- 433

Query: 399 KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWR 429
           +M  R G  +    ++ E                             +G   ++F +L  
Sbjct: 434 RMKSREGTVVDADDLIVEMINTAEEQTKASGKLDDMSEDALGLLYNMIGLGGLKFFLLRV 493

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              + + FD  +          F VQYA+AR +SI R   D+ PD+D           + 
Sbjct: 494 DPKKKMVFDPKESISLQGFTSTF-VQYAHARIKSILR---DVAPDVD----KLEGYCHKG 545

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE-NPRLRFV 548
              T E +LIV   +Y  V+E A     P  +A Y Y LA  F+  ++  ++  P     
Sbjct: 546 SLTTLEKELIVLNEQYDNVLEEAAKEMSPSVIANYAYQLAQTFNSFYAEKKDGIPVHSVK 605

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           QA   +   +RLQ++   A+ I   + ++G++ P  M
Sbjct: 606 QAETPEKQKLRLQIIKLTATTIAKSMKLLGIDVPERM 642


>gi|56964053|ref|YP_175784.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910296|dbj|BAD64823.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 608

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 133/646 (20%), Positives = 235/646 (36%), Gaps = 111/646 (17%)

Query: 10  RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
            ++  L E       E +    + +E+P    HG  STN AM L+R    +PLTIAE I 
Sbjct: 2   HVEQTLIEAIAAAASEFQNDIDVELEQPAQLIHGDYSTNVAMKLARVARKNPLTIAETIK 61

Query: 70  ARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +++     V  + +   GFIN ++            +  G E     +    K  IE  
Sbjct: 62  EKLERQRLPVTGIEVVKPGFINFFI-------EWDEALADGDE--PQALSSSGKTVIEHT 112

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S NP    H+GH R A +GDTLA L+   G  V    Y++D G Q+     ++      +
Sbjct: 113 SINPNKSAHIGHLRNACIGDTLARLLKTCGENVEVHNYVDDLGNQLADTLTALLHTNSDS 172

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMMKIIR 246
                 D     Y  +   +    ++     E+L+  EE          V    +     
Sbjct: 173 EATRFGDYCWNVYSRLNEAYDKGTISTSIRDEVLHKLEEGNNSTAWLGYVVADKITSEHI 232

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-- 304
           +++    I +D+ + E D               + ++G+         +S    K D   
Sbjct: 233 EEMGQFGIDYDLLVWERD---------------IVQKGFWQTAFQKLKQSDVFVKQDSGP 277

Query: 305 DRKQLLFRSTMVGDD------VDRPLLKSDGSYTYFAADLAYFKCKY---ERGF------ 349
                + R +    +       D+ L++S+G  TY A D+AY   K+   +  F      
Sbjct: 278 QAGCWVLRMSDNESEEGSEHQSDKVLVRSNGVLTYTAKDIAYHMWKFGLLDDDFAYKEKW 337

Query: 350 ------------------DNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELV 389
                             D +I V+        K ++   AAV  +K   ++  +   +V
Sbjct: 338 PGLWTTASSGVPAAFGRGDAVINVIDYRQEYPQKVVKQALAAVGYEKEAERLFHVPYGVV 397

Query: 390 RLYR-----------DGMPI-KMSKRAGDFITLRHVV-------------------DEVG 418
            L +           DG  +  MS R G  I +  ++                   + + 
Sbjct: 398 SLSKQTASQLGLETEDGKSVYAMSGRKGIGIKISELIQHMKEAVRAQSTDASEATVEALA 457

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             ++R+ ML    +  + FD  +   Q   N   Y+ Y YAR  SI  +AK      +  
Sbjct: 458 FAAIRYNMLRYNTTSDIVFDLTEAT-QVTGNTGIYLIYTYARANSIITKAKQAGLSPEGA 516

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
            F           + +E  L+ HLA +  V   A  + EP  +  + ++LAS+++  +S 
Sbjct: 517 TFKGA--------EDAERALLKHLAGWDTVKRKAAASFEPNLICTFAFELASLYNRFYSQ 568

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                    ++A+  +    RL +   V+  +     I+G+ S  +
Sbjct: 569 C------PVLKADPLEQAK-RLAITERVSQQLERVFMILGLPSLKK 607


>gi|225563350|gb|EEH11629.1| arginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 636

 Score =  289 bits (739), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 117/654 (17%), Positives = 236/654 (36%), Gaps = 116/654 (17%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + ++     + Y+ E+  ++    + +    I+R +  AHG +    A +  R  G++ 
Sbjct: 29  NIISNPVDLYRCYVAEVVKQVVNCNEDIAYNSIQRTQVLAHGDVVLVVARL--RLKGVNI 86

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-----------VSGI 110
             +A  +  ++     + S    G  FI ++ + + L +++ S +           ++G+
Sbjct: 87  DQVAVDLSNKLCTISLISSPVPKGV-FIPIFFNETSLPRLILSYIFDRRQLYGHGNLAGL 145

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +  +N      KV +EF S N     H GH R  ++G  +++L    G++V +  Y+ D 
Sbjct: 146 KNPKNEAAGRKKVIVEFSSPNIAKEFHAGHQRSTIIGAYISNLYKSMGWDVLKINYLGDW 205

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK--------HVGKELADKYSSELL 222
           G Q   LA+       + L+  +   P  +   VY+K            + A     + L
Sbjct: 206 GKQFGLLAVGWQKFGSEELFQKE---PLKHLLDVYVKINTLFKSEQEASKSARNSGRDTL 262

Query: 223 NFPEE-------KWLPIVKDYSVQA--MMKIIRD--------DLKALNIQHDIFISEDDF 265
                        +   ++D   +A  + K  RD            LNI  D +  E   
Sbjct: 263 EIENRGLYAERNAFFKRMEDRDPEALSLWKRFRDISIERYISTYARLNISFDEYSGESTV 322

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
               P  I  + + L  +G +YE      +++ +   + ++       T         + 
Sbjct: 323 R---PETIEKVENMLKGRG-IYE------ENEGSWVINFEKHGARKLGTA-------VVR 365

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
              G+ TY   D+A    + E+  FD MIYV+ ++   Y +R+      +        ++
Sbjct: 366 NRGGTTTYLLRDVAAVLERVEKYEFDKMIYVVSAEQDSYFQRVFKTVEIMGYPDIAAKLV 425

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
                     G    MS R G    L  ++DE                            
Sbjct: 426 HINF------GKVQGMSSRLGTVKLLSDILDECGSAMHEVMRSNEAKYAQVADPEAVADV 479

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA---KDIFP 473
           VG  ++    +  K      FD  ++    + +   Y+QY++AR  SI R+A    D   
Sbjct: 480 VGITAIMAQDMSGKRINNYPFDITRMTSF-EGDTGPYLQYSHARLCSIMRKANLTADQVA 538

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             DF L            +   + ++  +A+YP +   A    EP  +  YL+ L     
Sbjct: 539 KADFSLLK----------EPHAIDILRLMAQYPDMTTQAFKTLEPTTILTYLFRLTHQVS 588

Query: 534 GHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESP-NEM 585
             +        ++ +  +   ++ + R  L      ++ +G+ ++G     + M
Sbjct: 589 SAYD------VIKVLGTDEGPEVMLARSALYEGARQVLENGMRLLGFTPVASRM 636


>gi|221061383|ref|XP_002262261.1| arginyl-trna synthetase [Plasmodium knowlesi strain H]
 gi|193811411|emb|CAQ42139.1| arginyl-trna synthetase, putative [Plasmodium knowlesi strain H]
          Length = 588

 Score =  288 bits (738), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/635 (19%), Positives = 232/635 (36%), Gaps = 104/635 (16%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--- 59
           L        ++ +++    I       + +V+    +   GH   N A  + +  G    
Sbjct: 4   LIKKIKEVFQHSIQKCFPSIS------EEVVVTY-ANAKFGHFQCNNAFNIFKKYGKELN 56

Query: 60  --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG-------- 109
             +   +++LI+  I  +   + +  + +GFI + LS  Y+ K L  +  +         
Sbjct: 57  VENAQKLSQLIIENISEN-FFEEIKSSPQGFITVKLSKQYIEKSLLKLYKNNKIEISVNI 115

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            E      G   +V ++F S N    MHVGH R  ++GD++ ++  F   +  R  +I D
Sbjct: 116 DEVKSGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICNIFEFLNVQTIRVNHIGD 175

Query: 170 AGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFP 225
            G Q   +   +   Y     N    ++L   Y     +  V KE     K  +  L   
Sbjct: 176 WGTQFGMIINYIVTNYPNFKENMPELTNLTSLYQEAKKIYDVDKEFEKNSKNYAIKLQNN 235

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           +E  L I K    ++  K      K L+I+ D ++ E  +    PS     +  L  Q  
Sbjct: 236 DEDSLFIWKKI-CESSKKEFNKIYKILDIKLD-YVGESHYINMIPS----TLKILKDQEL 289

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCK 344
           +                      + + S      V   L KS+G Y Y + D+A      
Sbjct: 290 L----------------TNVGDAICYHSENFK--VPLFLQKSNGGYGYDSTDVAALHYRL 331

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            E   D +IYV  +    + + +  VA        +  ++      L  +    K   R+
Sbjct: 332 KELNADCVIYVTDNGQLSHFETIFEVARRAQWANEKTKLIHVGFG-LVLNADNKKFKTRS 390

Query: 405 GDFITLRHVV-----------------------------------DEVGSDSVRFMMLWR 429
           G  I L +++                                   +E+   ++++  + +
Sbjct: 391 GTTIKLINLINEGTERAKKDLLERIQLKSEEEISYFEGVDIDKLSEELCVSAIKYFDIKQ 450

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             +    F +  +    K N   Y+ YAY+R  SIFR+      ++D D   ++ +   +
Sbjct: 451 NRNTDYKFSYDNMLN-VKGNTGLYIIYAYSRMCSIFRKC-----NIDMDQLSKDEL---N 501

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                E+ L +H+ ++P V          +KLA Y YDL ++F   + +       + + 
Sbjct: 502 LVSPYEVNLGLHILKFPDVFYFILKNMLIHKLAEYTYDLTTIFTAFYENC------KVIN 555

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + N K    RL L     S++   L ++G+++  +
Sbjct: 556 SENEK---SRLILCAISKSLLQICLKLLGLKAIEK 587


>gi|76800688|ref|YP_325696.1| arginyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|109895007|sp|Q3IUQ6|SYR_NATPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76556553|emb|CAI48124.1| arginine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 580

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 152/637 (23%), Positives = 261/637 (40%), Gaps = 111/637 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +    ++  L E            D + IE P +      +++ A  L+      P 
Sbjct: 1   MFIELRREVETALSEALDACGYPT---DDLGIEEPPEDVDAVFASSVAFRLASAAEAPPP 57

Query: 63  TIAELIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +A  + A +       V  +   G  ++N + S +Y  + L +      E    L  K 
Sbjct: 58  AVAGELAAELDAAGREYVGRIEQQGP-YLNFFPSEAYFEEALEAG---QSERFGELDSKD 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T V +E  SANPTGP+HVG  R  ++GD +A+L++++GY+V R YY+NDAG Q+     +
Sbjct: 114 TSVVVEHTSANPTGPVHVGRARNPIIGDAVANLLSYAGYDVDRHYYVNDAGRQMAVFTWA 173

Query: 181 VFWRYQQALYNNDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                      ++SDLPE       Y  V     G E  +    + +   E +   I++ 
Sbjct: 174 Y-------ETFDESDLPEPARDRAEYRMVRYYRKGNEYLENADPDAVEAAEAEIQDILQG 226

Query: 236 YS-------------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                          V  ++  ++  L  L  + D F+ E  F R       D++D L  
Sbjct: 227 LEDGDEATYERVGEVVDTVLDGMKACLARLPAEFDEFVKETQFMR--DGSTDDVVDRLQA 284

Query: 283 -QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
             G VYE                D  QL F       D +   L++DG+  Y   D+A+ 
Sbjct: 285 LDGAVYED---------------DAWQLAFAD----IDKNLVFLRADGTSLYTTRDIAHH 325

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           + K++  +D  + V+G DH     +L    + +     Q++ ++   V L       KMS
Sbjct: 326 EWKFDT-YDRAVTVLGEDHKLQASQLRETLSLLGNDVDQLDNVIYSYVNLPEG----KMS 380

Query: 402 KRAGDFITLRHVVDE---------------------------------VGSDSVRFMMLW 428
            R G  + L  ++DE                                 VG  +VR+ ++ 
Sbjct: 381 TRRGTGVQLDDLLDEAIDRAREEVETRLGDRLRDDDLDEADVERIAEQVGIGAVRYDIVA 440

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           ++ S+ + F++ +  +   ++   YVQY +ARC  I  +A  + P+        +     
Sbjct: 441 KQPSKAITFEWDRALDFEAQS-APYVQYVHARCCGILDEADGLDPEATIAPLDTD----- 494

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                +E  L+  +A  P VIE+A    +P+K+A Y   LA  F+  +   RE P     
Sbjct: 495 -----AERDLLRTVARLPGVIESAADDHQPHKIATYTRRLADRFNTFY---RECPVT--- 543

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            A++ ++   RL LV A    + + L+I+GVE+P  M
Sbjct: 544 TADDAEVRRARLALVAAARHAMANALDILGVEAPESM 580


>gi|15594939|ref|NP_212728.1| arginyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915064|sp|O51540|SYR_BORBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2688523|gb|AAC66956.1| arginyl-tRNA synthetase (argS) [Borrelia burgdorferi B31]
          Length = 591

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 125/607 (20%), Positives = 238/607 (39%), Gaps = 74/607 (12%)

Query: 11  LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +K+ +  I   + +   I LD I I  ++P     G +S      + + L L    I+E 
Sbjct: 15  IKDEINVIVTNLALSNNIKLDNININIQKPPKSDLGDISI-LMFEIGKTLKLPIEIISEE 73

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I+  +K   ++ +V   G  ++N+ +S   Y+   +  +      YG +      K+ +E
Sbjct: 74  IIKNLKTKYEIKAV---GP-YLNIKISRKEYINNTIQMVNTQKDTYGTSKYLDNKKIILE 129

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           F S N   P+HVGH R  V+G++L+ ++   G ++T+   IND G  I    L+ + ++ 
Sbjct: 130 FSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICKSMLA-YKKFG 188

Query: 187 QALYNNDSDLPEGYYPGV-YLKHVGK----ELADKYSSELLNFPEEKW---LPIVKDYSV 238
             +    +     +  G  Y+K+       E A+K   +LL   E+K    + + K  + 
Sbjct: 189 NGITPEKAFKKGDHLIGDFYVKYNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNK 248

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A+ + I++  +  N   D    E +  +   + + + +     +G+ Y+          
Sbjct: 249 WAI-EGIKETYEITNTSFDKIYLESEIFKIGKNVVLEGL----EKGFCYKREDGAICIDL 303

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357
               D      +           + L++S+G+  Y   DL     +  E  F+ MIYV+G
Sbjct: 304 PSDSDEKADTKV---------KQKVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVG 354

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
           S+   + K L  VA  +   K +  + L   +    DG   KM  R G+ I   +++   
Sbjct: 355 SEQIQHFKSLFFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNL 411

Query: 416 -----------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   +   ++ + +L     + + F+  K       N   
Sbjct: 412 IELIIPEMTQKIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFN-KKESLSFTGNSGP 470

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+QY  AR  SI  + K         +     I  E      E ++I  ++E    I NA
Sbjct: 471 YIQYVGARINSILEKYKA------LSIPVMEKIDFELLKHEKEWEIIKIISELEENIINA 524

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                P  L  Y Y LA  F  ++        ++ +  NN  LT  R++ + A+   I +
Sbjct: 525 AKDLNPSILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKN 578

Query: 573 GLNIIGV 579
            + ++ +
Sbjct: 579 CMYLLNI 585


>gi|189502012|ref|YP_001957729.1| arginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|238692307|sp|B3ERZ8|SYR_AMOA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189497453|gb|ACE06000.1| hypothetical protein Aasi_0599 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 596

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 105/641 (16%), Positives = 236/641 (36%), Gaps = 101/641 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++N  + +  ++ +    L  + ++  R    G   T      +    + 
Sbjct: 1   MNIDLVLREAIQNAFQSVF-ELSIP---LADVNLQPTRKEFEGT-HTLIVFPFTTTCKVS 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IA  I   ++ +    + +   KGF+NL +  +      + +  +       L    
Sbjct: 56  PEVIANKIGDWMQTNTQAIASYNVVKGFLNLSIKDTIWLASFNQMYQNKHFGY--LPSNR 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ +E+ S N   P+H+GH R   +G  ++ ++  +GYEV +   +ND G  I   ++ 
Sbjct: 114 QKIVVEYSSPNTNKPLHLGHLRNNFLGHAVSEILQAAGYEVYKVNLVNDRGIHICK-SMV 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD----------------------KYS 218
            +  + +        L      G Y     +   +                      + +
Sbjct: 173 AYQHWGRGETPESRGLKGDQLVGKYYVKFDQVYKEQVAALTQTLGDAEQAAKQAPLLQEA 232

Query: 219 SELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             +L   E     ++  +               + L I  D    E   +       +++
Sbjct: 233 QVMLKQWEAGNEEVLALWRKMNGWVYDGFDITYQKLGITFDKVYYESQTYLLG----KEV 288

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +     +G  Y+                    +    T  G D ++ LL++DG+  Y   
Sbjct: 289 VAEGLAKGTFYKK---------------QDGSVWIDLTQEGLD-EKLLLRADGTSVYITQ 332

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRD 394
           DL     +Y+    + ++YV+G++   + + L  + A +    A  +  L   +V L   
Sbjct: 333 DLGTADLRYQDFKPNKLVYVVGNEQDYHFEVLAKIMARLGRPYATDLYHLSYGMVDLPTG 392

Query: 395 GMPIKMSKRAGDFITLRHVVDEV-----------------------------GSDSVRFM 425
               KM  R G  +    ++DE+                                ++++ 
Sbjct: 393 ----KMKSREGTVVDADMLIDEMIETAEEHTRELGKIDGFSKEEAKDLYHILAMGALKYF 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L     + L FD  +     + +   ++QY +AR  ++ R+ +        D+   +++
Sbjct: 449 LLRVDAKKRLLFDP-QASIDFQGDTGPFIQYTHARIAAVLRKVQQA------DIAFNDIV 501

Query: 486 PQESE-FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
            QE+      E ++IV LA +P+ ++ + +A  P  LA ++ ++A  ++  ++       
Sbjct: 502 EQENFVLHPLEREVIVELAAFPKKLQESALAYAPAILAQHVLEIAKAYNRMYA------E 555

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L  +   + K+ + R+QL   VA +I + ++++G+  P  M
Sbjct: 556 LSILHEQDTKVQLFRIQLSVLVAQVIKTVMHLLGIVVPERM 596


>gi|327355532|gb|EGE84389.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 635

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 114/621 (18%), Positives = 218/621 (35%), Gaps = 115/621 (18%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I+R +  AHG +    A +  +   +D   +A  + +++     + +    G  FI ++ 
Sbjct: 61  IQRTQVLAHGDVMVVVARLRLKGANVD--QVALDLSSKLCGISLISNPVPKGV-FIPIFF 117

Query: 94  SPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           S + L           R++     ++G++   N      KV +EF S N     H GH R
Sbjct: 118 SATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAGHLR 177

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++G  +A+L    G++V +  Y+ D G Q   LA+       + L+  +   P  +  
Sbjct: 178 STIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLAVGWQKFGSEELFQKE---PLKHLL 234

Query: 203 GVYLK----------------HVGKELADKYSSEL----------LNFPEEKWLPIVKDY 236
            VY K                  G++ ++  +  L          +   +   L + + +
Sbjct: 235 DVYAKINTLFKPEQEASKNARDNGQDTSEIENKGLYAERNAFFKKMEDGDPDALSLWRRF 294

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++ + IR     LNI  D +  E       P  I  +   L  +G +YE      ++
Sbjct: 295 RDISIERYIR-TYARLNIAFDEYSGESTVR---PETIESVEKMLKEKG-IYE------EN 343

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
           + +   D  +       T         +    G+ TY   D+A    +  +  FD MIYV
Sbjct: 344 EGSWVIDFKKHGARKLGTA-------VVRNRGGTTTYLLRDIAAVLERVGKYKFDKMIYV 396

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + ++   Y +R+      +        ++          G    MS R G    L  ++D
Sbjct: 397 VSAEQDSYFQRVFKTIEIMGYPDIATKLVHVNF------GKVQGMSSRLGTVKLLSDILD 450

Query: 416 E----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           E                            VG  +V    +  K      FD  ++    +
Sbjct: 451 ECGNAMHEVMRANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMTSF-E 509

Query: 448 ENPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            +   Y+QY++AR  SI R+A    D     DF L            +   + ++  +A+
Sbjct: 510 GDTGPYLQYSHARLCSIMRKAQLTADQVAKADFTLLK----------EPHAVDIVRLVAQ 559

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP +  +A    EP  +  YL+ L       +   +             ++ + R  L  
Sbjct: 560 YPDITSHAFKTLEPITVLTYLFRLTHQVSSAYDVIKVLGM-----NEGPEVMLARSALYE 614

Query: 565 AVASIINSGLNIIGVESPNEM 585
               ++ +G+ ++G      M
Sbjct: 615 GARQVLENGMRLLGFTPVARM 635


>gi|16120221|ref|NP_395809.1| arginine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169237481|ref|YP_001690685.1| arginine--tRNA ligase [Halobacterium salinarum R1]
 gi|23822206|sp|Q9HHN2|SYR_HALSA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|10584349|gb|AAG20944.1| arginine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167728708|emb|CAP15552.1| arginine--tRNA ligase [Halobacterium salinarum R1]
          Length = 631

 Score =  286 bits (733), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 133/654 (20%), Positives = 241/654 (36%), Gaps = 94/654 (14%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +  +    L   ++        + ++    I +E   D   G  S+  +  ++   G  P
Sbjct: 1   MLYNLRQELLAGIRAATSDAGYDYEVDQSAIELEDITDEEKGEFSSPISFSIAAAAGAPP 60

Query: 62  LTIAELIVARIKIDPDVDSVFIAG--KGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIG 118
           + +A  I    + +     V       G IN +   + L    LS+I+  G EYG     
Sbjct: 61  VDVAAAIADAHRSNGLPAEVEAVTVEGGHINYHADTTDLADATLSTILRDGSEYGTRTDA 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
               +  +  S N   P+HVGH R  ++ D + +++   G++VTR+ ++ D G Q   L 
Sbjct: 121 DPDTILADVSSPNIAKPLHVGHLRNTILSDAVMNILEARGHDVTRDNHLGDWGVQFGNLM 180

Query: 179 LSVFWRYQQA-LYNNDSDLPEGYYPG-----------VYLKHVGKELADKYSSE------ 220
                   +A L ++  +     Y                + V  + AD  + E      
Sbjct: 181 HEYTEFGDEATLEDDAIEHLLDLYQQFEQRDSMLADLEDDETVTDQFADAVTEERDYHAD 240

Query: 221 -------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPS 271
                   L   +E    + + +   ++ +  +     L++  D++  E  + +   +  
Sbjct: 241 SGKEWFTRLEQGDEDATALWERFRTVSIDR-FKQTYDDLDVAFDVWNGESFYAQEGWNDV 299

Query: 272 PIRDIIDN---LARQGY-----VYEGILPPPKSKTTQKCD--MDRKQLLFRSTMVGDDVD 321
            I   I+N   +  +G      VY               D  +DR + +  +    +D D
Sbjct: 300 IIEKAIENDVAMRGEGESVYIPVYPDDYENVGDPQAADVDASLDRARQMREANDDLEDAD 359

Query: 322 ---RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377
                ++KSDGS  Y   DLA  + + E    D  +YV+ ++ + Y ++L   A  +   
Sbjct: 360 FDPFYIVKSDGSTLYGTRDLATIEYRIEEYDADQSVYVVANEQNQYFQQLFVAARKMGYN 419

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------- 415
             ++  +   L+ L        MS R G  IT R V+D                      
Sbjct: 420 DIKLKHIDYGLISLPEG----SMSTRKGQIITAREVLDRAQDRAEEIIAEKGRIDDAEAQ 475

Query: 416 ----EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
               ++   ++++ M+  K      FD  +     + +   YVQYA  R  SI   A   
Sbjct: 476 SVATKIALATIKYEMVAAKRERDTTFDIDE-SVALEGDTGPYVQYAATRGYSILDGADAA 534

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D D          S F+ ++++L+  LA YP V+E      +   LA YL  LA V
Sbjct: 535 PEIDDLD---------PSVFNDTDVELLFELARYPLVLERCEERYDAAPLAHYLLQLAHV 585

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  +           + A N      RL L  A   I ++GL ++G++   EM
Sbjct: 586 FNSFYHKNA------VLDAENA--RTERLLLTKATTQIFDNGLGLLGIDVLEEM 631


>gi|261334106|emb|CBH17100.1| arginyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 692

 Score =  286 bits (731), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 118/709 (16%), Positives = 229/709 (32%), Gaps = 162/709 (22%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR-------PLGL 59
               +   +K     I         I+I   +         N AM L +       P+  
Sbjct: 14  LKEIVHRAIKRAFPSIN-----PPEILITLGKTTE---YQCNNAMGLVKLLSSASPPIKT 65

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  + E +   ++ +  ++S     +GFIN+ + P ++   +  ++  GI   R     
Sbjct: 66  SPALVGEELKKNLEENDMIESFEPTPQGFINITIKPMWVAGTVGKVLREGI---RPPNLP 122

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV ++F S N    MHVGH R  ++G+ +  L  F  YEV R  +I D G     L L
Sbjct: 123 KQKVLVDFSSPNIAKEMHVGHLRSTIIGEAICRLFEFCQYEVHRINHIGDWGTAFGMLIL 182

Query: 180 -------------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS- 219
                              + F+R  +  ++ D++  E     V      +E + K    
Sbjct: 183 FLRRKHPNFTEEVPNISDLTTFYREAKKCFDEDAEFKEQARLQVVKLQALEEESMKAWKI 242

Query: 220 -------------ELLNFPEEKWLPIVKDYSVQAMMKIIRD------------------- 247
                        E LN   E+      +  +  ++K++ +                   
Sbjct: 243 ICDISRKEFLQIYERLNVTIEERGESFYNPLIPEVLKLLDEAGKLVESNGAKITVLSDKK 302

Query: 248 --------DLKALNIQHDIFISED---DFHRGDPSPIRDI-IDNLARQGYVYEGILPPPK 295
                   D+  L   H ++  +D   +FH    + +R++ +                 K
Sbjct: 303 SISALDAKDMAKLAAPHLLWAGKDTRVEFHPNMITAMREVGVLKGEEGNETVALSKKDAK 362

Query: 296 SKTTQKCDMDRKQLL------------------FRSTMVGDD---------VDRPLLKSD 328
                    D  +L+                  F +  + D              ++KSD
Sbjct: 363 PLKNFDIRTDVDKLVSLLQPLFKNKMSPLFREVFEAAGIVDGEIITIPRFSFPLMIVKSD 422

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G YTY   D+A    ++     D ++Y        +++    +A  +             
Sbjct: 423 GGYTYDTTDVATMYHRFVLEKMDRVVYCTDVGQYEHLRMCADLAKDMGWMDKGTWSHAGF 482

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
            +    DG   K+  R+G+   L+ ++DE                               
Sbjct: 483 GLVTGADGK--KIKTRSGESAKLKDLLDEAVERSRAILEEREKGDRAQGHTKEDIDELSK 540

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  +V++  L +       F + K+ + S  N   ++ Y YAR  SI R+       +
Sbjct: 541 KIGIGAVKYFDLKQSRLNDYAFSYEKMLDLS-GNTAVFLLYQYARLCSIERKCG-----V 594

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D + F  + +  E+     E +L + +     V+         + L  + Y+L S F   
Sbjct: 595 DREQFLSSEVVIET---PQEKKLALCVLRMDSVVIRTVDDLLLHHLTDFAYELVSCFSDF 651

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + + +             +    RL LV      +   L+I+ ++   +
Sbjct: 652 FQNCKVIGH---------EQQNSRLCLVELTRLTLKQVLDILNIDVAEK 691


>gi|323463592|gb|ADX75745.1| arginyl-tRNA synthetase 2 [Staphylococcus pseudintermedius ED99]
          Length = 554

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/604 (17%), Positives = 218/604 (36%), Gaps = 86/604 (14%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F   +   L EI       ++I +  ++E P +  +G  S      L++     P  IA 
Sbjct: 2   FKKSIAKDLSEILKGQMTFEEIYN--ILEHPTNENYGEYSF-PTFQLAKIYKKSPNLIAN 58

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I  +   +  +    +   GF+N +L      + +            N +    K+ I+
Sbjct: 59  SIKGKFD-NEYIHKAEVVN-GFLNFFLDRQSSSQKIIECFNENT-LKNNKLLSAEKIVID 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185
           + S N   P  +GH R  V+GD++A ++  +G +V R  ++ D G Q   L ++   W  
Sbjct: 116 YSSPNIAKPFSMGHLRATVIGDSIAKILEANGAKVIRINHLGDWGTQFGKLIVAYKKWGE 175

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK--WLPIVKDYSVQAMMK 243
           Q+ + NN        Y   +         D  + E     E        +  +     M+
Sbjct: 176 QKRVENNPILELFHLYTKFHEISKDNPHIDLEAREAFKLLESGHSEYEHLWSWFRNVSME 235

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
                 K L+I  D    E  ++      +++ I  L  +  + +              D
Sbjct: 236 SFNALYKLLDINFDYIQGESFYNE----RLKETIQLLEERELLTQ-------DDGAYIVD 284

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           ++             D+   L+K  DG+  Y   DL+    + E      ++YV+G + S
Sbjct: 285 LE-------------DLPPALIKKRDGASLYITRDLSAVLYRTETFNPTRILYVVGQEQS 331

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
            + K+L+ +   +       ++    +++  +     KMS R G  I L  ++       
Sbjct: 332 IHFKQLDKLTRLLELTPVIEHIPFGLILKDGK-----KMSTRQGKVILLEDIIAEVEQAV 386

Query: 415 ------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                              E+   S++F  L        D    ++    + +   Y+ Y
Sbjct: 387 LRTLEKKKSNLRNKKEIAKEIAIASIKFHDLKNDRLSSYDLKIDEML-AFEGDTALYIMY 445

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            YAR +SI  + K             +    + +F+ S   ++ HL  Y  ++E + I  
Sbjct: 446 TYARIQSILGRTK-----------YSDDFKVDFQFEESMWPILNHLKSYNEILELSAINY 494

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P  +  Y   L  +F+ +++  R       +++ N K    ++ L+  V+  I   + +
Sbjct: 495 TPSSICRYSLQLCRLFNRYYNSER------ILESTNEK---SKITLLKIVSKNIEDSMEL 545

Query: 577 IGVE 580
           +G+ 
Sbjct: 546 LGIS 549


>gi|14601607|ref|NP_148147.1| arginyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|7674354|sp|Q9YB39|SYR_AERPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5105446|dbj|BAA80759.1| arginyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 644

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 129/662 (19%), Positives = 232/662 (35%), Gaps = 111/662 (16%)

Query: 9   SRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
           +RL   L     + + V++ +++R ++  P    +G L     M  +R         A+ 
Sbjct: 9   TRLHGILSSYLSEVLGVDRSVVER-LLAPPPRKEYGDLGFPL-MRFARSSNAS----ADS 62

Query: 68  IVARIKIDPDVDSVFIAGK----GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IV  ++       +  A      G++N+      L   +  ++ SG         +   +
Sbjct: 63  IVESLRGKLWERGITWASPTLEAGYLNIVFDVEKLGDEVFRLLASGWRPSTARTSRPETI 122

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E  SANP  P+H+GH R + +GD LA L+   G+ V R +Y++D G Q    +L    
Sbjct: 123 VVEHTSANPIHPLHLGHARNSSLGDALARLLEARGHRVNRRFYVDDVGRQAVVASLGFKL 182

Query: 184 -----RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---------LLNFPEEKW 229
                R   +      D   G+   V    +    A K             L    E   
Sbjct: 183 SGVTPRELASRMGVKVDHAVGWVYAVTHNALETVTARKRGDTSKVDEALSTLARLKERGD 242

Query: 230 LPIVKDY----------------------------------SVQAMMKIIRDDLKALNIQ 255
             +                                       V A+++  R+ L    + 
Sbjct: 243 REVFDRILEAVGSLDDPEGLVSEMMRKYERGEEPEKSLIRGVVSAVLEGFRETLGRFGVD 302

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----EGILPPPKSKTTQKCDMDRKQLLF 311
            D +  E D        +  II+   R  ++        L  P+                
Sbjct: 303 FDDWDWESDL--LWSGLVNKIIEEARRSPFLTTHKDAIALDIPRIVREVLARDPEAASTI 360

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV 370
           +     +     L++SDG+  Y   DLAY   K+   G D +I V+G+D      ++   
Sbjct: 361 KLPRSLEIPPLILVRSDGTTLYTTRDLAYSVYKFRVTGADRVINVIGADQRLPQLQIRLA 420

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------- 415
              +  ++  +N++  +   +   G   +MS R G+++TL  +++               
Sbjct: 421 LLGLGYRREALNMMHYDYEIVSLPGR--RMSSRRGEYVTLDELLEMAKARSVREVESRNP 478

Query: 416 ------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                       ++   +VRF ++     + +  D  ++ +  KEN   Y+QY YAR  S
Sbjct: 479 GADRDWIESTAEKIAVGAVRFALVRPGRLKPITLDVERILDL-KENTAPYLQYTYARASS 537

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I  +  +I      D    +    E   + S  +L V    +P V   A     P  LA 
Sbjct: 538 ILEKHGEI------DYLKAHPASLE---EGSRRELFVEALRFPLVSAKAADDLAPEDLAS 588

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL  LA +F+  +       +   +          +  LV  V S+I  GL ++GVE   
Sbjct: 589 YLLRLADMFNSWYQ------KDSVIHEEWEGARHAKAALVLLVKSVIGEGLRLLGVEPLE 642

Query: 584 EM 585
           +M
Sbjct: 643 KM 644


>gi|71754737|ref|XP_828283.1| arginyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70833669|gb|EAN79171.1| arginyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 692

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 118/709 (16%), Positives = 229/709 (32%), Gaps = 162/709 (22%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR-------PLGL 59
               +   +K     I         I+I   +         N AM L +       P+  
Sbjct: 14  LKEIVHRAIKRAFPSIN-----PPEILITLGKTTE---YQCNNAMGLVKLLSSASPPIKT 65

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  + E +   ++ +  ++S     +GFIN+ + P ++   +  ++  GI   R     
Sbjct: 66  SPALVGEELKKNLEENDMIESFEPTPQGFINITIKPMWVAGTVGKVLREGI---RPPNLP 122

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV ++F S N    MHVGH R  ++G+ +  L  F  YEV R  +I D G     L L
Sbjct: 123 KQKVLVDFSSPNIAKEMHVGHLRSTIIGEAICRLFEFCQYEVHRINHIGDWGTAFGMLIL 182

Query: 180 -------------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS- 219
                              + F+R  +  ++ D++  E     V      +E + K    
Sbjct: 183 FLRRKHPNFTEEVPNISDLTTFYREAKKCFDEDAEFKEQARLQVVKLQALEEESMKAWKI 242

Query: 220 -------------ELLNFPEEKWLPIVKDYSVQAMMKIIRD------------------- 247
                        E LN   E+      +  +  ++K++ +                   
Sbjct: 243 ICDISRKEFLQIYERLNVTIEERGESFYNPLIPEVLKLLDEAGKLVESNGAKITVLSDKK 302

Query: 248 --------DLKALNIQHDIFISED---DFHRGDPSPIRDI-IDNLARQGYVYEGILPPPK 295
                   D+  L   H ++  +D   +FH    + +R++ +                 K
Sbjct: 303 SISALDAKDMAKLAAPHLLWAGKDTRVEFHPNMITAMREVGVLKGEEGNETVALSKKDAK 362

Query: 296 SKTTQKCDMDRKQLL------------------FRSTMVGDD---------VDRPLLKSD 328
                    D  +L+                  F +  + D              ++KSD
Sbjct: 363 PLKNFDIRTDVDKLVSLLQPLFKNKMSPLFREVFEAAGIVDGENITIPRFSFPLMIVKSD 422

Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G YTY   D+A    ++     D ++Y        +++    +A  +             
Sbjct: 423 GGYTYDTTDVATMYHRFVLEKMDRVVYCTDVGQYEHLRMCADLAKDMGWMDRGTWSHAGF 482

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
            +    DG   K+  R+G+   L+ ++DE                               
Sbjct: 483 GLVTGADGK--KIKTRSGESAKLKDLLDEAVERSRAILEEREKGDRAQGHTKEDIDELSK 540

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  +V++  L +       F + K+ + S  N   ++ Y YAR  SI R+       +
Sbjct: 541 KIGIGAVKYFDLKQSRLNDYAFSYEKMLDLS-GNTAVFLLYQYARLCSIERKCG-----V 594

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D + F  + +  E+     E +L + +     V+         + L  + Y+L S F   
Sbjct: 595 DREQFLSSEVVIET---PQEKKLALCVLRMDSVVIRTVDDLLLHHLTDFAYELVSCFSDF 651

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + + +             +    RL LV      +   L+I+ ++   +
Sbjct: 652 FQNCKVIGH---------EQQNSRLCLVELTRLTLKQVLDILNIDVAEK 691


>gi|268325386|emb|CBH38974.1| arginyl-tRNA synthetase, N-terminus [uncultured archaeon]
          Length = 507

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 137/536 (25%), Positives = 228/536 (42%), Gaps = 68/536 (12%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           +F +F + ++  LK+     + +   L    +E      H  +++  A  L+R     P 
Sbjct: 1   MFLEFKAEVEKVLKQALASYEYKDLEL----VE----SEHADIASTVAFSLARVYKRAPK 52

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            IAE IV  +  +  + S  +A   +IN Y+S  +L K L   + +G+E    +     K
Sbjct: 53  EIAEDIVNHLPAELTLISHAVATGPYINFYVSDFFLHKTL-QRLRAGLE---TVEKNKGK 108

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + IE  SAN  GP+H+GH R A++GD LA ++  +G++V  +YY+ND G QI        
Sbjct: 109 IIIEHTSANADGPLHIGHLRNAIIGDVLARVLKRAGFDVETQYYVNDLGRQIAVAVWGAG 168

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQA 240
                A    D  + + Y           E  +    EL+   E      VK Y   V  
Sbjct: 169 RMALAADKKADHAVADVYIAANRELEEHSEYLNAV-EELMRKYEAGDDATVKRYETVVNT 227

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +++ LK LNI+HD+F+ E +F R     +  +++ L ++G V              
Sbjct: 228 CLTGVKETLKRLNIKHDLFVLEGEFVR--SGAVDAVVNELMQKGDV-------------- 271

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
              +D   LL +  + G + +  + +SDG+  Y   DLAY + K  R  D MI V G DH
Sbjct: 272 --KLDGTALLLQ--LEGIEKELVIKRSDGTSLYTTRDLAYHRWKSNR-CDRMIDVFGKDH 326

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-------------RDGMPIKMSKRAGDF 407
               ++L    A +S K      ++   V L               D +  K+ +RA + 
Sbjct: 327 ELVSQQLTKALALLSVKAP--EYVIFAFVSLLSGSLSTRAGRYISADELIEKIEERAYEA 384

Query: 408 ITLR----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           +  R           +   VG  ++R+ M+     + + FDF    +  K+    +VQYA
Sbjct: 385 VEKRRDDLDEVKKPEIARMVGIGALRYDMVKVSPDKHIVFDFDDALDIEKKG-APFVQYA 443

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +AR  SI R A       D      +V       + SEL+LI  L+++  +I    
Sbjct: 444 HARACSILRAAAAKGALTD------DVYDSALLREDSELELIKMLSKFEYLIAGVA 493


>gi|320334541|ref|YP_004171252.1| arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755830|gb|ADV67587.1| Arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 613

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 120/649 (18%), Positives = 224/649 (34%), Gaps = 106/649 (16%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D  ++LK  ++     +  +   ++ ++ E P     G   T AA +L++ L  +P   A
Sbjct: 2   DVKAQLKAAVEAAARTLGAD---IEAVIQETPP-GKPGDYGTPAAFLLAKSLRGNPAAFA 57

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
             + + I++   +      G  ++N ++        + + V S +E       +  K+ I
Sbjct: 58  AQLASTIELPSGIARAEAMGP-YLNFFVD-------VGTFVRSIVEDTATPEAQSGKIVI 109

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFW 183
           E  S NP   +HVGH R  V+GD++A +   +GY V  + YI+D G Q      A   + 
Sbjct: 110 EHTSVNPNKELHVGHVRNVVLGDSMARIFRAAGYPVEVQNYIDDTGRQAAESLFARDHYG 169

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R        D  + EG Y  +       +L    S+ +      +    V+   +  +  
Sbjct: 170 RVWDGQQKYDHWMGEG-YVRLNADPQKADLEPGISAIMHRLEAGELRGEVERIVLAHL-- 226

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              D    L  ++D+   E D        +   ++ L    Y                  
Sbjct: 227 ---DTCHRLGARYDLLNWESDVV--GSGFLSKAMNILQGSSYTSHPTDGKYAGAFVMNVA 281

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY------------------ 345
                L        ++ +  L++SDG+  Y A D+ Y   K+                  
Sbjct: 282 AFMPGL--------EESNVVLVRSDGTAMYAAKDIGYQFWKFGLFEGMKFKPFTTDPEGK 333

Query: 346 -------------ERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
                        ER F +   +I V+ S      + ++A          +   +     
Sbjct: 334 TVWTSAPDGEVDGERRFAHAYEVINVIDSRQEHPQRVVKASLGVAGHPDEEARSIHLSYA 393

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------------V 417
            +  +G    +S R G  ++   V+DE                                +
Sbjct: 394 FVTFEGQT--ISGRKGGAVSADAVMDEATQRARALFVEKEGQSSRETVSADEAQEIARRI 451

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G  ++RF M+  + +  +DF + +     + +   YVQYA  R  +I ++A       D 
Sbjct: 452 GLGALRFAMMRNEPTRQIDFRWEQALTL-QGDTAPYVQYAAVRAGNILKKAAAEGYVSDG 510

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                  +            L   +   P VI  A     P+ +A Y  DLA  F+  ++
Sbjct: 511 AGADWAQLTDLDLT------LAKTVMRLPEVIGTAVRVHSPHVVAAYALDLAGAFNSWYN 564

Query: 538 H-GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               E      V A+       RL LV  + +     L+++G++ P+ M
Sbjct: 565 AKTPEGKAATNVLASPAGQREARLALVRKLRATFEETLDLLGIQVPSAM 613


>gi|124028037|ref|YP_001013357.1| arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978731|gb|ABM81012.1| Arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 661

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 130/669 (19%), Positives = 244/669 (36%), Gaps = 114/669 (17%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +  ++  L   D  ++++ + ++ IV E P +   G      A   ++   +    + E
Sbjct: 17  LARAIREALSSFD--VEIDGREVEYIVYESP-NPELGDYGVPLA-RFAKKYRVGIGELVE 72

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV-SGIEYGRNLIGKGTKVNI 125
            +   +     V  V    +G++N+ L+ +   K++ +     G  YG     K  ++ I
Sbjct: 73  KVKQVLAGSTIVKDVLFV-RGYLNIKLNAAEAAKLIFNAARLDGESYGIIKTDKPMRIVI 131

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR- 184
           E  SANP  P+H+GH R A +GDTLA ++   G+ V   +YIND G Q+  +A       
Sbjct: 132 EHTSANPVHPLHIGHARNASLGDTLARMLRARGHVVQTRFYINDLGRQVAVMAYGYIAGG 191

Query: 185 ----------------------------------YQQALYNNDSDLPEGYYPGVYLKHVG 210
                                              +     +D    E       L    
Sbjct: 192 FEEPPPGIKPDHWIGAIYAITHTLADIEEVKRQVEEAKASGDDERYRELLRKLDSLVADA 251

Query: 211 KELADKYSSELLNFPE--------------------EKWLPIVKDYS--VQAMMKIIRDD 248
             L ++Y        E                     +   IV+     V+  ++  R+ 
Sbjct: 252 ARLREQYPDIFDKISEAVRGRDVGAEISRLMRVYEYRENEEIVRKVRRVVELCLEGFRET 311

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDR 306
           L  L I+ D++  E D        +  I++   +  Y   Y+G          +   +  
Sbjct: 312 LSKLGIEFDVWDWESDL--AWSGMVSKILEEARKSPYATTYKGAFALNLKPVLRDPIVRS 369

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
              +       D     L +SDG+  Y   D+AY   K+ E   D +  V+ ++      
Sbjct: 370 ---VLGLPEDYDVPPLILQRSDGTTLYTTRDIAYSIKKFREFNADKVYNVIAAEQRLEQL 426

Query: 366 RLEAVAAAVSEKKAQINVLLC--ELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416
           ++     A+  ++  +N +    E+V L       KMS R G ++TL  +V++       
Sbjct: 427 QVRLALIALGYRREGLNTIHYAYEMVNLP----GQKMSGRRGRYVTLDELVEQAIRVARE 482

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               VG  ++R+ ++     + + FD  +     + N   Y+ Y
Sbjct: 483 EVEKRSPHLSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFER-NSAPYIMY 541

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI  +A +    LD++        +          LI+    YP +   A    
Sbjct: 542 AHARASSILSKAAERGISLDWESIEYAAAEENQLR----RSLILLALSYPYIFAKAADEL 597

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +P  +  +L  LA +F+  ++ G        V   ++   M +L +V+ V +I+ SGL +
Sbjct: 598 KPELIVAFLNKLADLFNKWYASGD-----SVVNEPDKGKQMFKLAMVYTVKNIVASGLRL 652

Query: 577 IGVESPNEM 585
           +G+E    M
Sbjct: 653 LGIEPIERM 661


>gi|258615933|ref|ZP_05713703.1| arginyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 472

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 99/491 (20%), Positives = 191/491 (38%), Gaps = 62/491 (12%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K+ + +       +   L+++  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KDLVAKAVYDAVKDDLTLEQVEQLLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + K  L ++V     YG + IG    V I+  
Sbjct: 63  EKID-SANFEKIEVVGP-YLNFFMNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++  +M   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKI 244
           A+       P      +Y++    E+A+      LN     W   +++    ++Q     
Sbjct: 181 AVKAE----PINELLRLYVQF--HEVAETEPE--LNEEARAWFKRLEEGDKEAIQLWQWF 232

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + +K  N  +D+     D   G+      + +I+  L  +  + E        K  + 
Sbjct: 233 RDESMKEFNKIYDLLEVRFDSLNGEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEI 285

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
            D+    L              + KSDG+  Y   DLA    +     F   +YV+G++ 
Sbjct: 286 VDLSAYDL----------NPALIKKSDGATLYITRDLAAALYRKRTYDFKQSLYVVGNEQ 335

Query: 361 SGYVKRLEAVAAAVSEKKAQINVL----------------------LCELVRLYRDGMPI 398
           S + K+L+AV   +    +                           L E++         
Sbjct: 336 SYHFKQLKAVLKEMGFDWSDDMHHIPFGLITQGGKKLSTRKGKIVLLEEVLNEAIQSAKE 395

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ++S++  D      V  +VG  +V F  L        DF+  +V     E    YVQY +
Sbjct: 396 QISEKNPDLENKDAVAKQVGVGAVIFHDLKNDRLNTFDFNLEEVVRFEGE-TGPYVQYTH 454

Query: 459 ARCRSIFRQAK 469
           AR  S+  +A 
Sbjct: 455 ARAVSLLEKAG 465


>gi|261749271|ref|YP_003256956.1| arginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497363|gb|ACX83813.1| arginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 586

 Score =  284 bits (727), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/634 (18%), Positives = 244/634 (38%), Gaps = 97/634 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    DF S ++  +++    I     +  R+  + P+    G ++      LS+ L   
Sbjct: 1   MN--EDFPS-IEGTIRK-SISILYRLDLCPRLDFQYPKKEHLGDITF-VLFSLSKILKKP 55

Query: 61  PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
              I + I   +K     + S  I G GF+N     SY   +L +++       +     
Sbjct: 56  VEKIGKDIGNYVKDQLKGLISFSIVG-GFLNFIFKDSYYLYLLINMLNKNFYDLK---LS 111

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + IE+ S N   P+H+GH R +++G +L+ ++   GY+ T+   IND G  I    +
Sbjct: 112 DKNIMIEYSSPNANKPLHLGHIRNSLIGYSLSEILKMVGYKTTKIQIINDRGIHICKSMI 171

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL-LNFPEEKWLPIVK---- 234
           + +    +    +   +   ++ G Y     K   ++       N   + ++PI+K    
Sbjct: 172 A-WKELGKGESPDRVGMKGDHFVGKYYNLFDKIYCEEIQKFSQKNKNNQNYIPILKKTRN 230

Query: 235 --------DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   D   + + K +        ++  K L I  D    E D +       ++II 
Sbjct: 231 LLKKWESGDPETRNLWKRMNKWVYDGFKETYKKLGIIFDQVEYESDVYEIG----KNIIK 286

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
              ++G  ++                    +       G D  + LL+SD +  Y   D+
Sbjct: 287 EGFKKGIFFQK---------------KDGSIWVDLIKEGFD-QKLLLRSDETSVYITQDI 330

Query: 339 AYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDG 395
                ++ +    D +IY++G +   + K L  +   +      ++  L   +V L    
Sbjct: 331 GTAVERFRKYDDIDQLIYIVGKEQDYHFKVLFTILKRLGYIWVKKLTHLSYGMVDLPSG- 389

Query: 396 MPIKMSKRAGDFITLRHVVDE------------------------VGSDSVRFMMLWRKN 431
              +M  R G+ I    ++ E                        +G  ++++  L    
Sbjct: 390 ---RMKSRKGNIIDADSLISEMSSIVKKNFLKDFPKEEQEKYAEIIGVGAIKYHFLQVDP 446

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            + + F   K  +  K     Y+QYAY+R RSI R+    +     D          ++ 
Sbjct: 447 KKRILFYPDKSIDL-KGKTGPYIQYAYSRIRSIERKFTFFYSLTHKDFSN-------AKL 498

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E ++I  L +YP +++ +     P  +A Y+Y++A +F+  + + R    L  + +N
Sbjct: 499 NIHEKKMIKILQKYPLILKKSARDLNPSLVANYIYEVAKIFNHLYQNTRVINPLDIIHSN 558

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + ++H   +I+ SG+N++G++  + M
Sbjct: 559 IC------MNIIHVTGNILKSGMNLLGIKMLDRM 586


>gi|302658722|ref|XP_003021062.1| hypothetical protein TRV_04838 [Trichophyton verrucosum HKI 0517]
 gi|291184938|gb|EFE40444.1| hypothetical protein TRV_04838 [Trichophyton verrucosum HKI 0517]
          Length = 636

 Score =  283 bits (724), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 125/597 (20%), Positives = 210/597 (35%), Gaps = 110/597 (18%)

Query: 46  STNAAMIL----SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--- 98
           +TNA ++L     +  G++P  +AE IV++      +     A   FI L   P  L   
Sbjct: 67  ATNADLMLITARLKLKGINPKQLAEDIVSKFPSTSLLSQP-TANGIFIPLSFCPDTLPKL 125

Query: 99  --------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
                   R    S  + G+    +      KV IEF S N     H GH R  ++G  +
Sbjct: 126 ILPFIFDRRASYGSNPLQGLRDPHDQSSGKKKVIIEFSSPNIAKEFHAGHLRSTIIGAYI 185

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++L    G++V +  Y+ D G Q   LA+       + L+  +   P  +   VY K   
Sbjct: 186 SNLYESMGWDVVKVNYLGDWGKQFGLLAVGWQRFGSEELFTKE---PLKHLLEVYAKINS 242

Query: 211 KELADKYSSELLN--------------FPEE-KWLPIVKDYSVQ--AMMKIIRD------ 247
               +K +SE                 F E   +   ++D      A+ K  RD      
Sbjct: 243 LFAPEKEASEQARDRGEDTSEIESKGLFAERNAFFQKMEDGDPDAIALWKRFRDVSIERY 302

Query: 248 --DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 LNI+ D++  E        S +      L  +G          +   T   D  
Sbjct: 303 ISTYARLNIKFDVYSGESTV---KVSTVEKAEALLKEKG-------VYTEDNGTWIIDFK 352

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
           +      +  +G  V R  +   G+ TY   D+A    + E+  FD MIYV+ ++   Y 
Sbjct: 353 KHG----APHLGVAVARTRI---GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYF 405

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
           +RL      +        +           G  + MS R G    L  ++DE        
Sbjct: 406 QRLFKTIELMGYTDVAAKLEHINF------GKVMGMSSRLGTVKILSDILDECGSAMHDV 459

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G  +V    +  K      FD  K+    + +   Y+QY
Sbjct: 460 MRKNPAKYEQIENPAEVADTLGITAVMVQDMAGKRIHNYPFDIAKMTSF-EGDTGPYLQY 518

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+AR  SI R+       +D D             +   + ++  +A+YP V  NA    
Sbjct: 519 AHARLCSIVRK-------VDIDPKEITTANFSLLKEPHAINILRLMAQYPDVTCNAVKTL 571

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           EP  +  YL+ LA      +        ++ + A + ++T+ RL L      ++ + 
Sbjct: 572 EPTTILTYLFRLAHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENA 622


>gi|67587705|ref|XP_665270.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis TU502]
 gi|54655858|gb|EAL35040.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis]
          Length = 505

 Score =  282 bits (723), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 99/525 (18%), Positives = 192/525 (36%), Gaps = 82/525 (15%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++      K  KV ++F S N    MHVGH R  ++GDT + ++ + G+EV R  ++ D 
Sbjct: 11  KFHCKSGRKTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTSRILEYLGFEVLRVNHVGDW 70

Query: 171 GAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G Q   L   +   Y   + N    SDL E Y           +   +    ++      
Sbjct: 71  GTQFGMLIEYLKEEYPTFVENLPEISDLQEFYKNSKKRFDTDPQFKLRSQQNVVKLQGGD 130

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYV 286
              ++   + + + ++ R + + +  +  + + E    ++      I  ++  L  +G +
Sbjct: 131 QDALI---AWKKICEVSRVEFQKIYDRLGVRLEEFGESYYN---DMIPGVVKMLDEKGIL 184

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-Y 345
                         K D   + +  +      ++    +KSDG Y Y + DLA    +  
Sbjct: 185 --------------KLDNGAQCVYTKIN----EIPLMAVKSDGGYGYDSTDLAAIHHRLI 226

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               D ++Y        +  +L  VA  +         L      + +     K   R+G
Sbjct: 227 TLDADWVVYTTDMGQEEHFMKLFDVAETMGWHDPSNTRLFFIGFGVIQGEDGKKFKTRSG 286

Query: 406 DFITLRHVVDE----------------------------------------------VGS 419
           D + L  ++DE                                              +G 
Sbjct: 287 DVVKLTELIDEGVARAKKELVDRRNQRRSDQTIKSNTDVEVDHPDIDDSNLDLMANTIGH 346

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++++  L +       F F ++ +  K N   Y+ YAYAR  +IFR+ + I  D +  +
Sbjct: 347 AAIKYFDLKQNRLTNYRFSFDRMLD-PKGNTAVYLLYAYARICAIFRKVEFIQSDDNMVI 405

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             +    +    +  E +L + L  +P V +       P +LA Y Y+L+  F   ++  
Sbjct: 406 KQKVSNFKLKISNNVERKLSIQLLRFPEVFDGILNDFFPNRLADYCYELSESFAQFYTEC 465

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           R       +    ++L   RL L      I+  GL+++GVE+  +
Sbjct: 466 R------IIGLEEQQLEQSRLLLCFLTKQILLKGLDLLGVETLEK 504


>gi|42781301|ref|NP_978548.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42737223|gb|AAS41156.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 433

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 179/480 (37%), Gaps = 79/480 (16%)

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH R  ++G++L  +    GYEV    YI D G Q   L  +         + N++ + 
Sbjct: 1   MGHLRSTMIGNSLKHIAEXCGYEVVGINYIGDWGTQFGKLITAY------KKWGNEAVVK 54

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNI 254
           E     ++  +V      K + EL       W   ++   + +V+       + LK  + 
Sbjct: 55  EDPIRELFKLYVQFHEEVKDNEELEEEG-RAWFKKLEEGDEEAVELWNWFRHESLKEFSR 113

Query: 255 QHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +++   E    +G+    + + D I+ L     + E                    L+ 
Sbjct: 114 IYELLGVEFTNFQGEAFYNNLMEDFIEILEEHDLLEES----------------EGALVV 157

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
                G      + KSDG+  Y   DL     +     FD  +YV+G + S +  +   V
Sbjct: 158 NLEEEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYAFDKALYVVGPEQSLHFNQFFTV 216

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +        +       + +DG   KMS R G  I L  V++E              
Sbjct: 217 LKKLGYTWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEAIDLAKQNIEEKNP 273

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      VG  +V F  L  +    ++F    + +   E    YVQY +AR  SI 
Sbjct: 274 NLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYVQYTHARACSIL 332

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+    F    F L            D     ++  L ++P++IE A    EP  ++ Y+
Sbjct: 333 RKESVEFETCTFALK-----------DDYSWSVVKFLNKFPQIIEAAFNKNEPSIISKYI 381

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            D+A  F+ ++ + R             K    RL LV+AV  ++  GL ++GVE+P EM
Sbjct: 382 LDVAQSFNKYYGNVRIL--------EESKEKDSRLALVYAVTVVLKEGLRLLGVEAPEEM 433


>gi|170052266|ref|XP_001862144.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167873169|gb|EDS36552.1| arginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 557

 Score =  282 bits (721), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/522 (20%), Positives = 185/522 (35%), Gaps = 80/522 (15%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            R      V+  +   R       K  +EF S N   P H GH R  ++G+ LA+L    
Sbjct: 82  YRNRFVHEVLGNLSLERKSPANPPKTLVEFSSPNIAKPFHAGHLRSTIIGNFLANLYDHL 141

Query: 158 GYEVTREYYINDAGAQINTLALSVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           G++V R  Y+ D G Q   L L V  +    +    N    L E Y           EL 
Sbjct: 142 GHDVVRLNYLGDWGTQFGYLKLGVDLKGLSREDIRRNPIESLYEAYVYAYGKAEDSPELQ 201

Query: 215 DKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           D+               L    D+     +  ++   + L  + D +  E  +   D S 
Sbjct: 202 DRARQIFSELENGTFSELDTWSDFR-SYTVDELKQVYERLGTRFDQYHWESQYGVKDISH 260

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +            + E  +   +    +   +  + +             P++KSDG+  
Sbjct: 261 V---------INLLREQKVLVTQEDGRKVVKVGNRNV-------------PIVKSDGTTL 298

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   D+A    ++ R  FDN  YV+ +  S +   L ++A        Q+N+     +  
Sbjct: 299 YLTRDVAALMDRFGRFRFDNAFYVVDNSQSDHFSALMSIAQ-------QLNLSYAASISH 351

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVR 423
            + G  + MS R G  + L+ ++DE                            +G+ +V 
Sbjct: 352 VKFGRVLGMSTRKGTVVFLKDILDEAEAQMKQKQLNTKTTKSNALNNPKVATILGTTAVV 411

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
              L ++ +   DF + +   QS  +    +QY + R  S+ + A +          P  
Sbjct: 412 VNDLKQRRTRDYDFSWDRAL-QSDGDTGIKLQYTHCRLSSLEKNAAEQ---------PAI 461

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
               E   +   L L+  L ++  V+  A   +E   L  YL+ L +         R   
Sbjct: 462 ECKPELLPEPEALALVCELVKFEDVLAEAAERREACILVNYLFGLCNA------TSRALQ 515

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L  +   +++  + RL L  A    +  G+ I+G+E   EM
Sbjct: 516 TLHVMNEPSQERRLQRLLLFGATRKTLRRGMEILGLEPLEEM 557


>gi|197294584|ref|YP_001799125.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853911|emb|CAM11874.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 557

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/611 (17%), Positives = 238/611 (38%), Gaps = 80/611 (13%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L  +   +++  LK++  +        D  + E+  +      S       ++   L+
Sbjct: 1   MTL-ENIKIKIEKTLKKLLNE--------DVFLQEQVNNYDF-DFSLPL-FAYAKKQKLN 49

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I + I   +    +++ +     GF+N+ L    + K +   +        +   K 
Sbjct: 50  PALIFKNIEKELIKTEEIEEIMFLN-GFLNIKLKRKLVAKNILLEINRLQSNYGDQPNKN 108

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N      VGH R  V+G+ L ++    G++V    ++ D G Q   + ++
Sbjct: 109 KTVVIDYSSPNIAKNFSVGHLRSTVLGNALKNIYQKLGFKVIGINHLGDWGTQFGKMIVA 168

Query: 181 V--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDY 236
              + + ++ L +  ++L + Y          + L D+ +   L   +  +++L + K +
Sbjct: 169 YQKWGQKEKILKDPINELQKLYLLFHQKAEENQTLNDEANEAFLQLEKKNKEYLELWKYF 228

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++ +  +   K L +  D F+ E  ++      I+++++ L ++  + +        
Sbjct: 229 RDVSLNEFCKI-YKILGVSFDYFLGESFYN----DQIKELLEELHQKKLLKQ-------- 275

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                   + K LL     +   +   + K++GS  Y   DLA  K +Y+      ++YV
Sbjct: 276 --------EEKMLLIELDQLPPGL---IQKTNGSTLYLTRDLATLKYRYKTYNCQTILYV 324

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVL---------------------LCELVRLYRD 394
           +G++   Y K+L+ +   +      I  +                     L +++    +
Sbjct: 325 VGNEQKLYFKQLDQIIKKMGYHDVTIENINFGLVLMDGKKISTRHHKFTTLMDVINQATN 384

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                + ++      ++    ++   ++ F  L       +DF+   +  Q K     Y+
Sbjct: 385 LAEKIIQEKNPSLTNIKETAQKIAVGAIIFNDLKNDRHLDIDFNLENIL-QFKGQTAPYL 443

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY  AR  S+ ++       +DF L   N+  Q   F      LI  L+++P ++E +  
Sbjct: 444 QYTAARLNSLLKK-----EKIDFQLIDENIYQQNHYF-----ALIKLLSQFPWILEKSQK 493

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            + P  L+ +L  +    +G ++  R     + ++  N       L L+ AV  +I   L
Sbjct: 494 EKMPSILSRHLIKITQNVNGLYAQERILSHDKIIKNTN-------LLLIKAVLIVIKESL 546

Query: 575 NIIGVESPNEM 585
            I+G+     M
Sbjct: 547 RILGIPFLESM 557


>gi|302543493|ref|ZP_07295835.1| arginine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461111|gb|EFL24204.1| arginine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 601

 Score =  280 bits (717), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 102/532 (19%), Positives = 196/532 (36%), Gaps = 82/532 (15%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L A    R+ + L     +      +L        R         N  + L++ L  +P 
Sbjct: 7   LAASVHQRVADALTAALPEAGSADPLL--------RRSDRADFQANGMLALAKQLKGNPR 58

Query: 63  TIAELIVARIKI-------DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            +A  +V R+ +       D  +  + ++G GF+N+ ++ S +   L++        G  
Sbjct: 59  ELAGKVVERLPVAPSSADPDSVIADIEVSGPGFLNITVADSAITATLAARAADD-RLGVP 117

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                    I++   N    MHVGH R AV+GD +  ++ F+G +V R ++I D G Q  
Sbjct: 118 FAADAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVKILEFTGEKVIRRHHIGDWGTQFG 177

Query: 176 TLALSVFWRYQQALYNNDSDLPEG-------YYPGVYLKHVGKELADKYSSELLNF--PE 226
            L   +     +  + + +   E        Y     L     E  D+    +++    +
Sbjct: 178 MLIQYLIEHPHELDHKDAASGEEAMSNLNRLYKAARALFDSDTEFKDRSRRRVVDLQAGD 237

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E+ + + + +  ++ +       K  + +     + E  ++      + +    L   G 
Sbjct: 238 EETIALWRKFVDESKIYFYSVFEKLDIEVHDPDVVGESGYN----DMLAETCRLLEESGV 293

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSDGSYTYFAADLAYFK 342
                              +    +F   + G D   V   + KSDG + Y A DL+  +
Sbjct: 294 A---------------VRSEGALCVFFDDVKGPDGNPVPLIVQKSDGGFGYAATDLSAIR 338

Query: 343 CKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKM 400
            + +    D ++YV+ +  S + K +   A  +     +++ V L     L +DG P K 
Sbjct: 339 DRVQNLQADTLLYVVDARQSLHFKMVFETARRIGWLNEKVHAVQLAFGTVLGKDGKPFK- 397

Query: 401 SKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKN 431
             R G+ + L  ++DE                             VG  +V++  L    
Sbjct: 398 -TREGETVRLEDLLDEASERAAAVVREKSEKLGLTEAEILERGGQVGIGAVKYADLSTSA 456

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           S    FD  ++   + +  V Y+QYAYAR +SI R+A +    +     P  
Sbjct: 457 SRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRRADETQSPVPHPELPLA 507


>gi|148927123|ref|ZP_01810752.1| Arginine--tRNA ligase [candidate division TM7 genomosp. GTL1]
 gi|147887417|gb|EDK72862.1| Arginine--tRNA ligase [candidate division TM7 genomosp. GTL1]
          Length = 530

 Score =  279 bits (715), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/571 (19%), Positives = 208/571 (36%), Gaps = 63/571 (11%)

Query: 37  PRDCAHG-HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           P +   G   +       +      P  IA+ + A ++    ++    A  GF+N+ L  
Sbjct: 1   PANPRFGADFAI-PCFSYAAQKKHSPAEIAKELAAGLR-HSAIEKTE-AVSGFVNIRLKS 57

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
             L +   S              K   V  E+   NP   +H GH    +VGD++A+L+ 
Sbjct: 58  PVLTEAALS-----APEFTPESYKDKVVVAEYSDPNPFKVLHAGHLYTTIVGDSIAALVE 112

Query: 156 FSGYEVTREYYINDAGAQINTLALSVF----WRYQQALYNNDSDLPEGYYPGVYLK-HVG 210
            +G  V R  Y  D G  +     S+       Y + L    +     +    Y++    
Sbjct: 113 AAGARVHRINYGGDVGLHVGRAMWSIIRHLGGEYPEKLREVSTHERASWVSRRYVEGTTA 172

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            E  DK  +E++   +  +  + +D   ++    +    +  +     +   D  +  D 
Sbjct: 173 YETNDKAKAEIVEINKRVY-KLHEDNDHESSFAEVYWTCRQWS-----YDGFDAMY--DR 224

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             I              +GI    +       +      +F++   G    R  L SDG 
Sbjct: 225 LQITPFEAYWPESKVTPKGIEIVQQGLKDAIFEESNGATIFKAEEYGLH-TRVFLNSDGI 283

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            TY A DL     K++   FD  I +  +D   Y+K +         + A+ +  L   +
Sbjct: 284 PTYEAKDLGLAALKWQTFHFDKSIIITANDIVDYMKVVLKALEHFYPEVAERSTHLTHGL 343

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS---------------VRFMMLWRKNSEL 434
                G   KMS R G+ +    +++     +               V++  L ++    
Sbjct: 344 IKLPGGK--KMSSRKGNTLLAADILEAAAEAATNSTIDESHGTVLAAVKYAFLKQRIGGD 401

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + ++  +     + N   Y+QYA+AR   I R+A+            +++    +  D +
Sbjct: 402 IVYEPEESVSL-EGNSGPYIQYAHARACGILRKAQ------------KSIEVSITTLDET 448

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E +L   + +YP V+        P+ +  YLY+LA  F+  +   R       V +    
Sbjct: 449 ERELARKIGQYPTVLTETVDTLRPHHICTYLYELAQAFNRFYEKSR------IVGSEREA 502

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               RL LV A A ++ +GL ++ + +P  M
Sbjct: 503 E---RLMLVRAYAGVLKNGLAVLRITAPERM 530


>gi|170289840|ref|YP_001736656.1| arginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|229470717|sp|B1L3E4|SYR_KORCO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|170173920|gb|ACB06973.1| arginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 632

 Score =  279 bits (715), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 132/654 (20%), Positives = 255/654 (38%), Gaps = 109/654 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLST---NAAMILSRPLGLDPLT 63
           F+  +   L+++    +        I + R R       ++        +++ L LDP  
Sbjct: 13  FAEEVNRVLRDLGSATR-----FSPIQVSRVRK----DYASYGLPVGFKVAKDLNLDPER 63

Query: 64  IAELIVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            A+ ++ RI +     S    A  G++NL +  +   + +   + S  E GR    KG  
Sbjct: 64  AAKTVLDRIDMSRIAYSSDAYAESGYLNLRIDKARFFRDILK-LASSEELGRGE-RKGVV 121

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS-V 181
             +E  SANP  P+HVG  R AV+GD+ + ++ F G++V R Y +ND   Q+  LA    
Sbjct: 122 GMVEHTSANPVHPLHVGSGRNAVIGDSFSRILNFLGWDVRRHYLVNDCNLQVAILAAGRS 181

Query: 182 FWRYQQALYNNDSDLP---------------EGYYPGVYLKHVGKELADKYSSELL---- 222
             R        D                   +  +          E+ ++          
Sbjct: 182 KVRDLIPKGKVDHWFGLIYAISNAFLEIWRIKNGFNSESKIEEWSEVVERIGRMEPELLR 241

Query: 223 --NFPEEKWLPIVKDYS-------------VQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                EE+ + ++++Y               +++++   + L+ + I +D F  E +   
Sbjct: 242 IGELSEEEVMSLLREYQRKEGGSVQMFREITESVLRGFVETLERMGITYDSFDRESEL-- 299

Query: 268 GDPSPIRDIIDNLARQGY-----------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                +   I+ L   GY           ++E        +   +   D    L R   +
Sbjct: 300 IWDGWVDRAIEKLESSGYLKREGKAAYVDLWEAAKGDENVRKVFELSEDDISKLEREGKL 359

Query: 317 GDDVDR--PLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAA 373
           G+ + R   L +SDG++ Y   D+AY   K++  G      V+ S+ +   K + A  A 
Sbjct: 360 GEVIPRKFYLTRSDGTWLYTGTDVAYSLYKFDGLGVSFCYNVIASEQNMEQKGVRACLAL 419

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
           +     ++  L  E+V L        MS R G +ITL  V+DE                 
Sbjct: 420 MGHDPGKLIHLSYEMVNLV----GAAMSGRRGLYITLDEVLDEAKRRVEAILKERGIYDE 475

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                V   ++++ ++    ++++ F + +V    +EN   ++QYAY R  +I ++A+ +
Sbjct: 476 EICEKVAIGALKYGLISVSPNKVVQFRWERVLNL-EENSGPFIQYAYTRALNIIKKAQGV 534

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D D +    +          +E+ ++  ++E+P  + +A     P  +A Y  +LAS 
Sbjct: 535 PEDFDPNELKSD----------AEITIVQMISEFPERVWSAFNLMRPDIIASYANELASQ 584

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F+  +           + A   +    RL LV+AV   +   +++IG+     M
Sbjct: 585 FNKFYEDH------PVLSAARPEERAARLNLVNAVKGTLGLAMDLIGIPRLERM 632


>gi|169835629|ref|ZP_02868817.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 596

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 129/632 (20%), Positives = 236/632 (37%), Gaps = 90/632 (14%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +   +S++ + + +   ++     I D + +  P          + A  LS+ L   P  
Sbjct: 3   YTKITSKITSDINDAIMRLYPNTNIPD-VTVTVPTQLDKADFVCDVAFRLSKILHTAPYV 61

Query: 64  IAELIVARIKIDPDVDS---VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           I E I   +      D    +  A  GFIN++L+   L KIL  I  +   YGRN I  G
Sbjct: 62  IGESIAKEVNSTQLQDGDYTLEAARPGFINVHLTDVSLSKILIHINDTNQNYGRNDILAG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL- 179
            +  IE  S NP   MH+GH R  ++G  +A++ A+ G  V R+   N+ G  I      
Sbjct: 122 QRWVIEHTSPNPNKAMHIGHLRNNLIGMAVANIAAYCGASVVRDCIDNNRGIAIARAMWG 181

Query: 180 ----------------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
                                 S +   ++     D  +   Y  G        E+  + 
Sbjct: 182 FLKCKKRDSAKDATLVDWANNPSAWITPEEEGTKPDHFIGTCYMYGAEAAKKSPEIDQEI 241

Query: 218 SSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
               L++   +     + K  ++      I   L  +    D+   E + ++     I D
Sbjct: 242 RQIALDWENGDANTWKLWK-LAIGYAHDGINQTLARIGSHWDLVWHEHEHYKDGRGMILD 300

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            I     +      IL   KS                        D  +LKSDG+  Y  
Sbjct: 301 NISKGIFKRLENGAILSNLKSYNLP--------------------DTIVLKSDGTSLYIT 340

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYR 393
            D+A  K K  R   D + +V+G + S  +K++ A+   +   K +    L   L+ +  
Sbjct: 341 QDIALTKLKKNRFKADKLFWVIGPEQSLAMKQVFAICEQLGIGKLSDFTHLPYGLISIVD 400

Query: 394 D--GMPIKMSKRAGDFITLRHVVDEV-------------------GSDSVRFMMLWRKNS 432
              G   KMS R G+ + + +++DEV                     D+V+F +L    +
Sbjct: 401 KQTGAKKKMSSRDGNTLYIDNLLDEVRDSLLNSGRDYDEKTADLIAIDAVKFAVLKPSRN 460

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
                D  +     K +   Y+ Y  +R  S+  +        D  L       +E    
Sbjct: 461 SDSVLDIQESINL-KGDSGIYILYTLSRINSLLSKYTG-----DLTLPQ----SEELALS 510

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
           + E ++++ +A +P+ I +A  +  P  L  Y+ D+A VF+  ++  +         + +
Sbjct: 511 SEERKIVMLMAYFPKRITDALESYAPNILIEYILDIAHVFNSIYAKEQF-------ISED 563

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              T  +L L  ++A +I + L ++G++  + 
Sbjct: 564 VANTRKKLYLSKSIAIVITNALKLLGIKPVDR 595


>gi|118381734|ref|XP_001024027.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89305794|gb|EAS03782.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 616

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/567 (16%), Positives = 204/567 (35%), Gaps = 95/567 (16%)

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
             D  ++ + +  +GF+ + L    +   +++I+ +G+ Y      K  K+ ++F S N 
Sbjct: 89  DKDCAIEKLGVTDQGFLTIKLKQQVIEDEINNILKNGLNYP---TEKKQKIAVDFSSPNI 145

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN- 191
              MHVGH R  ++G+++  +  F  +EV R  ++ D G Q   L   +  +Y   L   
Sbjct: 146 AKEMHVGHLRSTIIGESICRIFEFQNHEVLRINHLGDWGTQFGMLITYMKRKYPNFLNEP 205

Query: 192 -NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            + SDL   Y     L     E        +++   +   P  +  + + + +I R +  
Sbjct: 206 IDLSDLTMFYKESKKLFDEDPEFKKTAQLTVVDL--QSGDPECRK-AWEILCEISRREFT 262

Query: 251 ALNIQHDIF---ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  + DI      E  ++      I  +I +L   G +                + D  
Sbjct: 263 EIYKRLDITLEDFGESFYN----DKIPAVIQDLKDAGML---------------VESDGA 303

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKR 366
           Q +F      +     ++K DG Y Y + D+A  K + +    + ++Y+       +   
Sbjct: 304 QCVF-IEKYKNQPPLFIVKKDGGYGYDSTDMACIKYRLKTLNCNRLVYITDVGQQPHFDY 362

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416
           + A A  +                + +     +   R+ + + L+ ++DE          
Sbjct: 363 IIAAAEKIGWHVPPTTRAEHMGFGIVQGEDGKRFRTRSSETVKLKDLLDEARERALEKIK 422

Query: 417 ---------------------------------------VGSDSVRFMMLWRKNSELLDF 437
                                                  +G  ++++  L +      +F
Sbjct: 423 ERISGGAKEEGAEEDEEEKENKGNYTKLSEEEYLDAAEKMGMAAIKYYDLRQNRISNYNF 482

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            + K+ + +K N   Y+ Y+YAR  SI R++     +L   +  +            E  
Sbjct: 483 SYDKMLD-TKGNTAVYLLYSYARLCSIIRKSGVQSEELCKIIQTQGF----KISHPQERI 537

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           +   L ++P V++  T      +L  Y+YDLA          +     R    NN +  +
Sbjct: 538 IASLLIKFPDVLDQVTEDLAINRLTDYMYDLA---------CKVAEGYRKYHINNSEDKL 588

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNE 584
            R+ L+ A   ++     ++G++   +
Sbjct: 589 TRILLIEATRQVLEKCFYLVGIKPLEK 615


>gi|300175973|emb|CBK22190.2| unnamed protein product [Blastocystis hominis]
          Length = 449

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/485 (20%), Positives = 179/485 (36%), Gaps = 83/485 (17%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MHVGH R  ++GD L+ ++ +  ++V R  +I D G Q   L    + +   +   N   
Sbjct: 1   MHVGHLRSTLLGDCLSRVLEYCKHDVIRINHIGDWGTQFGMLL--CYLKEINSSNGNSLS 58

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +              ++L   Y +  + F E+   P  + +S Q ++ + + +   L++ 
Sbjct: 59  I--------------EDLTALYRAAKVRFDED---PTFRLHSHQEVVNLQKGEPWELSVW 101

Query: 256 HDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLL 310
             +       ++     +   ID  L  QG  +     P   K  +      D +  +++
Sbjct: 102 KQLCALSCQMYQTIYQRLG--IDPRLKTQGESFYNPFLPELVKELESKNLLTDQEGSKVM 159

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEA 369
           F   +   DV   + K DG + Y + DL   K +      D +IYV+ S  S + ++L  
Sbjct: 160 F---VPNFDVPLIIQKKDGGFGYDSTDLMALKYRTLVTKADWIIYVVDSGQSLHFQQLFE 216

Query: 370 VAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
                   +K +++ +   LV+        K   R+G  + L  ++DE            
Sbjct: 217 AGRKAGWAQKTRLDHVAFGLVQ---GKDKKKFKTRSGKNVRLTDLLDEACERATAILRQR 273

Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                               +G   V++  L +       F F ++    + +   Y+QY
Sbjct: 274 VESGLSNLSEEEAIVQTATQLGIGGVKYFDLRQNRLSDYVFSFDRMLS-PEGDTNVYLQY 332

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            +ARC SI R+A       + DL         S    SE  L   +  +   +E      
Sbjct: 333 THARCMSILRKA-------NMDLNGFRECGNISLSHRSEWSLACSILRFNDAVEKVAKDL 385

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            P  L  YLYDL    +  +   R       V          RL L+ A   ++  GLN+
Sbjct: 386 MPNVLCKYLYDLCISLNAFYRDCR-------VIGTPE--QNSRLLLIMAAEKVMRQGLNL 436

Query: 577 IGVES 581
           +G++ 
Sbjct: 437 LGIDV 441


>gi|118575544|ref|YP_875287.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194065|gb|ABK76983.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 607

 Score =  277 bits (710), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 121/633 (19%), Positives = 220/633 (34%), Gaps = 126/633 (19%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
            P     G LS N   +L++  G  P  IA+ +  + K    +        G++N  L  
Sbjct: 18  TPSKPGFGDLSCNVPFLLAKSRGRAPFEIAQELAVQYKTGGVIAGAEAHPGGYLNFSLD- 76

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
                I +  +V     G      G  V +E  S NP   +H+GH R  V+GD++A +++
Sbjct: 77  ---WGIAAKEIVIEAAGGGPAPAGGGPVTVEHTSVNPNKALHIGHVRNIVIGDSVARILS 133

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             GY+V+   YI+D+G Q+  + L               + P G     Y        A 
Sbjct: 134 REGYKVSVLNYIDDSGLQVADIILGFTEL------GIPEEPPGGKKFDQYCGDDVYAKAA 187

Query: 216 KYSSELLNFPEEKWL------------PIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
               E     E++ +              + D   + ++    +    L +Q+D    E 
Sbjct: 188 GACEEDPGLKEKRAVILRGLEDGTSETAHLADRITRRVLDGQLETCWGLGVQYDCLNFES 247

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
              R       ++ + L + G +             +K   +    +FRS   G D D+ 
Sbjct: 248 QIVR--SGLWDEVFERLKKMGLL-----------ELEKDGKNAGCWVFRS---GTD-DKV 290

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFD--------------------------------- 350
           +++SDG+ TY A D+ Y   K     D                                 
Sbjct: 291 VVRSDGTATYIAKDIPYAAWKLGLLDDPFRYVKHHREQPGGKELWETTLSGGEMRAGPAG 350

Query: 351 -NMIYVMGSDHS----------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
             ++ V+ +  S          G  K  E     +  +   ++      +     G   +
Sbjct: 351 GRVVTVIDTRQSRLQQIIASLMGRFKSDEGAYVHLGYESVSLSPGTAAALGADTGGKSAQ 410

Query: 400 MSKRAGDFITLRHVVDEVGSDS---------------------------VRFMMLWRKNS 432
           MS R G ++    V+  +   +                           +R+ M  +  +
Sbjct: 411 MSGRRGLYVNADTVLGVLAEKARAETSRRNPEMDKVELGRISADIASATIRYEMARQDLN 470

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             + FD  K     + +   Y+QY++AR   +  +A    PD + +             D
Sbjct: 471 RAITFDMEKSLSL-EGDTASYIQYSHARAARVMEKAG-AEPDYNAEYA--------LLED 520

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E  L+  +  +   + +A  +  P  +A Y + LA  F+G + H      +R + A N
Sbjct: 521 PRERALLREIGMFGIHLGDAAGSLSPKIIARYCHGLAVAFNGFYEH------VRVIDAGN 574

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L+  RL LV A    ++  L +IG+ +P+ M
Sbjct: 575 PALSNARLCLVRAFMHAVSGALYLIGISAPDRM 607


>gi|156103177|ref|XP_001617281.1| arginyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148806155|gb|EDL47554.1| arginyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 591

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/639 (17%), Positives = 228/639 (35%), Gaps = 112/639 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--- 59
           L        ++ +++    I       + +V+    +   GH   N A+ + +  G    
Sbjct: 7   LIKKIKQVFQHSIQKCFPSIS------EEVVVTY-ANAKFGHFQCNNALNIFKKYGKELN 59

Query: 60  --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
             +   ++++I+  I  +   + +  + +GFI + LS  Y+ K L  +  +        I
Sbjct: 60  VENAQKLSQMIIENISEN-FFEEIKSSPQGFITVKLSKEYIEKSLLKLYKNNQIDISVDI 118

Query: 118 GK--------GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +          +V ++F S N    MHVGH R  ++GD++  +  F   +  R  +I D
Sbjct: 119 DEVKGGNDGDYKRVLVDFSSPNIAKEMHVGHLRSTILGDSICRIFEFLKVQTIRVNHIGD 178

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPE-----GYYPGV---YLKHVGKELADKYSSEL 221
            G Q   +   +   +     N    +PE       Y      Y      E + K  +  
Sbjct: 179 WGTQFGMIINHIVSTHPNFKEN----MPELTNLTSLYQEAKKLYDADKEFEKSSKNYAIK 234

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L   +E  L + K    ++  K      K L+I+ + ++ E  +       ++ + D   
Sbjct: 235 LQNNDEDCLFVWKKL-CESSKKEFDKIYKILDIKLE-YVGESHYISMISPALQMLKDE-- 290

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                             Q        + ++S     +V   L KS+G Y Y + D+A  
Sbjct: 291 ------------------QLLSNVGDAICYQSENF--NVPLFLQKSNGGYGYDSTDVAAI 330

Query: 342 KCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             + +    D +IYV  +    + + +  +A           ++      L  +    K 
Sbjct: 331 HYRLKVLNSDCLIYVTDNGQLTHFETIFELAKKAKWASENTKLVHVGFG-LVLNADNKKF 389

Query: 401 SKRAGDF-----------------------------------ITLRHVVDEVGSDSVRFM 425
             R+G                                     I +  + +E+   ++++ 
Sbjct: 390 KTRSGTNIKLINLINEGTERAKKDLLERIQLKSEEEKTYFKGIDIDQLSEELCVSAIKYF 449

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +  +    F +  +    K N   Y+ YAY+R  SIFR+       +D D   ++ +
Sbjct: 450 DLKQHRNTDYKFSYDNMLN-VKGNTGLYIIYAYSRMCSIFRKC-----SVDMDELSKDEL 503

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              +     E+ L +H+ ++P V          +KLA Y YDL + F   + +       
Sbjct: 504 ---NLVSPYEVNLGLHILKFPDVFYFVLKNMLIHKLAEYTYDLTTTFTAFYENC------ 554

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + + + N K    RL L     S++   L ++G+++  +
Sbjct: 555 KVLNSENEK---TRLILCAIAKSLLQICLGLLGMKAIEK 590


>gi|307595328|ref|YP_003901645.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550529|gb|ADN50594.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 643

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 145/670 (21%), Positives = 258/670 (38%), Gaps = 115/670 (17%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
             +      ++  LK +  +I  +       VI  P    +G+L+     I+     +D 
Sbjct: 3   NPYNQVIEDVQRLLKLLSTEIGTDVTKYVNEVIRAP--PQYGYLAIPMHSIVREHGNID- 59

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKG 120
             I + I+ ++K+   ++ V +   G++N+ ++   Y   +L SI   G +YG +     
Sbjct: 60  EIINQKIIPQLKL---INKVVLVN-GYLNIDININDYANIVLLSISNLGDKYGLSDKCPT 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               IE  SANP  PMH+GH R AV+GD+LA L+ F G  V   +Y+ND G Q+  + + 
Sbjct: 116 GSYIIEHTSANPAKPMHIGHGRNAVLGDSLARLLRFCGASVKVHFYVNDCGDQMPYVGIG 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPG-VYLKHVGKELADKYSSELLNFPEEKWLPIV------ 233
            +      L   +         G +Y          + S ++     E            
Sbjct: 176 YYVAKDLVLSRINGGWKPDEVMGIIYSVTYAVSEIKRLSKQIEQLKNEGKYDDANKLIGE 235

Query: 234 KDYSVQAMMKIIRDD-------LKALNIQHD----IFISEDDFHRGDP---SPIRDIID- 278
           +D  V  +   I  D       LK L    D    +      +  GD      IR+ +D 
Sbjct: 236 RDEWVSVINNFIEKDKELTEALLKGLGKFEDLPLMVKQWSRAYEEGDEFVRKVIREAVDV 295

Query: 279 -------NLARQGYVYEG----------------ILPPPKSKTTQKCDMDRKQLLFRSTM 315
                   L R G V++                 ++     +  Q  + D   L+FR+  
Sbjct: 296 VLTGFRITLDRLGVVFDSWDFESEVAVDNGGVSRVINELLRRAPQYMERDNGALVFRADK 355

Query: 316 VGDDVDR-------------PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
              D++               LL+SDG+  Y   D+AY    ++   FD +I V+GS+ +
Sbjct: 356 YAQDLNLWDELKLPRYIPKATLLRSDGTSLYLTRDIAYALWFWDNFKFDKLIRVIGSEQA 415

Query: 362 GYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
               +L     A+   +   ++     E+V L      +KMS R G +++L  +++E   
Sbjct: 416 HPQAQLRLALHAMGYHELARKLIHYSYEMVNLA----GMKMSGRKGIYVSLDELLNEAKD 471

Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                                V   ++R+  L    ++ L F + KV    ++N   +VQ
Sbjct: 472 RVMEIVKGRFPPDEADKVAEAVAVGAIRYSFLSVSPNKPLTFSWDKVLNL-RQNSGPFVQ 530

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           Y Y R   I  +A ++             IP     +  EL L+  L EYP VI  A   
Sbjct: 531 YTYVRTNGILEKAGEVP--------KLTQIPNNIASEEKELTLL--LGEYPEVIAKAAQE 580

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
                +  Y+  L+ VF+ ++       +   + A    +   R+ LV+AV +++ + ++
Sbjct: 581 LRLENIIEYVNKLSLVFNSYYE------KYPVLNAE-PGIREFRINLVNAVRTVLGNAMD 633

Query: 576 IIGVESPNEM 585
           I+G+     M
Sbjct: 634 ILGIPRLRRM 643


>gi|90076998|dbj|BAE88179.1| unnamed protein product [Macaca fascicularis]
          Length = 380

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 178/405 (43%), Gaps = 39/405 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-----RPLGLD 60
           + +SRL+        K          +++   +    G    N+AM +S     +   ++
Sbjct: 3   NINSRLQEVFGHA-IKAAYPDLENPPLLVTPSQQPKFGDYQCNSAMGISQMLKTKEQKVN 61

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  ++ V IAG GFIN++L   ++ + L+S++V+G++     +G+ 
Sbjct: 62  PREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLP--AVGEN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 120 KKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 179

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +   +E   K + + +   + K   I K  + 
Sbjct: 180 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITK--AW 236

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +  + R +   +    D+ + E    F++     + DI+     +G+V          
Sbjct: 237 KLICDVSRQEFNKIYDALDVSLIERGESFYQ---DRMNDIVQEFEDRGFVQVD------- 286

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                   D ++++F   + G  +   ++KSDG YTY  +DLA  K +  E   D +IYV
Sbjct: 287 --------DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 335

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLC--ELVRLYRDGMPI 398
           + S  S + + + A A  +     ++  +      V L  D    
Sbjct: 336 VDSGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKF 380


>gi|302508940|ref|XP_003016430.1| hypothetical protein ARB_04719 [Arthroderma benhamiae CBS 112371]
 gi|291180000|gb|EFE35785.1| hypothetical protein ARB_04719 [Arthroderma benhamiae CBS 112371]
          Length = 748

 Score =  276 bits (707), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 106/646 (16%), Positives = 207/646 (32%), Gaps = 158/646 (24%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116
           G  P  IA  I A+      ++   + G      Y        ++ SI+ +   YG N  
Sbjct: 142 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 201

Query: 117 ---------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
                         K+ +EF S N   P H GH R  ++G  +A+L    G+EV +  Y+
Sbjct: 202 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 261

Query: 168 NDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKEL 213
            D G Q   LA     +  ++ L  +    P  +   VY             +K + +++
Sbjct: 262 GDWGKQYGLLASGYEKYGSEEELLKD----PINHLFEVYVKINQDVAAQEGPIKELKEQI 317

Query: 214 ADKYSS---------------------------ELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             K                              + +   +EK L + + +   ++ K  +
Sbjct: 318 KAKKEKNEDVTELEKQLEPLVDASYDEQARRYFKSMEDGDEKALELWRRFRDLSIDKY-K 376

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                LNI  D++  E              ++N                       +   
Sbjct: 377 QTYARLNIDFDVYSGESQVKDESIKKSYKAMEN-------------------AGVSESSE 417

Query: 307 KQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
             ++      G        +++ DG+  Y   D+A    +  E  FD MIYV+ +    +
Sbjct: 418 GAVIIDFAKHGAKKLGKAIVIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELH 477

Query: 364 VKRLEAVAAAVSEKK--AQINVLLCELVRLYR-----------------DGMPIKMSKRA 404
           + +L      V +K    +   +   +VR                    + M   M K  
Sbjct: 478 LAQLFKTTELVGKKDLANRCEHISFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMQKNQ 537

Query: 405 GDFITLRH---VVDEVGSDSVRFMMLWRKNSEL--------------------------- 434
             +  +       D +G  SV    +  K   L                           
Sbjct: 538 AKYEQIEDPVATADVLGITSVMVQDMSGKRLFLFFSFLSFFLSFFLSFFLSFFFFFALFI 597

Query: 435 ----------------LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
                            +F+   +    + +   Y+QYA+AR  S+ R+A+    +L   
Sbjct: 598 AIWREFNPRNRRKINGYEFNLENMTSF-EGDTGPYLQYAHARVCSVTRKAEINPEELGSA 656

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        ++  + L+  LA++P V+ NA+   EP  +  YL+ +  +    +  
Sbjct: 657 DLSL-------LTESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRMTHMLSSGYDV 709

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            +       V  +  ++ M R+ L  +   ++++G+ ++G+     
Sbjct: 710 LK-------VVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKR 748


>gi|124805963|ref|XP_001350588.1| arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23496712|gb|AAN36268.1|AE014846_67 arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 590

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 107/639 (16%), Positives = 217/639 (33%), Gaps = 113/639 (17%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--- 59
           +     +  +N +++    I  +  +          +   GH   N A+ + +  G    
Sbjct: 7   ITKKIKTIFQNSIQKCFPSISEDAIVTYA-------NLKFGHYQCNNAINIYKKYGKELN 59

Query: 60  --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS-------IVVSGI 110
             +   I+E I++ I  +   + +  + +GFI + LS  Y+   L          +   I
Sbjct: 60  YENAQKISEFIISNIN-ETIFEEIKSSPQGFITVKLSKDYIETSLKKLFNGEKIDISINI 118

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
              +        V ++F S N    MHVGH R  ++GD++  +  F      R  ++ D 
Sbjct: 119 NDIKESNENYGNVLVDFSSPNIAKEMHVGHLRSTIIGDSICRVFEFLKINTHRVNHVGDW 178

Query: 171 GAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGV---YLKHVGKELADKYSSELLNFPE 226
           G Q   +   +   Y        D       Y      Y      E + K ++  L   +
Sbjct: 179 GTQFGMIINYIKTHYPNFKEEMPDLSNLTSLYQESKKMYDADKEFEKSSKENAIKLQNND 238

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI---FISEDDFHRGDPSPIRDIIDNLARQ 283
           E        +    + +  + +   L    DI   ++ E  +     +    ++D L   
Sbjct: 239 EDC-----KFVWNKLCESSKKEFDKLYNILDIKLEYVGESFYVPMLST----VLDLLKES 289

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
             +                      + ++S      V   L KS+G Y Y + D+A    
Sbjct: 290 KLLTNI----------------GDAICYQSENFK--VPLFLQKSNGGYGYDSTDVAALYY 331

Query: 344 KY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKM 400
           +  +   + +IYV       + + +  +       +K A++  +    V    +    K 
Sbjct: 332 RLTQLNCNCVIYVTDIGQLTHFETIFDLIKKTNWGDKNAKLMHVGFGFV---LNEDNKKF 388

Query: 401 SKRAGDFITLRHVVDE--------------------------VGSD---------SVRFM 425
             R+G  + L +++ E                          V  D         ++++ 
Sbjct: 389 KTRSGTTVKLINLIKEGTERAKRDLLQRIETKSEEEKSYFENVDIDQLSESLCVSAIKYF 448

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L +  +    F +  +    K N   Y+ Y Y+R  SIFR++     D+  D      I
Sbjct: 449 DLKQHRNSDYKFSYDNMLN-VKGNTGIYIIYGYSRICSIFRKSTINVEDISKDELSLTSI 507

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    E+ L +H+ ++P +          +KLA Y+YDL + F   + +       
Sbjct: 508 --------YEINLGLHILKFPDIFYYILKNMLVHKLAEYMYDLTTTFTAFYENC------ 553

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + +   N K    RL L     S++   + ++G++   +
Sbjct: 554 KVLNNENEK---SRLLLCSITKSLLKLCMELLGMKPIEK 589


>gi|312066682|ref|XP_003136386.1| arginyl aa-tRNA synthetase 1 [Loa loa]
 gi|307768450|gb|EFO27684.1| arginyl aa-tRNA synthetase 1 [Loa loa]
          Length = 513

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 106/521 (20%), Positives = 205/521 (39%), Gaps = 93/521 (17%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           I+I   +    G    N++M +++                           +AG G+IN+
Sbjct: 46  ILITETQQAKFGDYQFNSSMSIAQM-------------------------EVAGPGYINI 80

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+ +++   +++I + GIE     + +  +V ++F S N    MHVGH R  ++GD+++
Sbjct: 81  FLNKNWIAASIANIALKGIEIP---VIEKRRVVVDFSSPNIAKQMHVGHLRSTIIGDSIS 137

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHV 209
            L+ + G++V R  +I D G Q   L   +   +   +      SDL   +Y     +  
Sbjct: 138 RLLTYVGFDVLRLNHIGDWGTQFGMLIAHLQDCFPNFINEVPPISDLQT-FYKESKKRFD 196

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHR 267
             E     + + +   +      VK  + Q +  + R D   +  +  I I E    F++
Sbjct: 197 EDEAFKARAYQCVTKLQSFDPDYVK--AWQMICDVSRKDFNQIYDRLGITIVERGESFYQ 254

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                + ++++ L + G                  ++D  + + R   VG  V   ++KS
Sbjct: 255 K---HMIELVEELDKLG----------------VLELDEGRKILR---VGGRVPLTVVKS 292

Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG++TY  +DLA  K + +    D +IYV+ +  S + + + A    +         +  
Sbjct: 293 DGAFTYDTSDLATLKYRLFVDKADWIIYVVDAGQSLHFELVYAAGQKLGWYSQTEKRVEF 352

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------V 417
             + L       K   R+GD + L  ++DE                             V
Sbjct: 353 VSLGLVLGEDKKKFKTRSGDTVRLTDLLDEGVKRAEIKLQEKERDKVMISEELTLARDAV 412

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               V++  L +  ++   F F ++ +  + N   Y+ YA+AR +SI R       D+  
Sbjct: 413 AYGCVKYADLSQTRTQDYVFSFDRMLD-DRGNTAVYLLYAFARIKSICRNTGVSDEDIHN 471

Query: 478 DL--FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            L   P  V+P E +   SE +L   + ++   I N     
Sbjct: 472 YLCSLPNGVLPLEHK---SEFRLAKTILKFTDSILNTLDNF 509


>gi|294669637|ref|ZP_06734704.1| hypothetical protein NEIELOOT_01538 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308550|gb|EFE49793.1| hypothetical protein NEIELOOT_01538 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 450

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 164/397 (41%), Gaps = 26/397 (6%)

Query: 32  IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
           IV++  ++  HG    N  M  ++    +P  +A+ +  ++  +  ++S  +AG GFINL
Sbjct: 43  IVLQPTKNAEHGDYQINGVMAAAKRHNRNPRELAQQVADKLSGNHVIESAEVAGPGFINL 102

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +L + LS  + SG   G     K   V I++ S N    MHVGH R +++GD+++
Sbjct: 103 RLRADFLAQNLSHALHSG-HLGIRKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 161

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F G  V R+ ++ D G Q   L   +  + +       +DL + Y           
Sbjct: 162 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 221

Query: 212 ELADKYSSELLNF--PEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267
             AD     ++     +E  L + K +   ++   + + D L  L ++ +    E  ++ 
Sbjct: 222 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTL-GLKLRPEDVAGESKYN- 279

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                ++ ++D+L ++G   E           +   +D  +        G+     + K 
Sbjct: 280 ---DDLQPVVDDLVQKGLAVE-------DDGAKVVFLDEFK-----NKEGEPAAFIVQKQ 324

Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LL 385
            G + Y + DLA  + +  R   D ++YV+    + + ++L   +              +
Sbjct: 325 GGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEFI 384

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
                + +DG P K   R GD + L  ++ E    + 
Sbjct: 385 GFGTMMGKDGKPFK--TRTGDTVKLVDLLTEAVERAT 419


>gi|321476501|gb|EFX87462.1| hypothetical protein DAPPUDRAFT_235532 [Daphnia pulex]
          Length = 499

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/530 (20%), Positives = 202/530 (38%), Gaps = 79/530 (14%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +     L  IL +     +      + K     +EF S N   P HVGH R  + G+ L
Sbjct: 14  FHYCRDLLFDILGTHKEEYVSKKLLSVPKDQI-IVEFSSPNIAKPFHVGHLRSTIHGNFL 72

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++L    G+ V R  Y+ D G Q   L   +   +    ++  S  P      +Y+K   
Sbjct: 73  SNLFTALGHNVKRLNYLGDWGTQFGLLQFGLDQGWFS--WDEISKNPIRSLLEIYVKANA 130

Query: 211 KELADK----YSSELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKALNIQHDIFISEDD 264
               D+     +  L    E     I K+++   Q  +  +R     L ++ D F  E  
Sbjct: 131 LAEKDESVSVAARSLFQRLESGDQEISKNWAEIRQHTVTELRQTYARLGVKFDEFNWESQ 190

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           +   + + +  I++          G L     + T+   ++ K+++             L
Sbjct: 191 YGIKESAKVLSILEK--------SGHLVTRAGEGTKVIRLNEKKMV------------TL 230

Query: 325 LKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +KSDGS  Y   D+A    ++ +  F  M+YV+ +  S +   L+++ + +       + 
Sbjct: 231 VKSDGSSLYLTRDVAAAIDRWGKFPFRRMLYVVDNAQSDHFVALKSILSLM-------DH 283

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
                +   + G    MS R G  + L  ++DE                           
Sbjct: 284 AWASNIEHVKFGRIKGMSTRKGTIVFLSDLLDEAHARMKAKQITSQNTRVNVEENPQITD 343

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +   +V    L ++      F++     Q K +    +QY ++R  S+ +      PD 
Sbjct: 344 ILAVSAVIINDLKQRRQRDYVFNWDDAL-QDKGDTGIRLQYTHSRLHSLEKMCGVRLPD- 401

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D D    ++I ++   D     L+  L  + +V++++    EP  L  YL+DL+   H  
Sbjct: 402 DLDSLDTSLIQEQELID-----LMRDLGRFHQVLQDSYTHLEPCTLVRYLFDLS---HSL 453

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +  P    V++   +L  +RL +  A   +++ GL I+GV+   EM
Sbjct: 454 GVALKTIP----VKSQETELAQVRLAIFSASKRVLSIGLKILGVQPLEEM 499


>gi|146304478|ref|YP_001191794.1| arginyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145702728|gb|ABP95870.1| arginyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 619

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 138/659 (20%), Positives = 261/659 (39%), Gaps = 120/659 (18%)

Query: 5   ADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD  +++K  +  ++  ++ V ++ + +  IE P     G L+          LG  P  
Sbjct: 3   ADVLAKIKQEISSQVGQELGVSQESVYK-AIEYPPREEMGDLAIPFP-----ALGKKPQN 56

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +   I ++      + S+ ++G  F+NL L  + L   + S +    +YG   + K  ++
Sbjct: 57  L--EIKSKF-----IRSLSLSGP-FLNLRLDETQLFMEVFSSMDQ--DYGIEKVEKPKRI 106

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-F 182
            IE  SANP  P+H+GH R +++GD L  L    G+EV   +Y+ND+G Q+  L   +  
Sbjct: 107 VIEHTSANPIHPLHIGHLRNSIIGDALVRLSRARGHEVISRFYVNDSGRQVAILIYGLSK 166

Query: 183 WRYQQALYNNDSDL-------------------------PEGYYPGVY------------ 205
             Y +       DL                          +  Y                
Sbjct: 167 LGYPEPPDGAKKDLWAGTVYAMTNIILEIRAITDELKTAQDAEYREKVTKRDELVGLASE 226

Query: 206 LKHVGKELADKYSSELLNFPEEKWL--PIVKDYS-------------VQAMMKIIRDDLK 250
           ++   +E  D+ +  + + P+ +     I++ Y              V  +++  R+ L 
Sbjct: 227 IRSRNQEYFDRLAESIRDDPDPEGKIADIIRRYEAGDPQMKEIVRKYVNHVLEGFRESLG 286

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDN-LARQGYV-YEGILPPPKSKTTQKCDMDRKQ 308
            LNI+ D F  E D        ++ ++ + L+ +  + Y+G       K       D  +
Sbjct: 287 RLNIEFDEFDYESDL--LWSGEVKSVLRSALSSRARIEYKGTEALDLDKYLD----DEVR 340

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367
              R     +     L +SDG+  Y   D+AY   K+     + +I V+    +    +L
Sbjct: 341 KELRIPAGLEIPPLVLTRSDGTTLYTVRDIAYTIRKFLTSKAEQVINVIAEQQTVPQIQL 400

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------ 415
            A    +   +   N++      +   GM   MS R G +I+L  V +            
Sbjct: 401 RAALYLLGYPEMAKNLIHYSYSMVTLPGMT--MSGRLGRYISLDEVYEKVKQAVEEKTKD 458

Query: 416 --------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                   E+ + ++R+ +L     + + F+  KV    ++N   Y+QY Y R  +I  +
Sbjct: 459 RGNQVNIAEIVNSAIRYALLSVSADKPITFNVGKVTNF-EQNSGPYLQYTYVRAYNILSK 517

Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
              +I  D+D+                 + +L++ +A++P   +N+  + EP  L  YL 
Sbjct: 518 FTGEINLDVDYGDLVG-----------EKRRLLLAIAKFPETFKNSADSLEPELLVSYLR 566

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  F+  +   R       +Q  + K  M RL LV  V  ++ +GL ++G+ S  +M
Sbjct: 567 YLADTFNAWYDKER------VLQEQDEKKRMTRLNLVKGVEVVMRNGLRVLGISSLTKM 619


>gi|85057596|ref|YP_456512.1| arginyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789701|gb|ABC65433.1| arginyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 601

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 119/605 (19%), Positives = 230/605 (38%), Gaps = 85/605 (14%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71
           KN ++    K+ +E+ +L     E+P +      S       ++ +  +P  I E I  +
Sbjct: 51  KNKIQNAIQKVLLEELVLQ----EQPENDKF-DFSLPL-FAYAKKIKTNPHIIFENIKKK 104

Query: 72  I-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           I  I+   D +F+   GF+N+ L  + L   +   +        N   +   + I++ S 
Sbjct: 105 IVAINEIQDLIFL--NGFLNIKLKRASLAHKILIKINKLQTNYGNSPNQNQTIVIDYSSP 162

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--FWRYQQA 188
           N      VGH R  V+G+ L ++    G++V    ++ D G Q   + ++   +   ++ 
Sbjct: 163 NIAKNFSVGHLRSTVIGNALKNIYQKLGFKVVGINHLGDWGTQFGKMIVAYQKWGNKEKT 222

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIR 246
           L +  ++L + Y           EL ++ +   L   +  +K+L + K +   ++ +  +
Sbjct: 223 LKDPINELQKLYVFFHQKAKTNPELNEQANFAFLQLEQQNQKYLDLWKWFREVSLQEFCK 282

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                L I  D ++ E  ++      I  + + L ++  + E                + 
Sbjct: 283 I-YDILGISFDFYLGESFYN----DKIAHLFEELEQKKLLKE----------------ED 321

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
           K LL     +   +   + K++GS  Y   DL  FK +Y      N++YV+G++   Y K
Sbjct: 322 KVLLIELDNLPPGL---VKKTNGSNLYLTRDLTTFKYRYNTFNCQNILYVVGNEQKLYFK 378

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           +L  +   +     +I  +   LV +  DG   K+S R   F TL  V+++         
Sbjct: 379 QLAQIIEKMGYCDTKIKHINFGLVLM--DGK--KISTRNHKFTTLIEVINQATILAKKII 434

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           +   ++ F  L       +DF+   +  Q K     Y+QY  AR
Sbjct: 435 EEKNPHLSDINQNARKIAVGAIIFNDLKNDRHLDIDFNLETIL-QFKGQTGPYLQYTAAR 493

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             S+ ++       LD  L  + +  +   F      L   L  +P +++ A     P  
Sbjct: 494 LNSLLKK-----EKLDISLIDKTIYQKGHYFI-----LAKLLDYFPLILQKAQKDNMPSI 543

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           LA Y   +    +  +S  +     +     N       L L+ AV   +   L I+GV 
Sbjct: 544 LARYTLKITQNVNFLYSQEKILTDDKTTTNTN-------LLLIQAVFITLKESLRILGVP 596

Query: 581 SPNEM 585
               M
Sbjct: 597 FLENM 601


>gi|154296931|ref|XP_001548894.1| hypothetical protein BC1G_12554 [Botryotinia fuckeliana B05.10]
 gi|150843081|gb|EDN18274.1| hypothetical protein BC1G_12554 [Botryotinia fuckeliana B05.10]
          Length = 634

 Score =  273 bits (699), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 121/624 (19%), Positives = 223/624 (35%), Gaps = 103/624 (16%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            +   + + + ++L EI     V+  I+    +        G L         R  G  P
Sbjct: 34  NINDIYRAHITSHLAEIT---GVDSAII-YPALAWTNTLDKGDLVLPV--PALRVKGKKP 87

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GI 110
             +AE   A+    P V      G  ++  +     L ++L   ++            G+
Sbjct: 88  NELAEEWAAKFPESPLVHKPTTNGV-YLQFFFKADKLNELLIPTIIQQKTSFGQNKYLGL 146

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
               +      K+ IEF S N   P H GH R  ++G  L++L A  G++VTR  Y+ D 
Sbjct: 147 VDPEDPSKGQKKIVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAAVGWDVTRVNYLGDW 206

Query: 171 GAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK---------------------- 207
           G Q   LAL    +  ++AL  +    P  +   +Y+K                      
Sbjct: 207 GKQYGLLALGFDKYGDEEALKAD----PINHLFQIYVKINTDVKAEADKMAALEAEGKTD 262

Query: 208 ---HVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISE 262
              H+  E  D+ +        E     +  ++   +  +K  R+    LNI  D +  E
Sbjct: 263 EALHIKNEGLDEQARRYFKAMTENDEKAIAQWARFRELSIKRYRETYARLNIHFDDYSGE 322

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                          + +   G   E +    +S+     D  +      +  VG  + +
Sbjct: 323 SQVKA----------EVMEETGKKMEEMKIAEESQGAMIVDFTKHV----AGKVGKGLGK 368

Query: 323 PLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-- 378
            ++K  DG+  Y   D++    + E+  FD MIYV+ +D   ++++L  +   +  K+  
Sbjct: 369 AIVKRRDGTALYLTRDISELLQRKEKYDFDQMIYVVATDQELHLQQLFKIIELLGYKELR 428

Query: 379 AQINV-----------------LLCELVRLYRDGMPIKMSKRAGDFITLRHVV---DEVG 418
            +                     L +++R   + M   M K    +  +   V   D +G
Sbjct: 429 DKCQHINFGLVHGMSTRRGTVKFLDDILRDVAEKMHEVMQKNEAKYEQIADPVATSDILG 488

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             SV    +  K      F+   +    + +   Y+QYA+AR  SI R+A     ++   
Sbjct: 489 ISSVMVQDMSGKRVNGYTFNMETMTSF-EGDTGPYLQYAHARLCSITRKAALTPEEI--- 544

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
                        +     LI  L++YP V++N     EP  +  YL+ +  V    + H
Sbjct: 545 ----ASADLSLLTEVHAQNLIRTLSQYPDVVQNTVKTLEPTTILTYLFKMTHVLSSSYDH 600

Query: 539 GRENPRLRFVQANNRKLTMMRLQL 562
            R       +  + R++   R+ L
Sbjct: 601 LR-------IMGSEREVMKARMAL 617


>gi|74227701|dbj|BAE35694.1| unnamed protein product [Mus musculus]
          Length = 447

 Score =  273 bits (699), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 177/391 (45%), Gaps = 37/391 (9%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMIL-----SRPLGLD 60
           + +SRL+        +          +++   +    G    N+AM +     ++   + 
Sbjct: 75  NINSRLQEVFG-CAIRAAYPDLENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKEQKVS 133

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  IAE I   +  +  +D V IAG GFIN++L   ++ + L+S++V+G++     +G  
Sbjct: 134 PREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPV--LGDK 191

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV ++F S N    MHVGH R  ++G++++ L  F+GY+V R  ++ D G Q   L   
Sbjct: 192 EKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLIAH 251

Query: 181 VFWRYQQALY--NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +  ++   L       DL + +Y     +    E   K + + +   + K   I+K  + 
Sbjct: 252 LQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AW 308

Query: 239 QAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +  + R++ K +    DI + E    F++     ++DI+     +G+V          
Sbjct: 309 NLICDVSREEFKKIYDALDITLIERGESFYQ---DRMKDIVKEFEDKGFVQVD------- 358

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355
                   D ++++F   + G  V   ++KSDG YTY  +DLA  K + +E   + +IYV
Sbjct: 359 --------DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYV 407

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           + +  + + + + A A  +     ++ ++  
Sbjct: 408 VDNGQAIHFQTIFAAAQMIGWYDPKVTLVTH 438


>gi|148224766|ref|NP_001085437.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Xenopus
           laevis]
 gi|82184665|sp|Q6GQJ7|SYRM_XENLA RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Arginine--tRNA ligase; Short=ArgRS;
           AltName: Full=Arginyl-tRNA synthetase-like; Flags:
           Precursor
 gi|49117831|gb|AAH72745.1| MGC79100 protein [Xenopus laevis]
          Length = 580

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 116/563 (20%), Positives = 203/563 (36%), Gaps = 92/563 (16%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-VSGIEYGRNLIG----K 119
           AE +  ++  D  +  +    +G +   ++   L + +   +   G  YG N        
Sbjct: 68  AEQLAGKLVCDSVISDIGTT-RGSVTFKINRDLLTRNVLQQISKDGSLYGLNTELFSELS 126

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K  +E+ S N     HVGH R  ++G+ +A+L    G EV R  Y+ D G Q   L  
Sbjct: 127 RRKTIVEYSSPNIAKKFHVGHLRSTIIGNFIANLKQAVGNEVVRINYLGDWGLQFGLLGA 186

Query: 180 --SVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIV-- 233
             S F   ++ L N    L E Y        K  G +L+ +     L   +   L +   
Sbjct: 187 GFSSFGSKEKLLANPLQHLFEVYVKVNTAAEKDNGIKLSAQEFLRRLEGGDPHALSLWMH 246

Query: 234 -KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +D S+Q   KI     K L    D +  E  +        ++++  L  +G +      
Sbjct: 247 FRDISIQEYAKI----YKRLGAHFDDYSGESFYKE----KSQEVLKQLESKGLL------ 292

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
               K T     +   L   ST         +++SDG+  Y   D+A    + ER  FD 
Sbjct: 293 LKTDKGTVIDLSEEGNLSSYST---------VMRSDGTSLYITRDMAAAVDRMERYNFDE 343

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           MIYV       + ++L  +   + + +A     +         G+   M  R G+ + L 
Sbjct: 344 MIYVTDKSQKNHFQQLFKILKIMGKDQADRCQHVPF-------GLVQGMKTRRGEVVFLE 396

Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            V+DE                           +G  ++       +      FD+ +   
Sbjct: 397 DVLDEARSRMLQNMAASETSKQLDDPSDTAEKIGIAALIVQDFKGQLVSDYHFDWDQAL- 455

Query: 445 QSKENPVFYVQYAYARCRSI--FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           QS  +   ++QY +AR  S+   R  +D     DF++         S  +   +  + HL
Sbjct: 456 QSTGDTGVFLQYTHARLHSLQALRCPRDTE---DFEIA--------SLREPCVIATLQHL 504

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             Y  VI       +P  L  YL  L  + +          R   V+ ++ +    RL  
Sbjct: 505 LRYDEVIYKCLEDLQPRYLVTYLLSLGHLAN-------VAHRTLQVKGSSSEAAHARLLF 557

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
              V  ++ +G+ ++G+   N M
Sbjct: 558 FKNVQMVLGNGMKLLGITPVNNM 580


>gi|320450932|ref|YP_004203028.1| arginyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151101|gb|ADW22479.1| arginyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 592

 Score =  273 bits (698), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 130/632 (20%), Positives = 239/632 (37%), Gaps = 98/632 (15%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++  L+E   +   E  +  R+ + +      G         L++ L   P  IAE + A
Sbjct: 2   VRRALEEAIHQALKEMGLDLRLKVAKAPKDKPGDYGVPL-FALAKELRKPPQAIAEELKA 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           R+ + P V+ V I   G++N  +           ++   +        +   V IE  S 
Sbjct: 61  RLALPPFVEEV-IPVGGYLNFRIRTK-------DLLKEALRPKEPFPKREGLVLIEHTSV 112

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NP   +HVGH R   +GD+LA ++ ++G  V    YI+D G Q    A ++F      L 
Sbjct: 113 NPNKELHVGHLRNIALGDSLARILDYAGRRVLVLNYIDDTGRQ---AAETLFALRHYGLT 169

Query: 191 NNDSDLPEGYYPGVYLK-HVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +  +  + +    Y++ H   E  +      E+L+  E   L       V  ++     
Sbjct: 170 WDGKEKYDHFAGNAYVRLHQDPEYPNLQGGIEEILHALERGEL----REDVNRILLAQMA 225

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +KALN  +D+ + E D  R     +   +  L +  +V+     P + K      MD  
Sbjct: 226 TMKALNAHYDLLVWESDIVR--AGLLEKALRILEQSPHVFR----PTEGKYAGALVMDAS 279

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----------------------- 344
             +       +D    L++S G+ TY+A D+A+   K                       
Sbjct: 280 PFI----PGLEDPYFVLVRSGGAATYYAKDIAFQFWKMGLLEGLYFQPYENPYYPALRTS 335

Query: 345 ------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                 Y       I V+    S    +    AA       ++      L          
Sbjct: 336 APQGEPYTPRARETINVIDVRQSH--PQALVRAALALAGHPELAEGAFHLAYETVLLEGK 393

Query: 399 KMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSE 433
           +MS R G  +++  V++E                         V   ++RF M+  +  +
Sbjct: 394 QMSGRKGLAVSVDEVLEEAERRALAVIEEKNPDHPAKEEAARMVALGAIRFAMVKTEPRK 453

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            +DF + +     + +   YVQYA+AR  SI R+A +     + DL              
Sbjct: 454 QIDFRYAEALSF-EGDTGPYVQYAHARAHSILRKAGEWG---EIDLAQAT---------P 500

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E +L + L ++   +  A   + P+ LA YL DL++ ++ +++   +      V     
Sbjct: 501 YERELALALLDFEEAVLEAAEEKTPHVLAQYLLDLSASWNAYYNAKEDGRPATPVLTAPP 560

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            L  +RL LV ++   + +GL+++G+ +P  M
Sbjct: 561 GLRELRLGLVRSLQETLKTGLSLLGIPAPEVM 592


>gi|261195450|ref|XP_002624129.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239588001|gb|EEQ70644.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239610510|gb|EEQ87497.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 568

 Score =  272 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 108/595 (18%), Positives = 202/595 (33%), Gaps = 140/595 (23%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IAEL+   + ID       I                        + +E G  ++    K+
Sbjct: 41  IAELVAQALGIDSLFVYPKI---------------------QWTNSLEKGDLVLAGKKKI 79

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA     
Sbjct: 80  IVEFSSPNIAKPFHAGHLRSTIIGGFLANLHTVMGWDVVKMNYLGDWGKQYGLLANGY-- 137

Query: 184 RYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSS--------------------- 219
                 Y N+ +L   P  +   VY+K + K++A++                        
Sbjct: 138 ----EKYGNEEELVKDPINHLFDVYVK-INKDVAEQEGPIKELKEQIKQKKEKNEDTAEL 192

Query: 220 --------------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                               + +   +E  L + + +   ++ K  ++    LNI  D +
Sbjct: 193 EKDLQAKVDVSYDEKARRYFKSMEDGDESALALWRRFRDLSIEKY-KETYARLNIDFDRY 251

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E       P  +    +++++ G   +                  K +          
Sbjct: 252 SGESQI---KPESLAKAYESMSKTGVSEDSEGAVIVDFAKHGAKKLGKAI---------- 298

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               +++ DG+  Y   D+A    +  E  FD M+YV+ +    ++ +L  V   V  K 
Sbjct: 299 ----VVRKDGTPLYLTRDIAAIVERDEEYHFDKMLYVVAAQQDLHLAQLFKVTELVGRKD 354

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM------------- 425
                 L +  +    GM   MS R G    L  ++ +VG      M             
Sbjct: 355 ------LADRCQHVNFGMVRGMSTRKGTVKFLNDILKDVGEKMHEVMKKNTSKYEQVENP 408

Query: 426 ---------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                           +  K     +F+   +    + +   Y+QYA+AR  S+ R+A+ 
Sbjct: 409 EQTADILGITSVMVQDMSGKRINGYEFNLDDMTSF-EGDTGPYLQYAHARLCSMTRKAE- 466

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                  D    +        ++  + LI  LA +P V+ N T   EP  +  YL+ +  
Sbjct: 467 ------IDPSELSSADLSLLTESHAIDLIRLLASWPDVVFNTTKTLEPTTILTYLFRMTH 520

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           V    +   +       V  +  +L   R+ +      ++++G+ ++G+     M
Sbjct: 521 VLSSGYDVLK-------VVGSEPELKKARMAMYDCARQVLHNGMRLLGLNPVERM 568


>gi|91079400|ref|XP_966449.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum]
 gi|270004375|gb|EFA00823.1| hypothetical protein TcasGA2_TC003711 [Tribolium castaneum]
          Length = 554

 Score =  272 bits (696), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/500 (21%), Positives = 199/500 (39%), Gaps = 80/500 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K   + +EF S N   P H+GH R  ++G+ + +L +F   +VT+  Y+ D G Q   + 
Sbjct: 102 KPRNIVVEFSSPNIAKPFHMGHLRSTIIGNFIGNLNSFLNNKVTKLNYLGDWGTQFGFIK 161

Query: 179 LSV--FWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIV 233
           + V      Q+A+ NN   L  E Y     L      +AD+   E   L     + L   
Sbjct: 162 VGVDELQHTQEAIKNNPLKLLYESYVHANKLAEKDPTVADRARQEFNKLEKGAPEGLEYW 221

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K+Y +Q     +    K L +  D +  E ++   D   I+++ID L+ +  V       
Sbjct: 222 KEY-MQYSQNELEATYKRLGVVFDEYNFESNYSAKD---IQNVIDILSSKHIV------Q 271

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
            +       D++++++              ++KSDGS  Y   D+A    +Y R  FD M
Sbjct: 272 KEGDGKLSVDVNKRKV-------------SIMKSDGSTLYLTRDIAAAIDRYNRYSFDKM 318

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +Y++ +  S +   L+A+   +S   A         ++  + G    MS R G  + LR 
Sbjct: 319 LYIVDNSQSDHFNNLKAILHKMSLPWAH-------KLQHVKFGRIRGMSTRKGTAVFLRD 371

Query: 413 VVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++DE                           +G   V    L ++  +  +F +  V  Q
Sbjct: 372 ILDECRELMIKKQVESPNTRVPIEDSAVSDILGVSCVIVNDLKQRRQKDYEFTWDSVL-Q 430

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + +    +QY + R  S+ R +            P+ VIP E   +     L+  +A +
Sbjct: 431 VQGDTGVKLQYTHCRLYSLERNSGATR--------PKKVIP-EVLKEPEATALVREIARF 481

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             ++  +    E   L  YL+ L +  +      +  P    V+  + ++   RL L   
Sbjct: 482 HEILNRSNEQLEACILVTYLFRLCNQINK---ALKVLP----VKNTDPEIASQRLLLFIT 534

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++  G++I+G+   +EM
Sbjct: 535 ARQVLGKGMSILGLHPLDEM 554


>gi|239612563|gb|EEQ89550.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 634

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/620 (17%), Positives = 207/620 (33%), Gaps = 135/620 (21%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I+R +  AHG +    A +  +   +D   +A  + +++     + +    G  FI ++ 
Sbjct: 61  IQRTQVLAHGDVMVVVARLRLKGANVD--QVALDLSSKLCGISLISNPVPKGV-FIPIFF 117

Query: 94  SPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           S + L           R++     ++G++   N      KV +EF S N     H GH R
Sbjct: 118 SATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAGHLR 177

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++G  +A+L    G++V +  Y+ D G Q   LA+       + L+  +   P  +  
Sbjct: 178 STIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLAVGWQKFGSEELFQKE---PLKHLL 234

Query: 203 GVYLK----------------HVGKELADKYSSEL----------LNFPEEKWLPIVKDY 236
            VY K                  G++ ++  +  L          +   +   L + + +
Sbjct: 235 DVYAKINTLFKPEQEASKNARDNGQDTSEIENKGLYAERNAFFKKMEDGDPDALSLWRRF 294

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++ + IR     LNI  D +  E       P  I  +   L  +G   E        
Sbjct: 295 RDISIERYIR-TYARLNIAFDEYSGESTVR---PETIESVEKMLKEKGIYEENEGNRG-- 348

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
                                           G+ TY   D+A    +  +  FD MIYV
Sbjct: 349 --------------------------------GTTTYLLRDIAAVLERVGKYKFDKMIYV 376

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + ++   Y +R+      +        ++          G    MS R G    L  ++D
Sbjct: 377 VSAEQDSYFQRVFKTIEIMGYPDIATKLVHVNF------GKVQGMSSRLGTVKLLSDILD 430

Query: 416 E----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           E                            VG  +V    +  K      FD  ++    +
Sbjct: 431 ECGNAMHEVMRANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMTSF-E 489

Query: 448 ENPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            +   Y+QY++AR  SI R+A    D     DF L            +   + ++  +A+
Sbjct: 490 GDTGPYLQYSHARLCSIMRKAQLTADQVAKADFTLLK----------EPHAVDIVRLVAQ 539

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           YP +  +A    EP  +  YL+ L       +   +             ++ + R  L  
Sbjct: 540 YPDITSHAFKTLEPITVLTYLFRLTHQVSSAYDVIKVLGM-----NEGPEVMLARSALYE 594

Query: 565 AVASIINSGLNIIGVESPNE 584
               ++ +G+ ++G      
Sbjct: 595 GARQVLENGMRLLGFTPVAR 614


>gi|330886169|gb|EGH20070.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 430

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/465 (18%), Positives = 166/465 (35%), Gaps = 66/465 (14%)

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           +++ F G  V R+ ++ D G Q   L    + + + A  +  SDL E +Y          
Sbjct: 1   NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFYRA-------- 49

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
             A +   E   F E     +VK  +  A    +    K +++ H      + + R +  
Sbjct: 50  --AKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQ----ETYERLNVK 103

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDG 329
                +   +        ++   K+          + +        DD   P++  K+ G
Sbjct: 104 LTPADVMGESAYNDDLANVVNDLKATGLLVESNGAQCVFLEEFRPADDTPLPVIVQKAGG 163

Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
            Y Y   DLA  + + +    D ++Y +    + + +++  VA         + +     
Sbjct: 164 GYLYATTDLAPIRYRSKVLKADRVLYFVDQRQALHFQQVFEVARRAGFVHDGMQLEHMGF 223

Query: 389 VRL-YRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420
             +   DG P K   R G  + L  ++DE                           VG  
Sbjct: 224 GTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAELRSIAKAVGIS 281

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+         FD  
Sbjct: 282 AVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLLYAYTRVAGVFRKLG-----TPFDAS 335

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              ++         E +L   LA++   + N      P+ L  YLYDLA +F   + +  
Sbjct: 336 KGQIVLAA----PQEQELAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENC- 390

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  + A N      RL+L       +  GL+++G+E+   M
Sbjct: 391 -----PILGAENPDQQQSRLRLAALTGRTLKQGLDLLGLETLERM 430


>gi|326562857|gb|EGE13145.1| arginyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326567639|gb|EGE17747.1| arginyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 412

 Score =  271 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/438 (19%), Positives = 163/438 (37%), Gaps = 32/438 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  +  +K  +       +VE       ++ +      G    N  M  ++ LG++
Sbjct: 1   MNIQAILNDEIKKAMIAAGAGSEVEA------LVRQSNKIQFGDYQANGIMGAAKKLGIN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  + ID   + + IAG GFIN++L   ++ K  +   +S          + 
Sbjct: 55  PREFAQTVLDHLSIDDIAEKLEIAGPGFINIFLKNEWISKHANQANIS--RTLGVNAAQN 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V +++ S N    MHVGH R  ++GD++   + F G  V R  ++ D G Q   L   
Sbjct: 113 DTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRTLEFLGNTVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSV 238
           +       + + D SDL   Y    +     +  A K  + ++     +++   +    V
Sbjct: 173 LEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDEYCLTMWRKLV 232

Query: 239 QAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              M   +     LN+    D  + E  ++   PS    I+  L  +G   E        
Sbjct: 233 DITMAQCQHTYDRLNVTLTRDDTMGESLYNPMLPS----IVQTLKDKGLAVE-------D 281

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  +D       +   GD +   + K DG Y Y   D+A    +Y     D +I  
Sbjct: 282 DGAVVVFLDE-----FTNKAGDPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRVILF 336

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             +  + + ++   +         +  +      + L +DG P K   R G  + L  ++
Sbjct: 337 TDARQTLHAQQAWLITRKAGFVPDEFVMEHFTFGMMLGKDGKPFK--TRTGGTVKLADLL 394

Query: 415 DEVGSDSVRFMMLWRKNS 432
           DE    +   +   +  S
Sbjct: 395 DEAIERATTLIEQKKSRS 412


>gi|327311388|ref|YP_004338285.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947867|gb|AEA12973.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 629

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 130/626 (20%), Positives = 241/626 (38%), Gaps = 111/626 (17%)

Query: 44  HLSTNAAMILSR--PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101
              +  A I +R     +DP  +A+++            +      +IN  + P+ L + 
Sbjct: 31  DFPSKFAFISARLHKFKVDPSKVADILSTYTFKYLTNVRLENL---YINADVDPARLAEE 87

Query: 102 LS-SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           L  ++   G  YG +      +  +E  SANP  P+HVGH R AV+GD L  L+ F G E
Sbjct: 88  LFKAVYAMGDRYGYSDRCVHGRYLVEHTSANPLHPLHVGHGRNAVLGDALVRLLRFCGSE 147

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--KYS 218
           V   +Y++D G+Q+   AL      ++        +      G Y+  V   +A+  +  
Sbjct: 148 VEVHFYVDDCGSQVMYAALGYEAARREVDELIGRGVKPDLAVG-YVYSVATAIAEINRLK 206

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIR--------------DDLKALNIQHDIFISEDD 264
                 P+EK   I+ +  +   + +I+              + L   ++  +       
Sbjct: 207 KLAEGQPDEKRREILAE--IDEWLGVIKRHLDVEPDLVNALTERLGQRDLSAEAAELNRL 264

Query: 265 FHRGDPS---PIRDII--------DNLARQG-----YVYEGIL-----------PPPKSK 297
           + RGD      +R ++        + L R G     + YE  L              + +
Sbjct: 265 YERGDEEVKRKVRAVVGLVLRGQQETLRRLGISVDSWDYESELAVWNNAAAQLVEDLRRR 324

Query: 298 TTQKCDMDRKQLLFRSTMVGDDV-------------DRPLLKSDGSYTYFAADLAYFKCK 344
                +     ++FR+    +D+                L +SDG+  Y   D+AY   +
Sbjct: 325 WPAYIEYKEGAVVFRADKFAEDLKLREELDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQ 384

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSK 402
             R  D +I V+ S+ +     +  +  A+  ++   ++     E+V +      +KMS 
Sbjct: 385 SRRPVDKVIRVISSEQTHEQAHVRIILYALGYREEAKKLVHYTYEMVNMP----GMKMSA 440

Query: 403 RAGDFITLRHVVDE-----------------------VGSDSVRFMMLWRKNSELLDFDF 439
           R G ++ L  ++DE                       VG+ ++RF  L     + +DF +
Sbjct: 441 RRGQYVALDEILDEAAERSADVVKEKDREVASVVGEKVGAGAIRFFYLSASPRKPIDFKW 500

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             V    + N   ++QY Y R  SI  +A            P +      +    E +L+
Sbjct: 501 DVVLNM-RSNSGPFLQYTYVRASSILEKAG---------SAPGSPPQIPPQIQPEEAELV 550

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA +P  + +A     P  ++ YL  L+ +F+ ++           V  +   +   R
Sbjct: 551 ERLAMWPWTVASAARDLRPDYISEYLNSLSLLFNSYYEKY-------PVIKSEEPVRSFR 603

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L LVHAV +++ +GLNI+G+     M
Sbjct: 604 LALVHAVRTVMRNGLNILGIPILQRM 629


>gi|19173381|ref|NP_597184.1| ARGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621147|sp|Q8SRD8|SYR_ENCCU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19170970|emb|CAD26360.1| ARGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 563

 Score =  271 bits (692), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/531 (20%), Positives = 199/531 (37%), Gaps = 84/531 (15%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN     + L+ +L  I  +   +G N +GKG ++ +E+ S N     H+GH R  V+G 
Sbjct: 83  IN---KRAILKDVLGYIQKNREIFGNNNVGKGKRMVVEYSSPNIAKIFHIGHLRTTVLGQ 139

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK 207
            + +L+  SGYE T   Y  D G Q   + L    +  ++ L  +        Y  +   
Sbjct: 140 FIVNLLRASGYETTSINYFGDWGKQFGFVLLGYSKYGSEEELEKDPLKHLFNVYVKISAD 199

Query: 208 HVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                  D  + E+    EE   +W   +     +  ++  +   K LN++ D++  E  
Sbjct: 200 AEKNPDVDSEAKEIFRMMEEDKDEWCMNLWRRFRELSIEKYKVLYKRLNVEFDVYSGESM 259

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           ++                +  V            ++  D+ +   +             +
Sbjct: 260 YNE-------------KGKSIVETSKQIKTDEDGSKVFDLGKAGKVL------------V 294

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +K+DG+  Y   D+A    + E    + +IYV+ S+ + + + L  V   +   K +   
Sbjct: 295 MKNDGTTLYITRDIAAAIERLEEYSPEKIIYVVSSEQNKHFEDLFGVLEMLGYDKDKFQH 354

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           +   LV          MS RAG    L  ++ E                           
Sbjct: 355 VSYGLV--------AGMSTRAGKVQLLEDIIQESTEVMKNVMMSDNNKGSFTAAEMDQTA 406

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             +   ++  M    +  +  +FD  K + ++      Y+QYA+ R RSI  +      +
Sbjct: 407 EVLAISTLLVMDFTARRVKGYEFDIEK-RARNTSGTGLYLQYAHCRLRSIETK------N 459

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            + D      I  E       L L+  L  +  V+E      EP ++  YL DLAS  +G
Sbjct: 460 SNVDYNDIETIDFELIHVPKVLNLVYKLLWFEHVVEKCLEDYEPSRIVTYLQDLASSING 519

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +  R       V   +++L   RL ++ +   ++++GL I+G    N+M
Sbjct: 520 AINILR-------VLGVDKELARARLLVLSSARIVLHNGLRILGATPLNKM 563


>gi|330834376|ref|YP_004409104.1| arginyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566515|gb|AEB94620.1| arginyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 619

 Score =  270 bits (691), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 126/659 (19%), Positives = 253/659 (38%), Gaps = 116/659 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A     + + + E    + V    + +I+ + P     G L+          L ++
Sbjct: 3   MDILAKIKLDISSCIGE---SLGVPGDYIYKIM-QYPPKEEMGDLAIPLP-----ALKVN 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P          +++       +     F+N+ L+   +   L S +    +YG   + + 
Sbjct: 54  PQ-------KELEVRSKFVKSYNVSGPFLNVKLNEREVFIELFSSM--NRDYGLEKVERP 104

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K+ IE  SANP  P+H+GH R A++GDTL  L    G++V   +Y+ND+G Q+  L   
Sbjct: 105 KKIIIEHTSANPIHPLHIGHLRNAIIGDTLVRLSKARGHDVISRFYVNDSGRQVALLIYG 164

Query: 181 V-FWRYQQALYNNDSDL-------------------------PEGYYPGV---------- 204
           +    Y +       D+                          E  Y             
Sbjct: 165 LSKLGYPEPAQGVKKDIWAGLIYAMTNIILEIRSLTDQLKLAQESEYREKITKRDELVGL 224

Query: 205 --YLKHVGKELADKYSSELLNFPEEKWL--PIVKDYS-------------VQAMMKIIRD 247
              ++   +E  D+ +  + N P+ +     I+K Y              V  +++  R+
Sbjct: 225 ASEIRSKNQEYFDRIAEAVKNDPDPEGKINEIIKRYEDGDPEIKAVVRKYVNYVLEGFRE 284

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDR 306
            L+ L I  D F  E D        ++ ++ + L+ +  +        +       ++ R
Sbjct: 285 SLEKLGITFDYFDYESDI--LWSGEVKSVLRSALSSKARIEYKGTEALELNKYVDEEIRR 342

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
           +    R     +     L +SDG+  Y   D+AY   K+     + +I V+    S    
Sbjct: 343 E---LRIPEGLEIPPLVLTRSDGTTLYTVRDIAYTIRKFISTNAEQVINVIAEQQSVPQI 399

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------- 415
           +L A    +   +   N++      +   G    MS R G +I+L  + D          
Sbjct: 400 QLRAALYLLGYPEMAKNLIHYSYSMVTLPGTT--MSGRLGRYISLDEIYDKVMLTVLEKT 457

Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                    E+ + ++R+ ++    +  + F+  KV    ++N   Y+QY Y R  +I  
Sbjct: 458 KDRGGVNVAEIVNSAIRYAIISVSANRPITFNVSKVTNF-EQNSGPYLQYTYVRAYNILA 516

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +      +++ ++   +V+ ++        ++++ L ++P V + +  + +P  L  YL 
Sbjct: 517 K---YPHEINLNVDYTDVVMEK-------RKILMALLKFPEVFKVSADSLQPETLVSYLR 566

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            LA  F+  +   R       +Q  + +  M RL LV  V ++I +GL ++G+ S  +M
Sbjct: 567 SLADSFNSWYDKER------VIQEPDERKRMTRLNLVKGVETVIRNGLQVLGISSLTKM 619


>gi|18314006|ref|NP_560673.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|23822198|sp|Q8ZTA8|SYR_PYRAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18161582|gb|AAL64855.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 630

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 141/675 (20%), Positives = 259/675 (38%), Gaps = 149/675 (22%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
                  L E+  ++ + +       +ER R   +G  S            +D   +AE 
Sbjct: 8   REEFVKVLGEVSRELGLPE----VPEVERTRR--YGFFSARFH-----KYKVDHSRLAE- 55

Query: 68  IVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVN 124
           +V  IK      + S+ + G  ++N  L+ S + +++   VV  G +YG           
Sbjct: 56  VVNLIKNKRFEFLSSLSVDGL-YLNADLNVSKVAELVFEAVVKMGRKYGFTEECVTGSYL 114

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E  SANP  P+H+GH R A++GD+LA L+ F G +V   +Y++D G Q+   A+     
Sbjct: 115 VEHTSANPVHPLHIGHGRNAILGDSLARLLKFCGNKVETHFYVDDCGVQVMYAAMGYNAV 174

Query: 185 YQQALYNNDSDLPEGYYPGVY------------LKHVGKELADKYSSELLNFPEEKWLPI 232
             +     +   P+     VY             K + K   D+   E+L   +E W+ +
Sbjct: 175 KDEVKKRIEKSKPDVVIGHVYSATNAVAEIGRLKKELEKAQDDERKREILREIDE-WVAV 233

Query: 233 VKDYS--------------------------------------------VQAMMKIIRDD 248
           +K                                               V  ++K  R+ 
Sbjct: 234 LKRLMDSEGDIISKIAEELGRRDLLNEAVELNRRYESGDPEAKGVVREVVDLVLKGQRET 293

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  L ++ D +  E +        +R               I+   + +  Q  ++    
Sbjct: 294 LARLGVEIDKWDYESELTVWSSEAMR---------------IVSELQKRWPQYIEIKGGA 338

Query: 309 LLFRSTMVGDDV-------------DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
           ++FR+     D                 L +SDG+  Y   D+AY   +  +GFD +I V
Sbjct: 339 VVFRADKFVQDYNLWDVLDLPRFIPPVTLTRSDGTTLYVTRDVAYALWQARQGFDKVIRV 398

Query: 356 MGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           + ++ +     +  +  A+    +  +I     E+V L      +KMS R G +I+L  +
Sbjct: 399 ISTEQTHEQAHVRIILYALGYVDEAKKIVHYAYEMVNLP----GMKMSARRGQYISLDEI 454

Query: 414 VDE-----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +DE                       VG  SVR+  L     + ++F +  V    ++N 
Sbjct: 455 LDEAAERSASLVKEKNPEVSGVIAERVGVGSVRYAFLTTSPRKPIEFKWDVVLNL-RQNS 513

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             ++QY Y R  SI  +A +I             +P        E +L++ +AE+P V++
Sbjct: 514 GTFLQYTYVRAYSILEKAGEIGN-----------VPVPENMLAEERELVLKIAEWPSVVK 562

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A  +  P  +A YL  LA VF+ ++      P L+        +   R+ +V+AV +++
Sbjct: 563 EAAKSLRPDYVAEYLDGLALVFNSYYEK---APVLK----AEESVRGFRIAIVNAVKTVL 615

Query: 571 NSGLNIIGVESPNEM 585
            +G  I+G+ +  +M
Sbjct: 616 EAGFYILGIPTLTKM 630


>gi|39938941|ref|NP_950707.1| arginyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722050|dbj|BAD04540.1| arginyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 557

 Score =  269 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 114/616 (18%), Positives = 232/616 (37%), Gaps = 90/616 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     S+++N ++++  +  + ++ L+        +      S       ++    +
Sbjct: 1   MNLQTT-KSKIQNVIQKVLLEELILQEQLE--------NDKF-DFSLPL-FAYAKKTKTN 49

Query: 61  PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  I E I   +  I+   + +F+   GF+N+ L  + L   +   +        N   +
Sbjct: 50  PHIIFENIKKNLVTINEIQELMFL--NGFLNIKLKRASLAYEILLKINELQANYGNFPNQ 107

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + I++ S N      VGH R  V+G+ L ++    G+EV    ++ D G Q   + +
Sbjct: 108 NQIIVIDYSSPNIAKNFSVGHLRSTVIGNALKNIYQKLGFEVVGINHLGDWGTQFGKMIV 167

Query: 180 SV--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKD 235
           +   +   ++ L +  ++L + Y           EL ++ +   L   +  +K+L + K 
Sbjct: 168 AYQKWGNKEKILKDPINELQKLYVFFHQQAKTNPELNEQANFAFLQLEQQNQKYLDLWKW 227

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   ++ +  +     L I  D F+ E  ++      I  + + L ++  + E       
Sbjct: 228 FREVSLQEFCKI-YDILGISFDFFLGESFYN----DKIAPLFEELEQKKLLKE------- 275

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
                  ++D                  + K++GS  Y   DL  FK ++      N++Y
Sbjct: 276 EDQVLLIELDN------------LPPGLVKKTNGSTLYLTRDLTTFKYRFNTFNCQNVLY 323

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G++   Y K+L  +   +     +I  +   LV +  DG   K+S R   F TL  V+
Sbjct: 324 VVGNEQKLYFKQLAQIIEKMGYCDTKIKHINFGLVLM--DGK--KISTRHHKFTTLIEVI 379

Query: 415 DE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           ++                         +   ++ F  L       +DF+   +  Q K  
Sbjct: 380 NQATILAQKIIEEKNPHLSNLNQTARKIAVGAIIFNDLKNDRHLDIDFNLETIL-QFKGQ 438

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              Y+QY  AR  S+  +       LD +L  + +  ++  F      L+  L ++P ++
Sbjct: 439 TGPYLQYTAARLNSLLNK-----EKLDTNLIDKTIYQKDHYFI-----LVKLLDQFPLIL 488

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           + A     P  LA Y+  +    +  +S  +     +     N       L L+ AV   
Sbjct: 489 QKAQKDNMPSILARYMLKITQNVNFLYSQEKILTDDKTTTNTN-------LLLIQAVFIT 541

Query: 570 INSGLNIIGVESPNEM 585
           +   L I+GV     M
Sbjct: 542 LKESLRILGVPFLENM 557


>gi|194246825|ref|YP_002004464.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807182|emb|CAP18623.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 565

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/607 (17%), Positives = 228/607 (37%), Gaps = 67/607 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDP 61
           +F++  S+L+  L  I     ++  ++D     E                + S+ L  + 
Sbjct: 2   IFSNIKSQLEKKLIYI---YNIDINLIDNSTNFEI-------DFFIPL-FLYSKLLKKEI 50

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           L + E     +    ++ +V     GF+N+ L+ + L K +   +V   +   +      
Sbjct: 51  LNVFEEFKETLLTYEEISTVEFLN-GFLNIKLNRNLLTKNILLNIVDSKDKYGSKEYNNQ 109

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            + +++ S N      +GH R  V+G+ L ++    G++     ++ D G Q   L L+ 
Sbjct: 110 TIVLDYSSPNIAKNFSIGHLRSTVIGNALKNIYQKLGFKTISINHLGDWGTQFGKLILAY 169

Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             W   + +  +  +  +  Y   + +       ++ +S+L    E+K   ++       
Sbjct: 170 KKWGNHKKVLEDPMNELQKLYVFFHEQAKINPKLNQEASDLFYQLEQKNEELI------G 223

Query: 241 MMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           + K+ ++  LK  +  +D+   + D++ G+                 Y   +P    +  
Sbjct: 224 LWKLFKEISLKEFHKIYDLLGIKFDYYIGES---------------FYNDQIPDLILELK 268

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358
           QK  +   Q  +  T+        + K +GS  Y   D+A    ++    F  ++YV+G+
Sbjct: 269 QKKLLKLDQNAYIVTLNDMLPPALIQKKNGSTVYLTRDIAALLYRFRHYNFSKILYVVGN 328

Query: 359 DHSGYVKRLEAVAAAVSEKKAQIN--------------------VLLCELVRLYRDGMPI 398
           +   + ++L+ V   +      +N                    + L +++   +     
Sbjct: 329 EQKLHFQQLKQVVFKMGYDIDLVNINFGLILFKGKKLSTRFQKTIKLIDVIEQIKKLAKK 388

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
            ++ +  + + +  + +++   S+ F  L       +DFD  ++  Q +     Y+QY  
Sbjct: 389 IITIKNPNLLNIEDISNKIAIGSIIFNDLKNNRHLDIDFDIERMI-QFEGQTGSYLQYTC 447

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R  SI    K         ++    I   S        LI  L  +  ++E   I   P
Sbjct: 448 VRINSIL--EKIKKEKKKQIVWHELEINNNSYLKEHYFILIKLLDRFSLILEQTKIENMP 505

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             LA YL  +A  F+  +S  +       +Q  N       L LV +V  I+  GL ++G
Sbjct: 506 SILARYLLKIAKKFNHFYSKEKIITSQIILQNTN-------LLLVQSVFIILKEGLRLLG 558

Query: 579 VESPNEM 585
           +   N+M
Sbjct: 559 IPLLNKM 565


>gi|326484474|gb|EGE08484.1| arginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 632

 Score =  268 bits (686), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 127/597 (21%), Positives = 213/597 (35%), Gaps = 94/597 (15%)

Query: 46  STNAAMIL----SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--- 98
           STN  ++L     +  G++P  +AE I ++   +P +     A   FI L  SP  L   
Sbjct: 67  STNVDLMLITARLKLKGVNPKQLAEDIASKFPSNPLLSQP-TANGIFIPLSFSPDTLPKL 125

Query: 99  --------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
                   R    S  + G+    +      KV IEF S N     H GH R  ++G  +
Sbjct: 126 ILPFIFDRRASYGSNQLQGLRDPHDQSSGKKKVIIEFSSPNIAKEFHAGHLRSTIIGAYI 185

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           ++L    G++V +  Y+ D G Q   LA+       + L+  +   P  +   VY K   
Sbjct: 186 SNLYESMGWDVIKVNYLGDWGKQFGLLAVGWQRFGSEELFAEE---PLKHLLEVYAKINS 242

Query: 211 KELADKYSSELLNFPEE---------------KWLPIVKDYSVQ--AMMKIIRD------ 247
               +K +SE      E                +   ++D      A+ K  RD      
Sbjct: 243 LFAPEKEASEQARDRGEDTSEIESKGLFAARNAFFQKMEDGDPDAIALWKRFRDVSIERY 302

Query: 248 --DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 LNI+ D++  E        S +      L  +G          +   T   D  
Sbjct: 303 ISTYARLNIKFDVYSGESTV---KSSTVEKAESLLKEKG-------VYTEDNGTWIIDFK 352

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV 364
           +      +  +G  V R  +   G+ TY   D+A    + E+  FD MIYV+ ++   Y 
Sbjct: 353 KHG----APHLGVAVARTRI---GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYF 405

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           +RL      +        +           G  + MS R G    L  ++DE G      
Sbjct: 406 QRLFKTIELMGYTDVAAKLEHINF------GKVMGMSSRLGTVKILSDILDECGRAM--- 456

Query: 425 MMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRSI-FRQAKDIFPDLDFD--- 478
             + RKN    +   +  +V +      V     A  R  +  F  AK    + D D   
Sbjct: 457 HDVMRKNPAKYEQIENPAEVSDTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTDFVL 516

Query: 479 ------LFPRNVIPQESE-----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                 L PR +  Q SE      +   + ++  +A+YP V  NA    EP  +  YL+ 
Sbjct: 517 SFGKWILTPRRLQLQTSENFSLLKEPHAINILRLMAQYPDVTCNALKTLEPTTILTYLFR 576

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LA      +        ++ + A + ++ +  L L      ++ +G+ ++G      
Sbjct: 577 LAHQVSSGYD------VIKVIGAESHEIMIALLALYEGARQVLENGMRLLGFSPVKR 627


>gi|242783546|ref|XP_002480208.1| arginyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218720355|gb|EED19774.1| arginyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 641

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 115/636 (18%), Positives = 224/636 (35%), Gaps = 117/636 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           +   +   L E        + +  ++      D   G L  N A+   +  G  P  +A 
Sbjct: 44  YREHIAEKLGE--AAGVDPQLVYGKLAWTSTLDK--GDL--NLAVPALQIKGKKPQDLAV 97

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRN 115
            +  +      V+     G   +  +  P+ L K + S ++            G+    +
Sbjct: 98  ELAEKFPESDLVEKPTTIGVH-LQFFFKPAPLTKTVISRILENKSTYGTNGNLGLRDPSD 156

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 K+ +EF S N   P H GH R  ++G  LA+L   +G+EV +  Y+ D G Q  
Sbjct: 157 PSKGKKKMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLFTITGWEVIKMNYLGDWGKQYG 216

Query: 176 TLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-------------------------- 207
            LA   F RY  ++AL  +    P  +   VY+K                          
Sbjct: 217 LLANG-FERYGSEEALTKD----PINHLFDVYVKINKDMAEQEVPIKELRETIKNKKEKN 271

Query: 208 -HVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNI 254
             V  E  +  K      +    ++   ++D   +A+          ++  +     LNI
Sbjct: 272 EDVSDEEVELQKLVDASDDEKARRYFKKMEDGDPEALALWKRFRNLSIEKYKQTYSRLNI 331

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM---DRKQLLF 311
             D++  E       P  ++   + + R G          KS+     D      K+L  
Sbjct: 332 DFDVYSGESQVS---PESLQHAYETMERTG-------VSEKSEGAVIVDFTKHKAKKLGX 381

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
            + +        LL +D +      D+A          D            ++     + 
Sbjct: 382 XAPLYTLPETSVLLSNDTTKLMGYKDIA----------DKC---------QHIN--FGMV 420

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---DEVGSDSVRFMMLW 428
             +S +K  +   L +++R   D M   M K    ++ +   +   D +G  +V    + 
Sbjct: 421 RGMSTRKGTVK-FLDDILRDVADKMHEVMKKNEDKYVQVDDPIATADTLGITAVMVQDMS 479

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            K     DF+   +    + +   Y+QYA+AR  SI R+A+    DL             
Sbjct: 480 GKRINGYDFNLDAMTSF-EGDTGPYLQYAHARLCSILRKAEINVEDLPKANLSL------ 532

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              ++  + L  +LA++P V+ N     EP  +  YL+ +  +    +   R       +
Sbjct: 533 -LTESHAIDLARYLAQWPDVVLNTVKTLEPTTVLTYLFRMTHMLSSSYDILR-------I 584

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
               ++L + R+ L  +   ++++G+ ++G+   + 
Sbjct: 585 VGREQELALARMALYESARQVLHNGMKLLGLNPVSR 620


>gi|195569059|ref|XP_002102529.1| GD19955 [Drosophila simulans]
 gi|194198456|gb|EDX12032.1| GD19955 [Drosophila simulans]
          Length = 572

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 113/535 (21%), Positives = 204/535 (38%), Gaps = 88/535 (16%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L P    + L       +            + +E+ S N   P HVGH R  ++G+ L
Sbjct: 86  FQLQPQVFVEQLLQTKEHALH---PSPFAAEHIVVEYSSPNIAKPFHVGHLRSTIIGNVL 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L    GY  TR  Y+ D G Q   LAL V     Q L  +D ++       +Y  +V 
Sbjct: 143 ANLHQHLGYRTTRLNYLGDWGTQFGLLALGV-----QMLNVSDKEMQLSPIETLYKSYVA 197

Query: 211 KELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIR----DDL----KALNIQHDIFI 260
              A +   E+     +    L    D ++    +  R    +DL      L +  D + 
Sbjct: 198 ANQAAEQRPEIAQQARDLFAALEGGTDRAMAKQWQQYRKYTVEDLSKVYNRLGVYFDSYE 257

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  + +     I+D++D L   G +       P+    +   +D +++           
Sbjct: 258 WESQYSQ---QQIQDVLDKLRSAGLL------QPEHDGREIVVVDGRRI----------- 297

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             P++KSDGS  Y A D+A    +  R  F  ++YV+ +  + +   L    AA+ ++  
Sbjct: 298 --PVIKSDGSTLYLARDIAALVERLSRFQFSRLLYVVDNGQADHFNALFKTTAALDDR-- 353

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
               L  E ++  + G    MS R G  I L+ V+DE                       
Sbjct: 354 ----LSLEQLQHVKFGRIHGMSTRQGKAIFLKDVLDEARDIMREKRNLSATTRENYSLDD 409

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +G  +V   +L ++     +F + +   Q   +    +QY + R  S+     D
Sbjct: 410 EHVCDILGVSAVLINVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHSLL----D 464

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            F D++ D    +     +E   + L L+  LA + + +  +    E   L  YL+ L +
Sbjct: 465 NFRDVNLDDIKPDWKHFATEPADA-LDLLYALARFDQSVWQSKEQLEACVLVNYLFGLCN 523

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    R   RL   Q ++++  + RL L +A    +  G+ ++G+   ++M
Sbjct: 524 A------TSRALKRLPVKQESSQEKQLQRLLLFNAAKKTLRQGMELLGLRPLDQM 572


>gi|326476808|gb|EGE00818.1| arginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 584

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 114/577 (19%), Positives = 196/577 (33%), Gaps = 106/577 (18%)

Query: 64  IAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
           IAE+I   ++ D D   D+V  A           +     L  I       G N      
Sbjct: 42  IAEIIQKLVECDEDTAYDAVQWAN----------ASTNADLMLITARLKLKGVNPKQLAE 91

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
            +  +F S N     H GH R  ++G  +++L    G++V +  Y+ D G Q   LA+  
Sbjct: 92  DIASKFSSPNIAKEFHAGHLRSTIIGAYISNLYESMGWDVIKVNYLGDWGKQFGLLAVGW 151

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------------- 227
                + L+  +   P  +   VY K       +K +SE      E              
Sbjct: 152 QRFGSEELFAEE---PLKHLLEVYAKINSLFAPEKEASEQARDRGEDTSEIESKGLFAAR 208

Query: 228 -KWLPIVKDYSVQ--AMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             +   ++D      A+ K  RD            LNI+ D++  E        S +   
Sbjct: 209 NAFFQKMEDGDPDAIALWKRFRDVSIERYISTYARLNIKFDVYSGESTV---KSSTVEKA 265

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  +G          +   T   D  +      +  +G  V R  +   G+ TY   
Sbjct: 266 ESLLKEKG-------VYTEDNGTWIIDFKKHG----APHLGVAVARTRI---GTTTYLLR 311

Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           ++A    + E+  FD MIYV+ ++   Y +RL      +        +           G
Sbjct: 312 NIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDVAAKLEHINF------G 365

Query: 396 MPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRFMML 427
             + MS R G    L  ++DE                            +G  +V    +
Sbjct: 366 KVMGMSSRLGTVKILSDILDECGRAMHDVMRKNPAKYEQIENPAEVSDTLGITAVMVQDM 425

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             K      FD  K+    + +   Y QYA+AR  SI R+       +D D         
Sbjct: 426 AGKRIHNYPFDIAKMTSF-EGDTGPYHQYAHARLCSIVRK-------VDIDPKEITTANF 477

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
               +   + ++  +A+YP V  NA    EP  +  YL+ LA      +        ++ 
Sbjct: 478 SLLKEPHAINILRLMAQYPDVTCNALKTLEPTTILTYLFRLAHQVSSGYD------VIKV 531

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           + A + ++ + RL L      ++ +G+ ++G      
Sbjct: 532 IGAESHEIMIARLALYEGARQVLENGMRLLGFSPVKR 568


>gi|325093305|gb|EGC46615.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 642

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/595 (17%), Positives = 214/595 (35%), Gaps = 115/595 (19%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-----------RKILSSIV 106
           G++   +A  +  ++     + S  I    FI ++ + + L           R++     
Sbjct: 29  GVNIDQVAVDLSNKLCAISLISSP-IPKGVFIPIFFNETSLPRLILPYIFDRRQLYGHDK 87

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
           ++G++  +N      KV +EF S N     H GH R  ++G  +++L    G++V +  Y
Sbjct: 88  LAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYKSMGWDVLKINY 147

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--- 223
           + D G Q   LA+       + L+  +S     +   VY+K      +++ +S+      
Sbjct: 148 LGDWGKQFGLLAVGWQKFGSEELFQKES---LKHLLDVYVKINALFKSEQEASKSARDNG 204

Query: 224 ------------FPEEKWLPIVKDYSVQA--MMKIIRD--------DLKALNIQHDIFIS 261
                            +   ++D   +A  + K  RD            LNI  D +  
Sbjct: 205 QDTLEIENRGLYAERNAFFKRMEDRDPEALSLWKRFRDISIERYISTYARLNITFDEYSG 264

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E       P  I  + + L  +G VYE      +++ +   + ++       T       
Sbjct: 265 ESTVR---PETIEKVENMLKDRG-VYE------ENEGSWVINFEKHGARKLGT------- 307

Query: 322 RPLLKSDG-SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             ++++ G + TY   D+A    + E+  FD MIYV+ ++   Y +R+      +     
Sbjct: 308 -AVVRNRGRTTTYLLRDVAAVLERVEKYEFDKMIYVVSAEQDSYFQRVFKTVEIMGYPDI 366

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
              ++   L      G    MS R G    L  ++DE                       
Sbjct: 367 AAKLVHINL------GKAQGMSSRLGTVKLLSDILDECGSAMHEVMRSNEAKYAQVADPE 420

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ---A 468
                VG  ++    +  K      FD  ++    + +   Y+QY++AR  SI R+   A
Sbjct: 421 AVADVVGITAIMAQDMSGKRINNYPFDITRMTSF-EGDTGPYLQYSHARLCSIMRKANLA 479

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            D     DF L            +   + ++  +A+YP +   A    EP  +  YL+ L
Sbjct: 480 ADQVAKADFSLLK----------EPHAIDILRLMAQYPDMTTQAFKTLEPTTILTYLFRL 529

Query: 529 ASVFHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                  +        ++ +  +   ++ + R  L      ++ + + ++G    
Sbjct: 530 THQVSSAYD------VIKVLGTDEGPEVMLARSALHEGARQVLENAMRLLGFTPV 578


>gi|315426742|dbj|BAJ48366.1| arginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 624

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 127/628 (20%), Positives = 225/628 (35%), Gaps = 120/628 (19%)

Query: 28  ILDRIVIERP-----RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDS 80
           +L  + + +P     +D   G +S++ A  L++  G  P+ +A+ +V R+ +     V+ 
Sbjct: 11  LLADVGVGQPRVSLAKDARFGDVSSSDAFDLAKKTGKKPVEMAKELVERMDLSRTVYVER 70

Query: 81  VFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
             +AG G+IN Y   P     I+S     G  YG   +G G  V +E  S NP   +H+G
Sbjct: 71  AEVAGAGYINFYARWPRLAADIVSEACEKGRSYGETGLGGGQYVLVEHTSVNPNKALHIG 130

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R   +GD+LA L+  +GY V    YI+D+G Q+  L L+ F     ++     +  + 
Sbjct: 131 HARNVCLGDSLARLLKKNGYHVAVANYIDDSGVQMAELLLA-FKHLGYSMEPTKGEKFDE 189

Query: 200 Y----YPGVYLKHVGKELADKYSSELLNFPEEKWLPI--VKDYSVQAMMKIIRDDLKALN 253
           Y    Y  V  +       +    +L    E+       +    V+ ++         L 
Sbjct: 190 YCGRVYTEVSKRIEADPRLETLRRQLAAQLEDHDSETSQLNRLVVERVLMEQLRTCWRLG 249

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            ++D+   E D          ++   L   G +Y     P K              LF  
Sbjct: 250 ARYDVLNKESDI--LFFDLWSEVFKRLREMGVLYVAEEGPKK-----------GCWLFDL 296

Query: 314 T---MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE------------RGFDNM------ 352
           +    +  + D  ++KSDGS TY A D  Y   K              +  DN       
Sbjct: 297 SGHPKLSKEGDEVVVKSDGSTTYVARDFGYAAWKLGLLDKDFRYKLLAKNPDNSPVYITD 356

Query: 353 ---------------IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                          I V+        + +      +    ++      E+V L +    
Sbjct: 357 RGGAETHKYGNASFTINVVDVRQKRPQEIVRYALEKLGADPSRYIHYAYEVVSLSKADAE 416

Query: 398 -----------IKMSKRAGDFITLR---------------------------HVVDEVGS 419
                      + MS R G ++ +                             V +++  
Sbjct: 417 RLNLNVGERGFVHMSGRGGIYVNVDPLLDYVKQKAAEGARQRHPDWSESRVSEVAEKIAV 476

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++R+ ++     +++ FD  +  +  + +   Y+QYAYAR   I  +A           
Sbjct: 477 AAIRYFLIRADPDKMIVFDSEEASD-IEGDTGPYIQYAYARATRILEKAD---------- 525

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              N     +  D  E+ LI  +   P V E A       ++A YL +LA  F+  + + 
Sbjct: 526 TQPNPQNPPTTLDPKEIMLIKQIGMLPLVYEEAVRNLSVKRIATYLRELAFAFNDFYENC 585

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVA 567
                   V + + K+ + RL LV A  
Sbjct: 586 -------PVLSADEKVKVFRLALVEAFR 606


>gi|303390226|ref|XP_003073344.1| arginyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302490|gb|ADM11984.1| arginyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 563

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 117/621 (18%), Positives = 237/621 (38%), Gaps = 101/621 (16%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIER---PRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F+   K  ++++    K   + ++R + E+   P+         N  + L +     P  
Sbjct: 2   FNELFKKVVEQVSNVSKFSPEEIERCM-EKSCQPKKP-------NVTLFLIKISS-SPQE 52

Query: 64  IAELIVARIKID--PDVDSVFIAGK--GF-INLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            A+ +   ++      + ++ I G    F IN     + L+ +L  I  +   +G N IG
Sbjct: 53  DAKELHEALEKASIELIQNLAIRGPSVCFDIN---KKAILKDVLGYIQSNKETFGNNSIG 109

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG ++ +E+ S N     H+GH R  ++G  + +L+  SGYE     Y  D G Q   + 
Sbjct: 110 KGKRMVVEYSSPNIAKIFHIGHLRTTILGQFIVNLLKASGYETVSMNYFGDWGKQFGFVL 169

Query: 179 LSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVK 234
           L    +  ++ L  +        Y  +          D  + E+    EE   +W   + 
Sbjct: 170 LGYSKYGSEEELEKDPLKHLFNVYVKISADAKENPEVDLEAREIFRKMEEENDEWCMNLW 229

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               +  ++  +   + LN++ D++  E  +++      ++I++                
Sbjct: 230 KRFRELSVEKYKSLYERLNVRFDVYSGESLYNKKG----KEIVEAYKE------------ 273

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
                 K D D  ++      +G +    ++K+DG+  Y   D+A    + E+   + +I
Sbjct: 274 -----VKTDEDGSKVF----DLGKNRKVLVMKNDGTTLYITRDIAAAIERLEKYSPEKII 324

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+ ++ + + + L  +   +   +++   +   LV          MS RAG    L  +
Sbjct: 325 YVVSTEQNKHFEDLFKILGILGHDESKFLHVSYGLV--------AGMSTRAGKAQFLEDI 376

Query: 414 VDE--------VGSDSVR---------------------FMMLWRKNSELLDFDFCKVKE 444
           + E        + SDS +                      M    +  +  +FD  K + 
Sbjct: 377 IQESTSVMKKVMMSDSTKNSFTMDEIDQTAEVLAISTLLVMDFTARRVKGYEFDIEK-RA 435

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           ++      Y+QYA+ R +SI  +      + D D    N I            L+  L  
Sbjct: 436 RNTSGTGPYLQYAHCRLKSIESR------NSDVDYSDINTIDFSLIHVPEVFNLVYKLLW 489

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           +   +E      EP ++  YL DLAS  +   +  +       V    ++L   RL ++ 
Sbjct: 490 FEHAVEKCLDDYEPSRIVTYLQDLASCVNVAINSLK-------VLGVEKELARARLLVLS 542

Query: 565 AVASIINSGLNIIGVESPNEM 585
           +   ++++GL I+G    N+M
Sbjct: 543 SARIVLHNGLKILGATPLNKM 563


>gi|322380143|ref|ZP_08054391.1| arginyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147448|gb|EFX42100.1| arginyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 340

 Score =  267 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/359 (30%), Positives = 183/359 (50%), Gaps = 27/359 (7%)

Query: 20  CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79
            K  +E+ +   +++E P+D + GH ++  A  L++     P  IA  +V R+  D +  
Sbjct: 5   IKTLLERVLQTEVILEHPKDRSLGHYASVVAFPLAKVYKKPPKIIALELVDRLLEDEECQ 64

Query: 80  SVFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
           +VF    A  G+IN  L  S+L +  +  +  G+++G+    K   + +EFVSANPTGP+
Sbjct: 65  AVFAKIEALNGYINFTLKESFLDRFCNQALKLGVDFGK-EADKNESLYLEFVSANPTGPL 123

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+ GD+  +L  F GY V  EYY+ND GAQI  L LS++    + + +   + 
Sbjct: 124 HIGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSLWLAICE-MQHLKVEY 182

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P  YY G Y+  + ++  + +    LN  +      + D++ + ++  I   L  L I  
Sbjct: 183 PTEYYRGAYINELAQKALEHFPD--LNNNDPNLYATLGDFAKEVVLAQIEQSLADLGIVI 240

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + + SE    R   +   ++   L + G VYE                   +   +S+M 
Sbjct: 241 ENYASE----RAMFAHQEEVFKRLEQAGGVYEF----------------EGKRWLKSSMF 280

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           GD+ DR + K+DG +TY A D+ Y   K+++GFD+ I + G+DH GYV R++A    + 
Sbjct: 281 GDEKDRVIRKNDGDFTYIAGDITYHDYKFKQGFDHYINIFGADHHGYVARIKAALQFLG 339


>gi|157137800|ref|XP_001664040.1| arginyl-tRNA synthetase [Aedes aegypti]
 gi|108869646|gb|EAT33871.1| arginyl-tRNA synthetase [Aedes aegypti]
          Length = 557

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 108/520 (20%), Positives = 197/520 (37%), Gaps = 76/520 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R      V++     R +  +  K  IEF S N   P H GH R A++G+ LA++    G
Sbjct: 81  RNQFMENVLNDFSIQRRIQEETPKTLIEFSSPNIAKPFHAGHLRSAIIGNFLANIYHHLG 140

Query: 159 YEVTREYYINDAGAQINTLALSVFWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           ++V +  Y+ D G Q   L + V  +   ++ +  N   +    Y   Y +    E    
Sbjct: 141 HDVVKLNYLGDWGTQFGFLKMGVELKGLSREDIRKNPIKMLYKAYVYAYTQASTNEELQS 200

Query: 217 YSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +  + +  E+  L  +  +       +  +R     L I  D +  E  +  GD   I 
Sbjct: 201 RARTIFSDMEQGKLKDLDGWTDYRSYTVDELRKVYDRLGITFDQYHWESQYGIGD---IA 257

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++  L   G +                  D  + + +        + P++KSDGS  Y 
Sbjct: 258 HVVSRLQENGLL---------------ITQDDGRKVVKVG----PRNIPIVKSDGSTLYL 298

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             D+A    +++R  FD  IYV+ +  S +   L ++A  +    A   V         +
Sbjct: 299 TRDIAALIDRHQRFTFDKAIYVVDNAQSDHFAALASIAQQMGLPYASDIVH-------VK 351

Query: 394 DGMPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRFM 425
            G    MS R G+ + L  ++DE                            +G+ +V   
Sbjct: 352 FGRVHGMSTRKGNAVFLSDILDEAEALMRHKQVKKSTTKVDVINNPEVTSTLGTTAVVVN 411

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L ++     DF + K   Q+  +    +QY + R  S+ + A +  P  D +     ++
Sbjct: 412 DLKQRRMRDYDFSWDKAL-QTDGDCGIKLQYTHCRLWSLVKNADECCP--DNEQCQPKLL 468

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
           P     +   L LI  +A Y  ++  A   QE   L  YL+ L +         R    +
Sbjct: 469 P-----EPEALHLICEIANYDGILTEAADKQEACILVNYLFGLCNA------ANRCVQTM 517

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 +++  + RL+L +   S++  G+ I+G++   EM
Sbjct: 518 NVKNELSKEKRIQRLKLFNTARSVLQHGMQILGLKPLLEM 557


>gi|325093284|gb|EGC46594.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 1295

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 113/608 (18%), Positives = 198/608 (32%), Gaps = 131/608 (21%)

Query: 34   IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
            I+       G L    A+   +  G  P  +   IV  +     + +  ++G   I  Y 
Sbjct: 457  IQWTNSLDKGDL--VLAVPALQIKGKKPAEVTAQIVENLPPSDLIGTPVVSGTH-IQFYF 513

Query: 94   SPSYLRKILSSIVVS-----------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
             P  L K + S ++            G+    +      K+ +EF S N   P H GH R
Sbjct: 514  KPEPLTKTVISSILKNRATYGTNANVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLR 573

Query: 143  CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEG 199
              ++G  LA+L    G++V +  Y+ D G Q   LA           Y N+ +L   P  
Sbjct: 574  STIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANGY------EKYGNEEELIKDPIN 627

Query: 200  YYPGVYLK--------------------------HVGKELADKYSSEL------------ 221
            +   VY+K                              EL  +  +++            
Sbjct: 628  HLFDVYVKINKDVAEQEVPIKELKEKIKQKKENSEDTTELEKELQAKVDVSYDEKARRYF 687

Query: 222  --LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +   +E  L + + +   ++ K  ++    LNI  D +  E       P  +    + 
Sbjct: 688  KSMEDGDEGALVLWRRFRDLSIEKY-KETYARLNIDFDRYSGESQV---KPESLAKAYEA 743

Query: 280  LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +A+ G   E                  K +              +++ DG+  Y   D+A
Sbjct: 744  MAKTGVSEESEGAVIVDFAKHGAKKLGKAI--------------VVRKDGTPLYLTRDIA 789

Query: 340  YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                +  E  FD M+YV+ +    ++ +L  V   V  K       L    +    GM  
Sbjct: 790  AIVERDEEFHFDKMLYVVAAQQDLHLAQLFKVTELVGRKD------LANRCQHVNFGMVR 843

Query: 399  KMSKRAGDFITLRHVVDEVGSDSVRFM----------------------------MLWRK 430
             MS R G    L  ++ +VG      M                             +  K
Sbjct: 844  GMSTRKGTVKFLNDILKDVGEKMHEVMKKNTAKYEQVANPEQTADILGITSVMVQDMSGK 903

Query: 431  NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                 +F+   +    + +   Y+QYA+AR  S+ R+A+        D    +       
Sbjct: 904  RINGYEFNLDDMTSF-EGDTGPYLQYAHARLCSMTRKAE-------IDPSELSSANLSLL 955

Query: 491  FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
             +   + LI  LA +P V+ N T   EP  +  YL+ +  V    +   +       V  
Sbjct: 956  TEPHAIDLIRLLASWPDVVFNTTKTLEPTTVLTYLFRMTHVLSSGYDVLK-------VVG 1008

Query: 551  NNRKLTMM 558
            +  +L   
Sbjct: 1009 SEPELKKA 1016


>gi|240275922|gb|EER39435.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 898

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 113/608 (18%), Positives = 198/608 (32%), Gaps = 131/608 (21%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I+       G L    A+   +  G  P  +   IV  +     + +  ++G   I  Y 
Sbjct: 60  IQWTNSLDKGDL--VLAVPALQIKGKKPAEVTAQIVENLPPSDLIGTPVVSGTH-IQFYF 116

Query: 94  SPSYLRKILSSIVVS-----------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            P  L K + S ++            G+    +      K+ +EF S N   P H GH R
Sbjct: 117 KPEPLTKTVISSILKNRATYGTNANVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLR 176

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEG 199
             ++G  LA+L    G++V +  Y+ D G Q   LA           Y N+ +L   P  
Sbjct: 177 STIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANGY------EKYGNEEELIKDPIN 230

Query: 200 YYPGVYLK--------------------------HVGKELADKYSSEL------------ 221
           +   VY+K                              EL  +  +++            
Sbjct: 231 HLFDVYVKINKDVAEQEVPIKELKEKIKQKKENSEDTTELEKELQAKVDVSYDEKARRYF 290

Query: 222 --LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +   +E  L + + +   ++ K  ++    LNI  D +  E       P  +    + 
Sbjct: 291 KSMEDGDEGALVLWRRFRDLSIEKY-KETYARLNIDFDRYSGESQV---KPESLAKAYEA 346

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           +A+ G   E                  K +              +++ DG+  Y   D+A
Sbjct: 347 MAKTGVSEESEGAVIVDFAKHGAKKLGKAI--------------VVRKDGTPLYLTRDIA 392

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               +  E  FD M+YV+ +    ++ +L  V   V  K       L    +    GM  
Sbjct: 393 AIVERDEEFHFDKMLYVVAAQQDLHLAQLFKVTELVGRKD------LANRCQHVNFGMVR 446

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFM----------------------------MLWRK 430
            MS R G    L  ++ +VG      M                             +  K
Sbjct: 447 GMSTRKGTVKFLNDILKDVGEKMHEVMKKNTAKYEQVANPEQTADILGITSVMVQDMSGK 506

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                +F+   +    + +   Y+QYA+AR  S+ R+A+        D    +       
Sbjct: 507 RINGYEFNLDDMTSF-EGDTGPYLQYAHARLCSMTRKAE-------IDPSELSSANLSLL 558

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +   + LI  LA +P V+ N T   EP  +  YL+ +  V    +   +       V  
Sbjct: 559 TEPHAIDLIRLLASWPDVVFNTTKTLEPTTVLTYLFRMTHVLSSGYDVLK-------VVG 611

Query: 551 NNRKLTMM 558
           +  +L   
Sbjct: 612 SEPELKKA 619


>gi|126459062|ref|YP_001055340.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248783|gb|ABO07874.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 629

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 131/592 (22%), Positives = 226/592 (38%), Gaps = 131/592 (22%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++N  L+ + L  ++   V        + +  G    +E  SANP  P+H+GH R A++G
Sbjct: 75  YLNAELNVARLAGLVFDAVAEMGRRYGSDVCPGGSFLVEHTSANPVHPLHIGHGRNAILG 134

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYL 206
           D+LA L+ F G +V   +Y++D G Q+   A+     R + A        P+     +Y 
Sbjct: 135 DSLARLLKFCGAKVETHFYVDDCGVQVMYAAIGYRAVRKEAAEAVARGAKPDLVVGYIYS 194

Query: 207 KHVGKELADKYSSELLNFPEE-----------KWLPIVKDYS------------------ 237
                   ++   EL    EE           +W+ ++K                     
Sbjct: 195 ATNAVAEINRLKKELTAAGEEEKKREIIAQIDEWVAVLKRLMDVEGGLVNKVVEVLGQRD 254

Query: 238 --------------------------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                                     V  +++  R+ L  L I+ D +  E D       
Sbjct: 255 VAQEAVELNRRYEAGDAEAREAVREVVDLVLRGQRETLARLGIEIDYWDYESDISVWSGE 314

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV----------- 320
            +R I+  L R+                Q  +     ++FR+    +D            
Sbjct: 315 AMR-IVRELQRR--------------WPQYVENKGGAVVFRADKFAEDFKLHEVLDLPKF 359

Query: 321 --DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
                L +SDG+  Y   D+AY   +++RG   +I V+ ++ +     +  +  A+  + 
Sbjct: 360 IPPVTLTRSDGTTLYVTRDVAYALWQWKRGLGKVIRVVSTEQTHEQAHVRIILYALGHED 419

Query: 379 AQINVLL--CELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
           A  NV+    E+V L       KMS R G +I+L  ++DE                    
Sbjct: 420 AAKNVVHYAYEMVNLP----GAKMSARRGQYISLDEILDEAAERSAALVKEANPEVAGVI 475

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  SVR+  L     + ++F +  V    ++N   ++QY Y R  SI  +A+    
Sbjct: 476 AERVGVGSVRYAFLSTGPRKPIEFKWDAVLNM-RQNSGPFLQYTYVRAYSILEKAQ---- 530

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
                  P        E    E  L+V +AE+P V++ A  A  P  +A YL  LA VF+
Sbjct: 531 ------APPARPEIPGEMLPEEKTLVVKVAEWPTVVKEAFQALRPDYVAEYLDGLALVFN 584

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++      P L+        L   RL LV+AV +++ +G  I+G+ +  +M
Sbjct: 585 SYYEK---APVLK----AEEPLRGFRLALVNAVKTVLEAGFYILGIPTLTKM 629


>gi|325969563|ref|YP_004245755.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708766|gb|ADY02253.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 643

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 131/586 (22%), Positives = 228/586 (38%), Gaps = 108/586 (18%)

Query: 86  KGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
            G++N+ ++   Y   +LS+I     +YG +     +   IE  SANP  PMH+GH R A
Sbjct: 80  NGYLNIDINIRDYANIVLSTINSLSDKYGISEKCPSSSYIIEHTSANPAKPMHIGHGRNA 139

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPG 203
           V+GD+LA L+ F G  V   +Y+ND G Q+  + +  +      L   N+   P+     
Sbjct: 140 VLGDSLARLLRFCGASVRVHFYVNDCGDQMPYVGIGYYVAKDLVLNRVNNGWKPDDVMGI 199

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIV------KDYSVQAMMKIIRDD-------LK 250
           +Y          + S ++  F  E            +D  +  +   +  D       LK
Sbjct: 200 IYSVTYAVSEIKRLSKQIEQFKSEGKYEDANKLISERDEWISVINNFMERDKELTETLLK 259

Query: 251 ALNIQHD----IFISEDDFHRGDP---SPIRDIID--------NLARQGYVYEG------ 289
            L    D    +      +  GD      IR+ +D         L R G  ++       
Sbjct: 260 GLGKFEDLPLMVKQWSRAYEEGDEFVRKVIREAVDIVLKGFRITLDRLGISFDSWDFESE 319

Query: 290 ----------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-------------PLLK 326
                     ++     K  Q  + D   ++FR+     D+                LL+
Sbjct: 320 VAVDNGGTSRVINELLRKVPQYVERDDGAVVFRADKYAQDLGLWNELKLPKYIPKATLLR 379

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINV 383
           SDG+  Y   D+AY    ++   FD +I V+GS+ +    +L+    A+       ++  
Sbjct: 380 SDGTSLYLTRDIAYALWFWDNFKFDRLIRVIGSEQAHPQAQLKLALHAMGYHDLARKLIH 439

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------VGS 419
              E+V L      +KMS R G +I+L  +++E                        V +
Sbjct: 440 YSYEMVNLA----GMKMSGRKGVYISLDELLNEAKDRIMEIVKNRFSPDEANRVAEAVAT 495

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++R+  L    ++ L F + KV    K+N   +VQY Y R   I  +A +I        
Sbjct: 496 GAIRYSFLSVSPNKPLTFSWDKVLNL-KQNSGPFVQYTYVRTNGILEKAGEIPK---LTQ 551

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            P N+          E +LI+ L EYP VI  A        +  Y+  L+ VF+ ++   
Sbjct: 552 IPNNIAG-------EERELILLLGEYPEVIARAAQELRLENIIEYVNKLSLVFNSYYE-- 602

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +   + A    +   R+ LV+A+ +++ + + I+G+     M
Sbjct: 603 ----KYPVLNAE-AGIREFRINLVNAMRTVLGNAMGILGIPRLRRM 643


>gi|13542151|ref|NP_111839.1| arginyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|14325582|dbj|BAB60485.1| tRNA synthetase Arg [Thermoplasma volcanium GSS1]
          Length = 545

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 130/613 (21%), Positives = 251/613 (40%), Gaps = 98/613 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F D    +   + E+       K   + + ++      H   +     ++++P G  
Sbjct: 1   MLIFQDIRKLIFERVNEVH------KTPENDVYVDPT---GHSDFTVRVFRLINQPDG-- 49

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
                E ++ +I+   ++    +   G+IN+YL    + + L   V    +Y  +   + 
Sbjct: 50  -REKIEKMIEKIRTIENISGAKLEN-GYINIYLDKRGVLRYLLDYVEKYGKYP-DTFQEP 106

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V++E  SANPTGP+H+G  R +++GD+++ L+   GY VT++Y++ND+G Q+    LS
Sbjct: 107 ERVSVEHTSANPTGPLHIGRARNSIIGDSISRLLGRFGYRVTKQYFVNDSGKQM----LS 162

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           ++  Y++       D     Y  +Y +    +  ++     L   E     I       A
Sbjct: 163 LYTAYEKYNGPMTMDNLLQDYQKIYKEIEKDKSVEEEIENNLMRYERADPNIYGKLREIA 222

Query: 241 --MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M++ I   L  + I  D F  E DF R     +   I++           + P +   
Sbjct: 223 GVMLQGITGTLAKVWIGFDEFNWESDFIR--SGEVEKAIES-----------VNPSEEGG 269

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  ++  +++              L +SDG+  YF+ D+AY   K +  FD +I V+G 
Sbjct: 270 AKYIEVGGRKVF-------------LTRSDGTTLYFSRDIAYHLYKAQ-NFDWIINVLGE 315

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH  + K LE V   +   +++++ +    + L       KMS R G+ +TL  +++   
Sbjct: 316 DHKEHGKLLEHVMKGIMNIESKMSFVYYSFITL----ESGKMSTRRGNIVTLEDLIERTF 371

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    + S S+RF ++     + + F + +     + N  
Sbjct: 372 EEALRIVREKRPDLEEERMKEIAKVIASSSIRFNIIRVSAPKPITFRWDEALNF-EGNSA 430

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++ Y YAR  SI ++ +    D              +E D  E +L+  +  YP V+ +
Sbjct: 431 PFIMYTYARGASIIKKKERDEKDFS------------TEMDHEEEELVRQMYLYPYVLSD 478

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A     P  +A YL DLA  F+  +   R       V      +   R++L+     I+ 
Sbjct: 479 AAQNLRPDIIAGYLIDLAQKFNDFYKACR-------VIGAPDGVYDRRIRLIETYMKIVE 531

Query: 572 SGLNIIGVESPNE 584
              +I+G++   E
Sbjct: 532 DAGDILGIKMLEE 544


>gi|262341218|ref|YP_003284073.1| arginine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272555|gb|ACY40463.1| arginine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 584

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/631 (16%), Positives = 238/631 (37%), Gaps = 93/631 (14%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    D    ++   KE    +  + +    +  +  +    G L T     LS+ L   
Sbjct: 1   MN---DHFQSIEEIAKE-SISVLYKLEPCPELDFQYTKKGYPGDL-TLILFSLSKKLKEP 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              I + I   ++        F   +GF+N     +Y   +L  ++ +   + +      
Sbjct: 56  AEQIGKNIGNYVQNQLKELIQFSVIEGFLNFIFKENYYIHLLKKMLNTNFYHLK---LPS 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ IE+ S N   P+H+GH R +++G ++A ++   G+++ +   IND G  I    ++
Sbjct: 113 KRIMIEYSSPNTNKPLHLGHVRNSLIGSSIAKILKMVGHKIIKIQIINDRGIHICKSMIA 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------FPEEKWLPIVK 234
            + ++ +    +   +   ++ G Y     K   ++                 + L   +
Sbjct: 173 -WKKFGKGETPDSIKMKGDHFVGKYYSLFDKIYREEIRKTSKQDKIPILIEARELLKKWE 231

Query: 235 --DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
             D + +++ K +         +  + L I  D    E + ++      ++II     +G
Sbjct: 232 CGDPTTRSIWKKMNKWVYNGFEETYRKLEISFDKIEYESNVYKIG----KEIIKKGLEKG 287

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
             ++                +   +       G D  + LL+SD +  Y   D+     +
Sbjct: 288 IFFKK---------------EDGSIWIDLIQEGFD-QKLLLRSDQTSVYITQDIGTSVER 331

Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSK 402
           + +   D ++Y++G +   + + L ++   +      ++  L  E+V L       +M  
Sbjct: 332 FRKYNIDQLVYIVGKEQDYHFQILFSILKRLGYIWVNKLFHLSYEMVYLPSG----RMKS 387

Query: 403 RAGDFITLRHVV----------------------------DEVGSDSVRFMMLWRKNSEL 434
           R G+ I     +                            + +G  ++++  L     + 
Sbjct: 388 REGNVIDADSFILEMYSIAKKNFLKKTSKSKEKVEQEKSYEILGLGALKYYFLKIDPRKK 447

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + F   K  +  K     Y+QY Y+R RS+ R+  ++   L+             +FD  
Sbjct: 448 IIFYPEKSIDF-KGKTGTYIQYTYSRIRSLERKFFEVCSLLNDYWSN-------IKFDMY 499

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  +I  L +YP +++ +     P  +A Y+Y+++  F+  +   +    L  + +N   
Sbjct: 500 EKNMIKILQKYPSILKKSATTFNPSLIANYIYEVSKTFNLLYEKKKLIDSLDLIHSNIC- 558

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + ++H   +++ SG+N++G++  + M
Sbjct: 559 -----MNIIHVTGNVLKSGMNLLGIKMLDRM 584


>gi|195110603|ref|XP_001999869.1| GI24765 [Drosophila mojavensis]
 gi|193916463|gb|EDW15330.1| GI24765 [Drosophila mojavensis]
          Length = 571

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/530 (19%), Positives = 188/530 (35%), Gaps = 79/530 (14%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             + P      L   + +     +    +   V +E+ S N   P HVGH R  ++G+ L
Sbjct: 86  FQIQPDAFAAHL---LQADSVVPKASAFQEEHVVVEYSSPNIAKPFHVGHLRSTIIGNVL 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---YQQALYNNDSDLPEGYYPGVYLK 207
           A+L    GY  TR  Y+ D G Q   LAL V        +        L   Y       
Sbjct: 143 ANLHQHLGYRTTRLNYLGDWGTQFGLLALGVQLGSISDDRIREAPIETLYNAYVMANKAA 202

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDF 265
               +LA +      +        +  ++    Q  +  +      L +  D +  E  +
Sbjct: 203 AEDPQLAQRARELFTSLEANTDPTLSCEWQKYRQYTIDELTGMYDRLGVHFDSYEWESQY 262

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            + D   I D++  L   G +        +    +   +D +++             P++
Sbjct: 263 SQRD---IGDVLTQLRSAGLL------QREHDGREIVVVDERRV-------------PVI 300

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDGS  Y A D+A    +  R  F  M+YV+ +  + +   L + A A+       +  
Sbjct: 301 KSDGSTLYLARDIAALLERQRRLQFTRMLYVVDNGQADHFNALFSTATAL-------DAS 353

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
           L + ++  + G    MS R G  + LR V++E                            
Sbjct: 354 LKDKLQHVKFGRIRGMSTRQGKAVFLRDVLNEARDVMREKRFASATTKANSTLNDEHVCD 413

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  +V   +L ++     +F + +   Q   +    +QY + R  ++  +  DI    
Sbjct: 414 ILGVSAVLVNVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHNLLERFGDIEL-- 470

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             ++ P      E   D   L ++  LA + + +  A    E + L  YL+ L +     
Sbjct: 471 -AEIKPSWQHLTEEPSD--ALAVLYELARFDQCVWQAKEQLEAHVLVNYLFGLCNA---- 523

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R   RL   Q         RL L  A    +  G+ ++G++  N+M
Sbjct: 524 --TSRALKRLPVKQEKCPDKQSQRLLLFRAAKRTLQQGMRLLGLKPLNQM 571


>gi|145641731|ref|ZP_01797307.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273545|gb|EDK13415.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 419

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/444 (18%), Positives = 171/444 (38%), Gaps = 38/444 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       +I +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++   ++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK  S   
Sbjct: 173 LEKMQHEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQSGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +   L  + +Q +      +++R + +     +   +    +   I+   K +   
Sbjct: 223 YCRTMWKRLVDITMQQNQH----NYNRLNVTLTEKDVMGESLYNPMLPSIVEDLKKQGLA 278

Query: 301 KCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + D   +++        GD +   + K DG + Y   D+A  K +YE    +  +   
Sbjct: 279 -VENDGALVVYLDEFKNKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFS 337

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +  S ++++   +           ++      + L +DG P K   R G  + L  ++D
Sbjct: 338 DTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTVKLADLLD 395

Query: 416 EVGSDSV--------RFMMLWRKN 431
           E    +          ++M+ +K 
Sbjct: 396 EAIERATVLINEKIPIYLMMKKKP 419


>gi|194743500|ref|XP_001954238.1| GF18177 [Drosophila ananassae]
 gi|190627275|gb|EDV42799.1| GF18177 [Drosophila ananassae]
          Length = 570

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 108/532 (20%), Positives = 196/532 (36%), Gaps = 84/532 (15%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L P    + +     +      +       V +E+ S N   P HVGH R  ++G+ L
Sbjct: 86  FQLHPQAFVENVLRNKSNPPPQPNSEH-----VVVEYSSPNIAKPFHVGHLRSTIIGNVL 140

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLK 207
           A+L    GY  TR  Y+ D G Q   LAL V       +    +    L + Y       
Sbjct: 141 ANLHQHLGYRTTRLNYLGDWGTQFGLLALGVELNNVSDKTMQTSPIETLYKAYVVANKAA 200

Query: 208 HVGKELADKYSSELLNFP---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               E+  +            +EK     + Y  Q  ++ +      L +  D +  E  
Sbjct: 201 EESPEITQQARDLFTALEAGTDEKMAKKWQQYR-QYTIEDLSKVYSRLGVHFDSYEWESQ 259

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           + +     IR ++D +     ++       +S   +   +D +++             P+
Sbjct: 260 YSQ---QQIRAVLDRMREADLLHR------ESDGREIVIVDGRRI-------------PV 297

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +KSDGS  Y A D+A    + +R  F  ++YV+ +  + +   L   A+++S++      
Sbjct: 298 IKSDGSTLYLARDIAALLTRLDRFDFSRLLYVVDNGQADHFNALFKTASSLSDR------ 351

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           L  E ++  + G    MS R G  I L+ V+DE                           
Sbjct: 352 LSLENLQHVKFGRIHGMSTRQGTAIFLKDVLDEARDIMREKRNISATTKENTSFDDEHVC 411

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FP 473
             +G  +V   +L ++     DF++ +   Q   +    +QY + R  ++    K++   
Sbjct: 412 DILGVSAVLVNVLKQRRQRDYDFNWKQAL-QVNGDTGIKLQYTHCRLNNLLENFKEVDLE 470

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D+          P E+      L L+  LA + + +  +    E   L  YL+ L +   
Sbjct: 471 DIKPSWDHFATEPLEA------LDLVYELARFDQNVWQSKEQLETCVLVNYLFGLCNA-- 522

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 R   RL   Q   R+    RL L HA    +  G+ I+G+   ++M
Sbjct: 523 ----TSRALKRLPVKQEACRQKQSQRLLLFHAAKKTLQQGIQILGLRPLDQM 570


>gi|119872100|ref|YP_930107.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166232829|sp|A1RS32|SYR_PYRIL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119673508|gb|ABL87764.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 632

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 142/671 (21%), Positives = 258/671 (38%), Gaps = 143/671 (21%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR--PLGLDPLTIAELIV 69
           +   ++   ++     I +   IER +    G+ S       ++     +D   + +  V
Sbjct: 8   REEFEKFVAEVAYAIGIGEVPEIERSKR--FGYFS-------AKFHKYRVDAGKL-KETV 57

Query: 70  ARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEF 127
             +K         I+  G ++N+ L+   + ++    V   G +YG     K     +E 
Sbjct: 58  DSLKSRQFKYLTSISVDGLYLNVDLAVEKVAELTFRAVAEMGDKYGFTDECKIGSFLVEH 117

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
            SANP  P+H+GH R A++GD+L  L+ F G  V   +Y++D G Q+   A+      + 
Sbjct: 118 TSANPIHPLHIGHGRNAILGDSLVRLLRFCGNVVQSHFYVDDCGVQVMYAAIGYNVVKKY 177

Query: 188 ALYNNDSDLPEGYYPGVY------------LKHVGKELADKYSSELLNFPE--------- 226
                    P+     +Y             K + KE  D+   E++N  +         
Sbjct: 178 VDEVLKRTKPDVVIGAIYSAVNAIAEINRLKKELEKEKDDEKRREIINEIDSWVSVLKRL 237

Query: 227 ---------------------EKWLPIVKDYS-------------VQAMMKIIRDDLKAL 252
                                E+   + K Y              V+ ++K  R+ L  L
Sbjct: 238 IDTEGEVINKLVEVLGQRNIVEEAAELNKRYETGDPEVKKIVREVVELVLKGQRETLARL 297

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            I+ D +  E D           ++  L R+                Q  D     ++FR
Sbjct: 298 GIELDSWDYESDI-AVWSGEATRVVSELRRR--------------WPQYIDDRGGAVVFR 342

Query: 313 STMVGDDV-------------DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +    +D                 L +SDG+  Y   D+AY   +  RGFD +I V+ ++
Sbjct: 343 ADKFVEDFKLWDVLDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQARRGFDKVIRVISTE 402

Query: 360 HSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            +     +  +  A+  +    ++     E+V L      +KMS R G +I+L  ++DE 
Sbjct: 403 QTHEQAHVRIILYALGYEDVAKKLIHYAYEMVNLP----GMKMSARRGQYISLDEILDEA 458

Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                 VG  SVR+  L     + ++F +  V    ++N   ++
Sbjct: 459 VERSADLVKEKNPEIAGIIAERVGVGSVRYAFLSTSPRKPIEFKWETVLNM-RQNSGPFL 517

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QY Y R  SI  +A++I          +  IP+E      E +LI+ +AE+P V+  AT 
Sbjct: 518 QYTYVRAYSILEKAQEID-------LKKVAIPKEIL--PEERELILKVAEWPSVVREATR 568

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           A  P  +A +L  LA +F+ ++      P L+        +   RL LV++V +++ +G 
Sbjct: 569 ALRPDYVAEFLDGLALIFNSYYEK---APVLK----TEEPVRSFRLALVNSVKTVLAAGF 621

Query: 575 NIIGVESPNEM 585
            I+G+ +  +M
Sbjct: 622 YILGIPTLTKM 632


>gi|320162608|gb|EFW39507.1| arginyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 618

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 110/589 (18%), Positives = 207/589 (35%), Gaps = 96/589 (16%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINL-YLSPSYLRKILSSIVVSGIEYGR-NLIGKG 120
            +A  I   ++      +        I   +  P++ + +L S +  G +YG    IG G
Sbjct: 60  QLAARIQNELQTSSQAITSVATLGQLIQFGFHRPTFTKDVLHSALTQGSKYGEARSIGAG 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               ++F S N   P H GH R A++G+ L +L+   GY+     Y+ D G Q   L + 
Sbjct: 120 KTAVLDFSSPNIAKPFHAGHLRSAIIGNVLRNLLQAVGYKTVAINYLGDWGKQYGLLGVG 179

Query: 181 -VFWRYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFP--EEKWLPI 232
              +  Q+ L ++    P  +   VY+K          + D+           + + L  
Sbjct: 180 FAKYGSQEKLASS----PLQHLAEVYVKINREAETDPAIHDQARQHFRKMETGDPETLAT 235

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            + +   + ++  R     LN+Q D++  E   H      +  ++D L   G      + 
Sbjct: 236 WRQFKSLSEVEY-RSMYARLNVQFDVYDGESLQHELVQQHVASLVDKL---GVKTASEIA 291

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVG---------DDVDRPLLKSDGSYTYFAADLAYFKC 343
             +S TT    ++   +  +    G               L K++ S TY   D+A    
Sbjct: 292 ASQSDTTTNQALESPPVTLKREDNGALVALFANPQLKPTVLAKANESSTYLTRDIAAAVS 351

Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           ++++   D  +YV+G + + + ++L  +   +   +           R    G    MS 
Sbjct: 352 RWQKYKPDLALYVVGPEQALHFEQLFELLRVLGYSE------YAAACRHVAFGKVEGMSS 405

Query: 403 RAGDFITLRHVVD-------EVGSD----------------------------------- 420
           R G+ + L  V++       E+G +                                   
Sbjct: 406 RTGNMVLLSDVLEEGEQHMREIGEERGLARSERTATSSAESTDDASAADQLVDRARVSRS 465

Query: 421 ----SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
               ++    L  +      FD+ +V  Q+      Y+ Y +AR  S+ R+        D
Sbjct: 466 TALAAIVVQDLKSRRLRGYKFDWNQVL-QTTGTTGPYLLYTHARLCSLKRKMGSNAVAAD 524

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
            D             + S + ++  +A YP  I  A    EP  L   L DLA       
Sbjct: 525 VDWS--------LLSEPSAMYIVDVVAAYPDAIVRAATQLEPSLLVDQLMDLALAVSA-- 574

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  R   V+  + ++   RL L  +    + +GL ++G++    M
Sbjct: 575 -----GLRDLRVKGASEEVARARLALFESARINLANGLCLLGLDPLEAM 618


>gi|195392491|ref|XP_002054891.1| GJ22551 [Drosophila virilis]
 gi|194152977|gb|EDW68411.1| GJ22551 [Drosophila virilis]
          Length = 571

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 109/535 (20%), Positives = 195/535 (36%), Gaps = 89/535 (16%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             + P      L   + +          +   V +E+ S N   P HVGH R  ++G+ L
Sbjct: 86  FGIRPDAFTAQL---LQAKQNPSMEPALREEHVVVEYSSPNIAKPFHVGHLRSTIIGNVL 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L    GY  TR  Y+ D G Q   LAL V           D+ +       +Y  +V 
Sbjct: 143 ANLHQHLGYRTTRLNYLGDWGTQFGLLALGVQLSNVH-----DAQMRAAPIETLYNAYVT 197

Query: 211 KELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDD--------LKALNIQHDIFI 260
              A     +L     E    L   KD ++    +  R           + L +  D + 
Sbjct: 198 ANKAAAADPQLAQQARELFSALEAGKDTTMSKQWEQYRQYTIEELTGVYERLGVHFDSYE 257

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  + +      RDI+D L +   +    L   +    +   +D++++           
Sbjct: 258 WESQYSQ------RDIVDVLTQ---LRTAGLLQREEDGREIVVVDQRRV----------- 297

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             P++KSDGS  Y A D+A    + +R  F  M+YV+ +  + + K L    +A+ ++  
Sbjct: 298 --PVIKSDGSTLYLARDIAALLERQQRLRFSRMLYVVDNGQADHFKALFQTVSALDDR-- 353

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
                  + ++  + G    MS R G+ I LR V++E                       
Sbjct: 354 -----FNDKLQHVKFGRIHGMSTRQGNAIFLRDVLNEARDVMREKRSISTTTKVNNTLDD 408

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +G  +V   +L ++     +F + +   Q   +    +QY + R  ++     D
Sbjct: 409 DHVCDILGVSAVLVNVLKQRRQRDYEFSWQQAL-QVNGDTGIKLQYTHCRLHNLL----D 463

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            F  ++      +     +E     L L+  LA + + I  A    E   +  YL+ L +
Sbjct: 464 NFKHIELAEVKPS-WQHLTEEPADALALLYELARFEQCIWQAKEQLEACVVVNYLFGLCN 522

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    R   RL   Q    +    RL L  A    +  G+ ++G++  N+M
Sbjct: 523 A------TSRALKRLPVKQEKCPEKQRQRLLLFRAAKRTLQQGMQLLGLKPLNQM 571


>gi|125777988|ref|XP_001359796.1| GA10066 [Drosophila pseudoobscura pseudoobscura]
 gi|54639546|gb|EAL28948.1| GA10066 [Drosophila pseudoobscura pseudoobscura]
          Length = 572

 Score =  262 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 108/523 (20%), Positives = 189/523 (36%), Gaps = 77/523 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +  +  ++         L      V +E+ S N   P HVGH R  ++G+ LA+L    G
Sbjct: 91  QSFVEQLLRKRQPEALPLSPSDEHVVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLG 150

Query: 159 YEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           Y  TR  Y+ D G Q   LAL V       +         L   Y           E+A 
Sbjct: 151 YRTTRLNYLGDWGTQFGLLALGVQLTNVSDKDMQRAPIETLYRSYVAANKAAEENPEIAQ 210

Query: 216 KYSSELLNFP---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +            ++      + Y  Q  ++ +      L +  D +  E  + +     
Sbjct: 211 RARDLFTALEAGTDDAMAQQWQQYR-QYTIEELSGVYNRLGVHFDSYEWESQYSQ---QQ 266

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I ++++ L   G +                ++D ++++     V DD   P++KSDGS  
Sbjct: 267 ISEVLEKLRSAGLLQR--------------EVDGREIV-----VVDDRRIPVIKSDGSTL 307

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y A D+A    ++ R  F  ++YV+ +  + +   L    AA+ ++      L  E ++ 
Sbjct: 308 YLARDIAALLERHSRLQFSRILYVVDNGQADHFNALFKTTAALDKR------LSLEQLKH 361

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSV 422
            + G    MS R G  I LR V+DE                             +G  +V
Sbjct: 362 VKFGRIHGMSTRQGKAIFLRDVLDEARDVMREKRIQTQTTRSNSSLDDEDVCDILGVSAV 421

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
              +L ++     +F +     Q   +    +QY + R  S+       F D+D +    
Sbjct: 422 LVNVLKQRRQRDHEFSWQHAL-QVNGDTGIKLQYTHCRLHSLLEN----FKDIDLEDIRP 476

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +     S+     L L+  LA + + I  +    E   L  YL+ L +         R  
Sbjct: 477 D-WQHYSQEPVDALDLLYELARFDQCIWQSKEQLEACVLVNYLFGLCNA------TSRAL 529

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            RL   Q +       RL L  A    +  G+ ++G+   N+M
Sbjct: 530 KRLPVKQESCPLKQSQRLLLFQAAKRTLQQGMQLLGLRPLNQM 572


>gi|167043988|gb|ABZ08674.1| putative DALR anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG3K8]
          Length = 623

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 115/662 (17%), Positives = 230/662 (34%), Gaps = 131/662 (19%)

Query: 11  LKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           + N +KE   KI  EK       V+E  R    G ++ N A +L++ L  +P  IA+   
Sbjct: 6   IINRVKENTSKIINEKGYDKVDFVVEYSR-SGFGDITCNVAFLLAKNLKKNPQEIAQEFA 64

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIE 126
           A   +  D++ V     G+    L+        ++ V+       YG   IGK +K+ +E
Sbjct: 65  AEYILGNDLEKVEAHKSGY----LNFFINNNSFNNTVLPESLKENYGSIDIGKNSKLVVE 120

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S NP   +H+GH R   +GD ++ +++ + Y+V    Y++D+G Q+  + +   +   
Sbjct: 121 HTSVNPNKALHIGHLRNVAIGDAVSRILSKANYDVKVLNYVDDSGLQVADIIVGFKYG-- 178

Query: 187 QALYNNDSDLPEGYYPGVY-----------LKHVGKELADKYSSELLNFPEE-KWLPIVK 234
                   D P+G     Y                K+L  +    L    +         
Sbjct: 179 ----GFSEDPPDGEKFANYCGDTVYVSITSKYESDKDLESRRHEILKELEDSTSETAKFG 234

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               + ++    D +  L   +D    E +           I + +  +  V+       
Sbjct: 235 KTLTRKILSDQLDTVWNLGASYDCLNFESEI--LYSKLWEKIFERMKSENLVHLEDQGDN 292

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK---------- 344
                   + +               D+ +++S+G  TY A D+ Y   K          
Sbjct: 293 VGCWVLPIENED--------------DKIIVRSNGVTTYVAKDIPYAAWKLGVLNDPFNY 338

Query: 345 ------------YER------------GFDNMIYVMGSDHSGYVK---------RLEAVA 371
                       YE               + +I V+ +  +   K           E+  
Sbjct: 339 AKYTTQSNGRILYETTLEKTQEPKQSFAANKVITVIDNRQTNLQKIVTNLMSKFNPESSY 398

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416
             +  +   ++    +++    DG  ++MS R G +I    ++++               
Sbjct: 399 VHLGYEAVTLSSETAKILGNKTDGKDVQMSGRKGLYINADEIIEKLEKHIFLESKGRNDD 458

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       V   ++R+ ++     +++ FD     +  + +   Y+QY+  R   I
Sbjct: 459 LDDASLNEIAHNVAVGTIRYELIKPDLGKIITFDINTSLKL-EGDTCSYIQYSCVRAARI 517

Query: 465 FRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             ++  +   D+ FD                E  LI  +  +   + +A     P  +A 
Sbjct: 518 LEKSGSEPNFDVQFDQLNT----------EYETNLIKQIGLFEIFVNDAAKNHSPKVIAK 567

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           Y YDLA  F   + H      +  ++A+  +L   R  LV +    +   L+++G+ +P 
Sbjct: 568 YCYDLAVAFSSFYEH------VNVLKADTPELINARSCLVSSFKLTLEKALDLLGITAPQ 621

Query: 584 EM 585
            M
Sbjct: 622 RM 623


>gi|195445587|ref|XP_002070393.1| GK12028 [Drosophila willistoni]
 gi|194166478|gb|EDW81379.1| GK12028 [Drosophila willistoni]
          Length = 575

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 108/530 (20%), Positives = 195/530 (36%), Gaps = 80/530 (15%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L P    + L + +          +     + +EF S N   P HVGH R  ++G+ L
Sbjct: 91  FQLKPQVFVEHLLNPIE-----PLAHLPYKEHIVVEFSSPNIAKPFHVGHLRSTIIGNVL 145

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY--YPGVYLKH 208
           A+L  + GY  TR  Y+ D G Q   +A+ V            S +   Y  Y       
Sbjct: 146 ANLHQYLGYSTTRLNYLGDWGTQFGLMAVGVQLSNVSDEEMKASPIATLYKSYVMANKAA 205

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDF 265
                  + + EL +  E      +     Q     I   ++  + L +  D +  E  +
Sbjct: 206 ADDPTVAQRARELFSALEAGTDQTMAKQWHQYRQYTIAELKEVYERLGVHFDSYEWESQY 265

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            +     I  +++ L   G +       P++   Q   +D +++             P++
Sbjct: 266 SQK---QISKVLEQLRSAGLL------LPEADGRQIVVVDNRRI-------------PVI 303

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDGS  Y A D+A    +Y+R  F  ++YV+ +  + +   L    AA+  K      L
Sbjct: 304 KSDGSTLYLARDIAAILDRYKRLDFSRLLYVVDNGQADHFNALFKTVAALDPK------L 357

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
             E ++  + G    MS R G  I LR V+DE                            
Sbjct: 358 SLEHLKHVKFGRIHGMSTRQGKAIFLRDVLDEAKNVMREKRQLSATTKVNSSLDDDLVCD 417

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  +V   +L ++     +F++ +   Q   +    +QY + R  S+     D F  +
Sbjct: 418 ILGVSAVLVNVLKQRRQRDHEFNWQQAL-QVNGDTGIKLQYTHCRLYSLL----DNFKHI 472

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
             +    +      E   + L+++  LA + + +  +    E   L  YL+ L +     
Sbjct: 473 SLEEVKPSWQHFIQEPIEA-LEVVYELARFEQSVWQSKEQLEACILVNYLFGLCNA---- 527

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R   RL   Q    +    RL L  A    ++ G+ ++G++  N+M
Sbjct: 528 --TSRALKRLPIKQETCTQKQTQRLLLFRAAKQTLSKGMELLGLKPLNQM 575


>gi|321261407|ref|XP_003195423.1| arginine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317461896|gb|ADV23636.1| Arginine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 622

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 109/579 (18%), Positives = 201/579 (34%), Gaps = 103/579 (17%)

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV------------SGIEYGR 114
            ++   K D     V      F++   +       L   +               + YG 
Sbjct: 87  KVIDNFKADVFFSGVKTPDNKFLHFAFNKESFTYHLLRQINLTAAASVADPSNHTLAYGT 146

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              G G +V ++F S N   P H GH R  ++G  + +L   +G+ VTR  Y+ D G Q 
Sbjct: 147 TTEGAGKRVVVDFSSPNIAKPFHAGHLRSTIIGAVICNLHEANGWNVTRLNYLGDWGTQY 206

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEE----- 227
             L++  F RY           P  +   VY+K   V  E   K+ +  +   EE     
Sbjct: 207 GLLSVG-FDRYGN--EEELVKDPIHHLFQVYVKINSVRDEQKKKFEAGEIIPDEENIHLL 263

Query: 228 --KWLPIVKDYSVQAMMKI----------IRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
             K    ++D   +A+ +           ++   K LN+  D++  E          I  
Sbjct: 264 AKKVFKDMEDGEPKAIAQWARFRDLSIEKLKGTYKKLNVHFDVYWGESQVSE---ESIER 320

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            +  +  +    E                DR  LL   T    D    + K DG+  Y  
Sbjct: 321 AVRIVQEKNLTCE----------------DRGALLVDLTKFKMDKA-IVRKGDGTSIYLT 363

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DL     KY++  FD  IYV+ +  + +  +L      + E  A         + L   
Sbjct: 364 RDLGGAYDKYQKYKFDKHIYVVQAAQTLHFNQLFKTLELMGEPYAD-------KLELVTF 416

Query: 395 GMPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRFMM 426
           G+   MS R G+ + L  ++ E                            +G+ +V+   
Sbjct: 417 GLVKGMSTRKGNVVFLEDIIAEATDVMHEQMKSNEIKYAQVEDPEGTSAIIGTTAVKIQD 476

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +  +     DFD  +      +    ++QY++ R  S+ R+  ++      +    +++ 
Sbjct: 477 MAGRRINDYDFDIKRCTSFEGDF-GPFIQYSHVRLCSVQRKNPNVLVPQSINEIDLSILD 535

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
                +    ++I+HLA YP  + NA +  EP +L  + + L  +    W   +      
Sbjct: 536 -----EPKVNEIIMHLALYPTHVRNAFLQSEPSQLVTWCFKLGHLVGAAWETVK------ 584

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            V     ++   RL        ++ S + ++ +     M
Sbjct: 585 -VTGQEEEIAKARLFFYVTTREVLASAMRMLSLTPIERM 622


>gi|290988574|ref|XP_002676976.1| predicted protein [Naegleria gruberi]
 gi|284090581|gb|EFC44232.1| predicted protein [Naegleria gruberi]
          Length = 536

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 115/566 (20%), Positives = 217/566 (38%), Gaps = 76/566 (13%)

Query: 64  IAELIVARI------KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           IA  +   I      K D  V++    G  ++N +  P++L K +    V    +     
Sbjct: 3   IASDLAKEISRIVKEKTDVVVENCVGEGP-YVNFFYQPAHLGKAIEE--VHNGNFLSVRE 59

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   V IE+   N     HVGH R A +G++L  L  + GY V    YI D   +   +
Sbjct: 60  SKNENVMIEYSQPNTHKTFHVGHMRNAALGNSLVLLYEWCGYNVHAVNYIGDVVDKQGVI 119

Query: 178 ALSVFWRYQQALYNNDSD----LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           +        +   + + +     P     G+ L  +G+  AD      +N  +E      
Sbjct: 120 SQGFILSQAELGSSENKEKIHIFPADSPVGIELTELGR-KADCNVDASINIGQE--FKK- 175

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++   + +++ + D  K +++   ++     +   D   I    D   R  + +      
Sbjct: 176 RESQCKTLLRAMEDHKKNISM---LWEITRTWSIEDFKSIYKWSD--CRFDHFFHESDVG 230

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCKYER-G 348
            +SK       +  +L+     +G D+ +     LL S G+  Y   DLA  K K+E   
Sbjct: 231 DESKEIVLKAYEEGKLIKSDGAIGADLGKLGFCVLLTSAGTGLYATKDLALAKRKFEEFK 290

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D  +YV+    S + +++      +  ++A+    L   + +  DG   KMS R G+ I
Sbjct: 291 VDRSVYVVDVSQSLHFQQVFKTLEVLGFEQAKKCKHLAYGMVVLPDG---KMSSRKGNII 347

Query: 409 ----------------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
                                        +     ++   ++++ ML + N++ + F   
Sbjct: 348 YFSTLQKSLTQNITDNFMSKYEGEWPKEEIEETTRKIAISAIKYGMLNQDNNKDITFVLK 407

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           +   +S  N   Y+ YAYAR  S+  +   D    +D+ L            D +E +L+
Sbjct: 408 EWASKS-GNTGPYLMYAYARAVSVVNKIGLDSSVTIDYSLLT----------DETERKLL 456

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             + +Y  V+E A    +P  L  +LY+L   +   +        +    A   +L   R
Sbjct: 457 STILQYSIVVERAAEQYKPQLLCIFLYNLCKQYSKMYEA------VSIRDAATPELKQTR 510

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L+LV   A ++  GL ++G+ +   M
Sbjct: 511 LRLVAGFAKVLKHGLGLLGISTAERM 536


>gi|83942562|ref|ZP_00955023.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846655|gb|EAP84531.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 240

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 98/215 (45%), Positives = 143/215 (66%), Gaps = 2/215 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LFAD  S + + L  +     + + +  D I +E PRD AHG ++TNAAM+L++P  +
Sbjct: 1   MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  IAE +  ++  DP + +  +AG GF+NL LS +  + ++ +++  G ++GR  +G+
Sbjct: 61  KPRDIAEKLAEKLAEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA 
Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           SV+ RY +A +  +   PEG YPG YL  VG  L 
Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALK 214


>gi|258565281|ref|XP_002583385.1| arginyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237907086|gb|EEP81487.1| arginyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 699

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 104/643 (16%), Positives = 214/643 (33%), Gaps = 117/643 (18%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIAELIVA 70
           + ++ E+   I  ++       ++       G L     A+ +    G  P  +A  I A
Sbjct: 39  RAHIAELVGPIVGKEPEFVYTRLQWTNTLEKGDLLLAVPALQIK---GKKPADLAGEIAA 95

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
                  V+     G   +  +     L K +   ++            G+   R+    
Sbjct: 96  NFPESDLVEPPVAMGTH-LQFHFRAQPLIKTVIPSILKNKATYGTNANIGLRDPRDPSQG 154

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA---GAQINT 176
             ++ +EF S N   P H GH R  ++G       A S ++    Y+ N     G +   
Sbjct: 155 KKRIVVEFSSPNIAKPFHAGHLRSTIIGGFPGE-FAHSLWDGNMAYWPNGYKMYGNEEEL 213

Query: 177 L------ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG------------------KE 212
           L         V+ +  + +   +  + +       +K  G                   E
Sbjct: 214 LKDPINHLFEVYVKINKDVAEQEGPIKDLKERIKVIKDKGEDAAALEKELDTLVAASWDE 273

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            A +Y   + +  E+  L + + +   ++ K  R     LNI  D++  E    +   S 
Sbjct: 274 KARQYFRSMEDGDEDA-LALWRRFRDLSITKY-RQTYARLNIDFDVYSGESQVKQESLST 331

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGS 330
           + +    +  +G                  +     ++   T  G        +++ DG+
Sbjct: 332 VYNT---MQEKG----------------VSEDSEGAIIVDFTKHGAKKLGKAIVVRKDGT 372

Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             Y   D+A    +     FD M+YV+ +    ++ +L      +  K       L +  
Sbjct: 373 PLYLTRDIAAIFERETAFNFDKMLYVVAAQQDLHLAQLFKTVELMGRKD------LADKC 426

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSVRF----------------- 424
           +    GM   MS R G    L  ++ +VG         ++V++                 
Sbjct: 427 QHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMRKNAVKYEQVENPVETADTLGITS 486

Query: 425 ---MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
                +  K     +F+   +    + +   Y+QYA+AR  S+ R+A+        D   
Sbjct: 487 VMVQDMSGKRINGYEFNLEDMTSF-EGDTGPYLQYAHARLCSVTRKAE-------IDPAV 538

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                     ++  + L   L+++P V+ NA    EP  +  YL+ +       +   + 
Sbjct: 539 LGSADLSLLTESHAVDLARLLSQWPDVVLNAMKTLEPTTIITYLFRMTHTLSSGYETLK- 597

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                 V  +  +L   R+ L H    ++N+G+ ++G+     
Sbjct: 598 ------VVGSEPELKKARMALYHCARQVLNNGMRLLGLNPVES 634


>gi|16081423|ref|NP_393761.1| arginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|39932237|sp|Q9HLE7|SYR_THEAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|10639424|emb|CAC11426.1| arginine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 546

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 127/614 (20%), Positives = 247/614 (40%), Gaps = 97/614 (15%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF D    +   + +   +I      LD        D  H  ++     IL  P G +
Sbjct: 1   MLLFQDLRKDIYEIVSK-RFRISENDVYLD--------DTGHSDITIRVFRILKSPDGGE 51

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              +   IV  I     V+     G G+IN+++  +Y+ + +   +     Y  ++  + 
Sbjct: 52  NAVM--EIVRSISEKDYVEKALSEG-GYINVWIKRTYMLREVLESIEKSGTYP-DVFQEA 107

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V++E  SANPTGP+H+G  R +++GD++  +++  GY   R+Y++ND+G Q+    +S
Sbjct: 108 ERVSVEHTSANPTGPLHIGRARNSIIGDSIYRILSRYGYRTVRQYFVNDSGKQM----IS 163

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           ++  Y +       +     Y  +Y +    +  +K   + +   E     +       A
Sbjct: 164 LYTAYIKYGGPITIENLLENYQKIYREMEKDQSIEKEIEKNIERYENADPEVFGTLRKIA 223

Query: 241 --MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             M+  I   LK + I+ D F  E D        +R  ID L  +           +  +
Sbjct: 224 GVMLDGIASTLKRIGIEFDEFDWESDL--LLNGSVRKAIDMLETK-----------EEDS 270

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  ++  K++              L + DG+  YFA D+AY   K E   + +I V+G 
Sbjct: 271 ARYIEISGKKVF-------------LTRKDGTTLYFARDIAYHLFKAE-NSEWIIDVLGE 316

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           DH  + K L  V   + + + +++ +    + L       KMS R G+ +TL+ +VD   
Sbjct: 317 DHKDHAKSLNHVLKEMLKLENRVSFMYYSFITL----ETGKMSTRRGNIVTLQDLVDRTY 372

Query: 417 -------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                                    + S +VR+ ++     + + F + +     + N  
Sbjct: 373 DEALKIVNEKRPDLSEEERKKIAEVIASSAVRYSIIRVSAPKPITFRWEEALNF-ESNSA 431

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            ++ Y++AR  SI  +A +       D+               E  L+  +  YP  +++
Sbjct: 432 PFIMYSHARAASILDKAPEPEQSYGMDMPK------------EEADLVKAMYVYPYYLKD 479

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P  +A YL  L   F+  +   R       V   +      R+++V A   I++
Sbjct: 480 AAQDLKPDLIAAYLISLVQKFNDFYGACR-------VIGTDPLTYARRIRIVKAYKQILS 532

Query: 572 SGLNIIGVESPNEM 585
              ++IG++  ++M
Sbjct: 533 DAGDLIGIKMLDQM 546


>gi|58269318|ref|XP_571815.1| arginine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134114239|ref|XP_774367.1| hypothetical protein CNBG3480 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257002|gb|EAL19720.1| hypothetical protein CNBG3480 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228051|gb|AAW44508.1| arginine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 622

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 104/581 (17%), Positives = 200/581 (34%), Gaps = 107/581 (18%)

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV------------SGIEYGR 114
            ++   K D     +      F++   +       L   +               + YG 
Sbjct: 87  KVIDSFKADVFFSGLKSPDNKFLHFTFNKESFAYHLLRQINLTAAASVADPSNHTLAYGT 146

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
              G G  + ++F S N   P H GH R  ++G  + +L   +G++VTR  Y+ D G Q 
Sbjct: 147 TTEGAGKHLVVDFSSPNIAKPFHAGHLRSTIIGAVICNLHEANGWKVTRLNYLGDWGTQY 206

Query: 175 NTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPEEKWL-- 230
             L++    +  ++ L  +    P  +   VY+K +  ++   K        P+E+ +  
Sbjct: 207 GLLSVGFDKYGNEEELVKD----PIHHLFQVYVKINNARDEQKKKFEAGETIPDEENIHL 262

Query: 231 ---PIVKDYS-----VQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIR 274
               + KD         A     RD          K LN+  D++  E          + 
Sbjct: 263 LAKKVFKDMEDGEPKAIAQWARFRDLSIEKLKGTYKKLNVHFDVYWGESQVSE---ESME 319

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +  +  +    E                DR  LL   T    D    + K DG+  Y 
Sbjct: 320 RAVRIVQEKNLTCE----------------DRGALLVDLTKFKMDKA-IVRKGDGTSIYL 362

Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLY 392
             DL     KY++  FD  IYV+ +  + +  +L      + E    ++  +   LV+  
Sbjct: 363 TRDLGGAYDKYQKYKFDKHIYVVQAAQTLHFNQLFKTLELMGEPYADKLEHVTFGLVK-- 420

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRF 424
                  MS R G  + L  ++ E                            +G+ +V+ 
Sbjct: 421 ------GMSTRKGTVVFLEDIIAEATDVMHEQMKSNEAKYAQVEDPEGTSAIIGTTAVKI 474

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             +  +     DFD  +      +    ++QY++ R  S+ R+  ++      +    ++
Sbjct: 475 QDMAGRRINDYDFDIKRCTSFEGDF-GPFIQYSHVRLCSVQRKNPNVLVPQSINEIDLSI 533

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           + +    D     +I+HLA YP  + NA +  EP +L  + + L  +    W   +    
Sbjct: 534 LNEPKVND-----IIMHLALYPTHVRNAFLQSEPSQLVTWCFKLGHLVGAAWETVK---- 584

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              V     ++   RL        ++ S + ++ +     M
Sbjct: 585 ---VTGQEEEIAKARLFFYVTTREVLASAMRMLSLTPIERM 622


>gi|195036802|ref|XP_001989857.1| GH18567 [Drosophila grimshawi]
 gi|193894053|gb|EDV92919.1| GH18567 [Drosophila grimshawi]
          Length = 571

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 106/530 (20%), Positives = 194/530 (36%), Gaps = 79/530 (14%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +L P    + L   + +     R    +  ++ +EF S N   P HVGH R  ++G+ L
Sbjct: 86  FHLQPDKFTQHL---LQTDPIPFRATDFQEERIVVEFSSPNIAKPFHVGHLRSTIIGNVL 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLK 207
           A+L    GY  TR  Y+ D G Q   LAL V        +        L   Y       
Sbjct: 143 ANLHKHLGYRTTRLNYLGDWGTQFGLLALGVQLGNVSDAEMRAAPIETLYNAYVAANRAA 202

Query: 208 HVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
               +LA +       L    +  +        Q  +  +R   + L +  D +  E  +
Sbjct: 203 ADDPKLAQQARDLFSALEAGTDATMSGQWQQYRQYTIDELRGVYERLGVSFDSYEWESQY 262

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            + D   I +++  L   G +        +    +   +D++++             P++
Sbjct: 263 SQRD---IGEVLAQLRSAGLL------QREQDGREIVVVDQRRV-------------PVI 300

Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           KSDGS  Y A D+A    + +R  F  M+YV+ +  + +   L   A       A+++  
Sbjct: 301 KSDGSTLYLARDIAALLERQQRLQFSRMLYVVDNGQADHFNALFQTA-------AKLDKR 353

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416
           L + ++  + G    MS R G+ I L  V++E                            
Sbjct: 354 LTDKLQHVKFGRIHGMSTRQGNAIFLSDVLNEARDVMREKRSNSSTTKVNVALNDDELCD 413

Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G  +V   +L ++     +F + +   Q   +    +QY + R  S+     D F  +
Sbjct: 414 ILGVSAVLVNVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHSLL----DNFRHI 468

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           +      +      E   + + L+  LA + + +  A    E   L  YL+ L +     
Sbjct: 469 ELAEIKPSWQHLTEEPSDA-IDLLYELARFEQCVWQAKEQLEACVLVNYLFGLCNA---- 523

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R   RL   Q    +    RL L HA    +  G+ ++G++  ++M
Sbjct: 524 --TSRALKRLPVKQEKCLQKQTQRLLLFHAAKRTLQQGMQLLGLKPLDQM 571


>gi|195157366|ref|XP_002019567.1| GL12462 [Drosophila persimilis]
 gi|194116158|gb|EDW38201.1| GL12462 [Drosophila persimilis]
          Length = 572

 Score =  261 bits (667), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 112/527 (21%), Positives = 196/527 (37%), Gaps = 85/527 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +  +  ++         L      V +E+ S N   P HVGH R  ++G+ LA+L    G
Sbjct: 91  QSFVEQLLRKRQPEALPLSPSDEHVVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLG 150

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y  TR  Y+ D G Q   LAL V     Q    +D D+       +Y  +V    A + +
Sbjct: 151 YRTTRLNYLGDWGTQFGLLALGV-----QLTNVSDKDMQRAPIETLYRSYVAANKAAEEN 205

Query: 219 SELLNFPEE--KWLPIVKDYSVQAMMKIIRDD--------LKALNIQHDIFISEDDFHRG 268
            E+     +    L    D ++    +  R             L +  D +  E  + + 
Sbjct: 206 PEIAQRARDLFTALEAGTDDAMAQQWQQYRQYTTEELSGVYNRLGVHFDSYEWESQYSQ- 264

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               I ++++ L   G +                ++D ++++     V DD   P++KSD
Sbjct: 265 --QQISEVLEKLRSAGLLQR--------------EVDGREIV-----VVDDRRIPVIKSD 303

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           GS  Y A D+A    ++ R  F  ++YV+ +  + +   L    AA+ ++      L  E
Sbjct: 304 GSTLYLARDIAALLERHSRLQFSRILYVVDNGQADHFNALFKTTAALDKR------LSLE 357

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VG 418
            ++  + G    MS R G  I LR V+DE                             +G
Sbjct: 358 QLKHVKFGRIHGMSTRQGKAIFLRDVLDEARDVMREKRIQTQTTRSNSSLDDEDVCDILG 417

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
             +V   +L ++     +F +     Q   +    +QY + R  S+ +     F D+D +
Sbjct: 418 VSAVLVNVLKQRRQRDHEFSWQHAL-QVNGDTGIKLQYTHCRLHSLLQN----FKDIDLE 472

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
               +     S+     L L+  LA + + I  +    E   L  YL+ L +        
Sbjct: 473 DIRPD-WQHYSQEPVDALDLLYELARFDQSIWQSKEQLEACVLVNYLFGLCNA------T 525

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            R   RL   Q +       RL L  A    +  G+ ++G+   N+M
Sbjct: 526 SRALKRLPVKQESCPLKQSQRLLLFQAAKRTLQQGMQLLGLRPLNQM 572


>gi|156555207|ref|XP_001604101.1| PREDICTED: similar to GA10066-PA [Nasonia vitripennis]
          Length = 564

 Score =  259 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 103/548 (18%), Positives = 206/548 (37%), Gaps = 81/548 (14%)

Query: 73  KIDPDVDSVFIA-GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
             +  ++ V I+  K  ++  L   +  K L   + + +     +  +   + ++F S N
Sbjct: 63  DSEDFLERVEISQKKPELHFELYRDHYVKNLLDSIQAKVVPPEFMCEQPKNILVDFSSPN 122

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN--TLALSVFWRYQQAL 189
              P HVGH R  ++G+ +A++  +    V R  Y+ D G Q     L LS+    ++ L
Sbjct: 123 IAKPFHVGHLRSTMIGNYIANINNYFKNNVKRINYLGDWGTQFGFVQLGLSLSRVSEETL 182

Query: 190 YNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIR 246
             +  + L + Y     L      +AD+           ++  L   + +  +  ++ + 
Sbjct: 183 KKHPIETLYKAYIYAHKLAEDDPNIADQAREVFRKLENGDDSSLSEWESFR-KYTIEELD 241

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                L ++ D +  E  +        R++I  L R   ++        S+  +   ++ 
Sbjct: 242 RTYNRLGVEFDEYEWESMYSINAS---RNVIAELQRLNLLH------TDSQDKKVIQLNE 292

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVK 365
           K+ +             ++KSDGS  Y   D+A    +YE+  FD M YV+ +  + +  
Sbjct: 293 KRCV------------TIIKSDGSSLYITRDIAAAISRYEKNRFDTMYYVVDNAQTDHFI 340

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-------- 417
            L  V +A+    A         ++  + G    MS R G  + L+  +DEV        
Sbjct: 341 NLIGVLSAMKLPWAD-------RLKHVKFGKIKGMSTRKGTAVFLQDFLDEVKAVMKEKQ 393

Query: 418 --------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                               G  +V    L  K  +  +FD+ K  E  K +    +QYA
Sbjct: 394 MQSPTTKVNLDYDDPSTEILGVSAVIINDLKHKRHQDYEFDWNKALEM-KGDTGITLQYA 452

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           + R  S+   +                       + +   L+  + ++   +  +    E
Sbjct: 453 HCRLVSLEENSGATIASECIPSL---------LTEPTAEDLLYIIGKFDEAVIKSYQELE 503

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           PY L  YL+ L+          +    LR ++    +L   RL L+++   I+  G+ ++
Sbjct: 504 PYTLVHYLFQLSHA------TSKALKVLR-IKGEPTELANQRLLLMNSARKILAQGMKLL 556

Query: 578 GVESPNEM 585
           G++  N+M
Sbjct: 557 GLKPLNKM 564


>gi|145591957|ref|YP_001153959.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166232828|sp|A4WLP0|SYR_PYRAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145283725|gb|ABP51307.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 630

 Score =  259 bits (662), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 126/592 (21%), Positives = 229/592 (38%), Gaps = 132/592 (22%)

Query: 88  FINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           ++N  L+   L +++   V   G +YG     +     +E  SANP  P+H+GH R A++
Sbjct: 77  YVNADLNAKRLGELVFEAVAKMGKKYGFTEECQLGSFLVEHTSANPIHPLHIGHGRNAIL 136

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY- 205
           GD+LA L+ F    V   +Y++D G Q+    +       +A    +   P+     +Y 
Sbjct: 137 GDSLARLLRFCDNRVEVHFYVDDCGVQVMYATIGYNAVRDEAREWIERAKPDLVVGHIYS 196

Query: 206 ----------LKHVGKELADKYSSELLNFPEEKWLPIVKDYS------------------ 237
                     LK   +   D      L    ++W+ ++K                     
Sbjct: 197 ATNAVAEIGRLKKEAERAQDDEHKRSLIGEIDEWVAVLKRLMESEGDLVAKVVERLGQRD 256

Query: 238 --------------------------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                                     V  +++  R+ L  L I+ D +  E +       
Sbjct: 257 VAGEAVELNRRYEAGDPEAKRVVREVVDLVLRGQRETLARLGIEIDRWDYESEL-AVWSG 315

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV----------- 320
               I++ L R+                Q  +     ++FR+    DD            
Sbjct: 316 EASRIVEELQRR--------------WPQYVEYKGGAVVFRADKFVDDFKLWDVLDLPKF 361

Query: 321 --DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
                L +SDG+  Y   D+AY   +  +GFD ++ V+ ++ +     +  +  A+  + 
Sbjct: 362 IPPVTLTRSDGTTLYVTRDVAYALWQARQGFDKVVRVISTEQTHEQAHVRIILYALGFED 421

Query: 379 A--QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
              +I     E+V L      +KMS R G +I+L  ++DE                    
Sbjct: 422 VAKKIVHYAYEMVNLP----GMKMSARRGRYISLDEILDEAAERSASLVKEKSPEIAGVI 477

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
              VG  SVR+  L     + ++F +  V    ++N   ++QY Y R  SI  +A    P
Sbjct: 478 AEKVGVGSVRYAFLSTSPRKPIEFRWEVVLNL-RQNSGTFLQYTYVRAYSILEKA----P 532

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D++    P  ++         E +L+V +AE+P V+  A  A  P  +A YL  LA +F+
Sbjct: 533 DVERASVPEQML-------EEEKELLVKIAEWPSVVREAVRALRPDYVAEYLDGLALLFN 585

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++      P L+ V+     +   R+ LV+AV +++ +G  I+G+ +  +M
Sbjct: 586 SYYEK---APVLKAVEG----VRKFRIALVNAVKTVLEAGFYILGIPTLTKM 630


>gi|295094320|emb|CBK83411.1| arginyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 419

 Score =  257 bits (658), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 81/432 (18%), Positives = 169/432 (39%), Gaps = 35/432 (8%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              ++   +      I++   +     IE P     G  +      L++ L   P  IA 
Sbjct: 1   MKEKIAQLISNNVEGIEMSDIMAS---IEIPPRPDMGDFAFP-CFRLAKVLRKAPNMIAA 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I   I     ++ + +AG  ++N Y+      K +     +  ++G++ IG+G  + I+
Sbjct: 57  DIKEAIGDVDFIEKIDVAGA-YLNFYIKKDVFVKTMIE-AANTDDFGKSDIGEGQTICID 114

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185
           + S N     HVGH R  ++G++L  + +  GY V R  ++ D G Q   L ++   W  
Sbjct: 115 YSSPNVAKNFHVGHLRTTIIGNSLYKIHSKLGYNVVRINHLGDWGTQFGKLIVAYKAWGS 174

Query: 186 QQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMM 242
           ++A+  +  S+L + Y           EL D+  +        +E+ L I + +   +++
Sbjct: 175 KEAVEKDGISELMKLYVKFHEEADKNPELVDEARAWFNKMENGDEEALSIWQWFKDISLV 234

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +     L +  D ++ E  +        + ++D +   G + E       S+     
Sbjct: 235 EY-KRTYNLLGMDFDYYLGESFY----RDKCQAVVDKVKAAGLLKE-------SEGAMIV 282

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
           D+             D     + K DGS  Y   DLA    + +   F   +YV G +  
Sbjct: 283 DLSDY----------DMAPCIITKKDGSSIYATRDLAAIFYRKDTYHFSKCLYVTGQEQK 332

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +  ++  V   +  + A+  ++      +  +G   K+S R+G+ I    ++ +  + S
Sbjct: 333 LHFAQVFKVVELLGNEWAKDQLVHIPYGLVSLEGA--KLSTRSGNIIYAEDILKDAIAKS 390

Query: 422 VRFMMLWRKNSE 433
           +  +      S 
Sbjct: 391 LEIITEKSPKSS 402


>gi|295400646|ref|ZP_06810623.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977227|gb|EFG52828.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 254

 Score =  256 bits (655), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 96/252 (38%), Positives = 149/252 (59%), Gaps = 3/252 (1%)

Query: 1   MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +      R+K  +K  +      +++ +  +++E PR+ AHG  STN AM L+R    
Sbjct: 1   MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPDVILEVPREKAHGDYSTNMAMQLARIAKK 60

Query: 60  DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE IV         V  + IAG GFIN Y+   YL +++  I+ +G  YG   +G
Sbjct: 61  PPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNVG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG KV +EFVSANPTG +H+GH R A VGD+L +++  +G++VTREYYINDAG QI  LA
Sbjct: 121 KGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            SV  RY QAL   D ++PE  Y G  +  +GK+LA+++  + ++  E++ L   ++Y +
Sbjct: 181 KSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYGL 239

Query: 239 QAMMKIIRDDLK 250
           +  ++ ++   +
Sbjct: 240 RYELEKLKKIWQ 251


>gi|330796163|ref|XP_003286138.1| hypothetical protein DICPUDRAFT_150090 [Dictyostelium purpureum]
 gi|325083883|gb|EGC37324.1| hypothetical protein DICPUDRAFT_150090 [Dictyostelium purpureum]
          Length = 716

 Score =  256 bits (655), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 115/635 (18%), Positives = 240/635 (37%), Gaps = 119/635 (18%)

Query: 44  HLSTN----AAMILSRPLGLDPLTIAELIVA-------RIKIDPDVDSVFIAGKGFINLY 92
             + N    A+M+L++    +   I++ I+          +    ++ + I  KG++NL 
Sbjct: 106 DYAINNLVVASMLLNKKDKNN-DYISKKIIDTFESKKKEFEFSEMIEKIEIGSKGYLNLR 164

Query: 93  LSPSYLRKILSSIVV-----------------------SGIEYGRNLIGKGTKVNIEFVS 129
           +S  YL  IL+  +                           +  + L  +  KV ++F S
Sbjct: 165 VSEEYLLDILNLWIKGHEGKGAEADKFKIKNLIYNENNKTDDNNKMLPLRSKKVLVDFAS 224

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N +  +HVGH R   +G+++  ++ + G++V R  +  D G  +  +        Q  L
Sbjct: 225 PNMSKELHVGHLRSIALGESVCRILEYMGHDVERISHAGDFGTPMGIVIAHSLETKQPFL 284

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRD 247
            +    + +  Y G  +    KEL+D YS        +         S   + K     D
Sbjct: 285 RH----IWDKEYKGEIIIPTPKELSDIYSESKARTKTDPEFNKRTLASAAELQKGPPTPD 340

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGY-VYEGILPPPKSKTTQKCDMD 305
              +    ++ +I+  D  R   + + D+++ N+  +G   Y  +LP    + T+K  + 
Sbjct: 341 GGGSDPDIYNAWIALCDASRIGFNQVFDMMNINVNERGESFYREMLPKVIDELTEKGFVK 400

Query: 306 RKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
             +      + G+D    ++ KSDG+Y Y   DLA  K + E     ++Y+     S + 
Sbjct: 401 LSEGRKCIFLFGEDKTPVIVQKSDGAYLYATTDLAAIKHRVENDKQWIVYITDDSQSDHF 460

Query: 365 KRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
           +++  +   A  +  +K +++ L   +V   R     K+S R G  + L  ++ E     
Sbjct: 461 EQIFKIAENAKWLDLEKTRVDHLSFGVV---RGSNGSKLSSRDGSPVALIDLLHESIERA 517

Query: 417 -----------------------------------------------VGSDSVRFMMLWR 429
                                                          +G  ++++  L  
Sbjct: 518 KQATSISKSFTRAEKIDSDQNARDITVPRYLDSDETLDDVTDDHFQKIGLGALKYFDLTH 577

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           +N+    F +  +    K N   Y+ Y Y R  ++F++A      ++ +      +    
Sbjct: 578 RNNS-YIFSYDNMLSF-KGNTSIYILYCYTRISTLFKRANFNIDQINLNEIDFTNLT--- 632

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                E  LI   + +  V+++      P  +  YL+++A+ FH  +   +     R   
Sbjct: 633 ---EKERNLIFLFSRFSDVLKSTEQNLRPGLICDYLWEIANSFHQLYESEKFIGSER--- 686

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                    +L + +A   I+++GLN++GVE+  +
Sbjct: 687 ------QNQKLLICYATQRILSTGLNLLGVETVEK 715


>gi|322792442|gb|EFZ16426.1| hypothetical protein SINV_15311 [Solenopsis invicta]
          Length = 554

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 97/535 (18%), Positives = 194/535 (36%), Gaps = 89/535 (16%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           I+  +S     K +     S +      +  G  + +EF S N   P HVGH R  ++G+
Sbjct: 71  ISFNISRDRCVKEILECNCSTVSAP-TFMNNGKNIVVEFSSPNIAKPFHVGHLRSTIIGN 129

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALS---VFWRYQQALYNNDSDLPEGYYPGVY 205
            +A++ +F   +V +  Y+ D G Q   + L          +   +    L   Y     
Sbjct: 130 YVANINSFVKNKVKKINYLGDWGTQYGLVQLGFDMANIGEDEMRRSPIKALYTAYVTANK 189

Query: 206 LKHVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
           L      + D+      +         +   + K Y+V+ +    +     + I  D + 
Sbjct: 190 LAETDSSILDRARKIFNDLENGTVVTHEQWKMFKQYTVEEL----KTVYNRIGITFDEYH 245

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  +   +   I  +++ +                +   + + DRK +      +G++ 
Sbjct: 246 WESMYSAKNIEEIVTLMEKM----------------QLLTRDEQDRKVV-----SLGNEK 284

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           + P++KSDGS  Y A D+A    ++E   FD M YV+ +  + +   L  +   +    A
Sbjct: 285 NIPIIKSDGSTLYIARDIAAAIDRFENNYFDCMYYVVDNTQANHFLNLLEILKRMQMPWA 344

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------------------------- 414
                  E ++  + G    M  R G+ + L  ++                         
Sbjct: 345 -------ERLKHVKFGRLQGMRTRRGNAVFLEDILDTARDIVKQKQIDSPTTKVCLDSND 397

Query: 415 ---DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              D +G  ++    L RK      FD+       K +    +QY + R  S+ R    I
Sbjct: 398 KSSDILGISAMIVNDLKRKRQRDYTFDWN-AAFDLKGDTGVKLQYTHCRLISLERNCGAI 456

Query: 472 -FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              + +  L    ++            L++ +A++  V+  +    EP  L  YL++L++
Sbjct: 457 LISECEPSLLQEEIVD----------DLVILIAKFEEVVLRSYEEIEPCILTTYLFNLSN 506

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             +          +L  V+     +   RL L H   +++  G+ ++G+    EM
Sbjct: 507 TINK-------AFKLLKVKDEVADVAKQRLLLFHVARNVLAQGMKLLGLIPLEEM 554


>gi|299138914|ref|ZP_07032091.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX8]
 gi|298599068|gb|EFI55229.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX8]
          Length = 661

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 130/681 (19%), Positives = 238/681 (34%), Gaps = 130/681 (19%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
              R+++ L E   K  VE   L  +VIE P     G ++   A  L++ L   P  IA+
Sbjct: 9   IQVRIQSLLAE---KYGVE---LTNLVIELPPKIEFGEMALPVAFELAKRLKKAPRAIAQ 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            + + +   P V SV IAG G++NL L  +   + +++            +G      +E
Sbjct: 63  ELQSALAELPGVASVEIAGAGYLNLKLDRAATVQRIAAD-------EHASVGGAGFRLVE 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMA----FSGYEVTREYYINDAGAQINTLALSVF 182
             S NP    HVGH R A++GD+ A ++       GYE   + YI++ G Q+  + ++V 
Sbjct: 116 HTSINPNKAAHVGHLRNAILGDSFARMLKPDEFKPGYETGVQNYIDNTGVQVADIVVAVT 175

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD----KYSSELLNFPEEKWLPIVKDYSV 238
                 L      L E       L +V  +L       Y S+       K L +   + +
Sbjct: 176 AVKGMTLDAVREWLTELLETNQRLDYVCWDLYAAVSQWYDSDPAQAAARKQLRLDTLHKI 235

Query: 239 QA---------------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
           +A               +++     ++ L I++D    E +            +  +  +
Sbjct: 236 EAGGNDTAEIAELISTGVLRRHLQTMERLGIEYDFLPRESEILHLKFWETARQL--MVEK 293

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFK 342
           G +Y       + K      M R  +   +T+ G D D + +++S+G+ TY   D+AY  
Sbjct: 294 GVLY----LETEGKNKGCWVMRRAGV--EATLEGPDEDAKIIIRSNGTVTYVGKDIAYHL 347

Query: 343 CKYER---------------------------------GFDNMIYVMGSDHSGYVKRLEA 369
            K+                                     D +  V+ S       +++ 
Sbjct: 348 WKFGLLGKDFGYAKFHEYPTHTCWISTMHGEQPHPSFGHADAIYNVIDSRQDDPQTQVKE 407

Query: 370 VAAAVSEKK--AQINVLLCELVRLY---------------RDGMPIKMSKRAGDFITLRH 412
               +  +    +   L   +V L                +    I++S R G  +    
Sbjct: 408 ALRGMGYEAESDRYTHLNYAMVALTPRCAAELGYVLSEEDKARAFIEVSGRKGFGVKADD 467

Query: 413 VVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           ++D                            +G  ++RF  L    + ++ FDF      
Sbjct: 468 LIDRMIAAAQAEVDTRHPELEQAERAAIATAIGVGALRFFTLRFTRNTVIAFDFHDALSF 527

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
             E    Y QYA  R  +IFR+A     +    +   ++    +  + TS  ++ +  + 
Sbjct: 528 DGE-TGPYAQYAAVRAANIFRKAGVPAEEALSKVAALDLASMLTGDEGTSVWEVWLTASR 586

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              V+E A  A EP  LA Y + LA  F+  +           +   +     + L    
Sbjct: 587 LSLVLEQAIAAAEPAMLARYAFQLAQQFNNFYHRHH------ILTETDETRKTLLLATAA 640

Query: 565 AVASIINSGLNIIGVESPNEM 585
                +   L  +G+  P+ M
Sbjct: 641 VARRELVRVLGWLGITVPSAM 661


>gi|205375416|ref|ZP_03228205.1| arginyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 250

 Score =  255 bits (651), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/249 (36%), Positives = 148/249 (59%), Gaps = 3/249 (1%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +     S+LK  +K+   K  +  ++ +  +++E P++ AHG  STN AM L+R    
Sbjct: 1   MNIVDQVQSKLKEEIKQAVIKAGLATEEQIPDVILETPKEKAHGDYSTNMAMQLARVAKK 60

Query: 60  DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            P  IAE + A        ++ + IAG GFIN Y+  SYL  ++  ++ +G  YG +  G
Sbjct: 61  APRMIAEELTANFDRTKASIEKIEIAGPGFINFYMDNSYLTDLIPVVLKAGEAYGESDAG 120

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +G K+N+EFVSANPTG +H+GH R A VGD+L +++  +G+ VTREYYINDAG QI+ LA
Sbjct: 121 EGQKINVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFAVTREYYINDAGNQIHNLA 180

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +SV  RY QAL   +  +PE  Y G  +  + K+L D++  + +   E++     + Y +
Sbjct: 181 MSVEARYFQAL-GQEKPMPEDGYHGADIIGIAKQLVDEFGDKYVEVDEKERYDFFRSYGL 239

Query: 239 QAMMKIIRD 247
           +  ++ +++
Sbjct: 240 KYELEKLKE 248


>gi|195498652|ref|XP_002096615.1| GE24948 [Drosophila yakuba]
 gi|194182716|gb|EDW96327.1| GE24948 [Drosophila yakuba]
          Length = 570

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 113/535 (21%), Positives = 202/535 (37%), Gaps = 88/535 (16%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L P    + L     +              + +E+ S N   P HVGH R  ++G+ L
Sbjct: 84  FQLQPQVFVEQLLQTKGNASH---PSPFAAEHIVVEYSSPNIAKPFHVGHLRSTIIGNVL 140

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L    GY  TR  Y+ D G Q   LAL V     Q L  +D ++       +Y  +V 
Sbjct: 141 ANLHQHLGYRTTRLNYLGDWGTQFGLLALGV-----QLLNVSDKEMQLSPIETLYKSYVA 195

Query: 211 KELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFI 260
              A + + E+           E+       +  Q   K   DDL      L +  DI+ 
Sbjct: 196 ANKAAEQNPEIAQQARDLFSALEEGTDKTMAHQWQQYRKYTVDDLSKVYSRLGVHFDIYE 255

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  + +     I+++++ L   G +       P+    +   +D +++           
Sbjct: 256 WESQYSQ---QHIQEVLEKLRISGLL------QPEHDGREIVVVDGRRI----------- 295

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             P++KSDGS  Y A D+A    +  R  F  ++YV+ +  + +   L   +AA+ ++  
Sbjct: 296 --PVIKSDGSTLYLARDIAALLERLSRFHFSRLLYVVDNGQADHFNALFKTSAALDDR-- 351

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
               L  E ++  + G    MS R G  I L+ V+DE                       
Sbjct: 352 ----LSLEQLQHVKFGRIHGMSTRQGKAIFLKDVLDEARDIMREKRNFSPTTRENYNLDD 407

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +G  +V   +L ++     +F + +   Q   +    +QY + R  S+      
Sbjct: 408 EHVCDILGVSAVLVNVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHSLLHN--- 463

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            F ++D D    +     +E   + L L+  LA + + I  +    E   L  YL+ L +
Sbjct: 464 -FSEVDLDDIKPDWKHFATEPADA-LDLLYALARFDQSIWQSKEQLEACVLVNYLFGLCN 521

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    R   RL   Q  + +  + RL L +A    +  G+ ++G+   ++M
Sbjct: 522 A------TSRALKRLPVKQEPSLQKQLQRLLLFYAAKRTLRQGMELLGLRPLDQM 570


>gi|149002907|ref|ZP_01827818.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758910|gb|EDK65905.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 397

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/439 (20%), Positives = 168/439 (38%), Gaps = 72/439 (16%)

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPI 232
            +     W  ++A+  +  D     Y  +  +       D+ + E    L   +E+ L +
Sbjct: 2   LIVAYKKWGDEEAVKAHPIDELLKLYVRINAEAENDPSLDEEAREWFRKLENGDEEALAL 61

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            + +  +++++  R     L ++ D +  E  ++      +  ++D L+ +G + E    
Sbjct: 62  WQWFRDESLVEFNRL-YNELKVEFDSYNGEAFYN----DKMDAVVDILSEKGLLLES--- 113

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDN 351
                            +      G +    + KSDG+  Y   DLA    +  E  F  
Sbjct: 114 -------------EGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKNEYQFAK 160

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408
            IYV+G + S + K+L+AV   +    +  ++       + ++G   K+S R G+ I   
Sbjct: 161 SIYVVGQEQSAHFKQLKAVLQEMGYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLE 217

Query: 409 ----------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                                     V   VG  +++F  L    +   DFD   +    
Sbjct: 218 PTVAEAVSRAKVQIEAKNPELENKDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFE 277

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    YVQYAYAR +SI R+A           F        S  DT   ++I  + ++P
Sbjct: 278 GE-TGPYVQYAYARIQSILRKAD----------FKPETAGNYSLNDTESWEIIKLIQDFP 326

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
           R+I  A    EP  +A +   LA  F+ +++H R          +       RL L +A 
Sbjct: 327 RIINRAADNFEPSIIAKFAISLAQSFNKYYAHTRIL--------DESPERDSRLALSYAT 378

Query: 567 ASIINSGLNIIGVESPNEM 585
           A ++   L ++GVE+P +M
Sbjct: 379 AVVLKEALRLLGVEAPEKM 397


>gi|301115894|ref|XP_002905676.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262110465|gb|EEY68517.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 480

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 107/511 (20%), Positives = 184/511 (36%), Gaps = 92/511 (18%)

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
             +HVGH R +V+GDT+ +L+ F G+ V+R  +  D G+ + TL + +  +        D
Sbjct: 3   KKLHVGHLRSSVLGDTICNLLEFRGHRVSRISHTGDVGSALATLIVELLEQNVALETLTD 62

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----EKWLPIVKDYSVQAMMKIIRDDL 249
           + L + Y  G     +      K    +L         +  P V+D   +A  ++ R+  
Sbjct: 63  AQLGKYYESGKRRLEMDTVFKHKVDDVVLQLQRLGTNGEVDPKVRDAWTRA-CQVSREAY 121

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           + +  +  + + E       P  +  ++  +   G               Q  +      
Sbjct: 122 QRIFDRLGVNVIERGESTYMP-LVSPVVQKMQDSG---------------QAVESRGALG 165

Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYE-------RGFDNMIYVMGSDHS 361
           +F     G D    L+ KSDG + Y   DLA    +           +D ++YV      
Sbjct: 166 VFLD---GPDKPPMLIRKSDGGFLYATVDLACLHSRIHGFPGVDSTQYDEIVYVTDQSQQ 222

Query: 362 GYVKRLEAVAAAVSE------KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            + K L A A           +  ++      LV L  DG   K+S R G F  L  ++D
Sbjct: 223 LHFKHLFAAAQQAGWTQRQNKEDVKLTHAPFGLV-LGHDGT--KLSSRNGAFDYLEDLLD 279

Query: 416 -----------------------------------EVGSDSVRFMMLWRKNSELLDFDFC 440
                                               VG  +VR+  L ++      F   
Sbjct: 280 GAAAECSRQALASATTGVVASELKLTQEQVDAQNRVVGDAAVRYFELAQQRERNYKFIMS 339

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE------SEFDTS 494
            V    K N   Y+ YA AR + I R+A     D    L   ++  Q+       ++  S
Sbjct: 340 NVLNL-KGNTGVYLMYASARLQGILRKAGGSSWDAFLGLSSDSLAAQDVLAHASIDWHPS 398

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E  L + L+++   +        P+ L  YL+ +A  FHG + + R              
Sbjct: 399 ERALALLLSQFDDEVAATLAHLYPHYLCDYLFRVAGHFHGFYENCRVLQ---------DP 449

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               RL L  A  +++  GL ++GVE+ + M
Sbjct: 450 HQDSRLLLCAATDAVLRRGLQLVGVEAVDRM 480


>gi|194899366|ref|XP_001979231.1| GG14252 [Drosophila erecta]
 gi|190650934|gb|EDV48189.1| GG14252 [Drosophila erecta]
          Length = 572

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 112/535 (20%), Positives = 201/535 (37%), Gaps = 88/535 (16%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L P    + L     + +            + +E+ S N   P HVGH R  ++G+ L
Sbjct: 86  FQLQPQLFAEQLLQTKENAVH---PSPFAAEHIVVEYSSPNIAKPFHVGHLRSTIIGNVL 142

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A+L    GY  TR  Y+ D G Q   LAL V     Q L  +D ++       +Y  +V 
Sbjct: 143 ANLHQHLGYRTTRLNYLGDWGTQFGLLALGV-----QLLNVSDKEMQLSPIETLYKCYVA 197

Query: 211 KELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFI 260
              A +   E+           E+          Q   K   +DL      L +  D + 
Sbjct: 198 ANKAAEQRPEIAQQARHLFAALEEGTDTTMTKQWQQYRKYTIEDLSKVYNRLGVHFDSYE 257

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  + +     I+ ++D L   G +       P+    +   +D +++           
Sbjct: 258 WESQYSQ---QHIQGVLDKLRSAGLL------QPEHDGREVVVVDGRRI----------- 297

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
             P++KSDGS  Y A D+A    +  R  F  ++YV+ +  + +   L   +AA++++  
Sbjct: 298 --PVIKSDGSTLYLARDIAALLERLSRFQFSRLLYVVDNGQADHFNALFKTSAALNDR-- 353

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
               L  E ++  + G    MS R G  + L+ V+DE                       
Sbjct: 354 ----LSLEQLQHVKFGRIHGMSTRQGKAVFLKDVLDEARDIMREKRSCSPTTRQNYNLDD 409

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +G  +V   +L ++     +F + +   Q   +    +QY + R  S+ +    
Sbjct: 410 EHVCDILGVSAVLVNVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHSLLQN--- 465

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            F ++D D    +     +E   + L L+  LA + + I  +    E   L  YL+ L +
Sbjct: 466 -FSEVDLDDIKPDWKHFATEPADA-LDLLYALARFDQSIWQSKEQLEACVLVNYLFGLCN 523

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    R   RL   Q +  +  + RL L HA    +  G+ ++G+   ++M
Sbjct: 524 A------ASRALKRLPVKQESCLQKQLQRLLLFHAAKRTLRQGMQLLGLRPLDQM 572


>gi|311978065|ref|YP_003987185.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|82000078|sp|Q5UQ59|SYR_MIMIV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|55417274|gb|AAV50924.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204982|gb|ADO18783.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 600

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 121/600 (20%), Positives = 222/600 (37%), Gaps = 104/600 (17%)

Query: 44  HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-----------SVFIAGKGF---- 88
               N +  L+    LD   I   ++ ++K +   +           SV I GK      
Sbjct: 45  DYQFNKSTKLANDCNLDKEKIVNELITQLKSNSFFENISSVELEQNKSVKINGKKTNTVI 104

Query: 89  --INLYLSPSYLR-----KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
             I + L+ S L       +L   ++SG            K+ +++ S N    MH+GH 
Sbjct: 105 KQIMITLNISKLYLSNRINLLYKRILSGSSIYVPNTI-TKKIIVDYSSPNIAKEMHIGHL 163

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
           R  ++G+++  ++   G++V R  ++ D G Q   L    + +  Q      S+L   Y 
Sbjct: 164 RSTIIGESICRVLEMCGHDVYRINHVGDWGTQFGMLI--AYIKNNQIESYTISELMNIYK 221

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPI-VKDYSVQAMMKIIRDDLKALNIQHDIFI 260
               L     +  ++   E ++        I +     +  M    +    L I + I  
Sbjct: 222 ESRKLFESSIDFKNQSRLETVSLQNGNIESITIWQKIHKISMNSFHEIYSLLGINNLITK 281

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  +       + +++++L     +                + D K +       G   
Sbjct: 282 GESFYQ----DQMTELVNSLTSDNKI--------------TVENDMKLMFVE----GISK 319

Query: 321 DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
              L KSDG +TY  +DL   K + +    D++IYV+ S    +  ++  +A  +   K 
Sbjct: 320 PFILQKSDGGFTYDTSDLTALKYRLFIEKADHIIYVVDSSQQEHFSQMFQIAEKLDWIKN 379

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---------------------- 417
           Q    +   + L  DG   K+  R+G+ I L+ V+D V                      
Sbjct: 380 QQLQHIGFGLVLGSDG--SKLKTRSGETIKLQDVIDNVVSHASNITRELIKQKNLDWNDD 437

Query: 418 ---------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
                      + +++  L         FD  K+   SK N   Y+ Y  ARC+SI R+ 
Sbjct: 438 DILTISKKIAINCIKYSDLNNPRLNNYKFDINKMLN-SKGNTAVYLMYGLARCKSILRKV 496

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
            +        +   ++I +    + +   L++H+ +Y  VI+       P+ L  YLYDL
Sbjct: 497 PNNT------VLNGDIIIE----NENSRNLLLHVLKYVEVIDQTVETMCPHYLCIYLYDL 546

Query: 529 ASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                  ++  R    +N  L    ANN       L++V+ V  II+    +IG+E   +
Sbjct: 547 IGSLTKFYTTNRCLEYDNDNLIGYNANN-------LRIVNMVKIIISKIFELIGLEEIEQ 599


>gi|242020388|ref|XP_002430637.1| predicted protein [Pediculus humanus corporis]
 gi|212515809|gb|EEB17899.1| predicted protein [Pediculus humanus corporis]
          Length = 569

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 104/533 (19%), Positives = 192/533 (36%), Gaps = 92/533 (17%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L      +     V+       N    G KV +E+ S N   P HVGH R  ++G++
Sbjct: 92  NIKLD----TRQFVKDVLESDPISLNFEPIGKKVIVEYSSPNIAKPFHVGHLRSTIIGNS 147

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-- 207
           +A++    G  V +  Y+ D G Q   + L V   ++    ++    P       Y+K  
Sbjct: 148 IANIKKKLGNNVFKLNYLGDWGTQFGIIQLGV--EHENYTIDDIKKDPINLLFKAYVKGN 205

Query: 208 ------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                     E A K    LL   +EK + +   Y +   ++ +    K L ++ D F  
Sbjct: 206 QLSKLDQDAYEKAKKNF-YLLERQDEKLIQLWDKYRMWT-LEELNATYKRLGVEFDSFSW 263

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E D+ R       +++  L  +G +                         +   V DD  
Sbjct: 264 ESDYRRSHAD---NVLKLLEEKGILSTDEFQ-------------------KKVAVIDDKV 301

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
            PL+KSD +  Y   DL     +     FD M YV+ +  + +   L  +   +   K +
Sbjct: 302 IPLIKSDNTTLYICRDLMAVLDRISTHNFDEMYYVVDNGQAEHFTNLFKLCEKLEISKNK 361

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
           I       +R  + G    M  R G+ I L+ V+DE                        
Sbjct: 362 I-------LRQIKFGKINGMKTRKGNVIFLKDVIDEARERVLAKQQSTKTTKTSADDRET 414

Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI-FRQAKDIF 472
              +G  +V    L R  ++     +  + + + +  VF +QY + R  ++     K + 
Sbjct: 415 ADVLGVSAVIINDLKRSRTKDYAAKWEDMLQMTSDTGVF-LQYCHCRLCNLSLECGKTMA 473

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D               +   + LI  +A Y  ++  +    +P +L  YL+ L    
Sbjct: 474 SYCDPQALK----------EIEAINLIKQIANYESILIKSNETLQPKELVSYLFALCRAT 523

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +G         +   V++++      RL L     S++  G+ ++G++   +M
Sbjct: 524 NG-------ALKNLNVKSSDDHTGSQRLLLFEKTRSVLEDGMKLLGLKPLRKM 569


>gi|302348141|ref|YP_003815779.1| Arginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328553|gb|ADL18748.1| Arginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 633

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 127/645 (19%), Positives = 248/645 (38%), Gaps = 108/645 (16%)

Query: 22  IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81
           + V++ +  R ++E  ++  +G  S  +          DP  +A+++ +R+  D ++  V
Sbjct: 16  LGVDQLVAFRDLMEPVKE-EYGDSSFPSIR-----YSKDPDEVAKILASRLASDYNIHYV 69

Query: 82  FIAG-KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
            +   KGF NL      L K +     +G E       +  K+ +E  SANP  P+H+GH
Sbjct: 70  DVKNLKGFTNLTFRCGDLVKAVVEWAKNGEELEVPKTSRPLKIVVEHTSANPIHPLHIGH 129

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV------------------- 181
            R A +GD+LA L+   G+ V   +YI+D G Q++  AL V                   
Sbjct: 130 TRNACIGDSLARLLKSRGHSVVTRFYIDDVGRQVSIAALGVKLLGIDVLKESQRLSIKPD 189

Query: 182 ---------------FWRYQQALYNNDSDL------------PEGYYPGVYLKHVGKELA 214
                              ++A  + +++             P  ++  +Y      E  
Sbjct: 190 SLVGWIYAVTSTTIDLLNAKKAGNSEEAEKLASTLARLKSQDPGNFFDKLYTALSSLENP 249

Query: 215 DKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           D   ++L N  E+  +    +    VQA+++  +  L+ L +  D +  E D        
Sbjct: 250 DAAVADLNNRYEKGLEPEKTLIRSMVQAVLEGFKQSLEILGVSFDFWDWESDLV--WSGL 307

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRP---LLK 326
           +  +++    +G  Y        +    +    ++   +    S  +      P   LL+
Sbjct: 308 VGRLVEE--AKGSRYFIKYKDADAIDVPQIISEEIQHDKEALSSIRLPKGFSLPPLILLR 365

Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           SDG+  Y   DLAY   K+ +   D +I V+G+D      +L      +  ++  +N++ 
Sbjct: 366 SDGTTLYTTRDLAYSILKFSQANADKVINVIGADQRLPQLQLRVALYGLGHRREALNLIH 425

Query: 386 C--ELVRLYRDGMPIK-------------MSKRAGDFITLRH----------VVDEVGSD 420
              E+VRL    M  +             +S RA   +T R+          +   +   
Sbjct: 426 YDYEIVRLTTGSMHGRRGEYVTLDSLLTELSTRALKEVTERNPSMSKEEAMVIARSISVG 485

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++R+ M+    S+ L F   K     +E+   Y+QY Y R  +I  +       +D +  
Sbjct: 486 AIRYFMVHMSASKPLTFSVDKAMNL-RESSGPYLQYTYVRAVNILEKHG----KVDLNSV 540

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             +   +         +L+V   + P VI  A     P  L  +L DLA  F+  +    
Sbjct: 541 DPDKCTEPR------RRLLVKALKTPLVIAKAADDLAPEDLVSHLADLADSFNTWYE--- 591

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +   ++  +     ++  +V  V   +  G++++G+ +   M
Sbjct: 592 ---QDSVIREPDVGAKELKALIVDIVRQSLGIGMSVLGIPTLRRM 633


>gi|28571570|ref|NP_649745.3| CG10092 [Drosophila melanogaster]
 gi|19528429|gb|AAL90329.1| RE18459p [Drosophila melanogaster]
 gi|28381174|gb|AAF54156.2| CG10092 [Drosophila melanogaster]
 gi|220948032|gb|ACL86559.1| CG10092-PA [synthetic construct]
          Length = 594

 Score =  253 bits (647), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 106/531 (19%), Positives = 195/531 (36%), Gaps = 80/531 (15%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             L P    + L       +            + +E+ S N   P HVGH R  ++G+ L
Sbjct: 108 FQLQPQVFVEQLLQTKEIALH---PSPFAAEHIVVEYSSPNIAKPFHVGHLRSTIIGNVL 164

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLK 207
           A+L    GY  TR  Y+ D G Q   L L V       ++   +    L + Y       
Sbjct: 165 ANLHEHLGYRTTRLNYLGDWGTQFGLLVLGVQLLNVSDKEMQLSPIETLYKSYVAANKAA 224

Query: 208 HVGKELADKYSSELLNFP---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               E+A +            ++      + Y    +  + +     L +  D +  E  
Sbjct: 225 EQRPEIAQQARDLFAALEGGTDKSMAKKWQQYRNYTIEDLSKV-YNRLGVHFDSYEWESQ 283

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           + +     I+D++D L   G +       P+    +   +D +++             P+
Sbjct: 284 YSQ---QQIQDVLDKLRSAGLL------QPEHDGREIVVVDGRRI-------------PV 321

Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           +KS+GS  Y A D+A    +  R  F  ++YV+ +  + +   L    AA+ ++      
Sbjct: 322 IKSNGSTLYLARDIAALLERLSRFQFSRLLYVVDNGQADHFNALFKTTAALDDR------ 375

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416
           L  E ++  + G    MS R G  I L+ V+DE                           
Sbjct: 376 LSLEQLQHVKFGRIYGMSTRQGKAIFLKDVLDEARDIMREKRNISATTRENYNLDDEHVC 435

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             +G  +V   +L ++     +F + +   Q   +    +QY + R  S+     D F D
Sbjct: 436 DILGVSAVLVNVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHSLL----DNFRD 490

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           +D D    +     +E   + L L+  LA + + +  +    E   L  YL+ L +    
Sbjct: 491 VDLDDIKPDWKHFSTEPADA-LDLLYALARFDQSVWQSKEQLEACVLVNYLFGLCNA--- 546

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +   RL   Q ++ +  + RL L HA    +  G+ ++G+   N+M
Sbjct: 547 ---TSQALKRLPVKQESSLEKQLQRLLLFHAAKKTLRHGMELLGLRPLNQM 594


>gi|269860527|ref|XP_002649984.1| arginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066603|gb|EED44079.1| arginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 559

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/520 (18%), Positives = 197/520 (37%), Gaps = 75/520 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              Y+++IL++++    ++G   +GKG K+ +++ S N     HVGH R  ++G+ +  L
Sbjct: 87  KKKYVKEILTTVLTKDEKFGSVDVGKGEKIVLDYSSPNIAKIFHVGHFRTTILGNFIKHL 146

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY-YPGVYLKHVGKE 212
           + F+G+E     Y+ D G Q   + L       +    +D+ +   + Y  +       +
Sbjct: 147 LKFNGFEPVSINYLGDWGKQFGLVLLGYEKFGDKKKLQDDALMHLFHVYVEINKHKEFHQ 206

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
            A      +      ++L   + +   ++ K  +   K LN++ D++  E  +++     
Sbjct: 207 EARDIFKAMEEGSNPEYLKQWQLFRDISIEKY-KTLYKKLNVEFDVYSGESLYNQKGKKI 265

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I                         ++  + D  + L             + K+DG+  
Sbjct: 266 IEKC-------------TSIVTDEDGSKYINTDYGKAL-------------VQKNDGTTL 299

Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-VSEKKAQINVLLCELVR 390
           Y   D+A    + E      +IY++ S+   + ++L  +A   +   K +   +   LV+
Sbjct: 300 YITRDIAAIIDRMETYNPKQIIYIVSSEQDQHFQQLFYIAEHILKYPKEKFLHVNYGLVK 359

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------- 429
                    MS R G    +  V+D   S    F+                         
Sbjct: 360 --------GMSTREGTVHFIDDVIDLATSVFREFVDEKENVLDKEKTALILAISFLIVND 411

Query: 430 ---KNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
              K  +   FD   K   Q  +     +QY + R   I  Q  +I  D + D    N++
Sbjct: 412 FTAKRIKGYTFDIKKKATTQKGQALGPTLQYTHCRLCGIEEQNAEIVID-NIDKLNFNLV 470

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 D +   L+  L  + +V E   +  EP ++ FYL DL +V +   +  R     
Sbjct: 471 SN----DDTVANLMYKLLWFEQVNEQTLLDYEPSRVVFYLQDLCNVINSIINILR----- 521

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             V+  + ++  +RL +  A   ++ +GL I+G+    +M
Sbjct: 522 --VKDTDTEIAQIRLAVFKAAKIVLRNGLKILGLTVLEKM 559


>gi|320106629|ref|YP_004182219.1| arginine--tRNA ligase [Terriglobus saanensis SP1PR4]
 gi|319925150|gb|ADV82225.1| Arginine--tRNA ligase [Terriglobus saanensis SP1PR4]
          Length = 661

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 124/683 (18%), Positives = 241/683 (35%), Gaps = 127/683 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + ++ +  L  +   ++ +  + L +I  E+P     G ++   A  L++ L   P  IA
Sbjct: 2   YRTQQQKILTHLVTVLETKYGVTLAQIAAEQPPKTELGEVALPVAFELAKRLKKAPRVIA 61

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           + +   ++    + SV IAG G++NL    + L       V +        +G      +
Sbjct: 62  QELADEMRGVEGIASVDIAGAGYLNLKFDRASL-------VRAMAVGQHADVGGLGFRLV 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAF----SGYEVTREYYINDAGAQINTLALSV 181
           E  S NP    HVGH R A++GDT   L+      +GY V  + YI++ G Q+  + + +
Sbjct: 115 EHTSINPNKAAHVGHLRNAILGDTFQRLLRKDDFKNGYGVGVQNYIDNTGVQVADVVVGL 174

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------------- 227
                ++L +  S L +    G  + +   +L  + S      P +              
Sbjct: 175 THLEGKSLADVRSLLIDLKAKGQRIDYYLWDLYARVSRWYTEDPADIGARKELRLATLHL 234

Query: 228 -----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                    I+ D    A+++   + ++ L+I++D    E +            +  +  
Sbjct: 235 IEEGGNDTAIIADIVATAVIERHLETMQRLDIEYDFLPRESEILHLHFWDAARAL--MIE 292

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G +YE      + K      M R       T   DD  + +++S+G+ TY   D+AY  
Sbjct: 293 KGVLYE----ETEGKNKGCWVMRRPGT--EQTEGTDDDAKVIVRSNGTVTYVGKDIAYHL 346

Query: 343 CKYER----------------------------------GFDNMIYVMGSDHSGYVKRLE 368
            K+                                      D +  V+ S  +     + 
Sbjct: 347 WKFGLLPGKDFGYAKFHEYPTHTCWISTVHGENPHPTFGKADWIYNVIDSRQNDPQANVM 406

Query: 369 AVAAAVSEKKA--QINVLLCELVRLY---------------RDGMPIKMSKRAGDFITLR 411
                +  + A  +   L   +V L                R    +++S R G  +   
Sbjct: 407 EALRGMGYEDAANRYTHLNYAMVALTPRCAIDLGYEVSEEDRAKPYLEVSGRKGFGVKAD 466

Query: 412 HVVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            ++D                           ++   ++R+ ML    + ++ FD      
Sbjct: 467 DLLDRLIEAAKAEVDKRHPDRDPVERETAATQIAVGALRYFMLKFTRNTVIAFDLRDALS 526

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHL 502
              E    YVQYA  R  +I R+A  +  D   D+     +  + + D   S  ++ +  
Sbjct: 527 FEGE-TGPYVQYAIVRAGNILRKAG-VEQDASLDVLADVDVAAQIDGDENNSVWEIWLMA 584

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           +    VIE A +A EP  LA Y + LA  F+  +   +       +   +     + L  
Sbjct: 585 SRLTTVIEAAIVAAEPALLARYAFQLAQAFNNFYHRHQ------VLSETDLARKTVLLAT 638

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
                  +   L  +G+++P+ M
Sbjct: 639 AAVARREMIRALRFMGMDAPSFM 661


>gi|227827629|ref|YP_002829409.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584833|ref|YP_002843335.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227459425|gb|ACP38111.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019883|gb|ACP55290.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 625

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 130/659 (19%), Positives = 254/659 (38%), Gaps = 114/659 (17%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D   R K  L E +  ++ + ++ + +  I  P     G LS    + L   +  +    
Sbjct: 2   DIIGRAKKELAEYVAAQLGISEEEVFK-NITYPPREELGDLS----LALPSLIKRNINEK 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+L+         ++ + +AG  ++N  L+   L   + S +     YG   I K  ++ 
Sbjct: 57  AKLLQEY--KGELIERIEVAG-IYLNARLNLRNLFVSIFSKLDD--SYGLEKIEKPKRIV 111

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G Q+  L       
Sbjct: 112 VEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTGRQVAVLIYGLKLL 171

Query: 179 -------------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                    L +    ++    ++S+  E       L  +  +L
Sbjct: 172 GFPDPEPNVKKDLWLGIIYAMTNVILEIRKLREELKKLSESEYREKVRELDELIVIANDL 231

Query: 214 -------ADKYSSEL--LNFPEEKWLPIVKDYS-------------VQAMMKIIRDDLKA 251
                   DK +  +     PE++   I+K Y              +   ++   + L  
Sbjct: 232 RNRNEVLFDKLADAINAKEEPEKEIGEIIKKYEEGNDELKGIIRKYISYALEGFSETLSK 291

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM---DRKQ 308
           LNI+ D F  E D      + + +++  L     +      P K       D    D  +
Sbjct: 292 LNIRFDNFDYESDL--LWENMVNEVLKAL-----LSSSAKIPYKGVIALDLDSFLGDEAR 344

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
              R           L++SDG+  Y   D+AY   K+ +   D +I V+  +      +L
Sbjct: 345 SKLRIPKGLKIPPLVLMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQYIPQIQL 404

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------- 413
                 +   +   N+L      +   G  ++MS R G  IT+  +              
Sbjct: 405 RGALELLGYSRFAENLLHYSYGMVNIQG--LRMSGRLGKIITIDEIYEKLDNIVRNKLKE 462

Query: 414 -------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                  +D++ + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  
Sbjct: 463 KGGNMENIDDIANAALRYAILSVSANKPLSFDLNRITSF-EQNSGPYLQYTYARAANILA 521

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++ +       D          S+    +  +++ +A++P V +NA        L  +L 
Sbjct: 522 KSTENLSMDKVDF---------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLR 572

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+ +F+  +   R       +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 573 ELSDIFNSWYDKER------VLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|218295699|ref|ZP_03496495.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243858|gb|EED10385.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 592

 Score =  250 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 126/628 (20%), Positives = 240/628 (38%), Gaps = 90/628 (14%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           ++  L+E       E  +  R+ + +      G         L++ L   P TIAE + +
Sbjct: 2   VRRALEEAIHAALKEMGLDLRLKVAKAPKDKPGDYGVPL-FALAKELRKPPQTIAEELKS 60

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           R+++ P V+   I   G++N  L           ++   +        +   V IE  S 
Sbjct: 61  RLELPPFVEEA-IPVGGYLNFRLRTE-------DLLEEALRPKGPFPKREGLVLIEHTSV 112

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           NP   +HVGH R  V+GD+LA ++ ++G EV    YI+D G Q    A ++F      L 
Sbjct: 113 NPNKELHVGHLRNIVLGDSLARILDYAGREVLVLNYIDDTGRQ---AAETLFALRHYGLT 169

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            +  +  + +    Y++       +K    +           +++  V  ++      + 
Sbjct: 170 WDGKEKYDHFAGRAYVRLHQDPEYEKLQPAIEEVLHALEQGELREE-VNRILLAQMATMH 228

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           AL   +D+ + E D  R     ++  +  L +  +V+     P + K      MD    +
Sbjct: 229 ALAAHYDLLVWESDIVR--AGLLKKALAILEQSPHVFR----PTEGKYAGALVMDASPFI 282

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-------------------------- 344
                  +D    L++S G+ TY+A D+A+   K                          
Sbjct: 283 ----PGLEDPYFVLVRSGGAATYYAKDIAFQFWKMGLLEGLPFRPYENPYYPHLRTSAPE 338

Query: 345 ---YERGFDNMIYVMGSDHSGY----------------VKRLEAVA--------AAVSEK 377
              Y       I V+    S                   +R   +A          +S +
Sbjct: 339 GEPYTPRAQETINVIDVRQSHPQALVRAALALAGRPDLAQRAFHLAYETVLLEGKQMSGR 398

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K  ++V + E++   R      +S++  D          V   ++RF M   +  + +DF
Sbjct: 399 KG-LSVSVDEVLEEARRRALAVISEKNPDHPDKEEAARMVALGAIRFAMSKTEPRKQIDF 457

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            + +     + +   YVQYA+AR  +I R+A +  P            P  ++    E +
Sbjct: 458 RYQEALSF-EGDTGPYVQYAHARAHAILRKAGEWGP------------PDPAQATPYERE 504

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L + L ++   +  A   + P+ LA YL DLA+ ++ +++   E      V      L  
Sbjct: 505 LALALLDFEEAVLEAAEEKSPHVLAQYLLDLAAAWNAYYNAKEEGRPATPVLTAPEGLRE 564

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585
           +RL+LV ++   + +GL ++G+ +P  M
Sbjct: 565 LRLELVRSLQETLKTGLGLLGIPAPEVM 592


>gi|332797060|ref|YP_004458560.1| arginyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694795|gb|AEE94262.1| arginyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 623

 Score =  250 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 142/661 (21%), Positives = 243/661 (36%), Gaps = 114/661 (17%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           MY  A     L NYL  +    K  +K+L+   IE P       L    A+ L       
Sbjct: 1   MYALAKAKDELANYLSNVLNVDK--EKVLNS--IEYPTKEQIADL----ALPLPSVTKKF 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            + I      R+  +   D +      FIN  L+   L K + +       YG     + 
Sbjct: 53  DIEIKGEYNGRLIKEVWKDGL------FINARLNEKELLKEIFTNFSEN--YGIIKTERP 104

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            ++ +E  SANP  P+H+GH R A++GDTLA ++   G+EV   +Y+ND+G Q+  L   
Sbjct: 105 LRIVVEHTSANPIHPLHIGHLRNAILGDTLAKMLKARGHEVNVRFYVNDSGRQVALLIYG 164

Query: 181 V--------------------------------FWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +                                    +     NDS+  E       L  
Sbjct: 165 LSKLGYPDPPSEEKKDQWLGLIYAMTNVILEIKKINEELKSTTNDSEYKEKIARRDELLI 224

Query: 209 VGKELADKYSSELLNFPE----------------------EKWLPIVKDYSVQAMMKIIR 246
              EL+ +         +                      E+ +  +    V   ++  +
Sbjct: 225 SASELSKRNQEYFNKLSDQIMNDKDPEGEISKIIEKYEKGEEDIKKIVRKYVDFALEGFK 284

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + L+ L+I  D F  E D    +   +       +     Y+G                 
Sbjct: 285 ESLEKLHIMFDNFDYESDLLWNNDVKLVLDFALTSVAKINYKGTAALDLQNYIDDDIRKE 344

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365
                R     +     L++SDG+  Y   D+AY   K+ +   D +I V+    S    
Sbjct: 345 ----IRIPKGLEIPPLVLMRSDGTTLYTVRDIAYTIYKFRQFNADEVINVIAEQQSVPQM 400

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------ 419
           +L A    +  KK  IN++      +   GM  KMS R G +I+L  V D+V        
Sbjct: 401 QLRAALYILGWKKFAINLIHFSYGMVTLQGM--KMSGRLGKYISLDEVYDKVAEVVKAKI 458

Query: 420 ---------------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                           ++R+ ++    ++ + FD  +V    +EN   Y+QY YAR  +I
Sbjct: 459 EEKKGILENLNEIVNSAIRYAIISVSANKPVSFDVKRVANF-EENSGPYLQYTYARAYNI 517

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             ++ +   +LD      N +  E         L++ +A++P +  N+    +P  L  +
Sbjct: 518 LSKSTE---NLDISKIDENELKNEK------RTLLLMIAKFPDIFINSVDHLQPEVLTVF 568

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L  LA VF+  +   R       +Q  +    + RL +V  V +++ +GLN +G+ S   
Sbjct: 569 LRGLADVFNSWYDKER------VLQEPDESKRITRLFIVKGVETVLRNGLNTLGIASLTR 622

Query: 585 M 585
           M
Sbjct: 623 M 623


>gi|171186028|ref|YP_001794947.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935240|gb|ACB40501.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 635

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 141/663 (21%), Positives = 258/663 (38%), Gaps = 123/663 (18%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR--PLGLDPLT 63
           +F   +K   + +      E        +ER R   +G+ S       ++     +DP  
Sbjct: 13  EFERLVKEAAEALGIGEVPE--------VERSRR--YGYYS-------AKFHKYRVDPQR 55

Query: 64  IAELIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKG 120
           +       ++      + SV   G  ++N  L+   + +++   V   G  YG     + 
Sbjct: 56  L-REFTDGLRGRRLEYLASVSAEGL-YLNADLAVDKIAELVFKAVSEMGERYGYTDECRL 113

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  +E  SANP  P+H+GH R A++GD+LA L+ F G  V   +Y++D G Q+   A+ 
Sbjct: 114 GRFLVEHTSANPIHPLHIGHGRNAILGDSLARLLRFCGNSVETHFYVDDCGVQVMYAAIG 173

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVY-----------LKHVGKELADKYSSELLNFPEEKW 229
                  A        P+     +Y           LK     + D+     +    ++W
Sbjct: 174 YNAVRDLAGERIRRVKPDVVVGAIYSATNAVAEIGRLKRELAAVQDEERRREIISEIDEW 233

Query: 230 LPIVKDYSVQA--MMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIID------ 278
           + ++K        ++  + + L   ++  +       +  GDP     +R+++D      
Sbjct: 234 VGVLKRIMDAEGDIVNRLAESLGGRDLVAEAAELNRRYEAGDPEARRAVREVVDLVLKGQ 293

Query: 279 --NLARQG-----YVYEGILPPPKSKTT-----------QKCDMDRKQLLFRSTMVGDDV 320
              L+R G     + YE  +     +             Q  +     ++FR+    +D 
Sbjct: 294 RETLSRLGIEIDRWDYESEISVWSGEAARIVAELQRRWPQYVESRGGAVVFRADKFVEDF 353

Query: 321 -------------DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
                           L +SDG+  Y   D+AY   +  + FD +I V+ ++ +     +
Sbjct: 354 KLWDVLDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQTRQEFDRVIRVISTEQTHEQAHV 413

Query: 368 EAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
             +  A+   E+  ++     E+V L       KMS R G +I L  ++DE         
Sbjct: 414 RIILYALGFQEEAKRLMHYAYEMVNLP----GAKMSARRGQYIALDEILDEAAERSAALV 469

Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         VG  SVR+  L     + ++F +  V    ++N   ++QY Y R  
Sbjct: 470 KEKNPEVAGVIAERVGVGSVRYAFLSTGPRKPIEFKWETVLNM-RQNSGSFLQYTYVRAY 528

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI  +A               VIP E      E +LI+ +AE+P V++ A  A  P  +A
Sbjct: 529 SILEKATGAN-------LAGVVIPGEIL--PEERELILKVAEWPGVVKTAVHALRPDYVA 579

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            +L  LA VF+ ++      P L+        L   RL LV+AV +++ +G  I+G+ + 
Sbjct: 580 EFLDGLALVFNSYYEK---APVLK----AEEPLRSFRLALVNAVKNVLAAGFYILGIPTL 632

Query: 583 NEM 585
            +M
Sbjct: 633 TKM 635


>gi|238619786|ref|YP_002914612.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238380856|gb|ACR41944.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323474679|gb|ADX85285.1| arginyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477413|gb|ADX82651.1| arginyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 625

 Score =  250 bits (639), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 130/659 (19%), Positives = 254/659 (38%), Gaps = 114/659 (17%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D   R K  L E +  ++ + ++ + +  I  P     G LS    + L   +  +    
Sbjct: 2   DIIGRAKKELAEYVAAQLGISEEEVFK-NITYPPREELGDLS----LALPSLIKGNINEK 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+L+         ++ + +AG  ++N  L+   L   + S +     YG   I K  ++ 
Sbjct: 57  AKLLQEY--KGELIERIEVAG-IYLNARLNLRNLFVSIFSKLDD--SYGLEKIEKPKRIV 111

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G Q+  L       
Sbjct: 112 VEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTGRQVAVLIYGLKLL 171

Query: 179 -------------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                    L +    ++    ++S+  E       L  +  +L
Sbjct: 172 GFPDPEPNVKKDLWLGIIYAMTNVILEIRKLREELKKLSESEYREKVRELDELIVIANDL 231

Query: 214 -------ADKYSSEL--LNFPEEKWLPIVKDYS-------------VQAMMKIIRDDLKA 251
                   DK +  +     PE++   I+K Y              +   ++   + L  
Sbjct: 232 RNRNEVLFDKLADAINAKEEPEKEIGEIIKKYEEGNDELKGIIRKYISYALEGFSETLSK 291

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM---DRKQ 308
           LNI+ D F  E D      + + +++  L     +      P K       D    D  +
Sbjct: 292 LNIRFDNFDYESDL--LWENMVNEVLKAL-----LSSSAKIPYKGVIALDLDSFLGDEAR 344

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
              R           L++SDG+  Y   D+AY   K+ +   D +I V+  +      +L
Sbjct: 345 SKLRIPKGLKIPPLVLMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQYIPQIQL 404

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------- 413
                 +   +   N+L      +   G  ++MS R G  IT+  +              
Sbjct: 405 RGALELLGYSRFAENLLHYSYGMVNIQG--LRMSGRLGKIITIDEIYEKLDNIVRNKLKE 462

Query: 414 -------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                  +D++ + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  
Sbjct: 463 KGGNMENIDDIANAALRYAILSVSANKPLSFDLNRITSF-EQNSGPYLQYTYARAANILA 521

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++ +       D          S+    +  +++ +A++P V +NA        L  +L 
Sbjct: 522 KSTENLSMDKVDF---------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLR 572

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+ +F+  +   R       +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 573 ELSDIFNSWYDKER------VLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|15897753|ref|NP_342358.1| arginyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|227830317|ref|YP_002832097.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579142|ref|YP_002837540.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284997739|ref|YP_003419506.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|23822202|sp|Q97ZN1|SYR_SULSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13814038|gb|AAK41148.1| Arginyl-tRNA synthetase (argS) [Sulfolobus solfataricus P2]
 gi|227456765|gb|ACP35452.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228009856|gb|ACP45618.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284445634|gb|ADB87136.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 625

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 129/659 (19%), Positives = 254/659 (38%), Gaps = 114/659 (17%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D   R K  L E +  ++ + ++ + +  I  P     G LS    + L   +  +    
Sbjct: 2   DIIGRAKKELAEYVAAQLGISEEEVFK-NITYPPREELGDLS----LALPSLIKGNINEK 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+L+         ++ + +AG  ++N  L+   +   + S +     YG   I K  ++ 
Sbjct: 57  AKLLQEY--KGELIERIEVAG-IYLNARLNLRNIFVSIFSKLDD--SYGLEKIEKPKRIV 111

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G Q+  L       
Sbjct: 112 VEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTGRQVAVLIYGLKLL 171

Query: 179 -------------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                    L +    ++    ++S+  E       L  +  +L
Sbjct: 172 GFPDPEPNVKKDLWLGIIYAMTNVILEIRKLREELKKLSESEYREKVRELDELIVIANDL 231

Query: 214 -------ADKYSSEL--LNFPEEKWLPIVKDYS-------------VQAMMKIIRDDLKA 251
                   DK +  +     PE++   I+K Y              +   ++   + L  
Sbjct: 232 RNRNEVLFDKLADAINAKEEPEKEIGEIIKKYEEGNDELKGIIRKYISYALEGFSETLSK 291

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM---DRKQ 308
           LNI+ D F  E D      + + +++  L     +      P K       D    D  +
Sbjct: 292 LNIRFDNFDYESDL--LWENMVNEVLKAL-----LSSSAKIPYKGVIALDLDSFLGDEAR 344

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
              R           L++SDG+  Y   D+AY   K+ +   D +I V+  +      +L
Sbjct: 345 SKLRIPKGLKIPPLVLMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQYIPQIQL 404

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------- 413
                 +   +   N+L      +   G  ++MS R G  IT+  +              
Sbjct: 405 RGALELLGYSRFAENLLHYSYGMVNIQG--LRMSGRLGKIITIDEIYEKLDNIVRNKLKE 462

Query: 414 -------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                  +D++ + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  
Sbjct: 463 KGGNMENIDDIANAALRYAILSVSANKPLSFDLNRITSF-EQNSGPYLQYTYARAANILA 521

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++ +       D          S+    +  +++ +A++P V +NA        L  +L 
Sbjct: 522 KSTENLSMDKVDF---------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLR 572

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+ +F+  +   R       +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 573 ELSDIFNSWYDKER------VLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|229582117|ref|YP_002840516.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012833|gb|ACP48594.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 625

 Score =  249 bits (636), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 129/659 (19%), Positives = 253/659 (38%), Gaps = 114/659 (17%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D   R K  L E +  ++ + ++ + +  I  P     G LS    + L   +  +    
Sbjct: 2   DIIGRAKKELAEYVAAQLGISEEEVFK-NITYPPREELGDLS----LALPSLIKGNINEK 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A+L+         ++ + +AG  ++N  L+   +   + S +     YG   I K  ++ 
Sbjct: 57  AKLLQEY--KGELIERIEVAG-IYLNARLNLRNIFVSIFSKLDD--SYGLEKIEKPKRIV 111

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178
           +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G Q+  L       
Sbjct: 112 VEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTGRQVAVLIYGLKLL 171

Query: 179 -------------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                    L +    ++    ++S+  E       L  +  +L
Sbjct: 172 GFPDPEPNVKKDLWLGIIYAMTNVILEIRKLREELKKLSESEYREKVRELDELIVIANDL 231

Query: 214 -------ADKYSSEL--LNFPEEKWLPIVKDYS-------------VQAMMKIIRDDLKA 251
                   DK +  +     PE++   I+K Y              +   ++   + L  
Sbjct: 232 RNRNEVLFDKLADTINAKEEPEKEIGEIIKKYEEGNDELKGIIRKYISYALEGFSETLSK 291

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM---DRKQ 308
           LNI+ D F  E D        + +++  L     +      P K       D    D  +
Sbjct: 292 LNIRFDNFDYESDL--LWEKMVNEVLKAL-----LSSSAKIPYKGVIALDLDSFLGDEAR 344

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
              R           L++SDG+  Y   D+AY   K+ +   D +I V+  +      +L
Sbjct: 345 SKLRIPKGLKIPPLVLMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQYIPQIQL 404

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------- 413
                 +   +   N+L      +   G  ++MS R G  IT+  +              
Sbjct: 405 RGALELLGYSRFAENLLHYSYGMVNIQG--LRMSGRLGKIITIDEIYEKLDNIVRNKLKE 462

Query: 414 -------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                  +D++ + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  
Sbjct: 463 KGGNMENIDDIANAALRYAILSVSANKPLSFDLNRITSF-EQNSGPYLQYTYARAANILA 521

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++ +       D          S+    +  +++ +A++P V +NA        L  +L 
Sbjct: 522 KSTENLSMDKVDF---------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLR 572

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+ +F+  +   R       +Q  + +  M+RL +V  V+ ++ +GL+++G+ S   M
Sbjct: 573 ELSDIFNSWYDKER------VLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625


>gi|225874400|ref|YP_002755859.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225794344|gb|ACO34434.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 689

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 124/706 (17%), Positives = 232/706 (32%), Gaps = 138/706 (19%)

Query: 1   MYLFAD--FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58
           MYL        RL   L E+  ++         + +E+P +   G  +   A  L+R L 
Sbjct: 1   MYLTQQSLLRERLHARLLELYPQLD-PSTFAAILKVEQPPESKFGDYALPLAFELARALR 59

Query: 59  LDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
             P  IAE IVA + + P     +  +AG G+IN  L  +   +      +    Y +  
Sbjct: 60  KAPRKIAEEIVAALAVHPIPGFAAFEVAGAGYINARLDRAAFVRDFVKRRM----YWKQG 115

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +     + +E  S NP    HVGH R A++GDT   L+   G+ V  + YI++ G Q+  
Sbjct: 116 L---AYILVEHTSINPNKAAHVGHLRNAILGDTFVRLLEAQGFLVGVQNYIDNTGVQVAD 172

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-------- 228
           + +++       L    S +      G  +     +L  + S      PE+K        
Sbjct: 173 IVVALQHLEGLNLAAVQSLMQRLAAEGQRIDFYCWDLYARVSQWYEADPEQKTARRQLRL 232

Query: 229 -----------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                          + D    A+++   + +  L I++D    E +          +  
Sbjct: 233 DTLHAIEHGGNDSAAIGDLIATAVLRRHLETMLRLGIEYDFLPRESEILHLHFW--EEAF 290

Query: 278 DNLARQGYVY----------EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           + +  +G +Y            +  P  S+T +             +   D+  + +++S
Sbjct: 291 ELMKAKGVLYFETEGKNKGCWVMTRPGTSRTGEPLRATDDTSPATESAAPDEDAKVIVRS 350

Query: 328 DGSYTYFAADLAYFKCKY---ERGF----------------------------------- 349
           +G+ TY   D+AY   K+   E+ F                                   
Sbjct: 351 NGTVTYVGKDIAYHLWKFGLLEKDFKYKKFFQYPPSTKFEDGRECWISAVESSEFRPRFG 410

Query: 350 --DNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLY------------- 392
             + +  V+ +  S     +      +   +  A+      E+V L              
Sbjct: 411 KAEAIYNVIDARQSDPQANVIEALRGMGYTEQAARYTHFSYEMVALTPRCALDLGYQVPE 470

Query: 393 --RDGMPIKMSKRAGDFITLRHVVD---------------------------EVGSDSVR 423
                  I++S R G  +    ++D                           ++   ++R
Sbjct: 471 EDLTRPYIEVSGRKGFGVKADDLIDKLIDATQSEVASRHPELPEEEQAQTARQIAVGALR 530

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDL 479
           + ML    + ++ FDF        E    Y+QYA  R RSIFR+A     +    L    
Sbjct: 531 YFMLKYTRNTVIAFDFKDALSFEGE-TGPYLQYAAVRTRSIFRKADMTPDEALSALAALP 589

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
             R       E   +   + +   +   ++E      EP  LA + + LA  F   +   
Sbjct: 590 ADRIAPFLSGEDAEAIWAVWLRAGKTALLLEQCIQTAEPAYLAKHAFQLAQDFSNFYRRH 649

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   +   +     + L         +   L  +G+++P  M
Sbjct: 650 H------ILTEEDAAKKTLLLATAAVAQRELIRSLAWLGIDAPEVM 689


>gi|323308834|gb|EGA62071.1| Msr1p [Saccharomyces cerevisiae FostersO]
          Length = 530

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 104/488 (21%), Positives = 184/488 (37%), Gaps = 83/488 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +E       G L     + L +    DP+ +A      +     +  V   G  F+  +L
Sbjct: 70  LESTNSMDRGDL----LLPLPKIKVADPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFL 124

Query: 94  SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
              YL +  + +I++   +YG+       KV +EF S N   P H GH R  ++G  L++
Sbjct: 125 DQRYLIQSTVPNILLQKGKYGQKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSN 184

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    G+ VTR  Y+ D G Q   LA+  F RY           P  +   VY+K +  +
Sbjct: 185 LYEAMGWSVTRMNYLGDWGRQFGLLAVG-FKRYGDEKTLQKQ--PIQHLFDVYVK-INMD 240

Query: 213 LADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           LA +  +               + L   +E  + I K +   ++   I      LNI  D
Sbjct: 241 LAKEEINGNSKCGISGEARSFFKNLENGDENAIKIWKRFRSLSIHHYI-QTYSRLNINFD 299

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           IF  E    +     + + +D   +   V E                    L+   T   
Sbjct: 300 IFSGESQVSK---ESMNEALDIFRKNNLVKEI----------------DGALVIDLTQWS 340

Query: 318 DDVDRPLL-KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             + R ++ KSDG+  Y   D+ A  + K    FD M+YV+ S    Y+ +   +   ++
Sbjct: 341 KRLGRVVVQKSDGTTLYLRRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN 400

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
            + A+        ++    GM   MS R G+ + L  ++DE                   
Sbjct: 401 FEWAK-------DLQHINFGMVQGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQV 453

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  ++    +  K     +F++ ++    + +   Y+QY ++R RS+ R 
Sbjct: 454 DNPQRVADLIGVSAIIIQDMKSKRINNYEFNWNRMLSF-EGDTGPYLQYTHSRLRSLERT 512

Query: 468 AKDIFPDL 475
           + D   D+
Sbjct: 513 SSDFTTDM 520


>gi|329764907|ref|ZP_08256496.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138576|gb|EGG42823.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 516

 Score =  247 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 99/548 (18%), Positives = 196/548 (35%), Gaps = 115/548 (20%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K + + +E  S NP   +H+GH R  ++GDT+A ++  S Y+V    Y++D+G Q+  + 
Sbjct: 3   KNSSIVVEHTSVNPNKALHIGHIRNIIIGDTIARILKKSNYKVNVLNYVDDSGLQVADII 62

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPI 232
           +   +   +            +Y G  +     E  +      +    +L   E+     
Sbjct: 63  VGFTYFGFEQEPPAGKKF--DHYCGDDVYVKTTEKYEHDSSLEEIRKNVLKELEDGDSQT 120

Query: 233 --VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
               D   + +++   +      + +D    E    R        I + L     +    
Sbjct: 121 AQFADKITRRVLENQLETCWNFGVYYDCLNFESQIIR--SGLWSKIFEKLKEMSLI---- 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY----- 345
               + K      +  +          ++ D+ +++S+G+ TY A D+ Y   K      
Sbjct: 175 EFESEGKNANCWVIRGEN---------NEEDKVIVRSNGTATYIAKDIPYAAWKLGLLED 225

Query: 346 ----------------------------ERGF--DNMIYVMGSDHS----------GYVK 365
                                       ++ F  D +I V+ S  +             K
Sbjct: 226 PFNYQKYEKIQPDNRILWQTTLEDSDEQKQHFTADKVITVIDSRQARLQKIITTLMSKFK 285

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
                   +  +   ++    + + L  DG   +MS R G ++    V D          
Sbjct: 286 SAPDAYVHLGYESVTLSADTAQTLGLETDGKQAQMSGRKGLYVNADSVYDILKNKTIEET 345

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             V   ++R+ M+ +   +++ FD  K     + +   Y+QY +
Sbjct: 346 KKRHSEMDDSEIQKIAHIVSVGTLRYEMIKQDLDKIITFDLVKSLSL-EGDTASYIQYTH 404

Query: 459 ARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           AR   I  ++      D+DF L            D SEL L+  +  +  V+ NA     
Sbjct: 405 ARASRIIEKSGRSPSIDVDFSLLT----------DDSELGLVKTIGLFELVVLNAAQNLS 454

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P  +A Y +DLA  F+  + H      ++ +   ++KL   RL LV++    +   L ++
Sbjct: 455 PKVIARYCHDLAVSFNSFYEH------VKVIDLGDQKLENSRLCLVNSFKMTLEKSLGLL 508

Query: 578 GVESPNEM 585
           G+E+P++M
Sbjct: 509 GIEAPDKM 516


>gi|94969059|ref|YP_591107.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94551109|gb|ABF41033.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 647

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 113/676 (16%), Positives = 227/676 (33%), Gaps = 127/676 (18%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  +  +  I   ++ +  + L  +V++ P     G  +   +  L++ L   P  IA
Sbjct: 2   YRSLQQRLISAIQAFLRQKYDVHLPTLVVDAPPKVEMGEYALPFSFELAKRLRKAPRKIA 61

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E +   +      +   +AG G+IN  L        L        +     +    K+ +
Sbjct: 62  EEVATELPPIEGFEKPEVAGAGYINFRLKRGDAATAL-------AKGESTPVTHDGKILV 114

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E  S NP    H+GH R +++GDT   L+  +G  V  + YI++ G Q+  + +  F   
Sbjct: 115 EHTSINPNKAAHIGHLRNSILGDTFVRLLRAAGRTVDIQNYIDNTGVQVADVVVG-FTHI 173

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-----------KWLPIVK 234
           +       + L E      Y   +    +  Y     N                 L  + 
Sbjct: 174 ENKSKAEITALTEQPKFDYYCWDLYAHTSQWYEQAAENKKIRLEVLHAIEHGGNELSEIA 233

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +   +A+++   + +  L I++D    E +  R +   +    + L  +G +Y       
Sbjct: 234 EIISRAVLRRHLETMDRLGIEYDFLPRESEILRLNFWAL--AFEQLKEKGVLY--FETEG 289

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER------- 347
           K+K         ++   R     D+  + +++S+G+  Y   D+AY   K+         
Sbjct: 290 KNKGCWVMTRPGRE---RVDGQPDEDAKVIVRSNGTVGYVGKDIAYHLWKFGLLGRDFGY 346

Query: 348 -----------------------------GFDNMIYVMGSDHSGYVKRLEAVAAAVSE-- 376
                                        G   +  V+ +  S   + ++     +    
Sbjct: 347 KKFYLYPNGQQVWISCDPAEGESDHPHFGGVSEIYNVIDTRQSDPQETVKEAIRLLGYND 406

Query: 377 KKAQINVLLCELVRLY---------------RDGMPIKMSKRAGDFITLRHVVD------ 415
           K         E+V L                R    I++S R G  +    ++D      
Sbjct: 407 KADHYTHFSYEMVALTPRCAIDLGYDVSEDDRAKSYIEVSGRKGFGVKADDLIDKLIDAA 466

Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
                                ++   ++R+ ML    + ++ FDF +      E    Y 
Sbjct: 467 TKEVDSRHPELTESERREIGTQIAIGALRYFMLKYTKASVIAFDFKEALAFEGE-TGPYA 525

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAEYPRVIENAT 513
           QYA  R  +IFR+A         D    NV   +   +T+E  ++ +   +  +++E   
Sbjct: 526 QYAVVRATNIFRKAGI----APGDALAYNVDFTKHFAETAEIWEVWLMAGKTSQILELCI 581

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN-- 571
              EP   A + + LA +F+  +           +   +       L    A A+++   
Sbjct: 582 SQSEPAYAAKHAFQLAQLFNNFYHRHH------ILTEEDEGRKKFLL----ATAAVMRRE 631

Query: 572 --SGLNIIGVESPNEM 585
             + L  +G+  P  M
Sbjct: 632 LIAVLAAMGISVPPVM 647


>gi|225683425|gb|EEH21709.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 609

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 112/596 (18%), Positives = 215/596 (36%), Gaps = 97/596 (16%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IER +  AHG       +I++R L L   +I +L    +   P   SVFI      N  +
Sbjct: 61  IERTQVLAHGD----VVLIVAR-LRLKGDSIGQLFALPLISCPSSKSVFI--PIHFNETI 113

Query: 94  SPSYLRKILS-------SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
            P  +   +            +G+   +N      KV +EF S N     H GH R  ++
Sbjct: 114 LPRLILPYIFDRRHLYGQDTSTGLRGAKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTII 173

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           G  ++ L    G++V +  Y+ D G Q   LA+       + L+  +   P+ +   VY 
Sbjct: 174 GAYISYLYGNMGWDVLKINYLGDWGKQFGLLAVGWQKFGSEELFQKE---PQKHLLDVYA 230

Query: 207 K--------HVGKELADKYSSELLNFP------------------EEKWLPIVKDYSVQA 240
           K            + A +   +                       E + L + K +   +
Sbjct: 231 KINSLFNPEKEASKNARENGEDTSEIESKGIYAERNAFFKRMEDREPEALRLWKRFRDIS 290

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + + I      LNI  D +  E       P  +  +   L  +G +YE      +++   
Sbjct: 291 IERYIS-TYARLNIAFDEYSGESAVR---PETVEKVERILKEKG-IYE------ENQGLW 339

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSD-GSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358
             D  +             +D  ++++  G+ TY   D+A    + E+  FD MIY + +
Sbjct: 340 IIDFKKHGARV--------LDIAIVRNRGGTSTYLLRDIATVLEREEKYEFDKMIYFVAA 391

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           + + Y +R+      +   +      +   +     G    M+ + G    L  ++D+  
Sbjct: 392 EQNTYFQRVFKTVEILGYPE------IASKLVHINFGKVQGMTSQLGAVKLLGDILDK-- 443

Query: 419 SDSVRFM-MLWRKNSELLD--FDFCKVKEQSKENPV------FYVQYAYARCRSIFRQAK 469
              V +M  + R N        D   V +      V       ++QY++AR  SI R+AK
Sbjct: 444 --CVNYMHEVMRANETKYAQVEDPETVADVVGITAVMAQDMRPFLQYSHARLCSIMRKAK 501

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
               D+    F           +   + ++  +A +P ++  A    EP  +  YL+ L 
Sbjct: 502 LTADDVVKADFSF-------LKEPHAIDILSVVARFPDMVSQAYNTLEPTAILTYLFRLT 554

Query: 530 SVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                       +  ++ + A+   ++ +  L L      ++ +G+ ++G      
Sbjct: 555 RQASS------AHEVVKDLGASVGPEVMLAHLALCEGARQVLENGMRLLGFTPLER 604


>gi|159041586|ref|YP_001540838.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920421|gb|ABW01848.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 630

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 122/582 (20%), Positives = 213/582 (36%), Gaps = 108/582 (18%)

Query: 88  FINLYLSPS-----YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           FIN +L+ +     Y R +L S +  G +YG+    K   V +E  SANP  P+H+GHCR
Sbjct: 73  FINGFLNTNVNLINYSRLVLDSTIGLGPDYGKVPGVKRLNVIVEHTSANPLHPLHIGHCR 132

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY 201
             V+GD+L  L+ F G+ V+  +Y++D G Q+  LAL     R            P+   
Sbjct: 133 NMVLGDSLVRLLRFMGHNVSARFYLDDTGIQVMYLALGYSKVRELAKNRIESGQKPDHVM 192

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY------------------------- 236
             +Y          + S  L    EE++  ++K+                          
Sbjct: 193 WVIYSVTNAVAEVQRISKVLEGKSEEEYRELIKERDEWVGVIADWLSKDKELVNALVEAL 252

Query: 237 ------SVQAMMKIIRDD-----------------------LKALNIQHDIFISEDDFHR 267
                 +  A M  + +D                        K  N++ D +  E +   
Sbjct: 253 SSIDVNAEVARMAKMYEDGDEKVKGIVREAVNLVLKGFEETFKLFNVKFDSYDWESEIAV 312

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                 + II +L +    Y             K   + K L     +        L +S
Sbjct: 313 Y-SGLAKRIIMDLVKAAPKYVEFKDGVYVFRADKAAAELK-LWDELKLPKFIPPATLNRS 370

Query: 328 DGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           DG+  Y   D+AY          D ++ V+  + +    +L  +   +    ++I     
Sbjct: 371 DGTTLYLTRDVAYAVWCLTNCNPDVVVRVIAVEQTHPQAQLRIMLKLLGYDASRIVHYAY 430

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------VGSDSVR 423
           E+V L       KMS R G  +T+  ++D+                       V   ++R
Sbjct: 431 EMVNLGE----AKMSSRRGQAVTIDGLLDDAVKRVKAIASGRSGLNTDDVAYAVAVGAIR 486

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  +    S+ + FD+ +V +   +N   ++QY Y R  SI  +A       + D     
Sbjct: 487 YYFVSVSPSKQIVFDWGRVLDM-NQNSGPFIQYTYVRAYSILSKA-------NLDHIQYT 538

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
           V P        E  LI+ + E+P V+   +   +   L  ++  LA  F+  +       
Sbjct: 539 VPPT---LSQEEGDLILMIGEFPEVLLRVSEDLKLENLVSFMNRLALEFNTFYE------ 589

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   + A    L   RL LV AV  ++ + +NI+G+   + M
Sbjct: 590 KYPVLNAE-PGLREFRLALVKAVKIVLENSMNILGIPVLSRM 630


>gi|301608810|ref|XP_002933968.1| PREDICTED: LOW QUALITY PROTEIN: probable arginyl-tRNA synthetase,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 573

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 102/565 (18%), Positives = 195/565 (34%), Gaps = 98/565 (17%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-VSGIEYGRNLIG----K 119
           A+ +  ++  D  +  +  A    +   ++   L + +   +   G  YG N        
Sbjct: 63  AQQLAGKLVCDSVISDIGTARAS-VTFKINRDLLTRTVLQQISKDGSIYGLNTELFSGLS 121

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G K  +E+ S N     HVGH R  ++G+ +A+L    G EV R  Y+ D G Q   L  
Sbjct: 122 GRKTVVEYSSPNIAKKFHVGHLRSTIIGNFIANLKQAVGNEVIRINYLGDWGLQFGLLGA 181

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLK-------HVGKELADKYSSELLNFPEEKW 229
                   + + ++ +L   P  +   VY+K           +L+ +     L   +   
Sbjct: 182 GF------SKFGSEEELVVNPLQHLFEVYVKVNTAAEEDKDIKLSAQEFLRRLEGGDPHA 235

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L +   +   ++ +  +   K L    D +  E  +        ++++  L   G + + 
Sbjct: 236 LSLWMHFRDLSIQEYAKV-YKRLGAHFDDYSGESFYKE----KSQEVLKQLESNGLLQKT 290

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348
                              +  ++            K     +    D+A    + ER  
Sbjct: 291 EXGLF--------------IWLKTFANVKTYTTCFQK---CLSLIFRDVAAALDRLERYS 333

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDF 407
           FD MIYV       + ++L  +   + + +A +   +   LV+         M  R G+ 
Sbjct: 334 FDEMIYVTDKSQKNHFQQLFKILKILGKDQADRFQHVPFGLVK--------GMKTRRGEV 385

Query: 408 ITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
           + L  V+DE                           +G  ++       +      FD+ 
Sbjct: 386 VFLEDVLDEARSRMLQNMAASGTSKQLEDPSDTAEKIGIAALIVQDFKGQLLSDYHFDWD 445

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +   QS  +   ++QY +AR  S+  QA     D D        I   S  +   +  + 
Sbjct: 446 QAL-QSTGDTGVFLQYTHARLHSL--QALWCSRDTD-------DIDIASLREPCVIATLQ 495

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL  Y  VI       +P  L  YL  L  + +          R   V+ ++ +    RL
Sbjct: 496 HLLRYDEVIYKCLEDLQPRYLVTYLMSLGHLAN-------VAHRALHVKRSSSEAAHARL 548

Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585
              + V  +++SG+ ++G+   N M
Sbjct: 549 FFFNNVRMVLSSGMKLLGISPVNNM 573


>gi|323651380|gb|ADX97536.1| arginyl-tRNA synthetase [Terra1 virus]
          Length = 438

 Score =  245 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 184/480 (38%), Gaps = 74/480 (15%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MH+GH R  ++G++L  L  + G +V R  +I D G Q   L    + R       + ++
Sbjct: 1   MHIGHLRSTIIGESLCRLYEYCGSKVHRVNHIGDWGTQFGMLI--AYIRKFDVTSRDLTN 58

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALN 253
           + E Y     L     E   +   E +      E  L I K+    +++    +    L 
Sbjct: 59  ILEVYRSARKLFESDTEFQKQSLIETVRLQNGFEDNLAIWKEIREISLIS-FNNIYHELG 117

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
              +I I E  +       I D+ +N+  +                +   +D        
Sbjct: 118 THAEI-IGESFYQSRMIDLINDLENNIKNEN-------------GMKVIFIDE------- 156

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                ++   L+KSDG +TY  +DLA  K ++ E+  D +IYV+ S  S + + +  +A 
Sbjct: 157 ----FEIPLILVKSDGGFTYDTSDLAAIKYRFMEQKVDRVIYVVDSGQSQHFQMIFKLAN 212

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV---------- 422
            +S  K +    +   V L  +G   ++  R+G+ + LR V+ +V   ++          
Sbjct: 213 QLSWCKNEQCYHIGFGVILGNNGK--RLKTRSGETVLLRDVLQQVQDRAILVTKSLRQND 270

Query: 423 ------------------RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                             ++  L         FD  K+   +K N   Y+ Y  ARC  I
Sbjct: 271 TLEHDISKISKIIANNCIKYSDLNNPRENNYRFDVDKMTN-TKGNTAVYLMYTLARCHGI 329

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  ++   LD D+            D     L + L +Y   IE +     P+ +  Y
Sbjct: 330 LRKISNLSVILDGDI---------EINDADTRCLAILLLKYVEFIEKSIKEHAPHYICNY 380

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY+L+      +S+ R    L         +   R++L+H    I++    +IG+ES  +
Sbjct: 381 LYELSVQITKFYSNNRC---LEIENGEIIYVYHNRIRLIHLAIIIMSKMFELIGLESVEQ 437


>gi|70607149|ref|YP_256019.1| arginyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363443|sp|Q4J904|SYR_SULAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|68567797|gb|AAY80726.1| arginyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 618

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 126/650 (19%), Positives = 245/650 (37%), Gaps = 113/650 (17%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
           +K    EI        K +    +E P     G +S          L L+       +  
Sbjct: 7   VKEEFCEIVANGLGISKDVIFKTLEYPPREELGDISLPLP-----SLKLNVR---TEVT- 57

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
                  +  V   G  ++N ++    L K+L + +    +YG        ++ +E  SA
Sbjct: 58  -FSHGKLIKEVRKTG-IYVNAFVDEKELFKLLFTEMQD--DYGVEKTENPKRIVVEHTSA 113

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL------------- 177
           NP  P+H+GH R +++GDT++ ++   G++V R +Y+NDAG Q+  L             
Sbjct: 114 NPIHPLHIGHLRNSILGDTISRMLKIRGHDVNRRFYVNDAGRQVAILTLGYILLGEPEPS 173

Query: 178 ----------------ALSVFWRYQQALYNNDSDLPEGYYPGVY--------LKHVGKEL 213
                            + +    ++   + D D  +     +         L+    E 
Sbjct: 174 PKVDHWFGLIYSITNVIIEIRELKEELKKDLDPDTYKDKINRLDELVATAQSLRERNPEF 233

Query: 214 ADKYSSELLNFP--EEKWLPIVKDYS--------------VQAMMKIIRDDLKALNIQHD 257
            DK +  + + P  E +   I+K Y               V   +   R+ L  L I  D
Sbjct: 234 FDKLADAINSIPDVESEIQKIIKSYEKGDDPKIKQIVRKIVNLNLDGFRESLDKLEISFD 293

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           ++  E +        + +I+    +    Y+G          +K      + +       
Sbjct: 294 VYDYESEL--LWSGMVDEILSKAFQIAKDYKGTKALELEDINEKI-----KEILNIPKGL 346

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 L +SDG+  Y   D+AY   K+ +   D +I V+    S    +L A    +  
Sbjct: 347 KLPPLVLTRSDGTSLYTTRDIAYTVKKFSDFKADTVINVIAEQQSIPQMQLRASLYLLGY 406

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS----------------- 419
           ++   N++      +   GM  +MS R G FI+L  V+++V                   
Sbjct: 407 ERLAQNLVHYSYGMVNLQGM--RMSGRLGRFISLDDVIEKVSEVAKKKIEEKSGDITNLR 464

Query: 420 ----DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
                ++R+ +L   +++ + F+   + +  ++N   Y+QY YAR  +I  + +D     
Sbjct: 465 DIVNSAIRYAILSVASNKPVTFNINNIVDF-EQNSGPYLQYTYARAYNILAKNQDEIKLT 523

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D DL         S+    + +L++ +A +P     A     P  L  +L   A VF+  
Sbjct: 524 DADL---------SDLIGDKRRLLLLIARFPETFNKAIDELRPEDLIDFLRRTADVFNRW 574

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           ++  R       +Q  + +  + RL +V  +  ++ +GLN +G++  ++M
Sbjct: 575 YNFER------VLQEPDYRKRITRLFIVKGIERVLYNGLNALGIKPLSKM 618


>gi|323651378|gb|ADX97535.1| arginyl-tRNA synthetase [Courdo11 virus]
          Length = 438

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 184/480 (38%), Gaps = 74/480 (15%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MH+GH R  ++G++L  L  + G +V R  +I D G Q   L    + R       + ++
Sbjct: 1   MHIGHLRSTIIGESLCRLYEYCGSKVHRVNHIGDWGTQFGMLI--AYIRKFDVTSRDLTN 58

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALN 253
           + E Y     L     E   +   E +      E  L I K+    +++    +    L 
Sbjct: 59  ILEVYRSARKLFESDTEFQKQSLIETVRLQNGFEDNLAIWKEIREISLIS-FNNIYHELG 117

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
              +I I E  +       I D+ +N+  +                +   +D        
Sbjct: 118 THAEI-IGESFYQSRMIDLINDLENNIKNEN-------------GMKVIFIDE------- 156

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                ++   L+KSDG +TY  +DLA  K ++ E+  D +IYV+ S  S + + +  +A 
Sbjct: 157 ----FEIPLILVKSDGGFTYDTSDLAAIKYRFMEQKVDRVIYVVDSGQSQHFQMIFKLAN 212

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV---------- 422
            +S  K +    +   V L  +G   ++  R+G+ + LR V+ +V   ++          
Sbjct: 213 QLSWCKNEQCYHIGFGVILGNNGK--RLKTRSGETVLLRDVLQQVQDRAILVTKSLRQND 270

Query: 423 ------------------RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                             ++  L         FD  K+   +K N   Y+ Y  ARC  I
Sbjct: 271 TLEHDISKISKIIANNCIKYSDLNNPRENNYRFDVDKMIN-TKGNTAAYLMYTLARCHGI 329

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R+  ++   LD D+            D     L + L +Y   IE +     P+ +  Y
Sbjct: 330 LRKISNLSVILDGDI---------EINDADTRCLAILLLKYVEFIEKSIKEHAPHYICNY 380

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           LY+L+      +S+ R    L         +   R++L+H    I++    +IG+ES  +
Sbjct: 381 LYELSVQITKFYSNNRC---LEIENGEIIYVYHNRIRLIHLAIIIMSKMFELIGLESVEQ 437


>gi|284175555|ref|ZP_06389524.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261602455|gb|ACX92058.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 625

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 134/659 (20%), Positives = 253/659 (38%), Gaps = 114/659 (17%)

Query: 6   DFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           D   R K  L E +  ++ + ++ + +  I  P     G LS    + L   +  +    
Sbjct: 2   DIIGRAKKELAEYVATQLGISEEEVFK-NITYPPREELGDLS----LALPSLIKGNIGEK 56

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
            +L+         ++ + IAG  ++N  L+P  L   + S +    +YG   + K  ++ 
Sbjct: 57  TKLLQEY--KGELIEKIEIAG-IYLNAKLNPRNLFVSIFSKLDD--DYGLEKVEKPKRIV 111

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +E  SANP  P+H+GH R  ++GD LA  +   G+ V   +Y+ND G Q+  L   +   
Sbjct: 112 VEHTSANPIHPLHIGHLRNMILGDALARALRARGHSVNVRFYVNDTGRQVAVLIYGLKLL 171

Query: 185 --------------------------YQQALYNNDSDLPEGYYP------------GVYL 206
                                       + L      L E  Y                L
Sbjct: 172 GFPDPEPNVKKDLWLGVIYAMTNVILEIKKLREELKKLSESEYRDKVRDLDELVAVANDL 231

Query: 207 KHVGKELADKYSSEL--LNFPEEKWLPIVKDYSV--QAMMKIIR-----------DDLKA 251
           ++  + L DK +  +     PE +   I+K Y      + KIIR           + L  
Sbjct: 232 RNKNEALFDKLADAINTEEDPEREIGEIIKKYEEGDNELKKIIRKYISYALEGFNETLSK 291

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL- 310
           L+I+ D F  E D      + + +I+  L     +      P K  T    D      + 
Sbjct: 292 LSIKFDNFDYESDL--LWSNKVNEILVAL-----LSSSAKIPYKGVTALDLDSFLGDEVR 344

Query: 311 --FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367
              R           L++SDG+  Y   D+AY   K+ +   D +I V+  +      +L
Sbjct: 345 SKLRIPKGLKIPPLVLMRSDGTTLYTVRDIAYTIFKFNQFNADLVINVIAEEQYIPQIQL 404

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------- 413
                 +   +   N+L      +   G  ++MS R G  IT+  +              
Sbjct: 405 RGALEILGYSRFAENLLHYSYGMVNIQG--LRMSGRLGKIITIDEIYEKLDSIVRNKLKE 462

Query: 414 -------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
                  ++++ + ++R+ +L    ++ L FD  ++    ++N   Y+QY YAR  +I  
Sbjct: 463 KGGNMENINDISNAALRYTILSVSANKPLSFDLNRITSF-EQNSGPYLQYTYARAANILA 521

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           ++ +    L  D    N +  +        ++++ +A++P V +N         L  +L 
Sbjct: 522 KSTE---SLSIDKVDFNDLVGDK------RKILLLIAKFPEVFKNTVDNLRLEDLVAFLR 572

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +L+ VF+  +   R       +Q  +    M++L +V  V+ ++ +GL ++G+ S   M
Sbjct: 573 ELSDVFNSWYDKER------VLQEQDPGKRMLKLYIVKGVSVVLKNGLGVLGIRSLERM 625


>gi|110750821|ref|XP_624685.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 508

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 91/510 (17%), Positives = 183/510 (35%), Gaps = 88/510 (17%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
             L+     + +EF S N   P H+GH R  ++G+ +A+L +F   +VT+  Y+ D G Q
Sbjct: 49  PPLLIDNKNIIVEFSSLNIAKPFHIGHLRSTIIGNCIANLNSFLHNQVTKINYLGDWGTQ 108

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLNFPE----- 226
              + L +       +    + +   Y  Y              + + ++    E     
Sbjct: 109 FGYIYLGMKLSKIDNIEIQKNPIKTLYNVYVDANKLAENNPDMKEEAKKIFQQLELKDNV 168

Query: 227 -EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
             K    +K ++V  + KI     K L I  D +  E  +   + + + + ++ +     
Sbjct: 169 IHKNWETIKQFTVLELEKI----YKRLGIIFDQYDWESMYTIKNINKVINTMEEMQ---- 220

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                          K D   +++++    + +    P+LKSDG+  Y + D+A    ++
Sbjct: 221 -------------LLKLDNHNRKVIY----IDEQKSVPILKSDGTTLYLSRDIAAAIDRF 263

Query: 346 ERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           E+  FD M Y++ +  S +   L  +   +    A         +   + G    MS R 
Sbjct: 264 EKNKFDAMYYIVENGQSDHFTNLIQILNKMKLSWAN-------RLEHVKFGKIQGMSTRK 316

Query: 405 GDFITLRHVV----------------------------DEVGSDSVRFMMLWRKNSELLD 436
           G  I L  ++                            D +G  SV    L +       
Sbjct: 317 GKVIFLEDILNKAKEIMRQRQLEIKTTKVPLDEIDKTSDILGISSVIIHDLKQNRMNNYI 376

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           F +  + +  K +    +QY++ R  ++       +  + D  L        E E D   
Sbjct: 377 FHWNSILD-VKGDCGIKLQYSHCRLCNLEELCGAMLVTECDPHLLK------ELEVD--- 426

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
             LI+ ++++  ++  +    EP  L  YL+ L    +  W+          ++     +
Sbjct: 427 -NLIILISQFDEIVLKSYKELEPCILTIYLFHLCKSINIAWNKLN-------IKNQPSDV 478

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              RL L      I+  G+ ++G+    +M
Sbjct: 479 ANQRLLLFRVAKMILAQGMKLLGLTPLEKM 508


>gi|255513612|gb|EET89878.1| arginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 632

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 120/613 (19%), Positives = 231/613 (37%), Gaps = 92/613 (15%)

Query: 42  HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101
            G +S N A  +++ +   P  +A  I++ I     V SV     GFIN YL       +
Sbjct: 43  FGDISCNIAFRIAKSISRKPADVASSIISGIGGIEAVKSVKEEN-GFINFYLDRKKFTAL 101

Query: 102 LSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +   ++ G     ++ IG G  V +E  SANP  P+H+G  R A++G+ LA++ A  GY+
Sbjct: 102 VMEWLLKGGSNAVKSTIGSGKIVVVESPSANPVHPLHMGQVRNALIGNVLANIYAVCGYK 161

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKY 217
           V RE YI+D G Q+      +    +  +  N +   +     VY+   K+       + 
Sbjct: 162 VEREDYIDDLGFQVAQAVWGLMHLEELGIEINPNGKFDHEIGKVYVEVNKYAETHEIKED 221

Query: 218 SSELLNFPEEKWLP---IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +++L   E+       + +D + + +M    + L  LNI HD+ + E D  R       
Sbjct: 222 IAKVLTLMEQDGTYESVLCRDSAEKYVMAEY-ETLFELNIYHDLLVWESDIIR--EKLFE 278

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +  +  +G +        K         DR + L        +  + L++S+G+  Y 
Sbjct: 279 KAMKIMEDKGVI--DRPKEGKYAGCAIISFDRIKDLPEEFRNLKENVKVLVRSNGTPDYV 336

Query: 335 AADLAYFKCKYER--------------------------------GFDNMIYVMGSDHSG 362
           A D+A+   K+                                    D  +  + +  S 
Sbjct: 337 AKDIAFHMWKFGIFEDSFKYREFVKQPGGSSLYTTSEDGSRMNFGNADMAVNPIDTRQS- 395

Query: 363 YVKRLE--AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--TLRHVVDE-- 416
             ++     V  ++   +   N+       +  +G   K++ R G ++  T   ++ E  
Sbjct: 396 -FEQSFVRLVIDSIGYPEKARNLKHLAYGVVDIEGA--KLAGRKGTWLGYTADDLIREAR 452

Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                   V   ++RF  L   N + L+F +       +     
Sbjct: 453 ERAYGLIGARFETSQEERASIAAKVALAAIRFEFLRLSNEKKLNFSWATALNF-EGRSGP 511

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y QY +AR   I     +        +  ++ I      D  E +L+  ++    V+E +
Sbjct: 512 YCQYMFARANRILENYGNEG------VLYKSTIKVSGIEDDLEFELVKKMSGCVTVLERS 565

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P  L  Y  +LA +F   + H         ++  +    + RL++V     ++++
Sbjct: 566 CRELKPNLLVEYAGELALLFGKFYEHKN------ILKLQDEDEKLSRLEIVTCFKVVMDA 619

Query: 573 GLNIIGVESPNEM 585
            L ++GVE  ++M
Sbjct: 620 VLTVLGVEPLSKM 632


>gi|294934539|ref|XP_002781131.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239891437|gb|EER12926.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 508

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 81/410 (19%), Positives = 150/410 (36%), Gaps = 37/410 (9%)

Query: 37  PRDCAHGHLSTNAAMILSRPLG-------LDPLTIAELIVARIKID--PDVDSVFIAGKG 87
             +   G    N AM L++            P  I E I + +  +   + +SV +A  G
Sbjct: 35  TANPKFGDYQCNNAMGLAKKFKSELPDGMKIPKQIGEKIKSNLMEESPEEFESVTVAPAG 94

Query: 88  FINLYLSPSYLRKILSSIVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+ + LS  ++ K L+S    G +           KV ++  S N    MHVGH R  ++
Sbjct: 95  FVTVKLSSGWIAKQLTSKCKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLRSTIL 154

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGV 204
           G+T++ ++ +SG +V R  ++ D G Q   L   +   Y   L++     DL   Y    
Sbjct: 155 GETVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHTPEVSDLQTFYKAAK 214

Query: 205 YLKHVGKELADKYSSELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                  +   +   E++     +++             K   +    L I+      E 
Sbjct: 215 KRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYNRLGIEGLKEQGES 274

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            ++      I   ++ L ++G V                + +  + +F      DDV   
Sbjct: 275 FYNEM----IGPTVETLEKEGLV---------------VESNGAKCIFTDV---DDVPMM 312

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           ++KSDG Y Y + D+     +  +   D ++Y+       + K+L  VA           
Sbjct: 313 VVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPPQT 372

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            L      +       K   R+G  + L  ++DE   D  +  +  R N+
Sbjct: 373 KLEYLGFGVVCGDDGKKFKTRSGATVKLTDLLDE-AEDRAKKELESRLNA 421


>gi|15921521|ref|NP_377190.1| arginyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|23822200|sp|Q971X1|SYR_SULTO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15622307|dbj|BAB66299.1| 623aa long hypothetical arginyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 623

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 142/666 (21%), Positives = 255/666 (38%), Gaps = 124/666 (18%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M    +        L E   ++ +++  +     E P     G +S              
Sbjct: 1   MNPIKEVKLEFAKILSE---RLSIDQNKIYE-NFEYPPKEQMGDVSLPL----------- 45

Query: 61  PLTIAELIVARIKIDPDVDSV--FIAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           P       +  I   P    +   I   G +IN  ++ S L K++ +      +YG   I
Sbjct: 46  PTVTKNKELLNISDFPSGGKLIREIKKAGIYINGVINESELFKLIFTNF--PEDYGIEKI 103

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K  +V +E  SANP  P+HVGH R A++GD +A ++   G+EV   +Y+NDAG Q+  L
Sbjct: 104 QKPQRVVVEHTSANPIHPLHVGHLRNAILGDVIARMLKARGHEVNTRFYVNDAGRQVAIL 163

Query: 178 ALSVFWRYQ--------------------------QALYNNDSDLPEGYYPGV------- 204
            L      +                            L    S   E  Y          
Sbjct: 164 TLGYLLLGEPNPPRDEKIDQWIGVIYAITNILIEINQLKKELSSSNEEEYRQKISKLDEL 223

Query: 205 -----YLKHVGKELADKYSSELLNFP--EEKWLPIVKDYS--------------VQAMMK 243
                  +    E+ DK + E+      EEK   I+K+Y               V   ++
Sbjct: 224 ISLAGKHREKYPEIFDKLADEISKIENIEEKIQNIIKNYERHSDEKIVNVIRKLVNWTLE 283

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKC 302
             +D LK L+I  D F  E D        + +I+   L+ +       +   K       
Sbjct: 284 GFKDSLKILDIHFDNFDYESDL--LWSKRVDEIVKLALSSKN------IKEHKGTIALSL 335

Query: 303 DMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDH 360
           D+D +     +  +G ++    L++SDG+  Y   D+AY   K+E  + + +I V+    
Sbjct: 336 DLDPEARKRLNIPLGLELPPLVLVRSDGTTLYTTRDIAYSLYKFEVFYANKVINVIAEQQ 395

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS- 419
           S    +L A    +  K    N++      +   GM  +MS R G +I+L  +++EV   
Sbjct: 396 SVPQMQLRASLYLLGFKDIAENLIHYSYGMVNLQGM--RMSGRLGRYISLDEIINEVKEV 453

Query: 420 --------------------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                                ++R+ +L    ++ + F+   + +  + N   Y+QY YA
Sbjct: 454 AENKIKEKGGDLNNLLDIVNSAIRYAILSVSANKPVSFNIKNIVDFDQ-NSGPYLQYTYA 512

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R  +I  + ++    LD +    + I  +        +L++ +A++P V   A     P 
Sbjct: 513 RAYNILAKNEE---KLDINKVDFSDIVDDK------RRLLISIAKFPEVATKAVDELRPE 563

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  ++  +A +F+  ++  R       +Q  N    M+RL +V  V  I+ +GL+I+G+
Sbjct: 564 DLLGFMRSIADIFNRWYNFER------VLQEPNEGKRMLRLFIVKGVERILYNGLSIVGI 617

Query: 580 ESPNEM 585
           +    M
Sbjct: 618 KPLKRM 623


>gi|322435660|ref|YP_004217872.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9]
 gi|321163387|gb|ADW69092.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9]
          Length = 674

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 127/703 (18%), Positives = 242/703 (34%), Gaps = 149/703 (21%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           ++      L   ++ +       +  L ++ +E+P   A G L+   A  L++ L   P 
Sbjct: 1   MYRTIQQTLLGRIQALLSSKY--EITLTQLAVEQPPSIALGELALPVAFELAKRLRKAPR 58

Query: 63  TIAELIVARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
            IA  +   +  D    P V SV +AG G++N+ L  +   + +++   +        +G
Sbjct: 59  AIAMELAEALNGDLASLPGVASVEVAGAGYLNVRLDRAAAVQSIAADRHA-------DLG 111

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA----FSGYEVTREYYINDAGAQI 174
                 IE  S NP    H+GH R A++GDT   L+      +GY+V  + YI++ G Q+
Sbjct: 112 GAGFRLIEHTSINPNKAAHIGHLRNAILGDTFQRLLRKDEYKTGYDVGVQNYIDNTGVQV 171

Query: 175 NTLALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             + +       + L +    L E          Y   +   ++  Y+   +   E +  
Sbjct: 172 ADVVVGFTELLGKDLKSVRELLTELIETNQRIDFYCWDLYARVSQWYTEAGVAAEELQRR 231

Query: 231 PIVK------------DYSVQA------MMKIIRDDLKALNIQHDIFISED---DFHRGD 269
             V+            D +V A      +++   D ++ L I++D    E      H  D
Sbjct: 232 KQVRLDTLHALEHGGNDIAVIADIVATDVLRRHLDTMQRLGIEYDFLPRESEILSLHFWD 291

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLKSD 328
            +        +  +G +Y+      + K      M R      +   G D+  + +++S+
Sbjct: 292 AAR-----KLMIEKGVLYQ----ETEGKNKGCWVMRRAGTDGATEDSGPDEEAKVIVRSN 342

Query: 329 GSYTYFAADLAYFKCKY---ERGF---------------------------------DNM 352
           G+ TY   D+AY   K+   E+ F                                 D +
Sbjct: 343 GTVTYVGKDIAYHLWKFGLLEKDFGYVKFHEYATHTCWISTGDMGASDPAHPVFAKADAI 402

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRL------------------- 391
             V+ S  S     + A    +    A  +      E V L                   
Sbjct: 403 YNVIDSSQSDPQNNVIAALRGMGYTDAADRYTHFSYEKVALTPRCAVELGYTISDEDKAR 462

Query: 392 ------YRDGMPIK---------------MSKRAGDFITLRHVV--DEVGSDSVRFMMLW 428
                  R G+ +K               +  R  +      +V   ++   ++R+ ML 
Sbjct: 463 PFIEVSGRKGLGVKADDLLDKLTAAAKAELDTRRPELTEDERLVIAGQIAVGALRYFMLR 522

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPDLDFDLFPRNVIP 486
              + ++ FDF        E    YVQYA  R  +IFR++   +           +    
Sbjct: 523 FNRNTIIAFDFKDALSFEGE-TGPYVQYAIVRAANIFRKSGVTEREALAGLAGADKLTEL 581

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
              E      +  + ++    V++ A  + EP  LA Y++ LA  F+  +          
Sbjct: 582 LGGEEGGGIWETWLAVSRLTAVLDLAINSAEPAHLAKYVFQLAQQFNNFYHRFH------ 635

Query: 547 FVQANNRKLTMMRLQLVHAVASIIN----SGLNIIGVESPNEM 585
            +   + +       L+   A++        L  +G+E+P  M
Sbjct: 636 ILNEMDAERK----ALLLGTAAVAKREMIRALGFLGIEAPAVM 674


>gi|307610759|emb|CBX00370.1| arginine tRNA synthetase [Legionella pneumophila 130b]
          Length = 306

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 33/297 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           + A     LK  L  +    ++   +   I +E  +D AHG  +TN A++L++P    P 
Sbjct: 1   MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 60

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +AE +VA I  DP V+ + IAG GFIN ++  +    I+S I+  G E+G+  +G+  K
Sbjct: 61  VLAERLVAVIPADPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGQGNLGQSQK 120

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V IEFVSANPTGP+HVGH R A  G TL +++  +GY+VT EYY+NDAG Q+N LA+SV+
Sbjct: 121 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 180

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228
            RY + L       P   Y G Y+  + +E+  +  ++ +        N P ++      
Sbjct: 181 LRYLE-LAGEPIAFPANGYKGQYVYEIAQEMWSEQGNQFVHPWISVVDNLPADEPEGGDK 239

Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                                    ++++ ++  I+DDL+A  ++ D + SE     
Sbjct: 240 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLFE 296


>gi|74185395|dbj|BAE30171.1| unnamed protein product [Mus musculus]
          Length = 397

 Score =  239 bits (610), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 81/419 (19%), Positives = 165/419 (39%), Gaps = 63/419 (15%)

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +Y     +    E   K + + +   + K   I+K  +   +  + R++ K +    DI 
Sbjct: 9   FYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIMK--AWNLICDVSREEFKKIYDALDIT 66

Query: 260 ISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           + E    F++     ++DI+     +G+V                  D ++++F   + G
Sbjct: 67  LIERGESFYQ---DRMKDIVKEFEDKGFVQVD---------------DGRKIVF---VPG 105

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
             V   ++KSDG YTY  +DLA  K + +E   + +IYV+ +  + + + + A A  +  
Sbjct: 106 CSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGW 165

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
              ++ ++      +       K   R+G+ + L  +++E                    
Sbjct: 166 YDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTE 225

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    V    +++  L         F F K+ +  + N   Y+ YA+ R RSI R 
Sbjct: 226 EELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARL 284

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           A     ++D  +  R     +   D   E +L   +  +P +++        + L  Y+Y
Sbjct: 285 A-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIY 339

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +LA+ F   +       + R       K+ M R+ L  AVA+++  G +I+G++    M
Sbjct: 340 ELATTFTEFYDSCYCVEKDRQ-TGKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 397


>gi|27379867|ref|NP_771396.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353020|dbj|BAC50021.1| bll4756 [Bradyrhizobium japonicum USDA 110]
          Length = 225

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 5/224 (2%)

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           ++A   A +  K  ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG D+VRFMM
Sbjct: 1   MQAAVKATTSGKGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGQDAVRFMM 60

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVI 485
           L+RKN  +LDFD  KV EQS++NPVFYVQY +AR  SIFR A  ++FPDL  D   R   
Sbjct: 61  LYRKNDAVLDFDLAKVMEQSRDNPVFYVQYGHARGHSIFRNARAEVFPDLPDDTAKRIAW 120

Query: 486 PQES----EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
             ES      D  EL L+  LA YPR++E A  A EP+++AFYLYDLAS FH  W+ GR+
Sbjct: 121 LSESAVERLSDPVELDLLKRLAIYPRMLEAAAAAHEPHRIAFYLYDLASEFHALWTKGRD 180

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P LRF+  N+  LT  RL +V  V S++ SGL I+GV +P+EM
Sbjct: 181 LPYLRFIINNDADLTKARLAMVQGVVSVLASGLAILGVHAPDEM 224


>gi|326435569|gb|EGD81139.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 701

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 156/376 (41%), Gaps = 48/376 (12%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL- 59
           M + AD           I         +   I I   +    G    NAAM ++  L   
Sbjct: 58  MRVVADLMR------STIGIAFPEFADVDPSITIPAAKVKNAGSYQCNAAMNINNKLKKQ 111

Query: 60  ----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
               +P  +A+ I   +  +P VD + +AG GFIN++++ S+++   + ++  G      
Sbjct: 112 GVKSNPREVAQKIADSLPENPVVDKLEVAGPGFINVHVAKSFVQAQTNKLLRKGALAP-- 169

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            I +  KV ++F S N    MHVGH R  ++G++++ ++ F+G+E  R  ++ D G Q  
Sbjct: 170 PIDRKLKVIVDFSSPNIAKEMHVGHLRSTIIGESISRVLEFAGHETHRVNHVGDWGTQFG 229

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L   +   +           P G     Y         D+       F +  +   VK 
Sbjct: 230 MLIAHLKDEFPDYKTKAP---PIGDLQAFYKASKVLFDQDE------EFKKRAYGETVKL 280

Query: 236 Y--------SVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGY 285
                    + Q +  + R + + +  + D+ I E    F++   S ++ +++ L ++G 
Sbjct: 281 QSGDPDVTLAWQLICDVSRREFQDIYNRLDVTIEEKGESFYQ---SRMQGVVEELTKKGL 337

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           V +    P             +++ + S     ++   ++KSDG+YTY  +DLA  + + 
Sbjct: 338 VIDDPENP------------GRKIAWTSAREQTNIPLIVVKSDGAYTYDTSDLATLRYRV 385

Query: 346 -ERGFDNMIYVMGSDH 360
            E   D ++YV+G   
Sbjct: 386 QEEKADWVVYVVGQSQ 401


>gi|218514942|ref|ZP_03511782.1| arginyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 187

 Score =  237 bits (606), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 103/187 (55%), Positives = 144/187 (77%), Gaps = 1/187 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  +A++I+A++K D DV  V +AG GFIN+ LS  Y +++L+S++ SG +YGR+ +G 
Sbjct: 61  NPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLGA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA 
Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180

Query: 180 SVFWRYQ 186
           SVF RY+
Sbjct: 181 SVFLRYR 187


>gi|158299141|ref|XP_319244.3| AGAP010086-PA [Anopheles gambiae str. PEST]
 gi|157014226|gb|EAA14606.3| AGAP010086-PA [Anopheles gambiae str. PEST]
          Length = 568

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 93/499 (18%), Positives = 182/499 (36%), Gaps = 77/499 (15%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +EF S N   P H GH R  ++G+ L++L  F G  V R  Y+ D G Q   LAL 
Sbjct: 113 QTMIVEFSSPNIAKPFHAGHLRSTILGNFLSNLNEFLGNRVLRLNYLGDWGTQFGYLALG 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL-----LNFPEEKWLPIVKD 235
           V  +       +   +   Y   V+     +   + +   +     +       L   ++
Sbjct: 173 VQLKGLSPTDIHQDPIKCLYDAYVHAYEAARNSPNMHEHAMNIFARMENGTADDLDQWQE 232

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y     +K + +  + L +    +  E  +     + I  +++ L + G +        +
Sbjct: 233 YRA-YTVKELEELYRRLGVCFTSYEWESQY---GVNKIAHVLETLKQHGLL------IDQ 282

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354
               +   + ++++             P++KSDGS  Y   D+A    +Y R  F   IY
Sbjct: 283 PDGRKVVQLQQRKM-------------PIVKSDGSGMYLLRDIAALMDRYNRFEFHKCIY 329

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+ +  + +        A++SE    + +     V   + G    MS R G  + L+ ++
Sbjct: 330 VVENGQNDHF-------ASLSEIAHLLCLPYAAGVEHVKFGRIHGMSTRRGKVVFLKDIL 382

Query: 415 DE----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            E                            +G+ +V    L ++  +  +FD+ K+  + 
Sbjct: 383 HEAQQLVQEKQRESPYTKTNAADDPSVCDILGTSAVIINDLKQRRMKDYNFDWSKIL-RM 441

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + +    +QY + R  S+   A+    D+             S  +   L L+  +A + 
Sbjct: 442 EGDSGIKLQYTHCRLASLLH-AQSSAEDI-----MSIQCDGSSLVEPEALDLVCQMANFK 495

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V   A  A E   L  YL+ L    +           L   Q +  K    R+ L    
Sbjct: 496 PVCYQAQEAAEACILVAYLFRLCKSIN------LAIKTLPVKQESEVKKRQQRILLFSRA 549

Query: 567 ASIINSGLNIIGVESPNEM 585
             ++++G+ ++G+    EM
Sbjct: 550 KLVLHTGMTLLGLRPLEEM 568


>gi|281208239|gb|EFA82417.1| arginyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 711

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 111/641 (17%), Positives = 218/641 (34%), Gaps = 135/641 (21%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--------PDVDSVFIAG 85
           +  P+  A    S +    LSR LG D   I E +   I+ D          +  V +  
Sbjct: 115 VTVPKIKA--DYSISNTFQLSRQLGGDNKKIVEQMRQLIQKDIDENRDGMSLIKDVSVEK 172

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGR---------NLIGKGTKVNIEFVSANPTGPM 136
             F+N+ LS  YL + L+  +                  L  +  +V ++F S N +  +
Sbjct: 173 N-FVNVSLSQDYLEQSLAVWLKGEAPLYELTKQHKQSLQLPLEPKEVLVDFASPNMSKEL 231

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R   +G+++  ++ +  + V R  +  D G  +  +         + L +     
Sbjct: 232 HVGHLRSLALGESVCRILEYRNHRVERVSHAGDFGTPMGMVISYALENKAEFLRH--IWD 289

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI------------ 244
            +     +      K+L+  YS        +         +   + K             
Sbjct: 290 KQSGLSSMPFIPTPKQLSTIYSDAKKLTKTDSEFSKRAHLAAAELQKGPPTTTSGDNNNG 349

Query: 245 --IRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               D  +A     DI + E    ++R     +   I+ L     V E            
Sbjct: 350 GSDPDIYRAWLDLMDINVKERGESWYR---EMLEPAIEELRSLNMVSES----------- 395

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD-NMIYVMGSD 359
               +    +F            + KSDG+Y Y   D+A  K +        +I +    
Sbjct: 396 ----EGAVCVFLED---QKTPVIIKKSDGAYLYATTDIAAIKNRLVTNKKQWVIIITDDS 448

Query: 360 HSGYVKRLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              + +++  +A      +         L   V    +G  +K+S R GD + L  ++ E
Sbjct: 449 QKQHFQQVFTIAQLAGWYRPDTEHRVDHLSFGVVRGENG--LKLSSREGDPLALEELLQE 506

Query: 417 -----------------------------------------------------VGSDSVR 423
                                                                +G  +++
Sbjct: 507 AIQRAKDATITSRSLTRAEKLDQTHTAQQLDGADRVEDRFELDQYNTWEHYRKIGLGAIK 566

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +  L ++++    F F ++    K N   Y+ Y Y R  ++ ++A+     +D + F   
Sbjct: 567 YFDLSQRSNS-YTFSFDRMLSF-KGNTSIYILYCYTRISTLMKRAQFDINAIDLNTFKF- 623

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
                 EF   E +L++ ++++P VI        P  L  YL+D++  FH  +   R   
Sbjct: 624 -----KEFSEKERKLVLMISKFPDVIRATESTLRPAVLCDYLWDISDCFHHFYESER--- 675

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
               V  ++  +    L + H + +IIN+G +++G+E+ + 
Sbjct: 676 ----VIGSDTMVQK--LLIAHVIQNIINTGFHLLGLETVDR 710


>gi|41615001|ref|NP_963499.1| hypothetical protein NEQ208 [Nanoarchaeum equitans Kin4-M]
 gi|40068725|gb|AAR39060.1| NEQ208 [Nanoarchaeum equitans Kin4-M]
          Length = 537

 Score =  237 bits (604), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 107/511 (20%), Positives = 193/511 (37%), Gaps = 65/511 (12%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
                K     +++ S N   P HVG+ R A++G+ L +++   GY V    +  D G Q
Sbjct: 53  PPTYKKNQTYVLDYFSPNIGKPPHVGNLRSAIIGNPLKNILRKVGYNVISINWWGDFGTQ 112

Query: 174 INTLALSVFWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
              L  +   +   ++   N    L E Y           E+ +    E     E  +  
Sbjct: 113 FGELIYAFKTKGDEKELRKNPIKHLFELYTWFNRELEKNPEIKNYAREEFKYLEEAMYKG 172

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD--------IIDNLARQ 283
           I  D S     K + + LK    +   +I    F       +R+          D  + +
Sbjct: 173 IQIDVSPFFEGKPLSELLKNKTREEQNYILWKIFREITIKYMREQFYPKLKLEFDEESGE 232

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
            +  +      K    +    + K  +   T  G  +   LLKSDG+  Y   DLA    
Sbjct: 233 SFFLKKAKEVAKELLEKGVAEEDKNSIIVRTPYGVAL---LLKSDGTTLYLTRDLAAAIE 289

Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMS 401
            YE+  FD  IYV+ ++ S +  +L  +A   +     ++  L   L+ L  +    K S
Sbjct: 290 HYEKYKFDKKIYVVANEQSQHFNQLIYIAKKANYPFADKLYHLKFGLLLLKTEEGVKKFS 349

Query: 402 KRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSEL 434
            R G  +    ++++                           +G  +V + ++     + 
Sbjct: 350 TRKGRAVFAEDILEKAYELAKEEILKRNKDKPLEEIEKNAKIIGYGAVIYAIVRYDPKKD 409

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + FD+ K+   + +  VF +QY+  R + I  +                 I + +  +  
Sbjct: 410 IIFDWDKILSLNGKTSVF-IQYSAVRAKHILDKYNKP-------------IERPNNLEKD 455

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E +L++ L  Y  V+E +    +P  LA YLY+LA  F+  +   R       V  +NR+
Sbjct: 456 EERLLLWLFYYYAVLEESARKLKPNILAEYLYNLAEEFNRFYEKNR-------VIGSNRE 508

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               R+ LV+    I+  GLN++G++ P  M
Sbjct: 509 KE--RVWLVNKTYQILKEGLNLLGIDVPTFM 537


>gi|156083208|ref|XP_001609088.1| arginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796338|gb|EDO05520.1| arginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 669

 Score =  236 bits (602), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 120/656 (18%), Positives = 223/656 (33%), Gaps = 100/656 (15%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F    + +K  ++ +      E        + R  D   G + T  A  +S+   +   T
Sbjct: 36  FTGIETIVKRGVERLCDSQANEVITGALRPLVRIADGCEGDIHTKIAHTVSKLAQIPIET 95

Query: 64  IAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            A  +   +K + D     F+ G  ++N+ L   Y+R +L  +                 
Sbjct: 96  AAIRLRDELKKESDAVKDCFVTGNHYVNIVLHDGYIRNVLREMDSDQAVRLGVPYMSSGT 155

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           V +++ S N    +H+GH R A +G  L++++ F G  V R  ++ D G+Q   +   + 
Sbjct: 156 VVVDYFSPNVGKDLHMGHLRSAAIGAALSNILEFCGSRVIRRNHVGDFGSQSGQIMRYLM 215

Query: 183 WRYQ---QALYNNDSDLP--------EGYY------------------PGVY-------- 205
                  +A   + +D             Y                  PGV         
Sbjct: 216 EYDPTSIEAFTESQTDKERAKEFTRLIDGYSIWSIKGITTSGRFSRPTPGVSAELIINTM 275

Query: 206 --LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII--------RDDLKALNIQ 255
             +    KEL D      L   EE  L     +  Q   K I        RD L+   + 
Sbjct: 276 GEIYKNAKELCDTDPEFQLRSKEETALLQRGKHMYQECWKSIVKTSIASHRDILEQFKLD 335

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
               + E  +       +   +D L +QG+                 +          T 
Sbjct: 336 AIRDVPESCY----AKRVFAFVDRLVKQGHALARPDGSIVIPWQALNEQSG------DTP 385

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
             +  D  L+  +G+ TY A D+   + +  E   + +IY+       +  ++ A+A  +
Sbjct: 386 TEELHDLVLITKEGAATYLAVDITALEYRLSEHKPNEIIYITDLAQKPHFDKVIAIARHI 445

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV--------VDEV--------- 417
              K Q    L     L  DG   KM  R    + +  +        +DEV         
Sbjct: 446 GFLKDQKIEHLGFGAVLSEDGK--KMRSRTKTGVNVHDIWKYTLKRCLDEVEKKGEFLGQ 503

Query: 418 ---------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467
                       S+ +  L  K+++   F   ++  Q   N +  + Y Y R RSI R+ 
Sbjct: 504 ASMCMAHKLAVGSMLYADLSTKHTDTYVFSTDRLLNQ-GGNNLISILYPYVRARSILRKI 562

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            +D    ++ DL+     P     + S  QL +H+      I      + P++L  Y+  
Sbjct: 563 EQDAIKVVNEDLWLVGGKP---FLNRSARQLALHILGLENAIFTTAYLKTPHRLCKYVRS 619

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           L  +F   + + R   + +   A    + ++RL    A   ++     ++ +E+  
Sbjct: 620 LGRIFTHFYDNNRVIDQGK---AEADLVHLVRLF-SQATKLVLK----LLNIETLE 667


>gi|145631015|ref|ZP_01786791.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983482|gb|EDJ90958.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 321

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 128/343 (37%), Gaps = 58/343 (16%)

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  I+++L +QG   E               +D  +        GD +   + K DG +
Sbjct: 8   MLPSIVEDLKKQGLAVEN-------DGALVVYLDEFK-----NKEGDPMGVIVQKKDGGF 55

Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-V 389
            Y   D+A  K +YE    +  +    +  S ++++   +           ++      +
Sbjct: 56  LYTTTDIAAAKYRYETLKANRTLVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGM 115

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422
            L +DG P K   R G  + L  ++DE                           +G  SV
Sbjct: 116 MLGKDGKPFK--TRTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKQAVIEAIGIGSV 173

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           ++  L +  +    FD+  +    + N   Y+QYAY R RSIF + +     L       
Sbjct: 174 KYADLSKNRTTDYVFDWDNMLSF-EGNTAPYMQYAYTRIRSIFNKTEINSTAL------- 225

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
            +    +  D  E  L + L ++   ++       P+ L  YLY+LA +F   + H    
Sbjct: 226 -LAAPLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFSSFYEHC--- 281

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 282 ---PILNAEDEAVKLSRLKLALLTEKTLKQGLALLGIKTVEKM 321


>gi|253317262|ref|ZP_04840475.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 211

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 2/211 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       L   +     K  +  +I D I IE P+D  +G  +TN AM+L++    +
Sbjct: 1   MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59

Query: 61  PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           P  IA+ IV  +  +      + IAG GFIN YL   YL  I+   +  G ++G     K
Sbjct: 60  PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           G  V +E+VSANPTG +H+GH R A VGD LA+++  +GY VTREYYINDAG QI  LA 
Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           S+  R+ +AL +N   +PE  Y G  +  +G
Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210


>gi|66806687|ref|XP_637066.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60465463|gb|EAL63548.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 738

 Score =  234 bits (597), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 121/687 (17%), Positives = 254/687 (36%), Gaps = 132/687 (19%)

Query: 7   FSSRLKNYL-KEIDCKIKVEKKILDRIVIE--RPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F S  +  L KE   K+   +KI  +  +     +       S +  ++ S  L  +   
Sbjct: 74  FKSIFEKALTKEEIEKVFKNEKIKYQASLSTVPSKKVFDHDYSLSNLVVASMLLKDN--N 131

Query: 64  IAELIVARIKID-------PDVDSVFIAGKGFINLYLSPSYLRKILSSI----------- 105
           + + ++   + +         ++ + ++ KG +NL +S  YL  IL              
Sbjct: 132 LGQKLIDAFESNKSEIPYSSMIEKLELSNKGHLNLRVSDEYLTTILKLWINPNEDKSKFL 191

Query: 106 -----------VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                      +    +  + L  +  KV ++F S N +  +HVGH R   +G+++  ++
Sbjct: 192 IDNLKFQDDVNLNEMEKENKLLPIRSKKVLVDFASPNMSKELHVGHLRSIALGESICRIL 251

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            + G++V R  +  D G  +  +           L +      +   P   +    KEL+
Sbjct: 252 EYMGHDVERISHAGDFGTPLGIVLAHSLETNADYLKHIQDPTCKDNEP---IIPTPKELS 308

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALN------IQHDIFISEDDFH 266
           + Y++       ++       ++     K   I D +          I +D ++S  +  
Sbjct: 309 ELYTTSKKRTKSDEQFSKRTLWTAAEFQKGPPIYDKVSGEQIGGSDPIVYDAWLSLCEAS 368

Query: 267 RGDPSPIRDIID-NLARQGY-----VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD- 319
           R   + +  ++D N+  +G      +  G++             D ++ +F       D 
Sbjct: 369 RIGFNKVFQMLDINVNERGESFYRDMLPGVIEDLTKMGFVDISDDGRKCIFLDKTKCKDS 428

Query: 320 -VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVS 375
            V   + KSDG+Y Y   D+A  K + E G + +I +     S + +++  +A     ++
Sbjct: 429 QVPVVVQKSDGAYLYATTDIAAIKHRVENGKEWVIVITDDSQSDHFQQVFKIAEDANWLN 488

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSE 433
            K+ +++ L   +V   R     K+S R G+ I L  ++ E    S +   L +    SE
Sbjct: 489 RKQTRVDHLSFGVV---RGPNGQKLSSRDGNPIALIDLLQESIERSKQATSLSKSFTRSE 545

Query: 434 LLDF-------DFCKVKEQSKE----------------------NPVFYVQYAY------ 458
            LD        +  ++ +  +                         + Y   A+      
Sbjct: 546 KLDITQNANNVEINRMLDTFENNNNDDNNNETTIDEKHFLKIGMGALKYYDLAHRNNPYV 605

Query: 459 ---------------------ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                                 R  ++ R+A     +L+ +L       +  EF   E  
Sbjct: 606 FSYDSILSFKGNTSIYILYCYTRISTLLRRANFDGLNLNPNLI------EFKEFTEKERN 659

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           L+  ++ +  V++    + +P  +  YL+DLA+ FH  +   +       +  N R    
Sbjct: 660 LVFIMSRFSDVMKGTEQSLKPGFICDYLWDLANSFHQFYETEK-------IIGNER--QD 710

Query: 558 MRLQLVHAVASIINSGLNIIGVESPNE 584
            RL +  AV  I+++GL+++GVE+  +
Sbjct: 711 QRLFICLAVQRILSTGLHLLGVETVEK 737


>gi|48477675|ref|YP_023381.1| arginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430323|gb|AAT43188.1| arginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 542

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 119/569 (20%), Positives = 229/569 (40%), Gaps = 94/569 (16%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M LF D+  +L   + +++   K+E K  +        +  HG +S     I       D
Sbjct: 1   MLLFDDYKRQL---ITKLNSVYKIEDKDAEI-------NTEHGDISIRLFRI-----KDD 45

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  I   I   +K +  ++   I G+ ++N++L    +  IL       +    ++    
Sbjct: 46  PEVIKNNIYNILKKEAYIERFEINGR-YLNIWLKTRLMFDILLDAF-DRLGTYPDVFQDA 103

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +E  SANPTGP+H+G  R +++GD++A ++  +G  V  +YY+ND+G Q+    L 
Sbjct: 104 EKALVEHTSANPTGPIHIGRTRNSIIGDSIARIIERTGMRVMTQYYVNDSGKQV----LY 159

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           ++  Y++   N +  +         + +   E  +   SEL    E+     +K     A
Sbjct: 160 LYIGYEKFHKNEEPTVENLLDGYQKIYNNIDESIENEVSELSRLYEKGDTETIKKIQNIA 219

Query: 241 --MMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             ++  I + LK +++    ++ E  F   G  S +  +++N                  
Sbjct: 220 GIVLSSIMESLKKIDVNIMSYVWESSFIINGSTSRVMSMLEN------------SIKNDG 267

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  + + +++              L +SDG+  YF  D+AY   K    +D +I V+G
Sbjct: 268 DAKYIEYNGRKI-------------YLTRSDGTSLYFVRDIAYHLYKAG-DYDFIIDVLG 313

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-- 415
            DH  + + LE V   + +  A +  +  + + L       KMS R G+ +TL  + +  
Sbjct: 314 EDHKEHARNLEYVLKDLLDFNANLRFVFYDFISL----ESGKMSTRKGNIVTLDELYNKT 369

Query: 416 -------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     + S S+RF +     ++ + F + +     + + 
Sbjct: 370 VDESIKIVKEKRPEYSEEKAREIAVAIASSSIRFNISKVNQNKPMTFRWSEALNF-EGDS 428

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+ YAYAR +SI R+  +                + ++F+  E  LI  +  YP  ++
Sbjct: 429 APYIMYAYARAKSIIRKISENNTG------------ELNDFNDYERSLIKDMFLYPYYLK 476

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           +A     P  +A YL  L   F+  +   
Sbjct: 477 SAFENLRPDIIANYLLLLVKSFNDFYMKC 505


>gi|322692397|gb|EFY84312.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 611

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 92/544 (16%), Positives = 173/544 (31%), Gaps = 110/544 (20%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           LR         G+    +       V IEF S N     H GH R  ++G  L++L   S
Sbjct: 121 LRDDYGFNTKHGLRDPADAEAGKKTVIIEFSSPNIAKKFHAGHLRSTIIGGFLSNLYEKS 180

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK--------HV 209
           GY V R  Y+ D G Q   LA        +  +  D   P G+   +Y+K          
Sbjct: 181 GYIVVRTNYLGDWGRQYGLLACGWKRYGDEVAFAQD---PIGHLFDIYVKISADFEPEEE 237

Query: 210 GKELADKYSSE------------------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             + A K   +                   +   +E  L + + +   ++ K  ++    
Sbjct: 238 AFKAAGKRGEDTSLLESRGILGEAKAYFKQMEDGDELALELWRRFRELSI-KRYQETYAR 296

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           LNI  D++  E    +       DI+                   K     ++       
Sbjct: 297 LNIHFDVYSGESQVKKETMEKAEDIL-------------------KHRHVIELTEGAWAV 337

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
                G       +  +  +        + +   ER               ++ RL  + 
Sbjct: 338 DFKKYGTKGLDVAIIRNRQWHVQLPSAGHRRGSAER-----------RGGTHLNRLFKIL 386

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-------------- 417
           + + +        L + ++    G    MS R G    L  ++ +V              
Sbjct: 387 SLMGDPYNT----LAKKMKHVSYGKVNGMSTRKGTVKFLDDILADVGDFMHDIMRRNEQK 442

Query: 418 --------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
                         G  ++    +  K     DFD  ++    + +   Y+QYA+AR  S
Sbjct: 443 YSLVDNPTRTAEILGISAIMVQDMSGKRINNYDFDLDRMTSF-EGDTGPYLQYAHARLCS 501

Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           IFR+     D     DF L  ++            + L+  +A++P ++ +A    EP  
Sbjct: 502 IFRKVDFTVDEMLKSDFSLLSQS---------PHAIGLLRVMAQFPDLVNHALKTLEPTT 552

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL+ L       + H R              +++ R  L +    ++ +G+ ++G+ 
Sbjct: 553 ILTYLFKLTHKLSSSYDHLRV-----VEPTEGPAMSLARASLYYGARQVLRNGMVLLGIT 607

Query: 581 SPNE 584
             + 
Sbjct: 608 PIDR 611


>gi|328873579|gb|EGG21946.1| arginyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 730

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 117/648 (18%), Positives = 226/648 (34%), Gaps = 135/648 (20%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD------VDSVFIAGKGFINLYLSPS 96
           G  S +    LSR +   P T+   +   I           ++ V +  K  +NL LS  
Sbjct: 111 GDYSISNVFHLSRAINSKPETVIGQLTTLINDQQTKRDKRLIEKVEVINKH-LNLTLSQQ 169

Query: 97  YLRKILSSIVVSG-------------IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           YL + +    +                    + I    +V ++F S N +  +HVGH R 
Sbjct: 170 YLEECVRLWCLGESSNSSNSSKQVTLDFIATDPIPPRKRVLVDFASPNMSKELHVGHLRS 229

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA----------LSVFWRYQQALYNND 193
             +G+++  ++ + G+EV R  ++ D G  +  +           LS  W       ++ 
Sbjct: 230 IALGESVCRILEYRGHEVERISHVGDFGTPMGMVISHALDEKAPFLSHIWGRAGVESDDS 289

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI---IRDDLK 250
             +P   Y  +      KE+++ Y++       +K   +    +   + K      ++  
Sbjct: 290 PAMPV--YKEMPYIPTPKEMSEYYAAAKQRTKTDKQFEVRAQLTAAELQKGPPNFDNNGN 347

Query: 251 ALNIQHDIFISEDDF---HRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDR 306
                 DI+ +        R   + I  +++ N+  +G  Y   +               
Sbjct: 348 NSGSHPDIYQAWQSICQASREGFNQIFKLMNVNVNERGESYYRTMLEN-----------G 396

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            Q +F +   G+ V   + K DG+Y Y   DLA  K + E G + ++ +     + + + 
Sbjct: 397 AQCIFLN---GNKVPVIIKKRDGAYLYATTDLAAIKSRIESGKEWIVVITDDSQNKHFED 453

Query: 367 LEAVAAAVSEKKAQINV--------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           + ++A      K +            L   V    +G   K+S R G+ + L  +V+E  
Sbjct: 454 IFSIARLAGWLKEEEKHDGDNVRVDHLSFGVVRSENG--SKLSSRDGNPLALSELVEESV 511

Query: 419 SDS----------------------------VRFMMLWRKNSELL--DFDFCKVKEQ--- 445
             +                             R    +  N +    D +   +K Q   
Sbjct: 512 KRAKQASITSKSLSRAETIDPTHTAYRVEEPARVSDTFENNDQDNQDDENVDIMKNQHYL 571

Query: 446 ----------------------------SKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
                                        K N   Y+ Y+  R  +I R+AK      D 
Sbjct: 572 KVGISAIKYYDLVQRSNSYRFSYDNILSFKGNTSIYLNYSLTRIATIMRRAK-TERGFDI 630

Query: 478 DLFPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           +    N+   Q  EF  +E +L+V ++++   +++A     P  +  YL+D+A  FH  +
Sbjct: 631 EEAELNIASFQFQEFTENERRLVVMISKFADTLKSAEGQLRPAIICDYLWDVADTFHRFY 690

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                      V  ++R     RL + + V  I+ +G  ++GVE    
Sbjct: 691 E-------TDTVLGSDR--QHQRLLICNTVKKILETGFYLLGVEPVER 729


>gi|149173496|ref|ZP_01852126.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847678|gb|EDL62011.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 393

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 86/411 (20%), Positives = 165/411 (40%), Gaps = 75/411 (18%)

Query: 211 KELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            ++A +   E  N    + + L +   + + A ++ I++    L+I  D+ + E  +H  
Sbjct: 22  PDIARQARDETANLHAGDAENLALWNQF-LPACLEAIQNVYDRLDIHFDMALGESYYHPM 80

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + D++++L ++G   E       S+      +D           G      + K D
Sbjct: 81  ----LADVVESLKQKGLAKE-------SQGAICVFID-----------GFKAPFIVQKQD 118

Query: 329 GSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G++TY   DLA  K +  E   D ++YV+ S  S + + L A       +  ++  +   
Sbjct: 119 GAFTYATTDLATIKYRAEELKADRVLYVVDSRQSEHFQLLFATVNEWGFQNLELQHVSFG 178

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416
            V L +DG P+K   RAGD + L  ++DE                               
Sbjct: 179 SV-LGKDGKPLK--TRAGDNVGLESLLDESIQRAYAIIAENDDAKPEGSELSEERRQEIA 235

Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             +G   +++  L         FD+ K+   ++ +   Y+QYAYAR   IFR+ +     
Sbjct: 236 EIIGLGGIKYADLKHNRDSDYMFDWDKML-ANRGDTATYMQYAYARVCGIFRKGEIDRVT 294

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           L  +             D +E  L + +  Y   +E+  I   P  L  YL++L+++F  
Sbjct: 295 LRENQSAL------KLQDETERALALQINRYSETLESVAIEARPNYLTNYLFELSNLFST 348

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++          ++A   ++   RL L    A +I+ GL+++G+ +   M
Sbjct: 349 FYNQC------PVLKAEEEQVKSSRLLLCDLTARVIDHGLSLLGIRTCERM 393


>gi|325107026|ref|YP_004268094.1| arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967294|gb|ADY58072.1| Arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 654

 Score =  232 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 130/704 (18%), Positives = 232/704 (32%), Gaps = 169/704 (24%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAM----ILSRP 56
           M +  +   R+   L  I  + +         ++   ++   G    N AM     L + 
Sbjct: 1   MNILHELRRRVVAALTGIASEPENFAN-----LVLPAQNPQFGDYQANCAMPLAKQLGKK 55

Query: 57  LG---------------LDPLTIA-----------ELIVARIKIDPDVDSVFIA---GKG 87
                              P  IA           +++ ++++   + D V +A      
Sbjct: 56  PRDVATEIVEKLDVADLCAPPDIAGPGFINLKLRSDVLASQLEAALNDDRVGVAAVENP- 114

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
             N+ L   +    ++  +  G      +IG      + F+    T   HVG       G
Sbjct: 115 -ENVVLD--FSSPNVAKPMHVG-HLRSTVIGDALYRILSFLGHKVTSDNHVGDW-GTQFG 169

Query: 148 DTLA---SLMAFSGY---------------EVTREYY-------------------INDA 170
             L     L+    Y                   EY+                   +NDA
Sbjct: 170 MILYGYKHLLDKDAYAKEPVAELSRLYRLVNQLSEYHQLVEQLPGLEWKLAETEQAVNDA 229

Query: 171 GA---QINTLALSVFWRYQQALYN-----NDSDLPEGYYPGV-YLKHVG------KELAD 215
            A   Q +  +  VF + +Q +         ++           LK V        ELA 
Sbjct: 230 EAETEQNDKESKRVFKKLKQEMNQLREAVRSAENKISAVNDDPDLKAVALAHPEVHELAR 289

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K  ++L N   E    + +++ + A  + + +  + LNI  D  + E  +       + D
Sbjct: 290 KEIAKLHNGDLENR-KLWEEF-LPACFEAMEEVYQRLNISFDHTLGESYYQPM----LAD 343

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           ++D+L   G  +E                     +F   + G+     + K DG+YTY  
Sbjct: 344 VVDDLKESGLAHES---------------QGAMCVF---IPGNRAPFIVQKQDGAYTYAT 385

Query: 336 ADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DLA  + +  E     ++YV+    S + + L   A      K     +    V + +D
Sbjct: 386 TDLATIQYRATEWEAKKILYVVDKRQSEHFQLLFETAKLWGYNKIDFRHISFGTV-MGKD 444

Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------------VGSDS 421
             P K   R+GD I L  ++DE                                 VG  S
Sbjct: 445 NKPYK--TRSGDIIGLGSLLDEAVSRARTVVDSNDDSKPNGPELSEEERQQIAEIVGIGS 502

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L         FD+ K+   +  +   Y+QYA+AR   IFR+A      +  D   
Sbjct: 503 IKYADLHHNRDSDYVFDWDKMISMT-GDTAAYMQYAFARVCGIFRKAGVTREQMRMDDEC 561

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
              +        +E  L + LA +   + N T+   P  L  YL+D+A+ F   +     
Sbjct: 562 PLQLTH-----PAERALGIQLARFEEALTNVTVEYRPNLLTGYLFDVANAFSSFYDKC-- 614

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                     +  + + R +L    AS I  GL ++G+E+   M
Sbjct: 615 ----PVSAEPSDAIRISRFKLCDLTASTIQRGLELLGIETSPRM 654


>gi|255730453|ref|XP_002550151.1| arginyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240132108|gb|EER31666.1| arginyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 352

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 153/387 (39%), Gaps = 58/387 (14%)

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +   +E+ L I   +   ++ K I D    LNI++D++  E    +     +++      
Sbjct: 1   MEDGDEEALKIWSRFRDLSIDKYI-DTYARLNIKYDVYSGESQVPQ---EKMKEATKMFE 56

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAY 340
            +G +                D+DR   L   T     + + L+ KSDG+  Y   D+  
Sbjct: 57  DKGLI----------------DIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGE 100

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ------------------I 381
              +YE   FD MIYV+ +    +  +   +   +    A+                   
Sbjct: 101 AIKRYETYKFDKMIYVIAAQQDLHCAQFFEILKQMGFDWAKNLEHVNFGMVQGMSTRKGT 160

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFD 438
            V L  +++  ++ M   M K    +  +     + D +G  +V    +  K     +F 
Sbjct: 161 VVFLDNILQETKEKMHEVMQKNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFK 220

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + ++    + +   Y+QYA++R  SI R++     +L+   F       +   +   + L
Sbjct: 221 WDRMTSF-EGDTGPYLQYAHSRLCSIQRKSGISIEELEHANF-------DLLVEPCAVNL 272

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           +  LA+YP +I+ A  + EP  +  YL++L  +    +        + +V    + L + 
Sbjct: 273 VRTLAQYPDIIKRAVNSLEPSTIVTYLFNLTHIVSQCYD-------ILWVAGQEKDLAVA 325

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           RL L  A   ++N+G+ ++G+     M
Sbjct: 326 RLALYEATRQVVNNGMKLLGLTPVERM 352


>gi|295666582|ref|XP_002793841.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226277494|gb|EEH33060.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 618

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 104/573 (18%), Positives = 206/573 (35%), Gaps = 100/573 (17%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI---KIDPDVDSVFIAGKGFIN 90
           I+R +  AHG ++  AA +  R  G +   +A  + +++    +     S  +    FI 
Sbjct: 61  IQRTQVLAHGDVALIAARL--RLKGDNIGQVAAYLSSKLFALPLISCPSSKSV----FIP 114

Query: 91  LYLSPSYLRKILSSIVVS-----------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
           ++ + + L +++   +             G+   +N      KV +EF S N     H G
Sbjct: 115 IHFNETILPRLILPYIFDRRHLYGQDRFTGLRDAKNEAAGRKKVIVEFSSPNIAQEFHAG 174

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R  ++G  +++L    G++V +  Y+ D G Q   LA+       + L+  +   P  
Sbjct: 175 HLRSTIIGAHISNLYGSMGWDVLKINYLGDWGKQFGLLAVGWQKFGSEELFQKE---PLK 231

Query: 200 YYPGVYLKHVGKELADKYSS--------------------------ELLNFPEEKWLPIV 233
           +   VY K       +K +S                          + +   E   L + 
Sbjct: 232 HLLDVYAKINALFNPEKEASKNARENSEDTSEIESKGINAERNAFFKRMEDREPAALRLW 291

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K +   ++ + I      LNI  D +  E       P  +  +   L  +G +YE     
Sbjct: 292 KRFRDISIERYIS-TYARLNIAFDEYSGESTVR---PETVEKVERILKEKG-IYE----- 341

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-GSYTYFAADLAYFKCKYER-GFDN 351
            +++ +   D  +             +D  ++++  G+ TY   D+A    + E+  FD 
Sbjct: 342 -ENQGSWIIDFKKHG--------ARKLDIAIVRNRGGTSTYLLRDIATVLERAEKYEFDK 392

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL------------VRLYRDG---- 395
           MIYV+ ++   Y +R+      +   +    ++                V+L  D     
Sbjct: 393 MIYVVAAEQDTYFQRVFKTVEILGYPEIASKLVHINFGKVQGMTSQLGAVKLLSDILDKC 452

Query: 396 ---MPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              M   M      +  +     V D VG  +V    +  K      FD  ++    +++
Sbjct: 453 GNCMHEVMRANEAKYAQVEDPETVADIVGITAVVAQDMSGKRINNYTFDVTRMTSF-EDD 511

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
              ++QY++AR  SI R+AK    D+    F           +   + ++  +A +P + 
Sbjct: 512 TGPFLQYSHARLCSIMRKAKLTADDVAKADFSL-------LKEPHAIDILRLVARFPDMT 564

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
             A    EP  +  YL+         +   +  
Sbjct: 565 SQAFKTLEPTTVLTYLFRHTHQVSSAYEVVKVL 597


>gi|226287045|gb|EEH42558.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 584

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/602 (17%), Positives = 200/602 (33%), Gaps = 158/602 (26%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           IER +  AHG       +I++R L L   +I + + A +               FI    
Sbjct: 61  IERTQVLAHGD----VVLIVAR-LRLKGDSIGQ-VAAYL---------------FI---- 95

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
                            E  +N      KV +EF S N     H GH R  ++G  +++L
Sbjct: 96  -----------------EDAKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNL 138

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK------ 207
               G++V +  Y+ D G Q   LA+       + L+  +   P+ +   VY K      
Sbjct: 139 YGNMGWDVLKINYLGDWGKQFGLLAVGWQKFGSKELFQKE---PQKHLLDVYAKVNSLFN 195

Query: 208 --HVGKELADKYSSELLNFP------------------EEKWLPIVKDYSVQAMMKIIRD 247
                 + A +   +                       E + L + K +   ++ + I  
Sbjct: 196 PEKEASKNARENGEDTSEIESKGIYAERNAFFKRMEDREPEALRLWKRFRDISIERYIS- 254

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               LNI  D +  E            + ++ L                           
Sbjct: 255 TYARLNIAFDEYSGESAVR-------PETVEKL--------------------------- 280

Query: 308 QLLFRSTMVGDDVDRPLLKSDG-SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365
                        D  ++++ G + TY   D+A    + E+  FD MIYV+ ++ + Y +
Sbjct: 281 -------------DIAIVRNRGGTSTYLLRDIATVLEREEKYEFDKMIYVVAAEQNTYFQ 327

Query: 366 RLEAVAAAVSEKK-----AQINV--------------LLCELVRLYRDGMPIKMSKRAGD 406
           R+      +   +       IN               LL +++    + M   M      
Sbjct: 328 RVFKTVEILGYPEIASKLVHINFGKVQGMTSQLGAVKLLGDILDKCVNYMHEVMRANETK 387

Query: 407 FITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           +  +     V D VG  +V    +  K      FD  ++    +++   ++QY++A   S
Sbjct: 388 YAQVEDPETVADVVGITAVMAQDMSGKRINTCPFDVTRMTSF-EDDTGPFLQYSHAGLCS 446

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+AK    D+    F           +   + ++  +A +P ++  A    EP  +  
Sbjct: 447 IMRKAKLTADDVVKADFSL-------LKEPHAIDILSVVARFPDMVSQAYNTLEPTAILT 499

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           YL+ L             +  ++ + A+   ++ +  L        ++ +G+ ++G    
Sbjct: 500 YLFRLTRQASS------AHEVVKDLGASVGPEVMLAHLAPCEGARQVLENGMRLLGFTPL 553

Query: 583 NE 584
             
Sbjct: 554 ES 555


>gi|226324687|ref|ZP_03800205.1| hypothetical protein COPCOM_02473 [Coprococcus comes ATCC 27758]
 gi|225207135|gb|EEG89489.1| hypothetical protein COPCOM_02473 [Coprococcus comes ATCC 27758]
          Length = 422

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 85/458 (18%), Positives = 167/458 (36%), Gaps = 82/458 (17%)

Query: 174 INTLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           +  +   +  R     Y +D    + P+     +         A  Y+ E  ++ EE   
Sbjct: 1   MGLIITELKKRQPDLPYFDDNFTGEYPKEAPFTISDLEEIYPAASAYAKEHDDYREEALD 60

Query: 231 PIVK----DYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              +        +A+   I        + +   LN++ D++  E D  +     I D+++
Sbjct: 61  ATFQLQSGKRGYRAIWDHIMNVSVTDLKKNYANLNVEFDLWKGESDAQKY----IPDMVE 116

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFA 335
            L ++GY +                +D   L+       D  + P   +LKSDG+  Y  
Sbjct: 117 RLKKEGYAH----------------IDNGALVVDVKEETDTKEIPPCIILKSDGAALYDT 160

Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYR 393
            DLA    + E    + +IYV+      +  ++   A      K    +  L       +
Sbjct: 161 TDLATLVEREELFQPNEVIYVVDKRQELHFVQVFRCAKKTGIVKEDTKLTFLGFGTMNGK 220

Query: 394 DGMPIKMSKRAGDFITLRHVVDE--------------------------VGSDSVRFMML 427
           DG P K   R G  + L +++ E                          VG  ++++  L
Sbjct: 221 DGKPFK--TREGGVMRLENLIREITEKMYEKITENRTVSEEEAKATAKMVGMAAIKYGDL 278

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             + ++   FD  +     + N   Y+ Y   R +SI  + K+    +D        I  
Sbjct: 279 SNQAAKDYVFDVDRFTSF-EGNTGPYILYTIVRIKSILNKYKESGKSMD-------DIKI 330

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            S    SE  L++  A++  V+EN      P+K+  Y+YDLA+ F+  +         + 
Sbjct: 331 LSATSESEKALMLEAAKFGSVMENVYEELAPHKICAYIYDLANAFNRFYH------ETKI 384

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   + +     + L+     I+ + ++++G E+P  M
Sbjct: 385 LAEEDEQKQKSYIALLTLTRDILTTCIDLLGFEAPERM 422


>gi|58697671|ref|ZP_00372842.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58535824|gb|EAL59640.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 221

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 2/223 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +F   SS + + L E+  +  +     + I +E P + AHG + TN AM+L++    +
Sbjct: 1   MNIFKRASSLILSKLNELKQRGIINTDTTNFI-VEPPSNRAHGDIYTNVAMVLAKHEKKN 59

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P+ IAE++    ++  +V  V IAG GFIN++L       IL  I     E+G   IG  
Sbjct: 60  PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             +N+EFVSANPTGP+H+GH R AV GD LA+L+   GY+VT+EYYINDAGAQI+TL  S
Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           V+ RY++AL      + +G YPG YLK +G+ LA KY  E L 
Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLK 221


>gi|198430377|ref|XP_002126846.1| PREDICTED: similar to arginyl-tRNA synthetase 2, mitochondrial
           [Ciona intestinalis]
          Length = 526

 Score =  228 bits (581), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 99/535 (18%), Positives = 188/535 (35%), Gaps = 72/535 (13%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            G  NL      L  I       G            K+ I+F S N     HVGH R  V
Sbjct: 29  PGNQNLIDHGQTLANIYLLKSRYGFHSPYFDKQLKQKIVIDFSSPNIAKTFHVGHYRSTV 88

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           +G+ +++++  +G+EV R  Y+ D G Q   +AL         L   D   P  +   VY
Sbjct: 89  IGNFISNILKAAGHEVCRINYLGDWGLQFALIALGFQKYGCHTLLRKD---PLTHLFDVY 145

Query: 206 LK-----HVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
           +K         ++ ++ ++  L     +K +    D   +  +K  R     +NI  D +
Sbjct: 146 VKISSESKNNPDVLEEANTIFLKMENNDKKVMEFWDLIRKVSLKEYRKLYDKINISFDEY 205

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E ++        + II NL +   +                D+        +T    +
Sbjct: 206 NGESEY----RDKAKWIISNLQQASLL-------TNVNGKICMDLSNSD-WLDNT---PN 250

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
               L +++G+  Y + D+A    +++   FD  IY+   +   + ++L A+   +  K 
Sbjct: 251 HTATLARANGTTVYLSRDVAAAIHRHDVHKFDRSIYITDENQRFHFQQLFAILDKMGYKW 310

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD--------SVRFMMLWRK 430
           A+        +     G   KM  R G+ +    ++DE              R   +  +
Sbjct: 311 AR---RSEGRLVHKTFGRISKMQTRKGEVVFFTDILDEAMEKLKTDRQQHGTRKRDIKNE 367

Query: 431 NS--------------------ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           N                     +   F +  V   SK     ++QY + R  S+      
Sbjct: 368 NEVVKLLALSGLLCHDFKAKLHKGYAFSWTAVLS-SKGFTGLFLQYTHCRLCSLEENCGV 426

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                       NV+ Q  +     + +I HL+ Y  V++ A ++ EP  +  YL+ L+ 
Sbjct: 427 PL----VSCIDINVLEQYQDM----VNIIQHLSCYSEVVKAAYVSLEPSYVLKYLFHLSH 478

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +        +         A+++      L   H     + +G+ ++G+    +M
Sbjct: 479 L------TAKGLKSCNIKGASSKD-AETLLFSFHCAKINLANGMQLLGITPLKKM 526


>gi|257076127|ref|ZP_05570488.1| arginyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 542

 Score =  227 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 125/619 (20%), Positives = 241/619 (38%), Gaps = 113/619 (18%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-L 59
           M LF D+   + + +K I      + ++              G  +        +     
Sbjct: 1   MLLFDDYKKIMLDKIKTIYSVQDNDMELG----------TNFGDFTL-------KIFKFK 43

Query: 60  DPLTIAELIVARIKIDPDVD---SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
           D     E + +RIK   D++    V + G  +IN Y+  S +   + + + +  +Y  N 
Sbjct: 44  DNR---EEVYSRIKSSMDMEFIDRVELQGN-YINFYIKSSKMLDTVENSIGTFGKYP-NT 98

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
               +K  IE  S+NPTGP+HVG  R +++GD++  ++   G     +Y++ND+G Q+  
Sbjct: 99  FQDTSKALIEHTSSNPTGPIHVGRIRNSIIGDSIFRIIERYGTRSLTQYFVNDSGKQV-- 156

Query: 177 LALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             +S++  + +   + +   +     Y  +Y          +   EL    E     ++K
Sbjct: 157 --ISLYLGHIKYHKDEEMTVENLLDGYQKIYTNIDSDPDIKREVQELDEKYETGDNELIK 214

Query: 235 DYSVQA--MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +    A  ++K I D L  L I    ++ E +F       +  +ID+L+           
Sbjct: 215 EIQNTASIVLKSITDSLAKLGIHISTYVWESNF--IMYGNVAQLIDSLSE---------- 262

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
             KS+   K      + +F            L + DG+  YFA DL Y   K E  FD +
Sbjct: 263 DLKSEGKAKYIEIGDKKIF------------LTRQDGTSLYFARDLVYHMFKSE-NFDWI 309

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I V+G DH  + K L+ V     +  ++I+ L    V L       KMS R G+ +T+  
Sbjct: 310 IDVLGEDHKDHAKNLDYVLHNYLDFPSRIDYLFYGFVSLDTG----KMSTRKGNIVTVND 365

Query: 413 VVD---------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           + +                            + + S+R+ ++    ++ L F + +    
Sbjct: 366 LYEKTVEESAAIIKQKRPEYSKEEVDKISNAIAASSIRYNIIKINANKPLTFRWDEALNF 425

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + +   Y+ YAYAR  S+  +  +     +             E++  E  LI  +  Y
Sbjct: 426 -EGDSAPYIMYAYARACSLISKTGNTESSTE-------------EYNEFEKALIKAMYVY 471

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  ++N+        +A Y+  L   F+  + +         +  N+ +   MR+  V A
Sbjct: 472 PYYLQNSVDFLRADIIAGYILYLVKSFNEFYLNC-------PIIGNSEENKRMRI--VRA 522

Query: 566 VASIINSGLNIIGVESPNE 584
              I+    +++G++   +
Sbjct: 523 FKKIMEDSADLLGIQLLEK 541


>gi|116624961|ref|YP_827117.1| arginyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228123|gb|ABJ86832.1| arginyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 642

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 116/670 (17%), Positives = 223/670 (33%), Gaps = 120/670 (17%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F S  K         I+    +   + IE+PR    G ++  AA  L++ L   P  IA 
Sbjct: 2   FHSIEKQVASAFHAHIQARYGVDLAVSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIAA 61

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +V  I     V S+ +AG G+IN+ L        L S             G G K+ +E
Sbjct: 62  ELVDEIGPIAGVASLEVAGNGYINIRLDRGAYAAALVSGAG------EAAAGSGGKIIVE 115

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + NP    H+GH R A +GDT   ++   G +V  + YI++ G Q+  + +   +  +
Sbjct: 116 HTNINPNKAAHIGHLRNATLGDTFVRMLRAGGKQVEVQNYIDNTGVQVADVVVGFHYLEK 175

Query: 187 QALYN-----NDSDLPEGYY-------PGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           ++  +      D  +   YY          Y K   + L  + ++       E  +  + 
Sbjct: 176 KSPADVRALLGDPAVRFDYYCWDLYARTSSYYKDNAEALKWRSATLHAIEAGEGEVAELA 235

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                A++K     +  L++++D+   E +             + L  +  +Y       
Sbjct: 236 HLVADAIVKAHLKTMLRLDVEYDVLPRESEILHLKFWA--SAFELLKERKAIYFETEGKN 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY--------- 345
                     +  +               +++SDG+ TY   D+AY   K+         
Sbjct: 294 SGCWVMPGLSEEGK--------------VIVRSDGTVTYVGKDIAYQLWKFGLLGKDFFY 339

Query: 346 ----------------ERGFD---------NMIYVMGSDHSGYVKRLEAVAAAVSEKK-- 378
                           +   D          +  V+ +  S     + A   A+   +  
Sbjct: 340 RPFQTYADGRVLWVTTDEPADAGHQFGHGTQVFNVIDARQSYLQDVVVAGLRALGYGEQA 399

Query: 379 AQINVLLCELVRLY---------------RDGMPIKMSKRAGDFITLRHVVD-------- 415
            Q      E+V L                R    +++S R G  +    ++D        
Sbjct: 400 DQSIHFNYEMVALSPRCCADLGIPLSEEDRKRPYVEVSGRKGLGVKADDLMDSLIAKALE 459

Query: 416 -------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                              ++   ++R+ +L    + ++ FD  +      E    Y+QY
Sbjct: 460 EVVSRHPDDDAAANRQVATQIAIAALRYFLLKYTRNTVIAFDLQEALSFVGE-TGPYLQY 518

Query: 457 AYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
              R   +  +  +   +L DF                   Q+++  ++    +ENA  A
Sbjct: 519 IAVRAGRVLSKLTERGEELPDFTKELGAEAMARQMATEDFWQMLLAASKADSALENAISA 578

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
            EP  +A Y Y LA  F   +       +   +   NR+  +  L +       +    +
Sbjct: 579 GEPAHMARYGYQLAQAFSNFYE------KYPILNEENREKKVFLLWMTDFFRRQLERTAD 632

Query: 576 IIGVESPNEM 585
           ++G++ P  M
Sbjct: 633 VLGIQIPAYM 642


>gi|221632568|ref|YP_002521789.1| arginyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156547|gb|ACM05674.1| arginyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 716

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 156/404 (38%), Gaps = 65/404 (16%)

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E   + + +     + +++ + ++    +M +  R   + L++  D++  E +     
Sbjct: 350 EWEREVRETFQRWERKDPEFVRLWEETRAWSMEEFYRI-YEELDVHFDVWFFESEVEEEG 408

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +R++++    +            S       +D K  L + T        P+L+SDG
Sbjct: 409 RQIVRELLERGIAE-----------ISDGLPVVKIDEKLGLEKET----YRTLPILRSDG 453

Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  Y   DLA  K K+E    D  I+V+    + Y++++  V      ++A     L   
Sbjct: 454 TTLYSTKDLALTKRKFEQYHVDRAIWVVDVRQTLYLQQIFKVMELWGFQQAAKCYHLAYE 513

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEV---------------------------GSDS 421
             +   G    MS R G+ +    V  +V                           G  S
Sbjct: 514 TVMLPSGA---MSSRLGNVVLYEDVARQVLERALEIIEEKNPTLPPEVKASVARQVGLGS 570

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++ ML R N+ ++ FD  +     + +   Y+QYA+AR   I  +          D  P
Sbjct: 571 LKYGMLSRDNNRVIVFDIEEALSF-EGHAAPYIQYAHARACRILEK---------VDTLP 620

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                 ++     E+ LI  +A +P  ++ A    +P  +A Y+Y+LA  F+  +   R 
Sbjct: 621 EGPYALDALT-REEIDLIEQIALFPDEVQRAADEYKPLVIANYVYELAKRFNEFY---RV 676

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            P L+            RL +V A    + +GL ++G+ +P  M
Sbjct: 677 CPVLQ----APEPQRSARLAIVAAARQTLANGLQLLGIAAPEVM 716



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 40/253 (15%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68
            +L   L+ +     + KK   R+V ER R+ A                      IAE +
Sbjct: 51  EQLAEELERVAA--GLSKKEAKRLVQERVRERA--------------------QAIAEEL 88

Query: 69  VARIKIDPDVDSVFIAGKGFINL-YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
             R+        V  A  G++N+ Y S  +   +L +++  G E+GR    +G +V +E+
Sbjct: 89  ARRLSRHTGFARVE-AINGYLNIVYDSNRFANDVLRTVLAEGSEFGRGEA-RGERVMVEY 146

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
              N     HVGH R   +G+ L+ ++ F+G++V    YI D G  +    +   W Y +
Sbjct: 147 SQPNTHKAFHVGHLRNVCLGNALSRVLRFAGFDVLEANYIGDIGLHV----IKCLWCYLR 202

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                +   P     G +L  +  E   +  Y  +++    E           QA ++ I
Sbjct: 203 FHQGEE---PPRERRGRWLGEIYAEADRRLSYRQDVIELLNELARED------QAFVQAI 253

Query: 246 RDDLKALNIQHDI 258
              LK L  +H +
Sbjct: 254 DRMLKELWQEHKV 266


>gi|298242069|ref|ZP_06965876.1| Arginine--tRNA ligase [Ktedonobacter racemifer DSM 44963]
 gi|297555123|gb|EFH88987.1| Arginine--tRNA ligase [Ktedonobacter racemifer DSM 44963]
          Length = 682

 Score =  225 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 126/712 (17%), Positives = 237/712 (33%), Gaps = 172/712 (24%)

Query: 6   DFSSRLKNYLKEIDCK------IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           D  + L   +K           I  + K L  I +      + G  S      +   LG 
Sbjct: 9   DLHAYLTALIKRAAAAYIEREGIAYDAKQLP-IDLRFSAQSSFGDYSIPVMPWVKNKLGR 67

Query: 60  DPLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNL 116
            PL IAE +   I     P++++V     GF+N  L+ +   R I+  ++  G ++G+N 
Sbjct: 68  PPLQIAEALATYINELHVPELENVNATKPGFVNFRLNRAGVGRSIIERVLEEGPDFGQNE 127

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN- 175
           +G   ++ +E  + N     HVGH R + +GDT+  ++   GY V  E YI+D+G Q+  
Sbjct: 128 VGLNQRIIVEHTAINTNKAAHVGHLRNSCLGDTVVRMLRSQGYHVEAENYIDDSGVQVAD 187

Query: 176 -TLALSVFWRYQQALYNNDSDLPE--------GYYPGVYLKHVGKELAD----------- 215
             + + +  + +  L   +   P+          Y  V   +  KE              
Sbjct: 188 VVVGMLLLQKGELQLAEGNEQHPDESFDYYCSRIYVAVNRLYEQKESERGIAAIQLRRQV 247

Query: 216 ----KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               ++  E    P+  +  +  D S Q +   ++  +  LNI +D+   E    +    
Sbjct: 248 LHSIEHGDEPEAGPD--YPAMAADLSHQIVQAHLK-TMGRLNISYDLLTWESAILQ--AG 302

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTT---QKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             +   D L +   + +    P            + D +++           D+ L++SD
Sbjct: 303 LWQHTFDFLRKHNLLEKPETGPAAGCWILPFGDGESDGERM----------SDKILVRSD 352

Query: 329 GSYTYFAADLAYFKCKYER----------------------------------------- 347
           G+ TY A D+A    K+                                           
Sbjct: 353 GTATYTAKDIANQLWKFGLTDDPEFNVQFHFVPWGTQHDGRQLWTMRTPKDAFHPEQESD 412

Query: 348 -----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYR------- 393
                   +++ V+    S   + +      +   +       L  E+V L         
Sbjct: 413 PKRFGHAQHVVNVIDVRQSYPQQVVYESLRRLGYTEQAENSKHLGYEVVTLSAATAASLG 472

Query: 394 ----DGMPI-KMSKRAGDFITLRHVVD------------------------EVGSDSVRF 424
               DG     MS R G  I    +++                         + + ++R+
Sbjct: 473 IDTSDGRDFYAMSGRKGIEIKADDLINTAEQRMREVRHQDERPEIDEKTASVLAASAIRY 532

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            M+     +++  D  +V  +   +   Y+QY+YAR  SI R+ +     +     P  +
Sbjct: 533 FMIRFNLQQIITLDIDEVL-RPNGDTGVYLQYSYARSNSILRRLQASGYTI-----PTRL 586

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQ------------EPYKLAFYLYDLASVF 532
                + + SE +L+ H+  YPR +  A                  +             
Sbjct: 587 NGLPEQLEQSEWELLRHIDAYPRRLAEAAEQMSASALAAYAYDLAAHI------------ 634

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              + H         V+  N ++   R  LV A    +N+ L I+G E    
Sbjct: 635 SDFYEHTP-----PIVKEENEQMKAFRALLVQATVQTMNNVLRILGFEPLER 681


>gi|299144758|ref|ZP_07037826.1| arginine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515249|gb|EFI39130.1| arginine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 694

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 150/402 (37%), Gaps = 68/402 (16%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           + + E+L   E     +   + +          +  K + +  D    E + +       
Sbjct: 329 QEAREMLVKWEAGDPEVRGLWEMMNNWVYAGFDETYKKMGVSFDKIYYESNTYLEG---- 384

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           ++ +     +G+ Y+                +   +    T  G D  + LL+ DG+  Y
Sbjct: 385 KEKVMEGLEKGFFYKK---------------EDGSVWADLTAEGLD-HKLLLRGDGTSVY 428

Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D+   K ++ +   + MIYV+G++ + + + L  +   +  +  +  V     +   
Sbjct: 429 MTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVEL 488

Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423
            +G   KM  R G  +    +++E                             VG  +++
Sbjct: 489 PEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALK 545

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L     + + F+  K       N   ++QY YAR +S+ R+A +    +        
Sbjct: 546 YFILKVDARKNMTFNP-KESIDFNGNTGPFIQYTYARIQSVLRKAAESGIVI------PE 598

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            IP   E    E  LI  +A++  V++ A     P  +A Y YDL   ++  +       
Sbjct: 599 QIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEYNQFYHD----- 653

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++  N  + + R+ L   VA ++  G+N++G+E P+ M
Sbjct: 654 -YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVPSRM 694



 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 8/255 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     + + + LK +    +V +K+   + +++ +    GHL T       +     
Sbjct: 1   MKIEDKLVASVISGLKAL-YGQEVPEKM---VQLQKTKKEFEGHL-TLVVFPFLKMSKKG 55

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ I   +K +    + F   KGF+NL ++ +   ++L+ I               
Sbjct: 56  PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADEQYGLVKATETS 115

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V IE+ S N   P+H+GH R  ++G+ LA+++A +G +V +   +ND G  I    L+
Sbjct: 116 PLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSMLA 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            + +Y        S     +  G Y      +L ++ ++  ++   ++   I+ D +++ 
Sbjct: 176 -WKKYGNGETPETSGKKGDHLVGDYYVIFNNKLKEEINTICISESWDELPDIIAD-NIKN 233

Query: 241 MMKIIRDDLKALNIQ 255
            +++I +D K   I+
Sbjct: 234 NLRLI-EDYKNRLIE 247


>gi|300706233|ref|XP_002995404.1| hypothetical protein NCER_101716 [Nosema ceranae BRL01]
 gi|239604486|gb|EEQ81733.1| hypothetical protein NCER_101716 [Nosema ceranae BRL01]
          Length = 561

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/534 (19%), Positives = 200/534 (37%), Gaps = 92/534 (17%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+ L P Y  +IL++I+  G ++GRN IG G  V I++ S N     H+GH R  ++G+ 
Sbjct: 82  NINLIP-YSYEILTTILEKGEDFGRNNIGNGETVVIDYSSPNIAKIFHMGHFRTTILGNF 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLAL-SVFWRYQQALYNNDSDLPEGYYPGVYLK- 207
           +  + AF GY+     Y+ D G Q   + L S  +   + L  +    P  Y   VY++ 
Sbjct: 141 VKKIHAFCGYKAVGINYLGDWGKQFGLVLLGSQRFSNPEELKTD----PIKYLFNVYVQI 196

Query: 208 -------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
                        A K   ++    +   L     +   ++ K  ++    L ++ + + 
Sbjct: 197 SQAKATDPSVDVEAKKIFEKMEKGTDSSLLDKWSHFRELSINKY-KELYSKLGVEFEEYS 255

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E  + +     I+                     S  +   D+            G + 
Sbjct: 256 GESFYEKTCQDDIKKC-------------NFLIKNSDGSVCLDL------------GKEK 290

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           +  ++KSDG+  Y   D +  K +  R     +IYV+ S+   + + L A          
Sbjct: 291 NPLVIKSDGTSLYLTRDFSAAKDRIARYNPKKLIYVVSSEQKEHFEDLFATLRKA----- 345

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416
                + + +   + GM   MS R G    L  ++D                        
Sbjct: 346 ----EIFDNLEHVQYGMVSGMSTRKGTVKFLEDIIDIATDVMMKQIDANPEKKAQIKDVS 401

Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
                +   ++  M    K  +   FD  K +  + +    Y+QYA+ R +SI    KDI
Sbjct: 402 ATALNLAVSTLIIMDFSAKRIKGYKFDVEK-RAMNTKGTGIYIQYAHCRLKSIEDMNKDI 460

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             + D  +  + +  +E       L L+     + +V+ ++    EP KL  Y+ +L  +
Sbjct: 461 DLNKDIKIDSKCLEQEEI------LNLLYQFIWFEKVVISSFKDNEPNKLFTYVSNLCWL 514

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +  ++   +      V+     +   RLQ++     II + L + G+   N+M
Sbjct: 515 TNS-YNSSLK------VKGEEPSVAKTRLQVLKCARLIIGTTLKLFGLTPLNKM 561


>gi|167044615|gb|ABZ09287.1| putative DALR anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG7F19]
          Length = 543

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 93/560 (16%), Positives = 189/560 (33%), Gaps = 122/560 (21%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
              YG   IGK +K+ +E  S NP   +H+GH R   +GD ++ +++ + Y+V    YI+
Sbjct: 23  KENYGSIDIGKNSKLVVEHTSVNPNKALHIGHLRNVAIGDAVSRILSKANYDVKVLNYID 82

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY-----------LKHVGKELADKY 217
           D+G Q+  + +   +           D P+G     Y                K+L  + 
Sbjct: 83  DSGLQVADIIVGFKYG------GFSEDPPDGKKFANYCGDTVYVSITSKYESDKDLESRR 136

Query: 218 SSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              L    +             + ++    D +  L   +D    E +           I
Sbjct: 137 HEILKELEDSTSETAKFGKTLTRKILSDQLDTVWNLGASYDCLNFESEI--LYSKLWEKI 194

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            + +  +  V+               + +               D+ +++S+G  TY A 
Sbjct: 195 FERMKSENLVHLEDQGDNVGCWVLPIENED--------------DKIIVRSNGVTTYVAK 240

Query: 337 DLAYFKCK----------------------YER------------GFDNMIYVMGSDHSG 362
           D+ Y   K                      YE               + +I V+ +  + 
Sbjct: 241 DIPYAAWKLGVLNDPFNYAKYTTQSNGRILYETTLEKTQEPKQSFAANKVITVIDNRQTN 300

Query: 363 YVK---------RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
             K         + E+    +  +   ++    +++    DG  ++MS R G +I    +
Sbjct: 301 LQKIVTNLMSKFKPESSYVHLGYEAVTLSSETAKILGNKTDGKSVQMSGRKGLYINADEI 360

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++                           V   ++R+ ++     +++ FD     +  
Sbjct: 361 IEKLEKRIFLESKERNEDLDNASLCEIAHNVAVGTIRYELIKPDLGKIITFDINTSLKLD 420

Query: 447 KENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
             +   Y+QY+  R   I  ++  +   D+ FD                E  LI  +  +
Sbjct: 421 -GDTCSYIQYSCVRALRILEKSGNEPNFDVQFDQLNT----------EYETSLIKQIGLF 469

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              + +A     P  +A Y YDLA  F   + H      ++ ++A   +L   RL LV +
Sbjct: 470 EVFVNDAAKNYSPKVIAKYCYDLAVAFSSFYEH------VKVLKAETPELINARLCLVLS 523

Query: 566 VASIINSGLNIIGVESPNEM 585
               +   L+++G+ +P  M
Sbjct: 524 FKLTLEKALDLLGITAPQRM 543


>gi|70952033|ref|XP_745212.1| arginyl-tRNA synthetase [Plasmodium chabaudi chabaudi]
 gi|56525464|emb|CAH75311.1| arginyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 523

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/527 (18%), Positives = 184/527 (34%), Gaps = 96/527 (18%)

Query: 39  DCAHGHLSTNAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +   GH   N A+ + +  G      +   I+  I+  I  +   + +  + +GFI + +
Sbjct: 36  NMKFGHFQCNNAINIFKKYGKELNFENAHKISLSIIENIN-ETLFEDINASPQGFITVKI 94

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG--------KGTKVNIEFVSANPTGPMHVGHCRCAV 145
           S SY+ K L  +  +        +         K   V I+F S N    MHVGH R  +
Sbjct: 95  SRSYIEKSLLKLYENNKINISVDMNEINDGNDAKFENVLIDFSSPNIAKEMHVGHLRSTI 154

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----GY 200
           +GDT++ +  F   +  R  ++ D G Q   +   V   Y     N   ++PE       
Sbjct: 155 LGDTISKVFEFLKVKTHRVNHVGDWGTQFGMIINYVVTNYP----NYKEEMPELTNLTLL 210

Query: 201 YPGV---YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y      Y      E+  K  +  L   +E    I      +A  K      K L+I+ D
Sbjct: 211 YQEAKKCYDNDKNFEIKSKEYAIKLQEHDEDCRYIWTKI-CEASKKEFNKIYKILDIKLD 269

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E  +       I   +  L  +  +                      L ++S    
Sbjct: 270 -YFGESFY----VPKIPSTLQILKDKNILTNI----------------GDALCYQSEKY- 307

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
             V   L KS+G Y Y + D+A    + +    D++IYV  +    + + L  +   +  
Sbjct: 308 -PVPLFLQKSNGGYGYDSTDIASLYYRLKVLNVDSIIYVTDNGQLSHFETLFELCRKLGW 366

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
               + ++      L  +    K   R+G  I L ++++E                    
Sbjct: 367 VNDDVKLIHVGFG-LVLNADNKKFKTRSGTNIKLINLINEGTERAKNDLMERIKLKSDAE 425

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          +   ++++  + +  +    F +  +    K N   Y+ Y Y+R 
Sbjct: 426 KSYFEGIDLDQLSQDICVSAIKYFDIKQHRNTDYKFSYENMLS-IKGNTGLYIIYGYSRI 484

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
            SIFR+++    +L  D             +  E+ L +H+ ++P V
Sbjct: 485 CSIFRKSEINIEELVPDEL--------KLTNQYEINLGLHILKFPDV 523


>gi|331009578|gb|EGH89634.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 318

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/332 (21%), Positives = 132/332 (39%), Gaps = 20/332 (6%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             + N    MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + +
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEK 181

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A  +  SDL E +Y            A +   E   F E     +VK  +  A    + 
Sbjct: 182 PATSDELSDL-ENFYRA----------AKQRFDESEEFAERARGLVVKLQAGDAECLALW 230

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K +++ H      + + R +       +   +        ++   K+          
Sbjct: 231 TRFKDISLSHCQ----ETYERLNVKLTPADVMGESAYNDDLANVVNDLKATGLLVESNGA 286

Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAA 336
           + +        DD   P++  K+ G Y Y   
Sbjct: 287 QCVFLEEFRTADDTPLPVIVQKAGGGYLYATT 318


>gi|290977172|ref|XP_002671312.1| predicted protein [Naegleria gruberi]
 gi|284084880|gb|EFC38568.1| predicted protein [Naegleria gruberi]
          Length = 517

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 106/531 (19%), Positives = 198/531 (37%), Gaps = 97/531 (18%)

Query: 51  MILSRPLGLDPLTIAELIVAR-IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           M L   L   P+ +A+ +    +     V+ + I   G I+L L   Y+++ +S I    
Sbjct: 1   MQLGNQLKQSPIDVAKSLGESILNNSEIVEKIDIINNGVISLSLCDEYVKRKISEIFNQQ 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG-YEVTREYYIN 168
               ++ I    +V ++F S N    MHVGH R  ++GD +  ++ + G +EV R  ++ 
Sbjct: 61  PLNVKDKI----RVIVDFSSPNMAKRMHVGHLRSTIIGDCICRILEYDGRFEVERINHVG 116

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D G Q   L L+   R    L    +  P              E  +KY  +     +  
Sbjct: 117 DFGTQFGML-LAFIERNSIDLEKLQTQNP----------PEQLETVEKYYKDSKKLFDSD 165

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY 287
             P+ KD + Q ++ + + + +++   H I+    +  R +   I + +D  L  +G  Y
Sbjct: 166 --PLFKDLAHQKVIALQQGNDESI---HKIWKYLLECSRYEFDSIYERLDVRLVEKGESY 220

Query: 288 EGILPPPKSKTTQKC--DMDRKQLLF----RSTMVGDDVDRPL--LKSDGSYTYFAADLA 339
                P   +       + +  + +F    + T+  D  + PL   K+DG YTY   DLA
Sbjct: 221 YRDFIPKTLEILNPLIQESNGAKCIFTEKEQETITEDQKEPPLMVQKADGGYTYDTTDLA 280

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE---------------------K 377
               + +      +IYV     + +  ++  V   +                        
Sbjct: 281 TLWYRLFVSKGKWLIYVTDFGQASHFNKVFKVGEMMKWIDPLENSRDLVWSENATSLTSS 340

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
           K +I+ +   +V    D    K   R+GD + L  ++DE                     
Sbjct: 341 KVRIDHVGFGVV---LDEEKKKFRTRSGDTVKLHDLLDEAIKRSYEIIKLKNDERCKENE 397

Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                           VG  +V++  L    +    F F K+ +  + N   Y+ YAYAR
Sbjct: 398 EISSLTDEQIMAASKIVGYGAVKYADLRTNRTTNYTFSFDKMLDF-RGNTAVYLLYAYAR 456

Query: 461 CRSIFRQAKDIFPDLDF-DLFPRNVIPQESEF--DTSELQLIVHLAEYPRV 508
             SI  ++ +     ++ D   +  +   +      SE +L + + E+  V
Sbjct: 457 ISSIIEKSGERELMKEYKDQVAKGDLSLFTNLKQSESEWRLALKIIEFKDV 507


>gi|322697668|gb|EFY89445.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 607

 Score =  220 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 91/582 (15%), Positives = 178/582 (30%), Gaps = 121/582 (20%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-- 120
            +A  +      +  +     A    +  +L+P  L  ++   V    E     +  G  
Sbjct: 74  DLAVELATSFPENHPMLQNPTASGVHLPFFLTPKPLSHLILPCVFERREAYGRDLTLGLD 133

Query: 121 ---------TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
                     KV IEF S N     H GH R  ++                   Y+ D G
Sbjct: 134 ASMAGGERRKKVVIEFSSPNIAKEFHAGHLRSTII-----------------VNYLGDWG 176

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---------- 221
            Q   LA+       + L + +   P  +  GVY +   +   ++  S+           
Sbjct: 177 KQFGLLAVGWQRFGSEELLSRE---PLKHLLGVYAQINAEFKLEEEESKRARAEGRDTSE 233

Query: 222 ----------------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                           +   +   + + + +   ++ + I      L I  D +  E   
Sbjct: 234 IESRGLYAERNGYFRRMEKGDADAIALWRRFRDISIDRYI-ATYARLGIDFDKYSGESQV 292

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                + +      L   G VY+        +      +D ++  F+           + 
Sbjct: 293 ---KSATVDAAESALKESG-VYK--------EHDGSWIIDFEKYGFKGLGTA-----VVR 335

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINV 383
              GS TY   D                 V+  +   Y KR+      +   +   ++  
Sbjct: 336 GRTGSTTYLLRD-----------------VVSCEQDLYFKRVFRTLELMGRSDLAGRLQH 378

Query: 384 -----------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVR 423
                            LL +++   RD M   M +    +  +     V + VG  +V 
Sbjct: 379 INFGKVLGMSPRLGNVQLLGDILDQSRDAMHDVMRRNTTKYAQVEDPVSVAESVGISAVM 438

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
              +  K      FD  ++    ++    Y+QY++AR  SI R+A     ++        
Sbjct: 439 VQDMSGKRINNYPFDITRMTSFERD-TGPYLQYSHARVNSILRKAGLSRQEVAEHCLRSP 497

Query: 484 VIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
              +E   D    + L+  +A+YP V   A    EP  +  YL+ L       +   +  
Sbjct: 498 TSLEEHFSDTPHCVNLLRLIAQYPDVTVAALRNLEPSTILTYLFRLTHQLSSCYDVVQVT 557

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                     R + + R  L      ++ +G+ ++G+   + 
Sbjct: 558 GT-----NEGRDVMLSRAGLYEGARQVLENGMRLLGLIPVDR 594


>gi|296816723|ref|XP_002848698.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839151|gb|EEQ28813.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 591

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 106/598 (17%), Positives = 193/598 (32%), Gaps = 131/598 (21%)

Query: 46  STNAAMILS----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101
           +TNA ++L     +  G+D   +A+ +V++    P +    +A   FI +  SP  L  +
Sbjct: 67  ATNADLMLVTARLKLKGVDLKQLAQDLVSKFPPMPLLRQP-VANGIFIPISFSPDTLPSL 125

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +   +        +    G K + +  +                                
Sbjct: 126 ILPFIFDRRASYGSNRLLGLKDSKDEGA-------------------------------- 153

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            +  Y+ D G Q   LA+       + L+  +   P  +   VY K       +K +SE 
Sbjct: 154 VKLNYLGDWGKQFGLLAVGWERFGSEELFAKE---PLKHLLDVYAKINALFAPEKEASEK 210

Query: 222 LNFPEE---------------KWLPIVKDYSVQA--MMKIIRD--------DLKALNIQH 256
                E                +   ++D    A  + K  R+            LNI+ 
Sbjct: 211 ARDNGEDTSEIESKGLFAERNAFFQKMEDGDPDAISLWKRFREVSIERYISTYARLNIKF 270

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++  E       P  ++     L +QG   E                    ++   T  
Sbjct: 271 DVYSGESTV---KPQTVQKAESLLKQQGIYTEDNGSWIIDFKKHGAPNLGVAVVRTRTGT 327

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                          TY   D+A    + E+  FD MIYV+ ++   Y +RL      + 
Sbjct: 328 --------------TTYLLRDIAAVLERVEKYKFDKMIYVVSTEQDLYFQRLFKTIELMG 373

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416
             +          +     G    MS R G    L  ++DE                   
Sbjct: 374 HPEV------SSKLEHINFGKVQGMSSRLGTVKLLGDILDECGSAMHDVMRKNPSKYDQV 427

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +G  +V    +  K      FD  K+    + +   Y+QYA+AR  SI R+
Sbjct: 428 ENPTWVADVLGITAVMVQDMAGKRIHNYPFDIAKMTSF-EGDTGPYLQYAHARLCSIVRK 486

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                  ++ DL            +T  + ++  + +YP V  NA    EP  +  YL+ 
Sbjct: 487 -------VNIDLKDITAADFSLLKETHAISILRLMTQYPEVTNNALKTLEPTTILTYLFR 539

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           LA      +        ++ + A + ++T+ RL L      ++ +G+ ++G      M
Sbjct: 540 LAHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENGMRLLGFTPVERM 591


>gi|303243691|ref|ZP_07330032.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
 gi|302485933|gb|EFL48856.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
          Length = 358

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 81/394 (20%), Positives = 160/394 (40%), Gaps = 64/394 (16%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +LL   EE  +    +Y+V   +   ++ LK LNI+HD F+ E  + +     ++++I 
Sbjct: 2   RKLLKKNEENEITKKFEYAVNYALSGFKETLKNLNIKHDKFVWESSYVKN--GMVKEVIK 59

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L   G V                    +      +  G +    L + +G+  Y   D+
Sbjct: 60  RLMETGKV-----------------EKDEVYRLNLSDFGIEKKLVLARLNGTSLYSTRDI 102

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           AY   K +   D  I ++G+DH    + + A    +        ++  E + L       
Sbjct: 103 AYHIDKMK-NCDIGINILGADHKLTAEMVNASLKLLGYNTP--EIVFYEFISLPEG---- 155

Query: 399 KMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKN 431
            MS R G FI++  + +E                           + + +VR+ ++    
Sbjct: 156 SMSTRRGRFISIDELFEEAKRRAIDEVKKRGVATDKDEINEIAHKIATGAVRYNIVRISP 215

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            + + F + +  +  K      +QYA+ARC  I    ++ + + + +           E 
Sbjct: 216 EKPMVFRWDEALDFEKVGC-PVIQYAHARCCRILENKENNYNEKNINFNEL----FNYEL 270

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             +E  LI  L ++P ++E +  A++P  +A Y+ D+A  F+  + +         ++  
Sbjct: 271 IDNEKILIKTLLKFPNIVEKSANARKPQIVAIYMLDVAQAFNRFYGNC------PILKEE 324

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N+ +   RL+LV     +I +GLNI+G+E P +M
Sbjct: 325 NQNIVYSRLKLVECTKIVIENGLNILGIECPGKM 358


>gi|126291425|ref|XP_001380293.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 358

 Score =  217 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 143/376 (38%), Gaps = 61/376 (16%)

Query: 243 KIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                + + +    DI + E    F++     + DI+     +G+V              
Sbjct: 11  WHCDSEFQKIYDALDISLIERGESFYQ---DRMTDIVKEFEEKGFVQVD----------- 56

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359
               D ++++F   +    V   ++KSDG YTY  +DLA  K +  E   D +IYV+ S 
Sbjct: 57  ----DGRKIVF---VPESSVPLTIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVDSG 109

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416
            + + + +   A  +     ++  +      +       K   R+GD + L  +++E   
Sbjct: 110 QAVHFQAIFVAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLK 169

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     V    +R+  L         F F K+ +  + N 
Sbjct: 170 RSMDKLKEKERDKVLTPEELKAAQTSVAFGCIRYADLSHNRMNDYIFSFDKMLD-DRGNT 228

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVI 509
             Y+ YA+ R RSI R A     ++D ++  +     +   D   E +L   +  +P ++
Sbjct: 229 AAYLLYAFTRIRSIARLA-----NIDEEMLQKAAKETKIILDHEKEWKLGRCILRFPEIL 283

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +        + L  Y+Y+LA+ F   +       + R       K+ M R+ L  A A+I
Sbjct: 284 QKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGKILKVNMWRMLLCEATAAI 342

Query: 570 INSGLNIIGVESPNEM 585
           +  G +I+G++   +M
Sbjct: 343 MAKGFDILGIKPLQKM 358


>gi|328708076|ref|XP_001946117.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 572

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 93/533 (17%), Positives = 196/533 (36%), Gaps = 79/533 (14%)

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRC 143
              ++ ++L        +++I+ + I   R    +      I+F S N   P HVGH R 
Sbjct: 87  NPYYVIIHLDK---YDFINNILKNNIGITRQHCVQNSKPCIIDFSSPNIAKPFHVGHLRS 143

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
            ++G+ +++L  F    V R  Y+ D G Q     L +         NN   +       
Sbjct: 144 TIIGNFISNLRNFIDGRVVRINYLGDWGPQFGYTLLGLEQMKPDISKNN---MTIESLHN 200

Query: 204 VYLKHVGKE-----LADKYSSELLNFP---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            Y+           + DK  S   +         +  + +      +  +    K L I 
Sbjct: 201 AYILANQMAKNDSSIHDKAKSIFNDLECGNSTSDINTLWNEFRSITINELEVIYKRLGIV 260

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D +  E  + +     I+D++  L++ G +              K   D   ++  +  
Sbjct: 261 FDEYDWESKYSK---EKIQDVLKQLSKIGLL--------------KVKEDGSTVVLSNNQ 303

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAA-- 372
                +  +LK+D S  Y   D+A    +++  G +++ YV+ +  S +   L+++ A  
Sbjct: 304 -----ETTILKNDNSTLYITRDIAAALRRHKYYGSEDLFYVVDNTQSKHFYLLKSLIAQI 358

Query: 373 ---------------AVSEKKAQINVLLCELVRLYRDGMPIKMS---KRAGDFITLRHVV 414
                           +S +K Q  +LL +L+   +  M +K         + +    V 
Sbjct: 359 NSNINVHHIPFGRIHGMSSRKGQ-GILLDQLLNQAKSTMVLKRKYSETTKINSMDDNEVA 417

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           D +G  ++    L +K  +  +F +     Q   +    +QY + R  S+         +
Sbjct: 418 DVLGISAIVINDLKQKRKKDYNFSWESAL-QVNGDTGIKLQYTHCRLLSL--------EE 468

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++ ++   + +  E   +T  L LI+ +  +  V+       E   L  YL+ L++  + 
Sbjct: 469 VNCNITLPDEVIAECFTETVALDLILEICRFEDVLTETNQELEACILVNYLFRLSNCINK 528

Query: 535 HWSHGRENPRLRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585
                     L+ +   N   T+   R+ L +     +++G+ I+G+     M
Sbjct: 529 ---------ALKVLNVKNSSSTIAQQRILLFYRARETLSAGMKILGLVPLKCM 572


>gi|83273903|ref|XP_729602.1| arginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23487879|gb|EAA21167.1| arginyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 1643

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 107/589 (18%), Positives = 194/589 (32%), Gaps = 132/589 (22%)

Query: 39  DCAHGHLSTNAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +   GH   N A+ + +  G      +   ++  I+  I  +   D +  + +GFI + +
Sbjct: 33  NMKFGHFQCNNAINIYKKYGKELNFENAHKVSLSIIENINEN-LFDDINASPQGFITVKI 91

Query: 94  SPSYLRKILSSIVVSG--------IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           S  Y+ K L  +  +          E       K   V I+F S N    MHVGH R  +
Sbjct: 92  SKDYIEKSLLKLYKNNKININVDMDEINDGNNAKYENVLIDFSSPNIAKEMHVGHLRSTI 151

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----GY 200
           +GD++  +  F   +  R  ++ D G Q   +   +   Y     N   ++PE       
Sbjct: 152 IGDSICKIFEFLKVKTHRVNHVGDWGTQFGMIINYIITNYP----NYKEEMPELKSLTLL 207

Query: 201 YPGV---YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y      Y      E+  K  +  L   +E    I      +A  K   +  K L+I+ +
Sbjct: 208 YQEAKKCYDNDKDFEIKSKEYAIKLQEHDEDCRYIWTKI-CEASKKEFNNIYKILDIKLE 266

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +  E  +       I   ++ L  +  +                      L ++S    
Sbjct: 267 -YYGESFYIP----KIPSTLEILKDKNLLTNI----------------GDALCYKSEKY- 304

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
             V   L KS+G Y Y + D+     + +    D++IYV  +    + + L  +      
Sbjct: 305 -TVPLFLQKSNGGYGYDSTDITALYYRLKVLNVDSIIYVTDNGQLSHFETLFELCKQAEW 363

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416
               + ++      L  +    K   R+G  I L ++++E                    
Sbjct: 364 VDDDVKLIHVGFG-LVLNTDNKKFKTRSGTNIKLINLINEGTERAKKDLMERIKLKSDEE 422

Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
                          +   ++++  + +  +    F +  +    K N   Y+ YAY+R 
Sbjct: 423 KSYFDGIDIDKLSQDICVSAIKYFDIKQHRNTDYKFSYDNMLS-IKGNTGLYIIYAYSRI 481

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SIFR++                     E    EL LI  LAE                 
Sbjct: 482 CSIFRKSDINIE----------------ELVPDELNLINQLAE----------------- 508

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             Y YDL + F   + + +           N + T  RL L     S++
Sbjct: 509 --YTYDLTTTFTTFYENCKVL---------NSENTKSRLILCAITKSLL 546


>gi|260790573|ref|XP_002590316.1| hypothetical protein BRAFLDRAFT_58413 [Branchiostoma floridae]
 gi|229275508|gb|EEN46327.1| hypothetical protein BRAFLDRAFT_58413 [Branchiostoma floridae]
          Length = 496

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 110/534 (20%), Positives = 186/534 (34%), Gaps = 105/534 (19%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
           F   +   + +       E+KI+  I +  P+  + G           +PL    + I  
Sbjct: 5   FRRAIAGLISK--AARIHEEKIVPLIQVSNPKTSSEGEFLLPI-----KPL----IDIG- 52

Query: 67  LIVARIKIDPDVDSV---FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
                +  D          IA     NL  + S L K+       G       + KG KV
Sbjct: 53  ----VLPPDSVESGTAQDTIA-----NLT-NRSVLSKVQEDREQYGRRSDLFGVRKGEKV 102

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +E+ S N   P H GH R  ++G+ +A L    G +V R  Y+ D G Q   LA+    
Sbjct: 103 VVEYSSPNIAKPFHAGHLRSTIIGNFIAKLHHALGNKVVRINYLGDWGVQFGLLAVGFQL 162

Query: 184 -RYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSE-----LLNFPEEKWLPIVKD 235
              ++AL  N    P  +   VY+K     +E  D +        LL   +   L +   
Sbjct: 163 FGSEEALQTN----PIQHLFEVYVKVNQAAEENEDIHRQAREFFRLLEHRDPTALALWTR 218

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   ++ +  R   K L +Q D +  E  +        + +I  L   G +         
Sbjct: 219 FRGLSIEEYSRI-YKRLGVQFDEYSGESMY----SDRSQQVISQLREAGLL------QTT 267

Query: 296 SKTTQKCDM-DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            + T   D+ +   + F ST         + +SDG+  Y   D+A    +YER  FD M 
Sbjct: 268 ERGTGVVDLSEDNSMSFYST---------VTRSDGTSLYITRDIAAAVDRYERFKFDRMY 318

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV+      + ++L      +    A             + G    M  R G+ + L  +
Sbjct: 319 YVVDKSQEDHFRQLFKTLEKMGYTWADRCHH-------VKFGRVQGMKTRRGEVVLLEDI 371

Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           ++E                           VG  +V+      K      FD+ +   QS
Sbjct: 372 LNEAQRQMLDNMQQAATTKHMDNPEEVAETVGITAVQAQDFRGKILSDYKFDWNRAL-QS 430

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           K +   ++QY +AR  S                  R++  + S  D +E +L++
Sbjct: 431 KGDTGVFLQYTHARLCSHL-----------VAAAHRSLKVKGSPKDVAEARLLL 473


>gi|154281943|ref|XP_001541784.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150411963|gb|EDN07351.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 596

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 105/617 (17%), Positives = 206/617 (33%), Gaps = 140/617 (22%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
            + ++     + Y+ E+  ++    + +    I+R +  AHG +    A +  R  G++ 
Sbjct: 29  NIISNPVDLYRCYVAEVVKQVVNCNEDIAYNSIQRTQVLAHGDVVLVVARL--RLKGVNI 86

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
             +A                           LS  Y    L     +G++  +N      
Sbjct: 87  DQVAVD-------------------------LSNKYGHDKL-----AGLKNPKNEAAGRK 116

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           KV +EF S N     H GH R  ++G  +++L    G++V +  Y+ D G Q   LA+  
Sbjct: 117 KVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYKSMGWDVLKINYLGDWGKQFGLLAVGW 176

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---------------FPE 226
                + L+  ++     +   VY+K      +++ +S+                     
Sbjct: 177 QKFGSEELFQKEA---LKHLLDVYVKINALFKSEQEASKSARDNGQYTLEIENRGLYAER 233

Query: 227 EKWLPIVKDYSVQA--MMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             +   ++D   +A  + K  RD            LNI  D +  E       P  I  +
Sbjct: 234 NAFFKRMEDRDPEALSLWKRFRDISIERYISTYARLNIAFDEYSGESTVR---PETIEKV 290

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            + L  +G +YE      +++ +   + ++       T         +    G+ TY   
Sbjct: 291 ENMLKDRG-IYE------ENEGSWVINFEKHGARKLGTA-------VVRNRGGTTTYLLR 336

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D+A    + E+                          +   K     LL +++      M
Sbjct: 337 DVAAVLERVEK--------------------------LGTVK-----LLSDILDECGSAM 365

Query: 397 PIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
              M      +  +     V D VG  ++    +  K      FD  K+    + +   Y
Sbjct: 366 HEVMRSNEAKYAQVADPEAVADVVGITAIMAQDMSGKRINNYPFDITKMTSF-EGDTGLY 424

Query: 454 VQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +QY++AR  SI R+A    D     DF L            +   + ++  +A+YP +  
Sbjct: 425 LQYSHARLCSIMRKANLTADQVAKADFSLLK----------EPHAIDILRLMAQYPDMTT 474

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A    EP  +  YL+ L                         ++ + R  L      ++
Sbjct: 475 QAFKTLEPTTILTYLFRLTHQ--------------VLGTDEAPEVMLARSALYEGALQVL 520

Query: 571 NSGLNIIGVESPNE-MS 586
            +G+ ++G     + M+
Sbjct: 521 ENGMRLLGFTPVAKSMT 537


>gi|73973436|ref|XP_867850.1| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 2 [Canis
           familiaris]
          Length = 421

 Score =  215 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 86/382 (22%), Positives = 157/382 (41%), Gaps = 39/382 (10%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG-- 120
           A  +  ++K D  V  +   G+G +N  ++   L K  L  ++  G +YG ++ +  G  
Sbjct: 65  ARKLAEKLKCDSVVSEIS-TGQGTVNFKINRELLTKTVLQQVIKDGSKYGLKSELFSGLP 123

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L  
Sbjct: 124 QKKIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGT 183

Query: 180 SVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKD 235
                 Y++ L ++        Y  V  +    +   K + E    L   + + L + + 
Sbjct: 184 GFQLFGYEEKLQSSPLQHLFEVYVQVNKEAADDKNVAKSAHEFFQRLELGDTQALALWQK 243

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   ++ + +R   K L +  D +  E  F+R      ++++  L  +G + + I     
Sbjct: 244 FRDLSIEEYVRV-YKRLGVHFDEYSGES-FYREKS---QEVLKLLDSKGLLQKTI----- 293

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353
            K T   D+            GD      L++SDG+  Y   DLA    + ++  FD MI
Sbjct: 294 -KGTAIVDLSGN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDKYNFDTMI 343

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           YV       + +++  +   +    A       E  +    G+   M  R GD   L  V
Sbjct: 344 YVTDKGQKKHFQQVFQMLQIMGYDWA-------ERCQHVPFGVVQGMKTRKGDVTFLEDV 396

Query: 414 VDEVGSDSVRFMMLWRKNSELL 435
           ++E+    ++ M   +    LL
Sbjct: 397 LNEIRLRMLQNMASLKSEFSLL 418


>gi|196005211|ref|XP_002112472.1| hypothetical protein TRIADDRAFT_56525 [Trichoplax adhaerens]
 gi|190584513|gb|EDV24582.1| hypothetical protein TRIADDRAFT_56525 [Trichoplax adhaerens]
          Length = 519

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 92/547 (16%), Positives = 189/547 (34%), Gaps = 115/547 (21%)

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             A+ +  +++ID          K  I    +   L   + +  ++              
Sbjct: 64  QTAQNLAQQVQIDNHYIHNVTVDKASIIFQPNHQTLMTEVLNNAMNNNAVTDYSNETKKH 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +++ S N   P HVGH R   +G+ +A++  + G +VTR  Y+ D G Q   L +   
Sbjct: 124 ILVDYSSPNIAKPFHVGHLRSTFIGNFIANINEYFGNKVTRINYLGDWGVQFGLLGVGFQ 183

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +     +  +    +   VY+  +  E+              +    +++ +     
Sbjct: 184 ---KFGSTESLINNAIKHLFDVYV-QINNEM--------------ERDASIQERARLFAR 225

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  DD + +N+              +   I +DII+ L   G + +             
Sbjct: 226 RMEEDDEECINLWKQF----RSLSIKEYKKIYKDIIEKLRDDGLLVDN------------ 269

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360
                                              D+     ++ER  FD M YV  S  
Sbjct: 270 ----------------------------------RDIVAAIDRFERFNFDEMYYVTSSAQ 295

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           + + + L  +         +    +         GM   MS R G+ + L+ ++D+    
Sbjct: 296 NLHFQHLFKILNLSGYNWVKNCYHVDF-------GMVKGMSTRTGNVVFLQDILDDAKER 348

Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
                             VG  ++    L  K  +  +F++ K+   S  +    +QY +
Sbjct: 349 MMKTLSRKHNDPSSIAELVGLAAILIQDLKAKRIKDYEFNWEKML-ASHGDTGPRLQYEH 407

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  SI  + + +  +++ D+            + S ++L+ H+  +   +  A +  EP
Sbjct: 408 ARLVSIAEKTQ-VPINMEADITSL-------LSENSAIKLVEHITRFEGELVRAKLHSEP 459

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
             L  YL+ L+ +      + +       V     K+   R+ L  A  + +  GLNI+G
Sbjct: 460 CFLVNYLFILSHLISAANHNLK-------VLGQTEKIAEARMLLFAASRNTLAKGLNILG 512

Query: 579 VESPNEM 585
           V+  N+M
Sbjct: 513 VKPLNKM 519


>gi|167461684|ref|ZP_02326773.1| arginine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 367

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 148/400 (37%), Gaps = 60/400 (15%)

Query: 213 LADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           + D+           ++    + +Y V+  +         L ++ D  + E  ++     
Sbjct: 1   MEDEARGWFRKLETGDEDAKRLWEYFVKVSLNEFERMYDKLGVKFDHTLGESFYN----D 56

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I  +I  L  Q  + E                     + R    G      + KSDG+ 
Sbjct: 57  KIVPVIKALKEQNLLEES----------------DGAYVVRLDEEGMP-PCLITKSDGTT 99

Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y   DLA    +++    D ++YV+G +   + K++ AV   + +   +    +   + 
Sbjct: 100 IYPTRDLATAIYRHDVMKGDKLLYVVGGEQKLHFKQVFAVLGKLGKTWVESCEHVPFGLM 159

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFM 425
            +      KMS R G  ++L  V+ E                         VG  ++ F 
Sbjct: 160 KFAGK---KMSTRRGRVVSLEEVLQEAVNRAREIIEEKNPLLPDKEHVAEAVGIGAIVFG 216

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
            L       +DF   +      E    YVQY +AR +S+  +A+  F   D      +  
Sbjct: 217 DLKNNRVNEIDFSLDEALNFDGE-TGPYVQYTFARTQSVLAKAEWNFSLADCKNI-LSHS 274

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
              S   +S  QLI  L+ YP+ IE A    EP  +A Y  + A  F+  ++  R     
Sbjct: 275 DLNSINHSSVWQLIKQLSLYPQAIERAVKRNEPSVVARYALETAKAFNRFYNLNR----- 329

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + A + K    +L +  A A II   L+++G+++P +M
Sbjct: 330 --ILAEDEKEQKAKLIVTTAAAEIIRRSLHLLGLKTPKQM 367


>gi|58699629|ref|ZP_00374318.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533852|gb|EAL58162.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 194

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 94/204 (46%), Positives = 127/204 (62%), Gaps = 10/204 (4%)

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V L  +V  + +G P+KMSKR+G+F+T R VV+EVG D  RF+ML RKN  +LDFDF KV
Sbjct: 1   VKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKV 60

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           KEQSK+NP+FYVQYA+AR  S+ R A    P  D  L               EL LI  L
Sbjct: 61  KEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLLRTGG----------ELFLIKTL 110

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           A++P V+E A    EP+++ FYL ++A  FH  W +G+ +  +RF+  +N  LT  R+ L
Sbjct: 111 AKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGKSDLNMRFILEDNLNLTAARMFL 170

Query: 563 VHAVASIINSGLNIIGVESPNEMS 586
           V A+A +I SGL+I  +E   EMS
Sbjct: 171 VQALAHVIASGLSIFNIEPLKEMS 194


>gi|295674131|ref|XP_002797611.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226280261|gb|EEH35827.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 584

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 91/601 (15%), Positives = 190/601 (31%), Gaps = 82/601 (13%)

Query: 12  KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLS-TNAAMILSRPLGLDPLTIAELIVA 70
           + ++ E+  +            ++       G L     A+ +       P  +A+ I+ 
Sbjct: 38  RAHIAELVAEALGVDSQAVYPRLQWTNSLDKGDLVLAAPALQI--KGKKPPEVVAQ-ILE 94

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
            +     +++    G   I  +  P  L K +   +             G+    +    
Sbjct: 95  NLAPSDLINTPIAVGTH-IQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKG 153

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             K+ +EF S N   P H GH R  ++G  LA+L    G++V +  Y+ D G Q   LA 
Sbjct: 154 KKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVVKMNYLGDWGKQYGLLAN 213

Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSS-ELLNFPEEKWLPIVKD 235
                     Y N+ +L   P  +   VY+K + K++A++    + L    +      KD
Sbjct: 214 GY------EKYGNEEELVKDPINHLFDVYVK-INKDVAEQEGPIKELREQIKARKEKDKD 266

Query: 236 YSV--QAMMKIIRDDLKALNIQHDIFIS---------EDDFHRGDPSPIRDIIDNLARQG 284
            +   + +   I      +  ++   +             F        ++    L    
Sbjct: 267 ITELEKELQAKIDASYDEMARRYFKSMEDGDEKALALWRRFRDLSIEKYKETYARLNIGF 326

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
             Y G          +  +   K  +  ++         +LK  G   +        K +
Sbjct: 327 DCYSGESQVKSESLAKAYEAMEKTGVSENSAPCIKFLNDILKDVGEKMHEVMKKNAAKYE 386

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL-LCELVRLYRDGMPIKMSKR 403
                +    +              V      +   +    L + ++L     P  ++  
Sbjct: 387 QVEEPEKTADIS----------WYHVCDGPGYEWQAVCRRSLSKHIQLPLFLFPTPLTTP 436

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           A                               +F+   +    + +   Y+QYA+AR  S
Sbjct: 437 ANIIPN------------------KTPRINGYEFNLDVMTSF-EGDTGPYLQYAHARLCS 477

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           + R+A       D D             +   + LI  LA +P V+ N T   EP  +  
Sbjct: 478 MTRKA-------DVDPSELTTANLSLLTEPHAIDLIRLLAVWPDVVFNTTKTLEPTTILT 530

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           YL+ +  V    +   +       V  +  ++   R+ +      ++++G+ ++G+   +
Sbjct: 531 YLFRMTHVLSSGYDVLK-------VVGSEPEVKKARMAMYDCARQVLSNGMRLLGLNPVD 583

Query: 584 E 584
            
Sbjct: 584 R 584


>gi|289672019|ref|ZP_06492909.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 270

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 106/286 (37%), Gaps = 47/286 (16%)

Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G Y Y   DLA  + + +    D ++Y +    + + +++  VA         + +    
Sbjct: 3   GGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALHFQQVFEVARRAGFVHDGMQLEHMG 62

Query: 388 LVRL-YRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419
              +   DG P K   R G  + L  ++DE                           VG 
Sbjct: 63  FGTMNGADGRPFK--TRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAELRSIAKAVGI 120

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            +V++  L +  +    F+F ++    + N   Y+ YAY R   +FR+         FD 
Sbjct: 121 SAVKYADLSKHRASDYSFNFDQMLSF-EGNTAPYLLYAYTRVAGVFRKLGSA-----FDA 174

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               ++         E +L   LA++   + N      P+ L  YLYDLA +F   + + 
Sbjct: 175 SKGQIVLAA----PQEQELAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENC 230

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                   + A N      RL+L       +  GL+++G+E+   M
Sbjct: 231 ------PILGAENPDQQQSRLRLAALTGRTLKQGLDLLGLETLERM 270


>gi|167946398|ref|ZP_02533472.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 228

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/226 (35%), Positives = 123/226 (54%), Gaps = 18/226 (7%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           +     V +  +  ++  IRDDL    + +D + SE      +   +   I+ L   G+V
Sbjct: 21  DNRYRFVFELGLNTILDDIRDDLSLFGVNYDEWYSERSL--TESGAVNKAIERLRGSGHV 78

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           YE                    L F+ST  GD+ DR +++ +G  TYFA+D+AY   K E
Sbjct: 79  YE----------------KNGALWFKSTDYGDEKDRVVVRDNGQTTYFASDIAYHMDKLE 122

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           RGF+ +I + G+DH GYV R++A   AV +  ++++VLL +   LYR G   +MS R+G+
Sbjct: 123 RGFERVIDIWGADHHGYVPRVKAAMQAVGDDPSKLDVLLVQFAILYRGGEKAQMSTRSGE 182

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           F+TLR +  EVG+D+ RF  + RK  + LDFD    K QS +NPV+
Sbjct: 183 FVTLRELRKEVGTDAARFFYVMRKCEQHLDFDLDLAKSQSSDNPVY 228


>gi|330807101|ref|YP_004351563.1| arginine--tRNA ligase (arginyl-tRNA synthetase), N-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375209|gb|AEA66559.1| Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), N-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 247

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 1/177 (0%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  + ++  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQAIAQLVTEGVLPEGLSPAIQVENTRDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            I+A +  D +V    IAG GFIN + +   L   L + +      G    G   +  ++
Sbjct: 65  KIIAALPTDENVSKADIAGPGFINFFQNTQALASRLDAALAD-ERIGVRKAGPLQRTVVD 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
             + N    MHVGH R  ++GD +A ++ F G  V R+ ++ D G Q   L   +  
Sbjct: 124 LSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDTVIRQNHVGDWGTQFGMLMAYLQE 180


>gi|71005906|ref|XP_757619.1| hypothetical protein UM01472.1 [Ustilago maydis 521]
 gi|46097112|gb|EAK82345.1| hypothetical protein UM01472.1 [Ustilago maydis 521]
          Length = 392

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 148/399 (37%), Gaps = 65/399 (16%)

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +   +E+ L + + +   ++ K I +    LNIQ D++  E    + +   I   ++ L 
Sbjct: 1   MEDGDEECLALWQKFRDLSIKKYI-EVYDRLNIQFDVYSGESQVKKEN---IARSLEQLR 56

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
              +V                  D    L   T    +    + + DG+  Y   D+A  
Sbjct: 57  TCDFVTR---------------EDNGATLADLTQYKLEKA-VIERKDGTPLYITRDIAEA 100

Query: 342 KCKYER-----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
             ++++     GFD MIYV+ S    ++ +   V   +    AQ      + +     GM
Sbjct: 101 AQRFDKSFDGNGFDKMIYVVASQQDLHLAQFFKVLELMGYPWAQKETSRLQHINF---GM 157

Query: 397 PIKMSKRAGDFITLRHVVDE----------------------------VGSDSVRFMMLW 428
            + MS R G  + L +++DE                            VG  +V+   + 
Sbjct: 158 ILGMSTRKGTVVFLDNILDETRDKMHEVMKANEAKYAQVEDPERTADIVGMTAVKIQDMS 217

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-IFPDLDFDLFPRNVIPQ 487
            K     +FD+ ++    + +   Y+QY + R  S+ R+AKD    +L       + I  
Sbjct: 218 SKRINNYNFDWSRMLSF-EGDTGPYLQYNHVRLCSVERKAKDSDGLELATADLDLSSINL 276

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
           +   +     L++ +A++P  ++ A    +P  +  Y + L  +    W           
Sbjct: 277 DLISEPKARDLVMLIAQWPDTVKAAMKDHQPSTIVTYAFRLTHLISSCWE-------FLL 329

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           V+   + L + RL +      ++ S L ++ +     +S
Sbjct: 330 VKGQEKDLALARLFVFRCCKDVLGSALRLLTITPLEHLS 368


>gi|229059878|ref|ZP_04197253.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719423|gb|EEL71026.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 314

 Score =  210 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/358 (22%), Positives = 129/358 (36%), Gaps = 70/358 (19%)

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++   F  E  ++      + D I  L     + E                    L+   
Sbjct: 1   MEFTNFQGEAFYN----DKMEDFIGILEEHDLLEES----------------EGALVVNL 40

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372
              G      + KSDG+  Y   DL     +     FD  +YV+G + S +  +   V  
Sbjct: 41  EKEGMP-PCLIRKSDGATIYATRDLTAALYRQNTYEFDKALYVVGPEQSLHFNQFFTVLK 99

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416
            +        +       + +DG   KMS R G  I L  V++E                
Sbjct: 100 KLGYDWVD-GMEHVPFGFILKDGK--KMSTRKGRIILLEEVLEEAVALAEQNIEEKNPNL 156

Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    VG  +V F  L  +    ++F    + +   E    YVQY +AR  SI R+
Sbjct: 157 KQKEEVAKQVGIGAVIFHDLKNERMHNIEFSLENMLKFEGE-TGPYVQYTHARACSILRK 215

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
               F    F L            D     ++  L ++P+VIE A    EP  ++ Y+ D
Sbjct: 216 DSVEFETCTFALK-----------DDYSWSVVKLLNKFPQVIEAAFNKNEPSTISKYVLD 264

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +A  F+ ++ + R       +   N +    RL L +AV  ++  GL ++GV +P EM
Sbjct: 265 VAQAFNKYYGNVR-------ILEENEE-KESRLALAYAVTVVLKEGLRLLGVGAPEEM 314


>gi|119568973|gb|EAW48588.1| arginyl-tRNA synthetase-like, isoform CRA_e [Homo sapiens]
 gi|119568975|gb|EAW48590.1| arginyl-tRNA synthetase-like, isoform CRA_e [Homo sapiens]
 gi|119568976|gb|EAW48591.1| arginyl-tRNA synthetase-like, isoform CRA_e [Homo sapiens]
          Length = 403

 Score =  209 bits (533), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/446 (17%), Positives = 159/446 (35%), Gaps = 77/446 (17%)

Query: 173 QINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEK 228
           Q   L        Y++ L +N        Y  V  +    +   K + E    L   + +
Sbjct: 2   QFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQ 61

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L + + +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G + +
Sbjct: 62  ALSLWQKFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLK 116

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER 347
            I      K T   D+            GD      +++SDG+  Y   DLA    + ++
Sbjct: 117 TI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDK 161

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV       + +++  +   +    A       E  +    G+   M  R GD
Sbjct: 162 YNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGD 214

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDF 439
              L  V++E+    ++ M   +   EL                             F +
Sbjct: 215 VTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSW 274

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +V  QS+ +   ++QY +AR  S+            F     N        +   + ++
Sbjct: 275 DRV-FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSIL 324

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            HL  +  V+  ++   +P  +  YL  L+ +            +   ++ +  ++   R
Sbjct: 325 QHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHL-------AAVAHKTLQIKDSPPEVAGAR 377

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  AV S++ +G+ ++G+     M
Sbjct: 378 LHLFKAVRSVLANGMKLLGITPVCRM 403


>gi|83770024|dbj|BAE60159.1| unnamed protein product [Aspergillus oryzae]
          Length = 538

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 93/538 (17%), Positives = 185/538 (34%), Gaps = 122/538 (22%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G+    N      ++ IEF S N   P   GH R  ++G  LA+L   + ++VTR  Y+ 
Sbjct: 36  GLREPNNPDAGRKRIIIEFGSPNIAKPFRAGHLRSTILGGFLANLYEEADWDVTRMNYLG 95

Query: 169 DAGA-------QINTLAL-----------------SVFWRYQQALYNNDSDLPEGYYPGV 204
           D G        +   L +                 +V  + Q+++ +    +      G 
Sbjct: 96  DRGNVLGVGVEKFGDLDVLERDPIAQLFDVYVRVSAVGRKEQESIESMRKVIASRKSQGH 155

Query: 205 YLKHVGKEL-----------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            L+ + +EL           A KY   +    EE  L + K +   +++K        LN
Sbjct: 156 PLEDMERELELLQANSMDERAIKYFKRMCEGDEEA-LGLWKKFRDLSIIKYQ-ASFARLN 213

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I +D++  E          + ++                   +K  +  ++    +L   
Sbjct: 214 IHYDVYAGESQIKNESMKEVENM-------------------TKEKRVSEVSDGAVLVDL 254

Query: 314 TMVGDDVDR-PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA 371
           T     + +  + K DG+  Y + D+     +  E  +DNMIYV+ S    ++ +L  + 
Sbjct: 255 TKYSKKLSKEIVRKKDGTSNYMSRDIGAVFERDEEYHYDNMIYVIASQQDLHMAQLIKII 314

Query: 372 AAVSEK--KAQINVL-----------------LCELVRLYRDGMPIKMSKRAGDFITLRH 412
             +  K    ++  +                 L +++R  +D M   M      +  +  
Sbjct: 315 ELIGRKGLADKLEHVNFGLVHEMSTRRGTVKFLDDILRDAKDKMHEVMRSNQAKYEQVED 374

Query: 413 ---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
              V D +   +V    +  K +    FD  ++     +    Y+QY++AR  SI R+A 
Sbjct: 375 PEKVADILDISAVLVQDMASKRN-DYTFDMDRMTSFEGDK-GPYLQYSHARLCSIIRKAD 432

Query: 470 ---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
              +   D D  L            +     ++  LA++P                    
Sbjct: 433 LPSERLKDADLSLLQ----------EKQAASIVQKLAQWPE------------------- 463

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            L    +  + H         V  +  +L + RL L      ++++ + ++G+     
Sbjct: 464 -LTHALNSSYEHLN-------VLNSEPELKLARLTLYSCARQVLSNAMRLLGLTPVER 513


>gi|212544232|ref|XP_002152270.1| arginyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210065239|gb|EEA19333.1| arginyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 831

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/532 (18%), Positives = 188/532 (35%), Gaps = 114/532 (21%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G+    +L     K+ IEF S N        H R  ++G  +A+     G++VTR  Y+ 
Sbjct: 143 GLHGPSSLEAGRKKLLIEFSSPNIASEFQARHLRSTILGAYIANQYENMGWDVTRLNYLG 202

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY----------------LKHVGKE 212
           D G  +  L ++      + L+  D   P G+   +Y                ++  G +
Sbjct: 203 DWGKPMGLLGVAWEKFGSEELFQAD---PAGHLHDIYHKILELFVPEQAASKKIRDEGGD 259

Query: 213 LADKYSSEL----------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            A      +          +   +E+ + + K  +    +K   D    LN++ D +  E
Sbjct: 260 PASIEGQGVFAERNAFFKRMEDDDEQAVALWKR-ARDVNIKNYTDLYARLNVRFDEYSGE 318

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                     + +I   L  +G          +S  +   D+ +   +  + ++ D    
Sbjct: 319 SQVRLETMMEVEEI---LKSRG-------ISEESAGSWMIDLKKHAKISGTAIIRDRT-- 366

Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHS-GYVKRLEAVAAA--VSEKK 378
                 GS TY   DLA    +  +  FD MIYV+ +D    +  RL  +     +S+  
Sbjct: 367 ------GSSTYLLRDLAAVLERSRKYSFDKMIYVVAADQHTTHFSRLFKILELMDMSDLA 420

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
            ++  +    V         KMS++ G+  TL  ++D+                      
Sbjct: 421 NKLQHVQFSNVS--------KMSEKFGNDRTLDEILDQFQKAMCESFKIHPEMASLLGHS 472

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +   ++    L  K ++   F+  ++          Y+QY YAR  +I      
Sbjct: 473 EESIFSIAISALVAGELSSKRAQDNAFEVTRMTSFEPG-TGPYLQYWYARLCTIL----- 526

Query: 471 IFPDLDFDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                  D +  ++ P E EFD     +  L+  L ++P +   A  + EP  +  YL +
Sbjct: 527 -------DAYETSIKPSEEEFDTLSDEDFSLLRLLVQFPDITHLAYESLEPATVMAYLVN 579

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           LA      +     N      QAN          L  A   ++ SG+ ++G+
Sbjct: 580 LAVQLEVCFDECENNVANNLTQAN----------LYEATRRVMESGMKLLGI 621


>gi|269838307|ref|YP_003320535.1| arginyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787570|gb|ACZ39713.1| arginyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 724

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/394 (20%), Positives = 153/394 (38%), Gaps = 65/394 (16%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           +L    +  ++ + ++    +M +  R     L++  D++  E +         R I+  
Sbjct: 368 QLWEKKDPAFVQLWEETKAWSMEEFHRI-YDQLDVHFDVWFYESEVEEPG----RQIVQE 422

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L  +G           S       +D K  L + T        P+L+SDG+  Y   DLA
Sbjct: 423 LLERG-------IAEISDGLPVVKIDEKLGLEKET----YRTLPILRSDGTTLYSTKDLA 471

Query: 340 YFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             K K+E    D  I+V+    S Y +++  +      ++A+    L     +   G   
Sbjct: 472 LTKMKFEQYHVDRSIWVVDVRQSLYFQQIFKIMELWGFEQAEKCYHLSYETVMLPTGA-- 529

Query: 399 KMSKRAGDFITLRHVV---------------------------DEVGSDSVRFMMLWRKN 431
            MS R+G+ +    +                            ++VG  S+++ ML R N
Sbjct: 530 -MSSRSGNVVLYEDIAARVLQRAREIIDEKNPSLPDEVKDRIANDVGLGSMKYGMLMRDN 588

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           + +L FD  +     + +   Y+QYA+AR   I  +          D  P   +   ++ 
Sbjct: 589 NRVLVFDIEEALSF-EGHAAPYIQYAHARACRILEK---------VDQIPTEGLT-FTDL 637

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
            T E+ LI  +A +P  +E A    +P  +A Y+Y+LA  F+  +           +QA 
Sbjct: 638 TTEEINLIQQVAIFPSEVERAAAEYKPLVIANYVYELAKRFNDFYRAC------PVLQAE 691

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             + +      V A    + +GL ++G+ +P  M
Sbjct: 692 EPQRSARLAL-VAAARQTLANGLGLLGIAAPETM 724



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 7/188 (3%)

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINL-YLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IAE +  R++      SV  A  G+IN+ + +  +  +++ +++ +G +YGR    K 
Sbjct: 85  QAIAEQVAERLRAADGFASVE-AVNGYINIGFDTNRFSNEVVHAVLTTGEDYGRGEP-KT 142

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +V +E+   N     HVGH R   +G+ L+ +M F+G++V +  YI D G  +    + 
Sbjct: 143 DRVMVEYSQPNTHKAFHVGHLRNVCLGNALSRIMKFAGFDVLQANYIGDIGLHV----IK 198

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             W YQ+     +    +       +     +  +     +    +          +V  
Sbjct: 199 TLWCYQRFHQGEEPPRAQRGRWLGEIYTEADQRLNYRQDVVDLLNDLARNDATFREAVDR 258

Query: 241 MMKIIRDD 248
           MMK +  +
Sbjct: 259 MMKELWRE 266


>gi|330861412|emb|CBX71641.1| hypothetical protein YEW_GQ28450 [Yersinia enterocolitica W22703]
          Length = 244

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 46/262 (17%)

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL 410
           M+Y + S    ++ +   +          + +      + L +DG P K   R+G  + L
Sbjct: 1   MLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFK--TRSGGTVKL 58

Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443
             ++DE                           VG  +V++  L +  +    FD+  + 
Sbjct: 59  SDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNML 118

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N   Y+QYAY R  S+F++A          +   N+I      +  E  L   L 
Sbjct: 119 ALD-GNTAPYMQYAYTRVVSVFKRAG---------VDESNLILPLVITEDREAALATRLL 168

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           ++  VI        P+ +  YLYDLA +F   + H +       + A++ +    RL+L 
Sbjct: 169 QFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQ------ILNADSEESRQSRLKLA 222

Query: 564 HAVASIINSGLNIIGVESPNEM 585
              A  +  GL+ +G+++   M
Sbjct: 223 MLTAKTLKQGLDTLGIQTVERM 244


>gi|238008168|gb|ACR35119.1| unknown [Zea mays]
          Length = 390

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 36/312 (11%)

Query: 40  CAHGHLSTNAAMIL-SRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
                   N AM L S+  G      +P  I + I   +     ++S  +AG GF+N+ L
Sbjct: 102 AKFADYQCNNAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVL 161

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S  ++ + +  ++V+GI+     I    +  I+F S N    MHVGH R  ++GDTLA +
Sbjct: 162 SNRWVAQRIQDMLVNGIKTWAP-ILPVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARM 220

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHVG 210
             FS  +V R  ++ D G Q   L   +F ++   Q+       DL   Y    +     
Sbjct: 221 FEFSNVDVLRRNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDND 280

Query: 211 KELADKYSSELLNF--PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            E   +    ++     EE++    K      +  I R +   +  + ++ + E      
Sbjct: 281 PEFKARAQQGVVRLQGGEERYREAWK-----KICDISRSEFDLVYKRLNVVLEEKGESFY 335

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +P  I  +++ L+ +G + E                +  +++F   + G  +   ++KSD
Sbjct: 336 NPY-IPQVLEELSSKGLIKES---------------EGARVIF---IQGHQIPLIVVKSD 376

Query: 329 GSYTYFAADLAY 340
           G + Y + DLA 
Sbjct: 377 GGFNYASTDLAA 388


>gi|167945582|ref|ZP_02532656.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
 gi|110589102|gb|ABG77060.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 188

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/173 (39%), Positives = 101/173 (58%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
                +   L ++     +    +    IER RD  HG  +TN A++L++P    P  +A
Sbjct: 4   QIQQLVSTALAQLANHGVIPADAVPSPTIERARDPRHGDFATNVALVLAKPARSKPRDLA 63

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E ++A +     ++   IAG GFIN YLS      ++ +I+  G +YGR+ +G+G +V +
Sbjct: 64  EKLMAALPASAMIEKTEIAGPGFINFYLSADAYHALVPAILEQGPDYGRSDLGQGKRVQV 123

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           EFVSANPTGP+HVGH R A  G  +A L+A  GY+V REYY+NDAG Q++ L 
Sbjct: 124 EFVSANPTGPLHVGHGRGAAYGSVVADLLAAVGYDVHREYYVNDAGRQMDILG 176


>gi|8250401|emb|CAB93578.1| putative arginyl-tRNA synthase [Lactococcus lactis]
          Length = 262

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 47/283 (16%)

Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y   DLA    + +   F   +YV+G + + + K+L+AV        +  +++   
Sbjct: 1   GATLYITRDLATAAYRKKTFNFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSD-DMVHVP 59

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSV 422
              + + G   K S R G  + L   +DE                         VG  +V
Sbjct: 60  FGMVTQGGK--KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVAKQVGVGAV 117

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           +F  L    +   DFD  ++     E    YVQYA+AR +SI R+A       +  L   
Sbjct: 118 KFYDLKTDRNNGYDFDLDEMVSFEGE-TGPYVQYAHARIQSILRKANRKVNIDNISLVVS 176

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                    D    +++  L E+P +++ A    EP  +A Y   LA  F+ +++H R  
Sbjct: 177 ---------DAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFNKYYAHVR-- 225

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                +  ++ +L   RL L+ A + ++   L ++GV +P  M
Sbjct: 226 -----ILEDDAQL-DGRLALISATSIVLKEALRLLGVAAPENM 262


>gi|261203070|ref|XP_002628749.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239590846|gb|EEQ73427.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 526

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 92/497 (18%), Positives = 175/497 (35%), Gaps = 97/497 (19%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I+R +  AHG +    A +  +   +D   +A  + +++     + +    G  FI ++ 
Sbjct: 61  IQRTQVLAHGDVMVVVARLRLKGANVD--QVALDLSSKLCGISLISNPVPKGV-FIPIFF 117

Query: 94  SPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
           S + L           R++     ++G++   N      KV +EF S N     H GH R
Sbjct: 118 SATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAGHLR 177

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
             ++G  +A+L    G++V +  Y+ D G Q   LA+       + L+  +   P  +  
Sbjct: 178 STIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLAVGWQKFGSEELFQKE---PLKHLL 234

Query: 203 GVYLK----------------HVGKELADKYSSEL----------LNFPEEKWLPIVKDY 236
            VY K                  G++ ++  +  L          +   +   L + + +
Sbjct: 235 DVYAKINTLFKPEQEASKNARDNGQDTSEIENKGLYAERNAFFKKMEDGDPDALSLWRRF 294

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              ++ + IR     LNI  D +  E       P  I  +   L  +G +YE      ++
Sbjct: 295 RDISIERYIR-TYARLNIAFDEYSGESTVR---PETIESVEKMLKEKG-IYE------EN 343

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355
           + +   D  +       T         +    G+ TY   D+A    +  +  FD MIYV
Sbjct: 344 EGSWVIDFKKHGARKLGTA-------VVRNRGGTTTYLLRDIAAVLERVGKYKFDKMIYV 396

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           + ++   Y +R+      +        ++          G    MS R G    L  ++D
Sbjct: 397 VSAEQDSYFQRVFKTIEIMGYPDIATKLVHVNF------GKVQGMSSRLGTVKLLSDILD 450

Query: 416 E----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           E                            VG  +V    +  K      FD  ++    +
Sbjct: 451 ECGNAMHEVMRANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMTSF-E 509

Query: 448 ENPVFYVQYAYARCRSI 464
            +   Y+QY++AR   +
Sbjct: 510 GDTGPYLQYSHARLYRM 526


>gi|223935965|ref|ZP_03627879.1| Arginine--tRNA ligase [bacterium Ellin514]
 gi|223895187|gb|EEF61634.1| Arginine--tRNA ligase [bacterium Ellin514]
          Length = 302

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 113/315 (35%), Gaps = 51/315 (16%)

Query: 305 DRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361
            +KQ  F     G+    P  + KSDG+  Y   DLA    + E      + YV G    
Sbjct: 5   SQKQDPFLKQEDGEWKPNPALIQKSDGAANYATTDLATLAYRLETWNPAEIAYVTGGPQQ 64

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416
            + +++ A+      +       +     L  DG P K   R+G+ + L  ++DE     
Sbjct: 65  LHFQQIFAIFRRWHPEAPVKLAHVWFGSILGEDGKPFK--TRSGETVKLADLLDEAEERA 122

Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                     VG  ++++  L         F + ++      N 
Sbjct: 123 YKVVSDKATERETTVPEEQKREIARVVGLGALKYADLLPNRQSDYVFSWDRMLAL-NGNT 181

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
             Y+QYAYAR RSIFR+         +           S     E+ L  HL  +  V+E
Sbjct: 182 APYLQYAYARIRSIFRRGGIENEASGWS-------GTISLTAPDEIILSKHLLNFSLVLE 234

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                  P  L  YLY+L+  F   + +    P L+    +       RL L    A ++
Sbjct: 235 GVAEEYRPNYLCNYLYELSGHFARFYENC---PVLK----SEPAERASRLLLCDLTARVL 287

Query: 571 NSGLNIIGVESPNEM 585
             GL I+G+E   +M
Sbjct: 288 KQGLEILGIEVLEQM 302


>gi|294878710|ref|XP_002768460.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239870913|gb|EER01178.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 388

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 131/363 (36%), Gaps = 53/363 (14%)

Query: 37  PRDCAHGHLSTNAAMILSRPLG-------LDPLTIAELIVARIKID--PDVDSVFIAGKG 87
             +   G    N AM L++            P  I E I + +  +   + +S  +A  G
Sbjct: 35  TANPKFGDYQCNNAMGLAKKFKSDLPDGMKIPKQIGEKIKSNLMEESPEEFESATVAPAG 94

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+ + LS  ++ K L+S VV           +   V ++  S N    MHVGH R  ++G
Sbjct: 95  FVTVKLSSGWIAKQLTSSVVENT----ITYWEEPSVIVDMSSPNIAKEMHVGHLRSTILG 150

Query: 148 DTLASLMAFSGYEVT--------------REYYINDAGAQINTLALSVFWRYQQAL--YN 191
           +T++ ++ +SG +V               R  ++ D G Q   L   +   Y   L    
Sbjct: 151 ETVSRILEYSGNDVCNNIINRSSIDSQVQRINHVGDWGTQFGMLIEHMKDAYPDFLNHTP 210

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLK 250
             SDL   Y           +   +   E++     +++             K   +   
Sbjct: 211 EVSDLQSFYKAAKKRFDEEPDFKKRSQEEVVALQSGDEYARKAWQICCDISRKSFEEVYS 270

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            L I+      E  ++      I  I++ L ++G V                + +  + +
Sbjct: 271 RLGIEGLKEQGESFYNEM----IGPIVEKLEKEGLV---------------VESNGAKCI 311

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEA 369
           F      DDV   ++KSDG Y Y + D+     +  +   D ++Y+       + K+L  
Sbjct: 312 FTDV---DDVPMMVVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFE 368

Query: 370 VAA 372
           VA 
Sbjct: 369 VAK 371


>gi|197102930|ref|NP_001125645.1| probable arginyl-tRNA synthetase, mitochondrial [Pongo abelii]
 gi|55728733|emb|CAH91106.1| hypothetical protein [Pongo abelii]
          Length = 401

 Score =  205 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/446 (18%), Positives = 159/446 (35%), Gaps = 79/446 (17%)

Query: 173 QINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEK 228
           Q   L        Y++ L +N        Y  V  +    +   K + E    L   + +
Sbjct: 2   QFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQ 61

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L + + +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G +  
Sbjct: 62  ALSLWQKFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLR 116

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER 347
            I      K T   D+            GD      +++SDG+  Y   DLA    + ++
Sbjct: 117 TI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDK 161

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV       + +++  +   +    A       E  +    G+   M  R GD
Sbjct: 162 YNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGD 214

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------DFD----------F 439
              L  V++E+    ++ M   +   EL                  DF           +
Sbjct: 215 VTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKSSW 274

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +V  QS+ +   ++QY +AR  S+            F     N        +   + ++
Sbjct: 275 DRV-FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSIL 324

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            HL  +  V+  ++   +P  +  YL  L+ +              + ++ +  ++   R
Sbjct: 325 QHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHL---------AAVAHKTLKDSPPEVAGAR 375

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  AV S++ +G+ ++G+     M
Sbjct: 376 LHLFKAVRSVLANGMKLLGITPVCRM 401


>gi|73973438|ref|XP_867856.1| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 3 [Canis
           familiaris]
          Length = 403

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/446 (17%), Positives = 157/446 (35%), Gaps = 77/446 (17%)

Query: 173 QINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEK 228
           Q   L        Y++ L ++        Y  V  +    +   K + E    L   + +
Sbjct: 2   QFGLLGTGFQLFGYEEKLQSSPLQHLFEVYVQVNKEAADDKNVAKSAHEFFQRLELGDTQ 61

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L + + +   ++ + +R   K L +  D +  E  F+R      ++++  L  +G + +
Sbjct: 62  ALALWQKFRDLSIEEYVRV-YKRLGVHFDEYSGES-FYREKS---QEVLKLLDSKGLLQK 116

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER 347
            I      K T   D+            GD      L++SDG+  Y   DLA    + ++
Sbjct: 117 TI------KGTAIVDLSGN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDK 161

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV       + +++  +   +    A       E  +    G+   M  R GD
Sbjct: 162 YNFDTMIYVTDKGQKKHFQQVFQMLQIMGYDWA-------ERCQHVPFGVVQGMKTRKGD 214

Query: 407 FITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDF 439
              L  V++E                           VG  ++              F +
Sbjct: 215 VTFLEDVLNEIRLRMLQNMASLKTTKVLENPQETAERVGLAALIIQDFKGLLLSDYQFSW 274

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +V  QS+ +   ++QY +AR  S+            F     N        +   + ++
Sbjct: 275 DRV-FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSIL 324

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            HL  +  V+  ++   +P  +  YL  L+ +            +  +V+ +  ++   R
Sbjct: 325 QHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHL-------AGMAHKTLYVKDSPPEVAGAR 377

Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585
           L L  AV S++ +G+ ++G+     M
Sbjct: 378 LHLFRAVRSVLANGMKLLGITPVCRM 403


>gi|326429873|gb|EGD75443.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 751

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 105/572 (18%), Positives = 193/572 (33%), Gaps = 118/572 (20%)

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
           V  G    R+  G    V +E+ S N   P H GH R  ++G+ LA++ A +G  V R  
Sbjct: 206 VTQGSNLDRDQGGGAPVVVVEYSSPNIAKPFHAGHLRSTIIGNVLANMYAAAGARVVRAN 265

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV---------------- 209
           Y+ D G QI  +AL  F RY          L   +   VY++                  
Sbjct: 266 YLGDWGRQIGLVALG-FERYGSRAKLETHGLA--HLLDVYVRANEVVEEEEQAARARGDS 322

Query: 210 -GKEL--ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
            G EL    K  +  L   ++  L   + ++ Q+M+         L ++ D    E    
Sbjct: 323 GGSELLAEAKLFAHRLELGDDAALRTWRTFTAQSMVA-CDVLYDRLGVRFDEMDRESS-- 379

Query: 267 RGDPSPIRDIIDNLA----------------------------------------RQGYV 286
               +  ++++  L                                         R    
Sbjct: 380 --HVARAKEVVRLLEAHDGGVANGVDGVGGVGGGDGDDGVGGVGGVGGGDDVGGHRSAVS 437

Query: 287 YEGILPPPKSKTTQKCDMDRK----QLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYF 341
                     +   + + +        +F +    +     +L KSDG+ TY + DL   
Sbjct: 438 CVDAATVQTHQRPPRVEREDNGALVAHVFGADGSSETASHVVLEKSDGTTTYMSRDLGAI 497

Query: 342 KCKYE-RGFDNMIYVMGSDHSGYVKR---------------------LEAVAAAVSEKKA 379
             +++   FD  +YV+  + + + K+                        +   +S +K 
Sbjct: 498 LDRHDALRFDKHLYVVAYEQALHFKQLLVLLSSVPGGQGVASRCEHISYGLVTGLSTRKG 557

Query: 380 QINVLLCELVRLYRDGMPIKM---SKR---AGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            + +LL E++   ++ M  ++   S R   +GD  T   V D +   S+    L  K  +
Sbjct: 558 NV-ILLEEILDAAKEQMLQRLQQDSSRVAGSGDDPTAEAVADMLALSSLVVQDLRSKRVK 616

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F + ++ +    +   ++QY + R  SI R            + P      +     
Sbjct: 617 NYQFSWQRMLDA-HGDTGTFLQYTHVRLASIQRVNP---------VSPCTDAVDDISTSP 666

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
               ++  LA+   ++  A  A EP  L  YL  L+             P +R V+    
Sbjct: 667 HSQAVLHLLAQKQDILAAAVRANEPAVLVQYLLQLSRAVSS------ALPHVR-VKGAPE 719

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +   R+ L  A    +  GL ++G+   + M
Sbjct: 720 MVARERMALFTAARHTLAQGLELLGLAPLDRM 751


>gi|330807100|ref|YP_004351562.1| arginine--tRNA ligase (arginyl-tRNA synthetase), C-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375208|gb|AEA66558.1| Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), C-term
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 332

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 126/342 (36%), Gaps = 63/342 (18%)

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           + E  ++      + +++++L  +G + E       S   Q   +D+ +     T  G+ 
Sbjct: 12  MGESAYN----DDLINVVNDLKAKGMLVE-------SNGAQCVFLDQFK-----TADGEP 55

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           +   ++K+DG Y Y   DLA  + +      D ++Y +    + + +++  VA       
Sbjct: 56  LPVIIVKADGGYLYATTDLAAVRYRNSVLKADRVLYFVDQRQALHFQQVFEVARLAGFVT 115

Query: 379 AQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416
             + +       +   DG P K   R G  + L  ++ E                     
Sbjct: 116 RPMEMEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLTEAQDRAYTLVKGKNPELAEDEL 173

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 VG D+V++  L +  +    F+F  +    + N   Y+ YAY R   +FR+   
Sbjct: 174 RKIAKVVGIDAVKYADLSKHRTSDYSFNFDLMLNF-EGNTAPYLLYAYTRVAGVFRKLGK 232

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
            F ++D  +               E +L   LA++  V+ N      P+ L  YLYD+A 
Sbjct: 233 SFNEVDGQIVLEA---------PHEQELAAKLAQFGEVLNNVADKGTPHTLCAYLYDVAG 283

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +F   + +         + A   +    RL+L       +  
Sbjct: 284 LFSSFYENC------PILNAQTPEQMQSRLRLAALTGRTLKQ 319


>gi|126654469|ref|ZP_01726200.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589066|gb|EAZ83286.1| arginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 314

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 137/361 (37%), Gaps = 74/361 (20%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L I  D +  E  ++      + +++  L  +G + E       S+     +M+      
Sbjct: 1   LGINFDEYTGEAFYN----DKMTEVVTELQSKGLLIE-------SEGAFVVEMEG----- 44

Query: 312 RSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEA 369
                   +   L+ K+DG+  Y   DLA    + +    + + YV+G++ + + K+L  
Sbjct: 45  --------MPPCLITKTDGATLYATRDLAAAFYRQQQYQPNKIFYVVGNEQTLHFKQLFQ 96

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416
           V   +    A+ ++       + +DG   KMS R G  + L  V+ E             
Sbjct: 97  VIEKMGYSWAK-DLQHVPFGMMLKDGK--KMSTRKGKVVLLADVLAEAIATAKRNIEDKN 153

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       VG  +V F  L       ++F   ++     E    YVQY YAR  SI
Sbjct: 154 PYLQQKERVAQQVGVGAVIFNDLKYHRLNDIEFSIEQMMNFEGE-TGPYVQYTYARICSI 212

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
             +               + I   +        +I+ L ++P+V++ A    +P  +A Y
Sbjct: 213 LAKGDV-----------PSHIKTFAPLGQHAWPIILLLEQFPKVVDTAFNQADPSIIAKY 261

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              LA + + ++++ +           +      RL L H VA ++   L ++G+ESP  
Sbjct: 262 ALQLARLLNKYYANQKILT--------DDAQQASRLALCHCVAIVLKESLALLGIESPEN 313

Query: 585 M 585
           M
Sbjct: 314 M 314


>gi|119568971|gb|EAW48586.1| arginyl-tRNA synthetase-like, isoform CRA_c [Homo sapiens]
          Length = 441

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/478 (17%), Positives = 162/478 (33%), Gaps = 103/478 (21%)

Query: 173 QINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEK 228
           Q   L        Y++ L +N        Y  V  +    +   K + E    L   + +
Sbjct: 2   QFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQ 61

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L + + +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G + +
Sbjct: 62  ALSLWQKFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLK 116

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER 347
            I      K T   D+            GD      +++SDG+  Y   DLA    + ++
Sbjct: 117 TI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDK 161

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             FD MIYV       + +++  +   +    A       E  +    G+   M  R GD
Sbjct: 162 YNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWA-------ERCQHVPFGVVQGMKTRRGD 214

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSEL---------------------------LDFDF 439
              L  V++E+    ++ M   +   EL                             F +
Sbjct: 215 VTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDFKGLLLSDYKFSW 274

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +V  QS+ +   ++QY +AR  S+            F     N        +   + ++
Sbjct: 275 DRV-FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACLQEPQSVSIL 324

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDL---------------------ASVFHGH--- 535
            HL  +  V+  ++   +P  +  YL  L                     A  F      
Sbjct: 325 QHLLRFDEVLYKSSQDFQPRHIVSYLLTLRWCLALLSRLERDLGSLQPPPAG-FKRFSCL 383

Query: 536 -------WSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                  +SH      +   ++ +  ++   RL L  AV S++ +G+ ++G+     M
Sbjct: 384 SLPSSWDYSHLAAVAHKTLQIKDSPPEVAGARLHLFKAVRSVLANGMKLLGITPVCRM 441


>gi|331009577|gb|EGH89633.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 259

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 102/277 (36%), Gaps = 47/277 (16%)

Query: 338 LAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDG 395
           +A  + + +    D ++Y +    + + +++  VA         + +       +   DG
Sbjct: 1   MAAIRYRSKVLKADRVLYFVDQRQALHFQQVFEVARRAGFVHDGMQLEHMGFGTMNGADG 60

Query: 396 MPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLW 428
            P K   R G  + L  ++DE                           VG  +V++  L 
Sbjct: 61  RPFK--TRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEVELRSIAKAVGISAVKYADLS 118

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
           +  +    F+F ++    + N   Y+ YAY R   +FR+         FD     ++   
Sbjct: 119 KHRASDYSFNFDQMLSF-EGNTAPYLLYAYTRVAGVFRKLG-----TPFDASKGQIVLAA 172

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
                 E +L   LA++   + N      P+ L  YLYDLA +F   + +         +
Sbjct: 173 ----PQEQELAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENC------PIL 222

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            A N      RL+L       +  GL+++G+E+   M
Sbjct: 223 GAENPDQQQSRLRLAALTGRTLKQGLDLLGLETLERM 259


>gi|312374379|gb|EFR21944.1| hypothetical protein AND_15986 [Anopheles darlingi]
          Length = 612

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/446 (17%), Positives = 158/446 (35%), Gaps = 69/446 (15%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
                   + +EF S N   P H GH R  ++G+ +A++  F G  V R  Y+ D G Q 
Sbjct: 37  TSPKGSQTIVVEFSSPNIAKPFHAGHLRSTIIGNFIANVNEFLGQRVVRLNYLGDWGTQF 96

Query: 175 NTLALSVFWRYQQALYNNDSDLP---EGYYPGVYLKHVGKELADKYSSELLNFPEE--KW 229
             LAL V  +    +    + +    E Y           ++ +          +   + 
Sbjct: 97  GYLALGVRLKGLSPVEIQQNPILCLYEAYVHAHDCASNDPKIHETAMDIFSQMEKGSMEE 156

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L    DY     +  +    + L ++   +  E  +       I ++++ L  +G + E 
Sbjct: 157 LQQWNDYR-SYTVNELEALYRRLGVRFSTYEWESQY---AMGKIAEVLEILRDKGGLQE- 211

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348
                +S   +   + + + +            PL+KSDG+  Y   D+A    + +R  
Sbjct: 212 -----QSDQRKVVHLSKGRTV------------PLVKSDGTGMYLLRDIAALLDRQKRYA 254

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           F   +YV+ +  + +   L  +A ++      +N+   + +   + G    MS R G  +
Sbjct: 255 FQRSLYVVENGQNDHFSALREIAHSI------LNLPYAQSIEHIKFGRVHGMSTRQGKVV 308

Query: 409 TLRHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440
            L+ ++ E                            +G+ +V    L ++  +  DFD+ 
Sbjct: 309 FLKEILHEAQLLVQEKQIESPNTKKSAVDNPEVWDILGTSAVIINDLKQRRMKDYDFDWS 368

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           KV  + + +    +QY + R  S+ R ++                      +     LI 
Sbjct: 369 KVL-RMEGDSGIKLQYTHCRLASLLRSSQTTHD------LGCTECDGRLLVEPEACDLIC 421

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLY 526
            +A +  V   A    E   +  YL+
Sbjct: 422 QIANFEPVCSQAQELSEACIVVNYLF 447


>gi|310799638|gb|EFQ34531.1| arginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 637

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 107/629 (17%), Positives = 206/629 (32%), Gaps = 88/629 (13%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70
            ++Y+ +I  +I      +    I+     + G L+     +  +  G      A  ++ 
Sbjct: 38  FRSYIAQIVAEISGCDPAVAYDAIQSTAAISMGDLAVILPRLKIKAKG----DAAAELLE 93

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGK 119
           +    P     FI G   I ++  P +L +++   +V            G+    +    
Sbjct: 94  KFPKSPLYTFPFIDGVH-IRIFSHPFFLPRLVVPFIVDRKELYGADDSYGLRDASSPESG 152

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV +EF S N        H R  + G ++A+L    G++V R  ++ D G  I  LA+
Sbjct: 153 RKKVVVEFSSPNIAAEFEGRHLRSTINGASIANLHERMGWDVVRLNFLGDWGKNIALLAV 212

Query: 180 SV--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----------E 227
               F   ++   +    L + +     L    +E + K   E  N  E          +
Sbjct: 213 GWNKFGSEEEFSKDPIRHLLDIHNQINELFKPEQEASLKAKDEGKNTAEIESQGIYAERD 272

Query: 228 KWLPIVKDYSVQA------MMKIIRDD----LKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +   +++    A         +  +D       L I+ D +  E          I ++ 
Sbjct: 273 AFFKRMEEGDADAVALTTRFRDVYVEDYTKAYARLGIKFDEYAGESQV---TSESIAEVE 329

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             L  +G            ++     +D K+   +    G   +R      G+  YF+ D
Sbjct: 330 SLLKDKG---------ISEESDGSWLIDFKKHGAKGLGTGMIRNRT-----GTTMYFSRD 375

Query: 338 LAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVL---------- 384
           LA    +  +  FD MIYV+ ++   + + +      +       +I  +          
Sbjct: 376 LAAILDREKQYAFDKMIYVVNAEQDSHFRGVIKALELMGRDDLSKKIQHVNFGKVQGLSS 435

Query: 385 -------LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                  L +++    + +   MS    +        +  G  S+    +  K +    F
Sbjct: 436 QLGNANLLGDMLNQCANAVKDAMST-EQNSGAPLAAAEPFGITSLIAQDMHTKRANGYAF 494

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D  K+ E   E     +Q  Y R     +       +L  D      +      +     
Sbjct: 495 DSKKMTEFEGE-TGAALQLHYTRLCLTIK-------ELGVDPTALEEVDYSHLEEEEYTN 546

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV----FHGHWSHGRENPRLRFVQANNR 553
           L+  +A+YP V+  A    EP  +  YLY LA               E        A N 
Sbjct: 547 LLRLMAQYPDVVNAAYKTLEPSAVLTYLYRLAEQIVVCLDDDEGGDEEGEGEEEETAENP 606

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESP 582
           K  + R  L      +  +G+ ++G+   
Sbjct: 607 KADLARAVLYENARQVFENGMRVLGINPL 635


>gi|311244153|ref|XP_003121337.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 380

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 146/395 (36%), Gaps = 73/395 (18%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           + L   + + L + + +   ++ + IR   K L +  D +  E  F+R      ++++  
Sbjct: 30  QRLELGDAQALALWRKFRDLSIDEYIRI-YKRLGVHFDEYSGES-FYREKS---QEVLKL 84

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADL 338
           L  +G + + I      K T   D+            GD      +++S+G+  Y   D+
Sbjct: 85  LDSKGLLQKTI------KGTAVVDLSGN---------GDPSSVCTVMRSNGTSLYATRDI 129

Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A    + E+  FD MIYV       + +++  +   +    A+  + +         G+ 
Sbjct: 130 AAAIDRMEKYNFDEMIYVTDKGQKKHFQQVFQMLHIMGYDWAERCLHVPF-------GVV 182

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL----------------------- 434
             M  R GD   L  V++E+    ++ M   +   EL                       
Sbjct: 183 QGMKTRRGDVTFLEDVLNEIRLRMLQNMASIKTTKELENPQETAERVGLAALIIQDFRGL 242

Query: 435 ----LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                 F + +V  QS+ +   ++QY +AR  S+            F     N       
Sbjct: 243 LLSDYQFSWDRV-FQSRGDTGVFLQYTHARLHSLEE---------TFGCGYLNDFNTACL 292

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +   + ++ HL  +  V+  ++   +P  +  YL  L+ +            +   ++ 
Sbjct: 293 QEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHL-------AAVAHKTLHIRN 345

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  ++   RL L  AV S++ +G+ ++G+     M
Sbjct: 346 SPPEVAGARLHLFRAVRSVLANGMKLLGITPVCRM 380


>gi|167518127|ref|XP_001743404.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778503|gb|EDQ92118.1| predicted protein [Monosiga brevicollis MX1]
          Length = 586

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/507 (17%), Positives = 170/507 (33%), Gaps = 90/507 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               +EF S N   P HVGH R  ++G+ L +++  +G  VT   Y+ D G Q+  + + 
Sbjct: 116 RHTLLEFSSPNIAKPFHVGHLRSTIIGNALRNILEATGERVTAINYLGDWGRQLALVMIG 175

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----------ELLNFPEEKWL 230
                     +  S       PG++        A+K +           +L    E+  +
Sbjct: 176 QDLLASDGTTSAGSSAGSNAPPGLHDLFRAYVAANKAAEADPTILQRARDLHRELEQALV 235

Query: 231 PIVKDYSVQAMMKIIRDD--------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                + +    + +R D         +AL+++ D +  E ++  G     R + D L+ 
Sbjct: 236 AGDAQHPLLNRWRALRSDSIDAYEHIYRALHVRFDAYEGESNYVPG----ARSLGDRLSA 291

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                                +D    +       D     L K+DGS TY   DLA   
Sbjct: 292 ----------------LPGARVDHGAWV---ADFADLPTCVLQKADGSSTYLLRDLAAAL 332

Query: 343 CKYE--RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
            +     G D  IYV G     + K+L+A+ AA+   +    +           G+   M
Sbjct: 333 ERAARPEGPDRTIYVAGGAQDVHFKQLQALLAAMGRSEVATGLQHVGF------GLIKGM 386

Query: 401 SKRAGDFITLRHVVDE----------------------------VGSDSVRFMMLWRKNS 432
           S R G  + L  ++ E                            +   ++    L  +  
Sbjct: 387 STRQGTVVFLDDLLRETEFHMSQVLSLNPQKLRELDDQAGTTQMLALSAIVVQDLRARRH 446

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           +  +F + ++   +  +    +QY +AR  S+ RQ+      LD        +      D
Sbjct: 447 KDYEFHWQRMLS-TTGDTGTLLQYTHARLASLERQSG-----LDTGAISVADLQLTHVID 500

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                L   +++    +  A    +P  L   +  +A                 +VQ   
Sbjct: 501 DEMHALAFEVSKLEPTVVKAAEDLDPSILLQQVLRIA-------RAANAAHAAHYVQGQP 553

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579
             +   RL +  A    +  GL+++G+
Sbjct: 554 APVAQARLAVYAAARCALAHGLSLLGL 580


>gi|327305635|ref|XP_003237509.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326460507|gb|EGD85960.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 576

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 104/617 (16%), Positives = 209/617 (33%), Gaps = 108/617 (17%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-LDPLTIAELIV 69
           L+  L+ ++    +  ++    VI  P D       +  A I+ + +  ++P  +A+ I 
Sbjct: 9   LEALLQFLEVSTPIP-QLPRANVISTPTDI----YRSYIAEIIQKLVKGVNPKQLAQDIA 63

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129
           ++    P +    IA   FI +  SP+ L  ++   +     +        T + I+   
Sbjct: 64  SKFPSTPLLTPP-IANGIFIPISFSPATLPNLILPFIFRPPRFIWVKPVSRTSLFIDL-- 120

Query: 130 ANPTGPMHVGHCRCAV---VGDTLASLM----------------AFSGYEVTREYYINDA 170
                 +     R  +     + L  L+                 F   +V R    ND 
Sbjct: 121 ------LLRREQRVNLCVYFKEVLQRLLCKKLFRSKSLPAYCNMEFL-CDVWRRELNNDL 173

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                 LA ++ +   +    + S++                       + +   + + +
Sbjct: 174 -----FLAGALVFGITEDRGEDKSEIESKGLFAERNAFF----------QKMEDEDAEAI 218

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + K +   ++ + I      LNI+ D +  E        S +      L  +G      
Sbjct: 219 TLWKRFRDVSIERYIS-TYARLNIKFDAYSGESTV---KASTVEKAESLLKEKG------ 268

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
               +   T   D  +      +  +G  V R  +   G+ TY   D+A    + E+  F
Sbjct: 269 -VYTEDNGTWIIDFKKHG----APNLGVAVARTRI---GTTTYLLRDIAAALERVEKYQF 320

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQINVL-----------------LCELVR 390
           D MIYV+ ++   Y +RL      +S     A++  +                 L +++ 
Sbjct: 321 DKMIYVVSTEQDLYFQRLFKTIELMSYTDVAAKLEHVNFGKVMGMSSRLSTVKILSDILD 380

Query: 391 LYRDGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                M   M K    +  +     V D +G  +V    +  K      FD  K+    +
Sbjct: 381 ECGSAMHDVMRKNPTKYEQIENPTEVSDTLGITAVMVQDMTGKRIHNYTFDIAKMTSF-E 439

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +   Y+QYA+AR  SI R+       +D D             +   + ++  +A+   
Sbjct: 440 GDTGPYLQYAHARLCSIVRK-------VDIDPKEITNANFSLLKEQHAINILRLMAQ--- 489

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           V  NA    EP  +  YL+ LA      +        ++ + A +  +T+ RL L     
Sbjct: 490 VTSNAVKTLEPTTILTYLFRLAHQISSGYD------VIKVIGAESHDVTVARLALYEGAR 543

Query: 568 SIINSGLNIIGVESPNE 584
            ++ +G+ ++G      
Sbjct: 544 QVLKNGMRLLGFTPVKR 560


>gi|145631016|ref|ZP_01786792.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983483|gb|EDJ90959.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 260

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 110/278 (39%), Gaps = 22/278 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + +  S ++K  +         +       ++ +      G    N  M  ++ LGL+
Sbjct: 1   MNIQSILSDKIKQAMVIAGADQSCDA------LVRQSGKPQFGDYQANGIMAAAKKLGLN 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P   A+ ++  +++    + + IAG GFIN++L+P++L   +S+ +       +      
Sbjct: 55  PREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNK 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N    MHVGH R  ++GD +A  + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +     +     +    E +Y            A K+  E   F E+    +VK      
Sbjct: 173 LEKMQNEHASEMELQDLEAFYRE----------AKKHYDEDEIFAEKARNYVVKLQGGDE 222

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             + +   L  + +Q +      ++ R + +     + 
Sbjct: 223 YCRAMWKRLVDITMQQNQH----NYDRLNVTLTEKDVM 256


>gi|71033807|ref|XP_766545.1| arginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353502|gb|EAN34262.1| arginyl-tRNA synthetase, putative [Theileria parva]
          Length = 639

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 101/576 (17%), Positives = 196/576 (34%), Gaps = 105/576 (18%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+ L   Y+   L+ +  S       L  +   V +++ S N    +H+GH R   +G 
Sbjct: 88  LNIKLRDEYIIDQLNLMSESDRLNVGKLTDE--TVLVDYFSPNVGKNLHMGHIRSLGIGQ 145

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFW---RYQQALYNNDSD---------- 195
            +++L+ FSG +V R  ++ D G     +   +     R  +AL     D          
Sbjct: 146 AISNLLHFSGSKVIRRNHVGDFGLHSGIIMRYIIEYDTRAMEALNPATCDSVRLRETTRQ 205

Query: 196 ----------------------LPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPI 232
                                  P   Y  V        +LA +  S    F +   +  
Sbjct: 206 LVAGFSPLNFSHDYNVKNLTLPYPTFAYGLVLETMDDYYKLAFEKFSSDQEFAKRAKIET 265

Query: 233 V-----KDYSVQAMMKIIRDDLKALNIQHDIFIS-------EDDFHRGDPSPIRDIIDNL 280
                 K ++      + +  L   N   D F         E  +       I ++I + 
Sbjct: 266 CLLQNEKSFAFPQWQNVTKVSLAKYNDLLDYFYIKGLKNIPESLYKNVTNRFINELIKDN 325

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFA 335
             +    E +   PKS  T       +      +  G     +D    L+  +GS TY +
Sbjct: 326 QVKQNDKEVVYTIPKSSKTDDNTDSTENTRNSDSAEGVGVKNEDKT-VLITREGSLTYMS 384

Query: 336 ADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            DL     +      D +IYV  ++   + K      +   +   +  +      ++  +
Sbjct: 385 TDLGALSYRVNWHKPDRIIYVTENNQKSHFK-KLYKISKKLKLLKKCKMEHVGFGQICLE 443

Query: 395 GMPIKMSKRAGDFITLRHVVDEV--------------------------GSDSVRFMMLW 428
           G   K+  R G+  TL  +  +V                          G  S+ F  L 
Sbjct: 444 GSG-KIRSRTGNTCTLDDITRQVVKLVTDHMVKRGDYLQLKSPVLSRKIGVGSILFSDLS 502

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            +     +F   ++  Q   N +  + Y+Y RC+SI ++ +               IP  
Sbjct: 503 VEPKSGYNFSIERLMNQ-GYNLLISILYSYVRCQSILKRCE-----------SLPQIPSN 550

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
              +  E +L + L  +  +I  +   +EP+++  YL +L+  F+  +           V
Sbjct: 551 EFRNEYERKLGLVLLGFENIIATSISLREPHRVCKYLTNLSREFNQFYEKT-------PV 603

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
            A+++  ++  L+LV   +  I  GL I+ +++   
Sbjct: 604 IADDKVNSLS-LKLVKITSRAIEIGLGILNIQTVKR 638


>gi|302800117|ref|XP_002981816.1| hypothetical protein SELMODRAFT_421269 [Selaginella moellendorffii]
 gi|300150258|gb|EFJ16909.1| hypothetical protein SELMODRAFT_421269 [Selaginella moellendorffii]
          Length = 855

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 105/564 (18%), Positives = 191/564 (33%), Gaps = 129/564 (22%)

Query: 35  ERPRDCAHGHLS--TNAAMIL-SRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGK 86
           ER R   +G  +  +N AM + SR  G+     +P+++A+ ++  I      +   +AG 
Sbjct: 406 ERTR-PENGLYTIESNNAMGIWSRIKGMQSTYGNPVSLAQDVLRNIPRTSMFEKSSVAGA 464

Query: 87  GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           G+             L ++   G++     +       ++F S N    +HVGH R  V+
Sbjct: 465 GY------------ALGTLHCRGVDTVAPEL-PVKHALVDFSSPNIAKELHVGHLRSTVI 511

Query: 147 GDTLASLMAFSGYEVTREYY---INDA-GAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
           GD++A ++ F   +   E     + +A   Q   L   +F    + +Y   S+  +    
Sbjct: 512 GDSVARMLEFCNVKCHAEKPCRRLGNADLLQFGMLLEHIFETDAEKMYIEASERFKSDEQ 571

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
            + L+    E   K    L +  E+ +L                    A       F   
Sbjct: 572 FIKLQRSEAEYHAK-WKSLCDIDEKSFL----------------LSCMARAFIIHTFSML 614

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                              ++G + E                D  +++F   + G D+  
Sbjct: 615 SSLS--------------KKKGLLQES---------------DGARVIF---LEGYDIPL 642

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
              K      + A  LA +    E GF        + H G+                   
Sbjct: 643 IGQKQHFDMFFQATKLAGWL--PEHGFPK------AQHIGF------------------- 675

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFC 440
                 + L  DG   ++  R G  +   +++D+  S S + +   L         FDF 
Sbjct: 676 -----GMVLGEDGK--RIRGRKGGVL-PANMLDDAKSRSHKELVRDLKNNRKTNYRFDFE 727

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++    K N   Y+ YAYAR  SI R++     ++           +       E  L +
Sbjct: 728 QMLN-IKGNTAVYLFYAYARVCSIIRKSGRSIDEI-------KQTCELVVEHPHERSLRL 779

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           HL ++   +E++     P  L  YLY L+ +F   ++  +    L+            RL
Sbjct: 780 HLIQFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCKVTRSLQ---------EASRL 830

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L  A   I   GL ++G+     
Sbjct: 831 LLCEATRLITKQGLELLGLTPLER 854


>gi|320587966|gb|EFX00441.1| arginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 633

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 89/544 (16%), Positives = 175/544 (32%), Gaps = 86/544 (15%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
                G++          KV +EF S + +   +  H R  +VG  +A+L    G++V R
Sbjct: 110 QETSHGLKDPLAPEKGRKKVVVEFSSPSVSIDFNDTHLRSTIVGSFVANLYECMGWDVVR 169

Query: 164 EYYINDAGAQINTLALSVF-WRYQQALYNND--------SDLPEGYYPG----VYLKHVG 210
             Y+ D G  I  LA+    +  + AL  +         S + E + P        K  G
Sbjct: 170 LNYLGDWGKPIGLLAVGWQRYGSEDALKEDPIGHLFDVCSKISEDFKPEQQASKKAKEDG 229

Query: 211 KELADKYSS----------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
            + A               +++   +E+ L + K +    +  +     K + ++ D ++
Sbjct: 230 LDTAGIEGQGIYAERDAFFKMMEEGDEEALALWKQFRDITISDLESA-YKRMGVRFDEYV 288

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            E       P  + ++   L  +G + E                     + R        
Sbjct: 289 GESQV---KPETMAEVEAVLKEKGVLEESNGSWIIDFPKHGGKKGLGIAIIRGRT----- 340

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375
                   GS TY   D+A    +    GFD M+YV+      +  ++      +     
Sbjct: 341 --------GSSTYLLRDIAAVIDRERAYGFDKMLYVVSIRQETHFSKIFTALDLMGRSDL 392

Query: 376 -------------------EKKAQINVLLCELVRLYRDGMPIKMSKRAGD---------F 407
                              +    +  +L +  +L RD M        G           
Sbjct: 393 LDKLQHVSIGRIQGISERIKDAHTLGAILDQSAQLIRDAMATGKETSHGGESGTPPAEEV 452

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    V D +   ++    +  K      FD  ++      N    +Q ++ +   + R+
Sbjct: 453 VAAVAVGDSITVGALFGQDMAHKRISSSVFDVRRMASLD-GNTGQGLQASHTQLALVIRK 511

Query: 468 AKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            K+      + D  P      +S      + L+  +A+YP V  +A  + EP+ +  YLY
Sbjct: 512 LKEQIAGTPETDQAPPE---YDSLQKNEAVDLLRLMAQYPDVTTSAFRSLEPHAILSYLY 568

Query: 527 DLASVFHGHWS------HGRENPRLRFVQANNRKL--TMMRLQLVHAVASIINSGLNIIG 578
            L    H   +       G + P           +      L L      ++ +GL ++ 
Sbjct: 569 RLNDAIHSCINPSDGEEEGGDAPTEAASTVEPESVGEQKAFLSLYENACQVLENGLQLLS 628

Query: 579 VESP 582
           + + 
Sbjct: 629 IPTV 632


>gi|307211858|gb|EFN87805.1| Probable arginyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 391

 Score =  195 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/437 (16%), Positives = 151/437 (34%), Gaps = 93/437 (21%)

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------------KWLPIVKDYSV 238
           ++ ++ +     +Y+ +V      +    +L    E             +   + K Y+V
Sbjct: 5   DEDEMKKSPIKALYIAYVTANKLAETDPSVLERAREIFNDLETGAGVTGEQWKVFKQYTV 64

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +    +     + +  D +  E  +       I  +++ +                  
Sbjct: 65  EEL----KQIYGRIGVTFDEYHWESMYSAKSMDKIIKLMEKMQ----------------- 103

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMG 357
               D   ++++     +G+  + P++KSDGS  Y   D+A    ++ER  FD M YV+ 
Sbjct: 104 LLTTDEQNRKII----NLGNGKNIPVIKSDGSTLYITRDIAAAIDRFERNNFDCMYYVVD 159

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--- 414
           +  +G+   L  +   +            E ++  R G    M  R G+ + L  ++   
Sbjct: 160 NTQAGHFSNLLEILKQMEIPWV-------ERLKHIRFGRIHGMRTRKGNVMFLEDILNTA 212

Query: 415 -------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                    D +G  ++    L +       FD+       K N
Sbjct: 213 RDTMKQRQLDSPTTKVPMNLTDNSSDILGISAMMINDLKKDRQRDYTFDWD-AAFDLKGN 271

Query: 450 PVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               +QY + R  ++ R    I   + +  L    V+            LI+ +A++  V
Sbjct: 272 TGVKLQYTHCRLVNLERNCGAILTSECEPSLLQEEVVD----------DLILLIAKFDEV 321

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           I  +    EP  L  YL+ L++  +  +   R       V+     +   RL L H   +
Sbjct: 322 ILKSYKEMEPCVLTAYLFKLSNTVNRAFKTLR-------VKDEPTDVASQRLLLFHVAKN 374

Query: 569 IINSGLNIIGVESPNEM 585
           ++  G+ ++G+    +M
Sbjct: 375 VLAQGMRLLGLTPLEKM 391


>gi|302884104|ref|XP_003040949.1| hypothetical protein NECHADRAFT_54509 [Nectria haematococca mpVI
           77-13-4]
 gi|256721843|gb|EEU35236.1| hypothetical protein NECHADRAFT_54509 [Nectria haematococca mpVI
           77-13-4]
          Length = 619

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/514 (16%), Positives = 177/514 (34%), Gaps = 79/514 (15%)

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
           +  G+   +       K+ IEF S N     +  + R  ++G+ +A+L    G+EV R  
Sbjct: 125 LSQGLRDAKEPKKGKKKIVIEFSSPNVATGFNGNNLRSTLLGEFIANLYEAMGWEVVRLN 184

Query: 166 YINDAGAQINTLALSVFWRYQQALYNND---------SDLPEGYYPGVYLKHVGKE---L 213
           Y+ D G  +  LA        +     +         + + E + P    K   K+    
Sbjct: 185 YLADWGKHVGLLAAGYKRFGSEKKLQQERSIHLLDVYAQMNELFKPVQDPKGKAKQGEGC 244

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMM----------KIIRDDLKALNIQHDIFISED 263
           A     + +    ++    ++D   +A+           + +R + + L I  D +  E 
Sbjct: 245 ASPVEDKTIALERDEIFKKMEDGDDEALRQSSHFRGITIEDLRAEYQRLGITFDEYSGES 304

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                 P+ I  + + L  +G + E           +   +D      + T       + 
Sbjct: 305 QVQ---PATITKVENMLKEKGILTE---------INKLWVID----WVKHTGRKSFSTQV 348

Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK--AQ 380
           +   DG+  Y   D+A    + E+  FD MIYV  S    + +++      +       +
Sbjct: 349 IRGRDGATRYPLRDVAAALEREEKFAFDKMIYVTSSAQDSHFQQVLTALELMGRSDLSEK 408

Query: 381 INVLLCELVRLYRDGMPIKM----SKRAGDFITLRHVVDEV------------GSDSVRF 424
           +  +    ++        +       R  D + + H  D+V               ++  
Sbjct: 409 LQHISFGAMQGLEANSLREFLDNCEARMRDAMNMEHDDDDVDGSAAERITNNAMVGALLA 468

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + +K S    F+  K+   S  +    +Q  Y R  ++  +++             + 
Sbjct: 469 QEMSKKKSHGYTFELKKLTSFSSHS-GPMLQGCYTRLTALINESRAEG-------VASSE 520

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
           I   +  D     L+  +A++P V+  A  + EP+ L  YLY L                
Sbjct: 521 IDYAALKDPDCANLLRVMAQFPEVVAAAYKSAEPHSLLGYLYRL--------------MD 566

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
              +  ++R     RL L      ++ +G+ ++G
Sbjct: 567 SLSLVESSRGEKKARLVLYQNARQVLENGMKLLG 600


>gi|238810261|dbj|BAH70051.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 553

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 104/591 (17%), Positives = 236/591 (39%), Gaps = 62/591 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEK--KILD---RIVIERPRDCAHGH------LSTNA 49
           M +    +  +KN + E+  + K+    K LD   +  ++  R    GH      +  + 
Sbjct: 11  MVIVHKLNKLIKNIVNELKAENKIFSSFKFLDGEKKFSLKMARKTK-GHNNNINHIECDI 69

Query: 50  AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
              L +   +  + +AE I  R+  D  V  V I   G +++ L+   L  +++ ++   
Sbjct: 70  VFQLKKFSFIPYIELAEEIKKRLIKDSMVKDVTIDRYGLLHIVLNEKDLVSVVNEVIKKA 129

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +YG        KVNIE+ SA+P   + + + R A+VG+T+A ++ + GY+VTRE+ +  
Sbjct: 130 YKYG-QEKKNNIKVNIEYTSASPLNSLTLMNARNALVGETIARILEYLGYQVTREFLVYP 188

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              ++  ++  V  +Y      ND+ +         +    K +  +     L+  +   
Sbjct: 189 GLKKMEKVSQIVHEQYVNLFELNDNSIKVD----KDILECAKNIKAQNGDLYLDINDTIK 244

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   V   +   +  LK L +  DI    +D    +   I  +++ L+        
Sbjct: 245 RNKFDLAIVFYFLNKSKKQLKNLGVFFDIVSYFEDILVKE--KIDKVLELLS-------- 294

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                          D    L  +T + D  +R L+  +G+ +Y   D+ Y   K +R  
Sbjct: 295 -----------PFIYDNDSNLILNTNLDDSKERILVHRNGTSSYLLLDIIYHLEKLKR-A 342

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D +I ++ ++H+ Y   L +    ++     I++  CE  ++  +     M+++  + I 
Sbjct: 343 DWIIDILDANHTQYSHSLISALKFLNAYNNNIDIAFCENFQIKENNEVKSMTEKNQNVIF 402

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +V +V  + ++F  L +     +  +   + ++   +   ++   Y +   +  ++K
Sbjct: 403 IDELVKKVNLNEIKFFFLEKSTKHQITIEKEILNQKKISHNFDFILNTYNKINKLLDESK 462

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +     +       +            +LI+ L  +P V+        P+ L  YL ++ 
Sbjct: 463 NNKCYCNKMNQNNFLS-----------KLILRLDYFPYVLRKVIKTLNPFYLTKYLKEMC 511

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            + + +     +     F              ++ AV ++ ++GLN++G++
Sbjct: 512 YLINQNLKDKLKKDYRNFYP------------ILEAVKNVFDNGLNLLGID 550


>gi|308190281|ref|YP_003923212.1| arginine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777675|ref|YP_004137326.1| arginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307625023|gb|ADN69328.1| arginine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038750|gb|ADV34949.1| Arginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 543

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 104/591 (17%), Positives = 236/591 (39%), Gaps = 62/591 (10%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEK--KILD---RIVIERPRDCAHGH------LSTNA 49
           M +    +  +KN + E+  + K+    K LD   +  ++  R    GH      +  + 
Sbjct: 1   MVIVHKLNKLIKNIVNELKAENKIFSSFKFLDGEKKFSLKMARKTK-GHNNNINHIECDI 59

Query: 50  AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
              L +   +  + +AE I  R+  D  V  V I   G +++ L+   L  +++ ++   
Sbjct: 60  VFQLKKFSFIPYIELAEEIKKRLIKDSMVKDVTIDRYGLLHIVLNEKDLVSVVNEVIKKA 119

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +YG        KVNIE+ SA+P   + + + R A+VG+T+A ++ + GY+VTRE+ +  
Sbjct: 120 YKYG-QEKKNNIKVNIEYTSASPLNSLTLMNARNALVGETIARILEYLGYQVTREFLVYP 178

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              ++  ++  V  +Y      ND+ +         +    K +  +     L+  +   
Sbjct: 179 GLKKMEKVSQIVHEQYVNLFELNDNSIKVD----KDILECAKNIKAQNGDLYLDINDTIK 234

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   V   +   +  LK L +  DI    +D    +   I  +++ L+        
Sbjct: 235 RNKFDLAIVFYFLNKSKKQLKNLGVFFDIVSYFEDILVKE--KIDKVLELLS-------- 284

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                          D    L  +T + D  +R L+  +G+ +Y   D+ Y   K +R  
Sbjct: 285 -----------PFIYDNDSNLILNTNLDDSKERILVHRNGTSSYLLLDIIYHLEKLKR-A 332

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D +I ++ ++H+ Y   L +    ++     I++  CE  ++  +     M+++  + I 
Sbjct: 333 DWIIDILDANHTQYSHSLISALKFLNAYNNNIDIAFCENFQIKENNEVKSMTEKNQNVIF 392

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  +V +V  + ++F  L +     +  +   + ++   +   ++   Y +   +  ++K
Sbjct: 393 IDELVKKVNLNEIKFFFLEKSTKHQITIEKEILNQKKISHNFDFILNTYNKINKLLDESK 452

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +     +       +            +LI+ L  +P V+        P+ L  YL ++ 
Sbjct: 453 NNKCYCNKMNQNNFLS-----------KLILRLDYFPYVLRKVIKTLNPFYLTKYLKEMC 501

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
            + + +     +     F              ++ AV ++ ++GLN++G++
Sbjct: 502 YLINQNLKDKLKKDYRNFYP------------ILEAVKNVFDNGLNLLGID 540


>gi|308806864|ref|XP_003080743.1| Arginyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116059204|emb|CAL54911.1| Arginyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 628

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 114/604 (18%), Positives = 218/604 (36%), Gaps = 90/604 (14%)

Query: 62  LTIAELIVARI-------KIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYG 113
             +AE +                +     AG  + N+ L+ P     ++ S    G  +G
Sbjct: 35  RRVAEEVAKEFTAAIEARSERGTIVKCEAAGV-YANMTLNRPMVFEAVMKSAAKQGATFG 93

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
                KG +V IE  S+NP  P+H+G+ R  ++G  LA LM   G+EV   +Y+ND GAQ
Sbjct: 94  HTNAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKLMKACGHEVQEAFYVNDLGAQ 153

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVY-----LKHVGKELADKYSSELLNF---- 224
           I   AL+    Y +       D   G    V      L+ VG++   +Y     +     
Sbjct: 154 IGLTALAYSRVYDKLEPFMKIDHWIGAMYAVMNTCQELQQVGEKGVAEYFDIYQDLRGRF 213

Query: 225 -----------------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                                         +E W   +    V   +  ++  L    +Q
Sbjct: 214 EKIMVVMLADIRTIPDIKVEAGKLNLAYEKQEPWAIKIFRQMVCDCLTGVQQTLSTYGVQ 273

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL----F 311
           HD F  E +   G       +++ +    Y Y            Q   +D    +    F
Sbjct: 274 HDRFDFESEL--GWEGSNDKVLEIMQNSDY-YVPQTQCNDKGVPQGAYLDMAGFITDMGF 330

Query: 312 RSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +    G   + P   +L+ DGS  Y   D+ Y   K     D ++ ++ S+     +++ 
Sbjct: 331 KIGKGGYQKEYPPLYVLRPDGSTLYTYRDIVYSFKKASMS-DLILNIICSEQDLAQQKVA 389

Query: 369 AVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              A ++ + + +   L  +LV+L       KMS R G ++    + +++ +     M  
Sbjct: 390 LAMAMMNPEMEGRQYHLSYDLVKLTTG----KMSGRRGRYLLADDLYEDLKTVIREKMDK 445

Query: 428 WRKNS----------ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
             K              ++FD  K+ +  ++    ++ Y   R  S+ R+ +D       
Sbjct: 446 KYKEKGEDISQEICMTQINFDIAKITDF-EDASAPFILYNSTRLTSVLRKFEDRSSAGVL 504

Query: 478 D-LFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEP----------YKLAFYL 525
           + L P + +      D  E  L++  +  +  +I +A +   P          +++  +L
Sbjct: 505 EKLCPLDDVDFTKLDDDREWALLLDFVLPFAGLIVDAAMPTLPKPPALPSYGMHRVCDFL 564

Query: 526 YDLASVFHGHW--SHGRENPRLRFVQA--NNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             +     G++  +  R  P    + A  N       R+ +      +I++GL ++ +E 
Sbjct: 565 NMMVRALSGYYGPAGVRIMPVQSQLDAGWNETAAMHARIHVCKLFKQVIDNGLRLLMIEP 624

Query: 582 PNEM 585
              M
Sbjct: 625 LERM 628


>gi|88811586|ref|ZP_01126840.1| arginyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88790977|gb|EAR22090.1| arginyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 681

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 120/653 (18%), Positives = 214/653 (32%), Gaps = 109/653 (16%)

Query: 11  LKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL-- 67
           +K  + E   +   E  ++ +  +IER  D   G ++      L R  G  P    +   
Sbjct: 42  VKRRITEALSERWGEGWLIPQFDLIER--DRYGGDIALKFP-QLLREGG--PKVFIQKHL 96

Query: 68  --IVARIKIDPDVD---SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
             IV  +      D    +   G  +INL LS  +L     ++   G  +G N       
Sbjct: 97  PWIVEVLSGSALADVIARIETKGM-YINLTLSDRWLLDSAQAVAEFGDAFGGNDSHSERT 155

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG----------- 171
             +++ S N    +H GH R  ++G  L++L    G  V R  +IND G           
Sbjct: 156 FVVDYSSPNVAKVLHAGHIRSTIIGHVLSNLYEACGALVYRVNHINDFGGFGFTLEGYRR 215

Query: 172 --AQI--------NTLALSVFWRYQQALYNNDSDLP-----EGYYPGVYLKHVGK--ELA 214
              Q           L +    R  + + ++ +        E      Y   VG   EL 
Sbjct: 216 FEEQFPEHVSANERLLEIYRIRRTAERIVDDSTPFEALSADERALLARYFPEVGSTAELT 275

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDLK-------ALNIQHDIFISEDDFH 266
             Y   +         L     + V+   +++   L        ALNI+ D+ I E  + 
Sbjct: 276 ACYREFVAASDARFAALEAGDAHEVELWRRMVGWSLADFEQFYNALNIRFDLIIGESFYA 335

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPP-------KSKTTQKCDMDRKQLLFRSTMVGDD 319
               + +   +       Y                 +    + + D    L R  +    
Sbjct: 336 EAGQALVDACLAAGTAVIYTQALADEDLGALEDKCLAGEITEAERDSLARLIRKDVGAVV 395

Query: 320 VDR------PLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAA 372
           V         + ++DG   Y   DL   + + E     + IYV+G +   +  RL   A 
Sbjct: 396 VPLENGERYVVRRADGRSIYATRDLGAIELRGEIFAPTDSIYVVGQEQQVHFDRLFRAAY 455

Query: 373 AVSEKKA---QINVLLCELVRLYRDGMPI----------------------KMSKRAG-D 406
           AV+       +   L        + G  +                      ++S+RA   
Sbjct: 456 AVALATPERLRFQHLYFGFYVNAKTGKKLSSRDTVANVNHLLAASFEHFRARLSERAEQT 515

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE---QSKENPVFYVQYAYARCRS 463
                    E+   S+ F  L +     ++ D  ++       +++   Y+ Y+  R RS
Sbjct: 516 EDEFDRAAHELAVGSLVFNDLKQDMKTAVEIDATELTATIAAFEKSGGAYMVYSACRARS 575

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+        +           + E D  E  L++ L + P  I  A     P  L  
Sbjct: 576 ILRKYGRKPVPAEQ--------IDDFEIDDQEAVLLLKLQQIPEKIVAAADQSNPAVLVR 627

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
           +L D A++++ ++      P +    AN       RL +  AV   + +GL +
Sbjct: 628 HLLDTAAIYNSYYMR---APVISAGVANP-----ARLLITQAVQQALVNGLRL 672


>gi|124002391|ref|ZP_01687244.1| arginyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992220|gb|EAY31588.1| arginyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 701

 Score =  193 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 139/401 (34%), Gaps = 69/401 (17%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           E+L   E K    V  +        +      KA+ +  D    E + +       +DII
Sbjct: 335 EMLQKWEAKDPETVALWQKMNGWVYEGFDATYKAIGVDFDQMYYESETYLLG----KDII 390

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            +   +   Y                     +  +      D D+ LL+S+G+  Y   D
Sbjct: 391 KDGLEKDLFY---------------TKPDGSVWAKLPKEVSDNDKILLRSNGTSVYMTQD 435

Query: 338 LAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDG 395
           L     KYE    +  IYV+G++   + K L  +   +    A  +  L   +V L    
Sbjct: 436 LGTADKKYEDHTINKSIYVIGNEQDYHCKVLFQILKDLDRPYADGLYHLSYGMVDLPTG- 494

Query: 396 MPIKMSKRAGDFITLRHVVDEV-----------------------------GSDSVRFMM 426
              KM  R G  I    ++ EV                                ++++ +
Sbjct: 495 ---KMKSREGTVIDADDLLAEVKETARKRTDDLGKLDGMSDAEKIEIYRIIALGALKYTL 551

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + + FD  +     + +   +VQ  Y R RSI R+A ++    +          
Sbjct: 552 LRVDPKKRMLFD-KESSVDFQGDAGPFVQMNYVRTRSILRKAAEMGISTNEPW------- 603

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             S+    E +LI  L +Y  V+E A     P  +A Y YDLA  +   ++   E P L+
Sbjct: 604 TVSDLHAMEKELIKLLLQYEAVVEEAGNEYNPSFVAQYAYDLARTYSQFFA---ECPILK 660

Query: 547 FVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               +    +    R+ L      +I   L ++G+E P  M
Sbjct: 661 MDDGSAASIERRKFRIALSTKTGELIKKALGLLGIEVPERM 701



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 102/245 (41%), Gaps = 8/245 (3%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L+N +K+   +  +    +  + ++  R    G   T       + +   P  + +
Sbjct: 1   METTLQNAIKQAFKE--LFDLEVTEVELQPTRKEFEGS-HTFVMFSFLKAVRKRPDELGQ 57

Query: 67  LIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++   +  +  V S   +A KGF+N+ ++         +I  S  +YG+ L  K  KV +
Sbjct: 58  MLGDYLTQNTQVVSGYNVANKGFLNISIANKVWIDTFGNIAQS-SDYGK-LPHKNQKVMV 115

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185
           E+ S N   P+H+GH R   +G ++A ++  +GY+V +   +ND G  I    L+ + ++
Sbjct: 116 EYSSPNTNKPLHLGHLRNNFLGYSVARILEAAGYDVVKANLVNDRGVHICKSMLA-YQKF 174

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +      S +   +  G Y     K++  + +  +    + +   +  D  V  +    
Sbjct: 175 GEGETPESSGIKGDHLIGKYYVEFDKQMKKQVTPIIAKIAKNE-FSLFTDEEVTNIRNYQ 233

Query: 246 RDDLK 250
               K
Sbjct: 234 NKIAK 238


>gi|46107744|ref|XP_380931.1| hypothetical protein FG00755.1 [Gibberella zeae PH-1]
          Length = 1337

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 111/635 (17%), Positives = 207/635 (32%), Gaps = 112/635 (17%)

Query: 14   YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
            YL E   K+    +++    I+       G L    A  L R   ++   +A+ ++ ++ 
Sbjct: 745  YLAETIQKLTNCDRLVAYDAIQTSNVTGMGDL-VVVAPRL-RLKDVNNEDLAKDLLQKLP 802

Query: 74   IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----------GIEYGRNLIGKGTK 122
              P      I     + ++ SP+ L ++    +             G+       G+  K
Sbjct: 803  RLPPF-GCPIRDGIRLQVFFSPNTLSRLSLFYISDRNVSYGYDTSLGLTDPAVPDGQKKK 861

Query: 123  VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            V +E+ S N      V H R  ++G  +A++ A  G +V R  Y+ D G QI  LA    
Sbjct: 862  VIVEYSSPNMASEFQVSHLRSTLLGTYVANIHASMGCDVVRMNYLGDWGKQIGLLAAG-- 919

Query: 183  WRYQQALYNNDSDLPEGYYPGVYLK-------HVGKELADKYSSELLNFPE--------E 227
            WR +    +  +  P  +   V  K        V K  A K + +  +  E        +
Sbjct: 920  WR-RFGSEDEFAKQPLRHLLQVKHKIEELFKPEVEKCKATKANDQDTSEIESQGLYAERD 978

Query: 228  KWLPIVKDYSVQAMMKIIR----------DDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +   ++D   +A+    R          D    L +  D +  E          + ++ 
Sbjct: 979  DFFKKMEDKDPEAIALWQRFRDATVKDLTDSYARLGVTFDEYSGESQV---TSESVAEVE 1035

Query: 278  DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
              L  +G VYE                D  Q+ F            L   +G+ +Y   D
Sbjct: 1036 QALKEKG-VYEEHD-------------DSWQIDFSKHEAKGLSIAVLRYRNGTTSYLLRD 1081

Query: 338  LAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINV----------- 383
            +A    +++   FD MIYV   +   +  R+      +   +   +I             
Sbjct: 1082 VAAVLDRFKAHSFDKMIYVAAMEQEMHFNRVIKTLKLMDRQDLADRIQHTSFAKINGLPE 1141

Query: 384  ------LLCELVRLYRDGMPIKMSKRAGD---FITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                  LL + +   R  +   + +   +     +    VD +G   +     + K +  
Sbjct: 1142 ELKGAELLSDYLDGCRSMVQADLEEEDEEVSHVDSSERSVDILGLAGLFVQDHYHKRNTS 1201

Query: 435  LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
               D  K+     E     +Q  YAR   + ++        D+       +  E   D +
Sbjct: 1202 YTSDAKKMAPLEGE-TGAAIQNCYAR---LLKKLGPEPTTFDYTTLNYTSLESE---DYA 1254

Query: 495  ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN-- 552
            E  L+  L +YP     +  + EP  +  YL  L               +L     ++  
Sbjct: 1255 E--LLRILLQYPDAAHGSFKSLEPSFIVVYLLRL-------------VDQLMVTLDDDDM 1299

Query: 553  ------RKLTMMRLQLVHAVASIINSGLNIIGVES 581
                     +  RL L      +  + L ++GV  
Sbjct: 1300 KDWAGQESASEARLALYENARQVFENALKLLGVTP 1334


>gi|157497158|gb|ABV58323.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria
           immitis]
          Length = 189

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 1/189 (0%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           F      + + L E+  K  +   + +  ++E P + A+G + TN AM+L+R    + + 
Sbjct: 1   FKQIFLLILSKLDELKQKSIINTSV-ENFILEPPSNRAYGDVYTNVAMVLARYERKNSIE 59

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IAE++    ++  ++  V IAG GFIN+        +IL  I     E+G   IG    V
Sbjct: 60  IAEILAEEFELFNEIAKVEIAGPGFINMNFKIEVWHRILKQINELKTEFGTLNIGNNQAV 119

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
           N+EFVSANPTGP+H+GH R A+ GD LA+L+   GY+ T+EYYINDAG QI+ L  SV+ 
Sbjct: 120 NVEFVSANPTGPLHIGHVRGAIFGDVLANLLKKVGYQTTKEYYINDAGTQIDMLIRSVYL 179

Query: 184 RYQQALYNN 192
           RY++AL   
Sbjct: 180 RYKEALGEK 188


>gi|154281911|ref|XP_001541768.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150411947|gb|EDN07335.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 517

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/458 (18%), Positives = 154/458 (33%), Gaps = 91/458 (19%)

Query: 34  IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           I+       G L    A+   +  G  P  +   IV  +     + +  ++G   I  Y 
Sbjct: 60  IQWTNSLDKGDL--VLAVPALQIKGKKPAEVTAQIVENLPPSDLIGTPVVSGTH-IQFYF 116

Query: 94  SPSYLRKILSSIVVS-----------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142
            P  L K + S ++            G+    +      K+ +EF S N   P H GH R
Sbjct: 117 KPEPLTKTVISSILKNRATYGTNANVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLR 176

Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEG 199
             ++G  LA+L    G++V +  Y+ D G Q   LA           Y N+ +L   P  
Sbjct: 177 STIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANGY------EKYGNEEELIKDPIN 230

Query: 200 YYPGVYLK--------------------------HVGKELADKYSSEL------------ 221
           +   VY+K                              EL  +  +++            
Sbjct: 231 HLFDVYVKINKDVAEQEVPIKELKEQIKQKKENNEDTTELEKELQAKVDVSYDEKARRYF 290

Query: 222 --LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +   +E  L + + +   ++ K  ++    LNI  D +  E       P  +    + 
Sbjct: 291 KSMEDGDEGALVLWRRFRDLSIEKY-KETYARLNIDFDRYSGESQV---KPESLAKAYEA 346

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           +A+ G   E                  K +              +++ DG+  Y   D+A
Sbjct: 347 MAKTGVSEESEGAVIVDFAKHGAKKLGKAI--------------VVRKDGTPLYLTRDIA 392

Query: 340 YFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               +  E  FD M+YV+ +    ++ +L  V   V  K       L    +    GM  
Sbjct: 393 AIVERDEEFHFDKMLYVVAAQQDLHLAQLFKVTELVGRKD------LANRCQHVNFGMVR 446

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            MS R G    L  ++ +VG    +   + +KN+   +
Sbjct: 447 GMSTRKGTVKFLNDILKDVGE---KMHEVMKKNTAKYE 481


>gi|84998060|ref|XP_953751.1| arginyl-tRNA synthetase [Theileria annulata]
 gi|65304748|emb|CAI73073.1| arginyl-tRNA synthetase, putative [Theileria annulata]
          Length = 622

 Score =  188 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 99/572 (17%), Positives = 216/572 (37%), Gaps = 102/572 (17%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N+ L   Y+   L+ +  S       L  +   V +++ S N    +H+GH R   +G 
Sbjct: 72  LNIKLRDQYIIDQLNVMSESDRLNVGKLTDE--TVLVDYFSPNVGKNLHMGHIRSLGLGQ 129

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFW---RYQQALYNN--DSDLPEGYYPG 203
            +++L+ FSG +V R  ++ D G Q   +   +     R  +AL     +       +  
Sbjct: 130 AISNLLDFSGSKVIRRNHVGDFGLQSGIIMRYIIEYDTRAMEALNPATCNRSFMRELFRY 189

Query: 204 VYLKHVGKELADKYSSE--LLNFPEEKW---LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
             +     E + +Y+++   L+FP   +   +  + DY   A  K   D   A   + + 
Sbjct: 190 QQIGFSPLEYSYEYNTKNLTLSFPLFAYGLVVDTIDDYYKLAFEKFSSDQEFARRAKIET 249

Query: 259 FISEDDFHRGDPS----------PIRDIIDNLARQGY------VYEGILPPPKSKTT--Q 300
           ++ +++    +P              DI+D    +G       +Y+ +      +    +
Sbjct: 250 YLLQNEKSFANPQWENVNHISLVQYNDILDYYYIKGLKNIPESLYKNVTNRLIEELIKEK 309

Query: 301 KCDMDRKQLLF--------------RSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKY 345
           K D + K++++                 +     D+ +L++ +GS TY A DL     + 
Sbjct: 310 KVDQNDKEVVYTISKSSKQHNKPDNSDNVEVKKEDKTVLRTREGSLTYMATDLGALSHRI 369

Query: 346 ERG-FDNMIYVMGSDHSGYVK--------RLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                D +IYV  ++   + +        +L  +A  ++  K    +      ++  +G 
Sbjct: 370 GWNKPDRIIYVTENNQKSHFQKLYTIIYVQLYKIAKKLNILKT-CKMEHVGFGQIGLEGT 428

Query: 397 PIKMSKRAGDFITLRHVVDEV--------------------------GSDSVRFMMLWRK 430
             K+  R G+  T++ +  +V                          G  S+ F  L  +
Sbjct: 429 G-KIRSRTGNTCTIKDITKQVVELVTEKFVKRGDYLRLKHPIAARKIGVGSILFSDLSVE 487

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                +F   ++  Q   N +  + Y+Y R +SI  + +               IP    
Sbjct: 488 PKSGYNFSIERLMNQ-GYNLLIAILYSYVRSKSILERCE-----------SLPQIPSNEF 535

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  E +L + L  +  +I  +   +EP+++  YL +L+  F+  +           V  
Sbjct: 536 RNEYERKLGMLLLGFENMIAASISMREPHRVCKYLTNLSKGFNQFYEKT-------PVIV 588

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +++  ++   +LV   +  I  GL+I+ +++ 
Sbjct: 589 DDKVNSLSY-KLVKMTSKAIEIGLDILNIQTV 619


>gi|330861410|emb|CBX71639.1| hypothetical protein YEW_GQ28430 [Yersinia enterocolitica W22703]
          Length = 199

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 8/181 (4%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M + A  S ++   L                  + +      G    N  M +++ LG+ 
Sbjct: 1   MNIQALLSDKVSQALIAAGAPAG------SEPQVRQSAKAQFGDYQANGVMAVAKKLGMQ 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +AE ++  + +D     V IAG GFIN++L   ++   +   + +     + +  + 
Sbjct: 55  PRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKVEEALKAPKLGVQPV--EP 112

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +++ + N    MHVGH R  ++GD     + F G+ V R  ++ D G Q   L   
Sbjct: 113 QTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAY 172

Query: 181 V 181
           +
Sbjct: 173 L 173


>gi|302924209|ref|XP_003053837.1| hypothetical protein NECHADRAFT_31699 [Nectria haematococca mpVI
           77-13-4]
 gi|256734778|gb|EEU48124.1| hypothetical protein NECHADRAFT_31699 [Nectria haematococca mpVI
           77-13-4]
          Length = 635

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 91/518 (17%), Positives = 169/518 (32%), Gaps = 76/518 (14%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G+       G   K  +EF S N      V H R  +VG  +A++    G++V +  Y+ 
Sbjct: 146 GLADAAAPDGSKKKAIVEFSSPNMESEFLVSHLRSTLVGSYVANIHTSMGWDVVKMNYLG 205

Query: 169 DAGAQINTLALSVFWRYQQALYNN---------DSDLPEGYYPG-VYLKHVGKELAD--K 216
           D G QI  LA        +  +           +  + E + P    +K    E  D  +
Sbjct: 206 DWGKQIGLLAAGWQRFGSEEEFAKQPLRHLLEVNHKIKELFKPEHDQVKAAKGEGKDTNE 265

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIR----------DDLKALNIQHDIFISEDDFH 266
             S+ L+   + +   ++D    A+    R          D    L +  D +  E    
Sbjct: 266 IESQGLHAERDVFFKKMEDKDPDAIALWQRFRDATVKDYTDSYARLGVTFDEYSGESQVS 325

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 I ++   L  +G VYE      +   +   D  +      ST         +  
Sbjct: 326 ---AESIAEVEQALKEKG-VYE------EHDGSWMIDFTKHDAKGLSTA-------VVRF 368

Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINV 383
            +G+ +Y   DLA    +Y+   FD MIYV+  +   +  R+      +   +   +I  
Sbjct: 369 RNGTTSYLLRDLATVLDRYKAHKFDKMIYVVAMEQEMHFHRVTKCLELMGRQDLAERIQH 428

Query: 384 LLCELVRLYRDGMP-------------------IKMSKRAGDFITLRHV-VDEVGSDSVR 423
           +    +    D                      ++       F+      VD +G  S+ 
Sbjct: 429 VAIAKINGLPDRFKDAKLLSDYLDCCHTVMQTSVEEETEEPLFVDKTDKSVDLLGLSSLF 488

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
                 K +     D  K+     E+    +Q  YAR  S   +  +   ++D+      
Sbjct: 489 IQDFTHKRATPYAVDSKKMASLVSESGA-AIQNCYARLTS---KLSEAPAEVDYATLDYA 544

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            +  E   D +E  L+  +A+YP   + +    EP  +  YL  L             + 
Sbjct: 545 SLEAE---DYAE--LLRIMAQYPDTAQASFKTLEPSLIIIYLLRLVDQVM-----MTLDD 594

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
                  +  ++   R+ L      +  +   ++GV  
Sbjct: 595 DDEQDWTDKDEMNKARMALYENARQVFENAFRVLGVSP 632


>gi|312069872|ref|XP_003137884.1| hypothetical protein LOAG_02298 [Loa loa]
 gi|307766950|gb|EFO26184.1| hypothetical protein LOAG_02298 [Loa loa]
          Length = 500

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 92/543 (16%), Positives = 185/543 (34%), Gaps = 92/543 (16%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L+++ S +++ +  I           + L+     + I++ S N     HVG+ R  V+G
Sbjct: 2   LHVTDSSMKRFVYEIWRDENPAAMLLQKLVKNKKSIVIDYSSPNIAKQFHVGNFRSTVIG 61

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD--------LPEG 199
             + ++   +G +V    YI D G Q   +A   +W   +      S         L   
Sbjct: 62  RYIDTINRAAGNKVMSINYIGDWGLQFALIA--AYWPMMKPSQEEWSAWNTMQRLTLLAK 119

Query: 200 YYPGVYL--------KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            Y                  ++     + LL     + L      + Q   + +    + 
Sbjct: 120 CYVEANKSAERSNSFLQRAHDILASMENSLLTAGTSEHLSFW-QSARQLSHEQLHRFYRR 178

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +N+  D+   E DF          +ID + R+G               Q  +     +  
Sbjct: 179 INLSMDVEYFESDF----VVSAHQLIDRMLREG---------------QAENGGNGAISV 219

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV 370
           R   +  D    + + + +  Y + DLA    + +    D  +YV+      +   L+ +
Sbjct: 220 RCKEL--DKPIIIRRPNNTTLYLSRDLASALLREQLYAADEYLYVVDHAQRQHFNNLKYL 277

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------- 415
             A+          + + ++    G    +S R G+   +  ++D               
Sbjct: 278 LNAMGRND------IGDKIQHVSFGRVKGLSTRLGEVELVSKILDHGLELAKSFITKSKT 331

Query: 416 -EVGSDSV------------RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            ++G D +                L R  S    F F K   Q  +N    +Q  ++R  
Sbjct: 332 MKIGQDEISQVAANLSLGTMIIDDLKRARSTDYSFSFDKA-FQMNQNNALLLQTKHSRLM 390

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           SI  +   +  DL            + E + +  +L+     +P V+  +    EP +L 
Sbjct: 391 SIEERNHTLKQDL------MERFEGDFETNEASWRLLKQFKAFPDVLYASYQEMEPCRLT 444

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            YL  LA       +       +  + +   ++ + RL L+     I+NSG+ ++G+E  
Sbjct: 445 VYLLQLA-------NIVGFASCILRISSEPIEVAIPRLLLLSTARKILNSGMRLLGMEPL 497

Query: 583 NEM 585
            +M
Sbjct: 498 KKM 500


>gi|145349392|ref|XP_001419119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579350|gb|ABO97412.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 652

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 109/662 (16%), Positives = 224/662 (33%), Gaps = 145/662 (21%)

Query: 59  LDPLTIAELIVARIKID-------PDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGI 110
           ++P  +AE +      +         +     AG  ++NL ++ P      + ++   G 
Sbjct: 1   MNPKEVAEEVAREFGEEVAKRPRRGAIVGCEAAGV-YVNLKMNRPMVFEATMKAVARRGG 59

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++G     KG +V IE  S+NP  P+H+G+ R  ++G  L+ +M   G++V   +Y+ND 
Sbjct: 60  KFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLSRMMKACGHDVKEAFYVNDL 119

Query: 171 GAQ--------------INTLALSVFW-----------RYQQALYNNDSDLPEGYYPGVY 205
           GAQ              +        W           +  Q +     +L +    G  
Sbjct: 120 GAQIGLTALAYSRIYDKMTPFMKIDHWIGAMYAVMNTCQELQQVGVKPGELEDACKAGQE 179

Query: 206 LKH--VGKELADKYSSELLNFPEEKWLPIVKDYS------VQAMMKIIR----------- 246
                +   LA     E       ++  I +D        +  M++ IR           
Sbjct: 180 AVDALLKTSLAAVAGDEKKEKGVAEYFDIYQDLRGRFEKMMVVMLEDIRTIDDIKVEAGK 239

Query: 247 ----------------------------DDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                                       + L    +QHD F  E +   G       +++
Sbjct: 240 LNLAYEKQEPWAIKIFRKMVCDCLTGVQETLSTYGVQHDRFDFESEL--GWEGSNAKVLE 297

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRP---LLKSDGSY 331
            +    Y Y       +    Q   +D    +    F+    G   + P   +L+ DGS 
Sbjct: 298 IMQNSDY-YVPQTQSNEKGVPQGAYLDMAGFITDMGFKVGKGGYQKEYPPLYVLRPDGST 356

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVR 390
            Y   D+ Y   K     D ++ ++ S+     +++    A ++   + +   L  +LV+
Sbjct: 357 LYTYRDIVYSFKKASMS-DLILNIICSEQDLAQQKVSLAMAMMNPAMEGRQYHLSYDLVK 415

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVD-------------------------------EVGS 419
           L       KMS R G ++    + +                               EV +
Sbjct: 416 LTTG----KMSGRRGRYLLADDLYEDLKTVIREKMDKKYKEKGEVISAEMFDTVTHEVST 471

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478
            ++++ +L       ++FD  K+ +  ++    ++ Y   R  S+ R+  +       + 
Sbjct: 472 AAMKYALLSVSCMTQINFDIAKITDF-EDASAPFILYNSTRLTSVIRKFDERSAAGVLEK 530

Query: 479 LFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEP----------YKLAFYLYD 527
           L P + +      D  E  L++  +  +  +I +A +   P          +++  +L  
Sbjct: 531 LCPLDEVDFTKLDDDREWALLLDFVLPFASMITDAAMPTLPKPPALPSYGMHRVCDFLNM 590

Query: 528 LASVFHGHW--SHGRENPRLRFVQA--NNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                 G++  +  R  P    + A  N       R+        +I++GL ++ +E   
Sbjct: 591 FVRALSGYYGPAGVRMMPVQSQLDAGWNETPSMHARIHACKCFKQVIDNGLRLLMIEPLE 650

Query: 584 EM 585
            M
Sbjct: 651 RM 652


>gi|17532153|ref|NP_495227.1| aRginyl aa-tRNA syntheTase family member (rrt-2) [Caenorhabditis
           elegans]
 gi|15617714|gb|AAL02449.1|U23169_1 Arginyl aa-trna synthetase protein 2 [Caenorhabditis elegans]
          Length = 512

 Score =  185 bits (469), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 89/525 (16%), Positives = 182/525 (34%), Gaps = 96/525 (18%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            +GK  ++ ++F S N     HVG+ R  ++G  +  +    G EVT   Y+ D G Q  
Sbjct: 29  TVGKSQRIVVDFSSPNIAKQFHVGNLRSTLIGRYVDKVSRVMGNEVTSVNYLGDWGTQFA 88

Query: 176 TLALSVFW-------RYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
            +A   FW       +Y  +L + +    L + Y        + +E   K     +   +
Sbjct: 89  MIA--AFWPQMRPSDQYWNSLSDVEKIKQLTDCYVVANKNMKIDEEFRAKVYETFVAMEK 146

Query: 227 E--KWLPIVKDYSVQAMMKIIRDD--------LKALNIQHDIFISEDDFHRGDPSPIRDI 276
                    K+     + + I+D             +++ D ++ E    R      +++
Sbjct: 147 AVTGEQENWKNDEHMMLWQQIKDISKNHLSEFYNLFDVKFDKWLCESSQVRKAHQYAQEL 206

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-------PLLKSDG 329
           ID    +G+                 +    + +FR   +  +  +        L KSD 
Sbjct: 207 ID----KGFT----------------EDLDGKTIFRLRDIDTEKKQSDGVNYAVLRKSDM 246

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           S  Y   ++A    +      D  +YV+      + K L+ +   +          L   
Sbjct: 247 SSLYLTREIAAILDRDAMFQADRYLYVVDRAQRQHFKALKVILEKIGRSD------LASK 300

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM----------------------- 425
           +   + G    +S R G    +  ++++    +++FM                       
Sbjct: 301 IEHIQYGRVRGLSTRNGRTEAVGEIIEKGRELALQFMKSSKTFCMDPAVESDIANVLSLS 360

Query: 426 -----MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
                 L R  +   +F F        +N    +Q  ++R  SI  + + +FP ++    
Sbjct: 361 TVVFNELKRARNSEYEFSFQNA-FALNQNNALALQMKHSRLSSIEEKHQHLFPQIE---- 415

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
                  + + +    +LI  L +  + +E +    E  +L   L  +A+        G 
Sbjct: 416 -ACTKFNDFDTNDDVKRLIRLLNDLEKAVELSAEKLEACQLTVQLIHVAAA------AGS 468

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              +LR V+    ++ + RL L  AV +++  GL  +G+     M
Sbjct: 469 VQKQLR-VKDQPDEVAVPRLLLFSAVRNVLAEGLRFLGITPARSM 512


>gi|86742408|ref|YP_482808.1| arginine--tRNA ligase [Frankia sp. CcI3]
 gi|86569270|gb|ABD13079.1| Arginine--tRNA ligase [Frankia sp. CcI3]
          Length = 348

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 8/184 (4%)

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
            R      L  +VD VG+D+ R+ ++       LD D   +  Q+ +NPVFYVQYA+AR 
Sbjct: 173 DRGASEQALDDLVDAVGADAARYWLVRSSPDSALDLDLDLMARQTSDNPVFYVQYAHARI 232

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            S+ R A  +      +     ++ Q       E +L+  L E+PRVIE+A   + P++L
Sbjct: 233 SSLLRDAGSLGLTAATEPVDVALLTQ-----PREGELLRALGEFPRVIESAARLRGPHRL 287

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A YL +LA V++  +   R  P+     A     T  RL LV A   +  +GL ++GV +
Sbjct: 288 ARYLEELAGVYYRFYDSCRVLPQG---DAEPGPATGARLLLVAATRVVFANGLGLLGVSA 344

Query: 582 PNEM 585
           P  M
Sbjct: 345 PERM 348



 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 92/164 (56%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  +   +        ++  +   + +ERP+   HG  ++  A+ L+R     P  +
Sbjct: 4   ADLADAIVTAIGRAVADGDLDVTVPTAVTVERPKTPEHGDYASPVALQLARAARRPPRAV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE +  R+  D ++ +V +AG GF+N  L+ + L +I  ++V +G  YGR +  +G +VN
Sbjct: 64  AETLARRLATDSELAAVDVAGPGFLNFRLADAALGEIARTVVSAGDRYGRAVRPRGVRVN 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           +EFVSANPTGP+ +   R A VGD L  ++  +G+EV  EY++ 
Sbjct: 124 LEFVSANPTGPVTLASARRAAVGDALGRILPAAGFEVGTEYHVG 167


>gi|289806421|ref|ZP_06537050.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 229

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 93/252 (36%), Gaps = 25/252 (9%)

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                 Y              ++G D   +  R             ++  LL E +   R
Sbjct: 3   IVRKAGYVPDSVPLEHHMFGMMLGKDGKPFKTRTGGT--------VKLADLLDEALERAR 54

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
             +  K      D   L  + + VG  +V++  L +  +    FD+  +    + N   Y
Sbjct: 55  RLVAEKNPDMPAD--ELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPY 111

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +QYAY R  S+FR+A     D+D        +      +  E QL   L ++   +    
Sbjct: 112 MQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEETLTVVA 163

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P+ +  YLYD+A +F G + H         + A N  +   RL+L    A  +  G
Sbjct: 164 REGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAKTLKLG 217

Query: 574 LNIIGVESPNEM 585
           L+ +G+E+   M
Sbjct: 218 LDTLGIETVERM 229


>gi|303278782|ref|XP_003058684.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459844|gb|EEH57139.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 580

 Score =  183 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 106/585 (18%), Positives = 212/585 (36%), Gaps = 106/585 (18%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + ++  SG  YG      G +  IE  S+NP  P+H+G+ R  ++G  LA L A  GY+V
Sbjct: 1   MDAVAASGETYGHTNAAGGKRCIIEHTSSNPNAPLHIGNLRNVIIGAHLAKLQAACGYDV 60

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY---------------- 205
            + +Y+ND GAQI   AL+    Y +       D   G    V                 
Sbjct: 61  KQAFYVNDLGAQIGLTALAYSRVYDKIKPYMKIDHWIGAMYAVMNTCQELQTVGASLASA 120

Query: 206 ------------LKHVGKELADKYSSELLNFPEEKW---------------LPIVKDYSV 238
                          + ++L +++   ++   E+                     +++++
Sbjct: 121 GGDEKKTKGIAEYFDIYQDLRERFEKMMVVMLEDVRKIENIKVEAGKLNLAYERQEEWAI 180

Query: 239 QAMMKIIRD-------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +   K++ D        L    +QHD F  E +   G       ++  +    Y      
Sbjct: 181 KIFRKMVCDCLTGVQTTLSTYGVQHDQFDYESEL--GWEGSNDKVLAIMRNSDYFVPQTQ 238

Query: 292 PPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344
              K    Q   +D    +     ++   G   + P   +L+ DGS  Y   D+ Y   K
Sbjct: 239 KNDKG-VPQGAYLDMSSFIADQGLKTGKGGYQKEYPPLYVLRPDGSTLYTYRDIVYSFKK 297

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGM------- 396
             R  D ++ ++ S+     +++      ++ + K +   L  +LV+L    M       
Sbjct: 298 ASRS-DLILNIICSEQELAQQKVSLGMMMMNPEMKGRQYHLSYDLVKLTTGKMSGRRGRY 356

Query: 397 --------------PIKMSKR---AGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLD 436
                           KM K+    G+ ++      V  EV + ++++ +L       ++
Sbjct: 357 LLADDLYDELKTVITEKMRKKYEDKGEVMSAEEFDAVTHEVSTAAMKYALLSVSCLTQIN 416

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSE 495
           FD  K+ +  ++    ++ Y   R  S+ R+ +    +    +L P   +      D  E
Sbjct: 417 FDIAKITDF-EDASAPFILYNSTRVASVVRKFEAKVSEGKLPELPPLAEVDASKLDDDKE 475

Query: 496 LQLIVH-LAEYPRVIENA--TIAQEP--------YKLAFYLYDLASVFHGHW--SHGREN 542
             +++  +  +  +I  A      EP        +K+  +L  +     G++     R  
Sbjct: 476 WLILMEYVLPFASMIREAGHAKLPEPPQLPQYGCHKVCDFLNTMVRQLSGYYGPQGVRIL 535

Query: 543 PRLRFVQA--NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           P    ++   +    T  R+ L  A   +I++GL ++ +E    M
Sbjct: 536 PTDSQLETGWDGVAATHARVHLCKAFKQVIDNGLRLLMIEPLERM 580


>gi|240275942|gb|EER39455.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 443

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 143/406 (35%), Gaps = 78/406 (19%)

Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           L  + ++      +   + L + K +   ++ + I      LNI  D +  E       P
Sbjct: 12  LYAERNAFFKRMEDRDPEALSLWKRFRDISIERYIS-TYARLNITFDEYSGESTVR---P 67

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG- 329
             I  + + L  +G VYE      +++ +   + ++       T         ++++ G 
Sbjct: 68  ETIEKVENMLKDRG-VYE------ENEGSWVINFEKHGARKLGT--------AVVRNRGR 112

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           + TY   D+A    + E+  FD MIYV+ ++   Y +R+      + +      ++    
Sbjct: 113 TTTYLLRDVAAVLERVEKYEFDKMIYVVSAEQDSYFQRVFKTVEIMGDPNIAAKLVHINF 172

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGSD 420
                 G    MS R G    L  ++DE                            VG  
Sbjct: 173 ------GKAQGMSSRLGTVKLLSDILDECGSAMHEVMRSNEAKYAQVADPEAVADVVGIT 226

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA---KDIFPDLDF 477
           ++    +  K      FD  ++    + +   Y+QY++AR  SI R+A    D     DF
Sbjct: 227 AIMAQDMSGKRVNNYPFDITRMTSF-EGDTGPYLQYSHARLCSIMRKANLAADQVAKADF 285

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
            L            +   + ++  +A+YP +   A    EP  +  YL+ L       + 
Sbjct: 286 SLLK----------EPHAIDILRLMAQYPDMTTQAFKTLEPTTILTYLFRLTHQVSSAYD 335

Query: 538 HGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                  ++ +  +   ++ + R  L      ++ + + ++G    
Sbjct: 336 ------VIKVLGTDEGPEVMLARSALHEGARQVLENAMRLLGFTPV 375


>gi|315497731|ref|YP_004086535.1| arginine--tRNA ligase [Asticcacaulis excentricus CB 48]
 gi|315415743|gb|ADU12384.1| Arginine--tRNA ligase [Asticcacaulis excentricus CB 48]
          Length = 679

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 105/600 (17%), Positives = 201/600 (33%), Gaps = 102/600 (17%)

Query: 67  LIVARIKIDPDVD---SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
            IV  +      D    +   G  +INL LS  ++     ++   G  +G +    G   
Sbjct: 97  WIVDILNGSCFADAIAKLETKGM-YINLTLSDGWMLNGAQAVTEIGARFGDSDALMGRSA 155

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL------ 177
            +++ S N    +H GH R  +VG  L++L   SG +  R  +IND G     L      
Sbjct: 156 VVDYSSPNVAKTLHAGHIRSTIVGHVLSNLWERSGADTFRVNHINDFGGFGFMLEGYRRF 215

Query: 178 -------------------ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK--ELADK 216
                                    R  ++   +D    E         H     EL   
Sbjct: 216 GTLFPADFVDNDKLLEIYKIRRSVERILESGKASDEWDAEDAAIAARYFHSATSLELLKS 275

Query: 217 YSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLK-------ALNIQHDIFISEDDFHR 267
             +E +   +   + L       V   + +++  L+       ALNI  D+ + E  +++
Sbjct: 276 SFAEYVAASDARFRALEQGDAEEVALWIDMVKWSLQSFEGFYDALNIHFDLVLGESFYYQ 335

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTT-----QKCDMDRKQLLFR-------STM 315
              + ++  + +     +           +       +  +++R  L+         + +
Sbjct: 336 AGDAVVQAALASGKAVVFTVADAEAAIAIEEARFASGEIGEIERDTLIRSIRKDIGAAVV 395

Query: 316 VGDDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAA 372
           + D  +R  + ++DG   Y   D+   + + +  FD  ++ YV+G +   +  RL   A 
Sbjct: 396 LLDSNERFVVRRADGQSIYSTRDMGAIQLRSQM-FDPTDVFYVVGQEQQVHFNRLFRSAY 454

Query: 373 AVSE-KKAQINVLLCELVRLYRDGMPIKMSKR-------------------------AGD 406
           A      A+                  K+S R                           D
Sbjct: 455 ATGIADAAKTAFQHVYFGFYVDAKTGKKLSSRQSVSNVIGLLSAAQVYFRNRLSDRVDSD 514

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ---SKENPVFYVQYAYARCRS 463
              L     E+   S+ F  L +     ++ D   +       + +   YV YA  R RS
Sbjct: 515 EAELSRAAQELAIGSIVFNDLKQDLKGAVEIDASDMDATIAGFERSGGAYVVYAACRARS 574

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           I R+      ++D             E D  E  L++ + + P+ +  A  A  P  L  
Sbjct: 575 ILRKNDGGTANIDG---------VSYEIDAQEADLLLKVQQIPQKVVAAAKAANPSVLVR 625

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +L D+A++++ ++         R    ++      RL +  AV   +   L+I  +E P 
Sbjct: 626 HLMDVAAIYNSYY--------TRVPVISDGVANPARLMITQAVQVALTRALSICHIECPE 677


>gi|145641732|ref|ZP_01797308.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273546|gb|EDK13416.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 158

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 15/173 (8%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++ VG  +V++  L +  +    FD+  +    + N   Y+QYAY R RSIF +     
Sbjct: 1   MIEAVGIGAVKYADLSKNRTTDYVFDWDNMLSF-EGNTAPYMQYAYTRIRSIFNK----- 54

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              D +       P  +  D  E  L + L ++   ++       P+ L  YLY+LA +F
Sbjct: 55  --TDINSTALLAAPL-TIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIF 111

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              + H         + A +  + + RL+L       +  GL ++G+++  +M
Sbjct: 112 SSFYEHC------PILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 158


>gi|153865014|ref|ZP_01997700.1| Arginyl-tRNA synthetase [Beggiatoa sp. SS]
 gi|152145491|gb|EDN72300.1| Arginyl-tRNA synthetase [Beggiatoa sp. SS]
          Length = 222

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 2/174 (1%)

Query: 51  MILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109
           MIL++ L + P  +A  I+  + ID + +  V IAG GFIN++L+    R ++  I+ + 
Sbjct: 1   MILAKALKMRPRDLAARIIEHLSIDDELIAKVEIAGPGFINVFLTLKAYRAVIDDILTAQ 60

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
             YGR+ +G G  V IEFVSANPTGP+HVGH R A  G  LA L+  +G++V +EYY+ND
Sbjct: 61  TAYGRSQMGAGQSVMIEFVSANPTGPLHVGHGRGAAYGAALAHLLTTAGFKVHQEYYVND 120

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           AG Q++ LALSV+ RY + L       P   Y G Y+  +   L  +    L +
Sbjct: 121 AGRQMDILALSVWLRYLE-LCGESVIFPANAYQGDYVWDIAASLHREQGDALRH 173


>gi|115644319|ref|XP_792125.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 408

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 134/375 (35%), Gaps = 46/375 (12%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----EYGRNLIGKG 120
           A  I  +I     V ++ +  KG +   L P ++ K +   V              I   
Sbjct: 60  ALQIAKKITCPEHVQNISVE-KGVLYFSLDPQFIVKQVLQDVSEQQGCYGYQQYPGIESK 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+ S N   P H GH R  ++G+ LA+L    G+ VTR  Y+ D G Q   L + 
Sbjct: 119 LNIIVEYSSPNIAKPFHAGHLRSTLIGNFLANLQESLGHNVTRINYLGDWGTQFGILGVG 178

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------- 232
                    + ++  L       +Y  +V    A +    +    ++ +  +        
Sbjct: 179 FQQ------FGSEERLKVNPIQHLYEVYVATNQAAENDPTIWQRAKDLFRRMEQGDSGAL 232

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            ++D   +  +   +   + L +  D + SE  +     S   +++ +L  +  +     
Sbjct: 233 ELRDRFKELSIPDYKKTYQRLGVHFDEYCSESQY----SSEAHNLLVSLREENLL----- 283

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFD 350
                + T   ++      F            L KSD S  Y   DLA    + +   FD
Sbjct: 284 -TTSERGTSDINLSDICPRFPVAT--------LAKSDSSSLYLTRDLAAVLDRRKHYTFD 334

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            M YV+     G+ ++L+ V   +       N    + +   + G  + M  R G  + L
Sbjct: 335 RMYYVVDKGQEGHFEQLKGVLKKM-------NREYFQGIHHVKFGKVLGMQSRKGTAVFL 387

Query: 411 RHVVDEVGSDSVRFM 425
             ++DE     +  M
Sbjct: 388 TDILDEARDRMLHNM 402


>gi|110736575|dbj|BAF00253.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 272

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/271 (19%), Positives = 89/271 (32%), Gaps = 53/271 (19%)

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-----LLCELVRLYRDGMPIKM 400
           E   + +IYV       +       A                  +   + L  DG   + 
Sbjct: 18  EEKAEWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGK--RF 75

Query: 401 SKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKN 431
             RA D + L  ++DE                             VG  +V++  L    
Sbjct: 76  RTRATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNR 135

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
                F F ++    K N   Y+ YA+AR  SI R++       D D   +         
Sbjct: 136 LTNYTFSFDQMLN-DKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHA 189

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           D  E  L +HL  +   +E A     P  L  YLY+L+  F   +S+ +       V  +
Sbjct: 190 D--ERALGLHLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSNCQ-------VNGS 240

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
             +    RL L  A A ++    +++G+   
Sbjct: 241 PEE--TSRLLLCEATAIVMRKCFHLLGITPV 269


>gi|149173497|ref|ZP_01852127.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847679|gb|EDL62012.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 238

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 7/193 (3%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-RPLGL 59
           M + A+  SR +  L E          +++  +++  +D   G    N AM L+ R   L
Sbjct: 1   MNILAEIRSRFEPVLTEWTDD---PSSVIE--MLKASQDAKFGDYQANFAMPLAARIPDL 55

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +A  IV ++ +    + + +AG GFIN+ L   +L    +  +V+    G      
Sbjct: 56  KPRDLATQIVEKVDLSDFCEPLEVAGPGFINIKLKQEWLNTQ-TQNLVADERLGVVPAES 114

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV ++F + N   PMHVGH R  V+GD    ++ F G++V  + +I D G Q   +  
Sbjct: 115 PQKVVVDFSAPNVAKPMHVGHLRSTVIGDANYRVLKFLGHDVVGDNHIGDWGTQFGMIIF 174

Query: 180 SVFWRYQQALYNN 192
                  +A +  
Sbjct: 175 GYKHFLNEAAFEE 187


>gi|225389885|ref|ZP_03759609.1| hypothetical protein CLOSTASPAR_03634 [Clostridium asparagiforme
           DSM 15981]
 gi|225044078|gb|EEG54324.1| hypothetical protein CLOSTASPAR_03634 [Clostridium asparagiforme
           DSM 15981]
          Length = 350

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/329 (19%), Positives = 121/329 (36%), Gaps = 36/329 (10%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  ++  LK        ++     ++  RP  C       N +M  ++     P+ 
Sbjct: 1   MKKILDLMEGQLKAAFSACGYDETFAKVVLSNRPDLCE---YQCNGSMAAAKAYRKKPID 57

Query: 64  IAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           IA  +V ++     + S V     GFINL LS  +L       + +G + G     K   
Sbjct: 58  IANGVVEQLGDGQGMFSMVQAVMPGFINLKLSGQFLADY-MKGMAAGEKLGLEKPEKPET 116

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +++  AN   P+HVGH R AV+G+++  L  F G+ +  + ++ D G Q+  +   + 
Sbjct: 117 IIVDYGGANVAKPLHVGHLRAAVIGESIKRLGNFLGHHMIGDVHLGDWGLQMGLIIEELR 176

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R  + +Y ++S      Y G Y +     + +          + K     K+ + QA +
Sbjct: 177 DRKPELVYFDES------YTGEYPEEAPFTIGELEEIYPAASAKSKEDEAFKERAHQATL 230

Query: 243 KII---------------------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           K+                      + +   LN+  D++  E D        I  +I+ L 
Sbjct: 231 KLQNGYAPFRAIWNHIIRVSVTDLKKNYSNLNVTFDLWKGESDAEPY----IPKLINLLT 286

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +G  YE        +           LL
Sbjct: 287 EKGLAYESQGALVVGRGRGDGYQGDSALL 315


>gi|115965891|ref|XP_001186294.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 428

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 134/375 (35%), Gaps = 46/375 (12%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----EYGRNLIGKG 120
           A  I  +I     V ++ +  KG +   L P ++ K +   V              I   
Sbjct: 80  ALQIAKKITCPEHVQNISVE-KGVLYFSLDPQFIVKQVLQDVSEQQGCYGYQQYPGIESK 138

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             + +E+ S N   P H GH R  ++G+ LA+L    G+ VTR  Y+ D G Q   L + 
Sbjct: 139 LNIIVEYSSPNIAKPFHAGHLRSTLIGNFLANLQESLGHNVTRINYLGDWGTQFGILGVG 198

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------- 232
                    + ++  L       +Y  +V    A +    +    ++ +  +        
Sbjct: 199 FQQ------FGSEERLKVNPIQHLYEVYVATNQAAENDPTIWQRAKDLFRRMEQGDSGAL 252

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            ++D   +  +   +   + L +  D + SE  +     S   +++ +L  +  +     
Sbjct: 253 ELRDRFKELSIPDYKKTYQRLGVHFDEYCSESQY----SSEAHNLLVSLREENLL----- 303

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFD 350
                + T   ++      F            L KSD S  Y   DLA    + +   FD
Sbjct: 304 -TTSERGTSDINLSDICPRFPVAT--------LAKSDSSSLYLTRDLAAVLDRRKHYTFD 354

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            M YV+     G+ ++L+ V   +       N    + +   + G  + M  R G  + L
Sbjct: 355 RMYYVVDKGQEGHFEQLKGVLKKM-------NREYFQGIHHVKFGKVLGMQSRKGTAVFL 407

Query: 411 RHVVDEVGSDSVRFM 425
             ++DE     +  M
Sbjct: 408 TDILDEARDRMLHNM 422


>gi|268531472|ref|XP_002630862.1| C. briggsae CBR-RRT-2 protein [Caenorhabditis briggsae]
 gi|187037298|emb|CAP23964.1| CBR-RARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 509

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 85/515 (16%), Positives = 170/515 (33%), Gaps = 84/515 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              ++ ++F S N     H+G+ R  ++G  +  +    G +VT   Y+ D G Q   +A
Sbjct: 31  PSKRIVVDFSSPNIAKQFHIGNLRSTLIGRYVDQVNRVMGNQVTSVNYLGDWGTQFAMIA 90

Query: 179 L-------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
                   S  +    +       L + Y        + +E   K     ++  +     
Sbjct: 91  AFWPQMKPSDQYWNSLSEVEKIKQLTDCYVVANKNMKLDEEFRAKVYETFVSMEKAVTEG 150

Query: 232 IVKDYSVQAMMKIIRDD--------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             ++     +   IR              +++ D ++ E    R      +++ID    +
Sbjct: 151 NYENDENMKLWSQIRQISKEHLTGFYNTFDVKFDEWLCESSQVRKAHQYAQELID----K 206

Query: 284 GYVYE---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           G+  +     +   K   T+K  +D                  L KSD S  Y   ++A 
Sbjct: 207 GFTEDLDGRTIIRLKDGETEKKKLDGVNYA------------ILRKSDMSSLYLTREIAA 254

Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
              +      D  +YV+      +   L+ V   +          L E +   + G    
Sbjct: 255 ILHRDATFQADRYLYVVDRAQRPHFNALKVVLEKLGRSD------LAEKIEHVQYGRVRG 308

Query: 400 MSKRAGDFIT----------------------------LRHVVDEVGSDSVRFMMLWRKN 431
           +S R G                                   + D +   ++ F  L R  
Sbjct: 309 LSTRNGRTEAVGEIVERGRELALQFMKSSKTFCMDPSVEEDIADVLSISTIVFNELKRAR 368

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESE 490
           +   +F F        +N    +Q  ++R  SI  + + + P +D    FP +      +
Sbjct: 369 NSEYEFSFQNA-FALNQNNALALQMKHSRLSSIEDKNQHLLPLVDSCTKFPVD------D 421

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +    +L+  L +    +E +    E  +L   L  +A+        G    +LR V+ 
Sbjct: 422 TNDDVKRLMRLLKDLEESVELSAQKLEACQLTVQLIHVAAA------AGSVQKQLR-VKD 474

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
              ++ + RL L  AV +++  GL ++G+     M
Sbjct: 475 QRDEIAVPRLLLFSAVRNVLAEGLKLLGMTPARSM 509


>gi|332023805|gb|EGI64029.1| Putative arginyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 386

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/424 (16%), Positives = 145/424 (34%), Gaps = 88/424 (20%)

Query: 200 YYPGVYLKHVGKELADKYSSELLNFP--------EEKWLPIVKDYSVQAMMKIIRDDLKA 251
           Y     L  +   ++D+      +            +   I K ++V+ +    +     
Sbjct: 13  YVSANKLAEIDSSVSDRARKIFNDLESGIESRGVAHEQWSIFKQHTVEEL----KRVYSR 68

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           + I  D +  E  ++  +   I  +++ +                      D   ++++ 
Sbjct: 69  IGITFDEYHWESMYNAKNIEKIVTLMEKMQ-----------------LLIRDEQNRKVVN 111

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAV 370
            S         P++KSDGS  Y A D+A    ++E+  FD M YV+ +    +   L  +
Sbjct: 112 LSNK----KSVPIIKSDGSTLYIARDIAAAIDRFEKNDFDCMYYVVDNTQVSHFSNLLEI 167

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------- 415
              +            E ++  + G    M  R G+ I L  ++D               
Sbjct: 168 LKQMQMPWT-------ERLKHIKFGRLHGMRTRKGNVIFLEDILDTARDIIKQKQIDSHT 220

Query: 416 -------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
                         +G  ++    L RK      FD+       K +    +QY + R  
Sbjct: 221 TKVRLDSSDNSSDILGISAMIVNDLKRKRERDYTFDWN-AAFDLKGDTGVKLQYTHCRLG 279

Query: 463 SIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           S+ R    I     +  L    V+           +L++ + ++  V+  +    EP  L
Sbjct: 280 SLERNCGAILTSTCEPSLLQEEVVD----------ELVILITKFEEVVLKSYEELEPCIL 329

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YL++L++  +  ++  R       V+     +   RL L H   +++  G+ ++G+  
Sbjct: 330 TVYLFNLSNAINKAFNSLR-------VKDELPDVASQRLLLFHVARNVLAQGMKLLGLIP 382

Query: 582 PNEM 585
             EM
Sbjct: 383 LEEM 386


>gi|269986149|gb|EEZ92462.1| Arginine--tRNA ligase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 589

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 113/614 (18%), Positives = 229/614 (37%), Gaps = 115/614 (18%)

Query: 40  CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99
                +S  + +  ++  G DP  IAE I   I          +A  G++N+ L+   L 
Sbjct: 21  SQFSDISF-SCIKYAKINGKDPSVIAEGIAKGI--TSKYVKKVVALNGYVNINLNFEELE 77

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +I+          +  G  + +E  S NP   +H+GH R + +G+ L   + +S  
Sbjct: 78  KQ-EAILSKIELKNTKNLFSGKIIRLEHTSVNPNKALHIGHMRNSYIGEFLRKSLVYSSA 136

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL-PEGYYPGVYLKHVGKELADKYS 218
            V    +I D GAQ+  + +   +  ++   N   DL     Y  V   +   E   +  
Sbjct: 137 NVITSNFIEDTGAQVADIIVGFKYMNKKIETNEKFDLYCSKIYKEVNESYENDESLLEKR 196

Query: 219 SELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            E+L   E      ++  DY V  ++      L   NI++++   E   +      ++  
Sbjct: 197 KEVLLKIEHGDKETLEFLDYIVNKVLLAQLSTLIGENIKYNLLDLER--YILKEGIVKAA 254

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +D L                K  +  + ++ +    + + G++V   L +SDG+  Y A 
Sbjct: 255 LDKL-------------MSEKIAKISENEKNKGCIVTDVGGNEVT--LTRSDGTSLYIAK 299

Query: 337 DLAYFKCKYE--------------------------------RGFDNMIYVMGSDHSGYV 364
           D+AY   K+                                 +  D    +  S  +   
Sbjct: 300 DIAYAMIKHSILSEKIKYKKFSSNADGTDILLSSNDGEEIGLQKIDISFTLTDSAQNAEQ 359

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP----------IKMSKRAGDFITLRHVV 414
           + ++++    S K +  N    E V + +D             ++MS R G  +   ++V
Sbjct: 360 QAVKSIIERFSGKDSY-NHYSYEPVAISKDTASYLGITTDDKFMRMSGRKGITVEFDNLV 418

Query: 415 DEV-----------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            ++                        S+ +R+ +L    S+++ FD        K +  
Sbjct: 419 SKIKGRIVEEAVKNGRKIDENSVSTLASNVIRYYILRFSPSKMVIFDINDATSL-KGDSA 477

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            YV Y+Y+R  SI ++A       DF +           FD +E + I  +  +  +++N
Sbjct: 478 VYVNYSYSRALSILKKANKK----DFKVVS---------FDEAENKFIREIIFWDEILDN 524

Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           A    +P  +  YL+ ++  F+  +   R       +  + R+    RL +V A  +++ 
Sbjct: 525 AVSNLKPNLVCEYLHRISDAFNAFYEKNR-------IIGDERE--ESRLLIVTAFKNVVE 575

Query: 572 SGLNI-IGVESPNE 584
           + L++ +G+   ++
Sbjct: 576 T-LSMFLGINLVDK 588


>gi|307171176|gb|EFN63163.1| Probable arginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 391

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 72/437 (16%), Positives = 157/437 (35%), Gaps = 93/437 (21%)

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------------KWLPIVKDYSV 238
           ++ ++ +     +Y+ ++      +  S +L+   +             +     K Y++
Sbjct: 5   SEDEMKKSPIKALYIAYITANKLAETDSSILDRARKIFNDLETGIGVTCEQWKTFKQYTI 64

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +    +     + I  D +  E  ++  +   +  +++ +          L     + 
Sbjct: 65  EEL----KRTYGRIGITFDEYHWESMYNAKNMERLITLMEKMQ---------LLVTDEQN 111

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMG 357
            +  ++D  +++            PL+KSDGS  Y A D+A    ++ER  FD M YV+ 
Sbjct: 112 RKVVNLDNDKII------------PLIKSDGSTLYIARDIAAAIDRFERNNFDCMYYVVD 159

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--- 414
           +  + +   L  +   +            E ++  R G    MS R G+ I L  ++   
Sbjct: 160 NTQAEHFSNLLEILRRMKVPWV-------ERLKHIRFGRLHGMSTRKGNVIFLEDILNTT 212

Query: 415 -------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                                    D +G  ++    L ++      FD        K +
Sbjct: 213 RDIMKQKQLDSCTTKIQLDSTDNSSDILGISAMIINDLKKRRQRDYTFDLN-AAFDLKGD 271

Query: 450 PVFYVQYAYARCRSIFRQAKDIFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               +QY + R  ++ R    + P + +  L    V+           +LIV +A++  +
Sbjct: 272 TGVKLQYTHCRLINLKRNCGAVLPSECEPSLLREEVVD----------ELIVLIAKFEEI 321

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +  +    EP  L  YL+ L+ V +          +   V+  +  +   RL L H   +
Sbjct: 322 VLKSYEEMEPCILTGYLFHLSHVINK-------AFKTLKVKNESSDVASQRLLLFHVARN 374

Query: 569 IINSGLNIIGVESPNEM 585
           I+  G+ ++G+    EM
Sbjct: 375 ILAQGMKLLGLMPLEEM 391


>gi|289812032|ref|ZP_06542661.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 259

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 110/276 (39%), Gaps = 21/276 (7%)

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN++L P++L + +   + S              + +++ + N    MHVGH R  
Sbjct: 1   GPGFINIFLEPAFLAEQVQQALTSDRLGVSQPTR--QTIVVDYSAPNVAKEMHVGHLRST 58

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           ++GD     + F G+ V R  ++ D G Q   L   +  + Q+   +      EG+Y   
Sbjct: 59  IIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGDMALADLEGFYRD- 117

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
                    A K+  E   F E     +VK  S     + +   L  + +  +       
Sbjct: 118 ---------AKKHYDEDETFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQI----T 164

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVD 321
           + R + +  RD +   +    +  GI+   K+K     + +   ++F        GD + 
Sbjct: 165 YDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA-VESEGATVVFLDEFKNKEGDPMG 223

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356
             + K DG Y Y   D+A  K +YE    D ++Y +
Sbjct: 224 VIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYI 259


>gi|68070611|ref|XP_677217.1| arginyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56497245|emb|CAI04834.1| arginyl-tRNA synthetase, putative [Plasmodium berghei]
          Length = 472

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 81/446 (18%), Positives = 156/446 (34%), Gaps = 61/446 (13%)

Query: 39  DCAHGHLSTNAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93
           +   GH   N A+ + +  G      +   ++  I+  I  +   D +  + +GFI + +
Sbjct: 36  NMKFGHFQCNNAINIYKKYGKELNFENAHKVSLSIIENINEN-LFDDINASPQGFITVKI 94

Query: 94  SPSYLRKILSSIVVSG--------IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           S  Y+ K L  +  +          E       K   V I+F S N    MHVGH R  +
Sbjct: 95  SKDYIEKSLLKLYKNNKININVDMDEIHDGNNAKYENVLIDFSSPNIAKEMHVGHLRSTI 154

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----GY 200
           +GD++  +  F   +     ++ D G Q   +   V   Y     N   ++PE       
Sbjct: 155 LGDSICKIFEFLKVKTHTINHVGDWGTQFGMIINYVITNYP----NYKEEMPELKSLTLL 210

Query: 201 YPGV---YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           Y      Y      E+  K  +  L   +E    I        + +  + +   L    D
Sbjct: 211 YQEAKKCYDNDKDFEIKSKEYAIKLQEHDEDCRYIW-----TKICEASKKEFDNLYNILD 265

Query: 258 I---FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           I   +  E  +       I   ++ L  +  +                      L ++S 
Sbjct: 266 IKLEYYGESFYIP----KIPSTLEILKDKNLLTNI----------------GDALCYKSE 305

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAA 373
                V   L KS+G Y Y + D+A    + +    D++IYV  +    + + L  +   
Sbjct: 306 KY--TVPLFLQKSNGGYGYDSTDIAALYYRLKVLNVDSIIYVTDNGQLSHFETLFELCKQ 363

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
                  + ++      L  +    K   R+G  I L ++++E    + + +M   K   
Sbjct: 364 AEWVDDNVKLIHVGFG-LVLNTDNKKFKTRSGTNIKLINLINEGTERAKKDLMERIKLKS 422

Query: 434 LLD---FDFCKVKEQSKENPVFYVQY 456
             +   F+   + + S++  V  ++Y
Sbjct: 423 DEEKNYFEGIDIDKLSQDICVSAIKY 448


>gi|308502688|ref|XP_003113528.1| CRE-RARS-2 protein [Caenorhabditis remanei]
 gi|308263487|gb|EFP07440.1| CRE-RARS-2 protein [Caenorhabditis remanei]
          Length = 511

 Score =  178 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/516 (15%), Positives = 175/516 (33%), Gaps = 84/516 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              ++ +++ S N     H+G+ R  ++G  +  +    G +VT   Y+ D G Q   +A
Sbjct: 31  PSKRIVVDYSSPNIAKQFHIGNLRSTLIGRYVDKVNRVIGNQVTSVNYLGDWGTQFAMIA 90

Query: 179 ---------------LSVFWRYQQA-----LYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                          LS   + +Q      + N +  + E +   VY   V  E     +
Sbjct: 91  TFWPQMKPSDQYWNSLSDVEKIKQLTDCYVVANKNMKIDEEFRAKVYETFVAME--KSVT 148

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               N+  ++ + + +    Q   + + +     ++  D ++ E    R      ++++D
Sbjct: 149 DGSENYGNDENMKLWQQIR-QISRRHLTEFYNKFDVTFDEWLCESSHIRKAHQYAQELVD 207

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +G+  +              +  +   +  +          L KSD S  Y   ++
Sbjct: 208 ----KGFTEDLDGRTIIRLREGDVEKKKPDGVNYA---------ILRKSDMSSLYLTREI 254

Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A    +      D  +YV+      +   L+ +   +          L E +   + G  
Sbjct: 255 AAILERDATFQADRYLYVVDRAQRQHFNALKVILDKLGRAD------LAEKIEHVQYGRV 308

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFM----------------------------MLWR 429
             +S R G    +  +++     +++FM                             L R
Sbjct: 309 RGLSTRNGRTEAVGEIIERGRELALQFMKSSKTFCMDPDVEHDIADVLSLSTVVFNELKR 368

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             +   +F F        +N    +Q  ++R  SI  + + + P     L        + 
Sbjct: 369 ARNSEYEFSFQNA-FALNQNNALALQMKHSRLSSIEEKHQHLLP-----LVNACTKFPDF 422

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           + +    +L+  L +    +E +    E  +L   L  +A+        G    +LR V+
Sbjct: 423 DTNDDVKRLMRLLNDLEHSVELSAQKLEACQLTVQLIHVAAA------AGSVQKQLR-VK 475

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++ + RL L  AV +++  GL ++G+     M
Sbjct: 476 GQPDEIAVPRLMLFSAVRNVLADGLQLLGITPARSM 511


>gi|169601692|ref|XP_001794268.1| hypothetical protein SNOG_03718 [Phaeosphaeria nodorum SN15]
 gi|160705993|gb|EAT88923.2| hypothetical protein SNOG_03718 [Phaeosphaeria nodorum SN15]
          Length = 543

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 89/527 (16%), Positives = 173/527 (32%), Gaps = 117/527 (22%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 K+ +EF S N T      H R  ++G  ++ L   + + V R  Y+ D G  I 
Sbjct: 54  ETENERKLVVEFSSPNITSEFQGKHLRSTIIGAFISRLYELNAWNVIRINYLGDWGKPIA 113

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-------------KELADKYSSELL 222
            L +       Q  Y+ D   P G+   +Y +                 E+A +   E  
Sbjct: 114 LLYVGWKKFGSQGAYDVD---PVGHLLEIYHQIEAEFQPEQAASRKARDEVAKEGKDEGE 170

Query: 223 NFPE-------EKWLPIVK-----DYSVQAMMKIIRDD--------LKALNIQHDIFISE 262
              E        +     K     D  ++A  + +RD            L ++ D +  E
Sbjct: 171 AQAEIESKGIFAERNEAFKKLEAGDEELKAFWERVRDVMVADYTGFYGRLGVRFDEYSGE 230

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
              +       ++I +                               +   T +G     
Sbjct: 231 SQVNAETMGRDKNISEE-------------------------SSGAWMIDMTKLGAKAGH 265

Query: 323 PLLKSD-GSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
            +++   GS TY   DLA  F+   + GFD MIYV+ SD+S +  ++  +  A+ +    
Sbjct: 266 AIVRDRSGSSTYLLRDLAAVFERSRKYGFDKMIYVVASDNSVHFTQVFKILEALDKD--- 322

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416
               +   ++ ++     KM+   G      +++D+                        
Sbjct: 323 ----IAAKLKHFKFSEVSKMASTLGKGYKPENILDKCEEAIATPPEADSEKAALLGTSKQ 378

Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
               +   +     L  + S +  FD   +    K      +QY YA+  ++        
Sbjct: 379 TQKGLAVSASLVQELSSRTSTVHAFDTGSMA-AFKLGSGPDLQYWYAKISTML-----SG 432

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             +   L   ++   E   D  +  L+  LA+YP V++    + E   +  Y   LAS+ 
Sbjct: 433 QTVSAALSNEDI---EGLADEDQANLLRVLAQYPEVVKATFTSLEASGIVTY---LASI- 485

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
                   +       +    + T     L+ A   ++ +G+ ++G+
Sbjct: 486 ------TEQLSDCLDEEDGEIETTPGLAALLEATRIVLGNGMKLLGL 526


>gi|195137498|ref|XP_002012565.1| GI21379 [Drosophila mojavensis]
 gi|193918548|gb|EDW17415.1| GI21379 [Drosophila mojavensis]
          Length = 212

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 15/212 (7%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-- 58
           + +           +     +      I+  + +        G    N AM L++ +   
Sbjct: 7   LSIMGYLEKVFTKAISNAYPRFSNVPTIIAAVNV----SSKFGDYQCNNAMGLAKKMKEQ 62

Query: 59  ---LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
                P  IA+ I   +   P ++ V ++  GFIN+++S       L++++  GI+  + 
Sbjct: 63  GIIKTPRDIAQDIQKCVPESPIIEKVEVSSAGFINIFISKKLAVLSLTNMLRYGIQPPK- 121

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 +V ++F S N    MHVGH R  ++G+++  L+ F  ++V R  ++ D G Q  
Sbjct: 122 --VSKKRVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFLQHDVIRINHLGDWGTQFG 179

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
            L   +  R+    + N+S  P G     Y +
Sbjct: 180 MLIAHLEDRFPN--FQNESP-PIGDLQEFYKE 208


>gi|218752997|ref|ZP_03531793.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 184

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           AD +  LK     +  +  ++   L + + +ERPR   HG  ++N AM L++ +G +P  
Sbjct: 4   ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A  +   +     + S  +AG GFIN+ L  +   K+++S++ +G  YG +L+  G KV
Sbjct: 64  LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           N+EFVSANPTGP+H+G  R A VGD L  L+   G +V RE
Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVRE 164


>gi|76800033|ref|ZP_00781958.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Streptococcus agalactiae 18RS21]
 gi|76584650|gb|EAO61447.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)
           [Streptococcus agalactiae 18RS21]
          Length = 244

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 105/242 (43%), Gaps = 12/242 (4%)

Query: 53  LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIE 111
           +++ L   P  IA  I  +IK D   + V   G  ++N +L  + +  ++L  ++  G  
Sbjct: 1   MAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSA 58

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           Y    IG+G  V I+  S N   P  +GH R  V+GD+LA++    GY   +  ++ D G
Sbjct: 59  YATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWG 118

Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--- 227
            Q   L ++   W  ++A+  +  D     Y  +  +       D+ + E     E    
Sbjct: 119 KQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDP 178

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +   + + +  +++++  R     +N+  D +  E  ++      + ++++ L  +  + 
Sbjct: 179 EATELWQWFRDESLLEFNRL-YDQMNVTFDSYNGEAFYN----DKMDEVLELLESKNLLV 233

Query: 288 EG 289
           E 
Sbjct: 234 ES 235


>gi|195135776|ref|XP_002012308.1| GI14172 [Drosophila mojavensis]
 gi|193918172|gb|EDW17039.1| GI14172 [Drosophila mojavensis]
          Length = 271

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 37/278 (13%)

Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +A  + + E      +IYV+ S  S +   +   A         ++ +      +     
Sbjct: 1   MAAIRHRIEEDHATWIIYVVDSGQSTHFNAIFKAAERCGILNPNVHRVDHVQFGVVLGDD 60

Query: 397 PIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMML 427
             K   R+GD + L  ++DE                             V    +++  L
Sbjct: 61  GKKFKTRSGDTVKLSDLLDEGMKYSLKQLQQRGRDKILTPKELLEAQEAVAYGCIKYTDL 120

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                    F F K+ +  + N   Y+ Y Y+R  SI R +   F +++  L   N+   
Sbjct: 121 CHNRISDYIFSFDKMLD-DRGNTAVYLLYTYSRICSIARSSGKDFSNVEDILDKFNI--- 176

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
                  E +L   L +   V+     +   + L  + Y+++ VF   +       +   
Sbjct: 177 -ELIHEKEWKLAKTLLKLHDVLIKCANSLFLHFLCEFCYEVSVVFTEFYDSCYCIEKNEA 235

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            Q  N  +   R+ +  A A+++    +I+G++   +M
Sbjct: 236 GQIIN--VNHSRILICEATAAVLRKCFHILGLKPVTKM 271


>gi|119568972|gb|EAW48587.1| arginyl-tRNA synthetase-like, isoform CRA_d [Homo sapiens]
          Length = 359

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 144/364 (39%), Gaps = 36/364 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR---PLGLDPLT 63
           F   +   L  +   +  E  I     +   +         +   +L +       D   
Sbjct: 5   FRRAIACQLSRVL-NLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDIQV 63

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG- 120
            A+ +  +++ D  V  +   G+  +N  ++   L K  L  ++  G +YG ++ +  G 
Sbjct: 64  QAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGL 122

Query: 121 --TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ +EF S N     HVGH R  ++G+ +A+L    G++V R  Y+ D G Q   L 
Sbjct: 123 PQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLG 182

Query: 179 LSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234
                  Y++ L +N        Y  V  +    +   K + E    L   + + L + +
Sbjct: 183 TGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQ 242

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +   ++ + IR   K L +  D +  E  F+R      ++++  L  +G + + I    
Sbjct: 243 KFRDLSIEEYIRV-YKRLGVYFDEYSGES-FYREKS---QEVLKLLESKGLLLKTI---- 293

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352
             K T   D+            GD      +++SDG+  Y   DLA    + ++  FD M
Sbjct: 294 --KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTM 342

Query: 353 IYVM 356
           IYV+
Sbjct: 343 IYVI 346


>gi|198456442|ref|XP_002136329.1| GA24005 [Drosophila pseudoobscura pseudoobscura]
 gi|198142680|gb|EDY71404.1| GA24005 [Drosophila pseudoobscura pseudoobscura]
          Length = 282

 Score =  170 bits (430), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 40  CAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94
             +G    N AM L++ +        P  IA  +     + P ++ + + G GF+N+YLS
Sbjct: 112 AKYGDYQCNNAMGLAKKMKEMGVNRTPRDIANELQKCCPLSPIINKLEVGGAGFVNVYLS 171

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             Y  + L +I+  GI+  R L     +V ++F S N    MHVGH R  ++G+++  L+
Sbjct: 172 KDYAAQSLKNILRHGIKPPRVL---KRRVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLL 228

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
            F  ++V R  ++ D G Q   L   +  R+   L  +    P G     Y +
Sbjct: 229 EFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFLNKSP---PIGDLQSFYKE 278


>gi|71668488|ref|XP_821124.1| arginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70886493|gb|EAN99273.1| arginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 692

 Score =  168 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 32/300 (10%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR-------PL 57
           A+    LK+ ++    K          ++I   +         N AM L++       P+
Sbjct: 8   ANVELALKDIVRHAMEK-AFPTISTPEVLISLGKVTE---YQCNNAMGLAKLLSKATPPM 63

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            + P+ + E +   ++ +  ++      +GFIN+ +   +   ++S ++  GI+     I
Sbjct: 64  KMSPINVGEELRKNLEENDLIERFEPTPQGFINIAIKQEWAATMVSRLLKMGIQPP---I 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV ++F S N    MHVGH R  ++G+T+  L  F G+EV R  ++ D G     L
Sbjct: 121 IPPKKVLVDFSSPNIAKEMHVGHLRSTIIGETICRLFEFCGFEVHRINHVGDWGTAFGML 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--- 234
            L +  ++   L     ++P+      + +      A K   E   F EE  L +VK   
Sbjct: 181 ILYLKRQHPNFLT----EMPDITDLTKFYRE-----AKKCFDEDPKFKEEARLQVVKLQA 231

Query: 235 --DYSVQAMMKIIRDDLKALNIQHDIF---ISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             + S+QA   I     K  ++ +D     I E      +P  I  ++  L   G + E 
Sbjct: 232 LENESIQAWKIICDISRKEFSLIYDRLGTRIEERGESFYNP-IIPRVLSLLQEAGKLEES 290



 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 110/345 (31%), Gaps = 59/345 (17%)

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I  I+  L      Y+  L P   +  +   +     +    +   +    L KSDG +T
Sbjct: 373 IDKIVPKLEPY---YKNQLSPLFREVFEAAGITDGDTI---AVPRFNFPLILQKSDGGFT 426

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   D+     ++     D ++Y        + +    +A  +              +  
Sbjct: 427 YDTTDVTSMYHRFVMEKMDRVVYCTDVGQYEHFRMCAQLAKDMGWMGDATWDHAGFGLVT 486

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE--------------------------------VGS 419
             DG   K+  R+G+   L+ ++DE                                +G 
Sbjct: 487 GADGK--KIKTRSGETAKLKDLLDEAVERSIAILEEREGGERSQGHTKEEMETLSKIIGI 544

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++++  L +       F + K+ + S  N   ++ Y YAR  SI R+A       D  +
Sbjct: 545 GAIKYFDLKQSRVNDYAFSYDKMLDMS-GNTAVFLLYQYARLCSIKRKA---NVSEDEFM 600

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI         E +L +       V+        P+ L  + Y+L S F   + + 
Sbjct: 601 KAEVVINT-----PQEKRLALCAFRMESVLLKTVEDLFPHHLTDFAYELVSCFSDFFQNC 655

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +              +   RL LV      +    +I+ +E+   
Sbjct: 656 KVVG---------DPMQNSRLCLVELTRITLKKVFDILNIEATER 691


>gi|322819381|gb|EFZ26522.1| arginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 692

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 32/300 (10%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR-------PL 57
           A+    LK+ ++    K          ++I   +         N AM L++       P+
Sbjct: 8   ANVELALKDIVRHAMEK-AFPTISTPEVLISLGKVTE---YQCNNAMGLAKLLSKATPPM 63

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            + P+ + E +   ++ +  ++      +GFIN+ +   +   ++S ++  GI+     I
Sbjct: 64  KMSPINVGEELRKNLEENDLIERFEPTPQGFINIAIKQEWAATMVSRLLKMGIQPP---I 120

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV ++F S N    MHVGH R  ++G+T+  L  F G+EV R  ++ D G     L
Sbjct: 121 LPPKKVLVDFSSPNIAKEMHVGHLRSTIIGETICRLFEFCGFEVHRVNHVGDWGTAFGML 180

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--- 234
            L +  ++   L     ++P+      + +      A K   E   F EE  L +VK   
Sbjct: 181 ILYLKRQHPNFLT----EMPDITDLTKFYRE-----AKKCFDEDPKFKEEARLQVVKLQA 231

Query: 235 --DYSVQAMMKIIRDDLKALNIQHDIF---ISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             + S+QA   I     K  ++ +D     I E      +P  I  ++  L   G + E 
Sbjct: 232 LENESIQAWKIICDISRKEFSLIYDRLGTRIEERGESFYNP-IIPRVLSLLQEAGKLEES 290



 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 110/345 (31%), Gaps = 59/345 (17%)

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I  I+  L      Y+  L P   +  +   +     +    +   +    L KSDG +T
Sbjct: 373 IDKIVPKLEPY---YKNQLSPLFREVFEAAGITDGDTI---AVPRFNFPLILQKSDGGFT 426

Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           Y   D+     ++     D ++Y        + +    +A  +              +  
Sbjct: 427 YDTTDVTSMYHRFVMEKMDRVVYCTDVGQYEHFRMCAQLAKDMGWMGDATWDHAGFGLVT 486

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE--------------------------------VGS 419
             DG   K+  R+G+   L+ ++DE                                +G 
Sbjct: 487 GADGK--KIKTRSGETAKLKDLLDEAVERSLAILEEREGGERSQGHTKEEMETLSKIIGI 544

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++++  L +       F + K+ + S  N   ++ Y YAR  SI R+A       D  +
Sbjct: 545 AAIKYFDLKQSRVNDYAFSYDKMLDMS-GNTAVFLLYQYARLCSIKRKA---NVSEDEFM 600

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
               VI         E +L +       V+        P+ L  + Y+L S F   + + 
Sbjct: 601 KAEVVINT-----PQEKRLALCALRMESVLLKTVEDLFPHHLTDFAYELVSCFSDFFQNC 655

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           +              +   RL LV      +    +I+ +E+   
Sbjct: 656 KVVG---------DPMQNSRLCLVELTRITLKKVFDILNIEATER 691


>gi|195359293|ref|XP_002045339.1| GM21064 [Drosophila sechellia]
 gi|194129328|gb|EDW51371.1| GM21064 [Drosophila sechellia]
          Length = 499

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 83/421 (19%), Positives = 158/421 (37%), Gaps = 80/421 (19%)

Query: 205 YLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIR----DDL----KALNI 254
           Y  +V    A +   E+     +    L    D ++    +  R    +DL      L +
Sbjct: 119 YKSYVAANQAAEQRPEIAQQARDLFAALEGGTDRAMAKQWQQYRKYTIEDLSKVYNRLGV 178

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D +  E  + +     I+D++D L   G +       P+    +   +D +++     
Sbjct: 179 HFDSYEWESQYSQ---QQIQDVLDKLRSAGLL------QPEHDGREIVVVDGRRI----- 224

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373
                   P++KSDGS  Y A D+A    +  R  F  ++YV+ +  + +   L    AA
Sbjct: 225 --------PVIKSDGSTLYLARDIAALLERLSRFQFSRLLYVVDNGQADHFNALFKTTAA 276

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416
           + ++      L  E ++  + G    MS R G  I L+ V+DE                 
Sbjct: 277 LDDR------LSLEQLQHVKFGRIQGMSTRQGKAIFLKDVLDEARSIMREKRNLSATTRE 330

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       +G  +V   +L ++     +F + +   Q   +    +QY + R  S+
Sbjct: 331 NYNLDDEHVCDILGVSAVLINVLKQRRQRDHEFSWQQAL-QVNGDTGIKLQYTHCRLHSL 389

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                D F D+D D    +     +E   + L L+  LA + + +  +    E   L  Y
Sbjct: 390 L----DNFRDVDLDDIKPDWKHFATEPADA-LDLLYALARFDQSVWQSKEQLEACVLVNY 444

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           L+ L +         R   RL   Q ++ +  + RL L +A    +  G+ ++G+   ++
Sbjct: 445 LFGLCNA------TSRALKRLPVKQESSLERQLQRLLLFNAAKKTLRQGMELLGLRPLDQ 498

Query: 585 M 585
           M
Sbjct: 499 M 499


>gi|291533470|emb|CBL06583.1| Arginyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 166

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 1/161 (0%)

Query: 80  SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139
              IAG GFIN YL    +   L++++ +G EYG     +  ++ +E+VSANPTGP+HVG
Sbjct: 6   KTEIAGPGFINFYLKSDVIYDTLANLLKAGSEYGNLPKQETPRIQVEYVSANPTGPLHVG 65

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R A  G  L +LM  +GY V+ EYYINDAG QI+ LALSV  RY + L   + + PE 
Sbjct: 66  HGRGAAFGSALVNLMRAAGYNVSSEYYINDAGKQIDNLALSVNARYLELL-GKEVEFPEN 124

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            Y G  +    K +  K   + LN  +E+ L I K+ +++ 
Sbjct: 125 GYHGQDIIETAKRIIAKDGDKYLNMSDEERLSIFKELALKE 165


>gi|58699515|ref|ZP_00374239.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533969|gb|EAL58244.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 151

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 10/161 (6%)

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML RKN  +LDFDF KVKEQSK+NP+FYVQYA+AR  S+ R A    P  D  L      
Sbjct: 1   MLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLLRTGG- 59

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545
                    EL LI  LA++P V+E A    EP+++ FYL ++A  FH  W +G+ +  +
Sbjct: 60  ---------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGKSDLNM 110

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586
           RF+  +N  LT  R+ LV A+A +I SGL+I  +E   EMS
Sbjct: 111 RFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 151


>gi|329572536|gb|EGG54186.1| arginine--tRNA ligase domain protein [Enterococcus faecalis TX1467]
          Length = 196

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 92/200 (46%), Gaps = 11/200 (5%)

Query: 12  KNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           K  + +    +  E+  +D+I  ++E P+   HG ++   A  L++     P  IA  + 
Sbjct: 4   KEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELA 62

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +I    + + + + G  ++N +++   + + ++  +V     YG +  G    V I+  
Sbjct: 63  EKIDG-TNFEKIEVVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMS 120

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQ 187
           S N   P+ +GH R  V+G+++A ++   GY+  R  ++ D G Q   L ++   W  ++
Sbjct: 121 SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE 180

Query: 188 ALYNNDSDLPEGYYPGVYLK 207
           A+       P      +Y++
Sbjct: 181 AVRQQ----PINELLRLYVQ 196


>gi|41207537|gb|AAR99638.1| ArgS [Lactococcus lactis subsp. cremoris MG1363]
          Length = 204

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 9/211 (4%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           D    +   L      +   ++I    +IE+P+    G L+   A  L++ L   P  IA
Sbjct: 2   DEKQLVSQALSAAIDGVLGVEQIAA--IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124
             I  +I      + V   G  ++N +L  +    +++  ++  G  YG   IG+G  V 
Sbjct: 59  GEIAEKIDTKG-FEKVIAVGP-YVNFFLDKNATASEVIREVLAEGEHYGDANIGEGGNVP 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I+  + N   P  +GH R  V+GD++A +    GY+  +  ++ D G Q   L  +    
Sbjct: 117 IDMSAPNIAKPFSIGHLRSTVIGDSIAKIYEKLGYQPIKINHLGDWGKQFGLLITAYKKY 176

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             +A     +  P      +Y+K   +   D
Sbjct: 177 GDEA---TITANPIDELLKLYVKINAEAKED 204


>gi|303243692|ref|ZP_07330033.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
 gi|302485934|gb|EFL48857.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
          Length = 228

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 1/225 (0%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67
            + ++   K+I+      ++ ++ I +E P     G  STN A  L++ L   P+ IAE 
Sbjct: 4   KNIIEALYKKINELTGESEEKMETIRLEEPPSLNLGDYSTNIAFRLAKLLKKSPMVIAEE 63

Query: 68  IVARIKIDPDVDSVFI-AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
           I   +K +       I A  G+IN +L+ +   K     +++  +       K  K+ +E
Sbjct: 64  IANSLKSENIEGIKDIKAVNGYINFFLNYNSYSKKGVKKILNEKDNFGKGEEKNKKIILE 123

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             SANP GP+H+GH R A+VGD+L  ++ F+GY V  +YY+ND G Q   +   +     
Sbjct: 124 HTSANPNGPLHIGHSRNAIVGDSLKRVLEFAGYNVETQYYVNDMGRQEAIVVFGLSKFKL 183

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
                 D  + E Y     L +   EL       +  + E     
Sbjct: 184 DKNKKPDHAIGEVYVETNKLLNENPELEKNILDLMKKYEEASEKK 228


>gi|229059877|ref|ZP_04197252.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719422|gb|EEL71025.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 178

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           ++ ++    L  I      + +ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2   NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGDAAFP-CFSLAKQYKKSPAIIA 58

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVN 124
           + +  ++  DP    V   G  ++N++ +   +   +  I +    EYG+N  G    V 
Sbjct: 59  KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           I++ S N   P  +GH R  ++G++L  +    GYEV    YI D G Q   L  +  
Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYK 174


>gi|316969201|gb|EFV53336.1| putative arginyl-tRNA synthetase [Trichinella spiralis]
          Length = 716

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/484 (16%), Positives = 157/484 (32%), Gaps = 100/484 (20%)

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L +L+  +G++V    Y+ D G Q   +A  +     + +  + +      Y   Y+  
Sbjct: 95  FLVNLLKSAGHDVISVNYLGDWGTQFGMIASGL-----RKIGKSSTAFSLADYANAYVTA 149

Query: 209 VGKELAD----KYSSELLNF-----------PEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
               L+D    +++   +              E +   + +     A M  ++     LN
Sbjct: 150 NHDSLSDSEITEFARHFVTALESGVYFCTYHGESEETALWRSI-CSASMAELKQTYSTLN 208

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +  DI+  E  F +      +++I  L + G +                + +  + +   
Sbjct: 209 VHFDIWQRESQFFQN----AKELIHTLTKNGLI--------------TVNREGVRGIVSK 250

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                    PL KSD +  Y   DLA    ++ +   D + YV+ S    + + L+ V +
Sbjct: 251 GHF-----IPLCKSDNTTLYLTRDLAAAILRFQQYQPDCIYYVVDSGQHQHFENLKLVLS 305

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----------------- 415
           A             E ++  + G  +  S R G  +    ++                  
Sbjct: 306 AAGYPS------FAERIKHIKFGRILNTSTRQGKGVKADELLKQGQLKAKTVLENASTTK 359

Query: 416 -----------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                      ++   ++       +      F +  V    K    + +Q  YAR  S+
Sbjct: 360 VLPFEYESVCQQLVLSALIVNDFKLRRIIDYKFCWDSVLN-VKGATGYSLQATYARLSSL 418

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQEPYK 520
               ++       DL   +    +S  ++    L   LA  P  +  +        EPY 
Sbjct: 419 VDGGQN-------DLLDADCNDLQSLHESEAKCLAEILA--PEFLAQSLRRCLDEFEPYP 469

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           L  YL+ L             + RL    A    +   RL L       ++  L+I+G++
Sbjct: 470 LVHYLFRLCKS------ANVAHKRLHVANA-PADVARARLLLFKTAQLTLHHCLHILGIQ 522

Query: 581 SPNE 584
             N+
Sbjct: 523 PLNK 526


>gi|291333570|gb|ADD93264.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 252

 Score =  163 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 52/278 (18%)

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   D+AY   K+ R F+  + ++G DH      L      +   K   + L    V L 
Sbjct: 2   YTTRDIAYHLNKFTR-FNKALNILGEDHKLQSNLLNIALEELGSNKP--DNLFYSFVNLP 58

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEV-------------------------GSDSVRFMML 427
                 KMS RAG  + L  ++D++                         G  S+R+ +L
Sbjct: 59  GG----KMSTRAGRVVYLDDMMDQIVDASLERLREVDMSDNQKRLLSEKIGIGSLRYNVL 114

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             +  +   F         + +   +  Y++AR  SI R+ +   P+   D         
Sbjct: 115 KVQPEKGFTFSIDDALS-IQGDSAPFAMYSHARMSSILRRYEASIPNSKLD--------- 164

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547
            S+   SE++LI  +A++P+ +E+A      + +  Y++ L+S F+  +         + 
Sbjct: 165 -SDLVESEIELIRTMAKWPKTVESAVDKFAIHIIPNYVHQLSSKFNNFYRDC------KV 217

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   N  L   R+ LV +   I+   L+I+GVE+P+ M
Sbjct: 218 IGDTNEAL---RINLVSSSKRILFDALDILGVEAPDRM 252


>gi|225389884|ref|ZP_03759608.1| hypothetical protein CLOSTASPAR_03633 [Clostridium asparagiforme
           DSM 15981]
 gi|225044077|gb|EEG54323.1| hypothetical protein CLOSTASPAR_03633 [Clostridium asparagiforme
           DSM 15981]
          Length = 248

 Score =  163 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 99/260 (38%), Gaps = 41/260 (15%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQI-NVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           ++      +  ++  VA      +  +  + L       +DG P K   R G  + L  +
Sbjct: 1   MVDKRQDMHFVQVFRVAKKAGIVEQDVPMIFLGFGTMNGKDGKPFK--TREGGVMRLERL 58

Query: 414 VDEV----------------------------GSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           + ++                            G  ++++  L  + S+   FD  +    
Sbjct: 59  ISDIDEAVYQRIMESERRSMTEEEARAASTIIGLAALKYGDLSNQASKDYIFDVERFSSF 118

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+ Y   R +SI  + ++    +D     + ++P   E    E  L++ L  Y
Sbjct: 119 -EGNTGPYILYTIVRIKSILNKYREDGGQVDETAETKVILPPAGET---EKALMLLLTRY 174

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+EN+     P+K+  Y+++LA+ F+  +         + +   +       + L+  
Sbjct: 175 SEVLENSFAETAPHKICQYVFELANAFNSFYH------ETKILSEGDEARKDSYIGLITL 228

Query: 566 VASIINSGLNIIGVESPNEM 585
              ++ + ++++G E+P+ M
Sbjct: 229 ARRVLEACIDVLGFEAPDRM 248


>gi|194690392|gb|ACF79280.1| unknown [Zea mays]
          Length = 240

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 23/229 (10%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+GSD   +  R   V   V    +A+       L RL  +G  +  +        L   
Sbjct: 31  VLGSDGKRFRTRSTEVVRLVELLDEAKSRSKSELLQRLTENGKIVDWTDEE-----LEQT 85

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            + VG  +V++  L         F F ++    K N   Y+QYA+AR  SI R++     
Sbjct: 86  SEAVGYGAVKYADLKNNRLTNYTFSFEQMLS-DKGNTAVYLQYAHARICSIIRKS----- 139

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             + D+    +    S     E  L ++L  +  V+E A     P  +  YLY+L+ +F 
Sbjct: 140 --NKDVEDLKMTGAISLDHPDERVLGLYLIRFAEVVEEACTNLLPNVVCEYLYNLSEMFT 197

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
             +++ +       V  +  +    RL L  A A ++    N++G+   
Sbjct: 198 KFYTNCQ-------VVGSPEE--TSRLLLCQATAVVMRQCFNLLGITPV 237


>gi|332982126|ref|YP_004463567.1| arginine--tRNA ligase [Mahella australiensis 50-1 BON]
 gi|332699804|gb|AEE96745.1| Arginine--tRNA ligase [Mahella australiensis 50-1 BON]
          Length = 449

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 142/374 (37%), Gaps = 75/374 (20%)

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD---LKALNIQHDIFISEDDFHRGDPS 271
           +   + N  E     ++++  V +   M+ I D+   L+   +    +  E   +  D  
Sbjct: 143 WGDCVANILETAGYEVLRECYVNSHKSMREINDEIVNLRLYGVVLSSWFYEQQLYDSD-- 200

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +++ I+ L   GYV                  +   + F +   G      L+  +G +
Sbjct: 201 -LQETIEELDIMGYVRH----------------EGDDMWFTTDTHG-----ALILKEGRF 238

Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T  A  +AY++ K ++ G+D +I +     +   + +      +  +   +  L+     
Sbjct: 239 TNIAMRMAYYRRKIFKEGYDLIIEIGDRASADTFETVREAMICLGCELEHMEYLVSP--- 295

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                H+++ +G D++RF++   ++ E              ++ 
Sbjct: 296 ------------------DYSHLLENIGRDALRFLLSSSRDKED-------------DDS 324

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +F VQYAYAR  SI R            L P   I        +E  L+  L + P  + 
Sbjct: 325 LFEVQYAYARICSILRHMDPNR----LALMPPEEIDFSMLRHPAEQALMRCLPDLPHKVR 380

Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            A   ++P  L  YL D+A +FH  +   R       V+ NN  L   RL L+ A   ++
Sbjct: 381 LAAQCRQPAILTDYLVDVADLFHKFYDECR-------VRINNNDLMYARLGLLEAARVVL 433

Query: 571 NSGLNIIGVESPNE 584
            +GL I+ +++P  
Sbjct: 434 ANGLYILNIDAPER 447



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 27/332 (8%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           Y+     + L   L        +  +    + + + RD  +G   TN  + + R      
Sbjct: 7   YITEQIIAVLNRALTAARSDGSITCRNAYEVKVNKTRDIKYGDFYTNMPIEMVRLTARPS 66

Query: 62  LTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             IA  ++    I     D + IAG GFIN++L P +   +L+ I+    EYGR  IG  
Sbjct: 67  DYIARTLLEHADISGTYIDRMEIAGSGFINIFLKPKWFYDVLTLILKERDEYGRVDIGDN 126

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG--AQINTLA 178
            KV I F    P   M+       V GD +A+++  +GYEV RE Y+N      +IN   
Sbjct: 127 RKVLIGF----PDIDMY-----SIVWGDCVANILETAGYEVLRECYVNSHKSMREINDEI 177

Query: 179 LSVF--------WRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           +++         W Y+Q LY++D  +  E      Y++H G ++     +      +E  
Sbjct: 178 VNLRLYGVVLSSWFYEQQLYDSDLQETIEELDIMGYVRHEGDDMWFTTDTHGALILKEGR 237

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              +         KI ++    L I+     S D F       +R+ +  L  +    E 
Sbjct: 238 FTNIAMRMAYYRRKIFKEGY-DLIIEIGDRASADTFE-----TVREAMICLGCELEHMEY 291

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           ++ P  S   +    D  + L  S+   +D D
Sbjct: 292 LVSPDYSHLLENIGRDALRFLLSSSRDKEDDD 323


>gi|167957303|ref|ZP_02544377.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 371

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 144/386 (37%), Gaps = 61/386 (15%)

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
               +     + K  ++      I   L  +    D+   E + ++     I D I    
Sbjct: 23  WENGDANTWKLWK-LAIGYAHDGINQTLARIGSHWDLVWHEHEHYKDGRGMILDNISKGI 81

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +      IL   KS                        D  +LKSDG+  Y   D+A  
Sbjct: 82  FKRLENGAILSNLKSYNLP--------------------DTIVLKSDGTSLYITQDIALT 121

Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRD--GMP 397
           K K  R   D + +V+G + S  +K++ A+   +   K +    L   L+ +     G  
Sbjct: 122 KLKKNRFKADKLFWVIGPEQSLAMKQVFAICEQLGIGKLSDFTHLPYGLISIVDKQTGAK 181

Query: 398 IKMSKRAGDFITLRHVVDEV-------------------GSDSVRFMMLWRKNSELLDFD 438
            KMS R G+ + + +++DEV                     D+V+F +L    +     D
Sbjct: 182 KKMSSRDGNTLYIDNLLDEVRDSLLNSGRDYDEKTADLIAIDAVKFAVLKPSRNSDSVLD 241

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +     K +   Y+ Y  +R  S+  +        D  L       +E    + E ++
Sbjct: 242 IQESINL-KGDSGIYILYTLSRINSLLSKYTG-----DLTLPQ----SEELALSSEERKI 291

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           ++ +A +P+ I +A  +  P  L  Y+ D+A VF+  ++  +         + +   T  
Sbjct: 292 VMLMAYFPKRITDALESYAPNILIEYILDIAHVFNSIYAKEQF-------ISEDVANTRK 344

Query: 559 RLQLVHAVASIINSGLNIIGVESPNE 584
           +L L  ++A +I + L ++G++  + 
Sbjct: 345 KLYLSKSIAIVITNALKLLGIKPVDR 370


>gi|330883273|gb|EGH17422.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 224

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 82/242 (33%), Gaps = 46/242 (19%)

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVD 415
               + + +++  VA         + +       +   DG P K   R G  + L  ++D
Sbjct: 1   DQRQALHFQQVFEVARRAGFVHDGMQLEHMGFGTMNGADGRPFK--TRDGGTVKLIDLLD 58

Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           E                           VG  +V++  L +  +    F+F ++    + 
Sbjct: 59  EAEERAYTLVKEKNPEVAEAELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLSF-EG 117

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+ YAY R   +FR+         FD     ++         E +L   LA++   
Sbjct: 118 NTAPYLLYAYTRVAGVFRKLG-----TPFDASKGQIVLAA----PQEQELAARLAQFTET 168

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           + N      P+ L  YLYDLA +F   + +         + A N      RL+L      
Sbjct: 169 LNNVAEKGTPHVLCAYLYDLAGLFSSFYENC------PILGAENPDQQQSRLRLAALTGR 222

Query: 569 II 570
            +
Sbjct: 223 TL 224


>gi|329572537|gb|EGG54187.1| arginine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 292

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/307 (20%), Positives = 112/307 (36%), Gaps = 61/307 (19%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L ++ D +  E  +     + + +I+  L  +  + E        +  +  D+    L  
Sbjct: 2   LEVEFDSYNGEAFY----KNQMDEIVTLLEEKHLLTEN-------QGAEIVDLTEYNL-- 48

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370
                       + KSDG+  Y   DLA    +     F   +YV+G++ S + K+L+AV
Sbjct: 49  --------NPALIRKSDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQSNHFKQLKAV 100

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416
              +  + +  ++       + + G   K+S R G  + L  V++E              
Sbjct: 101 LKELGFEWSD-DMEHIPFGLITQGGK--KLSTRKGKIVLLEEVLNEAVTLAGNQINEKNP 157

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      VG  +V F  L        DF   +V     E    YVQY +AR  SI 
Sbjct: 158 DLANREEVAKQVGVGAVIFHDLKNDRLNNFDFVLDEVVRFEGE-TGPYVQYTHARAMSIL 216

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R+A           F  +   + +  D    +++  L ++P  +  A    EP  +A + 
Sbjct: 217 RKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHS 266

Query: 526 YDLASVF 532
             LA  F
Sbjct: 267 IHLAQAF 273


>gi|227872248|ref|ZP_03990609.1| possible arginine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841934|gb|EEJ52203.1| possible arginine--tRNA ligase [Oribacterium sinus F0268]
          Length = 310

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/331 (20%), Positives = 127/331 (38%), Gaps = 39/331 (11%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L+  ++    +   +K +    V  RP  C      +N A++ ++    +P+ +AE
Sbjct: 4   LKAILQEAMESAFVEAGYDKDLAKVSVSNRPDLC---DYQSNGALMGAKKYQENPIALAE 60

Query: 67  LIVARI-----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121
            +   +     K  P   SV     GF+N+ LSP +L   L  +     E       +G 
Sbjct: 61  KVKGFLEKKSYKDTPLFSSVEAVKPGFLNVKLSPQFLGAYLQGMQTE--EQNGLHEKEGR 118

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K+ +++  AN   P+HVGH R AV+G+ L  +    G  V  + ++ D G Q+  +   +
Sbjct: 119 KILLDYGGANVAKPLHVGHLRSAVIGEALKRMGKRLGNNVVGDVHLGDWGLQMGLIITEL 178

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------- 232
             R +       S+L E Y           E  +  + E  N  +E  L +         
Sbjct: 179 EDRGELEKPFTISELEEIYPFASKKAKEKDEAGNLLNEEYANRAKENTLKLQQGDPVFHK 238

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           V +  ++  +  ++ + +AL++  D++  E D        I  +I  L  +   Y     
Sbjct: 239 VWERIMEVSVADLKKNYEALDVHFDLWKGESDADPY----IPKLISLLEEKKLAYRS--- 291

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                        +  L+   T  GD  + P
Sbjct: 292 -------------QGALVVDITEEGDSKEYP 309


>gi|315645723|ref|ZP_07898847.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453]
 gi|315279201|gb|EFU42511.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453]
          Length = 285

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 21/267 (7%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD- 79
            IK+ + I   + +E+P    HG  +TN AM L++ L   PL IAELI   ++ D     
Sbjct: 22  GIKLPESIP--VRVEQPSSMEHGDYATNIAMQLAKLLRKAPLHIAELIKTELEQDVPFKQ 79

Query: 80  ---SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136
              +  +   GFINL++           +                K+ IE  S NP    
Sbjct: 80  LVFATEVVAPGFINLHIDWEAWANHPFEL----------PPATHEKIVIEHTSINPNKSA 129

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R + +GDTL  LM   GY+V    YI+D G Q+    + +        +    D 
Sbjct: 130 HIGHLRNSCIGDTLVRLMRKLGYKVEAHNYIDDLGNQLADTVVGMLHTPLSKEHARFGDY 189

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN-IQ 255
               Y      +  +    ++ +E+L+  EE    +     +    +I+++ L+ +  + 
Sbjct: 190 CWDVYSSTNKAYEREPALVQHRTEVLHALEEGHQNLSW-IGLLVAERIVKEHLEEIEAVW 248

Query: 256 HDIF---ISEDDFHRGDPSPIRDIIDN 279
           H I    + E    RG       I++ 
Sbjct: 249 HWIRPSGMGEQHCQRGILGFRLRIVEE 275


>gi|227872250|ref|ZP_03990610.1| possible arginine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841897|gb|EEJ52167.1| possible arginine--tRNA ligase [Oribacterium sinus F0268]
          Length = 280

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 99/289 (34%), Gaps = 44/289 (15%)

Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV-LLCELV 389
            Y  +DL     + E    D  +Y+  S  + +  +   VA        +  +  +    
Sbjct: 1   LYATSDLGTIMDREEHYPKDLYLYIADSRQALHYTQFFRVARRAELLPKETELSYIGFGT 60

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------VGSDS 421
              +DG P K   R G  + L  ++ E                            V   +
Sbjct: 61  MNGKDGKPFK--TREGGVLRLERLISETRDSVLKRMEESKDNGLSQEEKEETAGIVALAA 118

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           +++  L  + ++   FD  K     + N   Y+ Y   R  SI R+  +   +   D   
Sbjct: 119 LKYGDLSNQATKDYIFDLEKFT-AFEGNTGPYILYTIVRISSILRKYAESKGEAWKDSLS 177

Query: 482 -----RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                    P  S  D + + L   LA +   + +A     P+K+  Y+Y L++ F+  +
Sbjct: 178 WISENAKNYPIGSSGDENVMALAKILAAFQDEMRDAWRDCAPHKICTYIYSLSNQFNSFY 237

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +      ++ +   + +     + L+     ++   + ++G  +P  M
Sbjct: 238 HN------VKILTEEDEQKKKEYIGLLCLSWKVLMDCIQVLGFSAPERM 280


>gi|76155576|gb|AAX26868.2| SJCHGC06108 protein [Schistosoma japonicum]
          Length = 242

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 86/231 (37%), Gaps = 15/231 (6%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V+G D   +  R        S    ++  LL E +   ++ +  K   +           
Sbjct: 27  VLGEDKKKFKTR--------SGDTVRLVDLLNEGLERAKNRLLEKERNKELTEAEFERAQ 78

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             V    +++  L    +    F F ++ +  K N   Y+ YAY R RSI R A      
Sbjct: 79  KAVAYGCIKYADLSHSRTIDYVFSFDRMLD-DKGNTAVYLLYAYTRIRSIIRNAGYSDKS 137

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++  +    +    +     E  L   L   P ++         + L  YLYDL+ VF  
Sbjct: 138 INEIIDTLPL----NFDHPMEFTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCVFTN 193

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            +         R  +  + ++   R+ L  A A ++  G +I+G+E+  +M
Sbjct: 194 FYDTCYCIE--RNQETGDVQINKERILLCEATARVMKCGFDILGIETVEKM 242


>gi|260833402|ref|XP_002611646.1| hypothetical protein BRAFLDRAFT_117121 [Branchiostoma floridae]
 gi|229297017|gb|EEN67656.1| hypothetical protein BRAFLDRAFT_117121 [Branchiostoma floridae]
          Length = 485

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 7/137 (5%)

Query: 30  DRIVIERPRDCAHGHLSTNAAM---ILSRPLGLD--PLTIAELIVARIKIDPDVDSVFIA 84
             +++        G    N+AM    L +  G    P  IA+ IV+ +     V+ V IA
Sbjct: 99  PPVMVTLSTQEKFGDYQCNSAMSIGQLLKAQGKKAVPREIAQAIVSNLPESGIVEKVEIA 158

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G GFIN+++  S++  ILS+ +  G++     + +  +V I++ S N    MHVGH R  
Sbjct: 159 GPGFINIHVRKSFVSSILSTALREGVKPP--PVDRKLRVVIDYSSPNIAKEMHVGHLRST 216

Query: 145 VVGDTLASLMAFSGYEV 161
           ++GD+ A LM F G++V
Sbjct: 217 IIGDSFARLMKFVGHDV 233



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           ++     ++D     +     E   D   E +L   L  +P +I         + L  ++
Sbjct: 367 KSIARLANVDESSLKKAAQTTEVSLDHPKEWKLAKCLVRFPEIISKILEDLYMHTLCEFM 426

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           Y+L++ F   +       + R       K+ M RL L    ASI+ +  +I+G+   N M
Sbjct: 427 YELSTTFTEFYDVCYCVEKDR-KTGEVIKVNMGRLLLCEVTASILATCFSILGITPVNRM 485



 Score = 69.9 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 11/162 (6%)

Query: 244 IIRDDLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           II D    L   + HD+   +  +++ D   IRD+++        Y+  +     +  +K
Sbjct: 217 IIGDSFARLMKFVGHDVLGVQKVYNQLD---IRDLLERGES---FYQDRMVQVVKELEEK 270

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDH 360
             +  ++           V   ++KSDG YTY  +D+A  + + E    D +IYV+ S  
Sbjct: 271 GLLKEEEGRKVLFTDASSVPLTIVKSDGGYTYDTSDMAAIRQRLEEERGDWLIYVVDSGQ 330

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLC--ELVRLYRDGMPIKM 400
             + + + A A A     A+   +      V L  D    ++
Sbjct: 331 GLHFQCIFAAAKAAGWYDAKRKRVDHTPFGVVLGEDKSIARL 372


>gi|289643118|ref|ZP_06475248.1| Arginine--tRNA ligase [Frankia symbiont of Datisca glomerata]
 gi|289507082|gb|EFD28051.1| Arginine--tRNA ligase [Frankia symbiont of Datisca glomerata]
          Length = 344

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 13/184 (7%)

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKN----SELLD-FDFCKVKEQSKENPVFYVQYAYARC 461
              L  +V  VG+D+ R+ +         +  +D  D   +  Q+  NPVF VQYA+ R 
Sbjct: 169 LADLADLVSTVGTDAARYSLARLPPGSAGARDIDLIDLDVITRQANGNPVFRVQYAHTRI 228

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             + R A  +   +D +    +++    E D     L+  L + PR +  A     PY++
Sbjct: 229 CLLLRNAGQLGLGVDVEGADVSLLTHPREGD-----LLRALGDLPRAVAAAAELWAPYRV 283

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
           A YL +LA  +H           L         LT  RL L  A   ++  GL+++GV +
Sbjct: 284 ARYLEELADTYHRF---HGVCEVLPRGNDAAGALTGARLLLADATRIVLAGGLHLLGVSA 340

Query: 582 PNEM 585
           P  M
Sbjct: 341 PTRM 344



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 59/113 (52%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD +  L+  + ++    +++ +    + +ERPR   HG  +T  A+ L+RP    P  I
Sbjct: 4   ADLAETLRAIVCDLVADDELDVEAPTMVPVERPRIAGHGDYTTAIALRLARPARRPPREI 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           AE + AR+++D  V  V +A  GF+N+ L+     +I   IV +G  Y R+  
Sbjct: 64  AEAVAARLRLDQAVSGVDVAAGGFLNIRLASDARGEIARMIVRAGDGYVRDTA 116


>gi|326567640|gb|EGE17748.1| arginyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 127

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 16/140 (11%)

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++
Sbjct: 4   FEGNTAPYMQYAYTRIRSIFARAGLDMADIGGEIV---------IHEDKERALAVKLLQF 54

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+        P+ L  YL++LA +F   +           + +++ K    RL+L   
Sbjct: 55  EEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAAL 107

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL ++G+++  +M
Sbjct: 108 TAKTLKQGLQLLGIKTVEKM 127


>gi|326562856|gb|EGE13144.1| arginyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 127

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 16/140 (11%)

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            + N   Y+QYAY R RSIF +A     D+  ++            +  E  L V L ++
Sbjct: 4   FEGNTAPYMQYAYTRIRSIFVRAGLDMADIGGEIV---------IHEDKERALAVKLLQF 54

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             V+        P+ L  YL++LA +F   +           + +++ K    RL+L   
Sbjct: 55  EEVLLLVAKDGMPHLLCQYLFELAGIFSSFYEAC-------PILSSDDKTKTSRLRLAAL 107

Query: 566 VASIINSGLNIIGVESPNEM 585
            A  +  GL ++G+++  +M
Sbjct: 108 TAKTLKQGLQLLGIKTVEKM 127


>gi|294865909|ref|XP_002764516.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239864077|gb|EEQ97233.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 213

 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      +G  SVR+  L +  +    F+F K+ +  K N   ++ YAYAR  SI 
Sbjct: 49  TEEEFDRASKIIGVASVRYFDLRQNRTTNYIFNFDKMLD-PKGNTAVFLLYAYARICSIL 107

Query: 466 RQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R+A  D    LD+      +       +  E  L + +  +  V+++     + ++L  Y
Sbjct: 108 RKANFDYHSGLDYSSEEVVI------TEEKERSLALEILRFAEVMQSVLSDLQCHRLCEY 161

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           ++DL + F   ++  +       V  ++++    RL L  A   ++    +I+ +     
Sbjct: 162 MWDLTNRFTAFYTECK-------VVGSDQE--RSRLLLCEATRRVLAQCFDILDITPLER 212


>gi|295114635|emb|CBL35482.1| Arginyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 215

 Score =  143 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 92/229 (40%), Gaps = 41/229 (17%)

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------------------- 417
           + L       +DG P K   R G  + L H++DE+                         
Sbjct: 2   IFLGFGTMNSKDGGPFK--TRDGGVMRLEHLIDEIDEEVYRKIQEKQRVPEEEMRRTAEM 59

Query: 418 -GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
            G  ++++  L  + ++   FD  +     + N   ++QY   R +SI  +  ++     
Sbjct: 60  IGLAALKYGDLSNQATKDYVFDVDRFISF-EGNTGPHIQYMVVRIKSILEKYGELMGG-- 116

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                 ++ P       +E +L + L  +  V+E+A     P+++  Y+YDL+  F+  +
Sbjct: 117 ----TYSLSPIRPAASETEKKLQLELCRFGEVVESAFAETAPHRICQYMYDLSDAFNNFY 172

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                    + +   +R+     + L+     ++N+ ++++G+E+P  M
Sbjct: 173 ------LVNKIIGEEDREKQAGFISLISLTKDVLNACMDLLGMEAPEHM 215


>gi|330886170|gb|EGH20071.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 142

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               ++  L  +  +  + + +   I +E  RD  HG  ++N AM+L++P G+ P  +AE
Sbjct: 5   IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAE 64

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++A +  D  V  V IAG GF+N + + +          ++         G   +V ++
Sbjct: 65  KLIAALPADEQVSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAVQRVVVD 123

Query: 127 FVSANPTGPMHVGHCRCAV 145
             + N    MHVGH R  +
Sbjct: 124 LSAPNLAKEMHVGHLRSTI 142


>gi|294865901|ref|XP_002764512.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239864073|gb|EEQ97229.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 186

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 17/180 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      +G  SVR+  L +  +    F+F K+ +  K N   ++ YAYAR  SI 
Sbjct: 22  TEEEFDRASKIIGVASVRYFDLRQNRTTNYIFNFDKMLD-PKGNTAVFLLYAYARICSIL 80

Query: 466 RQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
           R+A  D    LD+      +       +  E  L + +  +  V+++     + ++L  Y
Sbjct: 81  RKANFDYHSGLDYSSEEVVI------TEEKERSLALEILRFAEVMQSVLSDLQCHRLCEY 134

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           ++DL + F   ++  +       V  ++++    RL L  A   ++    +I+ +     
Sbjct: 135 MWDLTNRFTAFYTECK-------VVGSDQE--RSRLLLCEATRRVLAQCFDILDITPLER 185


>gi|4582967|gb|AAD24873.1|AF073777_1 arginyl-tRNA-synthetase [Neisseria meningitidis]
          Length = 170

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 20/175 (11%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           R +   VG  +V++  L +       FD+  +    + N   Y+QYAY R +S+FR+A +
Sbjct: 16  RKIGKTVGIGAVKYADLSKNRHPDYVFDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGE 74

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
              +    L            +  E QL   L ++  V+++      P+ LA YLY +A+
Sbjct: 75  WDANAPTVL-----------TEPLEKQLAAELLKFEDVLQSVRGHAYPHYLAAYLYQIAT 123

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +F   +           ++A        RLQL       +  GL+++G++  + M
Sbjct: 124 LF-SLYEAC------PILKAEGAS-RNSRLQLAKLTGDTLKQGLDLLGIDVLDVM 170


>gi|256081682|ref|XP_002577097.1| arginyl-tRNA synthetase [Schistosoma mansoni]
 gi|238662392|emb|CAZ33334.1| arginyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 494

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 83/520 (15%), Positives = 161/520 (30%), Gaps = 112/520 (21%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                V +++ S N   P H+GH R  V G+ + ++    G++V    YI D G Q + L
Sbjct: 29  NHSETVVVDYSSPNIAKPFHLGHFRATVTGNFVKNVNEAFGHKVIGINYIGDWGTQFDIL 88

Query: 178 A--LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK---YSSELLNFPE------ 226
           A   S +    +   N    L + Y           E +     + +E +N  +      
Sbjct: 89  ASGFSKYGDEIELRRNPIEHLYKVYVQANRDIQSSNEKSRHGIDHGNESVNLSKPILNNT 148

Query: 227 ---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
              +        Y  +   + +  + + +NI+   +  E D+          + + L   
Sbjct: 149 TEIQSRDTEFWRYIRKVTCEQLESNYQRMNIRFTSYEYESDY----VEKAYSLANMLLAN 204

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL----A 339
           G  Y+ +                       +M+GDDV            Y   D      
Sbjct: 205 GLAYKSL-----------------------SMIGDDV------------YDNTDNDQCSQ 229

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
             +      F  ++        G   R       +      +N     ++   +     +
Sbjct: 230 CARNLLHIPFGRIM--------GMSTRKGEGLFLL----DILNNAQQFMLNRMKGSQNTR 277

Query: 400 MSKRA---GDFITLRHVVDEVGSDSV---RFMMLWRKNSELLDF--------DFCKVKEQ 445
           +++        +    + D +G   +    F    +K   L  F           K    
Sbjct: 278 LTQNESVNPSLLCQNEIADHLGVTCLVTTMFAYPRQKPINLQTFLGLPVTSTPTMKCSHL 337

Query: 446 SKENPVF-----YVQYAYARCRSIF-------------RQAKDIFPDLDFDLF-----PR 482
            K +PV       +QY +AR  S+                +       D D         
Sbjct: 338 LKSSPVSELCGLTLQYCHARLCSLESRSISSGLFPFKVNNSDPTSMAFDTDQLIHVFDQF 397

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
              P  +  + S ++L   L  +  V+  A    EP+ +  Y   L S  +  W H    
Sbjct: 398 TEWPSTTVNEKSFVKLADQLCRFSTVLHTAYSKYEPHYVLQYALQLTSDVNSAWKH---- 453

Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
             L  +   N++  ++RL +  A  +++ S L ++G+   
Sbjct: 454 --LPVLTCTNKEDQLIRLFIFLASRNVLASCLRLMGIRPL 491


>gi|255079666|ref|XP_002503413.1| predicted protein [Micromonas sp. RCC299]
 gi|226518679|gb|ACO64671.1| predicted protein [Micromonas sp. RCC299]
          Length = 481

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 92/479 (19%), Positives = 178/479 (37%), Gaps = 90/479 (18%)

Query: 80  SVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138
            V   G  ++NL++  +   R ++ ++   G ++G      G +V IE  S+NP  P+H+
Sbjct: 4   KVQGVGP-YLNLFVDRARVFRLVIRAVSAQGDKFGHTKAAGGKRVIIEHTSSNPNAPLHI 62

Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           G+ R  ++G  LA + A  G+ V + +Y+ND GAQI   AL+    Y +       D   
Sbjct: 63  GNLRNVMIGAHLAKMQAACGFAVKQAFYVNDLGAQIGLTALAYSRVYAKIQPYLKIDHWI 122

Query: 199 GYYP------------GVYLK----------------HVGKELADKYSSELLNFPEEKW- 229
           G               G YLK                 + ++L +++   ++   E+   
Sbjct: 123 GAMYAVMNTCQELQQVGEYLKGAEGDEKKTKGITEYFDIYQDLRERFEKMMVVMLEDVRK 182

Query: 230 --------------LPIVKDYSVQAMMKIIRD-------DLKALNIQHDIFISEDDFHRG 268
                             + ++V+   K++ D        L    +QHD F  E +   G
Sbjct: 183 IENIKVEAGKLNLAYERQEAWAVKIFRKMVCDCLTGVQTTLSTYGVQHDQFDFESEL--G 240

Query: 269 DPSPIRDIIDNLARQG-YVYEGILPPPKSKTTQKCDMDR-----KQLLFRSTMVGDDVDR 322
                  +++ +     YV +              DMD         + +     D    
Sbjct: 241 WEGSNNKVLEIMKNSDYYVPQTQCNDKGVPQGAYLDMDGFIRDQGLKVGKGGYQKDYPPL 300

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQI 381
            +L+ DGS  Y   D+ Y   K  +  D ++ ++ S+     +++      ++ + K + 
Sbjct: 301 YVLRPDGSTLYTYRDIVYSFKKASQS-DLILNIICSEQDLAQQKVSLGMMMMNPEMKGRQ 359

Query: 382 NVLLCELVRLYRDGMP---------------------IKMSKR---AGDFITLR---HVV 414
             L  +LV+L    M                       KMSK+    G+ I+      V 
Sbjct: 360 YHLSYDLVKLTTGKMSGRRGRYLLADDLYDDLKTVIREKMSKKFKDKGEDISPELFDEVT 419

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            EV + ++++ +L       ++FD  K+ +  ++    ++ Y   R  S+ R+  D   
Sbjct: 420 HEVSTAAMKYALLSVSCQTQINFDIAKITDF-EDASAPFILYNSTRVASVVRKFNDKVE 477


>gi|297810839|ref|XP_002873303.1| hypothetical protein ARALYDRAFT_349990 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319140|gb|EFH49562.1| hypothetical protein ARALYDRAFT_349990 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 17/181 (9%)

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
            R      L    + +G   V+F  L         F + ++    K     Y+ YA+AR 
Sbjct: 251 SRTESNKELDLTAEAIGYSVVKFADLKNNRLSSYTFSYDQML-CDKGKTAVYLHYAHARI 309

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            SI R++       D D   +         D  E  L +HL  +   +E A     P+ +
Sbjct: 310 CSIIRKSGK-----DIDELKKAGKLALDHAD--ERALGLHLLRFSETVEEACTKLLPHLV 362

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
             YLY L+      + + +       V  +  +    RL L  A   ++    +++G+  
Sbjct: 363 CEYLYGLSEQCSKFYHNCQ-------VIGSAEE--TSRLLLCEATGIVMRKCFHLLGITP 413

Query: 582 P 582
            
Sbjct: 414 V 414



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 135/361 (37%), Gaps = 48/361 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPR--DCAHGHLSTNAAMILSRPLGLDPL- 62
           +    LK     +   IK +  + +   +   +  +   G    N  M       L P  
Sbjct: 13  NLKRELKKLFL-LALGIKPDDALAEEFSLVASKGPNRKVGDYQCNDIM-----HKLAPKP 66

Query: 63  ---TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
                  LIV+       V S  + G GFIN+ +S  ++ K + +++++GI+     +  
Sbjct: 67  SQSDFTRLIVSNFPASEMVKSCSVTGCGFINVVISSDFMAKSIENMLINGIDTWAPTL-P 125

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             +  ++F S +    +HVGH R  ++GDT+A L+ +S  +V R  ++ D G Q+  +  
Sbjct: 126 VKRAVVDFYSPSIAKQLHVGHLRSPIIGDTIARLLEYSKVQVVRRNHVGDWGTQLGLIIE 185

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +F  +      ND+ +   Y   +Y+K                F E+   P+ K+ + +
Sbjct: 186 YLFEDFPGL--PNDAVITIEYIEALYIKSKA------------KFDED---PVFKEKAKR 228

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287
           A++++ R     +     I          +     + I            + L+   + Y
Sbjct: 229 ALVRLQRGSPVYVKAWAKICEISRTESNKELDLTAEAIGYSVVKFADLKNNRLSSYTFSY 288

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD---LAYFKCK 344
           + +L   K KT         ++       G D+D   LK  G      AD   L     +
Sbjct: 289 DQMLCD-KGKTAVYLHYAHARICSIIRKSGKDIDE--LKKAGKLALDHADERALGLHLLR 345

Query: 345 Y 345
           +
Sbjct: 346 F 346


>gi|325118008|emb|CBZ53559.1| putative arginyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 944

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 47/258 (18%)

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416
           R +   A  S +   +  L    V + ++    KM  RAG    L  ++ +         
Sbjct: 692 RPDGACAKRSFRDDALTELTHVAVGIVKNPAGTKMKSRAGSAPLLADLLRDAIRQAEGTL 751

Query: 417 ----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                                       +G  +V++  L  +      F   K+    K 
Sbjct: 752 GRRTNECLHARTSDAADGPEGCRDKARILGIAAVKYAELSTRRDVDYVFSPDKMLS-PKG 810

Query: 449 NPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           N   Y+ Y+  R + I R+A     +  +L      ++ I      +  + QL V L  +
Sbjct: 811 NTAPYILYSLVRVKGILRRAGWTAGVPTELHGHNNLQSDIVYHLHQNGLDRQLAVRLLGF 870

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              +++A     P KL  YLY L   F+  +            +A +  L + RL LVH 
Sbjct: 871 AMAVQDAIETLMPSKLTAYLYSLCLAFNAFYEKCE------VTKAVDEGLRLTRLLLVHG 924

Query: 566 VASIINSGLNIIGVESPN 583
           V  I+ + L+++G+++ +
Sbjct: 925 VRQILETSLDLLGIQAVD 942



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--LDPLTI 64
           F  RL+N +       ++   I   +        +     ++ A+ LS   G    P  I
Sbjct: 41  FEDRLRNAISIAMGGDELRDDIPIMVTEAIAPARSIFDFQSSIAISLSGRGGGVQSPEAI 100

Query: 65  AELIVARIK-----IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV---VSGIEYGRNL 116
           AE ++  ++     ++P V+   ++G+GFIN  LS  YL   L ++      G   G   
Sbjct: 101 AEGLLNNLQSERRLLEPVVELTGVSGRGFINFRLSAGYLAARLVNMFLSPKEGTRLGFPK 160

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +    +V +++ S N    +HVGH R AVVGD LA+L+ F+G+ V R+ ++ D G
Sbjct: 161 VLTPERVVVDYASPNICKDLHVGHLRSAVVGDALANLLEFAGHRVVRQNHLGDFG 215



 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 2/97 (2%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY-TYFAADLA 339
             +    E      K +     +   K       +  D  D  +LK  G+  TY A DLA
Sbjct: 483 EAKEEGCEDSAANAKQEEACGLEATGKGRGRIDEIEPDLRDVVVLKKRGATVTYSATDLA 542

Query: 340 YFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
               +      D ++YV+ S  + + +R+ ++A A  
Sbjct: 543 AALHRSAYLQADRVLYVVDSAQASHFQRVFSLAHASG 579


>gi|126466471|ref|YP_001041580.1| DALR anticodon binding domain-containing protein [Staphylothermus
           marinus F1]
 gi|126015294|gb|ABN70672.1| DALR anticodon binding domain protein [Staphylothermus marinus F1]
          Length = 770

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 86/516 (16%), Positives = 185/516 (35%), Gaps = 83/516 (16%)

Query: 131 NPTGPMHVGHCRCAVVGDTL------ASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           N      + H    ++ +++        +++  GY+   +YY                  
Sbjct: 275 NLLKKYRIKHYIGEIITESIKSIEKIVKILSSKGYKHISKYYEEKHDELKKYEKKYKDLL 334

Query: 185 YQQALYNNDSDLPEGYYPGVYLK--------HVGKELADKYSSELLNFPEEKWLPIVKDY 236
            +Q  Y++  +     YP +Y+            +E   KY  +     EE  + + ++ 
Sbjct: 335 MEQNEYSDSENKFAETYPELYVALKKNITDPDKAEEEIRKYMKKYEEGDEEVGV-LFREV 393

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           S Q  +K  R+ L  L I  D +  E          IR++  N+ R+    E +    + 
Sbjct: 394 SEQT-LKGFRETLSRLGIVFDSYDWESSH------IIRELAWNVIRES---EKLPYSSRE 443

Query: 297 KTTQKCDMDRKQ--LLFRSTMVGDDVD--RPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351
           +     D+D+     LF   + G D      + +SDG+  Y   D+AY   K++  G   
Sbjct: 444 EGALIIDLDKAAEEHLFIKKLFGKDQPGKLVVQRSDGTSLYTTRDIAYSIYKFKYLGASK 503

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +  V+  + +   K+++A    +  +    ++     E+V L      ++MS R G + +
Sbjct: 504 VYNVIAVEQTREQKQVKATLYLLGYRDEAEKLVHFTYEMVNL----KGMRMSGRRGQYYS 559

Query: 410 LRHVVDE-------------------------VGSDSVRFMMLW----RKNSELLDFDFC 440
           L  ++++                         +  D ++ +          + LL  D  
Sbjct: 560 LDELLEDYVKAIAKSYVESQIKRIGGLESSIPINLDELKKVFEKLAVADSRALLLSIDPS 619

Query: 441 KVKEQS-----KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN-------VIPQE 488
           KV         + N   ++ Y + R + I R+   + P  + D            +  +E
Sbjct: 620 KVLTFDHRRLEEYNMGSWILYTFVRLQGILRKWLGVEPLTNIDKLLVEANKLYNTLKNKE 679

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
            + +  E  ++ +L EYP ++  +    +P KL  Y  +L    +  +        +  +
Sbjct: 680 IDLNLLERNILENLLEYPSILYKSYSELKPNKLLEYTSNLCMNINKLYE------TVPVL 733

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              ++     R+ LV     I+   + I+G  +  +
Sbjct: 734 GEKDQYKRSFRILLVIVTTLILKDLVEIMGFPTITK 769



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 132/339 (38%), Gaps = 31/339 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKIL-------DRIVIERPRDCAHGHL--STNAAMILSRPL 57
            S  L+N L E    +  E + +        RI I +  D   G    + +      R  
Sbjct: 8   VSDCLENILVEALSSVLGEDEKVVREYFSSKRIKITKTPDPKLGDYGLALHYLFHKYRIS 67

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIA----GKGFINLYLSPSYLRKILSSIVVSGIEYG 113
             D   IA  I+  ++    +   + +      G+IN Y+  + ++ I+    +S   + 
Sbjct: 68  RDDWENIASRIINYLESRGLLGKCYASRAEYVNGYINFYIDYNLMKDIIFENYLSKKIFD 127

Query: 114 RNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           +     KG K+ +E  SANP  P+HVG  R AV+G+T A+L+ + G+ V   +Y+ND G 
Sbjct: 128 QIKSFGKGEKIVVEHTSANPVHPLHVGSGRNAVIGNTYANLLRYLGFNVEERFYVNDMGR 187

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVY----------LKHVGKELADKYSSELL 222
           Q+  L         + L    +   + +   +Y          +      + ++     L
Sbjct: 188 QVAVLVYGYRIVKNEKLVPPPNMKIDHWIGAIYALTNILIHKLVVEREIHVLEEKLRGEL 247

Query: 223 NFPEEKWLPIVKDYSVQAMMKI---IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                +    +++ ++  ++++   I + LK   I+H  +I E          I  I+  
Sbjct: 248 ETILRETEKFMENNNLYPLVELSITIENLLKKYRIKH--YIGE--IITESIKSIEKIVKI 303

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           L+ +GY +       K    +K +   K LL       D
Sbjct: 304 LSSKGYKHISKYYEEKHDELKKYEKKYKDLLMEQNEYSD 342


>gi|270693073|ref|ZP_06222954.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316008|gb|EFA28051.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 237

 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 3/163 (1%)

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            IAG GFIN++L+P++L   +S+ +       +        V I++ S N    MHVGH 
Sbjct: 1   EIAGPGFINIFLNPTWLTTEISAALSHKNLGIQ--ATNKQTVVIDYSSPNVAKEMHVGHL 58

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGY 200
           R  ++GD +   + F G+ V R  ++ D G Q   L   +   + + A      DL   Y
Sbjct: 59  RSTIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNEHASEMELQDLEAFY 118

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                     +  A+K  + +    E  +  +  D +  A + 
Sbjct: 119 REAKKHYDEDEIFAEKARNYIEELAENVYRQLDPDVATGAWLD 161


>gi|297157207|gb|ADI06919.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 332

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           I+   ++  +GSD+ R+ +L     +L D D  ++  Q + NP+F V+YA++R R++ R 
Sbjct: 163 ISAEELLGLLGSDASRWALLRAAAHDLPDLDPGRLLAQRESNPLFRVRYAHSRVRALLRN 222

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
             D+  D D      +          + + LI  L +YPR++E+A   + P +LA +L  
Sbjct: 223 GVDLGVDPDSSRSADSAYDH-----PTAVALISLLGDYPRLLESAARHRAPDRLARHLEA 277

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
            A  F          P L   +         RL L  A  +++  GL+++G+ +P 
Sbjct: 278 TADAFFRF---HDACPPLPRGEQKPLAAHRSRLALAEAAGTVLAGGLHLLGISAPE 330



 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 6/119 (5%)

Query: 13  NYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLD--PLT---IAE 66
             ++      ++   +L +R+ ++ P     G  +TN A+ L++ +  D  P     +AE
Sbjct: 3   QTVRRAVEADELRVAVLPERVKVQAPPRAGCGDYATNVALQLAKLVKGDGGPAVALRVAE 62

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           ++  R+ + P +  V IAG GF+N+ +       ++  ++  G +YGR+    GT V +
Sbjct: 63  VLRRRLVVTPGIAGVEIAGPGFLNITVDSGGHAALVRGVLERGEDYGRSDALAGTLVRL 121


>gi|207092413|ref|ZP_03240200.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 186

 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 17/197 (8%)

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R  +D  P KMSKRAG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   N
Sbjct: 4   RTLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSN 63

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           P++Y+ YA +R  ++  ++     ++        +       +  E  L+      P+ +
Sbjct: 64  PIYYIHYANSRIHTMLEKSPFSKEEV--------LQTPLKNLNAEEKYLLFSALSLPKAV 115

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           E++       K+  Y   LAS FH  ++ G+           +       L++   V+  
Sbjct: 116 ESSFEEYGLQKMCEYAKTLASEFHRFYNAGKIL---------DTPKAKELLKICLMVSLS 166

Query: 570 INSGLNIIGVESPNEMS 586
           + +   ++G+E   ++S
Sbjct: 167 LTNAFKLLGIEIKTKIS 183


>gi|294669638|ref|ZP_06734705.1| hypothetical protein NEIELOOT_01539 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308551|gb|EFE49794.1| hypothetical protein NEIELOOT_01539 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 131

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 19/149 (12%)

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           FD+  +    + N   Y+QYAY R +S+FR+A +            +        +  E 
Sbjct: 2   FDWDAMLSF-EGNTAPYLQYAYTRVQSVFRKAGEW-----------DATAPTVLTEPLEK 49

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           QL   L ++  V+++      P+ LA YLY +A++F   +           +  +     
Sbjct: 50  QLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEAC-------PILKSEGTTR 102

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RLQL       +  GL+++G++  + M
Sbjct: 103 NSRLQLAKLTGDTLKQGLDLLGIDVLDVM 131


>gi|46204895|ref|ZP_00209614.1| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 160

 Score =  136 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +FA F +R++  L+ +    ++ + + L R+++E PRD +HG L+TNAA++L++    
Sbjct: 1   MNIFALFETRVREALESLIRSGRLPEGLDLSRVLVEPPRDPSHGDLATNAALVLAKEAKQ 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
           +P  + E +   ++ DP V    +AG GFINL L P    +++ + +  G  YGR  +  
Sbjct: 61  NPKALGEALAEELRGDPRVSEASVAGPGFINLRLVPEVFHEVIRAALKDGEAYGRAQMAA 120

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCA 144
                    S +P  P   G C  A
Sbjct: 121 ARST----SSTSP--PTRPGRCMSA 139


>gi|296242193|ref|YP_003649680.1| arginine--tRNa ligase [Thermosphaera aggregans DSM 11486]
 gi|296094777|gb|ADG90728.1| Arginine--tRNA ligase [Thermosphaera aggregans DSM 11486]
          Length = 750

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 80/435 (18%), Positives = 162/435 (37%), Gaps = 79/435 (18%)

Query: 203 GVYLKHVGKELADKYSSELLNFPEEK-------WLPIVKDYSV--------QAMMKIIRD 247
           G YL  V  E+ +  S E+ ++ E +       W    +D           + ++    +
Sbjct: 331 GSYLNSVNPEVYNTLSREISSYEEAEEEIKSLMWKAEHRDPEALGLIHQVSRDVLSGFME 390

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMD 305
            LK   +  D F  E        +  +DI++ +   GY  + +G +    +K  Q+ +  
Sbjct: 391 TLKNYGVFFDGFDFESS--DEIVNMSQDIVEKILATGYANMVDGAVELDLNKAAQQVE-- 446

Query: 306 RKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363
                 R+    D+  R  + +SDG+  Y   D+AY   K+ +   + +  V+  +    
Sbjct: 447 ----FVRNLFAPDNPGRFIVRRSDGTTLYVTRDIAYSIIKFSKYNAEKVYNVIAIEQDRA 502

Query: 364 VKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------- 414
            K+L A    +   K    +     E+V+L      ++MS R G + T+   +       
Sbjct: 503 QKQLRAALKILGFDKEAENLVHFAYEMVQL----KNMRMSGRRGIYYTMDEFLVEMTRAL 558

Query: 415 ------------------------DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                                    E+   + R ++L  +  ++L FD  K+ E      
Sbjct: 559 VEKQVSQSQRKGVADDSATGSSYTRELAVANARALLLSVEPGKVLFFDPEKIGEFEHGVT 618

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV---IPQESEFDTS---ELQLIVHLAE 504
              + Y++AR +SI R+     P    +   R +   I      + +   E +LI  L  
Sbjct: 619 ---IAYSFARLQSILRKQWGFEPLESLEEVKRRLSQEITAHGISEPATVEEKKLIEWLNA 675

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
           + + +  A    +P +L  Y ++LA   +  +           +   + ++  +RL LV 
Sbjct: 676 FSQTLIIAYEEMKPNRLLEYAHNLALDLNRFYEKC------SVIGEKDLRVKNLRLLLVL 729

Query: 565 AVASIINSGLNIIGV 579
           A    ++  + I+G+
Sbjct: 730 ASFIALSELMEILGI 744



 Score = 95.0 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 30/268 (11%)

Query: 31  RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR------------IKIDPDV 78
           R+ I R  D   G      A+ +   L   P                       K +  +
Sbjct: 36  RLKINRTPDPKMGDYG--IALHI--LLKNTPRD---QWARMGEQLLEELERLGFKQECRI 88

Query: 79  DSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
                   G++N+ +  S +   +L   +  G +   +  G G  + +E  SANP  P+H
Sbjct: 89  LEAKFVN-GYLNVTIDYSSIISNLLKEFLEDGFKKTLSSYGGGRTIVVEHTSANPVHPLH 147

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +G  R +++GDT + L    G+ V   +Y+ND G Q+  LA  V    +  +        
Sbjct: 148 IGSGRNSIIGDTFSKLSKKLGFNVVTRFYVNDLGRQVAVLAYGVSKLRKNNITPPGDVKI 207

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA---LNI 254
           + +Y  VY       +  K S+EL +  EE +  +      +  ++  R+ LK+   L+ 
Sbjct: 208 DHWYGMVYASVNIIMMIRKLSNELRSIEEEVYSKL------KLYVESNRERLKSTPLLSA 261

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLAR 282
             + FIS           + +    L R
Sbjct: 262 HLESFISIKPLVHNSFKKLAEFSRGLRR 289


>gi|237837873|ref|XP_002368234.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965898|gb|EEB01094.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221508998|gb|EEE34567.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 861

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 91/268 (33%), Gaps = 49/268 (18%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G +H  +    +           Q+  ++   V L ++    KM  R G    L  ++
Sbjct: 602 VAGREHRRHGGACKNQCLHRDSPGTQLEHVI---VGLVKNTEGTKMKSREGQAPHLAGLL 658

Query: 415 DE------------------------------------VGSDSVRFMMLWRKNSELLDFD 438
            +                                    +G  +V++  L  +      F 
Sbjct: 659 QDAIRHAEGNLGRRTDDGPLSVAPDAGRPEDRHTKARILGIAAVKYAELSTRRDVDYVFS 718

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ---ESEFDTSE 495
             KV    K N   Y+ Y+  R + I R+A              N++         +  +
Sbjct: 719 PEKVLS-PKGNTAPYILYSLVRVKGILRRAGWAAGIPSELRGKPNLLSDMVYHLHRNDLD 777

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            QL V L  +   IE+A     P KL  YLY +  +F+  +            +A +  L
Sbjct: 778 RQLGVRLLGFAIAIEDAIQTLMPSKLTAYLYSVCLLFNAFYEECE------VTKATDEGL 831

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPN 583
            + RL LVH V  ++   L+++G+++  
Sbjct: 832 RLTRLLLVHGVRQVLEKCLDLLGIQAVE 859



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)

Query: 44  HLSTNAAMILSRPLG--LDPLTIAELIVARIKID-PDVDSVF----IAGKGFINLYLSPS 96
              ++ A+ LS   G       IAE ++  ++ +   ++ V     ++G+GFIN  LS +
Sbjct: 26  DFQSSIAISLSGRGGGAQSAEAIAEGLLNNLENERQLLERVVSLTGVSGRGFINFRLSSN 85

Query: 97  YLRKILSSIV---VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           YL   L  ++    SG   G   +    ++ +++ S N    +HVGH R AVVGDTLA+L
Sbjct: 86  YLASRLVDMLLNTESGSCLGFQKVETPERIVVDYASPNICKDLHVGHLRSAVVGDTLANL 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + F+G+ V R  ++ D G  +  +  ++     +   +            V  + +  EL
Sbjct: 146 LEFAGHRVFRHNHLGDFGWPVALVLGALADAELRERPD------VQALNEVLEQRIRDEL 199

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             K         E++     +     A  +  +D
Sbjct: 200 EHKEGERAREESEDEGSKQNEQERKGAAREGSKD 233



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 314 TMVGDDVDRPLLKSDGSY-TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA 371
             +G   D  +LK  G+  TY A DLA    +      D ++YV+ S    + KR+ ++A
Sbjct: 451 EEIGFSGDIVVLKKPGNAVTYAATDLAAILYRSASLQADRVLYVVDSAQDSHFKRVFSLA 510

Query: 372 AAVS 375
            A  
Sbjct: 511 RAAG 514


>gi|221488492|gb|EEE26706.1| hypothetical protein TGGT1_113470 [Toxoplasma gondii GT1]
          Length = 861

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 91/268 (33%), Gaps = 49/268 (18%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G +H  +    +           Q+  ++   V L ++    KM  R G    L  ++
Sbjct: 602 VAGREHRRHGGACKNQCLHRDSPGTQLEHVI---VGLVKNTEGTKMKSREGQAPHLAGLL 658

Query: 415 DE------------------------------------VGSDSVRFMMLWRKNSELLDFD 438
            +                                    +G  +V++  L  +      F 
Sbjct: 659 QDAIRHAEGNLGRRTDDGPLSVAPDAGRPEDRHTKARILGIAAVKYAELSTRRDVDYVFS 718

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ---ESEFDTSE 495
             KV    K N   Y+ Y+  R + I R+A              N++         +  +
Sbjct: 719 PEKVLS-PKGNTAPYILYSLVRVKGILRRAGWAAGIPSELRGKPNLLSDMVYHLHRNDLD 777

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            QL V L  +   IE+A     P KL  YLY +  +F+  +            +A +  L
Sbjct: 778 RQLGVRLLGFAIAIEDAIQTLMPSKLTAYLYSVCLLFNAFYEECE------VTKATDEGL 831

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPN 583
            + RL LVH V  ++   L+++G+++  
Sbjct: 832 RLTRLLLVHGVRQVLEKCLDLLGIQAVE 859



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)

Query: 44  HLSTNAAMILSRPLG--LDPLTIAELIVARIKID-PDVDSVF----IAGKGFINLYLSPS 96
              ++ A+ LS   G       IAE ++  ++ +   ++ V     ++G+GFIN  LS +
Sbjct: 26  DFQSSIAISLSGRGGGAQSAEAIAEGLLNNLENERQLLERVVSLTGVSGRGFINFRLSTN 85

Query: 97  YLRKILSSIV---VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           YL   L  ++    SG   G   +    ++ +++ S N    +HVGH R AVVGDTLA+L
Sbjct: 86  YLASRLVDMLLNTESGSCLGFQKVETPERIVVDYASPNICKDLHVGHLRSAVVGDTLANL 145

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + F+G+ V R  ++ D G  +  +  ++     +   +            V  + +  EL
Sbjct: 146 LEFAGHRVFRHNHLGDFGWPVALVLGALADAELRERPD------VQALNKVLEQRIRDEL 199

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             K         E++     +     A  +  +D
Sbjct: 200 EHKEGERAREESEDEGSKQNEQERKGAAREGSKD 233



 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 314 TMVGDDVDRPLLKSDGSY-TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA 371
             +G   D  +LK  G+  TY A DLA    +      D ++YV+ S    + KR+ ++A
Sbjct: 451 EEIGFSGDIVVLKKPGNAVTYAATDLAAILYRSASLQADRVLYVVDSAQDSHFKRVFSLA 510

Query: 372 AAVS 375
            A  
Sbjct: 511 RAAG 514


>gi|297526805|ref|YP_003668829.1| Arginine--tRNA ligase [Staphylothermus hellenicus DSM 12710]
 gi|297255721|gb|ADI31930.1| Arginine--tRNA ligase [Staphylothermus hellenicus DSM 12710]
          Length = 770

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 81/523 (15%), Positives = 177/523 (33%), Gaps = 97/523 (18%)

Query: 131 NPTGPMHVGHCRCAVVGDTL------ASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           N      + H    ++ +++        +++  GY+   +YY                +R
Sbjct: 275 NLLKKYRIKHYVGEIITESIRSIEKTVKILSSKGYKQISKYY---EEKHGELKNYEKKYR 331

Query: 185 ----YQQALYNNDSDLPEGY---YPGVYLKHVGKELADKYSSELL---NFPEEKWLPIVK 234
                Q    ++++   E Y   Y  +       + A++   + +      +E+   + +
Sbjct: 332 DLLMEQNEYSDSENRFAETYPELYVALKKYITDPDKAEEEIRDYMRRYEGGDEEVGALFR 391

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           + S +  +K  ++ L  L I  D +  E              I        + E    P 
Sbjct: 392 EVS-EHTLKGFKETLSRLGIVFDAYDWESSH-----------IIRELAGNVIRESEKLPY 439

Query: 295 --KSKTTQKCDMDRKQ--LLFRSTMVGDDVD--RPLLKSDGSYTYFAADLAYFKCKYE-R 347
             +       D+D+     LF   + G D      + +SDG+  Y   D+AY   K++  
Sbjct: 440 SRREGGALIIDLDKAAEEHLFIKELFGKDQPGKLVVQRSDGTSLYTTRDIAYSIYKFKHL 499

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G   +  V+  +     K+++A    +    +  ++     E+V L      ++MS R G
Sbjct: 500 GASKVYNVIAVEQIREQKQVKATLYLLGYGGEAEKLVHFTYEMVNL----KGMRMSGRRG 555

Query: 406 DFITLRHVVDE-------------------------------------VGSDSVRFMMLW 428
            + +L  ++++                                     +     R ++L 
Sbjct: 556 QYYSLDELLEDYVKAIAKSYVKSQIKRIGGLESSTPIDLGELRNVFEKLAVADSRALLLS 615

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ- 487
              S++L FD  +++E    N   ++ Y + R + I R+   + P  + D          
Sbjct: 616 IDPSKVLTFDPRRLEEY---NMGSWILYTFVRLQGILRKWLGVEPLTNIDKLLVEAKKLY 672

Query: 488 ------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
                 E +    E  ++ +L EYP  +  +    +P KL  Y  +L    +  +     
Sbjct: 673 GTVKNKEIDLSVLERNILENLLEYPSTLYKSYQELKPNKLLEYTSNLCMNINKLYES--- 729

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
              +  +   +      R+ LV   A I+   + I+G  +  +
Sbjct: 730 ---VPVLGEKDPYKKSFRILLVIIAALILKDLIEIMGFPTITK 769



 Score =  116 bits (292), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 19/335 (5%)

Query: 7   FSSRLKNYLKEI---DCKIKVEKKILDRIVIERPRDCAHGHL--STNAAMILSRPLGLDP 61
               L   L  +   D K+  E     RI I +  D   G    + +      R    D 
Sbjct: 12  LEKILVEALSSVFGEDEKVIKEYFSSKRIKIAKTPDPKLGDYGLALHYLFHKYRVGRDDW 71

Query: 62  LTIAELIVARIKIDPDVDSVFIA----GKGFINLYLSPSYLRKILSSIVVS-GIEYGRNL 116
            TIA  I++ ++    +D  ++       G+IN Y+  + ++ +L    +S  I      
Sbjct: 72  ETIASKIISYLENRGLLDKCYVRKAEYVNGYINFYIDYNLMKNVLFENYLSMKIFDQIKS 131

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
            G G KV +E  SANP  P+HVG  R AV+G+T A+L+ + G+ V   +Y+ND G Q+  
Sbjct: 132 FGDGEKVVVEHTSANPVHPLHVGSGRNAVIGNTYANLLRYMGFNVEERFYVNDMGRQVAV 191

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVY------LKHVGKELADKYSSELLNFPEEKWL 230
           L         + L    +   + +   +Y      +  +  E    +  E L    E  L
Sbjct: 192 LVYGYRIVKNEKLAPPQNMKIDHWIGAIYALTNILIHKLEIERETHFLEEKLYMELEAIL 251

Query: 231 PIVKDYSVQAMMK---IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              + +     +     +   +  L  ++ I     +        I   +  L+ +GY  
Sbjct: 252 EQTRKFMENNNLYPLVELYITMDNLLKKYRIKHYVGEIITESIRSIEKTVKILSSKGYKQ 311

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
                  K    +  +   + LL       D  +R
Sbjct: 312 ISKYYEEKHGELKNYEKKYRDLLMEQNEYSDSENR 346


>gi|289672020|ref|ZP_06492910.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 236

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 92/221 (41%), Gaps = 14/221 (6%)

Query: 74  IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133
            +     V IAG GF+N + + +          ++         G   +V ++  + N  
Sbjct: 1   AEEQGSKVEIAGPGFLNFFQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLA 59

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
             MHVGH R  ++GD +A+++ F G  V R+ ++ D G Q   L    + + + A  +  
Sbjct: 60  KEMHVGHLRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDEL 117

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           SDL E +Y     +    E   + +  L   L   + + L +   +   + +   ++  +
Sbjct: 118 SDL-ENFYRAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDIS-LSHCQETYE 175

Query: 251 ALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            LN++      + E  ++      + +++++L   G + E 
Sbjct: 176 RLNVKLTPADVMGESAYN----DDLANVVNDLKATGLLVES 212


>gi|971336|emb|CAA90040.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 115

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 12/127 (9%)

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           AR  S+ RQ ++        L P   +         E  L+  +  +P  +  A   + P
Sbjct: 1   ARICSMLRQGEEQG------LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIP 54

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++  Y+YDLAS  H  ++        + +   N + +  RL L+ A    +N+ L +IG
Sbjct: 55  HRVTNYIYDLASALHSFYNAE------KVIDPENEEKSRARLALMKATQITLNNALQLIG 108

Query: 579 VESPNEM 585
           V +P +M
Sbjct: 109 VSAPEKM 115


>gi|324512866|gb|ADY45313.1| Arginyl-tRNA synthetase [Ascaris suum]
          Length = 361

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/383 (17%), Positives = 138/383 (36%), Gaps = 66/383 (17%)

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +  D   +  M+ + +  + L I+ D+   E +    +     ++ID L  +G       
Sbjct: 16  LFWDEVRKISMRHLDEFYRRLRIKFDVTSPESE----NVKKAHELIDGLLNKGIARLAA- 70

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFD 350
                             + +   +       + KSD S  Y + +LA    + E    D
Sbjct: 71  --------------DGITIVKDDRIEGYA--AIRKSDNSSLYLSRELASILRREELYAAD 114

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + I+V+    S + + L+ + + +          L   +     G    +S R G    +
Sbjct: 115 SYIFVVDRAQSRHFELLKNLLSIIERDD------LSAKIHHIPFGRVKGLSTRKGRTEAV 168

Query: 411 RHVVD---EVGSDSVRFM-------------------------MLWRKNSELLDFDFCKV 442
             ++D   E+ +D VR                            L R  +    F F   
Sbjct: 169 DEIIDRGCELAADFVRKSKTIKIDESQIQDTALNLSLSTIIVNDLKRSRNSEYIFSFNDA 228

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              ++ N    +Q  ++R  S+ ++ +++  +LD +  P   +  E E      +L+ HL
Sbjct: 229 FHLNQSN-ALLLQMKHSRLVSLEKRNEELMHELDAEKDPE--VALELELGEETRRLVAHL 285

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++   + ++    EP ++  YL  LA++       G     LR V        + RL L
Sbjct: 286 WQFDEALFSSWQKMEPCRVTVYLLQLANL------VGSAIASLR-VMGEPHDRALSRLLL 338

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             A   ++  G+ +IG+E  ++M
Sbjct: 339 FAAARGVLKEGMKLIGLEPLDQM 361


>gi|123387375|ref|XP_001299401.1| DALR anticodon binding domain containing protein [Trichomonas
           vaginalis G3]
 gi|121880240|gb|EAX86471.1| DALR anticodon binding domain containing protein [Trichomonas
           vaginalis G3]
          Length = 689

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/422 (16%), Positives = 156/422 (36%), Gaps = 61/422 (14%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A K + +  +   E  + I++     + +  I+  L   N+ HD F  E +      S
Sbjct: 281 DVAAKLNKDYEDKKPEA-VAIIRQ-MTNSTLTGIQQTLDTYNVHHDRFDFESEISWEGTS 338

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSK---TTQKCDMDRKQLLFRSTMVGDDVDRP---LL 325
               ++  L +  + +       + K        +   + +  +    G     P   LL
Sbjct: 339 --HALLTTLQKSAFFHPQTQCNAQGKPEGAYLDINSYLEAIGAKMGKGGYQKPYPPFYLL 396

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           + DG+  Y   D+AY   K     D ++  + ++ +   +++     A+   +     + 
Sbjct: 397 RPDGTTLYTFRDVAYSMKKIGE-ADMVLNCICTEQNLPQEKVVLTLQALGITRRAQFHMA 455

Query: 386 CELVRLYRDGMPIKMSKRAG-------------------------------DFITLRHVV 414
            E+V+L +DG   +MS R G                               +  ++ ++ 
Sbjct: 456 YEIVKLMKDGKVKRMSSRRGISFLADDLYKDLKEATKKVMADRKEQKVDLDNQDSVENIT 515

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             V + S+++ +L       ++FD  K  +  + N   ++ Y  AR  SI  + ++   +
Sbjct: 516 HTVANASMKYALLAVHPRNAIEFDIAKAVD-PQGNSAAFILYTGARISSIISKFENGVKE 574

Query: 475 LDFDLFPRNVIPQESEFDTSELQLI-VHLAEYP-RVIENATIAQEP---------YKLAF 523
             F   P ++     + +    +L+  ++  +    +  A     P         + + F
Sbjct: 575 GKFAPAPEHIDWSLIQNEPIAWELLTKYIMSFASETVRAAIPEIPPAPKLPEFGTHIIPF 634

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           + Y+LA  F  ++   +       ++A +  L   R+QL   +   +N+ + +  VE   
Sbjct: 635 FAYNLARTFSSYYGQTQ------ILKAGDPALYP-RVQLCRMILQTLNNAMRLFMVEPLE 687

Query: 584 EM 585
           EM
Sbjct: 688 EM 689



 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)

Query: 39  DCAHGHLSTNAAMILSRPL--GLDP-LTIAELIVARIKIDPDVDSVFI----AGKGFINL 91
           + A    S    M +++       P    A+ +  ++  +   +  FI    A K ++N 
Sbjct: 35  NQAEFDFS----MAVAKYAASKKQPGPKFAQEVAQKV--NEYTNKKFILSAAADKIYVNF 88

Query: 92  YLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            +  +   +I    V S G EYG + + +   V++E  SANP   +H+G+ R  ++G  L
Sbjct: 89  KVDRAQCFQIAYDAVTSMGNEYGSSKLPEPKTVDVEHTSANPNASLHIGNLRSVLIGAHL 148

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202
           A L+ + GY V   Y++ND GAQI   A+       +       D   GY  
Sbjct: 149 ARLLKWVGYNVRELYFVNDLGAQIGLTAVGYARLNGKFPEGYKIDHMIGYIY 200


>gi|218461787|ref|ZP_03501878.1| putative arginyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 184

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 3/146 (2%)

Query: 36  RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95
           R      G L  N  M L++  G +   +    VA    +   D V +AG GF+N  LS 
Sbjct: 28  RSTKPEFGDLQCNEMMRLAKATGKNTHDL-AASVAAAARNDVFDEVSVAGPGFVNFRLSN 86

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
             +    S+++            +  +  I+F   N    +HVGH R  V+G++L  +++
Sbjct: 87  ETIAAEASAMLGDPALGA--EKQRPIRTVIDFGGPNVAKALHVGHLRSFVIGESLRRILS 144

Query: 156 FSGYEVTREYYINDAGAQINTLALSV 181
             G++V  + ++ D G Q+  L    
Sbjct: 145 EIGHDVISDIHLGDWGLQMGKLLYGA 170


>gi|167957304|ref|ZP_02544378.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 237

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 4/182 (2%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
           +   +S++ + + +   ++     I D + +  P          + A  LS+ L   P  
Sbjct: 3   YTKITSKITSDINDAIMRLYPNTNIPD-VTVTVPTQLDKADFVCDVAFRLSKILHTAPYV 61

Query: 64  IAELIVARIKIDPDVDS---VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           I E I   +      D    +  A  GFIN++L+   L KIL  I  +   YGRN I  G
Sbjct: 62  IGESIAKEVNSTQLQDGDYTLEAARPGFINVHLTDVSLSKILIHINDTNQNYGRNDILAG 121

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  IE  S NP   MH+GH R  ++G  +A++ A+ G  V R+   N+ G  I      
Sbjct: 122 QRWVIEHTSPNPNKAMHIGHLRNNLIGMAVANIAAYCGASVVRDCIDNNRGIAIARAMWG 181

Query: 181 VF 182
             
Sbjct: 182 FL 183


>gi|149002906|ref|ZP_01827817.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758909|gb|EDK65904.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 167

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 11/158 (6%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELASIIDSLDQEAILK-------LLETPKNSEMGDIAF-PAFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119
           P  IA  +  ++      + V   G  ++N +L  S +  ++L ++      Y    IGK
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEHYADQNIGK 110

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
              V I+  S N   P  +GH R  V+GD+L+ +   S
Sbjct: 111 QENVVIDMSSPNIAKPFSIGHLRSTVIGDSLSHIFQKS 148


>gi|213583273|ref|ZP_03365099.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 255

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 40/263 (15%)

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E     +VK  S     + +   L  + +  +       + R + +  RD +   +    
Sbjct: 1   ERARNYVVKLQSGDTYFREMWRKLVDITMTQNQI----TYDRLNVTLTRDDVMGESLYNP 56

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +  GI+   K+K     + +   ++F        GD +   + K DG Y Y   D+A  K
Sbjct: 57  MLPGIVADLKAKGLA-VESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAK 115

Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKM 400
            +YE    D ++Y + S    ++ +   +          + +      + L +DG P K 
Sbjct: 116 YRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFK- 174

Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433
             R G  + L  ++DE                           VG  +V++  L +  + 
Sbjct: 175 -TRTGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTT 233

Query: 434 LLDFDFCKVKEQSKENPVFYVQY 456
              FD+  +    + N   Y+QY
Sbjct: 234 DYIFDWDNML-AFEGNTAPYMQY 255


>gi|551762|gb|AAA72384.1| arginyl-tRNA synthetase [Buchnera aphidicola]
          Length = 158

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 9/167 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M L     + +K  +++   KI +   I    VI   +    GH   N  + ++    L 
Sbjct: 1   MNL----KNTIKKDIQDALIKIAI---INCDPVITLNKKTKIGHYQLNNLIKIANISNLK 53

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  +A  I+  IK       +  +  GFIN  ++P ++ + L  I +S            
Sbjct: 54  PFELANRIILNIKKKYMYKEITFSQPGFINFLINPYWISEQLEKIFLSPRLG--INHVNA 111

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
             + I++ S N    MH+GH R  ++GD +A ++ F G+ V R  +I
Sbjct: 112 QNIVIDYSSPNIAKEMHIGHLRSTIIGDVMARILDFLGHNVIRANHI 158


>gi|218673265|ref|ZP_03522934.1| arginyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 106

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/106 (43%), Positives = 75/106 (70%), Gaps = 1/106 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1   MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI 105
           +P  +A++I+A++K D DV  V +AG GFIN+ L+  Y +++L+S+
Sbjct: 61  NPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASM 106


>gi|320100813|ref|YP_004176405.1| arginine--tRNA ligase [Desulfurococcus mucosus DSM 2162]
 gi|319753165|gb|ADV64923.1| Arginine--tRNA ligase [Desulfurococcus mucosus DSM 2162]
          Length = 754

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 84/422 (19%), Positives = 155/422 (36%), Gaps = 64/422 (15%)

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
            +    E+AD         PE + L  +++ S + ++K   + L  +N+  D F  E   
Sbjct: 353 YEAAEDEIADIMRRAEGGDPETRRL--LREVSGE-VLKGFLETLSKINVSFDGFDYESSD 409

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
              + S  R ++D +   GY                 D +  + LF     G  +   + 
Sbjct: 410 EVLELS--RKVVDRVIESGYARVVDGAVEVDLNKAGEDHEYVKNLFHPDQPGRFI---IR 464

Query: 326 KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQIN 382
           +SDG+  Y   D+AY   K+ R   + +  V+  + S   K+L+AV   +    +   + 
Sbjct: 465 RSDGTTLYVTRDIAYTLMKFTRHRAEKVYNVIAVEQSRAQKQLKAVLYLLGYRREADNLV 524

Query: 383 VLLCELVRLYRDGMPIKMSKRAG---------------------------------DFIT 409
               E+V L      ++MS R G                                 D++ 
Sbjct: 525 HFSYEMVHL----KGMRMSGRRGIYYTVDELLMDMENSIIGKHLEETGGFKREATGDYME 580

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR V   +  ++ R ++L  +  ++L FD  ++        V    Y   R +SI R+  
Sbjct: 581 LRSVAGILAVNNTRALLLSVEPGKVLSFDPGRIGVFEHGITVT---YGLVRAQSILRRLW 637

Query: 470 DIFPDLDFDLFP-------RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            + P  D  +          ++  +E  F+  E QL+  L  YP V+  A     P +L 
Sbjct: 638 GVEPLDDASIVKTRGLDTLSSLKQEELGFNVEEKQLLEALVGYPMVLREAYEYMRPDRLL 697

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y   L+  F+  +   R       +   +     +R+ L  AV  +++   +I+G   P
Sbjct: 698 EYASGLSLAFNRMYEKHR------VINEPDPVRKNIRVLLTIAVLLVLSDLADIMGFHKP 751

Query: 583 NE 584
             
Sbjct: 752 RR 753



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 123/320 (38%), Gaps = 34/320 (10%)

Query: 12  KNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT-- 63
           +  LK +     +++ +++      +I +    D   G      A+     L   P    
Sbjct: 10  RGLLKALRDVTGIDESLIEGYIRDGKIRVAPTPDPRMGDYG--VALHA--VLKNYPREKW 65

Query: 64  --IAELIVARIKIDPDVD-----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-N 115
             I E I  ++      +     ++FI   G++N+ +  S + K     +++G       
Sbjct: 66  GEIGESIAGKLVEYSAAECRVKRALFI--NGYVNVEVDYSSIFKSFMESLLTGKLLEDLR 123

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
            IG G  V +E  SANP  P+H+G  R +V+GDT + L+ + G+ V+R +Y+ND G Q+ 
Sbjct: 124 SIGTGRSVVVEHTSANPVHPLHIGSGRNSVIGDTYSRLLKYLGFNVSRLFYVNDLGRQVA 183

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIV 233
            LA  V     Q +        + +Y  VY         DK + EL     E  + +  +
Sbjct: 184 VLAYGVRKLRSQGVTPRPGMKIDHWYGVVYALTNILIEEDKLAHELDGLSRELARLVEEL 243

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++ S + +M      L+          S     RG  S   D +  L     +Y+ I   
Sbjct: 244 EEASRRLIMDKGVTGLERF-------HSRIASIRGMLSLKHDTVKLLRE---LYKEIKGL 293

Query: 294 PKSKTTQKCDMDRKQLLFRS 313
             +       +   +   R 
Sbjct: 294 ETAGGDAAAYLSEYRGRLRE 313


>gi|226324686|ref|ZP_03800204.1| hypothetical protein COPCOM_02472 [Coprococcus comes ATCC 27758]
 gi|225207134|gb|EEG89488.1| hypothetical protein COPCOM_02472 [Coprococcus comes ATCC 27758]
          Length = 178

 Score =  126 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 4   FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63
                  +   +++       EK++    +  RP  C       N AM  ++     P+ 
Sbjct: 11  MKKILDLITEEMEQAFADAGYEKELARVTLSNRPDLCE---YQCNGAMAGAKKYHKAPIM 67

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IAE +VA+I  +  +        GFINL  +P+ +   L+ +     + G   +     +
Sbjct: 68  IAEEVVAKIPENGYISGAEAVKPGFINLKTNPAAVADYLNQMEAD-EKLGVEEVENPKTI 126

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            I++   N   P+HVGH R A++G+++  +
Sbjct: 127 VIDYGGPNVAKPLHVGHLRSAIIGESVKRI 156


>gi|315304822|ref|ZP_07874977.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313626812|gb|EFR95790.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 109

 Score =  126 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 16/125 (12%)

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            RS   Q  D+  D D  L              +E  L+  L E+  V+  A + + P++
Sbjct: 1   MRSGKEQNLDVSKDADMSLLQT----------EAEYDLLKVLGEFADVVAEAAVKRAPHR 50

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YL DLAS FH  ++        + +  +N ++T  RL L+      + +GL ++GV 
Sbjct: 51  IVRYLNDLASAFHRFYNSN------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVS 104

Query: 581 SPNEM 585
           +P +M
Sbjct: 105 APEKM 109


>gi|289606518|emb|CBI61158.1| unnamed protein product [Sordaria macrospora]
          Length = 123

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M L+  F + L+  L  +  +  +   +  R I +E PRD +HG LSTNAAM+L++P   
Sbjct: 1   MTLYPRFFAHLERALDTLVARGDLPAGLERRAITVEPPRDTSHGDLSTNAAMVLAKPAKT 60

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
           +P  +AEL+VA +   P+V +  +AG GFINL L+ +  R  L++I  +G +YGR+  
Sbjct: 61  NPRALAELLVAELAGLPEVAAASVAGPGFINLTLTDATWRGELTAIAEAGDDYGRSQA 118


>gi|297520008|ref|ZP_06938394.1| arginyl-tRNA synthetase [Escherichia coli OP50]
          Length = 95

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +  E QL   L ++   +        P+ +  YLYDLA +F G + H         + A 
Sbjct: 8   EDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHC------PILSAE 61

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           N ++   RL+L    A  +  GL+ +G+E+   M
Sbjct: 62  NEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 95


>gi|330882951|gb|EGH17100.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 99

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             E +L   LA++   + N      P+ L  YLYDLA +F   + +         + A N
Sbjct: 13  PQEQELAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENC------PILGAEN 66

Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                 RL+L       +  GL+++G+E+   M
Sbjct: 67  PDQQQSRLRLAALTGRTLKQGLDLLGLETLERM 99


>gi|315645721|ref|ZP_07898845.1| hypothetical protein PVOR_09595 [Paenibacillus vortex V453]
 gi|315279199|gb|EFU42509.1| hypothetical protein PVOR_09595 [Paenibacillus vortex V453]
          Length = 253

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 94/267 (35%), Gaps = 48/267 (17%)

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN--VLLCELVRLY------------RDGMP 397
           +I V+          ++     +   +  +N   +   +V L                  
Sbjct: 2   VINVIDYRQQYPQLMVKQALEGLGFNEEALNLRHVSYGVVSLSPSAAADLGIDTSDGKAS 61

Query: 398 IKMSKRAGDFITLRHVVDEVG-------------------SDSVRFMMLWRKNSELLDFD 438
             MS R G  I +  ++ +V                    + S+R+ +L       + FD
Sbjct: 62  YAMSGRQGIGIKITELIQQVANVIEETRSDKNGLSSHAIAAASIRYYLLRFALQTEVVFD 121

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +  E S  N   Y+ Y+YAR  S+  +A+D            ++     + + +E  L
Sbjct: 122 LKQATEIS-GNTGVYLLYSYARALSVLNKAQDAGV-------LSSMPAHFPDMEKAEHAL 173

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
           + H++ +   +  A     P  +  + Y+L S+F+  +S          ++A    +   
Sbjct: 174 LRHISTWHDTLYAAGRELSPSAICNFAYELCSLFNNFYSAC------PILKAE-ADVQRF 226

Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585
           R+ L       +   L ++G+ +P+ M
Sbjct: 227 RIWLTSLFKDTLGEALEVLGLPTPSRM 253


>gi|290559071|gb|EFD92444.1| arginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 484

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 89/506 (17%), Positives = 168/506 (33%), Gaps = 91/506 (17%)

Query: 21  KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80
           K+K  K +L+     +P       +S  +    +   G  P   AE +  RI     + S
Sbjct: 2   KLKDIKSLLNLPEWSKPVYSDFSDISF-SCFDEAIKEGKKPKEFAEDLSKRI-SSEYIKS 59

Query: 81  VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
           V  A  G+IN+ +  S L       +    +     I  G  + +E  S NP   +H+GH
Sbjct: 60  VE-AMNGYINISMDFSSLNTHTG-FLNGENDNSTENIFSGKNIRLEHTSVNPNKGLHIGH 117

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL--PE 198
            R + +G+ +     +S   V    +I D GAQ+  + +   +  ++   +   DL   +
Sbjct: 118 MRNSYIGEFMRRCFLYSSSNVITSNFIEDTGAQVADIIVGFKYLGKKIDTDIKFDLYCSK 177

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            Y     L      L +K    LL+     E+ L I++   V  ++      L    I++
Sbjct: 178 IYKEVNQLYESDSTLLEKRRKVLLDIENKNEETLEILEKI-VDKVLSAQLVTLSGERIKY 236

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+   E   +      ++  +D L  +   +       K                     
Sbjct: 237 DLLDLER--YILGEGIVKKALDKLLEEKIAFISESDKNKGCIVTLI-------------- 280

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK------------YERGFD-------------- 350
            D  +  L +SDG+  Y A DLAY   K            + + +D              
Sbjct: 281 -DGKEVTLTRSDGTALYIAKDLAYAMIKHGILHENIKYKPFGQNYDGSEILISNKDGKES 339

Query: 351 --NMIYV----MGSDHSGYVKRLEAVAAAV---------SEKKAQINVLLCELVRLYRDG 395
               I +      S  +     ++++             S +   I+     ++ +  + 
Sbjct: 340 VLKQIDMSFTLTDSAQNAEQAAVKSIIEKFIGTNSYNHYSYEPVAISNNTASIMGIKTED 399

Query: 396 MPIKMSKRAGDFITLRHVVDE-----------------------VGSDSVRFMMLWRKNS 432
             I+MS R G  +    ++                         V S  +R+ +L    S
Sbjct: 400 KFIRMSGRKGITVEFDDLITAVKKRIIEEGEKSGKDVNKEDALKVASSVIRYYILKFSPS 459

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAY 458
           +++ FD         +    Y+ Y+Y
Sbjct: 460 KMVVFDINDATSLKGDR-GLYINYSY 484


>gi|239946914|ref|ZP_04698667.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921190|gb|EER21214.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 126

 Score =  123 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R  SI  +A+++ P+  ++ F  +           E+++I  LA + + +E +T   EP
Sbjct: 1   MRTISILSKARELMPE-SYNSFEASKYDLSLLSSEEEIEIIKLLAAWTKTLEASTKYFEP 59

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           +++AFYL +LAS FH  W+ G+EN   RFV  +N++LT+ RL L  A+  +I SGL +IG
Sbjct: 60  HRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIG 119

Query: 579 VESPNEM 585
           VE  N+M
Sbjct: 120 VEPMNKM 126


>gi|307327898|ref|ZP_07607080.1| Arginine--tRNA ligase [Streptomyces violaceusniger Tu 4113]
 gi|306886416|gb|EFN17420.1| Arginine--tRNA ligase [Streptomyces violaceusniger Tu 4113]
          Length = 341

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 3/176 (1%)

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           ++ R ++  +G D+ R+ +L     +L D D   +  Q ++N +F VQYA+AR R++ R 
Sbjct: 167 VSGRDLLTRLGPDAARWALLRPAGHDLPDLDPAHLLSQREDNALFRVQYAHARTRALMRN 226

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A       +      +          +E  L+  LA++PR IE A   + P +LA  L  
Sbjct: 227 ASQFGIVPEPQSDSGSDSEPGMYGHPAEAALLALLADHPRTIEAAARHRAPDRLARQLVA 286

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +A  F          P L   +     +   RL L  A  +++  GL+++G+ +P 
Sbjct: 287 VADGFFRF---HDACPALPAGECKPSAVHRSRLALADAAGAVLAGGLHLLGISAPE 339



 Score = 75.3 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT- 63
           A  S  + + ++      ++   + +R+ +  P     G  +TN A++L+   G      
Sbjct: 4   AQLSRTVLHTVRRAVEDDELCVAVPERVKVRIPPRPGCGDYATNVALLLASGSGDGGDGD 63

Query: 64  ---IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
              IAE++  R+ +DP +  V IAG GF+N+ L  +   +++ +++  G+ YG      G
Sbjct: 64  ALGIAEVLRRRLVLDPGIARVDIAGPGFLNITLEGTSHAQLVRAVLSQGLRYGHGDALAG 123


>gi|284042472|ref|YP_003392812.1| Arginyl-tRNA synthetase-like protein [Conexibacter woesei DSM
           14684]
 gi|283946693|gb|ADB49437.1| Arginyl-tRNA synthetase-like protein [Conexibacter woesei DSM
           14684]
          Length = 580

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 34/374 (9%)

Query: 62  LTIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN--LI 117
             +A+  V  ++ DP  D DSV    + F+  +         L + +  G   G     +
Sbjct: 49  RALADAAVEVLRADPALDADSVTQEQQRFLMRF--TDARIAELGAGLEEGRLPGMETRDL 106

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             G +  ++F   N T  +H+GH R   +G  ++S +  +G  V R+ +I DAG  +   
Sbjct: 107 RAGERAIVDFCDPNATKALHIGHLRNIALGQAISSALRAAGAHVERQSHIGDAGRSMGE- 165

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           AL+ + RY +     ++ +    + G       +E +        + P  + L    D +
Sbjct: 166 ALAGYRRYAEPGTPAEAGVKSDQFVGDLYARYAREESPIADVADEDAPVARDLDERDDLA 225

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK-- 295
            Q +  I +DD  A+ +   +              +    + LAR G  +E IL      
Sbjct: 226 QQLLTGIEQDDADAVALWRTVRGW----------AVAGQNETLARLGVHFERILYDSDRT 275

Query: 296 SKTTQKCDMDRKQLLF----RSTM---VGDDV--DRPLLKSDGSYTYFAADLAYFKCKY- 345
           ++T +   +  ++ +F    R T+    GDD     PL ++DG  T+    +A ++    
Sbjct: 276 ARTAEVARLGIERGVFVREERGTVAYLTGDDSYPVMPLTRADGFPTHHLRVVAMWRDMMI 335

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKR 403
           +     +I++ G +   +V+ +E +   +      +    +L  +V    DG    +S  
Sbjct: 336 DEEGSALIHLSGDEWKAHVQHVEELLGRLEPALPVLPSQHVLHGMVSSEVDGE---LSSS 392

Query: 404 AGDFITLRHVVDEV 417
            G    +  ++DE+
Sbjct: 393 KGTAQLIDELLDEL 406


>gi|218883811|ref|YP_002428193.1| Arginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765427|gb|ACL10826.1| Arginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 758

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 80/409 (19%), Positives = 152/409 (37%), Gaps = 67/409 (16%)

Query: 210 GKELADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           G E A++  SE++   E    +   +++D S   +   I + L+ +NI  D F  E    
Sbjct: 356 GYEDAEREISEIMKRAEGGDPEVRRLLRDISGNVLRGFI-ETLEKINIGFDGFDYESSDE 414

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
             + S    I+D + +  Y                 +    + LF     G  +   + +
Sbjct: 415 VLELSK--GIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRSLFHPDQPGRFI---IRR 469

Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383
            DG+  Y   D+AY   K++R   + +  V+  + +   K+L+A+   +  K     +  
Sbjct: 470 RDGTTLYVTRDIAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKREADNLVH 529

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVV----------------------------- 414
              E+V L      ++MS R G + T+  ++                             
Sbjct: 530 FSYEMVHL----KNMRMSGRRGIYYTMDELLMDMEDSIVARGIEGSSSFKQEAEGKYIDL 585

Query: 415 ----DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                 +  ++VR ++L  +  ++L FD  K+        V    Y   R +SI R+   
Sbjct: 586 METARMLAVNNVRALLLSVEPGKVLSFDPSKIGSFEHGITVT---YGLVRAQSILRKLWG 642

Query: 471 IFPDLDFDLFPR-------NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           + P ++ +           ++  +  EF+T E Q++  L  YPRV+  A     P KL  
Sbjct: 643 LEPLVEINAVRSRSIEIYTSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKLLE 702

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLVHAVASIIN 571
           Y  +L+  F+  +   R       V      +    R+ L  AV  ++ 
Sbjct: 703 YAVELSLFFNRMYEKHR-------VIGEPDAVKKAVRVLLTVAVFLVLA 744



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 120/309 (38%), Gaps = 12/309 (3%)

Query: 8   SSRLKNYLKEIDCKIKVEKKILDRIVIE------RPRDCAHGHLSTNAAMILSRPLGLDP 61
              L+  ++ +     +E++++++ +IE         D   G       ++         
Sbjct: 10  ECILRGLVRAVKDSTGIEEEVVEKYIIEGKIRIAPTPDPRMGDYGVALHIVFKNYPRDKW 69

Query: 62  LTIAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLI 117
             I  LI  ++     +       +   G+IN+ +  S + K     ++SG        I
Sbjct: 70  EEIGSLIARKLLEYSAEECRLRNTVYVNGYINVEVDYSTIFKSFMESLLSGRLLSELRSI 129

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
           G G  + +E  SANP  P+H+G  R +V+GDT A L+ + G+ V R +Y+ND G Q+  L
Sbjct: 130 GFGKNIVVEHTSANPVHPLHIGSGRNSVIGDTYARLLKYLGFNVVRLFYVNDLGRQVAVL 189

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A  V     Q +        + +Y  VY         D+ + EL     E    + +  +
Sbjct: 190 AYGVSKLRSQGIVPRPGLKIDHWYGIVYALTNIFIEEDRVAHELGMLSLELNKLLEELEN 249

Query: 238 VQAMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               +    D   LK L+ +  I  S+          + ++I  L  Q   +E +     
Sbjct: 250 TLQGLAGEADSPALKKLHSKIHILASKTRLKHDTVKILGELIKELRHQSESWEKLPDILN 309

Query: 296 SKTTQKCDM 304
             + +  ++
Sbjct: 310 EYSRRVGEL 318


>gi|195561378|ref|XP_002077469.1| GD17808 [Drosophila simulans]
 gi|194202583|gb|EDX16159.1| GD17808 [Drosophila simulans]
          Length = 137

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 59/141 (41%), Gaps = 6/141 (4%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + + N   Y+ Y Y R  SI R + + F +L   L   N++         E +L   L +
Sbjct: 3   EDRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIV----LAHEKEWKLAKTLLK 58

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              ++   +     + L  + +++ +VF   +       + +  Q +   +   R+ +  
Sbjct: 59  LHDILIKCSKELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNK--QGDIIAVNHSRILMCE 116

Query: 565 AVASIINSGLNIIGVESPNEM 585
           A A+++     I+G++  ++M
Sbjct: 117 ATAAVLRQCFYILGLKPVSKM 137


>gi|332267363|ref|XP_003282651.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Nomascus
           leucogenys]
          Length = 257

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 33/275 (12%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---YQQALYNN 192
           MHVGH R  ++G++++ L  F+GY+V R   ++    +  +  L +F     Y   LY  
Sbjct: 1   MHVGHLRSTIIGESISRLFEFAGYDVLR---LSGTKDKTPSFILHIFLEDPLYATGLYPG 57

Query: 193 DSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                E          V   + D    Y      F  E+         V  +     D  
Sbjct: 58  ----RERSSKETDYLTVSPPIGDLQLFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDIT 113

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY-----EGILPPPKSKTTQKCD 303
           KA  +  D+        R + + I D +D +L  +G  +       I+   + +   + D
Sbjct: 114 KAWKLICDV-------SRQEFNKIYDALDISLIERGESFYQDRMYDIVKEFEDRGFVQLD 166

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSG 362
            D ++++F   + G  +   ++KSDG YTY  +DLA  K + +E   D +IYV+ +  S 
Sbjct: 167 -DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSV 222

Query: 363 YVKRLEAVAAAVSEKKAQINVLL--CELVRLYRDG 395
           + + + A A  +     ++  +      V L  D 
Sbjct: 223 HFQAIFAAAQMIGWYDPKVTPVFLAGFGVVLGEDK 257


>gi|213584201|ref|ZP_03366027.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 109

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 14/123 (11%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L ++   
Sbjct: 1   NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQFEET 52

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +        P+ +  YLYD+A +F G + H         + A N  +   RL+L    A 
Sbjct: 53  LTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSRLKLAQLTAK 106

Query: 569 IIN 571
            + 
Sbjct: 107 TLK 109


>gi|225352870|ref|ZP_03743893.1| hypothetical protein BIFPSEUDO_04506 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156297|gb|EEG69866.1| hypothetical protein BIFPSEUDO_04506 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 124

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 20/138 (14%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +L  +G +YE                      F ST  GDD DR ++KSDG+Y YFAAD+
Sbjct: 2   DLRERGDIYE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADI 45

Query: 339 AYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394
           AY++ K  R     D  IY++G+DH GY+ R+ A+ AA  ++  + + +L+ +LV + +D
Sbjct: 46  AYYRNKRHRDNDPADIAIYMLGADHHGYIGRMMAMCAAFGDEPGENMQILIGQLVNVLKD 105

Query: 395 GMPIKMSKRAGDFITLRH 412
           G  ++MSKRAG+ +T+  
Sbjct: 106 GKAVRMSKRAGNVVTIDD 123


>gi|189193731|ref|XP_001933204.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978768|gb|EDU45394.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 474

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 77/421 (18%), Positives = 134/421 (31%), Gaps = 106/421 (25%)

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
           H R  V+G  +  L A  G++V R  Y+ D G  I  L +       +  Y+ D   P G
Sbjct: 93  HLRSTVIGAFIGRLYASMGWDVARVNYLGDWGKPIALLYVGWAKYGSEEAYDTD---PIG 149

Query: 200 YYPGVYL-------------KHVGKELADKYSSELLNFPE-------EKWLPIVK----- 234
           +   VY              K    E+A +   +     E        +     K     
Sbjct: 150 HLLEVYRKIEEDFKPEQAASKQARDEMAKEGGDKGEAQVEIESRGIFAERNEAFKKLEEG 209

Query: 235 DYSVQAMMKIIRDD--------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           D  + A  K +RD            L+I+ D +  E       P  + ++   L  +   
Sbjct: 210 DEGLVAFWKRVRDTNIANYAKFYDRLDIRFDEYSGESQIS---PDTMVEVEQMLKNKSL- 265

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-GSYTYFAADLAYFKCKY 345
                           +      +     +G      +++   GS TY   DLA    + 
Sbjct: 266 ---------------SEESGGAWIVHMQNIGAKAGTAIIRDRSGSSTYLLRDLAAALERS 310

Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            R  FD MIYV+ SD+S +  +L  +  A+  K       L + ++  +     K+    
Sbjct: 311 RRYSFDKMIYVVASDNSVHFTQLTMILEALDMKD------LADRLQHVKFNEASKIVTAL 364

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G   T + ++D+                 L + D  K+                      
Sbjct: 365 GRGYTPQGILDKCEEAM----------EGLQEADNDKLASM------------------- 395

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                D+  + D+          E   +  +  L+  L +YP V++    + EP  +  Y
Sbjct: 396 ----GDLLSNEDY----------EQLVEEEQHNLLRILMQYPEVMDTTFHSLEPSSIVAY 441

Query: 525 L 525
           L
Sbjct: 442 L 442


>gi|320008558|gb|ADW03408.1| DALR anticodon binding domain protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 370

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T   +++ +G+D+ R+ +L     +  D     +  Q + NP+F V+YA++R R++ R+A
Sbjct: 210 TAAELLERLGADATRWGLLRPAGHDRADLG-EALLVQGEANPLFLVRYAHSRARALSREA 268

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
           + +     +D             D     L   LA++P V+ +A   Q P +LA +L  +
Sbjct: 269 ERLGFTAGYD------------QDVDAPSLHAALADHPGVLASAARHQAPDRLARHLETV 316

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           A   H  +      P L             RL L  A  +++  GL+++G+ +P 
Sbjct: 317 A---HAFFDLHDTCPPLPVGDEKPSAAHRSRLALAEAAGTVLAGGLSLLGISAPE 368



 Score =   99 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 13/159 (8%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+ P  L    +
Sbjct: 21  ADLSRTVLHAVRRAVDEDALRAPVPARVRVERTRPGGSGDYACAVALQLAGPAALPAREV 80

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSY---LRKILSSIVVSGIEYGRNLIGKGT 121
           A L+  R+   P +  V I G GF+N  L  S        +  ++  G+ YG      G 
Sbjct: 81  AALLRDRVAGTPGIGRVEITGPGFLNFTLDASAGATGAACVRQVLEQGLRYGWGAECAGQ 140

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              +           H    R AVV  T+  L+   G  
Sbjct: 141 LHQLH----------HRREVRAAVVAGTVMKLLRAQGAR 169


>gi|311244159|ref|XP_003121335.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 225

 Score =  116 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 18/179 (10%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMIL------SRPLGLDPLTIAELIVARIKIDPDVDS 80
           K +  + I   R         +   +L      SRP   D    A  +  ++K D  V  
Sbjct: 26  KSISAVPI--SRKEEVADFQLSVDSLLENNNDHSRP---DIQIQAMRLAEKLKCDTVVSE 80

Query: 81  VFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGP 135
           +   G+G +N  ++   L K  L  ++  G +YG ++ +  G    K+ +EF S N    
Sbjct: 81  IS-TGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKK 139

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNND 193
            HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q   L        Y++ L +N 
Sbjct: 140 FHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNP 198


>gi|255016789|ref|ZP_05288915.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 108

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 1   MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           M +  +   +L  ++K+ +   + +E+  +  I++E P+D  HG  STN AM L+R    
Sbjct: 1   MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60

Query: 60  DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILS 103
            P  IAE IV  +K D   +  V IAG GFIN YL  +YL  ++ 
Sbjct: 61  APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVP 105


>gi|170590232|ref|XP_001899876.1| arginyl-tRNA synthetase family protein [Brugia malayi]
 gi|158592508|gb|EDP31106.1| arginyl-tRNA synthetase family protein [Brugia malayi]
          Length = 377

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 127/405 (31%), Gaps = 70/405 (17%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L+++ S +++ +  +           + L+     + +++ S N     HVG+ R  V+G
Sbjct: 2   LHVADSSMKRFVYEMWREENLPATLLQKLVKNRKSIVVDYSSPNIAKQFHVGNFRSTVIG 61

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
             + ++   +G +V    YI D G Q   +A               + L + Y     L 
Sbjct: 62  RYIDTINRAAGNKVISLNYIGDWGLQFALIAAHWPVWSTWNTVQKFTFLAKCYVEANKLA 121

Query: 208 HVGKELADKYSSELLNFPEEKWLP------IVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                   K  + L +                   + Q   + +    + +N+  D+   
Sbjct: 122 EHSSSFLQKAYNILASMENSLLTAGTNDHLSFWQNARQLSHEQLHHFYRRMNLSMDVEYF 181

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E DF          +I+ + R+G    G                        T++  +++
Sbjct: 182 ESDF----VVSAHQLINRMLREGQAENGSDGVV-------------------TVICKELN 218

Query: 322 R--PLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
           R   + +S+ +  Y + DLA    + +    D   YV+      +   L+ +  A+    
Sbjct: 219 RSIVIRRSNNTTLYLSRDLASVLLREQLYAADKYFYVVDHAQRQHFTNLKCLLNAIGRND 278

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416
                 + E +     G    +S R G+   +  +++                       
Sbjct: 279 ------IGEKIHHVSFGRVKGLSTRLGEVELVSKILEHGLELAKSFITKSRTMKISQNEI 332

Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
                 +   ++    L R  S    F F K   Q  +N    +Q
Sbjct: 333 PQVAANLSLGTMIVNDLKRARSTNYSFSFDKA-FQMNQNNALLLQ 376


>gi|328479565|gb|EGF48791.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 131

 Score =  113 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 77  DVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
             + V + G G++N YL   S+  ++L +IV SG  +G   +G+G    I+  S N   P
Sbjct: 1   PFEQVKVVG-GYVNFYLDKISFAHEVLKAIVQSGEHFGDAKLGEGNVP-IDMSSPNIAKP 58

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           M +GH R  V+G+ LA+++   GY   +  ++ D G Q   L ++      +A    D  
Sbjct: 59  MSMGHLRSTVIGNALANILQKVGYSPIKINHLGDWGTQFGKLIVAYKKWGSEADVKAD-- 116

Query: 196 LPEGYYPGVYLKH 208
            P       Y+K 
Sbjct: 117 -PIKNLLQYYVKF 128


>gi|255029353|ref|ZP_05301304.1| arginyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 76

 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           E+  V+  A   + P+++  YL DLAS FH  ++        + +  +N ++T  RL L+
Sbjct: 1   EFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVTKARLALI 54

Query: 564 HAVASIINSGLNIIGVESPNEM 585
                 + +GL ++GV +P +M
Sbjct: 55  KTAQITLRNGLTLLGVSAPEKM 76


>gi|149179591|ref|ZP_01858117.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148841572|gb|EDL56009.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 109

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           L A F++++      ++ +  +  +     + +E PRD +HG L+TNAAM+L++    +P
Sbjct: 7   LHAGFAAKIDAVFNALEMEGSLPPETDRSNVTVEPPRDPSHGDLATNAAMVLAKKAKTNP 66

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
             +AE IV  +  +PD+    IAG GFINL LS     + L
Sbjct: 67  RALAEKIVEHLTREPDITEASIAGPGFINLCLSEQAWLREL 107


>gi|1572515|gb|AAC44610.1| arginyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 87

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
           E QL   L ++   +        P+ +  YLYD+A +F G + H         + A N  
Sbjct: 3   EAQLADRLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHC------PILSAENDA 56

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   RL+LV   A  +  GL+  G+E+   M
Sbjct: 57  VRNSRLKLVQLTAKTLKLGLDTSGIETAERM 87


>gi|124783875|gb|ABN14954.1| arginyl-tRNA synthetase [Taenia asiatica]
          Length = 207

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 7/135 (5%)

Query: 17  EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-----GLDPLTIAELIVAR 71
           ++  K    +      V+ R      G    N  + L+R        + P+  A+ I   
Sbjct: 73  DLASKRAFPELGSSSAVMTRSSHPNFGDYQCNNGLSLARKFSADGTKISPVEAAKKICEH 132

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           +     ++ V IAG GFIN+++S  ++ + ++ +V  G         +  K  ++  S N
Sbjct: 133 LVKGLLIEKVDIAGPGFINIFISRCFVEEEVNKLVRLGFSLP--PPQRRLKCIVDMSSPN 190

Query: 132 PTGPMHVGHCRCAVV 146
               MHVGH R  ++
Sbjct: 191 IAKEMHVGHLRSTII 205


>gi|291333572|gb|ADD93266.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 196

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 4/149 (2%)

Query: 39  DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98
           +   G +S       ++ L   P  +A+ +   I     +   F+  K F N+ L   +L
Sbjct: 33  NPIQGDISI-ICFPGAQSLKKSPEEVAKNVSEMISHIKLIKETFVV-KAFCNIVLDWDFL 90

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + +   + +  EYGR  + K   + +E  SAN TGP H+G  R  ++GD+++ L+ + G
Sbjct: 91  FEDIFDEI-NNSEYGR-GVSKPDSILLEHTSANATGPFHMGRARNPIIGDSVSRLLKYYG 148

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQ 187
           YEV+ EYY+ND G Q  T+A  +     +
Sbjct: 149 YEVSTEYYVNDTGRQAATVAYGIKILRAE 177


>gi|302542536|ref|ZP_07294878.1| arginine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302460154|gb|EFL23247.1| arginine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 358

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 41/181 (22%)

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G  +  R ++  +GSD+ R+ +L     +L D D   +  Q + NP+F V+YA+A    
Sbjct: 218 RGAGVGARELLTRLGSDAARWGLLRAAAHDLPDLDPAHLLAQREGNPLFRVRYAHA---- 273

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                          L  R+V   E+E       L+  L ++PR +E+A   + P ++A 
Sbjct: 274 ---------------LAKRSVGDAEAEGADDS-ALLGLLGDFPRTVESAARHRAPDRVAR 317

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +L   A  F          P  R            R +L  A   ++ +GL ++G+ +PN
Sbjct: 318 HLVATADAF---------LPGTR------------RKRLAEATRVVLANGLRLLGISAPN 356

Query: 584 E 584
            
Sbjct: 357 R 357



 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 23/258 (8%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG-LDPLT 63
           A  S  + + ++      ++   + +R+ ++ P     G  +TN A+ L+R  G      
Sbjct: 59  AQLSRTVLHTVRRAVEADELCVDVPERVKVQTPPRPGCGDYATNVALQLARGRGEGAAAR 118

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           IAE++  R+   P + +V IAG GF+N+ L      ++L  ++  G  YG      G  +
Sbjct: 119 IAEVLRRRLVGTPGIVAVDIAGPGFLNITLDARSHEQLLGVVLEQGDGYGLGDGLAGVCL 178

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
                   P   +     R A+V   +  L+   G  V     +   G  I+     V  
Sbjct: 179 RFA-----PADEV-----RAALVLHVVKGLVEGCGGSVD----VGPGGEVISVRGAGVGA 224

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R  + L    SD          L+    +L D   + LL   + +  P+ +     A+ K
Sbjct: 225 R--ELLTRLGSDAARWGL----LRAAAHDLPDLDPAHLL--AQREGNPLFRVRYAHALAK 276

Query: 244 IIRDDLKALNIQHDIFIS 261
               D +A        + 
Sbjct: 277 RSVGDAEAEGADDSALLG 294


>gi|238495967|ref|XP_002379219.1| arginyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220694099|gb|EED50443.1| arginyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 333

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 107/298 (35%), Gaps = 50/298 (16%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E A KY   +    EE  L + K +   +++K        LNI +D++  E         
Sbjct: 32  ERAIKYFKRMCEGGEEA-LGLWKKFRDLSIIKYQ-ASFARLNIHYDVYAGESQIKNESMK 89

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGS 330
            + ++                   +K  +  ++    +L   T     + +  + K DG+
Sbjct: 90  EVENM-------------------TKEKRVSEVSDGAVLVDLTKYSKKLSKEIVRKKDGT 130

Query: 331 YTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL--- 384
             Y + D+     +  E  +DNMIYV+ S    ++ +L  +   +  K    ++  +   
Sbjct: 131 SNYMSRDIGAVFERDEEYHYDNMIYVIASQQDLHMAQLIKIIELIGRKGLADKLEHVNFG 190

Query: 385 --------------LCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMML 427
                         L +++R  +D M   M      +  +     + D +   +V    +
Sbjct: 191 LVHEMSTRRGTVKFLDDILRDAKDKMQEVMRSNQAKYEQVEDSEKIADILDISAVLVQDM 250

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPR 482
             K +    FD  ++     +    Y+QY++AR  SI R+A    +   D D  L   
Sbjct: 251 ASKRN-DYTFDMDRMTSFEGDK-GPYLQYSHARLCSIIRKADLPSEPLKDADLSLLQE 306


>gi|311244166|ref|XP_003121341.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 275

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 6/115 (5%)

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYG-RNLIGKG-- 120
           A  +  ++K D  V  +   G+G +N  ++   L K  L  ++  G +YG ++ +  G  
Sbjct: 65  AMRLAEKLKCDTVVSEIS-TGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLP 123

Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             K+ +EF S N     HVGH R  ++G+ +A+L    G++VTR  Y+ D G Q 
Sbjct: 124 QKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQF 178


>gi|167461683|ref|ZP_02326772.1| arginine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 155

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 33  VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
           V+E P     G ++       S+ L   P            I  +      AG  +INL+
Sbjct: 24  VLEPPPSGDMGDVAFP-CFHASKLLRKPPAQ--IAAELAAAIHAEGVRAEAAGP-YINLF 79

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            +PS    +L   +++  E+G+  +G+G +V I+  S N   P  +GH R  V+G+ L +
Sbjct: 80  FTPSVYGDLLLQGMMN-PEFGKPDLGQGKRVIIDMSSPNIAKPFGIGHLRSTVIGNALYN 138

Query: 153 LMAFSGYEVTREYYIND 169
           L   +G+E     ++ D
Sbjct: 139 LYKETGFEPVSVNHLGD 155


>gi|297814484|ref|XP_002875125.1| hypothetical protein ARALYDRAFT_904472 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320963|gb|EFH51384.1| hypothetical protein ARALYDRAFT_904472 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 388

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 99/281 (35%), Gaps = 37/281 (13%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG------L 59
           +   +L   L  +  K+ V  +     ++        G    N AM L   +        
Sbjct: 34  NLKRQLAKLLV-VCLKLTVPDEPSFEPLVAASAAGKFGDYQCNNAMGLWSIIKGKGTQFK 92

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119
            P  +   +V  +     V+S  +A  G+IN+ LS  ++ K++         +    +  
Sbjct: 93  GPPAVGLALVKSLPTSEMVESCSVARPGYINVVLSAKWMAKLI---------FPLPTLQN 143

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
              + I                R  ++GD LA ++ +S  EV R  +++D G +   L  
Sbjct: 144 KYMLVI---------------LRSTIIGDMLARMLEYSKVEVLRRNHVDDWGTKFGMLIE 188

Query: 180 SVFWRYQQALYNNDSDLPEG---YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            +F ++       ++D+               + ++  ++    ++    +   P+ +  
Sbjct: 189 YLFEKFPDTDSVIETDVVFDRCFTRHQKKKFDLDEDFKERAQQAVVRLQAQGGDPVYRK- 247

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           +   + +I R +   +  +  + + E   +  D    + +I
Sbjct: 248 AWAKICEISRTEFAKVYQRLRVELEER--YWLDEEKAQWMI 286



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 4/113 (3%)

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-SEKKAQINV-LLCELVRLYRDGMPI 398
                E     MIY   +    ++         +   +K    V  +   + L  DG   
Sbjct: 274 RYWLDEEKAQWMIYNTAAGQEQHLSTFFKKEGWLPGNEKTYPRVNHVGFGLVLGEDGK-- 331

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
           +   RA D + L  +VDE  + S   ++   K+ E    +  +  E      V
Sbjct: 332 RFRTRATDVVRLVDLVDEAKTRSKLALIERGKDKEWTPEELDQTTEAVGYGAV 384


>gi|55859659|emb|CAI10898.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 205

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%)

Query: 43  GHLSTNAAMILSR---PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99
                +   +L +       D    A+ +  +++ D  V  +   G+  +N  ++   L 
Sbjct: 67  ADFQLSVDSLLEKDNDHSRPDIQVQAKRLAEKLRCDTVVSEIS-TGQRTVNFKINRELLT 125

Query: 100 KI-LSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           K  L  ++  G +YG ++ +  G    K+ +EF S N     HVGH R  ++G+ +A+L 
Sbjct: 126 KTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLK 185

Query: 155 AFSGYEVTREYYINDAGAQI 174
              G++V R  Y+ D G Q 
Sbjct: 186 EALGHQVIRINYLGDWGMQF 205


>gi|72012209|ref|XP_781115.1| PREDICTED: similar to Arginyl-tRNA synthetase-like
           [Strongylocentrotus purpuratus]
 gi|115965893|ref|XP_001186335.1| PREDICTED: similar to Arginyl-tRNA synthetase-like
           [Strongylocentrotus purpuratus]
          Length = 185

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 14/180 (7%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +      V + +G  ++    L         FD+ +V   S+ +   ++QY+YAR  SI 
Sbjct: 20  EQENPEQVAEALGVSAIILQDLKGSIISDYKFDWDRVL-TSQGDTGVFLQYSYARLCSIE 78

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                + P    D    N++      +   +QL   ++ Y   +  A    EP  +A YL
Sbjct: 79  E-LNSMPPSSSHDEIDSNLL-----CEPEAVQLAWFISHYDVAVRRAEAEMEPKAVAQYL 132

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
             L  +        R N +L+ V+ +   +   RLQL  +    + +G+ ++G++  ++M
Sbjct: 133 LQLGHLIS------RANNKLK-VKGSPDDVKRARLQLFRSARMTLANGMRLLGMKPLSKM 185


>gi|148726490|emb|CAN88096.1| novel protein similar to vertebrate arginyl-tRNA synthetase-like
           (RARSL, zgc:63702) [Danio rerio]
          Length = 221

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS-----GIEYGRNLIGKGTK 122
           +  +I+ D  V+ V I G+G I+  L+   L + L   + S     G++       +  +
Sbjct: 68  LARQIRTDAVVEEV-IPGRGVIHFRLNKLLLAQKLLDQLRSDPDGFGVKSEILRRLRVGR 126

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +EF S N     H GH R  ++G+ +A+L    G EV R  Y+ D G Q   L  S F
Sbjct: 127 TLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALGNEVIRVNYLGDWGMQFGLLG-SGF 185

Query: 183 WRY 185
            R+
Sbjct: 186 ERF 188


>gi|45269001|gb|AAS55913.1| arginyl-tRNA synthetase [Sus scrofa]
          Length = 82

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +P V++        + L  Y+Y+LA+ F   +       + R       K+ M RL L
Sbjct: 1   LRFPEVLQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQ-TGEVLKVNMWRLLL 59

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
             AVA+++  G +I+G++    M
Sbjct: 60  CKAVAAVMAKGFDILGIKPVQRM 82


>gi|282861109|ref|ZP_06270174.1| DALR anticodon binding domain protein [Streptomyces sp. ACTE]
 gi|282563767|gb|EFB69304.1| DALR anticodon binding domain protein [Streptomyces sp. ACTE]
          Length = 386

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 15/143 (10%)

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +  Q++ NP+F V+YA+AR R++ R A+ +                  E D     L 
Sbjct: 256 DDLLVQTEANPLFLVRYAHARARALTRGAEQLGF------------TGAYEQDVDAPALH 303

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
             LA++P V+ +A     P +LA +L  +A  F   +        L             R
Sbjct: 304 AALADHPGVLASAARHHAPDRLARHLESVARAF---FDLHDTAGPLPVGDEKPSAAHRSR 360

Query: 560 LQLVHAVASIINSGLNIIGVESP 582
           L L  A  +++  GL+++G+ +P
Sbjct: 361 LALAEAAGTVLAGGLSLLGISAP 383



 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 14/158 (8%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+ P  L    +
Sbjct: 32  ADLSRTVLHAVRRAVDEDALRAPVPARVRVERTRPGGSGDYACAVALQLAGPAALPAREV 91

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYL----SPSYLRKILSSIVVSGIEYGRNLIGKG 120
           A ++  R+   P V  V I G GF+N  L           ++ +++  G +YG   +  G
Sbjct: 92  ARILRDRVAAAPGVGHVEITGPGFLNFTLDAPADADARASVVRAVLDRGPQYGHVTVDNG 151

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           T   +           H    R AV+  T+  L+   G
Sbjct: 152 TLHRLH----------HPPEVRAAVLARTVGHLLRAQG 179


>gi|170052268|ref|XP_001862145.1| arginyl-tRNA synthetase 2 [Culex quinquefasciatus]
 gi|167873170|gb|EDS36553.1| arginyl-tRNA synthetase 2 [Culex quinquefasciatus]
          Length = 228

 Score =  101 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 2/147 (1%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            R      V+  +   R       K  +EF S N   P H GH R  ++G+ LA+L    
Sbjct: 82  YRNRFVHEVLGNLSLERKSPANPPKTLVEFSSPNIAKPFHAGHLRSTIIGNFLANLYDHL 141

Query: 158 GYEVTREYYINDAGAQINTLALSVFWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           G++V R  Y+ D G Q   L L V  +   ++ +  N  +     Y   Y K        
Sbjct: 142 GHDVVRLNYLGDWGTQFGYLKLGVDLKGLSREDIRRNPIESLYEAYVYAYGKAEDSPELQ 201

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMM 242
             + ++ +  E      +  + ++   
Sbjct: 202 DRARQIFSELENGTFSELDTWKMEERW 228


>gi|294879509|ref|XP_002768707.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239871468|gb|EER01425.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 189

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 65/184 (35%), Gaps = 40/184 (21%)

Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
           ++KSDG Y Y + D+     +  +   D ++Y+       + K+L  VA           
Sbjct: 3   VVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPPQT 62

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416
            L      +       K   R+G  + L  ++DE                          
Sbjct: 63  KLEYLGFGVVCGDDGKKFKTRSGATVKLTDLLDEAEDRARKELESRLNAGEGEAAGRSTG 122

Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
                       +G  SVR+  L +  +    F+F K+ +  K N   ++ YAYAR  SI
Sbjct: 123 LTEEEFDRASKIIGVASVRYFDLRQNRTTNYIFNFDKMLD-PKGNTAVFLLYAYARICSI 181

Query: 465 FRQA 468
            R+A
Sbjct: 182 LRKA 185


>gi|311896743|dbj|BAJ29151.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 498

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 83/426 (19%), Positives = 143/426 (33%), Gaps = 51/426 (11%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
               +   +G +V +E  S NP  PMH+G  R  ++G +LA L+  +G EV   Y++ND 
Sbjct: 67  WKEWSTHLRGRRVIVEHTSINPVHPMHLGALRSTLIGGSLARLLRSAGAEVRVHYFVNDH 126

Query: 171 GAQINTLALS-VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-FPEEK 228
           G Q+  L       R +        D   G    +    +G+  AD       + + +  
Sbjct: 127 GRQVVLLDWIMARTRTRAIPPGMRFDTAAGVLYALVNMVLGERAADIERLTAAHPWLDRA 186

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
             P ++D            D +   +   +     D    D   +   +D+  R     E
Sbjct: 187 VPPELRDPVALRARLADPTDPRPGFVDRMV-----DLAVADMGLVHAEVDHFER-----E 236

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD--RPLLKSDGSYTYFAADLAYFKCKYE 346
             +  P      +   +   +    T      D   P+ +++GS  YF  D+A    + +
Sbjct: 237 SAVTGPLDSLLHELLAEHPAVAVNGTWCLRRPDGLVPVARANGSSLYFLRDVANSLAR-D 295

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              D M++V+G D +   + L  V AA       +                 K S R   
Sbjct: 296 PAADLMLHVIGDDQTLLQRALRDVLAARGRTSEHVAFG-------TIHDRGRKFSSRQNR 348

Query: 407 FITLRHV----VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            IT+  V     D + S ++  MML R           +  +        +         
Sbjct: 349 LITVAEVDREDADRLASTALE-MMLRRPR---------RALDVGALTGRPH--------- 389

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
              R+  +    L+       V P+      +  +L   L         A   + P+ LA
Sbjct: 390 ---RRVAEA---LELASHGTGVGPEAGLPHPAARELATALLRSLGAAHGALHLRSPHPLA 443

Query: 523 FYLYDL 528
            YL DL
Sbjct: 444 RYLVDL 449


>gi|239982303|ref|ZP_04704827.1| arginyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291454148|ref|ZP_06593538.1| arginyl tRNA synthetase [Streptomyces albus J1074]
 gi|291357097|gb|EFE83999.1| arginyl tRNA synthetase [Streptomyces albus J1074]
          Length = 324

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++      ++   + +R+V+ERP     G  ++N A+ L+R  G  P  +
Sbjct: 4   ADLSRAVLSAVRSAVDGGELAVAVPERVVVERPGPGGAGEWASNVALRLAREAGRPPREV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           AE++ +R+   P V  V + G GF+N+ L+   +  ++  I   G  YG     +     
Sbjct: 64  AEVLRSRLVAAPGVAGVEVTGPGFLNVTLAGDSVGALVDRIAAEGEAYGSGDALREAAPV 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                A P G       R  +V +    L+   G
Sbjct: 124 -----AVPDGS----ELRARIVAEAAGRLVRAQG 148



 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 15/167 (8%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D +R+ +L     +L      +V EQ   NP+F V+YAYAR R +   A      + 
Sbjct: 171 LGDDGLRWALLHPAPHDLP--HGAEVLEQRARNPLFRVRYAYARSRGLV--AGGAALGIV 226

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P            +   L   L E P V+  A     P +LA  L  LA  F    
Sbjct: 227 PGSGPVTG--------EAARVLTGLLGEQPAVLVAAARKGAPDRLARQLVTLADAFFDFH 278

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                 PR         +  +    L  A  +++  GL+++G+ +P+
Sbjct: 279 DSCDVLPRGGEKPGAAHRARL---ALAEAAGTVLAGGLSLLGISAPD 322


>gi|213023066|ref|ZP_03337513.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 189

 Score = 99.6 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 10/183 (5%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVD 321
           + R + +  RD +   +    +  GI+   K+K     + +   ++F        GD + 
Sbjct: 11  YDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA-VESEGATVVFLDEFKNKEGDPMG 69

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
             + K DG Y Y   D+A  K +YE    D ++Y + S    ++ +   +          
Sbjct: 70  VIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDS 129

Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
           + +      + L +DG P K   R G  + L  ++DE    + R  ++  KN ++   + 
Sbjct: 130 VPLEHHMFGMMLGKDGKPFK--TRTGGTVKLADLLDEALERARR--LVAEKNPDMPADEL 185

Query: 440 CKV 442
            K+
Sbjct: 186 EKL 188


>gi|254387532|ref|ZP_05002771.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294815080|ref|ZP_06773723.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326443443|ref|ZP_08218177.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197701258|gb|EDY47070.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294327679|gb|EFG09322.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 335

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 52/110 (47%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+ S  + + +        +E  + D + +ERPR    G  +T  A+ L+ P G  P  +
Sbjct: 4   AELSRTVLHAVCRAVEDGALEVPVPDTVTVERPRPGGRGDWATTIALRLAGPAGKAPRAV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           AE++  RI   P + +V I G GF+NL L       ++  ++  G  YG 
Sbjct: 64  AEILRERIAGTPGIAAVEITGPGFLNLSLVDGSQAALVRRVLEQGPAYGH 113



 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 29/172 (16%)

Query: 417 VGSDSVRFMMLW-----RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           +G++++R+  L      R            +  Q + NP+F V+YA+AR R++ R A  +
Sbjct: 186 LGAEALRWAFLSTAAHDRPRPGP------HLLRQHESNPLFTVRYAHARSRALTRNAAAL 239

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               +         P E   DT+   LI    +YP V+ +A     P +LA +L   A  
Sbjct: 240 GFRGE---------PLEH-VDTALDGLI---GDYPDVLASAARLHAPDRLARHLEATADA 286

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                    ++  L   +         RL L  A  +++  GL+++GV +P+
Sbjct: 287 LLAF-----QHTVLPRGEEKPSAAHRSRLALAEAAGTVLAGGLSLLGVSAPD 333


>gi|221054542|ref|XP_002258410.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193808479|emb|CAQ39182.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 914

 Score = 98.5 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 82/623 (13%), Positives = 185/623 (29%), Gaps = 170/623 (27%)

Query: 76  PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG------------------IEYGRNLI 117
             +DS+ I+  G +N+ ++ +++ +        G                   E      
Sbjct: 156 ELIDSIRISPNGILNIRVADAFVLRDFLQFYRQGRAHIGTAPVGVDYASNNNPEMENPRK 215

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT- 176
            + + V ++F   N    MH+GH +  ++G+ L+++     Y V    +I D    +   
Sbjct: 216 REKSTVLLDFCGVNMAKNMHMGHLKSLLLGNALSNIFRSLNYSVKCRSHIGDWNMNLAIV 275

Query: 177 LALSVFWRYQ------------QALYNNDSDLPEGYYPG--------------------- 203
           L+  + + Y+              +   D+D     Y G                     
Sbjct: 276 LSFLIMFPYEVISGGKINGEKVHNISGADNDDKAESYKGCRTPCISTGQMNKHIDVEHRV 335

Query: 204 --------------------VYLKHVGKELADKYSSELLNFPEEKWL------------- 230
                               +Y K       +K++         KW              
Sbjct: 336 SADYTESEVEKESEKVVEEEIYRKLENSLKEEKFNKGYEQLDPSKWENINLANIEFAYRM 395

Query: 231 --------PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                    + K  S  ++  +   D K + +  +I  S    ++   + ++  I  L  
Sbjct: 396 GKKLFTSSDVFKRISKSSLRMMYEKDEKMIALWDNICKSSKRANKEILNKMK--IKKLID 453

Query: 283 QGYVYEGILPPPKSKTTQKCDM-----DRKQLLFRSTMVG-------------------- 317
           +G  +     P   +  Q  +M      +  LL RS  VG                    
Sbjct: 454 KGESFYVKFVPTILRRLQDANMVFHLEGKSCLLLRSNQVGMNSVNGGCTPNRRKDTHILS 513

Query: 318 ----------------------------DDVDRPLLKSDGSYTYFAADLAYFKCK-YERG 348
                                        +     L++D ++TY A DLA    +     
Sbjct: 514 TKEEHYEVVQVTQELLDQVKRNGVDELKKNFTLVTLENDVAFTYAAIDLAAIHYRVVHEK 573

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDF 407
            + +IYV+  +   +  ++ ++A         +  + L     L  +   +K        
Sbjct: 574 ANKIIYVVDENQRKHFMQIFSIARFAHILSDDVECICLNYGFVLNSENKKMKTKDLCKKN 633

Query: 408 ITLRHVVDEVGSDS------------VRFMMLWRKNS----ELLDFDFCKVKEQSKENPV 451
           I+++ +++ V   +             +  M  +         L + +  VK   ++   
Sbjct: 634 ISVKDMLENVKLTNNNAHEKNEQTNLNKVHMEKKHREKFLLSSLIYSYLSVKNYKRQIIT 693

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLD----FDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
             +++++     I     ++   L      D      I +    + +  +L++H+  +  
Sbjct: 694 SILKHSHTEYLFIINCYNEVSSILGNRKKGDYSSHMSIRKNVLIENNLKKLMLHIIHFNY 753

Query: 508 VIENATIAQEPYKLAFYLYDLAS 530
           V E  T      +L  +L+ L+ 
Sbjct: 754 VTEEVTRNYGVDRLCSFLFILSQ 776


>gi|302558389|ref|ZP_07310731.1| arginine-tRNA ligase [Streptomyces griseoflavus Tu4000]
 gi|302476007|gb|EFL39100.1| arginine-tRNA ligase [Streptomyces griseoflavus Tu4000]
          Length = 324

 Score = 98.1 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 14/164 (8%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  +   ++    + ++   + +R+ +  P     G  +TN A+ L+RP G     +A
Sbjct: 5   ELSRTVLRAVRCAVDEGELRVAVPERVRVAPPGPGGCGDYATNVALQLARPAGRPAQHVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E++  R+  DP V  V I G GF+N+ L+ +    ++  I+ SG  YG     KG  V +
Sbjct: 65  EVLRPRLLRDPGVGDVVITGPGFLNISLADAAPVALVREILRSGTSYGHGDALKGRTVRL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
             VS            R  V  D +A ++   G       +++D
Sbjct: 125 RAVS----------EARAVVHSDVVARVLRSQGA----LVHLDD 154



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 17/142 (11%)

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVH 501
             Q + NP+F V+YA+AR R++ R A D+              P+      +E   L+  
Sbjct: 197 LVQRESNPLFRVRYAHARTRALLRNAGDLGYG-----------PEPGPVGEAEARSLLRV 245

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           LA++PRV+  A     P +LA +L  +A               L   +         RL 
Sbjct: 246 LADHPRVLAAAAAQHAPDRLARHLVAVADA-----LPPLLPAVLPLGEEKPSAAHRARLA 300

Query: 562 LVHAVASIINSGLNIIGVESPN 583
           L  A  +++  GL+++G+++P+
Sbjct: 301 LADAAGTVLAGGLSLLGIDAPD 322


>gi|291447746|ref|ZP_06587136.1| arginyl tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291350693|gb|EFE77597.1| arginyl tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 360

 Score = 97.7 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 22/190 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +++ +G D+ R+ +L     +        +  Q + NP+F V+YA+AR R++ R A  +
Sbjct: 173 ELLERLGPDAARWGLLRAAGHDRAALGPELLV-QGEANPLFRVRYAHARARALTRGAAAL 231

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQ------------------LIVHLAEYPRVIENAT 513
               +   +  +     +   +   Q                  L+  +A++P V+    
Sbjct: 232 GFTAEPAPYDESPAGPAAHVASPAAQAANAAPAATTAYDAAARPLLDLIADHPGVLLAGA 291

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             + P ++A  L  +A   H  +      P L             RL +  A  +++  G
Sbjct: 292 RHRAPDRVARQLEAVA---HAFFDFHDSCPPLPAGDEKPSAAHRARLAIAEAAGTVLAGG 348

Query: 574 LNIIGVESPN 583
           L+++G+ +P 
Sbjct: 349 LSLLGIRAPE 358



 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 27  KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86
            +  R+ +ER R    G  +   A+ L+ P  L  L +A ++  R+  +P V  V I G 
Sbjct: 4   PVPARVRVERTRPGGSGDYACAVALQLAGPAALPALEVARILRERVAAEPGVGRVEITGP 63

Query: 87  GFINLYLSPSYL--RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           GF++  L       R +L+++   G+ YG     +                 H    R A
Sbjct: 64  GFLSFTLDAPAAGDRTVLAAVREQGLGYGHGDALRDEIHQFH----------HAREVRAA 113

Query: 145 VVGDTLASLMAFSGYE 160
           V    +  L+   G  
Sbjct: 114 VTAQAVFRLLVAQGAR 129


>gi|254382307|ref|ZP_04997667.1| arginyl tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341212|gb|EDX22178.1| arginyl tRNA synthetase [Streptomyces sp. Mg1]
          Length = 317

 Score = 97.7 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 22/156 (14%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKK--ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           AD S  +   ++    + ++     + +R+V++R R    G  +T  A  +++  G  P 
Sbjct: 7   ADLSRTVVRAVRRAVEEGELPAGTGVPERVVVDRTRPGGVGEYATAVAFQIAKRAGTAPA 66

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
            +A +I   +   P ++ V I G GF+N  L+     +++  +   G  YG         
Sbjct: 67  EVARVIAGMLAGVPGIERVEITGAGFLNFVLAERSAAELVREVRERGARYG--------- 117

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
               F S +       G  R  VVGD +  ++   G
Sbjct: 118 ----FASPD-------GELRARVVGDAVRRILWSQG 142



 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 53/157 (33%), Gaps = 24/157 (15%)

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             E   F    + +    N  F V+YA+AR R++   A  +    +              
Sbjct: 179 PHETAVFSPRLLLQDEAANEFFRVRYAHARSRALTVNAAQLGFSAEPGPVGGEGGAVVRG 238

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH-WS---HGRENPRLR 546
                      L ++P V+E A   + P ++  +L +LA       +     G E P   
Sbjct: 239 -----------LLDHPLVLEAAAHHRAPERVVRHLVELADALLDFQYRVLPKGGEKPSAA 287

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                                +++  GL ++G+++P+
Sbjct: 288 HRARLALAEAA---------GTVLAGGLALLGIDAPD 315


>gi|2415551|emb|CAA04301.1| arginyl-tRNA synthetase [Campylobacter jejuni]
          Length = 97

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)

Query: 84  AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143
           A  G++N  +S ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R 
Sbjct: 13  AVNGYLNFRISKTFLNELANQALTNPNDFTKGEKNK-ESFLLEYVSANPTGPLHIGHARG 71

Query: 144 AVVGDTLASLMAFSGYEVTREYYIND 169
           AV GDTL  L    GY+   EYY+ND
Sbjct: 72  AVFGDTLTRLARHLGYKFNTEYYVND 97


>gi|239944278|ref|ZP_04696215.1| putative arginyl-tRNA synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|239990733|ref|ZP_04711397.1| putative arginyl-tRNA synthetase [Streptomyces roseosporus NRRL
           11379]
          Length = 382

 Score = 97.3 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 22/190 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +++ +G D+ R+ +L     +        +  Q + NP+F V+YA+AR R++ R A  +
Sbjct: 195 ELLERLGPDAARWGLLRAAGHDRAALGPELLV-QGEANPLFRVRYAHARARALTRGAAAL 253

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQ------------------LIVHLAEYPRVIENAT 513
               +   +  +     +   +   Q                  L+  +A++P V+    
Sbjct: 254 GFTAEPAPYDESPAGPAAHVASPAAQAANAAPAATTAYDAAARPLLDLIADHPGVLLAGA 313

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             + P ++A  L  +A   H  +      P L             RL +  A  +++  G
Sbjct: 314 RHRAPDRVARQLEAVA---HAFFDFHDSCPPLPAGDEKPSAAHRARLAIAEAAGTVLAGG 370

Query: 574 LNIIGVESPN 583
           L+++G+ +P 
Sbjct: 371 LSLLGIRAPE 380



 Score = 83.4 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 12/158 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+ P  L  L +
Sbjct: 4   ADLSRTVLHAVRRAVDEDALRVPVPARVRVERTRPGGSGDYACAVALQLAGPAALPALEV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--RKILSSIVVSGIEYGRNLIGKGTK 122
           A ++  R+  +P V  V I G GF++  L       R +L+++   G+ YG     +   
Sbjct: 64  ARILRERVAAEPGVGRVEITGPGFLSFTLDAPAAGDRTVLAAVREQGLGYGHGDALRDEI 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
                         H    R AV    +  L+   G  
Sbjct: 124 HQFH----------HAREVRAAVTAQAVFRLLVAQGAR 151


>gi|1749406|dbj|BAA13762.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 257

 Score = 96.9 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 80/227 (35%), Gaps = 34/227 (14%)

Query: 213 LADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           L DK         +  E+ L +   +   ++ K+ +D    LNI +D +  E        
Sbjct: 37  LHDKAREFFKRMEDGDEESLKVWARFRDLSITKL-KDTYDRLNIHYDEYDGESQVS---L 92

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDG 329
             +  ++D L     +                + D   LL   +     + + ++ K DG
Sbjct: 93  ELMNKMVDELRSLNLI----------------EEDGGALLIDLSKHDKKLGKAIVQKRDG 136

Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +      D+     +YE+  FD  IYV+ S    Y  +L  +        A+  V +   
Sbjct: 137 TTLSLTRDIGTAYKRYEKYKFDKSIYVVSSQQDMYFSQLFKIFELTGFDWAKKCVHINY- 195

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
                 G+   MS R G  + L  +++    +  +   + +KN E  
Sbjct: 196 ------GLVQGMSTRKGKAVFLDDIMEVAKEEMHK---VMQKNEEKY 233


>gi|224983700|pdb|3GDZ|A Chain A, Crystal Structure Of Arginyl-Trna Synthetase From
           Klebsiella Pneumoniae Subsp. Pneumoniae
 gi|224983701|pdb|3GDZ|B Chain B, Crystal Structure Of Arginyl-Trna Synthetase From
           Klebsiella Pneumoniae Subsp. Pneumoniae
 gi|224983702|pdb|3GDZ|C Chain C, Crystal Structure Of Arginyl-Trna Synthetase From
           Klebsiella Pneumoniae Subsp. Pneumoniae
 gi|224983703|pdb|3GDZ|D Chain D, Crystal Structure Of Arginyl-Trna Synthetase From
           Klebsiella Pneumoniae Subsp. Pneumoniae
          Length = 109

 Score = 96.5 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 2/103 (1%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           +  + L   + +             ++   +      G    N    +++ LG  P  +A
Sbjct: 5   NIQALLSEKVSQALIAAGAPADCEPQVR--QSAKVQFGDYQANGVXAVAKKLGXAPRQLA 62

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108
           E +++ + ++   + V IAG GFIN++L P++L   ++  + S
Sbjct: 63  EQVLSHLDLNGIANKVEIAGPGFINIFLDPAFLADNVNRALQS 105


>gi|207110469|ref|ZP_03244631.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 102

 Score = 95.8 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           LS   L +     +    ++G         K+ +EFVSANPTGP+H+GH R AV GD+LA
Sbjct: 1   LSLDLLERFTQKALELKEKFGSQIKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLA 60

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
            +  F G+EV  EYY+ND G+QI  L LSV+  Y++ +    
Sbjct: 61  KIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKES 102


>gi|29829462|ref|NP_824096.1| arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|29606570|dbj|BAC70631.1| putative arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 352

 Score = 94.6 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  +   ++    + ++   +  R V+  P     G  +TN A+ L+RP G  P  +A
Sbjct: 5   ELSRTVLRAVRCAVDEGELSVAVPVRAVVTPPGPGGCGDYATNIALQLARPAGRPPRQVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPS----YLRKILSSIVVSGIEYGRNLIGKGT 121
           E++   +     V  V I G GF+N++L  +     L + +     +G   G  +     
Sbjct: 65  EILRPHLSRTAGVAGVEITGPGFLNIHLEAATATIALVREILDGHANGHANGHAIGHAID 124

Query: 122 KVNIEFVSANPTGPMHVG---------HCRCAVVGDTLASLMAFSG 158
             +    +     P   G           R  VV D+L  ++A  G
Sbjct: 125 SGHDSHGTPYGHTPTLTGQVIPLRIPYDIRAEVVADSLVRIVASQG 170



 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 19/186 (10%)

Query: 403 RAGDFITLRHVVDE-----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           RAG+ +TLR V        +G+D+ R+ +L     +        +  Q + NP+F ++YA
Sbjct: 179 RAGEAVTLRPVPAPEDPAPLGADAARWALLHPAAHDRPRITADHLA-QRESNPLFRIRYA 237

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +AR R++ R A  +    +    P +V   E         L+  LA YP  +  A     
Sbjct: 238 HARARALTRCAARLGFHGEPGDVPVDVPGAEV--------LVRELAGYPHALSAAAAQHA 289

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           P +LA +L   A  F        ++  L             RL L  A  +++  GL+++
Sbjct: 290 PDRLARHLVATADAFLAF-----QHTVLPLGDEKPSAAHRARLALAEAAGTVLAGGLSLL 344

Query: 578 GVESPN 583
           G+ +P+
Sbjct: 345 GISAPD 350


>gi|239928903|ref|ZP_04685856.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score = 94.6 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  + + ++    + ++   + +R+V+  PR    G  +TN A+ L+ P G     +A
Sbjct: 5   ELSRTVLHAVRRAVDEGELRVTVPERVVVAPPRPGGCGDYATNVALRLACPAGEPARRVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125
           E++   +  D  +  V + G GF+N+ L  +    ++  I+  G  YG      G  V +
Sbjct: 65  EILRPHLLRDGGIAEVVVTGPGFLNISLRSAAPVALVQEILRCGPRYGHGDSLGGRLVRL 124

Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                           R  V  D L  ++   G
Sbjct: 125 RAP----------HEVRAVVHADALGRVLRSQG 147



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 16/167 (9%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D+ R+ +L     +        +  Q ++NP+F V+YA+AR R++ R A D+    +
Sbjct: 223 LGRDAARWALLHPAPHDRPRIGAEHLV-QREDNPLFRVRYAHARTRALLRNAADLGFAPE 281

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                   +            L   LA++PRV+  A   + P +LA +L  +A       
Sbjct: 282 PGPVTGADVQP----------LFQALADHPRVLAAAAAHRAPDRLARHLVAVADA----- 326

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +       L   +         RL L  A  +++  GL+++G+++P+
Sbjct: 327 TPPLLPAVLPVGEEKPSAAHRARLALADAAGTVLAGGLSLLGIDAPD 373


>gi|329939818|ref|ZP_08289119.1| arginyl tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301388|gb|EGG45283.1| arginyl tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 317

 Score = 94.2 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 10/146 (6%)

Query: 14  YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73
            ++      +++  +  R V+  P     G  +TN A+ L+R  G  P  +AE++ AR+ 
Sbjct: 4   AVRSAVEDGELDVVLPSRAVVTPPGPGGSGDYATNIALRLAREAGRPPRDVAEILRARLC 63

Query: 74  IDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132
               V  V ++G GF+N++L+       ++  I   G+ YG +    G +  +  V    
Sbjct: 64  RADGVADVLVSGPGFLNVHLADDLATSALVRRIRADGVRYGYSEECAGDEPVLLRV---- 119

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSG 158
             P  V   R  VV D+L  ++A  G
Sbjct: 120 --PFDV---RAEVVADSLVRIIASQG 140



 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 65/173 (37%), Gaps = 30/173 (17%)

Query: 417 VGSDSVRFMMLW---RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +G D+ R+ +L         +          Q + NP+F V+YA+AR  ++ R       
Sbjct: 165 LGGDASRWALLHPAGHDRPRITAEHLV----QRESNPLFRVRYAHARTCALAR------A 214

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF- 532
                L P      +++       L+  LAEYP  + +A   + P +LA +L   A  F 
Sbjct: 215 GARLHLVPEPGDTAQTDARP----LLRALAEYPHALAHAARHRAPDRLARHLVGTADAFL 270

Query: 533 ---HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
              H     G E P                        +++  GL+++G+ +P
Sbjct: 271 AVQHTVLPLGDEKPSAAHRARLALAEAA---------GTVLAGGLSLLGISAP 314


>gi|328885051|emb|CCA58290.1| arginyl tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 320

 Score = 93.4 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 18/170 (10%)

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +  G+D+ R+ +L R        D   +  Q + N +F V+YA++R R +   A  +   
Sbjct: 168 ETFGADAARWSLL-RAAPGDRPLDPAPLLVQHERNSLFRVRYAHSRARRLLVNAAQLG-- 224

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
             F       +P           L+  L ++P V+  A   + P ++A +L  +A     
Sbjct: 225 --FGPAYETPVPVPG--------LLGVLGDHPVVLLAAARHRAPDRVARHLEAVADALLA 274

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                 ++  L             RL L  A  +++  GL+++G+ +P+ 
Sbjct: 275 F-----QHTVLPLGDEKPSAAHRSRLALAEAAGTVLAGGLSVLGISAPDR 319



 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 10/157 (6%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  +   +++      +   +  R+ +ER R    G  +++ A+ L+RP G   L +
Sbjct: 4   ADLSLTVLRAVRDAVDDGVLRVDVPARVKVERARPGGTGEYASSIALTLARPSGRTALDV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A ++  R++  P +  V + G GF+N  L      +++ +I  +G  YG      GT V 
Sbjct: 64  AGILQERLRDVPGLREVAVTGPGFLNFVLGRDSGAELVHAIREAGTSYGSGTALAGTVVR 123

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +  V+            R  +VG T+  L+   G + 
Sbjct: 124 LAEVT----------ESRALLVGRTVLRLLRSQGADA 150


>gi|195130981|ref|XP_002009929.1| GI14973 [Drosophila mojavensis]
 gi|193908379|gb|EDW07246.1| GI14973 [Drosophila mojavensis]
          Length = 451

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)

Query: 453 YVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIE 510
           Y+ Y  AR  ++ R     +   +   L P + I      D  + QLI  +L  +P+V+E
Sbjct: 315 YILYNSARLETLLRTFQAQVNLGVYESLPPLDKIDLSVLEDELDWQLIYGYLLTFPKVVE 374

Query: 511 NATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           +     E      + L  Y+ DLAS+F  ++ H +   + R    N   +   R+ LV A
Sbjct: 375 STLAQLEQGLCAVHSLVRYIVDLASLFSRYYRHKQILVQQR---TNLMPVLYARIYLVKA 431

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  ++NS L ++G+E  + M
Sbjct: 432 VRQVLNSALALLGIEPVDYM 451


>gi|297192062|ref|ZP_06909460.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151179|gb|EFH30997.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 259

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 11/149 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+ S  +++ +        +       + +ERPR    G  +T  A+ L+R  G   + +
Sbjct: 4   AELSRTVRHAVCRAVEDGALRVDAPRDVKVERPRPGGRGDYATGIALRLARQAGRPAVEV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A  +  RI   P + +V I G GF+N+ L P   + ++  ++  G +YG   +  G    
Sbjct: 64  AAELGHRIAAAPGIAAVDITGPGFLNITLEPDTQQGLVRDVLERGEKYGWTDLT-GAVEE 122

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           I + +            R AV+ DTL  +
Sbjct: 123 ITYRA----------DVRAAVIADTLRRI 141


>gi|320593248|gb|EFX05657.1| arginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 341

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 54/305 (17%)

Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKA 379
            +   +GS TY   D+A    +     FD MIYV+ S    ++ ++ +    +   + + 
Sbjct: 39  VVRYRNGSSTYLLRDVAAAIDRERAFAFDKMIYVVCSRQELHLAQVFSTLDLMGRSDLRE 98

Query: 380 QINVLLCELVRLY-------------RDGMPIKM----------SKRAGD---------F 407
           ++  +  + ++                DG    M           K +GD          
Sbjct: 99  KLQHVGFDRIQHLSERLGGVRTLDAIIDGTSKLMREAIAAELLAEKASGDGDGENVGEEA 158

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           + + H+ D     ++    +  + S    FD  ++   +       +Q  +A  +    +
Sbjct: 159 LEVAHIGDTAAISAILDQDMSHRRSTRSTFDPKRMISLAGY-TGLQLQECHAMLQLNIAE 217

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            +      +      +V+ QE   D +E  L+  +A+YP +  +   + EP  +  YL+ 
Sbjct: 218 LQKQVQAEEDASIDYSVLEQE---DAAE--LLRMMAQYPEMTSSVFKSLEPSIVLAYLHR 272

Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLT-------------MMRLQLVHAVASIINSGL 574
           LA                     +                     L +      ++ +GL
Sbjct: 273 LADAIKTCLDSEEGLDEDEEGSEDEGGEDSDFGNKTPTVGQLKANLSMYENARQVLENGL 332

Query: 575 NIIGV 579
            ++ +
Sbjct: 333 RLLNI 337


>gi|290957374|ref|YP_003488556.1| arginyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646900|emb|CBG69997.1| putative arginyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 398

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 22/198 (11%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  +   ++      ++   +  R V+  P     G  +TN A+ L+RP G  PL +A
Sbjct: 5   ELSRTVLRAVRRAVEGGELSVAVPARAVVTPPGPGGSGDYATNIALQLARPAGRPPLQVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN- 124
           E++   +     V +V I G GF+N++L  +    ++  I+ +    G            
Sbjct: 65  EILRPHLSSTEGVAAVEITGPGFLNIHLDRAATTTLVRRILGTEGTEGTEGTEGTEGTEE 124

Query: 125 ---------IEFVSANPTGPMHVG---HCRCAVVGDTLASLMAFSG----YEVTREYYI- 167
                               + +      R  VV D L  ++A  G     +  R  +I 
Sbjct: 125 AEEGTVFLPYGHSDTLAGQVLRLRIPYDIRAEVVADALGRIVASQGGRVEVDHIRPQHIA 184

Query: 168 ----NDAGAQINTLALSV 181
                D G+ +  +    
Sbjct: 185 AVGHGDDGSPVGPVGPGA 202



 Score = 77.3 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 12/172 (6%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D++R+ +L     +        +  Q   NP+F V+YA+AR R++ R A  +     
Sbjct: 230 LGPDALRWALLHPAAHDRPRITADLLA-QRAGNPLFRVRYAHARVRALTRNAAALGFTAA 288

Query: 477 FDLFPRNVIPQE------SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
                    P E             + L+  L  YP  +  A   + P +LA ++  LA 
Sbjct: 289 PGPLGALCGPAEPYPSATQLTADPSIPLVTALTTYPSTLTRAATLRAPDRLARHMVVLAD 348

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                     ++  L             RL L  A  +++  GL+++G+++P
Sbjct: 349 ALLAF-----QHTVLPRGDEKPSAAHRARLALAEATGTVLAGGLSLLGIDAP 395


>gi|218678095|ref|ZP_03525992.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 81

 Score = 93.1 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/80 (42%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 1  MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
          M LF DF +R+K  L++ID   +   ++   RI +E PRD +HG ++TNAAM+L++PLG 
Sbjct: 1  MNLFTDFEARIKTALEQIDLVREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLGT 60

Query: 60 DPLTIAELIVARIKIDPDVD 79
          +P  +A++I+A+++ D DV 
Sbjct: 61 NPRALADIIIAKLREDADVA 80


>gi|326776602|ref|ZP_08235867.1| DALR anticodon binding domain protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326656935|gb|EGE41781.1| DALR anticodon binding domain protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 360

 Score = 92.3 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +++ +G D+ R+ +L     +        +  Q + NP+F V+YA+AR R++ R A  +
Sbjct: 195 ELLERLGPDAARWGLLRAAGHDRAALGPELLV-QGEANPLFRVRYAHARARALTRGATAL 253

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D   +  +  P    +D +   LI  +A++P V+  A   + P ++A  L  +A  
Sbjct: 254 GFTADAAPYGESPAP----YDEAARPLIDLIADHPGVLLAAARHRAPDRVARQLEAVA-- 307

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
            H  +      P L             RL L  A  +++  GL+++G+ +P 
Sbjct: 308 -HAFFDFHDSCPSLPAGDEKPSAAHRARLALAEAAGTVLAGGLSLLGIRAPE 358



 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 12/158 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+RP GL  L I
Sbjct: 4   ADLSRTVLHAVRRAVDEDALRAPVPARVRVERSRPGGSGDYACAVALQLARPAGLPALEI 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--RKILSSIVVSGIEYGRNLIGKGTK 122
           A ++  R+  +P V  V I G GF++  L    +  R +L ++   G+ YG         
Sbjct: 64  ARILRERVAAEPGVGRVEITGPGFLSFTLDAPAVGDRAVLGAVREQGLGYGHGGALGDEI 123

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
             +           H    R AV    +  L+   G  
Sbjct: 124 HQLH----------HAREVRAAVTAQAVFRLLVAQGAR 151


>gi|213610152|ref|ZP_03369978.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 76

 Score = 91.9 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GFIN++L P++L + +   + S              + +++ + N    MHVGH R  +
Sbjct: 1   PGFINIFLEPAFLAEQVQQALTSDRLGVSQPTR--QTIVVDYSAPNVAKEMHVGHLRSTI 58

Query: 146 VGDTLASLMAFSGYEVTR 163
           +GD     + F G+ V R
Sbjct: 59  IGDAAVRTLEFLGHHVIR 76


>gi|242000538|ref|XP_002434912.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215498242|gb|EEC07736.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 120

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 16/125 (12%)

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           C S+  +A     D   DL     +  E     S + L V LA++   +  A +  EP  
Sbjct: 12  CSSLEEKA-----DCPLDLKCDTSVLHE----PSAIALSVELAKFEDAVFGALVELEPCI 62

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580
           +  YLY L+         GR N  L  V+ ++  ++  RL L HA    ++ GL ++G+ 
Sbjct: 63  VVQYLYSLSHAI------GRANKTL-IVKNHDTTVSSARLLLFHAARLTLSQGLKLLGIP 115

Query: 581 SPNEM 585
             N+M
Sbjct: 116 PLNKM 120


>gi|18446905|gb|AAL68045.1| AT12688p [Drosophila melanogaster]
          Length = 353

 Score = 90.4 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 10/140 (7%)

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R+      +  ++  P  + I      D  + +LI  +L  +P +
Sbjct: 215 ASYILYNSARLEALLRKFNYEVNNCAYEKLPLLDEIDLSVLEDDVDWELIYGYLLTFPEL 274

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +E+     +      + L  Y+ +LA+ F   + H +   + R        +   R+ L+
Sbjct: 275 MESIMDQLDQGHCGLHLLVHYVENLAAAFSRFYYHKKVLLQKR---DELMPILYARIYLI 331

Query: 564 HAVASIINSGLNIIGVESPN 583
            AV  ++N+ L ++G+E  +
Sbjct: 332 KAVRQVLNTALAVLGIEPVD 351


>gi|302536935|ref|ZP_07289277.1| predicted protein [Streptomyces sp. C]
 gi|302445830|gb|EFL17646.1| predicted protein [Streptomyces sp. C]
          Length = 316

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 8/140 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  +   ++      ++   + +R+V+ER R    G  ++  A+ +++   L+P  +
Sbjct: 4   ADLSRAVVQAVRRAVEGGELAAGVPERVVVERTRPGGVGEYASPVALQVAKSARLEPREV 63

Query: 65  AELIVARIKIDPDVD-SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY-------GRNL 116
           A ++  R+  D      V I G GF+N  L+P     ++  + V G  Y        R  
Sbjct: 64  ARVLAGRLLADEPGILGVEITGPGFLNFSLAPLSAAALVREVRVRGTRYGYAPGAEPRGS 123

Query: 117 IGKGTKVNIEFVSANPTGPM 136
           + +     I+     P GP+
Sbjct: 124 VVRAAVRRIQESQGVPDGPV 143



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +  Q + +  F V+YA+AR R++   A       D         P     D     L+  
Sbjct: 184 LLVQDESSEFFRVRYAHARARALGINAG------DLGFVSEPAEPAGPGDDADGHGLLRL 237

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTM 557
           L EYP V+E A   Q P +L  +L  +A       H     G E P              
Sbjct: 238 LGEYPLVLEAAAHHQAPERLTRHLVAVADALLDFQHQVLPKGDEKPSAAHRARLALAEAA 297

Query: 558 MRLQLVHAVASIINSGLNIIGVESPN 583
                     +++  GL ++G+++P+
Sbjct: 298 ---------GTVLAGGLALLGIDAPD 314


>gi|20129025|ref|NP_573046.1| CG8097 [Drosophila melanogaster]
 gi|7293093|gb|AAF48478.1| CG8097 [Drosophila melanogaster]
 gi|54650656|gb|AAV36907.1| RE16047p [Drosophila melanogaster]
 gi|220951846|gb|ACL88466.1| CG8097-PA [synthetic construct]
 gi|220959780|gb|ACL92433.1| CG8097-PA [synthetic construct]
          Length = 446

 Score = 90.4 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 10/140 (7%)

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R+      +  ++  P  + I      D  + +LI  +L  +P +
Sbjct: 308 ASYILYNSARLEALLRKFNYEVNNCAYEKLPLLDEIDLSVLEDDVDWELIYGYLLTFPEL 367

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +E+     +      + L  Y+ +LA+ F   + H +   + R        +   R+ L+
Sbjct: 368 MESIMDQLDQGHCGLHLLVHYVENLAAAFSRFYYHKKVLLQKR---DELMPILYARIYLI 424

Query: 564 HAVASIINSGLNIIGVESPN 583
            AV  ++N+ L ++G+E  +
Sbjct: 425 KAVRQVLNTALAVLGIEPVD 444


>gi|313219483|emb|CBY30407.1| unnamed protein product [Oikopleura dioica]
          Length = 178

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 37/80 (46%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L L     R   S+      E   +LI  G ++ ++F S N   P H+GH R  + G  +
Sbjct: 25  LRLRAEIFRPPCSAPPRKKFEKFTSLITTGKRIVVDFSSPNIAKPFHLGHLRSTITGQCV 84

Query: 151 ASLMAFSGYEVTREYYINDA 170
            +L+   G+EV R  Y+ D 
Sbjct: 85  CNLLEAQGHEVIRVNYLGDW 104


>gi|195393074|ref|XP_002055179.1| GJ18934 [Drosophila virilis]
 gi|194149689|gb|EDW65380.1| GJ18934 [Drosophila virilis]
          Length = 450

 Score = 89.2 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 10/140 (7%)

Query: 453 YVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIE 510
           Y+ Y  AR  ++ R  A  +   +   L P   I      D  + QLI  +L  +P ++E
Sbjct: 314 YILYNSARLETLLRTFAAQVDAGVYEPLPPLEKIDLSVLEDELDWQLIYGYLLTFPELVE 373

Query: 511 NATIAQ-----EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           +  +         + L  Y+ DLAS+F  ++ + +   + R   +N   +   R+ LV A
Sbjct: 374 STLVQLDQGLCAVHLLVRYIVDLASLFSRYYRNKQILVQQR---SNLMPVLYARIYLVKA 430

Query: 566 VASIINSGLNIIGVESPNEM 585
           V  ++N+ L ++G++  + M
Sbjct: 431 VREVLNAALALLGIQPVDYM 450


>gi|213608057|ref|ZP_03368883.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
          Length = 87

 Score = 88.8 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 1  MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
          M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1  MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92
          P  +AE ++  + +      V IAG GFIN +
Sbjct: 55 PRQLAEQVLTHLDLSGIASKVEIAGPGFINYF 86


>gi|194768969|ref|XP_001966583.1| GF21913 [Drosophila ananassae]
 gi|190617347|gb|EDV32871.1| GF21913 [Drosophila ananassae]
          Length = 442

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 13/188 (6%)

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R     +L  ++  +G  +V   +   +++         +          Y+ Y  AR  
Sbjct: 259 RPAGSCSLDTLMRRLGEAAVIVDLFSVRHASAACVVRNGMGSSKG---ASYILYNSARVE 315

Query: 463 SIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQE--- 517
           ++ R          +D L P   I      D  + QLI   L  +P V+E      E   
Sbjct: 316 TLLRSFDSQVAAGVYDPLPPLEEIDLSILEDEMDWQLIFSCLLTFPEVLETTIDQLEQGH 375

Query: 518 --PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
              + L  YL +LA+VF  ++   +   + R        +   R+ LV AV  ++N  L+
Sbjct: 376 VGIHLLIRYLENLATVFSRYYRQKKVLVQKRDQLV---PILYARITLVMAVRQVMNQALS 432

Query: 576 IIGVESPN 583
           ++G+   +
Sbjct: 433 LLGILPVD 440


>gi|182435977|ref|YP_001823696.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178464493|dbj|BAG19013.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 360

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 8/172 (4%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +++ +G D+ R+ +L     +        +  Q + NP+F V+YA+AR R++ R A  +
Sbjct: 195 ELLERLGPDAARWGLLRAAGHDRAALGPELLV-QGEANPLFRVRYAHARARALTRGATAL 253

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
               D   +  +  P    +D +   L   +A++P V+  A   + P ++A  L  +A  
Sbjct: 254 GFTADAAPYGESPAP----YDEAARPLTDLIADHPGVLLAAARHRAPDRVARQLEAVA-- 307

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
            H  +      P L             RL L  A  +++  GL+++G+ +P 
Sbjct: 308 -HAFFDFHDSCPSLPAGDEKPSAAHRARLALAEAAGTVLAGGLSLLGIRAPE 358



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 8/156 (5%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           AD S  + + ++    +  +   +  R+ +ER R    G  +   A+ L+RP GL  L I
Sbjct: 4   ADLSRTVLHAVRRAVDEDALRAPVPARVRVERSRPGGSGDYACAVALQLARPAGLPALEI 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124
           A ++  R+  +P V  V I G GF++  L            V      G          +
Sbjct: 64  ARILRERVAAEPGVGRVEITGPGFLSFTLDAPA--------VGDRAVLGAVREQGLGYGH 115

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              +        H    R AV    +  L+   G  
Sbjct: 116 GGALGGEIHQLHHAREVRAAVTAQAVFRLLVAQGAR 151


>gi|295836506|ref|ZP_06823439.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
 gi|295826064|gb|EFG64651.1| arginine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 324

 Score = 88.4 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 20/158 (12%)

Query: 5   ADFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+ S  +   L+    +    +V + + +R+ +  PR   +G  + N A++ + P    P
Sbjct: 4   AELSRTVLGALRHAVREGAVAEVSEGVAERVTVAVPRPGGYGDYACNVALLAAGPARTSP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKG 120
           L +A L+  R++ DP +  V + G GF+N  L+ P+   + + +               G
Sbjct: 64  LALAALLRERLRHDPRLAEVRVTGPGFLNFRLAGPASYERDVVA-----EAGRPGDALAG 118

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            ++ +      P G       R  V+ + L  L+   G
Sbjct: 119 QRLVLR-----PDG------ARAHVLAEALVRLVRAQG 145



 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 18/214 (8%)

Query: 374 VSEKKAQINVLLCELVRLYR-DGMPIKMSKRAGD---FITLRHVVDEVGSDSVRFMMLWR 429
           +    A+ +VL   LVRL R  G   ++    G+             +  D+ R+ +L  
Sbjct: 123 LRPDGARAHVLAEALVRLVRAQGGEARLDATGGEPLRAAPPYEATAPLDPDTRRWALLHT 182

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             +E    D   +  Q  ENP+F V+YA+AR R++ R A D+    +         P  +
Sbjct: 183 APAERPRLDAGLLV-QRVENPLFLVRYAHARARALVRNAADLGYGPEPGDSGPEAAPLLA 241

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                           P V+  A   + P +LA  L  LA    G   H R    L    
Sbjct: 242 LLAEH-----------PAVLLRAAEHRAPDRLARRLVRLADALLGF--HDRTGGLLPLGG 288

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                    RL L  A  +++  GL ++G+ +P 
Sbjct: 289 LKPLAAHRARLALAEAAGTVLAGGLTLLGISAPQ 322


>gi|195044434|ref|XP_001991822.1| GH12874 [Drosophila grimshawi]
 gi|193901580|gb|EDW00447.1| GH12874 [Drosophila grimshawi]
          Length = 441

 Score = 88.1 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 451 VFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R  A  +       L P + I      D  + Q++  +L  +P +
Sbjct: 303 ASYILYNSARLETLLRTFAAQVDAGAYEPLPPLDKIDLSLLEDELDWQMLYGYLLTFPNL 362

Query: 509 IENATIAQ-----EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +E+            + +  Y+ DLAS+F  ++   R    L   ++N       R+ LV
Sbjct: 363 VESTLSQLKHGQCAVHLIVRYIVDLASLFSRYY---RSKQILVQKRSNLMPTLYARIYLV 419

Query: 564 HAVASIINSGLNIIGVESPNEM 585
            AV  ++NS L ++G++  + M
Sbjct: 420 KAVRQVLNSALALLGIQPVDYM 441


>gi|242013915|ref|XP_002427644.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212512074|gb|EEB14906.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 271

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HL 502
           ++      +V Y  +R  +I  +  + +  +    L P + +  +   +  E  L+  +L
Sbjct: 127 ETGNKGGTFVLYNVSRLAAIKAKYFQRVNDNFYPKLPPVDELSFKELTEFEEWSLLFNYL 186

Query: 503 AEYPRVIENATIAQ-----EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR---K 554
            EYP +IE +           + +  YL++L S+F  ++       R+R +  +      
Sbjct: 187 LEYPSLIEKSARDLIDGKPAIHNICNYLFNLCSLFSVYY------RRVRILLDSKEHLIP 240

Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           L   R  L  A+  ++ + LN++ VE+ N M
Sbjct: 241 LLQSRFFLCQAIEQVLRNCLNLLNVETVNAM 271


>gi|297596142|ref|NP_001042078.2| Os01g0158500 [Oryza sativa Japonica Group]
 gi|255672893|dbj|BAF03992.2| Os01g0158500 [Oryza sativa Japonica Group]
          Length = 80

 Score = 87.3 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  ++F S N    MHVGH R  ++GDTLA +  F+  EV R  ++ D G Q+  L + 
Sbjct: 16  KRAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGDWGTQVLNLNVL 75

Query: 181 VFWRY 185
           +F ++
Sbjct: 76  IFKQF 80


>gi|76154141|gb|AAX25642.2| SJCHGC06796 protein [Schistosoma japonicum]
          Length = 156

 Score = 86.9 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
             V I++ S N   P H+GH R AV G+ + ++    G++V    YI D G Q + LA  
Sbjct: 32  ETVVIDYSSPNIAKPFHLGHFRAAVTGNFVKNINEAFGHKVIGINYIGDWGTQFDILASG 91

Query: 181 V-FWRYQQALYNNDSD 195
              +  +  L  N  +
Sbjct: 92  FSKYGDEDELQRNPVE 107


>gi|291437229|ref|ZP_06576619.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291340124|gb|EFE67080.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 351

 Score = 86.5 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 10/131 (7%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           + +R+V+  PR    G  +TN A+ L+ P G     +AE++   +  D  +  V + G G
Sbjct: 3   VPERVVVAPPRPGGCGDYATNVALRLACPAGEPARRVAEILRPHLLRDGGIAEVVVTGPG 62

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N+ L  +    ++  I+  G  YG      G  V +                R  V  
Sbjct: 63  FLNISLRSAAPVALVQEILRCGPRYGHGDSLGGRLVRLRAP----------HEVRAVVHA 112

Query: 148 DTLASLMAFSG 158
           D L  ++   G
Sbjct: 113 DALGRVLRSQG 123



 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 16/167 (9%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D+ R+ +L     +        +  Q ++NP+F V+YA+AR R++ R A D+    +
Sbjct: 199 LGRDAARWALLHPAPHDRPRIGAEHLV-QREDNPLFRVRYAHARTRALLRNAADLGFAPE 257

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
                   +            L   LA++PRV+  A   + P +LA +L  +A       
Sbjct: 258 PGPVTGADVQP----------LFQALADHPRVLAAAAAHRAPDRLARHLVAVADA----- 302

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           +       L   +         RL L  A  +++  GL+++G+++P+
Sbjct: 303 TPPLLPAVLPVGEEKPSAAHRARLALADAAGTVLAGGLSLLGIDAPD 349


>gi|302554156|ref|ZP_07306498.1| arginyl tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302471774|gb|EFL34867.1| arginyl tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 357

 Score = 86.1 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 52/110 (47%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A+ S  + + ++      ++   + +R V+  P     G  +TN A+ L+   G  P  +
Sbjct: 4   AELSRAVLHAVRRAVDAGELSVTVPERAVVTPPGPGGCGDYATNIALQLAGAAGQQPRRV 63

Query: 65  AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114
           AE++ AR+  +     V + G GF+N+ L  +    +++ I+  G  YG 
Sbjct: 64  AEILRARLLDECRFTDVVVTGPGFLNVSLRSTASAGLVAEILRRGRRYGH 113



 Score = 69.9 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 24/171 (14%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D+ R+ +L     +        +  Q + NP+F V+YA+AR R++ R A       D
Sbjct: 205 LGRDAARWALLHPAAHDRPRITGDHLV-QRETNPLFRVRYAHARTRALLRNA------AD 257

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
               P       S+       L+  L ++PR++  +     P +LA +L  +A       
Sbjct: 258 LGFAPEPGPVHASDTAP----LLAALGDHPRLLAASATHHTPDRLARHLVTVADA----- 308

Query: 537 SHGRENPRLRFVQANNRKL----TMMRLQLVHAVASIINSGLNIIGVESPN 583
                 P L  V     +        RL L  A  +++  GL+++G+++P 
Sbjct: 309 ----TLPVLPAVLPLGEEKPSAAHRARLALAEAAGTVLAGGLSLLGIDAPE 355


>gi|313230750|emb|CBY08148.1| unnamed protein product [Oikopleura dioica]
          Length = 144

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            ++ I  G ++ ++F S N   P H+GH R  + G  + +L+   G+EV R  Y+ D 
Sbjct: 13  WKSRIRTGKRIVVDFSSPNIAKPFHLGHLRSTITGQCVCNLLEAQGHEVIRVNYLGDW 70


>gi|333024413|ref|ZP_08452477.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332744265|gb|EGJ74706.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 326

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 60/158 (37%), Gaps = 18/158 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+ S  +   L+      +V+     +L R+ +  PR   +G  + N A++ +      P
Sbjct: 4   AELSRTVLGALRRAVAAGEVDSVAADVLARVTVAVPRPGGYGDYACNVALVAAGAARTSP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKG 120
           L +A L+  R++ DP +  V + G GF+N  L  P    + L +  ++            
Sbjct: 64  LALAALLRERLRHDPRLADVRVTGPGFLNFALADPGTYERDLVAETLAPRYGDALAGHHV 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           T   +                R  V+ + +A L    G
Sbjct: 124 TLRPLG--------------ARAHVLAEAVARLTRAQG 147



 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 14/163 (8%)

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +S R+ +L    ++    D   +  Q  ENP+F V+YA++R  ++ R A  +    +   
Sbjct: 175 ESRRWALLHTAPADRPRLDAALLV-QRVENPLFLVRYAHSRALALVRNAAALGYAPEPGD 233

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +  P  +                P V+  A   + P +LA  L  +A        H 
Sbjct: 234 SGPHAAPLLALLAEH-----------PAVLRRAAEHRAPDRLARRLVRVADALLDL--HD 280

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           R    L             RL L  A  +++  GL ++G+ +P
Sbjct: 281 RTGGLLPLGGLKPGAAHRARLALAEAAGTVLAGGLTLLGISAP 323


>gi|268325384|emb|CBH38972.1| arginyl-tRNA synthetase, C-terminus [uncultured archaeon]
          Length = 67

 Score = 85.7 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               +P+++A Y  +LA  F+  +   R  P L      + +    RL LV     ++++
Sbjct: 2   ASDLKPHRIAKYARELAEYFNLFY---RYCPVLN----ADEEHRKARLALVDCARVVLSN 54

Query: 573 GLNIIGVESPNEM 585
            L+++G+++P EM
Sbjct: 55  VLDVLGIKAPEEM 67


>gi|260906190|ref|ZP_05914512.1| arginyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 300

 Score = 85.4 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           + +R       +     +G+D  R+M      +     D  + +    +NPV +VQ  +A
Sbjct: 125 IDERISSSTERQPRQQTMGTDIRRYMAAREIPASAHLPDARQWRRAHPDNPVHFVQVTHA 184

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
               I    +     +D   F    +  ++E   +        A++      A  A EP 
Sbjct: 185 AACRIR--RRAAAAGIDGWAFDPTALSDDTETALAAAL-----ADFIATTARAASAGEPQ 237

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           ++AF L  ++ +F       +  P    +  +  +L   RL L  A   ++ +GL+++GV
Sbjct: 238 RIAFLLEAVSQLF---LDWTQSCPVTPTLDEDITRLHASRLVLDRAAIIVLATGLSLLGV 294

Query: 580 ESPNEM 585
            +P  M
Sbjct: 295 SAPERM 300



 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 49/110 (44%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
             + L   L  I     ++   +    + R +   HGH  +  A+  +  +  D  ++A 
Sbjct: 6   LQTALARALASIASARGIDSDRIPEPTLRRGQTPRHGHWVSPIALRSAGAVHTDSRSLAV 65

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116
            I +R+  D  +  V +AG GF+N+ L+PS L  I + IV +   +G   
Sbjct: 66  EIASRLHDDASIAEVEVAGPGFLNITLTPSALAVIAADIVAADDHFGPEQ 115


>gi|318075516|ref|ZP_07982848.1| arginyl tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 314

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 18/158 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+ S  +   L+      +V+     +L R+ +  PR    G  + N A++ +      P
Sbjct: 4   AELSRTVLGALRRAVAAGEVDSVAADVLARVTVGVPRPGGDGDYACNVALVAAGAARTSP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKG 120
           L +A L+  R++ DP +  V + G GF+N  L  P    + L +  ++            
Sbjct: 64  LALAALLRERLRHDPRLADVRVTGPGFLNFALADPGTYERDLVAETLAPRYGDALAGHHV 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           T   +                R  V+ + +A L    G
Sbjct: 124 TLRPLG--------------ARAHVLAEAVARLTRAQG 147


>gi|21223713|ref|NP_629492.1| arginyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|13276797|emb|CAC33916.1| putative arginyl tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 347

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 13/155 (8%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  + + ++      ++   +  R V+  P     G  +T  A+ L+RP G  P  +A
Sbjct: 5   ELSRTVLHAVRRAVDAGELSVAVPTRAVVAPPGPGGCGDYATGIALQLARPAGQPPFRVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           E++   +     +  V + G GF+N+ L  +     +++ I+  G  YG      G  V 
Sbjct: 65  EVLRPYLVGTDGITDVVLTGPGFLNISLDRAASDVGLVAEILRRGDRYGHADQPDGRVVQ 124

Query: 125 IEFVSANPTGPMHVGH-CRCAVVGDTLASLMAFSG 158
                      +H  H  R  VV +  A L+   G
Sbjct: 125 -----------LHCPHDLRAVVVAEASARLLRSQG 148



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ---- 549
           +E  L+  LA++PRV+  A   + P +LA +L  +A             P L  V     
Sbjct: 261 AERDLLAALADHPRVLAAAADHRAPDRLARHLVTVADA---------ALPFLPTVLPRGG 311

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                    RL L  AV +++  GL ++G+++P 
Sbjct: 312 EKPSAAHRARLALAEAVGAVLAGGLALLGIDAPE 345


>gi|169839402|ref|ZP_02872590.1| Arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 66

 Score = 85.4 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
               P  +A YL+D A +F+  ++          ++  ++K+   R+ L    A ++  G
Sbjct: 1   ENYRPNIIADYLFDTAKLFNNFYNSS------SILKEEDKKVMDARILLARKTAFVLKEG 54

Query: 574 LNIIGVESPNEM 585
           L+++G+ + N M
Sbjct: 55  LSLLGINTVNRM 66


>gi|318060726|ref|ZP_07979449.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 326

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 18/158 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+ S  +   L+      +V+     +L R+ +  PR    G  + N A++ +      P
Sbjct: 4   AELSRTVLGALRRAVAAGEVDSVAADVLARVTVGVPRPGGDGDYACNVALVAAGAARTSP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKG 120
           L +A L+  R++ DP +  V + G GF+N  L  P    + L +  ++            
Sbjct: 64  LALAALLRERLRHDPRLADVRVTGPGFLNFALADPGTYERDLVAETLAPRYGDALAGHHV 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           T   +                R  V+ + +A L    G
Sbjct: 124 TLRPLG--------------ARAHVLAEAVARLTRAQG 147



 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 14/164 (8%)

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +S R+ +L    ++    D   +  Q  ENP+F V+YA++R  ++ R A  +    +   
Sbjct: 175 ESRRWALLHTAPADRPRLDAALLV-QRVENPLFLVRYAHSRALALVRNAAALGYTPEPGD 233

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +  P  +                P V+  A   + P +LA  L  +A        H 
Sbjct: 234 SGPHAAPLLALLAEH-----------PAVLRRAAEHRAPDRLARRLVRVADALLDL--HD 280

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           R    L             RL L  A  +++  GL ++G+ +P 
Sbjct: 281 RTGGLLPLGGLKPGAAHRARLALAEAAGTVLAGGLTLLGISAPQ 324


>gi|302521926|ref|ZP_07274268.1| arginyl tRNA synthetase [Streptomyces sp. SPB78]
 gi|302430821|gb|EFL02637.1| arginyl tRNA synthetase [Streptomyces sp. SPB78]
          Length = 326

 Score = 84.2 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 60/158 (37%), Gaps = 18/158 (11%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
           A+ S  +   L+      +V+     +L R+ +  PR   +G  + N A++ +      P
Sbjct: 4   AELSRTVLGALRHAVAAGEVDSVAADVLARVTVGVPRPGGYGDYACNVALVAAGAARTSP 63

Query: 62  LTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKG 120
           L +A L+  R++ DP +  + + G GF+N  L  P    + L +  ++            
Sbjct: 64  LALAALLRERLRHDPRLADIRVTGPGFLNFALADPGTYERDLVAETLAPRYGDALAGHHV 123

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           T   +                R  V+ + +A L    G
Sbjct: 124 TLRPLG--------------ARAHVLAEAVARLTRAQG 147



 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 14/164 (8%)

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           +S R+ +L    ++    D   +  Q  ENP+F V+YA++R  ++ R A  +    +   
Sbjct: 175 ESRRWALLHTAPADRPRLDAALLV-QRVENPLFLVRYAHSRALALVRNAAALGYAPEPGD 233

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
              +  P  +                P V+  A   + P +LA  L  +A        H 
Sbjct: 234 SGPHAAPLLALLAEH-----------PAVLRRAAEHRAPDRLARRLVRVADALLDL--HD 280

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
           R    L             RL L  A  +++  GL ++G+ +P 
Sbjct: 281 RTGGLLPLGGLKPGAAHRARLALAEAAGTVLAGGLTLLGISAPQ 324


>gi|328711001|ref|XP_003244420.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           [Acyrthosiphon pisum]
          Length = 371

 Score = 83.8 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 82/195 (42%), Gaps = 15/195 (7%)

Query: 399 KMS-KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
           KMS  R         ++ ++   S+ + +L  ++ ++++ +       S ++   ++ Y 
Sbjct: 184 KMSANRIESDEYPIDIISKLCHASIVYELLSVRHCKVINTECD----TSNKDSGIFIMYN 239

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENATIA 515
           Y+R   +++  +    +  ++  P    I         E  LI+ HL+ +P VI+ +   
Sbjct: 240 YSRLCQVWKAYEKGVIENHYEPLPDIGSINFGLLTSKEEWILILNHLSVFPLVIQQSVEH 299

Query: 516 Q-----EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                 + ++L  +L +++S     +        L    ++   L   RL LV +   + 
Sbjct: 300 LLSANVDVHRLCKFLMEMSSAVSLFYHRHH---ILSDPISSLLPLMYARLYLVKSSIQVY 356

Query: 571 NSGLNIIGVESPNEM 585
            +   ++G+E+ +EM
Sbjct: 357 ENVFQLLGIEAVSEM 371


>gi|322784396|gb|EFZ11367.1| hypothetical protein SINV_09335 [Solenopsis invicta]
          Length = 459

 Score = 83.0 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 81/219 (36%), Gaps = 25/219 (11%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF-- 437
            +   + +L  L              DF  LR++ + +    V F ++  K S  +    
Sbjct: 253 YVKYKMDQLAELSEHKFIEGEKNNVKDF-FLRNLANAI----VIFELMAVKPSRSVIIRT 307

Query: 438 -DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
            DF   +  +      +  Y  AR  +I  +  +     D+   P       S+    E 
Sbjct: 308 NDFETDRSITNTRGASFALYNTARIATILTKHNEKVLRGDYPKLPDIKNVDFSQLQEEEW 367

Query: 497 QLIVH-LAEYPRVIENATIAQEPY------KLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           +LI + +  YP +I N     EP        +  +L  L   F  ++       ++R + 
Sbjct: 368 ELIYNFIFGYPEMINNCLK-YEPSFHIHPQVVCLFLSRLCQKFSVYY------RKIRILT 420

Query: 550 ANNRKL---TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
                L    + RL ++ A+  +I + L+I+G++  + M
Sbjct: 421 EGGDHLIPKMVARLYMLRALQVVIENALDILGIKPVSRM 459


>gi|289769088|ref|ZP_06528466.1| arginyl tRNA synthetase [Streptomyces lividans TK24]
 gi|289699287|gb|EFD66716.1| arginyl tRNA synthetase [Streptomyces lividans TK24]
          Length = 347

 Score = 83.0 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 11/154 (7%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  + + ++      ++   +  R V+  P     G  +T  A+ L+RP G  P  +A
Sbjct: 5   ELSRTVLHAVRRAVDAGELSVAVPTRAVVAPPGPGGCGDYATGIALQLARPAGQTPFRVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVN 124
           E++ + +     +  V + G GF+N+ L  +     +++ I+  G  YG      G  V 
Sbjct: 65  EVLRSYLVGTDGITDVVLTGPGFLNISLDRAASDVGLVAEILRRGDRYGHADQPDGRVVQ 124

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +                R  VV +  A L+   G
Sbjct: 125 LRCP----------HDLRAVVVAEASARLLRSQG 148



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +E  L+  LA++PRV+  A   + P +LA +L  +A       +       L        
Sbjct: 261 AERDLLAALADHPRVLAAAADHRAPDRLARHLVTVADA-----ALLFLPTVLPRGGEKPS 315

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                RL L  AV +++  GL ++G+++P 
Sbjct: 316 AAHRARLALAEAVGAVLAGGLALLGIDAPE 345


>gi|294952754|ref|XP_002787446.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239902421|gb|EER19242.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 236

 Score = 83.0 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 72/214 (33%), Gaps = 14/214 (6%)

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
           F EE          V A+     D+      Q    IS   F        R  I+ L  Q
Sbjct: 1   FDEEPDFKKRSQEEVVALQSG--DEYARKAWQICCDISRKSFEEVYS---RLGIEGLKEQ 55

Query: 284 GYVYEGILPPPKSKTTQK----CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           G  +   +  P  +  +K     + +  + +F        V   ++KSDG Y Y + D+ 
Sbjct: 56  GESFYNEMIGPIVEKLEKEGLVVESNGAKCIFTDN---YQVPMMVVKSDGGYGYDSTDVT 112

Query: 340 YFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               +  +   D ++Y+       + K+L  VA            L      +       
Sbjct: 113 AVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPPQTKLEYLGFGVVCGDDGK 172

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           K   R+G  + L  ++DE   D  R  +  R N+
Sbjct: 173 KFKTRSGATVKLTDLLDE-AEDRARKELESRLNA 205


>gi|297202381|ref|ZP_06919778.1| arginyl tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197710100|gb|EDY54134.1| arginyl tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 397

 Score = 82.7 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)

Query: 43  GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           G  +TN A+ L+RP G  PL +AE++  R+     +  V + G GF+N+ L  S    ++
Sbjct: 42  GDYATNVALQLARPAGQPPLRVAEILRQRLVQSDGIGDVVVTGPGFLNISLRGS-GDALV 100

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH-CRCAVVGDTLASLMAFSG 158
             I+  G+ YG      G  V            +H  H  R  VV D +A ++   G
Sbjct: 101 REILRLGLRYGHAERPTGQLVQ-----------LHAPHEVRAVVVMDAVARILRSQG 146



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 70/194 (36%), Gaps = 37/194 (19%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           +G D+ R+ +L     +        +  Q + NP+F V+YA+AR R++ R A D+    +
Sbjct: 212 LGRDAARWALLHPAPHDRPRITADHLV-QRESNPLFRVRYAHARTRALSRNAADLGFHAE 270

Query: 477 -FDLFPRNVIPQE-----------SEFDTSELQLI-----------VHLAEYPRVIENAT 513
             D+ PR                  E   +E  +              LA++PRV++ A 
Sbjct: 271 PGDVHPRGDTEAAVPETGVRETDVQETVVAETAVAETVVPDTTTLRNVLADHPRVLQAAA 330

Query: 514 IAQEPYKLAFYLYDLASVFHGHWS----HGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +   P +LA +L  +A       +     G E P                +         
Sbjct: 331 VHHAPDRLARHLVTVADAVLPFLAVVLPRGAEKPSAAHRARLALAEAAGAVLAGGLT--- 387

Query: 570 INSGLNIIGVESPN 583
                 ++G+ +P+
Sbjct: 388 ------LLGIGAPD 395


>gi|349615|gb|AAA72383.1| arginyl-tRNA synthetase [Buchnera aphidicola]
          Length = 130

 Score = 82.3 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 8/138 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +     S LK ++ +      ++K     I++    D    +   N  + +++    D
Sbjct: 1   MNI----KSILKKHIIQSLTNNGIKKS--SDILVYNTYDKKPWNYQINGIINIAKHTNQD 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
             T+A+ I  +++I     S+ ++  GFIN++L+ +++ K L   + S     +  + K 
Sbjct: 55  SYTLAKKIAIKMQIHEMYKSIQVSQPGFINIFLNETWMFKKLEKKINSIRLDVK--LQKP 112

Query: 121 TKVNIEFVSANPTGPMHV 138
             + I++ S N    MHV
Sbjct: 113 KNIVIDYSSPNIAKDMHV 130


>gi|195567018|ref|XP_002107072.1| GD17255 [Drosophila simulans]
 gi|194204469|gb|EDX18045.1| GD17255 [Drosophila simulans]
          Length = 100

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           + + N   Y+ Y Y R  SI R + + F +L   L   N++         E +L   L +
Sbjct: 3   EDRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIV----LAHEKEWKLAKTLLK 58

Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544
              ++   +     + L  + +++ +V    +       +
Sbjct: 59  LHDILIKCSKELFLHFLCEFCFEVCTVLTEFYDSCYCIEK 98


>gi|116203205|ref|XP_001227414.1| hypothetical protein CHGG_09487 [Chaetomium globosum CBS 148.51]
 gi|88178005|gb|EAQ85473.1| hypothetical protein CHGG_09487 [Chaetomium globosum CBS 148.51]
          Length = 610

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 74/264 (28%), Gaps = 74/264 (28%)

Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            +    G+ TY   D A    + E+  FD MIYV+ ++   Y +R+      +       
Sbjct: 212 VVRGRTGTTTYLLRDFAAILERDEKYAFDKMIYVVSTEQDLYFRRVFRTLELMGRSD--- 268

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
              L   ++    G  + M  R G+   L  ++D                          
Sbjct: 269 ---LAVRLQHVNFGKVLGMYSRLGNVQLLSDILD-------------------------- 299

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
              QS+E               + RQ +     ++         P  +      L+    
Sbjct: 300 ---QSRE-----------AMHGVMRQNEVKCSQVEDSDAVAEKCPDVTAMTLKTLE---- 341

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRL 560
               P  I              YL  L       +        L+ V     R + + R 
Sbjct: 342 ----PSTILT------------YLCRLTHQLSSCYD------VLQVVGTEGGRAVVLARA 379

Query: 561 QLVHAVASIINSGLNIIGVESPNE 584
            L      ++ +G+ ++G+     
Sbjct: 380 ALDEGARLVLETGMRLLGLSPVES 403



 Score = 78.4 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 13/163 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
            YL +I  ++   +  +    ++ P   A+G L      +  +         AEL+ A  
Sbjct: 43  AYLADILARLAGCEAAVAYESLQVPGAPANGDLVLPVPRLRIKG-KKSAEQCAELVAAFP 101

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYL-----------RKILSSIVVSGIEYGRNLIGKGT 121
           K  P        G   +  + +P  L           +    S + +G+           
Sbjct: 102 KNHPLFREPGAVG-IHLPFFFAPLSLPRLILPYIFQRQHSYGSDLDAGLRDHALPTQGRK 160

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           KV +EF S N     H GH R  ++G  +A+L    G++V + 
Sbjct: 161 KVVLEFSSPNIAKEFHTGHLRSTIIGAFIANLYKTMGWDVVKH 203


>gi|195164225|ref|XP_002022949.1| GL16554 [Drosophila persimilis]
 gi|194105011|gb|EDW27054.1| GL16554 [Drosophila persimilis]
          Length = 447

 Score = 81.9 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 86/204 (42%), Gaps = 18/204 (8%)

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ +      ++MS   GDF     ++  +G+ +V   +   +++         V+  S
Sbjct: 251 DMILMAMHRNGVRMSSSHGDF---DGLIQRLGAAAVIVDLFEVRHASA----ASVVRNGS 303

Query: 447 KEN-PVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLA 503
             +    Y+ Y  AR  ++ R     +   +   L P + I      D  + +LI  +L 
Sbjct: 304 GGSKGASYILYNSARLETLLRTFNAQVEAGVYQPLPPLDDIDLSLLEDDLDWKLIYGYLL 363

Query: 504 EYPRVIENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +P V+E+     +      + L  Y+  LA+VF  ++   +   ++R        +   
Sbjct: 364 PFPEVVESTLNLLQQGQCDVHLLVRYISSLAAVFSRYYRQKKILVQMRDQLM---PVLYA 420

Query: 559 RLQLVHAVASIINSGLNIIGVESP 582
           R+ L+ AV  ++N  L+++G+E  
Sbjct: 421 RVYLIKAVRQVLNVALSLLGIEPV 444


>gi|195164221|ref|XP_002022947.1| GL16553 [Drosophila persimilis]
 gi|194105009|gb|EDW27052.1| GL16553 [Drosophila persimilis]
          Length = 447

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 89/214 (41%), Gaps = 18/214 (8%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           + + + +   +++ +      ++MS   GDF     ++  +G+ +V   +   +++    
Sbjct: 241 RDSYLALRSKDMILMAMHRNGVRMSSSHGDF---DGLIQRLGAAAVIVDLFEVRHASA-- 295

Query: 437 FDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTS 494
                V+  S  +    Y+ Y  AR   + R     +   +   L P + I      D  
Sbjct: 296 --ASVVRNGSGGSKGASYILYNSARLERLLRTFNAQVEAGVYQPLPPLDDIDLSLLEDDL 353

Query: 495 ELQLIV-HLAEYPRVIENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548
           + +LI  +L  +P V+E+     +      + L  Y+  LA+VF  ++   +   ++R  
Sbjct: 354 DWKLIYGYLLPFPEVVESTLNLLQQGQCDVHLLVRYISSLAAVFSRYYRQKKILVQMRDQ 413

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
                 +   R+ L+ AV  ++N  L+++G+E  
Sbjct: 414 LM---PVLYARVYLIKAVRQVLNVALSLLGIEPV 444


>gi|404607|gb|AAD10550.1| uncertain [Mycoplasma genitalium]
          Length = 106

 Score = 81.5 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           L    + LY++   +++SKRAG+ IT+  ++  +  D+ R+ ML + N  ++  D     
Sbjct: 1   LHYNWITLYKNKELVRLSKRAGNVITIETMLSMISEDAARWFMLSQNNGTIIKIDLDIAN 60

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
            Q+  NPV+YVQYA+AR  SI R A     D   ++   +++  E E  
Sbjct: 61  LQNSANPVYYVQYAFARMNSILRIA---NSDQLKEITDCSLLINEKEIS 106


>gi|195355341|ref|XP_002044150.1| GM22556 [Drosophila sechellia]
 gi|194129439|gb|EDW51482.1| GM22556 [Drosophila sechellia]
          Length = 446

 Score = 81.1 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 59/140 (42%), Gaps = 10/140 (7%)

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R+         ++  P  + I      D  + +LI  +L  +P +
Sbjct: 308 ASYILYNSARMEALLRKFHHEVSTGAYERLPLLDEIDFSVLEDGVDWELIYGYLLTFPEL 367

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +E      +      + L  ++ +LA+ F   + H +   + R        +   R+ L+
Sbjct: 368 MEYTMEQLDQGNCGVHLLVHFVENLAAAFSRFYYHKKVLLQKR---DELMPILYARIYLI 424

Query: 564 HAVASIINSGLNIIGVESPN 583
            AV  ++N+ L ++G+E  +
Sbjct: 425 KAVRQVLNTALAVLGIEPVD 444


>gi|145615990|ref|XP_361096.2| hypothetical protein MGG_03639 [Magnaporthe oryzae 70-15]
 gi|145009774|gb|EDJ94430.1| hypothetical protein MGG_03639 [Magnaporthe oryzae 70-15]
          Length = 163

 Score = 80.7 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            Y          V +EF S N    +H GH R  ++G  ++ L    G+ V +  ++ D 
Sbjct: 27  RYPSGPSSGPQSVLVEFSSPNIAKELHAGHQRSPIIGAYMSDLYEAMGWGVVKINHLGDW 86

Query: 171 GAQINTLALS 180
           G Q + LA+ 
Sbjct: 87  GQQFSLLAVG 96


>gi|307171177|gb|EFN63164.1| Probable arginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 57

 Score = 80.7 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             + +EF S N   P H+GH R  ++G+ +A++ +F    V +  Y+ D G Q   +
Sbjct: 1   KNIIVEFSSPNIAKPFHLGHLRSTIIGNYIANINSFVENNVKKINYLGDWGTQYGLI 57


>gi|198471726|ref|XP_002133822.1| GA23095 [Drosophila pseudoobscura pseudoobscura]
 gi|198146049|gb|EDY72449.1| GA23095 [Drosophila pseudoobscura pseudoobscura]
          Length = 447

 Score = 80.3 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 86/204 (42%), Gaps = 18/204 (8%)

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ +      ++MS   GDF     ++  +G+ +V   +   +++         V+  S
Sbjct: 251 DMILMAMHRNGVRMSSSHGDF---DSLIQRLGAAAVIVDLFEVRHASA----ASVVRNGS 303

Query: 447 KEN-PVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLA 503
             +    Y+ Y  AR  ++ R     +   +   L P + I      D  + +LI  +L 
Sbjct: 304 GGSKGASYILYNSARLETLLRTFNAQVEAGVYQPLPPLDDIDLSLLEDDLDWKLIYGYLL 363

Query: 504 EYPRVIENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +P V+E+     +      + L  Y+  LA++F  ++   +   ++R        +   
Sbjct: 364 PFPEVVESTLNLLQQGQCDVHLLVRYISSLAAIFSRYYRQKKILVQMRDQLM---PVLYA 420

Query: 559 RLQLVHAVASIINSGLNIIGVESP 582
           R+ L+ AV  ++N  L+++G+E  
Sbjct: 421 RVYLIMAVRQVLNVALSLLGIEPV 444


>gi|198471730|ref|XP_002133824.1| GA23097 [Drosophila pseudoobscura pseudoobscura]
 gi|198146051|gb|EDY72451.1| GA23097 [Drosophila pseudoobscura pseudoobscura]
          Length = 447

 Score = 80.3 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 86/204 (42%), Gaps = 18/204 (8%)

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +++ +      ++MS   GDF     ++  +G+ +V   +   +++         V+  S
Sbjct: 251 DMILMAMHRNGVRMSSSHGDF---DSLIQRLGAAAVIVDLFEVRHASA----ASVVRNGS 303

Query: 447 KEN-PVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLA 503
             +    Y+ Y  AR  ++ R     +   +   L P + I      D  + +LI  +L 
Sbjct: 304 GGSKGASYILYNSARLETLLRTFNAQVEAGVYQPLPPLDDIDLSLLEDDLDWKLIYGYLL 363

Query: 504 EYPRVIENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +P V+E+     +      + L  Y+  LA++F  ++   +   ++R        +   
Sbjct: 364 PFPEVVESTLNLLQQGQCDVHLLVRYISSLAAIFSRYYRQKKILVQMRDQLM---PVLYA 420

Query: 559 RLQLVHAVASIINSGLNIIGVESP 582
           R+ L+ AV  ++N  L+++G+E  
Sbjct: 421 RVYLIMAVRQVLNVALSLLGIEPV 444


>gi|294631394|ref|ZP_06709954.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834727|gb|EFF93076.1| arginyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 221

 Score = 80.0 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 63/161 (39%), Gaps = 11/161 (6%)

Query: 6   DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
           + S  +   +       ++     +R+V+  P     G  +TN A+ L+RP G   L +A
Sbjct: 5   ELSRTVLRAVCRAVDAGELNVDPPERVVVTPPGAGGCGDYATNVALQLARPAGQPALRVA 64

Query: 66  ELIVARIKIDPDVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +++   +     +  V + G GF+N+ L    +  ++++  I+  G  YG    G  ++ 
Sbjct: 65  DVLRGHLLNLDGIRDVSVTGPGFLNISLRAGDAGAQRLVEEILRRGQRYGHADPGAPSRA 124

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
                   P         R  V  D +A L+     +  R 
Sbjct: 125 VELRCRREP---------RALVHADVVARLLRAVHGDTVRI 156


>gi|256785195|ref|ZP_05523626.1| arginyl tRNA synthetase [Streptomyces lividans TK24]
          Length = 338

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 11/147 (7%)

Query: 13  NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72
           + ++      ++   +  R V+  P     G  +T  A+ L+RP G  P  +AE++ + +
Sbjct: 3   HAVRRAVDAGELSVAVPTRAVVAPPGPGGCGDYATGIALQLARPAGQTPFRVAEVLRSYL 62

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
                +  V + G GF+N+ L  +     +++ I+  G  YG      G  V +      
Sbjct: 63  VGTDGITDVVLTGPGFLNISLDRAASDVGLVAEILRRGDRYGHADQPDGRVVQLRCP--- 119

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSG 158
                     R  VV +  A L+   G
Sbjct: 120 -------HDLRAVVVAEASARLLRSQG 139



 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           +E  L+  LA++PRV+  A   + P +LA +L  +A       +       L        
Sbjct: 252 AERDLLAALADHPRVLAAAADHRAPDRLARHLVTVADA-----ALLFLPTVLPRGGEKPS 306

Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                RL L  AV +++  GL ++G+++P 
Sbjct: 307 AAHRARLALAEAVGAVLAGGLALLGIDAPE 336


>gi|33329041|gb|AAQ09927.1| CG8097 [Drosophila yakuba]
          Length = 248

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 451 VFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R+ +  +   +   L P   I      D  E QLI  +L  +P +
Sbjct: 110 AAYIMYNLARLETLLRKFSNQVRAGVYAKLPPLEEIDLSVLEDDIEWQLIYGYLFTFPEL 169

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +E+            + L  Y+ +LA VF   +   +   + R            R+ L+
Sbjct: 170 MESLMDQLAKGHCGVHLLLRYIENLAGVFSRFYCLKKILVQKRDQLM---PTLYARIYLI 226

Query: 564 HAVASIINSGLNIIGVESPN 583
            AV  ++N  L ++G+E  +
Sbjct: 227 MAVKQVLNKALAVLGIEPVD 246


>gi|1196933|gb|AAA88595.1| unknown protein [Streptococcus pneumoniae]
          Length = 109

 Score = 79.6 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M      +S L + +  +D +  ++       ++E P++   G ++   A  L++     
Sbjct: 1   MNTKELIASELSSIIDSLDQEAILK-------LLETPKNSEMGDIAFP-AFSLAKVERKA 52

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112
           P  IA  +  ++      + V   G  ++N +L  S +   +   V +  E+
Sbjct: 53  PQMIAAELAEKMN-SQAFEKVVATGP-YVNFFLDKSAISAQVLQAVTTEKEH 102


>gi|349617|gb|AAA17432.1| arginyl-tRNA synthetase [Buchnera aphidicola]
          Length = 131

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 1   MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
           M +       ++  L +I+     E  I+        +    GH   +  M +S  L + 
Sbjct: 1   MNIKYLIKKDIEQALIKINSNYTYEVFIIS------SKKIELGHYQVDNLMKISSRLKIK 54

Query: 61  PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
           P  + + I+  I+       +  +  GFIN+++   +L + L    +S    G   I   
Sbjct: 55  PYKLFQKILILIEKKKIYKKIIFSHPGFINIFIKNEWLSEKLEIPFIS-SRLGVKYIYPK 113

Query: 121 TKVNIEFVSANPTGPMHV 138
             + I++ S N    MHV
Sbjct: 114 KNIVIDYSSPNIAKEMHV 131


>gi|195478893|ref|XP_002100686.1| GE17197 [Drosophila yakuba]
 gi|194188210|gb|EDX01794.1| GE17197 [Drosophila yakuba]
          Length = 446

 Score = 79.2 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 451 VFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R+ +  +   +   L P   I      D  E QLI  +L  +P +
Sbjct: 308 AAYIMYNLARLETLLRKFSNQVRAGVYAKLPPLEEIDLSVLEDDIEWQLIYGYLFTFPEL 367

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +E+            + L  Y+ +LA VF   +   +   + R            R+ L+
Sbjct: 368 MESLMDQLAKGHCGVHLLLRYIENLAGVFSRFYCLKKILVQKRDQLM---PTLYARIYLI 424

Query: 564 HAVASIINSGLNIIGVESPN 583
            AV  ++N  L ++G+E  +
Sbjct: 425 MAVKQVLNKALAVLGIEPVD 444


>gi|115726617|ref|XP_001182746.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115891047|ref|XP_001192714.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 120

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 21/123 (17%)

Query: 478 DLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENA-----------TIAQEPYKLAFYL 525
            L P       +  + +E +L+  H+   P VI  +               E +K+  YL
Sbjct: 4   ALPPVEDTDFSTLKEEAEWKLLFSHILTLPDVILESVGERVTTPQELACKFETHKICRYL 63

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLNIIGVESP 582
             L+     ++       R R +      L      R+ L+ AV  ++ +GL ++ +   
Sbjct: 64  VSLSQDLSTYY------GRFRILVEPRPHLLPTMFARIYLLKAVHQVLGNGLALLKITPL 117

Query: 583 NEM 585
            +M
Sbjct: 118 TQM 120


>gi|72162825|ref|YP_290482.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71916557|gb|AAZ56459.1| similar to Arginyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 416

 Score = 78.0 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 1/137 (0%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-ESEFDTSELQLIVHLAEYPR 507
           NP F ++YA+A   +                  R+   +  +    +   L+  L + P 
Sbjct: 279 NPAFALRYAHAHAHTAVHHWAAQLGLRRLGTRRRHTADEVAALTTPAAEALLGTLFDGPA 338

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A    +P+ L  YL  LA+ +H  W      P        +      RL L  A A
Sbjct: 339 ALRAAARRHQPHILVRYLESLAAAYHEWWESHSVLPGHEGTADTHTTTVAARLDLCAAAA 398

Query: 568 SIINSGLNIIGVESPNE 584
            ++ +GL +IGV +P  
Sbjct: 399 GVLRAGLLLIGVSAPTR 415



 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            S  +++   E      +    L    + R  D   G   +     L+  LG     +A 
Sbjct: 43  LSDLIRHACTEAT---GIPAAHLPDAPLRRSTD-QPGQYLSPLPSRLAGRLGRAARDLAA 98

Query: 67  LIVARIKIDPDVDSVFIAGKGFI 89
            I A ++  P +  V + G GF+
Sbjct: 99  DITAVLRNQPHLTDVQVTGPGFV 121


>gi|297793165|ref|XP_002864467.1| hypothetical protein ARALYDRAFT_918813 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310302|gb|EFH40726.1| hypothetical protein ARALYDRAFT_918813 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 156

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 10/88 (11%)

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
                E  L +H   +   +E       P  L  YL++L S ++  +++ +       V 
Sbjct: 79  LNHADERALGLHSLRFSETVEEVFTNLLPSVLCKYLFNL-SEYYKFYTNFQ-------VT 130

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNII 577
            + ++    RL L  A A ++    +++
Sbjct: 131 GSEQE--TSRLLLCKATAIVMRKCFHLL 156


>gi|260907530|ref|ZP_05915852.1| arginyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 101

 Score = 77.3 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 42/93 (45%)

Query: 7  FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            + L   L  I     ++   +    + R +   HGH  +  A+  +  +  D  ++A 
Sbjct: 6  LQTALARALASIASARGIDSDRIPEPTLRRGQTPRHGHWVSPIALRSAGAVHTDSRSLAV 65

Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99
           I +R+  D  +  V +AG GF+N+ L+PS L 
Sbjct: 66 EIASRLHDDASIAEVEVAGPGFLNITLTPSALA 98


>gi|297559296|ref|YP_003678270.1| DALR anticodon binding domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843744|gb|ADH65764.1| DALR anticodon binding domain protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 361

 Score = 76.9 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 20/136 (14%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           NP F ++YA+A   S+ R + +  P        R    +   FD             P  
Sbjct: 245 NPAFRMRYAHAHATSLVRWSAEGAP-PPAASPDRTAAVRGLLFDG------------PSA 291

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           ++ A   +EP+ L  YL  L S     +   R             + T     L  AVA 
Sbjct: 292 LDTAARREEPHILVRYLEALTSA----YDEWRTC---SAAVPEASERTAADPALPAAVAG 344

Query: 569 IINSGLNIIGVESPNE 584
           ++ +GL ++GV +P  
Sbjct: 345 VLRTGLLLLGVSAPTR 360


>gi|270593977|ref|ZP_06221490.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318369|gb|EFA29515.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 162

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 22/180 (12%)

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           +    V   M+  + +   LN+       + E  ++   PS    I+++L +QG   E  
Sbjct: 1   MWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPS----IVEDLKKQGLAVE-- 54

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349
                        +D  +        GD +   + K DG + Y   D+A  K +YE    
Sbjct: 55  -----DDGALVVYLDEFK-----NKEGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKA 104

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFI 408
           D  +    +  S ++++   +           ++      + L +DG P K   R G  +
Sbjct: 105 DRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFK--TRTGGTV 162


>gi|194894457|ref|XP_001978070.1| GG17890 [Drosophila erecta]
 gi|190649719|gb|EDV46997.1| GG17890 [Drosophila erecta]
          Length = 446

 Score = 75.0 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 10/140 (7%)

Query: 451 VFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R  A  +   +   L P   I      D  + QLI  +L  +P +
Sbjct: 308 AAYILYNSARLETLLRTFANQVKAGVYEKLPPLEEIDLSVLEDDIDWQLIYGYLFTFPEL 367

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           + +            + L  Y+ +LA VF   +   R    L   +         R+ L+
Sbjct: 368 MASLMDQLAQGHCGIHLLLRYIENLAGVFSRFY---RLKKVLVQKRDQLMPTLYARIYLI 424

Query: 564 HAVASIINSGLNIIGVESPN 583
            AV  ++N  L ++G+E  +
Sbjct: 425 MAVRQVLNKALAVLGIEPVD 444


>gi|320592871|gb|EFX05280.1| arginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 285

 Score = 75.0 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 16/169 (9%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
            GF+  Y+       +       G+           KV +EF S N        + R  +
Sbjct: 118 PGFLLPYIRNR--GALYGQETQLGLRDVTAPEKGYNKVVVEFSSPNVPSEFSDMYLRSTI 175

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA----------LYNNDSD 195
           +G  +++L    G EV R  Y+ D G QI  LA+  + RY +           L +  + 
Sbjct: 176 LGSFISNLYESMGCEVVRLNYLGDWGKQIGLLAVG-WQRYGKEDALAEDPVGHLLDIKAH 234

Query: 196 LPEGYYPGVY-LKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAM 241
           + E + P +  +K   +   D  + E     EE   +   ++D    A+
Sbjct: 235 IEEDFRPEIKAIKDAKEANQDAQALEGQGIFEERDAYFKKMEDGDADAV 283


>gi|56758630|gb|AAW27455.1| SJCHGC05541 protein [Schistosoma japonicum]
          Length = 230

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 23/150 (15%)

Query: 453 YVQYAYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDT-SEL---------- 496
            +QY +AR  S+  ++      +     D      +V     E+D   E           
Sbjct: 87  SLQYCHARLCSLESRSISTGLFEFNVCSDGTSKMYDVNHLIHEYDQFIEWPSTTINEKCF 146

Query: 497 -QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            +L   L  +  V+  A    EPY +  Y   L S  +  W H      L  +   NR+ 
Sbjct: 147 MKLADQLCRFSTVLHIAYSKYEPYYILQYALQLTSAVNSAWKH------LPILTCPNRED 200

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++RL +  A  +++ S L ++G++    M
Sbjct: 201 QLLRLYIFIASRNVLASCLRLMGIKPLKAM 230


>gi|169838863|ref|ZP_02872051.1| Arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 149

 Score = 74.6 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 24/171 (14%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +  +   +K        LN+  D +  E  ++   PS    +++ L ++G   E      
Sbjct: 2   EEFIDISLKEYNKVYDRLNVNFDYYFGESFYNDMMPS----VLEELKQKGIAKE------ 51

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMI 353
                   D     + F +  +       + K DGS+ Y  +DLA  K  K E   D  +
Sbjct: 52  --------DQGALVVFFENNRLP---PAIVQKKDGSFLYTTSDLATMKFRKDELKVDEAV 100

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           Y+       + K++  +   + E        +   +   R G  I  S R+
Sbjct: 101 YLTDDRQQNHFKQVFEIGRMLGEPYNYKKTHIVFGI--MRLGNGIIFSSRS 149


>gi|170590230|ref|XP_001899875.1| arginyl aa-trna synthetase protein 2 [Brugia malayi]
 gi|158592507|gb|EDP31105.1| arginyl aa-trna synthetase protein 2, putative [Brugia malayi]
          Length = 111

 Score = 74.2 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           E + +   L+     +P ++  +    EP +L  YL  LA       +       +  + 
Sbjct: 23  ETNEASWLLLKQFKAFPDILYASYQEMEPCRLTVYLLQLA-------NVVGFASSILRIS 75

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
               ++ + RL L+     I++SG+ ++G+E   +M
Sbjct: 76  NEPLEIAIPRLLLLSTARKILDSGMRLLGIEPLKKM 111


>gi|195355501|ref|XP_002044230.1| GM22602 [Drosophila sechellia]
 gi|194129519|gb|EDW51562.1| GM22602 [Drosophila sechellia]
          Length = 178

 Score = 73.4 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 9/128 (7%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSE 433
           K     LL +           ++  R  D +     L+   + +    +++  L      
Sbjct: 22  KPHPAQLLFKRQSEGMKRSLQQLESRGRDKVLTPLELKDAQESLAYGCIKYSDLCHNRIS 81

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              F F K+ E  + N   Y+ Y Y R  SI R + + F +L   L   N++        
Sbjct: 82  DYIFSFDKMLE-DRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIV----LAHE 136

Query: 494 SELQLIVH 501
            E +L   
Sbjct: 137 KEWKLAKT 144


>gi|307207115|gb|EFN84924.1| DALR anticodon-binding domain-containing protein 3 [Harpegnathos
           saltator]
          Length = 408

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 66/174 (37%), Gaps = 13/174 (7%)

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQS---KENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           + F ++     + +  ++   K  +         +V Y  AR   I  +   +    +F 
Sbjct: 238 IIFDLISVAPRQPVVIEYNICKSSTYIRNTKGASFVLYNTARIARIIAKYNMMVLCGEFP 297

Query: 479 LFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATI-----AQEPYKLAFYLYDLASV 531
             P  + +         E +LI + +  YP++++N           P  +  +L +L   
Sbjct: 298 PLPNIDDVDFSQLQQEEEWELIYNFIFGYPQMLQNCLRYKPNFQIYPQVICTFLSELCQK 357

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           F  ++   +         A        RL ++ A+  ++++ L+I+ ++  ++M
Sbjct: 358 FSSYYGKTKILMGGSVHLA---PKMFARLYMLQALQVVLSNALSILDIKPVSQM 408


>gi|317147730|ref|XP_003189944.1| hypothetical protein AOR_1_1692014 [Aspergillus oryzae RIB40]
          Length = 199

 Score = 73.0 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 25/185 (13%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E A KY   +    EE  L + K +   +++K        LNI +D++  E         
Sbjct: 32  ERAIKYFKRMCEGDEEA-LGLWKKFRDLSIIKYQ-ASFARLNIHYDVYAGESQIKNESMK 89

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGS 330
            + ++                   +K  +  ++    +L   T     + +  + K DG+
Sbjct: 90  EVENM-------------------TKEKRVSEVSDGAVLVDLTKYSKKLSKEIVRKKDGT 130

Query: 331 YTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCE 387
             Y + D+     +  E  +DNMIYV+ S    ++ +L  +   +  K    ++  +   
Sbjct: 131 SNYMSRDIGAVFERDEEYHYDNMIYVIASQQDLHMAQLIKIIELIGRKGLADKLEHVNFG 190

Query: 388 LVRLY 392
           LV   
Sbjct: 191 LVHEM 195


>gi|15615600|ref|NP_243904.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|12585349|sp|Q9K8G8|SYV_BACHD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10175660|dbj|BAB06757.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 880

 Score = 72.6 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 93/331 (28%), Gaps = 67/331 (20%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +        + G  +            I     N TG +H+GH     + D L+ L 
Sbjct: 14  PQDIESKWYEYWIEGKFFEATSDETKKPYTIVIPPPNVTGKLHLGHAWDTALQDILSRLK 73

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY+             ++   ++   + +  L                         
Sbjct: 74  RMQGYDTL-------WLPGMDHAGIATQAKVEAKL------------------------- 101

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +      +   E ++    ++  +     IR     L +  D          G    +R
Sbjct: 102 REEGKSRYDLGREAFVEKTWEWK-EEYADFIRQQWAKLGLSLDYSRERFTLDEGLSKAVR 160

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           ++   L  +G +Y G         T+    D + +          +  PL   DG+    
Sbjct: 161 EVFVKLYEKGLIYRGEYIINWDPVTKTALSDIEVIYKDVQGYFYHMKYPLADGDGA---- 216

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
              +     + E        ++G             A AV  +  +   L+ ++V+L   
Sbjct: 217 ---IEVATTRPET-------MLGD-----------TAVAVHPEDERYQHLIGKMVKLPIT 255

Query: 395 GMPIKMSKRAGDFITLRHVVD-EVGSDSVRF 424
           G  I         I     VD E GS +V+ 
Sbjct: 256 GREI--------PIVADDYVDMEFGSGAVKI 278



 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 106/309 (34%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G VY G    P+     K D D     F S      TM   D + P  K      Y+
Sbjct: 424 KETGEVYVG-HEAPQDIDNWKQDEDVLDTWFSSALWPFSTMGWPDEEAPDYKR-----YY 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           + D          G+D +I+         V R+       + +    +VL+  LV   RD
Sbjct: 478 STDA------LVTGYD-IIFFW-------VSRMIFQGLEFTGQPPFKDVLIHGLV---RD 520

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    V+D+ G+D++RF +    +    L F + KV+          
Sbjct: 521 AEGQKMSKSLGNGVDPMEVIDKYGADALRFFLATGSSPGNDLRFYWEKVESTWNFG---- 576

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +  R     F  ++ D    + I    E   ++  ++  L E    +    
Sbjct: 577 -----NKIWNASR-----FALMNMDGMSYDEIDLTGEKSIADQWILTRLQETIETVTRLI 626

Query: 514 IAQEPYKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            A E  ++  +LY     DL       +    E  +L     +       R  L +    
Sbjct: 627 DAYEFGEVGRHLYNFIWDDLCD----WY---IEMAKLPLYGEDEVAKKTTRSVLAY---- 675

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 676 VLDQTMRLL 684


>gi|307181849|gb|EFN69289.1| DALR anticodon-binding domain-containing protein 3 [Camponotus
           floridanus]
          Length = 441

 Score = 72.3 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 68/175 (38%), Gaps = 19/175 (10%)

Query: 424 FMMLWRKNSELLDF---DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           F ++  K S  +     +F   K  +      +V Y  AR  +I  + K+     ++   
Sbjct: 273 FELMAVKPSRSVVIGNNNFQDNKSSTNNRGAAFVLYNTARIATIIMKYKEKVSCGNYPSL 332

Query: 481 PR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATI---AQE--PYKLAFYLYDLASVFH 533
           P    +      +  E +LI + +  YP++I +           P  L  +L  L   F 
Sbjct: 333 PNIENVDFSQLHEEDEWELIYNFIFGYPQMINDCLKCETNFCIYPQVLCLFLSRLCQKFS 392

Query: 534 GHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLNIIGVESPNEM 585
            ++       R+R +      L      RL ++H++  ++ + L+I+G+   + M
Sbjct: 393 IYY------RRIRILTEGGDHLISKMFARLYMLHSLQIVLENALDILGITPVSRM 441


>gi|124506827|ref|XP_001352011.1| arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23505039|emb|CAD51822.1| arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 943

 Score = 71.9 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 141/421 (33%), Gaps = 64/421 (15%)

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           I   AL   ++  + LY       +     + L +   E      + + N  +++  P++
Sbjct: 417 IKLDALEFSYKLAKRLYLKSDLFKKFCKKTLSLMYKNDEKIMTVWNIICNITKKENEPVL 476

Query: 234 KDYSVQAMMK-----------------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           K + ++ +++                 I +  +  LN +  + +   D  +   S     
Sbjct: 477 KRFKIKRLVEKGEHYYVKYASKIINMMINKKIIFNLNNKLCVLLKPKDMEKMCTSKNYKN 536

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            +N+ +   +Y  I+ P  S        D        + +         K+D +YTY A 
Sbjct: 537 KENILKSNDIYYDIIQPDDSLYEYIKKND-------ISYLKKYYTILTFKNDVAYTYAAI 589

Query: 337 DLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRD 394
           DLA    +      + +IYV+  +   +  ++ ++A  ++  K  +  + +     L +D
Sbjct: 590 DLAAIYYRVTYEHVNKIIYVVDENQKNHFAQVFSIAKYLNLIKPYVECICINYGYILNQD 649

Query: 395 GMPIKMS-------------KRAGDFITLRHVV--------------------DEVGSDS 421
              IK               K   +       +                    D++   S
Sbjct: 650 KKKIKTQNFSNNIFVKDFFIKYKQNVENFNDGLIHLHNKNYFINNKYCTTKFYDQLFFSS 709

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
             +  +  KNS+    +   ++  ++E    Y+   Y     I    K+   + +  +  
Sbjct: 710 TIYSYISIKNSKRQPVN-NLIQNMNRE--YLYIIDTYNITLYILNMFKNNNNNNNNQISD 766

Query: 482 RNVIPQESEFDTSE--LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
            + +    EF   +    L++ + ++  +I+         KL  Y+Y L+   H  + + 
Sbjct: 767 FSFLFSNKEFQPEQNVKNLLLDIIKFNYIIQKCAHDFSIEKLCSYIYKLSQKMHTLYYNN 826

Query: 540 R 540
            
Sbjct: 827 N 827



 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 73  KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----EYGRNLIGKGTKVNIEFV 128
           +    +D++ I+  G +N+ ++ + L + + +     I            K   V ++F 
Sbjct: 197 ECSDIIDNLHISENGILNIRINTNSLMEKIRNFYNMNILKSNNEKEINKKKKDIVLLDFC 256

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           S N    +H+GH +   +G +L++L  F  Y++    +I D    I  + 
Sbjct: 257 SVNMCKHIHMGHLKSIFLGYSLSNLFHFCNYQIKNRSHIGDWNLNIALVI 306


>gi|258614374|ref|ZP_05712144.1| arginyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 65

 Score = 71.1 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              EP  +A +   LA  F+ +++H +           + +    RL LV+AV  ++   
Sbjct: 2   EKYEPSVIAKHAIKLAQAFNKYYAHTKIL--------ADDEQKEARLALVYAVTVLLKED 53

Query: 574 LNIIGVESPNEM 585
           L ++G+ +P++M
Sbjct: 54  LRLLGLHAPDKM 65


>gi|313219484|emb|CBY30408.1| unnamed protein product [Oikopleura dioica]
          Length = 357

 Score = 71.1 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 106/365 (29%), Gaps = 51/365 (13%)

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R   +   +  D +  E D    D S I  ++ N        E +    K         
Sbjct: 6   YRKQYELFGVNFDHWERESDVS--DASSILKLLQNAGNNFAKDEDVQLELKKFNPSWALG 63

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363
             K    +++ V       +        Y + D+     + E    D++ Y+       +
Sbjct: 64  KNKNSRKKASKVQFHQLSTINCC--RTIYLSRDILTAIKRSELYSADSLCYITDISQKDH 121

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +L +             +           G    MS RAG  ++L  V+DE       
Sbjct: 122 FHKLCSALDYFGYTDIAAKIEFVGF------GKLEGMSTRAGTGLSLESVIDEAVELQAE 175

Query: 424 FMMLWRKN------------------------------SELLDFDFCKVKEQSKENPVFY 453
            M    K                                   D  F        +N   Y
Sbjct: 176 MMEKHGKTTYARHNFDQLDEITKKKHAAWFVAASVFSSKRQKDLKFNWQLHLKNDN-GMY 234

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +Q  Y++ +++  + +    +   D    +    ES ++    +L+   A Y +  + A 
Sbjct: 235 LQRTYSKIKNLLSKVERSRLEESVDDADFSSFIYESHWN----ELLQQSAAYSKARQKAI 290

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              + + L  +   L  + H            +++   +RK    R+ L   V  I+   
Sbjct: 291 DELDGFILLQFGLRLGQLAHK-----VIFKDEKWILIEDRKSLHERIMLFDCVLMIVEDL 345

Query: 574 LNIIG 578
           L ++G
Sbjct: 346 LKLLG 350


>gi|271963174|ref|YP_003337370.1| hypothetical protein Sros_1636 [Streptosporangium roseum DSM 43021]
 gi|270506349|gb|ACZ84627.1| hypothetical protein Sros_1636 [Streptosporangium roseum DSM 43021]
          Length = 218

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 32/145 (22%)

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NP F V++A+ R  ++ R A D+    DF                   +L+     + R
Sbjct: 97  DNPGFIVRFAHVRAVAVQRWAADLGVGGDFRP-----------------ELLA--GRWDR 137

Query: 508 VIENATIAQEPY--KL------AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
            +  +    E +  ++      A Y   LA  +H         P L         L   R
Sbjct: 138 AVLRSLA--EVHGRRVSRDPGWAAYTEQLARAYH---DAFERAPALPAGDEEPSALHAAR 192

Query: 560 LQLVHAVASIINSGLNIIGVESPNE 584
           ++L  AV  ++  GL  +G  +P+ 
Sbjct: 193 VRLARAVRDVLAEGLAALGETAPDR 217


>gi|56964386|ref|YP_176117.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822070|sp|Q5WEQ4|SYV_BACSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56910629|dbj|BAD65156.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 880

 Score = 69.9 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 104/331 (31%), Gaps = 65/331 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS   K   +  + G  +           +I     N TG +H+GH   A + D LA  
Sbjct: 12  DPSATEKKWYTYWLKGKFFEATGDPDKQPYSIVIPPPNVTGKLHLGHAWDATIQDILART 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEGKLRE----------QGISKYDLGREA 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             + S E  +                   K IR+    + I  D         +G    +
Sbjct: 115 FLEKSWEWKD----------------EYAKFIREQWAKVGISVDYSRERFTLDQGLSDAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           +++  +L  +G +Y G         T+    D + +          +  PL  SDGS + 
Sbjct: 159 KEVFVSLYNKGLIYRGEYIINWDPQTKTALSDIEVIYKDVQGAFYHMSYPL--SDGSGS- 215

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV     +   L+ ++V+L  
Sbjct: 216 ----IEIATTRPET-------MLGD-----------TAVAVHPDDERYQHLIGKMVKLPI 253

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            G  I +       I   +V  E GS +V+ 
Sbjct: 254 VGREIPI-------IADDYVDREFGSGAVKI 277



 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 80/221 (36%), Gaps = 42/221 (19%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+     A + ++   +VL+  L+   RD    KMSK  G+ +  + V+D+ G+DS+
Sbjct: 492 WVSRMIFQGKAFTGQRPFKDVLIHGLI---RDAEGRKMSKSLGNGVDPQEVIDKYGADSL 548

Query: 423 RFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           RF +         L F + KV+                +  +  R     F  ++ D F 
Sbjct: 549 RFFLATGSTPGNDLRFYWEKVESTWNFG---------NKIWNASR-----FALMNMDGFS 594

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541
            + I    E   ++  ++  L      +E+ T   +        Y+           GR 
Sbjct: 595 YSDIDINQEKSIADKWILTRLQ---ETVESVTRLID-------AYE-------FGEAGRV 637

Query: 542 NPRLRFVQANNRKLTMMRLQLV-------HAVASIINSGLN 575
                +    +  + M +L L         A  S++   L+
Sbjct: 638 LYSFIWDDVCDWYIEMAKLALYGENEQAKQATRSVLAHVLD 678


>gi|70921264|ref|XP_733988.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506300|emb|CAH79556.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 198

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 71/186 (38%), Gaps = 16/186 (8%)

Query: 9   SRLKNYLKEIDCKIKVEKK--ILDRIVIERPRDCAHGHLSTNAAMILSR--PLGL----- 59
             + N +K +  KIK  +   I  + ++E  +        +   M + R  P G+     
Sbjct: 7   EIINNAIKNVAIKIKKNENLVIPKQYLLEDNKLYDDYEYQSGIVMYIDRDIPDGIPTNVD 66

Query: 60  -DPLT-IAELIVARIKIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSI---VVSGIEY 112
            +    + + I+  +K +     D + ++  G +N+ +   Y++         +    + 
Sbjct: 67  ENKREDLRQKIIEDLKNECPNIIDDILLSSNGILNIRVKEEYIKTKFYEFHNQLNKNKQN 126

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
                 +   V +++   N    MHVGH +   +G  L+++  +  + V    +I +  A
Sbjct: 127 CETKNDEKQNVVLDYCGVNMAKHMHVGHLKSLFLGHALSNVFDYFNFNVNSRNHIGNWNA 186

Query: 173 QINTLA 178
            I  + 
Sbjct: 187 NIAMVI 192


>gi|156097282|ref|XP_001614674.1| arginyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148803548|gb|EDL44947.1| arginyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 977

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 23/206 (11%)

Query: 3   LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62
           L A  + +L+N  K+I     V  K+    ++E  +        ++  + L   LG    
Sbjct: 91  LHAALNKQLQNVAKQILRDENV--KLPKHCLLEENKLFDQYEYQSSVILFLEHSLGKG-N 147

Query: 63  TIAELIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            +   I+  ++      +DS+ ++  G +N+ ++ +++ +       +G  +      +G
Sbjct: 148 DVRSEILRILRGTCADLIDSLHLSPNGILNIRVADAFVVREFLQFYRAGGAHMGRAAVEG 207

Query: 121 TKVN-----------------IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
              N                 ++F   N    MH+GH +  ++G+ L+++     Y V  
Sbjct: 208 GTNNNFQKMETPQSGDRHTVLLDFCGVNMAKNMHMGHLKSLLLGNALSNIFRSLNYSVKC 267

Query: 164 EYYINDAGAQINTLALSVFWRYQQAL 189
             +I D    +  + LS F  + + +
Sbjct: 268 RSHIGDWNMNMAMV-LSFFVMFPREV 292



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 48/117 (41%), Gaps = 2/117 (1%)

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS 361
           ++  +     +  +  +     L++D ++TY A DLA    +      + +IYV+  +  
Sbjct: 549 ELREQARRNDADQLKKNFTLLTLQNDVAFTYAAIDLAAIHYRVTHEKANKIIYVVDENQR 608

Query: 362 GYVKRLEAVAAAVSEKKAQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            +  ++ A+A        Q+  V L     L  +   +K        ++++ +++ V
Sbjct: 609 KHFMQIFAIAKFAHILPDQVECVCLNYGFVLNSENRKMKTKDLCKKNVSVKEMLESV 665



 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 53/179 (29%), Gaps = 15/179 (8%)

Query: 356 MGSDHSG--YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            G  H+G  +            EK         +       G      K  G+  T    
Sbjct: 684 TGEKHTGEKHTGEKHTGEKHTGEKHTGEKHTGEKHTGEKHTGEKHTGEKHTGEKHTGEKH 743

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY--AYARCRSIFRQAKDI 471
            +     S+ +  L  KN     +    +          Y+     Y    SI  +AK  
Sbjct: 744 RESFLLSSLIYSYLAVKN-----YKRQVIGNILNNFHAEYLLIINCYNEVSSILGKAKK- 797

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530
             D    L  R  I  E        +L++H+  +  + E  T +    +L  +L+ L+ 
Sbjct: 798 -GDYSSLLEKRKNIQIEKNL----KKLMLHMMRFNNITEEVTRSYSVDRLCSFLFTLSQ 851


>gi|229543663|ref|ZP_04432723.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328083|gb|EEN93758.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 881

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 76/239 (31%), Gaps = 35/239 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      V+G  +      +     I     N TG +H+GH     + D L  +
Sbjct: 13  DPQAVEKGRYEWWVNGKFFEAKGDPEKKPYTIVIPPPNVTGKLHLGHAWDTALQDILTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLREE----------GKSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W    K    Q     IR     L +  D          G    +
Sbjct: 115 ---------KFTEEAW--KWKAEYAQ----FIRKQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +++  +L ++G +Y G         T+   +   +++++  + G         SDGS T
Sbjct: 160 KEVFVSLYKKGLIYRGEYIINWDPETKTA-LSDIEVVYK-EVQGAFYHLAYPLSDGSGT 216



 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 92/243 (37%), Gaps = 40/243 (16%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+         V R+     A + K+   +VL+  LV   RD    K
Sbjct: 477 YPTDTLVTGYD-IIFFW-------VSRMIFQGLAFTGKRPFKDVLIHGLV---RDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +       + L F + KV+        F  +   
Sbjct: 526 MSKSLGNGVDPMEVIDKYGADSLRYFLTTGSAPGQDLRFSYEKVEAVWN----FANKIWN 581

Query: 459 ARCRSIFR----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           A   ++      + +++    +  +  + ++ + +E   +  +L     E+      A  
Sbjct: 582 ASRFALMNMNGLKYEEMDLSGEKSVADKWILTRLNETIETVTKLADK-YEFGE----AGR 636

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           A        +++D    F   +    E  +L     +       R  L +    ++++ +
Sbjct: 637 ALY-----NFIWD---DFCDWY---IEMAKLPLYSEDEAAKKTTRSVLAY----VLDNTM 681

Query: 575 NII 577
            ++
Sbjct: 682 RLL 684


>gi|260800087|ref|XP_002594968.1| hypothetical protein BRAFLDRAFT_103698 [Branchiostoma floridae]
 gi|229280206|gb|EEN50979.1| hypothetical protein BRAFLDRAFT_103698 [Branchiostoma floridae]
          Length = 531

 Score = 69.2 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 74/189 (39%), Gaps = 19/189 (10%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP-----VFYVQYAYARCRSIF 465
              +  + + +++F +L+     +   D     ++S E P       ++ Y  AR  ++F
Sbjct: 348 EDTITAMTAAAIKFELLFTSCQNIAKLDLSI--KESGEGPQDNKGGAFILYNCARLATLF 405

Query: 466 RQAKDIFPDLDFDLFP--RNVIPQESEFDTSELQLIVHLAEYPRVIE----NATIAQE-- 517
           +  ++      +   P   +V     + +     L  ++  YP +++         +   
Sbjct: 406 KHYQEDIRAGVYPDLPDISSVDFSLLKEEEEWELLFNYILPYPDLVQGTVVEVNKTRAKI 465

Query: 518 -PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             +++  +L  L+     ++   R     R        +   RL L+  V  ++++GL++
Sbjct: 466 LTHQVCSFLIALSRDLSSYYRRVRVLLEPRAHL---LPVMFARLHLLKGVQQVMHNGLSL 522

Query: 577 IGVESPNEM 585
           +G++   +M
Sbjct: 523 LGIQPLAQM 531


>gi|311031449|ref|ZP_07709539.1| valyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 882

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 66/212 (31%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      + G  +        T   I     N TG +H+GH     + D +  +
Sbjct: 13  DPQTIEKNRYQYWLDGRFFEATNDQDKTPYTIVIPPPNVTGRLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++V            ++   ++   +  + L N           G+    +G+E 
Sbjct: 73  KRMQGFDVL-------WLPGMDHAGIATQAKVDEKLRN----------QGINRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W    KD       K IR+    L +  D          G    +
Sbjct: 115 ---------KFMEEAW--KWKD----EYAKHIREQWSKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            ++  +L ++G +Y G         T+    D
Sbjct: 160 NEVFVSLYKKGLIYRGEYIINWDPATKTALSD 191



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 34/233 (14%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   S        +        E+  + +VL+  LV   RD    KMSK  G+
Sbjct: 484 TGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRKMSKSLGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            +    V+++ G+DS+R+ +    +  + L F + KV+                +  +  
Sbjct: 533 GVDPMEVIEKYGADSLRYFLSTGSSPGQDLRFSYEKVESTWNF---------ANKIWNAS 583

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R A     D+ F+      I    E   ++  ++  L E    +       E  ++   L
Sbjct: 584 RFALMNMDDMKFE-----DIDLSGEKSVADKWILTRLNETIETVTKLAEKYEFGEVGRAL 638

Query: 526 YD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           Y+ +   F   +    E  ++     +       R  L +    ++++ + ++
Sbjct: 639 YNFIWDDFCDWY---IEMAKIPLYSEDEAAKKTTRSILAY----VLDNTMRLL 684


>gi|118097012|ref|XP_414397.2| PREDICTED: similar to DALR anticodon binding domain containing 3
           [Gallus gallus]
          Length = 488

 Score = 68.8 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 22/182 (12%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            V+D +   ++RF ML   +   +  D       +K      +V Y  AR  ++F   + 
Sbjct: 305 EVIDILTVAAIRFEMLSTAHRSQITLDLEDSSISTKGTKSGAFVMYNCARLATLFDTYQR 364

Query: 471 IFPDLDFD-LFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPYK-------- 520
                 +  L P + +      +  E  L+  +L  +P V++ A     P K        
Sbjct: 365 AVERGTYPPLPPASELNFSCLREEGEWLLLFSYLLPFPEVLQQAAQLPPPSKGLRITANT 424

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L      RL+L+ AV  + +S L 
Sbjct: 425 EAVCKFLIQLSMDFSSYYN------RVHILGEPFPHLFDQMFARLRLLGAVRDMFHSALA 478

Query: 576 II 577
            +
Sbjct: 479 TL 480


>gi|194221331|ref|XP_001498551.2| PREDICTED: DALR anticodon binding domain containing 3 [Equus
           caballus]
          Length = 542

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 16/179 (8%)

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKDIFPDL 475
           +   S++F ML       L          +K      +V Y  AR  ++F   K      
Sbjct: 364 LAVASIKFEMLSTAPQSQLLLALADSSISTKGTKSGTFVMYNCARLATLFEGYKRNMEQG 423

Query: 476 DFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQ--EP--YK------LAF 523
            +  FP  N +      D  E  L+   +  +P ++          P  +       +  
Sbjct: 424 LYPTFPAVNSLDFSLLQDEGEWLLLFNSVLPFPDLLSQTAALACTAPGLHITAHTEMVCK 483

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
           +L  L+  F  +++        R    +       RLQL+ AV  ++++GL ++G+   
Sbjct: 484 FLVQLSMDFSSYYNRVHILGEPRPHLFD---QMFARLQLLRAVRKVLHTGLAMLGLPPL 539


>gi|296268862|ref|YP_003651494.1| DALR anticodon binding domain-containing protein [Thermobispora
           bispora DSM 43833]
 gi|296091649|gb|ADG87601.1| DALR anticodon binding domain protein [Thermobispora bispora DSM
           43833]
          Length = 222

 Score = 68.4 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +NP F V+YA+AR  ++ R A       D    P +    E   D  +  ++  LAE P 
Sbjct: 103 DNPGFVVRYAHARAAAVERWA-------DALGVPWDGFRPELLADPHDRAVLRLLAEPPS 155

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
               A     P + A Y   LA  +H         P +       R++   RL L  AV 
Sbjct: 156 --RGAGRD--P-RWAGYAERLALAYH---DAHERAPAVPRGDEPVREVHTARLWLARAVR 207

Query: 568 SIINSGLN 575
           +++++ L 
Sbjct: 208 AVLSAVLA 215


>gi|326928033|ref|XP_003210189.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           [Meleagris gallopavo]
          Length = 412

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 22/182 (12%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            V+D +   ++RF ML   +   +          +K      +V Y  AR  ++F   + 
Sbjct: 229 EVIDILTVAAIRFEMLSTAHRSQVXXXLEDSSISTKGTKSGAFVMYNCARLATLFDSYQR 288

Query: 471 IFPDLDFD-LFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPYK-------- 520
                 +  L P + +      +  E  L+  +L  +P V++ A     P K        
Sbjct: 289 AVERGTYPPLPPASELNFSCLREEGEWLLLFSYLLPFPEVLQQAAQLPPPSKGLRITANT 348

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L      RLQL+ AV  + +S L 
Sbjct: 349 EAVCKFLIQLSMDFSSYYN------RVHILGEPFPHLFDQMFARLQLLGAVRDVFHSALA 402

Query: 576 II 577
            +
Sbjct: 403 TL 404


>gi|149181773|ref|ZP_01860264.1| valyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850514|gb|EDL64673.1| valyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 881

 Score = 68.0 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        + G  +      +     I     N TG +H+GH     + D L  +
Sbjct: 13  DPQAIESGRYQWWLDGKFFEAANDKEKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L +  +                   
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRSEGTT------------------ 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y      F EE W         +   K IR     L +  D          G    +
Sbjct: 108 --RYDLGREKFLEETWK------WKEEYAKHIRAQWSKLGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++   L  +G +Y G         T+    D
Sbjct: 160 KEVFVTLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 39/206 (18%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
            N +L   +    DG   KMSK  G+ +    V+D+ G+D++R+M+              
Sbjct: 509 FNDVLIHGLVRAEDGR--KMSKSLGNGVDPMEVIDQYGADALRYML-------------- 552

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFR-----QAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                +  +P   ++Y+  +  S++           F  ++ D      I    E   ++
Sbjct: 553 ----STGSSPGQDLRYSTEKVESVWNFANKIWNASRFALMNMDGLKYEEIDLTGEKSAAD 608

Query: 496 LQLIVHLAEYPRVIENATIAQEP----YKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             ++  L E    +       E       L  +++D    F   +    E  +L     +
Sbjct: 609 KWILTRLNETIETVTKLADRYEFGEVGRILYNFIWD---DFCDWY---IEMAKLPLYGED 662

Query: 552 NRKLTMMRLQLVHAVASIINSGLNII 577
                  R  L +    ++++ + ++
Sbjct: 663 EAAKKTTRSILAY----VLDNTMRLL 684


>gi|290558932|gb|EFD92319.1| DALR anticodon binding domain protein [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 129

 Score = 68.0 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 23/131 (17%)

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
           ++ FD        K +   Y+ Y+Y+R  S+ ++A  I                + EF T
Sbjct: 1   MVVFDINDATSL-KGDSGLYINYSYSRALSVLKKAGKIDSG-------------KIEFHT 46

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
            E   I  L  +   +ENA I   P  +  YL+ +   F+  +   R    L        
Sbjct: 47  EESSFIKELFFWEENLENAVINLRPNLICDYLHRVCDYFNSFYEKNRVIGDLN------- 99

Query: 554 KLTMMRLQLVH 564
                R+ ++ 
Sbjct: 100 --ETARIAIIK 108


>gi|295399400|ref|ZP_06809382.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110041|ref|YP_003988357.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978866|gb|EFG54462.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215142|gb|ADP73746.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 880

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHKAVEANRYQWWLDGKFFEATGDPDKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRK----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYANHIRQQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R++  +L R+G +Y G         T+    D + +          +  PL  +DGS
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHMRYPL--ADGS 214



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 75/223 (33%), Gaps = 36/223 (16%)

Query: 363 YVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           +      +   +    K+   +VL+  LV   RD    KMSK  G+ +    V+D+ G+D
Sbjct: 490 FFWVSRMIFQGLEFTGKRPFKDVLIHGLV---RDAQGRKMSKSLGNGVDPMDVIDQYGAD 546

Query: 421 SVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           S+RF +    +  + L F   KV+                +  +  R A      + +D 
Sbjct: 547 SLRFFLATGSSPGQDLRFSTEKVEATWNF---------ANKIWNASRFALMNMGGMTYDQ 597

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY-----DLASVFHG 534
              +     ++       ++  L E    +       E  ++   LY     DL      
Sbjct: 598 LDLSGEKTVADHW-----ILTRLNETIETVTKLAEKYEFGEVGRVLYNFIWDDLCD---- 648

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            +    E  +L     +       R  L +    +++  + ++
Sbjct: 649 WY---IEMAKLPLYGDDEEAKKTTRSVLAY----VLDHTMRLL 684


>gi|229918362|ref|YP_002887008.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469791|gb|ACQ71563.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 883

 Score = 67.6 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS          +    +  +         I     N TG +H+GH     + D L  L
Sbjct: 15  DPSATESKWYDYWLENDVFKADEDDSKQPYTIVIPPPNVTGKLHLGHAWDTTLQDLLTRL 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +Q L                        
Sbjct: 75  KRMQGYDVL-------WLPGMDHAGIATQAKVEQKL------------------------ 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++      K IRD    L +  D          G    +
Sbjct: 104 -REEGVMRYDLGREKFLEKTWEWK-DEYAKTIRDQWSKLGLGLDYSRERFTLDEGLSKAV 161

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++   L  +G +Y G          +    D
Sbjct: 162 QEVFVRLYEKGLIYRGEYIVNWDPAQKTAVSD 193


>gi|76162032|gb|ABA40768.1| SJCHGC01046 protein [Schistosoma japonicum]
          Length = 69

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+++  +++   +  I++ G+      I     V I+  S N    MHVGH R  ++G++
Sbjct: 2   NIWVQRNFISTEVRKILLHGVTPP--FIPNKYSVIIDMSSPNIAKEMHVGHLRSTIIGES 59

Query: 150 LASLMAFSG 158
           ++ L++F G
Sbjct: 60  ISRLLSFLG 68


>gi|169836921|ref|ZP_02870109.1| Arginyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 83

 Score = 67.3 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           + +  +  + F + KV    + N   Y+QY Y R  SIFR+ K+   +++ +    +   
Sbjct: 1   MSQNRTSDITFTWDKVLSF-EGNTGPYLQYTYVRIMSIFRKLKEENIEVENNDIILD--- 56

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIA 515
              + +  E +L V L  +P+ +  A   
Sbjct: 57  ---DMNGIERELAVELLRFPQAVVKAYET 82


>gi|239827910|ref|YP_002950534.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808203|gb|ACS25268.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 880

 Score = 67.3 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHKAVEANRYQWWLDGKFFEATGDPDKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRK----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYASHIRQQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++  +L R+G +Y G         T+    D
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPVTKTALSD 191



 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 102/308 (33%), Gaps = 58/308 (18%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y    PP       Q  D+        L   STM   D + P  K      Y+ 
Sbjct: 424 KETGEIYVDHEPPADIENWEQDPDVLDTWFSSALWPFSTMGWPDTEAPDYKR-----YYP 478

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+         G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 479 TDV------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDA 521

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ +    V+D+ G+DS+RF +    +  + L F   KV+           
Sbjct: 522 QGRKMSKSLGNGVDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWNF------ 575

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
                +  +  R A      + +D    +     ++       ++  L E    +     
Sbjct: 576 ---ANKIWNASRFALMNMGGMTYDQLDLSGEKTVADHW-----ILTRLNETIETVTKLAE 627

Query: 515 AQEPYKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             E  ++   LY     DL       +    E  +L     +       R  L +    +
Sbjct: 628 KYEFGEVGRVLYNFIWDDLCD----WY---IEMAKLPLYGDDEAAKKTTRSVLAY----V 676

Query: 570 INSGLNII 577
           +++ + ++
Sbjct: 677 LDNTMRLL 684


>gi|319651731|ref|ZP_08005857.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396550|gb|EFV77262.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 881

 Score = 66.9 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 67/359 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      + G  +            I     N TG +H+GH     + D L  +
Sbjct: 13  DPQAIEKGRYDWWLEGKFFEAKDDETKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L N+          G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRND----------GKSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  E   + EE                 IR     L +  D          G    +
Sbjct: 115 --KFVEETWKWKEE-------------YASHIRQQWSKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++  +L  +G +Y G        +T+   +   +++++         R          Y
Sbjct: 160 REVFVSLYNKGLIYRGEYIINWDPSTKTA-LSDIEVIYKDVQGAFYHMR----------Y 208

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              D +          + M+                 A AV  +  +   L+ + V+L  
Sbjct: 209 PLTDGSGHIEIATTRPETML--------------GDTAVAVHPEDDRYKHLIGKTVKLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENP 450
            G  I +       +   +V  + GS +V+       N   +    +  ++   +++  
Sbjct: 255 TGREIPI-------VADDYVEMDFGSGAVKITPAHDPNDFEIGNRHNLERILVMNEDGT 306



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 105/310 (33%), Gaps = 62/310 (20%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDR--------KQLLFRSTMVGDDVDRPLLKSDGSYT 332
              G V+ G   P   +  +  + D+          L   STM   D D     SD    
Sbjct: 424 KETGEVFVGHEAP---EDIENWEQDKDVLDTWFSSALWPFSTMGWPDTD----SSDFKRY 476

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y  A L         G+D +I+   S        +        E+  Q +VL+  LV   
Sbjct: 477 YPTAALVT-------GYD-IIFFWVSR------MIFQGLEFTGERPFQ-DVLIHGLV--- 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F   KV+        
Sbjct: 519 RDSQGRKMSKSLGNGVDPMDVIDQYGADSLRYFLSTGSSPGQDLRFSMEKVEATWNF--- 575

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                   +  +  R     F  ++ D      I    E   ++  ++  L E    +  
Sbjct: 576 ------ANKIWNASR-----FALMNMDGLTYEEIDLSGEKSVADKWILTRLNETIETVTR 624

Query: 512 ATIAQEP----YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +   E       L  +++D    F   +    E  +L     +       R  L +   
Sbjct: 625 LSDRYEFGEVGRVLYNFIWD---DFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY--- 675

Query: 568 SIINSGLNII 577
            ++++ + ++
Sbjct: 676 -VLDNTMRLL 684


>gi|52081291|ref|YP_080082.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786670|ref|YP_092499.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647204|ref|ZP_08001426.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825234|sp|Q65GK8|SYV_BACLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52004502|gb|AAU24444.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349172|gb|AAU41806.1| ValS [Bacillus licheniformis ATCC 14580]
 gi|317390551|gb|EFV71356.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 880

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + K      V+G  +      +     +     N TG +H+GH   + + D +  +
Sbjct: 13  DPSAVEKDRYDYWVNGKFFEAKNDPEKEPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     L +  D          G    +
Sbjct: 102 -REEGKTRYDLGREKFLEETWNWK-EEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R++   L  +G +Y G         T+   +   +++++         R  LK DGS
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTA-LSDIEVIYKDVQGAFYHMRYPLK-DGS 214



 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 104/307 (33%), Gaps = 56/307 (18%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDR--------KQLLFRSTMVGDDVDRPLLKSDGSYT 332
              G +Y G+  P   +  +  + D+          L   STM   D+D    + D    
Sbjct: 424 KETGEIYVGVEAP---EDAENWEQDKDVLDTWFSSALWPFSTMGWPDID----EEDFKRY 476

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y    L         G+D +I+   S        +        E+  +  ++      L 
Sbjct: 477 YPTNVLVT-------GYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LI 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+        
Sbjct: 519 RDDQGRKMSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSFEKVESTWNF--- 575

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                   +  +  R     F  ++ D      +    E   ++  ++  L E    +  
Sbjct: 576 ------ANKIWNASR-----FALMNMDGMTYEELDLSGEKSVADKWILTRLNETIETVTQ 624

Query: 512 ATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                E  ++  +LY+ +   F   +    E  +L     +       R  L +    ++
Sbjct: 625 LADKYEFGEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VL 677

Query: 571 NSGLNII 577
           +  + ++
Sbjct: 678 DQTMRLL 684


>gi|152973886|ref|YP_001373403.1| methionyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022638|gb|ABS20408.1| methionyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 659

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 117/349 (33%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKKAEELQVT------- 69

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +   + D ++   +++ +  ++   +D   + + KI +  +  
Sbjct: 70  ----------PQAYVDDIVAGIKDLWNKMDISYDD--FIRTTEDRHKEVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G V   +             +      F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMENGKV---VGGKSPDSGHAVELVREASYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF----- 349
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGN 231

Query: 350 -DNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G++++  Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENAEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|255327092|ref|ZP_05368168.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296309|gb|EET75650.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 514

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 136/426 (31%), Gaps = 65/426 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + + NP    H+GH    +  D LA      G++V      ++ G ++ T A  +
Sbjct: 9   TTAISYPNGNP----HIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKL 64

Query: 182 FWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKY---SSELLNFPEEKWLPI---- 232
               ++    N +            Y + +     D Y    +      E   + +    
Sbjct: 65  GKTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYA 124

Query: 233 ----VKDYSVQAMMKIIRDDLKALNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               V+D +  A  +    D +   I       +  E+ +          +++  A +GY
Sbjct: 125 GWYSVRDEAYYAEDETEVRDGQRYAITTGTEVEWTEEESYFFRLSKYGDKLLELYANEGY 184

Query: 286 VY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           VY       L            + R    +   + G+D     +  D    Y    L Y 
Sbjct: 185 VYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTG-LGY- 242

Query: 342 KCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--LLCELVRLYRDG 395
                  F       ++++G D    + R  ++        A + +   +     L  +G
Sbjct: 243 PDTDNELFTKYWPADLHLIGKD----ITRFHSIYWPAFLWSAGVELPKRVFGHGFLLVNG 298

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +   ++VD  G D+VRF ++        +  F +    S+E+ +    
Sbjct: 299 E--KMSKSVGNVVDPANLVDAFGLDAVRFFLMR-------EVSFGQDGSYSEESII---- 345

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENA 512
               R  S               +  +N    +P   EF  ++ Q          +++ A
Sbjct: 346 ---NRINSDLANNLGNLAQRSLSMVAKNCGGAVPTHGEFTEADRQ----------ILDQA 392

Query: 513 TIAQEP 518
               EP
Sbjct: 393 AALYEP 398


>gi|23099516|ref|NP_692982.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746073|sp|Q8EPN2|SYV_OCEIH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22777745|dbj|BAC14017.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 883

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 101/331 (30%), Gaps = 65/331 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +      + G  +           +I     N TG +H+GH     + DT+  +
Sbjct: 16  NPKEVEEGRYQFWLDGKFFEATGDPDKEPYSIVIPPPNVTGRLHLGHAWDTSMQDTITRM 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L  + ++  E             E 
Sbjct: 76  KRMQGYDVL-------WLPGMDHAGIATQAKVEARLKESGTNRYELGR--EKFLEKAWEW 126

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y++                         IR   + L +  D          G    +
Sbjct: 127 KEEYAA------------------------FIRSQWEKLGLGLDYSRERFTLDEGLSDAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++   L  +G +Y G        +T+    D + +          +  P+  SD +   
Sbjct: 163 REVFVKLYEKGLIYRGEYIINWDPSTKTALSDIEVIYEEIQGKFYHMRYPIKGSDET--- 219

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV  K  +   L+ + V L  
Sbjct: 220 ----IEIATTRPET-------MLGD-----------TAVAVHPKDERYQHLIGKTVILPI 257

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            G       R  + +   +V  E+GS +V+ 
Sbjct: 258 VG-------REIEIVADDYVDMELGSGAVKI 281



 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ +    V+++ G+DS+R+ ++      + L F + KV+      
Sbjct: 521 LIRDADGRKMSKSLGNGVDPMDVIEKYGADSLRYFLMTGSTPGQDLRFHWEKVESTWN-- 578

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
             F  +   A   SI     + F   D DL     +P               LA     I
Sbjct: 579 --FANKVWNASRFSIMNM--EGFTYEDIDLTGELSLPDRWI-----------LARLNETI 623

Query: 510 ENATIA 515
           E  T  
Sbjct: 624 EQVTRN 629


>gi|138896204|ref|YP_001126657.1| valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196250160|ref|ZP_03148854.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267717|gb|ABO67912.1| Valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210344|gb|EDY05109.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 880

 Score = 66.5 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 97/339 (28%), Gaps = 81/339 (23%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHRAVEAGRYDWWLKGKFFETTGDPDKQPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRQ----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++  +L R+G +Y G         T+    D +                + K      Y
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPATKTALSDIE---------------VIYKEVKGALY 204

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYV--------KRLEAVAAAVSEKKAQINVLL 385
                               Y + +D SGY+          L   A AV     +   L+
Sbjct: 205 HLR-----------------YPL-ADGSGYIEVATTRPETMLGDTAVAVHPDDERYKHLI 246

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            ++V+L   G  I +       I   +V  E GS +V+ 
Sbjct: 247 GKMVKLPIVGREIPI-------IADEYVDMEFGSGAVKI 278



 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 57/308 (18%), Positives = 104/308 (33%), Gaps = 58/308 (18%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y    PP       Q  D+        L   STM   D + P  K      Y+ 
Sbjct: 424 KETGEIYVDHEPPADIENWEQDPDVLDTWFSSALWPFSTMGWPDTEAPDYKR-----YYP 478

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+         G+D +I+         V R+       + K+   +VL+  LV   RD 
Sbjct: 479 TDV------LVTGYD-IIFFW-------VSRMIFQGLEFTGKRPFKDVLIHGLV---RDA 521

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ +    V+D+ G+D++R+ +    +  + L F   KV+        F  
Sbjct: 522 QGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN----FAN 577

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           +   A   ++       + +LD     + V             ++  L E    +     
Sbjct: 578 KIWNASRFALMNMGGMTYEELDLS-GEKTVADHW---------ILTRLNETIDTVTKLAD 627

Query: 515 AQEPYKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             E  ++   LY     DL       +    E  +L     +       R  L +    +
Sbjct: 628 KYEFGEVGRTLYNFIWDDLCD----WY---IEMAKLPLYGDDETAKKTTRSVLAY----V 676

Query: 570 INSGLNII 577
           +++ + ++
Sbjct: 677 LDNTMRLL 684


>gi|89893191|ref|YP_516678.1| hypothetical protein DSY0445 [Desulfitobacterium hafniense Y51]
 gi|219666464|ref|YP_002456899.1| glutamyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|123397903|sp|Q250Q8|SYE_DESHY RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|89332639|dbj|BAE82234.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536724|gb|ACL18463.1| glutamyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 488

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 94/287 (32%), Gaps = 36/287 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+    LA        +    + +      +   +        +A
Sbjct: 7   APSPTGPLHIGGARSALFNYLLAR-------KEDGVFIVRSEDTDLERSSRESEHNIMEA 59

Query: 189 LY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L       D  +  G   G Y +     L  +Y+  LL   +  +      Y  +  ++ 
Sbjct: 60  LRWLNIQWDEGIEVGGDNGPYRQTERLALYQEYTDRLLASGDAYYC-----YCSEEELEQ 114

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R DL A                 +            R+  V       P+ +     D 
Sbjct: 115 ERQDLMAKGETPRYLGKCRHLSAAERQTYEAA----GRKPVVR---FRVPEGRQILINDR 167

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R +++F S  +GD     ++KSDG  TY   + A           ++I   G +H    
Sbjct: 168 VRGEVVFDSDGIGDY---VIVKSDGIPTY---NFAVVIDDTTMNITHVIR--GEEHLSNT 219

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            R   +  A+     +        + L  +    KMSKR GD   + 
Sbjct: 220 PRQVLIYQALGLPTPEFAH-----ISLILNTEGKKMSKRDGDTAVID 261


>gi|327439439|dbj|BAK15804.1| valyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 880

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 67/237 (28%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P           + G  +  +        +I     N TG +H+GH     + D L  +
Sbjct: 11  DPQQTEAGRYEWWLKGKFFEADPTSDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRM 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + ++ L                        
Sbjct: 71  KRMQGYDAL-------WLPGMDHAGIATQAKVEEKLRGEGI------------------- 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L    ++  +     IR     L +  D          G    +
Sbjct: 105 ------TRYDLGREKFLEKTWEWK-EEYASHIRAQWSKLGLGLDYSKERFTLDEGLSDAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           +++   L  +GY+Y G          +    D + +          ++ PL  +DGS
Sbjct: 158 KEVFVKLYEKGYIYRGERIINWDPAAKTALSDIEVIHKEVEGAFYHMEYPL--ADGS 212



 Score = 38.4 bits (88), Expect = 3.8,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 104/302 (34%), Gaps = 46/302 (15%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G    P+       D D     F S +     +D P  +S+    Y      
Sbjct: 423 KETGELYVGK-EAPEDAENWTQDEDVLDTWFSSALWPFSTMDWPNEESEMFKRY------ 475

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+         V R+       + ++   +VL+  LV   RD    K
Sbjct: 476 YPTNTLVTGYD-IIFFW-------VSRMIFQGKEFTGERPFKDVLIHGLV---RDAEGRK 524

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +    V+D+ G+DS+R+ +    +    D  +   K +S  N V  +     
Sbjct: 525 MSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQ-DLRYSTEKVESTWNFVNKI----- 578

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQ 516
                       F  ++ +      I       T++  +   L+     I+     +   
Sbjct: 579 -------WNASRFALMNMEGLTFEQIDLTGNLSTADKWI---LSRLNETIDRVTTLSDKY 628

Query: 517 EPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           E  ++   LY+ +   F   +    E  +L     +       R  L +    ++++ + 
Sbjct: 629 EFGEVGRELYNFIWDDFCSWY---IEMAKLPLYGEDEAAKLTTRSVLAY----VLDNTMR 681

Query: 576 II 577
           ++
Sbjct: 682 LL 683


>gi|195447206|ref|XP_002071111.1| GK25318 [Drosophila willistoni]
 gi|194167196|gb|EDW82097.1| GK25318 [Drosophila willistoni]
          Length = 448

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 15/189 (7%)

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK-ENPVFYVQYAYARCRS 463
           G+      +++ +GS +V   +   +++         V+  S       ++ Y  AR  +
Sbjct: 267 GNNKRDAMLMESLGSAAVVVDLFEVRHASAATV----VRNSSGCSKGAAFILYNSARLET 322

Query: 464 IFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQE---- 517
           + R     +   +   L P N I      D  + QLI  +L  +P V E+  +  +    
Sbjct: 323 LLRSFNAQVKAGVYQPLPPLNEIDFSLLEDDLDWQLIYGYLLAFPHVAESTLVQLQRGLC 382

Query: 518 -PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             + L  ++ D+A  F  ++ + +   + R        +   R+ L+ AV  ++N+ L I
Sbjct: 383 GVHTLVHFIADMARQFSRYYRNKQVLLQGRDQLT---PVLHARVYLIKAVREVLNASLAI 439

Query: 577 IGVESPNEM 585
           +G++    M
Sbjct: 440 MGIKPVTYM 448


>gi|295706762|ref|YP_003599837.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804421|gb|ADF41487.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 880

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 107/368 (29%), Gaps = 85/368 (23%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      + G  +      +     I     N TG +H+GH     + D L  +
Sbjct: 13  DPKAVEENRYQYWLDGKFFEATNDPEKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L +           G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRSE----------GKSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    NF  E W         +     IR     L +  D          G    +
Sbjct: 115 ---------NFVAETWK------WKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++   L ++G +Y G         T+                                 
Sbjct: 160 REVFVTLYKKGLIYRGEYIINWDPATKTA------------------------------- 188

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYV--------KRLEAVAAAVSEKKAQINVLL 385
             +D+       +  F +M Y + +D SG++          L   A AV  +  +   L+
Sbjct: 189 -LSDIEVIYKDVQGAFYHMRYPL-ADGSGHIEIATTRPETMLGDTAVAVHPEDDRYKHLI 246

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMMLWRKNSELLD--FDFCKV 442
            + V L   G  I         I     VD E GS +V+       N   +    +  ++
Sbjct: 247 GKKVVLPIVGREI--------PIVGDDYVDMEFGSGAVKITPAHDPNDFEIGNRHNLERI 298

Query: 443 KEQSKENP 450
              +++  
Sbjct: 299 LVMNQDGT 306



 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 90/240 (37%), Gaps = 35/240 (14%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R +   + V G D   +      +   +    K+   +VL+  LV   RD    KMSK
Sbjct: 473 FKRYYPTNVLVTGYD-IIFFWVSRMIFQGLEFTGKRPFDDVLIHGLV---RDAEGRKMSK 528

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             G+ +    V+++ G+DS+R+ +    +  + L F F KV+        F  +   A  
Sbjct: 529 SLGNGVDPMEVIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN----FANKIWNASR 584

Query: 462 RSIFRQAKDIFPDLDF----DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            ++       F +LD      +  + ++ + +E      +L     E+  V         
Sbjct: 585 FALMNMDGITFEELDLSGGKSVADKWILTRLNETIEHVTKLADK-YEFGEV----GR--- 636

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
              L  +++D    F   +    E  +L     +       R  L +    ++++ + ++
Sbjct: 637 --ILYNFIWD---DFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDNTMRLL 684


>gi|294501414|ref|YP_003565114.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351351|gb|ADE71680.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 880

 Score = 66.1 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 107/368 (29%), Gaps = 85/368 (23%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      + G  +      +     I     N TG +H+GH     + D L  +
Sbjct: 13  DPKAVEENRYQYWLDGKFFEATNDPEKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L +           G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRSE----------GKSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    NF  E W         +     IR     L +  D          G    +
Sbjct: 115 ---------NFVAETWK------WKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++   L ++G +Y G         T+                                 
Sbjct: 160 REVFVTLYKKGLIYRGEYIINWDPATKTA------------------------------- 188

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYV--------KRLEAVAAAVSEKKAQINVLL 385
             +D+       +  F +M Y + +D SG++          L   A AV  +  +   L+
Sbjct: 189 -LSDIEVIYKDVQGAFYHMRYPL-ADGSGHIEIATTRPETMLGDTAVAVHPEDDRYKHLI 246

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMMLWRKNSELLD--FDFCKV 442
            + V L   G  I         I     VD E GS +V+       N   +    +  ++
Sbjct: 247 GKKVVLPIVGREI--------PIVGDDYVDMEFGSGAVKITPAHDPNDFEIGNRHNLERI 298

Query: 443 KEQSKENP 450
              +++  
Sbjct: 299 LVMNQDGT 306



 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 86/240 (35%), Gaps = 35/240 (14%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R +   + V G D   +      +   +    K+   +VL+  LV   RD    KMSK
Sbjct: 473 FKRYYPTNVLVTGYD-IIFFWVSRMIFQGLEFTGKRPFDDVLIHGLV---RDAEGRKMSK 528

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             G+ +    V+++ G+DS+R+ +    +  + L F F KV+                + 
Sbjct: 529 SLGNGVDPMEVIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWNF---------ANKI 579

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP--- 518
            +  R A      + F+    +      E   ++  ++  L E    +       E    
Sbjct: 580 WNASRFALMNMDGITFEELDLS-----GEKSVADKWILTRLNETIEHVTKLADKYEFGEV 634

Query: 519 -YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
              L  +++D    F   +    E  +L     +       R  L +    ++++ + ++
Sbjct: 635 GRILYNFIWD---DFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDNTMRLL 684


>gi|320163225|gb|EFW40124.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 646

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 45/228 (19%)

Query: 394 DGMPI---KMSKRAGDFITLRH----VVDEVGSDSVRFMMLWRKNSELLDFDFCKV--KE 444
           DG P+    +  R G  +        + + V   ++   +L +     LD +  KV   +
Sbjct: 415 DGAPVHRQSLQTRPGSVVGTGDPTIQLAESVVRATIVSSVLGQSTQGNLDLNVPKVIGFQ 474

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLA 503
             +      + Y + R RSI  +      +       P   +  +   +  E +++  + 
Sbjct: 475 DGQYATGSTLIYNHGRLRSILTKYATTAAEHGLPSTPPLGSVRFDLLQENHEWEMLYSVV 534

Query: 504 EYPRVIEN-------ATIAQ-------EP------------------YKLAFYLYDLASV 531
            +P +I +       A  A+       EP                  +KL  +LY LA  
Sbjct: 535 TFPDLIRSLYQPISAALEARRSSLAQSEPTPTSWLRTYPTQVSRVDVHKLVSHLYRLARC 594

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
           F  ++ H                +   R+ L+ AV  +  +GLN++ +
Sbjct: 595 FSQYFGHVHVVVPR---TDATAAMMDARIVLLSAVMQVFENGLNLLNI 639


>gi|260663236|ref|ZP_05864128.1| glutamyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552428|gb|EEX25479.1| glutamyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 498

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 101/292 (34%), Gaps = 24/292 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    I     S     +  
Sbjct: 11  APSPTGHLHIGNARTALFNYLFAR--RNHGKFIIRIE-DTDTKRNIADGERSQLDNLKWM 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D    +G   G Y +   K++  +Y  EL++          K Y  +  ++  R+ 
Sbjct: 68  GLDWDEGPDKGGDFGPYRQSERKDIYAQYIQELMDKGL-----AYKSYMTEEELEAQRE- 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A    H +   E ++       I+   +    +G         PK +  +  D+ +  
Sbjct: 122 --AQKAAHQMPHYEYEYAGMSDDQIKAAQEAAEEKGLKPVIRFRVPKDEVFEWEDLVKGP 179

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F +  +G D    + K DG  TY FA  +     K    F       G DH     + 
Sbjct: 180 MSFEAQSIGGDF--VIQKRDGMPTYNFAVVIDDHLMKISHVFR------GDDHVSNTPKQ 231

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            A+  A+  K  +       +  +  +    K+SKR    +       ++G 
Sbjct: 232 MAIYQALGWKVPEFGH----MSLIINNETGKKLSKRDESVLQFIEQYRDLGY 279


>gi|42781300|ref|NP_978547.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42737222|gb|AAS41155.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 105

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 6  DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
          D+  +    L  I      +K+ILD  +IE P+    G ++      L++     P  IA
Sbjct: 35 DYKKQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDVAF-PCFSLAKQYKKSPAIIA 91

Query: 66 ELIVARI 72
          + +  ++
Sbjct: 92 KEVAEKL 98


>gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica]
 gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica]
          Length = 532

 Score = 65.7 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 86/496 (17%), Positives = 153/496 (30%), Gaps = 75/496 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    HVGH    V+ D +      +G +      I++ G +I T A  +  + +     
Sbjct: 31  PNAEPHVGHLYSMVLADVIKRYNGLNGKDTYLLTGIDEHGLKIQTAAEKLNLQPKILCDQ 90

Query: 192 NDSDLPEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKWLPIV----------KDY 236
                 +    G      +++    +  +  +       +  ++             + Y
Sbjct: 91  LAEKFKQLAEVGNIDNNRFMRTTDADHVNTVNDMWDRLTKAGYIYKGSHSGYYCVSDETY 150

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG-------YVYEG 289
             +     +   L ++    ++  +E++ +    S +RD +               VY G
Sbjct: 151 YPRDKCHEVNGRLVSIETGKEVEWTEEENYFFRLSAMRDKLLEFYNANPEFVMPKEVYRG 210

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRST-MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           I+                  L     + GDD     +  D    Y  A           G
Sbjct: 211 IVDEVSRDLPDLSISRPTNRLSWGIPVPGDDSQVIYVWLDALVNYATAQ----------G 260

Query: 349 FDNM---IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           FD +   ++++G D    +     A   A   K  +  ++    +         KMSK  
Sbjct: 261 FDTVSEAVHIVGKDIQRFHAIYWPAFLLAAGIKPPKSVLVHSHWIS-----EGQKMSKSI 315

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY--ARCR 462
           G+ +   HV+ + GSDSVRF +L        D DF + K   K N +   +      R  
Sbjct: 316 GNVVDPMHVISKYGSDSVRF-LLMCDGHLHKDNDFTETKIAEKHNTMLVNKLGNLLMRIT 374

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA--TIAQEPYK 520
           S      D                   EF T+  +LI  L E P  +  A       P  
Sbjct: 375 SAKFNLVDSLEQPRQKTVEDMAEFFGPEFTTTRNELIRALKELPD-VYKADMARGSTPKT 433

Query: 521 LAF--YLYDLASVFHGHWSHGRENPRLRFVQAN------NRKLTMMRLQLVH-------- 564
           +    Y+ +LA+       H  E     F +               R+ L+         
Sbjct: 434 ITDLYYVINLANK------HVEETKPWSFKEKEIPAMILREAAETARIALILMQPFTPEF 487

Query: 565 AVASIINSGLNIIGVE 580
           A       GL+ +GV+
Sbjct: 488 ATK-----GLDRLGVK 498


>gi|135181|sp|P11931|SYV_BACST RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|143797|gb|AAA22879.1| valyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 880

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 97/339 (28%), Gaps = 81/339 (23%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHRAVEAGRYEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRQ----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++  +L R+G +Y G         T+    D +                + K      Y
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPVTKTALSDIE---------------VVYKEVKGALY 204

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYV--------KRLEAVAAAVSEKKAQINVLL 385
                               Y + +D SG++          L   A AV     +   L+
Sbjct: 205 HMR-----------------YPL-ADGSGFIEVATTRPETMLGDTAVAVHPDDERYKHLI 246

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            ++V+L   G  I +       I   +V  E GS +V+ 
Sbjct: 247 GKMVKLPIVGREIPI-------IADEYVDMEFGSGAVKI 278



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 62/317 (19%), Positives = 103/317 (32%), Gaps = 76/317 (23%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G +Y     PPK     + D D     F S      TM   D D P  K      Y+
Sbjct: 424 KETGEIYVD-HEPPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKR-----YY 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             D+         G+D +I+         V R+       + K+   +VL+  LV   RD
Sbjct: 478 PTDV------LVTGYD-IIFFW-------VSRMIFQGLEFTGKRPFKDVLIHGLV---RD 520

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    V+D+ G+D++R+ +    +  + L F   KV+        F 
Sbjct: 521 AQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN----FA 576

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
            +   A   ++       + +LD     + V                 L      IE  T
Sbjct: 577 NKIWNASRFALMNMGGMTYEELDLS-GEKTVADHWI------------LTRLNETIETVT 623

Query: 514 IAQEPYKLAFY--------LY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
              E      Y        LY     DL       +    E  +L     +       R 
Sbjct: 624 KLAE-----KYEFGERGRTLYNFIWDDLCD----WY---IEMAKLPLYGDDEAAKKTTRS 671

Query: 561 QLVHAVASIINSGLNII 577
            L +    ++++ + ++
Sbjct: 672 VLAY----VLDNTMRLL 684


>gi|332817161|ref|XP_530602.3| PREDICTED: DALR anticodon-binding domain-containing protein 3 [Pan
           troglodytes]
          Length = 389

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 206 EIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 265

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 266 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRT 325

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 326 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 379

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 380 MLGLPPL 386


>gi|254071595|gb|ACT64557.1| DALR anticodon binding domain containing 3 protein [synthetic
           construct]
          Length = 543

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 360 EIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 419

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 420 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRT 479

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 480 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 533

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 534 MLGLPPL 540


>gi|310131912|ref|XP_003120847.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           [Homo sapiens]
 gi|21752006|dbj|BAC04095.1| unnamed protein product [Homo sapiens]
 gi|21752124|dbj|BAC04123.1| unnamed protein product [Homo sapiens]
          Length = 376

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 193 EIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 252

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 253 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRT 312

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 313 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 366

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 367 MLGLPPL 373


>gi|38146111|ref|NP_060584.3| DALR anticodon-binding domain-containing protein 3 isoform 2 [Homo
           sapiens]
          Length = 376

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 193 EIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 252

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 253 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRT 312

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 313 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 366

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 367 MLGLPPL 373


>gi|66840151|gb|AAH32440.2| DALR anticodon binding domain containing 3 [Homo sapiens]
          Length = 543

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 360 EIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 419

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 420 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRT 479

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 480 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 533

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 534 MLGLPPL 540


>gi|58331230|ref|NP_001009996.1| DALR anticodon-binding domain-containing protein 3 isoform 1 [Homo
           sapiens]
 gi|296434472|sp|Q5D0E6|DALD3_HUMAN RecName: Full=DALR anticodon-binding domain-containing protein 3
 gi|29126969|gb|AAH47683.1| DALR anticodon binding domain containing 3 [Homo sapiens]
 gi|254071597|gb|ACT64558.1| DALR anticodon binding domain containing 3 protein [synthetic
           construct]
          Length = 543

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 360 EIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 419

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 420 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRT 479

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 480 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 533

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 534 MLGLPPL 540


>gi|269128138|ref|YP_003301508.1| DALR anticodon binding domain-containing protein [Thermomonospora
           curvata DSM 43183]
 gi|268313096|gb|ACY99470.1| DALR anticodon binding domain protein [Thermomonospora curvata DSM
           43183]
          Length = 241

 Score = 65.3 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
             +  E  L+  LAE P   E A   ++   L  +L  LA  +H  +      P L    
Sbjct: 149 LKEPEEGTLLALLAEQPGRAEQAARERDASPLQHHLERLADAYHRVYERC---PALPSGA 205

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
                +   R  L  AV   + +GL +IG      
Sbjct: 206 EEPGAVHAARRTLAEAVRIALGNGLKMIGESPRER 240



 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 27 KILDRIVIERP-RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85
          ++   + +E P    A G   T  A+ L+         +A +I  R+   P + +V ++G
Sbjct: 12 ELTADVPVEVPLSSAAAGEYRTPVALRLAAAQRRPGTEVARVIAGRLAGRPGLGAVRVSG 71

Query: 86 KGFINL 91
           GF+ +
Sbjct: 72 PGFLTI 77


>gi|296331646|ref|ZP_06874115.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675395|ref|YP_003867067.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151241|gb|EFG92121.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413639|gb|ADM38758.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 880

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L     +  +     IR     L +  D          G    +
Sbjct: 102 -REEGKSRYDLGREKFLEETWKWK-EEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L  +G +Y G         T+    D
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 104/300 (34%), Gaps = 42/300 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G L  P+     + D D     F S +     +  P + ++    Y+  D+ 
Sbjct: 424 KETGELYVG-LEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDITAEDFKRYYPTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+   S        +        E+  +  ++      L RD    K
Sbjct: 482 -----LVTGYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LIRDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+              +
Sbjct: 526 MSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVES------------TW 573

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D    + +    E   ++  ++  L E    +       E 
Sbjct: 574 NFANKI--WNASRFALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEF 631

Query: 519 YKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++  +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 632 GEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|321312340|ref|YP_004204627.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018614|gb|ADV93600.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 880

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L     +  +     IR     L +  D          G    +
Sbjct: 102 -REEGKPRYDLGREKFLEETWKWK-EEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L  +G +Y G         T+    D
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 105/300 (35%), Gaps = 42/300 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G L  P+     + D D     F S +     +  P + ++    Y+  D+ 
Sbjct: 424 KETGELYVG-LEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+   S        +        E+  +  ++      L RD    K
Sbjct: 482 -----LVTGYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LIRDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+               
Sbjct: 526 MSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWNF---------A 576

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            +  +  R     F  ++ D    + +    E   ++  ++  L E    +       E 
Sbjct: 577 NKIWNASR-----FALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEF 631

Query: 519 YKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++  +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 632 GEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|73985838|ref|XP_541888.2| PREDICTED: similar to DALR anticodon binding domain containing 3
           isoform 1 [Canis familiaris]
          Length = 652

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            V   + + +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 469 EVFSILSAATIKFEMLSTAPQSQLLLALADSSISTKGTRSGTFVMYNCARLATLFEGYKH 528

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVI-ENATIAQEPY-------- 519
                 +  FP  + +      D  E  L+ + +  +P ++ + A +A            
Sbjct: 529 STEQGLYPTFPPVSSLDFSLLQDEGEWLLLFNGVLPFPDLLGQTAALACAASGLHVTART 588

Query: 520 -KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L      RLQL+ AV  ++++GL 
Sbjct: 589 ETMCKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFARLQLLRAVREVLHTGLA 642

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 643 MLGLPPL 649


>gi|332024879|gb|EGI65067.1| DALR anticodon-binding domain-containing protein 3 [Acromyrmex
           echinatior]
          Length = 439

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 19/185 (10%)

Query: 414 VDEVGSDSVRFMMLWRKNSELLDF---DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           +  + +  + F ++  K S  +     +F   +  +      +  Y  AR  +I  +  +
Sbjct: 261 LHNLANAIIIFELMAVKPSRSVIIRNNNFEDDRSITNTRGASFALYNTARIATIIAKHNE 320

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATI-----AQEPYKLAF 523
                D+   P    +      +  E +LI + +  YP++I +           P  +  
Sbjct: 321 KVLRGDYPSLPDIKNVDFSQLQEKEEWELIYNFIFGYPQMINDCLKCEPSFHIYPQVVCL 380

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLNIIGVE 580
           +L  L   F  ++       ++R +      L    + RL ++ A+  I  + L+I+G++
Sbjct: 381 FLSRLCQKFSVYY------RKVRILTEGGNHLIPKMVARLYMLRALYVIFENALDILGIK 434

Query: 581 SPNEM 585
             + M
Sbjct: 435 PVSRM 439


>gi|296131809|ref|YP_003639056.1| glutamyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030387|gb|ADG81155.1| glutamyl-tRNA synthetase [Thermincola potens JR]
          Length = 484

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 140/382 (36%), Gaps = 51/382 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+    LA    ++G  + R   I D    +   +        +A
Sbjct: 9   APSPTGPLHIGGARSALFNWLLAR--KYNGTMIVR---IED--TDLERSSRESEENILKA 61

Query: 189 LY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     + D  + +G   G Y +    ++  +Y+ +LL   +  +    ++        +
Sbjct: 62  LEWLGLDWDEGIGKGGSNGPYRQTERLDIYREYAQKLLAAGQAYYCYCTEEELDAERQAL 121

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +        +     ++E+D  R +    + +I                P+++     D+
Sbjct: 122 LAKGEMPRYLGKCRHLTEEDRARYEAEGRKPVI------------RFRVPENENIVVRDL 169

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R  ++F S  +GD     ++KSDG  TY   + A        G  ++  V G +H    
Sbjct: 170 VRGNVVFESNGIGDY---VIVKSDGIPTY---NFAVVLDDALMGITHV--VRGEEHLSNT 221

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVR 423
            R   +  A+  +  Q        V L       KMSKR G   I     +  +    V 
Sbjct: 222 PRQLMIYDALGLQAPQFAH-----VSLILGKDRSKMSKRHGATAIEQYEKLGYLPEALVN 276

Query: 424 FMMLWRKNSELLD--FDFCKVKEQSK-----ENPVFY------VQYAYARCRS-IFRQAK 469
           F++L   + E  +  F   ++ EQ       +NP  +          Y   +S + R A 
Sbjct: 277 FLVLLGWSPEGEEEIFSLEQLVEQFSLDRVAKNPAVFDLDKLNWLNGYYIRQSPVERIAA 336

Query: 470 DIFPDLDFDLFPRNVIPQESEF 491
              P L    +  + +  +SE+
Sbjct: 337 MALPYLKEAGYVSDQVTADSEW 358


>gi|332215916|ref|XP_003257088.1| PREDICTED: DALR anticodon-binding domain-containing protein 3
           [Nomascus leucogenys]
          Length = 376

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L          +K      +V Y  AR  ++F   K 
Sbjct: 193 EIFGVLSVATIKFEMLSTAPQNQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKC 252

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENAT--IAQEP--YK---- 520
                 +  FP  + +      D  E  L+   +  +P ++          P  +     
Sbjct: 253 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAART 312

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 313 EMICKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLA 366

Query: 576 IIGVESP 582
           ++G+   
Sbjct: 367 MLGLPPL 373


>gi|291485223|dbj|BAI86298.1| valyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 880

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L     +  +     IR     L +  D          G    +
Sbjct: 102 -REEGKSRYDLGREKFLEETWKWK-EEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L  +G +Y G         T+    D
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 105/300 (35%), Gaps = 42/300 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G L  P+     + D D     F S +     +  P + ++    Y+  D+ 
Sbjct: 424 KETGELYVG-LEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+   S        +        E+  +  ++      L RD    K
Sbjct: 482 -----LVTGYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LIRDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+               
Sbjct: 526 MSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWNF---------A 576

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            +  +  R     F  ++ D    + +    E   ++  ++  L E    +       E 
Sbjct: 577 NKIWNASR-----FALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEF 631

Query: 519 YKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++  +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 632 GEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|283457812|ref|YP_003362406.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133821|dbj|BAI64586.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 514

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 136/426 (31%), Gaps = 65/426 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + + NP    H+GH    +  D LA      G++V      ++ G ++ T A  +
Sbjct: 9   TTAISYPNGNP----HIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKL 64

Query: 182 FWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKY---SSELLNFPEEKWLPI---- 232
               ++    N +            Y + +     D Y    +      E   + +    
Sbjct: 65  GKTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYA 124

Query: 233 ----VKDYSVQAMMKIIRDDLKALNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               V+D +  A  +    D +   I       +  E+ +          +++  A +G+
Sbjct: 125 GWYSVRDEAYYAEDETEVRDGQRYAIATGTEVEWTEEESYFFRLSKYGDKLLELYANEGF 184

Query: 286 VY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           VY       L            + R    +   + G+D     +  D    Y    L Y 
Sbjct: 185 VYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITG-LGY- 242

Query: 342 KCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--LLCELVRLYRDG 395
                  F       ++++G D    + R  ++        A I +   +     L  +G
Sbjct: 243 PDTDNELFAKYWPADLHLIGKD----ITRFHSIYWPAFLWSAGIELPKRVFGHGFLLVNG 298

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +   ++VD  G D+VRF ++        +  F +    S+E+ +    
Sbjct: 299 E--KMSKSVGNVVDPANLVDAFGLDAVRFFLMR-------EVSFGQDGSYSEESII---- 345

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENA 512
               R  S               +  +N    +P   EF  ++ Q          +++ A
Sbjct: 346 ---NRINSDLANNLGNLAQRSLSMVAKNCGGAVPAHGEFTEADRQ----------ILDEA 392

Query: 513 TIAQEP 518
               EP
Sbjct: 393 AALYEP 398


>gi|221310749|ref|ZP_03592596.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315074|ref|ZP_03596879.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319993|ref|ZP_03601287.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324275|ref|ZP_03605569.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767644|ref|NP_390687.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|251757438|sp|Q05873|SYV_BACSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|225185272|emb|CAB14769.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L     +  +     IR     L +  D          G    +
Sbjct: 102 -REEGKSRYDLGREKFLEETWKWK-EEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L  +G +Y G         T+    D
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 105/300 (35%), Gaps = 42/300 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G L  P+     + D D     F S +     +  P + ++    Y+  D+ 
Sbjct: 424 KETGELYVG-LEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+   S        +        E+  +  ++      L RD    K
Sbjct: 482 -----LVTGYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LIRDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+               
Sbjct: 526 MSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWNF---------A 576

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            +  +  R     F  ++ D    + +    E   ++  ++  L E    +       E 
Sbjct: 577 NKIWNASR-----FALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEF 631

Query: 519 YKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++  +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 632 GEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|452309|emb|CAA54458.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L     +  +     IR     L +  D          G    +
Sbjct: 102 -REEGKSRYDLGREKFLEETWKWK-EEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L  +G +Y G         T+    D
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 105/300 (35%), Gaps = 42/300 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G L  P+     + D D     F S +     +  P + ++    Y+  D+ 
Sbjct: 424 KETGELYVG-LEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+   S        +        E+  +  ++      L RD    K
Sbjct: 482 -----LVTGYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LIRDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+               
Sbjct: 526 MSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWNF---------A 576

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            +  +  R     F  ++ D    + +    E   ++  ++  L E    +       E 
Sbjct: 577 NKIWNASR-----FALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEF 631

Query: 519 YKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++  +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 632 GEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|109039777|ref|XP_001111071.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           isoform 3 [Macaca mulatta]
          Length = 376

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 24/188 (12%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L      K           +V Y  AR  ++F   K 
Sbjct: 193 EIFGVLSVATIKFEMLSTAPQSQLFLALADKNISTKGTKSGTFVMYNCARLATLFESYKC 252

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATIA--QEP--YK---- 520
                 +  FP  + +      D  E  L+ + +  +P ++    +     P  +     
Sbjct: 253 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNNILPFPDLLSQTAMLDCTAPGLHITART 312

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM----RLQLVHAVASIINSGL 574
             +  +L  L+  F  +++          +    R         RLQL+ AV  ++++GL
Sbjct: 313 EMMCKFLVQLSMDFSSYYNRVH-------ILGEPRPHRFGQMFVRLQLLRAVREVLHTGL 365

Query: 575 NIIGVESP 582
            ++G+   
Sbjct: 366 AMLGLPPL 373


>gi|109039768|ref|XP_001111032.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           isoform 2 [Macaca mulatta]
          Length = 543

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 24/188 (12%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
            +   +   +++F ML       L      K           +V Y  AR  ++F   K 
Sbjct: 360 EIFGVLSVATIKFEMLSTAPQSQLFLALADKNISTKGTKSGTFVMYNCARLATLFESYKC 419

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATIA--QEP--YK---- 520
                 +  FP  + +      D  E  L+ + +  +P ++    +     P  +     
Sbjct: 420 SMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNNILPFPDLLSQTAMLDCTAPGLHITART 479

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM----RLQLVHAVASIINSGL 574
             +  +L  L+  F  +++          +    R         RLQL+ AV  ++++GL
Sbjct: 480 EMMCKFLVQLSMDFSSYYNRVH-------ILGEPRPHRFGQMFVRLQLLRAVREVLHTGL 532

Query: 575 NIIGVESP 582
            ++G+   
Sbjct: 533 AMLGLPPL 540


>gi|330688484|ref|NP_001178326.1| DALR anticodon binding domain containing 3 [Bos taurus]
 gi|297488693|ref|XP_002697089.1| PREDICTED: DALR anticodon binding domain containing 3 [Bos taurus]
 gi|296474913|gb|DAA17028.1| DALR anticodon binding domain containing 3 [Bos taurus]
          Length = 541

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 24/189 (12%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            +   +   +V+F ML       L          +K +    +V Y  AR  ++F   K 
Sbjct: 356 DIFRVLSVATVKFEMLSTAPQSQLLLALADSSISTKGSKSGTFVMYNCARLATLFEGYKC 415

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIEN-ATIAQ---EP--YK-- 520
                 +  FP  + +      D  E  L+   +  +  ++   A +      P  +   
Sbjct: 416 SVEQGLYPTFPPVSSLDFSLLRDEGEWLLLFNSILPFSDLLRQMAALTLTRTAPGLHVTA 475

Query: 521 ----LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSG 573
               +  +L  L+  F  +++      R+  +      L      RLQL+ AV  ++++G
Sbjct: 476 RTETVCKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFARLQLLRAVREVLHAG 529

Query: 574 LNIIGVESP 582
           L ++G+   
Sbjct: 530 LAMLGLPPL 538


>gi|212638460|ref|YP_002314980.1| valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|254783550|sp|B7GH39|SYV_ANOFW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|212559940|gb|ACJ32995.1| Valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 875

 Score = 64.9 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 8   DHRAVEANRYEWWLKGKFFEATSDETKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L N           G     +G+E 
Sbjct: 68  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRNE----------GKTRYDLGRE- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  E   + EE                 IR     L +  D          G    +
Sbjct: 110 --KFVEETWKWKEE-------------YAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++  +L ++G +Y G         T+    D
Sbjct: 155 REVFVSLYKKGLIYRGEYIINWDPVTKTALSD 186



 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 105/304 (34%), Gaps = 50/304 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT-YFAADLA 339
              G VY    PP   +  ++ D D     F S +          K+   Y  Y+  D+ 
Sbjct: 419 KETGEVYVDHEPPADIENWEQ-DQDVLDTWFSSALWPFSTMGWPDKTSADYNRYYPTDV- 476

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+         V R+   A   + K+   +VL+  LV   RD    K
Sbjct: 477 -----LVTGYD-IIFFW-------VSRMIFQALEFTGKRPFKDVLIHGLV---RDAQGRK 520

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F   KV+              +
Sbjct: 521 MSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLRFSTEKVEA------------TW 568

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ + F    I    E   ++  ++  L E    +       E 
Sbjct: 569 NFVNKI--WNASRFALMNMEGFTYEDIDLHGEKSVADHWILTRLNETIETVTKLADKYEF 626

Query: 519 YKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
            ++   LY     DL       +    E  +L     + +     R  L +    +++  
Sbjct: 627 GEVGRVLYNFIWDDLCD----WY---IEMAKLPLYGDDEQAKKTTRSVLAY----VLDQT 675

Query: 574 LNII 577
           + ++
Sbjct: 676 MRLL 679


>gi|288553603|ref|YP_003425538.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544763|gb|ADC48646.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 880

 Score = 64.6 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 104/360 (28%), Gaps = 69/360 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P        S  + G  +      K    +I     N TG +H+GH     + D L+ +
Sbjct: 13  NPQETESKWYSYWLEGKYFEATGDSKKQPYSIVIPPPNVTGKLHLGHAWDTTLQDILSRV 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L                        
Sbjct: 73  KRMQGYDTL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR+    L +  D          G    +
Sbjct: 102 -REEGVSRYDLGREKFLEKSWEWK-EEYADFIRNQWSKLGLSLDYSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            ++   L  +G +Y G       +     D   K  L    ++  DV       +   T 
Sbjct: 160 NEVFVKLYEKGLIYRG-------EYIINWDPQTKTALSDIEVIYQDVQGAFYHMNYPLTD 212

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            + ++     + E        ++G             A AV  +  +   L+ + V L  
Sbjct: 213 GSGEIEVATTRPET-------MLGD-----------TAVAVHPEDERYKHLIGKTVTLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENP 450
            G  I         I     VD E GS +V+       N   +    +  ++   +++  
Sbjct: 255 TGREI--------PIVADDYVDMEFGSGAVKITPAHDPNDFEIGNRHNLERILVMNEDGT 306



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 101/304 (33%), Gaps = 50/304 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G VY G    PK     K D D     F S +                T    D   
Sbjct: 424 KETGEVYVG-HEAPKDPENWKQDEDVLDTWFSSALWPF------------STMGWPDTNA 470

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPI 398
               YER +   + V G D   +      +   +    K+   +VL+  LV   RD    
Sbjct: 471 AD--YERFYTTNVLVTGYD-IIFFWVSRMIFQGLEFTGKRPFNDVLIHGLV---RDSEGR 524

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ +    V+D+ G+D++RF +    +    L F + KV+              
Sbjct: 525 KMSKSLGNGVDPMDVIDKYGADALRFFLSTGSSPGNDLRFYWEKVESTWNFG-------- 576

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN---ATI 514
             +  +  R     F  ++ D    + I    E   ++  ++  L E    +     A  
Sbjct: 577 -NKIWNASR-----FALMNMDGLTYDEIDLSGEKSIADKWILTRLQETTEDVTRLIDAYE 630

Query: 515 AQEPYKLA-FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
             E  +L   +++D    F   +    E  +L     N       R  L +    +++  
Sbjct: 631 FGEVGRLLYNFIWD---DFCDWY---IEMAKLPLNSDNEEAKRTTRSVLAY----VLDQT 680

Query: 574 LNII 577
           + ++
Sbjct: 681 MRLL 684


>gi|157111484|ref|XP_001651586.1| hypothetical protein AaeL_AAEL005905 [Aedes aegypti]
 gi|108878355|gb|EAT42580.1| conserved hypothetical protein [Aedes aegypti]
          Length = 395

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 77/193 (39%), Gaps = 19/193 (9%)

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           R  D    +  +  +G  +    ML  K S  +  D  K K QS +   F + Y YAR  
Sbjct: 212 RVRDHQRFQETIASLGRSAAIVDMLESKTSSPI--DMRKEKNQSSKGAAF-ILYNYARIS 268

Query: 463 SIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI-VHLAEYPRVIENATIA----- 515
            +F+  A+        +L P   +      +  E  L  V++  +P +++ A        
Sbjct: 269 VLFKTFAEKQKTGYYPELPPLENVDYSLLSEEDEWHLFWVYVVGFPEMLKQALGDGQLTR 328

Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINS 572
             P+ +  +   L      ++       R+R +  N   L      R+ L+ +V  I+++
Sbjct: 329 LSPHLVLGFTSGLVICLSKYY------RRVRILTENRDHLLPTMYARIYLLKSVYYILST 382

Query: 573 GLNIIGVESPNEM 585
            L+I+ +E+  +M
Sbjct: 383 LLDILDLEAVTQM 395


>gi|299535625|ref|ZP_07048946.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728825|gb|EFI69379.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 881

 Score = 64.6 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        + G  +           +I     N TG +H+GH     + D L  +
Sbjct: 12  DPQSIEAGRYEWWLQGKFFEAQPESGKKPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRM 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L  ++                    
Sbjct: 72  KRMQGYDAL-------WLPGMDHAGIATQAKVEAKLREDNI------------------- 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L    ++  +     IRD    L +  D         +G    +
Sbjct: 106 ------TRYDLGREKFLEKTWEWK-EEYAGHIRDQWAKLGLGLDYTRERFTLDKGLSDAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          +    D
Sbjct: 159 KTVFVQLYEKGLIYRGERIINWDPAAKTALSD 190



 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 36/223 (16%)

Query: 363 YVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           +      +   +     +   +VL+  LV   RDG   KMSK  G+ +    V+++ G+D
Sbjct: 490 FFWVSRMIFQGLEFTDQRPFKDVLIHGLV---RDGEGRKMSKSLGNGVDPMDVIEQYGAD 546

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           S+R+ +                   +  +P   ++Y   +  +++  A  I+    F L 
Sbjct: 547 SLRYFL------------------ATGSSPGQDLRYTTEKVEAVWNFANKIWNASRFALM 588

Query: 481 PRNVIPQESEFDTSELQLIVH--LAEYPRVIENA---TIAQEPYKLAFYLYD-LASVFHG 534
             + +  +    T E  +     L      IE         E  ++   LY+ +   F  
Sbjct: 589 NMDGMTYDEIDLTGEKSVADKWILTRLNETIERVTSLAERYEFGEVGRELYNFIWDDFCS 648

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            +    E  +L     ++      R  L +    +++  + ++
Sbjct: 649 WY---IEMAKLPLYGEDDVAKKTTRSILAY----VLDQTMRLL 684


>gi|56421173|ref|YP_148491.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819656|sp|Q5KWL3|SYV_GEOKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56381015|dbj|BAD76923.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 880

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 99/331 (29%), Gaps = 65/331 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHRAVEAGRYEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRQ----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++  +L R+G +Y G         T+    D + +          +  PL  +DGS   
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRYPL--ADGS--- 214

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV     +   L+ ++V+L  
Sbjct: 215 --GCIEVATTRPET-------MLGD-----------TAVAVHPDDERYKHLIGKMVKLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            G  I +       I   +V  E GS +V+ 
Sbjct: 255 VGREIPI-------IADEYVDMEFGSGAVKI 278



 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 59/309 (19%), Positives = 106/309 (34%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G +Y     PPK     + D D     F S      TM   D + P  K      Y+
Sbjct: 424 KETGEIYVD-HEPPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDTESPDYKR-----YY 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             D+         G+D +I+         V R+       + K+   +VL+  LV   RD
Sbjct: 478 PTDV------LVTGYD-IIFFW-------VSRMIFQGLEFTGKRPFKDVLIHGLV---RD 520

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    V+D+ G+D++R+ +    +  + L F   KV+        F 
Sbjct: 521 AQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN----FA 576

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
            +   A   ++       + +LD     + V             ++  L E    +    
Sbjct: 577 NKIWNASRFALMNMGGMTYEELDLS-GEKTVADHW---------ILTRLNETIETVTKLA 626

Query: 514 IAQEPYKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
              E  ++   LY     DL       +    E  +L    A+       R  L +    
Sbjct: 627 EKYEFGEVGRTLYNFIWDDLCD----WY---IEMAKLPLYGADEAAKKTTRSVLAY---- 675

Query: 569 IINSGLNII 577
           ++++ + ++
Sbjct: 676 VLDNTMRLL 684


>gi|261418346|ref|YP_003252028.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767695|ref|YP_004133196.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374803|gb|ACX77546.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112561|gb|ADU95053.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 880

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 99/331 (29%), Gaps = 65/331 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHRAVEAGRYEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRQ----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++  +L R+G +Y G         T+    D + +          +  PL  +DGS   
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRYPL--ADGS--- 214

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV     +   L+ ++V+L  
Sbjct: 215 --GCIEVATTRPET-------MLGD-----------TAVAVHPDDERYKHLIGKMVKLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            G  I +       I   +V  E GS +V+ 
Sbjct: 255 VGREIPI-------IADEYVDMEFGSGAVKI 278



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 108/308 (35%), Gaps = 58/308 (18%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y    PP       Q  D+        L   STM   DV+ P  K      Y+ 
Sbjct: 424 KETGEIYVDHEPPADIENWEQDPDVLDTWFSSALWPFSTMGWPDVESPDYKR-----YYP 478

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+         G+D +I+         V R+       + K+   +VL+  LV   RD 
Sbjct: 479 TDV------LVTGYD-IIFFW-------VSRMIFQGLEFTGKRPFKDVLIHGLV---RDA 521

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ +    V+D+ G+D++R+ +    +  + L F   KV+        F  
Sbjct: 522 QGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN----FAN 577

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLA---EYPRVIE 510
           +   A   ++       + +LD     + V         +E ++ +  LA   E+     
Sbjct: 578 KIWNASRFALMNMGGMTYEELDLS-GEKTVADHWILTRLNETIETVTKLAEKYEFGE--- 633

Query: 511 NATIAQEPYKLAFYLY-DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            A           +++ DL       +    E  +L     +       R  L +    +
Sbjct: 634 -AGRTLY-----NFIWDDLCD----WY---IEMAKLPLYGDDEAAKKTTRSVLAY----V 676

Query: 570 INSGLNII 577
           +++ + ++
Sbjct: 677 LDNTMRLL 684


>gi|297529198|ref|YP_003670473.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252450|gb|ADI25896.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 880

 Score = 64.2 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 99/331 (29%), Gaps = 65/331 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +            I     N TG +H+GH     + D +  +
Sbjct: 13  DHRAVEAGRYEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + ++ L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEEKLRQ----------QGLSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     L +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++  +L R+G +Y G         T+    D + +          +  PL  +DGS   
Sbjct: 160 REVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRYPL--ADGS--- 214

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV     +   L+ ++V+L  
Sbjct: 215 --GCIEVATTRPET-------MLGD-----------TAVAVHPDDERYKHLIGKMVKLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            G  I +       I   +V  E GS +V+ 
Sbjct: 255 VGREIPI-------IADEYVDMEFGSGAVKI 278



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 59/309 (19%), Positives = 108/309 (34%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G +Y     PPK     + D D     F S      TM   DV+ P  K      Y+
Sbjct: 424 KETGEIYVD-HEPPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDVESPDYKR-----YY 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             D+         G+D +I+         V R+       + K+   +VL+  LV   RD
Sbjct: 478 PTDV------LVTGYD-IIFFW-------VSRMIFQGLEFTGKRPFKDVLIHGLV---RD 520

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    V+D+ G+D++R+ +    +  + L F   KV+        F 
Sbjct: 521 AQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN----FA 576

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLA---EYPRVI 509
            +   A   ++       + +LD     + V         +E +  +  LA   E+    
Sbjct: 577 NKIWNASRFALMNMGGMTYEELDLS-GEKTVADHWILTRLNETIDTVTKLAEKYEFGE-- 633

Query: 510 ENATIAQEPYKLAFYLY-DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             A           +++ DL       +    E  +L     +       R  L +    
Sbjct: 634 --AGRTLY-----NFIWDDLCD----WY---IEMAKLPLYGDDEAAKKTTRSVLAY---- 675

Query: 569 IINSGLNII 577
           ++++ + ++
Sbjct: 676 VLDNTMRLL 684


>gi|305666031|ref|YP_003862318.1| isoleucyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710806|gb|EAR03038.1| isoleucyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 1133

 Score = 64.2 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 23/179 (12%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     +D
Sbjct: 641 GVDQTRGWFYTLHAIATMVFDSVAYKNVVSNGLV---LDKEGKKMSKRLGNAVDPFETMD 697

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           E G D+ R+ M+   N  + L FD   + E + K     Y  Y++         A     
Sbjct: 698 EHGPDATRWYMISNANPWDNLKFDIDGIVEVKRKFFGTLYNTYSFFALY-----ANIDEF 752

Query: 474 DLDFDLFPRNVIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYK----LAFYLYD 527
               D  P N  P+   +  SEL  LI         ++ A    EP +    ++ Y+ +
Sbjct: 753 SYAEDNIPLNERPEIDRWILSELHTLIKK-------VDEAYDDYEPTRAARAISDYVQE 804


>gi|157693210|ref|YP_001487672.1| valyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681968|gb|ABV63112.1| valine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 880

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 112/368 (30%), Gaps = 71/368 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K   +  + G  +            +     N TG +H+GH   + + D +  +
Sbjct: 13  DPNAIEKDRYTYWLEGKFFEAQNDKTKDPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             GV    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLREE----------GVSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  E   + EE                 IR     + +  D          G    +
Sbjct: 115 --KFVEETWKWKEE-------------YADFIRSQWAKMGLGLDYSRERFTLDEGLNKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +   L  +G +Y G         T+   +   +++++         R  L SDG+ + 
Sbjct: 160 RQVFVQLYEKGLIYRGEYIINWDPATKTA-LSDIEVIYKDVQGAFYHLRYPL-SDGTGS- 216

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV     +   L+ + V L  
Sbjct: 217 ----IEIATTRPET-------MLGD-----------TAVAVHPDDERYQHLIGKTVVLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENP 450
            G  I         I     VD E GS +V+       N   L    D  ++   +++  
Sbjct: 255 TGREI--------PIVADDYVDMEFGSGAVKITPAHDPNDFELGNRHDLERILVMNEDGT 306

Query: 451 --VFYVQY 456
                +QY
Sbjct: 307 MNANALQY 314



 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 29/237 (12%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R +   + V G D   +      +   +    +K   +VL+  L+   RD    KMSK
Sbjct: 473 FKRYYPTNLLVTGYD-IIFFWVSRMIFQGLEFTGEKPFKDVLIHGLI---RDEQGRKMSK 528

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             G+ I    V+D+ G+DS+R+ +    +  + L F F KV+                + 
Sbjct: 529 SLGNGIDPMEVIDKYGADSLRYFLATGSSPGQDLRFSFEKVESTWNF---------ANKI 579

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            +  R     F  ++ D    + +    E   ++  ++  L E    +       E  ++
Sbjct: 580 WNASR-----FALMNMDGLTYDELDLIGEKSVADQWILTRLNETIESVTQLADKYEFGEV 634

Query: 522 AFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 635 GRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|169829404|ref|YP_001699562.1| valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168993892|gb|ACA41432.1| Valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 881

 Score = 63.8 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        + G  +           +I     N TG +H+GH     + D L  +
Sbjct: 12  DPQSIEAGRYEWWLQGKFFEAQPESGKKPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRM 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L  ++                    
Sbjct: 72  KRMQGYDAL-------WLPGMDHAGIATQAKVEAKLREDNI------------------- 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L    ++  +     IRD    L +  D         +G    +
Sbjct: 106 ------TRYDLGREKFLEKTWEWK-EEYAGHIRDQWAKLGLGLDYTRERFTLDKGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G          +    D
Sbjct: 159 NTVFVQLYEKGLIYRGERIINWDPAAKTALSD 190



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 34/202 (16%)

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +VL+  LV   RDG   KMSK  G+ +    V+++ G+DS+R+ +               
Sbjct: 511 DVLIHGLV---RDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFL--------------- 552

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
               +  +P   ++Y   +  +++  +  I+    F L   + +  +    T E  +   
Sbjct: 553 ---ATGSSPGQDLRYTTEKVEAVWNFSNKIWNASRFALMNMDGMTYDEIDLTGEKSVADK 609

Query: 502 --LAEYPRVIENA---TIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKL 555
             L      IE         E  ++   LY+ +   F   +    E  +L     +    
Sbjct: 610 WILTRLNETIERVTSLAERYEFGEVGRELYNFIWDDFCSWY---IEMAKLPLYGEDEAAK 666

Query: 556 TMMRLQLVHAVASIINSGLNII 577
              R  L +    +++  + ++
Sbjct: 667 KTTRSILAY----VLDQTMRLL 684


>gi|323489964|ref|ZP_08095185.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396260|gb|EGA89085.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 877

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 95/332 (28%), Gaps = 67/332 (20%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      V    +        T   I     N TG +H+GH     + D +  +
Sbjct: 10  DPQSIEKGRYDWWVDQKFFEAKPESGKTPYTIVIPPPNVTGKLHLGHAWDTTLQDIMTRM 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L             G     +G+E 
Sbjct: 70  KRMQGFDAL-------WLPGMDHAGIATQAKVEGKLKEE----------GRSRYDLGRE- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W    KD         IR+    L +  D          G    +
Sbjct: 112 ---------AFLEESW--KWKDQYA----GHIREQWAKLGLGLDYSRERFTLDDGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R++   L  +  +Y G         TQ    D +                ++  D     
Sbjct: 157 REVFVKLYEKKLIYRGKYIINWDPNTQTAISDIE----------------VIHKD----- 195

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLY 392
                       +  F +M Y + +D SG+++        +  +    ++        L 
Sbjct: 196 -----------VKGAFYHMRYPL-ADGSGHIEVATTRPETMLGDTAVAVHPKDDRYKHLI 243

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
              + + +  R  + +   +V  E GS +V+ 
Sbjct: 244 GKKVILPIVGREIEIVADDYVDREFGSGAVKI 275



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 81/240 (33%), Gaps = 48/240 (20%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I    S        +        EK  + +VL+  LV   RD    KMSK  G+
Sbjct: 480 TGYD-IINFWVSR------MIFQALEFTGEKPFK-DVLIHGLV---RDAEGRKMSKSLGN 528

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    V+ + G+DS+R+ +    +    D  +   K +S  N          +  +  R
Sbjct: 529 GVDPMDVISQYGADSLRYFLATASSPGQ-DLRYSNDKVESVWNFA-------NKIWNASR 580

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-- 524
            A      + +D    +     ++           L      IE  T   E      Y  
Sbjct: 581 FALMNMEGMTYDQIDLSGKKSVADSWI--------LTRLNETIEQVTELAE-----RYEF 627

Query: 525 ------LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
                 LY+ +   F   +    E  +L     + R   M R  L +    ++++ + ++
Sbjct: 628 GEVGRSLYNFIWDDFCDWY---IEMSKLPLYGEDERAKKMTRSVLAY----VLDNTMRLL 680


>gi|184154735|ref|YP_001843075.1| glutamyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|238692944|sp|B2GAB3|SYE_LACF3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|183226079|dbj|BAG26595.1| glutamyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|299782846|gb|ADJ40844.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 498

 Score = 63.8 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 101/292 (34%), Gaps = 24/292 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    I     S     +  
Sbjct: 11  APSPTGHLHIGNARTALFNYLFAR--HNHGKFIIRIE-DTDTKRNIADGERSQLDNLKWM 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D    +G   G Y +   K++  +Y  EL++          K Y  +  ++  R+ 
Sbjct: 68  GLDWDEGPDKGGDFGPYRQSERKDIYAQYIQELMDKGL-----AYKSYMTEEELEAQRE- 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A    H +   E ++       I+   +    +G         PK +  +  D+ +  
Sbjct: 122 --AQKAAHQMPHYEYEYAGMSDDQIKAAQEAAEEKGLKPVIRFRVPKDEVFEWEDLVKGP 179

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F +  +G D    + K DG  TY FA  +     K    F       G DH     + 
Sbjct: 180 MSFEAQSIGGDF--VIQKRDGMPTYNFAVVIDDHLMKISHVFR------GDDHVSNTPKQ 231

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            A+  A+  K  +       +  +  +    K+SKR    +       ++G 
Sbjct: 232 MAIYQALGWKVPEFGH----MSLIINNETGKKLSKRDESVLQFIEQYRDLGY 279


>gi|311069301|ref|YP_003974224.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869818|gb|ADP33293.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 880

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 71/239 (29%), Gaps = 35/239 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPAAVEKDRYDFWLKGKFFEAKNDETKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +  +   +   EK+L     +  +   + IR     + +  D          G    +
Sbjct: 102 -REEGTSRYDLGREKFLEETWKWK-EEYAEFIRSQWAKMGLGLDYSRERFTLDEGLNKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           R++   L  +G +Y G         T+    D + +          +  PL  SDGS T
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSYPL--SDGSGT 216



 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 105/300 (35%), Gaps = 42/300 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G VY G L  PK     + D D     F S +     +  P + ++    Y+  D+ 
Sbjct: 424 KETGEVYVG-LEAPKDSENWEQDNDVLDTWFSSALWPFSTMGWPDITAEDFKRYYPTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   G+D +I+   S        +        E+  +  ++      L RD    K
Sbjct: 482 -----LVTGYD-IIFFWVSR------MIFQGIEFTGERPFKDVLIHG----LIRDEQGRK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+               
Sbjct: 526 MSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLRFSYEKVESTWNF---------A 576

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            +  +  R     F  ++ D    + +    E   ++  ++  L E    +       E 
Sbjct: 577 NKIWNASR-----FALMNMDGMTYDELDLSGEKTVADKWILTRLNETIESVTQLADKYEF 631

Query: 519 YKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            ++  +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 632 GEVGRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|156538378|ref|XP_001605330.1| PREDICTED: similar to AT12688p [Nasonia vitripennis]
          Length = 448

 Score = 63.8 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 12/186 (6%)

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDF-DFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                + ++   SV   +L  K+   +   +F  + +  KE    Y+ Y   R  ++  +
Sbjct: 266 NSEEDIKKIADASVSHELLSTKHISTVMLKNFDNIDKSVKEGS--YILYNNVRMNAVLDK 323

Query: 468 AKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEP------Y 519
              +    +    P    +      D  E  L   ++ +YP V+  AT+   P      +
Sbjct: 324 YAQLLLKGEIPQIPEVENLFTFLTLDIEEWNLFYNYIIKYPDVL-KATVTFHPKLNVNVH 382

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
            L  ++ +L   F  ++   R         +   +L   RL L+ ++  I+ + L ++ V
Sbjct: 383 LLWSFVSNLCHEFSRYYEKNRFLMPNPTFDSRISELCSERLHLLRSLRIILRNSLALLEV 442

Query: 580 ESPNEM 585
           +    M
Sbjct: 443 KEVQYM 448


>gi|126653698|ref|ZP_01725617.1| valyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589735|gb|EAZ83870.1| valyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 881

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        + G  +           +I     N TG +H+GH     + D L  +
Sbjct: 12  DPQSIEAGRYEWWLQGKFFEAQPESGKEPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRM 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L  ++                    
Sbjct: 72  KRMQGYDAL-------WLPGMDHAGIATQAKVEAKLREDNI------------------- 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L    ++  +     IRD    L +  D         +G    +
Sbjct: 106 ------TRYDLGREKFLEKTWEWK-EEYAGHIRDQWAKLGLGLDYTRERFTLDKGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G          +    D
Sbjct: 159 NTVFVQLYEKGLIYRGERIINWDPAAKTALSD 190



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 34/202 (16%)

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +VL+  LV   RDG   KMSK  G+ +    V+++ G+DS+R+ +               
Sbjct: 511 DVLIHGLV---RDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFL--------------- 552

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
               +  +P   ++Y   +  +++  +  I+    F L   + +  +    T E  +   
Sbjct: 553 ---ATGSSPGQDLRYTTEKVEAVWNFSNKIWNASRFALMNMDGMTYDEIDLTGEKSVADK 609

Query: 502 --LAEYPRVIENA---TIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKL 555
             L      IE         E  ++   LY+ +   F   +    E  +L     +    
Sbjct: 610 WILTRLNETIERVTSLAERYEFGEVGRELYNFIWDDFCSWY---IEMAKLPLYGEDETAK 666

Query: 556 TMMRLQLVHAVASIINSGLNII 577
              R  L +    +++  + ++
Sbjct: 667 KTTRSILAY----VLDQTMRLL 684


>gi|194017123|ref|ZP_03055735.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010991|gb|EDW20561.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 880

 Score = 63.4 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 112/367 (30%), Gaps = 69/367 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K   +  + G  +            +     N TG +H+GH   + + D +  +
Sbjct: 13  DPNAIEKDRYTYWLEGKFFEAQNDKTKDPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             GV    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLREE----------GVSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+      + EE                 IR     + +  D          G    +
Sbjct: 115 --KFVEGTWKWKEE-------------YADFIRSQWAKMGLGLDYSRERFTLDEGLNKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +   L  +G +Y G         T+   +   +++++         R  L SDG+ + 
Sbjct: 160 RQVFVQLYEKGLIYRGEYIINWDPATKTA-LSDIEVIYKDVQGAFYHLRYPL-SDGTGS- 216

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV     +   L+ + V L  
Sbjct: 217 ----IEIATTRPET-------MLGD-----------TAVAVHPDDERYQHLIGKTVVLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENP- 450
            G  I +       +   +V  E GS +V+       N   L    D  ++   +++   
Sbjct: 255 TGREIPI-------VADDYVDIEFGSGAVKITPAHDPNDFELGNRHDLERILVMNEDGTM 307

Query: 451 -VFYVQY 456
               +QY
Sbjct: 308 NANALQY 314



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 29/237 (12%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R +   + V G D   +      +   +    +K   +VL+  L+   RD    KMSK
Sbjct: 473 FKRYYPTNLLVTGYD-IIFFWVSRMIFQGLEFTGEKPFKDVLIHGLI---RDEQGRKMSK 528

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             G+ I    V+D+ G+DS+R+ +    +  + L F F KV+                + 
Sbjct: 529 SLGNGIDPMEVIDKYGADSLRYFLATGSSPGQDLRFSFEKVESTWNF---------ANKI 579

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            +  R     F  ++ D    + +    E   ++  ++  L E    +       E  ++
Sbjct: 580 WNASR-----FALMNMDGLTYDELDLTGEKSVADQWILTRLNETIESVTQLADKYEFGEV 634

Query: 522 AFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             +LY+ +   F   +    E  +L     +       R  L +    +++  + ++
Sbjct: 635 GRHLYNFIWDDFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VLDQTMRLL 684


>gi|172058142|ref|YP_001814602.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990663|gb|ACB61585.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 878

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    +      + G  +  +   +     I     N TG +H+GH     + D L  +
Sbjct: 11  DPQATEEKWYDFWMKGEYFKADQDPEKAPYTIVIPPPNVTGKLHLGHAWDTTLQDMLTRM 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++V   Y        ++   ++   + +Q L                        
Sbjct: 71  KRMQGFDVL--YLPG-----MDHAGIATQAKVEQKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   L    EK+L     +  +     IR+    L +  D          G    +
Sbjct: 100 -RAEGKSRLEMGREKFLEQSWAWK-EEYASTIREQWSKLGLGLDYSRERFTLDEGLSEAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++   L  +G +Y G         T+    D
Sbjct: 158 QEVFVKLYEKGLIYRGEYIVNWDPATKTAISD 189


>gi|323141392|ref|ZP_08076283.1| glutamate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322414141|gb|EFY04969.1| glutamate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 491

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 94/277 (33%), Gaps = 28/277 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA     +G ++       D          ++    +  
Sbjct: 11  APSPTGPFHIGGARSALFNYLLAR---KTGGKLILRIEDTDRERSTPESEENIKAALKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  +  G   G Y +    ++  KY+ +LL   +  +     +   +    +I++ 
Sbjct: 68  GMDWDEGVDVGGPNGPYHQMERLDIYKKYTDKLLAEGKAYYCYCTDEELEKERQSLIKEG 127

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                +     ++E+             I     +G         P  K     DM R  
Sbjct: 128 KMPRYMGKCRHLTEEQ------------IAQFKAEGRKPTVRFRVPADKQILVRDMVRGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           ++F S  +GD     ++KSDG  TY   + A           ++I     +H     R  
Sbjct: 176 VVFDSNNIGDF---VIVKSDGIPTY---NYAVVIDDALMHITHVIR--AEEHLSNTPRQC 227

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            V  A+  K+          + L       KMSKR G
Sbjct: 228 LVYDALGFKQPTFGH-----ISLILGKDHTKMSKRHG 259


>gi|207111174|ref|ZP_03245336.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 62

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 42/61 (68%)

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           AG+FI ++ V+D+VG D++RF+ L ++    L+FD   +K+Q   NP++Y+ YA +R  +
Sbjct: 2   AGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIYYIHYANSRIHT 61

Query: 464 I 464
           +
Sbjct: 62  M 62


>gi|317129810|ref|YP_004096092.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474758|gb|ADU31361.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 880

 Score = 62.6 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 62/228 (27%), Gaps = 37/228 (16%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           +++  I+          P           V+G  +            I     N TG +H
Sbjct: 1   MENKEISMPP----KYDPQSTEAKWYPFWVNGKFFEATGDENKKPYTIVIPPPNVTGKLH 56

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH     + D L  +    GY+             ++   ++   + +  L        
Sbjct: 57  LGHAWDTTLQDILIRVKRMQGYDAL-------WLPGMDHAGIATQAKVEGKL-------- 101

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
                             +      +   EK++    ++  +   + IR     L +  D
Sbjct: 102 -----------------REEGVSRYDLGREKFIEKSWEWK-EEYAETIRQQWSKLGLSLD 143

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                     G    ++++   L  +G +Y G         T+    D
Sbjct: 144 YSRERFTLDEGLSDAVKEVFVRLYEEGLIYRGEYIINWDPQTKTALSD 191



 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 26/170 (15%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G   P   +  ++ D D     F S +     +  P  ++     Y++ D+ 
Sbjct: 424 KETGELYVGRTAPEDIENWEQ-DEDVLDTWFSSALWPFSTMGWPNQEAPDFKRYYSTDV- 481

Query: 340 YFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                   G+D +IY   +       +             ++   +VL+  LV   RD  
Sbjct: 482 -----LVTGYD-IIYFWVARMIFQGLHFT----------NERPFKDVLIHGLV---RDAE 522

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
             KMSK  G+ +    V+D+ G+D++RF +    +  + L F + KV+  
Sbjct: 523 GRKMSKSLGNGVDPMDVIDKYGADALRFFLSTGSSPGQDLRFYWEKVESN 572


>gi|323701662|ref|ZP_08113334.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533435|gb|EGB23302.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 514

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 72/462 (15%), Positives = 152/462 (32%), Gaps = 92/462 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I         R  +A   
Sbjct: 15  PSDKLHIGHAYTTVAADAMARFKRLTGYDVWFLTGSDEHGQKIE--------RAAKAKNQ 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
              +  +    G        +++    ++ +   +E+   +V+    Q      I + + 
Sbjct: 67  TPKEYVDHIVDGFKKLWSRLDVS---YNDFIRTTDERHRKVVQQIFQQLYDQGDIYKSEY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +       + F +E     G     +  ++ +  + Y +                    +
Sbjct: 124 EGWYCTPCETFFTEYQLVEGKCPDCQREVEKVREESYFFR--------------QSKYAE 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG----FD--NMIYVM--- 356
              +      D  +P+ + +   ++      DL   +  ++ G    FD  +++YV    
Sbjct: 170 RWLKFIEENPDFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIPVPFDPKHVVYVWVDA 229

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D S Y K   A    V +   + + ++  ++ +  +           
Sbjct: 230 LTNYISALGYGSEDDSLYRKFWPADIHLVGKDIVRFHTIIWPIMLMALNLPLPKKVIGHG 289

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                  KMSK  G+ +    +VD+ G D+VR+ +L             +   + + N  
Sbjct: 290 WLLLDSGKMSKSKGNVVDPHTLVDKYGVDAVRYFLLRELPFGSDGLYSEEALVK-RINTD 348

Query: 452 FYVQYAYARCRS--IFRQAKD---------IFPDLDFDLFPRNVIPQESEF-DTSE---- 495
               Y     RS  + ++ ++           PD +      N     +E+ D SE    
Sbjct: 349 LANDYGNLLSRSATMVQKYQEGVLQAPGPAAGPDAELIDLAINTPKLVAEYMDKSEISNA 408

Query: 496 ----LQLIVHLAEYPRVIENA----TIAQEPYKLAFYLYDLA 529
                QL+    +Y    E A      A +P +L   LY++A
Sbjct: 409 LAAIWQLVGRANKYLE--ETAPWSLAKAGQPERLNTVLYNVA 448


>gi|313606681|gb|EFR83427.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 38

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 22/38 (57%)

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +  +N ++T  RL L+      + +GL ++GV +P +M
Sbjct: 1   LDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 38


>gi|323140721|ref|ZP_08075640.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322414739|gb|EFY05539.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 911

 Score = 61.9 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 110/376 (29%), Gaps = 74/376 (19%)

Query: 85  GKG-FI---NLYL----------SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
           G+G FI   N ++           P+ + K           +   +       +I     
Sbjct: 16  GQGLFILRRNFFMCEEHNIPKVYDPASVEKKWYKFWEEHRYFHAEVEEGKDAFSIVIPPP 75

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQA 188
           N TG +H+GH     + D L       G+        + AG   QI              
Sbjct: 76  NITGQLHMGHALDNTLQDILIRWHRMMGHNTLWMPGYDHAGLATQI-------------- 121

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                               V + +  +      +   E++L  V ++  Q   +II   
Sbjct: 122 -------------------KVEEVIKKEEGKTRYDLGREEFLKRVWEWKEQYGDRIINQ- 161

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQ 300
           LK L +  D          G    +R++   L  +G +Y+G              S    
Sbjct: 162 LKHLGVSCDWERKRFTMDEGCSKAVREVFCTLFEKGLIYKGTRITNWCVNCNTALSDIEV 221

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF----------- 349
           +   D   L + +  V ++  R L+ +         D A      +  +           
Sbjct: 222 EHKDDPGHLWYINYPVVEEEGRSLMIATTRPETLPGDTAVAVNPEDPRYGDLVGKTLRLP 281

Query: 350 --DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL-CELVRLYRDGMPIKMSKRAGD 406
             D +I ++   +        AV    S       + +   L  +   GM   M+K AG 
Sbjct: 282 TTDRIIPIIADSYVDTKFGTGAVKITPSHDPNDYEMGIRHNLPSIVVIGMDGIMTKEAGK 341

Query: 407 F--ITLRHVVDEVGSD 420
           +  +T       + +D
Sbjct: 342 YEGMTREECRKAIVAD 357


>gi|228965171|ref|ZP_04126265.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228794405|gb|EEM41917.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
          str. T04001]
          Length = 72

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 6  DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65
          D+  +    L  I      +K+ILD  +IE P+    G  +      L++     P  IA
Sbjct: 2  DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGDAAF-PCFSLAKKYKKAPAIIA 58

Query: 66 ELIVARI 72
          + +  ++
Sbjct: 59 KEVAEKL 65


>gi|207109120|ref|ZP_03243282.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 76

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGF 88
          P+D  HGH +T  A  L++     PL IAE +  +I        +F   +A KG+
Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGY 76


>gi|328776301|ref|XP_001121768.2| PREDICTED: hypothetical protein LOC725987 [Apis mellifera]
          Length = 410

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 71/192 (36%), Gaps = 18/192 (9%)

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP--VFYVQYAYARCRS 463
           +  T  +  +++   +  F +L  K S  +        +++  N     ++ Y  AR  +
Sbjct: 225 NTETENNFFEDLAKATSTFELLSVKPSRPVFIGCNFATDKNTTNTKGACFILYNIARIIA 284

Query: 464 IFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATI-----AQ 516
           I  +        ++   P  N I         E +LI + +  Y +++++          
Sbjct: 285 IIEKYNHKRLKGEYPNLPHMNDIDFSLLKQEEEWELIYNFIIGYQQMLKDCLKYDPIFQV 344

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSG 573
            P  +  +L  L   F  ++       R+R +      L      RL ++HA+  ++ + 
Sbjct: 345 NPQVICIFLAKLCQKFSIYY------RRIRILTEAYDHLIPTMSARLYMLHALQIVLQNA 398

Query: 574 LNIIGVESPNEM 585
           L +I +   + M
Sbjct: 399 LALIDIIPVSRM 410


>gi|126336010|ref|XP_001377689.1| PREDICTED: similar to DALR anticodon binding domain containing 3
           [Monodelphis domestica]
          Length = 553

 Score = 61.5 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 24/183 (13%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            ++  + S +V+F ML   +   +  D       +K      +V Y  AR  ++F   + 
Sbjct: 370 EIIGALTSAAVKFEMLSTAHRSQMSLDLEDTSVSTKGTKSGAFVMYNCARLATLFDGYQR 429

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQEPYK-------- 520
                 +  FP  + +      +  E  L+ + +  +P V+  +    +  +        
Sbjct: 430 GVEQGLYPAFPDVSELDFSLLREEGEWLLLFNGIIPFPEVLSQSAQ-LQVSRPGIRIIAN 488

Query: 521 ---LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGL 574
              +  +L  L+  F  +++      R+  +      L      RLQL+ AV  + +S L
Sbjct: 489 TEAVCKFLVHLSMDFSSYYN------RVHILGEPRPHLFGQMFARLQLMRAVQEVFHSAL 542

Query: 575 NII 577
             +
Sbjct: 543 ATL 545


>gi|228989246|ref|ZP_04149239.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228770456|gb|EEM19027.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 660

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 117/349 (33%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKKAEELQVT------- 69

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D   + + KI +  +  
Sbjct: 70  ----------PQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKEVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G    G   P      +    +     F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIME-GDKVVGGKSPDSGHAVELVREESY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF----- 349
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGN 231

Query: 350 -DNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+D+   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|297584302|ref|YP_003700082.1| valyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142759|gb|ADH99516.1| valyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 879

 Score = 61.1 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 100/358 (27%), Gaps = 67/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+          V G  +            I     N TG +H+GH     + D L  +
Sbjct: 12  DPAATEAKWYDYWVKGKYFEATGDKNKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILIRV 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             GV    +G+E 
Sbjct: 72  KRMQGYDAL-------WLPGMDHAGIATQAKVEGKLREE----------GVSRHDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E+ W         +     IR     + +  D          G    +
Sbjct: 114 ---------KFLEQSWA------WKEEYAGFIRSQWAKMGLSLDYSKERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           +++   L  +G +Y G         T+    D + +          +  PL   +GS   
Sbjct: 159 KEVFVRLYEEGLIYRGEYIINWDPDTKTALSDIEVIYKDVQGAFYHMRYPLADGEGS--- 215

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV  K  +   L+ + V L  
Sbjct: 216 ----IEIATTRPET-------MLGD-----------TAVAVHPKDERYQHLIGKKVILPI 253

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKEN 449
            G       R  + +   +V  E GS +V+       N   +    D  +V    +  
Sbjct: 254 VG-------REIEIVADDYVDMEFGSGAVKITPAHDPNDFEIGNRHDLERVLVMDEGG 304



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +IY   +       +            E++   +VL+  LV   RD    KMSK 
Sbjct: 483 TGYD-IIYFWVARMIFQGQHFT----------ERRPFKDVLIHGLV---RDSEGRKMSKS 528

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ +    V+D+ G+D++RF +         L F + KV
Sbjct: 529 LGNGVDPMDVIDKYGADALRFFLSTGSTPGNDLRFFWEKV 568


>gi|329928481|ref|ZP_08282349.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937740|gb|EGG34148.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 889

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 70/269 (26%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +        G  +            I     N TG +H+GH     + D L 
Sbjct: 15  TYDPKAAEQKWYPYWKEGGFFEAGKRPDAEPYTIVIPPPNVTGMLHIGHALDFTLQDILI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    GY+                                   LP   + G+  +   +
Sbjct: 75  RVKRMQGYDAL--------------------------------WLPGSDHAGIATQTKVE 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++        IRD    + +  D          G   
Sbjct: 103 QKLREEGVTRYDLGREKFLEKVWEWK-DLYANTIRDQWSKIGLSLDYSRERFTLDEGLSE 161

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L  +G +Y G          +    D +            +  PL    GS 
Sbjct: 162 AVREVFVKLYDKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGHLYHLQYPLKDGSGSI 221

Query: 332 TYFAA-------DLAYFKCKYERGFDNMI 353
           T           D A      +  + +MI
Sbjct: 222 TVATTRPETMLGDTAVAVHPEDERYKDMI 250



 Score = 37.6 bits (86), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           L RD    KMSK  G+ I    V+++ G+D++R+M+       + L F + +V++   
Sbjct: 526 LVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRWERVEQARN 583


>gi|90962222|ref|YP_536138.1| glutamyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891228|ref|ZP_04009033.1| glutamyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|123391339|sp|Q1WSS4|SYE_LACS1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|90821416|gb|ABE00055.1| Glutamyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227867102|gb|EEJ74523.1| glutamyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214883|gb|ADJ79299.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 495

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R    +   
Sbjct: 1   MAKNKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTFVLRIEDTDTKR-NIADGEK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q++ L     W         D     G Y     K + K L  +   + L +       
Sbjct: 59  SQMDNL----EWLGIDWDEGPDKPGKYGPYRQSERKDIYKPLIQELLDKDLAYE------ 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +  +  ++  R++ KA   +   ++ E  +       I+   D    +G      +
Sbjct: 109 ---SFMTEEELQAQREEQKARG-EAPRYVYE--YEGMSKEEIKKAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P +KT +  D+ + ++ F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 RVPHNKTYEWDDIVKGKISFLSDTIGGDF--VIQKRDGMPTYNFAVV------VDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A   K  +   +   +          K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFGWKAPEFGHMSLIINTE----TGKKLSKRDETVLQF 270

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 271 IEQYRELGY 279


>gi|301299853|ref|ZP_07206087.1| glutamate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852524|gb|EFK80174.1| glutamate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 495

 Score = 61.1 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R    +   
Sbjct: 1   MAKNKIRVRY-APSPTGHLHIGNARTALFNCLFARHNKGTFVLRIEDTDTKR-NIADGEK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q++ L     W         D     G Y     K + K L  +   + L +       
Sbjct: 59  SQMDNL----EWLGIDWDEGPDKPGKYGPYRQSERKDIYKPLIQELLDKDLAYE------ 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +  +  ++  R++ KA   +   ++ E  +       I+   D    +G      +
Sbjct: 109 ---SFMTEEELQAQREEQKARG-EAPRYVYE--YEGMSKEEIKKAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P +KT +  D+ + ++ F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 RVPHNKTYEWDDIVKGKISFLSDTIGGDF--VIQKRDGMPTYNFAVV------VDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A   K  +   +   +          K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFGWKTPEFGHMSLIINTE----TGKKLSKRDETVLQF 270

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 271 IEQYRELGY 279


>gi|332978083|gb|EGK14821.1| valine--tRNA ligase [Desmospora sp. 8437]
          Length = 884

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 65/236 (27%), Gaps = 33/236 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    +      + G  +            I     N TG +H+GH     + D L   
Sbjct: 13  DPKRAEEKWYDYWLEGGFFQAGKNPDQEPFTIVIPPPNVTGNLHIGHALDTTLQDILIRW 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+              +   ++   R +  L                        
Sbjct: 73  KRMEGYDAL-------WLPGTDHAGIATQARVEAHL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +  +       EK+   V ++  +   ++IR   + L +  D          G    +
Sbjct: 102 -REEGASRHELGREKFQEKVWEWK-EHYAQVIRKQWRKLGLSLDYSRERFTMDEGLSRAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           R++   L  +G +Y G          +    D + +          ++ PL + +G
Sbjct: 160 REVFVRLYEKGLIYRGKYIINWDPAARTALSDIEVIHKEVEGKLYHMNYPLKQGNG 215



 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 85/238 (35%), Gaps = 44/238 (18%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +IY         V R+   A   +  K   NVL+  LV   RD    KMSK  G+
Sbjct: 488 TGYD-IIYFW-------VARMIFTALEFTGSKPFKNVLIHGLV---RDAEGRKMSKSLGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            +    V+++ G+D++RFM+         + F + +V+                +  +  
Sbjct: 537 GVDPMEVIEKYGADAIRFMLSTGITPGNDMRFRWERVESARNF---------ANKIWNAS 587

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R     F  +  D      +  + +  T++  ++  L      ++  T +        Y 
Sbjct: 588 R-----FALMHLDGVETGELTLDGQLSTADRWILHRL---NETVDRVTRSLN-----RYD 634

Query: 526 YDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +  A   ++H  W        E  +L     +       R  L    A +++  L ++
Sbjct: 635 FGEAGQALYHFIWDELCDWYIEFAKLPLYGDDEEARRSTRAVL----AHVLDHSLRLL 688


>gi|308174506|ref|YP_003921211.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607370|emb|CBI43741.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554425|gb|AEB24917.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912829|gb|AEB64425.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 880

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPSAIEKGRYDFWLKGKYFEAGGDQTKQPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLRE----------QGTSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     + +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLNKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L  +G +Y G         T+    D
Sbjct: 160 REVFVKLYEKGLIYRGEYIINWDPATKTALSD 191



 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 88/245 (35%), Gaps = 45/245 (18%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R +   + V G D   +      +   +    ++   +VL+  L+   RD    KMSK
Sbjct: 473 FKRYYSTDVLVTGYD-IIFFWVSRMIFQGLEFTGERPFKDVLIHGLI---RDEQGRKMSK 528

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +    V+D+ G+DS+R+ +                   +  +P   ++++Y +  
Sbjct: 529 SLGNGVDPMDVIDKYGADSLRYFL------------------ATGSSPGQDLRFSYEKVE 570

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENA---TIAQE 517
           S +  A  I+    F L   + +  +    + E  +     L      IE+        E
Sbjct: 571 STWNFANKIWNASRFALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEDVTQLADRYE 630

Query: 518 PYKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             ++  +LY     D+       +    E  +L     +       R  L +    +++ 
Sbjct: 631 FGEVGRHLYNFIWDDVCD----WY---IEMAKLPLYGEDEAAKKTTRSVLAY----VLDQ 679

Query: 573 GLNII 577
            + ++
Sbjct: 680 TMRLL 684


>gi|309804780|ref|ZP_07698844.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165890|gb|EFO68109.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 879

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRHQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|312871640|ref|ZP_07731732.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311092865|gb|EFQ51217.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 879

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRHQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|312873260|ref|ZP_07733316.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091271|gb|EFQ49659.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 879

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRHQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|261405376|ref|YP_003241617.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281839|gb|ACX63810.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 889

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 70/269 (26%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +        G  +            I     N TG +H+GH     + D L 
Sbjct: 15  TYDPKAAEQKWYPYWKEGGFFEAGKRPDAEPYTIVIPPPNVTGMLHIGHALDFTLQDILI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    GY+                                   LP   + G+  +   +
Sbjct: 75  RVKRMQGYDAL--------------------------------WLPGSDHAGIATQTKVE 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++        IRD    + +  D          G   
Sbjct: 103 QKLREEGVTRYDLGREKFLEKVWEWK-DLYANTIRDQWSKIGLSLDYSRERFTLDEGLSE 161

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L  +G +Y G          +    D +            +  PL    GS 
Sbjct: 162 AVREVFVKLYDKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGHLYHLQYPLKDGSGSI 221

Query: 332 TYFAA-------DLAYFKCKYERGFDNMI 353
           T           D A      +  + +MI
Sbjct: 222 TVATTRPETMLGDTAVAVHPEDERYKDMI 250



 Score = 37.6 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           L RD    KMSK  G+ I    V+++ G+D++R+M+       + L F + +V++   
Sbjct: 526 LVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRWERVEQARN 583


>gi|89098946|ref|ZP_01171826.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086350|gb|EAR65471.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 880

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 107/359 (29%), Gaps = 67/359 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      +    +            I     N TG +H+GH     + D L  +
Sbjct: 13  DPQNIEKGRYEWWIGNKFFEAKDDQSKEPYTIVIPPPNVTGRLHLGHAWDTTLQDILTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +Q L +           G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEQKLKSE----------GKSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
              +  E   + EE                 IR     L +  D          G    +
Sbjct: 115 --AFVQETWKWKEE-------------YADHIRQQWSKLGLGLDYSRERFTMDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
             +  +L ++G +Y G         T+    D + +          ++ PL  +DGS + 
Sbjct: 160 NKVFVSLYKKGLIYRGEYIINWDPATKTALSDIEVIHQDVQGAFYHMNYPL--ADGSGS- 216

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +     + E        ++G             A AV  +  +   L+ + V L  
Sbjct: 217 ----IEVATTRPET-------MLGD-----------TAVAVHPEDERYQHLIGKNVVLPI 254

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENP 450
            G  I +       +   +V  E GS +V+       N   +    D  ++   +++  
Sbjct: 255 TGREIPI-------VADDYVDKEFGSGAVKITPAHDPNDFEIGNRHDLPRILVMNEDGT 306



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 60/307 (19%), Positives = 107/307 (34%), Gaps = 56/307 (18%)

Query: 281 ARQGYVYEGILPPPKSK-TTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY    PP  ++  TQ  D+        L   STM   D + P    D    Y  
Sbjct: 424 KETGEVYVDSEPPADAENWTQDNDVLDTWFSSALWPFSTMGWPDEENP----DFKRYYPT 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           A L         G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 480 ASLVT-------GYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 521

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ +    V+ + G+DS+R+ +    +  + L F   KV+        F  
Sbjct: 522 QGRKMSKSLGNGVDPMDVIAQYGADSLRYFLSTGSSPGQDLRFSMEKVEATWN----FAN 577

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           +   A   ++   A   F D+D             E   ++  ++  L E    +   + 
Sbjct: 578 KIWNASRFALMNMAGLKFEDIDLT----------GEKSVADKWILTRLNETIETVTRLSD 627

Query: 515 AQEP----YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             E       L  +++D    F   +    E  +L     +       R  L +    ++
Sbjct: 628 RYEFGEVGRVLYNFIWD---DFCDWY---IEMAKLPLYGEDEAAKKTTRSILAY----VL 677

Query: 571 NSGLNII 577
           ++ + ++
Sbjct: 678 DNTMRLL 684


>gi|228995429|ref|ZP_04155099.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764290|gb|EEM13167.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 660

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I   A  +    Q  + N
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKKAEELQVTSQAYVDN 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             + + E             E  D    + +   E++   +V+        KI +  +  
Sbjct: 77  IVAGIKEL-----------WEKMDISYDDFIRTTEDRHKEVVE--------KIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G    G   P      +    +     F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIME-GDKVVGGKSPDSGHAVELVREESY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF----- 349
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGN 231

Query: 350 -DNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+D+   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|251796284|ref|YP_003011015.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543910|gb|ACT00929.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 663

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 108/335 (32%), Gaps = 57/335 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V      ++ G +I         R  +    
Sbjct: 17  PSDKLHIGHAYTTVAGDAMARYKRLRGYDVWYLTGTDEHGQKIE--------RNAKDKNK 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           +     +    G+       E++   + + +   E +    V+    Q +    I + + 
Sbjct: 69  SPQQFVDDIVVGIKELWSKLEIS---NDDFIRTTEPRHKEAVEKIFAQLLKQDDIYKGEY 125

Query: 250 KALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGILP 292
           +       + F  E     G+                   +    D L +        + 
Sbjct: 126 EGWYCTPCESFFLERQLVNGNCPDCGRPVELVKEESYFFRMSKYADRLLKHYEENPDFIQ 185

Query: 293 PPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           P   K            +   + R    +   + GD      +  D    Y  A L Y K
Sbjct: 186 PESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALSNYITA-LGYGK 244

Query: 343 CKYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
                 +D      ++++G +    H+ Y      +  A+     +  V     + L +D
Sbjct: 245 EGSSDLYDRFWPADVHLVGKEIVRFHTIY---WPIMLMALGLPLPK-KVFAHGWL-LMKD 299

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           G   KMSK  G+ +    ++D  G D+VR+ +L  
Sbjct: 300 G---KMSKSKGNVVDPVTLIDRYGLDAVRYYLLRE 331


>gi|315653725|ref|ZP_07906645.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325913051|ref|ZP_08175424.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|315489087|gb|EFU78729.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325477731|gb|EGC80870.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 879

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRHQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|259501662|ref|ZP_05744564.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191130|ref|ZP_07267384.1| valyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806332|ref|ZP_07700345.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309807726|ref|ZP_07701660.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809959|ref|ZP_07703807.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871976|ref|ZP_07732058.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874665|ref|ZP_07734689.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921098|ref|ZP_08277621.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259166947|gb|EEW51442.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167316|gb|EFO69482.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308168986|gb|EFO71070.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169747|gb|EFO71792.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089895|gb|EFQ48315.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311092553|gb|EFQ50915.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935005|gb|EGG31494.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 879

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRHQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|309803196|ref|ZP_07697293.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164704|gb|EFO66954.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 879

 Score = 60.7 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRHQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|325911674|ref|ZP_08174081.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476440|gb|EGC79599.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 879

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   DPRAVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + ++ L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEEKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     + +  D          G    +
Sbjct: 98  -RKQGQDRYQLGREKFIKQVWDWK-DEYASIIKSQWGKMGLSLDYSRERFTLDDGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D + +          ++ PL  +DG+
Sbjct: 156 RKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL--ADGT 210


>gi|324328361|gb|ADY23621.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 881

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGMSRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|120577571|gb|AAI30128.1| LOC100037020 protein [Xenopus laevis]
          Length = 548

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 68/181 (37%), Gaps = 18/181 (9%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQ-A 468
             ++  + S +++F M+   +   +  D       +K      +V Y  AR  ++F   +
Sbjct: 364 EEIIMGLASAAIKFEMMSTAHRSQVTLDLEDTNITTKGTKSGAFVMYNCARLATMFESYS 423

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATI--AQEPYK----- 520
             +   L  +  P   +   +  +  E  L+  ++  +P V+  +       P       
Sbjct: 424 SAVRKALYPEFPPAGDLNYSTLREEGEWLLLFNYILTFPEVLSQSAQISLSSPGIRVTAN 483

Query: 521 ---LAFYLYDLASVFHGHWSHGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
              +  +L +L+  F  +++        L  +          RLQL+ A+ S+++S L  
Sbjct: 484 TEAVCKFLVNLSMDFSSYYNRVHILGEPLSHLFGQ----MFSRLQLMKAIESVLHSALET 539

Query: 577 I 577
           +
Sbjct: 540 L 540


>gi|213023067|ref|ZP_03337514.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 70

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             + N   Y+QYAY R  S+FR+A     D+D        +      +  E QL   L +
Sbjct: 3   AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPV---IISEDREAQLAARLLQ 54

Query: 505 YPRVIENATIAQEPYK 520
           +   +        P+ 
Sbjct: 55  FEETLTVVAREGTPHV 70


>gi|229123998|ref|ZP_04253190.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228659300|gb|EEL14948.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 881

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|49478642|ref|YP_038508.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394711|sp|Q6HD68|SYV_BACHK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49330198|gb|AAT60844.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 881

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I+  ++ +  ++D   F    +  E       +     L      IE+ T   + 
Sbjct: 575 NFINKIWNASRFVLMNMDDMKFEEIDLTGEKSVADKWI-----LTRLNETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILSY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|266625214|ref|ZP_06118149.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862891|gb|EFC95189.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 417

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 33/243 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    +    +            I     N TG +H+GH     + D L   
Sbjct: 9   NPAEIEGKLYQKWLDKKYFHAEPNPDKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                           +AL+   +D          ++ + K+ 
Sbjct: 69  KRMQGY---------------------------EALWQPGTDHAAIATEVKVIESLKKQG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK      +   + +L    D+  +   +II   L  +    D          G    +
Sbjct: 102 IDKE-----DLGRDGFLEKCWDWRKEYGGRIINQ-LHKMGSSADWDRERFTMDEGCSEAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           +++   L  +GY+Y+G          Q    D +            ++ P++  +GS+  
Sbjct: 156 QEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVDQDGFFWHINYPVVGEEGSFVE 215

Query: 334 FAA 336
            A 
Sbjct: 216 IAT 218


>gi|206969837|ref|ZP_03230791.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218233729|ref|YP_002369265.1| valyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229071967|ref|ZP_04205177.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206735525|gb|EDZ52693.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218161686|gb|ACK61678.1| valine--tRNA ligase [Bacillus cereus B4264]
 gi|228711126|gb|EEL63091.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 881

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|30022546|ref|NP_834177.1| valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048175|ref|ZP_04193744.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111929|ref|ZP_04241473.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504949|ref|YP_003666649.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433513|sp|Q817R6|SYV_BACCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29898104|gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228671493|gb|EEL26793.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723162|gb|EEL74538.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326001|gb|ADH08929.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 881

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|298489726|ref|YP_003719903.1| DALR anticodon-binding domain-containing protein ['Nostoc azollae'
           0708]
 gi|298231644|gb|ADI62780.1| DALR anticodon binding domain protein ['Nostoc azollae' 0708]
          Length = 306

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 59/163 (36%), Gaps = 40/163 (24%)

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIF----PDLDFDL---FPRNVIP------QESEF 491
           ++K+   F VQYA+ARC S+ R A         D D  +        IP           
Sbjct: 156 RNKKKSFFTVQYAHARCCSLLRLAHQEGLIQLTDNDAGVQCFLSAQAIPWLNSDQTLRFH 215

Query: 492 DTSELQLIVHL---------AEYPRVI--ENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
              E++LI  L         +++   +  E A               L+  F   W H R
Sbjct: 216 QLEEIRLIHQLVKMVDDLVVSDFSSSVNWEKAA------------LKLSQAFESFWCHCR 263

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI-IGVESP 582
               ++     + +L   RL L+ A   ++ + L   +GV +P
Sbjct: 264 IWGEVKI---KSLELAQARLGLLIATQLVLRAVLETKLGVFAP 303


>gi|118479624|ref|YP_896775.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044847|ref|ZP_03112081.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866439|ref|YP_002751817.1| valyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186699|ref|ZP_04313858.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118418849|gb|ABK87268.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024335|gb|EDX63008.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789413|gb|ACO29630.1| valine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596802|gb|EEK54463.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 881

 Score = 60.7 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I+  ++ +  ++D   F    +  E       +     L      IE+ T   + 
Sbjct: 575 NFINKIWNASRFVLMNMDDMKFEEIDLTGEKSVADKWI-----LTRLNETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|196034490|ref|ZP_03101899.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228948172|ref|ZP_04110456.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993032|gb|EDX56991.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228811530|gb|EEM57867.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDNMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|75759956|ref|ZP_00740025.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218899626|ref|YP_002448037.1| valyl-tRNA synthetase [Bacillus cereus G9842]
 gi|74492553|gb|EAO55700.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218541207|gb|ACK93601.1| valyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY G   P       Q  D+        L   ST+   D D    K      Y++
Sbjct: 425 KETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKR-----YYS 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D          G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 480 TDA------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 522

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 523 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 572

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 573 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 625

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 626 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 676

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 677 VLDQTMRLL 685


>gi|310827210|ref|YP_003959567.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
 gi|308738944|gb|ADO36604.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
          Length = 882

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   + +       +   +   G    I     N TG +H+GH     + D L   
Sbjct: 10  DPKDVESRIYAWWQEKDYFKPEVHQGGKSFTIVMPPPNITGQLHMGHAFDDTLQDVLTRF 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY              ++  +++   +  + + N +    E               
Sbjct: 70  KRMQGYAAL-------WVPGMDHASIATEVKVVEKIRNEEGKTKE--------------- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E++L    D+++      IR+ +K L    D          G    +
Sbjct: 108 ---------ELGREEFLKRAWDWALTY-KDRIREQVKKLGASCDWDRERFTMDEGCSEAV 157

Query: 274 RDIIDNLARQGYVYEG 289
           ++    L  +G +Y+G
Sbjct: 158 KETFVRLYEEGLIYKG 173



 Score = 38.4 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 28/207 (13%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               ++      +  L RD    KMSK  G+ I    ++++  +D++RF ++   NS   
Sbjct: 503 YNMGEVPFADVYIHGLIRDSQGRKMSKSLGNGIDPLEIIEQFSADALRFSIITG-NSAGN 561

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           D  +   K ++  N              I+  A+ +  +LD ++  +      +  +T +
Sbjct: 562 DIRWQDEKLEASRN----------FLNKIWNAARFVLMNLDENIMDQQDAALANLENTDK 611

Query: 496 LQLIVHLAEYPRVIENAT---IAQEPYKLAFYLYDLASVFHGH--WSHGRENPRLRFVQA 550
                 L+    V+ + T      E    A  +YD A  ++ +  W      PRL     
Sbjct: 612 W----ILSRMNDVVRDVTQNMDKYELGIAAQKVYDFA--WNEYCDWYIELVKPRLYGDDE 665

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNII 577
             +      L L      ++ + L ++
Sbjct: 666 TTKAAAQYTLNL------VLTNILKLL 686


>gi|228923211|ref|ZP_04086501.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836417|gb|EEM81768.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|229003043|ref|ZP_04160900.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758201|gb|EEM07389.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 627

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I   A  +    Q  + N
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKKAEELQVTSQAYVDN 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             + + E             E  D    + +   E++   +V+        KI +  +  
Sbjct: 77  IVAGIKEL-----------WEKMDISYDDFIRTTEDRHKEVVE--------KIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G    G   P      +    +     F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIME-GDKVVGGKSPDSGHAVELVREESY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF----- 349
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGN 231

Query: 350 -DNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+D+   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|196039248|ref|ZP_03106554.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029875|gb|EDX68476.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|326942237|gb|AEA18133.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|254757634|ref|ZP_05209661.1| valyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|228941625|ref|ZP_04104172.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974554|ref|ZP_04135120.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981149|ref|ZP_04141449.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778349|gb|EEM26616.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784957|gb|EEM32970.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228817837|gb|EEM63915.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|229152660|ref|ZP_04280848.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630806|gb|EEK87447.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 867

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|206975955|ref|ZP_03236865.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961947|ref|YP_002340517.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097904|ref|YP_002531961.1| valyl-tRNA synthetase [Bacillus cereus Q1]
 gi|206745707|gb|EDZ57104.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067118|gb|ACJ81368.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241962|gb|ACM14672.1| valyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|301770405|ref|XP_002920603.1| PREDICTED: LOW QUALITY PROTEIN: DALR anticodon-binding
           domain-containing protein 3-like [Ailuropoda
           melanoleuca]
          Length = 508

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 22/188 (11%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKD 470
            V + +   +++F ML       L          +K      +V Y  AR  ++F   + 
Sbjct: 325 EVFNVLSVATIKFEMLSTAPQNQLLLALADSSISTKGTKSGTFVMYNCARLATLFDGYEH 384

Query: 471 IFPDLDFDLFPR-NVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ--EP--YK---- 520
                 +  FP  + +      D  E  L+ + +  +P ++          P  +     
Sbjct: 385 SMEQGLYPTFPPVSSLDFSLLQDEGEWLLLFNGVLPFPDLLSQTAALACAAPGLHVTART 444

Query: 521 --LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLN 575
             +  +L  L+  F  +++      R+  +      L     +RLQL+ AV  ++++GL 
Sbjct: 445 EMMCKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLRAVREVLHAGLA 498

Query: 576 IIGVESPN 583
            +G+   N
Sbjct: 499 TLGLPPLN 506


>gi|30264526|ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529989|ref|YP_021338.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187350|ref|YP_030602.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321827|ref|ZP_00394786.1| COG0525: Valyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872012|ref|ZP_02216653.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640706|ref|ZP_02398966.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708361|ref|ZP_02898805.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653987|ref|ZP_02936028.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567025|ref|ZP_03019941.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218905660|ref|YP_002453494.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817238|ref|YP_002817247.1| valyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229093554|ref|ZP_04224656.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229600610|ref|YP_002868742.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724614|ref|ZP_05186397.1| valyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736562|ref|ZP_05194268.1| valyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754802|ref|ZP_05206837.1| valyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|81581271|sp|Q81LD3|SYV_BACAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30259184|gb|AAP28389.1| valine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505137|gb|AAT33813.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181277|gb|AAT56653.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712302|gb|EDR17838.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511278|gb|EDR86664.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126736|gb|EDS95619.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172081042|gb|EDT66120.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562016|gb|EDV15985.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218536093|gb|ACK88491.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227005238|gb|ACP14981.1| valine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228689884|gb|EEL43689.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229265018|gb|ACQ46655.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|284048773|ref|YP_003399112.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952994|gb|ADB47797.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 650

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 104/329 (31%), Gaps = 42/329 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  + DT+A     +G++V      ++ G +I   A S   +  +    
Sbjct: 15  PSADLHIGHAYCTTIADTIARYKRANGFDVQFITGSDEHGLKIQRKAESFGVKPIEYTDK 74

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS------VQA 240
             +D  +     G     +++    E      + L    E+  +   KDY        ++
Sbjct: 75  IVADFKKLWEMLGVSYTSFVRTSSPEHEKTVQTLLQKVWEQGDIYK-KDYEGLYCVPCES 133

Query: 241 MMKIIRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                + + +A  +  D       + E  +          I++ +       + +    +
Sbjct: 134 FWTEHQVE-EAGGVCPDCGRPVEKMRESSYFFRMSKYADRILEYIETHPDFIQPVSRRNE 192

Query: 296 SKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                K  ++   +   S   G     D      +  D    YF          + R  D
Sbjct: 193 MINFIKQGLEDLCISRSSFDWGIQVPFDPKHVVYVWFDALLAYFTG------IGFGRDMD 246

Query: 351 NMIYVMGSDHSG--------YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                  +D           +     A+  A+     +       LV         KMSK
Sbjct: 247 KFNRFWPADLHLVGKEIVRFHTIIWPAMLMAMGFDLPKEVYGHGWLVVDG-----DKMSK 301

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             G+ +     + E G+D+VR+ +L   N
Sbjct: 302 SKGNVVDPVQPIQEFGADAVRYFLLREIN 330


>gi|167636213|ref|ZP_02394517.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688689|ref|ZP_02879894.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254687052|ref|ZP_05150910.1| valyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741600|ref|ZP_05199287.1| valyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528434|gb|EDR91202.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667375|gb|EDT18133.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 37.6 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 62/177 (35%), Gaps = 29/177 (16%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSFGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
                I       F  ++ D      I    E   ++  ++  L      IE+ T  
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRN 626


>gi|154686944|ref|YP_001422105.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154352795|gb|ABS74874.1| ValS [Bacillus amyloliquefaciens FZB42]
          Length = 880

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + K      + G  +           ++     N TG +H+GH     + D +  +
Sbjct: 13  DPSAIEKGRYDFWLKGKYFEAGGDQTKQPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRM 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G     +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLRE----------QGTSRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W         +     IR     + +  D          G    +
Sbjct: 115 ---------KFLEETWK------WKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLNKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R++   L ++G +Y G         T+    D
Sbjct: 160 REVFVKLYKKGLIYRGEYIINWDPATKTALSD 191



 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 88/245 (35%), Gaps = 45/245 (18%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R +   + V G D   +      +   +    ++   +VL+  L+   RD    KMSK
Sbjct: 473 FKRYYSTDVLVTGYD-IIFFWVSRMIFQGLEFTGERPFKDVLIHGLI---RDEQGRKMSK 528

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +    V+D+ G+DS+R+ +                   +  +P   ++++Y +  
Sbjct: 529 SLGNGVDPMDVIDKYGADSLRYFL------------------ATGSSPGQDLRFSYEKVE 570

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENA---TIAQE 517
           S +  A  I+    F L   + +  +    + E  +     L      IE+        E
Sbjct: 571 STWNFANKIWNASRFALMNMDGMTYDELDLSGEKSVADKWILTRLNETIEDVTQLADRYE 630

Query: 518 PYKLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             ++  +LY     D+       +    E  +L     +       R  L +    +++ 
Sbjct: 631 FGEVGRHLYNFIWDDVCD----WY---IEMAKLPLYGEDEAAKKTTRSVLAY----VLDQ 679

Query: 573 GLNII 577
            + ++
Sbjct: 680 TMRLL 684


>gi|301055965|ref|YP_003794176.1| valyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378134|gb|ADK07038.1| valyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D         +G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|303232293|ref|ZP_07318991.1| glutamate--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481616|gb|EFL44678.1| glutamate--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 577

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 61/313 (19%), Positives = 114/313 (36%), Gaps = 43/313 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYIND 169
              +   + + F + +PTG +H+G  R A+     A       ++     +  R    N 
Sbjct: 41  QPHETRPIRVRF-APSPTGKLHIGGARTAIYNWAFARANHGTFILRIDDTDPLRSTEEN- 98

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              QI   A+S        L  ++  +  G   G Y +    +L    + +LL+  +  +
Sbjct: 99  --TQIILRAMSWL-----GLDWDEGPMK-GGAFGPYAQTERHDLYVAAAQKLLDENKAYY 150

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                 +    M++  + +  A   +   +       R      RD  +    QG  Y  
Sbjct: 151 C-----FCTPEMLEADKQEQIAAKARFQGYT------RRCRGLSRDEAEKRIAQGEPYTI 199

Query: 290 ILPPPKSKTTQKC-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +  P ++      D+    ++F +  + D +   L++SDG+ TY   + A         
Sbjct: 200 RIKVPLNRGDVHVHDLIHGDVVFSARELDDFI---LIRSDGTPTY---NFATVVDDAAMQ 253

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++I   G DH     R   V  A+    AQ+ +     + L  DG   K+SKR G   
Sbjct: 254 ITHIIR--GDDHLSNTPRQVIVYEALG---AQVPMFAHLSMILGTDGK--KLSKRHG-AT 305

Query: 409 TLRHVVDEVGSDS 421
           ++    D  G D+
Sbjct: 306 SVEEYRDA-GYDA 317


>gi|228902987|ref|ZP_04067127.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967560|ref|ZP_04128586.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792139|gb|EEM39715.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856663|gb|EEN01183.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 867

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY G   P       Q  D+        L   ST+   D D    K      Y++
Sbjct: 411 KETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKR-----YYS 465

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D          G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 466 TDA------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 508

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 509 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 558

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 559 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 611

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 612 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 662

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 663 VLDQTMRLL 671


>gi|228960734|ref|ZP_04122373.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229129750|ref|ZP_04258717.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147028|ref|ZP_04275388.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180734|ref|ZP_04308072.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602712|gb|EEK60195.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636416|gb|EEK92886.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653666|gb|EEL09537.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798950|gb|EEM45925.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 867

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|228954741|ref|ZP_04116763.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229192669|ref|ZP_04319628.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590759|gb|EEK48619.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228804939|gb|EEM51536.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 867

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|52141048|ref|YP_085781.1| valyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824177|sp|Q633Y6|SYV_BACCZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51974517|gb|AAU16067.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 881

 Score = 60.3 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|229083353|ref|ZP_04215709.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699960|gb|EEL52589.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 660

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 117/349 (33%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D   + + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKEVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G    G   P      +    +     F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIME-GDKVVGGKSPDSGHAVELVREESY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+D+   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|47566648|ref|ZP_00237470.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|229158076|ref|ZP_04286146.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|47556678|gb|EAL15010.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228625395|gb|EEK82152.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 881

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|229019683|ref|ZP_04176490.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229175140|ref|ZP_04302656.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608276|gb|EEK65582.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228741590|gb|EEL91783.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 881

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY G   P       Q  D+        L   ST+   D D    K      Y++
Sbjct: 425 KETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKR-----YYS 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D          G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 480 TDA------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 522

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 523 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 572

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 573 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 625

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 626 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 676

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 677 VLDQTMRLL 685


>gi|42783595|ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409029|sp|Q72ZW8|SYV_BACC1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42739524|gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 881

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|228910293|ref|ZP_04074110.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849353|gb|EEM94190.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY G   P       Q  D+        L   ST+   D D    K      Y++
Sbjct: 411 KETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKR-----YYS 465

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D          G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 466 TDA------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 508

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 509 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 558

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 559 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 611

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 612 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 662

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 663 VLDQTMRLL 671


>gi|229141196|ref|ZP_04269735.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228642237|gb|EEK98529.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|320529725|ref|ZP_08030804.1| glutamyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138086|gb|EFW29989.1| glutamyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 492

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 95/297 (31%), Gaps = 44/297 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+     A       ++     +  R  Y+ DA   I     +  
Sbjct: 10  APSPTGYMHIGNLRTALYAYLFARANDGTFILRIE--DTDRSRYVADAVDFIRRTLDAA- 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++     G   G Y++    E+  KY+ +L+            +++ +   
Sbjct: 67  -----GIVPDEGPDDIGGDYGPYVQSERTEIYKKYAEQLVETG--HAYRCFCNHAEEQPA 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                             SE+             I+    +G  Y      P +  T   
Sbjct: 120 AEGEKTFGGYPRTCRDLPSEE-------------IEARLARGEEYVIRQKMPLTGETTFY 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+    +   +T +    D+ LLKSDG  TY   + A           ++I       + 
Sbjct: 167 DVLHGNVTIPNTEL---EDQVLLKSDGMPTY---NFANVIDDRLMKVSHII-----RGTE 215

Query: 363 YVKRLEAVA---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           ++           A   +      L   + R    G   K+SKR G   +   +V+ 
Sbjct: 216 FITSTPKHVLLYEAFGWEPPVFVHLAPVMGRDEETGKTSKLSKRHG-ATSFNDLVEA 271


>gi|228929504|ref|ZP_04092524.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830184|gb|EEM75801.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGHK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|294791949|ref|ZP_06757097.1| glutamate--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457179|gb|EFG25541.1| glutamate--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 489

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 97/285 (34%), Gaps = 44/285 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 9   APSPTGPFHIGGARSALFNWLLAR--KEKGTFVLRIE-DTDLARSTRESEENIKASLQWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D  +  G   G Y +    +L  + +  LL+          + Y     +  +R D
Sbjct: 66  GMNWDEGIDVGGNNGPYRQTERLDLYKEVTQRLLDEG-----KAYECYCTPEELDAVRQD 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQGYVYEGI-----LPPPKSKTTQ 300
                             RG+        + +D   +  Y+ EG      L  P +KT  
Sbjct: 121 ---------------QMDRGETPKYNGHCEHLDEETKAKYIAEGRKPTIRLRVPLNKTYA 165

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R  + F S  VGD     ++KSDG   Y   + A     +  G  ++I     +H
Sbjct: 166 FDDMVRGHVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMGITHVIR--AEEH 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A+  K  +        + L       KMSKR G
Sbjct: 218 LSNTPRQMAIYEALGWKVPKFGH-----ISLILGKDYKKMSKRHG 257


>gi|228917096|ref|ZP_04080654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935777|ref|ZP_04098589.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823834|gb|EEM69654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842514|gb|EEM87604.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|229081723|ref|ZP_04214216.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701568|gb|EEL54061.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D         +G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|228987710|ref|ZP_04147821.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771984|gb|EEM20439.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|229025922|ref|ZP_04182314.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735368|gb|EEL85971.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 867

 Score = 60.3 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY G   P       Q  D+        L   ST+   D D    K      Y++
Sbjct: 411 KETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKR-----YYS 465

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D          G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 466 TDA------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 508

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 509 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 558

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 559 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 611

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 612 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 662

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 663 VLDQTMRLL 671


>gi|229105097|ref|ZP_04235748.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678278|gb|EEL32504.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 867

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|229198587|ref|ZP_04325289.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584869|gb|EEK42985.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 867

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|229032112|ref|ZP_04188090.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729202|gb|EEL80200.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 867

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 100/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G VY G   P   +     D D     F S +              +  +   D A 
Sbjct: 411 KETGEVYVGTEEPADIEN-WNQDNDVLDTWFSSALWPFS----------TLGWPNEDAAD 459

Query: 341 FKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           FK  Y       G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 460 FKRYYSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 508

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 509 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 558

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 559 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 611

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 612 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 662

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 663 VLDQTMRLL 671


>gi|229098932|ref|ZP_04229867.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229117961|ref|ZP_04247321.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665410|gb|EEL20892.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684430|gb|EEL38373.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 867

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|229163414|ref|ZP_04291365.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619983|gb|EEK76858.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 867

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G VY G   P       Q  D+        L   ST+   D D    K      Y++
Sbjct: 411 KETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKR-----YYS 465

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D          G+D +I+   S        +        E+  + +VL+  LV   RD 
Sbjct: 466 TDA------LVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDE 508

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    V+++ G+D++R+ +       + L F   KV+           
Sbjct: 509 QGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES---------- 558

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              +     I       F  ++ D      I    E   ++  ++  L      IE+ T 
Sbjct: 559 --TWNFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTR 611

Query: 515 AQEPYKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
             +      Y +  A   +++  W        E  +L     +       R  L +    
Sbjct: 612 NMD-----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY---- 662

Query: 569 IINSGLNII 577
           +++  + ++
Sbjct: 663 VLDQTMRLL 671


>gi|229829588|ref|ZP_04455657.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM
           14600]
 gi|229791577|gb|EEP27691.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM
           14600]
          Length = 888

 Score = 60.3 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 56/198 (28%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L     +   +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKGIEVRLYEKWENKGYFHAQVNRDKKPFTIVMPPPNITGKLHMGHALDNTMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE             ++  A++   +   AL     D                
Sbjct: 68  RYKRMQGYEAL-------WQPGMDHAAIATEVKVTNALKGKGIDK--------------- 105

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                     L    EK+L    D+  +    II   LK L    D         RG   
Sbjct: 106 ----------LAIGREKFLEYCWDWREEYGRAIINQ-LKKLGSSADWERERFTMDRGCSE 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y G
Sbjct: 155 AVEEVFCRLYEKGYIYRG 172


>gi|255536272|ref|YP_003096643.1| Glutamyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342468|gb|ACU08581.1| Glutamyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 503

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 92/278 (33%), Gaps = 20/278 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G +        D    +      +    +  
Sbjct: 9   APSPTGPLHLGGVRTALYDYLFA---KRQGGDFVVRIEDTDTARYVEGAEEYIMEALEWC 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y +   +++ D+Y  ++L             +     +  IR  
Sbjct: 66  GMIPDESPKHGGRYGPYRQSERRDIYDRYLEQMLKTD-----YAYLAFDTTEELDEIRKS 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +             +  +   +   + +  L      Y      P  +     D+ R +
Sbjct: 121 YEEKGDVFAYNYITRNHLKNSLTLSAEEVQQLISDEVPYVVRFKMPVDRILNLEDIIRGK 180

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
               +  +    D+ L+K DG  TY  A++      +E    ++I   G +    +    
Sbjct: 181 FAVNTNTLD---DKVLVKQDGMPTYHFANI---IDDHEMEISHVIR--GEEWLPSLGLHY 232

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +  A+  +K Q   L    + L  +G   K+SKR GD
Sbjct: 233 LLYEAMGWEKPQFAHLS---LILKPEGKG-KLSKRDGD 266


>gi|229074100|ref|ZP_04207147.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708994|gb|EEL61120.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 660

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|297528459|ref|YP_003669734.1| glutamyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251711|gb|ADI25157.1| glutamyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 491

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 100/292 (34%), Gaps = 28/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D    +     S     +  
Sbjct: 11  APSPTGHLHIGGARTALFNYLFAR---HHGGKMIVRIEDTDIERNVEGGEKSQLENLKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  + +    G Y +    ++  KY +ELL           K +     ++  R+ 
Sbjct: 68  GIDYDESIDQDGGYGPYRQTERLDIYRKYVNELLEQG-----HAYKCFCTPEELEREREA 122

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A  I    +  +            + +  L  QG  Y   L  P+ KT +  D+ R +
Sbjct: 123 QRAAGIAAPQYSGKC------RHLTPEQVAELEAQGKPYTIRLKVPEGKTYEFYDLVRGK 176

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++F S  VG   D  ++K++G  TY FA  +     +    F       G +H     + 
Sbjct: 177 VVFESKDVG--GDWVIVKANGIPTYNFAVVIDDHLMEISHVFR------GEEHLSNTPKQ 228

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V         Q        + L  +    K+SKR    I       E+G 
Sbjct: 229 LMVYEYFGWDPPQFAH-----LTLIVNEQRKKLSKRDESIIQFVSQYKELGY 275


>gi|299143743|ref|ZP_07036823.1| glutamate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518228|gb|EFI41967.1| glutamate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 496

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 107/288 (37%), Gaps = 39/288 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R  +++ A   I  L  ++ 
Sbjct: 9   APSPTGFLHIGGLRTALYNYLYARKNNGKFILRIE--DTDRTRFVDGA---IENLVNALK 63

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           W    Y + ++  + ++ E    G Y++    ++  KY  EL+      +        + 
Sbjct: 64  WAGIDYDEGVFFENGEVVEKGEYGPYIQSKRLDIYKKYVDELIEKDM-AYYCFCTKERLD 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +  R                D F RG    + +    +A  G  Y   L  P++   
Sbjct: 123 HVREEQR--------IKGQVPKYDGFCRG--GSLDEAKKRIA-NGEDYVVRLKLPRNTNI 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  R ++   +  +    D+ L+KSDG  TY    +A     +  G  ++  V G +
Sbjct: 172 TFEDAVRGKVTINTDEID---DQVLMKSDGFPTYH---MAVVVDDHLMGITHV--VRGEE 223

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                 +   +  A+  K  Q  V L  ++   R     K+SKR GD 
Sbjct: 224 WLPSTPKHVFLYEALGWKAPQF-VHLPTVLNKDR----KKLSKRQGDV 266


>gi|229917381|ref|YP_002886027.1| glutamyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468810|gb|ACQ70582.1| glutamyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 484

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 111/312 (35%), Gaps = 44/312 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A     +G ++     I D   + N L  +    +Y +
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR---HAGGKMILR--IEDTDQKRNVLNGVESQMKYLE 63

Query: 188 ALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKII 245
            L  +  + P      G Y +     + +KY +EL++     K     ++   +   +I 
Sbjct: 64  WLGIDWDEGPGRDGDYGPYYQMERLAIYEKYVNELMSKGLAYKCYMTSEELEAEREAQIA 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +    +  H     E+          R+  +   R+  +    +  P+  T +  D+ 
Sbjct: 124 RGEAPRYSGAHRNLTVEE----------REAFEAEGRKPSIR---IRVPEGVTYKWTDVV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           +  + F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 171 KGDVSFESKDFGDW---VIVKQDGIPTY---NFAVVVDDHLMKISHVLR--GDDHIANTP 222

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           +   V  A+     +   +      L  +    K+SKR    I              ++ 
Sbjct: 223 KQMMVYDALGWDYPEFGHM-----TLIYNDQHKKLSKRDESIIQFIE----------QYA 267

Query: 426 MLWRKNSELLDF 437
            L    + L +F
Sbjct: 268 DLGYLPAALFNF 279


>gi|104774475|ref|YP_619455.1| glutamyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|122983904|sp|Q1G8Y5|SYE_LACDA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|103423556|emb|CAI98474.1| Glutamyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 500

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 35/307 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      A 
Sbjct: 1   MANKKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTAR-NVEGGAE 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D     G   G Y +   K++  KY  +LL   E K   
Sbjct: 59  SQIENL----HWLGIDWDEGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYY 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K        +  +   +A+ I         ++       I+   D    +G      +
Sbjct: 109 SFKTEEELEAQREEQ---RAMGIAPHYVY---EYEGMTTDEIKQAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+  T +  D+ +  L F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPEGVTYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTY---NFAVVIDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A+  +      +   +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHISNTPKQLCVYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVG 418
               E+G
Sbjct: 272 EQYRELG 278


>gi|325126293|gb|ADY85623.1| Glutamyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 500

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 35/307 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      A 
Sbjct: 1   MANKKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGSLVLRIEDTDTAR-NVEGGAE 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D     G   G Y +   K++  KY  +LL   E K   
Sbjct: 59  SQIENL----HWLGIDWDEGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYY 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K        +  +   +A+ I         ++       I+   D    +G      +
Sbjct: 109 SFKTEEELEAQREEQ---RAMGIAPHYVY---EYEGMTTDEIKQAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+  T +  D+ +  L F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPEGVTYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTY---NFAVVIDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A+  +      +   +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHISNTPKQLCVYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVG 418
               E+G
Sbjct: 272 EQYRELG 278


>gi|229559996|sp|Q048S3|SYE_LACDB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 500

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 35/307 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      A 
Sbjct: 1   MANKKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTAR-NVEGGAE 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D     G   G Y +   K++  KY  +LL   E K   
Sbjct: 59  SQIENL----HWLGIDWDEGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYY 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K        +  +   +A+ I         ++       I+   D    +G      +
Sbjct: 109 SFKTEEELEAQREEQ---RAMGIAPHYVY---EYEGMTTDEIKQAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+  T +  D+ +  L F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPEGVTYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTY---NFAVVIDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A+  +      +   +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHISNTPKQLCVYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVG 418
               E+G
Sbjct: 272 EQYRELG 278


>gi|282850305|ref|ZP_06259684.1| glutamate--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579798|gb|EFB85202.1| glutamate--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 491

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 97/285 (34%), Gaps = 44/285 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 9   APSPTGPFHIGGARSALFNWLLAR--KEKGTFVLRIE-DTDLARSTRESEENIKASLQWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D  +  G   G Y +    +L  + +  LL+          + Y     +  +R D
Sbjct: 66  GMNWDEGIDVGGNNGPYRQTERLDLYKEVTQRLLDEG-----KAYECYCTPEELDAVRQD 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQGYVYEGI-----LPPPKSKTTQ 300
                             RG+        + +D   +  Y+ EG      L  P +KT  
Sbjct: 121 ---------------QMDRGETPKYNGHCEHLDEETKAKYIAEGRKPTIRLRVPLNKTYA 165

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R  + F S  VGD     ++KSDG   Y   + A     +  G  ++I     +H
Sbjct: 166 FDDMVRGHVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMGITHVIR--AEEH 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A+  +  +        + L       KMSKR G
Sbjct: 218 LSNTPRQMAIYEALGWEVPKFGH-----ISLILGKDYKKMSKRHG 257


>gi|229094760|ref|ZP_04225766.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229100827|ref|ZP_04231642.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229113713|ref|ZP_04243149.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669710|gb|EEL25116.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228682594|gb|EEL36656.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228688628|gb|EEL42500.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 660

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|167630790|ref|YP_001681289.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167593530|gb|ABZ85278.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 894

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 83/269 (30%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +     +       +  ++   G   ++     N TG +H+GH     + D L+
Sbjct: 12  TYDPKQVESKWYAWWSEKGYFTADVQSGGKAFSVVMPPPNVTGSLHLGHAMDNTLQDILS 71

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY V      + AG       ++   + ++AL                      
Sbjct: 72  RFKRMQGYHVLWVPGTDHAG-------IATQAKVEEAL---------------------- 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   E +L  V D+  Q   + I   L+ L    D          G   
Sbjct: 103 ---AKEGLSKYDLGREAFLERVWDWKHQYGTR-ITTQLRTLGTSCDWTRERFTMDEGCSE 158

Query: 272 PIRDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPL 324
            ++++   L  +G +Y G   I   PK +TT    +    +R   L+       D D  +
Sbjct: 159 AVQEVFIRLYEKGLIYRGNRIINWCPKCQTTISDIEVEHEERGGHLWHIRYPVQDGDGEV 218

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +         D A      +  + ++I
Sbjct: 219 VVATTRPETMLGDTAVAVHPDDDRYKHLI 247


>gi|294793813|ref|ZP_06758950.1| glutamate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455383|gb|EFG23755.1| glutamate--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 489

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 97/285 (34%), Gaps = 44/285 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 9   APSPTGPFHIGGARSALFNWLLAR--KEKGTFVLRIE-DTDLARSTRESEENIKASLQWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D  +  G   G Y +    +L  + +  LL+          + Y     +  +R D
Sbjct: 66  GMNWDEGIDVGGNNGPYRQTERLDLYKEVTQRLLDEG-----KAYECYCTPEELDAVRQD 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQGYVYEGI-----LPPPKSKTTQ 300
                             RG+        + +D   +  Y+ EG      L  P +KT  
Sbjct: 121 ---------------QMDRGETPKYNGHCEHLDEETKAKYIAEGRKPTIRLRVPLNKTYA 165

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R  + F S  VGD     ++KSDG   Y   + A     +  G  ++I     +H
Sbjct: 166 FDDMVRGHVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMGITHVIR--AEEH 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A+  +  +        + L       KMSKR G
Sbjct: 218 LSNTPRQMAIYEALGWEVPKFGH-----ISLILGKDYKKMSKRHG 257


>gi|152976875|ref|YP_001376392.1| valyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025627|gb|ABS23397.1| valyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 881

 Score = 59.9 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 55/212 (25%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHKSVEDGRYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G         T+    D
Sbjct: 160 KKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+D+ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEDIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSVLAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|315645746|ref|ZP_07898870.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279224|gb|EFU42534.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 889

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 69/269 (25%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +        G  +            I     N TG +H+GH     + D L 
Sbjct: 15  TYDPKAAEQKWYPYWKEGGFFEAGKRPDAEPYTIVIPPPNVTGMLHIGHALDFTLQDILI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    GY+                                   LP   + G+  +   +
Sbjct: 75  RVKRMQGYDAL--------------------------------WLPGSDHAGIATQTKVE 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++        IRD    + +  D          G   
Sbjct: 103 QKLREEGVTRYDLGREKFLEKVWEWK-DLYANTIRDQWSKIGLSLDYSRERFTLDEGLSE 161

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L  +G +Y G          +    D +            +  PL    G  
Sbjct: 162 AVREVFVKLYDKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGHLYHLQYPLKDGSGFI 221

Query: 332 TYFAA-------DLAYFKCKYERGFDNMI 353
           T           D A      +  + +MI
Sbjct: 222 TVATTRPETMLGDTAVAVHPEDERYKDMI 250


>gi|269798078|ref|YP_003311978.1| glutamyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094707|gb|ACZ24698.1| glutamyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 489

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 61/291 (20%), Positives = 99/291 (34%), Gaps = 56/291 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP H+G  R A+    LA       ++     ++TR                ++ 
Sbjct: 9   APSPTGPFHIGGARSALFNWLLARKEKGTFVLRIEDTDLTRST---------RESEENIK 59

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              Q    N D  +  G   G Y +    +L  + +  LL+          + Y     +
Sbjct: 60  ASLQWLGMNWDEGIDVGGNNGPYRQTERLDLYKEVTQRLLDEG-----KAYECYCTPEEL 114

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQGYVYEG-----ILPPP 294
             +R D                  RG+        + +D   +  Y+ EG      L  P
Sbjct: 115 DAVRQD---------------QMERGETPKYNGHCEHLDEETKAKYIAEGRKPTIRLRVP 159

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
            +KT    DM R  + F S  VGD     ++KSDG   Y   + A     +  G  ++I 
Sbjct: 160 LNKTYAFDDMVRGHVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMGITHVIR 213

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               +H     R  A+  A+  +  +        + L       KMSKR G
Sbjct: 214 --AEEHLSNTPRQMAIYEALGWEVPKFGH-----ISLILGKDYKKMSKRHG 257


>gi|325571587|ref|ZP_08147087.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156063|gb|EGC68259.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 943

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 74  NPQEVEAGRYQDWLEHDRFKPSGNKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 133

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + ++ L             G+    +G+E 
Sbjct: 134 KRMQGYDTL-------WLPGMDHAGIATQAKVEEKLRE----------QGISRYDLGRE- 175

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ EE                 IR+    L +  D          G    +
Sbjct: 176 --KFVEQVWDWKEE-------------YAGHIREQWAKLGLSLDYSRERFTLDDGLSEAV 220

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 221 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 252


>gi|300812971|ref|ZP_07093359.1| glutamate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496064|gb|EFK31198.1| glutamate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 500

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 35/307 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      A 
Sbjct: 1   MANKKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTAR-NVEGGAE 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D     G   G Y +   K++  KY  +LL   E K   
Sbjct: 59  SQIENL----HWLGIDWDEGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYY 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K        +  +   +A+ I         ++       I+   D    +G      +
Sbjct: 109 SFKTEEELEAQREEQ---RAMGIAPHYVY---EYEGMTTDEIKQAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+  T +  D+ +  L F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPEGVTYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A+  +      +   +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHISNTPKQLCVYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVG 418
               E+G
Sbjct: 272 EQYRELG 278


>gi|313124326|ref|YP_004034585.1| glutamyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280889|gb|ADQ61608.1| Glutamyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 500

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 35/307 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      A 
Sbjct: 1   MANKKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTAR-NVEGGAE 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D     G   G Y +   K++  KY  +LL   E K   
Sbjct: 59  SQIENL----HWLGIDWDEGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYY 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K        +  +   +A+ I         ++       I+   D    +G      +
Sbjct: 109 SFKTEEELEAQREEQ---RAMGIAPHYVY---EYEGMTTDEIKQAQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+  T +  D+ +  L F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPEGVTYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A+  +      +   +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHISNTPKQLCVYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVG 418
               E+G
Sbjct: 272 EQYRELG 278


>gi|311028969|ref|ZP_07707059.1| methionyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 663

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 117/349 (33%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I         R  +    
Sbjct: 17  PSGNLHIGHAYTTVAGDAMARYKRLKGFDVMYLTGTDEHGQKI--------QRKAEEKGV 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +    G  +K +  E  D    + +   E +   +V+        KI +  L  
Sbjct: 69  TSQQYVDDIVSG--IKDL-WEKLDISYDDFIRTTESRHKEVVE--------KIFKQLLDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G V    +      +    ++ R+Q  F
Sbjct: 118 GDIYLDEYEGWYSVPDETYYREHQLVDPIHENGKV----VGGKSPDSGHPVELVREQSYF 173

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
               +G  VDR L   D +  +                    DLA  +  ++ G      
Sbjct: 174 --FRMGKYVDRLLQYYDENPEFIQPESRKNEMVNNFIKPGLEDLAVSRTSFDWGVKVPGD 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+D+   Y+K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWIDALSNYITALGYGTDNDEKYMKYWPADVHLVGKEIVRFHTIYWPIMLMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|325679112|ref|ZP_08158706.1| methionine--tRNA ligase [Ruminococcus albus 8]
 gi|324109236|gb|EGC03458.1| methionine--tRNA ligase [Ruminococcus albus 8]
          Length = 659

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 106/340 (31%), Gaps = 63/340 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GHC   V  D++A      GY+V                 + +    +     
Sbjct: 13  PSGDPHIGHCYTTVACDSIARYKRMQGYDV-----------------MFLTGTDEHGQKI 55

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D    +G  P  Y+  V       +S   +N   ++++    DY V+++ KI ++    
Sbjct: 56  EDKARDKGVTPQQYVDEVVATFKKLWS--YMNISYDRYIRTTDDYHVESVQKIFKELYDK 113

Query: 252 LNIQHDIF--------------------------------ISEDDFHRGDPSPIRDIIDN 279
             I    +                                 SE+ +          I   
Sbjct: 114 GYIYKGEYTGKYCTPCESFWTESQLDADGCCPECHRPVKEASEEAYFFKMSPFADRIEKL 173

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYF 334
           L    Y+              K  ++   +   S   G     D      +  D    Y 
Sbjct: 174 LTETDYLRPKTRATELVNNFIKPGLEDLCVSRTSFTWGIPVTFDPKHVVYVWVDALSNYC 233

Query: 335 AADLAYFKCKYERGFDNM----IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
            A L Y   KY   +D      ++++  D    +     A+  A+ E   +   +   + 
Sbjct: 234 TA-LGYKNNKYN-DYDKYWPADVHMVAKDIMRFHAIIWPAILMALDEPLPKHLAVHGWIT 291

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              ++G   KMSK  G+ +    + +  G D++R+ +L  
Sbjct: 292 FQNKNGEAQKMSKSLGNVVDPFMLGERYGVDAIRYHILRE 331


>gi|229027885|ref|ZP_04184040.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228733399|gb|EEL84226.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 660

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|156383393|ref|XP_001632818.1| predicted protein [Nematostella vectensis]
 gi|156219880|gb|EDO40755.1| predicted protein [Nematostella vectensis]
          Length = 171

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 11  LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL-----GLDPLTIA 65
           + N L +   ++         I+++  ++   G    N+AM LS+ L       +P  IA
Sbjct: 90  ILNELFKQAIRVAFPAVTDPPILVQSTQNDKFGDYQCNSAMGLSQILKNNGQKANPQAIA 149

Query: 66  ELIVARIKIDPDVDSV 81
           + I+A +  +  ++ V
Sbjct: 150 KSIIASLPPNDLIEKV 165


>gi|311268881|ref|XP_003132247.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           [Sus scrofa]
          Length = 592

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 22/177 (12%)

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++F ML       L          +K      +V Y  AR  ++F   +       +  F
Sbjct: 419 IKFEMLSTAPQNQLLLALADNSISTKGTKSGTFVMYNCARLATLFEGYRCSVEKGLYPTF 478

Query: 481 PR-NVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQ--EP--YK------LAFYLYDL 528
           P  + +      D  E  L+   +  +P ++ +  +     P  +       +  +L  L
Sbjct: 479 PPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSHTGMLACTAPGLHITARTEMVCKFLVQL 538

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLNIIGVESP 582
           +  F  +++      R+  +      L      RLQL+ AV+ ++++GL ++G+   
Sbjct: 539 SMDFSSYYN------RVHILGEPRPHLFGQMFARLQLLQAVSDVLHTGLAMLGLPPL 589


>gi|56418618|ref|YP_145936.1| glutamyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|67461632|sp|Q5L431|SYE_GEOKA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|56378460|dbj|BAD74368.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 490

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 101/292 (34%), Gaps = 28/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D    +     S     +  
Sbjct: 10  APSPTGHLHIGGARTALFNYLFAR---HHGGKMIVRIEDTDIERNVEGGEKSQLENLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  + +    G Y +    ++  KY +ELL           K +     ++  R+ 
Sbjct: 67  GIDYDESIDQDGGYGPYRQTERLDIYRKYVNELLEQG-----HAYKCFCTPEELEREREA 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A  I    +  +            + +  L  QG  Y   L  P+ KT +  D+ R +
Sbjct: 122 QRAAGIAAPQYSGKC------RHLTPEQVAELEAQGKPYTIRLKVPEGKTYEFYDLVRGK 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++F S  VG   D  ++K++G  TY FA  +     +    F       G +H     + 
Sbjct: 176 VVFESKDVG--GDWVIVKANGIPTYNFAVVIDDHLMEISHVFR------GEEHLSNTPKQ 227

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V      +  Q        + L  +    K+SKR    I       E+G 
Sbjct: 228 LMVYEYFGWEPPQFAH-----LTLIVNEQRKKLSKRDESIIQFVSQYKELGY 274


>gi|261417584|ref|YP_003251266.1| glutamyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765242|ref|YP_004130743.1| glutamyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374041|gb|ACX76784.1| glutamyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110108|gb|ADU92600.1| glutamyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 491

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 101/292 (34%), Gaps = 28/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D    +     S     +  
Sbjct: 11  APSPTGHLHIGGARTALFNYLFAR---HHGGKMIVRIEDTDIERNVEGGEKSQLENLKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  + +    G Y +    ++  KY +ELL           K +     ++  R+ 
Sbjct: 68  GIDYDESIDQDGGYGPYRQTERLDIYRKYVNELLEQG-----HAYKCFCTPEELEREREA 122

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A  I    +  +            + +  L  QG  Y   L  P+ KT +  D+ R +
Sbjct: 123 QRAAGIAAPQYSGKC------RHLTPEQVAELEAQGKPYTIRLKVPEGKTYEFYDLVRGK 176

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++F S  VG   D  ++K++G  TY FA  +     +    F       G +H     + 
Sbjct: 177 VVFESKDVG--GDWVIVKANGIPTYNFAVVIDDHLMEISHVFR------GEEHLSNTPKQ 228

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V      +  Q        + L  +    K+SKR    I       E+G 
Sbjct: 229 LMVYEYFGWEPPQFAH-----LTLIVNEQRKKLSKRDESIIQFVSQYKELGY 275


>gi|296225162|ref|XP_002807626.1| PREDICTED: LOW QUALITY PROTEIN: DALR anticodon-binding
           domain-containing protein 3-like [Callithrix jacchus]
          Length = 544

 Score = 59.5 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 22/177 (12%)

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           ++F ML       +          +K      +V Y  AR  ++F   K       +  F
Sbjct: 371 IKFEMLGTAPQSQILLVLADSNISTKGTKSGTFVMYNCARLATLFESYKCSMEQGLYPTF 430

Query: 481 PR-NVIPQESEFDTSELQLIV-HLAEYPRVI-ENATIAQ-EP--YK------LAFYLYDL 528
           P  + +      D  E  L+   +  +  ++ + A +    P  +       +  +L  L
Sbjct: 431 PPVSSLDFSLLHDEGEWLLLFNSILPFTDLLSQTAVLDYTAPGLHIAARTEMMCKFLVQL 490

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLNIIGVESP 582
           +  F  +++      R+  +      L     +RLQL+ AV  ++++GL ++G+   
Sbjct: 491 SMDFSSYYN------RVHILGEPRPHLFGQMFVRLQLLKAVREVLHTGLAMLGLPPL 541


>gi|156333833|ref|XP_001619424.1| hypothetical protein NEMVEDRAFT_v1g151419 [Nematostella vectensis]
 gi|156202595|gb|EDO27324.1| predicted protein [Nematostella vectensis]
          Length = 107

 Score = 59.5 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 24/118 (20%)

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGS 358
           +    D ++++F   + G  V   ++KSDG YTY  +DLA  + + E    D +IYV  +
Sbjct: 8   KVLVEDGRKVVF---VEGYKVPLTVVKSDGGYTYDTSDLAALRQRVEDERGDWIIYVTDA 64

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                 +R                    ++  L       K   R+G+ + L  ++DE
Sbjct: 65  GQ----QRKHK----------------NDMFDLAVYFNRKKFKTRSGETVRLVDLMDE 102


>gi|268316289|ref|YP_003290008.1| valyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333823|gb|ACY47620.1| valyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 895

 Score = 59.5 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 100/339 (29%), Gaps = 64/339 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +     +   +   +   +    T   I     N TG +H+GH     + D L  +
Sbjct: 17  DPQEIEPRWYAYWEANNFFRAEIRPDRTPFVIMMPPPNVTGRLHMGHALQDTIQDALTRI 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE      I+ AG     +                               V +EL
Sbjct: 77  RRMQGYEALWLPGIDHAGIATQNV-------------------------------VEREL 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K      +   E +L  V  +  +    II    + L    D   +      G    +
Sbjct: 106 REKEGKTRHDLGREAFLQRVWQWK-EEYGDIILQQKRRLGDSCDWSRTRFTMDEGFTRAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           ++    L  +G +Y G          Q    D +            +  PL+  DGS  Y
Sbjct: 165 QEAFIRLYNEGLIYRGDYLVNWCPVDQTALSDEEVDNVEQDGHLWYIRYPLV--DGS-GY 221

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               +A    + E        ++G             A AV  +  +   L+ + VRL  
Sbjct: 222 IT--IAT--TRPET-------MLGD-----------TAVAVHPEDERYRHLIGKKVRLPL 259

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            G  I +       I   HV  + G+ +++      KN 
Sbjct: 260 IGREIPI-------IADEHVKRDFGAGALKITPGHDKND 291


>gi|303231495|ref|ZP_07318225.1| glutamate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513838|gb|EFL55850.1| glutamate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 486

 Score = 59.5 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 94/278 (33%), Gaps = 30/278 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 6   APSPTGPFHIGGARSALFNWLLAR--KEKGTFVLRIE-DTDLSRSTRESEENIKASLQWL 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             N D  +  G   G Y +    +L  + +  LL+  +  +     ++       ++ R 
Sbjct: 63  GMNWDEGIDVGGENGPYRQTERLDLYKEVTQRLLDEDKAYECFCTAEELDEVRQAQMERG 122

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    N        E+              +    +G      L  P +KT    DM R 
Sbjct: 123 ETPKYNGHCCHLTEEEK-------------EKYRAEGRKPTIRLRVPLNKTYAFDDMVRG 169

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F S  VGD     ++KSDG   Y   + A     +     ++I     +H     R 
Sbjct: 170 HVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMKITHVIR--AEEHLSNTPRQ 221

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            A+  A+  +     + +   + L       KMSKR G
Sbjct: 222 MAIYEALGWE-----IPIFGHISLILGKDYKKMSKRHG 254


>gi|223932581|ref|ZP_03624581.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898691|gb|EEF65052.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 883

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        IR+    L +  D          G    +
Sbjct: 99  -REQGVTRYDLGREKFLDKVWEWK-DEYAATIREQWGKLGLSLDYQRDRFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|330832310|ref|YP_004401135.1| valyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306533|gb|AEB80949.1| valyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 883

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        IR+    L +  D          G    +
Sbjct: 99  -REQGVTRYDLGREKFLDKVWEWK-DEYAATIREQWGKLGLSLDYQRDRFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|146318113|ref|YP_001197825.1| valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320294|ref|YP_001200005.1| valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751303|ref|YP_003024444.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753204|ref|YP_003026344.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755027|ref|YP_003028167.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|145688919|gb|ABP89425.1| Valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691100|gb|ABP91605.1| Valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815592|emb|CAZ51175.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817491|emb|CAZ55232.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819449|emb|CAR44947.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557873|gb|ADE30874.1| Valyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
 gi|319757585|gb|ADV69527.1| valyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 883

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        IR+    L +  D          G    +
Sbjct: 99  -REQGVTRYDLGREKFLDKVWEWK-DEYAATIREQWGKLGLSLDYQRDRFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|229015441|ref|ZP_04172443.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021646|ref|ZP_04178233.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739649|gb|EEL90058.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745860|gb|EEL95860.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 660

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVSGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|163938046|ref|YP_001642930.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009548|ref|ZP_04166775.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053885|ref|ZP_04195320.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131046|ref|ZP_04259959.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163860243|gb|ABY41302.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228652383|gb|EEL08307.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721426|gb|EEL72946.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751692|gb|EEM01491.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 660

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 115/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVSGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G    G   P      +    +     F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIME-GDKVVGGKSPDSGHAVELVREESY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|229165027|ref|ZP_04292823.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228618412|gb|EEK75441.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 660

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 115/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVSGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G    G   P      +    +     F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIME-GDKVVGGKSPDSGHAVELVREESY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|317473020|ref|ZP_07932321.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899503|gb|EFV21516.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 756

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS +   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYNPSEIEDRLYQKWLDNKYFHAEVDHSKKPFTIVIPPPNITGKLHMGHALDETLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +  +AL     +  +             
Sbjct: 68  RFKKMQGYNTL-------WQPGTDHASIATEVKIIEALKEEGIEKEDLGR--EKFLERAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y   +++                         LK L    D          G   
Sbjct: 119 EWKEEYGGTIVSQ------------------------LKKLGSACDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEKGYIYKG 172


>gi|75759600|ref|ZP_00739686.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74492891|gb|EAO56021.1| Methionyl-tRNA synthetase  / Protein secretion chaperonin CsaA
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 669

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 26  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 76  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 126

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 127 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 183

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 184 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 240

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 241 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 300

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 301 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 349


>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511828|sp|C6BS23|SYC_DESAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 485

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 121/368 (32%), Gaps = 59/368 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R +VV D L   + F GY+VT      D   +I   A               ++L
Sbjct: 36  HIGHARSSVVFDILVRYLRFKGYDVTFVRNFTDIDDKIINRA--------NETGVTSTEL 87

Query: 197 PEGYYPGVYLKHVGKEL--ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
            E +    Y+      +  AD       + PE           ++    +I  D      
Sbjct: 88  AEKFIGEFYVDMDKLNILRADIEPKCTEHIPE----------MIELTQTLIEKDHAYATP 137

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D++     F        R+I D       +  G    P  +     D     L   + 
Sbjct: 138 SGDVYFKVRSFDDYGKLSGRNIED-------LQSGARIQPGEEKQDPLDF---ALWKAAK 187

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-- 372
                 + P     G   +     A  +  +E  FD    + G          E   A  
Sbjct: 188 PGEPSWESPW--GQGRPGWHLECSAMSEKYFELPFD----IHGGGQDLSFPHHENEIAQS 241

Query: 373 --AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A  ++ A+  V        +      KMSK  G+F T+R ++D+   +++R+ +L   
Sbjct: 242 EAATGKEMARFWVH-----NGFVQINSEKMSKSLGNFFTIRDILDKFMPETLRYFLLTMH 296

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-- 488
               LDF F  ++E  K              R ++   +     L+   + +  +P+E  
Sbjct: 297 YRSPLDFSFEALEEAEKG------------IRRVYSALEQTAEALNKSKWSKAALPEEVL 344

Query: 489 SEFDTSEL 496
           +E + +E 
Sbjct: 345 AEIEDAEK 352


>gi|228993197|ref|ZP_04153118.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999247|ref|ZP_04158827.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760444|gb|EEM09410.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766523|gb|EEM15165.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 881

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      +     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYKWWLDGKYFEAKGDAEKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G    +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +G +Y G         T+    D
Sbjct: 160 NKVFVQLYEKGLIYRGEYIINWDPATRTALSD 191



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+D+ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEDIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEVAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|288817914|ref|YP_003432261.1| glutamyl- and glutaminyl-tRNA synthetase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787313|dbj|BAI69060.1| glutamyl- and glutaminyl-tRNA synthetase [Hydrogenobacter
           thermophilus TK-6]
 gi|308751512|gb|ADO44995.1| glutamyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 470

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 100/295 (33%), Gaps = 40/295 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I   + +PTG +H+G+ R A+     A             ++      +I    L   
Sbjct: 1   MVITRFAPSPTGYLHLGNARTAIFSYLFAR------------HHRGKFILRIEDTDLERS 48

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            +  +A+   D       +   Y +    ++  +Y+  L+             +     +
Sbjct: 49  TKEFEAMLLEDLKWLGLDWDEFYRQSERFDIYREYAQRLIELGHAYPC-----FCTPEEL 103

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQK 301
            I R + +   I +         + G    +    ++ L   G  Y      P  +    
Sbjct: 104 SIERQEAEKKGIPYR--------YSGKCRVLDKKQVEELKESGKSYTIRFKVPYGEYVVF 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ +  +   +   GD     +++SDG+ TY    +         G  ++I   G DH 
Sbjct: 156 EDLIKGHIAINTDDFGDF---VIIRSDGTPTYNFVVV---IDDALMGITHVIR--GEDHI 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
               +   +  A+     +   L    V L  D    K+SKR G  +++R+  +E
Sbjct: 208 PNTPKQILIYRALGFDVPKFAHL---PVILGED--RSKLSKRHG-AVSVRNYREE 256


>gi|228905835|ref|ZP_04069733.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853775|gb|EEM98534.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 660

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|110611931|ref|NP_080654.3| DALR anticodon-binding domain-containing protein 3 [Mus musculus]
 gi|81911495|sp|Q6PJN8|DALD3_MOUSE RecName: Full=DALR anticodon-binding domain-containing protein 3
 gi|40226606|gb|AAH13483.2| DALR anticodon binding domain containing 3 [Mus musculus]
 gi|74151605|dbj|BAE41151.1| unnamed protein product [Mus musculus]
 gi|74178874|dbj|BAE42679.1| unnamed protein product [Mus musculus]
 gi|74211682|dbj|BAE29197.1| unnamed protein product [Mus musculus]
 gi|148689357|gb|EDL21304.1| mCG16494, isoform CRA_a [Mus musculus]
          Length = 538

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 31/190 (16%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              D +   +++F ML       L      +  +  ++  F V Y  AR  ++F   K  
Sbjct: 358 ETFDILSVATIKFEMLSTAPQSQLLLAHSTISTKGTKSGTF-VMYNCARLATLFEGYKHG 416

Query: 472 FPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI-------ENATIAQEP--YK- 520
                +  FP  + +      D  E  L+     +  V+       +  ++A  P  +  
Sbjct: 417 TEQGLYPTFPLVSSLDFSLLHDEGEWLLL-----FNSVLPFLDLLSQTVSLAGTPGLHIP 471

Query: 521 -----LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINS 572
                +  +L  L+  F  +++      R+  +      L      RLQL+ AV  + ++
Sbjct: 472 VRTEMVCKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFARLQLLRAVREVFHT 525

Query: 573 GLNIIGVESP 582
           GL ++G+   
Sbjct: 526 GLAMLGLPPL 535


>gi|241761929|ref|ZP_04760014.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373609|gb|EER63181.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 521

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 128/425 (30%), Gaps = 66/425 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA     +G +V  +   ++ G ++   A +   R  + +  
Sbjct: 14  PNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN---RDIEPIAL 70

Query: 192 NDS-----DLPEGYYPGVYLKHVGKELADKYSSE---LLNFPE---------EKWLPIVK 234
            D         +  Y   Y + +    A+ Y +         +         E W  I  
Sbjct: 71  ADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRYEGWYSIRD 130

Query: 235 D--YSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +  Y  + ++   + + L       +  + E  F R          D L      +   +
Sbjct: 131 EAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQ-----DKLLAYYEAHPDFI 185

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-------AYFKCK 344
            P   +      +         +    D   P+  S G   Y   D        A +   
Sbjct: 186 QPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGYPDN 245

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMP 397
            ER FD      I+V+G D    + R  AV   A  ++   A    +      L R    
Sbjct: 246 KER-FDRYWPADIHVIGKD----IIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRG--- 297

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +    +    G D +R+ +L                    ++  +  +  
Sbjct: 298 EKMSKSVGNVVDPIDMAKLYGVDQIRYFLLRE--------------VTFGQDGSYSHEAI 343

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515
             R  +               +  +N     S  DT   +  L+  +A  P  +  A   
Sbjct: 344 VNRINADLANDFGNLAQRSLSIITKNGAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNN 403

Query: 516 QEPYK 520
             P +
Sbjct: 404 VAPNQ 408


>gi|256844495|ref|ZP_05549981.1| glutamyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262047598|ref|ZP_06020553.1| glutamyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|256613573|gb|EEU18776.1| glutamyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260572174|gb|EEX28739.1| glutamyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 499

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 105/309 (33%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++  E  +  
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEGEAYYSY 110

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             ++       +      +A  +         ++       I+   D    +G      +
Sbjct: 111 KTEEELEAQREEQ-----RAAGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|303228976|ref|ZP_07315786.1| glutamate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516390|gb|EFL58322.1| glutamate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 486

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 92/278 (33%), Gaps = 30/278 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 6   APSPTGPFHIGGARSALFNWLLAR--KEKGTFVLRIE-DTDLSRSTRESEENIKASLQWL 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             N D  +  G   G Y +    +L  + +  LL+  +  +     ++       ++ R 
Sbjct: 63  GMNWDEGIDVGGENGPYRQTERLDLYKEVTQRLLDEDKAYECFCTAEELDEVRQAQMERG 122

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    N        E+              +    +G      L  P +KT    DM R 
Sbjct: 123 ETPKYNGHCCHLTEEEK-------------EKYRAEGRKPTIRLRVPLNKTYAFDDMVRG 169

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F S  VGD     ++KSDG   Y   + A     +     ++I     +H     R 
Sbjct: 170 HVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMKITHVIR--AEEHLSNTPRQ 221

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            A+  A+  +           + L       KMSKR G
Sbjct: 222 MAIYEALGWEIPTFGH-----ISLILGKDYKKMSKRHG 254


>gi|228898792|ref|ZP_04063075.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228860817|gb|EEN05194.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 660

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|304438853|ref|ZP_07398777.1| glutamate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372654|gb|EFM26236.1| glutamate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 493

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 106/292 (36%), Gaps = 46/292 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +      +  R  Y+  A   I  L  
Sbjct: 9   APSPTGFLHIGGLRTALYNYLYAKKNGGDFILRI-----EDTDRTRYVEGA---IENLIH 60

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           ++ W      +  + + + ++ E    G Y++    ++  KY  EL+      +      
Sbjct: 61  ALDWSGVHVDEGVVLDENGNITEKGDCGPYIQSSRLDIYKKYVDELIEKGY-AYYCFCSV 119

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             ++A+ +  R  +K    ++D               I +    +A  G  Y   L  P 
Sbjct: 120 ERLEALREEQR--IKGKVPKYDGLCR--------SVSIEEAKKRIAA-GEEYVVRLKLPH 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  D+ R  ++  S  +    D+ L+KSDG  TY    +A     +  G  ++  V
Sbjct: 169 DRNIRFHDLVRGDVVINSDEID---DQVLMKSDGFPTYH---MAVVVDDHLMGITHI--V 220

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            G +      +   +  A+     +        +    +    K+SKR GD 
Sbjct: 221 RGEEWLSSTPKHVYLYEALGWDVPEFVH-----LPTVLNKDHKKLSKRQGDV 267


>gi|229006794|ref|ZP_04164427.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754416|gb|EEM03828.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 867

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      +     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYKWWLDGKYFEAKGDAEKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G    +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +G +Y G         T+    D
Sbjct: 151 QLYEKGLIYRGEYIINWDPATRTALSD 177



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+D+ G+D++RF +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEDIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEVAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|154684610|ref|YP_001419771.1| glutamyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166200159|sp|A7Z0L4|SYE_BACA2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|154350461|gb|ABS72540.1| GltX [Bacillus amyloliquefaciens FZB42]
          Length = 483

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 99/292 (33%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---SQGGKFIIRIEDTDKKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++  KY  ELL      K     ++   +   +I R 
Sbjct: 67  GMDWDESVDIGGEYGPYRQSERNDIYKKYYEELLEKGLAYKCFCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +H     E+              +    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGKHRNLTQEEQ-------------ERFLAEGRQPSIRFRVPEGKIIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAIDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A         V +   + L  +    K+SKR    I      DE+G 
Sbjct: 226 IMIFQAFGWD-----VPVFGHMTLIVNESRKKLSKRDESIIQFIEQYDELGY 272


>gi|218895174|ref|YP_002443585.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218546007|gb|ACK98401.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 660

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|56551988|ref|YP_162827.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543562|gb|AAV89716.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 521

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 128/425 (30%), Gaps = 66/425 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA     +G +V  +   ++ G ++   A +   R  + +  
Sbjct: 14  PNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN---RDIEPIAL 70

Query: 192 NDS-----DLPEGYYPGVYLKHVGKELADKYSSE---LLNFPE---------EKWLPIVK 234
            D         +  Y   Y + +    A+ Y +         +         E W  I  
Sbjct: 71  ADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRYEGWYSIRD 130

Query: 235 D--YSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +  Y  + ++   + + L       +  + E  F R          D L      +   +
Sbjct: 131 EAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQ-----DKLLAYYEAHPDFI 185

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-------AYFKCK 344
            P   +      +         +    D   P+  S G   Y   D        A +   
Sbjct: 186 QPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGYPDN 245

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMP 397
            ER FD      I+V+G D    + R  AV   A  ++   A    +      L R    
Sbjct: 246 KER-FDRYWPADIHVIGKD----IIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRG--- 297

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +    +    G D +R+ +L                    ++  +  +  
Sbjct: 298 EKMSKSVGNVVDPIDMAKLYGVDQIRYFLLRE--------------VTFGQDGSYSHEAI 343

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515
             R  +               +  +N     S  DT   +  L+  +A  P  +  A   
Sbjct: 344 VNRINADLANDFGNLAQRSLSIIAKNGAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNN 403

Query: 516 QEPYK 520
             P +
Sbjct: 404 VAPNQ 408


>gi|257865153|ref|ZP_05644806.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257871477|ref|ZP_05651130.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799087|gb|EEV28139.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257805641|gb|EEV34463.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 881

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 12  NPQEVEAGRYQDWLEHDRFKPSGNKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + ++ L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEEKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ EE                 IR+    L +  D          G    +
Sbjct: 114 --KFVEQVWDWKEE-------------YAGHIREQWAKLGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|169831567|ref|YP_001717549.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|254782388|sp|B1I4A3|SYI_DESAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169638411|gb|ACA59917.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 930

 Score = 59.2 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 27/187 (14%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A AV+ +     VL    V    D    KMSK  G+ I    
Sbjct: 557 YLEGSDQHRGWFNSSLTTAVAVTGEPPYRAVLTHGFVV---DEQGRKMSKSLGNVIEPME 613

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ E+G+D +R  +        L      +K+ S+         AY + R+ FR      
Sbjct: 614 VLKELGADILRLWVCSADYRGDLAVSPGILKQMSE---------AYRKIRNTFRFLLGNL 664

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            D D D   R+ +      +     L+  L      +  A    E +++          +
Sbjct: 665 QDFDPD---RDTVAYTELTELDRYALLK-LHRVTDRVLRAYREYEFHQV----------Y 710

Query: 533 HGHWSHG 539
           H  +++ 
Sbjct: 711 HTLYNYC 717


>gi|118475810|ref|YP_892961.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118415035|gb|ABK83454.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 669

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 26  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 76  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 126

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 127 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 183

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 184 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 240

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 241 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 300

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 301 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 349


>gi|300119133|ref|ZP_07056834.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298723455|gb|EFI64196.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 660

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|315641423|ref|ZP_07896496.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
 gi|315482810|gb|EFU73333.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
          Length = 898

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  N        +I     N TG +H+GH     + D +   
Sbjct: 30  NPQEVEAGRYQKWLDQDLFKPNGDQTAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 89

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L             G+    +G+E 
Sbjct: 90  KRMQGFDTL-------WLPGMDHAGIATQAKVEEKLRE----------QGISRYDLGRE- 131

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    L +  D          G    +
Sbjct: 132 --KFVDQVWEWKEE-------------YAGHIREQWSKLGLSLDYSRERFTLDEGLSEAV 176

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D +  +    + G       L +DG+
Sbjct: 177 RKVFVTLYEKGLIYRGEYIINWDPQARTALSDIE--VIHKDIEGAFYHMSYLLADGT 231


>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 484

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 72/402 (17%), Positives = 134/402 (33%), Gaps = 60/402 (14%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
               ++     GK           N     H+GH R AV  D +   + + GYEVT   Y
Sbjct: 10  RKKEKFTPLETGKVRMYVCGLTVQNYA---HIGHIRSAVNYDVIRRYLEYKGYEVT---Y 63

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           + +       +   +  R ++          EG  P         ELADKY+   L   E
Sbjct: 64  VQN----FTDINEKIVARARE----------EGLRP--------LELADKYTKAYLEDIE 101

Query: 227 EKWLPIVKDYS-----VQAMMKIIRDDLK---ALNIQHDIFISEDDFHRGDPSPIRDIID 278
           +  +     Y      ++ ++K+++  L    A  +  +++ S + F        R++ +
Sbjct: 102 KMKIKRADVYCRATDTIKEIIKMVKKLLDKGYAYEVNGNVYFSVEKFSDYGKLSGRNLEE 161

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
                  +  G       +     D     L  ++       D P  K    +    + +
Sbjct: 162 -------MQAGARVEVNEEKRHPMDF---ALWKKAPAGEISWDSPWGKGWPGWHIECSAM 211

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDG 395
           +  K   +R     I + G          E   A + + + +K  +   L        + 
Sbjct: 212 S-IKYLGKR-----IDIHGGGTDLIFPHHENEIAQSESCTGEKPFVKYWLHNG---SVNL 262

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+F T+R ++ E   D VR+ +L +     +DF+F +V+   K      + 
Sbjct: 263 KGEKMSKSLGNFFTVREILKEFKPDEVRYFLLTKHYRSPIDFNFEEVEAARKS--WRKLV 320

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             Y     I  +       +  +    N I         E +
Sbjct: 321 NTYQVMVQILEKGVITKNKITENTKGENTIISILNKKEKEFE 362


>gi|261409543|ref|YP_003245784.1| glutamyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|329925593|ref|ZP_08280434.1| glutamate--tRNA ligase [Paenibacillus sp. HGF5]
 gi|261286006|gb|ACX67977.1| glutamyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|328939722|gb|EGG36064.1| glutamate--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 487

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 100/294 (34%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A     +G  + R   I D   + N         +Y +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR--KNNGKFIIR---IEDTDVKRNVEGGEQSQLKYLK 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII- 245
            L  + D  +  G   G Y +    ++  +Y  +LL+          ++   Q   + + 
Sbjct: 65  WLGMDWDESVDVGGEYGPYRQTERLDIYKEYWQDLLDRGLAYRCYCTEEELEQEREEQMA 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +    + +H     E                 L  +G V       P+ +     DM 
Sbjct: 125 RGETPRYSGKHRDLTEEQR-------------QALEAEGRVASIRFRVPEDRVYTFDDMV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           +  + F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 172 KGTISFNSKETGDF---VIVKKDGIPTY---NFAVALDDHLMKISHVLR--GEDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           R   +  A   +  Q   +      L       K+SKR    I      D++G 
Sbjct: 224 RQLMIYEAFGWEPPQFGHM-----TLIVGEDHKKLSKRNESIIQFIEQYDQLGY 272


>gi|229089170|ref|ZP_04220452.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228694133|gb|EEL47814.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 660

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|229170889|ref|ZP_04298492.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612555|gb|EEK69774.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 660

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGEKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKIFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|167756028|ref|ZP_02428155.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
 gi|237734013|ref|ZP_04564494.1| cysteinyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167704020|gb|EDS18599.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
 gi|229382839|gb|EEO32930.1| cysteinyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 449

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 127/391 (32%), Gaps = 57/391 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V D L     + GY+VT      D   +I         +  +
Sbjct: 31  CGPTVYNYVHIGNTRPMIVFDVLRRTFEYLGYKVTFVSNFTDVDDKI--------IKAAK 82

Query: 188 ALYNNDSDLPEGYYPG-VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           A    + +L + Y      ++     L   Y+  + N             ++ A++K I 
Sbjct: 83  AEGITEKELTDKYIAAYEDVRRNLNLLFPTYAPRVTN-------------TMDAIIKFID 129

Query: 247 DDLK---ALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +K   A  +  D++       ++ +     I D++   + +             +  +
Sbjct: 130 NLVKSGYAYEVDGDVYFRVSKIDEYGQLSGIKIEDLVAGASER-----------IDENDK 178

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           K +     L  + T  G   D P  K  G   +    +      +E G    I + G   
Sbjct: 179 KEESTDFALW-KKTDEGIRFDSPWSK--GRPGWHTECVVMINDIFEGGK---IDIHGGGQ 232

Query: 361 SGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                  E  +A +++     I         +  D    KMSK  G+ I  + +V E+G 
Sbjct: 233 DLKFPHHENEIAQSMACHHHPIAHTWMHNQMINID--NQKMSKSLGNVIWAKDMVAELGC 290

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKE---------NPVFYVQYAYARCRSIFRQAKD 470
           + V++ ML       L+     +    KE         +   Y+Q  +    +  + A D
Sbjct: 291 NVVKWFMLSSHYRNPLNLTEEVLNSVKKEVAKVDNVIKSVSLYLQVNHIANENYNKAAVD 350

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                  D    ++   +      +L L   
Sbjct: 351 GMVGALEDDLNTSLALTKILDQVKKLNLAFR 381


>gi|52145179|ref|YP_081651.1| methionyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51978648|gb|AAU20198.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 660

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|49477589|ref|YP_034392.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196036355|ref|ZP_03103752.1| methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218901239|ref|YP_002449073.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228925292|ref|ZP_04088389.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931541|ref|ZP_04094448.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943845|ref|ZP_04106231.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229119701|ref|ZP_04248963.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|301051774|ref|YP_003789985.1| methionine--tRNA ligase [Bacillus anthracis CI]
 gi|49329145|gb|AAT59791.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|195990985|gb|EDX54956.1| methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218535747|gb|ACK88145.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228663726|gb|EEL19304.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228815802|gb|EEM62037.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828093|gb|EEM73820.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834339|gb|EEM79879.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|300373943|gb|ADK02847.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 660

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|196047404|ref|ZP_03114617.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862090|ref|YP_002747468.1| methionyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229182433|ref|ZP_04309685.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|196021806|gb|EDX60500.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788827|gb|ACO29044.1| methionine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228601013|gb|EEK58581.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 660

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|227894571|ref|ZP_04012376.1| glutamyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227863730|gb|EEJ71151.1| glutamyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 499

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 108/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  K  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWKPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|15233258|ref|NP_191100.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|7076783|emb|CAB75898.1| methionyl-tRNA synthetase (AtcpMetRS) [Arabidopsis thaliana]
 gi|332645858|gb|AEE79379.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 616

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 132/408 (32%), Gaps = 64/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D++A      G +V      ++ G +I T A +           
Sbjct: 80  VNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAA----------- 128

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           N  + PE             +  D    + +   + K   IVK++  +      I R D 
Sbjct: 129 NGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADY 188

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E +    +  P+  +  +       +     Y+  L    ++  +  
Sbjct: 189 EGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFV 248

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLK-------SDGSYTYFAAD--LAYFKCKYERG- 348
                ++  Q   +S +    + R L+         D    Y   D  L Y     E   
Sbjct: 249 QPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTEDNK 308

Query: 349 ---------FDN--MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                    F     ++++G D    H+ Y     A+  +   +  ++         L +
Sbjct: 309 QQNLETAVSFGWPASLHLIGKDILRFHAVY---WPAMLMSAGLELPKMVFGHGF---LTK 362

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---KNSELLDFD-FCKVKEQSKEN 449
           DGM  KM K  G+ +    +V + G D+VR+  L      N      D F K+      N
Sbjct: 363 DGM--KMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLAN 420

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            +  +     R   + ++  +    +D  +    V  +++     E  
Sbjct: 421 TIGNLL---NRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKA 465


>gi|312144267|ref|YP_003995713.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904918|gb|ADQ15359.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 484

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 108/312 (34%), Gaps = 41/312 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+  D +   + +SGYEV  EY  N        +   +  R ++      ++L
Sbjct: 37  HIGHIRSAINYDVIRRYLEYSGYEV--EYISN-----FTDINEKIVKRAEEE-GMTAAEL 88

Query: 197 PEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
            + Y       ++    + AD+Y     N  E           ++ + K+I     A  I
Sbjct: 89  ADKYANAFLEDIRSFNIKAADQYLRVSENIDE----------IIEMVSKLIEKGY-AYEI 137

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D++ S D F        R I D       +  G             D     L  +  
Sbjct: 138 NGDVYFSVDSFEDYGKLSGRSIED-------MQAGARIAVNEDKKNPLDF---ALW-KKV 186

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAA 373
             G+  D P    +G   +     A    +    FD    + G          E  +A +
Sbjct: 187 EAGEGWDSPW--GEGWPGWHIECSAMSMKRLGATFD----IHGGGVDLIFPHHENEIAQS 240

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            +    +          +   G   KMSK  G+F T R V+ E  +  +R+ +L R    
Sbjct: 241 EAYSGQKFVKYWLHNGTVNLSGE--KMSKSQGNFFTSREVLKEFSAQVIRYFLLTRHYRS 298

Query: 434 LLDFDFCKVKEQ 445
            +DF + K++E 
Sbjct: 299 PIDFSYEKLEEA 310


>gi|315037579|ref|YP_004031147.1| glutamyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312275712|gb|ADQ58352.1| glutamyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 499

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 108/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  K  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWKPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|325956061|ref|YP_004286671.1| glutamyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325332626|gb|ADZ06534.1| glutamyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327182875|gb|AEA31322.1| glutamyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 499

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 108/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  K  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWKPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|258510147|ref|YP_003183581.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476873|gb|ACV57192.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 650

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 105/326 (32%), Gaps = 37/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+GH    V  D +A      GY+V      ++ G +I   A        +A  +
Sbjct: 14  PNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAEQAGL-EPKAFLD 72

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII------ 245
                 +  +  + + +       +   E +     + L    D  +             
Sbjct: 73  PIIAWIQDLWKKLDISYDDFIRTTEARHERVVEQIFERLLQQGDIYLSEYQGWYCTPCES 132

Query: 246 -RDDLKALNIQHDIFISEDDFHRGDPS--PIRDIIDNLARQGYVYEGILPPPKSK----- 297
              + + ++ +      E  F R +     +   +D L +      G + P   K     
Sbjct: 133 YWAERELVDGKCPQCGREVQFVREESYFFRMSKYVDRLLQYYEENPGFIEPVSRKTEMIK 192

Query: 298 -----TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-----DLAYFKCKYER 347
                  Q   + R    +   +  +      +  D    Y +A     D A  + K+ER
Sbjct: 193 NFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAIGYLSDDADERVKFER 252

Query: 348 GFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            +   ++V+G D    H+ Y      +  A+     +          L + G   KMSK 
Sbjct: 253 YWPADVHVVGKDIVRFHAVY---WPIILMALGLPLPKKVFGHGFF--LVKGG---KMSKS 304

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ I    +VD  G D+ R+ +L  
Sbjct: 305 KGNVIDPLSLVDRYGRDAFRYFLLRE 330


>gi|228963136|ref|ZP_04124306.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796521|gb|EEM43959.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 563

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|270292202|ref|ZP_06198417.1| valine--tRNA ligase [Streptococcus sp. M143]
 gi|270279730|gb|EFA25572.1| valine--tRNA ligase [Streptococcus sp. M143]
          Length = 883

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEADRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLEKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|313893250|ref|ZP_07826825.1| glutamate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442146|gb|EFR60563.1| glutamate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 489

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 97/285 (34%), Gaps = 44/285 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 9   APSPTGPFHIGGARSALFNWLLAR--KEEGTFVLRIE-DTDLSRSTRESEENIKASLQWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D  +  G   G Y +    EL  + +  LL            D           ++
Sbjct: 66  GMNWDEGVDVGGENGPYRQTERLELYKEVTQRLL------------DEGHAYECYCSAEE 113

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQGYVYEGI-----LPPPKSKTTQ 300
           L A+         +D   RG+        D +D   +  Y+ EG      L  P +KT  
Sbjct: 114 LDAVR--------QDQMDRGETPKYNGHCDHLDEETKAKYIAEGRKPTIRLRVPLNKTYT 165

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R ++ F S  VGD     ++KSDG   Y   + A     +  G  ++I     +H
Sbjct: 166 FDDMVRGRVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMGITHVIR--AEEH 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A+              + L       KMSKR G
Sbjct: 218 LSNTPRQMAIYEALGWDIPTFGH-----ISLILGKDYKKMSKRHG 257


>gi|225870967|ref|YP_002746914.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700371|emb|CAW94709.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 883

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K     I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQAWLDQDVFKPSGDKKAKPYAIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    L +  D          G    +
Sbjct: 99  -REQGISRYDLGRDKFLDKVWEWK-DEYAATIKEQWGKLGLSLDYARDRFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDSAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGF-------------DNMIYVMGSDHS 361
           +         D+A      +  +             + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGQHVVLPIVNKLIPIVGDEHA 264


>gi|158321682|ref|YP_001514189.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141881|gb|ABW20193.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 654

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 112/339 (33%), Gaps = 65/339 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D LA    F+GY+V           Q       +    +     
Sbjct: 15  PSGRLHIGHTYTTVAADVLARFKRFTGYDV-----------QF------LTGTDEHGEKI 57

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            ++    G  P  YL  + +E+ D +    +++       I    + Q   + ++   + 
Sbjct: 58  QEAAEKAGVSPKEYLDKIVEEIKDLWKKMDISYD------IFIRTTDQEHEERVQKIFQT 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L  + DI+ SE +     P         L   G+V      P      +       +   
Sbjct: 112 LYDKGDIYKSEYEGWYCTPCESFWTETQLKE-GHVCPDCNRPAHLAKEEAYFFKLSKYQD 170

Query: 312 RSTMVGDDVDRPLL---KSDGSYTYFAA----DLAYFKCKYERG----FD--NMIYVM-- 356
           R     ++         + +     F      DL   +  ++ G    FD  ++IYV   
Sbjct: 171 RLLQYFEEHPEICYPESRKNEMVNNFLKPGLEDLCVSRTTFDWGIKVPFDPKHIIYVWFD 230

Query: 357 -----------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD---------- 394
                      GSD+     +   A    V ++  + + ++   + +  +          
Sbjct: 231 AVCNYITALGYGSDNEETFNKYWPADVHLVGKEIVRFHTIIWPAILMALEIPLPKMVYGH 290

Query: 395 ----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                   KMSK  G+ +    +++  G D++++ +L  
Sbjct: 291 GWILFGADKMSKSKGNIVYPEPLIERYGLDAIKYFLLRE 329


>gi|229541183|ref|ZP_04430243.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325603|gb|EEN91278.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 922

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 71/383 (18%), Positives = 127/383 (33%), Gaps = 71/383 (18%)

Query: 214 ADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
            D +  ++L   EE  W P+  +  +  M++  R D      +A  +   +F +E+    
Sbjct: 414 VDMFRDDILKAVEEVNWTPVWGELRMHNMIRD-RGDWCISRQRAWGVPIPVFYAENGEAI 472

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                IR + D   + G            + EG   P       K + D   + F S   
Sbjct: 473 ITEETIRHVSDLFRKHGSNVWFEREAKDLLPEGFTHPGSPNGVFKKETDIMDVWFDS--- 529

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      L   +G                +R  D  +Y+ GSD   G+       + AV+
Sbjct: 530 GSSHQGVLAAQEG---------------LKRPAD--LYLEGSDQYRGWFNSSLITSVAVT 572

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            +     VL    V    DG   KMSK  G+ I    VV+++G+D +R  +        +
Sbjct: 573 GRAPYDGVLSHGFV---LDGEGRKMSKSLGNTILPGKVVEQLGADIIRLWVASVDYQADV 629

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +K+ S+          Y + R+ FR       D D    P        E    +
Sbjct: 630 RVSNEILKQVSE---------VYRKIRNTFRFMLGNLNDFD----PARHQVAYEELREVD 676

Query: 496 LQLIVHLAEYPRVIENATIAQEP----YKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
             ++V L +  + +  A    E     + +  +    A+     +        L    A+
Sbjct: 677 RFMLVKLNKLVKEVREAYERYEFATIYHAVNNFC---ATDLSSFYMDF-AKDVLYIELAD 732

Query: 552 NRKLTMMRLQLVHAVASIINSGL 574
           N +          A+ +++   L
Sbjct: 733 NPERR--------AMQTVLYECL 747


>gi|196041780|ref|ZP_03109070.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196027400|gb|EDX66017.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 660

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     +   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKI---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|228983294|ref|ZP_04143508.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229153817|ref|ZP_04281948.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629621|gb|EEK86317.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228776408|gb|EEM24760.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 660

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|42779117|ref|NP_976364.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42735032|gb|AAS38972.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 660

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|206977934|ref|ZP_03238821.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|229194429|ref|ZP_04321233.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206743840|gb|EDZ55260.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|228589019|gb|EEK47033.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 660

 Score = 58.8 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|229159212|ref|ZP_04287237.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624227|gb|EEK81028.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 660

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVSGIKELWKKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTAHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|217957614|ref|YP_002336156.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229136885|ref|ZP_04265513.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217064186|gb|ACJ78436.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228646550|gb|EEL02756.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 660

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|6094396|sp|O86083|SYE_LACDE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|3450895|gb|AAC32611.1| glutamyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus]
          Length = 500

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 101/306 (33%), Gaps = 35/306 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      A 
Sbjct: 1   MANKKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDADTER-NVEGGAE 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D     G   G Y +   K++  KY  +LL   E K   
Sbjct: 59  SQIENL----HWLGIDWDEGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYY 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             K        +  +   +A+ I         ++       I+        +G      +
Sbjct: 109 SFKTEEELEAQREEQ---RAMGIAPHYVY---EYEGMTTDEIKQAQAEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+  T +  D+ +  L F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPEGVTYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTY---NFAVVIDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A+  +      +   +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHISNTPKQLCVYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFI 271

Query: 412 HVVDEV 417
               E+
Sbjct: 272 EQYREL 277


>gi|324324028|gb|ADY19288.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 660

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|195978584|ref|YP_002123828.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975289|gb|ACG62815.1| valyl-tRNA synthetase ValS [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 883

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQAWLDQDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    L +  D          G    +
Sbjct: 99  -REQGISRYDLGRDKFLDKVWEWK-DEYAATIKEQWGKLGLSLDYARDRFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGF-------------DNMIYVMGSDHS 361
           +         D+A      +  +             + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGQHVVLPIVNKLIPIVGDEHA 264


>gi|284033606|ref|YP_003383537.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812899|gb|ADB34738.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 523

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 75/488 (15%), Positives = 154/488 (31%), Gaps = 86/488 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     V GD L    A  G    R++Y+         +  S   +  
Sbjct: 15  YVTAAP----HIGSAYTTVAGDVLTRWHAQRG---ERKWYLTGTDEHGEKVLRSAQAQGM 67

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKI 244
                 D  + + + P      +          + +   E +    V+++  ++     +
Sbjct: 68  SPQEWTDKLVEQAWKPAWVDVDIAY-------DDFIRTTEPRHTERVQEFVQALYDQGDV 120

Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            + + + L  +  + F    D    D    R +I     +            +   +  +
Sbjct: 121 YKGEYEGLYCVGCEEFKLPADIRTDDDGTQRCMIHGTELETVSETNYFFRLSAYADKLLE 180

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM- 356
           +      F +     +     +K          DL+  +  ++ G       D+++YV  
Sbjct: 181 LYETHPEFVAPSSARNEVIAFVKQG------LQDLSITRSTFDWGIPVPWDSDHVLYVWV 234

Query: 357 ------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI------ 398
                       G+D   + +   A    V +   + + ++     L   GMP+      
Sbjct: 235 DALLNYATAAGYGADPDRFAELWPADVHLVGKDILRFHAVIWPA-MLIAAGMPVPKQVFA 293

Query: 399 ---------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                    KMSK     I  + + D  GSD+ R+  L       + F           N
Sbjct: 294 HGWLLVGGEKMSKSKLTAIAPKEITDHFGSDAFRYYFLRT-----IQFGADGSFSWEHLN 348

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
            V+  + A        R A  +    D +L      P+ ++   +E  L   LA     +
Sbjct: 349 AVYTSELANGLGNLASRIAAMVGKYFDGEL------PEPTDHGPAEQALADKLA---ETV 399

Query: 510 ENATIAQEPYKLAFY-----LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ-LV 563
             A   +    LAF+     + DL    +G+      + +  +  A +      RL  ++
Sbjct: 400 --AAADRAIDTLAFHDALAAVNDLVGAVNGY-----VSEQEPWKVAKDESQR-ARLATIL 451

Query: 564 HAVASIIN 571
           +  A ++ 
Sbjct: 452 YTSAEVLR 459


>gi|126701164|ref|YP_001090061.1| methionyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252601|emb|CAJ70444.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Clostridium difficile]
          Length = 645

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 137/433 (31%), Gaps = 82/433 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  DT+A    F GY+V      ++ G +I   A+            
Sbjct: 15  PSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI------------ 62

Query: 192 NDSDLPEGYYPGVYLKHVG--KELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRD 247
            +  + E  Y    +K +       D    + +   E++   I++     +     I + 
Sbjct: 63  -EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G+  P     D       V E       SK       DR
Sbjct: 122 EYEGRYCTPCESFWTESQLLEGNKCP-----DCGRETYLVKEESYFFRLSKY-----EDR 171

Query: 307 KQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM---- 356
            + LF+         R         D      +     F    +  FD  ++IYV     
Sbjct: 172 LKELFKDDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDAL 231

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP-------- 397
                       +D   + K   A    V ++  + + ++   + +              
Sbjct: 232 CNYITALGYMTDND-EEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHG 290

Query: 398 ------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                  KMSK  G+ +    +++  G D++++ +L        +F F +    +  N V
Sbjct: 291 WILFADDKMSKSKGNVVYPEPIIERYGIDTLKYFLLR-------EFAFGQDGSYTHRNFV 343

Query: 452 FYVQYA-YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL---------IVH 501
             + Y       ++  +   +    +  + P   +  + + D  E  +         +  
Sbjct: 344 TRINYDLANDLGNLISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDK 403

Query: 502 LAEYPRVIENATI 514
           + ++   +E+   
Sbjct: 404 M-QFHEALESVWK 415


>gi|315649726|ref|ZP_07902810.1| glutamyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315274914|gb|EFU38290.1| glutamyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 487

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 100/294 (34%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A     +G  + R   I D   + N         +Y +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR--KNNGKFIIR---IEDTDVKRNVEGGEQSQLKYLK 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII- 245
            L  + D  +  G   G Y +    ++  +Y  +LL+          ++   Q   + + 
Sbjct: 65  WLGMDWDESVDVGGEYGPYRQTERLDIYKEYWQDLLDRGLAYRCYCTEEELEQEREEQMA 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +    + +H     E                 L  +G V       P+ +     DM 
Sbjct: 125 RGETPRYSGKHRDLTEEQR-------------QALEAEGRVASIRFRVPEERIYTFDDMV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           +  + F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 172 KGTISFNSKETGDF---VIVKKDGIPTY---NFAVALDDHLMKISHVLR--GEDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           R   +  A   +  Q   +      L       K+SKR    I      D++G 
Sbjct: 224 RQLMIYEAFGWEPPQFGHM-----TLIVGDDHKKLSKRNESIIQFIEQYDQLGY 272


>gi|306824631|ref|ZP_07457976.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304433199|gb|EFM36170.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 882

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 -------RYDLGREKFLEKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLIGQNVILPIANKLIPIVGDEHA 263



 Score = 37.2 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 420 AEGEMYVGEEAPKGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 480 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 515

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 516 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 563


>gi|254977164|ref|ZP_05273636.1| methionyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094494|ref|ZP_05323972.1| methionyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255316245|ref|ZP_05357828.1| methionyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518906|ref|ZP_05386582.1| methionyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652085|ref|ZP_05398987.1| methionyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685058|ref|YP_003216343.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260211221|emb|CBA66728.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214733|emb|CBE07412.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 645

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 137/433 (31%), Gaps = 82/433 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  DT+A    F GY+V      ++ G +I   A+            
Sbjct: 15  PSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI------------ 62

Query: 192 NDSDLPEGYYPGVYLKHVG--KELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRD 247
            +  + E  Y    +K +       D    + +   E++   I++     +     I + 
Sbjct: 63  -EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G+  P     D       V E       SK       DR
Sbjct: 122 EYEGRYCTPCESFWTESQLLEGNKCP-----DCGRETYLVKEESYFFRLSKY-----EDR 171

Query: 307 KQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM---- 356
            + LF+         R         D      +     F    +  FD  ++IYV     
Sbjct: 172 LKELFKDDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDAL 231

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP-------- 397
                       +D   + K   A    V ++  + + ++   + +              
Sbjct: 232 CNYITALGYMTDND-EEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHG 290

Query: 398 ------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                  KMSK  G+ +    +++  G D++++ +L        +F F +    +  N V
Sbjct: 291 WILFADDKMSKSKGNVVYPEPIIERYGIDTLKYFLLR-------EFAFGQDGSYTHRNFV 343

Query: 452 FYVQYA-YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL---------IVH 501
             + Y       ++  +   +    +  + P   +  + + D  E  +         +  
Sbjct: 344 TRINYDLANDLGNLISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDK 403

Query: 502 LAEYPRVIENATI 514
           + ++   +E+   
Sbjct: 404 M-QFHEALESVWK 415


>gi|157151226|ref|YP_001449942.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076020|gb|ABV10703.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 882

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 -------RYDLGREKFLEKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLIGQNVILPIANKLIPIVGDEHA 263



 Score = 37.2 bits (85), Expect = 7.7,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 420 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 480 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 515

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 516 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 563


>gi|224475678|ref|YP_002633284.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781694|sp|B9DKW3|SYC_STACT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222420285|emb|CAL27099.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 466

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 143/421 (33%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY+V    Y+++     +
Sbjct: 16  EPLEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYDV---NYVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  + L  +  ++ + Y    Y       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSKELNESVPEIADRYIQAFYEDTGALNVKKATSNPRVMNHMDDIIEFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDKGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       D P  K    +    + +AY     E G    I+ 
Sbjct: 169 ESGEQKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAY----NELGETIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+F+ +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFVLVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EV  D +RF M+       ++++   V+                  +S   + ++ +  
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNMELVES----------------AKSGLERIRNSYQA 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        I  +SE+     QL   LA++ +V+++         +  + YDLA + + 
Sbjct: 325 IEEREAIATDIEDQSEYIEQIDQL---LAQFEKVMDD--DFNTANAITTW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|121534137|ref|ZP_01665962.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307240|gb|EAX48157.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 884

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 37/198 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +             +   +       +I     N TG +H+GH     + D L   
Sbjct: 11  DPATVESKWYKYWEDEGLFHVEVEPDKEPFSIVIPPPNVTGQLHMGHALDNTLQDILIRF 70

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               GY        + AG   QI                                    +
Sbjct: 71  KRMQGYNTLWMPGTDHAGIATQIKV----------------------------------E 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  K      +   EK++  V ++  Q   +II+  LK+L    D          G   
Sbjct: 97  EMLAKEGLTRYDLGREKFIDRVWEWKRQYGSRIIKQ-LKSLGASCDWVRERFTMDEGCSR 155

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R++  +L  +G +Y+G
Sbjct: 156 AVREVFVSLYEKGLIYQG 173



 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 22/130 (16%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+++ G+D++RF ++        + F + +V+      
Sbjct: 517 LVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVTGNTPGNDMRFYWERVESSRNF- 575

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
                             A  I+    F L   +     ++ D +   L     L+ Y +
Sbjct: 576 ------------------ANKIWNASRFVLMNLDGFDAAAQPDPARFALADRWILSRYAQ 617

Query: 508 VIENATIAQE 517
            + + T   E
Sbjct: 618 TVADVTANLE 627


>gi|145332859|ref|NP_001078295.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|332645859|gb|AEE79380.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 533

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 132/408 (32%), Gaps = 64/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D++A      G +V      ++ G +I T A +           
Sbjct: 80  VNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAA----------- 128

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           N  + PE             +  D    + +   + K   IVK++  +      I R D 
Sbjct: 129 NGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADY 188

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E +    +  P+  +  +       +     Y+  L    ++  +  
Sbjct: 189 EGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFV 248

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLK-------SDGSYTYFAAD--LAYFKCKYERG- 348
                ++  Q   +S +    + R L+         D    Y   D  L Y     E   
Sbjct: 249 QPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTEDNK 308

Query: 349 ---------FDN--MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                    F     ++++G D    H+ Y     A+  +   +  ++         L +
Sbjct: 309 QQNLETAVSFGWPASLHLIGKDILRFHAVY---WPAMLMSAGLELPKMVFGHGF---LTK 362

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---KNSELLDFD-FCKVKEQSKEN 449
           DGM  KM K  G+ +    +V + G D+VR+  L      N      D F K+      N
Sbjct: 363 DGM--KMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLAN 420

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            +  +     R   + ++  +    +D  +    V  +++     E  
Sbjct: 421 TIGNLL---NRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKA 465


>gi|257874768|ref|ZP_05654421.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257808934|gb|EEV37754.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 881

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 63/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 12  NPQEVEAGRYQDWLEHDRFKPSGNKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + ++ L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEEKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ EE                 IR+    + +  D          G    +
Sbjct: 114 --KFVEQVWDWKEE-------------YAGHIREQWAKIGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|225868079|ref|YP_002744027.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701355|emb|CAW98405.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 883

 Score = 58.4 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K     I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQAWLDQDVFKPSGDKKAKPYAIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    L +  D          G    +
Sbjct: 99  -REQGISRYDLGRDKFLDKVWEWK-DEYAATIKEQWGKLGLSLDYARDRFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGF-------------DNMIYVMGSDHS 361
           +         D+A      +  +             + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGQHVVLPIVNKLIPIVGDEHA 264



 Score = 36.8 bits (84), Expect = 9.9,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             G +Y G   P      Q  D+        L   STM   D D             A D
Sbjct: 421 EAGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTD-------------AED 467

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDG 395
                  ++R F     V G D   +      +  ++    +K   NVL+  L+   RD 
Sbjct: 468 -------FKRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTGRKPFSNVLIHGLI---RDQ 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    +++  G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDIIETYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|307299268|ref|ZP_07579069.1| valyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915064|gb|EFN45450.1| valyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 867

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 78/269 (28%), Gaps = 42/269 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS L +   S    G  +     G+   + I     N T P+H+GH    V+ D + 
Sbjct: 7   RYNPSDLEEKWYSCWKEGGFFEPKGSGEPFTIMI--PPPNITAPLHMGHALNLVIQDIII 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+    D           K +  
Sbjct: 65  RFKRMKGYR---------------------------ALWVPGEDHAGIATQNAVEKDLA- 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K  +       E++L    +++ +   + IR+ ++A+    D          G   
Sbjct: 97  ----KKGTNRKELGRERFLETTWNWA-KEYRQRIREQIEAMGCSVDWSRERFTMDEGLSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R     L ++G +Y G                 +    D K   +       D D  +
Sbjct: 152 AVRKAFVMLYKEGLIYRGKYIVNWCPRCSTVLSDEEVEHEDEKGAFYHIKYPIKDSDEYV 211

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +        AD A      +  ++ ++
Sbjct: 212 IIATTRPETMLADTAVAVYPSDDRYEGLV 240


>gi|304438409|ref|ZP_07398349.1| glutamate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368492|gb|EFM22177.1| glutamate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 492

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 94/293 (32%), Gaps = 38/293 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+ G   A       ++     +  R  Y+ DA   I     +  
Sbjct: 11  APSPTGYMHIGNLRTALYGYLFARANDGTFILRIE--DTDRSRYVADAVDFIRRTLDAA- 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++     G   G Y++     +  +Y+ +L+                 A  
Sbjct: 68  -----GIIPDEGPDEIGGDFGPYVQSERMAIYKQYAEQLVAEG-------------HAYR 109

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                  +A   +         + R       + +     +G  Y      P    T   
Sbjct: 110 CFCHQTEEAEPAEDGKSYGG--YPRTCRDLTPEEVQAHLDRGDAYVIRQKMPLVGETTFY 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+    +   +T +    D+ LLK DG  TY   + A     +     ++I   G++   
Sbjct: 168 DVLHGSVTIPNTEL---EDQVLLKRDGMPTY---NFANVIDDHLMKVSHIIR--GAEFIT 219

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
              +   +  A   +      L   + R    G   K+SKR G   +   +V 
Sbjct: 220 STPKHVLLYEAFGWEPPVFVHLAPVMGRDDATGKTSKLSKRHG-ATSFDDLVK 271


>gi|323465874|gb|ADX69561.1| Glutamyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 499

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|313676607|ref|YP_004054603.1| glutamyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943305|gb|ADR22495.1| glutamyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 514

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 57/285 (20%), Positives = 107/285 (37%), Gaps = 30/285 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP+H+G  R A+     A       ++     +  R  Y+N A   I+    ++ 
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAKKAGGQFILRIEDTDQNR--YVNGAEDYIH---QTLK 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W     +  ++S   +    G Y +   KE   KY+ +LL+            +     +
Sbjct: 65  WL---GITPDESPWNDQGEVGPYRQSERKEHYAKYAQQLLDDD-----KAYYAFDTSEEL 116

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +R+ LKA  +    + +       +   + ++ ++     G  Y   L  P+ +  + 
Sbjct: 117 DEMRERLKAARVDTPQYNAITRMQMKNSLTLSKEEVEAKLDAGEPYVIRLKVPRKEEVRL 176

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  ++  ST +    D+ L+KSDG  TY    LA     +  G  ++I   G +  
Sbjct: 177 NDKVRGWVMVHSTQID---DKILMKSDGMPTYH---LANVIDDHLMGITHVIR--GEEWL 228

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                   +      +          L+ L  DG   K+SKR  +
Sbjct: 229 PSAPLHVLLYQFFGWEDTMPEFAHLPLL-LKPDGNG-KLSKRDAE 271


>gi|161506925|ref|YP_001576879.1| glutamyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260102406|ref|ZP_05752643.1| glutamate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|172048173|sp|A8YTD2|SYE_LACH4 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|160347914|gb|ABX26588.1| Glutamyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260083774|gb|EEW67894.1| glutamate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328462972|gb|EGF34780.1| glutamyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 499

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 108/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|328478450|gb|EGF48181.1| glutamyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 366

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 108/299 (36%), Gaps = 38/299 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q++ L     
Sbjct: 11  APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTKR-NVADGEKSQMDNL----H 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +   K++ DK   +L++          K ++ ++  
Sbjct: 66  WLGIDWDEGPD----KGGDFGPYRQSERKDIYDKLIKQLVD----------KGFAYESYR 111

Query: 243 --KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + ++ D +A   +H++   E ++     +   D I     +G         P  KT +
Sbjct: 112 TEEELKADREAQKARHEMPHYEYEYEGMSEAEKADAIAAAKAKGLQPVIRFHIPTDKTYE 171

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  +G D    + K DG  TY   + A     +     +++   G DH
Sbjct: 172 WNDIVKGKISIDANTLGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISHVLR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  A+  A   +      +   +  +       K+SKR    +       E+G 
Sbjct: 225 IANTPKQLAIYDAFGWEPP----IFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGY 279


>gi|319947518|ref|ZP_08021750.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746458|gb|EFV98719.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 883

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGREKFLEKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKHVVLPIANKLIPIVGDEHA 264



 Score = 37.2 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|255657488|ref|ZP_05402897.1| methionyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449084|ref|ZP_06890874.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879907|ref|ZP_06903880.1| methionine--tRNA ligase [Clostridium difficile NAP07]
 gi|296262177|gb|EFH08982.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429196|gb|EFH15070.1| methionine--tRNA ligase [Clostridium difficile NAP07]
          Length = 645

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 137/433 (31%), Gaps = 82/433 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  DT+A    F GY+V      ++ G +I   A+            
Sbjct: 15  PSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI------------ 62

Query: 192 NDSDLPEGYYPGVYLKHVG--KELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRD 247
            +  + E  Y    +K +       D    + +   E++   I++     +     I + 
Sbjct: 63  -EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G+  P     D       V E       SK       DR
Sbjct: 122 EYEGRYCTPCESFWTESQLLEGNKCP-----DCGRETYLVKEESYFFRLSKY-----EDR 171

Query: 307 KQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM---- 356
            + LF+         R         D      +     F    +  FD  ++IYV     
Sbjct: 172 LKELFKDDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDAL 231

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP-------- 397
                       +D   + K   A    V ++  + + ++   + +              
Sbjct: 232 CNYITALGYMTDND-EEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHG 290

Query: 398 ------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                  KMSK  G+ +    +++  G D++++ +L        +F F +    +  N V
Sbjct: 291 WILFADDKMSKSKGNVVYPEPIIERYGIDTLKYFLLR-------EFAFGQDGSYTHRNFV 343

Query: 452 FYVQYA-YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL---------IVH 501
             + Y       ++  +   +    +  + P   +  + + D  E  +         +  
Sbjct: 344 TRINYDLANDLGNLISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDK 403

Query: 502 LAEYPRVIENATI 514
           + ++   +E+   
Sbjct: 404 M-QFHEALESVWK 415


>gi|313895257|ref|ZP_07828814.1| glutamate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976152|gb|EFR41610.1| glutamate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 492

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 98/297 (32%), Gaps = 44/297 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+     A       ++     +  R  Y+ DA   I     +  
Sbjct: 10  APSPTGYMHIGNLRTALYAYLFARANDGTFILRIE--DTDRSRYVADAVDFIRRTLDAA- 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++     G   G Y++    E+  KY+ +L+             ++ +   
Sbjct: 67  -----GIVPDEGPDDIGGDYGPYVQSERMEIYKKYAEQLVATG----------HAYRCFC 111

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               +   A   +     S   + R       + I+    +G  Y      P +  T   
Sbjct: 112 SHTEEVPPAEGEK-----SFGGYPRTCRDLSPEEIEARLARGEAYVIRQKMPLTGETTFY 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+    +   +T +    D+ LLKSDG  TY   + A           ++I       + 
Sbjct: 167 DVLHGNVTIPNTEL---EDQVLLKSDGMPTY---NFANVIDDRLMKVSHII-----RGTE 215

Query: 363 YVKRLEAVA---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           ++           A   +      L   + R    G   K+SKR G   +   +V+ 
Sbjct: 216 FITSTPKHVLLYEAFGWEPPVFVHLAPVMGRDEETGKTSKLSKRHG-ATSFNDLVEA 271


>gi|310644228|ref|YP_003948987.1| glutamyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309249179|gb|ADO58746.1| Glutamyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 486

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 124/391 (31%), Gaps = 49/391 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I         +Y + 
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---NQGGKFIIRIEDTDVKRNIEG-GEESQLKYLKW 65

Query: 189 LYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           L  + D  +  G   G Y +    ++   Y  +LL            D  +        +
Sbjct: 66  LGMDWDESIDVGGEFGPYRQTERLDIYKTYWQDLL------------DRGLAYRCYCTEE 113

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L+    +         +         +       +G V       P+ +     D+ + 
Sbjct: 114 ELEREREEQMERGETPRYSGKHRDLTEEQCQAFEAEGRVPSIRFRVPEDREYTFDDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           Q+ F S   GD     ++K DG  TY   + A     Y     +++   G DH     R 
Sbjct: 174 QITFNSKESGDF---VIVKKDGIPTY---NFAVAVDDYLMKISHVLR--GEDHVSNTPRQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--DSV-RF 424
             +  A+  +  +   +      L       K+SKR    I      D++G   +++  F
Sbjct: 226 LMIFEALGWEPPRFGHM-----TLIVGEDHKKLSKRNESIIQFMEQYDKLGYLPEAIFNF 280

Query: 425 MMLWRKN----SELLD-------FDFCKVKEQ---SKENPVFYVQYAYARCRSIFRQAKD 470
           + L   +     E+ D       FD  ++ +       N + Y+   Y +     R A  
Sbjct: 281 IALLGWSPEGEEEIYDREQLISIFDPNRLSKSPAVFDTNKLAYLNNHYIKKADPERIASM 340

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
             P L       N +  E +       L+  
Sbjct: 341 AIPHLQAAGLLPNELSTEQQ--DWAKALVRL 369


>gi|299822786|ref|ZP_07054672.1| valine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816315|gb|EFI83553.1| valine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 884

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 59/203 (29%), Gaps = 33/203 (16%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                    +   +       ++     N TG +H+GH     + D +A +    G++  
Sbjct: 25  YEWWKEQNFFQAKITKDKQAFSVVIPPPNVTGKLHIGHAWDVTLQDIIARIKRMQGFD-- 82

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
             Y        ++   ++   + ++ L             G+    +G+E   K+  ++ 
Sbjct: 83  TLYLPG-----MDHAGIATQAKVEEKLREE----------GISRYDLGRE---KFIDQVW 124

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           ++ EE                 IR     L +  D          G    ++ +   L  
Sbjct: 125 DWKEE-------------YAGEIRKQWGKLGLSLDYSRERFTLDEGLSDAVKKVFVTLYE 171

Query: 283 QGYVYEGILPPPKSKTTQKCDMD 305
           +  +Y G          +    D
Sbjct: 172 KELIYRGEYIINWDPVAKTALSD 194



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ +    V+D+ G+DS+R+M+       + L F F K++      
Sbjct: 520 LVRDAEGRKMSKSLGNGVDPIEVIDKYGADSLRYMLSTGTSPGQDLKFSFEKIEA----- 574

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  ++     I       F  ++ D      I      + S+  ++  L E    +
Sbjct: 575 -------SWNFINKI--WNASRFALMNMDGMTFEEIDLSHVKEVSDKWILTRLNETIEAV 625

Query: 510 ENATIAQE 517
                  E
Sbjct: 626 TKLAERYE 633


>gi|154503249|ref|ZP_02040309.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149]
 gi|153796243|gb|EDN78663.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149]
          Length = 882

 Score = 58.4 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 51/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYDPKAIEEKLYERWCENKYFHAEVDRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G        
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGREG-------- 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                       F E  W         +     I + LK L I  D          G   
Sbjct: 113 ------------FLERTWQ------WKEEYAGTIENQLKKLGISCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEKGYIYKG 172


>gi|291521943|emb|CBK80236.1| valyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 883

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 56/198 (28%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + +    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 6   TYNPAAIEEKIYDRWLQKKYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 65

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  +++   +    L        E    G        
Sbjct: 66  RCKRMQGYEAL-------WQPGTDHASIATEVKIINKLKEEGISKEELGREG--FLEKAW 116

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y                         +II+  LK L    D          G   
Sbjct: 117 EWKEEYGG-----------------------RIIKQ-LKKLGSSADWDRERFTMDEGCSK 152

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 153 AVEEVFCKLHEKGYIYKG 170



 Score = 38.4 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 70/204 (34%), Gaps = 25/204 (12%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           KA  + +L     L RD    KMSK  G+ I    V+D+ G+D++R  ++        D 
Sbjct: 505 KAPFHTVLIHG--LVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGN-DM 561

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            F   + +S  N    V  A       F QA +    +D             +   ++  
Sbjct: 562 RFYWERVESSRNFANKVWNASRFMLMNFEQAAEKGISIDGVSLA--------DLTQADKW 613

Query: 498 LIVHLAEYPRVIENATIAQEP----YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           ++  +    + +       E      K+  ++++    F   +           +  +  
Sbjct: 614 ILSKMNRLTKDVTENIDKYELGIAVSKIYDFIWE---EFCDWY----IEMVKPRLYNDED 666

Query: 554 KLTMMRLQLVHAVASIINSGLNII 577
           K     L     + +++ + L ++
Sbjct: 667 KTKAAALW---TLKTVLINALKLL 687


>gi|260752469|ref|YP_003225362.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551832|gb|ACV74778.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 521

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 70/425 (16%), Positives = 128/425 (30%), Gaps = 66/425 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   ++  D LA     +G +V  +   ++ G ++   A +   R  + +  
Sbjct: 14  PNGKPHIGHAYESIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN---RDIEPIAL 70

Query: 192 NDS-----DLPEGYYPGVYLKHVGKELADKYSSE---LLNFPE---------EKWLPIVK 234
            D         +  Y   Y + +    A+ Y +         +         E W  I  
Sbjct: 71  ADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRYEGWYSIRD 130

Query: 235 D--YSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +  Y  + ++   + + L       +  + E  F R          D L      +   +
Sbjct: 131 EAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQ-----DKLLAYYEAHPDFI 185

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-------AYFKCK 344
            P   +      +         +    D   P+  S G   Y   D        A +   
Sbjct: 186 QPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGYPDN 245

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMP 397
            ER FD      I+V+G D    + R  AV   A  ++   A    +      L R    
Sbjct: 246 KER-FDRYWPADIHVIGKD----IIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRG--- 297

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +    +    G D +R+ +L                    ++  +  +  
Sbjct: 298 EKMSKSVGNVVDPIDMAKLYGVDQIRYFLLRE--------------VTFGQDGSYSHEAI 343

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515
             R  +               +  +N     S  DT   +  L+  +A  P  +  A   
Sbjct: 344 VNRINADLANDFGNLAQRSLSIIAKNGAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNN 403

Query: 516 QEPYK 520
             P +
Sbjct: 404 VAPNQ 408


>gi|228918989|ref|ZP_04082369.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840638|gb|EEM85899.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 660

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVSGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|238019164|ref|ZP_04599590.1| hypothetical protein VEIDISOL_01027 [Veillonella dispar ATCC 17748]
 gi|237863863|gb|EEP65153.1| hypothetical protein VEIDISOL_01027 [Veillonella dispar ATCC 17748]
          Length = 486

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 98/285 (34%), Gaps = 44/285 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G  V R     D          ++    Q  
Sbjct: 6   APSPTGPFHIGGARSALFNWLLAR--KEKGTFVLRIE-DTDLARSTRESEENIKASLQWL 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D  +  G   G Y +    +L  + +  LL+  +                    ++
Sbjct: 63  GMNWDEGIDVGGDNGPYRQTERLDLYKEVTQRLLDEGKA------------YECYCTPEE 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQGYVYEGI-----LPPPKSKTTQ 300
           L A+         ++   RG+          +D   +  Y+ EG      L  P +KT  
Sbjct: 111 LDAVR--------QEQMDRGETPKYNGHCQHLDEETKAKYIAEGRKPTIRLRVPLNKTYA 162

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R  + F S  VGD     ++KSDG   Y   + A     +  G  ++I     +H
Sbjct: 163 FDDMVRGHVSFESNGVGDF---VIVKSDGIPVY---NFAVVMDDHMMGITHVIR--AEEH 214

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A+  +  +        + L       KMSKR G
Sbjct: 215 LSNTPRQMAIYEALGWEVPKFGH-----ISLILGKDYKKMSKRHG 254


>gi|307243786|ref|ZP_07525918.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492840|gb|EFM64861.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 646

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 113/337 (33%), Gaps = 62/337 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    +  D +A    F GY+V      ++ G +I   A        + L  
Sbjct: 16  PSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQKKAHEAGKSEIEFLDE 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
             +++ +             E  +  + + +   EE+    ++    +   K  I +   
Sbjct: 76  QIAEIKKL-----------WEKLEISNDDFIRTTEERHEKAIQKIFTKLYEKGEIYKGSY 124

Query: 250 KA-LNIQHDIFISEDDFHRGD--PSPIRDIIDNLARQGYV----YEGILPPPKSKTTQKC 302
           +    +  + F +E     G+  P   R+         +     Y+  L      T    
Sbjct: 125 EGHYCVPCESFWTESQMLEGNKCPDCGRETKVVKEESYFFRLSKYQDRLMDLFQNTDFVM 184

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM---- 356
              RK  + ++ +     D  + ++             F    +  FD  ++IYV     
Sbjct: 185 PESRKNEMIKNFLEPGLEDLSVTRTS------------FDWGIKVPFDEKHIIYVWVDAL 232

Query: 357 ----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------------ 394
                     G D + Y K   A    V+++  + + ++   + +  D            
Sbjct: 233 CNYITALGYEGDDDTNYKKFWPADVHLVAKEIVRFHTIIWPALLMALDIPVPKRVFGHGW 292

Query: 395 --GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                 KMSK  G+ +    +VD  G D++++ +L  
Sbjct: 293 ILFADDKMSKSKGNIVYPGQMVDRYGVDALKYFLLRE 329


>gi|308071000|ref|YP_003872605.1| glutamyl-tRNA synthetase [Paenibacillus polymyxa E681]
 gi|305860279|gb|ADM72067.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 486

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 124/392 (31%), Gaps = 51/392 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I         +Y + 
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---NQGGKFIIRIEDTDVKRNIEG-GEESQLKYLKW 65

Query: 189 LYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMMKIIR 246
           L  + D  +  G   G Y +    ++   Y  +LL+           ++   +   +  R
Sbjct: 66  LGMDWDESVDVGGEFGPYRQTERLDIYKTYWQDLLDRGLAYRCYCTEEELEREREEQTAR 125

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            +    + +H     E                    +G V       P+ +     D+ +
Sbjct: 126 GETPRYSGKHRDLTEEQ-------------CQAFEAEGRVPSIRFRVPEDREYTFDDIVK 172

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            Q+ F S   GD     ++K DG  TY   + A     Y     +++   G DH     R
Sbjct: 173 GQITFNSKESGDF---VIVKKDGIPTY---NFAVAVDDYLMKISHVLR--GEDHVSNTPR 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--DSV-R 423
              +  A+  +  +   +      L       K+SKR    I      D++G   +++  
Sbjct: 225 QLMIFEALGWEPPRFGHM-----TLIVGEDHKKLSKRNESIIQFMEQYDKLGYLPEAIFN 279

Query: 424 FMMLWRKN----SELLD-------FDFCKVKEQ---SKENPVFYVQYAYARCRSIFRQAK 469
           F+ L   +     E+ D       FD  ++ +       N + Y+   Y +     R A 
Sbjct: 280 FIALLGWSPEGEEEIYDREQLISIFDPNRLSKSPAVFDTNKLAYLNNHYIKKADPERIAS 339

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
              P L         +  E         L+  
Sbjct: 340 MAIPHLQAAGLLPTELSAEQL--DWAKALVRL 369


>gi|307704026|ref|ZP_07640958.1| valyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622417|gb|EFO01422.1| valyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 883

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|293364162|ref|ZP_06610889.1| valine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702483|ref|ZP_07639438.1| valyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317340|gb|EFE57766.1| valine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623977|gb|EFO02959.1| valyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 883

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|332362845|gb|EGJ40638.1| valine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 881

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 263



 Score = 37.2 bits (85), Expect = 8.5,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 420 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 480 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 515

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 516 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 563


>gi|260102647|ref|ZP_05752884.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083552|gb|EEW67672.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 879

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGDKKVHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYIPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDHHQMGREAFVKQVWDWK-DEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L ++G +Y G          Q    D
Sbjct: 156 KKVFVQLYKEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|229552876|ref|ZP_04441601.1| glutamate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229313745|gb|EEN79718.1| glutamate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 502

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 108/299 (36%), Gaps = 38/299 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q++ L     
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTKR-NVADGEKSQMDNL----H 70

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +   K++ DK   +L++          K ++ ++  
Sbjct: 71  WLGIDWDEGPD----KGGDFGPYRQSERKDIYDKLIKQLVD----------KGFAYESYR 116

Query: 243 --KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + ++ D +A   +H++   E ++     +   D I     +G         P  KT +
Sbjct: 117 TEEELKADREAQKARHEMPHYEYEYEGMSEAEKADAIAAAKAKGLQPVIRFHIPTDKTYE 176

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  +G D    + K DG  TY   + A     +     +++   G DH
Sbjct: 177 WNDIVKGKISIDANTLGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISHVLR--GDDH 229

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  A+  A   +      +   +  +       K+SKR    +       E+G 
Sbjct: 230 IANTPKQLAIYDAFGWEPP----IFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGY 284


>gi|229087021|ref|ZP_04219175.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696284|gb|EEL49115.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 881

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 54/203 (26%), Gaps = 33/203 (16%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               + G  +      +     I     N TG +H+GH     + D L       GY+V 
Sbjct: 22  YKWWLEGQYFEAKGDAEKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVL 81

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
                      ++   ++   + +  L                          +      
Sbjct: 82  -------WLPGMDHAGIATQAKVEGKL-------------------------REEGISRY 109

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +   EK+L    ++  +     IR+    + +  D          G    +  +   L  
Sbjct: 110 DLGREKFLEKAWEWK-EEYASHIREQWGKVGLGLDYTRERFTLDEGLSDAVNKVFVQLYE 168

Query: 283 QGYVYEGILPPPKSKTTQKCDMD 305
           +G +Y G         T+    D
Sbjct: 169 KGLIYRGEYIINWDPATRTALSD 191



 Score = 37.6 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 62/177 (35%), Gaps = 29/177 (16%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++RF +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
                I       F  ++ D      I    E   ++  ++  L      IE+ T  
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRN 626


>gi|324991274|gb|EGC23207.1| valine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 883

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|199598524|ref|ZP_03211941.1| Glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|258509327|ref|YP_003172078.1| glutamyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|258540514|ref|YP_003175013.1| glutamyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|199590566|gb|EDY98655.1| Glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|257149254|emb|CAR88227.1| Glutamyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257152190|emb|CAR91162.1| Glutamyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|259650608|dbj|BAI42770.1| glutamyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 497

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 108/299 (36%), Gaps = 38/299 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q++ L     
Sbjct: 11  APSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDTDTKR-NVADGEKSQMDNL----H 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +   K++ DK   +L++          K ++ ++  
Sbjct: 66  WLGIDWDEGPD----KGGDFGPYRQSERKDIYDKLIKQLVD----------KGFAYESYR 111

Query: 243 --KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + ++ D +A   +H++   E ++     +   D I     +G         P  KT +
Sbjct: 112 TEEELKADREAQKARHEMPHYEYEYEGMSEAEKADAIAAAKAKGLQPVIRFHIPTDKTYE 171

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  +G D    + K DG  TY   + A     +     +++   G DH
Sbjct: 172 WNDIVKGKISIDANTLGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISHVLR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  A+  A   +      +   +  +       K+SKR    +       E+G 
Sbjct: 225 IANTPKQLAIYDAFGWEPP----IFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGY 279


>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200211|sp|A4IM25|SYI_GEOTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 924

 Score = 58.0 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 77/389 (19%), Positives = 130/389 (33%), Gaps = 93/389 (23%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   +LL+   E KW+P   +  +  M++  R D      +A  +   +F  E     G
Sbjct: 415 DKIRDQLLDAIKETKWVPEWGEIRIHNMVRD-RGDWCISRQRAWGVPIPVFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         + D   + F S
Sbjct: 470 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGLFTKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++ D        DL       ER  D  +Y+ GSD   G+     + A 
Sbjct: 530 ---GSSHQAVLVERD--------DL-------ERPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V++++G+D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ S+          Y + R+ FR       D D +     V  +  E D
Sbjct: 627 ADVRISDNILKQVSE---------VYRKIRNTFRFMLGNLFDFDPNQNAVPV-GELGELD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHWSHGRE 541
                    LA+  ++I     A +        YD A+V+H             +     
Sbjct: 677 RY------MLAKLNKLIAKVKKAYD-------SYDFAAVYHEMNHFCTVELSAFY----- 718

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASII 570
               + +          R     AV +++
Sbjct: 719 LDMAKDILYIEAADCRAR----RAVQTVL 743


>gi|228956480|ref|ZP_04118277.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039943|ref|ZP_04189708.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229142844|ref|ZP_04271287.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148448|ref|ZP_04276705.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500870|ref|YP_003662570.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228634990|gb|EEK91562.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640607|gb|EEK96994.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228727402|gb|EEL78594.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803170|gb|EEM49991.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296321922|gb|ADH04850.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 660

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|228912778|ref|ZP_04076426.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846838|gb|EEM91842.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 660

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 119/349 (34%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V + ++      +    ++ R++  F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPI----MVGDKVVGGKSPDSGHDVELVREESYF 173

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
               +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 174 --FRMGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|194017985|ref|ZP_03056592.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010322|gb|EDW19897.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 666

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 107/351 (30%), Gaps = 79/351 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V            +         +  Q    
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLQGYDV------------MYLTGTDEHGQKIQQKAE 64

Query: 192 NDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
             +  P  Y  P V       +  D  + + +   E++   I++         + +  L 
Sbjct: 65  EQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTKIIEQ--------VFQKLLD 116

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             +I  D +                ++D     +G V                 +  +  
Sbjct: 117 QGDIYLDQYEGWYSIPDETFYTETQLVDVERNEKGEV---TGGKSPDSGHPVELIKEESY 173

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF--- 349
            FR +      DR L   + + T+                    DLA  +  ++ G    
Sbjct: 174 FFRMSKY---ADRLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVP 230

Query: 350 ---DNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
               ++IYV              G+D    Y K   A    V ++  + + +   ++ + 
Sbjct: 231 NNPKHVIYVWIDALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMA 290

Query: 393 RD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 291 LDLPLPKQIFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 341


>gi|194017561|ref|ZP_03056172.1| glutamyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010833|gb|EDW20404.1| glutamyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 483

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 98/292 (33%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    +     S     Q  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---SQGGKFIIRIEDTDQKRNVEGGEESQLRHLQWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  + +    G Y +    ++  KY  ELL      K     ++   +   +I R 
Sbjct: 67  GIDWDESIDKDGGYGPYRQSERNDIYKKYYDELLEKDLAYKCYCTAEELEEEREAQIARS 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +      E++             D L  +G         PK +  +  DM + 
Sbjct: 127 EMPRYSGKCSHLSKEEE-------------DKLIAEGREPSIRFRVPKGEIIKFDDMVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F +  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 DISFETDGIGDF---VIVKKDGTPTY---NFAVAVDDYLMKMTHILR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A         V L   + L  +    K+SKR    I        +G 
Sbjct: 226 IMIFNAFGWD-----VPLFGHMTLIVNENRKKLSKRDESIIQFIEQYKNLGY 272


>gi|206972593|ref|ZP_03233536.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229176639|ref|ZP_04304044.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188324|ref|ZP_04315373.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|206732495|gb|EDZ49674.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228595123|gb|EEK52893.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606806|gb|EEK64222.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 660

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|228937341|ref|ZP_04099988.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970227|ref|ZP_04130887.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976797|ref|ZP_04137210.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782893|gb|EEM31058.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789462|gb|EEM37381.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822299|gb|EEM68280.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326937830|gb|AEA13726.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 660

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|218235634|ref|YP_002364888.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218163591|gb|ACK63583.1| methionine--tRNA ligase [Bacillus cereus B4264]
          Length = 660

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|319952746|ref|YP_004164013.1| isoleucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421406|gb|ADV48515.1| Isoleucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 1134

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 35/185 (18%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+       ++
Sbjct: 642 GVDQTRGWFYTLHAIATMVFDSVAYKNVVSNGLV---LDKEGKKMSKRLGNAADPFETMN 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D+ R+ M+   N  + L FD   + E  ++          F+  Y          +
Sbjct: 699 EHGADATRWYMISNANPWDNLKFDIEGIAEVKRKFFGTLYNTYSFFALYTNIDNFQYKEK 758

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYK----LA 522
                        P N  P+  ++  SEL  LI         ++ A    EP +    ++
Sbjct: 759 -----------EIPLNERPEIDQWVLSELHTLIK-------TVDEAYADYEPTRATRAIS 800

Query: 523 FYLYD 527
            Y+ +
Sbjct: 801 EYVQE 805


>gi|332362217|gb|EGJ40017.1| valine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 883

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRVLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|322388625|ref|ZP_08062225.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140545|gb|EFX36050.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 883

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLEKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264



 Score = 37.2 bits (85), Expect = 8.5,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|167745430|ref|ZP_02417557.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662]
 gi|167655151|gb|EDR99280.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662]
          Length = 879

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS +   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYNPSEIEDRLYQKWLDNKYFHAEVDHSKKPFTIVIPPPNITGKLHMGHALDETLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +  +AL     +  +             
Sbjct: 68  RFKKMQGYNTL-------WQPGTDHASIATEVKIIEALKEEGIEKEDLGR--EKFLERAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y   +++                         LK L    D          G   
Sbjct: 119 EWKEEYGGTIVSQ------------------------LKKLGSACDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEKGYIYKG 172


>gi|307710391|ref|ZP_07646831.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618868|gb|EFN98004.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 883

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGQNVILPIANKLIPIVGDEHA 264


>gi|229067803|ref|ZP_04201121.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715287|gb|EEL67145.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 660

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|260589301|ref|ZP_05855214.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540382|gb|EEX20951.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 881

 Score = 58.0 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 70/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L   +    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKGLEDRIYQKWLDNKYFHAEVNRDKKPFTIVMPPPNVTGQLHMGHALDETMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +  + L     D  E      +LKH   
Sbjct: 68  RFKRMQGYEAL-------WQPGTDHAAIATEVKVIEKLKEQGIDKNEIG-REEFLKH-AW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y  +++N                         LK L    D          G   
Sbjct: 119 EWKEEYGGKIINQ------------------------LKKLGASADWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D +            ++ P+   +G +
Sbjct: 155 AVQEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPVAGEEGQF 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 25/202 (12%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K   + +L     L RD    KMSK  G+ I    V+D+ G+D++R  ++        D 
Sbjct: 507 KTPFHHVLIHG--LVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGN-DM 563

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            F   + ++  N    V  A         +A DI  ++D            S+ +T   +
Sbjct: 564 RFYWERIEASRNFANKVWNASRFIMMNLEKA-DIPKNIDLQTLTGADKWILSKVNTLAKE 622

Query: 498 LIVHLAEYPR--VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           +  +L +Y     ++             ++++    F   +    E  + R     +   
Sbjct: 623 VTENLDKYELGIAVQKVYD---------FIWE---EFCDWY---IEMVKPRLYNDEDTTK 667

Query: 556 TMMRLQLVHAVASIINSGLNII 577
                  +  + +++++ L ++
Sbjct: 668 AAA----LWTLKTVLSNALKLL 685


>gi|313889089|ref|ZP_07822745.1| glutamate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312844829|gb|EFR32234.1| glutamate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 491

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 104/291 (35%), Gaps = 45/291 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  R  Y+  A   I  L  
Sbjct: 9   APSPTGYLHIGGLRTALYNYLFAKKNGGKFVLRI-----EDTDRTRYVEGA---IENLIE 60

Query: 180 SVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           S+ W    + + +   D  L E    G Y++    ++  KY  +L+      +       
Sbjct: 61  SLEWAGITHDEGVVVKDGKLAEVGDCGPYIQSERLDIYKKYVDKLIE-DGHAYYCFCSKD 119

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +  + +  R                D   RG P  + +    +A  G  Y   L  PK+
Sbjct: 120 RLDHLREEQR--------IKGKVPKYDGLCRGIP--LEEAKKRIAA-GEDYVVRLKLPKN 168

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K     D  R ++   +  +    D+ L+KSDG  TY    +A     +  G  ++  V 
Sbjct: 169 KDITFNDAVRGKVTINTDEID---DQVLMKSDGFPTYH---MAVIVDDHLMGITHI--VR 220

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           G +      +   +   +  +  +  V L  ++   R     K+SKR GD 
Sbjct: 221 GEEWLPSTPKHVYLYECLGWEAPEF-VHLPTVLNKDR----KKLSKRQGDV 266


>gi|30018309|ref|NP_829940.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229125556|ref|ZP_04254589.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|38258299|sp|Q81JA8|SYM1_BACCR RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|29893849|gb|AAP07141.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228657873|gb|EEL13678.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 660

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMNISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|322376122|ref|ZP_08050631.1| valine--tRNA ligase [Streptococcus sp. C300]
 gi|321278890|gb|EFX55934.1| valine--tRNA ligase [Streptococcus sp. C300]
          Length = 883

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264



 Score = 38.4 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   D+D    K     S     
Sbjct: 421 AEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDMDSADFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|239630175|ref|ZP_04673206.1| hypothetical protein LBPG_02237 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239527787|gb|EEQ66788.1| hypothetical protein LBPG_02237 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 497

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q+  L     
Sbjct: 11  APSPTGHLHIGNARTALFNYLFARHNNGTLVLRIEDTDTKR-NVADGEKSQMENL----H 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +   K++ DK   +L++          K ++ ++  
Sbjct: 66  WLGIDWDEGPD----KGGDFGPYRQSERKDIYDKLIKQLVD----------KGFAYESYR 111

Query: 243 --KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + ++ D +A   +H++   E ++     +   D I     +G         P  KT +
Sbjct: 112 TEEELKADREAQKARHEMPHYEYEYEGMTDAEKADAIAAAKAKGLEPVIRFHIPMDKTYE 171

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  +G D    + K DG  TY   + A     +     +++   G DH
Sbjct: 172 WDDIVKGKISIDANTLGGDF--VIQKRDGMPTY---NFAVVVDDHMMQISHVLR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  A+  A   +      +   +  +       K+SKR    +       E+G 
Sbjct: 225 IANTPKQLAIYDAFGWEPP----IFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGY 279


>gi|148642328|ref|YP_001272841.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
           35061]
 gi|148551345|gb|ABQ86473.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
           35061]
          Length = 448

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 116/338 (34%), Gaps = 45/338 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++N+           H+GH R  +  DT+     + GY V     I D   +I 
Sbjct: 15  ETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGYTVFYIQNITDVDDKII 74

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                          + ++ +P G         + K+   +Y  ++            + 
Sbjct: 75  K-------------RSKETGIPAG--------DIAKKFEKRYIEDMAKLNVTGVNLFAR- 112

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +   M +II D ++ L  +   + +ED  + G        IDN    G +    +   +
Sbjct: 113 -ATDHMGEII-DQIQRLIDKGFAYETEDGVYFG--------IDNFKEFGKLSNRNIEELE 162

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS---DGSYTYFAADLAYFKCKYERGFDNM 352
           S         +  + F      ++VD P+  S   +G   +   D A  +  +   +D  
Sbjct: 163 SHREIAKTTKKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYD-- 220

Query: 353 IYVMGSDHSGYVKRLEA---VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             V G          EA      AVS K   +N  L      + +    KMSK   +FIT
Sbjct: 221 --VHGGGLDLIFPHHEAEITQMEAVSGKSPMVNYWLHTG---FLNVSGEKMSKSLNNFIT 275

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +R ++ E  +D  RF +L       +DF    + +  K
Sbjct: 276 IRELLKEYDADVFRFFVLSTHYRSPIDFSKESLHQSEK 313


>gi|331082707|ref|ZP_08331830.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400326|gb|EGG79968.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 881

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 70/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L   +    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKGLEDRIYQKWLDNKYFHAEVNRDKKPFTIVMPPPNVTGQLHMGHALDETMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +  + L     D  E      +LKH   
Sbjct: 68  RFKRMQGYEAL-------WQPGTDHAAIATEVKVIEKLKEQGIDKNEIG-REEFLKH-AW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y  +++N                         LK L    D          G   
Sbjct: 119 EWKEEYGGKIINQ------------------------LKKLGASADWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D +            ++ P+   +G +
Sbjct: 155 AVQEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPVAGEEGQF 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219



 Score = 38.0 bits (87), Expect = 4.4,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 33/206 (16%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K   + +L     L RD    KMSK  G+ I    V+D+ G+D++R  ++        D 
Sbjct: 507 KTPFHHVLIHG--LVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGN-DM 563

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            F   + ++  N    V  A         +A DI  ++D            S+ +T    
Sbjct: 564 RFYWERIEASRNFANKVWNASRFIMMNLEKA-DIPKNIDLQTLTGADKWILSKVNT---- 618

Query: 498 LIVH----LAEYPR--VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           L       L +Y     ++             ++++    F   +    E  + R     
Sbjct: 619 LAKEATENLDKYELGIAVQKVYD---------FIWE---EFCDWY---IEMVKPRLYNDE 663

Query: 552 NRKLTMMRLQLVHAVASIINSGLNII 577
           +          +  + +++++ L ++
Sbjct: 664 DTTKAAA----LWTLKTVLSNALKLL 685


>gi|116495765|ref|YP_807499.1| glutamyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191639250|ref|YP_001988416.1| glutamyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|301067321|ref|YP_003789344.1| glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus casei str.
           Zhang]
 gi|122262833|sp|Q035R5|SYE_LACC3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|238693009|sp|B3WA39|SYE_LACCB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116105915|gb|ABJ71057.1| glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase
           [Lactobacillus casei ATCC 334]
 gi|190713552|emb|CAQ67558.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Lactobacillus casei BL23]
 gi|300439728|gb|ADK19494.1| Glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus casei str.
           Zhang]
 gi|327383331|gb|AEA54807.1| Glutamyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386514|gb|AEA57988.1| Glutamyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 497

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q+  L     
Sbjct: 11  APSPTGHLHIGNARTALFNYLFARHNNGTLVLRIEDTDTKR-NVADGEKSQMENL----H 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +   K++ DK   +L++          K ++ ++  
Sbjct: 66  WLGIDWDEGPD----KGGDFGPYRQSERKDIYDKLIKQLVD----------KGFAYESYR 111

Query: 243 --KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + ++ D +A   +H++   E ++     +   D I     +G         P  KT +
Sbjct: 112 TEEELKADREAQKARHEMPHYEYEYEGMTDAEKADAIAAAKAKGLEPVIRFHIPMDKTYE 171

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  +G D    + K DG  TY   + A     +     +++   G DH
Sbjct: 172 WDDIVKGKISIDANTLGGDF--VIQKRDGMPTY---NFAVVVDDHMMQISHVLR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  A+  A   +      +   +  +       K+SKR    +       E+G 
Sbjct: 225 IANTPKQLAIYDAFGWEPP----IFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGY 279


>gi|295396171|ref|ZP_06806353.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970959|gb|EFG46852.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 527

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 63/425 (14%), Positives = 130/425 (30%), Gaps = 51/425 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  DT+A     +G +V      ++ G ++   A       ++    
Sbjct: 12  PNGAPHIGHAYEYIASDTIARFKRLTGEDVFMLTGTDEHGLKMQQSAQKAGITPRELADK 71

Query: 192 NDSDL--PEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPI--------VKDYSV 238
           N +            Y + +     D Y+          E   + +        V+D + 
Sbjct: 72  NAAGFRALHDALGSSYDRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTYAGWYSVRDEAY 131

Query: 239 QAMMK-IIRDDLKALNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            A  +  +R+D +   I       +  E+ +     +    +++ L          + P 
Sbjct: 132 YAADETEVREDGERYAIATGTPVEWTEEESYFFKLSAYEERLLEWLDSVDDTGRHPVGPD 191

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-- 352
             +      +         +    D   P+  +D    Y   D A        G+ N+  
Sbjct: 192 VRRNEVVSFIKGGLKDLSISRTTFDWGVPVPGNDKHVMYVWVD-ALTNYLTGAGYPNVDS 250

Query: 353 ----------IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                     ++V+G D    H+ Y     A   +   +  +       L          
Sbjct: 251 EEFQQRWPCELHVVGKDILRFHAVY---WPAFLMSAGLELPKRVHAHGFLFN-----KGE 302

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +    +VD  G D++R+ +L R+ S   D  +       ++N     +Y  
Sbjct: 303 KMSKSVGNVVDPYDLVDAFGLDTLRYFLL-REISYGQDGSYSAGAIIGRKNADLANEYGN 361

Query: 459 ARCRS---IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL-----IVHLAEYPRVIE 510
              RS   + +    + P++       +        D    ++     +  L  Y   + 
Sbjct: 362 LVQRSTSMVAKNLSGVVPEVSEADLTDDDRALLERTDGLLERVTAFVDVQELHRYVEALW 421

Query: 511 NATIA 515
                
Sbjct: 422 RVLEE 426


>gi|319777411|ref|YP_004137062.1| glutamyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|238810317|dbj|BAH70107.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038486|gb|ADV34685.1| Glutamyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 463

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 97/284 (34%), Gaps = 45/284 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L         +    +   +Q+  LA 
Sbjct: 9   APSPTGYLHIGGARTALFCYLYAKHFKGDFVFRLED----TDVKRNVADGERSQLENLAW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +    +   + + EL+     K     K Y   
Sbjct: 65  L-------GIVPDESPLKPNKACGKYRQSEKLDRYQEIADELV-----KRGLAYKAYDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++   ++     I           +  +   I +       +   Y   L  PK  T 
Sbjct: 113 EELEAQHEESNKKGIA-------SFRYDRNWLKISEAEKTKREKAKAYSIRLSMPKDVTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R  + F S  +GD     + KSDG  TY   + A     ++    +++   G +
Sbjct: 166 EWEDLVRGNISFNSNDIGDW---VIQKSDGYPTY---NFAVVVDDHDMKISHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           H     +  A+  A++ +           + +  +    K+SKR
Sbjct: 218 HITNTPKQLAIYQALNWEAPYFGH-----LTVITNMEGKKLSKR 256


>gi|295425606|ref|ZP_06818293.1| glutamate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064622|gb|EFG55543.1| glutamate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 499

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 110/309 (35%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTFVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   K++ +KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKDIYNKYIKQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKKAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T +  D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYEWDDIVKGHLSFESDTIGGDF--VIQKRDGMPTYNFAVV------VDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  K  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWKPPKFGH----MTLIINATTGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|257899235|ref|ZP_05678888.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837147|gb|EEV62221.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 881

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YANHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|150024327|ref|YP_001295153.1| isoleucyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149770868|emb|CAL42333.1| Isoleucine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 1133

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 103/291 (35%), Gaps = 37/291 (12%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++  + ++ ++  +  KA+           +F  G+ S     + +L +   V + I   
Sbjct: 533 EEILIGSVEELYNEIEKAIAAGFQSVNPFKNFQVGNMSEENYDLIDLHKN--VVDEITLV 590

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             S    K + D   + F S  +              + Y   +    K K +   D   
Sbjct: 591 SASGKPMKRESDLIDVWFDSGSMPY----------AQWHYPFEN----KDKIDENKDFPA 636

Query: 354 YVM--GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
             +  G D   G+   L A+   V +K A  NV+   LV    D    KMSKR G+    
Sbjct: 637 DFIAEGVDQTRGWFYTLHAIGTLVFDKVAYKNVVSNGLV---LDKNGQKMSKRLGNAADP 693

Query: 411 RHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA 468
              + E G D+ R+ M+   N  + L FD   + E + K     Y  Y++         A
Sbjct: 694 FETLTEYGPDATRWYMISNANPWDNLKFDLEGIAEVRRKFFGTLYNTYSFFALY-----A 748

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEP 518
                       P N  P+   +  SEL  LI        V+++A    EP
Sbjct: 749 NIDGFKYAEAEIPLNERPEIDRWILSELNTLIK-------VVDDAYADYEP 792


>gi|332685710|ref|YP_004455484.1| valyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369719|dbj|BAK20675.1| valyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 884

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 33/197 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + K      +    +  N   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PNSIEKGRYKKWLEQDVFKPNGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDVIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY+             ++   ++   + ++ L                      +  
Sbjct: 73  RMQGYDTL-------WLPGMDHAGIATQAKVEEKL--------------------ATQGI 105

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +Y     NF E+ W    KD       + I +    L +  D          G    +R
Sbjct: 106 SRYDLGRKNFIEKVWQ--WKD----EYAEQIHEQWAKLGLSLDYRRERFTLDEGLSQAVR 159

Query: 275 DIIDNLARQGYVYEGIL 291
            +  +L  +G +Y G  
Sbjct: 160 KVFVDLYEKGLIYRGEY 176


>gi|58336685|ref|YP_193270.1| glutamyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|67461606|sp|Q5FM35|SYE_LACAC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|58254002|gb|AAV42239.1| glu-tRNA synthetase glurs [Lactobacillus acidophilus NCFM]
          Length = 499

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDSDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   K++  KY  +LL         
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKDIYQKYIDQLLEEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   +    +G      +
Sbjct: 106 AYYSYKTEEELEEQREEQRAMGVAPHYTY---EYEGMTADEIKQAQEEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------VDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|322385938|ref|ZP_08059579.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270053|gb|EFX52972.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 883

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243



 Score = 37.2 bits (85), Expect = 8.5,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|261405922|ref|YP_003242163.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282385|gb|ACX64356.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 662

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 113/330 (34%), Gaps = 48/330 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V      ++ G +I         R       
Sbjct: 16  PSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIE--------RKAAEAGK 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMKIIRDDL 249
                 +    G+       +++++   + +   E++   +V+D    +     I + + 
Sbjct: 68  TPQQFVDDIVAGIKDLWKKLDISNE---DFIRTTEKRHTTVVQDVFERLLKQDDIYKGEY 124

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +       + F  E     G+       ++ +  + Y +       +     + + D  Q
Sbjct: 125 EGWYCTPCESFFLERQLVNGNCPDCGRPVELVKEESYFFRMSKYVDRLLQYYEENPDFIQ 184

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVM-GS-------- 358
            + R   + ++  +P     G      +   Y +  K +    ++IYV   +        
Sbjct: 185 PVSRKNEMINNFIKP-----GLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYITAL 239

Query: 359 -----DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIK 399
                D S Y K   A    +S++  + + +   ++ +  D                  K
Sbjct: 240 GYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMKDGK 299

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           MSK  G+ +    ++D  G D++R+ +L  
Sbjct: 300 MSKSKGNVVDPVTMIDRYGLDALRYYLLRE 329


>gi|251798405|ref|YP_003013136.1| valyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546031|gb|ACT03050.1| valyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 883

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 92/333 (27%), Gaps = 65/333 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +        G  +            I     N TG +H+GH     + D + 
Sbjct: 10  TYDPKAAEQKWYDFWQQGQFFKAGQRPDAKPFTIVIPPPNVTGMLHIGHALDFTLQDIII 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++                                   LP   + G+  +   +
Sbjct: 70  RTKRMQGFDTL--------------------------------WLPGTDHAGIATQTKVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V D+  +     IR+    + +  D          G   
Sbjct: 98  QKLREQGLSRYDLGREKFLEQVWDWK-ELYAGTIREQWGKMGLSLDYSRERFTLDEGLSK 156

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L  +G +Y G          +    D +            +  PL   DGS 
Sbjct: 157 AVREVFVRLHEKGLIYRGKKIINWDPAARTALSDIEVEYKELNGHLYHLQYPL--KDGSG 214

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                 +     + E        ++G             A AV  +  +   L+ +++ L
Sbjct: 215 H-----ITVATTRPET-------MLGD-----------TAVAVHPEDERYKHLIGQMIVL 251

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
              G  I +       I   +V  + GS +V+ 
Sbjct: 252 PVVGREIPI-------IADEYVEKDFGSGAVKI 277



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 20/171 (11%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           ++R +   + V G D   Y      +  A+     QI      +  L RD    KMSK  
Sbjct: 476 FKRYYPTDVLVTGYD-IVYFWVARMIFTALEF-TDQIPFKDVLMHGLVRDAEGRKMSKSL 533

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           G+ +    V++  G+D++R+M+       + L F   KV++               +  +
Sbjct: 534 GNGVDPLDVIENYGADAMRYMISTGSTPGQDLRFRIEKVEQARNF---------ANKIWN 584

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
             R     F  ++ + F  + I  +S   T+E  ++  L      +  AT 
Sbjct: 585 ASR-----FALMNLEGFTSSDIDIKSNLGTAERWILHRL---NETVREATR 627


>gi|256850916|ref|ZP_05556305.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661130|ref|ZP_05862044.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934172|ref|ZP_06339450.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615978|gb|EEU21166.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548067|gb|EEX24043.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301786|gb|EFA94052.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 64/212 (30%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +      +    +  +   K    +I     N TG +H+GH     + DTL  L
Sbjct: 9   NPNEVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRL 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   +++  + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIAMQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     L +  D         +G    +
Sbjct: 98  -RKQGLDRHQMGREKFVKQVWDWK-DEYANIIKSQWAKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RKVFVQLYNEGLIYRGQYIINWDPKLETALSD 187



 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 18/103 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +  +           K   +V+L  L+   RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFTKQ----------KPFDHVVLHGLI---RDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
            G+ I    V+D+ G+D++R+ +L      +   F + K+   
Sbjct: 526 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSA 568


>gi|256852085|ref|ZP_05557472.1| glutamyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661345|ref|ZP_05862258.1| glutamyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934877|ref|ZP_06340109.1| glutamate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615497|gb|EEU20687.1| glutamyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547800|gb|EEX23777.1| glutamyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301058|gb|EFA93370.1| glutamate--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 499

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 107/308 (34%), Gaps = 35/308 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNFLFARHNKGTLVLRIEDTDTAR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+ +K   +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGKYGPYRQSERKEIYNKLIKQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I++       +G      +
Sbjct: 106 AYYSYMTEEELEAQREEQRAMGIAPHYVY---EYQDMTADEIKEAQAKAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK KT +  D+ +  + F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPKGKTYEWDDIVKGHISFESDTIGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A   +  +       +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHIANTPKQLVVYEAFGWEPPKFGH----MTLIINAATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 272 EQYRDLGY 279


>gi|227533673|ref|ZP_03963722.1| glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227188657|gb|EEI68724.1| glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 502

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q+  L     
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHNNGTLVLRIEDTDTKR-NVADGEKSQMENL----H 70

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +   K++ DK   +L++          K ++ ++  
Sbjct: 71  WLGIDWDEGPD----KGGDFGPYRQSERKDIYDKLIKQLVD----------KGFAYESYR 116

Query: 243 --KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + ++ D +A   +H++   E ++     +   D I     +G         P  KT +
Sbjct: 117 TEEELKADREAQKARHEMPHYEYEYEGMTDAEKADAIAAAKAKGLEPVIRFHIPMDKTYE 176

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  +G D    + K DG  TY   + A     +     +++   G DH
Sbjct: 177 WDDIVKGKISIDANTLGGDF--VIQKRDGMPTY---NFAVVVDDHMMQISHVLR--GDDH 229

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +  A+  A   +      +   +  +       K+SKR    +       E+G 
Sbjct: 230 IANTPKQLAIYDAFGWEPP----IFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGY 284


>gi|217076407|ref|YP_002334123.1| glutamyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036260|gb|ACJ74782.1| glutamyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 473

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 103/290 (35%), Gaps = 41/290 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R             L  S+ 
Sbjct: 7   APSPTGYLHVGGARTALFNFLYARKMNGKFILRIEDTDLERS-----EKEFEEGLIESMK 61

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G Y G Y +    ++ +KY+ +L+           K Y+    +
Sbjct: 62  WLGLNWDEGPDVG---GGY-GPYRQSERLDIYNKYAQKLVEEG-----KAYKVYAYPEEI 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +R++L +   +   +  E      +     + I     +G     I      K     
Sbjct: 113 EKLREELLSQG-KAPHYTRE----MLESFTTPERIKEYEEKGL-KPAIYFQMPRKEYVLN 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-S 361
           D+ + Q++F+   +GD     +++S+G   Y   + A     Y     ++I   G DH S
Sbjct: 167 DIVKGQVVFKEGTLGDF---AIIRSNGVPIY---NFACVIDDYLMKITHVIR--GDDHLS 218

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             VK+L A+  A+     +        V +       K+SKR G      
Sbjct: 219 NTVKQL-AIYEALGWNPPEFGH-----VSMILGPDAKKLSKRHGATSVEE 262


>gi|83314453|ref|XP_730365.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23490069|gb|EAA21930.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 285

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 32/193 (16%)

Query: 2   YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG--- 58
           +++   ++ +KN  K+I     +   I  + ++E  +        T   M + R +    
Sbjct: 93  HIYEILNNAIKNVAKKIKKNENL--LIPKQYLLEDNKLYDDYTYQTGIIMFIERDINDGI 150

Query: 59  ---------LDPLTIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
                     +     + I+  +K      +D + ++  G +N+ +   Y++        
Sbjct: 151 FINKNENEDKNVR---QKIIESLKNECSDIIDDILLSQNGILNIRIKDEYVKTKFCKFHA 207

Query: 108 SGIEYGRNLIGKG-------------TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             IE+ ++   K                V +++   N    MHVGH +   +G  L ++ 
Sbjct: 208 QLIEHIQSKQDKKNRKNCEPKRDDKKKVVVLDYCGVNMAKHMHVGHLKSLFIGYALNNIY 267

Query: 155 AFSGYEVTREYYI 167
            +  + V    +I
Sbjct: 268 DYFSFNVKSRXHI 280


>gi|253575687|ref|ZP_04853023.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845025|gb|EES73037.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 891

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 92/333 (27%), Gaps = 65/333 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +      +    +            I     N TG +H+GH     + D L 
Sbjct: 17  TYDPKAAEQKWHRYWLENGFFKAGQRPDAKPYTIVIPPPNVTGMLHIGHALDLTLQDILT 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+             ++   ++   R +Q L             GV    +G+
Sbjct: 77  RTKRMQGYDAL-------WLPGMDHAGIATQTRVEQRLRE----------QGVSRYDLGR 119

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E           F E+ W    KD         I +    +    D          G   
Sbjct: 120 E----------KFLEQVW--AWKDQYA----GTIHEQWAKMGASLDYSRERFTLDEGLSQ 163

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L  +G +Y G          +    D +            +  PL  SDGS 
Sbjct: 164 AVREVFVKLYEKGLIYRGKYIINWDPAARTALSDIEVEYKEVNGHLYHLQYPL--SDGS- 220

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y          + E        ++G             A AV  +  +   L+ + +RL
Sbjct: 221 GYITV----ATTRPET-------MLGD-----------TAVAVHPEDERYRHLVGKTLRL 258

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
                   +  R    I   +V  E GS +V+ 
Sbjct: 259 P-------IVDREIPIIADEYVEKEFGSGAVKI 284



 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 95/276 (34%), Gaps = 34/276 (12%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           D   +  +  I ++++   +   ++       ++  +   +  ++     +     G   
Sbjct: 396 DRFEKIYLNWI-ENVRDWCVSRQLWWGHRIPAWYCDETGEM--VVARSEEEARAKLGRDD 452

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
             + +           L   ST+   D D   LK      YF   +         G+D +
Sbjct: 453 IRQDEDVLDTWFS-SALWPFSTLGWPDEDSADLKR-----YFPTSV------LSTGYD-I 499

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           IY         V R+   +   + +    +VL+  LV   RD    KMSK  G+ +    
Sbjct: 500 IYFW-------VARMIFTSLEFTGQVPFKDVLIHGLV---RDSEGRKMSKSLGNGVDPIE 549

Query: 413 VVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           V+++ G+D++R+M+       + L F + +V++       F  +   A   ++       
Sbjct: 550 VIEKYGADAMRYMLSTSNTPGQDLRFRWERVEQARN----FANKIWNASRFALMNLEGVK 605

Query: 472 FPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYP 506
           + D+D                + +  ++   +  Y 
Sbjct: 606 YEDIDISGELSTADRWILHRMNETAKEITRLIDAYE 641


>gi|297205794|ref|ZP_06923189.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148920|gb|EFH29218.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 883

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 64/212 (30%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +      +    +  +   K    +I     N TG +H+GH     + DTL  L
Sbjct: 13  NPNEVEEGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRL 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   +++  + +  L                        
Sbjct: 73  KRMQGYD--TLYLPG-----MDHAGIAMQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     L +  D         +G    +
Sbjct: 102 -RKQGLDRHQMGREKFVKQVWDWK-DEYANIIKSQWAKLGLSLDYSRERFTLDKGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 160 RKVFVQLYNEGLIYRGQYIINWDPKLETALSD 191



 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 18/103 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +  +           K   +V+L  L+   RD    KMSK 
Sbjct: 484 TGYD-IIFFWVSRMIFQSLHFTKQ----------KPFDHVVLHGLI---RDEQGRKMSKS 529

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
            G+ I    V+D+ G+D++R+ +L      +   F + K+   
Sbjct: 530 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSA 572


>gi|293381072|ref|ZP_06627093.1| glutamyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977951|ref|ZP_07789697.1| glutamate--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|290922372|gb|EFD99353.1| glutamyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895258|gb|EFQ44326.1| glutamate--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 499

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A  +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAAGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|229107725|ref|ZP_04237362.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228675698|gb|EEL30905.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 660

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                +++ +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVEPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|282882188|ref|ZP_06290827.1| glutamate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297953|gb|EFA90410.1| glutamate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 492

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 125/336 (37%), Gaps = 53/336 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R  ++      I  L  S+ 
Sbjct: 9   APSPTGFLHIGGLRTALYNYLFARNKGGKFILRIE--DTDRTRFV---QGAIENLIDSLK 63

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           W    Y + ++  D  + +    G Y++    ++  KY  +L+      +        + 
Sbjct: 64  WAGITYDEGVFVEDGKIVQKGEYGPYIQSQRLDIYKKYVDQLIENGY-AYYCFCSKDRLD 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +  R  +K    ++D    E         P+ +    +A  G  Y   L  P +K  
Sbjct: 123 HLREEQR--IKGQVPKYDGLCRE--------IPLDEAKKRIA-SGEEYVVRLKLPHNKDI 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R ++   +  +    D+ L+KSDG  TY    +A     +  G  ++  V G +
Sbjct: 172 TFNDLVRGKVTINTNEID---DQVLMKSDGFPTYH---MAVVVDDHLMGITHV--VRGEE 223

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--V 417
                 +   +  A+  +  +  V L  ++   R     K+SKR GD +++    +   +
Sbjct: 224 WLSSTPKHVFLYQALGWESPEY-VHLPTVLNKDR----KKLSKRQGD-VSVEDFKERGYL 277

Query: 418 GSDSVRFMMLWRKNSELLD-----------FDFCKV 442
               + ++ L   + E  D           FDF +V
Sbjct: 278 PEGIINYLALVGWSPEDGDEIMNMDELVSKFDFDRV 313


>gi|227903246|ref|ZP_04021051.1| glutamyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227869051|gb|EEJ76472.1| glutamyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 499

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   K++  KY  +LL         
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKDIYQKYIDQLLEEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ +         ++       I+   +    +G      +
Sbjct: 106 AYYSYKTEEELEEQREEQRAMGVAPHYTY---EYEGMTADEIKQAQEEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------VDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|196251128|ref|ZP_03149807.1| glutamyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209369|gb|EDY04149.1| glutamyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 321

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 101/292 (34%), Gaps = 29/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D    +     S     +  
Sbjct: 10  APSPTGHLHIGGARTALFNYLFAR---HYGGKMVVRIEDTDIERNVEGGEESQLENLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  + +    G Y +    ++  KY +ELL           K +     ++  R++
Sbjct: 67  GIDYDESIDKDGGYGPYRQTERLDIYRKYVNELLEQG-----HAYKCFCTPEELEREREE 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A  I    +  +            + +  L  QG  Y   L  P+ KT +  D+ R +
Sbjct: 122 QRAAGIAAPQYSGKC------RHLTPEQVAELEAQGKPYTIRLKVPEGKTYEVDDLVRGK 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F S  +GD     ++K++G  TY FA  +     +    F       G +H     + 
Sbjct: 176 VTFESKDIGDW---VIVKANGIPTYNFAVVIDDHLMEISHVFR------GEEHLSNTPKQ 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V      +  Q   +      L  +    K+SKR    I       E+G 
Sbjct: 227 LMVYEYFGWEPPQFAHM-----TLIVNEQRKKLSKRDESIIQFVSQYKELGY 273


>gi|227879316|ref|ZP_03997182.1| glutamyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256849117|ref|ZP_05554550.1| glutamyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|295692210|ref|YP_003600820.1| glutamyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|227861085|gb|EEJ68738.1| glutamyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256713893|gb|EEU28881.1| glutamyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|295030316|emb|CBL49795.1| Glutamyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 499

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVKGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+  KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDYGPYRQSERKEIYQKYIDQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A  +         ++       I+   D    +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAAGVAPHYTY---EYEGMTADEIKQAQDEAKAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ +  L F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPEMETYSWDDIVKGHLEFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVSNTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|167766367|ref|ZP_02438420.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|317496795|ref|ZP_07955125.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711958|gb|EDS22537.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|291559231|emb|CBL38031.1| valyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316895807|gb|EFV17959.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 879

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 68/250 (27%), Gaps = 43/250 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPGAIEERLYQKWLDNKYFHAEVDETKQPYTIVIPPPNITGKLHMGHALDETLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                                        + PG     +  
Sbjct: 68  RFKKMQGYNAL-------------------------------------WIPGTDHASIAT 90

Query: 212 ELA-----DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           E+       +   E  +   EK+L    D+  +    II + +K L    D         
Sbjct: 91  EVKIINALKEEGIEKEDLGREKFLERAWDWKEEYGGTII-EQMKKLGSSCDWDRERFTMD 149

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            G    ++++   L  +GY+Y G          Q    D +            +  P++ 
Sbjct: 150 EGCSEAVKEVFIKLYEKGYIYRGSRIINWCPVCQTSISDAEVEYEDQAGHFWHIKYPVVG 209

Query: 327 SDGSYTYFAA 336
           S+G Y   A 
Sbjct: 210 SEGEYVEIAT 219


>gi|124003834|ref|ZP_01688682.1| isoleucyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990889|gb|EAY30356.1| isoleucyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 1156

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 86/243 (35%), Gaps = 42/243 (17%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             + R       I   I+ +ED       G    + + ++   + G + E  +   ++  
Sbjct: 507 WNLSRQRY--WGIPLPIWRTEDGKEEECIGSVYELYEAVEKSIKAGLMQENPVGEFENIK 564

Query: 299 TQKCDMDRKQLL--------FRSTMVGDDV----DRPLLKSDGSYTYFAADLA------- 339
             K D D   LL        F+            D  L+  +G   Y   DL        
Sbjct: 565 EVKTDDDGSTLLSADVISAYFKRKNFDLHRPYVDDIVLVSPNGKPMYREQDLIDVWFDSG 624

Query: 340 ---YFKCKYERGFDNMIYVM----------GSDH-SGYVKRLEAVAAAVSEKKAQINVLL 385
              Y +  Y     +MI             G D   G+   L A+A  + +  A  NV+ 
Sbjct: 625 AMPYAQLHYPFQNKDMIDERDEFPADFISEGVDQTRGWFFTLHAIAGMLFDSVAFKNVVS 684

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
             LV    D    KMSKR G+ +     +D  G+D+ R+ M+   N  + L FD   VKE
Sbjct: 685 TGLV---LDAEGRKMSKRLGNAVDPFETMDAHGADTTRWYMISNANPWDNLKFDIEGVKE 741

Query: 445 QSK 447
            S+
Sbjct: 742 VSR 744


>gi|331265790|ref|YP_004325420.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682462|emb|CBZ00079.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 883

 Score = 57.6 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E++L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRERFLEKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAINPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264



 Score = 38.4 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 63/168 (37%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S              +++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------DRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|332799454|ref|YP_004460953.1| Valyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697189|gb|AEE91646.1| Valyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 883

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +             +   +  K     I     N TG +H+GH     + D L   
Sbjct: 10  DPKEVEDKWYEFWEKENLFHAEIDSKKRPFTIVIPPPNVTGQLHMGHALNNTLQDILIRT 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D           + +  E 
Sbjct: 70  KRMQGYS---------------------------ALWLPGTDHAGIATEAKVKEQLADEG 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             KY     +   EK+L  V ++  +    II   LK L    D          G    +
Sbjct: 103 LSKY-----DLGREKFLERVWEWKEKYGDTIINQ-LKKLGSSCDWSRLRFTMDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L  +G +Y G
Sbjct: 157 REVFVRLYEKGLIYRG 172


>gi|21910809|ref|NP_665077.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895501|ref|NP_801851.1| valyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759036|sp|Q8K6M9|SYV_STRP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21905014|gb|AAM79880.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810747|dbj|BAC63684.1| putative valine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 882

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGQGI------------------- 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 103 ------TRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|291547952|emb|CBL21060.1| valyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 884

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 71/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKGIEDRLYKKWMDNGYFHAKVNPDKKPFTIVMPPPNVTGQLHMGHALDETMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +  + L     D  E      ++KH   
Sbjct: 68  RFKRMQGYEAL-------WQPGTDHAAIATEVKVTEKLRKEGIDKNEIG-RDEFMKH-AW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              ++Y  +++N                         LK L    D          G   
Sbjct: 119 AWKEEYGGKIINQ------------------------LKKLGASADWERERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D + +          ++ P++  +G +
Sbjct: 155 AVQEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVVHEDQDGFFWHINYPIVGEEGRF 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219


>gi|254431649|ref|ZP_05045352.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626102|gb|EDY38661.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 929

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 37/238 (15%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG+
Sbjct: 524 TGFD-IIFFW-------VARMTMMAGAFTGRMPFRDVYIHGLV---RDENNRKMSKSAGN 572

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    +++  G+D++RF ++        D      +       V   +    +  +  R
Sbjct: 573 GIDPLPLIERYGADALRFALVREVAGAGQDIRLDYDRNDGSSGTVETARNFANKLWNATR 632

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL---AF 523
            A     +L  +       P  +E ++ +  ++  LA      E A      Y+L   A 
Sbjct: 633 FA---LMNLGGETPSSLGRPLTAELESEDRWILSRLAR---TAEQAAELYGSYRLGEAAK 686

Query: 524 YLYDLASVFHGHWSHGRENPR---LRFVQANNRKLTMMRLQLVHAVASIINSGL-NII 577
            LY+ A      W+   +         +   +            A   ++   L  ++
Sbjct: 687 LLYEFA------WNDLCDQYIEWAKPRLAGEDPAART-------AARRVLAHSLEALL 731



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 52/201 (25%), Gaps = 35/201 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+       +   +   +  +    G   ++     N TG +H+GH     + DT+ 
Sbjct: 22  TYDPAGTEARWQAAWEAAGAFHPDPEAPGEPFSVVIPPPNVTGSLHMGHGFETALIDTIV 81

Query: 152 SLMAFSGYEVTREYYINDAGA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                 G  V         G    +    ++  +  QA   +  DL              
Sbjct: 82  RFQRLRGRNVLCLP-----GTDHASIAVQTILEKQIQAEGGSKDDLGRDA---------- 126

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                        F E  W    +          I   L+ L    D          G  
Sbjct: 127 -------------FLERAWSWKAESGGT------IVGQLRRLGYSVDWGRERFTLDPGLS 167

Query: 271 SPIRDIIDNLARQGYVYEGIL 291
           + + +    L  QG +Y G  
Sbjct: 168 AAVAEAFVRLHEQGLIYRGEY 188


>gi|322412300|gb|EFY03208.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 883

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGQGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|327470389|gb|EGF15845.1| valine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 883

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|255102750|ref|ZP_05331727.1| methionyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308571|ref|ZP_05352742.1| methionyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 645

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 136/433 (31%), Gaps = 82/433 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  DT+A    F GY+V      ++ G +I   A+            
Sbjct: 15  PSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI------------ 62

Query: 192 NDSDLPEGYYPGVYLKHVG--KELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRD 247
            +  + E  Y    +K +       D    + +   E++   I++     +     I + 
Sbjct: 63  -EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G+  P     D       V E       SK       DR
Sbjct: 122 EYEGRYCTPCESFWTESQLLEGNKCP-----DCGRETYLVKEESYFFRLSKY-----EDR 171

Query: 307 KQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM---- 356
            + LF+         R         D      +     F    +  FD  ++IYV     
Sbjct: 172 LKELFKDDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDAL 231

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP-------- 397
                       +D   + K   A    V ++  + + ++   + +              
Sbjct: 232 CNYITALGYMTDND-EEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHG 290

Query: 398 ------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                  KMSK  G+ +    +++  G D++++ +L        +F F +    +  N V
Sbjct: 291 WILFADDKMSKSKGNVVYPEPIIERYGIDTLKYFLLR-------EFAFGQDGSYTHRNFV 343

Query: 452 FYVQYA-YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL---------IVH 501
             + Y       ++  +   +    +  + P   +    + D  E  +         +  
Sbjct: 344 TRINYDLANDLGNLISRTVAMVEKYNNGIIPTAKVSTNFDADLKEQAVSTRENFEAEMDK 403

Query: 502 LAEYPRVIENATI 514
           + ++   +E+   
Sbjct: 404 M-QFHEALESVWK 415


>gi|270610259|ref|ZP_06221656.1| arginyl-tRNA synthetase domain protein [Haemophilus influenzae
          HK1212]
 gi|270318102|gb|EFA29350.1| arginyl-tRNA synthetase domain protein [Haemophilus influenzae
          HK1212]
          Length = 74

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 1  MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
          M + +  S ++K  +         +       +I +      G    N  +  ++ LGL+
Sbjct: 1  MNIQSILSDKIKQAMILAGADQSCDA------LIRQSGKPQFGDYQANGIIAAAKKLGLN 54

Query: 61 PLTIAELIVARIKIDPDVDS 80
          P   A+ ++  +++    + 
Sbjct: 55 PREFAQKVLDNLQLSDIAEK 74


>gi|2266985|emb|CAA74281.1| MEtRS [Arabidopsis thaliana]
          Length = 616

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/408 (15%), Positives = 132/408 (32%), Gaps = 64/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D+++      G +V      ++ G +I T A +           
Sbjct: 80  VNAPPHMGSAYTTIAADSISRFQRLLGKKVIFITGTDEHGEKIATSAAA----------- 128

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           N  + PE             +  D    + +   + K   IVK++  +      I R D 
Sbjct: 129 NGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADY 188

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E +    +  P+  +  +       +     Y+  L    ++  +  
Sbjct: 189 EGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFV 248

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLKS-------DGSYTYFAAD--LAYFKCKYERG- 348
                ++  Q   +S +    + R L+         D    Y   D  L Y     E   
Sbjct: 249 QPSYRLNEVQSWIKSGLRDFSISRALVDXGIPVPDDDKQTIYVWFDALLGYISALTEDNK 308

Query: 349 ---------FDN--MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                    F     ++++G D    H+ Y     A+  +   +  ++         L +
Sbjct: 309 QQNLETAVSFGWPASLHLIGKDILRFHAVY---WPAMLISAGLELPKMVFGHGF---LTK 362

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---KNSELLDFD-FCKVKEQSKEN 449
           DGM  KM K  G+ +    +V + G D+VR+  L      N      D F K+      N
Sbjct: 363 DGM--KMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLAN 420

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            +  +     R   + ++  +    +D  +    V  +++     E  
Sbjct: 421 TIGNLL---NRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKA 465


>gi|329929628|ref|ZP_08283327.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328936005|gb|EGG32459.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 662

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/330 (14%), Positives = 113/330 (34%), Gaps = 48/330 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V      ++ G +I         R       
Sbjct: 16  PSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIE--------RKAAEAGK 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMKIIRDDL 249
                 +    G+       +++++   + +   E++   +V++    +     I + + 
Sbjct: 68  TPQQFVDDIVAGIKDLWKKLDISNE---DFIRTTEKRHTTVVQEVFERLLKQDDIYKGEY 124

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +       + F  E     G+       ++ +  + Y +       +     + + D  Q
Sbjct: 125 EGWYCTPCESFFLERQLVNGNCPDCGRPVELVKEESYFFRMSKYVDRLLQYYEENPDFIQ 184

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVM-GS-------- 358
            + R   + ++  +P     G      +   Y +  K +    ++IYV   +        
Sbjct: 185 PVSRKNEMINNFIKP-----GLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYITAL 239

Query: 359 -----DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIK 399
                D S Y K   A    +S++  + + +   ++ +  D                  K
Sbjct: 240 GYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMKDGK 299

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           MSK  G+ +    ++D  G D++R+ +L  
Sbjct: 300 MSKSKGNVVDPVTMIDRYGLDALRYYLLRE 329


>gi|308190109|ref|YP_003923040.1| glutamate--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624851|gb|ADN69156.1| glutamate--tRNA ligase [Mycoplasma fermentans JER]
          Length = 463

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 97/284 (34%), Gaps = 45/284 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L         +    +   +Q+  LA 
Sbjct: 9   APSPTGYLHIGGARTALFCYLYAKHFKGDFVFRLED----TDVKRNVADGERSQLENLAW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +    +   + + EL+     K     K Y   
Sbjct: 65  L-------GIVPDESPLKPNKACGKYRQSEKLDRYQEIADELV-----KRGLAYKAYDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++   ++     I           +  +   I +       +   Y   L  PK  T 
Sbjct: 113 EELEAQHEESNKKGIA-------SFRYDRNWLKISEAEKAKREKAKAYSIRLSMPKDVTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R  + F S  +GD     + KSDG  TY   + A     ++    +++   G +
Sbjct: 166 EWEDLVRGNISFNSNDIGDW---VIQKSDGYPTY---NFAVVVDDHDMKISHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           H     +  A+  A++ +           + +  +    K+SKR
Sbjct: 218 HITNTPKQLAIYQALNWEAPYFGH-----LTVITNMEGKKLSKR 256


>gi|268610250|ref|ZP_06143977.1| methionyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 661

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 71/488 (14%), Positives = 142/488 (29%), Gaps = 85/488 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV----- 181
           + S NP    H+GHC   V  D++A      GY+V      ++ G +I   A        
Sbjct: 14  YPSGNP----HIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGLKIEQKAAEQGVTPK 69

Query: 182 ------------FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
                        W+Y    Y+      +  Y    ++ + K L DK           K+
Sbjct: 70  EYVDVIVDRFKNLWKYMNISYDRYIRTTDD-YHVEAVQKIFKALYDK-GYIYKGEYSGKY 127

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             + + +   + +       +    +   +  E+ +          I   L    Y+   
Sbjct: 128 CTLCESFWTDSQLDENGCCPEC--HRPVKYAKEEAYFFKMSPFADRIEKLLLETDYLRPK 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAY---F 341
                      K  ++   +   +   G     DD     +  D    Y  A L Y    
Sbjct: 186 TRAVELVNNFIKPGLEDLCVSRTTFKWGVPVSFDDKHVVYVWIDALSNYITA-LGYENSA 244

Query: 342 KCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              YE+ +   ++++  D    +     A+  A+     +   +   +    ++G   KM
Sbjct: 245 YNDYEKYWPADVHMVAKDIMRFHAIIWPAMLMALEIPLPKHLAVHGWITMAGKNGESEKM 304

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +    + +  G D++R+ +L                     + +F  +    R
Sbjct: 305 SKSLGNVVDPFVLGERYGQDAIRYHILRE--------------MALGADSLFSNEIMINR 350

Query: 461 CRSIFRQAKDIFPDLDFDLFPR---NVIPQESE---FDTSELQLIVHLAEYPRV------ 508
             S               +  +     IP E E    D     +I+ L   P V      
Sbjct: 351 INSDLANGFGNLVSRTVAMVDKYFGGTIPSEREDDALDEEFRNVILGLL--PEVDKYVDE 408

Query: 509 --IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ----- 561
             ++ A            +++  S  + +          +       +    RL      
Sbjct: 409 TKLKQALET---------IFEGVSRANKYIDETEPWKLGK------DESKKARLASVLYN 453

Query: 562 LVHAVASI 569
           L+ A+   
Sbjct: 454 LLEAIRIT 461


>gi|239623672|ref|ZP_04666703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521703|gb|EEQ61569.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 880

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 66/245 (26%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    + G  +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPADIEDRLYEKWLKGKYFHAEVNRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +    L     D  +    G        
Sbjct: 67  RYKRMQGYEAL-------WQPGTDHAAIATEVKVIDKLKKEGIDKADLGRDG-------- 111

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                +  E   + +E    IVK              L  L    D          G   
Sbjct: 112 -----FLKECWKWRDEYGTRIVKQ-------------LHKLGSSADWDRERFTMDEGCSD 153

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +GY+Y+G          Q    D +            ++ P+    G +
Sbjct: 154 AVLEVFVKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVEQDGFFWHINYPVAGEPGRF 213

Query: 332 TYFAA 336
              A 
Sbjct: 214 VEIAT 218


>gi|213026525|ref|ZP_03340972.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 46

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 6/42 (14%)

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           P+ +  YLYD+A +F G + H         + A N  +   R
Sbjct: 3   PHVMCAYLYDVAGLFSGFYEHC------PILSAENDAVRNSR 38


>gi|293567619|ref|ZP_06678963.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291589720|gb|EFF21524.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 881

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|227550359|ref|ZP_03980408.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897234|ref|ZP_05676887.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378006|ref|ZP_06624184.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227180498|gb|EEI61470.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833799|gb|EEV60220.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643371|gb|EFF61503.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 881

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGNKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|238855288|ref|ZP_04645607.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664646|ref|ZP_05865498.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932419|ref|ZP_06337844.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238832180|gb|EEQ24498.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561711|gb|EEX27683.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303368|gb|EFA95545.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 63/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL  L
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRL 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     L +  D         +G    +
Sbjct: 98  -RKQGLDRHQMGREKFVKQVWDWK-DEYANIIKSQWAKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RKVFVQLYNEGLIYRGQYIINWDPKLETALSD 187



 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 18/103 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +  +           K   +V+L  L+   RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFTKQ----------KPFDHVVLHGLI---RDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
            G+ I    V+D+ G+D++R+ +L      +   F + K+   
Sbjct: 526 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSA 568


>gi|255505616|ref|ZP_05347190.3| valine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266928|gb|EET60133.1| valine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 889

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 71/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L + L    +    +   +        I     N TG +H+GH     + D + 
Sbjct: 14  TYDPKGLEERLYQKWMDNGYFHAKVNPDKKPFTIVMPPPNVTGQLHMGHALDNTMQDIII 73

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +  + L     D  E      +LKH   
Sbjct: 74  RFKRMQGYEAL-------WQPGTDHAAIATEVKVIEKLKEQGIDKDEIG-REEFLKH-AW 124

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              ++Y S ++N                         LK L    D          G   
Sbjct: 125 AWKEEYGSRIINQ------------------------LKKLGSSADWERERFTMDEGCSK 160

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +GY+Y+G          Q    D + L          ++ P++  +G Y
Sbjct: 161 AVEEVFVKLYEKGYIYKGSRIINWCPVCQTSISDAEVLHEDQEGHFWHINYPVVGEEGKY 220

Query: 332 TYFAA 336
              A 
Sbjct: 221 VEIAT 225


>gi|153812839|ref|ZP_01965507.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174]
 gi|149831051|gb|EDM86140.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174]
          Length = 895

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 72/245 (29%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 19  TYDPKGLEDRLYQKWMDNGYFHAKVNPDKKPFTIVMPPPNVTGQLHMGHALDETMQDILI 78

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D          +  + K
Sbjct: 79  RFKRMQGY---------------------------EALWQPGTDHAAIATEVKVIDKLKK 111

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK     L+   E++L     +  +   KII   LK L    D          G   
Sbjct: 112 EGIDK-----LDIGREEFLKHAWAWKEEYGGKIINQ-LKKLGASADWERERFTMDEGCSK 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D +            ++ P++  +G +
Sbjct: 166 AVQEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPIVGEEGRF 225

Query: 332 TYFAA 336
              A 
Sbjct: 226 VEIAT 230


>gi|257888392|ref|ZP_05668045.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293570381|ref|ZP_06681438.1| valyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257824446|gb|EEV51378.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|291609559|gb|EFF38824.1| valyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 881

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|69246247|ref|ZP_00603860.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879526|ref|ZP_05659179.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883460|ref|ZP_05663113.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890246|ref|ZP_05669899.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894823|ref|ZP_05674476.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258616812|ref|ZP_05714582.1| valyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559758|ref|ZP_05831938.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293559745|ref|ZP_06676266.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622457|ref|ZP_06701479.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938905|ref|ZP_07846172.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943091|ref|ZP_07849892.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948112|ref|ZP_07851513.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951622|ref|ZP_07854667.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993873|ref|ZP_07859207.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996714|ref|ZP_07861737.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195348|gb|EAN09797.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813754|gb|EEV42512.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819118|gb|EEV46446.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826606|gb|EEV53232.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257831202|gb|EEV57809.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074426|gb|EEW62748.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291598004|gb|EFF29114.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291606293|gb|EFF35706.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589152|gb|EFR67997.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591683|gb|EFR70528.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596218|gb|EFR75063.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598193|gb|EFR77038.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641779|gb|EFS06359.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645448|gb|EFS10028.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 881

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|258645329|ref|ZP_05732798.1| glutamate--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402678|gb|EEW96225.1| glutamate--tRNA ligase [Dialister invisus DSM 15470]
          Length = 486

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 95/292 (32%), Gaps = 46/292 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP H+G  R A+          G  L  +        TRE   N    +     L
Sbjct: 10  APSPTGPFHIGGARSALFNWLVARHQNGKFLVRIEDTDLARSTRESEEN---IKKAMKWL 66

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            ++W         D  +  G   G Y +     L +     LL   +  +     D   +
Sbjct: 67  GLYW---------DEGIDVGGENGPYRQTERLPLYNAAVQRLLEEGKAYYCYCSADELEE 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +  + +++    +   H   ++E    +      +  I             L  PK    
Sbjct: 118 SRKEQLKEGKTPIYNNHCSHLTEKQIEQYKSEGRKPAI------------RLRVPKDGVF 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              DM R  + F++  VGD +   ++KSDG   Y   + A        G  ++I     +
Sbjct: 166 AFDDMVRGHVEFQAAGVGDFI---IVKSDGIPVY---NFAVVIDDASMGITHVIR--AEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           H     R  A+  A+  +  +        + L       KMSKR G      
Sbjct: 218 HLSNTPRQIAIYQALGYEIPKFGH-----ISLILGSDHKKMSKRHGATSVDE 264


>gi|239825617|ref|YP_002948241.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805910|gb|ACS22975.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 648

 Score = 57.2 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 111/368 (30%), Gaps = 124/368 (33%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V    Y+   G                    
Sbjct: 15  PSGKLHIGHAYTTVAGDAMARYKRLRGYDVM---YL--TGT------------------- 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK   +     V  +++ I++  K 
Sbjct: 51  -----------------------DEHGQKIQRKAEEKG--VTPQQYVDEIVEGIQELWKK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           L+I +D FI            +  I   L  QG +Y G                      
Sbjct: 86  LDISYDDFI--RTTQERHKKVVEKIFARLVEQGDIYLGEYEGWYCTPCESFYTERQLVDG 143

Query: 296 ---SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------A 335
                      +  +   FR +     VDR L   + +  +                   
Sbjct: 144 NCPDCGRPVEKVKEESYFFRMSKY---VDRLLQYYEENPEFIQPESRKNEMINNFIKPGL 200

Query: 336 ADLAYFKCKYERGF------DNMIYVM-------------GSDHSGYVKRLE-AVAAAVS 375
            DLA  +  ++ G        ++IYV              G+D+    ++   A    V 
Sbjct: 201 EDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITALGYGTDNDEKFRKYWPADVHLVG 260

Query: 376 EKKAQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDS 421
           ++  + + +   ++ +  D                  KMSK  G+ +    ++D  G D+
Sbjct: 261 KEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDA 320

Query: 422 VRFMMLWR 429
           +R+ +L  
Sbjct: 321 LRYYLLRE 328


>gi|139473421|ref|YP_001128137.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271668|emb|CAM29901.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 882

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVVHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|322388969|ref|ZP_08062540.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144338|gb|EFX39745.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 1218

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 345 NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 404

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 405 KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 439

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 440 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 491

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 492 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 551

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 552 ATTRPETMFGDVAVAVNPEDPRYKDLI 578


>gi|297820298|ref|XP_002878032.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323870|gb|EFH54291.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 615

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 131/408 (32%), Gaps = 64/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D++A      G +V      ++ G +I T A +           
Sbjct: 79  VNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAA----------- 127

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           N  + PE             +  D    + +   + K   IVK++  +      I R D 
Sbjct: 128 NGRNPPEHCDIISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADY 187

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E +    +  P+  +  +       +     Y+  L    ++  +  
Sbjct: 188 EGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFV 247

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLK-------SDGSYTYFAAD--LAYFKCKYE--- 346
                ++  Q   +S +    + R L+         D    Y   D  L Y     E   
Sbjct: 248 QPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTEDNK 307

Query: 347 ---------RGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                     G+   ++++G D    H+ Y     A+  +      ++         L +
Sbjct: 308 QQNLETAVSLGWPASLHLIGKDILRFHAVY---WPAMLMSAGLNLPKMVFGHGF---LTK 361

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---KNSELLDFD-FCKVKEQSKEN 449
           DGM  KM K  G+ +    +V + G D+VR+  L      N      D F K+      N
Sbjct: 362 DGM--KMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLAN 419

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            +  +     R   + ++  +     D  +    V  +++     E  
Sbjct: 420 TIGNLL---NRTLGLLKKNCESTLVEDSTVAAEGVPLKDTVEKLVEKA 464


>gi|259502839|ref|ZP_05745741.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169206|gb|EEW53701.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 883

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 102/358 (28%), Gaps = 66/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  DPAAVETGRYQWWIDQGLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+E 
Sbjct: 70  KRMQGYDVL-------WVPGMDHAGIATQAKVEARLRK----------QGISRYDLGRE- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ +E                II      L I  D          G    +
Sbjct: 112 --KFVQQVWDWKDE-------------YADIIHQQWAKLGISVDYDRERFTLDEGLNKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +  +L ++G +Y G          +    D +  +      G         +DG+ T+
Sbjct: 157 RKVFVDLYKKGLIYRGTYIINWDPQARTALSDIE--VVHKDDQGAFYHVKYPFTDGT-TF 213

Query: 334 FAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D +     + E  F                          ++   ++        L 
Sbjct: 214 NGKDYIEIATTRPETMF-------------------------GDEAVAVHPDDERYKELV 248

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              + + +  R  + I   +V  + G+  V+         +  DF   K     + N 
Sbjct: 249 GKKVKVPLVDREIEIIADEYVTPDFGTGMVKI----TPAHDPNDFKVGKRHNLPELNT 302


>gi|257885020|ref|ZP_05664673.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820872|gb|EEV48006.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 881

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGNKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|225389238|ref|ZP_03758962.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme
           DSM 15981]
 gi|225044699|gb|EEG54945.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme
           DSM 15981]
          Length = 880

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 72/245 (29%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    + G  +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPADIEDRLYQKWLDGKYFHAKVNKDKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D          +  + +
Sbjct: 67  RYKRMQGY---------------------------EALWQPGTDHAAIATEVKVIDKLKQ 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK+     +   + +L    ++  +   +I+   L  +    D          G   
Sbjct: 100 EGIDKH-----DLGRDGFLEKCWEWKKEYGTRIVNQ-LHKMGSSADWDRERFTMDEGCSD 153

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +GY+Y+G          Q    D +            ++ P++   G +
Sbjct: 154 AVLEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVEQEGKFWHINYPVVGEPGRF 213

Query: 332 TYFAA 336
              A 
Sbjct: 214 VEIAT 218


>gi|13605910|gb|AAK32940.1|AF367354_1 AT3g55400/T22E16_60 [Arabidopsis thaliana]
 gi|22137164|gb|AAM91427.1| AT3g55400/T22E16_60 [Arabidopsis thaliana]
          Length = 616

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 131/408 (32%), Gaps = 64/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D++A      G +V      ++ G +I T A +           
Sbjct: 80  VNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAA----------- 128

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           N  + PE             +  D    + +   + K   IVK++  +      I R D 
Sbjct: 129 NGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADY 188

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E      +  P+  +  +       +     Y+  L    ++  +  
Sbjct: 189 EGLYCVNCEEYKDEKGLLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFV 248

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLK-------SDGSYTYFAAD--LAYFKCKYERG- 348
                ++  Q   +S +    + R L+         D    Y   D  L Y     E   
Sbjct: 249 QPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTEDNK 308

Query: 349 ---------FDN--MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                    F     ++++G D    H+ Y     A+  +   +  ++         L +
Sbjct: 309 QQNLETAVSFGWPASLHLIGKDILRFHAVY---WPAMLMSAGLELPKMVFGHGF---LTK 362

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---KNSELLDFD-FCKVKEQSKEN 449
           DGM  KM K  G+ +    +V + G D+VR+  L      N      D F K+      N
Sbjct: 363 DGM--KMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLAN 420

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            +  +     R   + ++  +    +D  +    V  +++     E  
Sbjct: 421 TIGNLL---NRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKA 465


>gi|261209049|ref|ZP_05923453.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566557|ref|ZP_06446979.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293557231|ref|ZP_06675779.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|294615719|ref|ZP_06695572.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617315|ref|ZP_06696955.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260076961|gb|EEW64684.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161656|gb|EFD09534.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591439|gb|EFF23095.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596424|gb|EFF27677.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291600595|gb|EFF30899.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 881

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  NPQEVEAGRYQHWLEQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190


>gi|226311411|ref|YP_002771305.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094359|dbj|BAH42801.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 890

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 52/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P           +    +            I     N TG +H+GH     + D +   
Sbjct: 18  DPKAAENKWYPYWIEKQFFKAERDPNKRPFTIVIPPPNVTGKLHLGHALDTTLQDIITRT 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY     +        ++   ++   R +  L                        
Sbjct: 78  KRMQGYSAL--FLPG-----MDHAGIATQARVEATL------------------------ 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++        IR+  + L +  D          G    +
Sbjct: 107 -REEGISRHDLGREKFVEKVWEWKHIY-ASHIREQWEKLGLALDYSRERFTMDEGLSQAV 164

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L  +G +Y G
Sbjct: 165 REVFVRLYEKGLIYRG 180


>gi|290990321|ref|XP_002677785.1| valyl tRNA synthetase [Naegleria gruberi]
 gi|284091394|gb|EFC45041.1| valyl tRNA synthetase [Naegleria gruberi]
          Length = 1105

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 36/200 (18%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             PS + +   S       +         +  I     N TG +H+GH   A + D+L  
Sbjct: 66  FDPSRVEQDWYSWWEEKGLFKGEDSTTKPQYTILLPPPNVTGSLHIGHALTASIQDSLCR 125

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
               +GY V     ++ AG   Q+                                  V 
Sbjct: 126 YKKMNGYNVLWVPGVDHAGISTQVA---------------------------------VE 152

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K++A +      +   E++L  V  +  +   + I + +KA+    D             
Sbjct: 153 KKIAKEEGKTRHDLGREEFLKRVWSWKEEYGNR-IDNQMKAMGSMTDWSRKVFTMDAQFS 211

Query: 271 SPIRDIIDNLARQGYVYEGI 290
           S + +    LAR G +Y   
Sbjct: 212 SAVLECFVRLARDGLIYRDA 231


>gi|157690875|ref|YP_001485337.1| glutamyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166979998|sp|A8F960|SYE_BACP2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|157679633|gb|ABV60777.1| glutamate--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 483

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 99/293 (33%), Gaps = 32/293 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    +     S     Q  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---SQGGKFIIRIEDTDQKRNVEGGEESQLRHLQWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  + +    G Y +    ++  KY  ELL      K     ++   +   +I R 
Sbjct: 67  GIDWDESIDKDGGYGPYRQSERNDIYKKYYDELLEKDLAYKCYCTAEELEEEREAQIARS 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +      E++             D L  +G         PK +  +  DM + 
Sbjct: 127 EMPRYSGKCSHLSKEEE-------------DKLIAEGREPSIRFRVPKGEIIKFDDMVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKR 366
           ++ F +  +GD     ++K DG+ TY       F    +     M +++ G DH     +
Sbjct: 174 EISFETDGIGDF---VIVKKDGTPTYN------FAVAVDDHLMKMTHILRGEDHISNTPK 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              +  A         V L   + L  +    K+SKR    I        +G 
Sbjct: 225 QIMIFNAFGWD-----VPLFGHMTLIVNENRKKLSKRDESIIQFIEQYKNLGY 272


>gi|56961843|ref|YP_173565.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56908077|dbj|BAD62604.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 655

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 110/376 (29%), Gaps = 129/376 (34%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V                      RY      
Sbjct: 15  PSGKLHIGHTYTTVAGDAMARYKRLRGYDV----------------------RYLTGT-- 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    +EK +  ++      M+K I++  K 
Sbjct: 51  -----------------------DEHGQKIEQKAKEKGISPLE--YTNEMVKPIKELWKK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP------------------- 292
           L+I HD FI      +   + +  I + L  QG +Y G                      
Sbjct: 86  LDISHDDFI--RTTEKRHTNMVEKIFEQLVEQGDIYLGEYEGWYCVSDETFYGERELVDP 143

Query: 293 -----------PPKSKTTQKCDMDRKQLLFRSTMVGD----------DVDRPLLKSDGSY 331
                                 +  K   FR +   D          D  +P  + +   
Sbjct: 144 IKDESGNIIGGKSPDSGHPVEKVREKSYFFRMSKYADRLLAFYEENPDFIQPASRKNEMI 203

Query: 332 TYF----AADLA------YFKCKYERGFDNMIYVM--------------GSDHSGYVKRL 367
             F      DLA       +  K      +++YV                +D + Y K  
Sbjct: 204 NNFIKPGLQDLAVSRTSFTWGVKVPSNPKHVVYVWIDALTNYITALGYGTADDTLYQKYW 263

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDG--------------MPIKMSKRAGDFITLRHV 413
            A    V +   + + +   ++ +  D                  KMSK  G+ +    +
Sbjct: 264 PADVHLVGKDILRFHTIYWPIMLMALDLPLPKKVFGHGWFLTKDGKMSKSKGNVVDPAPL 323

Query: 414 VDEVGSDSVRFMMLWR 429
           +D  G D++R+ +L  
Sbjct: 324 IDHFGLDAIRYYLLRE 339


>gi|313889902|ref|ZP_07823543.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121750|gb|EFR44848.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 883

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 79/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPTEVEAGRYQKWLDQEVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 99  -REQGITRYDLGREKFLEKVWEWK-DEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +  T + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMTYMLEDGSRGLQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 466

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 63/421 (14%), Positives = 140/421 (33%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +    ++ +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMNHMQEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       D P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYH----ELGATIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E+  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        + + SE+      ++    ++  V+++         +  + YDLA + + 
Sbjct: 325 IEEREAIATDLEEHSEYIDQIETILR---QFEAVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|50914656|ref|YP_060628.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822714|sp|Q5XAW8|SYV_STRP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50903730|gb|AAT87445.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 882

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVVHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
          Length = 466

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 63/421 (14%), Positives = 140/421 (33%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +    ++ +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMNHMQEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       D P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYH----ELGATIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E+  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        + + SE+      ++    ++  V+++         +  + YDLA + + 
Sbjct: 325 IEEREAIATDLEEHSEYIDQIETILR---QFEAVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|257869995|ref|ZP_05649648.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804159|gb|EEV32981.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 879

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        ++   +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPQEVEAGRYQEWLAKDLFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L             G+    +G+E 
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEEKLRE----------QGISRYDLGRE- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + EE                 IR+    L +  D          G    +
Sbjct: 112 --KFVDQVWEWKEE-------------YAGHIREQWAKLGLSLDYSRERFTLDEGLSDAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +  +Y G          +    D
Sbjct: 157 RKVFVTLYEKDLIYRGEYIINWDPQARTALSD 188


>gi|161507301|ref|YP_001577255.1| valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348290|gb|ABX26964.1| Valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 879

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L ++G +Y G          Q    D
Sbjct: 156 KKVFVQLYKEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|313471900|ref|ZP_07812392.1| valine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|313449025|gb|EEQ68181.2| valine--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 883

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 63/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL  L
Sbjct: 13  NPNEVEKGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRL 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 73  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      EK++  V D+       II+     L +  D         +G    +
Sbjct: 102 -RKQGLDRHQMGREKFVKQVWDWK-DEYANIIKSQWAKLGLSLDYSRERFTLDKGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 160 RKVFVQLYNEGLIYRGQYIINWDPKLETALSD 191



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 18/103 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +  +           K   +V+L  L+   RD    KMSK 
Sbjct: 484 TGYD-IIFFWVSRMIFQSLHFTKQ----------KPFDHVVLHGLI---RDEQGRKMSKS 529

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
            G+ I    V+D+ G+D++R+ +L      +   F + K+   
Sbjct: 530 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSA 572


>gi|251782968|ref|YP_002997271.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391598|dbj|BAH82057.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 882

 Score = 57.2 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 82/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L             G+    +G+  
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRG----------QGISRYDLGR-- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  ++  + +E                 I++    + +  D          G    +
Sbjct: 110 -DKFLDKVWEWKDE-------------YATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|116872981|ref|YP_849762.1| valyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741859|emb|CAK20983.1| valyl-tRNA synthetase, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 882

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + +           +           +I     N TG +H+GH     + D +  + 
Sbjct: 15  PSKVEEGKYKWWQEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L  N+    +             E  
Sbjct: 75  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKENNISRYDLGR--EKFIDKTWEWK 125

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                          IR+  + L +  D          G    ++
Sbjct: 126 EEYAD------------------------FIREQWEKLGLGLDYSRERFTLDDGLSDAVK 161

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 162 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 192



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 18/165 (10%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G   P  S   ++ D D     F S +            +  + +F      
Sbjct: 425 KETGEIYVGEKEPENSSEWEQ-DEDVLDTWFSSALWPFSTMGWPDTENQDFQHFFP---- 479

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   S        +        E+  +  ++      L RD    KM
Sbjct: 480 -TNTLVTGYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDSEGRKM 527

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+ 
Sbjct: 528 SKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVES 572


>gi|62079155|ref|NP_001014236.1| DALR anticodon-binding domain-containing protein 3 [Rattus
           norvegicus]
 gi|81910617|sp|Q641Y9|DALD3_RAT RecName: Full=DALR anticodon-binding domain-containing protein 3
 gi|51980421|gb|AAH82046.1| DALR anticodon binding domain containing 3 [Rattus norvegicus]
 gi|149018516|gb|EDL77157.1| similar to hypothetical protein FLJ10496 [Rattus norvegicus]
          Length = 538

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 31/190 (16%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
              D +   +++F ML       L      +  +  ++  F V Y  AR  ++F   K  
Sbjct: 358 ETFDILSVATIKFEMLSTAPQGQLLLAHSTISTKGTKSGTF-VMYNCARLATLFEGYKHG 416

Query: 472 FPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI-------ENATIAQEP--YK- 520
                +  FP  + +      D  E  L+     +  V+       +  ++A  P  +  
Sbjct: 417 MEQGLYPTFPLVSSLDFSLLHDEGEWLLL-----FNSVLPFLDLLSQTVSLASTPGLHIP 471

Query: 521 -----LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINS 572
                +  +L  L+  F  +++      R+  +      L      RLQL+ AV  + ++
Sbjct: 472 VRTEMVCKFLVQLSMDFSSYYN------RVHILGEPRPHLFGQMFARLQLLRAVREVFHT 525

Query: 573 GLNIIGVESP 582
           GL ++G+   
Sbjct: 526 GLAMLGLPPL 535


>gi|289167262|ref|YP_003445529.1| valyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288906827|emb|CBJ21661.1| valyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 883

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKANPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264



 Score = 38.0 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|238855657|ref|ZP_04645957.1| glutamate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664901|ref|ZP_05865752.1| glutamyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282933606|ref|ZP_06338975.1| glutamate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472551|ref|ZP_07813041.1| glutamate--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831723|gb|EEQ24060.1| glutamate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529989|gb|EEQ68990.1| glutamate--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561384|gb|EEX27357.1| glutamyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302261|gb|EFA94494.1| glutamate--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 499

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 107/308 (34%), Gaps = 35/308 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNFLFARHNKGTLVLRIEDTDTAR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   KE+ +K   +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGEYGPYRQSERKEIYNKLIKQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I++       +G      +
Sbjct: 106 AYYSYMTEEELEAQREEQRAMGIAPHYVY---EYQDMTADEIKEAQAKAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK KT +  D+ +  + F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 HIPKGKTYEWDDIVKGHISFESDTIGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   V  A   +  +       +  +       K+SKR    +   
Sbjct: 218 VLR--GDDHIANTPKQLVVYEAFGWEPPKFGH----MTLIINAATGKKLSKRDESVLQFI 271

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 272 EQYRDLGY 279


>gi|160939307|ref|ZP_02086658.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438270|gb|EDP16030.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC
           BAA-613]
          Length = 879

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 70/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    + G  +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPADIEDRLYQKWLDGKYFHAEVNRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +    L     D  +    G +LK    
Sbjct: 67  RYKRMQGYEAL-------WQPGTDHAAIATEVKVIDKLKKEGVDKADLGRDG-FLKE-CW 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  D+Y + ++N                         L  L    D          G   
Sbjct: 118 KWRDEYGTRIVNQ------------------------LHKLGSSADWDRERFTMDHGCSD 153

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +GY+Y+G          Q    D +            ++ P++   G +
Sbjct: 154 AVLEVFVKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVEQNGFFWHINYPVVGEPGRF 213

Query: 332 TYFAA 336
              A 
Sbjct: 214 VEIAT 218


>gi|315611716|ref|ZP_07886638.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315316131|gb|EFU64161.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 882

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLEEDVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 103 ------TRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 263


>gi|226325813|ref|ZP_03801331.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758]
 gi|225205937|gb|EEG88291.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758]
          Length = 634

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 62/404 (15%), Positives = 124/404 (30%), Gaps = 66/404 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D +A      GY+V  +   ++ G +I   A   
Sbjct: 10  TTAIAYTSGKP----HIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKAEEA 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ + N   ++         +  +     DK+     ++ E++   I K    Q  
Sbjct: 66  GVTPKEFVDNVSGEIK-------RIWDLMNTSYDKFIRTTDDYHEKEVQKIFKKLYDQG- 117

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQG 284
             I +   + +     + F +E     G                    +    D L    
Sbjct: 118 -DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPVQPAKEEAYFFKMSKYADRLIEYI 176

Query: 285 YVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +   + P   K            Q   + R    +   +  D      +  D    Y 
Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 335 AADLAYFKC-----KYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLL 385
              + Y         + + +   ++++G D    H+ Y         A+     +   + 
Sbjct: 237 TG-IGYHCDGESDEMFNKNWPADLHLIGKDIIRFHTIY---WPIFLMALGLPLPK--QVF 290

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
                L  DG   KMSK  G+ +    +VD  G D+VR+ +L            +  + E
Sbjct: 291 GHPWLLQGDG---KMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVE 347

Query: 445 QSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
           +   +    +     R  S+  +        K +  ++D DL  
Sbjct: 348 RLNSDLANTLGNLVNRTISMTNKYFGGTVTDKGVAEEVDADLKA 391


>gi|153814976|ref|ZP_01967644.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|317501588|ref|ZP_07959782.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088546|ref|ZP_08337459.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847544|gb|EDK24462.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|316897005|gb|EFV19082.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407808|gb|EGG87302.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 881

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 51/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYDPKAIEEKLYEKWCENKYFHAEVDRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G        
Sbjct: 68  RYKRMEGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGREG-------- 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                       F E  W         +     I + LK L I  D          G   
Sbjct: 113 ------------FLERTWQ------WKEEYAGTIENQLKKLGISCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEKGYIYKG 172


>gi|119356265|ref|YP_910909.1| glutamyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166200168|sp|A1BDK8|SYE_CHLPD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|119353614|gb|ABL64485.1| glutamyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 502

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 60/304 (19%), Positives = 111/304 (36%), Gaps = 42/304 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          GD +  +      +  R   +   GAQ N L  
Sbjct: 11  APSPTGYLHVGGLRTALYNYLFVKKMKGDFVLRI-----EDTDRSRRV--EGAQQNLLKT 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             +      + +   +L  G   G Y++    E+  KY  ELL   E K+       S +
Sbjct: 64  LEWAG---IVPDESPEL--GGDFGPYIQSERLEIYKKYCDELL---EGKYAYYCFATSEE 115

Query: 240 AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                     + L  +++  ++ E+       S IR  +     Q   Y   +  P   +
Sbjct: 116 LEENRQLQLKQGLQPKYNRKWLPEEMGGSMPSSEIRKKM----EQNAPYVIRMKVPDYVS 171

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ R  + F S+ +    D+ L+KSDG  TY     A     +   F ++I   G 
Sbjct: 172 VWFEDLIRGPVEFDSSTID---DQVLMKSDGFPTYHF---ASVIDDHLMEFTHIIR--GE 223

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           +    + +   +      +  +        + L  +    K+SKR GD     ++     
Sbjct: 224 EWLPSMPKHLLLYEFFGWEPPKFAH-----LPLLLNPDRSKLSKRQGDVAVEDYIRKGYS 278

Query: 419 SDSV 422
           ++++
Sbjct: 279 AEAI 282


>gi|327461992|gb|EGF08321.1| valine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 883

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|224542354|ref|ZP_03682893.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524736|gb|EEF93841.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
           15897]
          Length = 468

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 59/402 (14%), Positives = 125/402 (31%), Gaps = 51/402 (12%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             L + + +  E  +    +  KV+I           H+G+ R  +V D L     + G 
Sbjct: 22  MRLFNTLTNKKEEFK--PIEEGKVSIYICGPTVYNHAHIGNTRPMIVFDVLRRTFEYLGN 79

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +VT      D   +I         +  +A    + +L + Y         G  + D    
Sbjct: 80  DVTFVSNYTDVDDKI--------IKAAKAEGITEKELTDKYIKAYEDVRAGLNIEDPTYK 131

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +     + +  +          +I     A  +  D++             +  + + 
Sbjct: 132 PRVTETMPEIIDFI--------QALIDKGY-AYEVDGDVYF-----------RVTKVKEY 171

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQL----LFRSTMVGDDVDRPLLKSDGSYTYFA 335
               G   E ++     +T    D  ++      L++ T  G   D P  K  G   +  
Sbjct: 172 GMLSGIKVEDLIAGASDRTLSVDDKKKESTTDFALWKKTDEGIQFDTPWSK--GRPGWHT 229

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD 394
             +      ++ G    I + G          E  +A +++     I         +  D
Sbjct: 230 ECVVMINKLFKDGK---IDIHGGGQDLKFPHHENEIAQSMAYNGHPIANYWMHNQMINID 286

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK---------EQ 445
           G   KMSK  G+ +  + ++ E G +  +++ML       L+     +          E 
Sbjct: 287 GE--KMSKSLGNVLWAKDLIVEFGCNVFKWLMLSTHYRNPLNLTVDVIAGVRKEVSKVEN 344

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           + +N   Y+Q  +       ++  D   +   D    ++   
Sbjct: 345 ATKNASLYLQVNHVPAHDYKKETVDAMVNALEDDLNTSLALT 386


>gi|289434832|ref|YP_003464704.1| hypothetical protein lse_1467 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171076|emb|CBH27618.1| valS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 882

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 52/203 (25%), Gaps = 33/203 (16%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                    +           +I     N TG +H+GH     + D +  +    G++  
Sbjct: 23  YKWWQEKEFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFD-- 80

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
             Y        ++   ++   + +  L   +    +             E  ++Y+    
Sbjct: 81  TLYLPG-----MDHAGIATQAKVEAKLKEENISRYDLGR--ENFIDKTWEWKEEYAD--- 130

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                                 IR+  + L +  D          G    ++ +   L  
Sbjct: 131 ---------------------FIREQWEKLGLGLDYSRERFTLDAGLSDAVKKVFVKLYN 169

Query: 283 QGYVYEGILPPPKSKTTQKCDMD 305
           +G +Y G          +    D
Sbjct: 170 KGLIYRGQYIINWDPEAKTALSD 192



 Score = 38.4 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           L RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+ 
Sbjct: 518 LVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVES 572


>gi|256751388|ref|ZP_05492267.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749770|gb|EEU62795.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 632

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 107/327 (32%), Gaps = 43/327 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A       ++ +  
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAREKGMSPKEYVDG 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               + +       L  +     D++      + EE    I     +     I + + + 
Sbjct: 74  IVEWIKD-------LWKIMDISYDQFIRTTDKYHEEIVQKIF--TKLYEKGDIYKSEYEG 124

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        ++ +  +GY +       +         D  Q  
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRPVERVKEEGYFFRLSKYGDRLLQYYDEHPDFIQPE 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-------------G 357
            R   + +      +KS     + +     +  K      ++IYV               
Sbjct: 185 SRRNEMINF-----IKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYS 239

Query: 358 SDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSK 402
           +DH    K+   A    V ++  + + ++   + +  D                  KMSK
Sbjct: 240 TDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSK 299

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +  + +V + G D+VR+ +L  
Sbjct: 300 SKGNVVDPKELVSKYGVDAVRYFLLRE 326


>gi|227824942|ref|ZP_03989774.1| glutamyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905441|gb|EEH91359.1| glutamyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 486

 Score = 56.8 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 94/289 (32%), Gaps = 52/289 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA      G +        D          ++    +  
Sbjct: 6   APSPTGPFHIGGARSALFNWLLA---KRMGGKFVLRIEDTDRKRSTPESEENIKAALKWL 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP------------EEKWLPIVKDY 236
               D     G   G Y +    ++  KY+ +LL               EE+   ++KD 
Sbjct: 63  GITWDEGADVGGPYGPYHQMERLDIYKKYTDQLLKEGKAYYCYCTPEELEEERQALLKDC 122

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +   M   R   +    Q+                         ++G      L  P++
Sbjct: 123 KMPRYMGKCRHLTEEQKAQY------------------------EKEGRKPSIRLKVPEN 158

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +T    DM R  + F S  +GD     ++KSDG  TY   + A     Y     ++I   
Sbjct: 159 ETIVVHDMVRGDVEFDSNGIGDF---VIVKSDGIPTY---NYAVVIDDYLMHITHVIR-- 210

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             +H     R   V  A+  +K          + L       KMSKR G
Sbjct: 211 AEEHLSNTPRQLLVYEALGFEKPVFAH-----ISLILGTDHTKMSKRHG 254


>gi|257413959|ref|ZP_05591859.1| valine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201723|gb|EEV00008.1| valine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 267

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 70/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 43  TYDPKSIEDRLYKKWEDNGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILT 102

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+   +D          ++++ K
Sbjct: 103 RYKRMQGYN---------------------------ALWQPGTDHASIATEVKVIENLKK 135

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  DK      +   E +L    ++  +   +II   LK +    D         +G   
Sbjct: 136 QGIDK-----RDLGREGFLEKCWEWRDEYGSRIINQ-LKKMGSSADWERERFTMDKGCSE 189

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +G +Y+G          +    D +            ++ P++  +G +
Sbjct: 190 AVLEVFVKLYEKGLIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEEGRF 249

Query: 332 TYFAA 336
              A 
Sbjct: 250 VEIAT 254


>gi|241341902|ref|XP_002408576.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215497365|gb|EEC06859.1| arginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 120

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           S N   P HVGH R  ++G+ L +L  F G +V  E
Sbjct: 1   SPNIAKPFHVGHLRSTIIGNVLCNLHQFVGDDVYVE 36


>gi|300741759|ref|ZP_07071780.1| methionine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380944|gb|EFJ77506.1| methionine--tRNA ligase [Rothia dentocariosa M567]
          Length = 515

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 105/334 (31%), Gaps = 38/334 (11%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + + NP    H+GH    +  D LA      G++V      ++ G ++ T A   
Sbjct: 9   TTAISYPNGNP----HIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQ 64

Query: 182 FWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPI---- 232
               ++    N +            Y + +     D Y +         E   + +    
Sbjct: 65  GKTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYA 124

Query: 233 ----VKDYSVQAMMKIIRDDLKALNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               V+D +  A  +    D +   I       +  E+ +          ++D    +GY
Sbjct: 125 GWYSVRDEAYYAEDETEERDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLDLYKNEGY 184

Query: 286 VY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           V+       L            + R    +   + G+D     +  D    Y    L Y 
Sbjct: 185 VFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTG-LGY- 242

Query: 342 KCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--LLCELVRLYRDG 395
                  F       ++++G D    + R  ++        A + +   +     L  +G
Sbjct: 243 PNTDGELFTKYWPADLHLIGKD----ITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNG 298

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ +    +V   G D VRF ++  
Sbjct: 299 E--KMSKSVGNVVDPADLVAAFGLDQVRFFLMRE 330


>gi|24380137|ref|NP_722092.1| valyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81450887|sp|Q8DSL1|SYV_STRMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24378137|gb|AAN59398.1|AE015005_4 putative valyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 883

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEADRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLPDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|15606596|ref|NP_213976.1| valyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226195|sp|O67411|SYV_AQUAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2983819|gb|AAC07375.1| valyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 1165

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 41/226 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +  S   +    Y      K  K ++     N TG +H+GH   A + D +   
Sbjct: 7   NPREIEEKWSRYWIEKALYHVEKPDKRKKFSVVIPPPNVTGSLHMGHALNATLQDVIVRW 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E              +   ++  +  ++ L                        
Sbjct: 67  QRMRGRECV-------WVPGFDHAGIATQYVVEKQL------------------------ 95

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K     L    E++L  V ++  ++    IR  L  L +  D          G    +
Sbjct: 96  -AKEGKSRLELGREEFLKKVWEWVPKS-RNAIRTQLTKLGVSVDWKRERFTLDEGFSRAV 153

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLF 311
           R     L  +G +Y                S    + + ++  L +
Sbjct: 154 RKAFRTLFEEGLIYRAEYIVNWCPNDRTALSDLEVEYEEEKGSLWY 199



 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 24/178 (13%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +     +     +V +  LV   RD    K
Sbjct: 752 YPTDLLVTGFD-IIFFW-------VARMIMMGTHFMKDIPFYDVYVHALV---RDKYGRK 800

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    +++  G+D++RF +           D    +E+ +        Y + 
Sbjct: 801 MSKTIGNVIDPLDIIERYGADALRFTLAILTVQGR---DIKLAEEKFEG-------YKHF 850

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               I+  A+ +  +   D   R  IP  +     +  +I  L E    +  A    +
Sbjct: 851 -ANKIWNAARYVLMNTPEDFIAR--IPYMAPLKPEDKWIITKLNETAEEVNKALENYQ 905


>gi|125718618|ref|YP_001035751.1| valyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498535|gb|ABN45201.1| Valyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 890

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 18  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 78  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 107 -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 165 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 224

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 225 ATTRPETMFGDVAVAVNPEDPRYKDLI 251


>gi|262282776|ref|ZP_06060544.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262067|gb|EEY80765.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 882

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 104 -------RYDLGREKFLDKVWEWK-DEYATTIKQQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 156 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 216 ATTRPETMFGDTAVAVNPNDDRYKDLI 242


>gi|327462898|gb|EGF09219.1| valine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 882

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    ++     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSVVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
             G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 ADGEIYVGEEAPEGDGWTQDPDVLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|297205040|ref|ZP_06922436.1| glutamate--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149618|gb|EFH29915.1| glutamate--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 505

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 107/307 (34%), Gaps = 35/307 (11%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
              K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + +
Sbjct: 8   AKQKIRVRY-APSPTGHLHIGNARTALFNFLFARHNKGTLVLRIEDTDTAR-NVEGGSKS 65

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D    +G   G Y +   KE+ +K   +LL+         
Sbjct: 66  QMENL----HWLGIDWDEGPD----KGGKYGPYRQSERKEIYNKLIKQLLDEG-----KA 112

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              Y  +  ++  R++ +A+ I         ++       I++       +G      + 
Sbjct: 113 YYSYMTEEELEAQREEQRAMGIAPHYVY---EYQDMTADEIKEAQAKAEAKGLKPVVRIH 169

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            PK KT +  D+ +  + F S  +G D    + K DG  TY   + A     +     ++
Sbjct: 170 IPKGKTYEWDDIVKGHISFESDTIGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISHV 224

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +   G DH     +   V  A   +  +       +  +       K+SKR    +    
Sbjct: 225 LR--GDDHIANTPKQLVVYEAFGWEPPKFGH----MTLIINAATGKKLSKRDESVLQFIE 278

Query: 413 VVDEVGS 419
              ++G 
Sbjct: 279 QYRDLGY 285


>gi|83588921|ref|YP_428930.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83571835|gb|ABC18387.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 651

 Score = 56.8 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 71/511 (13%), Positives = 147/511 (28%), Gaps = 145/511 (28%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH     + DTLA      GY+V                           L  
Sbjct: 15  PSDKLHIGHALTTTMADTLARYKRLRGYDVY-------------------------FLTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +                      D++  ++     E  L  ++   V  ++   ++  + 
Sbjct: 50  S----------------------DEHGQKIQRKAREANLEPIQ--YVDRIVATFQELWRR 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           LNI ++ FI            ++ ++  +  QG +Y+                       
Sbjct: 86  LNISYNDFI--RTTEPRHARVVQALLQKIYDQGDIYKSTYEGWYCTPCETFWTERQLVDG 143

Query: 296 ---SKTTQKCDMDRKQLLFRSTMVGD----------DVDRPLLKSDGSYTYF---AADLA 339
                      +  +   FR +   D          D  +P+ + +   ++      DL 
Sbjct: 144 NCPDCGRPVELVKEESYFFRMSKYADRLLQYIKDHPDFIQPVTRRNEMISFIEGGLEDLC 203

Query: 340 YFKCKYERGF------DNMIYVMG--------------SDHSGYVKRLEAVAAAVSEKKA 379
             +  ++ G        ++IYV                +D   + K   A    V +   
Sbjct: 204 ISRTTFDWGIPVPMDPKHVIYVWFDALTNYISALGYGTADDHLFRKYWPAAVHLVGKDIV 263

Query: 380 QINVLLCELVRLYRDGMP--------------IKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + + ++  ++ +     P               KMSK  G+ +    ++D  GSD++R+ 
Sbjct: 264 RFHTIIWPIILMAAGIEPPRQVFGHGWLLVDGGKMSKSRGNVVDPMILIDRYGSDAIRYF 323

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +L         +   +    ++ N      +     R+     K     +D    P    
Sbjct: 324 LLREMPYGADGYYSEEAL-INRYNTDLANDFGNLLSRTTAMIEKFNGGVIDPPSAPE--- 379

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS---VFHGHWSHGREN 542
                 D     L   +   P  ++NA    E      +   LA+   + +   ++    
Sbjct: 380 ----PLDEELKNLAAGI---PDEVDNALNHYE------FARALAAIWRLVNR--ANKYIE 424

Query: 543 PRLRFVQANNRKLTMMRLQ-----LVHAVAS 568
               +  A +      RLQ     L  AV  
Sbjct: 425 ETAPWALARDPGQKQ-RLQTVLYNLAEAVRQ 454


>gi|241894967|ref|ZP_04782263.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871685|gb|EER75436.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 888

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 66/252 (26%), Gaps = 39/252 (15%)

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            I   G      +P+ +        V    +  +   K    +I     N TG +H+GH 
Sbjct: 3   EIDMPG----KYNPTAVEAGRYDKWVQEKRFKPSGNKKARPYSIVIPPPNVTGKLHLGHA 58

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
               + D +       G++             ++   ++   + +Q L            
Sbjct: 59  WDTTLQDMIIRQKRMQGFDTL-------WLPGMDHAGIATQAKVEQRL------------ 99

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                         +      +   EK++  V D+        I+     L +  D    
Sbjct: 100 -------------AEDGISRYDLGREKFVEQVWDWK-NEYAATIKSQWGKLGLSLDYDRE 145

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 G    +R +   L  +G +Y G          +    D +  +      G    
Sbjct: 146 RFTLDEGLSEAVRKVFVTLYEKGLIYRGEYIINWDPKARTALSDIE--VIHQDDEGAFYH 203

Query: 322 RPLLKSDGSYTY 333
                 D   TY
Sbjct: 204 VQYPFVDKETTY 215



 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 84/243 (34%), Gaps = 46/243 (18%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G +Y G+  P  ++  ++ D D     F S      TM   D D    K      YF
Sbjct: 428 KETGEMYVGMEAPADAENWEQ-DSDVLDTWFSSALWPFSTMGWPDTDAEDFKR-----YF 481

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             D          G+D +I+         V R+   +   + ++   NVL+  L+   RD
Sbjct: 482 PTDT------LVTGYD-IIFFW-------VARMMFQSKEFTGRRPFKNVLIHGLI---RD 524

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ I    V+++ G+D++R+ +       + + F + K+         F 
Sbjct: 525 EQGRKMSKSLGNGIDPMDVIEKYGADALRWFLATGSTPGQDVRFSYTKMDSAWN----FI 580

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
            +   A    +   + D   +L  D    ++  Q              L+     I   T
Sbjct: 581 NKIWNASRYVLMNLSDDTKAELPADRTKLSLADQWI------------LSRLNATIAAVT 628

Query: 514 IAQ 516
              
Sbjct: 629 KNF 631


>gi|291537986|emb|CBL11097.1| valyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 887

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 97/333 (29%), Gaps = 64/333 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 12  TYDPKSIEDRLYKKWEDNGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILT 71

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+   +D          ++++ K
Sbjct: 72  RYKRMQGYN---------------------------ALWQPGTDHASIATEVKVIENLKK 104

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  DK      +   E +L    ++  +   +II   LK +    D         +G   
Sbjct: 105 QGIDK-----RDLGREGFLEKCWEWRDEYGSRIINQ-LKKMGSSADWERERFTMDKGCSE 158

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +G +Y+G          +    D +            ++ P++  +G +
Sbjct: 159 AVLEVFVKLYEKGLIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEEGRF 218

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
              A        + E  F +                   A AV+    +   ++ ++++L
Sbjct: 219 VEIAT------TRPETLFGD------------------TAVAVNPDDDRYKDIVGKMLKL 254

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
                   M+ R    I   +V  E G+  V+ 
Sbjct: 255 P-------MTDREIPVIADAYVDKEFGTGCVKI 280


>gi|327490058|gb|EGF21846.1| valine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 883

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|325695108|gb|EGD37010.1| valine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 881

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242



 Score = 37.2 bits (85), Expect = 8.7,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
             G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 420 ADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 480 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 515

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+
Sbjct: 516 EGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKM 563


>gi|323466819|gb|ADX70506.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 879

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGDKKVHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L ++G +Y G          Q    D
Sbjct: 156 KKVFVQLYKEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|325690919|gb|EGD32919.1| valine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKARPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  +  +I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKELI 243



 Score = 37.2 bits (85), Expect = 8.7,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
             G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 ADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|328946814|gb|EGG40951.1| valine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 883

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGNQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243



 Score = 37.6 bits (86), Expect = 5.5,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|94994796|ref|YP_602894.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548304|gb|ABF38350.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 82/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L             G+    +G+  
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRG----------QGITRYDLGR-- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  ++  + +E                 I++    + +  D          G    +
Sbjct: 110 -DKFLDKVWEWKDE-------------YATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|327474501|gb|EGF19906.1| valine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 883

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDSRYKDLI 243


>gi|319892709|ref|YP_004149584.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162405|gb|ADV05948.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464257|gb|ADX76410.1| valyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 876

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +         I     N TG +H+GH     + D L  +
Sbjct: 8   NPQEVEAGRYQKWLDQELFKPSDHSDKPTYTIVIPPPNVTGKLHLGHAWDTTLQDILTRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE    Y        ++   ++   + +  +   +  +               E 
Sbjct: 68  KRMQGYE--TLYLPG-----MDHAGIATQAKVEAKMR--EEGISRHDIGREKFLEKAWEW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y+S                         IR     L +  D          G    +
Sbjct: 119 KEEYAS------------------------FIRQQWAKLGLGLDYSRERFTLDSGLSQAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  ++  +G +Y G          +    D
Sbjct: 155 RKVFVDMYNKGLIYRGERIINWDPAARTALSD 186


>gi|332711287|ref|ZP_08431219.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332349836|gb|EGJ29444.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 323

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 5   ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64
           A  S+RL+  +        + + IL+ I +ER  D       +  A+ LSR +   PL I
Sbjct: 24  AALSTRLQQQISRAIVYSGIPQLILETIPLERCSDNTGVAYRSAIALKLSRAMQQSPLAI 83

Query: 65  AELIVARI--------KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107
           A  +   +        K +     V +A  G+IN +L+   L   L   + 
Sbjct: 84  AHQLTVSLPTITQDAGKQNLIEFEVEVAPPGWINFWLTDQGLATWLQDWIQ 134



 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 34/166 (20%)

Query: 442 VKEQSKENPVFYVQYAYARCRSIF----RQAKDIFPDLDF------------------DL 479
                  + +F VQYA+ARC S+     RQ       +D                   DL
Sbjct: 164 ALFSQDTSKIFRVQYAHARCCSLLGLAHRQGLIQIQSMDLKTSKGLIVVPYPIPWLKDDL 223

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY--KLAFYLYDLASVFHGHWS 537
                 P       +E  LI  + +              +  KLA     +++ F   + 
Sbjct: 224 GKGTKQPLIQLVHPAERLLIGQIMDLTDYFSGTESK---HWLKLAS---SVSNAFEQFYR 277

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NIIGVESP 582
             R       V+    +L   RL LV     ++ S L + +GV +P
Sbjct: 278 SCRIWGE---VKHQTPRLAQARLGLVGVTQVVLRSLLEDQLGVLAP 320


>gi|313901901|ref|ZP_07835320.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467842|gb|EFR63337.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 939

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     A A   +     VL    V    DG   KMSK  G+ +   
Sbjct: 552 LYLEGSDQHRGWFQSSLLTAVATRGRAPYRAVLTHGFVV---DGEGRKMSKSLGNVVDPN 608

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R   +       +      +K+ ++          Y + R+  R     
Sbjct: 609 DVIRRYGADVLRLWAVSSDYRGDVRISEDILKQMAE---------VYRKIRNTLRFLLAN 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D     R+ +P     +     L   LA+    +  A    + + +
Sbjct: 660 LGDFD---PARDAVPYGELGELDRWALAR-LAQVTERVRRAYEEYQYHLV 705


>gi|332971056|gb|EGK10026.1| methionine--tRNA ligase [Desmospora sp. 8437]
          Length = 668

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 109/336 (32%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+GH    V GD +A      GY+V      ++ G +I         R  +    
Sbjct: 23  PNDKLHIGHAYTTVAGDAMARYKRLRGYDVLYLTGTDEHGQKIE--------RRAKEQGM 74

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM---KIIRDD 248
              +  +G   G  ++ +  EL   Y   +    +      V     Q ++    I  D+
Sbjct: 75  APQEFVDGIVKG--IRKLWDELEISYDDFIRTTQD--RHKKVAQQLFQRLLDQGDIYLDE 130

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  Q Y +       +     + + D  
Sbjct: 131 YEGWYCTPCESFWTERQLEEGNCPDCHRSVEKVREQSYFFRLGKYADRLLQYYEENPDFI 190

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM-GS-- 358
           Q   R   +  +  +P             DLA  +  ++ G       ++++YV   +  
Sbjct: 191 QPESRKNEMIQNFIKP----------GLEDLAVSRTTFDWGIPVPGNPEHVMYVWIDALT 240

Query: 359 -----------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                      D S Y     A    V +   + + ++  ++ +  D             
Sbjct: 241 NYISALGYGTEDDSKYQTYWPADVHLVGKDIIRFHTVIWPILLMALDLPLPKKVFGHGFF 300

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D +R+ +L  
Sbjct: 301 QMKDGKMSKSKGNVVDPLPLIDRYGLDVLRYYLLRE 336


>gi|253580599|ref|ZP_04857863.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847970|gb|EES75936.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 884

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 74/245 (30%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L +  +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKGIEERLYTKWMDNGYFHAKVNPDKKPFTIVMPPPNVTGQLHMGHALDETMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D          +  + K
Sbjct: 68  RFKRMQGY---------------------------EALWQPGTDHAAIATEVKVIDKLKK 100

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK+     +   E++L     +  +   KII   LK L    D          G   
Sbjct: 101 EGIDKH-----DIGREEFLKHAWAWKEEYGGKIINQ-LKKLGASADWERERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D +            ++ P++  +G +
Sbjct: 155 AVQEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPIVGEEGRF 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219


>gi|328766262|gb|EGF76318.1| hypothetical protein BATDEDRAFT_14978 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 554

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 110/363 (30%), Gaps = 64/363 (17%)

Query: 122 KVNIEFVSANPTGPM-------------HVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
                FVS NP  P+             H+GH   A++ D+L     F G +       +
Sbjct: 3   TRLCSFVSTNPDHPVYITSPIFYVNAVPHIGHLYSAILADSLKRWFEFKGQKTMYSTGTD 62

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPE------------------GYYPGVYLKHVG 210
           + G +I   A +     ++   +                          +Y  V      
Sbjct: 63  EHGLKIQQAAEAAKSDPKEFCNDISKTFKSLFKKSDISYTRFIRTTDSDHYEAVKALWEC 122

Query: 211 KE----LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
            E    L   Y        +E + P  +  +  A   I+   +   + +   +  E+++ 
Sbjct: 123 LERGGFLYKGYHEGWYCVSDETFYPESQIEASAADPSIMVCHISKESGKVVEWTKEENYK 182

Query: 267 RGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGD 318
               +     I+ L    +  V E       S+  +    D      RS       +  D
Sbjct: 183 FKLSAFRDKTIEWLKANPKVIVPESQYNFVLSQLKKGEQTDLSVSRLRSRISWGIPVPND 242

Query: 319 DVDRPLLKSDGSYTYFA---------ADLAYFKCKYERGFDNMIYVMGSD----HSGYVK 365
           D     +  D    Y            D+   +   + G+   I+V+G D    H+ Y  
Sbjct: 243 DTHVIYVWLDALVNYLTVAKYPWTPSKDVQMSEIAAQNGWPAHIHVVGKDIIKFHAIY-- 300

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
              A   A      Q  +     +         KMSK  G+ +    ++++ G D VR+ 
Sbjct: 301 -WPAFLMAAGLPLPQKIISHGHWLM-----NHQKMSKSVGNVVEPNALIEKWGVDPVRYF 354

Query: 426 MLW 428
           ++ 
Sbjct: 355 LMR 357


>gi|298243616|ref|ZP_06967423.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556670|gb|EFH90534.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 900

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 71/253 (28%), Gaps = 33/253 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +          G  +      +     I     N TG +H+GH   + V D L    
Sbjct: 15  PQAVEAKWYRFWEEGGYFKPRPNPERKPFVISMPPPNVTGALHLGHGITSTVEDIL---- 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                        RY + L +    +P   + G+  + V + L 
Sbjct: 71  ----------------------------IRYHRMLGDETLWVPGEDHAGIATQTVVERLI 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K  ++      E +L  V  +  Q     I+D  + L    D          G    +R
Sbjct: 103 AKEGTDRHKLGREAFLERVWQWVHQY-KGRIQDQHRRLGASCDWSRERFTLDEGLSHAVR 161

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           ++  +L  +G +Y G               D +     +      V  PL   +G     
Sbjct: 162 EVFVSLYEEGLIYRGERIINWCPRCMSALSDLEVNHVDTPGKLTYVRYPLKPVEGESETR 221

Query: 335 AADLAYFKCKYER 347
              ++    + E 
Sbjct: 222 TRYISVATTRPET 234



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 14/143 (9%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            E G+D +I+   +        + A    +         L      L RD    KMSK  
Sbjct: 493 METGYD-IIFFWVAR------MVMAGIHFMGTVPFSTIYLHG----LVRDAKGEKMSKSK 541

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
            + I    V+D+ G+D++RF +           D   ++E+   N  F  +   A    +
Sbjct: 542 NNVIDPLEVMDKFGTDALRFTLATSSTPGN---DMKLIEERIVGNRNFANKIWNASRFVL 598

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQ 487
              A+      D        +  
Sbjct: 599 MSTAEVGGGVPDISAVKPRTLAD 621


>gi|94988916|ref|YP_597017.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992808|ref|YP_600907.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542424|gb|ABF32473.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546316|gb|ABF36363.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|295112120|emb|CBL28870.1| valyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 883

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  + +   +  +    +           +I     N TG +H+GH       D L   
Sbjct: 12  SPDAIEEKWYAFWLEKGLFNAEPDASKEAFSIVIPPPNVTGSLHMGHAFNNTFQDILCRT 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                    SV W            LP   + G+  ++V ++ 
Sbjct: 72  KRMQGY--------------------SVLW------------LPGTDHAGIATQNVVEKD 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   E ++  V ++      +II+  +K L    D       F  G    +
Sbjct: 100 LAKKGLTRHDLGREAFVKKVWEWKEVYGDRIIKQ-MKRLGNSCDWRRERFTFDEGLSRAV 158

Query: 274 RDIIDNLARQGYVYEGIL 291
           R +   L ++  +Y+G  
Sbjct: 159 RAVFVRLYKKDLIYKGKY 176


>gi|157363628|ref|YP_001470395.1| glutamyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|229470577|sp|A8F597|SYE1_THELT RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|157314232|gb|ABV33331.1| glutamyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 470

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 104/295 (35%), Gaps = 44/295 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R       G     L  ++ 
Sbjct: 7   APSPTGYLHVGGARTALFNYLFAKHHGGKFILRIEDTDIARS-----EGIFEENLMKTLQ 61

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G   G Y +     + ++Y+ +L+           + ++    +
Sbjct: 62  WLGLNWDEGPD----IGGSFGPYRQSERLNIYEEYAKKLIALD-----KAYEVFAYPEEI 112

Query: 243 KIIRDDL--KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + IR+ L  K L   +D  I E       P   ++       +G     I      K   
Sbjct: 113 EEIREKLLSKGLTPHYDRTIFE-------PFATKERKREYEEKGL-KPAIYFSMPRKAFI 164

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ +  + F    VGD     +L+S+G  TY   + A           ++I   G DH
Sbjct: 165 HNDLVKGTVQFSEGSVGDF---AILRSNGIPTY---NFACVVDDMLMQITHVIR--GDDH 216

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                +  A+  A S +  +I  +      L  DG   K+SKR G   ++  + +
Sbjct: 217 LPNTVKQLALYEAFSARPPEIGHVS---TILGPDGK--KLSKRHG-ATSIEELRE 265


>gi|15675460|ref|NP_269634.1| valyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533485|sp|Q99YS1|SYV_STRP1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13622652|gb|AAK34355.1| putative valine-tRNA ligase [Streptococcus pyogenes M1 GAS]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|295401943|ref|ZP_06811906.1| glutamyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109238|ref|YP_003987554.1| glutamyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294976073|gb|EFG51688.1| glutamyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214339|gb|ADP72943.1| glutamyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 486

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 105/298 (35%), Gaps = 41/298 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R        +Q+  L     
Sbjct: 10  APSPTGHLHIGGARTALFNYLFARHHNGKFIVRIEDTDIER-NVEGGEQSQLENLKWL-- 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++S   +G Y G Y +    ++  KY +ELL           K +     +
Sbjct: 67  -----GIDYDESVDKDGGY-GPYRQTERLDIYRKYVNELLEKG-----YAYKCFCTPEEL 115

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R+  +A  I    +  +           ++ I  L  +G  Y   +  P+ K  +  
Sbjct: 116 EQEREAQRAAGIAAPQYSGKC------RHLTKEQIAQLEAEGKPYTIRVKVPEGKVYEFE 169

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D+ R ++ F S  +GD     ++K++G  TY FA  +     K    F       G +H 
Sbjct: 170 DIVRGKVTFESKDIGDW---VIMKANGIPTYNFAVVIDDHLMKITHVFR------GEEHL 220

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +   +      +  Q        + L  +    K+SKR    I       E+G 
Sbjct: 221 SNTPKQLMIYDYFGWEPPQFGH-----LTLIVNENRKKLSKRDESIIQFVSQYKELGY 273


>gi|229828787|ref|ZP_04454856.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM
           14600]
 gi|229793381|gb|EEP29495.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM
           14600]
          Length = 657

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 59/387 (15%), Positives = 118/387 (30%), Gaps = 67/387 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    ++ D +A      GY+V      ++ G +I   A   
Sbjct: 10  TTAIAYTSGKP----HIGNTYEIILADAIARFRRQEGYDVFFMTGSDEHGQKIQIKAEEA 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +  N  ++         +  +     DK+        E +   I K    Q  
Sbjct: 66  GISPKELVDRNSGEI-------RRIWDLMDTSYDKFMRTTDADHEAQVQKIFKKLYDQG- 117

Query: 242 MKIIRDDLKALNIQHDIFI---------------------SEDDFHRGDPSPIRDIIDNL 280
             I +   +      D                        SE+ +          +I+++
Sbjct: 118 -DIYKGTYEGWYCTSDEAFWTDSQLVDGRCPDCGRPVTRASEEAYFFRMSKYADRLIEHI 176

Query: 281 A----------RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                      R+  +    L P      Q   + R    +   +  D      +  D  
Sbjct: 177 KSHPEFIQPVSRKNEMMNNFLLP----GLQDLCVSRTSFSWGIPVTFDPKHVVYVWLDAL 232

Query: 331 YTYFAADLAY-----FKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQI 381
             Y    + Y        +Y++ +   ++++G D    H+ Y         A+ +   + 
Sbjct: 233 TNYITG-IGYDCDGNHSDRYKKYWPADLHLIGKDIIRFHTIY---WPIFLMALGQPLPK- 287

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFC 440
             +      L  DG   KMSK  G+ I    +VD  G D+VR+ +L            + 
Sbjct: 288 -QVFGHPWLLQADG---KMSKSRGNVIYADDLVDIFGVDAVRYFVLHEMPFENDGVISWE 343

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ 467
            + E+   +    +     R  S+  +
Sbjct: 344 LMAERVNSDLANTMGNLVNRTISMANK 370


>gi|209559725|ref|YP_002286197.1| valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540926|gb|ACI61502.1| Valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|160894055|ref|ZP_02074834.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50]
 gi|156864433|gb|EDO57864.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50]
          Length = 923

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 67/245 (27%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 50  TYNPADIEDRLYRKWEDKKYFHAEVDRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILI 109

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A++   +  + L     D  E             
Sbjct: 110 RFKRMQGYSAL-------WQPGTDHAAIATEVKVTEKLKAEGIDKKEIGREA--FLQHAW 160

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  ++Y   ++N                         LK L    D          G   
Sbjct: 161 KWKEEYGGRIVNQ------------------------LKKLGSSADWDRERFTMDEGCSE 196

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++  NL  +GY+Y+G          +    D +            ++ P++  +G Y
Sbjct: 197 AVKEVFVNLYEKGYIYKGSRIINWCPVCKTSISDAEVEHVEQEGHFWHINYPIVGEEGRY 256

Query: 332 TYFAA 336
              A 
Sbjct: 257 VEIAT 261


>gi|94990882|ref|YP_598982.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544390|gb|ABF34438.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|56807922|ref|ZP_00365746.1| COG0525: Valyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|306826992|ref|ZP_07460290.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430738|gb|EFM33749.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|311113865|ref|YP_003985087.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945359|gb|ADP41653.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 515

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 70/442 (15%), Positives = 136/442 (30%), Gaps = 69/442 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + + NP    H+GH    +  D LA      G++V      ++ G ++ T A   
Sbjct: 9   TTAISYPNGNP----HIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQ 64

Query: 182 FWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPI---- 232
               ++    N +            Y + +     D Y +         E   + +    
Sbjct: 65  GKTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYA 124

Query: 233 ----VKDYSVQAMMKIIRDDLKALNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               V+D +  A  +    D +   I       +  E+ +          +++    +GY
Sbjct: 125 GWYSVRDEAYYAEDETEERDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLELYKNEGY 184

Query: 286 VY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           V+       L            + R    +   + G+D     +  D    Y    L Y 
Sbjct: 185 VFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTG-LGY- 242

Query: 342 KCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--LLCELVRLYRDG 395
                  F       ++++G D    + R  ++        A + +   +     L  +G
Sbjct: 243 PNTDGELFTKYWPADLHLIGKD----ITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNG 298

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +    +V   G D VRF ++        +  F +    S+E+ +    
Sbjct: 299 E--KMSKSVGNVVDPADLVAAFGLDQVRFFLMR-------EVSFGQDGSYSEESII---- 345

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENA 512
               R  S               +  +N    +P   EF  ++ +          ++  A
Sbjct: 346 ---NRINSDLANNLGNLAQRSLSMVAKNCDGRVPTPGEFTEADRK----------ILAGA 392

Query: 513 TIAQEPYKLAFYLYDLASVFHG 534
           +   EP + A Y       FH 
Sbjct: 393 SALYEPVR-ADYDE---QAFHR 410


>gi|238019596|ref|ZP_04600022.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748]
 gi|237863794|gb|EEP65084.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748]
          Length = 648

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 119/338 (35%), Gaps = 64/338 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + L   E++   +V++   +A  K  I + + 
Sbjct: 69  TPLEYTTNIVNGFKALWEKMHIS---NDDFLRTTEKRHEKVVQELFTKAYEKGDIYKAEY 125

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +       + F +E     G+     D    ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPCETFWTEQKL--GENHTCPDCGRPVEKVKEESYFFKLAKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V + L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRCNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPIPLIDTYGADSLRYYLLSE 330


>gi|71903958|ref|YP_280761.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|90108441|sp|Q48SA4|SYV_STRPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71803053|gb|AAX72406.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|167038739|ref|YP_001661724.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913676|ref|ZP_07130993.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723309|ref|YP_003903060.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166852979|gb|ABY91388.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890361|gb|EFK85506.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580370|gb|ADN53769.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 632

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 106/327 (32%), Gaps = 43/327 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A       ++ +  
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAREKGMSPKEYVDG 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               + +       L  +     D++      + EE    I     +     I +   + 
Sbjct: 74  IVEWIKD-------LWKIMDISYDQFIRTTDKYHEEIVQKIF--TKLYEKGDIYKSKYEG 124

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        ++ +  +GY +       +         D  Q  
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEHPDFIQPE 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-------------G 357
            R   + +      +KS     + +     +  K      ++IYV               
Sbjct: 185 SRRNEMINF-----IKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYS 239

Query: 358 SDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSK 402
           +DH    K+   A    V ++  + + ++   + +  D                  KMSK
Sbjct: 240 TDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSK 299

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +  + +V + G D+VR+ +L  
Sbjct: 300 SKGNVVDPKELVSKYGVDAVRYFLLRE 326


>gi|113461402|ref|YP_719471.1| valyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823445|gb|ABI25534.1| valyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 948

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L     S   +  +         I     N TG +H+GH    ++ DTL 
Sbjct: 4   RFNPSAVEQALYQHWESQGYFKPSEDVNAPSYCIAIPPPNVTGSLHMGHAFQQILMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|58337105|ref|YP_193690.1| valyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311486|sp|Q5FKW5|SYV_LACAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58254422|gb|AAV42659.1| valine-tRNA ligase [Lactobacillus acidophilus NCFM]
          Length = 879

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMEGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     L +  D         +G    +
Sbjct: 98  -RKQGKDRHEMGREAFVKQVWDWK-DEYANIIKSQWSKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G        T +    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPTLETALSD 187



 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 99/305 (32%), Gaps = 49/305 (16%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + + R   +ND G               +       DL E  Y  + ++ +   +     
Sbjct: 289 HNLKRINVMNDDGTMNEEAGKYAGMDRFECREALVKDLKEEGYL-IKVEPIVHSVGHSER 347

Query: 219 SELLNFPE--EKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           S +   P   ++W   +K            +  V  + +     L         ++    
Sbjct: 348 SGVQVEPRLSKQWFVKMKPLADKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQ 407

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD---RKQLLFRSTMVGDDVD 321
              G    I    +    + YV E      ++       +D      L   STM   D D
Sbjct: 408 LWWGH--RIPAWYNKKTGETYVGEEAPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDTD 465

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKK 378
            P  K      YF  +          G+D +I+   S     S +  +          ++
Sbjct: 466 NPDFKR-----YFPTNA------LVTGYD-IIFFWVSRMIFQSLHFTK----------ER 503

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDF 437
              +V+L  L+   RD    KMSK  G+ I    V+D+ G+D++R+ +L      +   F
Sbjct: 504 PFKDVVLHGLI---RDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRF 560

Query: 438 DFCKV 442
            + K+
Sbjct: 561 SYTKM 565


>gi|139436891|ref|ZP_01771051.1| Hypothetical protein COLAER_00022 [Collinsella aerofaciens ATCC
           25986]
 gi|133776538|gb|EBA40358.1| Hypothetical protein COLAER_00022 [Collinsella aerofaciens ATCC
           25986]
          Length = 491

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 96/291 (32%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + TR     D   QI        
Sbjct: 10  APSPTGKLHIGGARTAIYNWAFARANGGTFILRIDDTDPTRST---DENTQI-------I 59

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R  + L  +  + PE G   G Y +    +L  + + +L +          K Y     
Sbjct: 60  LRAMRWLGLDWDEGPEVGGDFGPYAQTERLDLYKQAAQKLWDEG--------KAYPCFCT 111

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + +  D KA   + D F     + R       +        G  Y   +  P+ +    
Sbjct: 112 KEQLDADRKAAQERKDPFQG---YQRRCRDLDPEEARRRIEAGESYVLRIKVPEDRGDVV 168

Query: 302 C-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D    ++ F +  + D     + +SDG+ TY   + A           ++I   G DH
Sbjct: 169 IHDAVHGEVTFDAKELDDF---VIFRSDGTPTY---NFATVVDDAMMKITHVIR--GDDH 220

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   V  A+         +    + L  DG   K+SKR G      
Sbjct: 221 LSNTPRQVMVYEALGAPVPTFAHIS---MILGADGK--KLSKRHGATSVEE 266


>gi|295109458|emb|CBL23411.1| valyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 884

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 71/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKGLEDRLYQKWMDNGYFHAKVNPDKKPFTIVMPPPNVTGQLHMGHALDETMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D          +  + K
Sbjct: 68  RFKRMQGY---------------------------EALWQPGTDHAAIATEVKVIDKLKK 100

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK+     +   E++L     +  +   KII   LK L    D          G   
Sbjct: 101 EGIDKH-----DIGREEFLKHAWAWKEEYGGKIINQ-LKKLGASADWERERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D +            ++ P+   +G +
Sbjct: 155 AVQEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPIAGEEGRF 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219


>gi|291536702|emb|CBL09814.1| valyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 887

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 97/333 (29%), Gaps = 64/333 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 12  TYDPKSIEDRLYKKWEDNGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILT 71

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+   +D          ++++ K
Sbjct: 72  RYKRMQGYN---------------------------ALWQPGTDHASIATEVKVIENLKK 104

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  DK      +   E +L    ++  +   +II   LK +    D         +G   
Sbjct: 105 QGIDK-----RDLGREGFLEKCWEWRDEYGSRIINQ-LKKMGSSADWERERFTMDKGCSE 158

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +G +Y+G          +    D +            ++ P++  +G +
Sbjct: 159 AVLEVFVKLYEKGLIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEEGRF 218

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
              A        + E  F +                   A AV+    +   ++ ++++L
Sbjct: 219 VEIAT------TRPETLFGD------------------TAVAVNPDDDRYKDIVGKMLKL 254

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
                   M+ R    I   +V  E G+  V+ 
Sbjct: 255 P-------MTDREIPVIADAYVDKEFGTGCVKI 280


>gi|163942206|ref|YP_001647090.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864403|gb|ABY45462.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 881

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYKWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G  + +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSNAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +  +Y G         T+    D
Sbjct: 160 NKVFVQLYEKDLIYRGEYIINWDPATRTALSD 191



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|227903677|ref|ZP_04021482.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868564|gb|EEJ75985.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 879

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMEGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     L +  D         +G    +
Sbjct: 98  -RKQGKDRHEMGREAFVKQVWDWK-DEYANIIKSQWSKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G        T +    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPTLETALSD 187



 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 99/305 (32%), Gaps = 49/305 (16%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + + R   +ND G               +       DL E  Y  + ++ +   +     
Sbjct: 289 HNLKRINVMNDDGTMNEEAGKYAGMDRFECREALVKDLKEEGYL-IKVEPIVHSVGHSER 347

Query: 219 SELLNFPE--EKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           S +   P   ++W   +K            +  V  + +     L         ++    
Sbjct: 348 SGVQVEPRLSKQWFVKMKPLADKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQ 407

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD---RKQLLFRSTMVGDDVD 321
              G    I    +    + YV E      ++       +D      L   STM   D D
Sbjct: 408 LWWGH--RIPAWYNKKTGETYVGEEAPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDTD 465

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKK 378
            P  K      YF  +          G+D +I+   S     S +  +          ++
Sbjct: 466 NPDFKR-----YFPTNA------LVTGYD-IIFFWVSRMIFQSLHFTK----------ER 503

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDF 437
              +V+L  L+   RD    KMSK  G+ I    V+D+ G+D++R+ +L      +   F
Sbjct: 504 PFKDVVLHGLI---RDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRF 560

Query: 438 DFCKV 442
            + K+
Sbjct: 561 SYTKM 565


>gi|237785946|ref|YP_002906651.1| valyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758858|gb|ACR18108.1| Valyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 933

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 43/242 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K L    V+   +  +        +I     N TG +H+GH     + D LA  
Sbjct: 41  NPADVEKKLDESWVNKGYFTADASSSKPSYSIVLPPPNVTGQLHMGHALDHTIMDALARQ 100

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-E 212
               GYEV            ++   ++   + +  L   +         G      G+ E
Sbjct: 101 KRMQGYEVL-------WLPGMDHAGIATQTKVEALLKETE---------GKDRFDYGREE 144

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             DK  S   ++ E                  I + ++AL    D          G    
Sbjct: 145 FVDKVWSWKKDYAER-----------------IGNQMRALGDSLDWSRERFTLDEGLSRA 187

Query: 273 IRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRP 323
           ++ +   L  QG +Y           L    S        D  +L+  R   + DD    
Sbjct: 188 VQTMFKKLYDQGLIYRANRMVNWSPKLETAISDIEVVYSDDEGELVSIRYGSLNDDEPHV 247

Query: 324 LL 325
           ++
Sbjct: 248 IV 249


>gi|329116061|ref|ZP_08244778.1| glutamate--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906466|gb|EGE53380.1| glutamate--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 481

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 100/293 (34%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    EL  KY  +LL           K Y  +
Sbjct: 57  RSQLENLKWLGMDWDESPETH--ENYRQSERLELYQKYIDQLLADG-----KAYKSYVTE 109

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R+  +A   +   +I+E  F         D I      G +    L   ++   
Sbjct: 110 EELATERERQEAAG-ETPRYINE--FIGMSADQKADYIAEREAAGIIPTVRLAVNEAGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           Q  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 QWTDMVKGDISFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   +  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMIYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|313230749|emb|CBY08147.1| unnamed protein product [Oikopleura dioica]
          Length = 333

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 99/364 (27%), Gaps = 73/364 (20%)

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R   +   +    +  E D    D S I  ++ N        E +    K         
Sbjct: 6   YRKQYELFGVNFHHWERESDVS--DASSILKLLQNAGNNFAKDEDVQLELKKFNPSWALG 63

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
             K    +++           K      Y                D++ Y+       + 
Sbjct: 64  KNKNSRKKAS-----------KVQFHQLY--------------SADSLCYITDISQKDHF 98

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            +L +             +           G    MS RAG  ++L  V+DE        
Sbjct: 99  HKLCSALDYFGYTDIAAKIEFVGF------GKLEGMSTRAGTGLSLESVIDEAVELQAEM 152

Query: 425 MMLWRKN------------------------------SELLDFDFCKVKEQSKENPVFYV 454
           M    K                                   D  F        +N   Y+
Sbjct: 153 MEKHGKTTYARHNFDQLDGITKKKHAAWFVAASVFSSKRQKDLKFNWQLHLKNDN-GMYL 211

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           Q  Y++ +++  + +    +   D    +    ES ++    +L+   A Y +  + A  
Sbjct: 212 QRIYSKIKNLLSKVESSRLEESVDDADFSSFIYESHWN----ELLQQSAAYSKARQKAID 267

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             + + L  +   L  + H            +++   +RK    R+ L   V  I+   L
Sbjct: 268 ELDGFILLQFGLRLGQLAHK-----VIFKDEKWILIEDRKSLHERIMLFDCVLMIVEDLL 322

Query: 575 NIIG 578
            ++G
Sbjct: 323 KLLG 326


>gi|293374654|ref|ZP_06620969.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646744|gb|EFF64739.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 655

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 102/336 (30%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  D +A      G++V            ++     +  + Q+A   
Sbjct: 15  PSGKFHIGTAYTTVASDAMARYKRSRGFDV-------HFLTGMDEHGQKIQEKAQEAGKE 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             + + E       L  +     D +        EE    I   +       I +   + 
Sbjct: 68  PQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENG--DIYKGHYEG 125

Query: 252 LNIQ--------------------HDIFISEDDFHRGDPSPIRDIIDN-----------L 280
           L                        D+ + +++ +  +     D +              
Sbjct: 126 LYCTPCESYYTETQLVDGKCPDCGRDVKVVKEESYFFNMKKYADRLMEYYNANPEFILPE 185

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           +R+  +    + P      +   + R    +   + GD      +  D    Y  A L Y
Sbjct: 186 SRKNEMVNNFIKP----GLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITA-LGY 240

Query: 341 FKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
                E  F+      ++V+G D    + R   +      ++        +      + +
Sbjct: 241 GSDNEEL-FNKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMK 295

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    +++  G D+VR+ +L  
Sbjct: 296 DG---KMSKSKGNVVYPEMLIERYGLDAVRYFLLRE 328


>gi|19746507|ref|NP_607643.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632599|sp|Q8P040|SYV_STRP8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19748714|gb|AAL98142.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDDSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|299144490|ref|ZP_07037569.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517578|gb|EFI41318.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 883

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 52/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    + L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPKEFEERLYKYWMDNNYFRAEVDSSKKPFTIVMPPPNVTGNLHMGHALNNTIQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  ++S   +  + + ++     +             
Sbjct: 67  RTKRMQGYSAL-------WLPGTDHASISTEAKVVEKIKSDGKS--KDELGREKFLEEAW 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  DKY                           I++ LK L +  D              
Sbjct: 118 KWTDKYG------------------------GNIKNQLKKLGVSCDWSRERFTLDDMLSH 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +G +Y G
Sbjct: 154 AVEEVFIRLYEKGLIYRG 171



 Score = 37.6 bits (86), Expect = 6.3,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 65/206 (31%), Gaps = 44/206 (21%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  +KD+ +   +         L + + +   E    R DP                  
Sbjct: 395 WLENIKDWCISRQLWWG----HRLPVFYCVETGEVVVSRTDP------------------ 432

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK--CKYE 346
               P     T K D D     F S +           S   +     DL YF       
Sbjct: 433 -TGSPGYENKTFKQDEDTLDTWFSSAL--------WPFSTLGWPEQTEDLKYFYPTDVLV 483

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +          +   +  V +A+ E   ++         L RD    KMSK  G+
Sbjct: 484 TGYDII----------FFWVIRMVFSAL-EDMGEVPFKDVFFTGLVRDSQGRKMSKSLGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS 432
            I    ++D  G+D++RF ++     
Sbjct: 533 GIDPLEIIDNYGADALRFTLISGNTP 558


>gi|229169200|ref|ZP_04296914.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614266|gb|EEK71377.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 881

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + + L    + G  +      K     I     N TG +H+GH     + D L   
Sbjct: 13  DHMSVEEGLYKWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRT 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L                        
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEGKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +     IR     + +  D          G  + +
Sbjct: 102 -REEGISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSNAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             +   L  +  +Y G         T+    D
Sbjct: 160 NKVFVQLYEKDLIYRGEYIINWDPATRTALSD 191



 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 478 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 527 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 574

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 575 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 628

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 629 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEVAKKTTRSILAY----VLDQ 680

Query: 573 GLNII 577
            + ++
Sbjct: 681 TMRLL 685


>gi|324993629|gb|EGC25548.1| valine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995059|gb|EGC26972.1| valine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 882

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|222152123|ref|YP_002561283.1| glutamyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121252|dbj|BAH18587.1| glutamyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 484

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 101/293 (34%), Gaps = 32/293 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A     +G +        D    +     S     Q  
Sbjct: 9   APSPTGFLHIGNARTALFNYLFAR---HNGGDFIIRIEDTDTARNVEGGEASQLKFLQWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRD 247
             + D  + +    G Y +    ++ +    +LL   +        ++   +   ++ R 
Sbjct: 66  GIDWDESIDKDGGFGPYRQSERADIYNPIIEKLLAEDKAYRCYMTAEELEAEREAQLARG 125

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++     +H     E++             + L  +G      +  PK K     DM + 
Sbjct: 126 EMPRYGGKHAHLTKEEE-------------EALIAEGRKPAIRIRVPKDKVYTFNDMVKG 172

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKR 366
           ++ F S  +GD     ++K DG  TY       F    +  F  + +V+ G DH     +
Sbjct: 173 EVSFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHFMEITHVIRGDDHISNTPK 223

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              V  A+  +      +      L  +    K+SKR G  I       ++G 
Sbjct: 224 QMMVYEALGYEIPTFGHM-----TLIVNEDRKKLSKRDGSIIQFIEQYHDLGY 271


>gi|145629516|ref|ZP_01785314.1| valyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144978359|gb|EDJ88123.1| valyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 573

 Score = 56.5 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|291521134|emb|CBK79427.1| methionyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 658

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 128/419 (30%), Gaps = 54/419 (12%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  I    A  +G  H+G+    V+ D++A      GY+V  +   ++ G +I   
Sbjct: 1   MAKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARFKRMQGYDVRFQTGTDEHGQKIEIK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       +Q + N    + E       +  +     DK+      + E++   I K   
Sbjct: 61  AGEAGITPKQFVDNVSGQIKE-------IWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLH 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD-PSPIRDIIDNLARQGYV--------- 286
            Q    I +   +       + F +E     G  P   R++ID      +          
Sbjct: 114 DQG--DIYKGYYEGKYCTPCESFFTESQLVDGKCPDCGREVIDAKEEAYFFKLSKYADRL 171

Query: 287 --YEGILPPPKSKTTQKCDMDRKQLL-----FRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
             Y    P      ++K +M    LL        +        P+   D    Y   D A
Sbjct: 172 IDYINTHPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWID-A 230

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---- 395
                   G+D    V G+    Y K   A    + +   + + +   ++ +  D     
Sbjct: 231 LSNYITGLGYD----VDGNSDELYKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPK 286

Query: 396 ----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
                        KMSK  G+ I    +V+  G D+VR+ +L            +  + E
Sbjct: 287 QVFGHPWLLVGDGKMSKSKGNVIYADDLVNYFGVDAVRYFVLHEMPFDNDGSITWELMVE 346

Query: 445 QSKENPVFYVQYAYARCRSIFRQ-------AKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           +   +    +     R  S+  +          +   +D DL    +   E      E 
Sbjct: 347 RMNSDLANILGNLVNRTISMNNKYFGGVISNPGVNEPVDDDLKAVALAMHEKVDAKMEK 405


>gi|300775296|ref|ZP_07085158.1| isoleucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506036|gb|EFK37172.1| isoleucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 1131

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 31/176 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+  AV +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 643 GVDQTRGWFYTLHAIGTAVFDSVAYKNVMSNGLV---LDKNGQKMSKRLGNAVDPFETLA 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
             G D+ R+ M+   N  E L FD   + E  ++          F+  YA     +   +
Sbjct: 700 VYGPDATRWYMISNANPWENLKFDIEGIDEVRRKFFGTLYNTYSFFALYANVDGFNYSEK 759

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +  P++D  +              SEL L++        ++      EP ++A 
Sbjct: 760 EVENRPEIDRWIL-------------SELNLLIK------EVKAFYEDYEPTRVAR 796


>gi|167038518|ref|YP_001666096.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116914|ref|YP_004187073.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166857352|gb|ABY95760.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319930005|gb|ADV80690.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 633

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 106/327 (32%), Gaps = 43/327 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A       ++ +  
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAREKGMSPKEYVDG 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               + +       L  +     D++      + EE    I     +     I +   + 
Sbjct: 74  IVEWIKD-------LWKIMDISYDQFIRTTDKYHEEIVQKIF--TKLYEKGDIYKSKYEG 124

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        ++ +  +GY +       +         D  Q  
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEHPDFIQPE 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-------------G 357
            R   + +      +KS     + +     +  K      ++IYV               
Sbjct: 185 SRRNEMINF-----IKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYS 239

Query: 358 SDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSK 402
           +DH    K+   A    V ++  + + ++   + +  D                  KMSK
Sbjct: 240 TDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSK 299

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +  + +V + G D+VR+ +L  
Sbjct: 300 SKGNVVDPKELVSKYGVDAVRYFLLRE 326


>gi|229062152|ref|ZP_04199476.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717135|gb|EEL68811.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 867

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYKWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G  + +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSNAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +  +Y G         T+    D
Sbjct: 151 QLYEKDLIYRGEYIINWDPATRTALSD 177



 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|332981108|ref|YP_004462549.1| methionyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332698786|gb|AEE95727.1| methionyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 512

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 113/335 (33%), Gaps = 58/335 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A       QQ + +
Sbjct: 16  PSDKLHIGHSYTTVAADAMARFKRMTGYDVWFLTGTDEHGEKIERVARQHNVTPQQYVDD 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
             S +               E  D    + +   + + + IV+     +     I + + 
Sbjct: 76  IVSWIKNL-----------WETMDISYDQFIRTTDPEHMKIVQTIFNRLYEQEDIYKGEY 124

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +       + F +E     G        ++ +  + Y ++      +     +   D  Q
Sbjct: 125 EGWYCTPCEAFWTELQLVNGKCPDCGRPVERVREEAYFFKLSKYQDRLIEYIETHPDFIQ 184

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM------ 356
              R   + ++  RP             DL   +  +  G    FD  ++IYV       
Sbjct: 185 PASRRNEMLNNFLRP----------GLEDLCVSRTSFSWGIPVTFDPKHVIYVWIDALSN 234

Query: 357 -----GS--DHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGM------------ 396
                G+  DH    ++   A    V ++  + + ++   + +                 
Sbjct: 235 YITALGAFTDHDEAFRKYWPADVHLVGKEIVRFHTIIWPAILMALGLELPKQVFGHGWLV 294

Query: 397 --PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V++ G D+VR+ +L  
Sbjct: 295 MDGGKMSKSKGNVIDPLKLVEQYGVDAVRYFLLRE 329


>gi|327266230|ref|XP_003217909.1| PREDICTED: DALR anticodon-binding domain-containing protein 3-like
           [Anolis carolinensis]
          Length = 471

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 32/187 (17%)

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYAYARCRSIF---RQ 467
            +V+ + + ++RF ML   +   +  D  +    +K      +V Y  AR  ++F   ++
Sbjct: 288 EIVNVLTAAAIRFEMLSINHQSQVLLDVEEASISTKGTKSGAFVMYNCARLATLFETYKR 347

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENA-------------T 513
           A++      F   P + +   S  +  E  L+ + +  +   ++                
Sbjct: 348 AEEQGLYPAF--PPPSELNYISLREEGEWLLLFNGVLPFQETLDRVIQLSLSDGGLRITA 405

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASII 570
             +    +  +L  L+  F  +++      R+  +      L      RLQL+ AV  + 
Sbjct: 406 NTEA---VCKFLIQLSMDFSSYYN------RVHILGEPRPHLFSQMFARLQLMRAVREVF 456

Query: 571 NSGLNII 577
           +S L  +
Sbjct: 457 HSALATL 463


>gi|134297944|ref|YP_001111440.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050644|gb|ABO48615.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 518

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 116/338 (34%), Gaps = 65/338 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DT+A     +GY+V      ++ G +I         R  +    
Sbjct: 17  PSDNLHIGHAYTTVAADTMARYKRLTGYDVWFLTGSDEHGQKIE--------RAAKNKNQ 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
              +  +    G        E  D   ++ +   +E+   +V+ +  Q      I + + 
Sbjct: 69  TPKEYVDHIVSGFKKL---WERLDVSYNDFIRTTDERHHKVVQKFFQQLFDQGDIYKSEY 125

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +       + F +E     G     +  ++ +  + Y +                    +
Sbjct: 126 EGWYCTPCETFFTEYQLAEGKCPDCQREVEKVREESYFFR--------------QSKYAE 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG----FD--NMIYVM-GS 358
              +      +  +P+ + +   ++      DL   +  ++ G    FD  +++YV   +
Sbjct: 172 RWLKFIEENPEFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIRVPFDPKHVVYVWVDA 231

Query: 359 -------------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D+S + K   A    +++   + + ++  ++ +  D           
Sbjct: 232 LTNYISALGYDTGDNSLFQKFWPADIHLMAKDIVRFHAIIWPILLMALDLPLPKKVIAHG 291

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ +    ++D+ G D+VR+ +L  
Sbjct: 292 WLLLDSGKMSKSKGNVVDPHVLIDKYGVDAVRYFLLRE 329


>gi|260892906|ref|YP_003239003.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865047|gb|ACX52153.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 916

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 71/188 (37%), Gaps = 28/188 (14%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + A A++ +     VL    V    D    KMSK  G+ +  +
Sbjct: 554 LYLEGSDQHRGWFNSSLSTAVAITGQPPYRAVLTHGFVV---DEEGRKMSKSLGNVVDPQ 610

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ ++G+D +R  +         D+          +N +  V  AY + R+ FR     
Sbjct: 611 EVMTKLGADILRLWVCSA------DYRGDLAAS---DNILRQVAEAYRKIRNTFRFLLAN 661

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D D    P   +P E   +     L++ L E  R +  A    E + +          
Sbjct: 662 LYDFD----PAEALPYEQLLELD-RYLLMRLEEVKRRVLKAYEEYEFHLV---------- 706

Query: 532 FHGHWSHG 539
           +H  +S  
Sbjct: 707 YHSIYSFC 714


>gi|313623634|gb|EFR93795.1| valyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 874

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 56/211 (26%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 7   PSNVEAGKYKWWLEKEFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 66

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +    +             E  
Sbjct: 67  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKEENISRYDLGR--EKFVDKTWEWK 117

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                          IR+  + L +  D          G    ++
Sbjct: 118 EEYAD------------------------FIREQWEKLGLGLDYSRERFTLDAGLSDAVK 153

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 154 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 184



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 18/165 (10%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G   P      ++ D D     F S +            +  Y +F      
Sbjct: 417 KETGEIYVGENEPENLDQWEQ-DEDVLDTWFSSALWPFSTMGWPDTENPDYKHFFP---- 471

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   S        +        E+  +  ++      L RD    KM
Sbjct: 472 -TNTLVTGYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDSEGRKM 519

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+ 
Sbjct: 520 SKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVES 564


>gi|319405909|emb|CBI79541.1| Valyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 907

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 68/215 (31%), Gaps = 46/215 (21%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D +       G  V  +  ++ AG     +            
Sbjct: 45  PNVTGSLHMGHALNTTIQDIIVRFQRMQGKNVLWQPGMDHAGIATQMV------------ 92

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V ++LA++          EK++  V  +  +A   II + L
Sbjct: 93  -------------------VERQLAERQEPARQEMGREKFIERVWKWRHEAG-GIITNQL 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG---------ILPPPKSKTTQ 300
           K L +  D          G    +R++   L +QG +Y+          +L        +
Sbjct: 133 KRLGVSCDWSRERFTMDEGLSQAVREVFVTLYKQGLIYKDKRLVNWDPKLLTAISDLEVE 192

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
             ++      FR  + G      +   D S T+  
Sbjct: 193 LKEVKGYLWYFRYPLEGK-----VFNPDDSTTFIT 222


>gi|294865903|ref|XP_002764513.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239864074|gb|EEQ97230.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 149

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 9/55 (16%)

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           S F   ++  +       V  ++++    RL L  A   ++    +I+ +     
Sbjct: 103 STFTAFYTECK-------VVGSDQE--RSRLLLCEATRRVLAQCFDILDITPLER 148


>gi|218291061|ref|ZP_03495093.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239015|gb|EED06221.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 650

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 104/327 (31%), Gaps = 39/327 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+GH    V  D +A      GY+V      ++ G +I   A        +A  +
Sbjct: 14  PNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAEQAGL-EPKAFLD 72

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII------ 245
                 +  +  + + +       +   E +     + L    D  +             
Sbjct: 73  PIIAWIQDLWRKLDISYDDFIRTTELRHERVVEQIFERLLQQGDIYLSEYQGWYCTPCES 132

Query: 246 -RDDLKALNIQHDIFISEDDFHRGDPS--PIRDIIDNLARQGYVYEGILPPPKSK----- 297
              + + +  +      E  F R +     +   +D L +      G + P   K     
Sbjct: 133 YWAERELVEGKCPQCGREVQFVREESYFFRMSKYVDRLLQYYEENPGFIEPVSRKTEMIK 192

Query: 298 -----TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF------KCKYE 346
                  Q   + R    +   +  +      +  D    Y +A + Y       + K+E
Sbjct: 193 NFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISA-IGYLSDDPNERAKFE 251

Query: 347 RGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           R +   ++V+G D    H+ Y      +  A+     +          L + G   KMSK
Sbjct: 252 RYWPADVHVVGKDIVRFHAVY---WPIILMALGLPLPKKVFGHGFF--LVKGG---KMSK 303

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ I    +VD  G D+ R+ +L  
Sbjct: 304 SKGNVIDPLSLVDRYGRDAFRYFLLRE 330


>gi|326803842|ref|YP_004321660.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650187|gb|AEA00370.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 881

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 34/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +      +    +  N        ++     N TG +H+GH     + D +   
Sbjct: 11  NPNEVERGRYDQWLDEKVFEPNGDTSVEAYSVVIPPPNVTGKLHLGHAWDVTLQDMIVRQ 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + ++ L   ++ L               E 
Sbjct: 71  KRMQGYDTL-------WLPGMDHAGIATQAKVEEKLRKEEN-LSRYDLGREKFIDKTWEW 122

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y+                          IR+    + I  D          G    +
Sbjct: 123 KEEYAQT------------------------IRNQWAKMGISVDYKRERFTLDDGLSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          Q    D + +          ++ PL  +DGS
Sbjct: 159 RKVFVTLYEKGLIYRGEYIINWDPVFQTALSDIEVVYKDDKGAFYHLEYPL--ADGS 213


>gi|229013673|ref|ZP_04170802.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135303|ref|ZP_04264098.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648172|gb|EEL04212.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747595|gb|EEL97469.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 867

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    + G  +      K     I     N TG +H+GH     + D L       G
Sbjct: 4   EEGLYKWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V            ++   ++   + +  L                          +  
Sbjct: 64  YDVL-------WLPGMDHAGIATQAKVEGKL-------------------------REEG 91

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    ++  +     IR     + +  D          G  + +  +  
Sbjct: 92  ISRYDLGREKFLEKAWEWK-EEYASHIRQQWGKVGLGLDYSRERFTLDEGLSNAVNKVFV 150

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L  +  +Y G         T+    D
Sbjct: 151 QLYEKDLIYRGEYIINWDPATRTALSD 177



 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+   S        +        E+  + +VL+  LV   RD    K
Sbjct: 464 YSTDALVTGYD-IIFFWVSR------MIFQGLEFTGERPFK-DVLIHGLV---RDEQGRK 512

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ I    V+++ G+D++R+ +       + L F   KV+              +
Sbjct: 513 MSKSLGNGIDPMDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVES------------TW 560

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                I       F  ++ D      I    E   ++  ++  L      IE+ T   + 
Sbjct: 561 NFINKI--WNASRFVLMNMDDMKYEEIDLTGEKSVADKWILTRL---NETIESVTRNMD- 614

Query: 519 YKLAFYLYDLAS--VFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                Y +  A   +++  W        E  +L     +       R  L +    +++ 
Sbjct: 615 ----KYEFGEAGRSLYNFIWDDFCDWYIEMAKLPLYGEDEAAKKTTRSILAY----VLDQ 666

Query: 573 GLNII 577
            + ++
Sbjct: 667 TMRLL 671


>gi|225376843|ref|ZP_03754064.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM
           16841]
 gi|225211339|gb|EEG93693.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM
           16841]
          Length = 891

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 64/333 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 17  TYDPKGIEERLYKKWEDNGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+   +D          ++ + +
Sbjct: 77  RYKRMQGYN---------------------------ALWQPGTDHASIATEVKVIQSLKE 109

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  DK      +   E +L    ++  +   +II   LK +    D         +G   
Sbjct: 110 KGIDKA-----DLGREGFLEKCWEWREEYGNRIINQ-LKKMGSSADWQRERFTMDKGCSD 163

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          +    D +            ++ P++  +G +
Sbjct: 164 AVQEVFIKLYEKGYIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEEGRF 223

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
              A        + E  F +                   A AV+    +   ++ ++++L
Sbjct: 224 VEIAT------TRPETLFGD------------------TAVAVNPDDERYKDIVGKMLKL 259

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
                   M+ R    I   +V  E G+  V+ 
Sbjct: 260 P-------MTDREIPVIADPYVDKEFGTGCVKI 285



 Score = 37.2 bits (85), Expect = 8.4,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 14/145 (9%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+         ++ + +    +   KA  + +L     L 
Sbjct: 480 TEDLDYFYPNDVLVTGYD-IIFFW------VIRMIFSGYEQMG--KAPFHTVLFHG--LV 528

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V+D+ G+D++R  ++        D  F   + +S  N   
Sbjct: 529 RDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGN-DMRFYWERVESSRNFAN 587

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDF 477
            V  A          A+   P LD 
Sbjct: 588 KVWNASRFIMMNLEGAEIKTPALDE 612


>gi|135148|sp|P23920|SYM_BACST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|39989|emb|CAA40999.1| methionine--tRNA ligase [Geobacillus stearothermophilus]
          Length = 649

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 113/339 (33%), Gaps = 66/339 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYE----------------------VTREYYIND 169
           P+  +H+GH    V GD +A      GY+                      VT + Y++D
Sbjct: 15  PSDKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKAQEKGVTPQQYVDD 74

Query: 170 --AGAQ---------INTLALSVFWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADK 216
             AG Q          +    +   R+++ +    + L E    Y G Y           
Sbjct: 75  IVAGIQELWRKLDISYDDFIRTTQERHKKIVEKIFARLVEQGDIYLGEYEGWYCTPCESF 134

Query: 217 YSSELL---NFPEEKW-LPIVKDYSV-QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           Y+   L   N P+    +  VK+ S    M K +   L+      D    E   +    +
Sbjct: 135 YTERQLVDGNCPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEENPDFIQPESRKNEMINN 194

Query: 272 PIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            I+  +++LA     +  GI  P   K      +D       +   G D D    K    
Sbjct: 195 FIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITALGYGTDNDEKFRK---- 250

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y+ AD+     +  R     IY               +  A+     +   +      
Sbjct: 251 --YWPADVHLVGKEIVRFHT--IY------------WPIMLMALGLPLPKK--VFGHGWL 292

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           L +DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 293 LMKDG---KMSKSKGNVVDPVMIIDRYGLDALRYYLLRE 328


>gi|220907900|ref|YP_002483211.1| DALR anticodon-binding domain-containing protein [Cyanothece sp.
           PCC 7425]
 gi|219864511|gb|ACL44850.1| DALR anticodon binding domain protein [Cyanothece sp. PCC 7425]
          Length = 277

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 60/172 (34%), Gaps = 45/172 (26%)

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-----------------EF 491
              F VQYA+ARC S+ R A         D  P    P  S                   
Sbjct: 110 GIPFAVQYAHARCCSLLRLADRHQLLQLADPNPLTSPPLWSILSPDPFPWLTCNGQLPLL 169

Query: 492 DTSELQLIVHLAEYPRVIEN--------ATIAQEPYKLAFYLYDL------------ASV 531
             +E  L++HL E+P  + +        A    EP  L   +  L            +  
Sbjct: 170 HPAEWDLLIHLLEFPSELRSQRSQWQTHAW-TGEPTDLVISVTQLRTDQLWRQAQGWSER 228

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NIIGVESP 582
           F   + H R    L        +L  +RL L+    ++++  L +++GV +P
Sbjct: 229 FEDFYRHCRIFAELS------PELAQVRLGLLILTHALLHFYLRDLLGVAAP 274


>gi|308177197|ref|YP_003916603.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744660|emb|CBT75632.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 516

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 100/326 (30%), Gaps = 36/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    V  D +A      GY+V      ++ G ++   A  +     Q    
Sbjct: 17  PNGTPHIGHAYEVVATDVMARFKRLDGYDVFFMTGTDEHGQKMMQTAEKLEITPAQLAQR 76

Query: 192 NDSDLPE--GYYPGVYLKHVGKELADKYSS--ELLNFPEEK----------WLPIVKDYS 237
           N              Y + +    AD +++  EL    E            W  +  +  
Sbjct: 77  NSDAFQSMNDELGTSYDRFIRTTDADHHAAAQELWRRMEANDDIYLDKYAGWYSVRDEAF 136

Query: 238 VQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                  +R+D     A       +  E+ +          ++D          G     
Sbjct: 137 YTEEQTEVREDGIRYAAETDTEVTWTEEESYFFRLSKYQDKLLDYYRDNPEF--GAPRSR 194

Query: 295 KSKTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTYFA----ADLAYFKC 343
            ++  +  +     L    T         G++     +  D    Y       D+     
Sbjct: 195 FNEVVRFVESGLTDLSISRTTFDWGIPVPGNEKHVMYVWVDALTNYLTGVGFPDVDSASF 254

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           K     D  ++V+G D    + R  A+        A++ +    ++  +     +KMSK 
Sbjct: 255 KKYWPAD--VHVIGKD----ISRFHAIYWPAFLMSAKLPLPKRVMIHGFLHNNGVKMSKS 308

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ ++    V+  G D VR+  L  
Sbjct: 309 LGNTVSPDDFVNRYGLDQVRYFFLRE 334


>gi|169350895|ref|ZP_02867833.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
 gi|169292481|gb|EDS74614.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
          Length = 460

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 103/315 (32%), Gaps = 42/315 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V D L     + GY+V       D   +I         +  +
Sbjct: 42  CGPTVYNYVHIGNTRPMIVFDVLRRTFEYLGYKVIFVSNFTDVDDKI--------IKAAK 93

Query: 188 ALYNNDSDLPEGYYPG-VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
               ++ +L + Y      ++     L   Y+  + N  E          ++ + +  + 
Sbjct: 94  QEGISEKELTDKYIKAYEDVRRDLNLLFPTYAPRVTNTME----------AIISFIDDLV 143

Query: 247 DDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
               A  +  D++       ++ +     I D++   + +             +  +K +
Sbjct: 144 KTGYAYEVDGDVYFRVSKIEEYGQLSGIKIEDLVAGASER-----------VDENNKKEE 192

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                L  + T  G   D P  K  G   +    +      ++ G    I + G      
Sbjct: 193 STDFALW-KKTDEGIRFDSPWSK--GRPGWHTECVVMINDIFQDGK---IDIHGGGQDLK 246

Query: 364 VKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               E  +A +++     I         +  D    KMSK  G+ I  + +++++G +  
Sbjct: 247 FPHHENEIAQSMACHHHPIAHTWMHNQMINID--NQKMSKSLGNVIWAKDMINDLGCNVY 304

Query: 423 RFMMLWRKNSELLDF 437
           ++ ML       L+ 
Sbjct: 305 KWFMLSSHYRNPLNL 319


>gi|71908659|ref|YP_286246.1| isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|84029513|sp|Q47BK5|SYI_DECAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71848280|gb|AAZ47776.1| Isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 932

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 81/245 (33%), Gaps = 35/245 (14%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYF-AADLAYFKCKYERG 348
               +   + +    +  F    + ++G + D+ +   D    +F +    +   +    
Sbjct: 499 ELIEQVALRVEKSGIEAWFSLDAAELLGAEADQYVKMKDTLDVWFDSGTTHWHVMRGSHA 558

Query: 349 FDNM----IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            D+     +Y+ GSD   G+ +       A+  +     +L    V    DG   KMSK 
Sbjct: 559 ADHTYPADLYLEGSDQHRGWFQSSLLSGCAIDGRAPYKGLLTHGFVV---DGKGHKMSKS 615

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I  + V D++G+D +R        S  L      +K   +          Y R R+
Sbjct: 616 KGNVIAPQQVSDKMGADILRLWTASTDYSGELTISDEILKRVVEG---------YRRIRN 666

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-----AEYPRVIENATIAQEP 518
             R       D D        I Q  E D   L L   L     A++           E 
Sbjct: 667 TLRFLLANVSDFDAATDMLP-IDQWLEIDRYALALTRELQDGCRADF--------DKYEF 717

Query: 519 YKLAF 523
           +++  
Sbjct: 718 HRVVQ 722


>gi|326336041|ref|ZP_08202217.1| glutamate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691838|gb|EGD33801.1| glutamate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 508

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 99/295 (33%), Gaps = 38/295 (12%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAG 171
            KV + F + +PTGP+H+G  R A+          GD L  +      +  +  Y+  A 
Sbjct: 3   KKVRVRF-APSPTGPLHIGGLRTALFNYLFAKKHGGDFLLRI-----EDTDQVRYVEGAE 56

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
             I          Y + +       P       Y +   K +  +Y+  LL+  +  +  
Sbjct: 57  DYIMEALAWCGITYDEGVGKGGEHAP-------YRQSERKAIYAEYAQMLLDKGDAYY-- 107

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +     +   R + +                    S   + +    ++G  Y    
Sbjct: 108 ---AFDTAEELDAQRKNYEQHGETFIYNWHNRQNLTNSFSLSPEEVKERLQRGDAYVVRF 164

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    D+ R +++  + ++    D+ L KSDG  TY    LA     +     +
Sbjct: 165 KMPQ-ETLTLHDLIRGEVVVDTKLLD---DKVLFKSDGMPTYH---LANIVDDHLMEITH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +I   G +    +     +  A      Q   L   L+         K+SKR GD
Sbjct: 218 VIR--GEEWLPSMALHVLMYRAFGWDAPQFAHL--PLILKPAGMGNGKLSKRDGD 268


>gi|238917941|ref|YP_002931458.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873301|gb|ACR73011.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 657

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 120/376 (31%), Gaps = 61/376 (16%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
             ++         I + S  P    H+G+    V+ D++A      GY+V  +   ++ G
Sbjct: 1   MPQSKGPFYMTTAIAYTSGKP----HIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHG 56

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            +I   A       ++ + N  +++         +  +     DK+     ++ E++   
Sbjct: 57  QKIELKAEEAGITPKEFVDNVSTEIK-------RIWDLMNTSYDKFIRTTDDYHEKQVQK 109

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           I K    Q    I +   + +     + F +E     G        +     + Y ++  
Sbjct: 110 IFKKLYDQG--DIYKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEEAYFFKMS 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-- 348
               K         +  Q + R   + ++   P             DL   +  ++ G  
Sbjct: 168 KYANKLIEHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIP 217

Query: 349 --FD--NMIYVM-------------GSDHS---GYVKRLEAVAAAVSEK--------KAQ 380
             FD  +++YV               +D +    Y K   A    + +            
Sbjct: 218 VDFDDKHVVYVWLDALTNYITGIGYDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPI 277

Query: 381 INVLLCELVRLYRDGMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SE 433
             + L E +     G P       KMSK  G+ I    +VD  G D+VR+ +L       
Sbjct: 278 FLMALGEPLPKQVFGHPWLLQNDGKMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFEN 337

Query: 434 LLDFDFCKVKEQSKEN 449
                +  + E+   +
Sbjct: 338 DGVISWELMVERMNSD 353


>gi|172056117|ref|YP_001812577.1| glutamyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229470616|sp|B1YGS7|SYE_EXIS2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|171988638|gb|ACB59560.1| glutamyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 481

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 102/293 (34%), Gaps = 32/293 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A     +G ++       D    I+   +    +Y + 
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR---HAGGKMILRIEDTDQKRNIDG-GVESQMKYLEW 64

Query: 189 LYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-KDYSVQAMMKIIR 246
           L  +  + P  G   G Y +    +L  KY+ ELL         +  ++   +   +I R
Sbjct: 65  LGIDWDEGPGRGGEYGPYFQMERLDLYKKYTDELLEKGLAYRCYMTSEELEAEREAQIAR 124

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            +    +  H     E +             +    +G      +  P+S T    D+ +
Sbjct: 125 GEAPRYSGAHRNLTQEQE-------------EAFVAEGRTPSIRIRVPESVTYTWNDIVK 171

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
           + + F S   GD     ++K DG  TY   + A     +     +++   G DH     +
Sbjct: 172 EDVSFESKDFGDW---VIVKKDGIPTY---NFAVVVDDHLMAISHVLR--GDDHISNTPK 223

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              +  A   +      +      L  +    K+SKR    I       ++G 
Sbjct: 224 QMMIYDAFGWEYPTFGHM-----TLIVNEEHKKLSKRDQSIIQYIEQYKDLGY 271


>gi|16800655|ref|NP_470923.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526882|sp|Q92BG2|SYV_LISIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16414074|emb|CAC96818.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 882

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 56/211 (26%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 15  PSNVEAGKYKWWLEKEFFKAEGNSDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +    +             E  
Sbjct: 75  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKEENISRYDLGR--EKFVDKTWEWK 125

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                          IR+  + L +  D          G    ++
Sbjct: 126 EEYAD------------------------FIREQWEKLGLGLDYSRERFTLDAGLSDAVK 161

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 162 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 192



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 18/165 (10%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G   P      ++ D D     F S +            +  Y +F      
Sbjct: 425 KETGEIYVGENEPENLDQWEQ-DEDVLDTWFSSALWPFSTMGWPDTENPDYKHFFP---- 479

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   S        +        E+  +  ++      L RD    KM
Sbjct: 480 -TNTLVTGYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDSEGRKM 527

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+ 
Sbjct: 528 SKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVES 572


>gi|295094145|emb|CBK83236.1| valyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 880

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 69/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYDPSQIEDRLYRKWEEKKYFHAEVDRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A++   +  + L     D  E      +LKH   
Sbjct: 67  RFKRMQGYSAL-------WQPGTDHAAIATEVKVTEKLKEQGIDKKEIG-REEFLKH-AW 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              ++Y + +++                         LK +    D          G   
Sbjct: 118 AWKEEYGNRIVSQ------------------------LKKMGSSADWDRERFTMDEGCSK 153

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          +    D + +          ++ P++   G +
Sbjct: 154 AVKEVFVRLYEKGYIYKGSRIINWCPVCKTSISDAEVIHEEQDGFFWHINYPVVGEPGRF 213

Query: 332 TYFAA 336
              A 
Sbjct: 214 VEIAT 218


>gi|313618762|gb|EFR90666.1| valyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 882

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 56/211 (26%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 15  PSNVEAGKYKWWLEKEFFKAEGNSDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +    +             E  
Sbjct: 75  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKEENISRYDLGR--EKFVDKTWEWK 125

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                          IR+  + L +  D          G    ++
Sbjct: 126 EEYAD------------------------FIREQWEKLGLGLDYSRERFTLDAGLSDAVK 161

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 162 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 192



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 18/165 (10%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G   P      ++ D D     F S +            +  Y +F      
Sbjct: 425 KETGEIYVGENEPENLDQWEQ-DEDVLDTWFSSALWPFSTMGWPDTENPDYKHFFP---- 479

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   S        +        E+  +  ++      L RD    KM
Sbjct: 480 -TNTLVTGYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDSEGRKM 527

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+ 
Sbjct: 528 SKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVES 572


>gi|327183314|gb|AEA31761.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 879

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYAAIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|256842870|ref|ZP_05548358.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262045836|ref|ZP_06018800.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381704|ref|ZP_06627685.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977611|ref|ZP_07789358.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256614290|gb|EEU19491.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260573795|gb|EEX30351.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921751|gb|EFD98772.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895350|gb|EFQ44417.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 879

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGNKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|261350960|ref|ZP_05976377.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860300|gb|EFC92598.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 448

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 115/338 (34%), Gaps = 45/338 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++N+           H+GH R  +  DT+     + GY V     I D   +I 
Sbjct: 15  ETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGYTVFYIQNITDVDDKII 74

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                          + ++ +P G         + ++   +Y  ++            + 
Sbjct: 75  K-------------RSKETGIPAG--------DIARKFEKRYIEDMNKLNVTGVNLFAR- 112

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +   M +II D ++ L  +   + +ED  + G        IDN    G +    +   +
Sbjct: 113 -ATDHMGEII-DQIQRLIDKGFAYETEDGVYFG--------IDNFEEFGKLSNRNIEELE 162

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS---DGSYTYFAADLAYFKCKYERGFDNM 352
           S         +  + F      ++VD P+  S   +G   +   D A  +  +   +D  
Sbjct: 163 SHREIAKTTKKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYD-- 220

Query: 353 IYVMGSDHSGYVKRLEA---VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             V G          EA      AVS K   +   L      + +    KMSK   +FIT
Sbjct: 221 --VHGGGLDLIFPHHEAEITQMEAVSGKSPMVRYWLHTG---FLNVSGEKMSKSLNNFIT 275

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +R ++ E  +D  RF +L       +DF    + +  K
Sbjct: 276 IRELLKEYDADVFRFFVLSTHYRSPIDFSKESLHQSEK 313


>gi|307265681|ref|ZP_07547234.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389218|ref|ZP_08210786.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919325|gb|EFN49546.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994581|gb|EGD53005.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 633

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 116/333 (34%), Gaps = 55/333 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A             
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR------------ 61

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRD 247
                P+ Y  G   ++K +  +  D  + + +   ++    IV+    +   K  I + 
Sbjct: 62  EKGMSPKEYVDGIVEWIKDL-WKTMDISNDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKS 120

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G        ++ +  +GY ++      +         D 
Sbjct: 121 EYEGWYCTPCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDF 180

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM-------- 356
            Q   R   + +      +KS     + +   + F    +  FD  ++IYV         
Sbjct: 181 IQPESRRNEMINF-----IKSGLEDLFVSR--SSFDWGIKVPFDPRHVIYVWIDALSNYI 233

Query: 357 -----GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------------GM 396
                 +DH    K+   A    V ++  + + ++   + +  D                
Sbjct: 234 TALGYSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILE 293

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             KMSK  G+ +  + +V + G D+VR+ +L  
Sbjct: 294 GGKMSKSKGNVVDPKELVRKYGVDAVRYFLLRE 326


>gi|284047776|ref|YP_003398115.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283951997|gb|ADB46800.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 884

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 44/270 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K   +       + + +       ++     N TG +H+GH     + D L   
Sbjct: 12  DPAAVEKKWYAYWTEKGFFHQPVDKSRKPFSVVIPPPNITGKLHMGHALDNTLQDILVRW 71

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               G         + AG   QI                                  V +
Sbjct: 72  HRMMGDNTCWLPGYDHAGLATQI---------------------------------KVEE 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           EL  K      +   E+++  V  +  +A    I   LK+L I  D          G   
Sbjct: 99  ELKKKEGLTRYDLGREEFVKRVWKWK-EAYGDEIVRQLKSLGISCDWDRQRFTMDEGLSR 157

Query: 272 PIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +R+   +L  +G +Y+G              S    +   D   L   +  +  + D+ 
Sbjct: 158 AVREAFVSLYEKGLIYKGTRMINWCVNCRTALSDVEVEHQDDAGALWHINYPIVGEKDQY 217

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           L  +         D A      +  +  ++
Sbjct: 218 LTIATSRPETIPGDTAVAVNPKDERYGKLV 247



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 21/144 (14%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +      K+   +V +  LV   RD    KMSK  G+
Sbjct: 488 TGYD-IIFFW-------VARMITMGEEFMGKEPFKHVFIHGLV---RDEQGRKMSKSLGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    VV++ G+D++RFM++        + F + +++                +  +  
Sbjct: 537 GIDPVEVVNQYGADTLRFMLITGNTPGNDMRFYWNRIESTRNF---------ANKIWNAS 587

Query: 466 RQAKDIFPDLDFDLFPRNVIPQES 489
           R A       D D     +   + 
Sbjct: 588 RFALMNLDGYDKDAEKAPLTLADK 611


>gi|227877308|ref|ZP_03995381.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256848756|ref|ZP_05554190.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|227863164|gb|EEJ70610.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256714295|gb|EEU29282.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 879

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGNKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|225012387|ref|ZP_03702823.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003364|gb|EEG41338.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 1127

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 103/266 (38%), Gaps = 43/266 (16%)

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
            SE DF   +   I         +  V + +L  PK +  Q+ + D   + F S  +   
Sbjct: 560 FSEGDFTESNYDSID------LHKNVVDQIVLCSPKGQPMQR-ESDLIDVWFDSGAMPY- 611

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVM-GSDH-SGYVKRLEAVAAAVS 375
                      + Y   +    K K + G D     Y+  G D   G+   L A+   V 
Sbjct: 612 ---------AQWHYPFEN----KEKIDAG-DRFPADYIAEGVDQTRGWFYTLHAIGTLVF 657

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-EL 434
            KKA  NV+   LV    D    KMSKR G+ +     +D+ G+D+ R+ M+   N  + 
Sbjct: 658 GKKAYKNVVSNGLV---LDKSGQKMSKRLGNAVDPFKTLDQYGADATRWYMISNANPWDN 714

Query: 435 LDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFD 492
           L FD   + E Q K     Y  Y++            ++ ++D FD      IP E+  +
Sbjct: 715 LKFDAEGIAEVQRKFFGTLYNTYSFFS----------LYANIDAFDPKKETPIPFENRTE 764

Query: 493 TSELQLIVHLAEYPRVIENATIAQEP 518
                ++  L    ++++ A    EP
Sbjct: 765 LDRW-ILSELHSLIQLVDAAYEDYEP 789


>gi|222444492|ref|ZP_03607007.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434057|gb|EEE41222.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
           DSM 2375]
          Length = 448

 Score = 56.1 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 115/338 (34%), Gaps = 45/338 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++N+           H+GH R  +  DT+     + GY V     I D   +I 
Sbjct: 15  ETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGYTVFYIQNITDVDDKII 74

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                          + ++ +P G         + ++   +Y  ++            + 
Sbjct: 75  K-------------RSKETGIPAG--------DIARKFEKRYIEDMNKLNVTGVNLFAR- 112

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +   M +II D ++ L  +   + +ED  + G        IDN    G +    +   +
Sbjct: 113 -ATDHMGEII-DQIQRLIDKGFAYETEDGVYFG--------IDNFEEFGKLSNRNIEELE 162

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS---DGSYTYFAADLAYFKCKYERGFDNM 352
           S         +  + F      ++VD P+  S   +G   +   D A  +  +   +D  
Sbjct: 163 SHREIAKTTKKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYD-- 220

Query: 353 IYVMGSDHSGYVKRLEA---VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             V G          EA      AVS K   +   L      + +    KMSK   +FIT
Sbjct: 221 --VHGGGLDLIFPHHEAEITQMEAVSGKSPMVRYWLHTG---FLNVSGEKMSKSLNNFIT 275

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           +R ++ E  +D  RF +L       +DF    + +  K
Sbjct: 276 IRELLKEYDADVFRFFVLSTHYRSPIDFSKESLHQSEK 313


>gi|325956486|ref|YP_004291898.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333051|gb|ADZ06959.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 879

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYAAIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|332703611|ref|ZP_08423699.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 485

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 114/364 (31%), Gaps = 49/364 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AVV D L   +  +G EVT      D   +I   A       Q+         
Sbjct: 36  HIGHARSAVVFDILVRYLRSTGLEVTFIRNFTDVDDKIINRANERGVSSQEIAEKYIKTF 95

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E       L+   +    ++  E+L    E                +I  D     +  
Sbjct: 96  HEDMDKLNVLRADIEPKCTEHIPEMLTLTGE----------------LIAKDRAYKTLSG 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        RD ID+L        G    P        D     L   +   
Sbjct: 140 DVYFRVRAFEPYGKLSGRD-IDDLRA------GARITPGEAKEDPLDF---ALWKSAKPN 189

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVS 375
               + P  K    +    + +A          D  + + G          E  +A   +
Sbjct: 190 EPFWESPWGKGRPGWHLECSAMAAKYV------DLPLDIHGGGQDLIFPHHENEIAQTEA 243

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               ++         +  +    KMSK  G+F T+R ++D+   + +RF +L +     L
Sbjct: 244 ATDGELARFWVHNGFVQIN--QEKMSKSLGNFFTIRDILDKFMPEVLRFFLLGQHYRSPL 301

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDT 493
           DF F  ++E  K              R I+     +   L  D + +  +P E   E  T
Sbjct: 302 DFSFESLEEAEKG------------LRRIYAAMGQMREALQKDKWGKAALPTEITDELST 349

Query: 494 SELQ 497
           +E  
Sbjct: 350 AEKA 353


>gi|295692675|ref|YP_003601285.1| valyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030781|emb|CBL50260.1| Valyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 879

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQTWLDEDLFKPSGNKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|300361442|ref|ZP_07057619.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354061|gb|EFJ69932.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 901

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMEGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYANIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          Q    D
Sbjct: 156 RKVFVQLYNEGLIYRGEYIINWDPELQTALSD 187



 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 88/289 (30%), Gaps = 46/289 (15%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL------------ 206
           + + R   +ND G               +A      DL +  Y                 
Sbjct: 289 HNLERINVMNDDGTMNEEAGKYAGMDRFEAREALVKDLKKEGYLIKVEPIVHSVGHSERS 348

Query: 207 -KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V   L+ ++  ++    EE       D  V  + +     L         ++     
Sbjct: 349 GVQVEPRLSKQWFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQL 408

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD---RKQLLFRSTMVGDDVDR 322
             G    I    +    + YV E      ++       +D      L   ST+   D D 
Sbjct: 409 WWGH--RIPAWYNKKTGETYVGEEAPKDIENWEQDPDVLDTWFSSALWPFSTLGWPDTDN 466

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKA 379
           P  K      YF             G+D +I+   S       +  +          K+ 
Sbjct: 467 PDFKR-----YFPT------NTLVTGYD-IIFFWVSRMIFQGLHFTK----------KRP 504

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             +V+L     L RD    KMSK  G+ +    VVD+ G+D++R+ +L 
Sbjct: 505 FKDVVLHG---LMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRWFLLN 550


>gi|135105|sp|P22249|SYE_BACST RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|143004|gb|AAA22494.1| transfer RNA-Gln synthetase [Geobacillus stearothermophilus]
          Length = 489

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 100/292 (34%), Gaps = 29/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D    +     S     Q  
Sbjct: 10  APSPTGHLHIGGARTALFNYLFAR---HHGGKMIVRIEDTDIERNVEGGEQSQLENLQWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  + +    G Y +    ++  KY  ELL           K +     ++  R++
Sbjct: 67  GIDYDESVDKDGGYGPYRQTERLDIYRKYVDELLEQG-----HAYKCFCTPEELEREREE 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A  I    +  +            + +  L  QG  Y   L  P+ KT +  D+ R +
Sbjct: 122 QRAAGIAAPQYSGKC------RRLTPEQVAELEAQGKPYTIRLKVPEGKTYEVDDLVRGK 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F S  +GD     ++K++G  TY FA  +     +    F       G +H     + 
Sbjct: 176 VTFESKDIGDW---VIVKANGIPTYNFAVVIDDHLMEISHVFR------GEEHLSNTPKQ 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V      +  Q        + L  +    K+SKR    I       E+G 
Sbjct: 227 LMVYEYFGWEPPQFAH-----LTLIVNEQRKKLSKRDESIIQFVSQYKELGY 273


>gi|332358258|gb|EGJ36086.1| valine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 882

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLEADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S              +++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------DRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|255530334|ref|YP_003090706.1| isoleucyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343318|gb|ACU02644.1| isoleucyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 1129

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 16/165 (9%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+ A V +K A  NV+   LV    D    KMSKR G+       ++
Sbjct: 639 GVDQTRGWFYTLHAIGALVFDKVAYKNVVSNGLV---LDKNGQKMSKRLGNAADPFKTLE 695

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           E G D+ R+ M+   N  + L FD   + E + K     Y  YA+         A     
Sbjct: 696 EYGPDATRWYMISNANPWDNLKFDIEGIAEIRRKFFGTLYNTYAFFALY-----ANIDKF 750

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           ++D D      + + SE D   L L+  L      ++ +  + EP
Sbjct: 751 EIDQDNLTP--VAERSELDRWILSLLQTLI---AEVDESYNSYEP 790


>gi|158423799|ref|YP_001525091.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158330688|dbj|BAF88173.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 526

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 102/343 (29%), Gaps = 31/343 (9%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +GR  +       I    A P G  H+GH   A+  D +A      GY+V      ++ G
Sbjct: 2   FGRVPMSSKRPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHG 61

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPE 226
            ++   A       ++ L  N                 +++   +       +       
Sbjct: 62  IKMLQTAQKAGLTPRELLDRNVPAFKAMGPAFNLSNDDFIRTTEERHIKSSQAIWERMAA 121

Query: 227 EKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRD 275
           +  +             +A        +   N++         ++ E+ +     +  + 
Sbjct: 122 KGDIYKSTYSGWYSVRDEAYYAEDETTVNEQNVRLGPQGTPVEWVEEESYFFRLSAYQQK 181

Query: 276 IIDNLARQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           ++D  A   G++        +    S   Q   + R    +   + GD      +  D  
Sbjct: 182 LLDFYAANPGFIMPEARRNEVVSFVSGGLQDLSISRTTFDWGIPVPGDPAHIMYVWVDAL 241

Query: 331 YTYFA----ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
             Y       D      +     D  ++V+G D    + R  AV        A +     
Sbjct: 242 TNYITALGYPDTDAELFRKFWPAD--LHVIGKD----IIRFHAVYWPAFLWSAGLEPPKR 295

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                +      KMSK  G+ +    +V+  G D+ R+  L  
Sbjct: 296 VFGHGFLFNRGEKMSKSVGNVVDPFGLVETYGVDATRYFFLRE 338


>gi|94987090|ref|YP_595023.1| valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731339|emb|CAJ54702.1| Valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 882

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 75/259 (28%), Gaps = 54/259 (20%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +  NL  KG    I     N TG +H+GH     + D L    
Sbjct: 12  PKDIETYWRDHWERNNTFTPNLNEKGEPFCIVIPPPNVTGILHIGHALNITLQDILCRHA 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +                    V W            +P   + G+  +HV + + 
Sbjct: 72  RQQGKK--------------------VLW------------IPGTDHAGIATQHVVERML 99

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K +        E ++  V  +  +     I + L+ +    D          G    +R
Sbjct: 100 AKENVSREQLGREAFIQKVWQWR-EKYGTHILEQLRRIGASVDWTRERFTMDDGLSQAVR 158

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +   L +QGY+Y+G               D               D    +++    Y 
Sbjct: 159 KVFVELYKQGYIYKGKYIVNWCTYCHTALSD---------------DEVEHRTEKGNLY- 202

Query: 335 AADLAYFKCKYERGFDNMI 353
                Y + K E G D++I
Sbjct: 203 -----YVRYKLEDGSDDLI 216


>gi|20806639|ref|NP_621810.1| methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|25009362|sp|Q8RDD1|SYM_THETN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|20515086|gb|AAM23414.1| Methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 638

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 113/329 (34%), Gaps = 47/329 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A        +   +
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRIARE-KGMSPKEYVD 72

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              +  +  +  + +        D +      + EE    I     +     I + + + 
Sbjct: 73  GIVEWIKDLWKTMDI------SYDHFIRTTDAYHEEIVQKIF--MKLYEQGDIYKGEYEG 124

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        ++ +  +GY +       K     +   D  Q  
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRPVERVTEEGYFFRLSAYGDKLLKYYEEHPDFIQPE 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLE 368
            R   + +      +K+     + +   + F    +  FD  ++IYV     S Y+  L 
Sbjct: 185 SRRNEMINF-----IKAGLEDLFVSR--STFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 369 AVA----AAVSEKKAQINVLLCELVR---------LYRDGMPI---------------KM 400
            +            A ++++  E+VR         L   G+P+               KM
Sbjct: 238 YMTENDEKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKKVFGHGWLILEGGKM 297

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           SK  G+ +  + +VD  G D++R+ +L  
Sbjct: 298 SKSKGNVVDPKELVDRYGVDAIRYFLLRE 326


>gi|219666137|ref|YP_002456572.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536397|gb|ACL18136.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 647

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 74/493 (15%), Positives = 144/493 (29%), Gaps = 94/493 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    H+G     V  D  A      G++V                        Q+ +  
Sbjct: 12  PNASPHIGTAYTTVAADAFARYHRLKGHDVY--------------FLTGTDENAQKIVRT 57

Query: 192 NDSD--LPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIR 246
            +S    P  Y  GV  +     E  D    + +   EE+   +VK     +     I +
Sbjct: 58  AESQGMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYK 117

Query: 247 DDLKALNIQ-HDIFISEDDFHRG---DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + +       + F +E+    G   +P   RD ++ L  + Y ++            K 
Sbjct: 118 SEYEGWYCTPCETFWTENKLMDGKCPNPDCGRD-VELLKEESYFFKLSKYQDALLRHIKD 176

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM 356
             D  Q   R   +   ++  L            DL   +  ++ G        +++YV 
Sbjct: 177 HPDFIQPASRRNEMIKFIEGGL-----------EDLCVSRTTFQWGIQVPFNPKHVVYVW 225

Query: 357 -GS-----------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---------- 394
             +           D   Y +   A    + +   + + ++  ++ +  D          
Sbjct: 226 LDALINYISALGYPDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGH 285

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                    K+SK  G+      ++   GSD++R+ +L                 Q   +
Sbjct: 286 GWYLSKEGGKISKSRGNVQDSFELIRRYGSDAIRYFLLRE--------------MQVGTD 331

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFDTSELQLIVHLAEYP 506
             +       R  S        F      +  +    VIP+ +E    E +L   L +  
Sbjct: 332 GAYSEDSLVERLNSDLANDLGNFVSRSLAMIVKYRGGVIPKAAEPTELEAEL-RALGQ-- 388

Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            V+       E +  A  L +L  +      +   +    +  A        RL     V
Sbjct: 389 EVVAKVEERLEAHDPAGALENLWRLVSR--MNKYVDETAPWTLAKQEG-QQARL---DTV 442

Query: 567 ASIINSGLNIIGV 579
                  + I+G+
Sbjct: 443 LHTFAEAIRILGI 455


>gi|254481195|ref|ZP_05094440.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038358|gb|EEB79020.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 922

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 35/246 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +         S   +      +   + I     N TG +H+GH     + D L 
Sbjct: 4   TFQPADIETRWYQEWESKGYFAPQGGDEAYSIMI--PPPNVTGSLHMGHGFQEAIMDALI 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GY    +   + AG     +                               V +
Sbjct: 62  RYHRMAGYNTLWQVGTDHAGIATQMV-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  K      +   E+++  V ++  ++   I R  L+ L    D          G  +
Sbjct: 91  QLEAK-GISRHDLGREEFIKKVWEWKEESGGTITRQ-LRRLGSSLDWSRERFTMDEGLSN 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++G +Y G               D + +           D PL+  +G  
Sbjct: 149 AVQEVFIRLYKEGLIYRGKRLVNWDPVLHTAISDLEVISEEEQGHLWHFDYPLVGGEGHL 208

Query: 332 TYFAAD 337
           T     
Sbjct: 209 TVATTR 214


>gi|315038034|ref|YP_004031602.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276167|gb|ADQ58807.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 879

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYAAIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.4 bits (88), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|227892642|ref|ZP_04010447.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865513|gb|EEJ72934.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 879

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYAAIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          Q    D
Sbjct: 156 KKVFVQLYNEGLIYRGEYIINWDPALQTALSD 187



 Score = 38.4 bits (88), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             K+   +V+L     L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMMFQSLHFT----------GKRPFNDVVLHG---LMRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VVD+ G+D++R+ +L      +   +D  K+ 
Sbjct: 526 LGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLS 566


>gi|312109184|ref|YP_003987500.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311214285|gb|ADP72889.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 648

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 109/368 (29%), Gaps = 124/368 (33%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V    Y+   G                    
Sbjct: 15  PSGNLHIGHAYTTVAGDAMARYKRLRGYDVM---YL--TGT------------------- 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK   +     V  ++  I++  K 
Sbjct: 51  -----------------------DEHGQKIQRKAEEKG--VTPQQYVDEIVAGIQELWKK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           L+I +D FI            +  I   L  QG +Y G                      
Sbjct: 86  LDISYDDFI--RTTQDRHKKVVEKIFARLVEQGDIYLGEYEGWYCTPCESFYTERQLVDG 143

Query: 296 ---SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------A 335
                      +  +   F+ +     VDR L   + +  +                   
Sbjct: 144 NCPDCGRPVEKVKEESYFFKMSKY---VDRLLQYYEENPEFIQPESRKNEMINNFIKPGL 200

Query: 336 ADLAYFKCKYERGF------DNMIYVM-------------GSDHSGYVKRLE-AVAAAVS 375
            DLA  +  ++ G        ++IYV              G+D     ++   A    V 
Sbjct: 201 EDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITALGYGTDDDEKFRKYWPADVHLVG 260

Query: 376 EKKAQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDS 421
           ++  + + +   ++ +  D                  KMSK  G+ +    ++D  G D+
Sbjct: 261 KEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDA 320

Query: 422 VRFMMLWR 429
           +R+ +L  
Sbjct: 321 LRYYLLRE 328


>gi|304405642|ref|ZP_07387301.1| glutamyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345681|gb|EFM11516.1| glutamyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 486

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 102/294 (34%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y Q
Sbjct: 10  APSPTGHLHIGNARTALFNYLYARSLG--GKFIIR---IEDTDVKRNVAGGEESQLKYLQ 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMMKII 245
            L  + D  +  G   G Y +    ++  +Y   LL+           ++   +   +  
Sbjct: 65  WLGIDWDESIDVGGGYGPYRQTERLDIYREYWQTLLDQGRAYRCYCTEEELEQEREEQTA 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +    + +H     E                    +G V        + KT +  DM 
Sbjct: 125 RGETPRYSGRHRELTEEQR-------------QAFEAEGRVPSIRFRVQEGKTYKFNDMV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S  +GD     ++K DG  TY   + A     Y     +++   G DH     
Sbjct: 172 KGEISFESEGMGDF---VIVKKDGIPTY---NFAVVIDDYLMRISHVLR--GEDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           R   +  A+  +  Q   +      L  +    K+SKR    I      D++G 
Sbjct: 224 RQLMIYEALGWEPPQFGHM-----TLIVNETRKKLSKRDESIIQFIEQYDQLGY 272


>gi|295401997|ref|ZP_06811959.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294975999|gb|EFG51615.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 648

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 109/368 (29%), Gaps = 124/368 (33%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V    Y+   G                    
Sbjct: 15  PSGNLHIGHAYTTVAGDAMARYKRLRGYDVM---YL--TGT------------------- 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK   +     V  ++  I++  K 
Sbjct: 51  -----------------------DEHGQKIQRKAEEKG--VTPQQYVDEIVAGIQELWKK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           L+I +D FI            +  I   L  QG +Y G                      
Sbjct: 86  LDISYDDFI--RTTQDRHKKVVEKIFARLVEQGDIYLGEYEGWYCTPCESFYTERQLVDG 143

Query: 296 ---SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------A 335
                      +  +   F+ +     VDR L   + +  +                   
Sbjct: 144 NCPDCGRPVEKVKEESYFFKMSKY---VDRLLQYYEENPEFIQPESRKNEMINNFIKPGL 200

Query: 336 ADLAYFKCKYERGF------DNMIYVM-------------GSDHSGYVKRLE-AVAAAVS 375
            DLA  +  ++ G        ++IYV              G+D     ++   A    V 
Sbjct: 201 EDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITALGYGTDDDEKFRKYWPADVHLVG 260

Query: 376 EKKAQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDS 421
           ++  + + +   ++ +  D                  KMSK  G+ +    ++D  G D+
Sbjct: 261 KEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDA 320

Query: 422 VRFMMLWR 429
           +R+ +L  
Sbjct: 321 LRYYLLRE 328


>gi|328953118|ref|YP_004370452.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453442|gb|AEB09271.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 886

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  + K       +   +  +        +I     N TG +H+GH     + D L   
Sbjct: 10  SPGEIEKKWYEYWEANFLFQADANSDRHPYSIVIPPPNITGSLHMGHALNNTLQDILCRC 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                             L+   +D        V  + +  E 
Sbjct: 70  KRMQGYNT---------------------------LWMPGTDHAGIATQNVVERMLAAEG 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+++     F E  W    K  S   ++      LK L    D          G  + +
Sbjct: 103 KDRHTVGREAFIERVWQ--WKKESGGHIINQ----LKRLGCSCDWSRERFTMDAGLSAAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L   G +Y+G
Sbjct: 157 REVFVRLYEDGLIYKG 172



 Score = 37.6 bits (86), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     ++     V +  LV   RD    KMSK  G+ +    V++E G+D+ 
Sbjct: 492 WVARMMMMGLYFMKEVPFREVYIHALV---RDAEGQKMSKSKGNVVDPLEVMEEYGTDAF 548

Query: 423 RFMM 426
           RF +
Sbjct: 549 RFSL 552


>gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47777767|ref|YP_016640.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183072|ref|YP_026324.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317498|ref|ZP_00390457.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|167635109|ref|ZP_02393426.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641535|ref|ZP_02399783.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688925|ref|ZP_02880127.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707587|ref|ZP_02898040.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655324|ref|ZP_02936853.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569007|ref|ZP_03021908.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|229600122|ref|YP_002864689.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254682335|ref|ZP_05146196.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724179|ref|ZP_05185964.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733574|ref|ZP_05191295.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744658|ref|ZP_05202337.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254762419|ref|ZP_05214261.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38258301|sp|Q81W03|SYM1_BACAN RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|30253549|gb|AAP24091.1| methionine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47551472|gb|AAT29115.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176999|gb|AAT52375.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|167510520|gb|EDR85918.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529583|gb|EDR92333.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127583|gb|EDS96457.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667149|gb|EDT17910.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080165|gb|EDT65258.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559931|gb|EDV13915.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|229264530|gb|ACQ46167.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 660

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLRE 340


>gi|260654939|ref|ZP_05860427.1| valine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630254|gb|EEX48448.1| valine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 891

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 33/192 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K     +  G+ +            I     N TG +HVGH     + D L       GY
Sbjct: 20  KWYQWWIDQGLFHADENDDTRETFTIVLPPPNVTGALHVGHAYDHTLQDVLCRYKRARGY 79

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                V W            LP   + G+  ++V +    K   
Sbjct: 80  N--------------------VLW------------LPGTDHAGIATQNVVERALAKQGL 107

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           +  +   E ++  V ++  +   +I+   +K L    D          G    +R +   
Sbjct: 108 KRQDLGREAFIEKVWEWKKEYGGRIVSQ-MKRLGDSCDWDRERFTMDEGLSKAVRAVFAR 166

Query: 280 LARQGYVYEGIL 291
           L  +G +Y G  
Sbjct: 167 LYEKGLIYRGKY 178


>gi|291525950|emb|CBK91537.1| valyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 882

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 75/248 (30%), Gaps = 33/248 (13%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N    P  +   L         +   +        I     N TG +H+GH     + D
Sbjct: 5   LNKTYDPKDIEDRLYKKWEDNGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       GY                            AL+   +D          ++ 
Sbjct: 65  ILIRYKRMQGYN---------------------------ALWQPGTDHASIATEVKVIQA 97

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + ++  +K      +   E++L    D+  +   +I++  L+ L    D          G
Sbjct: 98  LKEQGINKA-----DLTREEFLEKCWDWRKEYGGRIVKQ-LRKLGSSADWQRERFTMDEG 151

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               ++++   L ++G++Y+G          +    D +            ++ P++  +
Sbjct: 152 CSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 211

Query: 329 GSYTYFAA 336
           G +   A 
Sbjct: 212 GRFVEIAT 219


>gi|116629854|ref|YP_815026.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853954|ref|ZP_04644311.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851633|ref|ZP_06260998.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110508|ref|ZP_07711905.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116095436|gb|ABJ60588.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238833399|gb|EEQ25679.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557601|gb|EFB63198.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065662|gb|EFQ46002.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 879

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMEGYD--TLYLPG-----MDHAGIATQAKVEAKL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K   +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 98  -RKQGKDRHQMGREAFVKQVWDWK-DEYANIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          Q    D
Sbjct: 156 RKVFVQLYNEGLIYRGEYIINWDPELQTALSD 187



 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 88/289 (30%), Gaps = 46/289 (15%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL------------ 206
           + + R   +ND G               +A      DL +  Y                 
Sbjct: 289 HNLERINVMNDDGTMNEEAGKYAGMDRFEAREALVKDLKKEGYLIKVEPIVHSVGHSERS 348

Query: 207 -KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V   L+ ++  ++    EE       D  V  + +     L         ++     
Sbjct: 349 GVQVEPRLSKQWFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQL 408

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD---RKQLLFRSTMVGDDVDR 322
             G    I    +    + YV E      ++       +D      L   ST+   D D 
Sbjct: 409 WWGH--RIPAWYNKKTGETYVGEEAPKDIENWEQDPDVLDTWFSSALWPFSTLGWPDTDN 466

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKA 379
           P  K      YF             G+D +I+   S       +  +          K+ 
Sbjct: 467 PDFKR-----YFPT------NTLVTGYD-IIFFWVSRMIFQGLHFTK----------KRP 504

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             +V+L     L RD    KMSK  G+ +    VVD+ G+D++R+ +L 
Sbjct: 505 FKDVVLHG---LMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRWFLLN 550


>gi|325696381|gb|EGD38272.1| valine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 883

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLNKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|301170146|emb|CBW29750.1| valyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 954

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPTENEHAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLV 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|212637881|ref|YP_002314401.1| methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559361|gb|ACJ32416.1| Methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 656

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 108/336 (32%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V            +         +  Q    
Sbjct: 22  PSDKLHIGHAYTTVAGDAMARYKRMRGYDV------------MYLTGTDEHGQKIQRKAE 69

Query: 192 NDSDLPEGYYPGVY--LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR-DD 248
                P+ Y   +   +K + K+L   Y   +    +     + K ++       I  D+
Sbjct: 70  EKGVTPQQYVDEIVAGIKELWKKLDISYDDFIRTTEQRHKQVVEKIFARLLEQGDIYLDE 129

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  Q Y +       +     + +    
Sbjct: 130 YEGWYCTPCESFYTERQLVEGNCPDCGRPVEKVKEQSYFFRMSKYVDRLLAFYEENPQFI 189

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q   R   + ++  +P             DLA  +  ++ G        ++IYV      
Sbjct: 190 QPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIPVPGDPKHVIYVWIDALS 239

Query: 357 --------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                   G+++   Y     A    V ++  + + +   ++ +  D             
Sbjct: 240 NYITALGYGTENDEKYKTYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWL 299

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 300 LMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 335


>gi|158291293|ref|XP_312818.3| AGAP003132-PA [Anopheles gambiae str. PEST]
 gi|157017705|gb|EAA44776.3| AGAP003132-PA [Anopheles gambiae str. PEST]
          Length = 384

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 13/168 (7%)

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK--VKEQSKENPVFYVQYAYAR 460
           R  D   L+ +V  +G  +    ML  +++ ++D    +  ++ Q       ++ Y YAR
Sbjct: 219 RLPDVSKLQRLVSSLGRSAAMVDMLHTRHTHVIDMRSQQGILRNQCSSKGASFIMYNYAR 278

Query: 461 CRSIFRQAKDIFP-DLDFDLFPRNVIPQESEFDTSELQLI-VHLAEYPRVIENATIAQEP 518
             SI R+  ++        + P   I      D  E  L+  +L  +P  I+      +P
Sbjct: 279 LASILRKHTELVEQGAGTAIPPVADIDFSLLTDPDEWLLLYAYLMRFPHTIQQTIGYGQP 338

Query: 519 Y-KLAFY-LYD----LASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
             ++A Y L +    L      ++   R     R      + + + RL
Sbjct: 339 DGRIAPYHLLNFTLCLIKCLSKYYRRVRILTENRPRL---QPVMLARL 383


>gi|238924929|ref|YP_002938445.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876604|gb|ACR76311.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|291527316|emb|CBK92902.1| valyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 882

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 75/248 (30%), Gaps = 33/248 (13%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N    P  +   L         +   +        I     N TG +H+GH     + D
Sbjct: 5   LNKTYDPKDIEDRLYKKWEDNGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       GY                            AL+   +D          ++ 
Sbjct: 65  ILIRYKRMQGYN---------------------------ALWQPGTDHASIATEVKVIQA 97

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + ++  +K      +   E++L    D+  +   +I++  L+ L    D          G
Sbjct: 98  LKEQGINKA-----DLTREEFLEKCWDWRKEYGGRIVKQ-LRKLGSSADWQRERFTMDEG 151

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               ++++   L ++G++Y+G          +    D +            ++ P++  +
Sbjct: 152 CSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 211

Query: 329 GSYTYFAA 336
           G +   A 
Sbjct: 212 GRFVEIAT 219


>gi|313206616|ref|YP_004045793.1| isoleucyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445932|gb|ADQ82287.1| Isoleucyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
          Length = 1132

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 31/176 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A +V +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 644 GVDQTRGWFYTLHAIATSVFDSVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFDTLA 700

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G D+ R+ M+   N  E L FD   V E  ++          F+  YA         +
Sbjct: 701 KYGPDATRWYMISNANPWENLKFDIDGVDEVRRKFFGTLYNTYSFFALYANVDGFKYAEK 760

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +  P++D  +     I            L+  + E+           EP K+A 
Sbjct: 761 EVENRPEIDRWILSELNI------------LVKEVTEF-------YNDYEPTKVAR 797


>gi|332290078|ref|YP_004420930.1| valyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432974|gb|AEC18033.1| valyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 958

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 10  RFDPSAVEQALYKHWEEQGYFKPNENPNAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFHRMEGDNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFIEKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|326791024|ref|YP_004308845.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541788|gb|ADZ83647.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 880

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 58/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + + L    +    +   +        I     N TG +H+GH     + D L   
Sbjct: 9   DPSSVEERLYHQWMEKGYFHAEVEKDKKPFTIVMPPPNITGQLHMGHALDNTLQDILTRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+                             L+   +D          ++ +  E 
Sbjct: 69  KRMQGFNT---------------------------LWVPGTDHASIATEVKVVEKIAAEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   E +L  V ++  Q   + I + LK L    D          G    +
Sbjct: 102 LTKE-----DLGREGFLEKVWEWKEQYGGR-IVEQLKKLGSSCDWDRERFTMDEGCSEAV 155

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +GY+Y G
Sbjct: 156 QEVFIRLYEKGYIYRG 171


>gi|228950587|ref|ZP_04112722.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228809062|gb|EEM55546.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 660

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 111/349 (31%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+ ++   +   +    +++ +  ++   +D     + KI +  +  
Sbjct: 67  -------NITPQAYVDNIVAGIKGLWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV                ++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|225026786|ref|ZP_03715978.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
 gi|224955905|gb|EEG37114.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
          Length = 880

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 56/198 (28%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS +   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYNPSEIEDRLYKKWLDKKYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +    L     D  E    G   +    
Sbjct: 68  RFKRMQGYNAL-------WQPGTDHASIATEVKVTNKLREEGIDKEELGREGFLKRT--W 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y   +++                         LK L    D          G   
Sbjct: 119 EWREEYGGRIVSQ------------------------LKKLGSSADWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++++   L  +GY+Y+G
Sbjct: 155 AVQEVFIRLYEKGYIYQG 172


>gi|315022110|gb|EFT35139.1| isoleucyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335943|gb|ADZ12217.1| Isoleucyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 1132

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 31/176 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A +V +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 644 GVDQTRGWFYTLHAIATSVFDSVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFDTLA 700

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G D+ R+ M+   N  E L FD   V E  ++          F+  YA         +
Sbjct: 701 KYGPDATRWYMISNANPWENLKFDIDGVDEVRRKFFGTLYNTYSFFALYANVDGFKYAEK 760

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +  P++D  +     I            L+  + E+           EP K+A 
Sbjct: 761 EVENRPEIDRWILSELNI------------LVKEVTEF-------YNDYEPTKVAR 797


>gi|307710823|ref|ZP_07647251.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617429|gb|EFN96601.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 883

 Score = 55.7 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLKKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRTLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|299782988|gb|ADJ40986.1| Valine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 886

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + +      +    +  +   K    +I     N TG +H+GH     + D + 
Sbjct: 9   KFDPQAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+V            ++   ++   + +  L                      
Sbjct: 69  RQKRMQGYDVL-------WLPGMDHAGIATQAKVEARL---------------------- 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   EK++  V D+       II      + I  D          G   
Sbjct: 100 ---AKQGVSRYDLGREKFVKQVWDWK-DEYAAIIHQQWAKMGISVDYDRERFTLDEGLNK 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +R +  +L  +G +Y            +    D
Sbjct: 156 AVRKVFVDLYNKGLIYRATYIINWDPKARTALSD 189


>gi|52078587|ref|YP_077378.1| glutamyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783948|ref|YP_089777.1| glutamyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319649139|ref|ZP_08003347.1| glutamyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|67461714|sp|Q65PD0|SYE_BACLD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|52001798|gb|AAU21740.1| glutamyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346450|gb|AAU39084.1| GltX [Bacillus licheniformis ATCC 14580]
 gi|317388839|gb|EFV69658.1| glutamyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 485

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---SQGGKFIIRIEDTDRKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +  R 
Sbjct: 67  GIDWDESVDVGGEYGPYRQSERNDIYKTYYEELLEKGLAYKCYCTEEELEKEREEQAARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +      E+              + L  +G         P+ +  +  D+ + 
Sbjct: 127 EMPRYSGKCRNLTKEEQ-------------EKLEAEGRQPSIRFKVPQGEVIRFDDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F +  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFETDGIGDF---VIVKKDGTPTY---NFAVAVDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A+         +      L  +    K+SKR    I      +E+G 
Sbjct: 226 IMIYNALGWDIPAFGHM-----TLIVNESRKKLSKRDESIIQFIEQYEELGY 272


>gi|116629009|ref|YP_814181.1| glutamyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282852701|ref|ZP_06262043.1| glutamate--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311111195|ref|ZP_07712592.1| glutamate--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273993|sp|Q045X9|SYE_LACGA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116094591|gb|ABJ59743.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase
           [Lactobacillus gasseri ATCC 33323]
 gi|282556443|gb|EFB62063.1| glutamate--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066349|gb|EFQ46689.1| glutamate--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 499

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 111/309 (35%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   K++ +KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDFGPYRQSERKDIYNKYIKQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I+    +   +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQADAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+++T    DM + ++ F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPENRTYAWDDMVKGKVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|184154973|ref|YP_001843313.1| valyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|183226317|dbj|BAG26833.1| valyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 884

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + +      +    +  +   K    +I     N TG +H+GH     + D + 
Sbjct: 9   KFDPQAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+V            ++   ++   + +  L                      
Sbjct: 69  RQKRMQGYDVL-------WLPGMDHAGIATQAKVEARL---------------------- 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   EK++  V D+       II      + I  D          G   
Sbjct: 100 ---AKQGVSRYDLGREKFVKQVWDWK-DEYAAIIHQQWAKMGISVDYDRERFTLDEGLNK 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +R +  +L  +G +Y            +    D
Sbjct: 156 AVRKVFVDLYNKGLIYRATYIINWDPKARTALSD 189


>gi|225010216|ref|ZP_03700688.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005695|gb|EEG43645.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 1134

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 19/166 (11%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V ++ A  NV+   +V L +DG   KMSKR G+ I     + 
Sbjct: 641 GVDQTRGWFYTLHAIATMVFDRPAYKNVVSNGMV-LDKDGK--KMSKRLGNAIDPFETIA 697

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G+D+ R+ M+   N  + L FD   + E + K     Y  Y++    +      +  P
Sbjct: 698 AHGADATRWYMIANANPWDNLKFDTEGIVEVKRKFFGTLYNTYSFFSLYANLDHFDNSAP 757

Query: 474 DLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEP 518
            +     P    P+   +  SEL  LI+        +E A    EP
Sbjct: 758 QI-----PLADRPEIDRWVLSELNSLIIR-------VEAAYETYEP 791


>gi|194398081|ref|YP_002037231.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357748|gb|ACF56196.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 883

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPADVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAINPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|16082163|ref|NP_394604.1| cysteinyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|21264025|sp|Q9HJ27|SYC_THEAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10640458|emb|CAC12272.1| probable cysteinyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 452

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 115/393 (29%), Gaps = 88/393 (22%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++N+           H+GH R  +  D +A L+   GY                
Sbjct: 15  KEMNSGRINMFVCGPTVQDHFHIGHARTYIFFDAVAKLLRNLGY---------------- 58

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               SVF+                      +  +  ++ +K     +   +         
Sbjct: 59  ----SVFYLQN-------------------ITDIDDKIINKAREMNIQPQDVA------- 88

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 ++   +D+ AL +    + ++   +  +   I   I  L  +GY YE       
Sbjct: 89  ---DMYLREFLEDMSALKVTSVNYFAKSTLYINE---IISQISRLIEKGYAYETSDGVYF 142

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDV----------DRPLLKSD-------------GSYT 332
             +                + G  V          D  L K               G   
Sbjct: 143 EVSKFADYGQLSNQSLDQIIHGYRVAVNENKRNPEDFVLWKKRKPGEPYWDSPWGPGRPG 202

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           +   D A  +  +   +D    + G          EA  A +     +  +    +    
Sbjct: 203 WHIEDTAITETYFGPEYD----IHGGGSDLIFPHHEAEIAQMRAISGRKYLSHYWIHTGM 258

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            +    KMSK   +F+T+R V+ E   + +R+ +L       LDF    ++E  K+  V 
Sbjct: 259 INVNNEKMSKSLKNFVTIREVLKEYRPEDLRYALLNANYRTQLDFSKGLLEESRKQ--VE 316

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           Y+        S FR+  +   + D    P  VI
Sbjct: 317 YL-------NSTFRKLVNASGNSDLSADPSAVI 342


>gi|295399732|ref|ZP_06809713.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978135|gb|EFG53732.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 923

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 71/341 (20%), Positives = 118/341 (34%), Gaps = 73/341 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   ELL    E KW+P   +  +  M++  R D      +A  +   +F  E     G
Sbjct: 415 DKIRGELLQAIKETKWIPEWGEIRIHNMIRD-RGDWCISRQRAWGVPIPVFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         + D   + F S
Sbjct: 470 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++ D        DL       +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 ---GSSHQAVLVERD--------DL-------QRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V++++G+D +R  +      
Sbjct: 570 AVTGKAPYKAVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR          FD  P       +E  
Sbjct: 627 ADVRISDSILKQVAE---------VYRKIRNTFRFMLGNL----FDFNPETDAVPVNELR 673

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             +  ++V L      ++ A             YD AS++H
Sbjct: 674 EVDRYMLVKLNRLIEKVKQAYET----------YDFASIYH 704


>gi|227514511|ref|ZP_03944560.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087068|gb|EEI22380.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 884

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + +      +    +  +   K    +I     N TG +H+GH     + D + 
Sbjct: 9   KFDPQAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+V            ++   ++   + +  L                      
Sbjct: 69  RQKRMQGYDVL-------WLPGMDHAGIATQAKVEARL---------------------- 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   EK++  V D+       II      + I  D          G   
Sbjct: 100 ---AKQGVSRYDLGREKFVKQVWDWK-DEYAAIIHQQWAKMGISVDYDRERFTLDEGLNK 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +R +  +L  +G +Y            +    D
Sbjct: 156 AVRKVFVDLYNKGLIYRATYIINWDPKARTALSD 189


>gi|225858409|ref|YP_002739919.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225720884|gb|ACO16738.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 883

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|303231911|ref|ZP_07318620.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513440|gb|EFL55473.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 649

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 79/463 (17%), Positives = 158/463 (34%), Gaps = 90/463 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + +   + +   +V++   +A  K  I + + 
Sbjct: 69  TPLEYTTNIVNGFKALWEKMHIS---NDDFIRTTDARHEKVVQELFTKAYEKGDIYKAEY 125

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +       + F +E     G+     D    ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPCESFWTEQKL--GENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V + L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRRNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
                  KMSK  G+ I    ++D  G+DS+R+ +L        D +F      +K N  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPNPLIDIYGADSLRYYLLSEITLGH-DGNFTLPNFVTKINAD 351

Query: 452 FYVQYAYARCRSIF--RQAK-------DIFPDLDFD---LFPRNVIPQESEFDTSE---- 495
                     R+I    +         D   DLD +   L  + V   ES+ +  E    
Sbjct: 352 LSNDLGNLLNRTIAMIEKYHGGIITKTDDVDDLDKEISSLAEQTVADFESQMEAMELNKA 411

Query: 496 ----LQLIVHLAEY-----PRVIENATIAQEPYKLAFYLYDLA 529
                  I  + +Y     P V+  ++   + ++L   +Y LA
Sbjct: 412 LKTVWAFISRMNKYIDETMPWVLAKSSDEADVHRLKSVMYHLA 454


>gi|302335861|ref|YP_003801068.1| glutamyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319701|gb|ADK68188.1| glutamyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 497

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 100/291 (34%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     + TR    N    Q+  +  ++ 
Sbjct: 14  APSPTGKLHVGGARTAIYNWAFARAHKGTFILRIDDTDPTRSTEEN---TQV--ILRAMR 68

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D   P G Y         ++ A +  SE             + Y      
Sbjct: 69  WLGLDWDEGPDVGGPCGPYKQTDRLDTYRDAAQRLVSEG------------RAYYCFCSA 116

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +  D KA   +HD F       RG DP+  +  +D     G  Y   +  P  +    
Sbjct: 117 EKLAADRKAAEERHDPFQGYQRSCRGIDPAEAQRRVDA----GEPYTIRIKVPDGRGDVA 172

Query: 302 C-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     ++F +  + D +   + +SDG+ TY   + A      + G  ++I   G DH
Sbjct: 173 IHDAVHGDVIFNARELDDFI---IFRSDGTPTY---NFATVVDDADMGITHVIR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   V  A+        V     + L  DG   K+SKR G      
Sbjct: 225 LSNTPRQVMVYEALGAPTP---VFAHISMILGPDGK--KLSKRHGATSVEE 270


>gi|28211899|ref|NP_782843.1| valyl-tRNA synthetase [Clostridium tetani E88]
 gi|75541792|sp|Q891R5|SYV_CLOTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28204342|gb|AAO36780.1| valyl-tRNA synthetase [Clostridium tetani E88]
          Length = 880

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 62/203 (30%), Gaps = 35/203 (17%)

Query: 89  INL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           IN+     P    + +  +   G  +   +        I     N TG +H+GH     +
Sbjct: 5   INIAKTYDPKEFEERIYKMWEEGEYFTPKVDKDKKPYTIVMPPPNITGKLHLGHALDNSM 64

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L  +    GY                    S  W   Q   +  +++          
Sbjct: 65  QDFLIRVKRMQGY--------------------STLWLPGQDHASIATEVK--------- 95

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             V  EL  K   +      E +L  V ++S +     IRD LK L    D         
Sbjct: 96  --VENELL-KTGLKKKEMGREAFLERVWEWS-EEYRGRIRDQLKKLGSSADFTRESFTMD 151

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
                 +R +   L  +G +Y+G
Sbjct: 152 DNLDKAVRAVFVKLYEEGLIYKG 174


>gi|157690820|ref|YP_001485282.1| methionyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679578|gb|ABV60722.1| methionine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 666

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 113/350 (32%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I           Q+A   
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKI----------QQKAEEQ 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N + +        YL  V  ++   +    L+   + ++   +      + ++ +  L  
Sbjct: 67  NITPI-------EYLDPVVADIQSLWKK--LDISNDDFIRTTEKRHTIIIGQVFQKLLDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V                 +  +   
Sbjct: 118 GDIYLDQYEGWYSIPDETFYTETQLVDVEHNEKGEV---TGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD--- 350
           FR +      DR L   + + T+                    DLA  +  ++ G     
Sbjct: 175 FRMSKY---ADRLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPN 231

Query: 351 ---NMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              ++IYV              G+D    Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVIYVWIDALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 DLPLPKQIFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 341


>gi|306830047|ref|ZP_07463233.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427760|gb|EFM30854.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264



 Score = 37.2 bits (85), Expect = 7.1,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|163782286|ref|ZP_02177284.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882319|gb|EDP75825.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 1171

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 68/226 (30%), Gaps = 41/226 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +    S   +    Y      +  K ++     N TG +H+GH   + + D +A  
Sbjct: 8   NPSEIEDRWSKFWIERAIYHVEKPDRRKKFSVVIPPPNVTGSLHMGHALNSTLQDIVAR- 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                      V W            +P   + G+  ++V  + 
Sbjct: 67  -------------------WQRMKGRQVVW------------VPGFDHAGIATQYVVDKQ 95

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +     L    ++++  V ++  ++    IR  L+ L +  D          G    +
Sbjct: 96  LQEEGKSRLELGRQEFIRKVWEWVPKS-RNAIRTQLEKLGVSVDWKRERFTLDEGFSRAV 154

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLF 311
           R     L   G +Y                S    + + ++ +L +
Sbjct: 155 RKAFRELYENGLIYRSEYIVNWCPKDLTALSDLEVEHEEEKGKLWY 200



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 82/247 (33%), Gaps = 33/247 (13%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +     E     +V +  LV   RD    K
Sbjct: 754 YPTDLLVTGFD-IIFFW-------VARMIMMGTYFMEDIPFHDVYVHALV---RDEKGQK 802

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V+ + G+D++RF  L     +  D    K + +          Y + 
Sbjct: 803 MSKTKGNVIDPLDVIKDYGADALRFT-LAILTVQGRDIKLSKKRFEG---------YKHF 852

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             +         F  ++       ++P  +     +  ++  L E    +  A  + +  
Sbjct: 853 ANKI---WNATRFVLMNTPDDFATMLPYMAPLKPEDRWIMTLLNETAEKVNRALESYDFS 909

Query: 520 KLAFYLYDLA-SVFHGHWSHGRENPRLRFV-QANNRKLTMMRLQ-LVHAVAS------II 570
           + +  +YD   S F   +    +    R + +  +      R   L     +      ++
Sbjct: 910 RASQAIYDFFWSDFCDWYIEFTKERIYRELPEGEDEAAQKERATILSEKTTALYTLHYVL 969

Query: 571 NSGLNII 577
              L I+
Sbjct: 970 EKALRIL 976


>gi|300866989|ref|ZP_07111660.1| putative Arginyl tRNA synthetase, anticodon binding [Oscillatoria
           sp. PCC 6506]
 gi|300335024|emb|CBN56826.1| putative Arginyl tRNA synthetase, anticodon binding [Oscillatoria
           sp. PCC 6506]
          Length = 296

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 41/164 (25%)

Query: 451 VFYVQYAYARCRSIFRQA------KDIFPDLDFDLFPRNVIP-----------QESEFDT 493
           +F VQY++ARC S+ R A      + +  D    L P  +I            +      
Sbjct: 139 IFPVQYSHARCCSLLRLADRDRIIELVERDRQTSLAPWQIINPNPIPWLNSNNRLRLIHP 198

Query: 494 SELQLIVHL------------AEY--PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
           +EL LI  L              +  P +   +T      KLA     L+  F   +S  
Sbjct: 199 AELNLISQLFTTLDTLASLFNGGFEKPLITNKSTDWL---KLAN---TLSDTFQTFYSQC 252

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NIIGVESP 582
           R       V+    KL   RL L+ A  +++   L  ++G+ +P
Sbjct: 253 RIWGE---VKTETPKLAQARLGLILATQTLLQFILQELLGIIAP 293


>gi|238853163|ref|ZP_04643550.1| glutamate--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834217|gb|EEQ26467.1| glutamate--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 499

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 111/309 (35%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI  L     W         D    +G   G Y +   K++ +KY  +L++        
Sbjct: 59  SQIENL----HWLGIDWDEGPD----KGGDFGPYRQSERKDIYNKYIKQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I+    +   +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQADAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+++T    DM + ++ F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPENRTYAWDDMVKGKVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|228473006|ref|ZP_04057763.1| glutamate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275588|gb|EEK14365.1| glutamate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 509

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 99/287 (34%), Gaps = 36/287 (12%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          GD L  +      +  +  Y+  A      +  
Sbjct: 10  APSPTGPLHIGGLRTALFNYLFAKKHGGDFLLRI-----EDTDQVRYVEGAE---AYIME 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++ W     +  ++    EG     Y +   K +  +Y+  LL+  E  +      +   
Sbjct: 62  ALQWC---GITYDEGVGKEGGPHAPYRQSERKAIYAEYAQMLLDKGEAYY-----AFDTA 113

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R   +             +      S   + +     +G  Y      P+ +T 
Sbjct: 114 QELDAQRKAYEERGETFIYNWHNREKLNNAFSLSPEEVKKRIEEGVPYVVRFKMPQ-ETL 172

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R +++  + ++    D+ L KSDG  TY    LA     +     ++I   G +
Sbjct: 173 TLHDLIRGEVVVDTKLLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--GEE 224

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               +     +  A   +  Q   L   L+         K+SKR GD
Sbjct: 225 WLPSMALHVLMYRAFGWQAPQFAHL--PLILKPAGMGNGKLSKRDGD 269


>gi|329116643|ref|ZP_08245360.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907048|gb|EGE53962.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +        +I     N TG +H+GH     + D +   
Sbjct: 10  NPTEVEAGRYDKWLDQDVFKPSGDKTAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V D+        I++    + I  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLEKVWDWK-DEYASTIKEQWGKMGISVDYSRERFTLDDGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +  T + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMTYMLEDGSRGLQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243



 Score = 38.0 bits (87), Expect = 4.4,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            +G +Y G   P   +  Q  D+        L   STM   D D             A D
Sbjct: 421 AEGEIYVGEEEPDGDEWVQDEDVLDTWFSSALWPFSTMGWPDTD-------------AED 467

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDG 395
                  ++R F     V G D   +      +  ++     +   NVL+  L+   RD 
Sbjct: 468 -------FKRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTDQRPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 EGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|297621535|ref|YP_003709672.1| Valyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376836|gb|ADI38666.1| Valyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 948

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 78/270 (28%), Gaps = 41/270 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             S   + K           +  +   +     I     N TG +H+GH   + + D L 
Sbjct: 8   TYSAQQVEKRWYDFWEKHECFRADPSSEKPPYCIVLPPPNVTGVLHMGHALGSTIDDVLV 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                SG+EV      + AG    T+                               V +
Sbjct: 68  RWKRMSGFEVLWVPGTDHAGIATQTV-------------------------------VER 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L         +F  E +L +V ++  +   +I+   LK L    D         +G+  
Sbjct: 97  HLMKTQGKRRGDFKREAFLKLVWEWKEKNEGRILSQ-LKKLGCSCDWSRLRFTMDKGNNL 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK--------QLLFRSTMVGDDVDRP 323
            +R     L  +G +Y G         TQ    D +         L F +  + D     
Sbjct: 156 AVRTAFKMLYEKGLIYRGDYLVNWDPVTQTAVADDEVEYEERQSSLWFFNYPLADGSGMA 215

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            + +         D A      +  F ++I
Sbjct: 216 RIATT-RPETMLGDTAVAVNPEDPMFKHLI 244


>gi|300362341|ref|ZP_07058517.1| glutamate--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353332|gb|EFJ69204.1| glutamate--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 499

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 111/309 (35%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   K++ +KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDFGPYRQSERKDIYNKYIKQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I+    +   +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQADAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+++T    DM + ++ F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPENRTYAWDDMVKGKVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|307126771|ref|YP_003878802.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483833|gb|ADM90702.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|332202451|gb|EGJ16520.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAINPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|317472407|ref|ZP_07931732.1| arginyl tRNA synthetase N terminal domain-containing protein
          [Anaerostipes sp. 3_2_56FAA]
 gi|316900127|gb|EFV22116.1| arginyl tRNA synthetase N terminal domain-containing protein
          [Anaerostipes sp. 3_2_56FAA]
          Length = 77

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 7  FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
            +++ + +   D   +++++ + RI +E P     G  +      L++     P  IA+
Sbjct: 1  MRNKIIDLIT--DSIKELDRETVSRI-LEIPPQEDMGDFAFP-CFQLAKIFRKAPTIIAQ 56

Query: 67 LIVARIK 73
           +  +IK
Sbjct: 57 EVAEKIK 63


>gi|323350983|ref|ZP_08086640.1| valine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122707|gb|EFX94416.1| valine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 882

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  + L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSQALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPKDPRYKDLI 243


>gi|225574666|ref|ZP_03783276.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038134|gb|EEG48380.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM
           10507]
          Length = 739

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 69/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L    +    +   +        I     N TG +H+GH     + D + 
Sbjct: 8   TYDPKGIEEKLYQKWMDRGYFHAKVNPDKKPFTIVMPPPNITGQLHMGHALDNTLQDIMI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +  + L     D  E      +LKH   
Sbjct: 68  RFKRMQGYETL-------WQPGTDHAAIATEVKVIEKLKEQGIDKNEIG-REEFLKH-AW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              ++Y                           I + LK + +  D          G   
Sbjct: 119 AWKEEYGGR------------------------INNQLKKMGVSADWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   +  +GY+Y+G          +    D +            +  P++  +G Y
Sbjct: 155 AVQEVFIRMYNKGYIYKGSRIINWCPVCKTSISDAEVEHEDQNGFFWHIKYPIVGEEGRY 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219



 Score = 38.4 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 82/222 (36%), Gaps = 33/222 (14%)

Query: 363 YVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           +   +  V +A+    K   + +L     L RD    KMSK  G+ I    V+D+ G+D+
Sbjct: 490 FFWVIRMVFSALEQTGKTPFHHVLIHG--LVRDSQGRKMSKSLGNGIDPLEVIDKYGADA 547

Query: 422 VRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +R  ++        + F + KV+                  R+   +  +    +  +L 
Sbjct: 548 LRLTLVTGNAPGNDMRFYWEKVEAS----------------RNFANKVWNASRFILMNLE 591

Query: 481 PRNVI-PQESEFDTSELQLIVHLAEYPRVIENATIAQEP----YKLAFYLYDLASVFHGH 535
            + V  P  ++ +  +  ++  L    + +       E      K+  +L+D+   F   
Sbjct: 592 GKTVTEPDLAQLNPEDRWILSKLNTVAQEVTENMEKYELGIAVQKIYDFLWDV---FCDW 648

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +    E  ++R  +A           L   + +++  GL ++
Sbjct: 649 Y---IEMAKVRIWKAEEAP-KEANDAL-WTLRTVLTEGLKLL 685


>gi|168485679|ref|ZP_02710187.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571212|gb|EDT91740.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAIAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|291287646|ref|YP_003504462.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884806|gb|ADD68506.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 874

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            + P+     +         +  +        +I     N TG +H+GH     + D + 
Sbjct: 8   RIDPAEFESSIYKEWEERKYFHADETSDKPPYSIVIPPPNVTGSLHMGHALNNTLQDIMI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GYE                                   +P   + G+  ++V +
Sbjct: 68  RFHKLNGYETM--------------------------------WMPGMDHAGIATQNVVE 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L             E+++  V ++  ++  KII   LK L    D          G   
Sbjct: 96  RLLASEGKSRHELGREEFIERVWEWKEESGGKIINQ-LKRLGCSCDWDRERFTMDEGLSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R +   L ++G +Y  
Sbjct: 155 AVRKVFVTLYKEGLIYRS 172


>gi|150019973|ref|YP_001305327.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|187631644|sp|A6LJ41|SYC_THEM4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149792494|gb|ABR29942.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 469

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 72/431 (16%), Positives = 139/431 (32%), Gaps = 83/431 (19%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R AVV D     + + GY+V                        Q 
Sbjct: 29  CGPTVYNYIHIGNARPAVVFDAFRRFLEYRGYKVVMV---------------------QN 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW------LPIVKDYSVQAM 241
               +D  + E    GV  K V      +Y  +  N               VK+  V+A+
Sbjct: 68  FTDIDDKIINEANAWGVNFKDVADTFIAEYWKDAENLGIRAANFHPRTTDYVKEI-VEAV 126

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            K+I  +   +    D++ S  +F            D     G   E ++   + + ++ 
Sbjct: 127 EKLIAKNYAYVADNGDVYFSVKEFK-----------DYGKLSGKKLEDLVAGARVEVSEL 175

Query: 302 CDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD- 359
                   L+++   G+   D P    +G   +        +      FD  I+  G D 
Sbjct: 176 KKNPLDFALWKAVKPGEPSWDSPW--GNGRPGWHIECSVMSQRLLGDSFD--IHAGGEDL 231

Query: 360 ----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               H     + EA+       K      +   + + R     KMSK  G+   +R  V 
Sbjct: 232 IFPHHEDEKAQSEAL-----TGKPFAKYWMHNGMIITRG---DKMSKSIGNVFLVREAVK 283

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D+V+  +L +     ++F    +    K         A  R  +   + ++ +P  
Sbjct: 284 RYGKDAVKLFLLSKHYRTPIEFSHEIMFNTKK---------AALRILNTLNRFEEKYPY- 333

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                   V  +++  +  E       A +   +E+      P  +A  +++L+   +  
Sbjct: 334 ------PLVPKRDTFMNDME-------ARFVEALED--DFNTPRVIAL-IFELSKDLNKA 377

Query: 536 WSHGRENPRLR 546
              G+E   L+
Sbjct: 378 MDEGKEEEALK 388


>gi|269797679|ref|YP_003311579.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094308|gb|ACZ24299.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 648

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 117/338 (34%), Gaps = 64/338 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + +   +E+   +V++   +A  K  I + + 
Sbjct: 69  TPLEYTTNIVNGFKALWEKMHIS---NDDFIRTTDERHEKVVQELFTKAYEKGDIYKAEY 125

Query: 250 KALNIQHDIFISEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +      D     +   +  P+         ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPDETFWTE--QKLGPNHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V + L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRRNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPIPLIDTYGADSLRYYLLSE 330


>gi|205372010|ref|ZP_03224828.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Bacillus
           coahuilensis m4-4]
          Length = 652

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 108/335 (32%), Gaps = 58/335 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I         R  +    
Sbjct: 17  PSGNLHIGHAYTTVAGDAMARYKRLRGFDVMYLTGTDEHGQKI--------QRKAEEQNV 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIRDDL 249
              +  +    GV       E  D    + +   E +   +V+    Q      I  D  
Sbjct: 69  TPIEYVDEIVKGVKDL---WEKLDISYDDYIRTTESRHKQVVEKIFAQLVEQGDIYLDQY 125

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +       + F +E     G        ++ +  + Y ++  +     +  Q  + +   
Sbjct: 126 EGWYCTPCESFFTERQLVDGKCPDCGREVEKVKEESYFFK--VSKYADRLLQYYEENPG- 182

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM------ 356
              +     +++    +K          DLA  +  ++ G        +++YV       
Sbjct: 183 -FIQPESRKNEMINNFIKPG------LEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSN 235

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                     D   YV    A    V ++  + + +   ++ +  D              
Sbjct: 236 YISALGYGSEDDHKYVNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLL 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ +    ++D  G DS+R+ +L  
Sbjct: 296 MKDGKMSKSKGNVVDPVTLIDRYGLDSLRYYLLRE 330


>gi|325958959|ref|YP_004290425.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330391|gb|ADZ09453.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 467

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 123/362 (33%), Gaps = 42/362 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   M +SGY V   +Y+ +    I  L   +  R  + L  +  +L
Sbjct: 37  HIGHARTYISFDVIVRYMKYSGYSV---FYVQN----ITDLDDKILKRADE-LETSPLEL 88

Query: 197 PEGYYPGVYLKH---VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
               Y   YL+    +G E  + Y+    + PE     IV+   V        +  K   
Sbjct: 89  ARR-YEEKYLRDMELLGVEHVNLYARATEHIPE-----IVRQIGVLVDKGYAYETDKG-- 140

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
               ++  E  F         +    L+ +    E +        + K +     L  + 
Sbjct: 141 ----VYFDESKF---------EDFGKLSNRNL--EDLNVHRIGPDSSKRNPGDFALWKKR 185

Query: 314 TMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
             + ++ +         G   +   D A  +  +   +D    + G          EA  
Sbjct: 186 ERISEEQEMIWDSPWGTGRPGWHIEDTAITETYFGPQYD----IHGGGLDLIFPHHEAEI 241

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
           A +        ++   +   + +    KMSK  G+FIT+  +++E   +  RF +L    
Sbjct: 242 AQMEASSGIKPMVRYWMHTGFLNVKGEKMSKSLGNFITINELLEEYSPEVFRFFVLSTHY 301

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +DF    + + S+     Y      +  S      +I  D D D   +    +E  F
Sbjct: 302 RSPIDFSSEILHQSSQGLNRIYKLI--EKINSELDSDTNISLDNDSDYIQKLAAVREEFF 359

Query: 492 DT 493
           + 
Sbjct: 360 EA 361


>gi|222153465|ref|YP_002562642.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114278|emb|CAR42908.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPTEVEAGRYQKWLDQDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGQGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 105 -------RYDLGREKFLEKVWEWK-DEYAATIKEQWGKMGISVDYSRERFTLDEGLSQAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           + +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 KKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVQGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|116333229|ref|YP_794756.1| glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus brevis ATCC
           367]
 gi|122270083|sp|Q03SU7|SYE2_LACBA RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|116098576|gb|ABJ63725.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase
           [Lactobacillus brevis ATCC 367]
          Length = 496

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 96/291 (32%), Gaps = 22/291 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    I     S     +  
Sbjct: 11  APSPTGHLHIGNARTAIFNYLFAR--HNKGKFIIRIE-DTDTKRNIEDGERSQLENLKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +   +++      +LL+          K Y      + ++ D
Sbjct: 68  GLDWDEGPDVGGDYGPYRQSERRDIYTPLIQQLLDEG--------KAYESYRTEEELQAD 119

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   + ++   E ++        +  ID    +G         PK +     DM +  
Sbjct: 120 REAQKARKEMPHYEYEYAGMSEEEKQAAIDEAKAKGLKPVIRFRVPKDEVFAWDDMVKGH 179

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F S  +G D    + K DG  TY   + A     ++    ++    G DH     +  
Sbjct: 180 VSFNSDTIGGDF--VIAKRDGMPTY---NFAVVVDDHKMAISHV--FRGDDHVANTPKQL 232

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +  A   +  +   +   + +        K+SKR    +        +G 
Sbjct: 233 MIYQAFGWEAPKFGHMSLIISKD----TGKKLSKRDESVLQFIEQYRSLGY 279


>gi|312129266|ref|YP_003996606.1| glutamyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311905812|gb|ADQ16253.1| glutamyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 499

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 105/282 (37%), Gaps = 29/282 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G ++     I D                Q+A
Sbjct: 8   APSPTGPLHIGGVRTALYNYLFAR---KMGGKMLLR--IED--TDQTRFVPGATDYIQEA 60

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     ++ E    G   G Y++   K++  KY+ +LL+            +     +  
Sbjct: 61  LQWLGIEIDEGVGVGGDAGPYVQSERKDIYAKYAQQLLDEG-----KAYYAFDTPEELDQ 115

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +R +L+A  + +  + +       +   +  + ++     G  Y   L  P     +  D
Sbjct: 116 MRKELEAAKVDNISYNAFTRMKMKNSITLPAEEVEERISSGQPYVIRLKVPLKDEVRFKD 175

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + R  +   S+ +    D+ L+KSDG  TY    LA     +  G  ++I   G +    
Sbjct: 176 LVRGWVSVHSSTID---DKVLMKSDGMPTYH---LANIVDDHMMGITHVIR--GEEWLPS 227

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                 +  A   +  +    L  L++   +G   K+SKR G
Sbjct: 228 APLHILLYKAFGWQAPEFAH-LPLLLKPEGNG---KLSKRDG 265


>gi|303229591|ref|ZP_07316379.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515716|gb|EFL57670.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 649

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 118/338 (34%), Gaps = 64/338 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + +   + +   +V++   +A  K  I + + 
Sbjct: 69  TPLEYTTNIVNGFKALWEKMHIS---NDDFIRTTDARHEKVVQELFTKAYEKGDIYKAEY 125

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +       + F +E     G+     D    ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPCESFWTEQKL--GENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V + L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRRNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPNPLIDTYGADSLRYYLLSE 330


>gi|167629444|ref|YP_001679943.1| glutamyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687871|sp|B0TBU3|SYE_HELMI RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|167592184|gb|ABZ83932.1| glutamyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 496

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 87/283 (30%), Gaps = 36/283 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+    LA    F G  + R   + D    +   +         A
Sbjct: 9   APSPTGPLHIGGARSALFNFLLAR--RFGGQFIVR---VED--TDLERSSRESEDNILDA 61

Query: 189 LYNNDSDLPEGYYPG----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L        EG   G     Y +        + + +LL   +                  
Sbjct: 62  LEWLGITWDEGIRVGGPHAPYRQTERLHTYREAADKLLAEGKAYR------------CYC 109

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             ++L+A             +     S   D    L  +G         P        D+
Sbjct: 110 SEEELEAERQAFAEKGELPRYSGRCRSLSADDEARLRAEGRKPVIRFRVPDEGAVAIDDL 169

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R  + F    +GD +   ++KSDG  TY   + A      +    ++I   G +H    
Sbjct: 170 VRGHVSFECAGIGDFI---IVKSDGIPTY---NFAVVIDDAQMAITHVIR--GEEHLSNT 221

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            R   +  A+     +        V L       KMSKR G  
Sbjct: 222 PRQLLIYDALGLTPPKFAH-----VSLILGKDRSKMSKRHGST 259


>gi|149002240|ref|ZP_01827182.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759555|gb|EDK66546.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAIAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|15902536|ref|NP_358086.1| valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516342|ref|YP_816000.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81450080|sp|Q8DQU7|SYV_STRR6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15458063|gb|AAK99296.1| Valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076918|gb|ABJ54638.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAIAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|237650162|ref|ZP_04524414.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821761|ref|ZP_04597606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAIAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|168490541|ref|ZP_02714684.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574795|gb|EDT95323.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  NL ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|149005678|ref|ZP_01829417.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762618|gb|EDK69578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332077000|gb|EGI87462.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|332076405|gb|EGI86868.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  NL ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|217964301|ref|YP_002349979.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333571|gb|ACK39365.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571133|emb|CAR84312.1| valyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 884

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 57/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 17  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 76

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +    +             E  
Sbjct: 77  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKEENISRYDLGR--EKFVDKTWEWK 127

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 128 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 163

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 164 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 194



 Score = 37.6 bits (86), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           L RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 520 LVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 574


>gi|145634297|ref|ZP_01790007.1| valyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268277|gb|EDK08271.1| valyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 954

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENEHAPSYCIAIPPPNITGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|83320024|ref|YP_424122.1| glutamyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|115305774|sp|Q2SSZ1|SYE_MYCCT RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|83283910|gb|ABC01842.1| glutamyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 483

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 119/350 (34%), Gaps = 69/350 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A++    A    ++G  + R               +Q   L    
Sbjct: 8   APSPTGFLHIGNTRTALMNYLFAK--HYNGSFIVRIEDTDLARNVEGAIESQFENLNWL- 64

Query: 182 FWRYQQALYNNDSDL-PEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQ 239
                  +Y ++S   P     G Y++    +   + + +L++  +        ++    
Sbjct: 65  ------GIYPDESIFNPNDQKYGKYMQSQKFDRYKQLAEQLVDQNKAYRCFCTSEELEKD 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +  +  +     Q  +F+++D         I+  ++N       Y      PK+KT 
Sbjct: 119 YEDQTSKGIIATKYSQKCLFLTQDQ--------IQKNLENKKE----YSIRFKVPKNKTW 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  + F S  +GD     +LKS+G  TY   + A     Y+    +++   G +
Sbjct: 167 TINDIVRGDVSFDSKDLGDF---VILKSNGVATY---NFAVVVDDYDMQITHVLR--GEE 218

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R   +  A +             + L  D    K+SKR+G+ +       + G 
Sbjct: 219 HISNTPRQMMIYDAFNWNYPMFGH-----LTLIVDNTGKKLSKRSGNALFFIEQYKKQGY 273

Query: 420 --------------------------DSVRFMMLWRKNSELLDFDFCKVK 443
                                     + ++     R +     FD  K+K
Sbjct: 274 LSQAIFNYIALLGWSPPGEQEILSQNELIKIFDEKRFSKSPSTFDMVKMK 323


>gi|317121723|ref|YP_004101726.1| isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591703|gb|ADU50999.1| Isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 946

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     A A   +     VL    V    DG   KMSK  G+ +   
Sbjct: 552 LYLEGSDQHRGWFQSSLLTAVATRGQAPYRAVLTHGFVV---DGEGRKMSKSLGNVVDPN 608

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R   +       +      +K+ ++          Y + R+  R     
Sbjct: 609 DVIRRYGADVLRLWAVSSDYRGDVRISEDILKQMAEI---------YRKIRNTLRFLLGN 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D     R+ +  +   +     L   LA+    +  A    + + L
Sbjct: 660 LGDFD---PARDAVAYDQLPELDRWALAR-LAQVTERVRRAYDEYQYHVL 705


>gi|227544234|ref|ZP_03974283.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908230|ref|ZP_07125696.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185787|gb|EEI65858.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894657|gb|EFK88013.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 907

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 102/358 (28%), Gaps = 66/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 34  DPAAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 93

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+  
Sbjct: 94  KRMQGYDVL-------WVPGMDHAGIATQAKVEARLRK----------QGISRYDLGR-- 134

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  ++ ++ +E                II      + I  D          G    +
Sbjct: 135 -DKFVQQVWDWKDE-------------YADIIHQQWAKMGISVDYDHERFTLDEGLNKAV 180

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +  +L  +G +Y G          +    D +  +      G         +DG+ T+
Sbjct: 181 RKVFVDLYNKGLIYRGTYIINWDPQARTALSDIE--VIHKDDKGAFYHVKYPFTDGT-TF 237

Query: 334 FAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D +     + E  F                          ++   +N        L 
Sbjct: 238 NGKDYIEIATTRPETMF-------------------------GDEAVAVNPNDERYKDLV 272

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              + + +  R  + I   +V  E G+  V+         +  DF   K     + N 
Sbjct: 273 GKKVMVPLVNREIEIIADDYVTPEFGTGMVKI----TPAHDPNDFKVGKRHNLPELNT 326


>gi|149021523|ref|ZP_01835578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930219|gb|EDK81204.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAIAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|148992322|ref|ZP_01822045.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488257|ref|ZP_02712456.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147928948|gb|EDK79960.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183573136|gb|EDT93664.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332074380|gb|EGI84856.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|225860574|ref|YP_002742083.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229933|ref|ZP_06963614.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255643|ref|ZP_06979229.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502363|ref|YP_003724303.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|225728073|gb|ACO23924.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237958|gb|ADI69089.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390309|gb|EGE88650.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|322382808|ref|ZP_08056652.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153277|gb|EFX45723.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 659

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 105/324 (32%), Gaps = 36/324 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD LA      GY+V      ++ G +I   A       Q  + N
Sbjct: 17  PSDKLHIGHAYTTVAGDALARYKRLRGYDVMYLTGTDEHGQKIERKAKEKGMTPQAFVDN 76

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--VKDYSVQAMMKI 244
             + + E           +++       +  S       E+  + +   + +   +    
Sbjct: 77  IVAGIKELWGKMDISYDDFIRTTEDRHKESVSVIFARLMEQGDIYLGEYEGWYCTSCESF 136

Query: 245 IRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLARQGYVYE------GILPP 293
             ++  A     D       + E+ +          ++          +       ++  
Sbjct: 137 FPENKLADGKCPDCGGPVEKMKEESYFFRMSKYADRLLQYYEENPDFIQPESRKNEMINN 196

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM- 352
                 +   + R    +   +  D      +  D    Y +A L Y   K    FD   
Sbjct: 197 FIKPGLEDLAVSRATFDWGVKVPNDPKHVIYVWIDALSNYISA-LGY-GTKDSSKFDKYW 254

Query: 353 ---IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              ++++G +    H+ Y      +  A+     +   +      L +DG   KMSK  G
Sbjct: 255 PADVHLVGKEIIRFHTIY---WPIMLMAMGLPLPKK--VFGHGWLLMKDG---KMSKSKG 306

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +    ++D  G D++R+ +L  
Sbjct: 307 NVVDPVTLIDRYGLDALRYFLLRE 330


>gi|290893953|ref|ZP_06556929.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556491|gb|EFD90029.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 57/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +    +             E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKEENISRYDLGR--EKFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 37.6 bits (86), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           L RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 519 LVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|169832567|ref|YP_001694056.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995069|gb|ACA35681.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|149012557|ref|ZP_01833554.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763362|gb|EDK70299.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|295425100|ref|ZP_06817805.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065159|gb|EFG56062.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 890

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 35/237 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 20  NPNEVEKGRYQKWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L     D                  
Sbjct: 80  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARLREQGID------------------ 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        EK+L  V ++       II+     + +  D         +G    +
Sbjct: 115 -------RHQLGREKFLKQVWEWK-DEYANIIKGQWAKMGLSLDYSRERFTLDKGLSKAV 166

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           R +   L  +G +Y G          +    D +  +      GD         DGS
Sbjct: 167 RKVFVQLYNEGLIYRGEYIINWDPKLETALSDIE--VIHKDDKGDFYHIKYPFVDGS 221



 Score = 37.6 bits (86), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 18/101 (17%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +             ++   +V+L     L RD    KMSK 
Sbjct: 491 TGYD-IIFFWVSRMIFQSLHFTH----------ERPFKDVVLHG---LMRDPQGRKMSKS 536

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ +    VV++ G D++R+ +L      +   +D  K+ 
Sbjct: 537 LGNGVDPMDVVNKYGCDALRWFLLNGTAPGQDTRYDPKKLS 577


>gi|225856278|ref|YP_002737789.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225724382|gb|ACO20234.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|148983947|ref|ZP_01817266.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147924094|gb|EDK75206.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799625|emb|CBW32180.1| valyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 883

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|138893762|ref|YP_001124215.1| glutamyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200178|sp|A4IJG6|SYE_GEOTN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|134265275|gb|ABO65470.1| Transfer RNA-Gln synthetase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 489

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 101/292 (34%), Gaps = 29/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D    +     S     +  
Sbjct: 10  APSPTGHLHIGGARTALFNYLFAR---HYGGKMVVRIEDTDIERNVEGGEESQLENLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  + +    G Y +    ++  KY +ELL           K +     ++  R++
Sbjct: 67  GIDYDESIDKDGGYGPYRQTERLDIYRKYVNELLEQG-----HAYKCFCTPEELEREREE 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A  I    +  +            + +  L  QG  Y   L  P+ KT +  D+ R +
Sbjct: 122 QRAAGIAAPQYSGKC------RHLTPEQVAELEAQGKPYTIRLKVPEGKTYEVDDLVRGK 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F S  +GD     ++K++G  TY FA  +     +    F       G +H     + 
Sbjct: 176 VTFESKDIGDW---VIVKANGIPTYNFAVVIDDHLMEISHVFR------GEEHLSNTPKQ 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             V      +  Q   +      L  +    K+SKR    I       E+G 
Sbjct: 227 LMVYEYFGWEPPQFAHM-----TLIVNEQRKKLSKRDESIIQFVSQYKELGY 273


>gi|313898937|ref|ZP_07832464.1| hypothetical protein HMPREF9406_1852 [Clostridium sp. HGF2]
 gi|312956136|gb|EFR37777.1| hypothetical protein HMPREF9406_1852 [Clostridium sp. HGF2]
          Length = 40

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           + +     KL+  RL L+ A    + + L +IGV++  +M
Sbjct: 1   KVIDPQQPKLSSQRLALLKATKITLKNALYLIGVDAIEKM 40


>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 962

 Score = 55.3 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 126/377 (33%), Gaps = 86/377 (22%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL   EE KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 456 EAFRKELLQAVEETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 510

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +G + EG   P       + + D   + F S
Sbjct: 511 DPIITDETINHVADLFRENGSNVWFEREAKGLLPEGFTHPSSPNGEFRKETDIMDVWFDS 570

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 571 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 610

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 611 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 667

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR    +    DF+     V   E    
Sbjct: 668 SDVRISDDILKQVAE---------VYRKIRNTFRFL--LGNLADFNPSQDAVAKAELREV 716

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHWSHGRE 541
                    L +   +I     A E        YD A+V+H             +     
Sbjct: 717 DR-----YMLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFY--LDF 762

Query: 542 NPRLRFVQANNRKLTMM 558
              + +++A N      
Sbjct: 763 AKDILYIEAENHHDRRA 779


>gi|297616869|ref|YP_003702028.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144706|gb|ADI01463.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 884

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 56/190 (29%), Gaps = 34/190 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        G    R    +     +     N TG +H+GH     + D LA      GY
Sbjct: 19  KWYQYWTEKGYFTPRVDASRPRFSMV-IPPPNVTGSLHLGHALNNTLQDILARWRRMQGY 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                          +   ++   R +++L                     +E   KY  
Sbjct: 78  NTL-------WLPGTDHAGIATQARVEESL--------------------AQEGLSKY-- 108

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +   E++L  V  +      KII   LK L    D          G    ++++   
Sbjct: 109 ---DLGRERFLERVWAWKNTYGDKIISQ-LKMLGCSCDWSRERFTMDEGCSEAVKEVFVR 164

Query: 280 LARQGYVYEG 289
           L  +G +Y G
Sbjct: 165 LYEKGLIYRG 174



 Score = 37.6 bits (86), Expect = 6.3,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L  D +  KMSK  G+ I    V+D+ G+D++RF ++        + F + KV E ++  
Sbjct: 519 LILDALGRKMSKSLGNGIDPIDVIDKYGADTLRFSLITGSTPGNDIRFHWEKV-ENTRNF 577

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
                  A     ++         + D+ L  R ++ +  E      +L+    L E  R
Sbjct: 578 ANKIWNAARFVVMNLDDFEHITLEEKDYTLADRWILSRLQEKIEQVTELLQSYDLGEAAR 637

Query: 508 VIEN-ATIAQEPYKLAFYLYDLAS 530
           V+ +             +  +LA 
Sbjct: 638 VLYDFVWDEF-----CDWYIELAK 656


>gi|95930108|ref|ZP_01312847.1| valyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133802|gb|EAT15462.1| valyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 886

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 79/270 (29%), Gaps = 45/270 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  K   +   +G  +      K     +     N TG +H+GH     + D LA   
Sbjct: 12  HDFETKWYQTWEENGYFHADENSDKPPYSIV-IPPPNVTGVLHMGHALNNTMQDILARWK 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +G+EV                           L+   +D        V  K +  E  
Sbjct: 71  RMTGHEV---------------------------LWMPGTDHAGIATQNVVEKQLASEDK 103

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++     +   + ++  V  +  ++  +II   LK L    D          G    +R
Sbjct: 104 DRH-----DVGRDAFIERVWQWREESGGQIINQ-LKRLGASCDWQRERFTMDDGLSKAVR 157

Query: 275 DIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPLL 325
           ++  +L  +G +Y                S    + D  +  L   R  + G D    + 
Sbjct: 158 EVFVSLYEEGLIYRDNRLINWCPRCHTALSDLEVEHDDKKGNLWHLRYPVKGTDQVLVVA 217

Query: 326 KSDGSYTYFAADLAYFKC--KYERGFDNMI 353
            +          +A      +Y      MI
Sbjct: 218 TTRPETMLGDTAVAVHPDDERYADLVGKMI 247



 Score = 38.4 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +      +    +V +  LV   RD    KMSK  G+ I    V+DE G+D+ 
Sbjct: 492 WVARMMMMGLKFMGEVPFKDVYIHALV---RDAQGQKMSKSKGNVIDPLTVIDEFGTDAF 548

Query: 423 RFMM 426
           RF +
Sbjct: 549 RFTL 552


>gi|289523084|ref|ZP_06439938.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503627|gb|EFD24791.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 895

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 33/197 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L +           +   +       +I     N TG +H+GH     + D +    
Sbjct: 14  PEELERKWYDWWQDRGLFHAEVDETKEPFSIVIPPPNVTGSLHMGHALNNTLQDIVCRYK 73

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+ V      + AG     +                               V +ELA
Sbjct: 74  RMKGFNVMWIPGTDHAGIATQNV-------------------------------VERELA 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K   +  +   E +L  V ++  +   +II   LK L    D          G    +R
Sbjct: 103 KK-GIDRKDMTREAFLEKVWEWKSEYGGRIISQ-LKRLGASCDWDRERFTMDEGLSKAVR 160

Query: 275 DIIDNLARQGYVYEGIL 291
            +   L ++G +Y+G  
Sbjct: 161 AVFVRLYKEGLIYKGKY 177



 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +     +V +  LV   RD    KMSK  G+
Sbjct: 487 TGFD-IIFFW-------VARMIMMGLKFMDDVPFKDVYIHALV---RDEKGQKMSKSKGN 535

Query: 407 FITLRHVVDEVGSDSVRFMMLW 428
            I    ++++ G+DS+RF +  
Sbjct: 536 VIDPVDIINQYGADSLRFTLSS 557


>gi|148990086|ref|ZP_01821340.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924612|gb|EDK75699.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|291547427|emb|CBL20535.1| methionyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 659

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 118/386 (30%), Gaps = 53/386 (13%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +  +  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MEKQRYYISTAIAYTSGKPHIGNTYEVVLADAIARFKRQQGYDVYFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ + N   ++         +  +     DK+        EE+   I K   
Sbjct: 61  AEEAGVTPKEFVDNVSGEIK-------RIWDLMNTSYDKFIRTTDKDHEEQVKKIFKK-- 111

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNL 280
           + A   I +   + +     + F +E     G                    +    D L
Sbjct: 112 MYAKGDIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPCVPAKEEAYFFKMSKYADKL 171

Query: 281 ARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                 +   + P   K            Q   + R    +   +  D      +  D  
Sbjct: 172 IDYINTHPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDAL 231

Query: 331 YTYFAADLAY-----FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQIN 382
             Y    + Y        K+ + +   ++++G D    + R   +      +S       
Sbjct: 232 TNYITG-IGYDCDGNSSDKFNKYWPADLHLIGKD----IIRFHTIYWPIFLMSLDLPLPK 286

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
            +      L  DG   KMSK  G+ I    +V+  G D+VR+ +L            +  
Sbjct: 287 QVFGHPWLLQGDG---KMSKSKGNVIYADELVEFFGVDAVRYFVLHEMPFENDGVITWEL 343

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQ 467
           + E+   +    +     R  S+  +
Sbjct: 344 MVERLNSDLANTLGNLVNRTISMSNK 369


>gi|182683501|ref|YP_001835248.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303255236|ref|ZP_07341309.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260058|ref|ZP_07346031.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261242|ref|ZP_07347190.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263907|ref|ZP_07349828.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267057|ref|ZP_07352928.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269272|ref|ZP_07355046.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|182628835|gb|ACB89783.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301801447|emb|CBW34135.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597777|gb|EFL64850.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637376|gb|EFL67863.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638753|gb|EFL69215.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641169|gb|EFL71542.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643385|gb|EFL73661.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646312|gb|EFL76538.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|331701260|ref|YP_004398219.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128603|gb|AEB73156.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 886

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 13  DPTAVEKGRYDEWLDEGVFTPSGDKKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRR 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L                        
Sbjct: 73  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      + I++    L +  D         +G    +
Sbjct: 102 -RKQGISRYDLGREKFVEKVWEWKDD-FARTIKEQWAKLGLSLDYSRERFTLDKGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 160 RKVFVTLYNKGLIYRGEYIINWDPQARTALSD 191



 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 52/231 (22%)

Query: 363 YVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           +      +  ++     +   +VLL  L+   RD    KMSK  G+ I    V+D+ G+D
Sbjct: 494 FFWVSRMIFQSLEFTHERPFKDVLLHGLI---RDSQGRKMSKSLGNGIDPMDVIDKYGAD 550

Query: 421 SVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           ++R+ + +     + L F + K+              A+     I+  ++ +  +LD   
Sbjct: 551 ALRWFLSIGGTPGQDLKFSYDKMDS------------AWNFINKIWNASRYVIMNLDG-- 596

Query: 480 FPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQ------EPYKLAFYLYD-LAS 530
                I +    D SE QL     L+     + + +         E  +   YLYD + +
Sbjct: 597 -----IDKPELPDKSEWQLSDKWILSRLNATVNHVSDLFEKYNFGEADR---YLYDFIWN 648

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN----SGLNII 577
            F   +           + +++ KL            +I+       L ++
Sbjct: 649 DFCDWY----IEMSKEALNSDDEKLK-------KNTQNILAYVLDQTLRLL 688


>gi|221231401|ref|YP_002510553.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|220673861|emb|CAR68364.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|168492725|ref|ZP_02716868.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225854110|ref|YP_002735622.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|183577078|gb|EDT97606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225723634|gb|ACO19487.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|168482808|ref|ZP_02707760.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043865|gb|EDT51911.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332203734|gb|EGJ17801.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|165872552|ref|ZP_02217184.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|227812711|ref|YP_002812720.1| methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254756363|ref|ZP_05208392.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|164711680|gb|EDR17225.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|227004168|gb|ACP13911.1| methionine--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 660

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 113/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY V      ++ G +I         +  + L  
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKI--------QKKAEELNV 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +    G  +K +  E  D    + +   E++   +V+        KI +  +  
Sbjct: 69  TPQAYVDNIVAG--IKEL-WEKMDISCDDFIRTTEDRHKDVVE--------KIFKQLVDQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +     V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           R   +G  VDR L   + +  +                    DLA  +  ++ G      
Sbjct: 175 R---MGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGN 231

Query: 349 FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLRE 340


>gi|149369356|ref|ZP_01889208.1| glutamyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356783|gb|EDM45338.1| glutamyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 509

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 106/304 (34%), Gaps = 41/304 (13%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTR 163
            +N+I    KV + F + +PTGP+H+G  R A+          GD +  +      +  +
Sbjct: 1   MKNIIFMSQKVRVRF-APSPTGPLHIGGVRTALFNYLFAKKHGGDFILRI-----EDTDQ 54

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
             Y+  A   I          +    ++     P     G Y +   K+L  KY+ +LL+
Sbjct: 55  TRYVEGAEDYIVEAM-----NWLNIPFDESPLKPANC--GPYRQSERKDLYVKYAQDLLD 107

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLAR 282
                +      +     +   R D +A      I+   +     +   + +  +     
Sbjct: 108 SGNAYY-----AFDTAEALDAHRKDHEANGKTF-IYNWHNRLKLDNSLVLSEAEVKQKIA 161

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G  Y      P  +T    D+ R  +   + ++    D+ L KSDG  TY    LA   
Sbjct: 162 DGEPYVIRFKAPVGETLHLKDIIRGGITIDTNLLD---DKVLFKSDGMPTYH---LANIV 215

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +     ++I   G +    +     +  A      Q   L   +  + +     K+SK
Sbjct: 216 DDHLMEISHVIR--GEEWLPSMALHVLLYRAFGWDAPQFAHLPLIMKPVGKG----KLSK 269

Query: 403 RAGD 406
           R GD
Sbjct: 270 RDGD 273


>gi|260663368|ref|ZP_05864259.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552220|gb|EEX25272.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 884

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + +      +    +  +   K    +I     N TG +H+GH     + D + 
Sbjct: 9   KFDPQAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMII 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+V            ++   ++   + +  L                      
Sbjct: 69  RQKRMQGYDVL-------WLPGMDHAGIATQAKVEARL---------------------- 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   EK++  V D+       II      + I  D          G   
Sbjct: 100 ---AKQGVSRYDLGREKFVKQVWDWK-DEYAAIIHQQWAKMGISVDYDRERFTLDEGLNK 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +R +  +L  +G +Y            +    D
Sbjct: 156 AVRKVFVDLYNKGLIYRATYIINWDPKARTALSD 189


>gi|126654257|ref|ZP_01726045.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           B14905]
 gi|126589290|gb|EAZ83448.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           B14905]
          Length = 658

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 103/332 (31%), Gaps = 52/332 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  D +A      GY+V     +++ G +I   A        +   +
Sbjct: 17  PSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQEKAAEA----GKHPQD 72

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +++ E       L  +  +   + + E      EK      D        I + + + 
Sbjct: 73  YVNEIAEAAKKLWALMDISYDDFIQTTQERHTKAVEKIFQKFLDNG-----DIYKGEYEG 127

Query: 252 LNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGILPPP 294
                 + F +E     G+                   ++   D L        G + P 
Sbjct: 128 WYCTPCESFFTETQLVDGNCPDCGRPVHKVKEESYFFNMKKYADRLLSYYEENLGFIEPE 187

Query: 295 KSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
             K            +   + R    +   + GD      +  D    Y  + L Y    
Sbjct: 188 SRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNYITS-LGYLSD- 245

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
            E  F+      ++V+G D    + R   +      ++        +      + +DG  
Sbjct: 246 DETLFNKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKDG-- 299

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            KMSK  G+ I    +++  G D+ R+ +L  
Sbjct: 300 -KMSKSKGNVIYPEMLIERYGLDATRYFLLRE 330


>gi|15900480|ref|NP_345084.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657453|ref|ZP_01408202.1| hypothetical protein SpneT_02001347 [Streptococcus pneumoniae
           TIGR4]
 gi|81532202|sp|Q97S45|SYV_STRPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14972043|gb|AAK74724.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  NL ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|254362283|ref|ZP_04978396.1| valine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093860|gb|EDN74792.1| valine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 954

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L     S   +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|138893709|ref|YP_001124162.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265222|gb|ABO65417.1| Methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 650

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 108/336 (32%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GDTLA      GY+V            +         +  Q    
Sbjct: 15  PSDKLHIGHAYTTVAGDTLARYKRMRGYDV------------MYLTGTDEHGQKIQRKAE 62

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIRDD 248
                P+ Y   +        +  D    + +   +E+   +V+    +      I   +
Sbjct: 63  EKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLGE 122

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  Q Y +       +     + + D  
Sbjct: 123 YEGWYCTPCESFYTERQLVDGNCPDCGRPVEKVKEQSYFFRMSKYVDRLLQYYEENPDFI 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q   R   + ++  +P             DLA  +  ++ G        ++IYV      
Sbjct: 183 QPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALA 232

Query: 357 --------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                   G+D+    ++   A    V ++  + + +   ++ +  D             
Sbjct: 233 NYITALGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWL 292

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 293 LMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 328


>gi|145639009|ref|ZP_01794617.1| valyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145271981|gb|EDK11890.1| valyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750969|gb|ADO80953.1| Valyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 954

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|323694557|ref|ZP_08108723.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323501325|gb|EGB17221.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 879

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 78/270 (28%), Gaps = 41/270 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPADIEERLYQKWLDSKYFHAEVNKNKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+                           +AL+   +D          +  +  
Sbjct: 67  RYKRMQGF---------------------------EALWQPGTDHAAIATEVKVIDKLKS 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK+     +   +K+L    ++      +I++  L  L    D          G   
Sbjct: 100 EGIDKH-----DLGRDKFLEKAWEWKEDYGSRIVKQ-LHKLGSSADWDRERFTMDEGCSD 153

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            + ++   L  +GY+Y+G        I     S    + +         +  +  + DR 
Sbjct: 154 AVLEVFTKLYEKGYIYKGSRIINWCPICQTSISDAEVEHEEQDGFFWHINYPIVGEEDRF 213

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           +  +         D A      +  +  +I
Sbjct: 214 VEIATTRPETMLGDTAVAVNPEDDRYKELI 243


>gi|289641290|ref|ZP_06473456.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
           Datisca glomerata]
 gi|289508888|gb|EFD29821.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
           Datisca glomerata]
          Length = 879

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 64/186 (34%), Gaps = 37/186 (19%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++ GSD+VR+     +      FD  ++K          
Sbjct: 605 DPDRKKMSKSKGNVVTPLDLLEQHGSDAVRYWAASGRPGTDTTFDVGQMKIGR------- 657

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                       R A  +     F L    V    +  +  +  L+  LA    V+++A+
Sbjct: 658 ------------RLAIKLLNASRFALGLGAVEDAGTVGEPLDRALLATLA---EVVDSAS 702

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRLRFVQA----NNRKLTMMRLQLVHA 565
            A +      Y      +L   F   W    +   L   +A            R  L  A
Sbjct: 703 TALD-----NYDYTRALELTESF--FWRFCDDYVELVKGRAYGSFGEPGAASARATLAIA 755

Query: 566 VASIIN 571
           +++++ 
Sbjct: 756 LSTVLA 761


>gi|118443167|ref|YP_877806.1| valyl-tRNA synthetase [Clostridium novyi NT]
 gi|118133623|gb|ABK60667.1| valyl-tRNA synthetase [Clostridium novyi NT]
          Length = 879

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 63/247 (25%), Gaps = 45/247 (18%)

Query: 89  INL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +N+     P      L         +   +        I     N TG +H+GH     +
Sbjct: 4   VNIAKTYDPKEFEDKLYEKWEQKGYFTPEIDKTKKPYTIMMPPPNITGQLHLGHALDGTL 63

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L       GY                    S  W                  PG   
Sbjct: 64  QDFLIRTKRMQGY--------------------STLW-----------------LPGEDH 86

Query: 207 KHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             +  E+  +               E +L  V D++ +     I+   + L I  D    
Sbjct: 87  ASIATEVKVEKSLLEQGLHKKEMGREAFLEKVWDWAYKY-RDRIKTQYQKLGISADYTRE 145

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 G    +R +   L  +G +Y+G          Q    D +            + 
Sbjct: 146 RFTMDEGLNKAVRKVFVELYNEGLIYKGNRIVNWCPKCQTAISDAEIEYEEQNGHFWHIK 205

Query: 322 RPLLKSD 328
            P++ SD
Sbjct: 206 YPVVGSD 212



 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 94/251 (37%), Gaps = 44/251 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +            +   S KK   N +L   +   
Sbjct: 471 TEDLEYFYPTNTLVTGYD-IIFFWVAR--------MIFSGLHSMKKIPFNTVLIHGI--V 519

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+++ G+D++RFM++        D  + + K ++  N   
Sbjct: 520 RDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGN-DIRYYEEKVEAARN--- 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
                      I+  ++ +  +LD DL        E   D  E  L     L+    V++
Sbjct: 576 -------FANKIWNASRFVMMNLDKDLM-------EKYKDCKEYTLADKWILSRINTVVK 621

Query: 511 NATI---AQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            AT      E    A  +YD + + F   +           +  ++ K   + L +++  
Sbjct: 622 EATENIDKFELGIAAQKIYDFMWNEFCDWY----IELVKPALYGDDEKAKGVVLNVLN-- 675

Query: 567 ASIINSGLNII 577
             ++  GL ++
Sbjct: 676 -EVLKKGLKLL 685


>gi|168187608|ref|ZP_02622243.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294536|gb|EDS76669.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 879

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 57/217 (26%), Gaps = 49/217 (22%)

Query: 78  VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137
           ++ V IA         +P      L         +   +        I     N TG +H
Sbjct: 1   MEEVNIAK------TYNPKEFEDKLYEKWEQKGYFTPEVDKSKKPYTIMMPPPNITGQLH 54

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH     + D L       GY                    S  W              
Sbjct: 55  LGHALDGTLQDVLIRTKRMQGY--------------------STLW-------------- 80

Query: 198 EGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
               PG     +  E+  +               E +L  V D++ +     I+   + L
Sbjct: 81  ---LPGEDHASIATEVKVEKSLLEQGLHKKEMGREAFLEKVWDWAYKY-RDRIKTQYQKL 136

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            I  D          G    +R +   L  +G +Y+G
Sbjct: 137 GISADYTRERFTMDEGLNKAVRKVFVELYNEGLIYKG 173



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 33/207 (15%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           KK   + +L   +   RD    KMSK  G+ +    V+++ G+D++RFM++        D
Sbjct: 506 KKIPFDTVLIHGI--VRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGN-D 562

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
             + + K ++  N              I+  ++ +  +LD DL        E   D  E 
Sbjct: 563 IRYYEEKVEAARN----------FANKIWNASRFVMMNLDKDLM-------EKYKDCKEY 605

Query: 497 QLIVH--LAEYPRVIENATI---AQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQA 550
            L     L+    V++ AT      E    A  +YD + + F   +           +  
Sbjct: 606 TLADKWILSRINTVVKEATENIDKFELGIAAQKIYDFMWNEFCDWY----IELVKPALYG 661

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNII 577
           ++ K   + L +++    ++  GL ++
Sbjct: 662 DDEKAKGVVLNVLN---EVLKKGLKLL 685


>gi|16803592|ref|NP_465077.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501508|ref|ZP_03669815.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508987|sp|Q8Y6X9|SYV_LISMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16410981|emb|CAC99630.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 883

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.7,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|242373956|ref|ZP_04819530.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348310|gb|EES39912.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 887

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 54/191 (28%), Gaps = 34/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 25  AGRYEEWVKNGYFKPSEDKSKDTYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 83

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 84  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDLGRDKFLEQAWDWKEEYA 134

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    +R +  
Sbjct: 135 S------------------------FIRQQWAKLGLGLDYSRERFTLDEGLSKAVRKVFV 170

Query: 279 NLARQGYVYEG 289
           +L  +G +Y G
Sbjct: 171 DLYNKGIIYRG 181



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 32/171 (18%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       ++++   +VLL  LVR   DG   KMSK  G+
Sbjct: 490 TGYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--KMSKSLGN 538

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    V+DE G+DS+R+ +                   +  +P   ++Y+  +  S++ 
Sbjct: 539 GVDPMDVIDEYGADSLRYFL------------------ATGSSPGHDLRYSTEKVESVWN 580

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVH--LAEYPRVIENATI 514
               I+    F L       +  + D S EL L     L      I+  T 
Sbjct: 581 FINKIWNAARFSLMNIGEDFKVEDIDLSGELSLADKWILTRLNETIKTVTE 631


>gi|209966833|ref|YP_002299748.1| isoleucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960299|gb|ACJ00936.1| isoleucyl-tRNA synthetase IleS [Rhodospirillum centenum SW]
          Length = 962

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 100/296 (33%), Gaps = 41/296 (13%)

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD--DVDRPLLKSDGSYTYFAAD 337
           L R G ++E               +      +         D+     +S  ++ +   D
Sbjct: 516 LERIGAIFEAEGSDSWYSRPPADFLGDG---YDPDEFEQVFDIVDVWFESGSTHAFVLED 572

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDG 395
               + + +R  D  +Y+ GSD   G+      +  +   + +A    +L     L ++G
Sbjct: 573 ----RPELKRPAD--LYLEGSDQHRGWFHSS--LLESCGTRGRAPYEAVLTHGFTLDQNG 624

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  + V+ E G+D +R  ++    +E              +     + 
Sbjct: 625 E--KMSKSKGNTVAPQDVIKEFGADILRLWVVSTDFTED-------------QRIGPKIL 669

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
            A A      R           D      +P  +E    E  ++  LAE    +  +   
Sbjct: 670 QAQADLYRRLRNTLRYLLGALADWTEAERLPA-AEMPELERWVLHRLAEMDGAVRQSIAD 728

Query: 516 QEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            + ++LA  L++  +      +   R++         +R  ++ R     A  +++
Sbjct: 729 YDLHRLATELHNFCAVDLSAFYFDVRKDSLYC-----DRPDSVRR----RATRTVM 775


>gi|323487048|ref|ZP_08092357.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum
           WAL-14163]
 gi|323399639|gb|EGA92028.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum
           WAL-14163]
          Length = 879

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 78/270 (28%), Gaps = 41/270 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPADIEERLYQKWLDSKYFHAEVNKNKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+                           +AL+   +D          +  +  
Sbjct: 67  RYKRMQGF---------------------------EALWQPGTDHAAIATEVKVIDKLKS 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK+     +   +K+L    ++      +I++  L  L    D          G   
Sbjct: 100 EGIDKH-----DLGRDKFLEKAWEWKEDYGSRIVKQ-LHKLGSSADWDRERFTMDEGCSD 153

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            + ++   L  +GY+Y+G        I     S    + +         +  +  + DR 
Sbjct: 154 AVLEVFTKLYEKGYIYKGSRIINWCPICQTSISDAEVEHEEQDGFFWHINYPIVGEEDRF 213

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           +  +         D A      +  +  +I
Sbjct: 214 VEIATTRPETMLGDTAVAVNPEDDRYKELI 243


>gi|239825670|ref|YP_002948294.1| glutamyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805963|gb|ACS23028.1| glutamyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 486

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 41/298 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R        +Q+  L     
Sbjct: 10  APSPTGHLHIGGARTALFNYLFARHHNGKFIVRIEDTDIER-NVEGGEQSQLENLKWL-- 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++S   +G Y G Y +    ++  KY +ELL           K +     +
Sbjct: 67  -----GIDYDESVDKDGGY-GPYRQTERLDIYRKYVNELLEKG-----YAYKCFCTPEEL 115

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R+  +   I    +  +           ++ +  L  +G  Y   +  P+ K  +  
Sbjct: 116 EKEREAQRTAGIAAPQYSGKC------RHLTKEQVAQLEAEGKPYTIRVKVPEGKVYEFE 169

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D+ R ++ F S  +GD     ++K++G  TY FA  +     K    F       G +H 
Sbjct: 170 DIVRGKVTFESKDIGDW---VIMKANGIPTYNFAVVIDDHLMKITHVFR------GEEHL 220

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +   +      +  +        + L  +    K+SKR    I       E+G 
Sbjct: 221 SNTPKQLMIYDYFGWEPPKFAH-----LTLIVNENRKKLSKRDESIIQFVSQYKELGY 273


>gi|254828213|ref|ZP_05232900.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600602|gb|EEW13927.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|312870463|ref|ZP_07730583.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094020|gb|EFQ52344.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 102/358 (28%), Gaps = 66/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  DPSAVETGRYQWWIDQGLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+E 
Sbjct: 70  KRMQGYDVL-------WIPGMDHAGIATQAKVEARLRK----------QGISRYDLGRE- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ +E                II      + I  D          G    +
Sbjct: 112 --KFVQQVWDWKDE-------------YADIIHQQWAKMGISVDYDRERFTLDEGLNKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +  +L ++G +Y G          +    D +  +      G         +DG+ T+
Sbjct: 157 RKVFVDLYKKGLIYRGTYIINWDPQARTALSDIE--VVHKDDQGAFYHVKYPFTDGT-TF 213

Query: 334 FAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D +     + E  F                          ++   ++        L 
Sbjct: 214 NGKDYIEIATTRPETMF-------------------------GDEAVAVHPDDERYKELV 248

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              + + +  R  + I   +V  + G+  V+         +  DF   K     + N 
Sbjct: 249 GKKVKVPLVDREIEIIADEYVTPDFGTGMVKI----TPAHDPNDFKVGKRHNLPELNT 302



 Score = 38.7 bits (89), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 18/125 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+ + G D++R+ ++      + + F + K+       
Sbjct: 519 LIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRWFLITGSTPGQDIRFSYIKMDA----- 573

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  A+     I       +  ++    P  V+P + ++D ++  +   L+     I
Sbjct: 574 -------AWNFINKI--WNASRYVIMNLGEMPAPVLPAKEKWDLADRWI---LSRLNATI 621

Query: 510 ENATI 514
           E  T 
Sbjct: 622 EQVTE 626


>gi|301793771|emb|CBW36159.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204591|gb|EGJ18656.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYSTTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAY--------FKCKYERG-----FDNMIYVMGSDHS 361
           +         D+A         +K    +       + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIANKLIPIVGDEHA 264


>gi|282856769|ref|ZP_06266030.1| valine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585392|gb|EFB90699.1| valine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 901

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ L +      +    +   +  +    +I     N TG +H+GH       D LA
Sbjct: 11  TYDPAPLEEKWYQWWLDQNLFDAKIDPEKKAFSIVLPPPNVTGALHMGHAYDHTFQDILA 70

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                    SV W            LP   + G+  ++V +
Sbjct: 71  RYKRARGY--------------------SVLW------------LPGTDHAGIATQNVVE 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K  +       E ++    ++  +     I + +K+L    D          G   
Sbjct: 99  RRLAKEGTSRRALGREAFVKRTWEWK-EEYRDRIVNQMKSLGDSCDWKRERFTMDEGLSK 157

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R +   L  +G +Y+G
Sbjct: 158 AVRTVFCRLYEKGLIYKG 175


>gi|196250752|ref|ZP_03149439.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209702|gb|EDY04474.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 650

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 108/336 (32%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GDTLA      GY+V            +         +  Q    
Sbjct: 15  PSDKLHIGHAYTTVAGDTLARYKRMRGYDV------------MYLTGTDEHGQKIQRKAE 62

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIRDD 248
                P+ Y   +        +  D    + +   +E+   +V+    +      I   +
Sbjct: 63  EKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLGE 122

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  Q Y +       +     + + D  
Sbjct: 123 YEGWYCTPCESFYTERQLVDGNCPDCGRPVEKVKEQSYFFRMSKYVDRLLQYYEENPDFI 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q   R   + ++  +P             DLA  +  ++ G        ++IYV      
Sbjct: 183 QPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALA 232

Query: 357 --------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                   G+D+    ++   A    V ++  + + +   ++ +  D             
Sbjct: 233 NYITALGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWL 292

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 293 LMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 328


>gi|261492803|ref|ZP_05989350.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494831|ref|ZP_05991309.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309542|gb|EEY10767.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311485|gb|EEY12641.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 948

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L     S   +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   RFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|186686227|ref|YP_001869423.1| DALR anticodon binding domain-containing protein [Nostoc
           punctiforme PCC 73102]
 gi|186468679|gb|ACC84480.1| DALR anticodon binding domain protein [Nostoc punctiforme PCC
           73102]
          Length = 189

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 38/160 (23%)

Query: 449 NPVFYVQYAYARCRSI-----------FRQAKDIFPDLDFDLFPRNVIP------QESEF 491
           N +F VQ+A+ARC S+            +Q         +D+   N +P           
Sbjct: 39  NSLFAVQHAHARCCSLVLLAHREGLIKLKQPVTNTSQGFWDVISPNPLPWLNCDATLRLN 98

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYK--------LAFYLYDLASVFHGHWSHGRENP 543
              E +LI  L +    IE+      P          LA    +L+  F   WS+ R   
Sbjct: 99  HPGERRLIAELIQVVDNIES------PDIKGSVKWEKLA---LNLSQAFEHFWSNCRIWG 149

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGL-NIIGVESP 582
            ++ +     +L   RL L+ A  S++   L   +GV +P
Sbjct: 150 EVKAIL---PELAQARLGLLMATQSVLRYVLEEKLGVFAP 186


>gi|47096717|ref|ZP_00234302.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898281|ref|ZP_05258205.1| valyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912226|ref|ZP_05262238.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936554|ref|ZP_05268251.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014901|gb|EAL05849.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609148|gb|EEW21756.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590201|gb|EFF98535.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|261867750|ref|YP_003255672.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413082|gb|ACX82453.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 954

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSEEANAPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A + +    ++  E ++  + ++  Q+    I   ++ L    D          G   
Sbjct: 99  KIAAEENKTRHDYGREAFIDKIWEWKAQSG-GTISQQIRRLGNSVDWTRERFTMDDGLSD 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|302386726|ref|YP_003822548.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197354|gb|ADL04925.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 879

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 69/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    +    +            I     N TG +H+GH     + D L 
Sbjct: 7   TYNPAGIEGKLYEKWLDKKYFRAQPNKDKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D          ++ + K
Sbjct: 67  RYKRMQGY---------------------------EALWQPGTDHAAIATEVKVIESLKK 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  DK          + +L    D+  +   +II   L  +    D          G   
Sbjct: 100 QGIDKE-----ELGRDGFLEKCWDWRKEYGGRIINQ-LHKMGSSADWDRERFTMDEGCSE 153

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          Q    D +            +  P+   +G +
Sbjct: 154 AVQEVFIRLYEKGYIYKGSRIVNWCPVCQTSISDAEVEHEDQNGFFWHIKYPIAGEEGRF 213

Query: 332 TYFAA 336
              A 
Sbjct: 214 VEIAT 218


>gi|289578630|ref|YP_003477257.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528343|gb|ADD02695.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 932

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A   K    NVL    V    DG   KMSK  G+ +   
Sbjct: 556 LYLEGSDQHRGWFQSSLLTSVATRGKAPYKNVLTHGFVV---DGEGRKMSKSLGNGVDPA 612

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ E G+D +R   +    +  +      +K+ ++         AY + R+  +     
Sbjct: 613 DVIKEYGADILRLWTVSADFTSDMRISKEILKQMTE---------AYRKIRNTSKFLLSN 663

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             D D D   ++++P E   +  +  L   L      +  A    E
Sbjct: 664 LYDFDPD---KDMLPYEELLEIDKWAL-YRLNRVVEELTEAFDKYE 705


>gi|315303316|ref|ZP_07873947.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628314|gb|EFR96816.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 882

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 57/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 15  PSNVEAGKYKWWLEKAFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L  ++    +             E  
Sbjct: 75  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKEDNISRYDLGR--DNFIKKTWEWK 125

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                          IR+  + L +  D          G    ++
Sbjct: 126 EEYAD------------------------FIREQWEKLGLGLDYSRERFTLDDGLSDAVK 161

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 162 KVFVKLYNKGLIYRGQYIINWDPEAKTALSD 192



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           L RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F F KV+ 
Sbjct: 518 LVRDAEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVES 572


>gi|224499788|ref|ZP_03668137.1| valyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|254831953|ref|ZP_05236608.1| valyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|170718976|ref|YP_001784139.1| valyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083630|sp|B0USP0|SYV_HAES2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|168827105|gb|ACA32476.1| valyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 954

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L     S   +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWESRGYFKPSEDINAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|284801943|ref|YP_003413808.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995085|ref|YP_003416853.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057505|gb|ADB68446.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060552|gb|ADB71491.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|297544853|ref|YP_003677155.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842628|gb|ADH61144.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 932

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A   K    NVL    V    DG   KMSK  G+ +   
Sbjct: 556 LYLEGSDQHRGWFQSSLLTSVATRGKAPYKNVLTHGFVV---DGEGRKMSKSLGNGVDPA 612

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ E G+D +R   +    +  +      +K+ ++         AY + R+  +     
Sbjct: 613 DVIKEYGADILRLWTVSADFTSDMRISKEILKQMTE---------AYRKIRNTSKFLLSN 663

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             D D D   ++++P E   +  +  L   L      +  A    E
Sbjct: 664 LYDFDPD---KDMLPYEELLEIDKWAL-YRLNRVVEELTEAFDKYE 705


>gi|319897045|ref|YP_004135240.1| valyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432549|emb|CBY80909.1| valyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 954

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|322392565|ref|ZP_08066025.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144557|gb|EFX39958.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AESGISRYDLGREKFLEKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDERYKDLI 243



 Score = 37.2 bits (85), Expect = 7.7,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|309799540|ref|ZP_07693769.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116816|gb|EFO54263.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 883

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D    L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSLALEV 216

Query: 327 SDGSYTYFAADLAYFKC----KYERG---------FDNMIYVMGSDHS 361
           +         D+A        +Y+            + +I ++G +H+
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLIGQNVVLPIANKLIPIVGDEHA 264



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKS--DGSYTYFA 335
            +G +Y G   P     TQ  D+        L   STM   DVD    K     S     
Sbjct: 421 AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTG 480

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+ +F          MI+      S               ++   NVL+  L+   RD 
Sbjct: 481 YDIIFFWVS------RMIF-----QSLEFT----------GRQPFQNVLIHGLI---RDE 516

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
              KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 517 QGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 564


>gi|212637931|ref|YP_002314451.1| glutamyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559411|gb|ACJ32466.1| Glutamyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 486

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 103/298 (34%), Gaps = 41/298 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R        +Q+  L     
Sbjct: 10  APSPTGHLHIGGARTALFNYLFARHHHGKFIVRIEDTDIER-NVEGGEQSQLENLKWL-- 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++S   +G Y G Y +     +  +Y++ELL           K +     +
Sbjct: 67  -----GIEYDESVDKDGGY-GPYRQTERLHIYRQYTNELLEKG-----YAYKCFCTPEEL 115

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R+  KA  I    +  +            + +  L  +G  Y   L  P+ K  +  
Sbjct: 116 EQEREAQKAAGIAAPQYSGKC------RHLTPEQVQQLESEGKPYTIRLKVPEGKVYEFE 169

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHS 361
           DM R  + F S  +GD     ++K++G  TY FA  +     K    F       G +H 
Sbjct: 170 DMVRGHVSFESKDIGDW---VIVKANGIPTYNFAVVIDDHLMKITHVFR------GEEHL 220

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +   V      +  +        + L  +    K+SKR    I       E+G 
Sbjct: 221 SNTPKQLMVYEYFGWEPPK-----YAHLTLIVNENRKKLSKRDESIIQFVSQYKELGY 273


>gi|240013385|ref|ZP_04720298.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120456|ref|ZP_04733418.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 929

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 111/367 (30%), Gaps = 56/367 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVI 509
                 +Y R R+            DF+     V   E  E D   L L   L       
Sbjct: 654 ------SYRRIRNTLSFLFANLS--DFNPIEDAVPQAEMVEIDRYALVLARQLQ------ 699

Query: 510 ENATIAQEPYKLAFYLYDLA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           E       P     Y +  A               +    ++ RL   +A++R     + 
Sbjct: 700 ERVAGDFYP----RYAFHFAVKEMVSFCSEDLGAFYLDILKD-RLYTTKADSRARRSAQT 754

Query: 561 QLVHAVA 567
            L H   
Sbjct: 755 ALYHITR 761


>gi|89895934|ref|YP_519421.1| valyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89335382|dbj|BAE84977.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 881

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +             +  ++       +I     N TG +H+GH   + + D L   
Sbjct: 12  DPSQVEGKWYPYWEEKGYFHADVDDAKEPFSIVMPPPNVTGALHLGHAIDSTIQDILTRF 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                                    LP   + G+  +   +E 
Sbjct: 72  KRMQGYNTL--------------------------------WLPGTDHAGIATQAKVEEQ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K  +       EK+L  V D+  +   +I +  L+ L    D          G    +
Sbjct: 100 LAKEGTNRHALGREKFLDRVWDWKKEYGGRITQQ-LRRLGASCDWSRERFTMDEGCSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R++  +L  +G +Y G                 +   +DR+  L+       D D  L+ 
Sbjct: 159 REVFVDLYHKGLIYRGNYIVNWCPHCHTTISDIEVEHVDREGHLWHLRYPVKDSDEVLIV 218

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + +++
Sbjct: 219 ATTRPETMLGDTAVAVHPEDERYRHLL 245


>gi|56418566|ref|YP_145884.1| methionyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|56378408|dbj|BAD74316.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 650

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 106/336 (31%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V            +         +  Q    
Sbjct: 15  PSDRLHIGHAYTTVAGDAMARYKRMRGYDV------------MYLTGTDEHGQKIQRKAE 62

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDD 248
                P+ Y   +        +  D    + +   +E+   +V+     +     I   +
Sbjct: 63  EKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLGE 122

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  + Y +       +     + + D  
Sbjct: 123 YEGWYCTPCESFYTERQLVDGNCPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEENPDFI 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q   R   + ++  +P             DLA  +  ++ G        ++IYV      
Sbjct: 183 QPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALA 232

Query: 357 --------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                   G+D+    ++   A    V ++  + + +   ++ +                
Sbjct: 233 NYITALGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIILMALGLPLPKKVFGHGWL 292

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 293 LMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 328


>gi|15602683|ref|NP_245755.1| valyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|81636973|sp|Q9CMK5|SYV_PASMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12721124|gb|AAK02902.1| ValS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 954

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 62/222 (27%), Gaps = 36/222 (16%)

Query: 90  NL----YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           N       +PS + + L         +  +        +I     N TG +H+GH     
Sbjct: 4   NFEMADRFTPSAVEQALYKHWEESGYFKPSEDTSKPSYSIAIPPPNVTGSLHMGHAFQQT 63

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           + D L       G+    +   + AG     +                            
Sbjct: 64  LMDILIRFNRMEGHNTLWQTGTDHAGIATQMV---------------------------- 95

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +++A +      ++  E ++  + D+   +    I   ++ L    D        
Sbjct: 96  ---VERKIAAEEGKTRHDYGREAFIDKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTM 151

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             G    ++++   L  +G +Y G               D +
Sbjct: 152 DEGLSDAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|325845442|ref|ZP_08168735.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488548|gb|EGC90964.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 655

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 102/336 (30%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  D +A      G++V            ++     +  + Q+A   
Sbjct: 15  PSGKFHIGTAYTTVASDAMARYKRSRGFDVR-------FLTGMDEHGQKIQEKAQEAGKE 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             + + E       L  +     D +        EE    I   +       I +   + 
Sbjct: 68  PQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENG--DIYKGHYEG 125

Query: 252 LNIQ--------------------HDIFISEDDFHRGDPSPIRDIIDN-----------L 280
           L                        D+ + +++ +  +     D +              
Sbjct: 126 LYCTPCESYYTETQLVDGKCPDCGRDVKVVKEESYFFNMKKYADRLMEYYNANPEFILPE 185

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           +R+  +    + P      +   + R    +   + GD      +  D    Y  A L Y
Sbjct: 186 SRKNEMVNNFIKP----GLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITA-LGY 240

Query: 341 FKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
                E  F+      ++V+G D    + R   +      ++        +      + +
Sbjct: 241 GSDNEEL-FNKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMK 295

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    +++  G D+VR+ +L  
Sbjct: 296 DG---KMSKSKGNVVYPEMLIERYGLDAVRYFLLRE 328


>gi|116333862|ref|YP_795389.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099209|gb|ABJ64358.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 888

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 13  DPTAVEAGRYQTWLDEDVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L                        
Sbjct: 73  KRMQGYDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++        I      + +  D          G    +
Sbjct: 102 -REQGISRYDLGREKFVEKVWEWK-DEYADTIHKQWAKMGLSLDYSRERFTLDDGLSDAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L ++G +Y G          +    D
Sbjct: 160 KKVFVTLYKKGLIYRGEYIINWDPQARTALSD 191


>gi|329667571|gb|AEB93519.1| valyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 879

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKLRTQ--------------------- 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 101 ----GKDRHEMGREAFVKQVWDWK-DEYAAIIKSQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RKVFVQLYNEGLIYRGEYIINWDPKLETALSD 187



 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 100/303 (33%), Gaps = 45/303 (14%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + + R   +ND G               +A      DL E  +  + ++ +   +     
Sbjct: 289 HNLERINVMNDNGTMNEEAGKYAGMDRFEAREALVKDLKEEGFL-IKVEPIVHSVGHSER 347

Query: 219 SELLNFPE--EKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           S +   P   ++W   +K            D  V  + +     L+        ++    
Sbjct: 348 SGVQVEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ 407

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRP 323
              G    I    +   + G  Y G L  PK     + D D     F S +     +  P
Sbjct: 408 LWWGH--RIPAWYN--KKTGETYVG-LEAPKDSENWEQDPDVLDTWFSSALWPFSTLGWP 462

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQ 380
              S+    YF             G+D +I+   S     S +             K+  
Sbjct: 463 DENSEDFKRYFPT------NTLVTGYD-IIFFWVSRMIFQSLHFT----------GKRPF 505

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDF 439
            +V+L  L+   RD    KMSK  G+ +    VVDE G+D++R+ +L      +   +D 
Sbjct: 506 DDVVLHGLI---RDPQGRKMSKSLGNGVDPMDVVDEYGADALRWFLLNGTAPGQDTRYDP 562

Query: 440 CKV 442
            K+
Sbjct: 563 KKM 565


>gi|73662410|ref|YP_301191.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|90108439|sp|Q49Y96|SYV_STAS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72494925|dbj|BAE18246.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 876

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 57/202 (28%), Gaps = 34/202 (16%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
             V SG    ++   K T   +     N TG +H+GH     + D L  +    GY+   
Sbjct: 19  QWVNSGYFKAKDDQSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYD--T 75

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
            Y        ++   ++   + +  L  N+  L               +  ++Y+     
Sbjct: 76  LYLPG-----MDHAGIATQAKVEAKL--NEQGLSRHDLGREKFLEQAWDWKEEYA----- 123

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                                IR     L +  D          G    ++ +  ++  +
Sbjct: 124 -------------------NFIRQQWAKLGLGLDYSRERFTLDEGLSKAVKKVFVDMYNK 164

Query: 284 GYVYEGILPPPKSKTTQKCDMD 305
           G +Y G          +    D
Sbjct: 165 GLIYRGEYIINWDPIARTALSD 186



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 95/276 (34%), Gaps = 52/276 (18%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W+  ++D+++   +         +   +     E      +P  I + + +       +
Sbjct: 393 RWMEEIRDWTISRQLWWGHQ----IPAWYHKETGEIFVGEHEPEDIENWVQDEDVLDTWF 448

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L P  +      + D  Q  F +  +                               
Sbjct: 449 SSALWPFSTLGWPDVEADDFQRYFPTNALV-----------------------------T 479

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           G+D +I+         V R+       + K+   +VLL  LVR   DG   KMSK  G+ 
Sbjct: 480 GYD-IIFFW-------VARMIFQGLEFTGKRPFNDVLLHGLVR-AEDGR--KMSKSLGNG 528

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    V+DE G+DS+R+ +    +    D  +   K +S  N  F  +   A   SI   
Sbjct: 529 VDPMDVIDEYGADSLRYFLATGSSPGH-DLRYSTEKVESIWN--FINKIWNAARFSIMNI 585

Query: 468 AKDIFPDL-----DFDLFPRNVIPQESEFDTSELQL 498
            +D   +      D  L  + ++ + +E   +  +L
Sbjct: 586 GEDFTVEQVDLSGDLSLADKWILTRLNETIENVTEL 621


>gi|116511600|ref|YP_808816.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107254|gb|ABJ72394.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 666

 Score = 54.9 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 109/332 (32%), Gaps = 45/332 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++      +++ G +I   A  +    ++ L  
Sbjct: 16  PSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQRKAEELGMTPKEYLDP 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----------DY 236
             +D+ E           +++       +          E+  + + K          ++
Sbjct: 76  MAADVQELWKKLDISYDKFIRTTDTYHEEAVQKIFEKLLEQDDIYLGKYAGWYSVSDEEF 135

Query: 237 SVQAMMKIIRDDLKALNIQ-------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             +  ++ +  D +A N+        H++   E++ +        D + +       +  
Sbjct: 136 FTETQLEEVFKD-EAGNVTGGIAPSGHEVEWVEEESYFFRMGKYADWLLDFYEANPTFIE 194

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTYFAADLAYF- 341
                            + L    T          +      +  D  + Y  A L ++ 
Sbjct: 195 PAIRKNEMINNFIKPGLEDLAVSRTTFTWGIPVKSNPKHVVYVWLDALFNYVTA-LGFYG 253

Query: 342 -KCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                 + F   + ++G +    H+ Y         A+  +  +   +      L +DG 
Sbjct: 254 DDDSLYKKFWPGVNMVGKEIVRFHTIY---WPIFCKALGIEPPK--QVFAHGWLLMKDG- 307

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             KMSK  G+ +    +++  G D+VR+ ++ 
Sbjct: 308 --KMSKSKGNVVYPEMLIERYGLDAVRYYLMR 337


>gi|332311994|gb|EGJ25089.1| Valyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 891

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 58/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 24  PSNVEAGKYKWWLEKEFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 83

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L  ++    +             E  
Sbjct: 84  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKESNVSRYDLGR--ENFVDKTWEWK 134

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 135 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 170

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 171 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 201



 Score = 38.4 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 434 KETGEIYVGESEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENP----DFQHFFPT 489

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 490 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 531

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 532 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 581


>gi|227518203|ref|ZP_03948252.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074359|gb|EEI12322.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 880

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             GV    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGVSRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|123430751|ref|XP_001307941.1| glutamyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121889596|gb|EAX95011.1| glutamyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 491

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 105/291 (36%), Gaps = 45/291 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  R  Y+  A   I  L  
Sbjct: 9   APSPTGYLHIGGLRTALYNYLFAKKNGGKFVLRI-----EDTDRTRYVEGA---IENLIE 60

Query: 180 SVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           S+ W    + + +   D +L E    G Y++    ++  KY  +L+      +       
Sbjct: 61  SLEWAGITHDEGVVVKDGNLTEVGNCGPYIQSQRLDIYKKYVDKLIE-DGHAYYCFCSKD 119

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +  + +  R                D   RG P  + +    +A  G  Y   L  PK+
Sbjct: 120 RLDHLREEQR--------IKGKVPKYDGLCRGIP--LEEAKKRVAA-GEDYVVRLKLPKN 168

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K     D  R ++   +  +    D+ L+KSDG  TY    +A     +  G  ++  V 
Sbjct: 169 KDITFNDAVRGKVTINTDEID---DQVLMKSDGFPTYH---MAVIVDDHLMGITHI--VR 220

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           G +      +   +   +  +  +  V L  ++   R     K+SKR GD 
Sbjct: 221 GEEWLPSTPKHVYLYECLGWQPPEF-VHLPTVLNKDR----KKLSKRQGDV 266


>gi|319399722|gb|EFV87971.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 466

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 137/421 (32%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +     + +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNSRVMHHMGEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EV  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++       +     E      Q+   L ++  V+++         +  + YDLA + + 
Sbjct: 325 IEE---REEIATDLEEQSEYIQQIDKILNQFETVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|153852712|ref|ZP_01994149.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
 gi|149754354|gb|EDM64285.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
          Length = 886

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 50/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYNPKAIEAKLYEKWCDNKYFHAEVDRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E             
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGR--EKFLERTW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  ++Y+                          I   LK L +  D          G   
Sbjct: 119 QWKEEYA------------------------GTIEGQLKKLGVSCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYNEGYIYKG 172


>gi|46907782|ref|YP_014171.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093088|ref|ZP_00230865.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224153|ref|YP_002758260.1| valyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824389|ref|ZP_05229390.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852176|ref|ZP_05241524.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931492|ref|ZP_05264851.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255521286|ref|ZP_05388523.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764782|ref|ZP_07074772.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403272|sp|Q71ZB6|SYV_LISMF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46881051|gb|AAT04348.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018528|gb|EAL09284.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876615|emb|CAS05324.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258605480|gb|EEW18088.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583044|gb|EFF95076.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593624|gb|EFG01385.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514458|gb|EFK41515.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328465587|gb|EGF36816.1| valyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 883

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 58/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L  ++    +             E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKESNVSRYDLGR--ENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGESEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|332982252|ref|YP_004463693.1| valyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699930|gb|AEE96871.1| valyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 877

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 52/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +     +  +    +   +        I     N TG +H+GH     + D L   
Sbjct: 9   DPSKVEDKWYTEWMDKGYFRAEVDKNKQPFCIVMPPPNITGQLHIGHAVNNTLQDILIRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D             + KE 
Sbjct: 69  RRMQGYN---------------------------ALWIPGTDHASIATEAKIKDELAKEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             KY      F E  W         +   + I   LK L +  D          G    +
Sbjct: 102 ITKYDLGREKFLERAWQ------WREKYGRRITAQLKRLGVSCDWSRERFTMDEGCSRAV 155

Query: 274 RDIIDNLARQGYVYEG 289
            ++   L  +G +Y G
Sbjct: 156 IEVFVRLYEKGLIYRG 171



 Score = 38.0 bits (87), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           + RD    KMSK  G+ +    VVD+ G+D++RF ++        + F + KV+      
Sbjct: 516 IVRDDEGRKMSKSLGNGVDPLDVVDKYGADALRFTLVTGNAPGNDMRFYWDKVEASRNF- 574

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                         I+  A+ +  +L+        + + +  D         L  Y +++
Sbjct: 575 -----------ANKIWNAARFVLLNLNEQDIKPTSLDELTLPDRW------ILTRYSQLV 617

Query: 510 ENATIAQE 517
           E  T   E
Sbjct: 618 EEVTSNLE 625


>gi|330838376|ref|YP_004412956.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746140|gb|AEB99496.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 655

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 110/337 (32%), Gaps = 60/337 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  + D +A     + ++V                      +  Q    
Sbjct: 15  PSAKLHIGHAYCTTIADAVARFKRLTDHDV------------FFLTGSDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDD 248
            +   P  Y   +     G  +     + + +   EE+   +V++   +   K  I +  
Sbjct: 63  EEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKGK 122

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            K L     + + +E     G        +  +    Y ++      +     + + D  
Sbjct: 123 YKGLYCTPCESYWTERQLADGKCPDCGREVAEVEEDAYFFKMSHYADRVLAYIEENPDFI 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM-GS-- 358
           Q + R   + + + + L            DL   +  ++ G       D++IYV   +  
Sbjct: 183 QPVSRRNEMINFIKQGL-----------EDLCISRTSFDWGIPVPIAPDHVIYVWFDALT 231

Query: 359 ---------DHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG------------- 395
                    D     ++   A    V ++  + + ++   + +  D              
Sbjct: 232 NYLTPIGFLDDPEKFEKYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLI 291

Query: 396 -MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
               KMSK  G+ +    ++DE G+D++R+ +L   N
Sbjct: 292 VDGDKMSKSKGNVVDPVQLIDEFGADAIRYFLLREIN 328


>gi|325288489|ref|YP_004264670.1| glutamyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963890|gb|ADY54669.1| glutamyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 486

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 101/289 (34%), Gaps = 40/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP+H+G  R A+     +       ++ F   ++ R             +  ++ 
Sbjct: 8   APSPTGPLHIGGARSALFNYLFSCNKKGKFILRFEDTDLERSSR-----ESEKNIIQALR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D    +G   G Y +    E   KY+++LL      +    ++   Q   
Sbjct: 63  WLGIEWNEGMD----KGGENGPYRQTERLETYQKYTNKLLAEGNAYYCYCSEEELDQERQ 118

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +++        +     ++E      +    + ++                P+ +     
Sbjct: 119 ELLMKGETPRYMGKCRSLTEAQKQVFESQGRKPVV------------RFRVPEGQEITIN 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  R ++ F S  +GD +   ++KSDG  TY   + A        G  ++  V G +H  
Sbjct: 167 DSVRGKVTFDSNGIGDYI---IVKSDGIPTY---NFAVVIDDVLMGITHV--VRGEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A++    +        + L  +    KMSKR GD   + 
Sbjct: 219 NTPRQVLIYEALNFDVPEFAH-----ISLILNTEGHKMSKRDGDTAVID 262


>gi|311029025|ref|ZP_07707115.1| glutamyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 483

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 106/294 (36%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A   + +G  + R   I D   + N         +Y +
Sbjct: 8   APSPTGHLHIGNARTALFNYLFAR--SQNGKFIIR---IEDTDKKRNIAGGEESQLKYLK 62

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKII 245
            L  + D  +  G   G Y +    E+  K+ +ELL      K     ++   +   +I 
Sbjct: 63  WLGMDWDESVDVGGEYGPYRQSERNEIYTKFYNELLEKNLAYKCYCTEEELEAEREEQIA 122

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +    + +H     E+                   +G         PK K  +  DM 
Sbjct: 123 RGENPNYSGKHSNLTVEEQ-------------KAFEAEGREPSIRFRVPKGKEIKFNDMV 169

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           +  + F S  +GD     ++K DG+ TY   + A     +     +++   G DH     
Sbjct: 170 KGDVSFESDGIGDF---VIVKKDGTPTY---NFAVAVDDHLMQISHVLR--GDDHISNTP 221

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A+        V +   + L  +    K+SKR    I      +E+G 
Sbjct: 222 KQIMIFEALGWD-----VPVFGHMTLIVNESRKKLSKRDESIIQFIEQYEELGY 270


>gi|254993780|ref|ZP_05275970.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 885

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 58/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L  ++    +             E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLKESNVSRYDLGR--ENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 38.0 bits (87), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 281 ARQGYVYEGILPPPK-SKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P   S+  Q  D+        L   STM   D + P    D  + +  
Sbjct: 426 KETGEIYVGESEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENP----DFQHFFPT 481

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L         G+D +I+   S        +        E+  +  ++      L RD 
Sbjct: 482 NTLVT-------GYD-IIFFWVSR------MIFQSVEFTGERPFKDTLIHG----LVRDS 523

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
              KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 524 EGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|124024602|ref|YP_001018909.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964888|gb|ABM79644.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9303]
          Length = 947

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 43/359 (11%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W  + +D+        I   L     +   +    +           ++     +   +
Sbjct: 423 RWQKVYRDWLTDIRDWCISRQLW-WGHRIPAWFVVSETDDQLTDATPYLVARSEEE--AW 479

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK--CKY 345
           +            + D D     F S +             G     +ADL  +      
Sbjct: 480 QQARDQFGEAVVIQQDEDVLDTWFSSGLWPFSTM-------GWPDQESADLECWYPTSTL 532

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG
Sbjct: 533 VTGFD-IIFFW-------VARMTMMAGAFTGRMPFADVYIHGLV---RDEQNRKMSKSAG 581

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I    +++  G+D++RF ++        D      ++      V   +    +  +  
Sbjct: 582 NGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNAT 641

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKL-- 521
           R A                     E D + LQL     L+   R+  +     + Y+L  
Sbjct: 642 RFALMN--------LGGETPASLGEPDPASLQLADRWILSRLARMTRDVAERYDSYRLGE 693

Query: 522 -AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NII 577
            A  LY+ A +     +    +         ++  L         A   ++   L +++
Sbjct: 694 AAKCLYEFAWNDICDWYLELSKRRLHPGEDPSDEVLADQ----CTA-RQVLAKVLADLL 747



 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 67/242 (27%), Gaps = 49/242 (20%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK----------ILSSIVVSG 109
            P   A ++  R+     V  +  A   F+    +   L K             +   SG
Sbjct: 3   APRPFASMV--RMPSTSIVTELSAADPAFVQ---AADALAKTYDPAGTESRWQCAWEESG 57

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
             +       G   ++     N TG +H+GH     + DT+       G           
Sbjct: 58  AFHPDPQA-AGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQG----------- 105

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
                           +  L    +D        +  K +  E   +Y      F E  W
Sbjct: 106 ----------------KNVLCLPGTDHASIAVQTILEKQLKAEAISRYDLGREAFLERAW 149

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
               K+ S       I D L+ L    D          G  + +R+    L  QG +Y G
Sbjct: 150 --AWKEESG----GRIVDQLRRLGYSVDWQRQRFTLDEGLSAAVREAFVRLHEQGLIYRG 203

Query: 290 IL 291
             
Sbjct: 204 EY 205


>gi|148998241|ref|ZP_01825710.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576529|ref|ZP_02722403.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067188|ref|YP_003876154.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147755884|gb|EDK62928.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577726|gb|EDT98254.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408725|gb|ADM84152.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 883

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|88703591|ref|ZP_01101307.1| valyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88702305|gb|EAQ99408.1| valyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 921

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 67/227 (29%), Gaps = 43/227 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ L +           +      +   V I     N TG +H+GH     + D L 
Sbjct: 4   TFQPAELEQRWYQQWEDAGYFAPQGGDQAFSVMI--PPPNVTGSLHMGHGFQETIIDALV 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GY+   +   + AG     +                               V +
Sbjct: 62  RYHRMAGYDTLWQPGTDHAGIATQMV-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +   +      E ++  + ++   +    I   L+ L    D          G  +
Sbjct: 91  QLAAQ-GKDRHEMGREAFIEKIWEWKASSG-GTITQQLRRLGASPDWSRERFTMDEGLSA 148

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
            ++++   L R+G +Y G         +    S      + ++ +L 
Sbjct: 149 AVQEVFIRLYREGLIYRGQRLVNWDPAIHTAISDLEVISEEEQGKLW 195


>gi|224540962|ref|ZP_03681501.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526113|gb|EEF95218.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
          Length = 874

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 33/181 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             EY +         +I     N TG +H+GH     + D +       GY+        
Sbjct: 24  DKEYFKAGDLTKKPYSIVIPPPNVTGKLHLGHAWDTTMQDMIIRYKRMQGYDAL------ 77

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                ++   L+   + +  L             G+    +G+E   K   ++  + EE 
Sbjct: 78  -WLPGMDHAGLATQAKVEARLRE----------QGISRYDLGRE---KLVDKIWEWKEE- 122

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                          IIR     L +  D       F  G    +R++   L  +G +Y+
Sbjct: 123 ------------YADIIRAQWAKLGLSLDYSKERFTFDEGLSDAVREVFVRLYEKGLIYQ 170

Query: 289 G 289
           G
Sbjct: 171 G 171



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 20/124 (16%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ +    V+DE G+DS+R+ +L   +    D  +   K +S  N 
Sbjct: 513 LIRDEQGRKMSKSLGNGVDPMDVIDEYGADSLRWFLLNNSSPGA-DMRYVPAKLKSTWN- 570

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRV 508
                        I+  A+ +  ++D D        Q  E D + L L     L     V
Sbjct: 571 ---------FINKIWNSARYVLMNIDED-------QQLEELDYATLNLADKWILNRLNEV 614

Query: 509 IENA 512
           I N 
Sbjct: 615 IRNV 618


>gi|170748216|ref|YP_001754476.1| isoleucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654738|gb|ACB23793.1| isoleucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 988

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 93/274 (33%), Gaps = 36/274 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAAD- 337
           V   I     ++       D     F +            DV      S  ++ +   D 
Sbjct: 530 VNARIRDAFAAEGADAWFRDDAAQRFLAPDHDPAAYEKVTDVLDVWFDSGSTHAFVLDDP 589

Query: 338 -----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                LA  K   + G D ++Y+ GSD   G+ +     +A    +     VL    V  
Sbjct: 590 EAFPGLAGVKRVRDGGRDRVMYLEGSDQHRGWFQSSLLESAGTRGRAPYDIVLTHGFV-- 647

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             DG  +KMSK  G+ +  + V+ + G+D +R  +     ++ L      +K  ++    
Sbjct: 648 -LDGKGLKMSKSKGNVVAPQSVIKDSGADILRLWVAASDYTDDLRIGPEIIKTFAE---- 702

Query: 452 FYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 Y + R+  R     +   +  D      +P+       E  ++  LAE    I 
Sbjct: 703 -----TYRKLRNSLRWMLGSLAHRVPGDDVAYADMPEL------ERLILHRLAELDGEIR 751

Query: 511 NATIAQEPYKLAFYLYD--LASVFHGHWSHGREN 542
            A  A +  ++   L +  +       +   R++
Sbjct: 752 EAYAAFDTKRVVA-LLNGFMTGDLSSFYFDVRKD 784


>gi|229826039|ref|ZP_04452108.1| hypothetical protein GCWU000182_01403 [Abiotrophia defectiva ATCC
           49176]
 gi|229789781|gb|EEP25895.1| hypothetical protein GCWU000182_01403 [Abiotrophia defectiva ATCC
           49176]
          Length = 505

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 142/399 (35%), Gaps = 50/399 (12%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIND 169
           K  K      + +PTG MHVG+ R A+          G  L  +      +  RE ++ +
Sbjct: 17  KKMKQVRTRYAPSPTGRMHVGNLRTALYEFLIAKHEGGSFLLRI-----EDTDRERFVPE 71

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           A   I     +   +     ++   D+   Y P V  +     +  KY+ EL+   E  +
Sbjct: 72  ALDIIYNTMKATGLK-----HDEGPDIGGDYGPYVQSERQAAGIYLKYAKELVEKGE-AY 125

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   ++++ + I      +  +H + +             ++ I+    +G  Y  
Sbjct: 126 YCFCDKERLESLKQTIEGKEVMVYDKHCLHLP------------KEEIEKNLAEGKPYVI 173

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
               P+  TT   D    ++   ++ +    D+ L+KSDG  TY   + A     +  G 
Sbjct: 174 RQNIPREGTTTFKDEVYGEITAPNSELD---DQVLIKSDGYPTY---NFANVVDDHLMGI 227

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++  V G+++     +   +  A   +     +       L  +    K+SKR+G   +
Sbjct: 228 THV--VRGNEYLSSTPKYNRLYEAFGWE-----IPTYIHCPLITNEDHQKLSKRSGHS-S 279

Query: 410 LRHVVDE--VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
              ++++  V    V F+ L   ++E     F       + +     +          R 
Sbjct: 280 YEDLIEQGFVPEAVVNFIALLGWSAESGTEIFDLEGLIREFDYTRINKSPAVFDMVKLRW 339

Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              +    +DFD F    +P   E  T +L L   +AE 
Sbjct: 340 MNGEYLKAMDFDRFYEMALPYLKEVITKDLDL-KKIAEL 377


>gi|261417531|ref|YP_003251213.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765188|ref|YP_004130689.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261373988|gb|ACX76731.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110054|gb|ADU92546.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 650

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 106/336 (31%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V            +         +  Q    
Sbjct: 15  PSDRLHIGHAYTTVAGDAMARYKRMRGYDV------------MYLTGTDEHGQKIQRKAE 62

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDD 248
                P+ Y   +        +  D    + +   +E+   +V+     +     I   +
Sbjct: 63  EKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLGE 122

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  + Y +       +     + + D  
Sbjct: 123 YEGWYCTPCESFYTERQLVDGNCPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEENPDFI 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q   R   + ++  +P             DLA  +  ++ G        ++IYV      
Sbjct: 183 QPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALA 232

Query: 357 --------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                   G+D+    ++   A    V ++  + + +   ++ +                
Sbjct: 233 NYITALGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWL 292

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 293 LMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 328


>gi|210617648|ref|ZP_03291679.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
 gi|210149195|gb|EEA80204.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
          Length = 923

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 51/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 49  TYNPKEIETKLYERWCENKYFHAEVDRSKKPFTIVMPPPNITGKLHMGHALDNTLQDILI 108

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G   +    
Sbjct: 109 RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGREGFLKRT--W 159

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y                           I   LK L    D          G   
Sbjct: 160 EWKEEYG------------------------GTITQQLKKLGTSCDWDRERFTMDEGCSK 195

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 196 AVEEVFIKLYEEGYIYKG 213


>gi|308234583|ref|ZP_07665320.1| glutamyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328944372|ref|ZP_08241835.1| glutamate--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491087|gb|EGF22863.1| glutamate--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 531

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 101/290 (34%), Gaps = 40/290 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     + TR    N    QI   A+   
Sbjct: 15  APSPTGKLHVGGARTAIYNWAFARAHKGTFILRIDDTDPTRSTEEN---TQIILRAM--- 68

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R+    ++   D+  G   G Y +    ++  + + +L+   +  +       ++ A  
Sbjct: 69  -RWLGLDWDEGPDV--GGAFGPYKQTERLDMYRQAAQKLVEEGK-AYYCFCSQETLDAAR 124

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  ++                 ++R       D+       G  Y   +  P ++     
Sbjct: 125 KTAQEQHARF----------QGYNRACRGISLDVAKERIAHGEPYTIRVKVPLNRGDVVV 174

Query: 303 -DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+    + F +  + D +   + +SDG+ TY   + A           ++I   G DH 
Sbjct: 175 HDLIHGDVTFNARELDDFI---IFRSDGTPTY---NFATVCDDAAMKITHIIR--GDDHL 226

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   V  A+    AQ+ V     + L  DG   K+SKR G      
Sbjct: 227 SNTPRQVIVYEALG---AQVPVFAHLSMILGVDGK--KLSKRHGATSVEE 271


>gi|147676404|ref|YP_001210619.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146272501|dbj|BAF58250.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 544

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/338 (13%), Positives = 107/338 (31%), Gaps = 65/338 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+       ++ G +I         R  ++   
Sbjct: 45  PSDNLHIGHAYTTVAADAVARFKKMTGYDTRFLTGTDEHGQKIE--------RAARSRGE 96

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
           +  +  +    G+ L     +  +    + +   E +   +V  +   +     I +   
Sbjct: 97  DPQEFVDKIVAGIKLL---WQKLEVDYDDFIRTTEPRHKKVVSAFFQKLYEQGDIYKAGY 153

Query: 250 KALNIQHDIFIS-EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +            E     G+       ++ L  + Y +                    +
Sbjct: 154 EGWYCTPCEAFWAESRLEGGNCPDCGRPVELLREESYFFRM--------------SKYAE 199

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG----FD--NMIYVM-GS 358
            L R      +  +P  + +   ++      DL   +  +  G    FD  ++IYV   +
Sbjct: 200 RLLRHIEEHPEFIQPASRRNEMVSFIKSGLEDLCVSRTTFNWGIPVPFDPGHVIYVWVDA 259

Query: 359 -------------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM--------- 396
                        D S + K   A    + +   + + ++  ++ +              
Sbjct: 260 LTNYISALGYGTEDDSLFKKYWPADVHLMGKDIVRFHSVIWPILLMAAGLELPRQVVGHG 319

Query: 397 -----PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ +    ++D+ G D++R+ +L  
Sbjct: 320 WLLLESGKMSKSKGNVVDPLVLIDKYGVDAIRYYLLRE 357


>gi|323127776|gb|ADX25073.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 882

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/267 (10%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L  V ++        I++    + +  D          G    +
Sbjct: 98  -REQGISRYDLGRDKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +    + +   R L  
Sbjct: 156 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEGGSRALQV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATTRPETMFGDVAVAVNPEDPRYKDLI 242


>gi|313665064|ref|YP_004046935.1| glutamate--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949749|gb|ADR24345.1| glutamate--tRNA ligase [Mycoplasma leachii PG50]
          Length = 483

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 119/349 (34%), Gaps = 67/349 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A++    A    ++G  + R               +Q   L    
Sbjct: 8   APSPTGFLHIGNTRTALMNYLFAK--HYNGSFIVRIEDTDLARNVDGAIESQFENLNWLG 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQA 240
            +  +    +ND         G Y++    +   + + +L++  +        ++     
Sbjct: 66  IFPDESIFNSNDQK------YGKYMQSQKFDRYKQLAEQLVDQNKAYRCFCTSEELEKDY 119

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             +  +  +     Q  +F++++         I+  ++N       Y      PK+KT  
Sbjct: 120 EEQTSKGIIATKYSQKCLFLTQEQ--------IQKNLENKKE----YSIRFKVPKNKTWT 167

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ R  + F S  +GD     +LKS+G  TY   + A     Y+    +++   G +H
Sbjct: 168 INDIVRGDVSFDSKDLGDF---VILKSNGVATY---NFAVVIDDYDMQITHVLR--GEEH 219

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS- 419
                R   +  A +    +        + L  D    K+SKR+G+ +       + G  
Sbjct: 220 ISNTPRQMMIYDAFNWNYPKFGH-----LTLIVDNTGKKLSKRSGNALFFIEQYKKQGYL 274

Query: 420 -------------------------DSVRFMMLWRKNSELLDFDFCKVK 443
                                    + ++     R +     FD  K+K
Sbjct: 275 SQAIFNYIALLGWSPPGEQEILSQNELIKIFDEKRFSKSPSTFDMVKMK 323


>gi|168333858|ref|ZP_02692101.1| valyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 877

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 73/269 (27%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS + + L     +   + + +        I     N TG +H+GH     + D L 
Sbjct: 5   TYDPSLVEERLYKKWENLGYFHQEVDKSKKPFTIMMPPPNITGQLHMGHALDNTLQDILT 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +    L     D  +      +LK    
Sbjct: 65  RYKRMXGYNTL-------WMPGTDHASIATEVKIVNKLKEEGIDKNDLG-RDEFLKR-AW 115

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  D+Y                          +I   L+ L    D          G  +
Sbjct: 116 QWKDEYG------------------------GLITQQLRKLGSSCDWDRERFTMDAGLSA 151

Query: 272 PIRDIIDNLARQGYVYEG-------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +  +   L  +GY+Y+G        +        +    +R+   +         D  +
Sbjct: 152 AVEAVFIKLYEKGYIYKGSRIINWCPVCKTSISDAEVIHEEREGNFYHLNYKIVGSDEVI 211

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +         D A      ++ + +++
Sbjct: 212 RFATTRPETLLGDTAIAVNPNDKRYAHLV 240


>gi|291278922|ref|YP_003495757.1| valyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753624|dbj|BAI80001.1| valyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 872

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 84/270 (31%), Gaps = 40/270 (14%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + + P+   + L +  +    +  N        +I     N TG +H+GH     + D L
Sbjct: 7   IRIDPADFEEKLYNEWLEKKYFHANENSDKPPYSIVIPPPNVTGSLHMGHALNNTLQDIL 66

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G+EV                                  LP   + G+  ++V 
Sbjct: 67  IRYHRMKGFEVL--------------------------------WLPGTDHAGIATQNVV 94

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + +  +      +   EK++  V  +  ++  +II   LK L    D          G  
Sbjct: 95  ERMLAQEGLSRHDLGREKFIERVWQWREESGGQIINQ-LKRLGASCDWNRERFTMDEGLS 153

Query: 271 SPIRDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           + +R +   L ++G +Y                   +    D++  L+      ++ D  
Sbjct: 154 NAVRTVFVTLYKEGLIYRSNYIINWCPRCHTALSDLEVEHEDKEGALYYIYYPIENSDEK 213

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           LL +         D A      +  + ++I
Sbjct: 214 LLIATTRPETMLGDTAVAVNPNDERYKHLI 243


>gi|217967477|ref|YP_002352983.1| valyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336576|gb|ACK42369.1| valyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 881

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 63/231 (27%), Gaps = 33/231 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      +    +   +       +I     N TG +H+GH   A + D L       G
Sbjct: 15  EEKWYKYWLEKDYFHAEVDRSKKNYSIVLPPPNITGSLHMGHALNATIQDILIRWRRMQG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +        + AG     +                               V +EL  K  
Sbjct: 75  FNALWIPGTDHAGIATQMV-------------------------------VERELL-KEG 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L  V  +  +     I + LK L +  D               +     
Sbjct: 103 KTRWDLGREKFLERVWQWK-ENYGNTIVEQLKKLGVSCDWKRFRFTMDEVYSRAVIKAFV 161

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            L ++GY+Y+G          +    D +            +  PL + DG
Sbjct: 162 ELYKKGYIYKGERIINWCPRCKTALSDLEVRYVEENSFLWYIKYPLYQEDG 212



 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 60/433 (13%), Positives = 139/433 (32%), Gaps = 81/433 (18%)

Query: 154 MAFSGYEVTREYYIND------AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           +   GY + +E Y++D       G  I  L    ++   + L     ++ E       +K
Sbjct: 327 LEKEGYLLKKEPYLHDLATCDRCGTPIEPLISEQWFMRMENLAKPAIEVVEKG----EVK 382

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +       Y           W+  +KD+ +   +            +   +  E+  H 
Sbjct: 383 FIPDRWKKVYFD---------WMYNIKDWCLSRQLWW--------GHRIPAWYCENCGH- 424

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                    ++   ++    E        +     D      L+    +G   D      
Sbjct: 425 ---------VNVEEQKPEKCERCGSENLRQDEDVLDTWFSSALWPLGTLGWPED----TE 471

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           D +Y Y  + L+  +         +I +  +           +      K+     +   
Sbjct: 472 DLNYFYPTSVLSTARD--------IINLWVAR--------MIMMGLEFRKEVPFYYVYVH 515

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
              L R+G   +MSK  G  +    ++++ G+D  RF  L  + +E+ D  F +   ++ 
Sbjct: 516 PTVLTREGK--RMSKSKGTGVDPLELINKYGADVTRFG-LAIQCTEMQDLRFHEENFENT 572

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +N              I+  A+ +  +LDF++    V   +     S+  ++  L +   
Sbjct: 573 KN----------FTNKIWNAARFVISNLDFNIDYNEVDLTKHSLSLSDKWILSRLQK--- 619

Query: 508 VIENATIAQEPYKLAFYLYDLASVF-HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            +   T   E ++ + Y+  + + F         E  + R     + +       L+  V
Sbjct: 620 TVYEVTDHLENFRFSEYVKTIYTFFWSEFCDWYIELSKPRLSNTEDPESR-----LIAQV 674

Query: 567 --ASIINSGLNII 577
               ++   + ++
Sbjct: 675 ILWKVLKESMQLL 687


>gi|260584693|ref|ZP_05852439.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157716|gb|EEW92786.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 881

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 63/217 (29%), Gaps = 37/217 (17%)

Query: 93  LSPSYLRKIL----SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +SP +  + +        V    +  N        +I     N TG +H+GH     + D
Sbjct: 5   MSPKFQPQEVEAGKYQWWVESGVFHPNEDPNAEPYSIVIPPPNVTGKLHLGHAWDVTLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +       GY+             ++   ++   + ++ L             G+    
Sbjct: 65  MIIRQKRMQGYDTL-------WLPGMDHAGIATQAKVEEKLRGE----------GLSRYD 107

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +G+E           F E+ W         +     IR+    + I  D         +G
Sbjct: 108 LGRE----------KFLEQTW------EWKEEYASHIREQWAKMGISVDYRRERFTLDQG 151

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               ++ +   L  +G +Y G          +    D
Sbjct: 152 LSDAVKKVFVTLYEKGLIYRGEYIINWDPKAKTSLSD 188


>gi|194468301|ref|ZP_03074287.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453154|gb|EDX42052.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 884

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 102/358 (28%), Gaps = 66/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DPAAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+  
Sbjct: 71  KRMQGYDVL-------WVPGMDHAGIATQAKVEARLRK----------QGISRYDLGR-- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  ++ ++ +E                II      + I  D          G    +
Sbjct: 112 -DKFVQQVWDWKDE-------------YADIIHQQWAKMGISVDYDRERFTLDEGLNKAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +  +L  +G +Y G          +    D +  +      G         +DG+ T+
Sbjct: 158 RKVFVDLYNKGLIYRGTYIINWDPQARTALSDIE--VIHKDDKGAFYHVKYPFTDGT-TF 214

Query: 334 FAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D +     + E  F                          ++   +N        L 
Sbjct: 215 NGKDYIEIATTRPETMF-------------------------GDEAVAVNPNDERYKDLV 249

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              + + +  R  + I   +V  E G+  V+         +  DF   K     + N 
Sbjct: 250 GKKVMVPLVNREIEIIADDYVTPEFGTGMVKI----TPAHDPNDFKVGKRHNLPELNT 303


>gi|153816358|ref|ZP_01969026.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756]
 gi|317501006|ref|ZP_07959214.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145846319|gb|EDK23237.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756]
 gi|316897584|gb|EFV19647.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 633

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 129/409 (31%), Gaps = 66/409 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   A
Sbjct: 3   EKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 62

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  ++ +    +++         +  +     DK+        E++   I K    
Sbjct: 63  EEAGVTPKEFVDGVSAEIK-------KIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYD 115

Query: 239 QAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           Q    I +   + +     + F +E     G        +     + Y ++      +  
Sbjct: 116 QG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRLI 173

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--N 351
                  +  Q + R   + ++   P             DL   +  ++ G    FD  +
Sbjct: 174 EHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDDKH 223

Query: 352 MIYVM-------------GSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           ++YV               +D      Y K   A    + +   + + +   +  L   G
Sbjct: 224 VVYVWLDALTNYITGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIF-LMALG 282

Query: 396 MPI---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
           +P+               KMSK  G+ +    +VD  G D+VR+ +L            +
Sbjct: 283 LPLPKQVFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITW 342

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
             + E+   +    +     R  S+  +        K    D+D DL  
Sbjct: 343 ELMVERLNSDLANTLGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKA 391


>gi|55738435|gb|AAV62076.1| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 901

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 28  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 87

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 88  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 117 -AESGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 174

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 175 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 234

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 235 ATTRPETMFGDTAVAVNPNDDRYKDLI 261


>gi|297528406|ref|YP_003669681.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251658|gb|ADI25104.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 650

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 106/336 (31%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V            +         +  Q    
Sbjct: 15  PSDRLHIGHAYTTVAGDAMARYKRMRGYDV------------MYLTGTDEHGQKIQRKAE 62

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDD 248
                P+ Y   +        +  D    + +   +E+   +V+     +     I   +
Sbjct: 63  EKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLGE 122

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       + F +E     G+       ++ +  + Y +       +     + + D  
Sbjct: 123 YEGWYCTPCESFYTERQLVDGNCPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEENPDFI 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q   R   + ++  +P             DLA  +  ++ G        ++IYV      
Sbjct: 183 QPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALA 232

Query: 357 --------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                   G+D+    ++   A    V ++  + + +   ++ +                
Sbjct: 233 NYITALGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWL 292

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 293 LMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 328


>gi|167759909|ref|ZP_02432036.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
 gi|167662528|gb|EDS06658.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 50/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIESKLYEKWCENKYFHAEVDRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E             
Sbjct: 68  RYKRMQGYNAL-------WVPGTDHAAISTEVKVTNQLKEEGIDKKELGR--EKFLERTW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  ++Y+                          I D LK L +  D          G   
Sbjct: 119 QWKEEYA------------------------GTIEDQLKKLGVSCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y G
Sbjct: 155 AVEEVFIKLYEEGYIYRG 172


>gi|116513817|ref|YP_812723.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093132|gb|ABJ58285.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 879

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPQEVEAGRYQEWLDEDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++       II+   + L +  D         +G    +
Sbjct: 98  -REQGVSRYDLGREKFVEKVWEWK-DEYANIIKRQWQKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RRVFVQLYNEGLIYRGEYIINWDPKLRTALSD 187



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +            E+     VL      L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFT---------GERPFDNVVLHG----LIRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ I    V+ + G+D++R+ +L      +   F + K+
Sbjct: 526 LGNGIDPMDVIAKYGADALRWFLLNGTAPGQDTRFSYTKM 565


>gi|269122997|ref|YP_003305574.1| glutamyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314323|gb|ACZ00697.1| glutamyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 492

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 103/286 (36%), Gaps = 46/286 (16%)

Query: 128 VSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           ++ +PTG  HVG     +          GD +  +      +  R  + +D+  QI    
Sbjct: 9   IAPSPTGDPHVGTAYIGLFNYAFAHHNGGDFILRI-----EDTDRTRFSSDSEQQIFD-- 61

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            ++ W         D   P     G Y +    E+  +Y+  L+   E  +      +  
Sbjct: 62  -AMKWLGLNYTEGPDLGGP----FGPYRQSERFEIYKEYAVSLVEKGEAYY-----SFET 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              ++I+R+  KA+ +          + R   +  ++ ++    +G  Y   L  P    
Sbjct: 112 PEELEIMRERQKAMGLPPM-------YDRRSRNLTKEQVEENLAKGLPYVIRLKMPLDGQ 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  R ++ F +  +    D+ LLKSDG  TY    LA     +  G  ++I     
Sbjct: 165 TIVEDGLRGKIFFDNDKID---DQILLKSDGFPTYH---LANIVDDHLMGVTHVIR--AE 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +      +   +  A   ++ +        + L R+    K+SKR 
Sbjct: 217 EWIASTPKHIQLYKAFGWEEPK-----WFHMPLLRNADKTKISKRK 257


>gi|12834003|dbj|BAB22747.1| unnamed protein product [Mus musculus]
          Length = 167

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 30/149 (20%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI-- 509
           +V Y  AR  ++F   K       +  FP  + +      D  E  L+     +  V+  
Sbjct: 27  FVMYNCARLATLFEGYKHGTEQGLYPTFPLVSSLDFSLLHDEGEWLLL-----FNSVLPF 81

Query: 510 -----ENATIAQEP--YK------LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL- 555
                +  ++A  P  +       +  +L  L+  F  +++      R+  +      L 
Sbjct: 82  LDLLSQTVSLAGTPGLHIPVRTEMVCKFLVQLSMDFSSYYN------RVHILGEPRPHLF 135

Query: 556 --TMMRLQLVHAVASIINSGLNIIGVESP 582
                RLQL+ AV  + ++GL ++G+   
Sbjct: 136 GQMFARLQLLRAVREVFHTGLAMLGLPPL 164


>gi|219670367|ref|YP_002460802.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219540627|gb|ACL22366.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 881

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +             +  ++       +I     N TG +H+GH   + + D L   
Sbjct: 12  DPSQVEGKWYPYWEEKGYFHADVDDAKEPFSIVMPPPNVTGALHLGHAIDSTIQDILTRF 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                                    LP   + G+  +   +E 
Sbjct: 72  KRMQGYNTL--------------------------------WLPGTDHAGIATQAKVEEQ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K  +       EK+L  V D+  +   +I +  L+ L    D          G    +
Sbjct: 100 LAKEGTNRQALGREKFLDRVWDWKKEYGGRITQQ-LRRLGASCDWSRERFTMDEGCSEAV 158

Query: 274 RDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R++  +L  +G +Y G                 +   +DR+  L+       D D  L+ 
Sbjct: 159 REVFVDLYHKGLIYRGNYIVNWCPHCHTTISDIEVEHVDREGHLWHLRYPVKDSDEVLVV 218

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + +++
Sbjct: 219 ATTRPETMLGDTAVAVHPEDERYRHLL 245


>gi|148543739|ref|YP_001271109.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153145|ref|YP_001841486.1| valyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363281|ref|ZP_03847413.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682111|ref|ZP_08161629.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530773|gb|ABQ82772.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224489|dbj|BAG25006.1| valyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071737|gb|EEI10028.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978755|gb|EGC15704.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 884

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 102/358 (28%), Gaps = 66/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DPAAVEEGRYQWWIDQGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+  
Sbjct: 71  KRMQGYDVL-------WVPGMDHAGIATQAKVEARLRK----------QGISRYDLGR-- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  ++ ++ +E                II      + I  D          G    +
Sbjct: 112 -DKFVQQVWDWKDE-------------YADIIHQQWAKMGISVDYDRERFTLDEGLNKAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +  +L  +G +Y G          +    D +  +      G         +DG+ T+
Sbjct: 158 RKVFVDLYNKGLIYRGTYIINWDPQARTALSDIE--VIHKDDKGAFYHVKYPFTDGT-TF 214

Query: 334 FAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D +     + E  F                          ++   +N        L 
Sbjct: 215 NGKDYIEIATTRPETMF-------------------------GDEAVAVNPNDERYKDLV 249

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              + + +  R  + I   +V  E G+  V+         +  DF   K     + N 
Sbjct: 250 GKKVMVPLVNREIEIIADDYVTPEFGTGMVKI----TPAHDPNDFKVGKRHNLPELNT 303


>gi|116627368|ref|YP_819987.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100645|gb|ABJ65791.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -AESGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|315634643|ref|ZP_07889927.1| valine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476591|gb|EFU67339.1| valine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 975

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|312277882|gb|ADQ62539.1| Valyl-tRNA synthetase, putative [Streptococcus thermophilus ND03]
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -AESGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|284044106|ref|YP_003394446.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948327|gb|ADB51071.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 854

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 66/239 (27%), Gaps = 33/239 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +IL   + SG+ +           +I     N TG +H+GH     + D L   
Sbjct: 12  AAEAEPRILRRWLESGLFHPEPEGTADENYSIAVPPPNVTGALHMGHALNGSIQDALIRF 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G    R  +I                            L   +      K V K+L
Sbjct: 72  NRARG---KRAKWI----------------------------LGTDHAGIATQKQVEKQL 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +  S       E +   V  +  Q     I    + L    D               +
Sbjct: 101 AGE-GSGREQIGREAFTERVWQWREQYG-DTIVGQFQRLGASLDYDDERFTLDERYVEAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + +  +L  +G +Y           ++    D +            VD PL   +GS T
Sbjct: 159 QKVFVDLYEKGLIYRDNYMVNWDPGSRSAISDLEVEEREEVDTLYYVDYPLASGNGSIT 217


>gi|197303308|ref|ZP_03168348.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
 gi|197297592|gb|EDY32152.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
          Length = 882

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 52/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + +         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYDPKQIEEKMYEKWCENKYFHAEVDRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G        
Sbjct: 68  RYKRMEGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGREG-------- 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                       F E  W         +     I + LK L I  D          G   
Sbjct: 113 ------------FLERTWQ------WKEEYAGTIENQLKKLGISCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++  +L  +GY+Y+G
Sbjct: 155 AVEEVFISLYEKGYIYKG 172


>gi|161936377|ref|YP_140891.2| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|90108442|sp|Q5M111|SYV_STRT1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -AESGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|55736545|gb|AAV60187.1| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 901

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 28  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 87

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 88  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 117 -AESGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 174

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 175 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 234

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 235 ATTRPETMFGDTAVAVNPNDDRYKDLI 261


>gi|312867069|ref|ZP_07727279.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097198|gb|EFQ55432.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|161611294|ref|YP_139002.2| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|90108443|sp|Q5M5J8|SYV_STRT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 99  -AESGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|313888188|ref|ZP_07821862.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845878|gb|EFR33265.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 883

 Score = 54.5 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 58/238 (24%), Gaps = 41/238 (17%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N    P    + +    +    +   +       +I     N TG +H+GH     + D
Sbjct: 4   LNKTYDPKDFEEKIYDYWMENNYFRAEVDENKKPYSIVMPPPNVTGNLHMGHALNNTIQD 63

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       GY               +  ++S   +  + L N      +          
Sbjct: 64  VLIRTKRMQGYSAL-------WLPGTDHASISTEAKVVEKLRNEG--FNKEDIGREKFLE 114

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              E   +Y   ++N                         LK L I  D           
Sbjct: 115 HAWEWTHEYGGNIVNQ------------------------LKKLGISCDWSRQSFTLDDN 150

Query: 269 DPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
               + ++   L  +G +Y G              S    + +     + +      D
Sbjct: 151 LSHAVEEVFIELYEKGLIYRGNRIINWCPSCETSISDAEVEHEESDGNIWYFKYPFAD 208


>gi|315221983|ref|ZP_07863894.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188949|gb|EFU22653.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 890

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 9   NPAKVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 69  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + +  D          G    +
Sbjct: 98  -AEDGISRYDLGREKFLDKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 155

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 156 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 216 ATTRPETMFGDTAVAVNPEDPRYKDLI 242


>gi|222151545|ref|YP_002560701.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120670|dbj|BAH18005.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 875

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 53/203 (26%), Gaps = 33/203 (16%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               V    +            I     N TG +H+GH     + D +  +    GY   
Sbjct: 15  YKEWVEKELFKAESNSDKKPYTIVIPPPNVTGKLHIGHAWDTTLQDIITRMKRMQGYN-- 72

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
             Y        ++   ++   + +  L             GV    +G+    +++ E  
Sbjct: 73  TLYLPG-----MDHAGIATQAKVEAKLREE----------GVSRHDIGRTKFLEHTMEWK 117

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                           +     IR     L +  D          G    ++++   +  
Sbjct: 118 ----------------EEYAGFIRQQWAKLGLGLDYSRERFTLDEGLSEAVKEVFVKMYE 161

Query: 283 QGYVYEGILPPPKSKTTQKCDMD 305
           +G +Y G          +    D
Sbjct: 162 KGLIYRGERIINWDPVARTALSD 184



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 23/160 (14%)

Query: 363 YVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
           +      +   +    K   + +L   +    DG   KMSK  G+ +    V+D+ G+DS
Sbjct: 483 FFWVARMIFQGLEFTGKRPFDDVLIHGLVRAEDGR--KMSKSLGNGVDPMDVIDQYGADS 540

Query: 422 VRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           +R+ +    +  + L +   KV+             A+     I+  ++    ++  D  
Sbjct: 541 LRYFLATGSSPGQDLRYSTEKVEA------------AWNFINKIWNASRFSLMNIGEDFK 588

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQE 517
             ++     +    E      L      I +        E
Sbjct: 589 AEHIDLSGKKSLADEW----ILTRLNETIADVTRLAEKYE 624


>gi|306820842|ref|ZP_07454465.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551114|gb|EFM39082.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 655

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 107/334 (32%), Gaps = 56/334 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D ++    F+GY+V      ++ G +I   A  +  + ++ L  
Sbjct: 27  PSGKLHIGHTYTTVAVDAISRYKRFTGYDVRFLTGTDEHGEKIQKKAEELGKKPKEYLDG 86

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              D+   +        +  +   + + +      +K    + D     + +        
Sbjct: 87  MIDDIKALWAK----MEISYDDFIRTTDKRHTEAVQKIFKTLYDKGDIYLDEYE----GK 138

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMDR 306
             +  + F +E     G        +       Y      Y+  L          C  + 
Sbjct: 139 YCVPCESFWTESQLVDGKCPDCHREVQTRKESSYFFRLSKYQDRLKKYYEDNPDFCFPES 198

Query: 307 KQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM------- 356
           ++    +  +   + D  + +S             F    +  FD  ++IYV        
Sbjct: 199 RKKEMLTNFINAGLEDLSVSRS------------TFDWGIKVPFDEKHVIYVWIDALSNY 246

Query: 357 -------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-------------- 395
                    D S + K   A    V ++  + + ++   + +  D               
Sbjct: 247 ITALGYDSDDDSLFKKYWPADFHIVGKEIMRFHTIIWPALLMALDLPLPKKVYGHGWILF 306

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ +    +++  G D++++ +L  
Sbjct: 307 GEDKMSKSKGNIVYPEPIIERYGIDALKYFLLRE 340


>gi|126667528|ref|ZP_01738498.1| valyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627954|gb|EAZ98581.1| valyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 956

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 71/242 (29%), Gaps = 37/242 (15%)

Query: 99  RKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           R+   +    G     +      +G   +I     N TG +H+GH     + DTL     
Sbjct: 12  RQWYDNWESKGYFRPHSETLEGSEGESYSIAIPPPNVTGSLHMGHAFQHTIMDTLTRYKR 71

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                               V ++LA 
Sbjct: 72  MQGHNTLWQVGSDHAGIATQMV-------------------------------VERKLAA 100

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +      +   E+++  + ++  ++    I D ++ L    D          G    +++
Sbjct: 101 EEGKTRHDLGREEFIKRIWEWKEESG-GTITDQMRRLGNSVDWDTERFTMDDGFYKAVQE 159

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           +   L   G VY G               D +            +  PL  +DG+ T   
Sbjct: 160 VFVRLYEDGLVYRGKRLVNWDTKLHTAISDLEVENKEEKGFFWHLRYPL--ADGATTLDG 217

Query: 336 AD 337
            D
Sbjct: 218 KD 219


>gi|42518883|ref|NP_964813.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81667980|sp|Q74JZ8|SYV_LACJO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41583169|gb|AAS08779.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 879

 Score = 54.2 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKLRTQ--------------------- 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 101 ----GKDRHEMGREAFVKQVWDWK-DEYASIIKSQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RKVFVQLYNEGLIYRGEYIINWDPKLETALSD 187



 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 100/303 (33%), Gaps = 45/303 (14%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + + R   +ND G               +A      DL E  +  + ++ +   +     
Sbjct: 289 HNLERINVMNDNGTMNEEAGKYAGMDRFEAREALVKDLKEEGFL-IKVEPIVHSVGHSER 347

Query: 219 SELLNFPE--EKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           S +   P   ++W   +K            D  V  + +     L+        ++    
Sbjct: 348 SGVQVEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ 407

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRP 323
              G    I    +   + G  Y G L  PK     + D D     F S +     +  P
Sbjct: 408 LWWGH--RIPAWYN--KKTGETYVG-LEAPKDSENWEQDPDVLDTWFSSALWPFSTLGWP 462

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQ 380
              S+    YF             G+D +I+   S     S +             K+  
Sbjct: 463 DENSEDFKRYFPT------NTLVTGYD-IIFFWVSRMIFQSLHFT----------GKRPF 505

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDF 439
            +V+L  L+   RD    KMSK  G+ +    VVDE G+D++R+ +L      +   +D 
Sbjct: 506 DDVVLHGLI---RDPQGRKMSKSLGNGVDPMDVVDEYGADALRWFLLNGTAPGQDTRYDP 562

Query: 440 CKV 442
            K+
Sbjct: 563 KKM 565


>gi|167037288|ref|YP_001664866.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040517|ref|YP_001663502.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914564|ref|ZP_07131880.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724200|ref|YP_003903951.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115704|ref|YP_004185863.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|254782449|sp|B0K8R7|SYI_THEP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782450|sp|B0K2W1|SYI_THEPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166854757|gb|ABY93166.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856122|gb|ABY94530.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889499|gb|EFK84645.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581261|gb|ADN54660.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928795|gb|ADV79480.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 932

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A   K    NVL    V    DG   KMSK  G+ I   
Sbjct: 556 LYLEGSDQHRGWFQSSLLTSVATRGKAPYRNVLTHGFVV---DGEGRKMSKSLGNGIDPA 612

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ E G+D +R   +    +  +      +K+ ++         AY + R+  +     
Sbjct: 613 DVIKEYGADILRLWTVSADFTSDMRISQEILKQMTE---------AYRKIRNTSKFLLSN 663

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             D D D   ++++P E   +  +  L   L      +  A    E
Sbjct: 664 LYDFDPD---KDMLPYEELLEIDKWAL-FRLNRVVEELTEAFDKYE 705


>gi|294784265|ref|ZP_06749560.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294488131|gb|EFG35482.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 887

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 85/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEEGKKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L R G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 RKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      ++  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTVLEQGLRLL 691


>gi|160915954|ref|ZP_02078162.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
 gi|158432430|gb|EDP10719.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
          Length = 874

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 34/201 (16%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N     + + K      +    +      K     +     N TG +H+GH     + D
Sbjct: 5   LNQKYDHALVEKEHYQTWLEKGYFTAGDKSKDPFCVV-IPPPNVTGKLHLGHAWDTTLQD 63

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +A      G+++            ++   ++   +  + L N           G+    
Sbjct: 64  IVARYKRMRGFDML-------WLPGMDHAGIATQAKVDERLKNE----------GISRYD 106

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +G+E          NF +  W         +     IR     + +  D          G
Sbjct: 107 IGRE----------NFLKRAW------EWKEEYASTIRKQWAKMGLSLDYSRERFTLDEG 150

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               +R +  +L  +G +Y+G
Sbjct: 151 LSQAVRKVFVDLYNEGLIYQG 171



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 27/171 (15%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   +  +    +      +   K    +VL+  LV   RD    KMSK  G+
Sbjct: 480 TGYD-IIFFWVARMA---FQTRYCMKSRPFK----DVLIHGLV---RDSQGRKMSKSLGN 528

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    V+ + G DS+RF +         D  + + K ++  N +  +  A    R +  
Sbjct: 529 GVDPMDVIAKSGVDSLRFFLTTNSTPGQ-DLRYSEEKVEASANFINKIWNA---ARFVLM 584

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             K+     D DL   ++I +              L  +  V+EN T   E
Sbjct: 585 HTKEDMCMSDVDLTHASMIDKWI------------LRRFNEVLENVTANME 623


>gi|257417812|ref|ZP_05594806.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257159640|gb|EEU89600.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190



 Score = 36.8 bits (84), Expect = 9.3,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G+  P  S+     D D     F S +             G     + D   
Sbjct: 423 KETGEMYVGMEEPADSEN-WVQDSDVLDTWFSSALWPFSTM-------GWPNEASED--- 471

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPI 398
               Y+R F     V G D   +      +  ++    ++   NVL+  L+   RD    
Sbjct: 472 ----YQRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTGERPFQNVLIHGLI---RDEQGR 523

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 524 KMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 568


>gi|257077439|ref|ZP_05571800.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779640|ref|ZP_06745031.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307269913|ref|ZP_07551239.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256985469|gb|EEU72771.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453297|gb|EFG21708.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306513703|gb|EFM82309.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|229844147|ref|ZP_04464288.1| valyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229813141|gb|EEP48829.1| valyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|145636107|ref|ZP_01791777.1| bifunctional indole-3-glycerol phosphate
           synthase/phosphoribosylanthranilate isomerase
           [Haemophilus influenzae PittHH]
 gi|145270629|gb|EDK10562.1| bifunctional indole-3-glycerol phosphate
           synthase/phosphoribosylanthranilate isomerase
           [Haemophilus influenzae PittHH]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|29377395|ref|NP_816549.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554378|ref|ZP_03984425.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|75541540|sp|Q82ZW6|SYV_ENTFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29344862|gb|AAO82619.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176497|gb|EEI57469.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315576283|gb|EFU88474.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582775|gb|EFU94966.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190



 Score = 36.8 bits (84), Expect = 9.5,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G+  P  S+     D D     F S +             G     + D   
Sbjct: 423 KETGEMYVGMEEPADSEN-WVQDSDVLDTWFSSALWPFSTM-------GWPNEASED--- 471

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPI 398
               Y+R F     V G D   +      +  ++    ++   NVL+  L+   RD    
Sbjct: 472 ----YQRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTGERPFQNVLIHGLI---RDEQGR 523

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 524 KMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKM 568


>gi|260583019|ref|ZP_05850801.1| valyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260093870|gb|EEW77776.1| valyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|145641417|ref|ZP_01796996.1| valyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273960|gb|EDK13827.1| valyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|323478896|gb|ADX78335.1| valyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|302384601|ref|YP_003820423.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195229|gb|ADL02800.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 659

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 59/387 (15%), Positives = 120/387 (31%), Gaps = 61/387 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+   AV+ D +A      GY+V  +   ++ G +I   A + 
Sbjct: 13  TTAIAYASGKP----HIGNTYEAVLADAIARYKRAEGYDVFFQTGTDEHGQKIEEKAEAA 68

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+        EE+   I K   +   
Sbjct: 69  GITPKEFVDRAAGEI-------RKIWDLMNTSYDKFIRTTDKDHEEQVQKIFKK--LYEQ 119

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I +   + L     + F +E     G        +     + Y +       +     
Sbjct: 120 DDIYKGYYEGLYCTPCESFFTESQLVDGKCPDCGREVKPAKEEAYFFRMSKYADRLIKHI 179

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
             + D  Q + R   + ++   P             DL   +  ++ G    FD  ++ Y
Sbjct: 180 NENPDFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTTFQWGIPVSFDPRHVTY 229

Query: 355 VM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---- 394
           V                 G     + K   A    + +   + + +   +  +  D    
Sbjct: 230 VWLDALTNYITGIGYDCDGQSREQFSKLWPADLHLIGKDIIRFHTIYWPIFLMALDIPLP 289

Query: 395 ----GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
               G P       KMSK  G+ +    +VD  G D+VR+ +L            +  + 
Sbjct: 290 KQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGIISWELMV 349

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKD 470
           E+   +    +     R  S+  +  +
Sbjct: 350 ERMNSDLANILGNLVNRTISMSNKYFE 376


>gi|301156601|emb|CBW16072.1| valyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 472

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 67/420 (15%), Positives = 119/420 (28%), Gaps = 112/420 (26%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R  +V DT+       GYEV    Y+        
Sbjct: 16  KPIEPHKVRMYVCGPTVYNLIHIGNARPYIVFDTVRRYFESVGYEV---NYV-------- 64

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                                            V  ++  K + E  +  E         
Sbjct: 65  ----------------------------QNFTDVDDKIIKKANEEGRSTNE--------- 87

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE------- 288
                + + I + LK +N  +    +       +   I ++I  L  +GY YE       
Sbjct: 88  ----VVTQYIEETLKDVNNLNVTPATHHPRVTEEMDRIIEMIKELIEKGYAYEINGTVYF 143

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-------------SDGS 330
                        K  ++ +  R + +  +    + +D  L K             S+G 
Sbjct: 144 DTAAFEQYGKLSKKVLEELEAGRSERVALTEEKKNHMDFVLWKPKKEGEPYWESPWSNGR 203

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLL 385
             +     A  K       D  I+  G D     H   + + E                 
Sbjct: 204 PGWHIECSAMAKRYLGDTID--IHAGGEDLVFPHHENEIAQSECANGK--------EFAH 253

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
             +   + +    KMSK  G+F TLR V +  G D VRF ML       L+F    ++  
Sbjct: 254 YWMHNAFLNIDNKKMSKSLGNFKTLRDVGEMYGYDVVRFFMLNAHYRSPLNFSAELIESA 313

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
                               + + +   +    L       Q ++    E  L+  L ++
Sbjct: 314 --------------------KNSLERIKNAKATLSFALEHSQIADLTEEEKALLKELDDF 353


>gi|289550579|ref|YP_003471483.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180111|gb|ADC87356.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 876

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 55/202 (27%), Gaps = 34/202 (16%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
             V SG         K     +     N TG +H+GH     + D +  +    GY+   
Sbjct: 19  EWVNSGYFNTSTDKSKKPYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYD--T 75

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
            Y        ++   ++   + +  L  N+  +               E  ++Y+S    
Sbjct: 76  LYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDIGREKFLEQAWEWKEEYAS---- 124

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                                IR     L +  D          G    ++ +  +L  +
Sbjct: 125 --------------------FIRQQWAKLGLGLDYSRERFTLDEGLSQAVKKVFVDLYNK 164

Query: 284 GYVYEGILPPPKSKTTQKCDMD 305
           G +Y G          +    D
Sbjct: 165 GIIYRGERIINWDPKARTALSD 186



 Score = 38.4 bits (88), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 23/171 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       +E++   +VLL  LVR   DG   KMSK  G+
Sbjct: 479 TGYD-IIFFW-------VARMIFQGLEFTERRPFQDVLLHGLVR-AEDGR--KMSKSLGN 527

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    V++E G+DS+R+ +    +    D  +   K +S  N              I+ 
Sbjct: 528 GVDPMDVIEEYGADSLRYFLATGSSPGH-DLRYSTEKVESVWN----------FINKIWN 576

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            A+    ++  D F    I        ++  ++  L E    + + +   E
Sbjct: 577 GARFSLMNIGED-FAVEDIDLSGNLSLADKWILTRLNETIETVTDLSDKYE 626


>gi|164686599|ref|ZP_02210627.1| hypothetical protein CLOBAR_00191 [Clostridium bartlettii DSM
           16795]
 gi|164604328|gb|EDQ97793.1| hypothetical protein CLOBAR_00191 [Clostridium bartlettii DSM
           16795]
          Length = 494

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 102/296 (34%), Gaps = 46/296 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR------EYYINDAGAQINT 176
           + +PTG +H+G  R A+     A       ++     + TR      E  +N        
Sbjct: 9   APSPTGFVHIGSLRTALYNYLFAKKMGGKYILRVEDTDRTRLVDGAIENMLN------AM 62

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               V       L +N + + +G Y G Y++    ++  KY  ELL+  +  +       
Sbjct: 63  KWAGVNHDEGVMLDDNGNVVQKGEY-GPYIQSERLDIYKKYIQELLDNGK-AYYCFCTKE 120

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPK 295
            +  + +  ++              E   + G      ++ ID     G  Y   L  P+
Sbjct: 121 RLDEVREKQKE------------AGETPRYDGHCRDLTQEEIDAKIAAGEPYVIRLRLPE 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
           +   +  D+ R +  F +  +    D+ L+K+DG  TY     A     +     ++I  
Sbjct: 169 NHVIKFTDLVRGETEFNTNDLD---DQVLIKTDGFPTYHF---AVVVDDHLMKITHVIR- 221

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            G +      +   +  A   +  +   L   L     +    K+SKR GD     
Sbjct: 222 -GEEWVSSTPKHVYLYEAFGWEAPKFVHLPNIL-----NKEKKKLSKRQGDVAVED 271


>gi|148826875|ref|YP_001291628.1| valyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|172048054|sp|A5UEN9|SYV_HAEIG RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|148718117|gb|ABQ99244.1| valyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81481385|sp|Q8R9L3|SYI_THETN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 932

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 105/305 (34%), Gaps = 30/305 (9%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPI 273
              L    E  W P   +  +  M++  +D      +   +   IF  E   + G P   
Sbjct: 426 EEALKAIKEVNWYPAWGEERITNMVRDRKDWCISRQRVWGVPIPIFYCE---NCGKPLIN 482

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            + I+ +       +         + ++   +  +    ST    + D   +  D   ++
Sbjct: 483 DETINAVKE--LFRQKGSDAWFEMSAEEILPEGIKCECGSTKFRKETDIMDVWFDSGSSH 540

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
                A  +   +  +   +Y+ GSD   G+ +     A A   K    NVL    V   
Sbjct: 541 A----AVLETHPDLKWPAELYLEGSDQHRGWFQSSLLTAVATRGKAPYKNVLTHGFVV-- 594

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ +    V+ E G+D +R  ++    +  +      +K+ ++     
Sbjct: 595 -DGEGRKMSKSLGNVVDPAEVIQEYGADVLRLWVVSADYTADMRTSPEILKQIAE----- 648

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                Y + R+  R       D D D   ++++P E   +  +  L   L    + +  +
Sbjct: 649 ----VYRKIRNTARFLLGNLYDFDPD---KDMLPYEELLEIDKWAL-YRLNRLVKQLTES 700

Query: 513 TIAQE 517
               E
Sbjct: 701 FDKYE 705


>gi|256761215|ref|ZP_05501795.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256682466|gb|EEU22161.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|255970840|ref|ZP_05421426.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256958166|ref|ZP_05562337.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860819|ref|ZP_07106906.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307275085|ref|ZP_07556239.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899334|ref|ZP_07758668.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312952220|ref|ZP_07771097.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|255961858|gb|EET94334.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256948662|gb|EEU65294.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849858|gb|EFK77608.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306508203|gb|EFM77319.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310629807|gb|EFQ13090.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293536|gb|EFQ72092.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315036220|gb|EFT48152.1| valyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315154542|gb|EFT98558.1| valyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315160097|gb|EFU04114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315169319|gb|EFU13336.1| valyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315174736|gb|EFU18753.1| valyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|229846754|ref|ZP_04466861.1| valyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810243|gb|EEP45962.1| valyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|229547604|ref|ZP_04436329.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548188|ref|ZP_04436913.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|256852478|ref|ZP_05557854.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257091151|ref|ZP_05585512.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902616|ref|ZP_07761821.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229306667|gb|EEN72663.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307294|gb|EEN73281.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256712332|gb|EEU27364.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256999963|gb|EEU86483.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633954|gb|EFQ17237.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315030884|gb|EFT42816.1| valyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315163283|gb|EFU07300.1| valyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578975|gb|EFU91166.1| valyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|145631357|ref|ZP_01787128.1| valyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983016|gb|EDJ90520.1| valyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|319407437|emb|CBI81088.1| Valyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 907

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 32/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D +       G  V  +  ++ AG     +            
Sbjct: 45  PNVTGSLHMGHALNTTIQDIMVRFQRMQGKNVLWQPGMDHAGIATQMV------------ 92

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V ++LA++          EK++  V  +  +A   +I + L
Sbjct: 93  -------------------VERQLAERQEPTRQEMGREKFIERVWKWRHEAG-GMITNQL 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           K L +  D          G    +R++   L +QG +Y+ 
Sbjct: 133 KRLGVSCDWSRERFTMDEGLSQAVREVFVKLYKQGLIYKD 172


>gi|315150958|gb|EFT94974.1| valyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|295114302|emb|CBL32939.1| valyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|257080637|ref|ZP_05574998.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|307290155|ref|ZP_07570074.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|256988667|gb|EEU75969.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|306498783|gb|EFM68281.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|255974415|ref|ZP_05425001.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|307281862|ref|ZP_07562078.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|255967287|gb|EET97909.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|306503893|gb|EFM73114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 930

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 17/169 (10%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     A A   +     VL    V    DG   KMSK  G+ I  + 
Sbjct: 557 YLEGSDQHRGWFQSSLLTAVASRGRAPYKTVLTHGFVV---DGEGRKMSKSIGNVIYPQE 613

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G+D +R  +        +      +K+ ++          Y + R+ FR      
Sbjct: 614 VIKQYGADILRLWVASADYKADIRISNDILKQMAE---------VYRKIRNTFRYLIGNL 664

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            D D D   R+ +  +   +     L+  L      +  A    E + L
Sbjct: 665 ADFDPD---RDCVGYDQLTELDRWALLR-LERVRERVTKAYDEYEFHLL 709


>gi|326389978|ref|ZP_08211541.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994038|gb|EGD52467.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 932

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 102/305 (33%), Gaps = 30/305 (9%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPI 273
              L    E  W P   +  +  M++  RD      +   +   IF  E     G P   
Sbjct: 426 EEALKAIKEVNWYPSWGEERITNMVRDRRDWCISRQRVWGVPIPIFYCEK---CGKPLIN 482

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D I+ +       +         + ++           ST    + D   +  D   ++
Sbjct: 483 DDTINAVKE--IFRQKGSDAWFEMSAEEILPKGITCECGSTKFRKETDIMDVWFDSGSSH 540

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
            AA L       +   +  +Y+ GSD   G+ +     + A   K    NVL    V   
Sbjct: 541 -AAVLQTHPD-LKWPAE--LYLEGSDQHRGWFQSSLLTSVATRGKAPYRNVLTHGFVV-- 594

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ I    V+ E G+D +R   +    +  +      +K+ ++     
Sbjct: 595 -DGEGRKMSKSLGNGIDPADVIKEYGADILRLWTVSADFTSDMRISQEILKQMTE----- 648

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY + R+  +       D D D   ++++P E   +  +  L   L      +  A
Sbjct: 649 ----AYRKIRNTSKFLLSNLYDFDPD---KDMLPYEELLEIDKWAL-YRLNRVVEELTEA 700

Query: 513 TIAQE 517
               E
Sbjct: 701 FDKYE 705


>gi|325577894|ref|ZP_08148127.1| valine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160324|gb|EGC72451.1| valine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 968

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 24  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 83

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 84  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 113 KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 171

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 172 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 207


>gi|319654845|ref|ZP_08008920.1| glutamyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393408|gb|EFV74171.1| glutamyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 485

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 99/294 (33%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A   +  G  + R   I D   + N          Y +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR--SKGGKFIIR---IEDTDKKRNIEGGEESQLHYLK 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKII 245
            L  + D  +      G Y +     + + Y  ELL+     K     ++   +   +  
Sbjct: 65  WLGMDWDESIDLEGEFGPYRQSERNHIYETYYKELLDKGHAYKCYCTEEELEAEREAQSA 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + D  A + +                   D    L  +G         PK +     DM 
Sbjct: 125 KGDTPAYSGKCRHL-------------TEDERAALEAEGRKPSIRFLVPKGRELTFNDMV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG+ TY   + A     +     +++   G DH     
Sbjct: 172 KGEVSFESEGFGDF---VIVKKDGTPTY---NFAVAVDDHLMKISHVLR--GDDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           + + +  A+         +      L  +    K+SKR    I      +E+G 
Sbjct: 224 KQQMIYEALGWDIPTFGHM-----TLIVNESRKKLSKRDETIIQFIEQYEELGY 272


>gi|307288317|ref|ZP_07568312.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306500703|gb|EFM70025.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165976|gb|EFU09993.1| valyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|257088072|ref|ZP_05582433.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256996102|gb|EEU83404.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315028135|gb|EFT40067.1| valyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|257083370|ref|ZP_05577731.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256991400|gb|EEU78702.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315171826|gb|EFU15843.1| valyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327536084|gb|AEA94918.1| valine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|256962803|ref|ZP_05566974.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272656|ref|ZP_07553904.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256953299|gb|EEU69931.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510651|gb|EFM79673.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|68250091|ref|YP_249203.1| valyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335485|sp|Q4QKA4|SYV_HAEI8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68058290|gb|AAX88543.1| valyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|329729466|gb|EGG65869.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 466

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 137/421 (32%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +     + +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMHHMGEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYH----ELGSTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EV  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++       +     E      Q+   L ++  V+++         +  + YDLA + + 
Sbjct: 325 IEE---REQIATDLEEQSEYIQQIDKILNQFEAVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|328948245|ref|YP_004365582.1| glutamyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448569|gb|AEB14285.1| glutamyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 525

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 104/307 (33%), Gaps = 54/307 (17%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR--EYYIND 169
            +  +V + + + +PTG  H+G  R A+     A       ++     + TR  E Y+ +
Sbjct: 1   MENKEVRVRY-APSPTGLQHIGGVRTALFNYLFARSKGGKFILRLEDTDRTRYDEKYVKN 59

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
               ++ L +           + D    +G   G Y++    EL  KY+ EL+   E  +
Sbjct: 60  LYDTMDWLGI-----------DWDEGGDKGGEYGPYVQSERFELYKKYAQELVEKGE-AY 107

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   ++ + KI  ++                + R       + +      G  Y  
Sbjct: 108 YCFCDSERLERIRKIQTENKMPPG-----------YDRNCRHLTEEEVKANLAAGKPYVI 156

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            L  P    T+  D     +++++  +    D  LLKSDG  TY  A++       +   
Sbjct: 157 RLKVPLEGETKFTDHLLGDIVWKNEDISP--DPVLLKSDGFPTYHLANI------VDDHL 208

Query: 350 DNMIYVMGSDH-----SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             + +VM +         +V+       A   +  +        + +       K+SKR 
Sbjct: 209 MKISHVMRAQEWIPSTPLHVQMY----RAFGWEHPEFCH-----LPMVNGSDGKKLSKRH 259

Query: 405 GDFITLR 411
           G      
Sbjct: 260 GSTSLNE 266


>gi|308171982|ref|YP_003918687.1| glutamyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604846|emb|CBI41217.1| glutamyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 483

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 98/292 (33%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---SQGGKFIIRIEDTDKKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +I R 
Sbjct: 67  GMDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEKGLAYKCFCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + QH     E+              +    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGQHRNLTQEEQ-------------EQFLAEGRQPSIRFRVPEGKIIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAIDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A         + +   + L  +    K+SKR    I      +E+G 
Sbjct: 226 IMIFQAFGWD-----IPVFGHMTLIVNESRKKLSKRDESIIQFIEQYEELGY 272


>gi|293390451|ref|ZP_06634785.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950985|gb|EFE01104.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYKHWEESGYFKPSEEANAPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A + +    ++  E ++  + ++  Q+    I   ++ L    D          G   
Sbjct: 99  KIAAEENKTRHDYGREAFIDKIWEWKAQSG-GTISQQIRRLGNSVDWTRERFTMDDGLSD 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|94266428|ref|ZP_01290123.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93452970|gb|EAT03469.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 128/374 (34%), Gaps = 62/374 (16%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH    VV DT+A      G EV  +   ++ G +I            
Sbjct: 11  YVNAQP----HLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKI-----------V 55

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--I 244
            A    + DL E       L      L +      +   +   + +V+    Q   +  I
Sbjct: 56  GAAKEAEVDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDI 115

Query: 245 IRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKT 298
              D   L  +  + F++E +   G     +     +  Q Y      Y+  L     + 
Sbjct: 116 YFSDYAGLYCRGCERFLTEKELVDGKCPDHQVAPAEIREQNYFFKMSRYQQWLIDHIKEH 175

Query: 299 TQKCDMDRKQ---LLFRSTMVGDD-VDRPLLKSD-GSYTYFAADLAYFKCKYERGFDNMI 353
            +    +R +   L F S  + D  + RP+ + + G    F  +   +       FD +I
Sbjct: 176 PEFITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVW-----FDALI 230

Query: 354 -YVMG---------------SDH-------SGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y+ G               ++H         +      +  A+     +   +      
Sbjct: 231 NYISGIGYPDAPDFAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYW-- 288

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              +    KMSK  G+ +  + +V++ G+D+VR+ +L R+ S  LD  +      ++ N 
Sbjct: 289 ---NVNEAKMSKSIGNVVRPQDMVEQFGADTVRYFLL-REMSFGLDASYSDEAVLARRNA 344

Query: 451 VFYVQYAYARCRSI 464
                      RS+
Sbjct: 345 DLANDLGNLFSRSL 358


>gi|331089040|ref|ZP_08337946.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330406240|gb|EGG85759.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 633

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 129/409 (31%), Gaps = 66/409 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   A
Sbjct: 3   EKQKYYITTAIAYTSGKPHIGNTYEIVLADAVARYKRSQGYDVFFQTGTDEHGQKIELKA 62

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  ++ +    +++         +  +     DK+        E++   I K    
Sbjct: 63  EEAGVTPKEFVDGVSAEIK-------KIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYD 115

Query: 239 QAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           Q    I +   + +     + F +E     G        +     + Y ++      +  
Sbjct: 116 QG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRLI 173

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--N 351
                  +  Q + R   + ++   P             DL   +  ++ G    FD  +
Sbjct: 174 EHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDDKH 223

Query: 352 MIYVM-------------GSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           ++YV               +D      Y K   A    + +   + + +   +  L   G
Sbjct: 224 VVYVWLDALTNYITGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIF-LMALG 282

Query: 396 MPI---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
           +P+               KMSK  G+ +    +VD  G D+VR+ +L            +
Sbjct: 283 LPLPKQVFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITW 342

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
             + E+   +    +     R  S+  +        K    D+D DL  
Sbjct: 343 ELMVERLNSDLANTLGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKA 391


>gi|257420570|ref|ZP_05597560.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257162394|gb|EEU92354.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156411|gb|EFU00428.1| valyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|256618285|ref|ZP_05475131.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597812|gb|EEU16988.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|315032301|gb|EFT44233.1| valyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315145977|gb|EFT89993.1| valyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|229148497|ref|ZP_04276753.1| Glutamyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228634913|gb|EEK91486.1| Glutamyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 491

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    ++  K   +LL           +  + +  M    
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLE----------RGLAYKCYMTEEE 120

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +           E   + G+      + +     +G +       P  +     D+ 
Sbjct: 121 LEAEREGQIAR---GETPRYAGNHRELTEEQVKEFEAEGRIPSIRFRVPADRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|307266467|ref|ZP_07548002.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918508|gb|EFN48747.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 932

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 102/305 (33%), Gaps = 30/305 (9%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPI 273
              L    E  W P   +  +  M++  RD      +   +   IF  E     G P   
Sbjct: 426 EEALKAIKEVNWYPSWGEERITNMVRDRRDWCISRQRVWGVPIPIFYCEK---CGKPLIN 482

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D I+ +       +         + ++           ST    + D   +  D   ++
Sbjct: 483 DDTINAVKE--IFRQKGSDAWFEMSAEEILPKGITCECGSTKFRKETDIMDVWFDSGSSH 540

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
            AA L       +   +  +Y+ GSD   G+ +     + A   K    NVL    V   
Sbjct: 541 -AAVLQTHPD-LKWPAE--LYLEGSDQHRGWFQSSLLTSVATRGKAPYRNVLTHGFVV-- 594

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ I    V+ E G+D +R   +    +  +      +K+ ++     
Sbjct: 595 -DGEGRKMSKSLGNGIDPADVIKEYGADILRLWTVSADFTSDMRISQEILKQMTE----- 648

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY + R+  +       D D D   ++++P E   +  +  L   L      +  A
Sbjct: 649 ----AYRKIRNTSKFLLSNLYDFDPD---KDMLPYEELLEIDKWAL-YRLNRVVEELTEA 700

Query: 513 TIAQE 517
               E
Sbjct: 701 FDKYE 705


>gi|315148803|gb|EFT92819.1| valyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|257417098|ref|ZP_05594092.1| valyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158926|gb|EEU88886.1| valyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|256960312|ref|ZP_05564483.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293388509|ref|ZP_06633013.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|312905725|ref|ZP_07764747.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909080|ref|ZP_07767940.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256950808|gb|EEU67440.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291082113|gb|EFE19076.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|310628204|gb|EFQ11487.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290642|gb|EFQ69198.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 880

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDYSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|260905420|ref|ZP_05913742.1| methionyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 573

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 140/398 (35%), Gaps = 48/398 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWRYQQ 187
           P G +H+GH    +  DT+A       +EV      ++ G ++    N L +S       
Sbjct: 12  PNGAIHIGHAYEYIAADTIARFKRLDNHEVFFATGTDEHGLKMLQAANKLGISPKELADD 71

Query: 188 ALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------VKDYSV 238
              N  D+ L  G     +++   ++  +   +      E   + +        V+D + 
Sbjct: 72  NAKNFRDTQLALGSTFDRFIRTTDEDHYEASKAIWRKLEEAGDIYLDTYAGWYSVRDEAF 131

Query: 239 QAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
               +    D   L+ +   ++  +E++ +    S  +D +  L +    + G       
Sbjct: 132 YTQDETEVVDGVRLSTETRTEVTWTEEESYFFRLSNYQDKLLELYKNHPEFIGPDSRRNE 191

Query: 297 KTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
             +      +   + R+T      + G++     +  D    Y  A  A +    ER  D
Sbjct: 192 VASFVASGLKDLSVSRTTFDWGVPVPGNEKHVMYVWIDALTNYLTA--AGYPDDQER-LD 248

Query: 351 NM----IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                 ++++G D    HS Y     A   +   +  +       L          KMSK
Sbjct: 249 KWWPADVHIIGKDIIRFHSVY---WPAFLMSAGIELPKRVHAHGFLFN-----AGEKMSK 300

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +    +VD  G D++RF  L+R+ S   D  + K    +++N     +Y     R
Sbjct: 301 SVGNVVDPIDLVDAFGLDTLRFF-LFREFSYGNDGSYTKDSIITRKNSDLANEYGNLAQR 359

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           S+   AK    + D  +     +  +   D + L L  
Sbjct: 360 SLSMIAK----NCDAQVPQPGELTDD---DEALLALAR 390


>gi|323706295|ref|ZP_08117861.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534347|gb|EGB24132.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 635

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 112/337 (33%), Gaps = 63/337 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V            +         +  Q    
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDV------------MFLTGTDEHGQKIQRKAK 61

Query: 192 NDSDLPEGYYPGVY--LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRD 247
                P+ Y   +   +K +     D  + + +   +++   IV+    +   K  I + 
Sbjct: 62  EKGVTPKQYVDEIVAWIKDL-WNTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKS 120

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G+       ++ +  + Y ++      K     +   D 
Sbjct: 121 EYEGWYCTPCETFWTEKQLVDGNCPDCGRPVELVKEESYFFKLSNYADKLLKYYEEHPDF 180

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM---- 356
            Q   R   +        +KS         DL   +  ++ G    FD  +++YV     
Sbjct: 181 IQPESRLNEM-----VSFIKSG------LEDLCVSRTSFDWGVKVPFDPKHVVYVWIDAL 229

Query: 357 ---------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG----------- 395
                     +DH    K+   A    V ++  + + ++   + +  D            
Sbjct: 230 SNYITALGYSTDHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGW 289

Query: 396 ---MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                 KMSK  G+ +  + +V + G D++R+ +L  
Sbjct: 290 LILEGGKMSKSKGNVVDPKELVSKYGVDAIRYFLLRE 326


>gi|227889741|ref|ZP_04007546.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849605|gb|EEJ59691.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 879

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKLRTQ--------------------- 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 101 ----GKDRHEMGREAFVKQVWDWK-DEYASIIKSQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RKVFVQLYNEGLIYRGEYIINWDPKLETALSD 187



 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 99/310 (31%), Gaps = 59/310 (19%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK----------- 207
           + + R   +ND G        +  +         D+ + +    G  +K           
Sbjct: 289 HNLERINVMNDNGT---MNEEAGKYAGMDRFEARDALVKDLEKEGFLIKVEPIVHSVGHS 345

Query: 208 -----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
                 V   L+ ++  ++    E+       D  V  + +     L+        ++  
Sbjct: 346 ERSGVQVEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVIS 405

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMV 316
                G    I    +   + G  Y G L  PK     + D D     F S      T+ 
Sbjct: 406 RQLWWGH--RIPAWYN--KKTGETYVG-LEAPKDSENWEQDPDVLDTWFSSALWPFSTLG 460

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAA 373
             D D    K      YF             G+D +I+   S     S +          
Sbjct: 461 WPDEDSEDFKR-----YFPT------NTLVTGYD-IIFFWVSRMIFQSLHFT-------- 500

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS- 432
              K+   +V+L  L+   RD    KMSK  G+ +    VVDE G+D++R+ +L      
Sbjct: 501 --GKRPFDDVVLHGLI---RDPQGRKMSKSLGNGVDPMDVVDEYGADALRWFLLNGTAPG 555

Query: 433 ELLDFDFCKV 442
           +   +D  K+
Sbjct: 556 QDTRYDPKKM 565


>gi|119512519|ref|ZP_01631598.1| Arginyl tRNA synthetase, anticodon binding [Nodularia spumigena
           CCY9414]
 gi|119462826|gb|EAW43784.1| Arginyl tRNA synthetase, anticodon binding [Nodularia spumigena
           CCY9414]
          Length = 553

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 26/136 (19%)

Query: 452 FYVQYAYARCRSIF----RQAKDIFPDLDFDLFPRNVIP------QESEFDTSELQLIVH 501
           F +QYA+ARC S+     R+      +   +L     IP      +      +E +LI  
Sbjct: 135 FTIQYAHARCCSLLLLAHREGLIKLTEPMPNLVSIEQIPWLNDEQKLRLSHPAEGRLIAE 194

Query: 502 L------AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           L       E P +  +  +  E  K+A    +L+  F   WS  R   +++    +  +L
Sbjct: 195 LVEVIDNLECPDL--SGAVNWE--KVA---LNLSQAFEAFWSQCRIWGKVKI---SFPEL 244

Query: 556 TMMRLQLVHAVASIIN 571
           +  RL LV A+ S++ 
Sbjct: 245 SQARLGLVIAIQSVLR 260


>gi|332523554|ref|ZP_08399806.1| valine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314818|gb|EGJ27803.1| valine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 883

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 78/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +        +I     N TG +H+GH     + D +   
Sbjct: 10  NPTEVEAGRYDKWLEEDVFKPSGDKTAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 99  -REQGITRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L ++G++Y G                 +    D +   +  T + +D  R L  
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMTYMLEDGSRGLQV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|291320537|ref|YP_003515801.1| glutamyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752872|emb|CBH40847.1| Glutamyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 463

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 127/405 (31%), Gaps = 80/405 (19%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  L         +    +   +Q+  L  
Sbjct: 9   APSPTGYLHIGGARTALFCYLFAKHYNGSFVFRLED----TDVKRNVADGERSQLENLKW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +    +   + ++EL+           K Y   
Sbjct: 65  L-------GIIPDESPLNPKEKYGKYRQSEKLDRYREIANELVQKGL-----AYKAYDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +++ R + +   I           +  +   I D       +   Y      PK    
Sbjct: 113 EELEMQRSEAEKKGIA-------SFRYDKNWLKINDEEKQKRDKAGEYSIRFSMPKDVVY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R ++ F S  +GD     + KSDG  TY   + A     ++    +++   G +
Sbjct: 166 EWDDIVRGEISFDSNDIGDW---VIQKSDGYPTY---NFAVVVDDFDMEITHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R  ++  A+  K  +        + +  +    K+SKR              G 
Sbjct: 218 HITNTPRQLSIYKALGWKAPEFGH-----LTVITNMEGKKLSKRDTSLKQFIEDYKNDGY 272

Query: 420 D--------------------------SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D                           +      R +     FD  K++  SK+    Y
Sbjct: 273 DPHAIFNFLSLLGWTSADNSEVMTHDEIIAKFDPSRLSKSPSKFDIKKMQWFSKQ----Y 328

Query: 454 VQYAYARCRSIFRQ---AKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           ++       SI +Q     D + +L  D F ++V   +      E
Sbjct: 329 IK--NMDNESIIKQLNLNNDEWTNLFVDTFKQSVFALKQLLVEKE 371


>gi|270291201|ref|ZP_06197424.1| glutamyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280597|gb|EFA26432.1| glutamyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 495

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               ++ + + + +PTG +H+G+ R A+     A       ++     + +R    +   
Sbjct: 1   MAKQEIRVRY-APSPTGHLHIGNARTALFNYLFARHYKGKFILRIEDTDQSR-NIADGEQ 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI+ L      ++    ++   D P  Y  G Y +   KE+      +L+         
Sbjct: 59  SQIDNL------KWLGMDWDEGPDKPGDY--GPYRQSERKEIYQPLIDQLVAEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             + Y  +  +   R++ +  N +   ++  D++    P      I +    G       
Sbjct: 106 AYESYMTEEELAAQREE-QRANGEMPHYV--DEYAGLSPEEKAQKIADAKAAGIQPVIRF 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFD 350
             P+ K  +  D+ +  + F S  +G D    + K DG  TY FA  +     K    F 
Sbjct: 163 KVPEHKKYEWDDIVKGHVAFDSETIGGDF--VIQKRDGMPTYNFAVVVDDHMMKISHVFR 220

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
                 G DH     +   +  A+  +  +       +  +       K+SKR    +  
Sbjct: 221 ------GDDHVANTPKQLMIYEALGWEAPKFGH----MSLIINSETGKKLSKRDETILQF 270

Query: 411 RHVVDEVGS 419
                 +G 
Sbjct: 271 IEQYRSLGY 279


>gi|188581532|ref|YP_001924977.1| isoleucyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345030|gb|ACB80442.1| isoleucyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 993

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 103/307 (33%), Gaps = 45/307 (14%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   I     ++       +     F +            DV      S  ++ +   D 
Sbjct: 535 VNARIAEAFAAEGADAWFTEGAAARFLAPDHDPARYDKVTDVLDVWFDSGSTHAFVLDDA 594

Query: 339 AYF------KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVR 390
           A F      +   + G D ++Y+ GSD   G+ +    +  +   +  A  +V+L     
Sbjct: 595 AAFPGLAGIRRAVDGGPDTVMYLEGSDQHRGWFQSS--LLESCGTRGHAPYDVVLTHGFV 652

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  D    KMSK  G+ +  ++V+ E G+D +R  +     S+ L      VK  ++   
Sbjct: 653 L--DAKGEKMSKSRGNVVAPQNVIKESGADILRLWVAAADYSDDLRIGPEIVKTFAE--- 707

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                  Y + R+  R              P + +P  +E    E  ++  LA+    I 
Sbjct: 708 ------TYRKLRNSLRWMLGSLAHR----VPGDDVP-FAEMPELERFILHRLAQLDGEIR 756

Query: 511 NATIAQEPYKLAFYLYD--LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            A  A +  ++   L +  +       +   R++         +   ++ R     A   
Sbjct: 757 EAYAAFDTKRIVA-LLNGFMTGDLSAFYFDVRKDALYC-----DPISSVTR----RAALQ 806

Query: 569 IINSGLN 575
           +I+    
Sbjct: 807 VIDEAFR 813


>gi|119962681|ref|YP_948227.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119949540|gb|ABM08451.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 519

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 60/418 (14%), Positives = 123/418 (29%), Gaps = 49/418 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G+EV      ++ G ++   A       +Q    
Sbjct: 18  PNGVPHIGHAYEVIATDAMARFKRLDGHEVFFMTGTDEHGLKMQQSAEKEGLTAKQLADR 77

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPE---------EKWLPIVKDYS 237
           N +   +     G     +++   ++      +                E W  +  +  
Sbjct: 78  NSAAFKQMSQDLGISHDRFIRTTDQDHYAASQAIWKKMEANGDIYLSKYEGWYSVRDEAY 137

Query: 238 VQAMMKIIRDDLKALNIQHDIFIS---EDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
                 +++DD    + + D  ++   E+ +     +    ++     Q           
Sbjct: 138 YVEDDTVVKDDGLRYSKETDTLVTWTAEESYFFRLSNYQDKLLALYEEQPEFGAPQSRFN 197

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKY 345
            +     +  +   + R    +   + GD+     +  D    Y       D+     K 
Sbjct: 198 EVISFVRRGLEDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYLTGVGYPDIESESFKK 257

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               D  ++V+G D    + R  A+        A + +    ++  +     +KMSK  G
Sbjct: 258 FWPAD--VHVIGKD----ISRFHAIYWPAFLMSAGLELPKRVMIHGFLTNNGVKMSKSLG 311

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + +  +  V + G D  R+  L         F           N    V     R  S  
Sbjct: 312 NVVAPQDFVAQYGLDQCRYFFLREVP-----FGAD-----GNYNHEAIVG----RMNSDL 357

Query: 466 RQAKDIFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
                        +  +N    +P+  EF   +  L+    E       A   QE  +
Sbjct: 358 ANNFGNLAQRSLSMVAKNCEGRVPEPGEFTAEDKALLAQAGELLDTARAAFDKQEFSR 415


>gi|319776324|ref|YP_004138812.1| valyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317450915|emb|CBY87141.1| valyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEKSGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|16273301|ref|NP_439545.1| valyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580773|ref|ZP_05848599.1| valyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174549|sp|P43834|SYV_HAEIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1574225|gb|AAC23038.1| valyl-tRNA synthetase (valS) [Haemophilus influenzae Rd KW20]
 gi|260092590|gb|EEW76527.1| valyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 954

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQRWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|229067853|ref|ZP_04201170.1| Glutamyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715212|gb|EEL67071.1| Glutamyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 491

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    ++  K   +LL           +  + +  M    
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLE----------RGLAYKCYMTEEE 120

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +           E   + G+      + +     +G +       P  +     D+ 
Sbjct: 121 LEAEREGQIAR---GETPRYAGNHRELTEEQVKEFEAEGRIPSIRFRVPADRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|116493039|ref|YP_804774.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116103189|gb|ABJ68332.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 888

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 59/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        V   ++  N   K    +I     N TG +H+GH     + D L   
Sbjct: 12  DPQSVEHGRYQKWVEQGQFKPNGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L             GV    +G+E 
Sbjct: 72  KRMLGYDTV-------WIPGMDHAGIATQAKVEAKLRE----------QGVSRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                 I      + +  D          G    +
Sbjct: 114 --KFVDQVWEWKDE-------------YADTIHQQWAKMGLSLDYDRERFTLDEGLSKAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +G +Y G          +    D
Sbjct: 159 KKVFVTLYEKGLIYRGEYIINWDPQARTALSD 190



 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSK 402
           ++R F     V G D   +      +  ++    K+   +VLL  L+   RD    KMSK
Sbjct: 478 FKRYFPTSTLVTGYD-IIFFWVARMIFQSLEFTGKRPFKDVLLHGLI---RDEQGRKMSK 533

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
             G+ I    V+D+ G+D++R+ +     + + L F + K+   
Sbjct: 534 SLGNGIDPMDVIDKYGADALRWFLSNGSTAGQDLRFSYDKMDSA 577


>gi|329114391|ref|ZP_08243153.1| Isoleucyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696467|gb|EGE48146.1| Isoleucyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 971

 Score = 54.2 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 94/308 (30%), Gaps = 52/308 (16%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAA 336
           R   V + ++   + +                    DD D+     D     GS      
Sbjct: 522 RDADVMQRVVAAFQEEGADAWYSSEPARFLGPDRNPDDYDQVFDIVDVWFESGSTH---- 577

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYR 393
             A+        F   +Y+ GSD   G+ +    +  +V  +       V+    V    
Sbjct: 578 --AFVLGHPGLNFPADLYLEGSDQHRGWFQSS--LLESVGTRGVSPYKAVVTNGFV---L 630

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ I  + V D +G+D +R  ++    ++ L      +K+Q +      
Sbjct: 631 DEQGRKMSKSLGNVIAPQDVNDSLGADVLRLWVVNSDTNDDLRIGKEILKQQGEL----- 685

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
               Y R R+  R           D +        +E    E  ++  L E   +I  A 
Sbjct: 686 ----YRRLRNTLRWLLGA-----LDGYTEAEAVPYAELPELERWVLHRLTELGGLIARAV 736

Query: 514 IAQE-----P--YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
              E     P  +          +     +   R++  L     ++      R  L    
Sbjct: 737 ETHEWVGVYPALHGFCT------TDLSAFYFDIRKD-ALYCDAPSDPTRRAARTVL---- 785

Query: 567 ASIINSGL 574
             I++  L
Sbjct: 786 -DILHRCL 792


>gi|268319720|ref|YP_003293376.1| hypothetical protein FI9785_1249 [Lactobacillus johnsonii FI9785]
 gi|262398095|emb|CAX67109.1| valS [Lactobacillus johnsonii FI9785]
          Length = 879

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K      +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPNEVEKGRYQEWLDEDLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKLRTQ--------------------- 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +      E ++  V D+       II+     + +  D         +G    +
Sbjct: 101 ----GKDRHEMGREAFVKQVWDWK-DEYASIIKSQWAKMGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RKVFVQLYNEGLIYRGEYIINWDPKLETALSD 187



 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 101/308 (32%), Gaps = 55/308 (17%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + + R   +ND G               +A      DL E  +  + ++ +   +     
Sbjct: 289 HNLERINVMNDNGTMNEEAGKYAGMDRFEARDALVKDLKEEGFL-IKVEPIVHSVGHSER 347

Query: 219 SELLNFPE--EKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           S +   P   ++W   +K            D  V  + +     L+        ++    
Sbjct: 348 SGVQVEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ 407

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGD 318
              G    I    +   + G +Y G L  PK     + D D     F S      T+   
Sbjct: 408 LWWGH--RIPAWYN--KKTGEIYVG-LEAPKDSENWEQDPDVLDTWFSSALWPFSTLGWP 462

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVS 375
           D D    K      YF             G+D +I+   S     S +            
Sbjct: 463 DEDSEDFKR-----YFPT------NTLVTGYD-IIFFWVSRMIFQSLHFT---------- 500

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-EL 434
            K+   +V+L  L+   RD    KMSK  G+ +    VVDE G+D++R+ +L      + 
Sbjct: 501 GKRPFDDVVLHGLI---RDPQGRKMSKSLGNGVDPMDVVDEYGADALRWFLLNGTAPGQD 557

Query: 435 LDFDFCKV 442
             +D  K+
Sbjct: 558 TRYDPKKM 565


>gi|294791589|ref|ZP_06756737.1| methionine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294456819|gb|EFG25181.1| methionine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 648

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 116/338 (34%), Gaps = 64/338 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + +   +E+   +V+    +A  K  I + + 
Sbjct: 69  TPFEYTTNIVNGFKALWEKMHIS---NDDFIRTTDERHEKVVQALFTKAYEKGDIYKAEY 125

Query: 250 KALNIQHDIFISEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +      D     +   +  P+         ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPDETFWTE--QKLGPNHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V + L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRRNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPIPLIDTYGADSLRYYLLSE 330


>gi|300775879|ref|ZP_07085739.1| glutamate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505429|gb|EFK36567.1| glutamate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 502

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 94/278 (33%), Gaps = 20/278 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G E        D    +      +    +  
Sbjct: 9   APSPTGPLHLGGVRTALYDYLFA---KNQGGEFVLRIEDTDTARYVEGAEEYIEEALEWC 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D    +G     Y +   +++ D+Y+ ++L             +     +  IR +
Sbjct: 66  GIIPDESPKKGGKFAPYRQSERRDIYDRYTEQILKTD-----YAYIAFDTAEELDAIRAE 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A            +  R   +   D +  L  +   Y      P  +     D+ R +
Sbjct: 121 YEARGDVFSYDNKTRNRLRNSLALSEDEVQRLLDEKIPYVVRFKMPVDRVLNLEDIIRGK 180

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
               +  +    D+ L+K+DG  TY  A++      +E    ++I   G +    +    
Sbjct: 181 FSVNTNTLD---DKVLVKNDGMPTYHFANI---IDDHEMEISHVIR--GEEWLPSLGLHT 232

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +  A+  +  Q   L   L    +     K+SKR GD
Sbjct: 233 LLYEAMQWEAPQFAHLSLILKPEGKG----KLSKRDGD 266


>gi|325687152|gb|EGD29175.1| valine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 882

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/267 (10%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    ++     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSVVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E +L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|304385486|ref|ZP_07367831.1| glutamate--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328693|gb|EFL95914.1| glutamate--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 501

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 103/298 (34%), Gaps = 36/298 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     + +R    +   +QI+ L     
Sbjct: 17  APSPTGHLHIGNARTALFNYLFARHYKGKFILRIEDTDQSR-NIADGEQSQIDNL----- 70

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            ++    ++   D P  Y  G Y +   KE+      +L+           + Y  +  +
Sbjct: 71  -KWLGMDWDEGPDKPGDY--GPYRQSERKEIYQPLIDQLVAEG-----KAYESYMTEEEL 122

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R++ +  N +   ++  D++    P      I +    G         P+ K  +  
Sbjct: 123 AAQREE-QRANGEMPHYV--DEYAGLSPEEKAQKIADAKAAGIQPVIRFKVPEHKKYEWD 179

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D+ +  + F S  +G D    + K DG  TY FA  +     K    F       G DH 
Sbjct: 180 DIVKGHVAFDSETIGGDF--VIQKRDGMPTYNFAVVVDDHMMKISHVFR------GDDHV 231

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +   +  A+  +  +       +  +       K+SKR    +        +G 
Sbjct: 232 ANTPKQLMIYEALGWEAPKFGH----MSLIINSETGKKLSKRDETILQFIEQYRSLGY 285


>gi|257784309|ref|YP_003179526.1| glutamyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472816|gb|ACV50935.1| glutamyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 504

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 103/291 (35%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + TR    N    QI  +  ++ 
Sbjct: 11  APSPTGKLHIGGARTAIYNWAFARANGGKFILRIDDTDPTRSTEEN---TQI--ILRAMK 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D    +G   G Y +    +L  + +++LL           K Y      
Sbjct: 66  WLGLDWDEGPD----KGGDCGPYSQTERLDLYREAANKLLAEG--------KAYPCFCTP 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + + +D KA   +HD F       R  DP+  +  ID     G  Y   +  P  +    
Sbjct: 114 EKLAEDKKAAEERHDPFQGYQRTCRNIDPAEAQRRIDA----GEPYTIRIKVPLDRGDVI 169

Query: 302 C-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     + F +  + D +   + +SDG+ TY   + A      + G  ++I   G DH
Sbjct: 170 VHDAVHGDVTFNARELDDFI---IFRSDGTPTY---NFATVVDDADMGITHIIR--GDDH 221

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   V  A+         +    + L  DG   K+SKR G      
Sbjct: 222 LSNTPRQIMVYEALGAPVPTFAHIS---MILGPDGK--KLSKRHGATSVEE 267


>gi|330999223|ref|ZP_08322941.1| valine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329575289|gb|EGG56837.1| valine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 944

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 64/216 (29%), Gaps = 37/216 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +             +   L       +I+    N TG +H+GH     V D+L   
Sbjct: 14  DPASIEAKWYPFWEQQGYFKAGLEEGKPSFSIQLPPPNITGILHMGHAFNHSVMDSLTRF 73

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
              +GY        + AG   QI      V  R  +A   N  D+P              
Sbjct: 74  YRMNGYNTMWLPGTDHAGIATQI------VVERKLEAQGKNRRDMPRD------------ 115

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                      +F  E W    K+YS   ++K +R     L    D        +     
Sbjct: 116 -----------DFVNEIW--KWKEYSGGNILKQMR----RLGDTLDWDRLYFTMNDDLAK 158

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + D   +L  +G +Y G          Q    D +
Sbjct: 159 VVVDCFVDLYEKGLIYRGRRLVNWDPKLQTSVSDLE 194


>gi|331269097|ref|YP_004395589.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125647|gb|AEB75592.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 879

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 63/247 (25%), Gaps = 45/247 (18%)

Query: 89  INL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +N+     P      L         +   +        +     N TG +H+GH     +
Sbjct: 4   VNIAKTYDPKEFEDKLYEKWEEKGYFTPEVDKTKKPYTVMMPPPNITGQLHLGHALDGTL 63

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L       GY                    S  W                  PG   
Sbjct: 64  QDFLIRTKRMQGY--------------------STLW-----------------LPGEDH 86

Query: 207 KHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             +  E+  +               + +L  V D++ +     I+   + L I  D    
Sbjct: 87  ASIATEVKVEKSLLEQGLHKKEMGRDAFLEKVWDWAYKY-RDRIKTQYQKLGISADYTRE 145

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 G    +R +   L  +G +Y+G          Q    D +            + 
Sbjct: 146 RFTMDEGLNKAVRKVFVELYNEGLIYKGNRIVNWCPKCQTAISDAEIEYEEQNGHFWHIK 205

Query: 322 RPLLKSD 328
            P++ SD
Sbjct: 206 YPVVGSD 212



 Score = 37.6 bits (86), Expect = 5.9,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 92/251 (36%), Gaps = 44/251 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +            +   S KK   N +L   +   
Sbjct: 471 TEDLEYFYPTNTLVTGYD-IIFFWVAR--------MIFSGLHSMKKIPFNTVLIHGI--V 519

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+++ G+D++RFM++        D  + + K ++  N   
Sbjct: 520 RDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGN-DIRYYEEKVEAARN--- 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
                      I+  ++ +  +LD DL        +   D+ E  L     L+    V++
Sbjct: 576 -------FANKIWNASRFVMMNLDKDLM-------DKYKDSKEYTLADKWILSRINTVVK 621

Query: 511 NAT---IAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             T      E    A   YD + + F   +           +   + K   + L +++  
Sbjct: 622 EVTENIEKFEVGIAAQKTYDFMWNEFCDWY----IELVKPVLYGEDEKAKGIVLNVLN-- 675

Query: 567 ASIINSGLNII 577
             ++  GL ++
Sbjct: 676 -EVLKKGLKLL 685


>gi|312864725|ref|ZP_07724956.1| valine--tRNA ligase [Streptococcus downei F0415]
 gi|311099852|gb|EFQ58065.1| valine--tRNA ligase [Streptococcus downei F0415]
          Length = 883

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 74/267 (27%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGI------------------- 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 104 ------TRYDLGRESFLTKVWEWK-DEYAATIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|291549332|emb|CBL25594.1| valyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 881

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 52/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYDPKQIEEKLYERWCENKYFHAEVDRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G        
Sbjct: 68  RYKRMEGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGREG-------- 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                       F E  W         +     I + LK L I  D          G   
Sbjct: 113 ------------FLERTWQ------WKEEYAGTIENQLKKLGISCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++  NL  +GY+Y+G
Sbjct: 155 AVEEVFINLYNKGYIYKG 172


>gi|171778747|ref|ZP_02919843.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282704|gb|EDT48128.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 883

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPNDDRYKDLI 243


>gi|307103633|gb|EFN51891.1| hypothetical protein CHLNCDRAFT_56341 [Chlorella variabilis]
          Length = 905

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 31/215 (14%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+   + L     S   +  +    G    I     N TG +H+GH            
Sbjct: 5   FDPAASEEALYQWWESSGYFKPDESAAGEPYVISMPPPNVTGKLHMGHAM---------- 54

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                                +   A  +  RYQ+        LP   + G+  + V ++
Sbjct: 55  --------------------FVTLQASDIMTRYQRMRGRPTLWLPGTDHAGIATQMVVEK 94

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                  +  +   E +   V  +  Q     I   L+ L    D          G    
Sbjct: 95  QLAAEGRDRRSLGREAFEAEVWAWKAQYG-GFITQQLRRLGASCDWSRERFTLDEGLSEA 153

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           + +    L  +G VY G      S   Q    D +
Sbjct: 154 VLEAFVRLHDKGLVYRGSYMVNWSPGLQTAVSDLE 188



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 66/215 (30%), Gaps = 26/215 (12%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  +KD+ +   +            +  ++   DD      +   +       +G   +
Sbjct: 385 WLDNIKDWCISRQLWW--------GHRIPVWYVFDDEAAAAAAASSERYVVAKSEGEARD 436

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
             +         K + D     F S +           S   +     DL       ER 
Sbjct: 437 RAVQQYGPDVVLKQESDVLDTWFSSGL--------WPFSTLGWPNATPDL-------ERY 481

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +   +   G D   +      +   + E   +       L  L RD    KMSK  G+ +
Sbjct: 482 YPTAVMETGHD-ILFFWVARMIMMGL-ECTGRPPFHTVYLHGLVRDEKGRKMSKSLGNVV 539

Query: 409 TLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKV 442
                + + G+D++RF +       + L+    +V
Sbjct: 540 DPVETIQQYGADALRFTLATGTSPGQDLNLSLDRV 574


>gi|303257377|ref|ZP_07343391.1| valine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860868|gb|EFL83945.1| valine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 944

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 64/216 (29%), Gaps = 37/216 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +             +   L       +I+    N TG +H+GH     V D+L   
Sbjct: 14  DPASIEAKWYPFWEQQGYFKAGLEEGKPSFSIQLPPPNITGILHMGHAFNHSVMDSLTRF 73

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
              +GY        + AG   QI      V  R  +A   N  D+P              
Sbjct: 74  YRMNGYNTMWLPGTDHAGIATQI------VVERKLEAQGKNRRDMPRD------------ 115

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                      +F  E W    K+YS   ++K +R     L    D        +     
Sbjct: 116 -----------DFVNEIW--KWKEYSGGNILKQMR----RLGDTLDWDRLYFTMNDDLAK 158

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + D   +L  +G +Y G          Q    D +
Sbjct: 159 VVVDCFVDLYEKGLIYRGRRLVNWDPKLQTSVSDLE 194


>gi|282848951|ref|ZP_06258340.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581226|gb|EFB86620.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 648

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 117/338 (34%), Gaps = 64/338 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + +   +E+   +V+    +A  K  I + + 
Sbjct: 69  TPLEYTTNIVNGFKALWEKMHIS---NDDFIRTTDERHEKVVQALFTKAYEKGDIYKAEY 125

Query: 250 KALNIQHDIFISEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +      D     +   +  P+         ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPDETFWTE--QKLGPNHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V++ L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRRNEMIQFVNQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPIPLIDTYGADSLRYYLLSE 330


>gi|260888295|ref|ZP_05899558.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861831|gb|EEX76331.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 665

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 110/337 (32%), Gaps = 60/337 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  + D +A     + ++V                      +  Q    
Sbjct: 26  PSAKLHIGHAYCTTIADAVARFKRLTDHDV------------FFLTGSDEHGQKIQQKAE 73

Query: 192 NDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDD 248
            +   P  Y   +     G  +     + + +   EE+   +V++   +   K  I +  
Sbjct: 74  EEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKGK 133

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            K L     + + +E     G        +  +    Y ++      +     + + D  
Sbjct: 134 YKGLYCTPCESYWTERQLADGKCPDCGREVAEVEEDAYFFKMSHYADRVLAYIEENPDFI 193

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVMGSDHS 361
           Q + R   + + + + L            DL   +  ++ G       D++IYV     +
Sbjct: 194 QPVSRRNEMINFIKQGL-----------EDLCISRTSFDWGIPVPIAPDHVIYVWFDALT 242

Query: 362 GY------------VKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG------------- 395
            Y             ++   A    V ++  + + ++   + +  D              
Sbjct: 243 NYLTPIGFLDDPEKFEKYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLI 302

Query: 396 -MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
               KMSK  G+ +    ++DE G+D++R+ +L   N
Sbjct: 303 VDGDKMSKSKGNVVDPVQLIDEFGADAIRYFLLREIN 339


>gi|253681583|ref|ZP_04862380.1| valine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561295|gb|EES90747.1| valine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 879

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 64/247 (25%), Gaps = 45/247 (18%)

Query: 89  INL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +N+     P      L         +   +        I     N TG +H+GH     +
Sbjct: 4   VNIAKTYDPKEFEDKLYEKWEEKGYFTPEVDKTKKPYTIMMPPPNITGQLHLGHALDGTL 63

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L       GY                    S  W                  PG   
Sbjct: 64  QDFLIRTKRMQGY--------------------STLW-----------------LPGEDH 86

Query: 207 KHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
             +  E+  +               E +L  V D++ +     I+   + L I  D    
Sbjct: 87  ASIATEVKVEKSLLEQGLHKKEMGREAFLEKVWDWAYKY-RDRIKTQYQKLGISADYTRE 145

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 G    +R +  +L  +G +Y+G          Q    D +            + 
Sbjct: 146 RFTMDEGLNKAVRKVFVDLYNEGLIYKGNRIVNWCPKCQTAISDAEIEYEEQNGHFWHIK 205

Query: 322 RPLLKSD 328
            P++ SD
Sbjct: 206 YPVVDSD 212



 Score = 37.2 bits (85), Expect = 8.6,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 92/251 (36%), Gaps = 44/251 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +            +   S KK   N +L   +   
Sbjct: 471 TEDLEYFYPTNTLVTGYD-IIFFWVAR--------MIFSGLHSMKKIPFNTVLIHGI--V 519

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+++ G+D++RFM++        D  + + K ++  N   
Sbjct: 520 RDSQGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGN-DIRYYEEKVEAARN--- 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
                      I+  ++ +  +LD DL        +   D+ E  L     L+    V++
Sbjct: 576 -------FANKIWNASRFVMMNLDKDLM-------DKYKDSKEYTLADKWILSRINTVVK 621

Query: 511 NATI---AQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
             T      E    A   YD + + F   +           +   + K   + L +++  
Sbjct: 622 EVTENIDKFEVGIAAQKTYDFMWNEFCDWY----IELVKPVLYGEDEKAKGIVLNVLN-- 675

Query: 567 ASIINSGLNII 577
             ++  GL ++
Sbjct: 676 -EVLKKGLKLL 685


>gi|251792950|ref|YP_003007676.1| valyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534343|gb|ACS97589.1| valyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 954

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENVPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|229027935|ref|ZP_04184088.1| Glutamyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228733323|gb|EEL84152.1| Glutamyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 491

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 95/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFISED--------DFHRGDP--------SPIRDIIDNLARQGYVYEGI 290
           +DL    + +  +++E+           RG+               +     +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQISRGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|94263063|ref|ZP_01286882.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456606|gb|EAT06714.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 128/374 (34%), Gaps = 62/374 (16%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH    VV DT+A      G EV  +   ++ G +I            
Sbjct: 11  YVNAQP----HLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKI-----------V 55

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--I 244
            A    + DL E       L      L +      +   +   + +V+    Q   +  I
Sbjct: 56  GAAKEAEVDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDI 115

Query: 245 IRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKT 298
              D   L  +  + F++E +   G     +     +  Q Y      Y+  L     + 
Sbjct: 116 YFSDYAGLYCRGCERFLTEKELVDGKCPDHQVAPAEIREQNYFFKMSRYQQWLIDHIKEH 175

Query: 299 TQKCDMDRKQ---LLFRSTMVGDD-VDRPLLKSD-GSYTYFAADLAYFKCKYERGFDNMI 353
            +    +R +   L F S  + D  + RP+ + + G    F  +   +       FD +I
Sbjct: 176 PEFITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVW-----FDALI 230

Query: 354 -YVMG---------------SDH-------SGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y+ G               ++H         +      +  A+     +   +      
Sbjct: 231 NYISGIGYPDAPDFAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYW-- 288

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              +    KMSK  G+ +  + +V++ G+D+VR+ +L R+ S  LD  +      ++ N 
Sbjct: 289 ---NVNEAKMSKSIGNVVRPQDMVEQFGADTVRYFLL-REMSFGLDASYSDEAVLARRNA 344

Query: 451 VFYVQYAYARCRSI 464
                      RS+
Sbjct: 345 DLANDLGNLFSRSL 358


>gi|86134799|ref|ZP_01053381.1| glutamyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821662|gb|EAQ42809.1| glutamyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 507

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 101/291 (34%), Gaps = 44/291 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAF--SGYEVTREYYINDAGAQINTL 177
           + +PTGP+H+G  R A+          G  +  +     + Y    E YI DA    N  
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAKKHNGTFVLRIEDTDQNRYVANAEQYIIDALNWCNI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                         ND  + +    G Y +   K L  KY+  LL   E+ W     D S
Sbjct: 69  -------------PNDEGINKNEKFGPYRQSERKHLYKKYADILL---EKGWAYYAFDTS 112

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI--RDIIDNLARQGYVYEGILPPPK 295
            Q  +   R   +A            +  R   S +   +++      G  Y      P+
Sbjct: 113 EQ--LDAHRKGHEAEGKTFIYNWHNREKGRLVNSLVLSDEVVQEKINSGENYVIRFKSPQ 170

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +T +  D  R ++   +  +    D+ L KSDG  TY    LA     +     ++I  
Sbjct: 171 DETLEMEDEIRGKISIDTNTLD---DKILFKSDGMPTYH---LANIVDDHLMEISHVIR- 223

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G +    +     +  A   +  +   L   L  + +     K+SKR GD
Sbjct: 224 -GEEWLPSMALHVLLYRAFDWQAPKFAHLPLILKPVGKG----KLSKRDGD 269


>gi|260914364|ref|ZP_05920833.1| valine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631465|gb|EEX49647.1| valine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 954

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 62/222 (27%), Gaps = 36/222 (16%)

Query: 90  NL----YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           N       +PS + + L         +  +        +I     N TG +H+GH     
Sbjct: 4   NFEMADRFTPSAVEQALYKHWEESGYFKPSEDTSKPSYSIAIPPPNVTGSLHMGHAFQQT 63

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           + D L       G+    +   + AG     +                            
Sbjct: 64  LMDILIRFNRMEGHNTLWQTGTDHAGIATQMV---------------------------- 95

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +++A +      ++  E ++  + D+   +    I   ++ L    D        
Sbjct: 96  ---VERKIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTM 151

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             G    ++++   L  +G +Y G               D +
Sbjct: 152 DEGLSEAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 918

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 63/325 (19%), Positives = 112/325 (34%), Gaps = 63/325 (19%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   +LL   EE KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 416 DKIREQLLKAVEETKWVPAWGEIRIHNMIRD-RGDWCISRQRAWGVPIPVFYAE----NG 470

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         + D   + F S
Sbjct: 471 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPGSPNGRFTKETDIMDVWFDS 530

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 531 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 570

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V++++G+D +R  +      
Sbjct: 571 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASVDYQ 627

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D +        I Q  E D
Sbjct: 628 ADVRISDNILKQVAE---------VYRKIRNTFRFMLGNLFDFNPAEHTV-AIEQLREVD 677

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
                +++ L      ++ A    E
Sbjct: 678 ---RYMLIKLNRLIEKVKQAYETYE 699


>gi|156388270|ref|XP_001634624.1| predicted protein [Nematostella vectensis]
 gi|156221709|gb|EDO42561.1| predicted protein [Nematostella vectensis]
          Length = 141

 Score = 54.2 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 17/133 (12%)

Query: 451 VFYVQYAYARCRSIFRQAKD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRV 508
             ++ Y  AR   +F++ +D +   L   L   + +      D  E  L++  +  YP  
Sbjct: 3   ATFLLYNSARLSKLFQKFEDGVTLGLYPSLPSIDQVDFSLLRDEEEWTLLLRYVLMYPSA 62

Query: 509 IENATI----------AQEPY--KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           + +A                +  ++  +L  L+  F  ++         R        L 
Sbjct: 63  VSDAIQPLTSNPQHGSTLTLHTNRICCFLLSLSHEFSSYYGRVHILVEPRPHLF---PLM 119

Query: 557 MMRLQLVHAVASI 569
             RL L+ A+  +
Sbjct: 120 FARLYLIRAIQQV 132


>gi|256846924|ref|ZP_05552378.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717722|gb|EEU31281.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 887

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEEGKKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L R G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 RKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATSRPETMLGDVAVAVHPEDERYKHLI 242



 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      ++  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTVLEQGLRLL 691


>gi|254673172|emb|CBA08035.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135619|gb|EGC58236.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 929

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 91/294 (30%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      K +     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKGELLSAEDCEHYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----LKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|206972191|ref|ZP_03233138.1| glutamyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234593|ref|YP_002364937.1| glutamyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228950636|ref|ZP_04112770.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228956529|ref|ZP_04118325.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229040993|ref|ZP_04189756.1| Glutamyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229077381|ref|ZP_04210043.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229107774|ref|ZP_04237410.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229142894|ref|ZP_04271335.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229176688|ref|ZP_04304092.1| Glutamyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188373|ref|ZP_04315421.1| Glutamyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|206732765|gb|EDZ49940.1| glutamyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162550|gb|ACK62542.1| glutamate--tRNA ligase [Bacillus cereus B4264]
 gi|228595047|gb|EEK52818.1| Glutamyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606731|gb|EEK64148.1| Glutamyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228640515|gb|EEK96904.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228675623|gb|EEL30831.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228705928|gb|EEL58252.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228727290|gb|EEL78484.1| Glutamyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803094|gb|EEM49916.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228808987|gb|EEM55472.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 491

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    ++  K   +LL           +  + +  M    
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLE----------RGLAYKCYMTEEE 120

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +           E   + G+      + +     +G +       P  +     D+ 
Sbjct: 121 LEAEREGQIAR---GETPRYAGNHRELTEEQVKEFEAEGRIPSIRFRVPADRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|315282473|ref|ZP_07870879.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613881|gb|EFR87619.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 883

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           ++     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSVVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   ++++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--EANISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 163 KVFVTLYNKGLIYRGQYIINWDPEAKTALSD 193



 Score = 37.2 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           L RD    KMSK  G+ +    V+D+ G+DS+R+ +    +  + L F + KV+ 
Sbjct: 519 LVRDXEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVES 573


>gi|325290585|ref|YP_004266766.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965986|gb|ADY56765.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 892

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 36/196 (18%)

Query: 97  YLRKILSSIVVSGIE---YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +          +G +    G++  G     +I     N TG +H+GH   + + D LA  
Sbjct: 24  WEENGFFQPEAAGDKETAPGKDAAGNREAFSIVMPPPNVTGFLHLGHAMDSTLQDILARY 83

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+              +   ++   + ++ L                        
Sbjct: 84  KRMQGYDTL-------WLPGTDHAGIATQAKVEEKL------------------------ 112

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +  +       EK+L  V  +  Q   KI +  L+ L    D          G    +
Sbjct: 113 -AEEGTSRQELGREKFLERVWQWKEQYGGKITQQ-LRRLGASCDWSRERFTMDAGCSEAV 170

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L  QG +Y G
Sbjct: 171 REVFVKLYEQGLIYRG 186


>gi|251779970|ref|ZP_04822890.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084285|gb|EES50175.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 645

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 73/498 (14%), Positives = 148/498 (29%), Gaps = 139/498 (27%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D LA     +GY+V                              
Sbjct: 18  PSTKLHIGNTYTTVAADALARFKRLTGYDV--------------MFLTGT---------- 53

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK +  ++   V  ++  I+D    
Sbjct: 54  -----------------------DEHGQKIQRIAEEKGITPIE--HVDEIVAGIKDLWSM 88

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           +N+ +D FI   D +      ++DI   L  QG +Y+                       
Sbjct: 89  MNVSYDKFIRTTDEYH--VKAVQDIFKKLHDQGDIYKSSYEGWYCTPCESFWTDTQLVNG 146

Query: 296 ---SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----------KSDGSYTYFAA----DL 338
                         +   F+ +   D + + +           + +     F      DL
Sbjct: 147 NCPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEENPNFIQPESRKNEMLNNFLRPGLQDL 206

Query: 339 AYFKCKYERG----FD--NMIYVM-----------GSDHS---GYVKRLEAVAAAVSEKK 378
              +  ++ G    FD  +++YV            G        Y K   A    + +  
Sbjct: 207 CVSRTSFDWGVPVTFDENHVVYVWIDALSNYITALGYGQDNKELYDKFWPADVHLIGKDI 266

Query: 379 AQINVLLCELVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + +   ++ +  D                  KMSK  G+ +    +V+E G D VR+
Sbjct: 267 LRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNEFGVDPVRY 326

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L       + F    +      N   +++   +   +           +    F   +
Sbjct: 327 YLLRE-----IPFGADGL-----FNNEIFIKKINSDLCNDLGNLLSRSVAMIEKYFDGEI 376

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLA-FYLYDLASVFHGHWSHGREN 542
            PQ    +  E +LI     YP  ++ A      P  LA  ++++L    + +      +
Sbjct: 377 QPQAESGEFDE-ELINLALAYPNKVQEAIDELNIP--LALEHVFELIGRANKY-----ID 428

Query: 543 PRLRFVQANNRKLTMMRL 560
               ++ A +      RL
Sbjct: 429 ETTPWILAKDES-KKARL 445


>gi|325129574|gb|EGC52398.1| isoleucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 929

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|331703138|ref|YP_004399825.1| glutamyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801693|emb|CBW53846.1| Glutamyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 483

 Score = 53.8 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 120/350 (34%), Gaps = 69/350 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A++    A    ++G  + R               +Q   L    
Sbjct: 8   APSPTGFLHIGNTRTALMNYLFAK--HYNGSFIVRIEDTDLARNVDGAIESQFENLNWL- 64

Query: 182 FWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQ 239
                  ++ ++S         G Y++    +   + + +L++  +        ++    
Sbjct: 65  ------GIFPDESIFNVGDQKYGKYMQSQKFDRYKQLAEQLVDQNKAYRCFCTSEELEKD 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +  R  +     Q  +F+++D         I+  ++N       Y      P++KT 
Sbjct: 119 YEEQTSRGIIATKYSQKCLFLTQDQ--------IQKNLENKKE----YSIRFKVPENKTW 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  + F S  +GD     +LKS+G  TY   + A     Y+    +++   G +
Sbjct: 167 TINDIVRGDVSFDSKDLGDF---VILKSNGVATY---NFAVVIDDYDMQITHVLR--GEE 218

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG- 418
           H     R   +  A +    +        + L  D    K+SKR+G+ +       + G 
Sbjct: 219 HISNTPRQMMIYDAFNWNYPKFGH-----LTLIVDNTGKKLSKRSGNALFFIEQYKKQGY 273

Query: 419 -------------------------SDSVRFMMLWRKNSELLDFDFCKVK 443
                                    S+ ++     R +     FD  K+K
Sbjct: 274 LSQAIFNYIALLGWSPPGEQEILSQSELIKIFDEKRFSKSPSTFDMVKMK 323


>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 924

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 128/389 (32%), Gaps = 93/389 (23%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK  SELL    E KW+P   +  +  M++  R D      +A  +   +F  E     G
Sbjct: 415 DKIRSELLQAIKETKWIPEWGEIRIHNMVRD-RGDWCISRQRAWGVPIPVFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         + D   + F S
Sbjct: 470 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++ D        DL        R  D  +Y+ GSD   G+     + A 
Sbjct: 530 ---GSSHQAVLVERD--------DLM-------RPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V+++ G+D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQFGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ S+          Y + R+ FR       D D +     +     E  
Sbjct: 627 ADVRISDHILKQVSE---------VYRKIRNTFRFMLGNLFDFDPNQNAVPI----GELG 673

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHWSHGRE 541
             +  ++  L +    ++ A  +          YD A+V+H             +     
Sbjct: 674 EVDRYMLAKLNKLIAKVKKAYDS----------YDFAAVYHEMNHFCTVELSAFY----- 718

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASII 570
               + +       +  R     AV +++
Sbjct: 719 LDMAKDILYIEAADSRAR----RAVQTVL 743


>gi|293382180|ref|ZP_06628123.1| valine--tRNA ligase [Enterococcus faecalis R712]
 gi|291080463|gb|EFE17827.1| valine--tRNA ligase [Enterococcus faecalis R712]
          Length = 880

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +        +    +  +   K    +I     N TG +H+GH     + D +    
Sbjct: 13  PTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + ++ L             G+    +G+E  
Sbjct: 73  RMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ----------QGISRYDLGRE-- 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++  + EE                 IR+    + +  D          G    +R
Sbjct: 114 -KFVDQVWEWKEE-------------YASHIREQWAKMGLSLDSSRERFTLDEGLSEAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +L  +  +Y G          +    D
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSD 190


>gi|229053934|ref|ZP_04195368.1| Glutamyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228721352|gb|EEL72873.1| Glutamyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 491

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 97/299 (32%), Gaps = 44/299 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +V R    N AG           
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHQDGKFIIRIEDTDVKR----NVAG------GEESQ 65

Query: 183 WRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            +Y + L  + D  +  G   G Y +    ++  K   +LL           +D + +  
Sbjct: 66  LKYLKWLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYKDLLE----------RDLAYKCY 115

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M     + +           E   + G+      + I     +G +       P      
Sbjct: 116 MTEEELEAEREGQIAR---GETPRYAGNHRDLTEEQIKGFEAEGRIPSIRFRVPADSDYT 172

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH
Sbjct: 173 FKDLVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +   +  A      +   +      L  +    K+SKR    I       E+G 
Sbjct: 225 ISNTPKQMMIYEAFGWDIPKFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|302343431|ref|YP_003807960.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640044|gb|ADK85366.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 881

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 37/202 (18%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ SY    +             +  +        +I     N TG +H+GH     + 
Sbjct: 5   KLAKSYEPREVEARWYEYWQENGLFRADPQSAAPAYSIVIPPPNVTGQLHIGHALNNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L      +G+EV                           L+   +D        V  +
Sbjct: 65  DILCRFKRMNGWEV---------------------------LWMPGTDHAGIATQNVVER 97

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +E  +++     +   EK++  V  +  ++  +II   LK L    D          
Sbjct: 98  QLAQEGLNRH-----DLGREKFIERVWRWRAESGGQIINQ-LKRLGASCDWSRERFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
           G    +R++   L  +G +Y G
Sbjct: 152 GLSRAVREVFVRLYEEGLIYRG 173


>gi|126662723|ref|ZP_01733722.1| glutamyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126626102|gb|EAZ96791.1| glutamyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 502

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 102/280 (36%), Gaps = 24/280 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-GAQINTLALSVFWRYQQ 187
           + +PTGP+H+G  R A+     A      G    R   I D    +    A +  +   +
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAK--KHGGVFYLR---IEDTDQTRFVPGAEAYIFEALE 64

Query: 188 ALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L     + + +    G Y +   K +  +Y+ +L+N     W     D +    +  +R
Sbjct: 65  WLGIAPEETVGKNEKFGPYRQSERKAMYQQYADQLIN---SGWAYYAFDTA--ESLDAMR 119

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            + +A         S  D      +  R+ +      G  Y      P ++  +  D+ R
Sbjct: 120 KEAEANGNTFIYNHSVRDQLDNSLTVSREKVAERIANGEHYVIRFKTPVNEILELKDIIR 179

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + F + ++    D+ L KSDG  TY    LA     +     ++I   G +    +  
Sbjct: 180 GDIKFDTNLLD---DKVLFKSDGMPTYH---LANIVDDHLMETSHVIR--GEEWLPSMPL 231

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              +  A      +    L  +++   +G   K+SKR GD
Sbjct: 232 HVLLYKAFGWNAPEFAH-LPLILKPIGNG---KLSKRDGD 267


>gi|258541833|ref|YP_003187266.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632911|dbj|BAH98886.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635968|dbj|BAI01937.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639023|dbj|BAI04985.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642077|dbj|BAI08032.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645132|dbj|BAI11080.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648187|dbj|BAI14128.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651240|dbj|BAI17174.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654231|dbj|BAI20158.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 971

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 91/296 (30%), Gaps = 47/296 (15%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAA 336
           R   V + ++   K +                    DD D+     D     GS      
Sbjct: 522 RDADVMQRVVDAFKEEGADAWYSSEPARFLGPDRNPDDYDQVFDIVDVWFESGSTH---- 577

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYR 393
             A+   +    F   +Y+ GSD   G+ +    +  +V  +       V+    V    
Sbjct: 578 --AFVLGQPGLSFPADLYLEGSDQHRGWFQSS--LLESVGTRGVSPYKAVVTNGFV---L 630

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ I  + V D +G+D +R  ++    ++ L      +K+Q +      
Sbjct: 631 DEQGRKMSKSLGNVIAPQDVNDSLGADVLRLWVVNSDTNDDLRIGKEILKQQGEL----- 685

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
               Y R R+  R           D +        +E    E  ++  L E   +I  A 
Sbjct: 686 ----YRRLRNTLRWLLGA-----LDGYTEAEAVPYAELPELERWVLHRLTELGGLIARAV 736

Query: 514 IAQE-----P--YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
              E     P  +          +     +   R++  L     +N      R  L
Sbjct: 737 ETHEWVGVYPALHGFCT------TDLSAFYFDIRKD-ALYCDAPSNPTRRAARTVL 785


>gi|253680951|ref|ZP_04861754.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562800|gb|EES92246.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 646

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 137/426 (32%), Gaps = 87/426 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D +A     +GY+       ++ G +I  LA +           
Sbjct: 15  PSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEA----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  Y+  +   + D +  +++N   +K++    DY V+ + KI +     
Sbjct: 64  ------KGITPKEYVDEIVSGIKDLW--KVMNVKYDKFIRTTDDYHVETVQKIFKKLYDK 115

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G        ++    + Y ++      +     
Sbjct: 116 GDIYKGEYEGLYCTPCESFWTETQLVDGKCPDCGRAVEKTKEEAYFFKMSKYADRLIEYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   +  Q   R   + ++  RP             DL   +  +  G    FD  ++IY
Sbjct: 176 ETHSEFIQPESRKNEMLNNFLRP----------GLQDLCISRTSFNWGIPVSFDEKHVIY 225

Query: 355 VM---------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---- 395
           V                 +D   Y K   A    V +   + + +   ++ +  D     
Sbjct: 226 VWIDALTNYITALGYNQDND-ELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPK 284

Query: 396 ----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                        KMSK  G+ +    +V+  G+D+VR+ +L           +      
Sbjct: 285 QVFGHGWLLVDGGKMSKSKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGM-YTSETFI 343

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            K N            R+I             + +   VIP  +  D  + +LI    E 
Sbjct: 344 KKTNSDLANDLGNLVNRTIAM----------INKYFDGVIPAPTAKDDIDDELIKVALEI 393

Query: 506 PRVIEN 511
           P  +E 
Sbjct: 394 PERVER 399


>gi|160932720|ref|ZP_02080109.1| hypothetical protein CLOLEP_01561 [Clostridium leptum DSM 753]
 gi|156867794|gb|EDO61166.1| hypothetical protein CLOLEP_01561 [Clostridium leptum DSM 753]
          Length = 483

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 103/301 (34%), Gaps = 55/301 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+                  EY I  A +Q     L +    Q+ 
Sbjct: 10  APSPTGFMHVGNLRTALY-----------------EYLI--AKSQGGKFILRIEDTDQER 50

Query: 189 LYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           L +   ++       V LKH  G ++  +Y   + +  ++ + P  +    +        
Sbjct: 51  LVDGAVEVIYRTLDMVGLKHDEGPDVGGEYGPYVQSQRKDMYKPYAEQLVKEGKAYYCFC 110

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + L+  H        + R      ++ +D L  QG  Y      P   +T   D    
Sbjct: 111 TKERLDALHQEQGVGGGYDRHCRDLPQEEVDRLLAQGVPYVIRQKMPLEGSTTFQDAVYG 170

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK-- 365
           ++   +  +    D+ LLK+DG  TY               F N+I     DHS ++   
Sbjct: 171 EITVENKEL---EDQILLKADGYPTY--------------NFANVID----DHSMHITHV 209

Query: 366 -----------RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                      +   +  A   +     V L  ++    DG   K+SKR G       + 
Sbjct: 210 VRGCEYLSSAPKYNLLYEAFGWEVPTY-VHLPLIMGKNEDGSVSKLSKRHGATSFEDLMA 268

Query: 415 D 415
           D
Sbjct: 269 D 269


>gi|325977658|ref|YP_004287374.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177586|emb|CBZ47630.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 883

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPNDDRYKDLI 243


>gi|306830739|ref|ZP_07463903.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304427086|gb|EFM30194.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 883

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPNDDRYKDLI 243


>gi|288904741|ref|YP_003429962.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731466|emb|CBI13020.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 883

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPNDDRYKDLI 243


>gi|256384369|gb|ACU78939.1| glutamate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385201|gb|ACU79770.1| glutamate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455350|gb|ADH21585.1| glutamate--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 483

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 120/352 (34%), Gaps = 73/352 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A++         G  +  +      ++TR        +Q   L  
Sbjct: 8   APSPTGFLHIGNTRTALMNYLFAKHYNGSFIVRIEDT---DLTR-NVDGAIESQFENLNW 63

Query: 180 SVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYS 237
                    ++ ++S         G Y++    +   + + +L++  +        ++  
Sbjct: 64  L-------GIFPDESIFNVGDQKYGKYMQSQKFDRYKQLAEQLVDQNKAYRCFCTSEELE 116

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                +  +  +     Q  +F+++D         I+  ++N       Y      P++K
Sbjct: 117 KDYEEQTSKGIIATKYSQKCLFLTQDQ--------IQKNLENKKE----YSIRFKVPENK 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    D+ R  + F S  +GD     +LKS+G  TY   + A     Y+    +++   G
Sbjct: 165 TWTINDIVRGDVSFDSKDLGDF---VILKSNGVATY---NFAVVIDDYDMQITHVLR--G 216

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            +H     R   +  A +    +        + L  D    K+SKR+G+ +       + 
Sbjct: 217 EEHISNTPRQMMIYDAFNWNYPKFGH-----LTLIVDNTGKKLSKRSGNALFFIEQYKKQ 271

Query: 418 GS--------------------------DSVRFMMLWRKNSELLDFDFCKVK 443
           G                           + ++     R +     FD  K+K
Sbjct: 272 GYLSQAIFNYIALLGWSPPGEQEILSQNELIKIFDEKRFSKSPSTFDMVKMK 323


>gi|206900916|ref|YP_002250812.1| valyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740019|gb|ACI19077.1| valyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 881

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 62/231 (26%), Gaps = 33/231 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                   +    +  ++       +I     N TG +H+GH   A + D L       G
Sbjct: 15  EDKWYKYWLEKDYFHADVDKNKKPYSIVLPPPNITGSLHMGHALNATIQDILIRWRRMQG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +        + AG     +                               V +EL  K  
Sbjct: 75  FNALWIPGTDHAGIATQMV-------------------------------VERELL-KEG 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L  V  +  +     I + LK L +  D               +     
Sbjct: 103 KTRWDLGREKFLERVWQWK-EKYGNTIVEQLKRLGVSCDWKRFRFTMDEVYSRAVIKAFV 161

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            L ++GY+Y+G          +    D +            +  PL   DG
Sbjct: 162 ELYKKGYIYKGERIINWCPRCKTALSDLEIKYVEENSFLWHIKYPLHNEDG 212



 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 71/436 (16%), Positives = 143/436 (32%), Gaps = 87/436 (19%)

Query: 154 MAFSGYEVTREYYIND------AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           +   GY + +E YI+D       G  I  L    ++   + +     ++ E       +K
Sbjct: 327 LEKEGYLLKKEPYIHDLATCDRCGTPIEPLISKQWFMRMENIAKPAIEVVEKG----EVK 382

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V       Y           W+  +KD+ +   +            +   +  ED  H 
Sbjct: 383 FVPDRWKKVYFD---------WMYNIKDWCLSRQLWW--------GHRIPAWYCEDCGH- 424

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                    I+   +Q    E        +     D      L+    +G   D      
Sbjct: 425 ---------INVEEKQPEKCEKCGSKNLKQDEDVLDTWFSSALWPLGTLGWPED----TE 471

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           D +Y Y  + L+  +         MI +MG +  G +                   +   
Sbjct: 472 DLNYFYPTSVLSTARDIINLWVARMI-MMGLEFKGDIP---------------FYYVYVH 515

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
              L R+G   +MSK  G  +    ++++ G+D  RF  L  + +E+ D  F +   ++ 
Sbjct: 516 PTVLTREGK--RMSKSKGTGVDPLELINKYGADVTRFG-LAIQCTEMQDLRFHEENFENT 572

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           +N              I+  A+ +  +LDF+L    V   +     S+  ++  L +   
Sbjct: 573 KN----------FTNKIWNAARFVISNLDFNLNYNEVDLSKHSLSLSDKWILTRLQK--- 619

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLV 563
           VI   T   E ++ + Y+  +   ++  WS       E  + R     + +       L+
Sbjct: 620 VIREVTEHLENFRFSEYVKTI---YNFFWSEFCDWYIELSKPRLSSTEDPESK-----LI 671

Query: 564 HAV--ASIINSGLNII 577
             V    ++   + ++
Sbjct: 672 AQVILWRVLKESMQLL 687


>gi|22536625|ref|NP_687476.1| valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76797752|ref|ZP_00780019.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|81455031|sp|Q8E1B5|SYV_STRA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22533463|gb|AAM99348.1|AE014212_7 valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586900|gb|EAO63391.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 883

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +      +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEEGRYQTWLDQDVFKPSGDTEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDARYKDLI 243


>gi|306832917|ref|ZP_07466049.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424816|gb|EFM27950.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 883

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPNDDRYKDLI 243


>gi|16077160|ref|NP_387973.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307903|ref|ZP_03589750.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312224|ref|ZP_03594029.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317158|ref|ZP_03598452.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321421|ref|ZP_03602715.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135106|sp|P22250|SYE_BACSU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|143006|gb|AAA22495.1| transfer RNA-Gln synthetase [Bacillus subtilis]
 gi|289282|gb|AAA21796.1| glutamyl-tRNA synthetase [Bacillus subtilis]
 gi|467480|dbj|BAA05326.1| glutamyl-tRNA synthetase [Bacillus subtilis]
 gi|2632359|emb|CAB11868.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2653659|gb|AAC31971.1| glutamyl-tRNA synthetase [Bacillus subtilis]
          Length = 483

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 96/292 (32%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---NQGGKFIIRVEDTDKKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +I R 
Sbjct: 67  GIDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEKGLAYKCYCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +H     E+              +    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGKHRDLTQEEQ-------------EKFIAEGRKPSIRFRVPEGKVIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAIDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 226 IMIYQAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 272


>gi|159030421|emb|CAO91322.1| valS [Microcystis aeruginosa PCC 7806]
          Length = 906

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P            +   +  N    G    I     N TG +H+GH   + + DTL   
Sbjct: 10  DPKITETKWQQYWENQEIFTANPEKGGETYCIVIPPPNVTGSLHMGHAFESALIDTLVRY 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G                           +  L+   +D        +  + +  E 
Sbjct: 70  KRMTG---------------------------KNTLWLPGTDHASIAVQAILDRQLKAEK 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y      F E  W    K+ S   ++      L+ L +  D          G    +
Sbjct: 103 TDRYQLGREKFLERAWQ--WKEESGSTIVNQ----LRRLGVSVDWTRERFTMDEGLSHAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 157 RTAFIKLYEDGLIYRG 172



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 91/300 (30%), Gaps = 44/300 (14%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-----NLA 281
           E+W  + +D+ V+     I   L     Q   +    + +    +    ++       LA
Sbjct: 387 ERWTKVYRDWLVKLKDWCISRQLW-WGHQIPAWYIISETNNEITNHTPFVVAWDETSALA 445

Query: 282 RQGYVY-EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           +    Y E I+                 L   STM   +    L            D  Y
Sbjct: 446 KAKQEYGEDIIIQQDPDVLDTWFSSG--LWPFSTMGWPEKTLDL------------DTYY 491

Query: 341 FKCKYERGFDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                  GFD +I+   +     +GY  R       +  K   I+        L RD   
Sbjct: 492 PTTTLVTGFD-IIFFWVARMTMMAGYFTRQ------MPFKDVYIH-------GLVRDENG 537

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK A + I    ++D+ G+D++R+ ++        D      ++  +   V   +  
Sbjct: 538 KKMSKSANNGIDPLILIDKYGTDALRYTLIREVAGAGQDISLQYNRKTDESESVEAARNF 597

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             +  +  R           +     V+      D         L+ Y + ++      E
Sbjct: 598 ANKIWNASRFVMMNLEGKTPEELGEPVLENLELADRW------ILSRYHQTVQKTRDYLE 651


>gi|296131644|ref|YP_003638891.1| methionyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030222|gb|ADG80990.1| methionyl-tRNA synthetase [Thermincola potens JR]
          Length = 647

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 68/419 (16%), Positives = 140/419 (33%), Gaps = 70/419 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 14  PSDNLHIGHAYTTVAADTIARYKRMTGYDVRFLTGSDEHGQKIE--------RTAKARGV 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
              D  +    G           D +  + +   E +   +V+     +     I + + 
Sbjct: 66  EPIDYVDRIVAGFKNL---WRHLDVHYDDFIRTTEPRHKEVVQKIFTRLYEQGDIYKSEY 122

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           + L     + F +E     G+       ++ +  + Y +       +     + + D  Q
Sbjct: 123 EGLYCTPCETFWTERQAEEGNCPDCGRPVERVREESYFFRMSKYADRLLRYIEENPDFIQ 182

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM------ 356
            + R   + + + + L            DL   +  ++ G    FD  +++YV       
Sbjct: 183 PVSRRNEMVNFIKQGL-----------EDLCVSRTTFDWGIKVPFDPKHVVYVWVDALTN 231

Query: 357 -------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                  G+++   Y K   A    V +   + + ++  ++ +                 
Sbjct: 232 YISALGYGTENDELYKKYWPADVHLVGKDIVRFHTIIWPILLMAIGEPLPKKVMGHGWLL 291

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
               KMSK  G+ I    ++D+ G D++R+ +L         +   +   Q + N     
Sbjct: 292 LEGGKMSKSKGNVIDPLVLIDKYGVDAIRYYLLRELPFGSDGYYAEEALIQ-RINSDLAN 350

Query: 455 QYAYARCRSIFR---------QAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLA 503
                  R+I           QA     ++D DL    ++  E   +  E L+L   LA
Sbjct: 351 DLGNLISRTIAMVEKYFNGMVQAPTEKEEIDEDLRQLAMVTVEDYRNQMEKLELSNALA 409


>gi|229194478|ref|ZP_04321281.1| Glutamyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228588944|gb|EEK46959.1| Glutamyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 491

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 94/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        ++    +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVEEFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|157103547|ref|XP_001648027.1| valyl-tRNA synthetase [Aedes aegypti]
 gi|108869396|gb|EAT33621.1| valyl-tRNA synthetase [Aedes aegypti]
          Length = 980

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 35/216 (16%)

Query: 93  LSPSYLRKILSS---IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L  +Y    + +     +           +  K ++     N TG +H+GH     V D 
Sbjct: 39  LDSAYQPARVEAANRRNIDARTAPVADDARKKKFSLLLPPPNVTGELHLGHALTCAVQDV 98

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G+        + AG     +                               V
Sbjct: 99  LVRWKEKEGFAPVWIPGTDHAGIATQVV-------------------------------V 127

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K+L  +      +   E++L  +  +  +   + I +DLK +    D            
Sbjct: 128 EKKLQKERGLGRHDLGREEFLREIWKWKAEKARR-IEEDLKRMGCWMDWNREYFTMDERQ 186

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              +++    L  +G +Y        S + +    D
Sbjct: 187 KEAVKEAFVRLFEKGMIYRDKSLVNWSCSLESAISD 222


>gi|325660697|ref|ZP_08149326.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085577|ref|ZP_08334661.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325473004|gb|EGC76213.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330407464|gb|EGG86966.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 882

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 51/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIEPKLYEKWCENKYFHAEVDRSKKPFTTVMPPPNITGKLHMGHAFDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A++   +  + L     D  E             
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAIATEVKVTEQLKAEGIDKKELGR--EKFLERTW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  D+Y+                          I   LK L +  D          G   
Sbjct: 119 QWKDEYA------------------------GTIEGQLKKLGVSCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEEGYIYKG 172


>gi|294793443|ref|ZP_06758580.1| methionine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455013|gb|EFG23385.1| methionine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 648

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 116/338 (34%), Gaps = 64/338 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V      ++ G +I         R  +A   
Sbjct: 17  PSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAEAQGI 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +       G         ++   + + +   +E+   +V+    +A  K  I + + 
Sbjct: 69  TPLEYTTNIVNGFKALWEKMHIS---NDDFIRTTDERHEKVVQALFTKAYEKGDIYKAEY 125

Query: 250 KALNIQHDIFISEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +      D     +   +  P+         ++ +  + Y ++      +     + + D
Sbjct: 126 EGWYCTPDETFWTE--QKLGPNHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPD 183

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--- 356
             Q   R   +   V + L            DLA  +  ++ G    FD  +++YV    
Sbjct: 184 FIQPESRRNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDA 232

Query: 357 -----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---------- 395
                        D   Y K   A    V ++  + + ++  ++ +  +           
Sbjct: 233 LVNYISALSPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHG 292

Query: 396 ----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 293 WMIVDGTKMSKSLGNVIDPIPLIDTYGADSLRYYLLSE 330


>gi|147676628|ref|YP_001210843.1| glutamyl- and glutaminyl-tRNA synthetases [Pelotomaculum
           thermopropionicum SI]
 gi|238686638|sp|A5D5L8|SYE_PELTS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|146272725|dbj|BAF58474.1| glutamyl- and glutaminyl-tRNA synthetases [Pelotomaculum
           thermopropionicum SI]
          Length = 480

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 90/283 (31%), Gaps = 40/283 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A    + G  + R   I D    +   +         A
Sbjct: 7   APSPTGPLHIGGARSALFNWLFAR--RYGGKFIVR---IED--TDLERSSRQSEENILAA 59

Query: 189 LYNNDSDLPEGYYPG----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     D  EG   G     Y +     L   Y+  LL           ++        +
Sbjct: 60  LRWLGLDWDEGVDAGGPCEPYRQTERLHLYRHYAEILLQSGAAYRCYCTEEELAAEREAL 119

Query: 245 IR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +   +  + L    D+   E                 L  +G         P+ +  Q  
Sbjct: 120 MEKGETPRYLGRCRDLTPQER--------------ARLEAEGRKAAVRFRVPRDRVIQVK 165

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F    +GD +   ++KSDG  TY   + A     +     ++I     +H  
Sbjct: 166 DLVRGDVSFECNGMGDFI---IMKSDGIPTY---NFAVVVDDHTMAISHVIR--AEEHLP 217

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              R   +  A+     +        V L       KMSKR G
Sbjct: 218 NTPRQILLYQALGWDTPEFAH-----VSLILGKDRSKMSKRHG 255


>gi|293367905|ref|ZP_06614543.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291317934|gb|EFE58342.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329738050|gb|EGG74271.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 466

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 137/421 (32%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +     + +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYDDVGALNVKKATSNPRVMHHMGEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYH----ELGSTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EV  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++       +     E      Q+   L ++  V+++         +  + YDLA + + 
Sbjct: 325 IEE---REQIASDLEEQSEYIQQIDKILNQFETVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|229009597|ref|ZP_04166823.1| Glutamyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229131095|ref|ZP_04260007.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229165076|ref|ZP_04292871.1| Glutamyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228618339|gb|EEK75369.1| Glutamyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228652308|gb|EEL08233.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228751619|gb|EEM01419.1| Glutamyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 491

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 97/299 (32%), Gaps = 44/299 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +V R    N AG           
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHQDGKFIIRIEDTDVKR----NVAG------GEESQ 65

Query: 183 WRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            +Y + L  + D  +  G   G Y +    ++  K   +LL           +D + +  
Sbjct: 66  LKYLKWLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYKDLLE----------RDLAYKCY 115

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M     + +           E   + G+      + I     +G +       P      
Sbjct: 116 MTEEELEAEREGQIAR---GETPRYAGNHRDLTEEQIKGFEAEGRIPSIRFRVPADSDYT 172

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH
Sbjct: 173 FKDLVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDH 224

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +   +  A      +   +      L  +    K+SKR    I       E+G 
Sbjct: 225 ISNTPKQMMIYEAFGWDIPKFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|153956357|ref|YP_001397122.1| methionyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856672|ref|YP_002473794.1| hypothetical protein CKR_3329 [Clostridium kluyveri NBRC 12016]
 gi|146349215|gb|EDK35751.1| MetS [Clostridium kluyveri DSM 555]
 gi|219570396|dbj|BAH08380.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 644

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 109/339 (32%), Gaps = 60/339 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + SAN    +H+G+    V  D LA     +GY+V      ++ G +I  LA        
Sbjct: 14  YPSAN----LHIGNTYTTVAADALARFKRITGYDVMLLTGTDEHGQKIQRLA-------- 61

Query: 187 QALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +A      +  +    G+  L  +     DK+      +       I K    Q    I 
Sbjct: 62  EAKGVPPKEYVDEIVAGIKDLWKIMNINYDKFIRTTEKYHIAAVQKIFKKLYDQG--DIY 119

Query: 246 RDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           + + +       + F +E     G        ++    + Y ++     P      +   
Sbjct: 120 KGNYEGWYCTPCESFWTETQLIDGKCPDCGRTVEKAKEEAYFFKMSKYAPALIKHIETHP 179

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM-- 356
           D  Q   R   + ++  +P             DL   +  ++ G    FD  ++IYV   
Sbjct: 180 DFIQPESRKNEMLNNFLKP----------GLQDLCVSRTSFDWGIPVTFDNKHVIYVWID 229

Query: 357 ------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM-------- 396
                         D   Y K   A    V +   + + +   ++ +             
Sbjct: 230 ALANYITALGYGSEDDKLYKKYWPANVHLVGKDILRFHTIYWPIMLMALGEEIPEKVFGH 289

Query: 397 ------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                   KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 290 GWLLVDGGKMSKSKGNVVDPVVLVNHFGTDAVRYYLLRE 328


>gi|227501185|ref|ZP_03931234.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216586|gb|EEI81990.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 645

 Score = 53.8 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 69/418 (16%), Positives = 136/418 (32%), Gaps = 59/418 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+G+   +V+ D L       GY+       ++ G +I   A        QA  +
Sbjct: 16  PNSNLHIGNTYTSVIADVLKRYKNLLGYDTFLTTGTDEHGQKIMKSAQDAGV-NPQAFVD 74

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +      +  + +        D++        EE    I     +     I + + K 
Sbjct: 75  KIASETIELWKKLEID------YDRFIRSTEKQHEEDVKNIF--TKLYEQGDIYKGEYKG 126

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        +D    + Y +       + K   K   +  +  
Sbjct: 127 YYCTPCETFWTEAQLEDGKCPDCGRDVDYQEEETYFFRLSKYTDRLKELFKDHPEFLEPA 186

Query: 311 FRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVM------- 356
           FR   M+ + +D+ L           +DL+  +  ++ G D      +++YV        
Sbjct: 187 FRQKEMLNNFIDKGL-----------SDLSVTRNSFDWGVDVPFDNEHVVYVWIDALSCY 235

Query: 357 ------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------------M 396
                 G D   + K   A    + +   + + ++   + +  D                
Sbjct: 236 LSAIGFGDDKEKFEKYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQ 455
             KMSK  G+ +    +VD  G D+++F ML   N     +F   K  E+   + V  + 
Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSAKKFMERYNSDLVNDLG 355

Query: 456 YAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
              +R  S+  +     +      D F   +I   SE  +   +L+     +   IE 
Sbjct: 356 NLVSRTTSMIDKYNGGVVRKGTVSDSFDDELIALSSETYSKFNKLMNE-FNFNAAIEA 412


>gi|328551793|gb|AEB22285.1| glutamyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328910053|gb|AEB61649.1| glutamyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 483

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 98/292 (33%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---SQGGKFIIRIEDTDKKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +I R 
Sbjct: 67  GMDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEKGLAYKCFCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +H     E+              +    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGKHRNLTQEEQ-------------EQFLAEGRQPSIRFRVPEGKIIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAIDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A         + +   + L  +    K+SKR    I      +E+G 
Sbjct: 226 IMIFQAFGWD-----IPVFGHMTLIVNESRKKLSKRDESIIQFIEQYEELGY 272


>gi|322517283|ref|ZP_08070160.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124113|gb|EFX95652.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 901

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 28  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 87

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 88  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 117 -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGLSVDYSRERFTLDEGLSKAV 174

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 175 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 234

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 235 ATTRPETMFGDTAVAVNPNDDRYKDLI 261


>gi|322372403|ref|ZP_08046939.1| valine--tRNA ligase [Streptococcus sp. C150]
 gi|321277445|gb|EFX54514.1| valine--tRNA ligase [Streptococcus sp. C150]
          Length = 883

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AESGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|269115214|ref|YP_003302977.1| glutamyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322839|emb|CAX37574.1| Glutamyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 465

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 41/304 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR-------EYYINDAGAQINTLALSV 181
           + +PTG +H+G  R A+     A    F+G  V R          +    +Q+N LA   
Sbjct: 9   APSPTGYLHIGGARTALFNYLFAK--HFNGTFVFRLEDTDVARNVVGGEESQLNNLAWL- 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                  +  ++S L      G Y +     +  K   EL+           K Y  +  
Sbjct: 66  ------GIIPDESPLKPNSKYGAYRQSEKLPIYQKLVEELIQNG-----HAYKAYDSEEE 114

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +     +   +           +  +   I +       +   Y   L  P +K    
Sbjct: 115 LAMQHKQSEEAGVA-------SFRYNPNWLQISNEEKQRREEAKEYSIRLKLPANKDYAW 167

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R ++   S  +GD     ++KSDG  TY   + A     ++    +++   G +H 
Sbjct: 168 NDLVRGKISVNSDDIGDF---VIMKSDGYPTY---NFAVVVDDHQMEISHVLR--GEEHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               +  A+  A   +       L   + +  +    K+SKR              G  +
Sbjct: 220 TNTPKQLAIYDAFGWEPP-----LFGHLTIITNMEGKKLSKRDKTLKQFIEDYKNEGYPA 274

Query: 422 VRFM 425
              M
Sbjct: 275 AAIM 278


>gi|77414609|ref|ZP_00790750.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159348|gb|EAO70518.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 883

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDTEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYLLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|228478388|ref|ZP_04062996.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250067|gb|EEK09337.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 883

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|296333089|ref|ZP_06875543.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672791|ref|YP_003864462.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149705|gb|EFG90600.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411034|gb|ADM36152.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 483

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 96/292 (32%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---NQGGKFIIRVEDTDKKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +I R 
Sbjct: 67  GIDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEKGLAYKCYCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +H     E+              +    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGKHRNLTQEEQ-------------EKFIAEGRKPSIRFRVPEGKIIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAIDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 226 IMIFQAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 272


>gi|168209762|ref|ZP_02635387.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168217641|ref|ZP_02643266.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|170712109|gb|EDT24291.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|182380303|gb|EDT77782.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 645

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 116/343 (33%), Gaps = 74/343 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D +A     +G+EV      ++ G +I  +A             
Sbjct: 15  PSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +     
Sbjct: 64  ------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQ 115

Query: 252 LNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I  D +             E     G+       ++    + Y ++      +     
Sbjct: 116 GDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADRLIQYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   D  Q   R   + ++  RP             DL   +  +  G    FD  ++IY
Sbjct: 176 EEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDEKHVIY 225

Query: 355 VM-GS-------------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM---- 396
           V   +             D   Y K   A    + +   + + +   ++ +         
Sbjct: 226 VWIDALSNYITALGYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQ 285

Query: 397 ----------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 286 VFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|300811354|ref|ZP_07091851.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497718|gb|EFK32743.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 879

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPQEVEAGRYQEWLDEDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++       II+   + L +  D         +G    +
Sbjct: 98  -REQGVSRYDLGREKFMEKVWEWK-DEYANIIKSQWQKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RRVFVQLYNEGLIYRGEYIINWDPKLRTALSD 187



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +            E+     VL      L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFT---------GERPFDNVVLHG----LIRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ I    ++D+ G+D++R+ +L      +   F + K+
Sbjct: 526 LGNGIDPMDIIDKYGADALRWFLLNGTAPGQDTRFSYTKM 565


>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 924

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 128/389 (32%), Gaps = 93/389 (23%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK  +ELL    E KW+P   +  +  M++  R D      +A  +   +F  E     G
Sbjct: 415 DKIRNELLQAIKETKWIPEWGEIRIHNMVRD-RGDWCISRQRAWGVPIPVFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         + D   + F S
Sbjct: 470 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++ D        DL        R  D  +Y+ GSD   G+     + A 
Sbjct: 530 ---GSSHQAVLVERD--------DLM-------RPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V+++ G+D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQFGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ S+          Y + R+ FR       D D +     +     E  
Sbjct: 627 ADVRISDHILKQVSE---------VYRKIRNTFRFMLGNLFDFDPNQNAVPI----GELG 673

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHWSHGRE 541
             +  ++  L +    ++ A  +          YD A+V+H             +     
Sbjct: 674 EVDRYMLAKLNKLIAKVKKAYDS----------YDFAAVYHEMNHFCTVELSAFY----- 718

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASII 570
               + +       +  R     AV +++
Sbjct: 719 LDMAKDILYIEAADSRAR----RAVQTVL 743


>gi|110801166|ref|YP_697211.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675813|gb|ABG84800.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 645

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 116/343 (33%), Gaps = 74/343 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D +A     +G+EV      ++ G +I  +A             
Sbjct: 15  PSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +     
Sbjct: 64  ------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQ 115

Query: 252 LNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I  D +             E     G+       ++    + Y ++      +     
Sbjct: 116 GDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADRLIQYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   D  Q   R   + ++  RP             DL   +  +  G    FD  ++IY
Sbjct: 176 EEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDEKHVIY 225

Query: 355 VM-GS-------------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM---- 396
           V   +             D   Y K   A    + +   + + +   ++ +         
Sbjct: 226 VWIDALSNYITALGYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQ 285

Query: 397 ----------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 286 VFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|327403532|ref|YP_004344370.1| glutamyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319040|gb|AEA43532.1| glutamyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 503

 Score = 53.8 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 132/398 (33%), Gaps = 38/398 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-GAQINTLALSVFWRYQQ 187
           + +PTGP+H+G  R A+     A     +G  + R   I D    +    A        +
Sbjct: 11  APSPTGPLHMGGVRTALYNYLFAK--HNNGTFIIR---IEDTDQTRFVPGAQEYIMDSLK 65

Query: 188 ALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                  + P  G   G Y++   +EL   Y+  L++            +     ++ +R
Sbjct: 66  WCGIIPDEGPGIGGNYGPYVQSERQELYKPYAIGLVDND-----KAYYAFDTPEELEAVR 120

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  K + + +  + S    +  +   +  D +      G  +      P++   +  D+ 
Sbjct: 121 EQAKLMGMPNWQYNSVTRTNLKNSLTLPADEVKRRLDAGEPFVIRFKMPRNHDVRFEDIV 180

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R  ++  +  +    D+ L KSDG  TY    LA     +     ++I   G +      
Sbjct: 181 RGWVVVNTNNLD---DKVLFKSDGMPTYH---LANIVDDHLMKISHVIR--GEEWLPSAP 232

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-VDEVGSDSVRF 424
               +  A          L   L  L R     K+SKR GD +       + + +D  ++
Sbjct: 233 MHVLLYQAFGWDAP----LFAHLPLLLRPDGNGKLSKRDGDRLGFPVFPANWIAADGEKY 288

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA----RCRSIFRQAKDIFPDLDFDLF 480
                       F    +      NP    +        +  S+ R  K       FD  
Sbjct: 289 SGYRENGYFPGSF--INMLAFLGWNPGTTQEIFSMDELIQAFSLERVGK---AGAKFDPE 343

Query: 481 PRNVIPQESEFDTSELQLIVHL-AEYPRVIENATIAQE 517
                 Q+   +TSE +L   L  E+   + ++    E
Sbjct: 344 KTKWFQQQYLKNTSEKELAQLLKNEFN--LTDSEERLE 379


>gi|77409780|ref|ZP_00786432.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77171610|gb|EAO74827.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 655

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 495

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 75/425 (17%), Positives = 141/425 (33%), Gaps = 63/425 (14%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  K +I      P  P H+GH   A+  D +   +++ G+EVT    I D   +I 
Sbjct: 18  EPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGFEVTFVRNITDVEDKI- 76

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLP 231
                 F R  +               G     + +  A +Y++++  F    P+ +   
Sbjct: 77  ------FARAAE--------------NGEEPLALAERFAAEYNADMARFGVLAPDIEPRV 116

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
                 +  +++ I D+  A  +  D++ S + F           +D+L        G  
Sbjct: 117 STHIEDIVGLIQGIIDNGAAYPVDGDVYFSVEAFKPYG-QLSGQSLDDLRA------GAR 169

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
               ++     D     L   +       D P  +  G   +     A       + FD 
Sbjct: 170 VEVDARKKAPADF---ALWKSAKPGELAWDAPWGR--GRPGWHIECSAMSLRHLGQTFD- 223

Query: 352 MIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            I+  G D     H   + + +A          +       +   + +    KMSK  G+
Sbjct: 224 -IHGGGKDLVFPHHENEIAQSQAA-------HGEDTFARYWMHNGFLNFSGEKMSKSLGN 275

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV----KEQSKENPVFYVQYAYARCR 462
               R + D VG +++RF  +       ++F+  +V      +  E     + Y Y+  R
Sbjct: 276 VFGCRQIADAVGPEALRFFSVSHHYRSPVNFEVDEVDGVTVFRDLEVADRRLDYFYSTLR 335

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            +     D F     D     V+P+  +   +  +      ++   I  A    E  KLA
Sbjct: 336 RL-----DDFLATGKDPGEGEVVPEADKLVPAARE--ALADDFNTPIVIAA-LGEAAKLA 387

Query: 523 FYLYD 527
             L D
Sbjct: 388 NKLLD 392


>gi|256847984|ref|ZP_05553428.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715044|gb|EEU30021.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 887

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 102/358 (28%), Gaps = 66/358 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K   +       +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 13  DPTAVEKGRYAWWQDHGFFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+E 
Sbjct: 73  KRMQGYDVL-------WLPGMDHAGIATQAKVEARLRK----------QGISRYDLGRE- 114

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ +E                II      + I  D          G    +
Sbjct: 115 --KFVQQVWDWKDE-------------YADIIHQQWAKMGISVDYDRERFTLDEGLNKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R +  +L  +G +Y G          +    D +  +      G         +DG+ T+
Sbjct: 160 RKVFVDLYNKGLIYRGTYIINWDPQARTALSDIE--VIHKDDKGAFYHVKYPFTDGT-TF 216

Query: 334 FAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D +     + E  F                          ++   +N        L 
Sbjct: 217 NGKDYIEIATTRPETMF-------------------------GDEAVAVNPHDERYKELV 251

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              + + +  R  + I   +V  + G+  V+         +  DF   K     + N 
Sbjct: 252 GKHVRVPLVDREIEIIADDYVTPDFGTGMVKI----TPAHDPNDFKVGKRHNLPELNT 305



 Score = 38.4 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 38/240 (15%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            + G +Y G +  PK     + D D     F S +             G     A D   
Sbjct: 429 KQTGEMYVG-MEAPKDAENWEQDHDVLDTWFSSALWPFSTM-------GWPDTDAPD--- 477

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPI 398
               Y+R F     V G D   +      +  ++    K    NVLL  L+   RD    
Sbjct: 478 ----YKRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTGKAPFKNVLLHGLI---RDEQGR 529

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ I    V+ + G D++R+ ++      + + F + K+              A
Sbjct: 530 KMSKSLGNGIDPMDVIAKYGVDALRWFLVTGSTPGQDIRFSYKKMDA------------A 577

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +     I+  ++ +  +LD  +     +P +S++D ++  +   LA+    ++      E
Sbjct: 578 WNFINKIWNASRYVIMNLD-GMEHAPQLPDKSKWDLADRWI---LAKLNATVQQVNAQFE 633


>gi|28377354|ref|NP_784246.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254555549|ref|YP_003061966.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|308179569|ref|YP_003923697.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258344|sp|Q88Z97|SYM_LACPL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28270186|emb|CAD63085.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044476|gb|ACT61269.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|308045060|gb|ADN97603.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 683

 Score = 53.4 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 118/352 (33%), Gaps = 83/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  DTLA      GY+V                   +    +  L  
Sbjct: 17  PSGKLHIGNSYTTIACDTLARYKRAMGYDVY-----------------FLTGTDEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +        P  Y+  + K++ D +  +LL    +K++    DY  +A+ +I    LK 
Sbjct: 60  EEKAEKLNTDPKSYVDGMAKQIKDLW--QLLEISNDKFIRTTDDYHERAVQEIFDRLLKN 117

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDI------------------IDNLARQGYVYE-- 288
            +I   +++ + S DD      + + ++                  ++ +  Q Y ++  
Sbjct: 118 GDIYLGEYEGWYSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMS 177

Query: 289 ------------------------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                                    ++        +   + R    +   +  D      
Sbjct: 178 KYADWLLDYYQSHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVY 237

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSE 376
           +  D    Y  A L Y     E  F+      + ++G +    H+ Y      +  A+  
Sbjct: 238 VWIDALTNYITA-LGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIY---WPIILHALGL 293

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              +   +      L +DG   KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 294 PLPKK--VFGHGWLLMKDG---KMSKSKGNVIYPETLVERYGLDALRYYLVK 340


>gi|303240982|ref|ZP_07327492.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591407|gb|EFL61145.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 467

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 113/334 (33%), Gaps = 60/334 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+G+ R  ++ DT+   + + GY+V                      ++ Q
Sbjct: 27  CGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYDV----------------------KFVQ 64

Query: 188 ALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKII 245
              + +D  +      G+ +K +      +Y  +      +E  +      ++ A++ +I
Sbjct: 65  NFTDIDDKMIKRANEEGITVKDLADRFIKEYFIDAKGLGIDEATVHPKATENIDAIIDLI 124

Query: 246 RDDLK---ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +   +   A N+  D++ S               I      G +    L      ++   
Sbjct: 125 KKLEENGFAYNVNGDVYFS---------------IGKFKEYGKLSHHSLEDLAIGSSVNV 169

Query: 303 DMDRKQ----LLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           D  ++      ++++   G+   D P  K    +    + +A    KY       I +  
Sbjct: 170 DERKQNPMDFAVWKAQKPGEPAWDSPWGKGRPGWHIECSAMA---NKY---LGETIDIHS 223

Query: 358 SDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                     E   A + A S K      +    + +  +    KMSK AG+F T+R +V
Sbjct: 224 GGQDLIFPHHENEIAQSEAASGKPFAKYWMHNGFINVNNE----KMSKSAGNFFTVRDIV 279

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           ++   + +RF ML       ++F    +++    
Sbjct: 280 EKFDYEVIRFFMLSAHYRSPINFSADLLEQAQNG 313


>gi|321313762|ref|YP_004206049.1| glutamyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291482464|dbj|BAI83539.1| glutamyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320020036|gb|ADV95022.1| glutamyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 483

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 96/292 (32%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---NQGGKFIIRVEDTDKKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +I R 
Sbjct: 67  GIDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEKGLAYKCYCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +H     E+              +    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGKHRDLTQEEQ-------------EKFIAEGRKPSIRFRVPEGKIIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAIDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 226 IMIYQAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 272


>gi|160933116|ref|ZP_02080505.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
 gi|156868190|gb|EDO61562.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
          Length = 931

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 106/314 (33%), Gaps = 29/314 (9%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRG 268
           + D     +    + +W+P   +  + +M++  RD      +   +   IF  ++     
Sbjct: 426 VEDFKEDAVKAIQDVQWIPAWGEDRITSMVRDRRDWCISRQRKWGVPIPIFFCKECGEPL 485

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                   +  L R+    +G     +  T        K     ++    + D   +  D
Sbjct: 486 IDKEAMLAVSRLFRE----KGSDAWYELNTEDILPAGTKCKKCGASSFDKEKDIMDVWFD 541

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCE 387
              T+     A    +    F   +Y+ G+D   G+ +     + A         V+   
Sbjct: 542 SGSTHA----AVLSKRPYLKFPADLYLEGADQYRGWFQSSLLTSVATKGTAPYKAVVTHG 597

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    DG   KMSK  G+ I  + +VD+ G+D +R  +        +      +K+ S+
Sbjct: 598 WVV---DGEGRKMSKSLGNGIEPQEIVDQYGADILRLWVASSDYHADIRISKDILKQLSE 654

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                    AY + R+  R       D + D    + +P +      +  L   L E  +
Sbjct: 655 ---------AYRKIRNTARYILGNLYDFNPD---TDRVPLDQLLPIDQWAL-KKLDELNQ 701

Query: 508 VIENATIAQEPYKL 521
            +     A E +++
Sbjct: 702 KVREGYDAFEFHQV 715


>gi|25028838|ref|NP_738892.1| valyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494124|dbj|BAC19092.1| putative valyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 939

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 71/241 (29%), Gaps = 41/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +   +    +I     N TG +H+GH     + D LA  
Sbjct: 61  DPKAVEADLYQGWVDAGYFTADPASEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARR 120

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   + ++ L   +      Y    +++ V  E 
Sbjct: 121 KRMQGFEVL-------WLPGMDHAGIATQTKVEEMLKETEGKSRYDYSREEFIEKV-WEW 172

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                           I + ++A+    D          G    +
Sbjct: 173 KKEYG------------------------GKIGEQMRAIGDSVDWSRERFTLDEGLSRAV 208

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L   G +Y+       S   +           D++ + +  R   + DD    +
Sbjct: 209 QTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHVV 268

Query: 325 L 325
           +
Sbjct: 269 V 269


>gi|290579895|ref|YP_003484287.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996794|dbj|BAH87395.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 882

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKTPPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I++    + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L ++G++Y G          +    D
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSD 188


>gi|77414814|ref|ZP_00790933.1| glutamyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159130|gb|EAO70322.1| glutamyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 478

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 58  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 101

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 102 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREASGIIPTVRLAVNESGI 159

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 160 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 213 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|312864262|ref|ZP_07724496.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100263|gb|EFQ58472.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 883

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDDSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|300767096|ref|ZP_07077009.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300495634|gb|EFK30789.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 689

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 118/352 (33%), Gaps = 83/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  DTLA      GY+V                   +    +  L  
Sbjct: 23  PSGKLHIGNSYTTIACDTLARYKRAMGYDVY-----------------FLTGTDEHGLKI 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +        P  Y+  + K++ D +  +LL    +K++    DY  +A+ +I    LK 
Sbjct: 66  EEKAEKLNTDPKSYVDGMAKQIKDLW--QLLEISNDKFIRTTDDYHERAVQEIFDRLLKN 123

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDI------------------IDNLARQGYVYE-- 288
            +I   +++ + S DD      + + ++                  ++ +  Q Y ++  
Sbjct: 124 GDIYLGEYEGWYSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMS 183

Query: 289 ------------------------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                                    ++        +   + R    +   +  D      
Sbjct: 184 KYADWLLDYYQSHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVY 243

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSE 376
           +  D    Y  A L Y     E  F+      + ++G +    H+ Y      +  A+  
Sbjct: 244 VWIDALTNYITA-LGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIY---WPIILHALGL 299

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              +   +      L +DG   KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 300 PLPKK--VFGHGWLLMKDG---KMSKSKGNVIYPETLVERYGLDALRYYLVK 346


>gi|325125475|gb|ADY84805.1| Valine-tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 879

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPQEVEAGRYQEWLDEDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++       II+   + L +  D         +G    +
Sbjct: 98  -REQGVSRYDLGREKFVEKVWEWK-DEYANIIKSQWQKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RRVFVQLYNEGLIYRGEYIINWDPKLRTALSD 187



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +            E+     VL      L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFT---------GERPFDNVVLHG----LIRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ I    V+D+ G+D++R+ +L      +   F + K+
Sbjct: 526 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKM 565


>gi|322513322|ref|ZP_08066443.1| valine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120921|gb|EFX92773.1| valine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 954

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSGNENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|227486182|ref|ZP_03916498.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235813|gb|EEI85828.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 650

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 132/395 (33%), Gaps = 43/395 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+G+   +++ D L       GYE       ++ G +I   +     +  Q   +
Sbjct: 16  PNSNLHIGNTYTSIIADVLKRYKTLLGYEAYLVTGTDEHGQKI-MESAHAHGKEPQEFVD 74

Query: 192 NDSDL------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ------ 239
             +                +++  GK+             E+  +   +           
Sbjct: 75  KIAAETIKLWEKLDINYDTFIRSTGKQHEKDVVDIFNKLYEQGDIYKGEYKGYYCTPCET 134

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-------EGILP 292
              +   +D K  +   D+   E++ +    S   D +  L +    +       + +L 
Sbjct: 135 FWTESQLEDGKCPDCGRDVNYQEEETYFFRLSKYADKLKELFKDHPEFLEPAFRQKEMLN 194

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFD 350
              +K  +   + R    +   +  D+     +  D    Y +A + Y   K K+ER + 
Sbjct: 195 NFINKGLEDLSVTRTSFDWGVDVPFDNKHVVYVWIDALSCYLSA-IGYGDDKEKFERYWP 253

Query: 351 NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++++G D    + R   +      ++        +      L+ +    KMSK  G+ 
Sbjct: 254 ASVHLIGKD----IVRFHTIIWPALLMALDLPLPEKVFAHGWILFEN---DKMSKSKGNI 306

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           +    +V+  G+D++++ ML   N     DF   K  ++   + V  +    +R  S+  
Sbjct: 307 MYPEPLVELYGNDALKYFMLREFNFGSDGDFSSKKFMDRYNSDLVNDLGNLVSRTTSMIS 366

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +      +            +E +FD   + L   
Sbjct: 367 KYNGGVIEKG---------TEEGKFDDELIALAKE 392


>gi|104773811|ref|YP_618791.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|103422892|emb|CAI97554.1| Valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 879

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPQEVEAGRYQEWLDEDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L                        
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARL------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++       II+   + L +  D         +G    +
Sbjct: 98  -REQGVSRYDLGREKFVEKVWEWK-DEYANIIKSQWQKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RRVFVQLYNEGLIYRGEYIINWDPKLRTALSD 187



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +          + E+     VL      L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHF---------IGERPFDNVVLHG----LIRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ I    V+D+ G+D++R+ +L      +   F + K+
Sbjct: 526 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKM 565


>gi|25010187|ref|NP_734582.1| glutamyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|30173157|sp|Q8E7P2|SYE_STRA3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|23094538|emb|CAD45757.1| glutamyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 484

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 108 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREASGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|163938095|ref|YP_001642979.1| glutamyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229470605|sp|A9VNA0|SYE_BACWK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|163860292|gb|ABY41351.1| glutamyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 485

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 97/299 (32%), Gaps = 44/299 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +V R    N AG           
Sbjct: 10  APSPTGHLHIGNARTALFNYLFARHQDGKFIIRIEDTDVKR----NVAG------GEESQ 59

Query: 183 WRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            +Y + L  + D  +  G   G Y +    ++  K   +LL           +D + +  
Sbjct: 60  LKYLKWLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYKDLLE----------RDLAYKCY 109

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M     + +           E   + G+      + I     +G +       P      
Sbjct: 110 MTEEELEAEREGQIAR---GETPRYAGNHRDLTEEQIKGFEAEGRIPSIRFRVPADSDYT 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH
Sbjct: 167 FKDLVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDH 218

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +   +  A      +   +      L  +    K+SKR    I       E+G 
Sbjct: 219 ISNTPKQMMIYEAFGWDIPKFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 272


>gi|283851277|ref|ZP_06368559.1| glutamyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283573227|gb|EFC21205.1| glutamyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 464

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 98/294 (33%), Gaps = 55/294 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTL 177
            +   + +PTG +H+G  R A+    LA       L+     ++ R           +  
Sbjct: 4   IVTRFAPSPTGYLHIGGARTAIFNWLLARHHGGKFLLRIEDTDLVRSN--------ADMT 55

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +       L+++     +     +Y +H+ K LA  ++      P+E          
Sbjct: 56  KSILDAMEWLGLHHDGELTYQSQRFDIYNEHIDKLLATGHAYWCSCTPDE---------- 105

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V+AM +  R     L  ++     E     G+   +R                L  P S 
Sbjct: 106 VEAMREAARA--NGLKPKYSGRCREAGLGPGEGRVVR----------------LKAPISG 147

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   DM +  + F +  +    D  L +SDGS TY   ++A        G  ++I   G
Sbjct: 148 ATVVDDMVKGSVSFDNAELD---DMVLRRSDGSPTY---NMAVVVDDATMGVTHIIR--G 199

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            DH     R   +  A+     +        V +       K+SKR G    + 
Sbjct: 200 DDHLNNTPRQILIYKALGFPLPKFGH-----VPMILGPDKKKLSKRHGATAVME 248


>gi|218441136|ref|YP_002379465.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218173864|gb|ACK72597.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 909

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    +           +      K    ++     N TG +H+GH     + DTL   
Sbjct: 13  DPKTTEEKWQQYWQEQEVFKAEPNPKKPAYSLVIPPPNVTGSLHMGHAFNTALIDTLVRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+      I+ A       +++V    ++ L                        
Sbjct: 73  HRMCGYDTLCLPGIDHA-------SIAVQTILEKQL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L     +  Q+   II   LK L +  D               +
Sbjct: 102 -KAEGKTRYDIGREKFLERAWQWKQQSGGTIINQ-LKRLGLSADWSRQRFTLDESLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L   G +Y G         TQ    D +
Sbjct: 160 KTAFVTLYEAGLIYRGNYLVNWCPETQSAVSDLE 193



 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 70/167 (41%), Gaps = 21/167 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A   + +    +V +  LV   RD    KMSK A +
Sbjct: 501 TGFD-IIFFW-------VARMTMMAGYFTGQMPFKDVYIHGLV---RDENGKKMSKSANN 549

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--FCKVKEQSKENPVFYVQYAYARCRSI 464
            I    ++++ G+D++R+ ++        D    + +  +QS+      V+ +      +
Sbjct: 550 GIDPLILIEKYGADALRYTLIREVAGAGQDISLQYDRTSDQSE-----SVEASRNFANKL 604

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +  A+ +  +LD         P   E +  +  +   L+ + +V++ 
Sbjct: 605 WNAARFVMMNLDGKTPQELGNPSLDELELCDRWI---LSRFNQVVQQ 648


>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819763|sp|Q5L0V9|SYI_GEOKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 924

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 128/389 (32%), Gaps = 93/389 (23%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK  +ELL    E KW+P   +  +  M++  R D      +A  +   +F  E     G
Sbjct: 415 DKIRNELLQAIKETKWIPEWGEIRIHNMVRD-RGDWCISRQRAWGVPIPVFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         + D   + F S
Sbjct: 470 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++ D        DL        R  D  +Y+ GSD   G+     + A 
Sbjct: 530 ---GSSHQAVLVERD--------DLV-------RPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V+++ G+D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQFGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ S+          Y + R+ FR       D D +     +     E  
Sbjct: 627 ADVRISDHILKQVSE---------VYRKIRNTFRFMLGNLFDFDPNQNAVPI----GELG 673

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHWSHGRE 541
             +  ++  L +    ++ A  +          YD A+V+H             +     
Sbjct: 674 EVDRYMLAKLNKLIAKVKKAYDS----------YDFAAVYHEMNHFCTVELSAFY----- 718

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASII 570
               + +       +  R     AV +++
Sbjct: 719 LDMAKDILYIEAADSRAR----RAVQTVL 743


>gi|25010562|ref|NP_734957.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457458|sp|Q8E6S0|SYV_STRA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23094915|emb|CAD46136.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 884

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +      +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEEGRYQTWLDQDVFKPSGDTEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|229170939|ref|ZP_04298540.1| Glutamyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612479|gb|EEK69700.1| Glutamyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 491

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 96/309 (31%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFISED--------DFHRGDP--------SPIRDIIDNLARQGYVYEGI 290
           +DL    + +  +++E+           RG+             + +     +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQISRGETPRYAGNHRDLTEEQMKGFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPVDRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|27467210|ref|NP_763847.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866107|ref|YP_187766.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241861|ref|ZP_04796306.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|30316150|sp|Q8CTU1|SYC_STAES RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216111|sp|Q5HRM3|SYC_STAEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|27314752|gb|AAO03889.1|AE016744_292 cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636765|gb|AAW53553.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234639|gb|EES36951.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 466

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 137/421 (32%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +     + +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMHHMGEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYH----ELGSTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EV  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++       +     E      Q+   L ++  V+++         +  + YDLA + + 
Sbjct: 325 IEE---REQIASDLEEQSEYIQQIDKILNQFETVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|323490978|ref|ZP_08096172.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395334|gb|EGA88186.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 652

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 103/332 (31%), Gaps = 52/332 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  D +A      G++V     +++ G +I   A        +A   
Sbjct: 17  PSGKFHIGTAYTTVASDAMARYKRLRGFDVRFLTGMDEHGQKIEEKANEA----GKAPQE 72

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++         +  +  +   + + E      E+      D        I + + + 
Sbjct: 73  FVDEMAAAAKQVWSVMDITYDDFIRTTEERHKEGVERIFKTFLDNG-----DIYKGEYEG 127

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMD 305
                 + F +E+    G+       +  +  + Y      Y   L        +  + +
Sbjct: 128 WYCTPCESFFTENQLENGNCPDCGRPVQKVKEESYFFNMKKYASRLLEYYENNVEFIEPE 187

Query: 306 RKQLLFRSTMV---------------------GDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            ++    +  +                     GD      +  D    Y  + L Y   +
Sbjct: 188 SRKNEMINNFIKPGLEDLSVSRTSFDWGIPVPGDPKHVIYVWVDALSNYITS-LGY-GSE 245

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
            +  FD      ++V+G D    + R   +      ++        +      + +DG  
Sbjct: 246 DDSLFDKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKDG-- 299

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            KMSK  G+ +    +V+  G D+ R+ +L  
Sbjct: 300 -KMSKSKGNVVYPEMLVERYGLDATRYFLLRE 330


>gi|322383210|ref|ZP_08057021.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152479|gb|EFX45265.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 906

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 56/214 (26%), Gaps = 33/214 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS   K      +    +      +     I     N TG +H+GH     + D + 
Sbjct: 33  TYDPSQAEKKWYDYWIEKGFFKAGQNPEREPYMIVIPPPNVTGMLHIGHALDFTLQDIII 92

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                                   LP   + G+  +   +
Sbjct: 93  RAKRMQGYDAL--------------------------------WLPGSDHAGIATQTKVE 120

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   E +L  V D+  +     IR+    + +  D          G   
Sbjct: 121 QKLREEGVSRYDLGREAFLEKVWDWK-ELYAGTIREQWGKMGLSLDFSRERFTLDEGLSK 179

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +R +   L  +G +Y G          +    D
Sbjct: 180 AVRKVFVKLYDKGLIYRGKYIINWDPAARTALSD 213



 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 17/162 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +IY   +        + +      +   +  ++      L RD    KMSK  G+
Sbjct: 510 TGYD-IIYFWVAR------MIFSSLEFTGQIPFKDVLVHG----LVRDAEGRKMSKSLGN 558

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    V+ + G+D++R+M+       + L F + +V++       F  +   A   ++ 
Sbjct: 559 GIDPLEVIKQYGADAMRYMLSTSSTPGQDLRFRWERVEQARN----FANKIWNASRFALM 614

Query: 466 RQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYP 506
                   DLDF      +       F+ +   +   L +Y 
Sbjct: 615 NLEGFNMEDLDFGGELGTSDRWILHRFNETARDVTRLLDQYE 656


>gi|229125605|ref|ZP_04254637.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228657797|gb|EEL13603.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 491

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 98/294 (33%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    ++  K   +LL           +  + +  M    
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLE----------RGLAYKCYMTEEE 120

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +           E   + G+      + +     +G +       P ++     D+ 
Sbjct: 121 LEAEREGQIAR---GETPRYAGNHRELTEEQVKEFEAEGRIPSIRFRVPANRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|213406936|ref|XP_002174239.1| glutamyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212002286|gb|EEB07946.1| glutamyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 525

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 69/424 (16%), Positives = 127/424 (29%), Gaps = 104/424 (24%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSG--------------YEVTREYYIN 168
           + +PTG +H+G  R A+     A       ++                  Y+V R ++I 
Sbjct: 27  APSPTGSLHLGSLRTALYNYLFARSNGGLFVLRIEDTDQKRRIPGSEQEIYQVLRRFHI- 85

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D                 +   +  S        G Y++     L  KY+ +L+N     
Sbjct: 86  DW---------------DEGPSHETSWNNRDGPYGPYIQSQRLSLYQKYAEQLINQG-RA 129

Query: 229 WLPIVKDYSVQAMMKIIRD--DLKALNIQHDIFISEDDFH---RGDPSPIRDII-DNLAR 282
           +        +Q M  I R      + +       SE       +  P  IR  + D +  
Sbjct: 130 YRCFCSTERLQKMQSIARKIGSSGSYDRHCMSLTSEQVLELRGQNVPYVIRAKMPDKMTS 189

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                 G L P  SK +             +T      D  ++KSDG  TY  A++    
Sbjct: 190 FNDSVYGCLSPGSSKRST------------ATPTAFHDDFVIMKSDGFPTYHFANV---V 234

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +E    ++I   G++      +   +  A   K  Q        + L  +    K+SK
Sbjct: 235 DDHEMHITHVIR--GAEWIPSTYKHMELYRAFDWKPPQFAH-----LPLLFNKDGSKLSK 287

Query: 403 RAG---------DFITLRHVVDEVGS----------------DSVRFMMLWRKNSELLDF 437
           R           D      V++ V                  D +R   L       +  
Sbjct: 288 RQNHAHVQHLLSDGFMPEAVLNHVALMGWSGKGKVSDFLQMDDMIRLFSLKEITKGSVTV 347

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           D  K++  +K                +  +A+      +       ++ ++     S+L+
Sbjct: 348 DLGKLEFLNK--------------HHLAHKAETQAGCFELAKEALPLLQKQYTVKDSDLE 393

Query: 498 LIVH 501
           +I  
Sbjct: 394 IIAK 397


>gi|30018358|ref|NP_829989.1| glutamyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29893898|gb|AAP07190.1| Glutamyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 496

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 96/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 21  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 75

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L  + D  +  G   G Y +    ++  K Y   L      K     ++   +   +I 
Sbjct: 76  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLERGLAYKCYMTEEELEAEREGQIA 135

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +       H     E              +     +G +       P ++     D+ 
Sbjct: 136 RGETPRYACNHRELTEEQ-------------VKEFEAEGRIPSIRFRVPANRDYTFKDIV 182

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 183 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 234

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 235 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 283


>gi|81428459|ref|YP_395459.1| valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|90101528|sp|Q38XD1|SYV_LACSS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|78610101|emb|CAI55150.1| Valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 882

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  N        +I     N TG +H+GH     + D L   
Sbjct: 12  DPNQVEDGRYQDWLKEDLFKPNANPDAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLAE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                 I D    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKDE-------------YAATIHDQWAKMGLSLDYSRERFTLDDGLSDAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  NL  +G +Y G          +    D
Sbjct: 159 RKVFVNLYNKGLIYRGEYIINWDPKARTALSD 190



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 66/175 (37%), Gaps = 21/175 (12%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKR 403
           ++R F     V G D   +      +  ++   + +    +L     L RD    KMSK 
Sbjct: 472 FKRYFPTNTLVTGYD-IIFFWVSRMIFQSLEFTEQRPFEHVLIHG--LIRDEQGRKMSKS 528

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            G+ I    V+++ G+D++R+ +       + + F + K+              A+    
Sbjct: 529 LGNGIDPMEVIEKYGADALRWFLTSGSTPGQDVRFSYTKMDA------------AWNFIN 576

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            I+  ++ +  +L+    P  V    +   T +      L++  + + + T   E
Sbjct: 577 KIWNASRFVIMNLEDTPAPTKVPEAANLDLTDKW----ILSQLNQTVADVTRLYE 627


>gi|77412415|ref|ZP_00788722.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161529|gb|EAO72533.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 884

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +      +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEEGRYQTWLDQDVFKPSGDTEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|296876999|ref|ZP_06901043.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432034|gb|EFH17837.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 883

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYATTIKQQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPNDDRYKDLI 243


>gi|228472882|ref|ZP_04057639.1| isoleucine-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275464|gb|EEK14241.1| isoleucine-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 1138

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 130/363 (35%), Gaps = 65/363 (17%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCD---MD 305
             I   I+ +ED         + ++I  + +    G + E      K     + +   +D
Sbjct: 523 WGIPLPIWRTEDTKEEKIIGSVEELITEINKSVAAGLMQENPFKDFKVGDMSEANYDLID 582

Query: 306 RKQLLFRSTMVGDDVDRPLLK-SDGSYTYF-AADLAYFKCKYERGFDNMIYV-------- 355
             + +  + ++  D  +P+ + SD    +F +  + Y +  Y     ++I          
Sbjct: 583 LHKNIVDTIVLVSDSGKPMKRESDLIDVWFDSGSMPYAQVHYPFENKDLIDKGKAFPADF 642

Query: 356 --MGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
              G D   G+   L A+A +V +  A  NV+   LV    D    KMSKR G+ +    
Sbjct: 643 IAEGVDQTRGWFYTLHAIATSVFDSVAYKNVMSNGLV---LDKNGQKMSKRLGNAVDPFE 699

Query: 413 VVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSI 464
            +++ G+D+ R+ M+   N  + L FD   ++E  ++          F+  YA       
Sbjct: 700 TLEKYGADATRWYMISNANPWDNLKFDVEGIEEVRRKFFGTLYNTYSFFALYANLD---- 755

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK---- 520
                  + + +  L  R  I +    +     LI         ++ A +  EP +    
Sbjct: 756 ----GFTYAEAEVPLQKRPEIDRWILSELH--TLIAK-------VKEAFLDYEPTRATRL 802

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII-GV 579
           ++ ++ +        +       R RF +    +  +            + + L ++  +
Sbjct: 803 ISDFVQE---NLSNWY---VRLCRRRFWKGEYEEDKIS-------AYQTLYTCLEVVAKL 849

Query: 580 ESP 582
            +P
Sbjct: 850 SAP 852


>gi|169825668|ref|YP_001695826.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168990156|gb|ACA37696.1| Methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 663

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 104/332 (31%), Gaps = 52/332 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  D +A      GY+V     +++ G +I   A        +   +
Sbjct: 22  PSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQEKAAEA----GKHPQD 77

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +++ E       L  +  +   + + E      EK      D        I + + + 
Sbjct: 78  YVNEIAESAKKLWALMDITYDDFIQTTQERHTKAVEKIFQKFLDNG-----DIYKGEYEG 132

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMD 305
                 + F +E     G+       +  +  + Y      Y   L     +  +  + +
Sbjct: 133 WYCTPCESFFTETQLVDGNCPDCGRPVHKVKEESYFFNMKKYADRLLAYYEENLEFIEPE 192

Query: 306 RKQLLFRSTMV---------------------GDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            ++    +  +                     GD      +  D    Y  + L Y    
Sbjct: 193 SRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDAKHVIYVWVDALTNYITS-LGYLSD- 250

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
            E  F+      ++V+G D    + R   +      ++        +      + +DG  
Sbjct: 251 DETLFNKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKDG-- 304

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            KMSK  G+ I    +++  G D+ R+ +L  
Sbjct: 305 -KMSKSKGNVIYPEMLIERYGLDATRYFLLRE 335


>gi|225175195|ref|ZP_03729191.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169371|gb|EEG78169.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 881

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   L    +    +            I     N TG +H+GH     + D L   
Sbjct: 11  DPANVEDRLYQKWLDNNNFQAPGDPDKEPFTIVIPPPNVTGTLHMGHALDNTIQDILIRR 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                ++                                   LP   + G+  +   +E 
Sbjct: 71  KRMQDFDTL--------------------------------WLPGTDHAGIATQIKVEEH 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V D+  +   +IIR  L+ L +  D          G    +
Sbjct: 99  LAADGVSRYDLGREAFLDKVWDWKEEYHARIIRQ-LQKLGVSCDWSRERFTMDEGCSHAV 157

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L  +G +Y G
Sbjct: 158 REVFVTLYERGLIYRG 173


>gi|146297043|ref|YP_001180814.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410619|gb|ABP67623.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 874

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 75/268 (27%), Gaps = 42/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPQEVEDRLYKMWLEKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ + +E 
Sbjct: 66  KRMQGY---------------------------CALWVPGTDHASIATEAKIVEKMKEEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I + LK L    D          G  + +
Sbjct: 99  LTKEMIGREKFLERAW------EWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +++   L  +G +Y+G              S    + +  + +L +      D+    ++
Sbjct: 153 KEVFVRLYEKGLIYKGERMINWCPTCKTTISDAEVEYEEKKGKLWYIKYPAKDNSFYVVV 212

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 213 ATT-RPETMLGDTAVAVNPNDERYKHLI 239



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 32/186 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLKYFYPTDVLVTAYD-IIFFWVAR------MIFSAVEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    ++++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEIIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    N  P ES+F  +E  +   L+    +I+ 
Sbjct: 572 ---------ANKIWNAARFVIMNLDID---TNYKPDESKFTFTERWI---LSRLDTLIKE 616

Query: 512 ATIAQE 517
            T   E
Sbjct: 617 VTENLE 622


>gi|284053184|ref|ZP_06383394.1| valyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291568160|dbj|BAI90432.1| valyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 908

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 53/214 (24%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P                +  +    G    I     N TG +H+GH     + D L   
Sbjct: 13  DPFSTEAKWQQYWEQKQVFKADPNHPGEPYCIMIPPPNVTGSLHMGHAFNNSLIDALIRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                             LY   +D        +  + + +E 
Sbjct: 73  HRMRGYNT---------------------------LYLPGTDHASIAVQTILERQLREEG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y      F +  W    K  S   ++      L+ L +  D          G    +
Sbjct: 106 KTRYDLGRDKFLDRAWQ--WKQESGGKIVNQ----LRRLGVSCDWTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +    L   G +Y G         ++    D +
Sbjct: 160 IEAFVRLYEDGLIYRGEYLVNWCPASESAVSDLE 193



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 106/313 (33%), Gaps = 37/313 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           +    NF  ++W  + +D+ V+     I   L     Q   + +  +           I+
Sbjct: 381 NDHSPNFVPQRWQKVYRDWLVKLEDWCISRQLW-WGHQIPAWYAVSETGGEITDDTPFIV 439

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
              A +    E  +         + D D     F S +          K+    TY    
Sbjct: 440 ARTAAE--AQEKAIASFGEGVKLQQDPDVLDTWFSSGLWPFSTLGWPEKTADLQTY---- 493

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
             Y       GFD +I+         V R+  +    ++K     V +  L+ L  +G  
Sbjct: 494 --YPTNTLSTGFD-IIFFW-------VARMTMMGGYFTDKMPFQTVYIHGLI-LDENGK- 541

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK AG+ I    ++D+ G+D++R+ ++        D      + + +      V+ +
Sbjct: 542 -KMSKSAGNGIDPLLLIDKYGTDALRYTLMREVIGAGQDIRLEYDRSKDES---PSVEAS 597

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
                 ++  A+ +  +L      +   P   E + S+  +   L+ + + ++       
Sbjct: 598 RNFTNKLWNAARFVLMNLKGQTPAQLGTPNLEELELSDRWI---LSRFNQTVKQT----- 649

Query: 518 PYKLAFY--LYDL 528
                 Y   Y L
Sbjct: 650 ----CDYMNAYSL 658


>gi|309390254|gb|ADO78134.1| methionyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 653

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 132/406 (32%), Gaps = 47/406 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---- 187
           P+  +H+GH    V  DT+A      G++       ++ G +I   A +     ++    
Sbjct: 15  PSDKLHIGHAYTTVAADTIARYKKMRGFDTMFLTGSDEHGQKIERKAQAAGKEAKEYVDQ 74

Query: 188 --ALYNNDSDLPEGYY----------PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             A + N  D  +  Y              ++ + ++L D+         E  +    + 
Sbjct: 75  IVATFKNLWDKLDIEYDYFIRTTEARHEKVVQQIFEKLYDQ-GDIYKGKYEGWYCTPCEA 133

Query: 236 YSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +  +  ++  +++    +   ++ ++ E+ +          +++++       E      
Sbjct: 134 FWTERQLEEAKEEKVCPDCHREVEWVEEESYFFKMSKYADRLLEHIKDHPEFIEPESRRN 193

Query: 295 KSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +     +  +D   +   +   G     DD     +  D    Y  A + Y     +  F
Sbjct: 194 EMINFIENGLDDLSVSRTTFEWGIPVPIDDDHVIYVWIDALSNYLTA-IGYQTD--QENF 250

Query: 350 DNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +      ++++G D    + R   +   +      + +        +      KMSK  G
Sbjct: 251 EKYWPADLHLVGKD----ILRFHTIIWPIIIMALDLELPKQVFGHGWLLSETGKMSKSKG 306

Query: 406 DFITLRHVVDEVGSDSVRFMMLW------------RKNSELLDFDFCKVKEQSKENPVFY 453
           + +    ++D+ G D++R+ +L                 + ++ D            V  
Sbjct: 307 NVVDPVVLIDDFGKDAIRYYLLREVAFGTDGKYSTESLIQRINSDLANDLGNLLNRTVSM 366

Query: 454 V-QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           V QY  +    +  +A      +D     +  +  E E     + L
Sbjct: 367 VDQYFDSEIPKVAEKADLDQELIDLAAQTKKEVEIEMEKLKYTVAL 412


>gi|90103532|sp|Q8FN65|SYV_COREF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 903

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 71/241 (29%), Gaps = 41/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +   +    +I     N TG +H+GH     + D LA  
Sbjct: 25  DPKAVEADLYQGWVDAGYFTADPASEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARR 84

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   + ++ L   +      Y    +++ V  E 
Sbjct: 85  KRMQGFEVL-------WLPGMDHAGIATQTKVEEMLKETEGKSRYDYSREEFIEKV-WEW 136

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                           I + ++A+    D          G    +
Sbjct: 137 KKEYG------------------------GKIGEQMRAIGDSVDWSRERFTLDEGLSRAV 172

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L   G +Y+       S   +           D++ + +  R   + DD    +
Sbjct: 173 QTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHVV 232

Query: 325 L 325
           +
Sbjct: 233 V 233


>gi|315658074|ref|ZP_07910946.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496403|gb|EFU84726.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 876

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 57/202 (28%), Gaps = 34/202 (16%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
             V SG         K     +     N TG +H+GH     + D +  +    GY+   
Sbjct: 19  EWVNSGYFNTSTDKSKKPYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYD--T 75

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
            Y        ++   ++   + +  L             G+    +G+E           
Sbjct: 76  LYLPG-----MDHAGIATQAKVEAKLNE----------QGISRHDIGRE----------K 110

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
           F E+ W         +     IR     L +  D          G    ++ +  +L  +
Sbjct: 111 FLEQAWK------WKEEYASFIRQQWAKLGLGLDYSRERFTLDEGLSQAVKKVFVDLYNK 164

Query: 284 GYVYEGILPPPKSKTTQKCDMD 305
           G +Y G          +    D
Sbjct: 165 GIIYRGERIINWDPKARTALSD 186



 Score = 38.4 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 23/171 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       +E++   +VLL  LVR   DG   KMSK  G+
Sbjct: 479 TGYD-IIFFW-------VARMIFQGLEFTERRPFQDVLLHGLVR-AEDGR--KMSKSLGN 527

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    V++E G+DS+R+ +    +    D  +   K +S  N              I+ 
Sbjct: 528 GVDPMDVIEEYGADSLRYFLATGSSPGH-DLRYSTEKVESVWN----------FINKIWN 576

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            A+    ++  D F    I        ++  ++  L E    + + +   E
Sbjct: 577 GARFSLMNIGED-FAVEDIDLSGNLSLADKWILTRLNETIETVTDLSDKYE 626


>gi|259507900|ref|ZP_05750800.1| valine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259164534|gb|EEW49088.1| valine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 904

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 71/241 (29%), Gaps = 41/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +   +    +I     N TG +H+GH     + D LA  
Sbjct: 26  DPKAVEADLYQGWVDAGYFTADPASEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARR 85

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   + ++ L   +      Y    +++ V  E 
Sbjct: 86  KRMQGFEVL-------WLPGMDHAGIATQTKVEEMLKETEGKSRYDYSREEFIEKV-WEW 137

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                           I + ++A+    D          G    +
Sbjct: 138 KKEYG------------------------GKIGEQMRAIGDSVDWSRERFTLDEGLSRAV 173

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L   G +Y+       S   +           D++ + +  R   + DD    +
Sbjct: 174 QTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHVV 233

Query: 325 L 325
           +
Sbjct: 234 V 234


>gi|149369514|ref|ZP_01889366.1| isoleucyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356941|gb|EDM45496.1| isoleucyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 1132

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+       + 
Sbjct: 641 GVDQTRGWFYTLHAIATMIFDDVAYKNVVSNGLV---LDKNGQKMSKRLGNAADPFETLK 697

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G D+ R+ M+   N  + L FD   + E ++K     Y  Y++    +          
Sbjct: 698 TYGPDATRWYMISNANPWDNLKFDLDGISEVRNKFFGTLYNTYSFFSLYANLDNFNYSEA 757

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           D+  +  P       SE +T    L+         ++ A    EP
Sbjct: 758 DIALEKRPEIDRWILSELNT----LVA-------TVDEAFTEYEP 791


>gi|145632859|ref|ZP_01788592.1| valyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986515|gb|EDJ93081.1| valyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 954

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G          +    D +
Sbjct: 158 AVKEVFVRLHEEGVIYRGKRLVNWDPKLRTAISDLE 193


>gi|163813949|ref|ZP_02205343.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
 gi|158450819|gb|EDP27814.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
          Length = 920

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 69/245 (28%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 47  TYDPSQIEDRLYRKWEEKKYFHAEVDRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILI 106

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A++   +  + L     D  E      +LKH   
Sbjct: 107 RFKRMQGYSAL-------WQPGTDHAAIATEVKVTEKLKEQGIDKKEIG-REEFLKH-AW 157

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              ++Y + +++                         LK +    D          G   
Sbjct: 158 AWKEEYGNRIVSQ------------------------LKKMGSSADWDRERFTMDEGCSR 193

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +GY+Y+G          +    D + +          ++ P++   G +
Sbjct: 194 AVKEVFVRLYDKGYIYKGSRIINWCPVCKTSISDAEVIHEEQDGYFWHINYPVVGEPGRF 253

Query: 332 TYFAA 336
              A 
Sbjct: 254 VEIAT 258


>gi|313895444|ref|ZP_07829001.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976339|gb|EFR41797.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 514

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 99/331 (29%), Gaps = 51/331 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V                      +  Q    
Sbjct: 16  PSAKLHIGHAYCTTVADTIARFKRLAGYDV------------FFLTGSDEHGQKIQQAAE 63

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDD 248
            +   P+ Y   +        +L      + +   EE+   +V++   Q      I + +
Sbjct: 64  KEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIYKGE 123

Query: 249 LKALNIQHDIFI----------------------SEDDFHRGDPSPIRDIIDNLARQGYV 286
            K L                              SE+ +          ++  +      
Sbjct: 124 YKGLYCTPCESYWTELQLDENGNCPDCHRPVQEVSEEAYFFRMSKYADRVLAYIKEHPDF 183

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYF 341
            + +    +  +  +  ++   +   S   G     D      +  D    Y    + Y 
Sbjct: 184 IQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLTP-IGYM 242

Query: 342 KCKYERGFDNMIYV--MGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             K          V  +G +    +      +  A+     +    +     L  DG   
Sbjct: 243 HDKETFHKYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPK---KVYGHGWLIVDGA-- 297

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ +    +++E G+D++R+ +L  
Sbjct: 298 KMSKSVGNVVDPIALIEEFGADAIRYFLLRE 328


>gi|268316848|ref|YP_003290567.1| glutamyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334382|gb|ACY48179.1| glutamyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 500

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 105/285 (36%), Gaps = 34/285 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  +E Y+   GA+   +  S+ 
Sbjct: 17  APSPTGFLHIGGLRTALYNFLFARKHGGQFILRIE--DTDQERYV--PGAE-EDIIESLR 71

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D   P G Y     K    EL  +Y+ +L+      +      +     +
Sbjct: 72  WAGLTYDEGPDVGGPCGPYRQSERK----ELYQQYAKQLVEAGHAYY-----AFDTPEEL 122

Query: 243 KIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +R  L+        +        R   +   + ++ L  +G  Y   L  P+ +T + 
Sbjct: 123 EEMRRRLQKSGNPSPKYDAITRMSMRNSLTLPAEEVERLLAEGVPYVIRLKVPRRETIRF 182

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R  + F S+ +    D+ L+KSDG  TY    +A     +  G  ++I   G +  
Sbjct: 183 YDLIRGWVSFESSEID---DQVLIKSDGMPTYH---MANVVDDHLMGITHVIR--GEEWL 234

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               +   +   +  +  Q+       + L       K+SKR  +
Sbjct: 235 SSTPKHVLLYRYLGWEMPQMAH-----LPLILSPKGGKLSKRNAE 274


>gi|227824227|ref|ZP_03989059.1| valyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904726|gb|EEH90644.1| valyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 885

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 74/268 (27%), Gaps = 40/268 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K   +  V    + + +       ++     N TG +H+GH     + D L   
Sbjct: 12  DPAAVEKKWYAYWVEHGFFHQPVDKSRKPFSVVIPPPNITGKLHMGHALDNTLQDILVRW 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G         + AG     LA  +    +     N   L               + 
Sbjct: 72  HRMMGDNTCWLPGYDHAG-----LATQIKVEEELKKKEN---LTRYDLGREKFLERVWQW 123

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y   ++                          LK+L I  D          G    +
Sbjct: 124 KEEYGDRIVTQ------------------------LKSLGISCDWDRQRFTMDEGLSRAV 159

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           R+   +L  +G +Y+G              S    +   D   L + +  +  +  R L 
Sbjct: 160 REAFVSLYEKGLIYKGTRIINWCVNCRTALSDVEVEHQDDEGHLWYVNYPIEGEAGRYLQ 219

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + +++
Sbjct: 220 IATSRPETIPGDTAVAVNPKDERYKDLV 247



 Score = 38.0 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 12/97 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   +     +         +  K   I+        L RD    KMSK  G+
Sbjct: 488 TGYD-IIFFWVAR---MITMGMEFMKEIPFKHVFIH-------GLVRDEQGRKMSKSLGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            I    VVD+ G+D++RFM++        + F + ++
Sbjct: 537 GIDPLEVVDKYGADTLRFMLITGNTPGNDMRFYWNRI 573


>gi|188585735|ref|YP_001917280.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350422|gb|ACB84692.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 885

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 59/195 (30%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +      +    +  +   +     +     N TG +H+GH     + D +    
Sbjct: 12  PEKVEQKWYQKWLDADSFKASCDHRDKFSVV-IPPPNVTGSLHMGHALDNTLQDVIVRFK 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY+       + AG    T                                V + LA
Sbjct: 71  RMQGYDTLWMPGTDHAGIATQT-------------------------------KVEEHLA 99

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +      +   EK+L  V  +  +     I + LK L +  D          G    +R
Sbjct: 100 QEDGVSKYDLGREKFLEKVWAWK-ETYHDSITNQLKKLGVSVDWSRERFTMDEGCSKAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++  +L  +G +Y+G
Sbjct: 159 EVFVSLYEKGLIYQG 173



 Score = 37.6 bits (86), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 12/102 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +     +++   +V +  LV   RD    KMSK  G+
Sbjct: 484 TGYD-IIFFW-------VARMIFMGLEFMKERPFDDVFIHGLV---RDAHGRKMSKSLGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSK 447
            I    ++DE G+D++R+ ++        + F + KV+    
Sbjct: 533 GIDPLEIIDEYGADTLRYTLVTGITPGNDMRFSYDKVEASRN 574


>gi|52425611|ref|YP_088748.1| valyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81825506|sp|Q65S97|SYV_MANSM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52307663|gb|AAU38163.1| ValS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 954

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L +       +  +        +I     N TG +H+GH     + DTL 
Sbjct: 10  RFDASAVEQALYNHWEQKGYFKPSYDAGRPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RYHRMQGDNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A + +    ++  E ++  + D+   +    I   ++ L    D          G   
Sbjct: 99  KIAAEENKTRHDYGREAFIEKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDEGLSE 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|296500922|ref|YP_003662622.1| glutamyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296321974|gb|ADH04902.1| glutamyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 491

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 98/294 (33%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    ++  K   +LL           +  + +  M    
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLE----------RGLAYKCYMTEEE 120

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +           E   + G+      + +     +G +       P ++     D+ 
Sbjct: 121 LEAEREGQIAR---GETPRYAGNHRELTEEQVKEFEAEGRIPSIRFRVPANRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|224476754|ref|YP_002634360.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783557|sp|B9DND4|SYV_STACT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|222421361|emb|CAL28175.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 876

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        V    +  +         I     N TG +H+GH     + D L  +
Sbjct: 8   NPTEVEAGRYQEWVEKGYFRPSGDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDILTRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L             G+    +G+E 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKLNE----------QGISRHDIGRE- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F EE W    KD         IR     L +  D          G    +
Sbjct: 110 ---------KFLEEVW--SWKD----EYASFIRQQWAKLGLGLDYDRERFTLDEGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  ++  +G +Y G          +    D
Sbjct: 155 RKVFVDMYNKGLIYRGERIINWDPEARTALSD 186



 Score = 38.4 bits (88), Expect = 3.8,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 69/209 (33%), Gaps = 25/209 (11%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P  ++     D D     F S +          +   D    Y    L
Sbjct: 419 KETGEIYVGETEPEDAEN-WVQDEDVLDTWFSSGLWPFSTLGWPDVESEDYQRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+   +        +        E+    + +L   +    DG   
Sbjct: 478 VT-------GYD-IIFFWVAR------MIFQGLEFTGERP--FDDVLLHGLVRAEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +    V++E G+DS+R+ +    +    D  +   K +S  N  F  +   
Sbjct: 520 KMSKSLGNGVDPMDVINEYGADSLRYFLATGSSPGH-DLRYSTEKVESVWN--FINKIWN 576

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           A   SI     + F   D DL     +  
Sbjct: 577 AARFSIM-NIGEEFKFEDIDLSKNLSLAD 604


>gi|313669053|ref|YP_004049337.1| isoleucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006515|emb|CBN87979.1| putative isoleucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 929

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 113/367 (30%), Gaps = 56/367 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQKIEEKGI--EAWFSLDKSELLSAEDCEHYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----LKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVI 509
                 +Y R R+            DF+     V   E  E D   L L   L       
Sbjct: 654 ------SYRRIRNTLSFLFANLS--DFNPIEDAVPQAEMVEIDRYALVLARRLQ------ 699

Query: 510 ENATIAQEPYKLAFYLYDLA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           E       P     Y +  A               +    ++ RL   QA++R     + 
Sbjct: 700 ERVAGDFYP----RYAFHFAVKEMVSFCSEDLGAFYLDILKD-RLYTTQADSRARRSAQT 754

Query: 561 QLVHAVA 567
            L H   
Sbjct: 755 ALYHITR 761


>gi|300769703|ref|ZP_07079586.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181105|ref|YP_003925233.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300492746|gb|EFK27931.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046596|gb|ADN99139.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 889

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 71/240 (29%), Gaps = 35/240 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 14  DPTAVEAGRYQTWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L             G+    +G+E 
Sbjct: 74  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKLRE----------QGISRYDLGRE- 115

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ +E                II+     + +  D          G    +
Sbjct: 116 --KFVQQVWDWKDE-------------YASIIKQQWAKMGLSLDYSRERFTMDDGLSDAV 160

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           + +  +L  +G +Y G          +    D +  +      G         +D  YT+
Sbjct: 161 KKVFVDLYNKGLIYRGEYIINWDPQARTALSDIE--VIHKDDKGAFYHVKYPFADKDYTF 218


>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 923

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 417 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 471

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 472 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 531

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 532 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 571

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 572 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 628

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 629 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 678

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 679 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 725

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 726 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 756


>gi|77406223|ref|ZP_00783292.1| glutamyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175173|gb|EAO77973.1| glutamyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 478

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 58  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 101

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 102 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVSESGI 159

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 160 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 213 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|77920049|ref|YP_357864.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|84029525|sp|Q3A1R3|SYI_PELCD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77546132|gb|ABA89694.1| Isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 927

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       +    E     +VL    V    DG   KMSK  G+ +   
Sbjct: 558 LYLEGSDQHRGWFHSSLLASVGTRELTPYKSVLTHGFVV---DGKGKKMSKSVGNVVAPE 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ + G++ +R  +  +   + +      ++  S          AY R R+  R     
Sbjct: 615 EVIKKYGAEILRLWVAAQDYRDDIRISNEILQRLSD---------AYRRIRNTARYILGN 665

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
               D     R+++  +   +     L   L +    +E A    E + +
Sbjct: 666 LSGFDPS---RDMVADDQLLELDRWALAK-LEDLAGRVEKAYEDYEFHII 711


>gi|33301674|sp|Q81J61|SYE_BACCR RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 485

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 96/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L  + D  +  G   G Y +    ++  K Y   L      K     ++   +   +I 
Sbjct: 65  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLERGLAYKCYMTEEELEAEREGQIA 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +       H     E              +     +G +       P ++     D+ 
Sbjct: 125 RGETPRYACNHRELTEEQ-------------VKEFEAEGRIPSIRFRVPANRDYTFKDIV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 172 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 224 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 272


>gi|148543447|ref|YP_001270817.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152856|ref|YP_001841197.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227363597|ref|ZP_03847714.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325681791|ref|ZP_08161310.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530481|gb|ABQ82480.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224200|dbj|BAG24717.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071393|gb|EEI09699.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978882|gb|EGC15830.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 675

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 133/435 (30%), Gaps = 75/435 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      GY+V   +Y+   G              +  L  
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFKRLMGYDV---FYL--TGT------------DEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++ + +    L    +K++    DY  +A+ KI +  L  
Sbjct: 60  EQKAEKLGMKPQEYVDQMAAQIKELWKK--LEITNDKFIRTTDDYHEKAVQKIFQQLLDQ 117

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I    +  + S DD      S + ++  +       G    G       + +    M 
Sbjct: 118 GDIYKGKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMS 177

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDNMIY 354
           +      +         +   R     +        DLA  +  +  G        +++Y
Sbjct: 178 KYANWLMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFNWGVKVPSDPKHVVY 237

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQIN-----------------V 383
           V              GSD     K+   A    V ++  + +                  
Sbjct: 238 VWIDALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKH 297

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
           ++       RDG   KMSK  G+ I    +VD  G D+ R+ +L          F     
Sbjct: 298 IIGHGWLTMRDG---KMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDF 354

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++   +    +     R  ++  + ++   +  +     F  ++    S+      +L+
Sbjct: 355 VDKVNYDLANDLGNLLNRTVAMINKYQNGKLVGTNDATTDFDADLEQTASDVIAEYKELM 414

Query: 500 VHLAEYPRVIENATI 514
                +   +     
Sbjct: 415 DK-TRFAEALATVWK 428


>gi|312865656|ref|ZP_07725880.1| glutamate--tRNA ligase [Streptococcus downei F0415]
 gi|311098777|gb|EFQ56997.1| glutamate--tRNA ligase [Streptococcus downei F0415]
          Length = 484

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 103/295 (34%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFVIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETHEHYRQSERL-----ELYQKYIDQLLEEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
           +  +   R+  +A   +   +++E   + G     +   I      G V    L   ++ 
Sbjct: 109 EEELATERERQEAAG-ETPRYVNE---YLGMSEEEKSAYITEREAAGIVPTVRLAVNEAG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G
Sbjct: 165 IYKWTDMVKGDIEFEGSNIG--GDWVIQKRDGYPTY---NFAVVIDDHDMRISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEPPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 757

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 59/193 (30%), Gaps = 34/193 (17%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + K + S  V    +    + K     +     N TG +H+GH     + D L      
Sbjct: 13  AVEKDIYSKWVEKGYFTAGDLTKKPYCIV-IPPPNVTGKLHLGHAWDTTLQDILCRYKRL 71

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY+V          + ++   ++   +  + L N           G+    +G+E    
Sbjct: 72  KGYDVL-------WVSGMDHAGIATQAKVDERLKNE----------GISRYDIGRE---- 110

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                  F +  W         +     IR     L +  D          G    +R +
Sbjct: 111 ------KFLDRAW------EWKEEYASTIRSQWAKLGLSLDYTRERFTLDEGLSKAVRKV 158

Query: 277 IDNLARQGYVYEG 289
             +L   G +Y+G
Sbjct: 159 FVDLYNDGLIYQG 171



 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 72/208 (34%), Gaps = 34/208 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G +  PK K     D D     F S +           +D    YF  D+  
Sbjct: 421 KETGEMYIG-MEDPKDKENWIQDEDVLDTWFSSALWPFSTLGWPESTDDLARYFPNDV-- 477

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   +  +    +          K    +VL+  LV   RD    KM
Sbjct: 478 ----LVTGYD-IIFFWVARMA---FQTRYCMKNRPFK----DVLIHGLV---RDSQGRKM 522

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-LDFDFCKVKEQSKE-----NPVFYV 454
           SK  G+ I    V++  G+D++RF +       L L FD  K++          N   YV
Sbjct: 523 SKSLGNGIDPMDVIENHGADALRFFLTTNSTPGLDLRFDEKKMESSWNFINKIWNAARYV 582

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           Q           Q  D  P LD D    
Sbjct: 583 QM----------QIGDTKPTLDVDCLSS 600


>gi|257870964|ref|ZP_05650617.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805128|gb|EEV33950.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 668

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 122/351 (34%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEKKAEEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  + L+   +K++    DY  +A+ KI +  L  
Sbjct: 66  -------GVDPQEYVDKMAADVKKLW--KTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   +++ + S  D      + + ++  +   +G+V    +        +   +    
Sbjct: 117 GDIYLGEYEGWYSVSDEEYFTETQLAEVYRD--EEGHV----IGGKAPSGHEVELVKESS 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             FR +      DR +   D    +                    DLA  +  ++ G   
Sbjct: 171 YFFRMSKY---ADRLVQYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFKWGIPV 227

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
               ++++YV              GSD     ++   A    V ++  + + +   ++ +
Sbjct: 228 TASPEHVVYVWIDALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+    D++R+ +L 
Sbjct: 288 ALDLPLPKKIFGHGWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLR 338


>gi|227510716|ref|ZP_03940765.1| glutamate--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189837|gb|EEI69904.1| glutamate--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 496

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 96/294 (32%), Gaps = 28/294 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A      G  + R   I D   + N            +
Sbjct: 11  APSPTGHLHIGNARTAIFNYLFAR--HNKGKFIIR---IEDTDTKRNVADGEKSQLENLK 65

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  +  + P+ G   G Y +    ++      +LL+          + Y  +  +   R
Sbjct: 66  WLGLDWDEGPDVGGDFGPYRQSERNDIYKPLLQQLLDEG-----KAYESYRTEEQLTADR 120

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D  KA     ++   E ++        +  I +   +G         PK       D+ +
Sbjct: 121 DAQKARG---EMPHYEYEYEGMTDEQKQQAIADAKAKGLKPVIRFKVPKDHDYAWDDIVK 177

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             + F S  +G D    + K DG+ TY FA  +     K    F       G DH     
Sbjct: 178 GNVSFNSDTIGGDF--VIAKRDGTPTYNFAVVVDDHMMKISHVFR------GDDHVANTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A   K      +   +  +       K+SKR    +        +G 
Sbjct: 230 KQLMIYEAFGWKAP----MFGHMSLIISADTGKKLSKRDESVLQFIEQYRNLGY 279


>gi|227513097|ref|ZP_03943146.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083672|gb|EEI18984.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 893

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +     +  +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 20  DPTAIENGRYNEWLQEGVFRPSGDKKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRK 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L                        
Sbjct: 80  KRMEGYDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++        I++    L +  D         +G    +
Sbjct: 109 -REQGISRYDLGREKFVEKVWEWK-DTFAATIKEQWAKLGLSLDYERERFTLDKGLSKAV 166

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 167 RRVFVDLYNKGLIYRGEYIINWDPQARTALSD 198



 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 19/166 (11%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G  Y G +  PK     + D D     F S +           +D    YF  D   
Sbjct: 436 KDTGETYVG-MEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMKRYFPTDT-- 492

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+         V R+   +   + ++   +VLL  L+   RD    KM
Sbjct: 493 ----LVTGYD-IIFFW-------VSRMIFQSLEFTHRRPFKDVLLHGLI---RDSQGRKM 537

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQ 445
           SK  G+ I    V+D+ G+D++R+ + +     + L F + K+   
Sbjct: 538 SKSLGNGIDPMDVIDKYGADALRWFLSVGGTPGQDLKFSYDKMDSA 583


>gi|313884451|ref|ZP_07818212.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620235|gb|EFR31663.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 675

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 119/352 (33%), Gaps = 82/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +V D +A      GY+V      ++ G +I   A  +          
Sbjct: 17  PSGRLHIGNSYSTLVSDAMARYKRLMGYDVYFLTGTDEHGQKIEQKAADL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  E L    + ++    DY  +A+  I    L  
Sbjct: 67  -------GIEPQAYVDGMAADIKALW--EKLKISNDGFVRTSDDYHQKAVQDIFERLLAQ 117

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   +++ + S  D      + + ++  +    G V  GI P       +   +  + 
Sbjct: 118 GDIYLGEYEGWYSVSDEEYFTETQLSEVFKD--ENGKVIGGIAPT----GNKVELVKEES 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAA-----------------DLAYFKCKYERGF-- 349
             F+   + +  DR L   D    +                    DLA  +  +  G   
Sbjct: 172 YFFK---LSNYTDRLLEYYDQHPDFITPAFRKTEMVNNFIKPGLEDLAVSRTSFTWGIPV 228

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              G+DH   + +   A    + +  ++ +++   ++ +
Sbjct: 229 KSNPKHVVYVWIDALSNYITKLGYGNDHQDIMDKFWPADVQVIGKDISRFHMIYWPILLM 288

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ I    ++D  G D  RF +L  
Sbjct: 289 ALDLPLPKKIYAHGWIVMKDGKMSKSRGNVIYPETLIDRYGLDVTRFYLLRE 340


>gi|288554646|ref|YP_003426581.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545806|gb|ADC49689.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 666

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 115/349 (32%), Gaps = 75/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V      ++ G +I   A             
Sbjct: 16  PSAKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQKAAE----------- 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  ++  +  ++   +    +++ +  ++   +D   + +  I    L+ 
Sbjct: 65  ------KGLTPQQFVDEIVADIQSLWKKLDISYDD--FIRTTEDRHKKVVQTIFERLLEQ 116

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +  +     G   P      +K         F
Sbjct: 117 GDIYLDEYEGWYSIPDETFYTELQLVDPIRDEDGKIIGGKSPDSGHPVEKVREQSY--FF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           + +      DR L   + + T+                    DLA  +  ++ G      
Sbjct: 175 KMSKY---ADRLLKFYEENPTFIQPESRRNEMINNFIKPGLEDLAVSRTSFKWGVQVPSN 231

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD 394
            ++++YV              G D+  + ++   A    V ++  + + +   ++ +  D
Sbjct: 232 PEHVVYVWIDALSNYITALGYGQDNDEFYQKYWPANVHLVGKEIVRFHTIYWPIMLMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWLLMKDGKMSKSKGNVVDPETLIDRYGLDALRYYLLRE 340


>gi|257440904|ref|ZP_05616659.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257196684|gb|EEU94968.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 901

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +      G  +            I     N TG +H+GH     + D L   
Sbjct: 9   DPSQVEDRIYQFWQDGGYFHTEADPDKKPYTIVMPPPNVTGQLHMGHALDNTMQDVLIRT 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ +  E 
Sbjct: 69  KRMQGY---------------------------AALWVPGTDHASIATEAKVVEAMRAEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W     D+  +   +I+   LK L    D          G    +
Sbjct: 102 LTKEMVGRDGFLERAW-----DWKTKYGNRIVSQ-LKKLGTSCDWQRERFTMDEGCSDAV 155

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y G
Sbjct: 156 KEVFVRLYDKGLIYRG 171



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 84/231 (36%), Gaps = 37/231 (16%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D  G+       +      KA  + +    +   RD    KMSK  G+ I    V+
Sbjct: 507 VTGYDIIGFWVSRMIFSGLAYTGKAPFDTVCIHGI--VRDSQGRKMSKSLGNGIDPLEVI 564

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            + G+D++RFM+L        D  + + K ++  N  F  +   A    +    +D  P 
Sbjct: 565 AQYGADALRFMLLDGSTPGN-DMRYSEKKVEAARN--FANKLWNATRFVLMNLPEDFQPG 621

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL---ASV 531
                     +P+ES+ D S+  ++  L +    +  A      +      +++   A+ 
Sbjct: 622 ----------LPEESKLDMSDKWVLTKLNQ----VAGAMTDNLDH------FEMGLAAAK 661

Query: 532 FHGH----WSHGRENPRLRFVQANNRKLT-MMRLQLVHAVASIINSGLNII 577
            +      +           + + + +     R  LV+    +++  L ++
Sbjct: 662 INSFIWDVYCDWFIEIAKPRLNSGDAEQADTARRVLVY----VLDKALKLL 708


>gi|229542227|ref|ZP_04431287.1| glutamyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326647|gb|EEN92322.1| glutamyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 486

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 103/296 (34%), Gaps = 38/296 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG +H+G+ R A+     A   +  G  + R   I D   Q   +   +    +Y 
Sbjct: 10  APSPTGFLHIGNARTALFNYLFAR--SKGGKFIIR---IEDT-DQKRNVEGGVESQLKYL 63

Query: 187 QALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKI 244
           + L  + D  +  G   G Y +    ++  KY  +LL+     K     ++   +   ++
Sbjct: 64  KWLGIDWDESIDVGGEYGPYRQSERLDIYKKYYEDLLDRGLAYKCYCTEEELEAEREAQL 123

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R  +   + +      ED                L  +G         P+ K     D+
Sbjct: 124 ARGVMPRYSGKCRHLTEEDR-------------KRLEAEGRKPSLRFHVPEGKVYTFNDI 170

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGY 363
            + ++ F S  +GD     ++K DG  TY       F    +     + +V+ G DH   
Sbjct: 171 VKGEVSFESDGIGDF---VIVKKDGMPTYN------FAVTIDDHLMKISHVLRGDDHISN 221

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +   +  A   +      +      L  +    K+SKR G  I       E+G 
Sbjct: 222 TPKQLMIYEAFGFEPPVFGHM-----TLIVNEHRKKLSKRDGSIIQFIEQYAELGY 272


>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 913

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 921

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|254782364|sp|C1EPQ9|SYI_BACC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 921

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|126662643|ref|ZP_01733642.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126626022|gb|EAZ96711.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 1147

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 19/166 (11%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   V +K A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 656 GVDQTRGWFYTLHAIGTLVFDKIAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFTTLA 712

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           E G D+ R+ M+   N  + L FD   V E + K     Y  Y++         A     
Sbjct: 713 EYGPDATRWYMISNANPWDNLKFDIEGVAEVRRKFFGTLYNTYSFFSLY-----ANIDGF 767

Query: 474 DLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEP 518
             +    P    P+   +  SEL  LI        V++ A    EP
Sbjct: 768 KYNEAEVPLQERPEIDRWILSELNTLIQ-------VVDEAYAEYEP 806


>gi|227513731|ref|ZP_03943780.1| glutamate--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227083050|gb|EEI18362.1| glutamate--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 496

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 96/294 (32%), Gaps = 28/294 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A      G  + R   I D   + N            +
Sbjct: 11  APSPTGHLHIGNARTAIFNYLFAR--HNKGKFIIR---IEDTDTKRNVADGEKSQLENLK 65

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  +  + P+ G   G Y +    ++      +LL+          + Y  +  +   R
Sbjct: 66  WLGLDWDEGPDVGGDFGPYRQSERNDIYKPLLQQLLDEG-----KAYESYRTEEQLTADR 120

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +  KA     ++   E ++        +  I +   +G         PK       D+ +
Sbjct: 121 EAQKARG---EMPHYEYEYEGMTDEQKQQAIADAKAKGLKPVIRFRVPKDHDYAWDDIVK 177

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             + F S  +G D    + K DG+ TY FA  +     K    F       G DH     
Sbjct: 178 GNVSFNSDTIGGDF--VIAKRDGTPTYNFAVVVDDHMMKISHVFR------GDDHVANTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A   K      +   +  +       K+SKR    +        +G 
Sbjct: 230 KQLMIYEAFGWKAP----MFGHMSLIISADTGKKLSKRDESVLQFIEQYRNLGY 279


>gi|152978732|ref|YP_001344361.1| valyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150840455|gb|ABR74426.1| valyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 948

 Score = 53.4 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   RFDASAVEQALYRHWEQQGYFKPSYDASRPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYHRMQGDNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A + +    ++  E ++  + D+   +    I   ++ L    D          G   
Sbjct: 93  KIAAEENKTRHDYGREAFIEKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDEGLSD 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|227524312|ref|ZP_03954361.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088543|gb|EEI23855.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 893

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +     +  +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 20  DPTAIENGRYNEWLQEGVFRPSGDKKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRK 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L                        
Sbjct: 80  KRMEGYDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++        I++    L +  D         +G    +
Sbjct: 109 -REQGISRYDLGREKFVEKVWEWK-DTFAATIKEQWAKLGLSLDYERERFTLDKGLSKAV 166

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 167 RRVFVDLYNKGLIYRGEYIINWDPQARTALSD 198



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 85/239 (35%), Gaps = 40/239 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G  Y G +  PK     + D D     F S +           +D    YF  D   
Sbjct: 436 KDTGETYVG-MEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMKRYFPTDT-- 492

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+         V R+   +   + ++   +VLL  L+   RD    KM
Sbjct: 493 ----LVTGYD-IIFFW-------VSRMIFQSLEFTHRRPFKDVLLHGLI---RDSQGRKM 537

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           SK  G+ I    V+D+ G+D++R+ + +     + L F + K+              A+ 
Sbjct: 538 SKSLGNGIDPMDVIDKYGADALRWFLSVGGTPGQDLKFSYDKMDS------------AWN 585

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQ 516
               I+  ++ +  +LD        I +    D SE QL     L+     I   +   
Sbjct: 586 FINKIWNASRYVIMNLDG-------IEKPKLPDKSEWQLSDKWILSRLNTTISEVSELF 637


>gi|309776468|ref|ZP_07671454.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915859|gb|EFP61613.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 875

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 35/191 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                S +  G     +       + I     N TG +H+GH     + D ++      G
Sbjct: 16  MDHYKSWIEHGYFTAGDKSKDPFCIVI--PPPNVTGKLHLGHAWDTTLQDIVSRYKRMQG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y++            ++   ++   +  + L N           G+    +G+E      
Sbjct: 74  YDML-------WLPGMDHAGIATQAKVDERLKNE----------GISRYDIGRE------ 110

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F +  W         +     IR     + +  D          G    +R +  
Sbjct: 111 ----KFLDRAW------EWKEEYAATIRKQWAKMGLSLDYTRERFTLDEGLSEAVRKVFV 160

Query: 279 NLARQGYVYEG 289
           +L   G +Y+G
Sbjct: 161 DLYHDGLIYQG 171



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 83/242 (34%), Gaps = 44/242 (18%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G+  P         D D     F S     + +G   +   LK      YF 
Sbjct: 421 KETGEIYVGMQAPADIDN-WVQDEDVLDTWFSSALWPFSTLGWPQETADLKR-----YFP 474

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+         G+D +I+   +  +    +      +   K    +VL+  LV   RD 
Sbjct: 475 NDV------LVTGYD-IIFFWVARMA---FQTRYCMNSRPFK----DVLIHGLV---RDA 517

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ I    V+ E G D++RF +           D   + E+   +  F  +
Sbjct: 518 QGRKMSKSLGNGIDPMDVIAEHGVDALRFFLTTNSTPGQ---DLRYIDEKVAASANFINK 574

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
              A  R +  Q  +     D DL   ++I +              L  +  V+E+ T  
Sbjct: 575 IWNAS-RFVLMQIPEDMEVPDIDLSNASMIDKWI------------LKRFNEVLESVTAN 621

Query: 516 QE 517
            E
Sbjct: 622 ME 623


>gi|290968518|ref|ZP_06560057.1| glutamate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781514|gb|EFD94103.1| glutamate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 485

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 94/304 (30%), Gaps = 49/304 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  + F + +PTGP H+G  R A+    +A      G +        D          +
Sbjct: 3   KKFRVRF-APSPTGPFHIGGARSALFNYLIA---KHEGGDFIVRIEDTDRKRSTRESEEN 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +    + D  +  G   G Y +    ++  +Y+  LL   +  +        ++A
Sbjct: 59  IKEALRWLGISWDEGIDAGGSHGPYRQTERLDIYKQYTERLLAEGK-AYYCFCTPEELEA 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   D              E   + G       + +      G  Y   +  P+++T 
Sbjct: 118 QKRAQMD------------QGETPVYTGTCRDLPPETVQAYLAAGRPYVIRIKTPRNETL 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY--------FAADLAYFKCKYERGFDN 351
              D+ R  + F S  VGD     ++KSDG   Y           D+     + E     
Sbjct: 166 AFDDLVRGHVSFDSNKVGDF---VIVKSDGIPVYNYCVVLDDALMDI-THVIRAE----- 216

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFIT 409
                  +H     R   +  A+  +           V L       KMSKR G      
Sbjct: 217 -------EHLSNTPRQLVLYKALGFQAPTFAH-----VSLILGKDKKKMSKRHGATSVQQ 264

Query: 410 LRHV 413
            R +
Sbjct: 265 YRDL 268


>gi|227510169|ref|ZP_03940218.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190374|gb|EEI70441.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 893

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +     +  +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 20  DPTAIENGRYNEWLQEGVFRPSGDKKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRK 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L                        
Sbjct: 80  KRMEGYDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++        I++    L +  D         +G    +
Sbjct: 109 -REQGISRYDLGREKFVEKVWEWK-DTFAATIKEQWAKLGLSLDYERERFTLDKGLSKAV 166

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 167 RRVFVDLYNKGLIYRGEYIINWDPQARTALSD 198



 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 19/166 (11%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G  Y G +  PK     + D D     F S +           +D    YF  D   
Sbjct: 436 KDTGETYVG-MEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMKRYFPTDT-- 492

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+         V R+   +   + ++   +VLL  L+   RD    KM
Sbjct: 493 ----LVTGYD-IIFFW-------VSRMIFQSLEFTHRRPFKDVLLHGLI---RDSQGRKM 537

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQ 445
           SK  G+ I    V+D+ G+D++R+ + +     + L F + K+   
Sbjct: 538 SKSLGNGIDPMDVIDKYGADALRWFLSVGGTPGQDLKFSYDKMDSA 583


>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|125624554|ref|YP_001033037.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|281491288|ref|YP_003353268.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|124493362|emb|CAL98336.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|281375029|gb|ADA64547.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|300071348|gb|ADJ60748.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 662

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 113/333 (33%), Gaps = 47/333 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++      +++ G +I   A  +    ++ L  
Sbjct: 16  PSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQRKAEELGMTPKEYLDP 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----------DY 236
             +D+ E           +++       +  +       E+  + + K          ++
Sbjct: 76  MAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIYLGKYAGWYSVSDEEF 135

Query: 237 SVQAMMKIIRDDLKALNIQ-------HDIFISEDDFHRGDPSPIRDIIDNLARQ--GYVY 287
             +  ++ I  D ++ NI        H++   E++ +        D +     +   ++ 
Sbjct: 136 FTETQLEEIFRD-ESGNITGGIAPSGHEVEWVEEETYFFRMGKYADWLLQYYDEHPDFIQ 194

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFK 342
             +          K  ++   L   S   G     +      +  D    Y  A L Y  
Sbjct: 195 PEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFDALLNYITA-LGYNS 253

Query: 343 CKYERGFDNM---IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
              +  F      I ++G +    H+ Y      +  A+     +   +      L +DG
Sbjct: 254 DN-DSNFKKYWPGINMVGKEIVRFHTIY---WPIMLHALGLPAPKK--IFGHGWLLMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +++  G D+VR+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLIERYGLDAVRYYLMR 337


>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409428|sp|Q732H4|SYI1_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|332296159|ref|YP_004438082.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 875

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 11/103 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +IY         V R+  ++ A++ K+   NV++  LV   RD    KMSK  G+
Sbjct: 481 TGFD-IIYFW-------VARMIMMSIALTGKEPFKNVIIHGLV---RDSQGRKMSKSVGN 529

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            I    +++E G+D++RF +    N    D    K K +   N
Sbjct: 530 VIDPMDIIEESGADALRFSLASLSNPAGQDIKMSKEKVKGARN 572



 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 81/263 (30%), Gaps = 41/263 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + + +  +    Y  ++       +I     N TG +H+GH     + D +       G
Sbjct: 11  EQKVLNFWLENHIYHADVNSDKKAFSIVIPPPNVTGSLHLGHALDDTLQDIICRYKRLRG 70

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YE                    V W            LP   + G+  ++V +++  K  
Sbjct: 71  YE--------------------VLW------------LPGTDHAGIATQNVVEKMLQKKG 98

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   EK++  V ++  Q   +II   LK+L    D               ++    
Sbjct: 99  ITRHQLGREKFVEKVWEWKEQYGQRIINQ-LKSLGASCDWDRERFTMDEVLSKSVKKAFV 157

Query: 279 NLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            L   G +Y+G              +    + +    +L F      ++ D+ +  +   
Sbjct: 158 TLYNMGLIYKGTRIINWCPRCSTALADLEVEHEEKEDKLYFVRYRFFENPDQFITIATTR 217

Query: 331 YTYFAADLAYFKCKYERGFDNMI 353
                AD A      +  + ++I
Sbjct: 218 PETIFADTAVAVNPKDERYKSLI 240


>gi|261350966|ref|ZP_05976383.1| valine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860306|gb|EFC92604.1| valine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 905

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 45/217 (20%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ KK   ++++  +V    DG   KMSK  G+ I    V+++ G+D++R         
Sbjct: 525 ALTGKKPFDDIVINGMV-FGEDG--YKMSKSRGNVIAPDEVIEQYGADALRTWAANSVPG 581

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-- 490
             + FD+  +K                      R+  + F  +   +F  +V   E +  
Sbjct: 582 SDVIFDWKDIK----------------HGYRFLRKFWNAFRFISMQIFDEDVSYDEIKDN 625

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV--------FHGHWSHGREN 542
           FD  +L ++  L    +V++NA             YD A+         +H       E 
Sbjct: 626 FDPLDLWILSKLNNLNKVVDNAFAD----------YDFATTITSIEKFIWHDFCDEYIEA 675

Query: 543 PRLRFVQAN--NRKLTMMRLQLVHAVASIINSGLNII 577
            + R    +  +      +  L     ++I + L ++
Sbjct: 676 VKYRLYNDDVSDSSRKAAKYTL----RNVIETSLKLL 708


>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|255659387|ref|ZP_05404796.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848348|gb|EEX68355.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 892

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    K           +   +       ++     N TG +H+GH     + D L   
Sbjct: 16  DPQSFEKKWYEFWEKNKFFHAEVDKSKKPYSMVIPPPNVTGQLHMGHALDNTLQDILIRY 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY        + AG       ++   + + AL                        
Sbjct: 76  HRMQGYNTVWIPGCDHAG-------IATQAKVEGAL------------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K  +       EK+L  V D+  +   +I+   L++L    D          G    +
Sbjct: 105 -RKEGTNRYELGREKFLERVWDWKEKFGSRIMFQ-LRSLGSSLDWDRERFTMDEGCSRAV 162

Query: 274 RDIIDNLARQGYVYEGI 290
           R++  +L  +G +Y+G 
Sbjct: 163 REVFVSLYEKGLIYQGT 179



 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +     +     +V +  LV   RD    KMSK  G+
Sbjct: 491 TGYD-IIFFW-------VARMVMMGLEFGKDIPFHHVFIHGLV---RDSQGRKMSKSLGN 539

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
            I    V+++ G+D++RFM++        + F + +V+    
Sbjct: 540 GIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN 581


>gi|73663537|ref|YP_302318.1| glutamyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|118595560|sp|Q49V37|SYE_STAS1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|72496052|dbj|BAE19373.1| glutamyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 484

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 64/406 (15%), Positives = 131/406 (32%), Gaps = 86/406 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++   ++   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVIRIED----TDSKRNLVDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +GY  G Y +    E+ +    +LL+  +  K      +   
Sbjct: 64  ----KWLGIEWDESVDKDKGY--GPYRQSERAEIYNPLIQQLLDEDKAYKCYMTEDELEE 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     +H     E+          R   +   R+  +       PK  T
Sbjct: 118 ERQQQIERGEMPRYGGKHAHLTEEE----------RQQFEAEGRKPSIR---FRVPKDTT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGEISFDSNNMGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +      +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQLMIYETFGWEAPRFAHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 G--------------------------SDSVRFMMLWRKNSELLDFDFCKVK-------E 444
           G                           D ++     R +     FD  K+        +
Sbjct: 271 GYLPEALFNFITLLGWSPEGENEIYSKEDFIKIFDEKRLSKSPAFFDKQKLAWVNNQYMK 330

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
           Q     VF +   +     +     +   + D D   + V   + E
Sbjct: 331 QKDTETVFELALPHLIKAELL---PENPSEADLDWGRKLVSLYQKE 373


>gi|296313351|ref|ZP_06863292.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840168|gb|EFH24106.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 929

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 91/294 (30%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPDSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      K +     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQKIEEKGI--EAWFSLDKGELLSAEDCENYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|255022653|ref|ZP_05294639.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 619

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ I  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEIYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|181343219|ref|NP_001116798.1| DALR anticodon-binding domain-containing protein 3 [Danio rerio]
 gi|169158047|emb|CAQ13977.1| novel protein (zgc:153958) [Danio rerio]
          Length = 558

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 56/148 (37%), Gaps = 17/148 (11%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP--VFYVQYAYARCRSIFRQA 468
             ++  + S +VRF +L   ++  +  D  +    S + P    +V Y  AR  ++F   
Sbjct: 372 DDIIRVMTSATVRFELLSTVHTSPVTLDVQRDSGVSTKGPRGGVFVMYNCARLHTLFSSY 431

Query: 469 K-DIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY------- 519
           +  +   L  ++     +   +  +  E  L+  +L  +  +++ +    E +       
Sbjct: 432 EKGVEQGLYPEIPGGTELDFSALKEEGEWLLLFNYLIPFSEILDQSAQTLE-HEGGGARV 490

Query: 520 -----KLAFYLYDLASVFHGHWSHGREN 542
                ++  +L  L+  F  +++     
Sbjct: 491 QLRTEQVCRFLVSLSKDFSSYYNRVHVL 518


>gi|166221141|sp|A0JML8|DALD3_DANRE RecName: Full=DALR anticodon-binding domain-containing protein 3
 gi|116487596|gb|AAI25926.1| Zgc:153958 [Danio rerio]
          Length = 558

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 56/148 (37%), Gaps = 17/148 (11%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP--VFYVQYAYARCRSIFRQA 468
             ++  + S +VRF +L   ++  +  D  +    S + P    +V Y  AR  ++F   
Sbjct: 372 DDIIRVMTSATVRFELLSTVHTSPVTLDVQRDSGVSTKGPRGGVFVMYNCARLHTLFSSY 431

Query: 469 K-DIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY------- 519
           +  +   L  ++     +   +  +  E  L+  +L  +  +++ +    E +       
Sbjct: 432 EKGVEQGLYPEIPGGTELDFSALKEEGEWLLLFNYLIPFSEILDQSAQTLE-HEGGGARV 490

Query: 520 -----KLAFYLYDLASVFHGHWSHGREN 542
                ++  +L  L+  F  +++     
Sbjct: 491 QLRTEQVCRFLVSLSKDFSSYYNRVHVL 518


>gi|28378904|ref|NP_785796.1| valyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254557109|ref|YP_003063526.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|81631055|sp|Q88UX7|SYV_LACPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28271741|emb|CAD64647.1| valine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254046036|gb|ACT62829.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 889

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 66/240 (27%), Gaps = 35/240 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 14  DPTAVEAGRYQTWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 74  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V D+       II+     + +  D          G    +
Sbjct: 103 -REQGISRYDLGREKFIQQVWDWK-DEYASIIKQQWAKMGLSLDYSRERFTMDDGLSDAV 160

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           + +  +L  +G +Y G          +    D +  +      G         +D  YT+
Sbjct: 161 KKVFVDLYNKGLIYRGEYIINWDPQARTALSDIE--VIHKDDKGAFYHVKYPFADKDYTF 218


>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604270|ref|YP_002868131.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583658|sp|Q81WE4|SYI1_BACAN RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782360|sp|C3P665|SYI_BACAA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782361|sp|C3L730|SYI_BACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|110639742|ref|YP_679952.1| glutamyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966515|sp|Q11PQ4|SYE_CYTH3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|110282423|gb|ABG60609.1| glutamyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 517

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 101/291 (34%), Gaps = 41/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       L+     +  R     E YI +A A +  +
Sbjct: 13  APSPTGPLHIGGVRTALYNYLFARKMGGKMLLRIEDTDQNRFVPGAEAYIQEALAWVGIV 72

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D     G     Y +   K +  +Y+ +L+      +      + 
Sbjct: 73  I--------------DEGAGVGGPHAPYKQSERKPMYREYAEKLIAEGNAYY-----AFD 113

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKS 296
               ++ +++ LKA  +    +         +   +  D +      G  Y   L  P+ 
Sbjct: 114 TSEELEAMKERLKAAKVASPSYNMVTRMQMNNSLTLPEDEVKRRLDAGDEYVIRLKVPRK 173

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  DM R  ++  S+ +    D+ LLKSDG  TY    LA     +     ++I   
Sbjct: 174 EEIRLNDMIRGWVVVHSSTID---DKVLLKSDGMPTYH---LANIVDDHLMEITHVIR-- 225

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           G +          +   +  +          L+ L  DG   K+SKR  D 
Sbjct: 226 GEEWLPSAPLHVLLYRFLGWEDTMPQFAHLPLL-LKPDGNG-KLSKRDADA 274


>gi|22536298|ref|NP_687149.1| glutamyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|30173155|sp|Q8E284|SYE_STRA5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|22533120|gb|AAM99021.1|AE014196_17 glutamyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
          Length = 484

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 108 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|77409184|ref|ZP_00785895.1| glutamyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172192|gb|EAO75350.1| glutamyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 478

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 58  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 101

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 102 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVNESGI 159

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 160 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 213 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|76799081|ref|ZP_00781272.1| glutamyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77412169|ref|ZP_00788491.1| glutamyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|76585575|gb|EAO62142.1| glutamyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77161787|gb|EAO72776.1| glutamyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 478

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 58  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 101

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 102 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVNESGI 159

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 160 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 213 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|116747573|ref|YP_844260.1| isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696637|gb|ABK15825.1| Isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 928

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       A          +VL    V    DG   KMSK  G+ I   
Sbjct: 558 LYLEGSDQHRGWFHSSLLTAVGTRNAAPYKSVLTHGFVV---DGQGYKMSKSLGNVIAPE 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G++ +R  +      + +      +K  S+         AY R R+  R     
Sbjct: 615 EIIRQYGAEVLRLWVSAEDYRDDVRISPDILKRLSE---------AYRRIRNTCRFLLGN 665

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D D +   ++ +P +   +     L   L E+ R +  A    E +++  Y       
Sbjct: 666 LNDFDPE---KDSVPYDRMDELDRFALHQ-LQEFVRRVRQAYERFEFHRV--Y-----HA 714

Query: 532 FHGH 535
           FH +
Sbjct: 715 FHNY 718


>gi|331092376|ref|ZP_08341202.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401400|gb|EGG80986.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 882

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 52/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIETKLYEKWCENKYFHAEVDRSRKPFTIVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G   +    
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGREGFLKRT--W 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y   + +                         LK L    D          G   
Sbjct: 119 EWKEEYGGTITSQ------------------------LKKLGTSCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEEGYIYKG 172


>gi|319404436|emb|CBI78039.1| Valyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 907

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 32/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D +       G  V  +  ++ AG     +            
Sbjct: 45  PNVTGSLHMGHALNTTIQDIMVRFQRMQGKNVLWQPGMDHAGIATQMV------------ 92

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V ++LA++          EK++  V  +  +A   II + L
Sbjct: 93  -------------------VERQLAERRELTRQEMGREKFIECVWKWRHEAG-GIITNQL 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           K L +  D          G    +R++   L +QG +Y+ 
Sbjct: 133 KRLGVSCDWSRERFTMDEGLSQAVREVFVKLYKQGLIYKD 172


>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|323339480|ref|ZP_08079759.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093094|gb|EFZ35687.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 887

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +        V+   +  +   K    +I     N TG +H+GH     + D L   
Sbjct: 12  DPSQVEPGRYEQWVNDGLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGFDTL-------WLPGMDHAGIATQAKVEARLAE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                II+     L +  D          G    +
Sbjct: 114 --KFVDKVWEWKDE-------------YASIIKQQWAKLGLSLDYDRERFTLDEGLSKAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L ++G +Y G          +    D
Sbjct: 159 RKVFVSLYKKGLIYRGEYIINWDPKARTALSD 190



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 126/380 (33%), Gaps = 77/380 (20%)

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199
             R A+V D     +   GY +  E  ++  G       + V  R     +     L E 
Sbjct: 326 EARKAIVSD-----LQDQGYMINIEPIVHSVG-HSERTGVQVEARLSTQWFVKMKPLAEA 379

Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
                 LK+   + A K+  E       +W+  V D+ +   +         +   ++  
Sbjct: 380 A-----LKNQETDDAVKFVPERFEKTFTQWMENVHDWVISRQLWWGHQ----IPAWYNKK 430

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
             E   + G+ +P  + I+N  +   V +                    L   STM   D
Sbjct: 431 TGET--YVGEEAP--EDIENWEQDTDVLDTWFS--------------SALWPFSTMGWPD 472

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            +    K      YF  D          G+D +I+   S        +         +  
Sbjct: 473 TESEDFKR-----YFPTDT------LVTGYD-IIFFWVSR------MIFQSLEFTGRRPF 514

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFD 438
           + +VLL  L+   RD    KMSK  G+ I    V+D+ G+D++R+ +       + + F 
Sbjct: 515 K-HVLLHGLI---RDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSTGSTPGQDVRFS 570

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + K+              A+     I+  ++ +  +LD D        +    + SE QL
Sbjct: 571 YTKMDA------------AWNFINKIWNASRFVIMNLDDD-------TKAELPEKSEWQL 611

Query: 499 IVH--LAEYPRVIENATIAQ 516
                L+   + ++      
Sbjct: 612 SDKWILSRLNKTVKEVARLF 631


>gi|255505903|ref|ZP_05348810.3| methionine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265208|gb|EET58413.1| methionine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 661

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 132/429 (30%), Gaps = 60/429 (13%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
              +  I +  K  +    A  +G  H+G+    ++ D +A      GY+V  +   ++ 
Sbjct: 2   RKEKGDIMEKKKFYMTTAIAYTSGKPHIGNTYEIILADAIARFKRAQGYDVFFQTGTDEH 61

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G +I   A       ++ +     ++         +  +     DK+     ++ E++  
Sbjct: 62  GQKIELKAAEAGVTPKEYVDKVAGEVK-------RIWDLVNASYDKFIRTTDDYHEKQVQ 114

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPI 273
            I K    Q    I +   + +     + F +E     G                    +
Sbjct: 115 KIFKKLYEQG--DIYKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEEAYFFRM 172

Query: 274 RDIIDNLARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRP 323
               D L      +   + P   K            Q   + R    +   +  DD    
Sbjct: 173 SKYADRLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVV 232

Query: 324 LLKSDGSYTYFAADLAY-----FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVS 375
            +  D    Y    + Y        ++++ +   ++++G D    + R   +      ++
Sbjct: 233 YVWLDALTNYITG-IGYDCDGESTEQFKKNWPADLHLIGKD----IIRFHTIYWPIFLMA 287

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SEL 434
                   +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L        
Sbjct: 288 LDLPLPKQVFGHPWLLQGDG---KMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFDND 344

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQ 487
               +  + E+   +    +     R  S+  +        K +   +D +L    +   
Sbjct: 345 GVITWELLVERLNSDLANTLGNLVNRTISMSNKYFGGVVADKGVTEPVDAELEAVALETP 404

Query: 488 ESEFDTSEL 496
           +   +  E 
Sbjct: 405 KKVTEKMEK 413


>gi|227522452|ref|ZP_03952501.1| glutamate--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227090404|gb|EEI25716.1| glutamate--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 496

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 96/294 (32%), Gaps = 28/294 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A      G  + R   I D   + N            +
Sbjct: 11  APSPTGHLHIGNARTAIFNYLFAR--HNKGKFIIR---IEDTDTKRNVADGEKSQLENLK 65

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  +  + P+ G   G Y +    ++      +LL+          + Y  +  +   R
Sbjct: 66  WLGLDWDEGPDVGGDFGPYRQSERNDIYKPLLQQLLDEG-----KAYESYRTEEQLTADR 120

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +  KA     ++   E ++        +  I +   +G         PK       D+ +
Sbjct: 121 EAQKARG---EMPHYEYEYEGMTDEQKQQAIADAKAKGLKPVIRFRVPKDHDYAWDDIVK 177

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             + F S  +G D    + K DG+ TY FA  +     +    F       G DH     
Sbjct: 178 GNVSFNSDTIGGDF--VIAKRDGTPTYNFAVVVDDHMMRISHVFR------GDDHVANTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A   K      +   +  +       K+SKR    +        +G 
Sbjct: 230 KQLMIYEAFGWKAP----MFGHMSLIISADTGKKLSKRDESVLQFIEQYRNLGY 279


>gi|259047289|ref|ZP_05737690.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036065|gb|EEW37320.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 880

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 68/239 (28%), Gaps = 35/239 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +        V    +  N        +I     N TG +H+GH     + D + 
Sbjct: 8   KFQPQEVEAGKYQWWVDSGVFHPNEDPNAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++             ++   ++   + ++ L             G+    +G+
Sbjct: 68  RQKRMQGFDTL-------WLPGMDHAGIATQAKVEEKLRGE----------GLSRYDLGR 110

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E           F E+ W         +     IR+    + I  D          G   
Sbjct: 111 E----------KFLEQTWK------WKEEYASHIREQWAKMGISVDYRRERFTLDNGLSD 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            ++ +   L  +G +Y G          +    D + +          ++ PL  +DGS
Sbjct: 155 AVKKVFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIHKDVEGAFYHMNYPL--ADGS 211


>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|81395073|sp|Q6HER9|SYI1_BACHK RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|325137586|gb|EGC60167.1| isoleucyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 929

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 91/294 (30%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      K +     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKGELLSAEDCEHYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|304439719|ref|ZP_07399618.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371794|gb|EFM25401.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 896

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 53/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P      L    + G  +   +        I     N TG +H+GH     + D L 
Sbjct: 23  TYDPKSFEDRLYDFWMKGGYFTPEIDKNKKPFTIMMPPPNVTGNLHMGHALNNTLQDILI 82

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                    S  W            +P   +  +  +    
Sbjct: 83  RTKRMQGY--------------------SALW------------VPGTDHASISTEAKVV 110

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   K          E +L    D++ +     I++ LK L +  D              
Sbjct: 111 EKMKKEGKTKEMIGREGFLEEAWDWTHKYG-GNIKNQLKKLGVSCDWTRDSFTLDEHLSK 169

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +G +Y G
Sbjct: 170 AVEEVFIRLYEKGLIYRG 187



 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 50/248 (20%)

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
             Y +     + ++++   +N     WL  ++D+ +   +         L + +     E
Sbjct: 390 EAYKRGEVNFIPERFAKVYVN-----WLENIRDWCISRQLWWG----HRLPVYYVEETGE 440

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
               R DPS        L  +   Y+G+       T          L   ST+   D   
Sbjct: 441 TIVSRTDPS--------LDEK---YKGLTIKHDEDTLDTWFSS--ALWPFSTLGWPDK-- 485

Query: 323 PLLKSDGSYTYFAADLAYF--KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
                        ADL YF        G+D +I+   S        + +    + E   +
Sbjct: 486 ------------TADLDYFFPTDVLITGYD-IIFFWVSR------MIFSSLEQMGEVPFK 526

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDF 439
            +VL   LV    D    KMSK  G+ I    V+D+ G+D++RF ++   +    + F +
Sbjct: 527 -DVLFTGLVN---DAQGRKMSKSLGNGIDPLEVIDKYGADALRFTLVTGNSPGNDMRFYY 582

Query: 440 CKVKEQSK 447
            +V+    
Sbjct: 583 ERVEANRN 590


>gi|209522637|ref|ZP_03271195.1| valyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496686|gb|EDZ96983.1| valyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 908

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 55/220 (25%), Gaps = 37/220 (16%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+P Y                  +  +    G    I     N TG +H+GH     + 
Sbjct: 7   TLAPQYDPFSTEAKWQQYWEQKQVFKADPNHPGEPYCIMIPPPNVTGSLHMGHAFNNSLI 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY                             LY   +D        +  +
Sbjct: 67  DALIRYHRMRGYNT---------------------------LYLPGTDHASIAVQTILER 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +E   +Y      F +  W         Q     I + L+ L +  D          
Sbjct: 100 QLREEGKTRYDLGRDKFLDRAWQ------WKQESGGTIVNQLRRLGVSCDWTRERFTLDE 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G    + +    L   G +Y G         ++    D +
Sbjct: 154 GLSKAVIEAFVRLYEDGLIYRGEYLVNWCPASESAVSDLE 193



 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 99/308 (32%), Gaps = 37/308 (12%)

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           NF  ++W  + +D+ V+     I   L     Q   + +  +           ++   A 
Sbjct: 386 NFVPQRWQKVYRDWLVKLEDWCISRQLW-WGHQIPAWYAVSETGGEITDHTPFLVARTAA 444

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +    E  +         + D D     F S +          K+    TY      Y  
Sbjct: 445 E--AQEKAIASFGEGVKLQQDPDVLDTWFSSGLWPFSTLGWPEKTPDLQTY------YPT 496

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                GFD +I+   +           +       +     +    + L  +G   KMSK
Sbjct: 497 NTLSTGFD-IIFFWVAR--------MTMMGGYFTDQMPFQTVYIHGLILDENGK--KMSK 545

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            AG+ I    ++D+ G+D++R+ ++        D      + + +      V+ +     
Sbjct: 546 SAGNGIDPLLLIDKYGTDALRYTLMREVIGAGQDIRLEYDRSKDES---PSVEASRNFTN 602

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
            ++  A+ +  +L      +   P   E + S+  +   L+ + + ++            
Sbjct: 603 KLWNAARFVLMNLKGQTPAQLGTPNLEELELSDRWI---LSRFNQTVKQT---------C 650

Query: 523 FY--LYDL 528
            Y   Y L
Sbjct: 651 DYMNAYSL 658


>gi|312373201|gb|EFR20993.1| hypothetical protein AND_17793 [Anopheles darlingi]
          Length = 420

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 18/169 (10%)

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIF 472
           +  +G  +    +L  K+S  +D                 ++ Y YAR  ++F + + + 
Sbjct: 243 IASLGRSAAIVDVLQAKHSSAIDMRRGLASSTISSCKGASFILYNYARLAALFEKYETMR 302

Query: 473 PDLDFDLFPRNVIPQE--SEFDTSELQLIVH-LAEYPRVIENAT-----IAQEPYKLAFY 524
               +   P  V   +     +  E QL+   +  +P  +             P++L  +
Sbjct: 303 QTQGYPELPSTVEGLDFTLLTEPDEWQLLFVYVMGFPTALRQTLGDGMLERMAPHRLLEF 362

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASII 570
            + L S    ++       + R +  N  KL    ++RL L+ +V   +
Sbjct: 363 TFGLVSCLSKYY------RQTRILTENRPKLVPTMLVRLCLLRSVYHTL 405


>gi|118475858|ref|YP_893009.1| glutamyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118415083|gb|ABK83502.1| glutamate--tRNA(Gln) ligase [Bacillus thuringiensis str. Al Hakam]
          Length = 496

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 21  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 61

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 62  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 107

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 108 EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 168 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 221

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 222 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 274

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 275 IEQYKELGY 283


>gi|304315621|ref|YP_003850766.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777123|gb|ADL67682.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 636

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 113/337 (33%), Gaps = 63/337 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V            +         +  Q    
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDV------------MFLTGTDEHGQKIQRKAK 61

Query: 192 NDSDLPEGYYPGVY--LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRD 247
                P+ Y   +   +K +  +  D  + + +   +++   IV+    +   K  I + 
Sbjct: 62  EKGVTPKQYVDEIVAWIKDL-WKTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKS 120

Query: 248 DLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + +       + F +E     G+       ++ +  + Y ++      K     +   D 
Sbjct: 121 EYEGWYCTPCETFWTEKQLVDGNCPDCGRPVELVKEESYFFKLSNYADKLLKYYEEHPDF 180

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM---- 356
            Q   R   +        +KS         DL   +  ++ G    FD  +++YV     
Sbjct: 181 IQPESRLNEM-----VSFIKSG------LEDLCVSRTSFDWGVKVPFDPKHVVYVWIDAL 229

Query: 357 ---------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG----------- 395
                     +DH    K+   A    V ++  + + ++   + +  D            
Sbjct: 230 SNYITALGYSTDHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGW 289

Query: 396 ---MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                 KMSK  G+ +  + +V + G D++R+ +L  
Sbjct: 290 LILDGGKMSKSKGNVVDPKELVSKYGVDAIRYFLLRE 326


>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|254782362|sp|B7JJY2|SYI_BACC0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|228476230|ref|ZP_04060933.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269715|gb|EEK11214.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 658

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMIAGIKRLWAKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +             +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKI---AGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNINKY---TDRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|114705894|ref|ZP_01438797.1| glutamyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538740|gb|EAU41861.1| glutamyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 474

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 116/353 (32%), Gaps = 75/353 (21%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTL 177
            +   + +PTG +H+G  R A+     A       L+     +  R          ++ +
Sbjct: 5   VVTRFAPSPTGFLHIGGARTALFNWLYARAKGGRMLLRIEDTDRERSTP-----EAVDAI 59

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              + W   +A    D +    +  G   + V +EL  K       +  ++ L  +++ +
Sbjct: 60  IEGLKWMGLEA----DGEPVSQFANGDRHRAVVEELLAK-GQAYKCYASQEELAEMREKA 114

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                    D         D   SE       PS +  +I             L  P   
Sbjct: 115 KAEKRAPRYD-----GRWRDRDPSEA------PSGVDPVI------------RLKAPLDG 151

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D  + ++ F +  + D     LL+SDGS TY    LA     ++ G  ++I   G
Sbjct: 152 ETIVDDQVQGRVRFNNKELDDF---VLLRSDGSPTYM---LAVVVDDHDMGVTHIIR--G 203

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------- 407
            DH     R   +  A+        V +   + L       K+SKR G            
Sbjct: 204 DDHLTNGARQALIYKAMGWD-----VPVMAHIPLIHGPDGAKLSKRHGALGIEAYRAMGY 258

Query: 408 --ITLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
             + LR+ +  +G            D + +  +   N     FDF K++  + 
Sbjct: 259 LPVALRNYLVRLGWAHGDDEIISTEDMIAWFDVSEINKGAARFDFKKLEALNG 311


>gi|194335613|ref|YP_002017407.1| glutamyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693382|sp|B4SCV6|SYE_PELPB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|194308090|gb|ACF42790.1| glutamyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 502

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 113/304 (37%), Gaps = 36/304 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-------GAQINTLALSV 181
           + +PTG +HVG  R A+     A      G  + R   I D        GAQ   L  ++
Sbjct: 11  APSPTGYLHVGGLRTALYNYLFAK--KMHGDFIIR---IEDTDQTRKVEGAQ-QNLIKAL 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W     +  ++S    G Y G Y++    +L  +Y  +LL+     +     +   +  
Sbjct: 65  EWA---GIVADESPEKGGNY-GPYVQSERLDLYGRYCQQLLDDQHAYYCFATHEELEENR 120

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              I+  L+     +  ++ E+      PS IR  +D     G  Y   +  P   +   
Sbjct: 121 QLQIKQGLQ--PKYNRKWLPEEMGGSMPPSVIRKKLDE----GGPYVIRMKVPDYVSVWF 174

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R  + F S  +    D+ L+KSDG  TY     A     +   F ++I   G +  
Sbjct: 175 EDIIRGPVEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLMEFTHIIR--GEEWL 226

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             + +   +      +  ++       + L  +    K+SKR GD     ++     +D+
Sbjct: 227 SSMPKHLLLYEFFGWEPPKVAH-----LPLLLNADRSKLSKRQGDVAVEDYIRKGYSNDA 281

Query: 422 VRFM 425
           +   
Sbjct: 282 IINF 285


>gi|242279474|ref|YP_002991603.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511501|sp|C6BV89|SYI_DESAD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|242122368|gb|ACS80064.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 937

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 120/343 (34%), Gaps = 43/343 (12%)

Query: 208 HVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISE 262
            +G E  D     L    ++ +WLP   +  + +M++   D      +   +     I E
Sbjct: 424 FIGMEENDLRKKALKAIKDDVEWLPAWGENRIYSMVENRPDWCISRQRNWGVPIIALICE 483

Query: 263 D-DFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D D    DP  +  ++D   +      Y +E  +     +   KC         +   + 
Sbjct: 484 DCDEVYNDPEWVFSVVDEFEKHERGCDYWFEKSIEEIVPEGL-KCPKCGGNHWTKEDDIL 542

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSE 376
           D      +  D   ++     A  + + E  F   +Y+ GSD   G+       +    +
Sbjct: 543 D------VWFDSGTSFA----AVVEKRKEHRFPADLYLEGSDQHRGWFHSSLLASVGTRD 592

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
                 VL    V    D    KMSK  G+ I  + ++D+ G++ +R  +      E + 
Sbjct: 593 VPPYKTVLTHGYVV---DKDGRKMSKSIGNVIAPQEIIDQHGAEILRMWVSAVNYQEDVR 649

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++  +  +      +     CR I        P+ D  + P +++P +       L
Sbjct: 650 IS-DEILSRMVDTY----RRVRNTCRYILGNLDGFNPETDA-VAPADMLPIDHF----AL 699

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLASV-FHGHW 536
            L+        VI+ A    E +K+  Y  L++L +      +
Sbjct: 700 DLV---NRQHEVIQKAYTNFEFHKV--YHTLHNLCTTELSAFY 737


>gi|158253866|gb|AAI54253.1| Zgc:153958 [Danio rerio]
          Length = 558

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 56/146 (38%), Gaps = 17/146 (11%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP--VFYVQYAYARCRSIFRQA 468
             ++  + S +VRF +L   ++  +  D  +    S + P    +V Y  AR  ++F   
Sbjct: 372 DDIIRVMTSATVRFELLSTVHTSPVTLDVQRDSGVSTKGPRGGVFVMYNCARLHTLFSSY 431

Query: 469 K-DIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY------- 519
           +  +   L  ++     +   +  +  E  L+  +L  +  +++ +    E +       
Sbjct: 432 EKGVEQGLYPEIPGGTELDFSALKEEGEWLLLFNYLIPFSEILDQSAQTLE-HEAGGARV 490

Query: 520 -----KLAFYLYDLASVFHGHWSHGR 540
                ++  +L  L+  F  +++   
Sbjct: 491 QLRTEQVCRFLVSLSKDFSSYYNRVH 516


>gi|65317548|ref|ZP_00390507.1| COG0008: Glutamyl- and glutaminyl-tRNA synthetases [Bacillus
           anthracis str. A2012]
 gi|167635036|ref|ZP_02393353.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170689563|ref|ZP_02880749.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707511|ref|ZP_02897964.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655587|ref|ZP_02936968.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568985|ref|ZP_03021886.1| glutamyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196041793|ref|ZP_03109083.1| glutamate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|206978368|ref|ZP_03239241.1| glutamyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|225862140|ref|YP_002747518.1| glutamyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227812761|ref|YP_002812770.1| glutamyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228912827|ref|ZP_04076474.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228931590|ref|ZP_04094496.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228983343|ref|ZP_04143556.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229089219|ref|ZP_04220500.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229119750|ref|ZP_04249011.1| Glutamyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229136934|ref|ZP_04265561.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229153866|ref|ZP_04281996.1| Glutamyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|229182482|ref|ZP_04309733.1| Glutamyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229602002|ref|YP_002864739.1| glutamate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|167529510|gb|EDR92260.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127507|gb|EDS96381.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666476|gb|EDT17253.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080051|gb|EDT65149.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559909|gb|EDV13893.1| glutamyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196027413|gb|EDX66030.1| glutamate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|206743429|gb|EDZ54863.1| glutamyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|225786879|gb|ACO27096.1| glutamate--tRNA ligase [Bacillus cereus 03BB102]
 gi|227003441|gb|ACP13184.1| glutamate--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228600937|gb|EEK58506.1| Glutamyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228629547|gb|EEK86244.1| Glutamyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228646472|gb|EEL02679.1| Glutamyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228663651|gb|EEL19230.1| Glutamyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228694058|gb|EEL47740.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228776333|gb|EEM24686.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228828018|gb|EEM73746.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228846763|gb|EEM91768.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266410|gb|ACQ48047.1| glutamate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 491

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|314937303|ref|ZP_07844645.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654599|gb|EFS18349.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 659

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 16  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 68  TELEYLDEMIAGIKRLWAKLEIS---NDDFIRTTEERHKQVVEKV------------FER 112

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +             +   +  +
Sbjct: 113 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKI---AGGKSPDSGHEVELVKEE 169

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 170 SYFFNINKY---TDRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 226

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 227 VPSNPKHVVYVWIDALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILL 286

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 287 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 339


>gi|293401447|ref|ZP_06645590.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305085|gb|EFE46331.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 874

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 57/191 (29%), Gaps = 35/191 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           ++   + V  G     +       + I     N TG +H+GH     + D +A      G
Sbjct: 16  QEHYKTWVEQGYFTAGDKTKDPFCIVI--PPPNVTGKLHLGHAWDTTLQDIVARYKRLQG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y++            ++   ++   +  + L             G+    +G+E      
Sbjct: 74  YDML-------WLPGMDHAGIATQAKVDERLKGE----------GISRYDIGRE------ 110

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F +  W         +     IR     + +  D          G    +R +  
Sbjct: 111 ----KFLDRAW------DWKEEYASTIRKQWAKMGLSLDYTRERFTLDDGLSHAVRKVFV 160

Query: 279 NLARQGYVYEG 289
           +L   G +Y+G
Sbjct: 161 DLYNDGLIYQG 171



 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 102/299 (34%), Gaps = 43/299 (14%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
                +Y G +  P+ +   K D D     F S +           +D    YF  DL  
Sbjct: 421 KETNEIYVG-MEDPQDQENWKQDEDVLDTWFSSALWPFSTLGWPENTDDLARYFPNDL-- 477

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   +  +    +          K    +VL+  LV   RD    KM
Sbjct: 478 ----LVTGYD-IIFFWVARMA---FQTRYCMKNRPFK----DVLIHGLV---RDPQGRKM 522

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ I    V+D  G D++RF +         D  +   K ++  N  F  +   A 
Sbjct: 523 SKSLGNGIDPMDVIDHFGVDALRFFLTTNSTPGQ-DLRYSDEKVEASWN--FINKIWNAS 579

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R    Q  D F   D D+   ++I +              L  +  V+ N T   E   
Sbjct: 580 -RFALMQLGDAFHLEDIDVSNASMIDKWI------------LKRFNEVLGNVTENME--- 623

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579
              Y + L    +  ++   ++    +++ +   L      +V A  S +   L   G+
Sbjct: 624 --KYEFALVG--NELYNFVWDDFCSWYIELSKAGLQSADATVVTAARSTLVIVLR--GI 676


>gi|254564061|ref|YP_003071156.1| valine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254271339|emb|CAX27351.1| valine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 949

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 69/243 (28%), Gaps = 34/243 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +S+    G  +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFDPAAVEARVSAAWEEGQAFRAGRPERAGAEPFSIVIPPPNVTGSLHMGHALNNTIQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 65  LVRFERMRGKDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L ++          E++L  V  +  ++   II   LK L    D          G 
Sbjct: 94  ERKLMERQQPGRRELGREEFLRRVWAWKEESGGTIIGQ-LKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +     +L  QG +Y            Q    D +             D P++   G
Sbjct: 153 SRAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPVVDEAG 212

Query: 330 SYT 332
           + T
Sbjct: 213 TPT 215



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +   ++++     V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 558 WVARMMMMGLHLTDQAPFETVYLHTLV---RDEKGAKMSKSKGNVVDPVDLIDRFGADAL 614

Query: 423 RFMM 426
           RF +
Sbjct: 615 RFTL 618


>gi|320546286|ref|ZP_08040606.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449063|gb|EFW89786.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 883

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVQLYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPNDDRYKDLI 243


>gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 921

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RNDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D          I +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTV-AIAELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|289422845|ref|ZP_06424678.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156755|gb|EFD05387.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 647

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 61/433 (14%), Positives = 139/433 (32%), Gaps = 81/433 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    +  D +A    F GY+V      ++ G +I   A        + L  
Sbjct: 16  PSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQKKAQEAGMSEIEFLDA 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY---SVQAMMKIIRDD 248
             +D+ +             E  +  + + +   +++   ++       +     I +  
Sbjct: 76  QIADIKKL-----------WEKLEISNDDFIRTTDKERHEVIIQKIFTKLYEQGDIYKGS 124

Query: 249 LKALN-IQHDIFISEDDFHRG----DPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQK 301
            +    +  + F +E     G    D      I+   +    +  Y+  +      T   
Sbjct: 125 YEGNYCVPCESFWTESQMIDGHKCPDCGRETKIVKEESYFFRLSKYQDRIRDLFENTDFV 184

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM----- 356
               RK  + ++ +     D  + ++   +          K  ++   D++IYV      
Sbjct: 185 LPESRKNEMIKNFIDPGLEDLSVTRTSFDWG--------IKVPFDE--DHVIYVWIDALC 234

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG------------ 395
                      D S +     A    V+++  + + ++   + +  D             
Sbjct: 235 NYITSLGYMSEDDSKFKNYWPANVQLVAKEIVRFHTIIWPALLMALDLPLPQRVFGHGWI 294

Query: 396 --MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
                KMSK  G+ +    +VD+ G D++++ +L        +F F +    +  N +  
Sbjct: 295 LFADDKMSKSKGNIVYPGQMVDKYGVDALKYFLLR-------EFSFGQDGSYTHRNFITR 347

Query: 454 V--QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL--------- 502
           +    A      + R    +    D  L    V   ++EFD   + L   +         
Sbjct: 348 INSDLANDLGNLVSRTVSMVEKYNDGILV---VNDAKTEFDDELINLYKEIRVDFEKQMN 404

Query: 503 -AEYPRVIENATI 514
              +   +E+   
Sbjct: 405 DLMFHEALESVWR 417


>gi|26344329|dbj|BAC24990.1| unnamed protein product [Mus musculus]
          Length = 167

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 30/149 (20%)

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI-- 509
           +V Y  AR  ++F   K       +  FP  + +      D  E  L+     +  V+  
Sbjct: 27  FVMYNCARLATLFEGYKHGTEQGLYPTFPLVSSLDFSLLHDEGEWLLL-----FNSVLPF 81

Query: 510 -----ENATIAQEP--YK------LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL- 555
                +  ++A  P  +       +  +L  L+  F  +++      R+  +      L 
Sbjct: 82  LDLLSQTVSLAGTPGLHIPVRTEMVCKFLVQLSMDFSSYYN------RVHILGEPRPHLF 135

Query: 556 --TMMRLQLVHAVASIINSGLNIIGVESP 582
                RLQL+ AV  + ++GL ++G+   
Sbjct: 136 GQMFARLQLLGAVREVFHTGLAMLGLPPL 164


>gi|70726264|ref|YP_253178.1| valyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|90108438|sp|Q4L703|SYV_STAHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68446988|dbj|BAE04572.1| valine-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 876

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        V    +  +         I     N TG +H+GH     + D +  +
Sbjct: 8   NPREVEAGRYEEWVKNDYFKPSEDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   +    L             G+    +G+E 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVDAKLKE----------QGISRHDIGREK 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +++                    +     IR     L +  D          G    +
Sbjct: 111 FLEHAWSWK----------------EEYASFIRQQWAKLGLGLDYSRERFTLDDGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 155 RKVFVDLYNKGIIYRGERIINWDPEARTALSD 186



 Score = 38.4 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 85/238 (35%), Gaps = 31/238 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLA 339
              G +Y G    PK       D D     F S +     +  P + +D    Y      
Sbjct: 419 KETGEIYVGE-EAPKDIDNWVQDEDVLDTWFSSALWPFSTLGWPNIDADDFKRY------ 471

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +I+         V R+       ++++   +VLL  LVR   DG   K
Sbjct: 472 YPTNALVTGYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--K 520

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +    V++E G+DS+R+ +    +    D  +   K +S  N          
Sbjct: 521 MSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGH-DLRYSTEKVESVWN---------- 569

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               I+  A+    ++  D F    I        ++  ++  L E    + N +   E
Sbjct: 570 FINKIWNGARFSLMNI-GDEFKFEDIDLTGNLSLADKWILTRLNETIETVTNLSEKYE 626


>gi|218767582|ref|YP_002342094.1| isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543093|sp|Q9JVY4|SYI_NEIMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121051590|emb|CAM07888.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 929

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 110/366 (30%), Gaps = 54/366 (14%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      K +     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKGELLSAEDCEHYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----LKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 +Y R R+          D +  +          E D   L L   L       E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQ------E 700

Query: 511 NATIAQEPYKLAFYLYDLA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                  P     Y +  A               +    ++ RL   +A++R     +  
Sbjct: 701 RVAGDFYP----RYAFHFAVKEMVSFCSEDLGAFYLDILKD-RLYTTKADSRARRSAQTA 755

Query: 562 LVHAVA 567
           L H   
Sbjct: 756 LYHITR 761


>gi|293376478|ref|ZP_06622707.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842048|ref|ZP_08167585.1| valine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644900|gb|EFF62981.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489770|gb|EGC92126.1| valine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 878

 Score = 53.0 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 54/203 (26%), Gaps = 33/203 (16%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +       +         K  I     N TG +H+GH     + D +  +    GY+  
Sbjct: 19  YAFWYEQDCFKAEPQSNKPKYTIVIPPPNVTGKLHLGHAWDTSLQDIIIRMKRMQGYDAL 78

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
                      ++   ++   +    L             G+    +G+E          
Sbjct: 79  -------WLPGMDHAGIATQAKVDARLKE----------QGLSRYDIGRE---------- 111

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            F E+ W         +     IR   + + +  D          G    +R +   L  
Sbjct: 112 AFLEKAW------EWKEEYAGFIRQQWEKMGLSLDYSRERFTLDEGLSKAVRRVFVQLYE 165

Query: 283 QGYVYEGILPPPKSKTTQKCDMD 305
           +G +Y G          +    D
Sbjct: 166 KGLIYRGERIINWDPAARTALSD 188



 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 94/303 (31%), Gaps = 47/303 (15%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G   P   +     D D     F S +                T    D+  
Sbjct: 421 KETGEMYVGEEAPADIEN-WNQDEDVLDTWFSSALWPF------------TTLGWPDVEC 467

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPI 398
              K     D +  V G D   +      +  ++     +   NVL+  LV   RD    
Sbjct: 468 EDFKAYFPTDTL--VTGYD-IIFFWVSRMIFQSLEFTDERPFKNVLIHGLV---RDAEGR 521

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +    V+++ G+DS+R+ +           D   ++E+ +    F  +   
Sbjct: 522 KMSKSLGNGVDPMDVIEKYGADSLRYFLTTNSAPGQ---DLRYIEEKVESTWNFINKIWN 578

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIA 515
           A    I         D+       NV  +              L      IE        
Sbjct: 579 ASRFVIMNLEGMTVEDVCLQAATLNVADKWI------------LGRLNETIEAINYNADK 626

Query: 516 QEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            E  ++  +LY+ +   F   +    E  +L     +       R+ L +    ++ S +
Sbjct: 627 FEFGEVGRHLYNFIWEDFCNWY---IEMAKLPLQGEDEEAKRSTRMVLTY----VLESIV 679

Query: 575 NII 577
            ++
Sbjct: 680 KLL 682


>gi|85859788|ref|YP_461990.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722879|gb|ABC77822.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 887

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 30/220 (13%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +   + +     +V L  LV   RD    KMSK  G+ I    ++D+ G+D+ 
Sbjct: 493 WVARMMMMGKYIMKDVPFRDVYLHALV---RDEKGEKMSKSKGNSIDPLDMIDKYGTDAF 549

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF +              ++ E+  E   F+V     +  +  R +     D   +    
Sbjct: 550 RFTLAAFSAQGRD----VRMSEERIEGYKFFV----NKIWNAARFSLMNLEDYPAEGAAA 601

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
                  E    +  ++  L      +  +         A      A+V+   W    + 
Sbjct: 602 GR----EEKSLKDRWILSRLQRTTAEVVRSLDEYRFNDAA------AAVYSFFWHEFCDW 651

Query: 543 PRLRFV-----QANNRKLTMMRLQLVHAVASIINSGLNII 577
                      +    +    +L L      ++ +GL ++
Sbjct: 652 YLELIKPTLYGKETPEERMAAQLTL----KEVLKNGLKLL 687



 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 37/201 (18%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L+ +Y    +        V    +     G+    +I     N TG +H+GH     + D
Sbjct: 6   LNKAYEPHEVEARWYQYWVDSGFFHAEDAGEKPPFSIVIPPPNVTGILHMGHALNNTLQD 65

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +       GY       ++ AG                                V  K 
Sbjct: 66  IIVRFKRMQGYNTLWMPGMDHAGI---------------------------ATQNVVEKE 98

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + +E   ++     +   EK++  V ++  +    II   LK L    D          G
Sbjct: 99  LAREGLTRH-----DLGREKFIERVWEWKAKYGGVIINQ-LKRLGCSCDWERQRFTMDEG 152

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               +R++   L +   +Y+G
Sbjct: 153 LSRAVREVFVRLYQDDLIYQG 173


>gi|33151851|ref|NP_873204.1| valyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423707|sp|Q7VN93|SYV_HAEDU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33148072|gb|AAP95593.1| valyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 961

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFDASAVEQALYQHWEEQGYFKPSENPAVPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWQRERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  QG +Y G               D +
Sbjct: 158 AVKEVFVRLHEQGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|75760636|ref|ZP_00740665.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218895223|ref|YP_002443634.1| glutamyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228898841|ref|ZP_04063123.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228905885|ref|ZP_04069782.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|74491879|gb|EAO55066.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218544958|gb|ACK97352.1| glutamyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228853700|gb|EEM98460.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228860741|gb|EEN05119.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 491

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 96/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    E  D Y    L+  E                  + 
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQ---TERLDIYKKLYLDLLERGLAYKC----------YMT 117

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +  I   E   + G+      + +     +G +       P  +     D+ 
Sbjct: 118 EEELEAEREGQISRGETPRYAGNHRDLTEEQMKEFEAEGRIPSIRFRVPADRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|324324077|gb|ADY19337.1| glutamyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 485

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 50

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 51  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 96

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 97  EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 156

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 157 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 210

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 211 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 263

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 264 IEQYKELGY 272


>gi|217077950|ref|YP_002335668.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037805|gb|ACJ76327.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 864

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K     +  G    +     G K +I     N TG +H+GH     + D L      +G+
Sbjct: 17  KWYKFWLEKGYFTPKKD---GPKYSIVIPPPNITGKIHMGHALNITLQDILVRFKRMNGF 73

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +                            L+    D           K +     +K   
Sbjct: 74  KT---------------------------LWVPGEDHAGIATQTAVEKAI-----EKEGK 101

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           +      EK+L IV D++       I++ + A+    D          G    ++ +  +
Sbjct: 102 KREELGREKFLEIVWDWA-NTYRNTIKNQIMAIGASVDWTRERFTLDEGLSKAVKKVFVS 160

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L ++G +Y+G          +    D +
Sbjct: 161 LYKKGLIYKGKYIVNWCPRCKTVLSDEE 188



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 90/240 (37%), Gaps = 54/240 (22%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +      KK   +V + +LV   RD    KMSK  G+
Sbjct: 482 TGFD-IIFFW-------VARMVMMGYEFMGKKPFNDVYIHQLV---RDKFGRKMSKSLGN 530

Query: 407 FITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    V+ E G+D +RF + L       +  D   +    K                  
Sbjct: 531 GIDPLEVIQEYGADPMRFTLALLAAQGRDIKLDIKNIDTSKK----------------FA 574

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            +  +    +  +L     IP E+  + S+  ++  L +  + + NA    E        
Sbjct: 575 NKIWNATRFIIMNLEDYKEIPLEN-LNLSDKWILSRLQKTIKNVTNAIEQYE-------- 625

Query: 526 YDLAS--VFHGHWSHGRENPRLRFVQANNRKLTMMRLQ-----LVHAVA-SIINSGLNII 577
           ++LA+  +++  W    +            +++  RL+     LV  V  +++++ L ++
Sbjct: 626 FNLAAREIYNFFWDEFCDWYI---------EVSKPRLKTEEKHLVQNVLVTVLDNSLKLL 676


>gi|42779168|ref|NP_976415.1| glutamyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|67461813|sp|Q73FB9|SYE_BACC1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|42735083|gb|AAS39023.1| glutamyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 485

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 50

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 51  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 96

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 97  EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 156

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 157 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 210

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 211 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 263

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 264 IEQYKELGY 272


>gi|134298069|ref|YP_001111565.1| glutamyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|238685537|sp|A4J0Y7|SYE_DESRM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|134050769|gb|ABO48740.1| glutamate--tRNA(Gln) ligase [Desulfotomaculum reducens MI-1]
          Length = 482

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 99/293 (33%), Gaps = 60/293 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASL----MAFSGYEVTREYYINDAGAQIN 175
           + +PTGP+H+G  R A+          G  L  +    M  S  E   E  +N       
Sbjct: 8   APSPTGPLHIGGARSALFNWLYARHHGGQFLVRIEDTDMERSSRESE-ENILN------- 59

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWLPI 232
               ++ W         +   P G Y       + ++LA +          +  E+ L +
Sbjct: 60  ----ALRWLGIDWDEGIEVGGPNGPYRQTERLDIYRQLAKELVDAGHAYYCYCSEEELAV 115

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            ++  ++      + +L     +      ED                   +G        
Sbjct: 116 EREALME------KGELPRYLGRCRNLCPEDK-------------AKFEAEGKKPVLRFR 156

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+++T    D  R Q+ F S  +GD +   ++KSD   TY   + A     ++ G  ++
Sbjct: 157 VPENQTITINDHVRGQVEFESNGIGDFI---IMKSDNIPTY---NFAVVVDDHDMGITHV 210

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             V   +H     R   +  A+  +K +        + L       KMSKR G
Sbjct: 211 --VRAEEHLSNTPRQILIYEALGWQKPEFAH-----ISLILGKDRSKMSKRHG 256


>gi|289551711|ref|YP_003472615.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181242|gb|ADC88487.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 657

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 114/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   E++   +V+               + 
Sbjct: 67  TELEYLDDMIAGIKSLWSKLEIS---NDDFIRTTEQRHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPIYENGKI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F    +    DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFN---ISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|227514002|ref|ZP_03944051.1| glutamate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087646|gb|EEI22958.1| glutamate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 472

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 79/228 (34%), Gaps = 21/228 (9%)

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D    +G   G Y +   K++  +Y  EL++          K Y  +  ++  R+   A 
Sbjct: 46  DEGPDKGGDFGPYRQSERKDIYAQYIQELMDKGL-----AYKSYMTEEELEAQRE---AQ 97

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
              H +   E ++       I+   +    +G         PK +  +  D+ +  + F 
Sbjct: 98  KAAHQMPHYEYEYAGMSDDQIKAAQEAAEEKGLKPVIRFRVPKDEVFEWEDLVKGPMSFE 157

Query: 313 STMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +  +G D    + K DG  TY FA  +     K    F       G DH     +  A+ 
Sbjct: 158 AQSIGGDF--VIQKRDGMPTYNFAVVIDDHLMKISHVFR------GDDHVSNTPKQMAIY 209

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            A+  K  +       +  +  +    K+SKR    +       ++G 
Sbjct: 210 QALGWKVPEFGH----MSLIINNETGKKLSKRDESVLQFIEQYRDLGY 253


>gi|196036411|ref|ZP_03103808.1| glutamyl-tRNA synthetase [Bacillus cereus W]
 gi|218901290|ref|YP_002449124.1| glutamyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228925341|ref|ZP_04088437.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228943894|ref|ZP_04106279.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195991041|gb|EDX55012.1| glutamyl-tRNA synthetase [Bacillus cereus W]
 gi|218537465|gb|ACK89863.1| glutamyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228815727|gb|EEM61963.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228834263|gb|EEM79804.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 491

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|319939650|ref|ZP_08014009.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811239|gb|EFW07545.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 883

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + I  D          G    +
Sbjct: 99  -AEDGISRYDLGREKFLDKVWEWK-DEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L ++G++Y G   I   PK++T     +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 217 ATTRPETMFGDTAVAVNPEDPRYKDLI 243


>gi|228919038|ref|ZP_04082417.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840563|gb|EEM85825.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 491

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    ++  K   +LL           +  + +  M    
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQTERLDIYKKLYEDLLE----------RGLAYKCYMTEEE 120

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +           E   + G+      + +     +G +       P  +     D+ 
Sbjct: 121 LEAEREGQIAR---GETPRYAGNHRELTAEQVKEFEAEGRIPSIRFRVPADRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 921

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RNDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|15672774|ref|NP_266948.1| methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|25009394|sp|Q9CHE0|SYM_LACLA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12723712|gb|AAK04890.1|AE006312_10 methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 662

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 113/333 (33%), Gaps = 47/333 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++      +++ G +I   A  +    ++ L  
Sbjct: 16  PSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQRKAEELGMTPKEYLDP 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----------DY 236
             +D+ E           +++       +  +       E+  + + K          ++
Sbjct: 76  MAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIYLGKYAGWYSVSDEEF 135

Query: 237 SVQAMMKIIRDDLKALNIQ-------HDIFISEDDFHRGDPSPIRDIIDNLARQ--GYVY 287
             +  ++ I  D ++ NI        H++   E++ +        D +     +   ++ 
Sbjct: 136 FTETQLEEIFRD-ESGNITGGIAPSGHEVEWVEEETYFFRMGKYADWLLQYYDEHPDFIQ 194

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFK 342
             +          K  ++   L   S   G     +      +  D    Y  A L Y  
Sbjct: 195 PEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFDALLNYITA-LGYNS 253

Query: 343 CKYERGFDNM---IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
              +  F      I ++G +    H+ Y      +  A+     +       L  L +DG
Sbjct: 254 DN-DSNFKKYWPGINMVGKEIVRFHTIY---WPIMLHALGLPAPKKIFAHGWL--LMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +++  G D+VR+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLIERYGLDAVRYYLMR 337


>gi|30260278|ref|NP_842655.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525342|ref|YP_016691.1| glutamyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|47569822|ref|ZP_00240492.1| glutamyl-tRNA synthetase [Bacillus cereus G9241]
 gi|49183121|ref|YP_026373.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49476707|ref|YP_034440.1| glutamyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145130|ref|YP_081699.1| glutamyl-tRNA synthetase [Bacillus cereus E33L]
 gi|165873146|ref|ZP_02217762.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641957|ref|ZP_02400192.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|217957663|ref|YP_002336207.1| glutamyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093858|ref|YP_002527908.1| glutamyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254684409|ref|ZP_05148269.1| glutamyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724228|ref|ZP_05186013.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733758|ref|ZP_05191473.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744609|ref|ZP_05202288.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756314|ref|ZP_05208343.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254758392|ref|ZP_05210419.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300119601|ref|ZP_07057145.1| glutamyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|33301678|sp|Q81VV3|SYE_BACAN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|67461704|sp|Q63HB2|SYE_BACCZ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|67461762|sp|Q6HPT0|SYE_BACHK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|187471088|sp|A0R8F9|SYE_BACAH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|30253599|gb|AAP24141.1| glutamate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500490|gb|AAT29166.1| glutamyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|47553515|gb|EAL11896.1| glutamyl-tRNA synthetase [Bacillus cereus G9241]
 gi|49177048|gb|AAT52424.1| glutamyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49328263|gb|AAT58909.1| glutamate--tRNA ligase (glutamyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978599|gb|AAU20149.1| glutamate--tRNA ligase (glutamyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164711126|gb|EDR16687.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510088|gb|EDR85499.1| glutamyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|217066351|gb|ACJ80601.1| glutamyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237906|gb|ACM10616.1| glutamate--tRNA ligase (glutamyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|298723073|gb|EFI63971.1| glutamyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 485

 Score = 53.0 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 50

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 51  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 96

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 97  EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKEFEAEGRIPSIR 156

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 157 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 210

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 211 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 263

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 264 IEQYKELGY 272


>gi|332638500|ref|ZP_08417363.1| valyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 887

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 93/344 (27%), Gaps = 65/344 (18%)

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141
            I   G        + +        V    +  +   K    +I     N TG +H+GH 
Sbjct: 3   EIDMPG----KYDATAVEAGRYDKWVQENRFKPSGNDKARPYSIVIPPPNVTGKLHLGHA 58

Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
               + D +       G++             ++   ++   + +Q L            
Sbjct: 59  WDTTLQDMIIRQKRMQGFDTL-------WLPGMDHAGIATQAKVEQRL------------ 99

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
                         +      +   EK++  V D+        I+     + +  D    
Sbjct: 100 -------------AEQGVSRYDLGREKFVDQVWDWK-NEYAATIKSQWGKMGLSLDYSRE 145

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 G    +R +   L  +G +Y G          +    D +  +      G    
Sbjct: 146 RFTLDEGLSEAVRKVFVTLYEKGLIYRGEYIINWDPKARTALSDIE--VIHQDDEGAFYH 203

Query: 322 RPLLKSDGSYTYFAAD-LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
                 +   TY   D +     + E  F +                  VA AV     +
Sbjct: 204 VKYPFVEEGVTYDGKDYIEIATTRPETMFGD------------------VAVAVHPSDER 245

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
              L+ ++VR+   G  I +       I   +V  E GS  V+ 
Sbjct: 246 YKDLVGKMVRVPLVGREIPI-------IADEYVDPEFGSGMVKI 282



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 20/155 (12%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+   +   + ++   NVL+  L+   RD    KMSK  G+ I    V+++ G+D++
Sbjct: 496 WVARMMFQSKEFTGRRPFKNVLIHGLI---RDEQGRKMSKSLGNGIDPMDVIEKYGADAL 552

Query: 423 RFMMLWRKNSEL-LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           R+ +       L + F + K+         F  +   A    I     +   +L  DL  
Sbjct: 553 RWFLATGSTPGLDVRFSYTKMDSAWN----FINKIWNASRYVILNLDDETKAELPADLSV 608

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
             +  +              L+     I + T   
Sbjct: 609 LTLADKWI------------LSRLNETIASVTKNF 631


>gi|327541824|gb|EGF28336.1| glutamyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 544

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 113/319 (35%), Gaps = 40/319 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        DAG  ++     +   ++  
Sbjct: 36  APSPTGYLHIGGVRTALFNWLLA---KQAGGQFILRIDDTDAGRNVDAALKPILDGFRWL 92

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D     G   G Y +    +     + +LL           +D++    ++ +R++
Sbjct: 93  GMNWDEGPDVGGPHGPYFQSERGDQYRAAAEKLLADG-----HAYRDFAKPEELQTLREE 147

Query: 249 LKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +      +    +++ED+             +   RQG V    L  P+       D+ 
Sbjct: 148 AQKAGEAFVYDRRWMAEDE-------ATAAKFEAEGRQGVVR---LKMPREGQCVIQDLI 197

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R +++        + D  + ++DGS  Y    LA     +E    ++  V  ++H     
Sbjct: 198 RGEVVV---EWASEQDHVIARADGSPLYH---LASVVDDHELKITHV--VRAAEHLPNTA 249

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA-GDFITLRHVV------DEVG 418
           R   +A ++  +      +   L  +   G   K+SKR    +   R         +++ 
Sbjct: 250 RQVFIAQSLGYELP----IYAHLPYVAEPGGSAKLSKRKLDKYKKNRDFAVLLAHGEKIA 305

Query: 419 SDSVRFMMLWRKNSELLDF 437
                 +     N  L+DF
Sbjct: 306 ERCNMQVDADTFNPVLVDF 324


>gi|222100214|ref|YP_002534782.1| Glutamyl-tRNA synthetase 1 [Thermotoga neapolitana DSM 4359]
 gi|221572604|gb|ACM23416.1| Glutamyl-tRNA synthetase 1 [Thermotoga neapolitana DSM 4359]
          Length = 471

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 100/286 (34%), Gaps = 45/286 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  +  +         REY           L  
Sbjct: 7   APSPTGFLHVGGARTALFNFLFARKEKGRFVLRIEDTDLERSEREY--------EEKLMD 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W         D     G   G Y +    E+  KY+  L+   +  ++     Y+  
Sbjct: 59  SLRWLGLMWDEGPDV----GGDFGPYRQSERVEIYRKYAEMLVKEGKAYYV-----YAYP 109

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++ IR+ L  L+       S+D F   D    R        +G         P+   T
Sbjct: 110 EEIEEIREKL--LSEGKPPHYSQDMFEEYDTPERRR---EYEEKGLSPAVFFKMPRKDYT 164

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ + +++FR   +GD     +++S+G  TY   + A           ++I   G D
Sbjct: 165 LN-DVVKGEVVFRKGSIGDF---VIMRSNGLPTY---NFACVVDDMLMEITHVIR--GDD 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A   K     V       L  DG   K+SKR G
Sbjct: 216 HLSNTLRQLAIYEAFERKPP---VFAHVSTILGPDGK--KLSKRHG 256


>gi|319744087|gb|EFV96464.1| glutamate--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 503

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 100/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 29  APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 82

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL   Y  +LL           K Y V
Sbjct: 83  -----RWLGMDWDESPETHENYRQSERL-----ELYQHYIDQLLAEG-----KAYKSY-V 126

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 127 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVNESGI 184

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 185 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 237

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   +  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 238 DHIANTPKQLMIYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 287


>gi|332367370|gb|EGJ45103.1| valine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 882

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 75/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSSDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E +L  V ++        I++    + +  D          G    +
Sbjct: 99  -REQGISRYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +   L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVELYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|242372747|ref|ZP_04818321.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349520|gb|EES41121.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 466

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 143/421 (33%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +    ++ +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMNHMQEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +           A     D++     F+ G        +D+L          +    
Sbjct: 128 LVDEGY---------AYESDGDVYFRTRQFN-GYGKLSHQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       D P  +    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAYH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E+  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        + + +E+     +++    ++  V+++         +  + YDLA + + 
Sbjct: 325 IEEREAIATDLEEHTEYMNQIDEILK---QFETVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|108804372|ref|YP_644309.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765615|gb|ABG04497.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 853

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 52/190 (27%), Gaps = 33/190 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       SG         +     +     N TG +H+GH     + DTL       GY
Sbjct: 20  RWYGEWERSGAFEADPDPEREPYCIV-LPPPNVTGALHMGHALNGAIQDTLVRRARMKGY 78

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                      +AL+   +D        V    V ++L  +   
Sbjct: 79  ---------------------------EALWLPGTDHASIALQNV----VERKLMREEGK 107

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +   E +L    ++++ A    I   LK L    D               +      
Sbjct: 108 TRWDLGREAFLERCWEFALDA-RSTILGQLKRLGASVDWRRLRFTMDERYVDAVLTAFVE 166

Query: 280 LARQGYVYEG 289
           L  QG +Y G
Sbjct: 167 LYNQGLIYRG 176



 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +V R+  +    + +     V +  +V L  DG   KMSK  G+ I    + +E G+D+
Sbjct: 494 LWVARMIMMGLRFTGEVPFRKVNVHSIV-LASDGT--KMSKSKGNVIDPLDLFEEYGTDA 550

Query: 422 VRFMMLWRKNSELLDFDFCKVKE 444
           VRF +L++ +++   +   +   
Sbjct: 551 VRFGLLYQSSTQDFAYSHERASM 573


>gi|228963188|ref|ZP_04124357.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228796446|gb|EEM43885.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 491

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 96/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    E  D Y    L+  E                  + 
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQ---TERLDIYKKLYLDLLERGLAYKC----------YMT 117

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +  I   E   + G+      + +     +G +       P  +     D+ 
Sbjct: 118 EEELEAEREGQISRGETPRYAGNHRDLTEEQMKEFEAEGRIPSIRFRVPADRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|262370952|ref|ZP_06064275.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262314028|gb|EEY95072.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 947

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 94/289 (32%), Gaps = 45/289 (15%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSK 297
             I R     + I   +    ++ H      I ++   + ++G    Y  E         
Sbjct: 475 WCISRQRTWGVPIPFFVHKDTNELHPRTAELIEEVAKLIEQEGIDAWYNREAKDFIGDEA 534

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
               C  D   + F S               G+  Y     A  + + E      +Y+ G
Sbjct: 535 EQYNCVRDTLDVWFDS---------------GTTHY-----AVLREREELTDPADLYLEG 574

Query: 358 SDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SD   G+ +     + A++E+     +L    V    D    KMSK  G+ IT + ++ +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVV---DEKGRKMSKSLGNIITPQDIIKD 631

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPD 474
           +G+D +RF +         +    K       +        Y R R+  R   A      
Sbjct: 632 MGADGLRFWIAS--ADYRYEMTAGKEIFNRASD-------GYRRIRNTLRFLLANLNGFK 682

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
              D  P + +    ++      ++   A+  + I+ A      + +A 
Sbjct: 683 PSTDALPVDQLIALDQY------ILQRAADVQKTIQQAYEDMNFHIVAN 725


>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 505

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 51/393 (12%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             L + + + IE  + +     K+ +          +H+G+ R  V+ D LA    + GY
Sbjct: 12  MNLYNTMSNKIEEFKPIEEGKVKMYV--CGPTVYNYIHLGNARPVVIFDILARYFKYRGY 69

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +VT      D   +I         +       +  ++ E Y  G +       +      
Sbjct: 70  DVTYVQNFTDVDDKI--------IKRANEEGISPKEVTEKYIQGFFEDTELLNILQDIKR 121

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED----DFHRGDPSPIRD 275
             +     + +  ++          I       N+  D+   ED       + D   I  
Sbjct: 122 PKVTENMPEIIETIEKLIENGYAYEIDG-----NVFFDVKKYEDYGKLSNQKIDELEIGA 176

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            +D +  +    +  L   K +     D    Q                    G   +  
Sbjct: 177 RVDIMEIKNNPLDFALWKKKKEGEPYWDSPWGQ--------------------GRPGWHI 216

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD 394
              A  K      FD    + G          E  +A +                 +  +
Sbjct: 217 ECSAMSKKYLGETFD----IHGGGQDLIFPHHENEIAQSKCAYHGHFAKYWVHNGFVQVN 272

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK  G+F  LR ++ +   + +R  +L     + ++F F  +     EN    +
Sbjct: 273 G--DKMSKSTGNFFLLREILGKFSGNVIRLFILSTHYRKPVNFSFEDM-----ENTKKTL 325

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           Q   +  R   +  + +   +  +      I +
Sbjct: 326 QNVISSIRRFEKSLEKLSSGIKSEDVSDEKINE 358


>gi|257058375|ref|YP_003136263.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588541|gb|ACU99427.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 484

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 111/337 (32%), Gaps = 56/337 (16%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E G+  +        ++         H+GH R  +V D +   + + GYEV         
Sbjct: 20  ETGKIRMYCCGITVYDYC--------HLGHARTCMVWDVVRRYLQWRGYEV--------- 62

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYP-GVYLKHVGKELADKYSSELLNFPEEKW 229
                        +Y Q   + D  +       G  ++ V     + Y  ++     +K 
Sbjct: 63  -------------QYIQNFTDIDDKILNRARQEGTTMEAVSDRFIEAYFEDMERLHVQKA 109

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               +       +K +  +L+A    +    D++ S   F        R  +++L     
Sbjct: 110 DAYPRATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRK-LEDLQAGA- 167

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
              G +     +  +K D     +   +       D P     G   +     A  + + 
Sbjct: 168 --SGRVEVQDPEAAKKKDPFDFAVWKAAKPGEPSWDSPW--GQGRPGWHIECSAMVRERL 223

Query: 346 ERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
               D  I+V GSD     H   + + EA        K      L   +         KM
Sbjct: 224 GETID--IHVGGSDLIFPHHENEIAQSEAA-----TGKPLARYWLHNGMVKVEG---EKM 273

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           SK  G+FIT+R ++D+V   ++R  +L     + +DF
Sbjct: 274 SKSLGNFITIRDLLDKVDPMAMRLFILQAHYRKPVDF 310


>gi|218245339|ref|YP_002370710.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226735051|sp|B7JUH4|SYC_CYAP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218165817|gb|ACK64554.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 484

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 112/337 (33%), Gaps = 56/337 (16%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E G+  +        ++         H+GH R  +V D +   + + GYEV         
Sbjct: 20  ETGKIRMYCCGITVYDYC--------HLGHARTCMVWDVVRRYLQWRGYEV--------- 62

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYP-GVYLKHVGKELADKYSSELLNFPEEKW 229
                        +Y Q   + D  +       G  ++ V     + Y  ++ +   +K 
Sbjct: 63  -------------QYIQNFTDIDDKILNRARQEGTTMEAVSDRFIEAYFEDMEHLHVQKA 109

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGY 285
               +       +K +  +L+A    +    D++ S   F        R  +++L     
Sbjct: 110 DAYPRATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRK-LEDLQAGA- 167

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
              G +     +  +K D     +   +       D P     G   +     A  + + 
Sbjct: 168 --SGRVEVQDPEAAKKKDPFDFAVWKAAKPGEPSWDSPW--GQGRPGWHIECSAMVRERL 223

Query: 346 ERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
               D  I+V GSD     H   + + EA        K      L   +         KM
Sbjct: 224 GETID--IHVGGSDLIFPHHENEIAQSEAA-----TGKPLARYWLHNGMVKVEG---EKM 273

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           SK  G+FIT+R ++D+V   ++R  +L     + +DF
Sbjct: 274 SKSLGNFITIRDLLDKVDPMAMRLFILQAHYRKPVDF 310


>gi|153955828|ref|YP_001396593.1| valyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146348686|gb|EDK35222.1| ValS [Clostridium kluyveri DSM 555]
          Length = 882

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    + L +I      +            I     N TG +H+GH     + D + 
Sbjct: 10  TYNPKAFEERLYNIWQEKGYFTPKADHTKKSYTIVIPPPNITGKLHLGHALDDTIQDIII 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + ++ L  +          GV  K +G+
Sbjct: 70  RTKRMQGYNTL-------WVPGEDHASIATEVKVEKELLKD----------GVVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   K + E  +                     IR+ +K L    D          G   
Sbjct: 113 EAFLKRTWEWTD----------------EYRARIREQIKKLGCSVDFTRERFTMDEGLNK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R     L  +G++Y+G
Sbjct: 157 AVRKFFVKLYEEGFIYQG 174


>gi|146292162|ref|YP_001182586.1| isoleucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166229770|sp|A4Y4A4|SYI_SHEPC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145563852|gb|ABP74787.1| Isoleucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 940

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 116/332 (34%), Gaps = 51/332 (15%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD---- 328
           +  + + + +QG                  D+D  +LL      GD+ D+    +D    
Sbjct: 496 MERVANRIEQQG-------------IQAWWDLDAAELL------GDEADQYRKVTDTLDV 536

Query: 329 --GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLL 385
              S + F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL 
Sbjct: 537 WYDSGSTFSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLT 594

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                   DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +
Sbjct: 595 HGF---TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNR 650

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +        AY R R+  R         D     ++++  E         ++   A  
Sbjct: 651 SAD--------AYRRIRNTARFLLANLNGFD---PAKDLVAVEDMVALDRW-VVRRAAAL 698

Query: 506 PRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
            + I  A      + +   L    S      +
Sbjct: 699 QQEIIEAYDQYNFHIVTQKLMQFCSVELGSFY 730


>gi|120599901|ref|YP_964475.1| isoleucyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166229772|sp|A1RMM6|SYI_SHESW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120559994|gb|ABM25921.1| Isoleucyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 940

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 116/332 (34%), Gaps = 51/332 (15%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD---- 328
           +  + + + +QG                  D+D  +LL      GD+ D+    +D    
Sbjct: 496 MERVANRIEQQG-------------IQAWWDLDAAELL------GDEADQYRKVTDTLDV 536

Query: 329 --GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLL 385
              S + F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL 
Sbjct: 537 WYDSGSTFSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLT 594

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                   DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +
Sbjct: 595 HGF---TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNR 650

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +        AY R R+  R         D     ++++  E         ++   A  
Sbjct: 651 SAD--------AYRRIRNTARFLLANLNGFD---PAKDLVAVEDMVALDRW-VVRRAAAL 698

Query: 506 PRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
            + I  A      + +   L    S      +
Sbjct: 699 QQEIIEAYDQYNFHIVTQKLMQFCSVELGSFY 730


>gi|326406343|gb|ADZ63414.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 662

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 113/333 (33%), Gaps = 47/333 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++      +++ G +I   A  +    ++ L  
Sbjct: 16  PSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQRKAEELGMTPKEYLDP 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----------DY 236
             +D+ E           +++       +  +       E+  + + K          ++
Sbjct: 76  MAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIYLGKYAGWYSVSDEEF 135

Query: 237 SVQAMMKIIRDDLKALNIQ-------HDIFISEDDFHRGDPSPIRDIIDNLARQ--GYVY 287
             +  ++ I  D ++ NI        H++   E++ +        D +     +   ++ 
Sbjct: 136 FTETQLEEIFRD-ESGNITGGIAPSGHEVEWVEEETYFFRMGKYADWLLQYYDEHPDFIQ 194

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFK 342
             +          K  ++   L   S   G     +      +  D    Y  A L Y  
Sbjct: 195 PEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFDALLNYITA-LGYNS 253

Query: 343 CKYERGFDNM---IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
              +  F      I ++G +    H+ Y      +  A+     +       L  L +DG
Sbjct: 254 DN-DSNFKKYWPGINMVGKEIVRFHTIY---WPIMLHALGLPAPKKIFAHGWL--LMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +++  G D+VR+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLIERYGLDAVRYYLMR 337


>gi|314933819|ref|ZP_07841184.1| valine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653969|gb|EFS17726.1| valine--tRNA ligase [Staphylococcus caprae C87]
          Length = 876

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 34/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKDTYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHELGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    +R +  
Sbjct: 124 S------------------------FIRQQWAKLGLGLDYSRERFTLDEGLSKAVRKVFV 159

Query: 279 NLARQGYVYEG 289
           +L  +  +Y G
Sbjct: 160 DLYNKDIIYRG 170



 Score = 36.8 bits (84), Expect = 9.0,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+       ++++   +VLL  LVR   DG   KMSK  G+ +    V+DE G+DS+
Sbjct: 487 WVARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--KMSKSLGNGVDPMDVIDEYGADSL 543

Query: 423 RFMMLWRKNSEL 434
           R+ +    +   
Sbjct: 544 RYFLATGSSPGH 555


>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 921

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 128/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D +       V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFNPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|297587469|ref|ZP_06946113.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574158|gb|EFH92878.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 665

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 110/338 (32%), Gaps = 65/338 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    ++ DTL       GY+V      ++ G ++          Y++A   
Sbjct: 17  PSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKL----------YEKAKEK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMK--IIR 246
           N  D P  Y     +    K+L  K        +   ++     V++   +   K  I +
Sbjct: 67  NMGDNPLNYI--DPIVQSAKDLWKKLDIDIDSFVRSTDKAHEKNVQEIFQKLYDKGDIYK 124

Query: 247 DDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY------EGILPPPKSKTT 299
              K    +  + F +E     G        +     + Y +      + IL   K    
Sbjct: 125 STYKGHYCVDCEAFWTESQLKDGKCPDCGRDVHYHEEESYFFRLSKYKDRILQLYKDNPD 184

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM- 356
                 RK  +  + + G+  D  + ++             F    +  FD  ++IYV  
Sbjct: 185 FLKPESRKNEMVNNFLSGELEDLSVSRTS------------FDWGVKVPFDDKHIIYVWI 232

Query: 357 ------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------- 395
                       G D   + K        V ++  + + ++   + +  D          
Sbjct: 233 DALSCYLTGIGYGQDEELFKKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAH 292

Query: 396 -----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                   KMSK  G+      ++D  G D++++ +L 
Sbjct: 293 GWILFNEDKMSKSKGNVYYPEPIIDLYGVDALKYYILR 330


>gi|89100733|ref|ZP_01173588.1| glutamyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084550|gb|EAR63696.1| glutamyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 485

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 101/294 (34%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A   +  G  + R   I D   + N         +Y Q
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR--SKGGKFIIR---IEDTDLKRNIEGGEESQLKYLQ 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKII 245
            L  + D  + +    G Y +    ++  +   ELL+     K     ++   +   ++ 
Sbjct: 65  WLGIDWDESIDKDGGYGPYRQSERNDIYQELYQELLDKDLAYKCYCTEEELEAEREEQMA 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R D    + +      E+              + L  +G         PK K     DM 
Sbjct: 125 RGDNPQYSGKCRHLTQEER-------------EKLEAEGRRPSIRFIVPKGKVYAFNDMV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 172 KDEVSFESDGFGDF---VIVKKDGIPTY---NFAVAADDHMMKISHVLR--GDDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A   +      +      L  +    K+SKR    I      +++G 
Sbjct: 224 KQLMIYEAFGWEPPVFGHM-----TLIVNESRKKLSKRDESIIQFIEQYEDLGY 272


>gi|296535500|ref|ZP_06897687.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264170|gb|EFH10608.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 898

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 65/216 (30%), Gaps = 33/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            LSP+   + L     +  ++G +         I     N TG +H+GH     + DTL 
Sbjct: 5   TLSPASFEQRLYEGWEAAGKFGAHPDSTAAPFTIMIPPPNVTGSLHIGHALTFTIQDTLI 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +   +   + AG     +   +                     GV  + +G+
Sbjct: 65  RWRRMQGRDALWQPGTDHAGIATQMVVERLLAG-----------------QGVQRREIGR 107

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          EK+L  V  +  ++   I R  L+ L    D          G   
Sbjct: 108 ---------------EKFLEHVWAWKGESGGSITRQ-LRRLGASLDWPRERFTMDEGLSQ 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R++   L  QG +Y            Q    D +
Sbjct: 152 AVREVFVTLHEQGLIYRDRRLVNWDPKFQTAISDLE 187



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +            V +  LV   RD    KMSK  G+ I    +VD  G+D++
Sbjct: 511 WVARMMMMGIHFMGDVPFKTVYIHGLV---RDEKGQKMSKSKGNVIDPLELVDSFGADAL 567

Query: 423 RFMMLW 428
           RF +  
Sbjct: 568 RFAIAS 573


>gi|242242928|ref|ZP_04797373.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233643|gb|EES35955.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 886

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      VS   +  +         I     N TG +H+GH     + D +  +
Sbjct: 18  DPREVEKGRYEEWVSNGYFKPSEDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L  N+  +               + 
Sbjct: 78  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDLGREKFLQQAWDW 128

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y++                         IR     L +  D          G    +
Sbjct: 129 KEEYAT------------------------FIRQQWAKLGLGLDYSRERFTLDDGLSKAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 165 RKVFVDLYNKGIIYRGERIINWDPKARTALSD 196



 Score = 37.2 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       ++++   +VLL  LVR   DG   KMSK  G+
Sbjct: 489 TGYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--KMSKSLGN 537

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            +    V+DE G+DS+R+ +    +   
Sbjct: 538 GVDPMDVIDEYGADSLRYFLATGSSPGH 565


>gi|289551670|ref|YP_003472574.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181201|gb|ADC88446.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 466

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/421 (13%), Positives = 136/421 (32%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY+V       D  +   
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYDV-------DYVSNFT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R Q+ L  +  ++ + Y    Y       +    S+  +    E  +  +K+
Sbjct: 69  DVDDKLIKRSQE-LNESVPEIADRYIQAFYEDVGALNVKKATSNPRVMDHMEDIIEFIKN 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     + D +         D   +   I+   ++    +  L    
Sbjct: 128 LVDEGYAYESHGDVYFRTRKFDGYGKLSH-QSIDDLKVGARIEAGEQKEDALDFTLWKKA 186

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                            S+  G+            +    + +AY     E G    I+ 
Sbjct: 187 KPGEISW----------SSPFGEGRP--------GWHIECSVMAYH----ELGKTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E+  D +RF M+       ++++   V                   +S   + ++ +  
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNMELVS----------------AAKSGLERIRNSYQL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        I +++++      ++    ++ +V+ +         +  + YDLA + + 
Sbjct: 325 IEERETIATNIVEQTDYIEQIDAILK---QFEQVMND--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|315660343|ref|ZP_07913196.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494632|gb|EFU82974.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 657

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 114/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   E++   +V+               + 
Sbjct: 67  TELEYLDDMIAGIKSLWSKLEIS---NDDFIRTTEQRHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPIYENGKI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F  +      DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|254514076|ref|ZP_05126137.1| valyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676319|gb|EED32684.1| valyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 921

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 66/227 (29%), Gaps = 43/227 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ + +       +   +      +   + I     N TG +H+GH     + D L 
Sbjct: 4   TFQPADIEQRWYKSWEAAGYFAPKGGDEPYCIMI--PPPNVTGSLHMGHGFQETIIDALV 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GY+   +   + AG     +                               V +
Sbjct: 62  RYHRMAGYDTLWQVGTDHAGIATQMI-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +   +      + ++  + D+   +    I   L+ L    D          G   
Sbjct: 91  QLAAE-GKDRHEIGRDAFIDKIWDWKASSG-GTITQQLRRLGASPDWSRERFTMDEGLSQ 148

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
            +++    L R+G +Y G         L    S      + ++ +L 
Sbjct: 149 AVQETFIRLYREGLIYRGQRLVNWDPALHTAISDLEVVSEEEQGKLW 195


>gi|314937167|ref|ZP_07844514.1| glutamate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655786|gb|EFS19531.1| glutamate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 484

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W       + D D   G Y       +   L  +   E   +   K     ++   +
Sbjct: 64  --KWLGLDWDESIDKDKGHGPYRQSERADIYNPLIQQLLDEDKAY---KCYMTEEELEEE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +I R ++     +H     E                    +G  +      PK KT 
Sbjct: 119 REAQIARGEMPRYGGKHAHLTEEQR-------------QQFEAEGRKHAIRFRVPKDKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G 
Sbjct: 166 TFDDMVKGEISFDSNNIGDW---VIVKKDGVPTYN------FAVAVDDHYMEISDVIRGD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEPPRFAHM-----SLIVNEQRKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|313905014|ref|ZP_07838384.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470084|gb|EFR65416.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 884

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 64/245 (26%), Gaps = 33/245 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + +      +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKEIEERTYQKWMDKNYFRAEVNRDKKPFTIVMPPPNITGKLHMGHALDNTMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  A++   +    L +   D  +             
Sbjct: 68  RYKRMQGYEAL-------WQPGTDHAAIATEVKVTNMLKDKGID--KHEIGREKFLEHCW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              D+Y   ++N                         LK L    D          G   
Sbjct: 119 AWRDEYGRTIINQ------------------------LKKLGSSADWSRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   L  +G++Y+G          Q    D +            ++ P++  +G +
Sbjct: 155 AVEEVFCRLYEKGWIYKGSRIINWCPKCQTSLSDAEVEHEDQNGFFWHINYPIVGEEGRF 214

Query: 332 TYFAA 336
              A 
Sbjct: 215 VEIAT 219


>gi|319744516|gb|EFV96871.1| valine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 883

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDTEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDDGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|283796427|ref|ZP_06345580.1| valine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075837|gb|EFE13201.1| valine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091426|emb|CBK77533.1| valyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 883

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 37/247 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYG----RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +P+ +   L    +    +     R          I     N TG +H+GH     + D 
Sbjct: 9   NPADIEDRLYQKWLDSKYFHADAERGKREGKKPFTIVMPPPNITGQLHMGHALDNTMQDI 68

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       GY                           +AL+   +D          +  +
Sbjct: 69  LIRYKRMQGY---------------------------EALWQPGTDHAAIATEVKVIDKL 101

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E  DK+     +   E +L    ++  +   +I++  L  L    D          G 
Sbjct: 102 KSEGIDKH-----DLGREGFLEKAWEWKEEYGNRIVKQ-LHKLGSSADWDRERFTMDEGC 155

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + ++   L  +GY+Y+G          Q    D +            ++ P++  +G
Sbjct: 156 SDAVLEVFTKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEEQDGFFWHINYPIVGEEG 215

Query: 330 SYTYFAA 336
            +   A 
Sbjct: 216 RFVEIAT 222


>gi|166368993|ref|YP_001661266.1| valyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166091366|dbj|BAG06074.1| valyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 906

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P            +   +  N    G    I     N TG +H+GH   + + DTL   
Sbjct: 10  DPKITETKWQQYWENQEIFTANPEKGGETYCIVIPPPNVTGSLHMGHAFESSLIDTLVRY 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G                           +  L+   +D        +  + +  E 
Sbjct: 70  KRMTG---------------------------KNTLWLPGTDHASIAVQAILDRQLKAEK 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y      F E  W    K+ S   ++      L+ L +  D          G    +
Sbjct: 103 TDRYQLGREKFLERAWQ--WKEESGSTIVNQ----LRRLGVSVDWTRERFTMDEGLSHAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 157 RTAFIKLYEDGLIYRG 172



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 93/297 (31%), Gaps = 38/297 (12%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN-----LA 281
           E+W  + +D+ V+     I   L     Q   +    + +    +    ++       LA
Sbjct: 387 ERWTKVYRDWLVKLKDWCISRQLW-WGHQIPAWYIISETNNEITNHTPFVVAQDETSALA 445

Query: 282 RQGYVY-EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           +    Y E I+                 L   STM   +    L            D  Y
Sbjct: 446 KAKQEYGEDIIIQQDPDVLDTWFSSG--LWPFSTMGWPEKTLDL------------DTYY 491

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  GFD +I+         V R+  +A   + +    +V +  LV   RD    KM
Sbjct: 492 PTTTLVTGFD-IIFFW-------VARMTMMAGYFTGQMPFKDVYIHGLV---RDENGKKM 540

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK A + I    ++D+ G+D++R+ ++        D      ++  +   V   +    +
Sbjct: 541 SKSANNGIDPLILIDKYGTDALRYTLIREVAGAGQDISLQYNRKTDESESVEAARNFANK 600

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             +  R           +     V+      D         L+ Y + ++      E
Sbjct: 601 IWNASRFVMMNLEGKTPEELGEPVLENLELADRW------ILSRYHQTVQKTRDYLE 651


>gi|27468257|ref|NP_764894.1| valyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867133|ref|YP_188802.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875919|ref|ZP_06284786.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366387|ref|ZP_06613066.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81819377|sp|Q5HNN9|SYV_STAEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81843675|sp|Q8CS83|SYV_STAES RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27315803|gb|AAO04938.1|AE016748_172 valine-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637791|gb|AAW54579.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294944|gb|EFA87471.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319512|gb|EFE59879.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733785|gb|EGG70111.1| valine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737114|gb|EGG73368.1| valine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 876

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      VS   +  +         I     N TG +H+GH     + D +  +
Sbjct: 8   DPREVEKGRYEEWVSNGYFKPSEDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L  N+  +               + 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDLGREKFLQQAWDW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y++                         IR     L +  D          G    +
Sbjct: 119 KEEYAT------------------------FIRQQWAKLGLGLDYSRERFTLDDGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 155 RKVFVDLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.2 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       ++++   +VLL  LVR   DG   KMSK  G+
Sbjct: 479 TGYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--KMSKSLGN 527

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            +    V+DE G+DS+R+ +    +   
Sbjct: 528 GVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|294101891|ref|YP_003553749.1| valyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616871|gb|ADE57025.1| valyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 888

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 80/269 (29%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +     S  +    +   +       +I     N TG +H+GH       D + 
Sbjct: 11  TYDPTPIEDKWYSWWLESGLFHAEVDTTKEAFSIVIPPPNVTGSLHMGHAFNNTFQDIVC 70

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+                     V W            LP   + G+  ++V +
Sbjct: 71  RYKRMNGFN--------------------VLW------------LPGTDHAGIATQNVVE 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   E+++  V ++  +   +II + +K L    D          G   
Sbjct: 99  RELAKDGISRHDLGREEFVNKVWEWKEEYGSRII-EQMKKLGNSCDWERERFTLDEGLSQ 157

Query: 272 PIRDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R +   L ++G +Y+G                 +    D K  L+       + +  L
Sbjct: 158 AVRTVFVRLYKKGLIYKGRYIINWCPRCHTALSDIEVEHEDLKGCLYYVKYPFVEGEGYL 217

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           L +         D+A         + +MI
Sbjct: 218 LVATTRPETILGDVAIAVHPRAEKYRHMI 246


>gi|319425458|gb|ADV53532.1| isoleucyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 940

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 116/332 (34%), Gaps = 51/332 (15%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD---- 328
           +  + + + +QG                  D+D  +LL      GD+ D+    +D    
Sbjct: 496 MERVANRIEQQG-------------IQAWWDLDAAELL------GDEADQYRKVTDTLDV 536

Query: 329 --GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLL 385
              S + F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL 
Sbjct: 537 WYDSGSTFSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLT 594

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                   DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +
Sbjct: 595 HGF---TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNR 650

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           S +        AY R R+  R         D     ++++  E         ++   A  
Sbjct: 651 SAD--------AYRRIRNTARFLLANLNGFD---PAKDLVAVEDMVALDRW-VVRRAAAL 698

Query: 506 PRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
            + I  A      + +   L    S      +
Sbjct: 699 QQEIIEAYDQYNFHIVTQKLMQFCSVELGSFY 730


>gi|260061293|ref|YP_003194373.1| glutamyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785425|gb|EAR16594.1| glutamyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 506

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 94/293 (32%), Gaps = 50/293 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTR--EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+          GD +  +         +  E YI          
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKHGGDFILRIEDTDQNRFVKGAEEYI---------- 59

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             S+ W     +  ++    EG Y G Y +    E  D+Y        +  W      + 
Sbjct: 60  VESLEWL---GIPFDEGPGKEGGY-GPYRQ---SERKDRYREFAEQLVQSGWAYY--AFD 110

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +   R D +             +          + +         Y      PK +
Sbjct: 111 RPEALDAHRADHEKKGKTFIYNWHNREKLDNSLGMSPEALQFRLDAEDPYVIRFQWPKDQ 170

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T +  D+ R  +   +  +    D+ L KSDG  TY    LA     +     ++I   G
Sbjct: 171 TLEFQDLIRGDIRIDTNTLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--G 222

Query: 358 SDH----SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +     + +++    +  A   +  Q   L   +    +     K+SKR G+
Sbjct: 223 EEWLPSLALHIQ----LYRAFGWEAPQFAHLPLIMKPTGKG----KLSKRDGE 267


>gi|329724727|gb|EGG61233.1| valine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 876

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      VS   +  +         I     N TG +H+GH     + D +  +
Sbjct: 8   DPREVEKGRYEEWVSNGYFKPSEDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L  N+  +               + 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDLGREKFLQQAWDW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y++                         IR     L +  D          G    +
Sbjct: 119 KEEYAT------------------------FIRQQWAKLGLGLDYSRERFTLDDGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 155 RKVFVDLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.2 bits (85), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       ++++   +VLL  LVR   DG   KMSK  G+
Sbjct: 479 TGYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--KMSKSLGN 527

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            +    V+DE G+DS+R+ +    +   
Sbjct: 528 GVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|323490591|ref|ZP_08095796.1| glutamyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395683|gb|EGA88524.1| glutamyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 487

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 94/292 (32%), Gaps = 29/292 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     +  +        D    I T  +S     +  
Sbjct: 10  APSPTGHLHIGGARTALFNYLFAR---HNNGKFIVRIEDTDTARNIETGIMSQLDNLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D  +  G   G Y +    +    +S ++L           K +     +++ RD 
Sbjct: 67  GIEHDESIDVGGEYGPYRQMERLDTYKNHSDQMLEKGL-----AFKCFCTPEELEVERDA 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            KA  I    +           +   + +      G  +      P + T +  D+ R  
Sbjct: 122 QKAAGIAAPQYSGTC------RNLTAEEVAEREESGKTFSIRAKVPTNVTYEFNDLVRGP 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F S  +GD     ++K+ G  TY FA  +  +  K    F       G +H     R 
Sbjct: 176 ISFESKDIGDW---VMVKTTGIPTYNFAVVIDDYLMKISHVFR------GEEHLSNTPRQ 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A               + L  +    K+SKR    +       E+G 
Sbjct: 227 MMIYDAFGWDYP-----SYGHMTLIINEDRKKLSKRDESILQFISQYKELGY 273


>gi|152973935|ref|YP_001373452.1| glutamyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082150|sp|A7GJZ9|SYE_BACCN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|152022687|gb|ABS20457.1| glutamyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 485

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 99/299 (33%), Gaps = 44/299 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +V R    N AG           
Sbjct: 10  APSPTGHLHIGNARTALFNYLFARHQDGKFIIRIEDTDVKR----NVAG------GEESQ 59

Query: 183 WRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            +Y + L  + D  +  G   G Y +    ++  +   +LL           +  + +  
Sbjct: 60  LKYLKWLGMDWDEGVDVGGKYGPYRQTERLDIYKELYEDLLE----------RGLAYKCY 109

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M     + +           E   + G+  +   + I     +G V       P ++  +
Sbjct: 110 MTEEELEAEREGQIAR---GETPRYAGNHRNLTEEQIAQFEAEGRVPSIRFRVPDNREYK 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ +  + F S   GD     ++K DG  TY   + A     +     +++   G DH
Sbjct: 167 FNDIVKGDVTFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDH 218

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +   +  A      Q   +      L  +    K+SKR    I      + +G 
Sbjct: 219 ISNTPKQMMIYEAFGWDTPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYEALGY 272


>gi|315659130|ref|ZP_07911995.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315495854|gb|EFU84184.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 466

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/421 (13%), Positives = 137/421 (32%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY+V       D  +   
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYDV-------DYVSNFT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R Q+ L  +  ++ + Y    Y       +    S+  +    E  +  +K+
Sbjct: 69  DVDDKLIKRSQE-LNESVPEIADRYIQAFYEDVGALNVKKATSNPRVMDHMEDIIEFIKN 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     + D +         D   +   I+   ++    +  L    
Sbjct: 128 LVDEGYAYESHGDVYFRTRKFDGYGKLSH-QSIDDLKVGARIEAGEQKEDALDFTLWKKA 186

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                            S+  G+            +    + +AY     E G    I+ 
Sbjct: 187 KPGEISW----------SSPFGEGRP--------GWHIECSVMAYH----ELGKTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E+  D +RF M+       ++++   V                   +S   + ++ +  
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNMELVS----------------AAKSGLERIRNSYQL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        I +++++     +++    ++ +V+ +         +  + YDLA + + 
Sbjct: 325 IEERETIATNIVEQTDYIEQIDEILK---QFEQVMND--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|163782331|ref|ZP_02177329.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882364|gb|EDP75870.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 493

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 131/381 (34%), Gaps = 51/381 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    +  DT+A      GY+V      ++ G +I   A        +    +  +L
Sbjct: 18  HIGHAYTTIAADTVARFYRLRGYDVFFLTGTDEHGLKIQKSA--------EERGVSPKEL 69

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALN- 253
            +        K + + L  +Y+   +   + + + +VK+   ++     I   + +    
Sbjct: 70  AD--RNSENFKRLWEFLGIEYTK-FIRTTDPEHVELVKEVFTKSYENGDIYLGEYEGWYC 126

Query: 254 IQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYV-----YEGILPPPKSKTTQKCDMDRK 307
           +  + F SE +   G+  PI     + +    Y      Y+  L     +  +    D +
Sbjct: 127 VGCEEFKSEMELAEGNSCPIHMKPCEYIREPSYFFRLSKYQDKLLELYEEHPEFVRPDYR 186

Query: 308 QLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAAD-----LAYFKCKYERGF 349
           +    S +     D  + +              +G   Y   D     ++    + +R +
Sbjct: 187 RNEIISFVKQGLKDLSVTRPRSRVRWGIPVPFDEGHTIYVWFDALFNYISALNGQVDRYW 246

Query: 350 DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              ++++G D    H+ Y     A   +V  +  +            +     KMSK  G
Sbjct: 247 PADLHIVGKDILRFHTVY---WPAFLFSVGYEVPETVFAHGWWTVEGK-----KMSKSLG 298

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           + I+   VV+E G D VR+ +L      +  DF    +  +        +   ++R  S+
Sbjct: 299 NVISPYEVVEEYGLDEVRYFLLREVPFGQDGDFSKEAILNRINGELANEIGNLFSRVVSM 358

Query: 465 FRQAKDIFPDLDFDLFPRNVI 485
            ++      +   D   R + 
Sbjct: 359 SKKYLGGKVEGRGDDAYRELA 379


>gi|325141637|gb|EGC64099.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 929

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|219856195|ref|YP_002473317.1| hypothetical protein CKR_2852 [Clostridium kluyveri NBRC 12016]
 gi|219569919|dbj|BAH07903.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 898

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    + L +I      +            I     N TG +H+GH     + D + 
Sbjct: 26  TYNPKAFEERLYNIWQEKGYFTPKADHTKKSYTIVIPPPNITGKLHLGHALDDTIQDIII 85

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + ++ L  +          GV  K +G+
Sbjct: 86  RTKRMQGYNTL-------WVPGEDHASIATEVKVEKELLKD----------GVVKKEIGR 128

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   K + E  +                     IR+ +K L    D          G   
Sbjct: 129 EAFLKRTWEWTD----------------EYRARIREQIKKLGCSVDFTRERFTMDEGLNK 172

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R     L  +G++Y+G
Sbjct: 173 AVRKFFVKLYEEGFIYQG 190


>gi|292669954|ref|ZP_06603380.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648425|gb|EFF66397.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 904

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 63/203 (31%), Gaps = 35/203 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+   +       +   +  +     T  ++     N TG +H+GH     + 
Sbjct: 25  NIPKTYDPASFERKWYEYWETHHLFHDDADESRTPYSVVIPPPNVTGQLHMGHALDNTLQ 84

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L                                  YQ+    N   +P   + G+  +
Sbjct: 85  DILVR--------------------------------YQRMRGKNVVWIPGCDHAGIATQ 112

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              +E      +       EK+L  V D+  Q   +I+   L+ L    D          
Sbjct: 113 AKVEESLRAEGTNRFELGREKFLERVWDWKQQYGDRIMYQ-LRMLGASCDWDRERFTMDE 171

Query: 268 GDPSPIRDIIDNLARQGYVYEGI 290
           G    +R++  +L  QG +Y+G 
Sbjct: 172 GCSRAVREVFVSLYEQGLIYQGT 194



 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E WL  ++D+ +   +         +   H     E    R          ++LA   + 
Sbjct: 414 ENWLENIRDWCISRQLWWG----HRIPAWHCADCGETSVSR----------EDLAACMHC 459

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
               +   +             L    T+   +  + L     + T              
Sbjct: 460 GSSRIHQDEDVLDTWF---SSALWPFETLGWPEETKDLRHFYPTSTLVT----------- 505

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +           +V +  LV   RD    KMSK  G+
Sbjct: 506 -GYD-IIFFW-------VARMVMMGLRFGGDVPFRDVFIHGLV---RDSEGRKMSKSLGN 553

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
            I    V+++ G+D++RFM++        + F + +V+    
Sbjct: 554 GIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN 595


>gi|229487403|emb|CAY54137.1| unnamed protein product [Heliconius melpomene]
          Length = 414

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 19/183 (10%)

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           +  +  +G  +V F +L  K+   +      V          ++ Y  AR  +I +   +
Sbjct: 238 KEFISHLGESAVAFDLLQAKSCSPV--KMYLVSNGGTSKGAAFILYNCARLETIIKTFNE 295

Query: 471 IFPDLDF-DLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATI------AQEPYKLA 522
              +  +  L P   I      D  E  LI  ++   P ++ N           +P+ + 
Sbjct: 296 KVDNGTYLALPPIENIDFSLLNDKDEWNLIFNYIMGLPNLLNNCVEFSETKCEFKPHLIC 355

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQLVHAVASIINSGLNIIGV 579
            +L  +      ++       R+R +      L      R+  +  + S +   L I+ +
Sbjct: 356 SFLSSMVKTISQYY------RRVRILTEPRPHLLPTLFARIHFIIILNSTLKICLRILNI 409

Query: 580 ESP 582
           +S 
Sbjct: 410 KSV 412


>gi|229815477|ref|ZP_04445809.1| hypothetical protein COLINT_02525 [Collinsella intestinalis DSM
           13280]
 gi|229809010|gb|EEP44780.1| hypothetical protein COLINT_02525 [Collinsella intestinalis DSM
           13280]
          Length = 493

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 97/291 (33%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + TR     D   QI        
Sbjct: 12  APSPTGKLHIGGARTAIYNWAFARANGGTFILRIDDTDPTRST---DENTQI-------I 61

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R  + L  +  + PE G   G Y +    +L  + +  LL           K Y     
Sbjct: 62  LRAMRWLGLDWDEGPEVGGDFGPYSQTERLDLYKQTAERLLAEG--------KAYPCFCT 113

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + +  D +A   + D F     + R       +        G  Y   +  P+++    
Sbjct: 114 PEQLAADREAAQARKDPFQG---YQRRCRDLTPEEAQARIDAGEPYVLRIKVPENRGNVV 170

Query: 302 C-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D    ++ F +  + D     L +SDG+ TY   + A        G  ++I   G DH
Sbjct: 171 INDAVHGEVTFDAKELDDF---VLFRSDGTPTY---NFATVVDDALMGITHVIR--GDDH 222

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   V  A+         +    + L  DG   K+SKR G      
Sbjct: 223 LSNTPRQVMVYEAMGAPVPTFAHIS---MILGADGK--KLSKRHGATSVEE 268


>gi|310825918|ref|YP_003958275.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308737652|gb|ADO35312.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 641

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 104/336 (30%), Gaps = 54/336 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DTL    A  GY+      I++ G +I  +A       Q  +  
Sbjct: 14  PSSDLHIGHTYTTVAADTLKRFKALQGYDAYMITGIDEHGQKIEKVAEEKGMSAQAFVDE 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
             + + E             +L      +L+   + + +  ++    +      I +   
Sbjct: 74  EAARIAEL-----------WKLMRIDHDQLIRTTDPEHMKTIQRIFKKLYDQGDIYKGKY 122

Query: 250 KALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGILP 292
           +       + F +E     G                    +    D L      +   + 
Sbjct: 123 EGWYCTPCESFWTESQIVDGKCPDCGLPVEMASEEAYFFKMSKYADRLLEHIETHPDFIK 182

Query: 293 PPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           P   K            Q   + R    +   +  D      +  D    Y +A L Y  
Sbjct: 183 PESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALPNYLSA-LGYLN 241

Query: 343 CK---YERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGM 396
            K    ER +   ++++G D    + R   +      ++      N +      L + G 
Sbjct: 242 DKPDLMERYWPANVHLVGKD----IIRFHTIYWPIMLMALDLPLPNQIYGHGWILLKGG- 296

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
             KMSK  G+ +    +  + G D++R+ +L     
Sbjct: 297 --KMSKSVGNVVNPVELAGKYGVDALRYYLLREMKD 330


>gi|91217261|ref|ZP_01254222.1| isoleucyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184604|gb|EAS70986.1| isoleucyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 1135

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+       + 
Sbjct: 642 GVDQTRGWFYTLHAIATMIFDDVAYKNVVSNGLV---LDKKGQKMSKRLGNAADPFETLK 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G D+ R+ M+   N  + L FD   + E Q K     Y  Y++    +     +    
Sbjct: 699 TYGPDATRWYMITNANPWDNLKFDLDGIGEVQRKFFGTLYNTYSFFSMYANLDHFEYKEE 758

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           D++    P       SE +T    LI  + E+         + EP
Sbjct: 759 DIELSKRPEIDRWILSELNT----LIQTVDEF-------FASYEP 792


>gi|282601150|ref|ZP_05980914.2| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570019|gb|EFB75554.1| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 464

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 137/417 (32%), Gaps = 52/417 (12%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             K  +  I          +H+G+ R  +V DTL   + + G +V   YY+         
Sbjct: 16  PQKEGEYRIYVCGPTVYNYIHIGNARPMIVFDTLRRYLEYCGNKV---YYV--------- 63

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
                          +D  + +G   G+ ++ V ++   +Y  +      E+  P V+  
Sbjct: 64  ---------SNITDIDDKLIQKGQQEGISMQEVARKFEAEYIKDSEGLNVEE--PTVRPR 112

Query: 237 SVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           + + + +II+   DL      + +  + D + R    P    + +L              
Sbjct: 113 ATEHIGEIIKIVKDLVDSGHAY-VARNGDVYFRVKSDPGYGKLSHLNLDDLESGNRTLRS 171

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +     K D     +   +       + P       +    + +A       +   N I 
Sbjct: 172 QMDDDLKEDPADFAVWKAAKPGEPYWESPWGHGRPGWHIECSAMA------RKHLGNTID 225

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +            E   A  SE           +   + +    KMSK AG+F T+R + 
Sbjct: 226 LHAGGQDLIFPHHENEIAQ-SECANGCTFSRYWMHNGFLNINNEKMSKSAGNFFTVREIA 284

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK---------ENPVFYVQYAYARCRSIF 465
           ++ G + +R+ ML       L++    ++             +N  F +++A+    ++ 
Sbjct: 285 EKYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRDNLDFAIEHAHGTDTALA 344

Query: 466 RQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR--VIENATIAQ 516
            + ++        +D DL   + +    +F       I  L++      +E A    
Sbjct: 345 AKCEEARTKFKTAMDDDLNTPDALAAVFDFVKE----INTLSDASDKATLELAAKTF 397


>gi|116669295|ref|YP_830228.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166200129|sp|A0JSV8|SYC_ARTS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116609404|gb|ABK02128.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 487

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 107/324 (33%), Gaps = 29/324 (8%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
             KV++ +  A   G  HVGH R A+  D L   + + G+ VT    + D   +I  LA 
Sbjct: 19  PGKVSLYYCGATVQGLPHVGHIRSAIAFDQLTRWLEYRGFRVTVVRNVTDIDDKI--LAK 76

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S            D    E ++   Y           Y +  ++ P  +         + 
Sbjct: 77  SALSFEPDFEEGPDDVREEEWWALAYRYEQA--FLKAYDTLGVSRPTYEPRATGHIPEMH 134

Query: 240 AMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           A+++ + D      AL+   D++     ++R      R  ID++             P +
Sbjct: 135 ALIQGLIDRGHAYPALDDSGDVYFDVRSWNRYGS-LTRQKIDDMQ----------GAPDA 183

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIY 354
               K D     L  +    G+      +     G   +     A         FD  I+
Sbjct: 184 DPRGKKDPRDFALW-KGHKEGEPTTASWVSPWGTGRPGWHLECSAMVTKYLGTEFD--IH 240

Query: 355 VMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
             G D    + +   A + A     A   +    +          KMSK  G+ ++   +
Sbjct: 241 GGGLDLRFPHHENEMAQSQAAGHAFANFWMHNGMVTY-----QGEKMSKSIGNTVSPAEM 295

Query: 414 VDEVGSDSVRFMMLWRKNSELLDF 437
           ++      VR+ +   +   +LD+
Sbjct: 296 LELASPRVVRYYLGQAQYRSVLDY 319


>gi|307721053|ref|YP_003892193.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979146|gb|ADN09181.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 647

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 83/481 (17%), Positives = 153/481 (31%), Gaps = 79/481 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
             G  H+GH     + DT+A      G +       ++ G +I   A       Q+    
Sbjct: 12  VNGEAHIGHAYTTFIADTMARYERLKGEDTFFLTGTDEHGQKIEESAEKAGKPTQEFADE 71

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +            K++  E    Y   +    E+    + K + V      I  D   
Sbjct: 72  ISATF----------KNLWDEFGISYDKFIRTTDEDHKKGVQKAFEVMYAKGDIYKDFYE 121

Query: 252 --LNIQHDIFISEDDFHRGDP-----------------SPIRDIIDNLARQGYVYEGILP 292
               +  + F  E     G+                    + +  D L    Y       
Sbjct: 122 GHYCVSCETFFPETQLIDGEFCPDCGRATSIVKEESYFFKLSNYEDKLLEH-YANHPDFI 180

Query: 293 PPKSKTTQKCDMDRKQL----LFRSTM---------VGDDVDRPLLKSDGSYTYFAADLA 339
            P+S+  +     +  L    + R++          +GDD     +  D    Y  A L 
Sbjct: 181 MPRSRANEVVSFVKGGLRDLSVTRTSFSWGVKMPKSIGDDKHVMYVWLDALLNYITA-LG 239

Query: 340 YFKCKYERGF---DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y   + +  +   D  I+ +G D    H+ Y     A   ++  +  +    +       
Sbjct: 240 YGSDEAKMNYWPAD--IHFVGKDILRFHAIY---WPAFLMSLGLELPK---HIGAHGWWT 291

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RDG   KMSK  G+ ++ + V D  G +++R+ ML R+     D DF +     + N   
Sbjct: 292 RDGE--KMSKSKGNVVSPKEVADAYGVENLRYFML-REVPFGQDGDFSQRAFIDRINSEL 348

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                    R I           DF++   +V    ++  T    ++  L  +       
Sbjct: 349 SNDLGNLLNRII----GMSGKYSDFEIDSVDVEKYHAKEITQMNTVLNSLDSF------- 397

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               + ++   YL +L  +F     +G       +V+  N +     L  V  VA+I+  
Sbjct: 398 MENLQTHR---YLEELWKLF--AIGNGVIQEYEPWVKMKNNQKDEA-LATVAVVANILAK 451

Query: 573 G 573
            
Sbjct: 452 A 452


>gi|289672021|ref|ZP_06492911.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 50

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 7  FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMI 52
              ++  L  +  +  + + +   I +E  RD  HG  ++N AM+
Sbjct: 5  IRQLIQQALTRLVTEGVLPEGLTPAIQVENARDKTHGDFASNIAMM 50


>gi|251809946|ref|ZP_04824419.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875020|ref|ZP_06283895.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251806489|gb|EES59146.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296348|gb|EFA88867.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329734647|gb|EGG70954.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 466

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 141/421 (33%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ E Y    Y       +    S+  +     + +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMHHMGEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     Q D +                 +D+L          +    
Sbjct: 128 LVDEGYAYESDGDVYFRTRQFDGYGKLS----------HQSLDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  K    +    + +AY     E G    I+ 
Sbjct: 169 EAGEQKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYH----ELGSTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            EV  D +RF M+       ++++   V                   RS   + ++ +  
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELV----------------GAARSGLERIRNSYKL 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++      + + ++SE+      +   L ++  V+++         +  + YDLA + + 
Sbjct: 325 IEEREQIASDLEEQSEYIQH---IDKILNQFETVMDD--DFNTANAVTAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|227891852|ref|ZP_04009657.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius ATCC 11741]
 gi|227866315|gb|EEJ73736.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius ATCC 11741]
          Length = 675

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 117/352 (33%), Gaps = 83/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V      ++ G +I   A ++  +       
Sbjct: 16  PSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQKAQALGMQ------- 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++ + +    L    +K++    DY  +A+  I    L  
Sbjct: 69  ----------PQEYVDKMAADIKELWKK--LEITNDKFIRTTDDYHEKAVQNIFEKLLAK 116

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I    +  + S  D      S + ++  +          ++        +   ++   
Sbjct: 117 GDIYLGKYRGWYSVSDEEYFTESQLAEVYRDEDGN------MIGGKAPSGHEVQLVEEDC 170

Query: 309 LLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERG------ 348
             F+ +   D          D   P  + +     F      DLA  +  +  G      
Sbjct: 171 YFFKMSKYADRLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSN 230

Query: 349 FDNMIYVM---------------GSDHSGYVKRLEAVAAAVSEKKAQIN----------- 382
            ++++YV                G D S + K   A    V ++  + +           
Sbjct: 231 PEHVVYVWIDALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMAL 290

Query: 383 ------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                  ++     L RDG   KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DLPLPKHIIGHGWLLMRDG---KMSKSKGNVVYPEMIVERYGLDALRYYLMR 339


>gi|195953045|ref|YP_002121335.1| glutamyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229470619|sp|B4U896|SYE_HYDS0 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|195932657|gb|ACG57357.1| glutamyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 464

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 103/339 (30%), Gaps = 62/339 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R  +     A             ++      +I         +  + 
Sbjct: 7   APSPTGYMHLGNARTGIFSYLFAR------------HHNGTFVLRIEDTDRERSTKEFED 54

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D       +   Y +    ++  +Y+ +L++     +    K+  ++      R++
Sbjct: 55  SIIEDLKWLGIEWDEFYRQSERFDIYKEYAKKLIDSG-HAYYCFCKEEDIEK----QREE 109

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A    +    +     +       D+ D L   G  Y      P  +     DM R  
Sbjct: 110 AYAQGKAYRYPGTCRHLSK------EDVEDRLK-SGESYVIRFKVPDGQIVSFEDMIRGN 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +       GD     +++SDGS  Y   +             ++I   G DH     +  
Sbjct: 163 ISINVDDFGDF---VIVRSDGSSVY---NFVAVIDDALMKITHVIR--GEDHISNTPKQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------------------- 408
            +  A+  K  +   L    V L  D    K+SKR G                       
Sbjct: 215 LIYEALGFKPPEFAHL---PVILGEDRT--KLSKRHGGVSVRFYKENGYCPEALFNYLCL 269

Query: 409 ---TLRHVVDEV--GSDSVRFMMLWRKNSELLDFDFCKV 442
              +   V  EV    ++V++  +   N     F   K+
Sbjct: 270 LGWSSEKVGKEVISKEEAVKYFDIKDINLSPAVFSHDKL 308


>gi|33303699|gb|AAP22257.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 416

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 110/344 (31%), Gaps = 76/344 (22%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V GD +A      GY V      ++ G +I   A  +               
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL--------------- 45

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +   +I  
Sbjct: 46  --NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQGDIYL 101

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +                ++D +     V   +             +  +   FR   +
Sbjct: 102 DEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFFR---M 155

Query: 317 GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------FDNMI 353
           G  VDR L   + +  +                    DLA  +  ++ G        ++I
Sbjct: 156 GKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVI 215

Query: 354 YVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV              G+++   Y K   A    V ++  + + +   ++ +  D     
Sbjct: 216 YVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPK 275

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                        KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 276 KVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 319


>gi|300214134|gb|ADJ78550.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Lactobacillus salivarius CECT 5713]
          Length = 675

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 117/352 (33%), Gaps = 83/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V      ++ G +I   A ++  +       
Sbjct: 16  PSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQKAQALGMQ------- 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++ + +    L    +K++    DY  +A+  I    L  
Sbjct: 69  ----------PQEYVDKMAADIKELWKK--LEITNDKFIRTTDDYHEKAVQNIFEKLLAK 116

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I    +  + S  D      S + ++  +          ++        +   ++   
Sbjct: 117 GDIYLGKYRGWYSVSDEEYFTESQLAEVYRDEDGN------MIGGKAPSGHEVQLVEEDC 170

Query: 309 LLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERG------ 348
             F+ +   D          D   P  + +     F      DLA  +  +  G      
Sbjct: 171 YFFKMSKYADRLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSN 230

Query: 349 FDNMIYVM---------------GSDHSGYVKRLEAVAAAVSEKKAQIN----------- 382
            ++++YV                G D S + K   A    V ++  + +           
Sbjct: 231 PEHVVYVWIDALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMAL 290

Query: 383 ------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                  ++     L RDG   KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DLPLPKHIIGHGWLLMRDG---KMSKSKGNVVYPEMIVERYGLDALRYYLMR 339


>gi|299821028|ref|ZP_07052916.1| glutamate--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816693|gb|EFI83929.1| glutamate--tRNA ligase [Listeria grayi DSM 20601]
          Length = 489

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 46/312 (14%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
           + +G+K      + +PTG +H+G+ R A+          GD +  +         +    
Sbjct: 1   MMEGSKKVRVRYAPSPTGFLHIGNARTALFNYLFAKHHGGDFIVRIED----TDAKRNVE 56

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
               +Q+N L     W   +     D     G Y       +   L ++   + L +   
Sbjct: 57  GGEESQMNNL----KWLGVEWDEGVDVPGKYGPYRQSERADIYNPLIEELLEKGLAY--- 109

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K     ++   +   +  R ++   + +      E                    QG   
Sbjct: 110 KCYCTEEELDAEREAQKARGEMPRYSGKCRHLTKEQQ-------------AEKEAQGIRP 156

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                 P  +T    D+ + ++ F S  +GD     ++K DG  TY   + A     +  
Sbjct: 157 SIRFKVPADETITFNDIVKDEVSFDSNGIGDF---VIVKKDGIPTY---NFAVAVDDHMM 210

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              +++   G DH     +   +  A   +      +      L  +    K+SKR G  
Sbjct: 211 EISHVLR--GDDHISNTPKQLMIYKAFGWEPPVFGHM-----TLIVNESRKKLSKRDGSI 263

Query: 408 ITLRHVVDEVGS 419
           I       ++G 
Sbjct: 264 IQFIEQYRDLGY 275


>gi|323440792|gb|EGA98501.1| valyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442947|gb|EGB00570.1| valyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 876

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        V    +  +         I     N TG +H+GH     + D +  +
Sbjct: 8   DPREVEAGRYEEWVKNSYFKPSEDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L  N+  +               + 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y+S                         IR     L +  D          G    +
Sbjct: 119 KEEYAS------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +  +L  +G +Y G          +    D
Sbjct: 155 KKVFVDLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|297543649|ref|YP_003675951.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841424|gb|ADH59940.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 632

 Score = 52.6 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 107/328 (32%), Gaps = 45/328 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A       ++ +  
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAKEKGMSPKEYVDG 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               + +       L  +     D++      + EE    I     +     I + + + 
Sbjct: 74  IVEWIKD-------LWKIMDISYDQFIRTTDKYHEEIVQKIF--TKLYEKGDIYKSEYEG 124

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        ++ +  +GY ++      +         D  Q  
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDFIQPE 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-------------- 356
            R   + +      +KS     + +     +  K      ++IYV               
Sbjct: 185 SRRNEMINF-----IKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYS 239

Query: 357 -GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------------MPIKMS 401
             +D   + K   A    V ++  + + ++   + +  D                  KMS
Sbjct: 240 TDND-DDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMS 298

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +  + +V + G D+VR+ +L  
Sbjct: 299 KSKGNVVDPKELVSKYGVDAVRYFLLRE 326


>gi|313893131|ref|ZP_07826708.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442484|gb|EFR60899.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 885

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWTRERFTLDDGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++   L  +G +Y G              S    + + +   L      V  + +
Sbjct: 155 YHAVREVFVKLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEDN 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVVVATTRPETMFGDVAVAVNPEDDRYKDLI 246



 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 27/170 (15%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +A    ++    +V +  LV   RD    KMSK  G+
Sbjct: 486 TGYD-IIFFW-------VARMIFMALEFEDEIPFKHVFIHGLV---RDSQGRKMSKSLGN 534

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    V+D+ G+D++RF ++        D  F   + ++  N    +            
Sbjct: 535 GINPLDVIDQFGADALRFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------ 581

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                F  ++   +  + +P   +   ++  +I     Y   +++ T   
Sbjct: 582 WNASKFVLMNLTNYDESFVPTADDLTLADQWIIQK---YNETVQSVTSNL 628


>gi|255017988|ref|ZP_05290114.1| valyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 177

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 57/195 (29%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +        +    +           +I     N TG +H+GH     + D +  + 
Sbjct: 16  PSNVEAGKYKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMK 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++    Y        ++   ++   + +  L   +S++               E  
Sbjct: 76  RMQGFD--TLYLPG-----MDHAGIATQAKVEAKLK--ESNISRYDLGRENFVDKTWEWK 126

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y+                        + IR+  + L +  D          G    ++
Sbjct: 127 EEYA------------------------EFIREQWEKLGLGLDYSRERFTLDDGLSDAVK 162

Query: 275 DIIDNLARQGYVYEG 289
            +   L  +G +Y G
Sbjct: 163 KVFVTLYNKGLIYRG 177


>gi|167766293|ref|ZP_02438346.1| hypothetical protein CLOSS21_00797 [Clostridium sp. SS2/1]
 gi|317496983|ref|ZP_07955313.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712012|gb|EDS22591.1| hypothetical protein CLOSS21_00797 [Clostridium sp. SS2/1]
 gi|291559077|emb|CBL37877.1| glutamyl-tRNA synthetase, bacterial family [butyrate-producing
           bacterium SSC/2]
 gi|316895995|gb|EFV18147.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 486

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 108/291 (37%), Gaps = 34/291 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A     +G +        D   Q+      ++   ++A
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAR---HAGGDFILRIEDTDQERQVEGAEEIIYNTLKKA 65

Query: 189 LYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             N+D         G Y++     + L  KY+ EL++  E                   +
Sbjct: 66  GMNHDEGPDIDGGVGPYVQSERQAQGLYLKYAKELIDKGEA------------YYCFCDQ 113

Query: 247 DDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + L  L ++  D+ IS  D H  + S   + +      G  Y      P   TT   D  
Sbjct: 114 ERLDTLKVKSGDVVISHYDKHCLNLSK--EEVQAKLDAGVPYVIRQNNPTEGTTSFVDEI 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             ++   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 172 YGEITVDNIELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEYLSSTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A   +K      +     L  D    K+SKR G   +   ++++
Sbjct: 224 KYNRLYDAFGWEKP-----VYIHCPLITDEEHHKLSKRKGHS-SFEDLIEQ 268


>gi|290983287|ref|XP_002674360.1| Valyl-tRNA synthetase [Naegleria gruberi]
 gi|284087950|gb|EFC41616.1| Valyl-tRNA synthetase [Naegleria gruberi]
          Length = 1007

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 50/194 (25%), Gaps = 32/194 (16%)

Query: 95  PSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           P ++           G               I     N TG +H+GH     V D +   
Sbjct: 40  PEFVEMAWYEYWHKKGYFTADANDTTKETFTIALPPPNVTGSLHIGHALTVAVQDAICRY 99

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G  V     ++ AG       ++     ++ L   D  +               E 
Sbjct: 100 HRMNGKNVLYIPGVDHAG-------IATQVVVEKQLAKQDPPVSRHEIGREKFVEKVFEW 152

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y  +++N                         LK +    D               +
Sbjct: 153 KEEYGQKIMNQ------------------------LKRIGASLDWTRECFTMDETLSVAV 188

Query: 274 RDIIDNLARQGYVY 287
           ++    +  QG +Y
Sbjct: 189 KEAFIKMYEQGIIY 202


>gi|254825910|ref|ZP_05230911.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853705|ref|ZP_05243053.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255519716|ref|ZP_05386953.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764921|ref|ZP_07074910.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258607084|gb|EEW19692.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293595148|gb|EFG02909.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514408|gb|EFK41466.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 664

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|160939618|ref|ZP_02086966.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437409|gb|EDP15173.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC
           BAA-613]
          Length = 683

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 124/404 (30%), Gaps = 63/404 (15%)

Query: 107 VSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
             GI +      K       I + S  P    H+G+    ++ D++A      GY+V  +
Sbjct: 14  KEGINHMCQDCKKPYYITTAIAYASGKP----HIGNTYEIILADSIARYKREQGYDVFFQ 69

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
              ++ G +I   A +     Q+ +    +++         +  +     DK+       
Sbjct: 70  TGTDEHGQKIEEKAEAAGVTPQEFVDKAAAEIK-------RIWDLMNTSYDKFIRTTDQD 122

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQ 283
            E +   I K    Q    I +   + L     + F +E     G        +     +
Sbjct: 123 HEAQVQKIFKKLYDQG--DIYKGYYEGLYCTPCESFFTESQLVDGKCPDCGREVKPAKEE 180

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
            Y +      P+         +  Q + R   + ++   P             DL   + 
Sbjct: 181 AYFFRMSKYAPRLIEYINEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRT 230

Query: 344 KYERG----FD--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQI 381
            +  G    FD  ++ YV                 GS    + K   A    + +   + 
Sbjct: 231 TFSWGIPVDFDPKHVTYVWLDALTNYITGIGYDCDGSSTDQFKKYWPADLHLIGKDIIRF 290

Query: 382 NVLLCELVRLYRD--------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           + +   +  +  D        G P       KMSK  G+ +    +VD  G D+VR+ +L
Sbjct: 291 HTIYWPIFLMALDVPLPKQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVL 350

Query: 428 WRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
                       +  + E+   +    +     R  S+  +  D
Sbjct: 351 HEMPFDNDGVISWELMVERMNSDLANILGNLVNRTISMSNKYFD 394


>gi|89101166|ref|ZP_01173999.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           NRRL B-14911]
 gi|89084134|gb|EAR63302.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           NRRL B-14911]
          Length = 653

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 117/371 (31%), Gaps = 130/371 (35%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V    Y+   G                    
Sbjct: 17  PSGNLHIGHAYTTVAGDAMARYKRLRGYDVM---YL--TGT------------------- 52

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK   +     V  ++  I+D    
Sbjct: 53  -----------------------DEHGQKIQQKAEEKG--VTPQEYVDEIVDGIKDLWSK 87

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP-----PPKSKTTQKCDMD- 305
           L+I +D FI            +  I   L  QG +Y G        P +S  T++  +D 
Sbjct: 88  LDISYDDFI--RTTQDRHKQVVEKIFARLLEQGDIYLGEYEGWYCTPCESYFTERQLVDG 145

Query: 306 -------------RKQLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------A 335
                         +   F+ +      DR L   + +  +                   
Sbjct: 146 NCPDCGRPVNKVKEESYFFKVSKY---ADRLLKYYEENPHFIQPESRKNEMINNFIKPGL 202

Query: 336 ADLAYFKCKYERG------FDNMIYVMGSDHSGYVKRLEAVA----AAVSEKKAQINVLL 385
            DLA  +  ++ G        +++YV     S Y+  L          ++   A ++++ 
Sbjct: 203 EDLAVSRTTFDWGVKVPDNPKHVVYVWIDALSNYITALGYGTEDDSKYLNYWPADVHLVG 262

Query: 386 CELVR---------------------------LYRDGMPIKMSKRAGDFITLRHVVDEVG 418
            E+VR                           L +DG   KMSK  G+ +    ++D  G
Sbjct: 263 KEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG---KMSKSKGNVVDPVTLIDRYG 319

Query: 419 SDSVRFMMLWR 429
            DS+R+ +L  
Sbjct: 320 LDSLRYYLLRE 330


>gi|329770195|ref|ZP_08261585.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837001|gb|EGF86645.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 666

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 116/353 (32%), Gaps = 83/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D L      SGY+       ++ G +I                 
Sbjct: 15  PSGNLHIGHAYTTVACDALTRYKKLSGYDTFFLTGTDEHGQKIQQ-------------KA 61

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +  + E  Y    +K + K          ++    K++    DY  +A+ +I    ++ 
Sbjct: 62  QEKGISEQAYVDDMIKDIKKLWKA------MDIDYSKFIRTTDDYHERAVAEIFERLVEK 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      + ++++  +   +G +  GI P       +   +  + 
Sbjct: 116 GDIYLGEYQGWYSISDEEYFTETQLQEVFRD--EEGNMIGGIAPS----GNEVKLVSEEC 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAA-----------------DLAYFKCKYERG--- 348
             F+ +      DR +   D    +                    DLA  +  ++ G   
Sbjct: 170 YFFKMSKY---ADRLVKYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKV 226

Query: 349 ---FDNMIYVM---------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                +++YV                G     + K   A    V ++  + +V+   ++ 
Sbjct: 227 KSNPKHVVYVWIDALVNYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILL 286

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    +++  G D+ R+ +L  
Sbjct: 287 MALDLPLPKKVFAHGWLLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLRE 339


>gi|229542295|ref|ZP_04431355.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326715|gb|EEN92390.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 655

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 110/343 (32%), Gaps = 74/343 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V            +         +  Q    
Sbjct: 17  PSGNLHIGHAYTTVAGDAMARYKRLRGFDV------------MFLTGTDEHGQKIQRKAK 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+      Y+  +   + D +    L    + ++   +D   +A+ KI +  L  
Sbjct: 65  EKGVTPQQ-----YVDEIVAGIQDLWKK--LEISNDDFIRTTQDRHKKAVEKIFKKLLDQ 117

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G        ++ +  + Y ++      +     
Sbjct: 118 GDIYLGEYEGWYCTPCESFFTERQLVDGKCPDCGRPVEKVKEESYFFKMGKYVDRLLQYY 177

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIY 354
           + + D  Q   R   + ++  +P             DLA  +  ++ G        ++IY
Sbjct: 178 EENPDFIQPESRKNEMINNFIKP----------GLEDLAVSRTTFDWGIKVPGDPKHVIY 227

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                 D S Y K   A    V ++  + + +   ++ +         
Sbjct: 228 VWIDALTNYITALGYGSDDDSNYRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKK 287

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ I    ++D  G D++R+ +L  
Sbjct: 288 VFAHGWLLMKDGKMSKSKGNVIDPVTLIDRYGLDALRYYLLRE 330


>gi|229159261|ref|ZP_04287285.1| Glutamyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624153|gb|EEK80955.1| Glutamyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 491

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 92/310 (29%), Gaps = 66/310 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
            DL    + +  ++                E   + G+      + +     +G +    
Sbjct: 103 LDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEEQVKGFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY       F    +    
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTYN------FAVAVDDHLM 213

Query: 351 NMIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +  V+ G DH     +   +  A      Q   +      L  +    K+SKR    I 
Sbjct: 214 EITNVLRGDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQ 268

Query: 410 LRHVVDEVGS 419
                 E+G 
Sbjct: 269 FIEQYKELGY 278


>gi|319790640|ref|YP_004152273.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317115142|gb|ADU97632.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 879

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 86/270 (31%), Gaps = 45/270 (16%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               + R  L        +  + L G+  K ++     N TG +HVGH   + + D +  
Sbjct: 12  FEDKWYRHWLEKGYFH-ADTEKVLKGEKPKFSVVLPPPNVTGVLHVGHALNSTLQDVICR 70

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
               +GYEV      + AG       ++  W  ++ L                       
Sbjct: 71  WKRMNGYEVCWVPGTDHAG-------IATQWVVEREL----------------------- 100

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
              K      +   E++L  V  +  Q   +II   LK L    D          G    
Sbjct: 101 --AKEGLTRHDVGREEFLKRVWKWKEQYGSRIINQ-LKKLGTSCDWERERFTMDEGFSRA 157

Query: 273 IRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRP 323
           +R     L ++G +Y G              S    + + ++  L + R  +VG++    
Sbjct: 158 VRRAFVTLYKEGLIYRGKRLINWCPRCHTALSDLEVEHEEEQGNLWYIRYPLVGEEGYIV 217

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           +  +         D+A      +  + ++I
Sbjct: 218 VATTRPETL--LGDVAVAVNPSDERYRHLI 245



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 87/243 (35%), Gaps = 41/243 (16%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +    + K+   +V +  LV   RD    K
Sbjct: 477 YPTDLLVTGFD-IIFFW-------VARMMMMGYHFTGKRPFADVYVHALV---RDEKGQK 525

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    +V++ G+D++RF  L    ++  D    ++ E+  E       Y + 
Sbjct: 526 MSKTKGNVIDPLEMVEKYGADTLRFT-LTALAAQGRDI---RLSERIIEG------YRHF 575

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
               ++  A+ +    D              +   +L ++  L+E  + ++ A       
Sbjct: 576 -ANKVWNVARFVLNAADAAAVEGGASTN---YAPEDLWILTKLSETAQEVDRALEGYRFN 631

Query: 520 KLAFYLY-----DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             A  +Y     +LA      +    E  + R  +   ++           +  ++   +
Sbjct: 632 DAAKAVYQFIWNELAD----WY---VEFTKHRLYKGTEQERRTA----SQVLLRVLREAM 680

Query: 575 NII 577
            ++
Sbjct: 681 KLL 683


>gi|257094115|ref|YP_003167756.1| isoleucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046639|gb|ACV35827.1| isoleucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 942

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 86/253 (33%), Gaps = 36/253 (14%)

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD-------G 329
           L R+        P       ++ ++   +  F    S ++G D +     SD        
Sbjct: 496 LHRETAALHPRTPELIEAVAKRVEVAGIEAWFALEASELLGADAEHYRKMSDTLDVWFDS 555

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
             T+ +      + +     D  +Y+ GSD   G+ +    +  A+  +     +L    
Sbjct: 556 GATHASVLRGSHRDELAYPAD--LYLEGSDQHRGWFQSSLLIGCAMDGRAPYKALLTHGF 613

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V    DG  +KMSK  G+ I  + + D +G+D +R  +     S  L      +K   + 
Sbjct: 614 VV---DGKGLKMSKSKGNVIAPQKIADTLGADILRLWVAATDYSGELSISDEILKRVVE- 669

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA----- 503
                   AY R R+  R       D D       V     E D   L +   L      
Sbjct: 670 --------AYRRIRNTLRFLLANTADFDATRDMLEV-EHWLEIDRYALAMTRQLQAQCEA 720

Query: 504 -----EYPRVIEN 511
                E+ RV+++
Sbjct: 721 DYDRFEFHRVVQS 733


>gi|329123476|ref|ZP_08252040.1| valine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327471058|gb|EGF16513.1| valine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 954

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +   I +     L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMC-RLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|321468691|gb|EFX79675.1| hypothetical protein DAPPUDRAFT_319387 [Daphnia pulex]
          Length = 558

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 76/458 (16%), Positives = 144/458 (31%), Gaps = 60/458 (13%)

Query: 90  NLYLSPSYLRKI--LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           NL++   +  K   ++   +      +N     T     +V+A P    H+GH   AV+ 
Sbjct: 13  NLFIHSKFNEKRTKVNDGSLRQFSTTKNEPYFITTPIF-YVNAEP----HIGHVYTAVLA 67

Query: 148 DTLASLMAFSGYEVTREYYIND-AGAQINTLALSVFWRYQQA------LYNNDSDLPEGY 200
           D+ A      G          D  G +I   +L       Q       L+ N  D  E  
Sbjct: 68  DSSARFHRLIGCSPVVFSTGTDEHGLKIQQASLQANKDPSQFCDQVSVLFKNALDECEIG 127

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-----QAMMKIIRDDLKALNIQ 255
           Y   Y++       +   S      ++ ++   K         +  +   +  L  L   
Sbjct: 128 YT-DYIRTTENRHKENVHSFWNILSDKGYIYKGKYEGWYCTADETFVTEDQTTLLKLPDG 186

Query: 256 HDI-----------FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            +            + SE+++         +++  L   G V   +      K+  + D+
Sbjct: 187 REQRVSTESNRPVEWFSEENYLFKLSKLRGELLKWLI-SGPVVRPVRHYNLVKSWLEQDL 245

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-----VMGSD 359
               +      +   +  P   S   Y +  A L Y         D  I+     V+G D
Sbjct: 246 VDLSVSRPRARLSWGIPVPEDPSQTIYVWLDALLNYMTVAKHSHSDKNIWPPSVHVIGKD 305

Query: 360 ----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS Y     A   A      +  ++    +         KMSK  G+ ++ +  +D
Sbjct: 306 ILKFHSIY---WPAFLLAAGFDPPKCLLVHGHWLAD-----DQKMSKTTGNVVSPQSCID 357

Query: 416 EVGSDSVRFMMLWRK-NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
              +  +R+ +L     +   +F   K+   +  N    +     RC            +
Sbjct: 358 IATATGLRYFLLHEGVPASDGNFSMTKLVRIANSNLADGIGNLVNRCC---------GKN 408

Query: 475 LDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIEN 511
           L+       V P + E   S  L+L+  L   P ++  
Sbjct: 409 LNPSQIRLAVSPSDFEACGSPGLELLDLLQRTPDIVYE 446


>gi|301299606|ref|ZP_07205867.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852793|gb|EFK80416.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 675

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 117/352 (33%), Gaps = 83/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V      ++ G +I   A ++  +       
Sbjct: 16  PSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQKAQALGMQ------- 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++ + +    L    +K++    DY  +A+  I    L  
Sbjct: 69  ----------PQEYVDKMAADIKELWKK--LEITNDKFIRTTDDYHEKAVQNIFEKLLAK 116

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I    +  + S  D      S + ++  +          ++        +   ++   
Sbjct: 117 GDIYLGKYRGWYSVSDEEYFTESQLAEVYRDEDGN------MIGGKAPSGHEVQLVEEDC 170

Query: 309 LLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERG------ 348
             F+ +   D          D   P  + +     F      DLA  +  +  G      
Sbjct: 171 YFFKMSKYADRLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSN 230

Query: 349 FDNMIYVM---------------GSDHSGYVKRLEAVAAAVSEKKAQIN----------- 382
            ++++YV                G D S + K   A    V ++  + +           
Sbjct: 231 PEHVVYVWIDALYNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMAL 290

Query: 383 ------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                  ++     L RDG   KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DLPLPKHIIGHGWLLMRDG---KMSKSKGNVVYPEMIVERYGLDALRYYLMR 339


>gi|254933016|ref|ZP_05266375.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293584575|gb|EFF96607.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328469714|gb|EGF40636.1| methionyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332310585|gb|EGJ23680.1| Methionyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 664

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|82751253|ref|YP_416994.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123547885|sp|Q2YTA0|SYV_STAAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|82656784|emb|CAI81213.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEKGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|329733231|gb|EGG69568.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|223042881|ref|ZP_03612929.1| glutamyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|314932751|ref|ZP_07840120.1| glutamate--tRNA ligase [Staphylococcus caprae C87]
 gi|222443735|gb|EEE49832.1| glutamyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|313654432|gb|EFS18185.1| glutamate--tRNA ligase [Staphylococcus caprae C87]
          Length = 484

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W       + D D   G Y       +   L  +   E   +   K     ++   +
Sbjct: 64  --KWLGLDWDESIDKDKGFGPYRQSERADIYNPLIQQLLDEDRAY---KCYMTEEELEEE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +I R ++     QH     E           R   +   R+  +       PK KT 
Sbjct: 119 REAQIARGEMPRYGGQHAHLSEEQ----------RKQFEAEGRKPSIR---FRVPKDKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G 
Sbjct: 166 SFKDMVKGEISFDSNNMGDW---VIVKKDGVPTYN------FAVAVDDHYMKISDVIRGD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|298694934|gb|ADI98156.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|294496960|ref|YP_003560660.1| glutamyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346897|gb|ADE67226.1| glutamyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 485

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 100/294 (34%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG +H+G+ R A+     A     +G  + R   I D   Q   +        RY 
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR--NQNGKFIIR---IEDT-DQKRNIEGGEESQLRYL 63

Query: 187 QALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + L    D  +  G   G Y +    E+  KY+ ELL         +       +     
Sbjct: 64  KWLGIEWDESIDVGGEYGPYRQSERTEIYQKYTEELLEKG------LAYHCYCTSEELEK 117

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             + +  N Q   +  +        +   +    L  +G         P +K  +  D+ 
Sbjct: 118 EREEQQANSQMPRYSGKC------RNLTAEQRAELEAEGREPSIRFRVPSNKEIKWNDIV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     
Sbjct: 172 KDEVSFESEGIGDF---VIVKKDGTPTY---NYAVAIDDYLMKMTHVLR--GDDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   V  A+         +      L  +    K+SKR    I       E+G 
Sbjct: 224 KQILVYEALGWTPPVFGHM-----TLIVNENRRKLSKRDESIIQFIEQYKELGY 272


>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 921

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|227529668|ref|ZP_03959717.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350458|gb|EEJ40749.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 885

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 64/212 (30%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 12  DPTAVEAGRYQWWIDQGLFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDVL-------WLPGMDHAGIATQAKVEARLRK----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++ ++ +E                II      + I  D         +G    +
Sbjct: 114 --KFVQQVWDWKDE-------------YADIIHKQWAKMGISVDYDRERFTLDKGLNKAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 159 RKVFVDLYNKGLIYRGTYIINWDPQARTALSD 190



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+ + G D++R+ ++      + + F + K+       
Sbjct: 521 LIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRWFLITGSTPGQDIRFSYTKMDA----- 575

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  A+     I       +  ++    P  V+P++S++D ++  +   L+     +
Sbjct: 576 -------AWNFINKI--WNASRYVIMNLGDMPAPVLPEKSKWDLADRWI---LSRLNATV 623

Query: 510 ENATIAQE 517
           +      E
Sbjct: 624 KQVNAQFE 631


>gi|49483906|ref|YP_041130.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|81650951|sp|Q6GG42|SYV_STAAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49242035|emb|CAG40734.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|15927242|ref|NP_374775.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283336|ref|NP_646424.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486490|ref|YP_043711.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57650536|ref|YP_186549.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160762|ref|YP_494306.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195468|ref|YP_500272.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268144|ref|YP_001247087.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394211|ref|YP_001316886.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221770|ref|YP_001332592.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509882|ref|YP_001575541.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142585|ref|ZP_03567078.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317192|ref|ZP_04840405.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732314|ref|ZP_04866479.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257794050|ref|ZP_05643029.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415754|ref|ZP_05682025.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258422009|ref|ZP_05684929.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438233|ref|ZP_05689517.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443691|ref|ZP_05692030.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258444929|ref|ZP_05693249.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258447983|ref|ZP_05696115.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451821|ref|ZP_05699843.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454309|ref|ZP_05702278.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262052238|ref|ZP_06024443.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203281|ref|YP_003282550.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893160|ref|ZP_06301394.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920205|ref|ZP_06327930.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929338|ref|ZP_06336905.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024713|ref|ZP_06379111.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848686|ref|ZP_06789432.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405975|ref|ZP_06815783.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274908|ref|ZP_06857415.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207622|ref|ZP_06924057.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245099|ref|ZP_06928976.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911704|ref|ZP_07129148.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380744|ref|ZP_07363413.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649185|sp|Q6G8R2|SYV_STAAS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81704362|sp|Q7A0P4|SYV_STAAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81781461|sp|Q99TJ8|SYV_STAAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81859571|sp|Q5HFA8|SYV_STAAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|122539344|sp|Q2FXR8|SYV_STAA8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|123485492|sp|Q2FG72|SYV_STAA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|172048932|sp|A6QHJ8|SYV_STAAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083635|sp|A6U2D1|SYV_STAA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083636|sp|A5ITI8|SYV_STAA9 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083637|sp|A8Z2I4|SYV_STAAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13701460|dbj|BAB42754.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|21204776|dbj|BAB95472.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244933|emb|CAG43394.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57284722|gb|AAW36816.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126736|gb|ABD21250.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203026|gb|ABD30836.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741213|gb|ABQ49511.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946663|gb|ABR52599.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374570|dbj|BAF67830.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368691|gb|ABX29662.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723952|gb|EES92681.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788022|gb|EEV26362.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839347|gb|EEV63820.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842053|gb|EEV66482.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848277|gb|EEV72268.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851097|gb|EEV75040.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257856137|gb|EEV79052.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858744|gb|EEV81615.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860533|gb|EEV83359.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863539|gb|EEV86298.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259159839|gb|EEW44878.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|262075571|gb|ACY11544.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941145|emb|CBI49532.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282589070|gb|EFB94171.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594553|gb|EFB99538.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764478|gb|EFC04604.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817346|gb|ADC37833.1| Valyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824712|gb|EFG41135.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968972|gb|EFG44993.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887639|gb|EFH26537.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178179|gb|EFH37427.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300887125|gb|EFK82326.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302751490|gb|ADL65667.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340743|gb|EFM06674.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830042|emb|CBX34884.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130705|gb|EFT86691.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315198642|gb|EFU28970.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140457|gb|EFW32311.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143996|gb|EFW35765.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329314337|gb|AEB88750.1| Valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728349|gb|EGG64786.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|283470931|emb|CAQ50142.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNVL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|283770729|ref|ZP_06343621.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460876|gb|EFC07966.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 38.0 bits (87), Expect = 5.2,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|282916924|ref|ZP_06324682.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319411|gb|EFB49763.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|258424081|ref|ZP_05686963.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845702|gb|EEV69734.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|253734551|ref|ZP_04868716.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253727492|gb|EES96221.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|282911292|ref|ZP_06319094.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324987|gb|EFB55297.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312437877|gb|ADQ76948.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|257425780|ref|ZP_05602204.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428446|ref|ZP_05604844.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431080|ref|ZP_05607457.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433763|ref|ZP_05610121.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436679|ref|ZP_05612723.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282904236|ref|ZP_06312124.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906061|ref|ZP_06313916.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908976|ref|ZP_06316794.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282914461|ref|ZP_06322247.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919430|ref|ZP_06327165.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924807|ref|ZP_06332473.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958416|ref|ZP_06375867.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503539|ref|ZP_06667386.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510553|ref|ZP_06669258.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537096|ref|ZP_06671776.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428236|ref|ZP_06820865.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590801|ref|ZP_06949439.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|257271474|gb|EEV03620.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275287|gb|EEV06774.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278028|gb|EEV08676.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281856|gb|EEV11993.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284030|gb|EEV14153.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313173|gb|EFB43569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317240|gb|EFB47614.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321642|gb|EFB51967.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282327240|gb|EFB57535.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331353|gb|EFB60867.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595854|gb|EFC00818.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790565|gb|EFC29382.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919941|gb|EFD97009.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095205|gb|EFE25470.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466444|gb|EFF08965.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295127636|gb|EFG57273.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575687|gb|EFH94403.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|315195567|gb|EFU25954.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|89890000|ref|ZP_01201511.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89518273|gb|EAS20929.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 1136

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 61/166 (36%), Gaps = 19/166 (11%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +S+  A  NV+   LV    D    KMSKR G+       + 
Sbjct: 644 GVDQTRGWFYTLHAIATMISDDVAYKNVVSNGLV---LDKNGQKMSKRLGNAADPFETLG 700

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + G+D+ R+ M+   N  + L FD   + E Q K     Y  Y++         A     
Sbjct: 701 KYGADATRWYMVSNANPWDNLKFDLDGITEVQRKFFGTLYNTYSFFSLY-----ANVDGF 755

Query: 474 DLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEP 518
                  P    P+   +  SEL  LI     +           EP
Sbjct: 756 TYSEANIPLEERPEIDRWVLSELNTLIKDTTAF-------YEDYEP 794


>gi|78042984|ref|YP_361145.1| glutamyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|115298497|sp|Q3A9N9|SYE_CARHZ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|77995099|gb|ABB13998.1| glutamyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 480

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 103/284 (36%), Gaps = 42/284 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A     +G  + R   I D       L  S     +  
Sbjct: 7   APSPTGPLHIGGARSALFNYLFAR--KNNGVFIVR---IED-----TDLERSSRESEKNI 56

Query: 189 LYNN-------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           L +        D  +  G   G Y +    +L  KY+ +L+   EE +      +  +  
Sbjct: 57  LESLKWLGITWDEGIEVGGENGPYRQTERLDLYQKYAQKLI---EEGFAYYC--FCTEEE 111

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  R +L A   +   ++ +        +   +  +    +G         P  +T   
Sbjct: 112 LEEERKNLLAKG-EMPRYLGKC------RNLTPEQKEKYLAEGRKPTVRFKVPAGRTIVI 164

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R  + F +  +GD +   ++KSDG  TY   + A        G  +++   G +H 
Sbjct: 165 NDLVRGVVSFETDGIGDFI---IVKSDGIPTY---NFAVVIDDVTMGITHVLR--GEEHL 216

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               R   +  A+  K  +        + L       KMSKR G
Sbjct: 217 SNTPRQILIYEALGFKIPEFAH-----ISLILGKDRTKMSKRHG 255


>gi|15924653|ref|NP_372187.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156979981|ref|YP_001442240.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006449|ref|ZP_05145050.2| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|81774901|sp|Q931Q1|SYV_STAAM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|166225533|sp|A7X383|SYV_STAA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14247435|dbj|BAB57825.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722116|dbj|BAF78533.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|329727331|gb|EGG63787.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 876

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L  +G +Y G          +    D
Sbjct: 160 DLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 38.0 bits (87), Expect = 5.1,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|154248247|ref|YP_001419205.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154162332|gb|ABS69548.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 550

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 102/325 (31%), Gaps = 35/325 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D +A      GY+V      ++ G ++   A       ++ L  
Sbjct: 48  PNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQTAQKAGVTPRELLAR 107

Query: 192 NDSDLP----------EGYYPGVYLKHVGKELA---------DKYSSELLNFPEEKWLPI 232
           N               + +      +H     A         D Y S    +   +    
Sbjct: 108 NVPRFEAMVEAFNLSIDDFIRTTQERHHASSQAIWAKMAANGDIYKSTYAGWYSVRDEAY 167

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVY---- 287
             +   Q   + IR   +   ++   ++ E+ +     +    ++   A   G++     
Sbjct: 168 YAEDETQLNEQGIRLGPQGTPVE---WVEEESYFFRLSAYQDRLLAYYAENPGFIMPEAR 224

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY---FKCK 344
              +    S       + R    +   + GDD     +  D    Y  A L Y       
Sbjct: 225 RNEVVSFVSGGLTDLSISRTTFDWGIPVPGDDKHIMYVWVDALTNYITA-LGYPDTEAEL 283

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           ++R +   ++V+G D    + R  AV        A +          +      KMSK  
Sbjct: 284 FKRFWPANLHVIGKD----IIRFHAVYWPAFLWSAGLEAPKRVFGHGFLFNRGEKMSKSV 339

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ I    +    G D++R+  L  
Sbjct: 340 GNVIDPFDLAATYGVDAIRYFFLRE 364


>gi|77406180|ref|ZP_00783251.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175220|gb|EAO78018.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 883

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNRGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDARYKDLI 243


>gi|193216883|ref|YP_002000125.1| glutamyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|238692480|sp|B3PN19|SYE_MYCA5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|193002206|gb|ACF07421.1| glutamyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 464

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 114/361 (31%), Gaps = 83/361 (22%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L      +V R        +Q+N LA 
Sbjct: 10  APSPTGYLHIGGARTALFCYLFAKHSNGDFIFRLEDT---DVER-NVEGGEASQLNNLAW 65

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +     +   Y  EL+           K Y   
Sbjct: 66  L-------GIVPDESPLKPNPKYGKYRQSEKLAIYQAYIDELIKQGL-----AYKAYDSS 113

Query: 240 AMMKIIRDDLKALNI---QHD---IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +    ++ +   +   ++D   + +SE +  R D +               Y   L  
Sbjct: 114 EELAKQHEEQEKAGVASFRYDPTWLKLSESEIKRRDEAK-------------EYSIRLKL 160

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           PK+K     D+ R  +   S  +GD     ++KSDG  TY   + A     ++    +++
Sbjct: 161 PKNKNYSWDDLVRGPISVNSDDIGDF---VIMKSDGYPTY---NFAVVVDDHQMDITHVL 214

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              G +H     +  A+  A               + +  +    K+SKR          
Sbjct: 215 R--GEEHITNTPKQLAIYEAFGWDNPVFGH-----LTIITNMEGKKLSKRDKSLKQFIED 267

Query: 414 VDEVGS--------------------------DSVRFMMLWRKNSELLDFDFCKVKEQSK 447
               G                           + ++     R +     FD  K++  SK
Sbjct: 268 YKNEGYCPEAIFNFLALLGWTSGDKTEIMSHDELIKKFDYNRLSKSPSKFDIVKMEWFSK 327

Query: 448 E 448
           +
Sbjct: 328 Q 328


>gi|164688857|ref|ZP_02212885.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
 gi|164602061|gb|EDQ95526.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
          Length = 648

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 107/331 (32%), Gaps = 50/331 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D +A    F GY+V      ++ G +I   A        + L  
Sbjct: 15  PSGRLHIGHTYTTVATDAIARFKRFCGYDVRFLTGTDEHGEKIQKKAKEAGMTEMEYLDG 74

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
             +D+ +             +  D    + +   E +   I++     +     I + + 
Sbjct: 75  MIADIKKL-----------WKTMDISYDDFIRTTEPRHTKIIQKIFTKLYEQGDIYKGEY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDP--------------------SPIRDIIDNLARQ-GYVY 287
           +       + F +E     GD                     S   D I  L +   Y +
Sbjct: 124 EGRYCTPCESFWTESQLVDGDKCPDCGRETYVAKEEAYFFKLSKYEDRIKELFKNPNYCF 183

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFK 342
                        +  ++   +   +   G     D+     +  D    Y  A L Y  
Sbjct: 184 PEARANEMIANFLEPGLEDLCVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITA-LGYMS 242

Query: 343 C---KYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                +++ +   I V+G +    +     A+  A+    ++  V     +    D    
Sbjct: 243 EDDSLFKKYWPANIQVVGKEIIRFHTIIWPALLMALDLPVSK-QVFGHGWILFAND---- 297

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ +    +++  G D++++ +L  
Sbjct: 298 KMSKSKGNIVYPEQMIERYGIDTLKYYLLRE 328


>gi|226222806|ref|YP_002756913.1| methionyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254992034|ref|ZP_05274224.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|225875268|emb|CAS03965.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 664

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|50083317|ref|YP_044827.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81394060|sp|Q6FG02|SYI_ACIAD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49529293|emb|CAG67005.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 945

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 96/284 (33%), Gaps = 37/284 (13%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             I R     + I   +    ++ H   P  I ++   +  +G          ++K    
Sbjct: 475 WCISRQRTWGVPIPFFVHKDTNELHPRTPELIEEVAQLIEHEGI---DAWFNREAKDFIG 531

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D +    +  +  V  D         G+  Y     A  + + E      +Y+ GSD  
Sbjct: 532 ADAEHYNAVRDTLDVWFDS--------GTTHY-----AVLRQREELTDPADLYLEGSDQH 578

Query: 362 -GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+ +     + A++E+     +L    V    D    KMSK  G+ IT + ++ ++G+D
Sbjct: 579 RGWFQSSLLTSIAINERAPYKGLLTHGFVV---DEKGRKMSKSLGNIITPQDIIKDMGAD 635

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFD 478
            +RF +    +    +    K       +        Y R R+  R   A         D
Sbjct: 636 GLRFWIAS--SDYRYEMTAGKEIFSRASD-------GYRRIRNTLRFLLANLNGFTPSTD 686

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
             P + +    ++      ++   AE  + ++ A      + + 
Sbjct: 687 ALPVDQLIALDQY------ILQRAAEVQKTVQQAYEDMNFHIVC 724


>gi|313893365|ref|ZP_07826939.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442134|gb|EFR60552.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 484

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 114/334 (34%), Gaps = 64/334 (19%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           MH+GH  C  V DT+A     +GY+V      ++ G +I         R   A      +
Sbjct: 1   MHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKI--------QRAAAAEGITPLE 52

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDLKALN 253
                  G         ++   + + +   +E+   +V++   +A  K  I + + +   
Sbjct: 53  YTTNIVNGFKALWEKMHIS---NDDFIRTTDERHEKVVQELFTKAYEKGDIYKAEYEGWY 109

Query: 254 IQHDIFISEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              D     +   +  P+         ++ +  + Y ++      +     + + D  Q 
Sbjct: 110 CTPDETFWTE--QKLGPNHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPDFIQP 167

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM------- 356
             R   +   V + L            DLA  +  ++ G    FD  +++YV        
Sbjct: 168 ESRRNEMIQFVKQGL-----------EDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNY 216

Query: 357 -------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-------------- 395
                    D   Y K   A    V ++  + + ++  ++ +  +               
Sbjct: 217 ISALSPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIV 276

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ I    ++D  G+DS+R+ +L  
Sbjct: 277 DGTKMSKSLGNVIDPIPLIDTYGADSLRYYLLSE 310


>gi|86609674|ref|YP_478436.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558216|gb|ABD03173.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 518

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 75/484 (15%), Positives = 156/484 (32%), Gaps = 80/484 (16%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +V D +A      G +V      ++ G +I   A       Q
Sbjct: 14  YVNAAP----HIGSAYTTLVADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEERGIPPQ 69

Query: 187 QALYNNDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           Q      +   +           +++                  ++  + I +      +
Sbjct: 70  QHCDEIAAQFAQLWQLLDIRYDRFIRTTNPRHKAIVREFFQRVWDQGDIFIGRQQGWYCV 129

Query: 242 -MKIIRDDLKALNIQHD--------IFISEDDFHRGDPSPIRDIIDNLARQ--------- 283
             +  +D+ + L              +  E+++        ++ ++ L  +         
Sbjct: 130 ACEEFKDEAELLEGGFCPLHPTKKVEWKDEENYFFRLS-RYQEKLEALYAEHPEFIQPES 188

Query: 284 ------GYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
                  +V +G+     S+ +    +    D  Q L+       +     L  D   T 
Sbjct: 189 RRNEVINFVKQGLRDFSISRPSVSWGIPFPADPGQTLYVWFDALINYISAALDPDDEPT- 247

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
               LA    +Y    D  ++++G D    H+ Y     A+  +      +         
Sbjct: 248 ----LANALRRY-WPAD--VHLVGKDIVRFHAIY---WPAMLMSAGLPLPKQVFGHGF-- 295

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFD---FCKVKEQ 445
            L +DG  +KMSK  G+ +    +V + G+D+VR+  L   +  +  DF    F  V   
Sbjct: 296 -LTKDG--LKMSKSLGNTVDPFELVQQYGADAVRYYFLTEIELGKDGDFSEGRFVDVLNA 352

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              N +  +     R  ++ R+ +  +        P   IP +         L   LA  
Sbjct: 353 DLANDLGNLL---NRTLNMLRKYQSDYR------VPAVGIPADHPL----KTLAERLA-- 397

Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           P  + +A    +P   A     LA   + +     + P     Q  N ++  +   ++ +
Sbjct: 398 P-AVADAYERLDPSSAARKALSLAQASNKYLD--EQAPWTLHKQGQNERVAQILYAVLES 454

Query: 566 VASI 569
           V  +
Sbjct: 455 VRWV 458


>gi|46906409|ref|YP_012798.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|67461803|sp|Q724N6|SYM_LISMF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46879673|gb|AAT02975.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 665

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|16802223|ref|NP_463708.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500370|ref|ZP_03668719.1| methionyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503503|ref|ZP_03671810.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829268|ref|ZP_05233955.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254832524|ref|ZP_05237179.1| methionyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254901038|ref|ZP_05260962.1| methionyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913894|ref|ZP_05263906.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938315|ref|ZP_05270012.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255026302|ref|ZP_05298288.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|255029121|ref|ZP_05301072.1| methionyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|25009372|sp|Q8YAF2|SYM_LISMO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16409534|emb|CAC98392.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|258601679|gb|EEW15004.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610927|gb|EEW23535.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293591911|gb|EFG00246.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 664

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|322377722|ref|ZP_08052212.1| valine--tRNA ligase [Streptococcus sp. M334]
 gi|321281487|gb|EFX58497.1| valine--tRNA ligase [Streptococcus sp. M334]
          Length = 883

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 69/238 (28%), Gaps = 35/238 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERLRGEGIS------------------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++        I++    + +  D          G    +
Sbjct: 105 -------RYDLGRESFLTKVWEWK-DEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           R +  +L ++G++Y G          +    D +  +    + G       +  DGS+
Sbjct: 157 RKVFVDLYKKGWIYRGEFIINWDPAARTALSDIE--VIHKDVEGAFYHMNYMLEDGSH 212


>gi|313676555|ref|YP_004054551.1| isoleucyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943253|gb|ADR22443.1| Isoleucyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 1120

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A++  + +  A  NV+   LV    D    KMSKR G+ I     + 
Sbjct: 625 GVDQTRGWFFTLHAISGMLFDSVAYKNVIANGLV---LDKEGNKMSKRLGNAINPFETIK 681

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G D+ R+ M+   N  + L F+   V+E  ++     +Q  Y            ++ +
Sbjct: 682 KYGPDATRWYMIANANPWDNLKFNLQGVEEVQRKF-FGTLQNTY--------NFFALYAN 732

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           LD   F    IP E   ++    ++  L    + ++ A    EP + A 
Sbjct: 733 LDGFTFEGESIPLEKRTESDRW-ILSKLNSLKKAVDVAYDDYEPTRAAR 780


>gi|221633490|ref|YP_002522715.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221157072|gb|ACM06199.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 892

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +   +        I     N TG +H+GH     + D +    
Sbjct: 16  PQTVEARWYDWWEQRGYFTPAIDWNRKPFVIIMPPPNVTGELHMGHALFVAIEDLMIRWR 75

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++  W  ++ L                         
Sbjct: 76  RMQGYPTL-------WLPGADHAGIAGQWVVERELL------------------------ 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   EK+L  V D+ +      IR+ L+ L    D          G    +R
Sbjct: 105 -KEGLTRHDLGREKFLERVWDW-MNRYRGRIREQLRILGASCDWTRFRFTMDPGPSRAVR 162

Query: 275 DIIDNLARQGYVYEG 289
                L  +G +Y G
Sbjct: 163 TAFKRLYDKGLIYRG 177



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 77/256 (30%), Gaps = 48/256 (18%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF      E G+D +++   +        +      + E       L        
Sbjct: 476 TDDLRYFYPGSVMETGYD-ILFFWVAR------MVFLGLEFMGEVPFYTVYLHGT----V 524

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    +MSK  G+ I    V  + G+D++RF ++        D      + ++  N   
Sbjct: 525 RDERGQRMSKTKGNVIDPTEVTQQYGADALRFTLVTMAGPG-TDMKLSLNRVEASRNFAN 583

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
            +  A      +     +I    D  +            + S + L     L+   RV  
Sbjct: 584 KIWNATRYTLRVLA-GGEIEQAPDGSVVSP---------ERSAMSLADRWILSRLERVTT 633

Query: 511 NATIAQEPYKLAFY--------LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
             T   E      Y        LYD L S F   +           + A +      R  
Sbjct: 634 EVTDQLE-----RYQFHEAGHLLYDFLWSQFCDWY----IEASKVAINAGDPGARAARQT 684

Query: 562 LVHAVASIINSGLNII 577
           L +    ++   L ++
Sbjct: 685 LAY----VLERALRLL 696


>gi|47096170|ref|ZP_00233769.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284803084|ref|YP_003414949.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996225|ref|YP_003417993.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|47015418|gb|EAL06352.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284058646|gb|ADB69587.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061692|gb|ADB72631.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 665

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 962

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 119/347 (34%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL   EE KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 456 EAFRKELLQAVEETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 510

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 511 DPIITDETINHVADLFRENGSNVWFEREAKDLLPEGFTHPSSPNGEFRKETDIMDVWFDS 570

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 571 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 610

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 611 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 667

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR    +    DF+     V   E    
Sbjct: 668 SDVRISDDILKQVAE---------VYRKIRNTFRFL--LGNLADFNPSQDAVAKAELREV 716

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 717 DR-----YMLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFC 751


>gi|172056076|ref|YP_001812536.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171988597|gb|ACB59519.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 651

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/365 (13%), Positives = 110/365 (30%), Gaps = 118/365 (32%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      G++V                      RY      
Sbjct: 14  PSAKLHIGHAYTTVAGDAMARYKRLQGFDV----------------------RYLTGT-- 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    +E  +   +   V  +++ I+     
Sbjct: 50  -----------------------DEHGQKIQEKAKEAGVS--EQEFVDGVVEQIKVLWDR 84

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L+I +D +I            +  + + L  +G +Y G      S   +    + + +  
Sbjct: 85  LDISYDDYI--RTTEPRHKEVVERVFETLLEKGDIYLGEYEGWYSVPDETYYTESQLVDG 142

Query: 312 RSTMVG----------------DDVDRPLLKSDGSYTYFAA-----------------DL 338
           +S   G                   DR +   + + ++                    DL
Sbjct: 143 KSPDSGHPVELVREECYFFRISQYADRLVEYYEANPSFILPESRKHEMINNFIKPGLQDL 202

Query: 339 AYFKCKYERG------FDNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKK 378
           A  +  ++ G        +++YV              G+D  G   +   A    V ++ 
Sbjct: 203 AVSRTTFDWGVKVPSNPKHVVYVWVDALTNYISSLGYGTDDQGNFDKYWPADVHLVGKEI 262

Query: 379 AQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + ++   + +  D                  KMSK  G+ +    ++D  G D++R+
Sbjct: 263 VRFHTIVWPALLMALDLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVPMIDRYGLDALRY 322

Query: 425 MMLWR 429
            +L  
Sbjct: 323 YLLRE 327


>gi|73667420|ref|YP_303436.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|72394561|gb|AAZ68838.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 506

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 108/332 (32%), Gaps = 41/332 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D +A  M   GY V      ++ G ++   A        +      +  
Sbjct: 18  HIGHVYTTLISDIIARFMRLDGYNVKFVTGTDEHGQKVEKAAQERNISLLEFTNGTSAVF 77

Query: 197 PE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMK 243
            +      Y    +++          ++   +  +   + +        V+D +     +
Sbjct: 78  RQLADVMNYSYNDFVRTTEMRHKKAVTALWTSLCDNDMVYLGSYSGWYSVRDEAFYQEKE 137

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ------GYVYEGILPPPKSK 297
           +I  D KA       +I E  +          ++             Y Y  ++   KS 
Sbjct: 138 LI--DGKAPTGAEVEWIEEPSYFFRLSDFQEKLLTFYEEHPDFIIPKYRYNEVISFVKS- 194

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYERGFDN-- 351
             +   + RK +++   +  DD     +  D    Y       D+     +   G DN  
Sbjct: 195 GLKDLSVSRKNVVWGIKVPNDDEHVIYVWVDALANYLTVLGFPDVKSKDYQTYWGNDNST 254

Query: 352 MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +++V+G D    H+ Y     A+  A      +  +               K+SK  G+ 
Sbjct: 255 VLHVVGKDILRFHAVY---WPAILMAAGLPLPKKILAHGWWTN-----EGQKISKSLGNI 306

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFD 438
           I    +V+E G D +R+ ++         DF 
Sbjct: 307 IKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFK 338


>gi|291541997|emb|CBL15107.1| methionyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 648

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 70/499 (14%), Positives = 145/499 (29%), Gaps = 115/499 (23%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S NP    H+GHC   V  D++A      GY+V                 + +    +
Sbjct: 15  YPSGNP----HIGHCYTTVACDSIARYRRMQGYDV-----------------MFLTGTDE 53

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             L        +G  P  Y+  + K    K   + +N   ++++    DY ++ + KI +
Sbjct: 54  HGLKIEQKAAEKGVTPKEYVDEIVKTF--KGLWKFMNISYDRYIRTTDDYHIETVQKIFK 111

Query: 247 DDLKALNIQHDIFIS-------------------------------EDDFHRGDPSPIRD 275
           +      I    +                                 E+ +          
Sbjct: 112 ELYDKGYIYKGEYKGKYCTPCESFWTESQLIDGKCPECGREVTEAKEEAYFFKMSPFADR 171

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGS 330
           I   L    Y+              K  ++   +   +   G     D+     +  D  
Sbjct: 172 IEKLLTETDYLQPKTRAVELVNNFIKPGLEDLCVSRTTFKWGIPVTFDEKHIVYVWVDAL 231

Query: 331 YTYFAADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
             Y +A L Y   K++  FD      ++++  D    + R  A+          + +   
Sbjct: 232 SNYISA-LGYKNEKFDE-FDKYWPADVHMVAKD----IMRFHAIIWPAMLMALDLPLPKH 285

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
             V  +      KMSK  G+ +    + +  G+D++R+ ++                   
Sbjct: 286 LAVHGWITFNGQKMSKSLGNVVDPFVLGERYGADAIRYHIMRE--------------MAL 331

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFDTSELQLI---- 499
             +  F  +    R  S               +  +     +P E E    +  LI    
Sbjct: 332 GADSAFSNEIMINRINSDLANGLGNLVSRTVAMVQKYFGGTLPTERESGEFDDDLIETAT 391

Query: 500 ---VHLAEYPR--VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554
                + ++     ++NA            ++ L S  + +      +    +V A + +
Sbjct: 392 SLRAKVDDFMDKTQLQNALAE---------IFKLVSRANKY-----IDETAPWVIAKD-E 436

Query: 555 LTMMRLQ-----LVHAVAS 568
               RL      L+ A+  
Sbjct: 437 TKKARLATVLYNLLEAIRI 455


>gi|160893725|ref|ZP_02074509.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
 gi|156864710|gb|EDO58141.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
          Length = 678

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 118/365 (32%), Gaps = 63/365 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A    F+GY+V  +   ++ G +I   A   
Sbjct: 9   TTAIAYASGKP----HIGNTYEIVLADSIARYKRFAGYDVRFQTGTDEHGQKIENKAFEN 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++ +       +  +     DK+        E +   I +    Q  
Sbjct: 65  MQTPKEFVDEISGEIKD-------IWDLMNTSYDKFIRTTDADHERQVQKIFRKLYDQG- 116

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I + +         + F ++     G        +     + Y ++      +     
Sbjct: 117 -DIYKGEYVGKYCTPCESFFTDSQLVDGKCPDCGRPVQEAKEEAYFFKLSKYQDRLMKHI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           + + D  Q   R   + ++  +P             DL   +  ++ G    FD  ++IY
Sbjct: 176 EQNPDFIQPESRKNEMINNFIKP----------GLQDLCVSRTSFKWGIPVDFDDKHVIY 225

Query: 355 VM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           V                 G++   Y K   A    + +   + + +    + L   G+P+
Sbjct: 226 VWIDALSNYITGLGYDVDGNNDELYKKYWPADLHLIGKDILRFHTIYWP-IMLMALGVPL 284

Query: 399 ---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
                          KMSK  G+ +    +V   G D+VRF +L            +  V
Sbjct: 285 PKQIFGHPWLIQNDGKMSKSKGNVMYADDMVRLFGVDAVRFFVLHEMPFENDGIISWELV 344

Query: 443 KEQSK 447
            E+  
Sbjct: 345 VERIN 349


>gi|71894019|ref|YP_279465.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|90101532|sp|Q4A917|SYV_MYCHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71852146|gb|AAZ44754.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 822

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 37/184 (20%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               +           +I     N TG +H+GH   A + D+L       G++V     +
Sbjct: 19  QKKGFFIAPKQTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSV 78

Query: 168 NDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
           + AG   Q+                  + DL +       LK       +++  +  ++ 
Sbjct: 79  DHAGIATQVKV----------------EEDLAKKGIKKSDLKR------EEFIKKCYHWK 116

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E+++L              I++    L I +D         +     + D    L  +  
Sbjct: 117 EKQYLK-------------IKEQWDKLGICYDFSKERFTLDQDAQIAVSDFFIKLWEKNL 163

Query: 286 VYEG 289
           +Y G
Sbjct: 164 IYRG 167


>gi|308473328|ref|XP_003098889.1| CRE-EARS-2 protein [Caenorhabditis remanei]
 gi|308268028|gb|EFP11981.1| CRE-EARS-2 protein [Caenorhabditis remanei]
          Length = 484

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 100/302 (33%), Gaps = 44/302 (14%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            +       +V + F + +PTG +H+G  R A      A      G +        D   
Sbjct: 1   MKTTDILRQRVRVRF-APSPTGHLHIGGLRTAFFNYLFA---KKHGGDFILRIEDTDRAR 56

Query: 173 QINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            +  LA    +   +    N  + P EG   G Y +    +L  + + +L+++       
Sbjct: 57  FVEDLAQDKIYEALRFYNLNTDEGPREGGQYGPYEQSKRLDLYQEAAHQLVDYGHAYRC- 115

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +  +  + ++R   +              + R   +   +    +A  G       
Sbjct: 116 ----FCPEHRLDLLRKTAEKRGEIP-------KYDRKCANLTVENAKKMAENG------- 157

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVG------DDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                K   +  +D++ + F+  + G      D+ D  LLKSDG  TY    LA      
Sbjct: 158 ----EKFVIRFKLDKQNVQFQDEVFGTVNQCIDESDPVLLKSDGFPTYH---LANVIDDR 210

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    ++I   G +      + + +  A +    +        + L       K+SKR  
Sbjct: 211 KMEISHVIR--GMEWLSSTGKHQILYKAFNWTPPKFVH-----LSLIMRSATKKLSKRDK 263

Query: 406 DF 407
           D 
Sbjct: 264 DA 265


>gi|240079964|ref|ZP_04724507.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268596104|ref|ZP_06130271.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268549892|gb|EEZ44911.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 929

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 63/367 (17%), Positives = 113/367 (30%), Gaps = 56/367 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVI 509
                 +Y R R+            DF+     V   E  E D   L L   L       
Sbjct: 654 ------SYRRIRNTLSFLFANLS--DFNPIEDAVPQAEMVEIDRYALVLARQLQ------ 699

Query: 510 ENATIAQEPYKLAFYLYDLA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           E       P     Y +  A               +    ++ RL   +A++R     + 
Sbjct: 700 ERVAGDFYP----RYAFHFAVKEMVSFCSEDLGAFYLDILKD-RLYTTKADSRARRSAQT 754

Query: 561 QLVHAVA 567
            L H   
Sbjct: 755 ALYHITR 761


>gi|18311506|ref|NP_563440.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|25009370|sp|Q8XHG1|SYM_CLOPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18146190|dbj|BAB82230.1| methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 645

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 117/348 (33%), Gaps = 78/348 (22%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    +H+G+    V  D +A     +G+EV      ++ G +I  +A        
Sbjct: 14  YPSTN----LHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE------ 63

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +
Sbjct: 64  -----------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFK 110

Query: 247 DDLKALNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 +I  D +             E     G+       ++    + Y ++      +
Sbjct: 111 KLYDQGDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADR 170

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD- 350
                +   D  Q   R   + ++  RP             DL   +  +  G    FD 
Sbjct: 171 LIQYIEEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDE 220

Query: 351 -NMIYVM-------------GSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++IYV              G +    Y K   A    + +   + + +   ++ +    
Sbjct: 221 KHVIYVWIDALSNYITALGYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGL 280

Query: 396 M--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                            KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 281 ELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|325285980|ref|YP_004261770.1| Isoleucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321434|gb|ADY28899.1| Isoleucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 1133

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 64/291 (21%), Positives = 104/291 (35%), Gaps = 46/291 (15%)

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           SVQ + + +   + A  ++ DIF   +DF  GD S   +  D +     + + I     S
Sbjct: 538 SVQELKEEMAKAVAAGVLEKDIF---EDFVVGDMS--EENYDKIDLHKNIVDQITLVSAS 592

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
               K + D   + F S  +              + Y   +            D +    
Sbjct: 593 GKPMKRESDLIDVWFDSGSMPY----------AQWHYPFENKELIDENKAYPADFIAE-- 640

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A++  V +  A  NV+   LV L +DG   KMSKR G+ +     ++
Sbjct: 641 GVDQTRGWFYTLHAISTMVFDSVAYKNVVSNGLV-LDKDGK--KMSKRLGNAVDPFETMN 697

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G D+ R+ M+   N  + L FD   + E  ++          F+  YA     S   +
Sbjct: 698 QFGPDATRWYMISNANPWDNLKFDLEGIAEVKRKFFGTLYNTYSFFALYANIDKFSYSEK 757

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                   D  L  R  I Q    +     LI         ++ A    EP
Sbjct: 758 --------DVALNERPEIDQWILSELH--TLINK-------VDQAYADYEP 791


>gi|291520365|emb|CBK75586.1| methionyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 657

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 65/406 (16%), Positives = 121/406 (29%), Gaps = 65/406 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      GY+V  +   ++ G +I   A   
Sbjct: 10  TTAIAYTSGKP----HIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELKAAEA 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ + N    +         +  +     DK+        E++   I K    +  
Sbjct: 66  GITPKEFVDNVSGQVKS-------IWDLMNTSYDKFIRTTDEDHEKQVKKIFKKLYDKG- 117

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQG 284
             I +   + L     + F +E     G                    +    D L    
Sbjct: 118 -DIYKSSYEGLYCTPCESFWTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADKLIDYI 176

Query: 285 YVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +   + P   K            Q   + R    +   +  D      +  D    Y 
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 335 AADLAYFKC-------KYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
              + Y          K     D  ++++G D    H+ Y         A+     +   
Sbjct: 237 TG-IGYECDGESSDQFKALWPAD--LHLIGKDIIRFHTIY---WPIFLMALDLPLPKQVF 290

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
               L+    DG   KMSK  G+ I    +VD  G D+VR+ +L            +  +
Sbjct: 291 GHPWLLTKSADGGDDKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGAISWPLM 350

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
            E+   +    +     R  S+  +        K +  ++D DL  
Sbjct: 351 VERVNSDLANTLGNLVNRTISMSNKYFGGVVEDKGVAEEVDADLKA 396


>gi|228937390|ref|ZP_04100036.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970276|ref|ZP_04130935.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976846|ref|ZP_04137258.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782816|gb|EEM30982.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789385|gb|EEM37305.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822223|gb|EEM68205.1| Glutamyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 491

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 97/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 70

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    E  D Y    L+  E                  + 
Sbjct: 71  WLGMDWDEGVDVGGEFGPYRQ---TERLDIYKKLYLDLLERGLAYKC----------YMT 117

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +  I   E   + G+      + +     +G +       P ++     D+ 
Sbjct: 118 EEELEAEREGQISRGETPRYAGNHRDLTEEQMKEFEAEGRIPSIRFRVPANRDYTFKDIV 177

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 178 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 229

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 230 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 278


>gi|218133173|ref|ZP_03461977.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992046|gb|EEC58050.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC
           43243]
          Length = 893

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    +    +   +        I     N TG +H+GH     + D L   
Sbjct: 10  DPSAIEDRLYQKWLDKKYFHAEVDRSKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRF 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE              +  ++S   +   AL     D  E    G   +    E 
Sbjct: 70  KRMQGYEAL-------WIPGTDHASISTEVKVINALKEEGIDKNELGREGFLKRT--WEW 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y   + +                         LK +    D          G    +
Sbjct: 121 KKQYGGTITSQ------------------------LKKMGSSCDWDRERFTMDEGCSKAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           + +  NL ++G +Y+G
Sbjct: 157 QTVFINLYKKGLIYKG 172


>gi|46447288|ref|YP_008653.1| valyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81626581|sp|Q6MAM1|SYV_PARUW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46400929|emb|CAF24378.1| probable valyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 949

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 60/210 (28%), Gaps = 32/210 (15%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +       +   +  N +       I     N TG +H+GH     V D L       
Sbjct: 13  IDEKWYQFWDAKRYFTANPLSNKPTYCIVIPPPNVTGVLHMGHALVNTVQDILIRWKRML 72

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G+E       + AG     +                               V + L    
Sbjct: 73  GFETLWVPGTDHAGIATQMV-------------------------------VERHLIKTE 101

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             +  ++  E++L  V  +  ++  +II + LK L    D           +   +R + 
Sbjct: 102 GKKRTDYTREEFLKHVWTWKEKSENRII-EQLKRLGNSCDWTRLRFTMDENNSLAVRTMF 160

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             L   G +Y G         TQ    D +
Sbjct: 161 KKLFDDGLIYRGDYLVNWDPHTQTALADDE 190


>gi|72080999|ref|YP_288057.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|90101531|sp|Q4A755|SYV_MYCH7 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71914123|gb|AAZ54034.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 822

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 37/184 (20%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               +           +I     N TG +H+GH   A + D+L       G++V     +
Sbjct: 19  QKKGFFIAPKQTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSV 78

Query: 168 NDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
           + AG   Q+                  + DL +       LK       +++  +  ++ 
Sbjct: 79  DHAGIATQVKV----------------EEDLAKKGIKKSDLKR------EEFIKKCYHWK 116

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E+++L              I++    L I +D         +     + D    L  +  
Sbjct: 117 EKQYLK-------------IKEQWDKLGICYDFSKERFTLDQDAQIAVSDFFIKLWEKNL 163

Query: 286 VYEG 289
           +Y G
Sbjct: 164 IYRG 167


>gi|229094810|ref|ZP_04225815.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229113764|ref|ZP_04243199.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669635|gb|EEL25042.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228688553|gb|EEL42426.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 491

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 95/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFISED--------DFHRGDP--------SPIRDIIDNLARQGYVYEGI 290
            DL    + +  +++E+           RG+             + +     +G +    
Sbjct: 103 LDLLERGLAYKCYMTEEELEAEREGQISRGETPRYAGNHRDLTEEQMKEFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|42560685|ref|NP_975136.1| glutamyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|67461783|sp|Q6MUA6|SYE_MYCMS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|42492181|emb|CAE76778.1| glutamate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321207|gb|ADK69850.1| glutamate--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 483

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 115/350 (32%), Gaps = 69/350 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A++    A    ++G  + R               +Q   L    
Sbjct: 8   APSPTGFLHIGNTRTALMNYLFAK--HYNGSFIVRIEDTDLARNVDGAIESQFENLNWL- 64

Query: 182 FWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQ 239
                  ++ ++S         G Y++    +   + + +L+N  +        ++    
Sbjct: 65  ------GIFPDESIFNVGDQKYGKYMQSQKFDRYKQLAEQLVNQNKAYRCFCSSEELEKD 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +  ++ +     Q  +F+++D   +                   Y      P++K  
Sbjct: 119 YEEQTSKEIIATKYSQKCLFLTQDQISQNLKDKKE------------YSIRFKVPQNKVW 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  + F S  +GD     +LKS+G  TY   + A     Y+    +++   G +
Sbjct: 167 TINDIVRGDVSFDSKDLGDF---VILKSNGVATY---NFAVVIDDYDMQITHVLR--GEE 218

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R   +  A +    +        + L  D    K+SKR+G+ +       + G 
Sbjct: 219 HISNTPRQMMIYDAFNWNYPKFGH-----LTLIVDNTGKKLSKRSGNALFFIEQYKKQGY 273

Query: 420 --------------------------DSVRFMMLWRKNSELLDFDFCKVK 443
                                     + ++     R +     FD  K+K
Sbjct: 274 LSQAIFNYIALLGWSPPGEQEILSQNELIKIFDEKRFSKSPSTFDMVKMK 323


>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 472

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 80/476 (16%), Positives = 146/476 (30%), Gaps = 83/476 (17%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT-REYYINDAGAQI 174
              +G  V +           H+GH R AVV D +   + + GY V     Y  D   +I
Sbjct: 16  KPLEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYRGYRVIFVRNYT-DVDDKI 74

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                           + +  +P       Y+         +   E LN  E  + P V 
Sbjct: 75  IK-------------RSKEEGIPWYEVSKKYIASY------EEDMEALNVKEPTYKPKVT 115

Query: 235 DY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           ++   +  M+  +     A     D++ S + F        R   + LA       G   
Sbjct: 116 EHIREIIEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLA-------GARV 168

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P  K     D     L  +S       + P       +     + +    KY       
Sbjct: 169 EPGEKKKNPLDF---ALWKKSKEGEPGWESPWGVGRPGWH---IECSAMSMKY---LGET 219

Query: 353 IYVMGSDHSGYVKRLE-AVAAAVSEKKAQINV--LLCELVRLYRDGMPIKMSKRAGDFIT 409
           I + G          E  +A + S          +    V + R+    KMSK  G+F T
Sbjct: 220 IDIHGGGFDLIFPHHENEIAQSESYTGKTFARYWIHNGFVMVNRE----KMSKSLGNFFT 275

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           ++ ++ +   D++R  +L       +DF   ++KE  +      ++       S+  +A 
Sbjct: 276 IKEILKQFSPDTLRLFLLSTHYRSPIDFTVERLKEAER-----ALKRLTTFIESV--KAV 328

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           +  P+      P +V     EF+                   A +  +        ++ A
Sbjct: 329 EKLPEEGEKGEPIDVESARREFE-------------------AAMDDD--------FNTA 361

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLVHAVASIINSGLNIIGVESPNE 584
                 +   +    L+      +K+T   R  LV A      + L  +G +    
Sbjct: 362 KALGALYELVKRANTLKDKALKRQKITPSERESLVDAARFT-ENALKTLGFK-LER 415


>gi|158319518|ref|YP_001512025.1| glutamyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166979997|sp|A8MLB5|SYE_ALKOO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|158139717|gb|ABW18029.1| glutamyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 495

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 102/289 (35%), Gaps = 33/289 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R  Y+  A   +        
Sbjct: 8   APSPTGFVHIGSLRTALYNYLFAKKSNGKYILRVEDTDQSR--YVEGAIEGMLRSMAWAG 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
             + + +      L +    G Y++    E+  KY   LL      +        +  + 
Sbjct: 66  VHHDEGVVFTGETLGQKGDFGPYIQSERLEIYKKYMDILLEKG-HAYYCFCSKERLDEVR 124

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +  ++ LN  +D             +  ++ I+     G  Y   L  P++K  Q  
Sbjct: 125 EKQK--VEGLNAGYDGHC---------RNLSKEEIEEKLNAGQPYVIRLRLPENKDIQFH 173

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  ++  +  +    D+ L+KSDG  TY     A     +     ++I   G +   
Sbjct: 174 DIVRGDVVMNTADLD---DQVLMKSDGFPTYHF---AVVVDDHLMEITHVIR--GEEWLP 225

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A   +  Q  V L  ++   R     K+SKR GD     
Sbjct: 226 STPKHVYLYEAFGWEAPQY-VHLPNILNADR----KKLSKRQGDVAVED 269


>gi|19553575|ref|NP_601577.1| valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391219|ref|YP_226621.1| valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|90103533|sp|Q8NN37|SYV_CORGL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41326559|emb|CAF21041.1| PUTATIVE VALINE-TRNA LIGASE [Corynebacterium glutamicum ATCC 13032]
          Length = 903

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 62/212 (29%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D LA  
Sbjct: 25  DPKAVEADLYQGWVDAGYFTADPASDKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARR 84

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   + ++ L   +                    
Sbjct: 85  KRMQGFEVL-------WLPGMDHAGIATQTKVEEMLKETE-------------------- 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    ++  E+++  V ++  Q     I + ++A+    D          G    +
Sbjct: 118 ----GKTRYDYDREEFIAKVWEWK-QEYGGKIGEQMRAIGDSVDWSRERFTLDDGLSRAV 172

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   L   G +Y+       S   +    D
Sbjct: 173 QTIFKKLFDAGLIYQANRLVNWSPVLETAVSD 204


>gi|326937881|gb|AEA13777.1| glutamyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 485

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 97/294 (32%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A  +   G  + R   I D   + N         +Y +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFARHLD--GKFIIR---IEDTDVKRNVAGGEESQLKYLK 64

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  + D  +  G   G Y +    E  D Y    L+  E                  + 
Sbjct: 65  WLGMDWDEGVDVGGEFGPYRQ---TERLDIYKKLYLDLLERGLAYKC----------YMT 111

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +  I   E   + G+      + +     +G +       P ++     D+ 
Sbjct: 112 EEELEAEREGQISRGETPRYAGNHRDLTEEQMKEFEAEGRIPSIRFRVPANRDYTFKDIV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S   GD     ++K DG  TY   + A     +     +++   G DH     
Sbjct: 172 KDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEITHVLR--GDDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A      Q   +      L  +    K+SKR    I       E+G 
Sbjct: 224 KQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQFIEQYKELGY 272


>gi|261365368|ref|ZP_05978251.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566158|gb|EFC87718.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 930

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/331 (18%), Positives = 106/331 (32%), Gaps = 55/331 (16%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 435 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 494

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 495 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 544

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 545 HYSV-----LKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 599

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 600 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 654

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE----- 504
                 +Y R R+            DFD F   V   +  E D   L L   L E     
Sbjct: 655 ------SYRRIRNTLSFLFANLS--DFDPFEHTVPQADMVEIDRYALVLARQLQERLAGD 706

Query: 505 -YP---------RVIENATIAQEPYKLAFYL 525
            YP          ++   +        AFYL
Sbjct: 707 FYPRYAFHFAVKDIVAFCSEDLG----AFYL 733


>gi|222444486|ref|ZP_03607001.1| hypothetical protein METSMIALI_00097 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434051|gb|EEE41216.1| hypothetical protein METSMIALI_00097 [Methanobrevibacter smithii
           DSM 2375]
          Length = 905

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 79/217 (36%), Gaps = 45/217 (20%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ KK   ++++  +V    DG   KMSK  G+ I    V+++ G+D++R         
Sbjct: 525 ALTGKKPFDDIVINGMV-FGEDG--YKMSKSRGNVIAPDEVIEQYGADALRTWAANSVPG 581

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-- 490
             + FD+  +K                      R+  + F  +   +F   V   E +  
Sbjct: 582 SDVIFDWKDIK----------------HGYRFLRKFWNAFRFISMQIFDEEVSYDEIKDN 625

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV--------FHGHWSHGREN 542
           FD  +L ++  L    +V++NA             YD A+         +H       E 
Sbjct: 626 FDPLDLWILSKLNNLNKVVDNAFAN----------YDFATTITSIEKFIWHDFCDEYIEA 675

Query: 543 PRLRFVQAN--NRKLTMMRLQLVHAVASIINSGLNII 577
            + R    +  +      +  L     ++I + L ++
Sbjct: 676 VKYRLYNDDVSDSSRKAAKYTL----RNVIETSLKLL 708


>gi|221194770|ref|ZP_03567827.1| glutamyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185674|gb|EEE18064.1| glutamyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 501

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 60/291 (20%), Positives = 96/291 (32%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R     D   QI   A+   
Sbjct: 12  APSPTGKLHIGGARTAIYNWAFARANGGTFILRIDDTDPARST---DENTQIILRAMRWL 68

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                   +   D       G Y +    E+  K +  LL           K Y      
Sbjct: 69  GLDWDEGPDKGGDF------GPYAQTERLEIYRKAAHSLLAEG--------KAYPCFCTP 114

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +  D KA   +HD F       R  DP+  +  I+     G  Y   +  P  +    
Sbjct: 115 EKLAADKKAAEERHDSFQGYQRTCRNIDPAEAQARIEA----GEPYTIRIKVPLDRGDVI 170

Query: 302 C-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     + F +  + D +   + +SDG+ TY   + A        G  ++I   G DH
Sbjct: 171 VHDAVHGDVTFNARELDDFI---IFRSDGTPTY---NFATVVDDALMGITHIIR--GDDH 222

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   V  A+     +   +    + L  DG   K+SKR G      
Sbjct: 223 LSNTPRQIMVYEALDAPVPEFAHIS---MILGPDGK--KLSKRHGATSVEE 268


>gi|207110358|ref|ZP_03244520.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 81

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
            +  E  L+      P+ +E++       K+  Y   LAS FH  ++ G+     +
Sbjct: 18  LNAEEKYLLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPK 73


>gi|325848878|ref|ZP_08170388.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480522|gb|EGC83584.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 645

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 113/337 (33%), Gaps = 59/337 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+G+   +V+ D L       G++       ++ G +I   ALS      Q   +
Sbjct: 15  PNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAALS-HGSKPQPFVD 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
             +   +     + + +             +   + K    VK+       K  I + + 
Sbjct: 74  KIAAETQDLLKKLDIDY----------DCFIRSTDPKHEENVKNIFQYLYDKGDIYKGEY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                +  + + +E     G+       +D+   + Y ++      K K   K   +  +
Sbjct: 124 DGYYCESCESYFTESQLDEGNCPDCGRAVDHHKEESYFFKLSKYTDKLKELFKDHPEFLE 183

Query: 309 LLFRSTM-VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVM----- 356
             FR    + + +++ L            DL+  +  ++ G D      +++YV      
Sbjct: 184 PKFRQNEMLNNFINKGL-----------EDLSVSRNTFDWGVDVPFDNEHVVYVWIDALS 232

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                   G D   + K   A    + +   + + ++   + +  D              
Sbjct: 233 CYLTAIGYGHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWIL 292

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
               KMSK  G+ +    +V+  G+D++++ +L   N
Sbjct: 293 FDNDKMSKSKGNIMYPEPLVELYGTDALKYFLLREFN 329


>gi|313897678|ref|ZP_07831220.1| valine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957630|gb|EFR39256.1| valine--tRNA ligase [Clostridium sp. HGF2]
          Length = 874

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 75/258 (29%), Gaps = 43/258 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                S +  G     +       + I     N TG +H+GH     + D ++      G
Sbjct: 16  MDHYKSWIDHGYFTAGDKSKDPFCIVI--PPPNVTGKLHLGHAWDTTLQDIVSRYKRMQG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y++            ++   ++   +  + L +           G+    +G+E      
Sbjct: 74  YDML-------WLPGMDHAGIATQAKVDERLKSE----------GISRYDIGRE------ 110

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W         +     IR     + +  D          G    +R +  
Sbjct: 111 ----KFLERAW------EWKEEYASTIRKQWAKMGLSLDYSRERFTLDEGLSDAVRRVFV 160

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +L   G +Y+G       +     D   K  L    ++  +++  +            +L
Sbjct: 161 DLYNDGLIYQG-------ERIINWDPQAKTALSNIEVIHKEIEGAMYYFKYKVVETGKEL 213

Query: 339 AYFKCKYERGF-DNMIYV 355
                + E  F D  I+V
Sbjct: 214 VIATTRPETMFADQAIFV 231



 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 100/308 (32%), Gaps = 61/308 (19%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
              G +Y G +  P+       D D     F S +          ++D    YF  D+  
Sbjct: 421 KETGEIYVG-MEDPQDLENWIQDEDVLDTWFSSALWPFSTLGWPKETDDLNRYFPNDV-- 477

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  G+D +I+   +  +    +          K    +VL+  LV   RD    KM
Sbjct: 478 ----LVTGYD-IIFFWVARMA---FQTRYCMKNRPFK----DVLIHGLV---RDAQGRKM 522

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ I    V+ + G D++RF +           D   + E+ + +  F  +   A 
Sbjct: 523 SKSLGNGIDPMDVIADHGVDALRFFLTTNSTPGQ---DLRYIDEKVEASANFINKIWNAS 579

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R +  Q  +     D DL   ++I +              L  +  V+EN T   E   
Sbjct: 580 -RFVLMQIPEDMEVSDIDLSNASMIDKWI------------LKRFNEVLENVTANME--- 623

Query: 521 LAFYLYDLAS---------VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
              Y Y L            F   +           + +++  L         A  S + 
Sbjct: 624 --KYEYALVGNELYSFIWDDFCSWY----IELSKAGLSSDDETLR-------RATQSTLV 670

Query: 572 SGLNIIGV 579
           + L+  G+
Sbjct: 671 TVLS--GI 676


>gi|240949772|ref|ZP_04754104.1| valyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295804|gb|EER46491.1| valyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 954

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPNENPNVPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|167855206|ref|ZP_02477976.1| valyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853659|gb|EDS24903.1| valyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 954

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPNENPNVPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|54020305|ref|YP_116201.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823494|sp|Q5ZZL4|SYV_MYCH2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53987478|gb|AAV27679.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 822

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 37/184 (20%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               +           +I     N TG +H+GH   A + D+L       G++V     +
Sbjct: 19  QKKGFFIAPKQTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSV 78

Query: 168 NDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
           + AG   Q+                  + DL +       LK       +++  +  ++ 
Sbjct: 79  DHAGIATQVKV----------------EEDLAKKGIKKSDLKR------EEFIKKCYHWK 116

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E+++L              I++    L I +D         +     + D    L  +  
Sbjct: 117 EKQYLK-------------IKEQWDKLGICYDFSKERFTLDQDAQIAVSDFFIKLWEKNL 163

Query: 286 VYEG 289
           +Y G
Sbjct: 164 IYRG 167


>gi|312601628|gb|ADQ90883.1| Valyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 822

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 37/184 (20%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
               +           +I     N TG +H+GH   A + D+L       G++V     +
Sbjct: 19  QKKGFFIAPKQTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSV 78

Query: 168 NDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
           + AG   Q+                  + DL +       LK       +++  +  ++ 
Sbjct: 79  DHAGIATQVKV----------------EEDLAKKGIKKSDLKR------EEFIKKCYHWK 116

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E+++L              I++    L I +D         +     + D    L  +  
Sbjct: 117 EKQYLK-------------IKEQWDKLGICYDFSKERFTLDQDAQIAVSDFFIKLWEKNL 163

Query: 286 VYEG 289
           +Y G
Sbjct: 164 IYRG 167


>gi|223041858|ref|ZP_03612046.1| valyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017351|gb|EEF15774.1| valyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 954

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPNENPNVPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|148825930|ref|YP_001290683.1| valyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|172047919|sp|A5UBZ9|SYV_HAEIE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|148716090|gb|ABQ98300.1| valyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 954

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSGNENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIGAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|302333330|gb|ADL23523.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 876

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        V    +  +         I     N TG +H+GH     + D +  +
Sbjct: 8   DPREVEAGRYEKWVKNGYFKPSEDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L  N+  +               + 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGITRYDLGREKFLEQAWDW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y+S                         IR     L +  D          G    +
Sbjct: 119 KEEYAS------------------------FIRAQWAKLGLGLDYSRERFTLDEGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +  +L  +G +Y G          +    D
Sbjct: 155 KKVFVDLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.6 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADL 338
              G +Y G   P   +  Q+ D D     F S +          L   D    Y    L
Sbjct: 419 KETGEIYVGEEAPTDIENWQQ-DEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNAL 477

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                    G+D +I+         V R+       ++++   +VLL  LVR   DG   
Sbjct: 478 VT-------GYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR-- 519

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           KMSK  G+ +    V+DE G+DS+R+ +    +   
Sbjct: 520 KMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|309973077|gb|ADO96278.1| Valyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 954

 Score = 52.2 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSGNENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 70  RFNRMEGHNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIGAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWERERFTMDDGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|326804011|ref|YP_004321829.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650118|gb|AEA00301.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 666

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 112/343 (32%), Gaps = 64/343 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  DT+A      G+EV                   +    +  L  
Sbjct: 17  PSGQLHIGNSYSTIAADTIARYKRLMGHEVF-----------------FLTGADEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 EG  P  Y+  + + +   + S  L+   +K++    DY V+A+  I    L  
Sbjct: 60  QQKAEEEGISPKAYVDRMAEGMQKLWKS--LDISNDKFIRTTDDYHVKAVQDIFEQLLDQ 117

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDII---DNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +I   +++ + S  D      + + ++    D     G    G       + +    M 
Sbjct: 118 GDIYLGEYEGWYSVSDEEYFTETQLAEVYRDDDGKVIGGKAPSGHEVELVKEESYFFKMS 177

Query: 306 RKQLLFRS--TMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERGF------DNMIY 354
           +             D +     K +    +      DLA  +  +  G        ++IY
Sbjct: 178 KYADRLLQYYEDHPDFIQPESRKKEMINNFIKPGLEDLAVTRTSFSWGIPVRSNPKHVIY 237

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                 D S Y K   A    V ++  + + +   ++ +  D      
Sbjct: 238 VWIDALANYITALGYGSEDDSRYQKFWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQ 297

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ +    ++D  G D++R+ ++  
Sbjct: 298 VFGHGWLLMQDGKMSKSKGNVVYPEMLIDRYGLDALRYYLMRE 340


>gi|308273079|emb|CBX29683.1| Valyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 896

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 57/195 (29%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K           +    +      +I     N TG +H+GH     + D L    
Sbjct: 20  PKEVEKHWYEYWEKEELFAACELSDKKSYSIVIPPPNVTGVLHMGHALNITMQDILCR-- 77

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               Y   R     D                   L+   +D        V  K +  E  
Sbjct: 78  ----YRRLR----GD-----------------NVLWMPGTDHAGIATQNVVEKKLASENT 112

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++         EK++  V ++  Q    II   LK L    D  +       G    +R
Sbjct: 113 DRH-----KLGREKFIEAVWEWRNQYGSAIINQ-LKRLGASCDWKLERFTMDEGLSVAVR 166

Query: 275 DIIDNLARQGYVYEG 289
            +   L ++  +Y G
Sbjct: 167 KVFVQLYKEDLIYRG 181


>gi|309799135|ref|ZP_07693386.1| glutamyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117224|gb|EFO54649.1| glutamyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 486

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 103/295 (34%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  + Y     L     EL  +Y  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETNKNYRQSERL-----ELYQRYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
           +  + + R+  +A   +   +I+E   + G     +   +      G +    L   +S 
Sbjct: 109 EEELAVERERQEAAG-ETPCYINE---YLGMSEEEKAAYVAEREAAGIIPTVRLAVNESG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G
Sbjct: 165 IYKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|298369470|ref|ZP_06980787.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282027|gb|EFI23515.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 930

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 106/331 (32%), Gaps = 55/331 (16%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 435 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 494

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  I   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 495 LLEKIALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 544

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 545 HYSV-----LKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 599

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 600 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 654

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE----- 504
                 +Y R R+            DFD F   V   +  E D   L L   L E     
Sbjct: 655 ------SYRRIRNTLSFLFANLS--DFDPFEHTVPQADMVEIDRYALVLARQLQERLAGD 706

Query: 505 -YP---------RVIENATIAQEPYKLAFYL 525
            YP          ++   +        AFYL
Sbjct: 707 FYPRYAFHFAVKDIVAFCSEDLG----AFYL 733


>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 913

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|119946877|ref|YP_944557.1| isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166229761|sp|A1SZP3|SYI_PSYIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119865481|gb|ABM04958.1| Isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 944

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 107/325 (32%), Gaps = 41/325 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  +     +  L      KW+P      ++ M++      I R     + I   +   
Sbjct: 424 FIAMDQKSLRADALAEIQAVKWIPSWGQQRIEKMVENRPDWCISRQRTWGVPITLFVHKE 483

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD----MDRKQLLFRSTMVG 317
            D+ H      +  I   +   G      L P      +  +     D   + F S   G
Sbjct: 484 TDELHPNSVEMMELIARKIEIDGIQAWWDLEPETLLGFEAEEYRKVTDTLDVWFDS---G 540

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSE 376
                 + K +  YT  + + A              Y+ GSD   G+ +     + A++ 
Sbjct: 541 TTHASVVAKRE-EYTLESGEQAAADM----------YLEGSDQHRGWFQSSLMTSMAINN 589

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    DG   KMSK  G+ ++ + V++ +G+D +R  +     +  + 
Sbjct: 590 KAPYKEVLTHGFVV---DGNGKKMSKSLGNVMSPQTVMNNLGADILRLWVASTDYTGEMT 646

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++  +S +        +Y R R+  R         D      +++P E        
Sbjct: 647 VS-DEILNRSAD--------SYRRIRNTSRFLLANLNGFD---PTTDLVPNEEMVALDRW 694

Query: 497 QLIVHLAEYPRVIENATIAQEPYKL 521
            +   L     VIE A  +   + +
Sbjct: 695 IVAQTLILQNDVIE-AYESYSLHAV 718


>gi|308389936|gb|ADO32256.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis
           alpha710]
          Length = 929

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|145296343|ref|YP_001139164.1| valyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140846263|dbj|BAF55262.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 903

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 60/212 (28%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D LA  
Sbjct: 25  DPKAVEADLYQGWVDAGYFTADPASDKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARR 84

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   + ++ L   +      Y    ++  V  E 
Sbjct: 85  KRMQGFEVL-------WLPGMDHAGIATQTKVEEMLKETEGKTRYDYDREEFIAKV-WEW 136

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                           I + ++A+    D          G    +
Sbjct: 137 KQEYG------------------------GKIGEQMRAIGDSVDWSRERFTLDDGLSRAV 172

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   L   G++Y+       S   +    D
Sbjct: 173 QTIFKKLFDAGFIYQANRLVNWSPVLETAVSD 204


>gi|33303709|gb|AAP22262.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 416

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 108/344 (31%), Gaps = 76/344 (22%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V GD +A      GY V      ++ G +I   A  +               
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL--------------- 45

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +   +I  
Sbjct: 46  --NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQGDIYL 101

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +                ++D +     V   +             +  +   FR   +
Sbjct: 102 DEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFFR---M 155

Query: 317 GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------FDNMI 353
           G  VDR L   + +  +                    DLA  +  ++ G        ++I
Sbjct: 156 GKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVI 215

Query: 354 YVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV                ++   Y K   A    V ++  + + +   ++ +  D     
Sbjct: 216 YVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPK 275

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                        KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 276 KVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 319


>gi|325684336|gb|EGD26505.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 879

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPQEVEAGRYQEWLDEDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L             GV    +G+  
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARLRE----------QGVSRYDLGR-- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                II+   + L +  D         +G    +
Sbjct: 110 -KKFVEKVWEWKDE-------------YANIIKSQWQKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RRVFVQLYNEGLIYRGEYIINWDPKLRTALSD 187



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +            E+     VL      L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFT---------GERPFDNVVLHG----LIRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ I    V+D+ G+D++R+ +L      +   F + K+
Sbjct: 526 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKM 565


>gi|76786857|ref|YP_329179.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|90108440|sp|Q3K2S4|SYV_STRA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76561914|gb|ABA44498.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 884

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L                        
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEERL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++        I+     + +  D          G    +
Sbjct: 99  -REQGISRYDLGREKFLDKVWEWK-DEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTT-------QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R +  +L  +G++Y G                 +    D +   +    + +D  R L  
Sbjct: 157 RKVFVDLYNRGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEV 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 217 ATTRPETMFGDVAVAVNPEDPRYKDLI 243


>gi|322515965|ref|ZP_08068906.1| glutamate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322125639|gb|EFX96969.1| glutamate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 484

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q++ L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y K++ + LA+  + +     EE      +
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELATERER 118

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G +    L   
Sbjct: 119 QEAAGETPRYINEFLGMTEEEKAAYIAERE-----------------AAGIIPTVRLAVN 161

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 162 ESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR 216

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 217 --GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|312862358|ref|ZP_07722601.1| glutamate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311102001|gb|EFQ60201.1| glutamate--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 484

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q++ L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y K++ + LA+  + +     EE      +
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELATERER 118

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G +    L   
Sbjct: 119 QEAAGETPRYINEFLGMTEEEKAAYIAERE-----------------AAGIIPTVRLAVN 161

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 162 ESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR 216

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 217 --GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|290892267|ref|ZP_06555262.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290558093|gb|EFD91612.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 664

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|240138912|ref|YP_002963387.1| isoleucine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008884|gb|ACS40110.1| isoleucine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 991

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 23/209 (11%)

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDG 395
           LA  +   + G D ++Y+ GSD   G+ +    +  +   +  A  +V+L     L  D 
Sbjct: 600 LAGIRRAVDGGPDTVMYLEGSDQHRGWFQSS--LLESCGTRGHAPYDVVLTHGFVL--DA 655

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  ++V+ E G+D +R  +     S+ L      VK  ++        
Sbjct: 656 KGEKMSKSRGNVVAPQNVIKESGADILRLWVAAADYSDDLRIGPEIVKTFAE-------- 707

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
             Y + R+  R              P + +P  +E    E  ++  LA+    I +A  A
Sbjct: 708 -TYRKLRNSLRWMLGSLAHR----VPGDDVP-FTEMPELERFILHRLAQLDGEIRDAYAA 761

Query: 516 QEPYKLAFYLYD--LASVFHGHWSHGREN 542
            +  ++   L +  +       +   R++
Sbjct: 762 FDTKRIVA-LLNGFMTGDLSAFYFDVRKD 789


>gi|229074149|ref|ZP_04207195.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229100886|ref|ZP_04231691.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228682540|gb|EEL36612.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228708919|gb|EEL61046.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 491

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 95/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFISED--------DFHRGDP--------SPIRDIIDNLARQGYVYEGI 290
            DL    + +  +++E+           RG+             + +     +G +    
Sbjct: 103 LDLLERGLAYKCYMTEEELEAEREGQISRGETPRYAGNHRDLTEEQMKEFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|118586620|ref|ZP_01544060.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|118432935|gb|EAV39661.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 918

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 69/212 (32%), Gaps = 34/212 (16%)

Query: 95  PSYLRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             + ++ L +  V    +  +   G+    +I     N TG +H+GH     + D L   
Sbjct: 37  DHWQQEELFNPDVDKKLKPAKYADGQPEAYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 96

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L  +          G+    +G+E 
Sbjct: 97  KRMQGYDTL-------WLPGMDHAGIATQAKVEARLRED----------GISRYDLGRE- 138

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                II++    + +  D         +G    +
Sbjct: 139 --KFVDKVWQWKDE-------------YASIIKEQWAKMGLSLDFSRERFTLDKGLNEAV 183

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L ++G +Y G          +    D
Sbjct: 184 RKVFVDLYKKGLIYRGEYIINWDPQARTALSD 215



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 83/229 (36%), Gaps = 34/229 (14%)

Query: 226 EEKWLPIVKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDNLA 281
            E+ L + K  + +     IR  D  +        ++       G   P+  RD  +   
Sbjct: 402 AEQALKMQKQQNDKVDFWPIRFEDTYQTWMNNIHDWVISRQLWWGHRIPAWYRDTKEGEK 461

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
                Y G+  P     TQ  D+        L   ST+   D +     SD    Y  + 
Sbjct: 462 E---TYVGLTAPKGDGWTQDPDVLDTWFSSALWPFSTLGWPDTNN----SDYKRFYPTST 514

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +         G+D +I+         + R+   A   +  +   NVL+  L+   RD   
Sbjct: 515 MVT-------GYD-IIFFW-------ISRMIFQAKEFTGTRPFKNVLIHGLI---RDSKG 556

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
            KMSK  G+ I    V+++ G+D++R+ +       + L+F   K+   
Sbjct: 557 RKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDLNFSNDKMDSA 605


>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 921

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|310829086|ref|YP_003961443.1| hypothetical protein ELI_3521 [Eubacterium limosum KIST612]
 gi|308740820|gb|ADO38480.1| hypothetical protein ELI_3521 [Eubacterium limosum KIST612]
          Length = 494

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 126 EFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +  + +PTG +HVG  R A+          G  L  L      +  R  Y  + GA  N 
Sbjct: 4   DRFAPSPTGNVHVGSLRTALYNYLFAKKNNGQFLLRL-----EDTDRTRY--EEGAVENL 56

Query: 177 LALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           L   +       + L+  D  + +    G Y++    E+  KY  +LL    + +     
Sbjct: 57  LGALMVTGVVPDEGLFEEDGKIVQKGDYGPYIQSERLEIYKKYIDQLLENG-QAYYCFCT 115

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPP 293
              +  + +  +               E   + G   +  R+ ++     G  Y   L  
Sbjct: 116 KERLDEVREKQKR------------AGETPRYDGHCRNLPREEVEARVAAGEPYVIRLKL 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+       D  R ++   +  +    D+ L+K+DG  TY     A     +  G  ++I
Sbjct: 164 PEDHVVTFDDAVRGRIEINTNDLD---DQVLIKTDGFPTYHF---AVVVDDHLMGITHVI 217

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              G +      +   +   +  ++ Q   L   L     +    K+SKR GD 
Sbjct: 218 R--GEEWLPSTPKHVYLYECLGWEQPQYVHLSNIL-----NDDHKKLSKRQGDV 264


>gi|256751721|ref|ZP_05492595.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749390|gb|EEU62420.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 932

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 103/305 (33%), Gaps = 30/305 (9%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPI 273
              L    E  W P   +  +  M++  RD      +   +   IF  E     G P   
Sbjct: 426 EEALKAIKEVNWYPSWGEERITNMVRDRRDWCISRQRVWGVPIPIFYCEK---CGKPLIN 482

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D I+ +       +         + ++           ST    + D   +  D   ++
Sbjct: 483 DDTINAVKE--IFRQKGSDAWFEMSAEEILPKGITCECGSTKFRKETDIMDVWFDSGSSH 540

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
            AA L       +   +  +Y+ GSD   G+ +     + A   K    NVL    V   
Sbjct: 541 -AAVLQTHPD-LKWPAE--LYLEGSDQHRGWFQSSLLTSVATRGKAPYRNVLTHGFVV-- 594

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ I    V+ E G+D +R   +    +  +      +K+ ++     
Sbjct: 595 -DGEGRKMSKSLGNGIDPADVIKEYGADILRLWTVSADFTSDMRISQEILKQMTE----- 648

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY + R+  +       D D D   ++++P E   +  +  L   L    + +  A
Sbjct: 649 ----AYRKIRNTSKFLLSNLYDFDPD---KDMLPYEELLEIDKWAL-YRLNRVVKELTEA 700

Query: 513 TIAQE 517
               E
Sbjct: 701 FDKYE 705


>gi|21325147|dbj|BAB99769.1| Valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 900

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 59/212 (27%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D LA  
Sbjct: 22  DPKAVEADLYQGWVDAGYFTADPASDKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARR 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   + ++ L   +      Y    ++  V  E 
Sbjct: 82  KRMQGFEVL-------WLPGMDHAGIATQTKVEEMLKETEGKTRYDYDREEFIAKV-WEW 133

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                           I + ++A+    D          G    +
Sbjct: 134 KQEYG------------------------GKIGEQMRAIGDSVDWSRERFTLDDGLSRAV 169

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   L   G +Y+       S   +    D
Sbjct: 170 QTIFKKLFDAGLIYQANRLVNWSPVLETAVSD 201


>gi|331002328|ref|ZP_08325846.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330410144|gb|EGG89578.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 60/198 (30%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  +   +    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYSPEKIEGRIYKKWLEEKYFQAKVNKDKKPFTIIMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GY                           +AL+   +D          ++ +  
Sbjct: 67  RYKRMAGY---------------------------EALWQPGTDHAAIATEVKVIEKLKA 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DK+      F +E W     D+      +II   L+ L    D              
Sbjct: 100 EGKDKHELGREGFLKEAW-----DWKNDYGTRIINQ-LQRLGSSADWDRERFTMDEHGQK 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++++   L  +GY+Y+G
Sbjct: 154 AVKEVFVRLYEKGYIYKG 171


>gi|320529744|ref|ZP_08030822.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137983|gb|EFW29887.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 514

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 104/331 (31%), Gaps = 51/331 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +GY+V                      +  Q    
Sbjct: 16  PSAKLHIGHAYCTTVADTIARFKRLAGYDV------------FFLTGSDEHGQKIQQAAE 63

Query: 192 NDSDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDD 248
            +   P+ Y   +        +L      + +   EE+   +V++   Q      I + +
Sbjct: 64  KEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIYKGE 123

Query: 249 LKALNIQHDIFI----------------------SEDDFHRGDPSPIRDIIDNLARQGYV 286
            K L                              SE+ +          ++  +      
Sbjct: 124 YKGLYCTPCESYWTELQLDENGNCPDCHRPVQEVSEEAYFFRMSKYADRVLAYIKEHPDF 183

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYF 341
            + +    +  +  +  ++   +   S   G     D      +  D    Y    + Y 
Sbjct: 184 IQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLTP-IGYM 242

Query: 342 KCK--YERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             K  + + +   ++++G +    +      +  A+     +    +     L  DG   
Sbjct: 243 HDKETFRKYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPK---KVYGHGWLIVDGA-- 297

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ +    +++E G+D++R+ +L  
Sbjct: 298 KMSKSVGNVVDPIALIEEFGADAIRYFLLRE 328


>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 921

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 117/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ I  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIIVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFC 710


>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 913

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781689|sp|C0QRE6|SYC_PERMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 487

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 108/316 (34%), Gaps = 44/316 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R  +V D +   + + GY V   Y++         +   +  R +         L
Sbjct: 38  HVGHGRSLIVFDVIRRYLRYLGYNV---YFV----RNFTDVDDKIINRAKNEC------L 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALNI 254
           P       Y+K    + A+ +  E  +        +P + D+  + + K       A  +
Sbjct: 85  PFTVIADRYIKEY-FQDAENFRIEPADVEPRVTTHIPDIIDFIQRLIDKGY-----AYEV 138

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           + D++ S   F        +  +D L        G    P  K     D     L   S 
Sbjct: 139 EGDVYFSVRKFKEYG-KLSKRSVDELIA------GARVEPGEKKRDPLDF---ALWKASK 188

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVA 371
                 D P  K  G   +     A       +     I + G          E   A A
Sbjct: 189 AGEPAWDSPWGK--GRPGWHTECCAMIF----KHLGETIDIHGGGLDLTFPHHENELAQA 242

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            A+S+K      +   LV +       KMSK  G++ITL+ +  +   D +R ++L    
Sbjct: 243 EALSDKPFARYWIHNGLVTV----NGQKMSKSLGNYITLKEIYSKYDPDVLRLLVLSVHY 298

Query: 432 SELLDFDFCKVKEQSK 447
              LDF + K++E  K
Sbjct: 299 RSPLDFSWEKMEETKK 314


>gi|217965737|ref|YP_002351415.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217335007|gb|ACK40801.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569716|emb|CAR82895.1| metS [Listeria monocytogenes L99]
          Length = 665

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|212696056|ref|ZP_03304184.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676965|gb|EEB36572.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 645

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 113/337 (33%), Gaps = 59/337 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+G+   +V+ D L       G++       ++ G +I   ALS      Q   +
Sbjct: 15  PNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAALS-HGSKPQPFVD 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
             +   +     + + +             +   + K    VK+       K  I + + 
Sbjct: 74  KIAAETQDLLKKLDIDY----------DCFIRSTDPKHEENVKNIFQYLYDKGDIYKGEY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                +  + + +E     G+       +D+   + Y ++      K K   K   +  +
Sbjct: 124 DGYYCESCESYFTESQLDEGNCPDCGRAVDHHKEESYFFKLSKYTDKLKELFKDHPEFLE 183

Query: 309 LLFRSTM-VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVM----- 356
             FR    + + +++ L            DL+  +  ++ G D      +++YV      
Sbjct: 184 PKFRQNEMLNNFINKGL-----------EDLSVSRNTFDWGVDVPFDNEHVVYVWIDALS 232

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                   G D   + K   A    + +   + + ++   + +  D              
Sbjct: 233 CYLTAIGYGHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWIL 292

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
               KMSK  G+ +    +V+  G+D++++ +L   N
Sbjct: 293 FDNDKMSKSKGNIMYPEPLVELYGTDALKYFLLREFN 329


>gi|163851748|ref|YP_001639791.1| isoleucyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163663353|gb|ABY30720.1| isoleucyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 991

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 23/209 (11%)

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDG 395
           LA  +   + G D ++Y+ GSD   G+ +    +  +   +  A  +V+L     L  D 
Sbjct: 600 LAGIRRAVDGGPDTVMYLEGSDQHRGWFQSS--LLESCGTRGHAPYDVVLTHGFVL--DA 655

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  ++V+ E G+D +R  +     S+ L      VK  ++        
Sbjct: 656 KGEKMSKSRGNVVAPQNVIKESGADILRLWVAAADYSDDLRIGPEIVKTFAE-------- 707

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
             Y + R+  R              P + +P  +E    E  ++  LA+    I +A  A
Sbjct: 708 -TYRKLRNSLRWMLGSLAHR----VPGDDVP-FTEMPELERFILHRLAQLDGEIRDAYAA 761

Query: 516 QEPYKLAFYLYD--LASVFHGHWSHGREN 542
            +  ++   L +  +       +   R++
Sbjct: 762 FDTKRIVA-LLNGFMTGDLSAFYFDVRKD 789


>gi|309804663|ref|ZP_07698728.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308166055|gb|EFO68273.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 499

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D     G   G Y +   K++ +KY  +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y+    ++  R++ +A+ I         ++       I+        +G      +
Sbjct: 106 AYYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A +    +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|291614548|ref|YP_003524705.1| isoleucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584660|gb|ADE12318.1| isoleucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 962

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 75/220 (34%), Gaps = 20/220 (9%)

Query: 292 PPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKY 345
           P    K  +  +    +  F    + ++GDD       SD    +F   A   A  + + 
Sbjct: 527 PELLEKVAKLVEQSGIEAWFSLNSADLLGDDAAHYRKLSDTLDVWFDSGATHFAVLRNRP 586

Query: 346 ERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           E  +   +Y+ GSD   G+ +       A+  +     +L         D    KMSK  
Sbjct: 587 ELAYPADLYLEGSDQHRGWFQSSLLTGCAIDGRAPYRQLLTHGF---TVDEKGYKMSKSK 643

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I  + + +++G+D +R  +     S  +      +K  +           Y R R+ 
Sbjct: 644 GNGIEPQDICNKLGADILRLWIASTDYSGEMSLSEEILKRVTDG---------YRRIRNT 694

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            R       D D       V  Q  E D   L L   L +
Sbjct: 695 LRFLLANIADFDMARDAMPV-EQWLEIDRYALALTQQLQD 733


>gi|227528869|ref|ZP_03958918.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227351192|gb|EEJ41483.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 675

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 122/411 (29%), Gaps = 54/411 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    V  D  A      GY+V      ++ G +I         +  + L  
Sbjct: 17  PSGKLHIGNTYTTVACDAEARYKRLMGYDVFYLTGTDEHGLKIE--------QKAEKLGK 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELA-DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
              +  +    G+       E+  DK+     ++ E+    I + +  Q    I +   K
Sbjct: 69  QPQEYVDEMAAGIKKLWKTMEITNDKFIRTTDDYHEKAVQKIFQKFVDQG--DIYKGKYK 126

Query: 251 ALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
               +  + + +E            ++I   A  G+  + +          K        
Sbjct: 127 GWYSVDDEEYFTESQLAEVYRDDNGNVIGGKAPSGHEVQLVEEESYFFKMSKYSDWLMNY 186

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDNMIYVM------- 356
                   +   R     +        DLA  +  +  G        +++YV        
Sbjct: 187 YKEHPDFIEPHTRVNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSNY 246

Query: 357 ------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------------G 395
                 GSD     K+   A    V ++  + + +   ++                    
Sbjct: 247 ITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGWLTM 306

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYV 454
              KMSK  G+ I    +V+  G D+ R+ +L          F      ++   +     
Sbjct: 307 KDGKMSKSKGNVIYPETLVNRYGLDATRYYLLKAMPFGNDGVFSPEDFVDKVNYD----- 361

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
             A      + R    I    D  L  +N    E + D  +      +AE+
Sbjct: 362 -LANDLGNLLNRTVAMINKYQDGKLVAQNDATTEYDTDLEQTA-ANAIAEF 410


>gi|218530554|ref|YP_002421370.1| isoleucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522857|gb|ACK83442.1| isoleucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 991

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 23/209 (11%)

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDG 395
           LA  +   + G D ++Y+ GSD   G+ +    +  +   +  A  +V+L     L  D 
Sbjct: 600 LAGIRRAVDGGPDTVMYLEGSDQHRGWFQSS--LLESCGTRGHAPYDVVLTHGFVL--DA 655

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  ++V+ E G+D +R  +     S+ L      VK  ++        
Sbjct: 656 KGEKMSKSRGNVVAPQNVIKESGADILRLWVAAADYSDDLRIGPEIVKTFAE-------- 707

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
             Y + R+  R              P + +P  +E    E  ++  LA+    I +A  A
Sbjct: 708 -TYRKLRNSLRWMLGSLAHR----VPGDDVP-FTEMPELERFILHRLAQLDGEIRDAYAA 761

Query: 516 QEPYKLAFYLYD--LASVFHGHWSHGREN 542
            +  ++   L +  +       +   R++
Sbjct: 762 FDTKRIVA-LLNGFMTGDLSAFYFDVRKD 789


>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782366|sp|B7HLM9|SYI_BACC7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782367|sp|B9IVX2|SYI_BACCQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 921

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|239636925|ref|ZP_04677923.1| glutamyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597473|gb|EEQ79972.1| glutamyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 484

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 98/301 (32%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYGGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W   +   + D D   G Y       +   L  +   E   +   K     ++   +
Sbjct: 64  --KWLGLEWDESVDKDKGYGPYRQSERADIYNPLIKQLLDEDKAY---KCYMTEEELEAE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +I R ++     QH     E                    +G         PK KT 
Sbjct: 119 REAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPKDKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G 
Sbjct: 166 TFNDMVKGEISFDSNNMGDW---VIVKKDGVPTYN------FAVAIDDHYMEISDVIRGD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEAPRFAHM-----SLIVNEERKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 921

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 67/347 (19%), Positives = 117/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFC 710


>gi|226952305|ref|ZP_03822769.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836971|gb|EEH69354.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 945

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 100/291 (34%), Gaps = 39/291 (13%)

Query: 292 PPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRP--------LLKSDGSYTYFAADLAY 340
           P    +  Q  + +     +    S  +G D ++         +    G+  Y     A 
Sbjct: 503 PELIEEVAQLIEQEGIDAWYNRDASDFIGADAEQYNAVRDTLDVWFDSGTTHY-----AV 557

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + + E      +Y+ GSD   G+ +     + A++E+     +L    V    D    K
Sbjct: 558 LREREELQDPADLYLEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVV---DEKGRK 614

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ IT + ++ ++G+D +RF +         +    K       +        Y 
Sbjct: 615 MSKSLGNIITPQDIIKDMGADGLRFWIAS--ADYRYEMTAGKEIFSRASD-------GYR 665

Query: 460 RCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           R R+  R   A         D  P + +    ++      ++   AE  + I+ A     
Sbjct: 666 RIRNTLRFLLANLNGFKPSSDALPVDELIALDQY------ILQRAAEVQKTIQQAYEEMN 719

Query: 518 PYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            + +   L +   +     +    ++ +    +A+++     +  L H V 
Sbjct: 720 FHIVTNALTNFCINDLGSFYLDIIKDRQYTT-KADSQARRSAQTALYHLVQ 769


>gi|218708570|ref|YP_002416191.1| isoleucyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782454|sp|B7VJ87|SYI_VIBSL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218321589|emb|CAV17541.1| Isoleucyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 952

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 43/309 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H   P+ I  +   + 
Sbjct: 450 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETSELHPDSPALIEKVAKLVE 509

Query: 282 RQGYVYEGILPPPKSKTTQKCD-----MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            +G      +   +    +  D     +D   + F S +    V       D    Y   
Sbjct: 510 EKGIQAWWDVDAAELMGAEDADKYEKVLDTLDVWFDSGVTHFSV------VDSREEYNFP 563

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +        ER     +Y+ GSD   G+ +     + A+ ++     VL    V    DG
Sbjct: 564 N-------EERTHSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DG 613

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +       
Sbjct: 614 NGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTNEVAVS-DEILKRSAD------- 665

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATI 514
            AY R R+  R       +L+      +++P E         +     A+    I  A  
Sbjct: 666 -AYRRIRNTAR---FFLANLNGFNPETDLVPAEEMVALDRWAVGRAQAAQ--EEIVKAYG 719

Query: 515 AQEPYKLAF 523
               + +  
Sbjct: 720 EYNTHGVTQ 728


>gi|110803560|ref|YP_699780.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684061|gb|ABG87431.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 645

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 117/348 (33%), Gaps = 78/348 (22%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    +H+G+    V  D +A     +G+EV      ++ G +I  +A        
Sbjct: 14  YPSTN----LHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE------ 63

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +
Sbjct: 64  -----------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFK 110

Query: 247 DDLKALNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 +I  D +             E     G+       ++    + Y ++      +
Sbjct: 111 KLYDQGDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADR 170

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD- 350
                +   D  Q   R   + ++  RP             DL   +  +  G    FD 
Sbjct: 171 LIQYIEEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDE 220

Query: 351 -NMIYVM-------------GSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++IYV              G +    Y K   A    + +   + + +   ++ +    
Sbjct: 221 KHVIYVWIDALSNYITALGYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGL 280

Query: 396 M--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                            KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 281 ELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|86148416|ref|ZP_01066707.1| isoleucyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85833770|gb|EAQ51937.1| isoleucyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 930

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 43/309 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H   P+ I  +   + 
Sbjct: 428 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETSELHPDSPTLIEKVAKLVE 487

Query: 282 RQGYVYEGILPPPKSKTTQKCD-----MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            +G      +   +    +  D     +D   + F S +    V       D    Y   
Sbjct: 488 EKGIQAWWDVDAAELMGAEDADKYEKVLDTLDVWFDSGVTHFSV------VDSREEYNFP 541

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +        ER     +Y+ GSD   G+ +     + A+ ++     VL    V    DG
Sbjct: 542 N-------EERTHSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DG 591

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +       
Sbjct: 592 NGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTNEVAVS-DEILKRSAD------- 643

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATI 514
            AY R R+  R       +L+      +++P E         +     A+    I  A  
Sbjct: 644 -AYRRIRNTAR---FFLANLNGFNPETDLVPAEEMVALDRWAVGRAQAAQ--EEIVKAYG 697

Query: 515 AQEPYKLAF 523
               + +  
Sbjct: 698 EYNTHGVTQ 706


>gi|319899110|ref|YP_004159203.1| Valyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403074|emb|CBI76629.1| Valyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 907

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 68/215 (31%), Gaps = 46/215 (21%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH   A + D +       G  V  +  ++ AG     +            
Sbjct: 45  PNVTGSLHMGHALNATIQDIMVRFQRMRGKNVLWQPGMDHAGIATQMV------------ 92

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V ++LA++          EK++  V  +  +A   II + L
Sbjct: 93  -------------------VERQLAERQEPARQEMGREKFIERVWKWRNEAG-GIITNQL 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG---------ILPPPKSKTTQ 300
           K L +  D          G    + ++   L +QG +Y+          +L        +
Sbjct: 133 KRLGVSCDWSRERFTMDEGLSQAVLEVFVTLYKQGLIYKDKRLVNWDPRLLTAISDLEVE 192

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
             ++      FR  + G   D      D S T+  
Sbjct: 193 LKEIKGYLWHFRYPLEGKIFD-----PDDSTTFIT 222


>gi|313885106|ref|ZP_07818858.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619797|gb|EFR31234.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 877

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 33/235 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   +    +I     N TG +H+GH     + D L   
Sbjct: 10  NPQEVEAGRYEEWLDKGVFAPSEDTEAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMLIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 70  KRMLGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    ++  +   + IR     + +  D          G    +
Sbjct: 99  -KEEGLSRYDLGREKFLEKTWEWK-EEYAQTIRQQWAKMGVSVDYNRERFTLDEGLNKSV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             +  +L  +G +Y G          Q    D + +          ++ P++ SD
Sbjct: 157 NKVFVDLYNKGLIYRGEYIINWDPAAQTALSDIEVIHKDVKGAFYHINYPVVGSD 211


>gi|309378324|emb|CBX23070.1| isoleucyl-tRNA synthetase [Neisseria lactamica Y92-1009]
          Length = 929

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 112/367 (30%), Gaps = 56/367 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +       H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGGLHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQKIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----LKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVI 509
                 +Y R R+            DF+     V   E  E D   L L   L       
Sbjct: 654 ------SYRRIRNTLSFLFANLS--DFNPIEDAVPQAEMVEIDRYALVLARRLQ------ 699

Query: 510 ENATIAQEPYKLAFYLYDLA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           E       P     Y +  A               +    ++ RL   QA++R     + 
Sbjct: 700 ERVAGDFYP----RYAFHFAVKEMVSFCSEDLGAFYLDILKD-RLYTTQADSRARRSAQT 754

Query: 561 QLVHAVA 567
            L H   
Sbjct: 755 ALYHITR 761


>gi|161869382|ref|YP_001598549.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082328|sp|A9M1J7|SYI_NEIM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161594935|gb|ABX72595.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 929

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511504|sp|C5D8P2|SYI_GEOSW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 923

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 120/341 (35%), Gaps = 73/341 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   ELL    E KW+P   +  +  M++  R D      +A  +   +F  E     G
Sbjct: 415 DKIRGELLQAIKETKWIPEWGEIRIHNMIRD-RGDWCISRQRAWGVPIPVFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG   P         ++D   + F S
Sbjct: 470 EPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKEIDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++ D        DL       +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 ---GSSHQAVLVERD--------DL-------QRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +    V++++G+D +R  +      
Sbjct: 570 AVTGKAPYKAVLSHGFV---LDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR          FD  P       +E  
Sbjct: 627 ADVRISDSILKQVAE---------VYRKIRNTFRFMLGNL----FDFNPETDAVPVNELR 673

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
             +  +IV L      +++A             YD AS++H
Sbjct: 674 EVDRYMIVKLNHLIENVKHAYET----------YDFASIYH 704


>gi|168187465|ref|ZP_02622100.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294617|gb|EDS76750.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 646

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 117/341 (34%), Gaps = 74/341 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    +  D +A     +GY+       ++ G +I  LA             
Sbjct: 15  PSAKLHIGNTYTTIAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEG----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  Y+  +  ++ D +  +++N   +K++    DY ++ + KI +     
Sbjct: 64  ------KGITPKAYVDEIVADIKDLW--KIMNVSYDKFIRTTDDYHIETVQKIFKKLYDQ 115

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G        ++    + Y ++      +     
Sbjct: 116 GDIYKGEYEGLYCTPCESFWTETQLVDGKCPDCGRPVEKTKEEAYFFKMSKYADRLIEYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   D  Q   R   + ++  RP             DL   +  ++ G    FD  ++IY
Sbjct: 176 ESHPDFIQPESRKNEMLNNFLRP----------GLQDLCISRTSFDWGIPVSFDEKHVIY 225

Query: 355 VM-----------GSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----- 395
           V            G D      Y K   A    V +   + + +   ++ +  D      
Sbjct: 226 VWIDALSNYITALGYDQENDELYQKYWPANVHLVGKDILRFHTIYWPIMLIALDLPLPKQ 285

Query: 396 ---------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                       KMSK  G+ +    +V+E G+D VR+ +L
Sbjct: 286 VFGHGWLLVDGGKMSKSKGNVVDPVTLVNEFGTDPVRYYLL 326


>gi|33303705|gb|AAP22260.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 411

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 108/344 (31%), Gaps = 76/344 (22%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V GD +A      GY V      ++ G +I   A  +               
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL--------------- 45

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +   +I  
Sbjct: 46  --NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQGDIYL 101

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +                ++D +     V   +             +  +   FR   +
Sbjct: 102 DEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFFR---M 155

Query: 317 GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------FDNMI 353
           G  VDR L   + +  +                    DLA  +  ++ G        ++I
Sbjct: 156 GKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVI 215

Query: 354 YVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV                ++   Y K   A    V ++  + + +   ++ +  D     
Sbjct: 216 YVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPK 275

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                        KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 276 KVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 319


>gi|15217136|gb|AAK92527.1|AF401045_3 valyl-tRNA synthetase [Lactobacillus sakei]
          Length = 189

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  N        +I     N TG +H+GH     + D L   
Sbjct: 12  DPNQVEDGRYQDWLKEDLFKPNANPDAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V            ++   ++   + +  L             G+    +G+E 
Sbjct: 72  KRMQGYDVL-------WLPGMDHAGIATQAKVEAKLAE----------QGISRYDLGRE- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                 I D    + +  D          G    +
Sbjct: 114 --KFIDQVWEWKDE-------------YAATIHDQWAKMGLSLDYSRERFTLDDGLSDAV 158

Query: 274 RDIIDNLARQGYVYEGIL 291
           R +  NL  +G +Y G  
Sbjct: 159 RKVFVNLYNKGLIYRGEY 176


>gi|84393572|ref|ZP_00992325.1| isoleucyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375781|gb|EAP92675.1| isoleucyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 952

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 43/309 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H   P+ I  +   + 
Sbjct: 450 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETSELHPDSPALIEKVAKLVE 509

Query: 282 RQGYVYEGILPPPKSKTTQKCD-----MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            +G      +   +    +  D     +D   + F S +    V       D    Y   
Sbjct: 510 EKGIQAWWDVDAAELMGAEDADKYEKVLDTLDVWFDSGVTHFSV------VDSREEYNFP 563

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +        ER     +Y+ GSD   G+ +     + A+ ++     VL    V    DG
Sbjct: 564 N-------EERTHSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DG 613

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +       
Sbjct: 614 NGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTNEVAVS-DEILKRSAD------- 665

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATI 514
            AY R R+  R       +L+      +++P E         +     A+    I  A  
Sbjct: 666 -AYRRIRNTAR---FFLANLNGFNPETDLVPAEEMVALDRWAVGRAQAAQ--EEIVKAYG 719

Query: 515 AQEPYKLAF 523
               + +  
Sbjct: 720 EYNTHGVTQ 728


>gi|116491375|ref|YP_810919.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116092100|gb|ABJ57254.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 902

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 69/212 (32%), Gaps = 34/212 (16%)

Query: 95  PSYLRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             + ++ L +  V    +  +   G+    +I     N TG +H+GH     + D L   
Sbjct: 21  DHWQQEELFNPDVDKKLKPAKYADGQPEAYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L  +          G+    +G+E 
Sbjct: 81  KRMQGYDTL-------WLPGMDHAGIATQAKVEARLRED----------GISRYDLGRE- 122

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                II++    + +  D         +G    +
Sbjct: 123 --KFVDKVWQWKDE-------------YASIIKEQWAKMGLSLDFSRERFTLDKGLNEAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L ++G +Y G          +    D
Sbjct: 168 RKVFVDLYKKGLIYRGEYIINWDPQARTALSD 199



 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 74/208 (35%), Gaps = 32/208 (15%)

Query: 245 IRDDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             D  +        ++       G   P+  RD  +        Y G+  P     TQ  
Sbjct: 407 FEDTYQTWMNNIHDWVISRQLWWGHRIPAWYRDTKEGEKE---TYVGLTAPKGDGWTQDP 463

Query: 303 DMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           D+        L   ST+   D +     SD    Y  + +         G+D +I+    
Sbjct: 464 DVLDTWFSSALWPFSTLGWPDTNN----SDYKRFYPTSTMVT-------GYD-IIFFW-- 509

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                + R+   A   +  +   NVL+  L+   RD    KMSK  G+ I    V+++ G
Sbjct: 510 -----ISRMIFQAKEFTGTRPFKNVLIHGLI---RDSKGRKMSKSLGNGIDPMDVINKYG 561

Query: 419 SDSVRFMMLWRKNS-ELLDFDFCKVKEQ 445
           +D++R+ +       + L+F   K+   
Sbjct: 562 TDALRWFLSTGSTPGQDLNFSNDKMDSA 589


>gi|319400980|gb|EFV89199.1| valyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 876

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K      VS   +  +         I     N TG +H+GH     + D +  +
Sbjct: 8   DPREVEKGRYEEWVSNGYFKPSEDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+      ++ AG         +  + +  +  N+  +               + 
Sbjct: 68  KRMQGYDTLYLPGMDHAG---------IATQAKVEVKLNEQGISRHDLGREKFLQQAWDW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y++                         IR     L +  D          G    +
Sbjct: 119 KEEYAT------------------------FIRQQWAKLGLGLDYSRERFTLDDGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 155 RKVFVDLYNKGIIYRGERIINWDPKARTALSD 186



 Score = 37.2 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       ++++   +VLL  LVR   DG   KMSK  G+
Sbjct: 479 TGYD-IIFFW-------VARMIFQGLEFTDRRPFNDVLLHGLVR-AEDGR--KMSKSLGN 527

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSEL 434
            +    V+DE G+DS+R+ +    +   
Sbjct: 528 GVDPMDVIDEYGADSLRYFLATGSSPGH 555


>gi|257867079|ref|ZP_05646732.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873414|ref|ZP_05653067.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257877159|ref|ZP_05656812.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801135|gb|EEV30065.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807578|gb|EEV36400.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257811325|gb|EEV40145.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 668

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 120/351 (34%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEKKAEEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   ++   L+   +K++    DY  +A+ KI +  L  
Sbjct: 66  -------GVDPQEYVDKMAADVKKLWN--TLDISYDKFIRTTDDYHKKAVQKIFQQLLDQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   +++ + S  D      + + ++  +   +      ++        +   +    
Sbjct: 117 GDIYLGEYEGWYSVSDEEYFTETQLAEVYRDEEGK------VIGGKAPSGHEVELVKESS 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             FR +      DR +   D    +                    DLA  +  ++ G   
Sbjct: 171 YFFRMSKY---ADRLVEYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPV 227

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
               ++++YV              GSD     ++   A    V ++  + + +   ++ +
Sbjct: 228 TASPEHVVYVWIDALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+    D++R+ +L 
Sbjct: 288 ALDLPLPKKIFGHGWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLR 338


>gi|240141544|ref|YP_002966024.1| valine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240011521|gb|ACS42747.1| valine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 906

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 68/243 (27%), Gaps = 34/243 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +S+    G  +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFDPAAVEARVSAAWEEGQAFRAGRPERAGAEPFSIVIPPPNVTGSLHMGHALNNTIQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 65  LVRFERMRGRDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L +           E++L  V  +  ++   II   LK L    D          G 
Sbjct: 94  ERKLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQ-LKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +     +L  QG +Y            Q    D +             D P++   G
Sbjct: 153 SRAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPVVDEAG 212

Query: 330 SYT 332
           + T
Sbjct: 213 TPT 215



 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +   ++++     V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 515 WVARMMMMGLHLTDQAPFETVYLHTLV---RDEKGAKMSKSKGNVVDPVDLIDRFGADAL 571

Query: 423 RFMM 426
           RF +
Sbjct: 572 RFTL 575


>gi|48477156|ref|YP_022862.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48429804|gb|AAT42669.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 455

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 130/396 (32%), Gaps = 50/396 (12%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 ++NI           H+GH R  +  DT+   M   GY V              
Sbjct: 15  KPMHKNRINIFVCGPTVYDDFHLGHARTYIFFDTIVKFMRSIGYSVF------------- 61

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                    Y Q + + D  +         +K    E  D+   E+ N    ++L I+ +
Sbjct: 62  ---------YLQNITDIDDKI---------IKRAHDE--DRSPEEIANRYFNEYLRIMSE 101

Query: 236 YSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             + ++    R  L    I   I  + E  +       +   +      G + +  L   
Sbjct: 102 LGIDSVNYYARATLYIDEIISQIKRMIEKGYAYETSDGVYFCVRKFRDYGELSKQNLDNI 161

Query: 295 KSKTTQKCDMDRKQ-----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                   + D++      L  +        + P  K  G   +   D A  +  +   +
Sbjct: 162 IENARGILNEDKRNPEDFVLWKKMKPGEPYWESPWGK--GRPGWHIEDTAITETYFGDEY 219

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D    + G          EA  A +     +  +    +     +    KMSK   ++IT
Sbjct: 220 D----IHGGGSDLIFPHHEAEIAQMRSISNKRYLAHYWIHTGMINVNREKMSKSLKNYIT 275

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           ++ V+ E   + +RF +L    +  ++F    + E  +   +  +   Y + + I  ++ 
Sbjct: 276 IKDVLKEYKPNELRFAVLNANFNTSIEFSMDSLNESRE--ALSRIINTYRKLKKIDSESG 333

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           D   D D+ +     I  ++ FDT    LI  L ++
Sbjct: 334 DYMVDSDYIIKRYMDIMSDN-FDT--RSLIRELMDF 366


>gi|327266386|ref|XP_003217987.1| PREDICTED: valyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 983

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 60/198 (30%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +             L  K    ++     N TG +H+GH     + D L 
Sbjct: 28  YVEAAWYAWWVKEGFFKPEYQHHLLNQKPETFSLSIPPPNVTGSLHLGHALTVAIEDALV 87

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+V      + AG     +     W+                  GV  K + +
Sbjct: 88  RWKRMQGYKVLWVPGSDHAGIATQVVVEKKIWKE----------------QGVRRKELTR 131

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E    +  E+ N+ EEK   I +   V            +L+     F  +  F      
Sbjct: 132 E---AFLQEIWNWKEEKGNEIFQQLKVMG---------ASLDWDRVCFTMDSRF----SQ 175

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L  QG VY  
Sbjct: 176 AVTEAFVRLHEQGLVYRD 193


>gi|313674935|ref|YP_004052931.1| valyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941633|gb|ADR20823.1| valyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 875

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS L        +    +      K     I     N TG +H+GH     + D L   
Sbjct: 8   NPSDLEDKWYKHWMEQKFFASKPDPKKEPYTIVIPPPNVTGVLHMGHMMNNTIQDVLIRR 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E             ++  +++   +    L   +  + +             E 
Sbjct: 68  ARMQGKEAC-------WVPGMDHASIATEAKVVNMLK--EKGINKNEISRDEFMKHAWEW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II   LK L    D             + +
Sbjct: 119 KEKYG------------------------GIILQQLKKLGASCDWDRERFTMEEDMSAAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++  +L ++GY+Y G          +    D +
Sbjct: 155 IEVFVDLYKKGYIYRGTRMVNWDPEGKTALADDE 188


>gi|313123426|ref|YP_004033685.1| valyl-tRNA synthetase (valine--tRNA ligase) (valrs) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279989|gb|ADQ60708.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 879

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   K    +I     N TG +H+GH     + DTL   
Sbjct: 9   NPQEVEAGRYQEWLDEDLFKPSGNKKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   + +  L             GV    +G+  
Sbjct: 69  KRMQGYD--TLYLPG-----MDHAGIATQAKVEARLRE----------QGVSRYDLGR-- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++  + +E                II+   + L +  D         +G    +
Sbjct: 110 -KKFVEKVWEWKDE-------------YANIIKSQWQKLGLSLDYSRERFTLDKGLSKAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L  +G +Y G          +    D
Sbjct: 156 RRVFVQLYNEGLIYRGEYIINWDPKLRTALSD 187



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 18/100 (18%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            G+D +I+   S     S +            E+     VL      L RD    KMSK 
Sbjct: 480 TGYD-IIFFWVSRMIFQSLHFT---------GERPFDNVVLHG----LIRDEQGRKMSKS 525

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            G+ I    V+D+ G+D++R+ +L      +   F + K+
Sbjct: 526 LGNGIDPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKM 565


>gi|254804338|ref|YP_003082559.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667880|emb|CBA03973.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 929

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|238692249|sp|B3CST4|SYE2_ORITI RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
          Length = 474

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 103/314 (32%), Gaps = 65/314 (20%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
               +   + +PTG +H+G  R A+     A       L+     +  R         + 
Sbjct: 1   MTNIVTRFAPSPTGFLHIGGARTALFNYLFARHHKGKFLLRIEDTDAARS-------TEE 53

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKYSSELLNFPEEKWLP 231
             L +    ++ +  ++ND      +Y    L+    V  EL  K       F  ++ + 
Sbjct: 54  YKLGIIDSLKWLKINWDNDI-----FYQSANLQRHVNVALELV-KSGKAYYCFTSQEEID 107

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + +  ++      I       NI                         L      Y    
Sbjct: 108 LQRQLAIAQKQSFIFRSPWRNNIP-------SSLS-------------LKNNNKAYVIRF 147

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P   TT   D  + +++F++  +    D  L++SDG+ TY    LA     ++ G  +
Sbjct: 148 KAPNHGTTIINDYVQGKVVFQNQQID---DMILVRSDGTPTYM---LAVVVDDHDMGITH 201

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I   G DH     +  A+  A+  K   +       + L       K+SKR G      
Sbjct: 202 IIR--GDDHLTNAAKQIALYDALGWKAPAMVH-----IPLIYGPDGTKLSKRHG------ 248

Query: 412 HVVDEVGSDSVRFM 425
                +G D+ + M
Sbjct: 249 ----AIGVDAYQKM 258


>gi|228475262|ref|ZP_04059987.1| glutamate--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270727|gb|EEK12136.1| glutamate--tRNA ligase [Staphylococcus hominis SK119]
          Length = 484

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 97/301 (32%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W       + D D   G Y       +   L  +   E   +   K     ++   +
Sbjct: 64  --KWLGLDWDESIDKDKGHGPYRQSERADIYNPLIQQLLDEDKAY---KCYMTEEELEEE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +I R ++     +H     E                    +G         PK KT 
Sbjct: 119 REAQIARGEMPRYGGKHAHLTEEQR-------------QQFEAEGRKPAIRFRVPKDKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G 
Sbjct: 166 TFDDMVKGEISFDSNNIGDW---VIVKKDGVPTYN------FAVAVDDHYMEISDVIRGD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEPPRFAHM-----SLIVNEQRKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|16799293|ref|NP_469561.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|25009380|sp|Q92F90|SYM_LISIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16412635|emb|CAC95449.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 664

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 76

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 77  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 136

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 137 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 196

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 197 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 251

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 252 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 307

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 308 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 913

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHQGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|326335982|ref|ZP_08202159.1| isoleucyl-tRNA synthetase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691946|gb|EGD33908.1| isoleucyl-tRNA synthetase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 1138

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 113/295 (38%), Gaps = 45/295 (15%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCD---MD 305
             I   I+ +ED         + +++D +++    G++ E      K     + +   +D
Sbjct: 523 WGIPLPIWRTEDSKEEKIIGSVAELMDEISKSIAAGFMKENPFNGFKVGDMSEENYNKID 582

Query: 306 RKQLLFRSTMVGDDVDRPLLK-SD-------------GSYTYFAADLAYFKCKYERGFDN 351
             + +  + ++  D  +P+ + SD                 Y   +    + +     D 
Sbjct: 583 LHKNIVDTIILVSDSGKPMKRESDLIDVWFDSGSMPYAQVHYPFENKELIESRKAFPADF 642

Query: 352 MIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +    G D   G+   L A+A +V +  A  NV+   LV    D    KMSKR G+ +  
Sbjct: 643 IAE--GVDQTRGWFYTLHAIATSVFDSVAYKNVMSNGLV---LDKNGQKMSKRLGNAVDP 697

Query: 411 RHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA 468
              + + G+D+ R+ M+   N  + L FD   ++E + K     Y  Y++          
Sbjct: 698 FETLAKYGADATRWYMISNANPWDNLKFDVEGIEEVRRKFFGTLYNTYSFF--------- 748

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSEL---QLIVHLAEYPRVIENATIAQEPYK 520
             ++ +LD   +    +P E   +       +L   +A+    ++ A +  EP +
Sbjct: 749 -ALYANLDGFTYAEAEVPLEKRPEIDRWILSELHTLIAK----VKEAFLDYEPTR 798


>gi|310778382|ref|YP_003966715.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747705|gb|ADO82367.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 884

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 78/240 (32%), Gaps = 16/240 (6%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  +         +   +   +  +    +I     N TG +H+GH     + DT+   
Sbjct: 9   SPKEIEDKWYQDWENNGYFSATMDEEKPNYSIVIPPPNVTGILHMGHVLNNTIQDTIIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY    +   + AG  I T         +Q L   D                  E 
Sbjct: 69  KRMSGYNTLWQPGTDHAG--IATQNKVERKLAEQGLKKED-------LGREKFLEKVWEW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL--NIQHDIFISEDDFH----- 266
            D++   + N   +    +  +     M + + D +K +   + +D  I + ++      
Sbjct: 120 KDEHGGLITNQLRKLGASLDWERERFTMDEGLSDSVKEIFVKLYNDDLIYQGEYMVNWCP 179

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R   +   D +D+  ++G ++    P   S         R + +   T V  + D    K
Sbjct: 180 RCGTALADDEVDHEEKKGSLWHIKYPIKDSDENFVIATTRPETMLGDTGVAVNPDDERYK 239



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 45/236 (19%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I      L  + RD    KMSK  G+      ++
Sbjct: 486 VTGAD-ILFFWVARMIMMGL-YEMEEIPFETVYLHGIVRDENGKKMSKSLGNSPDPLKLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DE G+D++RF ML+   S+  D  F +   +   N          +  ++ R        
Sbjct: 544 DEYGADAIRFTMLY-NTSQGQDVHFSEKLIEMGRNFA-------NKTWNVSRFVLMNLEG 595

Query: 475 LDFDLFPRNVIPQE-------SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
            D     +N +  E       S+F+ +   +   L +    ++ A  +         +Y+
Sbjct: 596 FDIKSVGKNELKLELVDKWIFSKFNKTAKDVAAKLDK--NTLDEAAKS---------VYE 644

Query: 528 -LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
            L   F   +    E  ++R   A +         +    A      I+ S L ++
Sbjct: 645 FLRGDFCDWY---VEMAKVRLYNAEDE--------VSKKTAQYVLWTILESSLRLL 689


>gi|154506267|ref|ZP_02043005.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149]
 gi|153793455|gb|EDN75875.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149]
          Length = 639

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 132/427 (30%), Gaps = 64/427 (14%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R  +       I    A  +G  H+G+    ++ D +A      GY+V  +   ++ G +
Sbjct: 4   RREMADKKPYYITTAIAYTSGKPHIGNTYEIILADAIARYKRSQGYDVFFQTGTDEHGQK 63

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           I   A       ++ + N   ++         +  +     DK+        E++   I 
Sbjct: 64  IELKAEEAGVTPKEFVDNVSGEIK-------KIWDLMDTSYDKFIRTTDEDHEKQVQKIF 116

Query: 234 KDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           K    Q    I +   + +     + F +E     G        +     + Y ++    
Sbjct: 117 KKLYDQG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKY 174

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---- 348
             +         +  Q + R   + ++   P             DL   +  ++ G    
Sbjct: 175 ADRLIEHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVD 224

Query: 349 FD--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           FD  ++ YV                 G+    + K   A    + +   + + +   +  
Sbjct: 225 FDPKHVTYVWLDALTNYITGIGYDCDGNSTEQFHKLWPADLHLIGKDIIRFHTIYWPIFL 284

Query: 391 LYRD--------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELL 435
           +  D        G P       KMSK  G+ +    +VD  G D+VR+ +L         
Sbjct: 285 MALDLPLPKQVFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDG 344

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQE 488
              +  + E+   +    +     R  S+  +        K +  ++D DL        +
Sbjct: 345 VITWELMVERMNSDLANTLGNLVNRTVSMTNKYFSGTVTDKGVAEEVDADLKAVTESTPK 404

Query: 489 SEFDTSE 495
           +  D  E
Sbjct: 405 AVEDKME 411


>gi|90961208|ref|YP_535124.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius UCC118]
 gi|90820402|gb|ABD99041.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Lactobacillus salivarius UCC118]
          Length = 675

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 117/351 (33%), Gaps = 83/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V      ++ G +I   A ++  +       
Sbjct: 16  PSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQKAQALGMQ------- 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++ + +    L    +K++    DY  +A+  I    L  
Sbjct: 69  ----------PQEYVDKMAADIKELWKK--LEITNDKFIRTTDDYHEKAVQNIFEKLLAK 116

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I    +  + S  D      S + ++  +          ++        +   ++   
Sbjct: 117 GDIYLGKYRGWYSVSDEEYFTESQLAEVYRDEDGN------MIGGKAPSGHEVQLVEEDC 170

Query: 309 LLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERG------ 348
             F+ +   D          D   P  + +     F      DLA  +  +  G      
Sbjct: 171 YFFKMSKYADRLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSN 230

Query: 349 FDNMIYVM---------------GSDHSGYVKRLEAVAAAVSEKKAQIN----------- 382
            ++++YV                G D S + K   A    V ++  + +           
Sbjct: 231 PEHVVYVWIDALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMAL 290

Query: 383 ------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                  ++     L RDG   KMSK  G+ +    +V+  G D++R+ ++
Sbjct: 291 DLPLPKHIIGHGWLLMRDG---KMSKSKGNVVYPEMIVERYGLDALRYYLM 338


>gi|315651962|ref|ZP_07904964.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485791|gb|EFU76171.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  +   +    + G  +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYSPQKIEGKIYKKWLEGKYFHAKVNKDKKPFTIIMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GY                           +AL+   +D          ++ +  
Sbjct: 67  RYKRMAGY---------------------------EALWQPGTDHAAIATEVKVIEKIKA 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  +K+         EK+L     +      +II   L+ L    D              
Sbjct: 100 EGKNKH-----ELGREKFLKEAWAWKNDYGTRIINQ-LQRLGSSADWDRERFTMDEHGQR 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++++   L  +GY+Y+G
Sbjct: 154 AVKEVFVKLYEKGYIYKG 171


>gi|255066104|ref|ZP_05317959.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049649|gb|EET45113.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 826

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 107/331 (32%), Gaps = 55/331 (16%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 331 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 390

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  I   +  +G      L   +    + C+   K        + D +D  +    GS 
Sbjct: 391 LLEKIALKIEEKGIEAWFSLDKSELLNAEDCENYDK--------LSDTMD--VWFDSGST 440

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 441 HYSV-----LKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 495

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 496 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 550

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE----- 504
                 +Y R R+            DFD F   V   +  E D   L L   L E     
Sbjct: 551 ------SYRRIRNTLSFLFANLS--DFDPFEHTVPQADMVEIDRYALVLARQLQERLAGD 602

Query: 505 -YP---------RVIENATIAQEPYKLAFYL 525
            YP          ++   +        AFYL
Sbjct: 603 FYPRYAFHFAVKDIVAFCSEDLG----AFYL 629


>gi|239637538|ref|ZP_04678510.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596756|gb|EEQ79281.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 876

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 54/191 (28%), Gaps = 34/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYDEWVKNGYFKPSEDTNKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           ++    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  FD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDIGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S                         IR     L +  D          G    ++ +  
Sbjct: 124 S------------------------FIRKQWAKLGLGLDYSRERFTLDDGLSKAVKKVFV 159

Query: 279 NLARQGYVYEG 289
           +L  +G +Y G
Sbjct: 160 DLYNKGIIYRG 170


>gi|213966169|ref|ZP_03394355.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951184|gb|EEB62580.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 911

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 79/266 (29%), Gaps = 39/266 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 19  NPADVESDLYQGWVDAGYFEADPSSSKPAYSIVLPPPNVTGQLHMGHALDHTLMDALVRR 78

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++   +                        V   L
Sbjct: 79  KRMQGYEVL-------WLPGMDHAGIATQTK------------------------VEAML 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D    +  ++  E+++  V ++      + I + ++ +    D          G    +
Sbjct: 108 KDSEGKDRFDYGREEFVEKVWEWKHDYGGR-IGNQMRQIGDSLDWSRERFTLDEGLSRAV 166

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD------RKQLLFRSTMVGDDVDRPLLKS 327
           + I   L  +G +Y        S   Q    D        +    S   GD  D  ++ +
Sbjct: 167 QTIFKELFDRGLIYRAKRMVNWSPVLQTAISDIEVKYEDAEGELVSFRYGDGEDSIVVAT 226

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
               T    D+A      +  + +++
Sbjct: 227 TRVET-MLGDVAIAVHPEDERYTHLV 251


>gi|154249365|ref|YP_001410190.1| glutamyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|229470566|sp|A7HKV0|SYE1_FERNB RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|154153301|gb|ABS60533.1| glutamyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 469

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 104/291 (35%), Gaps = 43/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R             L  ++ 
Sbjct: 9   APSPTGYLHVGGARTALFNYLYARKTGGKFILRIEDTDLERS-----EKVFEEQLISALK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D     G   G Y +     L  +Y+ +L+           + Y+    +
Sbjct: 64  WLGLEWDEGPD----IGGQYGPYRQSERVHLYHEYAQKLIEEG-----KAYEVYAYPEEI 114

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +R+ L  L+       + +     +    +   +    +  VY  +L     K     
Sbjct: 115 EQLREKL--LSEGKAPHYTREMLEPYNTPERKKEYEEKGLKPAVYFSMLR----KDYVIN 168

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDH- 360
           D+ + +++F++  VGD     LL+S+G  TY       + C  + G   + +V+ G DH 
Sbjct: 169 DVVKGEVVFKAGSVGDF---ALLRSNGMPTYN------YACVIDDGLMKITHVLRGDDHL 219

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           S  VK++ A+  A               V +       K+SKR G      
Sbjct: 220 SNTVKQV-ALYEAFGWPTPVFGH-----VSMILGPDGSKLSKRHGATSVEE 264


>gi|110802251|ref|YP_699196.1| valyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110682752|gb|ABG86122.1| valine--tRNA ligase [Clostridium perfringens SM101]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173



 Score = 37.2 bits (85), Expect = 8.4,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+DE G+D++RFM++          D   + E+ +     
Sbjct: 520 RDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGN---DIRYIPERVEA---- 572

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
               A      I+  ++ +  +LD +L        +   D  E  L     L+    +I+
Sbjct: 573 ----ARNFANKIWNASRFVMMNLDRELM-------DKYKDCKEYSLADKWILSRMNSLIK 621

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGH----WSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             T   E      Y   +A    H      +           +  ++ K       + + 
Sbjct: 622 EVTENME-----KYELGIALQKVHDFLWTEFCDYYIELVKPVLYGDDEKAKG---VVFNV 673

Query: 566 VASIINSGLNII 577
           + +++N+GL ++
Sbjct: 674 LYTVLNTGLKLL 685


>gi|18310901|ref|NP_562835.1| valyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|81766834|sp|Q8XJ42|SYV_CLOPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18145583|dbj|BAB81625.1| valine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173


>gi|303231399|ref|ZP_07318133.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513995|gb|EFL56003.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 885

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIESKWYSYWENQGYFHEEVDTDKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWGRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  +  
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEEG 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVIVATTRPETMFGDVAVAVNPEDDRYKDLI 246



 Score = 38.4 bits (88), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 56/154 (36%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+ E G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P E++   ++  ++    +Y   + + T   
Sbjct: 598 SFVPTEADLTLADKWIV---EKYNETVASITANL 628


>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 921

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 67/347 (19%), Positives = 117/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFC 710


>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824207|sp|Q636D1|SYI1_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 921

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHQGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|23009422|ref|ZP_00050476.1| COG0060: Isoleucyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 570

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 87/253 (34%), Gaps = 35/253 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAAD- 337
           V   I      +       D     F +            DV      S  ++ +   D 
Sbjct: 331 VNARIAEAFAQEGADAWFADGAAERFLAPDYDPANYEKVTDVLDVWFDSGSTHAFVLDDP 390

Query: 338 -----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVR 390
                LA  +   + G D ++Y+ GSD   G+ +    +  +   K  A  +V+L     
Sbjct: 391 QAFPGLAGIRRAVDGGPDRVMYLEGSDQHRGWFQSS--LLESCGTKGYAPYDVVLTHGFV 448

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  D    KMSK  G+ +  ++V+ E G+D +R  +     S+ L      VK  ++   
Sbjct: 449 L--DAKGEKMSKSRGNVVAPQNVIKESGADILRLWVAAADYSDDLRIGPEIVKTFAE--- 503

Query: 451 VFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  Y + R+  R     +   +  D      +P+       E  ++  LA+    I
Sbjct: 504 ------TYRKLRNSLRWLLGSLAHRVPGDDVALAEMPEL------ERFILHRLAQLDGEI 551

Query: 510 ENATIAQEPYKLA 522
             A  A +  ++ 
Sbjct: 552 REAYAAFDTKRIV 564


>gi|323704236|ref|ZP_08115815.1| glutamyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536302|gb|EGB26074.1| glutamyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 480

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 98/290 (33%), Gaps = 50/290 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R       G  +  +   + 
Sbjct: 9   APSPTGNLHIGGARTALFNWLFARHNNGKLILRVDDTDLERS-----TGDSMKAILDGLK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W            L   +  G   +    E+  KY+ EL+   +  +      +  +  +
Sbjct: 64  W------------LGIDWDEGPLYQSKRLEMYKKYADELVIQGKAYYC-----FCTKEEL 106

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            I+R + +               + G   +   D +     +G  Y   L  PK   T  
Sbjct: 107 DIMRSEAQKAGKP--------SMYTGKCRNLSPDEVKKYMDEGKKYVVRLKVPKEGKTVV 158

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R  + F ++   D +   ++KSD   TY   + A     Y+    ++I   G +H 
Sbjct: 159 HDIIRGDVEFDNSTFDDFI---IMKSDNMPTY---NFATVIDDYDMEISHIIR--GEEHL 210

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               +   +  A+  +K +        V +       K+SKR G      
Sbjct: 211 SNTPKQILIYEALGFEKPEFAH-----VSMILAPDRSKLSKRHGATSVQE 255


>gi|309806509|ref|ZP_07700513.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167108|gb|EFO69283.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 499

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D     G   G Y +   K++ +KY  +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y+    ++  R++ +A+ I         ++       I+        +G      +
Sbjct: 106 AYYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A +    +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|296117462|ref|ZP_06836049.1| isoleucyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295975983|gb|EFG82774.1| isoleucyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 957

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 92/291 (31%), Gaps = 45/291 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAADLAY 340
           V + ++    ++                    DD ++     D     GS        A+
Sbjct: 519 VMKRVVDAFAAEGADAWYASPASRFLGEGRNPDDYEQVFDIVDVWFESGSTH------AF 572

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPI 398
                +  F   +Y+ GSD   G+ +    +  +V  K  A    L+     L   G   
Sbjct: 573 VLGHGDMPFPADVYLEGSDQHRGWFQSS--LLESVGTKGIAPFRTLVTNGFVLDEQGR-- 628

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ I  + V D +G+D +R  ++    +E L      +K+Q +          Y
Sbjct: 629 KMSKSLGNVIAPQDVNDSLGADILRLWVMNSDTNEDLRIGKDILKQQGEL---------Y 679

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE- 517
            R R+  R           D F  +      +    E  ++  L E   ++  A    E 
Sbjct: 680 RRLRNTLRWLLGA-----LDGFAEDERVAYDDLPELERWVLHRLGELGGLVARAVETHEW 734

Query: 518 ------PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                  +         A+     +   R++       A++ K    R  L
Sbjct: 735 VGVYPALHGFC------AADLSAFYFDVRKDTIYCDA-ASSLKRRAARTVL 778


>gi|189183880|ref|YP_001937665.1| glutamyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189180651|dbj|BAG40431.1| glutamyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 482

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 103/314 (32%), Gaps = 65/314 (20%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
               +   + +PTG +H+G  R A+     A       L+     +  R         + 
Sbjct: 9   MTNIVTRFAPSPTGFLHIGGARTALFNYLFARHHKGKFLLRIEDTDAARS-------TEE 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKYSSELLNFPEEKWLP 231
             L +    ++ +  ++ND      +Y    L+    V  EL  K       F  ++ + 
Sbjct: 62  YKLGIIDSLKWLKINWDNDI-----FYQSANLQRHVNVALELV-KSGKAYYCFTSQEEID 115

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + +  ++      I       NI                         L      Y    
Sbjct: 116 LQRQLAIAQKQSFIFRSPWRNNIP-------SSLS-------------LKNNNKAYVIRF 155

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P   TT   D  + +++F++  +    D  L++SDG+ TY    LA     ++ G  +
Sbjct: 156 KAPNHGTTIINDYVQGKVVFQNQQID---DMILVRSDGTPTYM---LAVVVDDHDMGITH 209

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I   G DH     +  A+  A+  K   +       + L       K+SKR G      
Sbjct: 210 IIR--GDDHLTNAAKQIALYDALGWKAPAMVH-----IPLIYGPDGTKLSKRHG------ 256

Query: 412 HVVDEVGSDSVRFM 425
                +G D+ + M
Sbjct: 257 ----AIGVDAYQKM 266


>gi|169343256|ref|ZP_02864267.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182624314|ref|ZP_02952099.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|169298554|gb|EDS80635.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|177910532|gb|EDT72905.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 645

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 117/348 (33%), Gaps = 78/348 (22%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    +H+G+    V  D +A     +G+EV      ++ G +I  +A        
Sbjct: 14  YPSTN----LHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE------ 63

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +
Sbjct: 64  -----------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFK 110

Query: 247 DDLKALNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 +I  D +             E     G+       ++    + Y ++      +
Sbjct: 111 KLYDQGDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADR 170

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD- 350
                +   D  Q   R   + ++  RP             DL   +  +  G    FD 
Sbjct: 171 LIQYIEEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDE 220

Query: 351 -NMIYVM-------------GSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++IYV              G +    Y K   A    + +   + + +   ++ +    
Sbjct: 221 KHVIYVWIDALSNYITALGYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGL 280

Query: 396 M--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                            KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 281 ELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|42518492|ref|NP_964422.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227888796|ref|ZP_04006601.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|268318911|ref|YP_003292567.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|67461828|sp|Q74L27|SYE_LACJO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|41582777|gb|AAS08388.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227850633|gb|EEJ60719.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|262397286|emb|CAX66300.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|329666763|gb|AEB92711.1| glutamyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 499

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 111/309 (35%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D    +G   G Y +   K++ +KY  +L++        
Sbjct: 59  SQMENL----HWLGIDWDEGPD----KGGDFGPYRQSERKDIYNKYIQQLIDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y  +  ++  R++ +A+ I         ++       I++       +G      +
Sbjct: 106 AYYSYKTEEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKEAQAAAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+++T    DM + ++ F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPENRTYAWEDMVKGKVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A+  +  +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEALGWEPPKFGH----MTLIINSETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|288941820|ref|YP_003444060.1| valyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897192|gb|ADC63028.1| valyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 947

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 68/239 (28%), Gaps = 34/239 (14%)

Query: 94  SPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            P  L           G               I     N TG +H+GH     + D L  
Sbjct: 7   DPQTLEAHWYRHWEERGHFVPAASDAGNGAYCIMIPPPNVTGSLHMGHAFQDTIMDALTR 66

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G                           +Q L+   +D       G+  + V + 
Sbjct: 67  YHRMKG---------------------------EQTLWQAGTDHA-----GIATQMVVER 94

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L +       ++  + ++  + ++  ++   I R  L+ +    D          G    
Sbjct: 95  LIEAEGQTRHDYGRDAFIERIWEWKAESGGAITRQ-LRRMGASLDWAHERFTMDEGLSEA 153

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
           +R++   L  +G +Y G               D + L    +    ++  P+++  G+ 
Sbjct: 154 VREVFVRLYEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEESGFMWEMRYPIVQPPGAA 212


>gi|168208620|ref|ZP_02634245.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170713145|gb|EDT25327.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173



 Score = 37.2 bits (85), Expect = 8.8,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+DE G+D++RFM++          D   + E+ +     
Sbjct: 520 RDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGN---DIRYIPERVEA---- 572

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
               A      I+  ++ +  +LD +L        +   D  E  L     L+    +I+
Sbjct: 573 ----ARNFANKIWNASRFVMMNLDRELM-------DKYKDCKEYSLADKWILSRMNSLIK 621

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGH----WSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             T   E      Y   +A    H      +           +  ++ K       + + 
Sbjct: 622 EVTENME-----KYELGIALQKVHDFLWTEFCDYYIELVKPVLYGDDEKAKG---VVFNV 673

Query: 566 VASIINSGLNII 577
           + +++N+GL ++
Sbjct: 674 LYTVLNTGLKLL 685


>gi|194467624|ref|ZP_03073611.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454660|gb|EDX43557.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 675

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 133/435 (30%), Gaps = 75/435 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      GY+V   +Y+   G              +  L  
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFKRLMGYDV---FYL--TGT------------DEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++ + +    L    +K++    DY  +A+ KI +  L  
Sbjct: 60  EQKAEKLGMKPQEYVDQMAAQIKELWKK--LEITNDKFIRTTDDYHEKAVQKIFQQLLDQ 117

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I    +  + S DD      S + ++  +       G    G       + +    M 
Sbjct: 118 GDIYKGKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMS 177

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDNMIY 354
           +      +         +   R     +        DLA  +  +  G        +++Y
Sbjct: 178 KYADWLMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFTWGVKVPSDPKHVVY 237

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQIN-----------------V 383
           V              GSD     K+   A    V ++  + +                  
Sbjct: 238 VWIDALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKH 297

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
           ++       RDG   KMSK  G+ I    +VD  G D+ R+ +L          F     
Sbjct: 298 IIGHGWLTMRDG---KMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDF 354

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++   +    +     R  ++  + ++   +  +     F  ++    S+      +L+
Sbjct: 355 VDKVNYDLANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELM 414

Query: 500 VHLAEYPRVIENATI 514
                +   +     
Sbjct: 415 DK-TRFAEALAAVWK 428


>gi|33303707|gb|AAP22261.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 418

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 108/344 (31%), Gaps = 76/344 (22%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V GD +A      GY V      ++ G +I   A  +               
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL--------------- 45

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +   +I  
Sbjct: 46  --NITPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQGDIYL 101

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D +                ++D +     V   +             +  +   FR   +
Sbjct: 102 DEYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFFR---M 155

Query: 317 GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------FDNMI 353
           G  VDR L   + +  +                    DLA  +  ++ G        ++I
Sbjct: 156 GKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVI 215

Query: 354 YVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV                ++   Y K   A    V ++  + + +   ++ +  D     
Sbjct: 216 YVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPK 275

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                        KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 276 KVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 319


>gi|325286232|ref|YP_004262022.1| glutamyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321686|gb|ADY29151.1| glutamyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 503

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 99/290 (34%), Gaps = 44/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAF--SGYEVTREYYINDAGAQINTL 177
           + +PTGP+H+G  R A+          GD +  +     + Y    E YI D+       
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKNGGDFILRIEDTDQNRYVEGAEQYIIDSLNWCGI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D    +    G Y +   K L  +Y+ EL+             + 
Sbjct: 69  -------------AFDEGPGKEGKFGPYRQSERKHLYKEYADELIANG-----KAYYAFD 110

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKS 296
               +   R + +A      I+   +     +   + ++ +D        +      P++
Sbjct: 111 TAESLDEHRKNHEANGKTF-IYNWHNRLKLNNSLALSKEEVDTKLANNEPFVIRFKTPEN 169

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  D+ R  +   + ++    D+ L KSDG  TY    LA     +     ++I   
Sbjct: 170 EKLELNDIIRGTMHIDTNVLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR-- 221

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +    +   + +  A   +  +   L   +  + +     K+SKR G+
Sbjct: 222 GEEWLPSLALHKQLYDAFGWQAPEFAHLPLIMKPVGKG----KLSKRDGE 267


>gi|148642335|ref|YP_001272848.1| valyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148551352|gb|ABQ86480.1| valyl-tRNA synthetase, ValS [Methanobrevibacter smithii ATCC 35061]
          Length = 905

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 79/217 (36%), Gaps = 45/217 (20%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ KK   ++++  +V    DG   KMSK  G+ I    V+++ G+D++R         
Sbjct: 525 ALTGKKPFDDIVINGMV-FGEDG--YKMSKSRGNVIAPDEVIEQYGADALRTWAANSVPG 581

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-- 490
             + FD+  +K                      R+  + F  +   +F   V   E +  
Sbjct: 582 SDVIFDWKDIK----------------HGYRFLRKFWNAFRFISMQIFDEEVNYDEIKDN 625

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV--------FHGHWSHGREN 542
           FD  +L ++  L    +V++NA             YD A+         +H       E 
Sbjct: 626 FDPLDLWILSKLNNLNKVVDNAFAN----------YDFATTITSIEKFIWHDFCDEYIEA 675

Query: 543 PRLRFVQAN--NRKLTMMRLQLVHAVASIINSGLNII 577
            + R    +  +      +  L     ++I + L ++
Sbjct: 676 VKYRLYNDDVSDSSRKAAKYTL----RNVIETSLKLL 708


>gi|322379139|ref|ZP_08053536.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380431|ref|ZP_08054633.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147142|gb|EFX41840.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148435|gb|EFX42938.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 815

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + K    I  + + +  +      K  I  +   P+G +H+GH R   +GD LA
Sbjct: 5   TYNPKIIEKKWQEIWANDLAFEPSSDFSKPKKYILSMMPYPSGEVHMGHVRNYAIGDALA 64

Query: 152 SLMAFSGYEV 161
                 GY V
Sbjct: 65  RYYRQVGYNV 74


>gi|313621117|gb|EFR92184.1| methionyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 657

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 913

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHLGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|168215545|ref|ZP_02641170.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182624398|ref|ZP_02952182.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910401|gb|EDT72778.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182382320|gb|EDT79799.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173



 Score = 36.8 bits (84), Expect = 9.5,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+DE G+D++RFM++          D   + E+ +     
Sbjct: 520 RDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGN---DIRYIPERVEA---- 572

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
               A      I+  ++ +  +LD +L        +   D  E  L     L+    +I+
Sbjct: 573 ----ARNFANKIWNASRFVMMNLDRELM-------DKYKDCKEYSLADKWILSRMNSLIK 621

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGH----WSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             T   E      Y   +A    H      +           +  ++ K       + + 
Sbjct: 622 EVTENME-----KYELGIALQKVHDFLWTEFCDYYIELVKPVLYGDDEKAKG---VVFNV 673

Query: 566 VASIINSGLNII 577
           + +++N+GL ++
Sbjct: 674 LYTVLNTGLKLL 685


>gi|168214160|ref|ZP_02639785.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714391|gb|EDT26573.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173


>gi|168204897|ref|ZP_02630902.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170663625|gb|EDT16308.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173


>gi|169343619|ref|ZP_02864618.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298179|gb|EDS80269.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173



 Score = 36.8 bits (84), Expect = 9.2,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+DE G+D++RFM++          D   + E+ +     
Sbjct: 520 RDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGN---DIRYIPERVEA---- 572

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
               A      I+  ++ +  +LD +L        +   D  E  L     L+    +I+
Sbjct: 573 ----ARNFANKIWNASRFVMMNLDRELM-------DKYKDCKEYSLADKWILSRMNSLIK 621

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGH----WSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             T   E      Y   +A    H      +           +  ++ K       + + 
Sbjct: 622 EVTENME-----KYELGIALQKVHDFLWTEFCDYYIELVKPVLYGDDEKAKG---VVFNV 673

Query: 566 VASIINSGLNII 577
           + +++N+GL ++
Sbjct: 674 LYTVLNTGLKLL 685


>gi|110801210|ref|YP_696599.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675857|gb|ABG84844.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 880

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    +P    + L S       +   +        I     N TG +H+GH     + 
Sbjct: 5   NISTTYNPKEFEERLYSNWQEKKYFTPVIDKSKKPYTIIMPPPNITGKLHLGHALDNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY               +  +++   + +  L      L EG Y      
Sbjct: 65  DMLIRFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLYK----- 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                              E +L  V ++      + IR+ LK +    D          
Sbjct: 107 --------------KEMGREAFLEKVWEW-TDEYRERIREQLKKMGCSADFTREAFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
                +R +   L ++G +Y+G
Sbjct: 152 NLSKAVRHVFVKLYKEGLIYQG 173



 Score = 36.8 bits (84), Expect = 9.7,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ +    V+DE G+D++RFM++          D   + E+ +     
Sbjct: 520 RDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGN---DIRYIPERVEA---- 572

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
               A      I+  ++ +  +LD +L        +   D  E  L     L+    +I+
Sbjct: 573 ----ARNFANKIWNASRFVMMNLDRELM-------DKYKDCKEYSLADKWILSRMNSLIK 621

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGH----WSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
             T   E      Y   +A    H      +           +  ++ K       + + 
Sbjct: 622 EVTENME-----KYELGIALQKVHDFLWTEFCDYYIELVKPVLYGDDEKAKG---VVFNV 673

Query: 566 VASIINSGLNII 577
           + +++N+GL ++
Sbjct: 674 LYTVLNTGLKLL 685


>gi|302190609|ref|ZP_07266863.1| glutamyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 499

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D     G   G Y +   K++ +KY  +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y+    ++  R++ +A+ I         ++       I+        +G      +
Sbjct: 106 AYYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A +    +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|283769125|ref|ZP_06342030.1| valine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104311|gb|EFC05689.1| valine--tRNA ligase [Bulleidia extructa W1219]
          Length = 871

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 70/229 (30%), Gaps = 43/229 (18%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
             +  +  G     +   +   + I     N TG +H+GH     + D +A      GY+
Sbjct: 18  CYNQWLKKGYFTAGDKHKEPFTIVI--PPPNVTGILHIGHAFDTTIQDMIARYKRMQGYD 75

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V   Y        ++   ++   + +  L             G+    +G+E        
Sbjct: 76  VL--YLPG-----MDHAGIATQAKVEARLKK----------QGLNRYDLGRE-------- 110

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
              F E  W         +     IR     L +  D          G    +R +   L
Sbjct: 111 --KFLERAWA------WKEEYAATIRSQWAKLGLSLDYTRERFTMDEGLNEAVRKVFVQL 162

Query: 281 ARQGYVYEG---ILPPPKSKTT-----QKCDMDRKQLLFRSTMVGDDVD 321
             +G +Y G   I   P++KT           D  ++ + S  V D  D
Sbjct: 163 YHEGLIYRGKRIINWDPQAKTALSNIEVVYQDDPGKMFYFSYDVKDSQD 211



 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 11/86 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+   A   + +    +V+L  L+   RD    KMSK  G+
Sbjct: 480 TGYD-IIFFW-------VARMAFQARHFTGQAPFKDVVLHGLI---RDAKGRKMSKSLGN 528

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS 432
            I    V+D+ G D++R+ +      
Sbjct: 529 GIDPMEVIDQYGVDALRYFLTTNSTP 554


>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 803

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 417 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 471

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 472 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 531

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 532 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 571

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 572 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 628

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 629 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 678

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 679 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 725

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 726 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 756


>gi|323141827|ref|ZP_08076692.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413698|gb|EFY04552.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 929

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 105/321 (32%), Gaps = 53/321 (16%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFI----SEDDFHRGD 269
              L +  + +W+P      +  M+    D      +   +   +F      E   +   
Sbjct: 429 DEALKSIDDVQWIPSWGQQRIHNMVSDRHDWCISRQRVWGVPIPVFYCDNCGEHLINEAT 488

Query: 270 PSPIRDIIDNL--------ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              + +  +            +  + EG + P         + D   + F S        
Sbjct: 489 IDSVANWFEKEGSDAWWAHTAEELLPEGTVCPKCGGKHFHKESDIMDVWFDS-------- 540

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQ 380
                  GS       +A    + E  +   +Y+ GSD   G+ +     + AV+ +   
Sbjct: 541 -------GSSH-----MAVAAKRPELSWPVAMYLEGSDQHRGWFQSSLLTSVAVAGRAPY 588

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
            +VL    V    DG   KMSK  G+ I  + V+ + G+D +R           +     
Sbjct: 589 ESVLTHGYVV---DGDGRKMSKSVGNVIVPQDVIKQYGADIIRLWTASSDYKADIRISPK 645

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            +K+ ++          Y + R+  R       D +++    + +P     +  +  L+ 
Sbjct: 646 ILKQLAE---------VYRKIRNTIRYILGNTNDFNYE---TDAVPFNEMLELDQWALM- 692

Query: 501 HLAEYPRVIENATIAQEPYKL 521
           HL    + +  A  + + + L
Sbjct: 693 HLQLLKKEVTAAYESYDFHVL 713


>gi|238917219|ref|YP_002930736.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872579|gb|ACR72289.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 920

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   L    +    +   +        I     N TG +H+GH     + D +   
Sbjct: 47  NPSEIEDRLYHKWLEKKYFHAEVNRDKKPFTIVMPPPNITGKLHMGHALDNTMQDIIIRF 106

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE              +  ++S   +   AL     D  E    G   +    E 
Sbjct: 107 KRMQGYEAL-------WIPGTDHASISTEVKVTNALKEEGIDKHELGREGFLKRT--WEW 157

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y   + +                         LK +    D          G    +
Sbjct: 158 KKEYGGTITSQ------------------------LKKIGSSCDWDRERFTMDEGCSKAV 193

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 194 QEVFIKLYEKGLIYKG 209


>gi|332653566|ref|ZP_08419311.1| valine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518712|gb|EGJ48315.1| valine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 876

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 33/186 (17%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
           +   +G   G     +     +     N TG +H+GH     + D L       GY    
Sbjct: 21  TWEKNGCFKGHRDPERKPFTIV-MPPPNVTGQLHMGHAMDCALQDILIRFKRMEGYAAL- 78

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
                     ++   ++   + ++                        EL  K      +
Sbjct: 79  ------WVPGMDHAGIATQIKVEE------------------------ELRTKEGLTRYD 108

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
              EK+L  V D+  +   +I++   K + +  D   +      G    +R++  +L  +
Sbjct: 109 LGREKFLERVWDWKHKYGDRIVKQQ-KKMGVSCDWDRARFTMDEGCSKAVREVFCSLYEK 167

Query: 284 GYVYEG 289
           G +Y+G
Sbjct: 168 GLIYKG 173


>gi|301051825|ref|YP_003790036.1| glutamyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300373994|gb|ADK02898.1| glutamyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 485

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 50

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 51  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 96

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+        +     +G +    
Sbjct: 97  EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEAQVKAFEAEGRIPSIR 156

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 157 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 210

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 211 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 263

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 264 IEQYKELGY 272


>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 805

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|323339418|ref|ZP_08079701.1| glutamate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093183|gb|EFZ35772.1| glutamate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 496

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 100/309 (32%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R    +   
Sbjct: 1   MAKDKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTFVLRIEDTDTKR-NIADGER 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D     G Y     K + + L  +   + L +       
Sbjct: 59  SQMENL----HWLGIDWDEGPDKPGEYGPYRQSERKGIYQPLIQELLDKDLAYE------ 108

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +  +  +   R+  KA          E ++       I+   D    +G      +
Sbjct: 109 ---SFMTEDELNEQREAQKARGEAPRY---EYEYEGMTKEEIKAKQDEARAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK+   +  D+ +  + F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 RVPKNVVYEWDDIVKGHVSFNSDTIGGDF--VIQKRDGMPTYNFAVV------VDDHMMK 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +  AV  A   +      +   +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLAVYQAFGWEAP----VFGHMSLIINTETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                 +G 
Sbjct: 271 IEQYRSLGY 279


>gi|238018913|ref|ZP_04599339.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748]
 gi|237864397|gb|EEP65687.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748]
          Length = 885

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWSRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  + +
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEEN 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVVVATTRPETMFGDVAVAVNPDDDRYKDLI 246



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+D+ G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P   +   ++  ++     Y   +++ T   
Sbjct: 598 SFVPTADDLTLADQWIVQK---YNETVQSVTSNL 628


>gi|269798312|ref|YP_003312212.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094941|gb|ACZ24932.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 885

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWTRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  + +
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEDN 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVVVATTRPETMFGDVAVAVNPDDDRYKDLI 246



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+D+ G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P   +   ++  ++     Y   +++ T   
Sbjct: 598 SFVPTADDLTLADQWIVQK---YNETVQSVTSNL 628


>gi|32474919|ref|NP_867913.1| glutamyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32445459|emb|CAD75460.1| glutamyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 545

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 113/319 (35%), Gaps = 40/319 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        DAG  ++     +   ++  
Sbjct: 37  APSPTGYLHIGGVRTALFNWLLA---KQAGGQFILRIDDTDAGRNVDAALKPILDGFRWL 93

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +    +     + +LL           +D++    ++ +R++
Sbjct: 94  GMDWDEGPDVGGPHGPYFQSERGDQYRAAAEKLLADG-----HAYRDFAKPEELQTLREE 148

Query: 249 LKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +      +    +++ED+             +   RQG V    L  P+       D+ 
Sbjct: 149 AQKGGEAFVYDRRWMAEDE-------ATAAKFEAEGRQGVVR---LKMPREGQCVIQDLI 198

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R +++        + D  + ++DGS  Y    LA     +E    ++  V  ++H     
Sbjct: 199 RGEVVV---EWASEQDHVIARADGSPLYH---LASVVDDHELKITHV--VRAAEHLPNTA 250

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA-GDFITLRHVV------DEVG 418
           R   +A ++  +      +   L  +   G   K+SKR    +   R         +++ 
Sbjct: 251 RQVFIAQSLGYELP----IYAHLPYVAEPGGSAKLSKRKLDKYKKNRDFAVLLAHGEKIA 306

Query: 419 SDSVRFMMLWRKNSELLDF 437
                 +     N  L+DF
Sbjct: 307 ERCNMQVDADTFNPVLVDF 325


>gi|325913105|ref|ZP_08175475.1| glutamate--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477526|gb|EGC80668.1| glutamate--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 499

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MAKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D     G   G Y +   K++ +KY  +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y+    ++  R++ +A+ I         ++       I+        +G      +
Sbjct: 106 AYYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A +    +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|302871712|ref|YP_003840348.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574571|gb|ADL42362.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 874

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYKMWLDKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ + +E 
Sbjct: 66  KRMQGY---------------------------CALWLPGTDHASIATEAKIVEKMKEEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I + LK L    D          G  + +
Sbjct: 99  LTKEMIGREKFLERAW------EWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 32/186 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLKYFYPTDVLVTAYD-IIFFWVAR------MIFSALEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    V+++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    +  P ES+F  +E  +   L+    +I  
Sbjct: 572 ---------ANKIWNAARFVLMNLDID---TSFKPDESKFTFTERWI---LSRLDTLISE 616

Query: 512 ATIAQE 517
            T   E
Sbjct: 617 VTENLE 622


>gi|312880132|ref|ZP_07739932.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783423|gb|EFQ23821.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 888

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +        +I     N TG +H+GH     + D +   
Sbjct: 13  DPAPIEDRWYEEWLRQGLFHADPASPKPPFSIVIPPPNVTGSLHMGHALNNTLQDAICRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV                           L+   +D        V  + +  + 
Sbjct: 73  KRMKGFEV---------------------------LWLPGTDHAGIATQNVVERSLATQG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++     +   E ++  V ++  Q   +II   LK L    D          G    +
Sbjct: 106 VSRH-----DLGREAFVEKVWEWKEQYGSRIISQ-LKKLGASCDWDRERFTMDEGLSQAV 159

Query: 274 RDIIDNLARQGYVYEGIL 291
           R +   L R+  +Y G  
Sbjct: 160 RQVFVELYRKDLIYRGKY 177


>gi|300859016|ref|YP_003783999.1| valyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686470|gb|ADK29392.1| valyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331268|gb|ADL21462.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 918

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    + L    V    +  N        +I     N TG +H+GH     + D++A  
Sbjct: 29  DPQAHEQELYQSWVDAGYFTANPSSSKPPFSIVLPPPNVTGQLHMGHALDHTLMDSIARR 88

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   +                        V   L
Sbjct: 89  KRMQGFEVL-------WLPGMDHAGIATQTK------------------------VEAML 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K      ++  E+++  V D+  +     I   ++A+    D          G    +
Sbjct: 118 KEKEGKSRWDYDREEFIGHVWDWKNEYG-GTIGKQMRAIGDSVDWSRERFTLDEGLSRAV 176

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   +  +G +Y+       S   +    D
Sbjct: 177 QTIFKQMYDRGMIYQANRLVNWSPVLETAVSD 208


>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 913

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|288574913|ref|ZP_06393270.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570654|gb|EFC92211.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 887

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 96/355 (27%), Gaps = 65/355 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        +    +  ++  +    +I     N TG +H+GH       D +   
Sbjct: 13  DPKPIEDRFYRWWLDKGLFEADVDKEKEAFSIVIPPPNVTGSLHMGHAFNNTFQDIICRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY V                           L+   +D        V  + + KE 
Sbjct: 73  KRMRGYNV---------------------------LWLPGTDHAGIATQNVVERELAKEG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++     +F +  W    K+     ++       K L    D          G    +
Sbjct: 106 ISRHDMSREDFIDRVW--AWKEEYGNRIINQQ----KKLGNSCDWRRLRFTMDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG---- 329
           R +   L  +G +Y G          Q    D +            V  P++   G    
Sbjct: 160 RAVFVRLYEKGLIYRGKYIINWCPRCQTALSDLEVEHSEEPGKLYYVAYPIVGEGGHILV 219

Query: 330 ---SYTYFAADLAYFKCKYERGFDNMI-------------------YVMGSD-HSGYVKR 366
                     D+A      +    ++I                    ++  +  +G+VK 
Sbjct: 220 ATTRPETILGDVAVAVHPRDENNRSLIGKKVVAPLTGGREIPIIEDNMVDPEFGTGFVKI 279

Query: 367 LEAV---AAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
             A       V ++    Q+ V+  + V     G  + MS   G    +  + ++
Sbjct: 280 TPAHDPNDFLVGQRHGLEQLQVIDAQGVMNENAGPYVGMSVEEGRKKAVSDLEEQ 334


>gi|312622286|ref|YP_004023899.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202753|gb|ADQ46080.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 874

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYKMWLDKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++++ +E 
Sbjct: 66  KRMQGY---------------------------CALWLPGTDHASIATEAKIVENMKEEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I + LK L    D          G  + +
Sbjct: 99  LTKEMIGREKFLERAW------EWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168



 Score = 38.4 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 90/253 (35%), Gaps = 49/253 (19%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLKYFYPTDVLVTAYD-IIFFWVAR------MIFSGLEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    V+++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    +  P ES+F  +E  +   L+    +I  
Sbjct: 572 ---------ANKIWNAARFVIMNLDID---TSFKPDESKFTFTERWI---LSRLDTLISE 616

Query: 512 ATIAQE-------PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            T   E         KL  +++D    F   +    +         NN+++       V 
Sbjct: 617 VTENLEKFEIGIAAQKLYDFIWD---EFCDWYIEMSKPILYNKEAENNKEVQY-----VL 668

Query: 565 AVASIINSGLNII 577
               ++ + L ++
Sbjct: 669 LT--VLTNVLKLL 679


>gi|304438334|ref|ZP_07398275.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368700|gb|EFM22384.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 887

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 61/203 (30%), Gaps = 35/203 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P    +           +        T  ++     N TG +H+GH     + 
Sbjct: 8   NIPKTYDPQSFERKWYDYWEQHKLFHDEADESRTPYSVVIPPPNVTGQLHMGHALDNTLQ 67

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L                                  YQ+    N   +P   + G+  +
Sbjct: 68  DILVR--------------------------------YQRMRGKNVVWIPGCDHAGIATQ 95

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              +    +  +   +   EK+L  V D+  Q   +I+   L+ L    D          
Sbjct: 96  AKVEAALREEGTTRFDLGREKFLTRVWDWKQQYGDRIMYQ-LRMLGASCDWDRERFTMDE 154

Query: 268 GDPSPIRDIIDNLARQGYVYEGI 290
           G    +R++  +L  QG +Y+G 
Sbjct: 155 GCSRAVREVFVSLYEQGLIYQGT 177



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 74/223 (33%), Gaps = 43/223 (19%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E WL  ++D+ +   +         +   H     E    R D +               
Sbjct: 397 ENWLENIRDWCISRQLWWG----HRIPAWHCAHCGETSVSRDDLTA-------------- 438

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKY 345
                 P    T    D D     F S +   + +  P    D  + Y  + L       
Sbjct: 439 -----CPHCGSTDLHQDEDVLDTWFSSALWPFETLGWPEQTVDLRHFYPTSVLVT----- 488

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             G+D +I+         V R+  +           +V +  LV   RD    KMSK  G
Sbjct: 489 --GYD-IIFFW-------VARMVMMGLRFGGDVPFRDVFIHGLV---RDSEGRKMSKSLG 535

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           + I    V+++ G+D++RFM++        + F + +V+    
Sbjct: 536 NGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN 578


>gi|302206715|gb|ADL11057.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
          Length = 911

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    + L    V    +  N        +I     N TG +H+GH     + D++A  
Sbjct: 22  DPQAHEQELYQSWVDAGYFTANPSSSKPPFSIVLPPPNVTGQLHMGHALDHTLMDSIARR 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++   +                        V   L
Sbjct: 82  KRMQGFEVL-------WLPGMDHAGIATQTK------------------------VEAML 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K      ++  E+++  V D+  +     I   ++A+    D          G    +
Sbjct: 111 KEKEGKSRWDYDREEFIGHVWDWKNEYG-GTIGKQMRAIGDSVDWSRERFTLDEGLSRAV 169

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   +  +G +Y+       S   +    D
Sbjct: 170 QTIFKQMYDRGMIYQANRLVNWSPVLETAVSD 201


>gi|15644561|ref|NP_229614.1| valyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|148270232|ref|YP_001244692.1| valyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281412433|ref|YP_003346512.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|12585357|sp|Q9X2D7|SYV_THEMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4982399|gb|AAD36880.1|AE001819_3 valyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|147735776|gb|ABQ47116.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281373536|gb|ADA67098.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 865

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 62/216 (28%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +             +    +  G K +I     N TG +H+GH     + D + 
Sbjct: 7   RYNPAEIETKWYRYWEEKGYFTPKGV--GEKFSIVIPPPNITGRIHMGHALNITLQDIVV 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                    V W              E +        V K
Sbjct: 65  RYKRMKGYD--------------------VLWVPG-----------EDHAGIATQNAVEK 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L             EK+L I  +++     + IR+ +KAL    D          G   
Sbjct: 94  FLLQTQGKTREEIGREKFLEITWEWA-NKYRREIREQIKALGASVDWTRERFTLDEGLSR 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L R+G +Y G          +    D +
Sbjct: 153 AVRKVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEE 188



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 42/241 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +       K   +V + +LV   RD    K
Sbjct: 475 YPTDLLVTGFD-IIFFW-------VARMIMMGYEFMNDKPFSHVYIHQLV---RDKYGRK 523

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V+DE G+D +RF  L    ++  D             P ++  Y   
Sbjct: 524 MSKSLGNGIDPLEVIDEYGADPMRFT-LAILAAQGRDIKLD---------PRYFDAY--- 570

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             +    +  +    +  +L     +P E+     +  ++  L +    + NA    +  
Sbjct: 571 --KKFANKIWNATRFVLMNLEDYKEVPLENLKTVDKW-ILTRLNKTVEEVTNALENYDFN 627

Query: 520 KLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             A       ++++  W              ++   R L      LV     ++++ L +
Sbjct: 628 IAAR------TIYNFFWDDFCDWYIEASKPRLKTEERNLVQT--VLVK----VLDASLRL 675

Query: 577 I 577
           +
Sbjct: 676 L 676


>gi|313625533|gb|EFR95248.1| methionyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 655

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 913

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|332523501|ref|ZP_08399753.1| glutamate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314765|gb|EGJ27750.1| glutamate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 481

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 95/284 (33%), Gaps = 25/284 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G          D    +            + 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYAR---HHGGTFIIRIEDTDRKRHVAD-GERSQLENLKW 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  +  + PE +    Y +    EL  KY   LL           K Y  +  +   R+ 
Sbjct: 66  LGIDWDESPETH--ANYRQSERLELYQKYIDLLLEKGL-----AYKSYVTEEELAKERER 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   +   +I+E      +   +  I D    QG +    L   +S   +  DM +  
Sbjct: 119 QEAAG-ETPRYINEF-IGMSEEEKLAYIADR-EAQGIIPTVRLKVNESGIYKWTDMVKGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F    +G   D  + K DG  TY   + A     ++    ++I   G DH     +  
Sbjct: 176 IEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GDDHIANTPKQL 228

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V  A+  +      +   +  +       K+SKR  D +    
Sbjct: 229 MVYEALGWEAP----VFGHMTLIINSETGKKLSKRDTDTLQFIE 268


>gi|312127460|ref|YP_003992334.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777479|gb|ADQ06965.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 874

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 53/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYKMWLDKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +  + +   +  L +             E 
Sbjct: 66  KRMQGYCTL-------WLPGTDHASIATEAKIVEKMK--EEGLTKEMIGREKFLERAWEW 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
              Y                           I + LK L    D          G  + +
Sbjct: 117 KRVYGGR------------------------IIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168


>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|222529480|ref|YP_002573362.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456327|gb|ACM60589.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 874

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYKMWLDKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ + +E 
Sbjct: 66  KRMQGY---------------------------CALWLPGTDHASIATEAKIVEKMKEEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I + LK L    D          G  + +
Sbjct: 99  LTKEMIGREKFLERAW------EWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168



 Score = 38.4 bits (88), Expect = 4.0,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 90/253 (35%), Gaps = 49/253 (19%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLKYFYPTDVLVTAYD-IIFFWVAR------MIFSGLEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    V+++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    +  P ES+F  +E  +   L+    +I  
Sbjct: 572 ---------ANKIWNAARFVIMNLDID---TSFKPDESKFTFTERWI---LSRLDTLISE 616

Query: 512 ATIAQE-------PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            T   E         KL  +++D    F   +    +         NN+++       V 
Sbjct: 617 VTENLEKFEIGIAAQKLYDFIWD---EFCDWYIEMSKPILYNKEAENNKEVQY-----VL 668

Query: 565 AVASIINSGLNII 577
               ++ + L ++
Sbjct: 669 LT--VLTNVLKLL 679


>gi|218533035|ref|YP_002423851.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218525338|gb|ACK85923.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 906

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 68/243 (27%), Gaps = 34/243 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +S+    G  +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFDPAAVEARVSAAWEEGQAFRAGRPERAGAEPFSIVIPPPNVTGSLHMGHALNNTIQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 65  LVRFERMRGKDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L +           E++L  V  +  ++   II   LK L    D          G 
Sbjct: 94  ERKLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQ-LKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +     +L  QG +Y            Q    D +             D P++   G
Sbjct: 153 SRAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPVVDEAG 212

Query: 330 SYT 332
           + T
Sbjct: 213 TPT 215



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 36/199 (18%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +WL  ++ + V   +          + +  IF++E +          D +     +    
Sbjct: 413 QWLENIEPWCVSRQLWWGHQIPVWYDAEGGIFVTESE---------ADAVAQAKAK---- 459

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
            G                   L   ST+   D    L +   + T               
Sbjct: 460 HGREVALTRDPDVLDTWFSSALWPFSTLGWPDKTPELARFYPTNTLVTGK---------- 509

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              ++I+         V R+  +   ++++     V L  LV   RD    KMSK  G+ 
Sbjct: 510 ---DIIFFW-------VARMMMMGLHLTDQAPFETVYLHTLV---RDEKGAKMSKSKGNV 556

Query: 408 ITLRHVVDEVGSDSVRFMM 426
           +    ++D  G+D++RF +
Sbjct: 557 VDPVDLIDRFGADALRFTL 575


>gi|312793668|ref|YP_004026591.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180808|gb|ADQ40978.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 874

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 53/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYKMWLDKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +  + +   +  L +             E 
Sbjct: 66  KRMQGYCTL-------WLPGTDHASIATEAKIVEKMK--EEGLTKEMIGREKFLERAWEW 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
              Y                           I + LK L    D          G  + +
Sbjct: 117 KRVYGGR------------------------IIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168



 Score = 38.0 bits (87), Expect = 4.7,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 32/186 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLKYFYPTDVLVTAYD-IIFFWVAR------MIFSGLEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    V+++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    +  P ES+F  +E  +   L+    +I  
Sbjct: 572 ---------ANKIWNAARFVLMNLDID---TSFKPDESKFTFTERWI---LSRLDTLIRE 616

Query: 512 ATIAQE 517
            T   E
Sbjct: 617 VTENLE 622


>gi|257066998|ref|YP_003153254.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798878|gb|ACV29533.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 648

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 64/408 (15%), Positives = 136/408 (33%), Gaps = 62/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+G+   +V+ D L       G++       ++ G +I   AL      Q+ +  
Sbjct: 16  PNSNLHIGNTYTSVIADVLKRYKNLKGFDAYLTTGTDEHGQKIMRTALDAGTSPQKFVDI 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +  E             +  +      +   E++    V +   +   K  I + + 
Sbjct: 76  IAEETKEL-----------WKKLEIDYDTFIRSTEDQHEKDVAEIFTKLYEKGDIYKGEY 124

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           K       + F +E     G        ++    + Y +       + K   K   +  +
Sbjct: 125 KGYYCTPCETFWTESQLEDGHCPDCGREVEYQEEETYFFRLSKYTDRLKELFKEHPEFLE 184

Query: 309 LLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVM----- 356
             FR   M+ + +D+ L           +DL+  +  ++ G D      +++YV      
Sbjct: 185 PQFRQKEMLNNFIDKGL-----------SDLSVTRNSFDWGVDVPFDNEHVVYVWIDALS 233

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG------------- 395
                   G D + + +   A    + +   + + ++   + +  D              
Sbjct: 234 CYLSAIGYGDDKAKFERYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWIL 293

Query: 396 -MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    +VD  G D+++F ML   N     +F   K  E+   + V  
Sbjct: 294 FDNDKMSKSKGNIMYPEPLVDLYGVDALKFYMLREFNFGSDGNFSARKYMERYNSDLVND 353

Query: 454 VQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           +    +R  S+  +    ++      D F   +I    E  T   +L+
Sbjct: 354 LGNLVSRTTSMIAKYNGGEVRKGTVSDSFDDELITLAEETYTKFNKLM 401


>gi|311086676|gb|ADP66757.1| valyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 910

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 79/274 (28%), Gaps = 47/274 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P ++ + L         +  N + K T   +     N TG +H+GH     + D L   
Sbjct: 6   NPKHIEESLYFFWEKNGFFKPNHLEKSTFCIM-MPPPNITGSLHMGHAFQQTIMDILIRY 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     L                               V +++
Sbjct: 65  HRMQGKNTFWQVGTDHAGIATQIL-------------------------------VERQI 93

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K      ++  + ++  + ++  Q+   II   ++ L I  D    +        + +
Sbjct: 94  FEKEQKTKKDYSRDDFIKKIWEWKKQS-SNIITKQMRRLGISVDWDYEKFTLDPDISNSV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLF------RSTMVGDD 319
           R+    L +   +Y+           +    D        + +  F       + M    
Sbjct: 153 REAFIILYKNNLIYQKKKLVHWDSKLETVISDLEVEHRLIKGKKWFIRYPIIENDMSLRS 212

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             + L+ S         D A      +  ++  I
Sbjct: 213 KVKYLIVSTTRPETLLGDTAIAVNPEDYKYNQFI 246


>gi|114327597|ref|YP_744754.1| valyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327431|sp|Q0BTM1|SYV_GRABC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|114315771|gb|ABI61831.1| valyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 896

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 62/218 (28%), Gaps = 34/218 (15%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N     +   + + +    G  +  N     T   I     N TG +H+GH     + D+
Sbjct: 10  NF--DHAANEQRIYAGWEHGGAFAANPASSATPFTIMIPPPNVTGSLHMGHALTFTLQDS 67

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +   +                            
Sbjct: 68  LVRWRRMQGRDVLWQPGTDHAGIATQMVVERL---------------------------- 99

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
              LA + S        + +L  V  +  ++   I    L+ L    D          G 
Sbjct: 100 ---LASEGSPGRREIGRDAFLDRVWRWKAESGGNITHQ-LRRLGASLDWGRERFTMDEGL 155

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + +RD+   L RQG +Y            Q    D +
Sbjct: 156 SAAVRDVFVTLYRQGLIYRDRRLVNWDPQLQTAISDLE 193


>gi|84490249|ref|YP_448481.1| isoleucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373568|gb|ABC57838.1| IleS [Methanosphaera stadtmanae DSM 3091]
          Length = 1055

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 82/219 (37%), Gaps = 23/219 (10%)

Query: 357 GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D   G+   +L    AA    KA    +L     L  DG   KMSK  G+ ++   V+
Sbjct: 562 GHDQTRGWFYSQLGLGVAAFG--KAPYKKVLMHGFTLDEDGK--KMSKSLGNVVSPEEVI 617

Query: 415 DEVGSDSVRFMML-WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++ G+D +RF +L   K  + L F + +V+  SK   + +  Y +A              
Sbjct: 618 EKYGADVLRFYLLDANKPWDDLKFHWDEVQNSSKLFNILWNVYYFATTYMSLDNFNPTKH 677

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           + D  +F    +  ES  +     LI  +      IE+    +   K+  ++ +      
Sbjct: 678 NRDDLIFREEDLWIESRIN----SLIKSVG---EDIESLVFNRATEKITDFILE---DLS 727

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             +   R      +V++++         L +     + +
Sbjct: 728 RWY--VRLIRGRTWVESDDPDKLGAYYTLYY----TLKN 760


>gi|242372745|ref|ZP_04818319.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349518|gb|EES41119.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 484

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W       + D D   G Y       +   L  +   E   +   K     ++   +
Sbjct: 64  --KWLGLDWDESIDKDKGYGPYRQSERADIYNPLIQQLLDEDKAY---KCYMTEEELEEE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +I R ++     QH     E           R   +   R+  +       PK KT 
Sbjct: 119 REGQIARGEMPRYGGQHAHLTEEQ----------RQQFEAEGRKPSIR---FRVPKDKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G 
Sbjct: 166 TFNDMVKGEISFDSNNIGDW---VIVKKDGVPTYN------FAVAVDDHYMKISDVIRGD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEPPRFGHM-----ALIVNEERKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|294792176|ref|ZP_06757324.1| valine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457406|gb|EFG25768.1| valine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 885

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWTRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  + +
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEDN 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVVVATTRPETMFGDVAVAVNPDDDRYKDLI 246



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+D+ G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P   +   ++  ++     Y   +++ T   
Sbjct: 598 SFVPTADDLTLADQWIVQK---YNETVQSVTSNL 628


>gi|163854090|ref|YP_001642133.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665695|gb|ABY33062.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 906

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 68/243 (27%), Gaps = 34/243 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +S+    G  +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFDPAAVEARVSAAWEEGQAFRAGRPERAGAEPFSIVIPPPNVTGSLHMGHALNNTIQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 65  LVRFERMRGKDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L +           E++L  V  +  ++   II   LK L    D          G 
Sbjct: 94  ERKLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQ-LKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +     +L  QG +Y            Q    D +             D P++   G
Sbjct: 153 SRAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPVVDEAG 212

Query: 330 SYT 332
           + T
Sbjct: 213 TPT 215



 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +   ++++     V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 515 WVARMMMMGLHLTDQAPFETVYLHTLV---RDEKGAKMSKSKGNVVDPVDLIDRFGADAL 571

Query: 423 RFMM 426
           RF +
Sbjct: 572 RFTL 575


>gi|325568422|ref|ZP_08144789.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158191|gb|EGC70344.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 668

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 119/351 (33%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEKKAEEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   ++   L+   +K++    DY   A+ KI +  L  
Sbjct: 66  -------GVDPQEYVDKMAADVKKLWN--TLDISYDKFIRTTDDYHKTAVQKIFQQLLDQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   +++ + S  D      + + ++  +   +      ++        +   +    
Sbjct: 117 GDIYLGEYEGWYSVSDEEYFTETQLAEVYRDEEGK------VIGGKAPSGHEVELVKESS 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             FR +      DR +   D    +                    DLA  +  ++ G   
Sbjct: 171 YFFRMSKY---ADRLVQYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPV 227

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
               ++++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 228 TASPEHVVYVWIDALSNYITALGYGSEDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+    D++R+ +L 
Sbjct: 288 ALDLPLPKKIFGHGWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLR 338


>gi|27363971|ref|NP_759499.1| isoleucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81449064|sp|Q8DES7|SYI_VIBVU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27360088|gb|AAO09026.1| isoleucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 32/243 (13%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRP--------LLKSDGSYTYFAADLAYF 341
               K  Q  +    Q  +    + ++GDD  +         +    G   Y   D    
Sbjct: 496 ELIEKVAQVVEQKGIQAWWDIDAAELLGDDAAQYEKVLDTLDVWFDSGVTHYAVVD---- 551

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K +   G +  +Y+ GSD   G+ +     + A+  K     VL    V    DG   KM
Sbjct: 552 KREEFNGAEADMYLEGSDQHRGWFQSSLISSIAMKGKAPYKQVLTHGFVV---DGHGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 659

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L+      +++P E         +   LA    ++  A      + 
Sbjct: 660 IRNTAR---FFLANLNGFNPETDIVPVEEMVALDRWAVGRALAAQNEIV-KAYDEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VTQ 718


>gi|312127589|ref|YP_003992463.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777608|gb|ADQ07094.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 920

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 25/182 (13%)

Query: 354 YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     A A   +     VL    V    DG   KMSK  G+ I+   
Sbjct: 558 YLEGNDQYRGWFQSSLLTAVATKGRAPYRIVLTHGFVV---DGEGKKMSKSEGNVISPFD 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++E G+D +R   +    +  +      +K+ ++          Y + R+  R      
Sbjct: 615 IINEFGADILRLWCVSADYTTDMRISKDIIKQLTEI---------YRKIRNTARFLLGNL 665

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS 530
            D D      + +  E+  +  +  L   L +    +  A           Y  +Y L  
Sbjct: 666 YDFD---PKTDKVGYENLKEIDKWAL-QRLYKLIEKVTKAYEEY------DYNQVYHLVH 715

Query: 531 VF 532
            F
Sbjct: 716 NF 717


>gi|310830112|ref|YP_003962469.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741846|gb|ADO39506.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 648

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 71/471 (15%), Positives = 145/471 (30%), Gaps = 79/471 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  DTL      +GY+       ++ G +I            Q    
Sbjct: 17  PSGDLHIGHTYTTVAADTLTRFKKLTGYDAYFLTGTDEHGQKI------------QKAAE 64

Query: 192 NDSDLPEGYYPGVY--LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRD 247
                P+ Y   V   +K +  +L +    + +   + +    ++    +      I + 
Sbjct: 65  EKGVTPQAYVDDVVGRIKEL-WKLMNINYDQFIRTTDPEHEKTIQQIFKKLYDQGDIYKG 123

Query: 248 DLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGI 290
             +       + F +E     G+                   +    D L +    +   
Sbjct: 124 KYEGWYCTPCESFWTESQLVDGNCPDCGRPVEKASEEAYFFKMSKYADRLLKYIEDHPDF 183

Query: 291 LPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           + P   K            Q   + R    +   +  D      +  D    Y +A L Y
Sbjct: 184 IQPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVTFDPGHVVYVWIDALPNYISA-LGY 242

Query: 341 FKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
              K +   D      ++++G D    + R   +      ++        +      L +
Sbjct: 243 LNDKPQL-MDKYWPANVHLVGKD----IIRFHTIYWPIILMALDLPLPEHVYGHGWILLK 297

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVF 452
            G   KMSK  G+ +    + ++ G D++R+ +L          ++   +      +   
Sbjct: 298 GG---KMSKSVGNVVDPVELAEKYGVDALRYHVLREMTYGADGIYNEDLLVSHINSD--- 351

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               A      + R         D       VIP E E    + +LI    E P V+E+ 
Sbjct: 352 ---LANDLGNLLSRTVAMTVKYFD------GVIPAERESGDFDAELIALAEETPGVVEDY 402

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
               +  +    ++ L S  + +    +      +V   + +    RL +V
Sbjct: 403 MNKLDFSRALEAVWKLVSRTNKYIDETQ-----PWVLIKDPE-KKARLAMV 447


>gi|240117203|ref|ZP_04731265.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268602893|ref|ZP_06137060.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587024|gb|EEZ51700.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 929

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 95/294 (32%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   EG     KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EGWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|19114731|ref|NP_593819.1| mitochondrial valine-tRNA ligase Vas1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74581976|sp|O14160|SYVM_SCHPO RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|4490646|emb|CAB38577.1| mitochondrial valine-tRNA ligase Vas1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 950

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 60/193 (31%), Gaps = 33/193 (17%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              +   +I+   I Y +    +     I     N TG +H+GH     + D LA   A 
Sbjct: 34  AAIQDGWNIIRKHIHYPKPKSIEAPMFPILLPPPNITGKLHIGHALTITIQDALARFYAM 93

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY+V+     + AG        SV  +Y Q               GVY           
Sbjct: 94  HGYKVSFRPGTDHAG----IATQSVVEKYLQK-------------KGVYRNQ-------- 128

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                    +++ L  +  + V+    II   LK+     D         +     + + 
Sbjct: 129 -------LSKDELLSSIHSWQVKYQKSIINQ-LKSFEAIFDWDNIFYTMDQNRSEAVNEA 180

Query: 277 IDNLARQGYVYEG 289
             +L   G +Y  
Sbjct: 181 FISLFNAGLIYRA 193


>gi|37678871|ref|NP_933480.1| isoleucyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|81758302|sp|Q7MNM8|SYI_VIBVY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|37197612|dbj|BAC93451.1| isoleucyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 32/243 (13%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRP--------LLKSDGSYTYFAADLAYF 341
               K  Q  +    Q  +    + ++GDD  +         +    G   Y   D    
Sbjct: 496 ELIEKVAQVVEQKGIQAWWDIDAAELLGDDAAQYEKVLDTLDVWFDSGVTHYAVVD---- 551

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K +   G +  +Y+ GSD   G+ +     + A+  K     VL    V    DG   KM
Sbjct: 552 KREEFNGAEADMYLEGSDQHRGWFQSSLISSIAMKGKAPYKQVLTHGFVV---DGHGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 659

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L+      +++P E         +   LA    ++  A      + 
Sbjct: 660 IRNTAR---FFLANLNGFNPETDIVPVEEMVALDRWAVGRALAAQNEIV-KAYDEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VTQ 718


>gi|189235044|ref|XP_973688.2| PREDICTED: similar to valyl-tRNA synthetase [Tribolium castaneum]
          Length = 1330

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 32/213 (15%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  +Y   ++ S      +Y R         ++     N TG +H+GH   A V D +  
Sbjct: 36  LGDAYKPGVVESEERECCDYFRPKARSSQTFSMILPPPNITGSLHLGHALTATVQDVIVR 95

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G +      I+ AG     +   + W  +                G     +G+E
Sbjct: 96  WKRMEGVDCVWVPGIDHAGIATQVVVEKLLWGEK----------------GQSRHDLGRE 139

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
              ++ + + N+ EEK               +I   L+ L    D               
Sbjct: 140 ---RFQARVWNWKEEKE-------------AVIESQLRRLGACLDWSRKVFTMDPKQSQA 183

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +      L   G +Y        S + Q    D
Sbjct: 184 VAQAFIKLFESGLIYRADHLVNWSCSLQSAISD 216


>gi|325663738|ref|ZP_08152142.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470231|gb|EGC73464.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 643

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 117/388 (30%), Gaps = 57/388 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  +    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 12  MDKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELK 71

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ +    + + E       +  +     DK+      + E++   I K   
Sbjct: 72  AQEAGVTPKEFVDGVAAQVKE-------IADLMNTSYDKFIRTTDEYHEKQVQKIFKKLY 124

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNL 280
            Q    I +   + +     + F +E     G                    +    D L
Sbjct: 125 EQG--DIYKGYYEGMYCTPCEAFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRL 182

Query: 281 ARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                 +   + P   K            Q   + R    +   +  D      +  D  
Sbjct: 183 IEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDAL 242

Query: 331 YTYFAADLAY-------FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQ 380
             Y    + Y        + K +   D  ++++G D    + R   +      ++     
Sbjct: 243 TNYITG-IGYDCDGENSEQFKKDWPAD--LHLIGKD----IIRFHTIYWPIFLMALDLPL 295

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
              +      L  DG   KMSK  G+ I    +V+  G D+VR+ +L            +
Sbjct: 296 PKQVFGHPWLLQGDG---KMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITW 352

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQ 467
             + E+   +    +     R  S+  +
Sbjct: 353 ELMVERMNSDLANTLGNLVNRTISMTNK 380


>gi|297849874|ref|XP_002892818.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338660|gb|EFH69077.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1108

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 68/236 (28%), Gaps = 38/236 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   +       +  +         I     N TG +H+GH   A + DT+   
Sbjct: 141 SPAAVEKSWYAWWEKSDLFKADAKSSKKPFVIVLPPPNVTGALHIGHALTAAIEDTIIRW 200

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +                               V K+L
Sbjct: 201 KRMSGYNALWVPGVDHAGIATQVV-------------------------------VEKKL 229

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E+++  V  +  Q     I   L++L    D               +
Sbjct: 230 MRERGMTRHDVGREEFVKEVWKWKNQYG-GTILTQLRSLGASLDWSRECFTMDEQRSKAV 288

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +    L ++G +Y  I         +    D +          D  +R LLK  G
Sbjct: 289 TEAFVRLYKEGLIYRDIRLVNWDCVLRTAISDEE------VEYIDIKERTLLKVPG 338


>gi|260584970|ref|ZP_05852714.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157400|gb|EEW92472.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 470

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 106/350 (30%), Gaps = 36/350 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  V  DT+     + GY+V    Y+++     + +      +   
Sbjct: 28  CGPTVYNYIHIGNARSTVAFDTIRRYFEYRGYDV---NYVSNFTDVDDKII-----KAAN 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                  ++ + Y    Y       +     +  +    +  +  V+    +        
Sbjct: 80  ETGMTPEEVSKKYIEAFYEDTAALNVKKATLNPTVMNTMDDIIAFVEALVEKEAA----- 134

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             ++    + I     D+ +     I+D+      Q    +       +K     D    
Sbjct: 135 -YESGGDVYFITEKFKDYGKLSDQSIQDL------QVGASQRTESADDAKKRNPLDF--- 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       D P  K    +    + +A       +   + I + G          
Sbjct: 185 ALWKSAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGDTIDIHGGGQDLAFPHH 238

Query: 368 EAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           E   A    K         +    V +  DG   KMSK  G+F+ +  ++ E+    +RF
Sbjct: 239 ENEIAQSESKTGHPFARYWMHNAFVTMGEDGE--KMSKSLGNFVLVHDIIKEIDPQILRF 296

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            +        L F    ++E +    V  +Q  ++  R    QA +   D
Sbjct: 297 FLASAHYRRPLKFSESSLQEATAN--VSKIQTTFSNTRYRLEQAVESLED 344


>gi|229083407|ref|ZP_04215755.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699840|gb|EEL52477.1| Glutamyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 491

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 94/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGEYGP--YRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+      + I     +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEEQIKQFETEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|227824451|ref|ZP_03989283.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904950|gb|EEH90868.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 644

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/328 (16%), Positives = 114/328 (34%), Gaps = 38/328 (11%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---VFW 183
           + SAN    +H+GH  C+ + DT+A     +G++V      ++ G +I   A        
Sbjct: 14  YPSAN----LHIGHAYCSTIADTIARYKRANGFDVRFVTGSDEHGLKIQRKAEENGMTPL 69

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP--IVKDYSVQAM 241
           +Y   +  N   L E    G+      +  + ++   +    +  +    I K   V   
Sbjct: 70  QYVDGIVANFKKLWEML--GISYTDFVRSSSAEHERVVQEILQRVYDKGDIYKKKYVGKY 127

Query: 242 M------KIIRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                     R   +A  +  D       + E+D+          I+ ++       + +
Sbjct: 128 CVPCESFWTDRQIEEAGGVCPDCGRPVETMEEEDYFFRMSKYADQILKHIENHPDFIQPV 187

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK----CKYE 346
               +++         + L    +     +  P  K   +Y +F A L YF      + E
Sbjct: 188 --SRRNEMIAFLKQGLEDLCISRSTFDWGIPVPFDKKQITYVWFDALLCYFTGIGFLRNE 245

Query: 347 RGFDNM----IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
             F+      ++++G +    +     A+  ++  +  +       LV         KMS
Sbjct: 246 EEFNRFWPVDLHLVGKEIVRFHTIIWPAMLLSMGYELPKKVYGHGWLVV-----NGDKMS 300

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +     + E G D+VR+ +L  
Sbjct: 301 KSKGNVVDPVEPIKEFGPDAVRYFLLSE 328


>gi|312135290|ref|YP_004002628.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775341|gb|ADQ04828.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 874

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYRMWLDKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ + +E 
Sbjct: 66  KRMQGY---------------------------CALWLPGTDHASIATEAKIVEKMKEEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I + LK L    D          G  + +
Sbjct: 99  LTKEMIGREKFLERAW------EWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168



 Score = 37.2 bits (85), Expect = 7.7,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 32/186 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLRYFYPTDVLVTAYD-IIFFWVAR------MIFSGLEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    V+++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    +  P ES+F  +E  +   L+    +I  
Sbjct: 572 ---------ANKIWNAARFVLMNLDID---TSFKPDESKFTFTERWI---LSRLDTLISE 616

Query: 512 ATIAQE 517
            T   E
Sbjct: 617 VTENLE 622


>gi|284161481|ref|YP_003400104.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011478|gb|ADB57431.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 1041

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 81/202 (40%), Gaps = 11/202 (5%)

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +S  +A    +L     L   G   KMSK  G+ +    V++EVG D+ R  +L     E
Sbjct: 564 ISFGRAPYKTVLMHGFTLDEQGR--KMSKSLGNVVEPEEVINEVGVDTFRLYVLSSALWE 621

Query: 434 LLDFDFCKVKEQSKENPVF--YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            L F + +V+   +   ++   +++AY    S+ R  + I PD    +F  +      + 
Sbjct: 622 DLRFSWNEVRNVLRMLNIYWNAIRFAYT-YMSLDR--EMITPDKIQQIFGCDFDSALKKI 678

Query: 492 DTSE-LQLIVHLAEYPRVIENATIAQEPYKLAF-YLYDLASVFHGHWSHGRENPRLRFVQ 549
           +  E   ++  L    +V  +A    + +++   +L  +   F   +   +      +V+
Sbjct: 679 EDYENRWILSRLESLNKVAWDAMENYQLHRVVRAFLDFVVEDFSRWY--IQLIRPRVWVE 736

Query: 550 ANNRKLTMMRLQLVHAVASIIN 571
             ++      L L+  +   I 
Sbjct: 737 GEDKLKIATYLTLLRVIEKSIK 758


>gi|254492977|ref|ZP_05106148.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226512017|gb|EEH61362.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 929

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 95/294 (32%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   EG     KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EGWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|331087261|ref|ZP_08336331.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408947|gb|EGG88408.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 632

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 117/388 (30%), Gaps = 57/388 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  +    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MDKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ +    + + E       +  +     DK+      + E++   I K   
Sbjct: 61  AQEAGVTPKEFVDGVAAQVKE-------IADLMNTSYDKFIRTTDEYHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNL 280
            Q    I +   + +     + F +E     G                    +    D L
Sbjct: 114 EQG--DIYKGYYEGMYCTPCEAFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRL 171

Query: 281 ARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                 +   + P   K            Q   + R    +   +  D      +  D  
Sbjct: 172 IEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDAL 231

Query: 331 YTYFAADLAY-------FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQ 380
             Y    + Y        + K +   D  ++++G D    + R   +      ++     
Sbjct: 232 TNYITG-IGYDCDGENSEQFKKDWPAD--LHLIGKD----IIRFHTIYWPIFLMALDLPL 284

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
              +      L  DG   KMSK  G+ I    +V+  G D+VR+ +L            +
Sbjct: 285 PKQVFGHPWLLQGDG---KMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITW 341

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQ 467
             + E+   +    +     R  S+  +
Sbjct: 342 ELMVERMNSDLANTLGNLVNRTISMTNK 369


>gi|309809209|ref|ZP_07703079.1| glutamate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871516|ref|ZP_07731609.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872525|ref|ZP_07732593.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|308170443|gb|EFO72466.1| glutamate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311091887|gb|EFQ50263.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092911|gb|EFQ51262.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 499

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + 
Sbjct: 1   MATEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q+  L     W         D     G   G Y +   K++ +KY  +LL+        
Sbjct: 59  SQMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               Y+    ++  R++ +A+ I         ++       I+        +G      +
Sbjct: 106 AYYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRI 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     
Sbjct: 163 HIPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   V  A +    +       +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 271 IEQYRDLGY 279


>gi|303253010|ref|ZP_07339164.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302648142|gb|EFL78344.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
          Length = 954

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|240114919|ref|ZP_04728981.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600576|ref|ZP_06134743.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584707|gb|EEZ49383.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 929

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 95/294 (32%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   EG     KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EGWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|229552054|ref|ZP_04440779.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229314571|gb|EEN80544.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 901

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 32  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 91

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 92  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 121 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 178

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 179 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 210


>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|15616971|ref|NP_240184.1| valyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219682279|ref|YP_002468663.1| valyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|11134961|sp|P57447|SYV_BUCAI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|25293112|pir||F84972 valine-tRNA ligase (EC 6.1.1.9) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039036|dbj|BAB13070.1| valyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219622012|gb|ACL30168.1| valyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086103|gb|ADP66185.1| valyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311087262|gb|ADP67342.1| valyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
 gi|311087778|gb|ADP67857.1| valyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 955

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 79/274 (28%), Gaps = 47/274 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P ++ + L         +  N + K T   +     N TG +H+GH     + D L   
Sbjct: 6   NPKHIEESLYFFWEKNGFFKPNHLEKSTFCIM-MPPPNITGSLHMGHAFQQTIMDILIRY 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     L                               V +++
Sbjct: 65  HRMQGKNTFWQVGTDHAGIATQIL-------------------------------VERQI 93

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K      ++  + ++  + ++  Q+   II   ++ L I  D    +        + +
Sbjct: 94  FEKEQKTKKDYSRDDFIKKIWEWKKQS-SNIITKQMRRLGISVDWDYEKFTLDPDISNSV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLF------RSTMVGDD 319
           R+    L +   +Y+           +    D        + +  F       + M    
Sbjct: 153 REAFIILYKNNLIYQKKKLVHWDSKLETVISDLEVEHRLIKGKKWFIRYPIIENDMSLRS 212

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             + L+ S         D A      +  ++  I
Sbjct: 213 KVKYLIVSTTRPETLLGDTAIAVNPEDYKYNQFI 246


>gi|323704166|ref|ZP_08115745.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536232|gb|EGB26004.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 927

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 36/219 (16%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A        NVL    V    DG   KMSK  G+ I   
Sbjct: 556 LYLEGSDQHRGWFQSSLLTSVATKGIAPYKNVLTHGFVV---DGEGRKMSKSLGNGIDPA 612

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VV E G+D +R   +    +  +      +K+ ++         +Y + R+  +     
Sbjct: 613 DVVKEYGADILRLWAVSADFTSDMRISKEILKQMTE---------SYRKIRNTAKFLLSN 663

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D D D   ++++P +   D  +  L      Y  ++++ T A +      Y       
Sbjct: 664 LYDFDAD---KDLLPYDELLDIDKWALYK----YNELVKDVTEAFD-----KY------- 704

Query: 532 FHGHWSHGRENPRLRFVQANN--RKLTMMRLQLVHAVAS 568
               +           V  +N    +   RL    A + 
Sbjct: 705 --KFYEFLHLVHTFCIVDMSNLYLDILKDRLYTFPATSK 741


>gi|317132442|ref|YP_004091756.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470421|gb|ADU27025.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 872

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 60/195 (30%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +   +    ++G  +  ++    T   I     N TG +H+GH              
Sbjct: 11  PSAVEDRIYRFWLNGGYFHADIHPDKTPFTIVMPPPNITGKLHMGHA------------- 57

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                         D   Q + L      +  +AL+   +D          +  + KE  
Sbjct: 58  ------------FED--TQQDILIRFKRMQGFEALWLPGTDHASIATEAKIVAAMAKEGL 103

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K  +    F E  W    K+     ++      LK L    D          G  + +R
Sbjct: 104 SKQDTGRDGFLERAW--KWKEEYGGNIVAQ----LKKLGASCDWARERFTMDEGCSTAVR 157

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  QG +Y G
Sbjct: 158 EVFVRLYEQGLIYRG 172


>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|307257571|ref|ZP_07539332.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863919|gb|EFM95841.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 4   RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|294101952|ref|YP_003553810.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616932|gb|ADE57086.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 926

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 119/321 (37%), Gaps = 38/321 (11%)

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
             +    ++ +K    + ++ +++   +V+D S      I R  +  + I    +  E  
Sbjct: 424 KFRQETLDIIEKGVRWIPDWGKDRIYNMVRDRSD---WCISRQRVWGVPIP-AFYCKECG 479

Query: 265 FHRGDPSPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                P  IR +   +  +G  V+  + P        +C     + L + T + D     
Sbjct: 480 ELILKPELIRAVQAKVKEEGSSVWWKLSPEELLGNLAQCPTCGSRHLVKDTNIMD----- 534

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQIN 382
            +  D   ++F+      + + E  +   +Y+ GSD   G+ +     + A+ +K    N
Sbjct: 535 -VWFDSGVSHFSV----LETRPELKWPADMYLEGSDQHRGWFQTSLLTSVAIRKKAPYRN 589

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL    +    DG   KMSK  G+ +  + VVD+ G+D +R  +        +      +
Sbjct: 590 VLTHGFIV---DGEGKKMSKSLGNVVRPQEVVDKYGADILRLWVASTDYRNDIRISEGII 646

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K  ++         +Y R R+  R       D D     ++ +P     +  +      L
Sbjct: 647 KSLTE---------SYRRIRNTARYLLGNLVDFD---PAKDTVPYNELLEIDKW----IL 690

Query: 503 AEYPRVIENA---TIAQEPYK 520
           ++  +V++ A       E + 
Sbjct: 691 SKLNQVVDRATHGFDEYEFHV 711


>gi|238927599|ref|ZP_04659359.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884524|gb|EEQ48162.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 887

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 61/203 (30%), Gaps = 35/203 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P    +           +        T  ++     N TG +H+GH     + 
Sbjct: 8   NIPKTYDPQSFERKWYDYWEQHKLFHDEADESRTPYSVVIPPPNVTGQLHMGHALDNTLQ 67

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L                                  YQ+    N   +P   + G+  +
Sbjct: 68  DILVR--------------------------------YQRMRGKNVVWIPGCDHAGIATQ 95

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
              +    +  +   +   EK+L  V D+  Q   +I+   L+ L    D          
Sbjct: 96  AKVEAALREEGTTRFDLGREKFLTRVWDWKQQYGDRIMYQ-LRMLGASCDWDRERFTMDE 154

Query: 268 GDPSPIRDIIDNLARQGYVYEGI 290
           G    +R++  +L  QG +Y+G 
Sbjct: 155 GCSRAVREVFVSLYEQGLIYQGT 177



 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 74/223 (33%), Gaps = 43/223 (19%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E WL  ++D+ +   +         +   H     E    R D +               
Sbjct: 397 ENWLENIRDWCISRQLWWG----HRIPAWHCAHCGETSVSRDDLTA-------------- 438

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKY 345
                 P    T    D D     F S +   + +  P    D  + Y  + L       
Sbjct: 439 -----CPHCGSTDLHQDEDVLDTWFSSALWPFETLGWPEQTVDLRHFYPTSVLVT----- 488

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             G+D +I+         V R+  +           +V +  LV   RD    KMSK  G
Sbjct: 489 --GYD-IIFFW-------VARMVMMGLRFGGDVPFRDVFIHGLV---RDSEGRKMSKSLG 535

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           + I    V+++ G+D++RFM++        + F + +V+    
Sbjct: 536 NGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN 578


>gi|303229381|ref|ZP_07316171.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515917|gb|EFL57869.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 885

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 80/272 (29%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIESKWYSYWENQGYFHEEVDTDKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V  +  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWKWKKEYGDTIVKQ-IRSLGASCDWSRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  +  
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEEG 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVIVATTRPETMFGDVAVAVNPEDDRYKDLI 246



 Score = 38.4 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 56/154 (36%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+ E G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P E++   ++  ++    +Y   + + T   
Sbjct: 598 SFVPTEADLTLADKWIV---EKYNETVASITANL 628


>gi|298710134|emb|CBJ31846.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1036

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 61/216 (28%), Gaps = 36/216 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LS   + + + +       +      K     +     N TG +H+GH     + D L 
Sbjct: 130 FLS---VERSMYAWWEEKGYFKPGGDPKKKSYVVPMPPPNVTGYLHMGHAMGTTLQDILT 186

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     L                         G+  K +G+
Sbjct: 187 RYHRMRGEPTLFLPGQDHAGIATQMLVERALAAE-----------------GIDRKEIGR 229

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E    +  ++  + E+K   IV+              ++ L    D             +
Sbjct: 230 E---AFLKKVWEWKEDKGGYIVRQ-------------MRRLGASADWSRERFTLDPEMSA 273

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + +    L  +G VY G      S + Q    D +
Sbjct: 274 AVTEAFVRLHEKGLVYRGDYMVNWSPSLQTAVSDLE 309



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           E G+D +I+         V R+  +   ++ K     + L  LV   +DG  +KMSK  G
Sbjct: 614 ETGYD-IIFFW-------VARMVMMGIELTGKSPFDTIYLHGLV---KDGNGMKMSKTKG 662

Query: 406 DFITLRHVVDEVGSDSVRFMMLW 428
           + +     +D  G+D++R+ ++ 
Sbjct: 663 NVVDPIDTMDSYGTDALRYTLVT 685


>gi|312874871|ref|ZP_07734890.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089616|gb|EFQ48041.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 501

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 106/308 (34%), Gaps = 37/308 (12%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
              K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + +
Sbjct: 4   AKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSKS 61

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G   G Y +   K++ +KY  +LL+         
Sbjct: 62  QMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----KA 108

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              Y+    ++  R++ +A+ I         ++       I+        +G      + 
Sbjct: 109 YYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTSDEIKQAQAAAEAKGLKPVVRIH 165

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     +
Sbjct: 166 IPEHRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMEI 217

Query: 353 IYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +V+ G DH     +   V  A +    +       +  +       K+SKR    +   
Sbjct: 218 THVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQFI 273

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 274 EQYRDLGY 281


>gi|307250775|ref|ZP_07532706.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306857187|gb|EFM89312.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   RFDSSAVEQALYKHWEEQGYFKPSENPDVPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|259649574|dbj|BAI41736.1| valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 901

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 32  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 91

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 92  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 121 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 178

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 179 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 210


>gi|320157349|ref|YP_004189728.1| isoleucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932661|gb|ADV87525.1| isoleucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 32/243 (13%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRP--------LLKSDGSYTYFAADLAYF 341
               K  Q  +    Q  +    + ++GDD  +         +    G   Y   D    
Sbjct: 496 ELIEKVAQVVEQKGIQAWWDIDAAELLGDDAAQYEKVLDTLDVWFDSGVTHYAVVD---- 551

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K +   G +  +Y+ GSD   G+ +     + A+  K     VL    V    DG   KM
Sbjct: 552 KREEFNGAEADMYLEGSDQHRGWFQSSLISSIAMKGKAPYKQVLTHGFVV---DGHGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 659

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L+      +++P E         +   LA    ++  A      + 
Sbjct: 660 IRNTAR---FFLANLNGFNPETDIVPVEEMVALDRWAVGRALAAQNEIV-KAYDEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VTQ 718


>gi|126660010|ref|ZP_01731132.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618688|gb|EAZ89435.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 482

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 121/334 (36%), Gaps = 48/334 (14%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           IE G+  +        ++         H+GH R  ++ D +   + + GY VT      D
Sbjct: 19  IEEGKVKMYCCGITVYDYC--------HLGHARTCIIWDVVRRYLQWHGYNVTYIQNFTD 70

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              +I         R ++      S+     Y    ++ +G + AD Y            
Sbjct: 71  IDDKILN-----RARKEKTTMEAVSERFIEAYF-EDMERLGVQKADAYPRATHTLN---- 120

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   +Q ++  +     A     D++ +   F        R  +++L        G
Sbjct: 121 -------GIQRLVSELEAKGYAYASNGDVYYNVHQFKPYGKLSGRK-LEDLQAGA---SG 169

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    S+ ++K D     +  +S   G+   D P  K  G   +     A  + +    
Sbjct: 170 RVNLEDSEASKKKDPADFAVW-KSAKPGEPAWDSPWGK--GRPGWHIECSAMVRERLGET 226

Query: 349 FDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            D  I+V GSD     H   + + EA   A  +  A+   L   +V++       KMSK 
Sbjct: 227 ID--IHVGGSDLIFPHHENEIAQSEA---ATGQPLARYW-LHNGMVKVG----GEKMSKS 276

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
            G+F T+R +++++   +VR  +L     + +DF
Sbjct: 277 LGNFTTIRELLEKIDPMAVRLFILQAHYRKPVDF 310


>gi|307248544|ref|ZP_07530560.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306854939|gb|EFM87126.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 4   RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|307246417|ref|ZP_07528491.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307255402|ref|ZP_07537210.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259852|ref|ZP_07541568.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306852668|gb|EFM84899.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306861631|gb|EFM93617.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866075|gb|EFM97947.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 4   RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|303251669|ref|ZP_07337842.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302649511|gb|EFL79694.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 954

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|270003973|gb|EFA00421.1| hypothetical protein TcasGA2_TC003272 [Tribolium castaneum]
          Length = 968

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 32/213 (15%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  +Y   ++ S      +Y R         ++     N TG +H+GH   A V D +  
Sbjct: 36  LGDAYKPGVVESEERECCDYFRPKARSSQTFSMILPPPNITGSLHLGHALTATVQDVIVR 95

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G +      I+ AG     +   + W  +                G     +G+E
Sbjct: 96  WKRMEGVDCVWVPGIDHAGIATQVVVEKLLWGEK----------------GQSRHDLGRE 139

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
              ++ + + N+ EEK               +I   L+ L    D               
Sbjct: 140 ---RFQARVWNWKEEKE-------------AVIESQLRRLGACLDWSRKVFTMDPKQSQA 183

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +      L   G +Y        S + Q    D
Sbjct: 184 VAQAFIKLFESGLIYRADHLVNWSCSLQSAISD 216


>gi|210617035|ref|ZP_03291370.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
 gi|210149558|gb|EEA80567.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
          Length = 643

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 63/413 (15%), Positives = 126/413 (30%), Gaps = 64/413 (15%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R+      K  +    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +
Sbjct: 9   RSRNMDKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQK 68

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           I   A       ++ +     ++         +  +     DK+     ++ E++   I 
Sbjct: 69  IELKAEEAGVSPKEFVDKVAGEVKA-------IADMMNTSYDKFIRTTDDYHEKQVQKIF 121

Query: 234 KDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDI 276
           K    Q    I +   + +     + F +E     G                    +   
Sbjct: 122 KRLYEQG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAQEEAYFFKMSKY 179

Query: 277 IDNLARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            D L      +   + P   K            Q   + R    +   +  D      + 
Sbjct: 180 ADRLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVW 239

Query: 327 SDGSYTYFAADLAY-------FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSE 376
            D    Y    + Y        + K +   D  ++++G D    + R   +      ++ 
Sbjct: 240 LDALTNYITG-IGYDCDGESTEQFKKDWPAD--LHLIGKD----IIRFHTIYWPIFLMAL 292

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELL 435
                  +      L  DG   KMSK  G+ I    +V+  G D+VR+ +L         
Sbjct: 293 DLPLPKQIFGHPWLLQGDG---KMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDG 349

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
              +  + E+   +    +     R  S+  +        K +  D+D DL  
Sbjct: 350 VITWELMVERMNSDLANTLGNLVNRTVSMTNKYFGGSVTDKGVAGDVDADLKA 402


>gi|70727480|ref|YP_254396.1| glutamyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|118595559|sp|Q4L3I7|SYE_STAHJ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|68448206|dbj|BAE05790.1| glutamyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 484

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 107/301 (35%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +GY  G Y +    ++ +    +LL+  +  K     ++   
Sbjct: 64  ----KWLGLDWDESIDKDKGY--GPYRQSERGDIYNPLIQQLLDEDKAYKCYMTEEELEK 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E+                   +G         P+ +T
Sbjct: 118 EREDQIARGEMPRYGGQHAHLTEEER-------------QQFEAEGRRPSIRFRVPQDQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               DM + ++ F S  +GD     ++K DG  TY   + A     Y  G  ++I   G 
Sbjct: 165 YTFNDMVKGEISFDSNNIGDW---VIVKKDGIPTY---NFAVAIDDYYMGISDVIR--GD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEAPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 129/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL   EE KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I                    +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETISHVANLFRENGSNVWFEREAKDLLPEGFTHPSSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR    +    DF+     V   E    
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFL--LGNLADFNPSQDAVAKAELREV 675

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     + E        YD A+V+H             +    +
Sbjct: 676 DR-----YMLVKLNDLITKVKESYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +     ++R+     L   LV     +
Sbjct: 724 DILYIEAENNHDRRAIQTVLYDVLVALTKLV 754


>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433828|sp|Q819R4|SYI1_BACCR RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782365|sp|B7H6N1|SYI_BACC4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
 gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 483

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 132/409 (32%), Gaps = 104/409 (25%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
              E+      K           N +   H+GH R  +  D +   + + GY+V      
Sbjct: 11  EKEEFKPVEKDKVKMYVCGLTVQNYS---HIGHIRSVINYDVIRRFLEYLGYQV------ 61

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            D  +    +   +  R  +          E   P          LA+KY++  L     
Sbjct: 62  -DYISNFTDINEKIVQRAAE----------EDLKPAA--------LANKYANAFL----- 97

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                              +DL+  N++  D ++   +    + + I +++  L  +GY 
Sbjct: 98  -------------------EDLREFNVKPADKYLRVSE----NVAEIIEMVTTLIEKGYA 134

Query: 287 YE----------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS--------- 327
           YE                K       +M     +  +    + +D  L K          
Sbjct: 135 YEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKEKRNPLDFGLWKKVESETGWDS 194

Query: 328 ---DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKA 379
              +G   +     A    +    FD  I+  G D     H   + + EA +      + 
Sbjct: 195 PWGEGWPGWHIECSAMSMKRLGSTFD--IHGGGVDLIFPHHENEIAQSEAYS-----DQK 247

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            +N  L        +    KMSK  G+F T R V+ E  ++ VR+ +L R     +DF +
Sbjct: 248 FVNYWLHNG---TVNLSGEKMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPIDFSY 304

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            K++E +          +  R ++  R+       LD +    N I QE
Sbjct: 305 EKLEEAAT---------SLTRIKNT-RKQLAKVLSLDINSAAENKIEQE 343


>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 913

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 715

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 716 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 746


>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|254782363|sp|B7IUQ5|SYI_BACC2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|307253150|ref|ZP_07535029.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859363|gb|EFM91397.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 948

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 4   RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 152 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 187


>gi|302683102|ref|XP_003031232.1| hypothetical protein SCHCODRAFT_82414 [Schizophyllum commune H4-8]
 gi|300104924|gb|EFI96329.1| hypothetical protein SCHCODRAFT_82414 [Schizophyllum commune H4-8]
          Length = 1031

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 55/199 (27%), Gaps = 38/199 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +         +   +            +     N TG +H+GH     + D+L   
Sbjct: 79  NPTAVEAAWYDWWEAQGYFKPKEDDGSPTFVMPSPPPNVTGSLHIGHALTTAIQDSLVRW 138

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY        + AG        SV  +    L                        
Sbjct: 139 HRMRGYRTLFVPGFDHAG----ISTQSVVEKRLFKLTGE--------------------- 173

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK++  V ++    M +I    L+ L   +D        +  DP   
Sbjct: 174 ------TRHDLGREKFVEKVGEWKDDYMSRISNQ-LRRLGGSYD---WSRKAYTMDPPLY 223

Query: 274 RDIID---NLARQGYVYEG 289
           R +I+    L   G +Y  
Sbjct: 224 RAVIENFCRLHEDGIIYRA 242


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 90/251 (35%), Gaps = 43/251 (17%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D   N   +  + EG   P    T  + + D   + F S               GS    
Sbjct: 508 DAWWNHTAEELLPEGTKCPKCGGTHFRKEKDIMDVWFDS---------------GSSH-- 550

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +   K + E  +   +Y+ GSD   G+ +     + AV+ K    +VL    V    
Sbjct: 551 ---MGVCKRRPELSWPADMYLEGSDQHRGWFQSSLLTSVAVTGKAPYRSVLTHGYV---L 604

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +  + V+D+ G+D VR         + +      +K+ ++      
Sbjct: 605 DGEGRKMSKSLGNVVVPQEVIDQYGADIVRLWAASSDYKQDVRISPVILKQLAE------ 658

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IE 510
              AY + R+  R    +    DFD   + V   E E +  +  L+     +  +   + 
Sbjct: 659 ---AYRKVRNTIR--YILGNTHDFDYETQKVAFAEME-ELDQWALM----RFEALKKDVT 708

Query: 511 NATIAQEPYKL 521
            A    + + L
Sbjct: 709 EAYETYDFHVL 719


>gi|219681724|ref|YP_002468110.1| valyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471423|ref|ZP_05635422.1| valyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|219624567|gb|ACL30722.1| valyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 955

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 79/274 (28%), Gaps = 47/274 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P ++ + L         +  N + K T   +     N TG +H+GH     + D L   
Sbjct: 6   NPKHIEESLYFFWEKNGFFKPNHLEKSTFCIM-MPPPNITGSLHMGHAFQQTIMDILIRY 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     L                               V +++
Sbjct: 65  HRMQGKNTFWQVGTDHAGIATQIL-------------------------------VERQI 93

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K      ++  + ++  + ++  Q+   II   ++ L I  D    +        + +
Sbjct: 94  FEKEQKTKKDYSRDDFIKKIWEWKKQS-SNIITKQMRRLGISVDWDYEKFTLDPDISNSV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLF------RSTMVGDD 319
           R+    L +   +Y+           +    D        + +  F       + M    
Sbjct: 153 REAFIILYKNNLIYQKKKLVHWDSKLETVISDLEVEHRLIKGKKWFIRYPIIENDMSLRS 212

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             + L+ S         D A      +  ++  I
Sbjct: 213 KVKYLIVSTTRPETLLGDTAIAVNPEDYKYNQFI 246


>gi|165976930|ref|YP_001652523.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|254783548|sp|B0BR94|SYV_ACTPJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165877031|gb|ABY70079.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 954

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|170288799|ref|YP_001739037.1| valyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176302|gb|ACB09354.1| valyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 865

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 62/216 (28%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +             +    +  G K +I     N TG +H+GH     + D + 
Sbjct: 7   RYNPAEIETKWYRYWEEKGYFTPKGV--GEKFSIVIPPPNITGRIHMGHALNITLQDIVV 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                    V W              E +        V K
Sbjct: 65  RYKRMKGYD--------------------VLWVPG-----------EDHAGIATQNAVEK 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L             EK+L I  +++     + IR+ +KAL    D          G   
Sbjct: 94  FLLQTQGKTREEIGREKFLEITWEWA-NKYRREIREQIKALGASVDWTRERFTLDEGLSR 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L R+G +Y G          +    D +
Sbjct: 153 AVRKVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEE 188



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 42/241 (17%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +       K   +V + +LV   RD    K
Sbjct: 475 YPTDLLVTGFD-IIFFW-------VARMIMMGYEFMNDKPFSHVYIHQLV---RDKYGRK 523

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V+DE G+D +RF  L    ++  D             P ++  Y   
Sbjct: 524 MSKSLGNGIDPLEVIDEYGADPMRFT-LAILAAQGRDIKLD---------PRYFDAY--- 570

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             +    +  +    +  +L     +P E+     +  ++  L +    + NA    +  
Sbjct: 571 --KKFANKIWNATRFVLMNLEDYKEVPLENLKTVDKW-ILTRLNKTVEEVTNALENYDFN 627

Query: 520 KLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             A       ++++  W              ++   R L      LV     ++++ L +
Sbjct: 628 IAAR------TIYNFFWDDFCDWYIEASKPRLKTEERNLVQT--VLVK----VLDASLRL 675

Query: 577 I 577
           +
Sbjct: 676 L 676


>gi|33864455|ref|NP_896015.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33641235|emb|CAE22365.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 947

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 68/242 (28%), Gaps = 49/242 (20%)

Query: 60  DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK----------ILSSIVVSG 109
            P   A ++  R+     V  +  A   F+    +   L K             +   SG
Sbjct: 3   APRPFASMV--RMPSTFIVTELSAADPAFVQ---AADALAKTYDPAGTESRWQCAWEESG 57

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           + +       G   ++     N TG +H+GH     + DT+       G           
Sbjct: 58  VFHPDPQA-AGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQG----------- 105

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
                           +  L    +D        +  K +  E   +Y      F E  W
Sbjct: 106 ----------------KNVLCLPGTDHASIAVQTILEKQLKAEAISRYDLGREAFLERAW 149

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
               K+ S       I D L+ L    D          G  + +R+    L  QG +Y G
Sbjct: 150 --AWKEESG----GRIVDQLRRLGYSVDWQRQRFTLDEGLSAAVREAFVRLHEQGLIYRG 203

Query: 290 IL 291
             
Sbjct: 204 EY 205



 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 112/359 (31%), Gaps = 43/359 (11%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W  + +D+  +     I   L     +   +    +           ++     +   +
Sbjct: 423 RWQKVYRDWLTEIRDWCISRQLW-WGHRIPAWFVVSETDDQLTDATPYLVARSEEE--AW 479

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK--CKY 345
           +            + D D     F S +             G     +ADL  +      
Sbjct: 480 QQARDQFGEAVVIQQDEDVLDTWFSSGLWPFSTM-------GWPDQESADLECWYPTSTL 532

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG
Sbjct: 533 VTGFD-IIFFW-------VARMTMMAGAFTGRMPFADVYIHGLV---RDEQNRKMSKSAG 581

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I    +++  G+D++RF ++        D      ++      V   +    +  +  
Sbjct: 582 NGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNAT 641

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKL-- 521
           R A                     E D + LQL     L+   R+  +     + Y+L  
Sbjct: 642 RFALMN--------LGGETPASLGEPDPASLQLADRWILSRLARMNRDVVERYDSYRLGE 693

Query: 522 -AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NII 577
            A  LY+ A +     +    +        A+   L         A   ++   L +++
Sbjct: 694 AAKCLYEFAWNDICDWYLELSKRRLHPGEDASGEVLADQ----CTA-RQVLAKVLADLL 747


>gi|316984442|gb|EFV63415.1| isoleucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 809

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|218193568|gb|EEC75995.1| hypothetical protein OsI_13120 [Oryza sativa Indica Group]
          Length = 1061

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 59/338 (17%), Positives = 101/338 (29%), Gaps = 54/338 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   S   S   +G +         I     N TG +H+GH     + D++   
Sbjct: 97  SPTAVEKSWYSWWESSGYFGADAASSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRW 156

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +        D+    +    LK      
Sbjct: 157 RRMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTR---HDIGREEFVSEVLK-----W 208

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y   +LN                         L+ L    D         +     +
Sbjct: 209 KDEYGGTILNQ------------------------LRRLGASLDWSRECFTMDKPRSKAV 244

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDG-SY 331
            +    L +QG +Y          T +    D + +  F      +  +  +LK  G + 
Sbjct: 245 TEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVEVVETFYCVDYLEIKEETMLKVPGYNT 304

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----AVSEKKAQINVLLCE 387
           T     L  F    E G   +I            R+E +      AV  +  + N L   
Sbjct: 305 TVQFGVLISFAYPLEEGLGEIIVAT--------TRIETMLGDTAIAVHPEDGRYNHLHGR 356

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRF 424
                 +G  +K+       I    +VD   G+ +V+ 
Sbjct: 357 YAIHPFNGRKLKI-------ICDAELVDPTFGTGAVKI 387


>gi|169335812|ref|ZP_02863005.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258550|gb|EDS72516.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
           17244]
          Length = 651

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 73/439 (16%), Positives = 150/439 (34%), Gaps = 71/439 (16%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  I    A  +G  H+G+    V+ D++A     +GY+V  +   ++ G +I T 
Sbjct: 1   MSKKPYYISTAIAYTSGKPHIGNTYEIVLADSIARYKRLTGYDVYFQTGTDEHGQKIETK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       Q+ + N   ++         +  +     DK+      + E+K   I K   
Sbjct: 61  ANEAGITPQKFVDNVSEEI-------HRIWDIMNTSYDKFVRTTDPYHEKKVQQIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q    I +D+ + +  +  + F +E     G        +     + Y ++      + 
Sbjct: 114 EQG--DIYKDEYEGMYCEPCESFFTESQLIDGKCPDCGREVSYEKEEAYFFKLSKYADRL 171

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD-- 350
               +   +  Q   R   + ++  +P LK          DL   +  ++ G    FD  
Sbjct: 172 MEYIETHPEFIQPESRKNEMVNNFLKPGLK----------DLCVSRTSFKWGIPVDFDPG 221

Query: 351 NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +++YV                 G+    Y K   A    + +   + + L   ++ +  D
Sbjct: 222 HVVYVWIDALSNYITFLGYDPDGNHEENYNKYWPADVHLIGKDILRFHTLYWPIMLMALD 281

Query: 395 G--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                             KMSK  G+ I    +VD  G DSVR+ +L     ++     +
Sbjct: 282 LPLPKQIFGHPWLLLGEGKMSKSKGNVIYADDLVDLFGVDSVRYYLLREMPFAQDGTLTY 341

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLD---FDLFPRNVIPQES 489
            ++ ++     V  +     R  ++ ++  D          D+D    +L  +  +  E 
Sbjct: 342 EQLIDRINGELVNILGNLVNRTIAMSKKYFDSIVSNPKDIEDIDNELIELTEKTPLLVEE 401

Query: 490 EFDT----SELQLIVHLAE 504
           + +       + LI+ LA 
Sbjct: 402 KMNELKVADAINLIIALAR 420


>gi|146298467|ref|YP_001193058.1| isoleucyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146152885|gb|ABQ03739.1| isoleucyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 1133

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 93/262 (35%), Gaps = 37/262 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            DF  G+ S     + +L +   V + I     S    K + D   + F S  +      
Sbjct: 562 KDFEIGNMSESNYDLIDLHKN--VVDAITLVSASGKPMKRESDLIDVWFDSGAMPY---- 615

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM--GSDH-SGYVKRLEAVAAAVSEKKA 379
                   + Y   +    K K +   D     +  G D   G+   L A+   V +K A
Sbjct: 616 ------AQWHYPFEN----KEKIDDNKDFPANFIAEGVDQTRGWFYTLHAIGTLVFDKVA 665

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFD 438
             NV+   LV    D   IKMSK  G+ I     + E G D+ R+ M+   N  + L FD
Sbjct: 666 YKNVVSNGLV---LDKNGIKMSKSKGNTIDPFKTIAENGPDATRWYMIMNANPWDNLKFD 722

Query: 439 FCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL- 496
              + E + K     Y  Y++         A       +    P N  P+  ++  SEL 
Sbjct: 723 LEGIAEVKRKFFGTLYNTYSFFSLY-----ANIDGFKYEEAEIPLNERPEIDQWIISELH 777

Query: 497 QLIVHLAEYPRVIENATIAQEP 518
            LI     +   ++      EP
Sbjct: 778 SLIK----F---VDECYEDYEP 792


>gi|307292797|ref|ZP_07572643.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880863|gb|EFN12079.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 520

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 63/424 (14%), Positives = 121/424 (28%), Gaps = 61/424 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A        +V  +   ++ G ++   A +     ++    
Sbjct: 14  PNGRPHIGHAYEVIATDAIARFQRMMDRDVFFQTGTDEHGLKMAQTARNRGIEPRELADE 73

Query: 192 NDSDLPE--GYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIR 246
             S            Y + +     D +S+             L + +     ++     
Sbjct: 74  MSSYFKAMNDGLNISYDRFIRTSEPDHHSASQAIWQAMEANGDLYLGRYEGWYSVRDEAF 133

Query: 247 DDLKAL-----------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            D K L                 +  E+ +     +  + ++D    Q       + P  
Sbjct: 134 YDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYTGQ----PDFIQPDS 189

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-------FKCKYERG 348
            +      ++        +    D    +  SDG   Y   D          +    ER 
Sbjct: 190 RRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYLTGCGYPDDLERM 249

Query: 349 F------DNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   ++ +V+G D    + R   V   A  +S K      +      L R     K
Sbjct: 250 ARYWAEGGDITHVIGKD----IVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRG---EK 302

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA-Y 458
           MSK  G+      + +  G D +R+ +L                E +  N   Y   A  
Sbjct: 303 MSKSLGNVADPMELAERFGVDQLRYFLLS---------------EVTFGNDGSYSAEAIV 347

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--QLIVHLAEYPRVIENATIAQ 516
            R  S    +             +N+  +  E    E+   L+  +AE  +  + A +  
Sbjct: 348 TRSNSDLANSFGNLAQRTLSFIAKNLEGRLPEPAPQEVDGDLLKTVAEAAQTFQAAMVDL 407

Query: 517 EPYK 520
            P  
Sbjct: 408 APST 411


>gi|262374478|ref|ZP_06067752.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310474|gb|EEY91564.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 945

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 109/334 (32%), Gaps = 47/334 (14%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSK 297
             I R     + I   +    +  H   P  I ++   + ++G    Y  +         
Sbjct: 475 WCISRQRTWGVPIPFFVHKDTNALHPRTPELIEEVAKLIEQEGIDGWYNRDASDFIGADA 534

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D   + F S               G+  Y     A  + + E      +Y+ G
Sbjct: 535 EQYNAVRDTLDVWFDS---------------GTTHY-----AVLREREELQDPADLYLEG 574

Query: 358 SDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SD   G+ +     + A++E+     +L    V    D    KMSK  G+ IT + ++ +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVV---DEKGRKMSKSLGNIITPQDIIKD 631

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPD 474
           +G+D +RF +         +    K       +        Y R R+  R   A      
Sbjct: 632 MGADGLRFWIAS--ADYRYEMTAGKEIFSRASD-------GYRRIRNTLRFLLANLNGFK 682

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFH 533
              D  P N +    ++      ++   AE  + I+ A      + +   L +   +   
Sbjct: 683 PSTDALPVNELIALDQY------ILQRAAEVQKTIQQAYEEMNFHIVTNALTNFCINDLG 736

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
           G +    ++ +    +A+++     +  L H V 
Sbjct: 737 GFYLDIIKDRQYTT-KADSQARRSAQTALYHLVQ 769


>gi|210623269|ref|ZP_03293686.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
 gi|210153670|gb|EEA84676.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
          Length = 644

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 114/390 (29%), Gaps = 135/390 (34%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D +A    F GY+V                         + L  
Sbjct: 15  PSGKLHIGHTYTTVAADAIARFKRFCGYDV-------------------------KFLTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D         G  ++   KE             E ++L          M+  I+   K 
Sbjct: 50  TDE-------HGEKIQKKAKE---------AGMTEIEYL--------DGMIADIKALWKK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           L+I +D FI            I+ I   L  QG +Y+G                      
Sbjct: 86  LDISYDDFI--RTTEPRHTEIIQKIFTKLYEQGDIYKGTYEGRYCTPCESFWTESQLIDG 143

Query: 296 ----SKTTQKCDMDRKQLLFRSTMVG---------DDVDRPLLKSDGSYTYF----AADL 338
                   +      +   F+ +            DD   P+ + +   + F      DL
Sbjct: 144 TKCPDCGRETYVAKEEAYFFKLSKYEDRLKELFSRDDFCLPVSRRNEMVSNFLDKGLEDL 203

Query: 339 AYFKCKYERG----FD--NMIYVM-----------------GSDHSGY-----------V 364
              +  ++ G    FD  ++IYV                    +   Y           +
Sbjct: 204 CVTRTTFDWGIPVPFDEKHVIYVWVDALCNYITALGYMTDNDEEFKKYWPASVHLTAKEI 263

Query: 365 KRLE-----AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            R       A+  A+  +  +  V     +    D    KMSK  G+ +    +++  G 
Sbjct: 264 TRFHTIIWPAILMALGLEVPK-QVYGHGWILFDDD----KMSKSKGNVVYPGPMIERYGV 318

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D++++ +L        +F F +    +  N
Sbjct: 319 DALKYFLLR-------EFSFGQDGSYTNRN 341


>gi|199597497|ref|ZP_03210926.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199591520|gb|EDY99597.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 880

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 71  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 100 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 158 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 189


>gi|313900097|ref|ZP_07833597.1| glutamate--tRNA ligase [Clostridium sp. HGF2]
 gi|312955149|gb|EFR36817.1| glutamate--tRNA ligase [Clostridium sp. HGF2]
          Length = 486

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 121/351 (34%), Gaps = 76/351 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MH+G+ R A+          GD +  +      +  +E Y+  A         
Sbjct: 9   APSPTGYMHIGNLRTALFEYLIAKHEDGDFILRI-----EDTDQERYVEGA-------VE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            ++   ++   ++D     G   G Y++     +  +Y+ +L++     +      +  +
Sbjct: 57  IIYDTMKEVGLHHDEGPDIGGDFGPYVQSERLPMYKEYADQLVDLGGAHYC-----FCGE 111

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDIIDNLARQGYVYEGILPPPKS 296
             ++  R + ++L I          F   DP     + +  + +A +G  Y         
Sbjct: 112 EEIEKQRKEAESLGI---------SFKYDDPCKHVSVEEARERIA-KGEKYVVRQTIRHD 161

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   D    ++   ++++ +     LLKSDG  TY  A++      ++ G  ++  V 
Sbjct: 162 GETYFDDEVYGRIEVDNSILDES---VLLKSDGYPTYNFANI---VDDHQMGITHV--VR 213

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT------- 409
           G+++     +   +  +         +     V         K+SKR GD          
Sbjct: 214 GNEYLSSTPKYNLIYQSFGWD-----IPTYVHVPPVMKDEQHKLSKRNGDASFQDLVKKG 268

Query: 410 --LRHVVDEVGS---------------DSVRFMMLWRKNSELLDFDFCKVK 443
                +++ +                 + ++   + R +     FD  K+ 
Sbjct: 269 YLPEAILNYIALLGWSPETEQEIYTLDELIKVFDIKRISKSPAIFDIDKLT 319


>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 921

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  EL+    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG   P       + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENAVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|91227670|ref|ZP_01261947.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188449|gb|EAS74743.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 942

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 101/304 (33%), Gaps = 40/304 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H      I  +   + 
Sbjct: 447 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIEKVAKLVE 506

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G           +      D D+ + +  +  V  D         G   +   D    
Sbjct: 507 EKGI---QAWWDVDAAELLGADADQYEKVLDTLDVWFDS--------GVTHFSVVDA--- 552

Query: 342 KCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
             + E   ++  +Y+ GSD   G+ +     + A+ ++     VL    V    DG   K
Sbjct: 553 --REEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGQGRK 607

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY 
Sbjct: 608 MSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYR 658

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+  R         + +    +++P E         +   LA    ++  A      +
Sbjct: 659 RIRNTARFFLANLSGFNPE---TDIVPVEEMVALDRWAVGRALAAQEEIV-KAYEEYNTH 714

Query: 520 KLAF 523
            +  
Sbjct: 715 GVTQ 718


>gi|52550379|gb|AAU84228.1| methionyl-tRNA synthetase [uncultured archaeon GZfos3D4]
          Length = 541

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 81/533 (15%), Positives = 158/533 (29%), Gaps = 107/533 (20%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL- 179
             V +        G  H+GH R  V  D    ++   GY+V      +  G  I   A  
Sbjct: 7   KPVLVTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGYDVIFISGSDTHGTPIVLSAEA 66

Query: 180 -------------SVFWRYQQALYNN-------DSD------------LPEGYY------ 201
                          F R  QAL  N       DS+            L E  Y      
Sbjct: 67  QGITPEEVVKKYHEHFKRMFQALNVNFDYYGRTDSESNHRRTTEIVKKLIENGYVHKKET 126

Query: 202 PGVYLKHVGKELADKYSSELL---------NFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
              +    G+ L D+Y              +  ++     ++   +      +       
Sbjct: 127 KQAFCNTCGRFLPDRYVEGKCPYCGAVARGDECDQGCGKHLEPGEIIEPRCKLCGSKADF 186

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
             Q   F +   F     + + +I   L  + Y  E +    K +    C     +   +
Sbjct: 187 KQQEHFFFNLSSFADFLIAYLDNIGGTLNARNYAKEWV----KKELRDWCVTRNLEWGVK 242

Query: 313 STMVGDDVDRPLLKSDGSYTYF---------AADLAYFKCKYERGFDNMIYVMGSD---H 360
               G D     +  D    Y            D   ++  ++     +++ +G+D   H
Sbjct: 243 --FPGRDELVVYVWVDAPIGYISFTEELLNYTTDENDWRKYWKGNEATIVHFIGTDIIYH 300

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                   A+           + ++   +     G     SK  G+ I ++  ++    D
Sbjct: 301 HCIF--WPAMLKGAGYSLP--DAVVASGMVKINGGT---FSKSRGNVIWVKEFLERFHPD 353

Query: 421 SVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           ++R+ ++ + + ++ L+F +     +     V  +     R  S   +   + P+ D D 
Sbjct: 354 TLRYYLVAQSSHTKELNFSWDSFSMRVNNELVAILGNLVHRVVSFAYKNFRVVPEGDVDE 413

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF-HGHWSH 538
                I +  +                 +I +A    E  KL      LA  F +  +  
Sbjct: 414 DVFAAIARTKQ----------------EMI-SAVEEYEFKKLVDSAMKLA-DFGNSFFQR 455

Query: 539 GRENPRLRFVQANNR---KLTMMRLQLVHAVASIINSGLNIIGVES--PNEMS 586
                 ++   A      ++    LQL+ AV           G+E+  P +M+
Sbjct: 456 EEPWHLIKKGDAGRERCGEIVRNVLQLIKAVCI---------GLEAVMPAKMA 499


>gi|76787836|ref|YP_328838.1| glutamyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76562893|gb|ABA45477.1| glutamyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 478

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 100/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 58  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 101

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 102 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVSESGI 159

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 160 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHVMQISHVIR--GD 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 213 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|53728827|ref|ZP_00134966.2| COG0525: Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208966|ref|YP_001054191.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|171855097|sp|A3N2F0|SYV_ACTP2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|126097758|gb|ABN74586.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 954

 Score = 51.5 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 910

 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 53/304 (17%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +  + EG   P         +MD   + F S               G+           
Sbjct: 500 AKELLPEGYTHPGSPNGEFTKEMDIMDVWFDS---------------GTSH---QGCCAV 541

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           +       D  +Y+ GSD   G+       + A+S       ++    V    DG   KM
Sbjct: 542 RDDLTYPAD--LYLEGSDQYRGWFNSSLITSVAISGDAPYKELVSAGFVM---DGNGNKM 596

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ I+   V  ++G++ +R        ++ +      +K+ S+          Y +
Sbjct: 597 SKSLGNVISPNDVGKQLGAEIIRLWSASVDYTQDVRISNDILKQVSE---------TYRK 647

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQE 517
            R+ FR       +  FD     +   E E           + ++ +V+          +
Sbjct: 648 IRNTFRFLLGNLFNGSFDNRTDLLSYDELEELDK-----YMVLKFEKVVAKVLDYYENYQ 702

Query: 518 PYKLAFYLYDLASVFH----GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              +     +L + F+      +         + +     + +  RL ++  + ++++  
Sbjct: 703 FNSITT---ELINFFNVELSSFY-----LDYGKDILYIEAEKSHKRLSMLTVLYTVLSKS 754

Query: 574 LNII 577
           + ++
Sbjct: 755 VRLL 758


>gi|317484563|ref|ZP_07943470.1| isoleucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924189|gb|EFV45368.1| isoleucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 941

 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 67/342 (19%), Positives = 117/342 (34%), Gaps = 47/342 (13%)

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISED 263
              EL  K    + N  + +W+P   +  +  M++  R D      +   +     + ED
Sbjct: 425 EANELRQKALKAIRN--DVEWIPSWGEERIYNMIE-QRPDWCISRQRLWGVPILALLCED 481

Query: 264 DFHR-GDPSPIRDIIDNLARQ----GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
                 DP  +RDI    A+      Y YE  +     +   KC     Q   R + + D
Sbjct: 482 CGEAWNDPEWMRDIAARFAKHPTGCDYWYEADMKDIVPEGL-KCPKCGGQHWKRESDILD 540

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK 377
                 +  D   ++     A  + + E GF   +Y+ GSD   G+      + A++  +
Sbjct: 541 ------VWFDSGTSFA----AVLEKRPELGFPADLYLEGSDQHRGWFHSS--LLASIGTR 588

Query: 378 --KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
                  VL    V    DG   KMSK  G+ I L  ++ + G++ +R  +      E +
Sbjct: 589 GVPPYKAVLTHGYVV---DGEGRKMSKSIGNGIELDEIISKHGAEIIRMWVSSVDYREDV 645

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 V              AY R R+  R         D        +      D   
Sbjct: 646 RISAEIVNRLVD---------AYRRIRNTCRYLLGNLK--DVAKADLVDVKDMDPLDRYA 694

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
           L +    A   + +++A    E +K+   L++L S      +
Sbjct: 695 LDVA---ARTHQRVQDAYRDYEFHKVFHSLHNLCSTDLSAFY 733


>gi|309803733|ref|ZP_07697819.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164142|gb|EFO66403.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 501

 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 106/308 (34%), Gaps = 37/308 (12%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
              K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + +
Sbjct: 4   AKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSKS 61

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G   G Y +   K++ +KY  +LL+         
Sbjct: 62  QMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----KA 108

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              Y+    ++  R++ +A+ I         ++       I+        +G      + 
Sbjct: 109 YYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRIH 165

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     +
Sbjct: 166 IPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMEI 217

Query: 353 IYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +V+ G DH     +   V  A +    +       +  +       K+SKR    +   
Sbjct: 218 THVLRGDDHVANTPKQLVVYKAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQFI 273

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 274 EQYRDLGY 281


>gi|258539468|ref|YP_003173967.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151144|emb|CAR90116.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 880

 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 71  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 100 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 158 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 189


>gi|225569430|ref|ZP_03778455.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
 gi|225161638|gb|EEG74257.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
          Length = 885

 Score = 51.5 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 50/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIEPKLYEKWCESKYFHAEVDRSRKPFTTVMPPPNITGRLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E             
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKELGR--EKFLERTW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  ++Y+                          I   LK L +  D          G   
Sbjct: 119 QWKEEYA------------------------GTIEGQLKKLGVSCDWDRERFTMDDGCSE 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEEGYIYKG 172


>gi|302389257|ref|YP_003825078.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199885|gb|ADL07455.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 882

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 56/204 (27%), Gaps = 35/204 (17%)

Query: 88  FINL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           F N+     P  +             +   +  +     I     N TG +H+GH     
Sbjct: 3   FTNIPSVYDPKNVEDKWYRFWEEQNLFRAEIDPEKEPFTIVIPPPNVTGHLHIGHALNNT 62

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           + D L       GY                                    LP   + G+ 
Sbjct: 63  IQDILIRYKRMQGYPTL--------------------------------WLPGTDHAGIA 90

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
            +   KE   +      +   EK+L  V  +  +     I + LK L    D        
Sbjct: 91  TEAKVKEQLAEEGLSKYDLGREKFLERVWAWK-EKYGDTIVNQLKKLGASCDWSRFRFTL 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG 289
             G    +R++   L  +G +Y G
Sbjct: 150 DEGLSRAVREVFVRLYEKGLIYRG 173


>gi|312898319|ref|ZP_07757709.1| glutamyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620238|gb|EFQ03808.1| glutamyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 487

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 55/288 (19%), Positives = 101/288 (35%), Gaps = 50/288 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP H+G  R A+          G  +  +        TRE   N        +  
Sbjct: 10  APSPTGPFHIGGARSALFNYLVAAHNDGTFVVRVEDTDQKRSTRESEEN--------IKE 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++ W       N D  +  G   G Y +    +L  +Y+ +LL   +  +      +   
Sbjct: 62  ALHW----LGINWDEGIDVGGDHGPYRQMERLDLYRQYTEKLLAEGKAYYC-----FCTP 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKT 298
             ++  +D          +   E   + G  S +  + I     +G  +   +  PK KT
Sbjct: 113 EELEAEKD--------AQMAKGETPVYGGTCSHLSEEQIKQYLAEGRPHVIRIRTPKHKT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ R ++ F S  +GD     ++KSDG   Y       +    +     + +V+ +
Sbjct: 165 YEVDDIVRGKVPFDSDKIGDF---VIVKSDGVPVYN------YCVVLDDALMEITHVIRA 215

Query: 359 DHSGY-VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +       R   +  A+  +  +        V L       KMSKR G
Sbjct: 216 EEHLSNTPRQLVLYEALGFEPPKFAH-----VSLILGADKKKMSKRHG 258


>gi|302391303|ref|YP_003827123.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203380|gb|ADL12058.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 883

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 54/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +        +    +G  +        I     N TG +H+GH     + D L 
Sbjct: 9   TYDPAAVEDKWYEYWMENDCFGAEVDEDKESFTIVMPPPNVTGQLHIGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY           G    ++A  V                           V  
Sbjct: 69  RWKRMQGYSALWIP-----GTDHASIATEVK--------------------------VVN 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L ++   E  +   E +L    D+  +     I D LK L    D          G   
Sbjct: 98  KLREEEGLEKDDVGREGFLKRAWDWK-EEYGGRITDQLKKLGTSCDWSRERFTMDEGCSK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            +++    L  +  +Y G
Sbjct: 157 AVKEAFIQLYEKDLIYRG 174



 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ I     +DE G+D++RF ++        D  F + K ++  N 
Sbjct: 519 LVRDAQGRKMSKSLGNGIDPIEFIDEYGADTLRFTLVTGNTPGN-DMRFRQEKVEASRNF 577

Query: 451 V-FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           V      +     ++     +   +LD+ L  + +I   S  + +  ++   L +Y   I
Sbjct: 578 VNKIWNASRFVLMNLEDFDPEEVEELDYTLADKWII---SRLNETAQEVTRTLDKYQ--I 632

Query: 510 ENATIAQEPYKLAFYLYDLASVF--HGHWSHGRENPRLRFVQANNRKLTMMRLQLVH-AV 566
            NA            LYD    F  +       E  + R  Q  ++ +           V
Sbjct: 633 GNAAQT---------LYD----FIWNEFCDWYIELIKPRLYQDEDQVVKET----AQYVV 675

Query: 567 ASIINSGLNII 577
           +S++   L ++
Sbjct: 676 SSVLEQSLRLL 686


>gi|229470685|sp|Q3K3R5|SYE_STRA1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 484

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 100/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  +Y  +LL           K Y V
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQRYIDQLLAEG-----KAYKSY-V 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + + L  +   +I+E  F     +     I      G +    L   +S  
Sbjct: 108 TEEELAAERERQELAGETPRYINE--FIGMSETEKEAYIAEREAAGIIPTVRLAVSESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F  + +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGDIEFEGSNIG--GDWVIQKKDGYPTY---NFAVVIDDHVMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|163736567|ref|ZP_02143986.1| glutamyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161390437|gb|EDQ14787.1| glutamyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 466

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 88/303 (29%), Gaps = 67/303 (22%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQIN 175
           K  +   + +PTG +H+G  R A+     A       L+     +  R            
Sbjct: 3   KPVVTRFAPSPTGYLHIGGARTALFNWLYARGRGGKFLLRIEDTDRERSNP--------- 53

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               ++         ++D ++   +        V +EL  +       F  ++ +   +D
Sbjct: 54  EATAAILQGMAWLGLDHDGEVVSQFEGAERHAAVARELL-EAGKAYKCFATQEEIAAFRD 112

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +                        +   +R   SP RD            +    P  
Sbjct: 113 EAKAE--------------------GKSTLYR---SPWRDA-----------DDSSHPDA 138

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDV-------DRPLLKSDGSYTYFAADLAYFKCKYERG 348
               +         + R  + GD         D  LL+SDG+  Y    LA     ++ G
Sbjct: 139 PYVIRIKAPQDGTTVIRDEVQGDVTIKNAQLDDMVLLRSDGTPVYM---LAVVVDDHDMG 195

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++I   G DH     R   +  A+        V +   + L       K+SKR G   
Sbjct: 196 VTHVIR--GDDHLNNAARQMMIYEAMGWD-----VPVWAHIPLIHGADGKKLSKRHGALG 248

Query: 409 TLR 411
              
Sbjct: 249 AQE 251


>gi|225575677|ref|ZP_03784287.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037134|gb|EEG47380.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM
           10507]
          Length = 660

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 117/374 (31%), Gaps = 59/374 (15%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E    +I    K  I    A  +G  H+G+   AV+ D +A      GY+V  +   ++ 
Sbjct: 4   EEKETVIMAKEKYYITTAIAYTSGKPHIGNTYEAVLADAIARFKRQEGYDVFFQTGTDEH 63

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G +I   A       Q+ +    S +         +  +     DK+     ++ E +  
Sbjct: 64  GQKIEMKAQEAGVTPQKFVDGVASQIKS-------IWDLMNTSYDKFIRTTDDYHERQVQ 116

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            I K    Q    I +   + +     + F +E     G        +     + Y +  
Sbjct: 117 KIFKKLYEQG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPVTPAKEEAYFFRM 174

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                +         +  Q + R   + ++   P             DL   +  ++ G 
Sbjct: 175 SKYADRLIEHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGI 224

Query: 350 ------DNMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                 D+++YV                 G     + K   A    + +   + + +   
Sbjct: 225 PVDFDPDHVVYVWLDALTNYITGIGYDCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWP 284

Query: 388 LVRLYRDGMPI---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN- 431
           +  L   G+P+               KMSK  G+ I    +VD  G D+VR+ +L     
Sbjct: 285 IF-LMALGLPLPKQVFGHPWLLQGDGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPF 343

Query: 432 SELLDFDFCKVKEQ 445
                  +  + E+
Sbjct: 344 ENDGVITWELMVER 357


>gi|258508256|ref|YP_003171007.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148183|emb|CAR87156.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 880

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 71  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 100 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 158 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 189


>gi|325143835|gb|EGC66151.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 968

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 473 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 532

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 533 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 582

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 583 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 635

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 636 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 692

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 693 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 739


>gi|302328190|gb|ADL27391.1| methionine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 693

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 98/331 (29%), Gaps = 57/331 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V+ D L       GY+       ++ G ++         R          + 
Sbjct: 21  HIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKV--------QRAAAKRNVTPQEH 72

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM---KIIRDDLKALN 253
            + YY           + + +       PE K         +Q +    +I   + +   
Sbjct: 73  VDEYYHRFEDLWKKMNIQNDFF-IRTTMPEHKA---YVQECLQKLWDKGEIYSKEYEGWY 128

Query: 254 -IQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYE---------GILPPPKSKTTQKC 302
            +  + F SED+       PI    ++ L  + Y ++           L   K       
Sbjct: 129 SVGEERFFSEDELDENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYLESHKDWIVPDY 188

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +  +   R  +    + RP ++ S G    F  D   +       FD ++  + +  +
Sbjct: 189 RWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVW-----FDALLNYVSASTA 243

Query: 362 GYVK----------RLEAVAA-------------AVSEKKAQINVLLCELVRLYRDGMPI 398
            +                +                ++        +L     L   G   
Sbjct: 244 FHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLVNGGE-- 301

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK AG+ +     +++ G D+ R+ +   
Sbjct: 302 KMSKSAGNVVNPMDYMEKYGIDAFRYFLARE 332


>gi|222099723|ref|YP_002534291.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572113|gb|ACM22925.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 868

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 62/216 (28%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +             +    +  G K +I     N TG +H+GH     + D + 
Sbjct: 10  RYNPAEIETKWYRYWEEKGYFTPKGV--GEKFSIVIPPPNITGRIHMGHALNITLQDIVV 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                    V W              E +        V K
Sbjct: 68  RYKRMKGYD--------------------VLWVPG-----------EDHAGIATQNAVEK 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L             EK+L I  +++     + IR+ +KAL    D          G   
Sbjct: 97  FLLQTQGKTREEIGREKFLEITWEWA-NKYRREIREQIKALGASVDWTRERFTLDEGLSR 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L ++G +Y G          +    D +
Sbjct: 156 AVRKVFVELYKKGLIYRGKYIVNWCPRCKTVLSDEE 191



 Score = 36.8 bits (84), Expect = 9.7,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 46/243 (18%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +      +K   +V + +LV   RD    K
Sbjct: 478 YPTDLLVTGFD-IIFFW-------VARMIMMGYEFMNEKPFSHVYIHQLV---RDKYGRK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V+DE G+D +RF  L    ++  D             P ++  Y   
Sbjct: 527 MSKSLGNGIDPLEVIDEYGADPMRFT-LAILAAQGRDIKLD---------PRYFDAY--- 573

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             +    +  +    +  +L     +P E+     +      L    + ++  T A E  
Sbjct: 574 --KKFANKIWNATRFVLMNLEDYKEVPLENLKTVDKW----ILTRLNKTVKEVTSALE-- 625

Query: 520 KLAFYLYDLAS--VFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
               Y +++A+  +++  W              ++   R L    L         +++ L
Sbjct: 626 ---NYDFNIAARTIYNFFWDEFCDWYIEASKPRLKTEERHLVQTLLV------KTLDTSL 676

Query: 575 NII 577
            ++
Sbjct: 677 RLL 679


>gi|221633863|ref|YP_002523089.1| glutamyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155759|gb|ACM04886.1| glutamyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 506

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 80/429 (18%), Positives = 131/429 (30%), Gaps = 103/429 (24%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     +  R       G  I  +   + 
Sbjct: 11  APSPTGDLHVGGARTALFNWLFARQHGGAFILRIEDTDQARL-----VGQSIAGIIEGLK 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D   P     G Y++     L  +++  L+      +        ++ + 
Sbjct: 66  WLGLEWDEGPDIGGP----YGPYIQSQRLPLYREHARWLVEHG-HAYYCFCTPERLERVR 120

Query: 243 KIIRDDLK-ALNIQHDIFI----SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  R   +     +H  F+     E    RG+P+ IR                   P   
Sbjct: 121 QEQRARGEPPGYDRHCRFLPPEEVEARLARGEPAVIR----------------FKMPLEG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D+ R ++ + + ++    D  LLKSDG  TY  A                  V+ 
Sbjct: 165 VTTIVDLLRGEITYENRLL---QDLVLLKSDGFPTYHLA-----------------NVVD 204

Query: 358 SDHSG---YVKRLEA----------VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            DH     ++ R E           +  A   +   +  L    + L  DG   K+SKR 
Sbjct: 205 -DHFMEISHILRAEEWIPSAPLHAQLYRAFGWEMPVLCHL---PLILSPDGKG-KLSKRH 259

Query: 405 GDFITLR----------------------HVVDEVGSDS--VRFMMLWRKNSELLDFDFC 440
           G    L                           E+ S    ++   L   N     F+F 
Sbjct: 260 GATGVLEFKRLGYLPEAMINYLALLGWAYDAEREIFSREELIQLFRLEEVNPHPARFNFE 319

Query: 441 KVK--EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           K+    Q   N V  V     RC    R A  + P+ D    P     +E      +   
Sbjct: 320 KLLWMNQYYINHVLSVDEFARRCVPFLRDAGLVGPEADDPASPAFAYVREVVALVKDRA- 378

Query: 499 IVHLAEYPR 507
              L+E P 
Sbjct: 379 -KLLSEVPD 386


>gi|261401844|ref|ZP_05987969.1| isoleucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208001|gb|EEZ74456.1| isoleucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 929

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 114/366 (31%), Gaps = 54/366 (14%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G      L   +  +T+ C+   K        + D +D  +    GS 
Sbjct: 494 LLEKVAQKIEEKGIEAWFSLDKSELLSTEDCEHYDK--------LSDTMD--VWFDSGST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----LKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 +Y R R+          D +  +          E D   + L   L       E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARRLQ------E 700

Query: 511 NATIAQEPYKLAFYLYDLA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                  P     Y +  A               +    ++ RL   QA++R     +  
Sbjct: 701 RVAGDFYP----RYTFHFAVKDIVSFCSEDLGAFYLDILKD-RLYTTQADSRARRSAQTA 755

Query: 562 LVHAVA 567
           L H   
Sbjct: 756 LYHITR 761


>gi|209694172|ref|YP_002262100.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254782358|sp|B6EMY6|SYI_ALISL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|208008123|emb|CAQ78265.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 952

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 41/328 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            +  + A   +  L      +W+P      ++ M        I R     + I   +   
Sbjct: 430 FISMDQAGLRAKALEEVKSVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 489

Query: 262 EDDFHRGDPSPIRDIIDNLARQG-----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + H      I  +   +  +G      +    L      T  +  +D   + F S + 
Sbjct: 490 TSELHPDSLELIEKVAKLVEEKGIQAWWDLDIAELMGEDDATKYEKVLDTLDVWFDSGVT 549

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
              V       D    Y            ER     +Y+ GSD   G+ +     + A+ 
Sbjct: 550 HFSV------VDSREEYNFPQ-------EERTHSADLYLEGSDQHRGWFQSSLISSVAMK 596

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +
Sbjct: 597 GKAPYRQVLTHGFVV---DGNGRKMSKSVGNVVAPKDVTNKLGADILRLWVASTDYTNEV 653

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                ++ ++S +        AY R R+  R       +L+      +++P E       
Sbjct: 654 AVS-DEILKRSAD--------AYRRIRNTAR---FFLANLNGFNPETDIVPAEEMVALDR 701

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +    A    +I  +      +++  
Sbjct: 702 WAVGRAFAAQEEII-KSYDEYNLHEVTQ 728


>gi|220920435|ref|YP_002495736.1| isoleucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219945041|gb|ACL55433.1| isoleucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 989

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 80/234 (34%), Gaps = 29/234 (12%)

Query: 319 DVDRPLLKSDGSYTYFAAD------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVA 371
           DV      S  ++ +   D      LA  + + + G D ++Y+ GSD   G+       +
Sbjct: 572 DVLDVWFDSGSTHAFTLEDPVAFPGLAGIRRRRDGGDDTVMYLEGSDQHRGWFHSSLLES 631

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                +     VL    V    D    KMSK  G+ +  + V+   G+D +R  +     
Sbjct: 632 CGTRGRAPYDVVLTHGFV---LDPKGEKMSKSRGNVVAPQDVIAASGADILRLWVAASDY 688

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESE 490
           ++ L      +K  S+          Y + R+  R     +      D      +P+   
Sbjct: 689 TDDLRIGPPIIKTFSE---------TYRKLRNSLRWMLGTLAHHRPEDRVAPQAMPEL-- 737

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD--LASVFHGHWSHGREN 542
               E  ++  LAE    I  A    +  ++   L +  +       +   R++
Sbjct: 738 ----ERFILHRLAELDGEIREAYRTYDFKRVVA-LLNGFMTGDLSSFYFDVRKD 786


>gi|225620506|ref|YP_002721763.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225215325|gb|ACN84059.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 651

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 66/438 (15%), Positives = 141/438 (32%), Gaps = 68/438 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GHC C +  DT+A      GY+V      ++ G +I         R  +A   
Sbjct: 15  PSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKI--------ARKAEAAGT 66

Query: 192 NDSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                 +              +    Y     ++ E +   I K    +    I +   K
Sbjct: 67  TPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGY--IYKGSYK 124

Query: 251 ALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            L  +  + F +E    + D         +  ++    E      K     +  +D  + 
Sbjct: 125 GLYCVSDEAFFTESQVVKKDDGKFY--CPDCEKELEYKEEECYYLKLSEYGQWLIDYYK- 181

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM------- 356
                   +  +R              DLA  +   + G       ++ IYV        
Sbjct: 182 --EHPEFLEPKERQNEMLKNFLLPGLEDLAVSRKGLQWGIPCPVDSEHSIYVWIDALANY 239

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------------- 394
                    G D   Y K   A    V ++  + + ++  ++    D             
Sbjct: 240 ITALGYPEEGQD-ELYKKYWPADVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVYGHGWV 298

Query: 395 --GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                 KMSK +G+ +    ++D+ G D++R+ ++   N     + + +     + N   
Sbjct: 299 LFDDGKKMSKSSGNVVDPNTLIDKYGVDALRYFLMREINFGSDGY-YSQELFLKRINSDL 357

Query: 453 YVQYAYA--RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
              Y     R  ++  +  +       ++ P  V   ES +   E +L   +      +E
Sbjct: 358 ANDYGNLWHRITTMLGKYFN-------NILPDEV---ESVYGDREKELKKMVLTLDANVE 407

Query: 511 NATIAQEPYKLAFYLYDL 528
           +A  + + ++   Y++++
Sbjct: 408 SALDSYKFHEALSYIWEV 425


>gi|39997143|ref|NP_953094.1| valyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81702023|sp|Q74BJ6|SYV_GEOSL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39984033|gb|AAR35421.1| valyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506156|gb|ADI84879.1| valyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 887

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + +           +  N        +I     N TG +H+GH     + D L    
Sbjct: 12  PTAVERKWYETWEQEGYFRANPDSGKPSYSIVIPPPNVTGALHMGHALNNTLQDILCRWK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +GYEV                           L+   +D        V  + +  E  
Sbjct: 72  RMNGYEV---------------------------LWMPGTDHAGIATQNVVERQLAGE-- 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               +       E ++  V  +  ++  +II   LK L    D          G    +R
Sbjct: 103 ---GTSRHELGREAFIERVWKWKAESGGQIIGQ-LKRLGASCDWGRERFTMDEGLSRAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +G +Y  
Sbjct: 159 EVFVRLYEEGLIYRD 173


>gi|261417229|ref|YP_003250912.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373685|gb|ACX76430.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 690

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 98/331 (29%), Gaps = 57/331 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V+ D L       GY+       ++ G ++         R          + 
Sbjct: 18  HIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKV--------QRAAAKRNVTPQEH 69

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM---KIIRDDLKALN 253
            + YY           + + +       PE K         +Q +    +I   + +   
Sbjct: 70  VDEYYHRFEDLWKKMNIQNDFF-IRTTMPEHKA---YVQECLQKLWDKGEIYSKEYEGWY 125

Query: 254 -IQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYE---------GILPPPKSKTTQKC 302
            +  + F SED+       PI    ++ L  + Y ++           L   K       
Sbjct: 126 SVGEERFFSEDELDENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYLESHKDWIVPDY 185

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +  +   R  +    + RP ++ S G    F  D   +       FD ++  + +  +
Sbjct: 186 RWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVW-----FDALLNYVSASTA 240

Query: 362 GYVK----------RLEAVAA-------------AVSEKKAQINVLLCELVRLYRDGMPI 398
            +                +                ++        +L     L   G   
Sbjct: 241 FHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLVNGGE-- 298

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK AG+ +     +++ G D+ R+ +   
Sbjct: 299 KMSKSAGNVVNPMDYMEKYGIDAFRYFLARE 329


>gi|325685641|gb|EGD27724.1| glutamate--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 483

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 94/289 (32%), Gaps = 34/289 (11%)

Query: 136 MHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           MH+G+ R A+     A       ++     +  R      A +QI  L     W      
Sbjct: 1   MHIGNARTALFNYLFARHNKGTLVLRIEDTDTAR-NVEGGAESQIENL----HWLGIDWD 55

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
              D     G   G Y +   K++  KY  +LL   E K     K        +  +   
Sbjct: 56  EGPD----IGGDYGPYKQSERKDIYQKYIDQLLE--EGKAYYSFKTEEELEAQREEQ--- 106

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +A+ I         ++       I+   D    +G      +  P+  T +  D+ +  L
Sbjct: 107 RAMGIAPHYAY---EYEGMTTDEIKQAQDEARAKGLKPVVRIHIPEGVTYEWDDIVKGHL 163

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
            F S  +G D    + K DG  TY   + A     +     +++   G DH     +   
Sbjct: 164 SFESDTIGGDF--VIQKRDGMPTY---NFAVVVDDHLMEISHVLR--GDDHISNTPKQLC 216

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           V  A+  +      +   +  +       K+SKR    +       E+G
Sbjct: 217 VYEALGWEAP----VFGHMTLIINSATGKKLSKRDESVLQFIEQYRELG 261


>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
          Length = 487

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 80/435 (18%), Positives = 146/435 (33%), Gaps = 79/435 (18%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  KV++          +H+G+ R  +V DT+     + GY+VT   Y+ +       
Sbjct: 18  PRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGYQVT---YVQN----FTD 70

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           +   +  R ++   N D       Y   Y K              L   E    P V ++
Sbjct: 71  IDDKIINRARE--ENTDPITLAAKYIREYFKDAAA----------LGVREATVHPRVSEH 118

Query: 237 SVQAMMKIIRDDLK---ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +  ++++IR  +K   A  +  D++ S               +++    G +    L  
Sbjct: 119 -LDEIIEMIRGIMKNGYAYQLDGDVYFS---------------VESFKGYGKLSGRSLED 162

Query: 294 PKSKTTQKCDMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            ++      D  ++      L   +       D P  K  G   +     A        G
Sbjct: 163 MQAGARVDVDTRKRHPMDFALWKAAKPGEPAWDSPWGK--GRPGWHIECSAMANKYLGMG 220

Query: 349 FDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           FD  I+  G D     H   + + EA A      +  ++     +          KMSK 
Sbjct: 221 FD--IHGGGFDLIFPHHENEIAQAEAYAGCGPFARYWMHNGFITV-------NEEKMSKS 271

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+F T+R ++ +   + VRF ML       LDFD  K++   K   +  +  A     S
Sbjct: 272 LGNFFTVREILAKYDPEVVRFYMLSTHYRSPLDFDDTKLEMNRKS--LSRLHNALDNIES 329

Query: 464 IFRQ---AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
           I +     +   P+L+  L       +++  D  E        ++   +  A        
Sbjct: 330 ILKTNKFGEVENPELEKALADLLRAREKAVRDFEE----AMDDDFNTALAIAV------- 378

Query: 521 LAFYLYDLASVFHGH 535
               L+DLA   +  
Sbjct: 379 ----LFDLARDSNAF 389


>gi|189501921|ref|YP_001957638.1| glutamyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|238692306|sp|B3ERQ7|SYE_AMOA5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|189497362|gb|ACE05909.1| hypothetical protein Aasi_0504 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 512

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 99/291 (34%), Gaps = 43/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTG +H+G  R A+    LA       ++     +  R     E YI D    +   
Sbjct: 10  APSPTGALHIGGVRTALYNYLLARKHQGKFILRIEDTDQNRFVPGAEQYIIDTLQWLGI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                        + D  + +G     Y +   K++  KY+ +L+             + 
Sbjct: 69  -------------DPDEGIQQGGPFAPYRQSDRKDMYRKYADQLVQAG-----KAYYAFD 110

Query: 238 VQAMMKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               ++ +R+ L+A  +    +  IS +        P  ++   +   G  Y      P 
Sbjct: 111 TPEELEAMRERLQAAKVASPQYNAISREWMKNSLTLPQEEVTARINA-GEPYVIRFKMPH 169

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +  D  R  +   ++ +    D+ LLKSDG  TY    LA     Y     ++I  
Sbjct: 170 KEIVRFYDQVRGWVKVETSTLD---DKVLLKSDGMATYH---LANVVDDYLMQISHVIR- 222

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G +          +  A   ++     +   ++         K+SKR  D
Sbjct: 223 -GEEWLPSAPLHILLYQAFGWEQTMPQFVHLPILLKPEG--HGKLSKRDAD 270


>gi|160933630|ref|ZP_02081018.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
 gi|156867507|gb|EDO60879.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
          Length = 874

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 57/201 (28%), Gaps = 37/201 (18%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L+ +Y    +   +    + G  +   +  +     I     N TG +H+GH     + D
Sbjct: 5   LAKAYEPREVEDRIYDFWLQGGYFHAEVDPEKKPYTIVIPPPNITGQLHMGHALDETIQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       GY                            AL+   +D          ++ 
Sbjct: 65  ILIRFKRMQGYS---------------------------ALWLPGTDHASIATEAKIVEA 97

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + KE   K       F E  W    K          I + LK L    D          G
Sbjct: 98  MKKEGLTKEDVGREGFLERAWDWKAK------FGGRIVEQLKKLGSSCDWERERFTLDEG 151

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               ++++   L  +G +Y G
Sbjct: 152 CSEAVKEVFVRLYEKGLIYRG 172



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 14/117 (11%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             +L+YF        G+D +I+   +        + +    + +   +          L 
Sbjct: 470 TPELSYFYPTDTLVTGYD-IIFFWVAR------MIFSGLEHMGDIPFKTVFFHG----LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RD    KMSK  G+ I    V+++ G+D++RF ++   +    D  F + K +S  N
Sbjct: 519 RDAQGRKMSKSLGNGIDPIEVIEKYGADALRFTLVTGNSPGN-DMRFTEEKLESSRN 574


>gi|254230241|ref|ZP_04923632.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937221|gb|EDN56088.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 628

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 107/324 (33%), Gaps = 40/324 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            V  + A   +  L +    +W+P      ++ M        I R     + I   +   
Sbjct: 113 FVSMDQAGLRAKALESIKNVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 172

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H      I  +   +  +G           +      D D+ + +  +  V  D  
Sbjct: 173 TAELHPNTLELIEKVAKLVEEKGI---QAWWDVDAAELLGADADQYEKVLDTLDVWFDS- 228

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
                  G   +   D      + E   ++  +Y+ GSD   G+ +     + A+ ++  
Sbjct: 229 -------GVTHFSVVDA-----REEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAP 276

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +    
Sbjct: 277 YKQVLTHGFVV---DGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS- 332

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ ++S +        AY R R+  R         + +    +++P E         + 
Sbjct: 333 DEILKRSAD--------AYRRIRNTSRFFLANLSGFNPE---TDIVPVEEMVALDRWAVG 381

Query: 500 VHLAEYPRVIENATIAQEPYKLAF 523
             LA    ++  A      + +  
Sbjct: 382 RALAAQEEIV-KAYEEYNTHGVTQ 404


>gi|330686226|gb|EGG97838.1| glutamate--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 484

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 98/301 (32%), Gaps = 48/301 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYGGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W   +   + D D   G Y       +   L  +   E   +   K     ++   +
Sbjct: 64  --KWLGLEWDESVDKDKGYGPYRQSERADIYNPLIKQLLEEDKAY---KCYMTEEELEAE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +I R ++     QH     E                    +G         PK KT 
Sbjct: 119 REAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPKDKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G 
Sbjct: 166 TFNDMVKGEISFDSNNMGDW---VIVKKDGVPTYN------FAVAIDDHYMEISDVIRGD 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++G
Sbjct: 217 DHVSNTPKQLMIYEAFGWEAPRFAHM-----SLIVNEERKKLSKRDGQILQFIEQYRDLG 271

Query: 419 S 419
            
Sbjct: 272 Y 272


>gi|260771783|ref|ZP_05880701.1| isoleucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260613075|gb|EEX38276.1| isoleucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 948

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 40/304 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           KW+P      ++ M        I R     + I   +     + H   P+ I  +   + 
Sbjct: 447 KWMPDWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNSPALIEKVAQLVE 506

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++G           +      D ++ + +  +  V  D         G   Y   D    
Sbjct: 507 QKGI---QAWWDVDTAELLGADAEQYEKVLDTLDVWFDS--------GVTHYAVVDT--- 552

Query: 342 KCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
             + E       +Y+ GSD   G+ +     + A+  K     VL    V    DG   K
Sbjct: 553 --RPEFNGAQADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRK 607

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY 
Sbjct: 608 MSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYR 658

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+  R       +L+      ++IP E         +   LA    +I  A      +
Sbjct: 659 RIRNTAR---FFLANLNGFNPATDMIPVEEMVALDRWAVGRALAAQQEII-KAYDEYNTH 714

Query: 520 KLAF 523
            +  
Sbjct: 715 AVVQ 718


>gi|269837640|ref|YP_003319868.1| valyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786903|gb|ACZ39046.1| valyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 894

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +             +   +        I     N TG +H+GH     V D L   
Sbjct: 15  APQEVEAHWYDWWDDRGYFTPRIEPGRKPFVIIMPPPNVTGELHMGHALFVTVEDILTR- 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                  L     W            LP   + G+  + V ++ 
Sbjct: 74  -------------------WHRMLGEPTLW------------LPGADHAGIAGQWVVEKE 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK+L  V D+ +      IR+ L+ L    D          G    +
Sbjct: 103 IAKEGLSRHDLGREKFLERVWDW-MDRYRGRIREQLRILGASCDWTRFRFTMDPGPSRAV 161

Query: 274 RDIIDNLARQGYVYEG 289
           R    +L  +G +Y G
Sbjct: 162 RTAFKHLYDKGLIYRG 177



 Score = 38.0 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 13/96 (13%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF      E G+D +I++  +        +      + E     +V     V   
Sbjct: 476 TEDLRYFYPGTVMETGYD-IIFLWVAR------MIFLGLEFMGE-VPFTHVYFHGTV--- 524

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           RD    +MSK  G+ +    +    GSD++RF ++ 
Sbjct: 525 RDEAGQRMSKTKGNVLDPTEITARYGSDALRFALIT 560


>gi|229542225|ref|ZP_04431285.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326645|gb|EEN92320.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 465

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 44/351 (12%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+   +AF GY+V    Y+++     + L  +   R ++
Sbjct: 29  CGPTVYNYIHIGNARPAIVFDTVRRYLAFRGYDV---NYVSNFTDVDDKLIKAAKERGEE 85

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               ++  +   +     +  +G   AD +     N             ++ A ++ + +
Sbjct: 86  VPALSERFIKSYF---EDIDALGCCHADAHPRVTENMD-----------AIIAFIEKLIE 131

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              A     D++     F   D   +    ID L        G       K     D   
Sbjct: 132 KGHAYESGGDVYYHTRSF--PDYGKLSHQSIDELKS------GARIEVGEKKEDALDF-- 181

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L   +       D P  K    +    + +A      ++   + I +           
Sbjct: 182 -ALWKAAKEGEISWDSPWGKGRPGWHIECSAMA------KKYLGDTIDIHAGGQDLTFPH 234

Query: 367 LE---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            E   A + A+++K          +   Y +    KMSK  G+ + +  +++      +R
Sbjct: 235 HENEIAQSEALTDKP----FARYWMHNGYINIDNEKMSKSLGNIVLVHDIIERHDPQVLR 290

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           F ML       +++    +        +  ++ +Y   +     + ++  D
Sbjct: 291 FFMLSVHYRHPINYSEELLANAKAG--LERIKTSYQNVKHRLESSANLAED 339


>gi|163750100|ref|ZP_02157343.1| valyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161330157|gb|EDQ01139.1| valyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 971

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQEWEEKGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +      +   +K++  + D+  ++   I +  L+ L    D          G   
Sbjct: 93  KLAAEEGKTRHDLGRDKFIDKIWDWKKESGGTITKQ-LRRLGASVDWDRERFTMDEGMSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLE 187


>gi|20808683|ref|NP_623854.1| glutamyl- and glutaminyl-tRNA synthetase [Thermoanaerobacter
           tengcongensis MB4]
 gi|30316247|sp|Q8R7T1|SYE2_THETN RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|20517320|gb|AAM25458.1| Glutamyl- and glutaminyl-tRNA synthetases [Thermoanaerobacter
           tengcongensis MB4]
          Length = 485

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 92/284 (32%), Gaps = 41/284 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTGP+H+G+ R A+     +       ++     ++ R             L    +
Sbjct: 9   APSPTGPIHIGNMRTALFNYLFSRSEGATFVLRIEDTDLERSS------KGFEELIFKEL 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P G Y       +    A K   E   +   +     ++      
Sbjct: 63  KWLGIEWDEGPDKPGPYGPYRQSERLEIYHRFAQKLIEEKKAY---RCYCTPEELEEDRK 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             I R ++   + +      E +             +   R+G         P  +  + 
Sbjct: 120 KAIERGEIPRYSGRCRYLTKEQE-------------ETFIREGRKPVIRFMVPDDEVIEF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH 
Sbjct: 167 EDMIKGKITIKSDTLGGDM--VIIKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               +   +  A+  +  +        V L       K+SKR G
Sbjct: 220 YNTPKQILIYKALGFEIPKFAH-----VPLILGPDRTKLSKRHG 258


>gi|327382286|gb|AEA53762.1| Valyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385481|gb|AEA56955.1| Valyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 880

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DHKAVEAGRYQEWLDEDVFKPSGDQKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRE 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 71  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   +K++  V ++      K I      + +  D         +G    +
Sbjct: 100 -RKEGISRYDLGRDKFVQKVWEWK-DEFAKTIHSQWAKMGLSLDYSRERFTLDKGLNEAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L +QG +Y G          +    D
Sbjct: 158 RKVFVELYKQGLIYRGEYIVNWDPQARTALSD 189



 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 100/308 (32%), Gaps = 66/308 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
            + G  Y G +  PK     + D D     F S      TM   D D P    D    Y 
Sbjct: 423 KQTGETYVG-MEAPKDIENWQQDPDVLDTWFSSALWPFSTMGWPDTDSP----DYKRYYP 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
              L             MI+        +            E+  +  ++      L RD
Sbjct: 478 TDTLVTGYDIIPFWVARMIF-----QGLHFT---------GERPFKYTLIHG----LMRD 519

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ I    V+++ G+D++R+ ++   K  +   F + +V+          
Sbjct: 520 EQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDTRFSYKQVEAAWNF----- 574

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +I R     F  ++     +   P  S FD S+  L    A+    I+  T
Sbjct: 575 ----INKIWNISR-----FVMMNLGDLEKPQQPDPSTFDLSDKWL---FAQLNETIKQVT 622

Query: 514 IAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLV 563
              E      +        LY+   +VF   +           +  ++ K     R+ L 
Sbjct: 623 DLSE-----RFEFGEMGRTLYNFTWNVFADWY----VEMSKEVLYGDDEKAKAAKRVNLA 673

Query: 564 HAVASIIN 571
           +A+  I+ 
Sbjct: 674 YALDQILR 681


>gi|254671606|emb|CBA09289.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 929

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|160946906|ref|ZP_02094109.1| hypothetical protein PEPMIC_00867 [Parvimonas micra ATCC 33270]
 gi|158447290|gb|EDP24285.1| hypothetical protein PEPMIC_00867 [Parvimonas micra ATCC 33270]
          Length = 482

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 77/417 (18%), Positives = 140/417 (33%), Gaps = 70/417 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  L  +      +  R  Y+  A   I  L  
Sbjct: 7   APSPTGYLHIGGLRTALYNYLYAKQNGGKFLLRI-----EDTDRTRYVEGA---IENLIH 58

Query: 180 SVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIV 233
            + W   +A        +  + E    G Y++    E  + +KY+ EL+           
Sbjct: 59  ELKWAGVEADEGVCLDENGKITEVGECGPYIQSERVEKGIYNKYAEELIE---------- 108

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + Y+        R D      + D  I   D   RG    I D    +A  G  Y   L 
Sbjct: 109 RGYAYYCFCSKERLDDVKNQQKADGKIPRYDGLCRGVS--IEDAKKRIA-NGESYVIRLK 165

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+++     D+ + ++   +    D  D+ L+K+DG  TY     A     +  G  ++
Sbjct: 166 LPENRDIVFEDVIKGKITINTN---DMDDQVLIKADGFPTYHF---AVVVDDHLMGITHI 219

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF-ITLR 411
             V G +      +   +  A+  +K          +    +    K+SKR  D  +   
Sbjct: 220 --VRGDEWISSTPKHIYLYEALGFEKPTFVH-----LPTVLNKSGKKLSKRNDDASVEDF 272

Query: 412 HVVDEVGSDSVRFMMLW----RKNSELL-------DFDFCKVKEQSKENPVFYVQYAYAR 460
            +   +    + ++ L       N E+L        F F +V   SK   VF V      
Sbjct: 273 RLKGYLPEALINYLALVGWSPESNEEILSLDEMVKQFSFDRV---SKSGGVFDVDKLDWV 329

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-----LAEYPRVIENA 512
                R+ +          +       + +     L+LI       ++  P ++E +
Sbjct: 330 NAQYIRKMEVSELAKLVKPYLVKAGFIKEDICEKRLELITKTFQESISRLPEIVEQS 386


>gi|307186752|gb|EFN72197.1| Methionyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 540

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 110/350 (31%), Gaps = 50/350 (14%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
               K     I +V+A P    H+GH   AV+ D +A      G++       ++ G +I
Sbjct: 11  TSQNKYITTPIFYVNAGP----HIGHLYSAVLADAVARYNTMLGHKTFFTTGTDEHGNKI 66

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKW 229
              A++      +   N      E           +++   K+  D          E   
Sbjct: 67  KVAAVAAGLPNLEYCTNISQQFKEMCDRFEVDYSRFIRTTEKQHYDAVHHFWKRLEERGH 126

Query: 230 LPIVK--------------DYSVQAMM----KIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           + + K              D  +        KII+   ++ N     +  E+++     +
Sbjct: 127 IYLGKYSGWYCVSDEAFLSDTELVEQRDPTGKIIKVSAQSGNTV--EWTEEENYKFRLSA 184

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQK--CDMDRKQLLFRSTMV------GDDVDRP 323
              D+   L  +  +   +     S+  ++  C  D      RS +        D+    
Sbjct: 185 FQDDLKHWLKDENTIKPALYHKMLSEWIEEGSCLQDLSITRIRSKVPWAMPSPCDESHSI 244

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKA 379
            +  D    Y  A L Y    ++  +   I V+G D    H  Y     A   A   +  
Sbjct: 245 YVWMDALINYLTA-LGYPDESFKEFWPPTIQVIGKDILKFHGVY---WPAFLIAAGLEPP 300

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  +               KMSK  G+ I+     ++   D +R+ +L  
Sbjct: 301 KTLLCHAHWTVD-----HQKMSKSKGNVISPFEAANDYSEDGLRYFILRE 345


>gi|295702276|ref|YP_003595351.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799935|gb|ADF37001.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 660

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 115/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A       QQ + +
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEKNVTPQQYVDD 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             S + E             +  D    + +   E +   IV+        KI    L+ 
Sbjct: 77  IVSGIKEL-----------WDKMDISYDDFIRTTEPRHKEIVE--------KIFARLLEQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVPDETYYTEHQLVDPIVENGKV---VGGKSPDSGHPVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           +   +G  VDR L   + + ++                    DLA  +  ++ G      
Sbjct: 175 K---MGKYVDRLLAFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGN 231

Query: 349 FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV              G+++   Y K   A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWIDALSNYITSLGYGTENDENYRKYWPANVHLVGKEIVRFHTIYWPIMLMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|258646150|ref|ZP_05733619.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403533|gb|EEW97080.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 951

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + AV+       VL         DG   KMSK  G+ +  +
Sbjct: 576 LYLEGSDQHRGWFHSSLLTSVAVNGCAPYKAVLTHGFTM---DGEGRKMSKSVGNVVAPQ 632

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++D+ G+D +R  +        +      VK  S           Y + R+ FR     
Sbjct: 633 DIIDKYGADVMRLWISSVDYQGDVRLSDKIVKSMSD---------VYRKIRNTFRYLLGN 683

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D           E E D     L+  L +  R +  A    E + +
Sbjct: 684 LYDFDPKTDSVAYGDME-ELDR--WALLR-LEQVKRTVLKAYEDYEFHVM 729


>gi|148243515|ref|YP_001228672.1| valyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851825|emb|CAK29319.1| Valyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 918

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 111/395 (28%), Gaps = 57/395 (14%)

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V  + +     +        F  E+W  + +D+        I   L     +   +    
Sbjct: 371 VKAEPLAARCREALDQAKPQFVPERWSKVYRDWLTDIRDWCISRQLW-WGHRIPAWFVIS 429

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +           ++     +    E       ++   + D D     F S +        
Sbjct: 430 ESDGRYTDTTPYVVARNEAEAL--EKARAQFGAEAQIEQDEDALDTWFSSGLWPFSTL-- 485

Query: 324 LLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
                G     AADL   Y       GFD +I+         V R+  +A A + K    
Sbjct: 486 -----GWPDQNAADLQRWYPTSLLVTGFD-IIFFW-------VARMTMMAGAFTGKTPFA 532

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +V +  LV   RD    KMSK AG+ I    ++D  G+D++RF ++        D     
Sbjct: 533 DVYIHGLV---RDENNRKMSKSAGNGIDPLLLIDRYGADALRFALVREVAGAGQDIRLDY 589

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            ++      V   +    +  +  R A             +         D + LQL   
Sbjct: 590 DRKSDTSGTVEASRNFANKLWNATRFALMNLGGETPASLGKP--------DPAALQLADR 641

Query: 502 --LAEYPRVIENATIAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQA 550
             L+   RV               Y        LY+ A +     +    +         
Sbjct: 642 WILSRLARVNRETAARYS-----SYGLGEAAKGLYEFAWNEVCDWYLELSKRRLNPGENP 696

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           +   L   R         ++   +     E    M
Sbjct: 697 SAEALADQR-----TARQVLAQVM-----EELQRM 721



 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 52/200 (26%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P            S   +  +    G   ++     N TG +H+GH     + DT+ 
Sbjct: 16  TYDPQATEARWQQAWESSGAFHPDPEAPGEPFSLVTPPPNVTGSLHMGHAFNTALIDTIV 75

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V         G    ++A+      Q     +  +                
Sbjct: 76  RFQRMQGKNVLCLP-----GTDHASIAVQTILEKQLKAEGSSKE---------------- 114

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L     +  ++  +I+   L+ L    D          G   
Sbjct: 115 -----------ELGREGFLERCWAWKGESGGRIVSQ-LRRLGFSVDWQRERFTLDAGCSQ 162

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            + +   +L  QG +Y G  
Sbjct: 163 AVIEAFVSLHEQGLIYRGEY 182


>gi|57157207|dbj|BAD83633.1| valyl tRNA synthetase [Entamoeba histolytica]
          Length = 483

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 63/238 (26%), Gaps = 39/238 (16%)

Query: 53  LSRPLGLDPLTIAE--LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-VSG 109
           L +    +   I E   I        +   V        N   SP Y+ +         G
Sbjct: 11  LGKTKKENKKQIKEKEEIKFNKTNKGEKKKVIEPMP---N-TYSPKYVEEGWYEWWEKEG 66

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
                     G K  +     N TG +H+GH     + DT+       G E      ++ 
Sbjct: 67  FFKPEYSSKSGKKFVMVIPPPNVTGKLHLGHALTNSIQDTIVRYHRMKGDETLWVPGVDH 126

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG     +      R                  GV    +G+E           F EE W
Sbjct: 127 AGIATQVVVEKKLMRE----------------QGVTRHDIGRE----------KFLEEVW 160

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                    +   K I + L+ L    D               +++       +G +Y
Sbjct: 161 K------WKEEYGKGICNQLRRLGSSLDWSREVFTMDEKRGEAVKEAFCRFYEKGLLY 212


>gi|332981922|ref|YP_004463363.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699600|gb|AEE96541.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 924

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 81/247 (32%), Gaps = 35/247 (14%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D    +     + EG + P     +   + D   + F S   G      L   D      
Sbjct: 496 DAWFAMDEADILPEGFVCPHCGGRSFTKEKDIMDVWFDS---GSSHAAVLETRD------ 546

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             DL +    Y  G+D           G+ +     + A   +     VL   +V    D
Sbjct: 547 --DLHWPANMYLEGYDQF--------RGWFQSSLLTSVATRGRAPYDEVLTHGMVV---D 593

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK  G+ +  + VV E G+D +R  +        +      +K+ S+       
Sbjct: 594 GEGRKMSKSLGNGVDPQDVVQEYGADILRLWVTSADYKNDMRISKSILKQLSE------- 646

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              Y + R+  R       D + D    + +P +   +     L+  L +  + +  A  
Sbjct: 647 --VYRKIRNTARFLMGNLYDFNPD---TDAMPYDELKEIDRWALMR-LHQLIQEVTEAYD 700

Query: 515 AQEPYKL 521
             E + +
Sbjct: 701 NYEYHVV 707


>gi|325133568|gb|EGC56230.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325206749|gb|ADZ02202.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 929

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|308070408|ref|YP_003872013.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305859687|gb|ADM71475.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 888

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 69/269 (25%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +      +    +      +     I     N TG +H+GH     + D + 
Sbjct: 15  TYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLHIGHALDFTLQDIII 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                                   LP   + G+  +   +
Sbjct: 75  RAKRMQGYDAL--------------------------------WLPGADHAGIATQTKVE 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++     +  I +  + +    D          G   
Sbjct: 103 QKLREEGLTRYDLGREKFLEKVWEWK-DLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSQ 161

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L ++G +Y G          +    D +            +  PL    G  
Sbjct: 162 AVREVFVKLYKKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFI 221

Query: 332 TYFAA-------DLAYFKCKYERGFDNMI 353
           T           D A      +  +  MI
Sbjct: 222 TVATTRPETMLGDTAVAVHPEDERYKQMI 250



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 79/220 (35%), Gaps = 41/220 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           W+  V+D+ +   +         +   +D    E      DP+ + +           Y 
Sbjct: 403 WIENVRDWCISRQLWWG----HRIPAWYDEETGEVIVSAEDPTTLPE-----------YA 447

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G                   L   ST+   +    L +      Y+  ++         G
Sbjct: 448 GRKLKQDEDVLDTWFSS--ALWPFSTLGWPEQTEDLKR------YYPTNV------LVTG 493

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D +IY         V R+   A   +E+    +VL+  LV   RD    KMSK  G+ +
Sbjct: 494 YD-IIYFW-------VSRMIFTALEFTEEIPFKDVLMHGLV---RDADGRKMSKSLGNGV 542

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
               V+D+ G+D++R+M+       + L F + +V++   
Sbjct: 543 DPLDVIDQYGTDAMRYMISTSSTPGQDLRFRWERVEQARN 582


>gi|307261981|ref|ZP_07543637.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306868312|gb|EFN00133.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 954

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPSENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQAGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDRERFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|228470058|ref|ZP_04054969.1| valyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308332|gb|EEK17181.1| valyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 887

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 61/220 (27%), Gaps = 34/220 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  ++        I     N TG +H+GH     + D L   
Sbjct: 15  DPAGVETKWYQYWLDHKLFEAHVDHSKKPYTIIMPPPNVTGVLHMGHMLNNTIQDILIRR 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +GY           G    ++A       Q A       + +             E 
Sbjct: 75  ARIAGYNACWVP-----GTDHASIATEAKVVDQLAKQG----IQKNQLTREDFLKHAWEW 125

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DKY   +L+                         L+ L +  D   +           +
Sbjct: 126 TDKYGGIILSQ------------------------LRRLGVSCDWSRTAFTLDEERSESV 161

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            ++   L  +G +Y G+         Q   +  ++++F+ 
Sbjct: 162 INVFCKLYEEGLIYRGVRVVNWDPKAQTA-LSDEEVIFKE 200


>gi|160878630|ref|YP_001557598.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427296|gb|ABX40859.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 892

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 53/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L    +    +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKDIEGRLYEKWLEKKYFHAEVDKTKKPFTIVIPPPNITGQLHMGHALDNTMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+               +  +++   +  +AL     D  +    G   +    
Sbjct: 68  RFKRMQGFNAL-------WQPGTDHASIATEVKIIEALKKEGIDKDQLGREGFLKR--AW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+Y   ++                          LK L    D          G   
Sbjct: 119 EWKDEYGGRIIGQ------------------------LKKLGSSCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   +  +G +Y+G
Sbjct: 155 AVEEVFVKMYEKGMIYKG 172



 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 94/250 (37%), Gaps = 36/250 (14%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+         ++ + +    ++EK  +  +       L 
Sbjct: 469 TEDLEYFYPTDVLVTGYD-IIFFW------VIRMIFSGYEQMNEKPFKTVLFHG----LV 517

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    ++++ G+D++RFM++   N+   D  F   + ++  N   
Sbjct: 518 RDSQGRKMSKSLGNGIDPLEIIEQYGADALRFMLITG-NATGNDMRFYMERVEAARNFAN 576

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-----HLAEYPR 507
            V  A        +Q ++   D   D    + +    ++  S++  +      HL ++  
Sbjct: 577 KVWNASRFIMMNMQQMEEAGMDAKVDSVDMSTLTDADKWIISKVNTLTKDVTEHLEKFD- 635

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +  A        +  ++++    F   +           +  +++        +     
Sbjct: 636 -LGIAAQK-----VYDFIWE---EFCDWY----IEMVKPRLYGDDQATKTA--AIYTL-R 679

Query: 568 SIINSGLNII 577
           ++++S L ++
Sbjct: 680 TVLDSALKLL 689


>gi|51894387|ref|YP_077078.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51858076|dbj|BAD42234.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 651

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 101/335 (30%), Gaps = 57/335 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D LA      G+E       ++ G +I   AL        A   
Sbjct: 13  PSSKLHIGHSYTTVAADALARYHRRLGHETYFLTGTDEHGQKIERAAL--------AEGK 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK-------- 243
                 +    G  +K +   L   Y  + +   EE+   +V+    Q   +        
Sbjct: 65  TPIQFVDEIVAG--IKELWAALHISY-DDFIRTTEERHKKVVQKIFKQLYDQGDIYKSSY 121

Query: 244 -----------IIRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLARQGYV- 286
                       I   LK  N+  D      +  ++ +          ++  +    ++ 
Sbjct: 122 EGWYCTPCETFWIESKLKEGNLCPDCGRPVEWTKDESYFFRLSKYADRLLRYIEETDFIQ 181

Query: 287 ---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFK 342
               +  +    ++  +   + R  + +   +  D+     +  D    Y +A       
Sbjct: 182 PASRKNEMISFINQGLEDLCVSRSTVRWGIPVPFDEKQTIYVWIDALSNYISALGWGTEN 241

Query: 343 CKYERGFDNMIYVMGSDHSG--------YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            +  R F        +D           +      +  A+     +    +     L   
Sbjct: 242 DELYRKF------WPADVHLVGKEIVRFHTIIWPCILMALGLPLPK---KVFGHGWLLFG 292

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ +    ++D  G D+VR+ +L  
Sbjct: 293 TQAEKMSKSKGNVVDPFVLIDRYGVDAVRYYLLRE 327


>gi|312898925|ref|ZP_07758313.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620087|gb|EFQ03659.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 887

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 58/198 (29%), Gaps = 36/198 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +             + ++        +I     N TG +H+GH     + D L   
Sbjct: 12  NPGEIEAKWYDFWEKEGYFHQDPDSSREPYSIVMPPPNVTGQLHMGHALDNTLQDILIRF 71

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
              SGY V      + AG   Q+                                  V +
Sbjct: 72  KRMSGYNVVWIPGTDHAGIATQV---------------------------------KVEE 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +      +   E++L  V  +  +     I   ++ L    D              
Sbjct: 99  QLAKEEGKTRYDIGREEFLKRVWAWK-EKYGNRIEQQVRRLGSSCDWSRKRFTMDDICAR 157

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R++   L  +G +Y+G
Sbjct: 158 AVREVFVALYEKGLIYQG 175



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 83/239 (34%), Gaps = 45/239 (18%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   +        + A    + E   +   +      L RD    KMSK  G+
Sbjct: 488 TGYD-IIFFWVAR------MMFATCEFMKEVPFKDVFIHG----LVRDSQGRKMSKSLGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    V D  G+D++RF ++        D  F   + ++  N    +            
Sbjct: 537 GIDPLEVSDMYGADALRFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------ 583

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                F  ++ + +    +P   +F  ++  +   L  + +V+   T   +        Y
Sbjct: 584 WNASKFVIMNLEDYDPEFVPTTDDFTLADRWI---LTSFNQVVRQVTKGLD-------SY 633

Query: 527 DL----ASVF----HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +L    A+V+    +       E  + R  ++++++           V  ++   L ++
Sbjct: 634 ELGDAAATVYDFTWNSFCDWYIELAKQRLYKSDDKRSRQT--AQYVLVR-VLTGALALL 689


>gi|255076041|ref|XP_002501695.1| predicted protein [Micromonas sp. RCC299]
 gi|226516959|gb|ACO62953.1| predicted protein [Micromonas sp. RCC299]
          Length = 1060

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 54/196 (27%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +             +   +     K  I     N TG +H+GH     + DT+   
Sbjct: 100 DPKNVEAAWYDWWEKEGYFKPTMGTSKPKFVIVIPPPNVTGALHIGHALTNSIQDTIVRW 159

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGYE       + AG    T+                               V K+L
Sbjct: 160 RRMSGYEALWVPGTDHAGIATQTV-------------------------------VEKKL 188

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++  Q   KI    LK L    D               +
Sbjct: 189 QREEGITRHDLGREKFLERVFEWKEQYGGKIFNQ-LKRLGSSLDWSRERFTMDEMLSKAV 247

Query: 274 RDIIDNLARQGYVYEG 289
           ++    +   G VY  
Sbjct: 248 KEAFVRMHADGLVYRD 263


>gi|262066120|ref|ZP_06025732.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380215|gb|EFE87733.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 887

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 83/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +           +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKTWEESKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEEGKKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           + I ++L   G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 KKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEFGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNDDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|313906147|ref|ZP_07839496.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469034|gb|EFR64387.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 662

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 115/392 (29%), Gaps = 61/392 (15%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
                      I + S  P    H+G+    V+ D++A      GY V  +   ++ G +
Sbjct: 4   HTNENYYMTTAIAYASGKP----HIGNTYEIVLADSIARFRRMQGYNVFFQTGTDEHGQK 59

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           I   A       +Q + N   ++         +  +     DK+     ++ E +   + 
Sbjct: 60  IENKATEAGVTPKQYVDNTAGEI-------RRIWDLMNTSYDKFIRTTDDYHEAQVQKMF 112

Query: 234 KDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           K    +    I     +       + F +E     G        +       Y +     
Sbjct: 113 KKMFDKG--DIYLGSYEGWYCTPCESFWTESQLVDGKCPDCGREVTKANEPAYFFRMSKY 170

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---- 348
             K         D  Q + R   + ++   P             DL   +  ++ G    
Sbjct: 171 AQKLIDHINSHPDFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVD 220

Query: 349 FD--NMIYVM---------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVR 390
           FD  +++YV                  +H+    +   A    + +   + + +   +  
Sbjct: 221 FDPKHVVYVWLDALTNYITGIGYDCDGNHTEQFGKFWPADLHLIGKDIIRFHTIYWPIFL 280

Query: 391 LYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELL 435
           +  D                  KMSK  G+ I    +VD  G D+VR+ +L         
Sbjct: 281 MSLDLPLPKQVFGHPWLIQADGKMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDG 340

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
              +  + E+   +    +     R  S+  +
Sbjct: 341 VISWDLMVERMNSDLANTLGNLVNRTISMSNK 372


>gi|259500938|ref|ZP_05743840.1| glutamate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|309808508|ref|ZP_07702407.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325912382|ref|ZP_08174777.1| glutamate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920484|ref|ZP_08277216.1| glutamate--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167632|gb|EEW52127.1| glutamate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308168336|gb|EFO70455.1| glutamate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325475724|gb|EGC78895.1| glutamate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936160|gb|EGG32613.1| glutamate--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 501

 Score = 51.1 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 106/308 (34%), Gaps = 37/308 (12%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
              K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + +
Sbjct: 4   AKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSKS 61

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G   G Y +   K++ +KY  +LL+         
Sbjct: 62  QMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----KA 108

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              Y+    ++  R++ +A+ I         ++       I+        +G      + 
Sbjct: 109 YYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRIH 165

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     +
Sbjct: 166 IPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMEI 217

Query: 353 IYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +V+ G DH     +   V  A +    +       +  +       K+SKR    +   
Sbjct: 218 THVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQFI 273

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 274 EQYRDLGY 281


>gi|306821058|ref|ZP_07454676.1| glutamate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550894|gb|EFM38867.1| glutamate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 492

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 99/292 (33%), Gaps = 38/292 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA----QINTLALSVFWR 184
           + +PTG +H+G  R A+  + L S     G +        D        I ++  S+ W 
Sbjct: 8   APSPTGFVHIGSLRTALY-NFLYS--KKMGGKYILRVEDTDRNRLVEGAIESMLKSLKWG 64

Query: 185 ----YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                +    + D  + +    G Y++    ++  KY   L+      +        ++ 
Sbjct: 65  GISSDEGVCIDEDEKIIQIGEAGPYIQSERLDIYKKYIDVLVEKG-HAYYCFCTKERLEN 123

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTT 299
           + +  +               ED  + G    + ++ +      G  Y   L  P++   
Sbjct: 124 LREEQKSR------------GEDTKYDGHCKSLSKEEVQKRIEAGEEYVIRLKMPENTDI 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R +++  S  +    D+ L+KSDG  TY     A     +  G  ++I   G +
Sbjct: 172 AFDDVVRGRVVINSDTID---DQVLMKSDGFPTYHF---AVVVDDHLMGITHIIR--GEE 223

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                 +   +      +K     L   L     +    K+SKR GD     
Sbjct: 224 WLTSTPKHVLMYEMFGWEKPTFVHLPNIL-----NSDKKKLSKRQGDVAVED 270


>gi|223984583|ref|ZP_03634710.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
 gi|223963430|gb|EEF67815.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
          Length = 889

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 35/191 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   + +  G     +       + I     N TG +H+GH     + D +A      G
Sbjct: 35  EQGYDNWIKEGYFTAGDQSKDPFCIVI--PPPNVTGKLHLGHAWDTTLQDIIARYKRMQG 92

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y++            ++   ++   +  + L                          K  
Sbjct: 93  YDML-------WVPGMDHAGIATQAKVDERL-------------------------KKEG 120

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L    D+  +     IR     + +  D          G    +  +  
Sbjct: 121 VSRYDLGREKFLERAWDWK-EEYAGHIRQQWAKMGLSLDYTRERFTLDEGLSKAVAKVFV 179

Query: 279 NLARQGYVYEG 289
           +    G +Y+G
Sbjct: 180 DYYNDGLIYQG 190



 Score = 37.2 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 80/240 (33%), Gaps = 44/240 (18%)

Query: 281 ARQGYVYEGILPP-PKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              G +Y G   P       Q  D+        L   ST+   D    L +      Y+ 
Sbjct: 440 KETGEIYVGTEAPQDLENWNQDEDVLDTWFSSALWPFSTLGWPDKTPDLER------YYP 493

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            D+         G+D +I+         V R+   A   ++ +   +VL+  L+   RD 
Sbjct: 494 NDV------LVTGYD-IIFFW-------VARMAFQARYFTKSRPFKDVLIHGLI---RDA 536

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +    V+ + G DS+RF +           D   ++E+ + +  F  +
Sbjct: 537 QGRKMSKSLGNGVDPMDVIAKHGVDSLRFFLTTNSTPGQ---DMRYIEEKLEASWNFINK 593

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
              A  R +     + F   D DL   ++                 L      I + T  
Sbjct: 594 IWNAS-RFVMMNMPEDFTLEDIDLSTLSITDTWI------------LNRLNETIASVTAN 640


>gi|303247249|ref|ZP_07333523.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491408|gb|EFL51296.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 940

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 75/204 (36%), Gaps = 26/204 (12%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  + + E  F   +Y+ GSD   G+       + A         VL    V    DG  
Sbjct: 551 AVLEKRPELAFPANLYLEGSDQHRGWFHSSLLASLATRGTPPYRQVLTHGYVV---DGEG 607

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I  + ++D+ G++ +R         + +      +    +         A
Sbjct: 608 RKMSKSLGNGIEPQEIIDKHGAEILRLWTSAVDYRDDIRLSEEILSRLVE---------A 658

Query: 458 YARCRSIFRQAKDIFPDLDF---DLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENAT 513
           Y R R+  R       D D    D+ P++++P +S   DT+              I  A 
Sbjct: 659 YRRIRNTCRFVLGNLSDFDPAVNDVAPQSMLPLDSYAVDTAARAHAR--------IAEAY 710

Query: 514 IAQEPYKLAFYLYDLA-SVFHGHW 536
            A E +K+   L++L  +     +
Sbjct: 711 EAYEFHKVFHALHNLCVTDLSAFY 734


>gi|325982822|ref|YP_004295224.1| valyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532341|gb|ADZ27062.1| valyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 920

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 68/238 (28%), Gaps = 33/238 (13%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            +P ++  +  S   S   +        +   I     N TG +H+GH     + D L  
Sbjct: 7   FNPKHIENLWYSQWESAGYFKPAADENRSAYCIMLPPPNVTGTLHMGHAFQHTLMDALTR 66

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GY                             L+   +D        V  + + ++
Sbjct: 67  YHRMRGYNT---------------------------LWQPGTDHAGIATQIVVERQLDQQ 99

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
              +       F E  W    K+ S   + + +R     +    D          G    
Sbjct: 100 NLKRQQMGRETFLERVWQ--WKEESGSTITRQMR----RMGTSCDWTRERFTMDDGLSRA 153

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + ++   L R+G +Y G          Q    D + +          +  PL ++DGS
Sbjct: 154 VTEVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLEVVATEENGWLWHIRYPLEQADGS 211


>gi|239631662|ref|ZP_04674693.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526127|gb|EEQ65128.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 883

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 14  DHKAVEAGRYQEWLDEDVFKPSGDQKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRE 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 74  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   +K++  V ++      K I      + +  D         +G    +
Sbjct: 103 -RKEGISRYDLGRDKFVQKVWEWK-DEFAKTIHSQWAKMGLSLDYSRERFTLDKGLNEAV 160

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L +QG +Y G          +    D
Sbjct: 161 RKVFVELYKQGLIYRGEYIVNWDPQARTALSD 192



 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 100/308 (32%), Gaps = 66/308 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
            + G  Y G +  PK     + D D     F S      TM   D D P    D    Y 
Sbjct: 426 KQTGETYVG-MEAPKDIENWQQDPDVLDTWFSSALWPFSTMGWPDTDSP----DYKRYYP 480

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
              L             MI+        +            E+  +  ++      L RD
Sbjct: 481 TDTLVTGYDIIPFWVARMIF-----QGLHFT---------GERPFKYTLIHG----LMRD 522

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ I    V+++ G+D++R+ ++   K  +   F + +V+          
Sbjct: 523 EQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDTRFSYKQVEAAWNF----- 577

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +I R     F  ++     +   P  S FD S+  L    A+    I+  T
Sbjct: 578 ----INKIWNISR-----FVMMNLGDLEKPQQPDPSTFDLSDKWL---FAQLNETIKQVT 625

Query: 514 IAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLV 563
              E      +        LY+   +VF   +           +  ++ K     R+ L 
Sbjct: 626 DLSE-----RFEFGEMGRTLYNFTWNVFADWY----VEMSKEVLYGDDEKAKAAKRVNLA 676

Query: 564 HAVASIIN 571
           +A+  I+ 
Sbjct: 677 YALDQILR 684


>gi|116494743|ref|YP_806477.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191638254|ref|YP_001987420.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|301066302|ref|YP_003788325.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116104893|gb|ABJ70035.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712556|emb|CAQ66562.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|300438709|gb|ADK18475.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 880

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DHKAVEAGRYQEWLDEDVFKPSGDQKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRE 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 71  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   +K++  V ++      K I      + +  D         +G    +
Sbjct: 100 -RKEGISRYDLGRDKFVQKVWEWK-DEFAKTIHSQWAKMGLSLDYSRERFTLDKGLNEAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L +QG +Y G          +    D
Sbjct: 158 RKVFVELYKQGLIYRGEYIVNWDPQARTALSD 189



 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 100/308 (32%), Gaps = 66/308 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
            + G  Y G +  PK     + D D     F S      TM   D D P    D    Y 
Sbjct: 423 KQTGETYVG-MEAPKDIENWQQDPDVLDTWFSSALWPFSTMGWPDTDSP----DYKRYYP 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
              L             MI+        +            E+  +  ++      L RD
Sbjct: 478 TDTLVTGYDIIPFWVARMIF-----QGLHFT---------GERPFKYTLIHG----LMRD 519

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ I    V+++ G+D++R+ ++   K  +   F + +V+          
Sbjct: 520 EQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDTRFSYKQVEAAWNF----- 574

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +I R     F  ++     +   P  S FD S+  L    A+    I+  T
Sbjct: 575 ----INKIWNISR-----FVMMNLGDLEKPQQPDPSTFDLSDKWL---FAQLNETIKQVT 622

Query: 514 IAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLV 563
              E      +        LY+   +VF   +           +  ++ K     R+ L 
Sbjct: 623 DLSE-----RFEFGEMGRTLYNFTWNVFADWY----VEMSKEVLYGDDEKAKAAKRVNLA 673

Query: 564 HAVASIIN 571
           +A+  I+ 
Sbjct: 674 YALDQILR 681


>gi|282850551|ref|ZP_06259930.1| valine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580044|gb|EFB85448.1| valine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 885

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWNRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  + +
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEDN 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVVVATTRPETMFGDVAVAVNPDDDRYKDLI 246



 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+D+ G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGHKMSKSLGNGINPLEVIDQYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P   +   S+  ++     Y   +++ T   
Sbjct: 598 SFVPTADDLTLSDQWIVQK---YNETVQSVTSNL 628


>gi|260437219|ref|ZP_05791035.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810532|gb|EFF69737.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 877

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L     +   +   +        I     N TG +H+GH     + D L   
Sbjct: 9   NPAEIESRLYEKWENKKYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ + KE 
Sbjct: 69  KRMQGYS---------------------------ALWVPGTDHASIATEAKVVEKIAKEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK+L  V D+  +   +I++  LK +    D          G    +
Sbjct: 102 LTKE-----SLGREKFLDRVWDWKKEYGGRIVKQ-LKKIGSSADWDRERFTMDEGCNKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
           +++  NL  +G +Y G
Sbjct: 156 KEVFVNLYNKGLIYRG 171


>gi|163791284|ref|ZP_02185698.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873425|gb|EDP67515.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 877

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 54/207 (26%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V  G+        K     +     N TG +H+GH     + D +       G
Sbjct: 14  AGRYDKWVEKGLFKPSGDKTKEPYSVV-IPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+             ++   ++   + +  L                          +  
Sbjct: 73  YDTL-------WLPGMDHAGIATQAKVEAKL-------------------------AEDG 100

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK++  V D+  +    +IR+    + I  D          G    +R +  
Sbjct: 101 ISRYDLGREKFIDTVWDWK-EEYASVIREQWAKVGISVDYSRERFTLDDGLSEAVRKVFV 159

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +  +Y G          +    D
Sbjct: 160 TMYNKKLIYRGEYIINWDPKAKTALSD 186



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+++ G+D++R+ +       + + F + K+       
Sbjct: 512 LIRDTEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDA----- 566

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  A+     I       F  ++ + F  + I    E   ++  ++  L      +
Sbjct: 567 -------AWNFINKI--WNASRFALMNMEDFTVDQIDLTGEKTVADRWILTKL---NETV 614

Query: 510 ENATIAQE 517
           E  T   E
Sbjct: 615 EKVTDLFE 622


>gi|154685959|ref|YP_001421120.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154351810|gb|ABS73889.1| IleS [Bacillus amyloliquefaciens FZB42]
          Length = 921

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 127/391 (32%), Gaps = 79/391 (20%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  S  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRSDLLDAIKETKWVPEWGEQRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                   +  + EG   P     T   + D   + F 
Sbjct: 470 GEPIITDETIEHVSELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVA 371
           S   G      L + D        DL        R  D  +Y+ GSD   G+     + A
Sbjct: 530 S---GSSHQAVLEERD--------DLV-------RPAD--LYLEGSDQYRGWFNSSLSTA 569

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            AV+ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +     
Sbjct: 570 VAVTGKAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSVDY 626

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +      +K+ ++          Y + R+ FR       D +  +   +V     E 
Sbjct: 627 QADVRVSDAILKQVAE---------VYRKVRNTFRFLHGNLFDFNPSVNAVDVKDL-REV 676

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEP----YKLAFYL-YDLASVFHGHWSHGRENPRLR 546
           D     +++ L +    ++ A    E     + +  +   +L       +        + 
Sbjct: 677 DQY---MLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIEL----SSFYLDF-AKDVVY 728

Query: 547 FVQANNRKLT-------MMRLQLVHAVASII 570
              A++              L LV   A I+
Sbjct: 729 IEHADHPDRRSMQTVFYETLLALVKLTAPIL 759


>gi|330837436|ref|YP_004412077.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329749339|gb|AEC02695.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 884

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 62/197 (31%), Gaps = 35/197 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I  +    G+   +++   G    I     N TG +H+GH     + DT+    
Sbjct: 13  KDFEDRIYEAWRRDGLFKPQDVP--GKPFTIVMPPPNVTGILHMGHALNNSLSDTIIRYQ 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SG                           ++AL+   +D        V  + + KE  
Sbjct: 71  RMSG---------------------------RKALWVPGTDHAGIATQNVVERQLAKEGL 103

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++      F E  W    K +SV      I   L+ +    D          G    +R
Sbjct: 104 SRHDLGREKFLERTWQVKKKHHSV------IVKQLEKIGCSCDWEHERFTMDEGLSRAVR 157

Query: 275 DIIDNLARQGYVYEGIL 291
           +    L  +G +Y+G  
Sbjct: 158 EAFVTLYERGLIYKGKY 174


>gi|227544734|ref|ZP_03974783.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909020|ref|ZP_07126483.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185274|gb|EEI65345.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894427|gb|EFK87785.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 675

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 132/435 (30%), Gaps = 75/435 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      GY+V   +Y+   G              +  L  
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFKRLRGYDV---FYL--TGT------------DEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++ + +    L    +K++    DY  +A+ KI +  L  
Sbjct: 60  EQKAEKLGMKPQEYVDQMAAQIKELWKK--LEITNDKFIRTTDDYHEKAVQKIFQQLLDQ 117

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I    +  + S DD      S + ++  +       G    G       + +    M 
Sbjct: 118 GDIYKGKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMS 177

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLA------YFKCKYERGFDNMIY 354
           +      +         +   R     +        DLA       +  K      +++Y
Sbjct: 178 KYADWLMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFAWGVKVPNDPKHVVY 237

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQIN-----------------V 383
           V              GSD     K+   A    V ++  + +                  
Sbjct: 238 VWIDALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKH 297

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
           ++       RDG   KMSK  G+ I    +VD  G D+ R+ +L          F     
Sbjct: 298 VIGHGWLTMRDG---KMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDF 354

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++   +    +     R  ++  + ++   +  +     F  ++    S+      +L+
Sbjct: 355 VDKVNYDLANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELM 414

Query: 500 VHLAEYPRVIENATI 514
                +   +     
Sbjct: 415 DK-TRFAEALAAVWK 428


>gi|241999940|ref|XP_002434613.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215497943|gb|EEC07437.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 536

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 36/160 (22%)

Query: 448 ENPVFYVQYAYARCRSIFRQ-----------AKDIFPDLDFDLFPRNVIPQESEFDTSE- 495
           EN  + +QY  AR  ++  +           A     + DF L   N+ P+   +     
Sbjct: 391 ENGHYSLQYTAARIAAVLEKYELAVNEGAYPALCKLEEADFSLL--NLQPEWMLWHRLSI 448

Query: 496 -LQLIVHLAEYPRVIENATIAQEP-------YKLAFYLYDLASVFHGHWSHGRENPRLRF 547
             +L++  +  P  +        P       + L   L  L S F  ++S  R       
Sbjct: 449 CWRLLLEPS--PATL-----HGNPIKVEVNAHALCKALEGLGSEFSAYYSKVRIL----- 496

Query: 548 VQANNRKLTM--MRLQLVHAVASIINSGLNIIGVESPNEM 585
           VQ     L     RL L+ AV   +   L   G+ + N+M
Sbjct: 497 VQPEQHLLKTLCARLWLLKAVQKTLQRILRRFGLTTLNKM 536


>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 472

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 113/348 (32%), Gaps = 40/348 (11%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + + +    E  + L  K  K+ +           H+GH R A+V D +     + GY V
Sbjct: 4   VFNTLTEKKEEFKPLNDKTVKMYV--CGPTVYDHAHIGHARSAIVFDVIRRWFEYRGYRV 61

Query: 162 T-REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
                Y  D   +I                + +  +P       Y++   +++      E
Sbjct: 62  IYVRNYT-DVDDKIIK-------------RSKEEGIPWYEVAKKYIESYEEDMKALNIKE 107

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
               P+           ++ ++        A   + D++ S + F        R   + +
Sbjct: 108 PTYKPKVTEHIEEIIEMIKGLIAKGY----AYESEGDVYFSVEKFSEYGKLSKRKTEELI 163

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A       G    P  K     D     L  +S       + P       +    + +A 
Sbjct: 164 A-------GARIEPGEKKKNPLDF---ALWKKSKEGEPGWESPWGIGRPGWHIECSAMAM 213

Query: 341 -FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            +  +        + ++   H   + + EA        K+ +   L     +       K
Sbjct: 214 KYLGRTMDIHGGGLDLIFPHHENEIAQSEAY-----TGKSFVRYWLHNGFVMVN---KEK 265

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           MSK  G+F T++ ++ E  SD +R  +L       +DF F ++K+  +
Sbjct: 266 MSKSLGNFFTIKDILKEFSSDVLRLFLLSTHYRSPIDFSFERLKDAER 313


>gi|163742786|ref|ZP_02150171.1| glutamyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161384041|gb|EDQ08425.1| glutamyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 466

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 93/296 (31%), Gaps = 53/296 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQIN 175
           K  +   + +PTG +H+G  R A+     A       L+     +  R            
Sbjct: 3   KPVVTRFAPSPTGYLHIGGARTALFNWLYARGRGGKFLLRIEDTDRERSNP--------- 53

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               ++         ++D ++   +        V +EL  +       F  ++ +   +D
Sbjct: 54  EATAAILQGMAWLGLDHDGEVVSQFEGAERHAAVARELL-EAGKAYKCFATQEEIATFRD 112

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +        +  L     +H      D  H   P  IR                +  P+
Sbjct: 113 QAKAEG----KSTLYRSPWRHAD----DSSHPDAPYVIR----------------IKAPQ 148

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
             TT   D  +  +  ++  +    D  LL+SDG+  Y    LA     ++ G  ++I  
Sbjct: 149 DGTTVIRDEVQGDVTIKNAQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR- 201

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            G DH     R   +  A+        V +   + L       K+SKR G      
Sbjct: 202 -GDDHLNNAARQMMIYEAMGWD-----VPVWAHIPLIHGADGKKLSKRHGALGAQE 251


>gi|296444651|ref|ZP_06886615.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257919|gb|EFH04982.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 904

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 65/248 (26%), Gaps = 37/248 (14%)

Query: 92  YLSPSYLRKILSSIVVS--GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +  +  +      GR         +I     N TG +H+GH     + D 
Sbjct: 4   TFDPAAIESRMRELWEATGAFRAGRPERAGAEPFSIVIPPPNVTGSLHMGHALNNTLQDI 63

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA      G +V  +   + AG     +        QQ                      
Sbjct: 64  LARYQRMRGRDVLWQPGTDHAGIATQMVVERKLMERQQ---------------------- 101

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                            EK+L  V  +  ++   +I + LK L    D          G 
Sbjct: 102 ----------HRRELGREKFLEEVWAWKAESG-GVIVEQLKRLGASCDWSRERFTLDEGL 150

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +   L R G +Y+                D +               P++  DG
Sbjct: 151 SRAVAKVFVQLHRDGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGHLWHFRYPIVYQDG 210

Query: 330 SYT--YFA 335
             T  Y  
Sbjct: 211 QPTGDYIT 218



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     ++    +V +  LV   RD    KMSK  G+
Sbjct: 509 TGFD-IIFFW-------VARMMMMGLYFKKEVPFHDVYIHALV---RDEKGAKMSKSKGN 557

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   H++++ G+D++RF +
Sbjct: 558 VIDPLHLINDYGADALRFTL 577


>gi|294794041|ref|ZP_06759178.1| valine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455611|gb|EFG23983.1| valine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 885

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 44/272 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +     S   +   +   +       +I     N TG +H+GH     + D L 
Sbjct: 9   TYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 GY V      + AG   QI                                  V
Sbjct: 69  RFKRMQGYNVLWMPGTDHAGIATQI---------------------------------KV 95

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA +      +   EK++  V ++  +    I++  +++L    D          G 
Sbjct: 96  EEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQ-IRSLGASCDWNRERFTLDEGY 154

Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
              +R++  +L  +G +Y G              S    + + +   L      V  + +
Sbjct: 155 YHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGEDN 214

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           R ++ +         D+A      +  + ++I
Sbjct: 215 RFVVVATTRPETMFGDVAVAVNPDDDRYKDLI 246



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 17/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +  A+  +  +I      +  L RD    KMSK  G+ I    V+D+ G+D++
Sbjct: 492 FFWVARMIFMALEFEH-EIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F   + ++  N    +                 F  ++   +  
Sbjct: 551 RFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------WNASKFVLMNLTNYDE 597

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           + +P   +   ++  ++     Y   +++ T   
Sbjct: 598 SFVPTADDLTLADQWIVQK---YNETVQSVTSNL 628


>gi|256028619|ref|ZP_05442453.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766537|ref|ZP_06525915.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718092|gb|EFD82104.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 887

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 86/267 (32%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEDGLKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R I ++L R G +Y+G                 +   +++   L++      D D  ++ 
Sbjct: 156 RKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHVEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATSRPETMLGDVAVAVHPEDERYKHLI 242



 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 108/358 (30%), Gaps = 69/358 (19%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +               +F+            + ++      + +   
Sbjct: 394 WLENIRDWCISRQIWWGHRIPAWYGPDKHVFV-----------AMDEVEAKEQAKKHYGH 442

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    +             L   STM   +  + L            DL Y       G
Sbjct: 443 DVELSQEEDVLDTWFSS--ALWPFSTMGWPEKTKEL------------DLFYPTSTLVTG 488

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +I+   +           +      KK     +    +   RD +  KMSK  G+  
Sbjct: 489 AD-IIFFWVAR--------MIMFGMYELKKIPFKNVFFHGI--VRDEIGRKMSKSLGNSP 537

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               ++ E G D++RF M++   S+  D  F         N    +  A           
Sbjct: 538 DPLDLIKEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRNFANKIWNAARFVIMNLESF 596

Query: 469 KDIFPD---LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
                D   LD++L  + +I + +E           L ++   ++NA  A         +
Sbjct: 597 DVKSVDKTKLDYELVDKWIISRLNETAKDVKD---CLEKFE--LDNAAKA---------V 642

Query: 526 YD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           Y+ L   F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 643 YEFLRGDFCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|325963761|ref|YP_004241667.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469848|gb|ADX73533.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 520

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 104/324 (32%), Gaps = 32/324 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      GY+V      ++ G +I   A       ++ +  
Sbjct: 18  PNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQTAEKEGITPKELVDR 77

Query: 192 NDSDLPEGY--YPGVYLKHVGKELADKYSSE---LLNFPE---------EKWLPIVKDYS 237
           N       +      Y + +    AD Y++                   E W  +  +  
Sbjct: 78  NAEVYKAAHAALGITYDRFIRTTDADHYAASQAIWKKMEANGDIYLSKYEGWYSVRDEAF 137

Query: 238 VQAMMKIIRDDLKALNIQHDI---FISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
                 +++DD    + + D    + +E+ +     +    ++     Q           
Sbjct: 138 YGEDDTVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQEKLLALYEAQPEFGAPQYRFN 197

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKY 345
            +     +  +   + R    +   + G+D     +  D    Y       D+   K + 
Sbjct: 198 EVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGVGYPDVDSEKFRK 257

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               D  ++++G D    + R  A+        A + +    ++  +     +KMSK  G
Sbjct: 258 YWPAD--VHIIGKD----ISRFHAIYWPAFLMSAGLELPKRVMIHGFLHNNGVKMSKSLG 311

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +     V + G D VR+  L  
Sbjct: 312 NVVAPADFVAQYGLDQVRYFFLRE 335


>gi|323136665|ref|ZP_08071746.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397982|gb|EFY00503.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 905

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 62/220 (28%), Gaps = 34/220 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P  +   + +       +  GR         +I     N TG +H+GH     + D 
Sbjct: 6   TFDPRSIESRIRTTWEDAQAFRAGRPERAGAAPYSIVIPPPNVTGSLHMGHALNNTLQDI 65

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 66  LVRYHRMKGEDVLWQPGTDHAGIATQMV-------------------------------V 94

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L ++          EK+L  V ++  ++  K I + LK L    D          G 
Sbjct: 95  ERQLMERQEPGRREMGREKFLERVWEWKAESGGK-IVEQLKRLGASCDWSRERFTLDEGL 153

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              +  +   L R G +Y+                D + L
Sbjct: 154 SRAVAKVFVQLYRDGLLYKDKRLVNWDPVLHTAISDLEVL 193



 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     ++    +V +  LV   RD    KMSK  G+
Sbjct: 512 TGFD-IIFFW-------VARMMMMGLHFKKEIPFKDVYIHALV---RDEKGAKMSKSKGN 560

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   H++DE G+D++RF +
Sbjct: 561 VIDPLHLIDEYGADALRFTL 580


>gi|325204795|gb|ADZ00249.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 929

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|317495634|ref|ZP_07954001.1| methionyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914253|gb|EFV35732.1| methionyl-tRNA synthetase [Gemella moribillum M424]
          Length = 665

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 105/343 (30%), Gaps = 63/343 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D L      SG++       ++ G +I   A       QQ + +
Sbjct: 15  PSGNLHIGHAYTTVACDALTRYKKLSGFDTYFLTGTDEHGQKIQQKAQEKGVSEQQYVDD 74

Query: 192 NDSDLPE----------------GYYPGVYLKHVGKELADK------YSSELLNFPEEKW 229
              D+ +                  Y    +  + + L +K            +  +E++
Sbjct: 75  MIKDIKKLWSAMDIDYSKFIRTTDGYHERAVAEIFERLVEKGDIYLGEYKGWYSISDEEY 134

Query: 230 L------PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN---- 279
                   + +D     +  I      A +      +SE+ +          ++      
Sbjct: 135 FTETQLQEVFRDEDGNMIGGI------APSGNEVKLVSEECYFFKMSKYADRLVKYYDEH 188

Query: 280 ------LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
                  +R+  +    + P               +  +S           +  D    Y
Sbjct: 189 PEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSN----PKHVVYVWIDALVNY 244

Query: 334 FAADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLC 386
             A L Y   + E  F+      + V+G +    + R   +      ++        +  
Sbjct: 245 ITA-LGYATGESEELFNKYWPADVQVVGKE----IVRFHVIYWPILLMALDLPLPKKIFA 299

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               L +DG   KMSK  G+ +    +++  G D+ R+ +L  
Sbjct: 300 HGWLLMKDG---KMSKSKGNVVDPYMLIERYGLDAARYYLLRE 339


>gi|293375365|ref|ZP_06621646.1| glutamate--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325844413|ref|ZP_08168140.1| glutamate--tRNA ligase [Turicibacter sp. HGF1]
 gi|292645918|gb|EFF63947.1| glutamate--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489087|gb|EGC91471.1| glutamate--tRNA ligase [Turicibacter sp. HGF1]
          Length = 478

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 99/291 (34%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     ++ R        +Q+N      F
Sbjct: 8   APSPTGFLHIGNARSALYNYLFAKHYGGDFILRIEDTDLER-NVEGGEESQMN------F 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R+    ++   D   G   G Y +    ++  +Y  EL+         +       +  
Sbjct: 61  LRWLGIEWDESVDC--GGEYGPYRQLERLDIYRQYVEELIEKG------LAYKCYCTSEE 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                +  + +   +I  S    +  +          L  +G  Y   +  P+++     
Sbjct: 113 LEAEREALSTHGHDNIHYSRRCLNATEEEK-----KELEARGE-YVVRIKVPENEEYTFN 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D+ R ++ F+S   GD     ++KS+G  TY FA  +     K    F       G +H 
Sbjct: 167 DIVRGEVTFKSEDFGDW---VIMKSNGIPTYNFAVVVDDHLMKITHVFR------GEEHL 217

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
               +   V  A      Q   +      L  +    K+SKR  D +    
Sbjct: 218 TNTPKQMMVYRAFGWDIPQFGHM-----TLIVNENGKKLSKRDKDTVQFIE 263


>gi|238022875|ref|ZP_04603301.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
 gi|237865683|gb|EEP66821.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
          Length = 927

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 102/336 (30%), Gaps = 66/336 (19%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  L    + ++ P      +QAM++      + R       +           H     
Sbjct: 433 NDALQAVDDTEFFPAWGRARLQAMIEQRPDWVVSRQRYWGTPMAFFAHKETGQLHPDSAE 492

Query: 272 PIRDIIDNLARQG-----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +  +   +  +G      + +  + PP+         D   + F S             
Sbjct: 493 LLEKVAQKIEEKGINAWFELDKADILPPEDCAQYDKLPDTMDVWFDS------------- 539

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLL 385
             GS  Y        K + E  +   +Y+ GSD   G+ +       A   +     +L 
Sbjct: 540 --GSTHYSV-----LKQREELAWPADLYLEGSDQHRGWFQSSMLTGCAAFGRAPYKQLLT 592

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
              V    D    KMSK  G+ +  + V +E G+D +R        S  L      +K  
Sbjct: 593 HGFVV---DQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAATDYSGDLAISKEILKRV 649

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
           ++         +Y R R+    A       DF+     V   +  E D   L L   L E
Sbjct: 650 TE---------SYRRIRNTL--AFLFANLSDFNPIEDAVPQADMVEIDRYALVLARQLQE 698

Query: 505 ------YP---------RVIENATIAQEPYKLAFYL 525
                 YP          +++  +        AFYL
Sbjct: 699 KLAGEHYPRYAFHFAVQELVQFCSEDLG----AFYL 730


>gi|225075658|ref|ZP_03718857.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
 gi|224953080|gb|EEG34289.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
          Length = 929

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISREILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARQLQE 700


>gi|169334634|ref|ZP_02861827.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259351|gb|EDS73317.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
          Length = 882

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   +      G  +   +   G    I     N TG +H+GH     + D L   
Sbjct: 12  DPGKIEGKIYEKWEKGGYFKPEINKDGKPFTIIMPPPNITGKLHIGHAFDDTLQDILIRY 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                    +  W              E +        V  ++
Sbjct: 72  KRMKGY--------------------AALWVPG-----------EDHASIATEVKVVDKI 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++      +   EK+L    +++ +   K I + ++ L    D          G    +
Sbjct: 101 KEETGKTKQDLGREKFLKEAWNWA-KTYRKEIANQVRKLGSSCDWSRERFTMDEGVSEAV 159

Query: 274 RDIIDNLARQGYVYEG 289
           ++    L ++G +Y G
Sbjct: 160 KETFIRLYKKGLIYRG 175



 Score = 36.8 bits (84), Expect = 9.7,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 15/133 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +        + +    + E           +  L RD    KMSK  G+
Sbjct: 487 TGFD-IIFFWVAR------MVFSGIEQMGEPP----FHHVYIHGLVRDSQGRKMSKSLGN 535

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    V+D+ G+D +RF ++   N    D  + + K ++  N    +  A    R I  
Sbjct: 536 GIDPLEVIDKYGADVLRFSLVTG-NKAGNDTRWQESKVEANRNFANKINNA---ARFILM 591

Query: 467 QAKDIFPDLDFDL 479
             +D   +   DL
Sbjct: 592 NLEDFDENKKADL 604


>gi|167770377|ref|ZP_02442430.1| hypothetical protein ANACOL_01720 [Anaerotruncus colihominis DSM
           17241]
 gi|167667384|gb|EDS11514.1| hypothetical protein ANACOL_01720 [Anaerotruncus colihominis DSM
           17241]
          Length = 548

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 98/283 (34%), Gaps = 32/283 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY--INDAGAQINT-----LALSV 181
           + +PTG MH+G+   A+  + LA       ++    +Y  I D   +          L V
Sbjct: 40  APSPTGFMHLGNLFGAIADERLA-------HQSGGVFYLRIEDTDQKREVPGAVETILQV 92

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           F  Y+       +   +    G Y +    ++   Y+  L+     K  P    +  +  
Sbjct: 93  FSDYELPFDEGATVDGDNGLYGPYRQRQRAQIYQTYAKWLVRQG--KAYPC---FCTEDE 147

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  IR+           +     +       +R  ++  A + +V         ++  + 
Sbjct: 148 LAAIREKQAERKENFGYYGKWAVYRDMPFDEVRGKLE--AGEPFVLRFRSEGDPARRVKF 205

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ +  +         D D  LLKSDG  TY     A+    +  G  ++  V G +  
Sbjct: 206 TDLVKGTMELPEN----DQDVVLLKSDGIPTYHF---AHVVDDHLMGTTHV--VRGEEWL 256

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +     + AA+  +  +   +    +    +G   K+SKR 
Sbjct: 257 ATLPIHIQLFAAMGWRMPK--YVHTAQLMKLDNGNKRKLSKRK 297


>gi|325201521|gb|ADY96975.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207500|gb|ADZ02952.1| isoleucyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 929

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|312873888|ref|ZP_07733926.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653980|ref|ZP_07906896.1| glutamate--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|311090564|gb|EFQ48970.1| glutamate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315488676|gb|EFU78322.1| glutamate--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 501

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 106/308 (34%), Gaps = 37/308 (12%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
              K+ + + + +PTG +H+G+ R A+     A       ++     +  R      + +
Sbjct: 4   AKEKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTMVLRIEDTDQKR-NVEGGSKS 61

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G   G Y +   K++ +KY  +LL+         
Sbjct: 62  QMENL----HWLGIDWDEGPDV----GGEYGPYRQSERKDIYNKYIQQLLDEG-----KA 108

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              Y+    ++  R++ +A+ I         ++       I+        +G      + 
Sbjct: 109 YYSYTTSEELEAQREEQRAMGIAPHYTY---EYEGMTADEIKQAQAAAEAKGLKPVVRIH 165

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+ +T    DM +  + F S  +G D    + K DG  TY  A +       +     +
Sbjct: 166 IPERRTYAWDDMVKGHVSFESDTIGGDF--VIQKRDGMPTYNFAVV------IDDHLMEI 217

Query: 353 IYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +V+ G DH     +   V  A +    +       +  +       K+SKR    +   
Sbjct: 218 THVLRGDDHVANTPKQLVVYEAFNWTPPKFAH----MTLIINAATGKKLSKRDESVLQFI 273

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 274 EQYRDLGY 281


>gi|187933633|ref|YP_001886694.1| valyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721786|gb|ACD23007.1| valine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 880

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 56/199 (28%), Gaps = 35/199 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P      +         +   +  K     I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEDRIYKTWEEKGYFTPVVDKKKKPFTIIMPPPNITGELHLGHAFDDTLQDMLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVG 210
                 GY                    +  W            LP E +        V 
Sbjct: 70  RFKRMQGY--------------------AALW------------LPGEDHASIATEVKVA 97

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            ELA K          E +L  V ++S       IR+ +K L +  D             
Sbjct: 98  NELA-KQGYNKKEMGREAFLEKVWEWSDDY-RARIRNQVKKLGVSADFTREAFTMDENLS 155

Query: 271 SPIRDIIDNLARQGYVYEG 289
           + ++ +   L  +G +Y+G
Sbjct: 156 AAVKHVFVKLYNEGLIYQG 174


>gi|154482469|ref|ZP_02024917.1| hypothetical protein EUBVEN_00136 [Eubacterium ventriosum ATCC
           27560]
 gi|149736670|gb|EDM52556.1| hypothetical protein EUBVEN_00136 [Eubacterium ventriosum ATCC
           27560]
          Length = 485

 Score = 51.1 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 110/300 (36%), Gaps = 50/300 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  RE  +         + +
Sbjct: 9   APSPTGRMHVGNLRTALYEFLIAKHAGGDFILRI-----EDTDRERLVE------GAVDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +  + G Y++       L  +Y+ +L+   +  +        
Sbjct: 58  IYRTMAETGLVHDEGPDKDKGF-GPYVQSERQASGLYLEYAKKLIESGD-AYYCFCDKER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++++   + +D K + +     +             ++ I      G  Y   +  P   
Sbjct: 116 LESLKTSVGEDGKEITVYDKHCLHLS----------KEEIQANLDAGKPYVIRINMPTEG 165

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
           TT   D    ++   +  +    D  L+KSDG  TY  A++       +     + +V+ 
Sbjct: 166 TTTFVDELYGEITVENKELD---DMILIKSDGYPTYNFANV------VDDHLQQITHVVR 216

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+++     + + +  A   +  +        + L  D    K+SKR+G   +   ++++
Sbjct: 217 GNEYISSSPKYQRLYEAFGWEPPKYVH-----LPLITDENHKKLSKRSGHA-SYEDLIEQ 270


>gi|257454653|ref|ZP_05619909.1| valyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447963|gb|EEV22950.1| valyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 981

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +  +      Y +    K    +I     N TG +H+GH     + DTL   
Sbjct: 19  NPSDVENGMYQVWEDK-GYFQPSYDKQQSFSIALPPPNVTGSLHMGHGFNNAIMDTLTRY 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                           +  L+   +D        V  + +  + 
Sbjct: 78  HRMLG---------------------------ENTLWQPGTDHAGIATQMVVERQLNAQG 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++     +   EK+L  + ++  ++   I R  ++ L    D          G  + +
Sbjct: 111 IKRH-----DLGREKFLEKIWEWKAESGGNITRQ-IRRLGSSVDWSRERFTMDDGLSNAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L   G +Y G          Q    D +
Sbjct: 165 KEVFVRLYEDGLIYRGKRLVNWDTKLQTALSDLE 198


>gi|256545439|ref|ZP_05472801.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398835|gb|EEU12450.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 875

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 76/266 (28%), Gaps = 40/266 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P    K +      G  +   +        I     N TG +H+GH     + D +    
Sbjct: 7   PQKFEKEIYKKWEEGGYFKARVNENKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYK 66

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYE                                   +P   +  +  +    E  
Sbjct: 67  RMQGYEAC--------------------------------WIPGTDHASISTEAKVVEKI 94

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   +K+L    D+  +     I+  L+ + +  D         +     +R
Sbjct: 95  KNEGKSKDDLGRDKFLEECWDW-TEEYGGTIKRQLRTVGVSCDWDRDSFTMDKNLTRAVR 153

Query: 275 DIIDNLARQGYVYEG---ILPPPKSKT----TQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +  +G +Y G   +   P++KT     +    D++  L+      +D D  +  +
Sbjct: 154 KVFKKMYDEGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIKYFFEDSDEFITIA 213

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
                    DLA      +  F + I
Sbjct: 214 TTRPETMLGDLAVAVNPEDERFKDKI 239


>gi|323340524|ref|ZP_08080779.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092068|gb|EFZ34685.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 678

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      G++V                   +    +  L  
Sbjct: 18  PSGKLHIGNSYTTIACDVLARYKRLQGFDVF-----------------FLTGTDEHGLKI 60

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +        P  Y+  + + +   +    L    +K++    DY V+A+ +I    LK 
Sbjct: 61  EEKAEELNMTPQEYVDSMAESIKKLWKQ--LEISNDKFIRTTDDYHVKAVEQIFEKLLKK 118

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I    +  + S  D      S + ++  +   +      ++        +   ++   
Sbjct: 119 GDIYLGKYKGWYSVSDEEYFTESQLAEVYRDENGK------MIGGKAPSGHEVELVEEDC 172

Query: 309 LLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERG------ 348
             F+ +   D          D   P  + +     F      DLA  +  +  G      
Sbjct: 173 YFFKMSKYADRLVEYYNEHPDFIMPETRKNEMLNNFINPGLEDLALTRTSFNWGVPVPSN 232

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQIN------------ 382
             ++IYV              GSD      R   A    V ++  + +            
Sbjct: 233 PKHVIYVWIDALCNYITALGYGSDDDSLFNRYWPADVHMVGKEIVRFHTIYWPIILMALD 292

Query: 383 -----VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                 +L     L +DG   KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 293 LPLPKHVLGHGWLLMKDG---KMSKSKGNVVYPEMIVERYGLDALRYYLIR 340


>gi|121534360|ref|ZP_01666184.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307130|gb|EAX48048.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 640

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 113/331 (34%), Gaps = 52/331 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------- 178
           P+  +H+GH  C  + D +A     +GY+V      ++ G +I   A             
Sbjct: 15  PSDRLHIGHAYCTTIADAIARYKRLAGYDVFFLTGSDEHGQKIERKAKEHGVTPIEYVDK 74

Query: 179 -LSVFWRYQQALYNNDSDL--PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            ++ F    + L  ++ D            ++ + +++ D+         E ++    + 
Sbjct: 75  IVASFKHLWEKLNISNDDFIRTTETRHKEVVQSIFQKIYDQ-GDIYKATYEGQYCTPCET 133

Query: 236 YSVQAMM------------KIIRDD--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           + ++  +            ++++++     L+   D  +    +   +P  I+       
Sbjct: 134 FWLERQLVDGKCPDCGRPVELVQEESYFFRLSKYQDRLL---QYIEENPDFIQPASRRNE 190

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
              ++  G+     S+TT    +          +  D      +  D    Y  A   Y 
Sbjct: 191 MINFIKSGLEDLCVSRTTFDWGIP---------VPFDTKHVVYVWFDALVNYITA-AGYL 240

Query: 342 KCKYERGFDNMIYV--MGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             + +        V  +G +    +      +  A+  +  ++      LV         
Sbjct: 241 HDREKFNKYWPADVHLVGKEIVRFHTIIWPIILMALGIELPKMVYGHGWLVV-----EGD 295

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ I    ++DE G+D++R+ +L  
Sbjct: 296 KMSKSKGNVIDPLALIDEFGADAIRYFLLKE 326


>gi|325197664|gb|ADY93120.1| isoleucyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 929

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|300024113|ref|YP_003756724.1| isoleucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525934|gb|ADJ24403.1| isoleucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 1050

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 81/257 (31%), Gaps = 36/257 (14%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD----------DVDRPLLKSD 328
              +   +   I      K       +  +  F   +V D          DV      S 
Sbjct: 584 EFKKSNELAARIEKAFAEKGADVWFEEGAKERFLKGLVADKDLAKWEQVKDVLDVWFDSG 643

Query: 329 GSYTYFAADLAYF------KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQI 381
            ++ +   D   F      + K + G D ++Y+ GSD   G+       +          
Sbjct: 644 STHAFTLEDPVAFPGFKGLRRKRDGGQDRVMYLEGSDQHRGWFHSSLLESCGTRGDAPYD 703

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            VL    V    D    KMSK  G+ +  + V+ + G+D +R  +     S+ L      
Sbjct: 704 VVLTHGFV---LDEKGQKMSKSLGNVVAPQDVIAKSGADILRLWVAASDYSDDLRIGPEI 760

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIV 500
           +K  S+          Y + R+  R             F  +      +    EL+ L++
Sbjct: 761 LKTFSE---------TYRKLRNTLRWMLGA-----LAHFKPSDAVAFKDMKPFELERLML 806

Query: 501 H-LAEYPRVIENATIAQ 516
           H LAE    +  A    
Sbjct: 807 HRLAELDHDVRRAYETY 823


>gi|332299205|ref|YP_004441126.1| Valyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176268|gb|AEE11958.1| Valyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 887

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 61/220 (27%), Gaps = 34/220 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  ++        I     N TG +H+GH     + D L   
Sbjct: 15  DPAGVETKWYQYWLDHKLFEAHVDHSKKPYTIIMPPPNVTGVLHMGHMLNNTIQDILIRR 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY           G    ++A       Q A       + +             E 
Sbjct: 75  ARISGYNACWVP-----GTDHASIATEAKVVEQLAKQG----IQKNQLTREDFLKHAWEW 125

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DKY   +L+                         L+ L +  D   +           +
Sbjct: 126 TDKYGGIILSQ------------------------LRRLGVSCDWSRTAFTLDEERSESV 161

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            ++   L  +G +Y G+         Q   +  ++++F+ 
Sbjct: 162 INVFCKLYEEGLIYRGVRVVNWDPKAQTA-LSDEEVIFKE 200


>gi|312622414|ref|YP_004024027.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202881|gb|ADQ46208.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 920

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 104/324 (32%), Gaps = 41/324 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSP 272
              L    + KW+P      +  M+   R D      +   +   IF  ++         
Sbjct: 426 DQALKAVDDVKWVPEWGRDRIYNMIAD-RQDWCISRQRIWGVPIPIFYCKNCRKELITDE 484

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
             D I  +  +    EG          +      K L+   +    + D   +  D   +
Sbjct: 485 TIDYIAKIFEK----EGSDAWFSKDVKELLPEGTKCLVCGCSEFEKETDIMDVWFDSGSS 540

Query: 333 YFAADLAYFKC-KYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +     AY    + +  +   +Y+ G+D   G+ +     A A   +     VL    V 
Sbjct: 541 H-----AYVLESREDLEWPCDMYLEGNDQYRGWFQSSLLTAVATKGRAPYRIVLTHGFVV 595

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I+   +++E G+D +R   +    +  +      +K+ ++   
Sbjct: 596 ---DGEGKKMSKSEGNVISPFDIINEFGADILRLWCVSADYTTDMRISKDIIKQLTEI-- 650

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                  Y + R+  R       D +      + +  E+  +  +  L   L +    + 
Sbjct: 651 -------YRKIRNTARFLLGNLYDFN---PKTDKVGYENLKEIDKWAL-QRLYKLIEKVT 699

Query: 511 NATIAQEPYKLAFY--LYDLASVF 532
            A           Y  +Y L   F
Sbjct: 700 KAYEEY------DYNQVYHLVHNF 717


>gi|194097685|ref|YP_002000725.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|254782423|sp|B4RPY6|SYI_NEIG2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193932975|gb|ACF28799.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 929

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 96/295 (32%), Gaps = 36/295 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504
                 +Y R R+            DF+     V   E  E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLS--DFNPIEDAVPQAEMVEIDRYALVLARRLQE 700


>gi|190150831|ref|YP_001969356.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264181|ref|ZP_07545773.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|254783547|sp|B3GYI3|SYV_ACTP7 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189915962|gb|ACE62214.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870472|gb|EFN02224.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 954

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               S + + L         +            I     N TG +H+GH     + DTL 
Sbjct: 10  RFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 70  RFNRMEGNNTLWQTGTDHAGIATQMV-------------------------------VER 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+   +    I   ++ L    D          G  +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSG-GTISQQMRRLGNSIDWDREHFTMDEGLSN 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +G +Y G               D +
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLE 193


>gi|116513122|ref|YP_812029.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108776|gb|ABJ73916.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 880

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +        +    +  +        +I     N TG +H+GH     + D + 
Sbjct: 8   KFNPTEVEAGRYEKWLEADVFKPSGNPDAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++             ++   ++   +   A    D  LP+             
Sbjct: 68  RQKRMQGFDTL-------WLPGMDHAGIATQAKVA-ARLAEDGILPQD-LGREKFLDKVW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+Y++                         I++    + I  D          G   
Sbjct: 119 EWKDEYATT------------------------IKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 272 PIRDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R +   L  +G++Y G   I   PK+ T     +    +     +  T   +  D  +
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYHITYQIEGSDEFV 214

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +      F  D A    + +  + +++
Sbjct: 215 EIATTRPETFLGDTAVIVNEKDERYKHLV 243



 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 32/242 (13%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKR 403
           ++R F     V G D   +      +  ++    K+  + +L     L RD    KMSK 
Sbjct: 468 FKRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTGKSPFHNVLIHG--LIRDEEGRKMSKS 524

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            G+ I    V+++ G+D++R+ +       + + F + K+         F  +      R
Sbjct: 525 LGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN----FINKIWNVS-R 579

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ------ 516
            I   A+D+  D       +             +     L      +E  T         
Sbjct: 580 YILMNAEDVSADAVSSALTKVANKTAGNVTDRWI-----LTRLNDTVERVTEQMDKFEFG 634

Query: 517 -EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
              + L  +++D    F   +    E  +      +  +  + R  L+H    +++  L 
Sbjct: 635 VAGHILYNFIWD---EFANWY---LELTKEVMFGEDEAEKDITRAVLLH----VLDQVLR 684

Query: 576 II 577
           ++
Sbjct: 685 LL 686


>gi|313886594|ref|ZP_07820307.1| valine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923950|gb|EFR34746.1| valine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 887

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 62/220 (28%), Gaps = 34/220 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  ++        I     N TG +H+GH     + D L   
Sbjct: 15  DPAGVETKWYQYWLDHKLFEAHVDHSKKPYTIIMPPPNVTGVLHMGHMLNNTIQDILIRR 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY           G    ++A       Q A       + +             E 
Sbjct: 75  ARISGYNACWVP-----GTDHASIATEAKVVEQLAKQG----IQKNQLTREDFLKHAWEW 125

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DKY   +L+                         L+ L +  D   +           +
Sbjct: 126 TDKYGGIILSQ------------------------LRRLGVSCDWSRTAFTLDEERSESV 161

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            ++   L  +G++Y G+         Q   +  ++++F+ 
Sbjct: 162 INVFCKLYEEGFIYRGVRVVNWDPKAQTA-LSDEEVIFKE 200


>gi|227874318|ref|ZP_03992503.1| valine--tRNA ligase [Oribacterium sinus F0268]
 gi|227839806|gb|EEJ50251.1| valine--tRNA ligase [Oribacterium sinus F0268]
          Length = 900

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +    + G  +   +        I     N TG +H+GH     + DTL   
Sbjct: 9   NPEEVEDRIYEKWLKGNAFAAKVNPNKKPFTIMMPPPNVTGQLHMGHALDNALQDTLIRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E              +  A++   +    L +   D  E    G +LK    + 
Sbjct: 69  KRMQGFEAL-------WQPGTDHAAIATEVKVINKLKDMGIDKWELGREG-FLKE-AWKW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y   ++N                         L  +    D          G    +
Sbjct: 120 KEEYEDRIVNQ------------------------LHKMGSSADWDRLRFTMDEGCSHAV 155

Query: 274 RDIIDNLARQGYVYEG 289
            +    L ++G +Y G
Sbjct: 156 LETFVRLYKKGLIYRG 171


>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 479

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 98/315 (31%), Gaps = 42/315 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R ++V DT+   + + G++VT      D   +I   A        +         
Sbjct: 37  HIGHARSSIVFDTIRRYLKYKGFDVTFVKNFTDVDDKIIKRANEENKSINEITDFFIKAH 96

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E       L+      A +Y   ++   E+                       A     
Sbjct: 97  DEDMDKLNILRPDYTPRATEYIDGMIKLCEKLIEKGF-----------------AYESNG 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        RD+ D LA                   K D     L  RS   
Sbjct: 140 DVYFKVRAFKDYGKLSKRDLDDLLA----------GARVDVNEIKEDPLDFALWKRSKEG 189

Query: 317 GDDVDRPLLKSDGSYTY----FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
               D P  +    +       +A++         G  ++I+     H   + + EA   
Sbjct: 190 EPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIF---PHHENEIAQSEAA-- 244

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
              E K      +      + +    KMSK  G+F T+R V+ EV  + +RF +L     
Sbjct: 245 ---EGKEFARYWIHNG---FVNINKEKMSKSLGNFFTIRDVLKEVDPEVLRFFLLTTHYR 298

Query: 433 ELLDFDFCKVKEQSK 447
             LDF F  + E   
Sbjct: 299 SPLDFSFENLLEAEN 313


>gi|295702327|ref|YP_003595402.1| glutamyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799986|gb|ADF37052.1| glutamyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 485

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 99/294 (33%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG +H+G+ R A+     A     +G  + R   I D   Q   +        RY 
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR--NQNGKFIIR---IEDT-DQKRNIEGGEESQLRYL 63

Query: 187 QALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + L    D  +  G   G Y +    E+  KY+ ELL      +          +     
Sbjct: 64  KWLGIEWDESIDVGGEYGPYRQSERTEIYQKYTEELLEKGLAYYCY------CTSEELEK 117

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             + +  N Q   +  +        +   +    L  +G         P +   +  D+ 
Sbjct: 118 EREEQQANSQMPRYSGKC------RNLTAEQRAELEAEGREPSIRFRVPSNTEIKWNDIV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     
Sbjct: 172 KDEVSFESEGIGDF---VIVKKDGTPTY---NYAVAIDDYLMKMTHVLR--GDDHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   V  A+         +      L  +    K+SKR    I       E+G 
Sbjct: 224 KQILVYEALGWTPPVFGHM-----TLIVNENRRKLSKRDESIIQFIEQYKELGY 272


>gi|289577361|ref|YP_003475988.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527074|gb|ADD01426.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 633

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 104/327 (31%), Gaps = 43/327 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A     +GY+V      ++ G +I  +A       ++ +  
Sbjct: 14  PSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAKEKGMSPKEYVDG 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               +         L  +     D++      + EE    I     +     I + + + 
Sbjct: 74  IVEWIK-------NLWKIMDISYDQFIRTTDKYHEEIVQKIF--TKLYEKGDIYKSEYEG 124

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE---------------------- 288
                 + F +E     G        ++ +  +GY ++                      
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDFIQPE 184

Query: 289 ---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA--DLAYFKC 343
                +        +   + R    +   +  D      +  D    Y  A     Y   
Sbjct: 185 SRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYSTYHDD 244

Query: 344 KYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            +++ +   ++++G +    +     A+  A+     +  V     + L       KMSK
Sbjct: 245 DFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPK-KVFGHGWLIL----EGGKMSK 299

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +  + +V + G D+VR+ +L  
Sbjct: 300 SKGNVVDPKELVSKYGVDAVRYFLLRE 326


>gi|15677669|ref|NP_274830.1| isoleucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81784233|sp|Q9JXY7|SYI_NEIMB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7227088|gb|AAF42168.1| isoleucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139653|gb|EGC62192.1| isoleucyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200894|gb|ADY96349.1| isoleucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 929

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|314936231|ref|ZP_07843578.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654850|gb|EFS18595.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 876

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        V    +            I     N TG +H+GH     + D +  +
Sbjct: 8   NPREVEAGRYEEWVKNEYFKPLEDESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   +    L             G+    +G+E 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVDAKLKE----------QGISRHDIGREK 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +++                    +     IR     L +  D          G    +
Sbjct: 111 FLEHAWSWK----------------EEYASFIRKQWAKLGLGLDYSRERFTLDDGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 155 RKVFVDLYNKGIIYRGERIINWDPVARTALSD 186


>gi|237739887|ref|ZP_04570368.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423495|gb|EEO38542.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 887

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 83/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +           +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKTWEESKFFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMRGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEEGLKKEDIGREKFLEMTWDWK-EKYGGIITQQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L   G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 RKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 106/357 (29%), Gaps = 67/357 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +               +F+            + +       + +   
Sbjct: 394 WLENIRDWCISRQIWWGHRIPAWYGPDRHVFV-----------AMDEAEAKEQAKKHYGH 442

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    +             L   STM   +  + L            DL Y       G
Sbjct: 443 DVELSQEEDVLDTWFSS--ALWPFSTMGWPEKTKEL------------DLFYPTNTLVTG 488

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +I+   +           +      KK     +    +   RD +  KMSK  G+  
Sbjct: 489 AD-IIFFWVAR--------MIMFGMYELKKIPFKNVFFHGI--VRDEIGRKMSKSLGNSP 537

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               ++ E G D++RF M++   S+  D  F         N  F  +   A    I    
Sbjct: 538 DPLDLIKEFGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLE 594

Query: 469 KDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                 +D       ++ +   S  + +   +   L ++   ++NA  A         +Y
Sbjct: 595 GFDVKSVDKTKLDYELVDKWIISRLNETAKDVEDCLEKFE--LDNAAKA---------VY 643

Query: 527 D-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           + L   F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 644 EFLRGDFCDWY---VEIAKIRLYNDDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|228475237|ref|ZP_04059963.1| valine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270848|gb|EEK12250.1| valine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 876

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        V    +            I     N TG +H+GH     + D +  +
Sbjct: 8   NPREVEAGRYEEWVKNEYFKPLEDESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRM 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    Y        ++   ++   +    L             G+    +G+E 
Sbjct: 68  KRMQGYD--TLYLPG-----MDHAGIATQAKVDAKLKE----------QGISRHDIGREK 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +++                    +     IR     L +  D          G    +
Sbjct: 111 FLEHAWSWK----------------EEYASFIRKQWAKLGLGLDYSRERFTLDDGLSKAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  +G +Y G          +    D
Sbjct: 155 RKVFVDLYNKGIIYRGERIINWDPVARTALSD 186


>gi|189345902|ref|YP_001942431.1| glutamyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692181|sp|B3EFG9|SYE_CHLL2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|189340049|gb|ACD89452.1| glutamyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 502

 Score = 50.7 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 104/295 (35%), Gaps = 24/295 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A  M   G  + R     D   ++     ++    + A
Sbjct: 11  APSPTGYLHVGGLRTALYNYLFAKKMK--GDFIIRIE-DTDQSRKVEDAQQNLIKTLEWA 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y++     +  +Y   LL   E+K        S +         
Sbjct: 68  GIVADESPVHGGSFGPYVQSERLHIYREYCDRLL---EDKHAYYCFSTSEELEENRQLQL 124

Query: 249 LKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + L  +++  ++ E+       S IR  +      G  Y   +  P   +    DM R 
Sbjct: 125 KQGLQPKYNRKWLPEEMGGAMPSSNIRKKMAE----GSPYVVRMKVPDYISVWFEDMIRG 180

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F S+ +    D+ L+KSDG  TY     A     +   F ++I   G +    + + 
Sbjct: 181 PVEFDSSTID---DQVLMKSDGFPTYHF---ASVIDDHLMEFTHIIR--GEEWLPSMPKH 232

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             +      +  +        + L  +    K+SKR GD     ++      D++
Sbjct: 233 LLLYEFFGWEPPKFAH-----LPLLLNPDRSKLSKRQGDVAVEDYIRKGYSCDAI 282


>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082319|sp|A7GRM0|SYI_BACCN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 921

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 118/343 (34%), Gaps = 65/343 (18%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + + SELL    E KW+P   +  +  M++  R D      +A  +   +F +E++    
Sbjct: 415 EAFRSELLQAVKETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAENNDPII 473

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               I  + +     G            + EG   P       + + D   + F S    
Sbjct: 474 TDETINHVANLFREHGSNVWFEREAKDLLPEGFTHPSSPNGEFRKETDIMDVWFDSGS-- 531

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
               + +L+               +   +R  D  +Y+ GSD   G+     + A AV+ 
Sbjct: 532 --SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTAVAVTG 573

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +        + 
Sbjct: 574 KAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQSDVR 630

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +K+ ++          Y + R+ FR    +    DF+     V   E        
Sbjct: 631 ISDDILKQVAE---------VYRKIRNTFRFL--LGNLADFNPAQDAVAKAELREVDR-- 677

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                L +   +I     A E        YD A+V+H   +  
Sbjct: 678 ---YMLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFC 710


>gi|222625608|gb|EEE59740.1| hypothetical protein OsJ_12199 [Oryza sativa Japonica Group]
          Length = 1061

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 100/338 (29%), Gaps = 54/338 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   S   S   +G +         I     N TG +H+GH     + D++   
Sbjct: 97  SPTAVEKSWYSWWESSGYFGADAASSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRW 156

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +        D+    +    LK      
Sbjct: 157 RRMSGYNTLWVPGVDHAGIATQVVVEKKLMRERNLTR---HDIGREEFVSEVLK-----W 208

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y   +LN                         L+ L    D         +     +
Sbjct: 209 KDEYGGTILNQ------------------------LRRLGASLDWSRECFTMDKPRSKAV 244

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDG-SY 331
            +    L +QG +Y          T +    D + +  F      +  +  +LK  G + 
Sbjct: 245 TEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVEVVETFYCVDYLEIKEETMLKVPGYNT 304

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----AVSEKKAQINVLLCE 387
           T     L  F    E G   +I            R+E +      AV  +  +   L   
Sbjct: 305 TVQFGVLISFAYPLEEGLGEIIVAT--------TRIETMLGDTAIAVHPEDGRYKHLHGR 356

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRF 424
                 +G  +K+       I    +VD   G+ +V+ 
Sbjct: 357 YAIHPFNGRKLKI-------ICDAELVDPTFGTGAVKI 387


>gi|116871573|ref|YP_848354.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740451|emb|CAK19571.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 665

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 116/336 (34%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++      K   +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLAQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    +++  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIERYGLDALRYYLLRE 341


>gi|78214062|ref|YP_382841.1| valyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78198521|gb|ABB36286.1| valyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 914

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 55/200 (27%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+               +  +    G   ++     N TG +H+GH     + DT+ 
Sbjct: 7   TYDPAGTEARWQQAWEDQGAFHPDPKAPGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G  V                                  LP   +  + ++ + +
Sbjct: 67  RYQRLAGKNVLC--------------------------------LPGTDHASIAVQTILE 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   E +L     +  ++  + I   L+ L    D          G   
Sbjct: 95  KQLKEEGKTRHDLGREAFLERAWQWKAESGGR-IVGQLRRLGYSVDWKRQRFTLDEGLSE 153

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            +++    L  QG +Y G  
Sbjct: 154 AVKEAFVRLHEQGLIYRGEY 173



 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 40/237 (16%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG+
Sbjct: 497 TGFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV---RDEQNRKMSKSAGN 545

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    ++D  G+D++RF ++        D      +++     V   +    +  +  R
Sbjct: 546 GIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKKDTSATVEASRNFANKLWNATR 605

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFY 524
            A                  Q  + D + LQL     L+   RV               Y
Sbjct: 606 FALMN--------LGGETPAQLGDPDPAALQLADRWILSRLARVSRETAERYS-----SY 652

Query: 525 --------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                   LY+ A +     +    +         +   L   R+        ++  
Sbjct: 653 GLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVA-----KQVLAK 704


>gi|330723608|gb|AEC45978.1| valyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 831

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 34/196 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + S++ K ++   +   +Y           +I     N TG +H+GH   + + DT+   
Sbjct: 6   NHSFVEKNINQKWIDK-KYFVPNRNPKKPFSIILPPPNVTGKLHLGHAWDSYLQDTIIRF 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V     ++ AG       ++   + ++ L   +                    
Sbjct: 65  KKLKGYDVLFLPAVDHAG-------IATQAKVEEKLLKQNI------------------- 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +   +K+L  V ++  +     I++    L +  D               +
Sbjct: 99  ------KKEDLGRQKFLEKVFEWKDEYYQN-IKEQWFKLGLGFDYTKERFTLDPQAQEAV 151

Query: 274 RDIIDNLARQGYVYEG 289
            D+   L ++G++Y+ 
Sbjct: 152 SDVFVTLYKKGFIYKA 167


>gi|326407749|gb|ADZ64820.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 880

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 79/269 (29%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + +      +    +  +        +I     N TG +H+GH     + D + 
Sbjct: 8   KFNPTEVEEGRYEKWLEADVFKPSGNPDAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++             ++   ++   +   A    D  LP+             
Sbjct: 68  RQKRMQGFDTL-------WLPGMDHAGIATQAKVA-ARLAEDGILPQD-LGREKFLDKVW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+Y++                         I++    + I  D          G   
Sbjct: 119 EWKDEYATT------------------------IKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 272 PIRDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R +   L  +G++Y G   I   PK+ T     +    +     +  T   +  D  +
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYHITYQIEGSDEFV 214

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +      F  D A    + +  + +++
Sbjct: 215 EIATTRPETFLGDTAVIVNEKDERYKHLV 243



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 68/439 (15%), Positives = 138/439 (31%), Gaps = 62/439 (14%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +++     +N+ G               +A     +DL E     V +K V  E+     
Sbjct: 290 HDLPMINMMNNDGTINENGGKYEGLDRFEARKQIVADLKELG-QLVDIKPVRHEVGHSER 348

Query: 219 SELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           + ++  P    +W   + + +  A+     +D                        I   
Sbjct: 349 TGVVVEPRLSTQWFVKMDELAKNAIANQTTEDAVEFYPPRFNDTFMQWMENVHDWVISRQ 408

Query: 277 I-------DNLARQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLL 325
           +             G +Y G   P     TQ  D+        L   STM   D +    
Sbjct: 409 LWWGHQIPAWYNEAGEMYVGEEAPEGEGWTQDADVLDTWFSSALWPFSTMGWPDENSADF 468

Query: 326 KS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           K     S      D+ +F          MI+      S                K+  + 
Sbjct: 469 KRYFPTSTLVTGYDIIFFWVS------RMIF-----QSLEFT-----------GKSPFHN 506

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           +L     L RD    KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 507 VLIHG--LIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKM 564

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                    F  +      R I   A+D+  D       +  +  ++  + ++  ++  L
Sbjct: 565 DAAWN----FINKIWNVS-RYILMNAEDVSADAVSSALTK--VANKTAGNVTDRWILTRL 617

Query: 503 AEYPRVIENATIAQEP----YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
            +  R +       E     + L  +++D    F   +    E  +      +  +  + 
Sbjct: 618 NDTARRVTEQMDKFEFGVAGHILYNFIWD---EFANWY---LELTKEVMFGEDEAEKDIT 671

Query: 559 RLQLVHAVASIINSGLNII 577
           R  L+H    +++  L ++
Sbjct: 672 RAVLLH----VLDQVLRLL 686


>gi|289450479|ref|YP_003475345.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185026|gb|ADC91451.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 1071

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + ++    NV++  LV+   D   IKMSK  G+ I+ +  +D +
Sbjct: 582 DQTRGWFYSLMAISTLLFDRTPYENVIVMGLVQ---DKDGIKMSKHKGNVISPQEAIDRM 638

Query: 418 GSDSVRFMMLWRKNSEL-LDFDFCKVKEQSK-------ENPVFYVQYAYA 459
           GSD+VR+      N  L   F F  V E  +           FY+ YA  
Sbjct: 639 GSDAVRWYFYTNSNPWLPSRFSFDSVAEGQRRFMGTLWNTYAFYILYADI 688


>gi|229551470|ref|ZP_04440195.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258540783|ref|YP_003175282.1| methionyl-tRNA synthetase/protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
 gi|229315153|gb|EEN81126.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257152459|emb|CAR91431.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
          Length = 660

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 114/339 (33%), Gaps = 58/339 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                         +   +
Sbjct: 16  PSGKLHIGNAYTTIAADVLARYKRLMGYDV------------FFLTGTDEHGLKIEQKAD 63

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK---IIR 246
                P+ Y  G    +K +  ++ +  + + +   +++ +  V++   + + +    + 
Sbjct: 64  KLGVTPQAYVDGMAAQIKQL-WKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVYLG 122

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +     +++ + + +E             +I   A  G+  + +  P       K     
Sbjct: 123 EYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTDR- 181

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIYVM- 356
             LL       D V     K++    +      DLA  +  +  G        +++YV  
Sbjct: 182 --LLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWV 239

Query: 357 -------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------- 394
                         +DH+ + K   A    + ++  + +++   ++ +  D         
Sbjct: 240 DALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYA 299

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                    KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 300 HGWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMR 338


>gi|325127582|gb|EGC50505.1| isoleucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 929

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHG-- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 597 FVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|298291756|ref|YP_003693695.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928267|gb|ADH89076.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 524

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 103/326 (31%), Gaps = 37/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS-----VFWRYQ 186
           P G  H+GH    +  D LA      GY+V      ++ G ++   A       + W  +
Sbjct: 20  PNGAPHIGHAYEKIAADALARFKKLDGYDVFFLTGTDEHGLKMAQTAEKQGLTPIEWATK 79

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------VKDYSV 238
            A    + D   G     +++   ++      +      E   + +        V+D + 
Sbjct: 80  NATRFKEMDALLGVDYDRFIRTTDEDHILSSQAIWQRMVEAGDIYLGAYSGWYSVRDEAY 139

Query: 239 QAMMK-IIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLAR-----QGYVYEGI 290
            A  +  +  D   L  Q     +  E  +     +  + ++D         +  V    
Sbjct: 140 YAEDETTVNADGVRLGPQGTPVEWTEEKSYFFRLSAYQQKLLDYYDAHPDFIRPDVRRNE 199

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYE 346
           +        Q   + R    +   + GD+     +  D    Y       D      K  
Sbjct: 200 VTSFVRSGLQDLSISRTTFTWGIPVPGDEAHVMYVWVDALTNYITGVGYPDTDSASFKRF 259

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
              D  ++++G D    + R  AV   A  +S   A    +        R     KMSK 
Sbjct: 260 WPAD--LHIIGKD----IIRFHAVYWPAFLMSAGIAPPKTVFAHGFIHNRG---EKMSKS 310

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ I    +    G D++R+ +L  
Sbjct: 311 VGNVIDPFDLAKAYGVDALRYFLLRE 336


>gi|118445100|ref|YP_879163.1| methionyl-tRNA synthetase [Clostridium novyi NT]
 gi|118135556|gb|ABK62600.1| methionyl-tRNA synthetase [Clostridium novyi NT]
          Length = 646

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 115/341 (33%), Gaps = 74/341 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D +A     +GY+       ++ G +I  LA             
Sbjct: 15  PSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEG----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  Y+  +   + D +  +++N   +K++    DY V+ + KI       
Sbjct: 64  ------KGITPKKYVDEIVAGIQDLW--KVMNISYDKFIRTTDDYHVETVQKIFEKLYDK 115

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G        ++    + Y ++      +     
Sbjct: 116 GDIYKGEYEGLYCTPCESFWTETQLVDGKCPDCGRPVEKTKEEAYFFKMSKYADRLIEYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   D  Q   R   + ++  RP             DL   +  ++ G    FD  ++IY
Sbjct: 176 ESHPDFIQPESRKNEMLNNFLRP----------GLQDLCISRTSFDWGIPVSFDEKHVIY 225

Query: 355 VM-----------GSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----- 395
           V            G D      Y K   A    V +   + + +   ++ +  D      
Sbjct: 226 VWIDALSNYITALGYDQENDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQ 285

Query: 396 ---------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                       KMSK  G+ +    +V+E G+D VR+ +L
Sbjct: 286 VFGHGWLLVDGGKMSKSKGNVVDPVTLVNEFGTDPVRYYLL 326


>gi|39932072|sp|Q7UNF9|SYE_RHOBA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 515

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 113/319 (35%), Gaps = 40/319 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        DAG  ++     +   ++  
Sbjct: 7   APSPTGYLHIGGVRTALFNWLLA---KQAGGQFILRIDDTDAGRNVDAALKPILDGFRWL 63

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +    +     + +LL           +D++    ++ +R++
Sbjct: 64  GMDWDEGPDVGGPHGPYFQSERGDQYRAAAEKLLADG-----HAYRDFAKPEELQTLREE 118

Query: 249 LKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +      +    +++ED+             +   RQG V    L  P+       D+ 
Sbjct: 119 AQKGGEAFVYDRRWMAEDE-------ATAAKFEAEGRQGVVR---LKMPREGQCVIQDLI 168

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R +++        + D  + ++DGS  Y    LA     +E    ++  V  ++H     
Sbjct: 169 RGEVVV---EWASEQDHVIARADGSPLYH---LASVVDDHELKITHV--VRAAEHLPNTA 220

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA-GDFITLRHVV------DEVG 418
           R   +A ++  +      +   L  +   G   K+SKR    +   R         +++ 
Sbjct: 221 RQVFIAQSLGYELP----IYAHLPYVAEPGGSAKLSKRKLDKYKKNRDFAVLLAHGEKIA 276

Query: 419 SDSVRFMMLWRKNSELLDF 437
                 +     N  L+DF
Sbjct: 277 ERCNMQVDADTFNPVLVDF 295


>gi|229825433|ref|ZP_04451502.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC
           49176]
 gi|229789996|gb|EEP26110.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC
           49176]
          Length = 897

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   +         +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKQIEDKIYHNWTEKGYFHAEVNPNKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+E           A  +  +++   +  + L    +   E    G   +    
Sbjct: 68  RFKRMQGFEAL-------WQAGTDHASIATEAKIVEKLKEEGTSKEELGREGFLKR--AW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y   +++                         LK L    D          G   
Sbjct: 119 EWKEEYGGRIISQ------------------------LKKLGSSCDWERERFTMDEGCSE 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++++   L  +  +Y+G
Sbjct: 155 AVKEVFVKLYDKKLIYKG 172


>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 921

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 126/391 (32%), Gaps = 87/391 (22%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E +W+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETQWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-----------GHW-SHGR 540
                    L +   +I     A E        YD A+V+H             +    +
Sbjct: 677 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFCTIDLSSFYLDFAK 723

Query: 541 ENPRLRFVQANNRKLTMMRLQ--LVHAVASI 569
           +   +      +R+     L   LV     +
Sbjct: 724 DILYIEGANHEDRRAIQTVLYDVLVALTKLV 754


>gi|170079458|ref|YP_001736096.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|229558794|sp|B1XND1|SYC_SYNP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169887127|gb|ACB00841.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 472

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 109/322 (33%), Gaps = 49/322 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  ++ D +   + +SGYEV       D   +I         R +++     ++ 
Sbjct: 38  HLGHARTCLIWDVVRRYLQWSGYEVHYIQNFTDIDDKILN-----RARAEKSSMGAIAEK 92

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y    ++ +  + AD+Y     +        ++ D   +      + D+     + 
Sbjct: 93  FIEAYF-EDMEALHIQPADEYPRATHSLD--GIQKLIHDLEQRGFAYASQGDVYYAVRKF 149

Query: 257 DIFISED-----DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           D +         D   G    + +  D   ++   ++  L           D        
Sbjct: 150 DGYGKLSGRKLDDMQAGASGRVNEDPDA-PKKHDPFDFALWKAAKAGEPAWDSPWGA--- 205

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKR 366
                            G   +     A  + +     D  I+V GSD     H   + +
Sbjct: 206 -----------------GRPGWHIECSAMVRDRLGETID--IHVGGSDLIFPHHENEIAQ 246

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            EA   A  +  A+   L   +V++       KMSK  G+FIT+R ++ +    +VR  +
Sbjct: 247 SEA---ATGQPLAKYW-LHNGMVKV----EGEKMSKSLGNFITIRELLKKYDPMAVRLFI 298

Query: 427 LWRKNSELLDFDFCKVKEQSKE 448
           L    ++ LDF    +   +K 
Sbjct: 299 LQAHYTKPLDFTDEALTAATKG 320


>gi|148556116|ref|YP_001263698.1| glutamyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|187645694|sp|A5VB94|SYE2_SPHWW RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|148501306|gb|ABQ69560.1| glutamyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 474

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 121/392 (30%), Gaps = 70/392 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  +   + +PTG +H+G  R A+     A      G +        D          +
Sbjct: 7   KQTVVTRFAPSPTGFLHIGGARTALFNWLFAR---HHGGKFLLRIEDTDRARSTQEAIDA 63

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +    +      D ++   +        V +EL A+ ++      PEE          ++
Sbjct: 64  ILDGMRWLDLGWDGEVVYQFARAERHAEVARELLANGHAYRCYATPEELA-------ELR 116

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              +  +  L+      D   SE                            +   K+  T
Sbjct: 117 EQQRAAKQPLRYDGRWRDRDPSEA---------------------PAGAPFVIRLKAPRT 155

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            +  +D +     +    +  D  LL+SDG+ TY    LA     ++ G  ++I   G D
Sbjct: 156 GEVTIDDQVQGPVTVQNAELDDMILLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDD 210

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG- 418
           H     R  A+  A+  ++      +   + L       K+SKR G  + +    DE+G 
Sbjct: 211 HLNNAFRQLALIRAMGWEEP-----VYAHIPLIHGADGAKLSKRHG-ALGVDAYRDELGL 264

Query: 419 ------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE--NPVF 452
                                     +V +  L         FDF K++  +        
Sbjct: 265 LSEAVNNYLLRLGWGHGDDEIISREQAVEWFDLAGVGRSPSRFDFKKLENLNGHYMREAD 324

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
             + A      +  +A   F   D DL  R++
Sbjct: 325 DARLADLIAPGVAARAGREFDSADHDLLLRSI 356


>gi|21282174|ref|NP_645262.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485354|ref|YP_042575.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207407|ref|ZP_06923846.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910366|ref|ZP_07127819.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|25009356|sp|Q8NY00|SYM_STAAW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|60390700|sp|Q6GBZ8|SYM_STAAS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21203610|dbj|BAB94310.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243797|emb|CAG42222.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296887970|gb|EFH26864.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888355|gb|EFK83542.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|125973305|ref|YP_001037215.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003786|ref|ZP_05428774.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417508|ref|ZP_06248528.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|125713530|gb|ABN52022.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992347|gb|EEU02441.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408910|gb|EFB39168.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940462|gb|ADU74496.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 931

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 17/169 (10%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     A A   +     VL    V    DG   KMSK  G+ I    
Sbjct: 559 YLEGSDQHRGWFQSSLLTAVATKGQAPYKTVLTHGYVV---DGEGRKMSKSLGNGIDPED 615

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ E G+D +R  +        +      +K+ S+          Y + R+  R      
Sbjct: 616 VIKEYGADILRLWVASSDYRTDIRISKDILKQLSE---------VYRKIRNTCRYILGNI 666

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            D D +   ++++  +   +  +  L+  L    + + +A    E + +
Sbjct: 667 YDFDPN---KDMVSYDEMNELDKWALMK-LNGLIKKVNDAYEKYEFHLM 711


>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 932

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 106/312 (33%), Gaps = 58/312 (18%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D     +    + EG   P       + + D   + F S        + +LK D   +Y 
Sbjct: 502 DAWWAHSEAELLPEGFTCPACGSHEFRKESDIMDVWFDSGCT----HQGVLKHDPDLSYP 557

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                             +Y+ GSD   G+       + A +       VL         
Sbjct: 558 CD----------------LYLEGSDQHRGWFNSSLLTSVATNGYAPYKAVLTHGF---TV 598

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +  + V+++ G+D +R  +        +      +K+ S       
Sbjct: 599 DGEGRKMSKSVGNTVAPQEVIEKYGADVMRLWVSSADYQGDIRLSPKILKQLSD------ 652

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
               Y + R+ FR       D D     ++ +P E+  +  +  L   L +    +  + 
Sbjct: 653 ---VYRKIRNTFRYLLGSLADFD---PAKDSVPYEALTELDKWAL-SRLEQVRESVTESY 705

Query: 514 IAQEPYKL-------AFYLYDLASVF-----HGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
              + + +            DL++++        ++  ++ P  R     + + T+ R+ 
Sbjct: 706 ETYQFHVMYHTIHNFCT--VDLSAMYLDVIKDRLYTERQDAPVRR-----SAQTTIYRIL 758

Query: 562 --LVHAVASIIN 571
             LV  VA +++
Sbjct: 759 TTLVKIVAPVLS 770


>gi|149920369|ref|ZP_01908839.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149818811|gb|EDM78253.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 537

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 82/318 (25%), Gaps = 28/318 (8%)

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
             MH+GH R     D     + + GY V       D   +I   A               
Sbjct: 48  SDMHIGHARTYCFWDVFRRWLEYRGYHVISVINYTDIDDRIIKDAREKGEGTLDLAERVV 107

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
           +         + +K            E      +  +     Y V+  +       +   
Sbjct: 108 ASFRRDC-RALKIKDYAVYTRATDFVEEQIAAVKALVDKGHAYVVEGEVLYDVRSFERYG 166

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
                 +S                     +   +        SK  + C    +      
Sbjct: 167 Q-----LSGRSLEGMQEGASGRTDSAETSRKRFFADFTLWKPSKEGEPCWQTGEAEW--- 218

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAV 370
                          G   +     A       + FD     I  +   H   V + E +
Sbjct: 219 -------------PSGRPGWHIECSAMSTTTLGKNFDVHGGGIDNLFPHHENEVAQSEPL 265

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
                       +    L  L  +G PIKMSK  G+ I++  +V + G D+ R+      
Sbjct: 266 C---GHPWVNYWMHPAHLQLLNEEGQPIKMSKSLGNVISIGDLVAKHGPDAARWYFGVTH 322

Query: 431 NSELLDFDFCKVKEQSKE 448
               L F++  + E +K 
Sbjct: 323 YRSSLAFNWQLLDEATKG 340


>gi|78222176|ref|YP_383923.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193431|gb|ABB31198.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 887

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 67/253 (26%), Gaps = 41/253 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +    +      +I     N TG +H+GH     + D L    
Sbjct: 12  PQAVEEKWYRTWEREGYFRAEAVSDKPSYSIVIPPPNVTGALHMGHALNNTLQDVLCRWK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SG+ V                           L+   +D        V  + +  E  
Sbjct: 72  RMSGHNV---------------------------LWMPGTDHAGIATQNVVERQLAAE-- 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       + ++  V  +  ++  +II   LK L    D          G    +R
Sbjct: 103 ---GKSRHELGRDAFIERVWKWKAESGGQIIGQ-LKRLGASCDWERERFTMDEGLSRAVR 158

Query: 275 DIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           ++   L  +G +Y                S    + +     L      V D+  R ++ 
Sbjct: 159 EVFVRLYEEGLIYRDNRLINWCPRCHTALSDIEVEHEEKAGNLWHLRYPVADEPGRFVVV 218

Query: 327 SDGSYTYFAADLA 339
           +         D A
Sbjct: 219 ATTRPETMLGDTA 231


>gi|82750197|ref|YP_415938.1| methionyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|82655728|emb|CAI80127.1| ethionyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|282915808|ref|ZP_06323576.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283768925|ref|ZP_06341834.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282320299|gb|EFB50641.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283461106|gb|EFC08192.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|262395188|ref|YP_003287042.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338782|gb|ACY52577.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 942

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 107/324 (33%), Gaps = 40/324 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            V  + A   +  L +    +W+P      ++ M        I R     + I   +   
Sbjct: 427 FVSMDQAGLRAKALESIKNVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 486

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H      I  +   +  +G           +      D D+ + +  +  V  D  
Sbjct: 487 TAELHPNTLELIEKVAKLVEEKGI---QAWWDVDAAELLGADADQYEKVLDTLDVWFDS- 542

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
                  G   +   D      + E   ++  +Y+ GSD   G+ +     + A+ ++  
Sbjct: 543 -------GVTHFSVVDA-----REEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAP 590

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +    
Sbjct: 591 YKQVLTHGFVV---DGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS- 646

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ ++S +        AY R R+  R         + +    +++P E         + 
Sbjct: 647 DEILKRSAD--------AYRRIRNTSRFFLANLSGFNPE---TDIVPVEEMVALDRWAVG 695

Query: 500 VHLAEYPRVIENATIAQEPYKLAF 523
             LA    ++  A      + +  
Sbjct: 696 RALAAQEEIV-KAYEEYNTHGVTQ 718


>gi|238692749|sp|B3QQC6|SYE_CHLP8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 503

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 111/306 (36%), Gaps = 25/306 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
             G +V   F + +PTG +HVG  R A+     A     +G  V R     D   ++   
Sbjct: 1   MAGQRVRTRF-APSPTGYLHVGGLRTALYNYLFAK--RMNGEFVIRIE-DTDQSRKVEDA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++    + A    D     G   G Y++    ++  KY  +LL   ++K        S
Sbjct: 57  EKNLISTLEWAGIIADESPMHGGNYGPYVQSQRLDIYKKYCQQLL---DDKNAYYCFSTS 113

Query: 238 VQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +          + L  +++  ++ ED       S I+  +D     G  Y   +  P  
Sbjct: 114 EELEENRQLQLKQGLQPKYNRKWLPEDMGGSMPQSEIKKKLDE----GVPYVVRMKVPDY 169

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            +    D+ R  + F S  +    D+ L+KSDG  TY     A     +   F ++I   
Sbjct: 170 VSVWFEDVIRGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLMEFTHIIR-- 221

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G +    + +   +      +  +        + L  +    K+SKR GD     +V   
Sbjct: 222 GEEWLPSMPKHLLLYEFFGWEPPKFAH-----LPLLLNPDRSKLSKRQGDVAVEDYVRKG 276

Query: 417 VGSDSV 422
             S+++
Sbjct: 277 YSSEAI 282


>gi|83589396|ref|YP_429405.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83572310|gb|ABC18862.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 880

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 58/198 (29%), Gaps = 39/198 (19%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            +   K       +G   G          +I     N TG +H+GH     + D L    
Sbjct: 11  KAVEEKWYHYWSENGYFRGHLPAKGQPAFSIVMPPPNVTGSLHLGHALDNTLQDILTR-- 68

Query: 155 AFSGYEVTREYYINDAGAQI---NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               +   R     DA   I   +   ++   R ++ L                      
Sbjct: 69  ----WHRMR----GDATLWIPGTDHAGIATQARVEEEL---------------------- 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   +++L  V ++  Q   +I R  L+ L    D          G   
Sbjct: 99  ---AKEGLSKYDLGRDRFLERVWEWKHQYGDRITRQ-LRLLGSSCDWSRERFTMDEGCSR 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R++   L  +G +Y G
Sbjct: 155 AVREVFVRLYEKGLIYRG 172


>gi|315301039|ref|ZP_07872357.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630592|gb|EFR98407.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 664

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 111/336 (33%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKWLPIV----------KDY 236
                 E +         +++          +       E+  + +           ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKTSVAKIFEQLVEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDESGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P      +   + R    +   + G+      +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|283469782|emb|CAQ48993.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         Q   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHQVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|253575851|ref|ZP_04853186.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844894|gb|EES72907.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 673

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 47/335 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      G++V      ++ G +I   A       QQ +  
Sbjct: 16  PSDKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQKAKEKGQTPQQFVDG 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGK---ELADKYSSELLNFPE------EKWLPIVKD-- 235
             + + +           +++       ++ +     LL   +      E W  I  +  
Sbjct: 76  IVAGIKQLWEKLDISYDDFIRTTEPRHKQVVEAIFDRLLKQGDIYKGEYEGWYSIPDETY 135

Query: 236 YSVQAMMKIIRDDLKAL-------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           Y+   ++ +IR++   +       +      + E+ +       +  ++          +
Sbjct: 136 YTESQLVDVIRNEKGEVIGGKSPESGHAVELVKEECYFFRMSKYVDRLLKFYEENPDFIQ 195

Query: 289 ------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                  ++        +   + R    +   + GD      +  D    Y  A L Y  
Sbjct: 196 PESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWIDALSNYITA-LGYGT 254

Query: 343 CKYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
              E  F+      ++++G +    H+ Y      +  A+     +   +      L + 
Sbjct: 255 DNQEL-FERYWPADVHLVGKEIVRFHTIY---WPIMLMALGLPLPKK--VFGHGWLLMKG 308

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           G   KMSK  G+ +    ++D  G D+ R+ +L  
Sbjct: 309 G---KMSKSKGNVVDPNVLIDRYGLDATRYYLLRE 340


>gi|199597844|ref|ZP_03211270.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258509579|ref|YP_003172330.1| methionyl-tRNA synthetase/ protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|199591280|gb|EDY99360.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257149506|emb|CAR88479.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|259650846|dbj|BAI43008.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 660

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 114/339 (33%), Gaps = 58/339 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                         +   +
Sbjct: 16  PSGKLHIGNAYTTIAADVLARYKRLMGYDV------------FFLTGTDEHGLKIEQKAD 63

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK---IIR 246
                P+ Y  G    +K +  ++ +  + + +   +++ +  V++   + + +    + 
Sbjct: 64  KLGVTPQAYVDGMAAQIKQL-WKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVYLG 122

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +     +++ + + +E             +I   A  G+  + +  P       K     
Sbjct: 123 EYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTDR- 181

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIYVM- 356
             LL       D V     K++    +      DLA  +  +  G        +++YV  
Sbjct: 182 --LLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWV 239

Query: 357 -------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------- 394
                         +DH+ + K   A    + ++  + +++   ++ +  D         
Sbjct: 240 DALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYA 299

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                    KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 300 HGWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMR 338


>gi|78187575|ref|YP_375618.1| glutamyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|115305783|sp|Q3B256|SYE_PELLD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78167477|gb|ABB24575.1| glutamyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 504

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 64/317 (20%), Positives = 112/317 (35%), Gaps = 37/317 (11%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA------ 170
              G +V   F + +PTG +HVG  R A+     A     +G  + R   I D       
Sbjct: 2   HMVGKRVRTRF-APSPTGYLHVGGLRTALYNYLFAK--KMNGDFIIR---IEDTDQSRKV 55

Query: 171 -GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            GAQ   L  ++ W     L  ++S +  G   G YL+    EL   Y  +LL   E+  
Sbjct: 56  EGAQ-QNLIKTLEWA---GLVPDESPV-HGGNFGPYLQSERLELYAGYCRQLL---EDGT 107

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                  S +          + L  +++     +D     P   R   + +   G  Y  
Sbjct: 108 AYYCFATSEELEENRQLQMKQGLQPKYNRKWLPEDMGGSMP---RSESEKMLASGAPYVI 164

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +  P   +    D+ R  + F S  +    D+ L+KSDG  TY     A     +   F
Sbjct: 165 RMKVPDYVSVWFEDIIRGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLMEF 218

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I   G +    + +   +      +  +        + L  +    K+SKR GD   
Sbjct: 219 THIIR--GEEWLPSMPKHLLLYEFFGWEPPK-----YAHLPLLLNPDRSKLSKRQGDVAV 271

Query: 410 LRHVVDEVGSDSVRFMM 426
             ++      +++   +
Sbjct: 272 EDYIQKGYSQEAIINFI 288


>gi|311070739|ref|YP_003975662.1| glutamyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871256|gb|ADP34731.1| glutamyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 483

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 97/292 (33%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR---NQGGKFIIRVEDTDQKRNIEGGEQSQLNYLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRD 247
             + D  +  G   G Y +    ++   Y  ELL      K     ++   +   +I R 
Sbjct: 67  GIDWDESVDVGGEYGPYRQSERNDIYRVYYEELLEKGLAYKCFCTEEELEKEREEQIARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +H     E+              D    +G         P+ K     D+ + 
Sbjct: 127 EMPRYSGKHRNLTQEEQ-------------DQFLAEGRKPSIRFRVPEGKIIAFNDIVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++K DG+ TY   + A     Y     +++   G DH     + 
Sbjct: 174 EISFESDGIGDF---VIVKKDGTPTY---NFAVAVDDYLMKMTHVLR--GEDHISNTPKQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A         + +   + L  +    K+SKR    I       ++G 
Sbjct: 226 IMIYQAFGWD-----IPVFGHMTLIVNESRKKLSKRDESIIQFIEQYKDLGY 272


>gi|56460236|ref|YP_155517.1| isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821756|sp|Q5QZS6|SYI_IDILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56179246|gb|AAV81968.1| Isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 944

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 93/251 (37%), Gaps = 28/251 (11%)

Query: 296 SKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            K  Q  + D  Q  F     T++GD+ D+    +D    +F + + +     E  FD +
Sbjct: 502 EKVAQLIEKDGVQAWFDLEPETLLGDEADKYRKVTDTLDVWFDSGVTHHCVLRE--FDGL 559

Query: 353 -----IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                +Y+ GSD   G+ +       A+ ++     VL         D    KMSK  G+
Sbjct: 560 RWPADLYLEGSDQHRGWFQSSLVTGVAMYDEAPYHQVLTHGF---TVDAQGRKMSKSIGN 616

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +  + V++++G D +R  +     S  +     ++ ++S +        AY R R+  R
Sbjct: 617 VVAPQDVMNKLGGDILRLWVASADYSGEMTVS-DEILKRSAD--------AYRRIRNTSR 667

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                    D     ++++ +E   +     ++   A+    +  A    + + +   L 
Sbjct: 668 FLLANLSGFD---PKQDLVAKEDMVELDRW-IVGRAADLQNELLEAYNNYQFHSVVQKLM 723

Query: 527 DLAS-VFHGHW 536
              S      +
Sbjct: 724 HFCSIELGSFY 734


>gi|329731069|gb|EGG67441.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|120602286|ref|YP_966686.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166980054|sp|A1VCU3|SYI_DESVV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120562515|gb|ABM28259.1| Isoleucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 938

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 63/328 (19%), Positives = 116/328 (35%), Gaps = 49/328 (14%)

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR-GDPSPIRDIID 278
            + +W+P      +  M++  R D      +   +     + ED      D   +RDI +
Sbjct: 437 DDVRWIPSWGQERIHNMIE-FRPDWCISRQRMWGVPIVALLCEDCGEAWNDADWMRDIAE 495

Query: 279 NLARQG----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             A+      Y YE  L         +C         + T + D      +  D   ++ 
Sbjct: 496 RFAKHATGCDYWYETDLSDIVPAGL-RCPKCGGDHWKKETDILD------VWFDSGTSFA 548

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRL 391
               A  + + E GF   +Y+ GSD   G+      + A++  +      +VL    V  
Sbjct: 549 ----AVVEQREECGFPADLYLEGSDQHRGWFHSS--LLASIGTRGVPPYRSVLTHGYVV- 601

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             DG   KMSK  G+ +  + ++D+ G++ +R  +      E +      +         
Sbjct: 602 --DGDGRKMSKSVGNVVAPQEIIDKHGAEVLRLWVASVDYREDIRISEEILNRLVD---- 655

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPRVI 509
                AY R R+  R           DL P  ++P E+    D   L L    +     I
Sbjct: 656 -----AYRRIRNTCRYLLGNIS----DLTPETMVPFEAMDPLDRFALDLA---SRAHERI 703

Query: 510 ENATIAQEPYKLAFYLYDLA-SVFHGHW 536
           ++A    E +K+   L++L  +     +
Sbjct: 704 QDAYTEYEFHKVFHTLHNLCVTDLSAFY 731


>gi|78044237|ref|YP_361414.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996352|gb|ABB15251.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 653

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 60/445 (13%), Positives = 134/445 (30%), Gaps = 79/445 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DT+A     +GY+V      ++ G +I   A S      Q L  
Sbjct: 14  PSDNLHIGHAYTTVAADTMARFKRMTGYDVWFLTGSDEHGQKIERKAKS------QGLSP 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
            +   P      V       +L D    + +   EE+   +V+    +      I +   
Sbjct: 68  KEYVDPI-----VDSFKHLWKLLDISYDDFIRTTEERHKKVVQAIFQKLYDQGDIYKSAY 122

Query: 250 KALNIQHDI---------------------FISEDDFHRGDPSPIRDIIDNLARQGYV-- 286
           +                             +  E+ +          ++ ++        
Sbjct: 123 EGWYCTPCEAFWTEGKLIDGKCPDCGRPVEWTREESYFFKMSKYADRLLKHIEENPEFIV 182

Query: 287 ---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                  +     +  +   + R    +   +  D      +  D    Y +A       
Sbjct: 183 PESRRNEMINFIKQGLEDLCVSRTTFNWGIPVPFDKKHVVYVWVDALTNYISA------- 235

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------- 394
                   + Y    DH  + K   A    V +   + + ++  ++ L            
Sbjct: 236 --------LGYGTDDDH-LFQKYWPADVHLVGKDIVRFHTVIWPIILLALGIELPKKVVG 286

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-LDFDFCKVKEQSKE 448
                    KMSK  G+ +    +V++ G D+VR+ ++      L   +    +  +   
Sbjct: 287 HGWFVLEGGKMSKSKGNVVDPVKLVEKYGVDAVRYFLVREMPLGLDAVYSEEALINRINV 346

Query: 449 NPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           +    +     R  S+  +    +I    +++   R VI        +E +    + ++ 
Sbjct: 347 DLANDLGNLLNRTLSMLEKFLGGEIPLPSEYEEIDREVIELALAL-PAETE--KLMDKFD 403

Query: 507 RVIENATIA--QEPYKLAFYLYDLA 529
             +  A     +   +L  Y+ ++A
Sbjct: 404 --LAGALANIWRLVTRLNKYIDEVA 426


>gi|46580336|ref|YP_011144.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|81566588|sp|Q72AR5|SYI_DESVH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46449753|gb|AAS96403.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233685|gb|ADP86539.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 938

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 63/328 (19%), Positives = 116/328 (35%), Gaps = 49/328 (14%)

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR-GDPSPIRDIID 278
            + +W+P      +  M++  R D      +   +     + ED      D   +RDI +
Sbjct: 437 DDVRWIPSWGQERIHNMIE-FRPDWCISRQRMWGVPIVALLCEDCGEAWNDADWMRDIAE 495

Query: 279 NLARQG----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             A+      Y YE  L         +C         + T + D      +  D   ++ 
Sbjct: 496 RFAKHATGCDYWYETDLSDIVPAGL-RCPKCGGDHWKKETDILD------VWFDSGTSFA 548

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRL 391
               A  + + E GF   +Y+ GSD   G+      + A++  +      +VL    V  
Sbjct: 549 ----AVVEQREECGFPADLYLEGSDQHRGWFHSS--LLASIGTRGVPPYRSVLTHGYVV- 601

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             DG   KMSK  G+ +  + ++D+ G++ +R  +      E +      +         
Sbjct: 602 --DGDGRKMSKSVGNVVAPQEIIDKHGAEVLRLWVASVDYREDIRISEEILNRLVD---- 655

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPRVI 509
                AY R R+  R           DL P  ++P E+    D   L L    +     I
Sbjct: 656 -----AYRRIRNTCRYLLGNIS----DLTPETMVPFEAMDPLDRFALDLA---SRAHERI 703

Query: 510 ENATIAQEPYKLAFYLYDLA-SVFHGHW 536
           ++A    E +K+   L++L  +     +
Sbjct: 704 QDAYTEYEFHKVFHTLHNLCVTDLSAFY 731


>gi|31544917|ref|NP_853495.1| glutamyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|39932039|sp|Q7NAE5|SYE_MYCGA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|31541764|gb|AAP57063.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Mycoplasma gallisepticum str. R(low)]
 gi|284930995|gb|ADC30934.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Mycoplasma gallisepticum str. R(high)]
          Length = 498

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 101/291 (34%), Gaps = 57/291 (19%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIND-AGAQINTLA 178
           + +PTG  H+G  R A+          G+ +  +      +   E  + D A  Q+  L 
Sbjct: 9   APSPTGYFHIGGARTALFNYLFAKHNNGEFIVRI-----EDTDIERNVEDGAENQLYNL- 62

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                ++     +     P     G Y +    E+  KY+ +LL     +     + +  
Sbjct: 63  -----KWLNIFADESIWNPTQS--GPYRQSEKLEVYQKYAYQLL-----EEKKAYRCFCT 110

Query: 239 QAMMKIIRDDLKA-----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
              ++  R+DL       +  +    +SE+  H+     I   I  L R    Y      
Sbjct: 111 PEELQKHREDLLKQYKPPIYSRKCFLLSEEQIHKNLADKIPFTIRLLLRDNKEY------ 164

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                    D+ R  L+F ++ + D     +LKS+   TY   + A     ++    +++
Sbjct: 165 ------SWNDLIRGNLIFNTSSMSDP---VILKSNQIATY---NFAVVIDDHDMKISHIL 212

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              G +H        A+  A+  K       +   + +  D    K+SKR 
Sbjct: 213 R--GEEHISNTPYQLAIKEALGFKDE----FVYGHLSIIVDETGKKLSKRN 257


>gi|15923480|ref|NP_371014.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926167|ref|NP_373700.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|156978818|ref|YP_001441077.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253316233|ref|ZP_04839446.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253735224|ref|ZP_04869389.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005283|ref|ZP_05143884.2| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|258429606|ref|ZP_05688280.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|269202110|ref|YP_003281379.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895097|ref|ZP_06303317.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|296276555|ref|ZP_06859062.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039687|sp|P67579|SYM_STAAN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54042047|sp|P67578|SYM_STAAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13700380|dbj|BAB41678.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246258|dbj|BAB56652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156720953|dbj|BAF77370.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253726784|gb|EES95513.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257849665|gb|EEV73632.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|262074400|gb|ACY10373.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282762515|gb|EFC02655.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|86143728|ref|ZP_01062104.1| isoleucyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85829771|gb|EAQ48233.1| isoleucyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 1136

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A    +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 644 GVDQTRGWFYTLHAIATMTFDDVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFTTLN 700

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G D+ R+ M+   N  + L FD   + E Q K     Y  Y++    +          
Sbjct: 701 TFGPDATRWYMISNANPWDNLKFDLDGITEIQRKFFGTLYNTYSFFSLYANLDNFTYAEA 760

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           D+++   P       SE  T    LI  + ++           EP
Sbjct: 761 DIEWKDRPEIDRWILSELHT----LIAQVEKF-------YSEYEP 794


>gi|298693820|gb|ADI97042.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|153834658|ref|ZP_01987325.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868910|gb|EDL67968.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 942

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 107/324 (33%), Gaps = 40/324 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            V  + A   +  L +    +W+P      ++ M        I R     + I   +   
Sbjct: 427 FVSMDQAGLRAKALESIKNVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 486

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H      I  +   +  +G           +      D D+ + +  +  V  D  
Sbjct: 487 TAELHPNTLELIEKVAKLVEEKGI---QAWWDVDAAELLGADADQYEKVLDTLDVWFDS- 542

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
                  G   +   D      + E   ++  +Y+ GSD   G+ +     + A+ ++  
Sbjct: 543 -------GVTHFSVVDA-----REEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAP 590

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +    
Sbjct: 591 YKQVLTHGFVV---DGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS- 646

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ ++S +        AY R R+  R         + +    +++P E         + 
Sbjct: 647 DEILKRSAD--------AYRRIRNTARFFLANLSGFNPE---TDIVPVEEMVALDRWAVG 695

Query: 500 VHLAEYPRVIENATIAQEPYKLAF 523
             LA    ++  A      + +  
Sbjct: 696 RALAAQEEIV-KAYEEYNTHGVTQ 718


>gi|49482717|ref|YP_039941.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424601|ref|ZP_05601029.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257429904|ref|ZP_05606290.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432607|ref|ZP_05608969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435511|ref|ZP_05611561.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903075|ref|ZP_06310967.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904865|ref|ZP_06312725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907812|ref|ZP_06315650.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910128|ref|ZP_06317934.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913317|ref|ZP_06321108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918271|ref|ZP_06326011.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923022|ref|ZP_06330708.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957279|ref|ZP_06374737.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500366|ref|ZP_06666218.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509304|ref|ZP_06668020.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293515893|ref|ZP_06670583.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427024|ref|ZP_06819661.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591600|ref|ZP_06950237.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|60390704|sp|Q6GJI1|SYM_STAAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49240846|emb|CAG39513.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272628|gb|EEV04748.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257279420|gb|EEV10015.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282472|gb|EEV12605.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285148|gb|EEV15265.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314541|gb|EFB44928.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317837|gb|EFB48206.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322788|gb|EFB53108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325976|gb|EFB56282.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328288|gb|EFB58563.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331982|gb|EFB61491.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596501|gb|EFC01461.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283791203|gb|EFC30013.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921301|gb|EFD98359.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096326|gb|EFE26586.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467849|gb|EFF10359.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295129027|gb|EFG58656.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575469|gb|EFH94186.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312436421|gb|ADQ75492.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193851|gb|EFU24245.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|295102463|emb|CBL00008.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 901

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 51/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +    + G  +            I     N TG +H+GH     + D L   
Sbjct: 9   DPSQVEDRIYQFWLDGGCFHTKADPDKKPYTIVMPPPNVTGQLHMGHAVDNTMQDILIRT 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ +  E 
Sbjct: 69  KRMQGY---------------------------AALWVPGTDHASIATEAKVVEAMRAEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W    K          I   LK L    D          G    +
Sbjct: 102 LTKEMVGRDGFLERAWAWKTK------YGNRIVSQLKKLGSSCDWERERFTMDEGCSEAV 155

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y G
Sbjct: 156 KEVFVRLYDKGLIYRG 171


>gi|297587610|ref|ZP_06946254.1| glutamate--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574299|gb|EFH93019.1| glutamate--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 493

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 105/298 (35%), Gaps = 48/298 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  L  +      +  R  Y++ A   I  L  
Sbjct: 13  APSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRI-----EDTDRTRYVDGA---IENLLE 64

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIV 233
            + W      +  + +++  + E    G Y++   V + L  KY  EL+      +    
Sbjct: 65  QLKWAGLDPDEGVVLDDEGKVTEVGECGPYVQSDRVKQGLYQKYIDELIEKGY-AYYCFC 123

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  +    + D   L  ++D         RG    I D    +A  G  Y   L  
Sbjct: 124 SKERLDQVKAQQKAD--GLMPKYDGLC------RGIS--IEDAKKRIA-NGEEYVIRLKL 172

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P++K     D  + ++ F +    D  D+ L+KSDG  TY     A     +  G  ++ 
Sbjct: 173 PENKEITFNDAIKGKITFNTN---DMDDQVLIKSDGFPTYHF---AVVVDDHLMGITHI- 225

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            V G +      +   +         +   L    V L + G   K+SKR  D     
Sbjct: 226 -VRGDEWISSTAKHVYMYQCFGWDVPEFVHL---PVVLNKSGK--KLSKRNDDVAVKD 277


>gi|156973299|ref|YP_001444206.1| isoleucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166229779|sp|A7MTD6|SYI_VIBHB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|156524893|gb|ABU69979.1| hypothetical protein VIBHAR_00980 [Vibrio harveyi ATCC BAA-1116]
          Length = 942

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 107/324 (33%), Gaps = 40/324 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            V  + A   +  L +    +W+P      ++ M        I R     + I   +   
Sbjct: 427 FVSMDQAGLRAKALESIKNVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 486

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H      I  +   +  +G           +      D D+ + +  +  V  D  
Sbjct: 487 TAELHPNTLELIEKVAKLVEEKGI---QAWWDVDAAELLGADADQYEKVLDTLDVWFDS- 542

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
                  G   +   D      + E   ++  +Y+ GSD   G+ +     + A+ ++  
Sbjct: 543 -------GVTHFSVVDA-----REEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAP 590

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +    
Sbjct: 591 YKQVLTHGFVV---DGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS- 646

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ ++S +        AY R R+  R         + +    +++P E         + 
Sbjct: 647 DEILKRSAD--------AYRRIRNTARFFLANLSGFNPE---TDIVPVEEMVALDRWAVG 695

Query: 500 VHLAEYPRVIENATIAQEPYKLAF 523
             LA    ++  A      + +  
Sbjct: 696 RALAAQEEIV-KAYEEYNTHGVTQ 718


>gi|47458840|ref|YP_015702.1| glutamyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|67461766|sp|Q6KIT3|SYE_MYCMO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|47458168|gb|AAT27491.1| glutamyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 464

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 97/299 (32%), Gaps = 46/299 (15%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIN 168
            K T++   + + +PTG +H+G  R A+          GD +  +               
Sbjct: 1   MKKTRIRTRY-APSPTGYLHIGGARTALFNYLFAKHFNGDFIVRIED----TDIARNVAG 55

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
              +Q++ L           +Y ++S        G Y +    +  ++    LL      
Sbjct: 56  GEESQLDNLEWL-------QIYPDESPKNPNEKYGKYRQSEKLDRYNEIVEILLKKGL-- 106

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                K Y     ++  R +  A  I           +  +   I D           Y 
Sbjct: 107 ---AYKAYDTTYELEKQRAEQIAKGI-------FSFRYDRNWLKISDEEIKKREVEQTYS 156

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
             +  PK+   +  D+ R  +   S  +GD     ++KSD   TY   + A     ++  
Sbjct: 157 IRIALPKNHDYEWNDLVRGLIKVNSEDIGDW---VIIKSDKYPTY---NFAVVVDDFDMQ 210

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +++   G +H     +  AV  A+   K          + L  +   +K+SKR    
Sbjct: 211 ISHVLR--GEEHITNTPKQLAVYEAMGWDKPVFGH-----LTLITNSKGVKLSKRDDSV 262


>gi|313206336|ref|YP_004045513.1| glutamyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445652|gb|ADQ82007.1| glutamyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023202|gb|EFT36213.1| Glutamyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336220|gb|ADZ12494.1| Glutamyl- and glutaminyl-tRNA synthetase [Riemerella anatipestifer
           RA-GD]
          Length = 503

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 90/277 (32%), Gaps = 20/277 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D+   +      +    +  
Sbjct: 9   APSPTGALHLGGVRTALYDYLFA---KHHGGDFVLRIEDTDSARYVEGAEEYIMEALEWC 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G     Y +   + + D+Y+ ++L             +     +  IR +
Sbjct: 66  GIVPDESPKHGGPYAPYRQSERRAIYDQYTDQILKTD-----YAYIAFDTPEELDAIRKE 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            ++               R   S  ++ ++ L  +   Y      P  +     D+ R  
Sbjct: 121 FESRGEVFAYNYRTRGRLRNSISLPKEEVEQLLAENTPYVVRFKMPVDRIVSLKDIIRGD 180

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
               +  +    D+ L+K+DG  TY  A++      +E    ++I   G +    +    
Sbjct: 181 FSVNTNDLD---DKVLVKNDGMPTYHFANI---IDDHEMKITHVIR--GEEWLPSMALHI 232

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            +  A+     +   L   L    +     K+SKR G
Sbjct: 233 LLYEAMGWDAPEFAHLSLILKPEGKG----KLSKRDG 265


>gi|302332203|gb|ADL22396.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F    +    DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFN---ISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|281492830|ref|YP_003354810.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376482|gb|ADA65968.1| Valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 880

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +        +    +  +        +I     N TG +H+GH     + D + 
Sbjct: 8   KFNPTEVEAGRYEKWLEADVFKPSGNPDAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++             ++   ++   +   A    D  LP+             
Sbjct: 68  RQKRMQGFDTL-------WLPGMDHAGIATQAKVA-ARLAEDGILPQD-LGREKFLDKVW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+Y++                         I++    + I  D          G   
Sbjct: 119 EWKDEYATT------------------------IKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 272 PIRDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R +   L  +G++Y G   I   PK+ T     +    +     +  T   +  D  +
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYHITYQIEGSDEFV 214

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +      F  D A    + +  + +++
Sbjct: 215 EIATTRPETFLGDTAVIVNEKDERYKHLV 243



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 28/195 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+++ G+D++R+ +       + + F + K+       
Sbjct: 512 LIRDEEGRKMSKSLGNGIDPMDVIEKYGTDALRWFLSNGSAPGQDVRFSYDKMDAAWN-- 569

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
             F  +      R I   A+D+  D       +             +     L      +
Sbjct: 570 --FINKIWNVS-RYILMNAEDVSADAVSSALTKVANKTAGNVTDRWI-----LTRLNDTV 621

Query: 510 ENATIAQ-------EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           E  T            + L  +++D    F   +    E  +      +  +  + R  L
Sbjct: 622 ERVTEQMDKFEFGVAGHILYNFIWD---EFANWY---LELTKEVMFGEDEAEKDITRAVL 675

Query: 563 VHAVASIINSGLNII 577
           +H    +++  L ++
Sbjct: 676 LH----VLDQVLRLL 686


>gi|253730957|ref|ZP_04865122.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725307|gb|EES94036.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F    +    DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFN---ISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|57651372|ref|YP_185421.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|88194248|ref|YP_499040.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220665|ref|YP_001331487.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|221142318|ref|ZP_03566811.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258452829|ref|ZP_05700824.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049975|ref|ZP_06022834.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282925564|ref|ZP_06333217.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023499|ref|ZP_06377897.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|304380506|ref|ZP_07363183.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81695187|sp|Q5HII6|SYM_STAAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57285558|gb|AAW37652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87201806|gb|ABD29616.1| methionyl-tRNA synthetase, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150373465|dbj|BAF66725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257859515|gb|EEV82368.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259161910|gb|EEW46493.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940061|emb|CBI48437.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592468|gb|EFB97480.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|302750380|gb|ADL64557.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340951|gb|EFM06874.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320139424|gb|EFW31302.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|329313208|gb|AEB87621.1| Methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729770|gb|EGG66167.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F    +    DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFN---ISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|329850466|ref|ZP_08265311.1| valyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840781|gb|EGF90352.1| valyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 901

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +   L  +      +      K    +I     N TG +HVGH     + D L 
Sbjct: 5   TFDPAAVEPRLYQMWEKSGVFAPIDDPKAETFSIVIPPPNVTGNLHVGHALNNTLQDVLT 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V +
Sbjct: 65  RFERMRGKAALWLPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA   +    +   E ++  V ++  ++   I+R  L+ L    D          G  +
Sbjct: 94  QLAAAGNIGRRDMGREAFVAKVWEWKAESGGNIVRQ-LRRLGASCDWSRERFTLDEGLSA 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L R G +Y            Q    D +
Sbjct: 153 AVRKVFVQLHRDGLMYRDKRLVNWDPQFQTAISDLE 188



 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 84/264 (31%), Gaps = 41/264 (15%)

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV--------GKELADKYSSELLN--- 223
             +A +    + +A+      +P G   GV ++            ELA +    + +   
Sbjct: 336 AIVARAEEEGWLKAIEKTRHMVPHGDRSGVVIEPFLTDQWYVNAGELAKEAVRAVEDGRT 395

Query: 224 -FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
            F  + W     ++        +   L     +   +   D     + S    +     +
Sbjct: 396 VFEPKSWEKTYFEWMRNIEPWCVSRQLW-WGHRIPAWYGPDGTIFVEMSEADAL-----K 449

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
               + G   P K             L   STM   D    L +   ++T          
Sbjct: 450 AAQAHYGKATPLKQDEDVLDTWFSSALWPFSTMGWPDKTDDLKRFYPTHTLIT------- 502

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                GFD +I+         V R+  +    + +     V +  LV   RD    KMSK
Sbjct: 503 -----GFD-IIFFW-------VARMMMMGLHFTGEAPFKRVFINALV---RDEKGQKMSK 546

Query: 403 RAGDFITLRHVVDEVGSDSVRFMM 426
              + +    ++DE G+D++RF M
Sbjct: 547 SKNNVMDPLVLIDEFGADALRFTM 570


>gi|323438722|gb|EGA96462.1| methionyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442066|gb|EGA99701.1| methionyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 657

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MVLDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|315640002|ref|ZP_07895129.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484264|gb|EFU74733.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 669

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 118/351 (33%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEKKADEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  + L+   +K++    DY  +A+ KI +  L  
Sbjct: 66  -------GVTPQEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHQKAVKKIFQQLLDQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   Q++ + S  D      + + ++  +          ++        +   +  + 
Sbjct: 117 GDIYLGQYEGWYSISDEEYFTETQLAEVYKDEEGN------VIGGKAPSGHEVELVKEES 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKY------ 345
             FR +      DR L   D    +                    DLA  +  +      
Sbjct: 171 YFFRMSKY---ADRLLAYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTHSWGIPV 227

Query: 346 ERGFDNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
           +    +++YV              GSD     ++   A    V ++  + + +   ++ +
Sbjct: 228 DANPKHVVYVWIDALSNYISALGYGSDDDQLFQKYWPADVHMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                                KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 288 ALGLPLPKEVYGHGWLLMKEGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|295694735|ref|YP_003587973.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410337|gb|ADG04829.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 684

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 100/337 (29%), Gaps = 59/337 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A      GY+V            +         +  +    
Sbjct: 15  PSNKLHIGHAYTTVAADAMARYKRLRGYDV------------MYLTGTDEHGQKIERRAR 62

Query: 192 NDSDLPEGYYPGVY--LKHVGKELADKYSSELLNFPEEKWLPIVKDY-SVQAMMKIIRDD 248
            +   P+ +   +   ++ + ++L   Y   +          + + +  +     I + D
Sbjct: 63  EEGKTPQAFVDEIVGWIQELWRKLDISYDDFIRTTEPRHKKAVQRIFQRLMEQGDIYQAD 122

Query: 249 LKALNIQHDIFIS---------------------EDDFHRGDPSPIRDIIDNLARQGYVY 287
            + L                              E  +       +  ++          
Sbjct: 123 YEGLYCTPCESFWTARQAEGGRCPDCGRPVELVREKSYFFRMSKYVPQLLRYYEENPEFI 182

Query: 288 E------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA----- 336
           +       ++        +   + R    +   + GD      +  D    Y  A     
Sbjct: 183 QPESRKHEMINNFIKPGLEDLCVSRTTFDWGIPVPGDPDHVIYVWIDALSNYITALGYLS 242

Query: 337 DLAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           D    + K++R +   + V+G +    H+ Y      +  A+     +  V     +   
Sbjct: 243 DDPAEREKFDRYWPADVQVVGKEIVRFHTIY---WPIMLIALGLPLPK-KVFGHGWLLTP 298

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +     KMSK  G+ I    ++D  GSD++R+ +L  
Sbjct: 299 QG----KMSKSKGNVIDPNLLLDRYGSDAIRYFLLRE 331


>gi|125625212|ref|YP_001033695.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124494020|emb|CAL99020.1| ValS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300072022|gb|ADJ61422.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 880

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +        +    +  +        +I     N TG +H+GH     + D + 
Sbjct: 8   KFNPTEVEAGRYEKWLEADVFKPSGNPDAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++             ++   ++   +   A    D  LP+             
Sbjct: 68  RQKRMQGFDTL-------WLPGMDHAGIATQAKVA-ARLAEDGILPQD-LGREKFLDKVW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+Y++                         I++    + I  D          G   
Sbjct: 119 EWKDEYATT------------------------IKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 272 PIRDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R +   L  +G++Y G   I   PK+ T     +    +     +  T   +  D  +
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYHITYQIEGTDEFV 214

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +      F  D A    + +  + +++
Sbjct: 215 EIATTRPETFLGDTAVIVNEKDERYKHLV 243



 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 32/242 (13%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKR 403
           ++R F     V G D   +      +  ++    K+  + +L     L RD    KMSK 
Sbjct: 468 FKRYFPTSTLVTGYD-IIFFWVSRMIFQSLEFTGKSPFHNVLIHG--LIRDEEGRKMSKS 524

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            G+ I    V+++ G+D++R+ +       + + F + K+         F  +      R
Sbjct: 525 LGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN----FINKIWNVS-R 579

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ------ 516
            I   A+D+  D       +             +     L      +E  T         
Sbjct: 580 YILMNAEDVSADAVSSALTKVANKTAGNVTDRWI-----LTRLNDTVERVTEQMDKFEFG 634

Query: 517 -EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
              + L  +++D    F   +    E  +      +  +  + R  L+H    +++  L 
Sbjct: 635 VAGHILYNFIWD---EFANWY---LELTKEVMFGEDEAEKDITRAVLLH----VLDQVLR 684

Query: 576 II 577
           ++
Sbjct: 685 LL 686


>gi|15674155|ref|NP_268330.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537370|sp|Q9CDP6|SYV_LACLA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12725235|gb|AAK06271.1|AE006446_3 valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 880

 Score = 50.7 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +        +    +  +        +I     N TG +H+GH     + D + 
Sbjct: 8   KFNPTEVEAGRYEKWLEADVFKPSGNPDAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++             ++   ++   +   A    D  LP+             
Sbjct: 68  RQKRMQGFDTL-------WLPGMDHAGIATQAKVA-ARLAEDGILPQD-LGREKFLDKVW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+Y++                         I++    + I  D          G   
Sbjct: 119 EWKDEYATT------------------------IKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 272 PIRDIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R +   L  +G++Y G   I   PK+ T     +    +     +  T   +  D  +
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYHITYQIEGSDEFV 214

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +      F  D A    + +  + +++
Sbjct: 215 EIATTRPETFLGDTAVIVNEKDERYKHLV 243



 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 66/442 (14%), Positives = 131/442 (29%), Gaps = 68/442 (15%)

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +++     +N+ G               +A     +DL E     V +K V  E+     
Sbjct: 290 HDLPMINMMNNDGTINENGGKYEGLDRFEARKQIVADLKELG-QLVDIKPVRHEVGHSER 348

Query: 219 SELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           + ++  P    +W   + + +  A+     +D                        I   
Sbjct: 349 TGVVVEPRLSTQWFVKMDELAKNAIANQTTEDAVEFYPPRFNDTFMQWMENVHDWVISRQ 408

Query: 277 I-------DNLARQGYVYEGILPPPKSKTTQKCDMDR----KQLL-FRSTMVGDDVDRPL 324
           +             G +Y G   P     TQ  D+        L  F +    D+     
Sbjct: 409 LWWGHQIPAWYNEAGEMYVGEEAPEGEGWTQDEDVLDTWFSSALWPFSTMGWPDENSADF 468

Query: 325 LKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           ++   + T     D+ +F          MI+      S                K+  + 
Sbjct: 469 IRYFPTSTLVTGYDIIFFWVS------RMIF-----QSLEFT-----------GKSPFHN 506

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           +L     L RD    KMSK  G+ I    V+++ G+D++R+ +       + + F + K+
Sbjct: 507 VLIHG--LIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKM 564

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                    F  +      R I   A+DI  D       +             +     L
Sbjct: 565 DAAWN----FINKIWNVS-RYILMNAEDISADAVSSALTKVANKTAGNVTDRWI-----L 614

Query: 503 AEYPRVIENATIAQ-------EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
                 +E  T            + L  +++D    F   +    E  +      +  + 
Sbjct: 615 TRLNDTVERVTEQMDKFEFGVAGHILYNFIWD---EFANWY---LELTKEVMFGEDEAEK 668

Query: 556 TMMRLQLVHAVASIINSGLNII 577
            + R  L+H    +++  L ++
Sbjct: 669 DITRAVLLH----VLDQVLRLL 686


>gi|257463874|ref|ZP_05628260.1| glutamyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 408

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 95/286 (33%), Gaps = 46/286 (16%)

Query: 128 VSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           ++ +PTG  HVG    A+          GD +  +      E T +    D   Q+  + 
Sbjct: 9   IAPSPTGDPHVGTAYIALFNLAFANHNGGDFILRI------EDTDQNRYTDGSEQM--IF 60

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            ++ W     +   D     G   G Y +    +L  KY+ EL+      +        +
Sbjct: 61  DALHWLGLDYVEGPDV----GGDYGSYRQSERFDLYVKYAKELVEKGG-AYYCFCTSERL 115

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             + +  +   KA                   S  ++ I+     G  Y   L  P    
Sbjct: 116 DHLRERQKAMGKAPGYDGHC-----------RSLTKEEIEEKLAAGEPYVIRLKMPYEGE 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  R  ++F +  +    D+ LLK+DG  TY    LA     +  G  ++I     
Sbjct: 165 TVIHDRLRGDIVFENNKID---DQVLLKADGFPTYH---LANVVDDHLMGITHVIR--AE 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 217 EWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNSDRTKISKRK 257


>gi|15644113|ref|NP_229162.1| isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6226709|sp|P46213|SYI_THEMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4981921|gb|AAD36431.1|AE001790_3 isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 919

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 76/227 (33%), Gaps = 37/227 (16%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAV 370
           RS     D     + S  S+ Y          + +  F   +Y+ GSD   G+      +
Sbjct: 515 RSFEKMLDTLDVWIDSGASFEYITTK------REDHPFPLDMYLEGSDQHRGWFHSSIFL 568

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A A         VL    +   +D    KMSK  G+ +    VV++ G++ +R  +    
Sbjct: 569 AVAKRGSAPYKEVLTHGFI---KDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSD 625

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               +      V++Q++          Y + R+ FR       D D +L   + +P E  
Sbjct: 626 YFNDIKISMRIVEQQTE---------VYRKIRNTFRFLLGNLEDFDPEL---DRVPHEKL 673

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                  L         +I+ AT   +      Y       F   ++
Sbjct: 674 LTIDRWAL----GRLQEIIKRATEYYD-----SY------EFSKVYN 705


>gi|304373118|ref|YP_003856327.1| Glutamyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309309|gb|ADM21789.1| Glutamyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 486

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 45/293 (15%)

Query: 129 SANPTGPMHVGHCRCAV---------VGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+         +GD +  +             +    +Q++ L  
Sbjct: 22  APSPTGYLHIGGARTALFNYLFAKHFLGDFVLRIED----TDVARNVVGGEKSQLDNLLW 77

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++    E    G Y +    +   +Y         +K   +  D   +
Sbjct: 78  L-------GIIPDEYPTKENSKYGFYRQ---SQKLKRYWDLAHQLIAQKKAYLAFDSPEE 127

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++    + K +             +  +   I         +   +   L   K+K  
Sbjct: 128 IQLQKQEQEKKGI---------FSFRYDRNWLKISQQEKLKRFKNKQFSVRLALEKNKEY 178

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  +   S  +GD     ++KSDG  TY   + A     ++    +++   G +
Sbjct: 179 AWNDIVRGPIKVNSNDIGDW---VIIKSDGYPTY---NFAVVVDDHDMEITHVLR--GEE 230

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +  AV  A +             + +  D    K+SKR         
Sbjct: 231 HISNTPKQLAVYDAFNWNHPHFGH-----LTIITDQNGKKLSKRDKSLFQFIE 278


>gi|225571222|ref|ZP_03780220.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
           15053]
 gi|225160053|gb|EEG72672.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
           15053]
          Length = 630

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 57/419 (13%), Positives = 128/419 (30%), Gaps = 58/419 (13%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSRGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ +     ++         +  +     DK+      + E++   I K   
Sbjct: 61  AEEAGVTPKEFVDGVAGEI-------RRIWDLMNTSYDKFIRTTDGYHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q    I +   + +     + F +E     G        +     + Y ++      + 
Sbjct: 114 DQG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRL 171

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD-- 350
                   +  Q + R   + ++   P             DL   +  ++ G    FD  
Sbjct: 172 IDHINSHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDPE 221

Query: 351 NMIYVM---------------GSDHSGYVKR-LEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +++YV                G D++   ++   A    + +   + + +   +  +  D
Sbjct: 222 HVVYVWLDALTNYITGIGYDCGGDNTEQFRKDWPADLHLIGKDIIRFHTIYWPIFLMALD 281

Query: 395 G--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                             KMSK  G+ +    +VD  G D+VR+ +L            +
Sbjct: 282 LPLPKQIFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISW 341

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             + E+   +    +     R  S+  +       D          +   +E     ++
Sbjct: 342 ELMVERMNSDLANTLGNLVNRTISMTNKYFGGTVTDKGVAGEADADLKAMTESAPKAVE 400


>gi|313635219|gb|EFS01522.1| methionyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 665

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 110/336 (32%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLKHVGKEL---ADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++          +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P               +   S           +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSN----PKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMIFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|329766872|ref|ZP_08258400.1| glutamyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837597|gb|EGF87222.1| glutamyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 487

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 108/302 (35%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +   + ++  +E               
Sbjct: 9   APSPTGNLHIGNARTALFNYLFAKHYGGDFVLRI-EDTDFKRNKE------------EGE 55

Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               +Y   L  + D  + +    G Y +    ++  KY+ +L+   +     +  +   
Sbjct: 56  RSQLKYMDWLGLDYDEGIGKEKEFGPYRQSERIDIYQKYADQLIAEDKAYKCYMTAEELE 115

Query: 239 QAMMKIIRDDL-KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               + I + L    + +H     E+          ++  +   R+  +    +  P+ +
Sbjct: 116 AEREEQIANGLPPRYSGKHAHLTKEE----------QEAFEKEGRKPSIR---IRVPQDR 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T +  DM + +L F     GD     ++K+DG  TY   + A     +     +++   G
Sbjct: 163 TYKFDDMVKGELSFEGHDFGDF---VIVKNDGVATY---NFAVAIDDHLMQISHVLR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   V  A+  +  +   +      L  +    K+SKR    I      DE+
Sbjct: 215 DDHVSNTPKQLVVYEALGFEPPRFGHM-----TLIVNENKKKLSKRDETIIQFIEQYDEL 269

Query: 418 GS 419
           G 
Sbjct: 270 GY 271


>gi|310643589|ref|YP_003948347.1| valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
 gi|309248539|gb|ADO58106.1| Valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
          Length = 888

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 69/269 (25%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +      +    +      +     I     N TG +H+GH     + D + 
Sbjct: 15  TYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLHIGHALDFTLQDIII 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                                   LP   + G+  +   +
Sbjct: 75  RAKRMQGYDAL--------------------------------WLPGADHAGIATQTKVE 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++     +  I +  + +    D          G   
Sbjct: 103 QKLREEGLTRYDLGREKFLEKVWEWK-DLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSK 161

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L ++G +Y G          +    D +            +  PL    G  
Sbjct: 162 AVREVFVKLYKKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFI 221

Query: 332 TYFAA-------DLAYFKCKYERGFDNMI 353
           T           D A      +  +  MI
Sbjct: 222 TVATTRPETMLGDTAVAVHPEDERYKQMI 250



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 41/220 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           W+  V+D+ +   +         +   +D    E      DP+ + +           Y 
Sbjct: 403 WIENVRDWCISRQLWWG----HRIPAWYDEETGEVIVSAEDPTTLPE-----------YA 447

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G                   L   ST+   +    L +      Y+  ++         G
Sbjct: 448 GRKLKQDEDVLDTWFSS--ALWPFSTLGWPEQTEDLKR------YYPTNV------LVTG 493

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D +IY         V R+   A   +E+    +VL+  LV   RD    KMSK  G+ +
Sbjct: 494 YD-IIYFW-------VSRMIFTALEFTEEIPFKDVLMHGLV---RDADGRKMSKSLGNGV 542

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
               V+++ G+D++R+M+       + L F + +V++   
Sbjct: 543 DPLDVIEQYGTDAMRYMISTSSTPGQDLRFRWERVEQARN 582


>gi|304412576|ref|ZP_07394181.1| isoleucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303592|ref|ZP_07583345.1| isoleucyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304349052|gb|EFM13465.1| isoleucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912490|gb|EFN42913.1| isoleucyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 940

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 114/327 (34%), Gaps = 41/327 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSY 331
           +  +   + +QG                  D+D  +LL         V   L +  D   
Sbjct: 496 MERVASRIEQQG-------------IQAWWDLDAAELLGDEAEQYRKVTDTLDVWFDSGS 542

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL      
Sbjct: 543 T-FSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF-- 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +S +  
Sbjct: 598 -TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNRSAD-- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R    +  +L+     ++++  E         ++   A   + I 
Sbjct: 654 ------AYRRIRNTAR---FLLANLNGFEPAKDLVAVEDMVALDRW-VVRRAAALQQEII 703

Query: 511 NATIAQEPYKLAFYLYDLAS-VFHGHW 536
            A      + +   L    S      +
Sbjct: 704 EAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|294139600|ref|YP_003555578.1| valyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326069|dbj|BAJ00800.1| valyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 971

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQSWEEKGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   +K++  + D+  ++   I +  L+ L    D          G   
Sbjct: 93  KLEAEEGKTRHDLGRDKFIDKIWDWKEESGGTITKQ-LRRLGASVDWDRERFTMDEGMSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLE 187


>gi|290890940|ref|ZP_06554004.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
 gi|290479339|gb|EFD87999.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
          Length = 902

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 34/212 (16%)

Query: 95  PSYLRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             + ++ L +  V    +  +   G+    +I     N TG +H+GH     + D L   
Sbjct: 21  DHWQQEELFNPDVDKKLKPAKYADGQPEAYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQ 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+             ++   ++   + +  L  +          G+    +G+E 
Sbjct: 81  KRMQGYDTL-------WLPGLDHAGIATQAKVEARLRED----------GISRYDLGRE- 122

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+  ++L + +E                II++    + +  D         +G    +
Sbjct: 123 --KFVDKVLQWKDE-------------YASIIKEQWAKMGLSLDFSRERFTLDKGLNEAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L ++G +Y G          +    D
Sbjct: 168 RKVFVDLYKKGLIYRGEYIINWDPQARTALSD 199



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 96/281 (34%), Gaps = 53/281 (18%)

Query: 245 IRDDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             D  +        ++       G   P+  RD  +        Y G+  P     TQ  
Sbjct: 407 FEDTYQTWMNNIHDWVISRQLWWGHRIPAWYRDTKEGEKE---TYVGLTAPKGDGWTQDP 463

Query: 303 DMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           D+        L   ST+   D +     SD    Y  + +         G+D +I+    
Sbjct: 464 DVLDTWFSSALWPFSTLGWPDTNN----SDYKRFYPTSTMVT-------GYD-IIFFW-- 509

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
                + R+   A   +  +   NVL+  L+   RD    KMSK  G+ I    V+++ G
Sbjct: 510 -----ISRMIFQAKEFTGTRPFKNVLIHGLI---RDSKGRKMSKSLGNGIDPMDVINKYG 561

Query: 419 SDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           +D++R+ +       + L+F   K+              A+     I+  ++ +  +L+ 
Sbjct: 562 TDALRWFLSTGSTPGQDLNFSNDKMDS------------AWNFINKIWNVSRYVLMNLET 609

Query: 478 DLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQ 516
           D        +    D + L L     L+     IEN T   
Sbjct: 610 D-------TKIELPDRNLLALADKWILSRLNSTIENVTKNF 643


>gi|317126779|ref|YP_004093061.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471727|gb|ADU28330.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 656

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 58/335 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY+V      ++ G +I         R  +    
Sbjct: 17  PSDKLHIGHAYTTVAGDAMARYKRLRGYDVMFLTGTDEHGQKIE--------RKAEDKGV 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +     +       +K +  +L   Y   +    E     + K +        I  D + 
Sbjct: 69  SPQQFVDDIVKT--IKSLWSKLDISYDDFIRTTEERHKKVVQKIFDQLLQQGDIYLD-QY 125

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             +      S    ++       D    ++ +  + Y +       +     + + D  Q
Sbjct: 126 EGLYCTPCESFFTDYQAKDGKCPDCSRPVEKVQEESYFFRMSKYADRLLKYYEENPDFIQ 185

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM------ 356
              R   + ++  +P             DLA  +  ++ G       ++++YV       
Sbjct: 186 PESRKNEMINNFIKP----------GLEDLAVSRTSFDWGINVKSNPEHVVYVWIDALSN 235

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                     D + Y K   A    V ++  + + +   ++ +  D              
Sbjct: 236 YITALGYGSDDETLYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGHGWLL 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ +    +++  G D++R+ +L  
Sbjct: 296 MKDGKMSKSKGNVVDPVPLIERYGLDALRYYLLRE 330


>gi|197117918|ref|YP_002138345.1| valyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197087278|gb|ACH38549.1| valyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 888

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 58/195 (29%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +  N+       +I     N TG +H+GH     + D L    
Sbjct: 12  PKSVEERWYQQWEQKGYFHANVPSDKPGYSIVIPPPNITGVLHMGHALNNTLQDILCRWK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +GY V                           L+   +D        V  + +  E  
Sbjct: 72  RMAGYNV---------------------------LWMPGTDHAGIATQNVVERQLAAEGK 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++         E ++  V  +  ++  +II   LK L    D          G    +R
Sbjct: 105 DRF-----ELGREAFIERVWQWKGESGGQIIGQ-LKRLGASCDWERERFTMDAGLSKAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++   L ++  +Y  
Sbjct: 159 EVFVRLYQEKLIYRD 173


>gi|153002892|ref|YP_001377217.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152026465|gb|ABS24233.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 947

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 17/183 (9%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A    K   G    +Y+ GSD   G+       + A         VL    V    DG  
Sbjct: 578 AAVAEKRGLGVPVDLYLEGSDQHRGWFHSSLLTSVATRAHAPYRAVLTHGFV---LDGQG 634

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
             MSK  G+ +    ++ + G+D +R  +      + +      V   ++          
Sbjct: 635 KAMSKSLGNTVAPDEIIKKYGADILRLWVSASDYRDDVRISSEIVSGLAEG--------- 685

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           Y + R+  R         D     R+ +P +         L   LA +   ++ A    E
Sbjct: 686 YTKIRNTVRYMLGALDGFDPS---RDAVPLDELEPLDRWALAK-LAAWDEKVKAAYEEYE 741

Query: 518 PYK 520
            + 
Sbjct: 742 FHL 744


>gi|46198845|ref|YP_004512.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|61216249|sp|Q72KB0|SYC_THET2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46196468|gb|AAS80885.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 480

 Score = 50.7 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 82/476 (17%), Positives = 146/476 (30%), Gaps = 104/476 (21%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R  VV D L       GY+V     I D G                
Sbjct: 29  CGPTVYSDPHLGHARGPVVYDILRRYFLHKGYKVRFVSNITDVG---------------- 72

Query: 188 ALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L ++  +  +       L+ +   E+ADKY      F   + L +++          I 
Sbjct: 73  HLTDDADEGEDKIVRRAKLERLEPMEVADKY--MWSYFDAMQALNVLRPSIAPRASGHIP 130

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---KSKTTQKCD 303
           + L+         ++E    RG             R+G VY  +   P   K    +  +
Sbjct: 131 EMLE---------LTERLLARGHAY---------ERKGSVYFRVRSFPEYGKLSGKRLEE 172

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS--------------DGSYTYFAADLAYFKCKYERGF 349
           +     +       D +D  L K+              +G   +     A        GF
Sbjct: 173 LRAGARVEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGF 232

Query: 350 DNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D  ++  G D    + +   A A A   + A+  +    ++         KM+K  G+ +
Sbjct: 233 D--LHAGGIDLQFPHHECEIAQAEAAGFRFARHWMHHNHVL-----LEGEKMAKSTGNLV 285

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L  +++     ++RF +L       +DF +  ++   +      + +AY   R   + A
Sbjct: 286 LLHDLLEAHEPMALRFYLLQTHYRSPMDFTWEGLESAKRG--YGRLLHAYREVRGRKKTA 343

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                       P      E   D  E         +   IE+      P         L
Sbjct: 344 P-----------PGTTPELERALDALEKA-------FMEAIED--DLSTP-------EAL 376

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A++F          P L  +    +  ++ R     AV   +  G  I+G+  P  
Sbjct: 377 AALF-------AFLPELHKLLPEAKAESLAR---AEAVFHTLGEG--ILGL-FPER 419


>gi|330723256|gb|AEC45626.1| glutamyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 481

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 45/293 (15%)

Query: 129 SANPTGPMHVGHCRCAV---------VGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+         +GD +  +             +    +Q++ L  
Sbjct: 17  APSPTGYLHIGGARTALFNYLFAKHFLGDFVLRIED----TDVARNVVGGEKSQLDNLLW 72

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++    E    G Y +    +   +Y         +K   +  D   +
Sbjct: 73  L-------GIIPDEYPTKENSKYGFYRQ---SQKLKRYWDLAHQLIAQKKAYLAFDSPEE 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++    + K +             +  +   I         +   +   L   K+K  
Sbjct: 123 IQLQKQEQEKKGI---------FSFRYDRNWLKISQQEKLKRFKNKQFSVRLALEKNKEY 173

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  +   S  +GD     ++KSDG  TY   + A     ++    +++   G +
Sbjct: 174 AWNDIVRGPIKVNSNDIGDW---VIIKSDGYPTY---NFAVVVDDHDMEITHVLR--GEE 225

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +  AV  A +             + +  D    K+SKR         
Sbjct: 226 HISNTPKQLAVYDAFNWNHPHFGH-----LTIITDQNGKKLSKRDKSLFQFIE 273


>gi|197294279|ref|YP_001798820.1| valyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853606|emb|CAM11477.1| Valyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 856

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 36/200 (18%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
               +S   +      +     +     N TG +H+GH    V+ D L       G+EV 
Sbjct: 15  YQEWLSKNYFASVSTSRKKSFTVVIPPPNVTGKLHLGHAWNNVIQDILIRFKKMQGFEVL 74

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
               ++ AG            +  +     ++ L +      +LK+   E  +K+++   
Sbjct: 75  FLPGMDHAGI--------ATQKKVKEHLKKENLLNKDLDKATFLKY-AWEWKEKFATN-- 123

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                                 IR+  KAL +  D    +          ++D+   L  
Sbjct: 124 ----------------------IRNQWKALGLHLDYNFEKFTLDPDLSKTVQDVFIKLYH 161

Query: 283 QGYVYEG---ILPPPKSKTT 299
           QG +Y     I   PKSKT 
Sbjct: 162 QGLIYRDYKIINWDPKSKTA 181



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 355 VMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           V G D        + V  +  +++K    +VLL  L+   RD    KMSK  G+ +    
Sbjct: 472 VTGYD-ILTFWVSKMVLQSSFLTQKDPFKDVLLHGLI---RDNEGQKMSKSKGNGVDPLD 527

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           ++++ G D++RF ++       LD  + ++K ++  N
Sbjct: 528 IINKYGVDALRFFLITSAAPG-LDLLYDEIKVKNAWN 563


>gi|298207259|ref|YP_003715438.1| putative glutamyl-tRNA synthetase [Croceibacter atlanticus
           HTCC2559]
 gi|83849895|gb|EAP87763.1| putative glutamyl-tRNA synthetase [Croceibacter atlanticus
           HTCC2559]
          Length = 511

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 103/289 (35%), Gaps = 28/289 (9%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + F + +PTGP+H+G  R A+     A      G  + R   I D           
Sbjct: 3   QKVRVRF-APSPTGPLHIGGVRTALFNYLFAK--KHGGNFILR---IEDTDQNRYVEGAE 56

Query: 181 VFWRYQQALYN---NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            + +      N   ++    +  Y G Y +   K L  +Y+ +L++     +       S
Sbjct: 57  DYIKESLEWCNIPYDEGPGKDKGY-GPYRQSERKHLYKEYADQLISSG-HAYYAFDSAES 114

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A  K    + K     ++    E         P  ++   +A + YV       P+ +
Sbjct: 115 LDANRKSHEKNGKTF--IYNWHNREK-LDNSLTMPKEEVEKRIAAEDYVIR--FKSPQDE 169

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    D  R ++   + ++    D+ L KSDG  TY    LA     +     ++I   G
Sbjct: 170 TLYLDDEIRGEMTIDTNVLD---DKVLFKSDGMPTYH---LANIVDDHLMKITHVIR--G 221

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +    +     +  ++     +   L   +    +     K+SKR GD
Sbjct: 222 EEWLPSLALHVLLYRSLGWDAPKFAHLPLIMKPQGKG----KLSKRDGD 266


>gi|57167838|ref|ZP_00366978.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020960|gb|EAL57624.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 628

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 95/318 (29%), Gaps = 34/318 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ DTLA      G+E       ++ G +I   A       ++      S+ 
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNSTPKEYADKISSEF 75

Query: 197 PEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDLKALN 253
            + +        +     D ++   +     + W    I KD                  
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGHYCISCESFFAKSQ 135

Query: 254 IQHDI----------FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + ++            + E+ +          I+     Q Y  E  + P   K      
Sbjct: 136 LINECGCPDCGKDTSLLKEESYFFKLSKYQDKIL-----QWYDKEDPILPKNKKNELINF 190

Query: 304 MDRKQLLFRSTMVGDDVDRPL---LKSDGSYTYFAADLAYFKCK---YERGFDNM----- 352
           +         T    D    +   +K D    Y   D  +       Y+   +N      
Sbjct: 191 VQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYISSLDYQSQGENAKFWPA 250

Query: 353 -IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            I+++G D    + R  A+          + +        +      KMSK  G+ +  +
Sbjct: 251 HIHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPK 306

Query: 412 HVVDEVGSDSVRFMMLWR 429
            VVD  G ++ R+ +L  
Sbjct: 307 EVVDAYGLEAFRYFLLRE 324


>gi|307707754|ref|ZP_07644233.1| glutamyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616252|gb|EFN95446.1| glutamyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 486

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 99/298 (33%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y K + + L +  + +     EE      +
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERLDLYQKFIDQLLVEGKAYKSYVTEEELATERER 118

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G +    L   
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAERE-----------------AAGIIPTVRLAVN 161

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 162 ESGIYKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR 216

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 217 --GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|289433525|ref|YP_003463397.1| Methionyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169769|emb|CBH26305.1| metS [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313639884|gb|EFS04591.1| methionyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 665

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 110/336 (32%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 18  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDE 77

Query: 192 NDSDLPEGYYPGV-----YLKHVGKEL---ADKYSSELLNFPE------EKWLPIV-KDY 236
                 E +         +++          +K   +LL   +      E W  +  ++Y
Sbjct: 78  IAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYLGEYEGWYSVSDEEY 137

Query: 237 SVQAMMKIIRDDL-------KALNIQHDIFISEDDFHRGDPSPIRDIIDN---------- 279
             +  ++ +  D        KA +      + E+ +          +++           
Sbjct: 138 FTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILP 197

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P               +   S           +  D    Y  A L 
Sbjct: 198 ESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSN----PKHVVYVWIDALSNYITA-LG 252

Query: 340 YFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y      K+++ +   + ++G +    + R   +      ++       ++      L +
Sbjct: 253 YNTDNDTKFQKYWPADVQIVGKE----IVRFHTIYWPIMLMALDLPLPKMIFGHGWILMK 308

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 309 DG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 341


>gi|256819432|ref|YP_003140711.1| isoleucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581015|gb|ACU92150.1| isoleucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 1135

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 31/174 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A +V +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 643 GVDQTRGWFYTLHAIATSVFDSVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFTTIA 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D+ R+ M+   N  + L FD   V E  ++          F+  YA          
Sbjct: 700 EYGADATRWYMISNANPWDNLKFDLEGVAEVRRKFFGTLYNTYSFFALYANT-------- 751

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYK 520
             D F   + D+ P    P+   +  SEL  LI         ++      EP +
Sbjct: 752 --DSFTYAEADI-PLAERPEIDRWILSELNTLIKE-------VDALYADYEPTR 795


>gi|153215118|ref|ZP_01949825.1| isoleucyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114909|gb|EAY33729.1| isoleucyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 949

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ ++ + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVSPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|15612616|ref|NP_240919.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|25009402|sp|Q9KGK8|SYM_BACHD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10172665|dbj|BAB03772.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 660

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 111/351 (31%), Gaps = 79/351 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      GY V                 + +    +     
Sbjct: 17  PSDKLHIGHAYTTVAGDAMARYKRLRGYNV-----------------MYLTGTDEHGQKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  ++  +   + D +    +++ +          + +  +K+++   + 
Sbjct: 60  EQKAEAKGLTPKQFVDEIVSGIQDLWKKLDISYDD------FIRTTEERHIKVVQQIFEQ 113

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS--KTTQKCDMDRKQL 309
           L  Q DI++ + +     P         L  + Y  +G L   KS         +  +  
Sbjct: 114 LLDQGDIYLGDYEGWYSIPDETFYTETQLVDKEYDADGNLIGGKSPDSGHPVEKVREQSY 173

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYE------ 346
            FR +      DR L   + +  +                    DLA  +  +       
Sbjct: 174 FFRMSKY---ADRLLQFYEENPQFIQPESRKNEMINNFIKPGLEDLAVSRTSFTWGVPVP 230

Query: 347 RGFDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           R   +++YV              GSD    Y     A    V ++  + + +   ++ + 
Sbjct: 231 RDPKHVVYVWIDALSNYITALGYGSDQQEKYENYWPADVHLVGKEIVRFHTIYWPIMLMA 290

Query: 393 RD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 291 LDLPLPKKVFGHGWLLMKDGKMSKSKGNVVDPVPLIDRYGLDALRYYLLRE 341


>gi|126173298|ref|YP_001049447.1| isoleucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166229767|sp|A3D1G5|SYI_SHEB5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125996503|gb|ABN60578.1| Isoleucyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 940

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 114/327 (34%), Gaps = 41/327 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSY 331
           +  +   + +QG                  D+D  +LL         V   L +  D   
Sbjct: 496 MERVASRIEQQG-------------IQAWWDLDAAELLGDEAEQYRKVTDTLDVWFDSGS 542

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL      
Sbjct: 543 T-FSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF-- 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +S +  
Sbjct: 598 -TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNRSAD-- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R    +  +L+     ++++  E         ++   A   + I 
Sbjct: 654 ------AYRRIRNTAR---FLLANLNGFEPAKDLVAVEDMVALDRW-VVRRAAALQQEII 703

Query: 511 NATIAQEPYKLAFYLYDLAS-VFHGHW 536
            A      + +   L    S      +
Sbjct: 704 EAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|312875830|ref|ZP_07735820.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797311|gb|EFR13650.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 882

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L  + +    +   +        I     N TG +H+GH     + D L   
Sbjct: 6   NPKEVEDRLYKMWLEKKYFHAKIDYSKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRF 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                                    LP   +  +  +    E 
Sbjct: 66  KRMQGYCTL--------------------------------WLPGTDHASIATEAKIVEK 93

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +          EK+L    ++      +II + LK L    D          G  + +
Sbjct: 94  MKEEGLTKEMIGREKFLERAWEWKRVYGGRII-EQLKKLGASCDWDRERFTMDEGLSNAV 152

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y+G
Sbjct: 153 KEVFVRLYEKGLIYKG 168



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 37/247 (14%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF         +D +I+   +        + +    + ++  +  ++      + 
Sbjct: 466 TEDLKYFYPTDVLVTAYD-IIFFWVAR------MIFSGLEHMGKEPFKYVLIHG----IV 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPV 451
           RD    KMSK  G+ I    V+++ G+D++RF ++          F   KV+        
Sbjct: 515 RDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEANRNF--- 571

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                       I+  A+ +  +LD D    +  P ES+F  +E  ++  L    R +  
Sbjct: 572 ---------ANKIWNAARFMLMNLDID---TSFKPDESKFTFTERWILSRLDTLIREVTE 619

Query: 512 ATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
                E    A  LYD +   F   +    +         NN+++       V     ++
Sbjct: 620 NLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPILYNKEAENNKEVQY-----VLLT--VL 672

Query: 571 NSGLNII 577
            + L ++
Sbjct: 673 TNVLKLL 679


>gi|310659547|ref|YP_003937268.1| glutamyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826325|emb|CBH22363.1| glutamyl-tRNA synthetase [Clostridium sticklandii]
          Length = 495

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 108/293 (36%), Gaps = 40/293 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-------GAQINTLALSV 181
           + +PTG +H+G  R A+     A      G  V R   + D        GA    L+   
Sbjct: 8   APSPTGFVHIGSLRTALYNFLYAR--KMQGNYVLR---VEDTDRTRLVEGAVEGMLSAMN 62

Query: 182 FWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +      +  + ++D+ + +    G Y++    ++  ++   L++  +  +        +
Sbjct: 63  WAGVNHDEGVMLSDDNKVVQNGDCGPYIQSERLDIYKEHIKTLIDKGD-AYYCFCSRSRL 121

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             + +  ++  + L+ ++D    E           ++ I +   +G  Y   +  P++K+
Sbjct: 122 DRIREQQKN--EGLDPKYDGHCRELS---------QEEIQDKLDKGEDYVIRMKLPENKS 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ R ++   S    D  D+ L+K+DG  TY     A     +     ++I   G 
Sbjct: 171 ITFNDIVRGKV---SIHTSDMDDQVLIKADGFPTYHF---AVVVDDHMMDITHVIR--GE 222

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +      +   +      K     V L  ++   R     K+SKR GD     
Sbjct: 223 EWLTSTPKHVLLYQMFGWKAPTF-VHLPNILNADR----KKLSKRQGDVAVED 270


>gi|297582380|ref|YP_003698160.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140837|gb|ADH97594.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 662

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 120/351 (34%), Gaps = 79/351 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      G++V      ++ G +I           Q+A  N
Sbjct: 17  PSAKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIE----------QKAEEN 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             S       P  ++  +  ++ + +    +++ +  ++   +D   Q +  I    L+ 
Sbjct: 67  GKS-------PQQFVDDISSDIQELWKKLDISYDD--FIRTTEDRHKQVVQHIFERFLEQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS--KTTQKCDMDRKQL 309
            +I  D +  E  +   D +   ++   L  + Y   G +   KS         +  K  
Sbjct: 118 GDIYLDEY--EGWYSVSDETFYTEL--QLEDKEYDDNGNVTGGKSPDSGHPVEKVREKSY 173

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG---- 348
            F+ +      DR L   + +  +                    DLA  +  +  G    
Sbjct: 174 FFKMSKY---ADRLLAYYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFRWGVPVK 230

Query: 349 --FDNMIYVM-GS-------------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              ++++YV   +             ++  +     A    V ++  + + +   ++ + 
Sbjct: 231 SDPEHVVYVWIDALSNYITALGYSTDENGLFQSHWPADVHLVGKEIVRFHTIYWPIMLMA 290

Query: 393 RD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            D                  KMSK  G+ +    +++  G D++R+ +L  
Sbjct: 291 LDLPLPKKVFGHGWLLMKDGKMSKSKGNVVDPVPLIERYGLDALRYYLLRE 341


>gi|261380481|ref|ZP_05985054.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796729|gb|EFC52076.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 930

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 435 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 494

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 495 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 544

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 545 HYSV-----LKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 599

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 600 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 654

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 655 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 701


>gi|167383568|ref|XP_001736582.1| valyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165900944|gb|EDR27155.1| valyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 1048

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 63/238 (26%), Gaps = 39/238 (16%)

Query: 53  LSRPLGLDPLTIAE--LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV-VSG 109
           L +    +   I E   I        +   V        N   SP Y+ +         G
Sbjct: 55  LGKTKKENKKQIKEKEEIKFNKTNKGEKKKVIEPMP---N-TYSPKYVEEGWYEWWEKEG 110

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
                     G K  +     N TG +H+GH     + DT+       G E      ++ 
Sbjct: 111 FFKPEYSSKSGKKFVMVIPPPNVTGKLHLGHALTNSIQDTIVRYHRMKGDETLWVPGVDH 170

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG     +      R                  GV    +G+E           F EE W
Sbjct: 171 AGIATQVVVEKKLMRE----------------QGVTRHDIGRE----------KFLEEVW 204

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                    +   K I + L+ L    D               +++       +G +Y
Sbjct: 205 K------WKEEYGKGICNQLRRLGSSLDWSREVFTMDEKRGEAVKEAFCRFYEKGLLY 256


>gi|152999655|ref|YP_001365336.1| isoleucyl-tRNA synthetase [Shewanella baltica OS185]
 gi|166229768|sp|A6WKD4|SYI_SHEB8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151364273|gb|ABS07273.1| isoleucyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 940

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 114/327 (34%), Gaps = 41/327 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHSDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSY 331
           +  +   + +QG                  D+D  +LL         V   L +  D   
Sbjct: 496 MERVASRIEQQG-------------IQAWWDLDAAELLGDEAEQYRKVTDTLDVWFDSGS 542

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL      
Sbjct: 543 T-FSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF-- 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +S +  
Sbjct: 598 -TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNRSAD-- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R    +  +L+     ++++  E         ++   A   + I 
Sbjct: 654 ------AYRRIRNTAR---FLLANLNGFEPAKDLVAVEDMVALDRW-VVRRAAALQQEII 703

Query: 511 NATIAQEPYKLAFYLYDLAS-VFHGHW 536
            A      + +   L    S      +
Sbjct: 704 EAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|217974391|ref|YP_002359142.1| isoleucyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782433|sp|B8EFC7|SYI_SHEB2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217499526|gb|ACK47719.1| isoleucyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 940

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 114/327 (34%), Gaps = 41/327 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSY 331
           +  +   + +QG                  D+D  +LL         V   L +  D   
Sbjct: 496 MERVASRIEQQG-------------IQAWWDLDAAELLGDEAEQYRKVTDTLDVWFDSGS 542

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL      
Sbjct: 543 T-FSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF-- 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +S +  
Sbjct: 598 -TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNRSAD-- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R    +  +L+     ++++  E         ++   A   + I 
Sbjct: 654 ------AYRRIRNTAR---FLLANLNGFEPAKDLVAVEDMVALDRW-VVRRAAALQQEII 703

Query: 511 NATIAQEPYKLAFYLYDLAS-VFHGHW 536
            A      + +   L    S      +
Sbjct: 704 EAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|81427905|ref|YP_394904.1| glutamyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|115305769|sp|Q38YY5|SYE_LACSS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78609546|emb|CAI54592.1| Glutamyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 495

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 106/309 (34%), Gaps = 37/309 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     +  R    +   
Sbjct: 1   MAKNKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGTFVIRIEDTDTKR-NIADGEN 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +Q++ L      ++    ++   D P  Y  G Y +   +E+      EL+         
Sbjct: 59  SQLDNL------KWLGMDWDEGPDKPGNY--GPYRQSERREIYTPLIQELVEKGLAYESY 110

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             +D            + +    +   ++ E  +       I+   +    +G      L
Sbjct: 111 KTEDELTAE------REAQKAAGEAPRYVYE--YEGMSDDEIKASQEAARAKGLQPVVRL 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK    +  D+ + ++ F S  +G D    ++K DG  TY  A +       +     
Sbjct: 163 RLPKDHVYKFDDIVKGEISFESDRLGGDF--VIMKRDGMPTYNFAVV------VDDHLME 214

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +  AV  A   +      +   +  +       K+SKR    +  
Sbjct: 215 ITHVLRGDDHIANTPKQLAVYEAFGWEPP----IFGHMTLIINTETGKKLSKRDESVLQF 270

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 271 IEQYRELGY 279


>gi|323140336|ref|ZP_08075268.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415194|gb|EFY05981.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 653

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/337 (15%), Positives = 114/337 (33%), Gaps = 59/337 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  + D+LA      G +V      ++ G +I         R  +    
Sbjct: 15  PSDNLHIGHAYCTTIADSLARFHRLKGEDVFFLTGSDEHGLKI--------QRKAKEKGV 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMKIIRDDL 249
                 +       L      ++   +++ +   +E+   +V+D    +     I + + 
Sbjct: 67  TPIQYVDAIIANFKLLWKELNIS---NNDFIRTSQERHHKVVQDALQKIYEQGDIYKKNY 123

Query: 250 KALN-IQHDIFISEDDFHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           K L  +  + +  E         P     ++ +  + Y ++            +   D  
Sbjct: 124 KGLYCVPCESYWLERQLDENHCCPDCHRPVEEMEEESYFFKMSKYQDWWLQFIEEHPDFI 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FDN--MIYVM----- 356
           Q   R   + + V + L            DL   +  ++ G    FD   ++YV      
Sbjct: 184 QPASRRNEMINFVKQGL-----------EDLCITRTTFDWGIPVPFDKKHVVYVWFDALL 232

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM------------ 396
                   G+D + + K   A    V ++  + + ++  ++                   
Sbjct: 233 NYLTGIKYGTDDAFFHKYWPASLHLVGKEIVRFHTIIWPIMLHAMGLEMPQEVYGHGWLV 292

Query: 397 --PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
               KMSK  G+ I    ++DE G+D++R+ +L   N
Sbjct: 293 VDGDKMSKSKGNVIDPLGLIDEFGADAIRYFLLREIN 329


>gi|305432137|ref|ZP_07401303.1| methionine--tRNA ligase [Campylobacter coli JV20]
 gi|304444802|gb|EFM37449.1| methionine--tRNA ligase [Campylobacter coli JV20]
          Length = 628

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 95/318 (29%), Gaps = 34/318 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ DTLA      G+E       ++ G +I   A       ++      S+ 
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNSTPKEYADKISSEF 75

Query: 197 PEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDLKALN 253
            + +        +     D ++   +     + W    I KD                  
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGHYCISCESFFAKSQ 135

Query: 254 IQHDI----------FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + ++            + E+ +          I+     Q Y  E  + P   K      
Sbjct: 136 LINECGCPDCGKDTSLLKEESYFFKLSKYQDKIL-----QWYDKEDPILPKNKKNELINF 190

Query: 304 MDRKQLLFRSTMVGDDVDRPL---LKSDGSYTYFAADLAYFKCK---YERGFDNM----- 352
           +         T    D    +   +K D    Y   D  +       Y+   +N      
Sbjct: 191 VQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYISSLDYQSQGENAKFWPA 250

Query: 353 -IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            I+++G D    + R  A+          + +        +      KMSK  G+ +  +
Sbjct: 251 HIHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPK 306

Query: 412 HVVDEVGSDSVRFMMLWR 429
            VVD  G ++ R+ +L  
Sbjct: 307 EVVDAYGLEAFRYFLLRE 324


>gi|224372180|ref|YP_002606552.1| glutamyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589839|gb|ACM93575.1| glutamyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 461

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 92/295 (31%), Gaps = 55/295 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + I   + +PTG +H+G  R A+                    ++            +  
Sbjct: 1   MVITRFAPSPTGYLHIGGLRTALF------------------NWL-----------WAKK 31

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +  L   D+DL       V            +  + + F + +     K+Y  + + 
Sbjct: 32  NNGKFRLRIEDTDLSRNKQEAVDAILEAFNWTGLHWDDEVVF-QSERFDKYKEYVKELLD 90

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIR------DIIDNLARQGYVYEGILPPPKS 296
           K          + +  ++++++      + ++      DI      +G + +  +   K+
Sbjct: 91  K---------GMAYKCYLTKEELETIREARMKGEEPPIDIRKYRDFKGELDKPYVIRFKA 141

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             + K   +               D  + +SDG+ TY    +      +E G  ++I   
Sbjct: 142 PLSGKVGFEDGVKGKAEIDASQVDDFVIARSDGTPTYNFVVV---IDDHEMGMTDIIR-- 196

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           G DH     +   V  A      +        V +  +    KMSKR G    + 
Sbjct: 197 GDDHFTNTFKQVLVYKAFGWDVPKFYH-----VPMIHNEKGSKMSKRDGAVDVME 246


>gi|153826757|ref|ZP_01979424.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739408|gb|EDM53648.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 949

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|320354487|ref|YP_004195826.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122989|gb|ADW18535.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 935

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +     +     VL    V    DG   KMSK  G+ +  +
Sbjct: 557 LYLEGSDQHRGWFQSSLLTSVGTRGRAPYQGVLTHGYVV---DGQGKKMSKSVGNVVAPQ 613

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D+ G++ +R  +      + +     ++ +   +        AY + R+  R     
Sbjct: 614 QVIDQYGAEVLRLWVASENYQDDVKVS-DEILKHVSD--------AYRKMRNTLRFLLSN 664

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D       R+ +      +     L  + AE    +  A    E + +  Y       
Sbjct: 665 LYDF---APERDAVDVSDLQEIDRWALAKY-AELSERVTRAYDRYEFHAI--Y-----HA 713

Query: 532 FHGH 535
            H  
Sbjct: 714 LHNF 717


>gi|309775760|ref|ZP_07670755.1| glutamate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916437|gb|EFP62182.1| glutamate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 486

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 120/351 (34%), Gaps = 76/351 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MH+G+ R A+          GD +  +      +  +E Y+ D   +I     
Sbjct: 9   APSPTGYMHIGNLRTALFEYLIAKHEDGDFILRI-----EDTDQERYV-DGAVEI----- 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            ++   ++    +D     G   G Y++     +  +Y+  L++     +      +  +
Sbjct: 58  -IYDTLKEVGLRHDEGPDIGGDFGPYVQSERLPMYKEYADRLVDLGGAHYC-----FCGE 111

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDIIDNLARQGYVYEGILPPPKS 296
             ++  R + ++L I          F   DP     + +  + +A  G  Y         
Sbjct: 112 EEIEKQRKEAESLGI---------SFKYDDPCKHVSVEEARERIA-NGEKYVVRQTIRHG 161

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   D    ++   ++++ +     LLKSDG  TY  A++      ++ G  ++  V 
Sbjct: 162 GETYFDDEVYGRIEVDNSILDES---VLLKSDGYPTYNFANI---VDDHQMGITHV--VR 213

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT------- 409
           G+++     +   +  +         +     V         K+SKR GD          
Sbjct: 214 GNEYLSSTPKYNLIYQSFGWD-----IPTYVHVPPVMKDEQHKLSKRNGDASFQDLVKKG 268

Query: 410 --LRHVVDEVG---------------SDSVRFMMLWRKNSELLDFDFCKVK 443
                +++ +                 + +R   + R +     FD  K+ 
Sbjct: 269 YLPEAILNYIALLGWSPETEQEIYTLEELIRVFDIKRISKSPAIFDIDKLT 319


>gi|229530488|ref|ZP_04419876.1| isoleucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332261|gb|EEN97749.1| isoleucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 949

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|224531644|ref|ZP_03672276.1| valyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511109|gb|EEF81515.1| valyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 875

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYNKWLENNVFLPNNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF RY + +  +  D          L     +L 
Sbjct: 70  RMKKHNTLWLFGTDHAG----IATQAVFERYLKNIGKSKDDF-----EREELIQEIFKLK 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK+                          +I   +K L   +D               + 
Sbjct: 121 DKHRD------------------------VIVKQIKKLGASYDHSRERFTLDDSFCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  NL  +G +Y G         +     D +
Sbjct: 157 KVFKNLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|331270594|ref|YP_004397086.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329127144|gb|AEB77089.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 646

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 114/342 (33%), Gaps = 76/342 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D +A     +GY+       ++ G +I  LA +           
Sbjct: 15  PSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEA----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  Y+  +   + D +    +N+   K++    DY V+ + KI +     
Sbjct: 64  ------KGITPKEYVDEIVAGIKDLWKVMNVNYD--KFIRTTDDYHVETVQKIFKKLYDQ 115

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G        ++    + Y ++      +     
Sbjct: 116 GDIYKGEYEGLYCTPCESFWTETQLVDGKCPDCGRPVEKTKEEAYFFKMSKYADRLIKYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   +  Q   R   + ++  RP             DL   +  +  G    FD  ++IY
Sbjct: 176 EYHPEFIQPESRKNEMLNNFLRP----------GLQDLCISRTSFNWGIPVSFDEKHVIY 225

Query: 355 VM---------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---- 395
           V                 +D   Y K   A    V +   + + +   ++ +  D     
Sbjct: 226 VWIDALTNYITALGYNQDND-ELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPK 284

Query: 396 ----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                        KMSK  G+ +    +V+  G+D+VR+ +L
Sbjct: 285 QVFGHGWLLVDGGKMSKSKGNVVDPVTLVNHFGTDAVRYYLL 326


>gi|327483482|gb|AEA77889.1| Isoleucyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 949

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 20/161 (12%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A        NVL    V    DG   KMSK  G+ I   
Sbjct: 556 LYLEGSDQHRGWFQSSLLTSVATRGMAPYKNVLTHGFVV---DGEGRKMSKSLGNGIDPA 612

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VV E G+D +R   +    +  +      +K+ ++         +Y + R+  +     
Sbjct: 613 DVVKEYGADILRLWTVSADFTSDMRISKEILKQMTE---------SYRKIRNTAKFLLSN 663

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             D D D   ++ +P E   D  +  L      +  +I++ 
Sbjct: 664 LYDFDAD---KDALPYEELLDIDKWALYK----FNELIKDV 697


>gi|326789740|ref|YP_004307561.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540504|gb|ADZ82363.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 658

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 112/333 (33%), Gaps = 54/333 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A      GY+V      ++ G +I   A        QA  +
Sbjct: 15  PSNKLHIGHSYTTVAADAMARYKRLRGYDVMFLTGTDEHGQKIERRAAEDGVT-PQAFVD 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +  D  +  +  + +        DK+        EE    I K    +    I + + + 
Sbjct: 74  HIVDWIKDLWKTMDI------SYDKFIRTTDKEHEETVQKIFKKLYDKG--DIYKSEYEG 125

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           L     + F +E     G        ++ +  + Y ++      +     + + D  Q  
Sbjct: 126 LYCTPCESFFTEHQLVDGKCPDCGRPVEKVKEESYFFKLSAYQDRLIKHIEENPDFIQPN 185

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM-------- 356
            R   + ++  RP             DL   +  ++ G    FD  +++YV         
Sbjct: 186 TRQNEMLNNFLRP----------GLEDLCVSRTSFKWGIPVEFDPGHVVYVWLDALSNYI 235

Query: 357 ------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------------M 396
                  +D + + +   A    V ++  + + ++   + +  D                
Sbjct: 236 SALGYLQADDANFKRFWPADVHLVGKEIVRFHTIIWPAMLMAMDLPLPKQIFGHGWLVIN 295

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             KMSK  G  +    +V   GSD++R+ +L  
Sbjct: 296 GGKMSKSQGTVVDPSVLVGRYGSDAIRYFLLRE 328


>gi|302382931|ref|YP_003818754.1| valyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193559|gb|ADL01131.1| valyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 904

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+     L +   +   +     G     +I     N TG +H+GH     + D LA
Sbjct: 5   TFDPAAAEPRLYARWEASGAFAPKTDGAAEAYSIVIPPPNVTGSLHIGHALNNTLQDILA 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V      + AG     +                               V +
Sbjct: 65  RYHRMRGKAVLWLPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA   +    +   E ++  V D+  ++    I   L+ L    D          G  +
Sbjct: 94  QLAAAGNVGRRDMGREAFVQKVWDWKAESG-GTIVQQLRRLGASCDWSRERFTLDEGLNA 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L +QG +Y            Q    D +
Sbjct: 153 AVRKVFVQLHQQGLIYRDKRLVNWDPQFQTAISDLE 188



 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 23/143 (16%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   STM   +    L +      Y  +DL             +I+         V R+
Sbjct: 479 ALWPFSTMGWPEKTDDLARF-----YPTSDLVTAAD--------IIFFW-------VARM 518

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             +     ++     V++  LV   RD    KMSK  G+ I    ++DE+G+D +RF M 
Sbjct: 519 MMMGLHFMDEVPFKRVIINGLV---RDEKGQKMSKSKGNVIDPLVIIDELGADPLRFTMA 575

Query: 428 WRKNSELLDFDFCKVKEQSKENP 450
               +  +     +++       
Sbjct: 576 ILSGTRDIKLSRQRIEGYRNFGT 598


>gi|15640701|ref|NP_230331.1| isoleucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587755|ref|ZP_01677515.1| isoleucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153818724|ref|ZP_01971391.1| isoleucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227080863|ref|YP_002809414.1| isoleucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505697|ref|ZP_04395207.1| isoleucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229508729|ref|ZP_04398222.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519521|ref|ZP_04408964.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608716|ref|YP_002879364.1| isoleucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254851014|ref|ZP_05240364.1| isoleucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255743859|ref|ZP_05417815.1| isoleucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262156078|ref|ZP_06029197.1| isoleucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|81545342|sp|Q9KU47|SYI_VIBCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782452|sp|C3LST7|SYI_VIBCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|9655121|gb|AAF93847.1| isoleucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547982|gb|EAX58062.1| isoleucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510746|gb|EAZ73340.1| isoleucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227008751|gb|ACP04963.1| isoleucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344210|gb|EEO09185.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229354253|gb|EEO19183.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357920|gb|EEO22837.1| isoleucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371371|gb|ACQ61794.1| isoleucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846719|gb|EET25133.1| isoleucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738490|gb|EET93879.1| isoleucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030114|gb|EEY48759.1| isoleucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 949

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|71993394|ref|NP_499917.2| glutamyl(E)/glutaminyl(Q) tRNA Synthetase family member (ers-3)
           [Caenorhabditis elegans]
 gi|33285170|gb|AAK39275.2| Glutamyl(e)/glutaminyl(q) trna synthetase protein 3 [Caenorhabditis
           elegans]
          Length = 481

 Score = 50.3 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 96/294 (32%), Gaps = 60/294 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A           GD +  +      +  R  +++DA  QI     
Sbjct: 16  APSPTGHLHIGGLRTAFFNYLFAKKYGGDFILRI-----EDTDRTRFVDDAQDQI----- 65

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L  ++    EG   G Y +    E+    +  L++            +  +
Sbjct: 66  -YSSLNFYNLLPDEGP-REGGKFGPYEQSKRLEIYRNAAYRLIDSGHAYRC-----FCSE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             + ++R   +                RG+         NL+ +  V    +     K  
Sbjct: 119 NRLDLLRKTAEK---------------RGEIPKYDRKCANLSSRDAV---KMEQNGEKFV 160

Query: 300 QKCDMDRKQLLFRSTMVG------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  +D++ + F   + G      D+ D  LLKSDG  TY    LA      +    ++I
Sbjct: 161 IRFKLDKQNVQFHDEVFGSVNQFIDESDPVLLKSDGFPTYH---LANVIDDRKMEISHVI 217

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              G +      +   +  A +    +        + L       K+SKR  D 
Sbjct: 218 R--GMEWLSSTGKHTILYKAFNWTPPKFVH-----LSLIMRSATKKLSKRDKDA 264


>gi|312126758|ref|YP_003991632.1| glutamyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311776777|gb|ADQ06263.1| glutamyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 485

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L       +      Y  +  +
Sbjct: 63  WLGIEW----DEGVEVGGPYGPYRSTERVDIYKKYVDVLFEKGYAYYC-----YCTEEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R +L +   Q   +  +        +   +    L  +G         P+       
Sbjct: 114 EAQRQELLSKG-QMPRYTGKC------RNLTDEEKRKLEAEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGDVEFLSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALGFELPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|258620350|ref|ZP_05715388.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262172241|ref|ZP_06039919.1| isoleucyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587229|gb|EEW11940.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261893317|gb|EEY39303.1| isoleucyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ ++ + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVSPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|229519956|ref|ZP_04409386.1| isoleucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229343008|gb|EEO07996.1| isoleucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|254291960|ref|ZP_04962740.1| isoleucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422099|gb|EDN14066.1| isoleucyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|121634249|ref|YP_974494.1| isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229751|sp|A1KS62|SYI_NEIMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120865955|emb|CAM09692.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131481|gb|EGC54188.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 929

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 93/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      K +     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKGELLSAEDCEHYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|262163906|ref|ZP_06031645.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027434|gb|EEY46100.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ ++ + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVSPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|241889517|ref|ZP_04776816.1| glutamyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863824|gb|EER68207.1| glutamyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 487

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 108/302 (35%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +   + ++  +E               
Sbjct: 9   APSPTGNLHIGNARTALFNYLFAKHNDGDFVLRI-EDTDFKRNKE------------EGE 55

Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               +Y   L  + D  + +    G Y +    ++  KY+ +L+   +     +  +   
Sbjct: 56  RSQLKYMNWLGLDYDEGIGKEKEFGPYRQSERIDIYQKYADQLIAEDKAYKCYMTAEELE 115

Query: 239 QAMMKIIRDDL-KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               + I + L    + +H     E+          ++  +   R+  +    +  P+ +
Sbjct: 116 AEREEQIANGLPPRYSGKHANLTKEE----------QEAFEKEGRKPAIR---IRVPQDR 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T +  DM + +L F     GD     ++K+DG  TY   + A     Y     +++   G
Sbjct: 163 TYKFDDMVKGELSFEGHDFGDF---VIIKNDGVATY---NFAVVIDDYLMKISHVLR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   V  A+  +  +   +      L  +    K+SKR    I      DE+
Sbjct: 215 DDHVSNTPKQLVVYEALGFEPPRFGHM-----TLIVNENKKKLSKRDESIIQFIEQYDEL 269

Query: 418 GS 419
           G 
Sbjct: 270 GY 271


>gi|240127458|ref|ZP_04740119.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268685835|ref|ZP_06152697.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626119|gb|EEZ58519.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 929

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----LKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IGDAVQQADMVEIDRYALVLARRLQE 700


>gi|197334356|ref|YP_002156417.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197315846|gb|ACH65293.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 460

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 107/313 (34%), Gaps = 53/313 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS----VFWRYQQALYNN 192
           H+GH R  V  D ++  + F GY++T    I D   +I   A           ++ + + 
Sbjct: 36  HIGHGRTFVSFDVISRYLRFLGYDLTFVRNITDIDDKIIKRAAENGETCDALTERLIADM 95

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------VKDYSVQAMMKII 245
            +D          ++    E   +  + +    E  +  +        +        ++ 
Sbjct: 96  HADFDALNMKRPDVEPRATEYIKEIVALVERLIERGFAYVASNGDVMFEVKKYDEYGRLS 155

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R DL+ L     + + E    R     +   +  +++ G   E     P         ++
Sbjct: 156 RQDLEQLQAGSRVTLEEASVKRSGMDFV---LWKMSKPG---EPTWESPWGPGRPGWHIE 209

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   S+++GD  D     SD  + +   ++A   C ++  +   +            
Sbjct: 210 CSAM--NSSILGDHFDIHGGGSDLMFPHHENEIAQSCCAHDTPY---VNTW--------- 255

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
                             +   +V + R+    KMSK  G+F T+R V+    S++VR+ 
Sbjct: 256 ------------------MHSGMVMVDRE----KMSKSLGNFFTIRDVLAHYDSETVRYF 293

Query: 426 MLWRKNSELLDFD 438
           ++       L++ 
Sbjct: 294 LMSGHYRSQLNYS 306


>gi|193213376|ref|YP_001999329.1| glutamyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086853|gb|ACF12129.1| glutamyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 517

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 25/307 (8%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
              G +V   F + +PTG +HVG  R A+     A     +G  V R     D   ++  
Sbjct: 14  AMAGQRVRTRF-APSPTGYLHVGGLRTALYNYLFAK--RMNGEFVIRIE-DTDQSRKVED 69

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              ++    + A    D     G   G Y++    ++  KY  +LL   ++K        
Sbjct: 70  AEKNLISTLEWAGIIADESPMHGGNYGPYVQSQRLDIYKKYCQQLL---DDKNAYYCFST 126

Query: 237 SVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           S +          + L  +++  ++ ED       S I+  +D     G  Y   +  P 
Sbjct: 127 SEELEENRQLQLKQGLQPKYNRKWLPEDMGGSMPQSEIKKKLDE----GVPYVVRMKVPD 182

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
             +    D+ R  + F S  +    D+ L+KSDG  TY     A     +   F ++I  
Sbjct: 183 YVSVWFEDVIRGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLMEFTHIIR- 235

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G +    + +   +      +  +        + L  +    K+SKR GD     +V  
Sbjct: 236 -GEEWLPSMPKHLLLYEFFGWEPPKFAH-----LPLLLNPDRSKLSKRQGDVAVEDYVRK 289

Query: 416 EVGSDSV 422
              S+++
Sbjct: 290 GYSSEAI 296


>gi|42518602|ref|NP_964532.1| leucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81668177|sp|Q74KS1|SYL_LACJO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|41582887|gb|AAS08498.1| leucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329666886|gb|AEB92834.1| leucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 804

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           E    G   KH+  E  D  ++E       +WL    D++V    K +   L+  +    
Sbjct: 365 EKEAFGGDGKHINSEFLDGLNNEEAKKRMIEWLE---DHNVGE--KKVNYKLRDWDFSRQ 419

Query: 258 IFISE----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            +  E      +  G  S + +  D L  +      I P    ++      D   ++  +
Sbjct: 420 RYWGEPIPVIHWEDGTTSLVPE--DELPLRLPHATDIKPSGTPESPLANLTDWVNVVDEN 477

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----G 362
              G      +    GS  Y+   +     K    +D +       +Y+ G++H+     
Sbjct: 478 GRKGKRETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLL 537

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVG 418
           Y +    V   +     +         +LY  G+      KMSK  G+ +    V+DE G
Sbjct: 538 YARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYG 592

Query: 419 SDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           +DS+R + M        +D+D           P               ++  D    L  
Sbjct: 593 ADSLRMYEMFMGPLDASIDWD--------DNGPAST------------KKFLDRVWRLFV 632

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +      IPQE   D ++ +L      Y   ++  T   E
Sbjct: 633 NDLDLKAIPQEKIVDENDGELDKV---YAETVKKVTEDFE 669


>gi|268319013|ref|YP_003292669.1| hypothetical protein FI9785_522 [Lactobacillus johnsonii FI9785]
 gi|262397388|emb|CAX66402.1| leuS [Lactobacillus johnsonii FI9785]
          Length = 804

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 55/340 (16%)

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
           E    G   KH+  E  D  ++E       +WL    D++V    K +   L+  +    
Sbjct: 365 EKEAFGGDGKHINSEFLDGLNNEEAKKRMIEWLE---DHNVGE--KKVNYKLRDWDFSRQ 419

Query: 258 IFISE----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            +  E      +  G  S + +  D L  +      I P    ++      D   ++  +
Sbjct: 420 RYWGEPIPVIHWEDGTTSLVPE--DELPLRLPHATDIKPSGTPESPLANLTDWVNVVDEN 477

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----G 362
              G      +    GS  Y+   +     K    +D +       +Y+ G++H+     
Sbjct: 478 GRKGKRETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLL 537

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVG 418
           Y +    V   +     +         +LY  G+      KMSK  G+ +    V+DE G
Sbjct: 538 YARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYG 592

Query: 419 SDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           +DS+R + M        +D+D           P               ++  D    L  
Sbjct: 593 ADSLRMYEMFMGPLDASIDWD--------DNGPAST------------KKFLDRVWRLFV 632

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           +      IPQE   D ++ +L      Y   ++  T   E
Sbjct: 633 NDLDLKAIPQEKIVDENDGELDKV---YAETVKKVTEDFE 669


>gi|262401619|ref|ZP_06078185.1| isoleucyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352036|gb|EEZ01166.1| isoleucyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ ++ + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVSPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|258624722|ref|ZP_05719656.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258583009|gb|EEW07824.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ ++ + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVSPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|153829358|ref|ZP_01982025.1| isoleucyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229525334|ref|ZP_04414739.1| isoleucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|148875141|gb|EDL73276.1| isoleucyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229338915|gb|EEO03932.1| isoleucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938843|sp|Q45477|SYI_BACSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 921

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 110/326 (33%), Gaps = 62/326 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  S  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRSDLLDAIKETKWVPEWGEQRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                   +  + EG   P     T   + D   + F 
Sbjct: 470 GEPVITDETIEHVSELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVA 371
           S   G      L + D        DL        R  D  +Y+ GSD   G+     + A
Sbjct: 530 S---GSSHQAVLEERD--------DLV-------RPAD--LYLEGSDQYRGWFNSSLSTA 569

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            AV+ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +     
Sbjct: 570 VAVTGKAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSVDY 626

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +      +K+ ++          Y + R+ FR       D D      N +  E   
Sbjct: 627 QADVRVSDAILKQVAE---------VYRKIRNTFRFLHGNLFDFD---PKTNAVAVEDLR 674

Query: 492 DTSELQLIVHLAEYPRVIENATIAQE 517
           +  +  LI  L +    ++ A    E
Sbjct: 675 EVDQYMLIK-LNKLIDKVKKAYDEYE 699


>gi|148377841|ref|YP_001256717.1| glutamyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|238686666|sp|A5IZ19|SYE_MYCAP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|148291887|emb|CAL59278.1| Glutamyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 463

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 95/284 (33%), Gaps = 45/284 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  L         +    +   +Q+  L  
Sbjct: 9   APSPTGYLHIGGARTALFCYLFAKHYNGTFVFRLED----TDVKRNVADGERSQLENLKW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +    E   + ++EL+           K Y   
Sbjct: 65  L-------GIIPDESPLNPNEKYGKYRQSEKLERYRQIANELVQKGL-----AYKSYDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +++   + +   I           +  +   I +       +   Y      PK    
Sbjct: 113 EELEMQHSEAEKNGIA-------SFRYDKNWLKISEEEKQKRDKAGEYSIRFSMPKDVVY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R ++ F S  +GD     + KSDG  TY   + A     ++    +++   G +
Sbjct: 166 EWDDIVRGKISFDSNDIGDW---VIQKSDGYPTY---NFAVVVDDFDMEITHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           H     R  ++  A+  K  +        + +  +    K+SKR
Sbjct: 218 HITNTPRQLSIYNALGWKAPEFGH-----LTVITNMEGKKLSKR 256


>gi|282897582|ref|ZP_06305582.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197505|gb|EFA72401.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 488

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 108/352 (30%), Gaps = 57/352 (16%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
             +E G+  +        ++         H+GH R  +V D +   + F GY V      
Sbjct: 17  QPVEPGQVRMYYCGVTVYDYC--------HLGHARACIVWDVVRRYLEFIGYRV------ 62

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFPE 226
                           RY Q   + D  +             V +     Y  ++     
Sbjct: 63  ----------------RYIQNFTDIDDKILNRARKENSTMETVAERYIQAYFEDMGRLGV 106

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLAR 282
            +     +       +K +  DL+     +    D++ +  +F+       R  + +L  
Sbjct: 107 READEYPRATHTMNGIKKLIQDLEVRGYAYAADGDVYYAVRNFNEYGKLSGRK-LADLQA 165

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                  I  P   K     D     L   +       + P  K  G   +     A  +
Sbjct: 166 GASERVNIEDPEYQKKKDPFDF---ALWKAAKPCEPAWESPWGK--GRPGWHIECSAMVR 220

Query: 343 CKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
            +     D  I+  G+D     H   + + EAV       K   N  L   +        
Sbjct: 221 DRLGDTID--IHAGGADLIFPHHENEIAQSEAV-----TGKPLANYWLHNGMVKVDG--- 270

Query: 398 IKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            KMSK  G+F T+R ++D  V   ++R  +L  +  + LDF    +   +  
Sbjct: 271 EKMSKSLGNFTTIRDLLDRGVDPMALRLFVLMAQYRKPLDFTEEAILAATNG 322


>gi|302874832|ref|YP_003843465.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690548|ref|ZP_07632994.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577689|gb|ADL51701.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 880

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 54/199 (27%), Gaps = 35/199 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P      L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEDRLYKWWEEEKFFTPKVDKNKKPFTIMMPPPNITGHLHLGHALDNTLQDVLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVG 210
                 G+                    S  W            LP E +        V 
Sbjct: 70  RTKRMQGF--------------------STLW------------LPGEDHASIATEVRVE 97

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            EL  K   +      E +L  V ++S     + I+  LK + +  D             
Sbjct: 98  TELL-KQGLKKKEMGREAFLEKVWEWS-DTYRERIKTQLKKVGVSADFTREAFTMDENLN 155

Query: 271 SPIRDIIDNLARQGYVYEG 289
             +R +   L  +G +Y+G
Sbjct: 156 KAVRTVFVKLYEEGLIYQG 174



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 20/140 (14%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELL 435
            +   + +L   +    DG   KMSK  G+ +    V+D  G+D++RFM++   +    +
Sbjct: 507 DETPFHTVLIHGLVRAEDGR--KMSKSLGNGVDPLEVIDTYGADALRFMLITGNSPGNDI 564

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            F   KV+             A      I+  ++ +  +LD DL  +     +       
Sbjct: 565 RFKMDKVES------------ARNFANKIWNASRFVMMNLDMDLVNKYKDSTKYSVADKW 612

Query: 496 LQLIVHLAEYPRVIENATIA 515
           +     L+ +  +++  T  
Sbjct: 613 I-----LSRFNTLVKEVTEN 627


>gi|150392185|ref|YP_001322234.1| glutamyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|187470973|sp|A6TWK7|SYE_ALKMQ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|149952047|gb|ABR50575.1| glutamyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 493

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 103/292 (35%), Gaps = 39/292 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-------GAQINTLALSV 181
           + +PTG +H+G  R A+     A      G  + R   + D        GA    L    
Sbjct: 9   APSPTGFVHIGSLRTALYNYLFAR--KNQGKYILR---VEDTDQSRFVEGAIEGMLKSMD 63

Query: 182 FWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           +    + + +   +  L +    G Y++     +  ++ ++LL      +        + 
Sbjct: 64  WAGVSHNEGVVLEEETLKQQGQYGPYIQSERLPIYQEHITKLLEEG-HAYHCFCSKERLD 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +  +        ++D    E+          ++++      G  Y   L  P+++  
Sbjct: 123 EVREKQKA--AGETAKYDGHCRENP---------KEMVREKIEAGESYVIRLKLPENRDI 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R ++   +   GD  D+ L+KSDG  TY     A     +     ++I   G +
Sbjct: 172 EFNDIVRGKVTMNT---GDLDDQVLIKSDGFPTYHF---AVVVDDHLMEITHVIR--GEE 223

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                 +   +   +  +  Q  V L  ++   R     K+SKR GD     
Sbjct: 224 WLPSTPKHVYLYEVMGWQAPQY-VHLPNILNTER----KKLSKRQGDVAVGD 270


>gi|116513002|ref|YP_811909.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|122939932|sp|Q02W76|SYE_LACLS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116108656|gb|ABJ73796.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 483

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 123/349 (35%), Gaps = 59/349 (16%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  RE ++ D 
Sbjct: 2   NKKIRVRY-APSPTGLLHIGNARTALFNYLFARHHGGDFIIRI-----EDTDRERHVEDG 55

Query: 171 GA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP 225
              Q+  L      R+    ++   +  E Y        Y K++ + LA+  +      P
Sbjct: 56  ERSQLENL------RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYYSYKTP 109

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           EE      K  +       I +     + +   +I+E      +P  +R  +D       
Sbjct: 110 EELEADHAKQEAAGIPPHYINEYAGMSDDEKAAYIAERKAQNIEP-VVRISVDE------ 162

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                         +  D+ + ++ F    +G   D  + K DG  TY   + A     +
Sbjct: 163 ----------KAIYKWNDIVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDH 207

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    ++I   G DH     +   V  A+  +  Q       +  +       K+SKR  
Sbjct: 208 DMQISHVIR--GDDHIANTPKQLVVYDALGWEAPQFGH----MTLIINSETGKKLSKRDT 261

Query: 406 DFITLRHVVDEVG--SDSV-RFMMLWRKNS--ELLDFDFCKVKEQSKEN 449
           + +       + G  SD++  F+ L   N   E   F   ++ E   EN
Sbjct: 262 NTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSREELIELFDEN 310


>gi|15612672|ref|NP_240975.1| glutamyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|13878782|sp|Q9KGF6|SYE_BACHD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|10172721|dbj|BAB03828.1| glutamyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 485

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 94/297 (31%), Gaps = 40/297 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R     + G     L  S+ 
Sbjct: 10  APSPTGHLHIGGARSALFNYLFAKNQGGMFVLRIEDTDQAR-----NVGQAKEKLLDSLK 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  K+  +LLN  +  +  + ++       
Sbjct: 65  WLGVEW----DESIDVGGEYGPYSSMERLDIYKKHIEQLLNEGKAYYCYMTEEELEAERE 120

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I           D  ++E+     +   I+ ++                P+ +  +  
Sbjct: 121 AQIARGEMPKYSGRDRDLTEEQRRAYEAKGIKPVV------------RFRVPEGQVIKIQ 168

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  R ++ F S  +GD     + + DG   Y   + A     +     ++I   G +H  
Sbjct: 169 DAVRGEVSFESDGIGDF---VIARKDGVPMY---NFAVVVDDHLMKISHVIR--GEEHLS 220

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              R   +  A                 L  +    KMSKR    I       E+G 
Sbjct: 221 NTPRQVMLYEAFGWDVPTFAH-----ASLILNPNRQKMSKRDESIIQFVEQYKELGY 272


>gi|297580806|ref|ZP_06942732.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535222|gb|EFH74057.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|325478556|gb|EGC81668.1| valine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 879

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 69/268 (25%), Gaps = 42/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS   K +      G  +   +        I     N TG +H+GH     + D +   
Sbjct: 6   NPSQFEKQIYEKWEDGGYFKARVNPDKKPFTIVMPPPNVTGYLHLGHALNNTIQDIIIRH 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +GY                           +AL+   +D          +  + KE 
Sbjct: 66  KRMAGY---------------------------EALWIPGTDHASISTESKVVDKISKEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F EE W               I+  L+ + +  D               +
Sbjct: 99  KTKADLGRDGFLEEAW------DWTHKYGGTIKQQLRTIGVSCDWDHDSFTMDDNLTKAV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR--------KQLLFRSTMVGDDVDRPLL 325
           + +   +   G +Y G          +    D           L +      +D D  + 
Sbjct: 153 KRVFKKMYDDGLIYRGNRIVNWDPKAETAISDAEVYHEDQTGHLWYIKYFF-EDSDEYVT 211

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         DLA      +  F + I
Sbjct: 212 IATTRPETMLGDLAVAVNPEDPRFKDKI 239



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           ++  F   I V G D   +   +  + +++    +++         L RD    KMSK  
Sbjct: 468 FDYFFPTDILVTGYD-IIFFWVIRMIFSSM-YNTSKVPFHHVLFTGLIRDPQGRKMSKSL 525

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           G+ +    VV+E G+D++RF ++   +    + +D  ++                 +  +
Sbjct: 526 GNGVDPIDVVNEYGADALRFTLITGNSPGNDMRYDEKRILASRNF---------ANKLWN 576

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             R       + D   F    +  E ++      ++  L     VI + +   +      
Sbjct: 577 ASRFVLMNIEEGDDLNFSGENLELEDKW------ILKRL---NDVIVDVSKNLD-----K 622

Query: 524 YLYDLASV------FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           Y   LA+       ++ +     E  ++R    +      ++  L++    ++   L ++
Sbjct: 623 YEIGLAADRIEDFIWNEYCDWYIEFAKIRLYGEDEDAKANVKKVLLY----VLRKMLALL 678


>gi|229512427|ref|ZP_04401901.1| isoleucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350577|gb|EEO15523.1| isoleucyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|51246404|ref|YP_066288.1| isoleucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826763|sp|Q6AK45|SYI_DESPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50877441|emb|CAG37281.1| probable isoleucyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 939

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 23/173 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     A           VL    V    DG   KMSK  G+ +  +
Sbjct: 558 LYLEGSDQHRGWFQSSLITATGTRGYAPFKGVLTHGYVV---DGQGKKMSKSVGNVVAPQ 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+DE G++ +R  +      + +      +K+ S          +Y + R+  R     
Sbjct: 615 EVIDEYGAEILRLWVSSEDYRDDVKVSKEILKQVSD---------SYRKIRNTIRYFLGN 665

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
             D D     R  + + SE D         LA +  +   I  +    E + +
Sbjct: 666 LNDFDPS-KDRIAVSEMSELDRWA------LARFEELRAKITESYDKYEFHAI 711


>gi|254227134|ref|ZP_04920678.1| isoleucyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620342|gb|EAZ48732.1| isoleucyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|304407500|ref|ZP_07389152.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343451|gb|EFM09293.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 886

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P           + G  +         K  I     N TG +H+GH     + D + 
Sbjct: 13  TYDPKSAEHKWYEYWMKGGYFEAGKRPDAPKYTIVIPPPNVTGMLHIGHALDFTLQDIMT 72

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++                                   LP   + G+  +   +
Sbjct: 73  RTKRMQGFDAL--------------------------------WLPGSDHAGIATQTKVE 100

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++  +     IR+    +    D          G   
Sbjct: 101 QKLREQGLSRYDLGREKFLEKVWEWK-ETYNNTIREQWAKMGFGLDYSRERFTLDEGLSR 159

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R +   L  +G +Y G
Sbjct: 160 AVRQVFVKLYEKGLIYRG 177



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 12/109 (11%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +IY         V R+   A   +++    +VL+  LV   RD    K
Sbjct: 483 YPTDLLVTGYD-IIYFW-------VARMIFTALEFTDQIPFKDVLMHGLV---RDENNQK 531

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           MSK  G+ I    V+++ G+D++RFM+       + L F + KV++   
Sbjct: 532 MSKSLGNGIDPLDVIEKYGADAMRFMLSTNNTPGQDLRFRWEKVEQARN 580


>gi|294783024|ref|ZP_06748348.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479902|gb|EFG27679.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 887

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 75/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +           +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKTWEESKFFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G         + AG  I T         ++ L   D               +  E 
Sbjct: 69  NRMRGKNTLWMPGCDHAG--IATQNKVERKLAEEGLKKEDI-------GREKFLEMTWEW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II   L+ L    D          G    +
Sbjct: 120 KEKYG------------------------GIITQQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           + I ++L   G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 KKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 106/357 (29%), Gaps = 67/357 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +               +F+            + +       + +   
Sbjct: 394 WLENIRDWCISRQIWWGHRIPAWYGPDRHVFV-----------AMDEAEAKEQAKKHYGH 442

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    +             L   STM   +  + L            DL Y       G
Sbjct: 443 DVELSQEEDVLDTWFSS--ALWPFSTMGWPEKTKEL------------DLFYPTNTLVTG 488

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +I+   +           +      KK     +    +   RD +  KMSK  G+  
Sbjct: 489 AD-IIFFWVAR--------MIMFGMYELKKIPFKNVFFHGI--VRDEIGRKMSKSLGNSP 537

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               ++ E G D++RF M++   S+  D  F         N  F  +   A    I    
Sbjct: 538 DPLDLIKEFGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLE 594

Query: 469 KDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                 +D       ++ +   S  + +   +   L ++   ++NA  A         +Y
Sbjct: 595 GFDVKSVDKTKLDYELVDKWIISRLNETAKDVEDCLEKFE--LDNAAKA---------VY 643

Query: 527 D-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           + L   F   +    E  ++R    N  K      ++    A      I+  GL ++
Sbjct: 644 EFLRGDFCDWY---VEIAKIRLYNDNEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|294496909|ref|YP_003560609.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346846|gb|ADE67175.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 660

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A       QQ + +
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEKNVTPQQYVDD 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             S + E             +  D    + +   E +   IV+        KI    L+ 
Sbjct: 77  IVSGIKEL-----------WDKMDISYDDFIRTTEPRHKEIVE--------KIFARLLEQ 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D +   G V   +             +  +   F
Sbjct: 118 GDIYLDEYEGWYSVPDETYYTEHQLVDPIVENGKV---VGGKSPDSGHPVELVREESYFF 174

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
           +   +G  VDR L   + + ++                    DLA  +  ++ G      
Sbjct: 175 K---MGKYVDRLLAFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGN 231

Query: 349 FDNMIYVMGSDHSGYVKR--------------LEAVAAAVSEKKAQINVLLCELVRLYRD 394
             ++IYV     S Y+                  A    V ++  + + +   ++ +  D
Sbjct: 232 PKHVIYVWIDALSNYITSLGYDTENDESYRKYWPANVHLVGKEIVRFHTIYWPIMLMALD 291

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 292 LPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 340


>gi|261212209|ref|ZP_05926495.1| isoleucyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838817|gb|EEX65468.1| isoleucyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 949

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ ++ + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVSPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|160944580|ref|ZP_02091808.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444362|gb|EDP21366.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103338|emb|CBL00882.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 901

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 51/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +    + G  +            I     N TG +H+GH     + D L   
Sbjct: 9   DPSQVEDRIYQFWLDGGYFHTKADPDKKPYTIVMPPPNVTGQLHMGHAVDNTMQDILIRT 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ +  E 
Sbjct: 69  KRMQGY---------------------------AALWVPGTDHASIATEAKVVEAMRAEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W    K          I   LK L    D          G    +
Sbjct: 102 LTKEMVGRDGFLERAWAWKTK------YGNRIVSQLKKLGSSCDWERERFTMDEGCSEAV 155

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y G
Sbjct: 156 KEVFVRLYDKGLIYRG 171


>gi|94986597|ref|YP_594530.1| leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988802|sp|Q1MS17|SYL_LAWIP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94730846|emb|CAJ54208.1| Leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 835

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 74/223 (33%), Gaps = 16/223 (7%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + K           Y  ++     K  +  +   P+G +H+GH R   +GD +A +
Sbjct: 8   DPNIIEKKWQRYWEEQHAYACDIDPNKKKYYVLEMWPYPSGNIHMGHVRNYSIGDVIARI 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD----LPEGYYPGVYLKHV 209
               GY V      +  G      A+    +     Y N ++    L    Y   + + +
Sbjct: 68  KRMQGYNVLHPMGWDAFGLPAELAAIKHHTQPADWTYTNINEMRAQLKRLGYSYDWQREI 127

Query: 210 GKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNI------QHDIFIS 261
                D Y  E L F +  EK L + +  + Q         L    +      + D  I 
Sbjct: 128 ATCDPDYYQWEQLFFVDCFEKGL-VYRKKAPQNWCPSCNTVLANEQVIEGSCWRCDTSII 186

Query: 262 EDD---FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +   +         +++D+L    Y +   +   +     K
Sbjct: 187 QKELTQWFLKITDYAEELLDDLTTLKYSWPDRVITMQENWLGK 229


>gi|110640042|ref|YP_680252.1| isoleucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966463|sp|Q11NV4|SYI_CYTH3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110282723|gb|ABG60909.1| Isoleucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 1110

 Score = 50.3 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 15/164 (9%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A++  +   K     ++   + L ++G   KMSKR G+ +     +D
Sbjct: 618 GVDQTRGWFFTLHAISGML-YDKVAFKNVIANGLVLDKNG--NKMSKRVGNVVNPFETID 674

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G D+ R+ M+      + L F+   + E  +      +Q  Y    S F     ++ +
Sbjct: 675 KYGPDATRWYMITNAPPWDNLKFNLDGITEVQRRF-FGTLQNTY----SFF----ALYAN 725

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           LD   F    IP     ++    ++  L    + + +A    EP
Sbjct: 726 LDNFTFAEAEIPLAQRTESDRW-ILSKLQSLVKDVADAYSDYEP 768


>gi|319891494|ref|YP_004148369.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161190|gb|ADV04733.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465335|gb|ADX77488.1| cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 466

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++     +
Sbjct: 16  QPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEV---NYVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L     ++ E Y    Y       +    S+  +    +  +  +K 
Sbjct: 73  KLI-----KRSQELGETVPEIAERYIQAFYEDTEALNVKKATSNPRVMDHMDDIIKFIK- 126

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  K++ +   A     D++     F           ID+L          +    
Sbjct: 127 -------KLVDEGY-AYESGGDVYFRTRQFEDYG-KLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +   K D     L  ++       + P  +    +    + +A+     + G    I+ 
Sbjct: 169 EQGENKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAF----EKLGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +         A SE           +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH----HENEIAQSEAHNHETFANYWMHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVEAARSG 314


>gi|240047826|ref|YP_002961214.1| valyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985398|emb|CAT05411.1| Valyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 823

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 34/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K ++   +    +  +   K     I     N TG +H+GH     + DT+        
Sbjct: 11  EKDINQKWIEKKYFKASDNPKKPFCIIT-PPPNVTGQLHLGHAWNTYLQDTI-------- 61

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                    RY++    +   LP   + G+  +   +E  +K  
Sbjct: 62  ------------------------IRYKKIRNFDVFLLPAVDHAGIATQAKVEEKINKEG 97

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  +   EK+L +   +  +   KII+     L I +D          G    + D   
Sbjct: 98  IKKEDLGLEKFLELCYQWKDEQYQKIIKQ-WGKLGIAYDYSKERFTLDEGAKEAVSDFFI 156

Query: 279 NLARQGYVYEG 289
           +L +Q  +Y+G
Sbjct: 157 HLYKQNLLYKG 167


>gi|157826025|ref|YP_001493745.1| glutamyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|229470628|sp|A8GPB2|SYE2_RICAH RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|157799983|gb|ABV75237.1| glutamyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 463

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 98/305 (32%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I   + +PTG +H+G  R A+     A              + N          L 
Sbjct: 1   MTNVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HNN------GKFLLR 41

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++       D        + L    + +     ++L      + L   K Y    
Sbjct: 42  IEDTDKERSTKAAVDAIFSGLKWLGLDWDAEVIFQSKRNDLYKKAALRLLKEGKAYYCFT 101

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + I    +        FI   ++   +P      +  + R        L  P+     
Sbjct: 102 SQEEIEKQRQKALENKQHFIFNSEWRDKEPDAYPTDVKPVIR--------LKTPREGRIT 153

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + +++  ++ +    D  LL++DG+ TY  A +A     ++ G  ++I   G DH
Sbjct: 154 IHDTLQGEVVIENSHID---DMVLLRADGTATYMLAVVA---DDHDMGITHIIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R  A+  A+  +   +       + L       K+SKR G           +G D
Sbjct: 206 LTNAARQIAIYQALGYEVPSMTH-----IPLIHGADGAKLSKRHG----------ALGVD 250

Query: 421 SVRFM 425
           + + M
Sbjct: 251 AYKNM 255


>gi|228989296|ref|ZP_04149287.1| Glutamyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228995479|ref|ZP_04155147.1| Glutamyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229003102|ref|ZP_04160952.1| Glutamyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758148|gb|EEM07343.1| Glutamyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228764208|gb|EEM13087.1| Glutamyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228770374|gb|EEM18947.1| Glutamyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 491

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGEYGP--YRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
           +DL    + +  ++                E   + G+      + I     +G +    
Sbjct: 103 EDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEEQIKQFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDVVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      Q   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPQFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                 +G 
Sbjct: 270 IEQYQALGY 278


>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123743221|sp|Q3AEP2|SYI_CARHZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 925

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 23/173 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + A A         VL    +    D    KMSK  G+ +   
Sbjct: 553 LYLEGSDQHRGWFNSSLSTAVATRGMAPYKAVLTHGFLV---DEKGRKMSKSLGNVVDPL 609

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ E+G+D +R  +        L      +K+ ++          Y + R+  R     
Sbjct: 610 KVIKELGADILRLWVASADYRSDLAISNNILKQTAEG---------YRKIRNTIRFLLGN 660

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIV---HLAEYPRVIENATIAQEPYKL 521
             D D +   ++ +P E   +     L      +A     +  A    E + +
Sbjct: 661 LYDYDHE---KHRVPYERLLEIDRWALAKLHRLIAR----VVRAYRDYEFHVV 706


>gi|323497796|ref|ZP_08102810.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317143|gb|EGA70140.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 942

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 101/303 (33%), Gaps = 38/303 (12%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H      +  +   + 
Sbjct: 447 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTIELVEQVAKLVE 506

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G          +       + D+ + +  +  V  D         G   Y   D    
Sbjct: 507 EKGI---QAWWDLEISDLLGEEADKYEKVLDTLDVWFDS--------GVTHYSVVD---A 552

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           + +Y  G    +Y+ GSD   G+ +     + A+ ++     VL    V    DG   KM
Sbjct: 553 REEYN-GASADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGQGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 659

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L       +++P E         +   LA    ++  A      + 
Sbjct: 660 IRNTAR---FFLANLSGFNPATDLVPAEEMVALDRWAVGRALAAQEEIV-KAYGEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VTQ 718


>gi|238019859|ref|ZP_04600285.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
 gi|237863383|gb|EEP64673.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
          Length = 944

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 61/172 (35%), Gaps = 23/172 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A A + K    +VL    V    DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFNSSLLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSD 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G+D +R  +        +      VK+ S+          Y + R+ FR      
Sbjct: 630 IIDVYGADVMRLWVSSADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            D + +   +      SEFD     L+        V   +  A    E + L
Sbjct: 681 DDFNPNT-DKVAYADMSEFDK--WALLRL----EEVRQKVTEAYENYEFHML 725


>gi|229015490|ref|ZP_04172488.1| Glutamyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021699|ref|ZP_04178281.1| Glutamyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739567|gb|EEL89981.1| Glutamyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745777|gb|EEL95781.1| Glutamyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 491

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQ 186
           + +PTG +H+G+ R A+     A                     Q     + +      +
Sbjct: 16  APSPTGHLHIGNARTALFNYLFAR-------------------HQDGKFIIRIEDTDVKR 56

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 +S L        YLK +G +       E ++   E      +      + K + 
Sbjct: 57  NVAGGEESQLK-------YLKWLGMD-----WDEGVDVGGE--FGPYRQTERLDIYKKLY 102

Query: 247 DDLKALNIQHDIFI---------------SEDDFHRGD-PSPIRDIIDNLARQGYVYEGI 290
            DL    + +  ++                E   + G+      + +     +G +    
Sbjct: 103 VDLLERGLAYKCYMTEEELEAEREGQIARGETPRYAGNHRDLTEEQMKGFEAEGRIPSIR 162

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P  +     D+ + ++ F S   GD     ++K DG  TY   + A     +     
Sbjct: 163 FRVPADRDYTFKDIVKDEVAFHSNDFGDF---VIVKKDGIPTY---NFAVAVDDHLMEIT 216

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A      +   +      L  +    K+SKR    I  
Sbjct: 217 HVLR--GDDHISNTPKQMMIYEAFGWDIPRFGHM-----TLIVNESRKKLSKRDESIIQF 269

Query: 411 RHVVDEVGS 419
                E+G 
Sbjct: 270 IEQYKELGY 278


>gi|227499878|ref|ZP_03929971.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217987|gb|EEI83260.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 879

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 63/240 (26%), Gaps = 41/240 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS   K +      G  +   +       +I     N TG +H+GH     + D +   
Sbjct: 6   NPSQFEKEIYEKWEKGGYFKARVNPDKKPFSIVMPPPNVTGYLHLGHALNNTIQDIIIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G+                           +AL+   +D          ++ +  E 
Sbjct: 66  KRLAGF---------------------------EALWIPGTDHASISTESKVVEKIAGEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F EE W               I++ L+ + +  D               +
Sbjct: 99  KTKQDLGREGFLEEAW------DWTHKYGGRIKEQLRTIGVSCDWDHDSFTMDENLTRAV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR--------KQLLFRSTMVGDDVDRPLL 325
           + +   +   GY+Y G          +    D           L +      D  D   +
Sbjct: 153 KKVFKKMYDDGYIYRGDRIVNWDPLAETAISDAEVYHEDQVGHLWYIKYFFEDSDDFVTI 212



 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 34/209 (16%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-EL 434
               ++         L RD    KMSK  G+ +    VV+E G+D++RF ++   +    
Sbjct: 497 YNTGEVPFSHVLFTGLIRDSQGRKMSKSLGNGVDPIDVVNEYGADALRFTLITGNSPGND 556

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + +D  ++                 +  +  R       D D   F    +  E ++   
Sbjct: 557 MRYDEKRILASRNF---------ANKLWNASRFVLMNIEDGDDLEFTGENLELEDKW--- 604

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV------FHGHWSHGRENPRLRFV 548
              ++  L     VI + T   E      Y   LA+       ++ +     E  ++R  
Sbjct: 605 ---ILKRL---NDVIVDVTKNLE-----KYEIGLAADRIEDFIWNEYCDWYIEFAKIRLY 653

Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNII 577
             +      ++  L++    ++ + L ++
Sbjct: 654 GDDKEAKKNVKKVLLY----VLKNMLILL 678


>gi|158321063|ref|YP_001513570.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141262|gb|ABW19574.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 884

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 72/267 (26%), Gaps = 39/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P      +    +    +   +        I     N TG +H+GH     + D L   
Sbjct: 10  NPQEFEGRIYEHWMKNNYFKAEVNPDKKPFCIVLPPPNITGQLHMGHALDHTLQDILIRW 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE              +  +++   +  + +   +         G+    VG+E 
Sbjct: 70  KRMQGYETL-------WQPGSDHASIATEVKVVEKIKAEE---------GLSKLEVGRE- 112

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E  W         +     I D +K L    D          G  + +
Sbjct: 113 ---------GFLERAWK------WKEEYGGRIVDQMKKLGDSCDWSRERFTLDEGLSNAV 157

Query: 274 RDIIDNLARQGYVYEG-------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            ++   L  +G +Y G                 +    ++    +  +    D D  L  
Sbjct: 158 TEVFIKLYEKGLIYRGNRIINWCPDCKTSLSDAEVEHEEKVGHFWHISYPIKDSDEVLEI 217

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 218 ATTRPETMLGDTAIAVHPEDERYQHLI 244



 Score = 37.6 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFC 440
           +V L  LV   RD    KMSK  G+ I    ++D+ G+D++RF ++   +    + F   
Sbjct: 512 HVFLHGLV---RDAEGRKMSKSLGNGIDPLEIIDQYGADALRFTLVTGNSPGNDMRFHME 568

Query: 441 KVKEQSK 447
           K++    
Sbjct: 569 KLESSRN 575


>gi|409360|gb|AAA57558.1| valyl-tRNA synthetase [Lactobacillus casei]
          Length = 901

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 32  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 91

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 92  KRIEGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 121 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 178

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 179 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 210


>gi|315612009|ref|ZP_07886926.1| glutamate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315811|gb|EFU63846.1| glutamate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 486

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 99/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL           K Y  +
Sbjct: 57  RSQLENLRWLGIDWDESPETH--ANYRQSERLDLYQKYIDQLLAEG-----KAYKSYVTE 109

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKT 298
             +   R+  +A   +   +I+E   + G     +   I      G +    L   +S  
Sbjct: 110 EELAAEREHQEAAG-ETPRYINE---YLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+     +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWDAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|153801875|ref|ZP_01956461.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122586|gb|EAY41329.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 949

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|332967918|gb|EGK07008.1| isoleucine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 927

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 105/321 (32%), Gaps = 49/321 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++ L    + ++ P+     +QAM++      + R       +   +     + H     
Sbjct: 433 NNALKAVDDTEFFPVWGRARLQAMIEGRPDWVVSRQRFWGTPMTFFVHKETGELHPNSAD 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   + ++G      L   +  + + C+   K        + D +D   +  D   
Sbjct: 493 LLEQVAQKIEQKGINAWFELDKSELLSPEDCEQYDK--------LSDTMD---VWFDSGS 541

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F+      K + E  +   +Y+ GSD   G+ +       A   +     +L    V 
Sbjct: 542 THFSV----LKQRPELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAPYKQLLTHGFVV 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 598 ---DQNGRKMSKSIGNVVAPQEVYNEFGADILRLWTAATDYSGELAISKEILKRVTE--- 651

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPRV 508
                 +Y R R+          D +      + IPQ    E D   L L   L      
Sbjct: 652 ------SYRRIRNTLSFLFANLKDFN---PIEDAIPQADMVEIDRYALVLARQLQ----- 697

Query: 509 IENATIAQEPYKLAFYLYDLA 529
            E       P     Y +  A
Sbjct: 698 -EKIAGEYYP----RYAFHFA 713


>gi|269114822|ref|YP_003302585.1| Valyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322447|emb|CAX37182.1| Valyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 839

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 33/182 (18%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           + ++  +          I     N TG +H+GH     + DT+       GY+V      
Sbjct: 19  NDMKIFQTHDESKKPFTIILPPPNVTGNLHIGHALDNYISDTIIRFKKLQGYDV------ 72

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
                                L+   +D        V  K +  +  +KY         E
Sbjct: 73  ---------------------LWLPGTDHAGIATQAVVEKKLASQNINKY-----QLGRE 106

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +++  V ++ V    K I +  + L +  D               +  +   L   G +Y
Sbjct: 107 EFIKKVWEW-VDEYSKNIHNQWQKLGLALDYGFERFTLDDNSNEAVLKVFIELYENGLIY 165

Query: 288 EG 289
             
Sbjct: 166 RD 167


>gi|90101542|sp|Q7TUI9|SYV_PROMM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 929

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 55/192 (28%), Gaps = 34/192 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   +   SG+ +       G   ++     N TG +H+GH     + DT+       G 
Sbjct: 30  RWQCAWEESGVFHPDPQA-AGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQG- 87

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L    +D        +  K +  E   +Y  
Sbjct: 88  --------------------------KNVLCLPGTDHASIAVQTILEKQLKAEAISRYDL 121

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E  W    K+ S       I D L+ L    D          G  + +R+    
Sbjct: 122 GREAFLERAW--AWKEESG----GRIVDQLRRLGYSVDWQRQRFTLDEGLSAAVREAFVR 175

Query: 280 LARQGYVYEGIL 291
           L  QG +Y G  
Sbjct: 176 LHEQGLIYRGEY 187



 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 112/359 (31%), Gaps = 43/359 (11%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W  + +D+  +     I   L     +   +    +           ++     +   +
Sbjct: 405 RWQKVYRDWLTEIRDWCISRQLW-WGHRIPAWFVVSETDDQLTDATPYLVARSEEE--AW 461

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK--CKY 345
           +            + D D     F S +             G     +ADL  +      
Sbjct: 462 QQARDQFGEAVVIQQDEDVLDTWFSSGLWPFSTM-------GWPDQESADLECWYPTSTL 514

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG
Sbjct: 515 VTGFD-IIFFW-------VARMTMMAGAFTGRMPFADVYIHGLV---RDEQNRKMSKSAG 563

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I    +++  G+D++RF ++        D      ++      V   +    +  +  
Sbjct: 564 NGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNAT 623

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKL-- 521
           R A                     E D + LQL     L+   R+  +     + Y+L  
Sbjct: 624 RFALMN--------LGGETPASLGEPDPASLQLADRWILSRLARMNRDVVERYDSYRLGE 675

Query: 522 -AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL-NII 577
            A  LY+ A +     +    +        A+   L         A   ++   L +++
Sbjct: 676 AAKCLYEFAWNDICDWYLELSKRRLHPGEDASGEVLADQ----CTA-RQVLAKVLADLL 729


>gi|114567165|ref|YP_754319.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338100|gb|ABI68948.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 883

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 59/195 (30%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +      +G   +I     N TG +H+GH     + D L    
Sbjct: 13  PGQVENKWYEYWRENNYFAPRPDLEGKAFSIVMPPPNVTGSLHLGHALDNTLQDILTRWR 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++   R ++AL                     +E  
Sbjct: 73  RMQGYNAL-------WLPGTDHAGIATQARVEEAL--------------------AREGL 105

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY         EK+L  V ++      +I +  L  +    D          G    +R
Sbjct: 106 NKY-----ELGREKFLERVWEWKHLYGNRITQQ-LSLMGSSCDWSRERFTMDEGCSRAVR 159

Query: 275 DIIDNLARQGYVYEG 289
           ++  NL  +G +Y+G
Sbjct: 160 EVFVNLYEKGLIYQG 174


>gi|55980862|ref|YP_144159.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|61216139|sp|Q5SJV9|SYC_THET8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55772275|dbj|BAD70716.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 480

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 81/476 (17%), Positives = 148/476 (31%), Gaps = 104/476 (21%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R  VV D L   +   GY+V     I D G                
Sbjct: 29  CGPTVYADPHLGHARGPVVYDVLRRYLLHKGYKVRFVSNITDVG---------------- 72

Query: 188 ALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L ++  +  +       L+ +   E+A+KY+     F   + L +++          I 
Sbjct: 73  HLTDDADEGEDKIVRRAKLERLEPMEVAEKYTWSY--FDAMQALNVLRPSIAPRASGHIP 130

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---KSKTTQKCD 303
           + L+         ++E    RG             R+G VY  +   P   K    +  +
Sbjct: 131 EMLE---------LTERLLARGVAY---------ERKGSVYFRVRSFPEYGKLSGKRLEE 172

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS--------------DGSYTYFAADLAYFKCKYERGF 349
           +     +       D +D  L K+              +G   +     A        GF
Sbjct: 173 LRAGARVEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGF 232

Query: 350 DNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           D  ++  G D    + +   A A A   + A+  +    ++         KM+K  G+ +
Sbjct: 233 D--LHAGGIDLQFPHHECEIAQAEAAGFRFARHWMHHNHVL-----LEGEKMAKSTGNLV 285

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L  +++     ++RF +L       +DF +  ++   +      + +AY   R   + A
Sbjct: 286 LLHDLLEAHEPMALRFYLLQTHYRSPMDFTWEGLESAKRG--YGRLLHAYREVRGRKKTA 343

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528
                       P      E   D  E         +   IE+      P         L
Sbjct: 344 P-----------PGTTPELERALDALEKA-------FMEAIED--DLSTP-------EAL 376

Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584
           A++F          P L  +    +  ++ R     AV   +  G  I+G+  P  
Sbjct: 377 AALF-------AFLPELHKLLPEAKAESLAR---AEAVFHTLGEG--ILGL-FPER 419


>gi|126461470|ref|YP_001042584.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166225527|sp|A3PHJ6|SYV_RHOS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|126103134|gb|ABN75812.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 987

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 61/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     ++  +   +G         +     I     N TG +H+GH     + D L   
Sbjct: 9   AAEAEARLYDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG     +                               V +EL
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQMV-------------------------------VEREL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A   +        E +L  V ++  Q+    I + LK L    D   +           +
Sbjct: 98  ARAGNPGRREMGREAFLEKVWEWKEQSG-GTIVNQLKRLGASCDWSRNAFTMDPNFQRAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G++Y G          +    D +
Sbjct: 157 LKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLE 190



 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +     V +  LV   RD    KMSK  G+
Sbjct: 593 TGFD-IIFFW-------VARMMMMQLAVVNEVPFKTVYVHALV---RDEKGKKMSKSLGN 641

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 642 VLDPLELIDEFGADAVRFTL 661


>gi|71018857|ref|XP_759659.1| hypothetical protein UM03512.1 [Ustilago maydis 521]
 gi|46099417|gb|EAK84650.1| hypothetical protein UM03512.1 [Ustilago maydis 521]
          Length = 1240

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 60/215 (27%), Gaps = 36/215 (16%)

Query: 79  DSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTG 134
           +   ++G    G+  L++  S+ +    S      E   +      K   I     N TG
Sbjct: 263 EKKDLSGPMESGYNPLHVEQSWYQWWEKSNHFKPAEPTESDPYDPEKTFIIPAPPPNVTG 322

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
            +H+GH     + DTL      +GY        N           SV             
Sbjct: 323 SLHIGHALTISIQDTLIRWYRMNGYRTL----FNPGYDHAGIATQSV------------- 365

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
                         V K LA        ++  EK+L  V  +      +I    ++ L  
Sbjct: 366 --------------VEKRLAKTEGKSRHDYGREKFLEKVFAWKDDYQSRISNQ-MRRLGA 410

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            +D               + +    L   G +Y  
Sbjct: 411 SYDFSREAFTMDPVRSKAVTEAFCKLHEDGIIYRA 445


>gi|254561520|ref|YP_003068615.1| isoleucine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254268798|emb|CAX24759.1| isoleucine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 991

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 88/234 (37%), Gaps = 29/234 (12%)

Query: 319 DVDRPLLKSDGSYTYFAADLAYF------KCKYERGFDNMIYVMGSDHS-GYVKRLEAVA 371
           DV      S  ++ +   D   F      +   + G D ++Y+ GSD   G+ +    + 
Sbjct: 575 DVLDVWFDSGSTHAFVLDDAQAFPGLSGIRRAVDGGPDTVMYLEGSDQHRGWFQSS--LL 632

Query: 372 AAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            +   +  A  +V+L     L  D    KMSK  G+ +  ++V+ E G+D +R  +    
Sbjct: 633 ESCGTRGHAPYDVVLTHGFVL--DAKGEKMSKSRGNVVAPQNVIKESGADILRLWVAAAD 690

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            S+ L      VK  ++          Y + R+  R              P + +P  +E
Sbjct: 691 YSDDLRIGPEIVKTFAE---------TYRKLRNSLRWMLGSLAHR----VPGDDVP-FTE 736

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD--LASVFHGHWSHGREN 542
               E  ++  LA+    I +A  A +  ++   L +  +       +   R++
Sbjct: 737 MPELERFILHRLAQLDGEIRDAYAAFDTKRIVA-LLNGFMTGDLSAFYFDVRKD 789


>gi|251780852|ref|ZP_04823772.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085167|gb|EES51057.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 880

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 57/203 (28%), Gaps = 37/203 (18%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P      +         +   +        I     N TG +H+GH     + 
Sbjct: 6   NIATTYDPKEFEDRIYKTWEEKGYFTPVVDKNKKPFTIIMPPPNITGELHLGHAFDDTLQ 65

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYL 206
           D L       GY                    +  W            LP E +      
Sbjct: 66  DMLIRFKRMQGY--------------------AALW------------LPGEDHASIATE 93

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             V  ELA K          E +L  V ++S       IR+ +K L +  D         
Sbjct: 94  VKVANELA-KQGYNKKEMGREAFLEKVWEWSDDY-RARIRNQVKKLGVSADFTREAFTMD 151

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
               + ++ +   L  +G +Y+G
Sbjct: 152 ENLSAAVKHVFVKLYNEGLIYQG 174


>gi|188587843|ref|YP_001921655.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498124|gb|ACD51260.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 880

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 57/203 (28%), Gaps = 37/203 (18%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P      +         +   +        I     N TG +H+GH     + 
Sbjct: 6   NIATTYDPKEFEDRIYKTWEEKGYFTPVVDKNKKPFTIIMPPPNITGELHLGHAFDDTLQ 65

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYL 206
           D L       GY                    +  W            LP E +      
Sbjct: 66  DMLIRFKRMQGY--------------------AALW------------LPGEDHASIATE 93

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             V  ELA K          E +L  V ++S       IR+ +K L +  D         
Sbjct: 94  VKVANELA-KQGYNKKEMGREAFLEKVWEWSDDY-RARIRNQVKKLGVSADFTREAFTMD 151

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
               + ++ +   L  +G +Y+G
Sbjct: 152 ENLSAAVKHVFVKLYNEGLIYQG 174


>gi|71083652|ref|YP_266372.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|90101540|sp|Q4FM20|SYV_PELUB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71062765|gb|AAZ21768.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 875

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 102/335 (30%), Gaps = 79/335 (23%)

Query: 100 KILSSIVVSGIE--YGRNLIGKGTKVNIEFVS----ANPTGPMHVGHCRCAVVGDTLASL 153
           K + + V   I   + +N + K TK   +F       N TG +H+GH     + D L   
Sbjct: 5   KYIHTDVEDKIYSYWEKNNLFKPTKNKKQFSVVIPPPNVTGSLHMGHALNNSIQDLLVRY 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              + YE              +   ++     ++ L  +  D  E             E 
Sbjct: 65  HRMNNYETL-------WQPGTDHAGIATQALVEKKLTADGIDKNEIGR--EKFIEKVWEW 115

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +++   +LN                         LK L    D   +           +
Sbjct: 116 KEEHGDIILNQ------------------------LKKLGCSCDWSRNAFTMDENLSKSV 151

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
             +   L ++G +Y       K K     D      + ++ +   +VD+  + S      
Sbjct: 152 LKVFVELHKKGLIY-------KDKKLVNWD-----TVLKTAISDLEVDQREVNS------ 193

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----AVSEKKAQINVLLCELV 389
               + Y +   E   D +             R E +      AV+ K  +   L+ + V
Sbjct: 194 ---KIYYIQYPIEASSDFITIAT--------TRPETMLGDTAIAVNPKDDRFKHLVGKFV 242

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            +   G  IK+       I   +   E+G+ +++ 
Sbjct: 243 TVPIVGKKIKI-------IEDEYADPEMGTGALKI 270



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+        +K+   +V +  LV   +D    KMSK  G+
Sbjct: 484 TGFD-IIFFW-------VARMIMFGMEFLDKEPFKDVYVHALV---KDEKGQKMSKSKGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVK 443
            I    ++++  +D++RF +L        +     +VK
Sbjct: 533 VINPLDLIEKYSADALRFTLLSMASPGTDVKLSEDRVK 570


>gi|304372814|ref|YP_003856023.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309005|gb|ADM21485.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 824

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 34/196 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + S++ K ++   +    +  N   K     I     N TG +H+GH   + + DT+   
Sbjct: 6   NHSFVEKNINQKWIDKKYFVANRNPKKPFSII-LPPPNVTGKLHLGHAWDSYLQDTIIRF 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+V     ++ AG       ++   + ++ L   +                    
Sbjct: 65  KKLKGYDVLFLPAVDHAG-------IATQAKVEEKLLKQNI------------------- 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +   +K+L  V ++  +     I++    L +  D               +
Sbjct: 99  ------KKEDLGRQKFLEKVFEWKDEYYQN-IKEQWFKLGLGFDYTKERFTLDPQAQEAV 151

Query: 274 RDIIDNLARQGYVYEG 289
            D+   L ++G++Y+ 
Sbjct: 152 SDVFVTLYKKGFIYKA 167


>gi|293363352|ref|ZP_06610174.1| glutamate--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292553021|gb|EFF41772.1| glutamate--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 468

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 60/411 (14%), Positives = 133/411 (32%), Gaps = 74/411 (18%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L         +   ++   +Q+  LA 
Sbjct: 9   APSPTGYLHIGGARTALFCYLFAKHFKGDFIFRLED----TDIKRNVVDGEKSQLENLAW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S   + +    Y +    E   + ++ L+             ++ +
Sbjct: 65  L-------GIIPDESPFKKAHDIFNYRQSEKLERYSEIANHLIKLG----------HAYK 107

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A      D+L+    Q D        +  +   +             Y   L  P  K  
Sbjct: 108 AYDNT--DELEEQKKQSDAAGIPSFRYNRNWLKLSQEEILKRDAAKEYSIRLKMPNDKIY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R ++ F S  +GD     + KSDG  TY   + A     ++    +++   G +
Sbjct: 166 EWDDIVRGKISFNSADLGDW---VIYKSDGYPTY---NFAVVVDDFDMRISHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-RHVVDE-- 416
           H G   +  A+   ++ +  +        + +  +    K+SKR            +E  
Sbjct: 218 HIGNTPKQLALYDMLNWQAPKFGH-----LTIITNMEGQKLSKRDTSLKQFIEDYKNEGY 272

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                      +G  S     L  K   +  FD  ++ +   +  +  +Q+         
Sbjct: 273 SPEAVFNFLALLGWTSADATELMNKEELIYKFDPTRLSKSPSKFDITKMQW--------- 323

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
             +K    + D +     +  ++S   + E  L+     +    + +    
Sbjct: 324 -FSKQYIKNTDNEQLLTLLNLKDSLNFSKEWLLL-----FIDTFKQSAYTL 368


>gi|218132714|ref|ZP_03461518.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992440|gb|EEC58443.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
           43243]
          Length = 676

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 71/452 (15%), Positives = 136/452 (30%), Gaps = 68/452 (15%)

Query: 85  GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G  F+   +S S   +     +    +Y            I + S  P    H+G+    
Sbjct: 6   GGRFLVFKISASKRAEERKQTMEDKKKYYITTA-------IAYTSGKP----HIGNTYEI 54

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V+ D++A      GY+V  +   ++ G +I   A       Q+ + N   ++        
Sbjct: 55  VLADSIARYKRQQGYDVFFQTGTDEHGQKIELKAEEAGISPQEFVDNVSGEIK------- 107

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISED 263
            +  +     +K+      + E++   I K    Q    I +   + +     + F +  
Sbjct: 108 RIWDLMDTSYNKFIRTTDKYHEKQVQKIFKKLYDQG--DIYKGFYEGMYCTPCESFFTAS 165

Query: 264 DFHRGD----------------PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ-----KC 302
               G                    +    + L      +   + P   K        K 
Sbjct: 166 QLVDGKCPDCGRPCQPAREEAYFLKLGKYTNKLIEHIESHPEFIQPESRKNEMMNNFIKA 225

Query: 303 DMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNM---- 352
            +    +   S   G     DD     +  D    Y    L Y      +  F+      
Sbjct: 226 GLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITG-LGYDVDGNSDENFNKYWPAD 284

Query: 353 IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           ++++G D    H+ Y      +  A+     +       L++   DG   KMSK  G+ I
Sbjct: 285 LHLIGKDILRFHTIY---WPIMLMALGLPLPKQIFGHPWLLQG--DG---KMSKSKGNVI 336

Query: 409 TLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
               +VD  G D+VR+ +L            +  + E+   +    +       R+I   
Sbjct: 337 YADDLVDMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANTL--GNLVNRTIAMS 394

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            K    D++      +         T    LI
Sbjct: 395 NKYFGGDVNDTSATTDFDEDLKRVVTGTKALI 426


>gi|332686216|ref|YP_004455990.1| methionyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370225|dbj|BAK21181.1| methionyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 671

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 116/342 (33%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    V  D +A      G++V     +++ G +I   A  +          
Sbjct: 15  PSGKLHIGNAYTTVACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAEELEIS------- 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++ D +  + L+   +K++    DY  +A+ KI    ++ 
Sbjct: 68  ----------PQTYVDQMANDIQDLW--QTLDISYDKFIRTTDDYHKEAVQKIFDRLVEQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S  D      + + ++  +       G    G       + +    M 
Sbjct: 116 GDIYLGEYQGWYSVSDEEYFTETQLAEVYKDEEGNVIGGKAPSGHEVELVKEESYFLRMS 175

Query: 306 RKQLLFRS--TMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERGF------DNMIY 354
           +             + +     K++    +      DLA  +  +  G        +++Y
Sbjct: 176 KYSDRLLDYYNEHPEFIQPEFRKNEMINNFIKPGLEDLAVSRTSFSWGIPLKNDPKHVVY 235

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                SD+  + K   A    V ++  + + +   ++ +  D      
Sbjct: 236 VWIDALSNYITALGYNSSDNHLFEKYWPANVQVVGKEIMRFHTIYWPIMLMALDLPLPKK 295

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +V+  G D+ R+ +L 
Sbjct: 296 IFGHGWLLMKDGKMSKSKGNVIYPEVLVERYGLDAFRYYLLR 337


>gi|310830393|ref|YP_003965494.1| Valyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309249860|gb|ADO59426.1| Valyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 888

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 69/269 (25%), Gaps = 40/269 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    +      +    +      +     I     N TG +H+GH     + D + 
Sbjct: 15  TYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLHIGHALDFTLQDIII 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+                                   LP   + G+  +   +
Sbjct: 75  RAKRMQGYDAL--------------------------------WLPGADHAGIATQTKVE 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   EK+L  V ++     +  I +  + +    D          G   
Sbjct: 103 QKLREEGLTRYDLGREKFLEKVWEWK-DLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSK 161

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +R++   L ++G +Y G          +    D +            +  PL    G  
Sbjct: 162 AVREVFVKLYQKGLIYRGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFI 221

Query: 332 TYFAA-------DLAYFKCKYERGFDNMI 353
           T           D A      +  +  MI
Sbjct: 222 TVATTRPETMLGDTAVAVHPEDERYKEMI 250



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 79/220 (35%), Gaps = 41/220 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           W+  V+D+ +   +         +   +D    E      DP+ + +           Y 
Sbjct: 403 WIENVRDWCISRQLWWG----HRIPAWYDQESGEVIVSAEDPTTLPE-----------YA 447

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G                   L   ST+   +    L +      Y+  ++         G
Sbjct: 448 GRKLIQDEDVLDTWFSS--ALWPFSTLGWPEQTEDLKR------YYPTNV------LVTG 493

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D +IY         V R+   A   +E+    +VL+  LV   RD    KMSK  G+ +
Sbjct: 494 YD-IIYFW-------VSRMIFTALEFTEEIPFKDVLMHGLV---RDADGRKMSKSLGNGV 542

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
               V+D+ G+D++R+M+       + L F + +V++   
Sbjct: 543 DPLDVIDQYGTDAMRYMISTSSTPGQDLRFRWERVEQARN 582


>gi|295425358|ref|ZP_06818061.1| leucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065134|gb|EFG56039.1| leucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 804

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/345 (18%), Positives = 110/345 (31%), Gaps = 56/345 (16%)

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              +L +  Y G   KH+  E  D      LN  E K   I          K +   L+ 
Sbjct: 360 EGGNLEKEAYTGD-GKHINSEFLD-----GLNIEEAKKRMIQWLEDHNCGKKKVNYKLRD 413

Query: 252 LNIQHDIFISE----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +     +  E      +  G  S + +  D L  +      I P    ++      D  
Sbjct: 414 WDFSRQRYWGEPIPVIHWEDGTTSLVPE--DELPLRLPHATNIKPSGTPESPLANLTDWV 471

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDH 360
            ++ ++   G      +    GS  Y+   +     K    +D +       +Y+ G++H
Sbjct: 472 NVVDKNGRKGKRETNTMPNWAGSSWYYLRYVDPHNDKELANYDLLKQWLPVDLYIGGAEH 531

Query: 361 S----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRH 412
           +     Y +    V   +     +         RLY  G+      KMSK  G+ +    
Sbjct: 532 AVRHLLYARFWHKVLYDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDD 586

Query: 413 VVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
           V+DE G+DS+R + M        +D+D           P               ++  D 
Sbjct: 587 VIDEYGADSLRMYEMFMGPLDASIDWD--------DNGPAST------------KKFLDR 626

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
              L  +      IPQE   D ++ +L      Y   ++  T   
Sbjct: 627 VWRLMVNDLDLKAIPQEKIVDENDGELDKV---YNETVKKVTEDF 668


>gi|223985467|ref|ZP_03635526.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
           12042]
 gi|223962556|gb|EEF67009.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
           12042]
          Length = 642

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 121/383 (31%), Gaps = 59/383 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      GY+V  +   ++ G +I   A + 
Sbjct: 8   TTAIAYTSGKP----HIGNTYEIVLADSIARYKRMLGYDVFFQTGTDEHGQKIEDKAKAA 63

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               QQ +      + E       +  +     DK+        E +   I K    Q  
Sbjct: 64  GVAPQQFVDQVAGQIKE-------IWDLMNTSYDKFMRTTDPDHERQVQKIFKKLYDQG- 115

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPK 295
             I + + +    +  + F +E     G        ++    + Y      Y   L    
Sbjct: 116 -DIYKSEYEGWYCKPCESFFTESQIVDGKCPDCGAPVEKAKEEAYFFRMSKYADRLLKHI 174

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +  +    + ++    +  +   + + L  S  S+T+            +    +++YV
Sbjct: 175 EENPEFIQPESRKNEMINNFIKPGL-QDLCVSRTSFTWGVP--------VDFDPKHVVYV 225

Query: 356 M---------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG---- 395
                             +H    K    A    + +   + + +   ++ +  D     
Sbjct: 226 WIDALTNYITGLGYDCDGNHGEKFKHYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPK 285

Query: 396 ----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
                        KMSK  G+ I    +V   G D+VR++ML     ++     +  + E
Sbjct: 286 QVFGHPWLLVGEGKMSKSKGNVIYADDLVRYFGVDAVRYIMLHEMPFAQDGTVTYELMIE 345

Query: 445 QSKENPVFYVQYAYARCRSIFRQ 467
           +   +    +     R  S+  +
Sbjct: 346 RINSDLANILGNLVNRTLSMTNK 368


>gi|91763307|ref|ZP_01265271.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717720|gb|EAS84371.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 875

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 103/339 (30%), Gaps = 79/339 (23%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS----ANPTGPMHVGHCRCAVVGDT 149
           +  Y+   +   + S   + +N + K TK   +F       N TG +H+GH     + D 
Sbjct: 3   NDKYIHTDVEDKIYS--YWEKNNLFKPTKNKKQFSVVIPPPNVTGSLHMGHALNNSIQDL 60

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L      + YE              +   ++     ++ L  +  D  E           
Sbjct: 61  LVRYHRMNNYETL-------WQPGTDHAGIATQALVEKKLTADGIDKNEIGR--EKFIEK 111

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E  +++   +LN                         LK L    D   +        
Sbjct: 112 VWEWKEEHGDIILNQ------------------------LKKLGCSCDWSRNAFTMDENL 147

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +   L ++G +Y       K K     D      + ++ +   +VD+  + S  
Sbjct: 148 SKSVLKVFVELHKKGLIY-------KDKKLVNWD-----TVLKTAISDLEVDQREVNS-- 193

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----AVSEKKAQINVLL 385
                   + Y +   E   D +             R E +      AV+ K  +   L+
Sbjct: 194 -------KIYYIQYPIEASSDFITIAT--------TRPETMLGDTAIAVNPKDDRFKHLV 238

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + V +   G  IK+       I   +   E+G+ +++ 
Sbjct: 239 GKFVTVPIVGKKIKI-------IEDEYADPEMGTGALKI 270



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+        +K+   +V +  LV   +D    KMSK  G+
Sbjct: 484 TGFD-IIFFW-------VARMIMFGMEFLDKEPFKDVYVHALV---KDEKGQKMSKSKGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVK 443
            I    ++++  +D++RF +L        +     +VK
Sbjct: 533 VINPLDLIEKYSADALRFTLLSMASPGTDVKLSEDRVK 570


>gi|87162044|ref|YP_493176.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|161508736|ref|YP_001574395.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294850349|ref|ZP_06791082.1| metS [Staphylococcus aureus A9754]
 gi|87128018|gb|ABD22532.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|160367545|gb|ABX28516.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294822773|gb|EFG39209.1| metS [Staphylococcus aureus A9754]
 gi|315196171|gb|EFU26527.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320144201|gb|EFW35969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 657

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKSGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|240015827|ref|ZP_04722367.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 929

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IGDAVQQADMVEIDRYALVLARRLQE 700


>gi|254508960|ref|ZP_05121067.1| tRNA synthetases class I (I, L, M and V) family [Vibrio
           parahaemolyticus 16]
 gi|219548135|gb|EED25153.1| tRNA synthetases class I (I, L, M and V) family [Vibrio
           parahaemolyticus 16]
          Length = 655

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 32/243 (13%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVD--------RPLLKSDGSYTYFAADLAYF 341
               K  Q  +    Q  +    S ++G++ D          +    G   Y   D    
Sbjct: 209 ELIEKVAQLVEQKGIQAWWDLEISDLLGEEADNYEKVLDTLDVWFDSGVTHYSVVD---A 265

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           + +Y  G    +Y+ GSD   G+ +     + A+ ++     VL    V    DG   KM
Sbjct: 266 REEYN-GASADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGQGRKM 321

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 322 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 372

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L       +++P E         +   LA    ++  A      + 
Sbjct: 373 IRNTAR---FFLANLSGFNPATDLVPAEEMVALDRWAVGRALAAQEEIV-KAYGEYNTHA 428

Query: 521 LAF 523
           +  
Sbjct: 429 VTQ 431


>gi|315186220|gb|EFU19981.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 882

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I ++ +  G    R  +GK   + I     N TG +H+GH     + D L    
Sbjct: 15  KEFEERIYATWMDHGAFMPREGVGKPFVIVI--PPPNVTGVLHMGHGLNNSLQDILIRYH 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + AG    ++     W                   GV  + +G+   
Sbjct: 73  RMKGEPTLWIPGTDHAGIATQSVVERKLWS-----------------QGVDPRSLGR--- 112

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK++ I   ++++   KII + LK +    D          G    +R
Sbjct: 113 ------------EKFVEITWQHALEH-KKIIINQLKKIGASCDWSRERFTLDEGLSKAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++  +L  +G +Y G      S   +    D +
Sbjct: 160 EVFVSLYEKGLIYRGTYLVNWSPGLKTALADDE 192


>gi|168213448|ref|ZP_02639073.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170715012|gb|EDT27194.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 645

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 117/348 (33%), Gaps = 78/348 (22%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    +H+G+    V  D +A     +G+EV      ++ G +I  +A        
Sbjct: 14  YPSTN----LHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE------ 63

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +
Sbjct: 64  -----------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFK 110

Query: 247 DDLKALNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 +I  D +             E     G+       ++    + Y ++      +
Sbjct: 111 KLYDQGDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADR 170

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD- 350
                +   D  Q   R   + ++  RP             DL   +  +  G    FD 
Sbjct: 171 LIQYIEEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDE 220

Query: 351 -NMIYVM-------------GSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++IYV              G +    Y K   A    + +   + + +   ++ +    
Sbjct: 221 KHVIYVWIDALSNYITALGYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGL 280

Query: 396 M--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                            KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 281 ELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|325264425|ref|ZP_08131156.1| methionine--tRNA ligase [Clostridium sp. D5]
 gi|324030496|gb|EGB91780.1| methionine--tRNA ligase [Clostridium sp. D5]
          Length = 645

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 133/418 (31%), Gaps = 64/418 (15%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G+  G  ++ +  K  I    A  +G  H+G+    V+ D +A      GY+V  +   +
Sbjct: 3   GVLKGERIMSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTD 62

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           + G +I   A       ++ + +  +D+         +  +     DK+        E++
Sbjct: 63  EHGQKIELKAEEAGITPKEFVDDVAADI-------RRIWDLMDTSYDKFIRTTDEDHEKQ 115

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              I K    Q    I +   + +     + F +E     G        +     + Y +
Sbjct: 116 VQKIFKKLFDQG--DIYKGHYEGMYCTPCESFFTESQLADGKCPDCGREVQPAKEEAYFF 173

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           +      +         +  Q + R   + ++   P             DL   +  ++ 
Sbjct: 174 KMSKYADRLIEHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKW 223

Query: 348 G----FD--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           G    FD  +++YV                 G++   + K   A    + +   + + + 
Sbjct: 224 GIPVEFDPKHVVYVWLDALTNYITGIGYDCDGNNTEQFKKDWPADLHLIGKDIIRFHTIY 283

Query: 386 CELVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
             +  +  D                  KMSK  G+ +    +VD  G D+VR+ +L    
Sbjct: 284 WPIFLMALDLPLPKQIFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMP 343

Query: 432 -SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
                   +  + E+        +     R  S+  +        K +  ++D DL  
Sbjct: 344 FENDGVISWELMVERLNSELANTLGNLVNRTVSMTNKYFAGTVCDKGVAEEVDADLKA 401


>gi|239998201|ref|ZP_04718125.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268594054|ref|ZP_06128221.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547443|gb|EEZ42861.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317163487|gb|ADV07028.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 929

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|254478609|ref|ZP_05091982.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214035463|gb|EEB76164.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 879

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 74/270 (27%), Gaps = 41/270 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      + S  +    +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPKEFEDKIYSFWMEKGFFTPKIAPHKKPFTIVIPPPNVTGELHMGHALDNTLQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +    +        +      +L     
Sbjct: 67  RWRRMQGYAAL-------WIPGTDHASIATEIKVLDKIREETGKTKKDLTREEFL-EKAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DKY + +L+                         LK L    D   +          
Sbjct: 119 EWKDKYENRILSQ------------------------LKKLGSSCDWTRTAFTMDEKRSK 154

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +R++  +L  +G +Y+G              S    +    +  L +    V  + D  
Sbjct: 155 AVREVFVSLYEKGLIYKGNRIINWCPSCNTALSDAEVEHKEHKGHLWYIKYPVKGEEDYV 214

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           ++ +         D+A      +  + ++I
Sbjct: 215 VIATT-RPETMLGDVAVAVHPEDERYKHLI 243



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 89/250 (35%), Gaps = 44/250 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      + E   +  ++      L 
Sbjct: 470 TEDLKYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFMKEIPFKYVLIHG----LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPV 451
           RD +  KMSK  G+ I    V+++ G+D++RF ++        + F + KV+        
Sbjct: 519 RDALGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSWEKVEHSRNF--- 575

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                   +  +  R       + D +L+  N+   +             L  Y  +++ 
Sbjct: 576 ------ANKLWNASRYVLLNLDENDTNLYIDNLTLADKWI----------LTRYNNIVKE 619

Query: 512 ATIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            T   E ++L   A  LYD   S F   +      P L       +K+T   L       
Sbjct: 620 VTDNLEKFELGVAASKLYDFVWSEFCDWY-IELSKPVLYSDNEEAKKVTKSVL------R 672

Query: 568 SIINSGLNII 577
            ++++ L ++
Sbjct: 673 YVLDNTLRLL 682


>gi|240124950|ref|ZP_04737836.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268683529|ref|ZP_06150391.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268623813|gb|EEZ56213.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 929

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|218282236|ref|ZP_03488535.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
 gi|218216774|gb|EEC90312.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
          Length = 870

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 35/191 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                + +  G     +L  +   + I     N TG +H+GH     + D L       G
Sbjct: 14  NDKYQNWIEKGYFTAGDLSKRPYCIVI--PPPNVTGKLHLGHAWDTTLQDILCRYKRLKG 71

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V          A ++   ++   +    L +           G+    +G+E      
Sbjct: 72  YDVC-------WVAGMDHAGIATQAKVDARLKSE----------GISRYDIGRE------ 108

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W         +     IR     L +  D          G    +R +  
Sbjct: 109 ----KFLERAW------EWKEEYASTIRSQWAKLGLSLDYSRERFTLDDGLSHAVRKVFV 158

Query: 279 NLARQGYVYEG 289
           +L + G +Y+G
Sbjct: 159 DLYKDGLIYQG 169



 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 99/311 (31%), Gaps = 69/311 (22%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA- 339
              G +Y G +  PK     K D D     F S +           S   +    ADL  
Sbjct: 419 KETGEIYVG-MEDPKDIENWKQDEDVLDTWFSSAL--------WPFSTLGWPETTADLER 469

Query: 340 YFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           YF       G+D +I+   +  +    +          K    +VL+  LV   RD    
Sbjct: 470 YFPNDVLVTGYD-IIFFWVARMA---FQTRYCMKNRPFK----DVLIHGLV---RDTQGR 518

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVF 452
           KMSK  G+ I    V+ E G+D++RF +       + L FD  K+           N   
Sbjct: 519 KMSKSLGNGIDPMDVIQEKGADALRFFLTTNSTPGQDLRFDETKMDASWNFINKIWNAAR 578

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YVQ           Q  D  P+LD                         LA +  V+++ 
Sbjct: 579 YVQM----------QIGDTKPELDMTKANSVDKWI--------------LARFNEVLDHV 614

Query: 513 T---IAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +      E   +   LY      F   +           + + +         LV    +
Sbjct: 615 STNMDKYELAIVGNELYSFVWDDFCSWY----IELSKATLYSEDES-------LVANTKA 663

Query: 569 IINSGLNIIGV 579
           ++ + +  +G+
Sbjct: 664 VLYTVM--MGI 672


>gi|151220702|ref|YP_001331524.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|172048773|sp|A6QEI0|SYE_STAAE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|150373502|dbj|BAF66762.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
          Length = 484

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMQISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|116493239|ref|YP_804974.1| glutamyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265297|sp|Q03E40|SYE_PEDPA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116103389|gb|ABJ68532.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase [Pediococcus
           pentosaceus ATCC 25745]
          Length = 495

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 102/308 (33%), Gaps = 35/308 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
               K+ + + + +PTG +H+G+ R A+     A       ++     + +R    +   
Sbjct: 1   MAKQKIRVRY-APSPTGHLHIGNARTALFNYLFARHYKGKFILRIEDTDQSR-NIADGEK 58

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
           +QI+ L     W         D     G Y     K + + L D+  +E           
Sbjct: 59  SQIDNL----KWLGMDWDEGPDKPGEYGPYRQSERKGIYQPLIDQLVAEG---------K 105

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             + Y  +  +   R++ +  N +   ++  D++    P      I +    G       
Sbjct: 106 AYESYMTEEELAAQREE-QKANGEMPHYV--DEYAGLSPEQKEQKIADAKAAGIEPVIRF 162

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P + T +  D+ +  + F S  +G D    + K DG  TY   + A     +     +
Sbjct: 163 KVPTNTTYEWDDLVKGHISFESETIGGDF--VIQKRDGMPTY---NFAVVVDDHMMEISH 217

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +    G DH     +   +  A+     Q   +   +          K+SKR    +   
Sbjct: 218 V--FRGDDHVANTPKQLMIYEALGWDAPQFGHMSLIINTE----TGKKLSKRDESILQFI 271

Query: 412 HVVDEVGS 419
                +G 
Sbjct: 272 EQYRSLGY 279


>gi|57651404|ref|YP_185460.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|67461618|sp|Q5HIE7|SYE_STAAC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|57285590|gb|AAW37684.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 484

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMQISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|325281327|ref|YP_004253869.1| glutamyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313136|gb|ADY33689.1| glutamyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 506

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 100/290 (34%), Gaps = 42/290 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAF--SGYEVTREYYINDAGAQINTL 177
           + +PTG +H+G  R A+          GD L  +     + Y    E YI          
Sbjct: 10  APSPTGALHLGGVRTALFNYLFARHYGGDFLLRIEDTDQTRYVPGAEEYI---------- 59

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             S+ W   +     D  +  G     Y +   KE+  KY+ +L+      +      + 
Sbjct: 60  IESLKWCGLKV----DEGVGVGGEYSPYRQSERKEIYKKYALQLVESGNAYY-----SFD 110

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +  +R + +          +     +   +     +  L   G  Y      P+ +
Sbjct: 111 TAEELDAMRKECEGRGETFIYNATSRGKLKNSLNMDAGKVKQLLEAGVHYVIRFKMPEHE 170

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D+ R ++ F S+++    D+ L KSDG  TY    LA     +     ++I   G
Sbjct: 171 DLLLHDIIRGEVHFNSSLLD---DKVLYKSDGMPTYH---LANIVDDHLMKITHVIR--G 222

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGD 406
            +    +     +  A   +        L  +++   +G   K+SKR G+
Sbjct: 223 EEWLPSLPLHVLLYKAFGWEDTMPEFAHLPLILKPVGNG---KLSKRDGN 269


>gi|293397732|ref|ZP_06641938.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611678|gb|EFF40747.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 929

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|225019373|ref|ZP_03708565.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
 gi|224948004|gb|EEG29213.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
          Length = 883

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 52/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP      +         +      +     I     N TG +H+GH     + D L   
Sbjct: 20  SPKQFEDKIYQFWQEKEYFRAKPDPEKKPYTIVIPPPNITGQLHMGHALDETLQDILIRW 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +  +A+        +    G   +    E 
Sbjct: 80  RRMQGYAAL-------WVPGTDHASIATEAKIVEAMKQEGLTKEDLGRDGFLKR--AWEW 130

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                           I + LK L    D          G    +
Sbjct: 131 KEKYGGR------------------------IVEQLKKLGSSCDWSRERFTLDEGCSEAV 166

Query: 274 RDIIDNLARQGYVYEG 289
           +++  NL  +G +Y G
Sbjct: 167 QEVFINLYNKGLIYRG 182


>gi|221638390|ref|YP_002524652.1| valyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783556|sp|B9KMT9|SYV_RHOSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|221159171|gb|ACM00151.1| Valyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 987

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 61/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     ++  +   +G         +     I     N TG +H+GH     + D L   
Sbjct: 9   AAEAEARLYDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG     +                               V +EL
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQMV-------------------------------VEREL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A   +        E +L  V ++  Q+    I + LK L    D   +           +
Sbjct: 98  ARAGNPGRREMGREAFLEKVWEWKEQSG-GTIVNQLKRLGASCDWSRNAFTMDPNFQRAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G++Y G          +    D +
Sbjct: 157 LKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLE 190



 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +     V +  LV   RD    KMSK  G+
Sbjct: 593 TGFD-IIFFW-------VARMMMMQLAVVNEVPFKTVYVHALV---RDEKGKKMSKSLGN 641

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 642 VLDPLELIDEFGADAVRFTL 661


>gi|90101527|sp|P36420|SYV_LACCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 50.3 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + +      +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 14  DHKAVEEGRYQEWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQ 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 74  KRIEGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++      K I      + +  D         +G    +
Sbjct: 103 -RKEGISRYDLGREKFVQKVWEWK-DEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAV 160

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +  +L  QG +Y G          +    D
Sbjct: 161 RRVFVDLYNQGLIYRGEYIVNWDPQARTALSD 192


>gi|307824332|ref|ZP_07654558.1| valyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734712|gb|EFO05563.1| valyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 931

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 91/326 (27%), Gaps = 68/326 (20%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           ++   +    G    ++    G    I     N TG +H+GH     + D L       G
Sbjct: 12  QRWYQTWEEKGYFAAKSE---GESYCIMIPPPNVTGSLHMGHAFQDTIMDALTRYHRMKG 68

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +    +   + AG     +                                 + L +   
Sbjct: 69  FSTLWQPGTDHAGIATQMVV--------------------------------ERLCNAED 96

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               ++  EK++  + ++  ++   I R  L+ +    D          G    ++++  
Sbjct: 97  KTRHDYGREKFIEKIWEWKEESGGTITRQ-LRRMGSSLDWNKERFTMDDGMSDAVQEVFI 155

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L  +G +Y G               D + L          +  PL  S+G         
Sbjct: 156 RLYEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEENGSMWHLRYPL--SNGQGHLIV--- 210

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                + E        ++G             A A+     +   LL E V L   G  I
Sbjct: 211 --ATTRPET-------MLGD-----------AAVAIHPNDERYKHLLGEFVELPLTGRRI 250

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRF 424
            +       I   +V  E G+  V+ 
Sbjct: 251 PI-------IADEYVDPEFGTGCVKI 269


>gi|240112173|ref|ZP_04726663.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268598230|ref|ZP_06132397.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268582361|gb|EEZ47037.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 929

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IGDAVQQADMVEIDRYALVLARRLQE 700


>gi|59800532|ref|YP_207244.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|240122757|ref|ZP_04735713.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268681358|ref|ZP_06148220.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|81311263|sp|Q5FAF5|SYI_NEIG1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59717427|gb|AAW88832.1| putative isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|268621642|gb|EEZ54042.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 929

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|294793183|ref|ZP_06758329.1| isoleucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294794787|ref|ZP_06759922.1| isoleucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294454149|gb|EFG22523.1| isoleucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294456128|gb|EFG24492.1| isoleucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 944

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 23/172 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A A + K    +VL    V    DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFNSSLLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSD 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G+D +R  +        +      VK+ S+          Y + R+ FR      
Sbjct: 630 IIDVYGADVMRLWVSSADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            D + +   +      SEFD     L+        V   + +A    E + L
Sbjct: 681 DDFNPNT-DKVAYAAMSEFDK--WALLRL----EEVRQKVTDAYENYEFHML 725


>gi|291166072|gb|EFE28118.1| valine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 885

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 36/197 (18%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P    K +  +   G  +      KG   +I     N TG +H+GH     + D L    
Sbjct: 14  PKEFEKKIYEMWEEGEYFKPQRGKKGEAFSIVLPPPNITGQLHMGHALDHTLQDILIRYK 73

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
              GY+   +      G    ++A  V    R +Q L     ++        +LKH    
Sbjct: 74  RMQGYDTLWQP-----GTDHASIATEVKVVERIRQTLGKTKEEIG----REEFLKH-AWA 123

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +++                           I + +K L    D          G    
Sbjct: 124 WKEEFGDR------------------------IVEQMKKLGDSCDWSRERFTMDEGCNEA 159

Query: 273 IRDIIDNLARQGYVYEG 289
           + +    L  +GY+Y G
Sbjct: 160 VLEFFVKLYEEGYIYRG 176



 Score = 37.6 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 13/143 (9%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-EL 434
             K ++      +  L RD    KMSK  G+ I    ++D  G+D++RFM+         
Sbjct: 506 YLKKEVPFKDVFIHGLVRDDQGRKMSKSLGNGIDPLEIIDHYGADALRFMLASSNTPGND 565

Query: 435 LDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQAKDIFPDLDF------DLFPRN 483
           + F   +V+          N   ++       + +    +++ P  +        L  + 
Sbjct: 566 MRFYMERVESARNFANKLWNASRFILMNLEEYQPVLTTREEVEPYFELGDKWIISLSNKV 625

Query: 484 VIPQESEFDTSELQLIV-HLAEY 505
                   D  EL L    + ++
Sbjct: 626 AKEVSDNLDKYELSLAADKIYDF 648


>gi|257882321|ref|ZP_05661974.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257817979|gb|EEV45307.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
          Length = 669

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 115/331 (34%), Gaps = 42/331 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I T A  +  + Q+ +  
Sbjct: 16  PSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIETKAEELGVKPQEYVDK 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIVKD-- 235
             +D+ +           +++      K    K    LL   +      E W  +  +  
Sbjct: 76  MAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYSVSDEEF 135

Query: 236 YSVQAMMKIIRDDL------KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
           ++   + ++ +DD       KA +      + E+ +          +++         + 
Sbjct: 136 FTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYADRLLEYYEEHPEFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 196 ESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDALSNYITA-LGYGSE 254

Query: 344 ---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
               +E+ +   + ++G +    + R   +      ++        +      L +DG  
Sbjct: 255 DESLFEKYWPADVQMVGKE----IVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG-- 308

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 309 -KMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 921

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 117/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D +       V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFNPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 677 RY------MLVKLNDLITKVKDAYE-------TYDFAAVYHAIHNFC 710


>gi|166031702|ref|ZP_02234531.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC
           27755]
 gi|166028679|gb|EDR47436.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC
           27755]
          Length = 884

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 52/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIEDKLYQKWCENKYFHAEVDRSKKPFTIVMPPPNITGKLHMGHALDNTMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L +   D  E             
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKDEGIDKKELGR--EKFLERTW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  ++Y   + +                         LK + +  D          G   
Sbjct: 119 QWKEEYGGTITSQ------------------------LKKMGVSCDWDRERFTMDEGCSE 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            +  +  NL ++G++Y G
Sbjct: 155 AVEKVFLNLHKKGFIYRG 172


>gi|39932177|sp|Q896M5|SYE_CLOTE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 488

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 114/308 (37%), Gaps = 48/308 (15%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIN 168
             G K+   F + +PTG MHVG+ R A+          GD L  +               
Sbjct: 1   MNGNKIRTRF-APSPTGYMHVGNLRTALYAYLIAKHENGDFLLRIEDT------------ 47

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D   Q+      ++   +    ++D     G   G Y++   K +  +Y+ +L++  E  
Sbjct: 48  DQERQVEGALDIIYNTLKMTGIHHDEGPDIGGPVGPYVQSERKHIYTEYAQKLIDKGEAY 107

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +      +  +  + ++R++ ++L   H        + +      ++ I+   + G  + 
Sbjct: 108 YC-----FCTKERLDMLRENSESLGRPH-------KYDKHCSHLSKEEIEENLKAGIPFV 155

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                P   TT   D    ++   ++ +    D  L+KSDG  TY   + A     +  G
Sbjct: 156 IRQNNPNKGTTYFEDEIFGKITVDNSELD---DMVLIKSDGFPTY---NFANVVDDHLMG 209

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++  V GS++     +   +  A      +       +          K+SKR GD  
Sbjct: 210 ITHV--VRGSEYLSSSPKYNRLYDAFGWDVPKYIHCPPIM-----KDSHSKLSKRNGDA- 261

Query: 409 TLRHVVDE 416
           + + ++++
Sbjct: 262 SFQDLLEK 269


>gi|260435463|ref|ZP_05789433.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413337|gb|EEX06633.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 914

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 56/200 (28%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+               +  +    G   ++     N TG +H+GH     + DT+ 
Sbjct: 7   TYDPAGTEARWQQAWEDQGAFHPDPKAPGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G  V                                  LP   +  + ++ + +
Sbjct: 67  RYQRLAGKNVLC--------------------------------LPGTDHASIAVQTILE 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   +      +   + +L    D+  ++  + I   L+ L    D          G   
Sbjct: 95  KQLKQEGKTRHDLGRDAFLERAWDWKAESGGR-IVGQLRRLGYSVDWKRQRFTLDEGLSE 153

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            +++    L  QG +Y G  
Sbjct: 154 AVKEAFVRLHEQGLIYRGEY 173



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 76/237 (32%), Gaps = 40/237 (16%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG+
Sbjct: 497 TGFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV---RDEQNRKMSKSAGN 545

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    ++D  G+D++RF ++        D      +++     V   +    +  +  R
Sbjct: 546 GIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKKDTSATVEASRNFANKLWNATR 605

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFY 524
            A                  Q  E D + LQL     L+   RV               Y
Sbjct: 606 FALMN--------LGSETPTQLGESDPAALQLADRWILSRLARVNRETAQRYS-----SY 652

Query: 525 --------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
                   LY+ A +     +    +         +   L   R+        ++  
Sbjct: 653 GLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVA-----KQVLAK 704


>gi|257899755|ref|ZP_05679408.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837667|gb|EEV62741.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 669

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 115/331 (34%), Gaps = 42/331 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I T A  +  + Q+ +  
Sbjct: 16  PSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIETKAEELGVKPQEYVDK 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIVKD-- 235
             +D+ +           +++      K    K    LL   +      E W  +  +  
Sbjct: 76  MAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYSVSDEEF 135

Query: 236 YSVQAMMKIIRDDL------KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
           ++   + ++ +DD       KA +      + E+ +          +++         + 
Sbjct: 136 FTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYADRLLEYYEEHPEFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 196 ESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDALSNYITA-LGYGSE 254

Query: 344 ---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
               +E+ +   + ++G +    + R   +      ++        +      L +DG  
Sbjct: 255 DESLFEKYWPADVQMVGKE----IVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG-- 308

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 309 -KMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|253579415|ref|ZP_04856685.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849513|gb|EES77473.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 652

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 111/364 (30%), Gaps = 53/364 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MEKQKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRQQGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ + N   ++         +  +     DK+        E++   I K   
Sbjct: 61  AEEAGITPKEFVDNVSGEIK-------RIWDLMNTSYDKFIRTTDEDHEKQVKKIFKK-- 111

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNL 280
           + A   I +   + +     + F +E     G                    +    D L
Sbjct: 112 MYAKGDIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPCVPAKEEAYFFKMSKYADKL 171

Query: 281 ARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                 +   + P   K            Q   + R    +   +  D      +  D  
Sbjct: 172 IDYINTHPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDAL 231

Query: 331 YTYFAADLAYFKCKYERG-FDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQIN 382
             Y    + Y         F+ +    ++++G D    + R   +      +S       
Sbjct: 232 TNYITG-IGYDCDGESTEQFNKLWPADLHLIGKD----IIRFHTIYWPIFLMSLDLPLPK 286

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
            +      L  DG   KMSK  G+ I    +VD  G D+VR+ +L            +  
Sbjct: 287 QVFGHPWLLQGDG---KMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWEL 343

Query: 442 VKEQ 445
           + E+
Sbjct: 344 MVER 347


>gi|153823935|ref|ZP_01976602.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518546|gb|EAZ75769.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 877

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|111022628|ref|YP_705600.1| methionyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110822158|gb|ABG97442.1| methionine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 519

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 101/327 (30%), Gaps = 38/327 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
           P G  H+GH    +  D LA      G++V      ++ G ++   A         +  R
Sbjct: 22  PNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTAAKEGIDVRELAAR 81

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKY-SSELLNFPE------EKWLPIVKDYS 237
                   D  L   +   +       E A K     +L+  +        W  +  +  
Sbjct: 82  NSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWRRMLDNGDIYLDTYSGWYSVRDEAF 141

Query: 238 VQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  ++DD   L+ +    +  +E+  +    S  +D +  L  +       + P  
Sbjct: 142 YTEAETTLQDDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLRLYEEN---PDFIAPAT 198

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPL---------LKSDGSYTYFAADLAYFKCKYE 346
            +      +         +    D   P+         +  D    Y     A +     
Sbjct: 199 RRNEIVSFVKGGLKDLSISRTTFDWGVPVPDHPEHVMYVWVDALTNYLTG--AGYPDTDS 256

Query: 347 RGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             F       ++++G D    + R   V        A I +     V  +      KMSK
Sbjct: 257 EQFGKFWPANLHIIGKD----ITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGEKMSK 312

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +    +V++ G D+VRF +L  
Sbjct: 313 SVGNVVDPVAMVEQYGLDAVRFFLLRE 339


>gi|332557421|ref|ZP_08411743.1| valyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275133|gb|EGJ20448.1| valyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 987

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 61/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     ++  +   +G         +     I     N TG +H+GH     + D L   
Sbjct: 9   AAEAEARLYDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG     +                               V +EL
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQMV-------------------------------VEREL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A   +        E +L  V ++  Q+    I + LK L    D   +           +
Sbjct: 98  ARAGNPGRREMGREAFLEKVWEWKEQSG-GTIVNQLKRLGASCDWSRNAFTMDPNFQRAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G++Y G          +    D +
Sbjct: 157 LKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLE 190



 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +     V +  LV   RD    KMSK  G+
Sbjct: 593 TGFD-IIFFW-------VARMMMMQLAVVNEVPFKTVYVHALV---RDEKGKKMSKSLGN 641

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 642 VLDPLELIDEFGADAVRFTL 661


>gi|332519259|ref|ZP_08395726.1| isoleucyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045107|gb|EGI81300.1| isoleucyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 1134

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   V +  A  NV+   LV    D    KMSKR G+       +D
Sbjct: 642 GVDQTRGWFYTLHAIGTMVFDSVAYKNVVSNGLV---LDKNGQKMSKRLGNATDPFETLD 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G+D+ R+ M+   N  + L FD   ++E + K     Y  Y++    +   +      
Sbjct: 699 TYGADATRWYMIANANPWDNLKFDLDGIEEVKRKFFGTLYNTYSFFSLYTNIDKFSYAED 758

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           D+  +  P       SE  T    LI  + EY           EP
Sbjct: 759 DIALNERPELDRWILSELHT----LIQKVDEY-------YAEYEP 792


>gi|331701832|ref|YP_004398791.1| glutamyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129175|gb|AEB73728.1| glutamyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 497

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 92/298 (30%), Gaps = 36/298 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R    +   +Q++ L     
Sbjct: 11  APSPTGHLHIGNARTAIFNYLFARHNKGKFIIRIEDTDTKR-NVADGEKSQLDNL----K 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G Y     K +   L  +   E             + Y  +  +
Sbjct: 66  WLGLDWDEGPDVGGDYGPYRQSERKDIYTPLIQQLIDEG---------KAYESYRTEEQL 116

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              RD  KA     ++   E ++           I +   +G         PK+      
Sbjct: 117 TADRDAQKARG---EMPHYEYEYEGMTEDQKAQAIADAKAKGLKPVIRFRVPKNHEYAWD 173

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHS 361
           D+ + ++ F S  +G D    + K DG  TY  A +      K    F       G DH 
Sbjct: 174 DIVKGKVSFNSDTIGGDF--VIRKRDGMPTYNFAVVCDDHLMKISHVFR------GDDHV 225

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +   +  A   +  +       +  +       K+SKR    +       ++G 
Sbjct: 226 ANTPKQLMIYEAFGWQAPRFGH----MSLIISADTGKKLSKRDESVLQFIEQYRKLGY 279


>gi|310778153|ref|YP_003966486.1| glutamyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747476|gb|ADO82138.1| glutamyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 503

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 75/444 (16%), Positives = 134/444 (30%), Gaps = 53/444 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG  HVG     +     A     +G +        D G         +F   + 
Sbjct: 9   IAPSPTGDPHVGTAYIGLFNLAFA---KKNGGDFILRIEDTDQGRSTRESEKMIFETLKW 65

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              N      EG   G Y +     L   Y+ +L+   E  +        +  + +  + 
Sbjct: 66  LDINYSEGPDEGGEYGPYRQSERFHLYGDYARQLVEKGE-AYYCFCTRDRLDKLRERQKA 124

Query: 248 DLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             KA     H   +SED+            I      G  Y   L  P   TT   D  R
Sbjct: 125 MGKAPGYDGHCRSLSEDE------------IKAKLEAGDEYVIRLKMPYEGTTVIKDRLR 172

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             ++F +  +    D+ LLK DG  TY    LA     Y     ++I     +      +
Sbjct: 173 GDVVFENDKID---DQILLKGDGFPTYH---LANVVDDYLMQITHVIR--AEEWIASTPK 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR---------AGDFITLRHVVDEV 417
              +  A   +  +   +      L R+    K+SKR                  +++ +
Sbjct: 225 HIQLYKAFGWETPEFIHM-----PLLRNSDRTKISKRKNPVSLNWYKEQGYLKEGLINFL 279

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLD 476
           G     F       +     D   +   S   PVF  V+  +   + +  +  D   +L 
Sbjct: 280 GLMGYSFPDNREIFTIDEFMDNFDINHVSLGGPVFDLVKLGWVNNQHMRMKDLDELTELA 339

Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
              F       E+     E + +         I              +L +LA     ++
Sbjct: 340 IPFFKDQNYIGEN-VSEKEYKTVKR-------IVEILREG-----THFLKELAEGAAIYY 386

Query: 537 SHGRENPRLRFVQANNRKLTMMRL 560
           +   E P +        + ++ R+
Sbjct: 387 NDDYELPVVNEDMNKKERKSIERM 410


>gi|308801771|ref|XP_003078199.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116056650|emb|CAL52939.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1076

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 58/212 (27%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +             +   +     K  I     N TG +H+GH     + DT+   
Sbjct: 113 NPQAVEAAWYEWWEKCGMFTPKMGTNKPKFVIVIPPPNVTGALHIGHALTNAIQDTIVRW 172

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGYE       + AG    T+                               V K+L
Sbjct: 173 RRMSGYEALWVPGTDHAGIATQTV-------------------------------VEKKL 201

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++      KI    L+ +    D               +
Sbjct: 202 QREEGVTRHDLGREKFLERVFEWKDVYGGKICNQ-LRRIGSSMDWSREAFTMDEKLSKAV 260

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++    +  +G +Y        S   +    D
Sbjct: 261 KEAFVRMHDEGLIYRDNRLVNWSCQLKTAISD 292



 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 73/212 (34%), Gaps = 29/212 (13%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +WL  ++D+ +   +         +   +  F  E+D   G P    + +D       + 
Sbjct: 516 RWLENIRDWCISRQLWWG----HRIPAFYVRFSGENDTDSGMPGGSSEQLDRWVIGRDMA 571

Query: 288 EGILPPPKS----KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YF 341
           E      K     + T + D D     F S +    V          +     DLA  Y 
Sbjct: 572 EARTVAEKKYPGKEFTLEQDEDVLDTWFSSGLFPFSV--------FGWPDETPDLAEFYP 623

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
               E G D +++         V R+  +   ++ K     V L  +V   RD    KMS
Sbjct: 624 TSLLETGHD-ILFFW-------VARMVMMGMKLTGKVPFKQVYLHAMV---RDAHGRKMS 672

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           K  G+ I   HV++ +   ++   +L     E
Sbjct: 673 KSLGNVIDPLHVIEGIDLAALNATLLGGNLDE 704


>gi|257462531|ref|ZP_05626942.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060185|ref|ZP_07924670.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685861|gb|EFS22696.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 473

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 107/329 (32%), Gaps = 46/329 (13%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             K  +V++          +H+G+ R A+V DT+     + GY+V               
Sbjct: 17  PRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYQV--------------- 61

Query: 177 LALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIV 233
                  +Y Q   + +D  +      G  ++ +     + Y  ++  L+  EE  L   
Sbjct: 62  -------KYVQNFTDVDDKMIKRANEEGSTVEEIAHRYIEAYLEDMKCLHIKEEGMLRPK 114

Query: 234 KDYSVQAMMKIIR---DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
               +Q M+ +I+   D   A     D++     +H    +  +  I++L        G 
Sbjct: 115 ATEHIQEMIDMIQSLIDKGHAYEANGDVYFRVSTYHEEYGALSKQKIEDLQS------GA 168

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                       D     L   S       D P  K    +     + +    KY   F 
Sbjct: 169 RIEVTELKESPLDF---ALWKASKPGEPHWDSPWGKGRPGWH---IECSAMSNKY---FG 219

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           N   + G          E  +A +                 +  DG  +KMSK  G+F+ 
Sbjct: 220 NSFDIHGGGQDLIFPHHENEIAQSKCSCGGSFAKYWMHNGYINIDG--VKMSKSLGNFVL 277

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           LR ++       +RF ML     + ++F 
Sbjct: 278 LRDILKHFSGKVIRFFMLSAHYRKPMNFS 306


>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 921

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 110/326 (33%), Gaps = 62/326 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  S  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRSDLLDAIKETKWVPEWGEQRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                   +  + EG   P     T   + D   + F 
Sbjct: 470 GEPIITDETIEHVSELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVA 371
           S   G      L + D        DL        R  D  +Y+ GSD   G+     + A
Sbjct: 530 S---GSSHQAVLEERD--------DLV-------RPAD--LYLEGSDQYRGWFNSSLSTA 569

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            AV+ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +     
Sbjct: 570 VAVTGKAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSVDY 626

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +      +K+ ++          Y + R+ FR       D D      N +  E   
Sbjct: 627 QADVRVSDAILKQVAE---------VYRKIRNTFRFLHGNLFDFD---PKTNAVAVEDLR 674

Query: 492 DTSELQLIVHLAEYPRVIENATIAQE 517
           +  +  LI  L +    ++ A    E
Sbjct: 675 EVDQYMLIK-LNKLIDKVKKAYDEYE 699


>gi|261393180|emb|CAX50798.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase; IleRS)
           [Neisseria meningitidis 8013]
          Length = 929

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 93/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      K +     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKGELLSAEDCEHYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARRLQE 700


>gi|261208239|ref|ZP_05922912.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565960|ref|ZP_06446399.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293573149|ref|ZP_06684086.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
 gi|294615978|ref|ZP_06695805.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617639|ref|ZP_06697267.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260077496|gb|EEW65214.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162244|gb|EFD10105.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591164|gb|EFF22846.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596103|gb|EFF27368.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291606787|gb|EFF36172.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 669

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 115/331 (34%), Gaps = 42/331 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I T A  +  + Q+ +  
Sbjct: 16  PSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIETKAEELGVKPQEYVDK 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIVKD-- 235
             +D+ +           +++      K    K    LL   +      E W  +  +  
Sbjct: 76  MAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYSVSDEEF 135

Query: 236 YSVQAMMKIIRDDL------KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
           ++   + ++ +DD       KA +      + E+ +          +++         + 
Sbjct: 136 FTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYADRLLEYYEEHPEFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 196 ESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDALSNYITA-LGYGSE 254

Query: 344 ---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
               +E+ +   + ++G +    + R   +      ++        +      L +DG  
Sbjct: 255 DESLFEKYWPADVQMVGKE----IVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG-- 308

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 309 -KMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|170290560|ref|YP_001737376.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174640|gb|ACB07693.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 472

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 112/349 (32%), Gaps = 57/349 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  DTLA  +   GY +     I D   +I   A       ++     +   
Sbjct: 42  HLGHARTYVFYDTLARFLRKLGYSLFYLQNITDVDDKIVNRA------AEEGRDPVELAR 95

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y    ++ +     + Y+                       +K I + ++ L    
Sbjct: 96  EFESYYYEDMRALNITSVNLYARASD------------------YLKEIFEQVETLIKLG 137

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             +++E   +    +      D     G   E +          K +     L       
Sbjct: 138 KAYVTESGVYFDITTFP----DYGKLSGQRPEELRVHRIEPDPTKRNPGDFALWRNRPRE 193

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG-------YVKRLEA 369
               + P     G   +   D A     + + +D         H G       + +   A
Sbjct: 194 EFGWESPWGY--GRPGWHIEDTAISIKHFGKQYDI--------HGGAIELAFPHHEAEIA 243

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            A + + +K  +   +   + L  +G   KMSK  G+F+T+R  + E  ++++R  +L R
Sbjct: 244 QAESFTGEKPFVKYWIHTGL-LTVEGE--KMSKSLGNFVTIREALREYDANTLRIFLLSR 300

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
                +DF +  +++            +Y R  +     K++    + D
Sbjct: 301 HYRSPIDFRWEYLEQARS---------SYERIINCLENLKELEIGEEGD 340


>gi|33303703|gb|AAP22259.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 410

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 109/343 (31%), Gaps = 76/343 (22%)

Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197
           +GH    V GD +A      GY V      ++ G +I   A  +                
Sbjct: 1   IGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEEL---------------- 44

Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
               P  Y+ ++   + + +    +++ +  ++   +D     + KI +  +   +I  D
Sbjct: 45  -NVTPQAYVDNIVAGIKELWEKMDISYDD--FIRTTEDRHKDVVEKIFKQLVDQGDIYLD 101

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            +                ++D +     V   +             +  +   FR   +G
Sbjct: 102 EYEGWYSVQDETFYTEHQLVDPIMEGDKV---VGGKSPDSGHDVELVREESYFFR---MG 155

Query: 318 DDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------FDNMIY 354
             VDR L   + +  +                    DLA  +  ++ G        ++IY
Sbjct: 156 KYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIY 215

Query: 355 VM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V              G+++   Y K   A    V ++  + + +   ++ +  D      
Sbjct: 216 VWVDALSNYITALGYGTENEQMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKK 275

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 276 VFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 318


>gi|260441266|ref|ZP_05795082.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291044613|ref|ZP_06570322.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011507|gb|EFE03503.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 929

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      +++M++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPPWGRARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQRIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|269797242|ref|YP_003311142.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269093871|gb|ACZ23862.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 944

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 23/172 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A A + K    +VL    V    DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFNSSLLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSD 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G+D +R  +        +      VK+ S+          Y + R+ FR      
Sbjct: 630 IIDVYGADVMRLWVSSADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            D + +   +      SEFD     L+        V   + +A    E + L
Sbjct: 681 DDFNPNT-DKVAYADMSEFDK--WALLRL----EEVRQKVTDAYENYEFHML 725


>gi|26554387|ref|NP_758321.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26454397|dbj|BAC44725.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 1087

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 65/486 (13%), Positives = 150/486 (30%), Gaps = 75/486 (15%)

Query: 127  FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
            + S NP    H+GH    ++ D L       GYE      +++ G +I   A  +  + Q
Sbjct: 579  YPSGNP----HIGHAFTTLIADVLTRYKKKLGYETFFITGMDEHGQKIEEKAKELNLKPQ 634

Query: 187  QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            + +                +     +L     S  +    E    +V++       ++++
Sbjct: 635  ELVD-----------KYAKVFDNLWKLLGIEYSHFIRTTAEYHKNVVQET----FSELLK 679

Query: 247  DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS--------KT 298
             D   L +   ++    + +      +R   D+      ++  I    +S        K 
Sbjct: 680  KDFIYLGVWKGLYCVSCEENYTKNIAVRKENDDKLYCAQLHPLIQKEEESYFLKIKQFKK 739

Query: 299  TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-- 356
                 +    L++  T + +  +  L   D      +     +  + +    +++YV   
Sbjct: 740  YISSFLKDPNLVYPITRINELFNSFLNNDDFDDLSISRSNFSWGIQIKENPKHVVYVWLD 799

Query: 357  ---------GSDHSGY--VKRLE-----AVAAAVSEKKAQINVLLCELVRLYRDGMP--- 397
                     G         ++        +   +S++  + + +   ++           
Sbjct: 800  ALLNYLSGLGYRQKDDSNFQKFWNSQDAEIVQLMSKEITRFHCIYWPIMLEMLGLRKPTK 859

Query: 398  -----------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQ 445
                        KMSK  G+ +   + ++  G D+ R+ +L      E   F    +   
Sbjct: 860  YISHGWIITEQGKMSKSLGNVLDPIYFINTYGRDAFRYYLLKELSLKEDSVFSEKLLINT 919

Query: 446  SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
              ++    V   + R   +  + +D        + P+   P+ S     E      L ++
Sbjct: 920  FNKDLANNVGNLFNRSIGMINKYRD-------GIIPKYSKPKLSFNIEFE----KQLKQF 968

Query: 506  PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV-H 564
               I          K+   + DL +  +      +     +    NN K     L L+ +
Sbjct: 969  DDEITTIIEKLNIQKILSRVIDLINECNFFIEQVKPWDLKK---ENNEKDLDCFLSLILN 1025

Query: 565  AVASII 570
            AV  +I
Sbjct: 1026 AVKRVI 1031


>gi|33866926|ref|NP_898485.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81573695|sp|Q7U3N4|SYV_SYNPX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33639527|emb|CAE08911.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 914

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 110/373 (29%), Gaps = 56/373 (15%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFHRGDPS 271
           +    +   F  E+W  + +D+        I   L     +     I  +   +    P 
Sbjct: 373 EALEKQDPRFIPERWEKVYRDWLTDIRDWCISRQLWWGHRIPAWFVISETGGKYTDTTPY 432

Query: 272 PI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            + R+ ++ L +    Y       + +             F +    D     L +   +
Sbjct: 433 VVARNEVEALEKAKAKYGAAAVIEQDEDVLDTWFSSGLWPFSTLGWPDAESADLQRWYPT 492

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            T               GFD +I+         V R+  +A A + +    +V +  LV 
Sbjct: 493 STLVT------------GFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV- 531

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RD    KMSK AG+ I    ++D  G+D++RF ++        D      ++      
Sbjct: 532 --RDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKTDTSAT 589

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRV 508
           V   +    +  +  R A     D            Q  + D + LQL     L+   RV
Sbjct: 590 VEASRNFANKLWNATRFALMNLGD--------ETPAQLGDPDPAALQLADRWILSRLARV 641

Query: 509 IENATIAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                          Y        LY+ A +     +    +         +   L   R
Sbjct: 642 NRETAERYS-----NYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQR 696

Query: 560 LQLVHAVASIINS 572
           +        ++  
Sbjct: 697 VA-----KQVLAK 704



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 49/193 (25%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   ++     N TG +H+GH     + DT+      +G
Sbjct: 14  EARWQQAWEDQGAFHPDPKAPGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                      +  L    +D        +  K + +E   ++ 
Sbjct: 74  ---------------------------KNVLCLPGTDHASIAVQTILEKQLKQEGKTRHH 106

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    +          I   L+ L    D          G    +++   
Sbjct: 107 LGRDGFLERAWQWKAESGGR------IVGQLRRLGYSVDWQRQRFTLDEGLSEAVKEAFV 160

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 161 RLHEQGLIYRGEY 173


>gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 921

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 110/326 (33%), Gaps = 62/326 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  S  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRSDLLDAIKETKWVPEWGEQRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                   +  + EG   P     T   + D   + F 
Sbjct: 470 GEPIITDETIEHVSELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVA 371
           S   G      L + D        DL        R  D  +Y+ GSD   G+     + A
Sbjct: 530 S---GSSHQAVLEERD--------DLV-------RPAD--LYLEGSDQYRGWFNSSLSTA 569

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            AV+ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +     
Sbjct: 570 VAVTGKAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSVDY 626

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +      +K+ ++          Y + R+ FR       D D      N +  E   
Sbjct: 627 QADVRVSDAILKQVAE---------VYRKIRNTFRFLHGNLFDFD---PKTNAVAVEDLR 674

Query: 492 DTSELQLIVHLAEYPRVIENATIAQE 517
           +  +  LI  L +    ++ A    E
Sbjct: 675 EVDQYMLIK-LNKLIDKVKKAYDEYE 699


>gi|288817614|ref|YP_003431961.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787013|dbj|BAI68760.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751212|gb|ADO44695.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 1008

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +    S   +    Y      +  K ++     N TG +H+GH   A + D +   
Sbjct: 8   DHKAVESKHSRRWIESAIYSSGSDQREEKFSVVIPPPNVTGSLHMGHALNATLQDMVCRW 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G +V             +   ++  +   + L                        
Sbjct: 68  QRMMGKKVV-------WVPGFDHAGIATQYVVDKKLQ----------------------- 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   + L    E++L  V  +   +    IR+ L+ L +  D          G    +
Sbjct: 98  --QEGKDRLEVGREEFLKEVWKWVPIS-RGAIREQLEKLGVSVDWKRERFTLDEGFSRAV 154

Query: 274 RDIIDNLARQGYVYEGIL 291
           R     L   G +Y G  
Sbjct: 155 RYAFRKLYEDGLIYRGEY 172



 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +    +     ++V +  LV   RD    K
Sbjct: 587 YPTDLLVTGFD-IIFFW-------VARMIMMGTYFTGDVPFVDVYIHALV---RDEKGQK 635

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMM 426
           MSK  G+ I    +V+  G+D++RF +
Sbjct: 636 MSKTKGNVIDPLDIVERYGADALRFTL 662


>gi|110004402|emb|CAK98740.1| probable valyl-trna synthetase protein [Spiroplasma citri]
          Length = 888

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 61/187 (32%), Gaps = 32/187 (17%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                    +  ++  K    +I     N TG +H+GH     + D +       G++  
Sbjct: 19  YQFWKKKGYFTADVKSKQPSFSIVIPPPNVTGKLHLGHAWDTTLQDLIIRYKKLLGFD-- 76

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
             Y        ++   ++   + ++ L    + L        +++ V     ++Y+    
Sbjct: 77  TLYLPG-----MDHAGIATQAKVEERLCVTKNILRHDLGREKFIEQV-WAWKEEYA---- 126

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                               +IIR+    L +  D    +   +    + ++ +  +L +
Sbjct: 127 --------------------EIIREQWAKLGLALDYSREQFTLNNNLSAAVQKVFIDLYQ 166

Query: 283 QGYVYEG 289
           +G +Y G
Sbjct: 167 KGLIYRG 173



 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 24/172 (13%)

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIK 399
           K  ++  F   + V G D   +      +  ++   K +   +VL+  L+   RD    K
Sbjct: 469 KKLFQHYFPTNVLVTGYD-IIFFWVSRMMFESLEFTKEKPFNDVLIHGLI---RDEEGRK 524

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVFY 453
           MSK  G+ +    V+ E G+D++R+ ++      + L F   KV           N   Y
Sbjct: 525 MSKSLGNGVDPMDVIKEYGADTLRYFLVTNSAPGQDLRFSLEKVNSAWNFINKLWNAARY 584

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL---QLIVHL 502
           V+              +  P ++F++  +N++    E    +    +L   +
Sbjct: 585 VEMNLT---------NNFKPLVNFEIEIKNLLLNHQENAIDQWILSELAKTI 627


>gi|91202284|emb|CAJ75344.1| strongly similar to valyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 922

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 52/205 (25%), Gaps = 47/205 (22%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  +             +            I     N TG +HVGH    ++ D L   
Sbjct: 38  SPKEVEYKWYRFWEESGFFHSEPSSSKKPYTIVIPPPNVTGVLHVGHALNNIIQDILIRW 97

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+                     V W                  PG     +  + 
Sbjct: 98  KRMQGFN--------------------VLWM-----------------PGTDHAGIATQN 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKI-------IRDDLKALNIQHDIFISEDDFH 266
             +      N    K   I ++  ++ + K        I   LK L    D         
Sbjct: 121 VVERELSSKNI---KRQDIGRERFIEEVWKWKQQYGSTIIQQLKKLGSSCDWQRERFTMD 177

Query: 267 RGDPSPIRDIIDNLARQGYVYEGIL 291
            G    +++    L R+G +Y+G  
Sbjct: 178 EGLSDAVKETFVRLYRKGLIYKGKY 202


>gi|28210684|ref|NP_781628.1| glutamyl-tRNA synthetase [Clostridium tetani E88]
 gi|28203122|gb|AAO35565.1| glutamyl-tRNA synthetase [Clostridium tetani E88]
          Length = 522

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 115/314 (36%), Gaps = 48/314 (15%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVT 162
           Y       G K+   F + +PTG MHVG+ R A+          GD L  +         
Sbjct: 29  YKELNFMNGNKIRTRF-APSPTGYMHVGNLRTALYAYLIAKHENGDFLLRIEDT------ 81

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
                 D   Q+      ++   +    ++D     G   G Y++   K +  +Y+ +L+
Sbjct: 82  ------DQERQVEGALDIIYNTLKMTGIHHDEGPDIGGPVGPYVQSERKHIYTEYAQKLI 135

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +  E  +      +  +  + ++R++ ++L   H        + +      ++ I+   +
Sbjct: 136 DKGEAYYC-----FCTKERLDMLRENSESLGRPH-------KYDKHCSHLSKEEIEENLK 183

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G  +      P   TT   D    ++   ++ +    D  L+KSDG  TY   + A   
Sbjct: 184 AGIPFVIRQNNPNKGTTYFEDEIFGKITVDNSELD---DMVLIKSDGFPTY---NFANVV 237

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +  G  ++  V GS++     +   +  A      +       +          K+SK
Sbjct: 238 DDHLMGITHV--VRGSEYLSSSPKYNRLYDAFGWDVPKYIHCPPIM-----KDSHSKLSK 290

Query: 403 RAGDFITLRHVVDE 416
           R GD  + + ++++
Sbjct: 291 RNGDA-SFQDLLEK 303


>gi|15923518|ref|NP_371052.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926205|ref|NP_373738.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21282212|ref|NP_645300.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485392|ref|YP_042613.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|87161223|ref|YP_493216.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194290|ref|YP_499082.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148266987|ref|YP_001245930.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393034|ref|YP_001315709.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978856|ref|YP_001441115.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161508767|ref|YP_001574426.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141036|ref|ZP_03565529.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315637|ref|ZP_04838850.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731132|ref|ZP_04865297.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253732535|ref|ZP_04866700.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005321|ref|ZP_05143922.2| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795374|ref|ZP_05644353.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258408939|ref|ZP_05681220.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420424|ref|ZP_05683367.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258439344|ref|ZP_05690276.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444084|ref|ZP_05692421.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446352|ref|ZP_05694510.1| glutamyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448445|ref|ZP_05696560.1| glutamyl-tRNA synthetase/glutamate-tRNA(Gln) ligase [Staphylococcus
           aureus A6224]
 gi|258452740|ref|ZP_05700738.1| glutamyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453801|ref|ZP_05701775.1| glutamyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049570|ref|ZP_06022439.1| glutamyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052416|ref|ZP_06024616.1| glutamyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202150|ref|YP_003281419.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282894961|ref|ZP_06303184.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282924441|ref|ZP_06332113.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282928864|ref|ZP_06336455.1| glutamyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284023537|ref|ZP_06377935.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850303|ref|ZP_06791037.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406904|ref|ZP_06816707.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275773|ref|ZP_06858280.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246272|ref|ZP_06930121.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039656|sp|P67022|SYE_STAAW RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|54039658|sp|P99170|SYE_STAAN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|54042027|sp|P67021|SYE_STAAM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|56749396|sp|Q6GBW0|SYE_STAAS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|118595557|sp|Q2FJB2|SYE_STAA3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|123291868|sp|Q2G241|SYE_STAA8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|166226857|sp|A7WYU4|SYE_STAA1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|189082170|sp|A6TZ04|SYE_STAA2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|189082171|sp|A5IQ81|SYE_STAA9 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|189082172|sp|A8YZM5|SYE_STAAT RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|13700418|dbj|BAB41716.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246296|dbj|BAB56690.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21203648|dbj|BAB94348.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243835|emb|CAG42260.1| putative glutamyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87127197|gb|ABD21711.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201848|gb|ABD29658.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740056|gb|ABQ48354.1| glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149945486|gb|ABR51422.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720991|dbj|BAF77408.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160367576|gb|ABX28547.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253725097|gb|EES93826.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253729464|gb|EES98193.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789346|gb|EEV27686.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840290|gb|EEV64753.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843614|gb|EEV68020.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257847681|gb|EEV71680.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850754|gb|EEV74699.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854946|gb|EEV77891.1| glutamyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858314|gb|EEV81201.1| glutamyl-tRNA synthetase/glutamate-tRNA(Gln) ligase [Staphylococcus
           aureus A6224]
 gi|257859613|gb|EEV82463.1| glutamyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864057|gb|EEV86811.1| glutamyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259159662|gb|EEW44706.1| glutamyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162310|gb|EEW46883.1| glutamyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262074440|gb|ACY10413.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269940100|emb|CBI48476.1| putative glutamyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282589472|gb|EFB94561.1| glutamyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282592852|gb|EFB97856.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282762643|gb|EFC02780.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816227|gb|ADC36714.1| Glutamyl-tRNA synthetase; Glutamyl-tRNA(Gln) synthetase
           [Staphylococcus aureus 04-02981]
 gi|294822815|gb|EFG39250.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968135|gb|EFG44161.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176870|gb|EFH36128.1| glutamyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|302750419|gb|ADL64596.1| putative glutamyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|312829023|emb|CBX33865.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315128820|gb|EFT84819.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315196661|gb|EFU27008.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141764|gb|EFW33592.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313248|gb|AEB87661.1| Glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727916|gb|EGG64365.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329731018|gb|EGG67391.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731959|gb|EGG68315.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 484

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMQISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|303230916|ref|ZP_07317660.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514429|gb|EFL56427.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 944

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 23/172 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A A + K    +VL    V    DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFNSSLLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSD 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G+D +R  +        +      VK+ S+          Y + R+ FR      
Sbjct: 630 IIDVYGADVMRLWVSSADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            D + +   +      SEFD     L+        V   + +A    E + L
Sbjct: 681 DDFNPNT-DKVAYADMSEFDK--WALLRL----EEVRQKVTDAYENYEFHML 725


>gi|69248667|ref|ZP_00604797.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Enterococcus faecium DO]
 gi|227552442|ref|ZP_03982491.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257880089|ref|ZP_05659742.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257885518|ref|ZP_05665171.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257888319|ref|ZP_05667972.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257891180|ref|ZP_05670833.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893993|ref|ZP_05673646.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257896791|ref|ZP_05676444.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|260560302|ref|ZP_05832478.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293378577|ref|ZP_06624740.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293557282|ref|ZP_06675829.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293563094|ref|ZP_06677560.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293567520|ref|ZP_06678865.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294623374|ref|ZP_06702233.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940236|ref|ZP_07847409.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314941705|ref|ZP_07848584.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947651|ref|ZP_07851060.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314950637|ref|ZP_07853717.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992496|ref|ZP_07857917.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996350|ref|ZP_07861403.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194356|gb|EAN08866.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Enterococcus faecium DO]
 gi|227178417|gb|EEI59389.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257814317|gb|EEV43075.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257821374|gb|EEV48504.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257824373|gb|EEV51305.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257827540|gb|EEV54166.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830372|gb|EEV56979.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257833356|gb|EEV59777.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|260073647|gb|EEW61973.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291589763|gb|EFF21566.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291597221|gb|EFF28413.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291600569|gb|EFF30874.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605008|gb|EFF34476.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|292642906|gb|EFF61053.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|313589493|gb|EFR68338.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592956|gb|EFR71801.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313597184|gb|EFR76029.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599477|gb|EFR78320.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640556|gb|EFS05136.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645892|gb|EFS10472.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 669

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 115/331 (34%), Gaps = 42/331 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I T A  +  + Q+ +  
Sbjct: 16  PSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIETKAEELGVKPQEYVDK 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIVKD-- 235
             +D+ +           +++      K    K    LL   +      E W  +  +  
Sbjct: 76  MAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYSVSDEEF 135

Query: 236 YSVQAMMKIIRDDL------KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
           ++   + ++ +DD       KA +      + E+ +          +++         + 
Sbjct: 136 FTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYADRLLEYYEEHPEFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 196 ESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDALSNYITA-LGYGSE 254

Query: 344 ---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
               +E+ +   + ++G +    + R   +      ++        +      L +DG  
Sbjct: 255 DESLFEKYWPADVQMVGKE----IVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG-- 308

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 309 -KMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|222529340|ref|YP_002573222.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782359|sp|B9MRZ5|SYI_ANATD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222456187|gb|ACM60449.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 920

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 25/182 (13%)

Query: 354 YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     A A   +     VL    V    DG   KMSK  G+ I+   
Sbjct: 558 YLEGNDQYRGWFQSSLLTAVATKGRAPYRIVLTHGFVV---DGEGKKMSKSEGNVISPFD 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++E G+D +R   +    +  +      +K+ ++          Y + R+  R      
Sbjct: 615 IINEFGADILRLWCVSADYTTDMRISKDIIKQLTEI---------YRKIRNTARFLLGNL 665

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS 530
            D +      + +  E+  +  +  L   L +    +  A           Y  +Y L  
Sbjct: 666 YDFN---PKTDKVGYENLKEIDKWAL-QRLYKLIEKVTKAYEEY------DYNQVYHLVH 715

Query: 531 VF 532
            F
Sbjct: 716 NF 717


>gi|317061403|ref|ZP_07925888.1| glutamyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687079|gb|EFS23914.1| glutamyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 431

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 95/286 (33%), Gaps = 46/286 (16%)

Query: 128 VSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           ++ +PTG  HVG    A+          GD +  +      E T +    D   Q+  + 
Sbjct: 32  IAPSPTGDPHVGTAYIALFNLAFANHNGGDFILRI------EDTDQNRYTDGSEQM--IF 83

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            ++ W     +   D     G   G Y +    +L  KY+ EL+      +        +
Sbjct: 84  DALHWLGLDYVEGPDV----GGDYGSYRQSERFDLYVKYAKELVEKGG-AYYCFCTSERL 138

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             + +  +   KA                   S  ++ I+     G  Y   L  P    
Sbjct: 139 DHLRERQKAMGKAPGYDGHC-----------RSLTKEEIEEKLAAGEPYVIRLKMPYEGE 187

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  R  ++F +  +    D+ LLK+DG  TY    LA     +  G  ++I     
Sbjct: 188 TVIHDRLRGDIVFENNKID---DQVLLKADGFPTYH---LANVVDDHLMGITHVIR--AE 239

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 240 EWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNSDRTKISKRK 280


>gi|281412869|ref|YP_003346948.1| glutamyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373972|gb|ADA67534.1| glutamyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 469

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 101/286 (35%), Gaps = 45/286 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  +  +         REY           L  
Sbjct: 7   APSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLERSEREY--------EEKLME 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W     L++   D+  G   G Y +    E+  +++  L+           K Y V 
Sbjct: 59  SLKW--LGLLWDEGPDV--GGDHGPYRQSERVEIYREHAERLVKEG--------KAYYVY 106

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  + I +  + L  +        +      +P R        +G     +      K  
Sbjct: 107 AYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPERR--REYEEKGL-RPAVFFKMPRKGY 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ + +++F++  +GD     +++S+G  TY   + A           ++I   G D
Sbjct: 164 VLNDVVKGEVVFKTGAIGDF---VIMRSNGLPTY---NFACVVDDMLMEITHVIR--GDD 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+    S +KA         + L  DG   K+SKR G
Sbjct: 216 HLSNTLRQLALYE--SFEKAPPVFAHVSTI-LGPDGK--KLSKRHG 256


>gi|34762740|ref|ZP_00143729.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887590|gb|EAA24670.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 887

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 85/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEDGLKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L R G +Y+G            +    + D + K            + D  ++ 
Sbjct: 156 RKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKNSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      ++  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTVLEQGLRLL 691


>gi|323138170|ref|ZP_08073243.1| glutamyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396632|gb|EFX99160.1| glutamyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 472

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 93/303 (30%), Gaps = 50/303 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A                         + L + 
Sbjct: 3   QVVTRFAPSPTGFLHIGGARTALFNWLYAR-------------------RHGGRMMLRIE 43

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              ++       D        + L   G  +     +       E+ L   K Y   A  
Sbjct: 44  DTDRERSTQAAIDAIIDGMKWLGLDWDGDIVYQYSRAARHREVAEELLARGKAYRCYASA 103

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + + +  +    +      +  +   DPS            G      L  P    T   
Sbjct: 104 QELEEMREKARAEKRPPRYDGRWRDRDPSQAPA--------GVAPVIRLKSPLDGETVIE 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  + +++F +  + D     LL+SDG+ TY    LA     ++ G   +I   G DH  
Sbjct: 156 DAVQGRVVFPNKDIDDF---VLLRSDGNPTYM---LAVVVDDHDMGVTQIIR--GDDHLT 207

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
              R + +  A+  +           + L       K+SKR G           +G D+ 
Sbjct: 208 NAARQKHIYEAMGWETPAFAH-----IPLIHGPDGAKLSKRHG----------ALGVDAY 252

Query: 423 RFM 425
           R M
Sbjct: 253 RAM 255


>gi|295094201|emb|CBK83292.1| methionyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 678

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 107/365 (29%), Gaps = 67/365 (18%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A    F+GY+V      ++ G +I   A   
Sbjct: 9   TTAIAYASGKP----HIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAFEN 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+     ++ E++   I K    Q  
Sbjct: 65  MQTPKEFVDETSGEIK-------RIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQG- 116

Query: 242 MKIIRDDLKALNIQHDIFISEDDF------------------------HRGDPSPIRDII 277
                D  K   +       E  F                        +    S  +D +
Sbjct: 117 -----DIYKGHYVGKYCTPCESFFTDGQLIDGKCPDCGRPVQEAKEEAYFFKMSKYQDKL 171

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGS 330
                Q   +                   + L    T          D      +  D  
Sbjct: 172 MKHIEQHPEFIQPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDAL 231

Query: 331 YTYFAADLAYFKC-KYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSEKKAQI 381
             Y    L Y    K +  F       ++++G D    H+ Y      +  A+     + 
Sbjct: 232 SNYITG-LGYDVDGKSDEKFYKYWPADLHLIGKDILRFHTVY---WPIMLMALGLPLPK- 286

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFC 440
             +      L  DG   KMSK  G+ +    +VD  G D+VRF +L            + 
Sbjct: 287 -QVFGHPWLLQSDG---KMSKSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWE 342

Query: 441 KVKEQ 445
            + E+
Sbjct: 343 LMVER 347


>gi|307150723|ref|YP_003886107.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980951|gb|ADN12832.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 908

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P    +           +  N    G   ++     N TG +H+GH     + DTL   
Sbjct: 13  DPKTTEEKWQKFWEEQKIFQANPSQGGPAYSLVIPPPNVTGSLHLGHAFDTALMDTLVRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+       I+ A       +++V    ++ L                        
Sbjct: 73  KRMCGFNTLCLPGIDHA-------SIAVQTILEKQL------------------------ 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L    ++  Q+    I + LK L +  D               +
Sbjct: 102 -KAEGKTRYDIGREKFLEKAWEWKQQSG-GTIVNQLKRLGLSADWSRQRFTLDESLSKAV 159

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 160 RRAFVQLYEAGLIYRG 175



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 97/296 (32%), Gaps = 30/296 (10%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                 F  E+W  + +D+ V+     I   L     Q   +    +           I+
Sbjct: 381 EDNSPRFIPERWTKVYRDWLVKLKDWCISRQLW-WGHQIPAWYVVSETGGQITDHTPFIV 439

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
                +    E        K   + D D     F S +           S   +     D
Sbjct: 440 AYSPEEAL--EKAQQQYGDKIQLEQDPDVLDTWFSSGL--------WPFSTMGWPEQTLD 489

Query: 338 LAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           LA +        GFD +I+         V R+  +A   +++    +V +  LV   RD 
Sbjct: 490 LATYYPTSTLVTGFD-IIFFW-------VARMTMMAGYFTDQMPFKDVYIHGLV---RDE 538

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK A + I    ++ + GSD++R+ ++        D      +   + +    V+
Sbjct: 539 NGKKMSKSANNGIDPLLLIRKYGSDALRYTLIREVAGAGQDISL---QYNRQTDESESVE 595

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
            +      ++  A+ +  +LD         P     + S+  +   L+ +   ++ 
Sbjct: 596 ASRNFANKLWNAARFVMMNLDGKTPQALGEPTSEALEASDRWI---LSRFALTVQQ 648


>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|254782368|sp|A9VTD5|SYI_BACWK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 921

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 117/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D +       V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFNPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 677 RY------MLVKLNDLITKVKDAYE-------TYDFAAVYHAIHNFC 710


>gi|315924479|ref|ZP_07920700.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622183|gb|EFV02143.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 880

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 54/191 (28%), Gaps = 32/191 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +     +   +   +   G    I     N TG +H+GH     + D L       G
Sbjct: 15  ENRIYDWWRNAGYFKPEVHPNGEAYTIIMPPPNITGQLHMGHAFDNTLQDALIRFKRMQG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y              ++  +++   +                        V  ++ ++ +
Sbjct: 75  YAAL-------WVPGMDHASIATEVK------------------------VLNQIKEEEN 103

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E++L    D++ +     IR  +  L    D          G    ++    
Sbjct: 104 RSKSDLTREEFLEYAWDWA-KFYRNRIRQQITKLGASCDWDRERFTMDEGCSKAVKSTFV 162

Query: 279 NLARQGYVYEG 289
            L   G +Y+G
Sbjct: 163 RLYEAGLIYKG 173


>gi|303229983|ref|ZP_07316757.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515349|gb|EFL57317.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 944

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 23/172 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A A + K    +VL    V    DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFNSSLLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSD 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G+D +R  +        +      VK+ S+          Y + R+ FR      
Sbjct: 630 IIDVYGADVMRLWVSSADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            D + +   +      SEFD     L+        V   + +A    E + L
Sbjct: 681 DDFNPNT-DKVAYADMSEFDK--WALLRL----EEVRQKVTDAYENYEFHML 725


>gi|295131910|ref|YP_003582586.1| glutamyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294979925|gb|ADF50390.1| glutamyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 505

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 88/287 (30%), Gaps = 38/287 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          GD +  +      +  +  Y+  A   I     
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAKKHGGDFILRI-----EDTDQNRYVEGAEKYIIDSLN 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                Y +               G Y +   K L   Y+ +L+      +      +   
Sbjct: 65  WCNIPYDEGPGKEKD-------CGPYRQSERKSLYKAYADKLIESGNAYY-----AFDSA 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R   +A            +      +   + +      G  Y      PK +  
Sbjct: 113 EDLDKHRKSHEAEGKTFIYNWHNREKLDNSLALPEEQVKKRIENGEHYVVRFKSPKDEIL 172

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D  R  +   + ++    D+ L KSDG  TY    LA     +     ++I   G +
Sbjct: 173 KISDEIRGNMEIDTNILD---DKVLYKSDGMPTYH---LANIVDDHLMKISHVIR--GEE 224

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               +     +  A      +   L   L    +     K+SKR GD
Sbjct: 225 WLPSLALHFMLYRAFGWAAPKFAHLPLILKPQGKG----KLSKRDGD 267


>gi|291551306|emb|CBL27568.1| methionyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 633

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 129/420 (30%), Gaps = 58/420 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   A
Sbjct: 3   EKPKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 62

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  ++ + N  +++         +  +     DK+        E++   I K    
Sbjct: 63  EEAGITPKEFVDNVSTEIK-------RIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYD 115

Query: 239 QAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLA 281
           +    I +   + +     + F +E     G                    +    D L 
Sbjct: 116 KG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPVQPAKEEAYFFKMSKYADRLI 173

Query: 282 RQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
                +   + P   K            Q   + R    +   +  D      +  D   
Sbjct: 174 EHINTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALT 233

Query: 332 TYFAADLAY-FKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINV 383
            Y    + Y         F+ +    ++++G D    + R   +      ++        
Sbjct: 234 NYITG-IGYDADGNSTEQFNKLWPADLHLIGKD----IIRFHTIYWPIFLMALDLPLPKQ 288

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
           +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L            +  +
Sbjct: 289 VFGHPWLLQGDG---KMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELM 345

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            E+   +    +     R  S+  +      +D     D D   + V+   S+   +++ 
Sbjct: 346 VERLNSDLANTLGNLVNRTVSMTNKYFGGTVEDKGVVEDVDAELKAVVENASKAVDAKMA 405


>gi|225869756|ref|YP_002745703.1| glutamyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699160|emb|CAW92383.1| glutamyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 481

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 96/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +     L  +Y  +LL   E K           
Sbjct: 57  RSQLENLKWLGIDWDESPETHER--YRQSERLALYQQYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++    + +         I      G V    L   ++   
Sbjct: 113 AAERERQEAAGETPRYVNEYLGMSAYEK------AAYIAEREAAGIVPTVRLAVNEAGVY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  ++F    VG   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWTDMVKGDIVFEGGNVG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +      +   +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAP----VFGHMTLIINSETGKKLSKRDTNTLQFIE 268


>gi|160874276|ref|YP_001553592.1| isoleucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189082331|sp|A9L4U7|SYI_SHEB9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160859798|gb|ABX48332.1| isoleucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266509|gb|ADT93362.1| isoleucyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 940

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 114/327 (34%), Gaps = 41/327 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + +W+P      ++ M++      I R     + I   +    ++ H    S 
Sbjct: 436 QALKEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVSL 495

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSY 331
           +  +   + +QG                  D+D  +LL         V   L +  D   
Sbjct: 496 MERVACRIEQQG-------------IQAWWDLDAAELLGDEAEQYRKVTDTLDVWFDSGS 542

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL      
Sbjct: 543 T-FSSVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF-- 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V +++G+D +R  +     S  +     ++  +S +  
Sbjct: 598 -TVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILNRSAD-- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R    +  +L+     ++++  E         ++   A   + I 
Sbjct: 654 ------AYRRIRNTAR---FLLANLNGFEPAKDLVAVEDMVALDRW-VVRRAAALQQEII 703

Query: 511 NATIAQEPYKLAFYLYDLAS-VFHGHW 536
            A      + +   L    S      +
Sbjct: 704 EAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|326407589|gb|ADZ64660.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 483

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 104/307 (33%), Gaps = 54/307 (17%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  RE ++ D 
Sbjct: 2   NKKIRVRY-APSPTGLLHIGNARTALFNYLFARHHGGDFIIRI-----EDTDRERHVEDG 55

Query: 171 GA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP 225
              Q+  L      R+    ++   +  E Y        Y K++ + L +  +      P
Sbjct: 56  ERSQLENL------RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLTEGKAYYSYKTP 109

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           EE      K  +       I +     + +   +I+E      +P  +R  +D       
Sbjct: 110 EELEADHAKQEAAGIAPHYINEYADMSDDEKAAYIAERKAQNIEP-VVRISVDE------ 162

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                         +  D+ +  + F    +G   D  + K DG  TY   + A     +
Sbjct: 163 ----------KAIYKWNDIVKGDIEFEGKNIG--GDWVIQKRDGYPTY---NFAVVVDDH 207

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    ++I   G DH     +   V  A+  +  Q       +  +       K+SKR  
Sbjct: 208 DMQISHVIR--GDDHIANTPKQLVVYDALGWEAPQFGH----MTLIINSETGKKLSKRDT 261

Query: 406 DFITLRH 412
           + +    
Sbjct: 262 NTLQFIE 268


>gi|256089093|ref|XP_002580651.1| valine-tRNA ligase [Schistosoma mansoni]
 gi|238666249|emb|CAZ36890.1| valine-tRNA ligase [Schistosoma mansoni]
          Length = 1183

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 60/213 (28%), Gaps = 33/213 (15%)

Query: 94  SPSYLRKILSSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           SP Y+  +       SG       I    K  +     N TG +H+GH     V D +  
Sbjct: 75  SPKYVEAMWYEWWERSGFFKPEFQIESPDKFVMVIPPPNVTGVLHLGHALTNSVEDAITR 134

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
               +G         + AG     +     WR ++   ++                    
Sbjct: 135 WHRMNGKVTLWVPGCDHAGIATQVVVEKKLWREKKLTRHDIGR----------------- 177

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             D++  E+  + EEK                I   L+AL    D   +           
Sbjct: 178 --DEFMKEVWKWKEEKG-------------DRIYQQLRALGSSCDWSRARFTMDPSMSKA 222

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +    L   G +Y  +     S T +    D
Sbjct: 223 VTEAFIRLYNDGLIYRSLRLVNWSCTLRSAISD 255


>gi|225021674|ref|ZP_03710866.1| hypothetical protein CORMATOL_01702 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945665|gb|EEG26874.1| hypothetical protein CORMATOL_01702 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 882

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 73/241 (30%), Gaps = 41/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   L    V    +  ++       +I     N TG +H+GH     + D +A  
Sbjct: 15  DPATVESALYQEWVDRGYFTADVNSLKPAFSIVLPPPNVTGQLHMGHALDHTLMDAIARR 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++   +                        V   L
Sbjct: 75  KRMQGYEVL-------WLPGMDHAGIATQSK------------------------VETRL 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +       ++  E+++  V ++  +     I + ++A+    D          G    +
Sbjct: 104 KETEGKTRWDYSREEFIAKVWEWK-REFGGTIGEQMRAIGDSVDWSRERFTLDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L  +G +Y        S   +           D+D + +  R   + DD    +
Sbjct: 163 QTIFKQLYDRGLIYRAHRLINWSPVLETAVSDIEVVYKDVDGELVSIRYGSLDDDQPHVV 222

Query: 325 L 325
           +
Sbjct: 223 V 223


>gi|322386701|ref|ZP_08060326.1| glutamate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269374|gb|EFX52309.1| glutamate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 485

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R+  +A   +   +I+E   + G     +           +   +        
Sbjct: 109 EEELAAERECQEAAG-ETPRYINE---YLGMSEEEKAAYIAEREAAAIIPTVRLAVNEAG 164

Query: 299 TQKC-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             K  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G
Sbjct: 165 IYKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|282849351|ref|ZP_06258736.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581055|gb|EFB86453.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 944

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 23/172 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A A + K    +VL    V    DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFNSSLLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSD 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G+D +R  +        +      VK+ S+          Y + R+ FR      
Sbjct: 630 IIDVYGADVMRLWVSSADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            D + +   +      SEFD     L+        V   + +A    E + L
Sbjct: 681 DDFNPNT-DKVAYADMSEFDK--WALLRL----EEVRQKVTDAYENYEFHML 725


>gi|189500911|ref|YP_001960381.1| glutamyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692265|sp|B3EMG1|SYE_CHLPB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|189496352|gb|ACE04900.1| glutamyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 503

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 103/297 (34%), Gaps = 25/297 (8%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
               G +V   F + +PTG +HVG  R A+     A      G +        D   ++ 
Sbjct: 2   QATPGQRVRTRF-APSPTGHLHVGGLRTALYNYLYA---KSMGGDFIVRIEDTDQARKVE 57

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               S+    +      D     G   G Y++     +  KY  +LL   ++ +      
Sbjct: 58  GAERSLLNTLEVTGIVPDESFIHGGNFGPYVQSERLGIYSKYCEQLLEQ-KQAYYCFSTA 116

Query: 236 YSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             ++A  K+     + +  ++D  ++ E+       S IR        +G  +   +  P
Sbjct: 117 EELEANRKLQMK--QGMQPKYDRKWLPEEMGGNMPESEIR----RKREEGAPFVVRMKVP 170

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
              +    DM R  + F S  V    D+ L+KSDG  TY     A     +     ++I 
Sbjct: 171 DYISIMFEDMIRGPIEFDSATVD---DQVLMKSDGFPTYHF---ASIIDDHLMEISHVIR 224

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             G +    + +   +      +  ++       + L  +    K+SKR GD     
Sbjct: 225 --GEEWLSSMPKHILLYEFFGWEPPKVAH-----LPLLLNPDRSKLSKRQGDVAAED 274


>gi|168205784|ref|ZP_02631789.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662741|gb|EDT15424.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 645

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 117/348 (33%), Gaps = 78/348 (22%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S N    +H+G+    V  D +A     +G+EV      ++ G +I  +A        
Sbjct: 14  YPSTN----LHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIANE------ 63

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  ++  +   + D +  +++N   +K++    DY V+A+ +I +
Sbjct: 64  -----------KGITPKEHVDEIVAGIKDLW--KMMNISYDKFIRTTDDYHVKAVQEIFK 110

Query: 247 DDLKALNIQHDIFIS-----------EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 +I  D +             E     G+       ++    + Y ++      +
Sbjct: 111 KLYDQGDIYKDSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKAKEEAYFFKMSKYADR 170

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD- 350
                +   D  Q   R   + ++  RP             DL   +  +  G    FD 
Sbjct: 171 LIQYIEEHPDFIQPESRKNEMLNNFLRP----------GLQDLCVSRTSFTWGIPVSFDE 220

Query: 351 -NMIYVM-------------GSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++IYV              G +    Y K   A    + +   + + +   ++ +    
Sbjct: 221 KHVIYVWIDALSNYITALGYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGL 280

Query: 396 M--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                            KMSK  G+ +    +V+  G+D+VR+ +L  
Sbjct: 281 ELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLRE 328


>gi|51598989|ref|YP_073177.1| valyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81825616|sp|Q660D6|SYV_BORGA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51573560|gb|AAU07585.1| valyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 875

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 67/223 (30%), Gaps = 40/223 (17%)

Query: 90  NLYL----SPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           N  L     P      + +  + + +    N + +   +       N TG +H+GH    
Sbjct: 2   NFRLLEKYDPKAFEDEIYNKWLKNNVFLPNNSLFEKFSMVA--PPPNVTGVLHMGHALNF 59

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V+ D L        +     +  + AG        +VF R  + +  + +D         
Sbjct: 60  VLQDILVRYKRMKKHNTLWLFGTDHAG----IATQTVFERNLKNIGKSKNDFE----REE 111

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           ++K +  +L DK+   ++N                         +K L   +D       
Sbjct: 112 FVKEI-FKLKDKHRGVIVNQ------------------------IKKLGASYDHSRERFT 146

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                   +  +  +L  +G +Y G         +     D +
Sbjct: 147 LDESLCKAVNKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|294670517|ref|ZP_06735397.1| hypothetical protein NEIELOOT_02239 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307796|gb|EFE49039.1| hypothetical protein NEIELOOT_02239 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 557

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 98/296 (33%), Gaps = 39/296 (13%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  L    + ++ P      +QAM++      + R       +   +     + H     
Sbjct: 291 NKALKAVDDTEFFPTWGRARLQAMIEGRPDWVVSRQRFWGTPMTFFVHKDTGELHPDSAR 350

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   +  +G      L   +  + + C+   K        + D +D  +    GS 
Sbjct: 351 LLEEVAKRIEEKGIEAWFALNKSELLSAEDCENYDK--------LSDTMD--VWFDSGST 400

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A   +     +L    V 
Sbjct: 401 HYSV-----LKQREELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAPYKQLLTHGFVV 455

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 456 ---DQNGRKMSKSLGNVVAPQEVYNEFGADILRLWTAATDYSGELAISKEILKRVTE--- 509

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAE 504
                 +Y R R+  R       D +      + +PQ    E D   L +   L E
Sbjct: 510 ------SYRRLRNTLRFLLANLSDFN---PIEDAVPQADMVEIDRYALVMARQLQE 556


>gi|227535262|ref|ZP_03965311.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187146|gb|EEI67213.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 880

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 55/212 (25%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +        +    +  +   K    +I     N TG +H+GH     + D +   
Sbjct: 11  DHKAVEAGRYQEWLDEDVFKPSGDQKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRE 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 71  KRMQGFDTL-------WLPGMDHAGIATQAKVEAKL------------------------ 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   +K++  V ++      K I      + +  D          G    +
Sbjct: 100 -RKEGISRYDLGRDKFVQKVWEWK-DEFAKTIHSQWAKMGLSLDYSRERFTLDTGLNEAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L +QG +Y G          +    D
Sbjct: 158 RKVFVELYKQGLIYRGEYIVNWDPQARTALSD 189



 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 100/308 (32%), Gaps = 66/308 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
            + G  Y G +  PK     + D D     F S      TM   D D P    D    Y 
Sbjct: 423 KQTGETYVG-MEAPKDIENWQQDPDVLDTWFSSALWPFSTMGWPDTDSP----DYKRYYP 477

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
              L             MI+        +            E+  +  ++      L RD
Sbjct: 478 TDTLVTGYDIIPFWVARMIF-----QGLHFT---------GERPFKYTLIHG----LMRD 519

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ I    V+++ G+D++R+ ++   K  +   F + +V+          
Sbjct: 520 EQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDTRFSYKQVEAAWNF----- 574

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +I R     F  ++     +   P  S FD S+  L    A+    I+  T
Sbjct: 575 ----INKIWNISR-----FVMMNLGDLEKPQQPDPSTFDLSDKWL---FAQLNETIKQVT 622

Query: 514 IAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLV 563
              E      +        LY+   +VF   +           +  ++ K     R+ L 
Sbjct: 623 DLSE-----RFEFGEMGRTLYNFTWNVFADWY----VEMSKEVLYGDDEKAKAAKRVNLA 673

Query: 564 HAVASIIN 571
           +A+  I+ 
Sbjct: 674 YALDQILR 681


>gi|116327083|ref|YP_796803.1| bifunctional glutamate--tRNA ligase/glutamine-- tRNA ligase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116332260|ref|YP_801978.1| bifunctional glutamate--tRNA ligase/glutamine-- tRNA ligase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
 gi|122280013|sp|Q04PF0|SYE_LEPBJ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|122285070|sp|Q055X5|SYE_LEPBL RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116119827|gb|ABJ77870.1| Bifunctional glutamate--tRNA ligase/glutamine-- tRNA ligase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116125949|gb|ABJ77220.1| Bifunctional glutamate--tRNA ligase/glutamine-- tRNA ligase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 521

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 106/293 (36%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +P+G +HVG  R A+     A       ++     +  R             +  S+ 
Sbjct: 12  APSPSGFLHVGGARTALFNYLYAKSQGGKFILRIEDTDQNRS-----TEDSFKIILESLK 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     +     G   G Y++    ++  +Y+ +LL     K     + +  Q  +
Sbjct: 67  WLGVRWDEGPE----IGGEYGPYIQSQRLDIYKEYTEKLL-----KEKKAYRCFCTQEEL 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +   +A+ + +      D  H        ++ + L ++  +   I     SKT    
Sbjct: 118 EAKKKQAEAMGVPYVY----DGLHANMSD--EEVEEKLKQK--IPYSIRFKTPSKTLIVD 169

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ + ++ F + ++GD +   ++KSDG  +Y   + A           ++I   G  H  
Sbjct: 170 DIIQGKVKFETKLIGDFI---IVKSDGFPSY---NYAVVVDDALMKITHVIR--GVGHLS 221

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
              R   +  A+  +  +       +    +     K+SKRAG    +  R +
Sbjct: 222 NTPRQILLYEALDYEIPEFAHASEIVGMDGK-----KLSKRAGATSILAFRDL 269


>gi|114566494|ref|YP_753648.1| isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318441|sp|Q0AYC7|SYI_SYNWW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114337429|gb|ABI68277.1| Isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 927

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 27/187 (14%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+     + A A+        VL    V    D    KMSK  G+ +    
Sbjct: 555 YLEGSDQHRGWFNSSLSTAVAIRGAAPYREVLTHGFVV---DEQGRKMSKSLGNVVDPLR 611

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +  E+G+D +R  +        +      +K+ ++         AY + R+  R      
Sbjct: 612 MTREMGADILRLWVSSADYRNDVSVSPNIIKQSAE---------AYRKIRNTCRFILGNL 662

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            D D     +  +  +   +  +  L+  L +  R +  A    E + +          F
Sbjct: 663 FDFDPG---KERVSYDKLSELDQWALLK-LDKLIRRVTKAYEDYEFHVV----------F 708

Query: 533 HGHWSHG 539
           H   +  
Sbjct: 709 HSMHNFC 715


>gi|117921574|ref|YP_870766.1| isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166229771|sp|A0KZZ1|SYI_SHESA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117613906|gb|ABK49360.1| Isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 940

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 113/338 (33%), Gaps = 41/338 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  +  +     L    + +W+P      ++ M++      I R     + I   +   
Sbjct: 425 FISMDNQNLRKQALSEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRE 484

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            ++ H    S +  + + + ++G                  D+D  +LL         V 
Sbjct: 485 TEELHPDSVSLMARVANRIEQEG-------------IQAWWDLDAAELLGEEAEQYRKVT 531

Query: 322 RPL-LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
             L +  D   T FA+ +      +  G D  +Y+ GSD   G+      ++ A++ K  
Sbjct: 532 DTLDVWYDSGST-FASVVGARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMTGKAP 588

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL         DG   KMSK  G+ I  + V +++G+D +R  +     S  +    
Sbjct: 589 YKQVLTHGF---TVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVS- 644

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++  +S +        AY R R+  R         D     ++++  E          +
Sbjct: 645 DEILNRSAD--------AYRRIRNTARFLLANLNGFD---PAKDLVAVEDMVALDRWA-V 692

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
              A   + I  A      + +   L    S      +
Sbjct: 693 RRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|307207156|gb|EFN84946.1| Methionyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 566

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 73/486 (15%), Positives = 147/486 (30%), Gaps = 70/486 (14%)

Query: 75  DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
           +P   S+F     F+   +  S   + +    V  +        K     I +V+A P  
Sbjct: 6   EPSKSSIF----PFLFRNIRRSTWGQTVRRQYVRDLS-----QNKCITTPIFYVNAGP-- 54

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
             H+GH   AV+ D +A   A  G+        ++ G +I   A +      +       
Sbjct: 55  --HIGHLYSAVLADAIARYHAMLGHRTFLITGTDEHGNKIKAAAAAAGLPNLEYCTKVSQ 112

Query: 195 DLPEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKWLPIVK----------DYSVQ 239
              E           +++   K+  D          E   + + K           +   
Sbjct: 113 QFRELCDRFEVDYSRFIRTTEKQHCDAVHHFWKRLEERGHIYLGKYAGWYCVSDEAFLSD 172

Query: 240 AMMKIIRDD------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEG 289
           A +   +D       + A +     +  E+++     +   D+   L  +      +Y  
Sbjct: 173 AELVEQKDSTGETIKVSAESGNTVEWTEEENYKFRLSALQDDLKYWLKDENTVRPALYHK 232

Query: 290 ILPPPKSKTTQKCDMD----RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           IL     + T   D+     R ++ +      ++     +  D    Y  A L Y    +
Sbjct: 233 ILSEWVEEGTCLRDLSISRTRNKVPWAMLSPCNESHSIYVWMDALVNYLTA-LGYPNESF 291

Query: 346 ERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           +  +   + V+G D    H  Y     A   A   +  +  +     +         KMS
Sbjct: 292 KEFWPPAVQVIGKDILKFHGVY---WPAFLIAAGLEPPKTLLCHAHWIVD-----HQKMS 343

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRK-NSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           K  G+ I+     ++   D +R+ +L         ++   K+            + A   
Sbjct: 344 KSKGNVISPFEAANDYSEDGLRYFILREAVPQNDTNYSSTKITNVLNS------ELADTL 397

Query: 461 CRSIFRQAKD-IFPDLDFDLFPR--NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
              + R A   + P  +F    +  NV+  E   +T E      L         +     
Sbjct: 398 GNLVSRCAGKTVNPSREFPDPAKYWNVLQSEVANETRE-----ALQSLGEKTRKSYEEYN 452

Query: 518 PYKLAF 523
            + +  
Sbjct: 453 LHHVVD 458


>gi|114048530|ref|YP_739080.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944450|sp|Q0HS82|SYI_SHESR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113889972|gb|ABI44023.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 940

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 113/338 (33%), Gaps = 41/338 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  +  +     L    + +W+P      ++ M++      I R     + I   +   
Sbjct: 425 FISMDNQNLRKQALSEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRE 484

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            ++ H    S +  + + + ++G                  D+D  +LL         V 
Sbjct: 485 TEELHPDSVSLMARVANRIEQEG-------------IQAWWDLDAAELLGEEAEQYRKVT 531

Query: 322 RPL-LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
             L +  D   T FA+ +      +  G D  +Y+ GSD   G+      ++ A++ K  
Sbjct: 532 DTLDVWYDSGST-FASVVGARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMTGKAP 588

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL         DG   KMSK  G+ I  + V +++G+D +R  +     S  +    
Sbjct: 589 YKQVLTHGF---TVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVS- 644

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++  +S +        AY R R+  R         D     ++++  E          +
Sbjct: 645 DEILNRSAD--------AYRRIRNTARFLLANLNGFD---PAKDLVAVEDMVALDRWA-V 692

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
              A   + I  A      + +   L    S      +
Sbjct: 693 RRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|114567864|ref|YP_755018.1| glutamyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317264|sp|Q0AUF7|SYE2_SYNWW RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|114338799|gb|ABI69647.1| glutamyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 490

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 97/286 (33%), Gaps = 46/286 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          G+ +  +         REY         + +  
Sbjct: 16  APSPTGPLHIGGARSALFNYLFASRYNGEMVLRIEDTDLERSRREY--------ESEIID 67

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W         D+  P       Y +     +  +Y+ +LL   +  +      +  +
Sbjct: 68  SLKWLGLGWSEGIDTGGP----NEPYRQTERLAIYQEYTKKLLEAGQAYYC-----FCSE 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +++ R DL                   +        +   +QG         P  +  
Sbjct: 119 KELEVERQDLLDSGQMQKYSGKCRQLSMAER-------EEKLKQGIKPAIRFKVPAHQLH 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R ++ F S  +GD +   ++KSDG  TY   + A        G  ++I     +
Sbjct: 172 IVDDLVRGRVSFDSDDIGDFI---IVKSDGIPTY---NFAVVIDDVLMGISHVIR--AEE 223

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R   +  A++ ++ +        + L       KMSKR G
Sbjct: 224 HLSNTPRQLMIYDALNFRRPEFAH-----ISLILGSDRQKMSKRHG 264


>gi|70727520|ref|YP_254436.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|82582279|sp|Q4L3E7|SYM_STAHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68448246|dbj|BAE05830.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 659

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 108/349 (30%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD ++      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVISRYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E+++           + ++   +D   Q + K+    LK 
Sbjct: 67  TELEYLDEMISGIKSLWSKLEISN-----------DDFIRTTEDRHKQVVEKVFERLLKQ 115

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I    +                ++D +   G +   +         +   +  +   F
Sbjct: 116 GDIYLGEYEGWYSVPDETYYTESQLVDPIYENGKI---VGGKSPDSGHEVELVKEESYFF 172

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG------ 348
                    DR L   D +  +                    DLA  +  ++ G      
Sbjct: 173 NINKY---TDRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSN 229

Query: 349 FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             +++YV                 D   + K   A    ++++  + + ++  ++ +  D
Sbjct: 230 PKHVVYVWIDALVNYISALGYLSDDDELFQKYWPADVHLMAKEIVRFHSIIWPILLMALD 289

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 290 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|146295745|ref|YP_001179516.1| glutamyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|238685555|sp|A4XHE0|SYE1_CALS8 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|145409321|gb|ABP66325.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 485

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L       +      Y  +  +
Sbjct: 63  WLGIEW----DEGVEVGGPYGPYRSTERVDIYKKYVDVLFEKGYAYYC-----YCTEEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R +L +   Q   ++ +        +   D      ++G         P+       
Sbjct: 114 EAQRQELLSKG-QMPRYLGKC------RNLTEDQKRRFEQEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGDVEFLSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALGFELPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|307286738|ref|ZP_07566824.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502216|gb|EFM71500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165210|gb|EFU09227.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 677

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 24  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 74  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 121 LVKQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 177

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 178 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 235

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 236 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 295

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 296 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 346


>gi|296328555|ref|ZP_06871074.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154364|gb|EFG95163.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 887

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEDGLKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L   G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 RKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 106/357 (29%), Gaps = 67/357 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +               +F+            + +       + +   
Sbjct: 394 WLENIRDWCISRQIWWGHRIPAWYGPDRHVFV-----------AMDEAEAKEQAKKHYGH 442

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    +             L   STM   +  + L            DL Y       G
Sbjct: 443 DVELSQEEDVLDTWFSS--ALWPFSTMGWPEKTKEL------------DLFYPTNTLVTG 488

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +I+   +           +      KK     +    +   RD +  KMSK  G+  
Sbjct: 489 AD-IIFFWVAR--------MIMFGMYELKKIPFKNVFFHGI--VRDEIGRKMSKSLGNSP 537

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               ++ E G D++RF M++   S+  D  F         N  F  +   A    I    
Sbjct: 538 DPLDLIKEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLE 594

Query: 469 KDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                 +D       ++ +   S  + +   +   L ++   ++NA  A         +Y
Sbjct: 595 GFDVKSVDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VY 643

Query: 527 D-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           + L   F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 644 EFLRGDFCDWY---VEIAKIRLYNDDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|291530000|emb|CBK95585.1| methionyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 642

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 102/341 (29%), Gaps = 67/341 (19%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S NP    H+GHC   V  DT+A      GY+V      ++ G +I   A        
Sbjct: 13  YPSGNP----HIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAE------ 62

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  Y+  +       + +  +++   +++    DY ++ + KI R
Sbjct: 63  -----------KGVTPKEYVDEIVANFKRLWETMHISYD--RFIRTTDDYHIETVQKIFR 109

Query: 247 DDLKALNIQHDIFIS-------------------------------EDDFHRGDPSPIRD 275
              +   I    +                                 E+ +          
Sbjct: 110 KLYEKGYIYKGTYKGKYCTPCESFWTESQLVDGKCPDCGREVKEANEEAYFLRLSDFADK 169

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGS 330
           I   L    Y+              K  ++   +   S   G     D      +  D  
Sbjct: 170 IEKFLTETDYLQPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDAL 229

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK---RLEAVAAAVSEKKAQINVLLCE 387
             Y +A L Y   KY   F+       +D     K   R  ++   +      + +    
Sbjct: 230 SNYISA-LGYGNEKYN-DFEKY---WPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHL 284

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               + +    KMSK  G+ +    + +  G D+VR+ +L 
Sbjct: 285 YGHGWINFNGDKMSKSKGNVVDPFVLCERYGVDAVRYQILR 325


>gi|89892874|ref|YP_516361.1| hypothetical protein DSY0128 [Desulfitobacterium hafniense Y51]
 gi|89332322|dbj|BAE81917.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 647

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 126/433 (29%), Gaps = 88/433 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    H+G     V  D  A      G++V                        Q+ +  
Sbjct: 12  PNASPHIGTAYTTVAADAFARYHRLKGHDVY--------------FLTGTDENAQKIVRT 57

Query: 192 NDSD--LPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIR 246
            +S    P  Y  GV  +     E  D    + +   EE+   +VK     +     I +
Sbjct: 58  AESQGMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYK 117

Query: 247 DDLKALNIQ-HDIFISEDDFHRG---DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + +       + F +E+    G   +P   RD ++ L  + Y ++            K 
Sbjct: 118 SEYEGWYCTPCETFWTENKLIDGKCPNPDCGRD-VELLKEESYFFKLSKYQDALLRHIKD 176

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM 356
             D  Q   R   +   ++  L            DL   +  ++ G        +++YV 
Sbjct: 177 HPDFIQPASRRNEMIKFIEGGL-----------EDLCVSRTTFQWGIQVPFNPKHVVYVW 225

Query: 357 -GS-----------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---------- 394
             +           D   Y +   A    + +   + + ++  ++ +  D          
Sbjct: 226 LDALINYISALGYPDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGH 285

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                    K+SK  G+      ++   GSD++R+ +L                 Q   +
Sbjct: 286 GWYLSKEGGKISKSRGNVQDSFKLIRRYGSDAIRYFLLRE--------------MQVGTD 331

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFDTSELQLIVHLAEYP 506
             +       R  S        F      +  +    VIP+  E    E +L   L +  
Sbjct: 332 GAYSEDSLVERLNSDLANDLGNFVSRSLAMIVKYRGGVIPKAGEPTELEAEL-RALGQ-- 388

Query: 507 RVIENATIAQEPY 519
            V+       E +
Sbjct: 389 EVVAKVEERLEAH 401


>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 487

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 101/312 (32%), Gaps = 36/312 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R  +V D +   + + GY V               +   +  R +         +
Sbjct: 38  HVGHGRSLIVFDMIRRYLRYLGYNVI-------FVRNFTDVDDKIINRAKNEC------V 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P       Y+K    + A+K+  E  +        I     ++ + ++I     A  +  
Sbjct: 85  PFTVISDKYIKEY-FDDAEKFRIEPADIEPRVTTHIPD--IIKFIQELIDKGY-AYEVDG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ S   F        R I + LA       G    P  K     D     L   +   
Sbjct: 141 DVYFSVRKFKDYGKLSKRSIDELLA-------GARIEPGEKKKDPLDF---ALWKSAKAG 190

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVS 375
               + P  K  G   +     A       +     I + G          E  +A A S
Sbjct: 191 EPYWESPWGK--GRPGWHTECCAMIF----KHLGETIDIHGGGLDLTFPHHENEIAQAES 244

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
                          +  +G   KMSK  G+++TL+ +  +   D +R ++L       L
Sbjct: 245 LTGKPFARYWIHNGLVTVNGQ--KMSKSLGNYVTLKEIYSKYEPDILRLLVLSVHYRSPL 302

Query: 436 DFDFCKVKEQSK 447
           DF + K++E  K
Sbjct: 303 DFSWDKMEETKK 314


>gi|270307798|ref|YP_003329856.1| valyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153690|gb|ACZ61528.1| valyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 880

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 52/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K      +    +  N         I     N TG +H+GH   A + D +        
Sbjct: 20  EKKWYQYWMGKGYFKPNPDSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIR------ 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                             L     W            LP   + G+  + V +    K  
Sbjct: 74  --------------WHRMLGEPALW------------LPGADHAGIAAQVVVERELAKQG 107

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   E +L  + ++ V    + IR     L    D          G    +R+I  
Sbjct: 108 KTRQELGRELFLEKMWEW-VNPCRERIRHQHMRLGASCDWDRETFTLDEGPVKAVREIFT 166

Query: 279 NLARQGYVYEG 289
           NL  +G +Y G
Sbjct: 167 NLYEKGLIYRG 177


>gi|49482757|ref|YP_039981.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424641|ref|ZP_05601068.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427309|ref|ZP_05603708.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429945|ref|ZP_05606329.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432647|ref|ZP_05609007.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435551|ref|ZP_05611599.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282903115|ref|ZP_06311006.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904905|ref|ZP_06312763.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907855|ref|ZP_06315690.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910168|ref|ZP_06317972.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913360|ref|ZP_06321149.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282915850|ref|ZP_06323615.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282918315|ref|ZP_06326052.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282923277|ref|ZP_06330957.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283769683|ref|ZP_06342575.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283957325|ref|ZP_06374778.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500406|ref|ZP_06666257.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509351|ref|ZP_06668062.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293523938|ref|ZP_06670625.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427065|ref|ZP_06819701.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|56749425|sp|Q6GJE1|SYE_STAAR RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|49240886|emb|CAG39553.1| putative glutamyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272211|gb|EEV04334.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275502|gb|EEV06975.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279142|gb|EEV09743.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282062|gb|EEV12197.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284742|gb|EEV14861.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282314145|gb|EFB44535.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317449|gb|EFB47821.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282320146|gb|EFB50491.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282322392|gb|EFB52714.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325560|gb|EFB55868.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328239|gb|EFB58517.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331730|gb|EFB61241.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596070|gb|EFC01031.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283459830|gb|EFC06920.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283469820|emb|CAQ49031.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790776|gb|EFC29591.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920901|gb|EFD97962.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095411|gb|EFE25672.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467448|gb|EFF09963.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295128853|gb|EFG58483.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|302332241|gb|ADL22434.1| putative glutamyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|315193891|gb|EFU24285.1| putative glutamyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 484

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|325263634|ref|ZP_08130368.1| valine--tRNA ligase [Clostridium sp. D5]
 gi|324031343|gb|EGB92624.1| valine--tRNA ligase [Clostridium sp. D5]
          Length = 882

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 49/198 (24%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +             +   +              N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIEDKTYERWCGNKYFHAEVDRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D       G        
Sbjct: 68  RYKRMEGYNAL-------WIPGTDHAAISTEVKVTNQLKEEGIDKKTLGREG-------- 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                       F E  W         +     I + LK L I  D          G   
Sbjct: 113 ------------FLERTWQ------WKEEYAGTIENQLKKLGISCDWDRERFTMDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +GY+Y+G
Sbjct: 155 AVEEVFIKLYEKGYIYKG 172


>gi|323703627|ref|ZP_08115270.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531399|gb|EGB21295.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 882

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 74/273 (27%), Gaps = 44/273 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +         +   +   +        I     N TG +H+GH     + D L   
Sbjct: 14  NPKEVEGKWYRHWENSKYFHAEVEKDKKPFCIVMPPPNVTGQLHMGHALDNTLQDILTRW 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY        + AG       ++   + ++ L                        
Sbjct: 74  RRMQGYNAMWVPGTDHAG-------IATQAKVEEQL------------------------ 102

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK+L  V  +  Q   + I   L+ L    D          G    +
Sbjct: 103 -AKEGLTKYDLGREKFLERVWAWKEQYGNR-ITTQLRRLGASCDWDRERFTMDEGCSKAV 160

Query: 274 RDIIDNLARQGYVYEGIL--------PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +++   L  QG +Y                S    +      QL +      D+ D  + 
Sbjct: 161 QEVFIRLFEQGLIYRDYYITNWCPHCQTTISDIEVEHQDKPGQLYYIKYPCKDNPDEYIT 220

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +         D+A      +   D  ++++G 
Sbjct: 221 IATTRPETMLGDVAVAVNPED---DRYLHLVGK 250


>gi|294648748|ref|ZP_06726207.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825362|gb|EFF84106.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 945

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 102/303 (33%), Gaps = 39/303 (12%)

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVD--------RPLLKSD 328
           L +         P    +  Q  + +     +    S  +G D +          +    
Sbjct: 491 LHKDTNALHPRTPELIEEVAQLIEQEGIDAWYNRDASDFIGADAEHYNAVRDTLDVWFDS 550

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y     A  + + E      +Y+ GSD   G+ +     + A++E+     +L   
Sbjct: 551 GTTHY-----AVLREREELQDPADLYLEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHG 605

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    D    KMSK  G+ IT + ++ ++G+D +RF +         +    K      
Sbjct: 606 FVV---DEKGRKMSKSLGNIITPQDIIKDMGADGLRFWIAS--ADYRYEMTAGKEIFSRA 660

Query: 448 ENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
            +        Y R R+  R   A         D  P + +    ++      ++   AE 
Sbjct: 661 SD-------GYRRIRNTLRFLLANLNGFKPSTDALPVDELIALDQY------ILQRAAEV 707

Query: 506 PRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
            + I+ A      + +   L +   +   G +    ++ +    +A+++     +  L H
Sbjct: 708 QKTIQQAYEEMNFHIVTNALTNFCINDLGGFYLDIIKDRQYTT-KADSQARRSAQTALYH 766

Query: 565 AVA 567
            V 
Sbjct: 767 LVQ 769


>gi|255321491|ref|ZP_05362649.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255301347|gb|EET80606.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 823

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 29/72 (40%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL   P+ + K    I     E+         K  I  +   P+G +H+GH R   +GD 
Sbjct: 4   NLKYEPAKIEKKWQEIWSKNGEFEPKDDYSLPKKYILSMFPYPSGRIHMGHVRNYTIGDA 63

Query: 150 LASLMAFSGYEV 161
           LA      GY V
Sbjct: 64  LARYYRKHGYNV 75


>gi|239908621|ref|YP_002955363.1| glutamyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239798488|dbj|BAH77477.1| glutamyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 464

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 101/292 (34%), Gaps = 43/292 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+    LA    F G  + R   I D   Q +   ++   
Sbjct: 4   IVTRFAPSPTGYLHIGGARTAIFNWLLAR--HFGGTFLLR---IEDTDLQRSQSDMT--- 55

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
              Q++ +    L   +   +  +    +L ++Y  ++L      W        V+AM +
Sbjct: 56  ---QSILDAMEWLGLDHDGEITYQSQRFDLYNEYIDKMLETGHAYWCS-CSPEEVEAMRE 111

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R   K L  ++     E     G    +R                L  P +  T   D
Sbjct: 112 EARQ--KGLKPKYSGRCREAGLGPGPGRVVR----------------LKAPVTGATLVDD 153

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           M +  +   S    +  D  L + DGS TY   +LA        G  ++I   G DH   
Sbjct: 154 MVKGPV---SIDNAELDDMVLRRGDGSPTY---NLAVVVDDATMGVTHIIR--GDDHLNN 205

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
             R   +  A+     +        V +       K+SKR G    + + V+
Sbjct: 206 TPRQILIYKALGFDLPRFGH-----VPMILGPDKKKLSKRHGATAVMEYEVE 252


>gi|113971292|ref|YP_735085.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|122943610|sp|Q0HFY9|SYI_SHESM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113885976|gb|ABI40028.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 940

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 113/338 (33%), Gaps = 41/338 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  +  +     L    + +W+P      ++ M++      I R     + I   +   
Sbjct: 425 FISMDNQNLRKQALSEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRE 484

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            ++ H    S +  + + + ++G                  D+D  +LL         V 
Sbjct: 485 TEELHPDSVSLMARVANRIEQEG-------------IQAWWDLDAAELLGEEAEQYRKVT 531

Query: 322 RPL-LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
             L +  D   T FA+ +      +  G D  +Y+ GSD   G+      ++ A++ K  
Sbjct: 532 DTLDVWYDSGST-FASVVGARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMTGKAP 588

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL         DG   KMSK  G+ I  + V +++G+D +R  +     S  +    
Sbjct: 589 YKQVLTHGF---TVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVS- 644

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++  +S +        AY R R+  R         D     ++++  E          +
Sbjct: 645 DEILNRSAD--------AYRRIRNTARFLLANLNGFD---PAKDLVAVEDMVALDRWA-V 692

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
              A   + I  A      + +   L    S      +
Sbjct: 693 RRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFY 730


>gi|121730028|ref|ZP_01682440.1| isoleucyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628232|gb|EAX60751.1| isoleucyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 949

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKSKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|186684785|ref|YP_001867981.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186467237|gb|ACC83038.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 994

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 55/212 (25%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P                Y  +    G    I     N TG +H+GH   + + DTL   
Sbjct: 13  DPFSTEAKWQKFWEDNQVYKADPNKGGEPYCIVIPPPNVTGSLHMGHAFESALIDTLVRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                           +  L+   +D        +  K + KE 
Sbjct: 73  HRMQG---------------------------RNTLWLPGTDHASIAVHSMLEKQLKKEG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y      F E  W    K  S   ++      L+ L +  D          G    +
Sbjct: 106 KTRYELGREKFLERAWQ--WKAESEGTILNQ----LRRLGVSVDWSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    L  +G +Y G         +Q    D
Sbjct: 160 VEAFTRLYEEGLIYRGEYLVNWCPASQSAVSD 191



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 97/290 (33%), Gaps = 38/290 (13%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           ++W  + +D+ V+     I   L     Q   + +  +           ++     +   
Sbjct: 390 QRWTKVYRDWLVKLKDWCISRQLW-WGHQIPAWYAISETDGQITDNTPFVVA--KSETEA 446

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK--CK 344
           +E            + D D     F S +           S   +     DLA +     
Sbjct: 447 WEKAKSQFGENVKLEQDPDVLDTWFSSGL--------WPFSTLGWPEQTQDLATYYPTTT 498

Query: 345 YERGFDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
              GFD +I+   +     +G+  +       +  +   I+        L  D    KMS
Sbjct: 499 LVTGFD-IIFFWVARMTMMAGHFTQQ------MPFQTVYIH-------GLVLDEKGQKMS 544

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ I    ++D+ G+D++R+ ++        D      +++ +      V+ +    
Sbjct: 545 KTKGNGIDPLLLIDKYGTDALRYTLIREVAGAGQDIRLEYDRKKDES---ASVEASRNFA 601

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             ++  A+ +  +LD     +   P  +E     +     ++ Y +VI+ 
Sbjct: 602 NKLWNAARFVMMNLDGQTPQQLGNPVATELSDRWI-----ISRYHQVIKQ 646


>gi|325955471|ref|YP_004239131.1| Valyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438089|gb|ADX68553.1| Valyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 873

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +   +  +    Y R+   +     I     N TG +H+GH     + D L   
Sbjct: 8   TPQAVEEKWYNYWLEN-NYFRSTPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +    L        E             E 
Sbjct: 67  ARMRGYNAC-------WVPGTDHASIATEAKVVAKLKEQGISKEEIGR--EKFLEHAWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                          +I D LK L    D   ++   +      +
Sbjct: 118 THEYG------------------------GVILDQLKKLGASCDWDRTQFTMNESLSKAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           + +  +L  +G +Y G          +    D +
Sbjct: 154 QQVFVDLYNKGLIYRGYRMVNWDPEAKTNISDEE 187


>gi|297208759|ref|ZP_06925187.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912849|ref|ZP_07130291.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304381874|ref|ZP_07364521.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|296886704|gb|EFH25609.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885953|gb|EFK81156.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304339660|gb|EFM05607.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320141608|gb|EFW33447.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 487

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 13  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 66

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 67  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 120

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 121 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 167

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 168 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMQISDVIRG 218

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 219 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 273

Query: 418 GS 419
           G 
Sbjct: 274 GY 275


>gi|19705307|ref|NP_602802.1| valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81485170|sp|Q8RHK3|SYV_FUSNN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19713276|gb|AAL94101.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 887

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEDGLKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L   G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 RKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 106/357 (29%), Gaps = 67/357 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +               +F+            + +       + +   
Sbjct: 394 WLENIRDWCISRQIWWGHRIPAWYGPDRHVFV-----------AMDEAEAKEQAKKHYGH 442

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    +             L   STM   +  + L            DL Y       G
Sbjct: 443 DVELSQEEDVLDTWFSS--ALWPFSTMGWPEKTKEL------------DLFYPTNTLVTG 488

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +I+   +           +      KK     +    +   RD +  KMSK  G+  
Sbjct: 489 AD-IIFFWVAR--------MIMFGMYELKKIPFKNVFFHGI--VRDEIGRKMSKSLGNSP 537

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               ++ E G D++RF M++   S+  D  F         N  F  +   A    I    
Sbjct: 538 DPLDLIKEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNATRFVIMNLK 594

Query: 469 KDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                 +D       ++ +   S  + +   +   L ++   ++NA  A         +Y
Sbjct: 595 GFDVKSVDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VY 643

Query: 527 D-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           + L   F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 644 EFLRGDFCDWY---VEIAKIRLYNDDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|319937669|ref|ZP_08012072.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807104|gb|EFW03718.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 445

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 101/319 (31%), Gaps = 46/319 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +V D L     + GY+VT      D   +I         +  +     + +L
Sbjct: 36  HIGNARPLIVFDILRRTFEYLGYKVTFVSNFTDVDDKI--------IKAAKEEGITEKEL 87

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            + Y         G  L                 P       + M  II           
Sbjct: 88  TDKYIKAYNDIRSGLNLL---------------FPTYSPRVTETMQPII---------DF 123

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ------LL 310
              + +  F       +   +  +   G +    +    +  +++ D + K+       L
Sbjct: 124 IQSLVDQGFAYEVDGDVYFRVTKINEYGMLSGIKVEDLIAGASERVDENDKKESSTDFAL 183

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-A 369
           ++ T  G   + P  K  G   +    +      ++   D  I + G          E  
Sbjct: 184 WKKTDEGIQFESPWSK--GRPGWHTECVVMINDIFD---DGRIDIHGGGQDLKFPHHENE 238

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +A +++     I  +      +  D    KMSK  G+ +  + +++ +G +  +++ML  
Sbjct: 239 IAQSMACHHHPIANVWMHNQMINID--NQKMSKSLGNVLWAKDLIETLGCNVFKWLMLST 296

Query: 430 KNSELLDFDFCKVKEQSKE 448
                L+F    +    KE
Sbjct: 297 HYRNPLNFTEEVLTSVKKE 315


>gi|260890419|ref|ZP_05901682.1| valine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860039|gb|EEX74539.1| valine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 881

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ +      I      +      +    +I     N TG +H+GH     + DT+   
Sbjct: 10  SPNEIEDKWYKIWEEKGYFNAQHNAEKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRY 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG++             ++   ++   + ++ L +  +   E  Y     +    E 
Sbjct: 70  KRMSGFDTL-------WIPGMDHAGIATQNKVERMLADEGTSKEEIGYDEFLRRT--WEW 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K+                          +I   L+ L +  D          G    +
Sbjct: 121 KEKHG------------------------GLITKQLRKLGVSLDWTRERFTMDEGLSEAV 156

Query: 274 RDIIDNLARQGYVYEGIL 291
           +++   L   G +Y G  
Sbjct: 157 KEVFIKLYNDGLIYRGEY 174


>gi|253581500|ref|ZP_04858725.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836570|gb|EES65105.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 886

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 76/272 (27%), Gaps = 40/272 (14%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   SP  +      I      +   +       +I     N TG +H+GH     + D
Sbjct: 4   LNKTYSPKEIESKWYKIWEDSKYFAGKMEEGKESYSIVIPPPNVTGILHMGHILNNSIQD 63

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       GY               +   ++   + ++ L   +  L +          
Sbjct: 64  TLVRYKRMCGYNTL-------WLPGCDHAGIATQNKVERKL--AEEGLKKEDLGRDKFIE 114

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              +  +K+                          II   L+ +    D          G
Sbjct: 115 ETWKWKEKHG------------------------GIITTQLRKIGASLDWDRERFTMDEG 150

Query: 269 DPSPIRDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
               +R+I  +L   G +Y+G                 +   +++   L+       D D
Sbjct: 151 LSKAVREIFVHLYNDGLIYQGEYMVNWCPRCGTALADDEVEHVEKDGHLWHVKYPVKDSD 210

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             ++ +        AD+A      +  + ++I
Sbjct: 211 EFIIIATSRPETMLADVAVAVHPEDDRYKHLI 242



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 84/231 (36%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+     +++
Sbjct: 486 VTGAD-IIFFWVARMIMFGL-YEMKEIPFKDVFFHGIVRDEIGRKMSKSLGNSPDPLNLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DE G+D++RF M++   S+  D  F +   +   N  F  +        I          
Sbjct: 544 DEFGADAIRFSMIY-NTSQGQDVHFSEKLLEMGRN--FANKIWNVARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           ++ +     ++ +   S  + +  ++  ++ ++   +++A  A         +Y+ L   
Sbjct: 601 VNKEELKLELVDKWIFSRMNETSKEVADYIDKFQ--LDDAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +               A      ++ SGL ++
Sbjct: 650 FCDWY---VELAKVRLYNDDEAGKA------SKVTAQYVLWTVLESGLRML 691


>gi|258422626|ref|ZP_05685532.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257847198|gb|EEV71206.1| glutamyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 484

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|298492495|ref|YP_003722672.1| valyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234413|gb|ADI65549.1| valyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 1006

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        Y  +   KG    +     N TG +H+GH   + + DTL       G
Sbjct: 18  EAKWQKFWEENQVYKPDPNHKGEPFCVVIPPPNVTGSLHIGHAFESALIDTLVRYHRMKG 77

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +                             L+   +D        +    +  E   ++ 
Sbjct: 78  HNT---------------------------LWVPGTDHASIAVQTILENQLKAEGKTRHD 110

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K+ S       I + L+ L +  D          G    + +   
Sbjct: 111 VGREKFLERAWQ--WKNESG----GTIVNQLRRLGVSVDWSRERFTLDEGLSKAVLEAFI 164

Query: 279 NLARQGYVYEG 289
            L  +G +Y  
Sbjct: 165 RLYEEGLIYRS 175


>gi|147675239|ref|YP_001216177.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262169981|ref|ZP_06037671.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|172047695|sp|A5F8Z3|SYI_VIBC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146317122|gb|ABQ21661.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012507|gb|ACP08717.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262021715|gb|EEY40426.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 949

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 17/171 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  + 
Sbjct: 565 YLEGSDQHRGWFQSSLISSVAMKSKAPYKEVLTHGFVV---DGQGRKMSKSIGNVVAPQD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R      
Sbjct: 622 VTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFL 669

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            +L+      ++IP E         +   LA    +I+ A      + +  
Sbjct: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQ-AYQDYNLHAVVQ 719


>gi|317486342|ref|ZP_07945172.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922412|gb|EFV43668.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 882

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 56/197 (28%), Gaps = 33/197 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +  +    G   +I     N TG +H+GH     + D L    
Sbjct: 12  PHAVEDHWREYWEKNKTFTPDPDAPGEPFSIVIPPPNVTGALHIGHALNHTLIDVLCR-- 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                        + ++ L+   +D        V  + + KE  
Sbjct: 70  -------------------------HARQKGKKVLWLPGTDHAGIATQNVVERALAKEGK 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++      F E  W    K+     ++  IR     L    D          G    +R
Sbjct: 105 TRHDLGREAFVERVWQ--WKEDYGNRILNQIR----MLGDSVDWTRERFTMDEGLSKAVR 158

Query: 275 DIIDNLARQGYVYEGIL 291
            +   L ++GY+Y+G  
Sbjct: 159 KVFVELYKEGYIYKGKY 175


>gi|310657778|ref|YP_003935499.1| methionyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824556|emb|CBH20594.1| methionyl-tRNA synthetase [Clostridium sticklandii]
          Length = 651

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 108/343 (31%), Gaps = 73/343 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D +A    F+G++V      ++ G +I            Q    
Sbjct: 15  PSGRLHIGHTYTTVAADAIARYKRFTGFDVRFLTGTDEHGEKI------------QKTAA 62

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR-DD 248
               +P+ Y  G    +K + + +   Y   +    E     + K +        I   +
Sbjct: 63  EKKMMPKDYLDGMIEDIKKLWETMEISYDDFIRTTDERHEKAVQKIFQKLYDKGDIYLGE 122

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYV-----YEGILPPPKSKTTQ 300
            +         +   D   G+     D    +       Y      Y+  L    +    
Sbjct: 123 YEGWYCIPCESLW-TDTQVGEEHLCPDCKREVQKKKESSYFFKLSKYQQPLVDYYNSHPD 181

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
            C  + ++    +  +   +D               DL+  +  ++ G    FD  ++IY
Sbjct: 182 FCFPESRKNEMLNNFINAGLD---------------DLSVSRTTFDWGIKVPFDDKHVIY 226

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----- 395
           V                 D S   K   A    V ++  + + ++   + +  D      
Sbjct: 227 VWIDALCNYITALGYLSEDESLMEKYWPANMQIVGKEIVRFHTIIWPALLMALDLPLPDK 286

Query: 396 ---------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ +    +++  G D++++ +L  
Sbjct: 287 VYGHGWILFSEDKMSKSKGNIVYPEPIIERYGIDALKYFLLKE 329


>gi|261378296|ref|ZP_05982869.1| isoleucine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145390|gb|EEZ71808.1| isoleucine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 930

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 435 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNTAE 494

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 495 LLEKVAQKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 544

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 545 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 599

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 600 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 654

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 655 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 701


>gi|253701290|ref|YP_003022479.1| valyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776140|gb|ACT18721.1| valyl-tRNA synthetase [Geobacter sp. M21]
          Length = 888

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 57/195 (29%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +   L       +I     N TG +H+GH     + D L    
Sbjct: 12  PKSVEERWYQQWEQKGYFHATLPSDKPGYSIVIPPPNITGVLHMGHALNNTLQDILCRWK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +GY V                           L+   +D        V  + +  E  
Sbjct: 72  RMAGYNV---------------------------LWMPGTDHAGIATQNVVERQLAAEGK 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++         E ++  V  +  ++  +II   LK L    D          G    +R
Sbjct: 105 DRF-----ELGREAFIERVWQWKGESGGQIIGQ-LKRLGASCDWERERFTMDAGLSKAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++   L ++  +Y  
Sbjct: 159 EVFVRLYQEKLIYRD 173


>gi|47458993|ref|YP_015855.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614378|sp|Q6KID2|SYV_MYCMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|47458321|gb|AAT27644.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 839

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 55/181 (30%), Gaps = 33/181 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             EY           +I     N TG +H+GH     + D L  L    GY+V      +
Sbjct: 20  KKEYFSTHDLTKKPFSILLPPPNVTGKLHIGHAWNTTLQDFLIRLKRLQGYDVLWLPGTD 79

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
            AG  I T A        Q ++ +D    E       L     +  ++Y++E        
Sbjct: 80  HAG--IATQAKVEKRLLDQKIFKSDLTKEE-------LFEKAMDWKNEYANE-------- 122

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                           I+     L +  D               + DI   L + GY+Y 
Sbjct: 123 ----------------IKKQWSKLGLALDYKKERFTLDELSNKAVNDIFVMLYKDGYIYR 166

Query: 289 G 289
           G
Sbjct: 167 G 167


>gi|15643482|ref|NP_228528.1| cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6831684|sp|Q9WZH8|SYC_THEMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4981244|gb|AAD35801.1|AE001743_3 cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 460

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 102/316 (32%), Gaps = 42/316 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +HVG+ R A+V D     + + GY V       D   +I   A  +              
Sbjct: 35  IHVGNARPALVFDVFRRYLEYRGYRVIMVQNFTDIDDKIINKANQL-------------- 80

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                  GV  K V      +Y  +                   A       D     ++
Sbjct: 81  -------GVDYKTVADTFIAEYWRDAHALGIR-----------PANFHPRTTDFVEDIVE 122

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
               + E  F     + +   +    + G + +  +    +    + D  +K  L  S  
Sbjct: 123 IIEKLVEKGFAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDETKKSPLDFSLW 182

Query: 316 VGDDVDRPLLKS---DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVA 371
                  P  KS   +G   +               FD  I+  G D    + +  +A A
Sbjct: 183 KKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFD--IHAGGEDLVFPHHENEKAQA 240

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            A++ K      +   +VR   D    KMSK  G+  T+R  V   G D +R+M+L +  
Sbjct: 241 EALTGKVFARYWMHNGMVRFLGD----KMSKSTGNIFTVREAVKRYGRDGLRYMILSKHY 296

Query: 432 SELLDFDFCKVKEQSK 447
              +DF    +++ S+
Sbjct: 297 RSPMDFSEELLQDYSR 312


>gi|312135165|ref|YP_004002503.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775216|gb|ADQ04703.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 920

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 25/182 (13%)

Query: 354 YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     A A   +     VL    V    DG   KMSK  G+ I+   
Sbjct: 558 YLEGNDQYRGWFQSSLLTAVATKGRAPYKIVLTHGFVV---DGEGKKMSKSEGNVISPFD 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++DE G+D +R   +    +  +      +K+ ++          Y + R+  R      
Sbjct: 615 IIDEFGADILRLWCVSADYTTDMRISKDIIKQLTEI---------YRKIRNTARFLLGNL 665

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS 530
            D +      + +  E+  +  +  L   L      +  A           Y  +Y L  
Sbjct: 666 FDFN---PKTDKVGYENLKEIDKWAL-QRLYTLIEKVTKAYEEY------DYNQVYHLVH 715

Query: 531 VF 532
            F
Sbjct: 716 NF 717


>gi|309791315|ref|ZP_07685838.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226625|gb|EFO80330.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 905

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 56/209 (26%), Gaps = 33/209 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L +       +            I     N TG +H+GH     + D +       G
Sbjct: 24  ERPLYTWWEQSGFFAPRPDAPKPPFVISIPPPNVTGELHLGHAMFVTIEDLMIRWRRMQG 83

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+       + AG    TL         + L  ++    E      +L+    E   KY 
Sbjct: 84  YQTLWVPGTDHAGIATQTLV--------EKLLRSEGTSREQVGREEFLRR-TWEWKAKYG 134

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E                        I++ L+ L    D          G    ++    
Sbjct: 135 GE------------------------IQNQLRRLGASCDWERERFTLDEGLSRSVQTAFK 170

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L   G +Y+G      S   Q    D +
Sbjct: 171 RLYDDGLIYKGTYLVNWSPNLQTAVSDLE 199


>gi|298693859|gb|ADI97081.1| glutamyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 484

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|297590583|ref|ZP_06949222.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576882|gb|EFH95597.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312439054|gb|ADQ78125.1| glutamate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 487

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 103/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 13  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 66

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++   
Sbjct: 67  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEA 120

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 121 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 167

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 168 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIRG 218

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 219 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 273

Query: 418 GS 419
           G 
Sbjct: 274 GY 275


>gi|125625093|ref|YP_001033576.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166226832|sp|A2RNK5|SYE_LACLM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|124493901|emb|CAL98895.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 483

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 123/349 (35%), Gaps = 59/349 (16%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  RE ++ D 
Sbjct: 2   NKKIRVRY-APSPTGLLHIGNARTALFNYLFARHHGGDFIIRI-----EDTDRERHVEDG 55

Query: 171 GA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP 225
              Q+  L      R+    ++   +  E Y        Y K++ + LA+  +      P
Sbjct: 56  ERSQLENL------RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYYSYKTP 109

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           EE      K  +       I +     + +   +I+E      +P  +R  +D       
Sbjct: 110 EELEADHAKQEAAGIPPHYINEYAGMSDDEKAAYIAERKAQNIEP-VVRISVDE------ 162

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                         +  D+ + ++ F    +G   D  + K DG  TY   + A     +
Sbjct: 163 ----------KAIYKWNDIVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDH 207

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    ++I   G DH     +   V  A+  +  Q       +  +       K+SKR  
Sbjct: 208 DMQISHVIR--GDDHIANTPKQLVVYNALGWEAPQFGH----MTLIINSETGKKLSKRDT 261

Query: 406 DFITLRHVVDEVG--SDSV-RFMMLWRKNS--ELLDFDFCKVKEQSKEN 449
           + +       + G  SD++  F+ L   N   E   F   ++ E   EN
Sbjct: 262 NTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSCEELIELFDEN 310


>gi|24375036|ref|NP_719079.1| isoleucyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81459913|sp|Q8EBI4|SYI_SHEON RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24349779|gb|AAN56523.1|AE015789_10 isoleucyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 940

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 113/338 (33%), Gaps = 41/338 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  +  +     L    + +W+P      ++ M++      I R     + I   +   
Sbjct: 425 FISMDNHNLRKQALSEIEQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRE 484

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            ++ H    S +  + + + ++G                  D+D  +LL         V 
Sbjct: 485 TEELHPDSVSLMARVANRIEQEG-------------IQAWWDLDAAELLGEEAEQYRKVT 531

Query: 322 RPL-LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
             L +  D   T FA+ +A     +  G D  +Y+ GSD   G+      ++ A++ K  
Sbjct: 532 DTLDVWYDSGST-FASVVAARPEFHGHGVD--LYLEGSDQHRGWFMSSLMISTAMTGKAP 588

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL         DG   KMSK  G+ I  + V +++G+D +R  +     S  +    
Sbjct: 589 YKQVLTHGF---TVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVS- 644

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++  +S +        AY R R+  R         D      +++  E          +
Sbjct: 645 DEILNRSAD--------AYRRIRNTARFLLANLNGFD---PKNDLVAVEDMVALDRWA-V 692

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
              A   + I  A      + +   L    S      +
Sbjct: 693 RRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFY 730


>gi|312879847|ref|ZP_07739647.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783138|gb|EFQ23536.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 829

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G+ +            +E     P+G +H+GH R   +GD LA  +   GY
Sbjct: 11  KWQRTWAEQGVFHVEKDGKGPKFYCLEMF-PYPSGALHMGHLRNYSIGDLLARFLRMQGY 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|298291906|ref|YP_003693845.1| valyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928417|gb|ADH89226.1| valyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 945

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 62/220 (28%), Gaps = 34/220 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +    V    +  GR          I     N TG +H+GH     + D 
Sbjct: 5   RFDPAAVEDRIYQAWVEAGAFKAGRPERVDAEPYCIVIPPPNVTGSLHMGHALNNTLQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 65  LCRFERMRGKDVLWQVGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++LA++          E ++  V  +  ++   II   LK L    D          G 
Sbjct: 94  ERQLAERQLPGRREMGREAFVERVWTWKEESGGTIINQ-LKKLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              +  +   L ++G +Y+           Q    D + L
Sbjct: 153 SRAVLKVFVRLYKEGLIYKDKRLVNWDPKFQSAISDLEVL 192



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 10/80 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +       +      L RD    KMSK  G+
Sbjct: 546 TGFD-IIFFW-------VARMMMMGLHFMDDVVPFKDVYIHA--LVRDEKGAKMSKSKGN 595

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    +V++ G+D++RF +
Sbjct: 596 VIDPLDLVEKYGADALRFTL 615


>gi|291458879|ref|ZP_06598269.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418133|gb|EFE91852.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 904

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 72/242 (29%), Gaps = 33/242 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +  + + G  +   +  K     I     N TG +H+GH     + D+L    
Sbjct: 10  PEEVEERIYEMWLKGGYFHAEVNPKKKPYTIMMPPPNITGQLHMGHALDNTLQDSLIRWK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYE              +  A++   R    L                         
Sbjct: 70  RMEGYEAL-------WQPGCDHAAIATEVRVTNELKARGI-------------------- 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK++     F +E W         +   K I + L  +    D          G    ++
Sbjct: 103 DKHALGREGFLKEAWS------WKEEYEKRIVNQLHKIGSSADWDRLRFTMDEGCSRAVQ 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
               +L R+GY+Y G          +    D + +          ++ P++  +G +   
Sbjct: 157 TAFLSLYRKGYIYRGSRIVNYCPHCRTSLSDAEVVHEEQDGFFWHINYPIVGEEGRFVEI 216

Query: 335 AA 336
           A 
Sbjct: 217 AT 218


>gi|257066730|ref|YP_003152986.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798610|gb|ACV29265.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 879

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 69/268 (25%), Gaps = 42/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+   K +      G  +   +        I     N TG +H+GH     + D +   
Sbjct: 6   NPNQFEKEIYEKWEKGGYFKAKVNPDKKPYTIVMPPPNVTGYLHLGHALNNTIQDIIIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G+                           +AL+   +D          +  +  E 
Sbjct: 66  KRMAGF---------------------------EALWIPGTDHASISTESKVVDKIYSEG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F EE W               I++ L+ + +  D               +
Sbjct: 99  KTKADLGREGFLEEAW------DWTNKYGGRIKEQLRTIGVSCDWDHDSFTMDENLTKAV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR--------KQLLFRSTMVGDDVDRPLL 325
           + +   +   G +Y G          +    D           L +      +D D  + 
Sbjct: 153 KRVFKKMYDDGLIYRGNRIVNWDPKAETAISDAEVYHEDQVGHLWYIKYFF-EDSDEYVT 211

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         DLA      +  F + I
Sbjct: 212 IATTRPETMLGDLAVAVNPEDPRFKDKI 239



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-EL 434
               ++         L RD    KMSK  G+ +    VV+E G+D++RF ++   +    
Sbjct: 497 YNTGKVPFHHVLFTGLIRDPQGRKMSKSLGNGVDPIDVVNEYGADALRFTLITGNSPGND 556

Query: 435 LDFDFCKVKEQSK 447
           + +D  ++     
Sbjct: 557 MRYDEKRILASRN 569


>gi|309389953|gb|ADO77833.1| glutamyl-tRNA synthetase; glutamate--tRNA(Gln) ligase
           [Halanaerobium praevalens DSM 2228]
          Length = 491

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 101/296 (34%), Gaps = 45/296 (15%)

Query: 130 ANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +PTG +H+G+ R A+          G+ +  +        T+E+           +   
Sbjct: 11  PSPTGKIHIGNMRTALFNWLVTKQKDGELVLRIEDTDQARSTKEF--------EEIIIQE 62

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           + W    A    D  +  G   G Y +    +L  +Y+ +LL           KD   Q 
Sbjct: 63  MEWLNLDA----DEGVGIGGDYGPYRQTERIDLYQEYADKLLEKGYAYKCYCTKDELDQM 118

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             K I +D           ++E +         +   +   R+  +      P K +   
Sbjct: 119 RQKAIDNDQMPRYDGSCRHLTESE---------QKAYEKEGRKPVLR--FKLPEKEREII 167

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ R  + F S+++ D +   + KSDG  TY   + A           ++I   G DH
Sbjct: 168 VQDLIRGDVSFNSSVLDDFI---IFKSDGMPTY---NFAVVIDDALMKISHVIR--GEDH 219

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                +   +  A+  +  +        + L  D    K+ KR  D + +    ++
Sbjct: 220 LSNTPKQILIYEALDFELPKFAH-----LPLILDENKAKLKKRGKDSVYIGEFREQ 270


>gi|15828961|ref|NP_326321.1| methionyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|14424467|sp|Q50319|SYM_MYCPU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14089904|emb|CAC13663.1| METHIONYL-TRNA SYNTHETASE (METHIONINE--TRNA LIGASE) (METRS)
           [Mycoplasma pulmonis]
          Length = 509

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 134/418 (32%), Gaps = 48/418 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-----WRYQ 186
           P+G +H+GH     +   L +     GYE       ++ G +I   A  +      +  +
Sbjct: 14  PSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQELKLETQDYVDR 73

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           QA    D           + +   KE  +          E+  + + K   + ++     
Sbjct: 74  QANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDKYVGLYSVSDEEF 133

Query: 247 DD----LKALNIQHD-------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                 LK  N           I I E+ +       I  I + L +     + I+   K
Sbjct: 134 LTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQDIISSKAIVNELK 193

Query: 296 S----KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA-----ADLAYFKCKYE 346
           S    K  +   + R +L +   +         +  D  + Y       +       K+ 
Sbjct: 194 SNFINKGLENLSVTRIKLDWGIKIDQSSKHVIYVWLDALFQYLTNLGYGSKNQSLYEKFW 253

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +  D  ++V+G +    + R   +   +  K   + +    +   +      KMSK  G+
Sbjct: 254 KNGDERVHVVGKE----ITRFHCIYWPIFLKSLNVKMPTKIISHGWIVTPEGKMSKSKGN 309

Query: 407 FITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKEN-----------PVFYV 454
            +    ++++ GS+ +++ ++ +    +   F    +      +            V  +
Sbjct: 310 VVDPVVLIEKYGSEVLKYFLIAKLSIKKDGVFSEELLVSAYNNDLVNTFSNLISRTVKMI 369

Query: 455 QYAYARCRS-IFRQAKDIFP---DLDFDLFPRNVIPQESEFD---TSELQLIVHLAEY 505
              Y R  S I  + ++      D+           +E EFD    S + L   L  Y
Sbjct: 370 LNNYDRPLSFILSKDQEDLEIEKDIKNSFETFCSFAEEYEFDKAFESTINLGKKLNLY 427


>gi|20094335|ref|NP_614182.1| isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74560178|sp|Q8TWY2|SYI_METKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19887391|gb|AAM02112.1| Isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 1080

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 64/174 (36%), Gaps = 15/174 (8%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           +L     L  +G   KMSK  G+ +    VV++ G+D++R+ +L        + F +  V
Sbjct: 615 VLMHGFTLDEEGR--KMSKSLGNVVDPMDVVEKYGADTLRWYVLRSNAPWRDMHFSWQDV 672

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           ++  +   V +  Y + +  S            +FD     +   E      +  L+  +
Sbjct: 673 RDTHRALNVLWNAYRFTKMYSELD---------EFDPEEHPLEDLEEHLKPEDRWLLSRI 723

Query: 503 AEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKL 555
                 + +A      ++ A  LY  +       +   R      +++ ++ + 
Sbjct: 724 NSLVEEVTDAFERYHVHEAARALYRFVTEDLSRWY--IRLVRERVWLEGDDPEK 775


>gi|300214744|gb|ADJ79160.1| Valyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 886

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +        +    +  N   +    +I     N TG +H+GH     + D +   
Sbjct: 12  DPSQVEPGRYKEWIEKGLFKPNEDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 72  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++  +    II      L +  D          G    +
Sbjct: 101 -AEDGISRYDLGREKFVEKVWEWKGEY-ADIIHQQWAKLGLSLDYDRERFTLDDGLSKAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L ++G +Y G          +    D
Sbjct: 159 RKVFVTLYKKGLIYRGEYIINWDPKARTALSD 190



 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 22/129 (17%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+       
Sbjct: 521 LIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYTKMDA----- 575

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
                  A+     I+  ++ +  +LD D+       + S  + SE QL     L+    
Sbjct: 576 -------AWNFINKIWNASRFVIMNLDSDV-------ELSLPEASEWQLADKWILSRLND 621

Query: 508 VIENATIAQ 516
            + + T   
Sbjct: 622 TVRDVTRLF 630


>gi|284929429|ref|YP_003421951.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809873|gb|ADB95570.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 482

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 109/314 (34%), Gaps = 52/314 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  ++ DT+ + + + GYEV                      +Y Q   + D  +
Sbjct: 37  HLGHARTCIIWDTVRNYLEWIGYEV----------------------KYVQNFTDVDDKI 74

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY-SVQAMMKIIRDDLKALNIQ 255
                     K   +E+++K+ +      E   +     Y  V  ++  I++ +  L   
Sbjct: 75  LSRAIKE---KTTMEEVSNKFINAYFEDMERLNVKKASVYPRVTHIIDDIQNLIGELEKS 131

Query: 256 HDIFISEDDFHR-----GDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              ++SE D +       D   +    +++L         +    K+K     D     +
Sbjct: 132 GHAYLSEGDVYFDIKSYKDYGKLSGRKLEDLKAGASGRVSLEDFQKNKKRDPADF---AV 188

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYV 364
             ++       D    K    +    +       K E G    ++V GSD     H   +
Sbjct: 189 WKKAKPTEKSWDSKWGKGRPGWHIECS----AMIKKELGETIDLHVGGSDLIFPHHENEI 244

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + EA+         +++        +  DG   KMSK  G+F T+R ++D+     VR 
Sbjct: 245 AQSEAITGK------ELSRYWSHNGMVKVDGE--KMSKSLGNFTTIRELLDQFEPMVVRL 296

Query: 425 MMLWRKNSELLDFD 438
            +L       LDF 
Sbjct: 297 FILQTHYRNPLDFS 310


>gi|302383256|ref|YP_003819079.1| glutamyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193884|gb|ADL01456.1| glutamyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 472

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 97/292 (33%), Gaps = 60/292 (20%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQ 173
             +   + +PTG +H+G  R A+          G  L  +      +  RE   +DA   
Sbjct: 8   QVVTRFAPSPTGYLHIGGARTALFNYLYAKGRGGKFLVRI-----EDTDRERSTDDA--- 59

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                        +A+++  S L          +H   +   +   +LL           
Sbjct: 60  ------------VKAIFDGLSWLELFADEEPVFQHARADRHREVVDQLLELG-----AAY 102

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +D++       +RD+ KA          E  +   +P      +D+L+R   V      P
Sbjct: 103 RDFTSAEETGRLRDEAKAARTTF-----ESPWRDREP-----TVDDLSRPHVVR--FRRP 150

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
              +      +  +          D  D  LL+SDG+ TY   +LA     ++ G  ++I
Sbjct: 151 LPGRVVVSDAVQGEVSW----GNEDLDDLVLLRSDGAPTY---NLAVVVDDHDMGVTHVI 203

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              G DH     R   +  A+   +          + L       K+SKR G
Sbjct: 204 R--GDDHLNNAARQSLIYDALGWPRPTFAH-----IPLIHGPDGAKLSKRHG 248


>gi|237742952|ref|ZP_04573433.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430600|gb|EEO40812.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 887

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 82/267 (30%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEDGLKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I  +L   G +Y+G            +    + D + K            D D  ++ 
Sbjct: 156 RKIFKDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATSRPETMLGDVAVAVHPEDERYKHLI 242



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 107/357 (29%), Gaps = 67/357 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +               +F+            + ++      + +   
Sbjct: 394 WLENIRDWCISRQIWWGHRIPAWYGPDRHVFV-----------AMDEVEAKEQAKKHYGH 442

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    +             L   STM   +  + L            DL Y       G
Sbjct: 443 DVELSQEEDVLDTWFSS--ALWPFSTMGWPEKTKEL------------DLFYPTSTLVTG 488

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
            D +I+   +           +      KK     +    +   RD +  KMSK  G+  
Sbjct: 489 AD-IIFFWVAR--------MIMFGMYELKKIPFKNVFFHGI--VRDEIGRKMSKSLGNSP 537

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
               ++ E G D++RF M++   S+  D  F         N  F  +   A    I    
Sbjct: 538 DPLDLIKEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLE 594

Query: 469 KDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                 +D       ++ +   S  + +   +   L ++   ++NA  A         +Y
Sbjct: 595 GFDVKSVDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VY 643

Query: 527 D-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           + L   F   +    E  ++R    +  K      ++    A      ++  GL ++
Sbjct: 644 EFLRGDFCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTVLEQGLRLL 691


>gi|224475632|ref|YP_002633238.1| methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420239|emb|CAL27053.1| Methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 667

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/376 (15%), Positives = 111/376 (29%), Gaps = 129/376 (34%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V                      RY   L  
Sbjct: 15  PSGKLHIGHAYSTVAGDVIARYKRMQGYDV----------------------RY---LTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D                G+++ +K     ++  E           +  M+  I+   + 
Sbjct: 50  TD--------------EHGQKIQEKAHKAGVSELE----------YLDEMISGIKSLWEK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS--KTTQKCDMDRKQL 309
           L I +D FI      +     +  + + L  QG +Y G      S    T   +   ++ 
Sbjct: 86  LEISNDDFI--RTTEKRHEEVVAKVFERLLEQGDIYLGEYEGWYSVPDETYYTESQLEEP 143

Query: 310 LFRSTM-------------------------VGDDVDRPLLKSDGSYTYF---------- 334
           ++                             +    DR L   D    +           
Sbjct: 144 VYDDNGKIIGGKSPDSGHEVELVKEESYFFNISKYADRLLAFYDEHPEFIQPPSRKNEMI 203

Query: 335 -------AADLAYFKCKYERG------FDNMIYVM--------------GSDHSGYVKRL 367
                    DLA  +  ++ G        +++YV                 D S + K  
Sbjct: 204 NNFIKPGLTDLAVSRTTFDWGVQVPSNPKHVVYVWIDALVNYISALGYLSEDDSLFKKYW 263

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHV 413
            A    ++++  + + ++  ++ +  D                  KMSK  G+ +    +
Sbjct: 264 PADLHLMAKEIVRFHSIVWPILLMALDLPLPKRVFAHGWILMKDGKMSKSKGNVVDPNVL 323

Query: 414 VDEVGSDSVRFMMLWR 429
           +D  G D+ R+ ++  
Sbjct: 324 IDRYGLDATRYYLMRE 339


>gi|167623065|ref|YP_001673359.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082332|sp|B0TJA9|SYI_SHEHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167353087|gb|ABZ75700.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 940

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 51/328 (15%)

Query: 223 NFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              + KW+P      ++ M++      I R     + I   +    ++ H    S +  +
Sbjct: 440 EIEQTKWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMERV 499

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------GS 330
              + +QG                  D+D       S ++GD+ D+    +D       S
Sbjct: 500 AARIEQQG-------------IQAWWDLDA------SELLGDEADQYRKVTDTLDVWYDS 540

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
            + F+  +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL     
Sbjct: 541 GSTFSTVVAARPEFH--GHDIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF- 597

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I+ +HV +++G+D +R  +     S  +     ++  +S + 
Sbjct: 598 --TVDGQGRKMSKSVGNVISPQHVTNKLGADILRLWVAATDYSGEMTVS-DQILNRSAD- 653

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  AY R R+  R         D  +     I      D     ++   A   + +
Sbjct: 654 -------AYRRIRNTARFLLANINGFDP-VSDMVAIEDMVALD---RWVVRRAAALQQEL 702

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHW 536
             A      + +   L    S      +
Sbjct: 703 LEAYDEYNFHLVTQKLMQFCSVELGSFY 730


>gi|282881584|ref|ZP_06290253.1| isoleucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304570|gb|EFA96661.1| isoleucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 1226

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 60/304 (19%), Positives = 111/304 (36%), Gaps = 45/304 (14%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +D         G        EL D+    +     
Sbjct: 574 LNDW-----NLSRSRFWGTPLPIWRDDE-------KGEKCIGSLAELYDEIEKSVAAGQM 621

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR---DIIDNLARQ 283
                  K +         +++   +++ H  ++ +      +  P+    D+ID     
Sbjct: 622 SSNPMKEKGFVPG---DFSKENYDKVDL-HRPYVDQIVLVNDEGKPMYRQSDLIDVWFDS 677

Query: 284 GYV-YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           G + Y  +  P + +      +   +     T+ G+D  + +++S+   T      A+F 
Sbjct: 678 GSMPYAQLHYPFEGEMASGLSLKNAEG---QTLTGEDARQAMVQSNYIGTPIPP--AFFP 732

Query: 343 CKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
             +       I   G D   G+   L A+A  V +  A  NV+   LV    D    KMS
Sbjct: 733 ADF-------INE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMS 781

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFY 453
           K  G+      +++  G+D+VRF M+   +  + L FD   V E  ++          F+
Sbjct: 782 KHLGNVKNPFDMIERYGADAVRFYMMTNSSPWDNLKFDEEGVDEVRRKFFGTLYNTYSFF 841

Query: 454 VQYA 457
             YA
Sbjct: 842 ALYA 845


>gi|163814866|ref|ZP_02206254.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
 gi|158449805|gb|EDP26800.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
          Length = 678

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 108/365 (29%), Gaps = 67/365 (18%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A    F+GY+V      ++ G +I   A   
Sbjct: 9   TTAIAYASGKP----HIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAFEN 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+     ++ E++   I K    Q  
Sbjct: 65  MQTPKEFVDETSGEIK-------RIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQG- 116

Query: 242 MKIIRDDLKALNIQHDIFISEDDF------------------------HRGDPSPIRDII 277
                D  K   +       E  F                        +    S  +D +
Sbjct: 117 -----DIYKGHYVGKYCTPCESFFTDGQLIDGKCPDCGRPVQEAKEEAYFFKMSKYQDKL 171

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGS 330
                Q   +                   + L    T          D      +  D  
Sbjct: 172 MKHIEQHPEFIQPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDAL 231

Query: 331 YTYFAADLAYFKC-KYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSEKKAQI 381
             Y    L Y    K +  F       ++++G D    H+ Y      +  A+     + 
Sbjct: 232 SNYITG-LGYDVDGKSDEKFYKYWPADLHLIGKDILRFHTIY---WPIMLMALGLPLPKQ 287

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFC 440
                 L++   DG   KMSK  G+ +    +VD  G D+VRF +L            + 
Sbjct: 288 VFGHPWLIQ--SDG---KMSKSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWE 342

Query: 441 KVKEQ 445
            + E+
Sbjct: 343 LMVER 347


>gi|149192164|ref|ZP_01870384.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834004|gb|EDL51021.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 942

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 40/304 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H      I  +   + 
Sbjct: 447 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNSLELIEKVAQLVE 506

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++G      + P +       + D  + +  +  V  D         G   Y   D    
Sbjct: 507 QKGIQAWWDVEPAELLGD---EADNYEKVLDTLDVWFDS--------GVTHYSVVDA--- 552

Query: 342 KCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
             + E   ++  +Y+ GSD   G+ +     + A+ ++     VL    V    DG   K
Sbjct: 553 --REEYNGNSADLYLEGSDQHRGWFQSSLITSIAMKDEAPYKQVLTHGFVV---DGHGRK 607

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY 
Sbjct: 608 MSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYR 658

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+  R       +L+      +++P +         +   LA    ++  A      +
Sbjct: 659 RIRNTAR---FFLANLNGFNPETDLVPADEMVALDRWAVGRALAAQEEIV-KAYGEYNTH 714

Query: 520 KLAF 523
            +  
Sbjct: 715 AVTQ 718


>gi|315032441|gb|EFT44373.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 677

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 24  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 74  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 121 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 177

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 178 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 235

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 236 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 295

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 296 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 346


>gi|227890482|ref|ZP_04008287.1| leucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849051|gb|EEJ59137.1| leucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 804

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 44/205 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         +LY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQKLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQEKIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
            ++ +L      Y   ++  T   E
Sbjct: 648 ENDGELDKV---YAETVKKVTEDFE 669


>gi|219684226|ref|ZP_03539170.1| valyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672215|gb|EED29268.1| valyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 875

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 65/223 (29%), Gaps = 40/223 (17%)

Query: 90  NLYL----SPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           N  L     P      + +  + + +    N + +   +       N TG +H+GH    
Sbjct: 2   NFRLLERYDPKAFEDEIYNKWLKNNVFLPNNSLFEKFSMVA--PPPNVTGVLHMGHALNF 59

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V+ D L        +     +  + AG        +VF R  + +  +  D         
Sbjct: 60  VLQDILVRYKRMKKHNTLWLFGTDHAG----IATQAVFERNLKKIGKSKDDFE----REE 111

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K +  +L DK+   ++N                         +K L   +D       
Sbjct: 112 LVKEI-FKLKDKHRGVIVNQ------------------------IKKLGASYDHSRERFT 146

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                   +  +  +L  +G +Y G         +     D +
Sbjct: 147 LDESLCKAVNKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|257468336|ref|ZP_05632430.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062610|ref|ZP_07927095.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688286|gb|EFS25121.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 886

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 76/272 (27%), Gaps = 40/272 (14%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   SP  +      I      +   +       +I     N TG +H+GH     + D
Sbjct: 4   LNKTYSPKEIESKWYKIWEDSKYFAGKMEEGKESYSIVIPPPNVTGILHMGHILNNSIQD 63

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       GY               +   ++   + ++ L   +  L +          
Sbjct: 64  TLVRYKRMCGYNTL-------WLPGCDHAGIATQNKVERKL--AEEGLKKEDLGREKFIE 114

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              +  +K+                          II   L+ +    D          G
Sbjct: 115 ETWKWKEKHG------------------------GIITTQLRKIGASLDWDRERFTMDEG 150

Query: 269 DPSPIRDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
               +R+I  +L   G +Y+G                 +   +++   L+       D D
Sbjct: 151 LSKAVREIFVHLYNDGLIYQGEYMVNWCPRCGTALADDEVEHVEKDGHLWHVKYPVKDSD 210

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             ++ +        AD+A      +  + ++I
Sbjct: 211 EFIIIATSRPETMLADVAVAVHPEDDRYKHLI 242



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 84/231 (36%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+     +++
Sbjct: 486 VTGAD-IIFFWVARMIMFGL-YEMKEIPFKDVFFHGIVRDELGRKMSKSLGNSPDPLNLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E G+D++RF M++   S+  D  F +   +   N  F  +        I          
Sbjct: 544 EEFGADAIRFSMIY-NTSQGQDVHFSEKLLEMGRN--FANKIWNVARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           ++ +     ++ +   S  + +  ++  ++ ++   +++A  A         +Y+ L   
Sbjct: 601 VNKEELKLELVDKWIFSRMNETSKEVADYIDKFQ--LDDAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +               A      ++ +GL ++
Sbjct: 650 FCDWY---VELAKVRLYNDDEAGKA------SKTTAQYVLWTVLEAGLRML 691


>gi|257125348|ref|YP_003163462.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049287|gb|ACV38471.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 881

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ +      I      +      +    +I     N TG +H+GH     + DT+   
Sbjct: 10  SPNEIEDKWYKIWEEKGYFNAQHNAEKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRY 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG++             ++   ++   + ++ L +  +   E  Y     +    E 
Sbjct: 70  KRMSGFDTL-------WIPGMDHAGIATQNKVERMLADEGTSKEEIGYDEFLRRT--WEW 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K+                          +I   L+ L +  D          G    +
Sbjct: 121 KEKHG------------------------GLITKQLRKLGVSLDWTRERFTMDEGLSEAV 156

Query: 274 RDIIDNLARQGYVYEGIL 291
           +++   L   G +Y G  
Sbjct: 157 KEVFIKLYNDGLIYRGEY 174


>gi|222100204|ref|YP_002534772.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782448|sp|B9K8X3|SYI_THENN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 918

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 89/270 (32%), Gaps = 41/270 (15%)

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           DP  I   +  + ++G            +     D    +   RS     D     + S 
Sbjct: 475 DPKVIEHFMKIVEKEG---TNAWFEKDVEELIPDDFRCPKCGARSFEKMLDTLDVWIDSG 531

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
            S+ Y          + +  F   +Y+ GSD   G+      +A A         VL   
Sbjct: 532 SSFEYITT-------REDHPFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHG 584

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            +   +D +  KMSK  G+ +    VV++ G++ +R  +        +      V++Q++
Sbjct: 585 FI---KDELGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYFNDIKISMRIVEQQTE 641

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                     Y + R+ FR       D D +L   + +P E      +  L         
Sbjct: 642 ---------VYKKIRNTFRFLLGNLEDFDPEL---DRVPYEKLLTIDKWAL----GRLQE 685

Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +I+ AT   +      Y       F   ++
Sbjct: 686 IIKRATEYYD-----SY------EFSKVYN 704


>gi|195977657|ref|YP_002122901.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974362|gb|ACG61888.1| methionyl-tRNA synthetase MetG [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 672

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 107/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A       Q  +  
Sbjct: 21  PSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQDKAQEAGLSPQAYVDG 80

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              ++             +++      +E+       LL   +        W  +  +++
Sbjct: 81  MAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIYLGTYSGWYSVSDEEF 140

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +  I  D     I           ++SE+ +          ++     Q    + 
Sbjct: 141 FTESQLAEIYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYADRLVAFFKAQPDFIQP 200

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 201 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 258

Query: 344 KYERGFD-----NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
           K    FD      + +++G D    + R  ++      +         L+     + +DG
Sbjct: 259 KDHANFDKFWSGRVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 314

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 315 ---KMSKSKGNVIYPEMLVERFGLDPLRYYLMR 344


>gi|145220307|ref|YP_001131016.1| glutamyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|238685560|sp|A4SGA5|SYE_PROVI RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|145206471|gb|ABP37514.1| glutamyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 521

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 113/307 (36%), Gaps = 43/307 (14%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
           +  G +V   F + +PTG +HVG  R A+          GD +  +      +  +   +
Sbjct: 18  MMVGKRVRTRF-APSPTGYLHVGGLRTALYNYLFAKRMDGDFVVRI-----EDTDQSRKV 71

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            DA      L  ++ W     L  ++S L  G   G YL+    ++  KY  +LL     
Sbjct: 72  ADAQ---ENLIKTLEWA---GLMPDESPL-HGGDFGPYLQSERLDIYKKYCEQLLEAG-H 123

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYV 286
            +        ++   ++     + L  +++  ++ ED       S I+  +D     G  
Sbjct: 124 AYHCFATSEELEENRQLQLK--QGLQPKYNRKWLPEDMGGSMPRSEIQKKLDE----GVP 177

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
               +  P   +    D+ R  + F S  +    D+ L+KSDG  TY     A     + 
Sbjct: 178 SVVRMKVPDYVSVWFEDIIRGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHL 231

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             F ++I   G +    + +   +   +  +  +        + L  +    K+SKR GD
Sbjct: 232 MEFTHIIR--GEEWLPSMPKHLLLYEFLGWEPPK-----YAHLPLLLNPDRSKLSKRQGD 284

Query: 407 FITLRHV 413
                ++
Sbjct: 285 VSVEDYI 291


>gi|323492574|ref|ZP_08097720.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313176|gb|EGA66294.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 942

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 107/324 (33%), Gaps = 40/324 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            V  + A   +  L +    +W+P      ++ M        I R     + I   +   
Sbjct: 427 FVSMDQAGLRAKALESIKNVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 486

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H      +  +   +  +G          +       + D+ + +  +  V  D  
Sbjct: 487 TAELHPNTIELVEKVAQLVEEKGI---QAWWDLEIADLLGEEADKYEKVLDTLDVWFDS- 542

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
                  G   Y   D      + E   ++  +Y+ GSD   G+ +     + A+ ++  
Sbjct: 543 -------GVTHYSVVDA-----REEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAP 590

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +    
Sbjct: 591 YKQVLTHGFVV---DGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS- 646

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ ++S +        AY R R+  R       +L       +++P E         + 
Sbjct: 647 DEILKRSAD--------AYRRIRNTAR---FFLANLSGFNPATDIVPAEEMVALDRWAVG 695

Query: 500 VHLAEYPRVIENATIAQEPYKLAF 523
             LA    ++  A      + +  
Sbjct: 696 RALAAQEEIV-KAYGEYNTHAVTQ 718


>gi|146298767|ref|YP_001193358.1| glutamyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|187470990|sp|A5FL73|SYE_FLAJO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|146153185|gb|ABQ04039.1| glutamyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 501

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 105/284 (36%), Gaps = 32/284 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-GAQINTLALSVFWRYQQ 187
           + +PTGP+H+G  R A+     A     +G    R   I D    +    A +      +
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAK--KHNGVFYLR---IEDTDQTRFVPGAEAYIMEALE 64

Query: 188 ALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMKI 244
            L  +  + + +    G Y +   K+L  KY+ +L+N     W     D   ++ A  K 
Sbjct: 65  WLGISPEETVGKNEKFGPYRQSDRKDLYQKYADQLIN---SGWAYYAFDTPEALDAHRKQ 121

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKC 302
              + K     ++    E    + D S +    +   R   G  Y      P  +T    
Sbjct: 122 HEAEGKTF--IYNHHNRE----KLDTSLVISAEETAKRIANGEHYVIRFKTPVDETLHLK 175

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F + ++    D+ L KSDG  TY    LA     +     ++I   G +   
Sbjct: 176 DIIRGDVKFETNLLD---DKVLFKSDGMPTYH---LANIVDDHLMETSHVIR--GEEWLP 227

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +     +  A      +    L  +++   +G   K+SKR GD
Sbjct: 228 SMPLHVLLYRAFGWDAPEFAH-LPLILKPVGNG---KLSKRDGD 267


>gi|82750235|ref|YP_415976.1| glutamyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|118595558|sp|Q2YSD3|SYE_STAAB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|82655766|emb|CAI80166.1| glutamyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 484

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 104/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               W       + D D   G Y     +H+ + L D+  +E   +   K     ++  V
Sbjct: 64  ---KWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAY---KCYMTEEELEV 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P+++T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|331083329|ref|ZP_08332442.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404410|gb|EGG83955.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 652

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 119/370 (32%), Gaps = 65/370 (17%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A  +G  H+G+   A++ D++A      GY+V  +   ++ G +I   
Sbjct: 1   MDKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ + N   ++         +  +     DK+     ++ E++   I K   
Sbjct: 61  AAEAGVSCKEFVDNVAGEIKS-------IWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q    I +   + +     + F +E     G              +       + P K 
Sbjct: 114 DQG--DIYKGYYEGMYCTPCESFFTESQLVDG--------------KCPDCGRPVTPAKE 157

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERG---- 348
           +          Q L        +  +P+ + +     F      DL   +  ++ G    
Sbjct: 158 EAYFFRMSKYAQRLIDHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVD 217

Query: 349 FD--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           FD  +++YV                 G +   + K   A    + +   + + +   +  
Sbjct: 218 FDPKHVVYVWLDALTNYITGIGYDCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFL 277

Query: 391 LYRD--------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELL 435
           +  D        G P       KMSK  G+ +    +VD  G D+VR+ +L         
Sbjct: 278 MALDLPLPKQIFGHPWLLQGDGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDG 337

Query: 436 DFDFCKVKEQ 445
              +  + E+
Sbjct: 338 VITWELMVER 347


>gi|262377098|ref|ZP_06070323.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307836|gb|EEY88974.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 948

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 97/285 (34%), Gaps = 37/285 (12%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             I R     + I   +    ++ H   P  I ++   + ++G   +G      S+    
Sbjct: 476 WCISRQRTWGVPIPFFVHKDTNELHPRTPELIEEVAKLIEQEGI--DGWYNRNASEFIG- 532

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D ++   +  +  V  D         G+  Y     A  + + E      +Y+ GSD  
Sbjct: 533 ADAEQYNAVRDTLDVWFDS--------GTTHY-----AVLREREELTDPADLYLEGSDQH 579

Query: 362 -GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+ +     + A++E+     +L    V    D    KMSK  G+ IT + ++ ++G+D
Sbjct: 580 RGWFQSSLLTSIAINERAPYKGLLTHGFVV---DEKGRKMSKSIGNVITPQDIIKDMGAD 636

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFD 478
            +RF +         +    K       +        Y R R+  R   A         D
Sbjct: 637 GLRFWIAS--ADYRYEMTAGKEIFSRASD-------GYRRIRNTLRFLLANLNGFKPSTD 687

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             P + +    ++      ++   +E    I+ A      + +  
Sbjct: 688 ALPVDQLIALDQY------ILQRASEVQETIKKAYEDMNFHIVTT 726


>gi|229823987|ref|ZP_04450056.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
 gi|229786341|gb|EEP22455.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
          Length = 880

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   +    +I     N TG +H+GH     + D +   
Sbjct: 10  NPQAIEAGKYEEWLERGVFKPSEDPEAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMIIRQ 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + ++ L             G+    +G+E 
Sbjct: 70  KRMQGFDTL-------WLPGMDHAGIATQAKVEEKLRG----------QGLSRYDLGRE- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E+ W         +     IR     + I  D          G    +
Sbjct: 112 ---------KFLEQTWA------WKEEYAGHIRQQWAKMGISVDYSRERFTLDEGLSEAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L  +  +Y G          +    D
Sbjct: 157 KKVFVTLYEKDLLYRGEYIINWDPAAKTSLSD 188


>gi|254459468|ref|ZP_05072884.1| glutamyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676057|gb|EDZ40544.1| glutamyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 469

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 66/425 (15%), Positives = 118/425 (27%), Gaps = 99/425 (23%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTL 177
            +   + +PTG +H+G  R A+     A       L+     +  R              
Sbjct: 5   IVTRFAPSPTGYLHIGGARTALFNWLYARGRGGKFLLRIEDTDRARSNP---------EA 55

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++         ++D D+   +        V  E+          F  +  +   ++ +
Sbjct: 56  TAAILQGMSWLGLDHDGDVISQFERADRHAEVAYEML-TAGKAFKCFATQDEIEAFREAA 114

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                                   +   +R   SP RD            +    P    
Sbjct: 115 RAE--------------------GKSTLYR---SPWRDA-----------DTSTHPDLPY 140

Query: 298 TTQKCDMDRKQLLFRSTMVGDDV-------DRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
             +    +   ++    + GD         D  LL+SDG+  Y    LA     ++ G  
Sbjct: 141 VVRVRAPEGGTMVISDEVQGDVKIGHDQLDDMILLRSDGTPVYM---LAVVVDDHDMGVT 197

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++I   G DH     R   V  A+        V +   + L       K+SKR G     
Sbjct: 198 HVIR--GDDHLSNAARQMMVYQAMGWD-----VPVFAHIPLIHGPDGKKLSKRHGALGAQ 250

Query: 411 R---------------------HVVDEVGSD--SVRFMMLWRKNSELLDFDFCKVKEQSK 447
                                 H  DE  SD  +  +  L         FD  K++    
Sbjct: 251 EYQLMGYPAAGMRNYLARLGWSHGDDEFFSDVQAKEWFDLSGIGKSPARFDSKKLEHLCG 310

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           ++       A +   ++  +  D       DL     I   S    S  +       +P 
Sbjct: 311 QH------IASSDNAALQNELLDFLAARGDDLLDDATIALLSAAMDSLKERAKT---FPE 361

Query: 508 VIENA 512
           ++E A
Sbjct: 362 LLEKA 366


>gi|197302731|ref|ZP_03167785.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
           29176]
 gi|197298313|gb|EDY32859.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
           29176]
          Length = 677

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 122/398 (30%), Gaps = 55/398 (13%)

Query: 108 SGIEYGR--NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
            GI + R   ++ +  K  I    A  +G  H+G+    V+ D +A      GY+V  + 
Sbjct: 35  DGIFFKRRQTIMSEKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQT 94

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
             ++ G +I   A       ++ +     ++         +  +     DK+        
Sbjct: 95  GTDEHGQKIELKAEEAGITPKEFVDKVSGEIK-------RIWDLMDTSYDKFIRTTDEDH 147

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD--------------- 269
           E++   I K    +    I +   + +     + F +E     G                
Sbjct: 148 EKQVKKIFKKLYDKG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPVQPAKEEA 205

Query: 270 -PSPIRDIIDNLARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGD 318
               +    D L      +   + P   K            Q   + R    +   +  D
Sbjct: 206 YFFKMSKYADRLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFD 265

Query: 319 DVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA- 372
                 +  D    Y    + Y  +      F+ +    ++++G D    + R   +   
Sbjct: 266 PKHVVYVWLDALTNYITG-IGYDAEGNSTEQFNKLWPADLHLIGKD----IIRFHTIYWP 320

Query: 373 --AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              ++        +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L   
Sbjct: 321 IFLMALDLPLPKQVFGHPWLLQGDG---KMSKSKGNVLYADELVDFFGVDAVRYFVLHEM 377

Query: 431 N-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                    +  + E+   +    +     R  S+  +
Sbjct: 378 PFENDGVISWELMVERLNSDLANTLGNLVNRTISMTNK 415


>gi|227891066|ref|ZP_04008871.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300900|ref|ZP_07207072.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|227867155|gb|EEJ74576.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851499|gb|EFK79211.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 886

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +        +    +  N   +    +I     N TG +H+GH     + D +   
Sbjct: 12  DPSQVEPGRYKEWIEKGLFKPNEDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 72  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++  +    II      L +  D          G    +
Sbjct: 101 -AEDGISRYDLGREKFVEKVWEWKGEY-ADIIHQQWAKLGLSLDYDRERFTLDDGLSKAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L ++G +Y G          +    D
Sbjct: 159 RKVFVTLYKKGLIYRGEYIINWDPKARTALSD 190



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 22/129 (17%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+       
Sbjct: 521 LIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYTKMDA----- 575

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
                  A+     I+  ++ +  +LD D+       + S  + SE QL     L+    
Sbjct: 576 -------AWNFINKIWNASRFVIMNLDSDV-------ELSLPEASEWQLADKWILSRLND 621

Query: 508 VIENATIAQ 516
            + + T   
Sbjct: 622 TVRDVTRLF 630


>gi|73748272|ref|YP_307511.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|90103541|sp|Q3ZZG9|SYV_DEHSC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|73659988|emb|CAI82595.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 880

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 56/191 (29%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K      +    +  N         I     N TG +H+GH   A + D +       G
Sbjct: 20  EKKWYQYWMEKSYFKPNPNSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQG 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                   ++ AG      A  V  R             E    G   + +G+EL  +  
Sbjct: 80  EPTLWLPGVDHAG----IAAQVVVER-------------ELAKQGKTRQQLGRELFLEKM 122

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E +N   EK                IR     L    D          G    +R+I  
Sbjct: 123 WEWVNPCREK----------------IRHQHMRLGASCDWDRETFTLDAGPVKAVREIFT 166

Query: 279 NLARQGYVYEG 289
           NL  +G +Y+G
Sbjct: 167 NLYEKGLIYKG 177


>gi|325955042|ref|YP_004238702.1| isoleucyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437660|gb|ADX68124.1| Isoleucyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 1135

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 116/360 (32%), Gaps = 61/360 (16%)

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL--- 249
           +D P  YYP             +    ++   +E  W P               +D    
Sbjct: 458 TDKPILYYP----LDSWFIKVTEVKDRMVELNKEINWKPKATGEGRFGNWLENVNDWNLS 513

Query: 250 --KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +   I   ++ +ED         + +++  + +   V      P K         +  
Sbjct: 514 RSRYWGIPLPVWRTEDGEEEIIIGSVEELVQEIEKSIAVGIQKENPFKDFEVGNMSEENY 573

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA----------YFKCKYERGFDNMIY--- 354
            L+     V D++   L+ + G      ADL           Y +  Y      +I    
Sbjct: 574 DLIDLHKNVVDEIT--LVSASGKPMKREADLIDVWFDSGAMPYAQVHYPFENKELIDNHT 631

Query: 355 -------VMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                    G D   G+   L A+A  V + KA  NV+   LV    D    KMSKR G+
Sbjct: 632 MYPADFIAEGVDQTRGWFYTLHAIATLVFDSKAYKNVMSNGLV---LDKNGQKMSKRLGN 688

Query: 407 FITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAY 458
            I     ++  G D+ R +M+   +  E L FD   V E  ++          F+  YA 
Sbjct: 689 AIDPFDTLETYGPDATRWYMIANAQPWENLKFDLAGVDEVRRKFFGTLYNTYSFFALYAN 748

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                 F  A+   P  + D   + ++ + +        LI  + E+           EP
Sbjct: 749 V---DGFTYAEKEIPVEERDELDQWILSELN-------TLIQQVDEF-------FSDYEP 791


>gi|289432321|ref|YP_003462194.1| valyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946041|gb|ADC73738.1| valyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 880

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 56/191 (29%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K      +    +  N         I     N TG +H+GH   A + D +       G
Sbjct: 20  EKKWYQYWMEKSYFKPNPNSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQG 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                   ++ AG      A  V  R             E    G   + +G+EL  +  
Sbjct: 80  EPTLWLPGVDHAG----IAAQVVVER-------------ELAKQGKTRQQLGRELFLEKM 122

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E +N   EK                IR     L    D          G    +R+I  
Sbjct: 123 WEWVNPCREK----------------IRHQHMRLGASCDWDRETFTLDAGPVKAVREIFT 166

Query: 279 NLARQGYVYEG 289
           NL  +G +Y+G
Sbjct: 167 NLYEKGLIYKG 177


>gi|156082730|ref|XP_001608849.1| methionyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796099|gb|EDO05281.1| methionyl-tRNA synthetase, putative [Babesia bovis]
          Length = 534

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 113/352 (32%), Gaps = 51/352 (14%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-------NTLALSVFWRY 185
            GP H+GH    V  D ++      G         ++ G ++           + +   Y
Sbjct: 39  NGPPHIGHTYEIVTSDIISRFFKVFGMVPILLSGTDEHGLKVATTAESYGMFPIELADYY 98

Query: 186 QQALYNNDSDL------------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               ++N++DL            P  Y     +  + ++  D Y        E      V
Sbjct: 99  SAKFHDNNTDLLTATHIFVRTTEPRHYKSAQKIWRILRDRGDIY------LGEYSGWYNV 152

Query: 234 KDYSVQAMMKIIRDDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-----QGYVY 287
           ++ +    ++    D K  L+ +    + E  +          +I+ L+      Q    
Sbjct: 153 REETFLTEVEAAATDYKDPLSGKPYTLMKESSYFFRMSKYQDMLIEKLSSDPAYLQPDSA 212

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              +     K  +   + R    +   +  D      + SD    Y +  + +       
Sbjct: 213 RAEILSRLKKPLEDLSVSRCNFKWGIPVPDDPSHVMYVWSDALTGYLSG-IGF------G 265

Query: 348 GFDNM---------IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
            FD++         + V+G D   +   +      +S +      +         DG   
Sbjct: 266 DFDDISQLKLWPPDLQVIGKDIIWFFAVIWTSI-LMSLEVPLPKTIFAHGFITAADGR-- 322

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKEN 449
           KMSK  G+ +  + ++D+ G D++R+ M+        + FD   + +    +
Sbjct: 323 KMSKSLGNVVNTKELLDKYGVDTLRYYMIRDSVFGSDVKFDLSSLADLHNSD 374


>gi|154499613|ref|ZP_02037651.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
 gi|150271691|gb|EDM98935.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
          Length = 656

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 108/329 (32%), Gaps = 46/329 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C V  D +A     +GY+V      ++ G +I   A       +Q + N
Sbjct: 16  PSDKLHIGHAYCTVATDVMARYKRLTGYDVMFLTGTDEHGQKIEDKAKDAGVTPKQYVDN 75

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               + EG    + L  +     D++     ++ E     I K    Q    I +   K 
Sbjct: 76  ----IVEGERGVLDLWKLMNISNDRFIRTTDDYHEAAVQKIFKQLYEQG--DIYKGTYKG 129

Query: 252 LNIQ-HDIFISEDDFHRGD-----------------------PSPIRDIIDN---LARQG 284
              +  + F +E     G                           I+D+++N   L  + 
Sbjct: 130 KYCKPCESFWTESQLVDGKCPDCGREVQDAEEEAYFFRLSKYADRIQDLLENTDFLEPRS 189

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            V E +    K      C               D      +  D    Y  A L Y   K
Sbjct: 190 RVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDF-DPGHVVYVWIDALSNYITA-LGYDNDK 247

Query: 345 YERGFDNM----IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y   +D      ++ +G +    +     A+  A++    +   +      L   G   K
Sbjct: 248 YN-DYDKFWPADVHFVGKEIVRFHSIIWPAILMALNLPLPKK--VFGHGWLLLDGG---K 301

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           MSK  G+ +    + +  G D++RF +L 
Sbjct: 302 MSKSKGNVVDPYLLSERYGVDALRFFLLR 330


>gi|90962047|ref|YP_535963.1| valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|90821241|gb|ABD99880.1| Valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 886

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +        +    +  N   +    +I     N TG +H+GH     + D +   
Sbjct: 12  DPSQVEPGRYKEWIEKGLFKPNEDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQ 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++             ++   ++   + +  L                        
Sbjct: 72  KRMQGFDTL-------WLPGMDHAGIATQAKVEARL------------------------ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK++  V ++  +    II      L +  D          G    +
Sbjct: 101 -AEDGISRYDLGREKFVEKVWEWKGEY-ADIIHQQWAKLGLSLDYDRERFTLDDGLSKAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R +   L ++G +Y G          +    D
Sbjct: 159 RKVFVTLYKKGLIYRGEYIINWDPKARTALSD 190



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 22/129 (17%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+D+ G+D++R+ +       + + F + K+       
Sbjct: 521 LIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSYTKMDA----- 575

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
                  A+     I+  ++ +  +LD D+       + S  + SE QL     L+    
Sbjct: 576 -------AWNFINKIWNASRFVIMNLDSDV-------ELSLPEASEWQLADKWILSRLND 621

Query: 508 VIENATIAQ 516
            + + T   
Sbjct: 622 TVRDVTRLF 630


>gi|58260762|ref|XP_567791.1| Glutamyl-tRNA synthetase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134117299|ref|XP_772876.1| hypothetical protein CNBK2470 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255494|gb|EAL18229.1| hypothetical protein CNBK2470 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229872|gb|AAW46274.1| Glutamyl-tRNA synthetase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 588

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 97/285 (34%), Gaps = 39/285 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R  Y   A   +++L  ++ 
Sbjct: 46  APSPTGHLHLGGLRTALFNHILARKWKGKWLLRIE--DTDRSRYTEGA---VDSLRNALE 100

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y +    ++   Y+ ELL+  E         +     +
Sbjct: 101 WAGLEY----DEGVGVGGSYGPYTQSERIDIYQHYTKELLSRDEAYEC-----FCSPTEL 151

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I+  L     +H        +         + +    R G  +         +     
Sbjct: 152 EAIKLSLAQQGFKH-------SYDGRCRHLTEEDVARRKRAGQKFVVRYKNAPGELDLPP 204

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM        + ++G D D  LLKSDG  TY    LA     +     +++   G +   
Sbjct: 205 DMIFGTHQ-PTAVIGPD-DFVLLKSDGWPTYH---LASVVDDHLMEITHVLR--GEEWLP 257

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            + +   +  A      Q        + L  +    K+SKR G+ 
Sbjct: 258 SIPKHHKLYRAFGWTPPQFAH-----LPLLCNPDGTKLSKRRGNT 297


>gi|313115499|ref|ZP_07800964.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622209|gb|EFQ05699.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 922

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 51/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +    + G  +            I     N TG +H+GH     + D L   
Sbjct: 30  DPSQVEDRIYQFWLDGGYFHTKADPDKKPYTIVMPPPNVTGQLHMGHAVDNTMQDILIRT 89

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          ++ +  E 
Sbjct: 90  KRMQGY---------------------------AALWVPGTDHASIATEAKVVEAMRAEG 122

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F +  W    K          I   LK L    D          G    +
Sbjct: 123 LTKEMVGRDGFLDRAWAWKTK------YGNRIVSQLKKLGSSCDWDRERFTMDEGCSEAV 176

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L  +G +Y G
Sbjct: 177 KEVFVRLYDKGLIYRG 192


>gi|302871850|ref|YP_003840486.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574709|gb|ADL42500.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 920

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 25/182 (13%)

Query: 354 YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     A A   +     VL    V    DG   KMSK  G+ I+   
Sbjct: 558 YLEGNDQYRGWFQSSLLTAVATKGRAPYKIVLTHGFVV---DGEGKKMSKSEGNVISPFD 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++DE G+D +R   +    +  +      +K+ ++          Y + R+  R      
Sbjct: 615 IIDEFGADILRLWCVSADYTTDMRISKDIIKQLTEI---------YRKIRNTARFLLGNL 665

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS 530
            D +      + +  E+  +  +  L   L      +  A           Y  +Y L  
Sbjct: 666 YDFN---PKTDKVGYENLKEIDKWAL-QRLYTLIEKVTKAYEEY------DYNQVYHLVH 715

Query: 531 VF 532
            F
Sbjct: 716 NF 717


>gi|258614579|ref|ZP_05712349.1| methionyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 413

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 115/331 (34%), Gaps = 42/331 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I T A  +  + Q+ +  
Sbjct: 16  PSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIETKAEELGVKPQEYVDK 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIVKD-- 235
             +D+ +           +++      K    K    LL   +      E W  +  +  
Sbjct: 76  MAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYSVSDEEF 135

Query: 236 YSVQAMMKIIRDDL------KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
           ++   + ++ +DD       KA +      + E+ +          +++         + 
Sbjct: 136 FTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYADRLLEYYEEHPEFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 196 ESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDALSNYITA-LGYGSE 254

Query: 344 ---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
               +E+ +   + ++G +    + R   +      ++        +      L +DG  
Sbjct: 255 DESLFEKYWPADVQMVGKE----IVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG-- 308

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 309 -KMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 467

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 127/431 (29%), Gaps = 101/431 (23%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  ++ DTL   + + GY+VT   Y+                  Q 
Sbjct: 29  CGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVT---YV------------------QN 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +D  +   +  G+  + V  +   +Y  +            +K  +V   +     
Sbjct: 68  FTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLG-------IKRATVHPQVTD--- 117

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGILPPPKSK 297
                                +   I + I  L  +GY Y                 K  
Sbjct: 118 ---------------------NIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLS 156

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAA----DLAYFK---CKYERG 348
             ++ D++    +  +      +D  L   K +G   + +        +        +R 
Sbjct: 157 GQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRY 216

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I +            E   A    +  +I      +   Y +    KMSK  G+F 
Sbjct: 217 LGETIDIHAGGQDLTFPHHENEIAQSEARSGKIFSKYW-MHNGYININDEKMSKSKGNFF 275

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VRF ML       ++F   ++  Q+K                   + 
Sbjct: 276 TVRDISKLYDLEIVRFFMLSAHYRNPVNFS-DEMLNQAKAG---------------LERL 319

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAF 523
            +    L+F L        ES     E++L+  L ++ +   +A             +  
Sbjct: 320 YNTKEKLEFTLSNL----VESPLTEKEVELVKELDDFRQKFIDAMDDDVNTADAVSVI-- 373

Query: 524 YLYDLASVFHG 534
             ++LA + + 
Sbjct: 374 --FELAKLINS 382


>gi|257415492|ref|ZP_05592486.1| methionyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157320|gb|EEU87280.1| methionyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 669

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 66  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQRI----FDR 112

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 113 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 170 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 227

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 228 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 288 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|146279122|ref|YP_001169281.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|229470627|sp|A4WX62|SYE2_RHOS5 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|145557363|gb|ABP71976.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 471

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 125/415 (30%), Gaps = 73/415 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +   + +PTG +H+G  R A+     A                   G +  T  L 
Sbjct: 6   EKPVVTRFAPSPTGYLHIGGARTALFNWLFAR------------------GRK-GTFLLR 46

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++      +D        + L   G+ ++     +       + L     Y   +
Sbjct: 47  IEDTDRERSTPEATDAILRGLTWLGLDWDGEVVSQFARKDRHAEVAREMLARGAAYKCFS 106

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               I    +A   +    +    +   DPS   D           Y   +  P++  T 
Sbjct: 107 TQDEIEAFREAARAEGRSTLFRSPWREADPSTHPDA---------PYVIRMKAPRTGETV 157

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  + F++  +    D  +L+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 158 IADRVQGTVRFQNETLD---DMVVLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 209

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------I 408
                R   V  A+  +     V +   + L       K+SKR G               
Sbjct: 210 LNNAARQTMVYEAMGWE-----VPIWAHIPLIHGPDGKKLSKRHGALGVEEYQAMGYPAA 264

Query: 409 TLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            +R+ +  +G             ++ +  L          DF K++    ++       A
Sbjct: 265 GMRNYLTRLGWAHGDDEFFTSEQAMAWFDLEGIGRSPARLDFKKLENVCGQHIAVMDDAA 324

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                       +I   L     P     Q      +   L      +P ++E A
Sbjct: 325 AMH---------EIQAYLAAARKPALTDLQAGRLSAALYALKDRAKTFPELLEKA 370


>gi|320530417|ref|ZP_08031475.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137250|gb|EFW29174.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 887

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+   +   +       + +         ++     N TG +H+GH     + D L   
Sbjct: 14  DPASFERKWYAYWEDHGFFHQEADESREPYSVVIPPPNVTGQLHMGHALDNTLQDILVR- 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                          YQ+    N   +P   + G+  +   +E 
Sbjct: 73  -------------------------------YQRMRGKNVIWVPGCDHAGIATQAKVEES 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                +   +   EK+L  V  +  Q   +I+   L+ L    D          G    +
Sbjct: 102 LRAEGTTRFDLGREKFLERVWAWKEQYGDRIMYQ-LRMLGSSCDWARERFTMDGGCSRAV 160

Query: 274 RDIIDNLARQGYVYEGI 290
           R+   +L  QG +Y+G 
Sbjct: 161 REAFVSLYEQGLIYQGT 177



 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 46/256 (17%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E WL  ++D+ +   +         +   H     E    R D +               
Sbjct: 397 ENWLENIRDWCISRQLWWG----HRIPAWHCDDCGETSVSREDLTACAHC---------- 442

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             G     + +             F +    DD        D  + Y  A L        
Sbjct: 443 --GSTKIRQDEDVLDTWFSSGLWPFETMGWPDDT------KDLRHFYPTAALVT------ 488

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +           +V +  LV   RD    KMSK  G+
Sbjct: 489 -GYD-IIFFW-------VARMVMMGLRFGGDVPFRDVFIHGLV---RDSEGRKMSKSLGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVFYVQYAYAR 460
            I    V+++ G+D++RFM++        + F + +V+          N   Y+   +  
Sbjct: 537 GIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARNFANKIWNASRYMLMNFEG 596

Query: 461 CRSIFRQAKDIFPDLD 476
             + F  A + +   D
Sbjct: 597 ADTSFVPAAEDYTLAD 612


>gi|313894948|ref|ZP_07828507.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976401|gb|EFR41857.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 887

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+   +   +       + +         ++     N TG +H+GH     + D L   
Sbjct: 14  DPASFERKWYAYWEDHGFFHQEADESREPYSVVIPPPNVTGQLHMGHALDNTLQDILVR- 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                          YQ+    N   +P   + G+  +   +E 
Sbjct: 73  -------------------------------YQRMRGKNVIWVPGCDHAGIATQAKVEES 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                +   +   EK+L  V  +  Q   +I+   L+ L    D          G    +
Sbjct: 102 LRAEGTTRFDLGREKFLERVWAWKEQYGDRIMYQ-LRMLGSSCDWARERFTMDGGCSRAV 160

Query: 274 RDIIDNLARQGYVYEGI 290
           R+   +L  QG +Y+G 
Sbjct: 161 REAFVSLYEQGLIYQGT 177



 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 81/256 (31%), Gaps = 46/256 (17%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E WL  ++D+ +   +         +   H     E    R D +               
Sbjct: 397 ENWLENIRDWCISRQLWWG----HRIPAWHCDDCGETSVSREDLTACAHC---------- 442

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             G     + +             F +    DD        D  + Y  A L        
Sbjct: 443 --GSTKIRQDEDVLDTWFSSGLWPFETMGWPDDT------KDLRHFYPTAALVT------ 488

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +           ++ +  LV   RD    KMSK  G+
Sbjct: 489 -GYD-IIFFW-------VARMVMMGLRFGGDVPFRDIFIHGLV---RDSEGRKMSKSLGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVFYVQYAYAR 460
            I    V+++ G+D++RFM++        + F + +V+          N   Y+   +  
Sbjct: 537 GIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARNFANKIWNASRYMLMNFEG 596

Query: 461 CRSIFRQAKDIFPDLD 476
             + F  A + +   D
Sbjct: 597 ADTSFVPAAEDYTLAD 612


>gi|300854525|ref|YP_003779509.1| glutamyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300434640|gb|ADK14407.1| glutamyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 480

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 117/323 (36%), Gaps = 37/323 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A     +G +        D    +      ++   +  
Sbjct: 9   APSPTGYMHVGNLRTALYTYLIA---KHAGGDFILRIEDTDQERFVEGALNVIYDTLKAT 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D     G   G Y++    ++  KY+ EL+   E  +        + ++     D 
Sbjct: 66  GLKHDEGPDIGGPVGPYVQSQRTDIYLKYAKELIEKGE-AYYCFCTKERLDSLRNNS-DT 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K    +H + +S+++  +   S I  +I                P+   T   D     
Sbjct: 124 YK--YDKHCLHLSKEEIEKNLSSGIPYVIRQ------------NNPEVGVTSFNDEIYGN 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS++     +  
Sbjct: 170 I---SVDNSELDDMILIKSDGYPTY---NFANVIDDHLMGITHV--VRGSEYLSSAPKYN 221

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVRFMM 426
            +  A   +     + +             K+SKR GD  +   ++++  +    + ++ 
Sbjct: 222 RLYEAFGWE-----IPIYVHCPPIMKDEHNKLSKRNGDA-SFEDLIEKGYLKEAVLNYIA 275

Query: 427 L--WRKNSELLDFDFCKVKEQSK 447
           L  W   SE   F+  ++ ++  
Sbjct: 276 LLGWNPRSEQEIFNLEELVKEFD 298


>gi|269966608|ref|ZP_06180689.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828793|gb|EEZ83046.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 942

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+ ++     VL    V    DG   KMSK  G+ +  +
Sbjct: 563 LYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGQGRKMSKSIGNVVAPK 619

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 620 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTARFFLAN 670

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               + +    +++P E         +   LA    ++  A      + +  
Sbjct: 671 LSGFNPE---TDIVPVEEMVALDRWAVGRALAAQEEIV-KAYEEYNTHGVTQ 718


>gi|305680899|ref|ZP_07403706.1| valine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659104|gb|EFM48604.1| valine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 882

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 73/241 (30%), Gaps = 41/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   L    V    +  ++       +I     N TG +H+GH     + D +A  
Sbjct: 15  DPATVESALYQEWVDRGYFTADVNSLKPAFSIVLPPPNVTGQLHMGHALDHTLMDAIARR 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++   +                        V   L
Sbjct: 75  KRMQGYEVL-------WLPGMDHAGIATQSK------------------------VEARL 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +       ++  E+++  V ++  +     I + ++A+    D          G    +
Sbjct: 104 KETEGKTRWDYSREEFIAKVWEWK-REFGGTIGEQMRAIGDSVDWSRERFTLDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L  +G +Y        S   +           D+D + +  R   + DD    +
Sbjct: 163 QTIFKQLYDRGLIYRAHRLINWSPVLETAVSDIEVVYKDVDGELVSIRYGSLDDDQPHVV 222

Query: 325 L 325
           +
Sbjct: 223 V 223


>gi|298530509|ref|ZP_07017911.1| valyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509883|gb|EFI33787.1| valyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 884

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K           +  +    G   +I     N TG +H+GH     + D L       G
Sbjct: 15  EKKWIDYWNDNQSFTPSDEPGGKSYSIVIPPPNVTGTLHMGHALNLTLQDILCRYHRQQG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V                           L+   +D        V  K +  +      
Sbjct: 75  YDV---------------------------LWVPGTDHAGIATQNVVEKSLAAQ-----G 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           +   +   E+++  V  +  +   KI+   +  +    D          G    +R++  
Sbjct: 103 TTRQDLGREEFVRQVWQWKEEYGGKILNQ-ISRIGASVDWSRLRFTMDDGLSRAVREVFV 161

Query: 279 NLARQGYVYEG 289
            L  QG +Y+G
Sbjct: 162 KLYEQGLIYQG 172


>gi|282877227|ref|ZP_06286065.1| isoleucine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300719|gb|EFA93050.1| isoleucine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 1223

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/307 (20%), Positives = 112/307 (36%), Gaps = 51/307 (16%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +++        G        EL D+    +     
Sbjct: 574 LNDW-----NLSRSRFWGTPLPIWRDEN-------KGEKCIGSLAELYDELEKSVAAGYM 621

Query: 227 EKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISE--DDFHRGDPSPIRDIIDNLAR 282
           +      + +     +     + DL    + + + ++E  D  +R       D+ID    
Sbjct: 622 KSNPLKDQGFIPGDYSQANYDKIDLHRPYVDNIVLVNEQGDPMYRES-----DLIDVWFD 676

Query: 283 QGYV-YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL--A 339
            G + Y     P +    +   M   Q      + G+D  + +++S    TY    +  A
Sbjct: 677 SGSMPYAQQHYPFEGDMAEGKTMRDAQ---DRVVTGEDARKAMVES----TYHGTPIPPA 729

Query: 340 YFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           +F   +       I   G D   G+   L A+A  V +  A  NV+   LV    D    
Sbjct: 730 FFPADF-------INE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGN 778

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NP 450
           KMSK  G+      ++++ G+D+VRF M+      + L FD   V E  ++         
Sbjct: 779 KMSKHLGNVKNPFDMIEKYGADAVRFYMMTNSAPWDNLKFDEEGVDEVRRKFFGTLYNTY 838

Query: 451 VFYVQYA 457
            F+  YA
Sbjct: 839 SFFALYA 845


>gi|227517850|ref|ZP_03947899.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555041|ref|ZP_03985088.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229546775|ref|ZP_04435500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548866|ref|ZP_04437591.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|293383808|ref|ZP_06629715.1| methionine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388716|ref|ZP_06633209.1| methionine--tRNA ligase [Enterococcus faecalis S613]
 gi|307268005|ref|ZP_07549393.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307271930|ref|ZP_07553198.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307275347|ref|ZP_07556490.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307278375|ref|ZP_07559450.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307290946|ref|ZP_07570836.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901528|ref|ZP_07760801.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312904490|ref|ZP_07763649.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312906976|ref|ZP_07765972.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312952803|ref|ZP_07771665.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312978767|ref|ZP_07790494.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|227074693|gb|EEI12656.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227175828|gb|EEI56800.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229305887|gb|EEN71883.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229308124|gb|EEN74111.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|291078884|gb|EFE16248.1| methionine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081873|gb|EFE18836.1| methionine--tRNA ligase [Enterococcus faecalis S613]
 gi|306498016|gb|EFM67543.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306504881|gb|EFM74076.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507981|gb|EFM77108.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306511436|gb|EFM80438.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515646|gb|EFM84173.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310626961|gb|EFQ10244.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629319|gb|EFQ12602.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310632188|gb|EFQ15471.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311288474|gb|EFQ67030.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291323|gb|EFQ69879.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315029800|gb|EFT41732.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315034325|gb|EFT46257.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315145783|gb|EFT89799.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315149690|gb|EFT93706.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153002|gb|EFT97018.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155233|gb|EFT99249.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315157560|gb|EFU01577.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315163011|gb|EFU07028.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315167934|gb|EFU11951.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315172032|gb|EFU16049.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173438|gb|EFU17455.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574157|gb|EFU86348.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315577288|gb|EFU89479.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315581700|gb|EFU93891.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327534510|gb|AEA93344.1| methionine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329574121|gb|EGG55698.1| methionine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 677

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 24  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 74  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 121 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 177

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 178 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 235

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 236 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 295

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 296 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 346


>gi|239628933|ref|ZP_04671964.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519079|gb|EEQ58945.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 674

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 133/422 (31%), Gaps = 66/422 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      GY+V  +   ++ G +I   A + 
Sbjct: 12  TTAIAYASGKP----HIGNTYEIVLADSIARYKREQGYDVFFQTGTDEHGQKIEEKAQAA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +    +++         +  +     DK+        E +   I K    Q  
Sbjct: 68  GVTPKEFVDKAAAEI-------RRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYDQG- 119

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I +   + L     + F +E     G        +     + Y +      P+     
Sbjct: 120 -DIYKGYYEGLYCTPCESFFTESQLVDGKCPDCGREVKPAKEEAYFFRMSKYAPRLIEHI 178

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
               +  Q + R   + ++   P             DL   +  +  G    FD  ++ Y
Sbjct: 179 NQHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTTFSWGIPVDFDPKHVTY 228

Query: 355 VM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---- 394
           V                 GS    + K   A    + +   + + +   +  +  D    
Sbjct: 229 VWLDALTNYITGIGYDCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLP 288

Query: 395 ----GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
               G P       KMSK  G+ +    +VD  G D+VR+ +L            +  + 
Sbjct: 289 KQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMV 348

Query: 444 EQSKENPVFYVQYAYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           E+   +    +     R  S+  +       D     + D   + V+ +E +   ++++ 
Sbjct: 349 ERMNSDLANILGNLVNRTISMSNKYFDGVIADKGAAGEVDEDLKKVVLEEVKKADAKMEQ 408

Query: 499 IV 500
           + 
Sbjct: 409 LR 410


>gi|148240776|ref|YP_001226163.1| valyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147849315|emb|CAK24866.1| Valyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 914

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 107/371 (28%), Gaps = 52/371 (14%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +    +   F  E+W  + +D+        I   L     +   +    +          
Sbjct: 373 EALEKQDPRFIPERWEKVYRDWLTDIRDWCISRQLW-WGHRIPAWFVISETGGNYTDTTP 431

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++     +    E       +    + D D     F S +             G     
Sbjct: 432 YVVARNEAEAL--EKAKAEYGAAAEIEQDEDVLDTWFSSGLWPFSTL-------GWPDAD 482

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           +ADL   Y       GFD +I+         V R+  +A A + +    +V +  LV   
Sbjct: 483 SADLQRWYPTNTLVTGFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV--- 531

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK AG+ I    ++D  G+D++RF ++        D      ++      V 
Sbjct: 532 RDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKTDTSATVE 591

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
             +    +  +  R A                  Q  + D + LQL     L+   RV  
Sbjct: 592 ASRNFANKLWNATRFALMN--------LGGETPAQLGDPDPAALQLADRWILSRLARVNR 643

Query: 511 NATIAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                        Y        LY+ A +     +    +         +   L   R+ 
Sbjct: 644 ETAERYS-----SYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVA 698

Query: 562 LVHAVASIINS 572
                  ++  
Sbjct: 699 -----KQVLAK 704



 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 52/193 (26%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   ++     N TG +H+GH     + DT+      +G
Sbjct: 14  EARWQQAWEDQGAFHPDPKAPGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++   +  
Sbjct: 74  KNVLC--------------------------------LPGTDHASIAVQTILEKQLKEEG 101

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L     +  ++  + I   L+ L    D          G    +++   
Sbjct: 102 KTRHDLGREAFLERAWQWKAESGGR-IVGQLRRLGYSVDWQRQRFTLDEGLSEAVKEAFV 160

Query: 279 NLARQGYVYEGIL 291
            L  QG +  G  
Sbjct: 161 RLHEQGLIVRGEY 173


>gi|94496391|ref|ZP_01302968.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424137|gb|EAT09161.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 520

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 122/425 (28%), Gaps = 63/425 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-----FWRYQ 186
           P G  H+GH    +  D +A      G +V  +   ++ G ++   A +          +
Sbjct: 14  PNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARARGIEPRALADE 73

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            A Y    +         +++    +      +          L + +     ++     
Sbjct: 74  MAGYFKVMNEALNISHDRFIRTSEPDHHRASQAIWRAMEANGDLYLGRYEGWYSVRDEAF 133

Query: 247 DDLKAL------------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            D K L            N   +  + E  F R          D L          + P 
Sbjct: 134 YDEKELIEGEGGAKLSPQNTPVEWTVEESWFFRLSAYQ-----DKLLALYESQPDFIQPE 188

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF-------------AADLAYF 341
             +      ++        +    D    +  +DG   Y                D A  
Sbjct: 189 SRRNEIMRFVEGGLSDLSISRTSFDWGVRVPDADGHVMYVWVDALTNYLTGCGYPDDAER 248

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPI 398
             +Y     ++ +V+G D    + R  AV   A  +S K      +      L R     
Sbjct: 249 MARYWAEGGDITHVIGKD----IVRFHAVYWPAFLMSAKLPLPKQIFGHGFLLNRG---E 301

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA- 457
           KMSK  G+      + D  G D +R+ +L                E +  N   Y   A 
Sbjct: 302 KMSKSLGNVADPMELADRFGVDQLRYFLLS---------------EVTFGNDGSYSAEAI 346

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--QLIVHLAEYPRVIENATIA 515
            AR  S    +             +N+  +  E    E+   L+  +A+  R+ +NA   
Sbjct: 347 IARSNSDLANSFGNLAQRTLSFIAKNLDGRLPEPAAMEVDSALLSGIADACRIFQNAMND 406

Query: 516 QEPYK 520
             P  
Sbjct: 407 LAPSV 411


>gi|77462536|ref|YP_352040.1| valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|90108434|sp|Q3J4Z5|SYV_RHOS4 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77386954|gb|ABA78139.1| Putative valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 987

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 60/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     ++  +   +G         +     I     N TG +H+GH     + D L   
Sbjct: 9   AAEAEARLYDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG     +                               V +EL
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQMV-------------------------------VEREL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A            E +L  V ++  Q+    I + LK L    D   +           +
Sbjct: 98  AKSGQPGRREMGREAFLEKVWEWKEQSG-GTIVNQLKRLGASCDWSRNAFTMDPNFQRAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G++Y G          +    D +
Sbjct: 157 LKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLE 190



 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +     V +  LV   RD    KMSK  G+
Sbjct: 593 TGFD-IIFFW-------VARMMMMQLAVVNEVPFKTVYVHALV---RDEKGKKMSKSLGN 641

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 642 VLDPLELIDEFGADAVRFTL 661


>gi|295694813|ref|YP_003588051.1| glutamyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410415|gb|ADG04907.1| glutamyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 491

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 96/297 (32%), Gaps = 40/297 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +RE     AGA+   +  ++ 
Sbjct: 8   APSPTGHLHIGGARTALFNWLFARQKGGQMVLRIEDTDRSREV----AGAE-EKMVDALR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G   G Y      E  D Y S      EE        Y     +
Sbjct: 63  WLGLDWDEGPD----IGGKFGPYR---SMERLDLYRSLANRLLEEGRAYPC--YCTPEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R++++   +              +          LA +G  +      P+ +T    
Sbjct: 114 EAQREEMRRRGVMPRYSGRCRHLTAAER-------RRLAAEGRPFTVRFRVPEGQTVSFE 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+    + F +  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVHGTVSFETDGIGDF---VIVKSDGIPTY---NFAVAVDDHSMQISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                  V  A+              V L  +    K+SKR    +       ++G 
Sbjct: 219 NTAIQLLVYDALGFPTPGFAH-----VPLILNESGKKLSKRDESVVQFVEQYRDLGY 270


>gi|260775152|ref|ZP_05884050.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608853|gb|EEX35015.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 942

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 32/243 (13%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRP--------LLKSDGSYTYFAADLAYF 341
               K     +    Q  +    S ++G++ D+         +    G   Y   D    
Sbjct: 496 ELVEKVALLVEEKGIQAWWDLEISDLLGEEADKYEKVLDTLDVWFDSGVTHYSVVD---A 552

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           + +Y  G    +Y+ GSD   G+ +     + A+ ++     VL    V    DG   KM
Sbjct: 553 REEYN-GASADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGQGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 659

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L       +++P E         +   LA    ++  A      + 
Sbjct: 660 IRNTAR---FFLANLSGFNPATDLVPAEEMVALDRWAVGRALAAQEEIV-KAYGEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VTQ 718


>gi|148266948|ref|YP_001245891.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392994|ref|YP_001315669.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794269|ref|ZP_05643248.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407213|ref|ZP_05680358.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420820|ref|ZP_05683756.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258446123|ref|ZP_05694284.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258453822|ref|ZP_05701795.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|295407379|ref|ZP_06817176.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297246459|ref|ZP_06930299.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|147740017|gb|ABQ48315.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945446|gb|ABR51382.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788241|gb|EEV26581.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841171|gb|EEV65620.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843212|gb|EEV67625.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257855100|gb|EEV78042.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257863993|gb|EEV86748.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|285816189|gb|ADC36676.1| Methionyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967736|gb|EFG43768.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176646|gb|EFH35908.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315128616|gb|EFT84619.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329725056|gb|EGG61551.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 657

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + +   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|90419606|ref|ZP_01227516.1| glutamyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336543|gb|EAS50284.1| glutamyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 473

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 61/347 (17%), Positives = 108/347 (31%), Gaps = 63/347 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A     +G ++       D          ++  
Sbjct: 5   VVTRFAPSPTGFLHIGGARTALFNWLYAR---ATGGKMLLRIEDTDRARSTEPAVKAIID 61

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                    D      Y      + V +E+  K       +  +  L  +++ +      
Sbjct: 62  GLDWMGLTADEPPVSQYERAARHREVVEEMLAK-GEAYRCYASQAELEEMRETARAEKRP 120

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              D         D   SE       P  ++ +I             L  P    T   D
Sbjct: 121 PRYD-----GRWRDRDPSEA------PEGVKPVI------------RLRAPLEGETIVHD 157

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             +  + F +  +    D  LL+SDGS TY    LA     ++ G  ++I   G DH   
Sbjct: 158 KVQGDVRFPNKDLD---DLVLLRSDGSPTYM---LAVVVDDHDMGVTHIIR--GDDHLTN 209

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITLR 411
             R   +  A+        V +   + L       K+SKR G              + LR
Sbjct: 210 AGRQTLIYKAMGWD-----VPVMAHIPLIHGADGAKLSKRHGALGIEAYQAMGYLPVALR 264

Query: 412 HVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           + +  +G            + + +  L   N     FDF K++  + 
Sbjct: 265 NYLVRLGWSHGDSEIISTEEMIEWFDLGEINKGAARFDFAKLEALNG 311


>gi|306819650|ref|ZP_07453313.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552295|gb|EFM40223.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 882

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 54/196 (27%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP      +      G  +   +        I     N TG +H+GH     + D L   
Sbjct: 8   SPQDFEDKIYKKWEDGGYFKAKMTNPDKTYCIVLPPPNITGQLHMGHALDHTLQDILIRF 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+              +  +++   +  + + N +    E      +LK      
Sbjct: 68  KRMQGYDTL-------WQPGTDHASIATEVKVVEKIKNEEGKSKEEIGREEFLKR-AWAW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +++  ++++                         +K L    D          G    +
Sbjct: 120 KEEFGGKIVSQ------------------------MKKLGDSCDWSRERFTMDEGCNEAV 155

Query: 274 RDIIDNLARQGYVYEG 289
            +    L   GY+Y G
Sbjct: 156 NEFFVKLYEDGYIYRG 171


>gi|260433606|ref|ZP_05787577.1| glutamyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417434|gb|EEX10693.1| glutamyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 468

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 125/417 (29%), Gaps = 81/417 (19%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G +        D          ++ 
Sbjct: 4   QVVTRFAPSPTGFLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRERSTPEATEAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    ++D D+   +        V  +L  +       F  ++ +   ++ +     
Sbjct: 61  KGMEWLGLDHDGDVISQFARADRHAEVANQLLAE-GKAYKCFSTQEEIAAFREQARAEGK 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +                    H   P  +R                +  P+   T   
Sbjct: 120 STLFRSPWREADP--------STHPDRPFVVR----------------IKAPQDGVTVIR 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH  
Sbjct: 156 DKVQGDVTIRNDQLD---DMVLLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHLN 207

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITL 410
              R   +  A+        V +   + L       K+SKR G                +
Sbjct: 208 NAARQMMIYQAMGWD-----VPVWAHIPLIHGPDGKKLSKRHGALGAQEYQAMGYPAAGM 262

Query: 411 RHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           R+ +  +G             +  +  L         FD  K++           Q+   
Sbjct: 263 RNYLARLGWSHGDDEFFTDEQAREWFDLDGIGKSPARFDLKKLENLCG-------QHIAI 315

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE----YPRVIENA 512
              +  RQ  +I   LD    P+    Q ++ + +    +  L +    +P ++E A
Sbjct: 316 SDDAALRQ--EIQAYLDAANLPQLTDAQAADLERA----MFCLKDRARTFPELLEKA 366


>gi|254486291|ref|ZP_05099496.1| glutamyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043160|gb|EEB83798.1| glutamyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 466

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 123/416 (29%), Gaps = 73/416 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               +   + +PTG +H+G  R A+     A      G +        D          +
Sbjct: 2   PTPVVTRFAPSPTGYLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRVRHTPEATDA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +         ++D D+   +        V  EL                    K ++ Q 
Sbjct: 59  ILQGMAWLGLDHDGDIVSQFDNAPRHAEVALELL-------------AAGKAYKCFASQE 105

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +   RD  KA        +    +   DP+   D              ++     ++ +
Sbjct: 106 EIAEFRDTAKAEG---RSTLYHSPWRDADPATHPDA-----------PYVVRIKAPQSGE 151

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
               DR Q   R      D D  LL+SDG+  Y    LA     ++ G  ++I   G DH
Sbjct: 152 TVIQDRVQGDVRIGNDQLD-DMVLLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------I 408
                R   +  A+        V +   + L       K+SKR G               
Sbjct: 206 LNNAARQMMIYTAMGWD-----VPVWAHIPLIHGPDGKKLSKRHGALGAQEYQAMGYPAA 260

Query: 409 TLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            +R+ +  +G           + +  +  L         FD  K++          +  A
Sbjct: 261 GMRNYLARLGWSHGDDEFFTDAQAQEWFDLDGIRKSPAQFDLKKLENICG------LHIA 314

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
            +   ++ R   +I   L     P     Q    + +   L     ++P ++E A 
Sbjct: 315 ASDDAALRR---EIEGYLKAAGLPALTEAQAQGLERAMYCLKDRAKKFPELLEKAA 367


>gi|149924630|ref|ZP_01912984.1| Valyl-tRNA synthetase, class Ia [Plesiocystis pacifica SIR-1]
 gi|149814515|gb|EDM74102.1| Valyl-tRNA synthetase, class Ia [Plesiocystis pacifica SIR-1]
          Length = 922

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 56/214 (26%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   L +       +            +     N TG +H+GH   A + DTL   
Sbjct: 12  DPAQVEAPLYAHWRDQGYFQPADGDAPHFTVV-LPPPNVTGRLHMGHALTATIEDTLVRW 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+                                    LP   + G+  + + +  
Sbjct: 71  HRMRGHRAL--------------------------------WLPGTDHAGIATQVMVERQ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K          E +L  V ++  +    II +  + L    D               +
Sbjct: 99  LAKEGKTRQGVGREAFLDKVWEWKEEHG-GIIDEQHERLGASLDWSRYRFTMDEVSSRAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R+    L  QG +Y           +Q    D +
Sbjct: 158 REAFVRLHEQGLIYRDYRLINWDHGSQTALSDLE 191


>gi|170740460|ref|YP_001769115.1| isoleucyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168194734|gb|ACA16681.1| isoleucyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 989

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 27/233 (11%)

Query: 319 DVDRPLLKSDGSYTYFAAD------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVA 371
           DV      S  ++ +   D      LA  + + + G D ++Y+ GSD   G+       +
Sbjct: 572 DVLDVWFDSGSTHAFTLEDPVAFPGLAGIRRRRDGGDDTVMYLEGSDQHRGWFHSSLLES 631

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                +     VL    V    D    KMSK  G+ +  + V+   G+D +R  +     
Sbjct: 632 CGTRGRAPYDVVLTHGFV---LDPKGEKMSKSRGNVVAPQDVIAASGADILRLWVAASDY 688

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           ++ L      +K  S+          Y + R+  R                      +E 
Sbjct: 689 TDDLRIGPPIIKTFSE---------TYRKLRNSLRWMLGT-----LAHHRPEDRVAPAEM 734

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD--LASVFHGHWSHGREN 542
              E  ++  LAE    I  A  A +  ++   L +  +       +   R++
Sbjct: 735 PELERFILHRLAELDGEIREAYAAYDFKRVVA-LLNGFMTGDLSSFYFDVRKD 786


>gi|27467208|ref|NP_763845.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866105|ref|YP_187764.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241859|ref|ZP_04796304.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251809944|ref|ZP_04824417.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875022|ref|ZP_06283897.1| glutamate--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293367903|ref|ZP_06614541.1| glutamate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|30173135|sp|Q8CTU3|SYE_STAES RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|67461623|sp|Q5HRM5|SYE_STAEQ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|27314750|gb|AAO03887.1|AE016744_290 glutamyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636763|gb|AAW53551.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234637|gb|EES36949.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251806487|gb|EES59144.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296350|gb|EFA88869.1| glutamate--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291317932|gb|EFE58340.1| glutamate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329734687|gb|EGG70994.1| glutamate--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329738045|gb|EGG74266.1| glutamate--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 484

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 104/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYNGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +G+  G Y +    E+ +    +LL   +  K     ++   
Sbjct: 64  ----KWLGLDWDESVDKDKGF--GPYRQSERAEIYNPLIQQLLEEDKAYKCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         PK +T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQYEAEGRKPSIRFRVPKDQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YTFNDMVKGEISFESDNIGDW---VIVKKDGVPTYN------FAVAVDDHYMQISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHVSNTPKQLMIYEAFGWEAPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|323128081|gb|ADX25378.1| glutamyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 482

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 116/340 (34%), Gaps = 58/340 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 11  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 64

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                ++    ++   +  E Y        Y K++ + LA+  + +     +E      +
Sbjct: 65  -----KWLGMDWDESPETHEQYRQSERLDLYQKYIDQLLAEGKAYKSYVTEDELAAERER 119

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     Q   +I+E +                   G V    L   
Sbjct: 120 QEAAGETPRYINEFLGMTEEQKAAYIAERE-----------------AAGIVPTVRLAVN 162

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           ++   +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 163 EAGIYKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR 217

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             G DH     +   V  A+  +          +  +       K+SKR  + +      
Sbjct: 218 --GDDHIANTPKQLMVYEALGWEAPAFGH----MTLIINSETGKKLSKRDTNTLQFIEDY 271

Query: 415 DEVGS--DSV-RFMMLWRKNS--ELLDFDFCKVKEQSKEN 449
            + G   ++V  F+ L   N   E   F   ++ +   EN
Sbjct: 272 RKKGYMPEAVFNFIALLGWNPGGEEEIFSLEQLIDLFDEN 311


>gi|299536738|ref|ZP_07050048.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727852|gb|EFI68417.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 658

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 109/342 (31%), Gaps = 72/342 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  DT+A      GY+V            ++     +  +  +A   
Sbjct: 17  PSGKFHIGTAYTTVASDTIARYKRLKGYDVR-------FLTGMDEHGQKIQEKAAEA--- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G +P  Y+  +       +   L++   + ++   +D   +A+ KI +  L  
Sbjct: 67  -------GKHPQDYVNEIADAAKKLWG--LMDISYDDFIQTTQDRHTKAVEKIFQKFLDN 117

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPK 295
            +I             + F +E     G+       +  +  + Y      Y   L    
Sbjct: 118 GDIYKGEYEGWYCTPCESFFTETQLVDGNCPDCGRPVHKVKEESYFFNMKKYADRLLAYY 177

Query: 296 SKTTQKCDMDRKQLLFRSTMV---------------------GDDVDRPLLKSDGSYTYF 334
            +  +  + + ++    +  +                     GD      +  D    Y 
Sbjct: 178 EENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNYI 237

Query: 335 AADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCE 387
            A L Y     E  F+      ++V+G D    + R   +      ++        +   
Sbjct: 238 TA-LGYLSE-DESLFNKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKVFAH 291

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              + +DG   KMSK  G+ I    +++  G D+ R+ +L  
Sbjct: 292 GFIMMKDG---KMSKSKGNVIYPEMLIERYGLDATRYFLLRE 330


>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
          Length = 465

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 127/431 (29%), Gaps = 101/431 (23%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  ++ DTL   + + GY+VT   Y+                  Q 
Sbjct: 27  CGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVT---YV------------------QN 65

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +D  +   +  G+  + V  +   +Y  +            +K  +V   +     
Sbjct: 66  FTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLG-------IKRATVHPQVTD--- 115

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGILPPPKSK 297
                                +   I + I  L  +GY Y                 K  
Sbjct: 116 ---------------------NIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLS 154

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAA----DLAYFK---CKYERG 348
             ++ D++    +  +      +D  L   K +G   + +        +        +R 
Sbjct: 155 GQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRY 214

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I +            E   A    +  +I      +   Y +    KMSK  G+F 
Sbjct: 215 LGETIDIHAGGQDLTFPHHENEIAQSEARSGKIFSKYW-MHNGYININDEKMSKSKGNFF 273

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VRF ML       ++F   ++  Q+K                   + 
Sbjct: 274 TVRDISKLYDLEIVRFFMLSAHYRNPVNFS-DEMLNQAKAG---------------LERL 317

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAF 523
            +    L+F L        ES     E++L+  L ++ +   +A             +  
Sbjct: 318 YNTKEKLEFTLSNL----VESPLTEKEVELVKELDDFRQKFIDAMDDDVNTADAVSVI-- 371

Query: 524 YLYDLASVFHG 534
             ++LA + + 
Sbjct: 372 --FELAKLINS 380


>gi|152991206|ref|YP_001356928.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166231623|sp|A6Q512|SYL_NITSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151423067|dbj|BAF70571.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 815

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +   +       +         K+ +  +   P+G +H+GH R   +GD +A  
Sbjct: 4   DPKAIEQKWQNEWKEKNAFEPQENYSKEKMYVLSMFPYPSGRIHMGHVRNYTIGDAIARY 63

Query: 154 MAFSGYEV 161
              +G  V
Sbjct: 64  YRKTGANV 71


>gi|118587581|ref|ZP_01545005.1| glutamyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432032|gb|EAV38774.1| glutamyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 498

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/302 (20%), Positives = 105/302 (34%), Gaps = 41/302 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A    ++G  + R   I D       LA +V    +  
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGQFIIR---IED-----TDLARNVKDGEKSQ 59

Query: 189 L---------YNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSV 238
           L         ++   D P   Y          + +  KY  ELL           K Y  
Sbjct: 60  LDNLQWLGIDWDEGPDKPNSKYAPYRQTERASQGIYQKYIDELLASG-----KAYKSYKT 114

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +A +K  R+  +A   Q   ++ E  +       I+D        G         P++  
Sbjct: 115 EATLKEERE-AQAQAHQAPHYVYE--YSGMTKEQIKDAQAKDEVAGLKSVVRFRVPENHD 171

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
            Q  D+ + ++   S  +G   D  + K+DG  TY  A +       +     + +V+ G
Sbjct: 172 YQWQDLVKGEVKINSKEIG--GDWVIQKADGMPTYNFAVV------IDDHLMEITHVLRG 223

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   V  A   K          +  + +     K+SKR  D +       E+
Sbjct: 224 DDHVSNTPKQLMVYDAFGWKAPAFGH----MALIIKAETGKKLSKRDEDTLQFIEQYREL 279

Query: 418 GS 419
           G 
Sbjct: 280 GY 281


>gi|27262492|gb|AAN87527.1| Valyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 373

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +  ++   G   ++     N TG +H+GH     + D L    
Sbjct: 15  PKQVEGKWYQYWTENNLFRADVNADGEPFSVVMPPPNVTGSLHLGHALDNTLQDILVRWK 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+                             L+   +D           + +  E  
Sbjct: 75  RMQGFNT---------------------------LWVPGTDHAGIATQAKVEESLASEGQ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            KY     +   EK+L  V D+  Q   +I    L+ L    D          G    ++
Sbjct: 108 SKY-----DLGREKFLERVWDWKHQYGNRITSQ-LRYLGTSCDWGRERFTMDEGCSQAVQ 161

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +G +Y G
Sbjct: 162 EVFVRLFEKGLIYRG 176


>gi|15644103|ref|NP_229152.1| glutamyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|148270561|ref|YP_001245021.1| glutamyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|6685988|sp|Q9X172|SYE1_THEMA RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|238686677|sp|A5IMM2|SYE2_THEP1 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|4981911|gb|AAD36422.1|AE001789_7 glutamyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|147736105|gb|ABQ47445.1| glutamyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 469

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 99/286 (34%), Gaps = 45/286 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  +  +         REY           L  
Sbjct: 7   APSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLERSEREY--------EEKLME 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W     L++   D+  G   G Y +    E+  +++  L+           K Y V 
Sbjct: 59  SLRW--LGLLWDEGPDV--GGDHGPYRQSERVEIYREHAERLVKEG--------KAYYVY 106

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  + I +  + L  +        +      +P R        +G     +      K  
Sbjct: 107 AYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPERR--REYEEKGL-RPAVFFKMPRKDY 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ + +++F++  +GD     +++S+G  TY   + A           ++I   G D
Sbjct: 164 VLNDVVKGEVVFKTGAIGDF---VIMRSNGLPTY---NFACVVDDMLMEITHVIR--GDD 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A  +       +      L  DG   K+SKR G
Sbjct: 216 HLSNTLRQLALYEAFEKAPPVFAHVS---TILGPDGK--KLSKRHG 256


>gi|116490418|ref|YP_809962.1| glutamyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122277393|sp|Q04GX5|SYE_OENOB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116091143|gb|ABJ56297.1| glutamyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 498

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 103/295 (34%), Gaps = 27/295 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A    ++G  + R   I D       LA +V    +  
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGQFIIR---IED-----TDLARNVKDGEKSQ 59

Query: 189 LYNNDSDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           L +N   L   +  G      K+      ++ +  +     ++ L   K Y        +
Sbjct: 60  L-DNLQWLGIDWDEGPDKANSKYAPYRQTERAAQGVYQKYIDELLASGKAYKSYKTEATL 118

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++ +A    H       ++       I+D        G         P++   Q  D+ 
Sbjct: 119 KEEREAQAQAHQAPHYVYEYAGMTKEQIKDAQAKDEAAGLKSVVRFRVPENHDYQWQDLV 178

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           + ++   S  +G   D  + K+DG  TY  A +       +     + +V+ G DH    
Sbjct: 179 KGEVKINSKEIG--GDWVIQKADGMPTYNFAVV------IDDHLMEITHVLRGDDHVSNT 230

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   V  A   K          +  + +     K+SKR  D +       E+G 
Sbjct: 231 PKQLMVYEAFGWKAPAFGH----MALIIKAETGKKLSKRDEDTLQFIEQYRELGY 281


>gi|319399724|gb|EFV87973.1| glutamyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
 gi|329729463|gb|EGG65866.1| glutamate--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 484

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 104/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYNGDFVVRIED----TDSKRNLEDGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +G+  G Y +    E+ +    +LL   +  K     ++   
Sbjct: 64  ----KWLGLDWDESVDKDKGF--GPYRQSERAEIYNPLIQQLLEEDKAYKCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         PK +T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQYEAEGRKPSIRFRVPKDQT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YTFNDMVKGEISFESDNIGDW---VIVKKDGVPTYN------FAVAVDDHYMQISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHVSNTPKQLMIYEAFGWEAPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|319891443|ref|YP_004148318.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161139|gb|ADV04682.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465387|gb|ADX77540.1| methionyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 657

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 110/352 (31%), Gaps = 82/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I                 
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRLQGFDVRYLTGTDEHGQKI-------------QEKA 61

Query: 192 NDSDLPEGYYPGVYLKHVG--KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            ++ + E  Y    +K +    E  D  + + +   E +   +V+        KI    L
Sbjct: 62  QNAGMSELDYLDGMIKDIKALWEKLDISNDDFIRTTERRHTEVVE--------KIFEKLL 113

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              +I    +                ++D +   G +   +         +   +  +  
Sbjct: 114 SKGDIYLGEYEGWYSVPDETFYTETQLVDPVYEDGKI---VGGKSPDSGHEVELVKEESY 170

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG---- 348
            F+   + +  DR L   D    +                    DLA  +  +  G    
Sbjct: 171 FFK---LSNYTDRLLAFYDAHPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVKVP 227

Query: 349 --FDNMIYVM---------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
               +++YV                  DH  + +   A    ++++  + + ++  ++ +
Sbjct: 228 SNPKHVVYVWLDALVNYVSALGYLTDDDH-LFRQYWPADIHLMAKEIVRFHSIIWPIILM 286

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 287 ALDLPLPKKVFAHGWVLMKDGKMSKSKGNVMDPNVLIDRYGLDATRYYLMRE 338


>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 913

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 116/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 461

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 462 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDS 521

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 522 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 561

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 562 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 618

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       D         V  +  E D
Sbjct: 619 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDDFKPSENTVAVA-ELREVD 668

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 669 RY------MLVKLNDLITKVKEAYE-------TYDFAAVYHAIHNFC 702


>gi|227432960|ref|ZP_03914902.1| glutamyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351306|gb|EEJ41590.1| glutamyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 498

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 111/335 (33%), Gaps = 45/335 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A+     A    ++G  V R           +   +Q+  LA   
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGTFVIRIEDTDSARNIADGEKSQLENLAW-- 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYSVQ 239
                   ++   + P     G Y +    E  +  ++   LL           K Y   
Sbjct: 66  ----LGLDWDESPEKP--GVYGPYRQSERNEQGIYQEFIDALLASG-----QAYKSYKTS 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKT 298
             +   R+  +    Q   ++ E   + G  +  R+        QG         P+ K 
Sbjct: 115 EQLASERE-AQQGAKQAPHYVYE---YEGLTNEEREAKYAEFEAQGLKPVVRFRVPEEKV 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ +  +   +  VG   D  + K+DG  TY   + A     +     +++   G 
Sbjct: 171 YAWNDIVKGHIEIGAKEVG--GDWVIQKADGMPTY---NFAVVVDDHLMKISHVLR--GD 223

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A+     +       +  +       K+SKR  + +       E+G
Sbjct: 224 DHVSNTPKQIMIYEALGWDVPKFGH----MALIINGETGKKLSKRDENLLQFVEQYKELG 279

Query: 419 ---SDSVRFMMLWRKNSELLD--FDFCKVKEQSKE 448
                 V F+ L   + +  D  F   + KE   E
Sbjct: 280 YQPQAMVNFIGLLGWSPKGEDEIFSLSEFKEMFDE 314


>gi|188584810|ref|YP_001916355.1| glutamate--tRNA(Gln) ligase, glutamyl-tRNA synthetase
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229560036|sp|B2A4B3|SYE_NATTJ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|179349497|gb|ACB83767.1| glutamate--tRNA(Gln) ligase, glutamyl-tRNA synthetase
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 488

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/411 (16%), Positives = 149/411 (36%), Gaps = 74/411 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI----NDAGAQINTLALSVFWR 184
           + +PTG +H+G+ R A+     +         +  E+ +     D    +      +F  
Sbjct: 10  APSPTGQIHIGNIRTALFNWLYSR-------HIDGEFILRVEDTDMNRSVEEYEQIIFRA 62

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMMK 243
                 + D    +G   G Y +   K++  KY+++LL   +  +     ++       +
Sbjct: 63  LSWLGLDWDEGPQKGGDFGPYRQSERKDIYHKYANKLLEAGKAYYCYCTEEELEEMREAQ 122

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R ++   + +     SE+          R  ++N  R+  +   +   P+++T +  D
Sbjct: 123 RARGEMPRYSGKCADLSSEE----------RAELENEGRKSVIRFKV---PENQTIRVND 169

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + + ++ F S  +GD +   L+KSD   +Y   + A     Y     +++   G DH   
Sbjct: 170 LVKGEVDFESDGIGDFI---LIKSDDMASY---NFACVVDDYLMNITHVLR--GEDHLSN 221

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-----HVVDEV- 417
             +   +  A+  +  +        + L       K+SKR GD          ++ + + 
Sbjct: 222 TPKQVMIYEALGFETPEFGH-----LSLILGPDKAKLSKRHGDTFIGEYREKGYLPEAMV 276

Query: 418 -----------GSDS-------VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                      G D        +R   + R +     FD  K+   +      Y++ A  
Sbjct: 277 NFLALLGWSPPGEDELFTQDELIRLFDIGRVSKSAAVFDVDKLNWMNSH----YIKEADT 332

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH----LAEYP 506
               +   +K+    ++ DL  +  +  + E+  S + L+      L+E P
Sbjct: 333 E--RLLNLSKEYL--INSDLVSQEQLEHDWEWFVSAVDLVKEKIDMLSELP 379


>gi|170725652|ref|YP_001759678.1| isoleucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|254782435|sp|B1KIT5|SYI_SHEWM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169810999|gb|ACA85583.1| isoleucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 940

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 117/347 (33%), Gaps = 59/347 (17%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  E        L    + +W+P      ++ M++      I R     + I   +   
Sbjct: 425 FISMEQKGLRKQALNEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPIALFVHRE 484

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            ++ H    S +  + + + ++G                  D+D  +LL      G++ D
Sbjct: 485 TEELHPDSSSLMERVANKIEQEG-------------IQAWWDLDAAELL------GEEAD 525

Query: 322 RPLLKSDGSYTYFAADLAY---------FKCKYE-RGFDNMIYVMGSDHS-GYVKRLEAV 370
           +    +D        D+ Y            + E +G D  +Y+ GSD   G+      +
Sbjct: 526 QYRKVTD------TLDVWYDSGSSFSSVVASRPEFQGHDIDLYLEGSDQHRGWFMSSLMI 579

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           + A++ K     VL         DG   KMSK  G+ I  + V +++G+D +R  +    
Sbjct: 580 STAMNGKAPYKQVLTHGF---TVDGNGRKMSKSVGNVIAPQTVTNKLGADILRLWVAATD 636

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
            S  +     ++ ++S +        AY R R+  R    +  +++      +++  E  
Sbjct: 637 YSGEMTVS-DEILKRSAD--------AYRRIRNTAR---FLLANINGFNPETDLVAVEEM 684

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
                   +   A     +  A      + +   L    S      +
Sbjct: 685 VALDRWA-VRRAAALQEELLEAYEQYNFHVVTQKLMQFCSVELGSFY 730


>gi|19074192|ref|NP_584798.1| VALYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621250|sp|Q8SS27|SYVC_ENCCU RecName: Full=Probable valyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Valine--tRNA ligase; Short=ValRS
 gi|19068834|emb|CAD25302.1| VALYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 921

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 49/173 (28%), Gaps = 36/173 (20%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
             +  G +  +     N TG +H+GH     + D +       GYEV      + AG  I
Sbjct: 69  KPVEGGARYVVPIPPPNVTGSLHIGHAMMVSIQDAVCRYKRMCGYEVLYIPGTDHAG--I 126

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
            T  +      ++ +  +     +             E  D++ S               
Sbjct: 127 ATQNVVSKQLAREGIVVDREGFLKK----------AWEWKDRHGSR-------------- 162

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                     I + LK L    D          G    + D    L  +G +Y
Sbjct: 163 ----------IYEQLKRLGTSVDFGRERFTLDPGMSRAVADAFVKLYEKGLIY 205


>gi|157364834|ref|YP_001471601.1| valyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166987328|sp|A8F8Q3|SYV_THELT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157315438|gb|ABV34537.1| valyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 861

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 61/216 (28%), Gaps = 35/216 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + K      V    +     G G    I     N TG +H+GH     + D L 
Sbjct: 6   RYSPEQIEKKWYERWVEKGYFAPK--GSGIPFVIVIPPPNITGRIHMGHALNITLQDILV 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++     ++            +   RY ++                       
Sbjct: 64  RYKRMRGFDTL---WV-PGEDHAGIATQNAVERYLES----------------------- 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          EK++ IV +++ +   K IR  ++ L    D          G   
Sbjct: 97  -----QGKSREQLGREKFIEIVWEWA-KKYRKEIRQQIETLGASVDWSRERFTLDDGLSK 150

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +  +L  +G +Y G          Q    D +
Sbjct: 151 AVRKVFVDLYNRGLIYRGKYMVNWCPRCQTVLSDEE 186



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 86/234 (36%), Gaps = 42/234 (17%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +KK   +V + +L+   RD    KMSK  G+
Sbjct: 480 TGFD-IIFFW-------VARMIIMGYQFMQKKPFTDVYIHQLI---RDKHGRKMSKSLGN 528

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    + ++ G+D VRF  L    ++  D    +    +      Y ++A         
Sbjct: 529 GIDPIDMSEKYGTDPVRFT-LAIFAAQGSDIKLDERYFDT------YRKFANKI------ 575

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                F  ++ D +    + + S  D     ++  L +   V+ +A    E    A  LY
Sbjct: 576 WNAARFVLINLDNYKPQPLNELSLAD---RWILSKLQKVISVVSDAIEKYEFNIAARSLY 632

Query: 527 DLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +    F   W+             + +  + +T     LV     ++++ L ++
Sbjct: 633 E----F--FWNEFCDWYIESSKLVLNSEKKAITQN--VLVK----VLDTSLRLL 674


>gi|332291727|ref|YP_004430336.1| isoleucyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169813|gb|AEE19068.1| isoleucyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 1135

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+       ++
Sbjct: 643 GVDQTRGWFYTLHAIATMIFDDVAYKNVVSNGLV---LDKNGQKMSKRLGNATDPFETLE 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + G D+ R+ M+   N  + L FD   ++E + K     Y  Y +    +          
Sbjct: 700 KYGPDATRWYMISNANPWDNLKFDLEGIEEVKRKFFGTLYNTYNFFALYANLDNFAFAEA 759

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +++    P       SE       LI  + ++           EP
Sbjct: 760 EIELSQRPEIDRWILSELH----SLIAEVDKF-------YAEYEP 793


>gi|315148087|gb|EFT92103.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 677

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 24  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 74  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 121 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 177

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 178 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 235

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 236 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 295

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 296 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 346


>gi|284931752|gb|ADC31690.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Mycoplasma gallisepticum str. F]
          Length = 498

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 100/291 (34%), Gaps = 57/291 (19%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIND-AGAQINTLA 178
           + +PTG  H+G  R A+          G+ +  +      +   E  + D A  Q+  L 
Sbjct: 9   APSPTGYFHIGGARTALFNYLFAKHNNGEFIVRI-----EDTDIERNVEDGAENQLYNL- 62

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                ++     +     P     G Y +    E+  KY+ +LL     +     + +  
Sbjct: 63  -----KWLNIFADESIWNPTQS--GPYRQSEKLEVYQKYAYQLL-----EEKKAYRCFCT 110

Query: 239 QAMMKIIRDDLKA-----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
              ++  R+DL       +  +    +SE+   +     I   I  L R    Y      
Sbjct: 111 PEELQKHREDLLKQYKPPIYSRKCFLLSEEQIQKNLADKIPFTIRLLLRDNKEY------ 164

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                    D+ R  L+F ++ + D     +LKS+   TY   + A     ++    +++
Sbjct: 165 ------SWNDLIRGNLIFNTSSMSDP---VILKSNQIATY---NFAVVIDDHDMKISHIL 212

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              G +H        A+  A+  K       +   + +  D    K+SKR 
Sbjct: 213 R--GEEHISNTPYQLAIKEALGFKDE----FVYGHLSIIVDETGKKLSKRN 257


>gi|164659850|ref|XP_001731049.1| hypothetical protein MGL_2048 [Malassezia globosa CBS 7966]
 gi|159104947|gb|EDP43835.1| hypothetical protein MGL_2048 [Malassezia globosa CBS 7966]
          Length = 394

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 117/366 (31%), Gaps = 61/366 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A++    A       ++     + +R          +  L  S+ 
Sbjct: 41  APSPTGYLHVGGLRTALLNQLCARRNGGQWILRIEDTDQSRV-----VDGAVTALQESLR 95

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D   P     G Y++    +    Y+++LL           +D+      
Sbjct: 96  WAGLEYDEGPDVGGP----YGPYVQSQRLDKYTAYANKLLQSG-----HAYRDFRPPTQR 146

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +         N +    + E      +      I      +G  +   L     +T    
Sbjct: 147 EE--------NARASALLREAYLPPSEAEAQERI-----GRGETFVVRLKMDPQRTYVYN 193

Query: 303 DMDRKQLLFRSTMV-GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D+    + FR  ++ G   D  ++KSDG  TY    LA      E    +++   G +  
Sbjct: 194 DVVYGAMKFRPDVMSGATDDPIIVKSDGWPTYH---LASVVDDTEMRITHVLR--GEEWI 248

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI---------TLRH 412
             + +  A+  A+              + L  +    K+SKR+GD               
Sbjct: 249 PSMPKHLALYEALGAPPPVFVH-----LPLLVNADGTKLSKRSGDVRVTDYQERGWEPET 303

Query: 413 VVDEVGSDSVRFMMLWR-----KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI--- 464
           +V+ V         + R     K  + L   F   +     + +   + AY     +   
Sbjct: 304 LVNLVALTGYSHADVDRADQDVKTMDELTEQFDLTRISHTRSTLPLDKLAYLNKHHLRCK 363

Query: 465 FRQAKD 470
             +A+D
Sbjct: 364 LERARD 369


>gi|66824081|ref|XP_645395.1| glutamate-tRNA ligase [Dictyostelium discoideum AX4]
 gi|60473534|gb|EAL71477.1| glutamate-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 584

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 101/279 (36%), Gaps = 29/279 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     +G  + R     D    +   A S+    + A
Sbjct: 65  APSPTGYLHLGGLRTALFNYLFAK--KNNGTFILRIE-DTDRTRFVEGSAKSLAGCLEWA 121

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D         G Y++     +  +Y+ +L+             ++        R  
Sbjct: 122 GIPYDEGPSRPGECGPYVQSERLPIYKEYAEKLVKSG----------HAYHCFCSSERLS 171

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +  +N+++   +S  D H    S   D I    + G  +   L  P    T+  D  +  
Sbjct: 172 MSRINLKNQHAMSLYDRHCLKLS--EDEIQRKLQSGESHTIRLKIPPG-ITKFTDHVKGT 228

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F + ++    D+ L+KSDG  TY    LA     +  G  ++I   G +      +  
Sbjct: 229 VQFNNQLID---DQVLMKSDGYPTYH---LASVVDDHLMGISHIIR--GEEWLNSTPKHI 280

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A   K  Q+       V L  +    K+SKR GD 
Sbjct: 281 ILYQAFGWKPPQMVH-----VPLLLNSDKSKLSKRQGDV 314


>gi|325478237|gb|EGC81356.1| methionine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 647

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/409 (15%), Positives = 135/409 (33%), Gaps = 64/409 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF---WRYQQA 188
           P   +H+G+   +V+ D L       GY+       ++ G +I   A +       +   
Sbjct: 16  PNSNLHIGNTYTSVIADVLKRYKNLLGYDTYLTTGTDEHGQKIMKSAEAAGVDPQSFVDK 75

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           + +   DL E          +  +   + +        E+    + +        I + +
Sbjct: 76  IASETIDLWE-------KLEIDYDTFIRSTESQHEKDVEEIFTKLYEQG-----DIYKGE 123

Query: 249 LKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            K       + F S+     G        ++    + Y +       + K   K   D  
Sbjct: 124 YKGYYCTPCETFWSKSQLEDGKCPDCGRDVEYQEEETYFFRLSKYTDRLKELFKDHPDFL 183

Query: 308 QLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVM-GS- 358
           +  FR   M+ + +D+ L           +DL+  +  ++ G D      +++YV   + 
Sbjct: 184 EPAFRQKEMLNNFIDKGL-----------SDLSVTRNTFDWGVDVPFDNEHVVYVWIDAL 232

Query: 359 ----------DHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG------------ 395
                     D+    ++   A    + +   + + ++   + +  D             
Sbjct: 233 SCYLSAIGYGDNKEKFEKYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWI 292

Query: 396 --MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVF 452
                KMSK  G+ +    +VD  G D+++F ML   N     +F   K  E+   + V 
Sbjct: 293 LFDNDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSARKFMERYNSDLVN 352

Query: 453 YVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +    +R  S+  +     +      D +   +I    E  T+  +L+
Sbjct: 353 DLGNLVSRTTSMIDKYNGGVVRKGSVADTYDDELIALAEETYTNFNKLM 401


>gi|295099763|emb|CBK88852.1| glutamyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 490

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 97/283 (34%), Gaps = 28/283 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+    +A      G +        D   Q+      ++   +  
Sbjct: 9   APSPTGYMHIGNLRTALFEYLIA---KHDGGDFILRIEDTDQERQVEGAVDVIYDTMKTC 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D     G   G Y++     +   Y+ EL+      +      +  +  ++  R +
Sbjct: 66  GLNWDEGPDIGGEHGPYIQSERLPMYKGYAEELVKLGGAHYC-----FCSEEEIEAQRKE 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            ++L I          F+       ++ I      G  Y       +   T   DM    
Sbjct: 121 AESLGISF-------KFNDPCKHLSKEEIQAKLDAGEPYVIRQTIEEVGETSFDDMVYGH 173

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F   ++ +   + L+KSDG  TY  A++      ++    ++  V G+++     +  
Sbjct: 174 IEFDGDLLDE---QILIKSDGFPTYNFANI---IDDHQMEISHV--VRGNEYLSSTPKYN 225

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +  A   ++          V         K+SKR GD     
Sbjct: 226 LIYDAYGWQRPTYVH-----VPPVMKDEHHKLSKRNGDASFQD 263


>gi|220929554|ref|YP_002506463.1| glutamyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999882|gb|ACL76483.1| glutamyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 489

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 104/286 (36%), Gaps = 29/286 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+    +A    ++G  + R     D    +      ++   + A
Sbjct: 9   APSPTGYMHIGNLRTALYEYLIAR--KYNGKFILRIE-DTDQERFVEGAIDVIYKTLKLA 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N+D     G   G Y++   K +  +Y+ +L+                       ++ 
Sbjct: 66  GINHDEGPDVGGSYGPYVQSERKGMYLEYAKKLVELGGA------------YYCFCTKER 113

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  L  + D       + R      ++ I+   R+   Y      P + TT   D     
Sbjct: 114 LAELKEKQDAEGHGHRYDRCCLKLSKEEIEENLRKNVPYVIRQKMPDTGTTSFNDAVYGT 173

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D+ L+K+DG  TY   + A     ++    ++  V G+++     +  
Sbjct: 174 ITVDNSELD---DQILIKTDGLPTY---NFANVIDDHQMEISHV--VRGNEYLSSTPKYN 225

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            +  A   +           V L       K+SKRAGD  +   +V
Sbjct: 226 LLYEAFGWEVPTYVH-----VPLILKASGQKLSKRAGD-PSFEDLV 265


>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 910

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 124/390 (31%), Gaps = 73/390 (18%)

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--DL-----KALNIQHDIFISEDDFH 266
            D + SELL   +        ++    +  +IRD  D      +   +   +F +E+   
Sbjct: 416 VDAFRSELLEAVD--NTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIPVFYAENGEA 473

Query: 267 RGDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             D   I  +      +G            + EG   P         +MD   + F S  
Sbjct: 474 ILDIELIEHVAKIFEEEGSNVWFYKDTKELLPEGYTHPGSPNGEFTKEMDIMDVWFDSGT 533

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAV 374
                      S         DL Y            +Y+ GSD   G+       + AV
Sbjct: 534 -----------SHQGCCAIREDLTYPAD---------LYLEGSDQYRGWFNSSLITSVAV 573

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           S       ++    V    DG   KMSK  G+ I+   V  E+G++ +R        ++ 
Sbjct: 574 SGVAPYKELVSAGFVM---DGNGNKMSKSLGNVISPNDVGKELGAEIIRLWSASVDYTQD 630

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +      +K+ S+          Y + R+ FR       +  F+     V  +  E    
Sbjct: 631 VRISKDILKQVSE---------TYRKIRNTFRFLLGNLYNGSFNNKTDLVAYENLEELDK 681

Query: 495 ELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYDLASVFH----GHWSHGRENPRLRF 547
                  + ++ +V+          +   +     +L + F+      +        + +
Sbjct: 682 -----YMVLKFEKVVAKVLDYYENYQFNSITT---ELINFFNVELSSFY--LDYGKDILY 731

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNII 577
           ++  +       L +++   ++++  + ++
Sbjct: 732 IEGEDSHKRQSMLTVLY---TVLSKSVRLL 758


>gi|188584421|ref|YP_001927866.1| valyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347919|gb|ACB83331.1| valyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 906

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 69/243 (28%), Gaps = 34/243 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
             +P+ +   +S+    G  +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFNPAAVEARVSAAWEEGEAFRAGRPERAGAEPFSIVIPPPNVTGSLHMGHALNNTIQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +   + AG     +                               V
Sbjct: 65  LVRFERMRGRDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L +           E++L  V  +  ++   II   LK L    D          G 
Sbjct: 94  ERKLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQ-LKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +     +L  QG +Y            Q    D +             D P++   G
Sbjct: 153 SRAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGKLWHFDYPVVDEAG 212

Query: 330 SYT 332
           + T
Sbjct: 213 AET 215



 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +   ++++     V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 515 WVARMMMMGLHLTDQAPFDTVYLHTLV---RDEKGAKMSKSKGNVVDPVDLIDRFGADAL 571

Query: 423 RFMM 426
           RF +
Sbjct: 572 RFTL 575


>gi|15894277|ref|NP_347626.1| glutamyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|30316181|sp|Q97KC9|SYE_CLOAB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|15023897|gb|AAK78966.1|AE007614_14 Glutamyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508404|gb|ADZ20040.1| Glutamyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 485

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 115/350 (32%), Gaps = 64/350 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+    +A       ++     +  +E Y+ DA      LA+   
Sbjct: 11  APSPTGYMHIGNLRTALYTYLIAKHEDGKFILRIE--DTDQERYVEDA------LAVIYK 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L +++     G   G Y++   K L   Y+ +L+   E                
Sbjct: 63  TLEMTGLKHDEGP-DVGGPVGPYVQSERKGLYLDYAKKLVEKGEA------------YYC 109

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              ++ L  L    +       + +   +  ++ +      G  Y      P + +T   
Sbjct: 110 FCSKERLDILKTNSEALKRPFKYDKHCANLSKEEVQEKLDAGVPYVIRQNNPTTGSTTFD 169

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+   ++   S    +  D  L+KSDG  TY   + A     +  G  ++  V G+++  
Sbjct: 170 DVIYGRI---SVDNSELDDMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEYLS 221

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------RHV 413
              +   +  A        NV +             K+SKR GD               V
Sbjct: 222 SAPKYNRLYEAFGW-----NVPIYVHCPPIMKDAHSKLSKRNGDASFQDLIEKGYLKEAV 276

Query: 414 VDEVG---------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           ++ +                 D V+       N     FD  K+K  + E
Sbjct: 277 LNYIALLGWNPEGTNEILSLEDMVKLFDYTHINKSPAVFDPVKLKWMNGE 326


>gi|67469347|ref|XP_650652.1| valyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56467298|gb|EAL45265.1| valyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 1050

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 55/197 (27%), Gaps = 33/197 (16%)

Query: 92  YLSPSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             SP Y+ +         G          G K  +     N TG +H+GH     + DT+
Sbjct: 94  TYSPKYVEEGWYEWWEKEGFFKPEYSKRSGKKFVMVIPPPNVTGKLHLGHALTNSIQDTI 153

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G E      ++ AG     +      R                  GV    +G
Sbjct: 154 VRYHRMKGDETLWVPGVDHAGIATQVVVEKKLMRE----------------QGVTRHDIG 197

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +E           F EE W    KD       K I + L+ L    D             
Sbjct: 198 RE----------KFLEEVW--KWKD----EYGKGICNQLRRLGSSLDWSREVFTMDEKRG 241

Query: 271 SPIRDIIDNLARQGYVY 287
             +++       +G +Y
Sbjct: 242 EAVKEAFCRFYEKGLLY 258


>gi|332298687|ref|YP_004440609.1| glutamyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181790|gb|AEE17478.1| glutamyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 519

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 95/284 (33%), Gaps = 29/284 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  H+G  R A+     A     +G +        D          ++F      
Sbjct: 8   APSPTGMQHIGGVRTALFNYLFAR---ANGGKFILRLEDTDRTRYGEEYVQNLFDTLAWL 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D    +G   G Y++     L  K++ EL+    + +        ++ +  I    
Sbjct: 65  GIEWDEGPDKGGPYGPYVQSERFALYKKHADELVEKG-QAYYCFCDAERLERIRTIQ--T 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +  +   +D               I+  ID     G  Y   L  P    T+  D     
Sbjct: 122 MNKMPPGYD-----RSCRHLTAEEIKANIDA----GKPYVIRLKVPLEGVTRFHDALLGD 172

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS-DHSGYVKRL 367
           + +++  +    D  LLKSDG  TY  A++       +  F  + +VM + +        
Sbjct: 173 IEWKNEDINP--DPVLLKSDGFPTYHLANI------VDDHFMKITHVMRAQEWIPSTPLH 224

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             +  A   +  Q   L    + + +DG   K+SKR G      
Sbjct: 225 VLMYRAFGWEPPQFCHL---PMVMGQDGQ--KLSKRHGATSVNE 263


>gi|312140349|ref|YP_004007685.1| valine-tRNA ligase vals [Rhodococcus equi 103S]
 gi|325677074|ref|ZP_08156743.1| valine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311889688|emb|CBH49005.1| valine-tRNA ligase ValS [Rhodococcus equi 103S]
 gi|325552059|gb|EGD21752.1| valine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 886

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 82/269 (30%), Gaps = 43/269 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 20  DPSAVEADLYQGWVDAGYFTADATSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALCRR 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E                    V W            LP   + G+  + + ++ 
Sbjct: 80  KRMQGFE--------------------VLW------------LPGMDHAGIATQTIVEKQ 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E ++  V D+  ++    I+  ++ +    D          G    +
Sbjct: 108 LAADGKKKEDFGREAFIEKVWDWKRESG-GTIQGQMRRIGDGVDWSRDRFTMDEGLSRAV 166

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPL 324
           + I   L   G +Y          +L    S    K +    +L+  R   + DD    +
Sbjct: 167 QTIFKRLYDDGLIYRAERLVNWSPVLQTAISDIEVKFEEVEGELVSLRYGSLSDDEPHVI 226

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +    T    D A      +  + ++I
Sbjct: 227 VATTRVET-MLGDTAVAVHPDDERYKDLI 254


>gi|87123441|ref|ZP_01079292.1| valyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86169161|gb|EAQ70417.1| valyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 914

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 51/193 (26%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    S   +  +    G   ++     N TG +H+GH     + DT+       G
Sbjct: 14  EARWQQAWESHGAFHPDPAAPGDPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V         G    ++A+      Q                             +  
Sbjct: 74  RNVLCLP-----GTDHASIAVQTLLEKQ---------------------------LKEEG 101

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L     +  ++  + I D L+ L    D          G    +++   
Sbjct: 102 KTRHDLGREAFLERAWQWKAESGGR-IVDQLRRLGYSVDWQRQRFTLDEGLSEAVKEAFV 160

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 161 RLHEQGLIYRGEY 173



 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 94/306 (30%), Gaps = 33/306 (10%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +  + +   F  E+W  + +D+        I   L     +   +    +          
Sbjct: 373 EALAQQAPRFIPERWEKVYRDWLTDIRDWCISRQLW-WGHRIPAWFVISETGGNYTDTTP 431

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++     +          P ++  Q  D D     F S +             G     
Sbjct: 432 YVVARNDAEALEKAKAEFGPAAQIEQ--DEDVLDTWFSSGLWPFSTL-------GWPETG 482

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           +ADL   Y       GFD +I+         V R+  +A A + +    +V +  LV   
Sbjct: 483 SADLQRWYPTSTLVTGFD-IIFFW-------VARMTMMAGAFTGEMPFKDVYIHGLV--- 531

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK AG+ I    +++  G+D++RF ++        D      ++      V 
Sbjct: 532 RDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKTDTSATVE 591

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
             +    +  +  R A                     E + + LQL     L+   RV  
Sbjct: 592 AARNFANKLWNATRFALMN--------LGGETPASLGEPEPAALQLADRWILSRLARVNR 643

Query: 511 NATIAQ 516
                 
Sbjct: 644 ETAERY 649


>gi|296126295|ref|YP_003633547.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018111|gb|ADG71348.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 651

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 69/444 (15%), Positives = 148/444 (33%), Gaps = 80/444 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GHC C +  DT+A      GY+V      ++ G +I   A +      +A  +
Sbjct: 15  PSDYLHIGHCYCTIAADTMARYKKIMGYDVYFLTGTDEHGEKIARKAEAA-DTTPKAYVD 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N  +  +  +  +++ +        Y     ++ E +   I K    +    I +   K 
Sbjct: 74  NIVNATKELWKRLHIDYS------HYIRTTDDYHERRVQKIFKILYDKGY--IYKGAYKG 125

Query: 252 LN-IQHDIFISEDDFHRGDPSPIR-----------------------------------D 275
           L  +  + F +E    + D                                        +
Sbjct: 126 LYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDYYKDHPE 185

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            ++   RQ  + +  L P              Q      +  +      +  D    Y  
Sbjct: 186 FLEPKERQNEMLKNFLLPGLEDLA--VTRKGLQWGIPCPVDSEHSIYVWI--DALSNYIT 241

Query: 336 ADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQI---NVLLCEL 388
           A L Y +   +  +       ++ +G +    + R  AV   +  K   I     +    
Sbjct: 242 A-LGYPEDGEDDLYKKYWSCDVHFVGKE----IVRFHAVIWPIMLKMLDIPLPKKVFGHG 296

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             L+ DG   KMSK  G+ +    ++D+ G D++R+ ++   N     + + +     + 
Sbjct: 297 WVLFDDGK--KMSKSRGNVVDPNTLIDKYGVDALRYFLMREINFGSDGY-YSQELFLKRI 353

Query: 449 NPVFYVQYAYA--RCRSIFRQAKDIFPDLDFDLFPRNVIPQESE--FDTSELQLIVHLAE 504
           N      Y     R  ++  +  +             V+P E+E  F   E +L   +  
Sbjct: 354 NSDLANDYGNLWHRITTMLGKYFN------------GVLPDEAESVFGDREKELKKMVLT 401

Query: 505 YPRVIENATIAQEPYKLAFYLYDL 528
               +E+A  + + ++   Y++++
Sbjct: 402 LDANVESALDSFKFHEALSYIWEV 425


>gi|308233828|ref|ZP_07664565.1| valyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943802|ref|ZP_08241267.1| valine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491771|gb|EGF23545.1| valine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 895

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 77/193 (39%), Gaps = 24/193 (12%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKEN 449
           L +DG   +MSK  G+ +    ++D+ G+D++R+ +L     ++ + FD    K+  +  
Sbjct: 519 LAKDG--SRMSKSKGNGVNPMDLIDKYGADAMRYNLLTLITTNQDVKFDAVIDKKTKQLK 576

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  A +    I+  ++ +  +L  D  P     Q  E           L+    V+
Sbjct: 577 ESPRTDQARSFITKIWNASRFVHMNLQ-DYVPGKPCAQTMED-------AWMLSRLAAVV 628

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQA-NNRKLTMMRLQLVH 564
           +  T   E Y    Y  D+   F   W+       E  + R +    + KL + R  LV 
Sbjct: 629 KKTTEQLETYAFGDYARDI-QSF--FWNEVCDWYIELCKGRLLNGTADEKLQVQR-NLVF 684

Query: 565 AVASIINSGLNII 577
               ++++ L ++
Sbjct: 685 ----VLDTALRLL 693


>gi|86131042|ref|ZP_01049641.1| Isoleucyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818453|gb|EAQ39613.1| Isoleucyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 1151

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+       ++
Sbjct: 659 GVDQTRGWFYTLHAIATMIFDDVAYKNVVSNGLV---LDKNGQKMSKRLGNATDPFETLE 715

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + G D+ R+ M+   N  + L FD   ++E + K     Y  Y +    +          
Sbjct: 716 KYGPDATRWYMISNANPWDNLKFDLEGIEEVKRKFFGTLYNTYNFFALYANLDNFAFAEA 775

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +++    P       SE       LI  + ++           EP
Sbjct: 776 EIELSQRPEIDRWILSELH----SLIAEVDKF-------YAEYEP 809


>gi|297741117|emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 9/172 (5%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS +             +  +         I     N TG +H+GH   + + DT+   
Sbjct: 140 SPSAVENSWYEWWEKSGFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTSAIQDTIIRW 199

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN--------DSDLPEGYYPGVY 205
              SGY       ++ AG     +      R ++   ++        +    +  Y GV 
Sbjct: 200 RRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGRENFVSEVWNWKNEYGGVI 259

Query: 206 LKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           LK   +  A   ++ E     E++ L + + +       +I  DL+ +N   
Sbjct: 260 LKQQRRMGASLDWTRECFTMDEKRSLAVTEAFVRLYKEGLIYRDLRLVNWDC 311


>gi|255579057|ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
 gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase, putative [Ricinus communis]
          Length = 1065

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 80/263 (30%), Gaps = 21/263 (7%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS + K   +       +  +         I F   N TG +H+GH   A V DT+   
Sbjct: 99  SPSAVEKSWYAWWEKSGYFTAHAKSSKPPFTIVFPPPNVTGALHIGHALTAAVEDTIIRW 158

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN--------DSDLPEGYYPGVY 205
              SGY       ++ AG     +      R +    ++        +    +  Y G  
Sbjct: 159 RRMSGYNTLWVPGVDHAGIATQVVVEKKLMRERHLTRHDIGREQFVSEVWKWKEEYGGTI 218

Query: 206 LKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           L  + +  A   +S E     E++   +++++       +I  DL+ +N    +  +  D
Sbjct: 219 LGQLRRLGASLDWSRECFTMDEKRSKAVIEEFVRLYKEGLIYRDLRLVNWDCTLRTAISD 278

Query: 265 FHRGDPSPIRDII------DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
                       +      D     G +     P             R + +   T +  
Sbjct: 279 IEVDYTDIKEKTLLKVPGYDKPVEFGLLTSFAYPLEGDLGEIVVATTRIETMLGDTAIAI 338

Query: 319 DVDRPLLKSDGSYTYFAADLAYF 341
             D      D  Y++     A  
Sbjct: 339 HPD------DQRYSHLHGKFAIH 355


>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|187629841|sp|A4SX62|SYC_POLSQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 473

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 111/334 (33%), Gaps = 44/334 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +V D +   +  SGYEV     I D   +I           ++AL N++   
Sbjct: 37  HIGHARVMIVFDMVVRWLRASGYEVQYVRNITDIDDKI----------IKRALENSE--- 83

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P         + +    AD     L++  +E             + K+I ++L       
Sbjct: 84  PISALTN---RFIAAMHADSDELGLMHPDQEPRATDYIQQMQGMIGKLIENELA------ 134

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFR 312
                    ++G+   +   +  L R G +    L    +         ++     +L++
Sbjct: 135 ---------YQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGGGKRDPLDFVLWK 185

Query: 313 STMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGY----VK 365
           S    +  D        +G   +     A         FD  I+  G+D    +    + 
Sbjct: 186 SAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFD--IHGGGADLQFPHHENEIA 243

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + E      + ++     +   +   +      KMSK  G+F  +R V+     + VRF 
Sbjct: 244 QSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVVRFF 303

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           ML       +++   +++E        Y    + 
Sbjct: 304 MLKAHYRSPINYSDAQLEEARSGLTRLYTALTHI 337


>gi|258448031|ref|ZP_05696161.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257858721|gb|EEV81594.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
          Length = 657

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 110/352 (31%), Gaps = 82/352 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L  Q DI++ E   + G  S   +          VY                    +L+ 
Sbjct: 112 LLKQGDIYLGE---YEGWYSVPDETY--YTESQLVYPQYENGKIIGGKSPDSGHEVELVK 166

Query: 312 RSTMV---GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD- 350
             +         DR L   D +  +                   ADLA  +  +  G   
Sbjct: 167 EESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHV 226

Query: 351 -----NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                +++YV                 D S + +   A    ++++  + + ++  ++ +
Sbjct: 227 PSNPKHVVYVWIDALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLM 286

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 287 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|300771569|ref|ZP_07081444.1| glutamate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761558|gb|EFK58379.1| glutamate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 508

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 40/229 (17%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYIN 168
             +V + F + +PTG +H+G  R A+     A       ++     + TR     E YIN
Sbjct: 4   QKRVRVRF-APSPTGGLHLGGVRTALFNYLFARQHQGEFILRIEDTDQTRFVPGAEEYIN 62

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           +  A    +              ++S   EG Y G Y +   K    +Y+ +L+      
Sbjct: 63  ECLAWCGIV-------------PDESPSKEGAY-GPYRQSERKPSYRQYAEQLVE----- 103

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVY 287
                K ++  A       D +     +  +  E+  +  +   +  ++   L  +G+ +
Sbjct: 104 -----KGFAYYAFDTAEELDEQRKIQPNFRYSHENRMNLRNSLSLPAEVTQQLLAEGHSH 158

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              +  P+ +T    DM R ++ F + +V    D+ LLK+DG  TY  A
Sbjct: 159 TIRIKMPQDETVSFEDMIRGRVSFETGLVD---DKVLLKADGMPTYHLA 204


>gi|57234777|ref|YP_181174.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|90103540|sp|Q3Z9C5|SYV_DEHE1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57225225|gb|AAW40282.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 880

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 54/191 (28%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K      +    +  N         I     N TG +H+GH   A + D +        
Sbjct: 20  EKKWYQYWMEKGYFKPNPDSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIR------ 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                             L     W            LP   + G+  + V + +  K  
Sbjct: 74  --------------WHRMLGEPALW------------LPGADHAGIAAQVVVERMLAKQG 107

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   E +L  + ++ V    + IR     L    D          G    +R+I  
Sbjct: 108 KTRQELGRELFLEKMWEW-VNPCRERIRHQHMRLGASCDWDRETFTLDPGPVKAVREIFT 166

Query: 279 NLARQGYVYEG 289
           NL ++G +Y G
Sbjct: 167 NLYQKGLIYRG 177


>gi|15674035|ref|NP_268210.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492710|ref|YP_003354690.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|30173209|sp|Q9CDZ7|SYE_LACLA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|12725104|gb|AAK06151.1|AE006435_9 glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281376367|gb|ADA65857.1| Glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 483

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 104/307 (33%), Gaps = 54/307 (17%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  RE ++ D 
Sbjct: 2   NKKIRVRY-APSPTGLLHIGNARTALFNYLFARHHGGDFIIRI-----EDTDRERHVEDG 55

Query: 171 GA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP 225
              Q+  L      R+    ++   +  E Y        Y K++ + L +  +      P
Sbjct: 56  ERSQLENL------RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLTEGKAYYSYKTP 109

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           EE      K  +       I +     + +   +I+E      +P  +R  +D       
Sbjct: 110 EELEADHAKQEAAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEP-VVRISVDE------ 162

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                         +  D+ +  + F    +G   D  + K DG  TY   + A     +
Sbjct: 163 ----------KAIYKWNDIVKGDIEFEGKNIG--GDWVIQKRDGYPTY---NFAVVVDDH 207

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    ++I   G DH     +   V  A+  +  Q       +  +       K+SKR  
Sbjct: 208 DMQISHVIR--GDDHIANTPKQLVVYDALGWEAPQFGH----MTLIINSETGKKLSKRDT 261

Query: 406 DFITLRH 412
           + +    
Sbjct: 262 NTLQFIE 268


>gi|303389056|ref|XP_003072761.1| valyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301903|gb|ADM11401.1| valyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 924

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 53/190 (27%), Gaps = 38/190 (20%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +         +   +    I    K  I     N TG +H+GH     + DTL       
Sbjct: 54  IEGKWYEFWENNELF--KPIEGKEKYVIPIPPPNVTGNLHIGHAMMVSIQDTLCRYKRMC 111

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GYEV      + AG  I T  + +    ++ + ++     +             E  DK+
Sbjct: 112 GYEVLYIPGTDHAG--IATQNVVLKQLEREGVVSDREGFLKK----------AWEWKDKH 159

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            S                         I +  K L    D          G    + D  
Sbjct: 160 GSR------------------------IYEQFKRLGTSVDFSRERFTLDPGMNEAVVDAF 195

Query: 278 DNLARQGYVY 287
             L  +G +Y
Sbjct: 196 VKLYERGLIY 205


>gi|222823730|ref|YP_002575304.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538952|gb|ACM64053.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 629

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 65/473 (13%), Positives = 142/473 (30%), Gaps = 76/473 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ DTLA      G +       ++ G +I   A +  +  ++      +  
Sbjct: 16  HIGHAYTTIIADTLARFYRLQGEKTFFLTGTDEHGQKIEQAASAKNFTPKEYADEISTKF 75

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-- 254
            + +        +  +   + + E      +K    + D        I +   +      
Sbjct: 76  KKLW----DEFEISYDYFIRTTDENHKLSVQKAFKKMFDKG-----DIYKGTYEGFYCVS 126

Query: 255 --------------------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                               +    + E+ +          I+     +  +        
Sbjct: 127 CESYFTQTQLINECHCPDCGKKTQLLKEESYFFKLSKYQDQILKWYKEKEPILPKNKANE 186

Query: 295 KSKTTQKCDMDRKQL-------LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                +    D           +     + DD     +  D    Y +A L +   +   
Sbjct: 187 LINFVESGLKDLSITRTSFEWGIKLPKELNDDKHVVYVWLDALMNYVSA-LGWGNDEANM 245

Query: 348 GF-DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            F    I+ +G D    H+ Y     A   ++     +            +DG   KMSK
Sbjct: 246 DFWPAHIHFVGKDILRFHAVY---WPAFLMSLDLPLPKFIAAHGWW---TKDGE--KMSK 297

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +  + V D  G ++ R+ +L R+     D DF +    ++ N     +      R
Sbjct: 298 SKGNVVAPKEVADTFGLEAFRYFLL-REVPFGNDGDFSQKALIARINAELSNELGNLLNR 356

Query: 463 SI---FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
            I    + +++I    D +L+    + +  E+  + +              NA    +P 
Sbjct: 357 IIGMSAKYSQNIIDCKDVNLYFNQELNECKEYLDNAI--------------NALENIQPN 402

Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +   YL +L        ++   +    +    N ++      LV   A+I+  
Sbjct: 403 R---YLEELFKALS--LANLSISKYEPWNLIKNDQMQKAN-ALVALCANILAK 449


>gi|312794407|ref|YP_004027330.1| glutamyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181547|gb|ADQ41717.1| glutamyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 485

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 93/285 (32%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L       +      Y  +  +
Sbjct: 63  WLGIEW----DEGVEVGGPYGPYRSTERVDIYKKYVDVLFEKGYAYYC-----YCTEEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R +L +   Q   ++ +        +   +      ++G         P+       
Sbjct: 114 EGQRQELLSKG-QMPRYLGKC------RNLTEEQKRRFEQEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGDVEFMSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALGFELPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|251783358|ref|YP_002997663.1| glutamyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391990|dbj|BAH82449.1| glutamyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 482

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/449 (14%), Positives = 135/449 (30%), Gaps = 101/449 (22%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 11  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 64

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                ++    ++   +  E Y        Y K++ + LA+  + +     +E      +
Sbjct: 65  -----KWLGMDWDESPETHEQYRQSERLDLYQKYIDQLLAEGKAYKSYVTEDELAAERER 119

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     Q   +I+E +                   G V    L   
Sbjct: 120 QEAAGETPRYINEFLGMTEEQKAAYIAERE-----------------AAGIVPTVRLAVN 162

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           ++   +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 163 EAGIYKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR 217

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             G DH     +   V  A+  +          +  +       K+SKR  + +      
Sbjct: 218 --GDDHIANTPKQLMVYEALGWEAPAFGH----MTLIINSETGKKLSKRDTNTLQFIEDY 271

Query: 415 DEVG--------------------------SDSVRFMMLWRKNSELLDFD---FCKVKEQ 445
            + G                             +      R +     FD      +  +
Sbjct: 272 RKKGYMPEAVFNFIALLGWNPGGEEEIFSREQLIDLFDENRLSKSPAAFDQKKMDWMSNE 331

Query: 446 SKENPVFYVQYAYAR-----CRSIFRQAKDIFPDLDFDLFPRNVIPQES--------EFD 492
             +N  F   YA  +        +  +A+ +       L   + I   +        E  
Sbjct: 332 YLKNADFETVYALCKPFLEEACRLTEKAEKLVELYKPQLKSADEIIPLTDLFFSDFPELT 391

Query: 493 TSELQLIV------HLAEYPRVIENATIA 515
            +E +++        L  +   +E  +  
Sbjct: 392 EAEKEVMAGETVPTVLQAFKEKLEAMSDE 420


>gi|145492782|ref|XP_001432388.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399499|emb|CAK64991.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1039

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 60/214 (28%), Gaps = 36/214 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNL---IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           PS++             +       +    +  +     N TG +H+GH   + + D+L 
Sbjct: 89  PSFVESFWYKYWEDKKYFHVTAEEALKNDKRYVMVLPPPNVTGYLHLGHGLTSAIEDSLT 148

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    GY                              Y   +D        V  K + K
Sbjct: 149 RIHRQRGYATC---------------------------YLPGTDHAGIATQTVVEKALAK 181

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  +K          EK+L  V D+  +   +I+ + L+ +    D              
Sbjct: 182 QQLNK-----WEMGREKFLEKVWDWKEKHGAQIL-EQLRRVGSSLDWDRYHFTMDEQLKK 235

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L  +G +Y        S   +    D
Sbjct: 236 AVTEAFVLLYEKGLIYRATRLVNWSCQLKTAISD 269


>gi|269215454|ref|ZP_06159308.1| glutamate--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130941|gb|EEZ62016.1| glutamate--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 495

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 99/290 (34%), Gaps = 40/290 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R    N    QI        
Sbjct: 10  APSPTGKLHIGGARTAIYNWAFARATGGAFVLRIEDTDPERSTEEN---TQI-------I 59

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R  + L  +  + PE G   G Y +    E    Y+  L +            +  +  
Sbjct: 60  LRAMRWLGLDWDEGPEVGGAHGPYRQTERMET---YAHALEDLKARGAAYPC--FCTKEE 114

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +   R   +A    +  +  +      DP   R  I+  A + +V+   +P  +    + 
Sbjct: 115 LDAKRAAAEACGGAYGGY--DRACRDIDPGEARARIE--AGEPHVWRLKVPDDRG-PIEF 169

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D     + F + ++    D  L++SDG+ TY   + A        G  ++I   G DH 
Sbjct: 170 DDAVYGPMSFPADVMD---DMILVRSDGTPTY---NFAVVCDDANMGITHVIR--GDDHL 221

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+         L    + L  DG   K+SKR G      
Sbjct: 222 SNTPRQILIYEALGYAVPTFAHLS---MILGADGK--KLSKRHGATSVEE 266


>gi|238852506|ref|ZP_04642918.1| leucine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834853|gb|EEQ27078.1| leucine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 804

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 106/330 (32%), Gaps = 55/330 (16%)

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE---- 262
           KH+  +  D   +E       +WL         A  K +   L+  +     +  E    
Sbjct: 374 KHINSDFLDGLDNEEAKKKMIEWLE-----DHNAGQKKVNYKLRDWDFSRQRYWGEPIPV 428

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             +  G  S + +  D L  +      I P    ++      D   ++ ++   G     
Sbjct: 429 IHWEDGTTSLVPE--DELPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGKRETN 486

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVA 371
            +    GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V 
Sbjct: 487 TMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVL 546

Query: 372 AAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMM 426
             +     +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M
Sbjct: 547 YDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                   +D+D           P               ++  D    L  +      IP
Sbjct: 602 FMGPLDASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIP 641

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           QE   D ++ +L      Y   ++  T   
Sbjct: 642 QERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|237756707|ref|ZP_04585209.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691131|gb|EEP60237.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 621

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 96/266 (36%), Gaps = 47/266 (17%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           DI    + +  + EG           K + D   + F S +                   
Sbjct: 182 DIWFEKSAKELLPEGYKCKKCGGQEFKKEEDILDVWFDSGVS-----------------H 224

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           AA L Y + +  R   +M Y+ GSD      +   + +  S  +A  + +L     L   
Sbjct: 225 AAVLKYGEWEELRWPADM-YLEGSDQHRGWFQSSLLESVASYNRAPYDTVLTHGFTLDEK 283

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK AG+ +    V+ E G+D +R  ++    +E +   F  +K  +++      
Sbjct: 284 GR--KMSKSAGNVVAPEKVIKEYGADILRLWVVTEDYTEDIKIGFNLIKRIAED------ 335

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              Y + R+ FR       D + +   ++ +P E+  +         L++   +I+ A  
Sbjct: 336 ---YRKIRNTFRYFLGNLYDFNPN---QDYVPYENLLEIDRW----MLSKLQNIIQIADK 385

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGR 540
           + E         +    FH  +   +
Sbjct: 386 SYE---------E--GKFHKIYHTIK 400


>gi|210623150|ref|ZP_03293605.1| hypothetical protein CLOHIR_01555 [Clostridium hiranonis DSM 13275]
 gi|210153794|gb|EEA84800.1| hypothetical protein CLOHIR_01555 [Clostridium hiranonis DSM 13275]
          Length = 498

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 100/292 (34%), Gaps = 38/292 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA----QINTLALSVFW- 183
           + +PTG +H+G  R A+     A     +G E        D        I  +  ++ W 
Sbjct: 9   APSPTGFVHIGSLRTALYNYLFA---KHAGGEYILRVEDTDRTRLVDGAIENMLNAMKWA 65

Query: 184 ---RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                +  + + + ++ +    G Y++    ++  KY  ELL+  +  +        + A
Sbjct: 66  GVNHTEGVMLDENGNVTQKGEYGPYIQSERLDIYQKYIKELLDSGK-AYYCFCTKERLDA 124

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           + +  ++              E   + G       + +      G  Y   L  P+    
Sbjct: 125 VREQQKE------------AGETPRYDGHCRDLTPEEVQAKIDAGEPYVIRLRLPEDHKI 172

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  + F +  +    D+ L+K+DG  TY     A     +     ++I   G +
Sbjct: 173 TFTDLVRGDMEFNTNDLD---DQVLIKTDGFPTYHF---AVVVDDHLMKITHIIR--GEE 224

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                 +   +  A   +K  + V L  ++         K+SKR GD     
Sbjct: 225 WVSSTPKHVYLYEAFGWEKP-VFVHLPNILNT----EKKKLSKRQGDVAVED 271


>gi|170289267|ref|YP_001739505.1| glutamyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688757|sp|B1LBX4|SYE2_THESQ RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|170176770|gb|ACB09822.1| glutamyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 469

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 100/286 (34%), Gaps = 45/286 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  +  +         REY           L  
Sbjct: 7   APSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLERSEREY--------EEKLME 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W     L++   D+  G   G Y++    E+  +++  L+           K Y V 
Sbjct: 59  SLRW--LGLLWDEGPDV--GGDHGPYMQSERVEIYREHAERLVKEG--------KAYYVY 106

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  + I +  + L  +        +      +P R        +G     +      K  
Sbjct: 107 AYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPERR--REYEEKGL-RPAVFFKMPRKDY 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ + +++F++  +GD     +++S+G  TY   + A           ++I   G D
Sbjct: 164 VLNDVVKGEVVFKTGAIGDF---VIMRSNGLPTY---NFACVVDDMLMEITHVIR--GDD 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A  +       +      L  DG   K+SKR G
Sbjct: 216 HLSNTLRQLALYEAFEKAPPVFAHVS---TILGPDGK--KLSKRHG 256


>gi|17231443|ref|NP_487991.1| hypothetical protein all3951 [Nostoc sp. PCC 7120]
 gi|17133085|dbj|BAB75650.1| all3951 [Nostoc sp. PCC 7120]
          Length = 220

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 41/165 (24%)

Query: 436 DFDFCKVKEQSKENPV--FYVQYAYARCRSIFRQAK--------DIFPDLDFDLFPRNVI 485
           D D  K +  +  NP   F +QY +ARC S+   A+        +  PD    L   +++
Sbjct: 53  DRDTKKDERIATINPARLFAMQYTHARCCSLILLAQRGGLIPFREPLPDNWQGLSLGSLV 112

Query: 486 PQES-----------EFDTSELQLIVHLAEYPRVIENATIAQEPY--------KLAFYLY 526
                              +E  LI  L     V+++      P+        KL     
Sbjct: 113 STMQIPWLNSETKIRLNHPAESCLISELI---EVVDS---LIFPHDNKAMNWEKLGS--- 163

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           DL+  F   WS  R    ++       ++T  RL L+ A  +++ 
Sbjct: 164 DLSQAFTTFWSQCRIWGEVKTTL---PEVTQARLGLILATQTVLR 205


>gi|304388367|ref|ZP_07370478.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337633|gb|EFM03791.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 929

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   L L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYALVLARRLQE 700


>gi|213962388|ref|ZP_03390651.1| isoleucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955054|gb|EEB66373.1| isoleucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 1135

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 31/174 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A +V    A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 643 GVDQTRGWFYTLHAIATSVFNSVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFTTIA 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D+ R+ M+   N  + L FD   V E  ++          F+  YA          
Sbjct: 700 EYGADATRWYMISNANPWDNLKFDLEGVAEVRRKFFGTLYNTYSFFALYANT-------- 751

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYK 520
             D F   + D+ P    P+   +  SEL  LI         ++      EP +
Sbjct: 752 --DSFTYAEADI-PLAERPEIDRWILSELNTLIKE-------VDTLYADYEPTR 795


>gi|83814107|ref|YP_446150.1| valyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294508074|ref|YP_003572132.1| Valyl-tRNA synthetase [Salinibacter ruber M8]
 gi|83755501|gb|ABC43614.1| valyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294344402|emb|CBH25180.1| Valyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 901

 Score = 49.5 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 65/243 (26%), Gaps = 32/243 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +     +       +  +  G      I     N TG +H+GH     + D L  +
Sbjct: 20  DPSDIEDKWYTYWEEHGFFEADADGDADSHVIMMPPPNVTGRLHIGHALQDSIQDALTRI 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E      ++ AG                                     V  +L
Sbjct: 80  HRMKGDETLWMPGLDHAGIATQN-------------------------------AVEDDL 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +       +   E ++  V+ +  +    +I D  + L    D          G    +
Sbjct: 109 REAEGKTRHDLGREAFVERVRAWK-EEYGDLILDQKRTLGDSCDWGRQRFTMDEGFTRAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           +++   L  +G +Y G          +    D +            V  PL+ ++     
Sbjct: 168 QEVFVQLHEEGLIYRGDYLVNWDPENETALSDEEVENEEREGHLWHVQYPLVGAEDESLT 227

Query: 334 FAA 336
            A 
Sbjct: 228 IAT 230


>gi|312621499|ref|YP_004023112.1| glutamyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312201966|gb|ADQ45293.1| glutamyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 485

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L       +      Y  +  +
Sbjct: 63  WLGIEW----DEGVEVGGPYGPYRSTERVDIYKKYVDVLFEKGYAYYC-----YCTEEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R +L +   Q   +  +        +   D      ++G         P+       
Sbjct: 114 EAQRQELLSKG-QMPRYTGKC------RNLTEDQKRRFEQEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGNVEFLSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALGFELPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|260584776|ref|ZP_05852521.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157433|gb|EEW92504.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 670

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 107/353 (30%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D +       GY+       ++ G +I         +  Q    
Sbjct: 17  PSGQLHIGHAYTTVASDAMIRYKKLQGYDTYFLTGTDEHGQKI--------QQKAQEAGV 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           ++ +  +    G+               +L    +  +   ++    +    + +   + 
Sbjct: 69  SEIEFVDNIIFGI--------------QDLWKKLDVSYDDFIRTTQPRHKKSVQKI-FQK 113

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT----QKCDMDRK 307
           L    DI++ E   + G  S   +     ++   VY                +   +  +
Sbjct: 114 LMDNGDIYLGE---YEGWYSVSDEEYFTESQLVEVYRDADGKMIGGVAPSGHEVQLVKEE 170

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF- 349
              FR +      DR L   +    +                    DLA  +  ++ G  
Sbjct: 171 SYFFRMSKY---ADRLLQYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIP 227

Query: 350 -----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVR 390
                 ++IYV              GSD      R   A    + ++  + + +   ++ 
Sbjct: 228 VPNDPKHVIYVWIDALSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIML 287

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    +++  G D++R+ +L  
Sbjct: 288 MALDLPLPKKIFAHGWLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLRE 340


>gi|241888882|ref|ZP_04776188.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864558|gb|EER68934.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 666

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 118/354 (33%), Gaps = 85/354 (24%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  D L      SGY+       ++ G +I                 
Sbjct: 15  PSGNLHIGHAYTTVACDALTRYKKLSGYDTYFLTGTDEHGQKIQQ-------------KA 61

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +  + E  Y    +K +      K   E ++    K++    DY   A+ +I    ++ 
Sbjct: 62  QEKGISEQAYVDEMIKDI------KKLWEAMDINYSKFIRTTDDYHETAVAEIFDKLVEK 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      + ++++  +   +G +  GI P       +   +  + 
Sbjct: 116 GDIYLGEYKGWYSISDEEYFTETQLQEVFRD--EEGNMIGGIAPS----GNEVKLVSEEC 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAA-----------------DLAYFKCKYERG--- 348
             F+ +      DR +   D    +                    DLA  +  ++ G   
Sbjct: 170 YFFKMSKY---ADRLVKYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKV 226

Query: 349 ---FDNMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
                +++YV                 GS+   + K   A    V ++  + +V+   ++
Sbjct: 227 KSNPKHVVYVWIDALVNYITALGYATGGSE-ELFNKYWPADVQVVGKEIVRFHVIYWPIL 285

Query: 390 RLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            +  D                  KMSK  G+ +    +++  G DS R+ +L  
Sbjct: 286 LMALDLPLPKKIFAHGWLLMKDGKMSKSKGNVVDPYMLIERYGLDSARYYLLRE 339


>gi|258513470|ref|YP_003189692.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777175|gb|ACV61069.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 533

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 118/365 (32%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D+ A      GY+V                           L  
Sbjct: 15  PSDKLHIGHAYTTVAADSFARYKRMKGYDVW-------------------------FLTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +                      D++  ++    +EK    ++   V  ++   +   K 
Sbjct: 50  S----------------------DEHGQKIERTAKEKGQSPLE--YVDQIVAGFKSLWKK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---------------- 295
           L++ +D FI            ++DI   L  QG +Y+                       
Sbjct: 86  LDVSYDDFI--RTTQERHKKVVQDIFQKLYDQGDIYKAQYEGHYCTPCETFWTEYQLDAD 143

Query: 296 ----SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----------KSDGSYTYF---AADL 338
                       +  +   F+ +   D++ + +           + +   ++     ADL
Sbjct: 144 GNCPDCGRPVEILQEESYFFKMSKYADEILKYIEDNAEFIQPNSRRNEMVSFIKSGLADL 203

Query: 339 AYFKCKYERG----FD--NMIYVM-GS-------------DHSGYVKRLEAVAAAVSEKK 378
              +  ++ G    FD  ++IYV   +             D S + K   A    V +  
Sbjct: 204 CVSRTTFDWGIQVPFDPKHVIYVWVDALTNYISALGYGTGDDSLFRKYWPADMHLVGKDI 263

Query: 379 AQINVLLCELVRLYRDGM--------------PIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + ++  ++ +                     KMSK  G+ +    + D+ G D++R+
Sbjct: 264 VRFHTIIWPIMLMAAGIELPKQVLGHGWLLLDSGKMSKSKGNVVDPLELCDKYGVDAIRY 323

Query: 425 MMLWR 429
            +L  
Sbjct: 324 YLLRE 328


>gi|291556883|emb|CBL34000.1| methionyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 642

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 102/341 (29%), Gaps = 67/341 (19%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S NP    H+GHC   V  DT+A      GY+V      ++ G +I   A        
Sbjct: 13  YPSGNP----HIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAE------ 62

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                      +G  P  Y+  +       + +  +++   +++    DY ++ + KI +
Sbjct: 63  -----------KGVTPKEYVDEIVANFKRLWETMHISYD--RFIRTTDDYHIETVQKIFK 109

Query: 247 DDLKALNIQHDIFIS-------------------------------EDDFHRGDPSPIRD 275
              +   I    +                                 E+ +          
Sbjct: 110 KLYEKGYIYKGTYKGKYCTPCESFWTESQLVDGKCPDCGREVKEANEEAYFLRLSDFADK 169

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGS 330
           I   L    Y+              K  ++   +   S   G     D      +  D  
Sbjct: 170 IEKFLTETDYLQPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDAL 229

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK---RLEAVAAAVSEKKAQINVLLCE 387
             Y +A L Y   KY   F+       +D     K   R  ++   +      + +    
Sbjct: 230 SNYISA-LGYGNEKYN-DFEKY---WPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHL 284

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               + +    KMSK  G+ +    + +  G D+VR+ +L 
Sbjct: 285 YGHGWINFNGDKMSKSKGNVVDPFVLCERYGVDAVRYQILR 325


>gi|260893945|ref|YP_003240042.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260866086|gb|ACX53192.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 512

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 134/429 (31%), Gaps = 81/429 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DT+A      GY+V      ++ G +I   A S           
Sbjct: 14  PSDRLHIGHAYTTVAADTVARFKRMEGYDVFFLTGADEHGQKIERTAKS----------- 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMMK--- 243
                 +G  P  Y+  +     + ++   +++ +     E    +V     Q + +   
Sbjct: 63  ------KGKDPQSYVDEIVASFKELWARLEISYDDFIRTTEPRHKVVAQKIFQKLYEQGD 116

Query: 244 IIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           I +   +       + F +      G        ++ L  + Y +       +     + 
Sbjct: 117 IYKSTYQGWYCTPCETFWTARQLVDGKCPDCGRPVELLQEESYFFRLSAYADRLLAYIEE 176

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM 356
             D  Q   R           +    G       DL   +  +  G    FD  ++IYV 
Sbjct: 177 HPDFIQPPARRNE-------VISFIRGG----LEDLCVSRTTFSWGIPVPFDPRHVIYVW 225

Query: 357 -------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGM------ 396
                        G++     KR   A    V +   + + ++   + +           
Sbjct: 226 IDALTNYLSALGYGTEDDERFKRYWPADVHLVGKDIVRFHAIIWPSILMALGLELPRRVV 285

Query: 397 --------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----KNSELLDFDFCKVKE 444
                     KMSK  G+ I   +++D+ G D+VR+ +L       + E  + +  K   
Sbjct: 286 GHGWLLVEGGKMSKSKGNVIDPHYLIDKYGVDAVRYYLLRELAFGADGEYEEKNLVKRLN 345

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               N +  + Y   R  ++  +  +  I   ++ +     +I           +L+  L
Sbjct: 346 YDLANDLGNLLY---RTLTVLEKYGEGVIGEPVEKEGPDDELIALAISTPARVAELVDQL 402

Query: 503 AEYPRVIEN 511
            +    +  
Sbjct: 403 -QLSEALAA 410


>gi|331092546|ref|ZP_08341367.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400658|gb|EGG80264.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 631

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/407 (14%), Positives = 129/407 (31%), Gaps = 64/407 (15%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +  K  +    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MENKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ +    + + E       +  +     DK+      + E++   I K   
Sbjct: 61  AEEAGVSPKEFVDGVAAQVKE-------IADMMNTSYDKFIRTTDEYHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q    I +   + +     + F +E     G        +     + Y ++      + 
Sbjct: 114 DQG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRKVQPAQEEAYFFKMSKYADRL 171

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD-- 350
                   +  Q + R   + ++   P             DL   +  ++ G    FD  
Sbjct: 172 IEHINTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDPK 221

Query: 351 NMIYVM---------------GSDHSGYVKR-LEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +++YV                  +++ +  +   A    + +   + + +   +  +  D
Sbjct: 222 HVVYVWLDALTNYITGIGYDCDGENNEFFNKNWPADLHLIGKDIIRFHTIYWPIFLMALD 281

Query: 395 G--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                             KMSK  G+ I    +V+  G D+VR+ +L            +
Sbjct: 282 LPLPKQIFGHPWLLQGDGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITW 341

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDL 479
             + E+   +    +     R  S+  +        K +  ++D DL
Sbjct: 342 ELMVERMNSDLANTLGNLVNRTISMTNKYFGGNVTDKGVTEEVDADL 388


>gi|254780802|ref|YP_003065215.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040479|gb|ACT57275.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 869

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
             S+   S I    N   K     +E     P+G +H+GH R  V+GD +A  M  SGY 
Sbjct: 15  WQSAWYDSNIFKAENGKNKKKYFVLEMF-PYPSGNIHMGHLRNYVIGDVVARFMRASGYS 73

Query: 161 V 161
           V
Sbjct: 74  V 74


>gi|169824241|ref|YP_001691852.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831046|dbj|BAG07962.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 666

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 110/338 (32%), Gaps = 65/338 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    ++ DTL       GY+V      ++ G ++          Y++A   
Sbjct: 17  PSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKL----------YEKAKEK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMK--IIR 246
           N  D P  Y     +    K+L  K        +   ++     V++   +   K  I +
Sbjct: 67  NMGDNPLNYI--DPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDIYK 124

Query: 247 DDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY------EGILPPPKSKTT 299
              K    +  + F +E     G        +     + Y +      + IL   K    
Sbjct: 125 STYKGHYCVDCEAFWTESQLKDGKCPDCGRDVHYHEEESYFFRLSKYKDRILQLYKDNPD 184

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM- 356
                 RK  +  + + G+  D  + ++             F    +  FD  ++IYV  
Sbjct: 185 FLKPESRKNEMVNNFLSGELEDLSVSRTS------------FDWGVKVPFDDKHIIYVWI 232

Query: 357 ------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------- 395
                       G D   + K        V ++  + + ++   + +  D          
Sbjct: 233 DALSCYLTGIGYGQDEELFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAH 292

Query: 396 -----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                   KMSK  G+      ++D  G D++++ +L 
Sbjct: 293 GWILFNEDKMSKSKGNVYYPEPIIDLYGVDALKYYILR 330


>gi|146296917|ref|YP_001180688.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166200200|sp|A4XKR2|SYI_CALS8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145410493|gb|ABP67497.1| Isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 920

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 25/182 (13%)

Query: 354 YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     A A   +     VL    V    DG   KMSK  G+ I+   
Sbjct: 558 YLEGNDQYRGWFQSSLLTAVATKGRAPYRIVLTHGFVV---DGEGKKMSKSEGNVISPFD 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++E G+D +R   +    +  +      +K+ ++          Y + R+  R      
Sbjct: 615 IINEFGADILRLWCVSADYTTDMRISKDIIKQLTEI---------YRKIRNTARFLLGNL 665

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS 530
            D +      + +  E+  +  +  L   L +    +  A           Y  +Y L  
Sbjct: 666 YDFN---PKTDKVGCENLKEIDKWAL-QRLYKLIEKVTKAYEEY------DYNQVYHLVH 715

Query: 531 VF 532
            F
Sbjct: 716 NF 717


>gi|303234887|ref|ZP_07321512.1| methionine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494005|gb|EFL53786.1| methionine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 666

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 110/338 (32%), Gaps = 65/338 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    ++ DTL       GY+V      ++ G ++          Y++A   
Sbjct: 17  PSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKL----------YEKAKEK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMK--IIR 246
           N  D P  Y     +    K+L  K        +   ++     V++   +   K  I +
Sbjct: 67  NMGDNPLNYI--DPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDIYK 124

Query: 247 DDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY------EGILPPPKSKTT 299
              K    +  + F +E     G        +     + Y +      + IL   K    
Sbjct: 125 STYKGHYCVDCEAFWTESQLKDGKCPDCGRDVHYHEEESYFFRLSKYKDRILQLYKDNPD 184

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM- 356
                 RK  +  + + G+  D  + ++             F    +  FD  ++IYV  
Sbjct: 185 FLKPESRKNEMVNNFLSGELEDLSVSRTS------------FDWGVKVPFDDKHIIYVWI 232

Query: 357 ------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------- 395
                       G D   + K        V ++  + + ++   + +  D          
Sbjct: 233 DALSCYLTGIGYGQDDELFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAH 292

Query: 396 -----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                   KMSK  G+      ++D  G D++++ +L 
Sbjct: 293 GWILFNEDKMSKSKGNVYYPEPIIDLYGVDALKYYILR 330


>gi|291519933|emb|CBK75154.1| valyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 848

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L   L         +   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYDPKGLEDRLYKKWEENGYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+   +D          ++H+ K
Sbjct: 67  RYKRMQGYS---------------------------ALWQPGTDHAAIATEVKVIEHLKK 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  +K      +   E +L    ++  +   +II   LK +    D          G   
Sbjct: 100 QGIEKD-----SLGREGFLEKCWEWKDEYGTRIINQ-LKKMGSSADWERERFTMDEGCSK 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L ++GY+Y+G
Sbjct: 154 AVENVFVKLYKEGYIYKG 171


>gi|288553142|ref|YP_003425077.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544302|gb|ADC48185.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 921

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 105/327 (32%), Gaps = 69/327 (21%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           +AD     L    + +W+P   +  +  M++  R D      +A  +   +F  E     
Sbjct: 415 IADFRDELLQAINDVEWIPSWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYGE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + ID                   +  + EG             +MD   + F 
Sbjct: 470 GEPIITDETIDHVSALFREHGSNIWFEWDTKELLPEGFTSEHSPNGEFTREMDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDH-SGYVKRLEA 369
           S               GS        A  + + E  R  D  +Y+ GSD   G+     +
Sbjct: 530 S---------------GSSH-----QAVLEERAELARPAD--LYLEGSDQYRGWFNSSLS 567

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            + AV+ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +   
Sbjct: 568 TSVAVTGKAPYKGVLSHGF---ALDGQGRKMSKSVGNVVVPNDVMKQLGADILRLWVASV 624

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                +     K+ +Q  E        +Y + R+ FR       D D  +        + 
Sbjct: 625 DYQSDVRVS-DKILKQVSE--------SYRKIRNTFRFLLGNLHDFDPAVNRVKNEDLDG 675

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQ 516
                    +  L +   VIE    A 
Sbjct: 676 VH-------LFMLVKLNEVIEKVKDAY 695


>gi|121997481|ref|YP_001002268.1| valyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588886|gb|ABM61466.1| valyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 917

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 71/237 (29%), Gaps = 28/237 (11%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS +   L  +   G  +  +  G    + I     N TG +H+GH     V D L 
Sbjct: 4   TYDPSAIESRLYELWEQGGHFAPSGEGSPYCIMI--PPPNVTGTLHMGHAFQDTVMDALV 61

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G+    +   + AG   Q+      V  R  +A   +  DL             
Sbjct: 62  RYHRMDGHNTLWQPGTDHAGIATQM------VVERQLEAEGLSRHDL-----GRERFLER 110

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             +   +    + N        +        M + + +   A+         ED  +RG+
Sbjct: 111 VWQWKAESGGTIQNQLRRMGASVDWRRERFTMDEGLSE---AVTEVFVRLYEEDLLYRGE 167

Query: 270 -----PSPIRDIIDNL-----ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                   +   + +L       QG+++  + P      +      R + +   T V
Sbjct: 168 RLVNWDPVLHTAVSDLEVVSAEEQGHIWHMVYPLADGSGSVVVATTRPETMLGDTAV 224


>gi|146279117|ref|YP_001169276.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557358|gb|ABP71971.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 987

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 60/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     ++  +   +G         +     I     N TG +H+GH     + D L   
Sbjct: 9   AAEAEARLYDTWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG     +                               V +EL
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQMV-------------------------------VEREL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A            E +L  V ++  Q+    I + LK L    D   +           +
Sbjct: 98  AKAGQPGRREMGREAFLSKVWEWKEQSG-GTIVNQLKRLGASCDWSRNAFTMDANFQRAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G++Y G          +    D +
Sbjct: 157 LKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLE 190



 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +     V +  LV   RD    KMSK  G+
Sbjct: 593 TGFD-IIFFW-------VARMMMMQLAVVNEVPFKTVYVHALV---RDEKGKKMSKSLGN 641

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 642 VLDPLELIDEFGADAVRFTL 661


>gi|300853381|ref|YP_003778365.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433496|gb|ADK13263.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 644

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 135/418 (32%), Gaps = 71/418 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D LA     +GY+V      ++ G +I  LA        +A   
Sbjct: 15  PSAKLHIGNTYTTVAADALARFKRLTGYDVMLLTGTDEHGQKIQRLA--------EAKGV 66

Query: 192 NDSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
              +  +    G+        +  DK+     ++  +    I K    Q    I +   +
Sbjct: 67  TPIEYVDEIVAGIKKLWDMMNISYDKFIRTTEDYHVKAVQKIFKKLYDQG--DIYKGSYE 124

Query: 251 ALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            L     + F +E     G        ++    + Y ++     PK     +   D  Q 
Sbjct: 125 GLYCTPCESFWTETQAADGKCPDCGRPVEKTKEEAYFFKMSKYAPKLIKYIEDHPDFIQP 184

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVMGSDHSGY 363
             R   + ++  RP             DL   +  +  G    FD  ++IYV     + Y
Sbjct: 185 ESRKNEMLNNFLRP----------GLQDLCVSRTSFNWGIPVTFDEKHVIYVWIDALANY 234

Query: 364 VKR--------------LEAVAAAVSEKKAQINVLLCELVRLYRDGMPI----------- 398
           +                  A    V +   + + +    + L   G+P+           
Sbjct: 235 ITALGYGSKNEELYNKYWPADVHLVGKDILRFHTIYWP-IMLMALGLPVPKKVFGHGWLL 293

Query: 399 ----KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    +VD  G+D+VR+ +L          F+     ++   +    
Sbjct: 294 VDGGKMSKSKGNVVDPVVLVDNFGADAVRYYLLREIPFGSDGLFNNEIFIKRINADLAND 353

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +    +R  ++  +         FD   +    +E   D    +LI    E P  +E 
Sbjct: 354 LGNLLSRTCAMVEKY--------FDGVVQEPTKKEQIDD----ELIKLALETPEKVEK 399


>gi|317123001|ref|YP_004103004.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592981|gb|ADU52277.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 897

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N +   +  +K        G+ +      +     +E     P+G +H+GH R   +GD 
Sbjct: 8   NFH---AAEKKWRQRWAEEGLYHVEADPSRPKFYCLEMY-PYPSGKLHMGHVRNYSIGDA 63

Query: 150 LASLMAFSGYEV 161
            A  +   GY V
Sbjct: 64  TARFLRMRGYNV 75


>gi|148989886|ref|ZP_01821169.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924671|gb|EDK75756.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 486

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 100/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL           K Y  +
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLLAEG-----KAYKSYVTE 109

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKT 298
             +   R+  + +  +   +I+E   + G     +   I      G +    L   +S  
Sbjct: 110 EELVAERER-QEVAGETPRYINE---YLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|304385268|ref|ZP_07367613.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328475|gb|EFL95696.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 887

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +      V    +  N   K    +I     N TG +H+GH     + D L    
Sbjct: 13  PQKVEQGRYQEWVEKGLFKPNGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY+             ++   ++   + +  L             GV    +G+   
Sbjct: 73  RMQGYDTV-------WVPGMDHAGIATQAKVEAKLRE----------QGVSRYDLGR--- 112

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK+  ++  + +E                 I      + +  D          G    +R
Sbjct: 113 DKFIDKVWEWKDE-------------YADTIHQQWAKMGLSLDYGRERFTLDEGLSKAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 160 KVFVTLYNEGLIYRGEYIINWDPQARTALSD 190



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 104/309 (33%), Gaps = 59/309 (19%)

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K     LA++ + + +NF  E++    K +   A   +I   L     Q   +       
Sbjct: 375 KLAKMSLANQDTDDKVNFIPERFEHTFKQWMENAHDWVISRQLW-WGHQIPAWYH----- 428

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                            G VY G    PK     + D D     F S +           
Sbjct: 429 --------------KETGEVYVGE-EAPKDVENWEQDPDVLDTWFSSALWPFTTM----- 468

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVL 384
             G     AAD       ++R F     V G D   +      +  ++    K+   +VL
Sbjct: 469 --GWPDENAAD-------FKRYFPTSTLVTGYD-IIFFWVARMIFQSLKFTGKRPFKDVL 518

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
           L  L+   RD    KMSK  G+ I    V+D+ G+D++R+ +     + + L F + K+ 
Sbjct: 519 LHGLI---RDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAGQDLRFSYTKMD 575

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                        A+     I       +  ++ D   +  +P  +E + ++  +   L+
Sbjct: 576 A------------AWNFINKI--WNASRYVIMNLDQVDKPQLPALNELNLADRWI---LS 618

Query: 504 EYPRVIENA 512
                +E  
Sbjct: 619 RLNHTVEQV 627


>gi|157960729|ref|YP_001500763.1| valyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157845729|gb|ABV86228.1| valyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 971

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQNWEEKGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      +   E ++  + D+  Q+   I +  L+ L    D          G   
Sbjct: 93  KVAAEEGLSRHDLGRENFIDRIWDWKEQSGGTITKQ-LRRLGASVDWDRERFTMDEGMSD 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G        T      D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPTLHTAISDLE 187


>gi|29375514|ref|NP_814668.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971380|ref|ZP_05421966.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255973998|ref|ZP_05424584.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617799|ref|ZP_05474645.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761684|ref|ZP_05502264.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854227|ref|ZP_05559591.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256957214|ref|ZP_05561385.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960056|ref|ZP_05564227.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964250|ref|ZP_05568421.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257077814|ref|ZP_05572175.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257083841|ref|ZP_05578202.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257089340|ref|ZP_05583701.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418524|ref|ZP_05595518.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257421174|ref|ZP_05598164.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294780517|ref|ZP_06745880.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300859824|ref|ZP_07105912.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|38258306|sp|Q837B3|SYM_ENTFA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29342974|gb|AAO80738.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962398|gb|EET94874.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255966870|gb|EET97492.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597326|gb|EEU16502.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682935|gb|EEU22630.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256709787|gb|EEU24831.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256947710|gb|EEU64342.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256950552|gb|EEU67184.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954746|gb|EEU71378.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256985844|gb|EEU73146.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256991871|gb|EEU79173.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256998152|gb|EEU84672.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160352|gb|EEU90312.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162998|gb|EEU92958.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294452344|gb|EFG20783.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300850642|gb|EFK78391.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|323480110|gb|ADX79549.1| methionyl-tRNA synthetase/Methionine--tRNA ligase, MetRS
           [Enterococcus faecalis 62]
          Length = 669

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 66  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 112

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 113 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 170 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 227

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 228 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 288 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|295113880|emb|CBL32517.1| methionyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 669

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 66  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 112

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQ 308
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++ +++
Sbjct: 113 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 169

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF-- 349
             F    +    DR +   +    +                    DLA  +  +  G   
Sbjct: 170 SYF--FRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPL 227

Query: 350 ----DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL 391
                +++YV              GS+     ++   A    V ++  + + +   ++ +
Sbjct: 228 KNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLM 287

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 288 ALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|307730435|ref|YP_003907659.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307584970|gb|ADN58368.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 973

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ S+    +                +  G G   +I+    N TG +H+GH     + 
Sbjct: 25  TLAKSFEPHTIEAHWGPEWEKRAYAAPSFNGNGKDFSIQLPPPNVTGTLHMGHAFNQTIM 84

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 85  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 112

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I + ++ L    D          
Sbjct: 113 IVVERQLDAKGVSRHDLGREKFVERVWEWKQQSG-STITNQVRRLGASIDWSREYFTMDD 171

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 172 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 222


>gi|213963915|ref|ZP_03392161.1| glutamyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953424|gb|EEB64760.1| glutamyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 500

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 100/289 (34%), Gaps = 44/289 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAF--SGYEVTREYYINDAGAQINTL 177
           + +PTG +H+G  R A+          GD L  +     + Y    E YI ++   +   
Sbjct: 7   APSPTGALHIGGVRTALFNYLFAKKHGGDFLLRIEDTDQNRYVPGAEQYIINSLNWLGL- 65

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D  + +      Y +   K L  +Y+  L+   E  W     D +
Sbjct: 66  -------------TYDEGVGKEGKHAPYRQSERKPLYKQYADALI---ENGWAYYAFDTA 109

Query: 238 VQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
               + I R + +A        + + D           ++   L R G  Y      P +
Sbjct: 110 --EALDIARKEAEAKGETFIYNWATRDTLQNSLSLSAEEVQQRLQR-GDEYVIRFKMPHN 166

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  DM R ++   ++ +    D+ L KSDG  TY    LA     +     ++I   
Sbjct: 167 EQLKMNDMIRGEVTIDTSTLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR-- 218

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G +    +     +  A   +       L  +++   +G   K+SKR G
Sbjct: 219 GEEWLPSMALHLMLYRAFGWQAPAFAH-LPLILKPVGNG---KLSKRDG 263


>gi|113954820|ref|YP_732013.1| valyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113882171|gb|ABI47129.1| valyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 914

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +   +G    +     N TG +H+GH     + DT+      +G
Sbjct: 14  EARWQKAWEDEGAFHPDPAAEGEPFAVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++   +  
Sbjct: 74  KNVLC--------------------------------LPGTDHASIAVQTILEKQLKEEG 101

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L     +  ++  + I D L+ L    D          G    +++   
Sbjct: 102 KTRHDLGREAFLERAWQWKAESGGR-IVDQLRRLGYSVDWQRQRFTLDEGLSEAVKEAFV 160

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 161 RLHEQGLIYRGEY 173



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 91/292 (31%), Gaps = 26/292 (8%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +  + +   F  E+W  + +D+        I   L     +   +    +          
Sbjct: 373 EALAQQDPRFIPERWEKVYRDWLTDIRDWCISRQLW-WGHRIPAWFVISETGGKYTDTTP 431

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++     +           +++  Q  D D     F S +             G     
Sbjct: 432 YVVARDEAEALAKAQEQFGAEARIEQ--DEDVLDTWFSSGLWPFSTL-------GWPDAN 482

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           AADL   Y       GFD +I+         V R+  +A A + +    +V +  LV   
Sbjct: 483 AADLQRWYPTSTLITGFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV--- 531

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK AG+ I    +++  G+D++RF ++        D      +++     V 
Sbjct: 532 RDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKKDTSATVE 591

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             +    +  +  R A                +      D     ++  LA 
Sbjct: 592 ASRNFANKLWNATRFALMNLGGATPAELGEPEVSALRLAD---RWILSRLAR 640


>gi|282899565|ref|ZP_06307529.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195444|gb|EFA70377.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 488

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 100/323 (30%), Gaps = 49/323 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +V D +   + F GY V                      RY Q   + D  +
Sbjct: 38  HLGHARACIVWDVVRRYLEFIGYRV----------------------RYIQNFTDIDDKI 75

Query: 197 PEGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                        V +     Y  ++      +     +       +K +  DL+     
Sbjct: 76  LNRARKENSTMETVAERYIQAYFEDMGRLGVREADEYPRATHTMNGIKRLIQDLEVRGYA 135

Query: 256 H----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +    D++ +   F+       R  + +L         I  P   K     D     L  
Sbjct: 136 YPADGDVYYAVRKFNEYGKLSGRK-LADLQAGASERVNIEDPEYQKKKDPFDF---ALWK 191

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKR 366
            +       + P  K  G   +     A  + +     D  I+  G+D     H   + +
Sbjct: 192 AAKPCEPAWESPWGK--GRPGWHIECSAMVRDRLGDTID--IHAGGADLIFPHHENEIAQ 247

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFM 425
            EAV       K   N  L   +         KMSK  G+F T+R ++D  V   ++R  
Sbjct: 248 SEAV-----TGKPLANYWLHNGMVKVDG---EKMSKSLGNFTTIRDLLDRGVDPMALRLF 299

Query: 426 MLWRKNSELLDFDFCKVKEQSKE 448
           +L  +  + LDF    +   +  
Sbjct: 300 VLMAQYRKPLDFTEEAILAATNG 322


>gi|326201136|ref|ZP_08191008.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988704|gb|EGD49528.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 883

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 68/267 (25%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    +    +            I     N TG +H+GH     + D L   
Sbjct: 12  DPGQVEDRLYKKWMDEGYFHAVPDKNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRT 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +   AL  +   + +             E 
Sbjct: 72  KRMQGYSAL-------WLPGTDHASIATEAKIVDALAKDG--ISKDMLGREKFLEKAWEW 122

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
              Y                           I + LK L    D          G    +
Sbjct: 123 RKIYGGR------------------------IVEQLKKLGSSCDWERERFTMDEGLSKAV 158

Query: 274 RDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           +++   L  +G +Y+G            S +  + + + +   F        D D  ++ 
Sbjct: 159 QEVFLKLYDKGLIYKGERITNWCPKCNTSISDIEVEYEEQAGNFWHIKYPVKDSDEFVII 218

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + ++I
Sbjct: 219 ATTRPETLLGDTAVAVNPEDERYTHLI 245


>gi|222085012|ref|YP_002543541.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221722460|gb|ACM25616.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 960

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 34/266 (12%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD------DVDRPLLKSDGSYTYFAADLA 339
           V   IL    ++       +  +  F      +      D+      S  ++T+   D  
Sbjct: 523 VNARILEAFDAEGADAWFAEGARERFLGEKANEPWTQVMDILDVWFDSGSTHTFTLED-- 580

Query: 340 YFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               + +  +   +Y+ GSD   G+       +AA   +     VL         D    
Sbjct: 581 ----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYDAVLTHGFTM---DEKGE 633

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+  + + V+ + G+D +R  ++    +E  D    K   Q+  +       AY
Sbjct: 634 KMSKSKGNVTSPQEVMKDAGADILRLWVMTSDYAE--DLRVGKAIIQTNVD-------AY 684

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQE 517
            + R+  R           ++     +P+         QL++H LAE   ++  +  A +
Sbjct: 685 RKLRNTIRWMLGTLAHDKGEVIAYADMPELE-------QLMLHRLAELDELVRESYDAFD 737

Query: 518 PYKLAFYLYDLAS-VFHGHWSHGREN 542
             ++A  L D ++      +   R++
Sbjct: 738 FKRIARALIDFSNVELSAFYFDVRKD 763



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 14/176 (7%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY+     Y+         +   +  +Y++  
Sbjct: 64  PYANGNIHIGHALNKILKDVITRSFQMRGYDS---NYVPGWDCHGLPIEWKIEEKYREKG 120

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +           +        +   E K L IV D+    +M     + 
Sbjct: 121 KNKD-EVPVNEFRQECRDFAAGWIK-------IQSEEFKRLGIVGDFDNPYLMMNFHAE- 171

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILPPPKSKTTQKCD 303
             +  +          +RG    +  +++   LA     Y  +            +
Sbjct: 172 SRIAGELLKIAKTGQLYRGSKPVMWSVVERTALAEAEVEYADVESDMIWVKFPVVE 227


>gi|212697050|ref|ZP_03305178.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675825|gb|EEB35432.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 875

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 74/266 (27%), Gaps = 40/266 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P    K +      G  +   +        I     N TG +H+GH     + D +    
Sbjct: 7   PQKFEKDIYKKWEDGGYFKARVNKDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYK 66

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYE          G    +++       +        D                   
Sbjct: 67  RMQGYEACWIP-----GTDHASISTEAKVVGKIKSEGKSKD------------------- 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       +K+L    D+  +     I+  L+ + +  D         +     +R
Sbjct: 103 --------ELGRDKFLKECWDW-TEEYGGTIKKQLRTVGVSCDWDRDSFTMDKNLTRAVR 153

Query: 275 DIIDNLARQGYVYEG---ILPPPKSKT----TQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +   G +Y G   +   P++KT     +    D++  L+      +D D  +  +
Sbjct: 154 KVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIKYFFEDSDEYITIA 213

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
                    DLA      +  F + I
Sbjct: 214 TTRPETMLGDLAVAVNPEDERFKDKI 239


>gi|163785456|ref|ZP_02180059.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879275|gb|EDP73176.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 436

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 65/314 (20%), Positives = 103/314 (32%), Gaps = 40/314 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R  +V D +   + + GY V               +   +  R +         L
Sbjct: 38  HVGHGRSLIVFDMIRRYLRYLGYNVK-------FVRNFTDVDDKIINRAKNEC------L 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P       Y+K    + A+ +  E  +        I     +  + K+I     A  ++ 
Sbjct: 85  PFTVIADRYIKEY-FQDAENFRIEPADVEPRVTTHIPD--IIDFIQKLIDKGY-AYEVEG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ S   F        +  +D L        G    P  K     D     L   S   
Sbjct: 141 DVYFSVRKFKDYG-KLSKRSVDELIA------GARVEPGEKKKDPLDF---ALWKASKAG 190

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAA 373
               D P  K  G   +     A       +     I + G          E   A A A
Sbjct: 191 EPAWDSPWGK--GRPGWHTECCAMIF----KHLGETIDIHGGGLDLTFPHHENELAQAEA 244

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +SEK      +   LV +       KMSK  G++ITL+ +  +   D +R ++L      
Sbjct: 245 LSEKPFARYWIHNGLVTV----NGQKMSKSLGNYITLKEIYSKYEPDILRLLVLSVHYRS 300

Query: 434 LLDFDFCKVKEQSK 447
            LDF + K++E  K
Sbjct: 301 PLDFSWEKMEETKK 314


>gi|15895665|ref|NP_349014.1| valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81529863|sp|Q97GG8|SYV_CLOAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15025413|gb|AAK80354.1|AE007740_1 Valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509815|gb|ADZ21451.1| valyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 881

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 52/198 (26%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P      +         +   +        I     N TG +H+GH     + D + 
Sbjct: 10  TYDPKEFEDRIYKWWEEEGFFTPKVDKNKKPYTIMMPPPNITGKLHLGHALDCALQDFMI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE              +  +++   R ++ +                      
Sbjct: 70  RAKRMQGYEAL-------WLPGQDHASIATEVRVEKEIL--------------------- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K          EK+L  V D+  +   + I+   K L +  D              
Sbjct: 102 ----KEGLNKKEMGREKFLERVWDW-TKEYRERIKGQQKKLGVSADFTRESFTMDEKLNK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R +   L   G +Y+G
Sbjct: 157 AVRTVFVKLYEDGLIYQG 174



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
               ++      +  L RD    KMSK  G+ +    V+D  G+D++RFM++     
Sbjct: 504 YNMGEVPFKHVYIHGLVRDAEGRKMSKSLGNGVDPLDVIDTFGADALRFMLITGNAP 560


>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 921

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 110/328 (33%), Gaps = 66/328 (20%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  S  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRSDLLDAIKETKWVPEWGEQRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                   +  + EG   P     T   + D   + F 
Sbjct: 470 GEPIITDETIEHVSELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDH-SGYVKRLEA 369
           S               GS        A  + + +  R  D  +Y+ GSD   G+     +
Sbjct: 530 S---------------GSSH-----QAVLEEREDLVRPAD--LYLEGSDQYRGWFNSSLS 567

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            A AV+ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +   
Sbjct: 568 TAVAVTGKAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSV 624

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                +      +K+ ++          Y + R+ FR       D D      N +  E 
Sbjct: 625 DYQADVRVSDAILKQVAE---------VYRKIRNTFRFLHGNLFDFD---PKTNAVAVED 672

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQE 517
             +  +  LI  L +    ++ A    E
Sbjct: 673 LREVDQYMLIK-LNKLIDKVKKAYDEYE 699


>gi|291278499|ref|YP_003495334.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753201|dbj|BAI79578.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 60/412 (14%), Positives = 126/412 (30%), Gaps = 75/412 (18%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V  D LA      GY+V      ++ G +I   A                  
Sbjct: 20  HIGHAYTTVAADVLARYKRLCGYDVFFLTGTDEHGQKIEQAAQ----------------- 62

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+  K +   + +++ S  +              + +   K ++   K +    
Sbjct: 63  ----KKGITPKELADTVVERFKSLWVKLNISN--DKFIRTTDEEHKKTVQKIFKKMQENG 116

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD--MDRKQLLFRST 314
           DI++ E +     P         L    +         K K           +  L +  
Sbjct: 117 DIYLGEYEGWYCTPCETYWTETQLLDGNHCPSCGRETHKLKEPSYFFKMSKYQNELLKYI 176

Query: 315 MVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERGF------DNMIYVM-GS------ 358
               D  +P  + +   ++      DL+  +  ++ G       +++IYV   +      
Sbjct: 177 QENPDFIQPTSRKNEIVSFIKEGLKDLSVSRVSFKWGIPVPGDENHVIYVWIDALTNYIS 236

Query: 359 ------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------------MPI 398
                 +   + K   A    V +   + + +    + +                     
Sbjct: 237 AIGYLDETKQFKKYWPADVHLVGKDILRFHTVYWPTMLMSAGLPLPKKVFAHGWWTVEGQ 296

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-DFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ I    +VD  G D++R+ +L      L  DF F  +  +   +    +   
Sbjct: 297 KMSKSLGNAIDPNWLVDTFGVDAIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGNL 356

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE-YPRV 508
             R   + ++  +             +IP+    D ++ +L+  + E +  V
Sbjct: 357 LNRTMGMVKRYFN------------GIIPEYKVEDETDKELLAKIEEVFDEV 396


>gi|262383767|ref|ZP_06076903.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301311939|ref|ZP_07217861.1| glutamate--tRNA ligase [Bacteroides sp. 20_3]
 gi|262294665|gb|EEY82597.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300830041|gb|EFK60689.1| glutamate--tRNA ligase [Bacteroides sp. 20_3]
          Length = 505

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 102/294 (34%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G ++     I D  +Q    
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQNGGDMILR--IEDTDSQ--RF 52

Query: 178 ALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                    +AL        E    G   G Y +   +E+  KY  +LLN          
Sbjct: 53  VPGAEDYIIEALTWLGIKFDEGVSFGGNYGPYRQSERREIYKKYVDQLLNDG-----HAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +   A ++  R ++     Q+D   S     R   +   + + NL   G+ Y      
Sbjct: 108 IAFDTPAELEEKRKEIANF--QYD--ASTRSLMRNSLTLSPEEVQNLIESGHQYVVRAKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
             ++     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPNEDIHVNDLIRGEVVINSSILD---DKVLYKSADQLPTYH---LANIVDDHLMEVTHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +      +    +     L+         K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRFFGWEDTMPSFAHLSLLLKPEG--NGKLSKRDGD 267


>gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
 gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
          Length = 650

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 104/349 (29%), Gaps = 86/349 (24%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+GH  C V  D +A      GY+V      ++ G +I   A             
Sbjct: 15  PSGKAHIGHSYCTVATDAIARYKRMQGYDVMFLTGTDEHGQKIELNAA------------ 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +     + +  +LLN   ++++    DY V+A+ KI ++    
Sbjct: 63  -----KAGVTPKEYVDEIVAGFQELW--KLLNISNDRFIRTTDDYHVKAVQKIFKELYDR 115

Query: 252 LNIQHDIFIS------------------------------EDDFHRGDPSPIRDIIDNLA 281
             I    +                                E++ +        D +  L 
Sbjct: 116 GEIYKGKYEGWYCTPCESFWTETQLKDGKCPDCGREVKWAEEEAYFFKLGNYADRLLKLY 175

Query: 282 R------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
                  Q    +  +            + R    +   +  D      +  D    Y  
Sbjct: 176 EDQPDFIQPESRKNEMIQFIKNGLDDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYIT 235

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD- 394
           A               M Y  G D S Y K   A    + ++  + + ++   + +  D 
Sbjct: 236 A---------------MGYGSGDD-SDYRKYWPADVHFIGKEIVRFHTIIWPAILMALDL 279

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                         G   KMSK  G+ +    + D  G D++R+ +L  
Sbjct: 280 PLPKQVYGHGWLLFGDGSKMSKSKGNVVDPVILCDRYGVDAIRYFLLRE 328


>gi|154149034|ref|YP_001406307.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153805043|gb|ABS52050.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 638

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 80/469 (17%), Positives = 152/469 (32%), Gaps = 67/469 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------LSVFW 183
           H+GH    ++ DTLA      GYE       ++ G +I   A             +S  +
Sbjct: 17  HIGHAYTTIICDTLARFYRLQGYETFFLTGTDEHGQKIEEAAKKHGTSPKIYADAVSAKF 76

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
           R     ++   D         ++K         +++  +   E +    V   S     +
Sbjct: 77  RSLWDYFDISYDHFIRTTDEYHIKTAQNAFEIMFANGDIYKGEYEGYYCVSCESFFPETQ 136

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA----------RQGYVYEGILPP 293
           +I  +      +    I E+ +          ++              ++  V   +   
Sbjct: 137 LIDGEYCPDCGKKTQIIKEESYFFRLSKYTDRLLKWYEDEENCILPRGKKNEVISFVKSG 196

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNM 352
            K  +  +   D    +     + D      +  D    Y +A L Y +   +  F ++ 
Sbjct: 197 LKDLSITRTSFDWG--IKLPEKLNDPKHVMYVWLDALINYLSA-LGYTQNGEKMDFWNDT 253

Query: 353 IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           I+++G D    H+ Y     A   ++     +    +       RDG   KMSK  G+ +
Sbjct: 254 IHIVGKDILRFHAVY---WPAFLMSLGLPLPK---HIAAHGWWTRDGK--KMSKSIGNVV 305

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
             + V D  G +  R+ +L R+     D DF +    S+ N            R I    
Sbjct: 306 NPKEVADAYGLEQFRYFLL-REVPFGQDGDFSQKAIISRINSELANDLGNLLNRII---- 360

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA--FYLY 526
                  +F +  ++V+   ++           + E    ++NA    E  ++A   YL 
Sbjct: 361 GMSEKYSNFKINSKDVLKFYAD----------EMNETKNYLKNAVENLE--EVATSRYLE 408

Query: 527 DLASVF---HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +L       +   S  +  P        N K     L LV  VA+I+  
Sbjct: 409 ELFKALNLANS--SITKYEPWKMIKNGENEKA----LALVALVANILAK 451


>gi|90101539|sp|Q3A253|SYV_PELCD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 899

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 74/264 (28%), Gaps = 44/264 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +        +I     N TG +H+GH     + D LA      G
Sbjct: 29  EAKWYEFWTENGLFHADENSPKNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDG 88

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +EV                           L+   +D        V  K +  E      
Sbjct: 89  HEV---------------------------LWQPGTDHAGIATQNVVEKQLAAE-----G 116

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S   +   E ++  V  +  ++  +II   LK L    D          G    +R++  
Sbjct: 117 SSRHDLGREGFVDRVWQWRTESGGQIINQ-LKRLGASCDWERERFTMDEGLSRAVREVFV 175

Query: 279 NLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPLLKSDG 329
            L  +G +Y                S    +    +  L   R  +VG   DR L+ +  
Sbjct: 176 TLYEEGLIYRDNRLINWCPRCHTALSDLEVEHQDQKGNLWHLRYPVVG--TDRHLVVATT 233

Query: 330 SYTYFAADLAYFKCKYERGFDNMI 353
                  D A      +  + ++I
Sbjct: 234 RPETMLGDTAVAVHPEDERYADLI 257



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 22/224 (9%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     Q+      +  L RD    KMSK  G+ I    V+
Sbjct: 497 VTGFD-ILFFWVARMMMMGLKF-MGQVPFKDVYIHALVRDAQGQKMSKSKGNVIDPLTVI 554

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DE G+D+ RF  L    ++  D      +     N V        +  +  R A     D
Sbjct: 555 DEYGTDAFRFT-LAAFAAQGRDVKLSVDRIAGYRNFV-------NKLWNASRFALMNLED 606

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D    P  +   + +   +E  ++  L +       A    +  + A  LY  A  +H 
Sbjct: 607 FD----PSGIDLDDCQLTLAERWILTRLIDVAAETGKALEEYKFNEAASVLY--AFTWHE 660

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA-SIINSGLNII 577
                 E  +      +       R     AV  +++   L ++
Sbjct: 661 FCDWYIELSKDDLYGED-----AARKATSQAVLYTVLEQLLRLL 699


>gi|147669052|ref|YP_001213870.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270000|gb|ABQ16992.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 880

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 56/191 (29%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K      +    +  N         I     N TG +H+GH   A + D +       G
Sbjct: 20  EKKWYQYWMEKGYFKPNPNSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQG 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                   ++ AG      A  V  R             E    G   + +G+EL  +  
Sbjct: 80  EPTLWLPGVDHAG----IAAQVVVER-------------ELAKQGKTRQQLGRELFLEKM 122

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E +N   EK                IR     L    D          G    +R+I  
Sbjct: 123 WEWVNPCREK----------------IRHQHMRLGASCDWDRETFTLDAGPVKAVREIFT 166

Query: 279 NLARQGYVYEG 289
           NL  +G +Y+G
Sbjct: 167 NLYEKGLIYKG 177


>gi|302380917|ref|ZP_07269379.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311295|gb|EFK93314.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 666

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 111/336 (33%), Gaps = 61/336 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    ++ DTL       GY+V      ++ G ++          Y++A   
Sbjct: 17  PSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKL----------YEKAKEK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---- 247
           N  D P  Y     +    K+L  K   ++ +F        V + +VQ + + + D    
Sbjct: 67  NMGDNPLNYI--DPIVQSAKDLWKKLDIDIDSFVRS--TDKVHEKNVQEIFQKLYDKGDI 122

Query: 248 -----------DLKALNIQ------------HDIFISEDDFHRGDPSPIRDIIDNLARQG 284
                      D +A   +             D+   E++ +    S  +D I  L +  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQLKDGKCPDCGRDVHYHEEESYFFRLSKYKDRILQLYKDN 182

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAAD 337
             +                 + + L    T          DD     +  D    Y    
Sbjct: 183 PDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCYLTG- 241

Query: 338 LAYFKCKYERGFDNM----IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           + Y +   E  F+      I+++G +    +     A+  A+     +  V     +   
Sbjct: 242 IGYGQD--EELFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPK-RVFAHGWILFN 298

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            D    KMSK  G+      ++D  G D++++ +L 
Sbjct: 299 ED----KMSKSKGNVYYPEPIIDLYGVDALKYYILR 330


>gi|300088135|ref|YP_003758657.1| valyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527868|gb|ADJ26336.1| valyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 880

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 50/196 (25%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +        +    +  +         +     N TG +H+GH   A + D +   
Sbjct: 15  DPASVEDKWYRFWMERGYFKPDTRSDKPPFTVIMPPPNVTGELHLGHALTAALEDIMTRW 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                           + AL+    D        V  + + KE 
Sbjct: 75  HRMKG---------------------------EPALWLPGVDHAGIAAQVVVERMLAKEN 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             KY      F E  W          +    IR     L    D          G    +
Sbjct: 108 KTKYDLGREAFTERMWQ------WANSCRDTIRRQHMKLGASCDWDREVFTLDDGPSLAV 161

Query: 274 RDIIDNLARQGYVYEG 289
           R    NL  QG +Y G
Sbjct: 162 RTTFKNLYDQGLIYRG 177


>gi|294011648|ref|YP_003545108.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674978|dbj|BAI96496.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 520

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 67/427 (15%), Positives = 123/427 (28%), Gaps = 67/427 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V  +   ++ G ++   A S      +AL +
Sbjct: 14  PNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARS-RDMEPRALAD 72

Query: 192 NDSDLPE---GYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKII 245
             S             Y + +     D + +             L + +     ++    
Sbjct: 73  EMSGYFRAMNDGLNISYDRFIRTSEPDHHRASQAIWQAMEANGDLYLGRYEGWYSVRDEA 132

Query: 246 RDDLKAL-----------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             D K L                 +  E+ +     +  + ++D  A Q       + P 
Sbjct: 133 FYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYANQ----PDFIQPD 188

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-------------- 340
             +      ++        +    D    +  SDG   Y   D                 
Sbjct: 189 SRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYITGCGYPDDTER 248

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMP 397
               +  G D + +++G D    + R   V   A  +S K      +      L R    
Sbjct: 249 MARYWSEGGD-ITHIIGKD----IVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRG--- 300

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+      + +  G D +R+ +L                E +  N   Y   A
Sbjct: 301 EKMSKSLGNVADPMELAERFGVDQLRYFLLS---------------EVTFGNDGSYSAEA 345

Query: 458 -YARCRSIFRQAKDIFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENAT 513
             AR  S    +             +N+   +P+ +  D     L+  + E  R  + A 
Sbjct: 346 IVARSNSDLANSFGNLAQRTLSFIAKNLEGRLPETAAQDVD-RDLLATVGEAARTFQAAM 404

Query: 514 IAQEPYK 520
               P  
Sbjct: 405 ADLAPST 411


>gi|87301458|ref|ZP_01084298.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp.
           WH 5701]
 gi|87283675|gb|EAQ75629.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp.
           WH 5701]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 44/260 (16%)

Query: 335 AADLAYFKCK--YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           AADLA +        GFD +I+         V R+  +A A + +    +V++  LV   
Sbjct: 505 AADLATWYPTSVLVTGFD-IIFFW-------VARMTMLAGAFTGRMPFADVMIHGLV--- 553

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK AG+ I    +++  G+D++RF ++        D      +       V 
Sbjct: 554 RDENNRKMSKSAGNGIDPLPLIERYGADALRFALVREVAGAGQDIRLDYDRASGSSATVE 613

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---- 508
             +    +  +  R A     +L  +       P  +    ++  ++  LA   R     
Sbjct: 614 AARNFANKLWNATRFA---LLNLGGETPASLGDPDPAALTLADRWILSRLARVNRETAER 670

Query: 509 -----IENATI---AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA--NNRKLTMM 558
                +  A          ++  +  +L           R NPR        +N  L   
Sbjct: 671 YGSYGLGEAAKGLYEFAWNEVCDWTIEL--------LKRRLNPRPAAEGEPLSNEALADQ 722

Query: 559 RLQLVHAVASIINSGLN-II 577
           R+        ++   L  ++
Sbjct: 723 RVA-----RQVLAKVLGELL 737


>gi|329121488|ref|ZP_08250112.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327469403|gb|EGF14873.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 937

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 85/248 (34%), Gaps = 33/248 (13%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D     + +  + EG   P   K+  + + D   + F S    + V +   +     ++ 
Sbjct: 511 DAWWTHSAKELLPEGFKSPYSGKSNFRKETDIMDVWFDSGSTWNGVVKQPREEWKGMSFP 570

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                             +Y+ GSD   G+ +     + AV+ K     +L         
Sbjct: 571 CD----------------LYLEGSDQHRGWFQSSLLTSVAVNGKAPYKALLTHGF---TV 611

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +  + +++  G+D +R  +        +      +K+ S       
Sbjct: 612 DGEGRKMSKSVGNVVAPQTIINRYGADVMRLWIASSDYQGDVRLSDKIIKQMSD------ 665

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
               Y + R+ +R       D D +   ++ IP     +  +  L+  L +    +  A 
Sbjct: 666 ---VYRKIRNTYRYLLSNLYDFDVE---KDAIPYNEMEEIDKWALLR-LEQVRDQVTKAY 718

Query: 514 IAQEPYKL 521
              E + +
Sbjct: 719 KNYEFHVM 726


>gi|258516479|ref|YP_003192701.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780184|gb|ACV64078.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 881

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 71/267 (26%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +           +   +        I     N TG +H GH     + D L   
Sbjct: 11  NPKEVEEKWYQHWEENHFFHTEVDLSAKPFCIVMPPPNVTGQLHGGHALDNTLQDILTRF 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                                     LP   + G+  +   +E 
Sbjct: 71  RRMQGCNTL--------------------------------WLPGTDHAGIATQAKVEEQ 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +  +       EK+L  V  +  +   +I    L+ L    D          G  S +
Sbjct: 99  LAQEGTTKHELGREKFLERVWAWKERYGGRITHQ-LRRLGASCDWERERFTMDEGCSSAV 157

Query: 274 RDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R++   L  +G +Y G                 +   +D+   L+       D    L+ 
Sbjct: 158 REVFIRLYEKGLIYRGNYITNWCPKCHTTISDIEVEHLDKPGHLYHLKYPAKDSADYLVV 217

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + +++
Sbjct: 218 ATTRPETMLGDVAVAVHPEDARYKHLV 244



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 44/200 (22%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L  D +  KMSK  G+ I    +++  G+DS+RFM++        L F F ++       
Sbjct: 518 LVLDALGRKMSKSLGNGIDPIDLIESHGADSLRFMLVTGNTPGNDLRFHFERLDGARNF- 576

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
                             A  ++    F L   +    E   D+ +  L     ++ Y  
Sbjct: 577 ------------------ANKLWNASRFSLMNLSDYDPEKPVDSQDYSLADRWMISRYQA 618

Query: 508 VIENATIAQEPYKLAFYLYDL---ASVFHGH-------WSHGRENPRLRFVQANNRKLTM 557
            +++ T   E        Y+L   A   +         W      PR+   +    + T 
Sbjct: 619 TVKSVTKNLE-------AYELGEAARSLYEFIWGEFCDWYLELIKPRVYGKEGEKARHTA 671

Query: 558 MRLQLVHAVASIINSGLNII 577
            R+      AS++   L ++
Sbjct: 672 QRVL-----ASVLKGTLELL 686


>gi|163848199|ref|YP_001636243.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526104|ref|YP_002570575.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669488|gb|ABY35854.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449983|gb|ACM54249.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 923

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 52/213 (24%), Gaps = 41/213 (19%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L         +            I     N TG +H+GH     + D L       G
Sbjct: 22  EQRLYEWWERNGLFAPRDDAPRPPFVISIPPPNVTGELHLGHAMFVAIEDLLIRWRRMQG 81

Query: 159 YEVTREYYINDAG----AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           Y+       + AG     Q+  L                                     
Sbjct: 82  YQTLWVPGTDHAGIATQTQVEKL------------------------------------L 105

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++  +       E++L    ++  +   +I R  L+ L    D          G    + 
Sbjct: 106 EREGTSRQAVGREEFLRRTWEWKEKYGGEITRQ-LRRLGASCDWSRERFTLDPGLSRAVH 164

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                L   G +Y G      S   Q    D +
Sbjct: 165 TAFKRLYDDGLIYRGTYLVNWSPKLQTAVSDLE 197


>gi|237751536|ref|ZP_04582016.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372902|gb|EEO23293.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 827

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 94  SPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +P+ +          SG+    N   K  K  +      P+G +H+GH R   +GD +A 
Sbjct: 16  NPAAIESKWQKIWQESGVFEPSNDFSKPKKYILSMF-PYPSGAIHMGHVRNYCIGDAMAR 74

Query: 153 LMAFSGYEV 161
                GY V
Sbjct: 75  YYRIYGYNV 83


>gi|134097970|ref|YP_001103631.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008560|ref|ZP_06566533.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910593|emb|CAM00706.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 877

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    V+   +  +  G     +I     N TG +H+GH     + D L 
Sbjct: 15  TWNPADVEAELYQRWVAAGYFTADPAGDKPPFSIVIPPPNVTGSLHIGHAFEHTLMDVLT 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+             ++  +++V    ++ L +   D  E    G   +    
Sbjct: 75  RRRRMQGYDAL-------WLPGMDHASIAVQAMVEKQLRDEGIDHRELGREGFLAR--VW 125

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  +K+   +L+                         ++ L    D          G   
Sbjct: 126 EWKEKHGGAILSQ------------------------MRRLGDSVDWTRERFTMDDGLSR 161

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++ I   L   G +Y  
Sbjct: 162 AVQTIFKKLYDDGLIYRA 179


>gi|302381076|ref|ZP_07269536.1| glutamate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303235269|ref|ZP_07321887.1| glutamate--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311123|gb|EFK93144.1| glutamate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302493583|gb|EFL53371.1| glutamate--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 489

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 105/298 (35%), Gaps = 48/298 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  L  +      +  R  Y+  A   I  L  
Sbjct: 9   APSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRI-----EDTDRTRYVEGA---IENLLE 60

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIV 233
            + W      +  + +++ ++ E    G Y++   V + L  KY  EL+      +    
Sbjct: 61  QLKWAGLDPDEGVVLDDEGNVTEVGECGPYIQSDRVKQGLYQKYIDELIEKGY-AYYCFC 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  +    + D   L  ++D         RG    I D    +A  G  Y   L  
Sbjct: 120 SKERLDQVKAQQKAD--GLMPKYDGLC------RGIS--IEDAKKRIA-NGEEYVIRLKL 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P++K     D  + ++ F +    D  D+ L+KSDG  TY     A     +  G  ++ 
Sbjct: 169 PENKEITFNDAIKGKITFNTN---DMDDQVLIKSDGFPTYHF---AVVVDDHLMGITHI- 221

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            V G +      +   +         +   L    V L + G   K+SKR  D     
Sbjct: 222 -VRGDEWISSTAKHVYLYQCFGWDVPEFVHL---PVVLNKSGK--KLSKRNDDVAVKD 273


>gi|270290996|ref|ZP_06197219.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280392|gb|EFA26227.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 887

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 59/211 (27%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +      V    +  N   K    +I     N TG +H+GH     + D L    
Sbjct: 13  PQKVEQGRYQEWVEKGLFKPNGDKKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY+             ++   ++   + +  L             GV    +G+   
Sbjct: 73  RMQGYDTV-------WVPGMDHAGIATQAKVEAKLRE----------QGVSRYDLGR--- 112

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK+  ++  + +E                 I      + +  D          G    +R
Sbjct: 113 DKFIDKVWEWKDE-------------YADTIHQQWAKMGLSLDYGRERFTLDEGLSKAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   L  +G +Y G          +    D
Sbjct: 160 KVFVTLYNEGLIYRGEYIINWDPQARTALSD 190



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 103/309 (33%), Gaps = 59/309 (19%)

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           K     L ++ + + +NF  E++    K +   A   +I   L     Q   +       
Sbjct: 375 KLAKMALVNQDTDDKVNFIPERFEHTFKQWMENAHDWVISRQLW-WGHQIPAWYH----- 428

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                            G VY G    PK     + D D     F S +           
Sbjct: 429 --------------KETGEVYVGE-EAPKDVENWEQDPDVLDTWFSSALWPFTTM----- 468

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVL 384
             G     AAD       ++R F     V G D   +      +  ++    K+   +VL
Sbjct: 469 --GWPDENAAD-------FKRYFPTSTLVTGYD-IIFFWVARMIFQSLKFTGKRPFKDVL 518

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
           L  L+   RD    KMSK  G+ I    V+D+ G+D++R+ +     + + L F + K+ 
Sbjct: 519 LHGLI---RDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAGQDLRFSYTKMD 575

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                        A+     I       +  ++ D   +  +P  +E + ++  +   L+
Sbjct: 576 A------------AWNFINKI--WNASRYVIMNLDQVDKPQLPALNELNLADRWI---LS 618

Query: 504 EYPRVIENA 512
                +E  
Sbjct: 619 RLNHTVEQV 627


>gi|256824764|ref|YP_003148724.1| valyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688157|gb|ACV05959.1| valyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 885

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 54/155 (34%), Gaps = 24/155 (15%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   +++E GSD+VR+     +      FD  ++K   +      
Sbjct: 592 DPDRKKMSKSKGNVVTPVDLLEEHGSDAVRYWAASARQGVDTAFDAQQMKVGRR------ 645

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                     +   +K      + D             +  +  L++ LA    V+E AT
Sbjct: 646 ------LAIKLLNASKFALGFGEVDGAEHPEQLLAQVTEPVDQSLLLELAR---VVEQAT 696

Query: 514 IAQEPYKLA-FY--LYDLASVFHGHWSHGRENPRL 545
              E    A  Y    ++   F   WS   +   L
Sbjct: 697 AGFE----AWDYTKALEVTEAF--FWSFCDDYLEL 725


>gi|184200670|ref|YP_001854877.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580900|dbj|BAG29371.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 517

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 72/416 (17%), Positives = 136/416 (32%), Gaps = 47/416 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  DTL       G     +   ++ G ++   A  +    ++    
Sbjct: 16  PNGAPHIGHAYEAIAADTLVRFQRLDGVATRFQTGTDEHGQKMQQTAEKLGTTPRELADA 75

Query: 192 NDSDLPE--GYYPGVYLKHVGKELADKYSS--ELLNFPEE---------KWLPIVKDYSV 238
           N +   E        Y + +     D  ++  EL    E               V+D + 
Sbjct: 76  NSARFREMDDELGISYDRFIRTTDEDHAAASQELWKRMEANGDIYLDTYAGWYSVRDEAY 135

Query: 239 QAMMK-IIRDDLKA--LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI----L 291
            A  +  +R D +   +    ++  +E++ +    S  +D +  L R  +V        +
Sbjct: 136 YAEDETEVRADGQRYSIGTGTELTWTEEESYFFRLSRYQDRLLELYRTDFVQPETRSHEI 195

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYER 347
                   Q   + R    +   + G+      +  D    Y       D      +   
Sbjct: 196 ASFVGGGLQDLSISRTTFDWGVPVPGNPDHVMYVWVDALTNYLTGLGFPDTDAPLFREFW 255

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                ++++G D    + R  AV        A I +        +      KMSK  G+ 
Sbjct: 256 PA--SVHLIGKD----IARFHAVYWPAFLMSAGIELPRKVFAHGFLFNQGEKMSKSVGNV 309

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           I    +V+E G D +RF +L R+     D ++       + N            RS+   
Sbjct: 310 IDPHAMVEEYGLDQLRFFLL-REVPFGQDGNYSHDAIAGRINSDLANDLGNLAQRSLSMV 368

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN---ATIAQEPYK 520
           AK++  ++          P+  EF   +L     LA+   V+     A  A   ++
Sbjct: 369 AKNLGGEV----------PEPGEFTAEDLA---MLAQAEDVVAEYRSAFEALAFHR 411


>gi|169824111|ref|YP_001691722.1| glutamyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|238687732|sp|B0S0W2|SYE_FINM2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|167830916|dbj|BAG07832.1| glutamyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 489

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 105/298 (35%), Gaps = 48/298 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  L  +      +  R  Y+  A   I  L  
Sbjct: 9   APSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRI-----EDTDRTRYVEGA---IENLLE 60

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIV 233
            + W      +  + +++ ++ E    G Y++   V + L  KY  EL+      +    
Sbjct: 61  QLKWAGLDPDEGVVLDDEGNVTEVGECGPYIQSDRVKQGLYQKYIDELIEKGY-AYYCFC 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  +    + D   L  ++D         RG    I D    +A  G  Y   L  
Sbjct: 120 SKERLDQVKAQQKAD--GLMPKYDGLC------RGIS--IEDAKKRIA-NGEEYVIRLKL 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P++K     D  + ++ F +    D  D+ L+KSDG  TY     A     +  G  ++ 
Sbjct: 169 PENKEITFNDAIKGKITFNTN---DMDDQVLIKSDGFPTYHF---AVVVDDHLMGITHI- 221

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            V G +      +   +         +   L    V L + G   K+SKR  D     
Sbjct: 222 -VRGDEWISSTAKHVYLYQCFGWDVPEFVHL---PVVLNKSGK--KLSKRNDDVAVKD 273


>gi|260061487|ref|YP_003194567.1| isoleucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785619|gb|EAR16788.1| isoleucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 1134

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   V +  A  NVL   LV    D    KMSKR G+ +     +D
Sbjct: 642 GVDQTRGWFYTLHAIGTLVFDSIAYRNVLSNGLV---LDKEGKKMSKRLGNAVDPFQTMD 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + G D+ R+ M+   N  + L FD   + E + K     Y  Y++    +   +     P
Sbjct: 699 DHGPDATRWYMIANANPWDNLKFDMDGILEVKRKFFGTLYNTYSFFALYANIDRFTYGEP 758

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           ++ +   P       SE +T    LI+        ++ A    EP + A 
Sbjct: 759 EVPYVERPEIDRWILSELNT----LILK-------VDEAYAQYEPTRAAR 797


>gi|310816641|ref|YP_003964605.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755376|gb|ADO43305.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 1028

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 59/217 (27%), Gaps = 33/217 (15%)

Query: 92  YLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
               +     L     S G         +    +I     N TG +H+GH     + D L
Sbjct: 6   TFDAASAEARLYQTWESAGAFRAGANASRPETFSIVIPPPNVTGSLHMGHAFNNTLQDIL 65

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G++   +   + AG     +               + +L +   PG       
Sbjct: 66  TRWHRMRGFDTLWQPGQDHAGIATQMVV--------------ERELAKAGLPG------- 104

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                           E +L  V ++  Q+   II+  LK L    D   +         
Sbjct: 105 ----------RREMGREAFLDKVWEWKEQSGGTIIQQ-LKRLGASCDWDRNAFTMDEHFQ 153

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +   +  +G +Y G          +    D +
Sbjct: 154 KAVIKVFVEMYAKGLIYRGKRLVNWDPHFETAISDLE 190



 Score = 38.4 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV +      V +  LV   RD    KMSK  G+
Sbjct: 630 TGFD-IIFFW-------VARMMMMQLAVVDDVPFKTVYVHALV---RDEKGKKMSKSLGN 678

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 679 VLDPLVLIDEYGADAVRFTL 698


>gi|169351609|ref|ZP_02868547.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552]
 gi|169291831|gb|EDS73964.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552]
          Length = 638

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 117/403 (29%), Gaps = 67/403 (16%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            +N         I + S  P    H+G+    ++ D +A      GY V  +   ++ G 
Sbjct: 1   MKNEKDYYLTTAITYTSGKP----HIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQ 56

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           +I   A       QQ +    +++         +  +     D++      + +++   I
Sbjct: 57  KIELKAKEAGIPPQQFVDEKAAEVK-------RIWDLMDTTYDRFMRTTDEYHKKQVQKI 109

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD----PSPIRDI------------ 276
            K    Q  + +   +        + F +E     G       P+ D             
Sbjct: 110 FKKLYDQGDIYLGHYE-GKYCTACESFFTESQLVDGKCPDCGGPVNDAKEEAYFFKLSKY 168

Query: 277 IDNLARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            D L      +   + P   K            Q   + R    +   +  D      + 
Sbjct: 169 ADRLIEHIEKHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVW 228

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D    Y              G+D    V G+    Y K   A    + +   + + +  
Sbjct: 229 IDALTNYITG----------LGYD----VDGNHGELYKKYWPADLHLIGKDIVRFHTIYW 274

Query: 387 ELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN- 431
            ++ +  D                  KMSK  G+ I    +VD  G D+VR+ +L     
Sbjct: 275 PIMLMALDIPLPKQVFGHPWLLQGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPY 334

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
                  +  + E+   +    +     R  S+  +  D   +
Sbjct: 335 DNDGSITWDLLVEKINSDLANVLGNLVNRTISMSNKYFDGIVN 377


>gi|89072554|ref|ZP_01159126.1| isoleucyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051658|gb|EAR57111.1| isoleucyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 946

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+ +K     VL    V    DG   KMSK  G+ +  +
Sbjct: 567 LYLEGSDQHRGWFQSSLISSVAMKDKAPYKQVLTHGFVV---DGQGRKMSKSIGNVVAPK 623

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 624 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTARFFLAN 674

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               + +    + +P E         +   +A    +I++       + +  
Sbjct: 675 LSGFNPE---TDCVPAEEMVALDRWAVGRAMAAQEEIIKD-YEDYNLHAVTQ 722


>gi|325281107|ref|YP_004253649.1| Isoleucyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312916|gb|ADY33469.1| Isoleucyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 1143

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/302 (20%), Positives = 103/302 (34%), Gaps = 59/302 (19%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMDRKQ 308
                 I+ISED   +     + ++++ + +    G++ E       +    K + D   
Sbjct: 527 WGTPLPIWISEDGTEKKCIGSVAELVEEIEKSIQAGFMQENPYQGFIAGDYSKENYD--- 583

Query: 309 LLFRSTMVGDDVDRPLLKSD-GSYTYFAADL--------AYFKCKYERGFDNMIYVM--- 356
              +  +    VD  +L SD G   Y   DL        A    +    F++   +    
Sbjct: 584 ---KIDLHRPYVDDIILVSDSGQKMYREKDLIDVWFDSGAMPYAQLHYPFEHREDIDQKL 640

Query: 357 ---------GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                    G D   G+   L A+A    +  A  N++   LV    D    KMSKR G+
Sbjct: 641 RFPADFIAEGVDQTRGWFFTLHAIATMAFDSVAFKNIISNGLV---LDAKGNKMSKRLGN 697

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAY 458
            +     +   GSD +R+ M+      + L FD   + E  ++          F+  YA 
Sbjct: 698 AVDPFSTIATYGSDPLRWYMITNSQPWDNLKFDMAGIDEVKRKFFGTLYNTYGFFALYAN 757

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                 FR A+               I +  E D   L L+  L +    +  A    EP
Sbjct: 758 VDH---FRYAEAEV-----------AIEERPEIDRWILSLLNSLIK---EVTEAYEKYEP 800

Query: 519 YK 520
            +
Sbjct: 801 TR 802


>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 920

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 125/389 (32%), Gaps = 75/389 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  +  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRTDLLDAIKETKWVPEWGEQRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                   +  + EG   P         + D   + F 
Sbjct: 470 GEPIITDETIEHVSALFREHGSNIWFEKEAKDLLPEGFTHPGSPNGKFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVA 371
           S   G      L + D        DL        R  D  +Y+ GSD   G+     + A
Sbjct: 530 S---GSSHQAVLEERD--------DLV-------RPAD--LYLEGSDQYRGWFNSSLSTA 569

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            AV+ +     VL         DG   KMSK  G+ +    V+ ++G+D +R  +     
Sbjct: 570 VAVTGQAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSVDY 626

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +      +K+ ++          Y + R+ FR       D D      N +  E   
Sbjct: 627 QADVRVSDAILKQVAE---------VYRKIRNTFRFLHGNLFDFD---PKANAVAVEDLR 674

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS-VFHGHWSHGRENPRLRFV 548
           +  +  L+  L +    ++ A    E   +  Y  +++  +      +        +   
Sbjct: 675 EVDQYILVK-LNKLIDKVKKAYDEYEFAVV--YHSIHNFCTVELSSFYLDF-AKDVVYIE 730

Query: 549 QANNRKLT-------MMRLQLVHAVASII 570
            A++              L L    A I+
Sbjct: 731 HADHPDRRSMQTVFYETLLALAKLTAPIL 759


>gi|257063698|ref|YP_003143370.1| glutamyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791351|gb|ACV22021.1| glutamyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 492

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 94/290 (32%), Gaps = 40/290 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R    N            V 
Sbjct: 10  APSPTGKLHIGGARTAIYNWAFARAMGGTFVLRIEDTDPERSTEEN----------TQVI 59

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R  + L  +  + PE G   G YL+    +  D Y++ L    +   +     +  +  
Sbjct: 60  LRAMRWLGLDWDEGPEVGGDFGPYLQ---TQRFDTYAAALETLKQRDAVYPC--FCTKEE 114

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +   R   ++    +  +  +          ++  +D   +       +  P      + 
Sbjct: 115 LDAKRQAAESAGQAYAGY--DRTCRNLSAEEVQARLDAGEK---CCWRLKVPEDHGPIEF 169

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D     + F + ++    D  ++++DG+ TY   + A        G  ++I   G DH 
Sbjct: 170 DDAVYGHMSFPADVMD---DMIVVRTDGTPTY---NFAVVCDDANMGITHVIR--GDDHL 221

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+              + +   G   K+SKR G      
Sbjct: 222 SNTPRQILIYEALGLTPPTFAH-----LSMILGGDGKKLSKRHGATSVEE 266


>gi|227522370|ref|ZP_03952419.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227090428|gb|EEI25740.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 675

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 106/343 (30%), Gaps = 66/343 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWRYQQ 187
           P+G +H+G+    +  D +A      GY+V      ++ G +I    + L ++      +
Sbjct: 17  PSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQKADKLGMAPQAYVDK 76

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     +             +  +K  +++    +++    + +Y+          
Sbjct: 77  MAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYLGEYTGWY------- 129

Query: 248 DLKALNIQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                ++  + + +E      +R D   +          G    G       + +    M
Sbjct: 130 -----SVSDEEYFTESQLAEVYRDDDGKVIG--------GKAPSGHEVQLVHEQSYFFKM 176

Query: 305 DRKQLLFRSTMVG-DDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMI 353
            +     R       D  +P  + +     F      DLA  +  +  G        +++
Sbjct: 177 SKYADWLRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVV 236

Query: 354 YVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV               G D S + K   A    V ++  + + +   ++          
Sbjct: 237 YVWIDALSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPK 296

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                        KMSK  G+ I    ++D  G D++R+ +L 
Sbjct: 297 TVYGHGWLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLR 339


>gi|149377782|ref|ZP_01895515.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357954|gb|EDM46443.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 939

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 104/317 (32%), Gaps = 47/317 (14%)

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNI 254
           Y       +  +        L      +W+P      ++AM K      I R     + I
Sbjct: 418 YRATPQWFISMDKESLRDDALEAIKGVRWVPAWGQNRIEAMFKQSPDWCISRQRTWGVPI 477

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCD--MDRKQLL 310
              I     + H    + I  +   + + G    Y+        +   + +  MD   + 
Sbjct: 478 TLFIHKETQELHPDTQNLIEAVAKEIEKGGIDAWYDIDTSELLGRDADQYEKVMDTLDVW 537

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHS-GYVKRLE 368
           F S +  + V RP                    + E G F   +Y+ GSD   G+ +   
Sbjct: 538 FDSGVTHESVLRP--------------------RTELGQFPADMYLEGSDQHRGWFQSSL 577

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             + A++       VL         DG   KMSK  G+ I  + V++E+G+D +R  +  
Sbjct: 578 KTSIAMNGVAPYKQVLTHGF---TVDGKGRKMSKSLGNVIAPQEVMNELGADILRLWVSA 634

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD---LFPRNVI 485
              S  +      +K+ +           Y R R+  R         D +   + P ++I
Sbjct: 635 TDYSGEMTVSKDILKQTADG---------YRRIRNTARFLLSNLTGFDPEQHAVAPEDMI 685

Query: 486 PQESEFDTSELQLIVHL 502
             +       LQL   L
Sbjct: 686 ALDRWMVDKALQLQKEL 702


>gi|240145522|ref|ZP_04744123.1| glutamate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202339|gb|EEV00624.1| glutamate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535990|emb|CBL09102.1| glutamyl-tRNA synthetase, bacterial family [Roseburia intestinalis
           M50/1]
          Length = 508

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/409 (16%), Positives = 146/409 (35%), Gaps = 76/409 (18%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E ++         + +
Sbjct: 34  APSPTGRMHVGNLRSALYEFLIAKHAGGDFMLRI-----EDTDQERFVE------GAVDI 82

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G Y G Y++    +  +  KY+ EL+   E  +        
Sbjct: 83  IYHTLEETGLVHDEGPDKDGGY-GPYVQSERMKTGIYMKYAKELVEKGE-AYYCFCDKER 140

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++++   +      +  +H + +S            ++ ++     G  +      P   
Sbjct: 141 LESLKTEVDGKEIMMYDKHCLHLS------------KEEVEANLAAGKPFVIRQNIPNEG 188

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT   D     +   +  +    D  L+KSDG  TY   + A     +     ++  V G
Sbjct: 189 TTTFHDELYGDITVDNAELD---DMILIKSDGYPTY---NFANVVDDHTMNITHV--VRG 240

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +++     + + +  A   +       +   + L  D    K+SKR+G   +   ++++ 
Sbjct: 241 NEYLSSSPKYQRLYDAFGWESP-----VYIHLPLITDENHKKLSKRSGHS-SFEDLLEQG 294

Query: 417 -VGSDSVRFMMLW----RKNSELLDFDFCKVKEQS----KENPVFYVQYAYARCRSIFRQ 467
            +    V ++ L       N E+   D   +KE       ++P  +  Y   +  +    
Sbjct: 295 FLSEAVVNYISLLGWSPEDNREIFTLD-ELIKEFDYHRISKSPAVF-DYTKLKWMN---- 348

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
             +    +DFD F     P   E  T +L L   +A         +P +
Sbjct: 349 -GEYIKAMDFDSFYEKAEPYIREVITKDLDL-KKIAAMVKTRIEVFPDI 395


>gi|302671511|ref|YP_003831471.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316]
 gi|302395984|gb|ADL34889.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316]
          Length = 890

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 61/239 (25%), Gaps = 33/239 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L S   +   +   +        I     N TG +H+GH     + D L 
Sbjct: 8   TYDPKNIESRLYSNWEAKKYFHAEVDETKKPFTIVIPPPNITGKLHMGHALDNTMQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +   AL     D  +             
Sbjct: 68  RFKRMQGYNAL-------WQPGTDHASIATEVKIIDALKAEGID--KRDLGREKFLERAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   +Y   ++                          LK +    D          G   
Sbjct: 119 EWKKEYGGTIIQQ------------------------LKKMGSSCDWDRERFTMDEGCNE 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            + ++   +  +GY+Y+G          +    D +            +  P++  DGS
Sbjct: 155 AVTEVFCKMHEKGYIYKGSRIVNWCPVCKTSISDAEVEYEEQAGHLWHIKYPVINEDGS 213


>gi|299820707|ref|ZP_07052596.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817728|gb|EFI84963.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 663

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 113/338 (33%), Gaps = 54/338 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------- 178
           P+G  H+GH    V GD +A      GY+V      ++ G +I   A             
Sbjct: 17  PSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAKAKEQGISEQQYVDE 76

Query: 179 -LSVFWRYQQALYNNDSDL----PEGYYPG-----VYLKHVGKELADKYSSELLNFPEEK 228
               F    + L  +++D      E +  G       L   G     +Y        EE 
Sbjct: 77  VAEGFQELWKKLEISNTDFIRTTQERHKTGVQAIFERLVEQGDIYLGEYEGWYSVSDEEY 136

Query: 229 WLPI-VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN-------- 279
           +    + +       K+I    KA +      + E+ +          +++         
Sbjct: 137 FTETQLAEVYRDEAGKVIGG--KAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFI 194

Query: 280 --LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
              +R+  +    + P      +   + R    +   + G+      +  D    Y  A 
Sbjct: 195 LPESRKNEMINNFIKP----GLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITA- 249

Query: 338 LAYFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRL 391
           L Y      K+++ +   ++++G +    + R   +      ++       ++      L
Sbjct: 250 LGYNTDNDTKFQKYWPADVHIVGKE----IIRFHTIYWPIILMALDLPLPKMIFGHGWIL 305

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            +DG   KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 306 MKDG---KMSKSKGNVVDPYMLIDRYGLDALRYYLLRE 340


>gi|45357889|ref|NP_987446.1| methionyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|68565983|sp|Q6M0E5|SYM_METMP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45047449|emb|CAF29882.1| Methionyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 663

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/424 (13%), Positives = 123/424 (29%), Gaps = 62/424 (14%)

Query: 133 TGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
            GP+H+GH R   +  D     +   G EV      ++ G  I   A       + +  R
Sbjct: 13  NGPLHLGHARSTYIPADIFTRYLKLKGEEVIHVGGTDNHGVPITLTAEKEGVKPIDIVDR 72

Query: 185 YQQALYNND--------------------------SDLPEGYYPGVYLKHVGKELADKYS 218
           Y  A+  +                           S L E  Y  +Y K + +   +K  
Sbjct: 73  YHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGY--IYEKEIEQFYCEKCD 130

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF--------ISEDDFHRGDP 270
             L +   E   P  +  +     ++    L+   + +           I     +    
Sbjct: 131 MYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKRTTHYFFKL 190

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQ---KCDMDRKQLLFRSTMVGDDVDR-PLLK 326
           S ++D +             +     +  +     D+ R           DD      ++
Sbjct: 191 SAMQDSLKEYIENSPEMPEHVKNMALRWIEELHDWDVSRNIKWGVPIPGCDDQVMYVWIE 250

Query: 327 SDGSYTYFAA---DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQIN 382
           +   Y  F     D+             + + +G D + +       +   +   K    
Sbjct: 251 APIGYVSFTKQLGDIWKSYWLENTDDSKISHFIGKDITVHHAVFWPGILKGIGGYKMPNA 310

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
           V+    + L       KMS      + ++  V+   SD +R+  +     +   DF +  
Sbjct: 311 VVSGGYLTL----ENKKMSTSKNWVVWVKDFVENFSSDYLRYFFMINAPLNRDTDFSWDD 366

Query: 442 VKEQSKENPVFYVQ-YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL---Q 497
            +++     +  +  + +       R+     P +D +          S+ D +E     
Sbjct: 367 FQKRINTELIDIIGNFTHRTLVFTERKFG-STPIVDLNQLKDEDKKLISKCDDTEKLVDS 425

Query: 498 LIVH 501
           LI  
Sbjct: 426 LIRE 429


>gi|323465337|gb|ADX77490.1| glutamyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 484

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVIRIED----TDSKRNLADGESSQFDKL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +GY  G Y +    E+      +LL   +  K     ++   
Sbjct: 64  ----KWLGLDWDESVDKDKGY--GPYRQSERGEIYQPLVEQLLAEDKAYKCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     +H     E+                   +G         P++KT
Sbjct: 118 ERQEQIARGEMPRYGGKHAHLTEEER-------------QQFEAEGRKPAIRFRVPQNKT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S   GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YTFDDMVKGPVTFESDNFGDW---VIVKKDGVPTYN------FAVAVDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +      +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQLMIYETFGWEPPRFAHM-----TLIVNEQRKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|229815165|ref|ZP_04445502.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
 gi|229809395|gb|EEP45160.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
          Length = 862

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K + S     +        K  K  +E     P+G +H+GH R   +GD +A      G
Sbjct: 27  EKWVKSWEEQNLFAVDTDSTKPKKYVLEMF-PYPSGDLHMGHARNYTIGDAMARQARMRG 85

Query: 159 YEV 161
           Y+V
Sbjct: 86  YDV 88



 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 16/160 (10%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDF 407
           Y+ G +H+     Y +        +           LLC+ +    +G    MSK  G+ 
Sbjct: 570 YIGGIEHAILHLLYSRFFTKALRDMGLLDVDEPFTNLLCQGMVKDENGDT--MSKSKGNV 627

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    V++  G+D++R  +L+    E  DFD+     ++ E    +++ A+     +   
Sbjct: 628 VPPSSVIEPFGADTMRLAILFIAPPEK-DFDWD---PKAVEGANRFIKRAWRIVWQLAET 683

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
           A D    LD     +  +    E       L     ++ R
Sbjct: 684 AGDA-ASLDKGALSKPALELYRERH---RTLAKCTEDFDR 719


>gi|90021016|ref|YP_526843.1| valyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89950616|gb|ABD80631.1| valyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 922

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 66/236 (27%), Gaps = 37/236 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +   L         +  +  GKG   +I     N TG +H+GH     + D L    
Sbjct: 7   PSAIETALYQNWEEKGYFAPS--GKGDPYSIMIPPPNVTGSLHMGHGFQESIMDALIRYH 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                                 + L 
Sbjct: 65  RMKGNNTLWQVGTDHAGIATQMVV--------------------------------ERLL 92

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D       +   EK++  V ++  ++   I R  L+ L    D          G  + ++
Sbjct: 93  DAEGKSRHDLGREKFIEKVWEWKEESGGNITRQ-LRRLGASPDWSRERFTMDDGFYNAVQ 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           ++   L     +Y G               D + +             PL  SDGS
Sbjct: 152 EVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVISEEEKGFMWHFRYPL--SDGS 205


>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 921

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 65/347 (18%), Positives = 117/347 (33%), Gaps = 73/347 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +A  +   +F +E     G
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYAE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           DP    + I+                   +  + EG           + + D   + F S
Sbjct: 470 DPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
                   + +L+               +   +R  D  +Y+ GSD   G+     + A 
Sbjct: 530 GS----SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTAV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           AV+ K     VL    V    DG   KMSK  G+ +  + ++D++G D +R  +      
Sbjct: 570 AVTGKAPYKGVLSHGFV---LDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWVSSVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      +K+ ++          Y + R+ FR       + +       V  +  E D
Sbjct: 627 SDVRISDDILKQVAE---------VYRKIRNTFRFLLGNLDNFNPSENTVAVA-ELREVD 676

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                    L +   +I     A E        YD A+V+H   +  
Sbjct: 677 RY------MLVKLNDLITKVKDAYE-------TYDFAAVYHAIHNFC 710


>gi|325475164|gb|EGC78349.1| glutamyl-tRNA synthetase [Treponema denticola F0402]
          Length = 506

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 111/346 (32%), Gaps = 67/346 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  H+G  R A+     A   +  G  V R   I D               Y+Q 
Sbjct: 8   APSPTGFQHIGGVRTALFNYLFAR--SKGGKFVLR---IEDTDR------TRYSEEYEQN 56

Query: 189 LYNNDSDL--------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           LY+    L        P+G     Y++    ++  KY+ EL++     +        +  
Sbjct: 57  LYDTLEWLGLEWDEGGPKGGPCAPYIQSQRFDIYRKYAQELVDKG-FAYYCFCDSERLDR 115

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + KI    +  +   +D         R   +   + I     +G  Y   L  P   +T+
Sbjct: 116 IRKIQ--TMNKMPPGYD---------RACRNLTDEEIKAKMDEGVPYVIRLKVPLEGSTK 164

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     + +++  +    D+ LLKSDG  TY    LA     +  G  ++  +   + 
Sbjct: 165 FTDALLGDIEWKNEDINP--DQILLKSDGFPTYH---LANIVDDHLMGITHV--MRAQEW 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------ITLR 411
                    +  A   +  Q   L   +          K+SKR G               
Sbjct: 218 LPSTPMHVIMYKAFGWEPPQFCHLPMVMGNDG-----QKLSKRHGATSCNEFRNKGYLKE 272

Query: 412 HVVDEV---------GSDSV------RFMMLWRKNSELLDFDFCKV 442
            +++ V         G D        +   +   N     FD+ K+
Sbjct: 273 AIINYVAMLGCSYEDGRDMYSLSDLEKLFDIKHLNKAPAVFDYKKL 318


>gi|315027115|gb|EFT39047.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 677

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 124/349 (35%), Gaps = 78/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 24  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 74  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDM-DRK 307
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++   +
Sbjct: 121 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 177

Query: 308 QLLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERGF---- 349
              FR +   D          +  +P  + +     F      DLA  +  +  G     
Sbjct: 178 SYFFRMSKYADRLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKN 237

Query: 350 --DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV              GS+     ++   A    V ++  + + +   ++ +  
Sbjct: 238 DPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMAL 297

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 298 DLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 346


>gi|313900429|ref|ZP_07833922.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954491|gb|EFR36166.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
          Length = 445

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 110/313 (35%), Gaps = 35/313 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL       GY V       D   +I  +A        +    +++++
Sbjct: 36  HIGNARPIVVFDTLKRTFQAIGYNVKMVSNYTDVDDKIIKVA--------KECGVSEAEI 87

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E +        +    A   ++  +    +         ++ A +K++ D   A  ++ 
Sbjct: 88  TEKFIDAYNHDRLSLHAAMPDAAPRVTETMD---------AIIAFIKLLVDKGHAYEMEG 138

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++   +          + I D L        G      SK     D      L++ T  
Sbjct: 139 DVYFRVNSVESYGKLSNQQIEDLLV-------GARIDENSKKENPLDF----TLWKKTEE 187

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVS 375
           G   D P   S G   +    +       E G ++ I + G          E  +A + +
Sbjct: 188 GIKWDSPW--SVGRPGWHTECVVMINQ--EFGGEHTIDIHGGGMDLKFPHHENEIAQSRA 243

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
              + I         +  DG   KMSK  G+ I  + ++ ++G + +R++ML       L
Sbjct: 244 AYDSPIANYWIHNGMVNIDGE--KMSKSLGNVIWAKDMIAKIGGNVLRWVMLSAHYRAPL 301

Query: 436 DFDFCKVKEQSKE 448
           + +   ++   KE
Sbjct: 302 NINEEAIETAKKE 314


>gi|163754377|ref|ZP_02161499.1| isoleucyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161325318|gb|EDP96645.1| isoleucyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 1134

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 31/177 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   V +  A  NV+   LV    D    KMSKR G+ +     +D
Sbjct: 642 GVDQTRGWFYTLHAIGTMVFDSVAYKNVVSNGLV---LDKHAQKMSKRLGNAVDPFTTLD 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G D+ R+ M+   N  + L FD   + E  ++          F+  YA     S    
Sbjct: 699 KYGPDATRWYMISNANPWDNLKFDLEGIAEVRRKFFGTLYNTYSFFCLYANIDNFS---- 754

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAF 523
                     D       P+   +  SEL  LI ++ ++           EP + A 
Sbjct: 755 -------YSEDEIVLAERPEIDRWILSELHTLIKNVDQF-------YAEYEPTRAAR 797


>gi|94986905|ref|YP_594838.1| glutamyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123385073|sp|Q1MR60|SYE_LAWIP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|94731154|emb|CAJ54516.1| Glutamyl-and glutaminyl-tRNA synthetases [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 465

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 93/286 (32%), Gaps = 45/286 (15%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +   + +PTG +H+G  R A+    LA             +++     +I    L 
Sbjct: 1   MKKVVTRFAPSPTGQLHIGGARTALFSWLLAR-------HFDGIFHL-----RIEDTDLE 48

Query: 181 -VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                Y   +  + S L   +   +  +    E   +    LL      +        ++
Sbjct: 49  RSKQEYTDTILESMSWLGLNWDGEIVYQSKRNERYHEVIDILLQTG-HAYWCHCSIEQIE 107

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            M +  R   K    +++    E          +R                L  P +   
Sbjct: 108 KMREEARQ--KGEKPRYNGCCREKKLSANPSGVVR----------------LKVPSAGQV 149

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ + Q+  ++T +    D  L +SDG+ TY    LA     ++    ++I   G D
Sbjct: 150 TFNDLVKGQVTVQNTELD---DMVLQRSDGTPTY---QLAVVVDDHDMQVTHIIR--GDD 201

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     +   +  A+  +     + +   + +       K+SKR G
Sbjct: 202 HVSNTPKQILIYNALGWE-----IPIFGHIPMILGSDRQKLSKRHG 242


>gi|258593868|emb|CBE70209.1| isoleucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 941

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       A     +     VL    V    DG   KMSK  G+ +  + 
Sbjct: 569 YLEGSDQHRGWFHSSLLTAVGTRGRAPYRAVLTHGFVV---DGEGKKMSKSLGNVVAPQE 625

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+D  G++ +R  +      + +      +K  ++          Y R R+  R      
Sbjct: 626 VIDRYGAEILRLWVAAEDYRDDIRISEEILKRLAEG---------YRRIRNTCRYLLGCL 676

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
                D  P       +E D  +  ++  L      +  A    E + L
Sbjct: 677 S----DFQPARDALPLNELDEIDRFILHRLGRLVERLRQAYETYEFHLL 721


>gi|288554702|ref|YP_003426637.1| glutamyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545862|gb|ADC49745.1| glutamyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 484

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 93/300 (31%), Gaps = 46/300 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R     +       L  S+ 
Sbjct: 10  APSPTGHLHIGGARSALFNYLFAKSQGGKFILRIEDTDQAR-----NVETATEKLMDSLK 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      +L  +Y  +L++  +  +  + +        
Sbjct: 65  WLGIEW----DESVDVGGEYGPYSCMERIDLYKEYIQKLIDEGKAYYCYMTESELEAERE 120

Query: 243 KIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +   +  K      ++  SE   +                +G         P+ +   
Sbjct: 121 EQLARGETPKYSGRDRNLTESERKAY--------------EEKGLKPVVRFRVPEGQDIV 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSD 359
             D  R ++ F S  +GD     + + DG   Y       F    +     + +V+ G +
Sbjct: 167 IDDAVRGKVTFESDGIGDF---VIARKDGVPMYN------FAVTVDDHLMKITHVIRGEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R   +  A   +  +          L  +    KMSKR    I       E+G 
Sbjct: 218 HLSNTPRQVMLYQAFGWETPRFAH-----ASLILNPNRQKMSKRDESIIQFVEQYKELGY 272


>gi|261250335|ref|ZP_05942911.1| isoleucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260939451|gb|EEX95437.1| isoleucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 945

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 38/303 (12%)

Query: 228 KWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M++      I R     + I   +     + H      +  +   + 
Sbjct: 450 EWMPEWGQSRIEGMVEGRPEWCISRQRTWGVPIALFVHKETAELHPNTIELVEKVAQLVE 509

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +G          +       + D+ + +  +  V  D         G   Y   D    
Sbjct: 510 EKGI---QAWWDVEIADLLGEEADKYEKVLDTLDVWFDS--------GVTHYSVVD---A 555

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           + +Y  G    +Y+ GSD   G+ +     + A+  +     VL    V    DG   KM
Sbjct: 556 REEYN-GASADLYLEGSDQHRGWFQSSLISSIAMKGEAPYKQVLTHGFVV---DGHGRKM 611

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 612 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 662

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L       +++P E         +   LA    ++  A      + 
Sbjct: 663 IRNTAR---FFLANLSGFNPATDIVPAEEMVALDRWAVGRALAAQEEIV-KAYGEYNTHA 718

Query: 521 LAF 523
           +  
Sbjct: 719 VTQ 721


>gi|257427267|ref|ZP_05603668.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275918|gb|EEV07386.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 657

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 109/349 (31%), Gaps = 76/349 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+         +    LK 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQ--------VFERLLKQ 115

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I    +                ++D     G +   I         +   +  +   F
Sbjct: 116 GDIYLGKYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEESYFF 172

Query: 312 RSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD---- 350
             +      DR L   D +  +                   ADLA  +  +  G      
Sbjct: 173 NISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSN 229

Query: 351 --NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             +++YV                 D S + K   A    ++++  + + ++  ++ +  D
Sbjct: 230 PKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALD 289

Query: 395 --------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                             KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 290 LPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|154248289|ref|YP_001419247.1| glutamyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|238686744|sp|A7INJ6|SYE1_XANP2 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|154162374|gb|ABS69590.1| glutamyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 471

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 94/306 (30%), Gaps = 56/306 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A              +          + L + 
Sbjct: 3   QIVTRFAPSPTGFLHIGGARTALFNWLYAR-------------HTG------GKMLLRIE 43

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA-- 240
              +Q                + +   G  +     +E      E+ L     Y   A  
Sbjct: 44  DTDRQRSTKEAIAAIIEGLEWLGITCDGDPIYQFARAERHRAAVEEMLAKGNAYRCYATP 103

Query: 241 -MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +  +R+  +             D    +    RD +  L             P+   T
Sbjct: 104 QELDEMRELARKEGRPPRYDGRWRDRDPSEAPKDRDPVIRLRA-----------PQEGET 152

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              DM +  + F +  +    D  LL+SDG+ TY    LA     ++ G  ++I   G D
Sbjct: 153 VIDDMVQGTVTFPNKDLD---DLVLLRSDGNPTYM---LAVVVDDHDMGVTHVIR--GDD 204

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R   +  A+  +  ++       + L       K+SKR G           +G 
Sbjct: 205 HLTNAARQTQIYRALGWEVPRMAH-----IPLIHGPDGAKLSKRHG----------ALGV 249

Query: 420 DSVRFM 425
           D+ R M
Sbjct: 250 DAYRDM 255


>gi|121716793|ref|XP_001275911.1| glutamyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119404068|gb|EAW14485.1| glutamyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 602

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 105/292 (35%), Gaps = 47/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+    LA      G  + R   I D   Q  T+  +    Y+  
Sbjct: 50  APSPTGYLHLGSLRTALFNYLLAK--RTGGQFLLR---IEDT-DQKRTIPGAEQRLYEDL 103

Query: 188 ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
               L  ++  +  G Y G Y +     +  K+++EL+N       F   + L  +  + 
Sbjct: 104 QWAGLQWDEGPIVGGPY-GPYRQSERTAIYRKHANELINNGHAYRCFCSAERLDSLARHR 162

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPKS 296
            QA +    D         D+   E +    +       +  L  +GY ++  ++     
Sbjct: 163 SQAGLAPGYD-----RKCADVSPEESEERAANG---EAHVVRLRMEGYPMFNDLVYGKTG 214

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +      +D    +F         D  ++KSDG  TY  A++       +     + +V+
Sbjct: 215 QNRPSSKLDLIDRVFD--------DPIMIKSDGHPTYHLANV------VDDHCMKITHVI 260

Query: 357 -GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            G++         A+  A +    +        V L  D    K+SKR  D 
Sbjct: 261 RGTEWMPSTPMHVALYKAFNWTPPRFGH-----VPLLVDKSGQKLSKRNADI 307


>gi|116878593|ref|YP_357724.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|114843229|gb|ABA89554.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 885

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 74/264 (28%), Gaps = 44/264 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +        +I     N TG +H+GH     + D LA      G
Sbjct: 15  EAKWYEFWTENGLFHADENSPKNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +EV                           L+   +D        V  K +  E      
Sbjct: 75  HEV---------------------------LWQPGTDHAGIATQNVVEKQLAAE-----G 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           S   +   E ++  V  +  ++  +II   LK L    D          G    +R++  
Sbjct: 103 SSRHDLGREGFVDRVWQWRTESGGQIINQ-LKRLGASCDWERERFTMDEGLSRAVREVFV 161

Query: 279 NLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPLLKSDG 329
            L  +G +Y                S    +    +  L   R  +VG   DR L+ +  
Sbjct: 162 TLYEEGLIYRDNRLINWCPRCHTALSDLEVEHQDQKGNLWHLRYPVVG--TDRHLVVATT 219

Query: 330 SYTYFAADLAYFKCKYERGFDNMI 353
                  D A      +  + ++I
Sbjct: 220 RPETMLGDTAVAVHPEDERYADLI 243



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 22/224 (9%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     Q+      +  L RD    KMSK  G+ I    V+
Sbjct: 483 VTGFD-ILFFWVARMMMMGLKF-MGQVPFKDVYIHALVRDAQGQKMSKSKGNVIDPLTVI 540

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           DE G+D+ RF  L    ++  D      +     N V        +  +  R A     D
Sbjct: 541 DEYGTDAFRFT-LAAFAAQGRDVKLSVDRIAGYRNFV-------NKLWNASRFALMNLED 592

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
            D    P  +   + +   +E  ++  L +       A    +  + A  LY  A  +H 
Sbjct: 593 FD----PSGIDLDDCQLTLAERWILTRLIDVAAETGKALEEYKFNEAASVLY--AFTWHE 646

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA-SIINSGLNII 577
                 E  +      +       R     AV  +++   L ++
Sbjct: 647 FCDWYIELSKDDLYGED-----AARKATSQAVLYTVLEQLLRLL 685


>gi|332878900|ref|ZP_08446615.1| isoleucine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683251|gb|EGJ56133.1| isoleucine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 1135

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 31/174 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A +V    A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 643 GVDQTRGWFYTLHAIATSVFNSVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFTTIA 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D+ R+ M+   N  + L FD   V E  ++          F+  YA          
Sbjct: 700 EYGADATRWYMISNANPWDNLKFDLEGVAEVRRKFFGTLYNTYSFFALYANT-------- 751

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYK 520
             D F   + D+ P    P+   +  SEL  LI         ++      EP +
Sbjct: 752 --DSFTYAEADI-PLAERPEIDRWILSELNTLIKE-------VDALYADYEPTR 795


>gi|301062444|ref|ZP_07203096.1| valine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443444|gb|EFK07557.1| valine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 884

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 34/195 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
               +K       +G+        +     +     N TG +H+GH     + D L    
Sbjct: 14  KEVEQKWYRYWEENGLFKPAAQSDRSPYCIV-IPPPNVTGTLHMGHALNNTLQDILCRYK 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +G  V                           L+   +D        V  + +  +  
Sbjct: 73  KMAGDNV---------------------------LWQPGTDHAGIATQNVVERDLAAQGT 105

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D+++        EK++ +V ++  +    II   L+ L    D          G    ++
Sbjct: 106 DRHA-----VGREKFIDLVWEWRKKYGGLIINQ-LRRLGCCCDWSRERFTMDEGLSRAVK 159

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +G +Y G
Sbjct: 160 EVFVRLHEEGLIYRG 174



 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 73/215 (33%), Gaps = 31/215 (14%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +           +V +  LV   RD    KMSK  G+ I    V+DE G+D+ 
Sbjct: 494 WVARMMMMGIHFMGDVPFRDVYIHALV---RDAEGKKMSKSKGNVIDPLVVMDEFGTDAF 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF  L    ++  D    + +          + Y +     I+  A+  F +LD +  P 
Sbjct: 551 RFT-LAALAAQGRDIKLSEER---------ILGYRHF-VNKIWNAARFAFMNLDDEELPG 599

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF--HGHWSHGR 540
           +     +  D     ++  + +   ++  A    +  + A     L   F  H       
Sbjct: 600 SETVSSTLAD---RWILTRIGQVSGIVAQALEDYQFNEAAG----LCYQFVWHEFCDWYL 652

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           E  + + +   ++           A    +   L 
Sbjct: 653 EMAK-QDLYGEDQARKH-------ATRRTMREALA 679


>gi|238928109|ref|ZP_04659869.1| glutamate--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884069|gb|EEQ47707.1| glutamate--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 508

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 93/297 (31%), Gaps = 46/297 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+     A       ++     +  R  Y+ DA   I     +  
Sbjct: 24  APSPTGYMHIGNLRTALYAYLFARANNGTFILRIE--DTDRNRYVADAVDFIRRTLDAA- 80

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++     G   G Y++     +  +Y+ +L+              S  A  
Sbjct: 81  -----GIIPDEGPDEIGGDYGPYVQSERMPIYKQYAEQLVA-------------SGHAYR 122

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              +   +A   +         + R       + +      G  Y      P    T   
Sbjct: 123 CFCQQTEEAEPAEDGKSYGG--YPRTCRDLTPEEVQAHLDHGDPYVIRQKMPLVGETTFY 180

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHS 361
           D+    +   +T +    D+ LLK DG  TY FA  +     +      ++I       +
Sbjct: 181 DVLHGSVTIPNTEL---EDQVLLKRDGMPTYNFANVIDDHLMRVS----HII-----RGT 228

Query: 362 GYVKRLEAVA---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            ++           A   +      L   + R    G   K+SKR G   +   +V 
Sbjct: 229 EFITSTPKHVLLYEAFGWEPPVFVHLAPVMGRDDATGKTSKLSKRHG-ATSFDDLVK 284


>gi|42525722|ref|NP_970820.1| glutamyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|67461820|sp|Q73R87|SYE_TREDE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|41815733|gb|AAS10701.1| glutamyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 506

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 111/346 (32%), Gaps = 67/346 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  H+G  R A+     A   +  G  V R   I D               Y+Q 
Sbjct: 8   APSPTGFQHIGGVRTALFNYLFAR--SKGGKFVLR---IEDTDR------TRYSEEYEQN 56

Query: 189 LYNNDSDL--------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           LY+    L        P+G     Y++    ++  KY+ EL++     +        +  
Sbjct: 57  LYDTLEWLGLEWDEGGPKGGPCAPYIQSQRFDIYRKYAQELVDKG-FAYYCFCDSERLDR 115

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + KI    +  +   +D         R   +   + I     +G  Y   L  P   +T+
Sbjct: 116 IRKIQ--TMNKMPPGYD---------RACRNLTDEEIKAKMDEGIPYVIRLKVPLEGSTK 164

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     + +++  +    D+ LLKSDG  TY    LA     +  G  ++  +   + 
Sbjct: 165 FTDALLGDIEWKNEDINP--DQILLKSDGFPTYH---LANIVDDHLMGITHV--MRAQEW 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------ITLR 411
                    +  A   +  Q   L   +          K+SKR G               
Sbjct: 218 LPSTPMHVIMYKAFGWEPPQFCHLPMVMGNDG-----QKLSKRHGATSCNEFRNKGYLKE 272

Query: 412 HVVDEV---------GSDSV------RFMMLWRKNSELLDFDFCKV 442
            +++ V         G D        +   +   N     FD+ K+
Sbjct: 273 AIINYVAMLGCSYEDGRDMYSLSDLEKLFDIKHLNKAPAVFDYKKL 318


>gi|150016655|ref|YP_001308909.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903120|gb|ABR33953.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 881

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 57/203 (28%), Gaps = 37/203 (18%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P      +         +   +        I     N TG +H+GH     + 
Sbjct: 7   NISTTYDPKEFEDRIYKNWEEKGYFTPVIDKNKKPYTIIMPPPNITGQLHLGHAFDDTLQ 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYL 206
           D L       GY                                    LP E +      
Sbjct: 67  DMLIRFKRMQGYCTL--------------------------------WLPGEDHASIATE 94

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             V  +LA++   +      E +L  V ++S       IR+ +K L +  D         
Sbjct: 95  VKVANQLAEQ-GYDKKEMGREAFLEKVWEWS-DKYRATIRNQVKKLGVSADFTREAFTMD 152

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
               + ++ +   L  +G +Y+G
Sbjct: 153 ENLSAAVKHVFVKLYNEGLIYQG 175


>gi|121601941|ref|YP_988908.1| glutamyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166200161|sp|A1USF5|SYE1_BARBK RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|120614118|gb|ABM44719.1| glutamyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 476

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 107/307 (34%), Gaps = 60/307 (19%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I   + +PTG +H+G  R A+                    ++  A      + L +  
Sbjct: 3   VITRFAPSPTGFLHIGGARTALF------------------NWLY-AKHHGGKMLLRIED 43

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--- 240
             ++   +            + L + G  ++    +E      E+ +   K Y   A   
Sbjct: 44  TDRERSTDAAVKAIINGLHWIGLSYDGDPISQFERTERHREVAEQLVKDGKAYYCYASPE 103

Query: 241 MMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +  +R+  +A      +D    + D     P  I+ +I             +  PK   
Sbjct: 104 ELAEMRESARAEGRPPHYDGHWRDRDISEA-PKGIKPVI------------RIKAPKEGA 150

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  +  +LF +  + D +   +L+SDG+ TY    LA     ++ G  ++I   G 
Sbjct: 151 TIVRDRVQGDVLFPNKDLDDFI---ILRSDGTPTYM---LAVVVDDHDMGITHIIR--GD 202

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     R   +  A+     +I V+    +    DG   K+SKR G           +G
Sbjct: 203 DHLTNAARQTIIFNAMGW---KIPVMAHIPLIHGEDGA--KLSKRHG----------ALG 247

Query: 419 SDSVRFM 425
            D+ R M
Sbjct: 248 VDAYRAM 254


>gi|315452888|ref|YP_004073158.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131940|emb|CBY82568.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 804

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  +    SG+        K  K  +      P+G +H+GH R   +GD LA      G
Sbjct: 11  AKWQNIWAQSGVFEPLKDFSKSKKYILSMF-PYPSGAIHMGHVRNYAIGDALARYYRQVG 69

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
           Y V      +  G      A+      +Q  Y N S + E +
Sbjct: 70  YNVLHPMGFDAFGMPAENAAIQYGIHPKQWTYENISKMREEF 111


>gi|197121883|ref|YP_002133834.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196171732|gb|ACG72705.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 1051

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 53/189 (28%), Gaps = 32/189 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +        G  +G          +I     N TG +H+GH   A + D L      SG
Sbjct: 26  ARWYPFWQERGYFHGDEHDRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSG 85

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +        + AG     +                               V KEL     
Sbjct: 86  FNTLWLPGTDHAGIATQMI-------------------------------VEKELKKTER 114

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L  V  +  Q   + I +  KAL    D          G    +R++  
Sbjct: 115 KSRHDLGREAFLERVWAWKEQYGSR-IGEQHKALGASLDWQRERFTMDEGLSRAVREVFV 173

Query: 279 NLARQGYVY 287
            L  +G +Y
Sbjct: 174 RLHEEGLIY 182


>gi|329770403|ref|ZP_08261785.1| glutamyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328836526|gb|EGF86186.1| glutamyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 487

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 107/302 (35%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +   + ++  +E               
Sbjct: 9   APSPTGNLHIGNARTALFNYLFAKHYGGDFVLRI-EDTDFKRNKE------------EGE 55

Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               +Y   L  + D  + +    G Y +    ++  KY+ +LL   +     +  +   
Sbjct: 56  RSQLKYMDWLGLDYDEGIEKEKEFGPYRQSERLDIYRKYAEQLLAEDKAYKCYMTAEELE 115

Query: 239 QAMMKIIRDDL-KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               + I + L    + +H     E+          ++  +   R+  +    +  P+ +
Sbjct: 116 AEREEQIANGLPPRYSGKHAHLTKEE----------QEAFEKEGRKPSIR---IRVPQDR 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    DM + +L F     GD     ++K+DG  TY   + A     +     +++   G
Sbjct: 163 TYSFDDMVKGELSFEGHDFGDF---VIVKNDGVATY---NFAVAIDDHLMEISHVLR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   V  A+  +  +   +      L  +    K+SKR    I      D++
Sbjct: 215 DDHVSNTPKQLVVYEALGFEPPRFGHM-----TLIVNENKKKLSKRDETIIQFIEQYDDL 269

Query: 418 GS 419
           G 
Sbjct: 270 GY 271


>gi|315125730|ref|YP_004067733.1| valine tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014244|gb|ADT67582.1| valine tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 950

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +     G+GT  +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQSLYQDWEQKGYF--KPSGQGTPYSIMIPPPNVTGSLHMGHAFQDTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 62  RFKRMQGNNTLWQVGTDHAGIATQML-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +      +   + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 91  KLAAEEGKTRHDLGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSE 149

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G               D +
Sbjct: 150 AVKEVFVRLHKENLIYRGKRLVNWDPKLHTAISDLE 185


>gi|270159965|ref|ZP_06188621.1| Isoleucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165291|ref|YP_003455429.1| Isoleucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988304|gb|EEZ94559.1| Isoleucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858464|emb|CBJ12342.1| Isoleucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 931

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 24/240 (10%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLAYFKC 343
            + +  L   KS      ++D K+LL       + ++  + +  D   T+F       + 
Sbjct: 491 LIEQVALLIEKSGIDVWFELDAKELLGNDAEFYEKINDTMDVWFDSGVTHFCV----LQQ 546

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +  F   IY  GSD   G+       + A+ +      VL         D    K+SK
Sbjct: 547 NKDLSFPADIYFEGSDQHRGWFNSSLTTSVAMYDVAPYKTVLTHGY---TVDAEGKKLSK 603

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+++ L  +V++ G+D +R  +        +      +K  +          AY R R
Sbjct: 604 SKGNYVALDQLVNQYGADILRLWVASTDYRHEVSISDEIIKRNAD---------AYRRIR 654

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPYKL 521
           +  R       D D     ++ +      +  +  L    L +    I  A    + + +
Sbjct: 655 NTARFLLANLFDFD---PTKDCVEANDLLELDKWALKRCQLLQ--EEIIEAYENYQFHII 709


>gi|228475261|ref|ZP_04059986.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270726|gb|EEK12135.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 466

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 103/334 (30%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V       D  +   
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYTV-------DYVSNFT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ + Y    Y       +    S+  +    ++ +  +K 
Sbjct: 69  DVDDKLINRSKE-LNESVPEIADRYIKAFYEDVGALNVKRATSNPRVMNHMDEIIEFIKQ 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                       D+     Q D +         D   +   I+   ++    +  L    
Sbjct: 128 LVDDGYAYESNGDVYFRTRQFDGYGKLSH-QSIDDLKVGARIEAGEQKEDALDFTLWKKA 186

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                  +    Q             RP       +    + +AY     E G    I+ 
Sbjct: 187 KPGEISWESPFGQ------------GRP------GWHIECSVMAYH----ELGKTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            E+  D +RF M+       ++++   V      
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNLELVNAAKSG 314


>gi|220921517|ref|YP_002496818.1| glutamyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219946123|gb|ACL56515.1| glutamyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 474

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 110/347 (31%), Gaps = 63/347 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A      G  + R   I D   + +T A     
Sbjct: 4   VVTRFAPSPTGFLHIGGGRTALFNWLYAR--KTGGRMLLR---IEDTDRERSTQAAI--- 55

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               A+ +  S L   +  G  +    +  A ++     +            Y+    + 
Sbjct: 56  ---DAILDGLSWLGLDW-DGEVVYQFAR--AARHWEVAESLLASGRAYRC--YATPEELA 107

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +R+  +             D    +  P    +  L            P + +T  + +
Sbjct: 108 EMREAARREGRPLRYDGRWRDRDPSEAPPGAKPVIRLRA----------PTEGETVVEDE 157

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           +  + +        D  D  LL+SDG+ TY    LA     ++ G  ++I   G DH   
Sbjct: 158 VQGRVVW----QNKDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDHLTN 208

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITLR 411
             R   +  A+      +       V L       K+SKR G                LR
Sbjct: 209 AARQTQIYEALGWAVPSMAH-----VPLIHGPDGAKLSKRHGALGVDAYRDLGYLPGALR 263

Query: 412 HVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           + +  +G            + +R   L +       FDF K++  + 
Sbjct: 264 NYLVRLGWSHGDQEIFSTEEMIRAFDLKQIGRSPARFDFAKLENLNG 310


>gi|195977374|ref|YP_002122618.1| glutamyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689790|sp|B4U0R8|SYE_STREM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|195974079|gb|ACG61605.1| glutamyl-tRNA synthetase; Glutamyl-tRNA(Gln) synthetase
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 481

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 101/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L      L  +Y  +LL           K Y  
Sbjct: 64  -----RWLGIDWDESPETHERYRQSERL-----ALYQQYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R+  +A   +   +++E  +           I      G V    L   ++  
Sbjct: 109 EEELAAERERQEAAG-ETPRYVNE--YLGMSADEKAAYIAEREAAGIVPTVRLAVNEAGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  ++F    VG   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWTDMVKGDIVFEGGNVG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +      +   +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAP----VFGHMTLIINSETGKKLSKRDTNTLQFIE 268


>gi|42522066|ref|NP_967446.1| hypothetical protein Bd0458 [Bdellovibrio bacteriovorus HD100]
 gi|81618454|sp|Q6MQK8|SYV_BDEBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39574597|emb|CAE78439.1| valS [Bdellovibrio bacteriovorus HD100]
          Length = 894

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 33/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +             +           +I     N TG +H+GH     + D + 
Sbjct: 10  RYNPADVESRTYEWWEKNGYFKAQDQSTKPPFSIILPPPNVTGFLHMGHALDHTIQDMMI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +GY                                    LP   + G+  + V +
Sbjct: 70  RWKRMNGYNTM--------------------------------WLPGTDHAGIATQSVVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   EK++  V D+  Q   + I   ++ L    D   +      G   
Sbjct: 98  RELKKDGVTRHDLGREKFVEKVWDWKHQYGNR-IYGQMRRLGDSCDWDRAVFTLDEGVSK 156

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +  +L ++G +Y G      S   +    D +
Sbjct: 157 AVRKVFVSLHKKGLIYRGQRLVNWSGPLETAISDLE 192



 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 22/191 (11%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ I    ++++ G+D++RF           DF F + + +   N 
Sbjct: 519 LVRDSQGRKMSKSLGNSIDPVEMIEKHGADALRFTFAAHL-YSGKDFKFSEQRLEGYRNF 577

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +        +  +  R A     D          +P +      +  +I  L E  + +E
Sbjct: 578 M-------NKVWNAARFALSNLSDFKAPTEGVKALPNKVHISVFDQWIITKLEEVTKTVE 630

Query: 511 NATIAQEPYKLAFYLYDLASVF--HGH--WSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            A   +     +  LY     F  +    W      P L    A  +  T     LV  +
Sbjct: 631 EAMEQERFSDASTALYQ----FIWNQFCDWYIEFTKPILNGNNAEEKAATQ----LV--I 680

Query: 567 ASIINSGLNII 577
           A ++N  + ++
Sbjct: 681 AQVLNRIMRLL 691


>gi|195953587|ref|YP_002121877.1| valyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933199|gb|ACG57899.1| valyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 990

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 80/269 (29%), Gaps = 43/269 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+     +++L + + S I   ++     + V       N TG +H+GH     + D +A
Sbjct: 4   YIPKDIEQEVLENWIKSNIYTVKSPKKAFSMVI---PPPNVTGSLHIGHALNITIQDIMA 60

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY+V                                  +P   + G+  + V +
Sbjct: 61  RFKRMQGYDVV--------------------------------WVPGFDHAGIATQFVVE 88

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K +   L    E++L  V  + V      I++ +K L    D          G   
Sbjct: 89  RELSKENKSRLEIGREEFLKRVWQW-VYKSRDNIKNQVKRLGASVDWSRERFTMDEGFSR 147

Query: 272 PIRDIIDNLARQGYVYEGIL-------PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
            +R     L  +G + +                  +    + K  L+       D    +
Sbjct: 148 AVRHAFKKLYEEGLIKKDTYIINWCPKDLTALSDLEVEHEEEKGKLYYIKYPVLDSTEYI 207

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +         D+A      +  + ++I
Sbjct: 208 IVATTRPETMLGDVAVAVNPNDERYKHLI 236



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  ++  +++K+   +V +  L+   RD    KMSK  G+ I    V+++ G+DS+
Sbjct: 585 WVARMIMMSKMLNDKEPFKDVYIHALI---RDEKGQKMSKTKGNVIDPIDVIEKYGADSL 641

Query: 423 RFMMLW 428
           RF +  
Sbjct: 642 RFTLAS 647


>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 929

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 25/174 (14%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G+D   G+ +     + A         VL    V    DG   KMSK  G+ I   
Sbjct: 557 LYLEGNDQHRGWFQSSLLTSVATKGTAPYRKVLTHGYVV---DGEGRKMSKSLGNGIDPA 613

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ E G+D +R  +     +  +      +K+ S+          Y + R+  R     
Sbjct: 614 DVIKEYGADILRLWVASSDYTTDIRISKDLLKQLSE---------VYRKIRNTARYILGN 664

Query: 472 FPDLDFDLFPRNVIPQESEFDTSEL----QLIVHLAEYPRVIENATIAQEPYKL 521
             D + D    +     +E D   L     LI         +  A    E + +
Sbjct: 665 INDFNPDTDSVD-YNDLNELDKWALGRMTNLIKK-------VNEAYDTYEFHLM 710


>gi|116074155|ref|ZP_01471417.1| valyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069460|gb|EAU75212.1| valyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 914

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 53/193 (27%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   ++     N TG +H+GH     + DT+      +G
Sbjct: 14  EARWQQAWEDQGAFHPDPKAPGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++   +  
Sbjct: 74  KNVLC--------------------------------LPGTDHASIAVQTILEKQLKEEG 101

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L     +  ++  + I   L+ L    D          G    +++   
Sbjct: 102 KTRHDLGREAFLERAWQWKAESGGR-IVGQLRRLGYSVDWKRQRFTLDEGLSEAVKEAFV 160

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 161 RLHEQGLIYRGEY 173



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 108/371 (29%), Gaps = 52/371 (14%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +    +   F  E+W  + +D+        I   L     +   +    +          
Sbjct: 373 EALEKQDPRFIPERWEKVYRDWLTDIRDWCISRQLW-WGHRIPAWFVISETGGKYTDTTP 431

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            ++     +    E       +    + D D     F S +             G     
Sbjct: 432 YVVARNEAEAL--EKAKAEYGAGAEIEQDEDVLDTWFSSGLWPFSTL-------GWPDAD 482

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           +ADL   Y       GFD +I+         V R+  +A A + +    +V +  LV   
Sbjct: 483 SADLQRWYPTSTLVTGFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV--- 531

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK AG+ I    ++D  G+D++RF ++        D      +++     V 
Sbjct: 532 RDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKKDTSATVE 591

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIE 510
             +    +  +  R A                  Q  + D + LQL     L+   RV  
Sbjct: 592 ASRNFANKLWNATRFALMN--------LGGETPAQLGDPDPAALQLADRWILSRLARVNR 643

Query: 511 NATIAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                        Y        LY+ A +     +    +         +   L   R+ 
Sbjct: 644 ETAERYS-----SYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVA 698

Query: 562 LVHAVASIINS 572
                  ++  
Sbjct: 699 -----KQVLAK 704


>gi|166031337|ref|ZP_02234166.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC
           27755]
 gi|166028742|gb|EDR47499.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC
           27755]
          Length = 648

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 116/389 (29%), Gaps = 53/389 (13%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
                  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I
Sbjct: 2   CEKCNKGKYYITTAIAYASGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKI 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
              A       +Q + N   ++         +  +     DK+        E +   I K
Sbjct: 62  ELKADEAGITPKQFVDNAAREIK-------KIWDLMNTSYDKFIRTTDEDHEAQVKKIFK 114

Query: 235 DYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDII 277
               Q    I +   + +     + F +E     G                    +    
Sbjct: 115 RLYDQG--DIYKSSYEGMYCTPCESFWTESQLVDGKCPDCGRECKPAKEEAYFFRMSKYA 172

Query: 278 DNLARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           D L      +   + P   K            Q   + R    +   +  D      +  
Sbjct: 173 DRLIDYINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWL 232

Query: 328 DGSYTYFAADLAY-----FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKA 379
           D    Y    + Y        ++++ +   ++++G D    + R   +      ++    
Sbjct: 233 DALTNYITG-IGYDCDGNSTEQFKKNWPADLHLIGKD----IIRFHTIYWPIFLMALDLP 287

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFD 438
               +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L            
Sbjct: 288 LPKQVFGHPWLLQGDG---KMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVIS 344

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +  + E+   +    +     R  S+  +
Sbjct: 345 WELMVERMNSDLANTLGNLVNRTISMTNK 373


>gi|289450868|ref|YP_003475083.1| glutamate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185415|gb|ADC91840.1| glutamate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 486

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 147/412 (35%), Gaps = 78/412 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG MH+G+ R A+    +A   + +G  V R     D G  +      ++    Q 
Sbjct: 9   APSPTGFMHIGNLRTALFEYLVAK--SNNGTFVFRLE-DTDRGRLVEGSVDVIYETMAQV 65

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +  ++    EG Y G Y++   +++    + +L+   +  +      +  +  +  ++D
Sbjct: 66  GISYDEGPGKEGPY-GPYIQSERRDIYRPEAEKLVKAGKAYYC-----FCSEERLAKLKD 119

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +  A +           + R      +  ++    +G  Y      P + TT   D    
Sbjct: 120 EHAANDH--------SGYDRHCRDLDQVTVEKYLAEGKPYVIRQKMPLTGTTTFIDEVYG 171

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKR 366
            +   +  +    D+ LLKSDG  TY  A++       +    ++ +V+ GS++     +
Sbjct: 172 AITVENKEL---EDQILLKSDGYPTYNFANV------VDDHAMHITHVVRGSEYLSSTPK 222

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------VGS 419
              +  A   K     +     + L      +K+SKR G   + + +V E       V  
Sbjct: 223 YNLLYEAFGYK-----IPTYIHLPLILGSDGLKLSKRHG-ATSFQDLVKEGYLPEAIVNY 276

Query: 420 DSV------------------RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
            ++                  +   +   +     FD+ K+   +      Y+Q      
Sbjct: 277 IALLGWAPGGTEEIFTLKELEKIFSVKGISKSPAVFDYDKLAWFNS----VYLQ------ 326

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL----IVHLAEYPRVI 509
               +++   F  L      R ++P +S  D     L    +  L++ P ++
Sbjct: 327 ----KKSLADFTALCCPYL-RQILPNDSSHDELLAGLLQPRLKKLSQIPEML 373


>gi|269962529|ref|ZP_06176877.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832724|gb|EEZ86835.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 942

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+ ++     VL    V    DG   KMSK  G+ +  +
Sbjct: 563 LYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGHGRKMSKSIGNVVAPK 619

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 620 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTARFFLAN 670

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               + +    +++P E         +   LA    ++  A      + +  
Sbjct: 671 LSGFNPE---TDIVPVEEMVALDRWAVGRALAAQEEIV-KAYEEYNTHGVTQ 718


>gi|257886072|ref|ZP_05665725.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821928|gb|EEV49058.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTASELGITAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIKNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|255659102|ref|ZP_05404511.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848546|gb|EEX68553.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 650

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 118/367 (32%), Gaps = 119/367 (32%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  + D++A      G +V                           L  
Sbjct: 16  PSAKLHIGHAYCTTIADSIARFHRLIGDDVF-------------------------FLTG 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +                      D++  ++    EE  +  ++   V  ++   ++  K 
Sbjct: 51  S----------------------DEHGQKIQQKAEEAGVTPIE--YVDKIVAGFQNLWKR 86

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP-----PPKSKTTQ------ 300
           L+I +D FI      +     +++I + +  +G +Y+G        P +S  T+      
Sbjct: 87  LHISNDDFI--RTTQKRHERVVQEIFNRIYAKGDIYKGAYKGLYCTPCESYWTEHQLDEN 144

Query: 301 ---------KCDMDRKQLLFRSTMVGD----------DVDRPLLKSDGSYTYF---AADL 338
                      ++  +   F+ +   D          D  +P+ + +    +      DL
Sbjct: 145 GCCPDCHRPVQEVSEEAYFFKMSKYADRVLQYIEDHPDFIQPVSRRNEMINFIKQGLDDL 204

Query: 339 AYFKCKYERGF------DNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKK 378
              +  +  G        ++IYV                +    + K   A    V ++ 
Sbjct: 205 CISRTSFNWGIPVPIDPKHVIYVWFDALTNYLTPIGFLDAPEKFH-KYWPADLHLVGKEI 263

Query: 379 AQINVLLCELVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + ++   + +  D                  KMSK  G+ +    ++DE G+D++R+
Sbjct: 264 VRFHTIIWPCILMALDLPLPKKVYGHGWLIVDGDKMSKSKGNVVDPNGLIDEFGADAIRY 323

Query: 425 MMLWRKN 431
            +L   N
Sbjct: 324 FLLREIN 330


>gi|148654314|ref|YP_001274519.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566424|gb|ABQ88569.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 48/209 (22%), Gaps = 33/209 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L +       +            I     N TG +H+GH     + D L       G
Sbjct: 22  EQRLYAWWERSGFFTPPETFDRPPFVISMPPPNVTGELHMGHAMFVAIEDVLTRWHRMLG 81

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                           +   ++   + ++ L +      +        +    E  +KY 
Sbjct: 82  DPTL-------WLPGTDHAGIATQLQVERLLQSEGVTRQQIGREAFLRRT--WEWKEKYG 132

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            E                        I   L+ L    D               +R    
Sbjct: 133 GE------------------------ITRQLRRLGASCDWTRERFTLDPMLSRAVRAAFK 168

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L   G +Y G      S   Q    D +
Sbjct: 169 RLYDDGLIYRGYRMVNWSPNLQTAVSDLE 197



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            E G+D +++         V R+  +   ++ K     V L  LV   RD    KMSK  
Sbjct: 501 METGYD-ILFFW-------VARMMMMGCYLTGKTPFHTVYLHGLV---RDKDGRKMSKTY 549

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           G+ +    V+++ G+D++RFM+    + 
Sbjct: 550 GNVVNPLDVIEQHGADALRFMLATSSSP 577


>gi|325295640|ref|YP_004282154.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066088|gb|ADY74095.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 875

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 66/232 (28%), Gaps = 45/232 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS----ANPTGPMHVGHCRCAVVG 147
             +P+          +    +  +          +F       N TG +HVGH   + + 
Sbjct: 5   TYNPALFEDKWYRFWIEKGYFHADEKKVLRGEKPKFSVVLPPPNVTGVLHVGHALNSTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +       G+EV      + AG       ++  W  ++ L                  
Sbjct: 65  DIICRWKRMKGFEVCWIPGTDHAG-------IATQWVVEREL------------------ 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                   K      +   E++L  V  +  Q   +II   LK L    D          
Sbjct: 100 -------AKEGLTRHDIGREEFLERVWKWKDQYGSRIINQ-LKKLGTSCDWSRERFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLF 311
           G    ++     L ++G +Y G              S    + + ++  L +
Sbjct: 152 GFSKAVKKAFVTLYKEGLIYRGKRLINWCPRCHTALSDLEVEHEEEQGNLWY 203


>gi|237740858|ref|ZP_04571339.1| glutamyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431155|gb|EEO41367.1| glutamyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 510

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 46/297 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
                K     V+ +PTG  HVG    A+          GD +  +      +  R  Y 
Sbjct: 2   CDNCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNGGDFILRI-----EDTDRNRYT 56

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             AG++   +  ++ W         D     G   G Y +    +L  KY+ EL+     
Sbjct: 57  --AGSE-QMIFDALKWLDLNYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG- 108

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +        ++ + +  +     L   +D         + +       I+   + G  Y
Sbjct: 109 AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPY 157

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  
Sbjct: 158 VIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLM 211

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 212 GITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 261


>gi|269926588|ref|YP_003323211.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790248|gb|ACZ42389.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 891

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 87/255 (34%), Gaps = 45/255 (17%)

Query: 335 AADLAYFKCK--YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF      E G+D +I++        V R+  +      +    +V     V   
Sbjct: 474 TDDLRYFYPTSVMETGYD-IIFLW-------VHRMIFMGLHFMGEVPFFDVYFHGTV--- 522

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    +MSK  G+ +    + ++ GSD++RF ++        D      + ++  N   
Sbjct: 523 RDEKGQRMSKTKGNVLDPTEITEQYGSDALRFALIT-SAPAGSDMKLGIQRVEAMRNFAN 581

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            +  A    R + R  +D   +   D  P     +++      +     ++   R I + 
Sbjct: 582 KIWNA---TRYVIRACEDSQIETGPDGDPLPTSSEDATLADKWI-----ISRLHRTIRDV 633

Query: 513 TIAQEPYKLAFY--------LYDLASVF--HGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
           T   E      Y        LYD    F    +     E+ ++     N       R  L
Sbjct: 634 TNMME-----RYQLHEAGRRLYD----FIWSEYCDWYIESTKVVLAGDNEPAKRAARQTL 684

Query: 563 VHAVASIINSGLNII 577
           V+    ++   L ++
Sbjct: 685 VY----VLERALRLL 695


>gi|325267260|ref|ZP_08133922.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981197|gb|EGC16847.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 941

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 114/366 (31%), Gaps = 55/366 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
            + L    + ++ P      +Q+M++      + R       +           H     
Sbjct: 447 DNALKAVDDTEFFPAWGRARLQSMIEGRPDWVVSRQRFWGTPMTLFAHKETGSLHPNSAE 506

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            + ++   + ++G      L   +  + + C+   K        + D +D   +  D   
Sbjct: 507 LLEEVAKRIEQKGINAWFELDKAELLSPEDCEQYDK--------LPDTMD---VWFDSGS 555

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F+      K + E  +   +Y+ GSD   G+ +       A   +     +L    V 
Sbjct: 556 THFSV----LKQRPELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAPYKQLLTHGFVV 611

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V +E G+D +R        S  L      +K  ++   
Sbjct: 612 ---DGNGRKMSKSLGNVIAPQAVYNEFGADILRLWTANTDYSGELSISNEILKRVTE--- 665

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                  Y R R+          D D  +     +    E D   L L   L       E
Sbjct: 666 ------MYRRIRNTLSFLFANLKDFDR-IEDAVPLADMVEIDRYALVLARRLQ------E 712

Query: 511 NATIAQEPYKLAFYLY-----DL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                  P     Y +     DL    +      +    ++ RL   QA++      +  
Sbjct: 713 KLAGEYYP----RYAFHFAVQDLVQFCSEDLGSFYLDILKD-RLYTTQADSHARRSAQTA 767

Query: 562 LVHAVA 567
           L H   
Sbjct: 768 LYHITR 773


>gi|282851118|ref|ZP_06260492.1| leucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282558070|gb|EFB63658.1| leucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 804

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 106/330 (32%), Gaps = 55/330 (16%)

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE---- 262
           KH+  +  D   +E       +WL         A  K +   L+  +     +  E    
Sbjct: 374 KHINSDFLDGLDNEEAKKRMIEWLE-----DHNAGQKKVNYKLRDWDFSRQRYWGEPIPV 428

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             +  G  S + +  D L  +      I P    ++      D   ++ ++   G     
Sbjct: 429 IHWEDGTTSLVPE--DELPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGKRETN 486

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVA 371
            +    GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V 
Sbjct: 487 TMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVL 546

Query: 372 AAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMM 426
             +     +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M
Sbjct: 547 YDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                   +D+D           P               ++  D    L  +      IP
Sbjct: 602 FMGPLDASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIP 641

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           QE   D ++ +L      Y   ++  T   
Sbjct: 642 QERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|167629315|ref|YP_001679814.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592055|gb|ABZ83803.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 668

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/454 (13%), Positives = 135/454 (29%), Gaps = 91/454 (20%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           + S NP    H+GH    V  DT+A      G +V     +++ G +I   A        
Sbjct: 17  YPSGNP----HIGHAYTTVATDTMARYKRLRGCDVWFLTGLDEHGQKIERAAQG------ 66

Query: 187 QALYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK-- 243
                     P  Y  P         E  +    + +   EE+    V+    +   K  
Sbjct: 67  ------KGMAPIDYLDPVAVTFKKLWERLEITYDDFIRTTEERHKKAVQVIFQKIWDKGD 120

Query: 244 IIRDDLKALNIQHDIFIS-EDDFHRGDPSP-----IRDIIDNLARQGYVYEGILPPPKSK 297
           I + + +            E     G+            ++ +  + Y +       +  
Sbjct: 121 IYKSEYEGWYCTPCEAFWPERQLKIGEKGEKLCPDCDRPVERMKEESYFFRMSKYADRLL 180

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDN 351
              + + +  Q + R   +   + + L            DL   +  ++ G       ++
Sbjct: 181 QHIEENPEFIQPVSRRNEMVSFIKQGL-----------EDLCVSRTTFKWGIPVPINANH 229

Query: 352 MIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--- 394
           +IYV              GSD     +R   A    V +   + + ++  ++ +      
Sbjct: 230 VIYVWFDALSNYITALGYGSDDDEKYRRYWPADIHLVGKDIVRFHTIIWPIILMALGEPL 289

Query: 395 -----------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                          KMSK  G+ +    + D  G D+ R+ ++ R+     D  F +  
Sbjct: 290 PKQVFSHGWFLLESGKMSKSKGNVVDPFMLADRYGVDAFRYFLI-REMIGGQDALFSEET 348

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL-IVHL 502
             S+ N             ++  ++  +       +        E   +    +L    +
Sbjct: 349 LISRINTDL-----ANDLGNLLHRSLSMVERFSGGIVRAPEAAAEGPLEKEIRELTAKTV 403

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536
           A++      A + +         ++LA+     W
Sbjct: 404 ADFG-----ALMDR---------FELANAHSALW 423


>gi|194334583|ref|YP_002016443.1| glutamyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693302|sp|B4S404|SYE_PROA2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|194312401|gb|ACF46796.1| glutamyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 503

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 102/295 (34%), Gaps = 24/295 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G +        D   ++     S+    +++
Sbjct: 14  APSPTGYLHVGGLRTALYNYLYA---KKVGGDFIVRIEDTDQARKVEGADQSLLKTLEES 70

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y++    +   +Y  +LL+     +        +    K+    
Sbjct: 71  GIVADESILHGGNFGPYMQSERLDTYAQYCRQLLDQN-NAYYCFSTAEELDENRKLQMK- 128

Query: 249 LKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + +  +++  ++ E        S I+  +D     G  Y   +  P   +    D+ R 
Sbjct: 129 -QGIQPKYNRKWLPETMGGNMPQSEIQKKLDE----GAPYVIRMKVPDYISIMFEDIVRG 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F S  V    D+ L+KSDG  TY     A     +     ++I   G +    + + 
Sbjct: 184 PVEFDSATVD---DQVLMKSDGFPTYHF---ASVIDDHLMEITHIIR--GEEWLSSMPKH 235

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             +      +  +        + L  +    K+SKR GD      +      D++
Sbjct: 236 LLLYEFFGWEAPRFAH-----LPLLLNPDRSKLSKRQGDVAVEDFIAKGYSPDAI 285


>gi|116629123|ref|YP_814295.1| leucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311111095|ref|ZP_07712492.1| leucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273879|sp|Q045L5|SYL_LACGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116094705|gb|ABJ59857.1| leucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311066249|gb|EFQ46589.1| leucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 804

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 106/330 (32%), Gaps = 55/330 (16%)

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE---- 262
           KH+  +  D   +E       +WL         A  K +   L+  +     +  E    
Sbjct: 374 KHINSDFLDGLDNEEAKKRMIEWLE-----DHNAGQKKVNYKLRDWDFSRQRYWGEPIPV 428

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             +  G  S + +  D L  +      I P    ++      D   ++ ++   G     
Sbjct: 429 IHWEDGTTSLVPE--DELPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGKRETN 486

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVA 371
            +    GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V 
Sbjct: 487 TMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVL 546

Query: 372 AAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMM 426
             +     +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M
Sbjct: 547 YDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                   +D+D           P               ++  D    L  +      IP
Sbjct: 602 FMGPLDASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIP 641

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           QE   D ++ +L      Y   ++  T   
Sbjct: 642 QERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 927

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + + AV+ +     VL    +    D    KMSK  G+ +   
Sbjct: 554 LYLEGSDQHRGWFNSSLSTSVAVTGRAPYRAVLTHGFLV---DEKGRKMSKSLGNVVDPL 610

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ ++G+D +R  +        L      +K+ S+         AY + R+  R     
Sbjct: 611 KVIQQLGADILRLWVSSADYKSDLAVSQNILKQLSE---------AYRKIRNTCRFLLSN 661

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D      + +  E   +     L+  L      + NA    E + +
Sbjct: 662 IYDFDPS---ADQVAYEKMVELDRWALLK-LHRLIEKVLNAYHDYEFHVV 707


>gi|227512284|ref|ZP_03942333.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227084459|gb|EEI19771.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 675

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 106/343 (30%), Gaps = 66/343 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWRYQQ 187
           P+G +H+G+    +  D +A      GY+V      ++ G +I    + L ++      +
Sbjct: 17  PSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQKADKLGMAPQAYVDK 76

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     +             +  +K  +++    +++    + +Y+          
Sbjct: 77  MAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYLGEYTGWY------- 129

Query: 248 DLKALNIQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                ++  + + +E      +R D   +          G    G       + +    M
Sbjct: 130 -----SVSDEEYFTESQLAEVYRDDDGKVIG--------GKAPSGHEVQLVHEQSYFFKM 176

Query: 305 DRKQLLFRSTMVG-DDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMI 353
            +     R       D  +P  + +     F      DLA  +  +  G        +++
Sbjct: 177 SKYADWLRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVV 236

Query: 354 YVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV               G D S + K   A    V ++  + + +   ++          
Sbjct: 237 YVWIDALSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPK 296

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                        KMSK  G+ I    ++D  G D++R+ +L 
Sbjct: 297 TVYGHGWLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLR 339


>gi|167039498|ref|YP_001662483.1| glutamyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915252|ref|ZP_07132567.1| glutamyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725176|ref|YP_003904927.1| glutamyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687612|sp|B0K5F4|SYE1_THEPX RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|166853738|gb|ABY92147.1| glutamyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888976|gb|EFK84123.1| glutamyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582237|gb|ADN55636.1| glutamyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 485

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 41/286 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTG +H+G+ R A+     +       ++     ++ R         +   L    +
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSS------KEFEELIFKEL 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P G Y       +  + A K   E   +   +     ++      
Sbjct: 63  EWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAY---RCYCTPEELEEDRR 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + R D+   + +      E +             +   R+G         P  +  + 
Sbjct: 120 KAVERGDIPRYSGRCRYLTKEQE-------------EAFIREGRKPVIRFIIPDDEVIEF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH 
Sbjct: 167 EDMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +   +  A+  +  +          L       K+SKR G+ 
Sbjct: 220 YNTPKQILIYKALGFEIPKFAH-----APLILGPDRTKLSKRHGNT 260


>gi|94263446|ref|ZP_01287259.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456176|gb|EAT06315.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 898

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      ++   +   L       +I     N TG +HVGH     + D L       G
Sbjct: 17  EQRWYQSWLAQKNFRATLDEDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQG 76

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V      + AG     +                               V ++LAD+  
Sbjct: 77  YNVLWLPGTDHAGIATQNV-------------------------------VERQLADQ-G 104

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   E+++  V  +  ++  +II   LK L    D          G  + ++ +  
Sbjct: 105 QSRHKLGREQFIERVWQWKEESGGQIINQ-LKRLGCSCDWDRERFTLDAGLSAAVKKVFV 163

Query: 279 NLARQGYVYEG 289
            L R+G +Y+G
Sbjct: 164 QLYREGLIYKG 174



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     ++    +V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 494 WVARMMMMGLHFMDEVPFRHVYLHALV---RDKHGQKMSKSKGNVLDPLELMDRYGTDAL 550

Query: 423 RFMM 426
           RF M
Sbjct: 551 RFTM 554


>gi|29374703|ref|NP_813855.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|61216301|sp|Q839V5|SYC_ENTFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29342161|gb|AAO79927.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 124/412 (30%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +  +
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLE 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|83942601|ref|ZP_00955062.1| glutamyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846694|gb|EAP84570.1| glutamyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 466

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 120/415 (28%), Gaps = 73/415 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T   +   + +PTG +H+G  R A+     A      G +        D          +
Sbjct: 2   TTPVVTRFAPSPTGYLHIGGARTALFSWLYAR---GRGGKFLLRIEDTDRQRHTPEATEA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +         ++D D+   +        V  +L  +       F  ++ +   +D +   
Sbjct: 59  ILQGMAWLGLDHDGDVVSQFENAPRHAEVALQLLAE-GKAYKCFASQEEIAAFRDQAKAE 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +                  + H   P  +R                +  P +  T 
Sbjct: 118 GRSTLYQSPWRDAAP--------ETHPDAPYVVR----------------IKAPLTGETV 153

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  ++  +  +    D  LL+SDGS  Y    LA     ++ G  ++I   G DH
Sbjct: 154 IRDAVQGDVVIGNDQLD---DMVLLRSDGSPVYM---LAVVVDDHDMGVTHVIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR--------- 411
                R   +  A+        V +   + L       K+SKR G               
Sbjct: 206 LNNAARQMMIYNAMGWD-----VPVWAHIPLIHGADGKKLSKRHGALGAQEYQAMGFPAA 260

Query: 412 ------------HVVDEVGSD--SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                       H  DE  +D  +  +  L         FD  K++           Q+ 
Sbjct: 261 GMRNYLARLGWSHGDDEFFTDTQAQEWFDLDGIRKSPAQFDLKKLENICG-------QHI 313

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            A   +  R   +I   L     P     Q    + +   L     ++P ++E A
Sbjct: 314 AAADDAALR--HEIEAYLTAAGLPALTKAQADGLERAMYCLKDRAKKFPDLLEKA 366


>gi|332300690|ref|YP_004442611.1| glutamyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177753|gb|AEE13443.1| glutamyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 510

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 30/283 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWR 184
           + +PTGP+H+G  R A+     A     +G  +       D+   +    + +  ++ W 
Sbjct: 7   APSPTGPLHIGGVRTALFNYLFAR---HNGGTMVLRIEDTDSKRFVPGAEDYIIEALRWL 63

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             +      SD       G Y +   +++  +Y  +L+      +      +     ++ 
Sbjct: 64  GIEIDEGIGSD---NQPYGPYRQSERRDIYREYVQQLIEQGAAYY-----AFDTVEELEQ 115

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R ++   +  +D   S     R   S   + +  L   G  Y         +  +  D+
Sbjct: 116 ARQEMPNFS--YD--ASTRSKMRNSLSLPSEEVTRLLESGEEYVVRFKVDPDREVEVDDL 171

Query: 305 DRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            R +++  ST +    D+ L KS D   TY    LA     +     ++I   G +    
Sbjct: 172 IRGKVVISSTQLD---DKVLYKSADDLPTYH---LANIVDDHLMQITHVIR--GEEWLPS 223

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                 +  A   K +        L+   +     K+SKR GD
Sbjct: 224 APLHVLLYEAFGWKDSMPQFAHLSLLLKPQGSG--KLSKRDGD 264


>gi|304383075|ref|ZP_07365550.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335761|gb|EFM02016.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 1143

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 69/195 (35%), Gaps = 26/195 (13%)

Query: 261 SEDDFHRGDPSPIRDIIDN---LARQGYV--------YEGILPPPKSKTTQKCDMDRKQL 309
           S ++ +      +   +     L  +G+V        YE I              +  + 
Sbjct: 549 SLEELYAEIEKSVNAGVMKTNPLKEKGFVPGDYSKENYERIDMHRPYVDHIVLVSNTGKA 608

Query: 310 LFRSTMVGDDVDRPLLKSDGSY----TYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYV 364
           L R T + D        S         Y   +      +     D  I   G D   G+ 
Sbjct: 609 LKRETDLID----VWFDSGAMPYAQVHYPFENKEAIDNRLAFPAD-FINE-GVDQTRGWF 662

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             L A+A  V +  A  NV+   LV    D    KMSKR G+ +    ++D+ G+D+VRF
Sbjct: 663 FTLHAIATMVFDSIAFKNVISTGLV---LDAKGNKMSKRVGNVVNPFDMIDKYGADAVRF 719

Query: 425 MMLWRKNS-ELLDFD 438
            M+      + L FD
Sbjct: 720 YMMTNSEPWDNLKFD 734


>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 486

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 108/336 (32%), Gaps = 66/336 (19%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A+V D L   + +SG+                     V    +     +D  +
Sbjct: 37  HIGHARSALVFDVLRRYLEYSGF---------------------VVEFAKNFTDVDDKII 75

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR--DDLKALNI 254
                 GV  +HV     + Y  ++           ++  + + + +I+R  D L A  +
Sbjct: 76  KRAKEQGVSCEHVTTTYINAYYEDMEKLG--VRRATLEPRATEHIAEIVRLVDTLLAKGM 133

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK-----QL 309
            + +              +   +D  A  G + +  +   ++      D  ++      L
Sbjct: 134 AYRV-----------DGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDERKRHPMDFAL 182

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYV 364
              S       D P     G   +     A         FD  I+  G D     H   +
Sbjct: 183 WKGSKPGEPSWDSPW--GQGRPGWHIECSAMAMRHLGETFD--IHGGGMDLIFPHHENEI 238

Query: 365 KR-LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV 417
            +   A     +        +    V++ ++    KMSK  G+F T+R +       D V
Sbjct: 239 AQSCGATGKEFARYW-----VHNGFVQINQE----KMSKSLGNFFTIREIFQKSEWPDTV 289

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
             + +R+ +L       LDF    +KE       FY
Sbjct: 290 TGEMLRYFLLTTHYRSPLDFSDQSLKEAKNALNGFY 325


>gi|262068158|ref|ZP_06027770.1| glutamate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378137|gb|EFE85655.1| glutamate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 510

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 129/406 (31%), Gaps = 62/406 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIND 169
              K     V+ +PTG  HVG    A+          GD +  +      +  R  Y   
Sbjct: 4   DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHANNGDFILRI-----EDTDRNRYT-- 56

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            G++   +  ++ W         D     G   G Y +    +L  KY+ EL+      +
Sbjct: 57  EGSE-QMIFDALKWLDLDYAEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG-AY 110

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   ++ + +  +     L   +D             S  ++ I+   + G  Y  
Sbjct: 111 YCFCDQERLENLRERQKAM--GLPPGYDGHC---------RSLTKEEIEEKLKAGIPYVI 159

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  G 
Sbjct: 160 RLKMPYEGETVIHDRLRGDVVFENSKID---DQILLKADGFPTYH---LANIVDDHLMGI 213

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR------ 403
            ++I     +      +   +  A      +   +      L R+    K+SKR      
Sbjct: 214 THVIR--AEEWIPSTPKHIQLYKAFGWDAPEFIHM-----PLLRNDDRSKISKRKNPVSL 266

Query: 404 ---AGDFITLRHVVDEVGSDSVRFMM---LWRKNSELLDFDFCKVKEQSKENPVF-YVQY 456
                +      +V+ +G     +     ++       +F+  KV       PVF  V+ 
Sbjct: 267 IWYKEEGYLKEGLVNFLGLMGYSYGDGQEIFSLQEFKDNFNIDKVTL---GGPVFDLVKL 323

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +   + +  +  D    L    F +            E + +  +
Sbjct: 324 GWVNNQHMKMKDLDELTRLTIPFFVQEGYLANENVSEKEFETLKKI 369


>gi|268324999|emb|CBH38587.1| putitive methionyl-tRNA synthetase, partial sequence [uncultured
           archaeon]
          Length = 539

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 81/530 (15%), Positives = 154/530 (29%), Gaps = 103/530 (19%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL- 179
             V +        G  H+GH R  V  D    ++   G++V      +  G  I   A  
Sbjct: 7   KPVLVTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGHDVIFISGSDTHGTPIVLSAEA 66

Query: 180 ------SVFWRYQQALYNNDSDLPEGY-YPG-----------------------VYLKHV 209
                 +V  R+          L   + Y G                       VY++  
Sbjct: 67  EGIAPEAVVARFHDHFKRIFKALNVDFDYYGQTNSECNHKRTGEIVKKLIDSGYVYMEET 126

Query: 210 GKELADKYSSELLNFPEEKWLPIV--------KDYSVQAMMK---------IIRDDLKAL 252
            +   D     L +   E   P           D      ++          I  +    
Sbjct: 127 KQAFCDTCGRFLPDRYVEGECPYCGASARGDECDQGCGKHLEPGEIIAPKCKICGNEAVF 186

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
             Q   F     F       +   +DNL              K +    C   +     +
Sbjct: 187 KEQEHFFFHLSRF----ADFLASYLDNLGGTRNARNYAREWVKKELRDWCITRKLDWGVK 242

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLA-----YFKCKYERGFDNMIYVMGSD---HSGYV 364
                D V    + +   Y  F  +L       ++  ++     +++ +G+D   H    
Sbjct: 243 FPGREDLVVYVWVDAPIGYISFTEELMGGDERKWREYWKEDGATIVHFIGTDIIYHHCIF 302

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
               A+            V+   +V++  DG     SK  GD +     ++    D++R+
Sbjct: 303 --WPAMLKGAGYSLPD-AVVASGMVKI--DGRT--FSKSRGDVVWTSDFLERFHPDTLRY 355

Query: 425 MMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
            ++ + + ++ L+F +     +     V  +     R  S   +   + P+ + D     
Sbjct: 356 YLVAQSSHTKELNFSWNSFFLRVNNELVGILGNLVHRVVSFAYKNFGVVPEGEIDEAVIT 415

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543
            I +  E                  I NA    E  KL   +  LA   +G++   RE P
Sbjct: 416 KITETRE----------------EAI-NAVEEYEFKKLVDAVMKLADFGNGYFQ--REEP 456

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG-----VES--PNEMS 586
                + +  +              II + L I+      +E+  P +M+
Sbjct: 457 WHLIKKGDKERERG---------GEIIKNVLQILKAVCILLEAVMPEKMA 497


>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 489

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 98/331 (29%), Gaps = 46/331 (13%)

Query: 126 EFVSANPTGPM------------HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           EFV  NP   +            HVGH R  +V DT    +   GY+VT           
Sbjct: 13  EFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYDVT-------FVRN 65

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              +   +  R ++     D       Y   Y + +                E +    +
Sbjct: 66  FTDVDDKIINRAKEECT--DFMTIANRYIASYYRDMEAIRVKPADV------EPRVTEHM 117

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K+  V  +  +I     A     D++ S   F   D   +          G         
Sbjct: 118 KEI-VDVIQSLIEKGY-AYESDGDVYFSVRSF--KDYGKLSKRSPEEMEAG-----ARVE 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P  K     D     L   +       D P  K  G   +    +A       +     I
Sbjct: 169 PSEKKRDPLDF---ALWKSAKAGEPSWDSPWGK--GRPGWHTECVAMIF----KHLGETI 219

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            + G          E   A       +          L   G   KMSK  G+++TL+ +
Sbjct: 220 DIHGGGLDLVFPHHENEIAQAEAVTGKPFARYWMHNGLVTVG-GQKMSKSLGNYVTLKEI 278

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
             +   D +R ++L+      LDF + K++E
Sbjct: 279 YTKYHPDILRLLVLFTHYRSPLDFSWEKMEE 309


>gi|294155759|ref|YP_003560143.1| glutamate--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599958|gb|ADE19454.1| glutamate--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 468

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 99/284 (34%), Gaps = 45/284 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L         +    +   +Q+  LA 
Sbjct: 9   APSPTGYLHIGGARTALFCYLFAKHFNGDFIFRLED----TDVKRNVADGEKSQLENLAW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S   +      Y +    E  D+Y     +  ++ +     D +  
Sbjct: 65  L-------GIIPDESPFKKARGISAYRQ---SEKLDRYLEIAHDLIDKGFAYKAYDTT-- 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                  D+L+A   + D        +  +   +     +   +   Y   L  P +   
Sbjct: 113 -------DELQAQKDESDAKGIPSFRYNKNWLKLSASEISKRDKNKEYSIRLRMPDNVVY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R ++ F S  +GD     + KSDG  TY   + A     Y+    +++   G +
Sbjct: 166 EWDDIVRGKISFNSNDLGDW---VIYKSDGYPTY---NFAVVVDDYDMKITHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           H G   +  A+   +   K Q        + +  +    K+SKR
Sbjct: 218 HIGNTPKQLALYDMLKWSKPQFGH-----LTIITNMEGQKLSKR 256


>gi|15829153|ref|NP_326513.1| glutamyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|1711627|sp|P53662|SYE_MYCPU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|496154|gb|AAA65629.1| glutamyl tRNA synthetase [Mycoplasma pulmonis]
 gi|14090097|emb|CAC13855.1| GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
           [Mycoplasma pulmonis]
          Length = 468

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 110/326 (33%), Gaps = 52/326 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         +    +   +QI  L  
Sbjct: 9   APSPTGYLHIGGARTALFNYLLAKHYNGDFIIRIED----TDVKRNIADGEASQIENL-- 62

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W   +A   N+S L      G Y +    E   K + EL+           K Y   
Sbjct: 63  --KWLNIEA---NESPLKPNEKYGPYRQSQKLEKYLKIAHELIEKG-----YAYKAYDNS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  +   + L +           ++ D   I +           Y   +  PK+ T 
Sbjct: 113 EELEEQKKHSEKLGVA-------SFRYQRDFLKISEEEKQKRDASGAYSIRVICPKNTTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           Q  D+ R  +   S  +GD +   ++KSD   TY   + A      +    +++   G +
Sbjct: 166 QWDDLVRGNIAVNSNDIGDWI---IIKSDDYPTY---NFAVVIDDIDMEISHILR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +   ++  K      L   + +  +    K+SKR        H   E G 
Sbjct: 218 HITNTPKQMMIYDYLNAPKP-----LFGHLTIITNMEGKKLSKRDLSLKQFIHEYKEEGY 272

Query: 420 DS-VRFMMLW------RKNSELLDFD 438
           +S   F  L        K  EL+D D
Sbjct: 273 NSQAIFNFLTLLGWTDEKARELMDHD 298


>gi|315224878|ref|ZP_07866698.1| isoleucine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945153|gb|EFS97182.1| isoleucine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 1135

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 31/174 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A +V    A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 643 GVDQTRGWFYTLHAIATSVFNSVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFTTIA 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D+ R+ M+   N  + L FD   V E  ++          F+  YA          
Sbjct: 700 EYGADATRWYMISNANPWDNLKFDLEGVAEVRRKFFGTLYNTYSFFALYANT-------- 751

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYK 520
             D F   + D+ P    P+   +  SEL  LI         ++      EP +
Sbjct: 752 --DSFTYAEADI-PLAERPEIDRWILSELNTLIKE-------VDALYADYEPTR 795


>gi|309777271|ref|ZP_07672233.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914951|gb|EFP60729.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 446

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 113/352 (32%), Gaps = 39/352 (11%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              L + +   +E  + L      + +           H+G+ R  VV DTL       G
Sbjct: 1   MMKLFNSMNQKVEEFKPLHEHEVHMYV--CGPTVYNYPHIGNARPIVVFDTLKRTFQAIG 58

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V       D   +I  +A                   E       +     +  +K  
Sbjct: 59  YNVKMVSNYTDVDDKIIKVA------------------KECGVSEADITEKFIDAYNKDR 100

Query: 219 SELLNFPEEKWLPIVKDY-SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
             L     +    + +   ++ A +K++ D   A  I  D++   +          + + 
Sbjct: 101 LSLHAMMPDAAPRVTETMDAIIAFIKLLVDKGNAYEIDGDVYFRVNSVESYGKLSNQQVE 160

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           D L        G      SK     D      L++ T  G   D P   S G   +    
Sbjct: 161 DLLV-------GARIDENSKKENPLDF----TLWKKTEEGIQWDSPW--SVGRPGWHTEC 207

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +     ++    ++ I + G          E  +A + +   + I         +  DG 
Sbjct: 208 VVMINQEFHD--EHTIDIHGGGMDLKFPHHENEIAQSRAAYDSPIANYWIHNGMVNIDGE 265

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             KMSK  G+ I  + ++ ++G + +R++ML       L+ +   ++   KE
Sbjct: 266 --KMSKSLGNVIWAKDMIAKIGGNVLRWVMLSAHYRAPLNINEEAIETAKKE 315


>gi|294852413|ref|ZP_06793086.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294821002|gb|EFG38001.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 544

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 110/364 (30%), Gaps = 34/364 (9%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N +        +L +      + G   I    K  I    A P G  H+GH    +  D 
Sbjct: 6   NFF--SRAYHALLRARASKHRKTG--SIMSREKYYITTAIAYPNGKPHIGHAYELIATDA 61

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLAL--------------SVFWRYQQALYNNDSD 195
           +A     +G +V      ++ G ++   A               S F R  + L +++ D
Sbjct: 62  MARFQRLNGMDVYFLTGTDEHGIKMLQSARKEGITPRELADRNTSAFRRMAEVLNSSNDD 121

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                    Y        A   + ++       W  +  +         +R D      Q
Sbjct: 122 YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSVRDEAYYGEEETEVRADGVRYGPQ 181

Query: 256 HD--IFISEDDFHRGDPSPIRDIIDNLARQGY------VYEGILPPPKSKTTQKCDMDRK 307
                ++ E+ +     +    ++D L                +        +   + R 
Sbjct: 182 GTPVEWVEEESYFFRLSAYQDKLLD-LYENNLGFIMPAERRNEIVSFVKSGLKDLSISRT 240

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--MIYVMGSDHSGYVK 365
              +   + GD+     +  D    Y  A L Y     ER        +++G D    + 
Sbjct: 241 TFDWGIPVPGDEKHVMYVWVDALTNYITA-LGYPDTTDERWAYWPANAHIIGKD----IS 295

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R  AV        AQ+ +        +      KMSK  G+ I    +V+  G D +R+ 
Sbjct: 296 RFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYF 355

Query: 426 MLWR 429
           ++  
Sbjct: 356 LMRE 359


>gi|256546102|ref|ZP_05473455.1| glutamate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398219|gb|EEU11843.1| glutamate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 493

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 98/291 (33%), Gaps = 34/291 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       L+     + TR +        + TL  S  
Sbjct: 9   APSPTGYLHIGGLRTALFNYLYARHTGGKMLLRIEDTDRTR-FVEGALENLLKTLKWSGI 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  + + + ++ E    G Y++   V   + DKY  +L+   +  +        +  
Sbjct: 68  EIDEGVMLDENGEITEKGNCGPYIQSDRVKAGIYDKYIEKLIEEGK-AYYCFCSKERLDN 126

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    + D   L  ++D             S   D        G  Y   L  PK     
Sbjct: 127 LRARQKAD--GLTPKYDGLC---------RSLTLDEAKEKIANGEKYTVRLKLPKDTDIS 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + ++ F +    D  D+ L+K DG  TY     A     +E G  ++  V G + 
Sbjct: 176 FEDRIKGKITFNTN---DMDDQVLIKEDGYPTYHF---AVIVDDHEMGITHV--VRGDEW 227

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                +   +  A   +  +        +    +    K SKR GD +   
Sbjct: 228 ISSTPKHVFLYQAFGWEAPEYIH-----LPTVLNKDHKKYSKRNGDGMVED 273


>gi|224534475|ref|ZP_03675051.1| valine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514152|gb|EEF84470.1| valine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 875

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 66/213 (30%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S+  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KSFEDEIYNKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDILVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  + +D          L     +L 
Sbjct: 70  RMKKHNTLWLFGTDHAG----IATQAVFERHLKNIGKSKNDF-----EREELVQEIFKLK 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK+                          +I D +K L   +D          G    + 
Sbjct: 121 DKHR------------------------GVIVDQIKKLGASYDHSRERFTLDEGLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|182420024|ref|ZP_02951258.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669576|ref|ZP_04529556.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376061|gb|EDT73648.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655020|gb|EEP52580.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 647

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 76/499 (15%), Positives = 152/499 (30%), Gaps = 141/499 (28%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D +A     +GY+V                              
Sbjct: 18  PSTKLHIGNTYTTVAADAIARFKRLTGYDV--------------MFLTGT---------- 53

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK +  ++   V  ++  I+D  K 
Sbjct: 54  -----------------------DEHGQKIQRIAEEKGITPIE--HVDEIVAGIKDLWKM 88

Query: 252 LNIQHDIFI-SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK--------------- 295
           +NI +D FI + DD+H      ++DI   L  QG +Y+                      
Sbjct: 89  MNISYDKFIRTTDDYH---VKAVQDIFKKLYDQGDIYKSSYEGWYCTPCESFWTDTQLVN 145

Query: 296 ----SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----------KSDGSYTYFAA----D 337
                          +   F+ +   D + + +           + +     F      D
Sbjct: 146 GNCPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEEHPHFIQPESRKNEMLNNFLRPGLQD 205

Query: 338 LAYFKCKYERG----FD--NMIYVM-----------GSDHS---GYVKRLEAVAAAVSEK 377
           L   +  ++ G    FD  +++YV            G        Y K   A    + + 
Sbjct: 206 LCVSRTSFDWGVPVTFDEKHVVYVWIDALSNYITALGYGQDNKELYDKFWPADVHLIGKD 265

Query: 378 KAQINVLLCELVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             + + +   ++ +  D                  KMSK  G+ +    +V+E G D VR
Sbjct: 266 ILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNEFGVDPVR 325

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L       + F    +      N   +++   +   +           +    F   
Sbjct: 326 YYLLRE-----IPFGADGL-----FNNEIFIKKINSDLCNDLGNLLSRTVAMIEKYFDGE 375

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQ-EPYKLA-FYLYDLASVFHGHWSHGRE 541
            IP ++E    + +LI      P  +E A      P  LA  ++++L    + +      
Sbjct: 376 -IPAQAEKGEFDDELINLALSTPAKVEEAVTELNLP--LALEHVFELIGRANKY-----I 427

Query: 542 NPRLRFVQANNRKLTMMRL 560
           +    ++ A +      RL
Sbjct: 428 DETTPWILAKDED-KKARL 445


>gi|148269355|ref|YP_001243815.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170288013|ref|YP_001738251.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|281411948|ref|YP_003346027.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|229558798|sp|A5IJ66|SYC_THEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558801|sp|B1L7Y7|SYC_THESQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147734899|gb|ABQ46239.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170175516|gb|ACB08568.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|281373051|gb|ADA66613.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 460

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 105/316 (33%), Gaps = 42/316 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +HVG+ R AVV D     + + GY V       D   +I   A  +              
Sbjct: 35  IHVGNARPAVVFDVFRRYLEYRGYRVIMVQNFTDIDDKIINKANQL-------------- 80

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                  GV  K V      +Y  +          P          +  I + ++ L  +
Sbjct: 81  -------GVDYKTVADTFIAEYWRDAHALGIR---PANFHPRTTDFVDDIVEIIERLVEK 130

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
              + +E   +          +    + G + +  +    +    + D  +K  L  S  
Sbjct: 131 GVAYQTETGVYFD--------VRKFEKYGELSKKKIEDLIAGARVEVDETKKFPLDFSLW 182

Query: 316 VGDDVDRPLLKS---DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVA 371
                  P  KS   +G   +               FD  I+  G D    + +  +A A
Sbjct: 183 KKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFD--IHAGGEDLVFPHHENEKAQA 240

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            A++ K      +   +VR   D    KMSK  G+  T+R  V   G D +R+M+L +  
Sbjct: 241 EALTGKVFARYWMHNGMVRFLGD----KMSKSTGNIFTVREAVKRYGRDGLRYMILSKHY 296

Query: 432 SELLDFDFCKVKEQSK 447
              +DF    +++ S+
Sbjct: 297 RSPMDFSEELLQDYSR 312


>gi|83953842|ref|ZP_00962563.1| glutamyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841787|gb|EAP80956.1| glutamyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 466

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 63/415 (15%), Positives = 122/415 (29%), Gaps = 73/415 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T   +   + +PTG +H+G  R A+     A      G +        D          +
Sbjct: 2   TTPVVTRFAPSPTGYLHIGGARTALFSWLYAR---GRGGKFLLRIEDTDRQRHTPEATEA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +         ++D D+   +        V  +L  +       F  ++ +   +D +   
Sbjct: 59  ILQGMAWLGLDHDGDVVSQFENAPRHAEVALQLLAE-GKAYKCFASQEEIAAFRDQAKAE 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               +                  + H   P  +R                +  P +  T 
Sbjct: 118 GRSTLYQSPWRDAAP--------ETHPDAPYVVR----------------IKAPLTGETV 153

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  ++  +  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH
Sbjct: 154 IRDAVQGDVVIGNDQLD---DMVLLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------I 408
                R   +  A+        V +   + L       K+SKR G               
Sbjct: 206 LNNAARQMMIYNAMGWD-----VPVWAHIPLIHGADGKKLSKRHGALGAQEYQAMGFPAA 260

Query: 409 TLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            +R+ +  +G           + +  +  L         FD  K++           Q+ 
Sbjct: 261 GMRNYLARLGWSHGDDEFFTDAQAQEWFDLDGIRKSPAQFDLKKLENICG-------QHI 313

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            A   +  R   +I   L     P     Q    + +   L     ++P ++E A
Sbjct: 314 AAADDAALR--HEIEAYLTAAGLPALTNAQADGLERAMYCLKDRAKKFPDLLEKA 366


>gi|66808845|ref|XP_638145.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996820|sp|Q54MZ8|SYMM_DICDI RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|60466665|gb|EAL64717.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 575

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 63/225 (28%), Gaps = 65/225 (28%)

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            ++ +I              GFIN+ L  +Y   +                    KV I 
Sbjct: 3   KLLKQISTTSTFKKPSSINNGFININLFKNYCTSVKQE--------------DKKKVLIT 48

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
                  GP H+GH   A++GD L     F G +                          
Sbjct: 49  TPIFYVNGPPHIGHLYSALLGDALGRWNRFIGNDT--------------LFMTGT----- 89

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                                       D++ S++    ++  L  +       +    R
Sbjct: 90  ----------------------------DEHGSKVDEAAKKNGLKTID--YCDKISNRFR 119

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           +     +I++D FI            +  I + L  +GY+Y+G+ 
Sbjct: 120 ELFDKADIKYDDFI--RTTEPRHKEAVTAIWNRLLERGYIYKGVY 162


>gi|69245493|ref|ZP_00603457.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879803|ref|ZP_05659456.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882529|ref|ZP_05662182.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891644|ref|ZP_05671297.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894121|ref|ZP_05673774.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614229|ref|ZP_05711999.1| cysteinyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559477|ref|ZP_05831658.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206628|ref|ZP_05921326.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289564989|ref|ZP_06445443.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293564124|ref|ZP_06678530.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570060|ref|ZP_06681140.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614954|ref|ZP_06694845.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294618278|ref|ZP_06697860.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294623060|ref|ZP_06701947.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940063|ref|ZP_07847246.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942530|ref|ZP_07849369.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949364|ref|ZP_07852705.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952824|ref|ZP_07855796.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993743|ref|ZP_07859088.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314994808|ref|ZP_07859940.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195744|gb|EAN10181.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257814031|gb|EEV42789.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818187|gb|EEV45515.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257828004|gb|EEV54630.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830500|gb|EEV57107.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074576|gb|EEW62897.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079121|gb|EEW66814.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163196|gb|EFD11042.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587432|gb|EFF19316.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592240|gb|EFF23858.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291595494|gb|EFF26805.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291597533|gb|EFF28697.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604042|gb|EFF33570.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590992|gb|EFR69837.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591843|gb|EFR70688.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595058|gb|EFR73903.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598751|gb|EFR77596.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640663|gb|EFS05243.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644195|gb|EFS08775.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGITAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIKNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|328957160|ref|YP_004374546.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673484|gb|AEB29530.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 881

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 54/207 (26%), Gaps = 34/207 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V  G+        K     +     N TG +H+GH     + D +       G
Sbjct: 18  AGRYEKWVEKGLFKPSGDKTKEAYSVV-IPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQG 76

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           ++             ++   ++   + +  L                          +  
Sbjct: 77  FDTL-------WLPGMDHAGIATQAKVEAKL-------------------------AEDG 104

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK++  V D+  +    +IR+    + I  D          G    +R +  
Sbjct: 105 ISRYDLGREKFIDTVWDWK-EEYASVIREQWAKVGISVDYSRERFTLDDGLSEAVRKVFV 163

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            +  +  +Y G          +    D
Sbjct: 164 TMYNKKLIYRGEYIINWDPKAKTALSD 190



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+++ G+D++R+ +       + + F + K+       
Sbjct: 516 LIRDTDGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDA----- 570

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  A+     I       F  ++ + F  + I    E   ++  ++  L      +
Sbjct: 571 -------AWNFINKI--WNASRFTLMNMENFTVDQIDLTGEKTVADRWILTKL---NETV 618

Query: 510 ENATIAQE 517
           E  T   E
Sbjct: 619 EKVTDLFE 626


>gi|317507069|ref|ZP_07964832.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254644|gb|EFV13951.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 886

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 59/219 (26%), Gaps = 45/219 (20%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS     +         +  +   +  K +I     N TG +HVGH     V D +    
Sbjct: 17  PSAHEDEIYRRWQDSGLFTADPASEKPKFSIVVPPPNVTGNLHVGHAMEHAVMDAICRRK 76

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYEV                                      Y PG     +  + A
Sbjct: 77  RMQGYEVL-------------------------------------YLPGFDHASIATQAA 99

Query: 215 -----DKYSSELLNFPEEKWLPIVKDYSVQAMMKI-IRDDLKALNIQHDIFISEDDFHRG 268
                 +  +       E +L   + ++ +  ++  I   ++ L    D          G
Sbjct: 100 IDKQLAEEGTSRHELGREAFLE--RAFAWKEQVRGNISGQMRRLGDSVDWSRERFTMDEG 157

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               +R +   L   G +Y+       S   +    D +
Sbjct: 158 MVKAVRTVFKQLFDAGLIYQAERLVNWSPKQRTVISDAE 196



 Score = 38.4 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           L RD    KMSK  G+ I     +D  G+D+ RF +L 
Sbjct: 533 LVRDEKGQKMSKSKGNVINPLDWLDRFGADATRFALLR 570


>gi|269986151|gb|EEZ92464.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 483

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/413 (13%), Positives = 133/413 (32%), Gaps = 68/413 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D  A           + +++         +         +   N  +  
Sbjct: 18  HIGHAYTTIIADVFARWHRL---NNEKVFFLTGTDEHGGKI---------EKAANEKNKT 65

Query: 197 PEGYYPGVYLKHV-GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDLKALN 253
           P+        K+    E  +    + +   ++     VK +  +   K  I + + +   
Sbjct: 66  PKELVDETSQKYKTTWEKLNISYDKFIRTTDKSHEETVKRFIKKVFEKGDIYKGEYEGFY 125

Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMDRK 307
              D  +I+E +   G        +  +  + Y      Y+  +    +K     + +  
Sbjct: 126 CLPDERYITESELVGGKCPDCGRDVQKIKEEAYFFKLSKYKDQIINLINKGLILPEKNAN 185

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM----------- 356
           ++L R      D+D             +     +  K+     + +YV            
Sbjct: 186 EILNRLKGELKDLD------------ISRKSVSWGIKFPLDESHSVYVWFDALLNYLSAL 233

Query: 357 -GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--------------MPIKMS 401
              D S + +   A    V ++    + ++   + +  D                  KMS
Sbjct: 234 NWPDGSEFKEFWPADIHLVGKEIVWFHSVIWPAMLMSADLPLPKNILAHGWWTVDGKKMS 293

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           K  G+ +    + D+  +D+ R+ +L  K + E  DF    +KE+     +  +    AR
Sbjct: 294 KSIGNVVDPIEIADKYSADAFRYFLLREKPTWEDGDFSEAALKERINGELMSNLSNLVAR 353

Query: 461 CRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDT-SELQL----IVHLAEY 505
             ++  + +   +  P+++  +    +I    + D  S L L    I  + +Y
Sbjct: 354 VLTLAEKFEGKIEGKPEIEDFIRKEEIIENFEKKDLYSALNLIFEGIRKINKY 406


>gi|242080701|ref|XP_002445119.1| hypothetical protein SORBIDRAFT_07g004420 [Sorghum bicolor]
 gi|241941469|gb|EES14614.1| hypothetical protein SORBIDRAFT_07g004420 [Sorghum bicolor]
          Length = 1056

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 57/212 (26%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS + +   +   S   +G +         I     N TG +H+GH     + D +   
Sbjct: 103 SPSAVERSWYAWWESSGYFGADPASTKPPFVIVLPPPNVTGALHIGHALTVAIEDAMIRW 162

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R ++   ++                   + 
Sbjct: 163 RRMSGYNALWVPGVDHAGIATQVVVEKKLMRERKLTRHDIG--------RENFISEVLKW 214

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y   +LN                         L+ L    D               +
Sbjct: 215 KDQYGGTILNQ------------------------LRRLGASLDWSREAFTMDEQRSKAV 250

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    L ++G +Y          T +    D
Sbjct: 251 TEAFVRLHKEGLIYRDYRLVNWDCTLRTAISD 282


>gi|227509271|ref|ZP_03939320.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191269|gb|EEI71336.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 675

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 106/341 (31%), Gaps = 62/341 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      GY+V      ++ G +I         +    L  
Sbjct: 17  PSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIE--------QKADKLGM 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                 +    G+       E+++ K+     ++ E     I +   +Q    I   +  
Sbjct: 69  TPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHERAVADIFQQ--LQDQGDIYLGEYT 126

Query: 251 ALN-IQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
               +  + + +E      +R D   +          G    G       + +    M +
Sbjct: 127 GWYSVSDEEYFTESQLAEVYRDDDGKVIG--------GKAPSGHEVQLVHEQSYFFKMSK 178

Query: 307 KQLLFRSTMVG-DDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMIYV 355
                R       D  +P  + +     F      DLA  +  +  G        +++YV
Sbjct: 179 YADWLRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYV 238

Query: 356 M--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------- 394
                          G D S + K   A    V ++  + + +   ++            
Sbjct: 239 WIDALSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTV 298

Query: 395 -------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                      KMSK  G+ I    ++D  G D++R+ +L 
Sbjct: 299 YGHGWLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLR 339


>gi|330836357|ref|YP_004410998.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748260|gb|AEC01616.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 884

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 35/197 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I  +    G+   +++   G    I     N TG +H+GH     + DT+    
Sbjct: 13  KDFEDRIYEAWRRDGLFKPQDVP--GKPFTIVMPPPNVTGILHMGHALNNSLPDTIIRYQ 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +G                           ++ L+   +D        V  + + +E  
Sbjct: 71  RMAG---------------------------RKTLWVPGTDHAGIATQNVVERQLAREGL 103

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++      F E  W    K +SV      I   L+ +    D          G    +R
Sbjct: 104 SRHDLGREKFLERTWQVKKKHHSV------IVKQLEKIGCSCDWEHERFTMDEGLSRAVR 157

Query: 275 DIIDNLARQGYVYEGIL 291
           +    L  +G +Y+G  
Sbjct: 158 EAFVTLYERGLIYKGKY 174


>gi|256826934|ref|YP_003150893.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583077|gb|ACU94211.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 526

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 98/343 (28%), Gaps = 64/343 (18%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +  D L+      GY+V    ++         +A +   +  
Sbjct: 14  YVNAAP----HLGTAYTTIGADVLSRYKRMDGYDVA---FVGGMDEHGQKVADTAAKKGM 66

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--I 244
                 DS  P               L D   ++++   EE+    V+ +      K  +
Sbjct: 67  TPQAWCDSMEPAFL--------DAWNLLDITYTDIVRTTEERQTRTVQRFWGDLYEKGWL 118

Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDPS----------------------PIRDIIDNLA 281
            +D       +  + + +E D  + +                         + +  D L 
Sbjct: 119 YKDSYDGWYCVHEETYYAESDLEKDEDGTFVCPECHRPVQKASGEENWFFKLSEFQDRLL 178

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--LA 339
                +   + P   +      +         +    D   PL    G   Y  AD  LA
Sbjct: 179 AFYDEHPDFIQPLTRRNEIVSFVKGGLKDLSISRSTFDWGIPLPFDTGHVAYVWADALLA 238

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG---- 395
           Y        F  + Y   +    +  R       V +   + + ++   + +        
Sbjct: 239 Y--------FTGIGYADEARAGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITH 290

Query: 396 ----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                        KMSK  G+ +    +V   G D+ R+  + 
Sbjct: 291 KVFGHGFLLTKGEKMSKSKGNGVMPADLVRIFGVDAYRYYFMS 333


>gi|307719496|ref|YP_003875028.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533221|gb|ADN02755.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 882

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 70/213 (32%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I ++ +  G    R  +GK   + I     N TG +H+GH     + D L    
Sbjct: 15  KEFEERIYATWLEQGAFMPREGVGKPFVIVI--PPPNVTGVLHMGHGLNNSLQDILIRYH 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + AG    ++     W                   GV  + +G+   
Sbjct: 73  RMKGEPTLWLPGTDHAGIATQSVVERKLWA-----------------QGVDPRSLGR--- 112

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK++ I   ++++   +II + LK +    D          G    +R
Sbjct: 113 ------------EKFVEITWQHALEH-KEIIINQLKKIGASCDWSRERFTLDEGLSRAVR 159

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++  +L  +G +Y G      S   +    D +
Sbjct: 160 EVFVSLYEKGLIYRGTYLVNWSPGLKTALADDE 192



 Score = 38.0 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 34/194 (17%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ I    +V+E G+D++RF  L    ++  D    K   Q     
Sbjct: 520 LVRDKQGRKMSKSLGNGIDPLEIVEEYGADALRFT-LAFLAAQGQDVLLDKETFQVG--- 575

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEYPRVI 509
                 A+        +  +    +  +L  R +IP +E E    +  ++  L +  R +
Sbjct: 576 ------AH-----FANKIWNASRFILMNLEGRTLIPFEEIETTDVDRWILHRLNQTIRTV 624

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMR---LQLV 563
            +A       + A   Y+    F   WS           R +  ++ +    R   L L 
Sbjct: 625 RDALETYRFNEAAQTAYE----F--FWSDFCDWYIESAKRSLNGDDEREKD-RVVSLLLF 677

Query: 564 HAVASIINSGLNII 577
                ++   L ++
Sbjct: 678 -----VLEQALKLL 686


>gi|227552721|ref|ZP_03982770.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897353|ref|ZP_05677006.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|227178121|gb|EEI59093.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833918|gb|EEV60339.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGIAAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|254447166|ref|ZP_05060633.1| valyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263305|gb|EDY87583.1| valyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 968

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 66/245 (26%), Gaps = 43/245 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + K           +  +    G    I     N TG +H+GH     + D L 
Sbjct: 26  TYAPDAIEKRWYEQWEQSGYFHTDADAAGDPYCIMLPPPNVTGTLHMGHAFQQTIMDALT 85

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+    +   + AG     +                               V +
Sbjct: 86  RYYRMKGHNTLWQPGTDHAGIATQMV-------------------------------VER 114

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +      +     +L  V ++  Q+   I R  ++ +    D          G   
Sbjct: 115 QLAAE-GQNRHDLGRAPFLEKVWEWKEQSGGTITRQ-MRRMGTSPDWQRERFTMDDGLSK 172

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK----S 327
            + D    L ++G +Y G               D +          D+  +        +
Sbjct: 173 AVSDTFVRLYKEGLLYRGKRLVNWDPKLHTAISDLE------VENKDEKGKLWQFRYPLA 226

Query: 328 DGSYT 332
           DG+ T
Sbjct: 227 DGATT 231


>gi|169830260|ref|YP_001716242.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637104|gb|ACA58610.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 516

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 111/335 (33%), Gaps = 59/335 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DT+A     +GY+V      ++ G +I         R   A   
Sbjct: 17  PSDNLHIGHAYTTVAADTVARFKRLTGYDVYFLTGSDEHGQKIE--------RTAAARGK 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--YSVQAMMKIIRDDL 249
           N  +  +    G        E+     S+ +   E++   +V D    +     I +   
Sbjct: 69  NPQEYVDEIVAGFKRLWSRLEI---DYSDFIRTTEDRHKRVVTDIFRRLHEQGDIYKSSY 125

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           + L     + F ++     G+       ++ +A + Y +       +       + D  Q
Sbjct: 126 EGLYCTPCEAFWTDRQVVEGNCPDCGRPVELVAEESYFFRQSRYAERLLAHIDRNPDFIQ 185

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM------ 356
            + R   V   +   L            DL   +  +  G    FD  ++IYV       
Sbjct: 186 PVSRRNEVVSFIKMGL-----------EDLCVSRTTFNWGIPVPFDPRHVIYVWVDALTN 234

Query: 357 -------GS-DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                  G+ D S Y +        V +   + + ++  ++ +                 
Sbjct: 235 YISALNYGAEDDSLYRRYWPVDVHLVGKDIVRFHCIIWPIILMAAGIPLPKRVVGHGWLM 294

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 295 LESGKMSKSKGNVVDPFVLIDRYGVDAIRYYLLRE 329


>gi|167755124|ref|ZP_02427251.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402]
 gi|237733450|ref|ZP_04563931.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167705174|gb|EDS19753.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402]
 gi|229383485|gb|EEO33576.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 643

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 108/378 (28%), Gaps = 67/378 (17%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            +N         I + S  P    H+G+    ++ D +A      GY V  +   ++ G 
Sbjct: 1   MKNEKDYYLTTAITYTSGKP----HIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQ 56

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           +I   A       +Q +     ++         +  +     D++     ++ + +   I
Sbjct: 57  KIELKAKEAGIPPKQFVDEKAGEVK-------RIWDLMDTTYDRFMRTTDDYHKSQVQKI 109

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD----PSPIRDI------------ 276
            K    Q  + +   +        + F +E     G        + D             
Sbjct: 110 FKKLYDQGDIYLGHYE-GKYCTACESFFTESQLVDGKCPDCGGEVHDAKEEAYFFKLSKY 168

Query: 277 IDNLARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            D L      +   + P   K            Q   + R    +   +  D      + 
Sbjct: 169 ADRLIEHIETHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVW 228

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D    Y              G+D    V G+    Y K   A    + +   + + +  
Sbjct: 229 IDALSNYITG----------LGYD----VDGNHGELYQKYWPADLHLIGKDIVRFHTIYW 274

Query: 387 ELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN- 431
            ++ +  D                  KMSK  G+ I    +VD  G D+VR+ +L     
Sbjct: 275 PIMLMALDIPLPKQVFGHPWLLQGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPY 334

Query: 432 SELLDFDFCKVKEQSKEN 449
                  +  + E+   +
Sbjct: 335 DNDGSITWDLLVERINSD 352


>gi|319399647|gb|EFV87901.1| methionyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 656

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMISGIKNLWSKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNINKY---TDRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|312901251|ref|ZP_07760534.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291628|gb|EFQ70184.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 478

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 127/426 (29%), Gaps = 50/426 (11%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           + + ++        E       +  KV +          +H+G+ R A+  DT+     +
Sbjct: 5   WKKDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEY 64

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GYEV       D   +I   A  +     +          E        + +  + A  
Sbjct: 65  RGYEVNYVSNFTDVDDKIIKAAKELKITAPEVAERFIKAFEEDA------QALNVQPATL 118

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           +   + + P+           + A ++++ +   A  +  D++     F           
Sbjct: 119 HPRVMDHMPD-----------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQS 166

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID L        G       +   K D     L   +       D P  K    +    +
Sbjct: 167 IDELE------VGASQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECS 220

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A       +     I + G          E  +A + ++              +    
Sbjct: 221 VMAT------KHLGETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGE 274

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+FIT+  ++ +V    +RF M   +    + +    +KE +      Y +
Sbjct: 275 DDEKMSKSLGNFITVHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQK 330

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVH 501
              A     FRQA D    L  D      + +  +   +E+              +L   
Sbjct: 331 LKNAFENLRFRQA-DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKM 389

Query: 502 LAEYPR 507
           + +Y  
Sbjct: 390 MNQYSE 395


>gi|294785984|ref|ZP_06751271.1| glutamate--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486321|gb|EFG33684.1| glutamate--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 513

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 46/297 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
                K     V+ +PTG  HVG    A+          GD +  +      +  R  Y 
Sbjct: 5   CDNCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNGGDFILRI-----EDTDRNRYT 59

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             AG++   +  ++ W         D     G   G Y +    +L  KY+ EL+     
Sbjct: 60  --AGSE-QMIFDALKWLDLNYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG- 111

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +        ++ + +  +     L   +D         + +       I+   + G  Y
Sbjct: 112 AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPY 160

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  
Sbjct: 161 VIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLM 214

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 215 GITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 264


>gi|281337499|gb|EFB13083.1| hypothetical protein PANDA_018953 [Ailuropoda melanoleuca]
          Length = 1060

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 53/198 (26%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           +     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYSWWVREGFFKPEYQTKLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 168 RWHRMCG---------------------------DQVLWVPGSDHAGIATQAVVEK---- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E++L  V  +  +     I + L+AL    D          G  +
Sbjct: 197 QLWKERGVRRHELSREEFLREVWKWKEEKG-GEISEQLQALGASLDWDRECFTMDAGSSA 255

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L   G +Y  
Sbjct: 256 AVTEAFVRLYEAGLLYRS 273


>gi|126728611|ref|ZP_01744426.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
 gi|126710541|gb|EBA09592.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
          Length = 511

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 126/379 (33%), Gaps = 50/379 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +V D L  L+    Y      Y+ +     + +  +   R +        DL
Sbjct: 46  HLGNARPVLVFDVLYRLLRHV-YGADHVTYVRNFTDVDDKINATALARKEAGADGTLEDL 104

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYS--VQAMMKIIRDDLKAL 252
                    ++   +E    Y  ++      E   +P   +Y   + AM++ + +   A 
Sbjct: 105 ---------IRERTEETISWYLKDMGELGALEPDRMPRATEYIAPMVAMIEGLIESGHAY 155

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
             +  +      +        R + D +A                   K D     L   
Sbjct: 156 AAEGHVLFRVRSYEAYGKLSGRSVDDMMA----------GARVEVAPYKEDPMDFVLWKP 205

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRL 367
           S+      D P  +    +    + ++Y    +   FD  I+  G+D     H   + + 
Sbjct: 206 SSDELPGWDSPWGRGRPGWHIECSAMSY--ELFGSSFD--IHGGGNDLMFPHHENEIAQS 261

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMM 426
                     +     +      L  +G   KMSK  G+F T+R ++D+ V  + +RF+M
Sbjct: 262 CCA-----HPEGDFAKVWMHNEMLQVEGR--KMSKSLGNFFTVRDLLDQGVPGEVIRFVM 314

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L     + +D+   K +E  ++  + Y        R++ ++A     D            
Sbjct: 315 LSTHYRKPMDWTAEKAREAKRK--LAYW-------RALLKEAGVEGVDSTAADLGVVSDL 365

Query: 487 QESEFDTSELQLIVHLAEY 505
            E       L  +  +A+Y
Sbjct: 366 AEDLNTKPALDKLGSIADY 384


>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|187629854|sp|A5WEW9|SYC_PSYWF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 505

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 103/323 (31%), Gaps = 45/323 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D ++  +   GYEV    Y+      I  +   +  R       N++  
Sbjct: 60  HIGHARVMVAFDVVSRWLRHLGYEV---NYV----RNITDIDDKIIARA------NENGE 106

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
           P G     ++K +  E A     E  +                   + I + L  +    
Sbjct: 107 PIGELTHRFIKAM-HEDAAALGCENPDAEPRAT-------------EHIDEMLDMIGTLE 152

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFR 312
                    +      +   +D     G + +  L   ++ +    D D+K     +L++
Sbjct: 153 QK----QHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDFVLWK 208

Query: 313 STMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           +   G+        S   G   +     A         FD    + G  H       E  
Sbjct: 209 AAKAGEP---QWASSWGGGRPGWHIECSAMSTKCLGNSFD----IHGGGHDLQFPHHENE 261

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            A  SE           +   + +    KMSK  G+F T+R V+ +   +++RF +L   
Sbjct: 262 IAQ-SEAATGCTYAHNWMHVGFINVDGEKMSKSLGNFFTIREVMQKFHPETIRFFILSSH 320

Query: 431 NSELLDFDFCKVKEQSKENPVFY 453
               ++F    +KE        Y
Sbjct: 321 YRSQVNFSDAALKEAHSGLTRIY 343


>gi|328472070|gb|EGF42947.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 942

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+        VL    V    DG   KMSK  G+ +  +
Sbjct: 563 LYLEGSDQHRGWFQSSLISSVAMKGVAPYKQVLTHGFVV---DGHGRKMSKSIGNVVAPK 619

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 620 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FF 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +L+      +++P E         +   LA    +I  A      + +  
Sbjct: 668 LANLNGFNPATDIVPAEEMVALDRWAVGRALAAQEEII-KAYDEYNIHAVTQ 718


>gi|293553639|ref|ZP_06674263.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602214|gb|EFF32442.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGITAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIKNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|258424475|ref|ZP_05687354.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845344|gb|EEV69379.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 657

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   +E+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTKERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRE 338


>gi|256027411|ref|ZP_05441245.1| glutamyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765374|ref|ZP_06524752.1| glutamyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716929|gb|EFD80941.1| glutamyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 516

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 46/297 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
                K     V+ +PTG  HVG    A+          GD +  +      +  R  Y 
Sbjct: 8   CDNCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNGGDFILRI-----EDTDRNRYT 62

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             AG++   +  ++ W         D     G   G Y +    +L  KY+ EL+     
Sbjct: 63  --AGSE-QMIFDALKWLDLNYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG- 114

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +        ++ + +  +     L   +D         + +       I+   + G  Y
Sbjct: 115 AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPY 163

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  
Sbjct: 164 VIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLM 217

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 218 GITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNNDRSKISKRK 267


>gi|19704675|ref|NP_604237.1| glutamyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714985|gb|AAL95536.1| Glutamyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 516

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/298 (19%), Positives = 100/298 (33%), Gaps = 52/298 (17%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K     V+ +PTG  HVG    A+     A              ++ND G  I  + 
Sbjct: 10  DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFA--------------HVND-GDFILRIE 54

Query: 179 LSVFWRYQQ--------ALYNNDSDLPEG----YYPGVYLKHVGKELADKYSSELLNFPE 226
            +   RY +        AL   D D  EG       G Y +    +L  KY+ EL+    
Sbjct: 55  DTDRNRYTEGSEQMIFDALKWLDLDYSEGPDVGGDYGPYRQSERFDLYGKYAKELVEKGG 114

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             +        ++ + +  +     L   +D         + +       I+   + G  
Sbjct: 115 -AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVP 162

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     + 
Sbjct: 163 YVIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHL 216

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 217 MGITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 267


>gi|30316171|sp|Q8RDZ8|SYE_FUSNN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 510

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/298 (19%), Positives = 100/298 (33%), Gaps = 52/298 (17%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K     V+ +PTG  HVG    A+     A              ++ND G  I  + 
Sbjct: 4   DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFA--------------HVND-GDFILRIE 48

Query: 179 LSVFWRYQQ--------ALYNNDSDLPEG----YYPGVYLKHVGKELADKYSSELLNFPE 226
            +   RY +        AL   D D  EG       G Y +    +L  KY+ EL+    
Sbjct: 49  DTDRNRYTEGSEQMIFDALKWLDLDYSEGPDVGGDYGPYRQSERFDLYGKYAKELVEKGG 108

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             +        ++ + +  +     L   +D         + +       I+   + G  
Sbjct: 109 -AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVP 156

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     + 
Sbjct: 157 YVIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHL 210

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 211 MGITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 261


>gi|332685570|ref|YP_004455344.1| glutamyl-tRNA synthetase, glutamyl-tRNA (Gln) synthetase
           [Melissococcus plutonius ATCC 35311]
 gi|332369579|dbj|BAK20535.1| glutamyl-tRNA synthetase, glutamyl-tRNA (Gln) synthetase
           [Melissococcus plutonius ATCC 35311]
          Length = 486

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 96/302 (31%), Gaps = 48/302 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +         +        +Q+  L  
Sbjct: 9   APSPTGHLHIGNARTALFNYLFARHNDGDFIIRIED----TDQKRNIEGGEKSQLENL-- 62

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
              W       + D+    G Y     K + + L D+  S              K Y   
Sbjct: 63  --KWLGVDWDESPDNPGAYGPYRQSERKDIYQPLIDQLLSSN---------RAYKCYCTP 111

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +K  R+  KAL         E   + G   +           +G +       P++ +
Sbjct: 112 EELKEEREGQKALG--------EMPHYAGKCANLTPSEQAENEAKGLIPVIRFRVPRNTS 163

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM + +++F S  +G D    + K DG  TY       F    +     + +V+ G
Sbjct: 164 YTFNDMVKGEIVFESDNIGGDF--VIQKQDGMPTYN------FAVAVDDHLMKITHVLRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A          +   +  +       K+SKR    +       E+
Sbjct: 216 DDHIANTPKQLMIYEAFGWTPP----IFGHMTLIINAATGKKLSKRDETILQFIEQYREL 271

Query: 418 GS 419
           G 
Sbjct: 272 GY 273


>gi|317495367|ref|ZP_07953736.1| glutamyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914426|gb|EFV35903.1| glutamyl-tRNA synthetase [Gemella moribillum M424]
          Length = 487

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 104/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +   + ++  +E               
Sbjct: 9   APSPTGNLHIGNARTALFNYLFAKHYGGDFVLRI-EDTDFKRNKE------------EGE 55

Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYS 237
               +Y   L  + D  + +    G Y +    E+  KY+ +LL   +  K     ++  
Sbjct: 56  RSQLKYMDWLGLDYDEGIGKEKEFGPYRQSERIEIYQKYAEQLLAEDKAYKCYMTAEELE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +   ++        + +H     E+              D   ++G      +  P+ +
Sbjct: 116 AEREEQVANGLPPRYSGKHAHLTKEEQ-------------DQFEKEGRKPSIRIRVPQDR 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    DM + +L F     GD     ++K+DG  TY   + A     +     +++   G
Sbjct: 163 TYSFNDMVKGELSFEGKDFGDF---VIVKNDGVATY---NFAVAIDDHLMEISHVLR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   V  A+  K      +      L  +    K+SKR    I      D++
Sbjct: 215 DDHVSNTPKQLVVYEALGFKPPIFGHM-----TLIVNENKKKLSKRDETIIQFIEQYDDL 269

Query: 418 GS 419
           G 
Sbjct: 270 GY 271


>gi|296134048|ref|YP_003641295.1| valyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032626|gb|ADG83394.1| valyl-tRNA synthetase [Thermincola potens JR]
          Length = 883

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + K           +   +  +     I     N TG +H+GH     + D L 
Sbjct: 10  TYNPGEVEKKWYKFWEDNGFFHAEVNPEKKPFAIVMPPPNVTGALHMGHAIDNTLQDILT 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                            AL+   +D           + + K
Sbjct: 70  RWRRMQGYN---------------------------ALWLPGTDHAGIATQAKVEEQLAK 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   KY      F E  W    K++        I   L++L    D          G   
Sbjct: 103 EGLSKYDLGRDKFLERVWQ--WKEFYHNR----IATQLRSLGSSCDWERERFTMDEGCSR 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++ +  +L ++G +Y  
Sbjct: 157 AVQKVFVDLYKKGLIYRD 174


>gi|295107808|emb|CBL21761.1| methionyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 652

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 110/364 (30%), Gaps = 53/364 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MDKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ + N   ++         +  +     DK+        E++   I K   
Sbjct: 61  AEEAGITPKEFVDNVSGEIK-------RIWDLMNTSYDKFIRTTDADHEKQVQKIFKK-- 111

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNL 280
           + A   I +   + +     + F +E     G                    +    D L
Sbjct: 112 MYAKGDIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPCVPAKEEAYFFKMSKYADRL 171

Query: 281 ARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                 +   + P   K            Q   + R    +   +  D      +  D  
Sbjct: 172 IDYINTHPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDAL 231

Query: 331 YTYFAADLAYFKCKYE-RGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQIN 382
             Y    + Y         F+ +    ++++G D    + R   +      +S       
Sbjct: 232 TNYITG-IGYDCDGESSEQFNKLWPADLHLIGKD----IIRFHTIYWPIFLMSLDLPLPK 286

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
            +      L  DG   KMSK  G+ I    +VD  G D+VR+ +L            +  
Sbjct: 287 QVFGHPWLLQGDG---KMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWEL 343

Query: 442 VKEQ 445
           + E+
Sbjct: 344 MVER 347


>gi|260495126|ref|ZP_05815254.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197183|gb|EEW94702.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 516

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 46/297 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
                K     V+ +PTG  HVG    A+          GD +  +      +  R  Y 
Sbjct: 8   CDNCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNGGDFILRI-----EDTDRNRYT 62

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             AG++   +  ++ W         D     G   G Y +    +L  KY+ EL+     
Sbjct: 63  --AGSE-QMIFDALKWLDLNYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG- 114

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +        ++ + +  +     L   +D         + +       I+   + G  Y
Sbjct: 115 AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPY 163

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  
Sbjct: 164 VIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLM 217

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 218 GITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNNDRSKISKRK 267


>gi|238502645|ref|XP_002382556.1| glutamyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220691366|gb|EED47714.1| glutamyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 611

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 72/397 (18%), Positives = 133/397 (33%), Gaps = 49/397 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        D    I      ++   Q A
Sbjct: 51  APSPTGYLHLGSLRTALFNYLLA---KRTGGQFLLRIEDTDQKRTIPDAEQRLYEDLQWA 107

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y +     +   ++ +L+N     +        + A  +     
Sbjct: 108 GLQWDEGPNVGGSYGPYRQSERTAIYRTHARDLINNG-HAYRCFCSADRLDAFARHRSQ- 165

Query: 249 LKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMD 305
              L   +D   +E      +   +     +  L  +GY ++E I+     +      +D
Sbjct: 166 -AGLPPGYDRKCAEVSAEESEDRAAKGEAHVVRLKVEGYPMFEDIVYGKTGQNRSPNKLD 224

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
               ++         D  L+KSDG  TY    LA     +     ++I   G++      
Sbjct: 225 LIDRVYD--------DPILIKSDGHPTYH---LANVVDDHLMKITHVIR--GTEWMPSTP 271

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF--ITLRHVVDEVGSDSVR 423
              A+  A      +        V L  D    K+SKR  D      +       +  V 
Sbjct: 272 LHVALYNAFKWTPPRFGH-----VPLLVDKSGQKLSKRNADIDLTFFKDTQGVFAATLVN 326

Query: 424 FMML--WRKNSELLDFDFCKV-----KEQSKENPV------FYVQYAYARCRSIFRQAKD 470
           F  L  W    +   F   ++      + +K N V      +++Q A+A+     R A +
Sbjct: 327 FAALLGWSHTQKSDIFSLEELEQIFNLKITKGNTVVAFEKLWFLQKAHAQ-----RFATN 381

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLI--VHLAEY 505
             P+ +  +F  +   +E+        ++    LAEY
Sbjct: 382 GGPEFEEMVFRVSRAVEETCPSQQLASILQSRSLAEY 418


>gi|188588457|ref|YP_001919550.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498738|gb|ACD51874.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 645

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 74/499 (14%), Positives = 150/499 (30%), Gaps = 141/499 (28%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D LA     +GY+V                              
Sbjct: 18  PSTKLHIGNTYTTVAADALARFKRLTGYDV--------------MFLTGT---------- 53

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK +  ++   V  ++  I+D    
Sbjct: 54  -----------------------DEHGQKIQRIAEEKGITPIE--HVDEIVAGIKDLWSM 88

Query: 252 LNIQHDIFI-SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK--------------- 295
           +N+ +D FI + DD+H      ++DI   L  QG +Y+                      
Sbjct: 89  MNVSYDKFIRTTDDYH---VKAVQDIFKKLHDQGDIYKSSYEGWYCTPCESFWTDTQLVN 145

Query: 296 ----SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----------KSDGSYTYFAA----D 337
                          +   F+ +   D + + +           + +     F      D
Sbjct: 146 GNCPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEENPNFIQPESRKNEMLNNFLRPGLQD 205

Query: 338 LAYFKCKYERG----FD--NMIYVM-----------GSDHS---GYVKRLEAVAAAVSEK 377
           L   +  ++ G    FD  +++YV            G        Y K   A    + + 
Sbjct: 206 LCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITALGYGQDNKDLYDKFWPADVHLIGKD 265

Query: 378 KAQINVLLCELVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             + + +   ++ +  D                  KMSK  G+ +    +V+E G D VR
Sbjct: 266 ILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNEFGVDPVR 325

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L       + F    +      N   +++   +   +           +    F   
Sbjct: 326 YYLLRE-----IPFGADGL-----FNNEIFIKKINSDLCNDLGNLLSRSVAMIEKYFDGE 375

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLA-FYLYDLASVFHGHWSHGRE 541
           + PQ    +  E +LI      P  ++ A      P  LA  ++++L    + +      
Sbjct: 376 IQPQAESGEFDE-ELINLALAAPNKVQEAIDELNIP--LALEHVFELIGRANKY-----I 427

Query: 542 NPRLRFVQANNRKLTMMRL 560
           +    ++ A +      RL
Sbjct: 428 DETTPWILAKDEN-KKARL 445


>gi|297582424|ref|YP_003698204.1| glutamyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140881|gb|ADH97638.1| glutamyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 484

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 91/292 (31%), Gaps = 30/292 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D    + T    +    +  
Sbjct: 10  APSPTGHLHIGGARSALFNYLFAR---NQGGKFIVRIEDTDQARNVETATEKLMESMKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  +  G     Y      +L ++Y  +LL                +A    + ++
Sbjct: 67  GIDWDESVDVGGPHAPYRSMERLDLYNRYVDQLLKEG-------------KAFHCYMTEE 113

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 +      E   + G    + D        +G         PK +     D  R 
Sbjct: 114 ELEAEREEQRKRGETPMYSGRDRHLTDEQKRAYEAEGKKPVVRFMVPKGQEIVVDDAVRG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +GD     ++++DG  TY   + A     +  G  ++I   G +H       
Sbjct: 174 KVTFDSDGIGDF---VIVRTDGIPTY---NFAVTVDDHTMGISHVIR--GEEHLSNAPLQ 225

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             +  A+  +             L  +    KMSKR    I       ++G 
Sbjct: 226 VMLYEALGFETPTFAH-----ASLILNEDRQKMSKRDESIIQFVEQYRDLGY 272


>gi|330686067|gb|EGG97689.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMIAGIKSLWDKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         +++ +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVEPIYENGKI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F    +    DR L   D +  +                    DLA  +  +  G  
Sbjct: 169 SYFFN---IKKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVS 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|322412743|gb|EFY03651.1| glutamyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 482

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 100/298 (33%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 11  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 64

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                ++    ++   +  E Y        Y K++ + LA+  + +     +E      +
Sbjct: 65  -----KWLGMDWDESPETHEQYRQSERLDLYQKYIDQLLAEGKAYKSYVTEDELAAERER 119

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     Q   +I+E +                   G +    L   
Sbjct: 120 QEAAGETPRYINEFLGMTEEQKAAYIAERE-----------------AAGIIPTVRLAVN 162

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           ++   +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 163 EAGIYKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR 217

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +          +  +       K+SKR  + +    
Sbjct: 218 --GDDHIANTPKQLMVYEALGWEAPAFGH----MTLIINSDTGKKLSKRDTNTLQFIE 269


>gi|319891492|ref|YP_004148367.1| Glutamyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161188|gb|ADV04731.1| Glutamyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 484

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVIRIED----TDSKRNLADGESSQFDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +GY  G Y +    E+      +LL   +  K     ++   
Sbjct: 64  ----KWLGLDWDESVDKDKGY--GPYRQSERGEIYQPLVEQLLAEDKAYKCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     +H     E+                   +G         P++KT
Sbjct: 118 ERQEQIARGEMPRYGGKHAHLTEEER-------------QQFEAEGRKPAIRFRVPQNKT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM +  + F S   GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YTFDDMVKGPVTFESDNFGDW---VIVKKDGVPTYN------FAVAVDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +      +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHISNTPKQLMIYETFGWEPPRFAHM-----TLIVNEQRKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|220903476|ref|YP_002478788.1| glutamyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867775|gb|ACL48110.1| glutamyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 463

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 99/285 (34%), Gaps = 43/285 (15%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               +   + +PTG +H+G  R A+    LA             +++       +T  L 
Sbjct: 1   MTQVVTRFAPSPTGHLHIGGARTAIFCWLLAR-------HFNGRFHL----RIEDTDLLR 49

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
               Y  ++  +   L   +   +  +    ++ + Y  +LL      W       +V+A
Sbjct: 50  SKQEYTDSILASMRWLGLDWDGELTYQTQRTDIYNAYVDKLLENGHAYWCS-CTPETVEA 108

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M +  R   K L  +++      D   G+   +R                L  P S    
Sbjct: 109 MREEARA--KGLKPRYNGCCRNRDLGPGEGHCVR----------------LKAPLSGKVV 150

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++   +  VG+  D  + ++DG  TY   ++A     ++ G  ++I   G DH
Sbjct: 151 FDDLVKGKI---AVDVGELDDMVIRRADGMPTY---NMAVVVDDHDMGITHVIR--GDDH 202

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R   +  A+     +        V +       K+SKR G
Sbjct: 203 VSNTPRQILIYEALGLSVPRFGH-----VPMILGPDRQKLSKRHG 242


>gi|293378885|ref|ZP_06625040.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292642426|gb|EFF60581.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 446

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 4   CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGIAAPE 63

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 64  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 106

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 107 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 159

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 160 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 213

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 214 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVDPQVLRFFM 273

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 274 ATTQYRRPIRYSETTMKEA 292


>gi|256752499|ref|ZP_05493356.1| glutamyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748634|gb|EEU61681.1| glutamyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 485

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 41/286 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTG +H+G+ R A+     +       ++     ++ R         +   L    +
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSS------KEFEELIFKEL 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P G Y       +  + A K   E   +   +     ++      
Sbjct: 63  EWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAY---RCYCTPEELEEDRR 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + R D+   + +      E +             +   R+G         P  +  + 
Sbjct: 120 KAVERGDIPRYSGRCRYLTKEQE-------------EAFIREGRKPVIRFIIPDDEVIEF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH 
Sbjct: 167 EDMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +   +  A+  +  +          L       K+SKR G+ 
Sbjct: 220 YNTPKQILIYKALGFEIPKFAH-----APLILGPDRTKLSKRHGNT 260


>gi|212704644|ref|ZP_03312772.1| hypothetical protein DESPIG_02707 [Desulfovibrio piger ATCC 29098]
 gi|212671928|gb|EEB32411.1| hypothetical protein DESPIG_02707 [Desulfovibrio piger ATCC 29098]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 93/283 (32%), Gaps = 43/283 (15%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+    LA            E+++       +T  L   
Sbjct: 8   KVVTRFAPSPTGHLHIGGARTAIFCWLLAR-------HFGGEFHL----RIEDTDLLRSK 56

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
             Y  ++  +   L   +   +  +    EL + Y  +LL      W        V+AM 
Sbjct: 57  QEYTDSILASMRWLGLDWDGPLNYQTQRTELYNSYVDKLLETGHAYWCS-CTPEEVEAMR 115

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R   + L  +++    E +   G                   EG     K+    K 
Sbjct: 116 EKARA--QGLKPRYNGCCRERNLGPG-------------------EGRCVRLKAPQAGKV 154

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D       +  V +  D  + ++DG  TY   ++A     YE G  ++I   G DH  
Sbjct: 155 VFDDMVKGRIAVDVSELDDMVIRRADGMPTY---NMAVVVDDYEMGITHVIR--GDDHVS 209

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              R   +  A+              V +       K+SKR G
Sbjct: 210 NTPRQILIYEALGLPVPTFGH-----VPMILGPDRQKLSKRHG 247


>gi|167753404|ref|ZP_02425531.1| hypothetical protein ALIPUT_01678 [Alistipes putredinis DSM 17216]
 gi|167658029|gb|EDS02159.1| hypothetical protein ALIPUT_01678 [Alistipes putredinis DSM 17216]
          Length = 510

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 100/283 (35%), Gaps = 27/283 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G  + R   I D  +Q             ++
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAR--RHGGTMILR---IEDTDSQ--RFVPGAEEYILES 62

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     ++ E    G     Y +   +++  KY+ +L+   E  W     D + +  +  
Sbjct: 63  LKWCGIEIDEGVGVGGPHAPYRQSERRDIYLKYAKQLV---ESGWAYYAFDTAEE--LDA 117

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +R + +A         S  +      S  ++ +     +G  +      P+++  +  D+
Sbjct: 118 LRKEYEARGETFAYNYSIREKLPTSLSLSKEEVAARIARGDQWVIRFKMPENEIVEMDDL 177

Query: 305 DRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            R  +   ++ +    D+ L KS D   TY    LA           ++I   G +    
Sbjct: 178 IRGHVEVNTSTLD---DKVLYKSADALPTYH---LANIVDDRLMEVSHVIR--GEEWLPS 229

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +     +  A       +      L  L +     K+SKR GD
Sbjct: 230 LPLHYLLYRAFG--WTDLQPRFAHLPLLLKPTGGGKLSKRDGD 270


>gi|290969030|ref|ZP_06560565.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780986|gb|EFD93579.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 886

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +             + +    +    +I     N TG +H+GH     + D L   
Sbjct: 12  APQEMEMKWYEYWEKNGYFHQEPENEKEAFSIVMPPPNVTGQLHMGHALDNTLQDILIRF 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY        + AG       ++   + +Q L                        
Sbjct: 72  KRMQGYHTAWIPGTDHAG-------IATQVKVEQQL------------------------ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   E +L  V  +  Q   + I   ++ L    D             + +
Sbjct: 101 -AKEGKTRYDIGREAFLERVWAWKQQYGDR-IEQQIRRLGSSCDWRRKRFTMDETCAAAV 158

Query: 274 RDIIDNLARQGYVYEG 289
           R++  +L  +G +Y+G
Sbjct: 159 REVFVSLYEKGLIYQG 174



 Score = 38.0 bits (87), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 62/170 (36%), Gaps = 27/170 (15%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   +        +      + +   + +V +  LV   RD +  KMSK  G+
Sbjct: 487 TGYD-IIFFWVAR------MMFMTCEFMKDIPFK-HVFIHGLV---RDSLGRKMSKSLGN 535

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    V +E G+D++RF ++        D  F   + ++  N    +            
Sbjct: 536 GIDPLGVCEEYGADALRFTLVTGNTPGN-DMRFYMERVEANRNFANKI------------ 582

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                F  ++   +    +P+ ++   ++  ++  L      ++  T   
Sbjct: 583 WNASKFVIMNLTEYDDAFVPEAADLTLADRWILTML---NETVQKVTRDL 629


>gi|257081173|ref|ZP_05575534.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257086267|ref|ZP_05580628.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256989203|gb|EEU76505.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256994297|gb|EEU81599.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 669

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 124/349 (35%), Gaps = 78/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A      G++V     +++ G +I   A  +          
Sbjct: 16  PSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEKKAAEL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +  + L+   +K++    DY + A+ +I       
Sbjct: 66  -------NVTPKEYVDKMAADVQKLW--KTLDISYDKFIRTTDDYHMAAVQQI----FDR 112

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDM-DRK 307
           L  Q DI++ E   + G  S   +      +   VY   EG +   K+ +  + ++   +
Sbjct: 113 LVEQGDIYLGE---YEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEE 169

Query: 308 QLLFRSTMVGD----------DVDRPLLKSDGSYTYF----AADLAYFKCKYERGF---- 349
              FR +   D          +  +P  + +     F      DLA  +  +  G     
Sbjct: 170 SYFFRMSKYADRLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKN 229

Query: 350 --DNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV              GS+     ++   A    V ++  + + +   ++ +  
Sbjct: 230 DPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMAL 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ +L 
Sbjct: 290 DLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLR 338


>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|61216117|sp|Q5L429|SYC_GEOKA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 466

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 114/350 (32%), Gaps = 42/350 (12%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L + +    E    L     K+ +          +H+G+ R A+V DT+   + F GY+V
Sbjct: 6   LYNTLTRKKEPFEPLEPNKVKMYV--CGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYDV 63

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
           T   Y+++     + L  +   R         ++     Y    ++ +G + AD +    
Sbjct: 64  T---YVSNFTDVDDKLIKAA--RELGESVPAIAERFIEAYF-EDIQALGCKKADIHPRVT 117

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            N           D  ++ +  +I     A  +  D++     F           ID L 
Sbjct: 118 ENI----------DTIIEFIQALIDKGY-AYEVDGDVYYRTRKFREYG-KLSHQSIDELQ 165

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                  G       K     D     L   +       D P  K    +    + +A  
Sbjct: 166 A------GARIEIGEKKDDPLDF---ALWKAAKEGEICWDSPWGKGRPGWHIECSAMA-- 214

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             KY     + I +            E   A + A++ K      L    + +  +    
Sbjct: 215 -RKY---LGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNE---- 266

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           KMSK  G+F+ +  ++ E+    +RF ML       +++    ++   + 
Sbjct: 267 KMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHPINYSEELLESARRG 316


>gi|20807263|ref|NP_622434.1| valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81482270|sp|Q8RBN5|SYV_THETN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|20515771|gb|AAM24038.1| Valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 879

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 75/270 (27%), Gaps = 41/270 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      + S  +    +   +  +     I     N TG +H+GH     + D L 
Sbjct: 7   TYNPKEFEDRIYSFWMEKGFFTPEIDPEKKPFTIVIPPPNVTGELHMGHALDNTLQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +    +        +      +L     
Sbjct: 67  RWRRMQGYAAL-------WIPGTDHASIATEIKVLDKIREETGKTKKDLTREEFL-EKAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  DKY + +L+                         LK L    D   +          
Sbjct: 119 EWKDKYENRILSQ------------------------LKKLGSSCDWTRTAFTMDEKRSK 154

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +R++  +L  +G +Y+G              S    +    +  L +    V  + D  
Sbjct: 155 AVREVFVSLYEKGLIYKGNRIINWCPSCNTALSDAEVEHKEHKGHLWYIKYPVKGEEDYV 214

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           ++ +         D+A      +  + ++I
Sbjct: 215 VIATT-RPETMLGDVAVAVHPEDERYRHLI 243



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 89/250 (35%), Gaps = 44/250 (17%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      + E   +  ++      L 
Sbjct: 470 TEDLKYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFMKEIPFKYVLIHG----LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPV 451
           RD +  KMSK  G+ I    V+++ G+D++RF ++        + F + KV+        
Sbjct: 519 RDALGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSWEKVE-------- 570

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                 ++R  +        +  L+ D    N+           +     L  Y  +++ 
Sbjct: 571 ------HSRNFANKLWNASRYVLLNLDENDTNLYLDNLALADKWI-----LTRYNNIVKE 619

Query: 512 ATIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            T   E ++L   A  LYD   S F   +      P L       +K+T   L       
Sbjct: 620 ITDNLEKFELGVAASKLYDFVWSEFCDWY-IELSKPVLYSDNEEAKKVTKSVL------R 672

Query: 568 SIINSGLNII 577
            ++++ L ++
Sbjct: 673 YVLDNTLRLL 682


>gi|257899915|ref|ZP_05679568.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837827|gb|EEV62901.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 470

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGITAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|213405723|ref|XP_002173633.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001680|gb|EEB07340.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 940

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 54/210 (25%), Gaps = 33/210 (15%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S    +L     +   Y            +     N TG +H+GH     + D +   M 
Sbjct: 30  SAYAYVLKQKANASSHYQEQNSLSDDDEVVLLPPPNITGKLHIGHALTIAIQDAICRYMR 89

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            SG +V     ++ AG    ++      R                  G   + + +    
Sbjct: 90  MSGKKVRFIPGMDHAGIATQSVIEQNLER-----------------IGSRPRELSRSSLL 132

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y+                          I++ L+++    D               + D
Sbjct: 133 EYAKTWEAG----------------YRAKIKEQLQSMAAIFDWSQMYYTLDEIRSEAVVD 176

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L  QG +Y        S   Q    D
Sbjct: 177 AFVRLHEQGLIYRKSRFVNWSCKLQSVISD 206


>gi|116671079|ref|YP_832012.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611188|gb|ABK03912.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 519

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 100/326 (30%), Gaps = 36/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
           P G  H+GH    +  D +A      GY+V      ++ G +I   A         +  R
Sbjct: 18  PNGVPHIGHAYEYIATDAMARFKRLDGYDVFFLTGTDEHGMKIAQTADKEGITPKELVDR 77

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------EKWLPIVKD 235
             +      + L   Y    +++   ++      +                E W  +  +
Sbjct: 78  NAEIYKAAHAALGISYDR--FIRTTDEDHYAASQAIWKKMEANGDIYLSKYEGWYSVRDE 135

Query: 236 YSVQAMMKIIRDDLKALNIQHDI---FISEDDFHRGDPSPIRDIIDNLARQGYV-----Y 287
                   ++++D    + + D    + +E+ +     +    ++               
Sbjct: 136 AYYVEDETVVKEDGLRYSRETDTELTWTAEESYFFRLSAYQDKLLALYEAHPEFGAPQSR 195

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              +     +  +   + R    +   + G+D     +  D    Y       +      
Sbjct: 196 FNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTG--VGYPDTESD 253

Query: 348 GFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            F       ++V+G D    + R  A+        A + +    ++  + +   +KMSK 
Sbjct: 254 SFKKYWPADVHVIGKD----ISRFHAIYWPAFLMSAGLELPKRIMIHGFLNNNGVKMSKS 309

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ +     V + G D VRF  L  
Sbjct: 310 LGNVVAPSDFVAQYGLDQVRFFFLRE 335


>gi|296328110|ref|ZP_06870643.1| glutamate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154781|gb|EFG95565.1| glutamate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 516

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/298 (19%), Positives = 100/298 (33%), Gaps = 52/298 (17%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K     V+ +PTG  HVG    A+     A              ++ND G  I  + 
Sbjct: 10  DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFA--------------HVND-GDFILRIE 54

Query: 179 LSVFWRYQQ--------ALYNNDSDLPEG----YYPGVYLKHVGKELADKYSSELLNFPE 226
            +   RY +        AL   D D  EG       G Y +    +L  KY+ EL+    
Sbjct: 55  DTDRNRYTEGSEQMIFDALKWLDLDYSEGPDVGGDYGPYRQSERFDLYGKYAKELVEKGG 114

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             +        ++ + +  +     L   +D         + +       I+   + G  
Sbjct: 115 -AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVP 162

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     + 
Sbjct: 163 YVIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHL 216

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 217 MGITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 267


>gi|260889759|ref|ZP_05901022.1| glutamate--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860365|gb|EEX74865.1| glutamate--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 504

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 129/391 (32%), Gaps = 46/391 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG  HVG    A +G    +    +G +        D           +F   + 
Sbjct: 13  IAPSPTGDPHVG---TAYIGLFNYAFAKHNGGDFILRIEDTDRTRFSGDSEQQIFDAMKW 69

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              N D     G   G Y +     +   Y+ +L+   E  +        +Q + +    
Sbjct: 70  LGLNYDEGPDVGGEAGPYRQSERFSIYKDYAEQLVEKGE-AYYCFCTAERLQKLRERQVA 128

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +A                   +  ++ ++     G  Y   L  P    T   D  R 
Sbjct: 129 MKQAPGYDGHC-----------RNLSKEEVEAKLAAGEPYVIRLKMPYEGETVVNDGLRG 177

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F ++ +    D+ LLKSDG  TY    LA     +  G  ++I     +      + 
Sbjct: 178 EIRFENSKID---DQVLLKSDGFPTYH---LANIVDDHLMGITHVIR--AEEWISSTPKH 229

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVRFM 425
             +  A    + +        + L R+    K+SKR  + ++L +  +E  +    + F+
Sbjct: 230 IQLYKAFGWDEPK-----WYHMPLLRNADKTKISKRK-NPVSLNYYKEEGYLKEGLLNFL 283

Query: 426 MLW----RKNSELL-------DFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFP 473
            L      +N E+        +F F K+   S   PVF  V+  +     +  +  D   
Sbjct: 284 ALMGWSFGENKEIFTIDEMIQNFSFDKI---SLGGPVFDLVKLGWVNNHHMRLKDLDELT 340

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            L    F +    +       E   +  + E
Sbjct: 341 KLAIPYFVQAGYYENENLSDEEFSKLKRIVE 371


>gi|300023414|ref|YP_003756025.1| glutamyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525235|gb|ADJ23704.1| glutamyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 514

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 133/433 (30%), Gaps = 95/433 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       L+     +  R                ++ 
Sbjct: 15  APSPTGYLHIGGARTALFNWLYARGRNGKFLLRIEDTDRERNN---------EQAIAAIL 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                   + D +    +      + V  EL  + ++                Y+  A +
Sbjct: 66  DGLAWLGLSWDGEAVSQFARADRHRDVAAELLKRGAAYHC-------------YASPAEI 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R+  KA            D    D       +  L             P+   T   
Sbjct: 113 DAAREKAKAEGRPLIFLSPWRDRDPKDAPKDVKPVVRLKA-----------PREGETVVE 161

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  ++F +  +    D  +L+SDG+ TY   +LA     ++ G  ++  V G+DH  
Sbjct: 162 DHVQGHVVFPNKDLD---DLIILRSDGNPTY---NLAVVVDDHDMGITHV--VRGADHLT 213

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR----------- 411
              R   +   +     +        V L       K+SKR G                 
Sbjct: 214 NAARQTQIYQGMGWAVPEFAH-----VPLIHGADGAKLSKRHGAQGVEEFRAMGYLPEAL 268

Query: 412 ----------HVVDEV--GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                     H  DE+    + +R+  +   N      DF K+ + +      Y++   A
Sbjct: 269 RNYLVRLGWSHGDDEIISAENLLRWFDIDGINKAPARLDFKKLDDLNGH----YIR--AA 322

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
               + RQ +++ P LDF     ++         S++ L         V+        P+
Sbjct: 323 SDEDLARQVREMLPHLDFKALS-DIAIDPKAPARSDIALAR------EVLRQ-----LPH 370

Query: 520 KLAFYLYDLASVF 532
                  +LA++F
Sbjct: 371 VATG--TELANLF 381


>gi|239618082|ref|YP_002941404.1| glutamyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506913|gb|ACR80400.1| glutamyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 483

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 112/347 (32%), Gaps = 67/347 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R             L  S+ 
Sbjct: 7   APSPTGYLHVGGARTALFNYLFARHTGGTFVLRIEDTDIERS-----TKESEEKLMESLL 61

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D   P G Y       + +E  D+   E   +P          Y+    +
Sbjct: 62  WLGISWDEGPDVGGPYGPYRQSERTKIYREHCDRLIKEGKAYP---------VYAYPEEI 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I D+L A         SE+ F + D    R     L  +G     I      +     
Sbjct: 113 EKIHDELLAQGKPPH--YSEELFKQFDTPERR---KELEERGL-QPAIFFKMPRREFVFI 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ + ++ F+   +GD     +L+S+G  TY   + A           ++I   G DH  
Sbjct: 167 DIVKGKVAFKEGSIGDF---VILRSNGLPTY---NFAVVVDDMTMKITHVIR--GDDHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF--------------- 407
              R  A+  A   +      +      L  DG   K+SKR G                 
Sbjct: 219 NTLRQLAIYEAFEVEAPAFAHVS---TILGPDGK--KLSKRHGHTSIEEFREKGFLPEAF 273

Query: 408 -----------ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                         + ++DE  ++ +    L R NS    FD  K +
Sbjct: 274 VNFLVLLGWSHPDGKEIMDE--NEMIEKFSLERLNSSPAVFDVTKAR 318


>gi|157111006|ref|XP_001651352.1| glutamyl-tRNA synthetase [Aedes aegypti]
 gi|108878599|gb|EAT42824.1| glutamyl-tRNA synthetase [Aedes aegypti]
          Length = 527

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 139/400 (34%), Gaps = 65/400 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G  R A+     A      G +      I D   Q   +  +    Y+  
Sbjct: 47  APSPTGFMHLGGLRTALFNYLYA---KSRGGKFILR--IEDT-DQERLVEGATERLYEDL 100

Query: 189 LY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +     ++S   EG Y G Y++    ++   Y  E+    E+        +  +  +++
Sbjct: 101 KWAGIVPDESPWNEGPY-GPYVQSKRYDI---YKQEVKKLMEDGRAYYC--FCSERRLEL 154

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +R +   L     +   ++      P  +    + LA+            K+   Q    
Sbjct: 155 LRKEAVRLR---QVPKYDNKCRHLTPGQVA---ERLAKNDKFCIRFKLDSKADEFQDMIY 208

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGY 363
             K + F +   GD     ++KSDG  TY  A++       +  +  + +V+ G +    
Sbjct: 209 -GKIVYFLAQNEGDP---VIIKSDGFPTYHFANV------VDDHYMKITHVLRGVEWQIS 258

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------------- 408
             +   +  A   K  Q        + L  +    K+SKR GD                 
Sbjct: 259 TPKHIQMFHAFGWKPPQ-----YAHLPLVMNPNGSKLSKRQGDVQLDHYRRMGIFPQALL 313

Query: 409 ---------TLRHVVDEVG---SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
                      R +VD +G   +D ++   L + N+     +   +K+ ++E   + +++
Sbjct: 314 NFITQSGGGFDRELVDVIGPQMNDLIKHFDLKKINAHSSRLNPDLLKQCNREEIEYQLRH 373

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           +  +  ++ ++   +      D      + ++   +  E 
Sbjct: 374 SEEKANALVKEVIRMVRTEFADNVKGLDLDEKHVREVLEW 413


>gi|257469006|ref|ZP_05633100.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063253|ref|ZP_07927738.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688929|gb|EFS25764.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 933

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 104/305 (34%), Gaps = 44/305 (14%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISED 263
            V  E +D     L    + +++P      + +M++   D      +   +   +F +E 
Sbjct: 416 FVNVEGSDIRERALKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFFNEA 475

Query: 264 D----FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
                F++   + I  I+       ++          +  +K D+   +L   + ++   
Sbjct: 476 TGKEIFNKEILARIVGIVKKEGTAAWLKYTAEELIGEELMEKYDLKGLELRKETNIMDVW 535

Query: 320 VD-----RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAA 373
            D     R +L++ G   +  AD+               Y+ GSD   G+ +     +  
Sbjct: 536 FDSGVSHRAVLETRGDLLHRPADM---------------YLEGSDQHRGWFQTSLLTSIG 580

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            +       +L    V    DG   KMSK  G+ +    V+   G+D +R         E
Sbjct: 581 STHDAPFKKILTHGFVN---DGEGKKMSKSVGNTVVPSDVIKLYGADILRLWCASVDYRE 637

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            +      +K+ ++         AY R R+  R       D D +    + +P E   + 
Sbjct: 638 DVKISDNILKQMAE---------AYRRVRNTARYILGNSNDFDPN---TDKVPYEQLMEI 685

Query: 494 SELQL 498
            +  L
Sbjct: 686 DKWAL 690


>gi|322418887|ref|YP_004198110.1| valyl-tRNA synthetase [Geobacter sp. M18]
 gi|320125274|gb|ADW12834.1| valyl-tRNA synthetase [Geobacter sp. M18]
          Length = 888

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 77/268 (28%), Gaps = 44/268 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +   +       +I     N TG +H+GH     + D L    
Sbjct: 12  PKSVEQKWYQEWEGKGYFHATVPSDKPSYSIVIPPPNITGVLHMGHALNNTLQDILCRWK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SGY V                           L+   +D        V  + +  E  
Sbjct: 72  RMSGYNV---------------------------LWMPGTDHAGIATQNVVERQLAAEGK 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++         E ++  V  +  ++  +II   LK L    D          G  + +R
Sbjct: 105 DRF-----ELGREGFIERVWQWKGESGGQIIGQ-LKRLGASCDWERERFTMDAGLSTAVR 158

Query: 275 DIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPLL 325
           ++   L ++  +Y                S    + +     L   R  +VG   D  L+
Sbjct: 159 EVFVRLYQEKLIYRDNRLINWCPRCHTALSDIEVEHEEKAGNLWHLRYPVVG--TDEYLV 216

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 217 VATTRPETMLGDTAVAVHPEDERYSHLI 244


>gi|222153776|ref|YP_002562953.1| glutamyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114589|emb|CAR43578.1| glutamyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 481

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 99/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYS 237
                  + L  +  + P+ +    Y +    EL  KY  ELL      + ++   +  +
Sbjct: 57  RSQLENLKWLGMDWDESPQTH--ENYRQSERLELYQKYIDELLEKGLAYKSYVTEEELAA 114

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +   +   +  + +N    +   E   +          I     +G +    L   +S 
Sbjct: 115 ERERQEAAGETPRYINEFIGMSEEEKSAY----------IAEREAKGIIPTVRLKVNESG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G
Sbjct: 165 IYKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHIIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|91789693|ref|YP_550645.1| isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698918|gb|ABE45747.1| Isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 943

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 33/183 (18%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G D   G+       A A+ +      +L         DG   KMSK  G+ +  +
Sbjct: 578 LYLEGHDQHRGWFHSSLLTACAMYDHAPYKGLLTHGF---TVDGKGRKMSKSEGNVVVPQ 634

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V D++G++ +R        S  L  D  K+  +  +        AY R R+  R     
Sbjct: 635 EVSDKLGAEIIRLWCASTDYSGDLGID-DKILARVVD--------AYRRIRNTLRFLMAN 685

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-LYDLAS 530
             D D     ++ +P +          ++ +  Y   +  A    +   LA Y +Y+   
Sbjct: 686 VSDFD---PAKDAVPFDQ---------MLEIDRY--ALSRAAQ-LQADILAHYEVYE--- 727

Query: 531 VFH 533
            FH
Sbjct: 728 -FH 729


>gi|113477100|ref|YP_723161.1| DALR anticodon binding [Trichodesmium erythraeum IMS101]
 gi|110168148|gb|ABG52688.1| DALR anticodon binding [Trichodesmium erythraeum IMS101]
          Length = 300

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 48/153 (31%), Gaps = 44/153 (28%)

Query: 444 EQSKENPVFYVQYAYARCRSIF----------------RQAKDIFPDLDFDLFP-RNVIP 486
           +  +   +F +QY++ARC S+                       +     D  P +    
Sbjct: 144 KSDETTNLFLIQYSHARCCSLLLMGERDNLITLAPTTLESYGQFWFMTTADPIPWQKSHG 203

Query: 487 QESEFDTSELQLIVHLAE----------YPRVI--ENATIAQEPYKLAFYLYDLASVFHG 534
           Q    D +E +L+  +A           + + I  E                 L++ F  
Sbjct: 204 QLQFLDYAEYELMAEIASSLDYIYCISSFKKTINWEKVAN------------SLSNRFQA 251

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567
            +   R   ++R     N KL   RL LV A  
Sbjct: 252 FYRQCRIWGKVRV---ENPKLAQARLGLVLATQ 281


>gi|323439797|gb|EGA97514.1| glutamyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443101|gb|EGB00721.1| glutamyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 484

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 103/303 (33%), Gaps = 52/303 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  ++  + D    Q + L 
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYNGDFVIRI-----EDTDKKRNLEDGETSQFDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYS 237
                ++    ++   D   GY  G Y +   + +      +LL   +  K     ++  
Sbjct: 64  -----KWLGLDWDESVDKGNGY--GPYRQSERQHIYQPLIDQLLAEDKAYKCYMTEEELE 116

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +   +I R ++     QH     E                    +G         P+++
Sbjct: 117 AEREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPSIRFRVPQNQ 163

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
           T    DM +  + F S  +GD     ++K DG  TY       F    +  +  +  V+ 
Sbjct: 164 TYSFDDMVKGNISFDSNGIGDW---VIVKKDGIPTYN------FAVAIDDHYMEISDVIR 214

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G DH     +   +  A   +  +   +      L  +    K+SKR G  +       +
Sbjct: 215 GDDHISNTPKQIMIYEAFGWEPPRFGHM-----SLIVNEERKKLSKRDGQILQFIEQYRD 269

Query: 417 VGS 419
           +G 
Sbjct: 270 LGY 272


>gi|114570478|ref|YP_757158.1| valyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114340940|gb|ABI66220.1| valyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 893

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+     +         +           +I     N TG +H+GH     + D L 
Sbjct: 8   TFNPNDAETRIYQAWEDSGAFQPKDDDNAEAFSIVIPPPNVTGRLHIGHALNNTLQDVLV 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V  +   + AG     +                               V +
Sbjct: 68  RYKRMLGCSVLWQPGTDHAGIATQMV-------------------------------VER 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA + +    +   E ++  V ++  ++   I++  L+ L    D          G   
Sbjct: 97  QLAQEGNISRADMGREAFIKRVWEWKEESGGAIMQQ-LRRLGATCDWSRERFTLDEGLSK 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +   L +QG +Y            Q    D +
Sbjct: 156 AVLKVFVELHQQGLIYRDKRLVNWDPHFQTAISDLE 191



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 17/83 (20%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
             FD +I+   +       +             K   I+        L RD    KMSK 
Sbjct: 500 TAFD-IIFFWVARMMMQGLHF------MKVAPFKDVYIH-------ALVRDENGQKMSKS 545

Query: 404 AGDFITLRHVVDEVGSDSVRFMM 426
            G+ I    ++DE G+D+VRF +
Sbjct: 546 KGNVIDPLELIDEYGADAVRFTL 568


>gi|110597795|ref|ZP_01386078.1| glutamyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340520|gb|EAT59003.1| glutamyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 506

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 107/300 (35%), Gaps = 28/300 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG +HVG  R A+     A  M   G  + R   I D   Q   +  A     R  
Sbjct: 11  APSPTGYLHVGGLRTALYNYLFAKKMD--GDFIIR---IEDT-DQTRKVEGAEKNLIRML 64

Query: 187 QALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +       + PE G   G Y++    ++   Y  +LL      +        ++   ++ 
Sbjct: 65  EWAGIIADESPERGGNFGPYVQSERLDIYKSYCDQLLE-DNHAYYCFATSEELEENRQLQ 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               + L  +++     ++   G   P  +I   L   G  Y   +  P   +    D+ 
Sbjct: 124 LK--QGLQPKYNRKWLPEEL--GGSVPASEIRKKLDA-GDPYVIRMKVPDYVSVWFEDII 178

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R  + F S  +    D+ L+KSDG  TY     A     +   F ++I   G +    + 
Sbjct: 179 RGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLMEFTHIIR--GEEWLPSMP 230

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           +   +      +  ++       + L  +    K+SKR GD     +V     SD++   
Sbjct: 231 KHLLLYEFFGWEPPKVAH-----LPLLLNPDRSKLSKRQGDVAVEDYVRKGYSSDAIINF 285


>gi|78044410|ref|YP_359197.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|90103530|sp|Q3AF87|SYV_CARHZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77996525|gb|ABB15424.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 878

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 35/193 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           RK       +G  +      +     I     N TG +H+GH     + D LA      G
Sbjct: 16  RKWYKYWEENG--FFHTEPDEREPFCIVMPPPNVTGQLHMGHALDNTMQDILARYKRMQG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +                                    LP   + G+  +   +E   K  
Sbjct: 74  FNTL--------------------------------WLPGTDHAGIATQAKVEEELRKEG 101

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK+L  V  +  +     I + L+ L    D          G    ++++  
Sbjct: 102 LTKDDLGREKFLERVWAWK-ENYGNRITEQLRTLGASCDWKRERFTLDEGCSEAVKEVFL 160

Query: 279 NLARQGYVYEGIL 291
            L  +G +Y    
Sbjct: 161 RLYEKGLIYRDYY 173


>gi|258645848|ref|ZP_05733317.1| valine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403221|gb|EEW96768.1| valine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 883

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 72/267 (26%), Gaps = 42/267 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +   +       +           +I     N TG +H+GH     + D L    
Sbjct: 12  PGAIEEKWYNFWEEHGVFHDEPEEGKEPYSIVLPPPNVTGQLHMGHALDNTLQDILIRYK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY V                           L+    D           K + +E  
Sbjct: 72  RMQGYNV---------------------------LWLPGKDHAGIATQVKVEKQIAEEGL 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            KY      F E  W    K+     + K IR     L    D               +R
Sbjct: 105 TKYDLGREKFLERVWE--WKEKYGNTIGKQIR----RLGSSCDWSRERFTMDDVCARAVR 158

Query: 275 DIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           ++  +L  +G +Y+G              S    + + D   L +    + D+ +  +  
Sbjct: 159 EVFVSLYEKGLIYQGFRITNWCPRCQTALSDIEVEHENDMGHLWYFDYPLADE-EGAVRI 217

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  + +++
Sbjct: 218 ATTRPETIPGDTAVAVNPKDERYAHLV 244



 Score = 38.4 bits (88), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 21/188 (11%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    V+++ G+D++RF ++        + F + +V    + N
Sbjct: 518 LVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGNTPGNDMRFYYERV----EGN 573

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
             F  +                F  ++ D +    IP+ES++  ++  ++  LA+    +
Sbjct: 574 RNFANKL----------WNASKFTLMNLDDYDPRFIPEESQYTLADKWILEGLAQTEEHV 623

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                  E    A  +YD A  ++       E  + R   A+N    + +  LV+    +
Sbjct: 624 SENLDKYELGAAADSIYDFA--WNSFCDWYIETAKGRLYGAHNADRQVTQYVLVY----V 677

Query: 570 INSGLNII 577
           +   + ++
Sbjct: 678 LTRIMALL 685


>gi|304316612|ref|YP_003851757.1| glutamyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778114|gb|ADL68673.1| glutamyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 480

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 94/289 (32%), Gaps = 48/289 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R       G  +  +   + 
Sbjct: 9   APSPTGNLHIGGARTALFNWLFARHNNGKMILRVDDTDLERS-----TGDSMKAIIDGLK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W            L   +  G   +    +L   Y+ +L+   +  +      +  +  +
Sbjct: 64  W------------LGIDWDEGPIYQSKRLDLYKNYADKLVKEGKAYYC-----FCTKEEL 106

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R + +              +     +   D +     +G  Y   L  PK   T   
Sbjct: 107 DEMRKEAQKAGKPPM-------YSGKCRNLPADEVKKYMDEGKKYVVRLKVPKEGKTTVH 159

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F ++   D +   ++KSD   TY   + A     Y+    ++I   G +H  
Sbjct: 160 DIIRGDVEFDNSTFDDFI---IMKSDNMPTY---NFATVIDDYDLKISHIIR--GEEHLS 211

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A+  +K          V +       K+SKR G      
Sbjct: 212 NTPKQILIYDALGFEKPSFAH-----VSMILAPDRSKLSKRHGATSVQE 255


>gi|289811661|ref|ZP_06542290.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 35

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRK 100
            + +      V IAG GFIN++L P++L +
Sbjct: 4   HLDLSGIASKVEIAGPGFINIFLEPAFLAR 33


>gi|260588948|ref|ZP_05854861.1| methionine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540727|gb|EEX21296.1| methionine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 661

 Score = 48.8 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 119/369 (32%), Gaps = 65/369 (17%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K  I    A  +G  H+G+   A++ D++A      GY+V  +   ++ G +I   A
Sbjct: 11  DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 70

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  ++ + N   ++         +  +     DK+     ++ E++   I K    
Sbjct: 71  AEAGVTCKEFVDNVAGEIKS-------IWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYD 123

Query: 239 QAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           Q    I +   + +     + F +E     G              +       + P K +
Sbjct: 124 QG--DIYKGYYEGMYCTPCESFFTESQLVDG--------------KCPDCGRPVTPAKEE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERG----F 349
                     Q L        +  +P+ + +     F      DL   +  ++ G    F
Sbjct: 168 AYFFRMSKYAQRLIDHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDF 227

Query: 350 D--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           D  +++YV                 G +   + K   A    + +   + + +   +  +
Sbjct: 228 DPKHVVYVWLDALTNYITGIGYDCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLM 287

Query: 392 YRD--------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLD 436
             D        G P       KMSK  G+ +    +VD  G D+VR+ +L          
Sbjct: 288 ALDLPLPKQIFGHPWLLQGDGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGV 347

Query: 437 FDFCKVKEQ 445
             +  + E+
Sbjct: 348 ITWELMVER 356


>gi|327438102|dbj|BAK14467.1| methionyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 653

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 102/332 (30%), Gaps = 52/332 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G  H+G     V  D +A      G++V     +++ G +I   A       Q  +  
Sbjct: 16  PSGKFHIGTAYTTVASDAIARYKRLKGFDVRFLTGMDEHGQKIQEKAQEANMHPQDYV-- 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +++ EG         +      + +        EK      D        I + + + 
Sbjct: 74  --NEIAEGAKKLWNTMDISYNDFIQTTETRHTDSVEKIFQKFLDNG-----DIYKGEYEG 126

Query: 252 LN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMD 305
           L  +  + + +E     G        +  +  + Y      Y   L        +  + +
Sbjct: 127 LYCVPCESYYTETQLVDGKCPDCGRDVQKVKEESYFFNMKKYADRLLAYYENNPEFIEPE 186

Query: 306 RKQLLFRSTMV---------------------GDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            ++    +  +                     G+      +  D    Y  + L Y    
Sbjct: 187 SRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGNPKHVIYVWVDALSNYITS-LGYGSDN 245

Query: 345 YERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
            E  F+      ++V+G D    + R   +      ++        +      + +DG  
Sbjct: 246 EEL-FNKYWPADVHVVGKD----IVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDG-- 298

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            KMSK  G+ +    +++  G D+ R+ +L  
Sbjct: 299 -KMSKSKGNVVYPEMLIERYGLDATRYFLLRE 329


>gi|325954513|ref|YP_004238173.1| glutamyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437131|gb|ADX67595.1| glutamyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 502

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 91/278 (32%), Gaps = 20/278 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G  + R     D    +      +    +  
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAK--HHQGKFILRIE-DTDQARFVEGAEEYIIESLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y++   KE+  +Y  ELL             +     +  +R  
Sbjct: 67  NLLPDEGVGFGGEYGPYIQSERKEIYTQYIHELLANG-----KAYYAFDTAEELDALRAK 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +          S  D          + +      G  Y         +     DM R +
Sbjct: 122 GEESKSPFIYNWSTRDKLNNSLGLSEEELKEKLATGEPYTVRFKIEPHENILLDDMIRGK 181

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   S+ +    D+ L KSDG  TY    LA     +     ++I   G +    +   +
Sbjct: 182 IHIASSTLD---DKVLYKSDGMPTYH---LANIVDDHLMKITHVIR--GEEWLPSMALHQ 233

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +  A   +  +   L    + L  +G   K+SKR GD
Sbjct: 234 LLYKAFGWETPRFAHL---PLILKPEGKG-KLSKRDGD 267


>gi|293572688|ref|ZP_06683656.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607274|gb|EFF36628.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 470

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGITAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|227488335|ref|ZP_03918651.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091697|gb|EEI27009.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 886

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 86/294 (29%), Gaps = 46/294 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    V    +  +        ++     N TG +H+GH     + D++       G
Sbjct: 30  EEKLYETWVKKGYFTPDAHSPKPAFSVVLPPPNVTGQLHMGHALDHTLIDSIVRRKRMQG 89

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YEV            ++   ++   + +  L   +      Y    ++     E  ++Y 
Sbjct: 90  YEVL-------WLPGMDHAGIATQTKVEAKLQEEEGKRRWDYERDEFV-DKVWEWKEEYG 141

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +L+                         ++A+    D          G    ++ I  
Sbjct: 142 GRILSQ------------------------MRAIGDSVDWTRERFTMDEGLSRAVQTIFK 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +  +G +Y        S   +           D++ + + FR   + DD    ++ +  
Sbjct: 178 QMYDEGMIYRDYRLVNWSPVLETAVSDIEVVYKDVEGELVSFRYGSMNDDEPHIVVATTR 237

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
             T    D+A          +    ++G +   +  R +     +++    +  
Sbjct: 238 MET-MLGDVAVA---VHPDDERYTDLVGQE-FPHPFRDDLTIKVIADDYVDMEF 286


>gi|154354328|gb|ABS76251.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5332]
 gi|154354330|gb|ABS76252.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5192]
 gi|154354332|gb|ABS76253.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5204]
 gi|154354334|gb|ABS76254.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5205]
 gi|154354336|gb|ABS76255.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5379]
 gi|154354338|gb|ABS76256.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5380]
 gi|154354340|gb|ABS76257.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5268]
          Length = 130

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           KVE  +  +I + + R+       T  A+ L++   +  + IAE I + +  +   V S+
Sbjct: 30  KVEFLVNKKIPLSKGRNSNQVFYITGLALQLAKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVS 108
            I   G+I+L L+   L   L  +V  
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVEK 116


>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 876

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/321 (18%), Positives = 109/321 (33%), Gaps = 55/321 (17%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           D +  +LL    + KW+P   +  +  M++  R D      +A  +   +F +E+     
Sbjct: 430 DAFREDLLQAVKDTKWVPAWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYAENGEEII 488

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               I  + +     G            + EG             + D   + F S    
Sbjct: 489 TEETIAHVSELFREHGSNIWFEKNAKELLPEGFTHEGSPNGEFTKEQDIMDVWFDSGS-- 546

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                    S  S  +   DL       +R  D  +Y+ GSD   G+         AV+ 
Sbjct: 547 ---------SHQSVLHQRDDL-------QRPAD--LYLEGSDQYRGWFNSSLTTGVAVTG 588

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    DG   KMSK  G+ +    V+ ++G+D +R  +        + 
Sbjct: 589 KAPYKGVLSHGFVN---DGEGRKMSKSIGNIVVPDKVIKQMGADILRLWVASVDYQADVR 645

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +K+ S+          Y + R+ +R       D + +   ++ I  ++  +  + 
Sbjct: 646 LSDAILKQVSE---------VYRKIRNTYRFLLGNLADFNPE---KDAISYDNLREVDQF 693

Query: 497 QLIVHLAEYPRVIENATIAQE 517
            L+  L +  + +  A    E
Sbjct: 694 MLVK-LNDLIKSVTTAYENYE 713


>gi|145589920|ref|YP_001156517.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048326|gb|ABP34953.1| Isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 953

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 14/153 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+        A +  K     +L         DG   KMSK  G+ I  +
Sbjct: 583 LYLEGSDQHRGWFHSSLLTGAMLDGKPPYKALLTHGF---TVDGQGRKMSKSVGNVIAPQ 639

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V D++G++ +R  +     S  +      +K  ++         +Y R R+  R     
Sbjct: 640 QVADKLGAEIIRLWVASTDYSGEMTISDEILKRVTE---------SYRRIRNTLRFLLAN 690

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             D D       V  Q  E D   L L   L E
Sbjct: 691 LSDFDHAKHAMPV-DQWLEIDRYALALANQLQE 722


>gi|56752435|ref|YP_173136.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81300471|ref|YP_400679.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|61216122|sp|Q5MZA4|SYC_SYNP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894954|sp|Q31MM7|SYC_SYNE7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56687394|dbj|BAD80616.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81169352|gb|ABB57692.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 478

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 107/315 (33%), Gaps = 56/315 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEV-TREYY--IND----AGAQINTLALSVFWRYQQAL 189
           H+GH R  +V DTL   + + GY V   + +  I+D       Q  T   ++  RY QA 
Sbjct: 38  HLGHARSYIVWDTLRRYLLWLGYRVRYVQNFTDIDDKILRRSRQEGTTMQAIADRYTQAY 97

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +               +  +    AD Y                    +Q ++  + D  
Sbjct: 98  F-------------EDMARLNILEADDYPRATHTLD-----------GIQRLIAELEDKG 133

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            A     D++ S   F        R  +++L               ++ + K D     L
Sbjct: 134 FAYAADGDVYFSVRRFQDYGKLSGRK-LEDLKAG-----ASGRVESAEESLKHDPFDFAL 187

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYV 364
              +       D P     G   +     A  + +     D  I+V G+D     H   +
Sbjct: 188 WKAAKPEEPAWDSPW--GPGRPGWHIECSAMVRDRLGDSID--IHVGGADLVFPHHENEI 243

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD--SV 422
            + EAV        A+   L   +V +       KMSK  G+F T+R ++DE G     +
Sbjct: 244 AQSEAVT---GHPLARYW-LHNGMVNVG----GEKMSKSLGNFTTIRQLLDEGGISPMVL 295

Query: 423 RFMMLWRKNSELLDF 437
           R  +L     + +DF
Sbjct: 296 RLFVLQANYRKPIDF 310


>gi|329118022|ref|ZP_08246735.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465910|gb|EGF12182.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 928

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 103/332 (31%), Gaps = 58/332 (17%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  L    + ++ P      +QAM++      + R       +         + H    +
Sbjct: 434 NKALQAVDDTEFFPAWGRARLQAMIEGRPDWVVSRQRFWGTPMTFFAHKETGELHPDSAA 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  I   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKIAQRIEEKGI--EAWFALDKSELLDAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A   +     +L    V 
Sbjct: 544 HYSV-----LKQREELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAPYKQLLTHGFVV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 ---DQDGRKMSKSLGNVVAPQEVYNEFGADILRLWTATTDYSGELAISKEILKRVTE--- 652

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAE---- 504
                 +Y R R+  R       D        + +PQ    E D   L +   L E    
Sbjct: 653 ------SYRRLRNTLRFLLANLSDFH---PIEDAVPQADMVEIDRYALVMARRLQEKLAG 703

Query: 505 --YP---------RVIENATIAQEPYKLAFYL 525
             YP          ++   +        AFYL
Sbjct: 704 DYYPRYAFHFAVQDIVAFCSEDLG----AFYL 731


>gi|296086256|emb|CBI31697.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 125/408 (30%), Gaps = 64/408 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D +A     SG +V      ++ G +I T A +           
Sbjct: 79  VNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIATAAAAC---------- 128

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
             S   E             +  D    + +     K   IVK++   V A   I R D 
Sbjct: 129 -GSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDIYRADY 187

Query: 250 KALN-IQHDIFISEDDFHRGDPSPI----------RDIIDNLARQGYVYEGILPPPKSKT 298
           + L  I  + +  E +    +  P+           +    L++   + E  L       
Sbjct: 188 EGLYCINCEEYKDEKELLENNCCPMHLKPCVLRKEDNYFFALSKYQKLLEETLTQNPDFV 247

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDR-------PLLKSDGSYTYFAAD--LAYFKCKYER-- 347
                ++  Q   +S +    + R       P+   +    Y   D  L Y     E   
Sbjct: 248 QPSFRLNEVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSEDNE 307

Query: 348 ----------GFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                     G+   ++++G D    H+ Y     A+  +      ++         L +
Sbjct: 308 QPDLQSAVSSGWPASLHLIGKDILRFHAVY---WPAMLLSAGLSLPKMVFGHGF---LTK 361

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---KNSELLDFD-FCKVKEQSKEN 449
           DGM  KM K  G+ +    +V   GSD+VR+  L      N      D F  +      N
Sbjct: 362 DGM--KMGKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLAN 419

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            +  +     R   + ++       +D  L       +++     E  
Sbjct: 420 TIGNLL---NRTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKA 464


>gi|226365134|ref|YP_002782917.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226243624|dbj|BAH53972.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 519

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 99/324 (30%), Gaps = 32/324 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
           P G  H+GH    +  D LA      G++V      ++ G ++   A         +  R
Sbjct: 22  PNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTAAKEGIDVRELAAR 81

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKY-SSELLNFPE------EKWLPIVKDYS 237
                   D  L   +   +       E A K     +L   +        W  +  +  
Sbjct: 82  NSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWQRMLEAGDIYLDTYSGWYSVRDEAF 141

Query: 238 VQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPSPIRDIIDNLARQGY------VYEG 289
                  +++D   L+ +    +  +E+  +    S  +D +  L  +            
Sbjct: 142 YTEAETTLQEDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLALYDENPDFIAPATRRN 201

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +        +   + R    +   + G       +  D    Y     A +       F
Sbjct: 202 EIVSFVKGGLKDLSISRTTFDWGVPVPGHPEHVMYVWVDALTNYLTG--AGYPDTDSEQF 259

Query: 350 DNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                  ++++G D    + R   V        A I +     V  +      KMSK  G
Sbjct: 260 GKFWPANLHIIGKD----ITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGEKMSKSVG 315

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +    +V++ G D+VRF +L  
Sbjct: 316 NVVDPVAMVEQYGLDAVRFFLLRE 339


>gi|254468518|ref|ZP_05081924.1| isoleucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087328|gb|EDZ64611.1| isoleucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 923

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 23/175 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     A+A+S +     +L    V    DG   KMSK  G+ I  +
Sbjct: 559 LYLEGSDQHRGWFQSSLLTASAISGQAPYKALLTHGFVV---DGQGKKMSKSKGNVIAPQ 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++D+ G+D +RF +     S  L+     +K  +           Y R R+  R     
Sbjct: 616 KIMDQYGADILRFWVAMTDFSGELNISDEIIKRSADG---------YRRLRNTLRFLCAN 666

Query: 472 FPDLDFD---LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             D D     L   N++  +         L   +A+          + + + L  
Sbjct: 667 ISDFDESSMMLEESNLLLLDKYALLKTDALQKEIAQL-------YESYDFHHLTK 714


>gi|148978532|ref|ZP_01814984.1| isoleucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962321|gb|EDK27602.1| isoleucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 946

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 107/325 (32%), Gaps = 41/325 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            +  + A   +  L +    +W+P      ++ M        I R     + I   +   
Sbjct: 430 FISMDQAGLRAKALESTKNVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 489

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H      I  +   +  +G   +       +      D D+ + +  +  V  D  
Sbjct: 490 TSELHPDSSELIEKVAKLVEEKGI--QAWWDVDAADLMGAEDADKYEKVLDTLDVWFDS- 546

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
                  G   +   D      + E   ++  +Y+ GSD   G+ +     + A+ ++  
Sbjct: 547 -------GVTHFSVVD-----SREEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAP 594

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +    
Sbjct: 595 YKQVLTHGFVV---DGNGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS- 650

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            ++ ++S +        AY R R+  R         + +    +++P E         + 
Sbjct: 651 DEILKRSAD--------AYRRIRNTARFFLANLSGFNPE---TDLVPAEEMVALDRWAVG 699

Query: 500 V-HLAEYPRVIENATIAQEPYKLAF 523
               A+    I  A      + +  
Sbjct: 700 RAQAAQ--EEIVKAYGEYNTHGVTQ 722


>gi|257888689|ref|ZP_05668342.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824743|gb|EEV51675.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 470

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 31/319 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   +I   A  +     +
Sbjct: 28  CGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYKVDFVSNFTDVDDKIIRTANELGITAPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                     E        K +  E A  +   + + P+           + A ++++ +
Sbjct: 88  VADRFIRAFEEDT------KALNVEPATLHPRVMDHMPD-----------ILAFIQVLVE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           ID L        G       +  QK D    
Sbjct: 131 KGYAYESSGDVYYRTRKFENYG-KLSDQSIDELE------VGASQRTGEEQQQKEDPLDF 183

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  K    +    + +A       +     I + G          
Sbjct: 184 ALWKQAKPGEISWDSPWGKGRPGWHIECSVMAT------KHLGETIDIHGGGQDLEFPHH 237

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A + ++   +          +       KMSK  G+FIT+  ++  V    +RF M
Sbjct: 238 ENEIAQSEAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVDPQVLRFFM 297

Query: 427 LWRKNSELLDFDFCKVKEQ 445
              +    + +    +KE 
Sbjct: 298 ATTQYRRPIRYSETTMKEA 316


>gi|255534346|ref|YP_003094717.1| isoleucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340542|gb|ACU06655.1| Isoleucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 1161

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 37/179 (20%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+  AV +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 673 GVDQTRGWFYTLHAIGTAVFDSVAYKNVMSNGLV---LDKNGQKMSKRLGNAVDPFTTLE 729

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G D+ R+ M+   N  E L FD   + E  ++          F+  YA         +
Sbjct: 730 KYGPDATRWYMIANANPWENLKFDVEGIDEVRRKFFGTLYNTYSFFALYANVDGFKYSER 789

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI---AQEPYKLAF 523
             +  P++D  +              SEL L+         +++ T      EP K+A 
Sbjct: 790 EIENRPEIDRWIL-------------SELNLL---------VKDVTEYYNDYEPTKVAR 826


>gi|269792560|ref|YP_003317464.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100195|gb|ACZ19182.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 883

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 34/191 (17%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
                + + +        K     +     N TG +H+GH     + D +       G+E
Sbjct: 19  WYGRWIGADLFKADPESPKPKFGVV-IPPPNVTGSLHMGHALNNTLQDIICRYKRMRGHE 77

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V                           L+   +D        V  +H+  +   ++   
Sbjct: 78  V---------------------------LWLPGTDHAGIATQNVVERHLASQGISRH--- 107

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
             +   E ++  V ++  Q   +II   LK L    D          G    +R +   L
Sbjct: 108 --DLGREAFVEKVWEWKEQYGSRIIGQ-LKKLGASCDWSRERFTMDEGLSRAVRKVFVEL 164

Query: 281 ARQGYVYEGIL 291
            ++  +Y G  
Sbjct: 165 YKKDLIYRGKY 175



 Score = 38.0 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 11/77 (14%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +        +      + +    +      +  L RD    KMSK  G+
Sbjct: 484 TGFD-IIFFWVAR------MIMMGLEFMGD----VPFHHVYIHALVRDERGQKMSKSKGN 532

Query: 407 FITLRHVVDEVGSDSVR 423
            I    ++++ G+D++R
Sbjct: 533 VIDPLDLIEKYGADALR 549


>gi|237743976|ref|ZP_04574457.1| glutamyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433007|gb|EEO43219.1| glutamyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 510

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 46/297 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
                K     V+ +PTG  HVG    A+          GD +  +      +  R  Y 
Sbjct: 2   CDNCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNGGDFILRI-----EDTDRNRYT 56

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             AG++   +  ++ W         D     G   G Y +    +L  KY+ EL+     
Sbjct: 57  --AGSE-QMIFDALKWLDLNYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG- 108

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +        ++ + +  +     L   +D         + +       I+   + G  Y
Sbjct: 109 AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPY 157

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  
Sbjct: 158 VIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLM 211

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 212 GITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNNDRSKISKRK 261


>gi|242023803|ref|XP_002432320.1| Valyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212517743|gb|EEB19582.1| Valyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 1027

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 65/241 (26%), Gaps = 45/241 (18%)

Query: 88  FINL----------YLSPSYLRKILSSIVVSGIE---YGRNLIGKGTKVNIEFVSANPTG 134
           F+N            L P Y  + +        E   Y +          + F   N TG
Sbjct: 30  FLNFSDHVNPPYSVTLEPKYEPEKIEKRWYDHWEKNNYFKPTKSDVESFVVLFPPPNITG 89

Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194
            +H+GH     V D +A      G  V     I+ AG                       
Sbjct: 90  TLHLGHVLTTTVQDVIARWKRMKGESVMWIPGIDHAG----------------------- 126

Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
            +        Y+K        K++       +E++L  + ++      ++I   LK +  
Sbjct: 127 -IAAQVAVEKYIK-------KKFNLNRNELGKEEFLKKMYEWKEDKE-RVICQQLKNMGA 177

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D    +          +     NL  +G +Y        S   +    D +       
Sbjct: 178 SLDWSKLKFTMDSAHSDLVTKSFINLFDKGLIYRKEALVNWSCAIKTSISDIEINWIDVE 237

Query: 315 M 315
            
Sbjct: 238 K 238


>gi|329121233|ref|ZP_08249860.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327470167|gb|EGF15630.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 906

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 61/235 (25%), Gaps = 33/235 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L         +           +I     N TG +H+GH     + D L   
Sbjct: 34  NPGEIEGKLYEFWEKNNVFHDEPDSSKEPYSIVLPPPNVTGQLHMGHALDGTLQDILIRY 93

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY V                           ++    D           K + KE 
Sbjct: 94  KRMQGYNV---------------------------MWLPGKDHAGIATQVKVEKQIAKEG 126

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             KY      F E  W    K+     + K IR     L    D               +
Sbjct: 127 LTKYDLGREKFLERVWQ--WKEKYGNTIGKQIR----KLGSSCDWTRERFTMDDVCAKAV 180

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           R++   L  +G +Y G          Q    D +            V+ P++ SD
Sbjct: 181 REVFITLYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLYYVNYPIVGSD 235



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 26/172 (15%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   +        +      + E   +   +      L RD    KMSK  G+
Sbjct: 508 TGYD-IIFFWVAR------MMFMSMEFMHEIPFKYVFIHG----LVRDSQGRKMSKSLGN 556

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    V+++ G+D++RF ++        + F + +V    + N  F  +          
Sbjct: 557 GIDPLEVIEKYGADALRFTLVTGNTPGNDMRFYYERV----EGNRNFANKL--------- 603

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
                 F  ++ D + +N IP+E ++  ++  ++  LA+    +       E
Sbjct: 604 -WNATKFTLMNLDNYDKNFIPEEKDYALADKWILEKLAKTEEFVSRNLDKYE 654


>gi|312876618|ref|ZP_07736599.1| glutamyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796571|gb|EFR12919.1| glutamyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 485

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 93/285 (32%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L       +      Y  +  +
Sbjct: 63  WLGIEW----DEGVEVGGPHGPYRSTERVDIYKKYVDVLFEKGYAYYC-----YCTEEDL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R +L +   Q   ++ +        +   +      ++G         P+       
Sbjct: 114 ESQRQELLSKG-QMPRYLGKC------RNLTEEQKRRFEQEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGDVEFMSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALGFELPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|307154328|ref|YP_003889712.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306984556|gb|ADN16437.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 480

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 116/335 (34%), Gaps = 46/335 (13%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
             IE G+  +        ++         H+GH R  VV D +   + + GY+V      
Sbjct: 17  QPIEPGKVRMYCCGITVYDYC--------HLGHARTCVVWDVVRRYLQWRGYQVKYIQNF 68

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            D    I+   L+   +   ++        + Y+  +   H+  E AD Y          
Sbjct: 69  TD----IDDKILNRAKKEGTSMEEVSERFIKAYFEDMDRLHI--EKADAYPRATHTLDG- 121

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                +K    +   K       A     D++ S   F        R  +++L       
Sbjct: 122 -----IKRLVYELEQKGY-----AYAADGDVYYSVRRFADYGKLSGRK-LEDLQAGA--- 167

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
            G +     +T +K D     L   +       + P    +G   +     A  + +   
Sbjct: 168 SGRVELEDPETQKKKDPFDFALWKAAKAGEPSWESPW--GEGRPGWHIECSAMVRERLGE 225

Query: 348 GFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             D  I+V GSD     H   + + EA   A  +  A+  +    +V++  D    KMSK
Sbjct: 226 TID--IHVGGSDLIFPHHENEIAQSEA---ATGQPLARYWM-HNGMVKVGGD----KMSK 275

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
             G+F T+R ++D+V    VR  +L       +DF
Sbjct: 276 SLGNFTTIRDLLDKVEPMVVRLFILQTHYRNPVDF 310


>gi|295397317|ref|ZP_06807409.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974391|gb|EFG50126.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 887

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + +      V+   +  N        +I     N TG +H+GH     + D      
Sbjct: 21  PNAVEEGRYDKWVASGVFAPNEDKTAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMSIRQK 80

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY+             ++   ++   + +  L             G+    +G+E  
Sbjct: 81  RMQGYDTL-------WLPGMDHAGIATQAKVEAKLAEE----------GISRYDLGRE-- 121

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K+  ++ ++ EE               + IR     + I  D          G    +R
Sbjct: 122 -KFIDQVWDWKEE-------------YAETIRQQWGKMGISVDYSRERFTLDDGLSEAVR 167

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            +  +L  +  +Y G          Q    D + +          +  PL  +DGS
Sbjct: 168 KVFVDLYNKDLIYRGEYIINWDPKAQTALSDMEVIYSDDNGAFYHISYPL--TDGS 221


>gi|227542948|ref|ZP_03972997.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181170|gb|EEI62142.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 886

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 86/294 (29%), Gaps = 46/294 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    V    +  +        ++     N TG +H+GH     + D++       G
Sbjct: 30  EEKLYETWVKKGYFTPDAHSPKPAFSVVLPPPNVTGQLHMGHALDHTLIDSIVRRKRMQG 89

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YEV            ++   ++   + +  L   +      Y    ++     E  ++Y 
Sbjct: 90  YEVL-------WLPGMDHAGIATQTKVEAKLQEEEGKRRWDYERDEFV-DKVWEWKEEYG 141

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +L+                         ++A+    D          G    ++ I  
Sbjct: 142 GRILSQ------------------------MRAIGDSVDWTRERFTMDEGLSRAVQTIFK 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +  +G +Y        S   +           D++ + + FR   + DD    ++ +  
Sbjct: 178 QMYDEGMIYRDYRLVNWSPVLETAVSDIEVVYKDVEGELVSFRYGSMNDDEPHIVVATTR 237

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
             T    D+A          +    ++G +   +  R +     +++    +  
Sbjct: 238 MET-MLGDVAVA---VHPDDERYTDLVGQE-FPHPFRDDLTIKVIADDYVDMEF 286


>gi|254513805|ref|ZP_05125866.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676048|gb|EED32413.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 684

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 106/324 (32%), Gaps = 48/324 (14%)

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-------V 320
                +R+ I +   Q  V    L        Q+ D+ R    F  T+ G+        +
Sbjct: 197 MFAGMLREWIASGTLQDAV-ANKLREWTDGELQEWDISRDAPYFGFTIPGETDKYFYVWL 255

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-VMGSD----HSGYVKRLEAVAAAVS 375
           D P+        Y       F   ++ G D  +Y  +G D    H  +     A+  + +
Sbjct: 256 DAPIGYMGSFQNYCERSGVTFDDFWQPGGDTELYHFVGKDIINFHGLF---WPAMLHSAA 312

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            +      +      L  DG   KMSK  G FI  RH +D + ++ +R+    +  + + 
Sbjct: 313 LRTPTGVFVHGF---LTVDGT--KMSKSRGTFINARHYLDHLDAEYLRYYFAAKLGAGVD 367

Query: 436 DFDFCKVKEQSKENP--VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
           D D        + N   V  V    +RC    R+  D                       
Sbjct: 368 DIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFDNQMSSSC---------------- 411

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
           SE +L+    E    I  A   +E  K    + +LA   + +    +      +V A + 
Sbjct: 412 SEPELLQSFTEAGEGIAKAYEDREFSKAVRLIMELADRANQYIDQHK-----PWVMAKDP 466

Query: 554 KLTMMRLQLVHAVASIINSGLNII 577
           +        V AV S   +   ++
Sbjct: 467 EQAAQ----VQAVCSTGINCFRML 486


>gi|77462542|ref|YP_352046.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|6686015|sp|Q9ZFA3|SYE1_RHOS4 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|4185551|gb|AAD09123.1| glutamyl t-RNA synthetase [Rhodobacter sphaeroides]
 gi|77386960|gb|ABA78145.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 471

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 97/295 (32%), Gaps = 51/295 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+                    ++   G +  T  L +
Sbjct: 7   KPVVTRFAPSPTGYLHIGGGRTALF------------------NWLYARGRK-GTFLLRI 47

Query: 182 FWRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               ++      +D            +   V  + A K     +     +     K +S 
Sbjct: 48  EDTDRERSTPEATDAILRGLTWLGLDWDGEVVSQFARKDRHAEVAREMLERGAAYKCFST 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKS 296
           Q  ++  R+  +A        +    +   DP+   D   +  +             P+S
Sbjct: 108 QEEIEAFRESARAEG---RSTLFRSPWRDADPTSHPDAPFVIRMKA-----------PRS 153

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   D  +  + F++  +    D  +L+SDG+ TY    LA     ++ G  ++I   
Sbjct: 154 GETVIEDEVQGTVRFQNETLD---DMVVLRSDGTPTYM---LAVVVDDHDMGVTHVIR-- 205

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           G DH     R   V  A+  +     V +   + L       K+SKR G      
Sbjct: 206 GDDHLNNAARQTMVYEAMGWE-----VPVWAHIPLIHGPDGKKLSKRHGALGVEE 255


>gi|121612346|ref|YP_001000523.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005457|ref|ZP_02271215.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249443|gb|EAQ72403.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 628

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 100/322 (31%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYER 347
           G+     ++T+    +   Q       + DD     +  D  + Y ++ D        + 
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIIYVWLDALFIYISSLDFQSKGENAKF 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              + ++++G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 248 WPAH-VHLVGKD----ILRFHAIYWPAFLMSVDLPLPEFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + VVD  GS++ R+ +L  
Sbjct: 303 VKPKEVVDAYGSEAFRYFLLRE 324


>gi|290889826|ref|ZP_06552913.1| hypothetical protein AWRIB429_0303 [Oenococcus oeni AWRIB429]
 gi|290480436|gb|EFD89073.1| hypothetical protein AWRIB429_0303 [Oenococcus oeni AWRIB429]
          Length = 498

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 103/295 (34%), Gaps = 27/295 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A    ++G  + R   I D       LA +V    +  
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGQFIIR---IED-----TDLARNVKDGEKSQ 59

Query: 189 LYNNDSDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           L +N   L   +  G      K+      ++ +  +     ++ L   K Y        +
Sbjct: 60  L-DNLQWLGIDWDEGPDKANSKYAPYRQTERAAQGVYQKYIDELLASGKAYKSYKTEATL 118

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++ +A    H       ++       I+D        G         P++   Q  D+ 
Sbjct: 119 KEEREAQAQAHQAPHYVYEYAGMTKEQIKDAQAKDEAVGLKSVVRFRVPENHDYQWQDLV 178

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           + ++   S  +G   D  + K+DG  TY  A +       +     + +V+ G DH    
Sbjct: 179 KGEVKINSKEIG--GDWVIQKADGMPTYNFAVV------IDDHLMEITHVLRGDDHVSNT 230

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   V  A   K          +  + +     K+SKR  D +       E+G 
Sbjct: 231 PKQLMVYEAFGWKAPAFGH----MALIIKAETGKKLSKRDEDTLQFIEQYRELGY 281


>gi|206889812|ref|YP_002248722.1| valyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741750|gb|ACI20807.1| valyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 943

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 41/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K L S       +  +   +     I     N TG +H+GH   A + D L   
Sbjct: 13  KPQEIEKKLYSFWEEKGFFKPDSDSEKPSYCIVIPPPNVTGTLHMGHALNATLQDILIRW 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D        V  + + +E 
Sbjct: 73  KRMLGY---------------------------AALWIPGTDHAGIATQNVVERQLLQEG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y      F E  W         ++    I + LK +    D          G    +
Sbjct: 106 IDRYQLGRTAFLERVWQ------WKESCGGRIIEQLKRIGASCDWSRLRFTMDEGLSQAV 159

Query: 274 RDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +++   L  +G +Y  +             S    + +    +L +    + +D ++ + 
Sbjct: 160 KEVFLRLFEEGLIYRDLRLINWCPRCHTALSDLEVEHEELEGKLYYIKYPLKEDPEKFIT 219

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      ++ + N+I
Sbjct: 220 VATTRPETMLGDTAVAVNPEDKRYKNLI 247


>gi|254423093|ref|ZP_05036811.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190582|gb|EDX85546.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 1130

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 81/245 (33%), Gaps = 25/245 (10%)

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFH 266
            + LA         F  E+W  + +D+ V      I   L     +   + +  +ED+  
Sbjct: 380 EQALAALDQQSDPQFVPERWTKVYRDWLVNLNDWCISRQLWWGHQIPAWYVVTATEDEIC 439

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
              P  +         +     G     K             L   ST+   +   P   
Sbjct: 440 DDTPFVVAKNETEAWEKAKAKYGDDIQLKQDPDVLDTWFSSGLWPMSTLGWPNTSTP--- 496

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D  + Y    L         GFD +I+         V R+  +A   + K     V + 
Sbjct: 497 -DYQFYYPTQTLVT-------GFD-IIFFW-------VARMTLMAGHFTGKMPFDTVYIH 540

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            LV   RD    KMSK  G+ I    ++D+ G+D++R+ ++        D      ++  
Sbjct: 541 GLV---RDENNQKMSKSKGNGIDPLVLIDKYGTDALRYTLVREVAGAGQDIRLDYDRQTD 597

Query: 447 KENPV 451
           + + V
Sbjct: 598 ESSAV 602



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 78/269 (28%), Gaps = 44/269 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+               +  +    G    +     N TG +H+GH     + DT+   
Sbjct: 19  DPTTTETKWQDYWQQNEVFKADPSKGGEPFCVMIPPPNVTGSLHIGHAFEQALIDTVVR- 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                          YQ+    N   LP   +  + ++ + +E 
Sbjct: 78  -------------------------------YQRMKGKNTLYLPGTDHASIAVQTILEEQ 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L    ++  Q+    I   L  L I  D          G  + +
Sbjct: 107 FADEGQTRESVGREKFLERAWEWKAQSG-GTIVGQLTKLGISADWSRERFTMDEGLSTAV 165

Query: 274 RDIIDNLARQGYVYEGIL---------PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
               + L  +G +Y G                   +K ++D K   FR  +VG++ +  +
Sbjct: 166 LTAFNQLYEEGLIYRGSYMVNWCPASQSAVSDLEVEKKEVDGKLWHFRYPLVGEEGELEV 225

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +         D A      +  + ++I
Sbjct: 226 ATT--RPETMLGDTAVAVNPNDERYRHLI 252


>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166200148|sp|A4IJG8|SYC_GEOTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
 gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 467

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 117/352 (33%), Gaps = 46/352 (13%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L + +    E    L     K+ +          +H+G+ R A+V DT+   + F GY+V
Sbjct: 6   LYNTLTRKKETFEPLEPNKVKMYV--CGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYDV 63

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELADKYSS 219
           T   Y+++     + L      R  + L  +   + E +       ++ +G + AD +  
Sbjct: 64  T---YVSNFTDVDDKLI-----RAARELGESVPAIAERFIEAYFEDIEALGCKKADIHPR 115

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              N           +  ++ +  +I     A  +  D++     F  G        ID 
Sbjct: 116 VTENI----------ETIIEFIQALIDKGY-AYEVDGDVYYRTRKF-DGYGKLSHQSIDE 163

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L        G       K     D     L   +       D P  K    +    + +A
Sbjct: 164 LQA------GARIEVGEKKDDPLDF---ALWKAAKEGEISWDSPWGKGRPGWHIECSAMA 214

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGM 396
               KY     + I +            E   A + A++ K      L    + +  +  
Sbjct: 215 ---RKY---LGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNE-- 266

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             KMSK  G+F+ +  ++ ++    +RF ML       +++    ++   + 
Sbjct: 267 --KMSKSLGNFVLVHDIIRQIDPQVLRFFMLSVHYRHPINYSEELLESARRG 316


>gi|319790219|ref|YP_004151852.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114721|gb|ADU97211.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 526

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 131/400 (32%), Gaps = 55/400 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH       D +A    F G +V      ++ G +I         +  + +  +  + 
Sbjct: 19  HLGHAYTTTAADVVARFNRFLGRDVFFLTGTDEHGQKI--------QQAAEKMGMSPKEF 70

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIRDDLKALN- 253
            +   P         E+ +      +   + + +  V+   ++      I   + +    
Sbjct: 71  VDRLVPVFKKL---WEVLNISYDHFIRTTDPEHVKAVQHIFMKCYENGDIYLGEYEGWYC 127

Query: 254 IQHDIFISEDDFHRGDP--------------------SPIRDIIDNLARQGYVYEGILPP 293
           I  + + +E D   G                      S  +D +  L  +   + G    
Sbjct: 128 IPCETYYTEKDLIDGKLCPACKREVTRVKEESYFFRLSKYQDKLLELYEKNPDFIGP-EF 186

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-------LKSDGSYTYFAADLAYFKC--K 344
            +++         K L    T     +  P+       +  D    Y  A + Y     +
Sbjct: 187 RRNEVINFVKQGLKDLSISRTSFSWGIPVPINEKHVIYVWFDALTNYLTA-VGYPDDTER 245

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             R +   ++++G D    + R  AV        A + V        +      KMSK  
Sbjct: 246 LNRYWPADLHLVGKD----ILRFHAVYWPAFLMSAGLPVPKRVFAHGWWTVEGEKMSKSK 301

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELL--DFDFCKVKEQSKENPVFYVQYAYARCR 462
           G+ +    VV++ G D VRF  L+R+ S  L  DF + K+  +        +   + R  
Sbjct: 302 GNVVDPFEVVEKFGVDQVRFF-LFREVSFGLDGDFSYEKLVARINGELANDLGNLFNRTL 360

Query: 463 SIF---RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           S+    R++    P  +FD   + +  +      +  +LI
Sbjct: 361 SMLKKYRKSVVPEPKGEFDELDKKIANKALATLKALKELI 400


>gi|300071900|gb|ADJ61300.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 483

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 122/349 (34%), Gaps = 59/349 (16%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R  +          GD +  +      +  RE ++ D 
Sbjct: 2   NKKIRVRY-APSPTGLLHIGNARTVLFNYLFARHHGGDFIIRI-----EDTDRERHVEDG 55

Query: 171 GA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP 225
              Q+  L      R+    ++   +  E Y        Y K++ + LA+  +      P
Sbjct: 56  ERSQLENL------RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYYSYKTP 109

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           EE      K  +       I +     + +   +I+E      +P  +R  +D       
Sbjct: 110 EELEADHAKQEAAGIPPHYINEYAGMSDDEKAAYIAERKAQNIEP-VVRISVDE------ 162

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
                         +  D+ + ++ F    +G   D  + K DG  TY   + A     +
Sbjct: 163 ----------KAIYKWNDIVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDH 207

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    ++I   G DH     +   V  A+  +  Q       +  +       K+SKR  
Sbjct: 208 DMQISHVIR--GDDHIANTPKQLVVYNALGWEAPQFGH----MTLIINSETGKKLSKRDT 261

Query: 406 DFITLRHVVDEVG--SDSV-RFMMLWRKNS--ELLDFDFCKVKEQSKEN 449
           + +       + G  SD++  F+ L   N   E   F   ++ E   EN
Sbjct: 262 NTLQFIEDYRKKGYMSDAIFNFIALLGWNPGGEKEIFSCEELIELFDEN 310


>gi|317046768|ref|YP_004114416.1| valyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948385|gb|ADU67860.1| valyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 951

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGREAFIDKIWQWKAESGGNISRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|268679313|ref|YP_003303744.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617344|gb|ACZ11709.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 642

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 80/483 (16%), Positives = 156/483 (32%), Gaps = 97/483 (20%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---------------- 180
           H+GH    ++ DT+A      GYE       ++ G +I   A S                
Sbjct: 19  HIGHAYTTIIADTMARYYRLKGYETFFLTGTDEHGQKIEEAAKSRGKTPQAYADEISGKF 78

Query: 181 ------VFWRYQQALYNNDSDLPE-------------GYYPGVYLKHVGKELADKYSSEL 221
                     Y + +   D++                  Y G Y  H        ++   
Sbjct: 79  RALWDEFEISYDKFIRTTDAEHKAGVQKAFQVMFDKGDIYKGEYEGHYCVSCETFFTDTQ 138

Query: 222 LNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           L   ++     K   +VK+ S    +   ++DL               ++  D   +   
Sbjct: 139 LVDEDKCPDCGKLTRLVKEESYFFKLSKYQEDLIK-------------WYNSDEKCVLPK 185

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
                   +V +G+     ++T+    +         + + DD     +  D    Y  A
Sbjct: 186 GKKNEVISFVKQGLRDLSITRTSFDWGVKL------PSSMNDDKHVMYVWLDALLNYTTA 239

Query: 337 DLAYFKCKYERGF--DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            L Y   +    F    M +++G D    H+ Y     A   ++     +          
Sbjct: 240 -LGYGGDEKNMEFWPATM-HLVGKDILRFHAIY---WPAFLMSLGLALPKHVAAHGWW-- 292

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKEN 449
             R+G   KMSK  G+ +  + V D  G ++ R+ ML      +  DF    + ++   +
Sbjct: 293 -TRNGE--KMSKSKGNVVNPKEVADAYGLENFRYFMLREVPFGQDGDFSQKALMDRINSD 349

Query: 450 PVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
               +     R   +  + +  +    D + F       ESE D  E +++ +       
Sbjct: 350 LGNELGNLLNRIIGMSGKYSNGVVNSKDVNTF------HESELDAVE-EILKN------- 395

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +EN  +  +  +   YL +L  V     ++        +V+    K+    L LV  V++
Sbjct: 396 VENNLLELQTNR---YLEELWKVLSI--ANQAITVHEPWVKIKEGKVEQA-LALVALVSN 449

Query: 569 IIN 571
           I+ 
Sbjct: 450 ILA 452


>gi|114777967|ref|ZP_01452881.1| Valyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
 gi|114551754|gb|EAU54306.1| Valyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
          Length = 882

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 62/215 (28%), Gaps = 43/215 (20%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++  +L          G +    +I             N TG +H+GH     + DTL  
Sbjct: 19  INDQWLSSDAFRPKADGDDAYCIVIPP----------PNVTGSLHMGHAFTFTIQDTLIR 68

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                                      S  W+            P   + G+  + V + 
Sbjct: 69  --------------------WQRMQGKSTLWQ------------PGTDHAGIATQMVVER 96

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           + DK      +   E++L  V ++   +    I + LK L    D          G    
Sbjct: 97  ILDKEGVHRRDLGRERFLDRVWEWKEHSG-GTIVNQLKQLGASCDWSRERFTMDEGLSHS 155

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +R++   L  +G +Y G          +    D +
Sbjct: 156 VREVFVRLYEEGLIYRGKRLVNWDPVLETAVSDLE 190


>gi|94269498|ref|ZP_01291478.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451195|gb|EAT02106.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 889

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      ++   +   L       +I     N TG +HVGH     + D L       G
Sbjct: 17  EQRWYQSWLAQKNFRATLDEDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQG 76

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V      + AG     +                               V ++LAD+  
Sbjct: 77  YNVLWLPGTDHAGIATQNV-------------------------------VERQLADQ-G 104

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   E+++  V  +  ++  +II   LK L    D          G  + ++ +  
Sbjct: 105 QSRHKLGREQFIERVWQWKEESGGQIINQ-LKRLGCSCDWDRERFTLDAGLSAAVKKVFV 163

Query: 279 NLARQGYVYEG 289
            L R+G +Y+G
Sbjct: 164 QLYREGLIYKG 174



 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     ++    +V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 494 WVARMMMMGLHFMDEVPFRHVYLHALV---RDKHGQKMSKSKGNVLDPLELMDRYGTDAL 550

Query: 423 RFMM 426
           RF M
Sbjct: 551 RFTM 554


>gi|70727478|ref|YP_254394.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|109894948|sp|Q4L3I9|SYC_STAHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68448204|dbj|BAE05788.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 466

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 107/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++      
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  D+ + Y    Y       +    S+  +    ++ +  +K+
Sbjct: 69  DVDDKLINRSKE-LNESVPDIADRYIKAFYEDVGALNVKKATSNPRVMNHMDEIIDFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     +      +      D   +   I+   ++    +  L    
Sbjct: 128 LVDEGYAYESDGDV-YFRTRKFEGYGKLSHQSLDDLKVGARIEAGEQKEDALDFTLWKKA 186

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                  +          +  G+            +    + +A+     E G    I+ 
Sbjct: 187 KPGEISWE----------SPFGEGRP--------GWHIECSVMAFH----ELGKTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V      
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVNAAKSG 314


>gi|307266364|ref|ZP_07547902.1| glutamyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918600|gb|EFN48836.1| glutamyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 485

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 41/286 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTG +H+G+ R A+     +       ++     ++ R         +   L    +
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSS------KEFEELIFKEL 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P G Y       +  + A K   E   +   +     ++      
Sbjct: 63  EWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAY---RCYCTPEELEEDRR 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + R D+   + +      E +             +   R+G         P  +  + 
Sbjct: 120 NAVERGDIPRYSGRCRYLTKEQE-------------EAFIREGRKPVIRFIIPDDEVIEF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH 
Sbjct: 167 EDMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +   +  A+  +  +          L       K+SKR G+ 
Sbjct: 220 YNTPKQILIYKALGFEIPKFAH-----APLILGPDRTKLSKRHGNT 260


>gi|255725126|ref|XP_002547492.1| valyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240135383|gb|EER34937.1| valyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 1097

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 96/355 (27%), Gaps = 70/355 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGT-----KVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +P Y+     S       +   L   G        +I     N TG +H+GH     + D
Sbjct: 144 NPKYVESSWYSWWEKQGFFEPELTEDGKIKSEGCFSIPCPPPNVTGALHIGHALTVSIQD 203

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G         + AG    ++     W  ++   ++        Y       
Sbjct: 204 TLIRWNRMQGKTTLFIPGFDHAGIATQSVVEKQIWAKEKKTRHD--------YGREKFIE 255

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              E  D+Y +                         I++  K L   +D    +   +  
Sbjct: 256 KVWEWKDEYHNR------------------------IKNQFKKLGASYDWTREKFTLNPD 291

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + +    +   G +Y        S                S +  D+ + P     
Sbjct: 292 LSEAVTEAFVRMHEDGTIYRAFRLVNWSVKLNTAI---------SNLEVDNKNIP----- 337

Query: 329 GSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYV--KRLEAVAA----AVSEKKAQ 380
           G           +  K E G        V+GSD    V   R E +      AV  K  +
Sbjct: 338 GRTLLAVP---GYDSKIEFGVLTSFSYQVVGSDEKLTVATTRPETIFGDTGVAVHPKDPR 394

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMMLWRKNSEL 434
              L  + V+            R    IT    VD E G+ +V+      +N   
Sbjct: 395 YTHLHGKFVQHP-------FLDRKLPIITDAETVDMEFGTGAVKITPAHDQNDYN 442


>gi|146186117|ref|XP_001033039.2| valyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146143176|gb|EAR85376.2| valyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 1037

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 105/371 (28%), Gaps = 58/371 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           P  + +       S   +  N             +     N TG +H+GH     V D++
Sbjct: 77  PKSVEQHWMRFWESKKYFHANPQNVLNGSKKPYVMVIPPPNVTGYLHIGHGLTTAVEDSI 136

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G+E      ++ AG   +++                               V 
Sbjct: 137 IRRKRMLGFETLYLPGVDHAGIATHSV-------------------------------VE 165

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+L  + +        E ++  V ++  +   +I +  L+ +    D             
Sbjct: 166 KKLLKEENKTRFQIGREAFVSKVWEWKEKHGNQITKQ-LRRVGGSLDWDRFHFTMDDQLS 224

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +++    L  +G +Y        S   +    D   +      + + + R +   DG 
Sbjct: 225 LAVKEAFCILFEKGLIYRSNRLVNWSCALKTAISD---VEVNHERIEEPITRTITGHDGK 281

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y    L +F  K +      I V  +        L  VA AV  K  +   ++ + + 
Sbjct: 282 --YEFGVLIHFSYKLKEDPSKEIIVATTRIE---TMLGDVAVAVHPKDPRYKDIIGKELI 336

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNS-------ELLDFDFCKV 442
                    +  R    I    +VD   G+ +V+       N         L   +    
Sbjct: 337 HPF------IPDRKMIVIADEELVDMNFGTGAVKITPAHDPNDYRCGLRHNLPQINILDD 390

Query: 443 KEQSKENPVFY 453
                EN   Y
Sbjct: 391 NGLINENGGPY 401


>gi|81429293|ref|YP_396294.1| cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|109894906|sp|Q38UZ6|SYC_LACSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78610936|emb|CAI55988.1| Cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 468

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 97/320 (30%), Gaps = 32/320 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+  DT+   + + GY+V       D   ++   A +      +
Sbjct: 28  CGPTVYNYIHIGNARSAIAFDTIRRYLEYRGYQVDYVSNFTDVDDKMIKAANAENITVPE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 +   E        K +  E A        N  E           V  +  +I  
Sbjct: 88  LADRYITAFKEDT------KALNIEPATLNPRATDNIEE----------IVAFIQDLIAK 131

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           D  A  +  D++     F        +D +D L +              +T +K D    
Sbjct: 132 DY-AYAVDGDVYYRARKFKAYGHLAGQD-LDQLEQG-----ASEHTATEETLRKEDPIDF 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L           + P  K    +      +       +   D  I + G          
Sbjct: 185 ALWKAEKGNEIAWESPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFPHH 238

Query: 368 EAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           E   A    K  Q  +N  L        D    KMSK  G+F+T+  ++ EV   ++RF+
Sbjct: 239 ENEIAQSEAKTGQTFVNYWLHNGFVTVGDD-DQKMSKSLGNFVTVHDLIQEVNPQALRFL 297

Query: 426 MLWRKNSELLDFDFCKVKEQ 445
           M   +    + +    + E 
Sbjct: 298 MSSTQYRRPIRYSQSLLAEA 317


>gi|27469211|ref|NP_765848.1| methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866027|ref|YP_187724.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366132|ref|ZP_06612819.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258352|sp|Q8CQU3|SYM_STAES RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81675420|sp|Q5HRR5|SYM_STAEQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|27316760|gb|AAO05935.1|AE016751_230 methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636685|gb|AAW53473.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319726|gb|EFE60085.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723953|gb|EGG60478.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329737889|gb|EGG74117.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMISGIKNLWSKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNINKY---TDRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|313891340|ref|ZP_07824956.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313120115|gb|EFR43291.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 937

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 33/248 (13%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D     + +  + EG   P   K+  + + D   + F S    + V +   +      + 
Sbjct: 511 DAWWTHSAKELLPEGFKSPYSGKSNFRKETDIMDVWFDSGSTWNGVVKQPREEWKGMAFP 570

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                             +Y+ GSD   G+ +     + AV+ K     +L         
Sbjct: 571 CD----------------LYLEGSDQHRGWFQSSLLTSVAVNGKAPYKALLTHGF---TV 611

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +  + +++  G+D +R  +        +      +K+ S       
Sbjct: 612 DGEGRKMSKSVGNVVAPQTIINRYGADVMRLWIASSDYQGDVRLSDKIIKQMSD------ 665

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
               Y + R+ +R       D D +   ++ IP     +  +  L+  L +    +  A 
Sbjct: 666 ---VYRKIRNTYRYLLSNLYDFDVE---KDAIPYNEMEEIDKWALLR-LEQVRDQVTKAY 718

Query: 514 IAQEPYKL 521
              E + +
Sbjct: 719 KNYEFHVM 726


>gi|300934274|ref|ZP_07149530.1| valyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 943

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 84/268 (31%), Gaps = 42/268 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + K L +  V    +  +        +I     N TG +H+GH     + D +A   
Sbjct: 33  PSIVEKTLYNGWVEAGYFKADTSSDKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRK 92

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYEV             +   ++   + +  L   +                     
Sbjct: 93  RMQGYEVL-------WLPGSDHAGIATQTKVEAKLKETE--------------------- 124

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                +  ++  E+++  V  +  Q    +I + ++A+    D          G    ++
Sbjct: 125 ---GKDRFDYGREEFIERVWKWKHQYG-DVITNQMRAVGDSVDWSRERFTLDDGLSRAVQ 180

Query: 275 DIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPLL 325
            I   L  +G +Y          +L    S        D  +L+  R   + DD    ++
Sbjct: 181 TIFKELYDKGLIYRANRMVNWSPVLQTAISDIEVVYSDDEGELVSIRYGSLNDDEPHVVI 240

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +    T    D+A      +  + +M+
Sbjct: 241 ATTRVET-MLGDVAVAVHPDDERYADMV 267


>gi|182677992|ref|YP_001832138.1| isoleucyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182633875|gb|ACB94649.1| isoleucyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 1001

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 91/277 (32%), Gaps = 42/277 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAAD- 337
           V   I+    ++       D     F +            DV      S GS   F  D 
Sbjct: 546 VNARIVEAFAAEGADAWFADGAAERFLAPDYDPALFEKINDVLDVWFDS-GSTHAFTLDD 604

Query: 338 ------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELV 389
                 LA  K   E G D ++Y+ GSD   G+      +  +   +  A  + +L    
Sbjct: 605 AREFPGLAGIKRLREGGRDEIMYLEGSDQHRGWFHSS--LLESCGTRGMAPYDAVLTHGF 662

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L   G   KMSK  G+    + V+ + G+D +R  +     S+ L      +   ++  
Sbjct: 663 VLDEQGR--KMSKSLGNVTAPQSVIKDAGADILRLWVAASDYSDDLRIGKQILSTFTE-- 718

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y + R+  R         D         P   E+D  E  ++  LAE    I
Sbjct: 719 -------TYKKLRNTIRWMLGSLAHYD-----AKQTPAYEEWDELERLMLHRLAELDGEI 766

Query: 510 ENATIAQE----PYKLAFYLYDLASVFHGHWSHGREN 542
            +A    +      +L+ +L    +     +   R++
Sbjct: 767 RDAYRRFDYKRVVARLSAFLN---TDLSAFYFDIRKD 800


>gi|281356569|ref|ZP_06243060.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316696|gb|EFB00719.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 646

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 124/436 (28%), Gaps = 71/436 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D LA        +       ++ G ++   A       +Q         
Sbjct: 20  HIGHAYTTILADVLARYYRSLNVDTFFLTGTDEHGQKVEKAAAKRGVSPKQQADETVVRF 79

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E +              D+Y  E++    ++     + Y  +              +  
Sbjct: 80  QELWKRLGITNDRFIRTTDEYHKEVVREILQELYDRDEIYKAEYTGWYC--------VGC 131

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + F +E D   G        +  +    Y +             +   D  Q  FR+   
Sbjct: 132 ERFYTEKDLVEGKCPECGREVSAIRESNYFFRMSKYQQWLIDYIQTHPDFIQPAFRANET 191

Query: 317 GDDVDRPL----------LKSDGSYTYFAADLAYFKCKYERGFDNMIY------------ 354
              + R L            S G    F AD   +       FD +I             
Sbjct: 192 LGFLKRELGDLCISRPKSRLSWGIELPFDADYVCYVW-----FDALINYISAVGYRRNQA 246

Query: 355 -----------VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                      ++G D    HS Y      +  A+     +        +         K
Sbjct: 247 EFEKWWPASYHLIGKDILTTHSVY---WPTMLKAIGLPMPRTIFAHGWWLT-----GNTK 298

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +    ++++ G D+ R+ +L   +    D +F +    ++ N          
Sbjct: 299 MSKSLGNVVNPMDMIEKCGVDAFRYFLLSEMSPGN-DANFSEESFVARYNSDLANDLGNL 357

Query: 460 RCRSI---FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR---VIENAT 513
             R +    R    I P  + +      + +E E   + ++  +   ++ +    + NA 
Sbjct: 358 LSRVLKMTLRSGGVIQPPAELNADDLE-LNREVETAIAAMETSLKAMKFDQGLNAVMNAV 416

Query: 514 IAQEPYKLAFYLYDLA 529
            A        YL   A
Sbjct: 417 RAGN-----RYLEKTA 427


>gi|312869466|ref|ZP_07729623.1| glutamate--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095013|gb|EFQ53300.1| glutamate--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 501

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 112/297 (37%), Gaps = 38/297 (12%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + + + +PTG +H+G+ + A+     A    F+G  V R   I D   + N    S
Sbjct: 3   QKVRVRY-APSPTGFLHIGNAQSALFNYLFAR--HFNGTMVLR---IEDTDTKRNV--QS 54

Query: 181 VFWRYQQALYNNDSDLPEG-------YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                ++ L+    D  EG       Y P    +   + +  KY  ELL+          
Sbjct: 55  GEDSQRENLHWLGIDWDEGPNKPNPKYAPYRQSERNAQGIYHKYIQELLDKGI-----AY 109

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           KDY+ +  ++ +R+  +  N +   +     + R +             +G         
Sbjct: 110 KDYTTEEELQEMRER-QRANKEAPHYDG-RWYGRSEEEQ-----KAAEAKGLKPTIRFHF 162

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           PK    Q  D+ R  + F S  +G D    + KSDG  TY   + A     +     +++
Sbjct: 163 PKDHEYQWDDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDITHVL 217

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
              G+DH     +  A+  A+  +      + C +  ++      K+SKR  D +  
Sbjct: 218 R--GADHISNTPKQMAIYEALGWEHP----VFCHIPLIFNPKTRKKLSKRDKDTLQF 268


>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 466

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 116/352 (32%), Gaps = 46/352 (13%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L + +    E    L     K+ +          +H+G+ R AVV DT+   + F GY+V
Sbjct: 6   LYNTLTRKKEPFEPLEPNKVKMYV--CGPTVYNYIHIGNARAAVVFDTIRRYLEFRGYDV 63

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELADKYSS 219
           T   Y+++     + L      +  + L  +   + E +       ++ +G + AD +  
Sbjct: 64  T---YVSNFTDVDDKLI-----KAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPR 115

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              N           D  ++ +  +I     A  +  D++     F           ID 
Sbjct: 116 VTENI----------DAIIEFIQALIDKGY-AYEVDGDVYYRTRKFREYG-KLSHQSIDE 163

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L        G       K     D     L   +       D P  K    +    + +A
Sbjct: 164 LQA------GARIEIGEKKDDPLDF---ALWKAAKEGEICWDSPWGKGRPGWHIECSAMA 214

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGM 396
               KY     + I +            E   A + A++ K      L    + +  +  
Sbjct: 215 ---RKY---LGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNE-- 266

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             KMSK  G+F+ +  ++ E+    +RF ML       +++    ++   + 
Sbjct: 267 --KMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHPINYSEELLESARRG 316


>gi|242241575|ref|ZP_04796020.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234956|gb|EES37267.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMISGIKNLWSKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNINKY---TDRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|241759700|ref|ZP_04757800.1| isoleucine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319708|gb|EER56104.1| isoleucine--tRNA ligase [Neisseria flavescens SK114]
          Length = 929

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVAQKIEGKGI--EAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYAVVLARQLQE 700


>gi|238925543|ref|YP_002939060.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238877219|gb|ACR76926.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 673

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/408 (13%), Positives = 118/408 (28%), Gaps = 60/408 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I + S  P    H+G+    ++ D +A      GY+V  +   ++ G +I   A +
Sbjct: 1   MTTAIAYTSGKP----HIGNTYEIILADAIARYKRAEGYDVYFQTGTDEHGQKIQEKAEA 56

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                ++ +     ++         +  +     D +        E+    I K    Q 
Sbjct: 57  AGISPKEYVDQISGEVK-------RIWDLVNSSYDNFVRTTDEDHEKCVKKIFKKLYDQG 109

Query: 241 MMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              I +   + L     + F +E     G        +     + Y ++      +    
Sbjct: 110 --DIYKGSYEGLYCTPCESFWTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRLIDY 167

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMI 353
                D  Q + R   + ++   P             DL   +  +  G    FD  +++
Sbjct: 168 INTHPDFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFSWGIPVDFDPKHVV 217

Query: 354 YVM-------------GSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--- 395
           YV                D S   + K   A    + +   + + +   +  +  D    
Sbjct: 218 YVWLDALTNYITKIGYDPDGSSELFKKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLP 277

Query: 396 -----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
                         KMSK  G+ I    +V   G D+ R+ +L            +  V 
Sbjct: 278 KQVFGHPWLLQGGDKMSKSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGIITWDLVI 337

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           E+   +    +     R  S+  +  D            +    +++ 
Sbjct: 338 ERFNSDLANILGNLVNRTVSMSNKYFDGIVKSTGATGDADQTAIDADL 385


>gi|94269042|ref|ZP_01291356.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451369|gb|EAT02231.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 889

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      ++   +   L       +I     N TG +HVGH     + D L       G
Sbjct: 17  EQRWYQSWLAQKNFRATLDEDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQG 76

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V      + AG     +                               V ++LAD+  
Sbjct: 77  YNVLWLPGTDHAGIATQNV-------------------------------VERQLADQ-G 104

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   E+++  V  +  ++  +II   LK L    D          G  + ++ +  
Sbjct: 105 QSRHKLGREQFIERVWQWKEESGGQIINQ-LKRLGCSCDWDRERFTLDAGLSAAVKKVFV 163

Query: 279 NLARQGYVYEG 289
            L R+G +Y+G
Sbjct: 164 QLYREGLIYKG 174



 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     ++    +V L  LV   RD    KMSK  G+ +    ++D  G+D++
Sbjct: 494 WVARMMMMGLHFMDEVPFRHVYLHALV---RDKHGQKMSKSKGNVLDPLELMDRYGTDAL 550

Query: 423 RFMM 426
           RF M
Sbjct: 551 RFTM 554


>gi|126697618|ref|YP_001086515.1| cysteinyl-tRNA synthetase [Clostridium difficile 630]
 gi|122974209|sp|Q18CD5|SYC_CLOD6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 468

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 126/431 (29%), Gaps = 101/431 (23%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  ++ DTL   + + GY+VT   Y+                  Q 
Sbjct: 30  CGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVT---YV------------------QN 68

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +D  +   +  G+  + V  +   +Y  +            +K  +V   +     
Sbjct: 69  FTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLG-------IKRATVHPQVTD--- 118

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGILPPPKSK 297
                                +   I + I  L  +GY Y                 K  
Sbjct: 119 ---------------------NIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLS 157

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAA----DLAYFK---CKYERG 348
             ++ D++    +  +      +D  L   K +G   + +        +        +R 
Sbjct: 158 GQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRY 217

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I +            E   A    +  +       +   Y +    KMSK  G+F 
Sbjct: 218 LGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKYW-MHNGYININDEKMSKSKGNFF 276

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VRF ML       ++F   ++  Q+K                   + 
Sbjct: 277 TVRDISKLYDLEIVRFFMLSAHYRNPVNFS-DEMLNQAKAG---------------LERL 320

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAF 523
            +    L+F L        ES     E++L+  L ++ +   +A             +  
Sbjct: 321 YNTKEKLEFTLSNL----VESPLTEKEVELVKELDDFRQKFIDAMDDDVNTADAVSVI-- 374

Query: 524 YLYDLASVFHG 534
             ++LA + + 
Sbjct: 375 --FELAKLINS 383


>gi|78485844|ref|YP_391769.1| valyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78364130|gb|ABB42095.1| valyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 924

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 68/245 (27%), Gaps = 35/245 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  P+ +             +       G   +I     N TG +H+GH     + DTL 
Sbjct: 4   HFDPNSIETKWYQTWEKSGYFKPQTSTTGEHYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G E   +   + AG     +                               V +
Sbjct: 64  RYHRMRGDETLWQPGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA K      +   + +   + ++  ++    I   L+ L    D          G   
Sbjct: 93  QLAAK-GLSRHDLGRDAFTQKIWEWKAESG-GTITQQLRRLGASPDWSRERFTMDDGLSD 150

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L  +G +Y G               D + L          +  PL  SDGS 
Sbjct: 151 AVKEVFVQLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEEMGSLWHMRYPL--SDGSG 208

Query: 332 TYFAA 336
               A
Sbjct: 209 HLIVA 213


>gi|326391120|ref|ZP_08212666.1| glutamyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992819|gb|EGD51265.1| glutamyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 485

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 41/286 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTG +H+G+ R A+     +       ++     ++ R         +   L    +
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSS------KEFEELIFKEL 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P G Y       +  + A K   E   +   +     ++      
Sbjct: 63  EWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAY---RCYCTPEELEEDRR 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + R D+   + +      E +             +   R+G         P  +  + 
Sbjct: 120 NAVERGDIPRYSGRCRYLTKEQE-------------EAFIREGRKPVIRFIIPDDEVIEF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH 
Sbjct: 167 EDMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +   +  A+  +  +          L       K+SKR G+ 
Sbjct: 220 YNTPKQILIYKALGFEIPKFAH-----APLILGPDRTKLSKRHGNT 260


>gi|314932712|ref|ZP_07840082.1| methionine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654542|gb|EFS18294.1| methionine--tRNA ligase [Staphylococcus caprae C87]
          Length = 657

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 16  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 68  TELEYLDEMIAGIKSLWDKLEIS---NDDFIRTTEERHKQVVEKV------------FER 112

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   I         +   +  +
Sbjct: 113 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGEI---IGGKSPDSGHEVELVKEE 169

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 170 SYFFNINKY---TDRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 226

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D   + K   A    ++++  + + ++  ++ 
Sbjct: 227 VPSNPKHVVYVWIDALVNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILL 286

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 287 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 339


>gi|220913018|ref|YP_002488327.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859896|gb|ACL40238.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 519

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 103/324 (31%), Gaps = 32/324 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      GY+V      ++ G +I   A       ++ +  
Sbjct: 18  PNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQTAEKEGITPKELVDR 77

Query: 192 NDSDLPEGY--YPGVYLKHVGKELADKYSSE---LLNFPE---------EKWLPIVKDYS 237
           N       +      Y + +     D Y++                   E W  +  +  
Sbjct: 78  NAEIYKAAHEALGITYDRFIRTTDEDHYAASQAIWKKMEANGDIYLDKYEGWYSVRDEAF 137

Query: 238 VQAMMKIIRDDLKALNIQHDI---FISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
                 +++DD    + + D    + +E+ +     +    ++     Q           
Sbjct: 138 YGEDETVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQDKLLALYEAQPEFGAPQSRFN 197

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKY 345
            +     +  +   + R    +   + G+      +  D    Y       D+   K + 
Sbjct: 198 EVISFVKRGLEDLSISRTTFDWGVPVPGNSNHVMYVWVDALTNYLTGVGYPDVDSEKFRR 257

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               D  ++V+G D    + R  A+        A + +    ++  +     +KMSK  G
Sbjct: 258 FWPAD--VHVIGKD----ISRFHAIYWPAFLLSAGLELPKRVMIHGFLHNNGVKMSKSLG 311

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +     V++ G D VRF  L  
Sbjct: 312 NVVAPADFVEQYGLDQVRFFFLRE 335


>gi|167760642|ref|ZP_02432769.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704]
 gi|167661767|gb|EDS05897.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704]
          Length = 637

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 117/391 (29%), Gaps = 57/391 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MDKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ +      +         +  +     DK+        E++   I K   
Sbjct: 61  AEEAGVTPKEFVDGVAGQIQT-------IWDLMNTSYDKFIRTTDADHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q    I +   + +     + F +E     G        +     + Y ++      + 
Sbjct: 114 DQG--DIYKGYYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRL 171

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD-- 350
                   +  Q + R   + ++   P             DL   +  ++ G    FD  
Sbjct: 172 IEHINSHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDPE 221

Query: 351 NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +++YV                 G     + K   A    + +   + + +   +  +  D
Sbjct: 222 HVVYVWLDALTNYITGIGYDCGGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALD 281

Query: 395 G--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                             KMSK  G+ +    +VD  G D+VR+ +L            +
Sbjct: 282 LPLPKQIFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISW 341

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             + E+   +    +     R  S+  +  D
Sbjct: 342 ELMVERMNSDLANTLGNLVNRTISMTNKYFD 372


>gi|328859709|gb|EGG08817.1| hypothetical protein MELLADRAFT_84374 [Melampsora larici-populina
           98AG31]
          Length = 467

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 99/338 (29%), Gaps = 73/338 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       ++     +  R  ++  A   + +L  ++ 
Sbjct: 37  APSPTGFLHLGGLRTALFNHLLARKMGAQWILRIE--DTDRTRFVEGA---LESLIKTLH 91

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G Y     KH+  E A K     L   ++ +        +  M 
Sbjct: 92  WAGLDYDEGPDRPGSCGPYIQSERKHIYHEHAKK-----LIESDQAYPCFCSPNRLSEMR 146

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                            + +       P  ++D I        +    +     +     
Sbjct: 147 D-------RFRTSGSHLVYDRKCLNLSPEEVKDQISQGTSH-VIRFKAIVQNTDEAIDCQ 198

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD--H 360
           D    QL F +       D  LLK+DG  TY  A                  V+     H
Sbjct: 199 DSVYGQLNFPNDTQD---DVILLKADGMPTYHFA-----------------NVVDDHLMH 238

Query: 361 SGYVKRLEAVA----------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF--- 407
             +V R E              A+  +           + L  +    K+SKR+GD    
Sbjct: 239 ISHVLRGEEWLSSTPKHLLLYKALGFQPPNFVH-----LPLLVNADGSKLSKRSGDVRVE 293

Query: 408 ------ITLRHVVDEV---GSDSVRFMMLWRKNSELLD 436
                      +++ V   G +  R   L +   E  D
Sbjct: 294 DFIAKGYEPEALLNFVALMGMNHSRHASLSKTKDETTD 331


>gi|303326356|ref|ZP_07356799.1| glutamate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864272|gb|EFL87203.1| glutamate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 463

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 93/286 (32%), Gaps = 51/286 (17%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+    LA              +    G     +  +   
Sbjct: 4   VVTRFAPSPTGHLHIGGARTAIFCWLLAR-------------HYG--GRFHLRIEDTDLL 48

Query: 184 RYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           R +Q   ++       L   +  G+  +    +L + Y  +LL      W        V+
Sbjct: 49  RSKQEYTDSILASMRWLGLDWDGGLTYQTRRTDLYNSYVDKLLETGHAYWCS-CTPEEVE 107

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM +  R     L  +++      D   G                   EG     K+  T
Sbjct: 108 AMREEARQ--NGLKPRYNGHCRTRDLGPG-------------------EGRCVRLKTPLT 146

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            K   D       +  VG+  D  + ++DG  TY   ++A     +E G  ++I   G D
Sbjct: 147 GKVVFDDMVKGKIAVDVGELDDMVIRRADGMPTY---NMAVVVDDHEMGITHVIR--GDD 201

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R   +  A+     +        V +       K+SKR G
Sbjct: 202 HVSNTPRQILIYEALGLPVPRFGH-----VPMILGPDRQKLSKRHG 242


>gi|282915852|ref|ZP_06323617.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282320148|gb|EFB50493.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 471

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 114/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 4   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 61

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 62  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 113

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    E  +  +KD   Q           A     D++     F  G        
Sbjct: 114 TSNPRVMDHMEDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       D P  +    +    +
Sbjct: 164 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECS 214

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 215 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 266

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 267 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 319


>gi|254500225|ref|ZP_05112376.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222436296|gb|EEE42975.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 979

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 52/178 (29%), Gaps = 32/178 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       GY+V  +   + AG     +            
Sbjct: 48  PNVTGSLHMGHALNNTLQDILVRWKRMQGYDVLWQPGTDHAGIATQMV------------ 95

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V +ELA        +   E ++  V +   ++    I   L
Sbjct: 96  -------------------VERELAADNKPGRRDMGREAFIERVWEQKRKSE-GTILGQL 135

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           K L    D   +E          +  +  +L ++G +Y            +    D +
Sbjct: 136 KRLGASCDWSRTEFTMSPNLSDAVLKVFVDLYKEGLIYRSKRLVNWDPKFETAISDLE 193


>gi|551758|gb|AAA72379.1| arginyl-tRNA synthetase [Buchnera aphidicola]
          Length = 85

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 1  MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
          M + +   ++           IK +  I  +I+I++ ++  +GH   N    +S    + 
Sbjct: 1  MNILSKLRNK------IKKSLIKSKILINQKIIIQKNKNEKNGHYQLNNLYSISNFNNMS 54

Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
          P  +++ I+  +     +  +  +   FIN+
Sbjct: 55 PEILSKKIIKNMSSQKMIQKMVFSKPCFINI 85


>gi|221195813|ref|ZP_03568866.1| leucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184287|gb|EEE16681.1| leucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 859

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        G+        +  K  +E     P+G +H+GH R   +GD +A      GY
Sbjct: 28  KWQHIWDEEGLYKTEEDPARPKKYVLEMF-PYPSGDLHMGHARNYTIGDAMARQARMRGY 86

Query: 160 EV 161
           +V
Sbjct: 87  DV 88


>gi|218778354|ref|YP_002429672.1| valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218759738|gb|ACL02204.1| Valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 888

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 57/202 (28%), Gaps = 37/202 (18%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L   Y    +     +   S   +     G     +I     N TG +H+GH     + 
Sbjct: 4   KLDKGYEPHDVEAHWYAFWESEGLFAAKEEGGDNTYSIVIPPPNVTGVLHMGHALNVTLQ 63

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G  V                           L+   +D        V  +
Sbjct: 64  DILCRYRRSKGDNV---------------------------LWMPGTDHAGIATQNVVER 96

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  E  D++         E ++  V ++  Q    II   LK L    D          
Sbjct: 97  QLASEGTDRH-----QVGREAFIERVWEWRKQYGGAIINQ-LKRLGASCDWDRERFTMDE 150

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
           G    +R +  +L  QG +Y G
Sbjct: 151 GLSRAVRKVFVDLYDQGLIYRG 172


>gi|332703470|ref|ZP_08423558.1| leucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553619|gb|EGJ50663.1| leucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 833

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 92/276 (33%), Gaps = 57/276 (20%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHS----GYVK 365
            +      ++     +  + T+   D A+     KY    D   Y+ G +H+     Y +
Sbjct: 496 ETDTFDTFMESSWYYARYTSTHST-DAAFDDAALKYWLPVDQ--YIGGIEHAILHLLYSR 552

Query: 366 RLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
               V   +      +    L     + +DG   KMSK  G+ +    ++   G+D+ R 
Sbjct: 553 FFIKVLRDMGYPVPDEPFASLLTQGMVIKDGA--KMSKSKGNVVDPGDMIGRYGADTTRL 610

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-----FDL 479
            +L+    E       +  +Q  E    ++         ++R  +++ PDL       DL
Sbjct: 611 FILFAAPPE----KELEWSDQGVEGASRFLG-------RLWRLVEELLPDLSASGACADL 659

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP-----YKLAFYLYDLASVFHG 534
            P  + P+  +    E             ++  T   EP       +A  + +L    + 
Sbjct: 660 DPATLSPRTKDLRRKE----------HETVQRVTRDLEPPFQFNTVIAA-VMELV---NE 705

Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            +    E       +A           L  AVA+++
Sbjct: 706 LYHAKDELRATDQGKA----------ALSSAVATVL 731



 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K         +    +   K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 13  QKWQDEWRERRLFAAESTSDKPKYYVLEMF-PYPSGKIHMGHVRNYSIGDVVARYKRMRG 71

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + V      +  G      A+       +  + N  ++        Y     +ELA    
Sbjct: 72  FHVLHPMGWDAFGLPAENAAIKHGIHPAKWTFANIDEMRAQLQRMGYSYDWERELATCTP 131

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                    KW  +     ++  +   R   +         ++ +    G       +++
Sbjct: 132 EYY------KWEQLFFISMMEKGLAYRRKSPQNWCPDCHTVLANEQVEDGKCWRCDAVVE 185

Query: 279 NLA 281
              
Sbjct: 186 QKE 188


>gi|321313708|ref|YP_004205995.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019982|gb|ADV94968.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 664

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V                   +    +     
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDV-----------------RYLTGTDEHGQKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     ++   +    L    + ++   +      + K+ +  L  
Sbjct: 60  QQKAEQENITPQEYVDRAAADIQKLWKQ--LEISNDDFIRTTEKRHKVVIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   I             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDIERNEKGEV---IGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR   +G   DR L   + + T+                    DLA  +  ++ G     
Sbjct: 175 FR---MGKYADRLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPE 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|300865838|ref|ZP_07110584.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300336162|emb|CBN55742.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 912

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 50/196 (25%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P                +  +    G    I     N TG +H+GH     + D L   
Sbjct: 10  DPFATEAKWQKYWEDHQIFKADPEKGGEPYCIIIPPPNVTGSLHMGHAFNNSLIDALIRY 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                                     LP   +  + ++ + ++ 
Sbjct: 70  HRMKGDNTLC--------------------------------LPGTDHASIAVQTILEKQ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L     +  ++    I + L+ L +  D          G    +
Sbjct: 98  LKAEGKTRYDLGREKFLEKAWQWRAESG-GTIVNQLRRLGLSADWSRERFTMDEGLSKAV 156

Query: 274 RDIIDNLARQGYVYEG 289
            +    L  +G +Y G
Sbjct: 157 LEAFIRLYEEGLIYRG 172


>gi|218437125|ref|YP_002375454.1| DALR anticodon binding domain protein [Cyanothece sp. PCC 7424]
 gi|218169853|gb|ACK68586.1| DALR anticodon binding domain protein [Cyanothece sp. PCC 7424]
          Length = 280

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 24/133 (18%)

Query: 455 QYAYARCRSIFRQAKDIFPDLDFD----------LFPRNVIPQESEFDTSELQLIVHLAE 504
           QY +ARC S+ R   ++   ++F+              N IP +   +  E +LI  +  
Sbjct: 147 QYTHARCCSLLR-LGELEGIIEFECEFLAQQRWLWKAPNPIPWKVLNENREYRLISQILH 205

Query: 505 YPRVIENAT-IAQE--PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
               IE  T        ++L              W   R       ++    +L   RL 
Sbjct: 206 LVDDIEEITPKNFTIVAHQLCE----------AFWDFERYCRIWGEIKEKTPQLAQARLG 255

Query: 562 LVHAVASIINSGL 574
           LV     ++ S L
Sbjct: 256 LVAVTQMLLQSLL 268


>gi|167756278|ref|ZP_02428405.1| hypothetical protein CLORAM_01810 [Clostridium ramosum DSM 1402]
 gi|167703686|gb|EDS18265.1| hypothetical protein CLORAM_01810 [Clostridium ramosum DSM 1402]
          Length = 495

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 114/353 (32%), Gaps = 88/353 (24%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+ G  +A       ++     +  RE            + +   
Sbjct: 28  APSPTGYMHIGNLRTALYGYLIAKKDDGDFILRIEDTDQAREV--------AGAIDVIYQ 79

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L  ++    +G Y G Y++    E+  KY+ EL+      +      +  Q  +
Sbjct: 80  TLSDTGLEYDEGPDKDGGY-GPYIQSQRLEIYQKYAHELVKLNGAHYC-----FCNQENV 133

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  ++D +           E+             I+ L  +   Y       + +TT   
Sbjct: 134 KGNKED-QIFKDPCHQLSDEE-------------IEKLLSENKPYVIRQTIKQGQTTFND 179

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-- 360
           ++  +  +   T+     +  LLKSDG  TY               F N+I     DH  
Sbjct: 180 EVYGEITVDNDTLD----EGVLLKSDGYPTY--------------NFANIID----DHLM 217

Query: 361 -SGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---- 410
              +V R     A+     +  +     +     V         K+SKR GD        
Sbjct: 218 SITHVVRGNEYLASTPKYNIIYQTFNWEIPTYIHVPPVMKDEQHKLSKRNGDASYQDLIK 277

Query: 411 -----RHVVDEVG---------------SDSVRFMMLWRKNSELLDFDFCKVK 443
                  V++ +                S+ ++   + R +     FD  K+K
Sbjct: 278 QGYLNEAVINYIALLGWAPEGEEEIFSLSELIKNFDIKRISKAPAIFDLDKLK 330


>gi|162447403|ref|YP_001620535.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985510|gb|ABX81159.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 859

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 87/293 (29%), Gaps = 45/293 (15%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
            +  G       + K     +     N TG +H+GH     + D +       G++    
Sbjct: 22  WLKEGFFESGKDLNKTPFTVV-IPPPNVTGKLHLGHAWDTAIQDIIIRRKRMQGFDAL-- 78

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           Y        ++   ++   R    L +           G+    +G+E   KY  +   +
Sbjct: 79  YLPG-----MDHAGIATQARIDDRLKS----------QGISRYDLGRE---KYLVKAWEW 120

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
            EE  L              IR   KAL +  D               +  +   L  +G
Sbjct: 121 KEEYSL-------------HIRAQWKALGLSLDYTKERFTLDEKLNEAVNKVFITLYNKG 167

Query: 285 YVYEGILPPPKS-------KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           ++Y G                 +    + +  L+  T    D+D  L  +        AD
Sbjct: 168 WIYRGYRIINWDCQAKTALSNIEVEYEETQGNLYHFTYPFVDMDGGLTIATTRPETMFAD 227

Query: 338 LAYFKC----KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            A        +Y++    ++Y+ G++    V   + V  A      ++     
Sbjct: 228 QALMVHPEDERYKKYIGKLVYIPGTNTKIPVIEDDYVDKAFGTGVVKVTPAHD 280


>gi|149178687|ref|ZP_01857271.1| valyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842462|gb|EDL56841.1| valyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 974

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 69/246 (28%), Gaps = 36/246 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P   ++           +      +  +  I     N TG +H+GH     V D +   
Sbjct: 10  NPESAQQKWYQFWEEKGYFHAEPDPEKEQHTIMIPLPNVTGALHMGHALNGTVQDLITRW 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                           +AL+   +D        V    V + +
Sbjct: 70  RRMQGY---------------------------EALWMPGTDHAGIATQAV----VERRM 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++ +    +   E  +  + D+  Q   +I+   L+ L    D   +           +
Sbjct: 99  KEEENLTRHDIGREALVERIWDWKDQYEKRILNQ-LRKLGASCDWQRTRFTLDDMCSKAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD--VDRPLLKSDGSY 331
           R     L     +Y G          Q    D +  +F   + G       P++ SD   
Sbjct: 158 RRTFLKLFSDDLIYRGKRLVNWDPFLQTAVADDE--VFSEDIAGQFWTFQYPVVDSDERI 215

Query: 332 TYFAAD 337
           ++    
Sbjct: 216 SFSTTR 221


>gi|84488953|ref|YP_447185.1| hypothetical protein Msp_0124 [Methanosphaera stadtmanae DSM 3091]
 gi|84372272|gb|ABC56542.1| CysS [Methanosphaera stadtmanae DSM 3091]
          Length = 456

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 117/380 (30%), Gaps = 89/380 (23%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V                       Y Q + + D  +
Sbjct: 36  HIGHARTYISFDVIVRYLKHEGYSVF----------------------YLQNITDIDDKI 73

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            +               A + + + L          +KD           + L   N+  
Sbjct: 74  IKR--------------AKENNEDPLELSHRFEKEYLKDM----------ETLNVSNVNF 109

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQL----- 309
             +    +      + I+D+ID    +GY Y  E  +    SK      +  + L     
Sbjct: 110 --YARATEHMNEIINQIQDLID----KGYAYDTETGVYFDVSKFEDFGKLSNRNLDDLQN 163

Query: 310 --LFRSTMVGDDVDRPLLKS------------DGSYTYFAADLAYFKCKYERGFDNMIYV 355
             +   +   D  D  L K             +G   +   D A  +  +   +D    +
Sbjct: 164 TRIQIDSTKKDPKDFALWKKQDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYD----I 219

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G          +A  A +     +  ++   +   + +    KMSK  G+FIT++ +++
Sbjct: 220 HGGGLDLIFPHHDAEIAQMEASSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLE 279

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            V  +  RF +L       +DF    +K+   EN +  +Q             K I   L
Sbjct: 280 IVTPEVYRFFVLSTHYRSPIDFSEDTLKQA--ENSLKRIQNT----------GKIIIDKL 327

Query: 476 DFDLFPRNVIPQESEFDTSE 495
             D  P   +  E      E
Sbjct: 328 TEDNLPEGKVLDEDLELFKE 347


>gi|73663575|ref|YP_302356.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582280|sp|Q49UZ9|SYM_STAS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72496090|dbj|BAE19411.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 658

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 115/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH      GD +A      GY+V      ++ G +I           ++A   
Sbjct: 15  PSGNLHIGHAYTTTAGDVIARYKRMQGYDVRYLTGTDEHGQKI----------QEKAQKA 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             S++        YL  +   + D +    ++  +      ++   V      ++   + 
Sbjct: 65  GKSEI-------EYLDEMIAGIKDLWGKLEISNDDFIRTTEIRHKEV------VQQIFER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLAQGDIYLGEYEGWYSVPDETYYTETQLVDPIMENGVI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGF- 349
              F    +    DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFN---LSKYTDRLLEFYDENPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGIR 225

Query: 350 -----DNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + K   A    ++++  + + ++  ++ 
Sbjct: 226 VQSNPKHVVYVWIDALVNYISSLGYLSDDDSLFKKYWPADIHIMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    +++  G D+ R+ ++  
Sbjct: 286 MALDIPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLINRYGLDATRYYLMRE 338


>gi|304391388|ref|ZP_07373330.1| valyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295617|gb|EFL89975.1| valyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 1050

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 58/204 (28%), Gaps = 35/204 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       GY V  +  ++ AG     +            
Sbjct: 45  PNVTGSLHMGHALNNTLQDILVRWKRMLGYNVLWQPGMDHAGIATQMV------------ 92

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V ++LA+           E ++  V ++  ++   I    L
Sbjct: 93  -------------------VERKLAETQQPSRREMGRETFIEKVWEWKEESGGTIFNQ-L 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K L    D          G    + ++   L  +G +Y G          +    D +  
Sbjct: 133 KRLGASCDWSRERFTMDEGLSKAVVEVFVKLYDEGLIYRGKRLVNWDPHFETAISDLEVE 192

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTY 333
              +         PL    G  TY
Sbjct: 193 NIETNGHMWHFKYPLA---GGQTY 213



 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVR- 390
             +LA  Y       GFD +I+   +        +      + ++  + +       V  
Sbjct: 636 TPELASHYQTDVLVTGFD-IIFFWVAR------MMMMGLHFMKDEDGKPVEPFHTVYVHA 688

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 689 LVRDKTGAKMSKSKGNVIDPLELMDEYGTDALRFTL 724


>gi|187934680|ref|YP_001884366.1| methionyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187722833|gb|ACD24054.1| methionine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 645

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/416 (15%), Positives = 134/416 (32%), Gaps = 94/416 (22%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI-SEDDFHRGDPSPI 273
           D++  ++    EEK +  ++   V  ++  I+D    +N+ +D FI + DD+H      +
Sbjct: 54  DEHGQKIQRIAEEKGITPIE--HVDEIVAGIKDLWSMMNVSYDKFIRTTDDYH---VKAV 108

Query: 274 RDIIDNLARQGYVYEGILPPPK-------------------SKTTQKCDMDRKQLLFRST 314
           +DI   L  QG +Y+                                     +   F+ +
Sbjct: 109 QDIFKKLHDQGDIYKSSYEGWYCTPCESFWTDTQLVNGNCPDCGRPVEKSKEEAYFFKMS 168

Query: 315 MVGDDVDRPLL----------KSDGSYTYFAA----DLAYFKCKYERG----FD--NMIY 354
              D + + +           + +     F      DL   +  ++ G    FD  +++Y
Sbjct: 169 KYADRLIKYIEENPNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDESHVVY 228

Query: 355 VM-----------GSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----- 395
           V            G        Y K   A    + +   + + +   ++ +  D      
Sbjct: 229 VWIDALSNYITALGYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQ 288

Query: 396 ---------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                       KMSK  G+ +    +V+E G D VR+ +L       + F    +    
Sbjct: 289 VFGHGWLLVDGGKMSKSKGNVVDPVVLVNEFGVDPVRYYLLRE-----IPFGADGL---- 339

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             N   +++   +   +           +    F   + PQ    +  E +LI      P
Sbjct: 340 -FNNEIFIKKINSDLCNDLGNLLSRSVAMIEKYFDGEIQPQAESGEFDE-ELINLALAAP 397

Query: 507 RVIENATIAQE-PYKLA-FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
             ++ A      P  LA  ++++L    + +      +    ++ A +      RL
Sbjct: 398 NKVQEAIDELNIP--LALEHVFELIGRANKY-----IDETTPWILAKDES-KKARL 445


>gi|117619483|ref|YP_855224.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166228633|sp|A0KG39|SYI_AERHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117560890|gb|ABK37838.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 953

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 96/260 (36%), Gaps = 30/260 (11%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFISEDDFHRG 268
           E+       +    +  W+P      +QAM++   D     +             +    
Sbjct: 442 EIERIEQDGIKQHGQSGWVPAWGKNRIQAMVENRPDWCISRQRTWGVPISLFVHKETQEL 501

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKS 327
            P  +R           ++E      +S      D+D+ +LL     + D V   L +  
Sbjct: 502 HPESVR----------LMHEVAKRVEQSGIQAWWDLDKAELLGSDADLYDKVPDTLDVWF 551

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLC 386
           D   T+ +   A  + ++     +M Y+ GSD   G+      +  A+ +K     VL  
Sbjct: 552 DSGSTHSSVVDA--RPEFNGNPADM-YLEGSDQHRGWFMSSLMIGVAMKDKAPYNQVLTH 608

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                  DG   KMSK  G+ ++ + V++++G+D +R  +     +  +     ++ ++S
Sbjct: 609 GF---TVDGQGRKMSKSIGNVVSPQDVMNKLGADILRLWVASTDYTGEMTVS-DEILKRS 664

Query: 447 KENPVFYVQYAYARCRSIFR 466
            +        AY R R+  R
Sbjct: 665 AD--------AYRRIRNTAR 676


>gi|332796279|ref|YP_004457779.1| glutamyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694014|gb|AEE93481.1| glutamyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 570

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 34/234 (14%)

Query: 52  ILSRPLGLDP------LTIA---ELIVAR---IKIDPDVDSVFIAGKGFINLYLSPSYLR 99
           ++S+ LG  P        IA   + IV +   + ++     +                  
Sbjct: 28  VMSKVLGEKPELKPKAKEIAKRVQEIVEKVNSMSLEDQKKELEAKFP------------- 74

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           ++L+       +     +       I   + NP GP+H+G+ R A++    A +    G 
Sbjct: 75  EMLTKKKTEEEKKTLPPLPNVKGEVITRFAPNPDGPIHLGNTRAAILSYEYARMYK--GK 132

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADK 216
            + R    +D   ++       +   ++ L        E +           V KE+ +K
Sbjct: 133 FILR---FDDTDPKVKKPLREAYDWIREDLKWLGITWQEEFTASSRLERYYEVAKEMIEK 189

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                ++   E+    +K+    ++    R      N++    + E  F  G+ 
Sbjct: 190 -GYAYVDTCSEEEFKKMKETRNFSLPCFNRSKPVEYNLELWEKMLERKFKEGEA 242


>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 910

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 125/390 (32%), Gaps = 73/390 (18%)

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--DL-----KALNIQHDIFISEDDFH 266
            D + SELL   +        ++    +  +IRD  D      +   +   +F +E+   
Sbjct: 416 VDAFRSELLEAVD--NTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIPVFYAENGEA 473

Query: 267 RGDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             D   I  +      +G            + EG   P         +MD   + F S  
Sbjct: 474 ILDIELIEHVAKIFEEEGSNVWFYKDAKELLPEGYTHPGSPNGEFTKEMDIMDVWFDSGT 533

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAV 374
                      S         DL Y            +Y+ GSD   G+       + AV
Sbjct: 534 -----------SHQGCCAIREDLTYPAD---------LYLEGSDQYRGWFNSSLITSVAV 573

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           S       ++    V    DG   KMSK  G+ I+   V  E+G++ +R        ++ 
Sbjct: 574 SGVAPYKELVSAGFVM---DGNGNKMSKSLGNVISPNDVGKELGAEIIRLWSASVDYTQD 630

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +      +K+ S+          Y + R+ FR       +  F+     V  +  E    
Sbjct: 631 VRISKDILKQVSE---------TYRKIRNTFRFLLGNLFNGSFNNKTDLVAYENLEELDK 681

Query: 495 ELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYDLASVFH----GHWSHGRENPRLRF 547
                  + ++ +V+          +   +     +L + F+      +        + +
Sbjct: 682 -----YMVLKFEKVVAKVLDYYENYQFNSITT---ELINFFNVELSSFY--LDYGKDILY 731

Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNII 577
           ++  +      RL ++  + ++++  + ++
Sbjct: 732 IEGEDSHK---RLSMLTVLYTVLSKSVRLL 758


>gi|326204991|ref|ZP_08194842.1| glutamyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325984857|gb|EGD45702.1| glutamyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 489

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 33/288 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ-INTLALSVFWRYQQ 187
           + +PTG MH+G+ R A+    +A    ++G  + R   I D   +     A+ V ++  +
Sbjct: 9   APSPTGYMHIGNLRTALYEYLIAR--KYNGKFILR---IEDTDQERFVEGAVDVIYKTLK 63

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
               +  + P+ G   G Y++   + +  +Y+ +L+                       +
Sbjct: 64  LAGISHDEGPDVGGNYGPYVQSERRGMYLEYAKKLVELGGA------------YYCFCTK 111

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + L  L  + D       + R   S  ++ I+   +    Y      P + TT   D   
Sbjct: 112 ERLAELKEKQDAEGHGHRYDRCCLSLSKEEIEENLKNNVPYVIRQKMPDTGTTSFEDAVY 171

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +   ++ +    D+ L+K+DG  TY   + A     ++    ++  V G+++     +
Sbjct: 172 GTITVDNSELD---DQILIKTDGLPTY---NFANVIDDHQMEISHV--VRGNEYLSSTPK 223

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
              +  A         +     V L       K+SKRAGD  +   +V
Sbjct: 224 YNLLYEAFGWD-----IPTYVHVPLILKASGQKLSKRAGD-PSFEDLV 265


>gi|317499441|ref|ZP_07957708.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893313|gb|EFV15528.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 124/395 (31%), Gaps = 58/395 (14%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    ++ D++A      GY+V  +   ++ G ++   A       ++ + + 
Sbjct: 16  SGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAEEKGVTPKEFVDDV 75

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             ++         +  +     D++        E++   I K    Q    I + + + L
Sbjct: 76  AGEIK-------RIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQG--DIYKGEYEGL 126

Query: 253 NIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGILPPPK 295
                + F +E     G                    +    D L      +   + P  
Sbjct: 127 YCTPCESFFTESQLVDGKCPDCGRPVQPAKEEAYFLKLSKYADRLIEHINTHPEFIQPES 186

Query: 296 SK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY----- 340
            K            Q   + R    +   +  D+     +  D    Y    + Y     
Sbjct: 187 RKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITG-IGYDCDGN 245

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
              K+ + +   ++++G D    + R   +      ++        +      L  DG  
Sbjct: 246 SSDKFNKFWPADLHLIGKD----IIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDG-- 299

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQY 456
            KMSK  G+ +    +VD  G D+VR+ +L            +  + E+   +    +  
Sbjct: 300 -KMSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILGN 358

Query: 457 AYARCRSIFRQA-----KDIFPDLDFDLFPRNVIP 486
              R  S+  +      +D     D+D   + V+ 
Sbjct: 359 LVNRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVT 393


>gi|153954081|ref|YP_001394846.1| glutamyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854694|ref|YP_002471816.1| hypothetical protein CKR_1351 [Clostridium kluyveri NBRC 12016]
 gi|187470986|sp|A5N867|SYE_CLOK5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|146346962|gb|EDK33498.1| GluS [Clostridium kluyveri DSM 555]
 gi|219568418|dbj|BAH06402.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 487

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 116/326 (35%), Gaps = 39/326 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A      G +        D    +      ++   +  
Sbjct: 9   APSPTGYMHVGNLRTALYTYLIA---KHDGGDFILRIEDTDQERFVEGALDIIYHTLEIT 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D     G   G Y++    ++  +Y+ EL++  +  +        + ++     + 
Sbjct: 66  GLKHDEGPDIGGPVGPYIQSQRTDIYLEYAKELIDKGK-AYYCFCTKERMDSLKNKDDE- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
                        E +F++ D   ++   + +  +      Y      P+S  T   D  
Sbjct: 124 -------------EKEFYKYDKHCLKLSKEEINEKLASNIPYVIRQNNPESGFTTFHDEI 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS++     
Sbjct: 171 YGDI---SVDNSELDDMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGSEYLSSAP 222

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVR 423
           +   +  A   +     V +             K+SKR GD  + + ++++  +    + 
Sbjct: 223 KYNRLYDAFGWE-----VPIYIHCPPIMKDAHQKLSKRNGDA-SFQDLIEKGYLKEAVLN 276

Query: 424 FMMLWRKN--SELLDFDFCKVKEQSK 447
           ++ L   N  +E   FD  ++ E   
Sbjct: 277 YIALLGWNPGNEKEIFDLDELVELFN 302


>gi|117621368|ref|YP_858156.1| valyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562775|gb|ABK39723.1| valyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 971

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             + + + + L     +   +  +         I     N TG +H+GH     + DTL 
Sbjct: 25  TFNHNAIEQALYQHWEAQGYFKPHGDTSKDSFCIMIPPPNVTGSLHMGHAFQQTLMDTLI 84

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 85  RYNRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 113

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 114 KIAAEEGKTRHDYGREAFIDKIWQWKEESGGTITRQ-MRRLGDSVDWERERFTMDEGLSA 172

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L   G +Y G               D +
Sbjct: 173 AVQEVFVRLYEDGLMYRGKRLVNWDPKLNTAISDLE 208


>gi|294782701|ref|ZP_06748027.1| glutamate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481342|gb|EFG29117.1| glutamate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 510

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 99/295 (33%), Gaps = 46/295 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIND 169
              K     V+ +PTG  HVG    A+          GD +  +      +  R  Y   
Sbjct: 4   DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNNGDFILRI-----EDTDRNRYT-- 56

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            G++   +  ++ W         D     G   G Y +    +L  KY+ EL+      +
Sbjct: 57  EGSE-QMIFDALKWLDLDYAEGPDV----GGEYGPYRQSERFDLYGKYAKELVEKGG-AY 110

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   ++ + +  +     L   +D             S  ++ I+   + G  Y  
Sbjct: 111 YCFCDQERLENLRERQKAM--GLPPGYDGHC---------RSLTKEEIEEKLKAGVPYVI 159

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  G 
Sbjct: 160 RLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGFPTYH---LANIVDDHLMGI 213

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 214 THVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 261


>gi|256848351|ref|ZP_05553794.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714949|gb|EEU29927.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 674

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 111/342 (32%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A     +GY+V   +Y+   G              +  L  
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFKRLTGYDV---FYL--TGT------------DEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +   +   +  + L+   +K++    DY  +A+ KI +  L  
Sbjct: 60  EQKAEQLGMKPQEYVDQMATGIKKLW--KTLDITNDKFIRTTDDYHERAVQKIFQQLLDQ 117

Query: 252 LNIQ---HDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I    +  + S DD      S + ++  +   +   G    G       + +    M 
Sbjct: 118 GDIYKGKYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVEEESYFFKMS 177

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDNMIY 354
           +                +   R     +        DLA  +  +  G        +++Y
Sbjct: 178 KYADWLMDYYKEHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVY 237

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V              GSD +   K+   A    V ++  + + +   ++           
Sbjct: 238 VWIDALSNYITALGYGSDDNRLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKH 297

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I  + +V+  G D+ R+ +L 
Sbjct: 298 VIGHGWLTMKDGKMSKSKGNVIYPQTLVERYGLDATRYYLLR 339


>gi|153811133|ref|ZP_01963801.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
 gi|149832631|gb|EDM87715.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
          Length = 652

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 110/364 (30%), Gaps = 53/364 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MDKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ + N   ++         +  +     DK+        E++   I K   
Sbjct: 61  AEEAGITPKEFVDNVSGEIK-------RIWDLMNTSYDKFIRTTDADHEKQVQKIFKK-- 111

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNL 280
           + A   I +   + +     + F +E     G                    +    D L
Sbjct: 112 MYAKGDIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPCVPAKEEAYFFKMSKYADRL 171

Query: 281 ARQGYVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                 +   + P   K            Q   + R    +   +  D      +  D  
Sbjct: 172 IDYINTHPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDAL 231

Query: 331 YTYFAADLAYFKCKYE-RGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQIN 382
             Y    + Y         F+ +    ++++G D    + R   +      +S       
Sbjct: 232 TNYITG-IGYDCDGESSEQFNKLWPADLHLIGKD----IIRFHTIYWPIFLMSLDLPLPK 286

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
            +      L  DG   KMSK  G+ I    +VD  G D+VR+ +L            +  
Sbjct: 287 QVFGHPWLLQGDG---KMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWEL 343

Query: 442 VKEQ 445
           + E+
Sbjct: 344 MVER 347


>gi|50307489|ref|XP_453724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642858|emb|CAH00820.1| KLLA0D14971p [Kluyveromyces lactis]
          Length = 1091

 Score = 48.4 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 92/360 (25%), Gaps = 80/360 (22%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGT-----KVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +P+ +             +       G         I     N TG +H+GH     + D
Sbjct: 136 NPANVESSWYEWWNKSGFFEPEFTKDGKIKPEGVFTIPAPPPNVTGSLHIGHALTIAIQD 195

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           +L       G  V      + AG    ++     W  ++   ++        Y       
Sbjct: 196 SLCRYYRMKGKTVLFLPGFDHAGIATQSVVEKQIWASEKKTRHD--------YGREEFVD 247

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              E  ++Y                         K I++ +K L   +D           
Sbjct: 248 KVWEWKEEYH------------------------KKIKNQVKKLGASYDWSREAFTLDPK 283

Query: 269 DPSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
               + +    L  +G +Y           L    S    +    + + L       + V
Sbjct: 284 LSKAVVEAFVKLHEEGIIYRAARLVNWSVKLNTAISNLEVENKDIKGKTLLSVPGYDEKV 343

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV------KRLEAVAAAV 374
           +  +L S   ++Y                     V+GSD    V            A A+
Sbjct: 344 EFGVLTS---FSYP--------------------VVGSDEKLIVATTRPETMFGDTAVAI 380

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                +   L    V+     +  KM            V  E G+ +V+      +N   
Sbjct: 381 HPDDERYKHLHGHFVQHPF--LNRKM----PIVCDAEAVDMEFGTGAVKITPAHDQNDYN 434


>gi|330836390|ref|YP_004411031.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748293|gb|AEC01649.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 879

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 37/219 (16%)

Query: 93  LSPSYLR----KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +   +      + + ++  S  E+           ++     N TG +H+GH     + D
Sbjct: 1   MDSQFWHKECEEKIYTMWRSKKEFSPQYDKLKETFSMVMPPPNVTGILHMGHALNNSLQD 60

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +              Y+            ++V W          +D        V  + 
Sbjct: 61  VIVR------------YH--------RMKGMAVLWL-------PGTDHAGIATQNVVERQ 93

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +  E   ++      F E  WL        +    II+  L+ +    D          G
Sbjct: 94  LNNEGLGRHDIGREKFLERTWLVK------ENHHNIIKSQLEKMGCSCDWEHERFTMDEG 147

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               +R+    L  +G +Y+G               D +
Sbjct: 148 ASRAVREAFVTLYEKGLIYKGKYLVNYCYKCGTALSDDE 186


>gi|257058592|ref|YP_003136480.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588758|gb|ACU99644.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 909

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 50/196 (25%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P            +   +  +    GT  +I     N TG +H+GH     + D L   
Sbjct: 13  DPKTTEAKWQEAWETHQVFKADTNHPGTPYSIVIPPPNVTGSLHMGHAFEDCLMDVLVRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+                                    LP   +  + +  +    
Sbjct: 73  HRMCGHNTLC--------------------------------LPGTDHASIAVHTILDRQ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L     +  ++    I + LK + +  D          G    +
Sbjct: 101 LKAEGKTRYDIGREKFLEKAWQWKEESG-GTIVNQLKRMGLSADWSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 160 RKAFIQLYEAGLIYRG 175


>gi|313892624|ref|ZP_07826211.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119021|gb|EFR42226.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 883

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 61/235 (25%), Gaps = 33/235 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L         +           +I     N TG +H+GH     + D L   
Sbjct: 11  NPGEIEGKLYEFWEKNNVFHDEPDSSKEPYSIVLPPPNVTGQLHMGHALDGTLQDILIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY V                           ++    D           K + KE 
Sbjct: 71  KRMQGYNV---------------------------MWLPGKDHAGIATQVKVEKQIAKEG 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             KY      F E  W    K+     + K IR     L    D               +
Sbjct: 104 LTKYDLGREKFLERVWQ--WKEKYGNTIGKQIR----KLGSSCDWTRERFTMDDVCAKAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           R++   L  +G +Y G          Q    D +            V+ P++ SD
Sbjct: 158 REVFIALYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLYYVNYPIVGSD 212



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 26/172 (15%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+   +        +      + E   +   +      L RD    KMSK  G+
Sbjct: 485 TGYD-IIFFWVAR------MMFMSMEFMHEIPFKYVFIHG----LVRDSQGRKMSKSLGN 533

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    V+++ G+D++RF ++        + F + +V    + N  F  +          
Sbjct: 534 GIDPLEVIEKYGADALRFTLVTGNTPGNDMRFYYERV----EGNRNFANKL--------- 580

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
                 F  ++ D + +N  P+E ++  ++  ++  LA+    +       E
Sbjct: 581 -WNATKFTLMNLDNYDKNFTPEEKDYTLADKWILEKLAKTEEFVSRNLDKYE 631


>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Clostridium difficile]
          Length = 465

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 126/431 (29%), Gaps = 101/431 (23%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  ++ DTL   + + GY+VT   Y+                  Q 
Sbjct: 27  CGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVT---YV------------------QN 65

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +D  +   +  G+  + V  +   +Y  +            +K  +V   +     
Sbjct: 66  FTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLG-------IKRATVHPQVTD--- 115

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGILPPPKSK 297
                                +   I + I  L  +GY Y                 K  
Sbjct: 116 ---------------------NIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLS 154

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAA----DLAYFK---CKYERG 348
             ++ D++    +  +      +D  L   K +G   + +        +        +R 
Sbjct: 155 GQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRY 214

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I +            E   A    +  +       +   Y +    KMSK  G+F 
Sbjct: 215 LGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKYW-MHNGYININDEKMSKSKGNFF 273

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VRF ML       ++F   ++  Q+K                   + 
Sbjct: 274 TVRDISKLYDLEIVRFFMLSAHYRNPVNFS-DEMLNQAKAG---------------LERL 317

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAF 523
            +    L+F L        ES     E++L+  L ++ +   +A             +  
Sbjct: 318 YNTKEKLEFTLSNL----VESPLTEKEVELVKELDDFRQKFIDAMDDDVNTADAVSVI-- 371

Query: 524 YLYDLASVFHG 534
             ++LA + + 
Sbjct: 372 --FELAKLINS 380


>gi|222530218|ref|YP_002574100.1| glutamyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222457065|gb|ACM61327.1| glutamyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 485

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 92/285 (32%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYAGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L       +      Y  +  +
Sbjct: 63  WLGIEW----DEGVEVGGPYGPYRSTERVDIYKKYVDVLFEKGYAYYC-----YCTEEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R +L +   Q   ++ +        +   +      ++G         P+       
Sbjct: 114 EAQRQELLSKG-QMPRYLGKC------RNLTEEQKRRFEQEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGDVEFLSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+     Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALGFGLPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|213401899|ref|XP_002171722.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999769|gb|EEB05429.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 982

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 51/194 (26%), Gaps = 36/194 (18%)

Query: 100 KILSSIVVSGIEYGRNL----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
                 V SG           I K  K  I     N TG +H+GH     + D+LA    
Sbjct: 108 AWYDWWVKSGFFEPEFEADGSIKKAGKFVITSPPPNVTGALHIGHALTIAIQDSLARWNR 167

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G       ++       +   LS     ++ L+         Y    +LK V     D
Sbjct: 168 MKG---KTVLFLGG----FDHAGLSTQSVVEKKLWQEKKQTRHDYSREDFLKIVWAWKED 220

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            ++                          I+  +  L    D               +R+
Sbjct: 221 YHNR-------------------------IKTQMSRLGGSFDWTREAFTMDENLSRAVRE 255

Query: 276 IIDNLARQGYVYEG 289
               L  +G +Y  
Sbjct: 256 TFVRLHEEGIIYRA 269


>gi|169833404|ref|YP_001695432.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688313|sp|B1I9D7|SYE_STRPI RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|168995906|gb|ACA36518.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 486

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 100/294 (34%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL           K Y  +
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLLAEG-----KAYKSYVTE 109

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKT 298
             +   R+  + +  +   +I+E   + G     +   I      G +    L   +S  
Sbjct: 110 EELVAERER-QEVAGETPRYINE---YLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWIIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|293364683|ref|ZP_06611404.1| glutamate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702939|ref|ZP_07639887.1| glutamyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316941|gb|EFE57373.1| glutamate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623619|gb|EFO02608.1| glutamyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 486

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|218245548|ref|YP_002370919.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166026|gb|ACK64763.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 909

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 50/196 (25%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P            +   +  +    GT  +I     N TG +H+GH     + D L   
Sbjct: 13  DPKTTEAKWQEAWETHQVFKADTNHPGTPYSIVIPPPNVTGSLHMGHAFEDCLMDVLMRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+                                    LP   +  + +  +    
Sbjct: 73  HRMCGHNTLC--------------------------------LPGTDHASIAVHTILDRQ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L     +  ++    I + LK + +  D          G    +
Sbjct: 101 LKAEGKTRYDMGREKFLEKAWQWKEESG-GTIVNQLKRMGLSADWSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 160 RKAFIQLYEAGLIYRG 175


>gi|26987713|ref|NP_743138.1| valyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81442021|sp|Q88P76|SYV_PSEPK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24982401|gb|AAN66602.1|AE016288_1 valyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 948

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L                               V ++L 
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQML-------------------------------VERQLE 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  AK-GQNRHDLGREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|295693491|ref|YP_003602101.1| leucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031597|emb|CBL51076.1| Leucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 804

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 70/205 (34%), Gaps = 44/205 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         +LY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQKLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
            ++ +L      Y   ++  +   E
Sbjct: 648 KNDGELDKV---YAETVKKVSEDFE 669


>gi|149911069|ref|ZP_01899697.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805895|gb|EDM65883.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 939

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLA 339
           R   + E +    + K  Q         L     V      D   +  D   T+F+   A
Sbjct: 490 RSAELMEDVAKLVEQKGIQAWWDLDPADLLGDDAVNYTKAPDTVDVWFDSGSTHFSVVDA 549

Query: 340 YFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               K   G +  +Y+ GSD   G+ +    ++ A+  K     VL    V    D    
Sbjct: 550 ---RKEYAGAEIDLYLEGSDQHRGWFQSSLMISTAIHGKAPYKEVLTHGFVV---DAKGR 603

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +  + V++ +G D +R+ +     +  +     ++ ++S +        AY
Sbjct: 604 KMSKSIGNVMAPQDVMNRLGGDVLRWWVASTDYTGEMTVS-DEILDRSAD--------AY 654

Query: 459 ARCRSIFR 466
            R R+  R
Sbjct: 655 RRIRNTAR 662


>gi|120437508|ref|YP_863194.1| isoleucyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579658|emb|CAL68127.1| isoleucyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 1134

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 83/230 (36%), Gaps = 29/230 (12%)

Query: 260 ISEDDFHRG-DPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           + E D   G +P  +  +  D +     V + I     S    K + D   + F S  + 
Sbjct: 556 VLEKDIFEGFEPGDMSEENYDKVDLHKNVVDTITLVSDSGKPMKREADLIDVWFDSGSMP 615

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                        + Y   +    + K+ R  D +    G D   G+   L A+A  + +
Sbjct: 616 YS----------QWHYPFENKEKVEDKW-RKADFIAE--GVDQTRGWFYTLHAIATMIFD 662

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELL 435
             A  NV+   LV    D    KMSKR G+       +   G D+ R+ M+   N  + L
Sbjct: 663 DVAYKNVVSNGLV---LDKNGQKMSKRLGNAADPFETISVYGPDATRWYMIANANPWDNL 719

Query: 436 DFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ--AKDIFPDLD 476
            FD   + E  ++          F++ YA     S      A +  P++D
Sbjct: 720 KFDIEGIGEVQRKFFGTLYNTYSFFILYANIDEFSYAEDDVALEKRPEID 769


>gi|90417681|ref|ZP_01225593.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337353|gb|EAS51004.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 515

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 97/334 (29%), Gaps = 55/334 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D LA      GY+V      ++ G ++   A        +    
Sbjct: 14  PNGRPHIGHAYEFIATDALARFKRLDGYDVFFLTGTDEHGIKMLQSAREQGISPAELARR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEK---------WLPIVKDYS 237
           N ++        G     +++           +                  W  +  +  
Sbjct: 74  NSAEFEAMAALLGGTNDDFIRTSEDRHVAASQAIWTKMAAAGDVYKDAYSGWYSVRDEAY 133

Query: 238 VQAMMKIIRDDLKALNIQ-----------HDIFISEDD-----FHRGDPSPIRDIIDNLA 281
                  +R+D K    Q           +   +SE        +  +P  I        
Sbjct: 134 YGEDETELREDGKRYGPQGSPVEWVAEESYFFKLSEFQDRLLALYEDNPDFIGPAERRNE 193

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
              +V  G+     S+TT    +          + GD+     +  D    Y  A    F
Sbjct: 194 VMSFVRSGLRDLSISRTTFDWGIP---------VPGDEKHVMYVWVDALTNYLTA--TGF 242

Query: 342 KCKYERGFDN--MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             + ER       ++V+G D    H+ Y     A   +      +       L       
Sbjct: 243 PEEGERSAYWPADLHVIGKDIVRFHTVY---WPAFLMSAGLPVPRRVYAHGFLFN----- 294

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ I    +VD  G D +R+ +L  
Sbjct: 295 RGEKMSKSVGNVIDPAALVDVYGLDRLRYFLLRE 328


>gi|20807410|ref|NP_622581.1| glutamyl- and glutaminyl-tRNA synthetase [Thermoanaerobacter
           tengcongensis MB4]
 gi|30173180|sp|Q8RB93|SYE1_THETN RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|20515931|gb|AAM24185.1| Glutamyl- and glutaminyl-tRNA synthetases [Thermoanaerobacter
           tengcongensis MB4]
          Length = 481

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 93/284 (32%), Gaps = 38/284 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +      ++D    +            + 
Sbjct: 10  APSPTGSLHIGGARTALFNWLFAR---HHGGKFILR--VDD--TDLERSTEESMRGILEG 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  EG            +  D+Y        EE        +  +  ++ +R  
Sbjct: 63  LQWLGIDWDEGPI-------YQSQRLDEYRKFANKLLEEGKAYYC--FCTKEELEEMRKQ 113

Query: 249 LKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +               + G   +  ++ I+N  ++G      L  P+   T   D+ R 
Sbjct: 114 AEREGRPF--------MYTGKCRNLTKEQIENYLKEGKKPVIRLKTPREGKTVVHDIIRG 165

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F ++ + D +   ++KSDG  TY   + A     Y+ G  ++I     +H     + 
Sbjct: 166 DVEFDNSTIDDFI---IMKSDGMPTY---NFATVVDDYQMGITHIIR--AEEHLSNTPKQ 217

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             +  A+     Q        V +       K+SKR G      
Sbjct: 218 ILIYEALGVPLPQFAH-----VSMVLAPDRTKLSKRHGATSVQE 256


>gi|325278213|ref|ZP_08143706.1| valyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324096653|gb|EGB95006.1| valyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 948

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L                               V ++L 
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQML-------------------------------VERQLE 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  AK-GQNRHDLGREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|312881896|ref|ZP_07741659.1| isoleucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370414|gb|EFP97903.1| isoleucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 625

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 38/303 (12%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +     + H      I ++   + 
Sbjct: 130 EWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIENVAKLVE 189

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++G           +K     D ++ + +  +  V  D         G   +   D    
Sbjct: 190 QKGI---QAWWDLDTKELLGSDAEQYEKVLDTLDVWFDS--------GVTHFSVVD---- 234

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             K   G    +Y+ GSD   G+ +     + A+ ++     VL    V    DG   KM
Sbjct: 235 ARKEYEGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGHGRKM 291

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +        AY R
Sbjct: 292 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRR 342

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R       +L+      +++P E         +   L+    ++  A      + 
Sbjct: 343 IRNTAR---FFLANLNGFNPATDIVPVEEMVALDRWAVGRALSAQNEIV-KAYGDYNTHA 398

Query: 521 LAF 523
           +  
Sbjct: 399 VTQ 401


>gi|224024452|ref|ZP_03642818.1| hypothetical protein BACCOPRO_01177 [Bacteroides coprophilus DSM
           18228]
 gi|224017674|gb|EEF75686.1| hypothetical protein BACCOPRO_01177 [Bacteroides coprophilus DSM
           18228]
          Length = 1162

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 25/180 (13%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + GSD +R+ M+   +  + L FD   V E + K     Y  Y++            ++ 
Sbjct: 727 KFGSDPLRWYMITNSSPWDNLKFDVDGVDEVRRKFFGTLYNTYSFF----------ALYA 776

Query: 474 DLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPRVIENATIAQEPYK----LAFYLYD 527
           ++D   +    +P E   E D   L L+  L +    ++      EP K    +  ++ D
Sbjct: 777 NVDGFTYAEADVPMEERPEIDRWILSLLNSLIQ---EVDACYNDYEPTKAGRAITDFVND 833


>gi|188997007|ref|YP_001931258.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|259511518|sp|B2V9T1|SYI_SULSY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188932074|gb|ACD66704.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 939

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 58/315 (18%), Positives = 110/315 (34%), Gaps = 70/315 (22%)

Query: 227 EKWLPIVKDYSV-QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
           E    IVKD  V + +  +I++D    +I  +  + E                       
Sbjct: 473 ENCGEIVKDMEVFEHVANLIKNDEFGADIWFEKLVKE----------------------L 510

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           + EG           K + D   + F S +                   AA L Y + + 
Sbjct: 511 LPEGYKCKKCGGQEFKKEEDILDVWFDSGVS-----------------HAAVLKYGEWEE 553

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R   +M Y+ GSD      +   + +  S  +A  + +L     L   G   KMSK AG
Sbjct: 554 LRWPADM-YLEGSDQHRGWFQSSLLESVASYNRAPYDTVLTHGFTLDEKGR--KMSKSAG 610

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + +    V+ E G+D +R  ++    +E +   F  +K  +++         Y + R+ F
Sbjct: 611 NVVAPEKVIKEYGADILRLWVVTEDYTEDIKIGFNLIKRIAED---------YRKIRNTF 661

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R       D + +   ++ +P E+  +         L++   +I+ A  + E        
Sbjct: 662 RYFLGNLYDFNPN---QDYVPYENLLEIDRW----MLSKLQNIIQIADKSYE-------- 706

Query: 526 YDLASVFHGHWSHGR 540
            +    FH  +   +
Sbjct: 707 -E--GKFHKIYHTIK 718


>gi|330838350|ref|YP_004412930.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746114|gb|AEB99470.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 886

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 52/196 (26%), Gaps = 33/196 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P    K           +           +I     N TG +H+GH     + D L    
Sbjct: 12  PQSFEKRWYEFWEKNDLFHAEPEEGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWR 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY                                    +P   + G+  +   +   
Sbjct: 72  RMQGYNTL--------------------------------WMPGCDHAGIATQAKVEAAL 99

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               +       EK+   V  +  +   +I+   L+ L    D          G    +R
Sbjct: 100 RAEGTNRYELGREKFTERVWQWKEEYGSRIMYQ-LRTLGSSCDWARERFTMDEGCSHAVR 158

Query: 275 DIIDNLARQGYVYEGI 290
           ++  +L  +G +Y+G 
Sbjct: 159 EVFVSLYEKGLIYQGT 174



 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +     +     +V +  LV   RD    KMSK  G+
Sbjct: 485 TGYD-IIFFW-------VARMVMMGLEFGKDIPFHHVFIHGLV---RDSEGRKMSKSLGN 533

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
            I    V+D+ G+D++RFM++        + F + +V+    
Sbjct: 534 GIDPVEVIDKYGADTLRFMLITGNTPGNDMRFYWERVEAARN 575


>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 488

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 122/377 (32%), Gaps = 61/377 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +   V +          +H+G+ R     D +   + + GY   R +Y+           
Sbjct: 23  EPGVVRLYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGY---RVHYV----------- 68

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIVKDY 236
                  +     +D  +   +  G     +       +  +   L+  E    P V ++
Sbjct: 69  -------RNYTDVDDKIIKAAHETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEH 121

Query: 237 SVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +  +++II + L A  + +    D++ S   +        +  +D+L        G   
Sbjct: 122 -LPEILRII-ETLVAKGVAYESQGDVYFSVSSYPEY-AKLSKRKLDDL------CAGERV 172

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD-- 350
            P  +  +  D     L   +       D P  K  G   +     A         FD  
Sbjct: 173 QPGEQKREPLDF---ALWKAAKPGEPSWDSPWGK--GRPGWHIECSAMSAKYLGESFDIH 227

Query: 351 -NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
              + ++   H   + + EA +    +  A+  +    L     D    KMSK  G+ + 
Sbjct: 228 GGALDLIFPHHENEIAQSEAAS---GKPFAKYWMHCGFL-----DIEGAKMSKSLGNVVR 279

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           LR  +  V ++++RF  L       L F   K    S+    + ++Y Y       R+  
Sbjct: 280 LRDALTRVDAEALRFFFLSTHYRHPLHFS-DKAIADSE----YRLEYFYET----LRKVD 330

Query: 470 DIFPDLDFDLFPRNVIP 486
           +     DF   P +  P
Sbjct: 331 ERVGGKDFGQGPLHGEP 347


>gi|296329539|ref|ZP_06872025.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672736|ref|YP_003864407.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153282|gb|EFG94145.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305410979|gb|ADM36097.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 664

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A             
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEQ----------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     ++   +    L    + ++   +      + K+ +  L  
Sbjct: 66  ------ENITPQEYVDRAAADIQKLWKQ--LEISNDDFIRTTEKRHKVVIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   I             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDIERNEKGEV---IGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR   +G   DR L   + + T+                    DLA  +  ++ G     
Sbjct: 175 FR---MGKYADRLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPE 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|291538485|emb|CBL11596.1| glutamyl-tRNA synthetase, bacterial family [Roseburia intestinalis
           XB6B4]
          Length = 483

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 68/409 (16%), Positives = 146/409 (35%), Gaps = 76/409 (18%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E ++         + +
Sbjct: 9   APSPTGRMHVGNLRSALYEFLIAKHAGGDFMLRI-----EDTDQERFVE------GAVDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G Y G Y++    +  +  KY+ EL+   E  +        
Sbjct: 58  IYHTLEETGLVHDEGPDKDGGY-GPYVQSERMKTGIYMKYAKELVEKGE-AYYCFCDKER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++++   +      +  +H + +S            ++ ++     G  +      P   
Sbjct: 116 LESLKTEVDGKEIMMYDKHCLHLS------------KEEVEANLAAGKPFVIRQNIPNEG 163

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT   D     +   +  +    D  L+KSDG  TY   + A     +     ++  V G
Sbjct: 164 TTTFHDELYGDITVDNAELD---DMILIKSDGYPTY---NFANVVDDHTMNITHV--VRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +++     + + +  A   +       +   + L  D    K+SKR+G   +   ++++ 
Sbjct: 216 NEYLSSSPKYQRLYDAFGWESP-----VYIHLPLITDENHKKLSKRSGHS-SFEDLLEQG 269

Query: 417 -VGSDSVRFMMLW----RKNSELLDFDFCKVKEQS----KENPVFYVQYAYARCRSIFRQ 467
            +    V ++ L       N E+   D   +KE       ++P  +  Y   +  +    
Sbjct: 270 FLSEAVVNYISLLGWSPEDNREIFTLD-ELIKEFDYHRISKSPAVF-DYTKLKWMN---- 323

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
             +    +DFD F     P   E  T +L L   +A         +P +
Sbjct: 324 -GEYIKAMDFDSFYEKAEPYIREVITKDLDL-KKIAAMVKTRIEVFPDI 370


>gi|312115925|ref|YP_004013521.1| glutamyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311221054|gb|ADP72422.1| glutamyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 525

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 96/321 (29%), Gaps = 52/321 (16%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  +   + +PTG +H+G  R A+     A     +G          D     +  
Sbjct: 1   MASASGVVTRFAPSPTGFLHIGGARTALFNWLYA---KHTGGRFLLRIEDTDRARSTDAA 57

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----------KYSSELLNFPE 226
             ++    Q    + + +    +      K V   L +           +         +
Sbjct: 58  IAAILDGLQWLGLDWEGEPVFQFARAERHKEVAYRLLESGNAYRCYSTPEELEAYRAEAD 117

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQG 284
                +       A  + I     AL  +  +F S   +  G   P  D   +  L    
Sbjct: 118 AARKALSDAKKASASAEEIARLEAALAAKPRVFSSP--YRDGKTPPAADAPFVIRLKA-- 173

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
                   P + +T  + ++  +          D  D  LL+SDG+ TY    LA     
Sbjct: 174 --------PREGETVVEDEVQGRVRW----ANKDLDDMVLLRSDGTPTYM---LAVVVDD 218

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           ++ G  ++I   G DH     R + +  A+              + L       K+SKR 
Sbjct: 219 HDMGITHVIR--GDDHLTNAARQKQIYNAMGWDVPTFAH-----IPLIHGPDGAKLSKRH 271

Query: 405 GDFITLRHVVDEVGSDSVRFM 425
           G           +G D+ R M
Sbjct: 272 G----------ALGVDAYRAM 282


>gi|283469822|emb|CAQ49033.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 466

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGATIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|260888326|ref|ZP_05899589.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861862|gb|EEX76362.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 892

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 52/196 (26%), Gaps = 33/196 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P    K           +           +I     N TG +H+GH     + D L    
Sbjct: 18  PQSFEKRWYEFWEKNDLFHAEPEEGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWR 77

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY                                    +P   + G+  +   +   
Sbjct: 78  RMQGYNTL--------------------------------WMPGCDHAGIATQAKVEAAL 105

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               +       EK+   V  +  +   +I+   L+ L    D          G    +R
Sbjct: 106 RAEGTNRYELGREKFTERVWQWKEEYGSRIMYQ-LRTLGSSCDWARERFTMDEGCSHAVR 164

Query: 275 DIIDNLARQGYVYEGI 290
           ++  +L  +G +Y+G 
Sbjct: 165 EVFVSLYEKGLIYQGT 180



 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +     +     +V +  LV   RD    KMSK  G+
Sbjct: 491 TGYD-IIFFW-------VARMVMMGLEFGKDIPFHHVFIHGLV---RDSEGRKMSKSLGN 539

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
            I    V+D+ G+D++RFM++        + F + +V+    
Sbjct: 540 GIDPVEVIDKYGADTLRFMLITGNTPGNDMRFYWERVEAARN 581


>gi|237743264|ref|ZP_04573745.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433043|gb|EEO43255.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 887

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 79/267 (29%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G         + AG         +  + +      +  L +          +  + 
Sbjct: 69  NRMTGKNTLWMPGCDHAG---------IATQNKVERKLAEDGLKKEDIGREKFIEMTWDW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II   L+ L    D          G    +
Sbjct: 120 KEKYG------------------------GIITRQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R I ++L   G +Y+G                 +   +++   L++      + D  ++ 
Sbjct: 156 RKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHVEKDGHLWQIKYPVKNSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +        AD+A      +  + ++I
Sbjct: 216 ATSRPETMLADVAVAVHPEDERYKHLI 242



 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|163760146|ref|ZP_02167229.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282545|gb|EDQ32833.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 514

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 96/321 (29%), Gaps = 29/321 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA      G +V      ++ G ++   A     +       
Sbjct: 15  PNGVPHIGHAYTAIATDVLARFQRLDGKDVFFLSGTDEHGQKMQQTAEQEGIKPIALADK 74

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-----QAM 241
           N +   +           +++   +                  + + K         +A 
Sbjct: 75  NSAVFRDMLERLDCSNDDFIRTTEERHKASVQELWKRMEANGDIYLGKYGGWYSVRQEAY 134

Query: 242 MKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
                  L    I+ +       ++ E+ ++    +    +++   +             
Sbjct: 135 FDEGETTLGEDGIRREPLGSPVEWVEEESYYFRLSAYGDKLLELFEKNPEFVAPAERRNE 194

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           +        +   + R    +   + G+D     +  D    Y  A  A F  +    ++
Sbjct: 195 VASFVKSGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITA--AGFPDETSEKWN 252

Query: 351 --NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I+++G D    + R  AV        A + +        +      KMSK  G+ +
Sbjct: 253 YWPAIHMIGKD----IVRFHAVYWPAFLMSAGLELPAKVFAHGFLLVKGEKMSKSIGNVV 308

Query: 409 TLRHVVDEVGSDSVRFMMLWR 429
               ++D  G D VR+  +  
Sbjct: 309 DPFALIDHYGLDQVRYFFMRE 329


>gi|86152046|ref|ZP_01070258.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124355|ref|YP_004066359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85840831|gb|EAQ58081.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018077|gb|ADT66170.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 628

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 100/322 (31%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYER 347
           G+     ++T+    +   Q       + DD     +  D  + Y ++ D        + 
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIIYVWLDALFIYISSLDFQSKGENAKF 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              + ++++G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 248 WPAH-VHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + VVD  GS++ R+ +L  
Sbjct: 303 VKPKEVVDAYGSEAFRYFLLRE 324


>gi|148546258|ref|YP_001266360.1| valyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148510316|gb|ABQ77176.1| valyl-tRNA synthetase [Pseudomonas putida F1]
 gi|313497344|gb|ADR58710.1| ValS [Pseudomonas putida BIRD-1]
          Length = 948

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L                               V ++L 
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQML-------------------------------VERQLE 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  AK-GQNRHDLGREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|322381147|ref|ZP_08055150.1| glutamyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154723|gb|EFX46994.1| glutamyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 478

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 126/414 (30%), Gaps = 72/414 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA    F G  V R +   D    + +   +     +  
Sbjct: 4   APSPTGHLHIGGARTALFDYLLAR--RFGGQFVIR-FEDTDQTRHVESGVENQLNGLKWL 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIR 246
             + D  +  G   G Y +     L   +  +LL      E +    +  + +  M+   
Sbjct: 61  GLDWDESVDVGGPYGPYRQTERLHLYKPFVEQLLREGNAYECYCSETELEAERTEMEARG 120

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +          +   +   ++ +              G         P+ +     D  R
Sbjct: 121 ETPMYSGKCRHLTAEQKAQYQME--------------GRKPSIRFLVPRGRVIAFDDRVR 166

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + F S  +GD +   +++ DG  TY   + A     +    + +I   G +H     R
Sbjct: 167 GHVEFESDGIGDFI---IVRPDGIPTY---NFAVILDDHLMKINLVIR--GEEHLTNTPR 218

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG-------- 418
              +  A+     +        + L  +    KMSKR    I       E+G        
Sbjct: 219 QIMMYEALGLTVPEFAH-----LSLILNQDRKKMSKRDESIIQFAEQYKELGYLPEAVMN 273

Query: 419 ------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
                              + +R   L R       FD  K+   +     +Y++ A  +
Sbjct: 274 FIALLGWSPQGEEEIFTKEELIRQFDLDRVAKSPSVFDMDKLNWMNN----YYIKKADLK 329

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
                R A    P L         + +E +    +L     +A Y   +  A  
Sbjct: 330 -----RIAGLALPHLQKAGRLPEKLTEEQQKWAEDL-----IALYQEQLTYAAE 373


>gi|312143436|ref|YP_003994882.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904087|gb|ADQ14528.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 884

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 52/191 (27%), Gaps = 34/191 (17%)

Query: 100 KILSSIVVSGIEYGRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           K     + +     +     +    +I     N TG +H+GH     + D L       G
Sbjct: 16  KWYDFWLENDYFKPKEKSETEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y               +  +++   +    L +   +  E    G        E  ++Y 
Sbjct: 76  YRSL-------WLPGTDHASIATEVKVVDKLKDQGIEKDEIGREG--FLEKAWEWKEEYG 126

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           + + N                         LK +    D          G    + ++  
Sbjct: 127 NRITNQ------------------------LKKMGSSCDWSRERFTLDEGCSEAVEEVFI 162

Query: 279 NLARQGYVYEG 289
            L  +G +Y+G
Sbjct: 163 QLYNEGLIYQG 173



 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 34/222 (15%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     ++K   ++ +  L+   RD    KMSK  G+ I    VVD+ G+D++
Sbjct: 494 WVARMIFMGLKFQDEKPFSDIYIHGLI---RDAQGRKMSKSLGNGIDPLEVVDKYGADAL 550

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++        D  F + + ++  N          +  +  R       D D +   +
Sbjct: 551 RFTLITGNTPGN-DMRFREERLEASRNFA-------NKIWNASRFVLMNLEDFDLEALDK 602

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF--HGHWSHGR 540
           + + +       + +L   +AE    I++A       ++A  LYD    F  +       
Sbjct: 603 SDLKETLADKWMQSRLNTVIAE----IDDALEDYNFGEMASSLYD----FIWNEFCDWYI 654

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           E  + R  Q  +              A       + S L ++
Sbjct: 655 ELLKARLYQEEDPA--------AKLTAQYYALNTLESLLRLL 688


>gi|167768118|ref|ZP_02440171.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1]
 gi|167709642|gb|EDS20221.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1]
 gi|291559969|emb|CBL38769.1| methionyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 124/395 (31%), Gaps = 58/395 (14%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    ++ D++A      GY+V  +   ++ G ++   A       ++ + + 
Sbjct: 16  SGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAEEKGVTPKEFVDDV 75

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             ++         +  +     D++        E++   I K    Q    I + + + L
Sbjct: 76  AGEIK-------RIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQG--DIYKGEYEGL 126

Query: 253 NIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGILPPPK 295
                + F +E     G                    +    D L      +   + P  
Sbjct: 127 YCTPCESFFTESQLVDGKCPDCGRPVQPAKEEAYFLKLSKYADRLIEHINTHPEFIQPES 186

Query: 296 SK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY----- 340
            K            Q   + R    +   +  D+     +  D    Y    + Y     
Sbjct: 187 RKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITG-IGYDCDGN 245

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
              K+ + +   ++++G D    + R   +      ++        +      L  DG  
Sbjct: 246 SSDKFNKFWPADLHLIGKD----IIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDG-- 299

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQY 456
            KMSK  G+ +    +VD  G D+VR+ +L            +  + E+   +    +  
Sbjct: 300 -KMSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILGN 358

Query: 457 AYARCRSIFRQA-----KDIFPDLDFDLFPRNVIP 486
              R  S+  +      +D     D+D   + V+ 
Sbjct: 359 LVNRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVT 393


>gi|154303112|ref|XP_001551964.1| hypothetical protein BC1G_09576 [Botryotinia fuckeliana B05.10]
 gi|150855039|gb|EDN30231.1| hypothetical protein BC1G_09576 [Botryotinia fuckeliana B05.10]
          Length = 612

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 75/453 (16%), Positives = 134/453 (29%), Gaps = 92/453 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R       GA+   L   + 
Sbjct: 56  APSPTGNLHLGSMRTALFNFLLAKATGGQFLLRIEDTDTDRTIP----GAE-ERLYRDLE 110

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   Q         P   Y     K +  E A       L +        + +  V    
Sbjct: 111 WAGIQWDEGPKVGGPFAPYRQSERKAMYWEHAQTLVEADLGYRCFCSSKRLHELRVYQSS 170

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K +               S++   RG+   IR  +         + G       K     
Sbjct: 171 KGLPQAYDGTCRHIPKDQSDEKASRGESHVIRMKVPE------QWPGFQDEVYGKIRPTL 224

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHS 361
                      +   +  D  ++KSDG  TY  A++       +  F  + +V+ GS+  
Sbjct: 225 TRS------PQSEYKEFQDPIMVKSDGFPTYHLANV------VDDHFMKITHVVRGSEWI 272

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH------- 412
                  A+  A   +           V L  +    K+SKR G  D  T R        
Sbjct: 273 PSTHMHVAMYQAFGWEPPTFAH-----VGLLLNKDRKKLSKRDGAIDIKTYRDAGYFPET 327

Query: 413 VVDEVGSDSVRFMMLWRKNSELLD-------FDFCKVKEQSKENPVF-----YVQYAYAR 460
           + + V        +L   +    D        D   +K    ++ V      ++Q  +A 
Sbjct: 328 ITNFV-------ALLGWSHDRSYDVMGMQELIDNASMKYTRGDSVVTFEKLNFIQRKHAA 380

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI------ENATI 514
                R++ +  P    DL      P  +         +  L E+  +I       +A  
Sbjct: 381 RYKELRRSDEPIP-PSQDLLELAAKPILNG--------MKTLPEFEDLIFYNCENNDAAK 431

Query: 515 AQEPYKLAFYLYDL--ASVFH-----GHWSHGR 540
                    Y+  +  A + +       +S+ +
Sbjct: 432 E-------NYILSIISAGIQNYTLPESFYSNHK 457


>gi|145251365|ref|XP_001397196.1| glutamyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134082728|emb|CAK42620.1| unnamed protein product [Aspergillus niger]
          Length = 611

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 27/282 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        D    I      ++   + A
Sbjct: 59  APSPTGYLHLGSLRTALFNYLLA---KRTGGQFLLRIEDTDQKRTIPDAEQRLYDDLRWA 115

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +     +   ++ EL+      +        + A  +     
Sbjct: 116 GLHWDEGPVVGGPYGPYRQSERTAIYRSHAQELIENG-HAYRCFCSADRLDAFARHRSQ- 173

Query: 249 LKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMD 305
              L   +D    E      +   +     +  L  +GY ++  ++     +      +D
Sbjct: 174 -AGLPAGYDRKCGEVSAEESEERAAKGEAHVVRLKVEGYPMFNDLVYGKTGQNRSPNKLD 232

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             + ++         D  L+KSDG  TY    LA     +     ++I   G++      
Sbjct: 233 LIERVYD--------DPILIKSDGHPTYH---LANVVDDHLMKITHVIR--GTEWMPSTP 279

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              A+  A      Q        V L  D    K+SKR  D 
Sbjct: 280 MHVALYNAFKWTPPQFGH-----VPLLVDKSGQKLSKRNADI 316


>gi|167031998|ref|YP_001667229.1| valyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166858486|gb|ABY96893.1| valyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 948

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L                               V ++L 
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQML-------------------------------VERQLE 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  AK-GQNRHDLGREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|115454745|ref|NP_001050973.1| Os03g0694900 [Oryza sativa Japonica Group]
 gi|28273401|gb|AAO38487.1| putative valyl tRNA synthetase [Oryza sativa Japonica Group]
 gi|37700350|gb|AAR00640.1| putative valyl tRNA synthetase [Oryza sativa Japonica Group]
 gi|108710540|gb|ABF98335.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108710541|gb|ABF98336.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549444|dbj|BAF12887.1| Os03g0694900 [Oryza sativa Japonica Group]
          Length = 1054

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 98/337 (29%), Gaps = 59/337 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   S   S   +G +         I     N TG +H+GH     + D++   
Sbjct: 97  SPTAVEKSWYSWWESSGYFGADAASSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRW 156

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +        D+    +    LK      
Sbjct: 157 RRMSGYNTLWVPGVDHAGIATQVVVEKKLMRERNLTR---HDIGREEFVSEVLK-----W 208

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D+Y   +LN                         L+ L    D         +     +
Sbjct: 209 KDEYGGTILNQ------------------------LRRLGASLDWSRECFTMDKPRSKAV 244

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG-SYT 332
            +    L +QG +Y          T +    D +          +  +  +LK  G + T
Sbjct: 245 TEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVE------VDYLEIKEETMLKVPGYNTT 298

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----AVSEKKAQINVLLCEL 388
                L  F    E G   +I            R+E +      AV  +  +   L    
Sbjct: 299 VQFGVLISFAYPLEEGLGEIIVAT--------TRIETMLGDTAIAVHPEDGRYKHLHGRY 350

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRF 424
                +G  +K+       I    +VD   G+ +V+ 
Sbjct: 351 AIHPFNGRKLKI-------ICDAELVDPTFGTGAVKI 380


>gi|313898934|ref|ZP_07832461.1| methionine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956133|gb|EFR37774.1| methionine--tRNA ligase [Clostridium sp. HGF2]
          Length = 657

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 142/442 (32%), Gaps = 79/442 (17%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +  +N         I + S  P    H+G+    ++ D +A      GY+V  +   ++ 
Sbjct: 3   KECKNKKPYYITTAITYTSGRP----HIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEH 58

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEK 228
           G +I   A       ++ +             G+  K   +     D +     ++ E++
Sbjct: 59  GQKIEEKAKEAGVTPKEFV---------DKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQ 109

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              I K    Q    I +   + L     + F +E     G        ++  + + Y +
Sbjct: 110 VQKIFKKLYEQG--DIYKSTYEGLYCTPCESFWTESQLVDGKCPDCGRPVEKASEEAYFF 167

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                 P+     +   +  Q   R   + ++  +P             DL   +  ++ 
Sbjct: 168 NLQKYAPRLIKHIEDHPEFIQPESRKNEMINNFLKP----------GLQDLCVSRTSFKW 217

Query: 348 G----FD--NMIYVM-------------GSDHS---GYVKRLEAVAAAVSEKKAQINVLL 385
           G    FD  +++YV               +D +    Y K   A    + +   + + + 
Sbjct: 218 GIPVDFDPGHVVYVWIDALSNYITSLGFDADGNHGELYQKYWPADVHIIGKDILRFHTIY 277

Query: 386 CELVRLYRDGMPI---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              + L   G P+               KMSK  G+ I    +V   G D+VR+ +L   
Sbjct: 278 WP-IMLMALGEPLPKQVFGHPWLLVGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEM 336

Query: 431 N-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
             ++     +  V E+   +    +     R  S+  +  +             VI    
Sbjct: 337 PFAQDGTITWDLVVERINSDLANVLGNLVNRTISMQNKYFN------------GVISNPL 384

Query: 490 EFDTSELQLIVHLAEYPRVIEN 511
           E +  + +LI    + P+ +E 
Sbjct: 385 EQEDIDKELIALALDTPKRVEK 406


>gi|160947447|ref|ZP_02094614.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270]
 gi|158446581|gb|EDP23576.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270]
          Length = 875

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    K +    +   ++   +        I     N TG +H+GH     + D L 
Sbjct: 7   TYNPKDFEKKIYDSWLEDKDFVARVNPDKVPYTIVMPPPNVTGNLHLGHALNNTIQDILI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                SGYE              +  ++S   +  + +  + +   +    G        
Sbjct: 67  RWKRMSGYEAL-------WVPGTDHASISTEAKVVEKIKKDGNSKEKLGRDG--FLEEAW 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  +KY                           I++ LK L +  D              
Sbjct: 118 DWTEKYG------------------------GNIKNQLKTLGVSCDWSRDAFTLDENLSK 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   +   G +Y G
Sbjct: 154 AVEEVFIKMYNDGLIYRG 171



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 104/334 (31%), Gaps = 42/334 (12%)

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----EKWLPIVKDYSVQAMMK 243
           A      +L E  Y    +K      A  +        E    ++W   +++ +  A   
Sbjct: 318 ARKEIIKELKENGYL---IKIEPHNHAVGHCERCKTIIEPIISKQWFVRMEELAKPAKQA 374

Query: 244 IIRDDL----KALNIQHDIFI-------SEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +   L    +     +  ++              G   P+          G V      
Sbjct: 375 YLDGKLNIIPERFGKVYINWLDNIKDWCISRQLWWGHRLPVYYC----KETGEVVVSKKE 430

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
           P +   T   D D     F S +           S   +     DL YF       F   
Sbjct: 431 PKEEGKTFIRDEDTLDTWFSSAL--------WPFSTLGWPDKTEDLKYF-------FPTN 475

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             V G D   +   +  V +++     ++         L RD +  KMSK  G+ I    
Sbjct: 476 TLVTGYD-ILFFWVIRMVFSSL-YNLNEVPFRNVYFTGLIRDELGRKMSKSLGNGIDPIE 533

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D+ G+D++RF ++          D    +++ + N  F  +   A    +     +  
Sbjct: 534 IIDKYGADALRFTLVGGNTPGN---DMRFYEKRVESNRNFANKLWNASRFVLMNLNDEEI 590

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            D+D +          +  + +  +L  +L+++ 
Sbjct: 591 YDIDLNKIEIEDKWILTRLNRTIEELTENLSKFE 624


>gi|254373879|ref|ZP_04989361.1| isoleucine-tRNA ligase [Francisella novicida GA99-3548]
 gi|151571599|gb|EDN37253.1| isoleucine-tRNA ligase [Francisella novicida GA99-3548]
          Length = 935

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +LD      ++I  +      +  +     E+   I  A    + + +       A +
Sbjct: 660 LSNLDGFNPATDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV-------AQL 711

Query: 532 FHGH 535
            H  
Sbjct: 712 IHHF 715


>gi|52840956|ref|YP_094755.1| valyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296746|ref|YP_123115.1| valyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822629|sp|Q5X728|SYV_LEGPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81823457|sp|Q5ZXL2|SYV_LEGPH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52628067|gb|AAU26808.1| valyl tRNA synthase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|53750531|emb|CAH11933.1| valyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 921

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + K L     S   +     G+G +  I     N TG +H+GH     + D L 
Sbjct: 4   TYSPEAIEKALYKKWES--HHYFQPRGEGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +   +   + AG         V  R  +A              GV  K    
Sbjct: 62  RYHRMLGDKTLWQPGTDHAG----ISTQLVVERQLEA-------------QGVSRKD--- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E++L  V  +  ++    I   ++ L    D          G  +
Sbjct: 102 ------------LTREQFLDKVWQWKEESG-NTITQQMRRLGASVDWSRERFTMDEGLSA 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            ++ +   L  +G +Y G               D + L          +  P++ S+
Sbjct: 149 AVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSE 205


>gi|325849754|ref|ZP_08170901.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325479983|gb|EGC83063.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 875

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 74/266 (27%), Gaps = 40/266 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P    K +      G  +   +        I     N TG +H+GH     + D +    
Sbjct: 7   PQKFEKDIYKKWEDGGYFKARVNKDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYK 66

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYE          G    +++       +        D                   
Sbjct: 67  RMQGYEACWIP-----GTDHASISTEAKVVGKIKSEGKSKD------------------- 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       +K+L    D+  +     I+  L+ + +  D         +     +R
Sbjct: 103 --------ELGRDKFLEECWDW-TEEYGGTIKKQLRTVGVSCDWDRDSFTMDKNLTRAVR 153

Query: 275 DIIDNLARQGYVYEG---ILPPPKSKT----TQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +   +   G +Y G   +   P++KT     +    D++  L+      +D D  +  +
Sbjct: 154 KVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIKYFFEDSDEFITIA 213

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
                    DLA      +  F + I
Sbjct: 214 TTRPETMLGDLAVAVNPEDERFKDKI 239


>gi|323700147|ref|ZP_08112059.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 485

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 104/318 (32%), Gaps = 45/318 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R +VV D L   +   GY+V       D   +I         +    +    S++
Sbjct: 36  HIGHARSSVVFDVLYRYLKHEGYDVNFIRNFTDIDDKI--------IKRANEVGKEASEI 87

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM---MKIIRDDLKALN 253
            E +    Y+             + LN       P   ++  + +    ++I        
Sbjct: 88  AEKFIGEFYV-----------DMDRLNIERPSVEPKCTEHIPEMIALTQRLIDKGHAYAT 136

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
              D++     F  G        ID L        G    P  +     D     L   +
Sbjct: 137 PSGDVYFKVRSF-EGYGKLSGRNIDELES------GARIAPGEEKEDPLDF---ALWKAA 186

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE---AV 370
                  + P  K    +    + ++      E+  D  + + G          E   A 
Sbjct: 187 KPGEPFWESPWGKGRPGWHLECSAMS------EKYADLPLDIHGGGQDLAFPHHENEVAQ 240

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           + A + K      +    V++  +    KMSK  G+F T+R ++ +   +++R+ +L   
Sbjct: 241 SEAATGKPFANYWVHNGFVQINSE----KMSKSLGNFFTIRDILAKFLPETLRYFLLTMH 296

Query: 431 NSELLDFDFCKVKEQSKE 448
               LDF F  ++E  K 
Sbjct: 297 YRSPLDFSFDALEEAEKG 314


>gi|319409844|emb|CBY90153.1| isoleucyl-tRNA synthetase (isoleucine-tRNA ligase; IleRS)
           [Neisseria meningitidis WUE 2594]
          Length = 929

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    + ++ P      ++AM++      + R       +   +     + H     
Sbjct: 434 DKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAE 493

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   +  +G   E      KS+     D +    L  +  V  D         GS 
Sbjct: 494 LLEKVALKIEEKGI--EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDS--------GST 543

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E  +   +Y+ GSD   G+ +       A S  +A    LL     
Sbjct: 544 HYSV-----VKQREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFV 598

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           + ++G   KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 599 VDQNGR--KMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTE--- 653

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                 +Y R R+          D +  +          E D   + L   L E
Sbjct: 654 ------SYRRIRNTLSFLFANLSDFNP-IEDAVQQADMVEIDRYSVVLARQLQE 700


>gi|321264169|ref|XP_003196802.1| glutamyl-tRNA synthetase [Cryptococcus gattii WM276]
 gi|317463279|gb|ADV25015.1| Glutamyl-tRNA synthetase, putative [Cryptococcus gattii WM276]
          Length = 588

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 107/286 (37%), Gaps = 41/286 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R  Y   A   +++L  ++ 
Sbjct: 46  APSPTGHLHLGGLRTALFNHILARKWKGKWLLRIE--DTDRSRYTEGA---VDSLRSALE 100

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM- 241
           W   +     D  +  G   G Y +    ++   Y+ ELL+  +E +        ++A+ 
Sbjct: 101 WAGLEY----DEGVGAGGSYGPYTQSERIDIYQHYTKELLSR-DEAYECFCSPTELEAIK 155

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + + +   K         ++E++  R   +  + ++      G   E  LPP     T +
Sbjct: 156 LSLTQQGFKHSYDGRCRHLTEEEVSRRKRAGQKFVVRYKNAPG---ELDLPPDMIFGTHQ 212

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                      + ++G D D  LLKSDG  TY    LA     +     +++   G +  
Sbjct: 213 P----------TAVIGPD-DFVLLKSDGWPTYH---LASVVDDHLMEITHVLR--GEEWL 256

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             + +   +  A      Q        + L  +    K+SKR GD 
Sbjct: 257 PSIPKHHKLYRAFGWAPPQFAH-----LPLLCNPDGTKLSKRRGDT 297


>gi|331234226|ref|XP_003329773.1| glutamyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308763|gb|EFP85354.1| glutamyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 530

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 97/315 (30%), Gaps = 56/315 (17%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R        V + F + +PTG +H+G  R A+    LA  +   G  + R     D    
Sbjct: 22  RRTAHSEQPVRLRF-APSPTGYLHLGGLRTALFNHLLARKLR--GKWILRIE-DTDQSRL 77

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++    S+    + A  + D         G Y++   + +   +  +LL    + +    
Sbjct: 78  VDGAVESIIETLEWAKLDYDEGPNRPGECGPYIQSQRQTIYQAHRDQLLQSG-QAYRCFC 136

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  M +  R      N+ +D           +      +   L+        I   
Sbjct: 137 SPDRLDQMRQEFRSS--GSNLTYDR----KCLQLSEAEVTEKMSRGLS------HVIRLK 184

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                    D+   QL F++       D  L+K+DG+ TY  A                 
Sbjct: 185 NSDNPVSVDDLVYGQLTFKNNTQD---DVILIKADGTPTYHFA----------------- 224

Query: 354 YVMGSDHSG---YVKRLEAVA----------AAVSEKKAQINVLLCELVRLYRDGMPIKM 400
            V+  DH     +V R E              A      +        + L  +    K+
Sbjct: 225 NVVD-DHHMGISHVLRGEEWLSSTPKHILLYNAFGFPLPRFAH-----LPLLVNADGSKL 278

Query: 401 SKRAGDFITLRHVVD 415
           SKR+GD     ++  
Sbjct: 279 SKRSGDVRVEDYIAK 293


>gi|221054251|ref|XP_002261873.1| methionine--trna ligase [Plasmodium knowlesi strain H]
 gi|193808333|emb|CAQ39036.1| methionine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 885

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 131/387 (33%), Gaps = 52/387 (13%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL++S     K ++S +     Y            I +V+ +P    H+GH    V+ D 
Sbjct: 202 NLFISK-IHEKNINSYLKKEKFY--------ITTAINYVNGDP----HIGHAYEIVLADA 248

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE---------GY 200
           +A      G  V      ++ G +I   A       Q+    N     E          Y
Sbjct: 249 IARYHKNIGRRVFFTTGADEHGMKIANQAARNNLTPQELCDQNVLKFKELNKLLHVDEDY 308

Query: 201 YPG---VYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSV----QAMMKIIRDDLKAL 252
           Y        K + +E+  K   +E +   E +    V++ +     +A +   RD L  +
Sbjct: 309 YVRTTCDKHKKIAQEIWTKCEQNEDIYLGEYEGWYNVREETYVPENEAKLMNYRDPLNNI 368

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE-----GILPPPKSKTTQKCDMDRK 307
            ++    + E  +          +I+ +    +  +       +     +        R 
Sbjct: 369 KLEK---MKESSYFFKMSKYQERLINYIHENPHFIQPEQKRNEILQRLKEPLADLSCSRT 425

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD----HSGY 363
           +  +   +  D+     +  D    Y+++   +     E  +   ++++G D    H+  
Sbjct: 426 KFSWGIPVPSDNKHVMYVWMDALINYYSS--CFIMDGKEDYWPADVHLIGKDIVWFHTVI 483

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +      +S        + C    L  DG   KMSK  G+ I    +++  GSD+ R
Sbjct: 484 FPSI-----LMSVNVDLPKSVFCHGFVLAGDGK--KMSKSLGNVINPFEIIETYGSDAFR 536

Query: 424 FMMLWR-KNSELLDFDFCKVKEQSKEN 449
           F ++   K    + FD   + +    +
Sbjct: 537 FHVIKETKRGFDMRFDIDNLVDMCNSD 563


>gi|296283863|ref|ZP_06861861.1| glutamyl- and glutaminyl-tRNA synthetase [Citromicrobium
           bathyomarinum JL354]
          Length = 481

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 75/409 (18%), Positives = 142/409 (34%), Gaps = 81/409 (19%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTL 177
            I   + +PTG +H+G  R A+     A       L+     +  R          I+ +
Sbjct: 8   IITRFAPSPTGYLHLGGARTALFNWLYARHHGGKALLRIEDTDAKRS-----TQDAIDKI 62

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              + W     L  ++  + +      + +     LA+ ++ +    PEE          
Sbjct: 63  IEGLDWL---GLSFDEESVFQSQRAQRHAEVANTLLANGHAYKCYATPEE---------- 109

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++AM    R       +++D       +   +P P         ++G  +   L   K  
Sbjct: 110 LEAMRAEQRA--NKQPMRYDG-----RWRDREPGP--------EQEGQPFTVRLKVAKDG 154

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D  + ++  R+  + D +   LL++DG+ TY    LA     ++ G  ++I   G
Sbjct: 155 ETAIEDQVQGRVTVRNEEIDDYI---LLRADGTPTYM---LAVVVDDHDMGVTHVIR--G 206

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     R   +  A++  +   +  +   V L       K+SKR G  + +    DE+
Sbjct: 207 DDHLNNAFRQLPIYRAMNAIEGGWDDPVYAHVPLIHGSDGAKLSKRHG-AVGVEAYRDEL 265

Query: 418 GS-------------------------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           G                          +++    L         FD  K++  +      
Sbjct: 266 GILPEALFNYLLRLGWGHGDREEITQAEAIELFDLDGVGRSPARFDIKKLQNLNGH---- 321

Query: 453 YVQYA-YARCRSIF--RQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQ 497
           Y++ A  AR   I     A  +  ++D DL  R + + +    DT EL 
Sbjct: 322 YIREADDARLAQIVAGELAGSVDGEIDQDLLTRAMPVLKTRAKDTHELA 370


>gi|291562908|emb|CBL41724.1| methionyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 658

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 124/418 (29%), Gaps = 63/418 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                   I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I  
Sbjct: 3   TNCKKPYYISTAIAYTSGKPHIGNTYEIVLADAIARYKREQGYDVYFQTGTDEHGQKIEL 62

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            A       ++ +      + E       +  +     +K+     ++ E++   I K  
Sbjct: 63  KAADAGVTPKEFVDGVAGQIKE-------IWDLMNTSYNKFIRTTDDYHEKQVQKIFKKL 115

Query: 237 SVQAMMKIIRDDLKALNIQHDIFIS---------------------EDDFHRGDPSPIRD 275
             Q    I +   + L                              E+ +          
Sbjct: 116 YDQG--DIYKGHYEGLYCTPCESFWTPSQVVDGKCPDCGRPVQPAKEEAYFFRMSKYAPK 173

Query: 276 IIDNLAR----------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +I+ +            +  +    L P      Q   + R    +   +  D      +
Sbjct: 174 LIEYINEHPEFIQPVSRKNEMMNNFLLP----GLQDLCVSRTSFKWGIPVTFDPKHVTYV 229

Query: 326 KSDGSYTYFAADLAYFKC-----KYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSE 376
             D    Y    + Y        K+++ +   ++++G D    H+ Y         A+  
Sbjct: 230 WLDALTNYITG-IGYDCDGNSDEKFKKYWPADLHLIGKDIIRFHTIY---WPIFLMALGL 285

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELL 435
              +   +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L         
Sbjct: 286 PLPK--QVFGHPWLLQGDG---KMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDG 340

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
              +  + E+   +    +     R  S+  +      +      P +   + +  +T
Sbjct: 341 VISWDLMVERMNSDLANILGNLVNRTVSMTNKYFGGIVENKGAAEPVDEELKATVLET 398


>gi|32266081|ref|NP_860113.1| glutamylglutaminyl-tRNA synthetase [Helicobacter hepaticus ATCC
           51449]
 gi|67461998|sp|Q7VIM2|SYE2_HELHP RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|32262130|gb|AAP77179.1| glutamyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 441

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 105/347 (30%), Gaps = 76/347 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+                    YI           ++     +  
Sbjct: 5   APSPTGDMHIGNLRAAIF------------------NYI-----------IAKQQNQKFL 35

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   D+D+         +    KE+ +  +   L +    +     +   Q    +I  D
Sbjct: 36  IRIEDTDIARN------IVDKDKEILNLLNLFGLLWDNLVYQSSNFERHRQLAQHLISKD 89

Query: 249 LKALNIQHDIFISEDDF----HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           L A          E        +  P         + +       +     S+     D 
Sbjct: 90  L-AFYCYCSKEFLESKRLEAKEQKKPFRYDPSWAEIEKSSNTKPVVRIRGASEAISFEDA 148

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            +  L F +  +       +LK DG  TY   + A      +  +D    V G DH    
Sbjct: 149 IKGTLRFEAHEIDSF---VILKEDGIPTY---NFACAID--DMLYDISFIVRGEDHVSNT 200

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416
            R   +  A+   K    VL    + +       KMSKR  +  ++  +++E        
Sbjct: 201 PRQILIHRALGYDK----VLGYAHLPIILGESGSKMSKRD-NASSVAWLLEEGFLPQAIM 255

Query: 417 -----VG----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                +G           D+  +  +       + FD  +++  ++E
Sbjct: 256 NYLISMGNHTPTEVFKLQDAYNWFDIKNIAKSPVKFDIKRLRFLNRE 302


>gi|328955961|ref|YP_004373294.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456285|gb|AEB07479.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 488

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 115/392 (29%), Gaps = 67/392 (17%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  +V +           H+G+ R  +  D +   +  SGYEVT             
Sbjct: 15  KPIEAGRVRMYVCGPTVYDDAHIGNARTFITLDAIRRWLIASGYEVT------------- 61

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPI 232
                     Q     +D  +      G   + V ++ A+++   +        +     
Sbjct: 62  --------FVQNLTDVDDKIIGRAADQGRSAEQVAQQFAERFIDVMRRANVLDPDIRPRA 113

Query: 233 VKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            ++    ++ +  +I+          D++ S            RD ID L         +
Sbjct: 114 TREIPAMIEMIKSLIKQGHAYAAGNGDVYFSVRSDPSYGEVSGRD-IDEL---------M 163

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +     +   K D     L  ++   G+ + D P     G   +     A       R  
Sbjct: 164 VGARIEENAVKRDPLDFALW-KAAKPGEPMWDSPW--GPGRPGWHTECAA----MVHRHL 216

Query: 350 DNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
              I + G          E   A A              +  L  DG   KMSK  G+F 
Sbjct: 217 GCPIDIHGGGSDLIFPHHENECAQAECCWHEGFANTWLHVGMLMVDGE--KMSKSLGNFW 274

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC--------------------KVKEQSKE 448
           TL  V+D   + ++R +ML       LDF F                        +++  
Sbjct: 275 TLEEVLDRHSAAALRLLMLQTHYRTPLDFSFERLEGAQTSLGRIVSTVGNLRWASDRASG 334

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
           NP   +    AR   I R       D DF+  
Sbjct: 335 NPDASLAQGLARRMQIARSEFKEQMDDDFNTA 366


>gi|291482409|dbj|BAI83484.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 664

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V                   +    +     
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDV-----------------RYLTGTDEHGQKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     ++   +    L    + ++   +      + K+ +  L  
Sbjct: 60  QQKAEQENITPQEYVDRAAADIQKLWKQ--LEISNDDFIRTTEKRHKVVIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   I             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDIERNEKGEV---IGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR   +G   DR L   + + T+                    DLA  +  ++ G     
Sbjct: 175 FR---MGKYADRLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPE 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|288800157|ref|ZP_06405616.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333405|gb|EFC71884.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 1192

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 12/149 (8%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSK  G+ +    +++
Sbjct: 698 GVDQTRGWFFTLHAIATMIFDSVAFKNVISTGLV---LDSKGNKMSKHVGNVVNPFDMIE 754

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G+DSVRF M+      + L FD   V E  ++          F+  YA     S   +
Sbjct: 755 KYGADSVRFYMMTNSEPWDNLKFDKEGVDEVRRKFFGTLYNTYSFFALYANVDGFSFAEK 814

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
              +    + D +  + +         EL
Sbjct: 815 EVPLNDRPEIDRWILSCLHTLIRNVDKEL 843


>gi|239637476|ref|ZP_04678450.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596921|gb|EEQ79444.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 114/375 (30%), Gaps = 128/375 (34%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V                      RY   L  
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDV----------------------RY---LTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D         G  +    +E A K     L + +E             M+  I+     
Sbjct: 50  TDE-------HGQKI----QEKAQKAGKTELEYLDE-------------MIAGIKSLWDK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP----------PKSKTTQK 301
           L I +D FI            +  + + L +QG +Y G               +S+  + 
Sbjct: 86  LEISNDDFI--RTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVEP 143

Query: 302 CDMDRKQLLFRSTMVGDDV----------------DRPLLKSDGSYTYF----------- 334
              + K +  +S   G +V                DR L   D +  +            
Sbjct: 144 VYENGKIVGGKSPDSGHEVELVKEESYFFNIKKYTDRLLEFYDQNPDFIQPPSRKNEMIN 203

Query: 335 ------AADLAYFKCKYERG------FDNMIYVM--------------GSDHSGYVKRLE 368
                   DLA  +  +  G        +++YV                 D + + K   
Sbjct: 204 NFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDALVNYISSLGYLSDDETLFNKYWP 263

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVV 414
           A    ++++  + + ++  ++ +  D                  KMSK  G+ +    ++
Sbjct: 264 ADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLI 323

Query: 415 DEVGSDSVRFMMLWR 429
           D  G D+ R+ ++  
Sbjct: 324 DLYGLDATRYYLMRE 338


>gi|238809718|dbj|BAH69508.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 843

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S +   ++        + ++ + K     +     N TG +H+GH     + DT+   
Sbjct: 19  DHSSIESDIAKKWKEKKIFSKHDLSKKPFTIL-LPPPNVTGKLHIGHALDTYIQDTIIRY 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY+V   +Y+  AG  ++   ++   + +  +Y                       
Sbjct: 78  KKLSGYDV---FYV--AG--MDHAGIATQSKVENTIY----------------------- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK+L  V ++  +   ++ R    +L +  D               +
Sbjct: 108 -QKEGLNRHDLGREKFLKRVWEWK-EEYAELFRKQWASLGLALDYERERFTLDVKSNEAV 165

Query: 274 RDIIDNLARQGYVYEGI 290
                 L ++G +Y G 
Sbjct: 166 LKAFITLYKKGLIYHGT 182


>gi|223044412|ref|ZP_03614445.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442201|gb|EEE48313.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 656

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 112/353 (31%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMIAGIKSLWDKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGEI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNINKY---TDRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D   + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|86153308|ref|ZP_01071512.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843034|gb|EAQ60245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 628

 Score = 48.4 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 100/322 (31%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYER 347
           G+     ++T+    +   Q       + DD     +  D  + Y ++ D        + 
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIIYVWLDALFIYISSLDFQSKGENAKF 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              + ++++G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 248 WPAH-VHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + VVD  GS++ R+ +L  
Sbjct: 303 VKPKEVVDAYGSEAFRYFLLRE 324


>gi|298291808|ref|YP_003693747.1| glutamyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928319|gb|ADH89128.1| glutamyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 478

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 97/305 (31%), Gaps = 56/305 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A                    A+   + L +  
Sbjct: 5   VVTRFAPSPTGFLHIGGARTALFNWLYAR-------------------AKGGKMLLRIED 45

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             +Q       D        + +   G  +     +       E+ +   +    Y+  A
Sbjct: 46  TDRQRSTPEAIDAIIDGLKWLGIDWSGDVIYQFARAARHREAVEQMIAAGRAYPCYATAA 105

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ +R+  +             D    D    R     L             P    T 
Sbjct: 106 ELEEMRETARKEGRPPRYDGRWRDRDAADYPTDRKPAIRLRA-----------PIEGETI 154

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + +++F++  +    D  LL+SDG+ TY  + +      ++    ++I   G DH
Sbjct: 155 IDDLVQGRVVFQNKELD---DLVLLRSDGTPTYMLSVV---VDDHDMSVTHIIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R   +  A+  +  ++       + L       K+SKR G           +G D
Sbjct: 207 LTNAARQTQIYHALGWEVPRMAH-----IPLIHGPDGAKLSKRHG----------ALGVD 251

Query: 421 SVRFM 425
           + R M
Sbjct: 252 AYRAM 256


>gi|237740202|ref|ZP_04570683.1| glutamyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422219|gb|EEO37266.1| glutamyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 510

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 99/295 (33%), Gaps = 46/295 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIND 169
              K     V+ +PTG  HVG    A+          GD +  +      +  R  Y   
Sbjct: 4   DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNNGDFILRI-----EDTDRNRYT-- 56

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
            G++   +  ++ W         D     G   G Y +    +L  KY+ EL+      +
Sbjct: 57  EGSE-QMIFDALKWLDLDYAEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG-AY 110

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   ++ + +  +     L   +D             S  ++ I+   + G  Y  
Sbjct: 111 YCFCDQERLENLRERQKAM--GLPPGYDGHC---------RSLTKEEIEEKLKAGVPYVI 159

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  G 
Sbjct: 160 RLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLMGI 213

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 214 THVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 261


>gi|254469852|ref|ZP_05083257.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961687|gb|EEA96882.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 517

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 103/326 (31%), Gaps = 38/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS----------- 180
           P G  H+GH   A+  D LA      G EV      +  G ++   A+            
Sbjct: 16  PNGEPHIGHAYEAIATDVLARFQRLDGREVHFLTGTDVHGQKMLQTAVKEGMSPSDLADK 75

Query: 181 ---VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +F    + L  ++ D  +      Y            + ++       W  +  +  
Sbjct: 76  NSKLFREMVEMLGCSNDDFIQTNEERHYKSCQAIWQKMADAGDIYKDSYAGWYSVRDEAY 135

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            Q     +R+D      Q   +   E++ +    S   D +  L  +   + G       
Sbjct: 136 YQEGETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYEDKLIELYEKNPDFIGPNARRNE 195

Query: 297 KTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYE 346
             +      +   + R+T      + GD+     +  D    Y       D+     K+ 
Sbjct: 196 VMSFVKGGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALGYPDMDGDMAKFW 255

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
               ++I   G D    + R  AV   A  +S        +      L+  G   KMSK 
Sbjct: 256 PANAHII---GKD----IIRFHAVYWPAFLMSAGVPLPERVFAHGF-LFNSGE--KMSKS 305

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ I  R +V+  G D +R+  L  
Sbjct: 306 LGNVIAPRDLVETYGLDQIRYFFLRE 331


>gi|183983752|ref|YP_001852043.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M]
 gi|183177078|gb|ACC42188.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M]
          Length = 886

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +         +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPAAMEGDIYQKWADAGYFVADPTSSKPPYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 77  KRMQGYEVL-------WQPGMDHAGIATQTVVEKQLAAD--------------------- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDFGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   Q    D +
Sbjct: 164 RTIFKRLYDAGLIYQAERLVNWSPVLQTAISDLE 197



 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 37/207 (17%)

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSE 433
             + AQ+      L  L RD    KMSK  G+ I     +D  G+D++RF +        
Sbjct: 516 GRRGAQVPFTDVFLHGLIRDEFGRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGS 575

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            L      V+                       +  +       +      +P   E   
Sbjct: 576 DLAVGEDAVRASRNFGT----------------KLFNATRYALLNGAALAPLPPLGELTD 619

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANN 552
           ++  ++  L E    +++A  + E  +    LY  A   F   +                
Sbjct: 620 ADRWILGRLEEVRAEVDSAFDSYEFSRACEALYHFAWDEFCDWY---------------- 663

Query: 553 RKLTMMRLQ--LVHAVASIINSGLNII 577
            +L   +L   L    A ++ +GL+ +
Sbjct: 664 VELAKTQLAEGLSATTA-VLAAGLDTL 689


>gi|50365171|ref|YP_053596.1| valyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827303|sp|Q6F1B1|SYV_MESFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50363727|gb|AAT75712.1| valyl tRNA synthetase [Mesoplasma florum L1]
          Length = 873

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S   + +      +    +  N   K  K +I     N TG +H+GH     + D +   
Sbjct: 10  SYEIVEENRYEWWIQNEYFKANPDSKKPKFSIVLPPPNVTGKLHIGHAWDGSLQDAIIRF 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G++V   Y        ++   +S   + +  L             G+    +G+E 
Sbjct: 70  KKLNGFDVL--YLPG-----MDHAGISTQVKVEAKLRE----------QGISRFELGRE- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E+ W              IIR     L +  D  + +          +
Sbjct: 112 ---------KFLEQAWK------WKHEYAAIIRQQWSKLGLAFDYSMEKFTLDDDINKIV 156

Query: 274 RDIIDNLARQGYVYEG 289
            +I  +   +G +Y+G
Sbjct: 157 TEIFVDFYNKGLIYKG 172


>gi|158316956|ref|YP_001509464.1| valyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112361|gb|ABW14558.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp.
           EAN1pec]
          Length = 876

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 12/154 (7%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++ GSD+VR+     +      FD  ++K  +       
Sbjct: 582 DPDRKKMSKSKGNVVTPMGLLEQHGSDAVRYWAASGRPGTDTAFDVGQMK--TGRRLAIK 639

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +  A      +    +    + D  L         +  +  +  L+  LA        A 
Sbjct: 640 ILNASRFVLGLAEAGEGEAFEGDAALAADAAPGPAAITEPLDRALLAELARVVDTATGAF 699

Query: 514 IAQEPYKLAFY--LYDLASVFHGHWSHGRENPRL 545
                     Y    ++   F   W    +   L
Sbjct: 700 EGY------DYTRALEVTETF--FWRFCDDYVEL 725


>gi|116617313|ref|YP_817684.1| glutamyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272486|sp|Q03ZR1|SYE_LEUMM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116096160|gb|ABJ61311.1| glutamyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 498

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 111/335 (33%), Gaps = 45/335 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A+     A    ++G  V R           +   +Q+  LA   
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGTFVIRIEDTDSARNIADGEKSQLENLAW-- 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYSVQ 239
                   ++   D P     G Y +    E  +  ++   LL           K Y   
Sbjct: 66  ----LGLDWDESPDKP--GVYGPYRQSERNEQGIYQEFIDALLASG-----QAYKSYKTS 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKT 298
             +   R+  +    Q   ++ E   + G  +  R+        QG         P+ + 
Sbjct: 115 GQLASERE-AQQAAKQAPHYVYE---YEGLTNEEREAKYAEFEAQGLKPVVRFRVPEEQV 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ +  +   +  VG   D  + K+DG  TY   + A     +     +++   G 
Sbjct: 171 YAWDDIVKGHIEIGAKEVG--GDWVIQKADGMPTY---NFAVVVDDHLMKISHVLR--GD 223

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   +  A+     +       +  +       K+SKR  + +       E+G
Sbjct: 224 DHVSNTPKQIMIYEALGWDVPKFGH----MALIINGETGKKLSKRDENLLQFVEQYKELG 279

Query: 419 ---SDSVRFMMLWRKNSELLD--FDFCKVKEQSKE 448
                 V F+ L   + +  D  F   + KE   E
Sbjct: 280 YQPQAMVNFIGLLGWSPKGEDEIFSLSEFKEMFDE 314


>gi|268609037|ref|ZP_06142764.1| valyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 872

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 51/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +         +   +  K T   I     N TG +H+GH     + D L   
Sbjct: 10  DPKDFEDRIYQAWNDKGCFRAEVDPKKTPYTIVIPPPNITGQLHMGHALDETLQDILIRW 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY               +  A++   +  +A+        +    G   +    E 
Sbjct: 70  KRMSGYSAL-------WLPGTDHAAIATEAKIVEAMRKEGVTKEDLGREGFMKR--AWEW 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y                           I + LK L    D          G    +
Sbjct: 121 KKQYGGR------------------------IVEQLKKLGSSCDWSRERFTMDEGCSKAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           +++      +G +Y G
Sbjct: 157 KEVFVKYYEKGLIYRG 172



 Score = 37.2 bits (85), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+         ++ + +    +   K   + +L     L 
Sbjct: 469 TEDLKYFYPTNTLVTGYD-IIFFW------VIRMMFSGLENMG--KVPFDTVLIHG--LV 517

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           RD    KMSK  G+ I    V++E G+D++RFM+    + 
Sbjct: 518 RDAQGRKMSKSLGNGIDPLEVINEYGADALRFMLATGNSP 557


>gi|58337877|ref|YP_194462.1| leucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904527|ref|ZP_04022332.1| leucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311412|sp|Q5FIP3|SYL_LACAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58255194|gb|AAV43431.1| leucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867736|gb|EEJ75157.1| leucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 804

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++ +L      Y   ++  T   
Sbjct: 648 ENDGELDKV---YAETVKKVTEDF 668


>gi|328676512|gb|AEB27382.1| Isoleucyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 935

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +LD      ++I  +      +  +     E+   I  A    + + +       A +
Sbjct: 660 LSNLDGFNPATDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV-------AQL 711

Query: 532 FHGH 535
            H  
Sbjct: 712 IHHF 715


>gi|319776933|ref|YP_004136584.1| valyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038008|gb|ADV34207.1| Valyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 832

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S +   ++        + ++ + K     +     N TG +H+GH     + DT+   
Sbjct: 8   DHSSIESDIAKKWKEKKIFSKHDLSKKPFTIL-LPPPNVTGKLHIGHALDTYIQDTIIRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY+V   +Y+  AG  ++   ++   + +  +Y                       
Sbjct: 67  KKLSGYDV---FYV--AG--MDHAGIATQSKVENTIY----------------------- 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK+L  V ++  +   ++ R    +L +  D               +
Sbjct: 97  -QKEGLNRHDLGREKFLKRVWEWK-EEYAELFRKQWASLGLALDYERERFTLDVKSNEAV 154

Query: 274 RDIIDNLARQGYVYEGI 290
                 L ++G +Y G 
Sbjct: 155 LKAFITLYKKGLIYHGT 171


>gi|308189742|ref|YP_003922673.1| valine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624484|gb|ADN68789.1| valine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 832

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S +   ++        + ++ + K     +     N TG +H+GH     + DT+   
Sbjct: 8   DHSSIESDIAKKWKEKKIFSKHDLSKKPFTIL-LPPPNVTGKLHIGHALDTYIQDTIIRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY+V   +Y+  AG  ++   ++   + +  +Y                       
Sbjct: 67  KKLSGYDV---FYV--AG--MDHAGIATQSKVENTIY----------------------- 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK+L  V ++  +   ++ R    +L +  D               +
Sbjct: 97  -QKEGLNRHDLGREKFLKRVWEWK-EEYAELFRKQWASLGLALDYERERFTLDVKSNEAV 154

Query: 274 RDIIDNLARQGYVYEGI 290
                 L ++G +Y G 
Sbjct: 155 LKAFITLYKKGLIYHGT 171


>gi|304391677|ref|ZP_07373619.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295906|gb|EFL90264.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 513

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 101/321 (31%), Gaps = 36/321 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      GY+V  +   +  G ++   A  +    ++    
Sbjct: 14  PNGAPHIGHAYEFICADAIARFKRLDGYDVRFQIGTDVHGQKMFQTARDLGITPKELADK 73

Query: 192 NDSDLP--EGYYPGVYLKHVGKELADKYSS------------ELLNFPEEKWLPIVKDYS 237
           N         +Y   + + +     D + +            ++       W  +  +  
Sbjct: 74  NSDAFQSMTEHYGISWDRFIRTSDEDHHRASQAIWSAMEANGDIYKDAYAGWYSVRDEAY 133

Query: 238 VQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
            +     + +D K L  Q     ++ E+ +     +    ++     Q         +  
Sbjct: 134 YEEDETRLTEDGKRLGPQGSPVEWVEEESYFFRLSAYGDKLLALFDEQPDFIAPASRKNE 193

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYE 346
           +        +   + R    +   + GDD     +  D    Y       D       Y 
Sbjct: 194 IVSFVKGGLRDLSISRTTFDWGVKVPGDDKHVMYVWVDALTNYLTGAGYPDTESELWSY- 252

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--LLCELVRLYRDGMPIKMSKRA 404
              D  ++V+G D    + R  AV        A I++   +     L  +G   KMSK  
Sbjct: 253 WPAD--LHVIGKD----ITRFHAVYWPAFLMSAGIDLPKRVYGHGFLLANGE--KMSKSL 304

Query: 405 GDFITLRHVVDEVGSDSVRFM 425
           G+      +  E G D++R+ 
Sbjct: 305 GNVADPMDLAAEYGIDAMRYY 325


>gi|256846797|ref|ZP_05552252.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717763|gb|EEU31321.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 513

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 46/297 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYI 167
                K     V+ +PTG  HVG    A+          GD +  +      +  R  Y 
Sbjct: 5   CDNCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNGGDFILRI-----EDTDRNRYT 59

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
             AG++   +  ++ W         D     G   G Y +    +L  KY+ EL+     
Sbjct: 60  --AGSE-QMIFDALKWLDLDYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVERGG- 111

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
            +        ++ + +  +     L   +D         + +       I+   + G  Y
Sbjct: 112 AYYCFCDHERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPY 160

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P    T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  
Sbjct: 161 VIRLKMPYEGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLM 214

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G  ++I     +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 215 GITHVIR--AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 264


>gi|114777695|ref|ZP_01452655.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
 gi|114551911|gb|EAU54445.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
          Length = 936

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 69/171 (40%), Gaps = 19/171 (11%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +Y+ GSD   G+ +    +  +V  + +A    +L     + ++G   KMSK  G+ I  
Sbjct: 587 LYLEGSDQHRGWFQSS--LLESVGTRGRAPFKGVLTHGFVVDKNG--NKMSKSKGNVIAP 642

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           + ++ ++G+D +R  +     S  +      +K+ S+         AY R R+  R    
Sbjct: 643 QKIIQQMGADILRLWIASSDYSADIRISDDIIKQLSE---------AYRRIRNTIRFLLG 693

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
                D    P +     SE    +  ++  L+   R +     + + +++
Sbjct: 694 NLDGFD----PAHDAVALSERTPLDQWVMHRLSRLERHVHACNESYQFHRI 740


>gi|56697021|ref|YP_167383.1| glutamyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|67461892|sp|Q5LRH2|SYE2_SILPO RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|56678758|gb|AAV95424.1| glutamyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 468

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 53/254 (20%)

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   +  P+S  T   D  +  +  R+  +    D  LL+SDG+  Y    LA     ++
Sbjct: 140 YVIRIKAPQSGETVIRDQVQGDVTIRNDQLD---DMVLLRSDGTPVYM---LAVVVDDHD 193

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G  ++I   G DH     R   +  A+  +     V +   + L       K+SKR G 
Sbjct: 194 MGVTHVIR--GDDHLNNAARQMMIYQAMGWE-----VPVWAHIPLIHGPDGKKLSKRHGA 246

Query: 407 F------------ITLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVK 443
                          +R+ +  +G           + +  +  L         FD  K++
Sbjct: 247 LGAQEYQAMGYPAAGMRNYLARLGWSHGDDEFFTDAQAREWFDLDGIGKSPARFDLKKLE 306

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
             S        Q+      +  R   +I   L     P     Q  + + +    +  L 
Sbjct: 307 NLSG-------QHIAVSDDAALR--HEIEAYLAAAGLPALTQTQSGDLERA----MYCLK 353

Query: 504 E----YPRVIENAT 513
           +    +P +IE A 
Sbjct: 354 DRARTFPELIEKAA 367


>gi|332673949|gb|AEE70766.1| valine--tRNA ligase [Helicobacter pylori 83]
          Length = 872

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 99/312 (31%), Gaps = 42/312 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLSQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSY---TYFAA 336
               K        R + LF  + +             G  V  PL+    S     +   
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIHRTISIIADLHVEM 268

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL----Y 392
           +      K   G D   Y +G  H          A  + ++K  +N    E   L     
Sbjct: 269 EFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLERLKA 321

Query: 393 RDGMPIKMSKRA 404
           RD +  K+ + A
Sbjct: 322 RDKVVEKLKENA 333


>gi|313891950|ref|ZP_07825551.1| glutamate--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119593|gb|EFR42784.1| glutamate--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 485

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 96/303 (31%), Gaps = 63/303 (20%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + F + +PTGP H+G  R A+          GD +  +        T+E   N  
Sbjct: 2   QKKIRVRF-APSPTGPFHIGGARSALFNWLLAKHMNGDFIVRIEDTDTVRSTKESEEN-- 58

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPG----VYLKHVGKELADK----YSSELL 222
                 +  S+ W         D   P   Y         K + ++L  +    Y+ +  
Sbjct: 59  ------IKESLKWLGLNWDEGIDVGGPHAPYRQTERLEKYKKIVEQLIKEDKAYYAYDTA 112

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              E      +K+          ++       ++                          
Sbjct: 113 EELEASRQAQLKEGKTPVYQGYCKNLTAEEQKKY------------------------KE 148

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G      L  P     +  DM R  + F+++ VGD +   ++KSDG   Y   + A   
Sbjct: 149 EGRKPVVRLRVPTHGVFEFDDMVRGHVEFQASGVGDFI---IMKSDGIPVY---NFAVVI 202

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
              +    ++I     +H     R  A+  A+  +     V +   + L       KMSK
Sbjct: 203 DDIDMEITHVIR--AEEHLSNTPRQIAIYQALGHE-----VPVFGHISLILGSDHKKMSK 255

Query: 403 RAG 405
           R G
Sbjct: 256 RHG 258


>gi|16077106|ref|NP_387919.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307847|ref|ZP_03589694.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312169|ref|ZP_03593974.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317102|ref|ZP_03598396.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321365|ref|ZP_03602659.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|586060|sp|P37465|SYM_BACSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|467427|dbj|BAA05273.1| methionyl-tRNA synthetase [Bacillus subtilis]
 gi|2632305|emb|CAB11814.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 664

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A             
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEQ----------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     ++   +    L    + ++   +      + K+ +  L  
Sbjct: 66  ------ENITPQEYVDRAAADIQKLWKQ--LEISNDDFIRTTEKRHKVVIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   I             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDIERNEKGEV---IGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR   +G   DR L   + + T+                    DLA  +  ++ G     
Sbjct: 175 FR---MGKYADRLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPE 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|118497048|ref|YP_898098.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194324283|ref|ZP_03058057.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|166200209|sp|A0Q529|SYI_FRATN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118422954|gb|ABK89344.1| isoleucyl-tRNA synthetase [Francisella novicida U112]
 gi|194321730|gb|EDX19214.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 935

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +LD      ++I  +      +  +     E+   I  A    + + +       A +
Sbjct: 660 LSNLDGFNPATDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV-------AQL 711

Query: 532 FHGH 535
            H  
Sbjct: 712 IHHF 715


>gi|54293703|ref|YP_126118.1| valyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822435|sp|Q5WYI0|SYV_LEGPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53753535|emb|CAH14990.1| valyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 921

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + K L     S   +     G+G +  I     N TG +H+GH     + D L 
Sbjct: 4   TYSPEAIEKALYKKWES--HHYFQPRGEGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +   +   + AG         V  R  +A              GV  K    
Sbjct: 62  RYHRMLGDKTLWQPGTDHAG----ISTQLVVERQLEA-------------QGVSRKE--- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E++L  V  +  ++    I   ++ L    D          G  +
Sbjct: 102 ------------LTREQFLDKVWQWKEESG-NTITQQMRRLGASVDWSRERFTMDEGLSA 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            ++ +   L  +G +Y G               D + L          +  P++ S+
Sbjct: 149 AVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSE 205


>gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 508

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 107/362 (29%), Gaps = 53/362 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D ++  +   G++V    Y+      I  +   +  R  +        L
Sbjct: 60  HIGHARVMVAFDVVSRWLRHLGFDV---NYV----RNITDIDDKIIARANEN-GEEIGQL 111

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E +           E A     E  +                     I D L+ +    
Sbjct: 112 TERF------ITAMHEDAAALGCESPDAEPRATQ-------------HIDDMLQMIGTLE 152

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFR 312
                 +  +      +   +D     G + +  L   ++ +    D D+K     +L++
Sbjct: 153 QK----EHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDFVLWK 208

Query: 313 STMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           +   G+   D       G   +     A         FD    + G  H       E   
Sbjct: 209 AAKAGEPQWDSSW--GGGRPGWHIECSAMSTKCLGNSFD----IHGGGHDLQFPHHENEI 262

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
           A  SE           +   + +    KMSK  G+F T+R V+++   +++RF +L    
Sbjct: 263 AQ-SEAATGCTYANNWMHVGFINVDGEKMSKSLGNFFTIREVMEKFHPETIRFFILSSHY 321

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              ++F    +KE        Y             +A +   D   +      I   S  
Sbjct: 322 RSQVNFSDAALKEAHSGLTRVYQAL----------KAAEAVLDTPVNAQSEATIDTASID 371

Query: 492 DT 493
             
Sbjct: 372 SE 373


>gi|227535768|ref|ZP_03965817.1| glutamate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244256|gb|EEI94271.1| glutamate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 508

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 40/229 (17%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYIN 168
             +V + F + +PTG +H+G  R A+     A       ++     + TR     E YIN
Sbjct: 4   QKRVRVRF-APSPTGGLHLGGVRTALFNYLFARQHQGEFILRIEDTDQTRFVPGAEEYIN 62

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           +  A    +              ++S   EG Y G Y +   K    +Y+ +L+      
Sbjct: 63  ECLAWCGIV-------------PDESPSKEGAY-GPYRQSERKPSYRQYAEQLVE----- 103

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVY 287
                K ++  A       D +     +  +  E+  +  +   +  ++   L  +G+ +
Sbjct: 104 -----KGFAYYAFDTAEELDEQRKIQPNFRYSHENRMNLRNSLSLPAEVTQQLLTEGHSH 158

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              +  P+ +T    DM R ++ F + +V    D+ LLK+DG  TY  A
Sbjct: 159 TIRIKMPQDETVSFEDMIRGRVSFETGLVD---DKVLLKADGMPTYHLA 204


>gi|269860102|ref|XP_002649774.1| valyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066833|gb|EED44304.1| valyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 947

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 69/256 (26%), Gaps = 41/256 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K     + + I             +I     N TG +H+GH     + D++      +G
Sbjct: 58  AKWKQYWLDNKIYECNIDDNIENNFSIVIPPPNVTGSLHIGHAMMIAIEDSIVRYNRLNG 117

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V     ++ AG    T+ ++   R          D P+  +   +L +   E    Y 
Sbjct: 118 KNVLYLPGLDHAGIATQTVIMNTIAR----------DKPDKLHDKEFLLNAANEWVKLYG 167

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                                     I D    L    D               +     
Sbjct: 168 GR------------------------IIDQFNRLGTSLDFSKQIFTLDNKISLAVNKAFI 203

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L  +G +Y        S   Q    D + + ++    G+      L  DG   Y    +
Sbjct: 204 TLYERGLIYRANKIVNWSGKLQTTISDLE-VNYKEITKGEY-----LNVDGK-MYQFGVM 256

Query: 339 AYFKCKYERGFDNMIY 354
            Y K    R  D + Y
Sbjct: 257 YYVKYYILRNEDKVKY 272


>gi|254415946|ref|ZP_05029703.1| DALR anticodon binding domain family [Microcoleus chthonoplastes
           PCC 7420]
 gi|196177373|gb|EDX72380.1| DALR anticodon binding domain family [Microcoleus chthonoplastes
           PCC 7420]
          Length = 376

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 17/96 (17%)

Query: 492 DTSELQLIVHLAEYPRVIENA-----TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546
             +E  LIV L +   VI  +             LA     ++  +   +   R    ++
Sbjct: 290 HPAEWDLIVQLFDLLDVISTSDCQRWVKQG----LA-----VSEAYEQFYKSCRIWGEVK 340

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
               ++  L   RL L+     ++ S L  +GV +P
Sbjct: 341 I---HDLPLARARLGLIGVTQVVLRSLLEKLGVSAP 373


>gi|118472696|ref|YP_888893.1| valyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118173983|gb|ABK74879.1| valyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 872

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 70/241 (29%), Gaps = 42/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPGAVEAELYQGWVDAGYFTADPASDKPPYSIVLPPPNVTGSLHMGHALDHTLMDVLTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 77  KRMQGYEVL-------WLPGMDHAGIATQTVVEKQLAAD--------------------- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E+++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDLGREEFVAKVWDWKRESG-GTIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPL 324
           R I   L   G +Y+         +L    S    K +    +L+ FR   + DD    +
Sbjct: 164 RTIFKRLFDAGLIYQAERLVNWSPVLETAISDLEVKYEDVEGELVSFRYGSMNDDEPHIV 223

Query: 325 L 325
           +
Sbjct: 224 V 224



 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 37/225 (16%)

Query: 363 YVKRLEAVAAAVSEKKA---------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V R+      V +  A         Q+      L  L RD    KMSK  G+ I     
Sbjct: 495 WVARMMMFGTFVGDDPAVTLEGARGRQVPFENVFLHGLIRDEFGRKMSKSRGNGIDPLDW 554

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           V++ G+D++RF  L R  S   D    +   ++  N                 +  +   
Sbjct: 555 VEKFGADALRFT-LARGASPGGDLSIGEDHARASRN--------------FATKLFNATR 599

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVF 532
               +      +P  SE   ++  ++  L E    +++A    E  +    LY  A   F
Sbjct: 600 FALMNGAAPAPLPAASELTDADRWILGRLEEVRAEVDSAFDNYEFNRACEALYHFAWDEF 659

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
              +        L  VQ    ++   R        +++ + L+ +
Sbjct: 660 CDWY------VELAKVQLGQEEVHTAR------TTAVLAAVLDTL 692


>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6831683|sp|O67163|SYC_AQUAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 495

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 107/333 (32%), Gaps = 50/333 (15%)

Query: 126 EFVSANPTGPM------------HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           EFV  NP   +            HVGH R  +V D     +   GY+V            
Sbjct: 15  EFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGYQVK-------FVRN 67

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYL--KHVGKELADKYSSELLNFPEEKWLP 231
              +   +  R +Q   +    + + Y    Y+  +++    AD       + PE     
Sbjct: 68  FTDVDDKIINRAKQECTDF-MTIADRYIARYYVDMENIRVRPADVEPRVTEHIPE----- 121

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
                 ++ + K++     A  ++ D++ S   F        RD I+ L        G  
Sbjct: 122 -----IIEVIQKLVEKGY-AYVVEGDVYFSVKKFKDYGKLSKRD-IEELIA------GAR 168

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P  K     D     L   S       D P  K  G   +    +A       +    
Sbjct: 169 VEPSEKKRDPLDF---ALWKASKAGEPAWDSPWGK--GRPGWHTECVAMVF----KHLGE 219

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            I + G          E   A       +          L   G   KMSK  G+++TLR
Sbjct: 220 TIDIHGGGLDLVFPHHENEIAQAEAITGKPFARYWMHNGLVTVG-GQKMSKSLGNYVTLR 278

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
            V  +   D +R ++L+      LDF + K++E
Sbjct: 279 EVYTKYHPDVLRLLVLFTHYRSPLDFSWEKMEE 311


>gi|297544354|ref|YP_003676656.1| glutamyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842129|gb|ADH60645.1| glutamyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 480

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 123/400 (30%), Gaps = 59/400 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +      ++D   Q               
Sbjct: 9   APSPTGSLHIGGARTALFNWLFAR---HYGGKFILR--VDDTDLQ--RSTKESMKGILDG 61

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  EG            +  D+Y        +E        +  +  ++ +R  
Sbjct: 62  LKWLGIDWDEGPI-------YQSQRLDEYRKFANKLLDEGKAYYC--FCTKEELEEMRRR 112

Query: 249 LKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +               + G   +  R+ I+   ++G      L  P    T   D+ R 
Sbjct: 113 AENEGRPF--------MYTGKCRNLTREQIEEYLKKGKRPVIRLKVPSEGKTIVHDIIRG 164

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F ++ + D +   ++KSD   TY   + A     Y+ G  ++I     +H     + 
Sbjct: 165 DVEFDNSTIDDFI---IMKSDNMPTY---NFATVVDDYQMGITHVIR--AEEHLSNTPKQ 216

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVRFMM 426
             +  A+  +  Q        V +       K+SKR G   +        +    V ++ 
Sbjct: 217 ILIYEALGLETPQFAH-----VSMVLAPDRSKLSKRHGATSVQEFEEQGYLPEAIVNYIT 271

Query: 427 LWRKNSELLD--FDFCK-----VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           L     +  +  FD  K       E+  +NP  Y                    + D D 
Sbjct: 272 LLGWMPKDGEEIFDVSKSIKEFTLERVSKNPAVYDVQKLTWIN------GHYIRNYDLDK 325

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRV--IENATIAQE 517
               VIP   +       LI    +Y  +  I +    +E
Sbjct: 326 LTEAVIPFLKD-----KNLIREEFDYDYIKKIVSIVRERE 360


>gi|42523768|ref|NP_969148.1| glutamyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|67461780|sp|Q6MKR6|SYE_BDEBA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|39575975|emb|CAE80141.1| glutamyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 490

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 77/429 (17%), Positives = 125/429 (29%), Gaps = 94/429 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G+ +  +        T+E      G   + + L
Sbjct: 14  APSPTGYLHVGGARTALYNYLFAKKNGGEFILRIEDTDEARSTQESL---RGVVDDLVWL 70

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDY 236
            + W             P G Y      H+ KE+AD   K       F  E+ +   K  
Sbjct: 71  GLKWDEGVDPVTLKDVGPNGPYRQSERLHIYKEIADQLLKEGKAYYCFMTEEDIEKQKAA 130

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +              L   +  +  +    R         +     +  V          
Sbjct: 131 A---------GSFAHLVSPYQDWTLDQALERLKTG--DKAVVRFKTKNLV---------- 169

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K     D+ R ++ F S MVGD     LL+SDG   Y       F C  +     M +V 
Sbjct: 170 KDYIFTDLVRGEVKFPSDMVGDF---VLLRSDGMPVYN------FCCVVDDHLMKMTHVF 220

Query: 357 GS-DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            + +H     R   +  A++    +   +      L  D    K+SKR G  +    + D
Sbjct: 221 RAEEHLPNTLRQLMIYEAMNWPTPEFGHM-----ALILDEDRQKLSKRKG-AVACGQLKD 274

Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           E                            D +    + R N     FD  K         
Sbjct: 275 EGYLASAVLNFIALLGWSDPQGREILSVKDMLEVFDISRLNPSGAIFDRVK--------- 325

Query: 451 VFYVQYA-YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
            F    A + R       A+       F       +P +  + +  L L      Y  ++
Sbjct: 326 -FKWMNAQHLRA---LPNAELWQAVAPFLARENMDLPTDPAWQSKSLDLFK---PYMEIL 378

Query: 510 ENATIAQEP 518
            +A     P
Sbjct: 379 ADAIELYRP 387


>gi|222100839|ref|YP_002535407.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254781695|sp|B9KAQ8|SYC_THENN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221573229|gb|ACM24041.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 460

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 107/343 (31%), Gaps = 55/343 (16%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +HVG+ R AVV D     + + GY V       D   +I   A  +              
Sbjct: 35  IHVGNARPAVVFDVFRRYLEYRGYRVIMVQNFTDIDDKIINKANQL-------------- 80

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                  GV  K V      +Y  +                   A       D     ++
Sbjct: 81  -------GVDPKMVADTFIAEYWRDAHALGIR-----------PANFHPRTTDFVDDIVE 122

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK-----QLL 310
               + E  +     + +   +    + G + +  +    +    + D  +       L 
Sbjct: 123 IIEKLVERGYAYQTKTGVYFDVRKFKKYGELSKKRIEDLIAGARVEVDETKNFPLDFSLW 182

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEA 369
            R+       + P    +G   +               FD  I+  G D    + +  +A
Sbjct: 183 KRAKPGEPCWNSPW--GEGRPGWHIECTVMSVKILGESFD--IHAGGEDLVFPHHENEKA 238

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            A A++ K      +   +VR   D    KMSK  G+  T+R  V + G D +R+M+L +
Sbjct: 239 QAEALTGKIFAKYWMHNGMVRFLGD----KMSKSTGNIFTVREAVKKYGRDGLRYMILSK 294

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
                +DF    + + SK         A  R   I R+ +   
Sbjct: 295 HYRSPMDFSEDLLSDYSK---------AVRRVWEILRRYESNG 328


>gi|221194861|ref|ZP_03567918.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185765|gb|EEE18155.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 513

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 82/478 (17%), Positives = 136/478 (28%), Gaps = 72/478 (15%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 KV +          +H+G+ R  +  D +   +  +GYEVT    + D   +I 
Sbjct: 15  TPIDEGKVRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMHAGYEVTFAQNLTDVDDKII 74

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             AL      Q+      S                  +   +   +L+           +
Sbjct: 75  NRALEQGRTAQEVAEEYSSAF----------------IEQMHRFNILDPDIRPRATHEIN 118

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             V+ +  +I           D++ S    H       RD +D L               
Sbjct: 119 AMVEMIQSLIDQGFAYAVPSGDVYFSVRADHNYGVLSGRD-LDQLRA---------GERV 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              T+K D     L   +         P    +G   + +   A             I +
Sbjct: 169 EVNTEKRDPFDFALWKTAKPGEPSWPSPW--GEGRPGWHSECCAMIHRYLGTP----IDI 222

Query: 356 MGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            G          E   A A       +         L  +G   KMSK  G+F TL+ V+
Sbjct: 223 HGGGADLVFPHHENETAQASCCWHEPLANYWMHAGMLRVEGE--KMSKSLGNFYTLKEVL 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKV-----KEQSKENPVFYVQYAYARCRSIFRQAK 469
           D   +D+VR +ML       LDF F ++       +  +  V  +++A    +S  R A 
Sbjct: 281 DSYSADAVRLLMLQTHYRASLDFSFERLDGAIGTLERMKTCVANLRWAAKNAQSTERSAD 340

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                   D        Q+ +    E +L          I  A    E          +A
Sbjct: 341 AGRSANTGD------ATQDHKQSDRENEL-------TSAIGTACENFE--------RSMA 379

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLT------MMRLQLVHAVASIINSGLNIIGVES 581
             F+              V A N  L         +L L    A  +     ++G+  
Sbjct: 380 DDFNT---AEALAAMFTLVTAANTYLADAADAINAKLTL--HAADTLTELFGVLGISV 432


>gi|208780505|ref|ZP_03247845.1| isoleucyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743651|gb|EDZ89955.1| isoleucyl-tRNA synthetase [Francisella novicida FTG]
          Length = 919

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 539 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 595

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 596 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 643

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +LD      ++I  +      +  +     E+   I  A    + + +       A +
Sbjct: 644 LSNLDGFNPATDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV-------AQL 695

Query: 532 FHGH 535
            H  
Sbjct: 696 IHHF 699


>gi|254372408|ref|ZP_04987898.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570136|gb|EDN35790.1| isoleucyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 935

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +LD      ++I  +      +  +     E+   I  A    + + +       A +
Sbjct: 660 LSNLDGFNPATDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV-------AQL 711

Query: 532 FHGH 535
            H  
Sbjct: 712 IHHF 715


>gi|19112227|ref|NP_595435.1| cytoplasmic valine-tRNA ligase Vrs2 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|12230647|sp|O75005|SYV_SCHPO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3738176|emb|CAA21312.1| cytoplasmic valine-tRNA ligase Vrs2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 980

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 49/194 (25%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           ++    + S              K     I     N TG +H+GH     + D+LA    
Sbjct: 105 AWYDWWVKSGFFEPEFGPDGKPKKEGVFVITSPPPNVTGALHIGHALTIAIQDSLARWNR 164

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G       ++       +   LS     ++ L+          YP      +  E  +
Sbjct: 165 MLG---KTVLFLGG----FDHAGLSTQSVVEKKLWYTQKKTRHD-YPRDKFVDIVWEWKE 216

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y +                         I++ +  L    D               + +
Sbjct: 217 EYHNR------------------------IKNQMSRLGGSFDWTREAFTMDENLSRAVVE 252

Query: 276 IIDNLARQGYVYEG 289
               L  +  +Y  
Sbjct: 253 TFVRLHEENIIYRA 266


>gi|291563752|emb|CBL42568.1| valyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 883

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 70/249 (28%), Gaps = 37/249 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYG----RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
             +P+ +   L    +    +     R          I     N TG +H+GH     + 
Sbjct: 7   TYNPADIEDRLYQKWLDNKYFHADAERGRREGKKPFTIVMPPPNITGQLHMGHALDNTMQ 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY                           +AL+   +D          + 
Sbjct: 67  DILIRYKRMQGY---------------------------EALWQPGTDHAAIATEVKVID 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + KE  +K       F +E W    KD     ++K     L  L    D          
Sbjct: 100 KLKKEGINKNDLGREGFLKEAW--KWKDEYGTRIIKQ----LHKLGSSADWDRERFTMDA 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           G    + ++   L  +GY+Y+G          +    D +            ++ P++  
Sbjct: 154 GCSEAVLEVFTRLYEKGYIYKGSRIINWCPVCKTSISDAEVEHKEQDGFFWHINYPIVGE 213

Query: 328 DGSYTYFAA 336
           +G +   A 
Sbjct: 214 EGRFVEIAT 222


>gi|269103423|ref|ZP_06156120.1| isoleucyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163321|gb|EEZ41817.1| isoleucyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 930

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+ +K     VL    V    DG   KMSK  G+ +  +
Sbjct: 551 LYLEGSDQHRGWFQSSLISSVAMKDKAPYKQVLTHGFVV---DGQGRKMSKSIGNVVAPK 607

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 608 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTARFFLAN 658

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               + +    + +  E         +   +A    ++  A      + +  
Sbjct: 659 LHGFNPE---TDCVAPEDMVALDRWAVGRAMAAQEEIV-KAYEEYNLHAVTQ 706


>gi|297590580|ref|ZP_06949219.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576879|gb|EFH95594.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312439051|gb|ADQ78122.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193893|gb|EFU24287.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 466

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L     ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQTVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGATIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|254476817|ref|ZP_05090203.1| glutamyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031060|gb|EEB71895.1| glutamyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 466

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 89/290 (30%), Gaps = 41/290 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 3   KPVVTRFAPSPTGYLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRERSTPEATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    ++D ++   +        V K+L  +       F  +  +   ++ +  A 
Sbjct: 60  LQGMSWLGLDHDGEVISQFERADRHAEVAKQLLAE-GKAYKCFATQDEIAAFREEAKAAG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +         + D        H   P  IR                +  P+   T  
Sbjct: 119 KSTLYRSPWRDAAEAD--------HPDAPYVIR----------------IKAPQDGVTVI 154

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  +  R+  +    D  LL+SDG+  Y    LA     Y+ G  ++I   G DH 
Sbjct: 155 KDEVQGDVTIRNDQLD---DMILLRSDGTPVYM---LAVVVDDYDMGVTHVIR--GDDHL 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+        + +   + L       K+SKR G      
Sbjct: 207 NNAARQMMIYQAMGWD-----IPVWAHIPLIHGPDGKKLSKRHGALGAQE 251


>gi|126726368|ref|ZP_01742209.1| Glutamyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704231|gb|EBA03323.1| Glutamyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 463

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 123/415 (29%), Gaps = 77/415 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +   + +PTG +H+G  R A+     A                        T  L V 
Sbjct: 1   MVVTRFAPSPTGYLHIGSARTALFNWLFAR-------------------HHGGTFLLRVE 41

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +       +         + L    +  +     E       + L     Y   A  
Sbjct: 42  DTDRNRYTPEATQAIYDGLKWLGLDWDAEPTSQFEGRERHAAVAAEMLERGTAYKCFATQ 101

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSKTTQ 300
             I    ++        + +  +   DP+   D   +  L             P    T 
Sbjct: 102 DEIEAFRESARENGTSTLYQSPWRDCDPADHPDAPFVVRLKA-----------PTEGETI 150

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++ +++  +    D  LL+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 151 VRDVVQGEVTYKNANLD---DMVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 202

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------I 408
                R   +  A+      + V     +    DG   K+SKR G               
Sbjct: 203 LNNTPRQTLIYQAMGWD---LPVFAHIPLIHGPDGK--KLSKRHGAMGAHEYQALGYIAA 257

Query: 409 TLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            +R+ +  +G             ++ +  L         FDF K+   + ++     +Y 
Sbjct: 258 GMRNYLARLGWSHGDDEFFTTEQAIEWFGLDGIGKSPSRFDFKKLDHINGQHVAGAEKYD 317

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                S F    D  P  D  L   N+          E      L   P +IE A
Sbjct: 318 LLTDISAFLAITDQNPLSDAQLTGLNLALPFI----QERA--KTL---PDLIEKA 363


>gi|118618980|ref|YP_907312.1| valyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571090|gb|ABL05841.1| valyl-tRNA synthetase protein ValS [Mycobacterium ulcerans Agy99]
          Length = 886

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +         +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPAAMEGDIYQKWADAGYFVADPTSSKPPYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 77  KRMQGYEVL-------WQPGMDHAGIATQTVVEKQLAAD--------------------- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDFGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   Q    D +
Sbjct: 164 RTIFKRLYDAGLIYQAERLVNWSPVLQTAISDLE 197



 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 37/207 (17%)

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSE 433
             + AQ+      L  L RD    KMSK  G+ I     +D  G+D++RF +        
Sbjct: 516 GRRGAQVPFTDVFLHGLIRDEFGRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGS 575

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            L      V+                       +  +       +      +P   E   
Sbjct: 576 DLAVGEDAVRASRNFGT----------------KLFNATRYALLNGAALAPLPPLGELTD 619

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANN 552
           ++  ++  L E    +++A  + E  +    LY  A   F   +                
Sbjct: 620 ADRWILGRLEEVRAEVDSAFDSYEFSRACEALYHFAWDEFCDWY---------------- 663

Query: 553 RKLTMMRLQ--LVHAVASIINSGLNII 577
            +L   +L   L    A ++ +GL+ +
Sbjct: 664 VELAKTQLAEGLSATTA-VLAAGLDTL 689


>gi|309775299|ref|ZP_07670308.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916962|gb|EFP62693.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 681

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 137/420 (32%), Gaps = 75/420 (17%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    ++ D +A      GY+V  +   ++ G +I   A       ++ +   
Sbjct: 45  SGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAKEAGVTPKEFV--- 101

Query: 193 DSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                     G+  K   +     D +     ++ E++   I K    Q    I +   +
Sbjct: 102 ------DKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQG--DIYKSTYE 153

Query: 251 ALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            L     + F +E     G        ++  + + Y +      P+     +   +  Q 
Sbjct: 154 GLYCTPCESFWTESQLVDGKCPDCGRPVEKASEEAYFFNLQKYAPRLIKHIEDHPEFIQP 213

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM------- 356
             R   + ++  +P             DL   +  ++ G    FD  +++YV        
Sbjct: 214 ESRKNEMINNFLKP----------GLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNY 263

Query: 357 ------GSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI--------- 398
                  +D +    Y K   A    + +   + + +    + L   G P+         
Sbjct: 264 ITSLGFDADGNHGELYKKYWPADVHIIGKDILRFHTIYWP-IMLMALGEPLPKQVFGHPW 322

Query: 399 ------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPV 451
                 KMSK  G+ I    +V   G D+VR+ +L     ++     +  V E+   +  
Sbjct: 323 LLVGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLA 382

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
             +     R  S+  +  +             VI    E +  + +LI    + P+ +E 
Sbjct: 383 NVLGNLVNRTISMQNKYFN------------GVISNPLEQEDIDKELIALALDTPKRVEK 430


>gi|262341212|ref|YP_003284067.1| valine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272549|gb|ACY40457.1| valine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 883

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 63/225 (28%), Gaps = 35/225 (15%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           I++   P  + K      + G  Y  +         I     N TG +H+GH     + D
Sbjct: 3   ISIKYDPKSVEKKRYHYWMKG-NYFSSYPDDRIPYTIVMPPPNITGVLHIGHMLNNTIQD 61

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       GY           G    ++A       Q           + +       +
Sbjct: 62  VLIRYARMKGYNACWIP-----GTDHASIATEAKVVDQLKKQG----FSKSFLGRDKFLN 112

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              E A K+                          II D LK L    D   ++   ++ 
Sbjct: 113 YVLEWAKKHK------------------------NIIFDQLKKLGCSCDWKRTQFTMNQK 148

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
               +  I  +L   GY+Y             K  +  ++++++ 
Sbjct: 149 LSKSVSKIFIDLYEHGYIYRDYHVVNWDPEA-KTTLSDEEVVYKE 192


>gi|254571747|ref|XP_002492983.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia
           pastoris GS115]
 gi|238032781|emb|CAY70804.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia
           pastoris GS115]
          Length = 1072

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 47/194 (24%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+    +   +                 +I     N TG +H+GH     + DTL     
Sbjct: 123 SWYEWWVKEGLFEPEFGPDGKPKPAGVFSIPAPPPNITGALHIGHALTIALQDTLIRFYR 182

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W                                
Sbjct: 183 MKGKTTLYLPGFDHAGIATQSVVEKSLW-------------------------------A 211

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +      +   EK++  V D+        IR   + L   +D        +      + +
Sbjct: 212 QEGKTRHDLGREKFIEKVWDWK-DVYQNRIRSQFEKLGASYDFSREAFTLNPMLSKAVTE 270

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 271 AFVRLHEDGTIYRA 284


>gi|170045615|ref|XP_001850398.1| valyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167868586|gb|EDS31969.1| valyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 984

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 59/213 (27%), Gaps = 32/213 (15%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L  +Y   ++ +     +       G   + ++     N TG +H+GH     + D +  
Sbjct: 39  LDSAYKPALVEAAHRDVVSRSVTCGGGSKRFSMLLPPPNVTGELHLGHALTCAIQDVMMR 98

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GYE      ++ AG     +                               V K 
Sbjct: 99  WKRKQGYEGLWIPGMDHAGIATQVV-------------------------------VEKR 127

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L  +      +   E++L  +  +  +     I  DL+ L    D               
Sbjct: 128 LRKESGVGRHDLGRERFLEEIWKWREEKGRS-IEGDLRGLGSSMDWDREYFTMDEQQSRA 186

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +R+    L   G +Y        S + +    D
Sbjct: 187 VREAFVRLFEAGLIYRDNSLVNWSCSLESAISD 219


>gi|78357880|ref|YP_389329.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220285|gb|ABB39634.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 883

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 54/195 (27%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +       +  +    G   +I     N TG +H+GH     + D L    
Sbjct: 12  PQDIENRWRTHWEENKTFTPDPDAPGEPYSIVIPPPNVTGALHMGHALNLTLQDILCRFH 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           ++ L+   +D        V  + + +E  
Sbjct: 72  RQKG---------------------------RKVLWVPGTDHAGIATQNVVERQLAREGK 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++      F E  W    ++     ++  IR     +    D          G    +R
Sbjct: 105 GRHDLGREKFIERVWQ--WREEYGNRILSQIR----KMGASVDWTRERFTMDEGLSRAVR 158

Query: 275 DIIDNLARQGYVYEG 289
            +   L   G +Y+G
Sbjct: 159 QVFVKLYEDGLIYKG 173


>gi|242371680|ref|ZP_04817254.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350629|gb|EES42230.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 656

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TELEYLDEMIAGIKSLWDKLEIS---NDDFIRTTEERHKQVVEKV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D +   G +   +         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKI---VGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG-- 348
              F         DR L   D +  +                    DLA  +  ++ G  
Sbjct: 169 SYFFNINKY---TDRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVR 225

Query: 349 ----FDNMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D + + K   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISSLGYLSEDETLFNKYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK  G+ +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRE 338


>gi|225869045|ref|YP_002744993.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702321|emb|CAX00124.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 667

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 107/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A       Q  +  
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQDKAQEAGLSPQAYVDG 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              ++             +++      +E+       LL   +        W  +  +++
Sbjct: 76  MAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIYLGTYSGWYSVSDEEF 135

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +  +  D     I           ++SE+ +          ++     Q    + 
Sbjct: 136 FTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYADRLVAFFKAQPDFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 196 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 253

Query: 344 KYERGFD-----NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
           K    FD      + +++G D    + R  ++      +         L+     + +DG
Sbjct: 254 KDHANFDKFWSGRVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 309

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 310 ---KMSKSKGNVIYPEMLVERFGLDPLRYYLMR 339


>gi|330927717|ref|XP_003301973.1| hypothetical protein PTT_13631 [Pyrenophora teres f. teres 0-1]
 gi|311322930|gb|EFQ89942.1| hypothetical protein PTT_13631 [Pyrenophora teres f. teres 0-1]
          Length = 544

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 89/289 (30%), Gaps = 42/289 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R  +          L   + 
Sbjct: 55  APSPTGYLHLGSLRTALFNYLLAKRTGGQFLLRIEDTDQKRTVH-----DAEQRLFDDLR 109

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSVQ 239
           W   Q     +   P G Y       + KE A    +  +    F   + L  + ++  +
Sbjct: 110 WAGLQWDEGPEVGGPYGPYKQSERSAIYKEHAHTLLESGNAYRCFCSTERLNALAEHRHK 169

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII-DNLARQGYVYEGILPPPKSKT 298
                I  D            S+D   +G+   IR  + D       +  G   P K + 
Sbjct: 170 L---GIATDYDRTCAIIPKQESDDRASKGESHTIRLKVPDQYPAYKDLIYGTFRPLKRRG 226

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                                 D  LLKSDG  TY    LA     +     ++I   GS
Sbjct: 227 HV--------------TESAYEDPILLKSDGLPTYH---LANVVDDHLMKITHVIR--GS 267

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +      +  A+  A      +        V L  D    K+SKR  D 
Sbjct: 268 EWMPSTPKHIAMYQAFGWTPPEFAH-----VGLLVDEAGNKLSKRNFDT 311


>gi|253702345|ref|YP_003023534.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
 gi|251777195|gb|ACT19776.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 925

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 21/171 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       +     +    NVL    V    DG   KMSK  G+ +    
Sbjct: 559 YLEGSDQHRGWFHSSLLASVGTRGRAPYKNVLTHGFVM---DGAGRKMSKSVGNVVAPED 615

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G D +R  +  +   + L      +   S+         +Y R R+  R      
Sbjct: 616 VIKKFGGDVLRLWVAAQDYRDDLRISQEILTRLSE---------SYRRIRNTCRYILGNI 666

Query: 473 PDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            D   D DL     +P+   +   +L+L+         +  +    E + L
Sbjct: 667 HDFNPDTDLVAYADMPELDRWAMHQLELLK------EKVLASYKDSEFHIL 711


>gi|111115567|ref|YP_710185.1| valyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|110890841|gb|ABH02009.1| valyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 875

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 66/213 (30%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + K   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYNKWLKNNVFLPDNSLFKKFSMVA--PPPNVTGVLHMGHALNFVLQDILVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  + +D     Y    L     +L 
Sbjct: 70  RMKKHNTLWLFGTDHAG----IATQAVFERHLKNIGKSKND-----YEREELVQEIFKLK 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK+   ++N                         +K L   +D               + 
Sbjct: 121 DKHRGVIVNQ------------------------IKKLGASYDHTRERFTLDDSLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 965

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV +K     V L +LV   RD    KMSK  G+ I    +VDE G+D++
Sbjct: 579 WVARMMMMQQAVVDKDPFHTVYLHQLV---RDEKGHKMSKTKGNVIDPLEIVDEFGADAL 635

Query: 423 RFMM 426
           RF M
Sbjct: 636 RFTM 639



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 66/248 (26%), Gaps = 23/248 (9%)

Query: 92  YLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
               +     L      SG         +     I     N TG +HVGH     + D L
Sbjct: 6   TFDAAQAENRLYEAWETSGSFTAGANASRPETFCIMIPPPNVTGALHVGHAFNNTLQDVL 65

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G++              +   ++   + ++ L               +L  + 
Sbjct: 66  TRWHRMRGFDTL-------WQPGQDHAGIATQLQVEKMLAGQGQPGRRDLGREKFLAKI- 117

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-IFISEDDFHRGD 269
            E   +Y   ++N  +           + A     R+         D     E+  +  D
Sbjct: 118 WEWKGQYGGTIVNQLKR----------LGASCDWSRNAFTMAGASGDPRTGHENSANFHD 167

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +  ++  +G +Y G          +    D +               PL   + 
Sbjct: 168 --AVLKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENTEVDGHMWHFKYPLAGGE- 224

Query: 330 SYTYFAAD 337
           SYTY   D
Sbjct: 225 SYTYIEKD 232


>gi|312978116|ref|ZP_07789861.1| leucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895091|gb|EFQ44160.1| leucine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 804

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 44/205 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         +LY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQKLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
            ++ +L      Y   ++  T   E
Sbjct: 648 KNDGELDKV---YAETVKKVTEDFE 669


>gi|307543943|ref|YP_003896422.1| valyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307215967|emb|CBV41237.1| valyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 948

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 61/213 (28%), Gaps = 34/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +  +  G+G   +I     N TG +H+GH     + DTL    
Sbjct: 7   PEQIENRWYQRWEEDGHFAPS--GEGEPYSIMIPPPNVTGSLHMGHAFQDTIMDTLTRWR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L                               V +++A
Sbjct: 65  RMQGRNTLWQVGTDHAGIATQML-------------------------------VERKVA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +      +   E +   + ++  ++   I R  L+ +    D          G    ++
Sbjct: 94  AEEGKSRHDLGREAFTDKIWEWKHESGGHITRQ-LRRMGASVDWSRERFTMDDGFYKAVQ 152

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L  +G +Y G        T      D +
Sbjct: 153 EVFVQLFDKGLIYRGKRLVNWDPTLHTAISDLE 185


>gi|116071913|ref|ZP_01469181.1| valyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065536|gb|EAU71294.1| valyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 914

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 53/193 (27%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +   +G    +     N TG +H+GH     + DT+      +G
Sbjct: 14  EARWQQAWEEQGAFHPDPAAEGEPFAVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++   +  
Sbjct: 74  KNVLC--------------------------------LPGTDHASIAVQSILEKQLKEEG 101

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L     +  ++  + I   L+ L    D          G    +++   
Sbjct: 102 KTRHDLGREAFLERAWQWKAESGGR-IVGQLRRLGYSVDWKRQRFTLDEGLSEAVKEAFV 160

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 161 RLHEQGLIYRGEY 173



 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 113/372 (30%), Gaps = 54/372 (14%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQ-AMMKIIRDDLKALNIQHDIFISEDD--FHRGDPS 271
           +  + +   F  ++W  + +D+        I R       I     ISE D  +    P 
Sbjct: 373 EALAQQDPRFLPDRWEKVYRDWLTDIRDWCISRQLWWGHRIPAWFVISETDGKYTDTTPY 432

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +         +     G     +             L   ST+   D D P    D + 
Sbjct: 433 VVARDEAEALEKAKAEYGAAAQIEQDEDVLDTWFSSGLWPFSTLGWPDADAP----DLNR 488

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y  + L         GFD +I+         V R+  +A A + +    +V +  LV  
Sbjct: 489 WYPTSTLVT-------GFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV-- 531

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RD    KMSK AG+ I    +++  G+D++RF ++        D      +++     V
Sbjct: 532 -RDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKKDTSATV 590

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVI 509
              +    +  +  R A                  Q  E D++ LQL     L+   RV 
Sbjct: 591 EASRNFANKLWNATRFALMN--------LGGETPAQLGEPDSAALQLADRWILSRLARVN 642

Query: 510 ENATIAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
                         Y        LY+ A +     +    +         +   L   R+
Sbjct: 643 RETADRYS-----NYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAAALADQRV 697

Query: 561 QLVHAVASIINS 572
                   ++  
Sbjct: 698 A-----KQVLAK 704


>gi|88809487|ref|ZP_01124995.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786706|gb|EAR17865.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 979

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 104/373 (27%), Gaps = 56/373 (15%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFHRGDPS 271
           +    +   F  E+W  + +D+        I   L     +     I  +   +    P 
Sbjct: 438 EALEKQDPRFIPERWEKVYRDWLTDIRDWCISRQLWWGHRIPAWFVISETGGQYTDTTPY 497

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGS 330
            +         +     G     +             L   ST+   D D   L +   +
Sbjct: 498 VVARNEAEALEKAKAEYGAAAEIEQDEDVLDTWFSSGLWPFSTLGWPDADSADLQRWYPT 557

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            T               GFD +I+         V R+  +A A + +    +V +  LV 
Sbjct: 558 STLVT------------GFD-IIFFW-------VARMTMMAGAFTGEMPFQDVYIHGLV- 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RD    KMSK AG+ I    ++D  G+D++RF ++        D      ++      
Sbjct: 597 --RDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKTDTSAT 654

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRV 508
           V   +    +  +  R A                  Q  E     LQL     L+   RV
Sbjct: 655 VEASRNFANKLWNATRFALMN--------LGGETPAQLGEPIPEALQLADRWILSRLARV 706

Query: 509 IENATIAQEPYKLAFY--------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                          Y        LY+ A +     +    +         +   L   R
Sbjct: 707 NRETAERYS-----SYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQR 761

Query: 560 LQLVHAVASIINS 572
           +        ++  
Sbjct: 762 VA-----KQVLAK 769



 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   ++     N TG +H+GH     + DT+      +G
Sbjct: 79  EARWQQAWDDQGAFHPDPKAPGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 138

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++   +  
Sbjct: 139 KNVLC--------------------------------LPGTDHASIAVQTILEKQLKEEG 166

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   + +L     +  ++  + I   L+ L    D          G    +++   
Sbjct: 167 KTRHDLGRDAFLERAWQWKAESGGR-IVGQLRRLGYSVDWKRQRFTLDEGLSEAVKEAFV 225

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 226 RLHEQGLIYRGEY 238


>gi|167036778|ref|YP_001664356.1| glutamyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115200|ref|YP_004185359.1| glutamyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687708|sp|B0KCH7|SYE1_THEP3 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|166855612|gb|ABY94020.1| glutamyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928291|gb|ADV78976.1| glutamyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 485

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 41/286 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTG +H+G+ R A+     +       ++     ++ R         +   L    +
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSS------KEFEELIFKEL 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P G Y       +  + A K   E   +   +     ++      
Sbjct: 63  EWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAY---RCYCTPEELEEDRR 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + R D+   + +      E +             +   R+G         P  +  + 
Sbjct: 120 KAVERGDIPCYSGRCRYLTKEQE-------------EAFIREGRKPVIRFIIPDDEVIEF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH 
Sbjct: 167 EDMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +   +  A+  +  +          L       K+SKR G+ 
Sbjct: 220 YNTPKQILIYKALGFEIPKFAH-----APLILGPDRTKLSKRHGNT 260


>gi|260437842|ref|ZP_05791658.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809867|gb|EFF69072.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 655

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 114/366 (31%), Gaps = 57/366 (15%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +     I    A  +G  H+G+    V+ D++A      GY+V  +   ++ G +I   
Sbjct: 1   MEKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMQGYDVRFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       +Q + N   ++         +  +     DK+      + E++   I K   
Sbjct: 61  AAEAGVTPKQFVDNVAGEIK-------RIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +    I +   + +     + F +E     G        +     + Y ++      + 
Sbjct: 114 DKG--DIYKGHYEGMYCTPCESFWTESQLVDGKCPDCGRKVKPAKEEAYFFKMSKYADRL 171

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD-- 350
                   +  Q + R   + ++   P             DL   +  ++ G    FD  
Sbjct: 172 IDYINEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDDR 221

Query: 351 NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +++YV                 G +   + K   A    + +   + + +   +  +  D
Sbjct: 222 HVVYVWLDALTNYITGLGYDCDGDNDELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALD 281

Query: 395 G--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                             KMSK  G+ I    + D  G D+VR+ +L            +
Sbjct: 282 LPLPKQVFGHPWLLQGGDKMSKSKGNVIYADDMADMFGVDAVRYFVLHEMPFENDGVITW 341

Query: 440 CKVKEQ 445
             V E+
Sbjct: 342 ELVVER 347


>gi|257424643|ref|ZP_05601070.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427311|ref|ZP_05603710.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429947|ref|ZP_05606331.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432649|ref|ZP_05609009.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435553|ref|ZP_05611601.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903117|ref|ZP_06311008.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904907|ref|ZP_06312765.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907857|ref|ZP_06315692.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910170|ref|ZP_06317974.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913362|ref|ZP_06321151.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918317|ref|ZP_06326054.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923279|ref|ZP_06330959.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957327|ref|ZP_06374780.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500408|ref|ZP_06666259.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509353|ref|ZP_06668064.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293523940|ref|ZP_06670627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257272213|gb|EEV04336.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275504|gb|EEV06977.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279144|gb|EEV09745.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282064|gb|EEV12199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284744|gb|EEV14863.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314147|gb|EFB44537.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317451|gb|EFB47823.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322394|gb|EFB52716.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325562|gb|EFB55870.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328241|gb|EFB58519.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331732|gb|EFB61243.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596072|gb|EFC01033.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790778|gb|EFC29593.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920903|gb|EFD97964.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095413|gb|EFE25674.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467450|gb|EFF09965.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
          Length = 471

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 113/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 4   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 61

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L     ++ E Y    +       +   
Sbjct: 62  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQTVPEIAEKYIAAFHEDVGALNVRKA 113

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    +  +  +KD   Q           A     D++     F  G        
Sbjct: 114 TSNPRVMDHMDDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       D P  +    +    +
Sbjct: 164 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECS 214

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 215 VMAFH----ELGATIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 266

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 267 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 319


>gi|167839949|ref|ZP_02466633.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 845

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 104/342 (30%), Gaps = 51/342 (14%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKT 298
             + R     + + + +  S+   H      + ++   + R G      L P +    + 
Sbjct: 477 WCVSRQRTWGVPLPYFVRRSDRSLHPQTARLVEEVAARVERDGIAAWTRLRPAELGVDEN 536

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             +   D   + F S  +   V R   + D                   G+   +Y+ G+
Sbjct: 537 EYEKLSDTLDVWFDSGSIHATVYRDAARPDAG-----------------GYPADLYLEGA 579

Query: 359 DHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+         A   +     +L    V    DG   KMSK  G+ ++ + +    
Sbjct: 580 DQHRGWFGSSLMTGCAADGRAPFRAILTHGFVV---DGAGRKMSKSLGNTVSPQQIASTR 636

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G+D +R  +     +  +     ++ E+  E         Y R R+  R       D D 
Sbjct: 637 GADILRLWIASTDYAAEMSIS-DEILERVVE--------TYRRIRNTLRFLLQNVADFDP 687

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ---EPYKLAF-YLYDLASVFH 533
           D    + +  E   D     L     E+     +A          +LA  Y    A    
Sbjct: 688 D---DDSVSAERLLDVDRYALARC-REFVDACRSAYARYDFLAVTRLAHGYC---AEELG 740

Query: 534 GHW-SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           G +    ++           R+          A+ S++ + L
Sbjct: 741 GFYLDALKDRLYASVADGVERRSAQT------ALRSVLANLL 776


>gi|317148029|ref|XP_001822455.2| glutamyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 612

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 115/350 (32%), Gaps = 42/350 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        D    I      ++   Q A
Sbjct: 52  APSPTGYLHLGSLRTALFNYLLA---KRTGGQFLLRIEDTDQKRTIPDAEQRLYEDLQWA 108

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y +     +   ++ +L+N     +        + A  +     
Sbjct: 109 GLQWDEGPNVGGSYGPYRQSERTAIYRTHARDLINNG-HAYRCFCSADRLDAFARHRSQ- 166

Query: 249 LKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMD 305
              L   +D   +E      +   +     +  L  +GY ++E I+     +      +D
Sbjct: 167 -AGLPPGYDRKCAEVSAEESEDRAAKGEAHVVRLKVEGYPMFEDIVYGKTGQNRSPNKLD 225

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
               ++         D  L+KSDG  TY    LA     +     ++I   G++      
Sbjct: 226 LIDRVYD--------DPILIKSDGHPTYH---LANVVDDHLMKITHVIR--GTEWMPSTP 272

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF--ITLRHVVDEVGSDSVR 423
              A+  A      +        V L  D    K+SKR  D      +       +  V 
Sbjct: 273 LHVALYNAFKWTPPRFGH-----VPLLVDKSGQKLSKRNADIDLTFFKDTQGVFAATLVN 327

Query: 424 FMML--WRKNSELLDFDFCKV-----KEQSKENPV------FYVQYAYAR 460
           F  L  W    +   F   ++      + +K N V      +++Q A+A+
Sbjct: 328 FAALLGWSHTQKSDIFSLEELEQIFNLKITKGNTVVAFEKLWFLQKAHAQ 377


>gi|313885240|ref|ZP_07818992.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619931|gb|EFR31368.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 929

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 93/299 (31%), Gaps = 62/299 (20%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQ 300
             +   IF +ED      P  I  +     + G            + EG   P       
Sbjct: 459 WGVPLPIFYAEDQTPIMTPETIEHVAQLFEKHGSNIWFEKTAKELLPEGFSHPGSPNGEF 518

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + D   + F S   G      L   D  Y  F ADL               Y+ GSD 
Sbjct: 519 TKENDIMDVWFDS---GTSYAGVLQTRD--YLDFPADL---------------YLEGSDQ 558

Query: 361 -SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             G+       + AV+ K     VL    V    DG  +KMSK  G+ I    +  E+G+
Sbjct: 559 YRGWFNSSFTTSVAVNHKPPYKAVLSQGFVM---DGNGMKMSKSLGNTILPADITKELGA 615

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           D +R  +        +      +K+ S+         AY + R+  R       D D + 
Sbjct: 616 DIIRLWVASVDYESDVRISKEILKQISE---------AYRKIRNTIRFMLSNVNDFDPEK 666

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538
              +      E    +  L   LA+Y  ++ +     E      Y       F   + +
Sbjct: 667 NQVD----YQELRPEDQYL---LAKYRVLVNDILEDYE-----RY------HFSSIYKN 707


>gi|238927712|ref|ZP_04659472.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884428|gb|EEQ48066.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 516

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 101/319 (31%), Gaps = 27/319 (8%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +G++V      ++ G +I   A        Q +  
Sbjct: 16  PSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQAAEKEGITPIQYVDR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMK 243
             +   E     G     +++       +          ++  +   +    Y       
Sbjct: 76  IVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIYKGEYKGLYCTPCESY 135

Query: 244 IIRDDLKALNIQHDIF-----ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             R  L       D       +SE+ +          ++  +       + +    +   
Sbjct: 136 WTRLQLDENGCCPDCHRPVQEVSEEAYFFRMSKYADRLLAYINEHPDFIQPVSRRNEMIA 195

Query: 299 TQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCK--YERGFDN 351
             +  ++   +   S   G     D      +  D    Y    + Y   K  + + +  
Sbjct: 196 FIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLTP-IGYLHDKEMFHKYWPA 254

Query: 352 MIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++++G +    +      +  A+     +       L+         KMSK  G+ +  
Sbjct: 255 DVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIV-----NGAKMSKSVGNVVDP 309

Query: 411 RHVVDEVGSDSVRFMMLWR 429
             +++E G+D++R+ +L  
Sbjct: 310 VALIEEFGADAIRYFLLRE 328


>gi|167622893|ref|YP_001673187.1| valyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167352915|gb|ABZ75528.1| valyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 971

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQNWEEKGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      +   E ++  + D+  Q+   I +  L+ L    D          G   
Sbjct: 93  KVAAEEGLSRHDLGRENFIDRIWDWKEQSGGTITKQ-LRRLGASVDWDRERFTMDEGMSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLE 187


>gi|86138837|ref|ZP_01057409.1| glutamyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824484|gb|EAQ44687.1| glutamyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 466

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 94/290 (32%), Gaps = 41/290 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 3   KPIVTRFAPSPTGYLHIGGARTALFNWLFAR---GRGGKFLLRIEDTDRARSTPEATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    N+D ++   +        V ++L  +       F  ++ +   +D +    
Sbjct: 60  LQGMNWLGLNHDGEIVSQFDGAKRHAEVAEQLLAE-GKAYKCFATQEEIAAFRDAA---- 114

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               + D K+   +     +  + H   P  IR                +  P+  +T  
Sbjct: 115 ----KADGKSTLFRSPWREAPAESHPDAPYVIR----------------IKAPQDGSTVI 154

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 155 KDQVQGDVTIRNDQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+        + +   + L       K+SKR G      
Sbjct: 207 NNAARQMVIYDAMGWD-----IPVWAHIPLIHGADGKKLSKRHGALGAQE 251


>gi|317484769|ref|ZP_07943668.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923976|gb|EFV45163.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 836

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +     S   +   Y  ++     K  +  +   P+G +H+GH R   +GD +A
Sbjct: 6   RYDPAAIETKWQSRWENEKTYACHVDKDKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVA 65

Query: 152 SLMAFSGYEVT 162
                 G+ V 
Sbjct: 66  RFKRMQGFNVM 76



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 10/95 (10%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELV---RLYRDGMPIKMSKRAGD 406
           Y+ G +H+     Y +    V   +     +I+     L+    + +DG   KMSK  G+
Sbjct: 538 YIGGVEHAILHLLYARFFTKVLRDLGYFPKEIDEPFANLLTQGMVLKDG--SKMSKSKGN 595

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    ++ + G+D+VR   L+    E  DFD+  
Sbjct: 596 TVDPTEMIAKYGADTVRLFCLFAAPPER-DFDWSD 629


>gi|303249052|ref|ZP_07335296.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489575|gb|EFL49516.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 889

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +  G G   +I     N TG +H+GH     + D L    
Sbjct: 12  PADVEARWIKYWQEDKTFTPDPDGPGEPYSIVIPPPNVTGALHMGHALNITIQDILCR-- 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                     Y+                 R +  L+   +D        V  + +  +  
Sbjct: 70  ----------YH---------------RQRGRNVLWVPGTDHAGIATQNVVERSLAAKGV 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            + +     F EE W    +      ++  IR     L    D       F  G    +R
Sbjct: 105 SREAIGREAFIEEVW--KWRAEYGGKILNQIR----RLGASVDWTRERFTFDEGLSRAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +G +Y G
Sbjct: 159 EVFVRLYEEGLIYRG 173


>gi|225449565|ref|XP_002279143.1| PREDICTED: similar to AT3g55400/T22E16_60 [Vitis vinifera]
          Length = 555

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 125/379 (32%), Gaps = 62/379 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D +A     SG +V      ++ G +I T A +           
Sbjct: 79  VNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIATAAAAC---------- 128

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
             S   E             +  D    + +     K   IVK++   V A   I R D 
Sbjct: 129 -GSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDIYRADY 187

Query: 250 KALN-IQHDIFISEDDFHRG--DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           + L  I  + +  +     G  D S  R  +D          GI  P  +K T     D 
Sbjct: 188 EGLYCINCEEYKVQSWIKSGLRDFSISRASVD---------WGIPVPNDNKQTIYVWFD- 237

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD----HSG 362
             LL   + + +D ++P L+S  S  + A+                ++++G D    H+ 
Sbjct: 238 -ALLGYISALSEDNEQPDLQSAVSSGWPAS----------------LHLIGKDILRFHAV 280

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           Y     A+  +      ++         L +DGM  KM K  G+ +    +V   GSD+V
Sbjct: 281 Y---WPAMLLSAGLSLPKMVFGHGF---LTKDGM--KMGKSLGNTLEPNDLVQRFGSDAV 332

Query: 423 RFMMLWR---KNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           R+  L      N      D F  +      N +  +     R   + ++       +D  
Sbjct: 333 RYFFLREVEFGNDGDYSEDRFINIVNAHLANTIGNLL---NRTLGLLKKNCQSTLAVDST 389

Query: 479 LFPRNVIPQESEFDTSELQ 497
           L       +++     E  
Sbjct: 390 LAAEGNAFKDTVDKLVEKA 408


>gi|153838772|ref|ZP_01991439.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747804|gb|EDM58694.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 942

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+        VL    V    DG   KMSK  G+ +  +
Sbjct: 563 LYLEGSDQHRGWFQSSLISSIAMKGVAPYKQVLTHGFVV---DGHGRKMSKSIGNVVAPK 619

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 620 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FF 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +L+      +++P E         +   LA    +I  A      + +  
Sbjct: 668 LANLNGFNPATDIVPAEEMVALDRWAVGRALAAQEEII-KAYDEYNIHAVTQ 718


>gi|170725421|ref|YP_001759447.1| valyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169810768|gb|ACA85352.1| valyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 966

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQNWEEKGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      +   + ++  + D+  ++   I +  L+ L    D          G   
Sbjct: 93  KVAAEEGLNRHDLGRDAFIDRIWDWKNESGGTITKQ-LRRLGASVDWDRERFTMDEGMSD 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G        T      D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPTLHTAISDLE 187


>gi|76163071|gb|AAX30840.2| SJCHGC08111 protein [Schistosoma japonicum]
          Length = 60

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360
           +V   ++KSDGS+TY  +DL     + +E   D ++YV+ +  
Sbjct: 9   EVPLTVVKSDGSFTYDTSDLTALLHRLHEEKADWVLYVVDNGQ 51


>gi|260892210|ref|YP_003238307.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864351|gb|ACX51457.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 882

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 54/211 (25%), Gaps = 33/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +          G  +   +        I     N TG +H+GH     + D L    
Sbjct: 12  PKEVEAKWYRFWEEGKFFRGEVDPSRRPFCIVMPPPNVTGELHMGHALDNTLQDVLIRWR 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG       ++   R +  L                         
Sbjct: 72  RMQGYTTLWVPGTDHAG-------IATQARVEAEL------------------------- 99

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   EK+L  V  +  +     I   L+ L    D          G    ++
Sbjct: 100 AKEGLSRHDLGREKFLERVWQWK-EKYGNTITMQLRRLGASCDWDRERFTMDEGCSRAVK 158

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++   L  +G +Y G          Q    D
Sbjct: 159 EVFIRLYEEGLIYRGDYIVNWCPHCQTVISD 189



 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 83/228 (36%), Gaps = 48/228 (21%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +            V +  LV    D +  KMSK  G+ +    V++  G+DS+
Sbjct: 493 WVARMIFMGLKFMGDVPFREVFIHGLV---LDALGRKMSKSLGNGVDPLEVIESHGADSL 549

Query: 423 RFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           RFM++        L F F ++                   R+   +  +    +  +L  
Sbjct: 550 RFMLVTGNTPGNDLRFHFERLD----------------GARNFINKLWNASRFVLMNLDE 593

Query: 482 RNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFYL--YDL---ASVFHG 534
              +P+  E     L+L+    ++    V+E         ++  YL  Y+L   A + + 
Sbjct: 594 GESLPRLGEVR---LELVDRWIISRLQDVVE---------RVTAYLEEYELGEAARLLYE 641

Query: 535 H-WSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             W        E  +LR   ++       ++ L     S++ + L ++
Sbjct: 642 FIWDEFCDWYIEMAKLRLYGSDPEARRTAQVVL----KSVLGTCLKLL 685


>gi|256855023|ref|ZP_05560384.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256709536|gb|EEU24583.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
          Length = 470

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|38234357|ref|NP_940124.1| valyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401320|sp|Q6NFV0|SYV_CORDI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|38200620|emb|CAE50316.1| valyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 919

 Score = 48.0 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K L    V    +  +        +I     N TG +H+GH     + D +A  
Sbjct: 30  DPQAVEKDLYEGWVEKGYFTADPSSSKPAFSIVLPPPNVTGQLHMGHALDHTLMDGIARR 89

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++   + +  L   +      Y    +++HV  E 
Sbjct: 90  KRMQGYEVL-------WLPGMDHAGIATQTKVEAMLKETEGKSRWDYSREEFIEHV-WEW 141

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K+                           I   ++A+    D          G    +
Sbjct: 142 KRKFG------------------------GTIGTQMRAIGDSVDWSRERFTLDEGLSRAV 177

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   +  +G +Y+       S   +    D
Sbjct: 178 QTIFKQMYDRGMIYQANRLVNWSPILETAVSD 209


>gi|293400415|ref|ZP_06644561.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306815|gb|EFE48058.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 439

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 123/366 (33%), Gaps = 58/366 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL       GY+V       D   +I  +A                  
Sbjct: 30  HIGNARPIVVFDTLKRTFQALGYKVKMVSNYTDVDDKIIKVAKEC--------------- 74

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLN----FPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 GV  K + ++    Y+ + L      P+          ++ A ++++     A 
Sbjct: 75  ------GVSEKEITEKFIKAYNDDRLALHAMMPDAAPRVTETMDAIIAFIELLVKKGHAY 128

Query: 253 NIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            I  D++    S + + +     I D++           G      SK     D      
Sbjct: 129 EIDGDVYFRVNSVESYGKLSNQQIDDLM----------VGARIDENSKKENPLDF----T 174

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE- 368
           L++ T  G   + P   S G   +    +       E   ++ I + G          E 
Sbjct: 175 LWKRTDEGIQWNSPW--SVGRPGWHTECVVMIN--KEFHGEHTIDIHGGGMDLKFPHHEN 230

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            +A + +  +  I         +  DG   KMSK  G+ I  + +++++G + +R++ L 
Sbjct: 231 EIAQSRAAYETPIANYWIHNGMVNIDGE--KMSKSLGNVIWAKDMIEKIGGNVLRWVFLS 288

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                 L+ +   ++   KE     +Q    + ++  +QA       D ++         
Sbjct: 289 AHYRSPLNINEEAIETAKKE-----LQ----KVQTSLKQAYVKLALADVEITDEAEDTLL 339

Query: 489 SEFDTS 494
           + F  +
Sbjct: 340 TPFMDA 345


>gi|260654931|ref|ZP_05860419.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630246|gb|EEX48440.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 918

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 83/244 (34%), Gaps = 50/244 (20%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G+D   G+ +     + AV+ K     VL         DG   KMSK  G+ ++ +
Sbjct: 558 LYLEGADQHRGWFQTSLLASVAVTGKSPYKAVLTHGFFM---DGEGRKMSKSLGNVVSAQ 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +V++ G+D +R  +        +   +  V    +         +Y R R+  R     
Sbjct: 615 KIVEKYGADILRLWVASTDYRSDMRISYKIVDSLVE---------SYRRIRNTARYLLGN 665

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE------P----YKL 521
               +      + +P E   +     L +      R I   T + E      P    ++L
Sbjct: 666 LHGFNPS---TDRVPYEKMGEFDRWVLALL----NRTIRRVTESYENYEFHIPTMTIHQL 718

Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581
              + +L+SV+             +     + +    R     A  +++     ++   +
Sbjct: 719 C--VNELSSVY---------LDVNKDRLYADPENDTAR----RATQTVMW---ELL--TT 758

Query: 582 PNEM 585
              M
Sbjct: 759 LTRM 762


>gi|225869302|ref|YP_002745250.1| glutamyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702578|emb|CAX00582.1| glutamyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 481

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 99/293 (33%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +     L  +Y  +LL           K Y  +
Sbjct: 57  RSQLENLKWLGIDWDESPETHER--YRQSERLALYQQYIDQLLAEG-----KAYKSYVTE 109

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R+  +A   +   +++E  +           I      G V    L   ++   
Sbjct: 110 EELAAERERQEAAG-ETPRYVNE--YLGMSADEKAAYIAEREAAGIVPTVRLAVNEAGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  ++F    VG   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWTDMVKGDIVFEGGNVG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +      +   +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAP----IFGHMTLIINSETGKKLSKRDTNTLQFIE 268


>gi|229917422|ref|YP_002886068.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468851|gb|ACQ70623.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 653

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 109/365 (29%), Gaps = 118/365 (32%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V GD +A      G++V                      RY   L  
Sbjct: 15  PSAKLHIGHAYTTVAGDAIARYKRLKGFDV----------------------RY---LTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D         G  +    +E A +       F             V  +++ I+     
Sbjct: 50  TDE-------HGQKI----QEKAKEAGVTPQAF-------------VDEVVEEIKVLWDR 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           L I +D +I            +  + + L + G +Y G      S   +    + + +  
Sbjct: 86  LEISYDDYI--RTTEDRHKKVVEHVFETLLKNGDIYLGEYEGWYSVPDETYYTESQLVDG 143

Query: 312 RSTMVGDDVD---------RPLLKSDGSYTYF------------------------AADL 338
           +S   G  V+         R    +D    YF                          DL
Sbjct: 144 KSPDSGHPVELVREECYFFRLSKYADRLIEYFESHPDFILPESRKTEMINNFLKPGLQDL 203

Query: 339 AYFKCKYERG------FDNMIYVM-------------GSDHSGYVKRLE-AVAAAVSEKK 378
           A  +  ++ G        +++YV              G+D+     R   A    V ++ 
Sbjct: 204 AVSRTTFDWGVQVPSNPKHVVYVWVDALTNYISSLGYGTDNDELFNRYWPADVHLVGKEI 263

Query: 379 AQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + ++   + +  D                  KMSK  G+ +    ++D  G DSVR+
Sbjct: 264 VRFHTIIWPALLMALDLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPIPLIDRYGLDSVRY 323

Query: 425 MMLWR 429
            +L  
Sbjct: 324 YLLRE 328


>gi|54023315|ref|YP_117557.1| valyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81823205|sp|Q5Z048|SYV_NOCFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|54014823|dbj|BAD56193.1| putative valyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 893

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 72/241 (29%), Gaps = 42/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +    VS   +  +        +I     N TG +H+GH     + DTLA  
Sbjct: 21  DPSAVEAEMYERWVSAGYFTADPASGKPAYSIVLPPPNVTGTLHMGHALDHTLMDTLARR 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 81  KRMQGYEVL-------WLPGMDHAGIATQTVVEKQLAVD--------------------- 112

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++   I    ++AL    D          G    +
Sbjct: 113 ----GKTKEDFGRELFVEKVWDWKRESGGAIQWQ-MRALGDGVDWSRDRFTMDEGLSRAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + +   L   G +Y        S   +           D++ + +  R   + DD    +
Sbjct: 168 QTMFKRLYDAGLIYRAERLVNWSPELRTAISDIEVKHEDVEGELVSLRYGSLNDDEPHVV 227

Query: 325 L 325
           +
Sbjct: 228 V 228


>gi|28897308|ref|NP_796913.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363892|ref|ZP_05776640.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876271|ref|ZP_05888626.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|81728462|sp|Q87S90|SYI_VIBPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28805517|dbj|BAC58797.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308092895|gb|EFO42590.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308112965|gb|EFO50505.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 942

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+        VL    V    DG   KMSK  G+ +  +
Sbjct: 563 LYLEGSDQHRGWFQSSLISSIAMKGVAPYKQVLTHGFVV---DGHGRKMSKSIGNVVAPK 619

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 620 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FF 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +L+      +++P E         +   LA    +I  A      + +  
Sbjct: 668 LANLNGFNPATDIVPAEEMVALDRWAVGRALAAQEEII-KAYDEYNIHAVTQ 718


>gi|328353003|emb|CCA39401.1| valyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 1047

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 47/194 (24%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+    +   +                 +I     N TG +H+GH     + DTL     
Sbjct: 98  SWYEWWVKEGLFEPEFGPDGKPKPAGVFSIPAPPPNITGALHIGHALTIALQDTLIRFYR 157

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W                                
Sbjct: 158 MKGKTTLYLPGFDHAGIATQSVVEKSLW-------------------------------A 186

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +      +   EK++  V D+        IR   + L   +D        +      + +
Sbjct: 187 QEGKTRHDLGREKFIEKVWDWK-DVYQNRIRSQFEKLGASYDFSREAFTLNPMLSKAVTE 245

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 246 AFVRLHEDGTIYRA 259


>gi|260903301|ref|ZP_05911696.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107941|gb|EFO45481.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 942

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+        VL    V    DG   KMSK  G+ +  +
Sbjct: 563 LYLEGSDQHRGWFQSSLISSIAMKGVAPYKQVLTHGFVV---DGHGRKMSKSIGNVVAPK 619

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 620 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FF 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +L+      +++P E         +   LA    +I  A      + +  
Sbjct: 668 LANLNGFNPATDIVPAEEMVALDRWAVGRALAAQEEII-KAYDEYNIHAVTQ 718


>gi|189502590|ref|YP_001958307.1| valyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|254783549|sp|B3ETM6|SYV_AMOA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189498031|gb|ACE06578.1| hypothetical protein Aasi_1256 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 877

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 66/236 (27%), Gaps = 33/236 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +   S  +S   +  +   +     I     N TG +H+GH     + D L   
Sbjct: 8   NPIEVEQKWYSHWMSQGFFKASPHSEKEPYTIVLPPPNITGVLHMGHVLNTTLQDVLIRK 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E      I+ A   I T    V     + +   D                  E 
Sbjct: 68  ARMQGKEACWVPGIDHA--SIATETKVVAMLQAKGIQKKD-------LTREAFLAHAWEW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY S                        II + +K L    D          G    +
Sbjct: 119 KEKYGS------------------------IILEQIKQLGASCDWDRLHFTMDAGPSEAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           + +   L  +GY+Y+G          +    D +      +     V   ++ SD 
Sbjct: 155 KKVFIQLYEKGYIYQGKRMINWDPVGKTALADDEVNYQPVSSKLYYVRYAIVGSDQ 210


>gi|88706623|ref|ZP_01104326.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699119|gb|EAQ96235.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 714

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 84/252 (33%), Gaps = 47/252 (18%)

Query: 336 ADLAYFKCKYERGFDNMIY-VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            D+A F   ++ G D  +Y  +G D    H  +     A+  A   +      +      
Sbjct: 295 RDIA-FDDFWQPGGDTELYHFVGKDIINFHGLF---WPAMLHAAELRTPTGVFVHGF--- 347

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  DG   KMSK  G FI   H +  + ++ +R+    + ++ + D D        + N 
Sbjct: 348 LTVDGT--KMSKSRGTFINAHHYLQHLDAEYLRYYFAAKLSAGVDDIDLNLEDFVQRVNS 405

Query: 451 --VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
             V  V    +RC    R+  +                       SE +L   LA +   
Sbjct: 406 DVVGKVVNIASRCAGFLRKGFENRTSERC----------------SEPEL---LASFGEA 446

Query: 509 ---IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
              I  A   +E  K    + +LA   + +    +      +V A         +QLV +
Sbjct: 447 GTEIAQAYEDREFSKAIRLIMELADRANQYIDQHK-----PWVMAKEPG-QAADVQLVCS 500

Query: 566 VASIINSGLNII 577
                 +   ++
Sbjct: 501 TGI---NCFRLL 509


>gi|323443098|gb|EGB00718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 466

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 107/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRIF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +         A SE    +      +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH----HENEIAQSEAHNHVPFANYWMHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|300988164|ref|ZP_07178584.1| valyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300305974|gb|EFJ60494.1| valyl-tRNA synthetase [Escherichia coli MS 200-1]
          Length = 667

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|260772179|ref|ZP_05881096.1| valyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260613046|gb|EEX38248.1| valyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 952

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTAIEQALYQTWEENGYFKPHGDTSKPAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++    I   L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKAESG-GTITQQLRRLGASVDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLHEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|145300684|ref|YP_001143525.1| valine tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853456|gb|ABO91777.1| valine tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 954

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             + + + + L     +   +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TFNHNAIEQALYQHWEAQGYFKPHGDTSKDSFCIMIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYNRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  S
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKEESGGTITRQ-MRRLGDSVDWERERFTMDEGLSS 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L   G +Y G               D +
Sbjct: 152 AVQEVFVRLYEDGLMYRGKRLVNWDPKLNTAISDLE 187


>gi|78185780|ref|YP_378214.1| valyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78170074|gb|ABB27171.1| Valyl-tRNA synthetase, class Ia [Synechococcus sp. CC9902]
          Length = 925

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 55/193 (28%), Gaps = 34/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +    G  +      +G    +     N TG +H+GH     + DT+      +G
Sbjct: 26  ARWQKAWEEQGAFHPDPAA-EGEPFAVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAG 84

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++   +  
Sbjct: 85  KNVLC--------------------------------LPGTDHASIAVQSILEKQLKEEG 112

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L     +  ++  + I   L+ L    D          G    +++   
Sbjct: 113 KTRHDLGREAFLERAWQWKAESGGR-IVGQLRRLGYSVDWKRQRFTLDEGLSEAVKEAFV 171

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 172 RLHEQGLIYRGEY 184



 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 99/294 (33%), Gaps = 30/294 (10%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQ-AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           +  + +   F  ++W  + +D+        I R       I     ISE D    D +P 
Sbjct: 384 EALAEQDPRFLPDRWEKVYRDWLTDIRDWCISRQLWWGHRIPAWFVISETDGKYTDTTPY 443

Query: 274 ---RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
              RD  + L +    Y       + +             F +    D     L +   +
Sbjct: 444 VVARDEAEALQKAKAEYGAAAQIEQDEDVLDTWFSSGLWPFSTLGWPDANAPDLNRWYPT 503

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            T               GFD +I+         V R+  +A A + +    +V +  LV 
Sbjct: 504 STLVT------------GFD-IIFFW-------VARMTMMAGAFTGEMPFKDVYIHGLV- 542

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RD    KMSK AG+ I    +++  G+D++RF ++        D      +++     
Sbjct: 543 --RDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKKDTSAT 600

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           V   +    +  +  R A     +L  +   +   P  +    ++  ++  LA 
Sbjct: 601 VEASRNFANKLWNATRFA---LMNLGGETPAQLGDPDPAALQLADRWILSRLAR 651


>gi|262274901|ref|ZP_06052712.1| isoleucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221464|gb|EEY72778.1| isoleucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 942

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 110/329 (33%), Gaps = 50/329 (15%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  E A   +  L      +W+P      ++AM++      I R     + I   +   
Sbjct: 427 FISMEKAGLRAKALEEIKNVQWIPEWGQNRIEAMVEGRPDWCISRQRTWGVPIALFVHKE 486

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD----MDRKQLLFRSTMVG 317
             + H      I  +   + + G      L P +    +  +    +D   + F S    
Sbjct: 487 TAELHPDTVELIEKVAQKVEQSGIQAWWDLDPEELLGAEAANYEKVLDTLDVWFDS---- 542

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
                      G+  Y     A    + E  G +  +Y+ GSD   G+ +     + A+ 
Sbjct: 543 -----------GATHY-----AVVNQREEFAGQEADMYLEGSDQHRGWFQSSLMTSVAIK 586

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
                  VL         DG   KMSK  G+ I+ + V++++G D +R  +     +  +
Sbjct: 587 NHAPYKQVLTHGF---TVDGQGRKMSKSIGNVISPQDVMNKLGGDILRLWVASTDYTGEM 643

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                ++ ++S +        AY R R+  R    +  +L+      +++  E       
Sbjct: 644 TVS-DEILKRSAD--------AYRRIRNTAR---FLLANLNGFNPETDLVAAEDLVVADR 691

Query: 496 LQLIVHL-AEYPRVIENATIAQEPYKLAF 523
             +   L A+    I  A      + +  
Sbjct: 692 WAVGKALEAQ--EEIIKAYDECNFHAVTQ 718


>gi|224541065|ref|ZP_03681604.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525989|gb|EEF95094.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM
           15897]
          Length = 642

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 140/427 (32%), Gaps = 83/427 (19%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    V+ D +       GY V  +   ++ G +I   A              
Sbjct: 17  SGKPHIGNTYEIVLSDAICRAKRQQGYNVRFQTGTDEHGQKIELKAKEA----------- 65

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--DLK 250
                 G  P  Y+  V  E+  K   ++++   +K++    +Y V+ + KI +   D  
Sbjct: 66  ------GIEPKEYVDKVAAEV--KRIWDMMDVTYDKFIRTTDEYHVKQVQKIFKKLHDKG 117

Query: 251 ALNIQH---------DIFISEDDFHRGD----PSPIRDIIDNLARQGYV-YEGILPPPKS 296
            + + H         + F +E     G        + D  +         Y+  L    +
Sbjct: 118 DIYLGHYEGKYCTACESFFTESQLVDGKCPDCGGEVHDAKEEAYFFKLSKYQDRLMQYYN 177

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
              +    + ++    +  +   + + L  S  S+T+            +    +++YV 
Sbjct: 178 DHPEFIQPESRKNEMVNNFLKPGL-QDLCVSRTSFTWSIP--------VDFDPKHVVYVW 228

Query: 357 ----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
                           G++   + +   A    + +   + + +   ++ +  D      
Sbjct: 229 IDALVNYITGLGYDLDGNNDELFNRYWPADVHVIGKDIVRFHTIYWPIILMALDLPLPKQ 288

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQ 445
                       KMSK  G+ I    +VD  G D+VR+ +L            +  + E+
Sbjct: 289 VFGHPWLLMGDSKMSKHLGNVIYADDLVDLFGVDAVRYYLLHEIPYDNDGSITWDLLVER 348

Query: 446 SKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVI-PQESEFDTSELQ 497
              +    +     R  ++  +  D       +   +D +L    +  P+++    +E +
Sbjct: 349 INSDLANILGNLVNRTIAMCNKYFDGVVTNTNVCEPVDDELKSIALAMPEKTIKLENEFK 408

Query: 498 LIVHLAE 504
           L   L E
Sbjct: 409 LAKALDE 415


>gi|206890484|ref|YP_002248496.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742422|gb|ACI21479.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 915

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 28/186 (15%)

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           Y+ GSD      +   +A+  ++ KA   ++L        DG   KMSK  G+ I+ + +
Sbjct: 558 YLEGSDQHRGWFQSSLIASLGNKGKAPYKIVLTHG--FTVDGQGRKMSKSLGNVISPQEI 615

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +   G+D VR  +      + +      ++  ++         AY + R+  R       
Sbjct: 616 IKSNGADIVRLWVSAEDYRDDIKLSQEILQRLTE---------AYRKIRNTLRYLLGNIY 666

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533
           D D   +   ++  +        +LI         +  A    E +++          FH
Sbjct: 667 DYDAKDYTDQLLEIDRWAMMRLQKLIGK-------VRLAYENFEFHQV----------FH 709

Query: 534 GHWSHG 539
             ++  
Sbjct: 710 AIYNFC 715


>gi|323439800|gb|EGA97517.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 466

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|308452471|ref|XP_003089058.1| hypothetical protein CRE_18338 [Caenorhabditis remanei]
 gi|308243470|gb|EFO87422.1| hypothetical protein CRE_18338 [Caenorhabditis remanei]
          Length = 698

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 103/349 (29%), Gaps = 59/349 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K           +      KG    I     N TG +H+GH     + 
Sbjct: 7   NIATTYDPTEIEKKWYKTWEEKGYF--QPSRKGDSFCIMIPPPNVTGSLHMGHGFNNAIM 64

Query: 148 DTLASLMA-----FSGYEVTREYYINDAGAQI----------NTLALSVFWRYQQALYNN 192
           D L           +  ++  +        QI          +   + +        Y  
Sbjct: 65  DALTRYNRMSERFAARKKLVAQAEAEGWLDQIQPYTLKPPRGDRSGVIIEPLLTDQWYVK 124

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
            + L E     V    +   + ++YS+  +      W+  ++D+ +   +          
Sbjct: 125 IAPLAEPAIKAVKDGDIKF-VPEQYSNMYM-----AWMNNIQDWCISRQLWWGHRIPAWY 178

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           + + +I++   +             + +  +  +   I                      
Sbjct: 179 DAEGNIYVGRSE-------------EEVRAKNNIAADIELNQDEDVLDTWFSSGLWTFST 225

Query: 313 STMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLE 368
               GD+  D+     +   T+   D+         GFD +I+   +     + +  + E
Sbjct: 226 LGWTGDEAKDKENYFLN---TFHPTDV------LVTGFD-IIFFWVARMIMMTMHFMKNE 275

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                V  K   ++        L RDG   KMSK  G+ +    ++D V
Sbjct: 276 DGTPQVPFKTVYVH-------GLVRDGEGQKMSKSKGNVLDPLDLIDGV 317


>gi|134093543|ref|YP_001098618.1| valyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166225522|sp|A4G1V2|SYV_HERAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|133737446|emb|CAL60489.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Herminiimonas
           arsenicoxydans]
          Length = 969

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 58/337 (17%), Positives = 99/337 (29%), Gaps = 55/337 (16%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ +     +       Y           +I+    N TG +H+GH     + D L  
Sbjct: 7   FDPADIEAFWRTEWEKRGYYTATTDADKPSFSIQLPPPNVTGTLHLGHGFNQTIMDGLTR 66

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G+        + AG  I T  +       Q +  +D                   
Sbjct: 67  YHRMRGFNTAWIPGTDHAG--IATQIVVERQLDAQKITRHD------------------- 105

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                         EK++  V ++  ++    I   ++ L    D               
Sbjct: 106 -----------LGREKFIEKVWEWKEKSG-STITGQMRRLGTSPDWSREYFTMDEPRSKV 153

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           + ++   L  QG +Y G               D + +         ++  PL  +DGS T
Sbjct: 154 VTEVFVRLVEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGHMWNIRYPL--ADGS-T 210

Query: 333 YFAADLAY-----FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           Y    +AY          ER F     V+ +        L  VA AV     +   L+ +
Sbjct: 211 YKFP-IAYDEAGNATEWEERNF----IVVATTRPE--TMLGDVAVAVDPDDERYTHLVGK 263

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           L+ L        +  RA   I   +V  E G+  V+ 
Sbjct: 264 LLTLP-------LCDRAIPIIADDYVDKEFGTGCVKI 293


>gi|309389514|gb|ADO77394.1| valyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 884

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 34/191 (17%)

Query: 100 KILSSIVVSGIEYGRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           K  +  + +     R     +    +I     N TG +H+GH     + D L       G
Sbjct: 16  KWYNYWLENNYFAPREESETEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y               +  +++   +    L        E      +L     E  ++Y 
Sbjct: 76  YRSL-------WLPGTDHASIATEVKVVNKLREEGIA-KEDITREEFL-EKAWEWKEEYG 126

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           + + N                         LK +    D         +G    + ++  
Sbjct: 127 TRITNQ------------------------LKKMGSSCDWSRERFTLDQGCSDAVEEVFI 162

Query: 279 NLARQGYVYEG 289
            L  +G +Y+G
Sbjct: 163 KLYEEGLIYQG 173


>gi|150021444|ref|YP_001306798.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793965|gb|ABR31413.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 866

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 33/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + K      +    +         K +I     N TG +H+GH     + D L    
Sbjct: 11  PNSIEKKWYKFWLEKGYFTPQNDNSRPKYSIVIPPPNITGKIHMGHALNITLQDILTRYK 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +G++                                   LP   + G+  +   ++  
Sbjct: 71  RMNGFKTL--------------------------------WLPGEDHAGIATQTAVEKKI 98

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +K   +  +   +K+L IV D++     K I+  + A+    D          G    ++
Sbjct: 99  EKEGKKREDLGRKKFLEIVWDWA-STYRKTIKQQIMAIGASVDWSRERFTLDEGLSKAVK 157

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L ++G +Y+G          +    D +
Sbjct: 158 KVFVSLYKKGLIYKGKYIVNWCPRCKTVLSDEE 190



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 89/239 (37%), Gaps = 52/239 (21%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     ++K   +V + +LV   RD    KMSK  G+
Sbjct: 484 TGFD-IIFFW-------VARMIMMGYEFMDEKPFSDVYIHQLV---RDKFGRKMSKSLGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    V++E G+D +RF  L    ++  D       +  + +  F  +   A    I  
Sbjct: 533 GIDPIEVIEEYGADPMRFS-LSTLAAQGRDIKLDL--KHIETSKKFANKIWNATRFVILN 589

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
              + F   D D    +                  L+   + I+N T     + +  Y +
Sbjct: 590 --LEDFQKQDLDNLNLSDKWI--------------LSRLQKTIKNVT-----HAIENYEF 628

Query: 527 DLASV--FHGHWSHGRENPRLRFVQANNRKLTMMRLQ-----LVHAVAS-IINSGLNII 577
           ++A+   ++  W    +            +++  RL+     LV  V   ++++ L ++
Sbjct: 629 NVAAKEIYNFFWDELCDWYI---------EISKPRLKTNERSLVQNVLVYVLDNSLKLL 678


>gi|150396508|ref|YP_001326975.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028023|gb|ABR60140.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 516

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 66/451 (14%), Positives = 127/451 (28%), Gaps = 73/451 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G EV      ++ G ++   A       Q+    
Sbjct: 16  PNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQTAKKEGISPQELAAR 75

Query: 192 NDSDLPEGYY-----PGVYLKHVGKELADKYSSELLNFPEEK---------WLPIVKDYS 237
           N ++              +++   K   +   +      E           W  +  +  
Sbjct: 76  NSAEFQNMARLLNASNDDFIRTTEKRHHEASQAIWTRMGEAGDLYKDSYAGWYSVRDEAY 135

Query: 238 VQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
            Q     +R+D      Q     ++ E+ +     +    ++ +                
Sbjct: 136 YQENETELREDGLRYGPQGTPVEWVEEESYFFRLSAYQDRLLKHYEENPDFIGPAERRNE 195

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC----KYE 346
           +        +   + R    +   +  D      +  D    Y  A   Y       + +
Sbjct: 196 VISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYVTA-TGYLTDPTGPRAK 254

Query: 347 RGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
               N I+V+G D    H+ Y     A   +      +       L+         KMSK
Sbjct: 255 FWPAN-IHVIGKDIIRFHAVY---WPAFLMSAGLPLPKRVFAHGFLLN-----KGEKMSK 305

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV-------- 454
             G+ +   ++V+  G D +R+  L        +  F +    S+E     +        
Sbjct: 306 SLGNVVDPFNLVEHFGLDQIRYFFLR-------EVSFGQDGSYSEEGIATRINSDLANGI 358

Query: 455 -QYAYARCRSIFRQAKDIFP------DLDFDLFPRNVIPQESEFDTSELQLI-VHLAEYP 506
              A      I +      P      D D  +        E+  +    QLI   LA   
Sbjct: 359 GNLASRSLSMIVKNCDGQIPVCGPLTDEDKAMLAAADSLIETAREEMGRQLIHRALAATI 418

Query: 507 RVIEN-----------ATIAQEPYKLAFYLY 526
            ++             A    +P ++A  LY
Sbjct: 419 AIVSETDRYFAGQEPWALKKTDPNRMATVLY 449


>gi|169625688|ref|XP_001806247.1| hypothetical protein SNOG_16120 [Phaeosphaeria nodorum SN15]
 gi|111055372|gb|EAT76492.1| hypothetical protein SNOG_16120 [Phaeosphaeria nodorum SN15]
          Length = 543

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 98/293 (33%), Gaps = 50/293 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R   + DA      L   + 
Sbjct: 55  APSPTGYLHLGSLRTALFNYLLAKRTGGQFLLRIEDTDQKRT--VPDAER---RLFEDLR 109

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKD 235
           W   Q     + + P     G Y +    E+  K++ +LL+       F   + L  + +
Sbjct: 110 WAGLQWDEGPEVEGP----YGPYKQSERSEIYKKHAQQLLDTGHAYRCFCSSERLNALAE 165

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII-DNLARQGYVYEGILPPP 294
           +  +  +     D            S+D  H+G+   IR  + D   +   +  G   P 
Sbjct: 166 HKHKLGLAT---DYDRTCADMAKEESDDRAHKGESHTIRLKVPDQYPKYHDLVYGTFKPL 222

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           K +                       D  LLKSDG  TY    LA     +     ++I 
Sbjct: 223 KKRGHVV--------------ESSFEDPILLKSDGLPTYH---LANVVDDHLMKITHVIR 265

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             G +      +  A+ +A      +        V L  D    K+SKR  D 
Sbjct: 266 --GLEWMPSTPKHIAMYSAFGWTPPEFAH-----VGLLVDEHGNKLSKRNFDT 311


>gi|312959164|ref|ZP_07773683.1| valyl-tRNA synthetase, class Ia [Pseudomonas fluorescens WH6]
 gi|311286934|gb|EFQ65496.1| valyl-tRNA synthetase, class Ia [Pseudomonas fluorescens WH6]
          Length = 948

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L      R  +A   N  DL                  
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQMLV----ERQLEATGQNRHDL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|307296635|ref|ZP_07576455.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306495971|gb|EFM65559.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315029626|gb|EFT41558.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 478

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|325982869|ref|YP_004295271.1| isoleucyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532388|gb|ADZ27109.1| isoleucyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 932

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 108/321 (33%), Gaps = 48/321 (14%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDF--HRGDPSPIRDIIDNLA 281
           ++ P      ++AM++   D      +   +    F+ +D    H      +  I   + 
Sbjct: 449 EFFPAWGRARLEAMIRNRPDWCVSRQRNWGVPMTFFVHKDTHAPHPRSLDLLEQIAQKVE 508

Query: 282 RQGYVYEGILPPPKSKTTQKCD----MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           +QG      L   +    +  D     D   + F S    D     ++K+D   T+    
Sbjct: 509 QQGIEAWFALAGAELLGEEAKDYKKLTDTLDVWFDSGTTHD----TVVKADAHLTFPVD- 563

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                          +Y+ GSD   G+ +       A+ ++     +L    V    DG 
Sbjct: 564 ---------------LYLEGSDQHRGWFQSSLLTGCAIDDRAPYKALLTHGFVV---DGN 605

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ I  + V+D  G+D +R  +     S  L      +K   +         
Sbjct: 606 GHKMSKSKGNVIAPQKVMDTSGADILRLWVASTDYSGELSISEEILKRVIE--------- 656

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +Y R R+  R       D D      + I +  E D   L L    A + + +       
Sbjct: 657 SYRRIRNTLRFLLANLMDFDPQTDSID-IAECLEIDRYMLALT---AAFQKDLIQGYERY 712

Query: 517 EPYKLAFYLYDLAS-VFHGHW 536
           E +++   L++  S    G +
Sbjct: 713 EFHQVVHKLHNFCSEDLGGFY 733


>gi|219685546|ref|ZP_03540363.1| valine--tRNA ligase [Borrelia garinii Far04]
 gi|219672945|gb|EED29967.1| valine--tRNA ligase [Borrelia garinii Far04]
          Length = 252

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 65/223 (29%), Gaps = 40/223 (17%)

Query: 90  NLYL----SPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           N  L     P      + +  + + +    N + +   +       N TG +H+GH    
Sbjct: 2   NFRLLEKYDPKAFEDEIYNKWLKNNVFLPNNSLFEKFSMVA--PPPNVTGVLHMGHALNF 59

Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
           V+ D L        +     +  + AG        +VF R  + +  +  D         
Sbjct: 60  VLQDILVRYKRMKKHNTLWLFGTDHAG----IATQAVFERNLKNIGKSKDDFE----REE 111

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K +  +L DK+   ++N                         +K L   +D       
Sbjct: 112 LVKEI-FKLKDKHRGVIVNQ------------------------IKKLGASYDHSRERFT 146

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                   +  +  +L  +G +Y G         +     D +
Sbjct: 147 LDESLCKAVNKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|154499847|ref|ZP_02037885.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
 gi|150271445|gb|EDM98702.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
          Length = 896

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 61/197 (30%), Gaps = 36/197 (18%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +  +      +  +         I     N TG +H+GH   + + D L    
Sbjct: 11  PQEVEGRVYEMWEKNGCFEGHRDPDKKPFTIVMPPPNVTGQLHMGHAMDSTLQDILIRFK 70

Query: 155 AFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
              GY        + AG   QI                                  V +E
Sbjct: 71  RMEGYAALWVPGTDHAGIATQI---------------------------------KVEEE 97

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L         +   +K+L  V D+  +   +I++   K L    D   +      G  + 
Sbjct: 98  LRKNEGLTRYDLGRDKFLERVWDWKHKYGDRIVQQQ-KKLGASCDWSRARFTMDEGLSNA 156

Query: 273 IRDIIDNLARQGYVYEG 289
           +R +  +L ++G +Y+G
Sbjct: 157 VRHVFVSLYKKGLIYKG 173


>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|187629805|sp|A9KSM5|SYC_CLOPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 470

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 125/403 (31%), Gaps = 100/403 (24%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  VV DT+   + + GY+V       D   +I      +    ++
Sbjct: 27  CGPTVYNYIHIGNARPVVVFDTVRRYLEYKGYDVNFVSNFTDVDDKI------IKKANEE 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +                      E++++Y  E L   E                     
Sbjct: 81  GVS-------------------AHEISERYIKEYLKDTEA-------------------- 101

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE----------GILPPPKSK 297
            L  L +      +E      +   + D+I+ L  +G+ YE                K  
Sbjct: 102 -LNVLPVTTRPKATE------EIDGMIDMIEELIEKGHAYEKNGTVYFKTRSFKQYGKLS 154

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCK 344
                D++    +  +    D +D  L K              DG   +    +      
Sbjct: 155 KKNIDDLEAGARIAVADEKDDPMDFVLWKPKKVGEPAWSAPWCDGRPGWH---IECSVMS 211

Query: 345 YERGFDNM-IYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
            +   D + I+  G D     H   + + E       ++ A+  +    L    +     
Sbjct: 212 KKYLGDQIDIHAGGEDLIFPHHENEIAQTECCT---GKEFAKYWMHNGFLNVDNK----- 263

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+F T+R +  E     +RF +L       ++F    +  +S +N +  +Q A 
Sbjct: 264 KMSKSEGNFFTVREIFAEYAPAVLRFFLLSVNYRSPINFSRDII--ESSKNGLERIQTAV 321

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            +      + K    +L  +L   +      EFD     LI  
Sbjct: 322 EQLH-FLAKVKAEKGELSTEL-TESESTLLKEFD----ALIKK 358


>gi|323166621|gb|EFZ52380.1| valyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 543

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|158423823|ref|YP_001525115.1| glutamyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158330712|dbj|BAF88197.1| glutamyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 484

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 95/315 (30%), Gaps = 50/315 (15%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
            +            +   + +PTG +H+G  R A+     A   A  G  + R   I D 
Sbjct: 4   RFPPTSGLYEMSQIVTRFAPSPTGFLHIGGARTALFNWLYAK--AKGGKMLLR---IEDT 58

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             Q             + L     D       G  +    +  A+++   +         
Sbjct: 59  DRQ--RSTKEAIDAILEGLTWLGIDW-----DGDVIYQFAR--AERHRQAVEEMLSRGNA 109

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                Y+    +  +R+  +             D    +    R  +  L          
Sbjct: 110 YPC--YATPEELDEMRELARKEGRPPRYDGRWRDRPASERPTDRKPVIRLRA-------- 159

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P+   T   D  +  + F +  +    D  LL+SDG+ TY    LA     ++ G  
Sbjct: 160 ---PQEGVTVIEDQVQGTVTFPNKDLD---DLVLLRSDGTPTYM---LAVVVDDHDMGVT 210

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           N+I   G DH     R   +  A+     ++       + L       K+SKR G     
Sbjct: 211 NIIR--GDDHLTNAARQTQIYNALGWDVPRMAH-----IPLIHGPDGAKLSKRHG----- 258

Query: 411 RHVVDEVGSDSVRFM 425
                 +G D+ R M
Sbjct: 259 -----ALGVDAYRDM 268


>gi|257418802|ref|ZP_05595796.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257160630|gb|EEU90590.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 470

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEACKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|220912903|ref|YP_002488212.1| valyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859781|gb|ACL40123.1| tRNA synthetase valyl/leucyl anticodon-binding [Arthrobacter
           chlorophenolicus A6]
          Length = 872

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 68/218 (31%), Gaps = 40/218 (18%)

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R +A+      K A I+  +        D    KMSK  G+ +    V++E GSD+VR+ 
Sbjct: 568 RADALQKTAPWKHAAISGWIL-------DPDRKKMSKSKGNVVVPTDVLNEYGSDAVRYW 620

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
               K      ++  ++K                R       A     +L          
Sbjct: 621 AASAKLGADTAYEIAQMKIGR-------------RLAIKLLNASKFVLNLGATENSVVSA 667

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY----LYDLASVFHGHW---SH 538
                 +  +  L   LA+   V+  AT A E      Y       L   F   W     
Sbjct: 668 DLSVLTNPLDRAL---LAQLSDVVAQATKAFE-----NYDYARALQLTETF--FWQFTDD 717

Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             E  + R   A         L    A+A+ +++ L +
Sbjct: 718 YVELIKDRAYGAAGEAEQASVLA---ALATTLDTLLRL 752


>gi|167770372|ref|ZP_02442425.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
 gi|167667694|gb|EDS11824.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
          Length = 879

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 50/196 (25%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +          G  +            I     N TG +H+GH     + D L   
Sbjct: 17  DPKQVEDKTYRFWQDGGYFHAEPNPDKKPYTIVIPPPNITGRLHMGHALDETLQDILIRW 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                           +AL+   +D          ++ + +E 
Sbjct: 77  RRMQGY---------------------------EALWLPGTDHASIATEAKIVEAMRQEG 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I D LK L    D          G    +
Sbjct: 110 VTKEQLGREGFLERAWA------WKREYGGHILDQLKKLGSSCDWQRERFTLDEGCSRAV 163

Query: 274 RDIIDNLARQGYVYEG 289
           R++      QG +Y G
Sbjct: 164 REVFVRFFEQGLIYRG 179


>gi|150026526|ref|YP_001297352.1| glutamyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|187470991|sp|A6H2H7|SYE_FLAPJ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|149773067|emb|CAL44551.1| Glutamate--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 501

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 98/282 (34%), Gaps = 28/282 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A        +    +Y+       N           +A
Sbjct: 10  APSPTGALHIGGVRTALFNYLFAK-------KHNGVFYLRIEDTDQNRFVPGAEKYILEA 62

Query: 189 LY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     + D  + +    G Y +   K L  +Y+  L+N     W     D S    +  
Sbjct: 63  LKWLGISPDETIGKNEKFGPYRQSERKHLYKQYADLLIN---SGWAYYAFDTS--ESLDT 117

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +R   +A         +  +      +   + +      G  Y      P ++T    D+
Sbjct: 118 LRKITEAAGNTFIYNHTVRETLDNSLTNSPEKVAERIANGEDYVIRFKTPVNETLHLKDI 177

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R  + F + ++    D+ L KSDG  TY    LA     +     ++I   G +    +
Sbjct: 178 IRGDIKFETNLLD---DKVLFKSDGMPTYH---LANIVDDHLMETSHVIR--GEEWLPSM 229

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                +  A   +  +    L  +++   +G   K+SKR G+
Sbjct: 230 PLHVLLYRAFGWEAPEFAH-LPLILKPVGNG---KLSKRDGE 267


>gi|148270551|ref|YP_001245011.1| isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166229777|sp|A5IML2|SYI_THEP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|147736095|gb|ABQ47435.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 919

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 88/285 (30%), Gaps = 52/285 (18%)

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +  D  + E      +        +    +  + E  + P   K + +  +D   +   S
Sbjct: 472 VTLDPKVIEHFMKIVEKEGTNAWFEKEVEE-LIPEDFVCPKCGKRSFEKMLDTLDVWIDS 530

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAA 372
                           S+ Y          + +  F   +Y+ GSD   G+      +A 
Sbjct: 531 GA--------------SFEYITTK------REDHPFPLDMYLEGSDQHRGWFHSSIFLAV 570

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A         VL    +   +D    KMSK  G+ +    VV++ G++ +R  +      
Sbjct: 571 AKRGSAPYKEVLTHGFI---KDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYF 627

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +      V++Q++          Y + R+ FR         D +L   + +P E    
Sbjct: 628 NDIKISMRIVEQQTE---------VYRKIRNTFRFLLGNLEGFDPEL---DRVPYEKLLT 675

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                L         +I+ AT   +      Y       F   ++
Sbjct: 676 IDRWAL----GRLQEIIKRATEYYD-----SY------EFSKVYN 705


>gi|75674290|ref|YP_316711.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|123773340|sp|Q3SWI2|SYL_NITWN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74419160|gb|ABA03359.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 883

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +  +      I   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 8   ARDAEPRWQAEWDRQAIFATKNDDPREKYYVLEMF-PYPSGRIHIGHVRNYTLGDVIARY 66

Query: 154 MAFSGYEV 161
           M   GY V
Sbjct: 67  MRARGYNV 74


>gi|24216889|ref|NP_714370.1| bifunctional glutamate-tRNA ligase/glutamine-tRNA ligase
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45659164|ref|YP_003250.1| glutamyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|30316163|sp|Q8EYM3|SYE_LEPIN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|56749437|sp|Q72M46|SYE_LEPIC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|24198270|gb|AAN51388.1| bifunctional glutamate-tRNA ligase/glutamine-tRNA ligase
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45602410|gb|AAS71887.1| glutamyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 521

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 104/294 (35%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +P+G +HVG  R A+     A       ++     +  R             +  S+ 
Sbjct: 12  APSPSGFLHVGGARTALFNYLYAKSQGGKFILRIEDTDQNRS-----TEDSFKIILESLK 66

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           W     L  N  + PE G   G Y++     +  +Y+ +LL     K     + +  Q  
Sbjct: 67  W-----LGVNWDEGPEVGGEYGPYIQSQRLNIYKEYTEKLL-----KEKKAYRCFCTQEE 116

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++  +   +A+ + +      D  H        ++ + L +   +   +     SKT   
Sbjct: 117 LEAKKKQSEAMGVPYVY----DGLHANMSD--EEVQEKLKQG--IPYSVRFKTPSKTLII 168

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ + ++ F + ++GD +   ++KSDG  +Y   + A           ++I   G  H 
Sbjct: 169 NDIIQGKVKFETKLIGDFI---IVKSDGFPSY---NYAVVVDDALMKITHVIR--GVGHL 220

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
               R   +  A+     +                  K+SKRAG    +  R +
Sbjct: 221 SNTPRQILLYEALGYNIPEFAH-----ASEIVGMDGKKLSKRAGATSILAFRDL 269


>gi|298693861|gb|ADI97083.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 466

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|256822881|ref|YP_003146844.1| isoleucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796420|gb|ACV27076.1| isoleucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 938

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 10/140 (7%)

Query: 286 VYEGILPPPKSKTTQKC-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
           + E +    + K  Q   D+D  + +        D    +    G   Y   +    +  
Sbjct: 497 LMEKVSAYIEEKGIQAWYDLDASEFVDADKYEKIDDTLDVWFDSGVTHYCVLE---ARDY 553

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
             +  D  +Y+ GSD   G+ +     A  +       + L    V    DG   KMSK 
Sbjct: 554 LRQPAD--LYLEGSDQHRGWFQSSLLTATGMYGHAPYKHCLTHGFVV---DGKGEKMSKS 608

Query: 404 AGDFITLRHVVDEVGSDSVR 423
            G+ +    V++++G+D +R
Sbjct: 609 KGNVMAPNDVINKLGADVLR 628


>gi|239630434|ref|ZP_04673465.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067585|ref|YP_003789608.1| methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|239526717|gb|EEQ65718.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439992|gb|ADK19758.1| Methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 660

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                   +    +  L  
Sbjct: 16  PSGKLHIGNAYTTIAADVLARYKRLMGYDVF-----------------FLTGTDEHGLKI 58

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  ++L    +K++       V+A+  I+   +K 
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLW--KMLEITNDKFIRTTDKEHVEAVQTIVERLIKQ 116

Query: 252 ----LNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L      +  ED+ +  +   S +    D     G    G       + +    M 
Sbjct: 117 GDVYLGEYTGWYSVEDEEYFTESQLSEVYRDKDGNVTGGKAPSGHEVQLVHEPSYFFKMS 176

Query: 306 RK--QLLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIY 354
           +   +LL       D V     K++    +      DLA  +  +  G        +++Y
Sbjct: 177 KYTDRLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVY 236

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                +DH+ + K   A    + ++  + +++   ++ +         
Sbjct: 237 VWVDALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKK 296

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 297 IYAHGWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMR 338


>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710839|sp|B6EH43|SYC_ALISL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 462

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 106/313 (33%), Gaps = 53/313 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL----SVFWRYQQALYNN 192
           H+GH R  V  D ++  + F GY++T    I D   +I   A     S     ++ +   
Sbjct: 37  HIGHGRTFVSFDVISRYLRFLGYDLTFVRNITDIDDKIIKRAAENNESCEALTERLIAEM 96

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-------VKDYSVQAMMKII 245
            +D          ++    E   +    +    E  +  +        +        ++ 
Sbjct: 97  HADFDALKMKRPDVEPRATEYITEIVELVERLIERGFAYVASNGDVMFEVKKFDEYGRLS 156

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R DL+ L     + + E    R     +   +  +++ G   E     P         ++
Sbjct: 157 RQDLEQLQAGSRVTLEETSVKRSGMDFV---LWKMSKPG---EPTWESPWGPGRPGWHIE 210

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   S+++G+  D     SD  + +   ++A   C ++  +   +            
Sbjct: 211 CSAM--NSSILGNHFDIHGGGSDLMFPHHENEIAQSCCAHDAKY---VNTW--------- 256

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
                             +   +V + R+    KMSK  G+F T+R V+    S++VR+ 
Sbjct: 257 ------------------MHSGMVMIDRE----KMSKSLGNFFTIRDVLAHYDSETVRYF 294

Query: 426 MLWRKNSELLDFD 438
           ++       L++ 
Sbjct: 295 LMSGHYRSQLNYS 307


>gi|153854787|ref|ZP_01996021.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814]
 gi|149752694|gb|EDM62625.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814]
          Length = 646

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 117/391 (29%), Gaps = 57/391 (14%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
                  K  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I
Sbjct: 2   CEKCNKGKYYITTAIAYASGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKI 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
              A       ++ + N   ++         +  +     DK+        E +   I K
Sbjct: 62  ELKADEAGVTPKEFVDNASGEIK-------KIWDLMNTSYDKFIRTTDEDHEAQVKKIFK 114

Query: 235 DYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               Q    I +   + +     + F +E     G              + Y ++     
Sbjct: 115 KLYDQG--DIYKGAYEGMYCTPCESFWTESQLVDGKCPDCGRECKPAKEEAYFFKMSKYA 172

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----F 349
            +         +  Q + R   + ++   P             DL   +  ++ G    F
Sbjct: 173 DRLINYINEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDF 222

Query: 350 D--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           D  +++YV                 G+    + K   A    + +   + + +   +  +
Sbjct: 223 DPKHIVYVWLDALTNYITGIGYDCDGNSTELFNKNWPADLHLIGKDIIRFHTIYWPIFLM 282

Query: 392 YRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLD 436
             D                  KMSK  G+ +    +VD  G D+VR+ +L          
Sbjct: 283 ALDLPLPKQVFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGV 342

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
             +  + E+   +    +     R  S+  +
Sbjct: 343 ISWELMVERMNSDLANTLGNLVNRTISMTNK 373


>gi|197120011|ref|YP_002140438.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197089371|gb|ACH40642.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 925

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 21/171 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       +     +    NVL    V    DG   KMSK  G+ +    
Sbjct: 559 YLEGSDQHRGWFHSSLLASVGTRGRAPYKNVLTHGFVM---DGAGRKMSKSVGNVVAPED 615

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G D +R  +  +   + L      +   S+         +Y R R+  R      
Sbjct: 616 VIKKFGGDVLRLWVAAQDYRDDLRISQEILTRLSE---------SYRRIRNTCRYILGNI 666

Query: 473 PDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            D   D DL     +P+   +   +L+L+         +  +    E + L
Sbjct: 667 NDFNPDTDLVAYADMPELDRWAMHQLELLK------EKVLASYKDSEFHIL 711


>gi|145344290|ref|XP_001416669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576895|gb|ABO94962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1056

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 57/212 (26%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +             +   +     K  I     N TG +H+GH     + DT+   
Sbjct: 93  NPVAVEAAWYDWWERCGMFTPTMGTNKPKFVIVIPPPNVTGALHIGHALTNAIQDTIVRW 152

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE       + AG    T+                               V K+L
Sbjct: 153 RRMQGYEALWVPGTDHAGIATQTV-------------------------------VEKKL 181

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L  V ++      KI    L+ +    D               +
Sbjct: 182 QREEGVTRHDLGREKFLERVFEWKDVYGGKICNQ-LRRIGSSMDWTREAFTMDEKLSKAV 240

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++    +  +G +Y        S   +    D
Sbjct: 241 KEAFVRMFDEGLIYRDNRLVNWSCQLKTAISD 272


>gi|328675587|gb|AEB28262.1| Isoleucyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 935

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 24/184 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             +LD      ++I  +      +  +     E+   I  A    + + +       A +
Sbjct: 660 LSNLDGFNPATDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV-------AQL 711

Query: 532 FHGH 535
            H  
Sbjct: 712 IHHF 715


>gi|228470086|ref|ZP_04054995.1| glutamyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308224|gb|EEK17079.1| glutamyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 527

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 97/290 (33%), Gaps = 44/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       ++     +  R     E YI          
Sbjct: 7   APSPTGPLHIGGARTALFNYLFARHHGGTMVLRIEDTDSKRFVPGAEDYI---------- 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++ W   +      SD       G Y +   +E+  +Y  +L+     +       + 
Sbjct: 57  IEALQWLGIEIDEGIGSD---NQPYGPYRQSERREIYREYVQQLI-----ERGAAYYAFD 108

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               ++  R ++   +  +D         R   S + + +  L   G  Y         +
Sbjct: 109 TVEELEQARQEMPNFS--YDAAT--RSKMRNSLSLLSEEVTRLLESGAEYVVRFKVDPDR 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             +  D+ R +++  ST +    D+ L KS D   TY    LA     +     ++I   
Sbjct: 165 EVEVDDLIRGKVVISSTQLD---DKVLYKSADDLPTYH---LANIVDDHLMQITHVIR-- 216

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   + +        L+   +     K+SKR GD
Sbjct: 217 GEEWLPSAPLHVLLYEAFGWQDSMPQFAHLSLLLKPQG--SGKLSKRDGD 264


>gi|319411872|emb|CBQ73915.1| probable VAS1-valyl-tRNA synthetase [Sporisorium reilianum]
          Length = 1079

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 34/194 (17%)

Query: 98  LRKIL--SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
             +     +          +         I     N TG +H+GH     + DTL     
Sbjct: 123 WYQWWDKCNHFKPAEPTADDPYDPENTFIIPAPPPNVTGSLHIGHALTISIQDTLIRWYR 182

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
            +GY        N           SV                           V K LA 
Sbjct: 183 MNGYRTL----FNPGYDHAGIATQSV---------------------------VEKRLAK 211

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                  ++  EK+L  V ++      + I + ++ L   +D               + +
Sbjct: 212 IEGKTRYDYGREKFLEKVFEWKDDYQSR-IANQMRRLGASYDFSREAFTMDPVRSKAVTE 270

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 271 AFCKLHEDGIIYRA 284


>gi|307609513|emb|CBW99011.1| valyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 921

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + K L     S   +     G+G +  I     N TG +H+GH     + D L 
Sbjct: 4   TYSPEAIEKALYKKWES--HHYFQPRGEGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +   +   + AG         V  R  +A              G+  K + +
Sbjct: 62  RYHRMLGDKTLWQPGTDHAG----ISTQLVVERQLEA-------------QGISRKDLTR 104

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E           F ++ W    K+ S   + + +R     L    D          G  +
Sbjct: 105 E----------QFLDKVWQ--WKEESGNTITQQMR----RLGASVDWSRERFTMDEGLSA 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            ++ +   L  +G +Y G               D + L          +  P++ S+
Sbjct: 149 AVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSE 205


>gi|227555727|ref|ZP_03985774.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175132|gb|EEI56104.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315573949|gb|EFU86140.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581900|gb|EFU94091.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 478

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|206901012|ref|YP_002250639.1| lysyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740115|gb|ACI19173.1| lysyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 524

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/426 (13%), Positives = 137/426 (32%), Gaps = 66/426 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+GP+H+G+ R  + GD L   +   G EV    YI D    +  +   +   Y + +  
Sbjct: 32  PSGPIHLGNLREILTGDALYRALKEKGSEVEFI-YIADTFDPLRKVYPFLPESYAEHVGK 90

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLK 250
              ++P+   P    ++  +   + +   +     E K +   + Y      +II   L+
Sbjct: 91  PICEIPD---PEGCHENYAEHFLEPFLDAIKVLGIEPKVIKAHESYKNGLYTEIIDLTLE 147

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                             +   I +I++ +A +    E    P   K  +   ++   ++
Sbjct: 148 ------------------NNEKITEILNEIAGRNL--EKNFVPLLPKCEKCGRLNTTSII 187

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-----GSDHS---- 361
              T       +      G   Y   + A    + +      I+ +     G DH+    
Sbjct: 188 SFDTSKHQVEYQCKCGHTGIADYSKGE-AKLPWRLDWPGRWKIFGVTVEPFGKDHATTGG 246

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            Y             +       + E + L   G    MS   G  I++  +++ +    
Sbjct: 247 SYDTGKVITKEIFGYEPPYP--FVYEWIYLKGKGA---MSSSKGIAISINEILEILPPSW 301

Query: 422 VRFMMLWRKNSELLDFD-----FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           VR+++L  K  + +DFD         ++  +   ++Y         +   +  ++    +
Sbjct: 302 VRYLILRYKPDKHIDFDPVNGYILLAEDYERLERIYYRLEGTEEEWAELARVYELSQVKE 361

Query: 477 FDLFPRNVIPQESEFDTSELQLI---------------VHLAEYPRVIENA------TIA 515
               P   +P       +++ L                  L+++  +++           
Sbjct: 362 VPKEPGPQVPLRHLITLAQISLGNSELLKEMLVRSGYEKELSKFDEILKRVEYVNNWLQK 421

Query: 516 QEPYKL 521
             P ++
Sbjct: 422 FAPSQV 427


>gi|157374147|ref|YP_001472747.1| valyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157316521|gb|ABV35619.1| valyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 971

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQSWEEKGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      +   EK++  + D+  ++   I +  L+ L    D          G   
Sbjct: 93  KVAAEEGLNRHDLGREKFIDRIWDWKNESGGTITKQ-LRRLGASVDWDRERFTMDEGMSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLE 187


>gi|148927744|ref|ZP_01811180.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886907|gb|EDK72441.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 811

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP-MHVGHCRCAVVGDTLASLMAFSG 158
           K   +   S +   R+   K  +  +E+    P+G  MHVGH R   +GDTLA  M  SG
Sbjct: 12  KWQKAWAESRLYEARDDPAKPKRYILEYF-PYPSGAAMHVGHVRNYTIGDTLARHMRMSG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|147677147|ref|YP_001211362.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273244|dbj|BAF58993.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 886

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 51/200 (25%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +     +       +   +  +     I     N TG +H+GH     + D L 
Sbjct: 11  TYDPHSVENKWYAFWEKNGFFHTEVNPEQEPFCIVMPPPNVTGQLHMGHALDNTLQDILT 70

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +   ++   R ++ L                      
Sbjct: 71  RWKRMKGYNTL-------WLPGTDHAGIATQARVEEQL---------------------- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   E++L  V  +  +     I   L+ L    D          G   
Sbjct: 102 ---AKEGLSRHDLGREEFLKRVWAWK-EKYGNRITTQLRRLGASCDWQRERFTMDEGCSE 157

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            + ++   L ++G +Y    
Sbjct: 158 AVLEVFIKLFQRGLIYRDYY 177


>gi|302385713|ref|YP_003821535.1| glutamyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196341|gb|ADL03912.1| glutamyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 486

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 133/397 (33%), Gaps = 52/397 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A      G +        D    +      ++   ++ 
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIA---KHEGGDFLLRIEDTDQERFVEGAVEIIYRTLKET 65

Query: 189 LYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             N+D    +    G Y++       +  +Y+ +L+   E  +        + ++ K + 
Sbjct: 66  GLNHDEGPDKDGGVGPYVQSERQASGIYLEYAKKLVEKGE-AYYCFCSQERLDSLKKTVE 124

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                   +H + +S            R+ ++     G  Y      P   TT   D   
Sbjct: 125 GQEIMTYDKHCLHLS------------REEVEANLAAGMPYVIRQNNPTEGTTAFHDEIY 172

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +   S    +  D  L+KSDG  TY   + A     +  G  ++  V G+++     +
Sbjct: 173 GDI---SVDNSELDDMVLIKSDGFPTY---NFANVVDDHLMGITHV--VRGNEYLSSSPK 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVRF 424
              +  A   +     V +     L  +    K+SKR+G   +   ++ +  +    V +
Sbjct: 225 YNRLYHAFGWE-----VPVYVHCPLITNEEHKKLSKRSGHS-SYEDLILQGFISQAVVNY 278

Query: 425 MMLWRK----NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDL 479
           + L       N E+   D   +KE    N             +  R    +    +DFD 
Sbjct: 279 VALLGWSPVGNQEIFSLD-ELIKEFDYHNISKS---PAVFDMTKLRWMNGEYMKAMDFDQ 334

Query: 480 FPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
           F     P   +    +L L   +A         +P +
Sbjct: 335 FYELAEPYLKDVIKKDLDL-KKIAAMVKTRIEVFPDI 370


>gi|212530778|ref|XP_002145546.1| glutamyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210074944|gb|EEA29031.1| glutamyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 567

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 134/402 (33%), Gaps = 69/402 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R       GA+   L   + 
Sbjct: 59  APSPTGYLHLGSLRTALFNYLLAKRTGGQFLLRIEDTDQKRTIP----GAE-ERLYTDLQ 113

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W     L  ++  +  G Y G Y +     L  K++++L+      +        + A+ 
Sbjct: 114 WA---GLQWDEGPIVGGPY-GPYRQSERTALYHKHANDLVRSG-HAYRCFCSSERLDALA 168

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +    D   L + +D         R       D ++  A +G  +   L   +    +  
Sbjct: 169 RQRNQD--GLPLGYD---------RQCIDISADEVEERAAKGETHVVRLKADEYPKFKDF 217

Query: 303 DM------DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                      Q  F  TM     D  LLKSDG+ TY    LA     +     ++I   
Sbjct: 218 VFGTTGQNQDGQKRFLKTMNRVYDDPILLKSDGNPTYH---LANVVDDHHMKITHVIR-- 272

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF-ITLRHVVD 415
           G++         A+  A      +        V L  D    K+SKR  +  I+      
Sbjct: 273 GTEWLASTPMHVALYNAFDWTPPEFGH-----VPLLVDQNGQKLSKRNSNIDISFYRDSG 327

Query: 416 EVGSDSVRFMML--WRKNSELLDFDFCKV-----KEQSKENPV------FYVQYAYARCR 462
            + S  + +  L  W  N +   F    +      + +K N +      +++Q A+ +  
Sbjct: 328 ILPSTLLNYAALLGWSHNQKSEVFSLKDMEEIFTLKITKGNTIVSPEKMWFLQKAHTKRC 387

Query: 463 SIFR------------QAKDIFPDLDFDLFPRNVIPQESEFD 492
                           +A +   ++  +L  ++ +    + D
Sbjct: 388 VAENGPEFQKLVDDVTKAAEERGNIRDNLAIKDTVTSLLQHD 429


>gi|217978992|ref|YP_002363139.1| isoleucyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217504368|gb|ACK51777.1| isoleucyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 1071

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 101/306 (33%), Gaps = 47/306 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAAD- 337
           V   I     ++       +  +  F             DDV      S GS   F  D 
Sbjct: 617 VNARITEAFAAEGADAWFAEGAKARFLGNAHNPEAFEKIDDVLDVWFDS-GSTHAFTLDD 675

Query: 338 ------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELV 389
                 LA  + K + G D ++Y+ GSD   G+      +  +   + +A  +++L    
Sbjct: 676 PQNFPGLAGIRRKRDGGDDEIMYLEGSDQHRGWFHSS--LLESCGTRGRAPFDLVLTHGF 733

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            L   G   KMSK  G+    + ++ + G+D +R  +     S+ L      +K   +  
Sbjct: 734 VLDEKGQ--KMSKSQGNVTAPQTIIKDAGADILRLWVAASDYSDDLRIGPEILKTFIE-- 789

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y + R+  R         +    P   +  E   +  E  ++  L E    I
Sbjct: 790 -------TYRKLRNTIRWMLGTLAHYE----PERAVAVEQ-MEELERLMLHRLKELDEDI 837

Query: 510 ENATIAQEPYKLAFYLYDLASVFHG----HWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
            +A    +  ++      L+S  +      +   R++             ++ RL  + A
Sbjct: 838 RDAYQRFDLKRVVA---RLSSFLNSDLSAFYFDIRKDALYC-----EPPSSLKRLAALTA 889

Query: 566 VASIIN 571
           +  I  
Sbjct: 890 IEQIFR 895



 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 33/186 (17%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E  R       K  +        G +H+GH    ++ D +A      G +     Y+   
Sbjct: 63  ERMREAARGRPKFVLHDGPPYANGDIHIGHALNKILKDLIARSQQMLGADA---NYVPGW 119

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                 +   +  +Y+    + D ++P                  ++  E   F E    
Sbjct: 120 DCHGLPIEWKIEEQYRAKGRSKD-EVPVN----------------EFRRECRAFAE---- 158

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                      ++I R+  K L +  D             + I   I   A  G +Y G 
Sbjct: 159 ---------HWVEIQREQFKRLGVNGDWDHPYLTMTYPAEATIAREIMKFAENGLLYRGS 209

Query: 291 LPPPKS 296
            P   S
Sbjct: 210 KPVMWS 215


>gi|170748440|ref|YP_001754700.1| glutamyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|238688764|sp|B1LUJ9|SYE1_METRJ RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|170654962|gb|ACB24017.1| glutamyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 475

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 88/295 (29%), Gaps = 48/295 (16%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A              +          + L +  
Sbjct: 5   VVTRFAPSPTGYLHIGGARTALFNWLYAR-------------HTG------GKMLLRIED 45

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--- 240
             ++       D        + L   G  +     +E      E+ L   + Y   A   
Sbjct: 46  TDRERSTKGAIDAILDGLSWLGLDWDGDVVFQFARAERHRAVAEELLAAGRAYHCYATAE 105

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +R+  +A            D    +       +  L            P + +T  
Sbjct: 106 ELAQMRETARAEGRAPRYDGRWRDRDPSEAPAGVKPVIRLRA----------PIEGETVV 155

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  +          D  D  LL+SDG+ TY    LA     ++ G   +I   G DH
Sbjct: 156 EDAVQGRVTW----ANKDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQIIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
                R   + +A+     ++       + L       K+SKR G       R +
Sbjct: 207 LTNAARQSQIFSALGWDVPRMAH-----IPLIHGADGAKLSKRHGALGVEAYRDL 256


>gi|311745555|ref|ZP_07719340.1| glutamate--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578114|gb|EAZ82334.1| glutamate--tRNA ligase [Algoriphagus sp. PR1]
          Length = 512

 Score = 48.0 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 98/281 (34%), Gaps = 23/281 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-GAQINTLALSVFWRYQQ 187
           + +PTGP+H+G  R A+     A      G +      I D    +    A         
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFA---KKMGGKFLLR--IEDTDQTRFVPGAEEYIKESLD 64

Query: 188 ALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L     + P      G Y +   K    +Y+ +L+      +      +   A ++ +R
Sbjct: 65  WLGITPDESPWNPGSVGPYRQSERKPDYMQYALDLIEAGHAYY-----AFDTSAELEAMR 119

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + L A  +    + S       +   +  D +      G  Y   +  P+ +  +  DM 
Sbjct: 120 ERLTAARVVQPQYNSITRMQMKNSLTLSEDEVKERLASGDPYVIRVKIPRKEEVRLNDMI 179

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R  ++  ++ +    D+ L+KSDG  TY    LA     +  G  ++I   G +      
Sbjct: 180 RGWVMVHTSTLD---DKVLMKSDGMPTYH---LANIVDDHLMGITHVIR--GEEWLPSAP 231

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               +      +          L+ L  DG   K+SKR GD
Sbjct: 232 LHVLLYKFFGWEDTMPQFAHLPLL-LKPDGNG-KLSKRDGD 270


>gi|282883323|ref|ZP_06291917.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281296827|gb|EFA89329.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 879

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 49/196 (25%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P    + +    +    +   +       +I     N TG +H+GH     + D L   
Sbjct: 9   NPKDFEENIYDYWMKNDYFVAEVDKDKKPYSIVMPPPNVTGNLHMGHALNGTIQDILIRA 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          +  +  E 
Sbjct: 69  KRMQGYS---------------------------ALWLPGTDHASISTEAKVVAKIRSEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K       F +E W               I+   + L    D               +
Sbjct: 102 KEKEDLGREKFLDEAWA------WTHEYGGNIKKQFRKLGASCDWTRERFTLDETLSKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
             +   L  +G +Y G
Sbjct: 156 GQVFVELYNKGLIYRG 171


>gi|300814422|ref|ZP_07094692.1| putative valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511465|gb|EFK38695.1| putative valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 425

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 55/235 (23%), Gaps = 41/235 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P    + +    +    +   +       +I     N TG +H+GH     + D L   
Sbjct: 9   NPKDFEENIYDYWMKNDYFVAEVDKDKKPYSIVMPPPNVTGNLHMGHALNGTIQDILIRA 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            AL+   +D          +  +  E 
Sbjct: 69  KRMQGYS---------------------------ALWLPGTDHASISTEAKVVAKIRSEG 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K       F +E W               I+   + L    D               +
Sbjct: 102 KEKEDLGREKFLDEAWA------WTHEYGGNIKKQFRKLGASCDWTRERFTLDETLSRAV 155

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
             +   L  +G +Y G              S           ++ + +    D  
Sbjct: 156 GQVFVELYNKGLIYRGSRIINWCPSCKTSISDAEVDHIEHDGEIWYFTYPFEDGK 210


>gi|148360627|ref|YP_001251834.1| valyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|148282400|gb|ABQ56488.1| valyl tRNA synthase [Legionella pneumophila str. Corby]
          Length = 921

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + K L     S   +     G+G +  I     N TG +H+GH     + D L 
Sbjct: 4   TYSPEAIEKALYKKWES--HHYFQPRGEGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +   +   + AG         V  R  +A              G+  K    
Sbjct: 62  RYHRMLGDKTLWQPGTDHAG----ISTQLVVERQLEA-------------QGISRKD--- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E++L  V  +  ++    I   ++ L    D          G  +
Sbjct: 102 ------------LTREQFLDKVWQWKEESG-NTITQQMRRLGASVDWSRERFTMDEGLSA 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            ++ +   L  +G +Y G               D + L          +  P++ S+
Sbjct: 149 AVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSE 205


>gi|145297754|ref|YP_001140595.1| isoleucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166200195|sp|A4SIX5|SYI_AERS4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|142850526|gb|ABO88847.1| isoleucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 953

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 32/261 (12%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFISEDDFHRG 268
           E+       +    +  W+P      +QAM++   D     +             +  + 
Sbjct: 442 EIERIEKDGITQHGQSGWVPAWGKNRIQAMVENRPDWCISRQRTWGVPISLFVHKETQQL 501

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKS 327
            P  +R           ++E      +S      D+D+ +LL     + D V   L +  
Sbjct: 502 HPESVR----------LMHEVAKRVEQSGIQAWWDLDKAELLGSDADMYDKVPDTLDVWF 551

Query: 328 DGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLL 385
           D   T+ +   A    + E  G    +Y+ GSD   G+      +  A+ +K     VL 
Sbjct: 552 DSGSTHSSVVDA----RPEFNGHSADLYLEGSDQHRGWFMSSLMIGVAMKDKAPYNQVLT 607

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                   DG   KMSK  G+ ++ + V++++G+D +R  +     +  +     ++ ++
Sbjct: 608 HGF---TVDGQGRKMSKSIGNVVSPQDVMNKLGADILRLWVASTDYTGEMTVS-DEILKR 663

Query: 446 SKENPVFYVQYAYARCRSIFR 466
           S +        AY R R+  R
Sbjct: 664 SAD--------AYRRIRNTAR 676


>gi|82750237|ref|YP_415978.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|109894947|sp|Q2YSD1|SYC_STAAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82655768|emb|CAI80168.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L     ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQTVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A  +     +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFSNYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|258592110|emb|CBE68415.1| leucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 864

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       SG         +     +E     P+G +H+GH R   +GD LA  +   G
Sbjct: 12  AKWQRVWEESGAFAVMEEPERRKFYLLEMY-PYPSGRIHMGHVRNYAIGDVLARFLRMRG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|170289257|ref|YP_001739495.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176760|gb|ACB09812.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 920

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 75/227 (33%), Gaps = 37/227 (16%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAV 370
           RS     D     + S  S+ Y          + +  F   +Y+ GSD   G+      +
Sbjct: 516 RSFEKMLDTLDVWIDSGASFEYITTK------REDHPFPLDMYLEGSDQHRGWFHSSIFL 569

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A A         VL    +   +D    KMSK  G+ +    VV++ G++ +R  +    
Sbjct: 570 AVAKRGSAPYKEVLTHGFI---KDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSD 626

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               +      V++Q++          Y + R+ FR         D +L   + +P E  
Sbjct: 627 YFNDIKISMRIVEQQTE---------VYRKIRNTFRFLLGNLEGFDPEL---DRVPYEKL 674

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                  L         +I+ AT   +      Y       F   ++
Sbjct: 675 LTIDRWAL----GRLQEIIKRATEYYD-----SY------EFSKVYN 706


>gi|331006482|ref|ZP_08329783.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419707|gb|EGG94072.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 943

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 85/237 (35%), Gaps = 23/237 (9%)

Query: 292 PPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYF---KCKY 345
           P    K  QK + +     F      ++GDD D+    +D    +F + + +    + + 
Sbjct: 491 PALIEKVAQKIEQEGIDAWFDIDAKELLGDDADQYEKVTDTLDVWFDSGVTHHSVLRDRA 550

Query: 346 ERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              F   +Y+ GSD   G+ +     +  ++ +     VL         D    KMSK  
Sbjct: 551 GLHFPADLYLEGSDQHRGWFQSSLKTSMTINGEPPYKQVLTHGF---TVDANGKKMSKSV 607

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I  + V++++G+D +R  +         DF                ++      R I
Sbjct: 608 GNVIPPQKVMNDLGADVLRLWV------SATDFSAEMSVSDE------ILKRTADSYRRI 655

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
              A+ +  +L+      +++P            +   +E  + I ++    + + +
Sbjct: 656 RNTARFLLANLEGFNPETDLVPVNDLIALDCWA-VSRASELQKEIVDSYDTYQLHNI 711


>gi|320190608|gb|EFW65258.1| Valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
          Length = 951

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQKSFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|296875694|ref|ZP_06899759.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433264|gb|EFH19046.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 486

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 120/383 (31%), Gaps = 77/383 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLVVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   V  A+  +  +       +  +       K+SKR  + +       + G
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIEDYRKKG 274

Query: 419 --------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                      + ++     R +     FD  K+   S E    
Sbjct: 275 YLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQKKMDWMSNE---- 330

Query: 453 YVQYAYARCRSIFRQAKDIFPDL 475
           Y++ A     +IF  AK    + 
Sbjct: 331 YIKNADL--ATIFEMAKPFLEEA 351


>gi|227498594|ref|ZP_03928738.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904050|gb|EEH89968.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 934

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A + K     VL         DG   KMSK  G+ +  +
Sbjct: 566 LYLEGSDQHRGWFQSSLLTSVATTGKAPYRAVLTHGY---TLDGEGRKMSKSLGNTVAPQ 622

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D VR  +        +      +K  S+          Y + R+  R     
Sbjct: 623 DIIKDYGADIVRLWVSSTDYKGDVRVSKEIIKHVSE---------VYRKIRNTIRYILGN 673

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D +      +P     +  +  L+  L E  + +E A    + + +
Sbjct: 674 TSDFDAETMK---VPFAEMEELDQWALMR-LQELKKDVEKAYENYDFHVV 719


>gi|139436994|ref|ZP_01771154.1| Hypothetical protein COLAER_00128 [Collinsella aerofaciens ATCC
           25986]
 gi|133776641|gb|EBA40461.1| Hypothetical protein COLAER_00128 [Collinsella aerofaciens ATCC
           25986]
          Length = 858

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K + +   S +        K  K  +E     P+G +H+GH R   +GD +A      GY
Sbjct: 22  KWMKAWEDSNLFAVDTDDSKPKKYVLEMF-PYPSGDLHMGHARNYTIGDAMARQARMRGY 80

Query: 160 EV 161
           +V
Sbjct: 81  DV 82


>gi|111220457|ref|YP_711251.1| methionyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111147989|emb|CAJ59655.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (partial)
           [Frankia alni ACN14a]
          Length = 503

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 79/479 (16%), Positives = 133/479 (27%), Gaps = 107/479 (22%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G  HVGH    V  D  A  +   G EV  +   +D                  AL
Sbjct: 11  PYVNGKPHVGHALELVETDAFARHLRARGDEVRCQTGTDD-----------------NAL 53

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--------------EKWLPIVKD 235
            N      EG  P  Y++ V            L+F +              EK      +
Sbjct: 54  KNVQGAEAEGITPAEYVERVAARFISLREPLSLSFDDFIKTSTDPRHRPGVEKLWAACAE 113

Query: 236 YSVQAMMKIIRDDLKALN-IQHDIFISEDDFHRG---DPSPIRDIIDN------------ 279
                     R     L  +  ++F S D+   G   +   + D+++             
Sbjct: 114 RG-----DFYRKSYAGLYCVGCELFYSPDELVDGRCPEHGTVPDLVEESNWFFRLSRYQD 168

Query: 280 -LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV------------GDDVDRPLLK 326
            L          + P   K      ++     F ++              GD      + 
Sbjct: 169 QLHELISTDRLRIEPATRKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPDQVIYVW 228

Query: 327 SDGSYTYFA-----ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
            D    Y        D A F+  +    D  ++V+G      + R  AV        A +
Sbjct: 229 FDALGNYITAPGYGTDDATFQHWWNDS-DARVHVIGKG----IIRFHAVYWPAMLLSAGV 283

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFC 440
            +     V  Y      K+SK AG+      +V    +D++R+ ML     S   D+   
Sbjct: 284 RLPDTIFVHEYLTADGQKISKSAGNAEDPADIVAASNTDALRWWMLRDVARSGDTDYTTE 343

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           ++  ++ E+    +     R  S+ ++ +D             VIP  +  +     L  
Sbjct: 344 RLLARANEDLANNIGNLVNRTVSMVKRYRD------------GVIPPVAADNPGAAAL-- 389

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
                      A   Q P  +     D  + F                   NR +   R
Sbjct: 390 ----------RAVREQAPATI-----D--AAFTAFDFRRAAEAVTAIGNEGNRYVEAAR 431


>gi|117925437|ref|YP_866054.1| isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609193|gb|ABK44648.1| Isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 954

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       +    ++     VL    V    DG   KMSK  G+ I   
Sbjct: 576 LYLEGSDQHRGWFHSSLLASVGTRDRAPYKAVLTHGFVV---DGKGHKMSKSRGNVIAPE 632

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ + G+D +R  +     +  +      +K  S          AY R R+  R     
Sbjct: 633 KVIKQYGADILRMWVSAEDYAGDIRISDEILKGLSD---------AYRRIRNTIRYLISN 683

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
               D      + +P     +     L   +A   R +E A      +++
Sbjct: 684 LSGFD---AAEHTVPYGQLLELDRWALDR-VARLIRDVEKAYTDYTFHRV 729


>gi|186680640|ref|YP_001863836.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463092|gb|ACC78893.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 534

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 67/471 (14%), Positives = 136/471 (28%), Gaps = 78/471 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G     +  D +A      G++V      ++ G +I   A S+  +  Q   +     
Sbjct: 25  HIGSAYTTIAADVVARFHRLLGHQVLLITGTDEHGQKIQRSAESL-GKAPQEFCDEVVPS 83

Query: 197 PEGYYPGVYLKH--VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
               +  + +K+    +  A ++ + +  F E  W     D              +    
Sbjct: 84  FISLWQLLDIKYDRFSRTTAPRHEAIVKEFFERVWESG--DIYQGQQQGWYCVSCEEFKE 141

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE----------------GILPPPKSKT 298
           + D+           P      ++    Q Y +                   + P   + 
Sbjct: 142 ERDLLEGHRC-----PIHTNKEVEWRDEQNYFFRLSKYQNKLTEFYQSKPNFIQPESRRN 196

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--LAYFKCKYERGFDN----- 351
                +++    F  + V  D   P+        Y   D  L Y     E   +      
Sbjct: 197 EVLSFVNQGLQDFSISRVNLDWGFPVPVDPKHTLYVWFDALLGYVTALLEPDAEPTLANA 256

Query: 352 -------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                   ++++G D    + R  AV   A  +S        +      L +DG   KM 
Sbjct: 257 LETWWPINLHLIGKD----ILRFHAVYWPAMLLSAGLPLPERVFGHGF-LTKDGQ--KMG 309

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF----DFCKVKEQSKENPVFYVQYA 457
           K  G+ +    +V   GSD+VR+  L       ++F    DF +V+  +  N        
Sbjct: 310 KSLGNTLDPVSLVQRYGSDAVRYYFLKE-----IEFGKDGDFNEVRFINVLNADLANDLG 364

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-AEYPRVIENATIAQ 516
               R+     K    D +        I  E+         +  +       ++ A    
Sbjct: 365 NLLNRT-LSMVKKYCVDNNVPSIGNEGISDENP--------LKTIGLRLGEQVKEAYKEL 415

Query: 517 EPYKLAFYLYDLASVFHGH---------WSHGRENPRLRFVQANNRKLTMM 558
              +    +  LA   +           +  G++    + + A    + + 
Sbjct: 416 AFSQACGAILSLAQASNKFIDEQAPWSLYKQGQQESVEKVLYAVLESVRLA 466


>gi|113476946|ref|YP_723007.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110167994|gb|ABG52534.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 911

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P                +  +    G    I     N TG +H GH     + D L   
Sbjct: 13  DPFVTEAKWQRYWEENNTFKADPKQAGDPYCIVIPPPNVTGSLHAGHAFNNSLIDAL--- 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +   +N   LP   +  + ++ + +  
Sbjct: 70  -----------------------------IRYHRMRGDNTLYLPGTDHASIAVQTILERK 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   EK+L +  ++  ++    I + L+ L +  D          G    +
Sbjct: 101 LKADGQTRYDVGREKFLKLAWEWKAESG-GTIVNQLRRLGVSTDWTRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEG 289
            +    L  QG +Y G
Sbjct: 160 IEAFMRLYEQGLIYRG 175



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 120/385 (31%), Gaps = 59/385 (15%)

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L     EL D+++     F  E+W  + +D+ V+     I   L     Q   +    + 
Sbjct: 371 LAEKTLELLDRHNQP--KFVPERWTKVYRDWLVKIQDWCISRQLW-WGHQIPAWYVISET 427

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +         ++     +             K  Q  D+      F S++          
Sbjct: 428 NGEIADNTPFVVARFEAEALEVAKKKFGDHVKIQQDPDVLD--TWFSSSL--------WP 477

Query: 326 KSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            S   +     DL   Y       GFD +I+         V R+  +   ++ K      
Sbjct: 478 FSTLGWPENTPDLEKYYPTSTLSTGFD-IIFFW-------VARMTMMGVHLTGKMP-FET 528

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +    + L  +G   K SK AG+ I    ++++ G+D++R+ ++        D    ++ 
Sbjct: 529 VYIHGLMLDENGK--KQSKSAGNGINPLLLIEKYGTDALRYTLMRETAGAGQD---VRMD 583

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              + +    V+ +      I+  A+ +   L+         P+  + +  +  ++ H  
Sbjct: 584 YNRETDESASVEASRNFTNKIWNAARFVMMKLEGKTPEELGKPEVDKLELVDRWILSH-- 641

Query: 504 EYPRVIENATIAQEPYKLAFYL--YDLASVFHGHWS-------HGRENPRLRFVQANNRK 554
            + + ++             YL  Y L     G +                  +Q  +  
Sbjct: 642 -FYQTVQQT---------CDYLDNYGLGEAAKGLYEFIWGYFCDWYLELVKSRLQGEDE- 690

Query: 555 LTMMRLQLVHAVASIINSGLNIIGV 579
               RL         +   L+  G+
Sbjct: 691 --NSRLV----AQQTLAYVLD--GI 707


>gi|319405650|emb|CBI79273.1| Methionyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 513

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 127/425 (29%), Gaps = 64/425 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    H+GH   A+V D LA      G  V      ++ G ++   A  +    QQ    
Sbjct: 14  PNSAPHIGHAYNAIVSDALARFQKADGKNVFFLSGTDEHGLKMQQTAQMLNMTPQQLADR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEK----------WLPIVKDY 236
           N +   +           +++    E   K   EL    E K          W  + ++ 
Sbjct: 74  NSAVFQKMLAMLNCSNNDFIRTTE-ERHHKACQELWKKMEAKGDIYLGCYAGWYSVRQEA 132

Query: 237 SVQAMMKIIRDD----LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +     I  +     K L    +    E  F R   S     +     +   + G   
Sbjct: 133 YYEEKDTKIDQEGIRREKELGSPVEWNEEESYFFRL--SRYEKALLEHYEKYPDFIGP-N 189

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
             +++         K L    T         G+      +  D    Y  A   + +   
Sbjct: 190 ERRNEIINFVKSGLKDLSISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTAVDFFDENSK 249

Query: 346 ERGF---DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           +R F   D  I+++G D    H+ Y     A   +   +  +       L+         
Sbjct: 250 KRRFWPAD--IHIIGKDIIRFHAVY---WPAFLMSAGIELPKRIFAHGFLLN-----RGA 299

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +    +V+  G D VR+  L           F +    + +N V       
Sbjct: 300 KMSKSVGNVVDPFEMVERYGLDQVRYFFLREVP-------FGQDGSYNHDNFV------- 345

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENATIA 515
            R  +               +  +N    IP  + F   + QL+    +   ++    + 
Sbjct: 346 NRINADLANDLGNLAQRSLSMIEKNCNMKIPTPAAFLIQDEQLLKQSLQVLEIVRRTMLD 405

Query: 516 QEPYK 520
           Q P+ 
Sbjct: 406 QAPHL 410


>gi|291393645|ref|XP_002713397.1| PREDICTED: DALR anticodon binding domain containing 3 [Oryctolagus
           cuniculus]
          Length = 529

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 27/188 (14%)

Query: 402 KRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN-PVFYVQYA 457
           KR GD         +   +   +++F ML       L          +K      +V Y 
Sbjct: 333 KRGGDPAQDPAWTEIAGVLSVATIKFEMLSTAPRSQLLLAPADSSISTKGTKSGIFVMYN 392

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIV-HLAEYPRVIENATIA 515
            AR  ++F   K       +  FP       S   D  E  L+   +  +P ++      
Sbjct: 393 CARLATLFESYKRSEEQGLYPPFPSVASLDFSLLQDEGEWLLLFNSVLPFPELLSQLAA- 451

Query: 516 QEP-----YK------LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---TMMRLQ 561
             P     +       +  +L  L+  F  +++      R+  +      L      RLQ
Sbjct: 452 LAPTTPGLHLPARTETVCKFLVQLSMDFSSYYN------RVHVLGEPRPHLFGQMFARLQ 505

Query: 562 LVHAVASI 569
           L+ A+  +
Sbjct: 506 LLRAIREV 513


>gi|282901620|ref|ZP_06309538.1| Arginyl tRNA synthetase anticodon binding [Cylindrospermopsis
           raciborskii CS-505]
 gi|281193496|gb|EFA68475.1| Arginyl tRNA synthetase anticodon binding [Cylindrospermopsis
           raciborskii CS-505]
          Length = 259

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 27/147 (18%)

Query: 451 VFYVQYAYARCRSI--FRQAKDIFPDLDFDLFPRNVIPQESE------FDTSELQLIVHL 502
           +F VQ+AYARC S+    + +         L   + IP          +   E+ LI  L
Sbjct: 120 IFAVQHAYARCVSLINLAKREGWIKTEGQPLLSVSFIPWLDHCQKLRFYQPDEIHLIHLL 179

Query: 503 AEYPRVIENATIAQE-PYK---LAFYL---YDLASVFHGHWSHGRENPRLRFVQANNRKL 555
                           P+    +  +L     L+S F   WS+    P   +V+ ++ +L
Sbjct: 180 VR-------TVDDLAFPHIQRSI-NWLAVAEKLSSAFEKFWSNC---PIWGYVKIHDPEL 228

Query: 556 TMMRLQLVHAVASIINSGLNI-IGVES 581
              R+ ++     +I   L + + V +
Sbjct: 229 AKARIGMLILTQVVIKYILEVKLNVTA 255


>gi|259047760|ref|ZP_05738161.1| glutamate--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035951|gb|EEW37206.1| glutamate--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 499

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 102/295 (34%), Gaps = 34/295 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A                   G +   + +    R +  
Sbjct: 18  APSPTGHLHIGNARTALFNYLFAR----------------HYGGEF-IIRIEDTDRKRNL 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIR 246
            +  +S L    + G+     G +   KY     +  E  + P+++    +  A    + 
Sbjct: 61  EHGEESQLENLTWLGMD-WDEGPDKPGKYGPYRQSEREHIYNPLIEQLIAEDKAYKCYMT 119

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +      E   + G  + + ++  D    +G         PK+ T    D+ 
Sbjct: 120 EEELEAEREAQRARGEMPHYSGQHAHLTQEQRDAFEAEGRTPVVRFRVPKTGTYAFDDIV 179

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           + ++ F ST VG D    +LK DG  TY       F    +  F  + +V+ G DH    
Sbjct: 180 KGEISFESTSVGGDF--VILKRDGMPTYN------FAVAVDDHFMEITHVLRGDDHIANT 231

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   +  A   +  +       +  +       K+SKR    +       ++G 
Sbjct: 232 PKQLMIYEAFGWEPPRFGH----MTLIINTETGKKLSKRDESILQFIEQYKDLGY 282


>gi|251809798|ref|ZP_04824271.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875420|ref|ZP_06284292.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251806666|gb|EES59323.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295777|gb|EFA88299.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329733027|gb|EGG69366.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 656

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 116/375 (30%), Gaps = 128/375 (34%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V                      RY   L  
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDV----------------------RY---LTG 49

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D         G  +    +E A K     L + +E             M+  I++    
Sbjct: 50  TDE-------HGQKI----QEKAQKAGKTELEYLDE-------------MISGIKNLWSK 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP----------PKSKTTQK 301
           L I +D FI      +     +  + + L +QG +Y G               +S+    
Sbjct: 86  LEISNDDFI--RTTEKRHKQVVEKVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDP 143

Query: 302 CDMDRKQLLFRSTMVGDDV----------------DRPLLKSDGSYTYF----------- 334
              + K +  +S   G +V                DR L   D +  +            
Sbjct: 144 VYENGKIVGGKSPDSGHEVELVKEESYFFNINKYTDRLLEFYDENPDFIQPPSRKNEMIN 203

Query: 335 ------AADLAYFKCKYERG------FDNMIYVM--------------GSDHSGYVKRLE 368
                   DLA  +  ++ G        +++YV                 D + + K   
Sbjct: 204 NFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALVNYISSLGYLSDDETLFNKYWP 263

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVV 414
           A    ++++  + + ++  ++ +  D                  KMSK  G+ +    ++
Sbjct: 264 ADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLI 323

Query: 415 DEVGSDSVRFMMLWR 429
           D  G D+ R+ ++  
Sbjct: 324 DRYGLDATRYYLMRE 338


>gi|239904844|ref|YP_002951582.1| valyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794707|dbj|BAH73696.1| valyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 888

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 59/195 (30%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +     +       +  +  G G   +I     N TG +H+GH     + D L    
Sbjct: 12  PADVEAKWIAYWQDEKTFTPDPDGPGEPYSIVIPPPNVTGALHMGHALNITIQDILCR-- 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                     Y+          L   V W            +P   + G+  ++V +   
Sbjct: 70  ----------YH--------RQLGRKVLW------------VPGTDHAGIATQNVVERSL 99

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               +       E ++  V  +  +   KI+   +  L    D          G    +R
Sbjct: 100 AAAGTSREELGREAFIERVWKWREEYGGKILNQ-ISRLGASVDWSRERFTMDEGLSKAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++   L   G +Y+G
Sbjct: 159 EVFVRLYEDGLIYQG 173


>gi|256828301|ref|YP_003157029.1| isoleucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577477|gb|ACU88613.1| isoleucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 936

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 73/193 (37%), Gaps = 32/193 (16%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+ G+D   G+      + A++  +       VL    V    DG   KMSK  G+ + 
Sbjct: 562 LYLEGTDQHRGWFHSS--LLASMGTRGVPPYRTVLTHGFV---LDGQGRKMSKSIGNVVA 616

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
            + ++++ G++ +R  +      E L      ++             AY + R+  R   
Sbjct: 617 PQEIIEKHGAEVLRLWVASENYQEDLRISDEILRRLVD---------AYRKIRNTCR--F 665

Query: 470 DIFPDLDFDLFPRNVIPQESE-FDTSELQLI--VHLAEYPRVIENATIAQEPYKLAFY-- 524
            +    DFD     V   +    D   L ++   H     + I+ A    E +K+  Y  
Sbjct: 666 ILGNLSDFDPAADLVATADMLPLDRYALNMVRSKH-----QTIQAAYENFEFHKV--YHT 718

Query: 525 LYDLA-SVFHGHW 536
           L++L  +    ++
Sbjct: 719 LHNLCTTDLSSYY 731


>gi|169831629|ref|YP_001717611.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638473|gb|ACA59979.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 881

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +           +           +I     N TG +H+GH     + D L   
Sbjct: 11  DPHQVEERRYRYWEEHGFFRPLPGTGREPYSIVMPPPNVTGELHMGHALNNTLQDVLTRW 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E              +   ++   R +  L                     +E 
Sbjct: 71  RRMQGFETL-------WLPGTDHAGIATQARVEGQL--------------------AQEG 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             KY     +   EK+L  V ++      + I   L+ L    D          G  + +
Sbjct: 104 LTKY-----DLGREKFLERVWEWKANYGHR-ITTQLRRLGASCDWSRERFTMDEGCSAAV 157

Query: 274 RDIIDNLARQGYVYEGIL 291
           R++   L  +G +Y    
Sbjct: 158 REVFLRLYEEGLIYRDYY 175



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 41/224 (18%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+        +++    V +  LV    D +  KMSK  G+ +    V+++ G+DS+
Sbjct: 493 WVARMIFSGLKFMDREPFAEVFIHGLV---LDALGRKMSKSLGNGVDPIEVIEKYGADSL 549

Query: 423 RFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           RFM++        L F F K++        F  +   A    +             D  P
Sbjct: 550 RFMLVTGNTPGNDLRFHFEKLESSRN----FANKLWNASRFVLLNLG---------DYRP 596

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL---ASVFHGH-WS 537
               P   E     +     L+ +   +   T   E        Y+L   A   +   W 
Sbjct: 597 DKAAPGTLELADRWI-----LSRFGAALARTTAGLE-------AYELGEAARALYEFIWD 644

Query: 538 H----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
                  E  + R  Q  + +  + +  LV     ++ S L ++
Sbjct: 645 EFCDWYIELVKPRLYQGTDEERAVAQYVLV----RVLRSTLELL 684


>gi|57237679|ref|YP_178927.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|57166483|gb|AAW35262.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058288|gb|ADT72617.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 628

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 100/322 (31%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQN 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G+     ++T+    +   Q       + DD     +  D  + Y ++ L +        
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIVYVWLDALFIYVSS-LDFQSKGENTK 246

Query: 349 F-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           F    ++++G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 247 FWPAHVHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + VVD  GS++ R+ +L  
Sbjct: 303 VKPKEVVDAYGSEAFRYFLLRE 324


>gi|70728445|ref|YP_258194.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|90101545|sp|Q4KHT9|SYV_PSEF5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68342744|gb|AAY90350.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 948

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 53/213 (24%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L                                 +   
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV--------------------------------ERQI 92

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +       +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 93  EAQGQNRHDLGREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|255974563|ref|ZP_05425149.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|257087877|ref|ZP_05582238.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|255967435|gb|EET98057.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256995907|gb|EEU83209.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 470

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|330831173|ref|YP_004394125.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328806309|gb|AEB51508.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 953

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 96/260 (36%), Gaps = 30/260 (11%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFISEDDFHRG 268
           E+       +    +  W+P      +QAM++   D     +             +    
Sbjct: 442 EIERIEKDGIAQQGQSGWVPAWGKNRIQAMVENRPDWCISRQRTWGVPISLFVHKETQEL 501

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKS 327
            P  +R           ++E      +S      D+D+ +LL     + D V   L +  
Sbjct: 502 HPESVR----------LMHEVAKRVEQSGIQAWWDLDKAELLGADADMYDKVPDTLDVWF 551

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLC 386
           D   T+ +   A  + ++     +M Y+ GSD   G+      +  A+ +K     VL  
Sbjct: 552 DSGSTHASVVDA--RPEFNGKPADM-YLEGSDQHRGWFMSSLMIGVAMKDKAPYNQVLTH 608

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
                  DG   KMSK  G+ ++ + V++++G+D +R  +     +  +     ++ ++S
Sbjct: 609 GF---TVDGQGRKMSKSIGNVVSPQDVMNKLGADILRLWVASTDYTGEMTVS-DEILKRS 664

Query: 447 KENPVFYVQYAYARCRSIFR 466
            +        AY R R+  R
Sbjct: 665 AD--------AYRRIRNTAR 676


>gi|325264990|ref|ZP_08131717.1| glutamate--tRNA ligase [Clostridium sp. D5]
 gi|324029680|gb|EGB90968.1| glutamate--tRNA ligase [Clostridium sp. D5]
          Length = 484

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 135/403 (33%), Gaps = 54/403 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D    +   L +      + 
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIA---KHEGGDFILRVEDTDQERFVEGALDIIYRTLEKT 65

Query: 188 ALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L +++    +G Y G Y++       L  KY+ +L+   +  +        ++++   +
Sbjct: 66  GLIHDEGPDKDGGY-GPYVQSERNASGLYLKYAKQLVEQGD-AYYCFCDKERLESLKTSV 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +D   + +     +             ++ ++     G  +   L  P   TT   D  
Sbjct: 124 SEDGTDIVVYDKHCLGLS----------QEEVEANLAAGRPWVIRLNVPNEGTTTFHDEI 173

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
              +   +  +    D  L+KSDG  TY  A++       +     + +V+ G+++    
Sbjct: 174 YGDITVPNDELD---DMILIKSDGFPTYNFANV------IDDHLMEITHVVRGNEYLSSA 224

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSV 422
            +   +  A         V +     L  D    K+SKR G   +   ++++  V    V
Sbjct: 225 PKYNRLYQAFGWD-----VPVYVHCPLITDENHKKLSKRCGHS-SYEDLIEQGFVSEAVV 278

Query: 423 RFMML--WRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
            F+ L  W        F      +  +  + N       A      +     +    +DF
Sbjct: 279 NFVALLGWSPADTQEIFSLEGLVEAFDYHRMNKSP----AVFDTVKLKWMNGEYLKAMDF 334

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAE--------YPRVIENA 512
           D F     P   E  T +  L   +A         +P + E  
Sbjct: 335 DTFYEMAEPYLKECITKDYDL-KKIAGLIKTRIEIFPDIREQV 376


>gi|307266904|ref|ZP_07548423.1| glutamyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918061|gb|EFN48316.1| glutamyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 479

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 123/407 (30%), Gaps = 73/407 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     +G +      ++D   Q             + 
Sbjct: 9   APSPTGSLHIGGARTALFNWLFAR---HNGGKFILR--VDDTDLQ--RSTEESMKGILEG 61

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  EG            +  ++Y        EE        +  +  ++ +R  
Sbjct: 62  LRWLGIDWDEGPI-------YQSQRIEEYRKFANKLLEEGKAYYC--FCTKEELEEMRKQ 112

Query: 249 LKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +               + G   +  ++ I+   RQG      L  P+   T   D+ R 
Sbjct: 113 AEKEGRPP--------MYTGKCRNLTKEQIEEHLRQGRKPVIRLKVPQQGKTVVHDVIRG 164

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F ++   D +   ++KSD   TY   + A     Y+ G  ++I     +H     + 
Sbjct: 165 DVEFDNSTFDDFI---IMKSDNMPTY---NFATVVDDYQMGITHVIR--AEEHLSNTPKQ 216

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG---------------DFITLRH 412
             +  A+  +  Q        V +       K+SKR G                 +    
Sbjct: 217 ILIYEALGVEIPQFAH-----VSMVLAPDRSKLSKRHGATSVQEFRDQGYLPEAIVNYIT 271

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++  +  D      + +   E   F   +V +    NP  Y                   
Sbjct: 272 LLGWMPKDGEEIFDVSKSIKE---FTLERVSK----NPAVYDVQKLTWIN------GHYI 318

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV--IENATIAQE 517
            + D D     VIP           LI    +Y  +  I +A   +E
Sbjct: 319 RNYDLDKLTEAVIPFL-----KAKNLIREDFDYDYIKKIVSAVRERE 360


>gi|260495113|ref|ZP_05815242.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197556|gb|EEW95074.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 887

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 77/267 (28%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G         + AG         +  + +      +  L +          +  + 
Sbjct: 69  NRMTGKNTLWMPGCDHAG---------IATQNKVERKLAEDGLKKENIGREKFIEMTWDW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II   L+ L    D          G    +
Sbjct: 120 KEKYG------------------------GIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPP-------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           R I ++L   G +Y+G                 +   +++   L+       + D  ++ 
Sbjct: 156 RKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHVEKDGHLWEIKYPVKNSDEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATSRPETMLGDVAVAVHPEDERYKHLI 242



 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEYGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      ++  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNNDEDK------KISKLTAQYMLWTVLEQGLRLL 691


>gi|257126047|ref|YP_003164161.1| glutamyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049986|gb|ACV39170.1| glutamyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 501

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 132/400 (33%), Gaps = 64/400 (16%)

Query: 128 VSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           ++ +PTG  HVG     +          GD +  +      +  R  +  D+  QI    
Sbjct: 10  IAPSPTGDPHVGTAYIGLFNYAFAKHNSGDFILRI-----EDTDRTRFSGDSEQQI---- 60

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
              F   +    N D     G   G Y +     +   Y+ +L+   E  +        +
Sbjct: 61  ---FDAMKWLGLNYDEGPDVGGEAGPYRQSERFSIYKDYAEQLVEKGE-AYYCFCTAERL 116

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q + +      +A                   +  ++ ++     G  Y   L  P    
Sbjct: 117 QKLRERQAAMKQAPGYDGHC-----------RNLSKEEVEAKLAAGEPYVIRLKMPYEGE 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  R ++ F ++ +    D+ LLKSDG  TY    LA     +  G  ++I     
Sbjct: 166 TVVNDGLRGEIRFENSKID---DQVLLKSDGFPTYH---LANIVDDHLMGITHVIR--AE 217

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           +      +   +  A    + +        + L R+    K+SKR  + ++L +  +E  
Sbjct: 218 EWISSTPKHIQLYKAFGWDEPK-----WYHMPLLRNADKTKISKRK-NPVSLNYYKEEGY 271

Query: 417 VGSDSVRFMMLW----RKNSELL-------DFDFCKVKEQSKENPVF-YVQYAYARCRSI 464
           +    + F+ L      +N E+        +F F K+   S   PVF  V+  +     +
Sbjct: 272 LKEGLLNFLALMGWSFGENKEIFTIDEMIQNFSFDKI---SLGGPVFDLVKLGWVNNHHM 328

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             +  D    L    F +    +       E   +  + E
Sbjct: 329 RLKDLDELTKLAIPYFVQAGYYENENLSDEEFAKLKRIVE 368


>gi|257081388|ref|ZP_05575749.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989418|gb|EEU76720.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 470

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|255524399|ref|ZP_05391356.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187519|ref|ZP_06855914.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255511956|gb|EET88239.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048041|gb|EFG87480.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 471

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 106/323 (32%), Gaps = 48/323 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +  D L   + + GYEV     I D G                        L
Sbjct: 38  HIGNLRTYIFEDVLKKSLRYLGYEVKHVMNITDVGH-----------------------L 74

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G     +G +  +K   E+  F E  +L   K  +V+    I R      ++ +
Sbjct: 75  QSDADEGEDKMELGAKRENKSVWEIAKFYENAFLDDCKKLNVETPTVICRATEHIDDMIN 134

Query: 257 DIFISEDDFHRGDP-SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LL 310
            I   E+  +       +   ID       +    +   ++    + D ++K      L 
Sbjct: 135 LIKKLEEKGYTYISNGNVYYEIDKFEDYNKLANLSMEELEAGNRVEVDENKKNPLDFVLW 194

Query: 311 FRSTMVGDDV---DRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSG--Y 363
           F ++   + +   D P  +    +    + ++  Y   + +          G DH    +
Sbjct: 195 FTNSKFKNQIMQWDSPWGRGFPGWHLECSAMSMKYLGERIDVHCG------GVDHIPVHH 248

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
              +     A+  K     +    LV         KMSK  GDF+T+  + +E       
Sbjct: 249 TNEIAQSEGAIGHKWVNYWMHGEFLVLDS-----GKMSKSKGDFLTVNKLEEEGFNPLVY 303

Query: 423 RFMMLWRKNSELLDFDFCKVKEQ 445
           R+  L  +  + L F F  +K+ 
Sbjct: 304 RYFCLQSRYRKQLLFSFDALKDA 326


>gi|83644751|ref|YP_433186.1| valyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83632794|gb|ABC28761.1| valyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 952

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 60/209 (28%), Gaps = 40/209 (19%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
            +       +G   +I     N TG +H+GH     + D L       G +   +   + 
Sbjct: 21  EQGFFKPSQQGEPFSIMIPPPNVTGSLHMGHAFQDTIMDALTRYYRMQGRDTLWQVGTDH 80

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG     +                               V ++LA +      +   E +
Sbjct: 81  AGIATQMV-------------------------------VERKLAAEEDKTRHDLGREAF 109

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L  V ++  ++   I R  L+ +    D          G    ++++   L     +Y G
Sbjct: 110 LKKVWEWKAESGGTITRQ-LRRMGASVDWSRERFTMDEGFYKAVQEVFVRLHDDKLIYRG 168

Query: 290 --------ILPPPKSKTTQKCDMDRKQLL 310
                    L    S      + ++ +L 
Sbjct: 169 KRLVNWDPKLHTAISDLEVISEDEKGKLW 197


>gi|68009965|ref|XP_670556.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56485924|emb|CAI02877.1| hypothetical protein PB300955.00.0 [Plasmodium berghei]
          Length = 64

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 9/66 (13%)

Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578
           ++LA Y YDL + F   + + +           N + T  RL L     S++   L ++G
Sbjct: 7   HRLAEYTYDLTTTFTTFYENCKVL---------NSENTKSRLILCSITKSLLYICLQLLG 57

Query: 579 VESPNE 584
           +++  +
Sbjct: 58  MKAIEK 63


>gi|308176323|ref|YP_003915729.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743786|emb|CBT74758.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 483

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 99/331 (29%), Gaps = 39/331 (11%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +  A   G  HVGH R A+V D L   + + G+ VT    + D   +I            
Sbjct: 28  YCGATVQGMPHVGHVRSAIVFDVLVRWLEYRGFAVTTVRNVTDIDDKI--------LEKS 79

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
              +  D +    Y P      +      +++         +     +       M  + 
Sbjct: 80  ANSFAEDFEADAHYRPREEWYALAYRFEQEFARAYEALGVRRPTYEPRATGHITEMHELI 139

Query: 247 DDLKALNIQH-------DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             L      +       D++     + +      R  ID++             P S   
Sbjct: 140 SQLIERGHAYPAADDSGDVYFDVRSYEQYGA-LTRQKIDDMQD----------APDSDPR 188

Query: 300 QKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            K D     L      +         P  +    +    + +A      E  FD  I+  
Sbjct: 189 GKKDPRDFALWKGLKDIDPPTASWPSPWGRGRPGWHLECSAMAGKYLGSE--FD--IHGG 244

Query: 357 GSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D    + +   A + A     A   +       +  +G   KMSK  G+ I+   ++ 
Sbjct: 245 GLDLRFPHHENEMAQSNAAGHGFANFWMHNG---MVTYEGE--KMSKSIGNTISPEEMLA 299

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
              +  VR+ +   +   +LD+    + E  
Sbjct: 300 LADARVVRYFLGQAQYRSMLDYRPDSLTEAG 330


>gi|303245786|ref|ZP_07332069.1| glutamyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302493049|gb|EFL52914.1| glutamyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 464

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 99/295 (33%), Gaps = 57/295 (19%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTL 177
            +   + +PTG +H+G  R A+    LA       L+     ++ R             +
Sbjct: 4   IVTRFAPSPTGYLHIGGARTAIFNWLLARHTGGKFLLRIEDTDLVRSN---------ADM 54

Query: 178 ALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             S+    +    ++D ++  +     +Y +++ K L   ++      PEE         
Sbjct: 55  TKSILDAMEWLGLDHDGEITYQSQRFDIYNQYIDKMLETGHAYWCSCTPEE--------- 105

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            V+AM +  R   K L  ++     E     G    +R                L  P +
Sbjct: 106 -VEAMREQARQ--KGLKPKYSGRCREAGLGPGPGRVVR----------------LKAPIA 146

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   DM +  + F +  +    D  L + DGS TY   ++A        G  ++I   
Sbjct: 147 GATVVDDMVKGPVSFDNAELD---DMVLRRPDGSPTY---NMAVVVDDATMGVTHIIR-- 198

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           G DH     R   +  A+     +        V +       K+SKR G    + 
Sbjct: 199 GDDHLNNTPRQILIYKALDLPLPRFGH-----VPMILGPDKKKLSKRHGATAVME 248


>gi|299541905|ref|ZP_07052228.1| glutamyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298725643|gb|EFI66284.1| glutamyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 486

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 100/292 (34%), Gaps = 47/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +                  +Q++ L  
Sbjct: 10  APSPTGYLHIGGARTALFNYLYAKHHNGKFIVRIED----TDIERNVEGGEASQLDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               ++    Y+   D+   Y P  Y +    ++  +++ +LL           K +   
Sbjct: 64  ----KWLGIEYDESIDIGGPYAP--YRQMERLDIYKEHAEKLLEQGV-----AYKCFCSS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R++ KA  +    +               D +      G  Y   +  P++ T 
Sbjct: 113 EKLEASREEQKARGVAAPTYDGTC------RHLSADEVAAKEAAGEPYTIRMRVPENVTY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
           +  D+ R Q+ F S  +GD     L+K++G  TY       +    +  F  + +V  G 
Sbjct: 167 EFEDLVRGQVTFESKDIGDW---VLVKANGIPTYN------YAVVLDDHFMEISHVFRGE 217

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +H     +   +  A   +  +   +      L  +    K+SKR    I  
Sbjct: 218 EHLSNTPKQMMIFDAFGWEYPRFGHM-----TLIINENRKKLSKRDESIIQF 264


>gi|257457527|ref|ZP_05622694.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444913|gb|EEV19989.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 900

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I +     G            +  +     N TG +H+GH    V+ D +    
Sbjct: 17  KDFEDRIYADWEKQGCFKPVKKTAAAGRYVVAIPPPNVTGVLHIGHGLNNVLQDVV---- 72

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                        RY +   +    LP   + G+  ++V +   
Sbjct: 73  ----------------------------IRYHRMKGDETLWLPGTDHAGIATQNVVERQL 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E +L    +   +    II + L+ +    D          G    +R
Sbjct: 105 KAEGKTRHDLGREAFLKRTWEVKEKHH-AIITNQLRKIGASVDWSRERFTMDEGLSHAVR 163

Query: 275 DIIDNLARQGYVYEG 289
            +  +L  +G +Y G
Sbjct: 164 TVFVSLYERGLIYRG 178


>gi|281412859|ref|YP_003346938.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373962|gb|ADA67524.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 919

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 75/227 (33%), Gaps = 37/227 (16%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAV 370
           RS     D     + S  S+ Y          + +  F   +Y+ GSD   G+      +
Sbjct: 515 RSFEKMLDTLDVWIDSGASFEYITTK------REDHPFPLDMYLEGSDQHRGWFHSSIFL 568

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A A         VL    +   +D    KMSK  G+ +    VV++ G++ +R  +    
Sbjct: 569 AVAKRGSAPYKEVLTHGFI---KDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSD 625

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               +      V++Q++          Y + R+ FR         D +L   + +P E  
Sbjct: 626 YFNDIKISMRIVEQQTE---------VYRKIRNTFRFLLGNLEGFDPEL---DRVPYEKL 673

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
                  L         +I+ AT   +      Y       F   ++
Sbjct: 674 LTIDRWAL----GRLQEIIKRATEYYD-----SY------EFSKVYN 705


>gi|163754563|ref|ZP_02161685.1| glutamyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161325504|gb|EDP96831.1| glutamyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 503

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 14/219 (6%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + F + +PTGP+H+G  R A+     A      G +        D    +      
Sbjct: 3   KKVRVRF-APSPTGPLHIGGVRTALFNYLFA---KKHGGDFVLRIEDTDQNRFVEGAEQY 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +      D  + +    G Y +   K L  +Y+  L++     +      +    
Sbjct: 59  IIEALEWCGIPFDEGIGKDGGFGPYRQSERKHLYKQYADFLIDKGHAYY-----AFDTAE 113

Query: 241 MMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +   R D +A        + +             ++   L   G  Y      P+ +T 
Sbjct: 114 TLDAHRKDHEAKGKTFIYNWHNRLKLTNSLSLSAEEVSAKLNA-GEPYVIRYKSPQDETL 172

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
              D+ R  +   + ++    D+ L KSDG  TY  A++
Sbjct: 173 HLKDIVRGDVEIDTNILD---DKVLYKSDGMPTYHLANI 208


>gi|78777263|ref|YP_393578.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497803|gb|ABB44343.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 644

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 83/481 (17%), Positives = 150/481 (31%), Gaps = 79/481 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
             G  H+GH     + DTLA      G +       ++ G +I   A       Q+    
Sbjct: 12  VNGEAHIGHAYTTFIADTLARYEKLKGEDTYFLTGTDEHGQKIEESAQKNSKPTQEFADE 71

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +            K++  E    Y   +     E    + + + V      I  D   
Sbjct: 72  ISASF----------KNLWDEFDISYDKFIRTTDAEHKKGVQRAFEVMYAKGDIYKDFYE 121

Query: 252 --LNIQHDIFISEDDFHRGDP----SPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCD 303
               +  + F +E     G+         +I+   +    +  YE  L     +      
Sbjct: 122 GHYCVSCETFFTETQLVDGEFCPDCGRSTNIVKEESYFFRLSKYENALLKHYEENPDFIL 181

Query: 304 MDRKQLLFRSTMVGDDVDRPL--------------LKSDGSYTYFAADLAYFKCKYERGF 349
              +     + + G   D  +              +K D    Y   D A        G+
Sbjct: 182 PRSRANEVINFVKGGLRDLSVTRTSFTWGVGMPNSIKDDKHVMYVWLD-ALMNYITALGY 240

Query: 350 ----DNMIY------VMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGM 396
               +NM Y       +G D    + R  A+   A  +S     +   +       RDG 
Sbjct: 241 GTTEENMRYWPASVQFVGKD----ILRFHAIYWPAFLMSIDLP-LPQHIGAHGWWTRDGE 295

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ I+ + V D  G +++R+ ML R+     D DF +     + N       
Sbjct: 296 --KMSKSKGNVISPKQVADVYGVENLRYFML-REVPFGQDGDFSQRAFIDRINSELSNDL 352

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT--- 513
                R I           DF++   NV+    ++   E+  +        V+ ++    
Sbjct: 353 GNLLNRII----GMSGKYSDFEIESVNVL----KYHKKEIDAM-------NVVLDSLDIF 397

Query: 514 -IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
               + ++   YL +L  +F     +        +V+  + K     L  V  VA+I+  
Sbjct: 398 MKNFQTHR---YLEELWKLFSI--GNKAIEEHAPWVKMKDGKKDEA-LSTVALVANILAK 451

Query: 573 G 573
            
Sbjct: 452 A 452


>gi|227495095|ref|ZP_03925411.1| valine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831547|gb|EEH63930.1| valine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 886

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 34/185 (18%)

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R      A+  K A ++  +        D    KMSK  G+ +T   +++  GSD+VR
Sbjct: 574 VVRAHLEFDALPWKHALLSGWIL-------DPDRKKMSKSKGNVVTPMGLLETHGSDAVR 626

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +     +      FD  ++K   +            +  +  + A  +  + D DL P N
Sbjct: 627 YWAASARLGTDTAFDESQMKIGRRL---------AIKVLNASKFALTMGSEADLDLNPIN 677

Query: 484 VIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLASVFHGHWSHGR 540
           V     E D S + +L+        VIE AT A E +    Y    +++  F   W+   
Sbjct: 678 VT---EELDRSVIGELVK-------VIETATNAFEAF---DYTRALEVSETF--FWTFCD 722

Query: 541 ENPRL 545
           +   L
Sbjct: 723 DYLEL 727


>gi|210629937|ref|ZP_03296184.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
 gi|210160754|gb|EEA91725.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
          Length = 533

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 113/354 (31%), Gaps = 74/354 (20%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI------------ 174
           +V+A+P    H+G     ++ D  A     +GY V     +++ G ++            
Sbjct: 15  YVNADP----HLGTAYSTIIADVQARYRRAAGYSVKFLTGMDEHGQKVAEAAEKHGMTPQ 70

Query: 175 ---------------------NTLALSVFWRYQQALYNNDSDLPEGYY--PGVYLKHVGK 211
                                +    +   R ++A+      + E  Y   G Y      
Sbjct: 71  EWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIYKGSYDGWYCV 130

Query: 212 ELADKYSSELLNFPEEKW--------------LPIVKDYSVQAMMKIIRDDLKALNIQHD 257
                ++   +   +E                L  VK+ S    +   +D L AL  +H 
Sbjct: 131 PDETFFTETQVEKADEARGTEGQHLCPDCHRPLERVKEESWFFKLSAFQDKLLALYDEHP 190

Query: 258 IFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            F+  D       S +   +++L+  +     GI  P   +       D       +   
Sbjct: 191 DFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDDEHVTYVWFDALTNYMTAVGY 250

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G + D             AAD AY +   +        ++G D    +     A+  A+ 
Sbjct: 251 GQEGDEA-----------AADFAY-RWPAQTH------IVGKDIIRFHCVIWPAMLMALG 292

Query: 376 EKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           E   +       L V+    G   KMSK  G+ I  R V++++G +  R+  + 
Sbjct: 293 EALPEHVFAHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMT 346


>gi|191639512|ref|YP_001988678.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|190713814|emb|CAQ67820.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|327383610|gb|AEA55086.1| Methionyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386801|gb|AEA58275.1| Methionyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 660

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                   +    +  L  
Sbjct: 16  PSGKLHIGNAYTTIAADVLARYKRLMGYDVF-----------------FLTGTDEHGLKI 58

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  ++L    +K++       V+A+  I+   +K 
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLW--KMLEITNDKFIRTTDKEHVEAVQTIVERLIKQ 116

Query: 252 ----LNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L      +  ED+ +  +   S +    D     G    G       + +    M 
Sbjct: 117 GDVYLGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMS 176

Query: 306 RK--QLLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIY 354
           +   +LL       D V     K++    +      DLA  +  +  G        +++Y
Sbjct: 177 KYTDRLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVY 236

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                +DH+ + K   A    + ++  + +++   ++ +         
Sbjct: 237 VWVDALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKK 296

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 297 IYAHGWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMR 338


>gi|126656563|ref|ZP_01727824.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622249|gb|EAZ92956.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 907

 Score = 47.6 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P            +   +  +   +G    I     N TG +H+GH     + D L   
Sbjct: 13  DPKTTESKWQDAWDTHQVFKADNSKEGKTYCIVIPPPNVTGTLHMGHAFGDCLMDVLVRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY           G    ++A+      Q                G+  K +G+E 
Sbjct: 73  HRMCGYNTLCLP-----GTDHASIAVHTILDKQLKAE------------GITRKDIGRET 115

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E+ W    K  S   ++  +    K + +  D          G    +
Sbjct: 116 ----------FLEKAWQ--WKQESGGKIVNQM----KRIGLSADWSRERFTLDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 160 RTAFVKLYEAGLIYRG 175



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 102/295 (34%), Gaps = 26/295 (8%)

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           NF  ++W  + +D+ ++     I   L     Q   +    + +         I+ +   
Sbjct: 386 NFVPKRWEKVYRDWLIKLKDWCISRQLW-WGHQIPAWYVISETNGEIADNTPFIVAHSEE 444

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +    E       +    + D D     F S +           ++   TY      Y  
Sbjct: 445 EAL--EKAKKEYGNDIQLEQDPDVLDTWFSSGLWPFSTLGWPENTEDLNTY------YPT 496

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                GFD +I+         V R+  +A   +++    +V +  LV   RD    KMSK
Sbjct: 497 STLVTGFD-IIFFW-------VARMTMMAGYFTDQMPFKDVYIHGLV---RDENGKKMSK 545

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
            A + I    ++++ G+D++R+ ++        D      ++  +   V     +     
Sbjct: 546 SANNGIDPLILIEKYGTDALRYTLIREVAGAGQDISLQYDRKTDQSESVEA---SRNFAN 602

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            ++  A+ +   L  +       P+  + + S+  +   L+ + + ++      E
Sbjct: 603 KLWNAARFVMMHLKGETPQSLGTPEIDKLELSDKWI---LSRFHQTVQQTREDIE 654


>gi|330686235|gb|EGG97847.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 111/334 (33%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++     +
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVI---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  + L  +  ++ + Y    Y       +    S+  +    ++ +  +K 
Sbjct: 73  KLI-----KRSKELNESVPEIADKYIKAFYEDVGALNVKKATSNPRVMNHMDEIIDFIK- 126

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  K++ +   A     D++     F           ID+L          +    
Sbjct: 127 -------KLVDEGY-AYESNGDVYFRTRQFKDYG-KLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  +    +    + +A+     E G    I+ 
Sbjct: 169 EAGDQKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            E+  D +RF M+       ++++   V      
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNLELVSAAKSG 314


>gi|325845954|ref|ZP_08169152.1| glutamate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481860|gb|EGC84892.1| glutamate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 493

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 101/291 (34%), Gaps = 34/291 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       L+     + TR +        + TL  S  
Sbjct: 9   APSPTGYLHIGGLRTALFNYLYARHTGGKMLLRIEDTDRTR-FVEGALENLLKTLKWSGI 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  + + + ++ E    G Y++   V   + DKY  +L+   +  +        +  
Sbjct: 68  EIDEGVMLDENGEVTEKGDCGPYIQSDRVKAGIYDKYIEKLIEEGK-AYYCFCSKERLDN 126

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    + D   L  ++D               + +  + +A  G  Y   L  PK     
Sbjct: 127 LRARQKAD--GLTPKYDGLCR--------SLTLEEAKEKIA-NGEKYTVRLKLPKDTDIS 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + ++ F +    D  D+ L+K DG  TY     A     +E G  ++  V G + 
Sbjct: 176 FEDRIKGKITFNTN---DMDDQVLIKEDGYPTYHF---AVIVDDHEMGITHV--VRGDEW 227

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                +   +  A   +  +        +    +    K SKR GD +   
Sbjct: 228 ISSTPKHVFLYQAFGWEAPEYIH-----LPTVLNKDHKKYSKRNGDGMVED 273


>gi|294789095|ref|ZP_06754334.1| valine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482836|gb|EFG30524.1| valine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 946

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 76/270 (28%), Gaps = 46/270 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +             Y      K    +I+    N TG +H+GH     + D LA  
Sbjct: 6   NPSEIETKHYQNWEQN-GYFAADFSKSQSFSIQLPPPNVTGTLHMGHAFNQTIMDGLARY 64

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               GY        + AG   QI                             V  + +  
Sbjct: 65  YRMKGYNTCWIPGTDHAGIATQI-----------------------------VVERQLAA 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   ++     +   E++L  V ++   +    I   ++ +    D              
Sbjct: 96  QNISRH-----DLGREQFLEKVWEWKNISG-GTITQQMRRVGCSADWAREYFTMDETRAE 149

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +  +   L  QG +Y G        +L    S    +       +      + D+ D  
Sbjct: 150 AVTAVFVKLYNQGLIYRGKRLVNWDPVLGTAVSDLEVENVETDGSMWHIRYPLADNPDEA 209

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           ++ +         D+A      +  + ++I
Sbjct: 210 VVVATTRPETLLGDVAVAVHPEDERYTHLI 239


>gi|323527126|ref|YP_004229279.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384128|gb|ADX56219.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 945

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQAGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTE-- 670

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  +Y R R+  R       D D++   R V     E D   + L  +L     ++
Sbjct: 671 -------SYRRIRNTLRFLLANLSDFDYEKNARPV-DDWLEIDRYAVALTANLQ--NEIL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YDKYEFHPVV 732


>gi|193216382|ref|YP_001997581.1| glutamyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|238692725|sp|B3QYR1|SYE_CHLT3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|193089859|gb|ACF15134.1| glutamyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 503

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 105/294 (35%), Gaps = 22/294 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A     +G +        D    +     ++    + A
Sbjct: 11  APSPTGYLHVGGLRTALYNFLFA---KKNGGQFLLRLEDTDRARLVEGAVENLLSSLEWA 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y++    ++  +Y  +LL+  +  +     D   ++    I+  
Sbjct: 68  GIIPDESPKHGGDFGPYVQSERLDIYKQYVQQLLDEKKAYYCFATPDELEESRQLQIKQG 127

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           ++     +  ++ ED       S I+  +D     G      +  P     +  D+ R  
Sbjct: 128 VQ--PKYNRKWLPEDMGGSMPQSEIQKRLDA----GEPCVIRMKIPDHTRIRHDDIIRGI 181

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F S+ V    D+ L+KSDG  TY    LA     +     ++I   G +      +  
Sbjct: 182 VWFDSSTVD---DQVLMKSDGFPTYH---LASVVDDHLMNITHVIR--GEEWLSSTPKHL 233

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            +      +K +        + L  +    K+SKR GD     ++      D++
Sbjct: 234 LLYDFFGWEKPEFAH-----LPLLLNPDRSKLSKRQGDVAVEDYMAKGYSKDAL 282


>gi|148263856|ref|YP_001230562.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146397356|gb|ABQ25989.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 886

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +       S   +    +      +I     N TG +H+GH     + D L    
Sbjct: 12  PKSVEEKWYKEWESNGYFHGEAVSAKPSYSIVIPPPNITGVLHMGHALNNTLQDILCRWK 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SG+ V                           L+   +D        V  + +  E  
Sbjct: 72  RMSGFNV---------------------------LWMPGTDHAGIATQNVVERQLSAEGK 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++     +   E ++  V  +  ++  +II   LK L    D          G    +R
Sbjct: 105 DRH-----DVGREAFIERVWQWKAESGGQIIGQ-LKRLGASCDWERERFTMDEGLSRAVR 158

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +G +Y  
Sbjct: 159 EVFVRLYDEGLIYRD 173


>gi|256761895|ref|ZP_05502475.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683146|gb|EEU22841.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 470

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE        Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAVAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|255014722|ref|ZP_05286848.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 505

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 103/294 (35%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G ++     I D  +Q    
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQNGGDMILR--IEDTDSQ--RF 52

Query: 178 ALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                    +AL        E    G   G Y +   +E+  KY  +LLN          
Sbjct: 53  VPGAEDYIIEALTWLGIKFDEGVSFGGNYGPYRQSERREIYKKYVDQLLNDG-----HAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +   A ++  R ++     Q+D   S     R   +  ++ + +L   G+ Y      
Sbjct: 108 IAFDTPAELEEKRKEIANF--QYD--ASTRSQMRNSLTLSQEEVQSLIESGHQYVVRAKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
             ++     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPNEDIHVNDLIRGEVVINSSILD---DKVLYKSADQLPTYH---LANIVDDHLMEVTHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +      K    +     L+         K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRFFGWKDTMPSFAHLSLLLKPEG--NGKLSKRDGD 267


>gi|269121949|ref|YP_003310126.1| glutamyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268615827|gb|ACZ10195.1| glutamyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 504

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 99/296 (33%), Gaps = 47/296 (15%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIN 168
            +G +V +  ++ +PTG  HVG     +          GD L  +      +  R  +  
Sbjct: 1   MEGKRVRVR-IAPSPTGDPHVGTAYIGLFNYAFAKKNNGDFLLRI-----EDTDRTRFSA 54

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D+  QI     ++ W         D     G   G Y +     +  +Y+ +L+   E  
Sbjct: 55  DSEQQIFD---AMHWLGLNYDEGPDV----GGAKGPYRQSERFHIYKEYAEKLVEKGE-A 106

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +        +  + +      +A             + R   +   + +     +G  Y 
Sbjct: 107 YYCFCTPERLSKLRERQIAMKQAPG-----------YDRHCRNLTDEEVKQKLAEGVSYV 155

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
             L  P    T   D  R  ++F ++ +    D+ LLKSDG  TY    LA     Y   
Sbjct: 156 IRLKMPYEGDTVVHDELRGDIVFENSKID---DQVLLKSDGFPTYH---LANIVDDYLME 209

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             ++I     +      +   +  A   ++ +        + L R+    K+SKR 
Sbjct: 210 ITHVIR--AEEWIASTPKHIQLYKAFGWEEPK-----WYHMPLLRNADKSKISKRK 258


>gi|172041055|ref|YP_001800769.1| valyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852359|emb|CAQ05335.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 928

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 87/269 (32%), Gaps = 42/269 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   L    VS   +  +        +I     N TG +H+GH     + D ++  
Sbjct: 27  NPSDVESELYEGWVSAGYFKADAASDKPPFSIVLPPPNVTGRLHMGHALDHTLIDAMSRR 86

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV             +   ++   R                        V  +L
Sbjct: 87  RRMQGYEVL-------WLPGSDHAGIATQTR------------------------VESDL 115

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             + S +  ++  E+++  V ++       +I+  ++A+    D          G    +
Sbjct: 116 KKRESKDRFDYGREEFIERVWEWK-DEYGGLIQQQMRAIGDSVDWSRERFTLDEGLSRAV 174

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L  QG +Y+       S   Q           D++ + +  R   + DD    +
Sbjct: 175 QTIFKALFDQGMIYQDNRMVNWSPVLQTAISDIEVNYEDVEGELVSLRYGSLNDDEPHVI 234

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +    T    D+A      +  + +++
Sbjct: 235 VATTRVET-MLGDVAVAVHPEDERYADLV 262


>gi|114564054|ref|YP_751568.1| isoleucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335347|gb|ABI72729.1| Isoleucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 943

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 118/338 (34%), Gaps = 63/338 (18%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             L    + KW+P      ++ M++      I R     + I   +    D+ H    S 
Sbjct: 439 QALKEIEQTKWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETDELHPDSVSL 498

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD---- 328
           +  +   + +QG                  D++       S ++GD+ D+    +D    
Sbjct: 499 MERVAHRIEQQG-------------IQAWWDLEA------SELLGDEADQYRKVTDTLDV 539

Query: 329 --GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLL 385
              S + F++ +A     +  G D  +Y+ GSD   G+      ++ A++ K     VL 
Sbjct: 540 WYDSGSSFSSVVAARPEFH--GHDIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLT 597

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
                   DG   KMSK  G+ I    V++++G+D +R  +     S  +     ++  +
Sbjct: 598 HGF---TVDGKGRKMSKSVGNVIAPLQVINKLGADILRLWVAATDYSGEMTVS-DEILNR 653

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQL----I 499
           S +        AY R R+  R          F L   N    E++   SE  + L    +
Sbjct: 654 SAD--------AYRRIRNTAR----------FLLANLNGFNPETDMIASEDMVALDRWVV 695

Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
              A   + I  A      + +   L    S      +
Sbjct: 696 RRAAVLQQEIIEAYDQYNFHLVTQKLMQFCSVELGSFY 733


>gi|315617671|gb|EFU98277.1| valyl-tRNA synthetase [Escherichia coli 3431]
          Length = 951

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWDRERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|306828581|ref|ZP_07461776.1| glutamate--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429380|gb|EFM32465.1| glutamate--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 486

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 113/336 (33%), Gaps = 50/336 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +            I      G +    L   ++  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSE------EKKAAYIAEREAAGIIPTVRLAVNEAGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   V  A+  +  +       +  +       K+SKR  + +       + G
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIEDYRKKG 274

Query: 419 --SDSV-RFMMLWRKNS--ELLDFDFCKVKEQSKEN 449
             S++V  F+ L   N   E   F   K+ +   EN
Sbjct: 275 YLSEAVFNFIALLGWNPGGEDEIFSREKLIKLFDEN 310


>gi|283954416|ref|ZP_06371936.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794033|gb|EFC32782.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 400

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 124/392 (31%), Gaps = 75/392 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+                    YI      ++ +         + 
Sbjct: 5   APSPTGDMHIGNLRAAIF------------------NYICARQKNMDFILRIEDTDKARN 46

Query: 189 LYNNDSDLPEGY-YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           +   + ++ E     G+  +H   +  +      +             +  +  +KI ++
Sbjct: 47  IAGKEEEIKELLNLFGISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELKIKKE 106

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             K  N  +         + G    + DI      + +V   I     + T +  D  + 
Sbjct: 107 LAKKQNKAYR--------YDGTCEKLADIDVLGCEKPFV---IRLKKPTHTMKFVDFIKG 155

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +L F    +       ++++D + TY   + A            +I   G DH     + 
Sbjct: 156 ELSFEPENID---SLVIMRTDKTPTY---NFACAVDDMLENVTCIIR--GEDHVSNTPKQ 207

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITLRHVVD 415
           E + A++   KA     L  ++        +KMSKR                  + + + 
Sbjct: 208 EHIRASLGYNKAMTYAHLPIILNE----EGVKMSKREAHSSVKWLLESGILPSAIANYLI 263

Query: 416 EVG----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            +G           +++++  + + +     FD  K+ + ++E             + I 
Sbjct: 264 MLGNKTPCEIFTLEEAIKWFDISKVSKAPARFDLKKLLQINRE-----------HIKMIT 312

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
               +   DL+ DL        +      EL+
Sbjct: 313 DNELNKILDLNKDLAQLAKFYTQEASTIKELK 344


>gi|169350153|ref|ZP_02867091.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
 gi|169292936|gb|EDS75069.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
          Length = 878

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 52/179 (29%), Gaps = 33/179 (18%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +Y           +I     N TG +H+GH     + D +       GY+          
Sbjct: 31  KYFEAGDTSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDAL-------W 83

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
              ++   ++   + +  +        +    G   K       ++Y+S           
Sbjct: 84  LPGMDHAGIATQAKVEARMQEEGVSRYDLGREGFLKK--AWSWKEEYAS----------- 130

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                        IIR   + L +  D          G    ++++   L  +G +Y+G
Sbjct: 131 -------------IIRSQWEKLGLSLDYSKERFTLDEGLSEAVKEVFVKLYNEGLIYQG 176



 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 59/161 (36%), Gaps = 35/161 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G VY G   PPK     K D D     F S      T+   + D  L K      YF
Sbjct: 425 KETGEVYVGK-QPPKDIENWKQDEDVLDTWFSSALWPFSTLGWPNEDSELFKR-----YF 478

Query: 335 AADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                        G+D +I+   S     S +            +++   NVL+  L+  
Sbjct: 479 PT------NTLVTGYD-IIFFWVSRMIFQSLHFT----------DQRPFENVLIHGLI-- 519

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            RD    KMSK  G+ +    V+DE G+D++RF +      
Sbjct: 520 -RDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAP 559


>gi|315288383|gb|EFU47781.1| valyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 925

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|254704289|ref|ZP_05166117.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754957|ref|ZP_05998666.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261744710|gb|EEY32636.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 515

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L N++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|226939543|ref|YP_002794616.1| Syi [Laribacter hongkongensis HLHK9]
 gi|259511507|sp|C1DCX2|SYI_LARHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226714469|gb|ACO73607.1| Syi [Laribacter hongkongensis HLHK9]
          Length = 957

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 77/250 (30%), Gaps = 38/250 (15%)

Query: 292 PPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------GSYTYFAADLAY 340
           P       +K +       F    + ++G+D  R     D        G+  +       
Sbjct: 522 PELLEAVARKVEEQGINAWFELDPAELLGEDAARFDKMKDTLDVWFDSGTTHFHVLR-GT 580

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
              +     D  +Y+ GSD   G+         A+  +     +L    V    DG   K
Sbjct: 581 HAEQLAYPAD--LYLEGSDQHRGWFHSSLLTGCALDGRAPYNQLLTHGFVV---DGQGRK 635

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I  + + D +G+D +R  +     S  L      + + + +        +Y 
Sbjct: 636 MSKSVGNVIAPQKINDSLGADILRLWVASTDYSGELAIS-DTILKGTTD--------SYR 686

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+  R       D +       V  + +E D   L L   L               P 
Sbjct: 687 RLRNTIRFLLANLSDFNPATDALPV-SELTELDRYALVLAQRLH------AGVAEDCYP- 738

Query: 520 KLAFYLYDLA 529
               Y +  A
Sbjct: 739 ---RYAFHTA 745



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 23/203 (11%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P +L +  +      +   R +     K  +        G +H+GH    ++ D +    
Sbjct: 25  PGWLAQWQAQQRYQKL---RKIAAGRPKFILHDGPPYANGDIHIGHAVNKILKDIIVRSK 81

Query: 155 AFSGYEVTREYYINDA---GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
             +G++     Y+      G  I      +    ++A+    S          Y K  G 
Sbjct: 82  TQAGFDA---PYVPGWDCHGLPIEHQIEKLVKGDKKAIEAAPS---IHARITEYRKANGL 135

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGD 269
           +      ++  + P      + ++Y+    ++  + D   L +  + D       F R +
Sbjct: 136 D------AKATDLPASFIRELCREYA-GLQVERQKKDFIRLGVLGEWDNPYRTMSF-RSE 187

Query: 270 PSPIRDIIDNLARQGYVYEGILP 292
              IR  +  L +QGY+++G+ P
Sbjct: 188 ADEIR-ALGKLYQQGYLFKGLKP 209


>gi|197294544|ref|YP_001799085.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853871|emb|CAM11833.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 439

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 124/385 (32%), Gaps = 60/385 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  +T+   +   G++V     I D   +I   +L    + + 
Sbjct: 28  CGPTVYNHLHLGNARPLIFFNTVKKYLETIGFKVFYVVNITDIDDKIIKSSLQKQTKEEV 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 S   +       LK +  E  + +       P              +M++ I+ 
Sbjct: 88  LAKEYISSFLQL------LKDLNIETINSHPKATNYIP--------------SMIEYIKV 127

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L                       I   I  ++  G +    L   K    +  D ++K
Sbjct: 128 LLDKGFAYFT------------DQGIYFEISKISDYGQLKNQDLTQLKKNARKTLDPNKK 175

Query: 308 Q----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---- 359
           +    +L++ T  G     P     G   +    +   +  ++   D  I+  G+D    
Sbjct: 176 KPGDFVLWKKTSQGVQYQSPWFC--GRPGWHTECVTMIEQIFKTSLD--IHGGGADLKFP 231

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H         +A A + K   +      + RL  D    KMSK  G+ +  + ++    S
Sbjct: 232 HHQ-----NEIAQAKAYKNNNLANFFMHVARL--DFENQKMSKSLGNIVWCKDLLKRFSS 284

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKE---------NPVFYVQYAYARCRSIFRQAKD 470
             ++F +L     + ++F    +K+  K+            FY+Q        +  +  D
Sbjct: 285 SVIKFFILSTHYRKPINFSENLIKQSQKKYDKIMLFLIKNDFYLQIKKKPIVDLEPKIID 344

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSE 495
            F  L  D F  N +    E +  E
Sbjct: 345 SFHRLMKDDFSTNKVIDLIEINIKE 369


>gi|319427210|gb|ADV55284.1| valyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 57/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L     +   +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEAQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|257077300|ref|ZP_05571661.1| cysteinyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 456

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 133/429 (31%), Gaps = 56/429 (13%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G +          ++N+           H+GH R  +  D +A  +   GY V     I 
Sbjct: 8   GQKDEDFKPMHPGRINMFVCGPTVYDHSHIGHARTNIFFDVIAKYLRARGYSVFYLQNIT 67

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D   +I   A     +Y +            +Y   Y      E+  K   + +N+    
Sbjct: 68  DIDDKIINRAAEEGKKYSEV---------ADHYFEEYK-----EIMGKLRIDSINYYARA 113

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I        ++  I+             I E  +       +   +   +  G +  
Sbjct: 114 SLYI------DEIIGQIKK------------IMEHGYAYETADGVYFNVRKFSDYGELSN 155

Query: 289 GILPPPKSKTTQKCDMDRKQ-----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
             +   +         ++K      L  +        + P  K  G   +   D A  + 
Sbjct: 156 QNMDQIRENARGVIKEEKKSPEDFVLWKKMKPGEPFWESPWGK--GRPGWHIEDTAITEA 213

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            +   +D    + G  +       EA  A +     +  +    +     +    KMSK 
Sbjct: 214 YFGSEYD----IHGGGNDLIFPHHEAEIAQMRSVSGKRYLARYWIHTGMVNINKEKMSKS 269

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
             +FI  + ++     + +RF M+    + ++D+    +  +S ++ V  +   Y + + 
Sbjct: 270 LKNFIQTKDILKSYKPEELRFAMINSNYNTVIDYSAQLM--ESSKDAVERINIFYNKMKE 327

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY-------PRVIENATIAQ 516
           +         D +  +   N +  +  FDT    LI     +          I +A  ++
Sbjct: 328 LNSTEGSYNIDAEEIINHFNAV-MDKNFDT--RSLIREFLAFISDANKNMENISSAAASK 384

Query: 517 EPYKLAFYL 525
             + +  Y+
Sbjct: 385 LIH-IVEYV 392


>gi|15965269|ref|NP_385622.1| valyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307309292|ref|ZP_07588960.1| valyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|81634651|sp|Q92Q37|SYV_RHIME RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15074449|emb|CAC46095.1| Probable valyl-tRNA synthetase (valine--tRNA ligase) [Sinorhizobium
           meliloti 1021]
 gi|306900293|gb|EFN30910.1| valyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 947

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 32/199 (16%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D +       G +V  +  
Sbjct: 22  ADAFRAGVNAKPDAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +                               V ++L ++      +   
Sbjct: 82  MDHAGIATQMV-------------------------------VERQLMERQLPSRRDMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  V ++  ++   +I + LK L    D          G    + ++  +L ++G +
Sbjct: 111 EAFIERVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSEAVIEVFVSLYKEGLI 169

Query: 287 YEGILPPPKSKTTQKCDMD 305
           Y            Q    D
Sbjct: 170 YRDTRLVNWDPKLQTAISD 188



 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 78/250 (31%), Gaps = 39/250 (15%)

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           +  L E +Y  V  K + K           NF  + W     ++        I   L   
Sbjct: 392 EPRLTEQWY--VDAKTLAKPAIAAVKEGRTNFVPKNWEKTFFEWMENIQPWCISRQLW-W 448

Query: 253 NIQHDIFISED---DFHRGDPSPIRDIIDNLAR-----QGYVYEGILPPPKSKTTQKCDM 304
             Q   +   D      R +   +   I +        + YV E +L   K       D 
Sbjct: 449 GHQIPAWYGPDGQIFVERNEEEALHAAIQHYIAHEGPMKAYV-EDLLENFKPGEILTRDE 507

Query: 305 DRKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           D     F S     + +G   + P L           D  Y       GFD +I+   + 
Sbjct: 508 DVLDTWFSSALWPFSTLGWPKETPEL-----------DKYYQTDVLVTGFD-IIFFWVAR 555

Query: 360 H---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                 +  +      A        + +      L RD    KMSK  G+ I    ++DE
Sbjct: 556 MMMMGLHFMK-----DADGTPVEPFHTVYVHA--LVRDKNGQKMSKSKGNVIDPLELIDE 608

Query: 417 VGSDSVRFMM 426
            G+D++RF +
Sbjct: 609 YGADALRFTL 618


>gi|99080974|ref|YP_613128.1| glutamyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|122984326|sp|Q1GHK0|SYE1_SILST RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|99037254|gb|ABF63866.1| glutamyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 89/290 (30%), Gaps = 41/290 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +  +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 3   QPVVTRFAPSPTGFLHIGGARTALFNWLFAR---GRGGKFLLRIEDTDRARSTPEATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    ++D ++   +        V  +L  +       F  ++ +   ++ +    
Sbjct: 60  LQGMAWLGLDHDGEVVSQFEGAERHAEVAHQLLAE-GKAYKCFSTQEEIAAFREAAKAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +           D   SE   H   P  IR                +  PK   T  
Sbjct: 119 KSTLFHSP-----WRDTPESE---HPDAPFAIR----------------IKAPKDGETVI 154

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  +  ++  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 155 RDQVQGDVTIKNAQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+        V +   + L       K+SKR G      
Sbjct: 207 MNAARQMMIYEAMGWD-----VPVYAHIPLIHGSDGKKLSKRHGALGAQE 251


>gi|326693075|ref|ZP_08230080.1| glutamyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 505

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 110/334 (32%), Gaps = 41/334 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A+     A    ++G  + R           +   +Q+  LA   
Sbjct: 17  APSPTGHLHIGNARTAIFNWLFAR--HYNGQFIIRIEDTDSARNIADGEKSQLENLAW-- 72

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                   ++   + P  Y P    +   + +   +  ELL           K Y     
Sbjct: 73  ----LGLDWDESPEKPGAYGPYRQSERNAQGIYQPFIDELLAKGL-----AYKSYKTSEQ 123

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQ 300
           +   R+  +A   Q   ++ E   + G     R         QG         P+ K   
Sbjct: 124 LAAEREAQQAAK-QAPHYVYE---YEGLTDEERKAKYAEFEAQGLKPVIRFRVPEEKVYA 179

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ +  +   +  +G   D  + K+DG  TY   + A     +     +++   G DH
Sbjct: 180 WDDIVKGHIEIGAKEIG--GDWVIQKADGMPTY---NFAVVVDDHLMKISHVLR--GDDH 232

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG-- 418
                +   +  A+     +       +  +       K+SKR  + +       ++G  
Sbjct: 233 VSNTPKQMMIFEALGWDVPKFGH----MALIINGETGKKLSKRDENVLQFVEQYKDLGYQ 288

Query: 419 -SDSVRFMMLWRKNSELLD--FDFCKVKEQSKEN 449
               V F+ L   + +  D  F   +  +   EN
Sbjct: 289 PQAMVNFIGLLGWSPKGEDEIFSLEEFTQMFDEN 322


>gi|160876370|ref|YP_001555686.1| valyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160861892|gb|ABX50426.1| valyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268560|gb|ADT95413.1| valyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|21673138|ref|NP_661203.1| glutamyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|22654288|sp|Q9F724|SYE_CHLTE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|21646214|gb|AAM71545.1| glutamyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 503

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 111/315 (35%), Gaps = 43/315 (13%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYIN 168
             G KV   F + +PTG +HVG  R A+          GD +  +      +  +   + 
Sbjct: 1   MAGQKVRTRF-APSPTGYLHVGGLRTALYNYLFAKRMNGDFVIRI-----EDTDQSRKVE 54

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           DA      L  ++ W     +  ++S +  G Y G Y++     +   Y        E+K
Sbjct: 55  DAEK---KLISTLEWA---GIIADESPMHGGNY-GPYVQSQRLSI---YRDYCTRLLEDK 104

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                     +          + L  +++  ++ ED       S I+  +D     G  Y
Sbjct: 105 NAYYCFSTPEELEENRQLQLKQGLQPKYNRKWLPEDMGGNMPESEIKKKLDE----GAPY 160

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              +  P   +    DM R  + F S  +    D+ L+KSDG  TY     A     +  
Sbjct: 161 VVRMKVPDYVSVWFEDMIRGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLM 214

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            F ++I   G +    + +   +      +  +        + L  +    K+SKR GD 
Sbjct: 215 EFTHIIR--GEEWLPSMPKHLLLYEFFGWEPPKFAH-----LPLLLNPDRSKLSKRQGDV 267

Query: 408 ITLRHVVDEVGSDSV 422
               ++     S+++
Sbjct: 268 AVEDYMRKGYSSEAI 282


>gi|330507469|ref|YP_004383897.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928277|gb|AEB68079.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 1053

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 16/170 (9%)

Query: 357 GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D   G+   +L A   +      +  ++    +    D    KMSK  G+ +    VV
Sbjct: 555 GHDQTRGWFYSQLGASMVSFGRAPYKSVLMHGFTL----DDQGRKMSKSIGNIVQPEEVV 610

Query: 415 DEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           +  G+D +RF +L      E L F +  V+  S+   +F+  Y         R A     
Sbjct: 611 ERFGADILRFYVLGANAPWEDLHFSWEAVENTSRMINIFWNAY---------RFALPYMV 661

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             DFDL   ++   +S     +  ++  +      I       + +++  
Sbjct: 662 LDDFDLKRADLDLYKSSLRPEDRWILSRVNSLAEEITAEMEGYQLHRIVR 711


>gi|302335574|ref|YP_003800781.1| valyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319414|gb|ADK67901.1| valyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 900

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 24/193 (12%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKEN 449
           L +DG   +MSK  G+ +    +++  G+D++RF +L    N++ + FD    K+     
Sbjct: 516 LAKDG--SRMSKSKGNGVNPMDLMERYGADAMRFNLLTLITNNQDVKFDANIDKKTHALI 573

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                + A +    I       F  ++ D +       E+  D         L+   R++
Sbjct: 574 DSPRTEQARSFVTKI--WNASRFVQMNLDGYAPGEPKAETPEDAW------MLSRLARIV 625

Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRK-LTMMRLQLVH 564
           + AT A E Y    Y  D+   F   W+       E  + R +     + L   R  LV 
Sbjct: 626 DEATEALEGYAFGDYARDM-QSF--FWNEVCDWYIELCKGRLLGGTPEERLQAQR-NLVF 681

Query: 565 AVASIINSGLNII 577
               ++++ L ++
Sbjct: 682 ----VLDTSLRLL 690


>gi|219846966|ref|YP_002461399.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541225|gb|ACL22963.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 922

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 53/213 (24%), Gaps = 41/213 (19%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L         +            I     N TG +H+GH     + D +       G
Sbjct: 22  EQRLYDWWERSGLFAPRDDAPRPPFVISIPPPNVTGELHLGHAMFVAIEDLMIRWRRMQG 81

Query: 159 YEVTREYYINDAG----AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           Y+       + AG     Q+  L                                     
Sbjct: 82  YQTLWVPGTDHAGIATQTQVEKL------------------------------------L 105

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++  +       E++L    ++  +   +I R  L+ L    D          G    + 
Sbjct: 106 EREGTSRQAVGREEFLRRTWEWKEKYGGEITRQ-LRRLGASCDWSRERFTLDPGLSRAVH 164

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                L   G +Y GI     S   Q    D +
Sbjct: 165 TAFKRLYDDGLIYRGIYLVNWSPKLQTAVSDLE 197



 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 74/208 (35%), Gaps = 33/208 (15%)

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
            E  +  V+D  V+ + +             + +        G   P+      L     
Sbjct: 394 AELAIAAVRDGRVRIVPERFEKVYFHWLEHIEDWCISRQLWWGHRIPVW----YLPDGSI 449

Query: 286 VYEGILPPPKSKTTQKCDMDR----KQLL-FRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           V  G   PP ++  Q  D+        L  F +    DD D      D    Y  + +  
Sbjct: 450 VVPGSDEPPPAEGVQDPDVLDTWFSSGLWPFSTLGWPDDTD------DYRRFYPTSVM-- 501

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                E G+D +++         V R+  +   ++ +     V L  LV   RD    KM
Sbjct: 502 -----ETGYD-ILFFW-------VARMMMMGCYLTGQPPFHTVYLHGLV---RDEHGRKM 545

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           SK  G+ +    VV++ GSD++R+ ++ 
Sbjct: 546 SKSFGNVVNPLEVVEQYGSDALRYTLVT 573


>gi|86144119|ref|ZP_01062456.1| glutamyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85829381|gb|EAQ47846.1| glutamyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 504

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 91/292 (31%), Gaps = 48/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       ++     +  R     E YI +A       
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAKKNNGTFVLRIEDTDQNRYVEGAENYIVEALNWCGI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY---SSELLNFPEEKWLPIVK 234
                  Y +         P   Y     K      A+K          F   + L   +
Sbjct: 69  ------PYDEGPGKEGGFGP---YRQSERKDKYFAFAEKLIASGDAYYAFDTAEALDAHR 119

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               +     I +           + + +           +    +   G  Y      P
Sbjct: 120 KDHEEQGKTFIYN-----------WHNREQLDNSLNLSPEETQKRIEA-GEDYVIRFKSP 167

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S+  +  D+ R  +   ++++    D+ L K+DG  TY    LA     +     ++I 
Sbjct: 168 QSEILELEDLIRGSVEVDTSLLD---DKVLFKADGMPTYH---LANIVDDHLMEITHVIR 221

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             G +    +     +  A   +  Q   L   +  + +     K+SKR GD
Sbjct: 222 --GEEWLPSLALHVMLYRAFGWETPQFAHLPLIMKPVGKG----KLSKRDGD 267


>gi|86131102|ref|ZP_01049701.1| glutamyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818513|gb|EAQ39673.1| glutamyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 505

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 106/285 (37%), Gaps = 34/285 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP+H+G  R A+     A       ++     +  R  Y+  AGA+ + +  S+ 
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKHGGTFILRIEDTDQNR--YV--AGAE-DYIRESLD 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W     +  ++    +G Y G Y +   K++   Y+ +L++     +       S+ A  
Sbjct: 65  WC---GISYDEGPTKDGGY-GPYRQSERKDMYHTYAQKLIDSG-NAYYAFDTAESLDAHR 119

Query: 243 KIIRDDLKAL-NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           K  + + K      H+    ++          + I       G  Y      P+ +  + 
Sbjct: 120 KDHKANGKTFIYNWHNRLKLDNSLVLSQEETKQRI-----AAGDNYVIRFKSPQDEVLKL 174

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  +   + ++    D+ L KSDG  TY    LA     +     ++I   G +  
Sbjct: 175 QDEIRGDMEIDTNILD---DKILFKSDGMPTYH---LANIVDDHLMEISHVIR--GEEWL 226

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +     +  A+     +   L   L  + +     K+SKR GD
Sbjct: 227 PSLALHVLLYRALGWTAPKFAHLPLILKPVGKG----KLSKRDGD 267


>gi|328958763|ref|YP_004376149.1| glutamate--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328675087|gb|AEB31133.1| glutamate--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 489

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 97/302 (32%), Gaps = 33/302 (10%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + + + +PTG +H+G+ R A+     A     +G +        D    I     +
Sbjct: 3   KKVRVRY-APSPTGHLHIGNARTALFNYLFAR---HNGGDFIIRIEDTDLKRNIEG-GEA 57

Query: 181 VFWRYQQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 + L  N  + P+     G Y +   +E+ D    +LL      +     +  ++
Sbjct: 58  SQLENLKWLGMNWDESPDNPGEFGPYRQSERREIYDPLVEQLL-LSNRAYKCYCSEEELE 116

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  R               E   + G   +            G          K  T
Sbjct: 117 EEREAQRAR------------GEMPHYSGKCANLTAKEQKEKEATGIEPVIRYRVIKENT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               D+ +  + F +  +G D    ++K DG  TY       F    +  F  + +V+ G
Sbjct: 165 YNFEDIVKGHISFEAESIGGDF--VIVKRDGMPTYN------FAVSVDDHFMEITHVLRG 216

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  Q       +  +       K+SKR G+ +       E+
Sbjct: 217 DDHIANTPKQLMIYEAFGWEAPQFGH----MTLIINSETGKKLSKRDGNILQFIEQYREL 272

Query: 418 GS 419
           G 
Sbjct: 273 GY 274


>gi|328958761|ref|YP_004376147.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328675085|gb|AEB31131.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 468

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 94/311 (30%), Gaps = 30/311 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  V  DT+   + + GY+V       D   +I   A  +    Q+
Sbjct: 28  CGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYDVAYISNFTDVDDKIIRTAKELDLSAQE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 +D     Y       +G E A  +   + N PE      + D+    + K    
Sbjct: 88  V-----ADKFIEAYH-EDTHALGVEKATHHPRVMENMPE------IVDFIAVLINKGY-- 133

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A  ++ D++     F   D   + DI  +    G            +  +K D    
Sbjct: 134 ---AYEVEGDVYYRTRKF--KDYGKLSDISIDELEVG----ASNRLTVQENNKKEDPLDF 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       + P       +    + +A       +   + I +            
Sbjct: 185 ALWKSAKAEEISWESPWGAGRPGWHIECSVMAT------KYLGDTIDIHAGGQDLTFPHH 238

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A    K          +   +      KMSK  G+ + +  ++ +V    VRF M 
Sbjct: 239 ENEIAQSEAKTGHP-FAHYWMHNGFVTMDNEKMSKSIGNVVLVHDIIKQVDPQIVRFFMA 297

Query: 428 WRKNSELLDFD 438
             +    + ++
Sbjct: 298 TTQYRRPISYN 308


>gi|315038959|ref|YP_004032527.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312277092|gb|ADQ59732.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 804

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 113/347 (32%), Gaps = 60/347 (17%)

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++A   +   +   +  G+ ++   K++ D       N  E+K    ++D          
Sbjct: 366 KEAFTEDGPHINSEFLNGLNIEDAKKKMVDWLEDH--NCGEKKVNYKLRD------WDFS 417

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R           +   ED    G+ + + +  D L  +      I P    ++      D
Sbjct: 418 RQRY--WGEPIPVIHWED----GETTLVPE--DQLPLRLPHATDIKPSGTPESPLANLTD 469

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGS 358
              ++ ++   G      +    GS  Y+   +     K    +D +       +Y+ G+
Sbjct: 470 WVNVVDKNGRKGKRETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGA 529

Query: 359 DHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITL 410
           +H+     Y +    V   +     +         RLY  G+      KMSK  G+ +  
Sbjct: 530 EHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNP 584

Query: 411 RHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
             V+DE G+DS+R + M        +D+D           P               ++  
Sbjct: 585 DDVIDEYGADSLRMYEMFMGPLDASIDWD--------DNGPAST------------KKFL 624

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           D    L  +      IPQE   D ++ +L      Y   ++  T   
Sbjct: 625 DRVWRLFVNDLDLKAIPQERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|298715272|emb|CBJ27921.1| Leucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 859

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 76/227 (33%), Gaps = 41/227 (18%)

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +V + ++  +   K +N +   +I     + G+P PI   ++ +  +G    G      
Sbjct: 435 EAVVSQLESQQHGRKEINYRLRDWIFSRQRYWGEPIPIYFPVEMVDPEGDPRRGDDHKIC 494

Query: 296 SKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKS--------DGSY------------- 331
                  D+    L      S   GDD    L ++        DG +             
Sbjct: 495 YDQPMPVDVSELPLTLPEMESFEPGDDPQGCLTRAPDWRFFQRDGKWFARETNTMPQWAG 554

Query: 332 ------TYFAADLAYFKCKYERGFDNM---IYVMGSDHS----GYVKRLEAVAAAVSE-- 376
                  +     A      +   D M   +YV G +H+     Y +    V   +    
Sbjct: 555 SCWYYLRFTDTKNADAGWSKKADKDWMPVDLYVGGQEHAVLHLLYARFWHKVLHDLGHVK 614

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                  L+ + + L  DG   KMSK  G+ I    +VD  G+D++R
Sbjct: 615 DPEPFQRLVHQGMILGTDGE--KMSKSRGNVINPDDIVDSDGADALR 659


>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 933

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 31/196 (15%)

Query: 343 CKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            + E G+   +Y+ GSD   G+       +     +     VL    V    DG  +KMS
Sbjct: 556 VRKELGWPADMYLEGSDQHRGWFHSSLLESVGTRGRAPYKEVLTHGFVV---DGKGLKMS 612

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ IT   ++D+ G++ +R  +     +E +      +K   +         +Y + 
Sbjct: 613 KSLGNVITPDEIIDKYGAEILRLWVAAEDYTEDVRISNDIIKRLVE---------SYRKI 663

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           R+  R       D + D    N IP E   +  +  L+     +  V +    A E    
Sbjct: 664 RNTMRYLLGNLYDFNPD---ENSIPFEKLKELDKYILM----RWQEVKKRIYKAYE---- 712

Query: 522 AFYLYDLASVFHGHWS 537
             Y       FH  + 
Sbjct: 713 -NY------QFHIFYH 721


>gi|283769685|ref|ZP_06342577.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283459832|gb|EFC06922.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 471

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 114/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 4   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 61

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 62  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 113

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    E  +  +KD   Q           A     D++     F  G        
Sbjct: 114 TSNPRVMDHMEDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGILSHQS 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       D P  +    +    +
Sbjct: 164 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECS 214

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 215 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 266

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 267 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 319


>gi|260574448|ref|ZP_05842452.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259023344|gb|EEW26636.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 907

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   +G+   R    K     +E     P+G +H+GH R   +GD +A   A +G
Sbjct: 11  AKWQAAWEAAGVFTARRDPAKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARQKAAAG 69

Query: 159 YEV 161
           Y V
Sbjct: 70  YSV 72


>gi|291614869|ref|YP_003525026.1| valyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584981|gb|ADE12639.1| valyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 948

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 61/236 (25%), Gaps = 39/236 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +   +G         K     I+    N TG +H+GH     + D L       G
Sbjct: 14  ARWYPTWENAGYFKAGLDGSKKENFCIQLPPPNVTGTLHMGHGFNQTLMDALTRYHRMRG 73

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                +   + AG   QI                                  V +   D 
Sbjct: 74  DNTLWQPGTDHAGIATQI----------------------------------VVERQLDA 99

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     EK++  V ++   +   I +  ++ L    D          G    + + 
Sbjct: 100 QGKSRHELGREKFIEKVWEWKEYSGNTITKQ-MRRLGTSPDWSRERFTMDEGLSRSVTET 158

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              L  +G +Y G               D + +          +  PL  +DGS  
Sbjct: 159 FVRLFNEGLIYRGKRLVNWDPKLHTAVSDLEVVQEEEDGFMYHIQYPL--ADGSGH 212


>gi|225076336|ref|ZP_03719535.1| hypothetical protein NEIFLAOT_01380 [Neisseria flavescens
           NRL30031/H210]
 gi|224952321|gb|EEG33530.1| hypothetical protein NEIFLAOT_01380 [Neisseria flavescens
           NRL30031/H210]
          Length = 945

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 79/270 (29%), Gaps = 45/270 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ +         S   +  ++       +I+    N TG +H+GH     + D L   
Sbjct: 6   SPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRY 65

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               GY        + AG   QI                             V  + +  
Sbjct: 66  YRMKGYNTAWIPGTDHAGIATQI-----------------------------VVERQLAA 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   ++     +   EK+L  V ++   +    I   ++ +    D              
Sbjct: 97  QNVSRH-----DLGREKFLEKVWEWKEVSG-GTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            + ++   L  QG +Y G        +L    S    +   ++  +      + D+    
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEA 210

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           ++ +         D+A      +  + ++I
Sbjct: 211 VIVATTRPETLLGDVAVAVNPEDERYTHLI 240


>gi|330722377|gb|EGH00228.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 652

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 33/238 (13%)

Query: 296 SKTTQKCDMDRKQLLFRST---MVGDDVDRPLLKSD--------GSYTYFAADLAYFKCK 344
            +  Q+ + +     F      ++GD+ D+ +  +D        G   Y        + +
Sbjct: 214 EEVAQRIEKEGMDAWFDLDAKELLGDEADQYIKITDTLDVWFDSGVTHYSV-----LRQR 268

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
               F   +Y+ GSD   G+ +     + A++       VL    V    D    KMSK 
Sbjct: 269 EVLQFPADLYLEGSDQHRGWFQSSLKTSMAINGCAPYKTVLTHGFVV---DANGHKMSKS 325

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ ++ + V +++G+D +R  +         DF                ++ +    R 
Sbjct: 326 KGNVMSPQKVANDLGADILRLWVAAT------DFSGEMSVSDE------ILKRSADSYRR 373

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           I   A+    +L+      +++  E         L    A+    I +A      +++
Sbjct: 374 IRNTARFFLSNLNGFDPATDLVQVEDMLALDRWALDRA-AQLQDEIIDAYDNYHFHQI 430


>gi|322834559|ref|YP_004214586.1| valyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169760|gb|ADW75459.1| valyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 951

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + D + 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPHGDTSKESFAIMIPPPNVTGSLHMGHAFQQTIMDAMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+  ++   I R  ++ L    D          G   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAESGGTITRQ-MRRLGDSVDWERERFTMDEGLSD 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R++   L ++  +Y G          +    D +
Sbjct: 152 AVREVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|317968252|ref|ZP_07969642.1| valyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 915

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 53/193 (27%), Gaps = 34/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +    G  +       G   ++     N TG +H+GH     + DT+       G
Sbjct: 16  ARWQKAWETQGAFHPDPKA-PGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V                                  LP   +  + ++ + ++      
Sbjct: 75  KNVLC--------------------------------LPGTDHASIAVQTILEKQLKADG 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L    ++  Q+    I   L+ L    D          G    + +  +
Sbjct: 103 KRKEDLGREAFLEKAWEWKAQSG-GTIVGQLRRLGYSVDWRRERFTLDAGCSEAVIEAFN 161

Query: 279 NLARQGYVYEGIL 291
            L  QG +Y G  
Sbjct: 162 RLHEQGLIYRGEY 174



 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 79/243 (32%), Gaps = 41/243 (16%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG+
Sbjct: 498 TGFD-IIFFW-------VARMTMMAGAFTGQMPFQDVYIHGLV---RDENNRKMSKSAGN 546

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    +++  G+D++RF ++        D      ++      V   +    +  +  R
Sbjct: 547 GIDPLLLIERYGADALRFALVREVAGAGQDIRLDYDRKSDTSATVEASRNFANKLWNATR 606

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFY 524
            A                     E D + LQL     L+   RV  ++           Y
Sbjct: 607 FALMNLGGETPSSL--------GEPDPAALQLADRWILSRLARVNRDSAERYG-----SY 653

Query: 525 --------LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
                   LY+ A +     +    +         +   L   R         ++   LN
Sbjct: 654 GLGEAAKGLYEFAWNEVCDWYVELIKRRLNPGENPSAEALADQR-----TARQVLAKALN 708

Query: 576 -II 577
            ++
Sbjct: 709 ELL 711


>gi|307284103|ref|ZP_07564273.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306503474|gb|EFM72723.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|315026628|gb|EFT38560.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 478

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|304410152|ref|ZP_07391771.1| valyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302137|ref|ZP_07581895.1| valyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351561|gb|EFM15960.1| valyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914175|gb|EFN44596.1| valyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|283768674|ref|ZP_06341586.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
 gi|283105066|gb|EFC06438.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
          Length = 647

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 114/365 (31%), Gaps = 72/365 (19%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D +A      GY+V  +   ++ G ++   A   
Sbjct: 10  TTAIAYTSGKP----HIGNVYEIVLADAIARYKKMEGYDVRFQTGTDEHGQKVEQKAQE- 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                           +G  P  ++  +   +  ++    + +        ++       
Sbjct: 65  ----------------QGKTPKAFVDEMATIVKKQFDVMNVQYD-----RFIRTTDADHE 103

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG--YVYEGILPPPKSKTT 299
            ++ +   +    Q DI+  E +    +          L  +G   V  G + P K +T 
Sbjct: 104 KQVQKI-FRKFYDQGDIYKGEYEGMYCEEDEAFFTTSQLTEEGCCPVCGGKVKPMKEETY 162

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA----DLAYFKCKYERG----FD- 350
                     L +      D  +P  + +     F      DL+  +  ++ G    FD 
Sbjct: 163 FFRMSKYADRLMKYIEDHPDFIQPESRKNEIVNNFLKPGLQDLSVSRTSFKWGIPVDFDP 222

Query: 351 -NMIYVM---------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYR 393
            ++IYV                  +H    K+   A    + +   + + +   ++ +  
Sbjct: 223 KHVIYVWIDALSNYITGLGYEVDGNHDPLFKKYWPADLHLIGKDIIRFHTIYWPIMLMAL 282

Query: 394 DG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN---SELLD 436
           D                  KMSK  G+ I    +V   G D++R++ L          + 
Sbjct: 283 DLPLPKQVFGHPWLMVGESKMSKSLGNVIYADDMVHVFGVDAMRYIFLHEMPFAQDGHIT 342

Query: 437 FDFCK 441
           +D   
Sbjct: 343 YDLMM 347


>gi|256396396|ref|YP_003117960.1| valyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362622|gb|ACU76119.1| valyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 882

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 73/258 (28%), Gaps = 40/258 (15%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L    V    +  +         I     N TG +HVGH     + D +       G+  
Sbjct: 33  LYERWVKNGYFTADAASDKEPFTIVIPPPNVTGSLHVGHALNQSIQDAIIRRKRMQGF-- 90

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                                    +ALY    D           + + KE   ++    
Sbjct: 91  -------------------------EALYLPGMDHAGIATQNAVERELAKEGLSRH---- 121

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            +   E ++  V D+  +   KI+    + L I  D          G    ++ I   L 
Sbjct: 122 -DLGREAFVRKVWDWKAEYGGKILGQQ-RRLGISVDWSRERFTMDEGLSKAVQTIFKKLY 179

Query: 282 RQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
             G +Y              + +  + D   +     S   GD  D  ++ +  + T   
Sbjct: 180 EDGLIYRAERIINWCPRCLTALSDIEVDHYDEPGELVSIRYGDGEDSIVVATSRAET-ML 238

Query: 336 ADLAYFKCKYERGFDNMI 353
            D A      +  + ++I
Sbjct: 239 GDTAVAVHPDDERYRHLI 256



 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 106/357 (29%), Gaps = 57/357 (15%)

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V+D  VQ   K +     A       +        G   PI            V  G 
Sbjct: 386 DAVRDGRVQIHPKEMEPRYFAWVDNMHDWTISRQLWWGHRIPIW----YGPDGEVVCVGP 441

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK--YERG 348
              P +    + D D     F S +           S   +    ADLA F        G
Sbjct: 442 DEEPPAGAGWQQDSDVLDTWFSSGL--------WPFSTLGWPERTADLAKFYPTSVLHTG 493

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D +I+   +        +     A+  K+    V+L  LV   RD    KMSK  G+ +
Sbjct: 494 YD-IIFFWVAR------MMMFGLYAMDGKQPFDKVVLSGLV---RDQFGKKMSKSKGNGV 543

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                +D+ GSD+VRF +L   N           +                 +  +  R 
Sbjct: 544 DPLEWMDKFGSDAVRFGLLRGANPGSDQAVAEDWIAGARNF---------ATKIWNATRF 594

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
           A      +  +L   + +  E  +          L+    V+       E ++ A    +
Sbjct: 595 AMMNGAYVPAELPSADRLTVEDRW---------ILSRLNEVVAEVDALYEDFQFAK-AME 644

Query: 528 LASVFH-------GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             +++H         +    +      V  ++      R  L      +++  L ++
Sbjct: 645 --ALYHFAWDEVCDWYIELSKLRLPIGVAPDDPDAQTARAVL----GHVLDVMLRLL 695


>gi|150403248|ref|YP_001330542.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|187647747|sp|A6VIW5|SYM_METM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150034278|gb|ABR66391.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 663

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 107/367 (29%), Gaps = 57/367 (15%)

Query: 133 TGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
            GP+H+GH R   +  D     +   G EV      ++ G  I   A       + +  R
Sbjct: 13  NGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAEREGVKPIDIVDR 72

Query: 185 YQQALYNND--------------------------SDLPEGYYPGVYLKHVGKELADKYS 218
           Y  A+  +                           S L E  Y  +Y K + +   +K  
Sbjct: 73  YHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGY--IYEKEIEQFYCEKCD 130

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF--------ISEDDFHRGDP 270
             L +   E   P  +  +     ++    L+   + +           I     +    
Sbjct: 131 MYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKRTTHYFFKL 190

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQ---KCDMDRKQLLFRSTMVGDDVDR-PLLK 326
           S ++D++             +     +  +     D+ R           DD      ++
Sbjct: 191 SAMQDVLKEYIENSPEMPEHVKNMALRWIEELHDWDVSRNIKWGVPIPGCDDQVMYVWIE 250

Query: 327 SDGSYTYFAADLAYF---KCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQIN 382
           +   Y  F   L            G   + + +G D + +       +   +   K    
Sbjct: 251 APIGYVSFTKQLGGIWEDYWLENTGDSKISHFIGKDITVHHAVFWPGILKGIGGYKMPNA 310

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
           V+    + L       KMS      + ++  ++   SD +R+  +     +   DF +  
Sbjct: 311 VVSGGYLTL----ENKKMSTSKNWVVWVKDFIENFSSDYLRYFFMINAPLNRDTDFSWDD 366

Query: 442 VKEQSKE 448
            +++   
Sbjct: 367 FQKRINT 373


>gi|85057292|ref|YP_456208.1| valyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789397|gb|ABC65129.1| valyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 876

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 85/269 (31%), Gaps = 43/269 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                   +    +  NL        +     N TG +H+GH     + D +       G
Sbjct: 11  EHQRYQKWLEKKYFCSNLNTTKKTFTVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQG 70

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           ++V   +        ++   ++   + ++ L             G+  K + KE+  KY+
Sbjct: 71  FDVL--FLPG-----MDHAGIATQNKVKEQLKQE----------GLLNKTLNKEIFLKYA 113

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +      +                 IR   + L +  D    +          ++++  
Sbjct: 114 WQWKEKHAQN----------------IRQQWQVLGLHLDYNFEKFTLDPDLSQTVQEVFI 157

Query: 279 NLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            L +Q  +Y     I   PK+KT     +    + K  L+       D       S+GS+
Sbjct: 158 KLYQQKLIYRDYKIINWDPKTKTALSNVEVNYHETKGKLYYIKYFLVDFTTNSNLSNGSF 217

Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSD 359
                ++A    + E  F D  + V  +D
Sbjct: 218 ASSFLEIAT--TRPETMFADQALMVNPND 244


>gi|313885870|ref|ZP_07819611.1| glutamate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924699|gb|EFR35467.1| glutamate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 510

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 98/283 (34%), Gaps = 30/283 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWR 184
           + +PTGP+H+G  R A+     A     +G  +       D+   +    + +  ++ W 
Sbjct: 7   APSPTGPLHIGGVRTALFNYLFAR---HNGGTMVLRIEDTDSKRFVPGAEDYIIEALRWL 63

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             +      SD       G Y +   +++  +Y  +L+      +      +     ++ 
Sbjct: 64  GIEIDEGIGSD---NQPYGPYRQSERRDIYREYVQQLIEQGAAYY-----AFDTVEELEQ 115

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R ++   +  +D   S     R   S   + +  L   G  Y         +  +  D+
Sbjct: 116 ARQEMPNFS--YD--ASTRSKMRNSLSLPSEEVTRLLESGEEYVVRFKVDPDREVEVDDL 171

Query: 305 DRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
            R +++  ST +    D+ L KS D   TY    LA     +     ++I   G +    
Sbjct: 172 IRGKVVISSTQLD---DKVLYKSADDLPTYH---LANIVDDHLMQITHVIR--GEEWLPS 223

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                 +  +   K +        L+   +     K+SKR GD
Sbjct: 224 APLHVLLYESFGWKDSMPQFAHLSLLLKPQGSG--KLSKRDGD 264


>gi|197335481|ref|YP_002155222.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|254782453|sp|B5FA60|SYI_VIBFM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|197316971|gb|ACH66418.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 952

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 41/328 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            +  + A   +  L      +W+P      ++ M        I R     + I   +   
Sbjct: 430 FISMDQAGLRAKALEEVKSVEWMPEWGQNRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 489

Query: 262 EDDFHRGDPSPIRDIIDNLARQG-----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + H      I  +   +  +G      V    L   +     +  +D   + F S + 
Sbjct: 490 TAELHPDSLELIEKVAKLVEEKGIQAWWDVDAAELMGEEDAANYEKVLDTLDVWFDSGVT 549

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
              V       D    Y   +        ER     +Y+ GSD   G+ +     + A+ 
Sbjct: 550 HFSV------VDSREEYNFPE-------EERTHSADLYLEGSDQHRGWFQSSLISSVAMK 596

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +
Sbjct: 597 GKAPYRQVLTHGFVV---DGNGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTNEV 653

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                ++ ++S +        AY R R+  R       +L       +++P E       
Sbjct: 654 AVS-DEILKRSAD--------AYRRIRNTAR---FFLANLSGFNPATDIVPAEEMVALDR 701

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +    A    +I  +      +++  
Sbjct: 702 WAVGRAFAAQQEII-KSYDEYNLHEVTQ 728


>gi|154354282|gb|ABS76228.1| arginyl tRNA synthetase [Mastigocladus laminosus W1C]
 gi|154354284|gb|ABS76229.1| arginyl tRNA synthetase [Mastigocladus laminosus W25B]
 gi|222692308|gb|ACM67022.1| arginyl tRNA synthetase [Mastigocladus laminosus W155]
 gi|222692310|gb|ACM67023.1| arginyl tRNA synthetase [Mastigocladus laminosus W226]
 gi|222692312|gb|ACM67024.1| arginyl tRNA synthetase [Mastigocladus laminosus W2910]
 gi|222692314|gb|ACM67025.1| arginyl tRNA synthetase [Mastigocladus laminosus W522]
 gi|222692316|gb|ACM67026.1| arginyl tRNA synthetase [Mastigocladus laminosus W524]
 gi|222692318|gb|ACM67027.1| arginyl tRNA synthetase [Mastigocladus laminosus W525]
 gi|222692320|gb|ACM67028.1| arginyl tRNA synthetase [Mastigocladus laminosus W541]
 gi|222692322|gb|ACM67029.1| arginyl tRNA synthetase [Mastigocladus laminosus W539]
 gi|222692324|gb|ACM67030.1| arginyl tRNA synthetase [Mastigocladus laminosus W531]
 gi|222692326|gb|ACM67031.1| arginyl tRNA synthetase [Mastigocladus laminosus W536]
          Length = 130

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVF 82
           +E     +I + + R+       T  A+ L++   +  + IAE I + +  +   V S+ 
Sbjct: 31  IETLANKKIPLSKGRNSNQVFYITGLALQLAKYEKIPAMEIAEAIASHLSANSAGVFSIQ 90

Query: 83  IAGKGFINLYLSPSYLRKILSSIVV 107
           I   G+I+L L+   L   L  +V 
Sbjct: 91  IVPPGWIHLELAHPVLASWLQRLVE 115


>gi|153001634|ref|YP_001367315.1| valyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151366252|gb|ABS09252.1| valyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|314937165|ref|ZP_07844512.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655784|gb|EFS19529.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 103/334 (30%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V       D  +   
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYTV-------DYVSNFT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++ L  +  ++ + Y    Y       +    S+  +    ++ +  +K 
Sbjct: 69  DVDDKLINRSKE-LNESVPEIADRYIKAFYEDVGALNVKRATSNPRVMNHMDEIIDFIKQ 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                       D+     Q D +         D   +   I+   ++    +  L    
Sbjct: 128 LVDDGYAYESNGDVYFRTRQFDGYGKLSH-QSIDDLKVGARIEAGEQKEDALDFTLWKKA 186

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                  +    Q             RP       +    + +AY     E G    I+ 
Sbjct: 187 KPGEISWESPFGQ------------GRP------GWHIECSVMAYH----ELGKTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            E+  D +RF M+       ++++   V      
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNVELVNAAKSG 314


>gi|269940102|emb|CBI48478.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIGNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|300362219|ref|ZP_07058396.1| leucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354838|gb|EFJ70709.1| leucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 804

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 106/330 (32%), Gaps = 55/330 (16%)

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE---- 262
           KH+  +  D   +E       +WL         A  K +   L+  +     +  E    
Sbjct: 374 KHINSDFLDGLDNEEAKKRMIEWLE-----DHDAGQKKVNYKLRDWDFSRQRYWGEPIPV 428

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             +  G  S + +  D L  +      I P    ++     +D   ++  +   G     
Sbjct: 429 IHWEDGTTSLVPE--DELPLRLPHATDIKPSGTPESPLANLIDWVNVIDENGRKGKRETN 486

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVA 371
            +    GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V 
Sbjct: 487 TMPNWAGSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVL 546

Query: 372 AAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMM 426
             +     +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M
Sbjct: 547 YDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                   +D+D           P               ++  D    L  +      IP
Sbjct: 602 FMGPLDASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIP 641

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           QE   D ++ +L      Y   ++  T   
Sbjct: 642 QERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|157803508|ref|YP_001492057.1| glutamyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|229470575|sp|A8EY39|SYE1_RICCK RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|157784771|gb|ABV73272.1| glutamyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 463

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 92/285 (32%), Gaps = 40/285 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I   + +PTG +H+G  R A+     A              + N          L 
Sbjct: 1   MTNVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLR 41

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++   N   +        + L   G+ +     ++L      K L   K Y    
Sbjct: 42  IEDTDKERSTNEAVEAIFSGLKWLGLDWDGEVIFQSKRNDLYKETALKLLQAGKAYYCFT 101

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + I    +        FI   D+   DP+     I  + R        L  P+  +  
Sbjct: 102 SQEEIEKQRQKALENKQYFIFNSDWRDKDPAAYPTDIKPVIR--------LKTPREGSIT 153

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  ++  ++ +    D  LL+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 154 IRDTLQGDVVIENSHID---DMVLLRSDGTATYM---LAVVVDDHDMGITHIIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A       +       + L       K+SKR G
Sbjct: 206 LTNAARQIAIYQACGYAVPSMTH-----IPLIHGADGAKLSKRHG 245


>gi|326389886|ref|ZP_08211450.1| glutamyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994154|gb|EGD52582.1| glutamyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 479

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 123/407 (30%), Gaps = 73/407 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     +G +      ++D   Q             + 
Sbjct: 9   APSPTGSLHIGGARTALFNWLFAR---HNGGKFILR--VDDTDLQ--RSTEESMKGILEG 61

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  EG            +  ++Y        EE        +  +  ++ +R  
Sbjct: 62  LRWLGIDWDEGPI-------YQSQRIEEYRKFANKLLEEGKAYYC--FCTKEELEEMRKQ 112

Query: 249 LKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +               + G   +  ++ I+   RQG      L  P+   T   D+ R 
Sbjct: 113 AEKEGRPP--------MYTGKCRNLTKEQIEEHLRQGRKPVIRLKVPQQGKTVVHDVIRG 164

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F ++   D +   ++KSD   TY   + A     Y+ G  ++I     +H     + 
Sbjct: 165 DVEFDNSTFDDFI---IMKSDNMPTY---NFATVVDDYQMGITHVIR--AEEHLSNTPKQ 216

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG---------------DFITLRH 412
             +  A+  +  Q        V +       K+SKR G                 +    
Sbjct: 217 ILIYEALGVEIPQFAH-----VSMVLAPDRSKLSKRHGATSVQEFRDQGYLPEAIVNYIT 271

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++  +  D      + +   E   F   +V +    NP  Y                   
Sbjct: 272 LLGWMPKDGEEIFDVSKSIKE---FTLERVSK----NPAVYDVQKLTWIN------GHYI 318

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV--IENATIAQE 517
            + D D     VIP           LI    +Y  +  I +A   +E
Sbjct: 319 RNYDLDKLTEAVIPFL-----KAKNLIREDFDYDYIKKIVSAVRERE 360


>gi|289551672|ref|YP_003472576.1| Glutamyl-tRNA synthetase/Glutamyl-tRNA(Gln) synthetase
           [Staphylococcus lugdunensis HKU09-01]
 gi|315659132|ref|ZP_07911997.1| glutamate--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289181203|gb|ADC88448.1| Glutamyl-tRNA synthetase/Glutamyl-tRNA(Gln) synthetase
           [Staphylococcus lugdunensis HKU09-01]
 gi|315495856|gb|EFU84186.1| glutamate--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 485

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 104/302 (34%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +        ++    +   +Q N L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIED----TDSKRNLEDGEASQFNNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
               ++    ++   D  +GY  G Y +    +  +    +LL+  +  K     ++   
Sbjct: 64  ----KWLGLDWDESVDKDKGY--GPYRQSERADFYNPLIQQLLDEDKAYKCYMTEEELEA 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R ++     QH     E                    +G         P++ T
Sbjct: 118 EREAQIARGEMPRYGGQHAHLTEEQR-------------QQFEAEGRQPAIRFRVPQNHT 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
               DM + ++ F S  +GD     ++K DG  TY       F    +  +  +  V+ G
Sbjct: 165 YTFNDMVKGEISFDSNNIGDW---VIVKKDGVPTYN------FAVAVDDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +   +      L  +    K+SKR G  +       ++
Sbjct: 216 DDHVSNTPKQLMIYDAFGWEPPRFAHM-----SLIVNEERKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|260576322|ref|ZP_05844313.1| glutamyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021393|gb|EEW24698.1| glutamyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 470

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 95/297 (31%), Gaps = 49/297 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
             +K  +   + +PTG +H+G  R A+     A                   G  +  + 
Sbjct: 4   PHSKPVVTRFAPSPTGYLHIGGGRTALFNWLFAR---------------GHGGTFLLRIE 48

Query: 179 LSVFWR----YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
            +   R      +A+    + L   +   V  +   ++   + + E+L           K
Sbjct: 49  DTDRERSTPEATEAILRGLTWLGLDWDGKVVSQFDRRDRHAEVAREML-----ARGSAYK 103

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +  Q  ++  R   KA    H        +   DP+   D           Y   +  P
Sbjct: 104 CFCTQEEIETFRASAKAAG--HSTLFH-SPWRDADPASHPDA---------PYVIRMKAP 151

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +   T   D  +  + F +  +    D   L+SDG+ TY    LA     ++ G  ++I 
Sbjct: 152 RGGETVITDAVQGSVTFGNDQLD---DMVCLRSDGTPTYM---LAVVVDDHDMGVTHVIR 205

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             G DH     R   V  A+        + +   + L       K+SKR G      
Sbjct: 206 --GDDHLNNAARQTMVYQAMGWD-----IPVWAHIPLIHGPDGKKLSKRHGAVGVEE 255


>gi|154354348|gb|ABS76261.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5329]
 gi|154354350|gb|ABS76262.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5331]
          Length = 130

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 24  VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVF 82
           +E  +  +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+ 
Sbjct: 31  IESLVDKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSIQ 90

Query: 83  IAGKGFINLYLSPSYLRKILSSIVVS 108
           I   G+I+L L+   L   L  +V  
Sbjct: 91  IVPPGWIHLELAHPVLAGWLQRLVEK 116


>gi|217972437|ref|YP_002357188.1| valyl-tRNA synthetase [Shewanella baltica OS223]
 gi|217497572|gb|ACK45765.1| valyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|83319485|ref|YP_424244.1| valyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|83283371|gb|ABC01303.1| valyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 872

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 34/227 (14%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   +   + K      +    +  N   K  K +I     N TG +H+GH     + D
Sbjct: 5   LNPKYNHILVEKTKYQYWLDKKLFKANPNSKKPKFSIILPPPNVTGKLHIGHAWDTSLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +      +GY+    +        ++   +S   + +Q L     D  +          
Sbjct: 65  AIIRFKKLTGYD--TLFLPG-----MDHSGISTQVKVEQKLKKQGID--KNKLGREKFLL 115

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              +  ++Y+S                        IIR+    L +  D    +      
Sbjct: 116 EAWKWKEEYAS------------------------IIREQWAKLGLSLDYSTEKFTLDED 151

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
               +++I         +Y+           QK  +   +++++ T 
Sbjct: 152 INQIVKEIFVKFYNDKIIYKDKQIVNWD-PEQKTAISNVEVIYKETQ 197


>gi|116496032|ref|YP_807766.1| methyonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116106182|gb|ABJ71324.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 660

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                   +    +  L  
Sbjct: 16  PSGKLHIGNAYTTIAADVLARYKRLMGYDVF-----------------FLTGTDEHGLKI 58

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  ++L    +K++       V+A+  I+   +K 
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLW--KMLEITNDKFIRTTDKEHVEAVQTIVERLIKQ 116

Query: 252 ----LNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L      +  ED+ +  +   S +    D     G    G       + +    M 
Sbjct: 117 GDVYLGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMS 176

Query: 306 RK--QLLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIY 354
           +   +LL       D V     K++    +      DLA  +  +  G        +++Y
Sbjct: 177 KYTDRLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVY 236

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                +DH+ + K   A    + ++  + +++   ++ +         
Sbjct: 237 VWVDALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKK 296

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 297 IYAHGWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMR 338


>gi|304391812|ref|ZP_07373754.1| glutamyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296041|gb|EFL90399.1| glutamyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 458

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 89/292 (30%), Gaps = 58/292 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-----------GAQINTL 177
           + +PTG +HVG+ R A+     A  +   G  V R    +D            G + + L
Sbjct: 12  APSPTGRLHVGNIRTALFNKLFA--LKHGGNFVLRM---DDTDTERSTSEFAKGIEEDLL 66

Query: 178 ALSVFW--RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L V W    +Q+      D          L +   E AD+              P+   
Sbjct: 67  WLGVTWDRMERQSDRTELYDAAASKLREAGLLYACYETADELDRRRKRQMARGLPPVYDR 126

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDF--HRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +    +K+  ++  A   +            H GDP   +               +  P
Sbjct: 127 AA----LKLTDEERAAFEAEGRTAHWRFLLPNHSGDPFETKRT------------EVHFP 170

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
              +  Q  D+                D  L++ DG+Y Y    +       + G  ++I
Sbjct: 171 DLMRGDQTVDL------------ASMSDPVLVRGDGTYLYTLPSV---VDDLDMGVTHVI 215

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              G+DH        AV  A+                L +D     +SKR G
Sbjct: 216 R--GADHIANTGVQIAVMEALGGNAPTFGHH-----NLLQDASGEGLSKRKG 260


>gi|253731134|ref|ZP_04865299.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725099|gb|EES93828.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|220932862|ref|YP_002509770.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219994172|gb|ACL70775.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 653

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 104/323 (32%), Gaps = 35/323 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  DTLA       Y+       ++ G +I   A     +  + +  
Sbjct: 15  PSDRLHIGHAYTTVAADTLAKFKEMQDYDTMFLTGSDEHGQKIERKASEAGKKPGEYVDE 74

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMK 243
             +   +     G     +++    +             E+  +   K    Y       
Sbjct: 75  IVATFKDLWKRLGVDYDYFIRTTNPDHEKVVQEIFKKIYEKGDIYKGKYEGWYCTPCETF 134

Query: 244 IIRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                L+   +  D      ++ E+ +          +++++ +     +      +   
Sbjct: 135 WTERQLEGEKVCPDCGRPVEWVEEESYFFKLSKYADRLLEHIKKHPEFIQPESRRKEMIN 194

Query: 299 TQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM- 352
             +  ++   +   +   G     DD     +  D    Y +A + Y     ++ F++  
Sbjct: 195 FIESGLEDLSVSRTTFDWGIPVPIDDDHVIYVWFDALSNYISA-IGYLSD--DKKFNHYW 251

Query: 353 ---IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              ++++G D    + R   +      ++        +      L   G   KMSK  G+
Sbjct: 252 PADVHIVGKD----ILRFHTIIWPIILMALDLPLPKKVFGHGWLLTETG---KMSKSKGN 304

Query: 407 FITLRHVVDEVGSDSVRFMMLWR 429
            +    ++D+ G D +R+ +L  
Sbjct: 305 VVDPNKLIDDFGVDPIRYYLLRE 327


>gi|154354294|gb|ABS76234.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5337]
          Length = 130

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KIETLANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVS 108
            I   G+I+L L+   L   L  +V  
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVEK 116


>gi|108563517|ref|YP_627833.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837290|gb|ABF85159.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 874

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 102/324 (31%), Gaps = 48/324 (14%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  KG +  +     N TG +H+GH     + D LA      GY+   +  ++ 
Sbjct: 31  IDGNEKIQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDH 90

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D                  E  +K    +L+  +   
Sbjct: 91  AG--IATQNVVEKQLLNQGIKKED-------LGREEFIQKVWEWKEKSGGAILDQMKRLG 141

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 142 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDGALSDIEVEYEERK 201

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGS 330
           G +Y         K        R + LF  + +             G  V  PL+     
Sbjct: 202 GALYYIRYYLENQKDYLVVATTRPETLFGDSALMINPNDERYKHLVGQKVILPLIN---R 258

Query: 331 YTYFAADL------AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
                AD+           K   G D   Y +G  H             + ++K  +N  
Sbjct: 259 AIPIIADVHVEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EMIKIFDEKGILNAH 311

Query: 385 LCELVRL----YRDGMPIKMSKRA 404
             E   L     RD +  K+ + A
Sbjct: 312 CGEFENLERLEARDKVVEKLKENA 335


>gi|120598093|ref|YP_962667.1| valyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146293836|ref|YP_001184260.1| valyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|120558186|gb|ABM24113.1| valyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565526|gb|ABP76461.1| valyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 57/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L     +   +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEAQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|296313398|ref|ZP_06863339.1| valine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840109|gb|EFH24047.1| valine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 945

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 79/270 (29%), Gaps = 45/270 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ +         S   +  ++       +I+    N TG +H+GH     + D L   
Sbjct: 6   SPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRY 65

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               GY        + AG   QI                             V  + +  
Sbjct: 66  YRMKGYNTAWIPGTDHAGIATQI-----------------------------VVERQLAA 96

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   ++     +   EK+L  V ++   +    I   ++ +    D              
Sbjct: 97  QNVSRH-----DLGREKFLEKVWEWKEVSG-GTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            + ++   L  QG +Y G        +L    S    +   ++  +      + D+    
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEA 210

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           ++ +         D+A      +  + ++I
Sbjct: 211 VIVATTRPETLLGDVAVAVNPEDERYTHLI 240


>gi|288930998|ref|YP_003435058.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288893246|gb|ADC64783.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 467

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/321 (17%), Positives = 103/321 (32%), Gaps = 35/321 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  DTL   + F G++V                       + Q   + D  +
Sbjct: 34  HIGHGRNIVFFDTLRRFLEFKGHKVI----------------------FVQNFTDVDDKI 71

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                  + L    KE+A+ + SE     E           V   +  I + +KAL  + 
Sbjct: 72  ---IRRAIELGKTAKEVAEFFISEFWKDAEALNYKKGLHPKVTDYIPKIIEFVKALIEKG 128

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             +  E  + +     +          GY  E +         +K D+    L  +S   
Sbjct: 129 YAYEVESKYGKDVYFHVPRFEKYGELSGYSVEELNRHRIEPDERKKDVKDFALW-KSAKE 187

Query: 317 GDDVDRPLLKSD---GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
            D   + +  S    G   +               FD    + G               A
Sbjct: 188 EDFKAKSVYDSPWGKGRPGWHIECSVMSSELLGVPFD----IHGGGMDLIFPH-HENERA 242

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            S     +  +   +   +      KMSK  G+ + +R  V++ G + +RF +L      
Sbjct: 243 QSYALFGVEPVRYWVHNNFVTINGEKMSKSLGNIVRIRDAVNKYGGEVLRFFLLLAHYRS 302

Query: 434 LLDFDFCKVKEQSKENPVFYV 454
            LD+   K  E++K++  + +
Sbjct: 303 PLDYS-EKALERAKKSYEYLL 322


>gi|269925198|ref|YP_003321821.1| glutamyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788858|gb|ACZ40999.1| glutamyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 492

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 67/410 (16%), Positives = 126/410 (30%), Gaps = 70/410 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            +PTG +HVG+ R AV    LA      G +        D    +      ++   +   
Sbjct: 11  PSPTGYLHVGNLRTAVFNWLLAR---HHGGKFILRIEDTDRARVVPGAVEVIYETLRWIG 67

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            + D     G     Y++   KE+  +Y+  L++  +  +        ++A+ +  R   
Sbjct: 68  IDWDEGPDIGGPHAPYVQSERKEIYREYAELLISQGK-AYRCFCSQERLEALREEQRK-- 124

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             L  ++D        + G           L   G  Y      P   TT   D+ R  +
Sbjct: 125 NNLPTRYDRKCR----YLGPEEA-----KRLVDSGQPYVVRFATPLEGTTTMVDLLRGPV 175

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV---KR 366
            +++  + D     +LKSDG   Y     A     +  G  +++         Y+    R
Sbjct: 176 TYQNDQIDDF---VILKSDGYPPYHF---AVVVDDHLMGITHVL-----RGDEYISSGAR 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS----- 421
              +  A+          L     +       ++SKR G    L +    +  ++     
Sbjct: 225 DILLHEALGWNPP-----LYAHTAIILGPDRSRLSKRHGALPALEYRDIGIIPEAMFNYL 279

Query: 422 -------------------VRFMMLWRKNSELLDFDFCKV--KEQSKENPVFYVQYAYAR 460
                              +    + + +     FD  K+        N V  V    +R
Sbjct: 280 ALLGASYSADREIFSREELIELFDIDKMSPSPAIFDANKLEWMNAYYINHVLSVDDLASR 339

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            + I   A  +  +   + +   VI    +        I  L   P V+E
Sbjct: 340 VKPILENAGLVKTEDLDEGYLIEVIGLVKDR-------IKLL---PDVVE 379


>gi|225026669|ref|ZP_03715861.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
 gi|224956039|gb|EEG37248.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
          Length = 654

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 117/388 (30%), Gaps = 57/388 (14%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  I    A  +G  H+G+    V+ D +A      GY+V  +   ++ G +I   
Sbjct: 1   MSKKPYYITTAIAYTSGKPHIGNTYEIVLADAIARFKRKEGYDVRFQTGTDEHGQKIELK 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           A       ++ + N   ++         +  +     DK+        E++   I K   
Sbjct: 61  AAEAGISPKEFVDNTAGEIK-------RIWDLMNTSYDKFIRTTDEDHEKQVQKIFKKLY 113

Query: 238 VQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            +    I +   + +     + F +E     G              + Y +        +
Sbjct: 114 DKG--DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGRPCQPAKEEAYFFR---MSKYA 168

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD-- 350
               +   D    +   +   + ++  LL           DL   +  +  G    FD  
Sbjct: 169 DRLIQYINDNPDFIQPESRKNEMMNNFLL-------PGLQDLCVSRTSFSWGIPVDFDPK 221

Query: 351 NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           +++YV                 G     + K   A    + +   + + +   +  +  D
Sbjct: 222 HVVYVWLDALTNYITGLGYDCDGESGELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALD 281

Query: 395 --------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                   G P       KMSK  G+ I    +VD  G D+VR+ +L            +
Sbjct: 282 LPLPKQVFGHPWLLQGDGKMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVITW 341

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQ 467
             + E+   +    +     R  S+  +
Sbjct: 342 DLLVERMNSDLANTLGNLVNRTISMSNK 369


>gi|154354276|gb|ABS76225.1| arginyl tRNA synthetase [Mastigocladus laminosus B6A]
 gi|154354278|gb|ABS76226.1| arginyl tRNA synthetase [Mastigocladus laminosus W16C]
 gi|154354280|gb|ABS76227.1| arginyl tRNA synthetase [Mastigocladus laminosus W17B]
 gi|154354286|gb|ABS76230.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5207]
 gi|154354288|gb|ABS76231.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5208]
 gi|154354290|gb|ABS76232.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5327]
 gi|154354292|gb|ABS76233.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5328]
 gi|222692204|gb|ACM66970.1| arginyl tRNA synthetase [Mastigocladus laminosus W113]
 gi|222692206|gb|ACM66971.1| arginyl tRNA synthetase [Mastigocladus laminosus W118]
 gi|222692208|gb|ACM66972.1| arginyl tRNA synthetase [Mastigocladus laminosus W172]
 gi|222692210|gb|ACM66973.1| arginyl tRNA synthetase [Mastigocladus laminosus W1710]
 gi|222692212|gb|ACM66974.1| arginyl tRNA synthetase [Mastigocladus laminosus W1107]
 gi|222692214|gb|ACM66975.1| arginyl tRNA synthetase [Mastigocladus laminosus W213]
 gi|222692216|gb|ACM66976.1| arginyl tRNA synthetase [Mastigocladus laminosus W262]
 gi|222692218|gb|ACM66977.1| arginyl tRNA synthetase [Mastigocladus laminosus W266]
 gi|222692220|gb|ACM66978.1| arginyl tRNA synthetase [Mastigocladus laminosus W277]
 gi|222692222|gb|ACM66979.1| arginyl tRNA synthetase [Mastigocladus laminosus W281]
 gi|222692224|gb|ACM66980.1| arginyl tRNA synthetase [Mastigocladus laminosus W293]
 gi|222692226|gb|ACM66981.1| arginyl tRNA synthetase [Mastigocladus laminosus W311]
 gi|222692228|gb|ACM66982.1| arginyl tRNA synthetase [Mastigocladus laminosus W321]
 gi|222692230|gb|ACM66983.1| arginyl tRNA synthetase [Mastigocladus laminosus W325]
 gi|222692232|gb|ACM66984.1| arginyl tRNA synthetase [Mastigocladus laminosus W326]
 gi|222692234|gb|ACM66985.1| arginyl tRNA synthetase [Mastigocladus laminosus W327]
 gi|222692236|gb|ACM66986.1| arginyl tRNA synthetase [Mastigocladus laminosus W411]
 gi|222692238|gb|ACM66987.1| arginyl tRNA synthetase [Mastigocladus laminosus W412]
 gi|222692240|gb|ACM66988.1| arginyl tRNA synthetase [Mastigocladus laminosus W413]
 gi|222692242|gb|ACM66989.1| arginyl tRNA synthetase [Mastigocladus laminosus W414]
 gi|222692244|gb|ACM66990.1| arginyl tRNA synthetase [Mastigocladus laminosus W417]
 gi|222692246|gb|ACM66991.1| arginyl tRNA synthetase [Mastigocladus laminosus W528]
 gi|222692248|gb|ACM66992.1| arginyl tRNA synthetase [Mastigocladus laminosus W552]
 gi|222692250|gb|ACM66993.1| arginyl tRNA synthetase [Mastigocladus laminosus W554]
 gi|222692252|gb|ACM66994.1| arginyl tRNA synthetase [Mastigocladus laminosus W555]
 gi|222692254|gb|ACM66995.1| arginyl tRNA synthetase [Mastigocladus laminosus W556]
 gi|222692256|gb|ACM66996.1| arginyl tRNA synthetase [Mastigocladus laminosus W558]
 gi|222692258|gb|ACM66997.1| arginyl tRNA synthetase [Mastigocladus laminosus W111]
 gi|222692260|gb|ACM66998.1| arginyl tRNA synthetase [Mastigocladus laminosus W112]
 gi|222692262|gb|ACM66999.1| arginyl tRNA synthetase [Mastigocladus laminosus W114]
 gi|222692264|gb|ACM67000.1| arginyl tRNA synthetase [Mastigocladus laminosus W116]
 gi|222692266|gb|ACM67001.1| arginyl tRNA synthetase [Mastigocladus laminosus W119]
 gi|222692268|gb|ACM67002.1| arginyl tRNA synthetase [Mastigocladus laminosus W157]
 gi|222692270|gb|ACM67003.1| arginyl tRNA synthetase [Mastigocladus laminosus W218]
 gi|222692272|gb|ACM67004.1| arginyl tRNA synthetase [Mastigocladus laminosus W2110]
 gi|222692274|gb|ACM67005.1| arginyl tRNA synthetase [Mastigocladus laminosus W245]
 gi|222692276|gb|ACM67006.1| arginyl tRNA synthetase [Mastigocladus laminosus W246]
 gi|222692278|gb|ACM67007.1| arginyl tRNA synthetase [Mastigocladus laminosus W247]
 gi|222692280|gb|ACM67008.1| arginyl tRNA synthetase [Mastigocladus laminosus W249]
 gi|222692282|gb|ACM67009.1| arginyl tRNA synthetase [Mastigocladus laminosus W313]
 gi|222692284|gb|ACM67010.1| arginyl tRNA synthetase [Mastigocladus laminosus W511]
 gi|222692286|gb|ACM67011.1| arginyl tRNA synthetase [Mastigocladus laminosus W559]
 gi|222692288|gb|ACM67012.1| arginyl tRNA synthetase [Mastigocladus laminosus W518]
 gi|222692290|gb|ACM67013.1| arginyl tRNA synthetase [Mastigocladus laminosus W447]
 gi|222692292|gb|ACM67014.1| arginyl tRNA synthetase [Mastigocladus laminosus W352]
 gi|222692294|gb|ACM67015.1| arginyl tRNA synthetase [Mastigocladus laminosus W323]
 gi|222692296|gb|ACM67016.1| arginyl tRNA synthetase [Mastigocladus laminosus W318]
 gi|222692298|gb|ACM67017.1| arginyl tRNA synthetase [Mastigocladus laminosus W322]
 gi|222692300|gb|ACM67018.1| arginyl tRNA synthetase [Mastigocladus laminosus W438]
 gi|222692302|gb|ACM67019.1| arginyl tRNA synthetase [Mastigocladus laminosus W328]
 gi|222692304|gb|ACM67020.1| arginyl tRNA synthetase [Mastigocladus laminosus W5210]
 gi|222692306|gb|ACM67021.1| arginyl tRNA synthetase [Mastigocladus laminosus W553]
 gi|222692338|gb|ACM67037.1| arginyl tRNA synthetase [Mastigocladus laminosus W442]
 gi|222692340|gb|ACM67038.1| arginyl tRNA synthetase [Mastigocladus laminosus W459]
 gi|222692342|gb|ACM67039.1| arginyl tRNA synthetase [Mastigocladus laminosus W457]
          Length = 130

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KIETLANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVE 115


>gi|17987270|ref|NP_539904.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17982947|gb|AAL52168.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 544

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 112/363 (30%), Gaps = 32/363 (8%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N +        +L +      + G   I    K  I    A P G  H+GH    +  D 
Sbjct: 6   NFF--SRAYHALLRARASKNRKTG--SIMSREKYYITTAIAYPNGKPHIGHAYELIATDA 61

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLAL--------------SVFWRYQQALYNNDSD 195
           +A     +G +V      ++ G ++   A               S F R  + L +++ D
Sbjct: 62  MARFQRLNGMDVYFLTGTDEHGIKMLQSARKEGITPRELADRNTSAFRRMAEVLNSSNDD 121

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                    Y        A   + ++       W  +  +         +R D      Q
Sbjct: 122 YIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWYSVRDEAYYGEEETEVRADGVRYGPQ 181

Query: 256 HD--IFISEDDFHRGDPSPIRDIIDNLARQ-GYVY----EGILPPPKSKTTQKCDMDRKQ 308
                ++ E+ +     +    ++D      G++        +        +   + R  
Sbjct: 182 GTPVEWVEEESYFFRLSAYQDKLLDLYENNPGFIMPAERRNEIVSFVKSGLKDLSISRTT 241

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--MIYVMGSDHSGYVKR 366
             +   + GD+     +  D    Y  A L Y     ER        +++G D    + R
Sbjct: 242 FDWGIPVPGDEKHVMYVWVDALTNYITA-LGYPDTTDERWAYWPANAHIIGKD----ISR 296

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             AV        AQ+ +        +      KMSK  G+ I    +V+  G D +R+ +
Sbjct: 297 FHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYFL 356

Query: 427 LWR 429
           +  
Sbjct: 357 MRE 359


>gi|331701956|ref|YP_004398915.1| methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129299|gb|AEB73852.1| Methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 675

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 110/342 (32%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      GY+V      ++ G +I   A  +          
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFKRAMGYDVFFLTGTDEHGLKIEQKAEQL---------- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +   +   +    L     K++    DY  +A+  I +  L  
Sbjct: 67  -------GMSPKDYVDQMAASIKQLWKK--LEISNTKFIRTTDDYHEKAVADIFQKLLDN 117

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S  D      S + ++  +   +   G    G       + +    M 
Sbjct: 118 GDIYLGEYTGWYSVSDEEYFTESQLAEVYRDKNGKVTGGKAPSGHEVQLVHEQSYFFKMS 177

Query: 306 RKQLL-FRSTMVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMIY 354
           +      R      +  +P  + +     F      DLA  +  +  G        +++Y
Sbjct: 178 KYADWLLRYYKDNPNFIQPATRMNEMIKNFIEPGLEDLAVSRTTFTWGVPVKSDPKHVVY 237

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V               G D S + K   A    V ++  + + +   ++           
Sbjct: 238 VWIDALTNYITALGYDGKDDSNFKKYWPANVQMVGKEIVRFHTIYWPIILHALGLPLPKT 297

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +VD  G D++R+ +L 
Sbjct: 298 VYGHGWLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLLR 339


>gi|327401695|ref|YP_004342534.1| leucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317203|gb|AEA47819.1| leucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 940

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 92/291 (31%), Gaps = 35/291 (12%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N        +K       SGI            + I +   N  G +H GH R   +GD
Sbjct: 4   VNFR---EIEKKWQKKWEESGIFNAEPDSRPKFFLTIPYPYLN--GNLHAGHTRTFTIGD 58

Query: 149 TLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEG----- 199
            +A      GY V     +++   G  I  LA  +  + ++   +Y    D+P       
Sbjct: 59  AVARYKRMLGYNVLYPLGFHV--TGTPIIGLAELIAKKDERTIKVYTEYHDVPLDVLLTL 116

Query: 200 --------YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
                   Y+    LK +                +E++   ++    +   K  +++   
Sbjct: 117 KTPEKIVEYFSQEALKALKSIGYSIDWRRCFTTTDEEYQRFIEWQYWKLKDKGLVVKGTH 176

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                 HD    ED  H         I+D    + Y+ E  +  P +    +       +
Sbjct: 177 PVRYCPHDANPVED--HDLLMGENATIVDFTVIKFYLDEEGIVFPCATLRPETVFGVTNI 234

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             + T         L + +G  T+F +  AY K  Y      +I  + +  
Sbjct: 235 WLKPTTY------VLARVNGE-TWFVSKEAYEKLTYTEKQVELIKEVDAKQ 278


>gi|322387075|ref|ZP_08060686.1| glutamate--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321142062|gb|EFX37556.1| glutamate--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 486

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++      +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSQEEK------AAYIAEREAAGIIPTVRLVVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGNIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|160902902|ref|YP_001568483.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083631|sp|A9BIJ7|SYV_PETMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|160360546|gb|ABX32160.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 874

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 58/195 (29%), Gaps = 36/195 (18%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L      +      +          + I     N TG +H+GH    V+ D         
Sbjct: 12  LENKWYKLWEENHSFEPKPGNGKFSIVI--PPPNITGRIHIGHALNIVLQD--------- 60

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADK 216
                                  +  RY +        +P E +        V K L  +
Sbjct: 61  -----------------------ISVRYNRMKGKETVWIPGEDHAGIATQHVVEKYLLKE 97

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 ++  E++L I  D++       IR+ +KAL    D          G    +R +
Sbjct: 98  EGKRREDYTREEFLKITWDWA-NKYRNHIREQIKALAASVDWSRERFTLDEGLNQAVRKV 156

Query: 277 IDNLARQGYVYEGIL 291
             +L  +G +Y+G  
Sbjct: 157 FVSLYNEGLIYKGKY 171



 Score = 38.4 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 11/87 (12%)

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       GFD +I+         V R+  +      +K   +V L +LV   RD    K
Sbjct: 474 YPTDLLVTGFD-IIFFW-------VARMIMMGEKFMGEKPFHDVYLHQLV---RDKYGRK 522

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMM 426
           MSK  G+ +    V++E G+D VRF +
Sbjct: 523 MSKSLGNGVDPLEVINEYGTDPVRFTL 549


>gi|126175313|ref|YP_001051462.1| valyl-tRNA synthetase [Shewanella baltica OS155]
 gi|125998518|gb|ABN62593.1| valyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 958

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|116333117|ref|YP_794644.1| methyonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098464|gb|ABJ63613.1| methionyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 677

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 108/345 (31%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  DT+A     +GY+V                   +    +  L  
Sbjct: 16  PSGRLHIGNSYTTIACDTVARYKRSNGYDVF-----------------FLTGTDEHGLKI 58

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            D    +   P  Y+  +   +   +  + L    +K++       V A+  I    LK 
Sbjct: 59  EDKAKAQNQTPQEYVDGMATGIKQLW--KTLEISNDKFIRTTDHEHVAAVQAIFDRLLKQ 116

Query: 252 LNI---QHDIFISEDD---FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +I   +++ + SEDD   F     + +    D     G    G       + +    M 
Sbjct: 117 GDIYLGEYEGWYSEDDEEYFTETQLAKVYRDADGKMIGGQAPSGHDVSLVKEQSYFFKMS 176

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDNMIY 354
           +                    R     +        DLA  +  +  G        +++Y
Sbjct: 177 KYADWLLDFYHSHPHFIQPESRMTEMINNFIKPGLEDLAVSRTTFSWGVPVKSDPKHVVY 236

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV----------- 389
           V                 D   + K   A    V ++  + + +   +V           
Sbjct: 237 VWIDALLNYITALGYTSDDDGLFKKFWPADVQMVGKEIVRFHSIYWPIVLHALGLEMPKE 296

Query: 390 ------RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                  L +DG   KMSK  G+ I    +VD  G D++R+ ++ 
Sbjct: 297 LFAHGWLLMKDG---KMSKSKGNVIYPETLVDRYGLDALRYYLMR 338


>gi|59711074|ref|YP_203850.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354555|sp|Q5E7N4|SYI_VIBF1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59479175|gb|AAW84962.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 952

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 41/328 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            +  + A   +  L      +W+P      ++ M        I R     + I   +   
Sbjct: 430 FISMDQAGLRAKALEEVKSVEWMPEWGQNRIEGMIEGRPEWCISRQRTWGVPIALFVHKE 489

Query: 262 EDDFHRGDPSPIRDIIDNLARQG-----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             + H      I  +   +  +G      V    L   +     +  +D   + F S + 
Sbjct: 490 TAELHPDSLELIEKVAKLVEEKGIQAWWDVDAAELMGEEDAANYEKVLDTLDVWFDSGVT 549

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
              V       D    Y   +        ER     +Y+ GSD   G+ +     + A+ 
Sbjct: 550 HFSV------VDSREEYNFPE-------EERTHSADLYLEGSDQHRGWFQSSLISSVAMK 596

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    DG   KMSK  G+ +  + V +++G+D +R  +     +  +
Sbjct: 597 GKAPYRQVLTHGFVV---DGNGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTNEV 653

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                ++ ++S +        AY R R+  R       +L       +++P E       
Sbjct: 654 AVS-DEILKRSAD--------AYRRIRNTAR---FFLANLSGFNPATDIVPAEEMVALDR 701

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +    A    +I  +      +++  
Sbjct: 702 WAVGRAFAAQQEII-KSYDEYNLHEVTQ 728


>gi|325957385|ref|YP_004292797.1| leucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333950|gb|ADZ07858.1| leucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 804

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 113/347 (32%), Gaps = 60/347 (17%)

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++A   +   +   +  G+ ++   K++ D       N  E+K    ++D          
Sbjct: 366 KEAFTEDGPHINSEFLNGLNIEDAKKKMVDWLEDH--NCGEKKVNYKLRD------WDFS 417

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R           +   ED    G+ + + +  D L  +      I P    ++      D
Sbjct: 418 RQRY--WGEPIPVIHWED----GETTLVPE--DQLPLRLPHATDIKPSGTPESPLANLTD 469

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGS 358
              ++ ++   G      +    GS  Y+   +     K    +D +       +Y+ G+
Sbjct: 470 WVNVVDKNGRKGKRETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGA 529

Query: 359 DHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITL 410
           +H+     Y +    V   +     +         RLY  G+      KMSK  G+ +  
Sbjct: 530 EHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNP 584

Query: 411 RHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
             V+DE G+DS+R + M        +D+D           P               ++  
Sbjct: 585 DDVIDEYGADSLRMYEMFMGPLDASIDWD--------DNGPAST------------KKFL 624

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           D    L  +      IPQE   D ++ +L      Y   ++  T   
Sbjct: 625 DRVWRLFVNDLDLKAIPQERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|158335764|ref|YP_001516936.1| valyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306005|gb|ABW27622.1| valyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 1123

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 62/214 (28%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+           +   +  +    G    I     N TG +H+GH   A + D L   
Sbjct: 13  DPAATEAKWQETWEANNVFKADPNHTGDPYCIVIPPPNVTGSLHMGHAFEAALIDVL--- 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY + + +N   LP   +  + +  + ++ 
Sbjct: 70  -----------------------------IRYHRMIGDNTLWLPGTDHASIAVHTILEKQ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   +++L   K +  ++  KI+    + L +  D          G    +
Sbjct: 101 LQAEGKTRYDIGRDEFLERAKRWKAESGGKIVHQQ-RRLGVSVDWTRERFTMDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 +  +G +Y G         +Q    D++
Sbjct: 160 NKAFVQMHEEGLIYRGNYMVNWCPASQSAVSDQE 193



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 26/210 (12%)

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
            F  E+W  + +D+ V      I   L     +   + I  +E +     P  + +  ++
Sbjct: 386 EFIPERWTKVYRDWLVNLRDWCISRQLWWGHQIPAWYAISETEGEIREDTPFVVAENAES 445

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
             ++     G                   L   ST+   +       +D S  Y  A L 
Sbjct: 446 AQQKAVEQFGPDVQLLQDPDVLDTWFSSGLWPFSTLGWPEET-----ADLSTYYPTATLV 500

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                   GFD +I+         V R+  +A   + +    +V +  LV   RD    K
Sbjct: 501 T-------GFD-IIFFW-------VARMTLMAGHFTGEMPFKDVYIHGLV---RDENNKK 542

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           MSK + + I    ++D+ G+D++R+ ++  
Sbjct: 543 MSKSSNNGIDPLILIDKYGTDALRYTLIRE 572


>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 458

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 119/369 (32%), Gaps = 61/369 (16%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
                    +H+G+ R     D +   + + GY   R +Y+                  +
Sbjct: 1   MCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGY---RVHYV------------------R 39

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKI 244
                +D  +   +  G     +       +  +   L+  E    P V ++ +  +++I
Sbjct: 40  NYTDVDDKIIKAAHETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEH-LPEILRI 98

Query: 245 IRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           I + L A  + +    D++ S   +        +  +D+L        G    P  +  +
Sbjct: 99  I-ETLVAKGVAYESQGDVYFSVSSYPEY-AKLSKRKLDDL------CAGERVQPGEQKRE 150

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD---NMIYVMG 357
             D     L   +       D P  K  G   +     A         FD     + ++ 
Sbjct: 151 PLDF---ALWKAAKPGEPSWDSPWGK--GRPGWHIECSAMSAKYLGESFDIHGGALDLIF 205

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
             H   + + EA +    +  A+  +    L     D    KMSK  G+ + LR  +  V
Sbjct: 206 PHHENEIAQSEAAS---GKPFAKYWMHCGFL-----DIEGAKMSKSLGNVVRLRDALTRV 257

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
            ++++RF  L       L F   K    S+    + ++Y Y       R+  +     DF
Sbjct: 258 DAEALRFFFLSTHYRHPLHFS-DKAIADSE----YRLEYFYET----LRKVDERVGGKDF 308

Query: 478 DLFPRNVIP 486
              P +  P
Sbjct: 309 GQGPLHGEP 317


>gi|56750945|ref|YP_171646.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81299398|ref|YP_399606.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820674|sp|Q5N3J4|SYV_SYNP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56685904|dbj|BAD79126.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168279|gb|ABB56619.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 909

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 117/381 (30%), Gaps = 57/381 (14%)

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           + L      E   F  E+W  + +D+        I   L     Q   + +  + +    
Sbjct: 374 RALEALNGEEGPRFVPERWTKVYRDWLENLRDWCISRQLW-WGHQIPAWYAVSETNGVVT 432

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                ++   A +    +  +         + D D     F S +           S   
Sbjct: 433 DSTPFVVAKSAEE--AQQQAIAQFGPDVVLQQDEDVLDTWFSSGL--------WPFSTLG 482

Query: 331 YTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +     DL  F        GFD +I+         V R+  +A   + K    +V +  L
Sbjct: 483 WPNQTEDLETFYPTSTLVTGFD-IIFFW-------VARMTMMAGHFTGKMPFKDVYIHGL 534

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V   RD    KMSK AG+ I    ++D  G+D++R+ ++        D      ++  + 
Sbjct: 535 V---RDENNKKMSKSAGNGIDPLILIDRYGTDALRYALIREVVGAGQDIRLDYNRKTDES 591

Query: 449 NPVFYVQYAYARCRSIFR----QAKDIFPD-------LDFDLFPRNVIPQESEFDTSELQ 497
             V   +    +  +  R       D  P+        D +L  R ++ +          
Sbjct: 592 ATVETSRNFANKVWNASRFVMLNLDDKTPEQLGMAATADLELADRWILSRYHATTE---A 648

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLT 556
           LI  +  Y   +  A            LY+ +   F   +           +   +    
Sbjct: 649 LINQIEAYD--LGAAAKQ---------LYEFIWGDFCDWY----IELVKPRLYGED---A 690

Query: 557 MMRLQLVHAVASIINSGLNII 577
             RL     +A I+   L ++
Sbjct: 691 QSRLVAQQTLAQILEGILRLL 711



 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+        +      +  N         I     N TG +H+GH   A +       
Sbjct: 13  SPAATEVRWQKLWEETSAFQANSQSSAEPYCIVIPPPNVTGSLHMGHAFEASL------- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                               I+ L      R + AL+   +D        +  + + +E 
Sbjct: 66  --------------------IDVLIRFQRMRGKNALWLPGTDHASIAVQTILDRQLREEG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y      F E  W    +          I   L+ L +  D          G    +
Sbjct: 106 LSRYDLGREKFLERAWQWKAESGGT------IVGQLRRLGVSVDWSRERFTMDEGLSKAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +    L  +G +Y G         +Q    D +
Sbjct: 160 LEAFIQLYEEGLIYRGQYLVNWCPASQSAVSDLE 193


>gi|319937416|ref|ZP_08011823.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807782|gb|EFW04375.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 876

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 33/181 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
              Y           +I     N TG +H+GH     + D +       G++        
Sbjct: 23  DHHYFEAGDVSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGFDAL------ 76

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                ++   ++   + +  +  +          G+    +G+E           F E+ 
Sbjct: 77  -WLPGMDHAGIATQAKVEARMRED----------GLSRYDLGRE----------KFLEKA 115

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           W         +    IIR+  + L +  D          G    ++ +   L  +G +Y+
Sbjct: 116 WS------WKEEYASIIRNQWEKLGLSLDYSKERFTLDEGLSEAVKTVFITLYEKGLIYQ 169

Query: 289 G 289
           G
Sbjct: 170 G 170


>gi|307317033|ref|ZP_07596474.1| valyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897121|gb|EFN27866.1| valyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 947

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 32/199 (16%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D +       G +V  +  
Sbjct: 22  ADAFRAGVNAKPDAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +                               V ++L ++      +   
Sbjct: 82  MDHAGIATQMV-------------------------------VERQLMERQLPSRRDMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  V ++  ++   +I + LK L    D          G    + ++  +L ++G +
Sbjct: 111 EAFIERVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSEAVIEVFVSLYKEGLI 169

Query: 287 YEGILPPPKSKTTQKCDMD 305
           Y            Q    D
Sbjct: 170 YRDTRLVNWDPKLQTAISD 188



 Score = 43.8 bits (102), Expect = 0.081,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 78/250 (31%), Gaps = 39/250 (15%)

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           +  L E +Y  V  K + K           NF  + W     ++        I   L   
Sbjct: 392 EPRLTEQWY--VDAKTLAKPAIAAVKEGRTNFVPKNWEKTYFEWMENIQPWCISRQLW-W 448

Query: 253 NIQHDIFISED---DFHRGDPSPIRDIIDNLAR-----QGYVYEGILPPPKSKTTQKCDM 304
             Q   +   D      R +   +   I +        + YV E +L   K       D 
Sbjct: 449 GHQIPAWYGPDGQIFVERNEEEALHAAIQHYIAHEGPMKAYV-EDLLENFKPGEILTRDE 507

Query: 305 DRKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           D     F S     + +G   + P L           D  Y       GFD +I+   + 
Sbjct: 508 DVLDTWFSSALWPFSTLGWPKETPEL-----------DKYYQTDVLVTGFD-IIFFWVAR 555

Query: 360 H---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                 +  +      A        + +      L RD    KMSK  G+ I    ++DE
Sbjct: 556 MMMMGLHFMK-----DADGTPVEPFHTVYVHA--LVRDKNGQKMSKSKGNVIDPLELIDE 608

Query: 417 VGSDSVRFMM 426
            G+D++RF +
Sbjct: 609 YGADALRFTL 618


>gi|290770198|gb|ADD61956.1| putative protein [uncultured organism]
          Length = 482

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 105/298 (35%), Gaps = 49/298 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MH+G+ R A+          GD +  +      +  +E Y++         A+
Sbjct: 9   APSPTGYMHIGNLRTALFTYLIAKQNGGDFILRI-----EDTDQERYVDG--------AV 55

Query: 180 SVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            V ++  + +  N  + P+ G   G Y++     +  KY+ EL+   E  +        +
Sbjct: 56  EVIYKTLKDVGLNWDEGPDIGGPVGPYIQSQRMGMFKKYAEELVEKGE-AYYCFCDKERL 114

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + +  I     +A  I          + R   +   + I      G  Y      P    
Sbjct: 115 EEVRAIQ----EASGIAPM-------YDRHCRNLSPEEIKEKLDAGVPYVIRQKIPTEGE 163

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D     +    + +    D+ L+K+DG  TY   + A     +  G  ++  V G+
Sbjct: 164 VTFHDELYGDITVDCSTLD---DQILIKTDGMPTY---NFANVVDDHLMGITHV--VRGN 215

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           ++     +   +  A   +     +     V         K+SKR GD  +   ++ +
Sbjct: 216 EYLASAPKYNLLYKAFGWE-----IPTYIHVEHIMKDKQHKLSKRDGDA-SYEDLMKK 267


>gi|297537731|ref|YP_003673500.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257078|gb|ADI28923.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 939

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 65/183 (35%), Gaps = 17/183 (9%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  K + E  F   +Y+ GSD   G+ +       A+  +     +L    V    DG  
Sbjct: 557 AVLKRRPELAFPADLYLEGSDQHRGWFQSSLLTGCAIDGRAPYNALLTHGFVV---DGAG 613

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +  + V+D  G+D +R        S  L      +K  ++        Y 
Sbjct: 614 HKMSKSKGNVVAPQKVMDTYGADILRLWTASTDYSGELTISDEILKRVAES-------YR 666

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R    F  A     D + DL P N   +  E D   L L   L     V+ +     E
Sbjct: 667 RIRNTMKFLLANIADFDANKDLLPVN---EWLEIDRYALHLTQKLQ--TEVLAD-YDRYE 720

Query: 518 PYK 520
            + 
Sbjct: 721 FHL 723


>gi|254480424|ref|ZP_05093671.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039007|gb|EEB79667.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 458

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 114/391 (29%), Gaps = 67/391 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL  L+                  Q  ++       Y + + + D  +
Sbjct: 38  HIGNARPVVVFDTLFRLLQ----------------TQYGSVT------YARNITDVDDKI 75

Query: 197 PEGYYPGVY-LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                 G   ++ V  E   KY  ++         P ++ ++   +  +I          
Sbjct: 76  IAAAKEGDRSIESVTDEYTAKYREDMAQL--NALPPSLEPHATHNIDAMIELT------- 126

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-YEGILPPPKSKTTQKCDMDRKQ----LL 310
               + E          +   ++++   G +    I         Q  D  R      L 
Sbjct: 127 --STLIEKGHAYESQGHVLFAVESMEDYGKLSNRSIDDMLAGARVQVADYKRHPGDFVLW 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             + +     D P  +    +    + +              I + G          E  
Sbjct: 185 KPADITDPGWDSPWGRGRPGWHLECSAM------IRAHLGETIDIHGGGRDLIFPHHENE 238

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            A  S      + +   +   Y D    KMSK  G+F T+R ++     + +RF +L   
Sbjct: 239 IAQ-SRCAHGGDYVKYWMHNAYLDIDGEKMSKSLGNFRTVRDLLQSYRGEVLRFALLSAH 297

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               L+F    +++       FY            R+  D+  D+D  L         ++
Sbjct: 298 YRSPLNFSVELLEQARSNLDGFY---------GTLREVADMEIDVDVPLADEPFYQALND 348

Query: 491 -----FDTSEL-QLIVHLAEYPRVIENATIA 515
                   +EL  L   L +       A   
Sbjct: 349 DLNTPLAIAELHALAKQLNK------AAAED 373


>gi|134302194|ref|YP_001122163.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166200210|sp|A4IYP1|SYI_FRATW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134049971|gb|ABO47042.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 935

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 39/250 (15%)

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS----------DGSYTYFAADLAYFKCKYE 346
           K  +K + D  +  F +       +    KS           GS +    DL     +  
Sbjct: 494 KVAEKIEKDGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDL---DKRLS 550

Query: 347 RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              D  +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G
Sbjct: 551 YPAD--LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLG 605

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +  + + + + +G+D +R           +     ++ +++ +             R + 
Sbjct: 606 NVTSPQDIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLR 653

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             A+ +  +LD      ++I  +      +  +     E+   I  A    + + +    
Sbjct: 654 NTARFLLSNLDGFNPVTDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV---- 708

Query: 526 YDLASVFHGH 535
              A + H  
Sbjct: 709 ---AQLIHHF 715


>gi|134300393|ref|YP_001113889.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134053093|gb|ABO51064.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 879

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 53/197 (26%), Gaps = 34/197 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                K       S   Y +    K     +     N TG +H+GH     + D L    
Sbjct: 13  KEVESKWYRHWEESKYFYAKVEKDKTPFCIV-MPPPNVTGQLHMGHALDNTLQDILTRWR 71

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY                            AL+   +D           + + KE  
Sbjct: 72  RMQGYN---------------------------ALWIPGTDHAGIATQAKVEEQLAKECQ 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            KY     +   EK+L  V  +  Q   + I   L+ L    D          G    + 
Sbjct: 105 SKY-----DLGREKFLERVWAWKEQYGNR-ITTQLRHLGASCDWDRERFTMDEGCSKAVL 158

Query: 275 DIIDNLARQGYVYEGIL 291
           ++   L  QG +Y    
Sbjct: 159 EVFVKLFEQGLIYRDYY 175


>gi|308270613|emb|CBX27225.1| Glutamyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 488

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 96/311 (30%), Gaps = 43/311 (13%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
           +LS   ++G  Y            I     +PTG +HVG  R A+     A  M   G  
Sbjct: 1   MLSGPCLAGKTYFLLEKNVNMDTVITRFPPSPTGYLHVGGARTALFNWLYARHMK--GRF 58

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V R   I D          +      +AL     D  EG Y       +  E  DK    
Sbjct: 59  VLR---IEDTDT--RRSTQASVDAIFEALEWLGIDWDEGPYFQSKRFDIYLEYIDKLID- 112

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                   +        ++ M        K    ++D      +  + D + +R      
Sbjct: 113 ----SGNAYYCTCSQEKLEEMRATAMASGKK--PKYDGTCRNKELKKTDNAVVR------ 160

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
                     +  P   TT   D+ +  ++F +T + D +   + +SDG+ TY   +LA 
Sbjct: 161 ----------IKAPLDGTTVVRDVIKNNIVFNNTELDDFI---ICRSDGTPTY---NLAV 204

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                    + +I   G DH     +   +  A+              V +       ++
Sbjct: 205 VVDDITMSINTIIR--GDDHVNNTPKQIIIYNALGHSLPVFGH-----VPMVLGSDKTRL 257

Query: 401 SKRAGDFITLR 411
           SKR G      
Sbjct: 258 SKRHGAMSVTE 268


>gi|229822985|ref|ZP_04449055.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271]
 gi|229787798|gb|EEP23912.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271]
          Length = 927

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 66/197 (33%), Gaps = 33/197 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +  + EG   P         + D   + F S   G      L   D  Y  F ADL  
Sbjct: 499 EAKDLLPEGFTHPASPNGKFTKETDIMDVWFDS---GTSYAGVLEARD--YLTFPADL-- 551

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                        Y+ GSD   G+       + A         VL    V    DG   K
Sbjct: 552 -------------YLEGSDQYRGWFNSSFTTSVAAKGVPPYKAVLSQGFV---LDGKGNK 595

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V++E+G+D +R  +L   +   +      +K+ ++         AY 
Sbjct: 596 MSKSLGNVIVPEEVMNELGADIIRLWVLSVDSESDVRISKDILKQIAE---------AYR 646

Query: 460 RCRSIFRQAKDIFPDLD 476
           + R+  R       D D
Sbjct: 647 KIRNTIRFMLSHVSDFD 663


>gi|189501861|ref|YP_001957578.1| isoleucyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497302|gb|ACE05849.1| hypothetical protein Aasi_0436 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 1108

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 43/230 (18%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   L+    D +  KMSKR G+ I    ++ 
Sbjct: 610 GVDQTRGWFFTLHAIAVMLFDSVAFKNVVSNGLI---LDKIGNKMSKRLGNSIDPFQIMQ 666

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G D++R+ M+   N  + L FD   + E +++          F+  YA          
Sbjct: 667 QHGPDALRWYMISNANPWDNLKFDTEGLVEVTRKFFSTLQNTYSFFALYANLD------- 719

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFYL 525
                   DF    ++ IP +   +     L     L ++   +     A EP +    +
Sbjct: 720 --------DFFFNKQSNIPLKGRPEIDRWILSRLHSLIQF---VTTELDAYEPTRACRAI 768

Query: 526 YD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            D +       +         +  Q  ++           A    + + L
Sbjct: 769 QDFVVDDLSNWYVRLNRKRFWKSEQTQDKT----------AAYQTLYTCL 808


>gi|126737891|ref|ZP_01753621.1| glutamyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126721284|gb|EBA17988.1| glutamyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 386

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 90/290 (31%), Gaps = 41/290 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 3   KPVVTRFAPSPTGFLHIGGARTALFNWLFAR---GRGGKFLLRIEDTDRARSTPEATEAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    ++D ++   +      + V ++L  +       F  +  +   +D +    
Sbjct: 60  LKGLAWLGLDHDGEVVSQFEGAARHREVAEQLL-EAGKAYKCFATQDEIAAFRDAAKSEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +       +   D        H   P  IR                +  P+   T  
Sbjct: 119 KSTLYRSPWRDSAPED--------HPDAPYAIR----------------IKAPQEGETVI 154

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  +  +++ +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 155 RDQVQGDVTIKNSQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+        V +   + L       K+SKR G      
Sbjct: 207 NNAARQMMIYDAMGWD-----VPIWAHIPLIHGPDGKKLSKRHGALGAQE 251


>gi|89098730|ref|ZP_01171612.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086692|gb|EAR65811.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 923

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 130/393 (33%), Gaps = 81/393 (20%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  +  L    E KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 414 IKDFRNELLEAVKETKWVPAWGETRLFNMVRD-RGDWCISRQRAWGVPIPVFYAE----N 468

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           GD     + ID                   +  + EG   P         + D   + F 
Sbjct: 469 GDSIITDETIDHVSALFREHGSNIWFEKEAKELLPEGFTHPGSPNGKFTKETDIMDVWFD 528

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVA 371
           S        + +L+               +   +R  D  +Y+ GSD   G+     + +
Sbjct: 529 SGS----SHQAVLEE--------------RDDLQRPAD--LYLEGSDQYRGWFNSSLSTS 568

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            AV+ K     VL         DG   KMSK  G+ +    V++++G+D +R  +     
Sbjct: 569 VAVTGKAPYKGVLSHGF---ALDGEGRKMSKSIGNVVVPAKVMNQLGADILRLWVASVDY 625

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              +      + +Q  E         Y + R+ FR       D + +   ++ +  E+  
Sbjct: 626 QADVRVS-DPILKQVAE--------VYRKIRNTFRFLLGNLADFNPE---KDAVVFENLR 673

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEP----YKLAFYL-YDLASVFHGHWSHGRENPRLR 546
           +  +  L+  L +  + ++ A    E     + +  +   DL       +        + 
Sbjct: 674 EVDQFMLVK-LNKLVKNVKEAYDRYEFAGIYHAINNFCTLDL----SSFY--LDFAKDVL 726

Query: 547 FVQANNRKLTMM--------RLQLVHAVASIIN 571
           +++A +               + L    A I++
Sbjct: 727 YIEAEDNADRRAIQTVLYESLVALAKLTAPILS 759


>gi|329313250|gb|AEB87663.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|327399172|ref|YP_004340041.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181801|gb|AEA33982.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 873

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 34/198 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS+  K       +G     N  GK    +I     N TG +H+GH     + D +   
Sbjct: 7   SPSFETKWYEFWEKNGYFQPANKEGK-ENFSIVIPPPNVTGALHIGHALNGTLQDIMVRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY V                           L+   +D        +  K +  + 
Sbjct: 66  KRMKGYNV---------------------------LWVPGTDHAGIATQNMVEKDLASKG 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   EK++  V ++  +   +II   +K L +  D               +
Sbjct: 99  IKKE-----DLGREKFVEKVWEWKEKYGNRIINQ-IKRLGLSCDWSRLRFTMDEQLSKAV 152

Query: 274 RDIIDNLARQGYVYEGIL 291
           R +   L ++G +Y+   
Sbjct: 153 RKVFVQLYKEGLIYKDKY 170


>gi|313903077|ref|ZP_07836471.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466579|gb|EFR62099.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 929

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + +    +    +  +    G   ++     N TG +H+GH     + D LA
Sbjct: 18  RYRPQDFEEDIYRFWLEERAFHADRDAPGPVFSMVIPPPNVTGNLHIGHALNNTMQDILA 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V  
Sbjct: 78  RWHRMQGDVTLWVPGTDHAGIATQHV-------------------------------VEV 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            LA +      +   E++L  V  +  Q    I+   L+ L    D          G   
Sbjct: 107 RLAREEGLRRQDLGRERFLERVWAWKNQYEANILGQ-LRRLGASVDWDRVRFTMDEGCSR 165

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R++   L  +G +Y G
Sbjct: 166 AVREVFVRLYEKGLIYRG 183


>gi|306843870|ref|ZP_07476465.1| methionyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275625|gb|EFM57349.1| methionyl-tRNA synthetase [Brucella sp. BO1]
          Length = 515

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 105/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R+D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     +R        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDKRWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|221141034|ref|ZP_03565527.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|302750421|gb|ADL64598.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|206559815|ref|YP_002230579.1| valyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|198035856|emb|CAR51747.1| putative valyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 955

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPSRPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I D ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQKSG-STITDQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|154354300|gb|ABS76237.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5198]
 gi|154354302|gb|ABS76238.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5186]
 gi|154354304|gb|ABS76239.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5335]
          Length = 130

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KIEALANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVK 115


>gi|57651406|ref|YP_185462.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160084|ref|YP_493218.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194292|ref|YP_499084.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220704|ref|YP_001331526.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|262049572|ref|ZP_06022441.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052418|ref|ZP_06024618.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|284023539|ref|ZP_06377937.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850305|ref|ZP_06791039.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|61216110|sp|Q5HIE5|SYC_STAAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894946|sp|Q2FJB0|SYC_STAA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123291881|sp|Q2G2M6|SYC_STAA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|172048774|sp|A6QEI2|SYC_STAAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631648|sp|A8YZM7|SYC_STAAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57285592|gb|AAW37686.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126058|gb|ABD20572.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201850|gb|ABD29660.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373504|dbj|BAF66764.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|259159664|gb|EEW44708.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162312|gb|EEW46885.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|294822817|gb|EFG39252.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302332243|gb|ADL22436.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|315196659|gb|EFU27006.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141606|gb|EFW33445.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320141766|gb|EFW33594.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329731047|gb|EGG67420.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 466

 Score = 47.6 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
 gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
 gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
          Length = 467

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 125/431 (29%), Gaps = 101/431 (23%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  ++ DTL   + + GY+VT   Y+                  Q 
Sbjct: 29  CGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVT---YV------------------QN 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +D  +   +  G+  + V  +   +Y  +            +K  +V   +     
Sbjct: 68  FTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLG-------IKRATVHPQVTD--- 117

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGILPPPKSK 297
                                +   I + I  L  +GY Y                 K  
Sbjct: 118 ---------------------NIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLS 156

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAA----DLAYFK---CKYERG 348
             ++ D++    +  +      +D  L   K +G   + +        +        +R 
Sbjct: 157 GQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRY 216

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I +            E   A    +  +       +   Y +    KMSK  G+F 
Sbjct: 217 LGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKYW-MHNGYININDEKMSKSKGNFF 275

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VRF ML       ++F   ++  Q+K                   + 
Sbjct: 276 TVRDISKLYDLEIVRFFMLSAHYRNPVNFS-DEMLNQAKAG---------------LERL 319

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAF 523
            +    L+F L        ES     E++L+  L  + +   +A             +  
Sbjct: 320 YNTKEKLEFTLSNL----VESPLTEKEVELVKELDGFRQKFIDAMDDDVNTADAVSVI-- 373

Query: 524 YLYDLASVFHG 534
             ++LA + + 
Sbjct: 374 --FELAKLINS 382


>gi|241896681|ref|ZP_04783977.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
 gi|241870162|gb|EER73913.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
          Length = 667

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 113/345 (32%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    V+ D  A        +V                   +    +  L  
Sbjct: 17  PSGKLHIGNTYTTVLADAAARYHRLLNEDVY-----------------FLTGTDEHGLKI 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +  ++   +S   L    + ++    DY  +A+ KI +  L  
Sbjct: 60  EQKAEKLNISPKEYVDQMAADIQKLWSD--LEISNDGFIRTTDDYHEKAVQKIFQKFLDQ 117

Query: 252 LNI---QHDIFIS---EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +I   Q++ + S   E+ F     + +    D     G    G       + +   +M 
Sbjct: 118 GDIYKGQYEGWYSVDDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVELVKEESYFFNMS 177

Query: 306 RKQLLFRST-MVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMIY 354
           +             +  +P  + +     F      DLA  +  ++ G       D+++Y
Sbjct: 178 KYADWLLDYYKTHPNFIQPSARMNEMIKNFIEPGLEDLAVTRTAFKWGVPVASDPDHVVY 237

Query: 355 VMGSDHSGYVKRLEAVAAAV----SEKKAQINVLLCELVRL------------------- 391
           V     S Y+ +L  ++           A ++++  E+VR                    
Sbjct: 238 VWIDALSNYITKLGYMSDDTTMFDKYWPANVHLVGKEIVRFHTIYWPIMLHALGLELPET 297

Query: 392 --------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                    RDG   KMSK  G+ +    + D  G D+VR+ +L 
Sbjct: 298 IVGHGWLTMRDG---KMSKSKGNVVYPDTLADRYGIDAVRYYLLR 339


>gi|224369583|ref|YP_002603747.1| IleS [Desulfobacterium autotrophicum HRM2]
 gi|223692300|gb|ACN15583.1| IleS [Desulfobacterium autotrophicum HRM2]
          Length = 936

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISED 263
            +  +  D     L       W+P      + +M++   D      ++  +   +F  E 
Sbjct: 418 FISMDKLDLRKKSLAEIDNVNWIPAWGKARIYSMIENRPDWCLSRQRSWGVPIPVFHCES 477

Query: 264 --DFH--RGDPSPIR--------DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             + +  R     I         DI      +  + EG +     K     D +   + F
Sbjct: 478 CGEIYVTRESVDKIHSLFTAHSSDIWFEWEAKDLMPEGAVCKSCGKDKFTKDHNILDVWF 537

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAV 370
            S   G      L + +G                ER  D  +Y+ GSD   G+       
Sbjct: 538 DS---GVSHAAVLEEREG---------------LERPAD--LYLEGSDQHRGWFHSSLLT 577

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A   + K    +VL    V    D    KMSK  G+ +    ++   G+D +R  +    
Sbjct: 578 AVGRTGKAPYKSVLTHGFVV---DSQGKKMSKSVGNVVAPEKIIKAHGADILRLWVASAD 634

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             + +      V + S          AY R R+  R       D +  +  R V   E  
Sbjct: 635 YRDDVRISDNIVNQLSD---------AYRRIRNTCRFMLGNLSDFNPAVDARPVENMEGL 685

Query: 491 FDTSELQLIVHLAEYPRVIEN---ATIAQEPYKL 521
                      L    +V+E    A    E + +
Sbjct: 686 DR-------FILHRLNQVLERCLGAYDTYEFHTI 712


>gi|254448547|ref|ZP_05062007.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261930|gb|EDY86215.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 680

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 81/264 (30%), Gaps = 43/264 (16%)

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCD 303
           LK        ++ + D   G  + + +  ++  +   +     Y G   P          
Sbjct: 194 LKDFEAFLQQWMQDSDVQSGVVNKMNEWFESGLQDWDISRDAPYFGFEIPDAPGKYFYVW 253

Query: 304 MDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYVM 356
           +D       S     +  G D D+     SD   Y +   D+AYF               
Sbjct: 254 LDAPVGYMASFRKLCSDQGIDFDQFWAADSDAELYHFIGKDIAYF--------------- 298

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              H+ +     A+      +             L  DG   KMSK  G FI  R  +D 
Sbjct: 299 ---HTLF---WPAMLKGAGFRPPSGVFCHGF---LTVDGQ--KMSKSRGTFIKARTYLDH 347

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP--VFYVQYAYARCRSIFRQAKDIFPD 474
           +  + +R+    +  + L D D      + + N   V  V    +RC    ++  +    
Sbjct: 348 LSPEYLRYYFAAKLGAGLEDIDLSLEDFRQRVNSDLVGKVINIASRCAGFVKKLGEGQLS 407

Query: 475 LDF---DLFPRNVIPQESEFDTSE 495
                 DLF +      +  D  E
Sbjct: 408 AQLGRQDLFDQAASASANIADLYE 431


>gi|126466399|ref|YP_001041508.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015222|gb|ABN70600.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 500

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 108/356 (30%), Gaps = 64/356 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P  P H+GH    V  D LA      G EV                         Q    
Sbjct: 14  PNAPPHIGHAYTTVFADVLARYHRLIGDEV------------FFMTGNDEHGLKLQRAAE 61

Query: 192 NDSDLPEGYYPG-VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDD 248
                P+ +      +     EL D      +   ++    +VK    +   K  + +  
Sbjct: 62  KKGVHPKQFVDEMADVYKKYWELLDISYDYFIRTTDDYHEKVVKTAIQKLYDKGLVYKAS 121

Query: 249 LKALNIQHD-------------------------IFISEDDFHRGDPSPIRDIIDNLARQ 283
                                              ++ E+ ++         IID L  +
Sbjct: 122 YAGWYCVDCEKFYSPGEYIEINGKPHCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNK 181

Query: 284 GYVYEGILPPPKSKTTQKCDMDR-------KQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
             VY            +K  +         +++ +   +  D      +  D    Y + 
Sbjct: 182 DIVYPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISG 241

Query: 337 DLAYFK--CKYERGFDNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            + Y +   ++ + + N+ +V+G D    +     ++  A+  +  +  ++   L+    
Sbjct: 242 -IGYLEDMDRFNKYWPNVHHVIGKDILWFHTVVWFSILKALDIELPKKLLVHAFLIN--- 297

Query: 394 DGMPIKMSKRAGDFITLRHVVDEV-GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
               +K+ K AG+ I +  ++D    SD VR++++         F+  K  + S E
Sbjct: 298 --RGLKIGKSAGNVIAIEDLIDRYQDSDGVRYILMR-------VFNMDKDVDVSTE 344


>gi|147906|gb|AAA24657.1| valyl tRNA synthetase [Escherichia coli]
          Length = 951

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGAEAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|89255846|ref|YP_513208.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314333|ref|YP_763056.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501826|ref|YP_001427891.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010068|ref|ZP_02274999.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|122325634|sp|Q0BNB5|SYI_FRATO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123287343|sp|Q2A4Z4|SYI_FRATH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200208|sp|A7NAD2|SYI_FRATF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89143677|emb|CAJ78876.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129232|gb|ABI82419.1| isoleucine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252429|gb|ABU60935.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 935

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 39/250 (15%)

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS----------DGSYTYFAADLAYFKCKYE 346
           K  +K + D  +  F +       +    KS           GS +    DL     +  
Sbjct: 494 KVAEKIEKDGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDL---DKRLS 550

Query: 347 RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              D  +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G
Sbjct: 551 YPAD--LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLG 605

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +  + + + + +G+D +R           +     ++ +++ +             R + 
Sbjct: 606 NVTSPQDIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLR 653

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             A+ +  +LD      ++I  +      +  +     E+   I  A    + + +    
Sbjct: 654 NTARFLLSNLDGFNPVTDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV---- 708

Query: 526 YDLASVFHGH 535
              A + H  
Sbjct: 709 ---AQLIHHF 715


>gi|302879726|ref|YP_003848290.1| valyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582515|gb|ADL56526.1| valyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 941

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 64/327 (19%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +       SG         K     I+    N TG +H+GH     + DTL       G
Sbjct: 14  ARWYPKWEESGYFNAGTDPAKTESFCIQLPPPNVTGTLHMGHGFNQTLMDTLTRYHRMRG 73

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                +   + AG   QI                                  V +   D 
Sbjct: 74  DNTLWQPGTDHAGIATQI----------------------------------VVERQLDA 99

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 +   E ++  V ++   +   I R  ++ L    D          G    + + 
Sbjct: 100 QGISRHDLGREAFIEKVWEWKKFSGDTITRQ-MRRLGTSPDWQRERFTMDEGLSQSVTET 158

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L  +G +Y G               D + +          +  PL + D    +   
Sbjct: 159 FVRLFNEGLIYRGKRLVNWDPKLHTAVSDLEVVQEEEDGFMYHIRYPLAEVD--TLHGLT 216

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
            L     + E        ++G            VA  +  +  +   L+ ++VRL     
Sbjct: 217 HLTVATTRPET-------LLGD-----------VAVMIHPEDERYQHLIGKMVRLP---- 254

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +  R    I   +V  E G+  V+
Sbjct: 255 ---LCDRLIPVIADDYVDREFGTGCVK 278


>gi|220904888|ref|YP_002480200.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869187|gb|ACL49522.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 837

 Score = 47.6 bits (112), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +   +   +   +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPQAIEEKWQARWQAENAFACSHESNKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVA 64

Query: 152 SLMAFSGYEV 161
                 GY V
Sbjct: 65  RNKRMQGYNV 74



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 12/96 (12%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQI----NVLLCELVRLYRDGMPIKMSKRAG 405
           Y+ G +H+     Y +    V   +     ++    N LL + + L   G   KMSK  G
Sbjct: 539 YIGGVEHAILHLLYSRFFTKVLRDMGFFPPELSEPFNNLLTQGMVLKDGG---KMSKSKG 595

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           + +    ++ + G+D+VR   L+   +E  DFD+  
Sbjct: 596 NVVDPTEMIKKYGADTVRLFCLFAAPAER-DFDWSD 630


>gi|167465172|ref|ZP_02330261.1| valyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 853

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 51/188 (27%), Gaps = 33/188 (17%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +     I     N TG +H+GH     + D +       GY+                 
Sbjct: 6   PEREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDAL--------------- 50

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                             LP   + G+  +   ++   +      +   E +L  V D+ 
Sbjct: 51  -----------------WLPGSDHAGIATQTKVEQKLREEGVSRYDLGREAFLEKVWDWK 93

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +     IR+    + +  D          G    +R +   L  +G +Y G        
Sbjct: 94  -ELYAGTIREQWGKMGLSLDFSRERFTLDEGLSKAVRKVFVKLYDKGLIYRGKYIINWDP 152

Query: 298 TTQKCDMD 305
             +    D
Sbjct: 153 AARTALSD 160



 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 17/162 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +IY   +        + +      +   +  ++      L RD    KMSK  G+
Sbjct: 457 TGYD-IIYFWVAR------MIFSSLEFTGQIPFKDVLVHG----LVRDAEGRKMSKSLGN 505

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    V+ + G+D++R+M+       + L F + +V++       F  +   A   ++ 
Sbjct: 506 GIDPLEVIKQYGADAMRYMLSTSSTPGQDLRFRWERVEQARN----FANKIWNASRFALM 561

Query: 466 RQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYP 506
                   DLDF      +       F+ +   +   L +Y 
Sbjct: 562 NLEGFNMEDLDFGGELGTSDRWILHRFNETARDVTRLLDQYE 603


>gi|75388379|sp|Q7X2N3|SYV_SPHEL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|32188220|gb|AAP46185.1| putative valyl-tRNA synthetase [Sphingomonas elodea]
          Length = 811

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 57/218 (26%), Gaps = 38/218 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +     +         R          I     N TG +H+GH     + D L 
Sbjct: 7   TFDPAEIESRWYAHWED-EGLFRPERTGAEPWTIVNPPPNVTGSLHIGHALDNTLQDILV 65

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G +       + AG   Q+      V  R   A                     
Sbjct: 66  RHARLKGKDARWVVGTDHAGIATQM------VVERQLNA--------------------- 98

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                    S+  +F  E ++  V ++  ++  +I R  L+ L    D          G 
Sbjct: 99  -------AGSKRTDFTREAFVDKVWEWKAESGGQITRQ-LRRLGCSMDWANERFTMDEGF 150

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              +  +   L RQG VY                 D +
Sbjct: 151 SKAVLKVFVELYRQGLVYRDKRLVNWDPGLGTAISDLE 188



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 17/82 (20%)

Query: 348 GFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           GFD +++   +       +          V  K   ++        L R     KMSK  
Sbjct: 502 GFD-ILFFWDARMMMQGLHF------MKEVPFKTLYLH-------GLVRAADGQKMSKSK 547

Query: 405 GDFITLRHVVDEVGSDSVRFMM 426
           G+ +    ++D+ G+D++RF M
Sbjct: 548 GNTVDPLGMIDKYGADALRFFM 569


>gi|332878550|ref|ZP_08446270.1| glutamate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683451|gb|EGJ56328.1| glutamate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 500

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 99/287 (34%), Gaps = 40/287 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  +  Y+  A   I     
Sbjct: 7   APSPTGALHIGGVRTALFNYLFAKKHGGDFLLRI-----EDTDQNRYVEGAEQYIINSLN 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +   Y + +       P       Y +   K L  +Y+  L+N     W     D +  
Sbjct: 62  WLGLTYDEGVGKEGKHAP-------YRQSERKPLYKQYADTLINNG---WAYYAFDTA-- 109

Query: 240 AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             ++  R + +         + + +           ++   L  QG  Y      P+ + 
Sbjct: 110 EALEKARQECEEKGDTFIYNWATRNTLENSLSLTSEEVQQRLT-QGDAYVVRFKMPEKEI 168

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM R ++   ++ +    D+ L KSDG  TY    LA     +     ++I   G 
Sbjct: 169 LKMSDMIRGEVTIDTSTLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--GE 220

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    +     +  A   +       L  +++   +G   K+SKR G
Sbjct: 221 EWLPSMPLHLLLYRAFGWQAPAFAH-LPLILKPVGNG---KLSKRDG 263


>gi|312898161|ref|ZP_07757552.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
 gi|310620658|gb|EFQ04227.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
          Length = 931

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 77/247 (31%), Gaps = 35/247 (14%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D       +  + EG   P    T  + + D   + F S      V              
Sbjct: 503 DAWWAHTEKELLPEGFKCPECGCTEFRKESDIMDVWFDSGCTHQGV-----------LCH 551

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             +LAY    Y  G D         H G+       + A +       VL         D
Sbjct: 552 DPELAYPADMYLEGSD--------QHRGWFNSSLLTSVAANGIAPYKAVLTHGF---TVD 600

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK  G+ +  + V+D+ G+D +R  +        +      +K+ S        
Sbjct: 601 GEGRKMSKSVGNTVAPQEVIDQYGADVMRLWVSSADYQGDVRLSPKILKQLSD------- 653

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              Y + R+ FR       D + +    + +  +   +  +  L+  L +    +  A  
Sbjct: 654 --VYRKIRNTFRFLLGNINDFNPE---TDAVSYKDMSEIDKWALLR-LEQVLETVTEAYE 707

Query: 515 AQEPYKL 521
             + + +
Sbjct: 708 NYQFHVM 714


>gi|226309783|ref|YP_002769677.1| glutamyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226092731|dbj|BAH41173.1| glutamyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 488

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 93/303 (30%), Gaps = 54/303 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178
           + +PTG +H+G  R A+          G  +  +   +     +E        Q+  L  
Sbjct: 10  APSPTGHLHIGGARTALFNYLFAKHHGGSFIVRI-EDTDQTRNKENADE---EQMKNLKW 65

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKD 235
           L V W     +        +     +Y K++ + LA+    Y        + +    +  
Sbjct: 66  LGVTWEEGTDVGGPYGPYRQTERLDIYRKYIDQLLAEGKAYYCYATKEELDAEREEQLAR 125

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                +++  R        Q+                          +G V         
Sbjct: 126 GETPRILEKHRHVTDEQRAQY------------------------EAEGRVPSIHFLVQD 161

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +     D+ R Q+ F S  +GD     + + DG  TY   + A     Y     ++I  
Sbjct: 162 DREYVVNDLIRGQVTFNSNEMGDF---VICRPDGIPTY---NFAVVVDDYLMKISHVIR- 214

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G +H     R   +  A   +      L    + L +DG   KMSKR    +       
Sbjct: 215 -GEEHLSNTPRQLMIYEAFGWEAPDFAHL---ALILNQDGK--KMSKRDESILQFIEQYR 268

Query: 416 EVG 418
           ++G
Sbjct: 269 DLG 271


>gi|163782529|ref|ZP_02177526.1| glutamyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882102|gb|EDP75609.1| glutamyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 471

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 103/288 (35%), Gaps = 38/288 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A     +G E            +I         R  + 
Sbjct: 7   APSPTGYLHLGNARTAIFSYLFAR---HNGGEFV---------LRIEDTDRERSRREYEE 54

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   D +     +   Y +    ++  +Y  +LL             +     ++  R +
Sbjct: 55  MLLKDLEWLGMEWDEFYRQSERFDIYREYVEKLLQSGHAYPC-----FCTPEELEEERKE 109

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +   + +        +     +   D +++L R+G  +      P+ +     D+ +  
Sbjct: 110 AQKRGVAYR-------YSGKCRALSPDEVESLKREGKSFTIRFRVPEGEEVVFEDLVKGY 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +   GD     +++SDGS TY    +         G  ++  V G DH     +  
Sbjct: 163 ISINADDFGDF---VIVRSDGSPTYNFVVV---VDDALMGITHV--VRGEDHIPNTPKQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +  A+  +  +   L    V L  D    K+SKR G  +++++  +E
Sbjct: 215 LIYRALGFEVPRFAHL---PVILGED--RSKLSKRHG-AVSVKNYREE 256


>gi|254368674|ref|ZP_04984688.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121589|gb|EDO65766.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 935

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 39/250 (15%)

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS----------DGSYTYFAADLAYFKCKYE 346
           K  +K + D  +  F +       +    KS           GS +    DL     +  
Sbjct: 494 KVAEKIEKDGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDL---DKRLS 550

Query: 347 RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              D  +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G
Sbjct: 551 YPAD--LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLG 605

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +  + + + + +G+D +R           +     ++ +++ +             R + 
Sbjct: 606 NVTSPQDIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLR 653

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             A+ +  +LD      ++I  +      +  +     E+   I  A    + + +    
Sbjct: 654 NTARFLLSNLDGFNPVTDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV---- 708

Query: 526 YDLASVFHGH 535
              A + H  
Sbjct: 709 ---AQLIHHF 715


>gi|90421808|ref|YP_530178.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|122995674|sp|Q21CM7|SYL_RHOPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90103822|gb|ABD85859.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 882

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       + I   +N   +     +E     P+G +H+GH R   +GD +A  M   GY
Sbjct: 14  RWQRQWDDNAIFATQNDDPRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGY 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|257784887|ref|YP_003180104.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473394|gb|ACV51513.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 536

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 123/359 (34%), Gaps = 60/359 (16%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
             P H+G   C ++ D  A     +GY+V     +++ G ++  LA +      QA  ++
Sbjct: 19  AKP-HLGTAYCTLLCDIQARFRRAAGYDVFFLTGMDEHGEKVA-LAAADHGLSPQAWCDS 76

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK---IIRDDL 249
                +G Y  + + +           + +   +E+ +  V  Y  + M +   I +   
Sbjct: 77  QVPFFKGLYEELNISY----------DDFIRTTDERHVKAV-QYLWERMREAGFIYKGSY 125

Query: 250 KALNIQHD-IFISEDDFHRGDPSP----------IRDIIDNLARQGY-----VYEGILPP 293
                 H+  F +E    + D                 ++ ++ + +      ++  L  
Sbjct: 126 DGWYCIHEETFFTETQVEKADEEAGCKGAHLCPDCHRELERVSEESWFFKLSAFQDKLLE 185

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS--------------------DGSYTY 333
             ++     + D +    RS +     D  + ++                    D    Y
Sbjct: 186 LYAEHPDFIEPDFRANEVRSFVESGLQDISVSRTSFDWGIPVPFDESHVTYVWFDALLNY 245

Query: 334 FAA-----DLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCE 387
           + A     D        +R +   ++V+G D    +     A+  A+ E   +       
Sbjct: 246 YTAVGYGDDSPEAAAMRKRFWPAQMHVVGKDIIRFHCVIWPAMLMALGEAVPEHIFAHGF 305

Query: 388 L-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKE 444
           L VR    G+  KMSK  G+ I  + V+D +G +  R + M      E     F ++++
Sbjct: 306 LNVRNSETGVVEKMSKSRGNAIAPKDVLDLLGVEGYRYYFMTDVTPGEDSGISFERMEQ 364


>gi|229816447|ref|ZP_04446748.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
 gi|229807989|gb|EEP43790.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
          Length = 548

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 118/381 (30%), Gaps = 74/381 (19%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
             + +          +         I +V+A+P    H+G     ++ D  A     +GY
Sbjct: 3   HCIKTKEGRKPRVMSSKPSYYITTPIYYVNADP----HLGTAYSTIIADVQARYRRAAGY 58

Query: 160 EVTREYYINDAGAQI---------------------------------NTLALSVFWRYQ 186
            V     +++ G ++                                 +    +   R +
Sbjct: 59  NVKFLTGMDEHGQKVAEAAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQK 118

Query: 187 QALYNNDSDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKW--------------L 230
           +A+      + E  Y   G Y           ++   ++  +E                L
Sbjct: 119 RAVQYLWERMQEAGYIYKGSYDGWYCVPDETFFTETQVDKADEARGTKGEHLCPDCDRPL 178

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEG 289
             VK+ S    +   +D L AL  +H  F+  D       S +   +++L+  +     G
Sbjct: 179 ERVKEESWFFKLSAFQDKLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWG 238

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           I  P   +       D       +   G + D             AAD AY +   +   
Sbjct: 239 IEVPFDDEHVTYVWFDALINYMTAVGYGAEGDEA-----------AADFAY-RWPAQTH- 285

Query: 350 DNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDF 407
                ++G D    +     A+  A+ E   +       L V+    G   KMSK  G+ 
Sbjct: 286 -----IVGKDIIRFHCVIWPAMLMALGEALPEHVFAHGFLTVKNEETGKAEKMSKSRGNA 340

Query: 408 ITLRHVVDEVGSDSVRFMMLW 428
           I  R V++++G +  R+  + 
Sbjct: 341 IAPREVIEKLGVEGYRYYFMT 361


>gi|161618949|ref|YP_001592836.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566464|ref|ZP_05836934.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335760|gb|ABX62065.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260155982|gb|EEW91062.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 515

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 105/338 (31%), Gaps = 34/338 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L N++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTY 333
              G++        +++      +  K L    T         GD+     +  D    Y
Sbjct: 181 NNPGFIMPA---ERRNEIVSFVKLGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNY 237

Query: 334 FAADLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
             A L Y     ER        +++G D    + R  AV        AQ+ +        
Sbjct: 238 ITA-LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHG 292

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +      KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 293 FLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|150014947|ref|YP_001307201.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901412|gb|ABR32245.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 645

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 79/498 (15%), Positives = 143/498 (28%), Gaps = 139/498 (27%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D LA     +GY+V                              
Sbjct: 18  PSTKLHIGNTYTTVAADALARFKRLTGYDV--------------MFLTGT---------- 53

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    EEK   I     V  ++  I+D    
Sbjct: 54  -----------------------DEHGQKIQRIAEEKG--ITPKQHVDEVVAGIKDLWSM 88

Query: 252 LNIQHDIFI-SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK--------------- 295
           +NI +D FI + DD+H      ++DI   L  QG +Y+                      
Sbjct: 89  MNISYDKFIRTTDDYH---IKAVQDIFKKLYDQGDIYKSSYEGWYCTPCESFWTDTQLVN 145

Query: 296 ----SKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----------KSDGSYTYFAA----D 337
                          +   F+ +   D + + +           + +     F      D
Sbjct: 146 GNCPDCGRPVEKSKEEAYFFKMSKYADKLIKYIEDHPEFIQPESRKNEMLNNFLRPGLQD 205

Query: 338 LAYFKCKYERG----FD--NMIYVM-----------GSDH---SGYVKRLEAVAAAVSEK 377
           L   +  +  G    FD  +++YV            G        Y K   A    + + 
Sbjct: 206 LCVSRTSFNWGVPVTFDESHVVYVWIDALSNYITALGYGQENKDLYNKYWPADVHLIGKD 265

Query: 378 KAQINVLLCELVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             + + +   ++ +  D                  KMSK  G+ +    +V+E G D VR
Sbjct: 266 ILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNEFGVDPVR 325

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           + +L       + F    +      N +F  +     C  +          ++       
Sbjct: 326 YYLLKE-----IPFGADGLFN----NEIFIKKINSDLCNDLGNLLSRTVAMVEKYFGGEM 376

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLAFYLYDLASVFHGHWSHGREN 542
               E E    E  LI      P  IE A      P  L  Y+++L    + +      +
Sbjct: 377 PAQDEKEAIDDE--LINLALSAPAKIEEAINELNIPQAL-EYVFELIRRANKY-----ID 428

Query: 543 PRLRFVQANNRKLTMMRL 560
               ++ A +      RL
Sbjct: 429 ETTPWILAKDES-KKARL 445


>gi|258452738|ref|ZP_05700736.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282924443|ref|ZP_06332115.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|257859611|gb|EEV82461.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282592854|gb|EFB97858.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
          Length = 471

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 4   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 61

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 62  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 113

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    +  +  +KD   Q           A     D++     F  G        
Sbjct: 114 TSNPRVMDHMDDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       D P  +    +    +
Sbjct: 164 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECS 214

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 215 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 266

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 267 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 319


>gi|256005887|ref|ZP_05430834.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990156|gb|EEU00291.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316940919|gb|ADU74953.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 884

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 73/273 (26%), Gaps = 42/273 (15%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P  +   L +  +    +   +  + T   I     N TG +H+GH     + 
Sbjct: 5   NIAKTYDPKQVEDRLYAEWMEKGYFHAEIDKEKTPFTIVIPPPNITGQLHMGHALDETLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY     +      A I T A  V    ++ +   D              
Sbjct: 65  DILIRWKRMQGY--CTLWLPGTDHASIATEAKIVEAMAKEGITKEDI-------GREKFL 115

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               E    Y                           I + LK L    D          
Sbjct: 116 ERAWEWKRHYGGR------------------------IVEQLKKLGCSCDWQRERFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVG-DDV 320
           G    + ++   L ++G +Y G            S +  + + + K   F        D 
Sbjct: 152 GLSRAVIEVFVRLYKKGLIYRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPVKDS 211

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           D  ++ +         D A      +  + ++I
Sbjct: 212 DEFVVVATTRPETMLGDTAVAVHPEDERYKHLI 244



 Score = 37.2 bits (85), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        + +      ++  +   +      + 
Sbjct: 471 TEDLKYFYPTDVLVTGYD-IIFFWVAR------MIFSALEHTGKEPFKYVFIHG----IV 519

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSK 447
           RD +  KMSK  G+ I    ++D+ G+D++RF + +       L F   K +    
Sbjct: 520 RDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 575


>gi|154354296|gb|ABS76235.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5320]
 gi|154354298|gb|ABS76236.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5273]
          Length = 130

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KIETLANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVS 108
            I   G+I+L L+   L   L  +V  
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVEK 116


>gi|293476561|ref|ZP_06664969.1| valyl-tRNA synthetase [Escherichia coli B088]
 gi|291321014|gb|EFE60456.1| valyl-tRNA synthetase [Escherichia coli B088]
          Length = 954

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 7   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 67  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 96  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 155 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 212

Query: 332 TYFAAD 337
           T    D
Sbjct: 213 TADGKD 218


>gi|290559069|gb|EFD92442.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 483

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 65/405 (16%), Positives = 133/405 (32%), Gaps = 64/405 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH     V D  A     +G  V      ++ G +I   AL    +  + L + +SD 
Sbjct: 18  HIGHAYTTFVADVFARWYRLNGENVFFLTGTDEHGGKIEKSALE-KGKTPKELVDENSD- 75

Query: 197 PEGYYPGVYLKHVGKELADKYSS--ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
                     + V ++L   Y+      ++  EK + +     V     I + +      
Sbjct: 76  --------KYRQVWEKLNISYNRFIRTTDYSHEKAVKLF-LQKVWDNGDIYKGEYTGFYC 126

Query: 255 QHD-IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMDRKQ 308
             D  +I+E +   G        +  ++ + Y      Y+  +    +      + +  +
Sbjct: 127 LPDERYITESELLDGKCPTCGREVQKISEEAYFFRLSKYKDKIVDAITNGFIIPEKNANE 186

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM------------ 356
           +L R      D+D                   +  K+     + +YV             
Sbjct: 187 ILSRLNGELKDLD------------ITRKNVSWGIKFPFDESHSVYVWFDALINYLSGLD 234

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---------------KMS 401
             D         A    V ++    + ++     L+  G+P+               KMS
Sbjct: 235 WPDGENVKTFWPADIHLVGKEIVWFHSVIWPA-MLFSAGIPVPKRIVAHAWWTVDGKKMS 293

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           K  G+ +    +V++ G+D+ R+ ++  K   +  DF    +K +     +  +    AR
Sbjct: 294 KSIGNVVNPIDMVEKYGADAFRYFLIREKPVWDDGDFSESALKNRINGELMSDLSNLVAR 353

Query: 461 CRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDT-SELQLIVH 501
             ++  + K      PDL+  +    V      +D  S + LI  
Sbjct: 354 VLTLAEKFKGKITGNPDLEGFIDEEKVRAAFDNYDPYSAINLIFE 398


>gi|259503091|ref|ZP_05745993.1| glutamate-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168957|gb|EEW53452.1| glutamate-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 501

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 107/295 (36%), Gaps = 34/295 (11%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA----QINT 176
            KV + + + +PTG +H+G+ + A+     A    F+G  V R   I D       Q   
Sbjct: 3   QKVRVRY-APSPTGFLHIGNAQSALFNYLFAR--HFNGTMVLR---IEDTDTKRNVQTGE 56

Query: 177 LALSVFWRYQQALYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +      +    ++   + P   Y P    +   + +  KY  ELL+          KD
Sbjct: 57  DSQRENLHWLGIDWDEGPNKPNPKYAPYRQSERNAQGIYHKYVQELLDKGI-----AYKD 111

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y+ +  ++ +R+  +  N +   +               +       +G         PK
Sbjct: 112 YTTEEELQEMRER-QRANKEAPHYDGR------WYGKSEEEQKAAEAKGLKPTIRFHFPK 164

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               Q  D+ R  + F S  +G D    + KSDG  TY   + A     +     +++  
Sbjct: 165 DHEYQWDDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDITHVLR- 218

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            G+DH     +  A+  A+  +      + C +  ++      K+SKR  D +  
Sbjct: 219 -GADHISNTPKQMAIYEALGWEHP----VFCHIPLIFNPKTRKKLSKRDKDTLQF 268


>gi|256088806|ref|XP_002580515.1| valine-tRNA ligase [Schistosoma mansoni]
 gi|238666098|emb|CAZ36754.1| valine-tRNA ligase [Schistosoma mansoni]
          Length = 1112

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 12/161 (7%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +HVGH     + D +A      G  V     ++ AG        S+  R     
Sbjct: 105 PNITGTLHVGHALTCTIQDAIARCYRMHGKTVLWVPGMDHAG----IATQSIVERDLLKQ 160

Query: 190 YN-NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           Y+ N S  P        L           S+  L    E ++  + D+  Q   ++IR+ 
Sbjct: 161 YSLNSSQFPNNQSKSSVL------SCQFPSNPRLLLGRENFIQRIWDWKNQH-AELIREQ 213

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           L +L +  D               + +    L   G +Y+ 
Sbjct: 214 LNSLGLCLDWSREFFTLSPSHSECVTEAFLRLYNAGLIYQS 254


>gi|161508769|ref|YP_001574428.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|160367578|gb|ABX28549.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 476

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 9   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 66

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 67  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 118

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    +  +  +KD   Q           A     D++     F  G        
Sbjct: 119 TSNPRVMDHMDDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 168

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       D P  +    +    +
Sbjct: 169 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECS 219

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 220 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 271

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 272 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 324


>gi|281357158|ref|ZP_06243647.1| glutamyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316189|gb|EFB00214.1| glutamyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 489

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 103/291 (35%), Gaps = 34/291 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    LA   +  G  V R     D    +      ++   + A
Sbjct: 13  APSPTGFMHVGNLRTALYAYLLAR--SSRGKFVLRIE-DTDRNRLVKDAVKVIYNTMKLA 69

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             ++D     G   G Y++   K L  +Y+ EL+      +          A  +   + 
Sbjct: 70  GLSHDEGPDVGGEYGPYVQSERKPLYKEYAEELVKKGA-AYYCFCDKTEEAAEEEHASET 128

Query: 249 --LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                   +      E +   G P  IR  ID        +  ++    +   +  D   
Sbjct: 129 VGYDGRCRKLAPAEVEANLAAGKPYVIRQKID--KEGSTTFHDLVFGDITIENKVLD--- 183

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVK 365
                         D+ LLK DG  TY  A++       +     + +V+ GS++     
Sbjct: 184 --------------DQILLKRDGMPTYNFANV------VDDHLMKISHVVRGSEYLPSTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A      Q   L   + R   DG   K+SKR G  ++  +++++
Sbjct: 224 KYNLLYRAFGWPVPQYVHLPLIMGR-NEDGTIAKLSKRHGS-VSFENLLED 272


>gi|169860707|ref|XP_001836988.1| valine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116501710|gb|EAU84605.1| valine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 1078

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 51/194 (26%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +       +        G +   KG    I     N TG +H+GH     + DTL     
Sbjct: 126 AAWYDWWVAQGFFKPTLGPDGKPKGDVFVIPAPPPNVTGSLHIGHALTVAIQDTLVRWNR 185

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG        SV                           V K L  
Sbjct: 186 MLGKSTLFVPGFDHAG----ISTQSV---------------------------VEKRLYK 214

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                  +   EK+L  V D+  +   +I +  L  L   +D   +           + +
Sbjct: 215 TTGKTRHDLGREKFLETVMDWKNEYQDRITKQ-LHRLGGSYDWDRAAFTMDEKLSKAVIE 273

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 274 TFCKLHEDGILYRA 287


>gi|157136115|ref|XP_001663660.1| valyl-tRNA synthetase [Aedes aegypti]
 gi|108870043|gb|EAT34268.1| valyl-tRNA synthetase [Aedes aegypti]
          Length = 931

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 61/216 (28%), Gaps = 36/216 (16%)

Query: 93  LSPSYLRKILSS---IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L  +Y    + +     +           +  K ++     N TG +H+GH     + D 
Sbjct: 1   LDSAYQPARVEAANRRNIDARIAPVADDARNKKFSLLLPPPNVTGELHLGHALTCAIQDV 60

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G+        + AG     + +    + ++ L  +D           +L+ +
Sbjct: 61  LVRWKEKEGFAPVWIPGTDHAGIA-TQVVVEKKLQKERGLGRHDLG------REEFLREI 113

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            K  A+K                            I +DL  +  + D            
Sbjct: 114 WKWKAEKAGR-------------------------IEEDL-RMGSRMDWNREYFTMDERQ 147

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              +++    L  +G +Y        S + +    D
Sbjct: 148 TEAVKEAFVRLFEKGMIYRDKSLVNWSCSLESAISD 183


>gi|84686162|ref|ZP_01014057.1| valyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665689|gb|EAQ12164.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 1030

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 29/157 (18%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKS 327
           ++ ID LA     Y     P K       D D     F S      T+   +    L K 
Sbjct: 568 KEAIDVLAETLATYTVDQDPSKLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEETPELAK- 626

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                YF  D+         GFD +++         V R+  +  AV EK+    V L +
Sbjct: 627 -----YFPTDV------LVTGFD-ILFFW-------VARMMMMQLAVVEKEPFHTVYLHQ 667

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
           LV   RD    KMSK  G+ I    ++DE G+D++RF
Sbjct: 668 LV---RDEKGKKMSKTTGNVIDPLEIIDEYGADALRF 701



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 16/211 (7%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA----QI 174
           +     +     N TG +HVGH     + D L       G++   +   + AG     Q+
Sbjct: 34  RDETFTVMIPPPNVTGALHVGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQLQV 93

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEK 228
             +  +     ++ L           + G Y   + ++L       D   +       + 
Sbjct: 94  EKMLAATQQPSRRELGREAFLDKVWEWKGQYGGTIVEQLKRLGASCDWDRNAFTMAGADG 153

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDI-IDNLARQG 284
                 + S      +I+  L                   DP   + I D+ ++N+  QG
Sbjct: 154 DPRTGHENSPNFHDAVIKVFLDMYQKGFI--YRGKRLVNWDPHFETAISDLEVENIEVQG 211

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           +++    P    +T    + D    +  +  
Sbjct: 212 HMWHFKYPLAGGETYTYVEKDEDGNVVLTEE 242


>gi|326566780|gb|EGE16919.1| valyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326575221|gb|EGE25149.1| valyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326576693|gb|EGE26600.1| valyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 975

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVRLYDEGLIYRG 177


>gi|299143372|ref|ZP_07036452.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517857|gb|EFI41596.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 657

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 61/417 (14%), Positives = 127/417 (30%), Gaps = 51/417 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH  C V  D +       GY+V      ++ G +I   AL      ++ + N
Sbjct: 14  PSGNLHIGHTYCTVAADCIKKYKKLQGYDVFFTTGTDEHGQKIQQKALEEGLEPKEYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKI 244
               + E           +++    E             E  E +    + +        
Sbjct: 74  IVVSIKELWSKMDIDYDAFIRSTDPEHEKNVQEIFKKLYEKGEIYKSQYEGHYCTQCEAF 133

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPS--PIRDIIDNLARQGYVYEGILPPPKSKTTQ-- 300
             +       +      E    + +     +    D L +    +   + P   K     
Sbjct: 134 WTESQLKDGDKCPDCGRETHIEKEESYFFKLSKYRDRLLKYYEDHPDFIEPVSRKNEMIN 193

Query: 301 ---KCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKC--KYERGFD 350
              K  +D   +   S   G     DD     +  D    Y +A + Y     K+E+ + 
Sbjct: 194 NFLKDGLDDLSVTRSSFDWGVKVPFDDKHIVYVWIDALSCYLSA-IGYGTDNEKFEKFWP 252

Query: 351 NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++++G +    + R   +      ++        +      L+ +    KMSK  G+ 
Sbjct: 253 ADVHLVGKE----IIRFHTIIWPALLMALDLPLPEKIFGHGWILFDN---DKMSKSKGNV 305

Query: 408 ITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           I    ++   G D++++ +L          F+  K  ++   +    +    +R  S+  
Sbjct: 306 IYPEPIIKLYGVDALKYFLLREFSFGSDGSFNREKFMQRLNSDLANDLGNLVSRIISMIE 365

Query: 467 QAKD-------IFPDLDFDLFPRNVIPQESEFDTSE-----------LQLIVHLAEY 505
           +  D       +  ++D DL               E             LI    +Y
Sbjct: 366 KYNDGYIPSATVSEEVDEDLINIATTTMTKVDSAMEHFEFSVALEEIWNLIRRCNKY 422


>gi|323342428|ref|ZP_08082660.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463540|gb|EFY08734.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 445

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 101/316 (31%), Gaps = 41/316 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV D L  ++   GY+V       D   +I   A              D  +
Sbjct: 36  HIGNARPIVVFDLLRRVLETLGYDVKLVSNYTDVDDKIIKKASE---------EGVDESV 86

Query: 197 PEGYYPGVYLKHVGKELADKYSSELL---NFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
               Y   Y K      AD   +        PE           +  +  +I  D  A  
Sbjct: 87  ISNRYIEAYEKVRKGLHADHVQATPKVTNTMPE----------IISFIQDLIDHDY-AYA 135

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            + D++              ++ ID L         ++     + + K +     L   +
Sbjct: 136 SKGDVYFRVSKAEEYGAISSQN-IDEL---------MVGARIEENSNKENPLDFVLWKDT 185

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAA 372
              G   D P  K  G   +    +     ++++    +I + G          E   A 
Sbjct: 186 NDNGIKWDAPWGK--GRPGWHTECVVMINNEFKQ---EIIDIHGGGQDLKFPHHENESAQ 240

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
             +     +         L  DG   KMSK  G+ +  +  +D++G ++ R++++     
Sbjct: 241 CRALHNHDLANYWVHNAMLNIDGE--KMSKSIGNVMWAQEFIDKLGENATRWLLMSTHYR 298

Query: 433 ELLDFDFCKVKEQSKE 448
             L+     V++  KE
Sbjct: 299 LTLNITEELVEQTHKE 314


>gi|253775119|ref|YP_003037950.1| valyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164183|ref|YP_003047293.1| valyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|242379778|emb|CAQ34605.1| valyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253326163|gb|ACT30765.1| valyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253976086|gb|ACT41757.1| valyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253980242|gb|ACT45912.1| valyl-tRNA synthetase [Escherichia coli BL21(DE3)]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|257417468|ref|ZP_05594462.1| cysteinyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|300862011|ref|ZP_07108091.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|257159296|gb|EEU89256.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|295112378|emb|CBL31015.1| cysteinyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848536|gb|EFK76293.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 470

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|218883858|ref|YP_002428240.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765474|gb|ACL10873.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 498

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/345 (12%), Positives = 109/345 (31%), Gaps = 42/345 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P  P H+GH    V  D LA     +G +V   +   +   +       V  +  +    
Sbjct: 8   PNAPPHIGHAYTTVFADVLARFHRLTGGKVF--FLTGN--DEHGLKIQRVAEKAGKHPKE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              ++   Y     + ++  +   + +        ++    +    +    K        
Sbjct: 64  YVDEMANLYREYWRILNISYDYFIRTTDPYHEKAVKEAFNYIYGKGLIYKAKYSGMYCVD 123

Query: 252 LNIQHD--------------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +                      ++ E+ ++         ++D L  Q  VY    
Sbjct: 124 CEKYYSPGEYTEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLDVLENQDIVYPSQY 183

Query: 292 PPPKSKTTQKCDMDR-------KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
               +   +   +         +++ +   +  DD     +  D    Y +  + Y   K
Sbjct: 184 AREVASKIRNEGLRDVSVARPVERVWWGIPVPFDDKYVIYVWFDALMNYLSG-IGYPDDK 242

Query: 345 YE--RGFDNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            +    + N+ +++G D    +     ++  A+     +  ++   L+        +K+S
Sbjct: 243 EKNTLYWSNVHHIIGKDILWFHTAVWFSMLKALDMPPPRRVIVHSYLIS-----KGLKIS 297

Query: 402 KRAGDFITLRHVVDEV-GSDSVRFMMLW-RKNSELLDFDFCKVKE 444
           K  G+ I++  +V+   GSD VR+++       +  +  F  +  
Sbjct: 298 KSIGNVISIEELVERYNGSDGVRYLLSRIFNTDKDSEVSFELLDS 342


>gi|157374333|ref|YP_001472933.1| isoleucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082334|sp|A8FSI2|SYI_SHESH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157316707|gb|ABV35805.1| isoleucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 940

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 18/192 (9%)

Query: 347 RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +G +  +Y+ GSD   G+      ++ A++ K     VL         DG   KMSK  G
Sbjct: 555 QGHEIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF---TVDGNGRKMSKSIG 611

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I  + V +++G+D +R  +     S  +     ++ ++S +        AY R R+  
Sbjct: 612 NVIAPQTVTNKLGADILRLWVAATDYSGEMTVS-DEILKRSAD--------AYRRIRNTA 662

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
           R         D    P N +    E    +  ++   A     +  A      + +   L
Sbjct: 663 RFLLANINGFD----PVNDLVAVEEMVALDRWVVRRAAALQEELIEAYEQYNFHVVTQKL 718

Query: 526 YDLAS-VFHGHW 536
               S      +
Sbjct: 719 MQFCSVELGSFY 730


>gi|220928627|ref|YP_002505536.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998955|gb|ACL75556.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 883

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 46/198 (23%), Gaps = 37/198 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    +    +            I     N TG +H+GH     + D L   
Sbjct: 12  DPGQVEDRLYKKWMDEGYFHAVPDKNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRT 71

Query: 154 MAFSGYEVTREYYINDA--GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               GY             G    ++A         A      D+               
Sbjct: 72  KRMQGYSAL-------WLPGTDHASIATEAKIVDAMAKEGISKDM----LGREKFLEKAW 120

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E    Y                           I + LK L    D          G   
Sbjct: 121 EWKKVYGGR------------------------IVEQLKKLGSSCDWERERFTMDEGLSR 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++++   L  +G +Y+G
Sbjct: 157 AVQEVFLKLYDKGLIYKG 174


>gi|24214563|ref|NP_712044.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|30316164|sp|Q8F525|SYC_LEPIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24195528|gb|AAN49062.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 471

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 65/344 (18%), Positives = 114/344 (33%), Gaps = 46/344 (13%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
              +       +V +           H+G+ R  +  D L   +   GY V     I D 
Sbjct: 13  RKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYGVDMTMNITDI 72

Query: 171 GAQINTLALSVFWRYQQALYNNDSDL--PEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
             +I         R   A   +  +   P        LK V  E+ + Y     + PE  
Sbjct: 73  DDKI--------IRDSIASKKSIIEFTAPWTKAFFEDLKTVSAEILEHYPKATDSIPE-- 122

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                    V  + K+ +  L        ++ S   F       +  I  +  + G  Y+
Sbjct: 123 --------MVDIIQKLQKKGL-VYKKDESLYFSIQKFQNY--GKLSKIDTSGMKTGTRYD 171

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                  +   +K D+    L     + G+     L+ + G   +     A  +  Y  G
Sbjct: 172 -------TDEYEKEDVRDFVLWKSPKLEGETSWDTLVGT-GRPGWHLECSAMIRKVYGSG 223

Query: 349 FDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            D  I+  G D     H   + + E      S  K  ++        L  DG   KMSK 
Sbjct: 224 VD--IHTGGVDLLFPHHENEIAQSEGAFPEESFVKTWLHSEH-----LLVDGQ--KMSKS 274

Query: 404 AGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            G+F TLR ++ + +   ++RF+++       L+F   ++ E S
Sbjct: 275 KGNFYTLRDLIQQGLDPKAIRFLLISTHYRSKLNFSTDRIAEAS 318


>gi|332749220|gb|EGJ79641.1| valyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|333009313|gb|EGK28769.1| valyl-tRNA synthetase [Shigella flexneri K-218]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|327184092|gb|AEA32539.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 804

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 113/347 (32%), Gaps = 60/347 (17%)

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           ++A   +   +   +  G+ ++   K++ D       N  E+K    ++D          
Sbjct: 366 KEAFTEDGPHINSEFLNGLNIEDAKKKMVDWLEDH--NCGEKKVNYKLRD------WDFS 417

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R           +   ED    G+ + + +  D L  +      I P    ++      D
Sbjct: 418 RQRY--WGEPIPVIHWED----GETTLVPE--DQLPLRLPHATDIKPSGTPESPLANLTD 469

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGS 358
              ++ ++   G      +    GS  Y+   +     K    +D +       +Y+ G+
Sbjct: 470 WVNVVDKNGRKGKRETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGA 529

Query: 359 DHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAGDFITL 410
           +H+     Y +    V   +     +         RLY  G+      KMSK  G+ +  
Sbjct: 530 EHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNP 584

Query: 411 RHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
             V+DE G+DS+R + M        +D+D           P               ++  
Sbjct: 585 DDVIDEYGADSLRMYEMFMGPLDASIDWD--------DNGPAST------------KKFL 624

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           D    L  +      IPQE   D ++ +L      Y   ++  T   
Sbjct: 625 DRVWRLFVNDLDLKAIPQERIVDKNDGELDKV---YAETVKKVTEDF 668


>gi|323965647|gb|EGB61101.1| valyl-tRNA synthetase [Escherichia coli M863]
 gi|327250203|gb|EGE61922.1| valyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|304438288|ref|ZP_07398229.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368654|gb|EFM22338.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 516

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 103/319 (32%), Gaps = 27/319 (8%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---VFWRYQQA 188
           P+  +H+GH  C  V DT+A     +G++V      ++ G +I   A        RY   
Sbjct: 16  PSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQAAEKEGITPIRYVDR 75

Query: 189 LYNNDSDL--PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMK 243
           +  +  +L    G     +++       +          ++  +   +    Y       
Sbjct: 76  IVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIYKGEYKGLYCTPCESY 135

Query: 244 IIRDDLKALNIQHDIF-----ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             R  L       D       +SE+ +          ++  +       + +    +   
Sbjct: 136 WTRLQLDENGCCPDCHRPVQEVSEEAYFFRMSKYADRLLAYINEHPDFIQPVSRRNEMIA 195

Query: 299 TQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCK--YERGFDN 351
             +  ++   +   S   G     D      +  D    Y    + Y   K  + + +  
Sbjct: 196 FIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLTP-IGYLHDKEMFHKYWPA 254

Query: 352 MIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            ++++G +    +      +  A+     +       L+         KMSK  G+ +  
Sbjct: 255 DVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIV-----NGAKMSKSVGNVVDP 309

Query: 411 RHVVDEVGSDSVRFMMLWR 429
             +++E G+D++R+ +L  
Sbjct: 310 VALIEEFGADAIRYFLLRE 328


>gi|300821365|ref|ZP_07101513.1| valyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|331680396|ref|ZP_08381055.1| valine--tRNA ligase [Escherichia coli H591]
 gi|300526254|gb|EFK47323.1| valyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|331071859|gb|EGI43195.1| valine--tRNA ligase [Escherichia coli H591]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|300950214|ref|ZP_07164154.1| valyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300450435|gb|EFK14055.1| valyl-tRNA synthetase [Escherichia coli MS 116-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|260450922|gb|ACX41344.1| valyl-tRNA synthetase [Escherichia coli DH1]
 gi|315138809|dbj|BAJ45968.1| valyl-tRNA synthetase [Escherichia coli DH1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|227518065|ref|ZP_03948114.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256964025|ref|ZP_05568196.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257084048|ref|ZP_05578409.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|227074501|gb|EEI12464.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256954521|gb|EEU71153.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256992078|gb|EEU79380.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 470

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|222692328|gb|ACM67032.1| arginyl tRNA synthetase [Mastigocladus laminosus W135]
 gi|222692330|gb|ACM67033.1| arginyl tRNA synthetase [Mastigocladus laminosus W156]
 gi|222692332|gb|ACM67034.1| arginyl tRNA synthetase [Mastigocladus laminosus W232]
 gi|222692334|gb|ACM67035.1| arginyl tRNA synthetase [Mastigocladus laminosus W517]
 gi|222692336|gb|ACM67036.1| arginyl tRNA synthetase [Mastigocladus laminosus W519]
          Length = 130

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KIETLANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVE 115


>gi|218556805|ref|YP_002389719.1| valyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218707864|ref|YP_002415383.1| valyl-tRNA synthetase [Escherichia coli UMN026]
 gi|260847089|ref|YP_003224867.1| valyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|293402883|ref|ZP_06646980.1| valyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298378409|ref|ZP_06988293.1| valyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300899407|ref|ZP_07117662.1| valyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|307312967|ref|ZP_07592595.1| valyl-tRNA synthetase [Escherichia coli W]
 gi|331671399|ref|ZP_08372197.1| valine--tRNA ligase [Escherichia coli TA280]
 gi|218363574|emb|CAR01231.1| valyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218434961|emb|CAR15902.1| valyl-tRNA synthetase [Escherichia coli UMN026]
 gi|257762236|dbj|BAI33733.1| valyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|291429798|gb|EFF02812.1| valyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298280743|gb|EFI22244.1| valyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300356985|gb|EFJ72855.1| valyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|306907135|gb|EFN37642.1| valyl-tRNA synthetase [Escherichia coli W]
 gi|315063565|gb|ADT77892.1| valyl-tRNA synthetase [Escherichia coli W]
 gi|320200612|gb|EFW75198.1| Valyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323380355|gb|ADX52623.1| valyl-tRNA synthetase [Escherichia coli KO11]
 gi|323940176|gb|EGB36370.1| valyl-tRNA synthetase [Escherichia coli E482]
 gi|331071244|gb|EGI42601.1| valine--tRNA ligase [Escherichia coli TA280]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|203284634|ref|YP_002222374.1| valyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201084077|gb|ACH93668.1| valyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 877

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 65/215 (30%), Gaps = 36/215 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +    +    +  +   +     +     N TG +H+GH     + D L   
Sbjct: 10  DPKVFEDKIYKRWLDNGVFSPDDKIELKFSMVA-PPPNVTGILHMGHALNFTLQDILVRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKE 212
               G+     +  + AG        +VF +  + L  +  D   E +  G++      E
Sbjct: 69  KRMKGFNTLWLFGTDHAG----IATQTVFEKQLRELGKSKDDFSREEFIEGIF------E 118

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           L +K+                         KII + ++ L   +D          G    
Sbjct: 119 LKNKHR------------------------KIIVNQVEKLGASYDHLRERFTLDDGLSRA 154

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +  +  +L  +G +Y+G         +     D +
Sbjct: 155 VNKVFIDLYNKGLIYKGEYLVNLDPGSGSVVSDEE 189


>gi|187931314|ref|YP_001891298.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254782406|sp|B2SF88|SYI_FRATM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187712223|gb|ACD30520.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 935

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 39/250 (15%)

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS----------DGSYTYFAADLAYFKCKYE 346
           K  +K + D  +  F +       +    KS           GS +    DL     +  
Sbjct: 494 KVAEKIEKDGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDL---DKRLS 550

Query: 347 RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              D  +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G
Sbjct: 551 YPAD--LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLG 605

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +  + + + + +G+D +R           +     ++ +++ +             R + 
Sbjct: 606 NVTSPQDIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLR 653

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             A+ +  +LD      ++I  +      +  +     E+   I  A    + + +    
Sbjct: 654 NTARFLLSNLDGFNPVTDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTV---- 708

Query: 526 YDLASVFHGH 535
              A + H  
Sbjct: 709 ---AQLIHHF 715


>gi|172039171|ref|YP_001805672.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700625|gb|ACB53606.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 909

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P            +   +  +   +G   +I     N TG +H+GH     + D L   
Sbjct: 15  DPKTTESKWQDAWETHQVFKADNSKEGETYSIVIPPPNVTGSLHMGHAFEDCLMDVLVRY 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                             L    +D        V  + +  E 
Sbjct: 75  HRMCGYNT---------------------------LCLPGTDHASIAVHTVLDRQLKAEG 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y     +   EK+L    ++  ++  KI+   LK + +  D          G    +
Sbjct: 108 ITRY-----DIGREKFLEKAWEWKQESGGKIVNQ-LKKMGLSADWSRERFTLDEGLSKAV 161

Query: 274 RDIIDNLARQGYVYEG 289
           R     L   G +Y G
Sbjct: 162 RTAFVKLYEAGLIYRG 177



 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 103/293 (35%), Gaps = 34/293 (11%)

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           NF  E+W  + +D+ V+     I   L     Q   +    + +         I+ +  +
Sbjct: 388 NFVPERWKKVYRDWLVKLKDWCISRQLW-WGHQIPAWYVISETNGEITDNTPFIVAHSEQ 446

Query: 283 QGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +             +  Q  D+        L   ST+   D  + L       TY     
Sbjct: 447 EALEKAKKDYGDTIQLEQDPDVLDTWFSSGLWPFSTLGWPDNTQDLK------TY----- 495

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
            Y       GFD +I+         V R+  +A   ++K    +V +  LV   RD    
Sbjct: 496 -YPTSTLVTGFD-IIFFW-------VARMTMMAGYFTDKMPFQDVYIHGLV---RDENGK 543

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK + + I    ++++ G+D++R+ ++        D      ++  +   V     + 
Sbjct: 544 KMSKSSNNGIDPLILIEKYGTDALRYTLIKEVAGAGQDISLQYDRKTDESESVEA---SR 600

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                ++  A+ +   L  +       P+  + + S+  +   L+ + + ++ 
Sbjct: 601 NFANKLWNAARFVMMHLKGETPQSLGTPEIDKLELSDRWI---LSRFHQTVQQ 650


>gi|170767152|ref|ZP_02901605.1| valyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170124590|gb|EDS93521.1| valyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|537100|gb|AAA97155.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|26251166|ref|NP_757206.1| valyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218702961|ref|YP_002410590.1| valyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227886688|ref|ZP_04004493.1| valyl-tRNA synthetase [Escherichia coli 83972]
 gi|300972383|ref|ZP_07171916.1| valyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050056|ref|ZP_07196968.1| valyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|81472723|sp|Q8FAD1|SYV_ECOL6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|26111598|gb|AAN83780.1|AE016771_291 Valyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218372947|emb|CAR20828.1| valyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227836261|gb|EEJ46727.1| valyl-tRNA synthetase [Escherichia coli 83972]
 gi|300298214|gb|EFJ54599.1| valyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300410962|gb|EFJ94500.1| valyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307556428|gb|ADN49203.1| valyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|315293631|gb|EFU52983.1| valyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|157158681|ref|YP_001465766.1| valyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157080711|gb|ABV20419.1| valyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|194426565|ref|ZP_03059119.1| valyl-tRNA synthetase [Escherichia coli B171]
 gi|194415304|gb|EDX31572.1| valyl-tRNA synthetase [Escherichia coli B171]
 gi|323162056|gb|EFZ47928.1| valyl-tRNA synthetase [Escherichia coli E128010]
 gi|332346336|gb|AEE59670.1| valyl-tRNA synthetase ValS [Escherichia coli UMNK88]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|15804850|ref|NP_290891.1| valyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15834489|ref|NP_313262.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|74314737|ref|YP_313156.1| valyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82546489|ref|YP_410436.1| valyl-tRNA synthetase [Shigella boydii Sb227]
 gi|168751049|ref|ZP_02776071.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168754838|ref|ZP_02779845.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168760511|ref|ZP_02785518.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168766547|ref|ZP_02791554.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168774022|ref|ZP_02799029.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168782783|ref|ZP_02807790.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168784906|ref|ZP_02809913.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168797836|ref|ZP_02822843.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|191167229|ref|ZP_03029047.1| valyl-tRNA synthetase [Escherichia coli B7A]
 gi|194437742|ref|ZP_03069837.1| valyl-tRNA synthetase [Escherichia coli 101-1]
 gi|195937283|ref|ZP_03082665.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208807261|ref|ZP_03249598.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812419|ref|ZP_03253748.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821133|ref|ZP_03261453.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209400172|ref|YP_002273802.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217326158|ref|ZP_03442242.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254796278|ref|YP_003081115.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256025194|ref|ZP_05439059.1| valyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260858410|ref|YP_003232301.1| valyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|261225377|ref|ZP_05939658.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255370|ref|ZP_05947903.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291285670|ref|YP_003502488.1| Valyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|300923935|ref|ZP_07139945.1| valyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301329236|ref|ZP_07222217.1| valyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|331671166|ref|ZP_08371999.1| valine--tRNA ligase [Escherichia coli TA271]
 gi|81765824|sp|Q8XCB3|SYV_ECO57 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|90108435|sp|Q31TK0|SYV_SHIBS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|90108437|sp|Q3YU91|SYV_SHISS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12519267|gb|AAG59457.1|AE005657_17 valine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13364713|dbj|BAB38658.1| valine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73858214|gb|AAZ90921.1| valine tRNA synthetase [Shigella sonnei Ss046]
 gi|81247900|gb|ABB68608.1| valine tRNA synthetase [Shigella boydii Sb227]
 gi|187770264|gb|EDU34108.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014833|gb|EDU52955.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999737|gb|EDU68723.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189357851|gb|EDU76270.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189364116|gb|EDU82535.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189368969|gb|EDU87385.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189374851|gb|EDU93267.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189379536|gb|EDU97952.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|190902682|gb|EDV62413.1| valyl-tRNA synthetase [Escherichia coli B7A]
 gi|194423238|gb|EDX39230.1| valyl-tRNA synthetase [Escherichia coli 101-1]
 gi|208727062|gb|EDZ76663.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733696|gb|EDZ82383.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741256|gb|EDZ88938.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209161572|gb|ACI39005.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209749478|gb|ACI73046.1| valine tRNA synthetase [Escherichia coli]
 gi|209749480|gb|ACI73047.1| valine tRNA synthetase [Escherichia coli]
 gi|209749482|gb|ACI73048.1| valine tRNA synthetase [Escherichia coli]
 gi|209749484|gb|ACI73049.1| valine tRNA synthetase [Escherichia coli]
 gi|209749486|gb|ACI73050.1| valine tRNA synthetase [Escherichia coli]
 gi|217322379|gb|EEC30803.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254595678|gb|ACT75039.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257757059|dbj|BAI28561.1| valyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|290765543|gb|ADD59504.1| Valyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|300419813|gb|EFK03124.1| valyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300844444|gb|EFK72204.1| valyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|320177614|gb|EFW52604.1| Valyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320184514|gb|EFW59316.1| Valyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320639015|gb|EFX08661.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644385|gb|EFX13450.1| valyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649702|gb|EFX18226.1| valyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320655099|gb|EFX23060.1| valyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660605|gb|EFX28066.1| valyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665532|gb|EFX32578.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323157534|gb|EFZ43643.1| valyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323171703|gb|EFZ57349.1| valyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323935380|gb|EGB31728.1| valyl-tRNA synthetase [Escherichia coli E1520]
 gi|323970488|gb|EGB65747.1| valyl-tRNA synthetase [Escherichia coli TA007]
 gi|326345409|gb|EGD69152.1| Valyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346735|gb|EGD70469.1| Valyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|331061755|gb|EGI33681.1| valine--tRNA ligase [Escherichia coli TA271]
 gi|332087225|gb|EGI92359.1| valyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|333011247|gb|EGK30661.1| valyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333012144|gb|EGK31526.1| valyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|324112118|gb|EGC06096.1| valyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|320174754|gb|EFW49883.1| Valyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|331681278|ref|ZP_08381915.1| valine--tRNA ligase [Escherichia coli H299]
 gi|331081499|gb|EGI52660.1| valine--tRNA ligase [Escherichia coli H299]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|331656092|ref|ZP_08357080.1| valine--tRNA ligase [Escherichia coli M718]
 gi|331046446|gb|EGI18536.1| valine--tRNA ligase [Escherichia coli M718]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|307274057|ref|ZP_07555267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306509365|gb|EFM78425.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 478

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|300935929|ref|ZP_07150883.1| valyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458897|gb|EFK22390.1| valyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|301028095|ref|ZP_07191373.1| valyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299878812|gb|EFI87023.1| valyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|270016168|gb|EFA12616.1| hypothetical protein TcasGA2_TC006857 [Tribolium castaneum]
          Length = 1047

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 63/219 (28%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP ++     S          EYGR          K  I     N TG +H+GH     +
Sbjct: 86  SPQFVEAAWYSWWEKQGFFKPEYGRKSIAEPNPRGKFVIVIPPPNVTGSLHLGHALTNAI 145

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D++       G         + AG     +     WR ++   ++              
Sbjct: 146 QDSIVRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRNEKKTRHDIGR----------- 194

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                   + + S++  + EEK   I                LK L    D   ++   +
Sbjct: 195 --------EGFISKVWEWKEEKGDRIYHQ-------------LKKLGSSFDWDRAQFTMN 233

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +GY+Y        S T +    D
Sbjct: 234 PRLSRAVTEAFVRLHEEGYIYRANRLVNWSCTLKSAISD 272


>gi|256618484|ref|ZP_05475330.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256598011|gb|EEU17187.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
          Length = 470

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKTFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|222086010|ref|YP_002544542.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723458|gb|ACM26614.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 517

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 105/328 (32%), Gaps = 41/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q+    
Sbjct: 16  PNGKPHIGHAYELIATDAMARFQRLDGRDVFFLTGTDEHGQKMQQTARAEGLSPQELADR 75

Query: 192 NDSDLPEGYY-----PGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N ++              Y++   +   +   +      +   +             +A 
Sbjct: 76  NSAEFQAMGKLLNSSNDDYIRTTEERHHETSRNIWNLMADAGDIYKDSYAGWYSVRDEAY 135

Query: 242 MKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +    +L+A  +++        ++ E+ +        +D +  L  +   + G      
Sbjct: 136 YQENETELRADGVRYGPQGTPVEWVQEESYFFKLSE-YQDRLLKLYEENPDFIGPAERRN 194

Query: 296 SKTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE--- 346
              +      +   + R+T      +  D      +  D    Y  A   Y + +     
Sbjct: 195 EVISFVKSGLKDLSISRTTFDWGIKVPNDPAHVMYVWVDALTNYITA-TGYIEDRNNPRA 253

Query: 347 --RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                D  ++++G D    + R  AV   A  +S K      +      L +     KMS
Sbjct: 254 KYWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG---EKMS 304

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +   ++V+  G D VR+  L  
Sbjct: 305 KSLGNVVDPVNLVNHFGLDQVRYFFLRE 332


>gi|218561416|ref|YP_002394329.1| valyl-tRNA synthetase [Escherichia coli S88]
 gi|218368185|emb|CAR05993.1| valyl-tRNA synthetase [Escherichia coli S88]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|149378126|ref|ZP_01895845.1| valyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357571|gb|EDM46074.1| valyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 956

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 62/212 (29%), Gaps = 35/212 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           R+   +    G    R+   +G      +I     N TG +H+GH     + DTL     
Sbjct: 12  RQWYENWESKGYFRPRSEKAEGGEGESFSIAIPPPNVTGSLHMGHAFQHTIMDTLTRFKR 71

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G     +   + AG     +                               V ++LA 
Sbjct: 72  MQGRNALWQVGTDHAGIATQMV-------------------------------VERKLAA 100

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +      +   E+++  + D+  Q+    I   ++ L    D          G    +++
Sbjct: 101 EEDKTRHDLGREEFIKRIWDWKTQSG-GTITGQIRRLGNSVDWDHERFTMDDGFYKAVQE 159

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +   L  +G VY G               D +
Sbjct: 160 VFIRLYDEGLVYRGKRLVNWDPKLHTAISDLE 191


>gi|91094005|ref|XP_971250.1| PREDICTED: similar to Valyl-tRNA synthetase CG4062-PA [Tribolium
           castaneum]
          Length = 1046

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 63/219 (28%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP ++     S          EYGR          K  I     N TG +H+GH     +
Sbjct: 85  SPQFVEAAWYSWWEKQGFFKPEYGRKSIAEPNPRGKFVIVIPPPNVTGSLHLGHALTNAI 144

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D++       G         + AG     +     WR ++   ++              
Sbjct: 145 QDSIVRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRNEKKTRHDIGR----------- 193

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                   + + S++  + EEK   I                LK L    D   ++   +
Sbjct: 194 --------EGFISKVWEWKEEKGDRIYHQ-------------LKKLGSSFDWDRAQFTMN 232

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +GY+Y        S T +    D
Sbjct: 233 PRLSRAVTEAFVRLHEEGYIYRANRLVNWSCTLKSAISD 271


>gi|194433888|ref|ZP_03066161.1| valyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417869|gb|EDX33965.1| valyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|332083726|gb|EGI88944.1| valyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|300916353|ref|ZP_07133096.1| valyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|307140953|ref|ZP_07500309.1| valyl-tRNA synthetase [Escherichia coli H736]
 gi|331645007|ref|ZP_08346124.1| valine--tRNA ligase [Escherichia coli H736]
 gi|300416332|gb|EFJ99642.1| valyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|331035982|gb|EGI08220.1| valine--tRNA ligase [Escherichia coli H736]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|301024409|ref|ZP_07188095.1| valyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300396604|gb|EFJ80142.1| valyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|300957120|ref|ZP_07169361.1| valyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300316138|gb|EFJ65922.1| valyl-tRNA synthetase [Escherichia coli MS 175-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|293407978|ref|ZP_06651818.1| valyl-tRNA synthetase [Escherichia coli B354]
 gi|291472229|gb|EFF14711.1| valyl-tRNA synthetase [Escherichia coli B354]
          Length = 954

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 7   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 67  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 96  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 155 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 212

Query: 332 TYFAAD 337
           T    D
Sbjct: 213 TADGKD 218


>gi|293417757|ref|ZP_06660379.1| valyl-tRNA synthetase [Escherichia coli B185]
 gi|291430475|gb|EFF03473.1| valyl-tRNA synthetase [Escherichia coli B185]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|270291812|ref|ZP_06198028.1| glutamate--tRNA ligase [Streptococcus sp. M143]
 gi|270279897|gb|EFA25738.1| glutamate--tRNA ligase [Streptococcus sp. M143]
          Length = 486

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++      +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSQEEK------AAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|221118664|ref|XP_002163373.1| PREDICTED: similar to LOC100037020 protein [Hydra magnipapillata]
          Length = 525

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 58/149 (38%), Gaps = 27/149 (18%)

Query: 453 YVQYAYARCRSIFRQAKDIF------PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           ++ Y YAR   + +  +++       P ++       V+  +     SE  L++++ +Y 
Sbjct: 388 FIMYNYARICKLLKTHQELVTQGVYPPIMEISNMDFTVLSLQ-----SEWCLVLYILDYC 442

Query: 507 RVIENATIAQ-------EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL---T 556
            ++ N            + +++  +LY L+     ++       + + +  +   L    
Sbjct: 443 ILLSNLKSKFYSKMSDVDAHQIYKFLYYLSRDISSYYH------QTKILLESRDHLFGLI 496

Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585
             RL L  A+  I+     ++ V  P EM
Sbjct: 497 SARLYLSVALKEIMEHSFRLLDVNPPQEM 525


>gi|218692645|ref|YP_002400857.1| valyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218430209|emb|CAR11066.1| valyl-tRNA synthetase [Escherichia coli ED1a]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|148887059|sp|Q4AAJ3|SYE_MYCHJ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|144227483|gb|AAZ44228.2| glutamyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 467

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 96/306 (31%), Gaps = 46/306 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         ++       +QI  L  
Sbjct: 8   APSPTGFLHIGGARTALFNYLFAKHHNGDFILRIEDSDNSRNIKD----GEKSQIENLLW 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++               G Y +    E   K + EL+           K ++  
Sbjct: 64  LGIIPDEKPGSETK--------FGPYRQSEKLERYQKLAQELIK----------KGFAYY 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A     +++LK    +          +  +   I D       +   +       K+K  
Sbjct: 106 AFDN--QEELKLQKKEQIAKGIFSFRYDQNWLKISDQEKQKRLKNKHFVIRFKVDKAKNF 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q+ F  + + D     ++KSDG  TY   + A     ++    ++    G +
Sbjct: 164 CWNDLVRGQICFEGSAISDW---VIIKSDGFPTY---NFAVVVDDFDMEISHI--FRGEE 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A + K  +        + +  D    K+SKR  +           G 
Sbjct: 216 HISNTPKQIGIYQAFNWKTPKFGH-----LTIITDKNGKKLSKRDKNLFQFIEDYKNQGY 270

Query: 420 DSVRFM 425
            S  F 
Sbjct: 271 HSEAFF 276


>gi|193069848|ref|ZP_03050798.1| valyl-tRNA synthetase [Escherichia coli E110019]
 gi|192956902|gb|EDV87355.1| valyl-tRNA synthetase [Escherichia coli E110019]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|332083258|gb|EGI88489.1| valyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|325499816|gb|EGC97675.1| valyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|323189861|gb|EFZ75139.1| valyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|300928083|ref|ZP_07143631.1| valyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300463880|gb|EFK27373.1| valyl-tRNA synthetase [Escherichia coli MS 187-1]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|312115063|ref|YP_004012659.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220192|gb|ADP71560.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 523

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 95/329 (28%), Gaps = 43/329 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   AV  D +A      G+ V     +++ G ++   A        +    
Sbjct: 18  PNGEPHIGHAYEAVATDAMARFKRLDGHPVFFLTGVDEHGLKMKQTAAKEGITPTELADR 77

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N +   E           +++       +  +       +   + +           +A 
Sbjct: 78  NTAKFIEMLEQLDVSYDDFIRTTEPRHHESVAEIWRRMEKAGDIYLAGYKGWYSVRDEAF 137

Query: 242 MKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  L    I+         +  E  +        + ++           G + P +
Sbjct: 138 YAESETVLGGNGIRLGPQGTPVEWTEEQTYFFRLSKYEKKLLKFYEEN----PGFIMPAE 193

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM--- 352
            +      +         +    D   P+  + G   Y   D A        GF  +   
Sbjct: 194 RRNEVVSFVKGGLQDLSISRTTLDWGIPVPDAPGHIIYVWVD-ALTNYITAAGFPKIRSK 252

Query: 353 ---------IYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                    ++++G D    + R  AV   A  +S K      +        R     KM
Sbjct: 253 AWKERWPAQVHIIGKD----ITRFHAVYWPAFLMSAKLPLPERVFGHGFLYNRG---EKM 305

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           SK  G+ +  + +VD  G D VR+  L  
Sbjct: 306 SKSVGNVVAPKDLVDAYGVDQVRYYFLRE 334


>gi|260871010|ref|YP_003237412.1| valyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257767366|dbj|BAI38861.1| valyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323176172|gb|EFZ61764.1| valyl-tRNA synthetase [Escherichia coli 1180]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|170743946|ref|YP_001772601.1| valyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198220|gb|ACA20167.1| valyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 903

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 70/253 (27%), Gaps = 34/253 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +++       +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFDPAAVEARIAAEWEEAQAFRAGRPDRADAAPYSIMIPPPNVTGSLHMGHALNNTLQDV 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA      G +V  +   + AG     +                               V
Sbjct: 65  LARFERLRGKDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA+    +       +++  V  +  ++    I + LK L    D          G 
Sbjct: 94  ERRLAEHQQPDRRALGRAEFVRRVWAWKAESG-GTIVNQLKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +  +L   G +Y            Q    D +               P++  +G
Sbjct: 153 SKAVVKVFVDLHAAGLIYRDKRLVNWDPRFQTAISDLEVQQVEVKGHLWHFAYPVVDQEG 212

Query: 330 SYTYFAADLAYFK 342
             T     +A  +
Sbjct: 213 RETGETITVATTR 225



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +        +     A+ E   +   +      L RD    KMSK  G+
Sbjct: 507 TGFD-IIFFWVAR------MMMMGLHALGEVPFRTVYIHA----LVRDEKGAKMSKSKGN 555

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    +VD  G+D++RF +
Sbjct: 556 VVDPLDLVDRYGADALRFTL 575


>gi|167747813|ref|ZP_02419940.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662]
 gi|167653175|gb|EDR97304.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662]
          Length = 648

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 53/411 (12%), Positives = 128/411 (31%), Gaps = 62/411 (15%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    ++ D++A      GY+V  +   ++ G ++   A       ++ + + 
Sbjct: 16  SGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAAEKGVTPKEFVDDV 75

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             ++         +  +     DK+        E +   I K    Q    I +   + L
Sbjct: 76  AGEIK-------RIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYEQG--DIYKGHYEGL 126

Query: 253 NIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
                + F +E     G        +     + Y  +      +         +  Q   
Sbjct: 127 YCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFLKLSKYADRLIDYINAHPEFIQPES 186

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM--------- 356
           R   + ++   P             DL   +  ++ G    FD  +++YV          
Sbjct: 187 RKNEMMNNFLLP----------GLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYIT 236

Query: 357 -------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-------------- 395
                  G+    + K   A    + +   + + +   ++ +  D               
Sbjct: 237 GIGYDCDGNSTDQFKKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQ 296

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-DFDFCKVKEQSKENPVFYV 454
              KMSK  G+ +    + +    D+VR+ +L     E      +  + E+   +    +
Sbjct: 297 GDGKMSKSKGNVLYADDLAEMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTL 356

Query: 455 QYAYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
                R  S+  +      +D   + +FD   + V+    +    ++ ++ 
Sbjct: 357 GNLVNRTISMSNKYFDGVVEDKGVEDEFDDQLKAVVTGARDKVQKKMDVLK 407


>gi|254302263|ref|ZP_04969621.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322455|gb|EDK87705.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 887

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 83/267 (31%), Gaps = 40/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + +    I      +  +L  +    +I     N TG +H+GH     + DTL   
Sbjct: 9   SPNEIEEKWYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTL--- 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +    N   +P   + G+  ++  +  
Sbjct: 66  -----------------------------IRYNRMTGKNTLWMPGCDHAGIATQNKVERK 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +   +  +   EK+L +  D+  +    II   L+ L    D          G    +
Sbjct: 97  LAEDGLKKEDIGREKFLEMTWDWK-EKYGGIITKQLRKLGASLDWDRERFTMDEGLSYAV 155

Query: 274 RDIIDNLARQGYVYEGILPPP------KSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLK 326
           R I ++L   G +Y+G            +    + D + K            D +  ++ 
Sbjct: 156 RKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSNEYIII 215

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + ++I
Sbjct: 216 ATSRPETMLGDVAVAVHPEDERYKHLI 242



 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 79/231 (34%), Gaps = 33/231 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGM-YELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            E G D++RF M++   S+  D  F         N  F  +   A    I          
Sbjct: 544 KEFGVDAIRFSMIY-NTSQGQDVHFSTDLLGMGRN--FANKIWNAARFVIMNLEGFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           +D       ++ +   S  + +   +   L ++   ++NA  A         +Y+ L   
Sbjct: 601 VDKTKLDYELVDKWIISRLNETAKDVKDCLEKFE--LDNAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS-----IINSGLNII 577
           F   +    E  ++R    +  K      ++    A      I+  GL ++
Sbjct: 650 FCDWY---VEIAKIRLYNDDEDK------KISKLTAQYMLWTILEQGLRLL 691


>gi|92115730|ref|YP_575459.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|122990360|sp|Q1QRZ8|SYL_NITHX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91798624|gb|ABE60999.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 878

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +  ++     I   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 8   ARDAEPRWQAAWDQQAIFATKNDDPREKYYVLEMF-PYPSGRIHIGHVRNYTLGDVIARY 66

Query: 154 MAFSGYEV 161
           M   GY V
Sbjct: 67  MRAKGYNV 74


>gi|326567377|gb|EGE17492.1| valyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 975

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVRLYDEGLIYRG 177


>gi|330844840|ref|XP_003294319.1| hypothetical protein DICPUDRAFT_58973 [Dictyostelium purpureum]
 gi|325075238|gb|EGC29152.1| hypothetical protein DICPUDRAFT_58973 [Dictyostelium purpureum]
          Length = 557

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 114/329 (34%), Gaps = 48/329 (14%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV- 146
           F N  L+  Y R   S    +     +    +  K+ + + + +PTG +H+G  R A+  
Sbjct: 23  FNNSVLNQQY-RYHSSCCGHNNSNNSQLKTNEENKIRVRY-APSPTGYLHLGGLRTALFN 80

Query: 147 --------GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
                   G  L  +      +  R  ++  +      LA  + W      Y+   + P 
Sbjct: 81  YLFAKKNNGTFLLRI-----EDTDRTRFVEGSAK---NLANCLEW--AGIPYDEGPERPG 130

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
               G Y++     +  +++  LL            D           + L    I    
Sbjct: 131 NC--GPYVQSERLPIYKEHAQRLL------------DEGHAYHCFCTPERLAISRIGSKG 176

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
                 + R      ++ I+N  +    +   L  P  KTT   D+ + ++ F + ++  
Sbjct: 177 QNGMSLYDRHCLKLSKEEIENRLKNNEPHTIRLKIPSEKTTNFTDIVKGKVSFNNQLID- 235

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378
             D+ L+KSDG  TY    LA     +  G  ++I   G +      +   +  A   + 
Sbjct: 236 --DQVLMKSDGFPTYH---LASVVDDHLMGITHVIR--GEEWLNSTPKHIVLYEAFGWQP 288

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            ++       V L  +    K+SKR GD 
Sbjct: 289 PKMAH-----VPLLLNTDKSKLSKRQGDV 312


>gi|320538067|ref|ZP_08037966.1| valyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145076|gb|EFW36793.1| valyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 900

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 54/195 (27%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I       G               +     N TG +H+GH     + D +    
Sbjct: 17  KDFEDRIYEQWESQGCFKPVKRSDTKENYVVVIPPPNVTGVLHMGHGLNNTLQDIVVR-- 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                         Y +   +    +P   + G+  ++V +   
Sbjct: 75  ------------------------------YHRMKGDETLWVPGTDHAGIATQNVVERQL 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   E++L         A   II + LK +    D          G  + +R
Sbjct: 105 KKEGRSRHDLTREEFLQRTWQVK-DAHHAIIVNQLKKIGASADWSRERFTLDEGLSAAVR 163

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +G +Y G
Sbjct: 164 EVFVTLYERGLLYRG 178


>gi|309792899|ref|ZP_07687327.1| valyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|308123185|gb|EFO60447.1| valyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|306815524|ref|ZP_07449673.1| valyl-tRNA synthetase [Escherichia coli NC101]
 gi|305851186|gb|EFM51641.1| valyl-tRNA synthetase [Escherichia coli NC101]
 gi|320193624|gb|EFW68259.1| Valyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|324005159|gb|EGB74378.1| valyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|301643395|ref|ZP_07243445.1| valyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|301078225|gb|EFK93031.1| valyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|323945991|gb|EGB42029.1| valyl-tRNA synthetase [Escherichia coli H120]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|237734916|ref|ZP_04565397.1| glutamyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382244|gb|EEO32335.1| glutamyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 300

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 103/302 (34%), Gaps = 65/302 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G+ R A+ G  +A       ++     +  RE            + +   
Sbjct: 19  APSPTGYMHIGNLRTALYGYLIAKKDDGDFILRIEDTDQAREV--------AGAIDVIYQ 70

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L  ++    +G Y G Y++    E+  KY+ EL+      +      +  Q  +
Sbjct: 71  TLSDTGLEYDEGPDKDGGY-GPYIQSQRLEIYQKYAHELVKLNGAHYC-----FCNQENV 124

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  ++D +           E+             I+ L  +   Y       + +TT   
Sbjct: 125 KGNKED-QIFKDPCHQLSDEE-------------IEKLLSENKPYVIRQTIKQGQTTFND 170

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-- 360
           ++  +  +   T+     +  LLKSDG  TY               F N+I     DH  
Sbjct: 171 EVYGEITVDNDTLD----EGVLLKSDGYPTY--------------NFANIID----DHLM 208

Query: 361 -SGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
              +V R     A+     +  +     +     V         K+SKR GD  + + ++
Sbjct: 209 SITHVVRGNEYLASTPKYNIIYQTFNWEIPTYIHVPPVMKDEQHKLSKRNGDA-SYQDLI 267

Query: 415 DE 416
            +
Sbjct: 268 KQ 269


>gi|218551554|ref|YP_002385346.1| valyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218359096|emb|CAQ91757.1| valyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|218698006|ref|YP_002405673.1| valyl-tRNA synthetase [Escherichia coli 55989]
 gi|218354738|emb|CAV01799.1| valyl-tRNA synthetase [Escherichia coli 55989]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|209885212|ref|YP_002289069.1| valyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873408|gb|ACI93204.1| valyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 956

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 32/186 (17%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
                  + GR    +     I     N TG +H+GH     + D L       G +V  
Sbjct: 19  WDAAEAFKAGRPERREAEPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLW 78

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           +   + AG     +                               V ++LA +       
Sbjct: 79  QPGTDHAGIATQMV-------------------------------VERQLAARKEPTRRE 107

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
              E +L  V  +  ++    I + LK L    D          G    +  +   L  +
Sbjct: 108 MGREAFLDRVWQWKAESG-DTIVNQLKRLGASCDWSRERFTMDEGLSRAVAKVFCTLYAE 166

Query: 284 GYVYEG 289
           G +Y+ 
Sbjct: 167 GLIYKD 172



 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 87/278 (31%), Gaps = 50/278 (17%)

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYL------------KHVGKELADKYSSELL 222
             +A      Y + +  N   +P G   GV +            K +         +   
Sbjct: 345 EIVARLEQQGYLEKIEPNTHMVPHGDRSGVVIEPFLTDQWYVDAKTLAAPAIAAVRNGET 404

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDN 279
           +F  + W     ++        I   L     Q   +   D        +   +   +  
Sbjct: 405 SFVPKNWEKTYFEWMENIQPWCISRQLW-WGHQIPAWYGPDGKVFVAETEEEAVGKALAY 463

Query: 280 LARQGYV-----YEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSD 328
              +G +     ++  + P K       D D     F S      T+   D D+ + +  
Sbjct: 464 YLEEGVIDDDQAHDMAVDPAKRDEFITRDEDVLDTWFSSALWPFSTLGWPDTDKEVKR-- 521

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
               Y  + L         GFD +I+         V R+  +            V +  L
Sbjct: 522 ---YYPTSVLVT-------GFD-IIFFW-------VARMMMMGLHFMNDVPFPTVYIHAL 563

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           V   RD    KMSK  G+ I   H++DE G+D++RF +
Sbjct: 564 V---RDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTL 598


>gi|216263468|ref|ZP_03435463.1| valyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980312|gb|EEC21133.1| valyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 875

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 66/213 (30%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYNKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDILVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  + +D     Y    L     +L 
Sbjct: 70  RMKKHNTLWLFGTDHAG----IATQAVFERHLKNIGKSKND-----YEREELVQEIFKLK 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK+   ++N                         +K L   +D               + 
Sbjct: 121 DKHRGVIVNQ------------------------IKKLGASYDHTRERFTLDDSLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|104783415|ref|YP_609913.1| valyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|95112402|emb|CAK17129.1| valyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 948

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L                               V ++L 
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQML-------------------------------VERQLE 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   +K+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  AK-GQNRHDLGRDKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|91213813|ref|YP_543799.1| valyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110644617|ref|YP_672347.1| valyl-tRNA synthetase [Escherichia coli 536]
 gi|117626602|ref|YP_859925.1| valyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|215489600|ref|YP_002332031.1| valyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|237703933|ref|ZP_04534414.1| valyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|331650391|ref|ZP_08351463.1| valine--tRNA ligase [Escherichia coli M605]
 gi|331660839|ref|ZP_08361771.1| valine--tRNA ligase [Escherichia coli TA206]
 gi|91075387|gb|ABE10268.1| valyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110346209|gb|ABG72446.1| valyl-tRNA synthetase [Escherichia coli 536]
 gi|115515726|gb|ABJ03801.1| valyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|215267672|emb|CAS12130.1| valyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|222036030|emb|CAP78775.1| Valyl-tRNA synthetase [Escherichia coli LF82]
 gi|226901845|gb|EEH88104.1| valyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|281181356|dbj|BAI57686.1| valyl-tRNA synthetase [Escherichia coli SE15]
 gi|294493544|gb|ADE92300.1| valyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307629334|gb|ADN73638.1| valyl-tRNA synthetase [Escherichia coli UM146]
 gi|312948911|gb|ADR29738.1| valyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315298974|gb|EFU58228.1| valyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323950673|gb|EGB46551.1| valyl-tRNA synthetase [Escherichia coli H252]
 gi|323955544|gb|EGB51308.1| valyl-tRNA synthetase [Escherichia coli H263]
 gi|324013722|gb|EGB82941.1| valyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331040785|gb|EGI12943.1| valine--tRNA ligase [Escherichia coli M605]
 gi|331051881|gb|EGI23920.1| valine--tRNA ligase [Escherichia coli TA206]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|43302|emb|CAA29322.1| unnamed protein product [Escherichia coli K-12]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|24115433|ref|NP_709943.1| valyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30065455|ref|NP_839626.1| valyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|81722731|sp|Q83IM5|SYV_SHIFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24054748|gb|AAN45650.1| valine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30043719|gb|AAP19438.1| valine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|281603543|gb|ADA76527.1| Valyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313646458|gb|EFS10920.1| valyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332748945|gb|EGJ79368.1| valyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332763118|gb|EGJ93361.1| valyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333010226|gb|EGK29659.1| valyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333011973|gb|EGK31358.1| valyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|148251789|ref|YP_001236374.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166230612|sp|A5E8H4|SYL_BRASB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146403962|gb|ABQ32468.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 874

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +         I   +N   +     +E     P+G +H+GH R   +GD LA  
Sbjct: 8   AREAEPRWQRQWDEKAIFATKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYTLGDVLARF 66

Query: 154 MAFSGYEV 161
           M   G+ V
Sbjct: 67  MRAKGFNV 74


>gi|193063629|ref|ZP_03044717.1| valyl-tRNA synthetase [Escherichia coli E22]
 gi|192930616|gb|EDV83222.1| valyl-tRNA synthetase [Escherichia coli E22]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|187733491|ref|YP_001882958.1| valyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187430483|gb|ACD09757.1| valyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|16132080|ref|NP_418679.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89110974|ref|AP_004754.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157163733|ref|YP_001461051.1| valyl-tRNA synthetase [Escherichia coli HS]
 gi|170083697|ref|YP_001733017.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683054|ref|YP_001746661.1| valyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188494411|ref|ZP_03001681.1| valyl-tRNA synthetase [Escherichia coli 53638]
 gi|209921755|ref|YP_002295839.1| valyl-tRNA synthetase [Escherichia coli SE11]
 gi|238903359|ref|YP_002929155.1| valyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254037280|ref|ZP_04871357.1| valyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|256019909|ref|ZP_05433774.1| valyl-tRNA synthetase [Shigella sp. D9]
 gi|300818517|ref|ZP_07098726.1| valyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300906105|ref|ZP_07123824.1| valyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301304691|ref|ZP_07210799.1| valyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|312965938|ref|ZP_07780164.1| valyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312973925|ref|ZP_07788096.1| valyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|332281050|ref|ZP_08393463.1| valyl-tRNA synthetase [Shigella sp. D9]
 gi|2507438|sp|P07118|SYV_ECOLI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1790708|gb|AAC77215.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|85677005|dbj|BAE78255.1| valyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|157069413|gb|ABV08668.1| valyl-tRNA synthetase [Escherichia coli HS]
 gi|169891532|gb|ACB05239.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170520772|gb|ACB18950.1| valyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188489610|gb|EDU64713.1| valyl-tRNA synthetase [Escherichia coli 53638]
 gi|209915014|dbj|BAG80088.1| valyl-tRNA synthase [Escherichia coli SE11]
 gi|226840386|gb|EEH72388.1| valyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|238863779|gb|ACR65777.1| valyl-tRNA synthetase [Escherichia coli BW2952]
 gi|284924428|emb|CBG37553.1| valyl-tRNA synthetase [Escherichia coli 042]
 gi|300402048|gb|EFJ85586.1| valyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300528921|gb|EFK49983.1| valyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300840041|gb|EFK67801.1| valyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|309704762|emb|CBJ04113.1| valyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310331459|gb|EFP98715.1| valyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312289181|gb|EFR17075.1| valyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|315255615|gb|EFU35583.1| valyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|323181991|gb|EFZ67402.1| valyl-tRNA synthetase [Escherichia coli 1357]
 gi|323960299|gb|EGB55940.1| valyl-tRNA synthetase [Escherichia coli H489]
 gi|323975399|gb|EGB70500.1| valyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324019266|gb|EGB88485.1| valyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118819|gb|EGC12711.1| valyl-tRNA synthetase [Escherichia coli E1167]
 gi|332103402|gb|EGJ06748.1| valyl-tRNA synthetase [Shigella sp. D9]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|332749857|gb|EGJ80270.1| valyl-tRNA synthetase [Shigella flexneri 2747-71]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|331700496|ref|YP_004397455.1| glutamyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329127839|gb|AEB72392.1| glutamyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 501

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/300 (19%), Positives = 108/300 (36%), Gaps = 40/300 (13%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTR-EYYINDA 170
               KV + + + +PTG +H+G+ + A+     A       ++     +  R   +  D 
Sbjct: 1   MDDKKVRVRY-APSPTGFLHIGNAQSALFNYLFAKHFGGTMVLRIEDTDTKRNVPHGED- 58

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
            +QI  L     W         D   P+      Y +     L  KY  +LL+       
Sbjct: 59  -SQIENL----HWLGIDWDEGPDKPNPK---YAPYHQTQRVSLYHKYIQQLLDKG----- 105

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
              KDY+ +  +K++RD+ +  N +   +     + R +            +QG   +  
Sbjct: 106 FAYKDYTTEDELKVMRDE-QRKNGEAPHYDG-RWYGRSEEDQ-----KAAEKQGLKPDVR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L  P +      D+ +  + F S  +G D    + KS+G  TY   + A     Y     
Sbjct: 159 LHLPSNHIYAWDDIVKGNVQFNSDNMGGDF--IIEKSNGMPTY---NFAVVIDDYLMDIT 213

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +  AV  A+     +   +      +Y      K+SKR  + +  
Sbjct: 214 HVLR--GDDHIANTPKQIAVYEALGITPPRFGHI----TLIYNPKTGKKLSKRDKETLQF 267


>gi|331665927|ref|ZP_08366821.1| valine--tRNA ligase [Escherichia coli TA143]
 gi|331056978|gb|EGI28972.1| valine--tRNA ligase [Escherichia coli TA143]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|290992262|ref|XP_002678753.1| methionyl-tRNA synthetase [Naegleria gruberi]
 gi|284092367|gb|EFC46009.1| methionyl-tRNA synthetase [Naegleria gruberi]
          Length = 636

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 66/507 (13%), Positives = 153/507 (30%), Gaps = 105/507 (20%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN----------PTGPMHVG 139
           N  L+ S L K +           +N   +    +    +              GP H+G
Sbjct: 26  NRRLNNSSLLKSIIQYNTFSTCLSQNNASEKKTKSSAAATTTGGLITTPIYYVNGPPHIG 85

Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-E 198
           H    ++ D++     +  ++  +  +  D        +        +       +LP +
Sbjct: 86  HLFTTILSDSI-----YLYHKQLKNRH--DM-----IFSTGTDEHGSKVQRTAIKNLPNQ 133

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                  +     E  +K S       ++   ++   ++  + +   + +    K L  +
Sbjct: 134 NTLDDETINKSCVEFCEKISETFKTMMKDFNIQYTHYLRTSATREHRETVERVWKELEKR 193

Query: 256 HDIFISEDDFHRGDPSPIRDI-------IDNLARQGYVYEGILPPPKSKTTQKCD----- 303
            DI++ E   ++G      +        +     +G      L        +        
Sbjct: 194 GDIYLGE---YQGWYCTTDEAFTTDIEQVKITNEKGEEELVTLSKASGNRCEFVTEKNYK 250

Query: 304 ------MDRKQLLFRST-MVGDDVDRP-----LLKSDGSYTYFAADLAY--FKCKYERGF 349
                 MDR Q             +R      L+K +   +  + DL+    + + + G 
Sbjct: 251 FRLSKYMDRIQQWLEENPNTVKPKERYNELMELIKKEKERSPESLDLSISRTRDRVQWGI 310

Query: 350 ------DNMIYVM----------------------------GSD----HSGYVKRLEAVA 371
                 ++ IYV                             G D    H  Y     A  
Sbjct: 311 PVPDDSEHTIYVWLDALTNYLTAGSTLANESLNWPPTVQIIGKDILKFHGIY---WPAFL 367

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--DSVRFMMLWR 429
            A+ ++  +  ++    +        +KMSK  G+ ++   ++++ G   D +R+ +L  
Sbjct: 368 MALGKELPETILVHSYWLV-----NDVKMSKSLGNVVSPYDLLNQTGVEHDLLRYYLLSE 422

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                 D  F  V+   K N +  + +     R+  ++      ++ +     +    E 
Sbjct: 423 AVLSN-DSSFSMVRFPVKVNELADI-FGNLLTRAFNKKFHAEEGEIQYRNLQFDCPNAEQ 480

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQ 516
             + +  +LI  L +    + NA   +
Sbjct: 481 NPNQTAQELIELLNDLQEQVRNAYEER 507


>gi|312112848|ref|YP_004010444.1| valyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311217977|gb|ADP69345.1| valyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 942

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 63/220 (28%), Gaps = 36/220 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEY----GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
               + +   +S        +       +  K    +I     N TG +H+GH     + 
Sbjct: 5   TYDHAAIEPRMSKAWEDAEAFRAGKALEVNPKAEPYSIVIPPPNVTGSLHMGHALNNTLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA      G +V  +   + AG    +L                              
Sbjct: 65  DVLARFYRMRGRDVLWQPGTDHAGIATQSL------------------------------ 94

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V ++LA+K      +   E++L  V  +   +    I + LK L    D          
Sbjct: 95  -VERQLAEKQEPSRRDLGREEFLRRVWAWKEHSG-GTIVNQLKRLGASCDWSRERFTMDE 152

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G    +  +  +L   G +Y+           Q    D +
Sbjct: 153 GLSRAVVKVFVDLYNDGLIYKDKRLVNWDPKLQTAISDLE 192


>gi|227431221|ref|ZP_03913275.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352983|gb|EEJ43155.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 702

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 103/342 (30%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V+ D  A      G +V      ++ G +I         +  +A   
Sbjct: 48  PSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKI--------QQKAEAAGI 99

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           ++ D  +G      +K +  +L D    + +   E++    V     Q +    I + + 
Sbjct: 100 SEIDFLDG--MAKQIKDL-WKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIYKGEY 156

Query: 250 KALN-IQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +    +  + + +E      +R D   +          G    G       +      M 
Sbjct: 157 EGWYSVSDEEYFTESQLAEVYRDDAGKVIG--------GKAPSGHEVELVKEEAYFFKMS 208

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIY 354
           +                    R     +        DLA  +  ++ G        ++IY
Sbjct: 209 KYADWLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIY 268

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                 D + + K   A    V ++  + + +   ++           
Sbjct: 269 VWIDALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKS 328

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    + +  G D+VR+ +L 
Sbjct: 329 VVGHGWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLR 370


>gi|170021734|ref|YP_001726688.1| valyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169756662|gb|ACA79361.1| valyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|170732769|ref|YP_001764716.1| valyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254245639|ref|ZP_04938960.1| Valyl-tRNA synthetase, class Ia [Burkholderia cenocepacia PC184]
 gi|124870415|gb|EAY62131.1| Valyl-tRNA synthetase, class Ia [Burkholderia cenocepacia PC184]
 gi|169816011|gb|ACA90594.1| valyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 955

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I D ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQKSG-STITDQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVAVMVHPEDERYAHLI 244


>gi|262281814|ref|ZP_06059583.1| glutamyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262268|gb|EEY80965.1| glutamyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 485

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G V    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIVPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|288574650|ref|ZP_06393007.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570391|gb|EFC91948.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 646

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 123/386 (31%), Gaps = 52/386 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    +  D ++      GY+V   +++         +  S   +   A    D ++
Sbjct: 21  HIGHAYTTIGADVMSRYKRMDGYKV---FFLTGTDEHGQKIYESAKAKGMTAQELTD-EM 76

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALN- 253
            E +   + + ++          + +   E++   +V+    + M    I +   K L  
Sbjct: 77  AENFKRLLPVLNISN-------DDFIRTTEKRHERVVQSIFSKLMDQGDIYKGTYKGLYC 129

Query: 254 IQHDIFISEDDFHRGD--PSPIRDIIDNLARQGYV------------YEGILPPPKSKTT 299
           +  + ++ E      +  P   R +++      +             YE        KT 
Sbjct: 130 VPCETYVPESSMGENNTCPDCGRPLVEMEEESYFFKTSRYADRLLKYYEDNPKAIMPKTR 189

Query: 300 QKCDMDRKQLLFRSTMV------------GDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
               +   +   R   V            GD+     +  D    Y  A      C YE 
Sbjct: 190 YNEIVSFIKSGLRDQSVSRTSISWGIPVPGDEKHVIYVWFDALINYLTA------CGYED 243

Query: 348 GFDNMIYVMGSDHSGYVK---RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             + +     + H    K   R   V   +      +N  +      +      KMSK  
Sbjct: 244 DPEKLAAFWPNAHHLMAKDIIRFHCVIWPIMVMALGLNPPVGVFSHGWWTMEGEKMSKSK 303

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR-- 462
           G+ +    +VD  G+D+ R+ +L R+    +D DF +     + N            R  
Sbjct: 304 GNVVDPFEMVDLYGADAFRYFLL-RQVPFGMDGDFSEAAMAQRINSDLANDLGNLLSRTV 362

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQE 488
           S+  + +D       DL P ++   E
Sbjct: 363 SMVLKYRDGIVPSPSDLSPLDIELSE 388


>gi|146337356|ref|YP_001202404.1| leucyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166230613|sp|A4YJS8|SYL_BRASO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146190162|emb|CAL74154.1| leucine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 874

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +         I   +N   +     +E     P+G +H+GH R   +GD LA  
Sbjct: 8   AREAEPRWQRQWDEKAIFATKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYTLGDVLARF 66

Query: 154 MAFSGYEV 161
           M   G+ V
Sbjct: 67  MRAKGFNV 74


>gi|21282214|ref|NP_645302.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485394|ref|YP_042615.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297208757|ref|ZP_06925185.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912847|ref|ZP_07130289.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|24418688|sp|Q8NXY7|SYC_STAAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56749395|sp|Q6GBV8|SYC_STAAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21203650|dbj|BAB94350.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243837|emb|CAG42262.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296886702|gb|EFH25607.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885951|gb|EFK81154.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 466

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 111/337 (32%), Gaps = 42/337 (12%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E  Y   + + VG     K +S                
Sbjct: 73  KLI-----KRSQELNQSVPEIAEK-YIAAFHEDVGALNVRKATSNPRVMD---------- 116

Query: 236 YSVQAMMKIIRDDLKALNIQH---DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +  +++ I+D +          D++     F  G        ID+L          + 
Sbjct: 117 -HMDDIIQFIKDLVDRGYAYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VG 165

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                   K D     L  ++       D P  +    +    + +A+     E G    
Sbjct: 166 ARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTID 221

Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I+  GSD    +      +A + +   A        +   + +    KMSK  G+FI + 
Sbjct: 222 IHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVH 277

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            ++ EV  D +RF M+       ++++   V+     
Sbjct: 278 DIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|322390352|ref|ZP_08063879.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142953|gb|EFX38404.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 485

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGVIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|320527169|ref|ZP_08028356.1| methionyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132497|gb|EFW25040.1| methionyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 646

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 115/372 (30%), Gaps = 72/372 (19%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
             N         I + S  P    H+G+    V+ D +A      GY+V  +   ++ G 
Sbjct: 1   MENKKPYYITTAIAYTSGKP----HIGNVYEIVLADAIARFKRAEGYDVRFQTGTDEHGQ 56

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           ++   A +     +Q + +  + + + +        V     D +        E +   I
Sbjct: 57  KVEEKAKAAGKTPKQFVDDVAAVIKQQF-------DVMNTSYDYFIRTTDEAHERQVQKI 109

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGI 290
            K +  Q    I +   + L  Q D                      L   G   V  G 
Sbjct: 110 FKKFYDQG--DIYKGYYEGLYCQEDEAFYTKS--------------QLTEDGKCPVCGGE 153

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA----DLAYFKCKYE 346
           + P K +            L +         +P  + +     F      DL   +  ++
Sbjct: 154 VVPMKEEAYFFKMSKYADQLMKYIDEHPHFIQPESRKNEMVNNFLKPGLQDLCVSRTSFK 213

Query: 347 RG----FD--NMIYVM-------------GSDHS---GYVKRLEAVAAAVSEKKAQINVL 384
            G    FD  +++YV               +D +    Y K   A    + +   + + +
Sbjct: 214 WGIPVEFDPKHVVYVWIDALSNYITGLGYDADGNHGPLYKKYWPADLHLIGKDIIRFHTI 273

Query: 385 LCE-LVRLYRDGMPI-------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
               ++   ++ +P              KMSK  G+ I    +V   G D+VRF+ML   
Sbjct: 274 YWPIMLMALKEPLPKQVFGHPWLLIGDSKMSKSHGNVIYADDLVKLFGVDAVRFIMLHEM 333

Query: 431 N---SELLDFDF 439
                  + +D 
Sbjct: 334 PFAQDGHVTYDL 345


>gi|239825672|ref|YP_002948296.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511835|sp|C5D3P6|SYC_GEOSW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239805965|gb|ACS23030.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 466

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 114/352 (32%), Gaps = 46/352 (13%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L + +    E    L     K+ +          +H+G+ R A+V DT+   + F GYEV
Sbjct: 6   LYNTLTRKKELFEPLEPNKVKMYV--CGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYEV 63

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELADKYSS 219
               Y+++     + L      +  + L  +   + E +       +  +G + AD +  
Sbjct: 64  K---YVSNFTDVDDKLI-----KAARELGEDVPTIAERFIQAYFEDITALGCKKADVHPR 115

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              N           D  ++ +  +I     A  +  D++     F           ID 
Sbjct: 116 VTENI----------DTIIEFIQTLIDRGY-AYEVDGDVYYRTRKFKEYG-KLSHQSIDE 163

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L        G       K     D     L   +       D P  K    +    + +A
Sbjct: 164 LKA------GARIEVGEKKEDPLDF---ALWKAAKEGEICWDSPWGKGRPGWHIECSAMA 214

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGM 396
               KY     + I +            E   A + A++ K      L    + +  +  
Sbjct: 215 ---RKY---LGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNE-- 266

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             KMSK  G+F+ +  ++ ++    +RF ML       +++    ++   K 
Sbjct: 267 --KMSKSLGNFVLVHDIIQQIDPQVLRFFMLSVHYRHPINYSEELLESAKKG 316


>gi|330994144|ref|ZP_08318072.1| Isoleucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758611|gb|EGG75127.1| Isoleucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 957

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 87/290 (30%), Gaps = 43/290 (14%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAADLAY 340
           V   I+   + +                    D+ ++     D     GS        A+
Sbjct: 519 VMARIVEAFRVEGADAWYSSPASRFLGEGRNADEYEQVFDIVDVWFESGSTH------AF 572

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                +  F   +Y+ GSD   G+ +    +  +V  +       L        D    K
Sbjct: 573 VLGHGDMKFPADLYLEGSDQHRGWFQSS--LLESVGTRGVAPYRALVTNG-FVLDEQGRK 629

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I  + V D +G+D +R  ++    ++ L      +K+Q +          Y 
Sbjct: 630 MSKSLGNVIAPQDVNDTLGADILRLWVMNSDTNDDLRIGKEILKQQGEL---------YR 680

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-- 517
           R R+  R           + F        +E    E  ++  L E   ++  A    E  
Sbjct: 681 RLRNTLRWLLGA-----LEGFTEAERVPYAELPELERWVLHRLGELGGLVARAVETHEWV 735

Query: 518 -----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                 +         A+     +   R++       A+  K    R  L
Sbjct: 736 GVYPALHGFC------AADLSAFYFDVRKDTIYCDGPAS-LKRRAARTVL 778


>gi|326571496|gb|EGE21511.1| valyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 975

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVRLYDEGLIYRG 177


>gi|306826321|ref|ZP_07459655.1| glutamate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431597|gb|EFM34579.1| glutamate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 486

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 100/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL           K Y V
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLLAEG-----KAYKSY-V 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
                    + +  + +   +I+E   + G     +   +      G +    L   ++ 
Sbjct: 108 TEEELAAERERQEASGETPRYINE---YLGMSEEEKAAYVAEREAAGIIPTVRLAVNEAG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G
Sbjct: 165 IYKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|284039738|ref|YP_003389668.1| glutamyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283819031|gb|ADB40869.1| glutamyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 509

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 20/215 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G ++     I D     N          Q+A
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAR---KMGGKMLLR--IED--TDQNRFVPGAEEYIQEA 62

Query: 189 LYNNDSDLPEGYYPG----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     ++ EG  PG     Y +   +E+  K +  L++            +     +  
Sbjct: 63  LKWVGIEIDEGQGPGGPHAPYRQSERREIYQKEAQRLVDEG-----KAYYAFDTAEELDA 117

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +R  L+  N     + +       +   ++ + +      G  +   L  P+ +  +  D
Sbjct: 118 MRKRLEEANAPAAQYNAITRMQMRNSLTMKPEEVKARMDAGDPFVIRLKTPRKEEVRLND 177

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           + R  +   S+ +    D+ LLKSDG  TY  A++
Sbjct: 178 LIRGWVNVHSSAID---DKVLLKSDGLPTYHLANI 209


>gi|227532988|ref|ZP_03963037.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189389|gb|EEI69456.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 660

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                   +    +  L  
Sbjct: 16  PSGKLHIGNAYTTIAADVLARYKRLMGYDVF-----------------FLTGTDEHGLKI 58

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  ++L    +K++       V+A+  I+   +K 
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLW--KMLEITNDKFIRTTDKEHVEAVQTIVERLIKQ 116

Query: 252 ----LNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L      +  ED+ +  +   S +    D     G    G       + +    M 
Sbjct: 117 GDVYLGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMS 176

Query: 306 RK--QLLFRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIY 354
           +   +LL       D V     K++    +      DLA  +  +  G        +++Y
Sbjct: 177 KYTDRLLKYYDEHLDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVY 236

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                +DH+ + K   A    + ++  + +++   ++ +         
Sbjct: 237 VWVDALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKK 296

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +V+  G D++R+ ++ 
Sbjct: 297 IYAHGWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMR 338


>gi|260588107|ref|ZP_05854020.1| glutamate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331082325|ref|ZP_08331451.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260541634|gb|EEX22203.1| glutamate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330400811|gb|EGG80412.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 482

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 113/296 (38%), Gaps = 44/296 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MHVG+ R A+    +A       ++     +  +E ++         L +   
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEDGSFMLRIE--DTDQERFVE------GALDIIYR 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  L +++    +G Y G Y++     + +  KY+ +L+   +  +        +++
Sbjct: 61  TLAKTGLVHDEGPDKDGGY-GPYVQSERNAQGIYLKYAKQLIEQGD-AYYCFCTKERLES 118

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +   + +   A+  +H + +S            ++ I+     G  Y      P   TT 
Sbjct: 119 LKSSVGEKEIAMYDKHCLHLS------------KEEIEEKLANGEPYVIRFNMPTEGTTT 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++
Sbjct: 167 FQDDIYGAITVPNNELD---DLILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEY 218

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                +   +  A   +      + C L+    +    K+SKR+G   +   +V++
Sbjct: 219 LSSSPKYNRIYEAFGWEIP--TYVHCPLIT---NEEHKKLSKRSGHS-SYEDLVEQ 268


>gi|150008894|ref|YP_001303637.1| glutamyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298375877|ref|ZP_06985833.1| glutamate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|166226839|sp|A6LEA1|SYE_PARD8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|149937318|gb|ABR44015.1| glutamyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298266914|gb|EFI08571.1| glutamate--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 505

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 103/294 (35%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G ++     I D  +Q    
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQNGGDMILR--IEDTDSQ--RF 52

Query: 178 ALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                    +AL        E    G   G Y +   +E+  KY  +LLN          
Sbjct: 53  VPGAEDYIIEALTWLGIKFDEGVSFGGNYGPYRQSERREIYKKYVDQLLNDG-----HAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +   A ++  R ++     Q+D   S     R   +  ++ + +L   G+ Y      
Sbjct: 108 IAFDTPAELEEKRKEIANF--QYD--ASTRSQMRNSLTLSQEEVQSLIESGHQYVVRAKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
             ++     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPNEDIHVNDLIRGEVVINSSILD---DKVLYKSADQLPTYH---LANIVDDHLMEVTHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +      +    +     L+         K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRFFGWEDTMPSFAHLSLLLKPEG--NGKLSKRDGD 267


>gi|30249589|ref|NP_841659.1| gltX; glutamate-tRNA synthetase (catalytic subunit)(sye protein)
           [Nitrosomonas europaea ATCC 19718]
 gi|39932151|sp|Q82U77|SYE_NITEU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|30138952|emb|CAD85535.1| gltX; glutamate-tRNA synthetase (catalytic subunit)(sye protein)
           [Nitrosomonas europaea ATCC 19718]
          Length = 463

 Score = 47.2 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 93/289 (32%), Gaps = 61/289 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF------ 182
           + +PTG +H+G  R A+     A                     Q     L +       
Sbjct: 7   APSPTGYLHIGGARTALFSWAFAR-------------------KQGGKFVLRIEDTDLER 47

Query: 183 --WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  QA+ +  + L   Y  G Y +        + + +LL      +        + A
Sbjct: 48  STQQSVQAILDGMAWLGLDYDEGPYYQMQRLNRYQEVAEQLLTQGL-AYQCYASREELDA 106

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA--RQGYVYEGILPPPKSKT 298
           + +  R  L  L  ++D      D  +  P+ ++ ++  L   + GYV    L   K   
Sbjct: 107 LREQQR--LAGLKPRYD--GRWRDSRQTPPAGVKPVV-RLKTPQHGYVVFDDLVKGKISV 161

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               ++D               D  LL+SDG+ TY    +       + G  ++I   G 
Sbjct: 162 ANH-ELD---------------DLVLLRSDGTPTYNFGVV---LDDLDMGITHVIR--GD 200

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           DH     R   +  A+     Q        V +       ++SKR G  
Sbjct: 201 DHVNNTPRQINILKALGAAIPQ-----YAHVPMILGADGERLSKRHGAV 244


>gi|316931732|ref|YP_004106714.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315599446|gb|ADU41981.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 876

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  S    + I   RN   +     +E     P+G +H+GH R   +GD +A  M   GY
Sbjct: 14  KWQSKWDEAKIFATRNDDLRKKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGY 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|160947754|ref|ZP_02094921.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
 gi|158446888|gb|EDP23883.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
          Length = 649

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 56/419 (13%), Positives = 129/419 (30%), Gaps = 78/419 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+GH    +V D L       G++V                        +     
Sbjct: 15  PNSNLHLGHTYTTIVADVLKKYKQAQGFDVF-----------------FTTGTDEHGQKL 57

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMM-------K 243
            +S +  G  P  Y+  + +   + + +  ++F         + + +V  +        +
Sbjct: 58  QESAIKAGKAPLEYIDPIVESAKELWRTLDIDFDAFVRSTDKIHEKNVSEIFTKLYEKGE 117

Query: 244 IIRDDLKALN-IQHDIFISEDDFHRGDP--------------------SPIRDIIDNLAR 282
           I +   K +  +  + F +E     G+                     S  +D +  L  
Sbjct: 118 IYKGSYKGMYCVPCEAFWTESQLVEGNKCPDCGREVSPSEEETYFFRLSKYQDRLLKLYE 177

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG---------DDVDRPLLKSDGSYTY 333
           +       + P   K      ++        T            D+     +  D    Y
Sbjct: 178 EN---PDFIQPESRKNEMISFINEGLTDLSVTRSSFDWGVRVPFDEKHVVYVWIDALSCY 234

Query: 334 FAADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLC 386
               + Y     E  F+      ++++G +    + R  A+      ++        +  
Sbjct: 235 LTG-IGYGTD--EEKFNKFWPCDVHLIGKE----IMRFHAIIWPAILMALDLPLPKKIFG 287

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQ 445
               L+ D    KMSK  G+ +    +++  G D++R+ ML      +  +F + K+  +
Sbjct: 288 HGWILFDD---DKMSKSKGNIVYAEPIIERYGMDALRYFMLREFTFGQDGNFTYTKMLNR 344

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              + V  +    +R  ++  +  D F     +      ++I   +       +L+  L
Sbjct: 345 INSDLVNDLGNLVSRSVAMCEKYFDGFVPSQTELTELDNDLIEIATTTRDRVAELMDKL 403


>gi|134094085|ref|YP_001099160.1| isoleucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166229743|sp|A4G3E6|SYI_HERAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|133737988|emb|CAL61033.1| isoleucine tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Herminiimonas arsenicoxydans]
          Length = 959

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 30/250 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST---MVGDDVDRPLLKSD-------GS 330
              G ++    P    +  Q+ + +  +   +     ++GDD D  L   D         
Sbjct: 511 KESGDLHPRT-PELLEQIAQRVEKNGIEAWLKLDPKELLGDDADMYLKNKDTLDVWFDSG 569

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
            T+        K +     D  +Y+ GSD   G+       ++ ++       +L    V
Sbjct: 570 TTHQTVLRGSHKEQLAFPAD--LYLEGSDQHRGWFHSSLLTSSMLNGHAPYKALLTHGFV 627

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +  + V D +G+D +R  +     S  L      +K  ++  
Sbjct: 628 V---DGEGKKMSKSKGNVVAPQKVSDSLGADILRLWVAATDYSGELSISDEILKRVTE-- 682

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  +Y R R+  R       D D        +    E D   +  +  +     ++
Sbjct: 683 -------SYRRIRNTLRFLLSNTSDFDAG-KDLVAVADMLEIDRYAIAQMNAMQ--NEIV 732

Query: 510 ENATIAQEPY 519
            +   A E +
Sbjct: 733 AH-YRAYEFH 741


>gi|45272228|gb|AAS57576.1| glutamyl-tRNA synthetase-like protein [Lactobacillus fermentum]
          Length = 310

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 42/299 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
            KV + + + +PTG +H+G+ + A+     A       ++     +  R     +A  + 
Sbjct: 3   QKVRVRY-APSPTGFLHIGNAQSALFNYLFARHFDGTMVLRIEDTDTKRNVEDGEASQRE 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           N   L + W       N  +     Y      K     +  KY  ELL+          K
Sbjct: 62  NLHWLGIDW---DEGPNKPNPKYAPYRQSERNKEG---IYHKYIQELLDKGI-----AYK 110

Query: 235 DYSVQAMMKIIRDDLKALNI--QHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           DYS +  +  +R+  KA N    +D  +  + +  +               +G       
Sbjct: 111 DYSTEEELAEMRERQKANNEPPHYDGRWYGKSEEEQKAA----------EAKGLKPTIRF 160

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK    +  D+ R  + F S  +G D    + KSDG  TY   + A     +     +
Sbjct: 161 HFPKDHDYEWDDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDITH 215

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++   G+DH     +  A+  A+         +      ++      K+SKR  D +  
Sbjct: 216 VLR--GADHISNTPKQIAIYEALGWDHPTFCHIPL----IFNPKTRKKLSKRDKDTLQF 268


>gi|39933364|ref|NP_945640.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|60390713|sp|Q6ND22|SYL_RHOPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39652989|emb|CAE25731.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 876

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    + I   RN   +     +E     P+G +H+GH R   +GD +A  M   GY
Sbjct: 14  KWQAKWDEAKIFATRNDDLRKKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGY 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|116617428|ref|YP_817799.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096275|gb|ABJ61426.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 702

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 103/342 (30%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V+ D  A      G +V      ++ G +I         +  +A   
Sbjct: 48  PSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKI--------QQKAEAAGI 99

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
           ++ D  +G      +K +  +L D    + +   E++    V     Q +    I + + 
Sbjct: 100 SEIDFLDG--MAKQIKDL-WKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIYKGEY 156

Query: 250 KALN-IQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +    +  + + +E      +R D   +          G    G       +      M 
Sbjct: 157 EGWYSVSDEEYFTESQLAEVYRDDAGKVIG--------GKAPSGHEVELVKEEAYFFKMS 208

Query: 306 RKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIY 354
           +                    R     +        DLA  +  ++ G        ++IY
Sbjct: 209 KYADWLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIY 268

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                 D + + K   A    V ++  + + +   ++           
Sbjct: 269 VWIDALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKS 328

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    + +  G D+VR+ +L 
Sbjct: 329 VVGHGWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLR 370


>gi|229470636|sp|A5CD02|SYE1_ORITB RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
          Length = 478

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 102/314 (32%), Gaps = 65/314 (20%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
               +   + +PTG +H+G  R A+     A       L+     +  R         + 
Sbjct: 1   MTNIVTRFAPSPTGFLHIGGARTALFNYLFARHHKGKFLLRIEDTDAARS-------TEE 53

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKYSSELLNFPEEKWLP 231
             +++    ++ +  ++ND      +Y    L+    +  EL  K       F   + + 
Sbjct: 54  YKISIIDSLKWLKINWDNDI-----FYQSANLQRHVNIALELV-KSGKAYYCFTSPEEID 107

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + +  ++      I       NI                         L      Y    
Sbjct: 108 LQRQLAITQKQSFIFRSPWRNNIP-------SSLS-------------LKNNNKAYVIRF 147

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P   TT   D  + +++F++  +    D  L++SDG+ TY    LA     ++ G  +
Sbjct: 148 KAPDYGTTIINDHVQGEVVFQNQQID---DMILVRSDGTPTYM---LAVVVDDHDMGITH 201

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I   G DH     +  A+  A+      +       + L       K+SKR G      
Sbjct: 202 IIR--GDDHLTNAAKQIALYDALGWAAPAMVH-----IPLIYGPDGTKLSKRHG------ 248

Query: 412 HVVDEVGSDSVRFM 425
                +G D+ + M
Sbjct: 249 ----AIGVDAYQKM 258


>gi|167769106|ref|ZP_02441159.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
           17241]
 gi|167668746|gb|EDS12876.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
           17241]
          Length = 462

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 137/442 (30%), Gaps = 102/442 (23%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  KV +          +H+G+ R   V DTL   + + GY+VT              
Sbjct: 16  PIEPGKVRMYACGPTVYNYIHIGNARPICVFDTLRRYLEYRGYDVT-------------- 61

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
                   + Q   + D                          +L+N   E+ +  V++ 
Sbjct: 62  --------FVQNFTDID-------------------------DKLINKANEEGI-TVREV 87

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG------- 289
           + + + + + D  K L I+             +   I +++  L  +G+ YE        
Sbjct: 88  AERYIGEYMTDT-KGLGIRPADIHPRAT---ENIDTIINMVKTLEEKGFAYERDGSVYFR 143

Query: 290 ---ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-------------DGSYTY 333
                   K       +++    +  S    D +D  L K+             +G   +
Sbjct: 144 SRRFEEYGKLSHQPLEELEAGARIDVSDKKEDPLDFVLWKAAKPGEPSWPSPWGEGRPGW 203

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                A  +    R   + I +            E   A  SE       +   +   Y 
Sbjct: 204 HIECSAMIR----RHLGDTIDIHCGGQDLIFPHHENEIAQ-SECCTGAEYVHYWMHNGYI 258

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +    KMSK  G+F T+R V ++ G + ++FMML       +++    +++         
Sbjct: 259 NVDNRKMSKSLGNFFTVREVAEKFGYEPIKFMMLQAHYRSPINYSLEVIEQ--------- 309

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                  CR+   +  +    LDF L           F           A++   +++  
Sbjct: 310 -------CRAALERLHNCRDSLDFALESALGQGDWHAFREKMDA---RAAQFVEAMDD-- 357

Query: 514 IAQEPYKLAFYLYDLASVFHGH 535
                  +A  L+++A   + +
Sbjct: 358 DLNTADGIAA-LFEMARDINTY 378


>gi|71893493|ref|YP_278939.1| glutamyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 468

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 96/306 (31%), Gaps = 46/306 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         ++       +QI  L  
Sbjct: 9   APSPTGFLHIGGARTALFNYLFAKHHNGDFILRIEDSDNSRNIKD----GEKSQIENLLW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++               G Y +    E   K + EL+           K ++  
Sbjct: 65  LGIIPDEKPGSETK--------FGPYRQSEKLERYQKLAQELIK----------KGFAYY 106

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A     +++LK    +          +  +   I D       +   +       K+K  
Sbjct: 107 AFDN--QEELKLQKKEQIAKGIFSFRYDQNWLKISDQEKQKRLKNKHFVIRFKVDKAKNF 164

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q+ F  + + D     ++KSDG  TY   + A     ++    ++    G +
Sbjct: 165 CWNDLVRGQICFEGSAISDW---VIIKSDGFPTY---NFAVVVDDFDMEISHI--FRGEE 216

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A + K  +        + +  D    K+SKR  +           G 
Sbjct: 217 HISNTPKQIGIYQAFNWKTPKFGH-----LTIITDKNGKKLSKRDKNLFQFIEDYKNQGY 271

Query: 420 DSVRFM 425
            S  F 
Sbjct: 272 HSEAFF 277


>gi|255038008|ref|YP_003088629.1| glutamyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950764|gb|ACT95464.1| glutamyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 516

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 54/288 (18%), Positives = 97/288 (33%), Gaps = 35/288 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP+H G  R A+     A       L+     +  R  Y+          A +  
Sbjct: 11  APSPTGPLHAGGVRTALYNYLFARQQGGQMLLRIEDTDQNR--YV--------PGAEAYI 60

Query: 183 WRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               + L     + P +G     Y +   KE+  +Y+  L+             +     
Sbjct: 61  LEALEWLGIGIDEGPQQGGPHAPYRQSERKEMYREYAERLVQEG-----KAYYAFDTPEQ 115

Query: 242 MKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +  +R  L+A  +    +  I+  +          +    L   G  Y   +     +  
Sbjct: 116 LDDMRKRLEAAKVAAVQYNAITRTEMTNSLTLSAEETQARL-DSGDPYVIRMKISPKEDI 174

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R  ++  S+ +    D+ LLKSDG  TY    LA     +  G  ++I   G +
Sbjct: 175 RFNDLIRGWVVVHSSQID---DKVLLKSDGMPTYH---LANIVDDHLMGITHVIR--GEE 226

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                     +   +  +          L+ L  DG   K+SKR  D 
Sbjct: 227 WLPSAPLHVLLYRYLGWESTMPQFAHLPLL-LKPDGNG-KLSKRDADL 272


>gi|239636927|ref|ZP_04677925.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597475|gb|EEQ79974.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 466

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 111/334 (33%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV    Y+++     +
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVV---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  + L  +  ++ + Y    Y       +    S+  +    ++ +  +K 
Sbjct: 73  KLI-----KRSKELNESVPEIADKYIKAFYEDVGALNVKKATSNPRVMNHMDEIIDFIK- 126

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  K++ +   A     D++     F           ID+L          +    
Sbjct: 127 -------KLVDEGY-AYESNGDVYFRTRQFKDYG-KLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
               QK D     L  ++       + P  +    +    + +A+     E G    I+ 
Sbjct: 169 EAGDQKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            E+  D +RF M+       ++++   V      
Sbjct: 281 KEIDPDVLRFFMISVHYRSPINYNLELVSAAKSG 314


>gi|262201990|ref|YP_003273198.1| valyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085337|gb|ACY21305.1| valyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 884

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 78/269 (28%), Gaps = 43/269 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     L    V    +  +        +I     N  G +H+GH    V+ D L+  
Sbjct: 18  DPAEHEARLYQGWVDAGYFTADAESDKPAFSIVIPPPNVNGSLHMGHAYEHVLMDALSRR 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++  A+++    ++ L +                      
Sbjct: 78  RRMQGYEVL-------WLPGMDHAAIAMQTMVERKLADE--------------------- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V     + +   I + ++ L    D          G    +
Sbjct: 110 ----GKTRDDLGREAFIERVWAEKAE-IGGNIGEQMRRLGDGVDWSRERFTMDEGLSRAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQ---------KCDMDRKQLLFRSTMVGDDVDRPL 324
           + +   +   G +Y        S   +           D++ + + FR   + DD    +
Sbjct: 165 QTVFKKMFDDGLIYRAERLVNWSPVLKTAVSDIEVNYADVEGELVSFRYGSLDDDEPHIV 224

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +    T    D A      +  + ++I
Sbjct: 225 VATTRMET-MLGDTAIAVHPDDERYAHLI 252


>gi|224475676|ref|YP_002633282.1| glutamyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420283|emb|CAL27097.1| putative glutamyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 484

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 101/302 (33%), Gaps = 50/302 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          GD +  +         +    +   +Q + L  
Sbjct: 10  APSPTGYLHIGNARTALFNYLYAKHYDGDFIVRIED----TDKKRNLDDGESSQFSNLEW 65

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSV 238
                    L  ++S   +  Y G Y +    +  D    +LL   +  K     ++   
Sbjct: 66  L-------GLEWDESVDKDKGY-GPYRQSERAKFYDPLVEQLLAEDKAYKCYMTEEELEQ 117

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   +I R +      +H    +E+            I                 PK K 
Sbjct: 118 EREEQITRGETPRYAGKHAHLTAEEQAAFEAEGRQPSI-------------RFRVPKGKV 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
            +  DM + ++ F S  +GD     ++K DG  TY  A  A      +  +  +  V+ G
Sbjct: 165 YKFDDMVKGEVSFESDNIGDW---VIVKKDGVPTYNFAVAA------DDHYMEISDVIRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  +        + L  +    K+SKR G  +       ++
Sbjct: 216 DDHVSNTPKQLMIYEAFGWEPPRFGH-----ISLIVNEQRKKLSKRDGQILQFIEQYRDL 270

Query: 418 GS 419
           G 
Sbjct: 271 GY 272


>gi|254304305|ref|ZP_04971663.1| glutamate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324497|gb|EDK89747.1| glutamate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 510

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 93/286 (32%), Gaps = 28/286 (9%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K     V+ +PTG  HVG    A+     A +   +G +        D         
Sbjct: 4   DCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHV---NGGDFILRIEDTDRNRYTEGSE 60

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
             +F   +    +       G   G Y +    +L  KY+ EL+      +        +
Sbjct: 61  QMIFDALKWLDLDYSEGPDVGGDYGPYRQSERFDLYGKYAKELVEKGG-AYYCFCDHERL 119

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           + + +  +     L   +D         + +       I+   + G  Y   L  P    
Sbjct: 120 ENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPYVIRLKMPYEGE 168

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  G  ++I     
Sbjct: 169 TVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLMGITHVIR--AE 220

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 221 EWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 261


>gi|332295077|ref|YP_004437000.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178180|gb|AEE13869.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 508

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 110/338 (32%), Gaps = 45/338 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V  D LA      G +V      ++ G +I           Q+A  NN SD 
Sbjct: 19  HIGHAYTTVACDVLARFRRLQGKDVFFLTGTDEHGRKI-----------QKAAENNSSDA 67

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALN- 253
                    +        +  + + +   +E+    V  +   V     I +        
Sbjct: 68  KSYVDRFAKIFQDAWLALNISNDDFIRTTQERHYKAVAKFWQIVNDNGDIYKGKYSGWYC 127

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE------------------------- 288
           +  + F S++    G        ++ +  + Y +                          
Sbjct: 128 VPCETFFSDEQLVDGKCPDCGREVEWMEEESYFFRLSKYTQPLLELYNDKKNFVMPDFRR 187

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD-LAYFKCKYER 347
             +    S+  +   + R +  +   +  D      +  D    Y  A   A  + K++R
Sbjct: 188 NEVIQFVSQGLKDLSISRSKFSWGIKVPDDPGHVIYVWFDALLNYLTAAGFAEDEEKFKR 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +   ++V+G +    + R  AV        A++ +        +      KMSK  G+ 
Sbjct: 248 IWPADVHVVGKE----IVRFHAVIWPAMLMSAKLPLPKMVFGHGWWTMEGEKMSKSKGNV 303

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
           + +  +  +VG D +R+ ++      +  DF +  +KE
Sbjct: 304 VDIWALSKDVGVDPMRYFLMKAVPFGQDGDFSYKGLKE 341


>gi|148284334|ref|YP_001248424.1| glutamyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|146739773|emb|CAM79639.1| glutamyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 486

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 102/314 (32%), Gaps = 65/314 (20%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
               +   + +PTG +H+G  R A+     A       L+     +  R         + 
Sbjct: 9   MTNIVTRFAPSPTGFLHIGGARTALFNYLFARHHKGKFLLRIEDTDAARS-------TEE 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKYSSELLNFPEEKWLP 231
             +++    ++ +  ++ND      +Y    L+    +  EL  K       F   + + 
Sbjct: 62  YKISIIDSLKWLKINWDNDI-----FYQSANLQRHVNIALELV-KSGKAYYCFTSPEEID 115

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + +  ++      I       NI                         L      Y    
Sbjct: 116 LQRQLAITQKQSFIFRSPWRNNIP-------SSLS-------------LKNNNKAYVIRF 155

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P   TT   D  + +++F++  +    D  L++SDG+ TY    LA     ++ G  +
Sbjct: 156 KAPDYGTTIINDHVQGEVVFQNQQID---DMILVRSDGTPTYM---LAVVVDDHDMGITH 209

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I   G DH     +  A+  A+      +       + L       K+SKR G      
Sbjct: 210 IIR--GDDHLTNAAKQIALYDALGWAAPAMVH-----IPLIYGPDGTKLSKRHG------ 256

Query: 412 HVVDEVGSDSVRFM 425
                +G D+ + M
Sbjct: 257 ----AIGVDAYQKM 266


>gi|332882145|ref|ZP_08449779.1| glutamate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332679896|gb|EGJ52859.1| glutamate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 505

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 99/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G E        D+   +   
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGEFIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++      D  +  G   G Y +   +++  KY  ELL+            + 
Sbjct: 57  EEYILESFRWLGIPFDEGVSFGGDHGPYRQSERRDIYKKYVQELLDAG-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               ++  R +++    Q+D   S     R   S   D +  L  +G  Y         +
Sbjct: 112 TPEELEAKRQEIQNF--QYD--ASTRGMMRNSLSLSADEVKRLLAEGRQYVVRFKIEPGE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R  ++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVDDMIRGDVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVTHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A              L+ L  DG   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWADTMPKFAHLPLL-LKPDGKG-KLSKRDGD 267


>gi|326560993|gb|EGE11358.1| valyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 975

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVRLYDEGLIYRG 177


>gi|254797084|ref|YP_003081922.1| glutamyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590329|gb|ACT69691.1| glutamyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 409

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 17/170 (10%)

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A +  I   LK L++ HD+ +    +   + +  R++   L  +G  Y            
Sbjct: 52  AYLDSILQGLKWLSLSHDVLV----YQSVNVNRHREVALELLNRGKAYHDNGAVRLKVNH 107

Query: 300 QKCDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +       +L   ++ GD + D  +L+SDGS TY    LA     ++ G  ++I   GS
Sbjct: 108 DETVKFSDLILGEISVDGDSINDVVILRSDGSPTYM---LAVVVDDHDMGITHIIR--GS 162

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           DH +    + + +   +     +I       + L  +    K+SKR G  
Sbjct: 163 DHITNTFTQ-KLIYEGMGWSLPEIAH-----IPLIHNTHGAKLSKRDGAV 206


>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 465

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 125/431 (29%), Gaps = 101/431 (23%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  ++ DTL   + + GY+VT   Y+                  Q 
Sbjct: 27  CGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVT---YV------------------QN 65

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +D  +   +  G+  + V  +   +Y  +            +K  +V   +     
Sbjct: 66  FTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLG-------IKRATVHPQVTD--- 115

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGILPPPKSK 297
                                +   I + I  L  +GY Y                 K  
Sbjct: 116 ---------------------NIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLS 154

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAA----DLAYFK---CKYERG 348
             ++ D++    +  +      +D  L   K +G   + +        +        +R 
Sbjct: 155 GQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRY 214

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I +            E   A    +  +       +   Y +    KMSK  G+F 
Sbjct: 215 LGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKYW-MHNGYININDEKMSKSKGNFF 273

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VRF ML       ++F   ++  Q+K                   + 
Sbjct: 274 TVRDISKLYDLEIVRFFMLSAHYRNPVNFS-DEMLNQAKAG---------------LERL 317

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAF 523
            +    L+F L        ES     E++L+  L  + +   +A             +  
Sbjct: 318 YNTKEKLEFTLSNL----VESPLTEKEVELVKELDGFRQKFIDAMDDDVNTADAVSVI-- 371

Query: 524 YLYDLASVFHG 534
             ++LA + + 
Sbjct: 372 --FELAKLINS 380


>gi|188997460|ref|YP_001931711.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932527|gb|ACD67157.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 628

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 110/351 (31%), Gaps = 32/351 (9%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V  D LA      G +       ++ G +I   A       ++         
Sbjct: 19  HLGHAYTTVAADVLARYYRQIGVKTFFLTGTDEHGQKIQKTAEEKGISPKELADKTHLAF 78

Query: 197 PEGYYPG-------------VYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSVQAM 241
            E +                 ++K V       Y      L+  E  +    +++  +  
Sbjct: 79  KELWKKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLSEYESYYCVGCEEFKTETE 138

Query: 242 MKIIRDDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +K    D K  ++++    + E+ +          +++   +            +  +  
Sbjct: 139 IKDY--DYKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEKNPEFILPDFRKNEVVSFV 196

Query: 301 KCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           K  +    +  +   V        D      +  D    Y  A + Y +   E    + +
Sbjct: 197 KQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLTA-VGYPENLNEFWPAD-V 254

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +++G D    + R  AV        A++ +        +      KMSK  G+ +     
Sbjct: 255 HIVGKD----ILRFHAVYWPAFLMSARLEISKKVFAHGWWTVEGHKMSKSLGNVVDPFKA 310

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
            DE G D +R+ +L R+    LD DF K    ++ N            RS+
Sbjct: 311 ADEFGVDKLRYFLL-REVPFGLDGDFSKSAVINRINSDLANDLGNLISRSL 360


>gi|73663535|ref|YP_302316.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|109894949|sp|Q49V39|SYC_STAS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72496050|dbj|BAE19371.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 466

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/421 (12%), Positives = 132/421 (31%), Gaps = 58/421 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GYEV       D   +  
Sbjct: 16  EPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYEVVFVSNFTDVDDK-- 73

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                   +  + L  +   + + Y    Y       +    S+  +    +  +  +KD
Sbjct: 74  ------LIKRSKELDESVETIADRYIDAFYEDVGALNVKKATSNPRVMNHMDDIINFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +        D+     +      +      +   +   I+   ++    +  L    
Sbjct: 128 LVDEGYAYESGGDV-YFRTRKFQDYGKLSHQSLNDLKVGARIEQGEQKEDALDFTLWKQA 186

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                  +          +  G+            +    + +AY     E G    I+ 
Sbjct: 187 KPGEISWE----------SPFGEGRP--------GWHIECSVMAYH----ELGATIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            G+D    +      +A + +   A        +   + +    KMSK  G+F+ +  ++
Sbjct: 225 GGTDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFVLVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            ++  D +RF M+       ++++   V+                  +S   + ++ +  
Sbjct: 281 KQIDPDVLRFFMISVHYRSPINYNMELVE----------------AAKSGLERVRNSYQA 324

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           ++        I  +S++  +E+     L ++  V+ +         +  + YDLA + + 
Sbjct: 325 IEEREAIATDIEAQSDY-IAEID--KILEQFETVMND--DFNTANAITAW-YDLAKLANK 378

Query: 535 H 535
           +
Sbjct: 379 Y 379


>gi|315171290|gb|EFU15307.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 478

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAKRFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|50365466|ref|YP_053891.1| glutamyl-tRNA synthetase [Mesoplasma florum L1]
 gi|67461749|sp|Q6F0G6|SYE_MESFL RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|50364022|gb|AAT76007.1| glutamyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 482

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 44/293 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A++         GD +  +      ++ R        +Q   L  
Sbjct: 9   APSPTGFLHIGNTRTALMNYLFAKHYNGDFIVRIEDT---DLER-NVEGAIESQFENLNW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  L   +         G Y++        + + +L++          + +   
Sbjct: 65  LGINADESFLKPGEEK------YGKYMQSQKFGRYQELAEKLISI-----KKAYRCFCTT 113

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++   +D  A  I    +  +    R   S I   + +          I       T 
Sbjct: 114 EELEKDYEDQVAKGIVATKYSGKCS--RLSESEIESNLKSNKD-----FSIRFLVPETTL 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  + ++ F S  +GD     +LK++   TY   + A     ++    +++   G +
Sbjct: 167 NIKDFIKGEITFDSKELGDF---VILKTNKIATY---NFAVVVDDFDMEISHVLR--GEE 218

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     R   +  A   +  Q   +      L  D    K+SKR+G+ +    
Sbjct: 219 HISNTPRQILIYQAFGWETPQFGHM-----SLIVDSTGKKLSKRSGNALFFIE 266


>gi|313665195|ref|YP_004047066.1| valine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949462|gb|ADR24058.1| valine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 872

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 69/227 (30%), Gaps = 38/227 (16%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           LSP Y    + K      +    +  N   K  K +I     N TG +H+GH     + D
Sbjct: 5   LSPKYNHILVEKTKYQYWLDKKLFKANPNSKKPKFSIILPPPNVTGKLHIGHAWDTSLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +      +GY+    +        ++   +S   + +Q L     D  +          
Sbjct: 65  AIIRFKKLTGYD--TLFLPG-----MDHSGISTQVKVEQKLKKQGID--KNKLGREKFLL 115

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              +  ++Y+S                        IIR+    L +  D    +      
Sbjct: 116 EAWKWKEEYAS------------------------IIREQWAKLGLSLDYSTEKFTLDED 151

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
               +++I         +Y+           QK  +   +++++ T 
Sbjct: 152 INQIVKEIFVKFYNDKIIYKDKQIVNWD-PEQKTAISNVEVIYKETQ 197


>gi|260426547|ref|ZP_05780526.1| valyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260421039|gb|EEX14290.1| valyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 1025

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 35/185 (18%)

Query: 250 KALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC-DMDRK 307
           +AL   HD F  + +F    D +   D++ +L  QG  Y G+    +++      D D  
Sbjct: 537 EALRKMHDFFGKDAEFLMVEDAAAAEDMLADLLSQGTDYTGVDQRRRAQAIPVFRDPDVL 596

Query: 308 QLLFRS------TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              F S      T+   +  R L K      YF  D+                V G D  
Sbjct: 597 DTWFSSGLWPIGTLGWPEKTRELEK------YFPTDVL---------------VTGQD-I 634

Query: 362 GYV--KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +    R+  +  AV ++     V L  LV   RD    KMSK  G+ +    ++DE G+
Sbjct: 635 LFFWVARMMMMQLAVVDEIPFHTVYLHGLV---RDAKGKKMSKSLGNVVDPLEIIDEYGA 691

Query: 420 DSVRF 424
           D++RF
Sbjct: 692 DALRF 696



 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 57/227 (25%), Gaps = 42/227 (18%)

Query: 92  YLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
                     +      +G         +    +I     N TG +H+GH     + D L
Sbjct: 6   TFDAGAAEARIYEAWEKAGAFKAGANASRPETFSIMIPPPNVTGSLHMGHAFNNTLQDIL 65

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  GY+              +   ++     ++ L  + S                
Sbjct: 66  IRWHRMRGYDTL-------WQPGQDHAGIATQMVVERELAKDPS---------------- 102

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                  ++       E +   + ++  Q+   II   LK L    D   +       + 
Sbjct: 103 -------NATRREMGREAFTAKIWEWKQQSGGTIINQ-LKRLGASCDWSRNAFTMSGAES 154

Query: 271 ----------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                       +  +  ++  +G +Y G          +    D +
Sbjct: 155 APAGEDGNFHDAVIKVFVDMYEKGLIYRGKRLVNWDPHFETAISDLE 201


>gi|311746266|ref|ZP_07720051.1| valine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576499|gb|EAZ80777.1| valine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 877

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 53/214 (24%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+       +  +    +   +        I     N TG +H+GH     + D L   
Sbjct: 8   DPATTEAKWYAYWMEHKLFSSKVDPNKEPYVITMPPPNVTGVLHMGHMLNNTIQDVLIRR 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                +  +++   +    L     D                E 
Sbjct: 68  ARMQGKNAL-------WVPGTDHASIATETKVVNLLKEQGIDKK--SLTREKFLEHAWEW 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II D LK L    D   +      G    +
Sbjct: 119 KEKYG------------------------GIILDQLKKLGASCDWDRTAFTMDEGLSDAV 154

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L ++G +Y GI         +    D +
Sbjct: 155 ISVFVDLHKKGKIYRGIRMVNWDPKGKTALSDDE 188


>gi|108757222|ref|YP_628632.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461102|gb|ABF86287.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 966

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 17/166 (10%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           GSD   G+      VA    +       L    V    DG   KMSK  G+ +    V+ 
Sbjct: 600 GSDQHRGWFHSSMLVAVGTRDMSPYKACLTHGFVV---DGQGEKMSKSRGNVVAPDKVIQ 656

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           + G++ +R  +        +      +K  S+          Y + R+  R A     D 
Sbjct: 657 QYGAEVLRLWVAASDYRNDVRLSDQILKGLSEG---------YRKIRNTVRYALSNLYDF 707

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           D     ++ +P+          L   LAE    +  A    E + +
Sbjct: 708 D---PAKHAVPEVELLPLDRWALGR-LAEVVARVRKAYEDYEFHLV 749


>gi|313678335|ref|YP_004056075.1| glutamate--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950457|gb|ADR25052.1| glutamate--tRNA ligase [Mycoplasma bovis PG45]
          Length = 463

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 110/350 (31%), Gaps = 59/350 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  L         +    +   +Q+  L  
Sbjct: 9   APSPTGYLHIGGARTALFCYLFAKHYNGSFVFRLED----TDVKRNVADGERSQLENLKW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +    +   + ++EL+           K Y   
Sbjct: 65  L-------GIIPDESPLNPNEKYGKYRQSEKLDRYREIANELVQKG-----FAYKAYDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +++   + +   I           +  +   I +           Y      PK  T 
Sbjct: 113 EELEMQHYEAEKNGIA-------SFRYDKNWLKISEEEKTRRENAGEYSIRFCMPKDTTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ R ++ F S  +GD     + KSDG  TY   + A     ++    +++   G +
Sbjct: 166 EWDDIVRGKISFNSNDIGDW---VIQKSDGYPTY---NFAVVVDDHDMEITHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R  ++  A+  K  +        + +  +    K+SKR              G 
Sbjct: 218 HITNTPRQLSIYNALGWKSPEFGH-----LTVITNMEGKKLSKRDTSLKQFIEDYKNDGY 272

Query: 420 D--------------SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
           D              S     L   N  +  FD  ++ +   +  +  +Q
Sbjct: 273 DPNAIFNFLSLLGWTSADNSELMSHNEIITKFDPARLSKSPSKFDIKKMQ 322


>gi|225850238|ref|YP_002730472.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
 gi|259511511|sp|C0QP76|SYI_PERMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225645021|gb|ACO03207.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
          Length = 947

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 113/327 (34%), Gaps = 37/327 (11%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPI 273
              L      KW+P   +  +++M++   D      ++  +   +F  +   +  D   +
Sbjct: 430 GEALKEIERVKWIPHWGENRIKSMIENRPDWCISRQRSWGVPIAVFYCKRCGNIIDDEKV 489

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            + I +L  +      I    +++          +          + D   +  D   ++
Sbjct: 490 FEHIADLVEKDEFGADIWFEREAEELLPEGYRCPKC--DGEEFKKEEDILDVWFDSGVSH 547

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +   + F  + +   D  +Y+ GSD      +   +    S  +A  + +L     L  
Sbjct: 548 ASVLKSGFWDELKWPAD--MYLEGSDQHRGWFQSSLLEGVASYGRAPYDAVLTHGFIL-- 603

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ I    ++   G+D +R  ++    +E +      +K  + +     
Sbjct: 604 DEKGNKMSKSLGNVIPPEKIIKMYGADILRLWVVSEDYTEDIKIGMNLLKSIADD----- 658

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
               Y + R+ FR       D D +   ++ +P E+  +         L++  R+I+ + 
Sbjct: 659 ----YRKIRNTFRYFLGNLYDFDAN---KDRVPYENLLEIDRW----MLSKLQRLIDRSH 707

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGR 540
            A        Y       FH  +   +
Sbjct: 708 SAYS-----NY------RFHKIYHEIK 723


>gi|217077634|ref|YP_002335352.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037489|gb|ACJ76011.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 638

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 138/412 (33%), Gaps = 80/412 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
                H+G     ++GD +A      GYEV      ++ G +I   A     +  Q L +
Sbjct: 13  VNSEPHIGSAYTTIIGDIIARYKRLMGYEVFYLTGTDEHGQKI-MQAAKKQGKTPQQLCD 71

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK---IIRDD 248
             S   E  +  + +           +   +   +E+ +  V  + V  M++   I +  
Sbjct: 72  ELSKKFEQLWKDLKIT----------NDYFIRTTDEEHIKTV-QFFVSKMLENEDIYKGK 120

Query: 249 LKALN-IQHDIFISEDDFHRGDPS-----PIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            K    +  + + SED+  + + +          ++ +  + Y +             K 
Sbjct: 121 YKGWYCVPCETYWSEDEIEKDENNNPVCPSCHRPLNFVEEENYFFRLSKYTEPLLKHFKE 180

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM 356
           + D  +  FR   +   ++  L            DL+  +  ++ G        ++IYV 
Sbjct: 181 NPDFVEPEFRKNEMLKILEEGL-----------KDLSITRTTFDWGIPMPNDPKHVIYVW 229

Query: 357 -------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-------- 395
                        G D   + K   A    + ++  + + L+   + +            
Sbjct: 230 VDALINYISAIGYGKDEETFKKWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFA 289

Query: 396 ------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                    K+SK  G+ I  R  V + G+D +R+ +         D  F K  + S+EN
Sbjct: 290 HGWLTVNGQKISKSLGNAIDPREFVKKYGNDVIRYYLAR-------DIVFGKDGDFSEEN 342

Query: 450 PVFYV--QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            V  +    A      + R    +  + D      + IP  S  + S+ +LI
Sbjct: 343 LVNRLNSDLANDYGNLLHRTLAMVVKNFD------SKIPTPSSLNESDKELI 388


>gi|198422215|ref|XP_002122808.1| PREDICTED: similar to Valyl-tRNA synthetase CG4062-PA [Ciona
           intestinalis]
          Length = 1271

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 57/197 (28%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           SP ++ +        SG    R      +  ++     N TG +H+GH   + + D    
Sbjct: 93  SPKFVERAWYEWWEKSGFFKPRKRTKDASTYSMVVPPPNITGNLHLGHALTSSLEDVFVR 152

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G E       + AG     +                               V + 
Sbjct: 153 WQRMLGNETLWVPGSDHAGIATQMV-------------------------------VERF 181

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           + +KY++       +K+   V  +      +II +  + L    D   S    +      
Sbjct: 182 IENKYNTSRTELGRKKFEEAVWIWKETKGDRII-EQFRRLGSSLDWDHSTFTLNPEYSYA 240

Query: 273 IRDIIDNLARQGYVYEG 289
           + +    L  +G +Y  
Sbjct: 241 VNEAFIRLHDEGLIYRD 257


>gi|119489561|ref|ZP_01622321.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119454473|gb|EAW35621.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 912

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             S       +       +  +    G    I     N TG +H+GH     + DTL   
Sbjct: 13  DSSTTEAKWQTYWEEKQTFKADPNHPGEPYCIMIPPPNVTGSLHMGHAFNNSLIDTL--- 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                         RY +   +N   LP   +  + +  V +  
Sbjct: 70  -----------------------------IRYHRMKGDNTLYLPGTDHASIAVHSVIERQ 100

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   +K+L    ++  Q+    I   L+ L I  D          G  + +
Sbjct: 101 LKEEGKTRFDLGRDKFLERAWEWKEQS-SGTITGQLRRLGISADWTRERFTLDEGLANAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    L   G +Y G         ++    D
Sbjct: 160 IEAFVRLYEDGLIYRGQYMVNWCPASESAVSD 191



 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 106/314 (33%), Gaps = 39/314 (12%)

Query: 213 LADKYSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
           LADK  + L N        E+W+ + +D+ V+     I   L     Q   + +  +   
Sbjct: 371 LADKALNCLDNEDNPGFVPERWMKVYRDWLVKLEDWCISRQLW-WGHQIPAWYAVSETDG 429

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
                   ++     +    +            + + D     F S +           S
Sbjct: 430 EITDNTPFVVAKTEAE--AVKKATEKFGKDVKLQQEPDVLDTWFSSGL--------WPFS 479

Query: 328 DGSYTYFAADLAYF--KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
              +    ADLA +        GFD +I+         V R+  +A    +K     V +
Sbjct: 480 TLGWPQETADLATYFPTNTLSTGFD-IIFFW-------VARMTMMAGYFMDKMPFKTVYI 531

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
             L+ L  +G   KMSK AG+ I    ++++ G+D+VR+ ++        D      +E+
Sbjct: 532 HGLI-LDENGK--KMSKTAGNGIDPLLLINKYGTDAVRYTLIKEVIGAGQDIRLEYNREK 588

Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LA 503
            +   V   +    +  +  R                    Q  + D+ +L+L     L+
Sbjct: 589 DESASVEASRNFTNKIWNASR--------FVMMNLEGKTPQQLGKPDSEKLELCDQWILS 640

Query: 504 EYPRVIENATIAQE 517
            + + ++      E
Sbjct: 641 RFHKTVKQTCEYLE 654


>gi|317123025|ref|YP_004103028.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593005|gb|ADU52301.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 973

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + +    +    +  +    G   ++     N TG +H+GH     + D LA
Sbjct: 53  RYRPQDFEEDVYRFWMEQRAFHADRDAPGPVFSMVIPPPNVTGNLHIGHALNNTMQDILA 112

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V  
Sbjct: 113 RWHRMQGDVTLWVPGTDHAGIATQHV-------------------------------VEV 141

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            LA +      +   E++L  V  +  Q    I+   L+ L    D          G   
Sbjct: 142 RLAKEEGLRRQDLGRERFLERVWAWKNQYEANILGQ-LRRLGASVDWDRLRFTMDEGCSR 200

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R++   L  +G +Y G
Sbjct: 201 AVREVFVRLYEKGLIYRG 218



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 69/215 (32%), Gaps = 40/215 (18%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  V+D+ +   +         +   +     E    R DP                  
Sbjct: 442 WLENVRDWCISRQIWWG----HRIPAWYCQRCGETVVAREDPERCPRC------------ 485

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G     + +           L   ST+   D D P L+      Y  + L         G
Sbjct: 486 GSAELHQDEDVLDTWFS-SALWPFSTLGWPDKDSPDLRR----FYPTSVLVT-------G 533

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +D +++         V R+  +            VLL  LV   RD    KMSK  G+ +
Sbjct: 534 YD-ILFFW-------VARMMVMGLEFMGDVPFRTVLLHGLV---RDAKGQKMSKSRGNVV 582

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
               V+D+ G+D++RF ++          F + + 
Sbjct: 583 DPLEVIDKYGADALRFTLVTGLAPGNDARFSWERA 617


>gi|315143639|gb|EFT87655.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 478

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|157150913|ref|YP_001449495.1| glutamyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189082173|sp|A8AUN5|SYE_STRGC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|157075707|gb|ABV10390.1| glutamyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 485

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLSVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|187918595|ref|YP_001884158.1| valyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119861443|gb|AAX17238.1| valyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 874

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 63/214 (29%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P      +    +    +  N   +     +     N TG +H+GH     + D L   
Sbjct: 10  NPKVFEDKIYQKWLDNGVFSPNDGIESRFSMVA-PPPNVTGILHMGHALNFTLQDILVRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G      +  + AG       ++    +++ L +                      
Sbjct: 69  KRMQGANTLWLFGTDHAG-------IATQAVFEKQLKD---------------------- 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
              +     +F  E+++  +     +   +II + ++ L   +D          G    +
Sbjct: 100 ---FGKSKDDFSREEFVEEIFKLKNKH-REIIVNQIEKLGASYDHSRERFTLDAGLSQAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G +Y+G         +     D +
Sbjct: 156 NKVFIDLYNKGLIYKGEYLVNLDPGSGSVVSDEE 189


>gi|323697808|ref|ZP_08109720.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457740|gb|EGB13605.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 108/324 (33%), Gaps = 43/324 (13%)

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISED-DFHRGDPSPIRDIIDNL 280
           + +W+P   +  +  M++   D      +   +     I ED D    D   + DI D  
Sbjct: 437 DVEWIPSWGEERIYNMVENRPDWCISRQRNWGVPISALICEDCDETWFDAKWVYDICDRY 496

Query: 281 ARQG----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           A+      Y +E  L     +    C     +   R T + D      +  D   +Y   
Sbjct: 497 AKHETGCDYWFEAPLEEIVPEGL-TCPKCGGKHWRRETDILD------VWFDSGTSYA-- 547

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             A  + + E  F   +Y+ GSD   G+       +    +      VL    V    D 
Sbjct: 548 --AVVEQRKETRFPADLYLEGSDQHRGWFHSSLLASVGTRDVPPYKAVLTHGYVV---DA 602

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  + ++D+ G++ +R  +      E +      +             
Sbjct: 603 EGRKMSKSIGNVLAPQEIIDKFGAEILRMWVSASNYQEDIRISDETLSRLVD-------- 654

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
            AY R R+  R         DFD   +  +      D   L ++V   +    I  A   
Sbjct: 655 -AYRRIRNTCRYLLSNLS--DFDPADKVAVADMPPLDRYALDMVVR--Q-HDAIRTAYRR 708

Query: 516 QEPYKLAFY--LYDLA-SVFHGHW 536
            E +K+  Y  L++L        +
Sbjct: 709 FEFHKV--YHTLHNLCVVDLSAFY 730


>gi|315179260|gb|ADT86174.1| isoleucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 948

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 38/303 (12%)

Query: 228 KWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           KW+P      ++ M++      I R     + I   +     + H   P  I  +   + 
Sbjct: 447 KWMPDWGQSRIEGMVEGRPEWCISRQRTWGVPIALFVHKETAELHPKTPELIEQVAQLVE 506

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++G           +      D ++ + +  +  V  D         G   Y   D    
Sbjct: 507 QKGI---QAWWDVDTAELLGADAEQYEKVLDTLDVWFDS--------GVTHYAVVD---- 551

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             +   G +  +Y+ GSD   G+ +     + A+  K     VL    V    DG   KM
Sbjct: 552 SREEFHGAEADMYLEGSDQHRGWFQSSLISSIAMKGKAPYKEVLTHGFVV---DGQGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +            
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD-----------S 656

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R I   A+    +L+      ++I  +         +   +A    ++  A      + 
Sbjct: 657 YRRIRNTARFFLANLNGFNPATDIIAADEMVALDRWAVARAMAAQQEIV-KAYAEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VVQ 718


>gi|312870209|ref|ZP_07730340.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094232|gb|EFQ52545.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 674

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 58/342 (16%), Positives = 110/342 (32%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    V  D  A     SGY+V      ++ G +I   A  +  +       
Sbjct: 17  PSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQKADKLGMQ------- 69

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  +   +   +  + L    +K++    DY  QA+ KI +  L  
Sbjct: 70  ----------PQEYVDQMADGIKKLW--KTLKITNDKFIRTTDDYHEQAVQKIFQKFLDQ 117

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S DD      S + ++  +   +   G    G       + +    M 
Sbjct: 118 GDIYKGEYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMS 177

Query: 306 RKQLLF-----RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG------FDNMIY 354
           R                +   R     +        DLA  +  +  G        +++Y
Sbjct: 178 RYADWLMKYYEEHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVY 237

Query: 355 VM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V                +D S + K   A    V ++  + + +   ++           
Sbjct: 238 VWIDALSNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKH 297

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +VD  G D+ R+ +L 
Sbjct: 298 VIGHGWLTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLR 339


>gi|307196996|gb|EFN78371.1| Valyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 881

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 55/191 (28%), Gaps = 32/191 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +                K    N+     N TG +H+GH   A + D LA      G
Sbjct: 5   WYDVWQQNKCFSSSKTRTTNKKGSFNMVLPPPNITGVLHLGHALTATIQDVLARWYKMKG 64

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V     ++ AG     +                              H  + L+    
Sbjct: 65  YSVLWIPGLDHAGIATQVIV-------------------------EKYLHHTRNLSRH-- 97

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               N   E++  +V  + V+   ++IR+ LK L    D             + + +   
Sbjct: 98  ----NLGREEFASMVWQWKVEK-AEMIRNQLKMLGANLDWDREYFTIDEHYSAAVTEAFV 152

Query: 279 NLARQGYVYEG 289
            L  +G +Y  
Sbjct: 153 QLHERGLLYRD 163


>gi|302670856|ref|YP_003830816.1| glutamyl-tRNA synthetase GltX [Butyrivibrio proteoclasticus B316]
 gi|302395329|gb|ADL34234.1| glutamyl-tRNA synthetase GltX [Butyrivibrio proteoclasticus B316]
          Length = 493

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 120/350 (34%), Gaps = 58/350 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    ++      G +        D    +      ++   +  
Sbjct: 8   APSPTGRMHVGNLRTALYAYLIS---KHEGGDYILRIEDTDQERFVEGATEIIYQTLKDT 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
              +D     G   G Y++   ++  +  +Y+ EL+   E  +     +  +  +++ I 
Sbjct: 65  GLVHDEGPDIGGPVGPYVQSERQKAGIYMQYAKELVEKGE-AYYCFCDEERLATLVQEID 123

Query: 247 D---DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           D     K +++     +             ++ ++    +G  +      P   TT   D
Sbjct: 124 DGNGGKKQISVYDKHCLHLS----------KEEVEKNLAEGKPFVIRQNNPTDGTTTFHD 173

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++   
Sbjct: 174 ELYGDVTVENKELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEYISS 225

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------- 415
             +   +  A   +  +          L  D    K+SKR+G   +   ++D        
Sbjct: 226 SPKYNRLYDAFGWEVPKYIHC-----PLITDEEHHKLSKRSGHS-SFEDLIDQGFIAEAV 279

Query: 416 ---------------EVGS--DSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                          E+ S  D ++     R N     FDF K+K  + E
Sbjct: 280 VNFVALLGWSPDDNQEIMSLEDLIKKFDYTRINKSPAVFDFTKLKWMNGE 329


>gi|282866707|ref|ZP_06275747.1| valyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282558406|gb|EFB63968.1| valyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 809

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 31  APAEVEGKLYERWVERGYFTADAASEKPPYTIVIPPPNVTGSLHLGHAFQHTLMDALTRR 90

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE             ++   ++   + +Q L                        
Sbjct: 91  KRMQGYESL-------WLPGMDHAGIATQNKVEQQLG----------------------- 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E+++  V  +  +   KI+   ++ L    D          G  + +
Sbjct: 121 --EEGKSRHDLGREEFVERVWQWKEEYGGKILGQ-MRRLGDGVDWSRERFTMDEGLSAAV 177

Query: 274 RDIIDNLARQGYVYEG 289
           + +   +   G +Y  
Sbjct: 178 QTVFKKMYDDGLIYRA 193


>gi|126731370|ref|ZP_01747177.1| glutamyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126708281|gb|EBA07340.1| glutamyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 473

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 109/345 (31%), Gaps = 64/345 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G +            Q   L +   
Sbjct: 7   RVVTRFAPSPTGFLHIGGARTALFNWLYAR-----GRD-----------GQF-LLRIEDT 49

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R +      ++ L    + G  L H G+ ++    ++      ++ L     Y   +  
Sbjct: 50  DRARSTPEATEAILKGLSWLG--LDHDGEVISQFERADRHAEVAQELLEKGAAYKCFSTQ 107

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I    +A        + +  +   DPS   D           Y   L  P+   T   
Sbjct: 108 EEIEAFREAARADGRSTLFQSPWRDADPSSQPD---------LPYVVRLKTPQDGETVIN 158

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH  
Sbjct: 159 DEVQGTVRIRNDQLD---DMVLLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHLN 210

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR----------- 411
              R   +  A+          +   + L       K+SKR G                 
Sbjct: 211 NAARQMGIYTAMGWDLP-----VYAHIPLIHGPDGKKLSKRHGALGADEYQKMGYPAAGM 265

Query: 412 ----------HVVDEVGSD--SVRFMMLWRKNSELLDFDFCKVKE 444
                     H  DE  +D  ++ +  L         FDF K++ 
Sbjct: 266 RNYLARLGWSHGDDEFFTDDQAIEWFDLNGIGKSPARFDFKKLEN 310


>gi|293364008|ref|ZP_06610744.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552498|gb|EFF41272.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 781

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
                   S     +N      K  +      P+G +H+GH R  V+GD +A      GY
Sbjct: 13  NWQKFWDESKYFEPKNDFSLPKKYILSMF-PYPSGQVHMGHVRNYVIGDAIARFYRRRGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|220924883|ref|YP_002500185.1| glutamyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219949490|gb|ACL59882.1| glutamyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 474

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 109/347 (31%), Gaps = 63/347 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A      G  + R   I D   + +T A     
Sbjct: 4   VVTRFAPSPTGFLHIGGGRTALFNWLYAR--KTGGRMLLR---IEDTDRERSTQAAI--- 55

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               A+ +  S L   +  G  +    +    +  +E L      +      Y+    + 
Sbjct: 56  ---DAILDGLSWLGLDW-DGEVVYQFARAARHQEVAESLLASGRAYRC----YATPEELA 107

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +R+  +             D    +  P    +  L            P + +T  + +
Sbjct: 108 EMREAARREGRPLRYDGRWRDRDPSEAPPGAKPVIRLRA----------PTEGETVVEDE 157

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           +  + +        D  D  LL+SDG+ TY    LA     ++ G  ++I   G +H   
Sbjct: 158 VQGRVVW----QNKDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GGEHLTN 208

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV-------- 413
             R   +  A+      +       V L       K+SKR G       R +        
Sbjct: 209 AARQTQIYEALGWAVPSMAH-----VPLIHGPDGAKLSKRHGARGVDAYRDLGYLPGALR 263

Query: 414 -----------VDEV--GSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                        E+    + +R   L +       FDF K++  + 
Sbjct: 264 NYLVRLGWSHGDQEIFSTEEMIRAFDLKQIGRSPARFDFAKLENLNG 310


>gi|45657880|ref|YP_001966.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798557|sp|Q72QT1|SYC_LEPIC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|45601121|gb|AAS70603.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 471

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 65/344 (18%), Positives = 115/344 (33%), Gaps = 46/344 (13%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
              +       +V +           H+G+ R  +  D L   +   GY V     I D 
Sbjct: 13  RKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYGVDMTMNITDI 72

Query: 171 GAQINTLALSVFWRYQQALYNNDSDL--PEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
             +I         R   A   +  +   P        LK V  E+ + Y     + PE  
Sbjct: 73  DDKI--------IRDSIASKKSIIEFTAPWTKAFFEDLKTVSAEILEHYPKATDSIPE-- 122

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                    V  + K+ +   K L  + D  +        +   +  I  +  + G  Y+
Sbjct: 123 --------MVDIIQKLQK---KGLVYEKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYD 171

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                  +   +K D+    L     + G+     L+ + G   +     A  +  Y  G
Sbjct: 172 -------TDEYEKEDVRDFVLWKSPKLEGETSWYTLVGT-GRPGWHLECSAMIRKVYGSG 223

Query: 349 FDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            D  I+  G D     H   + + E      S  K  ++        L  DG   KMSK 
Sbjct: 224 VD--IHTGGVDLLFPHHENEIAQSEGAFPEESFVKTWLHSEH-----LLVDGQ--KMSKS 274

Query: 404 AGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            G+F TLR ++ + +   ++RF+++       L+F   ++ E S
Sbjct: 275 KGNFYTLRDLIQQGLDPKAIRFLLISTHYRSKLNFSTDRIAEAS 318


>gi|304381872|ref|ZP_07364519.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304339658|gb|EFM05605.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 466

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDIVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|302024564|ref|ZP_07249775.1| glutamyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 325

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLFARHHGGTFLIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  +LL   E K          
Sbjct: 58  -----RWLGIDWDESPETHEQYRQSERL-----DIYQKYVDQLL--AEGKAYKSYVTEEE 105

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +            I      G V    L   ++  
Sbjct: 106 LAAERERQEAAGETPRYINEYLGMSE------DEKAAYIAEREAAGIVPTVRLAVNETGI 159

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     Y     ++I   G 
Sbjct: 160 YKWNDMVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDYLMKISHVIR--GD 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 213 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|209885100|ref|YP_002288957.1| glutamyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229560037|sp|B6JH82|SYE_OLICO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|209873296|gb|ACI93092.1| glutamyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 473

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 126/403 (31%), Gaps = 74/403 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G ++       D     +    ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR---KQGGKMLLRIEDTDRERSTDAAIKAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                     D ++   +      + V ++L  +       +   + L  +++ +     
Sbjct: 61  DGLNWLGIEWDGEVIYQFSRAARHREVAEQLLAE-GKAYRCYATPEELTKMREAARAEGR 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +  D         D   SE       P+ ++ +I  L            P   +T  + 
Sbjct: 120 AVRYD-----GRWRDRDPSEA------PADVKPVI-RLKA----------PQTGETVIED 157

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +  + +     +     D  LL+SDG+ TY    LA     ++ G  ++I   G DH  
Sbjct: 158 QVQGRVVWQNENLD----DLVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDHLI 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITL 410
              R + +  A+      +       + L       K+SKR G                L
Sbjct: 209 NAARQKHIYDALGWTVPTMAH-----IPLIHGPDGSKLSKRHGALGVEAYRTMGYLPAAL 263

Query: 411 RHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           R+ +  +G           S+ +    L         FDF K++  +         Y  A
Sbjct: 264 RNYLVRLGWSHGDQEIFSTSEMIEAFELSGIGRSAARFDFAKLENLNGH-------YMRA 316

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              +   +A +          P+    Q    DT+  QL+  +
Sbjct: 317 SGDAELVKAFEDI----LQFLPQGPALQAKLNDTTRAQLLQAM 355


>gi|84029562|sp|Q46XM7|SYI_RALEJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 963

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 31/249 (12%)

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTYFAADLAY 340
             L    ++  ++  ++  Q L    ++GD+ D+     D        G+  +     ++
Sbjct: 515 AELLEEVARRVEQHGIEAWQTLDPKDLLGDEADQYEKNRDTLDVWFDSGTTHWTVIRGSH 574

Query: 341 FKCKYERGFDNM------IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               Y+   D        +Y+ GSD   G+       A+ +  K     +L         
Sbjct: 575 RDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASMLYGKPPYKALLTHGF---TV 631

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ ++ + + +++G++ +R  +     S  L      +K   +      
Sbjct: 632 DGEGRKMSKSVGNTVSPQDIANKMGAEIIRLWVASTDYSGELSISDEILKRVVE------ 685

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
              +Y R R+  R       D D          +  E D   + L   L +   V+ +  
Sbjct: 686 ---SYRRIRNTLRFLLSNLSDYDHSKHALPA-SEWLEIDRYAVALTERLQK--EVLSH-Y 738

Query: 514 IAQEPYKLA 522
            + E + + 
Sbjct: 739 DSYEFHPVV 747


>gi|223040430|ref|ZP_03610704.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878280|gb|EEF13387.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 823

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       SG    ++      K  +      P+G +H+GH R   +GD LA      GY
Sbjct: 15  KWQEIWNKSGEFEPKDDYSLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKRGY 73

Query: 160 EV 161
            V
Sbjct: 74  NV 75


>gi|154354306|gb|ABS76240.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5281]
 gi|154354308|gb|ABS76241.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5282]
          Length = 130

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + + ++   V S+
Sbjct: 30  KIETLANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSVNSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVE 115


>gi|85060089|ref|YP_455791.1| valyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|84780609|dbj|BAE75386.1| valyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 951

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N   +     I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPKDIEQPLYEHWEQQGYFKPNNDTRQDSYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  Q+    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAQSG-GTITHQMRRLGDSVDWERKRFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYEEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|326577633|gb|EGE27510.1| valyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 975

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVRLYDEGLIYRG 177


>gi|294677885|ref|YP_003578500.1| glutamyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476705|gb|ADE86093.1| glutamyl-tRNA synthetase-2 [Rhodobacter capsulatus SB 1003]
          Length = 466

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 93/293 (31%), Gaps = 47/293 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +  +   + +PTG +H+G  R A+     A                   G  +  +  + 
Sbjct: 3   QKIVTRFAPSPTGYLHIGGARTALFNWLFAR---------------GHGGTFLLRIEDTD 47

Query: 182 FWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
             R      A      D     Y G  +    +  A +++                 ++ 
Sbjct: 48  RARSTPAATAAILKGLDWLGLDYDGEVVSQFDR--APRHAEVAREMLARGAAYKC--FAT 103

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q  ++  R+   A   +    + +  +   DP+   D           Y   L  P+   
Sbjct: 104 QEEIEAFRE---AARAEGRSTLFQSPWRDADPATHPDA---------PYAIRLKAPREGA 151

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  + ++  R+  +    D   L+SDG+ TY    LA     ++ G  ++I   G 
Sbjct: 152 TVIADKVQGEVTVRNDQLD---DMVCLRSDGTPTYM---LAVVVDDHDMGVTHIIR--GD 203

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           DH     R   V  A+  +     V +   + L       K+SKR G      
Sbjct: 204 DHLINAARQMQVYHAMGWE-----VPVFAHIPLIHGPDGKKLSKRHGAVGLEE 251


>gi|260771134|ref|ZP_05880061.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613731|gb|EEX38923.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 948

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 38/303 (12%)

Query: 228 KWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           KW+P      ++ M++      I R     + I   +     + H   P  I  +   + 
Sbjct: 447 KWMPDWGQSRIEGMVEGRPEWCISRQRTWGVPIALFVHKETAELHPKTPELIEQVAQLVE 506

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           ++G           +      D ++ + +  +  V  D         G   Y   D    
Sbjct: 507 QKGI---QAWWDVDTAELLGADAEQYEKVLDTLDVWFDS--------GVTHYAVVD---- 551

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             +   G +  +Y+ GSD   G+ +     + A+  K     VL    V    DG   KM
Sbjct: 552 SREEFHGAEADMYLEGSDQHRGWFQSSLISSIAMKGKAPYKEVLTHGFVV---DGQGRKM 608

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +            
Sbjct: 609 SKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD-----------S 656

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R I   A+    +L+      ++I  +         +   +A    ++  A      + 
Sbjct: 657 YRRIRNTARFFLANLNGFNPATDIIAADEMVALDRWAVARAMAAQQEIV-KAYAEYNTHA 715

Query: 521 LAF 523
           +  
Sbjct: 716 VVQ 718


>gi|237815420|ref|ZP_04594418.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790257|gb|EEP64467.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 530

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 105/336 (31%), Gaps = 28/336 (8%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           I    K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++  
Sbjct: 15  IMSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQ 74

Query: 177 LAL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            A               S F R  + L +++ D         Y        A   + ++ 
Sbjct: 75  SARKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIY 134

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNL 280
                 W  +  +         +R D      Q     ++ E+ +     +    ++D  
Sbjct: 135 KGGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLY 194

Query: 281 ARQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
               G++        +        +   + R    +   + GD+     +  D    Y  
Sbjct: 195 ENNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYIT 254

Query: 336 ADLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           A L Y     ER        +++G D    + R  AV        AQ+ +        + 
Sbjct: 255 A-LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFL 309

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 310 FNRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 345


>gi|220926267|ref|YP_002501569.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219950874|gb|ACL61266.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 903

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 34/218 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P+ +   +++       +  GR         +I     N TG +H+GH     + D 
Sbjct: 5   TFDPAAVEARIAAEWEEAQAFRAGRPDRADAAPYSIMIPPPNVTGSLHMGHALNNTLQDV 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA      G +V  +   + AG     +                               V
Sbjct: 65  LARFERLRGKDVLWQPGTDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA+    +       +++  V ++  ++    I + LK L    D          G 
Sbjct: 94  ERRLAEHQEPDRRTLGRPEFVRRVWEWKAESG-GTIVNQLKRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              +  +  +L  +G +Y            Q    D +
Sbjct: 153 SRAVIKVFVDLHAEGLIYRDKRLVNWDPKFQTAISDLE 190


>gi|163868324|ref|YP_001609533.1| methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161017980|emb|CAK01538.1| Methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 519

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 100/328 (30%), Gaps = 41/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA     +G +V      ++ G ++   A ++    QQ    
Sbjct: 14  PNGHPHIGHAYSAIASDVLARFQRLNGKKVFFLSGTDEHGLKMQQTAAALDMTPQQLADR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           N +   +           +++   +              E   + + +     ++ +   
Sbjct: 74  NSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEENGDIYLGRYTGWYSVRQEAY 133

Query: 247 DDLKALNIQHD-----------IFISEDDFHRGDPSPIRDIIDNLARQG------YVYEG 289
            + K   +  D           +  +E++ +    S     +     +            
Sbjct: 134 YEEKDTEVGPDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEYYEKHPDFIAPLERRN 193

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +        +   + R    +   +  +      +  D    Y +A   + K   +R F
Sbjct: 194 EIISFIKSGLKDISISRASFNWGVAVPENPKHVMYVWVDALTNYLSAIDFFNKNSKKRNF 253

Query: 350 ----DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                ++I   G D    H+ Y     A   +   +  +       L+         KMS
Sbjct: 254 WPANTHII---GKDIIRFHAVY---WPAFLMSAGIELPKNIFAHGFLLN-----RGAKMS 302

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +    ++D  G D VR+ +L  
Sbjct: 303 KSVGNVVDPFEMIDHYGLDQVRYFLLRE 330


>gi|82779324|ref|YP_405673.1| valyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309784109|ref|ZP_07678751.1| valyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|90108436|sp|Q328S3|SYV_SHIDS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81243472|gb|ABB64182.1| valine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|308928102|gb|EFP73567.1| valyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 951

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|317177901|dbj|BAJ55690.1| valyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 872

 Score = 47.2 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 100/322 (31%), Gaps = 44/322 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLDQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIH---RTIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                     K   G D   Y +G  H          A  + ++K  +N    E   L R
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 394 DGMPIKMSKRAGDFITLRHVVD 415
                K+ +R  +   L  + +
Sbjct: 319 LKARDKVVERLKENALLEKIEE 340


>gi|237809689|ref|YP_002894129.1| isoleucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501950|gb|ACQ94543.1| isoleucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 109/335 (32%), Gaps = 62/335 (18%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  E A      L      +W+P      ++AM++      I R     + I   +   
Sbjct: 423 FISMEQAGLRQKALSEIKGVRWIPEWGQNRIEAMVENRPDWCISRQRTWGVPIALFVHKE 482

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVG 317
               H      + ++   +  +G      L P +    +  D ++      + F S    
Sbjct: 483 TQALHPRALELMEEVAKRVEAKGIQAWWDLDPAELLGAEAADYEKVPDTLDVWFDSGSTH 542

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSE 376
             V     + +G     AAD+               Y+ GSD   G+      +  A+  
Sbjct: 543 ASVVDVRPEFNG----HAADM---------------YLEGSDQHRGWFMSSLMIGVAMKH 583

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     VL         DG   KMSK  G+ ++ + V++++G+D +R  +     +  + 
Sbjct: 584 QAPYRQVLTHGF---TVDGHGRKMSKSLGNVVSPQDVMNKLGADILRLWVASTDYTGEMT 640

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++ ++S +        AY R R+  R          F L   N    E++    E 
Sbjct: 641 VS-DEILKRSAD--------AYRRIRNTAR----------FFLANLNGFNPETDMVQPEE 681

Query: 497 QLIVHLAEYP--------RVIENATIAQEPYKLAF 523
             +V L  +           I  A    + + +  
Sbjct: 682 --MVVLDRWAVSRAKAVQEEIIAAYDNYDFHIVTQ 714


>gi|221638396|ref|YP_002524658.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|221159177|gb|ACM00157.1| Glutamyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 471

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 97/295 (32%), Gaps = 51/295 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+                    ++   G +  T  L +
Sbjct: 7   KPVVTRFAPSPTGYLHIGGGRTALF------------------NWLYARGRK-GTFLLRI 47

Query: 182 FWRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               ++      +D            +   V  + A K     +     +     K +S 
Sbjct: 48  EDTDRERSTPEATDAILRGLTWLGLDWDGEVVSQFARKDRHAEVAREMLERGAAYKCFST 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKS 296
           Q  ++  R+   A   +    +    +   DP+   D   +  +             P+S
Sbjct: 108 QEEIEAFRE---AARAEGRSTLFRSPWRDADPTSHPDAPFVIRMKA-----------PRS 153

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   D  +  + F++  +    D  +L+SDG+ TY    LA     ++ G  ++I   
Sbjct: 154 GETVIEDEVQGTVRFQNETLD---DMVVLRSDGTPTYM---LAVVVDDHDMGVTHVIR-- 205

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           G DH     R   V  A+  +     V +   + L       K+SKR G      
Sbjct: 206 GDDHLNNAARQTMVYEAMGWE-----VPVWAHIPLIHGPDGKKLSKRHGALGVEE 255


>gi|325473922|gb|EGC77110.1| valyl-tRNA synthetase [Treponema denticola F0402]
          Length = 909

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I S    +                +     N TG +HVGH     + D +    
Sbjct: 17  KEFEERIYSFWEANKCFSPIKKKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVR-- 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                         Y +   +    +P   + G+  + V ++  
Sbjct: 75  ------------------------------YHRMKGDETLWIPGTDHAGIATQSVVEKKL 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E ++  V +   +    II   L+ + +  D          G    +R
Sbjct: 105 KAEGKNRRDLGREAFIEKVWEVKNEHH-SIITKQLRKMGVSVDWDRERFTLDEGLSQAVR 163

Query: 275 DIIDNLARQGYVYEG 289
           ++  +L  QG +Y+G
Sbjct: 164 EVFVSLYEQGLIYQG 178


>gi|296112744|ref|YP_003626682.1| valyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920438|gb|ADG60789.1| valyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 975

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVRLYDEGLIYRG 177


>gi|194244995|gb|ACF35265.1| glutamyl-tRNA synthetase [Streptococcus parasanguinis]
          Length = 485

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 124/383 (32%), Gaps = 77/383 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R+  +A   +   +I+E    R +       I      G +    L   +S  
Sbjct: 109 EEELAAERERQEAAG-ETPRYINEYLGMREEEKAAY--IAEREAAGVIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   V  A+  +  +       +  +       K+SKR  + +       + G
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIEDYRKKG 274

Query: 419 --------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                                      + ++     R +     FD  K+   S E    
Sbjct: 275 YLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQKKMDWMSNE---- 330

Query: 453 YVQYAYARCRSIFRQAKDIFPDL 475
           Y++ A     +IF  AK    + 
Sbjct: 331 YIKNADL--ATIFEMAKPFLEEA 351


>gi|194290606|ref|YP_002006513.1| isoleucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|254782383|sp|B3R6E8|SYI_CUPTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193224441|emb|CAQ70452.1| isoleucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 966

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 87/269 (32%), Gaps = 42/269 (15%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVGDDV 320
            H   P  +  I   + +QG      L P +    +    ++      + F S       
Sbjct: 513 LHPRTPELLEAIAKRVEQQGIEAWQTLDPAELLGDEASQYEKNRDTLDVWFDS------- 565

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM------IYVMGSDHS-GYVKRLEAVAAA 373
                   G+  +     ++    Y+   D        +Y+ GSD   G+       A+ 
Sbjct: 566 --------GTTHWTVIRGSHRDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASM 617

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +  K     +L         DG   KMSK  G+ ++ + + +++G++ +R  +     S 
Sbjct: 618 LYGKPPYKALLTHGF---TVDGEGRKMSKSIGNTVSPQDIANKMGAEIIRLWVASTDYSG 674

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            L      +K   +         +Y R R+  R       D D          +  E D 
Sbjct: 675 ELSISDEILKRVVE---------SYRRIRNTLRFLLSNLSDYDHGKHALPAA-EWLEIDR 724

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLA 522
             + L   L +   V+ +   A E + + 
Sbjct: 725 YAVALTAQLQK--EVLSH-YEAYEFHPVV 750


>gi|42526872|ref|NP_971970.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81412332|sp|Q73MZ2|SYV_TREDE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41817187|gb|AAS11881.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 909

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I S    +                +     N TG +HVGH     + D +    
Sbjct: 17  KEFEERIYSFWEANKCFSPIKKKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVR-- 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                         Y +   +    +P   + G+  + V ++  
Sbjct: 75  ------------------------------YHRMKGDETLWIPGTDHAGIATQSVVEKKL 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E ++  V +   +    II   L+ + +  D          G    +R
Sbjct: 105 KAEGKNRRDLGREAFIEKVWEVKNEHH-SIITKQLRKMGVSVDWDRERFTLDEGLSQAVR 163

Query: 275 DIIDNLARQGYVYEG 289
           ++  +L  QG +Y+G
Sbjct: 164 EVFVSLYEQGLIYQG 178


>gi|16802283|ref|NP_463768.1| glutamyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224498917|ref|ZP_03667266.1| glutamyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224502468|ref|ZP_03670775.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254828697|ref|ZP_05233384.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254900582|ref|ZP_05260506.1| glutamyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913467|ref|ZP_05263479.1| glutamyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254937952|ref|ZP_05269649.1| glutamyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255026267|ref|ZP_05298253.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|255028573|ref|ZP_05300524.1| glutamyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|22257055|sp|Q8YAB3|SYE_LISMO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|16409602|emb|CAD00764.1| gltX [Listeria monocytogenes EGD-e]
 gi|258601101|gb|EEW14426.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610562|gb|EEW23170.1| glutamyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293591474|gb|EFF99808.1| glutamyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 491

 Score = 47.2 bits (111), Expect = 0.009,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 105/309 (33%), Gaps = 45/309 (14%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    ELL+     +   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQELLDKDL-AYKCY 111

Query: 233 VKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  + A  +  +   ++   + +      E                    QG+     
Sbjct: 112 CTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     
Sbjct: 159 FKVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A   +      +      L  +    K+SKR G  I  
Sbjct: 213 HVLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQF 265

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 266 IEQYRDLGY 274


>gi|330827959|ref|YP_004390911.1| Valyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328803095|gb|AEB48294.1| Valyl-tRNA synthetase, putative [Aeromonas veronii B565]
          Length = 950

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             + + + + L     +   +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TFNHNAIEQALYQHWEAQGYFKPHGDTSKDSFCIMIPPPNVTGSLHMGHAFQQTLMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYNRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKEESGGTITRQ-MRRLGDSVDWERERFTMDEGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L   G +Y G               D +
Sbjct: 152 AVQEVFVRLYEDGLMYRGKRLVNWDPKLNTAISDLE 187


>gi|300718544|ref|YP_003743347.1| Valyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299064380|emb|CAX61500.1| Valyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 951

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +   +     I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPHGDTRQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G   
Sbjct: 93  KIAAEEGKTRKDYGRDAFIEKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSD 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|291524913|emb|CBK90500.1| glutamyl-tRNA synthetase, bacterial family [Eubacterium rectale DSM
           17629]
 gi|291529054|emb|CBK94640.1| glutamyl-tRNA synthetase, bacterial family [Eubacterium rectale
           M104/1]
          Length = 484

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 71/404 (17%), Positives = 138/404 (34%), Gaps = 66/404 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D   Q+   + +      + 
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIA---KHEGGDFILRIEDTDQVRQVEGAVDIINRTLEET 65

Query: 188 ALYNNDSDLPEGYYPGVYL--KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L++++    +G   G Y+  + V + +  KY+ EL++  E  +        + ++   +
Sbjct: 66  GLFHDEGPDKDGG-CGPYVQSERVAQGIYMKYAKELIDKGE-AYYCFCDKERLDSLKTTV 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                ++  +H + +S            ++ I+     G  Y      P   TT   D  
Sbjct: 124 AGKEISIYDKHCLHLS------------KEEIEANLAAGKPYVIRQNNPTEGTTTFEDEI 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 172 YGDITVDNAELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEYLSSSP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVR 423
           +   +  A         V +     L  D    K+SKR G   +   ++D+  +    V 
Sbjct: 224 KYNRLYEAFGWD-----VPVYVHCPLITDEEHHKLSKRCGHS-SFEDLLDQGFLTEAIVN 277

Query: 424 FMMLWRKNSELL-----------DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           F+ L   +                FD+  + +            A      +     +  
Sbjct: 278 FVALLGWSPSDNQEIMSLPELVEKFDYHHMSKSP----------AVFDFTKLKWMNGEYI 327

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
             LDFD F    +P   E  T +  L   +A         +P +
Sbjct: 328 KKLDFDKFYEMALPYIKEVVTKDYDL-KKIARMVQTRIEIFPDI 370


>gi|283957174|ref|ZP_06374638.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791350|gb|EFC30155.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 628

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 100/322 (31%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYER 347
           G+     ++T+    +   Q       + DD     +  D  + Y ++ D        + 
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIIYVWLDALFIYISSLDFQSKGENAKF 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              + ++++G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 248 WPAH-VHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + +VD  GS++ R+ +L  
Sbjct: 303 VKPKEIVDAYGSEAFRYFLLRE 324


>gi|77457213|ref|YP_346718.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|77381216|gb|ABA72729.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   N  DL                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERQLEAQGQNRHDL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLEKVWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|291556681|emb|CBL33798.1| valyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 882

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 60/239 (25%), Gaps = 35/239 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP      L         +   +  K     I     N TG +H+GH     + D L 
Sbjct: 8   TYSPKDFEDRLYHEWEEKKYFHAEIDPKKKPYTIVIPPPNITGQLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +   A+   +  L +             
Sbjct: 68  RYKRMQGYSAL-------WLPGTDHASIATEAKIVNAMK--EEGLTKDDVGRDGFLERAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E    Y   ++                          LK L    D          G   
Sbjct: 119 EWKKVYGGRIVQQ------------------------LKKLGSSCDWDRERFTLDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            ++ +  +L  +G +Y G          +    D +            ++ PL  SDGS
Sbjct: 155 AVQKVFIDLYNKGLIYHGERIINWCPNCKTSISDIECEYEEQDSFFWHINYPL--SDGS 211


>gi|289523254|ref|ZP_06440108.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503797|gb|EFD24961.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 823

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G  Y      +     +E     P+G +H+GH R   +GD +A  +   G
Sbjct: 10  AKWQKRWEKEGTFYVNPDDKRPKFYCLEMF-PYPSGALHMGHLRNYSIGDLMARFLTMRG 68

Query: 159 YEV 161
           Y V
Sbjct: 69  YNV 71



 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 35/191 (18%)

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++IY      S +  ++ A    +  ++  +N+L   +V   +DG   KMSK  G+ +  
Sbjct: 539 HLIY------SRFFTKVLADMGMIRFREPFVNLLTQGMV--IKDGA--KMSKSKGNVVDP 588

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             ++   G+D+ R  +L+       D D     +  +          Y     ++R  +D
Sbjct: 589 DDIIKRYGADTARLFILFASPP---DKDLEWSDQGVEG--------VYRFLSRVWRYMED 637

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK-----LAFYL 525
                D        +  ES  +  +  L   +    R IE  T   E  +     +A ++
Sbjct: 638 KIE--DLKKADPARLSMESLREGKKRNLKRRI---HRTIELVTRDIEVERQFNTAVARFM 692

Query: 526 YDLASVFHGHW 536
                +F+  +
Sbjct: 693 E----LFNEMY 699


>gi|170077832|ref|YP_001734470.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169885501|gb|ACA99214.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 912

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 53/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P                +  +   KG    I     N TG +H+GH     + DT+   
Sbjct: 13  DPHNTENKWQQTWFERSVFRADPQKKGDPFCIVIPPPNVTGKLHMGHAFNTSLIDTVVRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                           +  L    +D        +  K +  E 
Sbjct: 73  HRMKG---------------------------ENVLCLPGTDHASIAVQTLVEKQIKAEG 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y     +   EK+L    ++  ++   II   LK L +  D               +
Sbjct: 106 KTRY-----DLGREKFLEKAWEWKAESGGAIINQ-LKRLGLSADWTRERFTLDENLCEAV 159

Query: 274 RDIIDNLARQGYVYEG 289
           +     L  +G +Y G
Sbjct: 160 KKAFITLYEEGLIYRG 175


>gi|192288721|ref|YP_001989326.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|238692576|sp|B3Q8A1|SYL_RHOPT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|192282470|gb|ACE98850.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 876

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    + I   RN   +     +E     P+G +H+GH R   +GD +A  M   GY
Sbjct: 14  KWQAKWDEAKIFATRNDDLRKKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGY 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|19113981|ref|NP_593069.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1351163|sp|Q09828|SYLM_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|1022354|emb|CAA91210.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 874

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 43/124 (34%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N++ +P +L    +        Y      KG K  I  +   P+G +H+GH R   + D 
Sbjct: 27  NIHSNPDFLAIAENWKSYWKSHYPFVKNDKGKKKYILSMFPYPSGLLHIGHVRVYTISDI 86

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L+      GY+V      +  G      A+          Y N   + E  Y        
Sbjct: 87  LSRYYRMKGYKVIHPMGWDAFGLPAENAAIENGISASSWTYENIKKMKEQTYHMNIYFDW 146

Query: 210 GKEL 213
            +E+
Sbjct: 147 DREI 150


>gi|300709408|ref|YP_003735222.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123091|gb|ADJ13430.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 885

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)

Query: 333 YFAADLAYFKCKYERGFDNMI---YVMGSDH-------SGYVKRLEAVAAAVSEKKAQIN 382
           Y + DL       ER  D M    YV G +H       S +  ++ A    +  ++   N
Sbjct: 502 YVSPDLDEAPFDRERANDWMPVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFRN 561

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +L   +V+L       KMSK  G+ ++ + +V+E G+D+ R  M+     E  DFD+ +
Sbjct: 562 LLAQGMVQL----EGEKMSKSKGNTVSPQRIVEEYGADTARLFMMQAAQPER-DFDWSE 615


>gi|260596293|ref|YP_003208864.1| valyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215470|emb|CBA27584.1| Valyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 951

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIEKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|220930943|ref|YP_002507851.1| glutamyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992253|gb|ACL68856.1| glutamyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 490

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 101/278 (36%), Gaps = 29/278 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            +PTG +H+G+ R A+     A      G  +       D           +    Q   
Sbjct: 10  PSPTGRIHIGNIRTALFNWLWAR---KQGGTLVLRIEDTDRERSATEFEEIIIRELQWLG 66

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            + D  + +G   G Y +    ++  KY+++LL   +  +      Y     ++ +R + 
Sbjct: 67  LDVDEGVNKGGDYGPYRQSERLDIYKKYANKLLEEDKAYYC-----YCTPEELEQMRKEA 121

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +A   +   +       R      R  +++  R+  +      P + +     D  + ++
Sbjct: 122 RARG-EMPRYNGRC---RHLTDEERKKLESEGRKPVIR--FKLPDEEQEIIVNDQIKGKV 175

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKRLE 368
            F+++++ D +   + KSDG  TY  A +       +     +  V+ G DH     +  
Sbjct: 176 SFQTSVLDDFI---IFKSDGMPTYNFAVV------IDDALMKITDVIRGEDHLSNTPKQL 226

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +  A+  +  +        + L  +    K+ KR+ D
Sbjct: 227 LLYEALGFEPPRFAH-----LPLILNKDREKLKKRSND 259


>gi|154253619|ref|YP_001414443.1| glutamyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|229470625|sp|A7HY03|SYE2_PARL1 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|154157569|gb|ABS64786.1| glutamyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 490

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 87/306 (28%), Gaps = 58/306 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G   G   I    K  I   + +PTG +H+G  R A+     A                 
Sbjct: 12  GCGAGSQEIMTEKKTVITRFAPSPTGYLHIGGARTALFNWLFAR---------------- 55

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
             G Q               L   D+D      P +     G +           F   +
Sbjct: 56  HHGGQF-------------LLRIEDTDRERSTTPAIDAIFEGLQWLGLSWDAEPVFQASR 102

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
               V+  +VQ ++             +  + S+ +          +         +   
Sbjct: 103 AARHVE--AVQELLDR--------GKAYHCYASQQELEEMREKARAEGRPIHYDGRWRDR 152

Query: 289 GILPPPKSKTTQKCDMD--RKQLLFRSTMVGDDV-------DRPLLKSDGSYTYFAADLA 339
                P               + + R  ++GD         D  LL+SDG+ TY   +L+
Sbjct: 153 DPAEAPAGVRPVVRFRSPNDGETIVRDHVMGDVRFPNEQLDDLILLRSDGTPTY---NLS 209

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                ++    ++I   G DH     R   +  A+  +  +        V L       K
Sbjct: 210 VVVDDHDMSITHIIR--GDDHLTNAARQSQIYEALGWEVPEFAH-----VPLIHGPDGAK 262

Query: 400 MSKRAG 405
           +SKR G
Sbjct: 263 LSKRHG 268


>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 911

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 104/318 (32%), Gaps = 59/318 (18%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSP 272
              +    E  WLP   +  +  M+K  R D      +   +   +F +ED     D S 
Sbjct: 420 GQMMEQIKEVNWLPAWGEVRLGNMIKD-RADWCISRQRVWGVPIPVFYAEDGEAILDESV 478

Query: 273 IRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           I  + +    +G            +  G   P       + + D   + F S        
Sbjct: 479 INHVANLFREKGSNIWFELEAEELLPAGFTHPGSPNGKFRKETDIMDVWFDS-------- 530

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERG--FDNMIYVMGSDH-SGYVKRLEAVAAAVSEKK 378
                  GS               ERG  +   +Y+ GSD   G+     +   A++ + 
Sbjct: 531 -------GSSH--------HSVLVERGLPYPADLYLEGSDQYRGWFNSSLSTGVAMTGRA 575

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               V+    V    DG   KMSK  G+ I    ++   G+D VR  +        +   
Sbjct: 576 PYKTVVSHGFV---LDGQGRKMSKSIGNVIDPLKLIKIYGADIVRLWVASVDYQADVRIS 632

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
              +K+ ++         +Y + R+ FR          FD  P   +    + +  +  +
Sbjct: 633 EDLIKQVAE---------SYRKMRNTFRFLLGNL----FDFNPETDLVAYEDLNEVDQFM 679

Query: 499 IVHLAEYPRVIENATIAQ 516
           ++ L E  + +++A    
Sbjct: 680 MIRLNELTKELKSAYEEY 697


>gi|312875953|ref|ZP_07735942.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797151|gb|EFR13491.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 920

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 100/324 (30%), Gaps = 41/324 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSP 272
              L    + KW+P      +  M+   R D      +   +   IF  ++         
Sbjct: 426 EEALKAVDDVKWVPEWGRDRIYNMIAD-RQDWCISRQRIWGVPIPIFYCKNCRKELITDE 484

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
             D I  +  +    EG          +      K  +   +    + D   +  D   +
Sbjct: 485 TIDHIAKIFEK----EGSDAWFSKDVKELLPPGAKCPVCECSEFEKETDIMDVWFDSGSS 540

Query: 333 YFAADLAYFKC-KYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +     AY    + +  +   +Y+ G+D   G+ +     A A   +     VL    V 
Sbjct: 541 H-----AYVLESREDLEWPCDMYLEGNDQYRGWFQSSLLTAVATKGRAPYKIVLTHGFVV 595

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I+   +++E G+D +R   +    +  +      +K+ ++   
Sbjct: 596 ---DGEGKKMSKSEGNVISPFDIINEFGADILRLWCVSADYTTDMRISKEIIKQLTEI-- 650

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                  Y + R+  R       D +      + +  E   +     L   L      + 
Sbjct: 651 -------YRKIRNTARFLLGNLYDFN---PKTDKVGYEDLKEIDRWAL-QRLYMLIEKVT 699

Query: 511 NATIAQEPYKLAFY--LYDLASVF 532
            A           Y  +Y L   F
Sbjct: 700 KAYEEY------DYNQVYHLVHNF 717


>gi|229547086|ref|ZP_04435811.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|312952479|ref|ZP_07771347.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229307815|gb|EEN73802.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|310629575|gb|EFQ12858.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315153507|gb|EFT97523.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155078|gb|EFT99094.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158521|gb|EFU02538.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 478

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 127/426 (29%), Gaps = 50/426 (11%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           + + ++        E       +  KV +          +H+G+ R A+  DT+     +
Sbjct: 5   WKKDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEY 64

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GYEV       D   +I   A  +     +          E        + +  + A  
Sbjct: 65  RGYEVNYVSNFTDVDDKIIKAAKELKITAPEVADRFIKAFEEDT------QALNVQPATL 118

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           +   + + P+           + A ++++ +   A  +  D++     F           
Sbjct: 119 HPRVMDHMPD-----------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQS 166

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID L        G       +   K D     L   +       D P  K    +    +
Sbjct: 167 IDELE------VGASQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECS 220

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A       +     I + G          E  +A + ++              +    
Sbjct: 221 VMAT------KHLGETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGE 274

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+FIT+  ++ +V    +RF M   +    + +    +KE +      Y +
Sbjct: 275 DDEKMSKSLGNFITVHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQK 330

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVH 501
              A     FRQA D    L  D      + +  +   +E+              +L   
Sbjct: 331 LKNAFENLRFRQA-DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKM 389

Query: 502 LAEYPR 507
           + +Y  
Sbjct: 390 MNQYSE 395


>gi|167751126|ref|ZP_02423253.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702]
 gi|167655841|gb|EDR99970.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702]
          Length = 882

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 60/239 (25%), Gaps = 35/239 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP      L         +   +  K     I     N TG +H+GH     + D L 
Sbjct: 8   TYSPKDFEDRLYHEWEEKKYFHAEIDPKKKPYTIVIPPPNITGQLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +   A+   +  L +             
Sbjct: 68  RYKRMQGYSAL-------WLPGTDHASIATEAKIVNAMK--EEGLTKDDVGRDGFLERAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E    Y   ++                          LK L    D          G   
Sbjct: 119 EWKKVYGGRIVQQ------------------------LKKLGSSCDWDRERFTLDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            ++ +  +L  +G +Y G          +    D +            ++ PL  SDGS
Sbjct: 155 AVQKVFIDLYNKGLIYHGERIINWCPNCKTSISDIECEYEEQDSFFWHINYPL--SDGS 211


>gi|158604929|gb|ABW74748.1| methionyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 644

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 102/340 (30%), Gaps = 77/340 (22%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ DTLA      G E       ++ G +I   A +                
Sbjct: 19  HIGHAYTTIIADTLARFNRLQGKETYFMTGTDEHGQKIEQAARA---------------- 62

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFP----------EEKWLPIVKDYSVQAMM--KI 244
                 G   K    E++ K+ S    F           +E+    V++   +  +   I
Sbjct: 63  -----RGKTPKEYADEISAKFRSLWDEFEISYDHFIRTTDEEHKQTVQNVFEKMQVNGDI 117

Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDP----SPIRDIIDNLARQGYV--YEGILPPPKSK 297
            + + +    +  + F ++ D    +       +  ++   +    +  YE  L      
Sbjct: 118 YKGEYEGFYCVSCETFFNQRDLLEDNRCPDCGRVTSLVKEESYFFKLSKYEDALLKWYEN 177

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-----------------------DGSYTYF 334
                    K+    S + G   D  + ++                       D    Y 
Sbjct: 178 DELCVIPKGKKNEVVSFVKGGLKDLSVTRTSFDWGIKLPKSANDDKHVMYVWLDALINYL 237

Query: 335 AADLAYFKCKYERGF-DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              L Y +      F  +  +++G D    H+ Y     A   ++     +         
Sbjct: 238 TT-LGYSRDNARMDFWPHTTHIVGKDILRFHAVY---WPAFLMSLGLPLPKHVAAHGWW- 292

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               DG   KMSK  G+ I  R V +  G ++ R+ +L  
Sbjct: 293 --TIDGE--KMSKSKGNVINPREVANAYGLENFRYFLLRE 328


>gi|116747642|ref|YP_844329.1| valyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696706|gb|ABK15894.1| valyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 892

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 52/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +         I     N TG +H+GH     + D L+      G
Sbjct: 16  ESYWYDFWEKHGYFHADERSSKPPFCIVIPPPNVTGQLHMGHALNNTLQDILSRYKRLKG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +EV                           L+   +D        V  + +  E  ++Y 
Sbjct: 76  FEV---------------------------LWLPGTDHAGIATQNVVERQLAAEGLNRYE 108

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K         II + LK L    D          G    +R++  
Sbjct: 109 LGRDAFQERVWTWKAK------YGGIIINQLKRLGASCDWERERFTMDEGLSRAVREVFV 162

Query: 279 NLARQGYVYEG 289
            L  +G +Y G
Sbjct: 163 KLYEEGLIYRG 173


>gi|326802927|ref|YP_004320745.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651090|gb|AEA01273.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 471

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 126/382 (32%), Gaps = 50/382 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 KVN+          +H+G+ R  V  D +   + + GYEV    ++++      
Sbjct: 16  HPINAGKVNMYVCGPTVYNYIHIGNARSIVAFDVIRRYLEYRGYEV---NFVSN----FT 68

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R Q+      S      Y   Y + +     DK + +           I  D
Sbjct: 69  DVDDKIIKRSQE--EGITSRQVADKYIAAYYEDI-----DKLNVKRATLNPRVLENI--D 119

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             ++ +  ++  D  A  +  D++    S   + +     I D+     R G   E +  
Sbjct: 120 AIIEFVQDLVDKDY-AYVVDGDVYYRARSFSSYGKLSDQSIDDL-----RSG-ASERVSA 172

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
             + K     D     L   +       D P       +    + ++          D +
Sbjct: 173 DEQGKKEDSVDF---ALWKAAKAGEPSWDSPWGAGRPGWHIECSVMSTRYL-----ADTL 224

Query: 353 -IYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAG 405
            I+  G+D     H     + EA        K  +N  L    V +  DG   KMSK  G
Sbjct: 225 DIHGGGADLVFPHHENERAQSEA-----RTGKTFVNYWLHNGFVTMGDDGE--KMSKSLG 277

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +F+    ++ EV    VRF +        L F    ++E  +   +  +Q A+       
Sbjct: 278 NFVLAHDLLKEVDPTIVRFFLASAHYRAPLKFSHSNLEEAQRN--LERLQTAHDNINYRL 335

Query: 466 RQAKDIFPDLDFDLFPRNVIPQ 487
           + AK+   D +  L     + +
Sbjct: 336 QDAKESLADDEKQLGELQALDE 357


>gi|315174139|gb|EFU18156.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 478

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|313902198|ref|ZP_07835606.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467533|gb|EFR63039.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 868

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N +   +  +K        G+ +      +     +E     P+G +H+GH R   +GD 
Sbjct: 10  NFH---AAEKKWRQRWAEEGLYHVEADPSRPKYYCLEMY-PYPSGKLHMGHVRNYSIGDA 65

Query: 150 LASLMAFSGYEV 161
            A      G+ V
Sbjct: 66  TARFYRMRGFNV 77


>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 911

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 104/318 (32%), Gaps = 59/318 (18%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSP 272
              +    E  WLP   +  +  M+K  R D      +   +   +F +ED     D S 
Sbjct: 420 GQMMEQIKEVNWLPAWGEVRLGNMIKD-RADWCISRQRVWGVPIPVFYAEDGEAILDESV 478

Query: 273 IRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           I  + +    +G            +  G   P       + + D   + F S        
Sbjct: 479 INHVANLFREKGSNIWFELEAEELLPAGFTHPGSPNGKFRKETDIMDVWFDS-------- 530

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERG--FDNMIYVMGSDH-SGYVKRLEAVAAAVSEKK 378
                  GS               ERG  +   +Y+ GSD   G+     +   A++ + 
Sbjct: 531 -------GSSH--------HSVLVERGLPYPADLYLEGSDQYRGWFNSSLSTGVAMTGRA 575

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               V+    V    DG   KMSK  G+ I    ++   G+D VR  +        +   
Sbjct: 576 PYKTVVSHGFV---LDGQGRKMSKSIGNVIDPLKLIKIYGADIVRLWVASVDYQADVRIS 632

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
              +K+ ++         +Y + R+ FR          FD  P   +    + +  +  +
Sbjct: 633 EDLIKQVAE---------SYRKMRNTFRFLLGNL----FDFNPETDLVAYEDLNEVDQFM 679

Query: 499 IVHLAEYPRVIENATIAQ 516
           ++ L E  + +++A    
Sbjct: 680 MIRLNELTKELKSAYEEY 697


>gi|221195624|ref|ZP_03568678.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184390|gb|EEE16783.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 537

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 109/363 (30%), Gaps = 68/363 (18%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
             P H+G   C+++ D  A     +GY+V    ++         +A +      +     
Sbjct: 19  AKP-HLGTAYCSLLCDVQARFRRAAGYDVL---FLTGMDEHGEKVAQAAAEHGMEPQAWC 74

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---- 248
           DS  P       Y K +  EL   Y   +      ++       +VQ + + +RD     
Sbjct: 75  DSQAP-------YFKDLWDELEVSYDDFIRTTEPRQY------RAVQYLWERMRDSGYIY 121

Query: 249 ---LKALN-IQHDIFISEDDFHRGDPS--------------------------PIRDIID 278
                    +  + + +E    + D                             + +  D
Sbjct: 122 KGSYDGWYCVHEETYFTETQVEKADEEQGTKGQHLCPDCHRPLERVTEESWFFKLSEFQD 181

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD- 337
            L +    +   + P       +  ++        +    D   P+   +G  TY   D 
Sbjct: 182 RLLKLYEEHPEFVEPDFRLNEVRSFVESGLQDVSVSRTSFDWGIPVPFDEGHVTYVWFDA 241

Query: 338 -------LAYFKCKYERGFDNM------IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
                  + Y     E            ++V+G D    +     A+  A+ E   +   
Sbjct: 242 LLNYYTAVGYGDDSPEAAALRARFWPAQMHVVGKDIIRFHCVIWPAMLMALGESVPERVF 301

Query: 384 LLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCK 441
               L VR    G   KMSK  G+ I    VV  +G +  R + M      E     F +
Sbjct: 302 AHGFLNVRNSETGAIEKMSKSRGNAIAPEDVVKLLGVEGYRYYFMTDVVPGEDSGISFER 361

Query: 442 VKE 444
           +++
Sbjct: 362 MEQ 364


>gi|330997405|ref|ZP_08321256.1| glutamate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570779|gb|EGG52495.1| glutamate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 505

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 100/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G E        D+   +   
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGEFIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++      D  +  G   G Y +   +++  KY  ELL+            + 
Sbjct: 57  EEYILESFRWLGIPFDEGVSFGGEHGPYRQSERRDIYKKYVQELLDAG-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               ++  R +++    Q+D   S     R   S   D ++ L  +G  Y         +
Sbjct: 112 TPEELEAKRQEIQNF--QYD--ASTRGMMRNSLSLPADEVERLLAEGRQYVVRFKIEPGE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R  ++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DIHVDDMIRGDVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVTHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A              L+ L  DG   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWADTMPKFAHLPLL-LKPDGKG-KLSKRDGD 267


>gi|293379839|ref|ZP_06625961.1| leucyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290923611|gb|EFE00492.1| leucyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 804

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++ +L      Y   ++  T   
Sbjct: 648 KNDGELDKV---YAETVKKVTEDF 668


>gi|170016518|ref|YP_001727437.1| glutamyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688943|sp|B1MWU1|SYE_LEUCK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|169803375|gb|ACA81993.1| Glutamyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 498

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 108/335 (32%), Gaps = 43/335 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A+     A    ++G  + R           +   +Q+  LA   
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGKFIIRIEDTDSARNIADGEKSQLENLAWL- 66

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  L  ++S    G Y G Y +    E  +   +  +LL           K Y   
Sbjct: 67  ------GLDWDESPEKPGEY-GPYRQSERNEQGIYQPFIDKLLTEGL-----AYKSYKTS 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R+  +A           +   R +             +G         P+ KT 
Sbjct: 115 EQLASEREAQQAAKQAPHYVYEYEGLTREER---EAKYAEFEAKGLKPVVRFRVPEEKTY 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ +  +   +  VG   D  + K+DG  TY   + A     +     +++   G D
Sbjct: 172 AWDDIVKGHIEIGAKEVG--GDWVIQKADGMPTY---NFAVVVDDHMMKISHVLR--GDD 224

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG- 418
           H     +   +  A+     Q       +  +       K+SKR  + +        +G 
Sbjct: 225 HVSNTPKQMMIFEALGWDIPQFGH----MALIINGETGKKLSKRDENVLQFVEQYKALGY 280

Query: 419 --SDSVRFMMLWRKNSELLD--FDFCKVKEQSKEN 449
                V F+ L   + +  D  F   + K+   E 
Sbjct: 281 QPQAMVNFIGLLGWSPKGEDEIFSLEEFKQMFDET 315


>gi|157415105|ref|YP_001482361.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386069|gb|ABV52384.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 628

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 100/322 (31%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKNTTILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYER 347
           G+     ++T+    +   Q       + DD     +  D  + Y ++ D        + 
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIIYVWLDALFIYISSLDFQSKGENAKF 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              + ++++G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 248 WPAH-VHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + VVD  GS++ R+ +L  
Sbjct: 303 VKPKEVVDAYGSEAFRYFLLRE 324


>gi|150019974|ref|YP_001305328.1| glutamyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|229470578|sp|A6LJ42|SYE1_THEM4 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|149792495|gb|ABR29943.1| glutamyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 473

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 104/290 (35%), Gaps = 41/290 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R     + G     L  ++ 
Sbjct: 7   APSPTGYLHVGGARTALFNFLYARKMKGSFILRIEDTDLERSQKEYEEG-----LINALK 61

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D     G   G Y +    E+  KY+ +L+           K Y V A  
Sbjct: 62  WLGLEWDEGPDV----GGDFGPYRQSERLEIYWKYARKLIEEG--------KAYEVYAYP 109

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I    + L  Q        +  +   +P  + I    ++G     I      K     
Sbjct: 110 EEIEKLREKLLAQGKAPHYTREMLQQFTTP--ERIKEYEKKGL-KPAIYFEMPRKEYVLN 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-S 361
           D+ + +++F+   VGD     +++S+G   Y   + A     +     +++   G DH S
Sbjct: 167 DIVKGRVIFKKGTVGDF---AIIRSNGVPIY---NFACVIDDHLMNITHVLR--GDDHLS 218

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             VK++ A+  A + +  +        V +       K+SKR G      
Sbjct: 219 NTVKQI-ALYEAFNWETPEFGH-----VSMILGPDAKKLSKRHGATSVEE 262


>gi|305665802|ref|YP_003862089.1| glutamyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710568|gb|EAR02800.1| glutamyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 501

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 94/282 (33%), Gaps = 28/282 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A     +G  V R   I D     N           +A
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAK--KHNGDFVLR---IED--TDQNRYVEGAEQYIVEA 62

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L   +    E        G Y +   K L  +Y+ EL+             +     +  
Sbjct: 63  LNWCNIPFDEGPGKDGGFGPYRQSERKHLYKRYAEELITKG-----KAYYAFDTSEKLDF 117

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R D +A                   S  ++        G+ Y      P+ +  +  D+
Sbjct: 118 HRKDHEAKGKTFIYNWHNRLKLENSLSLTKEETQTKLDAGHDYVVRFLTPQDQKLKLNDI 177

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R ++   + ++    D+ L KSDG  TY    LA     +     ++I   G +    +
Sbjct: 178 IRGKIEIDTNILD---DKVLFKSDGMPTYH---LANIVDDHLMEISHVIR--GEEWLPSL 229

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              + +  A   +      L   +  + +     K+SKR G+
Sbjct: 230 ALHQLLYDAFEWQAPLFAHLPLIMKPVGKG----KLSKRDGE 267


>gi|227876926|ref|ZP_03995022.1| leucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850182|ref|ZP_05555612.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047820|ref|ZP_06020770.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|227863483|gb|EEJ70906.1| leucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256713154|gb|EEU28145.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260571877|gb|EEX28448.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 804

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++ +L      Y   ++  T   
Sbjct: 648 KNDGELDKV---YAETVKKVTEDF 668


>gi|110808002|ref|YP_691522.1| valyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110617550|gb|ABF06217.1| valine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 951

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYKPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|148658611|ref|YP_001278816.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189083142|sp|A5V1W3|SYL_ROSS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148570721|gb|ABQ92866.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS   K        GI       G   +  +E     P+G +H+GH +  V+GD L 
Sbjct: 12  RFDPSIEPKWREFWAREGIFKAGRRAGAPRRYILEMF-PYPSGDLHIGHLKNYVIGDALT 70

Query: 152 SLMAFSGYEV 161
                 GY+V
Sbjct: 71  RYYVIRGYDV 80


>gi|56479511|ref|YP_161100.1| valyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81820978|sp|Q5NXL5|SYV_AZOSE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56315554|emb|CAI10199.1| valyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 68/270 (25%), Gaps = 52/270 (19%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +        G               I     N TG +H+GH     + D L       G
Sbjct: 14  ARWYPEWESRGHFDAGLDKSNPNAFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRG 73

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           +    +   + AG   QI                                  V +   D 
Sbjct: 74  FNTLWQPGTDHAGIATQI----------------------------------VVERQLDA 99

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 +   EK++  V ++   +   I R  ++ L    D          G    + + 
Sbjct: 100 KGVSRHDLGREKFVEKVWEWKEYSGGTITRQ-MRRLGTSPDWKRERFTMDEGLSKTVTET 158

Query: 277 IDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-----FRSTMVGDDVDRP 323
              L  +G +Y G         L    S      + +   L      F    VGD     
Sbjct: 159 FVRLYNEGLIYRGKRLVNWDPKLGTAVSDLEVVSEEEDGFLWHITYPFSDGPVGDLKGLT 218

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           +  +         D+A      +  + ++I
Sbjct: 219 VATT--RPETMLGDVAVMVHPEDERYAHLI 246


>gi|317504021|ref|ZP_07962028.1| glutamate--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664881|gb|EFV04541.1| glutamate--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 505

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 102/294 (34%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTGP+H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MSERKVRVRF-APSPTGPLHIGGVRTALYNYLFAR--QHGGDLVFR---IEDTDSHRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   +E+  +Y  +LL+          
Sbjct: 55  GAEEYIIESFRWLGIKFDEGVSF--GGNHGPYRQSERREIYKQYVKQLLDAG-----KAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +     ++  R ++K    Q+D         R   +  +  +D L   G  Y      
Sbjct: 108 IAFDTPEELEAKRGEIKNF--QYDAHTRLQ--MRNSLTLSKAEVDQLIADGSQYTVRFKV 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
                    D+ R +++ +S ++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPGVEIHVFDLIRGEVIVKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYQAFGWEDTMPKFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 482

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 114/346 (32%), Gaps = 48/346 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D +   +   GY+V    Y+      I  +   +  R +          
Sbjct: 45  HIGHARVMVGFDVVVRWLRHIGYDV---NYV----RNITDIDDKIINRAKD--------- 88

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G  +  +          +  N   E+     K       M+ +   L++ N+  
Sbjct: 89  -----NGESIYELTDRFIKAMHEDADNLGCERPNSEPKATDFIPQMQHLIQTLESKNLA- 142

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ------LL 310
                    ++G    +   ++N A  G + +  L   ++  +++ +++  +      +L
Sbjct: 143 ---------YQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNVETDKKNPFDFVL 193

Query: 311 FRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           ++S    +  +         G   +     A   C     FD    + G  H       E
Sbjct: 194 WKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFD----IHGGGHDLQFPHHE 249

Query: 369 -AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             +A +              +  +  DG   KMSK  G+F T+R V+ +   +++RF +L
Sbjct: 250 NEIAQSEGATGKTYANNWMHVGFINVDGE--KMSKSLGNFFTIRDVMGQFHPETIRFFIL 307

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
                  ++F    +KE        Y   A     S+   A +I  
Sbjct: 308 SSHYRSPVNFSDSALKEAQTSLTRLY--QALKSVESLTEPAGEIDE 351


>gi|227514298|ref|ZP_03944347.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087346|gb|EEI22658.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 666

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 125/345 (36%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT--------------- 176
           P+G +H+G+    V  D  A     SG++V      ++ G +I                 
Sbjct: 16  PSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQKAEKLGKDPQTYVDE 75

Query: 177 LALSVFWRYQQALYNNDSDL-PEGYYPGVYLKHVGKELADK---YSSELLNF---PEEKW 229
           +A  +   +Q+    ND  +     Y    ++ + ++L D+   Y  E + +    +E++
Sbjct: 76  MAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIYKGEYVGWYSVDDEEY 135

Query: 230 L------PIVKDYSVQ---------AMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSP 272
                   + KD + Q           +++++++     ++   D  +   D+++  P  
Sbjct: 136 FTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYADWLM---DYYKAHPDF 192

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I+      +R   + +  L P      +   + R    +   +  D      +  D    
Sbjct: 193 IQP----ESRMNEMVKNFLEP----GLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSN 244

Query: 333 YFAADLAY-----FKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
           Y  A L Y        K     D  ++++G +    H+ Y      +  A+     +   
Sbjct: 245 YITA-LGYGSDDDSLFKKYWPAD--VHMVGKEIIRFHTIY---WPIMLHALGLPLPK--H 296

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           ++       +DG   KMSK  G+ +    ++D  G D+ R+ +L 
Sbjct: 297 VIGHGWLTMKDG---KMSKSKGNVVYPETLIDRYGLDATRYYLLR 338


>gi|160916264|ref|ZP_02078471.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
 gi|158431988|gb|EDP10277.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
          Length = 446

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 109/320 (34%), Gaps = 50/320 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL   +   GY V       D   +I  +A                  
Sbjct: 38  HIGNVRPIVVFDTLKRTLQAIGYNVKMVSNYTDVDDKIIKVAKEA--------------- 82

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLN----FPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 GV  K + ++    Y+ + L+     P+          ++ A + ++ +   A 
Sbjct: 83  ------GVSEKEITEKFIKAYNEDRLSLHAMMPDAAPKVTETMDAIIAFINLLVEKGNAY 136

Query: 253 NIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
            +  D++    S DD+ +     I D++           G      SK     D      
Sbjct: 137 VVDGDVYFRVNSVDDYGKLSNQQIEDLM----------VGARIDENSKKENPLDF----T 182

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE- 368
           L++ T  G     P   S G   +    +      ++   + +I + G          E 
Sbjct: 183 LWKRTEEGIRWQSPW--SLGRPGWHTECVVMINDVFK---EPIIDIHGGGMDLKFPHHEN 237

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            +A + +     I         +  DG   KMSK  G+ I  + ++  +G + +R++ML 
Sbjct: 238 EIAQSKAAYGTAIAKYWIHNGMVNIDGE--KMSKSLGNVIWAKDMIASIGGNVLRWLMLS 295

Query: 429 RKNSELLDFDFCKVKEQSKE 448
                 L+ +   ++   KE
Sbjct: 296 THYRSPLNINEDGIETARKE 315


>gi|119953516|ref|YP_945725.1| valyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119862287|gb|AAX18055.1| valyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 874

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 62/214 (28%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P      +    +    +  N   +     +     N TG +H+GH     + D L   
Sbjct: 10  NPKVFEDRIYKKWLDNGVFIPNDGIEPKFSIVA-PPPNVTGILHMGHALNFTLQDILVRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G      +  + AG        +VF +    L  +  D         +++ +  +L
Sbjct: 69  KRMQGANTLWLFGTDHAG----IATQAVFEKQLGELGKSKDDFS----REEFVEEI-FKL 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+   ++N                         +K L   +D          G    +
Sbjct: 120 KDKHREIIVNQ------------------------IKRLGASYDHSRERFTLDAGLCQAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                +L  +G++Y+G         +     D +
Sbjct: 156 NKAFIDLYNKGFIYKGEYLVNLDPGSGSVVSDEE 189


>gi|323705639|ref|ZP_08117213.1| glutamyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535116|gb|EGB24893.1| glutamyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 485

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 96/289 (33%), Gaps = 47/289 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-SV 181
           + +PTG +H+G+ R A+     +       ++     ++TR             L    +
Sbjct: 8   APSPTGAIHIGNIRTALFNYLFSRSEGAKLILRIEDTDLTRSS------KDFEKLIFKEL 61

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSV 238
            W   +     D     G Y      H+  E A+   K       +   + L   ++ SV
Sbjct: 62  SWLGIEWDEGPDKPGEYGPYRQSERLHIYNEYAEKLIKEGKAYRCYCTPEELDKDREESV 121

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +      R D+   + +      E +             +   RQG         P   T
Sbjct: 122 K------RGDIPRYSGRCRHLTKEQE-------------EEYLRQGRKPSIRFIIPDDVT 162

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               DM + ++   S  +G D+   ++KSDG  TY   + A           ++I   G 
Sbjct: 163 ISFDDMIKGKIEINSDTLGGDM--IIVKSDGMPTY---NFAVVVDDTLMKITHVIR--GE 215

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           DH     +   +  A+  K     V     + L  D    K+SKR G+ 
Sbjct: 216 DHIYNTPKQLLIYEALGFKPP---VFAHAPLILGPDRT--KLSKRHGNT 259


>gi|313673271|ref|YP_004051382.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940027|gb|ADR19219.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 874

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +SP      +         +  +   +    +I     N TG +H+GH     + D L 
Sbjct: 9   RISPEEFESSIYREWEEKKYFHADENSQKPSYSIVIPPPNVTGSLHMGHALNNTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+E       + AG  I T  +     + + L  +D                  
Sbjct: 69  RYHKLIGFETMWIPGTDHAG--IATQNVVEKMLHSEGLTRHD------------------ 108

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          EK++  V  +  ++   IIR  LK L    D          G   
Sbjct: 109 ------------LGREKFIERVWKWKEESGGTIIRQ-LKRLGSACDWDRERFTMDEGLSR 155

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R +   L ++G +Y  
Sbjct: 156 AVRIVFVTLYKEGLIYRS 173


>gi|258648886|ref|ZP_05736355.1| glutamate--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850910|gb|EEX70779.1| glutamate--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 505

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 98/279 (35%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G  V R     D+   +      +   ++  
Sbjct: 11  APSPTGPLHIGGVRTALYNFLFAR--QHGGKLVFRIE-DTDSNRFVPGAEDYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             N D  +  G   G Y +   +E+  +Y  +LL   +  +        ++A    IR  
Sbjct: 68  GINFDEGVSFGGQYGPYRQSERREIYRRYVDQLLEEGK-AYYAFDTPEELEAKRGEIR-- 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   S   D    L ++G  Y         +     D+ R  
Sbjct: 125 ------NFQYDASTRMQMRNSLSLPADETARLLQEGVNYVVRFKIEPGEDVHVNDIIRGD 178

Query: 309 LLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L K +DG  TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKNADGLPTYH---LANIVDDHLMEISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A+  ++         L+ L  DG   K+SKR GD
Sbjct: 231 VLLYRALGWEETMPRFAHLPLL-LKPDGKG-KLSKRDGD 267


>gi|208435048|ref|YP_002266714.1| valyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432977|gb|ACI27848.1| valyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 872

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 102/324 (31%), Gaps = 48/324 (14%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  KG +  +     N TG +H+GH     + D LA      GY+   +  ++ 
Sbjct: 29  IDGNEKIQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDVLARYKRMDGYKTLYQPGLDH 88

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG     +         +    N     E      ++K V  E  +K    +L   +   
Sbjct: 89  AGIATQNVV--------EKQLLNQGIKKEDLGREEFIKKV-WEWKEKSGGAILEQMKRLG 139

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 140 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDGALSDIEVEYEERK 199

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGS 330
           G +Y         K        R + LF  + +             G  V  PL+     
Sbjct: 200 GALYYIRYYLENQKDFLVVATTRPETLFGDSALMVNPNDERYRHLVGQKVILPLIH---R 256

Query: 331 YTYFAAD------LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
                AD            K   G D   Y +G  H             + ++K  +N  
Sbjct: 257 TIPIIADEHVEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EMIKIFDEKGILNAH 309

Query: 385 LCELVRL----YRDGMPIKMSKRA 404
             E   L     RD +  ++ + A
Sbjct: 310 CGEFENLERLEARDKVVERLKENA 333


>gi|167570198|ref|ZP_02363072.1| valyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 955

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 66/233 (28%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E   +          +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGHATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI      V  R   A              GV 
Sbjct: 65  DGLVRYHRMLGHNTLWLPGTDHAGIATQI------VVERQLDA-------------QGVS 105

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              +G+E           F E  W    K+ S   +   IR     L    D        
Sbjct: 106 RHELGRE----------KFVERVWE--WKEKSGSTITGQIR----RLGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSGVVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLW 202


>gi|163750658|ref|ZP_02157895.1| isoleucyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329653|gb|EDQ00644.1| isoleucyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 940

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 114/333 (34%), Gaps = 51/333 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    + KW+P      ++ M++      I R     + I   +    ++ H    S
Sbjct: 435 KQALGEIKKTKWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSIS 494

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--- 328
            +  + + + ++G                  D+D  +LL      GD+ D+    +D   
Sbjct: 495 LMERVANKIEQKG-------------IQAWWDLDIAELL------GDEADQYRKVTDTLD 535

Query: 329 ---GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVL 384
               S + F++ +A        G D  +Y+ GSD   G+      ++ A++ K     VL
Sbjct: 536 VWFDSGSSFSSVVAARPEYQGHGID--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVL 593

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
               V    DG   KMSK  G+ I  + + +++G+D +R  +     S  +     ++ +
Sbjct: 594 THGFVV---DGKGRKMSKSVGNVIAPQTITNKLGADILRLWVAGTDYSGEMTVS-DEILK 649

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +S +        +Y R R+  R         D  +     I      D     ++   A 
Sbjct: 650 RSAD--------SYRRIRNTTRFLLANINGFDP-VKDAVAIDDMVALD---RWVVRRAAV 697

Query: 505 YPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
               I  A      + +   L    S      +
Sbjct: 698 LQEEILEAYEQYNFHTVTQKLVQFCSVELGSFY 730


>gi|73542430|ref|YP_296950.1| isoleucyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|72119843|gb|AAZ62106.1| Isoleucyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 974

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 31/249 (12%)

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTYFAADLAY 340
             L    ++  ++  ++  Q L    ++GD+ D+     D        G+  +     ++
Sbjct: 526 AELLEEVARRVEQHGIEAWQTLDPKDLLGDEADQYEKNRDTLDVWFDSGTTHWTVIRGSH 585

Query: 341 FKCKYERGFDNM------IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
               Y+   D        +Y+ GSD   G+       A+ +  K     +L         
Sbjct: 586 RDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASMLYGKPPYKALLTHGF---TV 642

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ ++ + + +++G++ +R  +     S  L      +K   +      
Sbjct: 643 DGEGRKMSKSVGNTVSPQDIANKMGAEIIRLWVASTDYSGELSISDEILKRVVE------ 696

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
              +Y R R+  R       D D          +  E D   + L   L +   V+ +  
Sbjct: 697 ---SYRRIRNTLRFLLSNLSDYDHSKHALPA-SEWLEIDRYAVALTERLQK--EVLSH-Y 749

Query: 514 IAQEPYKLA 522
            + E + + 
Sbjct: 750 DSYEFHPVV 758


>gi|184154662|ref|YP_001843002.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183226006|dbj|BAG26522.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 666

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 125/345 (36%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT--------------- 176
           P+G +H+G+    V  D  A     SG++V      ++ G +I                 
Sbjct: 16  PSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQKAEKLGKDPQTYVDE 75

Query: 177 LALSVFWRYQQALYNNDSDL-PEGYYPGVYLKHVGKELADK---YSSELLNF---PEEKW 229
           +A  +   +Q+    ND  +     Y    ++ + ++L D+   Y  E + +    +E++
Sbjct: 76  MAAGIKELWQKLEITNDKFIRTTDGYHEATVQKIFQQLLDQGDIYKGEYVGWYSVDDEEY 135

Query: 230 L------PIVKDYSVQ---------AMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSP 272
                   + KD + Q           +++++++     ++   D  +   D+++  P  
Sbjct: 136 FTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYADWLM---DYYKAHPDF 192

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I+      +R   + +  L P      +   + R    +   +  D      +  D    
Sbjct: 193 IQP----ESRMNEMVKNFLEP----GLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSN 244

Query: 333 YFAADLAY-----FKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
           Y  A L Y        K     D  ++++G +    H+ Y      +  A+     +   
Sbjct: 245 YITA-LGYGSDDDSLFKKYWPAD--VHMVGKEIVRFHTIY---WPIILHALGLPLPK--H 296

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           ++       +DG   KMSK  G+ +    ++D  G D+ R+ +L 
Sbjct: 297 VIGHGWLTMKDG---KMSKSKGNVVYPETLIDRYGLDATRYYLLR 338


>gi|15889025|ref|NP_354706.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493741|sp|Q8UEN6|SYV_AGRT5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15156816|gb|AAK87491.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 947

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 56/199 (28%), Gaps = 32/199 (16%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +    G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ANAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMENQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  V ++  ++   +I + LK L    D          G    + ++   L +Q  +
Sbjct: 111 EAFVEKVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSEAVLEVFVTLYKQNLI 169

Query: 287 YEGILPPPKSKTTQKCDMD 305
           Y+           Q    D
Sbjct: 170 YKAKRLVNWDPKLQTAISD 188



 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           L RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 583 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTL 618


>gi|333030518|ref|ZP_08458579.1| Isoleucyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741115|gb|EGJ71597.1| Isoleucyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 1141

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 29/171 (16%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V + KA  NV+   LV    D    KMSKR G+ +   H ++
Sbjct: 649 GVDQTRGWFFTLHAIATMVFDTKAYKNVISNGLV---LDKNGNKMSKRLGNGVDPFHAIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFD---FCKVKEQSKE----NPVFYVQYAYARCRSIFRQ 467
           + GSD +R+ M+   +  + L FD     +VK +          F+  YA       FR 
Sbjct: 706 KYGSDPLRWYMVTNSSPWDNLKFDEEGIDEVKRKFFGTLYNTYSFFALYANVDN---FRY 762

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            ++  P  +     R +I   +        LI         ++      EP
Sbjct: 763 QEEDIPMNERPEIDRWIISVLN-------SLIKE-------VDKCLNDYEP 799


>gi|312601123|gb|ADQ90378.1| Glutamyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 467

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 94/306 (30%), Gaps = 46/306 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         ++       +QI  L  
Sbjct: 8   APSPTGFLHIGGARTALFNYLFAKHHNGDFILRIEDSDNSRNIKD----GEKSQIENLLW 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++               G Y +    E   K + EL+           K ++  
Sbjct: 64  LGIIPDEKPGSETK--------FGPYRQSEKLERYQKLAQELIK----------KGFAYY 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A       +L+          S    +  +   I D       +   +       K+K  
Sbjct: 106 AFDNQEELELQKKEQIAKGIFSFR--YDQNWLKISDQEKQKRLKNKHFVIRFKVDKAKNF 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q+ F  + + D     ++KSDG  TY   + A     ++    ++    G +
Sbjct: 164 CWNDLVRGQICFEGSAISDW---VIIKSDGFPTY---NFAVVVDDFDMEISHI--FRGEE 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A + K  +        + +  D    K+SKR  +           G 
Sbjct: 216 HISNTPKQIGIYQAFNWKTPKFGH-----LTIITDKNGKKLSKRDKNLFQFIEDYKNQGY 270

Query: 420 DSVRFM 425
            S  F 
Sbjct: 271 HSEAFF 276


>gi|225012537|ref|ZP_03702973.1| glutamyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003514|gb|EEG41488.1| glutamyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 493

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 97/289 (33%), Gaps = 44/289 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       ++     + +R     E YI +       +
Sbjct: 8   APSPTGPLHIGGLRTALFNYLFARKEEGIFILRVEDTDQSRYVTGSENYIQETLEWCGMI 67

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D     G   G Y +   K +  +Y  +L+      +     +  
Sbjct: 68  L--------------DEGPKSGGNYGPYRQSERKAIYKEYIEKLIERGG-AYYAFDSNEE 112

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +      I  D +        + +++     +   + +    LA +G  Y   L      
Sbjct: 113 LAESRATIEKDKQTFK-----YSAKNRMSFKNSLSLTEEETKLALKGD-YVIRLKVESGN 166

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D  R  +   +  +    D+ L+KSDG  TY  A++      Y      +I   G
Sbjct: 167 MVSVHDEIRGTVRVNTDELD---DKILMKSDGMPTYHFANV---VDDYLMKISCVIR--G 218

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +    +   + +  A   +  +  + L  +++    G   K+SKR GD
Sbjct: 219 EEWLPSLPLHKLIYTAFGWETPKF-MHLPLILKPSGKG---KLSKRDGD 263


>gi|195566904|ref|XP_002107015.1| GD17218 [Drosophila simulans]
 gi|194204412|gb|EDX17988.1| GD17218 [Drosophila simulans]
          Length = 171

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIV-HLAEYPRV 508
             Y+ Y  AR  ++ R+         ++  P  + I      D  + +L+  +L  +P +
Sbjct: 57  ASYILYNSARMEALLRKFHHEVSTGAYEKLPLLDEIDFSVLEDGVDWELVYGYLLTFPEL 116

Query: 509 IENATIAQE-----PYKLAFYLYDLASVFHGHWSHGRENPRLR 546
           +E      +      + L  ++ +LA+ F   + H +   + R
Sbjct: 117 MECTMEQLDQGNCGVHLLVHFVENLAAAFSRFYYHKKVLLQKR 159


>gi|193216557|ref|YP_001999799.1| leucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001880|gb|ACF07095.1| leucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 804

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 22/191 (11%)

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVSEKK 378
            L  SDG  TY   D +  K ++E      +Y+ G +H+     Y +        +    
Sbjct: 499 ILKNSDG--TYAPLDSSEAKKRFENWLPVDLYIGGQEHAVLHLLYARFWHRFLFDIGIVP 556

Query: 379 AQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM--------MLW 428
            +     L+ + + L  DG   KMSK  G+ I    ++   G+D++R             
Sbjct: 557 TKEPFTKLINQGLILGPDGQ--KMSKSLGNVINPDDLIQTHGADALRIFEMFMGPLTDSK 614

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
             N+  LD    K  ++   N  ++V+    +  S+  +   +  +L+  +       ++
Sbjct: 615 PWNTSSLD-GIRKWLDRLYSNFNYFVK---NQKFSLSEKNDQLESNLNILIKEATDAIEK 670

Query: 489 SEFDTSELQLI 499
            +F+ +  +L+
Sbjct: 671 YKFNIAISKLM 681


>gi|149927918|ref|ZP_01916168.1| valyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823357|gb|EDM82590.1| valyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 949

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 68/236 (28%), Gaps = 33/236 (13%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ +                          I+    N TG +H+GH     + D L  
Sbjct: 7   FDPNAIESHWGPEWERQGHAKATTEEGKPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTR 66

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G+    +   + AG     +                               V ++
Sbjct: 67  YYRMRGHNTLWQPGTDHAGIATQIV-------------------------------VERQ 95

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           LA K  +   +   EK++  + ++  ++  K I + ++ +    D               
Sbjct: 96  LAAKNITRH-DLGREKFVEKIWEWKNESGSK-ITEQMRRMGASVDWQREYFTMDPALSKS 153

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           + ++   L  QG +Y G          +    D +     +     ++  PL+++D
Sbjct: 154 VTEVFVRLFEQGLIYRGKRLVNWDPVLKTAVSDLEVESVETEGHLWELKYPLVEAD 209


>gi|299782799|gb|ADJ40797.1| Methionyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 666

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 125/345 (36%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT--------------- 176
           P+G +H+G+    V  D  A     SG++V      ++ G +I                 
Sbjct: 16  PSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQKAEKLGKDPQTYVDE 75

Query: 177 LALSVFWRYQQALYNNDSDL-PEGYYPGVYLKHVGKELADK---YSSELLNF---PEEKW 229
           +A  +   +Q+    ND  +     Y    ++ + ++L D+   Y  E + +    +E++
Sbjct: 76  MAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIYKGEYVGWYSVDDEEY 135

Query: 230 L------PIVKDYSVQ---------AMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSP 272
                   + KD + Q           +++++++     ++   D  +   D+++  P  
Sbjct: 136 FTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYADWLM---DYYKAHPDF 192

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I+      +R   + +  L P      +   + R    +   +  D      +  D    
Sbjct: 193 IQP----ESRMNEMVKNFLEP----GLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSN 244

Query: 333 YFAADLAY-----FKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
           Y  A L Y        K     D  ++++G +    H+ Y      +  A+     +   
Sbjct: 245 YITA-LGYGSDDDSLFKKYWPAD--VHMVGKEIVRFHTIY---WPIILHALGLPLPK--H 296

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           ++       +DG   KMSK  G+ +    ++D  G D+ R+ +L 
Sbjct: 297 VIGHGWLTMKDG---KMSKSKGNVVYPETLIDRYGLDATRYYLLR 338


>gi|256956971|ref|ZP_05561142.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257078648|ref|ZP_05573009.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294780003|ref|ZP_06745382.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|256947467|gb|EEU64099.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256986678|gb|EEU73980.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294452897|gb|EFG21320.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 470

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVADRFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|255513529|gb|EET89795.1| cysteinyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 482

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 127/378 (33%), Gaps = 64/378 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    H+GH R  +V D +   +   GY+V                      RY Q    
Sbjct: 33  PYDDAHLGHARNYIVFDVVVRWLRHLGYDV----------------------RYIQ---- 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N +D+ +        + +  E  ++Y      F E+     VK    Q +      D   
Sbjct: 67  NITDIEDKIINRAKERGITAEELERYYE--KRFLEDMEAIGVKKNVTQYLRSHDYIDTMV 124

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDI---IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           + IQ  +       ++ D     D+   +D     G   E +          K ++    
Sbjct: 125 MQIQMLLDGGYA--YQIDSDIYYDVDKFVDYTKLSGMKLEQLKEHRIEPREGKRNVYDFA 182

Query: 309 LLFRSTMVGDDVDRPLLKSD-------GSYTYFAADLAYFKCKYERGFD------NMIYV 355
           L  + +  G+   +  L+         G   +   D A     +   +D       +I+ 
Sbjct: 183 LW-KGSKPGEPSWKIKLRIGGNEIEFVGRPGWHIEDTAMTYAVFGPQYDIHGGASELIF- 240

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                  +     A A A   K   +   +   V    +   IKMSK   +FIT+R ++ 
Sbjct: 241 ------PHHSNEIAQAEAAFGKVPFVRYWMHAGVLNVNN---IKMSKSLKNFITIREILG 291

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           +  ++++R +M+     + +++    +KE  ++     + Y Y     +   AK+   D 
Sbjct: 292 KYDAEALRLLMVSTHYRKEINYTERLIKEAQEK-----LDYMYNSM-GVLYNAKE-GNDA 344

Query: 476 DFDLFPRNVIPQESEFDT 493
           + +      +  +S F+ 
Sbjct: 345 EGNDLAEKAVKLDSRFEE 362


>gi|323703781|ref|ZP_08115419.1| glutamyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531250|gb|EGB21151.1| glutamyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 485

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 94/282 (33%), Gaps = 38/282 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+    LA    + G  + R   I D    +   +         A
Sbjct: 8   APSPTGPLHIGGARSALFNWLLAR--RYGGQFLVR---IED--TDLERSSRESEENILNA 60

Query: 189 LY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMK 243
           L     + D  +  G   G Y +    E   + + +LL            ++ + +    
Sbjct: 61  LRWLGIDWDEGIAVGGPNGPYRQTERLEKYRQVARQLLEQGHAYHCYCTEEELAAEREAL 120

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + + +L     +     +ED                L   G         P  +     D
Sbjct: 121 MAKGELPRYTGRCRNLCAEDK-------------ARLEAAGRKPVLRFKVPADRIITIDD 167

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             R  + F S  +GD +   ++KSD   TY   + A     ++    ++  V   +H   
Sbjct: 168 HVRGHVEFESNGIGDFI---IMKSDNIPTY---NFAVVVDDHDMNITHV--VRAEEHLSN 219

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             R   +  A+  +K +        + L       KMSKR G
Sbjct: 220 TPRQILLYDALGWQKPEFAH-----ISLILGKDRAKMSKRHG 256


>gi|255971591|ref|ZP_05422177.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257421384|ref|ZP_05598374.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|255962609|gb|EET95085.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257163208|gb|EEU93168.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|323479282|gb|ADX78721.1| cysteinyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 470

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVADRFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|223939187|ref|ZP_03631069.1| valyl-tRNA synthetase [bacterium Ellin514]
 gi|223892140|gb|EEF58619.1| valyl-tRNA synthetase [bacterium Ellin514]
          Length = 882

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 70/242 (28%), Gaps = 32/242 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +  +   K    +I     N TG +H+GH     + D L+   
Sbjct: 10  PQAVETKWYQFWQDNKLFVADPASKKPAYSIVIPPPNVTGILHLGHVLNNTIQDILSRKA 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G EV      + AG    T+                               V +++ 
Sbjct: 70  RMEGKEVLWLPGTDHAGIATQTM-------------------------------VERKIK 98

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +   +  +   EK+L  V ++  +    II   LK L    D               + 
Sbjct: 99  KEEGLKRYDLGREKFLERVWEWKEKHG-GIIISQLKKLGCSCDWSRERFTMDPEYSRRVA 157

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +   +L  +G +Y+G         +     D + ++     +       + +  G++   
Sbjct: 158 ETFVDLYNKGLIYKGKRMVNWCPVSLTALSDEEVIMKEQNGLLYYFKVEIAEHPGTFLTI 217

Query: 335 AA 336
           A 
Sbjct: 218 AT 219


>gi|323699073|ref|ZP_08110985.1| glutamyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459005|gb|EGB14870.1| glutamyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 465

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 70/212 (33%), Gaps = 47/212 (22%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY------ 287
           ++ S QA    I D ++ L + HD    E  F         ++ID L   G+ Y      
Sbjct: 47  RERSTQAATDAIIDSMRWLGLAHD---GEIVFQSERADRHNEVIDQLIASGHAYYCDCSK 103

Query: 288 ------------EGILPPP----KSKTTQKCDMDRKQLLFRSTMVGDDV----------- 320
                       EG  P      + K      +  K  L  +T   D V           
Sbjct: 104 EAVDAMRETAMREGRKPKYDGTCRDKGLTSGVVRLKAPLEGATGYKDMVKGFISVENAEL 163

Query: 321 -DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            D  L +SDG+ TY   +LA     ++ G  +++   G DH     R   +  A+     
Sbjct: 164 DDMILRRSDGTPTY---NLAVVVDDHDMGVTHVLR--GDDHVNNTPRQILIYRALGWDVP 218

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +        V +       K+SKR G    + 
Sbjct: 219 EFGH-----VPMILGPDKKKLSKRHGALSVME 245


>gi|303239683|ref|ZP_07326208.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592854|gb|EFL62577.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 883

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 35/202 (17%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P  +   L    +    +   +    T   I     N TG +H+GH     + 
Sbjct: 6   NIAKTYDPKQVEDRLYKEWMDKDYFHAVVDKNKTPYTIVIPPPNITGQLHMGHALDNTLQ 65

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G+                            AL+   +D          ++
Sbjct: 66  DILIRWKRMQGFS---------------------------ALWLPGTDHASIATEAKIVE 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + KE   K      +   EK+L    D+  +     I + LK L    D          
Sbjct: 99  AMAKEGIKKE-----DLGREKFLDRAWDWK-KVYGGRIVEQLKKLGSSCDWKRERFTMDE 152

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
           G    ++++   L ++  +Y G
Sbjct: 153 GLSEAVKEVFIRLYKKDLIYRG 174


>gi|257088530|ref|ZP_05582891.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|256997342|gb|EEU83862.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
          Length = 470

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|72383119|ref|YP_292474.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|90101543|sp|Q46IA7|SYV_PROMT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72002969|gb|AAZ58771.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 933

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 88/278 (31%), Gaps = 29/278 (10%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             WL  ++D+ +   +         +     I  +++      P  +    D   +    
Sbjct: 411 RDWLTDIRDWCISRQLWWG----HRIPAWFVISQTDNKVVNETPYIVARTEDEAKKLARE 466

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             G     +             L   ST+   D   P    D    Y    L        
Sbjct: 467 KYGDSVKIEQDEDVLDTWFSSGLWPFSTLGWPDETHP----DFQRWYPTNTLVT------ 516

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A   +E+    +V +  LV   RD    KMSK AG+
Sbjct: 517 -GFD-IIFFW-------VARMTMMAGVFTERMPFADVYIHGLV---RDEQNRKMSKSAGN 564

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    +++  G+D++RF ++        D      ++      V   +    +  +  R
Sbjct: 565 GIDPLLLIERYGTDALRFALVREVAGAGQDIRLDFDRKNQTSATVEASRNFANKLWNATR 624

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            A     D D++        +    D     ++  LA 
Sbjct: 625 FALINLEDQDYENLESYDSSKLQLSD---RWILSRLAR 659



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   ++     N TG +H+GH     + DT+        
Sbjct: 26  ENRWQKAWEEKGAFKPDPSAPGDPFSVVIPPPNVTGSLHMGHAFNTALIDTVVR------ 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                     Y++   NN   LP   +  + ++ + +    +  
Sbjct: 80  --------------------------YKRLKGNNVLCLPGTDHASIAVQTILERQLKEEG 113

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +     +L    ++  ++  + I D LK L    D          G    + +   
Sbjct: 114 KNRRDLGRASFLEKAWEWKEKSGGR-IVDQLKRLGYSVDWSRERFTLDEGLSKAVSEAFV 172

Query: 279 NLARQGYVYEGIL 291
            L  +G +Y G  
Sbjct: 173 RLHEKGLIYRGEY 185


>gi|322391313|ref|ZP_08064783.1| glutamate--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145739|gb|EFX41130.1| glutamate--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 525

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 49  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 102

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL   E K          
Sbjct: 103 -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLL--AEGKAYKSYVTEEE 150

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G V    L   +S  
Sbjct: 151 LAAERERQEAAGETPRYVNEYLGMSEEEK------AAYIAEREAAGIVPTVRLVVNESGI 204

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 205 YKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 257

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 258 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 307


>gi|260663709|ref|ZP_05864597.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260551760|gb|EEX24876.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 666

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 125/345 (36%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT--------------- 176
           P+G +H+G+    V  D  A     SG++V      ++ G +I                 
Sbjct: 16  PSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQKAEKLGKDPQTYVDE 75

Query: 177 LALSVFWRYQQALYNNDSDL-PEGYYPGVYLKHVGKELADK---YSSELLNF---PEEKW 229
           +A  +   +Q+    ND  +     Y    ++ + ++L D+   Y  E + +    +E++
Sbjct: 76  MAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIYKGEYVGWYSVDDEEY 135

Query: 230 L------PIVKDYSVQ---------AMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSP 272
                   + KD + Q           +++++++     ++   D  +   D+++  P  
Sbjct: 136 FTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYADWLM---DYYKAHPDF 192

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I+      +R   + +  L P      +   + R    +   +  D      +  D    
Sbjct: 193 IQP----ESRMNEMVKNFLEP----GLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSN 244

Query: 333 YFAADLAY-----FKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
           Y  A L Y        K     D  ++++G +    H+ Y      +  A+     +   
Sbjct: 245 YITA-LGYGSDDDSLFKKYWPAD--VHMVGKEIVRFHTIY---WPIILHALGLPLPK--H 296

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           ++       +DG   KMSK  G+ +    ++D  G D+ R+ +L 
Sbjct: 297 VIGHGWLTMKDG---KMSKSKGNVVYPETLIDRYGLDATRYYLLR 338


>gi|258511798|ref|YP_003185232.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478524|gb|ACV58843.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 881

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 58/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   +  +   G  +      +GT   +     N TG +H+GH     + D     
Sbjct: 11  DPKSVESRIYEVWERGGHFAPRDGARGTFSIV-MPPPNVTGVLHLGHALDTTLQDIATRF 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY        + AG       ++   R +QAL                        
Sbjct: 70  RRMQGYSTLWVPGTDHAG-------IATQARVEQALR----------------------- 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++      +   E ++  V  +  Q     I   +++L    D          G    +
Sbjct: 100 -EEEGKSRYDLGREAFVKRVWAWKEQYG-GTITSQIRSLGASCDWSRERFTMDPGLSRAV 157

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L  +G +Y G
Sbjct: 158 REVFVRLYEEGLIYRG 173



 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 92/284 (32%), Gaps = 33/284 (11%)

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG            R  +AL        EGY              D+  + +  +  E+W
Sbjct: 309 AGRFAGLSREEARARVIEALRE------EGYLVKEEPLDHAVGHCDRCGTVVEPYLSEQW 362

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              ++  +  A+ +  R +L+ L  +         F +   +     I      G+    
Sbjct: 363 FVRMEPLARDALERARRGELQFLPGRFM-----KVFEQWLTNVRDWCISRQLWWGHRIPA 417

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--------LLKSDGSYTYFAADLA-- 339
                  + +   D     L   S  V  D D             S   +     DLA  
Sbjct: 418 WYCASCGQVSVSRDDLDHCLHCGSADVKQDEDVLDTWFSSALWPFSTMGWPEHTPDLARF 477

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +++         V R+  +    + K     VLL     L RD    K
Sbjct: 478 YPTSLLVTGYD-ILFFW-------VARMVFMGVHFTGKMPFQTVLLHG---LLRDAKGQK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
           MSK  G+ I    V+D+ G+D++RFM+         L F + KV
Sbjct: 527 MSKSKGNGIDPMDVIDKYGADALRFMLASNTVLGNDLRFSWEKV 570


>gi|218281348|ref|ZP_03487826.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989]
 gi|218217440|gb|EEC90978.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989]
          Length = 641

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 110/364 (30%), Gaps = 58/364 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    ++ D +A      GY+V  +   ++ G +I   A + 
Sbjct: 11  TTAIAYTSGRP----HIGNTYEIILSDAIARFKRAQGYDVFFQTGTDEHGVKIEEKAKAA 66

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               Q+ +    + +   +        +     D +     ++  ++   I K    Q  
Sbjct: 67  GVTPQEFVDGVAAQIKSNW-------DLMNTSYDYFVRTTDDYHVKEVQSIFKRLYDQG- 118

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRG----------------DPSPIRDIIDNLARQG 284
             I +   +       + F +E     G                    ++   D L +  
Sbjct: 119 -DIYKGTYEGWYCTPCESFWTESQLVDGCCPDCGRPVKKAKEEAYFFNMQKYADRLIKYI 177

Query: 285 YVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +   + P   K            Q   + R    +   +  D      +  D    Y 
Sbjct: 178 EDHPDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALSNYI 237

Query: 335 AADLAYFKCKY-ERGFDN---MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLC 386
              L Y      +  F       +++G D    H+ Y      +  A+     +  V   
Sbjct: 238 TT-LGYHANGESDEKFKKYWPATHIIGKDILRFHTIY---WPIILMALDLPLPK-KVFGH 292

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQ 445
             +    D    KMSK  G+ I    +V+  G D+VR+  L     ++     +  V E+
Sbjct: 293 PWLLTGSD----KMSKSKGNVIYAEDLVEHFGVDAVRYYCLHEMPFAQDGTITWDLVIER 348

Query: 446 SKEN 449
              +
Sbjct: 349 INSD 352


>gi|167563008|ref|ZP_02355924.1| valyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 955

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 66/233 (28%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E   +          +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGHATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI      V  R   A              GV 
Sbjct: 65  DGLVRYHRMLGHNTLWLPGTDHAGIATQI------VVERQLDA-------------QGVS 105

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              +G+E           F E  W    K+ S   +   IR     L    D        
Sbjct: 106 RHELGRE----------KFVERVWE--WKEKSGSTITGQIR----RLGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSGVVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLW 202


>gi|308274791|emb|CBX31390.1| Isoleucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 942

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 107/347 (30%), Gaps = 70/347 (20%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKII--RDDL-----KALNIQHDIFISE----- 262
           DK      +  E   +  V D+  + +  +I  R D      +A  +   +F  E     
Sbjct: 422 DKTGLRKKSLEEIDRVKWVPDWGRERIYGMIENRPDWCVSRQRAWGVPIAVFFCEKCDTL 481

Query: 263 -------DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
                  D           DI         V EG +       T + + D   + F S +
Sbjct: 482 HINQKLADHLFELFKEHGADIWFEKEAAELVPEGSICSKCGSNTFRKETDILDVWFDSGV 541

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAV 374
                         S+        Y K       D  +Y+ GSD   G+       A   
Sbjct: 542 --------------SHAAVLEQRPYLKW----PAD--LYLEGSDQHRGWFHSSLLTAVGT 581

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             K    +VL    V    D    KMSK  G+ I  + V+D+ G++ +R  +      + 
Sbjct: 582 RGKAPYKSVLTHGFVV---DADGKKMSKSLGNVIAPKKVIDKYGAEILRLWVSASDYRDD 638

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFD 492
           +      +K+ S          AY R R+  R       D D   D    +++P+   + 
Sbjct: 639 IRISDNILKQLSD---------AYRRIRNTCRFMLGNLYDFDPAKDKVSYDLMPEIDRYA 689

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539
                 +  L+E       A    E + +          +H  +++ 
Sbjct: 690 ------LFRLSELTEKTARAYDLYEFHTI----------YHSLYNYC 720


>gi|229550658|ref|ZP_04439383.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229304224|gb|EEN70220.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 478

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 128/414 (30%), Gaps = 54/414 (13%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV    Y+++ 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEV---NYVSNF 75

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEK 228
               + +      +  + L     ++ E +        + +  + A  +   + + P+  
Sbjct: 76  TDVDDKII-----KAAKELKITPPEVAERFIKAFEEDTQALNVQPATLHPRVMDHMPD-- 128

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                    + A + ++ +   A  +  D++     F           ID L        
Sbjct: 129 ---------ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------V 172

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G       +   K D     L   +       D P  K    +    + +A       + 
Sbjct: 173 GASQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KH 226

Query: 349 FDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               I + G          E  +A + ++              +       KMSK  G+F
Sbjct: 227 LGETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNF 286

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           IT+  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQ
Sbjct: 287 ITVHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQ 342

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           A D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 343 A-DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|218290828|ref|ZP_03494897.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239186|gb|EED06387.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 881

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 58/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   +  +   G  +      +GT   +     N TG +H+GH     + D     
Sbjct: 11  DPKSVESRIYEVWERGGHFAPRDGARGTFSIV-MPPPNVTGVLHLGHALDTTLQDIATRF 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY        + AG       ++   R +QAL                        
Sbjct: 70  RRMQGYSTLWVPGTDHAG-------IATQARVEQALR----------------------- 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++      +   E ++  V  +  Q     I   +++L    D          G    +
Sbjct: 100 -EEEGKSRYDLGREAFVKRVWAWKEQYG-GTITSQIRSLGASCDWSRERFTMDPGLSRAV 157

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L  +G +Y G
Sbjct: 158 REVFVRLYEEGLIYRG 173



 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 92/284 (32%), Gaps = 33/284 (11%)

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG            R  +AL        EGY              D+  + +  +  E+W
Sbjct: 309 AGRFAGLSREEARERVVEALRE------EGYLVKEETLDHAVGHCDRCGTVVEPYLSEQW 362

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
              ++  +  A+ +  R +L+ L  +         F +   +     I      G+    
Sbjct: 363 FVRMEPLARDALERARRGELRFLPDRFM-----KVFEQWLTNVRDWCISRQLWWGHRIPA 417

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--------LLKSDGSYTYFAADLA-- 339
                  + +   D     L   S  V  D D             S   +     DLA  
Sbjct: 418 WYCASCGQVSVSRDDLDHCLHCGSADVKQDEDVLDTWFSSALWPFSTMGWPEHTPDLARF 477

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           Y       G+D +++         V R+  +    + K     VLL     L RD    K
Sbjct: 478 YPTSLLVTGYD-ILFFW-------VARMVFMGVHFTGKMPFQTVLLHG---LLRDAKGQK 526

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
           MSK  G+ I    V+D+ G+D++RFM+         L F + KV
Sbjct: 527 MSKSKGNGIDPMDVIDKYGADALRFMLASNTVLGNDLRFSWEKV 570


>gi|212633773|ref|YP_002310298.1| valyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212555257|gb|ACJ27711.1| Valyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 971

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQSLYQNWEEKGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      +   E ++  + D+  ++   I +  L+ L    D          G   
Sbjct: 93  KVAAEEGLNRHDLGRENFIDRIWDWKNESGGTITKQ-LRRLGASVDWDRERFTMDEGMSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|94968356|ref|YP_590404.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550406|gb|ABF40330.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 856

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 1/71 (1%)

Query: 92  YLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P  + +            Y         K  +  +   P+G +H+GH R   +GD L
Sbjct: 19  RYDPRAIEEKWTVQWANDPELYASEPDSAKKKFYVLEMLPYPSGALHMGHVRNYAIGDAL 78

Query: 151 ASLMAFSGYEV 161
           A  M  +G+ V
Sbjct: 79  ARFMWMTGHNV 89


>gi|86747511|ref|YP_484007.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123099264|sp|Q2J364|SYL_RHOP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86570539|gb|ABD05096.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 874

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    + I   RN   +     +E     P+G +H+GH R   +GD +A  M   G+
Sbjct: 14  KWQAKWDEAKIFATRNDDPRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGH 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|114562094|ref|YP_749607.1| valyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114333387|gb|ABI70769.1| valyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 968

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 57/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPKSIEQALYQNWEEQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RFERMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V D+  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKTRHDLGRDAFIDKVWDWKEQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYDDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|109947830|ref|YP_665058.1| valyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109715051|emb|CAK00059.1| valS [Helicobacter acinonychis str. Sheeba]
          Length = 872

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 105/324 (32%), Gaps = 44/324 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D LA      GY+   +  ++ AG     + 
Sbjct: 38  KGKRFCLMMPPPNVTGVLHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQNVV 97

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                   +    N     E      ++K V  E  +K    +L   +   +      + 
Sbjct: 98  --------EKQLLNQGIKKEDLGREEFIKRV-WEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIKYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPL------LKSDGSYTY 333
               K        R + LF  + +             G  V  PL      + +D    +
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLINRKIPIIAD---LH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +      K   G D   Y +G  H          A  + ++K  +N    E   L R
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 394 DGMPIKMSKRAGDFITLRHVVDEV 417
                K+ ++  +   L  + + V
Sbjct: 319 LEARDKVVEKLKECTLLEKIEEHV 342


>gi|170723401|ref|YP_001751089.1| valyl-tRNA synthetase [Pseudomonas putida W619]
 gi|169761404|gb|ACA74720.1| valyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 58/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGESYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +   +   + AG     L                               V ++L 
Sbjct: 65  RMQGRDTLWQPGTDHAGIATQML-------------------------------VERQLE 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   + +L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  AK-GQNRHDLGRDAFLDKVWEWKEQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|91794218|ref|YP_563869.1| valyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716220|gb|ABE56146.1| valyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 968

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 57/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPKSIEQALYQNWEEQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLT 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V D+  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKTRHDLGRDAFIDKVWDWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYDDELIYRGKRLVNWDPKLHTAISDLE 187


>gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 606

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
              V   +E  +          +E     P+G +H+GH R   +GD +A  + F GY V
Sbjct: 13  WQRVWEELELFKAHDEGKKVYVLEMF-PYPSGRIHMGHVRNYTIGDVVARFLRFKGYRV 70


>gi|316933936|ref|YP_004108918.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601650|gb|ADU44185.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 473

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 105/307 (34%), Gaps = 54/307 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT--LA 178
           T+  +   + +PTG +H+G  R A+     A      G  + R   I D   Q +T    
Sbjct: 2   TRPVVTRFAPSPTGFLHIGGGRTALFNWLYAR--KHGGTMLLR---IEDTDRQRSTQEAI 56

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            ++    +    + D D    +      + V ++L          +   + L  ++D + 
Sbjct: 57  DAILDGLKWLGIDWDGDTVYQFARAARHREVAEQLLA-AGKAYRCYATAEELAAMRDKAR 115

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 + D         D   SE       P  ++  I  L            P   +T
Sbjct: 116 AEGRAKLYD-----GTWRDRDPSEA------PEGVKPTI-RLKA----------PLTGET 153

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             +  +  +       +     D  LL+ DG+ TY    LA     ++ G  ++I   G 
Sbjct: 154 VIEDQVQGRVAWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHVIR--GD 204

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     R + +  A++ +   + V+    +    DG   K+SKR G           +G
Sbjct: 205 DHLINAARQKQIYDAMAWE---LPVMAHIPLIHGPDG--SKLSKRHG----------ALG 249

Query: 419 SDSVRFM 425
            D+ R M
Sbjct: 250 VDAYRAM 256


>gi|254497733|ref|ZP_05110506.1| isoleucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254353026|gb|EET11788.1| isoleucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 914

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 31/243 (12%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLLKSDGSYTYFAADLAY 340
           ++ +  L   +S      +MD+ +LL         + D +D  L   D   T+F      
Sbjct: 475 FIEQVALRIEESGIDAWFEMDKAELLGDDAPLYDKINDTMDVWL---DSGVTHFCV---- 527

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            K   E  F   IY  GSD   G+       + A+    A   ++L     +  +G   K
Sbjct: 528 LKQNNELAFPADIYFEGSDQHRGWFNSSLTTSVAM-YGVAPYKMVLTHGYTVDAEGR--K 584

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           +SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY 
Sbjct: 585 LSKSKGNYVALDQMVNQHGADILRLWVASTDYRHEVSISDEIIKRNAD---------AYR 635

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEP 518
           R R+  R          FD  P   +  +   +  +  +    L +    I  A  + + 
Sbjct: 636 RIRNTARFLLANL----FDFAPAEAVQADELLELDKWAIKRCQLLQ--EEIIAAYESYQF 689

Query: 519 YKL 521
           + +
Sbjct: 690 HVI 692


>gi|122921441|pdb|2O5R|A Chain A, Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec
           6.1.1.17) (Glutamate-Trna Ligase 1) (Glurs 1) (Tm1351)
           From Thermotoga Maritima At 2.5 A Resolution
          Length = 481

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 101/287 (35%), Gaps = 47/287 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  +  +         REY           L  
Sbjct: 19  APSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLERSEREY--------EEKLXE 70

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W     L++   D+  G   G Y +    E+  +++  L+           K Y V 
Sbjct: 71  SLRW--LGLLWDEGPDV--GGDHGPYRQSERVEIYREHAERLVKEG--------KAYYVY 118

Query: 240 AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           A  + I +  + L  +      S++ F + D    R        +G     +      K 
Sbjct: 119 AYPEEIEEXREKLLSEGKAPHYSQEXFEKFDTPERRR---EYEEKGL-RPAVFFKXPRKD 174

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ + +++F++  +GD     + +S+G  TY   + A           ++I   G 
Sbjct: 175 YVLNDVVKGEVVFKTGAIGDF---VIXRSNGLPTY---NFACVVDDXLXEITHVIR--GD 226

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           DH     R  A+  A  +       +      L  DG   K+SKR G
Sbjct: 227 DHLSNTLRQLALYEAFEKAPPVFAHVS---TILGPDGK--KLSKRHG 268


>gi|27379586|ref|NP_771115.1| valyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81737134|sp|Q89LR8|SYV_BRAJA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27352738|dbj|BAC49740.1| valyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 958

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 51/177 (28%), Gaps = 32/177 (18%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
           GR          I     N TG +H+GH     + D L       G +V  +   + AG 
Sbjct: 28  GRPDRRDAVPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGI 87

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
               +                               V ++L ++          EK+L  
Sbjct: 88  ATQMV-------------------------------VERQLMERQQPGRREMGREKFLER 116

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           V  +  ++   II   LK L    D          G    +  +   L R G +Y+ 
Sbjct: 117 VWQWKAESGDTIINQ-LKRLGASCDWSRERFTMDEGLSKAVIKVFVELHRDGLIYKD 172



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     ++     + +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFMKEVPFSTIYIHALV---RDEKGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   H++DE G+D++RF +
Sbjct: 579 VIDPLHLIDEYGADALRFTL 598


>gi|124026858|ref|YP_001015973.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961926|gb|ABM76709.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 933

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 88/278 (31%), Gaps = 29/278 (10%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             WL  ++D+ +   +         +     I  +++      P  +    D   +    
Sbjct: 411 RDWLTDIRDWCISRQLWWG----HRIPAWFVISQTDNKVVNETPYIVARTEDEAKKLARE 466

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             G     +             L   ST+   D   P    D    Y    L        
Sbjct: 467 KYGDSVKIEQDEDVLDTWFSSGLWPFSTLGWPDETHP----DFQRWYPTNTLVT------ 516

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A   +E+    +V +  LV   RD    KMSK AG+
Sbjct: 517 -GFD-IIFFW-------VARMTMMAGVFTERMPFADVYIHGLV---RDEQNRKMSKSAGN 564

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    +++  G+D++RF ++        D      ++      V   +    +  +  R
Sbjct: 565 GIDPLLLIERYGTDALRFALVREVAGAGQDIRLDFDRKNQTSATVEASRNFANKLWNATR 624

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            A     D D++        +    D     ++  LA 
Sbjct: 625 FALINLEDQDYENLESYDSSKLQLSD---RWILSRLAR 659



 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 33/193 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   ++     N TG +H+GH     + DT+        
Sbjct: 26  ENRWQKAWEEKGAFKPDPSAPGDPFSVVIPPPNVTGSLHMGHAFNTALIDTVVR------ 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                     Y++   NN   LP   +  + ++ + +    +  
Sbjct: 80  --------------------------YKRLKGNNVLCLPGTDHASIAVQTILERQLKEEG 113

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +     +L    ++  ++  + I D LK L    D          G    + +   
Sbjct: 114 KNRRDLGRASFLEKAWEWKEKSGGR-IVDQLKRLGYSVDWSRERFTLDEGLSKAVSEAFV 172

Query: 279 NLARQGYVYEGIL 291
            L  +G +Y G  
Sbjct: 173 RLHEKGLIYRGEY 185


>gi|315023136|gb|EFT36149.1| Valyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 872

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 82/230 (35%), Gaps = 25/230 (10%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDII 277
           E++   E K+ P     + +  M+ IRD     NI   ++  +    ++ G+      ++
Sbjct: 371 EVVMNDEIKFYPDKFKNTYKYWMENIRD----WNISRQLWWGQQIPAYYYGE-GENDFVV 425

Query: 278 DNLARQ--GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              A +      E    P       K D D     F S +       P+   DG     +
Sbjct: 426 AENAEKALELAREKAQNPNLGLADLKQDEDALDTWFSSWLW------PMSVFDGLLNPNS 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++ Y+    +        V G D   +      + A +  +  ++         + RD 
Sbjct: 480 KEINYYYPTTDL-------VTGPD-IIFFWVARMIMAGLEWR-GKVPFKNVYFTGIVRDK 530

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFCKVKE 444
              KMSK  G+      ++D+ G+DSVR  ++L       L FD   + +
Sbjct: 531 QRRKMSKSLGNSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQ 580


>gi|313206180|ref|YP_004045357.1| valyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445496|gb|ADQ81851.1| valyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336375|gb|ADZ12649.1| Valyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 872

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 82/230 (35%), Gaps = 25/230 (10%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDII 277
           E++   E K+ P     + +  M+ IRD     NI   ++  +    ++ G+      ++
Sbjct: 371 EVVMNDEIKFYPDKFKNTYKYWMENIRD----WNISRQLWWGQQIPAYYYGE-GENDFVV 425

Query: 278 DNLARQ--GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
              A +      E    P       K D D     F S +       P+   DG     +
Sbjct: 426 AENAEKALELAREKAQNPNLGLADLKQDEDALDTWFSSWLW------PMSVFDGLLNPNS 479

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            ++ Y+    +        V G D   +      + A +  +  ++         + RD 
Sbjct: 480 KEINYYYPTTDL-------VTGPD-IIFFWVARMIMAGLEWR-GKVPFKNVYFTGIVRDK 530

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFCKVKE 444
              KMSK  G+      ++D+ G+DSVR  ++L       L FD   + +
Sbjct: 531 QRRKMSKSLGNSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQ 580


>gi|296139191|ref|YP_003646434.1| valyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027325|gb|ADG78095.1| valyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 893

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 68/240 (28%), Gaps = 42/240 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   + +  V    +  +        ++     N TG +H+GH     + D L   
Sbjct: 17  DPGAVEGEIYNGWVDAGYFTADSSSPKPAFSVVLPPPNVTGSLHLGHALDQTITDALCRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV             +   ++     ++ L             G   + +G+E 
Sbjct: 77  KRMQGYEVL-------WLPGTDHAGIATQSLVEKQLTAE----------GTSRREIGRE- 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F    W    K+ S   +   +R     + +  D          G    +
Sbjct: 119 ---------QFLARAW--AFKEASHGNITGQMR----RIGVGIDWSRERFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   L   G +Y        S   Q           ++D + + FR   + DD    +
Sbjct: 164 QTIFKQLFDAGLIYRAERLVNWSPVLQTGISDLEVDHKEVDGELVSFRYGSLNDDEPHIV 223


>gi|224438465|ref|ZP_03659389.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144898|ref|ZP_07807091.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129929|gb|EFR47546.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 826

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            ++          +       K  K  +      P+G +H+GH R   +GD LA     S
Sbjct: 14  WQEFWQENHSFEPDSISLDSNKQKKYILSMF-PYPSGAIHMGHVRNYCIGDALARHYRKS 72

Query: 158 GYEV 161
           GY V
Sbjct: 73  GYNV 76


>gi|218439673|ref|YP_002378002.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226735050|sp|B7K7T8|SYC_CYAP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218172401|gb|ACK71134.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 486

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 115/336 (34%), Gaps = 48/336 (14%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
             +E G+  +        ++         H+GH R  +V D +   + + GY+V    YI
Sbjct: 17  EPLEPGKVRMYCCGITVYDYC--------HLGHARTCLVWDVVRRYLQWRGYQVQ---YI 65

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
            +    I+   L+   +   ++ +      + Y+  +   H+  + AD Y          
Sbjct: 66  QNF-TDIDDKILNRARKEGTSMEDVSERFIKAYFEDMDRLHI--QKADAYPRATHTLDG- 121

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                +K    +   K       A     D++ S   F        R  +++L       
Sbjct: 122 -----IKRLVYELEQKGY-----AYPADGDVYYSVRSFSDYGKLSGRK-LEDLQAGA--- 167

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
            G +    S++ +K D     L   +       + P     G   +     A  + +   
Sbjct: 168 SGRVDLEDSESQKKKDPFDFALWKAAKPGEPSWESPWGL--GRPGWHIECSAMVRERLGE 225

Query: 348 GFDNMIYVMGSD-----HSGYVKRLEAV-AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
             D  I+V GSD     H   + + EA     ++        +   +V++       KMS
Sbjct: 226 TID--IHVGGSDLIFPHHENEIAQSEAATGKPLARYW-----MHNGMVKVG----GEKMS 274

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K  G+F T+R ++ +    +VR  +L       LDF
Sbjct: 275 KSLGNFTTIRDLLAQFDPMAVRLFILQTHYRNPLDF 310


>gi|113969474|ref|YP_733267.1| valyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113884158|gb|ABI38210.1| valyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 958

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKSRHDLGRDAFMEKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|330811519|ref|YP_004355981.1| Valine--tRNA ligase (Valyl-tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379627|gb|AEA70977.1| Valine--tRNA ligase (Valyl-tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 67/243 (27%), Gaps = 37/243 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   N  DL                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGQNRHDL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  V ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLEKVWEWKDESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           +    L   G +Y G               D +           ++  PL  +DG+ T  
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGFLWNLKYPL--ADGAKTAE 209

Query: 335 AAD 337
             D
Sbjct: 210 GKD 212


>gi|307276290|ref|ZP_07557417.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306507033|gb|EFM76176.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315149012|gb|EFT93028.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315168265|gb|EFU12282.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 478

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVADRFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|170693571|ref|ZP_02884729.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141353|gb|EDT09523.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 945

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 104/306 (33%), Gaps = 37/306 (12%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQAGIEAWQTLDPRELLGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D++   R V     E D   + L  +L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYEKNARPV-EDWLEIDRYAVALSANLQ--NDIL 720

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            +     E + +   L    S    G +    ++ RL    A++      +  L H    
Sbjct: 721 SH-YDKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYH---- 774

Query: 569 IINSGL 574
            I  GL
Sbjct: 775 -IAQGL 779


>gi|318040771|ref|ZP_07972727.1| valyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 935

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 80/248 (32%), Gaps = 47/248 (18%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +A A + +    +V +  LV   RD    KMSK AG+
Sbjct: 514 TGFD-IIFFW-------VARMTMMAGAFTGQMPFQDVYIHGLV---RDENNRKMSKSAGN 562

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    ++D  G+D++RF ++        D      ++      V   +    +  ++ R
Sbjct: 563 GIDPLLLIDRYGADALRFALVREVAGAGQDIRLDYDRKSDTSATVEASRNFANKLWNVTR 622

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFY 524
            A                     E D + LQL     L+   RV               Y
Sbjct: 623 FALMN--------LDGETPASLGEPDPAALQLADRWILSRLARVNRETAERYG-----NY 669

Query: 525 --------LYDLASVFHGHWSHGRENPRLRF-----VQAN-NRKLTMMRLQLVHAVASII 570
                   LY+ A      W+   +           V A+ +       L        ++
Sbjct: 670 GLGEAAKGLYEFA------WNEVCDWYVELIKRRLQVPADLDGAAREAALADQRTARQVL 723

Query: 571 NSGLN-II 577
              LN ++
Sbjct: 724 AKALNELL 731


>gi|312828985|emb|CBX33827.1| methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 657

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I            Q    
Sbjct: 15  PSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKI--------QEKAQKAGK 66

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            + +  +    G+       E++   + + +   EE+   +V+               + 
Sbjct: 67  TEIEYLDEMIAGIKQLWAKLEIS---NDDFIRTTEERHKHVVEQV------------FER 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIR----DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L  Q DI++ E +     P         ++D     G +   I         +   +  +
Sbjct: 112 LLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKI---IGGKSPDSGHEVELVKEE 168

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERGFD 350
              F  +      DR L   D +  +                   ADLA  +  +  G  
Sbjct: 169 SYFFNISKY---TDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVH 225

Query: 351 ------NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +++YV                 D S + +   A    ++++  + + ++  ++ 
Sbjct: 226 VPSNPKHVVYVWIDALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILL 285

Query: 391 LYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  D                  KMSK   + +    ++D  G D+ R+ ++  
Sbjct: 286 MALDLPLPKKVFAHGWILMKDGKMSKSKSNVVDPNILIDRYGLDATRYYLMRE 338


>gi|304413765|ref|ZP_07395209.1| isoleucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283856|gb|EFL92250.1| isoleucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 19/173 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IY+ GSD   G+      +A A+  K     VL         DG   KMSK  G+ I+ +
Sbjct: 558 IYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGF---TVDGKGRKMSKSIGNTISPQ 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G D +R  +     S  +     ++  +S +        AY R R+  R     
Sbjct: 615 DVTNKLGGDILRLWVASTDYSREIAVS-DEILRRSAD--------AYRRIRNTARFLLAN 665

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV-IENATIAQEPYKLAF 523
                FD     +  QE         +    A+  +V I  A    + +++  
Sbjct: 666 LKG--FDPTQHQLAAQEMIVLDR-WAVGR--AQEAQVEIITAYENYDFHRVVQ 713


>gi|16332082|ref|NP_442810.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501067|sp|Q55522|SYV_SYNY3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1001391|dbj|BAA10881.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 910

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+       +       +  +    G    +     N TG +H+GH   + + DTL    
Sbjct: 11  PTVTEAKWQTAWEESHAFKADPDRPGEPYCVVIPPPNVTGSLHMGHAFESSLIDTLVR-- 68

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                                         Y +   +N   LP   +  + ++ + +   
Sbjct: 69  ------------------------------YHRMRGDNTLWLPGTDHASIAVQTILERQL 98

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   EK+L     +  ++   I+   L+ L +  D          G    ++
Sbjct: 99  KAEGKTRDDLGREKFLERAWQWKAESGSTIVNQ-LRRLGVSVDWTRERFTMDEGLSQAVK 157

Query: 275 DIIDNLARQGYVYEG 289
                L  +G +Y G
Sbjct: 158 TAFIKLYEEGLIYRG 172



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 127/376 (33%), Gaps = 50/376 (13%)

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             LA        NF  E+W  + +D+ V+     I   L     Q   +    + +    
Sbjct: 371 NALACLDEDNSPNFVPERWGKVYRDWLVKLKDWCISRQLW-WGHQIPAWYVISETNGAIT 429

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                I+     +          P  +  Q  D+      F S +           S   
Sbjct: 430 DHTPFIVAYDEAEALAKAKAEYGPTVQLQQDPDVLD--TWFSSGL--------WPFSTMG 479

Query: 331 YTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +     DLA  Y       GFD +I+         V R+  +A   + +    +V +  L
Sbjct: 480 WPEQTDDLAKYYPTSTLVTGFD-IIFFW-------VARMTMMAGHFTGQIPFKDVYIHGL 531

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V   RD    KMSK A + I    ++++ G+D++R+ ++        D      +++ + 
Sbjct: 532 V---RDENGKKMSKSANNGIDPLLLINKYGTDALRYTLIREVAGAGQDISLQYDRQKDES 588

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
             V     +      ++  A+ +  +LD     +  +    + + ++  +   L+   +V
Sbjct: 589 ESVEA---SRNFANKLWNAARFVMMNLDGQTPQQLGLAPGEDLELADRWI---LSRLNQV 642

Query: 509 IENATIAQEPYKLAFY--------LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559
           I+     +E  ++  Y        LY+ +   F   +    E  + R        +   R
Sbjct: 643 IQQ---TRE--QIEDYGLGEAAKGLYEFIWGDFCDWY---IELAKPRLWNKEGGDVGTQR 694

Query: 560 LQLVHAVASIINSGLN 575
            QLV     ++   L+
Sbjct: 695 -QLV--ARQVLAHTLD 707


>gi|118580003|ref|YP_901253.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502713|gb|ABK99195.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 886

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +       +  +        +I     N TG +H+GH     + D L       G
Sbjct: 15  EKKWYAEWEEKHYFHADATSDNKPYSIVIPPPNVTGALHMGHALNNTMQDILCRWKRMQG 74

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           + V                           L+   +D        V  + +  E  D++ 
Sbjct: 75  HNV---------------------------LWMPGTDHAGIATQNVVERQLAAEGMDRH- 106

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   + ++  V  +  ++  +II   LK L    D          G    +R +  
Sbjct: 107 ----DLGRDAFIQRVWKWKAESGGQIIGQ-LKRLGASCDWERERFTMDAGLSKAVRTVFV 161

Query: 279 NLARQGYVYEG 289
            L + G +Y  
Sbjct: 162 KLHQDGLIYRD 172


>gi|117924772|ref|YP_865389.1| valyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117608528|gb|ABK43983.1| valyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 929

 Score = 46.8 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 37/238 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + +           +  + +       I     N TG +H+GH     + D L   
Sbjct: 11  DPTGVEQRWYQTWEEQGCFKPSGLSAANAYCIMIPPPNVTGSLHMGHAFQDTIMDALIRY 70

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               G+    +   + AG   Q+      V  R  +A                       
Sbjct: 71  NRMQGHNTLWQCGTDHAGIATQM------VVERQLEA----------------------- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                      +   + ++  V ++   +   I +  L+ +    D          G   
Sbjct: 102 -----EGKSRHDLGRDAFIERVWEWKASSGNTITKQ-LRRMGASCDWSRERFTMDDGLSE 155

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            ++++   L  +  +Y G               D + +          +  P+++ DG
Sbjct: 156 AVKEVFVRLYEEDLIYRGKRLVNWDPVLHTAVSDLEVISEEEQGHMWHMRYPMVEGDG 213


>gi|312903154|ref|ZP_07762335.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|310633545|gb|EFQ16828.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315163378|gb|EFU07395.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578631|gb|EFU90822.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 478

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A + ++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|256369417|ref|YP_003106925.1| methionine--tRNA ligase [Brucella microti CCM 4915]
 gi|255999577|gb|ACU47976.1| methionine--tRNA ligase [Brucella microti CCM 4915]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|148887058|sp|Q4A8M4|SYE_MYCH7 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|144575294|gb|AAZ53515.2| glutamyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 467

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 94/306 (30%), Gaps = 46/306 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         ++       +QI  L  
Sbjct: 8   APSPTGFLHIGGARTALFNYLFAKHHNGDFILRIEDSDNSRNIKD----GEKSQIENLLW 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++               G Y +    E   K + EL+           K ++  
Sbjct: 64  LGIIPDEKPGSETK--------FGPYRQSEKLERYQKLAQELIK----------KGFAYY 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A       +L+          S    +  +   I D       +   +       K+K  
Sbjct: 106 AFDNQEELELQKKEQIAKGIFSFR--YDQNWLKISDQEKQKRLKNKHFVIRFKVDKAKNF 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q+ F  + + D     ++KSDG  TY   + A     ++    ++    G +
Sbjct: 164 CWNDLVRGQICFEGSAISDW---VIIKSDGFPTY---NFAVVVDDFDMEISHI--FRGEE 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A + K  +        + +  D    K+SKR  +           G 
Sbjct: 216 HISNTPKQIGIYQAFNWKTPKFGH-----LTIITDKNGKKLSKRDKNLFQFIEDYKNQGY 270

Query: 420 DSVRFM 425
            S  F 
Sbjct: 271 HSEAFF 276


>gi|226943309|ref|YP_002798382.1| isoleucyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511493|sp|C1DPH5|SYI_AZOVD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226718236|gb|ACO77407.1| isoleucyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 943

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 88/248 (35%), Gaps = 30/248 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------G 329
              G ++   +   + +  ++ +    +  FR   + ++G + D+    +D        G
Sbjct: 483 KESGELHPRTVELME-EVARRVEQKGIEAWFRLDPAELLGAEADQYDKIADTLDVWFDSG 541

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  +           +++G    +Y+ GSD   G+        AA+ +  A    LL   
Sbjct: 542 TTHWHVMR-GSHPMGHDQGPRADLYLEGSDQHRGWFHSSLLTGAAI-DGHAPYRGLLTHG 599

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             +  +G   KMSK  G+ I  + + D +G+D +R  +         D+       +   
Sbjct: 600 FTVDENGR--KMSKSLGNVIAPQEITDSMGADILRLWV------SATDYSGEMAVSKQ-- 649

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
                +Q +    R I   A+ +  +L      ++++  E         +   L    R 
Sbjct: 650 ----ILQRSADAYRRIRNTARFLLANLSGFDPAKDLLAAEDMLALDRWAVDRALL-LQRE 704

Query: 509 IENATIAQ 516
           +E A  + 
Sbjct: 705 VEEAFDSY 712


>gi|300870561|ref|YP_003785432.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688260|gb|ADK30931.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 649

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 136/422 (32%), Gaps = 62/422 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GHC C +  DT+A      GY+V      ++ G +I   A       ++ + +
Sbjct: 15  PSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIQRKAEEAKTTPKEYV-D 73

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N  D  +  +  +++ +        Y     ++ E +   I K    +    I +   K 
Sbjct: 74  NIVDATKKLWKRLHIDYS------HYIRTTDDYHERRVQNIFKQLYDKGY--IYKGSYKG 125

Query: 252 LN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           L  +  + F +E    + D        D      Y  E       S+         K+  
Sbjct: 126 LYCVSDEAFFTESQVVKKDDGKCY-CPDCEKELEYKEEECYYLKLSEFGDWLINYYKEH- 183

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM-------- 356
                  +  +R              DLA  +   + G       ++ IYV         
Sbjct: 184 ---PEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLKWGIPCPIDNEHSIYVWIDALSNYI 240

Query: 357 -----GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---------------GM 396
                  +   Y K        V ++  + + ++  ++    D                 
Sbjct: 241 TALGYSEEDELYKKYWPCDVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVFGHGWVLFDD 300

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ +    ++D+ G D++R+ ++   N  +  F + +     + N      Y
Sbjct: 301 GKKMSKSRGNVVDPNALIDKYGVDALRYFLMREINFGVDGF-YSQEIFLKRINSDLANDY 359

Query: 457 AYA--RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
                R  ++  +  D        + P  V   ES +   E +L   +      +E+A  
Sbjct: 360 GNLWHRITTMLGKYFD-------GILPEEV---ESVYSDRERELKKAVLTLDANVESALD 409

Query: 515 AQ 516
           + 
Sbjct: 410 SF 411


>gi|322421576|ref|YP_004200799.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127963|gb|ADW15523.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 925

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 17/159 (10%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       +     +    NVL    V    DG   KMSK  G+ +    
Sbjct: 559 YLEGSDQHRGWFHSSLLASVGTRGRAPYKNVLTHGFVM---DGAGRKMSKSVGNVVAPED 615

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G+D +R  +  +   + L      +   S+         +Y R R+  R      
Sbjct: 616 VIKKFGADVLRLWVAAQDYRDDLRISQEILTRLSE---------SYRRIRNTCRYILGNI 666

Query: 473 PDL--DFDLFPRNVIPQESEFDTSELQLIVH--LAEYPR 507
            D   D D      +P+   +   +L+L+    LA Y  
Sbjct: 667 HDFNPDTDCVAYADMPELDRWAMHQLELLKEKVLASYND 705


>gi|158290810|ref|XP_312366.4| AGAP002570-PA [Anopheles gambiae str. PEST]
 gi|157018076|gb|EAA08061.4| AGAP002570-PA [Anopheles gambiae str. PEST]
          Length = 490

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 30/280 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G  R A+     A      G +        D    +   A  ++   + A
Sbjct: 8   APSPTGYMHLGGLRTALYNYLYA---KAHGGKFVLRIEDTDRERFVEGAADKMYADLKWA 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D D  +G   G Y +    E+  +   +L+      +     +  ++ + K     
Sbjct: 65  GVEPDEDPYKGGPYGPYTQSQRYEIYKQEVKKLME-DGRAYYCFCTERRLELLRK----- 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +AL ++  +   ++      P  I    + LA+       I     SK  +  D+   +
Sbjct: 119 -EALRLR-QVPKYDNKCRHLTPGQIA---ERLAKNDKFC--IRFKLASKGDEFNDLIYGK 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKRL 367
           +++       + D  ++KSDG  TY  A++       +  +  + +V+ G +      + 
Sbjct: 172 IVYFIAQ--QEGDPVIIKSDGFPTYHFANV------VDDHYMRITHVLRGVEWQISTPKH 223

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A   +  Q        + L  +    K+SKR GD 
Sbjct: 224 IQLFHAFGWRPPQ-----YAHLPLIMNPNGSKLSKRQGDV 258


>gi|72080480|ref|YP_287538.1| glutamyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 468

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 94/306 (30%), Gaps = 46/306 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         ++       +QI  L  
Sbjct: 9   APSPTGFLHIGGARTALFNYLFAKHHNGDFILRIEDSDNSRNIKD----GEKSQIENLLW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++               G Y +    E   K + EL+           K ++  
Sbjct: 65  LGIIPDEKPGSETK--------FGPYRQSEKLERYQKLAQELIK----------KGFAYY 106

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A       +L+          S    +  +   I D       +   +       K+K  
Sbjct: 107 AFDNQEELELQKKEQIAKGIFSFR--YDQNWLKISDQEKQKRLKNKHFVIRFKVDKAKNF 164

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q+ F  + + D     ++KSDG  TY   + A     ++    ++    G +
Sbjct: 165 CWNDLVRGQICFEGSAISDW---VIIKSDGFPTY---NFAVVVDDFDMEISHI--FRGEE 216

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A + K  +        + +  D    K+SKR  +           G 
Sbjct: 217 HISNTPKQIGIYQAFNWKTPKFGH-----LTIITDKNGKKLSKRDKNLFQFIEDYKNQGY 271

Query: 420 DSVRFM 425
            S  F 
Sbjct: 272 HSEAFF 277


>gi|312867490|ref|ZP_07727698.1| glutamate--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096896|gb|EFQ55132.1| glutamate--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 485

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL  KY  +LL     K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQKYIDQLLAKG--KAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGVIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|308190251|ref|YP_003923182.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma
           fermentans JER]
 gi|307624993|gb|ADN69298.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma
           fermentans JER]
          Length = 514

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 114/351 (32%), Gaps = 52/351 (14%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +GP+H+GH  C ++   + +     GY+       ++ G +I   AL             
Sbjct: 17  SGPLHIGHLYCTIMAWVIRNYKKALGYDAKLLTGSDEHGQKIQEKALVA--------KKE 68

Query: 193 DSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDY---------SVQAMM 242
                +             E+  D +S    +F E+    I   +         S Q + 
Sbjct: 69  PKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIYKGSYQGLY 128

Query: 243 KIIRDDLKALNI-------------QHDIFISEDDFHRGDPSPIRDIIDNLARQG----- 284
            +  ++   +N              +H++   E++ +      ++       ++      
Sbjct: 129 SVQDEEFLTINQAVYKDGKYYHPSSKHELINMEEESYFFKMKEVQKWWSEYNKKHPDFLL 188

Query: 285 --YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
              V   +      +  +   + R  + +    + D      +  D  + Y    L +  
Sbjct: 189 PKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALFNYITK-LGFDF 247

Query: 343 CKYERGF-------DNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            K +  F       D +++++G + +  +      V   +  K     V       L RD
Sbjct: 248 NKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVSHG----LLRD 303

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
              +KMSK   + I   ++ D+   + +++    +    E  +F   K+KE
Sbjct: 304 KDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKE 354


>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 459

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 106/313 (33%), Gaps = 55/313 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS-------VFWRYQQAL 189
           H+GH R  V  D +A  +   GY++T    I D   +I   AL        +  R  Q +
Sbjct: 37  HIGHGRTFVCFDVIARYLRSLGYDLTYVRNITDVDDKIIKRALENKETCDQLVERMVQEM 96

Query: 190 YNNDSDL----PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           Y +   L    P+      +      E+ +K       +  +    +    S +   K+ 
Sbjct: 97  YKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLS 156

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R DL+ L     I     + +    +P+  ++  ++++    E     P         ++
Sbjct: 157 RQDLEQLQAGARI-----EINEIKKNPMDFVLWKMSKEN---EPSWASPWGAGRPGWHIE 208

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +      +G+  D     SD  + +   ++A                         +
Sbjct: 209 CSAM--NCKQLGEHFDIHGGGSDLMFPHHENEIA-------------------------Q 241

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
              A           +N  +   + +       KMSK  G+F T+R V++   +++VR+ 
Sbjct: 242 SCCAHGGQ------YVNYWIHSGMIMVD---KEKMSKSLGNFFTIRDVLNHYNAEAVRYF 292

Query: 426 MLWRKNSELLDFD 438
           +L       L++ 
Sbjct: 293 LLTAHYRSQLNYS 305


>gi|195495398|ref|XP_002095250.1| GE22294 [Drosophila yakuba]
 gi|194181351|gb|EDW94962.1| GE22294 [Drosophila yakuba]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 85/230 (36%), Gaps = 30/230 (13%)

Query: 348 GFDNM--IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G D +  +Y+ G D  +G+ +    ++ A  E      + +        D    KMSK  
Sbjct: 575 GKDKIADLYLEGYDQFTGWFQSSLLMSIAARECSPYKALFVHGF---TVDEKGYKMSKSL 631

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I+ + +  + G+D++R+ +       +      K+ +Q+ EN         ++ R  
Sbjct: 632 GNVISPKQITKKYGTDALRWWVASHGTQHMSITVSDKLLQQAAEN--------LSKVRGT 683

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R  K +      D      +   S+       L+  L E+   +E    A E  ++  Y
Sbjct: 684 LRYLKGVIG----DKQSAEKLIPTSDKSFLNRFLLSQLVEFESEVEKLYNAYEYNRVVAY 739

Query: 525 LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + +A+     + H     + R    +++++         A+   +   
Sbjct: 740 VQNFIANQVSAVYVH---LIKDRLYCGDDQEI--------LAIRQTLTHC 778


>gi|164686738|ref|ZP_02210766.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
 gi|164604128|gb|EDQ97593.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
          Length = 889

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 56/198 (28%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    + L    +    +  +         I     N TG +H+GH     + D L 
Sbjct: 9   TYNPKDFEQRLYQEWMDKGYFKSSPNPDKKPFCIVLPPPNITGQLHMGHALDHTLQDVLI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D          ++ +  
Sbjct: 69  RWKRMDGY---------------------------EALWQPGTDHASIATEVKVVEKIR- 100

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +          E++L    D+      ++I D +K L    D         +G   
Sbjct: 101 ---KEEGKSKYELGREEFLKRAMDWK-DEYGRVIVDQMKQLGSSCDWDRERFTMDQGCNE 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L  +G++Y G
Sbjct: 157 AVTEFFVKLYEKGHIYRG 174



 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +     A A      +     +L     L RD    KMSK  G+ I    V+
Sbjct: 486 VTGYDIIFFWVVRMAFAGMFCMNETPFEHVLIHG--LVRDSQGRKMSKSLGNGINPLEVI 543

Query: 415 DEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           DE G+D++RFM++   +    + F F +V+    
Sbjct: 544 DEYGADALRFMLITGNSPGNDMRFYFERVEASRN 577


>gi|86150271|ref|ZP_01068498.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597490|ref|ZP_01100724.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562466|ref|YP_002344245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|25009405|sp|Q9PP85|SYM_CAMJE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|85839387|gb|EAQ56649.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190082|gb|EAQ94057.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360172|emb|CAL34966.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926083|gb|ADC28435.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 628

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 94/320 (29%), Gaps = 38/320 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + +D            + E+ +          I+     +       + P   K    
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEK-----DPILPKNKKNELI 188

Query: 302 CDMDRKQLLFRSTMVGDDVDRPL---LKSDGSYTYFAADLAYFKCK---YERGFDNM--- 352
             +         T    D    L   +  D    Y   D  +       ++   +N    
Sbjct: 189 NFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDFQNKGENAKFW 248

Query: 353 ---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
              ++++G D    + R  A+          + +        +      KMSK  G+ + 
Sbjct: 249 PAHVHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVK 304

Query: 410 LRHVVDEVGSDSVRFMMLWR 429
            + VVD  GS++ R+ +L  
Sbjct: 305 PKEVVDAYGSEAFRYFLLRE 324


>gi|323465976|gb|ADX69663.1| Leucyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 804

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++ +L      Y   ++  T   
Sbjct: 648 KNDGELDKV---YAETVKKVTEDF 668


>gi|315224038|ref|ZP_07865879.1| glutamate--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946009|gb|EFS98017.1| glutamate--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 500

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 99/287 (34%), Gaps = 40/287 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  +  Y+  A   I     
Sbjct: 7   APSPTGALHIGGVRTALFNYLFAKKHGGDFLLRI-----EDTDQNRYVEGAEQYIINSLN 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +   Y + +       P       Y +   K L  +Y+  L+N     W     D +  
Sbjct: 62  WLGLTYDEGVGKEGKHAP-------YRQSERKPLYKQYADTLINNG---WAYYAFDTA-- 109

Query: 240 AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +   R + +A        + + D           ++   L  +G  Y      P ++ 
Sbjct: 110 EALDTSRKEAEAKGETFIYNWATRDALQNSLSLSKEEVQQRL-ERGDEYVIRFKMPHNEQ 168

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM R ++   ++ +    D+ L KSDG  TY    LA     +     ++I   G 
Sbjct: 169 LKMNDMIRGEVTIDTSTLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--GE 220

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    +     +  A   +       L  +++   +G   K+SKR G
Sbjct: 221 EWLPSMALHLLLYRAFGWQAPAFAH-LPLILKPVGNG---KLSKRDG 263


>gi|295677443|ref|YP_003605967.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437286|gb|ADG16456.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 945

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 87/253 (34%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPK--SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +  ++  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEQVAQRVEKEGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D DF    R V     E D   + L  +L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHARPV-KDWLEIDRYAVALSANLQ--NDIL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|237734819|ref|ZP_04565300.1| valyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382147|gb|EEO32238.1| valyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 874

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 33/181 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             +Y           +I     N TG +H+GH     + D +       GY+        
Sbjct: 25  DKKYFEAGDTSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDAL------ 78

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                ++   ++   + +  +        +    G           ++Y+S         
Sbjct: 79  -WLPGMDHAGIATQAKVEARMREEGISRYDLGRDG--FLEKAWSWKEEYAS--------- 126

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                          IIR   + L +  D          G    ++++   L  +G +Y+
Sbjct: 127 ---------------IIRAQWEKLGLSLDYSKERFTLDDGLSEAVKEVFVKLYNEGLIYQ 171

Query: 289 G 289
           G
Sbjct: 172 G 172



 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 59/161 (36%), Gaps = 35/161 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G VY G  PP   +   K D D     F S      T+   + D  L K      YF
Sbjct: 421 KETGEVYVGKNPPADLEN-WKQDEDVLDTWFSSALWPFSTLGWPNTDSELFKR-----YF 474

Query: 335 AADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                        G+D +I+   S     S +            E++   +VL+  L+  
Sbjct: 475 PT------NTLVTGYD-IIFFWVSRMIFQSLHFT----------EERPFEHVLIHGLI-- 515

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            RD    KMSK  G+ +    V+DE G+D++RF +      
Sbjct: 516 -RDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAP 555


>gi|254520460|ref|ZP_05132516.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914209|gb|EEH99410.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 647

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 118/343 (34%), Gaps = 74/343 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D LA     +GY+V      ++ G +I  +A             
Sbjct: 15  PSTKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQRIAEE----------- 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  ++  +   + D +  +++N   +K++    DY ++A+  I +     
Sbjct: 64  ------KGITPKEHVDEIVSGIKDLW--KMMNISYDKFIRTTDDYHIKAVQDIFKKLYDK 115

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G+       ++    + Y ++      K     
Sbjct: 116 GDIYKSSYEGLYCTPCESFWTETQLVNGNCPDCGRPVEKSKEEAYFFKMSNYADKLMEYI 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   D  Q   R   + ++  +P             DL   +  +  G    FD  +++Y
Sbjct: 176 ETHPDFIQPESRKNEMVNNFLKP----------GLQDLCVSRTSFNWGVPVTFDENHVVY 225

Query: 355 VM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----- 395
           V              GSD+   Y K   A    + +   + + +   ++ +  D      
Sbjct: 226 VWIDALSNYITALGYGSDNKDLYDKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQ 285

Query: 396 ---------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                       KMSK  G+ +    +V+  G D+VR+ +L  
Sbjct: 286 VFGHGWLLVDGGKMSKSKGNVVDPVTLVENFGVDAVRYYLLRE 328


>gi|210634029|ref|ZP_03297947.1| hypothetical protein COLSTE_01865 [Collinsella stercoris DSM 13279]
 gi|210158973|gb|EEA89944.1| hypothetical protein COLSTE_01865 [Collinsella stercoris DSM 13279]
          Length = 862

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K + S     +        K  K  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 28  KWMKSWEEQNLFAVDTDSTKPKKYVLEMF-PYPSGDLHMGHARNYTIGDAMARQARMRGF 86

Query: 160 EV 161
           +V
Sbjct: 87  DV 88


>gi|187925133|ref|YP_001896775.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|254782379|sp|B2T6I7|SYI_BURPP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187716327|gb|ACD17551.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 945

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 78/229 (34%), Gaps = 27/229 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   +  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAQRVEKAGIEAWQTLDPRELLGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                   Y R R+  R       D DF    R V     E D   + L
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHARPV-EDWLEIDRYAVAL 711


>gi|222053500|ref|YP_002535862.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221562789|gb|ACM18761.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 924

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 83/275 (30%), Gaps = 51/275 (18%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           D    + S   DI      +  +  G   P   KT    +MD   + F S +        
Sbjct: 491 DLFEKESS---DIWYEREAKELLPTGTTCPACGKTEFDKEMDILDVWFDSGVSH------ 541

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQIN 382
                       A +   +       D  +Y+ GSD   G+       +           
Sbjct: 542 ------------AAVLEHRDNLSSPAD--MYLEGSDQHRGWFHSSLLASVGTRGVAPYKA 587

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL    V    DG   KMSK  G+ +    V+ + G++ +R  +  +   + L      +
Sbjct: 588 VLTHGFVV---DGSGRKMSKSVGNVVAPEDVIKKYGAEVLRLWVAAQDYRDDLRISQEIL 644

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF--DLFPRNVIPQESEFDTSELQLIV 500
              S+         AY R R+  R       D D   D      +P+   +   +L+L+ 
Sbjct: 645 TRLSE---------AYRRIRNTCRYILGNIADFDPKRDSVDYGDMPEIDRWALHQLELLK 695

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
                   +  A    E + L  Y        +  
Sbjct: 696 ------EKVLKAYENCEFHVL--Y-----HAVNSF 717


>gi|91974916|ref|YP_567575.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123722195|sp|Q13E15|SYL_RHOPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91681372|gb|ABE37674.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 878

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    + I   RN   +     +E     P+G +H+GH R   +GD +A  M   G+
Sbjct: 14  KWQAKWDEAKIFATRNDDPRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGH 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|71013343|ref|XP_758579.1| hypothetical protein UM02432.1 [Ustilago maydis 521]
 gi|46098237|gb|EAK83470.1| hypothetical protein UM02432.1 [Ustilago maydis 521]
          Length = 592

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 67/402 (16%), Positives = 130/402 (32%), Gaps = 64/402 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D    +     ++      A
Sbjct: 68  APSPTGYLHLGGLRTALFNHLYAR---ALGGKWILRIEDTDQTRLVPGSISALQETLCWA 124

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y++    +L   Y+ +L++          +D+  +    ++ DD
Sbjct: 125 KLDYDEGPSCGGAYGPYIQSERLDLYRSYAEKLIDQG-----KAYRDFRAE----VVADD 175

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                + +      D +   D +  R +I      G  Y   L  P +K     D+    
Sbjct: 176 ASKRGVNNVPL--RDSYIAPDETEARHLI----SLGKPYVVRLRAP-TKALDHQDLVYGH 228

Query: 309 LLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + F S  +     D  LLKS+G  TY    LA     +E    +++   G +    + + 
Sbjct: 229 IHFPSDPLRHGTEDAILLKSNGWPTYH---LASVVDDHEMAITHVLR--GEEWLPSLPKH 283

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------ITLRHVVDEVG 418
             +  A+     +        + L  +    K+SKR GD          +    + + +G
Sbjct: 284 LWLYKALDFTPPKFAH-----LPLLVNADGTKLSKRTGDVRVESYRDKGVEPEALCNMLG 338

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKEN------------PVFYVQYAYARCRSIFR 466
                 +   +++SE  +  +  +  Q   N             V   +  Y   R +  
Sbjct: 339 LTGYNNLAYHQRHSEHDESAYDVLTMQDMINGFDICHVNRSRATVDLAKLYYLNARHVAL 398

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           + +D       D     + P               +A +P V
Sbjct: 399 KLQDARKGGGRDELVARLKP-------------RLIAAFPEV 427


>gi|329894351|ref|ZP_08270221.1| Valyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923147|gb|EGG30470.1| Valyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 920

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 66/220 (30%), Gaps = 39/220 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         S   +  +  G+GT  +I     N TG +H+GH     + D L 
Sbjct: 4   TFQPDAIEHKWYQEWESQGYFAPS--GEGTPYSIMIPPPNVTGSLHMGHGFQDTIMDALI 61

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G +   +   + AG   Q+      V  R  +A              G+    +
Sbjct: 62  RYHRMQGCDTLWQPGTDHAGIATQM------VVERQLEA-------------QGIKRHDI 102

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           G+               + ++  V ++  Q+    I   L+ L    D          G 
Sbjct: 103 GR---------------DAFVDKVWEWKAQSG-GTITSQLRRLGASLDWSRERFTMDPGL 146

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              ++ +  +L  +G +Y G               D + L
Sbjct: 147 SDAVQKVFIDLYNEGLIYRGQRLVNWDPKLHTAVSDLEVL 186


>gi|284800532|ref|YP_003412397.1| hypothetical protein LM5578_0279 [Listeria monocytogenes 08-5578]
 gi|284056094|gb|ADB67035.1| hypothetical protein LM5578_0279 [Listeria monocytogenes 08-5578]
          Length = 484

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 105/308 (34%), Gaps = 43/308 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLP 231
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    ELL+     K   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQELLDKDLAYKCYC 112

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             ++  V+   +    ++   + +      E                    QG+      
Sbjct: 113 TEEELDVEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRF 159

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     +
Sbjct: 160 KVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISH 213

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   +  A   +      +      L  +    K+SKR G  I   
Sbjct: 214 VLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFI 266

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 267 EQYRDLGY 274


>gi|304316504|ref|YP_003851649.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778006|gb|ADL68565.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 878

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I +  +  G    +    K     +     N TG +H+GH     + D +    
Sbjct: 10  KEFEDRIYNEWMEKGYFTPKIDYSKKPFTIV-IPPPNITGQLHMGHALDNTMQDIIIRWK 68

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY           G+   ++A  V    +      ++ L +             +  
Sbjct: 69  RMQGYVALWIP-----GSDHASIATEVKVLDK---IKEETGLTKRDIGREKFLEKAWQWK 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY + +L+                         LK L    D               +R
Sbjct: 121 EKYENRILDQ------------------------LKKLGSSCDWTRKRFTMDEALSKAVR 156

Query: 275 DIIDNLARQGYVYEG 289
           ++   L ++G +Y G
Sbjct: 157 EVFVALYKKGLIYRG 171



 Score = 37.2 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 84/254 (33%), Gaps = 52/254 (20%)

Query: 335 AADLAYF--KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +     +         V  K+  I+        L 
Sbjct: 469 TEDLKYFFPTDVLVTGYD-IIFFWVAR---MIFMSLEFMKEVPFKRVLIH-------GLV 517

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    ++++ G+D++RF ++        D  F   K ++  N   
Sbjct: 518 RDSQGRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGN-DMRFSDDKLEASRN--- 573

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                         +  +    +  +L   +        + ++  ++  L     V++  
Sbjct: 574 -----------FANKLWNASRYVMLNLTSDDTTLYLENLNIADKWILTRL---NNVVKEV 619

Query: 513 TIAQEPYKLAFY--------LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           T   E      Y        LYD L S F   +      P L       +K T   L   
Sbjct: 620 TENLE-----KYELGIAAGKLYDFLWSEFCDWY-IELSKPVLYGDDLEAKKKTKSVL--- 670

Query: 564 HAVASIINSGLNII 577
                ++++ L ++
Sbjct: 671 ---RYVLDNTLRLL 681


>gi|254466755|ref|ZP_05080166.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687663|gb|EDZ48145.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 854

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y++P    +   +   +GI   +   GK     +E     P+G +H+GH R   +GD +A
Sbjct: 4   YIAPEIEARWQKAWAEAGIFQAKRTGGKPKYYVLEMF-PYPSGKLHMGHVRNYTMGDVIA 62

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 63  RYKLSTGHNV 72


>gi|154354310|gb|ABS76242.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5193]
          Length = 130

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSV 81
           K+E     +I + + R+       T  A+ LS+   +  + IAE I + + ++   V S+
Sbjct: 30  KIETLANKKIPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSVNSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLELAHPVLASWLQRLVE 115


>gi|88859089|ref|ZP_01133730.1| valine tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819315|gb|EAR29129.1| valine tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 63/216 (29%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +     GKG   +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQSLYQDWEEKGYF--KPSGKGQAYSIMIPPPNVTGSLHMGHAFQDTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 62  RFKRMQGNNTLWQVGTDHAGIATQMV-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA + +    +   + ++  +  +  ++   I +  L+ L    D          G   
Sbjct: 91  KLAAEENKTRHDLGRDAFIDKIWQWKNESGGTITKQ-LRRLGASVDWDRERFTMDEGLSE 149

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G               D +
Sbjct: 150 AVKEVFVRLHKEDLIYRGKRLVNWDPKLHTAISDLE 185


>gi|116749515|ref|YP_846202.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|166231649|sp|A0LK15|SYL_SYNFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116698579|gb|ABK17767.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 829

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + K           +  + I    K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 6   APKRIEKKWQEHWEREKLFEVSEIPGREKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARF 65

Query: 154 MAFSGYEV 161
           +   GY V
Sbjct: 66  LRMRGYNV 73


>gi|328882446|emb|CCA55685.1| Valyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 875

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 75/268 (27%), Gaps = 40/268 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L 
Sbjct: 18  TYAPAEVEGPLYQRWVERGYFEADAKSEKPPYTIVIPPPNVTGALHLGHAFQVTLMDALT 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+E             ++   ++   + +Q L                      
Sbjct: 78  RRKRMQGFETL-------WLPGMDHAGIATQNKVEQQL---------------------- 108

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +      +   + ++  V  +  +   +I+   L+ L    D          G   
Sbjct: 109 ---AEEGKSRHDLGRDAFVERVWQWKDEYGGRILGQ-LRRLGAGLDWSRERFTMDEGLSK 164

Query: 272 PIRDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            ++ I  +L     +Y              + +  + +         S   G+  D  ++
Sbjct: 165 AVQKIFKDLYEDDLIYRAERIINWCPRCLTAISDIEVEYQDDAGELVSIRYGEGEDSLVV 224

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  + T    D A      +  + +++
Sbjct: 225 ATTRAET-MLGDTAVAVHPEDERYKHLV 251


>gi|319408777|emb|CBI82434.1| Valyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 907

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 57/198 (28%), Gaps = 47/198 (23%)

Query: 100 KILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +I       G+         G     +     N TG +H+GH     + D +       G
Sbjct: 14  QIAKEWEAHGVFKAGAGSKPGSEPFCVMLPPPNVTGSLHMGHALNTTIQDIMVRFQRMRG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V  +  ++ AG     +                               V ++LA+   
Sbjct: 74  KNVLWQPGLDHAGIATQMV-------------------------------VERQLAEH-- 100

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDD-------LKALNIQHDIFISEDDFHRGDPS 271
                  E     + ++  V+ + K  R+        L+ L +  D          G   
Sbjct: 101 ------QEPTRQEMGREKFVERVWKWRRETGGIIVNQLRRLGVSCDWSRERFTMDEGLSQ 154

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L +QG +Y+ 
Sbjct: 155 AVCEVFVTLYKQGLIYKD 172


>gi|254518604|ref|ZP_05130660.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912353|gb|EEH97554.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 880

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 56/198 (28%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    + +  +      +   +       +I     N TG +H+GH     + D L 
Sbjct: 10  TYNPKEFEERIYKLWEEKKYFTPIIDKNKKPFSIVMPPPNITGKLHLGHALDNTLQDMLI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L      L EG            
Sbjct: 70  RFKRMQGYCTL-------WLPGQDHASIATEVKVENEL------LKEGLIK--------- 107

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V +++       IR  LK + +  D              
Sbjct: 108 ----------KEMGREAFLEKVWEWA-DEYRDTIRTQLKKMGVSCDFSREAFTMDENLNK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R +   L  +G +Y+G
Sbjct: 157 AVRTVFVKLYNEGLIYQG 174



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 41/211 (19%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K   + +L   +   RD    KMSK  G+ +    V+DE G+D++RFM++         
Sbjct: 507 DKTPFDTVLIHGI--IRDSQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGN------ 558

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                    S  N + Y+       R+   +  +    +  +L    +   +   D  E 
Sbjct: 559 ---------SPGNDIRYIPERVEAARNFANKMWNASRFVMMNLDKEVM---DKYADCKEY 606

Query: 497 QLIVH--LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS-------HGRENPRLRF 547
            L     L+    +++  T   E      Y  +L       +                  
Sbjct: 607 SLADKWILSRMNTLVKEVTENME-----KY--ELGIALQKVYDFMWTEFCDWYIELVKGV 659

Query: 548 VQANNRKLTMMRLQLVHAVAS-IINSGLNII 577
           +  ++ K       +V+ V + ++ +GL ++
Sbjct: 660 LYGDDEKQKG----IVYNVLNDVLKTGLKLL 686


>gi|167755851|ref|ZP_02427978.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
 gi|167704790|gb|EDS19369.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
          Length = 873

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 33/181 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             +Y           +I     N TG +H+GH     + D +       GY+        
Sbjct: 24  DKKYFEAGDTSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDAL------ 77

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                ++   ++   + +  +        +    G           ++Y+S         
Sbjct: 78  -WLPGMDHAGIATQAKVEARMREEGISRYDLGRDG--FLEKAWSWKEEYAS--------- 125

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                          IIR   + L +  D          G    ++++   L  +G +Y+
Sbjct: 126 ---------------IIRAQWEKLGLSLDYSKERFTLDDGLSEAVKEVFVKLYNEGLIYQ 170

Query: 289 G 289
           G
Sbjct: 171 G 171



 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 59/161 (36%), Gaps = 35/161 (21%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYF 334
              G VY G  PP   +   K D D     F S      T+   + D  L K      YF
Sbjct: 420 KETGEVYVGKNPPADLEN-WKQDEDVLDTWFSSALWPFSTLGWPNTDSELFKR-----YF 473

Query: 335 AADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                        G+D +I+   S     S +            E++   +VL+  L+  
Sbjct: 474 PT------NTLVTGYD-IIFFWVSRMIFQSLHFT----------EERPFEHVLIHGLI-- 514

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
            RD    KMSK  G+ +    V+DE G+D++RF +      
Sbjct: 515 -RDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAP 554


>gi|282162890|ref|YP_003355275.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155204|dbj|BAI60292.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 1105

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 85/246 (34%), Gaps = 42/246 (17%)

Query: 355 VMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V G D   G+    +  A  V   KA  N +      L  D    KMSK  G+ +    V
Sbjct: 602 VEGHDQTRGWFY-SQLGAGMVGFGKAPYNSVCMHGFTL--DDQGRKMSKSLGNVVAPEEV 658

Query: 414 VDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++ G+D++R  +L +    E L F + +     +   +F+  Y +     +  +     
Sbjct: 659 LEKFGADALRLYVLSQSAPWEDLSFSWDECGNVYRTLNIFWNVYRFPLPYMVLDK----- 713

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI---AQEPYK----LAFYL 525
              D        + +    +   +     L+    VI+         E ++    L  ++
Sbjct: 714 --FDPTKTTYGSVKEHLRVEDRWI-----LSRLQAVIKEVNEGMATYELHRSTRALINFI 766

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP--- 582
            +        +   + +    +V+AN+         L H    ++++ + ++   +P   
Sbjct: 767 LE---DLSRWY--VQLSRERTWVEANDPDKLAAYWVLYH----VLSNTVKLM---APYTP 814

Query: 583 ---NEM 585
                M
Sbjct: 815 YMAERM 820


>gi|254693711|ref|ZP_05155539.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213983|ref|ZP_05928264.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915590|gb|EEX82451.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|253732537|ref|ZP_04866702.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253729466|gb|EES98195.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|329731981|gb|EGG68337.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 466

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +K+
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKE 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|149195308|ref|ZP_01872396.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134572|gb|EDM23060.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 98/322 (30%), Gaps = 40/322 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ DT+A      G +       ++ G +I   A       ++      +  
Sbjct: 22  HIGHAYTTIIADTIARYSRLKGIDTFFLTGTDEHGQKIEEAARKKGKSPKEYADEISAKF 81

Query: 197 PE--GYYPGVYLKHV-GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            E    +   Y K +   + A K   +       K   I KDY            +    
Sbjct: 82  KELWDEFEISYDKFIRTTDEAHKRGVQKAFLEMYKKGDIYKDYYEGHYCVSCESFIAPSQ 141

Query: 254 IQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + +D            I E+ +          I+D L  +  +          +  ++  
Sbjct: 142 LVNDELCPDCGKPTRIIKEESYFFRLSKYQDKILDWLKNKKPILPEAKANEVIRFVEEGL 201

Query: 304 MDRKQL-------LFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-----FKCKYERGFDN 351
            D           +     + D      +  D  + Y  A L Y        K       
Sbjct: 202 KDLSITRTSFEWGVKLPDEINDKKHVVYVWLDALFNYLTA-LGYGSEDESLVKKYWPAK- 259

Query: 352 MIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            ++++G D    H+ Y     A   ++  +  +            RDG   KMSK  G+ 
Sbjct: 260 -LHIVGKDILKFHAVY---WPAFLMSIGYELPKKIAAHGWW---TRDGE--KMSKSKGNV 310

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           I  + V D  G ++ R+ +L  
Sbjct: 311 IDPKEVADAYGIENFRYFLLRE 332


>gi|118580151|ref|YP_901401.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231626|sp|A1APS3|SYL_PELPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118502861|gb|ABK99343.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 823

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +       +G  +  N      K  +  +   P+G +H+GH R   +GD +   
Sbjct: 6   NPAAVEQKWQQQWETGASFAVNEQSDRPKYYLLEMFPYPSGRIHMGHVRNYSIGDVIGRF 65

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 66  KRMRGFNV 73


>gi|332557427|ref|ZP_08411749.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275139|gb|EGJ20454.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 471

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 96/292 (32%), Gaps = 45/292 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+                    ++   G +  T  L +
Sbjct: 7   KPVVTRFAPSPTGYLHIGGGRTALF------------------NWLYARGRK-GTFLLRI 47

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++      +D        + L   G+ ++     +       + L     Y   + 
Sbjct: 48  EDTDRERSTPEATDAILRGLTWLGLDWDGEVVSQFARKDRHAEVAREMLERGAAYKCFST 107

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSKTT 299
            + I    +A   +    +    +   DP+   D   +  +             P+S  T
Sbjct: 108 QEEIEAFREAARAEGRSTLFRSPWRDADPASHPDAPFVIRMKA-----------PRSGET 156

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  +  + F++  +    D  +L+SDG+ TY    LA     ++ G  ++I   G D
Sbjct: 157 VIEDEVQGTVRFQNETLD---DMVVLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDD 208

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           H     R   V  A+  +     V +   + L       K+SKR G      
Sbjct: 209 HLNNAARQTMVYEAMGWE-----VPVWAHIPLIHGPDGKKLSKRHGALGVEE 255


>gi|307268962|ref|ZP_07550326.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307287137|ref|ZP_07567208.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306501735|gb|EFM71026.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306514770|gb|EFM83321.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315033512|gb|EFT45444.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036335|gb|EFT48267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315165683|gb|EFU09700.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|329576209|gb|EGG57727.1| cysteine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 478

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 123/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVADRFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  + A ++++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|306840483|ref|ZP_07473242.1| methionyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289498|gb|EFM60716.1| methionyl-tRNA synthetase [Brucella sp. BO2]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|301114999|ref|XP_002999269.1| glutamyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262111363|gb|EEY69415.1| glutamyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 535

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 96/290 (33%), Gaps = 43/290 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN----TLALSVFWR 184
           + +PTG +H+G  R A+     A     SG +        D   Q+      L  S+ W 
Sbjct: 42  APSPTGYLHLGGLRTALFNYLFA---KSSGGQFILRIEDTDKTRQVEGSVEALVNSLKWC 98

Query: 185 YQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             +     ++  P G Y     + +     E   +       F   K L  +++   +  
Sbjct: 99  GVEEDEGPNAGGPHGPYIQSQRLSIYKEAAEKLIENGHAYRCFCTSKRLQKLRESQTRHG 158

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              + D      +  D    E    RG+   IR                L  P  KT  K
Sbjct: 159 EATMYD---RACLGLDEKEVEARVARGESHTIR----------------LKIPDGKTVVK 199

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R  + F     G D D+ L+KSDG  TY    LA     +     ++I   G +  
Sbjct: 200 -DLLRGYVQFE--HAGID-DQVLMKSDGYPTYH---LANVVDDHAMRISHVIR--GEEWL 250

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               +   +  A+  +       L  L+   R     K+SKR GD     
Sbjct: 251 PSTPKHVILYKALGYEAPTWAH-LGLLLNEDRS----KLSKRQGDVAVED 295


>gi|163843264|ref|YP_001627668.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673987|gb|ABY38098.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|163791192|ref|ZP_02185609.1| glutamyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873523|gb|EDP67610.1| glutamyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 489

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 99/302 (32%), Gaps = 33/302 (10%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + + + +PTG +H+G+ R A+     A     +G +        D    I     +
Sbjct: 3   KKVRVRY-APSPTGHLHIGNARTALFNYLFAR---HNGGDFIIRIEDTDLKRNIEG-GET 57

Query: 181 VFWRYQQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 + L  N  + P+     G Y +   +E+ D    +LL      +     +  ++
Sbjct: 58  SQLENLKWLGMNWDESPDNPGKFGPYRQSERREIYDPLVEQLL-LSNRAYKCYCSEDELE 116

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKT 298
              +  R               E   + G  + +           G          K  T
Sbjct: 117 EEREAQRAR------------GEMPHYGGKCAHLTAKEQKEKEASGIEPVIRFRVVKEST 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
            +  D+ +  + F +  +G D    ++K DG  TY       F    +  F  + +V+ G
Sbjct: 165 YRFEDIVKGSISFEAESIGGDF--VIIKRDGMPTYN------FAVAVDDHFMEITHVLRG 216

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A   +  Q       +  +       K+SKR G+ +       E+
Sbjct: 217 DDHIANTPKQLMIYEAFGWEAPQFGH----MTLIINSETGKKLSKRDGNILQFIEQYREL 272

Query: 418 GS 419
           G 
Sbjct: 273 GY 274


>gi|149002896|ref|ZP_01827807.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237649459|ref|ZP_04523711.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821133|ref|ZP_04596978.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758899|gb|EDK65894.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 486

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  HSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWIIQKKDGYPTY---NFAVAIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|73540566|ref|YP_295086.1| valyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|90101548|sp|Q474E1|SYV_RALEJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72117979|gb|AAZ60242.1| Valyl-tRNA synthetase, class Ia [Ralstonia eutropha JMP134]
          Length = 955

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 68/241 (28%), Gaps = 40/241 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        GI        K     I+    N TG +H+GH     + D L       G
Sbjct: 19  AKWGPEWEKRGIAQPTFDPAKPD-FAIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMLG 77

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                    + AG   QI      V  R  +A              GV    +G+E   K
Sbjct: 78  ANTLWVPGTDHAGIATQI------VVERQLEA-------------QGVSRHDLGRE---K 115

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           ++ ++  + EE    I +              ++ +    D               + ++
Sbjct: 116 FTEKVWAWKEESGSTITRQ-------------VRRMGASIDWTREYFTMSPDMSKAVTEV 162

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--GSYTYF 334
              L  QG +Y G               D +            +  PL+++D  G  T+ 
Sbjct: 163 FVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVEEDGFLWHIRYPLVEADAKGGLTHL 222

Query: 335 A 335
            
Sbjct: 223 T 223


>gi|23501876|ref|NP_698003.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225627473|ref|ZP_03785510.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701747|ref|ZP_05163575.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706809|ref|ZP_05168637.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710081|ref|ZP_05171892.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714082|ref|ZP_05175893.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716862|ref|ZP_05178673.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031577|ref|ZP_05445191.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|260168708|ref|ZP_05755519.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218663|ref|ZP_05932944.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261314276|ref|ZP_05953473.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317630|ref|ZP_05956827.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321839|ref|ZP_05961036.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261752300|ref|ZP_05996009.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261758184|ref|ZP_06001893.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988665|ref|ZP_06101222.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|25009345|sp|P59078|SYM_BRUSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23347815|gb|AAN29918.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225617478|gb|EEH14523.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260923752|gb|EEX90320.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294529|gb|EEX98025.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296853|gb|EEY00350.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303302|gb|EEY06799.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738168|gb|EEY26164.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261742053|gb|EEY29979.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|264660862|gb|EEZ31123.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|68485740|ref|XP_713248.1| hypothetical protein CaO19.2415 [Candida albicans SC5314]
 gi|46434729|gb|EAK94131.1| hypothetical protein CaO19.2415 [Candida albicans SC5314]
          Length = 509

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 134/403 (33%), Gaps = 68/403 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWR 184
           + +PTG +H+G  R A+    LA     +G E        D    +    + +  ++ W 
Sbjct: 45  APSPTGFLHLGSLRTALYNYLLA---KSTGGEFILRIEDTDRNRLVPGAEDNIINTLKWC 101

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                       P G Y     KH+      KY++ELL+          K Y  +  +  
Sbjct: 102 NLHIDEGPVEGGPYGPYRQSDRKHI----YQKYANELLSKGL-----AYKCYCSKERLLE 152

Query: 245 IRDDLKAL----NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +R+  + L    N+ +D     +  H G P  IR       +    Y         + + 
Sbjct: 153 LRESAQRLKPPTNVTYDRKCISESEHEGLPYVIR------FKSPNNYPPFRDLLHGELSL 206

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSD 359
           +   + K   F         D  ++K+DG  TY  A++       +     + +V+ G +
Sbjct: 207 QPQYNDKDRRFD--------DFVIVKNDGMPTYHFANV------IDDHLMKITHVVRGEE 252

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------ITL 410
                 +  A+  A+  +  Q        + L       K+SKR+GD          I  
Sbjct: 253 WLPSTPKHIAMYHAMGWEPPQYIH-----IPLLTSLKDKKLSKRSGDLNILKLKDEGILP 307

Query: 411 RHVVDEVG--------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             +V+ V         S+  +F  +   +  +  F   ++ + + +     + Y      
Sbjct: 308 EALVNFVALFGWSPVRSNGEKFNEVMDLSDIIELFSIDQLTKGNAKVNDSKLYY-----F 362

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           +    AK +      +       P   +F     + +  L ++
Sbjct: 363 NKLHLAKKLESAEGLETLVEEYYPHFKQFSNQSKEYLYKLLKF 405


>gi|332284658|ref|YP_004416569.1| valyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428611|gb|AEC19945.1| valyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 950

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 77/273 (28%), Gaps = 54/273 (19%)

Query: 97  YLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +  +         G         +     I+F   N TG +H+GH     V D L     
Sbjct: 26  WYAQWERKGYFTGGRHVAPANPDQSKPFVIQFPPPNVTGTLHMGHAFNQTVMDGLVRYHR 85

Query: 156 FSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
             G +       + AG   QI                                  V +  
Sbjct: 86  MRGDDTVFIPGTDHAGIATQI----------------------------------VVERQ 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D  +    +   EK++  V ++  ++    I +  + L    D    + ++   D +  
Sbjct: 112 LDAQNVSRHDLGREKFVDKVWEWKQKSG-NAITEQFRRLGSSCD---WDREYFTMDDNLS 167

Query: 274 RDIID---NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DG 329
           R +++    L  QG +Y G               D + +         ++  PL K  DG
Sbjct: 168 RGVVETFVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGFMWEIRYPLTKPVDG 227

Query: 330 ---------SYTYFAADLAYFKCKYERGFDNMI 353
                           D+A      +  + ++I
Sbjct: 228 ISCLVVATTRPETMLGDVAVMVHPEDERYAHLI 260


>gi|317126833|ref|YP_004093115.1| glutamyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471781|gb|ADU28384.1| glutamyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 485

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 99/297 (33%), Gaps = 40/297 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R     +       L  S+ 
Sbjct: 10  APSPTGHLHIGGARSALFNYLFARNQNGKFIVRIEDTDQAR-----NVDTATEKLLNSLK 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +   + D   P   Y  +    +      KY  +L+   +  +   + +  ++A  
Sbjct: 65  WLGIEWDESVDIGGPHAPYKSMERIDI----YKKYIDQLIEEGK-AYYCYMTEEELEAER 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R              S  D  R   +  R+  +   R+  V       P++KT    
Sbjct: 120 EEQR------GRGETPKYSGRD--RHLTAEQRNAYEQEGRKPVVR---FLVPENKTIVVD 168

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     + + DG  TY   + A     Y     ++I   G +H  
Sbjct: 169 DIVRGNVTFDSDGIGDF---VIARKDGIPTY---NFAVVIDDYLMEISHVIR--GEEHLS 220

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              R   +  A+  +  +          L  +    KMSKR    I       ++G 
Sbjct: 221 NSPRQVLLYEALGWETPRFAH-----ASLILNEDHKKMSKRDESIIQFVEQYRDLGY 272


>gi|221199257|ref|ZP_03572301.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205841|ref|ZP_03578856.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174679|gb|EEE07111.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180542|gb|EEE12945.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 945

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 99/313 (31%), Gaps = 49/313 (15%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEKSGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ----LIVHLAEY 505
                   Y R R+  R       D D+       + +  E D   +     L   L  Y
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAQHAVP-LDEWLEIDRYAVAFSAQLQTELLAY 722

Query: 506 PRVIENATIAQEPYKLA----FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                      E + +      Y    +    G +    ++ RL     ++R     +  
Sbjct: 723 -------YEKYEFHPVVAKLQTYC---SEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTA 771

Query: 562 LVHAVA---SIIN 571
           L H       ++ 
Sbjct: 772 LYHLTQGLLRVLA 784


>gi|161507942|ref|YP_001577906.1| leucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260103261|ref|ZP_05753498.1| leucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|229470715|sp|A8YWU4|SYL_LACH4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160348931|gb|ABX27605.1| Leucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260082930|gb|EEW67050.1| leucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328464566|gb|EGF35935.1| leucyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 804

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++ +L      Y   ++  T   
Sbjct: 648 KNDGELDKV---YAETVKKVTEDF 668


>gi|62289919|ref|YP_221712.1| methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699846|ref|YP_414420.1| methionyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024161|ref|YP_001934929.1| methionyl-tRNA synthetase [Brucella abortus S19]
 gi|254697361|ref|ZP_05159189.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730259|ref|ZP_05188837.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260545332|ref|ZP_05821073.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260757954|ref|ZP_05870302.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761777|ref|ZP_05874120.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196051|gb|AAX74351.1| MetG, methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615947|emb|CAJ10970.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Methionyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189019733|gb|ACD72455.1| methionine--tRNA ligase [Brucella abortus S19]
 gi|260096739|gb|EEW80614.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260668272|gb|EEX55212.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672209|gb|EEX59030.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|297571136|ref|YP_003696910.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931483|gb|ADH92291.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 890

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 58/186 (31%), Gaps = 35/186 (18%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++ GSD+VR+     +      FD  ++K          
Sbjct: 596 DPDRKKMSKSKGNVVTPMGLLEKHGSDAVRYWAASARLGTDAAFDEQQMK------IGRR 649

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +            Q       +D D             +  +  ++  LA    V+E AT
Sbjct: 650 LAMKLLNASKFALQMGGAGVKVDLDSSAV--------TEPIDRAMLAELAG---VVEQAT 698

Query: 514 IAQEPYKLAFY----LYDLASV-FHGHWSHGRENPRLRFVQ--------ANNRKLTMMRL 560
            A E      Y      +++   F        E  + R                +   R+
Sbjct: 699 QAYE-----NYDHTRALEVSETCFWTFCDDYLELVKDRAYDRDGKYAQAGQEGAVRSARV 753

Query: 561 QLVHAV 566
            L  AV
Sbjct: 754 ALNLAV 759


>gi|297569842|ref|YP_003691186.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925757|gb|ADH86567.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 510

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 70/427 (16%), Positives = 138/427 (32%), Gaps = 92/427 (21%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH   AVV DT++      G EV  +   ++ G +I   A +      
Sbjct: 11  YVNAQP----HLGHAYTAVVADTVSRFNRLDGREVFLQTGTDEHGDKIAQAAATA----- 61

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                       G     Y+  +       +   L+    + ++     + V  + +I++
Sbjct: 62  ------------GTEARDYVDRISAMFRAAWPPLLVE--PDNFIRTTDPHHVAVVQQILQ 107

Query: 247 DDLKALNIQH-----------DIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
                 +I             + F++E +   G         + +A Q Y      Y+  
Sbjct: 108 KVYDRGDIYFSDYDGLYCKGCERFLTEKELVDGKCPDHLTAPEQVAEQNYFFAMSRYQQW 167

Query: 291 LPPPKSKTTQKCDMDRKQ---LLFRSTMVGDD-VDRPLLKSD-GSYTYFAADLAYFKCKY 345
           L        +    +R +   L F S  + D  + RP+ +   G    F      +    
Sbjct: 168 LIDHIKANPEFITPERYRNEVLSFLSEPLEDLCISRPVSRLAWGIPLPFDQRFVTYVW-- 225

Query: 346 ERGFDNMIYVM----------------GSDH-------SGYVKRLEAVAAAVSEKKAQIN 382
              FD +I  +                G++H         +      +  A+  +  +  
Sbjct: 226 ---FDALINYVSGIGYPDGPDFARRWAGAEHLIAKDILKPHAIFWPTMLKAMGLEPYRRL 282

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +         +    KMSK  G+ +    +V   G+D++R+ +L R+ S  LD  +   
Sbjct: 283 HVHGYW-----NVGETKMSKSIGNVVRPEEMVAAFGADTIRYFLL-REMSFGLDSSYSDE 336

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL---- 498
              ++ N            RS+               F  + +P     +  + +L    
Sbjct: 337 AVLARRNSDLANDLGNLFARSL----------TMVKNFADSQVPAPGPLNDEDRELRDAA 386

Query: 499 IVHLAEY 505
           +  LAEY
Sbjct: 387 LAMLAEY 393


>gi|91789567|ref|YP_550519.1| valyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698792|gb|ABE45621.1| valyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 973

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 98/333 (29%), Gaps = 69/333 (20%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ +      +     +Y   L       +I+    N TG +H+GH     + D+L  
Sbjct: 40  FEPAAIESRWGPLWEQSGQYEPTLDAAKPSFSIQLPPPNVTGTLHMGHAFNQTIMDSLTR 99

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G+        + AG   QI      V  R  Q    +  DL              
Sbjct: 100 YHRMRGHNTLWVPGTDHAGIATQI------VVERQLQGEGKSRHDL-------------- 139

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                       NF  + W    K+ S   + + +R    +++ +H+ F           
Sbjct: 140 ---------GRKNFVAKVWE--WKEESGSTITRQMRRMGDSVSWKHEYF----TMDPKMS 184

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           + + +    L  QG +Y G          +    D +            +  PL    GS
Sbjct: 185 TVVTETFVRLYEQGLIYRGKRLVNWDPILKSAVSDLEVESEEEDGFLWHIRYPLADGSGS 244

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            T           + E        ++G            VA  V  +  +   L+ +LV+
Sbjct: 245 LTVATT-------RPET-------MLGD-----------VAVMVHPEDERYRHLIGQLVK 279

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           L        +  R    I   +V  E G+  V+
Sbjct: 280 LP-------LCDREIPVIADDYVDKEFGTGVVK 305


>gi|34556660|ref|NP_906475.1| methionyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|34482374|emb|CAE09375.1| METHIONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 649

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 79/485 (16%), Positives = 152/485 (31%), Gaps = 97/485 (20%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL----------------- 179
           H+GH    ++GD+LA      G+E       ++ G +I   A                  
Sbjct: 19  HIGHAYTTMIGDSLAHYYRLIGHETFFLTGTDEHGQKIEQSAQKKGKTPQAYADEISGAF 78

Query: 180 -SVFWRYQ---------------------QALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
            S++ R++                             D+ +G Y G Y          + 
Sbjct: 79  KSLWDRFEISYDHFIRTTDAKHKQGVQKAFLKMFEKGDIYKGEYEGHYCVSCETFFTKRQ 138

Query: 218 SSELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
             + L  PE  K   +VK+ S    +   ++ L A   ++   I            +   
Sbjct: 139 LVDDLYCPECGKETSLVKEESYFFALSRYQEKLLAWYKENPDCILPKPKKNEVMRFVESG 198

Query: 277 IDNLARQGYVYEGILPPPKS----KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +D+L+     ++  +  P+     K      +D       +   GDD  R          
Sbjct: 199 LDDLSITRTSFDWGVKLPQEMNAPKHVMYVWLDALLNYVTALGYGDDEKR---------- 248

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389
                + ++  +        ++++G D    + R  A+   A  +S        +     
Sbjct: 249 -----MDFWPAR--------VHLVGKD----ILRFHAIYWPAFLMSLDLPLPKHVAAHG- 290

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              R+G   KMSK  G+ I  + V D  G +  R+ ML R+     D DF +     + N
Sbjct: 291 WWTRNGA--KMSKSVGNVINPQEVADAYGVEPFRYFML-REVPFGQDGDFSQKALIDRLN 347

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEYPRV 508
                         + R         D+ +  + V      E   +EL L          
Sbjct: 348 SDLSNDLGNL----LNRLGGMSGKYFDYQITSKEVTTFHAKELQEAELIL--------DS 395

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           +       +P++   YL +L  +F    ++        +      K +   + LV  +A+
Sbjct: 396 LHGYIQEMQPHR---YLEELWKIFTI--ANTAIAMHEPWKLMKEGKESQA-MALVALIAN 449

Query: 569 IINSG 573
           ++   
Sbjct: 450 LLAKA 454


>gi|114319716|ref|YP_741399.1| valyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226110|gb|ABI55909.1| valyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 917

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +   +       +  +  G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PQAIEEKWYAYWEEHGHFAPSGEGEPYCIMI--PPPNVTGTLHMGHAFQDTIMDALIRYQ 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                                 +   
Sbjct: 65  RMCGRNTLWQPGTDHAGIATQMVV--------------------------------ERQL 92

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +       +   EK+L  V  +  ++   I R  L+ +    D          G    +R
Sbjct: 93  EAEGKSRFDLGREKFLERVWQWKAESGGTITRQ-LRRMGASVDWSRERFTMDEGLSRAVR 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L   G +Y G               D +
Sbjct: 152 EVFVRLYEDGLIYRGKRLVNWDPVLHTAVSDLE 184


>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 562

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 120/365 (32%), Gaps = 53/365 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D L   +   GYEV    Y+         +   +  R  +         
Sbjct: 100 HIGHARVYVTFDVLLRYLKHLGYEV---SYV----RNFTDVDDKIIARANEL-------- 144

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLK---A 251
                 G     + +   +++  ++      +    P+V D+  Q ++ +I+  L    A
Sbjct: 145 ------GEDPISLSRRFCEEFKRDMEQLQCLDPSVQPLVSDHIPQ-IVDLIKQILDNGYA 197

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  DI+ S D F        R + DN A +    +     P      K   + +    
Sbjct: 198 YKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKTAKEGEPFW- 256

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                    + P  +    +    + +  AY    ++     M  ++   H   + +  A
Sbjct: 257 ---------ESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGM-DLVFPHHENEIAQSCA 306

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                    + I+  +             KMSK  G+F T+R V+D     ++R  ++  
Sbjct: 307 AC-----DSSNISYWIHNGFVTVDS---EKMSKSLGNFFTIRQVIDLYHPLALRLFLMGT 358

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                +++    ++  S+   +FY+      C S+     +       D  P + +   +
Sbjct: 359 HYRSPINYSDFLLESASER--IFYIYQTLHDCESLL---GEKDSTFGNDSVPSDTLTTIN 413

Query: 490 EFDTS 494
            F + 
Sbjct: 414 TFHSE 418


>gi|257456235|ref|ZP_05621432.1| glutamyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446321|gb|EEV21367.1| glutamyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 507

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 94/278 (33%), Gaps = 29/278 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  H+G  R A+     +     +G +        D          +++      
Sbjct: 8   APSPTGLQHIGGVRTALFNYLFSR---ATGGKFILRIEDTDQTRYAAEYETNLYDTLDWL 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D   P G     Y++    E+  +Y+ +L+      +     +  ++ + KI    
Sbjct: 65  GIDWDEGGPRGGPYAPYIQSQRSEIYREYADKLVKSG-HAYYCFCDEERLERIRKIQ--T 121

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +  +   +D         R   +  ++ ID     G  Y   L  P   TT   D+    
Sbjct: 122 MNKMPPGYD---------RHCRNLTQEEIDANIAAGKPYVIRLKVPLEGTTVFHDVLLGT 172

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS-DHSGYVKRL 367
           + +++  +    D  LLKSDG  TY  A++       +     + +VM + +        
Sbjct: 173 IEWKNEDINP--DPILLKSDGFPTYHLANV------VDDHLMKITHVMRAQEWVPSTPMH 224

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             +  A   +      L   +          K+SKR G
Sbjct: 225 VLMYQAFGWEHPDFCHLPMVMGNDGH-----KLSKRHG 257


>gi|157147738|ref|YP_001455057.1| valyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157084943|gb|ABV14621.1| hypothetical protein CKO_03542 [Citrobacter koseri ATCC BAA-895]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|117919580|ref|YP_868772.1| valyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|117611912|gb|ABK47366.1| valyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 958

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKSRHDLGRDAFMEKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|13541592|ref|NP_111280.1| leucyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|48428561|sp|Q97AN8|SYL_THEVO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14324988|dbj|BAB59914.1| tRNA synthetase Leu [Thermoplasma volcanium GSS1]
          Length = 910

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 64/238 (26%), Gaps = 39/238 (16%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++N+     +        V          I +  K  I        G +HVGH R   +G
Sbjct: 16  YMNI--DEKWQNAWERDHV------FEPKIDERKKFMITVPWPYTNGSLHVGHGRTYTLG 67

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +A       Y V   + +    +    LA S   R   A                   
Sbjct: 68  DIIARYKRSRNYNVL--FPMGFHQSGTPILAFSERIRAGDAST----------------- 108

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDF 265
                L   Y SE      + WL   KD           I +D K L    D        
Sbjct: 109 ---IALYRSYLSEYGEKDIDGWLEKFKDPRNIADYFSNAIINDFKHLGYSIDWTRKFTSA 165

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                + ++     L  +G + +   P   S       +D    +    +   D D+ 
Sbjct: 166 DEFYQNVVKWQFHKLNEKGLIKQDKYPILYS-------IDDDNAVGEDDIKDGDTDKV 216


>gi|172035425|ref|YP_001801926.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171696879|gb|ACB49860.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 482

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 118/335 (35%), Gaps = 50/335 (14%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           IE G+  +        ++         H+GH R  +V D +   + + GY+VT      D
Sbjct: 19  IEEGKVKMYCCGITVYDYC--------HLGHARTCIVWDVVRRYLQWRGYDVTYIQNFTD 70

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              +I         R ++      S+     Y    ++ +    AD Y            
Sbjct: 71  IDDKILN-----RARQEKTTMEAVSERFIEAYF-EDMECLNVAKADAYPRATHTLN---- 120

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   +Q ++  +     A   + D++ +   F        R  +++L        G
Sbjct: 121 -------GIQRLVSELEAKGYAYASEGDVYYNVHQFKPYGKLSGRK-LEDLQAGA---SG 169

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +    ++ ++K D     +  +S   G+   D P  K  G   +     A  + +    
Sbjct: 170 RVAVEDAEASKKKDPADFAVW-KSAKPGEPAWDSPWGK--GRPGWHIECSAMVRERLGET 226

Query: 349 FDNMIYVMGSD-----HSGYVKRLEAV-AAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            D  I+V GSD     H   + + EA     ++        L   +V++       KMSK
Sbjct: 227 ID--IHVGGSDLIFPHHENEIAQSEAATGKPLARYW-----LHNGMVKVG----GEKMSK 275

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
             G+F T+R ++++    +VR  +L     + +DF
Sbjct: 276 SLGNFTTIRELLEKFDPMAVRLFILQAHYRKPVDF 310


>gi|114046707|ref|YP_737257.1| valyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|113888149|gb|ABI42200.1| valyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 958

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEQGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKSRHDLGRDAFMEKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|307710204|ref|ZP_07646648.1| glutamyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619184|gb|EFN98316.1| glutamyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     +L  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----DLYQKYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 468

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 115/376 (30%), Gaps = 61/376 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D   +I         R       +  +L
Sbjct: 30  HLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTDIDDKI--------IRRANETGEDPKEL 81

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E +    Y     K L  K +       E              +  II         + 
Sbjct: 82  AEKFLK--YFLEDMKALKVKPADIYPRVTE-------------HIQDII---------EF 117

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK-----TTQKCDMDRKQLLF 311
              + E  +  G    +   +    + G + +  L   +          K + +   L  
Sbjct: 118 VRKLEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPEDFALWK 177

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKR 366
           ++       + P    +G   +               FD  I+  G+D     H   + +
Sbjct: 178 KAKPGEPKWESPW--GEGRPGWHIECSTMSTKYLGESFD--IHGGGNDLIFPHHENEIAQ 233

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            EA        K  +         +       KMSK  G+F+T+R ++     + +RF +
Sbjct: 234 TEAC-----TGKEWVKYWFHTGFVMVSG---EKMSKSLGNFVTIRELLQRYSPEVIRFFV 285

Query: 427 LWRKNSELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQAKDIFPDLDF--DL 479
           L +     LD+    ++          N +  ++ A  +    F+  K+ F   +   D 
Sbjct: 286 LQKHYRSPLDYTEEGIQHAKNNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRDA 345

Query: 480 FPRNVIPQESEFDTSE 495
             +     + +F+T+E
Sbjct: 346 KKKLYEAMDDDFNTAE 361


>gi|120603281|ref|YP_967681.1| valyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120563510|gb|ABM29254.1| valyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 884

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 104/348 (29%), Gaps = 46/348 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +           +  ++   G   +I     N TG +H+GH    V+ D L       G
Sbjct: 16  EERWRRHWEDNRTFTPDMDAPGEPYSIVIPPPNVTGALHIGHALNHVLIDVLCRNARQQG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V      + AG  I T  +      ++ L  +D                  +  ++Y 
Sbjct: 76  KKVLWLPGTDHAG--IATQNVVERALAKEGLSRHD-------LGREAFIERVWQWKEEYG 126

Query: 219 SELLNF---------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           + +LN             +    + +   +A+ K+  D      I    +I  +  +R  
Sbjct: 127 NRILNQIRMLGDSVDWTRERF-TMDEGLSKAVRKVFVDLYNGGYIYRGNYII-NWCNRCH 184

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----------GDD 319
            +   D +D++  QG++Y           +      R + +   T V          G  
Sbjct: 185 TALADDEVDHMPEQGHLYHVRYDFEDGSGSVVIATTRPETIMADTGVCVHPEDERYAGLI 244

Query: 320 VDRPLLKSDGSY------TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
             + L+   G        TY   +      K     D   + +G  H     +       
Sbjct: 245 GKKILVPVIGRAVPLFADTYVDREFGTGALKVTPCHDPNDWTLGERHGLAFIQCI----- 299

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMS---KRAGDFITLRHVVDEVG 418
             ++   +         L ++    ++    + +G  + +  +   VG
Sbjct: 300 --DEDGNMTAEAGPYAGLTKEECRKRIVADLEASGQLVRVEELNHSVG 345



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 335 AADLAYFKCK--YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DLA F        GFD +++         V R+  +     ++    +V L  LV   
Sbjct: 470 TKDLATFYPTSVLVTGFD-ILFFW-------VARMMMLGMHFMDEVPFKHVYLHALV--- 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           RDG   KMSK  G+ I    ++D+ G+DS+RF +
Sbjct: 519 RDGEGRKMSKSTGNVIDPLAMIDKYGTDSLRFTL 552


>gi|115524873|ref|YP_781784.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518820|gb|ABJ06804.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 518

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 100/325 (30%), Gaps = 36/325 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA      G +V      ++ G ++   A             
Sbjct: 20  PNGVPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQKEGLTPHDLATR 79

Query: 192 NDSDLPE--GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRD 247
           N     E        Y + +       + S      +E W  ++K  D  + +       
Sbjct: 80  NAGRFREMDDKLNVSYDRFIRTTEEQHHRS-----SQEIWRRMLKNGDIYLDSYAGWYSV 134

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCDMD 305
             +A   + +  + ED   RG      + ++  +   +   Y+  L    +        D
Sbjct: 135 RDEAYYAEDETTVGEDKVRRGPQGSPVEWVEEKSYFFKLSAYQDKLLKLYADQPDFIGPD 194

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY----------------ERGF 349
            ++    S + G   D  + ++   +     D                        E   
Sbjct: 195 SRKNEVVSFVKGGLKDLSVSRTTFDWGIKVPDEEGHVMYVWVDALTNYITGVGFPDETDP 254

Query: 350 DNM-----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +       ++V+G D    + R  AV        A I V        +      KMSK  
Sbjct: 255 NWRYWPADLHVIGKD----IIRFHAVYWPAFLMSAGIPVQKRVFAHGFLFNRGEKMSKSV 310

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +   ++ ++ G D +R+ +L  
Sbjct: 311 GNVVDPFNLAEQYGVDQLRYFLLRE 335


>gi|322378728|ref|ZP_08053158.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380011|ref|ZP_08054276.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147563|gb|EFX42198.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148846|gb|EFX43316.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 632

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 124/413 (30%), Gaps = 39/413 (9%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH     + D L    +  G EV      ++ G +I   AL       +   N     
Sbjct: 35  HLGHAYTTFIADMLKKYYSLQGEEVFLLTGTDEHGQKIAQSALKHNLSPLEYASNVSRLF 94

Query: 197 P-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL--N 253
             +  Y  +   H  +    ++   +    E+ +     D              ++    
Sbjct: 95  KNQWDYFKIDYNHFVRTTDSQHKEAVQKAFEKMYQKG--DIYKGMYQGSYCVSCESFVTT 152

Query: 254 IQHDIFISEDDFHRGDPS--PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
                   E      +     + +  D L    + +   + P   +      +++     
Sbjct: 153 THCPDCNRESTLVEEESYFFKLSNYQDRLLDFYHTHPKAIYPLFRRNEVLRFIEQGLYDL 212

Query: 312 RSTMVGDDVDRPL---LKSDGSYTYFAAD--------LAYFKCKYERGFDNMIYVMGSDH 360
             T    +    L   LK      Y   D        L Y K      F + I+V+G D 
Sbjct: 213 SITRTSFEWGIALPSSLKESKHVVYVWLDALLNYVSALGYGKGANLECFKHTIHVVGKD- 271

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                 +  VA  +S +       LC       DG  +KMSK  G+ +  + +    G++
Sbjct: 272 ILRFHAIYWVAFLMSLELPLFE-RLCVHGWWTIDG--VKMSKSLGNVLDAQDLAKTYGTE 328

Query: 421 SVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           ++R+ +L      +  DF    +  +S  +       +      + R            L
Sbjct: 329 TLRYFLLREVPLGQDGDFSLQALIRRSNAD------LSNTLGNLVQRVLGMASQYFGGKL 382

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
               V+   +        L+  L +       +    +P++   YL DL  +F
Sbjct: 383 ESEGVLTHYAFLYQQLQDLLNSLDQ-------SMQEMQPHR---YLEDLWKIF 425


>gi|291165636|gb|EFE27685.1| glutamate--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 495

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 71/430 (16%), Positives = 137/430 (31%), Gaps = 96/430 (22%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R       GA    L    +
Sbjct: 7   APSPTGFVHIGSLRTALYNYLYAKKTGGTYVLRVEDTDQSRLV----EGAVEGMLKAMKW 62

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  + + +  + +    G Y++    ++  KY  +LL      +        + 
Sbjct: 63  AGVVNEEGVVLSEEGKVTQAGDCGPYVQSERLDIYKKYIDQLLESG-HAYYCFCSKDRLD 121

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKS 296
            + +I R               E+   R D       ++ +      G  Y   L  P +
Sbjct: 122 KVREIQRA--------------ENKVPRYDGHCKGLTKEEVQAKIDAGEPYVIRLKLPAN 167

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K     D+ R  ++  +  +    D+ L+KSDG  TY     A     Y  G  ++I   
Sbjct: 168 KDLHFKDIVRGDVVINTNDMD---DQVLMKSDGFPTYHF---AVVVDDYLMGITHIIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-------- 408
           G +      +   +  A   ++    V L  ++         K+SKR GD          
Sbjct: 220 GEEWLPSTPKHVYLYEAFGWEQPTY-VHLPNILNH----DHKKLSKRQGDVAVEDFRKKG 274

Query: 409 ---------------TLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVF 452
                          +     +    D +  +  L R +     FD  K+   +      
Sbjct: 275 YLPEALINYIALLGWSPEDNQEVFSMDELEQYFSLERVSKSGGVFDVAKLNWFNN----- 329

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFD---LFPRNVIPQESEFDTSEL-QLIVH------- 501
             QY          + +DI   +D     L  ++++ +E      E   L +        
Sbjct: 330 --QYI---------RERDINELVDLSIPFLVEQDLMTEEEANSKKEWLALAMETVRESMD 378

Query: 502 -LAEYPRVIE 510
            LA++P  I+
Sbjct: 379 YLAQFPERIK 388


>gi|239917380|ref|YP_002956938.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414136|ref|ZP_06245878.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838587|gb|ACS30384.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 541

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 100/339 (29%), Gaps = 50/339 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A        +    
Sbjct: 17  PNGEPHIGHAYEYIATDAMARFQRLDGRDVRFLTGTDEHGQKMEQTAQQQGVSALELATR 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N +   E       +  +     D++         E    I +   ++A   I       
Sbjct: 77  NAAVFKE---MDDDVLDIS---YDRFIRTTDTDHAEAVREIWRR--MEANGDIYLGSYAG 128

Query: 252 LN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC------DM 304
              ++ + +  ED+   G    +R  ++      +  E       SK  Q          
Sbjct: 129 WYSVRDERYFGEDETEVGQDG-VRRAVETGTEVTWTEEESYFFRLSKYQQPLLDHYRDHP 187

Query: 305 DRKQLLFRSTMVGDDV-----DRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVM-- 356
           D     +R   V   V     D  + ++   +     A         +R  D++ YV   
Sbjct: 188 DFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPEAADADRRADHVTYVWVD 247

Query: 357 -------GSDH--------------SGYV-----KRLEAVAAAVSEKKAQINVLLCELVR 390
                  G+                  +V      R   +        A + +    ++ 
Sbjct: 248 ALTNYLTGAGWPAGDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLELPHRVMIH 307

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            + +    KMSK  G+ +  R  V   G D++RF +L  
Sbjct: 308 GFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLRE 346


>gi|284993718|ref|YP_003415486.1| hypothetical protein LM5923_0278 [Listeria monocytogenes 08-5923]
 gi|284059185|gb|ADB70124.1| hypothetical protein LM5923_0278 [Listeria monocytogenes 08-5923]
          Length = 491

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 105/308 (34%), Gaps = 43/308 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLP 231
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    ELL+     K   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQELLDKDLAYKCYC 112

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             ++  V+   +    ++   + +      E                    QG+      
Sbjct: 113 TEEELDVEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRF 159

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     +
Sbjct: 160 KVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISH 213

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   +  A   +      +      L  +    K+SKR G  I   
Sbjct: 214 VLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFI 266

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 267 EQYRDLGY 274


>gi|219124456|ref|XP_002182519.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405865|gb|EEC45806.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 899

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +   K       L+ + + L  DG   KMSK  G+
Sbjct: 624 LYVGGAEHAVLHLLYARFWHQVLFDLGYTKHPEPFQKLVHQGMILGSDGE--KMSKSRGN 681

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V E G+D++R
Sbjct: 682 VVNPDDIVGEQGADALR 698


>gi|327289916|ref|XP_003229670.1| PREDICTED: probable glutamyl-tRNA synthetase, mitochondrial-like,
           partial [Anolis carolinensis]
          Length = 392

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 97/289 (33%), Gaps = 47/289 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ---INTLALSVFWRY 185
           + +PTG +H+G  R A+     A     +G  + R   + D   Q   ++  A  +    
Sbjct: 16  APSPTGFLHLGGLRTALYNYLFAR--KHNGRFLLR---LEDT-DQSRLVDGAAQGIEDML 69

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------KWLPIVKDYSV 238
           + A  + D     G   G YL+     L  + S  LL+           + L ++K  ++
Sbjct: 70  EWAGISPDESPRRGGSVGPYLQSQRLGLYREASDFLLDKGAAYRCFCTPRRLELLKKEAL 129

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +       D            +S               +     QG              
Sbjct: 130 RNRQTPRYD-------NRCRHLSPSQVEEKLSQGTDHAVRFRLEQG-------------- 168

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            ++  +D      R  +   + D  +LKSDG  TY    LA     +  G  +++   G+
Sbjct: 169 AEEPFLDLVYGWSRHEVSSVEGDPVILKSDGFPTYH---LANVVDDHRMGISHVLR--GT 223

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +      +   +  A   +  +   L    + L RDG   K+SKR GD 
Sbjct: 224 EWLTSTSKHLLLYRAFEWQPPRFGHL---PLLLNRDG--SKLSKRQGDL 267


>gi|311694204|gb|ADP97077.1| valyl-tRNA synthetase [marine bacterium HP15]
          Length = 950

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 71/243 (29%), Gaps = 36/243 (14%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +       S   +  +  G+G   +I     N TG +H+GH     + DTL    
Sbjct: 7   PENIERQWYENWESKGYFRPS--GEGQSYSIAIPPPNVTGSLHMGHAFQHTIMDTLTRFK 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + AG     +                               V ++LA
Sbjct: 65  RMQGRNALWTVGTDHAGIATQMV-------------------------------VERKLA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +      +   E+++  + D+   +   I R  ++ L    D          G    ++
Sbjct: 94  AEEDKTRHDLGREEFIKRIWDWKEHSGGTITRQ-IRRLGNSVDWDNERFTMDDGFYKAVQ 152

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           ++   L  +G VY G               D +            +  PL  +DG+ T  
Sbjct: 153 EVFIRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEEKGFFWHLRYPL--ADGTQTQD 210

Query: 335 AAD 337
             D
Sbjct: 211 GKD 213


>gi|283954409|ref|ZP_06371929.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794026|gb|EFC32775.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 625

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 65/466 (13%), Positives = 140/466 (30%), Gaps = 62/466 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ DTLA      G+E       ++ G +I   A    +  Q+      S+ 
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNFTPQEYADKISSEF 75

Query: 197 PEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDLKALN 253
            + +        +     D ++   +     + W    I KD                  
Sbjct: 76  KKLWDEFEITYDIYARTTDIRHIEFVKAMFLKMWQKGDIYKDEYEGHYCVSCESFFTQSQ 135

Query: 254 IQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYEGI 290
           + ++            + E+ +          I+     +              +V  G+
Sbjct: 136 LINEYSCPDCGKQTRILKEESYFFKLSKYQDKILQWYQEKDPILPKNKKNELVNFVQNGL 195

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGF 349
                ++T+    +   Q       + DD     +  D  + Y ++ D        +   
Sbjct: 196 KDLSITRTSFDWGIKLPQ------EINDDKHIVYVWLDALFIYVSSLDFQCKGENAKFWP 249

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            + ++++G D    + R  A+          + +        +      KMSK  G+ + 
Sbjct: 250 AH-VHLVGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVK 304

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
            + +VD  GS++ R+ +L R+    +D DF +    ++ N     ++     R I     
Sbjct: 305 PKEMVDAYGSEAFRYFLL-REVPFGIDGDFSENMLINRINAELSNEFGNLLNRII----G 359

Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                   ++   NV+     E       L L V                +  +   YL 
Sbjct: 360 MSIKYSQGNISKENVLKFYNAELNQTKEHLNLAVEFL----------ENLQCNR---YLE 406

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
           +L            +      ++ N  +     + L    A+I+  
Sbjct: 407 ELFKALSVANLAISKYEPWNLIKENKHEQANALIALC---ANILAK 449


>gi|224824629|ref|ZP_03697736.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603122|gb|EEG09298.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 927

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 123/383 (32%), Gaps = 56/383 (14%)

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQH 256
           G+  +  G E+  + +   ++  E  + P      ++AM        + R     + +  
Sbjct: 421 GMDKQGHGGEVLRERARHAVDATE--FFPGWGRARLEAMIGNRPDWCVSRQRNWGVPMTF 478

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            +     + H      + ++   + +QG    +  E            K   D   + F 
Sbjct: 479 FVHKESGELHPRSAQLLEEVALRIEQQGIEAWFSLEAKDLLGDEAEQYKKLSDTLDVWFD 538

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVA 371
           S               GS  +     A  K + E  +   +Y+ GSD   G+ +      
Sbjct: 539 S---------------GSTHF-----AVLKQRPELAWPADLYLEGSDQHRGWFQSSLLTG 578

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            A   +     +L    V    DG  +KMSK  G+ +  + V D +G+D +R  +     
Sbjct: 579 CATIGRAPYQQLLTHGFVV---DGKGLKMSKSKGNVVAPQKVNDSLGADILRLWVASTDY 635

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           S  L      +K  ++         +Y R R+  R       D D  L          E 
Sbjct: 636 SGELAISDEILKRVTE---------SYRRLRNTLRFLLANLSDFDP-LDNAVPFSDLLEI 685

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYK----LAFYLYDLASVFHGHWSHGRENPRLRF 547
           D   + +   L E  +V          +     +  Y    +      +    ++ RL  
Sbjct: 686 DQYAILMAKELQE--KVTGELYTRYAFHHAVQEIVGYC---SEDLGAFYLDVLKD-RLYT 739

Query: 548 VQANNRKLTMMRLQLVHAVASII 570
            QA++R     +  L H   S++
Sbjct: 740 TQADSRARRSAQTALYHITRSLL 762


>gi|291531784|emb|CBK97369.1| valyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 882

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 59/239 (24%), Gaps = 35/239 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP      L         +   +  K     I     N TG +H GH     + D L 
Sbjct: 8   TYSPKDFEDRLYHEWEEKKYFHAEIDPKKKPYTIVISPPNITGQLHTGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +   A+   +  L +             
Sbjct: 68  RYKRMQGYSAL-------WLPGTDHASIATEAKIVNAMK--EEGLTKDDVGREGFLERAW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E    Y   ++                          LK L    D          G   
Sbjct: 119 EWKKVYGGRIVQQ------------------------LKKLGSSCDWDRERFTLDEGCSK 154

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            ++ +  +L  +G +Y G          +    D +            ++ PL  SDGS
Sbjct: 155 AVQKVFIDLYNKGLIYHGERIINWCPNCKTSISDIECEYEEQDGFFWHINYPL--SDGS 211


>gi|317152459|ref|YP_004120507.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942710|gb|ADU61761.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 888

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 81/274 (29%), Gaps = 48/274 (17%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L+ +Y    + +   S   +   +  +  G G   +I     N TG +H+GH     + D
Sbjct: 6   LAKAYEPWDVEEKWESHWEADKTFTPDPDGPGDPYSIVIPPPNVTGVLHMGHALNLTLQD 65

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G                           +  L+   +D        V  + 
Sbjct: 66  ILCRFHRQQG---------------------------RNVLWVPGTDHAGIATQNVVERQ 98

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + +E   ++      F E  W    K      ++  IR    +++   + F     F   
Sbjct: 99  LKEEGKSRHDLGREKFIERVWE--WKQEKGDRILGQIRRMGASVDWTRECF----TFDDQ 152

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +R++   L RQG +Y+G               D +            +  PL  +D
Sbjct: 153 RARAVREVFVELYRQGLIYKGDYIINWCNRCHTALADDEVEHEPKPGHLYHIQYPL--AD 210

Query: 329 GSYTY---------FAADLAYFKCKYERGFDNMI 353
           GS               D A      +  F+++I
Sbjct: 211 GSGHLVVATTRPETMLGDTAIAVNPEDERFNHLI 244



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     E+    +V +  LV   RD    KMSK  G+ I    ++++ G+D++
Sbjct: 493 WVARMMMMGLQFMERVPFHDVYIHALV---RDEKGKKMSKSTGNVIDPLDMIEKYGADAL 549

Query: 423 RFMMLW 428
           RF +  
Sbjct: 550 RFTLTS 555


>gi|328875647|gb|EGG24011.1| glutamate-tRNA ligase [Dictyostelium fasciculatum]
          Length = 586

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 96/290 (33%), Gaps = 48/290 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A                     +  T  L +    +  
Sbjct: 87  APSPTGSLHLGGLRTALYNYLFAR-------------------KEGGTFILRIEDTDRTR 127

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP---EEKWLPIVKDYSVQAMMKII 245
                +   E       L+  G    +  +   + F    + + LP+ K ++ + + K  
Sbjct: 128 FVEGSAKNLENC-----LEWAGIPYDEGPARPRIEFAPYVQSERLPLYKQHADELVKKGS 182

Query: 246 -------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL-PPPKSK 297
                   + L+ L        S   + R      ++ I+     G  +   L  P  + 
Sbjct: 183 AYYCFCTSERLEVLKANTMGKQSVSIYDRNCLRLSKEEIEKRLANGMSHTIRLKIPHTTP 242

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T+  D+ +  + F ++M+    D+ LLKSDG  TY    LA     +     ++I   G
Sbjct: 243 FTKFNDIVKGSVQFANSMID---DQILLKSDGFPTYH---LASVVDDHHMKITHIIR--G 294

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +      +   +  A               V L  +    K+SKR GD 
Sbjct: 295 EEWISSTPKHVILYEAFGWTPPTFAH-----VPLLLNKDKSKLSKRQGDV 339


>gi|269216114|ref|ZP_06159968.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130373|gb|EEZ61451.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 526

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 99/330 (30%), Gaps = 37/330 (11%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL------- 179
           +V+A P    H+G     V  D +A     +G++V     +++ G ++   A        
Sbjct: 14  YVNAAP----HLGTAYTTVAADAVARYQRMNGHDVAFVTGLDEHGQKVAETAEKHGMTPQ 69

Query: 180 ----SVFWRYQQALYNNDSDLPEGYYPGVYL--KHVGKELADKYSSELLNFPEEKWLPIV 233
               S+   +  A    D    +          + V     D Y    L     +    V
Sbjct: 70  EWCDSMVPAFMDAWKMLDIAFTDFVRTSSDRQTRTVQTFWNDLYEKGYLYKGAYEGWYCV 129

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGI 290
            + +  A   +  DD  A  I  D          G+ +    + +  D L      +   
Sbjct: 130 HEETYYAESDLETDDAGAF-ICPDCKRPVRRMSSGEENWFFKLSEFQDRLLEFYEAHPDF 188

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--------LAYFK 342
           + P   +      +         +    D   PL   +G   Y  AD        + Y  
Sbjct: 189 IRPETRRNEVVAFVKGGLQDLSISRSTFDWGIPLTFDEGHVCYVWADALLAYLTGIGYAD 248

Query: 343 CKYERGFD---NMIY-VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                 FD    M Y  +G D    + R   V        A + V        +      
Sbjct: 249 PDRPGEFDARWPMQYHFVGKD----ITRFHCVIWPAMLMAAGLPVTHTVFGHGFLMVGGE 304

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           KMSK  G+ I    +V   GSD+ R+  L 
Sbjct: 305 KMSKSKGNGIRPADLVSVYGSDAYRYYFLS 334


>gi|302528931|ref|ZP_07281273.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437826|gb|EFL09642.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 875

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 34/219 (15%)

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +   +  +   V E   +       L  L RD    KMSK  G+ I     +D  G+D+
Sbjct: 490 LFFWVVRMMMFGVQEMDGKQPFDHVYLHGLIRDANGKKMSKSRGNVIDPLEWMDAYGADA 549

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF +    N      D     E +  +  F       +  +  + A       D +L  
Sbjct: 550 TRFTLARGANPGA---DMALADEWAAGSRNF-----CTKLWNASKFAMMNGATADGEL-- 599

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY-----DLASVFHGHW 536
               P  +E   S+  ++  LA     ++      +  K+A  LY     +L       +
Sbjct: 600 ----PPAAELTESDRWILGRLAALVSEVDGLFEDFQFAKVANALYQFTWNELCD----WY 651

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
               E  +++  Q +       R   V A   ++   L+
Sbjct: 652 ---LELAKVQLYQGD-----SAR---VEATRKVLGQVLD 679



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 93/331 (28%), Gaps = 69/331 (20%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     +    V+   +  +        +I     N TG +H+GH     + D ++  
Sbjct: 17  DPAAEEAPMYDRWVAAGYFTADASSDKPPFSIVLPPPNVTGSLHMGHALNHTLMDAMSRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+    D        V  + +  E 
Sbjct: 77  RRMQGYEV---------------------------LWLPGMDHAGIATQNVVERQLAGEG 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++     +   EK++  V ++  +   KI+   +K L    D               +
Sbjct: 110 LSRH-----DLGREKFVERVWEWKAEYGGKILGQ-MKRLGDGVDWSRERFTMDENLSKAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYT 332
           + +  N    G +Y            Q    D            DD +   ++  DG  +
Sbjct: 164 QTVFKNFYDAGLIYRAERIINWCPRCQTALSD-----IEVDHSDDDGELVSIRYGDGDAS 218

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
                +     + E        ++G             A AV     +   L+   + L 
Sbjct: 219 -----IVVATTRAET-------MLGD-----------TAVAVHPDDERYTHLVGTEIELP 255

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             G  I         +  RHV  E G+ +V+
Sbjct: 256 LTGRKIP-------VVADRHVDPEFGTGAVK 279


>gi|225026311|ref|ZP_03715503.1| hypothetical protein EUBHAL_00552 [Eubacterium hallii DSM 3353]
 gi|224956321|gb|EEG37530.1| hypothetical protein EUBHAL_00552 [Eubacterium hallii DSM 3353]
          Length = 483

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 68/407 (16%), Positives = 140/407 (34%), Gaps = 72/407 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A      G +        D G      AL + +R  + 
Sbjct: 9   APSPTGRMHVGNLRTALYTYLIA---KHEGGDFVLRIEDTDQGR-YCEEALGIIYRTLEK 64

Query: 189 --LYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
             L +++    +G + P V  + V   L   Y+ +L+   E  +        + ++ + +
Sbjct: 65  TGLKHDEGPDKDGGFGPYVQSERVASGLYMDYAKQLIEKGE-AYYCFCDQERLDSLKQNV 123

Query: 246 RDDLKALNIQHDIFIS----EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                ++  +H + +S    E +   G P  IR  + N       +   +    ++  ++
Sbjct: 124 GGKEISVYDKHCLHLSKEEVEANLAAGKPFVIRANMPNEGET--TFHDEIYGDITQPNEE 181

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDH 360
            D                 D  L+KSDG  TY  A++       +     + +V+ G+++
Sbjct: 182 LD-----------------DMILIKSDGYPTYNFANV------VDDHLMQITHVVRGNEY 218

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VG 418
                +   +  A   ++ +          L  +    K+SKR+G   +   ++++  V 
Sbjct: 219 LSSAPKYTRLYKAFGWEEPKYIHC-----PLITNEEHQKLSKRSGHS-SYEDLIEQGFVP 272

Query: 419 SDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-------CRSIFRQAK 469
              V F+ L  W        F   ++ E           Y +            +     
Sbjct: 273 EAVVNFVALLGWSSPDNREIFSLEELVEAFD--------YKHISKSPAVFDMVKLKWMNG 324

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
           +    +D D F     P   E    ++ L   +A         +P +
Sbjct: 325 EYLKAMDSDTFYNMAEPYIKEVIKKDMDL-KKIAALVKTRIEVFPEI 370


>gi|222152165|ref|YP_002561325.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121294|dbj|BAH18629.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 654

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 105/336 (31%), Gaps = 50/336 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      GY+V      ++ G +I   A +      + L  
Sbjct: 15  PSGKLHIGHAYSTVAGDAIARYKRMQGYDVKYLTGTDEHGQKIQEKAQAAGKSEIEYLDE 74

Query: 192 NDSDLPE-----GYYPGVYLKHVGKE---LADKYSSELLNFPE------EKWLPIVKD-- 235
             +D+             +++        + +K    LL   +      E W  +  +  
Sbjct: 75  IIADIQALWKKLDISNDDFIRTTEDRHKVVVEKIFERLLEQGDIYLGDYEGWYSVPDETF 134

Query: 236 YSVQAMMKIIRDDLKALN------IQHDIFISEDDFHRGDPSPIRDIIDNL--------- 280
           Y+   ++  I +  K +             + E+ +          +I+           
Sbjct: 135 YTETQLVDPIYEGEKIVGGKSPDSGHPVQLVKEESYFFKLSKYTDRLIEYYDAHPEFILP 194

Query: 281 -ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            +R+  +    + P               +   S           +  D    Y +A L 
Sbjct: 195 VSRKNEMLNNFIKPGLEDLAVSRTSFDWGIKVPSN----PKHVVYVWIDALTNYISA-LG 249

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVK---RLEAVAA---AVSEKKAQINVLLCELVRLYR 393
           Y     E  F+       +D     K   R   +      ++        +      L +
Sbjct: 250 YLSE-DETEFNKY---WPADVHIMAKEIVRFHTIIWPALLMALDLPLPKKIFAHGWILMK 305

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KMSK  G+ +    ++D  G D+VR+ ++  
Sbjct: 306 DG---KMSKSKGNVVDPHVLIDRYGLDAVRYYLMRE 338


>gi|213027311|ref|ZP_03341758.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 281

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|322374145|ref|ZP_08048679.1| glutamate--tRNA ligase [Streptococcus sp. C150]
 gi|321277111|gb|EFX54182.1| glutamate--tRNA ligase [Streptococcus sp. C150]
          Length = 484

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 127/393 (32%), Gaps = 88/393 (22%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q++ L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y K++ + LA+  + +     EE      +
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G V    L   
Sbjct: 119 QEAAGETPRYINEFLGMTEEEKAAYIAERE-----------------AAGIVPTVRLAVN 161

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 162 ESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR 216

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
             G DH     +   V  A+  +  +       +  +       K+SKR  + +      
Sbjct: 217 --GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIEDY 270

Query: 415 DEVG--------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            + G                           + ++     R +     FD  K+   S +
Sbjct: 271 RKKGYLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQKKLDWMSND 330

Query: 449 NPVFYVQYA-----YARCRSIFRQAKDIFPDLD 476
               Y++ A     +A C+    +A  +    +
Sbjct: 331 ----YIKNADFDKVFALCKPFLEKAGRLTDKAE 359


>gi|297569024|ref|YP_003690368.1| valyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924939|gb|ADH85749.1| valyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 917

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                   +    +   +       +I     N TG +HVGH     + D L       G
Sbjct: 30  EDRWYQNWLEHKNFRATMDESRPSFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQG 89

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V      + AG     +                               V ++LA K  
Sbjct: 90  YNVLWLPGTDHAGIATQNV-------------------------------VERQLAAK-G 117

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   +K++  V  +  ++  +II   LK L    D          G    +R +  
Sbjct: 118 VSRQELGRDKFIERVWQWKEESGGQIINQ-LKRLGCSCDWERERFTMDEGLSQAVRTVFV 176

Query: 279 NLARQGYVYEG 289
            L ++G +Y G
Sbjct: 177 RLYKEGLIYRG 187


>gi|241895048|ref|ZP_04782344.1| glutamyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871766|gb|EER75517.1| glutamyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 498

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 106/306 (34%), Gaps = 37/306 (12%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
            K+ + + + +PTG +H+G+ R A+     A       ++     + TR    +   +Q+
Sbjct: 7   KKIRVRY-APSPTGHLHIGNARTALFNWLFARHHKGEFIIRIEDTDQTR-NIADGEKSQL 64

Query: 175 NTLA-LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           + LA L + W    A         +     +Y K + ++L D+      +F   + L   
Sbjct: 65  DNLAWLGLDWDESPANPGKYGPYRQSERLSIY-KPLIQDLLDR-GLAYRSFKTSEELAAE 122

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++  V A              +   ++ E  +       I     +   +G  Y      
Sbjct: 123 REAQVAA-------------KEAPHYVYE--YADMSDEEIAAFQADAEAKGLPYVVRFRV 167

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+ K     D+ + ++   S+ VG   D  + K+DG  TY   + A     +     +++
Sbjct: 168 PEDKDYAWDDIVKGKISINSSTVG--GDWVIQKADGMPTY---NFAVVVDDHMMEISHVL 222

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              G DH     +   +  A   +      +   +  +       K+SKR    +     
Sbjct: 223 R--GDDHVSNTPKQLMIYEAFGWEAP----IFGHMTLIINGDTGKKLSKRDETVLQFIEQ 276

Query: 414 VDEVGS 419
              +G 
Sbjct: 277 YRSLGY 282


>gi|219681524|ref|YP_002467909.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682080|ref|YP_002468464.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471205|ref|ZP_05635204.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782372|sp|B8D8V0|SYI_BUCA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782373|sp|B8D754|SYI_BUCAT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219621813|gb|ACL29969.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624367|gb|ACL30522.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086464|gb|ADP66545.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087045|gb|ADP67125.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 18/156 (11%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           GSD   G+      ++  +SEKK    VL    V    DG   KMSK  G+ I+   +VD
Sbjct: 564 GSDQHRGWFMSSLIISTLISEKKPYSEVLTHGFVV---DGKGQKMSKSIGNTISPNEIVD 620

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G+D +R  +     S  +      +K  S           Y R R+  R       D 
Sbjct: 621 TLGADILRLWVASSNYSNDISISNEILKSSSDI---------YRRIRNTARFMLANISDF 671

Query: 476 DFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIE 510
           D     +N+I +E+     +  +    + +   +I+
Sbjct: 672 D---PKKNIISKENMVLLDKWAIGQTKIVQ-EEIIQ 703


>gi|148909178|gb|ABR17689.1| unknown [Picea sitchensis]
          Length = 581

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 112/344 (32%), Gaps = 48/344 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
           R    ++  +      + + K   V + F + +PTG +HVG  R A+     A       
Sbjct: 38  RARFVTLAANKAPGSDDSVAKSGGVRVRF-APSPTGNLHVGGARTALFNYLFARSRGGKF 96

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGK 211
           ++     ++ R              +  V  R    L  +  + P+ G   G Y +    
Sbjct: 97  ILRIEDTDLERS----------TKESEEVVLRDLAWLGLSWDEGPDKGGSFGPYRQSERN 146

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L  +Y+  LLN          + +     +  ++++   L     ++           S
Sbjct: 147 TLYKEYAERLLNSG-----YAYRCFCSNEELDKMKEE-AKLKQLPPVYTG------KWVS 194

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
              + I     +G  +      PK  T +  D+ R ++ +R   +GD     +++S+G  
Sbjct: 195 ATDEEIQEELLKGTPFTYRFRVPKEGTLKINDLIRGEVSWRLDTLGDF---VIMRSNGQP 251

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y   +          G  ++I     +H     R   +  A+              V L
Sbjct: 252 VY---NFCVAVDDASMGISHVIR--AEEHLPNTLRQALIYNALGFSMPSFAH-----VSL 301

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVG---SDSVRFMMLWRKNS 432
                  K+SKR G     +    E+G      V ++ L   N 
Sbjct: 302 ILAPDRSKLSKRHGATSVGQ--FREMGFLPEAMVNYLALLGWND 343


>gi|217076406|ref|YP_002334122.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226735065|sp|B7IFB7|SYC_THEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217036259|gb|ACJ74781.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 469

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 123/394 (31%), Gaps = 67/394 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R AVV D     + + GY+V                 +  F     
Sbjct: 29  CGPTVYNYIHIGNARPAVVFDAFRRFLEYRGYKVI---------------MVQNFTDIDD 73

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-----WLPIVKDYSVQAMM 242
            + N  ++       GV  K V      +Y  +  +                +  V A+ 
Sbjct: 74  KIINEANEW------GVDFKDVADTFIAEYWKDAQSLGIRAANFHPRTTDYVNEIVDAVE 127

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K+I           D++ S   F R      + I D ++        +   P      K 
Sbjct: 128 KLISKGYAYTVENGDVYFSVKKFERYGKLSGKKIEDLISGARVEVNTLKKDPLDFALWKA 187

Query: 303 DMDRKQLL---FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
               +      +     G  ++  ++           D+         G +++I+     
Sbjct: 188 VKPGEPSWDSPWGCGRPGWHIECSVM--SQKLLGDTFDIHA-------GGEDLIF----- 233

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              + +  ++ + A+   K      +   + + R     KMSK  G+   +R  V   G 
Sbjct: 234 --PHHEDEKSQSEAL-TGKPFARYWMHNGMIITRG---DKMSKSIGNVFLVREAVKRYGK 287

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP------ 473
           D+V+  +L +     ++F    + E  K         A  +      + ++ +P      
Sbjct: 288 DAVKLFLLSKHYRTPIEFSDEIMMENKK---------AALKVLKTLNRFEEKYPYPKVPK 338

Query: 474 --DLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504
             +   D+  + V   E +F+    + LI  L++
Sbjct: 339 RDEYMNDIEQKFVEALEDDFNTPKAIALIFDLSK 372


>gi|206603463|gb|EDZ39943.1| Isoleucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 976

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 23/199 (11%)

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           LA  K K +  +   +Y+ GSD   G+       + A+ +      VL    V    DG 
Sbjct: 556 LAVLKDKPDTHWPADLYLEGSDQHRGWFHSSLLTSMALFDTPPYRKVLTHGFVV---DGQ 612

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK   + I+   ++++ G++ +R         E +      +  Q  E        
Sbjct: 613 GRKMSKSLKNVISPLEIINKYGAEILRLWAASSDYQEDIRLS-ELILSQLVE-------- 663

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP---RVIENAT 513
           +Y + R+ FR       DL  D   +N+   E   D  +  +   L+ +      I  A 
Sbjct: 664 SYRKIRNTFRFVVSNLSDLPEDEARQNIWVPEQSPDILDQWI---LSLWETTKEKIVQAY 720

Query: 514 IAQEPYKLAFYLYDLASVF 532
            A E  +++     LA  F
Sbjct: 721 NAFEFSRISQ----LAGQF 735


>gi|145589133|ref|YP_001155730.1| glutamyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|187645687|sp|A4SXF2|SYE_POLSQ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|145047539|gb|ABP34166.1| glutamyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 468

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 95/293 (32%), Gaps = 69/293 (23%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A                                +    
Sbjct: 11  APSPTGFIHLGNLRSALYPWAFAR-----------------------------HNKGDFI 41

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   D+DL       V +   G           L    ++  PI +   +     +I++ 
Sbjct: 42  LRIEDTDLERSSQEAVDVIIEGM--------AWLGMDIDEG-PIYQMQRIDRYRAVIKEM 92

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-----------VYEGILPP---- 293
           ++A  + +  ++SED+ ++     + +  +     G            + EG+LP     
Sbjct: 93  VEA-GLAYPCYMSEDELNKLRDQQMANK-EKPRYNGLWRPEPGKDLPPIPEGVLPVIRFK 150

Query: 294 -PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P   +    D  + Q+   +  +    D  + + DG+ TY   +        +    ++
Sbjct: 151 NPIGGSVIWNDAVKGQIEISNDELD---DLVIARPDGTPTY---NFCVVVDDLDMKITHV 204

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           I   G DH     R   +  A+          +   +    + +  KMSKR G
Sbjct: 205 IR--GDDHVNNTPRQINIMKALGGSPP-----VYAHLPTVLNDLGEKMSKRNG 250


>gi|332708902|ref|ZP_08428873.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352444|gb|EGJ32013.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 494

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 60/319 (18%), Positives = 112/319 (35%), Gaps = 41/319 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +V DT    + + GY+V    Y+ +    I+   L+   R   ++       
Sbjct: 38  HLGHARTCIVWDTARHYLQWRGYDV---NYVQNF-TDIDDKILNRARREGTSMEAVSERF 93

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            + Y+    +  +  + A+ Y     +         +K    +   K       A     
Sbjct: 94  IDAYF--EDMARLNVQEANAYPRATHSLDG------IKRLVCELEQKGY-----AYEADG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ S   F        R  +++L        G +    S   +K D     +   +   
Sbjct: 141 DVYYSVRRFEEYGKLSGRK-LEDLQAGA---SGRVDVADSVGPKKKDPFDFAVWKSAKPE 196

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAV- 370
               + P     G   +     A  +       D  I+  GSD     H   + + EAV 
Sbjct: 197 EPSWESPW--GPGRPGWHIECSAMVRDMLGETID--IHTGGSDLVFPHHENEIAQSEAVT 252

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWR 429
             +++        L   +V++  DG   KMSK  G+F T+R ++D  V   +VR  +L  
Sbjct: 253 GKSLARYW-----LHNGMVKV--DGE--KMSKSLGNFTTIRDLLDRPVDPMAVRLFVLMA 303

Query: 430 KNSELLDFDFCKVKEQSKE 448
           +  + +DF    +   +  
Sbjct: 304 QYRKPIDFTDDAIASATNG 322


>gi|260584451|ref|ZP_05852198.1| glutamate--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157969|gb|EEW93038.1| glutamate--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 492

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 34/295 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A                   G +   + +    R +  
Sbjct: 10  APSPTGHLHIGNARTALFNYLFAR----------------HYGGEF-IIRIEDTDRKRNI 52

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIR 246
            +  +S L    + G+     G +          +  E  + P+++    +  A    + 
Sbjct: 53  AHGEESQLENLTWLGID-WDEGPDKPKNVGPYRQSEREHIYNPLIEQLIAEDKAYKCYMT 111

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +      E   + G  + + ++  D    +G         P+++T    D+ 
Sbjct: 112 EEELEAEREAQRANGEMPHYSGQHAHLTQEQRDAFEAEGRTPVVRFRVPQNRTYTFDDIV 171

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           + ++ F S  VG D    +LK DG  TY       F    +  F  + +V+ G DH    
Sbjct: 172 KGEITFESGSVGGDF--VILKRDGMPTYN------FAVAVDDHFMEITHVLRGDDHIANT 223

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   V  A      +       +  +       K+SKR    +       ++G 
Sbjct: 224 PKQMMVYEAFGWDTPRFGH----MTLIINTETGKKLSKRDESILQFIEQYKDLGY 274


>gi|94989852|ref|YP_597952.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94543360|gb|ABF33408.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 666

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 109/339 (32%), Gaps = 57/339 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A     + Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGIKPQTYVDN 74

Query: 192 NDSDLPE----------------GYYPGVYLKHVGKELA-------DKYSSELLNFPEE- 227
              D+                    Y    +  V ++L        D+YS       EE 
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLDEYSGWYSVSDEEF 134

Query: 228 ----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
               +   + +D   Q +  I      A +     ++SE+ +          ++     +
Sbjct: 135 FTESQLKEVFRDEDGQVIGGI------APSGHEVEWVSEESYFLRLSKYADRLVAFFKER 188

Query: 284 GYVYE------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
               +       ++        +   + R    +   +  D      +  D    Y  A 
Sbjct: 189 PDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA- 247

Query: 338 LAYFKCKYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELV 389
           L Y        FD         ++G D    + R  ++      +       + L+    
Sbjct: 248 LGY-GQANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            + +DG   KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 303 FVMKDG---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|15616769|ref|NP_239981.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134943|sp|P57249|SYI_BUCAI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25293003|pir||C84947 isoleucine-tRNA ligase (EC 6.1.1.5) [imported] - Buchnera sp.
           (strain APS)
 gi|10038832|dbj|BAB12867.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 18/156 (11%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           GSD   G+      ++  +SEKK    VL    V    DG   KMSK  G+ I+   +VD
Sbjct: 564 GSDQHRGWFMSSLIISTLISEKKPYSEVLTHGFVV---DGKGQKMSKSIGNTISPNEIVD 620

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G+D +R  +     S  +      +K  S           Y R R+  R       D 
Sbjct: 621 TLGADILRLWVASSNYSNDISISNEILKSSSDI---------YRRIRNTARFMLANISDF 671

Query: 476 DFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIE 510
           D     +N+I +E+     +  +    + +   +I+
Sbjct: 672 D---PKKNIISKENMVLLDKWAIGQTKIVQ-EEIIQ 703


>gi|312884628|ref|ZP_07744331.1| valyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367720|gb|EFP95269.1| valyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 952

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQAWEEKGYFKPHGDTSKQAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            +    G     +   + AG     +                               V +
Sbjct: 64  RVERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEEKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|291515873|emb|CBK65083.1| Isoleucyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 1131

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A+ + +  A  N++   LV    D    KMSKR G+ +    V+D
Sbjct: 637 GVDQTRGWFFTLHAIASMLFDSMAFKNIISNGLV---LDKNGNKMSKRLGNAVDPFEVLD 693

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             G+D+ R+ M+      + L FD   V E  ++          F+  YA
Sbjct: 694 TYGADATRWYMISNSQPWDNLKFDRDGVDEVRRKFFGTLYNTYSFFALYA 743


>gi|293401250|ref|ZP_06645394.1| glutamate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305376|gb|EFE46621.1| glutamate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 107/348 (30%), Gaps = 70/348 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MH+G+ R A+          GD +  +               D    +     
Sbjct: 9   APSPTGYMHIGNLRTALFEYLIAKHEDGDFILRIEDT------------DQERLVEGAVD 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            ++   ++    +D     G   G Y++     +  KY+ EL++     +      +  +
Sbjct: 57  IIYDTLKEVGLTHDEGPDVGGDFGPYVQSERLPMYKKYADELVDLGGAHYC-----FCGE 111

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R + ++L I            + D       ++    +    E  +     K +
Sbjct: 112 EEIEKQRKEAESLGISF----------KYDDPCKHISVEEARERIANGEKYVVRQTIKHS 161

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            +   D +             +  LLKSDG  TY  A++      ++ G  ++  V G++
Sbjct: 162 GETYFDDEVYGRIEVDNSILDESVLLKSDGYPTYNFANI---IDDHQMGITHV--VRGNE 216

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------- 411
           +     +   +  +         +     V         K+SKR GD             
Sbjct: 217 YLSSTPKYNLIYQSYGWD-----IPTYVHVPPVMKDEQHKLSKRNGDASFQDLVKKGYLP 271

Query: 412 --------------HVVDEVG--SDSVRFMMLWRKNSELLDFDFCKVK 443
                             E+    + ++   + R +     FD  K+ 
Sbjct: 272 QAILNYIALLGWSPETEQEIYTLEELIKVFDIKRISKSPAIFDIDKLT 319


>gi|168489130|ref|ZP_02713329.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168494176|ref|ZP_02718319.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221232783|ref|YP_002511937.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855558|ref|YP_002737070.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|183572277|gb|EDT92805.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183575969|gb|EDT96497.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220675245|emb|CAR69835.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722242|gb|ACO18095.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|332071339|gb|EGI81833.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332071504|gb|EGI81997.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332198675|gb|EGJ12757.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|149023764|ref|ZP_01836225.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|225861888|ref|YP_002743397.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230270|ref|ZP_06963951.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254020|ref|ZP_06977606.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501569|ref|YP_003723509.1| glutamate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|147929560|gb|EDK80553.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|225727942|gb|ACO23793.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237164|gb|ADI68295.1| glutamate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|301795001|emb|CBW37465.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|327388806|gb|EGE87154.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332198883|gb|EGJ12964.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|94310030|ref|YP_583240.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353882|gb|ABF07971.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 491

 Score = 46.4 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 108/357 (30%), Gaps = 94/357 (26%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           IE G+  +        ++         HVGH R  VV D +   +  +GY+VT       
Sbjct: 49  IEPGKVRMYVCGMTVYDYC--------HVGHARVMVVFDMVHRWLRAAGYDVT------- 93

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
                          Y Q + + D            +     E  +        F     
Sbjct: 94  ---------------YVQNITDID----------DKIIRRAAENGETIGQLTTRF----- 123

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                       ++ + +D  AL +    +      +      + +II+ L  +G  Y+ 
Sbjct: 124 ------------IQYMHEDATALGVIRPDYEPRATEY---VPQMLNIIEKLEAKGLAYQA 168

Query: 290 ILPPP-----------KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS----------- 327
                           K       D+   + +  +    D +D  L KS           
Sbjct: 169 TDGDVNYSVRKFPGYGKLSGKSLEDLRAGERVNANDAKQDPLDFVLWKSAKATEPPESKW 228

Query: 328 -----DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQI 381
                 G   +     A         FD  I+  G+D    + +   A +   S +   +
Sbjct: 229 DSKWGSGRPGWHIECSAMSCTLLGEHFD--IHGGGADLQFPHHENEIAQSEGASGRP-FV 285

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           N+ +        D    KMSK  G+F T+R V+ E  ++ VRF +L       L++ 
Sbjct: 286 NMWMHNGFVRVND---EKMSKSLGNFFTIRDVLKEYDAEVVRFFILRAHYRSPLNYS 339


>gi|282896893|ref|ZP_06304899.1| Arginyl tRNA synthetase anticodon binding [Raphidiopsis brookii D9]
 gi|281198302|gb|EFA73192.1| Arginyl tRNA synthetase anticodon binding [Raphidiopsis brookii D9]
          Length = 239

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 32/152 (21%)

Query: 451 VFYVQYAYARCRSIF----RQAKDIFPDLDFDLFPRNVIPQESEFD---------TSELQ 497
           +F +Q+AY+RC S+     R+      + D D  P   +      D           E+ 
Sbjct: 95  IFAIQHAYSRCVSLISLAKREGWIKIVENDTDSQPLLSVSSIPWLDDCQKLRFYQPDEIH 154

Query: 498 LIVHLAEYPRVIENATIAQE-PYK---LAFYL---YDLASVFHGHWSHGRENPRLRFVQA 550
           LI  L                P+    +  +L     L+S F   WS     P   +V+ 
Sbjct: 155 LIHLLVR-------TVDDLAFPHIQRSI-NWLAVAEKLSSAFEKFWSSC---PIWGYVKI 203

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNI-IGVES 581
           ++ +L   R+ ++     +I   L + +GV +
Sbjct: 204 HDLELAKARIGMLILTQLVIKYILEVKLGVTA 235


>gi|256843734|ref|ZP_05549222.1| leucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256615154|gb|EEU20355.1| leucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 804

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 68/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++  L      Y   ++  T   
Sbjct: 648 ENDGTLDKV---YAETVKKVTEDF 668


>gi|225869985|ref|YP_002745932.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699389|emb|CAW92834.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 667

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 107/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A       Q  +  
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMLGYDVFYLTGLDEHGQKIQDKAQEAGLSPQAYVDG 75

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              ++             +++      +E+       LL   +        W  +  +++
Sbjct: 76  MAEEVKALWKLLDISYDKFIRTTGDYHEEVVAAVFERLLAQDDIYLGTYSGWYSVSDEEF 135

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +  +  D     I           ++SE+ +          ++     Q    + 
Sbjct: 136 FTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYADRLVAFFKAQPDFIQP 195

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y   
Sbjct: 196 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYATA-LGY-GQ 253

Query: 344 KYERGFDN-----MIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
           K    FD      + +++G D    + R  ++      +         L+     + +DG
Sbjct: 254 KDHANFDKFWSGRVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 309

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 310 ---KMSKSKGNVIYPEMLVERFGLDPLRYYLMR 339


>gi|46579145|ref|YP_009953.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81405042|sp|Q72E47|SYV_DESVH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46448558|gb|AAS95212.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232983|gb|ADP85837.1| valyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 884

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 104/348 (29%), Gaps = 46/348 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +           +  ++   G   +I     N TG +H+GH    V+ D L       G
Sbjct: 16  EERWRRHWEDNRTFTPDMDAPGEPYSIVIPPPNVTGALHIGHALNHVLIDVLCRNARQQG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V      + AG  I T  +      ++ L  +D                  +  ++Y 
Sbjct: 76  KKVLWLPGTDHAG--IATQNVVERALAKEGLSRHD-------LGREAFIERVWQWKEEYG 126

Query: 219 SELLNF---------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           + +LN             +    + +   +A+ K+  D      I    +I  +  +R  
Sbjct: 127 NRILNQIRMLGDSVDWTRERF-TMDEGLSKAVRKVFVDLYNGGYIYRGNYII-NWCNRCH 184

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----------GDD 319
            +   D +D++  QG++Y           +      R + +   T V          G  
Sbjct: 185 TALADDEVDHMPEQGHLYHVRYDFEDGSGSVVIATTRPETIMADTGVCVHPEDERYAGLI 244

Query: 320 VDRPLLKSDGSY------TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
             + L+   G        TY   +      K     D   + +G  H     +       
Sbjct: 245 GKKILVPVIGRAVPLFADTYVDREFGTGALKVTPCHDPNDWTLGERHGLAFIQCI----- 299

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMS---KRAGDFITLRHVVDEVG 418
             ++   +         L ++    ++    + +G  + +  +   VG
Sbjct: 300 --DEDGNMTAEAGPYAGLTKEECRKRIVADLEASGQLVRVEELNHSVG 345



 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 335 AADLAYFKCK--YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DLA F        GFD +++         V R+  +     ++    +V L  LV   
Sbjct: 470 TKDLATFYPTSVLVTGFD-ILFFW-------VARMMMLGMHFMDEVPFKHVYLHALV--- 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           RDG   KMSK  G+ I    ++D+ G+DS+RF +
Sbjct: 519 RDGEGRKMSKSTGNVIDPLAMIDKYGTDSLRFTL 552


>gi|156935601|ref|YP_001439517.1| valyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533855|gb|ABU78681.1| hypothetical protein ESA_03466 [Cronobacter sakazakii ATCC BAA-894]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|257095660|ref|YP_003169301.1| valyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048184|gb|ACV37372.1| valyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 942

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 53/211 (25%), Gaps = 37/211 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R+        G         K     I     N TG +H+GH     + D L       G
Sbjct: 17  RRWYPEWEARGYFNAGLDTEKSAAFCILLPPPNVTGTLHMGHGFNQAIMDALTRYHRMRG 76

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                +   + AG   QI                                  V +   D 
Sbjct: 77  DNTLWQPGTDHAGIATQI----------------------------------VVERQLDA 102

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 +   EK+L  V ++   +   I R  ++ L    D          G    +   
Sbjct: 103 QGVSRHDLGREKFLEKVWEWKEFSGSTITRQ-MRRLGTSPDWRRERFTMDAGLSKTVTQT 161

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              L R+G +Y G          Q    D +
Sbjct: 162 FVRLYREGLIYRGKRLVNWDPVLQTAVSDLE 192


>gi|187924775|ref|YP_001896417.1| valyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187715969|gb|ACD17193.1| valyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 959

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ S+    +                 +       +I+    N TG +H+GH     + 
Sbjct: 11  TLAKSFEPHTIEAHWGPEWEKRAYATPVIDENRKDFSIQLPPPNVTGTLHMGHAFNQTIM 70

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 71  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I + ++ L    D          
Sbjct: 99  IVVERQLDAQGVSRHDLGREKFVERVWEWKQESG-STITNQVRRLGASIDWSREYFTMDD 157

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 158 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGSLW 208


>gi|156935583|ref|YP_001439499.1| valyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533837|gb|ABU78663.1| hypothetical protein ESA_03447 [Cronobacter sakazakii ATCC BAA-894]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 73/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|313889850|ref|ZP_07823492.1| glutamate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121895|gb|EFR44992.1| glutamate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 481

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 91/284 (32%), Gaps = 25/284 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G          D    +            + 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYAR---HHGGTFIIRIEDTDRKRHVAD-GERSQLENLKW 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  +  + PE +    Y +    EL  KY   LL         +     V         +
Sbjct: 66  LGIDWDESPETH--ANYRQSERLELYQKYIDILLEKG------LAYKSYVTEEELAAERE 117

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +    +   +I+E      +   +  I D    QG +    L   +S   +  DM +  
Sbjct: 118 RQEAAGETPRYINEF-IGMSEEEKLAYIADR-EAQGIIPTVRLKVNESGIYKWTDMVKGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F    +G   D  + K DG  TY   + A     ++    ++I   G DH     +  
Sbjct: 176 IEFEGANIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GDDHIANTPKQL 228

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V  A+  +      +   +  +       K+SKR  D +    
Sbjct: 229 MVYEALGWEAP----VFGHMTLIINAETGKKLSKRDTDTLQFIE 268


>gi|302335806|ref|YP_003801013.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319646|gb|ADK68133.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 854

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 94  SPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +      +    G+        K  +  +E     P+G +H+GH R   +GD +A 
Sbjct: 15  DAEAIETKWQRVWEDEGLYKTDEDPAKPKRYVLEMF-PYPSGDLHMGHARNYTIGDAMAR 73

Query: 153 LMAFSGYEV 161
                G++V
Sbjct: 74  QARMRGFDV 82


>gi|261855975|ref|YP_003263258.1| valyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836444|gb|ACX96211.1| valyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 952

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 72/273 (26%), Gaps = 46/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
             +P+ +     +   +G  +    +L        I     N TG +H+GH     + D 
Sbjct: 4   TYNPAEIEAPCYARWQAGGYFSPDASLPADAPNYCIMLPPPNVTGRLHMGHAFQDTLMDM 63

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +    G     +   + AG     +                                
Sbjct: 64  LTRVHRMQGERTLWQPGTDHAGIATQMVV------------------------------- 92

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +   +       +   E +   V  +  ++    I + +K L    D          G 
Sbjct: 93  -ERQLEAEGKTRHDLGREAFTERVWQWKSESG-GFITEQMKRLGASCDWSRERFTMDDGL 150

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +R++   L   G +Y G               D + +    T     +  PL  +DG
Sbjct: 151 SDAVREVFVRLFEDGLIYRGKRLVNWDPVLHTAVSDLEVISEEETGHLWHLRYPL--TDG 208

Query: 330 SYTYFAA---------DLAYFKCKYERGFDNMI 353
                 A         D A      +  + ++I
Sbjct: 209 GGHLIVATTRPETMLGDTAVAVHPEDERYKHLI 241


>gi|194397703|ref|YP_002038659.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690806|sp|B5E378|SYE_STRP4 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|194357370|gb|ACF55818.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|148992089|ref|ZP_01821863.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147929138|gb|EDK80149.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE Y    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESY--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWIIQKKDGYPTY---NFAVAIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|15901888|ref|NP_346492.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657115|ref|ZP_01407902.1| hypothetical protein SpneT_02001662 [Streptococcus pneumoniae
           TIGR4]
 gi|148998140|ref|ZP_01825653.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168577101|ref|ZP_02722921.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068683|ref|YP_003877649.1| glutamyl- and glutaminyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|30173202|sp|Q97NG1|SYE_STRPN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|14973580|gb|AAK76132.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756150|gb|EDK63193.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577271|gb|EDT97799.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306410220|gb|ADM85647.1| Glutamyl- and glutaminyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|283834893|ref|ZP_06354634.1| valine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291069152|gb|EFE07261.1| valine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|259501900|ref|ZP_05744802.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170077|gb|EEW54572.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 674

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 104/343 (30%), Gaps = 66/343 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    V  D  A     SGY+V      ++ G +I         +    L  
Sbjct: 17  PSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIE--------QKADKLGM 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELA---DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +  +    G  +K + + L    DK+     ++ E     I + +  Q    I + +
Sbjct: 69  QPQEYVDQMAAG--IKQLWQTLKITNDKFIRTTDDYHERAVQKIFQKFLDQG--DIYKGE 124

Query: 249 LKALN-IQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                 +  + + +E      +R D   +          G    G       + +    M
Sbjct: 125 YTGWYSVDDEEYFTESQLAEVYRDDNGKVIG--------GKAPSGHEVQLVKEESYFFKM 176

Query: 305 DRKQLLF-----RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMI 353
            +                +   R     +        DLA  +  +  G        +++
Sbjct: 177 SKYADWLMKYYQDHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPQHVV 236

Query: 354 YVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----- 394
           YV                +D S + K   A    V ++  + + +   ++          
Sbjct: 237 YVWIDALSNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPK 296

Query: 395 ---------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                        KMSK  G+ I    +VD  G D+ R+ +L 
Sbjct: 297 HVIGHGWLTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLR 339


>gi|237729195|ref|ZP_04559676.1| valyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908924|gb|EEH94842.1| valyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|134046374|ref|YP_001097859.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|187647746|sp|A4FZL1|SYM_METM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|132663999|gb|ABO35645.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 663

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 107/367 (29%), Gaps = 57/367 (15%)

Query: 133 TGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
            GP+H+GH R   +  D     +   G EV      ++ G  I   A       + +  R
Sbjct: 13  NGPLHLGHARSTYIPADIYTRYLRLKGEEVIHVGGTDNHGVPITLTAEREGVKPIDIVDR 72

Query: 185 YQQALYNND--------------------------SDLPEGYYPGVYLKHVGKELADKYS 218
           Y  A+  +                           S L E  Y  +Y K + +   +K  
Sbjct: 73  YHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGY--IYEKEIEQFYCEKCD 130

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF--------ISEDDFHRGDP 270
             L +   E   P  +  +     ++    L+   + +           I     +    
Sbjct: 131 MYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKRTTHYFFKL 190

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQ---KCDMDRKQLLFRSTMVGDDVDR-PLLK 326
           S ++D++             +     +  +     D+ R           DD      ++
Sbjct: 191 SAMQDVLKEYIENSPEMPEHVKNMALRWIEELHDWDVSRNIKWGVPIPGCDDQVMYVWIE 250

Query: 327 SDGSYTYFAADLAYF---KCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQIN 382
           +   Y  F   L            G   + + +G D + +       +   +   K    
Sbjct: 251 APIGYVSFTKQLGDLWKDYWLENTGDSKISHFIGKDITVHHAVFWPGILKGIGGYKMPNA 310

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
           V+    + L       KMS      + ++  ++   SD +R+  +     +   DF +  
Sbjct: 311 VVSGGYLTL----ENKKMSTSKNWVVWVKDFIENFSSDYLRYFFMINAPLNRDTDFSWDD 366

Query: 442 VKEQSKE 448
            +++   
Sbjct: 367 FQKRINT 373


>gi|156740103|ref|YP_001430232.1| leucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083141|sp|A7NFJ2|SYL_ROSCS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156231431|gb|ABU56214.1| leucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 904

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+   K        GI       G   +  +E     P+G +H+GH +  V+GD L 
Sbjct: 12  RFDPAIEPKWREFWEREGIFKAGRRAGAPRRYILEMF-PYPSGDLHIGHLKNYVIGDALT 70

Query: 152 SLMAFSGYEV 161
                 GY+V
Sbjct: 71  RYYVIRGYDV 80


>gi|160878187|ref|YP_001557155.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160426853|gb|ABX40416.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 664

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 1/80 (1%)

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENP 450
            +DG  +KMSK  G+ +    +V+  G D+VR+ +L           ++  + ++   + 
Sbjct: 301 AKDGSGVKMSKSRGNVLYADDLVEFFGVDAVRYFVLHEMPFDNDGVINWELMVDRMNSDL 360

Query: 451 VFYVQYAYARCRSIFRQAKD 470
              +     R  S+  +  +
Sbjct: 361 ANTLGNLVNRTISMSNKYFE 380


>gi|83593131|ref|YP_426883.1| valyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83576045|gb|ABC22596.1| Valyl-tRNA synthetase, class Ia [Rhodospirillum rubrum ATCC 11170]
          Length = 879

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 31/248 (12%)

Query: 187 QALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           + + +N    P G   GV ++          A K + E +   EE     V  +      
Sbjct: 333 EKIEDNPMTQPYGDRSGVIIEPWLTDQWFVDAAKLAVEPIRAVEEGRTRFVPKHWENTFF 392

Query: 243 KIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           + +R+ ++   I   I+        +       + +  D      + + G+       T 
Sbjct: 393 EWMRN-IQPWCISRQIWWGHQVPAWYGPDGTIFVEETEDEARTAAHDHYGVATELTRDTD 451

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                    L   ST+   D    L +      Y+  D+         GFD +I+   + 
Sbjct: 452 VLDTWFSSALWPFSTLGWPDQTPELAR------YYPGDV------LVTGFD-IIFFWVAR 498

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +     V   V  +   I+        L RD    KMSK  G+ I    + D+ G+
Sbjct: 499 ---MMMMGHYVMGDVPFRDVYIH-------ALVRDEKGQKMSKSKGNVIDPLDMTDQYGT 548

Query: 420 DSVRFMML 427
           D++RF ++
Sbjct: 549 DALRFTLI 556


>gi|49474218|ref|YP_032260.1| methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|49239722|emb|CAF26101.1| Methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 519

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 102/325 (31%), Gaps = 35/325 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    H+GH   A+  D LA      G  V      ++ G ++   A ++    +Q    
Sbjct: 14  PNSTPHIGHAYSAIASDALARFQRLDGKNVFFLSGTDEHGLKMQQTATALGMTPKQLADR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           N +   +           +++   +               +  + +       ++ +   
Sbjct: 74  NSAVFKKMLAALNCSNDDFIRTTEERHYQACQEIWKKMQADGDIYLGCYKGWYSVRQEAY 133

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQG-----YVYEG 289
            + K   +  D             +  E+ +        + ++++  +            
Sbjct: 134 YEEKETEVGEDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEKHPDFIAPLERYN 193

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK-CKYERG 348
            +        +   + R    +   + G+      +  D    Y +A + +F     +R 
Sbjct: 194 EVISFVKSGLKDISISRASFHWGICVPGNPKHVMYVWVDALTNYLSA-IGFFDGNSKKRD 252

Query: 349 F-DNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           F    I+++G D    + R  AV   A  +S   A    +      L R     KMSK  
Sbjct: 253 FWPANIHIIGKD----IIRFHAVYWPAFLMSAGIALPKRVFAHGFLLNRG---AKMSKSI 305

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +    ++D  G D VR+ +L  
Sbjct: 306 GNVVDPFEMIDHYGLDQVRYFLLRE 330


>gi|332535158|ref|ZP_08410967.1| valyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035428|gb|EGI71927.1| valyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 62/216 (28%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +     G+G   +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQSLYQDWEQKGYF--KPSGQGVPYSIMIPPPNVTGSLHMGHAFQDTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 62  RFKRMQGNNTLWQVGTDHAGIATQML-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   E ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 91  KLHAEEGKTRHDLGREDFINKIWEWKKESGGTITKQ-LRRLGASVDWDRERFTMDDGLSE 149

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G               D +
Sbjct: 150 AVKEVFVRLHKENLIYRGKRLVNWDPKLHTAISDLE 185


>gi|317182405|dbj|BAJ60189.1| valyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 872

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 98/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLDQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIH---RAIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|291563999|emb|CBL42815.1| glutamyl-tRNA synthetase, bacterial family [butyrate-producing
           bacterium SS3/4]
          Length = 485

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 114/300 (38%), Gaps = 52/300 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E ++           +
Sbjct: 9   APSPTGRMHVGNLRTALYTYLIAKHEGGDFILRI-----EDTDQERHVE------GAEGI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G Y G Y++   ++  +  +Y+ +L+   E  +        
Sbjct: 58  IYRTLAKTGLIHDEGPDKDGGY-GPYVQSERQKAGIYMEYAKKLVEKGE-AYYCFCTQER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + ++ K +  +   +  +H + ++            ++ ++   + G  +      PK  
Sbjct: 116 LNSLKKTVNGEEIMVYDKHCLHLT------------KEEVEANLKAGKPFVIRQNNPKEG 163

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
           TT   D     +   +  +    D  L+KSDG  TY  A++       +     + +V+ 
Sbjct: 164 TTTFHDEIYGDITVDNAELD---DMVLIKSDGYPTYNFANV------VDDHLMKITHVVR 214

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+++     +   +  A   K      + C  +    +    K+SKR+G   +   ++++
Sbjct: 215 GNEYLSSSPKYNRLYDAFGWKVP--VYVHCPTIT---NEEHKKLSKRSGHS-SFEDLLEQ 268


>gi|296106307|ref|YP_003618007.1| valyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648208|gb|ADG24055.1| valyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 921

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 68/237 (28%), Gaps = 35/237 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + K L     S   +     G+  +  I     N TG +H+GH     + D L 
Sbjct: 4   TYSPEAIEKALYKKWES--HHYFQPRGESKRFCIMLPPPNVTGSLHMGHGFQHTIMDALT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +   +   + AG         V  R  +A              G+  K    
Sbjct: 62  RYHRMLGDKTLWQPGTDHAG----ISTQLVVERQLEA-------------QGISRKD--- 101

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E++L  V  +  ++    I   ++ L    D          G  +
Sbjct: 102 ------------LTREQFLDKVWQWKEESG-NTITQQMRRLGASVDWSRERFTMDEGLSA 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            ++ +   L  +G +Y G               D + L          +  P++ S+
Sbjct: 149 AVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSE 205


>gi|288931973|ref|YP_003436033.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894221|gb|ADC65758.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 1023

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 71/185 (38%), Gaps = 24/185 (12%)

Query: 357 GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D   G+   +L A   A  +   +  ++    +    D    KMSK  G+ +    V+
Sbjct: 547 GHDQTRGWFYSQLGASIIAFGKAPYKTVLMHGFTL----DEQGRKMSKSLGNVVEPEEVI 602

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--YVQYAYARCRSIFRQAKDIF 472
           D +G D+ R  +L     E L F + + +   +   +F   V++AY              
Sbjct: 603 DRIGVDAFRLYVLSSALWEDLKFSWGEAENFLRLLNIFWNAVRFAYTY------------ 650

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
             ++ D F R V P++ E    +  ++  L  + ++   A      +++    YD +   
Sbjct: 651 --MELDKF-REVSPEDCELRIEDKWILSRLESFCKLANEAMENYNLHRVVKRFYDFVVED 707

Query: 532 FHGHW 536
           F   +
Sbjct: 708 FSRWY 712


>gi|227892921|ref|ZP_04010726.1| leucine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865259|gb|EEJ72680.1| leucine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 804

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 44/204 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K    +D +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYYLRYVDPHNNKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         RLY  G+      KMSK  G+ +    V+DE G+DS+R + M      
Sbjct: 553 PTK-----EPFQRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLD 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D           P               ++  D    L  +      IPQE   D
Sbjct: 608 ASIDWD--------DNGPAST------------KKFLDRVWRLFVNDLDLKAIPQERIVD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
            ++ +L      Y   ++  T   
Sbjct: 648 KNDGELDKV---YAETVKKVTEDF 668


>gi|153005579|ref|YP_001379904.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029152|gb|ABS26920.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 838

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  S    +G            +  +E     P+G MH+GH R   +GD LA  +   G+
Sbjct: 15  RWQSRWEEAGAFRAGRRPDAEKRYVLEMF-PYPSGAMHMGHARVYTIGDALARHLRMRGH 73

Query: 160 EV 161
           +V
Sbjct: 74  DV 75



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G +H+     Y +    V   +    +      L+ + +    DG   KMSKR G+
Sbjct: 543 VYVGGPEHAVMHLLYFRFWHRVMHRLGLVREDEPCKRLVTQGIVNGPDGR--KMSKRWGN 600

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    +V   G+D+VR  ML+    E  D D+  
Sbjct: 601 VVAPGPMVARFGADTVRLFMLFAAPPEK-DIDWSD 634


>gi|108761325|ref|YP_632907.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465205|gb|ABF90390.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 831

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           IYV G +H+     Y +    V   +        +  L+ + +    DG   KMSKR G+
Sbjct: 541 IYVGGPEHAVMHLLYFRFWTRVMKLLGLSPVDEPVKRLITQGIVNGPDGR--KMSKRWGN 598

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    +V + G+D+ R  +L+    E  DFD+  
Sbjct: 599 VVAPASIVQKYGADTARAYVLFAGPPER-DFDWSD 632



 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 90  NLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N    P  +     +     GI    +  G   K  +E +   P+G MH+GH R  ++GD
Sbjct: 2   NERYEPQAIEGKWQTRWDDAGIFRAGSRPGAPKKYVLEML-PYPSGKMHMGHVRNYLLGD 60

Query: 149 TLASLMAFSGYEV 161
             A      G++V
Sbjct: 61  VYARYFRMKGFDV 73


>gi|107022514|ref|YP_620841.1| valyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116689463|ref|YP_835086.1| valyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|105892703|gb|ABF75868.1| valyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116647552|gb|ABK08193.1| valyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 955

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 79/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPSRPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLMTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYVHLI 244


>gi|289449837|ref|YP_003474971.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184384|gb|ADC90809.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 885

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P    + + +   +   +   +  +     I     N TG +H+GH     + D +   
Sbjct: 14  NPQEADRRIYADWENNGYFRAVIDAERQPFTIVMPPPNITGQLHLGHALNNTMQDIIIRY 73

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +  +A+        +             + 
Sbjct: 74  KRMQGYAAC-------WMPGTDHASIATEAKIVEAMAKEGISKAD--LSREQFLERAWQW 124

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y   ++N                         L+ L +  D          G  + +
Sbjct: 125 KKEYGGCIVNQ------------------------LRRLGVSCDWERERFTMDDGMSAAV 160

Query: 274 RDIIDNLARQGYVYEG 289
             +  NL  +G +Y G
Sbjct: 161 NRVFVNLYNKGLIYRG 176


>gi|225387105|ref|ZP_03756869.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme
           DSM 15981]
 gi|225046791|gb|EEG57037.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme
           DSM 15981]
          Length = 660

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 69/491 (14%), Positives = 145/491 (29%), Gaps = 86/491 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      G +V  +   ++ G +I   A + 
Sbjct: 12  TTAIAYASGKP----HIGNTYEIVLADSIARYKRAQGCDVFFQTGTDEHGQKIEEKAQAA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+        E +   I K    Q  
Sbjct: 68  GVSPKEFVDKAAEEIK-------RIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYDQG- 119

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I +   + +     + F +E     G        +     + Y +      PK     
Sbjct: 120 -DIYKGYYEGMYCTPCESFFTESQLVDGKCPDCGREVKPAKEEAYFFRMSKYAPKLIEHI 178

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
               +  Q + R   + ++   P             DL   +  +  G    FD  ++ Y
Sbjct: 179 NAHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTTFSWGIPVTFDPKHVTY 228

Query: 355 VM---------------GSDHSGYVKRLE-AVAAAVSEKKAQIN------VLLCELVRLY 392
           V                    +   K+   A    + +   + +       L+   V L 
Sbjct: 229 VWLDALTNYITGIGYDCDGGSTEQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGVELP 288

Query: 393 RDGMPI--------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
           +             KMSK  G+ +    +VD  G D+VR+ +L            +  + 
Sbjct: 289 KQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMV 348

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           E+   +    +     R  S+  +    F  +  D      + ++ +    E        
Sbjct: 349 ERMNSDLANILGNLVNRTISMSNK---YFGGVVADKGAAEAVDEDLKATVLE-------- 397

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGH-WSHGRENPRLRFVQANNRKLTMMRLQ- 561
                ++      E  ++A     +  +F+    S+   +    +  A +      RL  
Sbjct: 398 ----AVKKVEAKMEQLRVAD---AITEIFNIFRRSNKYIDETTPWALAKDEAKKD-RLAT 449

Query: 562 ----LVHAVAS 568
               L  A+A 
Sbjct: 450 VLYNLSEAIAI 460


>gi|254508427|ref|ZP_05120547.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548637|gb|EED25642.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 475

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 99/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KAQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + +++ IR +
Sbjct: 61  MQWMGLEWDEGPYFQSKRFDRYNEMIDKL------LAEDKAYKC---YASKELLEEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  +  A++G  +      PK  +    D  R 
Sbjct: 112 QEAA----------KEMPRYDANHPKVVAANAAAKEGDAFVVRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +A     ++ G  ++  V G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVVA---DDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|203288168|ref|YP_002223183.1| valyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085388|gb|ACH94962.1| valyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 877

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 60/214 (28%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +    +    +  +   +     +     N TG +H+GH     + D L   
Sbjct: 10  DPKVFEDKIYKRWLDNGVFSPDDKIELKFSMVA-PPPNVTGILHMGHALNFTLQDILVRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+     +  + AG        +VF +  + L  +  D                EL
Sbjct: 69  KRMKGFNTLWLFGTDHAG----IATQTVFEKQLRELGKSKDDF-----SREEFIEGILEL 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K+                         KII + ++ L   +D          G    +
Sbjct: 120 KNKHR------------------------KIIVNQVEKLGASYDHLRERFTLDDGLSRAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +G +Y+G         +     D +
Sbjct: 156 NKVFIDLYNKGLIYKGEYLVNLDPGSGSVVSDEE 189


>gi|187471090|sp|A8I819|SYE_AZOC5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 471

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 94/303 (31%), Gaps = 50/303 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A   A  G  + R   I D   Q         
Sbjct: 3   QIVTRFAPSPTGFLHIGGARTALFNWLYAK--AKGGKMLLR---IEDTDRQ--RSTKEAI 55

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               + L     D       G  +    +  A+++   +              Y+    +
Sbjct: 56  DAILEGLTWLGIDW-----DGDVIYQFAR--AERHRQAVEEMLSRGNAYPC--YATPEEL 106

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R+  +             D    +    R  +  L             P+   T   
Sbjct: 107 DEMRELARKEGRPPRYDGRWRDRPASERPTDRKPVIRLRA-----------PQEGVTVIE 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  + F +  +    D  LL+SDG+ TY    LA     ++ G  N+I   G DH  
Sbjct: 156 DQVQGTVTFPNKDLD---DLVLLRSDGTPTYM---LAVVVDDHDMGVTNIIR--GDDHLT 207

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
              R   +  A+     ++       + L       K+SKR G           +G D+ 
Sbjct: 208 NAARQTQIYNALGWDVPRMAH-----IPLIHGPDGAKLSKRHG----------ALGVDAY 252

Query: 423 RFM 425
           R M
Sbjct: 253 RDM 255


>gi|254831938|ref|ZP_05236593.1| glutamyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 491

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 45/309 (14%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     +   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQAIYEPLIQQLLDEGL-AYKCY 111

Query: 233 VKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  + A  +  +   ++   + +      E                    QG+     
Sbjct: 112 CTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     
Sbjct: 159 FKVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A   +      +      L  +    K+SKR G  I  
Sbjct: 213 HVLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQF 265

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 266 IEQYRDLGY 274


>gi|2500980|sp|Q43768|SYE_HORVU RecName: Full=Glutamyl-tRNA synthetase,
           chloroplastic/mitochondrial; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS; Flags:
           Precursor
 gi|603849|emb|CAA58505.1| glutamate--tRNA ligase [Hordeum vulgare subsp. vulgare]
 gi|326510497|dbj|BAJ87465.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522833|dbj|BAJ88462.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 560

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 91/280 (32%), Gaps = 34/280 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G +        D          +V       
Sbjct: 49  APSPTGNLHVGGARTALFNYLFAR---SRGGKFVLRVEDTDLERSTKKSEEAVLTDLSWL 105

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +     L  +++ +L+         + + +     ++ +++ 
Sbjct: 106 GLDWDEGPDIGGDFGPYRQSERNALYKEHAQKLMESG-----AVYRCFCSNEELEKMKET 160

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
              + I   +++          +     +     +G  Y      PK  + +  D+ R +
Sbjct: 161 ANRMKIP-PVYMG------KWATASDAEVQQELEKGTPYTYRFRVPKEGSLKINDLIRGE 213

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + +    +GD     +++S+G   Y      D A  +  +         V+ ++      
Sbjct: 214 VSWNLNTLGDF---VIMRSNGQPVYNFCVTVDDATMRISH---------VIRAEEHL--- 258

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               +  A+  K     + L   V L       K+SKR G
Sbjct: 259 -PNTLRQALIYKALGFAMPLFAHVSLILAPDKSKLSKRHG 297


>gi|331002319|ref|ZP_08325837.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410135|gb|EGG89569.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 654

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 78/499 (15%), Positives = 155/499 (31%), Gaps = 83/499 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D +A      G+EV  +   ++ G +I   A   
Sbjct: 9   TTAIAYASGKP----HIGNTYEIVLADAIARFRREEGHEVFFQTGTDEHGQKIENKAKEA 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ + N    +         +  +     DK+     +  +++   I K +  Q  
Sbjct: 65  GITPKEYVDNAAGQI-------RKIWDMMNTSYDKFIRTTDDDHKKQVQKIFKKFYDQG- 116

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D  K           E  F   D   +         +     G + P K      
Sbjct: 117 -----DIYKGFYEGMYCTACESFF--TDSQLVDG-------KCPDCHGDVYPAKEDAYFF 162

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYERG----FD--N 351
                   L +      +  +P+ + +     F      DL   +  +  G    FD  +
Sbjct: 163 KMSKYADRLIKHINEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKH 222

Query: 352 MIYVM-----------GSDHSG-----YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD- 394
           + YV            G D  G     + K   A    + +   + + +   +  +  D 
Sbjct: 223 VTYVWLDALSNYITGIGYDVDGESSERFKKLWPADLHLIGKDIIRFHTIYWPIFLMALDL 282

Query: 395 -------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFC 440
                  G P       KMSK  G+ +    +VD  G D+VR+ +L            + 
Sbjct: 283 PLPKQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWD 342

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            + E+   +    +    +R  S+  +  D       D         E + D  ++ L+ 
Sbjct: 343 LMVERFNSDLANVLGNLVSRTISMSNKYFDGVLTDTKDESVAGA--TEIDTDLKDVVLMS 400

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
                   +E A       ++A  + ++ ++F     +   +    ++ A        RL
Sbjct: 401 --------VEKAVKKMSELRVADAITEIWTLFKRC--NKYIDETTPWILAKEED-KKSRL 449

Query: 561 Q--LVHAVASIINSGLNII 577
           Q  L +  A  I  G +++
Sbjct: 450 QTVLYNL-AESIAIGASLL 467


>gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 665

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 110/333 (33%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAAEAGISPQTYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+ +           +++      +E+      +LL   +        W  +  +++
Sbjct: 74  MAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ ++ +  D     I           ++SE+ +          ++     Q    + 
Sbjct: 134 FTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLVAFFKEQPDFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y   
Sbjct: 194 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYATA-LGY-GQ 251

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +         L+     + +DG
Sbjct: 252 MDHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G DS+R+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLVERFGLDSLRYYLMR 337


>gi|312601349|gb|ADQ90604.1| Methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 513

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 144/440 (32%), Gaps = 55/440 (12%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-AGAQINTLALSVFWRYQQALYN 191
           +G +H+GH    V+   + +    SG+E  R +  +D  G +I+ LA       Q+ +  
Sbjct: 15  SGRLHIGHLYTTVLAWVIRNFKKMSGFEA-RLFTGSDEHGQKISQLAAKANLEPQEFVDK 73

Query: 192 NDSDLP----EGYYPGVYLK---------HVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           N  +      +      Y +          + K     Y    +   E + L  + D   
Sbjct: 74  NVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEYQGLYSISDEEF 133

Query: 239 QAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPP 294
            +  + +  +      ++      ISE  +        + + D L     ++++  +   
Sbjct: 134 LSQSQAVYQNGNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENPKFIFDSKIANE 193

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR--------PLLKSDGSYTYFAADLAYFKCKYE 346
             +   +  ++   +  ++   G  +D+          L +  SY     D    +   +
Sbjct: 194 LRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVFKDQIDLENPKK 253

Query: 347 RGF----DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             F      +I V+G +    + R   +   +  K     +    L   +      KMSK
Sbjct: 254 SNFWTDSAQIIQVVGKE----IARFHCIYWPIFLKSLNFRLPSIILTHGWLITPEGKMSK 309

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ I    ++ +   + ++F  + + N++  D  F +   ++  N  F   +     R
Sbjct: 310 SKGNVINPLDLLKKFDPEIIKFYFVSQINTKN-DSVFDENLLENFYNSFFVNTFGNLISR 368

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR-----VIENATIAQE 517
           +I      I    D  L         ++    E  L+  L E+        IE A     
Sbjct: 369 TI----ALIVKKFDQPLLFEIADLDWTDISFYEKILL-SLDEFCDNFDQLEIEKAFKT-- 421

Query: 518 PYKLAFYLYDLASVFHGHWS 537
                  + +L    +G + 
Sbjct: 422 -------VIELTKNLNGFFD 434


>gi|238897458|ref|YP_002923135.1| valine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465213|gb|ACQ66987.1| valine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 972

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +      +  I     N TG +H+GH     + D L 
Sbjct: 11  TYDPESIEQPLYEYWEKQGYFKPSNRTDQEQFCIMIPPPNVTGSLHMGHAFQQTIMDILI 70

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 71  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + D+  ++  KI R  ++ L    D              
Sbjct: 100 KIASEEGKTRHDYGREAFIQKIWDWKAESGGKITRQ-MRRLGNSVDWERERFTMDEDLSL 158

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G          +    D +
Sbjct: 159 AVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 194


>gi|77361341|ref|YP_340916.1| valine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|90101546|sp|Q3II73|SYV_PSEHT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76876252|emb|CAI87474.1| valine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 951

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 64/217 (29%), Gaps = 34/217 (15%)

Query: 93  LSPSYLRKILSSIVVSGIE--YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           +  +Y  + +   +  G E        G+G   +I     N TG +H+GH     + DTL
Sbjct: 1   MDKTYNPQDIEQSLYQGWEEKGYFKPSGQGVPYSIMIPPPNVTGSLHMGHAFQDTIMDTL 60

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G     +   + AG     L                               V 
Sbjct: 61  TRFKRMQGNNTLWQVGTDHAGIATQML-------------------------------VE 89

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           ++L  +      +   E ++  + ++  ++   I +  L+ L    D          G  
Sbjct: 90  RKLHAEEGKTRHDLGREDFINKIWEWKKESGGTITKQ-LRRLGASVDWDRERFTMDDGLS 148

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             ++++   L ++  +Y G               D +
Sbjct: 149 EAVKEVFVRLHKENLIYRGKRLVNWDPKLHTAISDLE 185


>gi|148560370|ref|YP_001258936.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371627|gb|ABQ61606.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 515

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYTGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|54020190|ref|YP_115920.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987363|gb|AAV27564.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 520

 Score = 46.4 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 145/440 (32%), Gaps = 55/440 (12%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-AGAQINTLALSVFWRYQQALYN 191
           +G +H+GH    V+   + +    SG+E  R +  +D  G +I+ LA       Q+ +  
Sbjct: 22  SGRLHIGHLYTTVLAWVIRNFKKMSGFEA-RLFTGSDEHGQKISQLAAKANLEPQEFVDK 80

Query: 192 NDSDLP----EGYYPGVYLK---------HVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           N  +      +      Y +          + K     Y    +   E + L  + D   
Sbjct: 81  NVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEYQGLYSISDEEF 140

Query: 239 QAMMKII---RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPP 294
            +  + +   R+    ++      ISE  +        + + D L     ++++  +   
Sbjct: 141 LSQSQAVYQNRNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENPKFIFDSKIANE 200

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR--------PLLKSDGSYTYFAADLAYFKCKYE 346
             +   +  ++   +  ++   G  +D+          L +  SY     D    +   +
Sbjct: 201 LRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVFKDQIDLENPKK 260

Query: 347 RGF----DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             F      +I V+G +    + R   +   +  K     +    L   +      KMSK
Sbjct: 261 SNFWTDSAQIIQVVGKE----IARFHCIYWPIFLKSLNFRLPSIILTHGWLITPEGKMSK 316

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ I    ++ +   + ++F  + + N++  D  F +   ++  N  F   +     R
Sbjct: 317 SKGNVINPLDLLKKFDPEIIKFYFVSQINTKN-DSVFDENLLENFYNSFFVNTFGNLISR 375

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR-----VIENATIAQE 517
           +I      I    D  L         ++    E  L+  L E+        IE A     
Sbjct: 376 TI----ALIVKKFDQPLLFEIADLDWTDISFYEKILL-SLDEFCDNFDQLEIEKAFKT-- 428

Query: 518 PYKLAFYLYDLASVFHGHWS 537
                  + +L    +G + 
Sbjct: 429 -------VIELTKNLNGFFD 441


>gi|317485023|ref|ZP_07943906.1| glutamyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923761|gb|EFV44964.1| glutamyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 464

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 54/230 (23%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           LA  Y  E     E+      K     A++  +R     L +  D    E  +       
Sbjct: 30  LARHYGGEFRLRIEDTDTERSKQEYTDAILASMRW----LGLDWD---GELTYQTQRTDR 82

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ------------------------ 308
             ++ID +   G+ Y     P + +  ++    + +                        
Sbjct: 83  YNEVIDKMIESGHAYWCSCTPEEVEAMREAARAKGEKPRYDGRCRERGLDAGPGRVVRLK 142

Query: 309 ------LLFR-------STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                 ++F        +T V +  D  L +SDG  TY   ++A     ++ G  ++I  
Sbjct: 143 IPTEGRVVFDDMVKGHIATDVSELDDMILRRSDGMPTY---NMAVVVDDHDMGITHVIR- 198

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            G DH     +   +  A+  +           V +       K+SKR G
Sbjct: 199 -GDDHVSNTPKQILIYQALGWELPVFGH-----VPMILGKDRQKLSKRHG 242


>gi|261749387|ref|YP_003257072.1| glutamyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497479|gb|ACX83929.1| glutamyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 508

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 89/276 (32%), Gaps = 20/276 (7%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G          D    +      +    +  
Sbjct: 14  APSPTGPLHLGGIRTALYNYLFA---KKYGGSFILRIEDTDRKRFVPNSESYIMETLKWC 70

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +    Y GV+L +   +  D Y   L    ++       D   +  +K  + +
Sbjct: 71  QIEPDEGV---GYGGVHLPYHQSQRGDIYRFHLSKLLDKGHAYYAFDTDEELYIK--KKE 125

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +   +      S         +  +  +      G+ Y      P  +  +  DM R  
Sbjct: 126 YQNRGLTFSYNASIRMGMNNSLTMTKKQLYTKLNSGFSYVIRFKIPPGEKLKMEDMIRGN 185

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           ++  +  +    D+ LLKS+G  TY    LA     +     ++I   G +    +    
Sbjct: 186 IVVNTDSLD---DKILLKSNGIATYH---LANTIDDHLMKITHVIR--GEEWLPSMSLHL 237

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            +  A          L    + L  DG   K+SKR 
Sbjct: 238 LLYRAFGWIPPSFAHL---PLILREDGKG-KLSKRN 269


>gi|54026880|ref|YP_121122.1| methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54018388|dbj|BAD59758.1| putative methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 518

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 106/345 (30%), Gaps = 74/345 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      GY+V      ++ G ++           QQA   
Sbjct: 17  PNGAPHIGHAYEYISADAIARFKRLDGYDVFFMTGTDEHGQKM-----------QQAAAA 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               + +       +         +   + L+   ++++         A + I    L  
Sbjct: 66  EGIPVQDLAARNSDVF--------ERLDKALDVSYDRFIRTTDADHRAASVAIWERMLAN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D        + G  S   +          + +G     ++KT      +     F
Sbjct: 118 GDIYLDN-------YAGWYSVRDEAFYTEEETTLLEDGSRISTETKTPVTWT-EESNFFF 169

Query: 312 RSTMVGD----------DVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNM 352
           R +   D          +   P  + +   +Y      DL+  +  ++ G       D++
Sbjct: 170 RLSKYQDRLLAHYEEHPEFIAPATRRNEIVSYVKAGLKDLSISRTTFDWGVPVPGHPDHV 229

Query: 353 IYVM--------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCE----------- 387
           +YV                +D   + K   A    + +   + + +              
Sbjct: 230 MYVWVDALTNYLTGVGFPDTDSPAFRKFWPADVHIIGKDITRFHTVYWPAFLMSAGVPLP 289

Query: 388 ---LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               V  +      KMSK  G+ +    +VDE G D+VRF +L  
Sbjct: 290 KRVFVHGFLYNKGEKMSKSVGNVVDPLELVDEYGLDAVRFFLLRE 334


>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|187629806|sp|A3DH43|SYC_CLOTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 468

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 98/331 (29%), Gaps = 54/331 (16%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+G+ R  ++ DTL   + + GY V                      ++ Q
Sbjct: 27  CGPTVYNYFHIGNARPFIIFDTLRRYLEYKGYNV----------------------KFVQ 64

Query: 188 ALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY----SVQAMM 242
              + +D  +      G+ +K +  +  ++Y  +      ++     +      ++  M+
Sbjct: 65  NFTDIDDKMIKRANEEGITVKELADKFINEYFVDAKGLGIKEATVHPRATENIDAIIEMI 124

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K + +   A N+  D++ S   F                  G +    L   +       
Sbjct: 125 KKLEEKGFAYNVDGDVYFSARKF---------------TEYGKLSHQSLEDLELGARIDV 169

Query: 303 DMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           D  +K      L           D P  K    +    + +A    KY       I +  
Sbjct: 170 DERKKDPMDFALWKAQKPGEPAWDSPWGKGRPGWHIECSAMA---NKY---LGETIDIHS 223

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                     E   A       +       L   + +    KM+K  G+F T+R +    
Sbjct: 224 GGQDLVFPHHENEIAQSEAANGKPFARFW-LHNGFINVDGEKMAKSKGNFFTVRDIAKTF 282

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             + +RF ML       ++F    +++    
Sbjct: 283 DYEVIRFFMLSAHYRSPINFSAELLEQAKNG 313


>gi|68485637|ref|XP_713301.1| hypothetical protein CaO19.9953 [Candida albicans SC5314]
 gi|46434783|gb|EAK94184.1| hypothetical protein CaO19.9953 [Candida albicans SC5314]
          Length = 509

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 132/403 (32%), Gaps = 68/403 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWR 184
           + +PTG +H+G  R A+    LA     +G E        D    +    + +  ++ W 
Sbjct: 45  APSPTGFLHLGSLRTALYNYLLA---KSTGGEFILRIEDTDRNRLVPGAEDNIINTLKWC 101

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                       P G Y     KH+      KY++ELL+          K Y  +  +  
Sbjct: 102 NLHIDEGPVEGGPYGPYRQSDRKHI----YQKYANELLSKGL-----AYKCYCSKERLLE 152

Query: 245 IRDDLKAL----NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +R+  + L    N+ +D     +  H G P  IR       +    Y         + + 
Sbjct: 153 LRESAQRLKPPTNVTYDRKCISESEHEGLPYVIR------FKSPNNYPPFRDLLHGELSL 206

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSD 359
           +   + K   F         D  ++K+DG  TY  A++       +     + +V+ G +
Sbjct: 207 QPQYNDKDRRFD--------DFVIVKNDGMPTYHFANV------IDDHLMKITHVVRGEE 252

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------ITL 410
                 +  A+  A+  +  Q        + L       K+SKR+GD          I  
Sbjct: 253 WLPSTPKHIAMYHAMGWEPPQYIH-----IPLLTSLKDKKLSKRSGDLNILKLKDEGILP 307

Query: 411 RHVVDEVG--------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             +V+ V         S+  +F  +   +  +  F   K+ + + +     + Y      
Sbjct: 308 EALVNFVALFGWSPVRSNGEKFNEVMDLSDIIELFSIDKLTKGNAKVNDSKLYY-----F 362

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           +    AK +      +       P    F       +  L ++
Sbjct: 363 NKLHLAKKLESAEGLETLVEEYYPHFKRFSNQSKDYLYKLLKF 405


>gi|304386413|ref|ZP_07368746.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327770|gb|EFL94997.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 675

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 129/418 (30%), Gaps = 73/418 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      G +V      ++ G +I         +  +AL+ 
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIE--------QKAEALHT 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +    G  +K +  +L +  + + +   +E       + SVQ + + + D    
Sbjct: 69  TPQAYVDDMAKG--IKEL-WKLLEISNDKFIRTTDEA-----HEKSVQYIFQKLLDQGDI 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMDRKQ 308
              +++ + S  D      S + ++  +   +   G    G       + +    M +  
Sbjct: 121 YLGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYA 180

Query: 309 LLFRS--TMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIYVM- 356
                      D +       +    +      DLA  +  ++ G        ++IYV  
Sbjct: 181 DWLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWI 240

Query: 357 ------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------- 394
                       GSD     KR   A    V ++  + + +   ++              
Sbjct: 241 DALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYG 300

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL------------LDF 437
                    KMSK  G+ I    +V++ G D++R+ +L                   ++F
Sbjct: 301 HGWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINF 360

Query: 438 DFCKVKEQSKENPVFYV-QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           D            V  + +Y      +   Q+     D D +      I    E   S
Sbjct: 361 DLANDLGNLLNRTVAMINKYEGGVIPTF--QSGVNEVDADLEKVAAETIKNYQELMES 416


>gi|270290915|ref|ZP_06197139.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280975|gb|EFA26809.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 675

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 129/418 (30%), Gaps = 73/418 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      G +V      ++ G +I         +  +AL+ 
Sbjct: 17  PSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIE--------QKAEALHT 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +    G  +K +  +L +  + + +   +E       + SVQ + + + D    
Sbjct: 69  TPQAYVDDMAKG--IKEL-WKLLEISNDKFIRTTDEA-----HEKSVQYIFQKLLDQGDI 120

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMDRKQ 308
              +++ + S  D      S + ++  +   +   G    G       + +    M +  
Sbjct: 121 YLGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYA 180

Query: 309 LLFRS--TMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERG------FDNMIYVM- 356
                      D +       +    +      DLA  +  ++ G        ++IYV  
Sbjct: 181 DWLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWI 240

Query: 357 ------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------- 394
                       GSD     KR   A    V ++  + + +   ++              
Sbjct: 241 DALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYG 300

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL------------LDF 437
                    KMSK  G+ I    +V++ G D++R+ +L                   ++F
Sbjct: 301 HGWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINF 360

Query: 438 DFCKVKEQSKENPVFYV-QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           D            V  + +Y      +   Q+     D D +      I    E   S
Sbjct: 361 DLANDLGNLLNRTVAMINKYEGGVIPTF--QSGVNEVDADLEKVAAETIKNYQELMES 416


>gi|168484422|ref|ZP_02709374.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042357|gb|EDT50403.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|149184557|ref|ZP_01862875.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831877|gb|EDL50310.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 519

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 99/325 (30%), Gaps = 37/325 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    V  D +A      G +V  +   ++ G ++   A  +    ++    
Sbjct: 14  PNGKPHIGHAYETVAADVIARFQRLMGRDVRFQTGTDEHGLKMAQKARDLGKTPRELADE 73

Query: 192 NDSDLPEGYYPGV--YLKHVGKELADKY---SSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                 + +      Y + +     D +    +       +  L + +     ++     
Sbjct: 74  MSGAFKDLFDRLDITYDRFIRTTDEDHHKASRAIWEAMEAKSDLYLDRYEGWYSVRDEAY 133

Query: 247 DDLKAL-----------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV----YEGIL 291
            D K L                 +  E+ +          +++ L   G++        +
Sbjct: 134 YDEKELVEGEGGEMLSPQGTPVEWTEEETWFFRLSKYAEPLLELLNTPGFLEPASRRNEM 193

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYER 347
                   +   + R    +   + G D     +  D    Y       D      KY  
Sbjct: 194 IAFVEGGLKDLSVSRTSFDWGVKVPGADNHVMYVWVDALTNYITGVGYPDGGEMWDKY-- 251

Query: 348 GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            +   ++++G D    + R   V   A  +S        +      L R    +K SK A
Sbjct: 252 -WPASLHLIGKD----IVRFHTVYWPAFLMSANIPLPKQVFGHGFLLNRG---VKESKSA 303

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+      ++D  G DS+R+ ++  
Sbjct: 304 GNVTDPIELIDLFGVDSLRYFLMAE 328


>gi|312135924|ref|YP_004003262.1| glutamyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775975|gb|ADQ05462.1| glutamyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 485

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 91/285 (31%), Gaps = 40/285 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLK 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D  +  G   G Y      ++  KY   L              Y  +  +
Sbjct: 63  WLGIEW----DEGIEVGGPHGPYRSTERVDIYKKYVDVLFEKG-----YAYHCYCTEEEL 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R  L +   Q   ++ +        +   +      ++G         P+       
Sbjct: 114 EAQRQQLLSQG-QMPRYLGKC------RNLTEEQKRRFEQEGRKPTVRFKVPEGVKIVVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +H  
Sbjct: 167 DLVRGDVEFMSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEEHLS 218

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  Q        V L       KMSKR G  
Sbjct: 219 NTPRQILIYNALEFELPQFAH-----VSLILGKDRTKMSKRHGST 258


>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 946

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 32/191 (16%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     A           VL    V    DG   KMSK  G+ I   
Sbjct: 572 LYLEGSDQHRGWFQSALLAAVGTRGTAPYKAVLTHGFVV---DGKGKKMSKSIGNVIAPG 628

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++++ G++ +R         + +      +K+ +          AY + R+  R     
Sbjct: 629 QIIEKHGAEILRLWAASEDYRDDIRISDNILKQLAD---------AYRKIRNTVRFLLGN 679

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYDL 528
             D D         P E+E D  +  +   LA + ++ E       + E +++       
Sbjct: 680 LHDFD---PTAPGAPPEAEMDELDRWI---LARFEQLKEKTRTGYDSFEFHQV------- 726

Query: 529 ASVFHGHWSHG 539
              +HG ++  
Sbjct: 727 ---YHGLYNFC 734


>gi|227503056|ref|ZP_03933105.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49725]
 gi|227076117|gb|EEI14080.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49725]
          Length = 936

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 109/351 (31%), Gaps = 50/351 (14%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    VS   +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 50  PQAVEKDLYEGWVSAGYFTPDASSEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 109

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    T                                V   L 
Sbjct: 110 RMQGYATLWLPGADHAGIATQT-------------------------------KVEARLR 138

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++   +  ++  E+++  V ++  Q     I++ ++A+    D          G    ++
Sbjct: 139 EQEGKKRWDYEREEFIDKVWEWKEQYG-GTIQNQMRAIGDSVDWTRERFTLDEGLSRAVQ 197

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPLL 325
            I  NL  +G +Y        S   +           D++ + +  R   + DD    ++
Sbjct: 198 TIFKNLYDEGMIYRANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHLIV 257

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVL 384
            +    T    D+A      +  + +++          +  R +     +++    ++  
Sbjct: 258 ATTRVET-MLGDVAIAVHPDDERYAHLV-----GQELDHPFRDDLKLKIIADDYVDMDFG 311

Query: 385 LCEL-VRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVRFMMLWRKNSE 433
              + +    D     M  R   D  T+      +     RF  + R+++ 
Sbjct: 312 TGAVKITPAHDPNDYAMGTRHNLDMPTVMDTTGHIAHTGTRFDGMTREDAR 362


>gi|163746572|ref|ZP_02153930.1| glutamyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380457|gb|EDQ04868.1| glutamyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 466

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 127/413 (30%), Gaps = 73/413 (17%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A                   G +   L +   
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR----------------GRGGKF-LLRIEDT 46

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R +      ++ L    + G  L H G+ ++   ++        + L   K Y   A  
Sbjct: 47  DRARSTPEATEAILKGMAWLG--LDHDGEIVSQFENAPRHAEVANELLAQGKAYKCFASQ 104

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             I    +A   +    +    +   DP+   D           Y   +  P   TT   
Sbjct: 105 DEITAFREAAKAEGRSTLYRSPWRDADPASHPDA---------PYVIRIKAPLEGTTVIR 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++  V G DH  
Sbjct: 156 DQVQGDVTIRNDQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHV--VRGDDHLN 207

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR----------- 411
              R   +  A+  +     V +   + L       K+SKR G                 
Sbjct: 208 NAARQMMIYEAMGWE-----VPVWAHIPLIHGADGKKLSKRHGALGAQEYQVMGFPAAGM 262

Query: 412 ----------HVVDEVGSDSVR--FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
                     H  DE  +D+    +  L         FD  K++           Q+   
Sbjct: 263 RNYLARLGWSHGDDEFFTDAQAQDWFDLNGIRKSPAQFDLKKLENLCG-------QHIAQ 315

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
              +  R+  +I   LD    P     Q    + +   L      +P ++E A
Sbjct: 316 ADDAALRR--EIEAYLDAAGLPSLTEAQAEGLERAMYCLKDRAKTFPELLEKA 366


>gi|320160387|ref|YP_004173611.1| glutamyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994240|dbj|BAJ63011.1| glutamyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 497

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 85/286 (29%), Gaps = 47/286 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MH+G  R A+    LA       ++     +  R  Y+         L   + 
Sbjct: 13  APSPTGRMHLGSGRTALYNYLLARKTGGQFILRIEDTDQKR--YV---PTAEQELIDGMH 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSVQ 239
           W   Q     D   P G Y     K +    A    +       F   + L  V+     
Sbjct: 68  WLGLQWDEGPDVGGPYGPYRQSERKEIYLHYARQLVESGHAYYCFCTPERLEKVRQEQQA 127

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKT 298
                                 E   + G    I  D       +G  +      P+   
Sbjct: 128 R--------------------KEQPHYDGTCRHIDPDEAARRVARGERHVIRFKTPREGV 167

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D+ R ++   + ++ D     ++KSDG   Y    LA     +     ++    G+
Sbjct: 168 TVVRDLLRGEITVENRLIDDY---VIVKSDGLALYH---LAAMVDDHLMKITHV--FRGA 219

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +          +  A   ++ +   L   L    +     KMSKR 
Sbjct: 220 EWLPTFPLHALIIRAFGWQEPEFIHLSVFLKPSGKG----KMSKRE 261


>gi|256841112|ref|ZP_05546619.1| glutamyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256736955|gb|EEU50282.1| glutamyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 505

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 102/294 (34%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G ++     I D  +Q    
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQNGGDMILR--IEDTDSQ--RF 52

Query: 178 ALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                    +AL        E    G   G Y +   +E+  KY  +LLN          
Sbjct: 53  VPGAEDYIIEALTWLGIKFDEGVSFGGNYGPYRQSERREIYKKYVDQLLNDG-----HAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +   A ++  R ++     Q+D   S     R   +   + + +L   G+ Y      
Sbjct: 108 IAFDTPAELEEKRKEIANF--QYD--ASTRSQMRNSLTLSPEEVQSLIESGHQYVVRAKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
             ++     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPNEDIHVNDLIRGEVVINSSILD---DKVLYKSADQLPTYH---LANIVDDHLMEVTHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +      +    +     L+         K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRFFGWEDTMPSFAHLSLLLKPEG--NGKLSKRDGD 267


>gi|256159715|ref|ZP_05457462.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254977|ref|ZP_05460513.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222163|ref|ZP_05936444.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265998128|ref|ZP_06110685.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920747|gb|EEX87400.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262552596|gb|EEZ08586.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 515

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWHSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|206900100|ref|YP_002251787.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739203|gb|ACI18261.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 628

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 107/322 (33%), Gaps = 35/322 (10%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ----- 187
               H+G     +V DT A       Y+V     +++ G ++   A    +  Q+     
Sbjct: 15  NSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQEKGYMPQEYVDMM 74

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI---VKDYSVQAMMKI 244
           A    ++    G     +++   K   +          +E +L        Y        
Sbjct: 75  AQKFLETWKKIGITNDDFIRTTQKRHEEVVQKVFQKLYDEGYLYKGSYAGWYCTPCETFW 134

Query: 245 IRDDLKALNI----QHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTT 299
            ++DL   N     +   ++ E+ ++    +    ++  +     +VY            
Sbjct: 135 QKEDLHDGNCPSCGRPVEWLEEETYYFKLSAFAEPLLKYIEEHPEFVYPETRRNEVISFI 194

Query: 300 QKCDMDRKQLLFRSTMVG------DDVDRPLLKSDGSYTYFAADLAYFKC---KYERGFD 350
           +    D      R+T+        D      +  D    Y +A L Y      K++R + 
Sbjct: 195 KSGLKDISAT--RTTVKWGVPVPFDPKHTVYVWFDALVNYISA-LGYLTNDDTKFKRYWP 251

Query: 351 NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             I+++G D    + R  A+      ++        +L       + G   K+SK  G+ 
Sbjct: 252 ADIHLIGKD----ILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGG---KISKSKGNR 304

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +    +++  G D++R+ +L  
Sbjct: 305 VDPHELINLYGVDALRYFLLRE 326


>gi|161523963|ref|YP_001578975.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351276|ref|YP_001946904.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|254782377|sp|A9AGN6|SYI_BURM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160341392|gb|ABX14478.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335298|dbj|BAG44368.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 945

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 99/313 (31%), Gaps = 49/313 (15%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEKSGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ----LIVHLAEY 505
                   Y R R+  R       D D+      V  +  E D   +     L   L  Y
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAQHAVPV-DEWLEIDRYAVAFSAQLQTELLAY 722

Query: 506 PRVIENATIAQEPYKLA----FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                      E + +      Y    +    G +    ++ RL     ++R     +  
Sbjct: 723 -------YEKYEFHPVVAKLQTYC---SEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTA 771

Query: 562 LVHAVA---SIIN 571
           L H       ++ 
Sbjct: 772 LYHLTQGLLRVLA 784


>gi|83816484|ref|YP_445913.1| glutamyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757878|gb|ABC45991.1| glutamyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 506

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 93/288 (32%), Gaps = 47/288 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+     A              +  D   +I     + +    + 
Sbjct: 30  APSPTGRLHIGGLRTALYNYLFAR------------KHDGDFVLRIEDTDQARYEPGAED 77

Query: 188 ---------ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                     L +++     G Y   Y +    E   +Y+             +V+    
Sbjct: 78  DIREALAWTGLEHDEGPEQGGDY-APYRQSERSEHYHEYA-----------QKLVEAGRA 125

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                   +  +          S     R   +   + ++    +G  Y   L  P+ ++
Sbjct: 126 YYAFDTEEELEELREEHGAYDGSTRRQMRNSLTLSDEKVEQRIDEGDDYVIRLKVPRQES 185

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            Q  D  R  + F ++ +    D+ L+KSDG  TY    LA     +     ++I   G 
Sbjct: 186 VQVEDEIRGTVSFDTSEID---DQVLVKSDGMPTYH---LANIVDDHLMNISHVIR--GE 237

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +      +   +  A+  +      L    + L  +G   K+SKR  +
Sbjct: 238 EWLSSTPKHVLMYDALGWEPPAFAHL---PLILSPNGG--KLSKRDAN 280


>gi|253998233|ref|YP_003050296.1| isoleucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984912|gb|ACT49769.1| isoleucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 935

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 17/169 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +       A+  +     +L    V    DG   KMSK  G+ +  +
Sbjct: 568 LYLEGSDQHRGWFQSSLLTGCAIDGRAPYNALLTHGFVV---DGAGHKMSKSKGNVVAPQ 624

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D  G+D +R  +     S  L      +K  ++          Y R R+  R     
Sbjct: 625 KVMDTYGADILRLWVASTDYSGELTISDEILKRVAEG---------YRRIRNTLRFLLAN 675

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             D D        + Q  E D   L L   L E   ++++     E + 
Sbjct: 676 LADFDAS-KDLLPVDQWLEIDRYALVLTTQLQE--SIVKD-YDKYEFHL 720


>gi|238855586|ref|ZP_04645888.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664778|ref|ZP_05865629.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932728|ref|ZP_06338136.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472661|ref|ZP_07813150.1| methionine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831803|gb|EEQ24138.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529379|gb|EEQ68380.1| methionine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561261|gb|EEX27234.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303138|gb|EFA95332.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 662

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 108/342 (31%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    +  D++A      GY+                    +    +  L  
Sbjct: 16  PSGRLTIGNAYTTIAADSMARYKRSQGYDTF-----------------FLTGTDEHGLKI 58

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+ ++ K+  + +    L+   +K++       V+++ KI    LK 
Sbjct: 59  EQKAEKAGIKPQEYVDNMAKQYKELWKK--LDISYDKFIRTTDADHVKSVQKIFEKLLKQ 116

Query: 252 -----------LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                       +++ + + +E             +I  +A  G+  + +  P       
Sbjct: 117 GDIYLGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMS 176

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIY 354
           K      +    +        R     +        DL+  +   + G        +++Y
Sbjct: 177 KYADRLLKYYKENPDFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVY 236

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGM---- 396
           V              GSD     K+   A    V ++  + + +   ++ +  D      
Sbjct: 237 VWIDALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQ 296

Query: 397 ----------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ +    +VD  G D++R+ ++ 
Sbjct: 297 IFGHGWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMR 338


>gi|194873283|ref|XP_001973176.1| GG15950 [Drosophila erecta]
 gi|190654959|gb|EDV52202.1| GG15950 [Drosophila erecta]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 87/230 (37%), Gaps = 30/230 (13%)

Query: 348 GFDNM--IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G D +  +Y+ G D  +G+ +    ++ A  E      + +        D    KMSK  
Sbjct: 575 GKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGF---TVDEKGYKMSKSL 631

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I+ + +  + G+D++R+ +       +      K+ +Q+ EN          + R  
Sbjct: 632 GNVISPKQITKKYGTDALRWWVASHGTQHMSITVSDKLLQQAAENLG--------KVRGT 683

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R  K +  +         +IP  S+       L+  L E+   +E    A E  ++  Y
Sbjct: 684 LRYLKGVIGE---KQSAEKLIPT-SDKSYLNRYLLSELVEFESEVEKLYNAYEYNRVVAY 739

Query: 525 LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + +A+     + H     + R    +++++         A+   ++  
Sbjct: 740 VQNFIANQVSAVYVH---LIKDRLYCGDDQEI--------LAIRQTLSHC 778


>gi|172060412|ref|YP_001808064.1| valyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|171992929|gb|ACB63848.1| valyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 955

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|254252588|ref|ZP_04945906.1| Valyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895197|gb|EAY69077.1| Valyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 954

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 79/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQKSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVKLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVAVMVHPEDERYAHLI 244


>gi|309359766|emb|CAP32329.2| CBR-EARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 467

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 139/405 (34%), Gaps = 90/405 (22%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +      +  R  +++DA  ++     
Sbjct: 12  APSPTGHLHIGGLRTALFNYLFAKKHGGDFVLRI-----EDTDRARFVDDAQDKV----- 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++     +    E      + +     L D        F  E  L +++  + +
Sbjct: 62  ------RRPREGGNYGPYEQSKRLDHYQQAAHHLIDS-GHAYRCFCPEHRLELLRKTAEK 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                                      RG+         +L  +       +        
Sbjct: 115 ---------------------------RGEIPKYDRKCAHLTLEN---AKAMADNGESFV 144

Query: 300 QKCDMDRKQLLFRSTMVG------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  +D++ + F+  + G      D+ D  LLKSDG  TY    LA      +    ++I
Sbjct: 145 VRFKLDKQNVQFQDEVFGTVNQCIDESDPVLLKSDGFPTYH---LANVIDDRKMDISHVI 201

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              G +      + + +  A +    +        + L       K+SKR  D   + + 
Sbjct: 202 R--GMEWLSSTGKHQILYRAFNWTPPKFVH-----LSLIMRTATKKLSKRDKDA-FVAYY 253

Query: 414 VDEVGS--DSVRFMMLWRKNSELLDFDFC------KVKEQSKENPVFY--VQYAYARCRS 463
            D++G+  ++V  +M+ R  S + DFD        ++K+Q   + +    +   +   + 
Sbjct: 254 SDQLGALPEAVLNLMI-RNGSGIRDFDADHFYSLQEMKDQFDLSLLGRRNLLLDHDSLQK 312

Query: 464 IFRQAKDIFPDLDFDLFPR---NVIPQESEFDTSELQLIVHLAEY 505
             R A   F   DF+       +++ ++ +F+  E + I  +  +
Sbjct: 313 YSRMA---FKSADFEFLYPRIVDLLKKDRKFEIPEKEHIRRIVSF 354


>gi|170702108|ref|ZP_02893020.1| valyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170132983|gb|EDT01399.1| valyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 955

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|167582160|ref|ZP_02375034.1| valyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 955

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  Q+    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKEQSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|262276791|ref|ZP_06054584.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
 gi|262223894|gb|EEY74353.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
          Length = 918

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 75/224 (33%), Gaps = 33/224 (14%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKC 343
           +YE           ++   D     +        +D+      S  ++TY          
Sbjct: 490 IYEIFKAEGSDAWYKRDKSDFLGKKYNVNDFAKVEDIVEVWFDSGSTHTYVLE------N 543

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           + +  +   +Y+ GSD   G+       +          ++L    V    DG   KMSK
Sbjct: 544 RQDLKWPADMYLEGSDQHRGWFHSSLLHSVGTRGNAPYKSILTHGFVV---DGKGQKMSK 600

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +    ++ + G D +R  ++    SE L  D   + + S+         +Y + R
Sbjct: 601 SLGNVVAPEEIIKKNGVDILRLWVVASDYSEDLRIDQSIISQHSE---------SYRKIR 651

Query: 463 SIFR------------QAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +  R            +  +    ++ D+    ++ + SE D  
Sbjct: 652 NTLRFLLGNIFDDFSFEEVENIKVVNLDIIDSFILNKISELDEK 695


>gi|213612875|ref|ZP_03370701.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 838

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|169349437|ref|ZP_02866375.1| hypothetical protein CLOSPI_00155 [Clostridium spiroforme DSM 1552]
 gi|169293512|gb|EDS75645.1| hypothetical protein CLOSPI_00155 [Clostridium spiroforme DSM 1552]
          Length = 479

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 99/307 (32%), Gaps = 62/307 (20%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAG 171
            KV + + + +PTG +H+G  R A+          GD +  L                  
Sbjct: 2   KKVRVRY-APSPTGHLHIGGARTALFNYLFAKHYDGDFIFRLED----TDIERNIEGGEA 56

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q++ LA       +  L   D   P       Y +    ++  KY+ ELL         
Sbjct: 57  NQLDNLAWLGIVPDESPLNPKDEYAP-------YRQMERLDIYRKYTQELL--------- 100

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              D  +        ++L+A + +         ++R       + +      G  Y   +
Sbjct: 101 ---DRGLAYKCFCTPEELEAEHDRQVNAGIAPMYNRKCRDLSPEEVAKKEAAGIPYTIRI 157

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P  KT +  DM R  + F S  +GD     L+K++G  TY  A               
Sbjct: 158 KVPTGKTYEFDDMIRGHVSFESDDIGDW---VLVKANGIPTYNYA--------------- 199

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL--------LCELVRLYRDGMPIKMSKR 403
              V+  DH+  +  +      +S    Q+ +             + L  +    K+SKR
Sbjct: 200 ---VVIDDHTMDITHVFRGEEHLSNTPKQLMIYDMFGWTAPTYGHMTLIVNEQRKKLSKR 256

Query: 404 AGDFITL 410
               +  
Sbjct: 257 DESIMQF 263


>gi|154484613|ref|ZP_02027061.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC
           27560]
 gi|149734461|gb|EDM50378.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC
           27560]
          Length = 879

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L S       +   +        I     N TG +H+GH     + D L   
Sbjct: 9   NPAEIEDRLYSKWQEKKYFHAEVDRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRF 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE              +  +++   +  + +   +  + +             + 
Sbjct: 69  KRMQGYEAL-------WLPGTDHASIATEAKIVEKMR--EEGITKEDLGREKFLDRAWQW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y   +++                         LK +    D          G    +
Sbjct: 120 KAQYGGRIVSQ------------------------LKKIGSSCDWDRERFTMDEGCSKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
           +++  NL  +G +Y G
Sbjct: 156 KEVFVNLYNKGQIYRG 171



 Score = 36.8 bits (84), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLD 436
           K   + +L     L RD    KMSK  G+ I    V+D+ G+D++RF ++        + 
Sbjct: 504 KVPFDTVLIHG--LVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRFTLITGNAPGNDMR 561

Query: 437 FDFCKVKEQSK 447
           F + +V+    
Sbjct: 562 FYWERVEASRN 572


>gi|154249040|ref|YP_001409865.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769323|sp|A7HJX5|SYV_FERNB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|154152976|gb|ABS60208.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 867

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 45/205 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +        +    +     G G K +I     N TG +H+GH     + D L+
Sbjct: 6   RYDPKNIEMKWYKHWLEKKYF--TPRGAGPKYSIVIPPPNITGKIHMGHALNITIQDILS 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++                    V W                  PG     +  
Sbjct: 64  RYKRMKGFD--------------------VLW-----------------LPGEDHAGIAT 86

Query: 212 ELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           + A +           +F  +++L IV +++     + I++ + ++    D         
Sbjct: 87  QTAVERYLSTQGKSRRDFSRDEFLNIVWNWA-NKYRQEIKNQIMSIGASVDWTRERFTLD 145

Query: 267 RGDPSPIRDIIDNLARQGYVYEGIL 291
            G    +R +  ++ ++G +Y+G  
Sbjct: 146 EGLSKAVRKVFVDMYKKGLIYKGKY 170


>gi|116250663|ref|YP_766501.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255311|emb|CAK06386.1| putative isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 982

 Score = 46.4 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 88/267 (32%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL   + +       +  +  F              D+      S  ++T+   D 
Sbjct: 544 VNARILEAFEHEGADAWFAEGAKERFLGNDHDHSRWTQVMDILDVWFDSGSTHTFTLED- 602

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 603 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 654

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 655 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 705

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE   ++       
Sbjct: 706 YRKLRNTIRWMLGTLAHDKGEEIALADLPELE-------QLMLHRLAELDELVRENYDTF 758

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 759 DFKKIARALIDFANVELSAFYFDIRKD 785



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 5/102 (4%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY+     Y+         +   +  +Y++  
Sbjct: 64  PYANGNIHIGHALNKILKDVINRSFQMRGYDA---NYVPGWDCHGLPIEWKIEEKYREKG 120

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            N D ++P   +     +     +  + + E      E    
Sbjct: 121 KNKD-EVPVNEFRRECREFAAGWIKVQ-AEEFKRLGIEGDFD 160


>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 930

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + + AV+ K     VL    V    D    KMSK  G+ +   
Sbjct: 555 LYLEGSDQHRGWFNSSLSTSVAVTSKPPYKAVLTHGFVV---DEKGRKMSKSLGNVVDPL 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V++++G+D +R  +        L      +K+ ++         +Y + R+  R     
Sbjct: 612 KVINQMGADILRLWVSSADYRGDLSVSQNILKQMTE---------SYRKIRNTARFLLGN 662

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D      +          + ++L   +      +  A    E + +
Sbjct: 663 LYDFDPAKDKVDYADLPELDRVALMELHKLIKR----VLAAYENYEFHVV 708


>gi|307705742|ref|ZP_07642587.1| glutamyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620660|gb|EFN99751.1| glutamyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     +L  KY  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----DLYQKYIDKLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         I      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 481

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 124/377 (32%), Gaps = 60/377 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R +VV D +   +                          ++  Y      N +D+
Sbjct: 37  HIGHARSSVVFDIIRRYL--------------------------IYKEYDVTFVKNFTDI 70

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL---PIVKDYSVQAMMKIIRDDLKALN 253
            +        +++  +   +   +  ++  EK     P     + + + ++I+   K + 
Sbjct: 71  DDKIIKRSNEENIHWKELTEKFIKEHDYDMEKLNIMPPDFTPKATEFIDEMIKLCEKLIE 130

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK-----Q 308
             +   +  D ++R         ++     G + +  L    +    + D  ++      
Sbjct: 131 KGYAYVVDGDVYYR---------VEKFKDYGKLSKRNLDELLAGARVEVDERKENPLDFA 181

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY----FKCKYERGFDNMIYVMGSDHSGYV 364
           L  +S       + P  K    +    + ++            G  ++I+     H   +
Sbjct: 182 LWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIF---PHHENEI 238

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + EA    +  K      +    V + ++    KMSK  G+F T+R ++ E   + +RF
Sbjct: 239 AQSEAAEEKMFAKYW----IHNGFVNINKE----KMSKSLGNFFTIREIIKEFDPEVLRF 290

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPR 482
            +L       +DF F  + E  +     Y          + ++ K+   + +  F+ F +
Sbjct: 291 FLLTTHYRSPIDFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANKIFENFKK 350

Query: 483 NVIPQESEFDTSELQLI 499
                  +   S   L 
Sbjct: 351 EFETSMDDDFNSAKALA 367


>gi|256960771|ref|ZP_05564942.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951267|gb|EEU67899.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 470

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 63/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 11  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 71  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  +   ++++ +   A  +  D++     F           ID L        G 
Sbjct: 121 -------ILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 166

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 167 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 220

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 221 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 280

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 281 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 336 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 387


>gi|210633398|ref|ZP_03297771.1| hypothetical protein COLSTE_01684 [Collinsella stercoris DSM 13279]
 gi|210159160|gb|EEA90131.1| hypothetical protein COLSTE_01684 [Collinsella stercoris DSM 13279]
          Length = 491

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 95/291 (32%), Gaps = 42/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R    N            V 
Sbjct: 10  APSPTGKLHIGGARTAIYNWAFARSCGGAFILRIDDTDPARSTEEN----------TQVI 59

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R  + L  +  + PE G   G Y +    ++  + +  LL           K Y     
Sbjct: 60  LRAMRWLGLDWDEGPEVGGDFGPYSQTERLDIYREAAERLLAEG--------KAYPCFCT 111

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + +  D +A   + D F     + R       D   +    G  Y   +  P+ +    
Sbjct: 112 PEQLAADREAAAARKDPFQG---YQRRCRDIPADEARSRMEAGEPYTLRIKVPEDRGNVV 168

Query: 302 C-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D    ++ F +  + D     + +SDG+ TY   + A        G  ++I   G DH
Sbjct: 169 INDAVHGKVTFDAKELDDF---VIFRSDGTPTY---NFATVVDDAAMGITHVIR--GDDH 220

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   V  A+         +    + L  DG   K+SKR G      
Sbjct: 221 LSNTPRQVMVYEALGAPVPTFAHIS---MILGADGK--KLSKRHGATSVEE 266


>gi|313200306|ref|YP_004038964.1| isoleucyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439622|gb|ADQ83728.1| isoleucyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 935

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 17/169 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +       A+  +     +L    V    DG   KMSK  G+ +  +
Sbjct: 568 LYLEGSDQHRGWFQSSLLTGCAIDGRAPYNALLTHGFVV---DGAGHKMSKSKGNVVAPQ 624

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D  G+D +R  +     S  L      +K  ++          Y R R+  R     
Sbjct: 625 KVMDTYGADILRLWVASTDYSGELTISDEILKRVAEG---------YRRIRNTLRFLLAN 675

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             D D        + Q  E D   L L   L E   ++++     E + 
Sbjct: 676 LADFDAS-KDLLPVDQWLEIDRYALVLTTQLQE--SIVKD-YDKYEFHL 720


>gi|239948258|ref|ZP_04700011.1| glutamyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241563402|ref|XP_002401689.1| tRNA synthetase, putative [Ixodes scapularis]
 gi|215501881|gb|EEC11375.1| tRNA synthetase, putative [Ixodes scapularis]
 gi|239922534|gb|EER22558.1| glutamyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 464

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 69/422 (16%), Positives = 141/422 (33%), Gaps = 73/422 (17%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I   + +PTG +H+G  R A+     A              + N          L +  
Sbjct: 5   VITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLRIED 45

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQA 240
             ++   N      E  + G+    +  +    + S+  N  +E  L +++D   Y    
Sbjct: 46  TDKERSTNIAV---EAIFSGLKWLGLDWDGEVIFQSKRNNLYKEAALKLLQDGKAYYCFT 102

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + I    +        FI   ++   +PS     I  + R        L  P+  +  
Sbjct: 103 SQEEIERQRQKALENKQHFIFNSEWRDKEPSTYPTDIKPVIR--------LKTPREGSIT 154

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             +  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G DH
Sbjct: 155 IHNTLQGEVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R  A+  A   +   +       + L       K+SKR G           +G +
Sbjct: 207 LTNAARQIAIYQAFGYEVPSMTH-----IPLIHGADGTKLSKRHG----------ALGVE 251

Query: 421 SVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYV-----QYAYARCRSIFR 466
           + + M          L R      D++   + +  +   +  +     +  +A+  S+  
Sbjct: 252 AYKDMGYLPESLCNYLLRLGWSHGDYEIISMTQAIEWFNLDSLGKSPSKLDFAKMNSLNA 311

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF-YL 525
               +  +         ++ Q  +    E+  I      P ++  +    E  +LA  YL
Sbjct: 312 HYLRMLDNDSLTSKTVEILKQNYKVSEKEISYITQAM--PSLLVRSETLLELTRLAQIYL 369

Query: 526 YD 527
            D
Sbjct: 370 VD 371


>gi|149011925|ref|ZP_01833073.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763880|gb|EDK70813.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 486

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|83721247|ref|YP_443148.1| valyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167620317|ref|ZP_02388948.1| valyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257139378|ref|ZP_05587640.1| valyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83655072|gb|ABC39135.1| valyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 955

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  Q+    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKEQSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|11499997|ref|NP_071243.1| leucyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122899|sp|O30250|SYL_ARCFU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2650668|gb|AAB91241.1| leucyl-tRNA synthetase (leuS) [Archaeoglobus fulgidus DSM 4304]
          Length = 932

 Score = 46.4 bits (109), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 89/278 (32%), Gaps = 32/278 (11%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                       +   +  K  +        G +H GH R   +GD  A  M   GY V 
Sbjct: 11  WQKAWEKDRIFESDPNEKEKFFLTIPYPYLNGNLHAGHTRTFTIGDAFARYMRMKGYNVL 70

Query: 163 --REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLP-EGYYPGVYLKHVGKELADKY 217
               +++   G  I  LA  +  R ++   +Y    D+P E        + + +  + + 
Sbjct: 71  FPLGFHV--TGTPIIGLAELIAKRDERTIEVYTKYHDVPLEDLLQLTTPEKIVEYFSREA 128

Query: 218 SSELLNFPEE-KWLPIV--KDYSVQAMMKIIRDDLKALNIQ-----------HDIFISED 263
              L +      W  +    D   Q  ++     LK L +            HD    ED
Sbjct: 129 LQALKSIGYSIDWRRVFTTTDEEYQRFIEWQYWKLKELGLIVKGTHPVRYCPHDQNPVED 188

Query: 264 -DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            D   G+ + I   ++    +  + +G L  P +    +       +  + T        
Sbjct: 189 HDLLAGEEATI---VEFTVIKFRLEDGDLIFPCATLRPETVFGVTNIWVKPTTY------ 239

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
            + + DG   + + + AY K  Y      ++  + +  
Sbjct: 240 VIAEVDGEKWFVSKE-AYEKLTYTEKKVRLLEEVDASQ 276


>gi|304309975|ref|YP_003809573.1| Isoleucyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795708|emb|CBL43907.1| Isoleucyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 937

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 105/326 (32%), Gaps = 55/326 (16%)

Query: 223 NFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              + +WLP      + AM+       + R     + I   +       H    + I ++
Sbjct: 441 EVEKVEWLPDWGKNRMDAMLDSSPDWCVSRQRTWGVPITLFVHKETQALHPQTAALIENV 500

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              +  +G      L   +       D ++             +D   +  D   T+   
Sbjct: 501 AKRIEEEGIDAWYQLDASELIGAAAPDYEKV------------MDTLDVWFDSGVTHST- 547

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +   +       D  +Y+ GSD   G+ +     A A+  +     VL         D 
Sbjct: 548 -VLEQRDHLRVPAD--LYLEGSDQHRGWFQSSLKTAVAMRGEAPYKAVLTHGF---TVDQ 601

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ ++ + V   +G+D +R  +        +     ++ +++ +       
Sbjct: 602 QGKKMSKSLGNVVSPQDVAKALGADVIRLWVAATDYRAEMTVS-DEILKRTAD------- 653

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
            +Y R R+  R         D         P+E    T +   +V L ++  V+  A   
Sbjct: 654 -SYRRIRNTARFLLANLNGFD---------PKEHLIATED---MVALDQW--VVHRAAEL 698

Query: 516 QEPYKLAFYL-YDLASVFHGHWSHGR 540
           QE   +A Y  Y L    H  +    
Sbjct: 699 QE-EIVAHYAQYQL----HAIYQKVH 719


>gi|189219552|ref|YP_001940193.1| Valyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186410|gb|ACD83595.1| Valyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 900

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 35/221 (15%)

Query: 90  NLYLS---PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           N +     P  ++  L    +    +  N        +I     N TG + +GH     +
Sbjct: 22  NFFPKAYEPLTVQDRLYKQWLEQKIFHANAHSSKPSFSIVMPPPNITGVLTLGHVLNNTI 81

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L+      G EV     ++ AG     +A+  +    + +                 
Sbjct: 82  QDILSRKARMEGKEVLWLPGLDHAGLA-TQVAVQKYLLKTKKIDPQ-------------- 126

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                              +E++L IV ++      KI+ + L+ L    D   +     
Sbjct: 127 ----------------TLSKEEFLKIVWEWKENHSQKIL-EQLQKLGCSADWQRTRFTLD 169

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 + +    L ++G +Y G         +Q    D +
Sbjct: 170 AAYSQAVANAFIRLYQKGLIYRGKRMINWCPASQTALSDEE 210


>gi|281358130|ref|ZP_06244614.1| valyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315503|gb|EFA99532.1| valyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 886

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 57/191 (29%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +G  +G     K     +     N TG + +GH     + D L       G
Sbjct: 18  AKWFPTWEKAGNFHGEPNPDKKPYSIV-IPPPNVTGILTLGHVLNNTLQDILCRYHRMKG 76

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            EV             +   ++   R ++ L                          + +
Sbjct: 77  EEVC-------WFPGTDHAGIATEARVEKYLR------------------------KEEN 105

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           +       E+++  V  +  +   KIIR  L+ L    D          G    ++ +  
Sbjct: 106 TGRDELGREEFIRRVWQWKGEFGGKIIRQ-LRTLGCSCDWERERFTMDEGLSEAVKKVFV 164

Query: 279 NLARQGYVYEG 289
            L  +GY+Y G
Sbjct: 165 ELYNKGYIYRG 175


>gi|148984365|ref|ZP_01817653.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|303254060|ref|ZP_07340176.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259570|ref|ZP_07345546.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262015|ref|ZP_07347960.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264471|ref|ZP_07350390.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267406|ref|ZP_07353262.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269764|ref|ZP_07355515.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|147923142|gb|EDK74256.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800821|emb|CBW33475.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|301802745|emb|CBW35516.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598970|gb|EFL66000.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636655|gb|EFL67145.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639122|gb|EFL69581.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640711|gb|EFL71107.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643071|gb|EFL73362.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645841|gb|EFL76069.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 486

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|21909706|ref|NP_663974.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895089|ref|NP_801439.1| glutamyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|30173170|sp|Q8K8P9|SYE_STRP3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|21903889|gb|AAM78777.1| putative glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28810334|dbj|BAC63272.1| putative glutamyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 481

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 94/284 (33%), Gaps = 25/284 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    +            + 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYAR--RHGGTFIIRIE-DTDRKRHVED-GERSQLENLKW 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  +  + PE +    Y +     L  +Y  +LL           K Y  +  +   R+ 
Sbjct: 66  LGMDWDESPETH--ENYRQSERLALYQQYIDQLLAEG-----KAYKSYVTEEELAAERER 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   +   +I+E  F           I      G V    L   +S   +  DM +  
Sbjct: 119 QEAAG-ETPRYINE--FIGMSADEKAKYIAEREAAGIVPTVRLAVNESGIYKWADMVKGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F    +G   D  + K DG  TY   + A     ++    ++I   G DH     +  
Sbjct: 176 IEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GDDHIANTPKQL 228

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 229 MVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|47094632|ref|ZP_00232266.1| glutamyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47016993|gb|EAL07892.1| glutamyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 313

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 45/309 (14%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     +   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQQLLDEGL-AYKCY 111

Query: 233 VKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  + A  +  +   ++   + +      E                    QG+     
Sbjct: 112 CTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     
Sbjct: 159 FKVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A   +      +      L  +    K+SKR G  I  
Sbjct: 213 HVLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQF 265

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 266 IEQYRDLGY 274


>gi|293399763|ref|ZP_06643909.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306163|gb|EFE47406.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 656

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 65/446 (14%), Positives = 131/446 (29%), Gaps = 82/446 (18%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
               K  K  I       +G  H+G+    V+ D +A      GY+V  +   ++ G +I
Sbjct: 2   CKECKKGKYYITTAITYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKI 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWL 230
                      ++          E       +     ++     D +        E +  
Sbjct: 62  -----------EEKAKEAGVTPKEFVDKVADIVRKNFDMMNTSYDYFVRTTDEGHERQVQ 110

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
            I K    Q    I +   + +     + F +E     G        +     + Y +  
Sbjct: 111 KIFKKLYEQG--DIYKGKYEGMYCTPCESFWTESQLIDGKCPDCGRPVQKATEEAYFFNL 168

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
               PK     +   +  Q   R   + ++  +P             DL   +  ++ G 
Sbjct: 169 QKYAPKLIKHIEEHPEFIQPESRKNEMINNFLKP----------GLQDLCVSRTSFKWGI 218

Query: 350 ------DNMIYVM-------------GSDHS---GYVKRLEAVAAAVSEKKAQINVLLCE 387
                 D+++YV               +D +    Y K   A    + +   + + +   
Sbjct: 219 PVDFDPDHVVYVWIDALSNYITSLGYDADGNHGENYKKYWPADVHIIGKDILRFHTIYWP 278

Query: 388 LVRLYRDGMPI---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN- 431
            + L   G P+               KMSK  G+ I    +V   G D+VR+ +L     
Sbjct: 279 -IMLMALGEPLPKQVFGHPWLLVGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPF 337

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           ++     +  + E+   +    +     R  S+  +  +             VI    E 
Sbjct: 338 AQDGTITWDLMVERINSDLANVLGNLVNRTISMQNKYFN------------GVISNPLEC 385

Query: 492 DTSELQLIVHLAEYPRVIENATIAQE 517
           +  + +LI    + P   +      E
Sbjct: 386 EDIDKELIDLALDTP---KRVAKKME 408


>gi|291279461|ref|YP_003496296.1| glutamyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754163|dbj|BAI80540.1| glutamyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 483

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 97/288 (33%), Gaps = 47/288 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG+ R A+     A       ++     ++ R              + ++ 
Sbjct: 8   APSPTGHIHVGNVRTALFNYLFAKHNNGKFILRIEDTDLERS----------TKESENLI 57

Query: 183 WRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQA 240
           +   Q L  +  + P  G   G Y +    ++  KY  +LL   +  K     ++   + 
Sbjct: 58  YEDLQWLGLDWDEGPIKGGDYGPYRQTERFDIYKKYVDKLLEEGKAYKCFCSKEELEEKK 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              +        N +                   + I+ L ++G V   I    + +   
Sbjct: 118 ERALKEGKPPRYNGKCRNLN-------------ENQIEELEKKG-VKPSIRFKVEDEDVV 163

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSD 359
             D+ + ++ F +   GD +   +++ DG+  Y       F    +     + +V+ G D
Sbjct: 164 VNDLIKGEITFNTDAFGDFI---IVRPDGTPVYN------FVVVIDDALMKITHVIRGDD 214

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           H     +   +  A+              + +       K+SKR GD 
Sbjct: 215 HLSNTPKQVLIYKALGFDIPYFAH-----IPMILGPDHSKLSKRHGDT 257


>gi|254774539|ref|ZP_05216055.1| valyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 882

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     +    V    +  N        +I     N TG +H+GH     + D L   
Sbjct: 16  DPAAAEYAIYRQWVDAGYFTANPASDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV  +  ++ AG                                V  K +  + 
Sbjct: 76  KRMQGYEVLWQPGMDHAGI---------------------------ATQSVVEKQLAVD- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 108 ----GKTKEDFGRELFIEKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R I   L   G +Y        S   Q    D
Sbjct: 163 RTIFKRLYDAGLIYRAERLVNWSPVLQTALSD 194



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 27/185 (14%)

Query: 363 YVKRLEAVAAAVSEKKA---------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V R+      V +  A         Q+      L  L RD    KMSK  G+ I     
Sbjct: 494 WVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDW 553

Query: 414 VDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           VD  G+D++RF +         L      V+                  R+   +  +  
Sbjct: 554 VDMFGADALRFTLARGASPGGDLAIGEDHVRAS----------------RNFCTKLFNAT 597

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SV 531
                +      +P   E   ++  ++  L E    +++A    E  +    LY  A   
Sbjct: 598 RYALLNGAQLAQLPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSRACESLYHFAWDE 657

Query: 532 FHGHW 536
           F   +
Sbjct: 658 FCDWY 662


>gi|291286934|ref|YP_003503750.1| glutamyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884094|gb|ADD67794.1| glutamyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 483

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 96/284 (33%), Gaps = 29/284 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A     +G +        D           +F   +  
Sbjct: 11  APSPTGYLHVGGARTALFNYLFA---KATGGKFLLRIEDTDRTRFQEDSLKEIFESLRWM 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D    +    G Y++    EL  K++ +L+           K +     +  +R +
Sbjct: 68  GLEWDEGPEKDGDFGPYIQSERLELYQKHAEQLIAEG-----HAYKCFCTPERLDQVRKE 122

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   QH  +  +          I++ ID+    G  Y   L  P        DM R  
Sbjct: 123 KEARKEQHGGY--DRTCRNLSADEIQENIDD----GKPYVVRLKAPLEGAISFEDMVRGI 176

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKRL 367
           +     MV    D  LLK+DG  TY  A +       +  F  + +VM G +      R 
Sbjct: 177 IETPVNMVD---DTVLLKTDGFPTYHLASV------VDDHFMKISHVMRGDEWIASTPRH 227

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             +  A   +     V     V L   G   K+SKR G    + 
Sbjct: 228 VLLYKAFGWEAP---VFAHLPVILSPTGG--KLSKRKGAASVMD 266


>gi|254973702|ref|ZP_05270174.1| glutamyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091092|ref|ZP_05320570.1| glutamyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312747|ref|ZP_05354330.1| glutamyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255648600|ref|ZP_05395502.1| glutamyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260681820|ref|YP_003213105.1| glutamyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685417|ref|YP_003216550.1| glutamyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260207983|emb|CBA60136.1| glutamyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211433|emb|CBE01533.1| glutamyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 493

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 40/293 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R       GA  N L    +
Sbjct: 8   APSPTGFVHIGSLRTALYNYLFAKKMGGEYILRVEDTDQSRLV----EGAIENMLNAMKW 63

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  + ++   + +    G Y++    ++  +Y  +LL+  +  +        + 
Sbjct: 64  AGVNHSEGVILDDSGKVVQKGEYGPYIQSQRLDIYQEYIKQLLDSGK-AYYCFCTKERLD 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +    R               E   + G   +  ++ ++   + G  Y   L  P++ T
Sbjct: 123 EVRDAQRA------------AGETAKYDGHCKNLSKEEVEANIKAGIPYVIRLRLPENHT 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ R  + F +  +    D+ L+K+DG  TY     A     Y     ++I   G 
Sbjct: 171 IKFTDLVRGDMEFNTNDLD---DQVLMKTDGFPTYHF---AVVVDDYLMKITHVIR--GE 222

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +      +   +  A   +      L   L     +    K+SKR GD     
Sbjct: 223 EWVSSTPKHVYLYEAFGWEAPVFVHLPNIL-----NKEKKKLSKRQGDVAVED 270


>gi|118463457|ref|YP_880951.1| valyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118164744|gb|ABK65641.1| valyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 882

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     +    V    +  N        +I     N TG +H+GH     + D L   
Sbjct: 16  DPAAAEYAIYRQWVDAGYFTANPASDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV  +  ++ AG                                V  K +  + 
Sbjct: 76  KRMQGYEVLWQPGMDHAGI---------------------------ATQSVVEKQLAVD- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 108 ----GKTKEDFGRELFIEKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R I   L   G +Y        S   Q    D
Sbjct: 163 RTIFKRLYDAGLIYRAERLVNWSPVLQTALSD 194



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 27/185 (14%)

Query: 363 YVKRLEAVAAAVSEKKA---------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V R+      V +  A         Q+      L  L RD    KMSK  G+ I     
Sbjct: 494 WVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDW 553

Query: 414 VDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           VD  G+D++RF +         L      V+                  R+   +  +  
Sbjct: 554 VDMFGADALRFTLARGASPGGDLAIGEDHVRAS----------------RNFCTKLFNAT 597

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SV 531
                +      +P   E   ++  ++  L E    +++A    E  +    LY  A   
Sbjct: 598 RYALLNGAQLAQLPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSRACESLYHFAWDE 657

Query: 532 FHGHW 536
           F   +
Sbjct: 658 FCDWY 662


>gi|126697617|ref|YP_001086514.1| glutamyl-tRNA synthetase [Clostridium difficile 630]
 gi|255099209|ref|ZP_05328186.1| glutamyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304992|ref|ZP_05349164.1| glutamyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|122974210|sp|Q18CD6|SYE_CLOD6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|115249054|emb|CAJ66865.1| Glutamyl-tRNA synthetase [Clostridium difficile]
          Length = 493

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 40/293 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R       GA  N L    +
Sbjct: 8   APSPTGFVHIGSLRTALYNYLFAKKMGGEYILRVEDTDQSRLV----EGAIENMLNAMKW 63

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  + ++   + +    G Y++    ++  +Y  +LL+  +  +        + 
Sbjct: 64  AGVNHSEGVILDDSGKVVQKGEYGPYIQSQRLDIYQEYIKQLLDSGK-AYYCFCTKERLD 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +    R               E   + G   +  ++ ++   + G  Y   L  P++ T
Sbjct: 123 EVRDAQRA------------AGETAKYDGHCKNLSKEEVEANIKAGIPYVIRLRLPENHT 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ R  + F +  +    D+ L+K+DG  TY     A     Y     ++I   G 
Sbjct: 171 IKFTDLVRGDMEFNTNDLD---DQVLMKTDGFPTYHF---AVVVDDYLMKITHVIR--GE 222

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +      +   +  A   +      L   L     +    K+SKR GD     
Sbjct: 223 EWVSSTPKHVYLYEAFGWEAPVFVHLPNIL-----NKEKKKLSKRQGDVAVED 270


>gi|94495661|ref|ZP_01302241.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425049|gb|EAT10070.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 972

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 17/212 (8%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D      +    E+ L + ++Y    +   + DD     +   I  +E      +     
Sbjct: 462 DSEPKAFVAETAEEALALAREYYGPDVQVDLPDDENPSGVGGMIHSNEGKLTGVELWRDP 521

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D++D          G L  P+  T+ + ++   Q     ++  ++ DR    S G     
Sbjct: 522 DVLDTWFSSALWPFGTLGWPEEPTSVRPELVEGQ-----SLSSENKDRASTGS-GRTGQS 575

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
                Y       GFD +++   +  +    +       V  +K  ++        L R 
Sbjct: 576 LLARHYPNDLLISGFD-ILFFWDARMAM---QGMEFMGDVPWRKLYLH-------GLVRA 624

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
               KMSK  G+ +    ++D  G+D++RF M
Sbjct: 625 ADGQKMSKSKGNVVDPLGLIDRFGADALRFFM 656



 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 34/198 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +             + R      T   I     N TG +H+GH         L 
Sbjct: 7   TFDPASIETRWYQHWEEKGLF-RPDRPDATPFTIVNPPPNVTGSLHIGH--------ALD 57

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           + +                    + +      R + AL+   +D        V  + +  
Sbjct: 58  NTLQ-------------------DIVIRYERLRGKDALWVVGTDHAGIATQMVVERQLN- 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                   +  ++  E ++  V ++  ++   I R  L+ L    D          G   
Sbjct: 98  ----AKGEKRTDYSREDFIAKVWEWKAESGGAITRQ-LRRLGCSMDWANERFTMDEGFSK 152

Query: 272 PIRDIIDNLARQGYVYEG 289
            +  +   L ++G +Y  
Sbjct: 153 AVVKVFVELHKRGLLYRD 170


>gi|49482759|ref|YP_039983.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295427067|ref|ZP_06819703.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|56749424|sp|Q6GJD9|SYC_STAAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49240888|emb|CAG39555.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295128855|gb|EFG58485.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
          Length = 466

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L     ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQTVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       D P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFH----ELGATIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF ++       ++++   V+     
Sbjct: 281 KEVDPDVLRFFVISVHYRSPINYNLELVESARSG 314


>gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 882

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 51/198 (25%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +             +           +I     N TG +H+GH     + D L 
Sbjct: 7   TYDPGKVEDKWYEYWEEKGFFEAETKPDRESFSIVMPPPNITGQLHLGHALDNTLQDILT 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +    + +   D       G   +    
Sbjct: 67  RWKRMKGYNTL-------WLPGTDHASIATEVKVVDKIRDEGLDKDSLGRDGFLKR--AW 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  ++Y   + +                         L+ L    D          G   
Sbjct: 118 EWKEEYGGRITSQ------------------------LRKLGSSCDWSRERFTMDEGCSR 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R++   L ++G +Y+G
Sbjct: 154 AVREVFVELYKRGLIYQG 171



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 15/154 (9%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +A    ++    +V +  L+   RD +  KMSK  G+ I    VV++ G+D++
Sbjct: 492 WVARMIFMALEFMDEPPFKDVYIHGLI---RDALGRKMSKSLGNGIDPLEVVEKYGADAL 548

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RFM++        D  F + + ++  N              I+  A+ I  + D DL P 
Sbjct: 549 RFMLITGNTPGN-DMRFREERLEASRN----------FANKIWNAARFILMNTD-DLDPS 596

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            +   + +   ++  ++  L +    ++ A    
Sbjct: 597 EIDENDLKLTLADKWMLSRLQKVIEEVDKAFEKY 630


>gi|269792312|ref|YP_003317216.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099947|gb|ACZ18934.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 829

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       SG  +      K     +E     P+G +H+GH R   +GD +A  +  +GY
Sbjct: 11  KWQKVWEESGAFHVERGGDKPKFYCLEMF-PYPSGALHMGHLRNYSIGDLMARFLRMNGY 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|229825724|ref|ZP_04451793.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC
           49176]
 gi|229790287|gb|EEP26401.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC
           49176]
          Length = 686

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 115/358 (32%), Gaps = 63/358 (17%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    ++ D +A      GY+V  +   ++ G +I T A+             
Sbjct: 17  SGKPHIGNTYEIILADAIARFKRKEGYDVRFQTGTDEHGQKIETRAIEA----------- 65

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 G  P  ++  V +E+   +  +L N   ++++    +   + + KI +      
Sbjct: 66  ------GQTPKEFVDSVAREVKRLW--DLCNTSYDRFIRTTDEDHEKQVQKIFKKLYDKG 117

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +I    +      +  +             +     G + P + +            L  
Sbjct: 118 DIYKGAYKG---MYCTECEAFYTNSQLADGKCPECHGEVHPAEEEAYFFKMSKYADRLIE 174

Query: 313 STMVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERG----FD--NMIYVM------ 356
                 D  RP+ + +     F      DL   +  ++ G    FD  +++YV       
Sbjct: 175 HINNNPDFIRPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDSKHVVYVWLDALSN 234

Query: 357 -------GSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------GMP- 397
                   +D      Y K   A    + +   + + +   +  +  D        G P 
Sbjct: 235 YITGLGYDADGNYGDLYKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPW 294

Query: 398 -----IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDFCKVKEQSKEN 449
                 KMSK  G+ I    +    G D+VR+ +L     E      +  + E+   +
Sbjct: 295 LLQGGEKMSKSKGNVIYADDMASLFGVDAVRYFVLHEMPYENDGVITWELMAERYNSD 352


>gi|221211478|ref|ZP_03584457.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168839|gb|EEE01307.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 945

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 99/313 (31%), Gaps = 49/313 (15%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEKSGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ----LIVHLAEY 505
                   Y R R+  R       D D+      V  +  E D   +     L   L  Y
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAQHAVPV-DEWLEIDRYAVAFSAQLQTELLAY 722

Query: 506 PRVIENATIAQEPYKLA----FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                      E + +      Y    +    G +    ++ RL     ++R     +  
Sbjct: 723 -------YEKYEFHPVVAKLQTYC---SEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTA 771

Query: 562 LVHAVA---SIIN 571
           L H       ++ 
Sbjct: 772 LYHLTQGLLRVLA 784


>gi|213419116|ref|ZP_03352182.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 303

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|213161212|ref|ZP_03346922.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
          Length = 813

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|268554035|ref|XP_002635005.1| C. briggsae CBR-ERS-3 protein [Caenorhabditis briggsae]
          Length = 467

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 63/396 (15%), Positives = 130/396 (32%), Gaps = 68/396 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D    I            + 
Sbjct: 8   APSPTGHLHIGGLRTALFNYLFA---KKHGGDFVLRIEDTDRARFIYEALHYYKLTPDEP 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               +    E      + +     L D        F  E  L +++  + +         
Sbjct: 65  REGGNYGPYEQSKRLDHYQQAAHHLIDS-GHAYRCFCPEHRLELLRKTAEK--------- 114

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                             RG+         +L  +       +         +  +D++ 
Sbjct: 115 ------------------RGEIPKYDRKCAHLTLEN---AKAMADNGESFVVRFKLDKQN 153

Query: 309 LLFRSTMVG------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           + F+  + G      D+ D  LLKSDG  TY    LA      +    ++I   G +   
Sbjct: 154 VQFQDEVFGTVNQCIDESDPVLLKSDGFPTYH---LANVIDDRKMDISHVIR--GMEWLS 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--D 420
              + + +  A +    +        + L       K+SKR  D   + +  D++G+  +
Sbjct: 209 STGKHQILYRAFNWTPPKFVH-----LSLIMRTATKKLSKRDKDA-FVAYYSDQLGALPE 262

Query: 421 SVRFMMLWRKNSELLDFDFC------KVKEQSKENPVFY--VQYAYARCRSIFRQAKDIF 472
           +V  +M+ R  S + DFD        ++K+Q   + +    +   +   +   R A   F
Sbjct: 263 AVLNLMI-RNGSGIRDFDADHFYSLQEMKDQFDLSLLGRRNLLLDHDSLQKYSRMA---F 318

Query: 473 PDLDFDLFPR---NVIPQESEFDTSELQLIVHLAEY 505
              DF+       +++ ++ +F+  E + I  +  +
Sbjct: 319 KSADFEFLYPRIVDLLKKDRKFEIPEKEHIRRIVSF 354


>gi|33241293|ref|NP_876235.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|81663879|sp|Q7V9I9|SYV_PROMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33238823|gb|AAQ00888.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 933

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 85/238 (35%), Gaps = 31/238 (13%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
               +   F  ++W  + +D+        I   L     +   +    + +         
Sbjct: 392 HLGKDEPRFYPDRWAKVYRDWLTGIRDWCISRQLW-WGHRIPAWFVVSETNNELTDDTPY 450

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           I+  L+ +    + +L   K   T      D D     F S +             G   
Sbjct: 451 IVA-LSEK----DALLEAQKKYGTDAVLRQDEDVLDTWFSSGLWPFSTL-------GWPD 498

Query: 333 YFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
              ADL+  Y       GFD +I+         V R+  +A A + K    +V +  LV 
Sbjct: 499 KTNADLSRWYPTNTLVTGFD-IIFFW-------VARMTMMAGAFTGKMPFADVYIHGLV- 549

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--KNSELLDFDFCKVKEQS 446
             RD    KMSK AG+ I    ++D  G+D++RF ++       + +  D+ + K+ S
Sbjct: 550 --RDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVKEVAGAGQDIRIDYDRAKDTS 605



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 52/190 (27%), Gaps = 33/190 (17%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
              I      +  +   +G   ++     N TG +H+GH     + DT+       G  V
Sbjct: 30  WQKIWEEEGAFHPDPNDEGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNV 89

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                                             LP   +  + ++ + ++   K     
Sbjct: 90  LC--------------------------------LPGTDHASIAVQTILEKQLKKEGLTR 117

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                  +L     +  ++  + I + L+ L    D               + +    L 
Sbjct: 118 DELGRSAFLERAWAWKSESGGR-IVEQLRRLGYSVDWKRERFTMDTRLSKAVSEAFVRLH 176

Query: 282 RQGYVYEGIL 291
           +QG +Y G  
Sbjct: 177 QQGLIYRGEY 186


>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 474

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 122/411 (29%), Gaps = 76/411 (18%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D   +I         R  Q    +  +L
Sbjct: 36  HLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTDIDDKI--------IRRAQETGEDPKEL 87

Query: 197 PEGY--YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
            E +  Y    +K +  + AD Y     +  +                           I
Sbjct: 88  AEKFLKYFLEDMKALKVKPADIYPRVTEHIED--------------------------II 121

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMDRKQL 309
                + E  +       +   +      G +      E            K + +   L
Sbjct: 122 DFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEGKRNPEDFAL 181

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYV 364
             ++       D P    +G   +               FD  I+  G+D     H   +
Sbjct: 182 WKKAKPGEPKWDSPW--GEGRPGWHIECSTMSTKYLGEQFD--IHGGGNDLIFPHHENEI 237

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + EA        K  +   L     + +     KMSK  G+F+T+R ++     + +RF
Sbjct: 238 AQTEAC-----TGKEWVRYWLHTGFVMVKG---EKMSKSLGNFVTIRELLQRYSPEVIRF 289

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L +     LD+    +  Q  +N +  +       R    +A+  F     +     V
Sbjct: 290 FVLQKHYRSPLDYTEEGI--QHAKNNLEKLYNTIENIRIALEKAEIPFKWSKEEFELYEV 347

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           I +        +       ++     N   A +P      ++++A+  + +
Sbjct: 348 IREAKRKFYEAMD-----DDF-----NTAEAMKP------IFEVANAVNKY 382


>gi|298528228|ref|ZP_07015632.1| glutamyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511880|gb|EFI35782.1| glutamyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 463

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 95/291 (32%), Gaps = 59/291 (20%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINT 176
             +   + +PTG +H+G  R A+    LA       L+     +V R             
Sbjct: 3   KVVARFAPSPTGYLHIGGARTALFNWLLARGSGGRFLLRIEDTDVERSS----------- 51

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
                     QA+ ++   L   Y    Y +    E+  +Y  +L+      +       
Sbjct: 52  ------QEMTQAILDSMHWLGLDYDQEPYYQSKRFEVYKEYIQKLVRTGHAYYCR----- 100

Query: 237 SVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
                ++ +R+  +AL    ++     E     G  + IR                L  P
Sbjct: 101 CTPEEVEEMREKARALGQKPKYSGKCREACLQPGPDTVIR----------------LKAP 144

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           ++  T   D  +  +   +T +    D  L + DG+ TY  A +A      E G  +++ 
Sbjct: 145 QAGQTVYQDQVKGSIAVDNTQLD---DLVLERMDGTPTYNLAVVA---DDIEMGITHVLR 198

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             G DH     R   +  A+      +       V +       K+SKR G
Sbjct: 199 --GDDHINNTPRQLLIYQAL-----DVTPPFFGHVPMILGPDKKKLSKRHG 242


>gi|206895183|ref|YP_002246881.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737800|gb|ACI16878.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 866

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 91/247 (36%), Gaps = 30/247 (12%)

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V   L+D++  +L    +E    +V+   VQ + +      +        +        G
Sbjct: 353 VEPMLSDQWFVKLTAMADEA-KRVVETGEVQIIPERWIKVYQDWMDNIRDWCISRQIWWG 411

Query: 269 DPSPIRDIIDNLARQGYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
              P+          GYV+    E +   PK     K + D     F S++   +V    
Sbjct: 412 HRIPVYTC----EECGYVFASEEETVEQCPKCGGPVKQEDDVLDTWFSSSLWPFEV---- 463

Query: 325 LKSDGSYTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382
                 +     DL Y+        G+D +++         V R+  +A  ++ +     
Sbjct: 464 ----FGWPEETEDLKYYYPTSLLITGYD-ILFFW-------VARMIFMATTLTGQIPFEE 511

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V L  LV    D    KMSK  G+ +    ++DE  +D++R+ ++   +    D +F + 
Sbjct: 512 VFLHGLV---LDEHGQKMSKSKGNTVDPMDMIDEYSADALRYALVSAMSLGGQDVNFSES 568

Query: 443 KEQSKEN 449
           + +  +N
Sbjct: 569 RVEHGKN 575


>gi|312793533|ref|YP_004026456.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180673|gb|ADQ40843.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 920

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 25/182 (13%)

Query: 354 YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     A A   +     VL    V    DG   KMSK  G+ I+   
Sbjct: 558 YLEGNDQYRGWFQSSLLTAVATKGRAPYRIVLTHGFVV---DGEGKKMSKSEGNVISPFD 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++E G+D +R   +    +  +      +K+ ++          Y + R+  R      
Sbjct: 615 IINEFGADILRLWCVSADYTTDMRISKEIIKQLTEI---------YRKIRNTARFLLGNL 665

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLAS 530
            D +      + +  E   +     L   L      +  A           Y  +Y L  
Sbjct: 666 YDFN---PKTDKVGYEDLKEIDRWAL-QRLYMLIEKVTKAYEEY------DYNQVYHLVH 715

Query: 531 VF 532
            F
Sbjct: 716 NF 717


>gi|241888786|ref|ZP_04776092.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864462|gb|EER68838.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 465

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 69/460 (15%), Positives = 140/460 (30%), Gaps = 80/460 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V D +   +  SGYEV       D   +I   +        +
Sbjct: 28  CGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYEVDFISNFTDVDDKIIKASNEEGISTSE 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 +   + Y      +        +Y  E++NF       +V++            
Sbjct: 88  LTEKYITAFFKDYDALGCKRATKNPRVTEYMQEIINFIA----KLVEEGFA--------- 134

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +A    +     ++D+ +     I D+I                       K D    
Sbjct: 135 -YEAKGDVYFRTRKKEDYGKLSKQSIDDLI-------------SGARIEVGEHKEDPLDF 180

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P    +G   +    +       E   D  I +            
Sbjct: 181 ALWKKAKPGEVKWDSP--FGEGRPGWH---IECSVMAKETLGDT-IDIHAGGQDLTFPHH 234

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A  SE    +      +   + +   +KMSK  G+F  ++ ++ E+    +R  ML
Sbjct: 235 ENEIAQ-SECHNHVPFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIAEIDPMVLRLFML 293

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  +++    + E +K N               F + K  + +L F L        
Sbjct: 294 TVHYRTPINYTLENI-ELAKTN---------------FEKIKTSYQNLQFRLNNDM---S 334

Query: 488 ESEFDTSELQLIV-HLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENP 543
           + + DT  + L+   L ++                  Y+ D    A+     +   R + 
Sbjct: 335 DEKLDTDVVALVTEELNKFEE----------------YMQDDFNTANALSSWYEIVRISN 378

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                +A N++     L+L++A     +   +I+G+    
Sbjct: 379 SYTAKEAVNKET----LELINAAFETYS---SILGISVKE 411


>gi|311741282|ref|ZP_07715106.1| valine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303452|gb|EFQ79531.1| valine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 913

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 109/350 (31%), Gaps = 48/350 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    V    +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 31  PQAVEKDLYEGWVEKGYFTPDANSEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 90

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++   + +  L   +                     
Sbjct: 91  RMQGYATL-------WLPGADHAGIATQTKVEAKLKETE--------------------- 122

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                +  ++  E+++  V ++  Q     I++ ++A+    D          G    ++
Sbjct: 123 ---GKKRWDYEREEFIDKVWEWKEQYG-GTIQNQMRAIGDSVDWSRERFTLDDGLSRAVQ 178

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPLL 325
            I  NL  +G +Y+       S   +           D++ + +  R   + DD    ++
Sbjct: 179 TIFKNLYDEGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHLIV 238

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
            +    T    D+A      +  + ++   +G +   +  R +     +++    +    
Sbjct: 239 ATTRVET-MLGDVAIAVHPDDERYADL---VGKE-LPHPFRDDLKLKIIADDYVDMEFGT 293

Query: 386 CEL-VRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVRFMMLWRKNSE 433
             + +    D     M  R   +  T+      + +   RF  L R+ + 
Sbjct: 294 GAVKITPAHDPNDYAMGTRHNLEMPTVIDTTGHIANTGTRFDGLTREEAR 343


>gi|150396370|ref|YP_001326837.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027885|gb|ABR60002.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 947

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 32/199 (16%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D +       G +V  +  
Sbjct: 22  ADAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDLMVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +                               V ++L ++          
Sbjct: 82  MDHAGIATQMV-------------------------------VERQLRERQLPGRREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  V ++  ++   +I + LK L    D          G    + ++  +L ++G +
Sbjct: 111 EAFIEKVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSDAVIEVFVSLYKEGLI 169

Query: 287 YEGILPPPKSKTTQKCDMD 305
           Y            Q    D
Sbjct: 170 YRDKRLVNWDPKLQTAISD 188



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 98/341 (28%), Gaps = 55/341 (16%)

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK-- 250
           +  L E +Y  V  K + K           NF  + W     ++        I   L   
Sbjct: 392 EPRLTEQWY--VDAKTLAKPAIAAVKEGRTNFVPKNWEKTYFEWMENIQPWCISRQLWWG 449

Query: 251 ----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
               A          E        + I+  I +        E +L   K       D D 
Sbjct: 450 HQIPAWYGPDGQIFVERTEEEALHAAIQHYIAHEGPMKAYVEDLLENFKPGEILTRDEDV 509

Query: 307 KQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH- 360
               F S     + +G   + P L           D  Y       GFD +I+   +   
Sbjct: 510 LDTWFSSALWPFSTLGWPKETPEL-----------DKYYQTDVLVTGFD-IIFFWVARMM 557

Query: 361 --SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
               +  +      A        + +      L RD    KMSK  G+ I    ++DE G
Sbjct: 558 MMGLHFMK-----DADGTPVEPFHTVYVHA--LVRDKNGQKMSKSKGNVIDPLELIDEYG 610

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKE---NPVFYVQYAYARCRSIFRQAKDIFPDL 475
           +D++R             F    +  Q ++   +P     Y   R           F ++
Sbjct: 611 ADALR-------------FTLAIMAAQGRDVKLDPARIAGY---RNFGTKLWNATRFAEM 654

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +        IP+ +   T+   ++  L+   R +  A    
Sbjct: 655 NGATSSEGFIPEAASLTTNRW-ILTELSRTIRDVSEAIEDY 694


>gi|157164836|ref|YP_001467047.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|189082987|sp|A7ZE39|SYL_CAMC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112800438|gb|EAT97782.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 821

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 26/64 (40%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K    I     E+         K  I  +   P+G +H+GH R   +GD LA     S
Sbjct: 12  IEKKWQEIWDKNEEFEPKDDLSLPKKYILSMFPYPSGRIHMGHVRNYSIGDALARSYRKS 71

Query: 158 GYEV 161
           GY V
Sbjct: 72  GYNV 75


>gi|317495329|ref|ZP_07953699.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914751|gb|EFV36227.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 910

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 93/302 (30%), Gaps = 59/302 (19%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +  + EG   P         +MD   + F S               G+          
Sbjct: 499 EAKELLPEGYTHPGSPNGEFTKEMDIMDVWFDS---------------GTSH---QGCCA 540

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            +       D  +Y+ GSD   G+       + AVS       ++    V    DG   K
Sbjct: 541 VRDDLTYPAD--LYLEGSDQYRGWFNSSLITSVAVSGVAPYKELVSAGFVM---DGNGNK 595

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I+   V  ++G++ +R        ++ +      +K+ S+          Y 
Sbjct: 596 MSKSLGNVISPNDVGKQLGAEIIRLWSASVDYTQDVRISNDILKQVSE---------TYR 646

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           + R+ +R       +  FD     V   + E           + ++ +V+ N     E  
Sbjct: 647 KIRNTYRFLLGNLFNGSFDNRKDLVEYADLEELDK-----YMMIKFEKVVANVLDYYE-- 699

Query: 520 KLAFYLY-----DLASVFH----GHWSHGRENPRLRFVQANNRKLTMMRLQ-----LVHA 565
               Y +     +L + F+      +        + +++  +       L      L  +
Sbjct: 700 ---NYQFNSITSELTNFFNVELSSFY--LDYGKDILYIEGEDSPKRRSMLTVLYTILSKS 754

Query: 566 VA 567
           V 
Sbjct: 755 VR 756


>gi|298386160|ref|ZP_06995717.1| glutamate--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261388|gb|EFI04255.1| glutamate--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 504

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 99/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL+  ++ ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGEHGPYRQSERREIYKKYVQILLDN-DKAYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMSKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|261884138|ref|ZP_06008177.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 88

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +G    ++      K  +      P+G +H+GH R   +GD L+      G
Sbjct: 10  YKWQQIWKKNGYSEPKDDYSLPKKYILSMF-PYPSGRLHMGHVRNYSIGDALSRYYRNRG 68

Query: 159 YEV 161
           Y V
Sbjct: 69  YNV 71


>gi|217034230|ref|ZP_03439648.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10]
 gi|216943290|gb|EEC22752.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10]
          Length = 872

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 100/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPL------LKSDGSYTY 333
               K        R + LF  + +             G  V  PL      + +D    +
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLINRKIPIIAD---LH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
              +      K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|167753124|ref|ZP_02425251.1| hypothetical protein ALIPUT_01395 [Alistipes putredinis DSM 17216]
 gi|167659438|gb|EDS03568.1| hypothetical protein ALIPUT_01395 [Alistipes putredinis DSM 17216]
          Length = 1132

 Score = 46.1 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 82/238 (34%), Gaps = 39/238 (16%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
                 I+ +ED         + +++  + +   V   ++     K  +  D+ ++   +
Sbjct: 514 WGTPLPIWATEDYSEMKCIGSVEELVAEIEKS--VAASLMKENPYKNFKPGDLSKEN--Y 569

Query: 312 RSTMVGDDVD----RPLLKSDGSYTYFAADL------------AYFKCKYERGFD--NMI 353
            +  +           L+ S G       DL            A     +E G D    +
Sbjct: 570 STDRIDLHRPYVDNIVLVSSKGEPMRREPDLIDVWFDSGAMPYAQLHYPFEHGGDYFKSV 629

Query: 354 Y-----VMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           Y       G D   G+   L A+A  +         ++   + L ++G   KMSKR G+ 
Sbjct: 630 YPADFIAEGVDQTRGWFFTLHAIATML-FDSVAFKNIISNGLVLDKNG--NKMSKRLGNA 686

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           +    ++   G+D+ R+ M+      + L FD   V E  ++          F+  YA
Sbjct: 687 VDPFEILSTYGADATRWYMISNSQPWDNLKFDRDGVDEVRRKFFGTLYNTYSFFALYA 744


>gi|312385678|gb|EFR30111.1| hypothetical protein AND_00481 [Anopheles darlingi]
          Length = 1036

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 58/216 (26%), Gaps = 36/216 (16%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           SP Y+     S          EYGR L     +  +     N TG +H+GH     + D 
Sbjct: 81  SPQYVEAAWYSWWEKEGFFKPEYGRKLNNPKGQFVMVIPPPNVTGSLHLGHALTNAIEDA 140

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +       G         + AG     +     WR QQ                      
Sbjct: 141 ITRWHRMKGRTTLWVPGCDHAGIATQVVVEKKLWREQQ---------------------- 178

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                        +   EK++  +  +  +   +I    LK L    D   +        
Sbjct: 179 ---------QTRHDLGREKFIEKIWQWRNEKGDRIYHQ-LKKLGSSFDWDRACFTMDPKL 228

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              + +    +  +G +Y        S T +    D
Sbjct: 229 CKAVTEAFVRMHEKGLIYRSSRLVNWSCTLRSAISD 264


>gi|170738987|ref|YP_001767642.1| glutamyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|238688009|sp|B0UQ09|SYE1_METS4 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|168193261|gb|ACA15208.1| glutamyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 474

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 56/303 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A                         + L +  
Sbjct: 4   VVTRFAPSPTGFLHIGGGRTALFNWLYAR-------------------KHGGRMLLRIED 44

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--- 240
             ++       +        + L   G  +     +       E  L   + Y   A   
Sbjct: 45  TDRERSTEAAIEAILDGLSWLGLDWDGDVIYQFARAARHREVAEGLLAAGRAYRCYASPE 104

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +R+  +             D +  +  P    +  L            P + +T  
Sbjct: 105 ELTEMREAARREGRPLRYDGRWRDRNPSEAPPGVRPVIRLRA----------PVEGETVV 154

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           + ++  + +        D  D  LL+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 155 EDEVQGRVVW----QNKDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R   +  A+        V     + L       K+SKR G           +G D
Sbjct: 206 LTNAARQTQIYHALGW-----TVPSMSHIPLIHGPDGAKLSKRHG----------ALGVD 250

Query: 421 SVR 423
           + R
Sbjct: 251 AYR 253


>gi|72080730|ref|YP_287788.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71913854|gb|AAZ53765.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 513

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 144/440 (32%), Gaps = 55/440 (12%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-AGAQINTLALSVFWRYQQALYN 191
           +G +H+GH    V+   + +    SG+E  R +  +D  G +I+ LA       Q+ +  
Sbjct: 15  SGRLHIGHLYTTVLAWVIRNFKKMSGFEA-RLFTGSDEHGQKISQLAAKANLEPQEFVDK 73

Query: 192 NDSDLP----EGYYPGVYLK---------HVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           N  +      +      Y +          + K     Y    +   E + L  + D   
Sbjct: 74  NVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEYQGLYSISDEEF 133

Query: 239 QAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPP 294
            +  + +  +      ++      ISE  +        + + D L     ++++  +   
Sbjct: 134 LSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENPKFIFDSKIANE 193

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR--------PLLKSDGSYTYFAADLAYFKCKYE 346
             +   +  ++   +  ++   G  +D+          L +  SY     D    +   +
Sbjct: 194 LRQNFLQRGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVFKDQIDLENPKK 253

Query: 347 RGF----DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             F      +I V+G +    + R   +   +  K     +    L   +      KMSK
Sbjct: 254 SNFWTDSAQIIQVVGKE----IARFHCIYWPIFLKSLNFRLPSIILTHGWLITPEGKMSK 309

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ I    ++ +   + ++F  + + N++  D  F +   ++  N  F   +     R
Sbjct: 310 SKGNVINPLDLLKKFDPEIIKFYFVSQINTKN-DSVFDENLLENFYNSFFVNTFGNLISR 368

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR-----VIENATIAQE 517
           +I      I    D  L         ++    E  L+  L E+        IE A     
Sbjct: 369 TI----ALIVKKFDQPLLFEIADLDWTDISFYEKILL-SLDEFCDNFDQLEIEKAFKT-- 421

Query: 518 PYKLAFYLYDLASVFHGHWS 537
                  + +L    +G + 
Sbjct: 422 -------VIELTKNLNGFFD 434


>gi|50556490|ref|XP_505653.1| YALI0F20218p [Yarrowia lipolytica]
 gi|49651523|emb|CAG78462.1| YALI0F20218p [Yarrowia lipolytica]
          Length = 1047

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 37/201 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTK-----VNIEFVSANPTGPMHVGHCRCAVVGD 148
           +P+ +             +   L   G+        I     N TG +H+GH     + D
Sbjct: 92  NPATIESSWYEWWEKQGYFEPELKADGSPKDKGLYVIPIPPPNVTGALHIGHGLTVALQD 151

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G  V      + AG    ++   + W                         
Sbjct: 152 GLIRFHRMKGKTVLYVPGFDHAGISTQSVVEKMLW------------------------- 186

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                  K      +   EK+  +V ++     ++ I++ LK L   +D         + 
Sbjct: 187 ------AKEKKTRHDLGREKFTDLVWEWKEDYHVR-IKNQLKKLGASYDWSREAFTLDQP 239

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               + +    L  +G +Y  
Sbjct: 240 RTKAVNEAFCRLHEEGVIYRA 260


>gi|253581993|ref|ZP_04859217.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836342|gb|EES64879.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 933

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 104/305 (34%), Gaps = 44/305 (14%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISED 263
            V  E +D     L      +++P      + +M++   D      +   +   +F +E 
Sbjct: 416 FVNVEGSDIREKALKALDNVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFFNEA 475

Query: 264 D----FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
           +    F++   + I +I+       ++          +  +K  +   +L   + ++   
Sbjct: 476 NGKEIFNKEILARIVEIVKKEGTAAWLKYSAEELIGDELMEKYGLKGLELRKETNIMDVW 535

Query: 320 VD-----RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAA 373
            D     R +L++ G   +  AD+               Y+ GSD   G+ +     +  
Sbjct: 536 FDSGVSHRAVLETRGDLLHRPADM---------------YLEGSDQHRGWFQTSLLTSIG 580

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            +       +L    V    DG   KMSK  G+ +    V+   G+D +R         E
Sbjct: 581 STHDAPFKKILTHGFVN---DGEGKKMSKSVGNTVVPADVIKLYGADILRLWCASVDYRE 637

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            +      +K+ ++         AY R R+  R       D D +    + +P +   + 
Sbjct: 638 DVKISDNILKQMAE---------AYRRVRNTARYILGNSNDFDPN---TDKVPYDKLMEI 685

Query: 494 SELQL 498
            +  L
Sbjct: 686 DKWAL 690


>gi|255531150|ref|YP_003091522.1| valyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344134|gb|ACU03460.1| valyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 887

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 69/244 (28%), Gaps = 34/244 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+       S  +S  ++  +   +     I     N TG +H+GH     + D L   
Sbjct: 8   DPAATEDKWYSYWLSK-KFFHSEPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRK 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G         + A   I T A  V    ++ +   D           +LK+   E 
Sbjct: 67  ARMQGKNACWVPGTDHA--SIATEAKVVAMLKERGINKADIS------REEFLKY-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II D LK L    D   +           +
Sbjct: 118 KEKYG------------------------GIILDQLKKLGASCDWDRTRFTMEDDLSDAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            D   +L ++G++Y GI         +    D + +          +   +  SD   T 
Sbjct: 154 IDSFIHLYKKGWIYRGIRMVNWDPAGKTAVSDEEVIRKEVNQKLYYIKYTVSGSDDFITI 213

Query: 334 FAAD 337
               
Sbjct: 214 ATTR 217


>gi|163851006|ref|YP_001639049.1| leucyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163662611|gb|ABY29978.1| leucyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 901

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   + +   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 47  AKDAEPRWQQAWDAAKLFETKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARY 105

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 106 KRAKGHNV 113


>gi|90101538|sp|Q6YRJ6|SYV_ONYPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 882

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 58/191 (30%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                   +    +  N         +     N TG +H+GH     + D +       G
Sbjct: 11  EHQRYQQWLEKKYFCANPNANKKTFTVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQG 70

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           ++V   +        ++   ++   + ++ L             G+  K + KE+  KY+
Sbjct: 71  FDVL--FLPG-----MDHAGIATQNKVKEQLKQE----------GLLTKTLSKEIFLKYA 113

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +             K+   Q     IR   + L +  D    +          ++++  
Sbjct: 114 WQ------------WKEEHAQN----IRQQWQVLGLHLDYNFEKFTLDPDLSQQVQEVFG 157

Query: 279 NLARQGYVYEG 289
            L ++  +Y  
Sbjct: 158 KLFQKKLIYRD 168


>gi|16125569|ref|NP_420133.1| valyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234318|ref|YP_002516754.1| valyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81535578|sp|Q9A8N3|SYV_CAUCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13422663|gb|AAK23301.1| valyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220963490|gb|ACL94846.1| valyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 906

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 57/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L +   +   +            I     N TG +H+GH     + D L 
Sbjct: 5   TFDPQSVEPRLYAAWEASGAFKPAEDPNAEPFVIVIPPPNVTGSLHIGHALNNTLQDVLT 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V +
Sbjct: 65  RFHRMRGKAALWLPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA   +    +   E ++  V ++  ++    I + L+ L    D          G  +
Sbjct: 94  QLAAAGNIGRRDMGREAFVDKVWEWKAESG-GAITNQLRRLGASCDWSRERFTLDEGLSA 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L +Q  +Y            Q    D +
Sbjct: 153 AVRKVFVQLYKQNLLYRDKRLVNWDPQFQTAISDLE 188



 Score = 38.7 bits (89), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +      +     V +  LV   RD    KMSK  G+
Sbjct: 507 TGFD-IIFFW-------VARMMMMGIHFMGEAPFKQVFINALV---RDEKGAKMSKSKGN 555

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE+G D+VRF +
Sbjct: 556 VMDPLILIDELGCDAVRFTL 575


>gi|298207085|ref|YP_003715264.1| isoleucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849719|gb|EAP87587.1| isoleucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 1134

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 12/148 (8%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +A  + +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 642 GVDQTRGWFYTLHTIATMIFDDVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFETLS 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G D+ R+ M+   N  + L FD   ++E + K     Y  Y++         A     
Sbjct: 699 VYGPDATRWYMISNANPWDNLKFDIEGIEEVRRKFFGTLYNTYSFFSLY-----ANLDGF 753

Query: 474 DLDFDLFPRNVIPQESEFDTSEL-QLIV 500
             D +  P    P+   +  SEL  LI 
Sbjct: 754 TYDENPIPLEQRPEIDRWILSELHSLIK 781


>gi|330834208|ref|YP_004408936.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566347|gb|AEB94452.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 952

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 76/244 (31%), Gaps = 48/244 (19%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N  +S  +          + I        K     + F   N   P H+GH R  V G
Sbjct: 13  FLN-DISKKWQEAW----AKNKIFEADPRDQKKFFTTVAFPYPN--SPFHLGHGRTYVTG 65

Query: 148 DTLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D  A  M   GY V     ++    G  I T+A  +    ++ L     D+ +  Y    
Sbjct: 66  DVYARYMRMKGYNVLFPMGFHF--TGTPIITMADDISKGDKELL-----DIFQNIY---- 114

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              +  E+  K S  L              +      + I+  ++ + +  D        
Sbjct: 115 --EIPSEVLPKLSDPL--------------FMANYFKEEIKAAMREIGLSIDWRREFTTI 158

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPP------------PKSKTTQKCDMDRKQLLFRS 313
                S I      L  +G+V +   P               +K   + ++    ++F  
Sbjct: 159 DPHFSSFIIWQFSKLQERGFVVKDTHPVGWCPVHNLPVGMHDTKGDMEPEIGEYVVIFFE 218

Query: 314 TMVG 317
           T +G
Sbjct: 219 TKLG 222


>gi|238879772|gb|EEQ43410.1| hypothetical protein CAWG_01647 [Candida albicans WO-1]
          Length = 509

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 136/405 (33%), Gaps = 72/405 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       ++     +  R       GA+ + +  ++ 
Sbjct: 45  APSPTGFLHLGSLRTALYNYLLAKSTGGEFILRIEDTDKNRLVP----GAE-DNIINTLK 99

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W             P G Y     KH+      KY++ELL+          K Y  +  +
Sbjct: 100 WCNLHIDEGPVEGGPYGPYRQSDRKHI----YQKYANELLSKGL-----AYKCYCSKERL 150

Query: 243 KIIRDDLKAL----NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +R+  + L    N+ +D     +  H G P  IR       +    Y         + 
Sbjct: 151 LELRESAQRLKPPTNVTYDRKCISESEHEGLPYVIR------FKSPNNYPPFRDLLHGEL 204

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
           + +   + K   F         D  ++K+DG  TY  A++       +     + +V+ G
Sbjct: 205 SLQPQYNDKDRRFD--------DFVIVKNDGMPTYHFANV------IDDHLMKITHVVRG 250

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------I 408
            +      +  A+  A+  +  Q        + L       K+SKR+GD          I
Sbjct: 251 EEWLPSTPKHIAMYHAMGWEPPQYIH-----IPLLTSLKDKKLSKRSGDLNILKLKDERI 305

Query: 409 TLRHVVDEVG--------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
               +V+ V         S+  +F  +   +  +  F   ++ + + +     + Y    
Sbjct: 306 LPEALVNFVALFGWSPVRSNGEKFNEVMDLSDIIELFSIDQLTKGNAKVNDSKLYY---- 361

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
             +    AK +      +       P   +F     + +  L ++
Sbjct: 362 -FNKLHLAKKLESAEGLETLVEEYYPHFKQFSNQSKEYLYKLLKF 405


>gi|227544157|ref|ZP_03974206.1| glutamate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909725|ref|ZP_07127186.1| glutamate--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185873|gb|EEI65944.1| glutamate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300893590|gb|EFK86949.1| glutamate--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 501

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 42/299 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
            KV + + + +PTG +H+G+ + A+     A       ++     +  R     +A  + 
Sbjct: 3   QKVRVRY-APSPTGFLHIGNAQSALFNYLFARHFDGTMVLRIEDTDTKRNVEDGEASQRE 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           N   L + W       N  +     Y      K     +  KY  ELL+          K
Sbjct: 62  NLHWLGIDW---DEGPNKPNPKYAPYRQSERNKEG---IYHKYIQELLDKGI-----AYK 110

Query: 235 DYSVQAMMKIIRDDLKALNI--QHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           DYS +  +  +R+  KA N    +D  +  + +  +               +G       
Sbjct: 111 DYSTEEELAEMRERQKANNEPPHYDGRWYGKSEEEQKAA----------EAKGLKPTIRF 160

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK    +  D+ R  + F S  +G D    + KSDG  TY   + A     +     +
Sbjct: 161 HFPKDHDYEWDDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDITH 215

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++   G+DH     +  A+  A+         +      ++      K+SKR  D +  
Sbjct: 216 VLR--GADHISNTPKQIAIYEALGWDHPTFCHIPL----IFNPKTRKKLSKRDKDTLQF 268


>gi|188580913|ref|YP_001924358.1| leucyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179344411|gb|ACB79823.1| leucyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 875

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   + +   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 21  AKDAEPRWQQAWDAAKLFETKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARY 79

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 80  KRAKGHNV 87


>gi|88608680|ref|YP_506613.1| glutamyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|115305779|sp|Q2GD33|SYE2_NEOSM RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|88600849|gb|ABD46317.1| glutamyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 409

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A ++ I   LK L++ +D  +    +   + +  R++   L  +G  Y            
Sbjct: 52  AYLESILQALKWLSLSYDELV----YQSVNVNRHREVALELLNRGKAYHDNGAVRLKVNH 107

Query: 300 QKCDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +       +L   +  GD + D  +L+SDGS TY    LA     ++ G  ++I   GS
Sbjct: 108 DETVKFSDLILGEISADGDSINDVVILRSDGSPTYM---LAVVVDDHDMGITHIIR--GS 162

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           DH +    + + +   +              + L  +    K+SKR G  
Sbjct: 163 DHITNTFAQ-KLIYEGMGWSLPDFAH-----IPLIHNTHGAKLSKRDGAV 206


>gi|126461476|ref|YP_001042590.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|229470570|sp|A3PHK2|SYE1_RHOS1 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|126103140|gb|ABN75818.1| glutamyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 471

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 96/292 (32%), Gaps = 45/292 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+                    ++   G +  T  L +
Sbjct: 7   KPVVTRFAPSPTGYLHIGGGRTALF------------------NWLYARGRK-GTFLLRI 47

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++      +D        + L   G+ ++     +       + L     Y   + 
Sbjct: 48  EDTDRERSTPEATDAILRGLTWLGLDWDGEVVSQFARKDRHAEVAREMLARGAAYKCFST 107

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSKTT 299
            + I    +A   +    +    +   DP+   D   +  +             P+S  T
Sbjct: 108 QEEIEAFREAARAEGRSTLFRSPWRDADPTSHPDAPFVIRMKA-----------PRSGET 156

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  +  + F++  +    D  +L+SDG+ TY    LA     ++ G  ++I   G D
Sbjct: 157 VIEDEVQGTVRFQNETLD---DMVVLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDD 208

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           H     R   V  A+  +     V +   + L       K+SKR G      
Sbjct: 209 HLNNAARQTMVYEAMGWE-----VPVWAHIPLIHGPDGKKLSKRHGALGVEE 255


>gi|315222780|ref|ZP_07864667.1| glutamyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188143|gb|EFU21871.1| glutamyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 479

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 98/298 (32%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 4   APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 57

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y  ++ + L    + +     EE      +
Sbjct: 58  -----RWLGIDWDESPETHEKYRQSERLDIYQGYINELLEKGLAYKSYVTEEELATERER 112

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G V    L   
Sbjct: 113 QEAAGETPRYINEYLGMSEDEKAAYIAERE-----------------AAGIVPTVRLAVN 155

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  D+ + ++ F    +G   D  + K DG  TY   + A     +     ++I 
Sbjct: 156 ESGIYKWNDLVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHLMKISHVIR 210

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 211 --GDDHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 262


>gi|307298183|ref|ZP_07577987.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916269|gb|EFN46652.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 462

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 65/314 (20%), Positives = 110/314 (35%), Gaps = 39/314 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  DTL  +  F+GY+V     I D G             +     +   D 
Sbjct: 38  HIGNLRAYVFADTLKRMFLFNGYKVRHVMNITDVG-------------HLTGDEDEGEDK 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALNI 254
            E             E+ D Y+       E     LP V   + + +  +I D ++ +  
Sbjct: 85  MEAGARRE--GKTVWEIVDFYTKAFFKDLERLRIILPTVTCRATEHVQDMI-DMIQKIEA 141

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
               +I+  + +  D S + D    LAR     E I    ++   +K   D   L F   
Sbjct: 142 NGYTYIAGGNVYF-DTSKVPD-YGKLARLQLDEEKIRSRVENDPFKKNPFDFV-LWFTRY 198

Query: 315 MVGDDV---DRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSG--YVKRL 367
              +     D P  +    +    + +A  Y   +++      I+  G DH    +   +
Sbjct: 199 KYENHAMQWDSPWGRGFPGWHIECSAMASKYLGERFD------IHTGGIDHIPVHHTNEI 252

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMM 426
               AA   +     +    LV     G   KMSK  G+FITL+ ++D     +  R+ +
Sbjct: 253 AQSEAAFGHEWVNFWLHSEFLVI----GEGEKMSKSLGNFITLQTLIDRGYEPADYRYYL 308

Query: 427 LWRKNSELLDFDFC 440
           L     + L F   
Sbjct: 309 LGAHYKKQLTFTME 322


>gi|306832320|ref|ZP_07465474.1| glutamate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425759|gb|EFM28877.1| glutamate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 494

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 103/308 (33%), Gaps = 44/308 (14%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTRE 164
           +       K+ + + + +PTG +H+G+ R A+          GD +  +      +  R+
Sbjct: 5   QQETKMPKKIRVRY-APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRK 58

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
            ++ D                 + L  +  + P+ +    Y +    ++  KY  +LL  
Sbjct: 59  RHVED--------GERSQLENLKWLGMDWDESPQTH--EKYRQSERLDIYQKYIDQLLAE 108

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
                    K Y  +  +   R+  +A   +   +I+E  F           I     +G
Sbjct: 109 G-----KAYKSYVTEEELAAERERQEAAG-ETPRYINE--FLGMSEDEKAAYIAEREAKG 160

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            V    L   +S   +  D+ +  + F    +G   D  + K DG  TY   + A     
Sbjct: 161 IVPTVRLAVNESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDD 215

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                 ++I   G DH     +   V  A+  +  +       +  +       K+SKR 
Sbjct: 216 RLMEISHVIR--GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRD 269

Query: 405 GDFITLRH 412
            + +    
Sbjct: 270 TNTLQFIE 277


>gi|293382260|ref|ZP_06628200.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
 gi|293386691|ref|ZP_06631264.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
 gi|312908762|ref|ZP_07767701.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312979222|ref|ZP_07790926.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291080374|gb|EFE17738.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083860|gb|EFE20823.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
 gi|310625200|gb|EFQ08483.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311287987|gb|EFQ66543.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 478

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 63/412 (15%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E       +  KV +          +H+G+ R A+  DT+     + GYEV       D 
Sbjct: 19  EKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYEVNYVSNFTDV 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A  +     +          E        + +  + A  +   + + P+    
Sbjct: 79  DDKIIKAAKELKITAPEVAERFIKAFEEDT------QALNVQPATLHPRVMDHMPD---- 128

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  +   ++++ +   A  +  D++     F           ID L        G 
Sbjct: 129 -------ILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYG-KLSHQSIDELE------VGA 174

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   K D     L   +       D P  K    +    + +A       +   
Sbjct: 175 SQRTGVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMAT------KHLG 228

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I + G          E  +A + ++              +       KMSK  G+FIT
Sbjct: 229 ETIDIHGGGQDLEFPHHENEIAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFIT 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +  ++ +V    +RF M   +    + +    +KE +      Y +   A     FRQA 
Sbjct: 289 VHEMIQKVDPQILRFFMSTTQYRRPIRYSESTLKEAAAN----YQKLKNAFENLRFRQA- 343

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSEL--------------QLIVHLAEYPR 507
           D    L  D      + +  +   +E+              +L   + +Y  
Sbjct: 344 DAVASLPEDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSE 395


>gi|238916434|ref|YP_002929951.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|259511832|sp|C4Z3N5|SYC_EUBE2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238871794|gb|ACR71504.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 472

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 129/366 (35%), Gaps = 43/366 (11%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DT+   + + GY+V    Y+++     + +        ++ +   +  
Sbjct: 35  IHIGNARPMIVFDTVRRYLEYKGYDV---NYVSNFTDVDDKIIKKA---NEEGVSAEEIS 88

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                Y     K +        ++  L   E           +  +  +I     A  + 
Sbjct: 89  TR---YIAECKKDMEGMNIKPATTHPLATQEIGG-------MIDMIQTLIDKGY-AYEVN 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             ++     F        +  ID+L   G+  E        +  ++  +D   +L++   
Sbjct: 138 GTVYYRTRKFAEYG-KLSKKNIDDLEA-GHRDEAHSLKVTGEDEKEDPLDF--VLWKPKK 193

Query: 316 VGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSD-----HSGYVKRLE 368
            G+     P   SDG   +    +       +   D + I+  G D     H   + + E
Sbjct: 194 EGEPSWPSPW--SDGRPGWH---IECSVMSKKYLADEIDIHAGGEDLIFPHHENEIAQSE 248

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A A  V   K  ++         + +    KMSK  G+F T+R +  E   + +RF ML 
Sbjct: 249 A-ANGVPFSKYWMH-------NAFLNIDNKKMSKSLGNFFTVRDISREYDLEVLRFFMLS 300

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
                 ++F    +  +S +N +  +  A    R +   AKD+    D      ++    
Sbjct: 301 AHYRNPVNFSHDLM--ESAKNGLDRILTAVDNLRHLSENAKDVIMTEDEKKIIASIDDIY 358

Query: 489 SEFDTS 494
            +F+ S
Sbjct: 359 KKFEDS 364


>gi|228478032|ref|ZP_04062643.1| glutamyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250212|gb|EEK09465.1| glutamyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 484

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 102/298 (34%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q++ L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y K++ + LA+  + +     EE      +
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G V    L   
Sbjct: 119 QEAAGETPRYINEFLGMTEEEKAAYIAERE-----------------AAGIVPTVRLAVN 161

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 162 ESGVYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR 216

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 217 --GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|241958310|ref|XP_002421874.1| glutamyl-tRNA synthetase, mitochondrial, putative [Candida
           dubliniensis CD36]
 gi|223645219|emb|CAX39818.1| glutamyl-tRNA synthetase, mitochondrial, putative [Candida
           dubliniensis CD36]
          Length = 509

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 104/289 (35%), Gaps = 48/289 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWR 184
           + +PTG +H+G  R A+    LA     +G +        D    +    + +  ++ W 
Sbjct: 45  APSPTGFLHLGSLRTALYNYLLA---KSTGGKFILRIEDTDRNRLVPGAEDNIIHTLKWC 101

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             Q         P G Y     KH+      KY++E+L+          KD  ++     
Sbjct: 102 NLQIDEGPVEGGPYGPYRQSDRKHI----YQKYANEMLSKGLAYKCYCSKDRLLE----- 152

Query: 245 IRDDLKAL----NIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +R+  + L    N+ +D   ISE + H G P  IR       +    Y         +  
Sbjct: 153 LRESAQRLKPPTNVTYDRKCISEKE-HEGLPYVIR------FKSPNKYPPFKDLLHGELN 205

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
            +   + K   F         D  ++K+DG  TY  A++       +     + +V+ G 
Sbjct: 206 LQPQYNDKDRRFD--------DFVIVKNDGMPTYHFANV------IDDHLMKITHVVRGE 251

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +      +  A+  A+  +  Q        + L       K+SKR+GD 
Sbjct: 252 EWLPSTPKHIAMYHAMGWEPPQYIH-----IPLLTSLKDKKLSKRSGDL 295


>gi|224097273|ref|XP_002310896.1| predicted protein [Populus trichocarpa]
 gi|222853799|gb|EEE91346.1| predicted protein [Populus trichocarpa]
          Length = 1054

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 75/265 (28%), Gaps = 25/265 (9%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K   +       +  +         I     N TG +H+GH   A + DT+   
Sbjct: 90  NPTVVEKSWYAWWEKSGYFVADANSSKPPFAIVLPPPNVTGALHIGHALTAAIEDTIIRF 149

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+       ++ AG     +      R        D  L               + 
Sbjct: 150 KRMSGFNALWVPGVDHAGIATQVVVEKKLMR--------DHHLTRHDLGREKFVSEVWKW 201

Query: 214 ADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFI--SED 263
            D+Y   +L         +        + D   +A+ +      K   I  DI +   + 
Sbjct: 202 KDEYGGTILKQLRRLGASLDWSRECFTMDDKRSRAVTEEFNRLYKEGLIYRDIRLINWDC 261

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT----TQKCDMDRKQLLFRSTMVGD- 318
                      D +D   R+     G   P +           + D  +++  +T +   
Sbjct: 262 TLRTAISDVEVDYVDIKERKLQTVPGNKEPVEFGVLTSFAYPLEGDLGEIVVATTRLETM 321

Query: 319 --DVDRPLLKSDGSYTYFAADLAYF 341
             D    +   D  Y++     A  
Sbjct: 322 LGDTAVAIHPDDPRYSHLHGKFATH 346


>gi|83314451|ref|XP_730364.1| arginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23490068|gb|EAA21929.1| putative arginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 644

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 71/201 (35%), Gaps = 42/201 (20%)

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +   KY   L+   ++K L +  +       K   + L+   I   +   E+ + +   
Sbjct: 105 FQNCTKYILSLMYKYDDKTLQLW-NIICDKTKKENDEILRRFKIHKLVEKGENFYVKY-- 161

Query: 271 SPIRDIIDNLARQGYVYE-----GILPPPKSKTTQKC-------------------DMDR 306
             +  +++ + ++  +++      +L   K K  +                     D D 
Sbjct: 162 --VPKVLEEMEKKNILFKFGNKLCVLFKKKKKNLEIEKSEKSEKSEKSEKSEININDKDY 219

Query: 307 KQLLFRSTMVGDDV------------DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMI 353
            +++     + DD+                +K+D SYTY   DLA    + Y    D +I
Sbjct: 220 YEVVQIQDKIYDDLKNGDINILKNNYHILTIKNDISYTYAGIDLAAIYYRVYFEKADKII 279

Query: 354 YVMGSDHSGYVKRLEAVAAAV 374
           Y++  +   +  ++ ++   +
Sbjct: 280 YIVDENQKHHFMQIFSIYKNM 300


>gi|332359054|gb|EGJ36875.1| methionine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 665

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 114/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A  V          
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAEEV---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G  +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 66  -------GISPQAYVD--GMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAR 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|294054396|ref|YP_003548054.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613729|gb|ADE53884.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 511

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 69/441 (15%), Positives = 145/441 (32%), Gaps = 55/441 (12%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I++ + +P    H+GH    V+ D +A      G EV     +++ G ++   A   
Sbjct: 8   TTAIDYANGSP----HLGHAYEKVLTDIVARYRRLMGDEVKFLTGLDEHGQKVQMSAQKE 63

Query: 182 FWRYQQALYNNDSDLP----------------EGYYPGVYLKHVGKELADK---YSSELL 222
               Q+       +                          ++ + + L DK   Y +E  
Sbjct: 64  GIAPQEICDRLAVEFQGVCGRLHISNDDYIRTTQARHKKVVQEILQTLYDKGEIYKAEYS 123

Query: 223 N-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             + + +   + +   V      I  +++ + I+ + F     +       I+   ++L 
Sbjct: 124 GYYSQRQEQFVTEKEKVNGEWPEIFGEVEEV-IETNYFFKLAQYQEWLVDFIQSN-EDLI 181

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAY 340
              +    +L   K      C    K  L     +  D D       D    Y  A   Y
Sbjct: 182 YPRFRSADVLQFLKEPLNDLCISRPKSRLEWGIELPFDTDFVTYVWFDALTNYITA-AGY 240

Query: 341 FKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
              ++ + +    +V+G D     H+ Y      +  A+  +  +  ++    +      
Sbjct: 241 GTEEFAQHWPADYHVIGKDILVPPHAVY---WPIMLKALDIELPKHFLVHGWWLS----- 292

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  GD +    ++++ G+D+ R+  + R+ +   D +F      S+ N      
Sbjct: 293 SGAKMSKSTGDVVNPLDLIEQFGADAFRYF-VTREMNVGQDSEFSLDLFMSRYNSDLAND 351

Query: 456 YAYARCRSIF---RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                 R +    R  +   P    +  P   + +  E    ELQ +    ++ + +E  
Sbjct: 352 LGNLVSRLLNMGGRYTEAKVPAASVNEAPEQELKKLWEATKDELQPLFESFQFHKALERI 411

Query: 513 ----------TIAQEPYKLAF 523
                        + P+KLA 
Sbjct: 412 FGFISGINKYAETRAPWKLAK 432


>gi|169831684|ref|YP_001717666.1| glutamyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688340|sp|B1I4Z1|SYE_DESAP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|169638528|gb|ACA60034.1| glutamyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 501

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 93/286 (32%), Gaps = 34/286 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G          D G  I+  A  +    +  
Sbjct: 9   APSPTGSLHIGGARTALFNWLFAR---HHGGAFILRLEDTDTGRNIDEAAAQIVSSLRWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-KDYSVQAMMKIIRD 247
             + D     G   G Y +    EL  + +  LL   +  W     +D + Q      R 
Sbjct: 66  GIDWDEGYDRGGPFGPYRQSERFELYREEARRLLANGDAYWCYCTPEDLAAQREEARQRG 125

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   + +                   D        G      +  PK+ TT   D  R 
Sbjct: 126 EVPRYDGRCRQL-------------TDDARREKEAAGIRPALRVKMPKTGTTVVKDRIRG 172

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F +  +    D  ++KS+G  TY       F C  + G   + +V+ ++        
Sbjct: 173 EIGFDNATLD---DIIVMKSNGGPTYN------FACVVDDGAMRISHVIRAEEHLSNTPK 223

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPI--KMSKRAGDFITLR 411
           + V   +      +   L E V +     P   K+SKR G      
Sbjct: 224 QIVLFNL------LGYALPEFVHVPMILAPDRSKLSKRHGATAVDE 263


>gi|325962199|ref|YP_004240105.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468286|gb|ADX71971.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 488

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 128/396 (32%), Gaps = 43/396 (10%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +  A   G  HVGH R A+  D L   +AF G  VT    + D   +I  LA S    + 
Sbjct: 28  YCGATVQGMPHVGHIRSAIAFDQLTRWLAFRGLRVTVVRNVTDIDDKI--LAKS-EASFA 84

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                   ++PE  +  +  ++  +E    Y    ++ P  +         + A+++ + 
Sbjct: 85  PGFQPEAGEVPEEEWWALAYRYE-REFLKAYDILGVSRPTYEPRATGHIPEMHALIQQLI 143

Query: 247 DD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           D      AL+   D++     + +      R  ID++             P +    K D
Sbjct: 144 DRGHAYPALDDSGDVYFDVRSWSKYGA-LTRQNIDDMQA----------APDADPRGKKD 192

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-H 360
                L  + +  G+            G   +     A         FD  I+  G D  
Sbjct: 193 PRDFALW-KGSKEGEPTTASWASPWGAGRPGWHLECSAMVTKYLGTEFD--IHGGGLDLR 249

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             + +   A + A     A   +       +  +G   KMSK  G+ I+   +++     
Sbjct: 250 FPHHENEMAQSQAAGHPFANFWMHNG---MVTYEGE--KMSKSIGNTISPAEMLELASPR 304

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-----KDIFPDL 475
            VR+ +       +LD+    ++E +          A  R      +A     K+     
Sbjct: 305 VVRYYLGQAHYRSVLDYRPTSLQEAAA---------AVERIDGFLAKAAARFGKEQGSVD 355

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                  N +   SE    +L +   LA     +  
Sbjct: 356 GGSGPSSNAMEAFSEAMDDDLNVPRALAALHETVRA 391


>gi|308189153|ref|YP_003933284.1| Valyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308059663|gb|ADO11835.1| Valyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 951

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|288941693|ref|YP_003443933.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897065|gb|ADC62901.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 942

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 21/183 (11%)

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            +       D  +Y+ GSD   G+ +     + A+  +     VL         D    K
Sbjct: 553 HRDGLSTPAD--LYLEGSDQHRGWFQSSLMTSVAMHGRAPYRQVLTHGF---TVDAKGEK 607

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ ++ + V+  +G+D +R  +        +     ++ +++ +        AY 
Sbjct: 608 MSKSKGNVVSPQDVMKTLGADIIRLWVAATDYRSEMSVS-DEILKRTAD--------AYR 658

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           R R+  R          FD     V P E  E D   +     L +   VI  A    + 
Sbjct: 659 RIRNTARFLLANLEG--FDPAVNCVAPSEMIELDRWAVDRAHRLQQ--EVIA-AYRDYQF 713

Query: 519 YKL 521
           + +
Sbjct: 714 HLI 716


>gi|218134243|ref|ZP_03463047.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991618|gb|EEC57624.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
           43243]
          Length = 474

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 65/409 (15%), Positives = 126/409 (30%), Gaps = 63/409 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + + + +  E    L     K+ +          +H+G+ R  +V DT+   + + G
Sbjct: 6   NMKIYNTLTAKKEEFVPLEEGKVKMYV--CGPTVYNLIHIGNARPMIVFDTVRRYLEYKG 63

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YEV    Y+++     + +  +             +D+    Y     K +        +
Sbjct: 64  YEV---NYVSNFTDVDDKIIKAANE------EGVTADVISTRYIAECKKDMAGMNVKPAT 114

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              L   E        D  ++ +  +I     A N+   ++     F +G     +  ID
Sbjct: 115 KHPLATEE-------IDGMIELIQTLIDKGY-AYNVNGTVYYRTRKF-KGYGKLSKKNID 165

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
           +L        G      +   +K D     L           + P   S+G   +     
Sbjct: 166 DLEA------GHRDIKVAGGEEKEDPLDFVLWKPKKEGEPYWESPW--SEGRPGWHTECS 217

Query: 339 AYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              K       D  I+  G D     H   + + EA A  V   K  ++    ++     
Sbjct: 218 VMAKKYLGESID--IHAGGEDLIFPHHENEIAQSEA-ANGVQFSKYWMHNAFLKINN--- 271

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
               +KMSK  G+F T+R +  +     +RF ML       L+F    ++          
Sbjct: 272 ----VKMSKSLGNFFTVRDIAAKYDLQVLRFFMLSAHYRNPLNFSEELMESA-------- 319

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                       + + +       +L       Q+ E    E  ++  L
Sbjct: 320 ------------KNSLERITTAAGNLNHMIDNAQDREVSEEEKNILAQL 356


>gi|154482623|ref|ZP_02025071.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC
           27560]
 gi|149736523|gb|EDM52409.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC
           27560]
          Length = 648

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 116/391 (29%), Gaps = 69/391 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+   A++ D++       GY+V  +   ++ G +I   A   
Sbjct: 8   TTAIAYTSGKP----HIGNTYEAILADSIVRFKRQQGYDVRFQTGTDEHGQKIELKAAEA 63

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ + N    + E       +  +     DK+        E++   I K    Q  
Sbjct: 64  GITPKEFVDNVSGVIKE-------IWDLMNTSYDKFIRTTDPDHEKQVQKIFKKLYDQG- 115

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQG 284
             I +   + +     + F +E     G                    +    D L    
Sbjct: 116 -DIYKGHYEGMYCTPCESFFTESQLVDGKCPDCGREVTPAKEEAYFFRMSKYADRLIEHI 174

Query: 285 YVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +   + P   K            Q   + R    +   +  D      +  D    Y 
Sbjct: 175 NTHPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWIDALSNYI 234

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
                        G+D    V G++   Y K   A    + +   + + +   ++ +  D
Sbjct: 235 TG----------LGYD----VDGNNDPLYDKYWPADLHLIGKDILRFHTIYWPIMLMALD 280

Query: 395 --------GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDF 439
                   G P       KMSK  G+ I    + +  G D+VR+ +L            +
Sbjct: 281 VPLPKQIFGHPWLLQGDGKMSKSKGNVIYADDLANLFGVDAVRYFVLHEMPFENDGTITW 340

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             + E+   +    +     R  S+  +  D
Sbjct: 341 ELMVERMNSDLANTLGNLVNRTISMSNKYFD 371


>gi|295106117|emb|CBL03660.1| methionyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 531

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 105/340 (30%), Gaps = 57/340 (16%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +  DT+A     +GY+V     +++ G ++   A +     Q
Sbjct: 14  YVNAAP----HLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAAAKGMTPQ 69

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI-- 244
               + +             +     L   Y+   +   E +    V+ +  +   K   
Sbjct: 70  DWCDSMEPAF----------RDAWDMLGITYTD-FVRTTEPRHAKSVQKFWQELYDKGWC 118

Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDPSPI---------------RDIIDNLARQGY--- 285
            +   +    +  + + +E D  + D   +                +    L+  G    
Sbjct: 119 YKGSYEGWYCVHEETYYAESDLEKNDEGQLVCPDCKRPVQKAGGEENWFFKLSEFGDKLL 178

Query: 286 -VYE---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--LA 339
             YE     + P   K      +         +    D   PL   +G   Y  AD  LA
Sbjct: 179 AFYEENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLA 238

Query: 340 YFK-----CKYER--GFDN---MIY-VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           Y        + ER   FD    M Y  +G D    + R   V        A + +     
Sbjct: 239 YLTGIGYGDEGERAGEFDRRWPMQYHFVGKD----ITRFHCVIWPAMLLAAGMPITHTVF 294

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              +      KMSK  G+ +    +    G D+ R+  + 
Sbjct: 295 GHGFLLTKGEKMSKSKGNALKPADLCRVFGVDAYRYYFMS 334


>gi|163794895|ref|ZP_02188864.1| Isoleucyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
 gi|159179714|gb|EDP64241.1| Isoleucyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
          Length = 936

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 87/229 (37%), Gaps = 32/229 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +Y+ GSD   G+      +  +   + +A  + +L     L +DG   KMSK  G+    
Sbjct: 567 LYLEGSDQHRGWFHSS--LLESCGTRGRAPYDAVLTHGFVLDQDGR--KMSKSLGNVTAP 622

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AK 469
           + V+D+ G+D +R  ++    SE L      +K Q+           Y R R+  R    
Sbjct: 623 QEVMDKYGADILRLWVVSSDYSEDLRIGPEILKHQADH---------YRRLRNTLRYLLG 673

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
            +    D +  P   +P+       E  ++  +AE   V+   T   + + L   ++   
Sbjct: 674 ALDGYTDAEQLPVEQMPEL------ERWVLHRIAELDVVVRRCTDDFDFHTLFTQIHQFC 727

Query: 530 S-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +      +   R++         +R  ++ R     A  +++    + +
Sbjct: 728 AVDLSAFYFDVRKDAVYC-----DRPDSVRR----RAARTVMAQLFDCL 767


>gi|297545338|ref|YP_003677640.1| glutamyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843113|gb|ADH61629.1| glutamyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 497

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 91/285 (31%), Gaps = 39/285 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     +       ++     ++ R             +   + 
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSS-----KDFEELIFKELE 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D   P G Y       +  + A K   E   +   +     ++       
Sbjct: 64  WLGIEWDEGPDKPGPYGPYRQSERLAIYHKFAQKLIEEKKAY---RCYCTPEELEEDRKK 120

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + R D+   + +      E +          +      R+  +       P  +  +  
Sbjct: 121 AVERGDIPRYSGRCRYLTKEQE----------EAFIKEGRKPVIR---FIVPDDEVIEFE 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G DH  
Sbjct: 168 DMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--GEDHIY 220

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              +   +  A+  +             L       K+SKR G+ 
Sbjct: 221 NTPKQILIYKALGFEIPTFAH-----APLILGPDRTKLSKRHGNT 260


>gi|229496737|ref|ZP_04390448.1| valyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316283|gb|EEN82205.1| valyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 873

 Score = 46.1 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 65/221 (29%), Gaps = 35/221 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +        +    +  +   +     +     N TG +H+GH     + D L   
Sbjct: 8   NPSEIESKWYQYWLEQKHFA-STPDEREPYTVVIPPPNVTGVLHMGHMLNNTIQDVLVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY                            A +   +D          +  + ++ 
Sbjct: 67  ARLLGYN---------------------------ACWVPGTDHASIATEAKVVARLAEQG 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK +        E +L    D++ +    II + LK L    D   +           +
Sbjct: 100 IDKRT-----LTRETFLKHAWDWTHEHG-GIILEQLKRLGASCDWDRTAFTLDEDRSRSV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             +  +L   G +Y G+         Q   +  +++++R  
Sbjct: 154 IKVFCDLYESGLIYRGVRIVNWDPKAQTA-LSDEEVIYREE 193


>gi|262375811|ref|ZP_06069043.1| valyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309414|gb|EEY90545.1| valyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 964

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K           +  +   KG    I     N TG +H+GH     + 
Sbjct: 7   NIATTYDPTEIEKKWYQTWEERGYFKPSE--KGESFCIMIPPPNVTGSLHMGHGFNNAIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L      SG                           +  L+   +D        V  +
Sbjct: 65  DALTRFNRMSG---------------------------KNTLWQPGTDHAGIATQMVVER 97

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +   ++     +   EK++  V ++  Q+   I R  ++ L    D          
Sbjct: 98  QLGAQGVSRH-----DLGREKFIEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L  +G +Y G          Q    D +
Sbjct: 152 GLSNAVKEVFVKLHEEGLIYRGKRLVNWDPKLQTALSDLE 191


>gi|213647450|ref|ZP_03377503.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. J185]
 gi|213857446|ref|ZP_03384417.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. M223]
          Length = 62

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 6/61 (9%)

Query: 1  MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60
          M + A  S ++   +         E +      + +      G    N  M +++ LG+ 
Sbjct: 1  MNIQALLSEKVSQAMIAAGAPADCEPQ------VRQSAKVQFGDYQANGMMAVAKKLGMA 54

Query: 61 P 61
          P
Sbjct: 55 P 55


>gi|119510813|ref|ZP_01629939.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119464576|gb|EAW45487.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 1010

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 52/207 (25%), Gaps = 33/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        Y  +    G    I     N TG +H+GH   + + DTL       G
Sbjct: 18  EAKWQKFWQENQVYKADPNHPGEPYCIVIPPPNVTGSLHMGHAFESALIDTLIRYHRMKG 77

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                      +  L+   +D        +  K + KE   +Y 
Sbjct: 78  ---------------------------RNTLWVPGTDHASIAVHTMLEKQLKKEGKTRYE 110

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W               I + LK L +  D          G    + +   
Sbjct: 111 LGREQFLERAWQWKADSEGT------IVNQLKRLGVSVDWTRERFTLDAGLSQAVLEAFV 164

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
           +L   G +Y G         +Q    D
Sbjct: 165 SLYESGLIYRGEYLVNWCPASQSAVSD 191



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 101/287 (35%), Gaps = 32/287 (11%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           ++W  + +D+ V+     I   L     Q   + +  +           ++   A +   
Sbjct: 390 QRWTKVYRDWLVKLKDWCISRQLW-WGHQIPAWYAVSETDGQITDTTPFVVAKSADE--A 446

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK--CK 344
           +E       +    + D D     F S +           S   +     DL  +     
Sbjct: 447 WEKAKSQFGADVKLEQDPDVLDTWFSSGL--------WPFSTLGWPEQTPDLETYYPNST 498

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              GFD +I+         V R+  +    + K    +V +  LV L  +G   KMSK  
Sbjct: 499 LVTGFD-IIFFW-------VARMTMMGGHFTGKMPFNDVYIHGLV-LDENGQ--KMSKTK 547

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I    ++D+ G+D++R+ ++        +      +++ +      V+ +      +
Sbjct: 548 GNGIDPLLLIDKYGTDALRYTLIKEVAGAGQNIRLEYDRKKDES---ASVEASRNFANKL 604

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +  A+ +  +LD     +   P  +E   + +     L+ Y +VI  
Sbjct: 605 WNAARFVMMNLDGQTPAQLGEPIPTELSDTWI-----LSRYHQVINQ 646


>gi|317009763|gb|ADU80343.1| valyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 872

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 100/319 (31%), Gaps = 38/319 (11%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D LA      GY+   +  ++ AG     + 
Sbjct: 38  KGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQNVV 97

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  +Q L      + + Y           E  +K    +L   +   +      + 
Sbjct: 98  ------EKQLLSQG---IKKEYLGREEFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKC----- 343
               K        R + LF  + +     D+  + L+            +          
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKAILPLINRAIPIIADAHVEM 268

Query: 344 -------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                  K   G D   Y +G  H     ++        ++K  +N    E   L R   
Sbjct: 269 EFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGEFENLERLEA 321

Query: 397 PIKMSKRAGDFITLRHVVD 415
             K+ +R  +   L  + +
Sbjct: 322 RDKVVERLKENALLEKIEE 340


>gi|229588593|ref|YP_002870712.1| valyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229360459|emb|CAY47316.1| valyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 948

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 54/213 (25%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYNTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L                                 +   
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV--------------------------------ERQL 92

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +       +   EK+L  + ++  Q+   I R  ++ L    D          G    ++
Sbjct: 93  EATGQSRHDLGREKFLEKIWEWKDQSGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|195124630|ref|XP_002006794.1| GI21262 [Drosophila mojavensis]
 gi|193911862|gb|EDW10729.1| GI21262 [Drosophila mojavensis]
          Length = 1048

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 53/203 (26%), Gaps = 39/203 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S       +                K  +     N TG +H+GH     +
Sbjct: 94  SPRYVEAQWYSWWEKQGFFTPEYGRDSIDAPNPNGKFIMVIPPPNVTGSLHLGHALTNAI 153

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR                      
Sbjct: 154 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWR---------------------- 191

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                    +      +   EK++  + D+  +   + I D LKAL   +D         
Sbjct: 192 ---------EEGLSRHDLGREKFIERIWDWRREKGGR-IYDQLKALGSSYDWTRVNFTMD 241

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
                 + +    L  QG VY  
Sbjct: 242 PKLCRAVTEAFVRLHEQGTVYRS 264


>gi|194466607|ref|ZP_03072594.1| glutamyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453643|gb|EDX42540.1| glutamyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 501

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 108/300 (36%), Gaps = 44/300 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + + + +PTG +H+G+ + A+     A    F G  V R   I D   + N     
Sbjct: 3   QKVRVRY-APSPTGFLHIGNAQSALFNYLFAR--HFDGTMVLR---IEDTDTKRNVEDGE 56

Query: 181 VFWRYQQALYNNDSDLPEG-------YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              R  + L+    D  EG       Y P    +   + +  KY  ELL+          
Sbjct: 57  ASQR--ENLHWLGIDWDEGPNKPNPKYAPYRQSERSKEGIYHKYIQELLDKGI-----AY 109

Query: 234 KDYSVQAMMKIIRDDLKALNI--QHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           KDYS +  +  +R+  KA N    +D  +  + +  +               +G      
Sbjct: 110 KDYSTEEELAEMRERQKANNEPPHYDGRWYGKSEEEQKAA----------EAKGLKPTIR 159

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              PK    +  D+ R  + F S  +G D    + KSDG  TY   + A     +     
Sbjct: 160 FHFPKDHDYEWDDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDIT 214

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G+DH     +  A+  A+         +      ++      K+SKR  D +  
Sbjct: 215 HVLR--GADHISNTPKQIAIYEALGWDHPTFCHIPL----IFNPKTRKKLSKRDKDTLQF 268


>gi|325270953|ref|ZP_08137540.1| isoleucine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324986750|gb|EGC18746.1| isoleucine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 1221

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 68/306 (22%), Positives = 110/306 (35%), Gaps = 53/306 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +++   E     V   +   E A        N  +
Sbjct: 576 LNDW-----NLSRSRFWGTPLPIWRDENR-GEKCIGSVEELYNEIEKAVAAGVMDRNPLK 629

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDN----L 280
           E    +V D+S +      R DL    +   + ++E+    +R +   I    D+     
Sbjct: 630 EAGF-VVGDFSQE---NYDRIDLHRPYVDEIVLVNEEGRPMYR-ETDLIDVWFDSGSMPY 684

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+  Y +EG +     K T K + + ++ L  ST  G  V      +D            
Sbjct: 685 AQLHYPFEGEINAEGLKATGKTEAEYRRELVHSTYEGTAVPPAFFPAD------------ 732

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                       I   G D   G+   L A+A  V +  A  NV+   LV    D    K
Sbjct: 733 -----------FINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLV---LDAKGNK 777

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPV 451
           MSK  G+      ++ + G+D VRF M+      + L FD   V E  ++          
Sbjct: 778 MSKHVGNVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDECRRKFFGTLYNTYS 837

Query: 452 FYVQYA 457
           F+  YA
Sbjct: 838 FFALYA 843


>gi|284047863|ref|YP_003398202.1| glutamyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952084|gb|ADB46887.1| glutamyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 488

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 114/340 (33%), Gaps = 62/340 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R+    D+ +QI     S+ 
Sbjct: 9   APSPTGYLHIGGARTALFNWLFARSQGGKMILRIE--DTDRDRLKEDSVSQI---ITSLK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         +     G   G Y +    +L  KY  +L++  +  +        ++A  
Sbjct: 64  WLGLDWDEGPEV----GGDHGPYYQSERLDLYRKYCQQLVDEGK-AYYCFCSAADLEAQR 118

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R   +  +               DPS  +  ++     G  +   +  P   T    
Sbjct: 119 EEQRKKKQPFHYAGTC-------RNLDPSEAKKRVEA----GEPHSIRIKLPHDGTITVH 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM    + F      D     ++K++G  TY  A +       +     M +V+ ++   
Sbjct: 168 DMIHGDVTFNWNQFDDF---VIMKTNGIPTYNFAVV------VDDHLMGMTHVLRAEEHL 218

Query: 363 Y-VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH---VVDE 416
               +   +  A+  K  +   +    + L  D    K+SKR G       R    + + 
Sbjct: 219 TNTPKQLVIYEALGWKAPEFGHM---PMILAPD--RSKLSKRHGATSVEEFRDKGYLAEA 273

Query: 417 V-----------GSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +           G+D   F +       +  FDF K+ ++
Sbjct: 274 IINYLTLLGWAPGNDEEIFTLE----DTVKAFDFSKMSKK 309


>gi|312876049|ref|ZP_07736038.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797247|gb|EFR13587.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 817

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFREIEKKWQQKWFSQN-----KYKVSEDSPKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|254689226|ref|ZP_05152480.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256257476|ref|ZP_05463012.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754731|ref|ZP_05867079.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883752|ref|ZP_05895366.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248320|ref|ZP_06932038.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674839|gb|EEX61660.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873280|gb|EEX80349.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175489|gb|EFH34836.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 515

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 106/339 (31%), Gaps = 36/339 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDII 277
                W  +  +         +R D     +++        ++ E+ +     +    ++
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRAD----GVRYGPPGTPVEWVEEESYFFRLSAYQDKLL 176

Query: 278 DNLARQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           D      G++        +        +   + R    +   + GD+     +  D    
Sbjct: 177 DLYENNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTN 236

Query: 333 YFAADLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           Y  A L Y     ER        +++G D    + R  AV        AQ+ +       
Sbjct: 237 YITA-LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAH 291

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            +      KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 292 GFLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|168486884|ref|ZP_02711392.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570172|gb|EDT90700.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 486

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWIIQKKDGYPTY---NFAVAIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|83594960|ref|YP_428712.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123739388|sp|Q2RN70|SYL_RHORT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83577874|gb|ABC24425.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 862

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++    G    R    +     +E     P+G +H+GH R   +GD +A      G
Sbjct: 14  AKWQTAWAEGGCFTAREDRTRPKYYVLEMF-PYPSGRIHMGHVRNYTLGDVVARFKRAQG 72

Query: 159 YEV 161
           + V
Sbjct: 73  FNV 75


>gi|289668595|ref|ZP_06489670.1| valyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 944

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGETYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGHTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|254821843|ref|ZP_05226844.1| valyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 882

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 58/212 (27%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     +    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 16  DPAAAEGAIYQKWVDAGYFAADPASAKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV  +  ++ AG                                V  K +  + 
Sbjct: 76  KRMQGYEVLWQPGMDHAGI---------------------------ATQSVVEKQLAVD- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 108 ----GKTKEDFGRELFVEKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R I   L   G +Y        S   Q    D
Sbjct: 163 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISD 194



 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 68/226 (30%), Gaps = 38/226 (16%)

Query: 363 YVKRLEAVAAAVSEKKA---------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V R+      V +  A         Q+      L  L RD    KMSK  G+ I     
Sbjct: 494 WVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDW 553

Query: 414 VDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+  G+D++RF +         L      V+                  R+   +  +  
Sbjct: 554 VELFGADALRFTLARGASPGGDLAIGEDHVRAS----------------RNFCTKLFNAT 597

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SV 531
                +      +P  +E   ++  ++  L E    +++A    E  +    LY  A   
Sbjct: 598 RYALLNGAQLASLPPPAELTDADRWILGRLEEVRAEVDSAFDNYEFSRACEALYHFAWDE 657

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           F   +         +   A     T   L    A    +   L ++
Sbjct: 658 FCDWY-----VELAKTQLAEGVAHTTAVLA---ATLDTL---LRLL 692


>gi|153814541|ref|ZP_01967209.1| hypothetical protein RUMTOR_00755 [Ruminococcus torques ATCC 27756]
 gi|331089315|ref|ZP_08338216.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145848035|gb|EDK24953.1| hypothetical protein RUMTOR_00755 [Ruminococcus torques ATCC 27756]
 gi|330405496|gb|EGG85028.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 491

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 109/304 (35%), Gaps = 34/304 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D    +   L +      + 
Sbjct: 10  APSPTGRMHVGNLRTALYAYLIA---KHEGGDFILRVEDTDQERFVEGALDIIYRTMEKT 66

Query: 188 ALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L +++    +G + G Y++       L   Y+ +L+   +  +        ++++   +
Sbjct: 67  GLLHDEGPDKDGGF-GPYVQSERQASGLYLDYAKQLVEQGD-AYYCFCDKERLESLKTSV 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            DD   + +     +             ++ ++    +G  +   L  P    T   D  
Sbjct: 125 SDDGTDIVVYDKHCLGLS----------KEEVEKNLAEGKPWVIRLNVPNEGETTFHDEI 174

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 175 YGNITVPNNELD---DMILIKSDGFPTY---NFANVIDDHLMGITHV--VRGNEYLSSAP 226

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVR 423
           +   +  A   +     + +     L  D    K+SKR G   +   ++D+  V    V 
Sbjct: 227 KYNRLYEAFGWE-----IPVYVHCPLITDENHKKLSKRCGHA-SYEDLIDQGFVSEAVVN 280

Query: 424 FMML 427
           ++ L
Sbjct: 281 YVAL 284


>gi|323526769|ref|YP_004228922.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383771|gb|ADX55862.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 966

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 68/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ S+    +                   G     +I+    N TG +H+GH     + 
Sbjct: 15  TLAKSFEPHTIEAHWGPEWEKRAYAAPVFDGSKKDFSIQLPPPNVTGTLHMGHAFNQTIM 74

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 75  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 102

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I + ++ L    D          
Sbjct: 103 IVVERQLDAKGVSRHDLGREKFVERVWEWKQESG-STITNQVRRLGASIDWSREYFTMDD 161

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 162 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 212


>gi|240138137|ref|YP_002962609.1| leucine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008106|gb|ACS39332.1| leucine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 875

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   + +   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 21  AKDAEPRWQQAWDAAKLFETKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARY 79

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 80  KRAKGHNV 87


>gi|254455824|ref|ZP_05069253.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082826|gb|EDZ60252.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 896

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 25/216 (11%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            V E I    + + +     D  Q      ++S       D   +  D   T+       
Sbjct: 478 EVNETIANIYEIEGSDCWFSDDPQRFLGKKYKSEDYEKLSDIVEVWFDSGSTHSFV---- 533

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + + +  +   +Y+ GSD   G+       +     +    ++L    V    DG  +K
Sbjct: 534 LEKREDLKWPASMYLEGSDQHRGWFHSSLLESCGTRGRAPFESILSHGFVV---DGKGLK 590

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    ++ + G+D +R  +     +E L  D   + + ++         +Y 
Sbjct: 591 MSKSLGNVIAPEDILKKYGADILRIWVASSNYAEDLRIDHSILDQHAE---------SYR 641

Query: 460 RCRSIFR----QAKDIFPDLDFDLFPRNVIPQESEF 491
           + R+ FR       D F  +D      + +P+  +F
Sbjct: 642 KIRNTFRYLLGNLNDNFEKIDLQKINLSELPELEKF 677


>gi|195478617|ref|XP_002086516.1| GE23171 [Drosophila yakuba]
 gi|194186306|gb|EDW99917.1| GE23171 [Drosophila yakuba]
          Length = 938

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 115/329 (34%), Gaps = 44/329 (13%)

Query: 250 KALNIQHDIFIS-EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +A  +   +F S E      + + I  + + L ++G + +        +      +   +
Sbjct: 489 RAWGVPIPVFYSRESGKVVLNSTLIEHLCNLLRQEGSI-DFWWVKSVEELVPANILRELR 547

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM--IYVMGSDH-SGYVK 365
              +  + G D+      S  +++               G D +  +Y+ G D  +G+ +
Sbjct: 548 CEAKDLVKGTDILDIWFDSGSTWSAVL------------GKDKIADLYLEGYDQFTGWFQ 595

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
               ++ A  E      + +        D    KMSK  G+ I+ + +  + G+D++R+ 
Sbjct: 596 SSLLMSIAARECSPYKALFVHGF---TVDEKGYKMSKSLGNVISPKQITKKYGTDALRWW 652

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           +       +      K+ +Q+ EN         ++ R   R  K +      D      +
Sbjct: 653 VASHGTQHMSITVSDKLLQQAAEN--------LSKVRGTLRYLKGVIG----DKQSAEKL 700

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPR 544
              S+       L+  L E+   +E    A E  ++  Y+ + +A+     + H     +
Sbjct: 701 IPTSDKSYLNRFLLSQLVEFGSEVEKLYNAYEYNRVVAYVQNFIANQVSAVYVH---LIK 757

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSG 573
            R    +++++         A+   +   
Sbjct: 758 DRLYCGDDQEI--------LAIRQTLTHC 778


>gi|168244036|ref|ZP_02668968.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194449603|ref|YP_002048499.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194407907|gb|ACF68126.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205337066|gb|EDZ23830.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 951

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYEEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|15903922|ref|NP_359472.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516946|ref|YP_817285.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|225859826|ref|YP_002741336.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307128331|ref|YP_003880362.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|30173137|sp|Q8CWN5|SYE_STRR6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|122277869|sp|Q04IA3|SYE_STRP2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|15459573|gb|AAL00683.1| Glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Streptococcus
           pneumoniae R6]
 gi|116077522|gb|ABJ55242.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|225720536|gb|ACO16390.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|306485393|gb|ADM92262.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332071140|gb|EGI81635.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 486

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWIIQKKDGYPTY---NFAVAIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|254560699|ref|YP_003067794.1| leucine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254267977|emb|CAX23845.1| leucine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 875

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   + +   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 21  AKDAEPRWQQAWDAAKLFETKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARY 79

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 80  KRAKGHNV 87


>gi|218529833|ref|YP_002420649.1| leucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522136|gb|ACK82721.1| leucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 875

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   + +   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 21  AKDAEPRWQQAWDAAKLFETKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARY 79

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 80  KRAKGHNV 87


>gi|218516422|ref|ZP_03513262.1| valyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 278

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ADAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172


>gi|47218924|emb|CAF98122.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 516

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 93/287 (32%), Gaps = 44/287 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G          D    +   A S+    + A
Sbjct: 37  APSPTGFLHLGGLRTALYNYIFA---KKYGGSFVLRLEDTDRSRLVPGAAESIEDMLEWA 93

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYSVQAM 241
               D     G   G YL+    +L  + + +L+        F   + L ++K    +AM
Sbjct: 94  GVPPDEGPRRGGLFGPYLQSQRLDLYTQTARQLVESGNAYYCFCSSQRLELLKK---EAM 150

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                           +   +D   +G P  IR  ++                       
Sbjct: 151 RSGQTPRYDNRCRHLQLKQVQDKLAQGIPHVIRFRLETGVE------------------- 191

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDH 360
              D      R  +   + D  ++K+DG  TY  A++       +  +  + +V+ GS+ 
Sbjct: 192 PFQDMIFGWTRHDVAQVEGDPVVIKADGYPTYHLANI------VDDHYMRISHVLRGSEW 245

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                +   +  A+  +           + L  +    K+SKR GD 
Sbjct: 246 LISTSKHLLMYRALGWQPPAFGH-----LPLLMNKDGTKLSKRQGDI 287


>gi|39998226|ref|NP_954177.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81701102|sp|Q747X9|SYI_GEOSL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39985172|gb|AAR36527.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 923

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 37/248 (14%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D+         +  G + P   K+  + +MD   + F S +                   
Sbjct: 499 DLWYEKEAAELLPPGTVCPQCGKSAFEKEMDILDVWFDSGV------------------- 539

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +  A  + + E G    +Y+ GSD   G+       +           VL    V    
Sbjct: 540 -SHAAVLENRPELGSPANMYLEGSDQHRGWFHSSLLASVGTRGVAPYREVLTHGFVV--- 595

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +    V+ + G++ +R  +  +   + +      +   ++      
Sbjct: 596 DGSGRKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQDYRDDVRISQEILTRLAE------ 649

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
              AY R R+  R       D D D+   +++P +   +     L   L      +  A 
Sbjct: 650 ---AYRRIRNTCRYLLGNLNDFDPDV---DMVPYDRMTELDRWALHQ-LEVLKEKVAAAY 702

Query: 514 IAQEPYKL 521
              E + L
Sbjct: 703 NEYEFHIL 710


>gi|86134934|ref|ZP_01053516.1| isoleucyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821797|gb|EAQ42944.1| isoleucyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 1155

 Score = 46.1 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+       + 
Sbjct: 663 GVDQTRGWFYTLHAIATMIFDDVAYKNVVSNGLV---LDKNGHKMSKRLGNAADPFTTLS 719

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
             G+D+ R+ M+   N  + L FD   ++E + K     Y  Y++    +        + 
Sbjct: 720 TYGADATRWYMISNANPWDNLKFDLEGIEEVKRKFFGTLYNTYSFFSLYTNID--GFAYK 777

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
           + D  L  R  + +    +     LI  + ++           EP + A 
Sbjct: 778 EADIALNERPELDRWILSELH--TLINKVDKF-------YSDYEPTRAAR 818


>gi|325522725|gb|EGD01223.1| valyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 955

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFEPGRPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDATGVSRHDLGREKFVERVWEWKQQSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|296158135|ref|ZP_06840967.1| valyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295891471|gb|EFG71257.1| valyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 959

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 69/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + +      E          +   +F       N TG +H+GH     + 
Sbjct: 11  TLAKSFEPQTIEAHWGPEWEKRAYATPVIQENRKDFSIQLPPPNVTGTLHMGHAFNQTIM 70

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 71  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I + ++ L    D          
Sbjct: 99  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITNQVRRLGASIDWSREYFTMDD 157

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 158 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGSLW 208


>gi|294664577|ref|ZP_06729919.1| valyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292605661|gb|EFF48970.1| valyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 789

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGQTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|187935407|ref|YP_001886744.1| glutamyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691640|sp|B2TND7|SYE_CLOBB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|187723560|gb|ACD24781.1| glutamate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 485

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 125/326 (38%), Gaps = 39/326 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG MHVG+ R A+    +A     +G  + R   I D   Q   +  A+ + +   
Sbjct: 11  APSPTGYMHVGNLRTALYAYLIAK--HEAGDFILR---IEDT-DQERLVDGAVDIIYNTL 64

Query: 187 QALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +    N  + P+ G   G Y++   K +  +Y+  L+   E  +    KD      + ++
Sbjct: 65  KLTGLNHDEGPDVGGEVGPYVQSERKAIYLEYAKNLVEKGEAYYCFCSKDR-----LDML 119

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++ +AL            + +      ++ I+    +G  Y      P + +T   D+ 
Sbjct: 120 KENAEALKRPF-------KYDKHCLHLTKEEIEANLAKGLPYVIRQNNPTTGSTTFDDVI 172

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             ++   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 173 YGKITVDNSEL---EDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGNEYLSSSP 224

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVR 423
           +   +  A         V +             K+SKR GD  +   ++ +  +    + 
Sbjct: 225 KYNRLYEAFGWD-----VPIYVHCPPIMKDTHHKLSKRNGDA-SFEDLIQKGYLKEAVLN 278

Query: 424 FMMLWRKNSELLD--FDFCKVKEQSK 447
           ++ L   N    +  F   ++ E+  
Sbjct: 279 YIALLGWNPGTNEEIFSLEELTEKFD 304


>gi|31323176|gb|AAP43521.1| ValS [Escherichia coli B]
          Length = 801

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I R  ++ L    D             +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ-MRRLGNSVDWERERFTMDEDLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|26554484|ref|NP_758418.1| glutamyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|30316162|sp|Q8EU94|SYE_MYCPE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|26454494|dbj|BAC44822.1| glutamyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 487

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 114/350 (32%), Gaps = 73/350 (20%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG  H+G  R A+          GD +  +   +  +   E      G +   L L
Sbjct: 12  APSPTGLFHIGGARTALFNYLFAKKNNGDFIVRI-EDTDIDRNVEN-----GIESQLLNL 65

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    ++ ++S L  G Y G Y++     +  + + +LL     K     + +   
Sbjct: 66  KWL-----KIFPDESPLNPGNY-GPYIQTERLPIYKEKAEQLL-----KEKKAYRCFCTP 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R   KAL        +       +      I      +  +   +       T 
Sbjct: 115 EQLEKNRK--KALKDGKTPKYNRTCLSLSEDQISEKI------KNNIPFSLRFKITDNTE 166

Query: 300 QKC-DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            K  D+ R ++   ++ +    D  +LKS+G  TY   + A      +    ++I   G 
Sbjct: 167 IKWNDIVRGEMCVPTSAL---TDPVILKSNGIPTY---NFAVVIDDNDMLISHIIR--GE 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           +H        A+  A+   K     ++   + +  D    K+SKR  +          +G
Sbjct: 219 EHLSNTPYQIAINEALDINKN----IVFGHLSVIIDETGKKLSKRNMELKQFIEDYKNMG 274

Query: 419 --------------------------SDSVRFMMLWRKNSELLDFDFCKV 442
                                     +++V+   + + +     FDF K+
Sbjct: 275 FSPEAIVNFMYLLGLSSSDNKEIFSLAEAVKNFDIKKVSKSPTTFDFKKM 324


>gi|312793434|ref|YP_004026357.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180574|gb|ADQ40744.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 817

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFREIEKKWQQKWFSQN-----KYKVSEDSPKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|311070685|ref|YP_003975608.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871202|gb|ADP34677.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 664

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 107/350 (30%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A             
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEE----------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     ++   +    L    + ++   +      + K+ +     
Sbjct: 66  ------ENITPQEYVDRAAADIQKLWKQ--LEISNDDFIRTTESRHKVVIEKVFQKLFDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   +             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDIERNEKGEV---VGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR +      DR L   + + T+                    DLA  +  ++ G     
Sbjct: 175 FRMSKY---ADRLLAFYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPG 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYLTALGFDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|298507162|gb|ADI85885.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 923

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 37/248 (14%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D+         +  G + P   K+  + +MD   + F S +                   
Sbjct: 499 DLWYEKEAAELLPPGTVCPQCGKSAFEKEMDILDVWFDSGV------------------- 539

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +  A  + + E G    +Y+ GSD   G+       +           VL    V    
Sbjct: 540 -SHAAVLENRPELGSPANMYLEGSDQHRGWFHSSLLASVGTRGVAPYREVLTHGFVV--- 595

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +    V+ + G++ +R  +  +   + +      +   ++      
Sbjct: 596 DGSGRKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQDYRDDVRISQEILTRLAE------ 649

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
              AY R R+  R       D D D+   +++P +   +     L   L      +  A 
Sbjct: 650 ---AYRRIRNTCRYLLGNLNDFDPDV---DMVPYDRMTELDRWALHQ-LEVLKEKVAAAY 702

Query: 514 IAQEPYKL 521
              E + L
Sbjct: 703 NEYEFHIL 710


>gi|15896243|ref|NP_349592.1| methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|25009386|sp|Q97EW5|SYM_CLOAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15026047|gb|AAK80932.1|AE007796_2 Methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510398|gb|ADZ22034.1| methionyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 644

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 76/484 (15%), Positives = 156/484 (32%), Gaps = 111/484 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+G+    V  D L       GY+       ++ G +I  +A             
Sbjct: 16  PSAKLHIGNTYTTVASDALVRFKRLQGYDAFMLTGTDEHGQKIQRIAED----------- 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +G  P  Y+  +   + D +  +++N   +K++    +  V+A+ KI++     
Sbjct: 65  ------KGITPKAYVDEIVAGIKDLW--KMMNISYDKFIRTTDEEHVKAVQKIVKKFYDN 116

Query: 252 LNIQ-----------HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +I             + F +E     G        ++    + Y ++      +     
Sbjct: 117 GDIYKSAYEGWYCTPCESFWTETQLVDGKCPDCGRPVEKTKEEAYFFKMSKYADRLIKYI 176

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
           +   D  Q   R   + ++  +P             DL   +  ++ G    FD  ++IY
Sbjct: 177 EDHPDFIQPESRKNEMLNNFLKP----------GLQDLCISRSSFDWGIPITFDEKHVIY 226

Query: 355 VM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----- 395
           V              GSD+   Y K   A    V +   + + +   ++ +  D      
Sbjct: 227 VWIDALSNYITALGYGSDNDELYNKFWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKQ 286

Query: 396 ---------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--------NSELLDFD 438
                       KMSK  G+ +    +++E G+D VR+ +L           N+E+    
Sbjct: 287 VFGHGWLLVDGGKMSKSKGNVVDPVVLINEFGTDPVRYYLLHEIPFGSDGLFNNEIFIKK 346

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSEL 496
                     N V       +R  ++  +  D  I P +D +     +I           
Sbjct: 347 INSDLANDLGNLV-------SRTAAMIEKYFDGSIQPPVDKEEIDNELIDMAISLPEKLD 399

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556
           + I  L + P  +              +++DL    + +      +    +V A +    
Sbjct: 400 EDIKKL-KIPEAL-------------DHIWDLIKRANKY-----IDETTPWVLAKDEN-K 439

Query: 557 MMRL 560
             RL
Sbjct: 440 KARL 443


>gi|328551739|gb|AEB22231.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328909999|gb|AEB61595.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 663

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 110/350 (31%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A             
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEE----------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     E+   +    L+   + ++   +    + + K+ +  L  
Sbjct: 66  ------ENITPQAYVDRAVAEIQKLWKQ--LDISHDDFIRTTESRHKEIIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   +             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDVERNEKGEV---VGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR +      DR L   + + ++                    DLA  +  ++ G     
Sbjct: 175 FRMSKY---ADRLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPG 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|289663732|ref|ZP_06485313.1| valyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 944

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGETYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGHTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|218192309|gb|EEC74736.1| hypothetical protein OsI_10474 [Oryza sativa Indica Group]
          Length = 602

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 108/332 (32%), Gaps = 49/332 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D +A         V      ++ G +I T A +   R  +   +
Sbjct: 72  VNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEAC-GRNPKDHCD 130

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
             S      Y       +     D    + +   + K   +V D+  + +    I R D 
Sbjct: 131 TIS----NSYK------MLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADY 180

Query: 250 KALN-IQHDIFISEDDFHRGD--PSPIRDIIDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E +       P  ++  +       +     Y+  L    +K     
Sbjct: 181 EGLYCVSCEEYKDEKELGENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNFV 240

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLK----------------SDGSYTYFAA-----D 337
                ++  Q   +S +    + R  ++                 D    Y +A     +
Sbjct: 241 RPSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISALLDDGE 300

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
            A  +   ERG+   ++++G D    + R  AV        A I+V        +     
Sbjct: 301 KASLQQAVERGWPASLHLIGKD----ILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDG 356

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +KM K  G+ +  + +V+  G D+VR+  L  
Sbjct: 357 MKMGKSLGNTLEPKDLVNRFGVDAVRYFFLRE 388


>gi|167626615|ref|YP_001677115.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082324|sp|B0TZQ5|SYI_FRAP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167596616|gb|ABZ86614.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 935

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGNQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +L+      ++I  +      +  +     E+   I  A    + + +A 
Sbjct: 660 LSNLEGFNPETDIIEFDKLVKLDQWAIAKT-KEFQDKIIEAYDKYQTHTVAQ 710


>gi|119471266|ref|ZP_01613769.1| valine tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445732|gb|EAW27015.1| valine tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 951

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 62/216 (28%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +     G+G   +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQSLYQDWEQKGYF--KPSGQGVPYSIMIPPPNVTGSLHMGHAFQDTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 62  RFKRMQGNNTLWQVGTDHAGIATQML-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   E ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 91  KLHAEEGKTRHDLGREDFINKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSE 149

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G               D +
Sbjct: 150 AVKEVFVRLHKENLIYRGKRLVNWDPKLHTAISDLE 185


>gi|319946150|ref|ZP_08020393.1| glutamate--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747679|gb|EFV99929.1| glutamate--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 486

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     EL   Y  +LL   E K          
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ELYQTYIDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +  +         +      G +    L   +S  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSEEEK------AAYVAEREAAGIIPTVRLAVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|312136597|ref|YP_004003934.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224316|gb|ADP77172.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 876

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 71/216 (32%), Gaps = 42/216 (19%)

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A++ +K    +++  +V    DG   KMSK  G+ I    V+++ G+D++R       
Sbjct: 500 CKALTGEKPFDEIVINGMV-FGEDG--HKMSKSRGNVIEPEEVLEKYGADALRLWAANSV 556

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               + F +  VK            Y Y       R+  + F  +   +F       E++
Sbjct: 557 PGSDVPFAWKDVK------------YGY----KFLRKFWNAFRFMSIHIFKEEENEVEAK 600

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV--------FHGHWSHGREN 542
            +  +  ++  L      +  +             Y+ A          +H       E 
Sbjct: 601 LNYMDRWILSKLNRLVENVTKSINQ----------YNFADAITNIQQFVWHVFCDEYIEA 650

Query: 543 PRLRFVQANNRKLTMMRLQLVHAV-ASIINSGLNII 577
            + R     N+++              ++ + L ++
Sbjct: 651 VKYRLYSDENKEMREG----AKRTLEKVLKTCLKLL 682


>gi|219684162|ref|ZP_03539106.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672151|gb|EED29204.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 480

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 120/337 (35%), Gaps = 43/337 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 G+ +  + K   + +  +        P++  +      ++  ++KI+ +     
Sbjct: 85  KTAREKGLTVYEISKFFTEAFFKDCRKLNVVYPDKVLIASKHIPNMIEVVKILEEKKITY 144

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +++     F         D+ID      +    I    ++KT          L F 
Sbjct: 145 FSNGNVYFDTSCFKSYGEMAGIDLID--KDMTFSRVDIDKFKRNKTDFV-------LWFT 195

Query: 313 STMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--YVKR 366
           ++   D     D P       + Y +  L       E   D + I++ G DH G  ++  
Sbjct: 196 NSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHHINE 250

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFM 425
           +  V   +++K   I V    L+  Y      KMSK  G+FIT++ + ++       R++
Sbjct: 251 IAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSRGNFITVKDLEEQNFSPLDFRYL 305

Query: 426 MLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAYAR 460
            L       L F F   K  + ++EN +  + Y YA 
Sbjct: 306 CLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYAS 342


>gi|29348157|ref|NP_811660.1| glutamyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569567|ref|ZP_04846977.1| glutamyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|39932183|sp|Q8A455|SYE_BACTN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|29340060|gb|AAO77854.1| glutamyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841586|gb|EES69667.1| glutamyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 504

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 99/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL+  ++ ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGEHGPYRQSERREIYKKYVQILLDN-DKAYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMSKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|83951832|ref|ZP_00960564.1| glutamyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836838|gb|EAP76135.1| glutamyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 468

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 65/413 (15%), Positives = 120/413 (29%), Gaps = 75/413 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A      G +        D          ++  
Sbjct: 5   VVTRFAPSPTGYLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRARSTPEATQAILD 61

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                  ++D ++   +        V  +L  +       F  +  +   +D +      
Sbjct: 62  GMAWLGLDHDGEVISQFDRAPRHAEVAHQLLAE-GKAYKCFASQDEIQAFRDAARAEGRS 120

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +                   +   DP+   D           Y   +  P+   T   D
Sbjct: 121 TLYQ---------------SPWRDADPASHPDA---------PYVVRIKAPRDGATTIRD 156

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH   
Sbjct: 157 EVQGDVTIRNDQLD---DMVLLRSDGTPVYM---LAVAVDDHDMGVTHVIR--GDDHLNN 208

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITLR 411
             R   +  A+              + L       K+SKR G                +R
Sbjct: 209 AARQMMIYEAMGWPLPT-----YAHIPLIHGPDGKKLSKRHGALGVEEYRDMGYPAAGMR 263

Query: 412 HVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           + +  +G           + +  +  L         FDF K++    ++       A   
Sbjct: 264 NYLARLGWSHGDDEFFTDAQAQEWFDLKGIGKSPARFDFKKLENICGQHIAITDDAALLH 323

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVI-PQESEFDTSELQLIVHLAEYPRVIENA 512
             + F  A+D     D  L       PQ  E   +          YP ++E A
Sbjct: 324 DVTAFAVAQDKVTLSDVKLSRLQAAMPQLKERAKT----------YPELLEKA 366


>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 474

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 107/309 (34%), Gaps = 44/309 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AV  D +   + F GY+VT      D   +I   A       ++ +  N+   
Sbjct: 37  HIGHARSAVAFDVMYRYLKFKGYDVTFVKNFTDVDDKIINRA------NEEGVSCNEIA- 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y G Y K + +    K        PE +         +  +++ ++D   A  +  
Sbjct: 90  --QRYIGEYYKDMYRLNIAK--------PEVEPKATEHINEIIELVRKLQDMGYAYEVNG 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++   + F           ID L        G       K     D     L  RS   
Sbjct: 140 DVYYRVEKFKDYG-KLSGKNIDELKS------GARVEINDKKENPLDF---ALWKRSKEN 189

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVA 371
                 P    +G   +     A         FD  I+  G D     H   + + EA  
Sbjct: 190 EPKWKSPW--GEGRPGWHIECSAMSMKYLGESFD--IHGGGEDLIFPHHENEIAQSEA-- 243

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
            A  +  A+  +     VR+ ++    KMSK  G+F T++ ++ +    ++R+ +L    
Sbjct: 244 -ATGKPFARYWI-HNGFVRINKE----KMSKSLGNFFTIKDILKKYDGQTLRYFLLLTHY 297

Query: 432 SELLDFDFC 440
              +DF F 
Sbjct: 298 RSPIDFSFE 306


>gi|227822152|ref|YP_002826123.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341152|gb|ACP25370.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 516

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 97/327 (29%), Gaps = 39/327 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G EV      ++ G ++   A       Q+    
Sbjct: 16  PNGKPHIGHAYELIATDAMARYQRLDGREVFFLTGTDEHGQKMQQTARKEGVSPQELADR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEK---------WLPIVKDYS 237
           N ++  +           +++   K   +   +  +   E           W  +  +  
Sbjct: 76  NSAEFEKMAEVLNASNDDFIRTTEKRHHEASQAIWIRMGEAGDLYKDSYAGWYSVRDEAY 135

Query: 238 VQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
            Q     +RDD      Q     ++ E+ +     +    ++ +                
Sbjct: 136 YQENETELRDDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHYEDNPDFIGPSERRNE 195

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC----KYE 346
           +        +   + R    +   +  D      +  D    Y  A   Y       + +
Sbjct: 196 VISFVKSGLKDLSVSRTTFDWGIRVPNDPAHVMYVWVDALTNYLTA-TGYLTDPSGPRAK 254

Query: 347 RGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
               N I+V+G D    H+ Y     A   +      +       L+         KMSK
Sbjct: 255 FWPAN-IHVIGKDIIRFHAVY---WPAFLMSAGLPLPKRVFAHGFLLN-----KGEKMSK 305

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +   ++V+  G D +R+  L  
Sbjct: 306 SLGNVVDPFNLVEHFGLDQIRYFFLRE 332


>gi|289824523|ref|ZP_06544082.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 922

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|149907707|ref|ZP_01896454.1| valine tRNA synthetase [Moritella sp. PE36]
 gi|149809377|gb|EDM69306.1| valine tRNA synthetase [Moritella sp. PE36]
          Length = 953

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 59/196 (30%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  N        +I     N TG +H+GH     + D L   
Sbjct: 6   NPQAIEQALYQNWEEQGYFKPNGDLTKDAYSIMIPPPNVTGSLHMGHAFQQTIMDALTRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  KRMQGLNTLWQVGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  + ++  + D+  ++   I R  ++ L    D          G    +
Sbjct: 95  AAEEDKTRHDYGRDAFIDKIWDWKNESGGTITRQ-MRRLGTSVDWDRERFTMDDGLSEAV 153

Query: 274 RDIIDNLARQGYVYEG 289
           +++   L ++  +Y G
Sbjct: 154 KEVFVRLFKEDLIYRG 169


>gi|56708016|ref|YP_169912.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670487|ref|YP_667044.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457097|ref|ZP_03665570.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370499|ref|ZP_04986504.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874815|ref|ZP_05247525.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820780|sp|Q5NGD0|SYI_FRATT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122970960|sp|Q14HT2|SYI_FRAT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56604508|emb|CAG45548.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320820|emb|CAL08931.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568742|gb|EDN34396.1| hypothetical protein FTBG_00275 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840814|gb|EET19250.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159204|gb|ADA78595.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 935

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 80/250 (32%), Gaps = 39/250 (15%)

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS----------DGSYTYFAADLAYFKCKYE 346
           K  +K + D  +  F +       +    KS           GS +    DL     +  
Sbjct: 494 KVAEKIEKDGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDL---DKRLS 550

Query: 347 RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              D  +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G
Sbjct: 551 YPAD--LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLG 605

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +  + + + + +G+D +R           +     ++ +++ +             R + 
Sbjct: 606 NVTSPQDIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLR 653

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
             A+ +  +LD      ++I  +      +  +     E+   I       + + +    
Sbjct: 654 NTARFLLSNLDGFNPVTDIIEFDKLVKLDQWAIAKT-KEFQDKIIEVYDKYQTHTV---- 708

Query: 526 YDLASVFHGH 535
              A + H  
Sbjct: 709 ---AQLIHHF 715


>gi|254229294|ref|ZP_04922712.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393199|ref|YP_003285053.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151938218|gb|EDN57058.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336793|gb|ACY50588.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 952

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFIRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|329121001|ref|ZP_08249632.1| glutamate--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471163|gb|EGF16617.1| glutamate--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 485

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 94/303 (31%), Gaps = 63/303 (20%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + F + +PTGP H+G  R A+          GD +  +        T+E   N  
Sbjct: 2   QKKIRVRF-APSPTGPFHIGGARSALFNWLLAKHMNGDFIVRIEDTDTVRSTKESEEN-- 58

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPG----VYLKHVGKELADK----YSSELL 222
                 +  S+ W         D   P   Y         K + ++L  +    Y+ +  
Sbjct: 59  ------IKESLKWLGLNWDEGIDVGGPHAPYRQTERLEKYKKIVEQLIKEDKAYYAYDTA 112

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
              E      +K+          ++       ++                          
Sbjct: 113 EELEASRQAQLKEGKTPVYQGYCKNLTAEEQKKY------------------------KE 148

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +G      L  P     +  DM R  + F+++ VGD +   ++KSDG   Y   + A   
Sbjct: 149 EGRKPVVRLRVPTHGVFEFDDMVRCHVEFQASGVGDFI---IMKSDGIPVY---NFAVVI 202

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
              +    ++I     +H     R  A+  A+  +           + L       KMSK
Sbjct: 203 DDIDMEITHVIR--AEEHLSNTPRQIAIYQALGHEAPVFGH-----ISLILGSDHKKMSK 255

Query: 403 RAG 405
           R G
Sbjct: 256 RHG 258


>gi|319953026|ref|YP_004164293.1| glutamyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421686|gb|ADV48795.1| glutamyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 499

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 93/290 (32%), Gaps = 44/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTG +H+G  R A+     A       ++     +  R     E YI DA    N  
Sbjct: 10  APSPTGALHIGGVRTALFNYLFAKKHNGEFILRIEDTDQNRYVEGAEQYIIDALNWCNI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D    +    G Y +   K L  +Y + LL   +  +       S
Sbjct: 69  -------------PFDEGPGKEGKFGPYRQSERKHLYKEYVNVLLEKGK-AYYAFDSSES 114

Query: 238 VQAMMKIIRDDLKAL-NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +    K   +  K      H+    ++       S +   +      G  Y         
Sbjct: 115 LDNHRKEHEEQGKTFIYNWHNRLKLDNSL-----SLMPQEVTKKIENGEEYVVRFLTAPD 169

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +  D  R  +   S ++    D+ L KSDG  TY    LA     +     ++I   
Sbjct: 170 QQIKLNDTIRGNMTIDSNVLD---DKVLYKSDGMPTYH---LANIVDDHLMEITHVIR-- 221

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +    +   + +  A   +  +   L   +  + +     K+SKR G+
Sbjct: 222 GEEWLPSLALHKQLYDAFEWQAPEFAHLPLIMKPVGKG----KLSKRDGE 267


>gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 928

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 102/317 (32%), Gaps = 39/317 (12%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  E+L+  E+ +W+P      +  M+   R D      +   +   IF  E      
Sbjct: 420 DKFRQEMLDEIEKVQWIPSWGKQRIHNMVAE-RQDWCISRQRVWGVPIPIFYCETCGETV 478

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                 D +  L  Q           K    +          FR      D+      S 
Sbjct: 479 IDDQTIDHVARLFEQHGSQVWFAREAKDLLPEGYRCRCGGDSFRKET---DIMDVWFDS- 534

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
           GS       +A  + + E  +   +Y+ GSD   G+     + A AV  +     VL   
Sbjct: 535 GSSH-----MAVLERRPELRWPADMYLEGSDQHRGWFNSSLSTAVAVKGQAPYRAVLTHG 589

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            +    DG   KMSK  G+ +    V+D +G+D +R  +               +K+ ++
Sbjct: 590 FL---LDGEGRKMSKSLGNVVDPLEVMDRLGADILRLWVASVDYRSDARVSDAILKQVAE 646

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                     Y + R+ FR         D      +    E   +     L     +  R
Sbjct: 647 ---------VYRKIRNTFRFLLGNLNGFD---PAAHRTSYEHMTELDRWAL----DQLQR 690

Query: 508 VIEN---ATIAQEPYKL 521
           ++E    A    E + +
Sbjct: 691 LVERTSAAYRNYEFHLV 707


>gi|71082864|ref|YP_265583.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762713|ref|ZP_01264678.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|84029526|sp|Q4FPA9|SYI_PELUB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71061977|gb|AAZ20980.1| Isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718515|gb|EAS85165.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 905

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 27/212 (12%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           V E I    + + +     D  Q      +++       D   +  D   T+     A+ 
Sbjct: 493 VNENIASIYEKEGSDCWFSDSPQRFLGDKYKAEDYEKISDIVEVWFDSGCTH-----AFV 547

Query: 342 KCKYE-RGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
             K E   +   +Y+ GSD   G+       +     +    ++L    V    DG  +K
Sbjct: 548 LEKREDLQWPASMYLEGSDQHRGWFHSSLLESCGTRGRAPYESILSHGFVV---DGKGLK 604

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    ++ + G+D +R  +     +E L  D+  +++ +          +Y 
Sbjct: 605 MSKSVGNVIAPEDILKKYGADILRIWVASSNYAEDLRIDYSILEQHAD---------SYR 655

Query: 460 RCRSIFR----QAKDIFPDLDFDLFPRNVIPQ 487
           + R+ FR       D F  +D +      +P+
Sbjct: 656 KIRNTFRYLLGNLNDDFQKIDLESLDIKQLPE 687


>gi|15674424|ref|NP_268598.1| glutamyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|19745375|ref|NP_606511.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|50913580|ref|YP_059552.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|71902863|ref|YP_279666.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71910017|ref|YP_281567.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94987835|ref|YP_595936.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989711|ref|YP_597811.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|139473063|ref|YP_001127778.1| glutamyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306828053|ref|ZP_07461318.1| glutamate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|54039657|sp|P67024|SYE_STRP8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|54042028|sp|P67023|SYE_STRP1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|67461686|sp|Q5XDZ4|SYE_STRP6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|118595561|sp|Q48VE5|SYE_STRPM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|122987049|sp|Q1JIQ6|SYE_STRPD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|123382560|sp|Q1JNK7|SYE_STRPC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|166226858|sp|A2RCF4|SYE_STRPG RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|13621518|gb|AAK33319.1| putative glutamyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|19747482|gb|AAL97010.1| putative glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|50902654|gb|AAT86369.1| Glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|71801958|gb|AAX71311.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71852799|gb|AAZ50822.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94541343|gb|ABF31392.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543219|gb|ABF33267.1| Glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|134271309|emb|CAM29526.1| glutamyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304429769|gb|EFM32813.1| glutamate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 481

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 94/284 (33%), Gaps = 25/284 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    +            + 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYAR--RHGGTFIIRIE-DTDRKRHVED-GERSQLENLKW 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  +  + PE +    Y +     L  +Y  +LL           K Y  +  +   R+ 
Sbjct: 66  LGMDWDESPETH--ENYRQSERLALYQQYIDQLLAEG-----KAYKSYVTEEELAAERER 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   +   +I+E  F           I      G V    L   +S   +  DM +  
Sbjct: 119 QEAAG-ETPRYINE--FIGMSADEKAKYIAEREAAGIVPTVRLAVNESGIYKWTDMVKGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F    +G   D  + K DG  TY   + A     ++    ++I   G DH     +  
Sbjct: 176 IEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GDDHIANTPKQL 228

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 229 MVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|116491711|ref|YP_811255.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118587385|ref|ZP_01544811.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|116092436|gb|ABJ57590.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118432209|gb|EAV38949.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 675

 Score = 46.1 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 102/342 (29%), Gaps = 58/342 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V+ D++A      G +V             +   L +  + + A  +
Sbjct: 16  PSGKLQLGNTYTTVLADSVARFHRALGEDVF-------FLTGTDEHGLKIQEKAEAAGKS 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               L E       L  +     DK+      + E     I K +  +    I + +   
Sbjct: 69  EMEYLDEMAVSIKKLWKLMNISYDKFIRTTDEYHERVVQHIFKKFMDEG--DIYKGNYTG 126

Query: 252 LN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  + + +E             +I   A  G+     +   K +T           L
Sbjct: 127 WYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGH----EVQLVKEETYFFKMSKYSDWL 182

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERGF------DNMIYVM---- 356
            +      +  +P  + +   + F      DLA  +  +  G        ++IYV     
Sbjct: 183 LQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWIDAL 242

Query: 357 --------------GSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
                           DH    + K   A    V ++  + + +   ++           
Sbjct: 243 SNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLPGE 302

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ +    +    G D+VR+ +L 
Sbjct: 303 VLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLR 344


>gi|330962167|gb|EGH62427.1| valyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 948

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|297624535|ref|YP_003705969.1| isoleucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165715|gb|ADI15426.1| isoleucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 1106

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 10/102 (9%)

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R     A +         ++     L  +G   KMSK  G+ +    V+D VG+D++R+ 
Sbjct: 613 REPGALAWLGPDMPAFKNVIVLGHILDENGE--KMSKSKGNIVDPWTVLDAVGADALRWY 670

Query: 426 MLWRKNSELLD-FDFCKVKEQSKE-------NPVFYVQYAYA 459
           +      E    F    V+E  ++          F+V YA  
Sbjct: 671 LYASSPPEASKRFSLALVEETQRDLFNTLWNTYSFFVLYANL 712


>gi|253699409|ref|YP_003020598.1| leucyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511544|sp|C6E100|SYL_GEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251774259|gb|ACT16840.1| leucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 824

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS + +           +         K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSAVEEKWQGYWAEHESFKATEDPTRKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARF 65

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 66  KRMQGYNV 73


>gi|209543577|ref|YP_002275806.1| isoleucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531254|gb|ACI51191.1| isoleucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 972

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 90/290 (31%), Gaps = 43/290 (14%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAADLAY 340
           V + I+   +++                    DD ++     D     GS        A+
Sbjct: 519 VMQRIVDAFRTEGADVWYSAPAARFLGEDRNPDDYEQVFDIVDVWFESGSTH------AF 572

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
              +    F   +Y+ GSD   G+ +    +  +V  +       L        D    K
Sbjct: 573 VLGRDGLPFPADLYLEGSDQHRGWFQSS--LLESVGTRGVAPYRALVTNG-FVLDEQGRK 629

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V D +G+D +R  ++    ++ L      +K+Q +          Y 
Sbjct: 630 MSKSLGNVVAPQDVNDSLGADILRLWVMNSDTNDDLRIGGEILKQQGEL---------YR 680

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-- 517
           R R+  R                  +P E   +  +  L   L E    + +A  + E  
Sbjct: 681 RLRNTLRWLLGALDGFTE----AERVPYEQMPELEQWVLHR-LTELGGQVAHAVRSHEWV 735

Query: 518 -----PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                 +         AS     +   R++       A++ +    R  L
Sbjct: 736 GLYGAIHGFC------ASDLSAFYFDVRKDAIYCD-GADSLRRRAARTVL 778


>gi|170695887|ref|ZP_02887027.1| valyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139185|gb|EDT07373.1| valyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 959

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 68/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+    + +      E              +F       N TG +H+GH     + 
Sbjct: 11  TLAKSFEPHTVEAHWGPEWEKRAYAAPAFDGNRKDFSIQLPPPNVTGTLHMGHAFNQTIM 70

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 71  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I + ++ L    D          
Sbjct: 99  IVVERQLDAKGVSRHDLGREKFVERVWEWKQESG-STITNQVRRLGASIDWSREYFTMDD 157

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 158 KMSTAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 208


>gi|308171929|ref|YP_003918634.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604793|emb|CBI41164.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 663

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 110/350 (31%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A             
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEE----------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     E+   +    L+   + ++   +    + + K+ +  L  
Sbjct: 66  ------ENITPQAYVDRAVAEIQKLWKQ--LDISHDDFIRTTESRHKEIIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   +             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDVERNEKGEV---VGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR +      DR L   + + ++                    DLA  +  ++ G     
Sbjct: 175 FRMSKY---ADRLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPG 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|253995905|ref|YP_003047969.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982584|gb|ACT47442.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 938

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  K + E  F   +Y+ GSD   G+ +       A+        +L    V    DG  
Sbjct: 558 AVLKRRPELAFPADLYLEGSDQHRGWFQSSLLTGCAIDGHAPYKALLTHGFVV---DGSG 614

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +  + V+D  G+D +R  +     S  L      +K  ++         +
Sbjct: 615 HKMSKSKGNVVAPQKVMDTYGADILRLWVASTDYSGELTISDEILKRVAE---------S 665

Query: 458 YARCRSIFRQAKDIFPDLDF--DLFPRNVIPQESEFDTSELQLIVHL 502
           Y R R+  R       D D   DL P   + +  E D   L L   L
Sbjct: 666 YRRIRNTLRFLLANLADFDATKDLLP---VSEWLEIDRYALHLTDKL 709


>gi|209548081|ref|YP_002279998.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533837|gb|ACI53772.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 963

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 89/267 (33%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL   + +       D  +  F              D+      S  ++T+   D 
Sbjct: 525 VNARILEAFEQEGADAWFADGAKERFLGNDHDHSRWKQVMDILDVWFDSGSTHTFTLED- 583

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 584 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 635

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 636 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 686

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE   ++     A 
Sbjct: 687 YRKLRNTIRWMLGTLAHDKGEEILLADLPELE-------QLMLHRLAELDELVRENYDAF 739

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 740 DFKKIARALIDFANVELSAFYFDVRKD 766



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 5/102 (4%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY+     Y+         +   +  +Y++  
Sbjct: 64  PYANGNIHIGHALNKILKDVINRSFQMRGYDA---NYVPGWDCHGLPIEWKIEEKYREKG 120

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            N D ++P   +     +          + E      E    
Sbjct: 121 RNKD-EVPVNEFRRE-CREFATGWIKTQAEEFKRLGIEGDFD 160


>gi|241203267|ref|YP_002974363.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857157|gb|ACS54824.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 963

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 89/267 (33%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL   + +       +  +  F              D+      S  ++T+   D 
Sbjct: 525 VNARILEAFEHEGADAWFAEGAKERFLGNDHDHSRWTQVMDILDVWFDSGSTHTFTLED- 583

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 584 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 635

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 636 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 686

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE   ++     A 
Sbjct: 687 YRKLRNTIRWMLGTLAHDKGEEIALADLPELE-------QLMLHRLAELDELVRENYDAF 739

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 740 DFKKIARALIDFANVELSAFYFDVRKD 766



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 5/102 (4%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY+     Y+         +   +  +Y++  
Sbjct: 64  PYANGNIHIGHALNKILKDVINRSFQMRGYDA---NYVPGWDCHGLPIEWKIEEKYREKG 120

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            N D ++P   +     +     +  + + E      E    
Sbjct: 121 KNKD-EVPVNEFRRECREFAAGWIKVQ-AEEFKRLGIEGDFD 160


>gi|82539458|ref|XP_724116.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478651|gb|EAA15681.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 882

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 69/480 (14%), Positives = 141/480 (29%), Gaps = 55/480 (11%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E   N   K     I    +   G  H+GH    ++ D +A      G ++      ++ 
Sbjct: 208 EKNINDHVKNDNFYITTAISYVNGEPHIGHAYEIILADAIARYHRNLGRDIFFTTGADEH 267

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLP---------EGYYPG------VYLKHVGKELAD 215
           G +I   AL      Q+    N              E YY          +         
Sbjct: 268 GLKIANQALRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCV 327

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +     L   E  W  + ++  +      + + +  LN      + E  +       +  
Sbjct: 328 ENGDIYLGEYE-GWYNVREETYIPENEAKLMNYIDPLNNVKLEKMKEPSYFF----RMSK 382

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
             D L +  +     + P K++      +         +        P+        Y  
Sbjct: 383 YQDRLLQYIHDNPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFTWGIPVPNDPKHVMYVW 442

Query: 336 AD--LAYFKCKYERGFDNM------IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
            D  + Y+   +    + +      I+++G D    H+     +      +S        
Sbjct: 443 MDALINYYSSCFINNQEKVKYWPADIHIIGKDIVWFHAVIFPTI-----LMSANIELPKC 497

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKV 442
           +      L  DG   KMSK   + I  + +++  GSD+ RF ++   K    + FD   +
Sbjct: 498 VFSHGFVLAGDGK--KMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNL 555

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +    +    +     R  S+                  N       +D  ++ L   +
Sbjct: 556 VDMCNSDLADTIGNLVQRTLSL--------------CILSNNAKIPPLYDDIDIDLPFCM 601

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +   IE        +K      ++    +   +      + +     N+KL ++RL L
Sbjct: 602 LHFINRIEYYMKNFHIHKFCEKTVNVCKDLNKFLTDL-APWKYKEESEKNKKLHIIRLML 660


>gi|225011521|ref|ZP_03701959.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004024|gb|EEG41996.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 876

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 54/213 (25%), Gaps = 33/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S L +          EY ++L        I     N TG +H+GH     + D +    
Sbjct: 8   DSRLVESKWYSFWQKNEYFKSLPDDREPYTIVIPPPNVTGVLHMGHMLNNSLQDIIIRRA 67

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +  +++   +    L     D  +             E  
Sbjct: 68  RMRGYNAC-------WVPGTDHASIATEAKVVAKLKAEGID--KSSLSREAFLEYAWEWT 118

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +Y                          +I + LK L    D   ++          + 
Sbjct: 119 HEYG------------------------GVILEQLKKLGCSCDWDRTKFTLDPEMSESVL 154

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G          Q    D +
Sbjct: 155 RVFIDLYNKGLIYRGFRMVNWDPEAQTTLSDEE 187


>gi|152984266|ref|YP_001346664.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150959424|gb|ABR81449.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 950

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|322375971|ref|ZP_08050481.1| glutamate--tRNA ligase [Streptococcus sp. C300]
 gi|321278921|gb|EFX55964.1| glutamate--tRNA ligase [Streptococcus sp. C300]
          Length = 486

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGIDWDESPETH--ANYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEAAGETPRYINEYLGMSEEEKATY------IAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|297618408|ref|YP_003703567.1| glutamyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146245|gb|ADI03002.1| glutamyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 484

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 92/286 (32%), Gaps = 46/286 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          G+ +  +        +R+Y           +  
Sbjct: 8   APSPTGPLHIGGARSALFNFLFAKRYGGEFIVRIEDTDLERSSRDY--------EAEIIE 59

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W             P G Y       + +   D   S    +P   +    +    +
Sbjct: 60  SLEWLGITWDEGIKVGGPNGPYRQTERLDIYQRWVDILVSTGWAYP--CFCTEEELEEER 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +    +  + L    ++  +E                    QG         P+ +  
Sbjct: 118 EQLMKQGETPRYLGRCRNLDEAERQ--------------AKLAQGLRPTIRFRVPEHRVF 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R ++ F S  +GD +   ++KSDG  TY   + A     +  G  ++I     +
Sbjct: 164 VVEDLVRGRVAFESENMGDFI---IVKSDGLPTY---NFAVVIDDHLMGITHVIR--AEE 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R   +  A+  +  +        + L       KMSKR G
Sbjct: 216 HLSNTPRQLMIYEALGLEPPKFAH-----ISLILGDDRQKMSKRHG 256


>gi|209558768|ref|YP_002285240.1| glutamyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064694|sp|B5XJN3|SYE_STRPZ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|209539969|gb|ACI60545.1| Glutamyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 496

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 94/284 (33%), Gaps = 25/284 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    +            + 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYAR--RHGGTFIIRIE-DTDRKRHVED-GERSQLENLKW 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  +  + PE +    Y +     L  +Y  +LL           K Y  +  +   R+ 
Sbjct: 66  LGMDWDESPETH--ENYRQSERLALYQQYIDQLLAEG-----KAYKSYVTEEELAAERER 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   +   +I+E  F           I      G V    L   +S   +  DM +  
Sbjct: 119 QEAAG-ETPRYINE--FIGMSADEKAKYIAEREAAGIVPTVRLAVNESGIYKWTDMVKGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F    +G   D  + K DG  TY   + A     ++    ++I   G DH     +  
Sbjct: 176 IEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GDDHIANTPKQL 228

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 229 MVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|168491595|ref|ZP_02715738.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574100|gb|EDT94628.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 486

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWIIQKKDGYPTY---NFAVAIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|325300669|ref|YP_004260586.1| Isoleucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324320222|gb|ADY38113.1| Isoleucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 1161

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 68/184 (36%), Gaps = 33/184 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + GSD +R+ M+      + L FD   V E  ++          F+  YA     +   +
Sbjct: 727 KFGSDPLRWYMITNSAPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYANVDGFTYAEK 786

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK----LAF 523
              +    + D +  +++            LI         ++      EP K    +  
Sbjct: 787 EVPVSERPEIDRWILSLLNS----------LIKD-------VDACFNDYEPTKAGRLITD 829

Query: 524 YLYD 527
           ++ D
Sbjct: 830 FVND 833


>gi|256820853|ref|YP_003142132.1| glutamyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582436|gb|ACU93571.1| glutamyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 500

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 99/287 (34%), Gaps = 40/287 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  +  Y+  A   I     
Sbjct: 7   APSPTGALHIGGVRTALFNYLFAKKHGGDFLLRI-----EDTDQNRYVEGAEQYIINSLN 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +   Y + +       P       Y +   K L  +Y+  L+N     W     D +  
Sbjct: 62  WLGLTYDEGVGKEGKHAP-------YRQSERKPLYKQYADTLINNG---WAYYAFDTA-- 109

Query: 240 AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +   R + +A        + + D           ++   L  +G  Y      P ++ 
Sbjct: 110 EALDTARKEAEAKGETFIYNWATRDALQNSLSLSKEEVQQRL-ERGDEYVIRFKMPHNEQ 168

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM R ++   ++ +    D+ L KSDG  TY    LA     +     ++I   G 
Sbjct: 169 LKMNDMIRGEVTIDTSTLD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--GE 220

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +    +     +  A   +       L  +++   +G   K+SKR G
Sbjct: 221 EWLPSMALHLLLYRAFGWQAPAFAH-LPLILKPVGNG---KLSKRDG 263


>gi|227530511|ref|ZP_03960560.1| glutamyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227349616|gb|EEJ39907.1| glutamyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 500

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 64/301 (21%), Positives = 109/301 (36%), Gaps = 40/301 (13%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + + + +PTG +H+G+ + A+     A    F+G  V R   I D   + N  
Sbjct: 1   MDDKKVRVRY-APSPTGFLHIGNAQSALFNYLFAR--HFNGTMVLR---IEDTDTKRNVK 54

Query: 178 ALSVFWRYQQALYNNDSDLPEG-------YYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                 R  + L+    D  EG       Y P    +   K +  KY  ELL+       
Sbjct: 55  DGEESQR--ENLHWLGIDWDEGPNKPNPKYAPYRQSERNKKGIYHKYIQELLDKGL---- 108

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEG 289
              KDYS +  +  +R+  +A N        E   + G      ++       +G     
Sbjct: 109 -AYKDYSTEEELAEMRERQRANN--------EAPHYDGRWYGKSKEEQKAAEAKGLKPTI 159

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
               PK    +  D+ R  + F S  +G D    + KSDG  TY   + A     +    
Sbjct: 160 RFHLPKDHEYEWNDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDI 214

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++   G+DH     +  A+  A+  +      +      ++      K+SKR  D + 
Sbjct: 215 THVLR--GADHISNTPKQIAIYEALGWEHPTFCHIPL----IFNPKTRKKLSKRDKDTLQ 268

Query: 410 L 410
            
Sbjct: 269 F 269


>gi|195582973|ref|XP_002081300.1| GD10948 [Drosophila simulans]
 gi|194193309|gb|EDX06885.1| GD10948 [Drosophila simulans]
          Length = 808

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 59/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S       +                K  +     N TG +H+GH     +
Sbjct: 58  SPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGKFVMIIPPPNVTGSLHLGHALTNAI 117

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 118 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 159

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +F  EK++  + D+  +   + I + LK+L   +D         
Sbjct: 160 -------------SRHDFGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWSRVAFTMD 205

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 206 PKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 244


>gi|189207539|ref|XP_001940103.1| glutamyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187976196|gb|EDU42822.1| glutamyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 547

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 88/289 (30%), Gaps = 42/289 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R  +          L   + 
Sbjct: 57  APSPTGYLHLGSLRTALFNYLLAKRTGGQFLLRIEDTDQKRTVH-----DAEQRLFDDLR 111

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSVQ 239
           W   Q     +   P G Y       + KE A    +  +    F   + L  + ++  +
Sbjct: 112 WAGLQWDEGPEVGGPYGPYKQSERSAIYKEHAHTLLESGNAYRCFCSTERLNALAEHRHK 171

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII-DNLARQGYVYEGILPPPKSKT 298
                I  D            S+D   +G+   IR  + D       +  G   P K + 
Sbjct: 172 L---GIATDYDRTCAVIPKEESDDRASKGESHTIRLKVPDQYPTYKDLIYGTFRPLKRRG 228

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                                 D  LLKSDG  TY    LA     +     ++I   GS
Sbjct: 229 HV--------------TESAYEDPILLKSDGLPTYH---LANVVDDHLMKITHVIR--GS 269

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +      +  A+  A               V L  D    K+SKR  D 
Sbjct: 270 EWMPSTPKHIAMYQAFGWTPPAFAH-----VGLLVDEAGNKLSKRNFDT 313


>gi|146340820|ref|YP_001205868.1| valyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193626|emb|CAL77643.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Bradyrhizobium sp.
           ORS278]
          Length = 985

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 53/191 (27%), Gaps = 32/191 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R  L          GR          I     N TG +H+GH     + D L       G
Sbjct: 45  RMSLVWEDARAFSAGRPDRRNADPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRG 104

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V  +   + AG     +                               V ++L ++  
Sbjct: 105 RDVLWQPGTDHAGIATQMV-------------------------------VERQLMERQQ 133

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   EK+L  V  +  ++   II   LK L    D          G    +  +  
Sbjct: 134 PGRREMGREKFLERVWQWKDESGGTIINQ-LKRLGASCDWGRERFTMDEGLSKAVVKVFV 192

Query: 279 NLARQGYVYEG 289
            L R G +Y+ 
Sbjct: 193 ELHRAGLIYKD 203



 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 75/236 (31%), Gaps = 36/236 (15%)

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V  K + +       S    F    W     D+        I   L     Q   +   D
Sbjct: 417 VDAKTLAQPAIAAVRSGATTFVPRNWEKTYFDWMENIQPWCISRQLW-WGHQIPAWYGPD 475

Query: 264 ---DFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCDMDRKQLLFRS-- 313
                   +   +   I     Q  +      E  L   K +     D D     F S  
Sbjct: 476 GKAFVAETEEEAVSHAIAYYVEQEVITAEQGREMALDRNKREGFITRDEDVLDTWFSSAL 535

Query: 314 ---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
              + +G   D P +K      Y+  ++         GFD +I+         V R+  +
Sbjct: 536 WPFSTLGWPDDTPEVKR-----YYPTNV------LVTGFD-IIFFW-------VARMMMM 576

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
                ++     V +  LV   RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 577 GIHFMKEVPFSTVYIHALV---RDEKGAKMSKSKGNVIDPLALIDEHGADALRFTL 629


>gi|114798244|ref|YP_760384.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738418|gb|ABI76543.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 906

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+     L         +  +        +I     N TG +H+GH     + D L 
Sbjct: 5   RFDPAEAEPRLYKAWEEAGCFHPSGDTSAQAYSIVIPPPNVTGVLHMGHALNNTLQDVLI 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V  +   + AG     +                               V +
Sbjct: 65  RFERMRGKNVLWQPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA + +++  +   E ++  V  +  ++    I   LK L    D  +       G   
Sbjct: 94  QLAQEGNTDRRSMGREAFVERVWKWKEESG-GAIVGQLKRLGASCDWSVERFTMDEGLSK 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +  +L R+  +Y            Q    D +
Sbjct: 153 AVTKVFVDLYRKKLLYRDKRLVNWDPHFQTAISDLE 188



 Score = 38.4 bits (88), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +    + +    +V +  LV    D    KMSK  G+ +    +++E G+D++
Sbjct: 517 WVARMMMMGMEFTGQVPFKDVYIHALV---LDEKGQKMSKSKGNVMDPLDLINEYGADAL 573

Query: 423 RFMMLW 428
           RF M  
Sbjct: 574 RFAMSR 579


>gi|54020408|ref|YP_115754.1| glutamyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|67461695|sp|Q601G1|SYE_MYCH2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|53987581|gb|AAV27782.1| glutamyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 467

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 93/306 (30%), Gaps = 46/306 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  +         ++       +QI  L  
Sbjct: 8   APSPTGFLHIGGARTALFNYLFAKHHNGDFILRIEDSDNSRNIKD----GEKSQIENLLW 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 ++               G Y +    E   K + EL+           K ++  
Sbjct: 64  LGIIPDEKPGSETK--------FGPYRQSEKLERYQKLAQELIK----------KGFAYY 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A       +L+          S    +  +   I D       +   +       K+K  
Sbjct: 106 AFDNQEELELQKKEQIAKGIFSFR--YDQNWLKISDQEKQKRLKNKHFVIRFKVDKAKNF 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q+ F  + + D     ++KSDG  TY   + A     ++    ++    G +
Sbjct: 164 CWNDLVRGQICFEGSAISDW---VIIKSDGFPTY---NFAVVVDDFDMEISHI--FRGEE 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A + K  +        + +  D    K+SKR              G 
Sbjct: 216 HISNTPKQIGIYQAFNWKTPKFGH-----LTIITDKNGKKLSKRDKSLFQFIEDYKNQGY 270

Query: 420 DSVRFM 425
            S  F 
Sbjct: 271 HSEAFF 276


>gi|39935971|ref|NP_948247.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|67461785|sp|Q6N5R5|SYE_RHOPA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|39649825|emb|CAE28347.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 473

 Score = 46.1 bits (108), Expect = 0.019,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 97/305 (31%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+  +   + +PTG +H+G  R A+     A                        T+ L 
Sbjct: 2   TRPVVTRFAPSPTGFLHIGGGRTALFNWLYAR-------------------KHGGTMLLR 42

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +Q       D        + +   G  +     +       E+ L   K Y   A
Sbjct: 43  IEDTDRQRSTQEAIDAILDGLKWLGIDWDGDTVYQFARAARHREVAEQLLAAGKAYRCYA 102

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +         +    + +  +   DPS     +    R       +  P   +T  
Sbjct: 103 TAEELTAMRDKARAEGRAKLYDGSWRDRDPSEAPAGVKPTIR-------LKAPLTGETVI 155

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  +       +     D  LL+ DG+ TY    LA     ++ G  ++I   G DH
Sbjct: 156 EDQVQGRVAWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R + +  A+  +   + V+    +    DG   K+SKR G           +G D
Sbjct: 207 LINAARQKQIYDAMEWE---LPVMAHIPLIHGPDG--SKLSKRHG----------ALGVD 251

Query: 421 SVRFM 425
           + R M
Sbjct: 252 AYRAM 256


>gi|289678200|ref|ZP_06499090.1| valyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 397

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|254719073|ref|ZP_05180884.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984063|ref|ZP_06096798.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838355|ref|ZP_07471200.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662655|gb|EEZ32916.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406495|gb|EFM62729.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 515

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     +R        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDKRWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|257067132|ref|YP_003153388.1| glutamyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256799012|gb|ACV29667.1| glutamyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 493

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 108/303 (35%), Gaps = 49/303 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  R  ++  A   +  L  
Sbjct: 9   APSPTGYLHIGGLRTALFNYLYARHTGGDMLLRI-----EDTDRTRFVEGA---LENLLK 60

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIV 233
           ++ W      +  + + + ++ +    G Y++    E  + DKY  +L+   +  +    
Sbjct: 61  ALKWSGIEIDEGVMLDENGEVTQKGDCGPYIQSERVEEGIYDKYIDQLIEEGK-AYYCFC 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  +    R D   L  ++D              P+ +    +A  G  +   L  
Sbjct: 120 SQERIDKVRDQQRAD--GLTPKYDGLCR--------SIPLEEAKKRVAA-GEPHTVRLKL 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P ++     D  + ++ F +    D  D+ L+K DG  TY     A     +  G  ++ 
Sbjct: 169 PVNRDITFNDKIKGKITFNTD---DQDDQVLIKRDGFPTYHF---AVVVDDHLMGITHV- 221

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G +      +   +  A   K  +        +    +    K SKR GD + +   
Sbjct: 222 -VRGDEWVSSTPKHVYLYEAFGWKAPEYIH-----LPTVLNKDHKKYSKRNGDGM-VEDF 274

Query: 414 VDE 416
           ++E
Sbjct: 275 IEE 277


>gi|253752675|ref|YP_003025816.1| glutamyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754501|ref|YP_003027642.1| glutamyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756434|ref|YP_003029574.1| glutamyl-tRNA synthetase [Streptococcus suis BM407]
 gi|187649799|sp|A4W496|SYE_STRS2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|251816964|emb|CAZ52613.1| glutamyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818898|emb|CAZ56741.1| glutamyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820747|emb|CAR47509.1| glutamyl-tRNA synthetase [Streptococcus suis P1/7]
          Length = 484

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLFARHHGGTFLIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  +LL   E K          
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +            I      G V    L   ++  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSE------DEKTAYIAEREAAGIVPTVRLAVNEAGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ + ++ F    +G   D  + K DG  TY   + A     Y     ++I   G 
Sbjct: 166 YKWNDIVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVIDDYLMKISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|304321152|ref|YP_003854795.1| valyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300054|gb|ADM09653.1| valyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 891

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 54/185 (29%), Gaps = 32/185 (17%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
                        G+G    I F   N TG +H+GH   A + D L       G  V  +
Sbjct: 24  YAAWEAAGCFRPSGEGEPYAIVFPPPNVTGRLHMGHALNATLQDILIRYNRMRGKNVLWQ 83

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
              + AG     +                               V ++LA +   +    
Sbjct: 84  VGTDHAGIATQMM-------------------------------VERQLAAENQPDRHTL 112

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
               +L  V  +  ++    I+D ++ L    D          G    +R+    L ++G
Sbjct: 113 GRAAFLERVWAWKEESG-GAIQDQMRRLGASCDWTRERFTMDEGLSLAVRETFVRLYKEG 171

Query: 285 YVYEG 289
            +Y  
Sbjct: 172 LIYRD 176


>gi|307704594|ref|ZP_07641498.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
 gi|307621851|gb|EFO00884.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
          Length = 665

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G D   +    +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWFDALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +++  G D +R+ ++ 
Sbjct: 290 DIKLPERLIGHGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMR 338


>gi|292670469|ref|ZP_06603895.1| glutamate-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647879|gb|EFF65851.1| glutamate-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 474

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 86/289 (29%), Gaps = 44/289 (15%)

Query: 136 MHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           MH+G+ R A+     A       ++     +  R  Y+ DA   I     +        +
Sbjct: 1   MHIGNLRTALYAWLFARANDGTFILRIE--DTDRSRYVADAVEFIRRTLDAA------GI 52

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
             ++     G   G Y++    E+  KY+ +L+            +++ +A         
Sbjct: 53  VPDEGPDGIGGDYGPYVQSERMEIYKKYAEQLVESG--HAYRCFCNHTEEAAPADGEKSF 110

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                               P  I+  +D     G  Y      P    T   D+    +
Sbjct: 111 GGYPRTCREL---------SPEEIQAHLDR----GDAYVIRQKMPLVGETTFYDVLHGNV 157

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
              +  +    D+ LLK DG  TY   + A     +     ++I       + ++     
Sbjct: 158 TIPNAEL---EDQVLLKRDGMPTY---NFANVIDDHLMKVSHII-----RGTEFITSTPK 206

Query: 370 VA---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                 A          L   + R    G   K+SKR G   +   +V 
Sbjct: 207 HVLLYEAFGWTPPVFVHLAPVMGRDDATGKTSKLSKRHG-ATSFDDLVK 254


>gi|292670061|ref|ZP_06603487.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648249|gb|EFF66221.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 513

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 97/324 (29%), Gaps = 37/324 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A     +G +V      ++ G +I   A        Q +  
Sbjct: 16  PSAKLHIGHAYCTTVADTIARFKRLAGCDVFFLTGSDEHGQKIQQAAEKEGVTPLQYVDR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMK 243
             +   E     G     +++       +   +      ++  +        Y       
Sbjct: 76  IVAGFQELWRLLGISYDDFIRTSEPRHYELVQNIFQQIYDQGDIYKGAYKGLYCTPCESY 135

Query: 244 IIRDDLKALNIQHDIF-----ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +  L       D       ++E+ +          +I  +       + +    +   
Sbjct: 136 WTKLQLDENGCCPDCHRPVQEVAEEAYFFRMSKYADRLIAYINEHPDFIQPVSRRNEMIA 195

Query: 299 TQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             +  ++   +   S   G     D      +  D    Y    + Y   K +  F    
Sbjct: 196 FIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLTP-IGYLHDKEK--FSKY- 251

Query: 354 YVMGSDHSG--------YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               +D           +      +  A+     +    +     L  DG   KMSK  G
Sbjct: 252 --WPADVHLVGKEIVRFHTIIWGCMLMALGLDLPK---KVYGHGWLIVDGA--KMSKSVG 304

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +    +++E G+D+VR+ +L  
Sbjct: 305 NVVDPIALIEEFGADAVRYFLLRE 328


>gi|194883432|ref|XP_001975805.1| GG20362 [Drosophila erecta]
 gi|190658992|gb|EDV56205.1| GG20362 [Drosophila erecta]
          Length = 1049

 Score = 45.7 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 58/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP ++     S       +                K  +     N TG +H+GH     +
Sbjct: 95  SPRFVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGKFVMIIPPPNVTGSLHLGHALTNAI 154

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 155 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 196

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I + LK+L   +D         
Sbjct: 197 -------------SRHDLGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWTRVAFTMD 242

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 243 PMLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 281


>gi|307747746|gb|ADN91016.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 628

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 98/324 (30%), Gaps = 46/324 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + +D            + E+ +          I+     +              +V  
Sbjct: 134 SQLINDCSCPDCGKNTTILKEESYFFKLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA---DLAYFKCKY 345
           G+     ++T+    +   Q       + DD     +  D  + Y ++          K+
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EINDDKHIIYVWLDALFIYISSLDFQSKGENAKF 247

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                ++I   G D    + R  A+          + +        +      KMSK  G
Sbjct: 248 WPAHVHLI---GKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKG 300

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +  + VVD  GS++ R+ +L  
Sbjct: 301 NVVKPKEVVDAYGSEAFRYFLLRE 324


>gi|281417043|ref|ZP_06248063.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281408445|gb|EFB38703.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 875

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 74/268 (27%), Gaps = 40/268 (14%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           ++P+ +   L +  +    +   +  + T   I     N TG +H+GH     + D L  
Sbjct: 1   MTPNRVEDRLYAEWMEKGYFHAEIDKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIR 60

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GY     +      A I T A  V    ++ +   D                  E
Sbjct: 61  WKRMQGY--CTLWLPGTDHASIATEAKIVEAMAKEGITKEDI-------GREKFLERAWE 111

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               Y                           I + LK L    D          G    
Sbjct: 112 WKRHYGGR------------------------IVEQLKKLGCSCDWQRERFTMDEGLSRA 147

Query: 273 IRDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL 325
           + ++   L ++G +Y G            S +  + + + K   F        D D  ++
Sbjct: 148 VIEVFVRLYKKGLIYRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPVKDSDEFVV 207

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 208 VATTRPETMLGDTAVAVHPEDERYKHLI 235



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        + +      ++  +   +      + 
Sbjct: 462 TEDLKYFYPTDVLVTGYD-IIFFWVAR------MIFSALEHTGKEPFKYVFIHG----IV 510

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSK 447
           RD +  KMSK  G+ I    ++D+ G+D++RF + +       L F   K +    
Sbjct: 511 RDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 566


>gi|84488913|ref|YP_447145.1| methionyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|121725522|sp|Q2NI31|SYM_METST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|84372232|gb|ABC56502.1| MetG [Methanosphaera stadtmanae DSM 3091]
          Length = 676

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 60/442 (13%), Positives = 129/442 (29%), Gaps = 85/442 (19%)

Query: 130 ANPTGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
               GP H+GH R   +  D  A     +G +       ++ G  I   A     +  + 
Sbjct: 11  PYANGPCHLGHLRSTYIPADIYARYNRMTGVDTLMVCSTDEHGTPIAVRAEQ-EKKNPKD 69

Query: 189 LYNNDSDLPEGYYP------GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           + +   ++              + +   +          L+   + +  I +    Q   
Sbjct: 70  ITDIYHEIIGNDLKSCNISLDSFRRTTDEIHYKMAQDFFLDLYNKGY--IYEKVIDQLYC 127

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPI-------RDIID----------------- 278
              +  L    ++      E +  RGD   +        D+++                 
Sbjct: 128 DECKRSLPDRYVEGTCPYCESEGARGDQCEVCGRHLNPTDLVEPHCLICDSTPHIEQSKQ 187

Query: 279 ---NLAR-----QGYVYEGILPPPKSKT-TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
               L       + ++      P   K   ++   D  +    +  +   +  PL  ++G
Sbjct: 188 YYFKLHEFEQPLKEWINSNEHLPKNVKNFAKEWLNDGLKDWIMTRDMNWGIPVPLNDAEG 247

Query: 330 SYTYFAADL--------AYFKCKYERGF-----DNMIYVMGSDHSGYVKRLE-AVAAAVS 375
              Y  A+         A +  K++  +     D  ++ +G D   +      ++     
Sbjct: 248 KVLYVWAEAFEGYQSSAASWANKHDLDWKEYWDDKTVHFIGKDIIYHHTLFWPSMLMGRG 307

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SEL 434
                  V    L    R     KMS   G  I +   + +  SD +R+ M+     ++ 
Sbjct: 308 WNLPYSVVGGGYLSLEGR-----KMSTSKGWVIWVEDFLKKFDSDLLRYYMVINAPLNKD 362

Query: 435 LDFDFC----KVKEQSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQES 489
            DF +     +V  +  +N   ++   +      F  +  ++    D D           
Sbjct: 363 TDFSWDDFQRRVNNELTDNLGNFIHRTFTFTNKFFDGKIPEMGSYTDED----------K 412

Query: 490 EFDTSELQLIVHLAEYPRVIEN 511
           EF+     L       P V+ N
Sbjct: 413 EFEEKIKAL-------PDVVAN 427


>gi|148259647|ref|YP_001233774.1| isoleucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401328|gb|ABQ29855.1| Isoleucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 942

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 37/234 (15%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +Y+ GSD   G+ +    +  AV  +  A    ++ +   L   G   KMSK  G+    
Sbjct: 570 LYLEGSDQHRGWFQAS--LLEAVGTRGTAPFKAIVTDGFVLDEQGR--KMSKSLGNVTAP 625

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           + V+D+ G+D +R  ++       L      +K+Q+           Y R R+  R    
Sbjct: 626 QQVIDQYGADILRLWVMNSDIHNDLRIGKDILKQQADL---------YRRIRNTLRWVLG 676

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ-------EPYKLAF 523
                  D F        ++    E  ++  L+    ++  A             ++   
Sbjct: 677 -----GLDGFTEAEAMPAADMPDLERYVLHRLSRLDAMLRRAVETHDWTGVYPAIHQFCN 731

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
                 +     +   R++     V+ +       RL           + L+I+
Sbjct: 732 ------NDLSAFYFDIRKDALYCDVRLDAEG----RLVAQSETRRACRTVLDIL 775



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 62/205 (30%), Gaps = 42/205 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    +  D +      +G++     Y+         +   V   Y++A 
Sbjct: 65  PYANGNLHIGHALNKIHKDLINRARQMAGFDA---NYVPGWDCHGLPIEWKVEEGYRKAG 121

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +                                +DY+ Q  + +  ++ 
Sbjct: 122 KNKD-EVPILEFRRE----------------------------CRDYA-QHWLDVQAEEF 151

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP---------PPKSKTTQ 300
           K L ++ D             + I   I   A  G +Y G+ P                +
Sbjct: 152 KRLGVEGDWANRYATMDFASEAAIAAEIHKFAASGALYRGLRPVMWSPVEKTALAEAEVE 211

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLL 325
             D     +  R  +VG D+D   +
Sbjct: 212 YQDRRDTAIWVRFPVVGGDLDGAAI 236


>gi|289167061|ref|YP_003445328.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Streptococcus
           mitis B6]
 gi|288906626|emb|CBJ21460.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Streptococcus
           mitis B6]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 101/296 (34%), Gaps = 49/296 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDY 236
                R+    ++   +  E Y     L     +L  KY  +LL   +  + ++   +  
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----DLYQKYIDQLLAEGKAYKSYVTEEELA 113

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           + +   +   +  + +N    +   E   +          I      G +    L   +S
Sbjct: 114 AERERQEAAGETPRYINEYLGMSKEEKAAY----------IAEREAAGVIPTVRLAVNES 163

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
              +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   
Sbjct: 164 GIYKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR-- 216

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           G DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 217 GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|256425193|ref|YP_003125846.1| valyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040101|gb|ACU63645.1| valyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 881

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 55/218 (25%), Gaps = 35/218 (16%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N    P+          +    Y R+         I     N TG +H+GH     V D 
Sbjct: 6   NFT--PAAAEGKWYQHWMDK-GYFRSKPDNRPPFTIVIPPPNVTGVLHMGHTLNETVQDI 62

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L      SGY               +  +++   +    L               +LK+ 
Sbjct: 63  LVRRARMSGYNTC-------WVPGSDHASIATEAKVVNMLKTEKGIEKSQLTREEFLKY- 114

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E  DKY                          II + +K L    D            
Sbjct: 115 AFEWKDKYG------------------------GIIYNQIKKLGCSCDWDRVTFTMDDHY 150

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              +  +  +L  +G +Y G          +    D +
Sbjct: 151 YQAVIKVFVDLYGKGLIYRGARMINWDPKAKTALSDEE 188



 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 9/144 (6%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+         +K   +V    +V   RD    KMSK+ G+   L  ++D+ G+D+V
Sbjct: 505 WVARMIMAGQEYRNEKPFSDVYFTGMV---RDKQGRKMSKQLGNSPDLLELIDKYGADAV 561

Query: 423 RF-MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           R+ +M+       L FD     E   +             + +     +   D +  +  
Sbjct: 562 RYGIMISSPAGNDLLFD-DAALELGSKFSNKIW----NALKLVKMWEANTAGDANAAVDH 616

Query: 482 RNVIPQESEFDTSELQLIVHLAEY 505
             V   ES  +  ++QL    A++
Sbjct: 617 FAVRWFESRLNEVKVQLAEEFADF 640


>gi|205355207|ref|YP_002229008.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207859601|ref|YP_002246252.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|205274988|emb|CAR40062.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|206711404|emb|CAR35783.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|326630365|gb|EGE36708.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|168464643|ref|ZP_02698546.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|195632560|gb|EDX51014.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|268554334|ref|XP_002635154.1| C. briggsae CBR-VRS-1 protein [Caenorhabditis briggsae]
          Length = 931

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 107/323 (33%), Gaps = 45/323 (13%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     V D +       G +V+                   F+  +   
Sbjct: 6   PNVTGKLHLGHALTVAVEDAICRHQRNQGNKVS-------------------FFCAKVFF 46

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           Y+    +P   + G+  + V +++  K      +   +++L     +S +     IR  L
Sbjct: 47  YSQAEWIPGFDHAGIATQVVVEKMLAKRGRRRQDMSRKEFLDECHKWS-EKCSSEIRHQL 105

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             +    D   +           +      L ++G +  G        T           
Sbjct: 106 TRMGASLDWTQNYYTLDPKFSEAVTKAFCTLEKEGLITRGKRMVHWCPT----------- 154

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYERGFDNMI-Y-VMGSDHSGYVKR 366
              ST+   +VDR  + ++   TY    LA   K K + G  ++I Y ++ S  S Y++ 
Sbjct: 155 -LSSTLSSQEVDRVDVPTN---TYINVPLANGLKRKVKFGQMHLIRYQLVDSSDSEYIEV 210

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK--MSKRAGDFITLRHVVDEVGSDSVRF 424
                  +    A       +              M  R    IT   V  E G+ +V+ 
Sbjct: 211 GTTRPETLFADVAIAVHPEDDRYTKLHGKQVWSPVMPGRKLLVITDSAVSIEKGTGAVKI 270

Query: 425 MMLWRKNSELLDFD-FCKVKEQS 446
                 + + LD++ + + K Q+
Sbjct: 271 ----TPSHDPLDYEIWNRWKLQN 289


>gi|16767720|ref|NP_463335.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167991264|ref|ZP_02572363.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|81520710|sp|Q8ZK31|SYV_SALTY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16423040|gb|AAL23294.1| valine tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|205330315|gb|EDZ17079.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261249563|emb|CBG27430.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996819|gb|ACY91704.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160959|emb|CBW20493.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915572|dbj|BAJ39546.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321222554|gb|EFX47626.1| Valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323132812|gb|ADX20242.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332991284|gb|AEF10267.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|291550033|emb|CBL26295.1| glutamyl-tRNA synthetase, bacterial family [Ruminococcus torques
           L2-14]
          Length = 485

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 129/389 (33%), Gaps = 52/389 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D    +   L +      + 
Sbjct: 10  APSPTGRMHVGNLRTALYAYLIA---KHEGGDFLLRVEDTDQERFVEGALDIIYRTMEKT 66

Query: 188 ALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L +++    +G Y G Y++       L  KY+ +L+   +  +        ++++   +
Sbjct: 67  GLIHDEGPDKDGGY-GPYVQSERNASGLYLKYAKQLVEQGD-AYYCFCDKERLESLKTQV 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    +++     +S            ++ ++     G  +   L  P    T   D  
Sbjct: 125 SESGVEISVYDKHCLSLS----------KEEVEANLAAGKPWVIRLNVPNEGETTFHDEI 174

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   +  +    D  L+KSDG  TY   + A     +     ++  V G+++     
Sbjct: 175 YGDITVPNAELD---DMILIKSDGFPTY---NFANVIDDHLMEISHV--VRGNEYLSSAP 226

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVR 423
           +   +  A   +     V +     L  D    K+SKR G   +   ++++  V    V 
Sbjct: 227 KYNRLYEAFGWE-----VPVYVHCPLITDENHKKLSKRCGHS-SYEDLIEQGYVSEAVVN 280

Query: 424 FMMLWR--KNSELLDFDFCKVKEQSKENPVFYVQYAYARCR-------SIFRQAKDIFPD 474
           ++ L           F   ++ E           Y +            +     +    
Sbjct: 281 YVALLGWCPTDNREIFSLEELVEAFD--------YHHMSKSPAVFDTVKLKWMNGEYLKA 332

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +DFD F     P   E  T +  L   +A
Sbjct: 333 MDFDKFYALAEPYLKEAVTKDYDL-KKIA 360


>gi|257457848|ref|ZP_05623007.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444561|gb|EEV19645.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 487

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 64/319 (20%), Positives = 105/319 (32%), Gaps = 46/319 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  DTL+ L+ F GY VT    I D G                A    D  +
Sbjct: 38  HIGNLRAYVFQDTLSRLLRFLGYPVTHVMNITDIG-----------HLSGDADDGEDKMV 86

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-VQAMMKIIRDDLKALNIQ 255
                 G  +  +       +  +       +   + K    VQ M+++I+         
Sbjct: 87  KTAKERGQSVLEIADFYTKAFFKDTERLNIRRPDVVCKATDHVQDMIELIKRIEAN---G 143

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LL 310
           H      + ++          I    + G +    L   K+    + D +++      L 
Sbjct: 144 HTYSAGGNLYYD---------IMTFPKYGELASIKLEDLKAGARIEVDENKRNPHDFVLW 194

Query: 311 FRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH--SGYVK 365
           F  +   +     D P  +  G   +     A         FD  I+  G DH    +  
Sbjct: 195 FTKSKFENQALVWDSPWGR--GYPGWHIECSAMSMKYLGEQFD--IHTGGIDHIRIHHTN 250

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV--R 423
            +     A  +K  +  +    LV         KMSK  GDFITL  V+ E G   +  R
Sbjct: 251 EIAQSEGATGKKWVKYWLHNEFLVM-----NKGKMSKSTGDFITLDKVI-EAGYAPLDYR 304

Query: 424 FMMLWRKNSELLDFDFCKV 442
           F++L       L F +  +
Sbjct: 305 FLLLGGHYRTQLTFSWEAM 323


>gi|303286673|ref|XP_003062626.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456143|gb|EEH53445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 967

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 55/196 (28%), Gaps = 37/196 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +             +   +     K  +     N TG +H+GH     + DT+   
Sbjct: 6   NPAGVEAGWYEWWEREGYFKPTMGSSKPKFVVVIPPPNVTGALHIGHALTNSIQDTIVRW 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGYE       + AG    T+                               V K+L
Sbjct: 66  RRMSGYEALWVPGTDHAGIATQTV-------------------------------VEKKL 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +          EK+L        +A    I + LK L    D               +
Sbjct: 95  AREEGITRHELGREKFLE------REAYGGKIFNQLKRLGSSLDWSRERFTMDDMLSKAV 148

Query: 274 RDIIDNLARQGYVYEG 289
           ++    +  +G VY  
Sbjct: 149 KEAFVRMHAEGLVYRD 164


>gi|225677273|ref|ZP_03788256.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590693|gb|EEH11937.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 838

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 35/217 (16%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K +        ++  +  GK  K  +  +   P+G +H+GH R   +GD +A     +G+
Sbjct: 6   KSVEKFYQDKWDFSVSKSGKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGF 65

Query: 160 EV---------------------------TREYYINDAGAQINTLALSVFWR------YQ 186
           EV                           T+E  I++   Q+ ++ LS  W         
Sbjct: 66  EVLHPIGWDAFGLPAENAARDNNISPETWTKEN-IDNMRTQLKSIGLSYNWERELSTCEP 124

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
               +      +    G+  +       D     +L   +       +  +V    K+ +
Sbjct: 125 DYYKHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLSQ 184

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             LK  +   D+        +  P  ++ + +    +
Sbjct: 185 WFLKITDFAEDLLKCLQSL-KNWPEKVKTMQERWIGK 220


>gi|195013564|ref|XP_001983862.1| GH16130 [Drosophila grimshawi]
 gi|193897344|gb|EDV96210.1| GH16130 [Drosophila grimshawi]
          Length = 991

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 55/195 (28%), Gaps = 38/195 (19%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +   +          +   K     +     N TG +H+GH   A V D +A   
Sbjct: 46  PKQVEQAYWTREEQQTATQSSSTCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQH 105

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY V      + AG  I T A+                             V + LA
Sbjct: 106 RQLGYNVEWVPGTDHAG--IATQAV-----------------------------VERTLA 134

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD---PS 271
                       E +L  V  +  +     I  DLK L         E ++   D     
Sbjct: 135 ATKGQTRQEIGREAFLDEVWKWKAEKG-AGIVQDLKQLG---CTLNWEREYFTMDKQQAD 190

Query: 272 PIRDIIDNLARQGYV 286
            +    + L  +G +
Sbjct: 191 AVNVAFERLFDEGLI 205


>gi|197264358|ref|ZP_03164432.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198246120|ref|YP_002218339.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|197242613|gb|EDY25233.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197940636|gb|ACH77969.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326626147|gb|EGE32492.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|126632628|emb|CAM56332.1| novel protein similar to vertebrate valyl-tRNA synthetase 2-like
           (VARS2L) [Danio rerio]
          Length = 861

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 58/217 (26%), Gaps = 37/217 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-----ANPTGPMHVGHCRCAVVGD 148
           SP Y+             +      K      +  S      N TG +H+GH     + D
Sbjct: 31  SPEYVDFGWYQWWEKQEFFSPEQHSKQPHAVNKHFSLCIPPPNVTGTLHLGHALTVAIED 90

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA      GY+V      + AG        SV  R                        
Sbjct: 91  ALARWRRMQGYKVLWVPGCDHAG----IATQSVVERK----------------------- 123

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
               L  +      +F  E++L  V  +  +     I   L+ L    D   +       
Sbjct: 124 ----LLREQGKSRQDFSREEFLKQVWMWKNEKG-DEIYHQLRKLGASLDWSRACFTMDPA 178

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             S + +    L   G +Y        S T +    D
Sbjct: 179 FSSAVTEAFVRLCDSGLIYRAEGLINWSCTLESAISD 215


>gi|107103354|ref|ZP_01367272.1| hypothetical protein PaerPA_01004423 [Pseudomonas aeruginosa PACS2]
          Length = 950

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|90412466|ref|ZP_01220469.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90326503|gb|EAS42909.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 19/173 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  +
Sbjct: 569 LYLEGSDQHRGWFQSSLISSVAMKGKAPYNQVLTHGFVV---DGQGRKMSKSVGNVVAPK 625

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 626 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FF 673

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHL-AEYPRVIENATIAQEPYKLAF 523
             +L+      +++  E         +   + A+    I  A      + +  
Sbjct: 674 LANLNGFNPETDLVAPEDMVALDRWAVGRAMEAQ--EEIIKAYDEYNLHGVTQ 724


>gi|326403384|ref|YP_004283465.1| isoleucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050245|dbj|BAJ80583.1| isoleucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 942

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 37/234 (15%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +Y+ GSD   G+ +    +  AV  +  A    ++ +   L   G   KMSK  G+    
Sbjct: 570 LYLEGSDQHRGWFQAS--LLEAVGTRGTAPFKAIVTDGFVLDEQGR--KMSKSLGNVTAP 625

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           + V+D+ G+D +R  ++       L      +K+Q+           Y R R+  R    
Sbjct: 626 QQVIDQYGADILRLWVMNSDIHNDLRIGKDILKQQADL---------YRRIRNTLRWVLG 676

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ-------EPYKLAF 523
                  D F        ++    E  ++  L+    ++  A             ++   
Sbjct: 677 -----GLDGFTEAEAMPAADMPDLERYVLHRLSRLDAMLRRAVETHDWTGVYPAIHQFCN 731

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
                 +     +   R++     V+ +       RL           + L+I+
Sbjct: 732 ------NDLSAFYFDIRKDALYCDVRLDAEG----RLVAQSETRRACRTVLDIL 775



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 62/205 (30%), Gaps = 42/205 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    +  D +      +G++     Y+         +   V   Y++A 
Sbjct: 65  PYANGNLHIGHALNKIHKDLINRARQMAGFDA---NYVPGWDCHGLPIEWKVEEGYRKAG 121

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +                                +DY+ Q  + +  ++ 
Sbjct: 122 KNKD-EVPILEFRRE----------------------------CRDYA-QHWLDVQAEEF 151

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP---------PPKSKTTQ 300
           K L ++ D             + I   I   A  G +Y G+ P                +
Sbjct: 152 KRLGVEGDWANRYATMDFASEAAIAAEIHKFAASGALYRGLRPVMWSPVEKTALAEAEVE 211

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLL 325
             D     +  R  +VG D+D   +
Sbjct: 212 YQDRRDTAIWVRFPVVGGDLDGAAI 236


>gi|302390850|ref|YP_003826670.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202927|gb|ADL11605.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 644

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 104/326 (31%), Gaps = 41/326 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL-----------S 180
           P   +H+GH       DT+       GYE       ++ G ++   A             
Sbjct: 15  PNDKLHIGHTYTTTAADTVVKFKELQGYETELITGSDEHGQKLQKTAEEHGMEPLGYIDG 74

Query: 181 VFWRYQQALYNNDSDLPEGYY-----PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           +   +++     + D  E            ++H+ K++ DK      +  E  +    + 
Sbjct: 75  IVKTFKELWSTLEVDYTEFVRTTSQEHKKDVQHIFKKIYDK-GDIYKDKYEGYYCTPCET 133

Query: 236 YSVQAMMKIIRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           Y  +        +L       D      ++ E+ +          +++ L       +  
Sbjct: 134 YWAE-------RELDEEGNCPDCNRPVEWVEEESYFFKMSEYEEQLLEFLDDNPDFIQPA 186

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGD----DVDRPLLK-SDGSYTYFAADLAYFKCKY 345
               +     +  ++   +   S   G     D D  +    D   +Y    + + + + 
Sbjct: 187 KRRNEMINFIEEGLEDLCVSRTSFDWGIPVPIDGDHVIYVWFDALISYLTG-IGFRRDED 245

Query: 346 ERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           + G      ++++G D    + R   +        A + +        +      KMSK 
Sbjct: 246 KFGSYWPADVHIVGKD----ILRFHTIIWPAILMAADMELPKQVFGHGFLTVEGGKMSKS 301

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ +    +V++ G D+VR+ ++  
Sbjct: 302 KGNVVDPTKLVNDFGVDAVRYYLMRE 327


>gi|257487395|ref|ZP_05641436.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|269120241|ref|YP_003308418.1| valyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614119|gb|ACZ08487.1| valyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 883

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 65/244 (26%), Gaps = 33/244 (13%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  + +    +      +      +    +I     N TG +H+GH     + DT+   
Sbjct: 9   SPKEIEEKWYKVWEENGYFSAQHNDEKPGYSIVIPPPNVTGILHMGHILNNSIQDTMIRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG++       + AG  I T      W  ++     +                  E 
Sbjct: 69  KRMSGFDALWMPGTDHAG--IATQNKVEKWLMEEGTTKEEI-------GREKFLERTWEW 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +K+                          II   L+ L    D          G    +
Sbjct: 120 KEKHG------------------------GIITKQLRRLGSSLDWKRERFTMDEGLSDAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           +D+   L     +Y+G          +    D +      T     +  P+  SD S T 
Sbjct: 156 KDVFIRLYNDDLIYKGEYIVNWCPKDKTALADDEIEHEEVTGKIWQIKYPVKDSDESLTI 215

Query: 334 FAAD 337
               
Sbjct: 216 ATTR 219



 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 111/359 (30%), Gaps = 75/359 (20%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +            +   + SED         +   ++   +Q     
Sbjct: 394 WLENIRDWCISRQLWW--------GHRIPAYYSED-----GTIFVAKSLEEAKQQAKEKY 440

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS-YTYFAADLAYFKCKYER 347
           G     + +T         QL   STM   +  +   K   +     AAD+ +F      
Sbjct: 441 GKEVELREETDVLDTWFSSQLWPFSTMGWPEKTKDFEKFFPTDALVTAADIIFFWVS--- 497

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               MI +            E +   +  K   +N        + RD    KMSK  G+ 
Sbjct: 498 ---RMIMI-----------SEYLFDEIPFKYVYLN-------GIVRDEKGRKMSKTLGNS 536

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
                ++D+ G+D++RF +L+  +     F   K+ E                  S    
Sbjct: 537 PDPLDLIDKYGADAIRFSLLYNTSQGQDIFFSEKLLEMG-------------ANFSNKVW 583

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
               F   + + F       + EF   +  ++  L    + + NA    E         D
Sbjct: 584 NASKFVLQNLEDFDYKTSISDLEFKLEDRWILSKLQNAAKGVNNALDGYE--------LD 635

Query: 528 LA---------SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +A           F   +    E  + R    + +     +  L      I+++GL ++
Sbjct: 636 MAAKTAYEFFRGEFCDWY---VEAAKTRVYGGDEQDKKTAQWVL----RHILDNGLKLL 687


>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 479

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 72/403 (17%), Positives = 133/403 (33%), Gaps = 66/403 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R + V D +   + F GY VT                             N +D+
Sbjct: 37  HIGHARSSGVFDVIRRYLMFKGYNVT--------------------------FVKNFTDI 70

Query: 197 PEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            +        K +   ELA  + +E     +   L I++          I+       IQ
Sbjct: 71  DDKIIKRSNEKQMDWRELAANFIAEHDADMDS--LNILRPDHTPKATDYIKQM-----IQ 123

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLF 311
               + E  F       I   +      G +    L    +    +  + ++     +L+
Sbjct: 124 MCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVKKENPYDFVLW 183

Query: 312 RSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVK 365
           +++  G+   + P     G   +        +      FD  I+  G D     H   + 
Sbjct: 184 KASKPGEPSWESPW--GQGRPGWHIECSVMSEDLLGLPFD--IHGGGKDLVFPHHENEIA 239

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + EA    +  K      +    V + ++    KMSK  G+F T+R V+ E  ++ VR+ 
Sbjct: 240 QSEAACGCMFSKYW----IHNGFVNVNQE----KMSKSLGNFFTIRDVLKEFDAEIVRYF 291

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD---FDLFPR 482
           ++       LDF    + E  K     Y         +  ++  DI  + +        +
Sbjct: 292 LMTTHYRSALDFSQDHLLEAEKSLNRIYTMLDEISRFNAGKKGVDITKEAEKMKETFMDK 351

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ--EPYKLAF 523
                + +F+T E  L    A +  VI         +P K++F
Sbjct: 352 FQTAMDDDFNTPE-ALA---AMF-EVIRETNRLLGSKPNKISF 389


>gi|218889882|ref|YP_002438746.1| valyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|313109253|ref|ZP_07795221.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|218770105|emb|CAW25867.1| valyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|310881723|gb|EFQ40317.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 950

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|160903062|ref|YP_001568643.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189082329|sp|A9BI29|SYI_PETMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160360706|gb|ABX32320.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 919

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 18/176 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    ++ A        +VL    +   +D    KMSK  G+ +  +
Sbjct: 549 LYLEGSDQHRGWFQSSIFLSVAKHGIAPYESVLTHGFI---KDEEGKKMSKSLGNVVNPK 605

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++++ G+D +R  +        +   +  +++Q +          Y + R+  R     
Sbjct: 606 DIINKYGADILRLWVASADYRMDIKISYNILEQQVE---------TYRKLRNTIRFLLGN 656

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
             D D D    + +  E   +  +  L+  L    + +  A    E YK+  YL +
Sbjct: 657 INDFDPD---EDSVAYEEMLEIDQWALMK-LHNLIKNVTKAYDNYEFYKV-HYLIN 707


>gi|15599029|ref|NP_252523.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|81540188|sp|Q9HXH0|SYV_PSEAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|9950009|gb|AAG07221.1|AE004800_10 valyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 950

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|254242525|ref|ZP_04935847.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|126195903|gb|EAZ59966.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 950

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|116051862|ref|YP_789295.1| valyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587083|gb|ABJ13098.1| valyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 950

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|326793616|ref|YP_004311436.1| isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326544380|gb|ADZ89600.1| Isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 940

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 102/301 (33%), Gaps = 39/301 (12%)

Query: 228 KWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           KW+P      ++ M+       + R     + I   I     + H   P  I D+   + 
Sbjct: 445 KWVPTWGQNRMEGMLNNSPDWCVSRQRTWGVPIALFIHKETQELHPDTPRLIEDVAKRIE 504

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           + G      +      T ++   D      + T   D     +    G   Y   D    
Sbjct: 505 KVG------MDAWFDLTPEELLGDEADSYSKVTDTLD-----VWFDSGVTHYSVVD---- 549

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             + E  F   +Y+ GSD   G+ +     + A+  +     VL         DG   KM
Sbjct: 550 -QREELSFPADLYLEGSDQHRGWFQSSLKTSIAIRGEAPYKQVLTHGF---TVDGDGRKM 605

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ ++ + V+  +G+D +R  +     +  +     ++ ++  +        +Y R
Sbjct: 606 SKSLGNVVSPQKVMSTLGADIIRLWVAATDYTGEMTVS-DEILKRVAD--------SYRR 656

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R         D    P   + +  +    +  ++   A+  + IE A    + + 
Sbjct: 657 IRNTARFMLANLNGFD----PAKDMVESDQMIALDRWIVDRAAQLQKEIEEAYNEYQFHT 712

Query: 521 L 521
           +
Sbjct: 713 V 713


>gi|296387649|ref|ZP_06877124.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 950

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +  +  G+G    I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYETWESNDYFAPS--GEGQPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                           +  L+   +D        V  + +G +  
Sbjct: 65  RMQG---------------------------RNTLWQPGTDHAGIATQMVVERQLGAQGV 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            ++     +   EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 98  SRH-----DLGREKFLEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|296157165|ref|ZP_06840001.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295892501|gb|EFG72283.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 945

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 86/253 (33%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   +  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAQRVEKAGIEAWQSLDPRELLGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D DF    R V     E D   + L  +L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHARPV-EDWLEIDRYAVALSANLQ--NDIL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 SH-YEKYEFHPVV 732


>gi|225175106|ref|ZP_03729102.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169282|gb|EEG78080.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 822

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +     +       Y  +  GK     +E     P+G +H+GH R   +GD LA  
Sbjct: 5   NPSVIEPKWQNFWEKEDFYKTDEEGKKKYYVLEMF-PYPSGRLHMGHMRVYSIGDVLARF 63

Query: 154 MAFSGYEV 161
           +   GY V
Sbjct: 64  LNMRGYSV 71


>gi|254491654|ref|ZP_05104833.1| valyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463132|gb|EEF79402.1| valyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 940

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 60/216 (27%), Gaps = 35/216 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + +          E+     G+GT  +I     N TG +H+GH     + DTL 
Sbjct: 4   TYSPDAIEQRWYQKWEQDGEF--QPSGEGTPYSIMLPPPNVTGSLHMGHGFNNTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                              L+   +D        V  + V  
Sbjct: 62  RYHRMKGDNT---------------------------LWQPGTDHAGIATQMVVERQVNA 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   ++     +F +  W    K+ S       I   L+ L    D   +          
Sbjct: 95  EGKTRHEVGREDFTKRIW--KWKEESG----GNITRQLRRLGSSLDWSRNRFTMDDDLSE 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++ +   L ++G +Y G               D +
Sbjct: 149 AVKHVFVKLHKEGLIYRGKRLVNWDPKLHTAISDLE 184


>gi|217965676|ref|YP_002351354.1| glutamyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290892622|ref|ZP_06555615.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|217334946|gb|ACK40740.1| glutamyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290557931|gb|EFD91452.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307569776|emb|CAR82955.1| glutamyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 491

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 45/309 (14%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     +   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQQLLDEGL-AYKCY 111

Query: 233 VKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  + A  +  +   ++   + +      E                    QG+     
Sbjct: 112 CTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     
Sbjct: 159 FKVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A   +      +      L  +    K+SKR G  I  
Sbjct: 213 HVLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQF 265

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 266 IEQYRDLGY 274


>gi|170755423|ref|YP_001782798.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120635|gb|ACA44471.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 881

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|149568406|ref|XP_001507950.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 161

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 443 KEQSKEN-PVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
              SK N    +V Y  AR  ++F   K  +   L   L   + I      +  E  L+ 
Sbjct: 9   SASSKGNRSGTFVMYNCARLATLFENYKRAVERGLYPALPSTSEIDFSLLHEEGEWLLLF 68

Query: 501 H-LAEYPRVIENATIA--QEPYK--------LAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           + +  +  V+          P          +  +L  L+  F  +++      R+  ++
Sbjct: 69  NDIIPFSEVLSQLAKLPVSSPGIRIPISTEAICKFLVQLSMDFSSYYN------RIHILR 122

Query: 550 ANNRKL---TMMRLQLVHAVASIINSGLNII 577
                L      RLQL+ AV  + +  L+ +
Sbjct: 123 EPQPHLFGQMFARLQLMQAVRDVFHRALSAL 153


>gi|168183482|ref|ZP_02618146.1| valine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796619|ref|YP_002864171.1| valyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673388|gb|EDT85349.1| valine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262502|gb|ACQ53535.1| valine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 881

 Score = 45.7 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWKEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174



 Score = 38.0 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 13/100 (13%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+         V R+        +      VL+  +V   
Sbjct: 472 TPDLKYFYPNNTLVTGYD-IIFFW-------VARMVFAGLYCMDDIPFDTVLIHGIV--- 520

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           RD    KMSK  G+ +    V+DE G+D++RF ++     
Sbjct: 521 RDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAP 560


>gi|326569896|gb|EGE19946.1| valyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 975

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVWLYDEGLIYRG 177


>gi|306834438|ref|ZP_07467552.1| glutamate--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423424|gb|EFM26576.1| glutamate--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 494

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 104/308 (33%), Gaps = 44/308 (14%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTRE 164
           +       K+ + + + +PTG +H+G+ R A+          GD +  +      +  R+
Sbjct: 5   QQETKMPKKIRVRY-APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRK 58

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
            ++ D                 + L  +  + P+ +    Y +    ++  KY  +LL  
Sbjct: 59  RHVED--------GERSQLENLKWLGMDWDESPQTH--EKYRQSERLDIYQKYIDQLLAE 108

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
                    K Y  +  +   R+  +A   +   +I+E  F           I     +G
Sbjct: 109 G-----KAYKSYVTEEELAAERERQEAAG-ETPRYINE--FLGMSEDEKAAYIAEREAKG 160

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
            V    L   +S   +  D+ +  + F    +G   D  + K DG  TY   + A     
Sbjct: 161 IVPTVRLAVNESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDD 215

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +     ++I   G DH     +   V  A+  +  +       +  +       K+SKR 
Sbjct: 216 HLMEISHVIR--GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRD 269

Query: 405 GDFITLRH 412
            + +    
Sbjct: 270 TNTLQFIE 277


>gi|197251578|ref|YP_002149395.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197215281|gb|ACH52678.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|325293103|ref|YP_004278967.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060956|gb|ADY64647.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 947

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 56/199 (28%), Gaps = 32/199 (16%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +    G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ANAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  V ++  ++   +I + LK L    D          G    + ++   L +Q  +
Sbjct: 111 EAFVDKVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSEAVLEVFVTLYKQNLI 169

Query: 287 YEGILPPPKSKTTQKCDMD 305
           Y+           Q    D
Sbjct: 170 YKDKRLVNWDPKLQTAISD 188



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 10/108 (9%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKEN 449
           L RD    KMSK  G+ I    ++DE G+D++RF + +       +  D  ++       
Sbjct: 583 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRNFG 642

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                     +  +  R A+      D            + +  +EL 
Sbjct: 643 T---------KLWNATRFAEMNGVKRDLHFLAETASLTINRWILTELA 681


>gi|313884735|ref|ZP_07818490.1| glutamate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619996|gb|EFR31430.1| glutamate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 492

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 119/386 (30%), Gaps = 39/386 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G +        D    I     S     +  
Sbjct: 10  APSPTGELHIGNARTALFNYLYAR---HYGGDFVIRIEDTDLKRNIAHGEESQLRNLKWL 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRD 247
             + D    E    G Y +     +      +L+   +        ++   +   +  R 
Sbjct: 67  GMDWDESPAEPGEYGPYRQSERAHIYQLLIDQLIAEDKAYRCYMTEEELEAEREEQKARG 126

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++     QH     E +                  QG V       P   T +  DM + 
Sbjct: 127 EMPHYGGQHAHLTPEQE-------------AEFQAQGRVPVIRFRVPHGVTYEWNDMVKG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F S  +    D  + K DG  TY   + A     +     +++   G DH     + 
Sbjct: 174 KVHFESQNIS--GDWVIQKRDGMPTY---NFAVVVDDHLMEISHVLR--GDDHIANTPKQ 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---SDSVRF 424
             +  A   K  +       +  +       K+SKR G  +        +G        F
Sbjct: 227 MMIYDAFGWKIPEFGH----MTLIINAETNKKLSKRDGSILQFIEQYRNLGYLPEAMFNF 282

Query: 425 MMLWRKNSELLDFDFCK-------VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           + L   + +  D  F +         E+   +P  + Q       + + +A D+   +D 
Sbjct: 283 IALLGWSPKGEDEIFSRQEFIDIFDVERLSTSPASFDQKKLEWINNTYMKAADLDTVVDL 342

Query: 478 DLFPRNVIPQESEF-DTSELQLIVHL 502
            L     + + SE     E+  +  L
Sbjct: 343 ALPHLQEVGKVSENPSEEEMAWVKKL 368


>gi|295132056|ref|YP_003582732.1| isoleucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980071|gb|ADF50536.1| isoleucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 1141

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 29/171 (16%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A    +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 649 GVDQTRGWFYTLHAIATMTFDDVAYKNVVSNGLV---LDKNGQKMSKRLGNAVDPFETLS 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
             G D+ R+ M+   N  + L FD   + E S++          F+  YA          
Sbjct: 706 VYGPDATRWYMISNANPWDNLKFDIEGIGEISRKFFGTLYNTYSFFTLYANIDNF----- 760

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
               + + D  L  R  I +    +     LI  + ++           EP
Sbjct: 761 ---TYAEADVKLEERPEIDRWILSELH--TLIEKVDKF-------YADYEP 799


>gi|295401941|ref|ZP_06811904.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109240|ref|YP_003987556.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294976071|gb|EFG51686.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214341|gb|ADP72945.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 466

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 114/352 (32%), Gaps = 46/352 (13%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L + +    E    L     K+ +          +H+G+ R A+V DT+   + F GYEV
Sbjct: 6   LYNTLTRKKEPFEPLEPNKVKMYV--CGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYEV 63

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELADKYSS 219
               Y+++     + L      +  + L  +   + E +       +  +G + AD +  
Sbjct: 64  K---YVSNFTDVDDKLI-----KAARELGEDVPTVAERFIQAYFEDITALGCKKADVHPR 115

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              N           D  ++ +  ++     A  +  D++     F           ID 
Sbjct: 116 VTENM----------DTIIEFIQALVEKGY-AYEVDGDVYYRTRKFAEYG-KLSHQSIDE 163

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L        G       K     D     L   +       D P  K    +    + +A
Sbjct: 164 LKA------GARIEIGEKKEDPLDF---ALWKAAKEGEICWDSPWGKGRPGWHIECSAMA 214

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGM 396
               KY     + I +            E   A + A++ K      L    + +  +  
Sbjct: 215 ---RKY---LGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNE-- 266

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             KMSK  G+F+ +  ++ ++    +RF ML       +++    ++   K 
Sbjct: 267 --KMSKSLGNFVLVHDIIRQIDPQVLRFFMLSVHYRHPINYSEELLENAKKG 316


>gi|225857643|ref|YP_002739154.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225726092|gb|ACO21944.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVAIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  ++  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYESLGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|326564362|gb|EGE14590.1| valyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 975

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVWLYDEGLIYRG 177


>gi|322377993|ref|ZP_08052480.1| glutamate--tRNA ligase [Streptococcus sp. M334]
 gi|321280975|gb|EFX57988.1| glutamate--tRNA ligase [Streptococcus sp. M334]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    EL  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPETHKN--YRQSERLELYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++        +   +  I +     G +    L   +S   
Sbjct: 113 AAERERQEAAGETPRYINEYLGMS-----EEEKVAYIAER-EAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|255654138|ref|ZP_05399547.1| glutamyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449823|ref|ZP_06891590.1| glutamate--tRNA ligase [Clostridium difficile NAP08]
 gi|296877887|ref|ZP_06901907.1| glutamate--tRNA ligase [Clostridium difficile NAP07]
 gi|296261310|gb|EFH08138.1| glutamate--tRNA ligase [Clostridium difficile NAP08]
 gi|296431084|gb|EFH16911.1| glutamate--tRNA ligase [Clostridium difficile NAP07]
          Length = 493

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 40/293 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R       GA  N L    +
Sbjct: 8   APSPTGFVHIGSLRTALYNYLFAKKMGGEYILRVEDTDQSRLV----EGAIENMLNAMKW 63

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  + ++   + +    G Y++    ++  +Y  +LL+  +  +        + 
Sbjct: 64  AGVNHDEGVVLDDSGKVVQKGEYGPYIQSQRLDIYQEYIKQLLDSGK-AYYCFCTKERLD 122

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +    R               E   + G   +  ++ ++   + G  Y   L  P++ T
Sbjct: 123 EVRDAQRA------------AGETAKYDGHCKNLSKEEVEANIKAGIPYVIRLRLPENHT 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ R  + F +  +    D+ L+K+DG  TY     A     Y     ++I   G 
Sbjct: 171 IKFTDLVRGDMEFNTNDLD---DQVLMKTDGFPTYHF---AVVVDDYLMKITHVIR--GE 222

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +      +   +  A   +      L   L     +    K+SKR GD     
Sbjct: 223 EWVSSTPKHVYLYEAFGWEAPVFVHLPNIL-----NKEKKKLSKRQGDVAVED 270


>gi|149194837|ref|ZP_01871931.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134996|gb|EDM23478.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 819

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K    I      +         K  I  +   P+G +H+GH R   +GD +A  
Sbjct: 5   KPDVIEKKWQEIWDKEEAFEPKEDYTLPKKYILSMFPYPSGRIHMGHVRNYSIGDAIARY 64

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 65  YRKKGFNV 72


>gi|326563766|gb|EGE14017.1| valyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 975

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 36/194 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +K        G    +       K N   I     N TG +H+GH     + DTL     
Sbjct: 17  QKWYKIWEQQGYFKPQPNPAMSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHR 76

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G+    +   + AG     +                         G+    +G+E   
Sbjct: 77  MMGHNTLWQPGTDHAGIATQMVVERQL-----------------GLQGISRHDLGRE--- 116

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                   F ++ W    K+ S   + + IR     L    D          G    +++
Sbjct: 117 -------KFIDKIW--AWKEQSGNTITRQIR----RLGSSVDWSRERFTMDDGLSQAVKE 163

Query: 276 IIDNLARQGYVYEG 289
           +   L  +G +Y G
Sbjct: 164 VFVWLYDEGLIYRG 177


>gi|261839881|gb|ACX99646.1| valyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 872

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 58/315 (18%), Positives = 99/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIH---RTIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMKFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFESLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|200388131|ref|ZP_03214743.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199605229|gb|EDZ03774.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|168232814|ref|ZP_02657872.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194472691|ref|ZP_03078675.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194459055|gb|EDX47894.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205333005|gb|EDZ19769.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|161617770|ref|YP_001591735.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|161367134|gb|ABX70902.1| hypothetical protein SPAB_05633 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|90580543|ref|ZP_01236348.1| isoleucyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438201|gb|EAS63387.1| isoleucyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 946

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+ +K     VL    V    DG   KMSK  G+ +  +
Sbjct: 567 LYLEGSDQHRGWFQSSLISSVAMKDKAPYKQVLTHGFVV---DGQGRKMSKSIGNVVAPK 623

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 624 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTARFFLAN 674

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               + +    + +P E         +   +     +I++       + +  
Sbjct: 675 LSGFNPE---TDCVPAEEMVALDRWAVGRAMTAQEEIIKD-YEDYNLHSVTQ 722


>gi|56807711|ref|ZP_00365584.1| COG0143: Methionyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 666

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGISPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERSDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|307710935|ref|ZP_07647360.1| glutamyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617236|gb|EFN96411.1| glutamyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 102/295 (34%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     +L  KY  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----DLYQKYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
           +  +   R+  +A   +   +I+E   + G     +   I      G +    L   +S 
Sbjct: 109 EEELAAERERQEAAG-EPPRYINE---YLGMSEEEKAAYIAEREATGIIPTVRLAVNESG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G
Sbjct: 165 IYKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 481

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 130/417 (31%), Gaps = 88/417 (21%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI---------------NTLALS 180
            H+G+ R  ++ D L   + + GY V       D   ++               +    +
Sbjct: 37  FHIGNARAFILPDILKRYLEYKGYNVLHVTNFTDVDDKMIKRANEEEIEIEELADRFITA 96

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
            F   ++         P+       +  + K+L DK  +  ++      +    DY    
Sbjct: 97  YFEDTERLNIKQADVYPKATEHISDIIELVKKLEDKGYAYEVDGDVFFAVRKFADYG--- 153

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             K+   +L+ L        S  + +     P+  ++   +++G   E     P      
Sbjct: 154 --KLSNQELEEL-----TSGSRVEVNDKKEDPLDFVLWKKSKEG---EPSWESPWGTGRP 203

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
              ++   +                    S  Y   +  +     +  F +        H
Sbjct: 204 GWHIECSAM--------------------SMCYLGEEFDFHTGGVDLVFPH--------H 235

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
              + + EA   +         V+   L   Y +    KMSK  G+F T R ++ +  ++
Sbjct: 236 ENEIAQNEAGVGS--------QVVNYWLHNGYINVDGEKMSKSLGNFFTTRDILQDYSAE 287

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480
            +RF ++ +     ++F      +   +N    +Q    R ++   + KD+      DL 
Sbjct: 288 VLRFFLISKHYRSPINFS-----DAELDNAAKSLQ----RLQNTVNKLKDLLDRDRADLK 338

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRV----IENATIAQEPYKLAFYLYDLASVFH 533
           P N    + E    E ++     ++       +  A      +       +LA   +
Sbjct: 339 PGN----KEELQELEKKIKAKREKFEEAMDDDLNTALAIGALH-------ELAKELN 384


>gi|261403349|ref|YP_003247573.1| lysyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370342|gb|ACX73091.1| lysyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 529

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 116/353 (32%), Gaps = 35/353 (9%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
           +  S I   + +  +  K  I      P+G +HVG+ R  +  D +   +   G E    
Sbjct: 1   MHWSDIIAEKLINERKEKKYIVASGITPSGHIHVGNARETLTADAIYKGLIHKGVEAELI 60

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           + I D    +  L   +   +++ +    S++P    P    K       + Y   L + 
Sbjct: 61  F-IADTYDPLRKLYPFLPEEFKEYIGMPISEIPC---PEGCCKSYADHFLNPYLESLNDL 116

Query: 225 PEEKWLPIVKD-YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             E       + Y      + I+  L+      DI                 ++++    
Sbjct: 117 GIELTTYKADENYKKGLYDEKIKIALENKEKIRDILNKFRS---------NPLLEDWFPI 167

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
             V E              D +++++++R    G + +    K            A    
Sbjct: 168 NVVCENCGKLKT--KVLNYDKEKEKVIYRCEFCGHEGEVKPYKGR----------AKLPW 215

Query: 344 KYERGFDNMI-YV----MGSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           + +      I  V    MG DH+   G       +A  V         ++ E ++L    
Sbjct: 216 RVDWPARWSIFNVSIEPMGKDHAAAGGSYDTGVLIAREV-YNYTPPKKVVYEWIQLKVGD 274

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             + MS   G    ++        + +RF++L  K ++ +DFD  K+ +   E
Sbjct: 275 KAVPMSSSKGVVFAVKDWTHIAHPEILRFLLLRSKPTKHIDFDLKKIPDLVDE 327


>gi|168821100|ref|ZP_02833100.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205342359|gb|EDZ29123.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320088907|emb|CBY98665.1| Valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|168262482|ref|ZP_02684455.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205348762|gb|EDZ35393.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|187734802|ref|YP_001876914.1| valyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424854|gb|ACD04133.1| valyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 890

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 56/196 (28%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + +   S  +    +  +   +    ++     N TG +H+GH     + D L   
Sbjct: 9   DPSLVEEKWQSRWIEEGCFKADPASEKPAYSVVIPPPNVTGVLHLGHVLNNTIQDILVRR 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE              +   ++   R ++                        +L
Sbjct: 69  ARQKGYEAL-------WLPGTDHAGIATQVRVEK------------------------DL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E +L  V ++  +    II + L  L    D               +
Sbjct: 98  KQTTGRSRHDLGREAFLEKVWEWKEKHG-GIIINQLHKLGCSCDWDRERFTMDEEYTKAV 156

Query: 274 RDIIDNLARQGYVYEG 289
             +   L ++G +Y G
Sbjct: 157 GQVFIELFKEGLIYRG 172



 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 88/289 (30%), Gaps = 50/289 (17%)

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           WL  ++D+ +   +            +  ++  +D       +P  D       QG++Y 
Sbjct: 395 WLENIQDWCISRQLWW--------GHRIPVWYRKDKAEELRNAPALDASA--LEQGFLYV 444

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
           G   PP+       D D     F S        D+  R          Y   DL      
Sbjct: 445 GT-EPPQDPDNWIQDNDVMDTWFSSWLWPFSTMDEETRAKF-------YPTTDLVT---- 492

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              G D +I+         V R+          K   NV    ++   RD +  KMSK  
Sbjct: 493 ---GPD-IIFFW-------VARMIMAGYRFQHDKPFSNVFFTSII---RDKIGRKMSKSL 538

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+      ++   G+D +RF  L R      D  F + +     N    + Y   R R +
Sbjct: 539 GNSPDPLDLIANYGADGLRFG-LMRIAPTGTDVRFDENQISEGRNFANKL-YNATRFRLM 596

Query: 465 FRQA-KDIFPDLD------FDLFPRNVIPQESEFDTSEL-QLIVHLAEY 505
              A  +  P              +     E      E   LI  L ++
Sbjct: 597 QGDARGETAPHYSSVHISIISKLKQLHADVEKALADYEFNALIQTLYQF 645


>gi|146296824|ref|YP_001180595.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166230621|sp|A4XKG9|SYL_CALS8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145410400|gb|ABP67404.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 817

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y         K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFREIEKKWQQKWFSQN-----KYKVTEDSPKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|42519974|ref|NP_965889.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|60390721|sp|Q73IT7|SYL_WOLPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|42409711|gb|AAS13823.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 838

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 35/217 (16%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K +        ++  +  GK  K  +  +   P+G +H+GH R   +GD +A     +G+
Sbjct: 6   KSVEKFYQDKWDFSVSKSGKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGF 65

Query: 160 EV---------------------------TREYYINDAGAQINTLALSVFWR------YQ 186
           EV                           T+E  I++   Q+ ++ LS  W         
Sbjct: 66  EVLHPIGWDAFGLPAENAARDNNISPETWTKEN-IDNMRTQLKSIGLSYNWERELSTCEP 124

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
               +      +    G+  +       D     +L   +       +  +V    K+ +
Sbjct: 125 DYYKHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLSQ 184

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             LK  +   D+        +  P  ++ + +    +
Sbjct: 185 WFLKITDFAEDLLKCLQSL-KNWPEKVKTMQERWIGK 220


>gi|16763276|ref|NP_458893.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29144755|ref|NP_808097.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213427638|ref|ZP_03360388.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213650371|ref|ZP_03380424.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|81512137|sp|Q8Z118|SYV_SALTI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|25293115|pir||AC1061 valine-tRNA ligase (EC 6.1.1.9) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505584|emb|CAD06936.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29140394|gb|AAO71957.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|316970809|gb|EFV54681.1| putative valine--tRNA ligase [Trichinella spiralis]
          Length = 1524

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 21/65 (32%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
              ++        ++   + ++   +           N TG +H+GH     + D +A  
Sbjct: 31  DAKFVESCWYDFWLANDFFNKSPTSRRRPYIFCLPPPNITGDLHLGHALTVAIEDAIARK 90

Query: 154 MAFSG 158
               G
Sbjct: 91  HRMCG 95


>gi|238910631|ref|ZP_04654468.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|227431198|ref|ZP_03913252.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352960|gb|EEJ43132.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 894

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 67/243 (27%), Gaps = 40/243 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  K L +   +    G     +    +I     N TG +H+GH     + D +    
Sbjct: 21  DNWQSKKLFAPESNKEIQG----NEPEPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 76

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + +Q L                         
Sbjct: 77  RMQGFDTL-------WLPGMDHAGIATQAKVEQRLRGE---------------------- 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   EK++  V D+        I+     + +  D          G    + 
Sbjct: 108 ---GVSRYDLGREKFVEQVWDWK-NEYATTIKQQWGKMGLSLDFDRERFTLDEGLNKAVN 163

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +  +L  +G +Y G          +    D +  +      G         +DG+ T+ 
Sbjct: 164 KVFIDLYNKGLIYRGEYIINWDPQARTALSDIE--VIYQDDAGAFYHVKYPFTDGT-TFD 220

Query: 335 AAD 337
             D
Sbjct: 221 GKD 223



 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 97/286 (33%), Gaps = 41/286 (14%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            D  V+ +     D           ++       G   P     +    Q  +Y G   P
Sbjct: 390 DDEKVEFVPARFEDTFSRWMENIRDWVISRQLWWGHQIP-AWYKNKGTDQEKLYVGTEAP 448

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                 +  D+      F S +          K DG +  +     Y       G+D +I
Sbjct: 449 AGDGWERDPDVLD--TWFSSALWPFSTMGWPEKLDGDFARY-----YPTNTLVTGYD-II 500

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +         V R+       + ++   NVL+  L+   RDG   KMSK  G+ +    V
Sbjct: 501 FFW-------VARMMFQGKEFTGQRPFKNVLIHGLI---RDGEGRKMSKSLGNGVDPMDV 550

Query: 414 VDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++ G+D++R+ ++      + L F + K+              A+     I+  ++ + 
Sbjct: 551 IEKYGADALRWFLVTGSTPGQDLRFTYEKMDS------------AWNFINKIWNASRYVI 598

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQ 516
            +LD D          +  D S+L L     L+    V+ N T   
Sbjct: 599 MNLDED-------TPSTLPDMSQLTLADQWILSRLNTVVTNVTRNF 637


>gi|242817569|ref|XP_002486982.1| glutamyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218713447|gb|EED12871.1| glutamyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 570

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 76/409 (18%), Positives = 142/409 (34%), Gaps = 69/409 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R       GA+   L   + 
Sbjct: 62  APSPTGYLHLGSLRTALFNYLLAKRTGGQFLLRLEDTDQKRTIP----GAE-ERLYSDLQ 116

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKD 235
           W     L  ++  +  G Y G Y +     L +K++++L++       F   + L  +  
Sbjct: 117 WA---GLQWDEGPIVSGPY-GPYRQSERTALYNKHANDLVHSGHAYRCFCSAERLDTLAR 172

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              QA + +  D       +H + IS ++      +    ++   A +   ++  +    
Sbjct: 173 QRNQAGLPLGYD-------RHCVDISTEEAEERAANGEAHVVRLKADEYPKFKDFVFGTT 225

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +          Q  +  TM     D  LLKSDG+ TY    LA     +     ++I  
Sbjct: 226 GQN------QDGQKKYLKTMNRVYDDPILLKSDGNPTYH---LANVVDDHHMKITHVIR- 275

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF-ITLRHVV 414
            G++         A+  A + K  Q        V L  D    K+SKR  +  I+     
Sbjct: 276 -GTEWLASTPMHVALYNAFNWKPPQFGH-----VPLLVDQNGQKLSKRNSNIDISFYRDS 329

Query: 415 DEVGSDSVRFMML--WRKNSELLDFDFCKV-----KEQSKENPV------FYVQYAYARC 461
             + S  + +  L  W  N +   F    +      + +K N +      +++Q A+ + 
Sbjct: 330 GILPSTLLNYAALLGWSHNQKSEVFSLRDMEEIFTLKITKGNTIVSPEKMWFLQKAHTKR 389

Query: 462 RSIFRQAKDIFPDLD----FDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
             +     +    +D          N+    S  DT     +  L  Y 
Sbjct: 390 C-VADNGPEFQKLVDDVTKAAKERGNITDNLSVNDT-----VKSLLRYD 432


>gi|194444143|ref|YP_002043715.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194402806|gb|ACF63028.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|168234605|ref|ZP_02659663.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735911|ref|YP_002117396.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194711413|gb|ACF90634.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197291693|gb|EDY31043.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|110680399|ref|YP_683406.1| glutamyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123065394|sp|Q163X3|SYE2_ROSDO RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|109456515|gb|ABG32720.1| glutamyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 466

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 89/289 (30%), Gaps = 41/289 (14%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G +        D          ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRARSTPEATQAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                   ++D D+   +        V  EL          F  ++ +   ++ +     
Sbjct: 61  DGMAWLGLDHDGDIVSQFDNAARHAAVAMELLA-AGKAYKCFATQEEISAFREAA----- 114

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R D                 +R   SP RD              I  P + +T  + 
Sbjct: 115 ---RAD------------GRSTLYR---SPWRDAAQEAHPDAPFVIRIKAPQEGETIIR- 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH  
Sbjct: 156 DQVQGDVTIRNDQLD---DMVLLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHLN 207

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+        V +   + L       K+SKR G      
Sbjct: 208 NAARQMMIYNALGWD-----VPVWAHIPLIHGPDGKKLSKRHGALGAQE 251


>gi|62182901|ref|YP_219318.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224586299|ref|YP_002640098.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|81309503|sp|Q57GC5|SYV_SALCH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|62130534|gb|AAX68237.1| valine tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224470827|gb|ACN48657.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322717404|gb|EFZ08975.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|262037765|ref|ZP_06011207.1| glutamate--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748237|gb|EEY35634.1| glutamate--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 504

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 134/391 (34%), Gaps = 46/391 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG  HVG    A +G         +G +        D      T    +F   + 
Sbjct: 14  IAPSPTGDPHVG---TAYIGLFNYVFAKHNGGDFLLRIEDTDRTRFSETSEQQIFNMMKW 70

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              N D     G   G Y +     +  +Y+ +L+   E  +        +Q + +    
Sbjct: 71  LGLNYDEGPDIGGNSGPYRQSERFSIYKEYAEKLVEKGE-AYYCFCTPERLQKLRERQIA 129

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +A                   +  ++ ++     G  Y   L  P    T   D  R 
Sbjct: 130 MKQAPGYDGHC-----------RNLSKEEVEAKLAAGEPYVIRLKMPYEGETIVRDGLRG 178

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            ++F ++ +    D+ LLKSDG  TY    LA     +  G  ++I     +      + 
Sbjct: 179 DIVFENSKID---DQVLLKSDGFPTYH---LANIVDDHLMGITHVIR--AEEWIASTPKH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVRFM 425
             +  A    + +        + L R+    K+SKR  + +++ + ++E  +    + F+
Sbjct: 231 IQLYKAFGWDEPK-----WYHMPLLRNADKTKISKRK-NPVSMNYYMEEGYLKEGLLNFL 284

Query: 426 MLWRKN----------SELL-DFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFP 473
            L   +           E++ +F F K+   S   PVF  V+  +   + +  +  D   
Sbjct: 285 ALMGWSFGGDKEIFTIDEMIENFSFDKI---SLGGPVFDLVKLGWVNNQHMRLKDLDELT 341

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
            L    F +    ++ +    E   +  + E
Sbjct: 342 KLAIPYFVKAGYYKDEDLSEEEYGKLRRIVE 372


>gi|289578081|ref|YP_003476708.1| glutamyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527794|gb|ADD02146.1| glutamyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 483

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 113/367 (30%), Gaps = 52/367 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +      ++D   Q               
Sbjct: 9   APSPTGSLHIGGARTALFNWLFAR---HYGGKFILR--VDDTDLQ--RSTKESMKGILDG 61

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  EG            +  D+Y        +E        +  +  ++ +R  
Sbjct: 62  LKWLGIDWDEGPI-------YQSQRLDEYRKFANKLLDEGKAYYC--FCTKEELEEMRRR 112

Query: 249 LKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +               + G   +  R+ I+   ++G      L  P    T   D+ R 
Sbjct: 113 AENEGRPF--------MYTGKCRNLTREQIEEYLKKGKRPVIRLKVPSEGKTIVHDIIRG 164

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F ++ + D +   ++KSD   TY   + A     Y+ G  ++I     +H     + 
Sbjct: 165 DVEFDNSTIDDFI---IMKSDNMPTY---NFATVVDDYQMGITHVIR--AEEHLSNTPKQ 216

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVRFMM 426
             +  ++  +  Q        V +       K+SKR G   +        +    V ++ 
Sbjct: 217 ILIYESLGLETPQFAH-----VSMVLAPDRSKLSKRHGATSVQEFEEQGYLPEAIVNYIT 271

Query: 427 LWRKNSELLD--FDFCK-----VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           L     +  +  FD  K       E+  +NP  Y                    + D D 
Sbjct: 272 LLGWMPKDGEEIFDVSKSIKEFTLERVSKNPAVYDVQKLTWIN------GHYIRNYDLDK 325

Query: 480 FPRNVIP 486
               VIP
Sbjct: 326 LTEAVIP 332


>gi|71893760|ref|YP_279206.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71851887|gb|AAZ44495.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 513

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 144/440 (32%), Gaps = 55/440 (12%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-AGAQINTLALSVFWRYQQALYN 191
           +G +H+GH    V+   + +    SG+E  R +  +D  G +I+ LA       Q+ +  
Sbjct: 15  SGRLHIGHLYTTVLAWVIRNFKKMSGFEA-RLFTGSDEHGQKISQLAAKANLEPQEFVDK 73

Query: 192 NDSDLP----EGYYPGVYLK---------HVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           N  +      +      Y +          + K     Y    +   E + L  + D   
Sbjct: 74  NVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEYQGLYSISDEEF 133

Query: 239 QAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPP 294
            +  + +  +      ++      ISE  +        + + D L     ++++  +   
Sbjct: 134 LSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENPKFIFDSKIANE 193

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDR--------PLLKSDGSYTYFAADLAYFKCKYE 346
             +   +  ++   +  ++   G  +D+          L +  SY     D    +   +
Sbjct: 194 LRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVFKDQIDLENPKK 253

Query: 347 RGF----DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             F      +I V+G +    + R   +   +  K     +    L   +      KMSK
Sbjct: 254 SNFWTDSAQIIQVVGKE----IARFHCIYWPIFLKSLNFPLPSIILTHGWLITPEGKMSK 309

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ I    ++ +   + ++F  + + N++  D  F +   ++  N  F   +     R
Sbjct: 310 SKGNVINPLDLLKKFDPEIIKFYFVSQINTKN-DSVFDENLLENFYNSFFVNTFGNLISR 368

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR-----VIENATIAQE 517
           +I      I    D  L         ++    E  L+  L E+        IE A     
Sbjct: 369 TI----ALIVKKFDQPLLFEIADLDWTDISFYEKILL-SLDEFCDNFDQLEIEKAFKT-- 421

Query: 518 PYKLAFYLYDLASVFHGHWS 537
                  + +L    +G + 
Sbjct: 422 -------VIELTKNLNGFFD 434


>gi|327314663|ref|YP_004330100.1| isoleucine--tRNA ligase [Prevotella denticola F0289]
 gi|326944400|gb|AEA20285.1| isoleucine--tRNA ligase [Prevotella denticola F0289]
          Length = 1221

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 69/306 (22%), Positives = 110/306 (35%), Gaps = 53/306 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +++   E     V   +   E A        N  +
Sbjct: 576 LNDW-----NLSRSRFWGTPLPIWRDENR-GEKCIGSVEELYNEIEKAVAAGVMDRNPLK 629

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDN----L 280
           E    +V D+S +      R DL    +   + ++E+    HR +   I    D+     
Sbjct: 630 EAGF-VVGDFSQE---NYDRIDLHRPYVDEIVLVNEEGRPMHR-EADLIDVWFDSGSMPY 684

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+  Y +EG +     K T K + + ++ L  ST  G  V      +D            
Sbjct: 685 AQLHYPFEGEINAEGLKATGKTEAEYRRELVHSTYEGTAVPPAFFPAD------------ 732

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                       I   G D   G+   L A+A  V +  A  NV+   LV    D    K
Sbjct: 733 -----------FINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLV---LDAKGNK 777

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPV 451
           MSK  G+      ++ + G+D VRF M+      + L FD   V E  ++          
Sbjct: 778 MSKHVGNVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDECRRKFFGTLYNTYS 837

Query: 452 FYVQYA 457
           F+  YA
Sbjct: 838 FFALYA 843


>gi|317014539|gb|ADU81975.1| valyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 872

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 101/319 (31%), Gaps = 38/319 (11%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG     + 
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQNVV 97

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                   +    N     E      ++K V  E  +K    +L   +   +      + 
Sbjct: 98  --------EKQLLNQGIKKEDLGREEFIKKV-WEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKC----- 343
               K        R + LF  + +     D+  R L+            +          
Sbjct: 209 LENQKDYLVVATTRPETLFGDSAIMVNPNDERYRHLVGQQVILPLINRTIPIIADAHVEM 268

Query: 344 -------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                  K   G D   Y +G  H     ++        ++K  +N    E   L R   
Sbjct: 269 EFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGEFENLERLEA 321

Query: 397 PIKMSKRAGDFITLRHVVD 415
             K+ +R  ++  L  + +
Sbjct: 322 RDKVVERLKEYALLEKIEE 340


>gi|302872640|ref|YP_003841276.1| glutamyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575499|gb|ADL43290.1| glutamyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 485

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 117/360 (32%), Gaps = 61/360 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R             +  S+ 
Sbjct: 8   APSPTGHLHIGGARTALFNYLFAKRYGGKFILRIEDTDLERSSI-----ESEKVIIESLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     +   P G Y       + K                K++ ++ +       
Sbjct: 63  WLGIEWDEGVEVGGPHGPYRSTERVDIYK----------------KYVDVLFEKGYAYHC 106

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
               ++L+A   Q    +S+    R      +   +      ++G         P+    
Sbjct: 107 YCSEEELEA---QRQQLLSQGQMPRYLGKCRNLTEEQKRRFEQEGRKPTVRFKVPEGVKI 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  + F S  +GD     ++KSDG  TY   + A     +     ++I   G +
Sbjct: 164 IVHDLVRGDVEFMSDDIGDF---VIVKSDGIPTY---NFAVVIDDHLMKISHVIR--GEE 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-DFITLRHVVDEVG 418
           H     R   +  A+     Q        V L       KMSKR G  ++        + 
Sbjct: 216 HLSNTPRQILIYNALDFNLPQFAH-----VSLILGKDRTKMSKRHGSTWVEQYKEQGYLK 270

Query: 419 SDSVRFMMLWR----KNSELLDFDF---CKVKEQSKENPVF-------YVQYAYARCRSI 464
              + F+ L      ++ E+ D D+       ++  +NP         Y+   + + +S+
Sbjct: 271 EGLINFLALLGWSPPEDKEIFDMDYLIKNFSLDRVSKNPAIFDIDKLNYINSQHIKLKSL 330


>gi|288929424|ref|ZP_06423269.1| glutamate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329526|gb|EFC68112.1| glutamate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 505

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 59/294 (20%), Positives = 104/294 (35%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++   + I D  +Q    
Sbjct: 1   MSERKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQQGGDLV--FRIEDTDSQRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   KE+  +Y  +LLN          
Sbjct: 55  GAEEYIIESFRWLGIKFDEGVSF--GGKYGPYRQSERKEIYKQYVDQLLNEG-----KAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +     ++  R +++    Q+D      +  R   +   + +D L   G  Y      
Sbjct: 108 IAFDTPQELETKRAEIENF--QYDAQT--RNGMRNSLTMSAEEVDALIGDGTQYVVRFKV 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     DM R  ++ +S ++    D+ L KS DG  TY    LA     +     ++
Sbjct: 164 MPGEEVHVNDMIRGDVVIKSDILD---DKVLYKSADGLPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A              L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYKAFGWADTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|255520319|ref|ZP_05387556.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 491

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 45/309 (14%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     +   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQQLLDEGL-AYKCY 111

Query: 233 VKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  + A  +  +   ++   + +      E                    QG+     
Sbjct: 112 CTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     
Sbjct: 159 FKVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A   +      +      L  +    K+SKR G  I  
Sbjct: 213 HVLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQF 265

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 266 IEQYRDLGY 274


>gi|188589290|ref|YP_001921703.1| glutamyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689709|sp|B2V5H4|SYE_CLOBA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|188499571|gb|ACD52707.1| glutamyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 485

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 117/291 (40%), Gaps = 35/291 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG MHVG+ R A+    +A     +G  + R   I D   Q   +  A+ + +   
Sbjct: 11  APSPTGYMHVGNLRTALYAYLIAK--HEAGDFILR---IEDT-DQERLVDGAVDIIYNTL 64

Query: 187 QALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +    N  + P+ G   G Y++   K +  +Y+  L+   E  +    KD      + ++
Sbjct: 65  KLTGLNHDEGPDVGGNVGPYVQSERKAIYLEYAKNLVEKGEAYYCFCSKDR-----LDML 119

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++ +AL            + +      ++ I+    +G  Y      P + +T   D+ 
Sbjct: 120 KENAEALKRPF-------KYDKHCLHLTKEEIEANLAKGLPYVIRQNNPTTGSTTFDDVI 172

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             ++   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 173 YGKITVDNSEL---EDMILIKSDGLPTY---NFANVVDDHLMGITHI--VRGNEYLSSSP 224

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A       + V    +++   +    K+SKR GD  +   ++ +
Sbjct: 225 KYNRLYEAFGWDIP-VYVHCPPIMKDTHN----KLSKRNGDA-SFEDLMKK 269


>gi|160903262|ref|YP_001568843.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|187629839|sp|A9BGT9|SYC_PETMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160360906|gb|ABX32520.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 469

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 107/320 (33%), Gaps = 53/320 (16%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  ++ D     + + GY+VT      D   +I            +     +  
Sbjct: 41  LHIGNARPIIIFDAFRRFLEYIGYKVTLVQNFTDIDDKI-----------IEQAKKENLP 89

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             E      Y+    +++    +      P+           V  ++  I++        
Sbjct: 90  FEEVGKR--YIIEYWRDMTALKARAFNFHPKTTN-------YVDEIISYIKE-------- 132

Query: 256 HDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK-----QL 309
               + E  + ++ +   +   ++  +R G +    +   K     +    +K      L
Sbjct: 133 ----LEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGVRVEVSEYKKNPLDFAL 188

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTY----FAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              S       + P  K    +       ++++         G +++I+        + +
Sbjct: 189 WKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGGNDLIF-------PHHE 241

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
              A A A S K      +   ++R+ +D    KMSK  G+   LR ++ +  SD ++  
Sbjct: 242 NERAQAIAKSGKDFAKYWMHNGMIRMAQD----KMSKSLGNVWYLRDLLKKFDSDVLKIF 297

Query: 426 MLWRKNSELLDFDFCKVKEQ 445
           +L +     +D     ++ Q
Sbjct: 298 ILSKHYRIPIDVSEELLRNQ 317


>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785521|ref|YP_091350.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825316|sp|Q65JV7|SYI_BACLD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348023|gb|AAU40657.1| IleS [Bacillus licheniformis ATCC 14580]
 gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 922

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 124/395 (31%), Gaps = 87/395 (22%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D     L    + KW+P   +  +  M++  R D      +A  +   +F +E     
Sbjct: 415 IKDFRDELLEAVKKTKWVPEWGETRLYNMIRD-RGDWCISRQRAWGVPIPVFYAE----N 469

Query: 268 GDPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           G+P    + I+                      + EG   P         + D   + F 
Sbjct: 470 GEPIITDETINHVSELFREHGSNIWFEKEANELLPEGFTHPGSPNGKFTKEQDIMDVWFD 529

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDH-SGYVKRLEA 369
           S               GS        A  + + +  R  D  +Y+ GSD   G+     +
Sbjct: 530 S---------------GSSH-----QAVLEEREDLVRPAD--LYLEGSDQYRGWFNSSIS 567

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            A AV+ K     VL         DG   KMSK  G+ +    ++++ G+D +R  +   
Sbjct: 568 TAVAVTGKAPYKGVLSHGF---ALDGEGRKMSKSLGNVVVPAKIMNQFGADILRLWVASV 624

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                +      +K+ ++          Y + R+ FR       D D     ++ I  E 
Sbjct: 625 DYQADVRVSDAILKQVAE---------VYRKIRNTFRFLHGNIADFD---PAKDAIAVED 672

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-------LYDLASVFHGHWSHGREN 542
             +  +  LI  L      ++ A    +   +  Y         +L       +      
Sbjct: 673 LREVDQYILIK-LNSLIEKVKKAYEEYDFAVI--YHAVHNFCAIEL----SSFYMDF-AK 724

Query: 543 PRLRFVQANNRKLT-------MMRLQLVHAVASII 570
             +    A+++             L LV  +A I+
Sbjct: 725 DVVYIEHADHKDRRSMQTVFYETLLALVKLIAPIL 759


>gi|14325506|dbj|BAB60409.1| tRNA synthetase Cys [Thermoplasma volcanium GSS1]
          Length = 472

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 61/425 (14%), Positives = 136/425 (32%), Gaps = 79/425 (18%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 +VN+           H+GH R  +  D +A  +   GY V     I D   +I 
Sbjct: 33  NEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKLEGYSVFYLQNITDIDDKII 92

Query: 176 TLALSVFWRYQQALYNNDSDLPEG------------YYPGVYLKHVGKELADKYSSELLN 223
             A  +     +      S+  E                 +Y+  +  +++         
Sbjct: 93  NRAKEMGIEPSEVAKIYFSEFQEDMKRLKVDSVNFFARATLYIDEIVSQISRMMEKGYAY 152

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             ++     V+ +  +   ++    L  +   + + ++E+  +  D          L ++
Sbjct: 153 ETDDGVYFEVRKF--KDYGELSNQSLDQIIAGYRVAVNENKRNPEDF--------VLWKK 202

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
               E   P P  +      ++   +    T  GD+ D     SD  + +  A++A  + 
Sbjct: 203 KKAGEPSWPSPWGEGRPGWHIEDTAIT--ETYFGDEYDIHGGGSDLIFPHHEAEIAQMRS 260

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
                      + G     Y+         ++  K                    KMSK 
Sbjct: 261 -----------ISGKR---YLAHYWIHTGMININK-------------------EKMSKS 287

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
             +FIT+R ++ +   + +RF +L       ++F    ++E  K      + Y       
Sbjct: 288 LKNFITIRDILKDYRPEDLRFAILNANYRTQIEFSKELMEESKK-----LIDY----IND 338

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQ-----ESEFDTSELQLIVHLA-------EYPRVIEN 511
            +R+ + +    +F +   +VI +     E++FD   + ++  LA        +  + + 
Sbjct: 339 TYRKLEYVNGSGNFKIDVNSVISEMRSLAENDFDFHSV-IVKLLAITGEINRNFEGINKE 397

Query: 512 ATIAQ 516
                
Sbjct: 398 VAEEL 402


>gi|330873099|gb|EGH07248.1| valyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|291460472|ref|ZP_06599862.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416844|gb|EFE90563.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 673

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 118/375 (31%), Gaps = 75/375 (20%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D +A    F GY+V  +   ++ G +I   A   
Sbjct: 9   TTAIAYASGKP----HIGNTYEIVLADAIARFKRFEGYDVFFQTGTDEHGQKIEQKAREA 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                            G  PG Y+  V  E+  +   +L+N   +K++     Y  + +
Sbjct: 65  -----------------GMEPGQYVDGVVGEI--RAIWDLMNTSYDKFMRTTDPYHEKQV 105

Query: 242 MKIIRDDLKALNIQHDIF-------------------------------ISEDDFHRGDP 270
            K+ R   +  +I   ++                                SE  +     
Sbjct: 106 QKMFRKMYEKGDIYKGVYEGWYCTPCESFWTDSQLVDGKCPDCGRPVERASESSYFFRMS 165

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSK----TTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                ++ ++       + +    +           D+   + +F+  +  D     ++ 
Sbjct: 166 KYADRLMKHIEEHPEFIQPVSRKNEMVNNFLKPGLQDLSVSRTVFKWGIPVDFDPENVIY 225

Query: 327 S--DGSYTYFAADLAYFKC-----KYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVS 375
              D    Y    L Y        ++ R +   ++++G D    H+ Y         ++ 
Sbjct: 226 VWLDALTNYITG-LGYDVDGNSSERFHRYWPADLHLIGKDIIRFHTLY---WPIFLMSLE 281

Query: 376 EKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SE 433
               +       L+    +    +KMSK  G+ I    +V   G D+VRF ++       
Sbjct: 282 LPLPKQVFGHPWLLTAAGKSEEGVKMSKSRGNVIYADELVRLFGVDAVRFFVIHEMPFEN 341

Query: 434 LLDFDFCKVKEQSKE 448
                +  + E+   
Sbjct: 342 DGVISWELMAERYNG 356


>gi|217976728|ref|YP_002360875.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217502104|gb|ACK49513.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 519

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 95/328 (28%), Gaps = 38/328 (11%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G  H+GH    +  D +A      GYE      +++ G ++   A          L
Sbjct: 13  PYANGAPHIGHAYERIATDAIARFKRLDGYETLFVTGMDEHGQKMQQTAAR---ENLSPL 69

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRD 247
              D    + Y  G  L     ++     +      +E W  +    D  +         
Sbjct: 70  QLADRTAAQFYAMGELLNASADDIVRTTEARHHAASQEIWKRMQASGDIYLSKYPGWYSV 129

Query: 248 DLKALNIQHDI-----------------FISEDDFHRGDPSPIRDIIDNLARQGYV---- 286
             +A     ++                 ++ E+ ++    +    ++     +       
Sbjct: 130 RDEAFFDDSELTDGPGGSKLAPTGAPVEWVEEESYYFRLSAYQERLLALYRERPDFVTPE 189

Query: 287 -YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYF 341
            Y   +     +      + R    +   + GD      +  D    Y       D A  
Sbjct: 190 KYRNEIVAFVERGLTDLSISRSTFDWGVPVPGDPKHVMYVWVDALTNYITGTGFPDAASP 249

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           + K+    D   +V+G D    + R  A+        A + V    +   +      KMS
Sbjct: 250 RAKF-WPADA--HVIGKD----ITRFHAIYWPAFLMSAGLLVPKQIVTHGFLFNRGEKMS 302

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ I    +  E G D  R+ +L  
Sbjct: 303 KSIGNVIDPFALAKEYGVDPFRYFLLRE 330


>gi|212695897|ref|ZP_03304025.1| hypothetical protein ANHYDRO_00430 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677020|gb|EEB36627.1| hypothetical protein ANHYDRO_00430 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 493

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 100/291 (34%), Gaps = 34/291 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       L+     + TR +        + TL  S  
Sbjct: 9   APSPTGYLHIGGLRTALFNYLYARHTGGKMLLRIEDTDRTR-FVEGALENLLKTLKWSGI 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  + + +  + E    G Y++   V   + DKY  +L+   +  +        +  
Sbjct: 68  EIDEGVMLDENGQVTEKGNCGPYIQSDRVKAGIYDKYIEKLIEEGK-AYYCFCSKERLDN 126

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +    + D   L  ++D               + +  + +A  G  Y   L  PK     
Sbjct: 127 LRARQKAD--GLTPKYDGLCR--------SLTLEEAKEKIA-NGEKYTVRLKLPKDTDIS 175

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + ++ F +    D  D+ L+K DG  TY     A     +E G  ++  V G + 
Sbjct: 176 FEDRIKGKITFNTN---DMDDQVLIKEDGYPTYHF---AVIVDDHEMGITHV--VRGDEW 227

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                +   +  A   +  +        +    +    K SKR GD +   
Sbjct: 228 ISSTPKHVFLYQAFGWEAPEYIH-----LPTVLNKDHKKYSKRNGDGMVED 273


>gi|260817050|ref|XP_002603400.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
 gi|229288719|gb|EEN59411.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
          Length = 531

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 128/429 (29%), Gaps = 82/429 (19%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH   AV+ DT+        ++  +       GA  +  +       +  L    + L
Sbjct: 10  HLGHLYSAVLADTIHR------WQQLK-------GAGGSVFSTGT---DEHGLKIQQAAL 53

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDLKALNIQ 255
             G  P  +   V +   D +S   +   +           +V+   + ++        +
Sbjct: 54  AHGKDPQQFCDDVSRHFRDLFSKSHVGHTDFIRTTESRHRKAVEHFWRKLQSAGYIYQGK 113

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           ++ + S  D      + + + +D    +       +       +Q   M  +  +FR + 
Sbjct: 114 YEGWYSTSDEAFVPDNKVMESVDKATGK------DIKVSIETGSQVEWMKEENYMFRLSE 167

Query: 316 VGDDVDRPLLKSDGSYTYF--------------AADLAYFKCKYER--------GFDNMI 353
            G  +    L S+    Y                 DL+  + +                I
Sbjct: 168 FGPRL-LEWLDSNPRAVYPDKYRTLVRGWLGEGLEDLSVSRQRDRLPWGIPVPDDPTQTI 226

Query: 354 YVM-GS------------DHSGY-----------VKRLEAVAA-----AVSEKKAQINVL 384
           YV   +            +H  +           + R  AV       A      +  V 
Sbjct: 227 YVWLDALVNYLTVCGYPDNHHAHWPADCHVVGKDIVRFHAVYWPAFLMAAGLDPPRSVVT 286

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDFCKVK 443
               +         KMSK  G+ +     +    +D +R+ +L     E   D+   KV 
Sbjct: 287 HSHWLM-----ESQKMSKSKGNVVDPFDRIQRYSADGLRYFLLKHGVLEADGDYSDEKVV 341

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHL 502
           +    +    +     RC +        FP    ++FP +     +   T E  +L+  L
Sbjct: 342 KVLNADLAGNIGGLLNRCLATSLNPTQTFPAFSANMFPVHPGTNSNTLATEEDYKLLKTL 401

Query: 503 AEYPRVIEN 511
            E P  ++ 
Sbjct: 402 QELPGSVDQ 410


>gi|168179187|ref|ZP_02613851.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670164|gb|EDT82140.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 881

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|157803821|ref|YP_001492370.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166231639|sp|A8EZ02|SYL_RICCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157785084|gb|ABV73585.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 834

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +    I      +  +      K  +  +   P+G +HVGH R   +GD +A  M   
Sbjct: 4   IEQKWQQIWDDEKAFEVSNECNKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMNMQ 63

Query: 158 GYEV 161
           G+ V
Sbjct: 64  GFNV 67


>gi|56416247|ref|YP_153322.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197365170|ref|YP_002144807.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81821504|sp|Q5PJB8|SYV_SALPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56130504|gb|AAV80010.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096647|emb|CAR62262.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|46906470|ref|YP_012859.1| glutamyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226222866|ref|YP_002756973.1| glutamyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825719|ref|ZP_05230720.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853496|ref|ZP_05242844.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254932455|ref|ZP_05265814.1| glutamyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254991763|ref|ZP_05273953.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|300764638|ref|ZP_07074630.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461801|sp|Q724H5|SYE_LISMF RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|46879734|gb|AAT03036.1| glutamyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225875328|emb|CAS04025.1| Putative glutamyl-tRNA synthetase [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258606868|gb|EEW19476.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293584012|gb|EFF96044.1| glutamyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594963|gb|EFG02724.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514745|gb|EFK41800.1| glutamyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328467848|gb|EGF38888.1| glutamyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|328476080|gb|EGF46789.1| glutamyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332310648|gb|EGJ23743.1| Glutamyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 491

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 45/309 (14%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NIADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     +   
Sbjct: 61  QMTNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQQLLDEGL-AYKCY 111

Query: 233 VKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             +  + A  +  +   ++   + +      E                    QG+     
Sbjct: 112 CTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIR 158

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
              P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     
Sbjct: 159 FKVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +++   G DH     +   +  A   +      +      L  +    K+SKR G  I  
Sbjct: 213 HVLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQF 265

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 266 IEQYRDLGY 274


>gi|71908698|ref|YP_286285.1| valyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|90103535|sp|Q47BG6|SYV_DECAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71848319|gb|AAZ47815.1| valyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 943

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 73/265 (27%), Gaps = 46/265 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R+                  K     I     N TG +H+GH     + D L       G
Sbjct: 14  RRWYPEWETQNYFAAGVDASKADNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYYRMRG 73

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           +    +   + AG   QI      V  R   A              G+    +G+E    
Sbjct: 74  HNTLWQPGTDHAGIATQI------VVERQLDA-------------QGISRHDLGRE---- 110

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                  F E+ W    K+YS   + K +R     +    D          G    + + 
Sbjct: 111 ------KFLEKVWE--WKEYSGNTITKQMR----RMGTSPDWKRERFTMDAGLNKVVTET 158

Query: 277 IDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
              L  +G +Y G         L    S      + +   +      + D  D  ++ + 
Sbjct: 159 FVRLFNEGLIYRGKRLVNWDPKLNTAVSDLEVVQEEEDGFMWHIRYPLADGSDSLVVATT 218

Query: 329 GSYTYFAADLAYFKCKYERGFDNMI 353
                   D A      +  + +MI
Sbjct: 219 -RPETMLGDTAVMVHPEDERYKHMI 242


>gi|28868479|ref|NP_791098.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|81732156|sp|Q887M3|SYV_PSESM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28851717|gb|AAO54793.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|13470650|ref|NP_102219.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|25009388|sp|Q98MV8|SYM_RHILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14021392|dbj|BAB48005.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 516

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 98/321 (30%), Gaps = 29/321 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D LA      G +V      ++ G ++   A        QAL +
Sbjct: 15  PNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTA-EKEGITPQALAD 73

Query: 192 NDSDL------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQA 240
            +S +        G     Y++           +          + +           +A
Sbjct: 74  RNSAIFRSMTEAVGGSNDEYIRTTEPRHYASCQAIWKAMAANGDIYLDRYSGWYSVRQEA 133

Query: 241 MMKIIRDDLKALNIQHDIFIS-----EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                   L    ++ +   S     E++ +    S  +D +  L      + G      
Sbjct: 134 YFDESETTLGEDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQPDFVGPAERRN 193

Query: 296 SKTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
              +      +   + R+T      + GDD     +  D    Y  A   Y   K ++  
Sbjct: 194 EVMSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITA-AGYPDTKSDQWR 252

Query: 350 DN-MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                +++G D    + R  AV        A I +        +      KMSK  G+ +
Sbjct: 253 YWPATHIIGKD----IVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKMSKSVGNVV 308

Query: 409 TLRHVVDEVGSDSVRFMMLWR 429
               +++  G D VR+  L  
Sbjct: 309 DPFALIEHYGLDQVRYFFLRE 329


>gi|331015239|gb|EGH95295.1| valyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|329295902|ref|ZP_08253238.1| valyl-tRNA synthetase [Plautia stali symbiont]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N               N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDTSQESFCTMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMLGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + ++   L ++  +Y G          +    D +
Sbjct: 152 AVNEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|325860111|ref|ZP_08173237.1| isoleucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482396|gb|EGC85403.1| isoleucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 1221

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 69/306 (22%), Positives = 110/306 (35%), Gaps = 53/306 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +++   E     V   +   E A        N  +
Sbjct: 576 LNDW-----NLSRSRFWGTPLPIWRDENR-GEKCIGSVEELYNEIEKAVAAGVMDRNPLK 629

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDN----L 280
           E    +V D+S +      R DL    +   + ++E+    HR +   I    D+     
Sbjct: 630 EAGF-VVGDFSQE---NYDRIDLHRPYVDEIVLVNEEGRPMHR-EADLIDVWFDSGSMPY 684

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+  Y +EG +     K T K + + ++ L  ST  G  V      +D            
Sbjct: 685 AQLHYPFEGEINAEGLKATGKTEAEYRRELVHSTYEGTAVPPAFFPAD------------ 732

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                       I   G D   G+   L A+A  V +  A  NV+   LV    D    K
Sbjct: 733 -----------FINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLV---LDAKGNK 777

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPV 451
           MSK  G+      ++ + G+D VRF M+      + L FD   V E  ++          
Sbjct: 778 MSKHVGNVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDECRRKFFGTLYNTYS 837

Query: 452 FYVQYA 457
           F+  YA
Sbjct: 838 FFALYA 843


>gi|291616047|ref|YP_003518789.1| ValS [Pantoea ananatis LMG 20103]
 gi|291151077|gb|ADD75661.1| ValS [Pantoea ananatis LMG 20103]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|255003244|ref|ZP_05278208.1| glutamyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255004371|ref|ZP_05279172.1| glutamyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 542

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 93/312 (29%), Gaps = 60/312 (19%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +   + G      I   + +PTG +H+G  R A+     A                   G
Sbjct: 67  HPAWVCGAEIVRVITRFAPSPTGSLHLGGARTALFNWLFARR----------------HG 110

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q          R +       S+          ++ +           ++     +   
Sbjct: 111 GQF-------LLRMEDTDQERSSETVAQSI----IEDMAWLGLHHDQDVVIQSARRERHT 159

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF------HRGDPSPIRDIIDNLARQGY 285
            V             ++L A    +  + SEDD       H  +    R    +     +
Sbjct: 160 QVA------------EELLARGKAYYCYCSEDDIAAEKLRHENEGKHYRHHCPS-RDANH 206

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKC 343
              G     + K+ +  ++     ++    V  +   D  +L+S+G  TY    LA    
Sbjct: 207 AQSGTAGVLRLKSPENREIKFTDGVYGEISVSSEQIDDMVILRSNGHPTYL---LAVVVD 263

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK- 402
            ++    ++I   GSDH     +   +A A+     Q        + L  D    K+SK 
Sbjct: 264 DHDMCITHIIR--GSDHITNTIKQMLLAEAMGWDNPQFCH-----IPLIHDEGGAKLSKR 316

Query: 403 -RAGDFITLRHV 413
            RA      R +
Sbjct: 317 NRAPGVHEYREL 328


>gi|213968388|ref|ZP_03396532.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384653|ref|ZP_07233071.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302059577|ref|ZP_07251118.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302133007|ref|ZP_07258997.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213927026|gb|EEB60577.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|195485094|ref|XP_002090947.1| Aats-val [Drosophila yakuba]
 gi|194177048|gb|EDW90659.1| Aats-val [Drosophila yakuba]
          Length = 1049

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 58/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP ++     S       +                K  +     N TG +H+GH     +
Sbjct: 95  SPRFVEAQWYSWWEKEGFFTPEYGRASIDDPNPNGKFVMIIPPPNVTGSLHLGHALTNAI 154

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 155 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 196

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I + LK+L   +D         
Sbjct: 197 -------------SRHDLGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWTRVAFTMD 242

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 243 PKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 281


>gi|182685006|ref|YP_001836753.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691139|sp|B2IMY9|SYE_STRPS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|182630340|gb|ACB91288.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGVVHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEAAGETPRYINEYLGMSEEEK------AAYIAEREAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|76579652|gb|ABA49127.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 1002

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 52  TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 111

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 112 DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 140

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 141 ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 196

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 197 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 249


>gi|32491043|ref|NP_871297.1| hypothetical protein WGLp294 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81741734|sp|Q8D2R0|SYI_WIGBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25166249|dbj|BAC24440.1| ileS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 940

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 31/261 (11%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            + H      I  +   + ++G   +      KS+   K D D+ + +  +  V  D   
Sbjct: 484 KEIHPNTVELIEKVSKKIEKKGV--QAWWDINKSEILDK-DSDKYKKVLDTLDVWFDS-- 538

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQI 381
                    TY++  +  +    +   D  +Y+ GSD   G+      ++ A++      
Sbjct: 539 -------GSTYYSILIKKWNSLNKNKVD--LYLEGSDQYRGWFMSSIILSIAITGGIPCK 589

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +L    V    D    KMSK  G+ I+ + +++E G+D +R  +        +      
Sbjct: 590 KILAHGFVV---DSNGKKMSKSIGNVISPKDIINEFGADILRLWVASSDYKSDISISKEI 646

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +               Y R R+  R       D + +    N I  E+     +  +I  
Sbjct: 647 LLRTVDI---------YRRIRNTSRFLLSNLNDFNPEF---NSINLENMLSIDQWAIIKT 694

Query: 502 LAEYPRVIENATIAQEPYKLA 522
                + I+NA      +K+ 
Sbjct: 695 NNR-QKKIKNAYEEYNFHKVV 714


>gi|327396299|dbj|BAK13721.1| valyl-tRNA synthetase ValS [Pantoea ananatis AJ13355]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|284007685|emb|CBA73427.1| valyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 965

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 60/213 (28%), Gaps = 32/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + + L +       +  +         I     N TG +H+GH     + DTL    
Sbjct: 21  PAAIEQPLYAHWEKNGYFAPHGDNSKQSFCIVIPPPNVTGNLHMGHAFQQTIMDTLIRYQ 80

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                               V ++++
Sbjct: 81  RMQGKNTLWQSGTDHAGIATQMV-------------------------------VERKIS 109

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            + +    ++  E ++  +  +  ++    I   ++ L    D         +G    ++
Sbjct: 110 AEENKTRHDYGREAFIEKIWQWKAESG-GNISQQMRRLGDSVDWQRERFTMDKGLSKAVK 168

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L +   +Y G               D +
Sbjct: 169 EAFIRLYQDDLIYRGKRLVNWDPKLHTAISDLE 201


>gi|226307287|ref|YP_002767247.1| valyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226186404|dbj|BAH34508.1| valyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 894

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 78/268 (29%), Gaps = 41/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    V    +  +        +I     N TG +H+GH     + D L+  
Sbjct: 22  DPSAVEADLYQGWVDAGYFQADATSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDVLSRR 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 82  KRMQGYEVL-------WLPGMDHAGIATQSVVEKQLAAD--------------------- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ +    D          G    +
Sbjct: 114 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGGQMRRIGDGVDWSRDRFTMDEGLSRAV 168

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           + +   +  +G +Y          +L    S    K +    +L+       DD +  ++
Sbjct: 169 QTVFKRMFDEGLIYRAERLVNWSPVLQTAISDIEVKFEDVEGELVSLRYGSLDDNEPHVI 228

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 229 VATTRVETMLGDTAVAVHPEDERYKHLI 256



 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 39/222 (17%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV   E++ A   +  AQ+      L  L RD    KMSK  G+ I     VD  G+D++
Sbjct: 510 YVSEDESITAGPGKSGAQMPFKDVFLHGLVRDQYGKKMSKSRGNGIDPLDWVDRFGADAL 569

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF +    N    D    +   QS  N                 +  +       +    
Sbjct: 570 RFTLARGANPGS-DLSVGEDSAQSSRN--------------FATKLFNATKFALMNGAAP 614

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIE----NATIAQEPYKLAFYLYDLASVFHGHWSH 538
             +P  SE   ++  ++  L      ++     A    E  K          +FH  W  
Sbjct: 615 APLPARSELTDADRWILDRL----DTVQAEADAAFDRYEFSKACE------GLFHFAWDE 664

Query: 539 GRE--NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN-II 577
             +      +   A +  +            +++ + L+ ++
Sbjct: 665 VCDWYLELAKVQFAADEAV-------AANTRAVLGNVLDALL 699


>gi|219685228|ref|ZP_03540048.1| cysteine--tRNA ligase [Borrelia garinii Far04]
 gi|219673324|gb|EED30343.1| cysteine--tRNA ligase [Borrelia garinii Far04]
          Length = 480

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 120/337 (35%), Gaps = 43/337 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 G+ +  + K   + +  +        P++  +      ++  ++KI+ +     
Sbjct: 85  KTAREKGLTVYEISKFFTEAFFKDCRKLNVVYPDKVLIASKHIPNMIEVVKILEEKKITY 144

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +++     F         D+ID      +    I    ++KT          L F 
Sbjct: 145 FSNGNVYFDTSCFKSYGEMAGIDLID--KDMTFSRVDIDKFKRNKTDFV-------LWFT 195

Query: 313 STMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--YVKR 366
           ++   D     D P       + Y +  L       E   D + I++ G DH G  ++  
Sbjct: 196 NSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHHINE 250

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFM 425
           +  V   +++K   I V    L+  Y      KMSK  G+FIT++ + ++       R++
Sbjct: 251 IAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSHGNFITVKDLEEQNFSPLDFRYL 305

Query: 426 MLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAYAR 460
            L       L F F   K  + ++EN +  + Y YA 
Sbjct: 306 CLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYAS 342


>gi|120610672|ref|YP_970350.1| valyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120589136|gb|ABM32576.1| valyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 963

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 56/202 (27%), Gaps = 45/202 (22%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG--AQINT 176
           +G    I+    N TG +H+GH     + D+LA      G+        + AG   QI  
Sbjct: 55  RGENFAIQLPPPNVTGTLHMGHAFNQTIMDSLARYHRMRGHNTLWVPGTDHAGIATQI-- 112

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               V  R  Q                            +  +   +   E +   V ++
Sbjct: 113 ----VVERQLQ----------------------------EQGASRHDLGREAFTRKVWEW 140

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG------- 289
             ++    I   ++ L    D               + D    L  QG +Y G       
Sbjct: 141 KEKSG-NTITTQMRRLGDSVDWSREYFTMDDKLSKVVTDTFVRLYEQGLIYRGKRLVNWD 199

Query: 290 -ILPPPKSKTTQKCDMDRKQLL 310
            +L    S    + +     L 
Sbjct: 200 PVLQSAVSDLEVESEEKDGSLW 221


>gi|81429270|ref|YP_396271.1| methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|78610913|emb|CAI55965.1| Methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 681

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 118/345 (34%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    +  D +A      G++V                   +    +  L  
Sbjct: 17  PSGKLTIGNSYTTIAADVIARYKRLMGFDVF-----------------FLTGTDEHGLKL 59

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +   P  Y+  + +E+   +  + L    +K++    DY V+A+ KI    ++ 
Sbjct: 60  EQKAAEKNLAPQAYVDGMAEEIQALW--KTLEISNDKFIRTTDDYHVKAVQKIFDRLVEQ 117

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   Q++ + S  D      S + ++  +   +   G    G      ++ T K  M 
Sbjct: 118 GDIYLGQYEGWYSVSDEEYFTESQLTEVYKDENGKVIGGKAPSGHEVQRVAEETYKFKMS 177

Query: 306 RKQLLFRS--TMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERGFD------NMIY 354
           +      +      D ++    K++    +      DL+  +  ++ G        +++Y
Sbjct: 178 KYADRLLAYYEEHADFIEPSSRKNEMINNFIKPGLEDLSVSRISFDWGIHVTGNPKHVVY 237

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQIN-----------------V 383
           V              GSD      +   A    V ++  + +                  
Sbjct: 238 VWLDALSNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFLMALGLPLPKQ 297

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           +      L +DG   KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 298 IFGHGWLLMKDG---KMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|24374934|ref|NP_718977.1| valyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81460030|sp|Q8EBS5|SYV_SHEON RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24349646|gb|AAN56421.1|AE015778_9 valyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 958

 Score = 45.7 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPQSIEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +      +   + ++  V ++  Q+   I +  L+ +    D          G   
Sbjct: 93  KLEAEEGKSRHDLGRDVFMEKVWEWKAQSGGTITKQ-LRRMGASVDWDRERFTMDEGLSK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|330963190|gb|EGH63450.1| valyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGAGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|254465904|ref|ZP_05079315.1| glutamyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206686812|gb|EDZ47294.1| glutamyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 466

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 90/291 (30%), Gaps = 41/291 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+  +   + +PTG +H+G  R A+     A      G +        D          +
Sbjct: 2   TQPVVTRFAPSPTGFLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRERSTPEATAA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +         ++D ++   +        V  +L  +       F  ++ +   ++ +   
Sbjct: 59  ILQGMAWLGLDHDGEVISQFERADRHAEVANQLLAE-GKAYKCFATQEEIAAFREQAKAE 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                                +   +R   SP RD           Y   +  P+   T 
Sbjct: 118 --------------------GKSTLYR---SPWRDAGAASHPDAP-YVIRIKAPQDGVTV 153

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH
Sbjct: 154 IKDQVQGDVTIRNDQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                R   +  A+        V +   + L       K+SKR G      
Sbjct: 206 LNNAARQMMIYEAMGWD-----VPVWAHIPLIHGPDGKKLSKRHGALGAQE 251


>gi|118475143|ref|YP_891906.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166231210|sp|A0RNX3|SYL_CAMFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118414369|gb|ABK82789.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 811

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +G    ++      K  +      P+G +H+GH R   +GD L+      G
Sbjct: 10  YKWQQIWKKNGYSEPKDDYSLPKKYILSMF-PYPSGRLHMGHVRNYSIGDALSRYYRNRG 68

Query: 159 YEV 161
           Y V
Sbjct: 69  YNV 71


>gi|2500981|sp|Q43794|SYE_TOBAC RecName: Full=Glutamyl-tRNA synthetase,
           chloroplastic/mitochondrial; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS; Flags:
           Precursor
 gi|603867|emb|CAA58506.1| glutamate--tRNA ligase [Nicotiana tabacum]
          Length = 569

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 96/287 (33%), Gaps = 48/287 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R              +    
Sbjct: 61  APSPTGNLHVGGARTALFNYLYARAKGGKFILRIEDTDLERS----------TKESEEAV 110

Query: 183 WRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R    L     + P  G   G Y +     L  +++ +LL      +     +  ++ M
Sbjct: 111 LRDLSWLGPAWDEGPGIGGEYGPYRQSERNALYKQFAEKLLQSG-HVYRCFCSNEELEKM 169

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +I +  LK L   +          R   +   ++++ LA +G  Y      PK  + + 
Sbjct: 170 KEIAK--LKQLPPVYTG--------RWASATEEEVVEELA-KGTPYTYRFRVPKEGSLKI 218

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGS 358
            D+ R ++ +    +GD     +++S+G   Y      D A           ++I     
Sbjct: 219 DDLIRGEVSWNLDTLGDF---VIMRSNGQPVYNFCVTVDDAT------MAISHVIR--AE 267

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +H     R   +  A+              V L       K+SKR G
Sbjct: 268 EHLPNTLRQALIYKALGFPMPHFAH-----VSLILAPDRSKLSKRHG 309


>gi|322386045|ref|ZP_08059684.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269889|gb|EFX52810.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 665

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 110/333 (33%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------- 178
           P+G +H+G     +  D LA      GY+V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAEEAGISPQAYVDG 75

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235
           ++V  +    L +   D         + K V        + + +   E      V D   
Sbjct: 76  MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIYLGEYAGWYSVSDEEF 135

Query: 236 YSVQAMMKIIRDDLKAL------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV--- 286
           ++   + ++ RD+   +      +     ++SE+ +          +++    Q      
Sbjct: 136 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 195

Query: 287 ---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y + 
Sbjct: 196 DGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPRHVVYVWFDALLNYVTA-LGYGQD 254

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
           ++   FD         ++G D    + R  ++      +         L+     + +DG
Sbjct: 255 EHG-NFDKFWNGTVFHMVGKD----ILRFHSIYWPVLLMMLDVKLPERLIGHGWFVMKDG 309

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 310 ---KMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|322388105|ref|ZP_08061711.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141126|gb|EFX36625.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 712

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 122/394 (30%), Gaps = 78/394 (19%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEY-GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           F+N +L    L+   + ++   +    +  I       I      P+G +H+G     + 
Sbjct: 17  FLNGFLYRKSLKMWYNEVLEKQVSLAWKGNIMSEKNFYITTPIYYPSGKLHIGSAYTTIA 76

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D LA      GY+V                 L    +  Q         P+ Y  G   
Sbjct: 77  CDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAEEAGITPQAYVDG--- 121

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI---QHDIFISED 263
                 +  K   +LL+   +K++    DY  + + ++    L   +I   ++  + S  
Sbjct: 122 ----MAVGVKDLWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVS 177

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD----- 318
           D      S + ++  +    G V  GI P       +   +  +    R +   D     
Sbjct: 178 DEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEESYFLRLSKYQDRLVEF 231

Query: 319 -DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------FDNMIYVM-GS---- 358
                  +  DG               DLA  +  +  G        +++YV   +    
Sbjct: 232 FKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNY 291

Query: 359 ---------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRD-------------- 394
                    DH+ Y K        +  +   + + +   ++ +  D              
Sbjct: 292 ATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIAHGWFV 351

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 352 MKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 385


>gi|291277218|ref|YP_003516990.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964412|emb|CBG40262.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 806

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G     +      K  +      P+G +H+GH R   +GD +A      G
Sbjct: 10  AKWQEYWQAHGSFEPLDDTTLPKKYILSMF-PYPSGALHMGHVRNYCIGDAMARHYRKQG 68

Query: 159 YEV 161
           + V
Sbjct: 69  FNV 71


>gi|255526146|ref|ZP_05393066.1| glutamyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296185041|ref|ZP_06853451.1| glutamyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510129|gb|EET86449.1| glutamyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296049875|gb|EFG89299.1| glutamyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 484

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 103/303 (33%), Gaps = 46/303 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E ++         L +
Sbjct: 9   APSPTGYMHVGNLRTALYAYLIAKHENGDFILRI-----EDTDQERFVE------GALDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++     +  +Y+ +L+   E             
Sbjct: 58  IYNTLKVTGLKHDEGP-DIGGPVGPYVQSERTNIYIEYAKQLIEKGEA------------ 104

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ ++ L  + +   +   + +   S  ++ I+     G  Y      P + TT
Sbjct: 105 YYCFCSKERMETLRAEAEANNTAAKYDKHCLSLSKEEIEEKLASGIPYVIRQNNPSTGTT 164

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   ++ +    D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 165 SFEDDIYGTITVDNSELD---DMILIKSDGFPTY---NFANVVDDHLMGITHV--VRGSE 216

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +     +   +  A         V +             K+SKR GD      +      
Sbjct: 217 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDTHHKLSKRNGDASFEDLMAKGYLK 271

Query: 420 DSV 422
           D++
Sbjct: 272 DAI 274


>gi|255325490|ref|ZP_05366592.1| valine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297428|gb|EET76743.1| valine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 906

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 32/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    V    +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 24  PQAVEKDLYEGWVEKGYFTPDANSEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 83

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++   + +  L   +                     
Sbjct: 84  RMQGYATL-------WLPGADHAGIATQTKVEAKLKETE--------------------- 115

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                +  ++  E+++  V ++  Q     I++ ++A+    D          G    ++
Sbjct: 116 ---GKKRWDYEREEFIDKVWEWKEQYG-GTIQNQMRAIGDSVDWSRERFTLDDGLSRAVQ 171

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            I  NL  +G +Y+       S   +    D
Sbjct: 172 TIFKNLYDEGMIYQANRLVNWSPVLETAVSD 202


>gi|213586775|ref|ZP_03368601.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
          Length = 417

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|154245393|ref|YP_001416351.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159478|gb|ABS66694.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 894

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     K   +    GI   RN   +     +E     P+G +H+GH R  V+GD LA  
Sbjct: 24  AREAEPKWQKTWAERGIFRTRNDDPRPKFFVMEMF-PYPSGRIHIGHGRNYVMGDVLARY 82

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 83  KRMQGFNV 90


>gi|146321874|ref|YP_001201585.1| glutamyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145692680|gb|ABP93185.1| Glutamyl- and glutaminyl-tRNA synthetase [Streptococcus suis
           98HAH33]
 gi|292559294|gb|ADE32295.1| Glutamyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 501

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D    Q+  L 
Sbjct: 27  APSPTGLLHIGNARTALFNYLFARHHGGTFLIRI-----EDTDRKRHVEDGERSQLENL- 80

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  +LL   E K          
Sbjct: 81  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVDQLL--AEGKAYKSYVTEEE 128

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +            I      G V    L   ++  
Sbjct: 129 LAAERERQEAAGETPRYINEYLGMSE------DEKTAYIAEREAAGIVPTVRLAVNEAGI 182

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ + ++ F    +G   D  + K DG  TY   + A     Y     ++I   G 
Sbjct: 183 YKWNDIVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVIDDYLMKISHVIR--GD 235

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 236 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 285


>gi|58039702|ref|YP_191666.1| isoleucyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819090|sp|Q5FRI6|SYI_GLUOX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58002116|gb|AAW61010.1| Isoleucyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 960

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 90/302 (29%), Gaps = 47/302 (15%)

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D + ++ I++    +G        P       +   D +Q+         D+     +S 
Sbjct: 534 DAAVMQRIVEAFREKGADIWYEADPSLFLGEGRNPADYEQVF--------DIVDVWFESG 585

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
            ++ +               F   +Y+ GSD   G+ +    +  +V          L  
Sbjct: 586 STHRFDLGQ-------EGLNFPADLYLEGSDQHRGWFQSS--LLESVGTMGVAPYKALVT 636

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                 D    KMSK  G+ +    V + +G+D +R  +L    +E L      +K+Q +
Sbjct: 637 NG-FVMDEQGRKMSKSLGNVVAPSDVTESLGADILRLWVLNSDTNEDLRIGQDILKQQGE 695

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                     Y R R+  R           D F        ++    E  ++  L E   
Sbjct: 696 L---------YRRLRNTLRWLLGA-----LDGFTPEEAVSYADLPPLEQYILHRLTELRG 741

Query: 508 VIENATIAQ-------EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560
           +I +A             +          +     +   R++        ++      R 
Sbjct: 742 LIASAVETHQWVGVYPALHGFCT------TDLSAFYFDIRKDAIYCDA-PSDPTRRAART 794

Query: 561 QL 562
            L
Sbjct: 795 VL 796


>gi|116617448|ref|YP_817819.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096295|gb|ABJ61446.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 894

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 67/243 (27%), Gaps = 40/243 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  K L +   +    G     +    +I     N TG +H+GH     + D +    
Sbjct: 21  DNWQSKKLFAPESNKEIQG----NEPEPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 76

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++             ++   ++   + +Q L                         
Sbjct: 77  RMQGFDTL-------WLPGMDHAGIATQAKVEQRLRGE---------------------- 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   EK++  V D+        I+     + +  D          G    + 
Sbjct: 108 ---GVSRYDLGREKFVEQVWDWK-NEYATTIKQQWGKMGLSLDFDRERFTLDEGLNKAVN 163

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +  +L  +G +Y G          +    D +  +      G         +DG+ T+ 
Sbjct: 164 KVFIDLYNKGLIYRGEYIINWDPQARTALSDIE--VIYQDDAGAFYHVKYPFTDGT-TFD 220

Query: 335 AAD 337
             D
Sbjct: 221 GKD 223



 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 97/286 (33%), Gaps = 41/286 (14%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            D  V+ +     D           ++       G   P     +    Q  +Y G   P
Sbjct: 390 DDEKVEFVPARFEDTFSRWMENIRDWVISRQLWWGHQIP-AWYKNKGTDQEELYVGTEAP 448

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                 +  D+      F S +          K DG +  +     Y       G+D +I
Sbjct: 449 AGDGWERDPDVLD--TWFSSALWPFSTMGWPEKLDGDFARY-----YPTNTLVTGYD-II 500

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +         V R+       + ++   NVL+  L+   RDG   KMSK  G+ +    V
Sbjct: 501 FFW-------VARMMFQGKEFTGQRPFKNVLIHGLI---RDGEGRKMSKSLGNGVDPMDV 550

Query: 414 VDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++ G+D++R+ ++      + L F + K+              A+     I+  ++ + 
Sbjct: 551 IEKYGADALRWFLVTGSTPGQDLRFTYEKMDS------------AWNFINKIWNASRYVI 598

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQ 516
            +LD D          +  D S+L L     L+    V+ N T   
Sbjct: 599 MNLDED-------TPSTLPDMSQLTLADQWILSRLNTVVTNVTRNF 637


>gi|209558897|ref|YP_002285369.1| methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540098|gb|ACI60674.1| Methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 666

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGISPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERSDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|152993621|ref|YP_001359342.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425482|dbj|BAF72985.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 813

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +             +  +   +  K  I  +   P+G +H+GH R   +GD  A  
Sbjct: 4   NPNEIEAKWQKKWDEEQAFEPSDSHEQKKKYILSMFPFPSGRLHMGHVRNYAIGDAFARY 63

Query: 154 MAFSGYEV 161
                + V
Sbjct: 64  YRKQNFNV 71


>gi|269966353|ref|ZP_06180439.1| Valyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829030|gb|EEZ83278.1| Valyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 952

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|258542335|ref|YP_003187768.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633413|dbj|BAH99388.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636472|dbj|BAI02441.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639525|dbj|BAI05487.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642581|dbj|BAI08536.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645636|dbj|BAI11584.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648689|dbj|BAI14630.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651742|dbj|BAI17676.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654733|dbj|BAI20660.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 897

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 54/201 (26%), Gaps = 33/201 (16%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N    P+ +   L  +  S   +            I     N TG +H+GH     + D
Sbjct: 2   LNKSFEPAQIETRLYELWESRKAFSAQPDSGKKPFTIMIPPPNVTGTLHMGHALTMTLQD 61

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G++   +   + AG     +                               
Sbjct: 62  TLIRWKRMQGFDTLWQPGTDHAGIATQMVVERTLA------------------------- 96

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                             + ++  V ++  Q+   I +  L+ L    D          G
Sbjct: 97  -------TEGKTRQEMGRDAFIERVWEWKEQSGGGITKQ-LRRLGASLDWPRERFTMDEG 148

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               +R++   L  +G +Y  
Sbjct: 149 LSRAVREVFVTLYNEGLIYRD 169



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 23/117 (19%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   ST+   D    L +      Y+  D+         GFD +I+         V R+
Sbjct: 476 ALWPFSTLGWPDKTPELAR------YYPTDV------LVTGFD-IIFFW-------VARM 515

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             +           N+ +  LV   RD    KMSK  G+ I    ++D+ G+D++RF
Sbjct: 516 MMMGQHFMHDVPFRNIFIHGLV---RDEHGQKMSKSKGNGIDPLELIDQYGADAMRF 569


>gi|167738900|ref|ZP_02411674.1| valyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167903004|ref|ZP_02490209.1| valyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167911243|ref|ZP_02498334.1| valyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|237811974|ref|YP_002896425.1| valine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237506350|gb|ACQ98668.1| valine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|134282390|ref|ZP_01769095.1| valyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246428|gb|EBA46517.1| valyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|158521740|ref|YP_001529610.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510566|gb|ABW67533.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 884

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 58/204 (28%), Gaps = 38/204 (18%)

Query: 93  LSPSYLRKILSS-----IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L   Y+ + +            +             +I     N TG +H+GH     + 
Sbjct: 6   LDKGYVAQGVEQRWYDFWEKEKLFAASEEGHGRPGYSIVIPPPNVTGMLHMGHALNITLQ 65

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G  V                           L+   +D        V  K
Sbjct: 66  DILCRYRRLCGDNV---------------------------LWVPGTDHAGIATQNVVEK 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  E  D+++        + ++  V  +  +    IIR  LK L    D          
Sbjct: 99  KLMAEGTDRHA-----LGRQAFIDRVWAWRKEYGGTIIRQ-LKRLGASCDWDRERFTMDD 152

Query: 268 GDPSPIRDIIDNLARQGYVYEGIL 291
           G    +R++   L R+G +Y G  
Sbjct: 153 GLSRAVREVFVRLHREGLIYRGEY 176


>gi|71910158|ref|YP_281708.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|25009390|sp|Q9A178|SYM_STRP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71852940|gb|AAZ50963.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 665

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 110/333 (33%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 74  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 134 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLVAFFKERPDFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y + 
Sbjct: 194 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-RQ 251

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 252 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 337


>gi|55821786|ref|YP_140228.1| glutamyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55823704|ref|YP_142145.1| glutamyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116628502|ref|YP_821121.1| glutamyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|67461637|sp|Q5LXZ7|SYE_STRT1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|67461640|sp|Q5M2K1|SYE_STRT2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|122266903|sp|Q03IP7|SYE_STRTD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|55737771|gb|AAV61413.1| glutamyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55739689|gb|AAV63330.1| glutamyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116101779|gb|ABJ66925.1| glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase
           [Streptococcus thermophilus LMD-9]
 gi|312279129|gb|ADQ63786.1| Glutamyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 484

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 53/298 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q++ L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLDNL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                R+    ++   +  E Y        Y K++ + LA+  + +     EE      +
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
             +     + I + L     +   +I+E +                   G +    L   
Sbjct: 119 QEAAGETPRYINEFLGMTEEEKAAYIAERE-----------------AAGIIPTVRLAVN 161

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +S   +  D+ +  + F    +G   D  + K DG  TY   + A     ++    ++I 
Sbjct: 162 ESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDHDMQISHVIR 216

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             G DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 217 --GDDHIANTPKQLMVYEALGWEAPEFGH----MTLITNSETGKKLSKRDTNTLQFIE 268


>gi|53725445|ref|YP_102654.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642677|ref|ZP_00441430.1| valine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121598960|ref|YP_992791.1| valyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385477|ref|YP_001026421.1| valyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449698|ref|YP_001080307.1| valyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167001552|ref|ZP_02267347.1| valine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254177748|ref|ZP_04884403.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254199591|ref|ZP_04905957.1| valyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254358691|ref|ZP_04974964.1| valyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81824041|sp|Q62KW5|SYV_BURMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52428868|gb|AAU49461.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227770|gb|ABM50288.1| valyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293497|gb|ABN02766.1| valine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242568|gb|ABO05661.1| valine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147749187|gb|EDK56261.1| valyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|148027818|gb|EDK85839.1| valyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698787|gb|EDP88757.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238523864|gb|EEP87300.1| valine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062657|gb|EES44843.1| valine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|53719592|ref|YP_108578.1| valyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126452676|ref|YP_001065962.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167719902|ref|ZP_02403138.1| valyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167846030|ref|ZP_02471538.1| valyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894601|ref|ZP_02482003.1| valyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167919265|ref|ZP_02506356.1| valyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217423755|ref|ZP_03455256.1| valine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242315662|ref|ZP_04814678.1| valine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254180039|ref|ZP_04886638.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254197804|ref|ZP_04904226.1| valyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|81824730|sp|Q63TI8|SYV_BURPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52210006|emb|CAH35979.1| putative valyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126226318|gb|ABN89858.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|169654545|gb|EDS87238.1| valyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184210579|gb|EDU07622.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217393613|gb|EEC33634.1| valine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242138901|gb|EES25303.1| valine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|332704041|ref|ZP_08424129.1| Isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554190|gb|EGJ51234.1| Isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 939

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 19/186 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G+D   G+       +     +    +VL    V    DG   KMSK  G+ +  +
Sbjct: 564 LYLEGTDQHRGWFHSSLLASIGTRARPPYKSVLTHGYVV---DGEGRKMSKSLGNVVAPQ 620

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++D+ G++ +R  +      E +      +              AY R R+  R    +
Sbjct: 621 EIIDKYGAEVLRLWVSAVNYQEDVRISSEILDRLVD---------AYRRIRNTCR--FIL 669

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-S 530
               DF         +    D   L L      + + +  A    E +K+   L++L  +
Sbjct: 670 GNLSDFSPDKAVPFAEMGPVDRYALDLFR--LNFEK-VREAYQDFEFHKVFHTLHNLCVT 726

Query: 531 VFHGHW 536
                +
Sbjct: 727 DLSAFY 732


>gi|330447396|ref|ZP_08311045.1| isoleucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491587|dbj|GAA05542.1| isoleucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 930

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 67/172 (38%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+ +K     VL    V    DG   KMSK  G+ +  +
Sbjct: 551 LYLEGSDQHRGWFQSSLISSVAMKDKAPYKQVLTHGFVV---DGQGRKMSKSIGNVVAPK 607

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 608 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTARFFLAN 658

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               + +    + +P E         +   +A    ++++   A   + +  
Sbjct: 659 LHGFNPE---TDCVPAEEMVALDRWAVGRAMAAQAEIVKD-YEAYNLHAVTQ 706


>gi|311281184|ref|YP_003943415.1| valyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750379|gb|ADO50131.1| valyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|284052168|ref|ZP_06382378.1| leucyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291570532|dbj|BAI92804.1| leucyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 859

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K  ++    G+        K     +      P+G +H+GH R   + D +A L    G
Sbjct: 12  QKWQNTWAEQGLYQTHQDPNKPKFYALSMF-PYPSGSLHMGHVRNYTITDVIARLKRMQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YRV 73


>gi|255660428|ref|ZP_05405837.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 757

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 64/188 (34%), Gaps = 35/188 (18%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L  I  +   +            +     N TG +H+GH     + D +       G+  
Sbjct: 20  LYEIWNNAGFFKPKDKNNSFTAIL--PPPNLTGTLHIGHAFEVSITDQIMRFKKMQGFS- 76

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
               +I       +   ++   +Y++                         +A K + + 
Sbjct: 77  --INWI----PGFDHAGIATQTKYEK-------------------------IALKENQKY 105

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            +  ++K   ++ ++++    +II++ LK+L +  +   ++          + +   NL 
Sbjct: 106 FDADDDKKSEMIMNWALN-QSEIIKNQLKSLGVCLNWSETKFTLSEQANKIVNNCFKNLY 164

Query: 282 RQGYVYEG 289
             G++Y+ 
Sbjct: 165 ENGFIYQA 172


>gi|256823042|ref|YP_003147005.1| valyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796581|gb|ACV27237.1| valyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 923

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 69/268 (25%), Gaps = 44/268 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + + L         +          + I     N TG +H+GH     + D L   
Sbjct: 6   DPKSIEQNLYKTWEESDYFSPKGGDDSYCIMI--PPPNVTGSLHMGHAFQHTIMDALTRY 63

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +   +                                
Sbjct: 64  HRMKGDNTLWQPGSDHAGIATQMVVERLL------------------------------- 92

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK      +   E ++  V ++  ++   I R  ++ L    D             + +
Sbjct: 93  -DKEGKSRHDLGREAFIDKVWEWKEESGGTISRQ-MRRLGDSCDWSREAFTMDDDLSNAV 150

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            ++   L  +G +Y G         L    S    +   +   L      + D     ++
Sbjct: 151 LEVFVRLHEEGLIYRGQRLVNWDPKLLTAVSDLEVESHEEDGHLWHLKYPLSDGSGHLVV 210

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 211 ATT-RPETMLGDTAVAVHPEDERYQHLI 237


>gi|209876528|ref|XP_002139706.1| valyl-tRNA synthetase [Cryptosporidium muris RN66]
 gi|209555312|gb|EEA05357.1| valyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
          Length = 1045

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 32/195 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            +     S    S        + +  K  +     N TG +H+GH   + + D+L     
Sbjct: 35  DWDNLWCSCGFFSPNFERAKTLSQEEKFVMALPPPNVTGCLHIGHTLTSAIQDSLCRYHR 94

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
               EV      + AG    T+   +  + +    ++        Y          +   
Sbjct: 95  MCDKEVLWIPGTDHAGIATQTVVERILLKSENKSRHD--------YGRDEFLTRVWDWKK 146

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           KY +                         I   L+ L    D               +  
Sbjct: 147 KYGAN------------------------ICTQLRRLGCSFDWTREMFTMDEYMSKAVSQ 182

Query: 276 IIDNLARQGYVYEGI 290
              NL  QGY+Y G 
Sbjct: 183 AFINLFNQGYIYRGT 197


>gi|209523609|ref|ZP_03272163.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496014|gb|EDZ96315.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 859

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K  ++    G+        K     +      P+G +H+GH R   + D +A L    G
Sbjct: 12  QKWQNTWAEQGLYQTHQDPNKPKFYALSMF-PYPSGSLHMGHVRNYTITDVIARLKRMQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YRV 73


>gi|254417882|ref|ZP_05031606.1| glutamyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184059|gb|EDX79035.1| glutamyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 471

 Score = 45.7 bits (107), Expect = 0.023,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 98/289 (33%), Gaps = 42/289 (14%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +   +   +   + +PTG +H+G  R A+     A     +G  + R     D     + 
Sbjct: 1   MTSPSSTVVTRFAPSPTGYLHIGGARTALFNWLYAK--RHAGRFLIRVE-DTDRERSTDD 57

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              ++F          D + P   Y            AD++   +    E       +D+
Sbjct: 58  AVKAIFDGLSWLELFADEE-PVFQYSR----------ADRHREVVDQLLETG--HAYRDF 104

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +       +RD  KA          E  +    P      +D+LA    V       P+S
Sbjct: 105 TTAEETGRLRDAAKAERRAF-----ESPWRDRAP-----TVDDLALPHVVR---FRRPQS 151

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            T    D  +  + + +  +    D  LL+SDG+ TY   +LA     ++ G  ++I   
Sbjct: 152 TTVTVADEVQGAVSWSTNDLD---DLVLLRSDGAPTY---NLAVVVDDHDMGVTHVIR-- 203

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G DH     R   +  A+   +          + L       K+SKR G
Sbjct: 204 GDDHLNNAARQSLIYDALGWTRPTFAH-----IPLIHGPDGAKLSKRHG 247


>gi|326802913|ref|YP_004320731.1| glutamate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650723|gb|AEA00906.1| glutamate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 493

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 100/299 (33%), Gaps = 42/299 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT--------REYYINDAGAQINTLALS 180
           + +PTG +H+G+ R A+     A      G +          +    +   +QI+ L   
Sbjct: 10  APSPTGYLHIGNARTALFNYLFAR---HEGGDFIIRIEDTDKKRNVADGEKSQIDNL--- 63

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              ++    ++   + P  Y  G Y +    ++  KY  +L+   +  +      +  + 
Sbjct: 64  ---KWLGLDWDESPENPGQY--GPYRQSERYDIYQKYIDQLIEQGDAYY-----AFDTEE 113

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++  R   K          +  D    D    RD       +G         P+ +T  
Sbjct: 114 ELEAARQAQKEAGTMPHYEGTWRDRSDEDIQAARD-------EGRPETVRFRIPEGETYT 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM + Q+   S  +G D    + K D S TY   + A     +     +++   G DH
Sbjct: 167 FDDMVKGQVSIHSEDIGGDF--IIWKKDKSPTY---NFAVVVDDHLMAITHVLR--GDDH 219

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                +   +  A+  +      +   +  +       K+SKR G  I        +G 
Sbjct: 220 LSNTPKQIMIYQALGWEPP----VFGHMSLITSAETGKKLSKRDGSIIQFIEQYRALGY 274


>gi|307708494|ref|ZP_07644959.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615410|gb|EFN94618.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 665

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G D   +    +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWFDALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +++  G D +R+ ++ 
Sbjct: 290 DIKLPERLIGHGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMR 338


>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226735044|sp|B7GJ46|SYC_ANOFW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 465

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 110/341 (32%), Gaps = 42/341 (12%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + + +    E    L     K+ +          +H+G+ R A+V DT+   + F GYE
Sbjct: 4   QVYNTLTRKKEPFIPLEPNKVKMYV--CGPTVYNYIHIGNARPAIVFDTIRRYLQFRGYE 61

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V    Y+++     + L      R  + L  +   + E +    Y + +   L  K +  
Sbjct: 62  VQ---YVSNFTDVDDKLI-----RAARELGEDVPTIAERFI-EAYFEDI-TALGCKKADV 111

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                E   +  +  +  Q + K       A  +  D++     F           +D L
Sbjct: 112 HPRVTE--NIDTIIQFIEQLIEKGY-----AYEVDGDVYYRTRRFSDYG-KLSHQSVDEL 163

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
                   G       K     D     L   +       D P  K    +    + +A 
Sbjct: 164 KS------GARIEVGEKKEDPLDF---ALWKAAKEGEIYWDSPWGKGRPGWHIECSAMA- 213

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGMP 397
              KY     + I +            E   A + A++ K      L    + +  +   
Sbjct: 214 --RKY---LGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYINIDNE--- 265

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
            KMSK  G+FI +  ++ +V    +RF ML       +++ 
Sbjct: 266 -KMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRHPINYS 305


>gi|159485866|ref|XP_001700965.1| non-discriminatory gln-glu-trna synthetase [Chlamydomonas
           reinhardtii]
 gi|158281464|gb|EDP07219.1| non-discriminatory gln-glu-trna synthetase [Chlamydomonas
           reinhardtii]
          Length = 538

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 100/288 (34%), Gaps = 31/288 (10%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG++V + F + +PTG +HVG  R A+     A      G +        D        +
Sbjct: 33  KGSQVRVRF-APSPTGNLHVGGARTALFNWLYAR---KMGGKFILRVEDTDTARS-TRAS 87

Query: 179 LSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                R  + L  +  + P+ G   G Y +     +  + + +L+   +  +     D  
Sbjct: 88  EEAMVRDLKWLGLDWDEGPDVGGAHGPYRQSERTAIYKEMADKLVAEGK-AYPCFCTDEE 146

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++AM K   +  K L   +        + R   + +         QG  Y      P ++
Sbjct: 147 LEAMKKDAEE--KKLPPIYRGK-----WARATAAEVEAA----KAQGLPYCYRFRVPSNQ 195

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  D+ R ++ + +  +GD     LL+S+G   Y   +          G  +++    
Sbjct: 196 EVKIHDLIRGEVSWNTDTLGDF---VLLRSNGMPVY---NFCVAVDDALMGITHVLR--A 247

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            +H     R   +  A+              V L       K+SKR G
Sbjct: 248 EEHLPNTLRQMLIYQALGFPVPTFGH-----VSLILAPDKSKLSKRHG 290


>gi|76363441|sp|Q4J8J7|SYL2_SULAC RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
          Length = 942

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 7/131 (5%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +       +   +         K         P  P H+GH R  V GD  A  M   
Sbjct: 3   ISEKWQKEWENKRVFDATPDPNKKKFFTTIAFPYPNSPFHLGHGRTYVTGDIYARYMRMR 62

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYY-PGVYLKHVGKE 212
           GY V     ++    G  I  +A  V    ++   ++ +  ++P+      V    +   
Sbjct: 63  GYNVLFPMAFHY--TGTPIIAMADDVAKGDKELIDIFKSIYEIPDDVISKLVDPLFMANY 120

Query: 213 LADKYSSELLN 223
             ++    +  
Sbjct: 121 FKEEIKQAMKE 131


>gi|167824493|ref|ZP_02455964.1| valyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226192955|ref|ZP_03788567.1| valine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254188551|ref|ZP_04895062.1| valyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254297874|ref|ZP_04965327.1| valyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157806938|gb|EDO84108.1| valyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936230|gb|EDO91900.1| valyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|225935045|gb|EEH31020.1| valine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|126439704|ref|YP_001058710.1| valyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|162210068|ref|YP_333247.2| valyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254262061|ref|ZP_04953115.1| valine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|126219197|gb|ABN82703.1| valine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|254220750|gb|EET10134.1| valine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|304396393|ref|ZP_07378274.1| valyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355902|gb|EFM20268.1| valyl-tRNA synthetase [Pantoea sp. aB]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|289522932|ref|ZP_06439786.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503956|gb|EFD25120.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 927

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 84/229 (36%), Gaps = 26/229 (11%)

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            + +A    + E  +   +Y+ GSD   G+ +     + A   +     VL    +    
Sbjct: 538 TSHMAVLTTRPELKWPATMYLEGSDQHRGWFQTSLLTSVATRGRAPFEMVLTHGFIV--- 594

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +  + V+ + G+D +R  +        +      ++   +      
Sbjct: 595 DGEGRKMSKSLGNVVQPQEVIGKYGADILRLWVASTDYRNDIRISETILRNLVE------ 648

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA- 512
              +Y R R+  R    +    DFD    +V  +E E    E+ L   L++   VI    
Sbjct: 649 ---SYRRIRNTLR--YILGNLSDFDPHKDSVPFEEME----EMDL-WILSKLQGVISKVT 698

Query: 513 --TIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMM 558
                 E +   F ++ L  +     +     N    +V+A++ KL   
Sbjct: 699 KGFENFEFHVPTFTIHQLCVNELSAFY--LDVNKDRLYVEASDSKLRRS 745


>gi|192291624|ref|YP_001992229.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|238692568|sp|B3Q6P5|SYE_RHOPT RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|192285373|gb|ACF01754.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 473

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 97/305 (31%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+  +   + +PTG +H+G  R A+     A                        T+ L 
Sbjct: 2   TRPVVTRFAPSPTGFLHIGGGRTALFNWLYAR-------------------KHGGTMLLR 42

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +Q       D        + +   G  +     +       E+ L   K Y   A
Sbjct: 43  IEDTDRQRSTQEAIDAILDGLKWLGIDWDGATVYQFARAARHREVAEQLLAAGKAYRCYA 102

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +         +    + +  +   DPS     +    R       +  P   +T  
Sbjct: 103 TAEELTAMRDKARAEGRAKLYDGSWRDRDPSEAPAGVKPTIR-------LKAPLTGETVI 155

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  +       +     D  LL+ DG+ TY    LA     ++ G  ++I   G DH
Sbjct: 156 EDQVQGRVAWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R + +  A+  +   + V+    +    DG   K+SKR G           +G D
Sbjct: 207 LINAARQKQIYDAMEWE---LPVMAHIPLIHGPDG--SKLSKRHG----------ALGVD 251

Query: 421 SVRFM 425
           + R M
Sbjct: 252 AYRAM 256


>gi|111018328|ref|YP_701300.1| valyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817858|gb|ABG93142.1| valine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 902

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 78/269 (28%), Gaps = 43/269 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    V    +  +        +I     N TG +H+GH     + D L+  
Sbjct: 21  DPSSVEDDLYQGWVDAGYFRADPHSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALSRR 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 81  KRMQGYEVL-------WLPGMDHAGIATQTVVEKQLAVD--------------------- 112

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ +    D          G    +
Sbjct: 113 ----GKTKEDFGRELFIEKVWDWKRESG-GTIGGQMRRIGDSVDWSRDRFTMDDGLSRAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   +   G +Y        S   Q           D++ + +  R   + DD    +
Sbjct: 168 QTIFKRMYDDGLIYRAERLVNWSPVLQTAISDIEVKFEDVEGELVSLRYGSLNDDEPHVV 227

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +    T    D A      +  + ++I
Sbjct: 228 VATTRVET-MLGDTAVAVHPDDERYKHLI 255


>gi|119944173|ref|YP_941853.1| valyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119862777|gb|ABM02254.1| valyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 952

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 56/214 (26%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS + +           +  +         I     N TG +H+GH     + DTL   
Sbjct: 6   NPSAIEQKNYQNWEEKGYFKPHGDTSKESYCIMIPPPNVTGSLHMGHAFQDTIMDTLVRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  QRMQGKNTLWQMGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +          E ++  + D+  ++  K I   ++ L    D          G    +
Sbjct: 95  FAETGQTRKELGRETFIEKIWDWKAESGSK-ISQQMRRLGTSVDWDRERFTMDDGLSEAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           + +  +L     +Y G               D +
Sbjct: 154 KKVFVDLYNDNLIYRGKRLVNWDPKLHTAISDLE 187


>gi|94987979|ref|YP_596080.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991861|ref|YP_599960.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94541487|gb|ABF31536.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545369|gb|ABF35416.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Streptococcus pyogenes MGAS2096]
          Length = 666

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 110/333 (33%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DDRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G DS+R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDSLRYYLMR 338


>gi|15674551|ref|NP_268725.1| methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|13621657|gb|AAK33446.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 666

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 110/333 (33%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y + 
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-RQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|325971491|ref|YP_004247682.1| valyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026729|gb|ADY13488.1| Valyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 882

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 78/268 (29%), Gaps = 46/268 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S+  +I  + +  G    + + G+ +   +     N TG +H+GH     + D L    
Sbjct: 13  KSFEDRIYQTWMEKG--MFKPVAGEQSPFTVVMPPPNVTGILHMGHALNNSLQDILTRYY 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +G                           +  L+   +D        +  + + KE  
Sbjct: 71  RMTG---------------------------RPTLWVPGTDHAGIATQNIVERQLAKEGL 103

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +       F E  W    K +       II+  L+ +    D          G    +R
Sbjct: 104 RRQDLGRDRFIERTWQVKEKHHG------IIKQQLQKIGSSCDWDHERFTMDEGLSQAVR 157

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS---- 330
           +    L  +G +Y+G               D +      +    DV  P   SDGS    
Sbjct: 158 ESFVTLYERGLIYKGEYLVNYCPKCGTALADDEVEYQPVSAFLYDVRYP--YSDGSGFIT 215

Query: 331 -----YTYFAADLAYFKCKYERGFDNMI 353
                      D+A      +  + ++I
Sbjct: 216 VATTRPETMFGDVAVAVNPEDERYTHLI 243


>gi|163802404|ref|ZP_02196297.1| isoleucyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173705|gb|EDP58520.1| isoleucyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 381

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 16/166 (9%)

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
             H G+ +     + A+ ++     VL    V    DG   KMSK  G+ +  + V +++
Sbjct: 2   DQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVV---DGHGRKMSKSVGNVVAPKDVTNKL 58

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G+D +R  +     +  +     ++ ++S +        AY R R+  R       +L+ 
Sbjct: 59  GADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FFLANLNG 106

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
                +++P E         +   LA    ++  A      + +  
Sbjct: 107 FNPETDMVPAEEMVALDRWAVGRALAAQEEIV-KAYEEYNTHGVTQ 151


>gi|154684557|ref|YP_001419718.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350408|gb|ABS72487.1| MetS [Bacillus amyloliquefaciens FZB42]
          Length = 663

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 110/350 (31%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V GD +A      G++V      ++ G +I   A             
Sbjct: 17  PSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEE----------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 E   P  Y+     E+   +    L+   + ++   +    + + K+ +  L  
Sbjct: 66  ------ENITPQAYVDRAVAEIQKLWKQ--LDISHDDFIRTTESRHKEIIEKVFQKLLDN 117

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +I  D +                ++D     +G V   +             +  +   
Sbjct: 118 GDIYLDEYEGWYSIPDETFYTETQLVDVERNEKGEV---VGGKSPDSGHPVELIKEESYF 174

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG----- 348
           FR +      DR L   + + ++                    DLA  +  ++ G     
Sbjct: 175 FRMSKY---ADRLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPG 231

Query: 349 -FDNMIYVM-------------GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +++YV               +++   Y K   A    V ++  + + +   ++ +  
Sbjct: 232 NPKHVVYVWIDALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMAL 291

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +++  G D +R+ +L  
Sbjct: 292 DLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLRE 341


>gi|67458805|ref|YP_246429.1| glutamyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536746|sp|Q4UME8|SYE2_RICFE RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|67004338|gb|AAY61264.1| Glutamyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 463

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 93/288 (32%), Gaps = 46/288 (15%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I   + +PTG +H+G  R A+     A                           L 
Sbjct: 1   MTNVITRFAPSPTGFLHIGSARTALFNYLFAR-------------------HHNGKFLLR 41

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYS 237
           +    ++          E  + G+    +  +    + S+  N  +E  L ++   K Y 
Sbjct: 42  IEDTDKERSTKEAV---EAIFSGLKWLGLDWDGEVIFQSKRNNLYKEAALRLLQEGKAYY 98

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                + I    +        FI   ++   D S     I  + R        L  P+  
Sbjct: 99  CFTSQEEIERQRQKALENKQHFIFNSEWRDKDSSTYPTDIKPVIR--------LKVPREG 150

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           +    D  +  ++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G
Sbjct: 151 SITIHDTLQGDVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--G 202

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            DH     R  A+  A   +   +       + L       K+SKR G
Sbjct: 203 DDHLTNAARQIAIYHAFGYEVPSMTH-----IPLIHGADGAKLSKRHG 245


>gi|322807474|emb|CBZ05048.1| valyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 881

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWKEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|310766276|gb|ADP11226.1| valyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQPLYEHWEQKGYFKPHGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|297616267|ref|YP_003701426.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144104|gb|ADI00861.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 646

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 103/349 (29%), Gaps = 60/349 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A      GY+V      ++ G +I         R  +    
Sbjct: 16  PSDNLHIGHAYTTVAADCIARYKRMQGYDVFFLTGSDEHGQKIE--------RTARDKGM 67

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                 +    G  +      ++            EK +  +    V     I +   + 
Sbjct: 68  EPKAYVDRIVDGFKVLWDTLLISHNDFIRTTEERHEKAVQTIFQ-KVYEKGDIYKAKYEG 126

Query: 252 LNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 + F +E     G        ++    + Y +                    + L
Sbjct: 127 WYCTPCEAFWTERQLVDGKCPDCDRPVELTQEESYFF--------------AMSKYAERL 172

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF---AADLAYFKCKYERGF------DNMIYVM-GS-- 358
            +      D  +P  + +    +      DL   +  +E G        ++IYV   +  
Sbjct: 173 LKHIEENPDFIQPESRRNEMINFIKSGLEDLCVSRTTFEWGIPIPFAPGHVIYVWFDALV 232

Query: 359 ----------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG------------- 395
                     D   + K   A    V +   + + ++   + +  D              
Sbjct: 233 NYLTAVGYPDDQEKFGKYWPADVHLVGKDIVRFHTVIWPTILMAADLPLPKQVFGHGWLM 292

Query: 396 -MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
               KMSK  G+ +    +V++ G DS+R+ +L   N  +  +   ++ 
Sbjct: 293 LEGGKMSKSKGNVVDPLILVEKYGVDSIRYYLLKELNYGMDGYYSEEML 341


>gi|294625214|ref|ZP_06703855.1| valyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600488|gb|EFF44584.1| valyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 944

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGQTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|159899490|ref|YP_001545737.1| isoleucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892529|gb|ABX05609.1| isoleucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1061

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 15/165 (9%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L AV+  + ++ A  NV+    +    DG   KMSK  G+ ++   +V++ 
Sbjct: 571 DQTRGWFYTLHAVSTLLFDRPAYKNVICLGHL---LDGKGEKMSKSKGNIVSPWEMVEKY 627

Query: 418 GSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQAK 469
           G+D+VR +M    +      F    V E  ++          F+  YA     +      
Sbjct: 628 GADAVRWYMFAAGQPYNPRRFSADLVSESLRQFLLTLWNTYSFFTTYANVDGWTPELAQG 687

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQL---IVHLAEYPRVIEN 511
           D+     + L   N + ++   D S   +      L ++   + N
Sbjct: 688 DLAAIDRWALARLNALVRDVRNDLSNYDMNTPAKRLEQFVDELSN 732


>gi|21244284|ref|NP_643866.1| valyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|81799335|sp|Q8PGQ7|SYV_XANAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21109932|gb|AAM38402.1| valyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 944

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGQTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|332358809|gb|EGJ36632.1| methionine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 665

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 109/349 (31%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  QA   
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQAKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|319440905|ref|ZP_07990061.1| valyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 952

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +        +I     N TG +H+GH     + D++A  
Sbjct: 45  NPTDVESALYQGWVDAGYFHADATSDRKPFSIVLPPPNVTGQLHMGHALDHTLMDSMARR 104

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV      + AG    T                                V   L
Sbjct: 105 KRMQGYEVLWLPGSDHAGIATQT-------------------------------KVEAML 133

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +    +  ++  E+++  V ++  +    +I++ ++A+    D          G    +
Sbjct: 134 KETEGKDRFDYGREEFVERVWEWKHK-FGGVIQNQMRAIGDSVDWERERFTLDDGLSKAV 192

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + I   L  +G +Y        S   +    D
Sbjct: 193 QTIFKELFDRGLIYRAKRLVNWSPVLRTAISD 224



 Score = 38.4 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 71/206 (34%), Gaps = 31/206 (15%)

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +V L  LV   RD    KMSK  G+ I     V + G+D++RF +    N    D    +
Sbjct: 568 DVFLHGLV---RDEHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPG-TDLPIGE 623

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV- 500
              QS  N  F  +   A   ++   A+ +  +   +   R  +     +   +L+ +  
Sbjct: 624 DSAQSSRN--FATKLFNATKFALMNGAEVLGENEKQNFPAREELTDADRWILDKLEELRV 681

Query: 501 ----HLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKL 555
               HL  Y   + N             LY  A + F   +    +    R   A     
Sbjct: 682 LVDTHLDRYEFAVANEA-----------LYRFAWNEFCDWYLEIAKVQIPRDWDAATDAE 730

Query: 556 T----MMRLQLVHAVASIINSGLNII 577
                  RL L      ++++ L ++
Sbjct: 731 KTRGQNTRLVL----GRVLDTVLRLL 752


>gi|298485814|ref|ZP_07003892.1| Valyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159638|gb|EFI00681.1| Valyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGISRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|253686789|ref|YP_003015979.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753367|gb|ACT11443.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +        +I     N TG +H+GH     + DTL   
Sbjct: 6   NPQDIEQPLYEHWEKQGYFKPHGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  E ++  +  +  ++   I R  ++ L    D          G  + +
Sbjct: 95  AAEEGKTRHDYGREAFIDKIWQWKGESGGNITRQ-MRRLGNSVDWERERFTMDEGLSNAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          +    D +
Sbjct: 154 KEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|229493187|ref|ZP_04386979.1| valyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229319918|gb|EEN85747.1| valyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 894

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 78/268 (29%), Gaps = 41/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    V    +  +        +I     N TG +H+GH     + D L+  
Sbjct: 22  DPSAVEADLYQGWVDAGYFQADATSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDVLSRR 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 82  KRMQGYEVL-------WLPGMDHAGIATQSVVEKQLAAD--------------------- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ +    D          G    +
Sbjct: 114 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGGQMRRIGDGVDWSRDRFTMDEGLSRAV 168

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           + +   +  +G +Y          +L    S    K +    +L+       DD +  ++
Sbjct: 169 QTVFKRMFDEGLIYRAERLVNWSPVLQTAISDIEVKFEDVEGELVSLRYGSLDDNEPHVI 228

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 229 VATTRVETMLGDTAVAVHPEDERYKHLI 256



 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 39/222 (17%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV   E++ A   +  AQ+      L  L RD    KMSK  G+ I     VD  G+D++
Sbjct: 510 YVSEDESITAGPGKSGAQMPFKDVFLHGLVRDQYGKKMSKSRGNGIDPLDWVDRFGADAL 569

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF +    N    D    +   QS  N                 +  +       +    
Sbjct: 570 RFTLARGANPGS-DLSVGEDSAQSSRN--------------FATKLFNATKFALMNGAAP 614

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIE----NATIAQEPYKLAFYLYDLASVFHGHWSH 538
             +P  SE   ++  ++  L      ++     A    E  K          +FH  W  
Sbjct: 615 APLPARSELTDADRWILDRL----DTVQAEADAAFDRYEFSKACE------GLFHFAWDE 664

Query: 539 GRE--NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN-II 577
             +      +   A +  +            +++ + L+ ++
Sbjct: 665 VCDWYLELAKVQFAADEAV-------AANTRAVLGNVLDALL 699


>gi|115502765|sp|Q2S1L8|SYE_SALRD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 488

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 29/279 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A              +  D   +I     +   RY+  
Sbjct: 12  APSPTGRLHIGGLRTALYNYLFAR------------KHDGDFVLRIEDTDQA---RYEPG 56

Query: 189 LYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             ++  + L             G + A    SE      E    +V+            +
Sbjct: 57  AEDDIREALAWTGLEHDEGPEQGGDYAPYRQSERSEHYHEYAQKLVEAGRAYYAFDTEEE 116

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +          S     R   +   + ++    +G  Y   L  P+ ++ Q  D  R 
Sbjct: 117 LEELREEHGAYDGSTRRQMRNSLTLSDEKVEQRIDEGDDYVIRLKVPRQESVQVEDEIRG 176

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            + F ++ +    D+ L+KSDG  TY    LA     +     ++I   G +      + 
Sbjct: 177 TVSFDTSEID---DQVLVKSDGMPTYH---LANIVDDHLMNISHVIR--GEEWLSSTPKH 228

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A+  +      L    + L  +G   K+SKR  +
Sbjct: 229 VLMYDALGWEPPAFAHL---PLILSPNGG--KLSKRDAN 262


>gi|71734223|ref|YP_273420.1| valyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|90101544|sp|Q48MF2|SYV_PSE14 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71554776|gb|AAZ33987.1| valyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 948

 Score = 45.7 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGISRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|330838032|ref|YP_004412612.1| glutamyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329745796|gb|AEB99152.1| glutamyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 99/292 (33%), Gaps = 37/292 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+ G   A                    +Q     L +    Q+ 
Sbjct: 10  APSPTGYMHIGNLRTALYGYLFAK-------------------SQGGDFILRIEDTDQER 50

Query: 189 LYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII-R 246
                 ++        ++      E    +   +    + +   I K+Y+ + +      
Sbjct: 51  FVEGAREVINESLAAAHIIADESPEKGGAFGPYV----QSERKAIYKEYAEKLVASGHAY 106

Query: 247 DDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
               +  +      SE    + R       + I+     G  Y      P + +T   D+
Sbjct: 107 RCFCSAKVHAHESESEKFGGYDRHCRDLAPEEIERRLAAGTPYVIRQKMPLTGSTTYRDL 166

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +   ++ +    D+ LLKSDG  TY   + A     +     ++I   G+++    
Sbjct: 167 ILGSITIENSEL---EDQILLKSDGMPTY---NFANVVDDHLMEITHVIR--GNEYITST 218

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +   +      +  +  + L  ++    DG   K+SKR G   +   ++DE
Sbjct: 219 PKHVLLYEFFGWQLPEF-IHLPPVMGKSEDGTVSKLSKRHG-AASFGQLLDE 268


>gi|325048883|dbj|BAJ79309.1| putative valyl-tRNA synthetase [Rhodococcus erythropolis]
          Length = 894

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 78/268 (29%), Gaps = 41/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    V    +  +        +I     N TG +H+GH     + D L+  
Sbjct: 22  DPSAVEADLYQGWVDAGYFQADATSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDVLSRR 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 82  KRMQGYEVL-------WLPGMDHAGIATQSVVEKQLAAD--------------------- 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ +    D          G    +
Sbjct: 114 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGGQMRRIGDGVDWSRDRFTMDEGLSRAV 168

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           + +   +  +G +Y          +L    S    K +    +L+       DD +  ++
Sbjct: 169 QTVFKRMFDEGLIYRAERLVNWSPVLQTAISDIEVKFEDVEGELVSLRYGSLDDNEPHVI 228

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 229 VATTRVETMLGDTAVAVHPEDERYKHLI 256



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 39/222 (17%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           YV   E++ A   +  AQ+      L  L RD    KMSK  G+ I     VD  G+D++
Sbjct: 510 YVSEDESITAGPGKSGAQMPFKDVFLHGLVRDQYGKKMSKSRGNGIDPLDWVDRFGADAL 569

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF +    N    D    +   QS  N                 +  +       +    
Sbjct: 570 RFTLARGANPGS-DLSVGEDSAQSSRN--------------FATKLFNATKFALMNGAAP 614

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIE----NATIAQEPYKLAFYLYDLASVFHGHWSH 538
             +P  SE   ++  ++  L      ++     A    E  K          +FH  W  
Sbjct: 615 APLPARSELTDADRWILDRL----DTVQAEADAAFDRYEFSKACE------GLFHFAWDE 664

Query: 539 GRE--NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN-II 577
             +      +   A +  +            +++ + L+ ++
Sbjct: 665 VCDWYLELAKVQFAADEAV-------AANTRAVLGNVLDALL 699


>gi|291519611|emb|CBK74832.1| glutamyl-tRNA synthetase, bacterial family [Butyrivibrio
           fibrisolvens 16/4]
          Length = 482

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 144/406 (35%), Gaps = 70/406 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E  +  A   ++ +  
Sbjct: 9   APSPTGRMHVGNLRTALYAYLVAKHEGGDFLLRI-----EDTDQERLVEGA---VDIIYR 60

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++           D D   G Y     +  G  L  +Y+ +L+   E  +     D  + 
Sbjct: 61  TLAATGLIHDEGPDKDKGVGPYVQSERQAAGIYL--EYAKQLIEKGE-AYYCFCNDERLA 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              ++I D    +  +H + +S            ++ ++     G  Y      P++ TT
Sbjct: 118 ECKQVIGDKEIHIYDKHCLNLS------------KEEVEANLAAGKPYVIRQNNPRTGTT 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D    ++   +  +    D  L+KSDG  TY   + A     +  G  ++  V G++
Sbjct: 166 TFVDELYGEITVDNAELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--V 417
           +     +   +  A   +  +          L  +    K+SKR+G   +   ++++  +
Sbjct: 218 YISSSPKYNRLYEAFGWEVPKYIHC-----PLITNEEHQKLSKRSGHS-SYEDLIEQGFL 271

Query: 418 GSDSVRFMMLWRKNSELLD--FDFCKVKEQSK-----ENPVFYVQYAYARCRSIFRQAKD 470
               V F+ L   + E  +  F   ++ ++       ++P  +          +     +
Sbjct: 272 TEAVVNFVALLGWSPENDNEIFSLEELVKEFDYHRISKSPAVF------DITKLKWMNGE 325

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
               +DFD F     P   E+   +  L   +A+        +P +
Sbjct: 326 YMKAMDFDKFYEMAEPYLKEYIKGDYDL-KKIAKMVQTRIEIFPDI 370


>gi|262045298|ref|ZP_06018323.1| valine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037354|gb|EEW38600.1| valine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 951

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDENQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|167816121|ref|ZP_02447801.1| valyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 955

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  ++    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKERSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDKMSEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 202


>gi|153940722|ref|YP_001392440.1| valyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152936618|gb|ABS42116.1| valine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320426|gb|ADG00804.1| valine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 881

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|103486745|ref|YP_616306.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976822|gb|ABF52973.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 103/331 (31%), Gaps = 48/331 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------- 178
           P G  H+GH   A+  D +A      G  V      ++ G ++   A             
Sbjct: 17  PNGRPHIGHAYEAIATDVMARFQRARGRNVRLVTGTDEHGLKMFQTARDQGRATIDLANE 76

Query: 179 LSVFWRYQQALYNNDSDL------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           +S ++R   A  N   D+      P  +     +    +   D Y      +   +    
Sbjct: 77  MSGYFREMYAKLNISYDMFMRTSDPAHHAASQAIWKAMEANGDLYLDRYEGWYSVRDEAF 136

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             +  +    + IR   +   ++    + E  F R   S  +D +  L R        + 
Sbjct: 137 YDESELTDGGEGIRLSPQGTPVE--WTVEESWFFRL--SNYQDRLLALYRDN---PDFIR 189

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN- 351
           P   +      ++        +    D   P+  S G   Y   D A        G+ + 
Sbjct: 190 PESRRNEVLRFVEGGLKDLSVSRTSFDWGVPVPGSPGHVMYVWVD-ALTTYLSGLGYPDP 248

Query: 352 ----------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPI 398
                      I+++G D    + R   V   A  +S        +      L R     
Sbjct: 249 ASDFGTFWPANIHMIGKD----IVRFHTVYWPAFLMSANLPLPRQVFGHGFLLNRG---E 301

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ +    + +  G D++R+ +L  
Sbjct: 302 KMSKSLGNVVDPMALAERFGVDALRYYLLRE 332


>gi|332362322|gb|EGJ40122.1| methionine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 679

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 108/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  QA   
Sbjct: 30  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQAKAE 77

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K    LLN   +K++    DY  + +  +    L  
Sbjct: 78  EAGISPQAYVDG-------MAVGVKELWNLLNISYDKFIRTTDDYHEKVVADVFERLLAQ 130

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 131 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 184

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 185 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 244

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 245 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 304

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 305 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 353


>gi|225629915|ref|YP_002726706.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782844|sp|C0R573|SYL_WOLWR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225591896|gb|ACN94915.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 838

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K +        ++  +   K  K  +  +   P+G +H+GH R   +GD +A      G+
Sbjct: 6   KNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGF 65

Query: 160 EV 161
           EV
Sbjct: 66  EV 67


>gi|94993594|ref|YP_601692.1| glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080147|sp|Q1J8L3|SYE_STRPF RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|94547102|gb|ABF37148.1| Glutamyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 481

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 94/284 (33%), Gaps = 25/284 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  + R     D    +            + 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYAR--RHGGTFIIRIE-DTDRKRHVED-GERSQLENLKW 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  +  + PE +    Y +     L  +Y  +LL           K Y  +  +   R+ 
Sbjct: 66  LGMDWDESPETH--ENYRQSERLALYQQYIDQLLAEG-----KAYKSYVTEEELAAERER 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   +   +I+E  F           I      G V    L   +S   +  DM +  
Sbjct: 119 QEAAG-ETPRYINE--FIGMSADEKAKYISEREAAGVVPTVRLAVNESGIYKWTDMVKGD 175

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F    +G   D  + K DG  TY   + A     ++    ++I   G DH     +  
Sbjct: 176 IEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GDDHIANTPKQL 228

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 229 MVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|68171729|ref|ZP_00545082.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88657921|ref|YP_507787.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|67998851|gb|EAM85550.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599378|gb|ABD44847.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 506

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 124/388 (31%), Gaps = 39/388 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D +A  M   G+ V      ++ G +I   A            N  +  
Sbjct: 18  HIGHVYTTLISDIIARFMRLDGHSVKFITGTDEHGQKIEKAAQERNMSLLDFTDNTSAVF 77

Query: 197 PE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMK 243
            +      Y    +++           +      +   + +        V+D +     +
Sbjct: 78  RQLADVMNYSYDDFIRTTETRHKKTVVALWQRLCDNGAIYLGSYSGWYSVRDETFYQEKE 137

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ------GYVYEGILPPPKSK 297
           ++  D KA       +I E  +     +    ++             Y Y  ++   KS 
Sbjct: 138 LV--DGKAPTGADVEWIEEPSYFFRLSNFQERLLAFYEENPDFVIPKYRYNEVISFVKS- 194

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-------- 349
             +   + R+ +L+   +  DD     +  D    Y    +  F  +  + +        
Sbjct: 195 GLKDLSVSRQNVLWGIKVPNDDKHVIYVWVDALANYLT--VLGFPDENHKDYQAYWASDS 252

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            +++ V+G D    + R  AV        A++ +    L   +      K+SK  G+ I 
Sbjct: 253 SSVLQVVGKD----ILRFHAVYWPAILMAAELPLPKKILAHGWWTNEGQKISKSLGNVIK 308

Query: 410 LRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467
              +V+E G D +R+ ++         DF    +      +    +     R  S+  + 
Sbjct: 309 PFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRNSLINCINYDLANNIGNLVQRTVSLLYKE 368

Query: 468 AKDIFPDLDFDLFP-RNVIPQESEFDTS 494
              I P +  +L     V+P   E    
Sbjct: 369 CGGIVPTVSGNLLQGEEVLPDYQEILEK 396


>gi|332198490|gb|EGJ12573.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 486

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 95/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFLIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGMDWDESPESH--ENYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++   +  +         I      G +    L   +S   
Sbjct: 113 AAERERQEVAGETPRYINEYLGMSEEEK------AAYIAEREAAGTIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 KWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|187929796|ref|YP_001900283.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|254782429|sp|B2UAQ4|SYI_RALPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187726686|gb|ACD27851.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 959

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTYFAADLAYFK 342
           L    ++  +K  ++  Q L    ++GD+ D      D        G+  +     ++  
Sbjct: 513 LLEQVAQRIEKSGIEAWQTLDPRELLGDEADMYEKNRDTLDVWFDSGTTHWHVIRGSHAA 572

Query: 343 CKYERGFD----NM--IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             Y+   D     +  +Y+ GSD   G+       A+ +  K     +L         DG
Sbjct: 573 DLYDASADLPDGRLADLYLEGSDQHRGWFHSSLLTASMLYGKPPYKGLLTHGF---TVDG 629

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ I  + + +++G++ +R  +     S  L      +K   +        
Sbjct: 630 EGRKMSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISDEILKRVVEG------- 682

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             Y R R+  R       D D          Q  E D   + L
Sbjct: 683 --YRRIRNTLRFLLANLTDYDHAKHALPT-EQWLEIDRYAVAL 722


>gi|58581127|ref|YP_200143.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623051|ref|YP_450423.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575635|ref|YP_001912564.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|67461613|sp|Q5H2R3|SYE_XANOR RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|118595571|sp|Q2P5M8|SYE_XANOM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|238689550|sp|B2SSC6|SYE_XANOP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|58425721|gb|AAW74758.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84366991|dbj|BAE68149.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520087|gb|ACD58032.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 467

 Score = 45.7 bits (107), Expect = 0.025,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 92/288 (31%), Gaps = 47/288 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ-INTLALSVFWRYQQ 187
           + +PTG +H+G  R A+     A      G  V R   I D   Q     A+       Q
Sbjct: 8   APSPTGYLHIGGARTALYCWLEAR--RRGGQFVLR---IEDTDRQRSTQAAIDAILEAMQ 62

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L     + P      V       E           +   + L  +++ ++    K    
Sbjct: 63  WLGLGYDEGPIYQTQRVARYQEVAEQLLAQGKAYYAYETREELDAMREAAMAKQEK---- 118

Query: 248 DLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                  ++D    E +  +R DP+ +                    P   T    D+ +
Sbjct: 119 ------PRYDGAAREQNLPYRDDPNRV---------------IRFKNPIGGTVVFDDLIK 157

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            ++   ++ +    D  + + DG  TY   + A     ++ G   +I   G DH     R
Sbjct: 158 GRIEIANSELD---DMVIFRPDGLPTY---NFAVVVDDWDMGITEVIR--GDDHINNTPR 209

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
              + AA+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 210 QINIYAALGAPVPKFAHM-----PMILDEQGTKLSKRTGAADVMQYKD 252


>gi|78357690|ref|YP_389139.1| glutamyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|115305766|sp|Q30Y02|SYE_DESDG RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78220095|gb|ABB39444.1| glutamyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 464

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 98/283 (34%), Gaps = 43/283 (15%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R AV    LA    F G  V R           +T      
Sbjct: 3   KVVTRFAPSPTGHLHLGGARTAVFSWLLAR--HFGGEFVLRIE---------DTDMERSK 51

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
             Y  ++  + + L   +      +    +L ++Y   LL   +  W        V+AM 
Sbjct: 52  QEYTDSILASMAWLGLDWDGEPVYQSRRFDLYNEYIDRLLAEGKAYWCE-CSPEEVEAMR 110

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R   + L  +++    E     G+   +R                L  P +  T   
Sbjct: 111 ETARA--RGLKPKYNGRCRERGLQGGEGRVVR----------------LKAPLTGKTVFT 152

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ +  + F ++ +    D  + ++DGS TY   +LA        G  +++   G DH  
Sbjct: 153 DLVKGTIAFDNSELD---DMIIRRADGSPTY---NLAVVVDDATMGVTHVLR--GDDHVN 204

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              +   +  A+     +        V +       K+SKR G
Sbjct: 205 NTPKQILLYEALGLPVPEFGH-----VPMILGPDRQKLSKRHG 242


>gi|13542075|ref|NP_111763.1| cysteinyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|21264017|sp|Q978Z5|SYC_THEVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 454

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 61/425 (14%), Positives = 136/425 (32%), Gaps = 79/425 (18%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 +VN+           H+GH R  +  D +A  +   GY V     I D   +I 
Sbjct: 15  NEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKLEGYSVFYLQNITDIDDKII 74

Query: 176 TLALSVFWRYQQALYNNDSDLPEG------------YYPGVYLKHVGKELADKYSSELLN 223
             A  +     +      S+  E                 +Y+  +  +++         
Sbjct: 75  NRAKEMGIEPSEVAKIYFSEFQEDMKRLKVDSVNFFARATLYIDEIVSQISRMMEKGYAY 134

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             ++     V+ +  +   ++    L  +   + + ++E+  +  D          L ++
Sbjct: 135 ETDDGVYFEVRKF--KDYGELSNQSLDQIIAGYRVAVNENKRNPEDF--------VLWKK 184

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
               E   P P  +      ++   +    T  GD+ D     SD  + +  A++A  + 
Sbjct: 185 KKAGEPSWPSPWGEGRPGWHIEDTAIT--ETYFGDEYDIHGGGSDLIFPHHEAEIAQMRS 242

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
                      + G     Y+         ++  K                    KMSK 
Sbjct: 243 -----------ISGKR---YLAHYWIHTGMININK-------------------EKMSKS 269

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
             +FIT+R ++ +   + +RF +L       ++F    ++E  K      + Y       
Sbjct: 270 LKNFITIRDILKDYRPEDLRFAILNANYRTQIEFSKELMEESKK-----LIDY----IND 320

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQ-----ESEFDTSELQLIVHLA-------EYPRVIEN 511
            +R+ + +    +F +   +VI +     E++FD   + ++  LA        +  + + 
Sbjct: 321 TYRKLEYVNGSGNFKIDVNSVISEMRSLAENDFDFHSV-IVKLLAITGEINRNFEGINKE 379

Query: 512 ATIAQ 516
                
Sbjct: 380 VAEEL 384


>gi|148544425|ref|YP_001271795.1| glutamyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153789|ref|YP_001842130.1| glutamyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363147|ref|ZP_03847282.1| glutamyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682747|ref|ZP_08162263.1| glutamate--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980002|sp|A5VKT4|SYE_LACRD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|229560001|sp|B2G868|SYE_LACRJ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|148531459|gb|ABQ83458.1| glutamyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225133|dbj|BAG25650.1| glutamyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071865|gb|EEI10153.1| glutamyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977097|gb|EGC14048.1| glutamate--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 501

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 105/299 (35%), Gaps = 42/299 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
            KV + + + +PTG +H+G+ + A+     A       ++     +  R     +A  + 
Sbjct: 3   QKVRVRY-APSPTGFLHIGNAQSALFNYLFARHFDGTMVLRIEDTDTKRNVEDGEASQRE 61

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
           N   L + W       N  +     Y      K     +  KY  ELL+          K
Sbjct: 62  NLHWLGIDW---DEGPNKPNPKYAPYRQSERNKEG---IYHKYIQELLDKGI-----AYK 110

Query: 235 DYSVQAMMKIIRDDLKALNI--QHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           DYS +  +  +R+  KA N    +D  +  + +  +               +G       
Sbjct: 111 DYSTEEELAEMRERQKANNEPPHYDGRWYGKSEEEQKAA----------EAKGLKPTIRF 160

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             PK    +  D+ R  + F S  +G D    + KSDG  TY   + A     +     +
Sbjct: 161 HFPKDHDYEWDDIARGHVSFNSDNLGGDF--IIEKSDGMPTY---NFAVVVDDHTMDITH 215

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++   G+DH     +  A+  A+  +      +      ++      K+SKR  D +  
Sbjct: 216 VLR--GADHISNTPKQIAIYEALGWEHPTFCHIPL----IFNPKTRKKLSKRDKDTLQF 268


>gi|167551269|ref|ZP_02345024.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205323943|gb|EDZ11782.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|327191807|gb|EGE58807.1| valyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 947

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ADAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-- 448
           L RD    KMSK  G+ I    ++DE G+D++R             F    +  Q ++  
Sbjct: 583 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIMAAQGRDVK 629

Query: 449 -NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +P     Y   R           F +++      + +P+ +E   +   ++  LA   R
Sbjct: 630 LDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTELARTER 685

Query: 508 VIENATIAQ 516
            +  A  A 
Sbjct: 686 DVTEALEAF 694


>gi|226950593|ref|YP_002805684.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841749|gb|ACO84415.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 881

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|222475258|ref|YP_002563674.1| glutamyl-tRNA synthetase (gltX2) [Anaplasma marginale str. Florida]
 gi|222419395|gb|ACM49418.1| glutamyl-tRNA synthetase (gltX2) [Anaplasma marginale str. Florida]
          Length = 527

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 93/312 (29%), Gaps = 60/312 (19%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +   + G      I   + +PTG +H+G  R A+     A                   G
Sbjct: 52  HPAWVCGAEIVRVITRFAPSPTGSLHLGGARTALFNWLFARR----------------HG 95

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q          R +       S+          ++ +           ++     +   
Sbjct: 96  GQF-------LLRMEDTDQERSSETVAQSI----IEDMAWLGLHHDQDVVIQSARRERHT 144

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF------HRGDPSPIRDIIDNLARQGY 285
            V             ++L A    +  + SEDD       H  +    R    +     +
Sbjct: 145 QVA------------EELLARGKAYYCYCSEDDIAAEKLRHENEGKHYRHHCPS-RDANH 191

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKC 343
              G     + K+ +  ++     ++    V  +   D  +L+S+G  TY    LA    
Sbjct: 192 AQSGTAGVLRLKSPENREIKFTDGVYGEISVSSEQIDDMVILRSNGHPTYL---LAVVVD 248

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK- 402
            ++    ++I   GSDH     +   +A A+     Q        + L  D    K+SK 
Sbjct: 249 DHDMCITHIIR--GSDHITNTIKQMLLAEAMGWDNPQFCH-----IPLIHDEGGAKLSKR 301

Query: 403 -RAGDFITLRHV 413
            RA      R +
Sbjct: 302 NRAPGVHEYREL 313


>gi|148381112|ref|YP_001255653.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153934142|ref|YP_001385486.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935830|ref|YP_001388892.1| valyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290596|emb|CAL84725.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152930186|gb|ABS35686.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931744|gb|ABS37243.1| valine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 881

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDENKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRNKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|158521204|ref|YP_001529074.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510030|gb|ABW66997.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 929

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 67/202 (33%), Gaps = 27/202 (13%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  + + + G+   +Y+ GSD   G+       A     +    +VL    V    DG  
Sbjct: 545 AVLEQRQDLGWPADLYLEGSDQHRGWFHSSLLTAVGTRGRAPYKSVLTHGFVV---DGNG 601

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    ++ + G++ +R  +      E +      V + S         Y 
Sbjct: 602 KKMSKSMGNVIAPDAIIKKYGAEILRLWVAASDYREDIRISDPIVNQLSDA-------YK 654

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             R  S F  A       + D    + +P+   F       ++        +  A    E
Sbjct: 655 KVRNTSRFMLANLYDFSPEKDAVDYSDLPELDRFA------LLCFGRLAEKLRTAYDTYE 708

Query: 518 PYKLAFYLYDLASVFHGHWSHG 539
            + +          +H  +++ 
Sbjct: 709 FHVV----------YHRLYNYC 720


>gi|110638824|ref|YP_679033.1| valyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281505|gb|ABG59691.1| valyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 880

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 51/206 (24%), Gaps = 33/206 (16%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             S  +    +            I     N TG +H+GH     + D L       G E 
Sbjct: 17  WYSYWLENKFFHSAPHVNKKPFTIVIPPPNVTGVLHMGHMLNNTIQDVLIRKARMEGKES 76

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                 + A   I T A  V    +Q +  +D                     DKY    
Sbjct: 77  CWVPGTDHA--SIATEAKVVALLREQGIKKSD-------LSRDKFLEHAWAWKDKYG--- 124

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                                 II + LK L    D   +           + ++ + L 
Sbjct: 125 ---------------------GIILEQLKKLGASCDWDRTRFTMEDNLSDAVIEVFNKLY 163

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRK 307
             G +Y G          +    D +
Sbjct: 164 ADGMIYRGFRMVNWDPEGKTALSDEE 189


>gi|15926207|ref|NP_373740.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266989|ref|YP_001245932.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393036|ref|YP_001315711.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978858|ref|YP_001441117.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315639|ref|ZP_04838852.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005323|ref|ZP_05143924.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|269202152|ref|YP_003281421.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|295406906|ref|ZP_06816709.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275775|ref|ZP_06858282.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246270|ref|ZP_06930119.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|21264022|sp|Q99W73|SYC_STAAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56749452|sp|Q932G0|SYC_STAAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171769940|sp|A7WYU7|SYC_STAA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082076|sp|A6TZ06|SYC_STAA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082077|sp|A5IQ83|SYC_STAA9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13700420|dbj|BAB41718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|46395518|dbj|BAB56692.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740058|gb|ABQ48356.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945488|gb|ABR51424.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720993|dbj|BAF77410.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|262074442|gb|ACY10415.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|285816229|gb|ADC36716.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968137|gb|EFG44163.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176868|gb|EFH36126.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829025|emb|CBX33867.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128822|gb|EFT84821.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727911|gb|EGG64360.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 466

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  KV +          +H+G+ R A+  D +     + GY V    Y+++     +
Sbjct: 16  KPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYNVE---YVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L      +  Q L  +  ++ E Y    +       +    S+  +    +  +  +KD
Sbjct: 73  KLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKATSNPRVMDHMDDIIQFIKD 127

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              Q           A     D++     F  G        ID+L          +    
Sbjct: 128 LVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQSIDDLK---------VGARI 168

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                K D     L  ++       + P  +    +    + +A+     E G    I+ 
Sbjct: 169 DAGEHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFH----ELGPTIDIHA 224

Query: 356 MGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            GSD    +      +A + +   A        +   + +    KMSK  G+FI +  ++
Sbjct: 225 GGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINIDNEKMSKSLGNFILVHDII 280

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            EV  D +RF M+       ++++   V+     
Sbjct: 281 KEVDPDVLRFFMISVHYRSPINYNLELVESARSG 314


>gi|204926949|ref|ZP_03218151.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323614|gb|EDZ08809.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQNIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|157964769|ref|YP_001499593.1| glutamyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|229470597|sp|A8F2B0|SYE2_RICM5 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|157844545|gb|ABV85046.1| Glutamyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 513

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 40/285 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T   I   + +P+G +H+G  R A+     A              + N          L 
Sbjct: 2   TNNVITRFAPSPSGFLHIGSARTALFNYLFAR-------------HHN------GKFLLR 42

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++       +        + L   G+ +     + L      K L   K Y    
Sbjct: 43  IEDTDKERSTKEAVETIFSGLKWLGLDWNGEVIFQSKRNNLYKEAALKLLQNGKAYYCFT 102

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + I    +        FI   ++   DPS     I  + R        L  P+  +  
Sbjct: 103 SQEEIERQRQQALENKQHFIFNSEWRDKDPSIYPTDIKPVIR--------LKTPREGSIT 154

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G DH
Sbjct: 155 IHDTLQGEVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R  A+  A   +   +       + L       K+SKR G
Sbjct: 207 LTNAARQLAIYQAFGYEVPSMTH-----IPLIHGADGAKLSKRHG 246


>gi|91784464|ref|YP_559670.1| valyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|91688418|gb|ABE31618.1| valyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 959

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 68/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + +      E          +   +F       N TG +H+GH     + 
Sbjct: 11  TLAKSFEPQTIEAHWGPEWEKRAYATPVIQENRKDFSIQLPPPNVTGTLHMGHAFNQTIM 70

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 71  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I + ++ L    D          
Sbjct: 99  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITNQVRRLGASIDWSREYFTMDD 157

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G         L    S      + +   L 
Sbjct: 158 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPALLTAVSDLEVVSEEENGSLW 208


>gi|307106783|gb|EFN55028.1| hypothetical protein CHLNCDRAFT_134869 [Chlorella variabilis]
          Length = 394

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 96/284 (33%), Gaps = 30/284 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G ++       DA         +V    +  
Sbjct: 49  APSPTGYLHVGGARTALFNWLFA---KNVGGKLILRVEDTDAARSTRESEEAVLTDLKWL 105

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +   KEL  +Y  +L+      +     D  ++AM K   + 
Sbjct: 106 GIHWDEGPDVGGPHGPYRQSERKELYKQYVDQLVEAG-VAYPCFCTDEELEAMKKDAEE- 163

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K L   +              S  ++ +D +  +G  +      PK +  +  D+ R +
Sbjct: 164 -KKLPPIYRG---------KWASASKEEVDGMLARGVPHCYRFRVPKGEVVRIQDVIRGE 213

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           + + +  +GD     LL+S+G   Y F   +     +      ++I     +H     R 
Sbjct: 214 VSWSTDTLGDF---VLLRSNGLPVYNFCVAIDDALMRIS----HVIR--AEEHLPNTLRQ 264

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
             +  A+              V L       K+SKR G      
Sbjct: 265 VLIYQALGFPTPTFGH-----VSLILAPDKSKLSKRHGATSVGE 303


>gi|294495735|ref|YP_003542228.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666734|gb|ADE36583.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 471

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 104/377 (27%), Gaps = 98/377 (25%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  ++ D L  ++ + GY V     I D                           
Sbjct: 37  HIGNYRTFLMTDNLVRILEYLGYTVNLVMNITD--------------------------- 69

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +       + K    L  F E+                     L  LNIQ 
Sbjct: 70  ---------IDDKTIRDSKKAGMSLKEFTEKYTEEFFCG-------------LDMLNIQR 107

Query: 257 DIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
                   + R   +   + ++   L  +G  YE                   +L F S 
Sbjct: 108 A-----SSYPRATENVDGMIELAQTLMEKGLAYEKDGSVYYRIAAFPEYGKLSKLDFNSI 162

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-----------------VMG 357
            VG  VD      D        D    K   +   +  IY                 VM 
Sbjct: 163 KVGASVDVDEYDKD-----NPRDFVLLKASTQEEIERGIYYESPWGKIRPGWHTECSVMS 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCE------LVRLYRDGMP-----IKMSKRAGD 406
            +H G    +      +     +  +   E       VR +  G        KMSK  G+
Sbjct: 218 MNHFGPSLDIHTGGVDLIFPHHENEIAQSEGATGKPFVRYWIHGEHLIVDGEKMSKSKGN 277

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
             TL  +V++ G + VRFM +     + LDF     +           Q +Y + R    
Sbjct: 278 VFTLPELVEKYGGEVVRFMFMSVHYRKKLDFSDSFAQNA---------QNSYFKLRETLE 328

Query: 467 QAKDIFPDLDFDLFPRN 483
             +      D + +P +
Sbjct: 329 NLQFAIKGADDNEYPSD 345


>gi|257462510|ref|ZP_05626922.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060166|ref|ZP_07924651.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685842|gb|EFS22677.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 852

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
               +K         +  G N++       +  +   P+G +HVGH R   +GD +A   
Sbjct: 7   KEVEQKWQEKWEKDQVFKGSNVVEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYK 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMKGYNV 73


>gi|171779006|ref|ZP_02920014.1| hypothetical protein STRINF_00889 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282364|gb|EDT47789.1| hypothetical protein STRINF_00889 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 485

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 100/302 (33%), Gaps = 44/302 (14%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D 
Sbjct: 2   PKKIRVRY-APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVED- 54

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                           + L  +  + P+ +    Y +    ++  KY  +LL   E K  
Sbjct: 55  -------GERSQLENLKWLGMDWDESPQTH--EKYRQSERLDIYQKYIDQLL--AEGKAY 103

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                    A  +  ++         + F+   +  +         I     +G +    
Sbjct: 104 KSYVTEEELAAERERQEAAGETPRYINEFLGMSEEEK------AAYIAEREAKGIIPTVR 157

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L   +S   +  D+ +  + F    VG   D  + K DG  TY   + A     +     
Sbjct: 158 LAVNESGIYKWHDIVKGDIEFEGGNVG--GDWVIQKKDGYPTY---NFAVVIDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++I   G DH     +   V  A+  +  +       +  +       K+SKR  + +  
Sbjct: 213 HVIR--GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQF 266

Query: 411 RH 412
             
Sbjct: 267 IE 268


>gi|171464053|ref|YP_001798166.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193591|gb|ACB44552.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 953

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 14/153 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+        A +  K     +L         DG   KMSK  G+ I  +
Sbjct: 583 LYLEGSDQHRGWFHSSLLTGAMLDGKPPYKALLTHGF---TVDGQGRKMSKSVGNVIAPQ 639

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V D++G++ +R  +     S  +      +K  ++         +Y R R+  R     
Sbjct: 640 QVADKLGAEIIRLWVASTDYSGEMTISDEILKRVTE---------SYRRIRNTLRFLLAN 690

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             D D          Q  E D     L   L +
Sbjct: 691 LSDFDPSKHSIPA-DQWLEIDRYAAALANTLQK 722


>gi|51245648|ref|YP_065532.1| valyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826816|sp|Q6AMA0|SYV_DESPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50876685|emb|CAG36525.1| probable valyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 887

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 55/209 (26%), Gaps = 34/209 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K LS          +   GK     +     N TG +HVGH     + D L       G
Sbjct: 18  EKWLSRWHKQNAFATKMEDGKDAFSIV-IPPPNVTGVLHVGHALNNTLQDILVRYHRMCG 76

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                    + AG                                V  + +  E      
Sbjct: 77  DNTMWIPGTDHAGI---------------------------ATQNVVERQLATE-----G 104

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E ++  V  +        I + LK +    D          G  + +R++  
Sbjct: 105 KGRHDLGREAFIERVWKWREDKG-GTIVNQLKKIGSSCDWERERFTMDEGLSTSVREVFV 163

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L ++G +Y+G          Q    D +
Sbjct: 164 RLYKEGLIYKGDYIVNWCPRCQTALADDE 192


>gi|327470507|gb|EGF15963.1| methionine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 665

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 109/349 (31%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  QA   
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQAKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 922

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 62/321 (19%), Positives = 110/321 (34%), Gaps = 55/321 (17%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   +LL    E KW+P   +  +  M++  R D      +A  +   +F +E+     
Sbjct: 416 DKIRDQLLEAVAETKWVPAWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYAENGQEII 474

Query: 269 DPSPIR-----------DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               I            +I      +  + EG         T   +MD   + F S   G
Sbjct: 475 TDETIDHVSALFREHGSNIWFEKEAKDLLPEGFTHEGSPNGTFFKEMDIMDVWFDS---G 531

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 L + D        DL       +R  D  +Y+ GSD   G+       + AV+ 
Sbjct: 532 SSHQSVLEERD--------DL-------QRPAD--LYLEGSDQYRGWFNSSLTTSVAVTG 574

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     +L         DG   KMSK  G+ +    V++++G+D +R  +        + 
Sbjct: 575 KAPYKGILSHGF---ALDGEGRKMSKSLGNVVLPSKVMNQLGADILRLWVASVDYQSDV- 630

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                   +  +N +  V   Y + R+ FR       D D  +   +V     +    + 
Sbjct: 631 --------RVSDNILKQVAEVYRKIRNTFRFLLGNLADFDSTVNAVDV----KDLREVDR 678

Query: 497 QLIVHLAEYPRVIENATIAQE 517
            ++V L      ++ +    E
Sbjct: 679 YMMVKLNNLITKVKKSYEDYE 699


>gi|197303175|ref|ZP_03168217.1| hypothetical protein RUMLAC_01898 [Ruminococcus lactaris ATCC
           29176]
 gi|197297715|gb|EDY32273.1| hypothetical protein RUMLAC_01898 [Ruminococcus lactaris ATCC
           29176]
          Length = 485

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 133/390 (34%), Gaps = 54/390 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D    +   L +      + 
Sbjct: 10  APSPTGRMHVGNLRTALYAYLIA---KHEGGDFILRVEDTDQERFVEGALDIIYRTLAKT 66

Query: 188 ALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L +++    +  Y G Y++       L  KY+ +L+   +  +        ++++   +
Sbjct: 67  GLVHDEGPDKDAGY-GPYVQSERNAAGLYLKYAKQLVEQGD-AYYCFCDKERLESLKTTV 124

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    +++     +S            ++ ++     G  +   L  P   TT   D  
Sbjct: 125 SESGTEISVYDKHCLSLS----------KEEVEANLAAGKPWVIRLNVPNEGTTTFHDEI 174

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
              +   +  +    D  L+KSDG  TY  A++       +     + +V+ G+++    
Sbjct: 175 YGDITVPNAELD---DMILIKSDGYPTYNFANV------IDDHLMEITHVVRGNEYLSSA 225

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSV 422
            +   +  A   +     V +     L  D    K+SKR G   +   ++++  V    V
Sbjct: 226 PKYNRLYDAFGWE-----VPVYVHCPLITDENHKKLSKRCGHS-SYEDLIEQGFVSEAVV 279

Query: 423 RFMMLWR--KNSELLDFDFCKVKEQSKENPVFYVQYAYAR-------CRSIFRQAKDIFP 473
            ++ L     +     F   ++ E           Y +            +     +   
Sbjct: 280 NYVALLGWCPSDNREIFSLEELVEAFD--------YHHMNKSPAVFDVVKLKWMNGEYLK 331

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            +DFD F     P  SE  T +  L   +A
Sbjct: 332 AMDFDKFFELAKPYISETVTKDYDL-KKIA 360


>gi|163784056|ref|ZP_02179010.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880669|gb|EDP74219.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 193

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 33/210 (15%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +      +    +  N        ++     N TG +H+GH     + D         
Sbjct: 11  IEEKWYKQWLENNLFFANPENSEEPFSVVMPPPNVTGKLHIGHALNMTLQD--------- 61

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
                                  +  RY++    N   LP   + G+  + V     ++ 
Sbjct: 62  -----------------------ISVRYKRMKGFNTLWLPGFDHAGIATQWVVTRQLEEK 98

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                +   EK++  V ++   A    I+  ++ L    D          G    +R   
Sbjct: 99  GINRFDLGREKFIQKVWEWVPIA-RDAIKKQIERLGASCDWSKKRFTLDEGFARAVRYAF 157

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            NL + GY+++           +    D +
Sbjct: 158 SNLYKNGYIFKAPYIVNWDPKDRTAISDLE 187


>gi|156975871|ref|YP_001446778.1| valyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156527465|gb|ABU72551.1| hypothetical protein VIBHAR_03637 [Vibrio harveyi ATCC BAA-1116]
          Length = 952

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|153834562|ref|ZP_01987229.1| valyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|269963277|ref|ZP_06177609.1| Valyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|148869005|gb|EDL68050.1| valyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|269831992|gb|EEZ86119.1| Valyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 952

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|30248461|ref|NP_840531.1| valyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|75541052|sp|Q82X51|SYV_NITEU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30138347|emb|CAD84355.1| probable valyl-tRNA synthetase (valine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 918

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 55/217 (25%), Gaps = 37/217 (17%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P  +     S   +   +            I     N TG +H+GH     + D L  
Sbjct: 7   FDPKEIETRWYSTWETAGYFSPTDHKGADPYCIMLPPPNVTGTLHMGHAFQHTLMDALIR 66

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G     +   + AG   QI                                  V 
Sbjct: 67  YHRMLGDNTLWQPGTDHAGIATQI----------------------------------VV 92

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +   D+   +      E +L  V  +  ++   I R  ++ +    D             
Sbjct: 93  ERQLDQEGKDRRQMGREAFLERVWQWKEESGSTITRQ-MRRMGASCDWSRERFTMDETLS 151

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + ++   L R+G +Y G          Q    D +
Sbjct: 152 RAVTEVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLE 188


>gi|84515044|ref|ZP_01002407.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511203|gb|EAQ07657.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 843

 Score = 45.3 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ +      I   G  +  N      K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 5   SPAAIEPKWQDIWAKGQIFTANRSADKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARY 64

Query: 154 MAFSGYEV 161
              +G+ V
Sbjct: 65  KLATGHNV 72


>gi|330975722|gb|EGH75788.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|330899521|gb|EGH30940.1| valyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|317153419|ref|YP_004121467.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943670|gb|ADU62721.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 942

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 62/322 (19%), Positives = 104/322 (32%), Gaps = 43/322 (13%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISED-DFHRGDPSPIRDIIDNLAR 282
           +W+P   +  + +M+    D      +   +     I ED D    D   + DI D  A 
Sbjct: 439 QWIPAWGEERIHSMIANRPDWCISRQRNWGVPISALICEDCDQTWFDAKWVYDICDKYAE 498

Query: 283 QG----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
                 Y +E  +          C         R T + D      +  D   +Y     
Sbjct: 499 HETGCDYWFEAPIEALVPTGL-TCPKCGGSHWKRETDILD------VWFDSGTSYA---- 547

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  + + E  F   +Y+ GSD   G+       +    +      VL    V    D   
Sbjct: 548 AVVEQRAETRFPADLYLEGSDQHRGWFHSSLLASVGTRDVPPYKAVLTHGYVV---DADG 604

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I  + ++D+ G++ +R  +      E +      +              A
Sbjct: 605 RKMSKSIGNVIAPQEIIDKFGAEILRMWVSASNYQEDIRISDETLNRLVD---------A 655

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           Y R R+  R         DFD   R  +      D   L ++   A +   I  A    E
Sbjct: 656 YRRIRNTCRYLLSNLN--DFDPADRVAVADMLPLDRYALDMV---ARHHAAIGQAYAKFE 710

Query: 518 PYKLAFY--LYDLA-SVFHGHW 536
            +K+  Y  L++L        +
Sbjct: 711 FHKV--YHTLHNLCVVDLSSFY 730


>gi|295677084|ref|YP_003605608.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436927|gb|ADG16097.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 959

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ S+    +                +        +I+    N TG +H+GH     + 
Sbjct: 11  TLAKSFEPHTIEAHWGPEWEKRAYAAPSFDANRKDFSIQLPPPNVTGTLHMGHAFNQTIM 70

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 71  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I + ++ L    D          
Sbjct: 99  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITNQVRRLGASIDWSREYFTMDD 157

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 158 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 208


>gi|205356336|ref|ZP_03223101.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345721|gb|EDZ32359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 628

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 93/320 (29%), Gaps = 38/320 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNSTPQEYADKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L + +     +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             + +D            + E+ +          I+     +       + P   K    
Sbjct: 134 SQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEK-----DPILPKNKKNELI 188

Query: 302 CDMDRKQLLFRSTMVGDDVDRPL---LKSDGSYTYFAADLAYFKCK---YERGFDNM--- 352
             +         T    D    L   +  D    Y   D  +       ++   +N    
Sbjct: 189 NFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDFQNKGENAKFW 248

Query: 353 ---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
              ++++G D    + R   +          + +        +      KMSK  G+ + 
Sbjct: 249 PAHVHLVGKD----ILRFHTIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVK 304

Query: 410 LRHVVDEVGSDSVRFMMLWR 429
            + VVD  GS++ R+ +L  
Sbjct: 305 PKEVVDAYGSEAFRYFLLRE 324


>gi|171319520|ref|ZP_02908621.1| valyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095260|gb|EDT40250.1| valyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 955

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSGSA-ITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVTLFEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|163739858|ref|ZP_02147265.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161386892|gb|EDQ11254.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 868

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 34/268 (12%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y++P    +   +   +GI   +    K     +E     P+G +H+GH R   +GD +A
Sbjct: 4   YVAPEIEARWQDAWEKAGIFKAKRSADKPKYYVLEMF-PYPSGKLHMGHVRNYTMGDVIA 62

Query: 152 S--------LMAFSGYEVTR---EY-------YINDA-----GA---QINTLALSVFWRY 185
                    ++   G++      E        +  D      G    Q+  L LS+ W  
Sbjct: 63  RYKLSTGHSVLHPMGFDAFGMPAENAAMASGGHPKDWTYANIGTMVEQMKPLGLSLDWSR 122

Query: 186 QQALYNND------SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             A  +        +   +    G+  +       D     +L   + +     +  ++ 
Sbjct: 123 MFATCDESYYGQQQALFLDFLEKGLVYRKNAVVNWDPVDMTVLANEQVEGGRGWRSGALV 182

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              ++ +   K ++   D  ++  D     P+ +R + +N   +    +           
Sbjct: 183 ERRELTQWFFK-ISDYSDELLTALDTLENWPAKVRLMQENWIGKSRGLQFSFVRTDGGDP 241

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +    R   L  ++ VG   D P+ K+
Sbjct: 242 IEVYTTRPDTLNGASFVGISPDHPIAKA 269


>gi|27375738|ref|NP_767267.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|32171529|sp|Q89WQ1|SYL_BRAJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27348876|dbj|BAC45892.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 874

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  ++     I   +N   +     +E     P+G +H+GH R   +GD LA  M   G+
Sbjct: 14  RWQAAWDEKAIFVSKNDDSRPKYYVLEMF-PYPSGRIHIGHVRNYTLGDVLARFMRAKGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|330833647|ref|YP_004402472.1| glutamyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307870|gb|AEB82286.1| glutamyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 484

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLFARHHGGTFLIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  +LL   E K          
Sbjct: 64  -----RWLGIDWDESPETHEQYRQSERL-----DIYQKYVDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +            I      G V    L   ++  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSE------DEKAAYIAEREAAGIVPTVRLAVNETGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     Y     ++I   G 
Sbjct: 166 YKWNDMVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDYLMKISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|223933973|ref|ZP_03625931.1| glutamyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897365|gb|EEF63768.1| glutamyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 484

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  L  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLFARHHGGTFLIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  +LL   E K          
Sbjct: 64  -----RWLGIDWDESPETHEQYRQSERL-----DIYQKYVDQLL--AEGKAYKSYVTEEE 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            A  +  ++         + ++   +            I      G V    L   ++  
Sbjct: 112 LAAERERQEAAGETPRYINEYLGMSE------DEKAAYIAEREAAGIVPTVRLAVNETGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     Y     ++I   G 
Sbjct: 166 YKWNDMVKGEIEFEGGNIG--GDWVIQKRDGYPTY---NFAVVVDDYLMKISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|328950747|ref|YP_004368082.1| Isoleucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451071|gb|AEB11972.1| Isoleucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 1051

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 74/223 (33%), Gaps = 35/223 (15%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +   + +  A  NV+   LV    D    KMSK  G+ +    +++
Sbjct: 558 GIDQTRGWFNSLHQLGTMLFDSVAYRNVICHGLV---LDEKGQKMSKSKGNVVDPWEIMN 614

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYA-RCRSIFR 466
             G+D++R +M +         F    V+E  ++          F+V YA   +     R
Sbjct: 615 TFGADALRWYMYISAPPEADRRFGPSLVREVVRDYFLTLWNVYSFFVTYANLDKPNLTAR 674

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
            A +  P++D                     L   + E    +  A  A +P   +  L 
Sbjct: 675 PALEARPEVD-------------------RWLASRVQELIEEVTEALEAYDPTAASRALR 715

Query: 527 D-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRL--QLVHAV 566
           + +       +         +   A +R+     L   LV   
Sbjct: 716 NFVVEDLSQWYVRRNRRRFWKNADAADREAAYATLWEALVAVT 758


>gi|325831364|ref|ZP_08164618.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325486618|gb|EGC89066.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 77/207 (37%), Gaps = 26/207 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     +           V+ C       DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFQSSLLTSMGAYGVPPYKAVMHCGF---TVDGEGRKMSKSLGNGVDPAE 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G+D +R  +     S+ +     ++ +++ E        AY R R+ FR      
Sbjct: 630 VMAKSGADVLRLWVASVDYSQDVSIS-DEILQRTSE--------AYRRIRNTFRFLLGSL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL--AFY---LYD 527
            D D      +        D   +    HL      +  A  A + + +  A Y   + D
Sbjct: 681 DDFDDQKDAVSDWNALEPLDQWAMVRTKHLL---DDVSAAYDAYKFHYVYRAVYDYIVND 737

Query: 528 LASVFH-----GHWSHGRENPRLRFVQ 549
           L++V+        +S   ++PR R VQ
Sbjct: 738 LSAVYMDATKDRLYSEAPDSPRRRAVQ 764


>gi|322615639|gb|EFY12559.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618699|gb|EFY15588.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322621888|gb|EFY18738.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627613|gb|EFY24404.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322630919|gb|EFY27683.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637862|gb|EFY34563.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642320|gb|EFY38926.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322643905|gb|EFY40453.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322651019|gb|EFY47404.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322656728|gb|EFY53016.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659848|gb|EFY56091.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322661941|gb|EFY58157.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666311|gb|EFY62489.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672730|gb|EFY68841.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676160|gb|EFY72231.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680644|gb|EFY76682.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684462|gb|EFY80466.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323194201|gb|EFZ79398.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197346|gb|EFZ82486.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201536|gb|EFZ86600.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206050|gb|EFZ91012.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213061|gb|EFZ97863.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215432|gb|EGA00176.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219416|gb|EGA03901.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227720|gb|EGA11874.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323228890|gb|EGA13019.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236498|gb|EGA20574.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240001|gb|EGA24048.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241952|gb|EGA25981.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247899|gb|EGA31836.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251463|gb|EGA35334.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323258171|gb|EGA41848.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263683|gb|EGA47204.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265721|gb|EGA49217.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270165|gb|EGA53613.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQNIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|257791308|ref|YP_003181914.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475205|gb|ACV55525.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 77/207 (37%), Gaps = 26/207 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     +           V+ C       DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFQSSLLTSMGAYGVPPYKAVMHCGF---TVDGEGRKMSKSLGNGVDPAE 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G+D +R  +     S+ +     ++ +++ E        AY R R+ FR      
Sbjct: 630 VMAKSGADVLRLWVASVDYSQDVSIS-DEILQRTSE--------AYRRIRNTFRFLLGSL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL--AFY---LYD 527
            D D      +        D   +    HL      +  A  A + + +  A Y   + D
Sbjct: 681 DDFDDQKDAVSDWNALEPLDQWAMVRTKHLL---DDVSAAYDAYKFHYVYRAVYDYIVND 737

Query: 528 LASVFH-----GHWSHGRENPRLRFVQ 549
           L++V+        +S   ++PR R VQ
Sbjct: 738 LSAVYMDATKDRLYSEAPDSPRRRAVQ 764


>gi|217977850|ref|YP_002361997.1| valyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217503226|gb|ACK50635.1| valyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 902

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 70/243 (28%), Gaps = 34/243 (13%)

Query: 92  YLSPSYLRKILSSIV--VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
              P  +   + ++       + GR          I     N TG +H+GH   A + D 
Sbjct: 5   TFDPKTVEGRMLAVWSEADAFKAGRPDRKAAEPFAIVIPPPNVTGALHMGHALNATLQDI 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           LA      G +V  +   + AG    T+                               V
Sbjct: 65  LARFERMRGKDVLWQPGTDHAGIATQTV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++L ++          EK+L  V  +   +    I + L+ +    D          G 
Sbjct: 94  ERQLMERQEPGRREMGREKFLERVWAWKTASG-GAIVEQLQRIGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              +  +   L R+G +Y+                D + +   +       + P++   G
Sbjct: 153 SRAVVKVFVQLFREGLIYKDKRLVNWDPALLTAVSDLEVVQVETKGHLWHFNYPVVDDAG 212

Query: 330 SYT 332
             T
Sbjct: 213 VET 215


>gi|190891500|ref|YP_001978042.1| valyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190696779|gb|ACE90864.1| valyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 947

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ADAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-- 448
           L RD    KMSK  G+ I    ++DE G+D++R             F    +  Q ++  
Sbjct: 583 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIMAAQGRDVK 629

Query: 449 -NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +P     Y   R           F +++      + +P+ +E   +   ++  LA   R
Sbjct: 630 LDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTELARTER 685

Query: 508 VIENATIAQ 516
            +  A  A 
Sbjct: 686 DVTEALEAF 694


>gi|115351374|ref|YP_773213.1| valyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|115281362|gb|ABI86879.1| valyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 955

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVTLFEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|52841172|ref|YP_094971.1| isoleucyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81823443|sp|Q5ZWZ6|SYI_LEGPH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52628283|gb|AAU27024.1| isoleucyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 931

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 72/242 (29%), Gaps = 35/242 (14%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------GSYTYFAADLAYF 341
               K     +       F    S ++GDD       +D        G   Y        
Sbjct: 490 ELIEKVAVMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSV-----L 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K   +  F   +Y  GSD   G+       A A+    A   VL         D    K+
Sbjct: 545 KHNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAAYKTVLTHGY---TVDAEGKKL 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY R
Sbjct: 602 SKSKGNYVALDKLVNQHGADILRLWVASTDYRHEVSISEEIIKRNAD---------AYRR 652

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY 519
            R+  R       D +      + I  +   +     L    L +    I  A      +
Sbjct: 653 IRNTARFLLANLFDFN---PASDCIDAKELLELDRWALKRCQLLQ--EEIITAYENYHFH 707

Query: 520 KL 521
            +
Sbjct: 708 LI 709


>gi|327462090|gb|EGF08419.1| methionine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 665

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G+ +         K   +LL+   +K++    DY  + + ++    L  
Sbjct: 64  EAGITPQAYVDGMVV-------GVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|258422624|ref|ZP_05685530.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257847196|gb|EEV71204.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 471

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 4   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 61

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 62  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 113

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +       +  +KD   Q           A     D++     F  G        
Sbjct: 114 TSNPRVMDHMNDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       D P  +    +    +
Sbjct: 164 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECS 214

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 215 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 266

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ E+  D +RF M+       ++++   V+     
Sbjct: 267 DNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNLELVESARSG 319


>gi|152980087|ref|YP_001352005.1| valyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166225523|sp|A6SUQ8|SYV_JANMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|151280164|gb|ABR88574.1| valyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 965

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 60/228 (26%), Gaps = 45/228 (19%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ +     +       Y           +I+    N TG +H+GH     + D L  
Sbjct: 7   FDPADIEAFWRTEWEKRGYYTATTDADKPAFSIQLPPPNVTGTLHLGHGFNQTIMDGLTR 66

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G+        + AG   QI                             V  + + 
Sbjct: 67  YHRMRGFNTAWIPGTDHAGIATQI-----------------------------VVERQLD 97

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +   ++      F E+ W    K+ S   +   IR     L    D             
Sbjct: 98  AQKITRHDLGREKFVEKVWE--WKEKSGSTITGQIR----RLGASPDWSREYFTMDEPRS 151

Query: 271 SPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
             + ++   L  QG +Y G        +L    S      + +  Q+ 
Sbjct: 152 KTVTEVFVRLVEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGQMW 199


>gi|86146188|ref|ZP_01064514.1| glutamyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218708771|ref|YP_002416392.1| glutamyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|85836135|gb|EAQ54267.1| glutamyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218321790|emb|CAV17750.1| Glutamyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 475

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 94/280 (33%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MQWMGMEWDEGPYYQSKRFDRYNEMVDKL------LAEDKAFKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +             +  R D +  + +  N A + G         PK  +    D  R 
Sbjct: 112 QEE----------NKEMARYDANHPKIVAANEAAKEGDACVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|330950950|gb|EGH51210.1| valyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|320329798|gb|EFW85786.1| valyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|257795372|ref|ZP_05644351.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258408941|ref|ZP_05681222.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420421|ref|ZP_05683364.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258439342|ref|ZP_05690274.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444082|ref|ZP_05692419.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446350|ref|ZP_05694508.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448443|ref|ZP_05696558.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258453799|ref|ZP_05701773.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282894964|ref|ZP_06303187.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282928866|ref|ZP_06336457.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|257789344|gb|EEV27684.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840292|gb|EEV64755.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843611|gb|EEV68017.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257847679|gb|EEV71678.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850752|gb|EEV74697.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854944|gb|EEV77889.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858312|gb|EEV81199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257864055|gb|EEV86809.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282589474|gb|EFB94563.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282762646|gb|EFC02783.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 471

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 114/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 4   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 61

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 62  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 113

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    +  +  +KD   Q           A     D++     F  G        
Sbjct: 114 TSNPRVMDHMDDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       + P  +    +    +
Sbjct: 164 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECS 214

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 215 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 266

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 267 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 319


>gi|254780079|ref|YP_003058186.1| leucyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001992|emb|CAX30251.1| Leucine tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Helicobacter pylori B38]
          Length = 808

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 6/74 (8%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+      + K           +         K  I  +   P+G +H+GH R   +G
Sbjct: 4   FINI------IEKKWQEFWWKNKSFEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIG 57

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 58  DALARYYRLHHYNV 71


>gi|227529487|ref|ZP_03959536.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350572|gb|EEJ40863.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 472

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 103/342 (30%), Gaps = 46/342 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN---DAGA 172
                  VN+          +H+G+ R A+  DT+   + F GY+V    Y++   D   
Sbjct: 16  KPQTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYKV---NYVSNFTDVDD 72

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           ++   A        Q          E        K +  E A  +     N PE      
Sbjct: 73  KMIKAAHEQGITVPQLADKYIQAFMEDT------KAINIEPATMHPRATENIPE------ 120

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFI---SEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                ++ +  +I     A     D++       D+ +     I D+    +        
Sbjct: 121 ----IIKFIQGLIDKGY-AYEKDGDVYYRARKFKDYGQLSGQSIDDLEVGASEH------ 169

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                  +  +K D     L   +     + D P  K    +    + ++       +  
Sbjct: 170 ---VSDDEINKKEDPMDFALWKAAKPGEINWDSPWGKGRPGWHIECSVMST------KYL 220

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGD 406
              I + G          E   A    K  Q  V   +    V + +D    KMSK   +
Sbjct: 221 GKTIDIHGGGQDLEFPHHENEIAQSEAKTGQKFVRYWMHNGFVTIGKD--NEKMSKSLHN 278

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           FIT+  ++ +V    +RF M   +    + +    + +    
Sbjct: 279 FITVHDIIKQVDPQVLRFFMATTQYRRPIQYSEDNLIDAKNN 320


>gi|220934751|ref|YP_002513650.1| glutamyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996061|gb|ACL72663.1| glutamyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 470

 Score = 45.3 bits (106), Expect = 0.027,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 98/285 (34%), Gaps = 54/285 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R                   
Sbjct: 8   APSPTGYLHIGGARTALFSWLYARKHGGDFILRVEDTDLARSN----------------- 50

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                A+    S L   Y  G + +    +   +   +LL+  ++ +        + AM 
Sbjct: 51  AESVNAILEGMSWLGLEYDEGPFYQTQRFDRYKEVIQQLLD-ADKAYHCYCTKEELDAMR 109

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +      +  N +   +      HR +P           R+G         P    T   
Sbjct: 110 EQ-----QMANKEKPRYDGRCR-HRTEP-----------REGVEPVVRFRNPTEGATVVD 152

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM R +++F+++ +    D  + +SDGS TY    +      ++    ++I   G DH  
Sbjct: 153 DMVRGRVVFQNSELD---DLIIARSDGSPTYNFTVV---VDDWDMQISHVIR--GDDHLN 204

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A+  +  +   L    + L  DG   K+SKR G  
Sbjct: 205 NTPRQINIFKALGVEPPRYAHL---PMILGPDGA--KLSKRHGAV 244


>gi|308063936|gb|ADO05823.1| valyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 872

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 98/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIH---RTIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LKARDKVVEKLKENA 333


>gi|225872764|ref|YP_002754221.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792609|gb|ACO32699.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 887

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 30/125 (24%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIG---KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L  +P+ +         +  +          K     +E +   P+G +H+GH R   +G
Sbjct: 29  LRYNPAEIEPRWQERWAAQPDLYATEPPESGKPKYYVLEML-PYPSGQLHMGHVRNYSIG 87

Query: 148 DTLASLMAFSGYEV--------------------------TREYYINDAGAQINTLALSV 181
           D LA  M   GY V                               I     Q++ L LS 
Sbjct: 88  DALARYMWMQGYNVLHPMGWDAFGLPAENAALKNNTPPREWTLSNIAHMHKQMDRLGLSY 147

Query: 182 FWRYQ 186
            WR +
Sbjct: 148 DWRNE 152


>gi|209519277|ref|ZP_03268078.1| valyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209500289|gb|EEA00344.1| valyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 959

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 45/231 (19%)

Query: 92  YLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ S+    +                +        +I+    N TG +H+GH     + 
Sbjct: 11  TLAKSFEPHTIEAHWGPEWEKRAYAAPSFDANRKDFSIQLPPPNVTGTLHMGHAFNQTIM 70

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 71  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 98

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I + ++ L    D          
Sbjct: 99  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITNQVRRLGASIDWSREYFTMDD 157

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 158 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLW 208


>gi|50409467|ref|XP_456877.1| DEHA2A12584p [Debaryomyces hansenii CBS767]
 gi|49652541|emb|CAG84852.1| DEHA2A12584p [Debaryomyces hansenii]
          Length = 528

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 99/300 (33%), Gaps = 30/300 (10%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G    +  I     V   F + +PTG +H+G  R A+    LA     +G +        
Sbjct: 34  GESKKKVSIHPTFPVRTRF-APSPTGYLHLGSLRTALYNYLLA---KNTGGQFILRLEDT 89

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D    I+    +++   +      D    EG   G Y +     +  KY   LL   +  
Sbjct: 90  DQKRLIDDAESNIYDTLKWCGIKIDEGPNEGGAYGPYRQSDRMAIYQKYVETLLKSGDAY 149

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVY 287
           +    KD      +  +R+    L     +      FH   +   +  +I   +   Y  
Sbjct: 150 YCYCSKDR-----LNTLRETASQLKPPTTVTYDRKCFHDHQEAENMEPVIRFKSPDRYEP 204

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L   +     + ++  ++            D  ++KSDG  TY  A++      +  
Sbjct: 205 FTDLIHGQLNLQPQYNISDRR----------YDDFVIMKSDGLPTYHFANV---VDDHLM 251

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              ++I   G +      +  A+  A   +  +        + L       K+SKR+GD 
Sbjct: 252 KITHVIR--GEEWLPATPKHIALYRAFGWEPPKFIH-----IPLLTSLEDKKLSKRSGDI 304


>gi|57634618|ref|NP_371054.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
          Length = 476

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 114/353 (32%), Gaps = 38/353 (10%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +    L + +    E  + +     K+ +          +H+G+ R A+  D +     +
Sbjct: 9   FKMITLYNTLTRQKEVFKPIEPGKVKMYV--CGPTVYNYIHIGNARPAINYDVVRRYFEY 66

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V    Y+++     + L      +  Q L  +  ++ E Y    +       +   
Sbjct: 67  QGYNVE---YVSNFTDVDDKLI-----KRSQELNQSVPEIAEKYIAAFHEDVGALNVRKA 118

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S+  +    +  +  +KD   Q           A     D++     F  G        
Sbjct: 119 TSNPRVMDHMDDIIQFIKDLVDQGY---------AYESGGDVYFRTRKF-EGYGKLSHQS 168

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ID+L          +         K D     L  ++       + P  +    +    +
Sbjct: 169 IDDLK---------VGARIDAGEHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECS 219

Query: 337 DLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
            +A+     E G    I+  GSD    +      +A + +   A        +   + + 
Sbjct: 220 VMAFH----ELGPTIDIHAGGSDLQFPH--HENEIAQSEAHNHAPFANYW--MHNGFINI 271

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
              KMSK  G+FI +  ++ EV  D +RF M+       ++++   V+     
Sbjct: 272 DNEKMSKSLGNFILVHDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSG 324


>gi|66044339|ref|YP_234180.1| valyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503207|sp|Q4ZXI0|SYV_PSEU2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|63255046|gb|AAY36142.1| Valyl-tRNA synthetase, class Ia [Pseudomonas syringae pv. syringae
           B728a]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|15604472|ref|NP_220990.1| glutamyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6686024|sp|Q9ZCT8|SYE2_RICPR RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|3861166|emb|CAA15066.1| GLUTAMYL-TRNA SYNTHETASE (gltX2) [Rickettsia prowazekii]
 gi|292572248|gb|ADE30163.1| Glutamyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 470

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 95/288 (32%), Gaps = 46/288 (15%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I   + +PTG +H+G  R A+     A              + N          L 
Sbjct: 1   MTNIITRFAPSPTGFLHIGSARTALFNYLFAR-------------HNN------GKFFLR 41

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    ++          E  + G+    +  +    + S+  +  +E  L ++K+     
Sbjct: 42  IEDTDKKRSTKEAV---EAIFSGLKWLGLNWDGEVIFQSKRNSLYKEAALKLLKEGKAYY 98

Query: 241 MMKIIRDDLKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                 +  K           FI   ++    PS     I  + R        L  P+  
Sbjct: 99  CFTRQEEIAKQRQQALKDKQHFIFNSEWRDKGPSTYPADIKPVIR--------LKVPREG 150

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           +    D  + +++  ++ +    D  L+++DG+ TY    LA     ++ G  ++I   G
Sbjct: 151 SITIHDTLQGEIVIENSHID---DMILIRTDGTATYM---LAVIVDDHDMGITHIIR--G 202

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            DH     R  A+  A   +   +       + L       K+SKR G
Sbjct: 203 DDHLTNAARQIAIYHAFGYEVPNMTH-----IPLIHGADGTKLSKRHG 245


>gi|305431875|ref|ZP_07401042.1| leucine--tRNA ligase [Campylobacter coli JV20]
 gi|304444959|gb|EFM37605.1| leucine--tRNA ligase [Campylobacter coli JV20]
          Length = 810

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             + + K    I      +         K  I  +   P+G +H+GH R   +GD +A  
Sbjct: 4   DANLIEKRWQEIWDKNEYFEPKDDLTLPKKYILSMFPYPSGRIHMGHVRNYSIGDAIARY 63

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 64  YRKIGYNV 71


>gi|290891337|ref|ZP_06554398.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429]
 gi|290478983|gb|EFD87646.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429]
          Length = 675

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 102/342 (29%), Gaps = 58/342 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V+ D++A      G +V             +   L +  + + A  +
Sbjct: 16  PSGKLQLGNTYTTVLADSVARFHRALGEDVF-------FLTGTDEHGLKIQEKAEAAGKS 68

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
               L E       L  +     DK+      + E     I K +  +    I + +   
Sbjct: 69  EMEYLDEMAVSIKKLWKLMNISYDKFIRTTDAYHERVVQHIFKKFMDEG--DIYKGNYTG 126

Query: 252 LN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              +  + + +E             +I   A  G+     +   K +T           L
Sbjct: 127 WYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGH----EVQLVKEETYFFKMSKYSDWL 182

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERGF------DNMIYVM---- 356
            +      +  +P  + +   + F      DLA  +  +  G        ++IYV     
Sbjct: 183 LQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWIDAL 242

Query: 357 --------------GSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD------ 394
                           DH    + K   A    V ++  + + +   ++           
Sbjct: 243 SNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLPGE 302

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ +    +    G D+VR+ +L 
Sbjct: 303 VLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLR 344


>gi|325695003|gb|EGD36907.1| methionine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 664

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 63  EAGISPQAYVNG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 230 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 290 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 338


>gi|317490445|ref|ZP_07948927.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910438|gb|EFV32065.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 77/207 (37%), Gaps = 26/207 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     +           V+ C       DG   KMSK  G+ +    
Sbjct: 573 YLEGSDQHRGWFQSSLLTSMGAYGVPPYKAVMHCGF---TVDGEGRKMSKSLGNGVDPAE 629

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G+D +R  +     S+ +     ++ +++ E        AY R R+ FR      
Sbjct: 630 VMAKSGADVLRLWVASVDYSQDVSIS-DEILQRTSE--------AYRRIRNTFRFLLGSL 680

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL--AFY---LYD 527
            D D      +        D   +    HL      +  A  A + + +  A Y   + D
Sbjct: 681 DDFDDQKDAVSDWNALEPLDQWAMVRTKHLL---DDVSAAYDAYKFHYVYRAVYDYIVND 737

Query: 528 LASVFH-----GHWSHGRENPRLRFVQ 549
           L++V+        +S   ++PR R VQ
Sbjct: 738 LSAVYMDATKDRLYSEAPDSPRRRAVQ 764


>gi|262039366|ref|ZP_06012679.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746628|gb|EEY34154.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 883

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 57/200 (28%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + +    I      +      +    +I     N TG +H+GH     + DT+ 
Sbjct: 8   TYSPKEIEEKWYKIWEEKGYFNAQHNDEKPGYSIVIPPPNVTGILHMGHMLDNAIQDTII 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                SG++       + AG               + +  ++    E      +LK    
Sbjct: 68  RYKRMSGFDTLWVPGTDHAGI--------ATQNKVERMLKDEGTSKEEIGREEFLKR-TW 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  +K+                          +I   L+ L +  D          G   
Sbjct: 119 EWKEKHG------------------------GLITKQLRRLGVSLDWSRERFTMDEGLSK 154

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            ++++   L   G +Y G  
Sbjct: 155 AVKEVFIKLYNDGLIYRGEY 174


>gi|304315917|ref|YP_003851062.1| glutamyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777419|gb|ADL67978.1| glutamyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 484

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 98/290 (33%), Gaps = 49/290 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     +       ++     ++TR             L     
Sbjct: 8   APSPTGAIHIGNIRTALFNYLFSRSEGAKLILRIEDTDLTRSS------KDFEKLIFK-E 60

Query: 183 WRYQQALYNNDSDLPEGY--YPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYS 237
             +    ++   D P  Y  Y      H+ ++ A+   K       +   + L   ++ S
Sbjct: 61  LNWLGIEWDEGPDKPGDYGPYRQSERLHIYRQYAEQLIKEGKAYRCYCTPEELDKDREES 120

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V+      R D+   + +      E +             +   RQG         P   
Sbjct: 121 VK------RGDIPRYSGRCRHLTKEQE-------------EEYLRQGRKPSIRFIIPDDV 161

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G
Sbjct: 162 IIAFDDMIKGRIEIKSDTLGGDM--IIVKSDGMPTY---NFAVVIDDTLMKISHVIR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            DH     +   +  A+  K     V     + L  D    K+SKR G+ 
Sbjct: 215 EDHIYNTPKQLLIYEALGFKPP---VFAHAPLILGPDRT--KLSKRHGNT 259


>gi|218673394|ref|ZP_03523063.1| valyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 341

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N        +I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ADAFRAGTNAKPGAETFSIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172


>gi|297583961|ref|YP_003699741.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142418|gb|ADH99175.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 920

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 79/230 (34%), Gaps = 45/230 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D     L    + +W+P   +  +  M++  R D      +A  +   +F  ED    
Sbjct: 415 IKDFREDLLKEIEDVQWMPKWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYGEDGEPI 473

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                I  + D     G            + EG         T   + D   + F S   
Sbjct: 474 ITDETISHVSDLFREHGSNIWFEKDAKDLLPEGFSSEHSPNGTFTKETDIMDVWFDS--- 530

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDH-SGYVKRLEAVAAA 373
                       GS        A  + +Y+  R  D  +Y+ GSD   G+     + A A
Sbjct: 531 ------------GSSH-----QAVLEERYDQVRPAD--LYLEGSDQYRGWFNSSLSTAVA 571

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V+ K     VL         DG   KMSK  G+ +   +V+ ++G+D +R
Sbjct: 572 VTGKAPYKGVLSHGF---TLDGEGKKMSKSLGNTVIPANVMKQLGADILR 618


>gi|197117146|ref|YP_002137573.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690875|sp|B5EE39|SYL_GEOBB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197086506|gb|ACH37777.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 824

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + +           +  N      K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 7   PSAVEEKWQGYWAEHKSFKANEDPSRKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFK 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMQGYNV 73


>gi|114776713|ref|ZP_01451756.1| Glutamyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552799|gb|EAU55230.1| Glutamyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 462

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 54/289 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R     D   Q+    L+  
Sbjct: 8   APSPTGMLHIGGARTALFSWLFARHHGGEFVLRIEDTDRERST---DEATQVILDGLTWL 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L  +   + +      ++  +  E   K       +   + L  +++    A  
Sbjct: 65  -----GLDWDQEPVFQAERQAEHV--LAVEQLIKEGHAYRCYCSREELDDMREAQRAAGK 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K + D                D     P  +R                   P    T   
Sbjct: 118 KPMYD---------GRCRHRSDRPENAPFVVR----------------FRSPDEGDTIVN 152

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+    ++F +  +    D  LL++DG+ TY  A +A        G  ++  V GSDH  
Sbjct: 153 DLVLGPVVFPNAELD---DLILLRTDGTPTYNLAVVA---DDSAMGITHV--VRGSDHLN 204

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+     Q        + L       KMSKR G      
Sbjct: 205 NTPRQIQLYQALGLPMPQFAH-----IPLIHGPDGAKMSKRHGSVALTE 248


>gi|320322893|gb|EFW78984.1| valyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|315122341|ref|YP_004062830.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495743|gb|ADR52342.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 512

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 63/349 (18%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  I    A P    H+GH    ++ D LA      G +V      ++ G +I   A +
Sbjct: 6   EKFYISTAIAYPNAKPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEYGQKIAKSAQN 65

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYS 237
                +  +  N +D               +++AD +     + +   E++     +   
Sbjct: 66  AGIETKIFVDQNSADF--------------RQMADVFGISYDDFIRTTEKRHHDTCRILW 111

Query: 238 VQAMMKIIRDDLKALN-----IQHDIFISEDDFHRGDPSPIRDI----IDNLARQGY--- 285
            + + K   D  K        ++ +++  +D+ ++G+     +     +  +  +GY   
Sbjct: 112 QKILDKG--DIYKGFYSGWYSLRDEMYCGDDEVYKGEDGQHYNAQKNPVQWMEEEGYFFR 169

Query: 286 --VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS---------------- 327
              Y+  L        +      ++    S +     D  + +                 
Sbjct: 170 LSAYQDKLLAYYDSHPEFILPLERRNEIVSFVKSGLKDLSISRKTFDWGIKIPNDPQYIM 229

Query: 328 ----DGSYTYFAAD-LAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
               D    Y  A  L       +  F   D  ++V+G D    + R  AV        A
Sbjct: 230 YVWIDALTNYLTATGLLPHPNGEKAKFWPAD--LHVIGKD----IVRFHAVYWPAFLLSA 283

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            + +        +      K+SK  G+ I    V+ E+G D++R+ ++ 
Sbjct: 284 NLPLPKTIFSHGFILNKGEKISKSLGNVIDPMEVIKEIGVDALRYFLIR 332


>gi|302188390|ref|ZP_07265063.1| valyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|242240958|ref|YP_002989139.1| valyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242133015|gb|ACS87317.1| valyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPHDIEQPLYEHWEKQGYFKPNGDTSKDSFSIMIPPPNVTGSLHMGHAFQQTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKNRHDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|297566936|ref|YP_003685908.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851385|gb|ADH64400.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 872

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 67/257 (26%), Gaps = 43/257 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P  +    +              GKG     I     N TG +H+GH     + DTL
Sbjct: 10  TYDPQAVEPRWAEEWAKNPLKPELNAGKGKGPFTIVIPPPNVTGNLHLGHALDNTIIDTL 69

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  GYE       + AG     L                               V 
Sbjct: 70  IRFKRMQGYEALYLPGTDHAGITTQVL-------------------------------VE 98

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +ELA K      +   EK+L  V ++  +    I+   L+ +    D          G  
Sbjct: 99  RELA-KEGKSRHDLGREKFLERVWEFKEKNGGTILYQ-LRRIGASCDWSRERFTMDPGLS 156

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK--------QLLFRSTMVGDDVDR 322
             +R        QG  Y G          Q    D +        QL        +D   
Sbjct: 157 RAVRRAFVEYYHQGLAYRGARIVNWDPVAQTVLSDLEVDREERQSQLWVLEYPF-EDEPG 215

Query: 323 PLLKSDGSYTYFAADLA 339
            +  +        AD+A
Sbjct: 216 GIQIATQRPETIFADVA 232


>gi|57167974|ref|ZP_00367113.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020348|gb|EAL57017.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 810

 Score = 45.3 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             + + K    I      +         K  I  +   P+G +H+GH R   +GD +A  
Sbjct: 4   DANLIEKRWQEIWDKNEYFEPKDDLTLPKKYILSMFPYPSGRIHMGHVRNYSIGDAIARY 63

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 64  YRKIGYNV 71


>gi|167771410|ref|ZP_02443463.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
 gi|167666050|gb|EDS10180.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
          Length = 945

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 71/235 (30%), Gaps = 40/235 (17%)

Query: 353 IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G+D   G+ +     + A         V     V    DG   KMSK  G+ +   
Sbjct: 574 LYLEGTDQYRGWFQSSLLTSVAWKGVAPYKTVCTHGWVV---DGEGRKMSKSLGNGMEPS 630

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + D+ G+D +R  +        +      +K+ S+              R I   A+ I
Sbjct: 631 EITDQYGADILRLWVASADYHADIRISKDILKQLSE------------VYRKIRNTARYI 678

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR---VIENATIAQEPYKLAFYLYDL 528
             ++      ++ +  +         L      +      +  A    E + +  Y    
Sbjct: 679 LGNIAGFTPDKDAVAFDRLTGLDRWAL----TRFNELVKTVTEAYDRFEFHII--Y---- 728

Query: 529 ASVFHGHWSHGRENPRLRF------VQANNRKLTMMRLQLVHAVASIINSGLNII 577
               H   +    N  L        V+A + +          +    I  G+ ++
Sbjct: 729 -HALHNFCTIDMSNFYLDVIKDRLYVEAPDSEDRRA----AQSTIYTILRGMTLL 778


>gi|332968487|gb|EGK07550.1| valine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 976

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         Y +         +I     N TG +H+GH     + D+L   
Sbjct: 22  NPGEVEQGMYQRWEDN-GYFQPKYNSDESFSIALPPPNVTGSLHMGHGFNNAIMDSLTRY 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                    E       +K      
Sbjct: 81  HRMLGDNTLWQPGTDHAGIATQMVV-------------------ERRLNAEGIKR----- 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V ++  ++   I R  ++ L    D          G  + +
Sbjct: 117 --------TDLTREDFIDKVWEWKEESGGNITRQ-IRRLGSSVDWSRERFTMDEGLSNAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L   G +Y G          Q    D +
Sbjct: 168 KEVFVRLHEDGLIYRGKRLVNWDPKFQTALSDLE 201



 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 28/272 (10%)

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPS 271
            ++ +   +   E+  +  V        M  +  DL+   I   ++       ++  + +
Sbjct: 400 VEQLAKPAIEAVEDGRIEFVPAQYKNMYMAWM-TDLQDWCISRQLWWGHRIPAWYDNEDN 458

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD--RPLLKSDG 329
                 +   R  Y  +  +   + +             F +   GDD    + L     
Sbjct: 459 IYVARDEAEVRSKYNLDDSVELRQDEDVLDTWFSSGLWTFSTLGWGDDTQDQKALQTFHP 518

Query: 330 SYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +       D+ +F          MI +       +  + E     V  K   ++      
Sbjct: 519 TSVLVTGFDIIFFWV------ARMIMMT-----MHFMKNEDGTPQVPFKTVYVH------ 561

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-K 447
             L RD    KMSK  G+ +    ++D  G D +  ++  R ++ +   D  K+++Q+ K
Sbjct: 562 -GLVRDSHGQKMSKSKGNVLDPIDLID--GID-LETLVEKRTSNMMNPKDAAKIEKQTLK 617

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           E P     Y     R  F        D++FDL
Sbjct: 618 EFPEGIPAYGTDALRFTFTSLASTGRDINFDL 649


>gi|325925505|ref|ZP_08186896.1| valyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544097|gb|EGD15489.1| valyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 973

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGQTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|253828110|ref|ZP_04870995.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511516|gb|EES90175.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 927

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 37/226 (16%)

Query: 348 GFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G+   +Y+ GSD   G+      V+ AV+EK     ++         D    KMSK  G+
Sbjct: 565 GYPASLYLEGSDQHRGWFHSSLLVSCAVNEKAPYKAIVTHGFTM---DEKGEKMSKSKGN 621

Query: 407 FITLRHVVDEVGSDSVR--FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
            +  + V+ E GS+ +R    M   +N + +      + +Q  EN        Y + R+ 
Sbjct: 622 VVVPKEVLKEFGSEILRLWVAMSDYQNDQRIS---NNILKQVGEN--------YRKIRNT 670

Query: 465 FR------QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
            R         +      F+     ++    E       L     E+ + I+        
Sbjct: 671 IRFLLANTNGLESLEVTSFNPIDLWILKSARECFEKVNALFGE-YEFSKAIQE------- 722

Query: 519 YKLAFYLY-DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             L ++L  +L+ +   +    ++N     + +  R+ +   + L+
Sbjct: 723 --LTYFLNTELSGI---YLDICKDNLYCNALSSEERRASQSVMALI 763


>gi|241667174|ref|ZP_04754752.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875726|ref|ZP_05248436.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841747|gb|EET20161.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 935

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 17/172 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +    VA +    +    V     V    D    KMSK  G+  + +
Sbjct: 555 LYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVV---DEHGRKMSKSLGNVTSPQ 611

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + + +G+D +R           +     ++ +++ +             R +   A+ +
Sbjct: 612 DIYNTLGADILRLWTASTDYKSEMAVS-DQILKRTADT-----------YRRLRNTARFL 659

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             +L+      ++I  +      +  +     E+   I  A    + + +A 
Sbjct: 660 LSNLEGFNPKTDIIEFDKLVKLDQWAIAKT-KEFQDRIIEAYDKYQTHTVAQ 710


>gi|195326171|ref|XP_002029803.1| GM24903 [Drosophila sechellia]
 gi|194118746|gb|EDW40789.1| GM24903 [Drosophila sechellia]
          Length = 994

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 98/354 (27%), Gaps = 62/354 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +     + +        K     +     N TG +H+GH   A V D +A      G
Sbjct: 51  AYWVREHRQANLPKASASSCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQREQLG 110

Query: 159 YEVTREYYINDA--GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y+V       D   G     +A  V                           V + +A  
Sbjct: 111 YQV-------DWVPGTDHAGIATQVV--------------------------VERTIAAS 137

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            +          +L  V  +  +     I  DL+ L  + +               +   
Sbjct: 138 QAKTRHELGRSAFLDEVWRWKAEKG-AGIVQDLRQLGCKLNWKREYFTMDEQQAHAVNVA 196

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FA 335
            + L  +G +             +    D   +   S  + + V+  +   D    +   
Sbjct: 197 FERLFEEGLIQRRNSVVNWCTALRSAISD---IEVDSVEIKEPVEIAVPGYDRKVLFGRM 253

Query: 336 ADLAYFKCKYERGFDNMI--YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            D AY     E   D  +   V+ +       R E +   + +    ++ L     + YR
Sbjct: 254 YDFAYHVVDGETLPDGSVEEIVVST------TRPETI---LGDVAVAVHPLDPRYTK-YR 303

Query: 394 DGMPIKMSK--RAGDF--ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +   +K+    R      +   +V  E G+ +V+             FDF    
Sbjct: 304 NIDQVKLKHPFRDDTIPLVFDINVDQEFGTGAVKI------TPAHDKFDFELAT 351


>gi|67983559|ref|XP_669151.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56482939|emb|CAI02739.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 183

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 325 LKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           LK+D +YTY   DLA    + Y    D +IYV+  +   +  ++ ++   ++     +  
Sbjct: 96  LKNDIAYTYAGIDLASIYYRVYFEKADKIIYVVDENQKNHFMQIFSIYKNMNMFSKDVEY 155

Query: 384 LLCELVRLYRDGMPIKMS 401
                  L  +   IK  
Sbjct: 156 KCICYGFLNNEKKKIKTK 173


>gi|288906268|ref|YP_003431490.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325979280|ref|YP_004288996.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732994|emb|CBI14575.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325179208|emb|CBZ49252.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 485

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 103/302 (34%), Gaps = 44/302 (14%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D 
Sbjct: 2   PKKIRVRY-APSPTGLLHIGNARTALFNYLYARHHGGDFVIRI-----EDTDRKRHVED- 54

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                           + L  +  + P+ +    Y +    ++  KY  +LL        
Sbjct: 55  -------GERSQLENLKWLGMDWDESPQTH--EKYRQSERLDIYQKYIDQLLAEG----- 100

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
              K Y  +  +   R+  +A   +   +I+E  F           I     +G V    
Sbjct: 101 KAYKSYVTEEELAAERERQEAAG-ETPRYINE--FLGMSEDEKAAYIAEREAKGIVPTVR 157

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L   +S   +  D+ +  + F    +G   D  + K DG  TY   + A     +     
Sbjct: 158 LAVNESGIYKWHDIVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++I   G DH     +   V  A+  +  +       +  +       K+SKR  + +  
Sbjct: 213 HVIR--GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQF 266

Query: 411 RH 412
             
Sbjct: 267 IE 268


>gi|269219680|ref|ZP_06163534.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210922|gb|EEZ77262.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 894

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 28/178 (15%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++ GSD+VR+     +      FD  ++K          
Sbjct: 603 DPDRKKMSKSKGNVVTPMALLEKHGSDAVRYWAASARLGVDATFDEQQMK------IGRR 656

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +                     D D+            + ++  ++  LA    V++ AT
Sbjct: 657 LAMKVLNASKFALSMGGEGAPADVDVAAV--------TEPADRAVLAGLA---DVVDEAT 705

Query: 514 IAQEPYKLAFY----LYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            + +      Y      +LA S F        E  + R   ++       R+ L  AV
Sbjct: 706 ASFD-----AYDHTRALELAESCFWSFCDDYLELVKDRAY-SDEPSSRSARVALNVAV 757


>gi|296127077|ref|YP_003634329.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018893|gb|ADG72130.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 853

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 90/308 (29%), Gaps = 27/308 (8%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N       + K           +         K  +  +   P+G MH+GH     + D+
Sbjct: 4   NFT----TIEKKWQKFWKDNNSFKTVSKPTDKKYYVLEMFPYPSGKMHMGHVSNYTIADS 59

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPGVY 205
           +A      GY++      +  G      A+       +    N +++ E      Y   +
Sbjct: 60  IARYYRLLGYDILHPMGWDAFGMPAENAAIEHKTHPAEWTLKNIANMKEQLNLLGYSYDW 119

Query: 206 LKHVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            + V   L D  K+    +    EK L + +              L    +  +      
Sbjct: 120 DREVTTCLPDYYKWGQWFILKMYEKGL-LYRKGGDVNWCDHCNTVLANEQVTPEGTCWRC 178

Query: 264 DFH------RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D              + D  + L     + EG   P      QK  + R    + +  + 
Sbjct: 179 DGEVTKKKLEQWYIKVTDYAEQLDADLKLLEG-YWPDNVIAMQKNWIGRSVGAYVNFTLD 237

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG----YVKRLEAVAAA 373
           D  D P+  +     Y    +A         +D ++ +  ++       ++K+   +   
Sbjct: 238 DGKDFPIFTTRPDTIYGVTYMAIAW-----NYDGLLDMCTAEQKNAVEEFIKKSAKIDQK 292

Query: 374 VSEKKAQI 381
              +K  +
Sbjct: 293 TDYEKEGV 300


>gi|283798326|ref|ZP_06347479.1| glutamate--tRNA ligase [Clostridium sp. M62/1]
 gi|291073909|gb|EFE11273.1| glutamate--tRNA ligase [Clostridium sp. M62/1]
          Length = 483

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 64/401 (15%), Positives = 137/401 (34%), Gaps = 60/401 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+  A      +  
Sbjct: 9   APSPTGKMHVGNLRTALYAYLIAKHEGGDYILRI-----EDTDQERYVEGA---TEIIYN 60

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++           D   P G Y     +  G  +  +Y+ +L++  E  +        + 
Sbjct: 61  TLKDTGLIHDEGPDVGGPVGPYVQSDRQKAG--IYMEYAKKLIDKGE-AYYCFCDQERLN 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           ++ K +  +   +  +H + +S            ++ ++     G  +      P+   T
Sbjct: 118 SLRKTVNGEEIMVYDKHCLHLS------------KEEVEANLAAGKPFVIRQNNPQEGRT 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              D     +   S    +  D  L+KSDG  TY  A++       +     + +V+ G+
Sbjct: 166 TFHDEIYGDI---SVDNSELDDMVLIKSDGYPTYNFANV------VDDHLQKITHVVRGN 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           ++     +   +  A   +      + C  +    +    K+SKR+G   + + ++D+  
Sbjct: 217 EYLSSSPKYNRLYEAFGWEVP--VYVHCPTIT---NEEHKKLSKRSGHS-SYQDLIDQGF 270

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDL 475
           +    V F+ L   + E     F   +   + +     +          R    +    +
Sbjct: 271 LSEAVVNFVALLGWSPESNQEIFTLDELIKQFDYRHISKSPAVFDMVKLRWMNGEYMKAM 330

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
           DFD F     P        +L L   +A         +P +
Sbjct: 331 DFDRFYEMAEPYIKAVIKKDLDL-KKIAAMVKTRIEVFPDI 370


>gi|163803709|ref|ZP_02197569.1| valyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172492|gb|EDP57357.1| valyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 957

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYQTWEEKGYFKPHGDTTQDSYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|160916068|ref|ZP_02078275.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
 gi|158431792|gb|EDP10081.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
          Length = 651

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 126/406 (31%), Gaps = 63/406 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D +A      GY+V  +   ++ G +I   A   
Sbjct: 12  TTAIAYTSGRP----HIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAKEA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ + N    + + +        +     D +     ++ E++   I K    Q  
Sbjct: 68  GITPKEFVDNIAGIVRKNF-------DMMNTSYDYFVRTTDDYHEKQVQKIFKKLYEQG- 119

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I +   + +     + F +E     G        +     + Y +      P+     
Sbjct: 120 -DIYKSTYEGMYCTPCESFWTESQLVDGKCPDCGRPVKKATEEAYFFNLQKYSPRLIEHI 178

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIY 354
           +   +  Q   R   + ++  +P             DL   +  ++ G       D+++Y
Sbjct: 179 ETHPEFIQPESRKNEMINNFLKP----------GLQDLCVSRTSFKWGIPVDFDPDHVVY 228

Query: 355 VM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           V                 G+    Y K   A    + +   + + +    + L   G P+
Sbjct: 229 VWIDALSNYITSLGFDVDGNHGENYKKYWPADVHIIGKDILRFHTIYWP-IMLMALGEPL 287

Query: 399 ---------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
                          KMSK  G+ I    +V   G D+VR+ +L     ++     +  +
Sbjct: 288 PKQVFGHPWLLVGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLM 347

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
            E+   +    +     R  S+  +          +  P +    E
Sbjct: 348 VERVNSDLANVLGNLVNRTISMQNKYFHGVISNPMEGDPLDAELIE 393


>gi|153805934|ref|ZP_01958602.1| hypothetical protein BACCAC_00174 [Bacteroides caccae ATCC 43185]
 gi|149130611|gb|EDM21817.1| hypothetical protein BACCAC_00174 [Bacteroides caccae ATCC 43185]
          Length = 505

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 95/292 (32%), Gaps = 28/292 (9%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A       ++    + I D  +     
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQ-----HDGDLIFRIEDTDSHRFVP 54

Query: 178 ALSVFWRYQQALYNN--DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               +            D  +  G   G Y +   +E+  KY   LL   +  ++     
Sbjct: 55  GAEEYILESFKWLGIHFDEGVSFGGEHGPYRQSERREIYKKYVEVLLENGK-AYIAFDTP 113

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             + A    I               S     R   +  ++ +D L  +G  Y        
Sbjct: 114 EELDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEP 165

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIY 354
           ++  +  D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I 
Sbjct: 166 NEDVRVNDLIRGEVIINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR 219

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             G +          +  A   +          L+         K+SKR GD
Sbjct: 220 --GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|134295511|ref|YP_001119246.1| valyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134138668|gb|ABO54411.1| valyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 955

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKEKSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            G+ T           D+A      +  + ++I
Sbjct: 212 SGTLTVATTRPETMLGDVAVMVHPEDERYAHLI 244


>gi|78049240|ref|YP_365415.1| valyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|90108448|sp|Q3BP98|SYV_XANC5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|78037670|emb|CAJ25415.1| valyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 980

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  GKG    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPS--GKGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGQTRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  ++    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAESG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|84500590|ref|ZP_00998839.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391543|gb|EAQ03875.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 855

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   +G+     + GK     +E     P+G +H+GH R   +GD +A     +G+
Sbjct: 12  KWQQAWDEAGVFRAERMPGKPKYYVLEMF-PYPSGRIHIGHVRNYTMGDVVARYKRATGH 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|237799868|ref|ZP_04588329.1| valyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022723|gb|EGI02780.1| valyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|227890503|ref|ZP_04008308.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867441|gb|EEJ74862.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 805

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 93/287 (32%), Gaps = 34/287 (11%)

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
             +Y +N  G     +  +   R  +     D  + +    G   K          +S+ 
Sbjct: 323 IADYVLNSYGTGAVMVVPAHDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDF 382

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           LN  +       KD ++ A+   + ++    K +N +   ++     + G+P P+    D
Sbjct: 383 LNGMD-------KDEAIDAINNWLEENGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWED 435

Query: 279 NLARQGYVYEGILPPPKSKTTQK----------CDMDRKQLLFRST-MVGDDVDRPLLKS 327
                  V E  LP    K T             ++D    +       G      + + 
Sbjct: 436 G--ETTLVPEDELPLYLPKATDIKPSGTGESPLANLDDWVNVVDENGRKGRRETNTMPQW 493

Query: 328 DGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSE 376
            GS  YF   +          ++ +       +YV G++H+     Y +        +  
Sbjct: 494 AGSSWYFLRYIDPHNNHEVADYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGV 553

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +          +       KMSK  G+ +    +V++ G+D++R
Sbjct: 554 VPTKEPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVEQYGADTLR 600


>gi|116251795|ref|YP_767633.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256443|emb|CAK07527.1| putative valyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 947

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ADAFRAGANARPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                   +   
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RRDMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  V ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSKAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 47/257 (18%)

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     P++  +++L        G +                 L   ST+   D    L 
Sbjct: 479 YLSHEGPMKAYVEDLLEN--FKPGEILTRDEDVLDTWFSS--ALWPFSTLGWPDETPELA 534

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +      Y+  ++         GFD +I+         V R+  +     + +    V  
Sbjct: 535 R------YYPTNV------LVTGFD-IIFFW-------VARMMMMGLHFMKDEDGEPVEP 574

Query: 386 CELVR---LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            + V    L RD    KMSK  G+ I    ++DE G+D++R             F    +
Sbjct: 575 FQTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIM 621

Query: 443 KEQSKE---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             Q ++   +P     Y   R           F +++      + +P+ +E   +   ++
Sbjct: 622 AAQGRDVKLDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-IL 677

Query: 500 VHLAEYPRVIENATIAQ 516
             LA   R +  A  A 
Sbjct: 678 TELARTERDVTEALEAF 694


>gi|86159149|ref|YP_465934.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775660|gb|ABC82497.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 858

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +G           T+  +E     P+G MH+GH R   +GD LA  +   G+
Sbjct: 41  RWQRRWEEAGAFKAGRRPDADTRYVLEMF-PYPSGAMHMGHARVYTIGDALARHLRMRGF 99

Query: 160 EV 161
           +V
Sbjct: 100 DV 101



 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G +H+     Y +    V   +    +   +  L+ + +    DG   KMSKR G+
Sbjct: 563 VYVGGPEHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGR--KMSKRWGN 620

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    +V   G+D+VR  ML+    E  D D+  
Sbjct: 621 VVAPGGMVSRFGADTVRMFMLFAAPPEK-DIDWSD 654


>gi|125972845|ref|YP_001036755.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125713070|gb|ABN51562.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 884

 Score = 45.3 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 73/273 (26%), Gaps = 42/273 (15%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P  +   L +  +    +   +  + T   I     N TG +H+GH     + 
Sbjct: 5   NIAKTYDPKQVEDRLYAEWMEKGYFHAEIDKEKTPFTIVIPPPNITGQLHMGHALDETLQ 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY     +      A I T A  V    ++ +   D              
Sbjct: 65  DILIRWKRMQGY--CTLWLPGTDHASIATEAKIVEAMAKEGITKEDI-------GREKFL 115

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
               E    Y                           I + LK L    D          
Sbjct: 116 ERAWEWKRHYGGR------------------------IVEQLKKLGCSCDWQRERFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVG-DDV 320
           G    + ++   L ++G ++ G            S +  + + + K   F        D 
Sbjct: 152 GLSRAVIEVFVRLYKKGLIHRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPVKDS 211

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           D  ++ +         D A      +  + ++I
Sbjct: 212 DEFVVVATTRPETMLGDTAVAVHPEDERYKHLI 244



 Score = 37.2 bits (85), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        + +      ++  +   +      + 
Sbjct: 471 TEDLKYFYPTDVLVTGYD-IIFFWVAR------MIFSALEHTGKEPFKYVFIHG----IV 519

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSK 447
           RD +  KMSK  G+ I    ++D+ G+D++RF + +       L F   K +    
Sbjct: 520 RDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 575


>gi|163731993|ref|ZP_02139439.1| glutamyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161394291|gb|EDQ18614.1| glutamyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 466

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 90/290 (31%), Gaps = 43/290 (14%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G +        D          ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRARSTPEATQAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                   ++D ++   +        V  +L          F  ++ +   ++ +     
Sbjct: 61  DGMAWLGLDHDGEIVSQFDNAERHAAVAMDLLA-AGKAYKCFATQEEISAFREAARAE-- 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII-DNLARQGYVYEGILPPPKSKTTQK 301
                                  +R   SP RD+  D      YV    +  P++  T  
Sbjct: 118 ------------------GRSTLYR---SPWRDVAPDEHPDAPYVVR--IKAPQNGETII 154

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 155 HDQVQGDVNIRNDQLD---DMVLLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+        V +   + L       K+SKR G      
Sbjct: 207 NNAARQMMIYNALGWD-----VPVWAHIPLIHGPDGKKLSKRHGALGAQE 251


>gi|115377905|ref|ZP_01465090.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115365065|gb|EAU64115.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 865

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    +G+       G   K  +E +   P+G MH+GH R  ++GD  A      GY
Sbjct: 48  KWQTRWEEAGVFRAGMRPGAPKKYILEML-PYPSGKMHMGHVRNYLIGDVYARYFQMKGY 106

Query: 160 EV 161
           +V
Sbjct: 107 DV 108



 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G +H+     Y +    V   +        V       +       KMSKR G+ +
Sbjct: 576 VYVGGPEHAVMHLLYFRFWTRVMKELGLSPVDEPVKRLVTQGIVNGSDGRKMSKRWGNVV 635

Query: 409 TLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQS 446
               +V + G+D+ R ++M         DFD+   + + 
Sbjct: 636 APATIVKKYGADTARAYVMFAGPPER--DFDWSDAQVEG 672


>gi|30350185|gb|AAP31493.1| putative valyl-tRNA synthetase [Western X phytoplasma]
          Length = 860

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 37/200 (18%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  L      K  +  +  G    +N   K     +     N TG +H+GH     + D 
Sbjct: 6   NFKL---VENKRYAKWLEKGYFKTQNNPDKTPFTIV-IPPPNITGKLHLGHAWNNTLQDI 61

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +       G++V   +        ++   ++   + +Q L             G   +++
Sbjct: 62  IIRRKKMLGFDVL--FLPG-----MDHAGIATQSKIKQKLKEE----------GFAEQNL 104

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            KEL  KY+             + KD       K I    + L++  D    +    +  
Sbjct: 105 TKELFLKYA------------ALWKD----EYTKNIHTQWERLSLHLDYDYEKFTLDKDF 148

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              +  +   L  +  +Y  
Sbjct: 149 SQVVEKVFIQLYDKKLIYRD 168


>gi|82703767|ref|YP_413333.1| isoleucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411832|gb|ABB75941.1| Isoleucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 943

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 91/279 (32%), Gaps = 42/279 (15%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD----MDRKQLLFRSTMVGDD 319
           + H      +  +   + ++G      L   +    +  D     D   + F S    D 
Sbjct: 502 ELHPRTSELLEQVAQRVEQEGIEAWFRLDAKELLGEEAKDYKKLTDTLDVWFDSGTTHD- 560

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
               +LK D    Y A                 +Y+ GSD   G+ +       A+  + 
Sbjct: 561 ---TVLKPDPQLKYPAD----------------LYLEGSDQHRGWFQSSLLTGCAIDGRA 601

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ I  + V+D  G+D +R  +     S  L   
Sbjct: 602 PYDALLTHGFVV---DGHGHKMSKSRGNVIAPQKVMDTSGADILRLWVGSTDYSGELSIS 658

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
              +K   +         +Y R R+  R       D D        I Q  E D   L  
Sbjct: 659 DEILKRVVE---------SYRRIRNTLRFLLANLADFDSSTDAVP-IEQWLEIDRYILAF 708

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
              L +  +V+E+     + + +   L++  S    G +
Sbjct: 709 TRRLQD--KVVED-YCNFDFHLIVHRLHNFCSEDLGGFY 744


>gi|120553891|ref|YP_958242.1| valyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323740|gb|ABM18055.1| valyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 950

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 62/213 (29%), Gaps = 34/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +       S   +  +  G+G   +I     N TG +H+GH     + DTL    
Sbjct: 7   PENIERQWYENWESKGYFRPS--GEGDSYSIAIPPPNVTGSLHMGHAFQHTIMDTLTRFK 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + AG     +                               V ++LA
Sbjct: 65  RMQGRNALWTVGTDHAGIATQMV-------------------------------VERKLA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +      +   E+++  + D+   +   I R  ++ L    D          G    ++
Sbjct: 94  AEEDKTRHDLGREEFIKRIWDWKEHSGGTITRQ-MRRLGNSVDWSNERFTMDDGFYKAVQ 152

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L  +G VY G               D +
Sbjct: 153 EVFIRLYDEGLVYRGKRLVNWDPKLHTAISDLE 185


>gi|125809585|ref|XP_001361180.1| GA17927 [Drosophila pseudoobscura pseudoobscura]
 gi|54636354|gb|EAL25757.1| GA17927 [Drosophila pseudoobscura pseudoobscura]
          Length = 1048

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 59/210 (28%), Gaps = 33/210 (15%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+  K        G +   +    G  V I     N TG +H+GH     + D +     
Sbjct: 104 SWWEKQGFFTPEYGRDSIDSPNPNGKFVMI-IPPPNVTGSLHLGHALTNAIEDAITRYHR 162

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG     +   + WR +Q                            
Sbjct: 163 MKGRTTLWVPGCDHAGIATQVVVEKLLWRDEQL--------------------------- 195

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                  +   +K++  + D+  +   + I D LK+L   +D               + +
Sbjct: 196 ----SRHDLGRDKFIERIWDWRREKGGR-IYDQLKSLGSSYDWSRVNFTMDPKLCRAVTE 250

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L  +G +Y        S T +    D
Sbjct: 251 AFVRLHEEGSIYRSSRLVNWSCTLRSAISD 280


>gi|196228014|ref|ZP_03126881.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227417|gb|EDY21920.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 545

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 125/397 (31%), Gaps = 56/397 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I++ +  P    H+GH    V+ D LA      G +V     ++  G ++   A   
Sbjct: 8   TTAIDYTNGAP----HIGHAYEKVLADVLARFHRLKGEDVFFLTGVDQHGQKVQQSAEKQ 63

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQA 240
               QQ +    +     +              D K+   +    +  W    +D   + 
Sbjct: 64  SVEPQQFVDGITAKFLALWKKLEVEYDGWAATTDPKHKQCVRAILQRLWDDKGEDGQSKW 123

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE---------GIL 291
           + K       ++  +  +   E     G+  P    ++    + + +           ++
Sbjct: 124 LYKKSAGGYYSVRQEQFLTDKERG-PDGEFGPEWGQVEFREEENFYFRLLPHKQWLLDLI 182

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD---------------GSYTYFAA 336
                        D +    R+ +   + D  + + D               G  T+   
Sbjct: 183 DARSKAGQPLVVPDFRVAELRNAVEKLEGDLCISRPDTRLKWGIPFPESFGAGFVTFVWF 242

Query: 337 DLAYFKCKYERGFD---------------NMIYVMGSD-----HSGYVKRLEAVAAAVSE 376
           D       +   +D               N+++V+G D     H  Y      +  A+  
Sbjct: 243 DALVNYISFAPDYDPTAARPSEKFLQYWRNIVHVIGKDILIPAHGVY---WPIMLKAIGF 299

Query: 377 KKAQINVLLCE--LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-E 433
              +I  LL         + G   KMSK  G+ +    + D+ G+++VR+ ++    + +
Sbjct: 300 ADEEIPTLLVHGWWNIKGKGGESEKMSKTLGNVVDPDLLADKYGAEAVRYYLMSDIATGK 359

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
             DF   ++ ++   +    +     R  ++  + ++
Sbjct: 360 DSDFSEERLIQRFNTDLANSLGNLLNRTLNMVAKYRE 396


>gi|319936886|ref|ZP_08011297.1| TransferRNA-Gln synthetase [Coprobacillus sp. 29_1]
 gi|319807985|gb|EFW04560.1| TransferRNA-Gln synthetase [Coprobacillus sp. 29_1]
          Length = 478

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 95/292 (32%), Gaps = 47/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L                  +Q+  L  
Sbjct: 9   APSPTGHLHIGGARTALFNYLFAKHHGGDFIFRLED----TDIERNIEGGEASQLENLEW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L        Y +    ++  KY+  LL           K Y+ +
Sbjct: 65  L-------GIIPDESPLKPVEKYAPYRQMERLDIYKKYTDILLE----------KGYAYK 107

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                  ++L A + +         ++R       + +      G  Y   +  P  KT 
Sbjct: 108 CFCT--SEELDAEHEKQVAAGVAPKYNRKCCDLTAEEVKAKEDAGMPYTIRVKVPAGKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
           +  DM R  + F S  +GD     L+K++G  TY      Y     +   D + +V  G 
Sbjct: 166 EFEDMIRGHVSFESEDIGDW---VLVKANGIPTYN-----YAVVIDDHSMD-ITHVFRGE 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +H     +   +   +  +      +      L  +    K+SKR    +  
Sbjct: 217 EHLSNTPKQLMIYEMLGWEAPTYGHM-----TLIVNEDRKKLSKRDESIMQF 263


>gi|331265567|ref|YP_004325197.1| Glutamyl-tRNA synthetase (glutamate-tRNA ligase) [Streptococcus
           oralis Uo5]
 gi|326682239|emb|CBY99856.1| Glutamyl-tRNA synthetase (glutamate-tRNA ligase) [Streptococcus
           oralis Uo5]
          Length = 486

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 96/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    +L  KY  +LL   E K           
Sbjct: 57  RSQLENLRWLGIDWDESPETH--SNYRQSERLDLYQKYIDQLL--AEGKAYKSYVTEEEL 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  ++         + ++        +   +  I +     G +    L   +S   
Sbjct: 113 AAERERQEAAGETPRYINEYLGMS-----EEEKVAYIAER-EAAGIIPTVRLAVNESGIY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           Q  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G D
Sbjct: 167 QWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHDMQISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|303327269|ref|ZP_07357711.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863257|gb|EFL86189.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 837

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +   +       +         K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPQAIEEKWQARWRKENAFSSTHESDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RCKRMQGFNV 74


>gi|240170920|ref|ZP_04749579.1| valyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 886

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPGAMEGAIYQKWLDAGYFTADPTSSKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  K +  + 
Sbjct: 77  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEKQLAVD- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDFGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   Q    D +
Sbjct: 164 RTIFKRLYDAGLIYQAERLVNWSPVLQTAISDLE 197



 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 63/207 (30%), Gaps = 34/207 (16%)

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSE 433
             +  Q+      L  L RD    KMSK  G+ I     +D  G+D++RF +        
Sbjct: 516 GRRGPQVPFTDVFLHGLIRDEFGRKMSKSKGNVIDPLEWMDTFGADALRFTLARGASPGG 575

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            L      V+                        A                +P  +E   
Sbjct: 576 DLAIGEDAVRASRNFTTK-------------LFNATRYALLNGATKPSEAPLPAPAELTD 622

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANN 552
           ++  ++  L E    +++A  + E  +    LY  A   F   +                
Sbjct: 623 ADRWILGRLEEVRAEVDSAFDSYEFSRACEALYHFAWDEFCDWY---------------- 666

Query: 553 RKLTMMRLQ--LVHAVASIINSGLNII 577
            +L   +L   L H  A ++ + L+ +
Sbjct: 667 VELAKTQLAEGLSHTTA-VLAAALDTL 692


>gi|73972165|ref|XP_532063.2| PREDICTED: similar to valyl-tRNA synthetase 2-like [Canis
           familiaris]
          Length = 1077

 Score = 45.3 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 56/214 (26%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 123 YVEAAWYSWWVREGFFKPEYQTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 182

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 183 RWHRMRG---------------------------DQVLWIPGSDHAGIATQAVVEK---- 211

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          EK+L  V  +  +     I + L+AL    D          G   
Sbjct: 212 QLWKERGMRRHELSREKFLREVWKWKDEKG-GEISEQLQALGASLDWDRECFTMDAGFSV 270

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 271 AVTEAFVRLYEAGLLYRSQQLVNWSCTLRSAISD 304


>gi|332876725|ref|ZP_08444483.1| isoleucine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332685284|gb|EGJ58123.1| isoleucine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 1140

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 19/166 (11%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A++  V +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 648 GVDQTRGWFFTLHAISTMVFDSVAYKAVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 704

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQ-YAYARCRSIFRQAKDIFP 473
           + GSD+VR+ M+   +  + L FD   V+E S+       Q Y++         A     
Sbjct: 705 QYGSDAVRWYMITNSSPWDNLKFDEAGVQEVSRTFFGKLFQTYSFLTMY-----ANVDGW 759

Query: 474 DLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEP 518
                  P +  P+   +  SEL  L+ +       ++      EP
Sbjct: 760 HYAETDVPMSERPEIDRWILSELNTLVKN-------VDACYEDYEP 798


>gi|319408565|emb|CBI82218.1| Methionyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 519

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 99/325 (30%), Gaps = 35/325 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D+LA      G +V      ++ G ++   A ++    QQ    
Sbjct: 14  PNGAPHIGHAYNAIASDSLARFQRLDGKDVFFLSGTDEHGLKMQQAAEALNITPQQLADR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           N +   +           +++   +       +          + + +     ++ +   
Sbjct: 74  NSAIFQKMLTKLNCSNDDFIRTTEERHHRTCQAIWKKMEANGDIYLDRYAGWYSVRQESY 133

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
            + K   I  D             +  E+ +        + ++++  +            
Sbjct: 134 YEEKDTQIGEDGIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEKYPDFIAPNERRN 193

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +        +   + R    +   +  +      +  D    Y  A   + +   +R F
Sbjct: 194 EIISFIKSGLKDISISRTNFNWGVGVPNNSKHVMYVWVDALTNYLTAIDFFNEISKKRHF 253

Query: 350 -DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                +++G D    H+ Y     A   +   +  +       L+         KMSK  
Sbjct: 254 WSASTHIIGKDIIRFHAIY---WPAFLMSAGIELPKRIFAHGFLLN-----RGAKMSKSV 305

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +    ++D  G D VR+  L  
Sbjct: 306 GNVVDPFEIIDRYGLDQVRYFFLRE 330


>gi|188997245|ref|YP_001931496.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932312|gb|ACD66942.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 977

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 61/216 (28%), Gaps = 36/216 (16%)

Query: 95  PSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             Y  + + +         EY +   GK    ++     N TG +H+GH     + D + 
Sbjct: 3   KEYNHQEIENKWADIYKNSEYFKAQTGKKPYFSVVMPPPNVTGSLHIGHALNVTLQDIMV 62

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY V             +   ++  W   + L                      
Sbjct: 63  RYKRMQGYNVL-------WLPGFDHAGIATQWVVVRELQ--------------------- 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               K      +   E+++  V  +  ++    I++ L  +    D          G   
Sbjct: 95  ----KEGISRFDLGRERFIEKVWQWVPKS-RDSIKNQLIRIGASCDWSRQRFTLDEGFSR 149

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R    NL ++G +++           +    D +
Sbjct: 150 AVRYAFVNLYKEGLIFKAPYIVNWDPKEKTAISDLE 185



 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 50/241 (20%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    +      +V +  LV   RD    KMSK  G+
Sbjct: 577 TGFD-IIFFW-------VARMIMMGTKFTNDVPFKDVYIHALV---RDEKGEKMSKTKGN 625

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    + ++ GSD++RF +           D    +++ +        Y +   +    
Sbjct: 626 VIDPLEMAEKYGSDALRFTLASLAAQGR---DIRLSEKRIEG-------YKHFSNKI--- 672

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-- 524
                F  ++ + +      +       +  ++  L +    IE++T   E      Y  
Sbjct: 673 WNASKFVLINSEDYDGKTNLESLSLSIEDYWILTKLNK---TIESSTKELE-----NYRY 724

Query: 525 ------LYDLASVF--HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
                 LYD    F  H +     E  + R  + ++ +       L      ++   L +
Sbjct: 725 NEYANILYD----FFWHDYCDWYIELSKERIYKGSSEEKKTALTVLNF----VLRESLKL 776

Query: 577 I 577
           +
Sbjct: 777 L 777


>gi|58040911|ref|YP_192875.1| valyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81818999|sp|Q5FN28|SYV_GLUOX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58003325|gb|AAW62219.1| Valyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 888

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 70/267 (26%), Gaps = 43/267 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+     L         +  +    G   +I F   N TG +H+GH    V+ D L    
Sbjct: 8   PADHENALYDAWEKSGAFRAHPDQPGEPFSIMFPPPNVTGTLHLGHSLNFVLQDMLIRWK 67

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+ V  +   + AG     +                                     
Sbjct: 68  RQEGFNVLWQPGTDHAGIATQMVVERAL-------------------------------- 95

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           DK  +       E +L  V D+  Q     I   L+ L    D          G    +R
Sbjct: 96  DKEGTSRTALGREGFLERVWDWK-QEYGGTIVKQLRKLGASADWERERFTMDDGLSRAVR 154

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLFRSTMVGDDVDRPLLK 326
            +   L  +G +Y            +    D        +  + +       +  R +  
Sbjct: 155 KVFVTLYNEGLIYRDRRLVNWDPKFRSAISDLEVENHETKGSMWY--IRYPLEDGRTITV 212

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D+A      +  + +MI
Sbjct: 213 ATTRPETMLGDVAVAVHPEDERYADMI 239


>gi|85712423|ref|ZP_01043472.1| glutamyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693701|gb|EAQ31650.1| glutamyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 469

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 90/285 (31%), Gaps = 45/285 (15%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +HVG  R A+    +A      G E        D          ++  
Sbjct: 3   VVTRFAPSPTGYLHVGGARTALYSWLVA---KAQGGEFVLRIEDTDRERSTQPAIDAILE 59

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +         L   +  G Y +    +   +   +LL           K Y     ++
Sbjct: 60  GME--------WLGLNWDRGPYYQTKRFDRYKELVDQLLEED-----KAYKCYCSTERLE 106

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKTTQKC 302
            +R               E+   RG+         DN    G  Y      P+  +    
Sbjct: 107 KMR---------------EEQMERGEKPRYDGHCRDNPNASGDSYVIRFRNPQEGSVIFD 151

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R ++ F +  +    D  + +SDG+ TY   +       +E G  ++  V G DH  
Sbjct: 152 DLIRGRIEFSNQELD---DLIIARSDGTPTY---NFCVVVDDWEMGITHV--VRGEDHIN 203

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              R   +  A++       V     V +       K+SKR G  
Sbjct: 204 NTPRQINILKALNAP-----VPYYAHVSMILGDDGKKLSKRHGAV 243


>gi|290512177|ref|ZP_06551544.1| valyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289775172|gb|EFD83173.1| valyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|288937436|ref|YP_003441495.1| valyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288892145|gb|ADC60463.1| valyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|182678393|ref|YP_001832539.1| glutamyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|238691243|sp|B2IKL1|SYE1_BEII9 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|182634276|gb|ACB95050.1| glutamyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 473

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 88/306 (28%), Gaps = 62/306 (20%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTL 177
            +   + +PTG +H+G  R A+     A       L+     +  R        A I  +
Sbjct: 5   VVTRFAPSPTGFLHIGGARTALFNWLFARHAGGRMLLRIEDTDRERS-----TDAAIAAI 59

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              + W       +                 + +     Y        EE      K+  
Sbjct: 60  LDGLSWLGLHWDGDVIYQFQRVARHRDVALSLLEAGQAYYCYATPQELEEMREQARKEGR 119

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                   RD  +                   PS ++ +I  L            P   +
Sbjct: 120 PPRYDGRWRDRAE----------------NDAPSGVKPVI-RLKA----------PRDGE 152

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT    +  K          D  D  LL+SDG+ TY    LA     ++ G   +I   G
Sbjct: 153 TTLDDKVQGKVTW----ANKDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQIIR--G 203

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     R   +  A+       +V +   + L       K+SKR G           +
Sbjct: 204 DDHLTNAARQMQIYQALGW-----SVPIMAHIPLIHGADGAKLSKRHG----------AL 248

Query: 418 GSDSVR 423
           G D+ R
Sbjct: 249 GVDAYR 254


>gi|166365576|ref|YP_001657849.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082070|sp|B0JJL5|SYC_MICAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166087949|dbj|BAG02657.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 480

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 105/322 (32%), Gaps = 48/322 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  VV D +   + + GY+V                      RY Q   + D  +
Sbjct: 38  HLGHARTCVVWDVVRRYLEYLGYKV----------------------RYIQNFTDIDDKI 75

Query: 197 PEGYYPG-VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                     +  V +   + Y  ++            +       +K +  +L+     
Sbjct: 76  LNRAKNEHTTMAAVAERFIEAYFEDMAKLGVRPADAYPRATHTLDGIKRLVYELEQKGYA 135

Query: 256 H----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +    D++ S   F        R  +D+L        G +     +  +K D     L  
Sbjct: 136 YPSDGDVYYSVRRFSDYGKLSGRK-LDDLQAGA---SGRVETDDPEAIKKQDPFDFALWK 191

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKR 366
            +       D P     G   +     A  K +     D  I+V GSD     H   + +
Sbjct: 192 GAKSGEPSWDSPW--GQGRPGWHIECSAMVKEQLGETID--IHVGGSDLIFPHHENEIAQ 247

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            EA        K   +  L   +         KMSK  G+FIT+R ++ +    +VR ++
Sbjct: 248 SEAA-----TGKPLAHYWLHNGMVKV---AGEKMSKSLGNFITIRELLAKYDPLAVRLLI 299

Query: 427 LWRKNSELLDFDFCKVKEQSKE 448
           L  +  + +DF    ++  +  
Sbjct: 300 LGAQYRKPIDFSDEGLQAATNG 321


>gi|156740344|ref|YP_001430473.1| isoleucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231672|gb|ABU56455.1| isoleucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 1079

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 15/214 (7%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + ++ A  NV+    +    D    KMSK  G+ +    V++E 
Sbjct: 562 DQTRGWFYTLHAISTLLFDRPAFKNVICLGHI---LDAEGQKMSKSRGNVVDPWTVMNEH 618

Query: 418 GSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ-YAYARCRSIFRQAKDIFPDL 475
           G+D++R ++           F    V E  ++  +     YA+    +           +
Sbjct: 619 GADALRWYLFTAAPPGSPRRFSAGLVAESLRKFLLTLWNTYAFFATYANLDGWTPTKDGV 678

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535
           D  L P  ++P +         L   L    R + +A  A +    A  + D        
Sbjct: 679 DQHLDPATLVPIDR------WALAR-LNSLVRTVTDAFEAYDVTTAARAIEDFVDELSNW 731

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
           +   R N R  +   ++R        L   + ++
Sbjct: 732 Y--VRRNRRRFWKSEHDRDKQAAYATLYTCLLTV 763


>gi|186476349|ref|YP_001857819.1| valyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184192808|gb|ACC70773.1| valyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 957

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 45/231 (19%)

Query: 92  YLSPSYLRKILSSIV---VSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVG 147
            L+ S+  + + +          Y    +  G K  +I+    N TG +H+GH     + 
Sbjct: 7   TLAKSFEPQTIEAQWGPEWEKRGYAAPTMEPGRKNFSIQLPPPNVTGTLHMGHAFNQTIM 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 67  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 94

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  Q+    I   ++ L    D          
Sbjct: 95  IVVERQLDAQGVSRHDLGREKFVERVWEWKQQSG-STITGQVRRLGASIDWSREYFTMDD 153

Query: 268 GDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +RD+   L  QG +Y G        +L    S      + +   L 
Sbjct: 154 KMSAAVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGSLW 204


>gi|331002010|ref|ZP_08325530.1| glutamyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411806|gb|EGG91211.1| glutamyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 483

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 112/299 (37%), Gaps = 50/299 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E Y+         + +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEGGDFLLRI-----EDTDQERYVE------GAIDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G   G Y++   ++  L  +Y+ +L+   ++ +        
Sbjct: 58  IYRTLEKTGLIHDEGPDKDGG-VGPYVQSERQKQGLYLEYAKKLIEK-KQAYYCFCTPER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + ++   +  +      +H + +SE++            I      G  Y      P + 
Sbjct: 116 LNSLRSNVNGEEIMKYDKHCLSLSEEE------------IKEKLESGIPYVIRQNNPTTG 163

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT   D     +   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G
Sbjct: 164 TTSFHDDIYGDITVDNSELD---DMVLIKSDGYPTY---NFANVVDDHLMGITHV--VRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +++     +   +  A   +      + C L+    +    K+SKR+G   +   + ++
Sbjct: 216 NEYLSSSPKYNRLYEAFGWEVP--TYVHCPLIT---NEEHKKLSKRSGHS-SFEDLTEQ 268


>gi|330016474|ref|ZP_08308447.1| valine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328528835|gb|EGF55778.1| valine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|300173823|ref|YP_003772989.1| methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888202|emb|CBL92170.1| Methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 703

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 102/339 (30%), Gaps = 58/339 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V+ D  A      G +V      ++ G +I         +  +A   
Sbjct: 48  PSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKI--------QQKAKAEGI 99

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
            + +  +G   G+       +L D    + +   EE+    V+      +    I + + 
Sbjct: 100 PEINYLDGMAKGIKDL---WQLMDISYDDFIRTTEERHEKAVQKIFTTLLENGDIYKGEY 156

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +    +  + + +E           RD  D +   G    G       +      M +  
Sbjct: 157 EGWYSVSDEEYFTESQL----AEVYRDADDKMIG-GKAPSGHDVELVKEEAYFFKMSKYA 211

Query: 309 LLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM- 356
                             R     +        DLA  +   + G        ++IYV  
Sbjct: 212 DWLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGISVPGDEKHVIYVWI 271

Query: 357 ------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--------- 394
                        S+++   ++   A    V ++  + + +   ++              
Sbjct: 272 DALSNYITALGYDSENTDLFEKFWPANVQLVGKEIVRFHTIYWPIMLHALGIELPKSVIG 331

Query: 395 -----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                    KMSK  G+ I    + +  G D+VR+ +L 
Sbjct: 332 HGWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLR 370


>gi|237747567|ref|ZP_04578047.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229378929|gb|EEO29020.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 968

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 86/252 (34%), Gaps = 28/252 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-------GSY 331
              G ++  +L   +   K  +K  ++  Q L    ++GD+ D+     D          
Sbjct: 516 KETGELHPRMLELLEEIAKRVEKEGIEAWQTLDPKELLGDEADQYEKNKDTLDVWFDSGA 575

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+          +     D  +Y+ GSD   G+       ++ +        +L    V 
Sbjct: 576 THLTVLRGSHAKELRFPAD--LYLEGSDQHRGWFHSSLLTSSMLDGCPPYKMLLTHGFVV 633

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V D +G+D +R  +     S  L      +K  ++   
Sbjct: 634 ---DGEGKKMSKSMGNVIAPQKVSDTLGADILRLWVAATDYSGELSISDEILKRVTE--- 687

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R       D D        I +  E D   L  +  L +   V+ 
Sbjct: 688 ------AYRRIRNTLRFLLSNTADFDPA-KDAVAIDELLEIDRYALASMKSLQD--EVMA 738

Query: 511 NATIAQEPYKLA 522
           +     E + + 
Sbjct: 739 H-YEKFEFHPIV 749


>gi|227501070|ref|ZP_03931119.1| glutamate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216843|gb|EEI82241.1| glutamate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 493

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 108/303 (35%), Gaps = 49/303 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  R  ++  A   +  L  
Sbjct: 9   APSPTGYLHIGGLRTALFNYLYARHTGGDMLLRI-----EDTDRTRFVEGA---LENLLK 60

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIV 233
           ++ W      +  + + + ++ E    G Y++    E  + +KY  +L+   +  +    
Sbjct: 61  ALKWAGIEIDEGVMLDENGEVTERGDCGPYIQSERVEKGIYNKYIDQLIEEGK-AYYCFC 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  +    R D   L  ++D              P+ +    +A  G  +   L  
Sbjct: 120 SQERIDKVRDQQRAD--GLTPKYDGLCR--------SLPLEEAKKRVAA-GEPHTVRLKL 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P ++     D  + ++ F +    D  D+ L+K DG  TY     A     +  G  ++ 
Sbjct: 169 PVNRDITFNDRIKGKITFNTD---DQDDQVLIKRDGFPTYHF---AVVVDDHLMGITHV- 221

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G +      +   +  A   +  +        +    +    K SKR GD + +   
Sbjct: 222 -VRGDEWVSSTPKHVYLYEAFGWQAPEYIH-----LPTVLNKDHKKYSKRNGDGM-VEDF 274

Query: 414 VDE 416
           ++E
Sbjct: 275 IEE 277


>gi|237807328|ref|YP_002891768.1| valyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499589|gb|ACQ92182.1| valyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 950

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + +     S   +  +         I     N TG +H+GH     + D L 
Sbjct: 4   TFNPNAIEQAMYQHWESQGYFKPSGDSSNGNYCIVIPPPNVTGSLHMGHAFQQTIMDALI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMLGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D              
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWQWKEESGGTITRQ-MRRLAASVDWDREAFTMDPALSH 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  Q  +Y G               D +
Sbjct: 152 AVQEVFVRLYEQDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|119482125|ref|XP_001261091.1| glutamyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119409245|gb|EAW19194.1| glutamyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 624

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 110/293 (37%), Gaps = 49/293 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+    LA      G  + R   I D   Q  T+  +    Y+  
Sbjct: 49  APSPTGYLHLGSLRTALFNYLLAK--RTGGQFLLR---IEDT-DQKRTIPGAEQRLYEDL 102

Query: 188 ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
               L  ++  L  G Y G Y +     +  +++++L+        F   + L  +  + 
Sbjct: 103 QWAGLQWDEGPLVGGPY-GPYRQSERTAIYREHANQLVKNGHAYRCFCSTERLDSLARHR 161

Query: 238 VQAMM-KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPK 295
            QA +          ++ +     SED   +G+   +R     L  +GY +++ ++    
Sbjct: 162 SQAGLPPGYDRQCADISAE----ESEDRAAKGEAHVVR-----LKVEGYPMFDDLVYGKT 212

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +      +D  + ++         D  LLKSDG  TY  A++       +     + +V
Sbjct: 213 GQNRPNSKLDLIERVYD--------DPILLKSDGHPTYHLANV------VDDHCMKITHV 258

Query: 356 M-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           + G++         A+  A +    +        V L  D    K+SKR  D 
Sbjct: 259 IRGTEWMPSTPMHVALYHAFNWTPPRFGH-----VPLLVDKSGQKLSKRNADI 306


>gi|51891504|ref|YP_074195.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826240|sp|Q67SJ2|SYV_SYMTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51855193|dbj|BAD39351.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 911

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 53/199 (26%), Gaps = 32/199 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
                 +        + G  Y   ++       I     N TG +H+GH     + D L 
Sbjct: 15  RYDAKLVEDEYYQYWMDGGFYRAPIVEGKQPYTIVIPPPNVTGTLHLGHALNNTMIDILI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+        + AG       L+   R ++ L  +                   
Sbjct: 75  RWKRMQGHPTLYLPGTDHAG-------LATQIRVEEDLRKSGGPT--------------- 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E ++  V D+  +     I   L+ L +  D              
Sbjct: 113 ---------RHELGREAFVAKVWDWK-ERYHATITSQLRKLGVSVDWSREAFTMDERLSR 162

Query: 272 PIRDIIDNLARQGYVYEGI 290
            +R     L ++G +Y+G 
Sbjct: 163 AVRAFFVQLYKKGLIYQGT 181


>gi|293393096|ref|ZP_06637411.1| valine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424242|gb|EFE97456.1| valine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 958

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + + L     S   +  N         I     N TG +H+GH     + DT+   
Sbjct: 13  DPSQIEQKLYDHWESQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 73  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  + ++  +  +  ++   I R  ++ L    D          G  + +
Sbjct: 102 AAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSNAV 160

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          +    D +
Sbjct: 161 KEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 194


>gi|289423583|ref|ZP_06425384.1| glutamate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156085|gb|EFD04749.1| glutamate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 547

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 135/404 (33%), Gaps = 65/404 (16%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            +PTG +H+G+   A+V + +A L    G    R   I D   +                
Sbjct: 40  PSPTGFIHLGNLYGALVDERIAHL--SGGPMFLR---IEDTDDKRKVEGAEELIINSLKF 94

Query: 190 YNNDSD--LPEGYYPGVY-------LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +  + D  +    Y G Y        K + +  A   + +   +P          +  + 
Sbjct: 95  FGIEFDEGVTIDGYKGEYGPYTQSMRKEIYQTAAKFLTEKGCAYP---------SFVTEE 145

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTT 299
            M  IR++ +   +    +        G+ +  RD+ +D +  +  +  G+    + K+T
Sbjct: 146 EMAQIREEQEKAGVNPGYY--------GEWAKDRDLTLDEIKAK--LDAGMPWTLRLKST 195

Query: 300 QKCDMDRKQLLFRSTMVGD------DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
              ++    + F+  + G+      ++D  +LK++G  TY  A +       +  F  + 
Sbjct: 196 GDPEV---AMKFKDGIRGEINVRQNNLDVVVLKNNGIPTYHFAHV------VDDHFMRVT 246

Query: 354 YVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            V+ G +    +     +   +  ++   N      +    DG   K+SKR    ++L +
Sbjct: 247 DVVRGEEWLSTLPIHLELFFQMGWRRPNYNHTAH--LMKTEDGKKRKLSKRKDPELSLEY 304

Query: 413 VVDE--VGSDSVRFMML----------WRKNSELLDFDFCKVKEQSKENPVFYV-QYAYA 459
            + +         ++M            +   +       K K  S    +F + +    
Sbjct: 305 YMRDGYFPQAVTEYLMTLMNSNYEEWRMKNPDKSYAEFPFKAKNMSSSGALFDLNKLNDI 364

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
               + R +++       D   +              +LI  LA
Sbjct: 365 SKDVLVRLSEEEILKFMLDWSNKFDQKAHDLLTKYYDELIKLLA 408


>gi|238892747|ref|YP_002917481.1| valyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545063|dbj|BAH61414.1| valyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|206577001|ref|YP_002240781.1| valyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206566059|gb|ACI07835.1| valyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 951

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|195154941|ref|XP_002018371.1| GL16801 [Drosophila persimilis]
 gi|194114167|gb|EDW36210.1| GL16801 [Drosophila persimilis]
          Length = 1048

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 59/210 (28%), Gaps = 33/210 (15%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+  K        G +   +    G  V I     N TG +H+GH     + D +     
Sbjct: 104 SWWEKQGFFTPEYGRDSIDSPNPNGKFVMI-IPPPNVTGSLHLGHALTNAIEDAITRYHR 162

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG     +   + WR +Q                            
Sbjct: 163 MKGRTTLWVPGCDHAGIATQVVVEKLLWRDEQL--------------------------- 195

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                  +   +K++  + D+  +   + I D LK+L   +D               + +
Sbjct: 196 ----SRHDLGRDKFIERIWDWRREKGGR-IYDQLKSLGSSYDWSRVNFTMDPKLCRAVTE 250

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L  +G +Y        S T +    D
Sbjct: 251 AFVRLHEEGSIYRSSRLVNWSCTLRSAISD 280


>gi|159905012|ref|YP_001548674.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886505|gb|ABX01442.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 663

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 50/367 (13%), Positives = 107/367 (29%), Gaps = 57/367 (15%)

Query: 133 TGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LSVFWR 184
            GP+H+GH R   +  D     +   G EV      ++ G  I   A       + +  R
Sbjct: 13  NGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAEREGVKPIDIVDR 72

Query: 185 YQQALYNND--------------------------SDLPEGYYPGVYLKHVGKELADKYS 218
           Y  A+  +                           S L E  Y  +Y K + +   +K  
Sbjct: 73  YHNAIKADLDSLNVSFDTFGRTHSDIHIKTAQEFYSKLKENGY--IYEKEIEQFYCEKCD 130

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF--------ISEDDFHRGDP 270
             L +   E   P  +  +     ++    L+   + +           I     +    
Sbjct: 131 MYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKRTTHYFFKL 190

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQ---KCDMDRKQLLFRSTMVGDDVDR-PLLK 326
           S ++D++             +     +  +     D+ R           DD      ++
Sbjct: 191 SAMQDVLKEYIENSPEMPEHVKNMALRWIEELHDWDVSRNIKWGVPIPGCDDQVMYVWIE 250

Query: 327 SDGSYTYFAA---DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQIN 382
           +   Y  F     D+             + + +G D + +       +   +   K    
Sbjct: 251 APIGYVSFTKQLGDVWKSYWLENTDNSKISHFIGKDITVHHAVFWPGILKGIGGYKMPNA 310

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
           V+    + L       KMS      + ++  ++   SD +R+  +     +   DF +  
Sbjct: 311 VVSGGYLTL----ENKKMSTSKNWVVWVKDFIENFSSDYLRYFFMINAPLNRDTDFSWDD 366

Query: 442 VKEQSKE 448
            +++   
Sbjct: 367 FQKRINT 373


>gi|110803500|ref|YP_699779.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684001|gb|ABG87371.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 514

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L DK   Y  E   F  +K  
Sbjct: 70  NKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYDKGFIYEKETEEFYCQKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ V+  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGVEDGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                      K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLDGGLRDKIVTREINWGIEVPVEGFEDKRVYVWIDALLAYVTASKKVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    D+ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|15789599|ref|NP_279423.1| methionyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235311|ref|YP_001688511.1| methionyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|25009397|sp|Q9HSA4|SYM_HALSA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10579953|gb|AAG18903.1| methionine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726377|emb|CAP13158.1| methionine--tRNA ligase [Halobacterium salinarum R1]
          Length = 689

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 118/441 (26%), Gaps = 78/441 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT-----------LA 178
             PTG +H+GH R  V GD  +  +   G E       +  G  I             L 
Sbjct: 19  PYPTGDLHIGHLRTYVSGDAFSRALRKLGQETVFVSGTDMHGTPIAVQAIEAGVGPLDLG 78

Query: 179 LSVFWRYQQALYNNDSDLP----------------------------EGYYPGVYLKHVG 210
           L    +Y                                        E      Y     
Sbjct: 79  LERHEQYADTFEEFSVAFDTYGHTDEETNVELTREFVGAWEDNDHVYETEIQVAYDPDAD 138

Query: 211 KELADKYSSELL---------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           + L D+Y              +  +E     ++   ++A +  I  +    + +   F+ 
Sbjct: 139 QWLPDRYVEGTCPYCGEHARGDECDEGCQRHLEPGEIEAPVSTITGNSAEYHERAHKFLR 198

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             DF       +   I+ +              +      C              G D  
Sbjct: 199 LSDFQEY----LEGFINRMEGTNNAKNQPREWIEGGLEDFCITRDLDWGIDYPGEGGDDL 254

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN----------MIYVMGSDHSGYVKRLEAVA 371
              +  D    Y AA   Y +      FD           +I+V+G D   +        
Sbjct: 255 VLYVWVDAPIEYVAATKQYSERVGTEEFDWASVWKDGDGEIIHVIGRDIIQHHTVFWPSM 314

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRK 430
            A ++      V     V +  DG  +  SK     I     +D     D +R+ +    
Sbjct: 315 LAGADYAEPRAVCATGFVNI--DGRGLSTSKNR--AIWAAEYLDAGFHPDLLRYYLATAS 370

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
             E  D +F   +   + N            R++       F + +FD  P+ V    S 
Sbjct: 371 GFER-DVNFSWAEFAQRVNTELADAVGNFAYRALL------FANRNFDGTPQEV----SL 419

Query: 491 FDTSELQLIVHLAEYPRVIEN 511
            D  E ++   + +Y   +  
Sbjct: 420 TDDVETEIAQAMDDYEDALNE 440


>gi|118581995|ref|YP_903245.1| isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504705|gb|ABL01188.1| Isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 924

 Score = 45.3 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 25/174 (14%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+ GSD   G+      +  +V  +      +VL    V    DG   KMSK  G+ + 
Sbjct: 557 LYLEGSDQHRGWFHSS--LLESVGTRGSAPYKSVLTHGFV---LDGQGRKMSKSMGNVVA 611

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
              V+ + G+D +R  +  +   +        +   ++         AY R R+  R   
Sbjct: 612 PEDVIKKFGADILRLWVAAQDYRDDNRISQEILTRVAE---------AYRRIRNTCRYIL 662

Query: 470 DIFPDLDFD--LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
               D + +    P   +P+   +   +L+L+         + NA    E + +
Sbjct: 663 GNISDFNPETQTVPFADMPEIDRWALHQLELLK------ERVLNAYRDYEFHVI 710


>gi|330995666|ref|ZP_08319564.1| isoleucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574725|gb|EGG56286.1| isoleucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 1140

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 89/274 (32%), Gaps = 38/274 (13%)

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L A N   D      D+ + +   I      +     V     P  +         D   
Sbjct: 559 LMASNPLKDRGFVPGDYSQDNYDKIDLHRPFVDEVVLVSPAGKPMKREADLIDVWFDSGA 618

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRL 367
           + +       +    L   DG   Y A  +A                 G D   G+   L
Sbjct: 619 MPYAQIHYPFEHKAEL---DGRTVYPADFIAE----------------GVDQTRGWFFTL 659

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            A++  V +  A   V+   LV    D    KMSKR G+ +     +++ GSD+VR+ M+
Sbjct: 660 HAISTMVFDSVAYKAVISNGLV---LDKNGNKMSKRLGNAVDPFGAIEQYGSDAVRWYMI 716

Query: 428 WRKNS-ELLDFDFCKVKEQSKENPVFYVQ-YAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
              +  + L FD   V+E S+       Q Y++         A            P    
Sbjct: 717 TNSSPWDNLKFDEAGVQEVSRTFFGKLFQTYSFLTMY-----ANVDGWHYAEADVPMGER 771

Query: 486 PQESEFDTSELQ-LIVHLAEYPRVIENATIAQEP 518
           P+   +  SEL  L+ +       ++      EP
Sbjct: 772 PEIDRWILSELNTLVKN-------VDACYEDYEP 798


>gi|327462704|gb|EGF09026.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 485

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREEAGVIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|320101651|ref|YP_004177242.1| valyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319748933|gb|ADV60693.1| valyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 932

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 40/268 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P   ++      +    +  +         I     N TG +H+GH     + D L   
Sbjct: 12  DPRAAQERWYPFWLEQGYFQADPASSKPPYVIVIPPPNVTGALHLGHALNNTIQDILIRW 71

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+              +   ++     ++ L+  +            ++ +    
Sbjct: 72  RRAQGYDAL-------WLPGTDHAGIATQAVVEKRLFQEEKKTRHDLGRDELVRRI-WAW 123

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y + +LN                         L+ +    D   +           +
Sbjct: 124 KEEYEARILNQ------------------------LQRMGCSCDWSRTRFTLDEQCARAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK--------QLLFRSTMVGDDVDRPLL 325
           R     L   G +Y G          Q    D +         +   +  + DD    L 
Sbjct: 160 RVAFFRLFEAGLIYRGKRLVNWDTHLQTAVADDEITYSEVQSSIWTIAYPLADDPTTRLQ 219

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D A      +  + ++I
Sbjct: 220 VATTRPETMLGDTAVAVHPEDERYRHLI 247


>gi|294139773|ref|YP_003555751.1| isoleucyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326242|dbj|BAJ00973.1| isoleucyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 940

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 113/333 (33%), Gaps = 51/333 (15%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    + KW+P      ++ M++      I R     + I   +    ++ H    S
Sbjct: 435 KQALGEIEKTKWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSIS 494

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--- 328
            +  + + + ++G                  D+D  +LL      GD+ D+    +D   
Sbjct: 495 LMERVANKIEQKG-------------IQAWWDLDTAELL------GDEADQYRKVTDTLD 535

Query: 329 ---GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVL 384
               S + F++ +A        G D  +Y+ GSD   G+      ++ A++ K     VL
Sbjct: 536 VWFDSGSSFSSVVAARPEYQGHGID--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVL 593

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
                    DG   KMSK  G+ I  + + +++G+D +R  +     S  +     ++ +
Sbjct: 594 THGF---TVDGKGRKMSKSVGNVIAPQTITNKLGADILRLWVAGTDYSGEMTVS-DEILK 649

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           +S +        +Y R R+  R         D  +     I      D     ++   A 
Sbjct: 650 RSAD--------SYRRIRNTTRFLLANINGFDP-VTDAVAIEDMVALD---RWVVRRAAA 697

Query: 505 YPRVIENATIAQEPYKLAFYLYDLAS-VFHGHW 536
               +  A      + +   L    S      +
Sbjct: 698 LQEELLEAYDQYNFHSVTQKLMQFCSVELGSFY 730


>gi|76789024|ref|YP_328110.1| valyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123744918|sp|Q3KM60|SYV_CHLTA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76167554|gb|AAX50562.1| valyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 939

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGIFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKQRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|86136917|ref|ZP_01055495.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85826241|gb|EAQ46438.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 855

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 38/207 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            K   +   +GI   +   GK     +E     P+G +H+GH R   +GD +A       
Sbjct: 11  EKWQKAWDEAGIFEAKRTPGKEKYYVLEMF-PYPSGKLHMGHVRNYTMGDVVARYKMSTG 69

Query: 153 --LMAFSGYEVTR---EY-------YINDA--------GAQINTLALSVFWRYQQALYNN 192
             ++   G++      E        +  D           Q+  L LS+ W  + A  + 
Sbjct: 70  HNVLHPMGWDAFGMPAENAAMASGGHPKDWTYANIAAMKEQMKPLGLSLDWSREFATCD- 128

Query: 193 DSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                E YY     ++L  + K L   Y    +   +   + ++ +  V+A        L
Sbjct: 129 -----EDYYGQQQALFLDFLDKGLV--YRKNAVVNWDPVDMTVLANEQVEAGRGWRSGAL 181

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDI 276
                    F    D+     S +  +
Sbjct: 182 VERRELTQWFFKISDYSEDLLSALEGL 208


>gi|146279165|ref|YP_001169324.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166231637|sp|A4WXA5|SYL_RHOS5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145557406|gb|ABP72019.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 873

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 92  YLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P+    +  ++   +G+   R+   +     +E     P+G +H+GH R   +GD +
Sbjct: 3   RYDPAATESRWQAAWDEAGVFTARHDPSRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVV 61

Query: 151 ASLMAFSGYEV 161
           A   A +GY V
Sbjct: 62  ARQKAAAGYSV 72


>gi|310822829|ref|YP_003955187.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395901|gb|ADO73360.1| Leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 832

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    +G+       G   K  +E +   P+G MH+GH R  ++GD  A      GY
Sbjct: 15  KWQTRWEEAGVFRAGMRPGAPKKYILEML-PYPSGKMHMGHVRNYLIGDVYARYFQMKGY 73

Query: 160 EV 161
           +V
Sbjct: 74  DV 75



 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G +H+     Y +    V   +        V       +       KMSKR G+ +
Sbjct: 543 VYVGGPEHAVMHLLYFRFWTRVMKELGLSPVDEPVKRLVTQGIVNGSDGRKMSKRWGNVV 602

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
               +V + G+D+ R  +++    E  DFD+   + + 
Sbjct: 603 APATIVKKYGADTARAYVMFAGPPER-DFDWSDAQVEG 639


>gi|188584407|ref|YP_001927852.1| glutamyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|238692875|sp|B1Z9T1|SYE1_METPB RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|179347905|gb|ACB83317.1| glutamyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 474

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 40/289 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A    F G  + R   I D   + +T A    
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR--RFGGRMLLR---IEDTDRERSTQAAIDA 58

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                     D D       G  +    +  A+++     +            Y+    +
Sbjct: 59  ILDGMRWLGLDWD-------GEVIYQFAR--AERHREVAESLLASGNAYHC--YASAEEL 107

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R+  +A            D    +  P    +  L            P + +T  + 
Sbjct: 108 AQMRETARAEGRAPRYDGRWRDRDPSEAPPGVKPVIRLRA----------PTEGETVVED 157

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +  +          D  D  LL+SDG+ TY    LA     ++ G   +I   G DH  
Sbjct: 158 AVQGRVTW----ANRDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQVIR--GDDHLT 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+      +       + L       K+SKR G      
Sbjct: 209 NAARQSQIYRALGWDVPAMAH-----IPLIHGADGAKLSKRHGALGVEE 252


>gi|29653743|ref|NP_819435.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81629459|sp|Q83EC9|SYI_COXBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29541006|gb|AAO89949.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 936

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 82/266 (30%), Gaps = 35/266 (13%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    +  WLP   +  +  M        I R  L  + I   I     + H   P+
Sbjct: 433 ERALAEIEKVTWLPAWGEARIGKMVADRPDWCISRQRLWGIPIPLFIHKKSGELHPKSPA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L  +  V       PK       D   K                    D   
Sbjct: 493 LMEK-VAQLIEKESVDAWFDLDPKVLLGDDADHYEKVTDVLDVWF-----------DSGV 540

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F       + + E      IY+ GSD   G+ +     + A+ +K    +VL    V 
Sbjct: 541 THFCV----LEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVV 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ I    VV  +G+D +R        +  ++     +K  S    
Sbjct: 597 ---DSQGRKMSKSLGNVILPADVVKNLGADVLRLWAASMDYTVEVNVSDEILKRASD--- 650

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLD 476
                 AY R R+  R       D D
Sbjct: 651 ------AYRRIRNTARFLLSNLYDFD 670


>gi|88705054|ref|ZP_01102766.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700749|gb|EAQ97856.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 462

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 118/394 (29%), Gaps = 64/394 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL  L+    Y+                        Y + + + D  +
Sbjct: 38  HIGNARPVVVFDTLFRLLQTR-YDEVV---------------------YARNITDIDDKI 75

Query: 197 PEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                  GV +  + KE  DKY  +          P ++ ++   +  +I    K +   
Sbjct: 76  MLAAKEQGVAIDVIAKEFTDKYREDTAQL--NALPPTLEPHATDNIGPMIALTEKLIEKG 133

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQG-YVYEGILPPPKSKTTQKCDMDRK----QLL 310
           H  + SE          +   + ++   G      +         +  D  R      L 
Sbjct: 134 H-AYASE--------GHVLFAVTSMENYGQLSGRSLDDMLAGARVEVADYKRHPGDFVLW 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             S+      D P  +    +    +       +   G    I + G          E  
Sbjct: 185 KPSSDDEPGWDSPWGRVRPGWHLECS----AMIREHLGPT--IDIHGGGRDLIFPHHENE 238

Query: 371 AA----AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            A    A  ++  ++ +        + D    KMSK  G+  T+R ++     + +RF +
Sbjct: 239 LAQSCCAFGDEFVRVWMH-----NAFLDMDGEKMSKSLGNVATIRELLTRYRGEVLRFAL 293

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L       L+F    + +  +    FY         +  R  + I  D D  L       
Sbjct: 294 LSAHYRSPLNFSEALLAQAEQTLTNFY---------NTLRSVQHIELDEDVPLEGEAFYS 344

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
              +   + L  I  L    R I  A    +P  
Sbjct: 345 ALCDDLNTPLA-ISELHALARDINKAAEDDKPQL 377


>gi|306518724|ref|ZP_07405071.1| glutamyl-tRNA synthetase [Clostridium difficile QCD-32g58]
          Length = 493

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 106/293 (36%), Gaps = 40/293 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R       GA  N L    +
Sbjct: 8   APSPTGFVHIGSLRTALYNYLFAKKMGGEYILRVEDTDQSRLV----EGAIENMLNAMKW 63

Query: 183 WR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  + ++   + +    G Y++    ++  +Y  +LL+        ++  +  +
Sbjct: 64  AGVNHSEGVILDDSGKVVQKGEYGPYIQSQRLDIYQEYIKQLLDSG-----KLIISFCTK 118

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
             +  +RD  +A          E   + G   +  ++ ++   + G  Y   L  P++ T
Sbjct: 119 ERLDEVRDAQRA--------AGETAKYDGHCKNLSKEEVEANIKAGIPYVIRLRLPENHT 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ R  + F +  +    D+ L+K+DG  TY     A     Y     ++I   G 
Sbjct: 171 IKFTDLVRGDMEFNTNDLD---DQVLMKTDGFPTYHF---AVVVDDYLMKITHVIR--GE 222

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +      +   +  A   +      L   L     +    K+SKR GD     
Sbjct: 223 EWVSSTPKHVYLYEAFGWEAPVFVHLPNIL-----NKEKKKLSKRQGDVAVED 270


>gi|39996321|ref|NP_952272.1| glutamyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|67461825|sp|Q74DU6|SYE_GEOSL RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|39983201|gb|AAR34595.1| glutamyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505331|gb|ADI84054.1| glutamyl-tRNA synthetase, non-discriminating [Geobacter
           sulfurreducens KN400]
          Length = 466

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 95/291 (32%), Gaps = 52/291 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+    LA                     Q  T  L +       
Sbjct: 9   APSPTGYLHVGGARTALFNWLLAR-------------------KQGGTFILRI------- 42

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI---- 244
               D+D+       V     G E       E   F + +  P+ +++  + + +     
Sbjct: 43  ---EDTDVARSTQESVDAILQGMEWLGLDWDEGP-FYQSERFPVYREFVERLLAEGKAYR 98

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
                + L  + +  + E    + D    RD++   A + +V       P    T   D+
Sbjct: 99  CYCTPEELEARREQAMKEGRKPKYD-GTCRDLVTQDADRPFVVR--FRAPHEGVTAFDDL 155

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            + ++ F +  +    D  + ++DG+ TY    +         G   +I   G DH    
Sbjct: 156 IKGRIAFNNEELD---DLIIQRTDGTPTYNFVVV---IDDATMGITTVIR--GDDHINNT 207

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
            R   +  A+     +        V +       ++SKR G    +  R +
Sbjct: 208 PRQILLYEALGYPVPRFAH-----VPMILGADKTRLSKRHGATSVMAYRDM 253


>gi|12585560|sp|O26861|SYV_METTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 877

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 42/214 (19%)

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A++ +K    +++  +V    DG   KMSK  G+ I    V+++ G+D++R       
Sbjct: 504 CMALTGEKPFSEIVINGMV-FGEDG--HKMSKSRGNVIAPEEVLEDYGADALRLWAAGSV 560

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               + F +  VK            Y Y       R+  + F  +   L        E E
Sbjct: 561 PGSDVPFAWKDVK------------YGY----KFLRKFWNAFRFISIHLTENP----EVE 600

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQ----EPYKLAFYLYDLASVF--HGHWSHGRENPR 544
               +  ++  L      +  +           ++          F  H       E  +
Sbjct: 601 ARPMDRWILSRLMNLVAEVTESLDDYNFAAAVNRV--------QTFIWHDFCDEYIEAVK 652

Query: 545 LRFVQANNRKLTMMRLQLVHAV-ASIINSGLNII 577
            R     + +  M            ++++ L ++
Sbjct: 653 YRLYSDEDPESRMA----AQNTLRMVLDTCLRLL 682


>gi|315651807|ref|ZP_07904811.1| glutamate--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485937|gb|EFU76315.1| glutamate--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 483

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 58/319 (18%), Positives = 120/319 (37%), Gaps = 52/319 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E Y+           +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEGGDFLLRI-----EDTDQERYVE------GATEI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G Y G Y++   ++  L  KY+ EL++  ++ +        
Sbjct: 58  IYKTLEETGLIHDEGPDKDGGY-GPYVQSERQKEGLYLKYAKELIDK-KQAYYCFCTPER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + ++   +  +      +H + ++E++            I      G  Y      P + 
Sbjct: 116 LNSLRSNVNGEEIMKYDKHCLSLTEEE------------IKKNLESGIPYVIRQNNPATG 163

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT   D     +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G
Sbjct: 164 TTTFHDDIYGDITVDNLELD---DMVLIKSDGYPTY---NFANVVDDHLMGITHV--VRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +++     +   +  A   +      + C L+    +    K+SKR+G   +   ++++ 
Sbjct: 216 NEYLSSSPKYNRLYEAFGWEIP--TYVHCPLIT---NEEHKKLSKRSGHS-SFEDLIEQG 269

Query: 417 -VGSDSVRFMMLWRKNSEL 434
            V    V F+ L   + E 
Sbjct: 270 YVAEAIVNFVALLGWSPED 288


>gi|212213109|ref|YP_002304045.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|254782382|sp|B6J1S2|SYI_COXB2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|212011519|gb|ACJ18900.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 936

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 68/213 (31%), Gaps = 26/213 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    +  WLP   +  +  M        I R  L  + I   I     + H   P+
Sbjct: 433 ERALAEIEKVTWLPAWGEARIGKMVADRPDWCISRQRLWGIPIPLFIHKKSGELHPKSPA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L  +  V       PK       D   K                    D   
Sbjct: 493 LMEK-VAQLIEKESVDAWFDLDPKVLLGDDADHYEKVTDVLDVWF-----------DSGV 540

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F       + + E      IY+ GSD   G+ +     + A+ +K    +VL    V 
Sbjct: 541 THFCV----LEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVV 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              D    KMSK  G+ I    VV  +G+D +R
Sbjct: 597 ---DSQGRKMSKSLGNVILPADVVKNLGADVLR 626


>gi|21702580|gb|AAM75977.1|AF481102_13 unknown [Candidatus Tremblaya princeps]
          Length = 67

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           SANPTG    GH R A +G++L+  +   G  V RE+Y ND 
Sbjct: 2   SANPTGHC-AGHARQASIGESLSCTLRAIGAFVCREFYYNDR 42


>gi|57241991|ref|ZP_00369931.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017183|gb|EAL53964.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 808

 Score = 45.3 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K       S     ++      K  +      P+G +H+GH R   +GD LA      G
Sbjct: 10  QKWQKIWQESEAFEPKDDFTLPKKYILSMF-PYPSGRIHMGHVRNYAIGDALARYYRKMG 68

Query: 159 YEV 161
           + V
Sbjct: 69  FNV 71


>gi|319936629|ref|ZP_08011042.1| methionine-tRNA ligase [Coprobacillus sp. 29_1]
 gi|319808186|gb|EFW04751.1| methionine-tRNA ligase [Coprobacillus sp. 29_1]
          Length = 640

 Score = 45.3 bits (106), Expect = 0.033,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 113/375 (30%), Gaps = 61/375 (16%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172
            +N         I + S  P    H+G+    ++ D +A      GY V  +   ++ G 
Sbjct: 1   MKNPKDYYLTTAITYTSGKP----HIGNTYEIILADAIARSKRQEGYNVYFQTGTDEHGQ 56

Query: 173 QINTLALSV------FWRYQQALYNNDSDLPEGYYP-------GVYLKHVGKELADKY-- 217
           +I   A         F   + A+  N  DL +  Y          ++K V K     Y  
Sbjct: 57  KIELKAQEAGIPPKQFVDEKAAVVKNIWDLMDSSYDKFMRTTDEYHIKQVQKIFKKLYDQ 116

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-----IFISEDDFHRGDPSP 272
               L   E K+    + +  ++ +   +         HD      F     +       
Sbjct: 117 GDIYLGHYEGKYCTACESFFTESQLVDGKC-PDCGGPVHDAKEEAYFFKLSKYADRLIQH 175

Query: 273 IR---DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           I    + I  ++R+  +    L P      Q   + R    +   +  D      +  D 
Sbjct: 176 IENHPEFIQPVSRKNEMMNNFLKP----GLQDLCVSRTTFTWSIPVDFDPKHVVYVWIDA 231

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              Y              G+D    V G+    Y +   A    + +   + + +   ++
Sbjct: 232 LTNYITG----------LGYD----VDGNHGELYKRYWPADLHLIGKDIVRFHTIYWPIM 277

Query: 390 RLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SEL 434
            +  D                  KMSK  G+ I    +V   G D+VR+ +L        
Sbjct: 278 LMALDIPLPKQVFGHPWLLQGESKMSKSKGNVIYADDLVQIFGVDAVRYYVLHEIPYDND 337

Query: 435 LDFDFCKVKEQSKEN 449
               +  + E+   +
Sbjct: 338 GSITWDLLVERINSD 352


>gi|289623820|ref|ZP_06456774.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649171|ref|ZP_06480514.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867841|gb|EGH02550.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 948

 Score = 45.3 bits (106), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGISRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|256848563|ref|ZP_05554004.1| glutamyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714615|gb|EEU29595.1| glutamyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 502

 Score = 45.3 bits (106), Expect = 0.033,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 108/297 (36%), Gaps = 38/297 (12%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI 174
            KV + + + +PTG +H+G+ + A+     A       ++     ++ R     +  +Q+
Sbjct: 3   KKVRVRY-APSPTGFLHIGNAQSALFNYLFARHFNGTMVLRIEDTDIARNVPHGEE-SQM 60

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             L     W         D   P+ Y P    +   + +  KY  +L++           
Sbjct: 61  ENL----HWLGVDWDEGPDKPNPK-YAPYHQTERNKEGIYHKYVQKLIDEG-----KAYY 110

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPP 293
           DY+ +  ++ +R++ KA          E   + G   +  ++ ID    +G      L  
Sbjct: 111 DYTTEEELQKMREEQKA--------KGETPRYGGHWYNASQEEIDAAKAKGIKPSVRLHL 162

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           PK  T +  D     + F S  +G D    + K++G  TY   + A     Y     + +
Sbjct: 163 PKDHTLEWDDWALGHISFNSDNLGGDF--VIEKNNGMPTY---NFAVVIDDYLMDITDCL 217

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
              G+DH     +  AV  A+         +      ++      K+SKR  + +  
Sbjct: 218 R--GADHIANTPKQIAVYEALGVDHPHFCHISL----IFNPATGKKLSKRDKNTLQF 268


>gi|154707562|ref|YP_001425008.1| isoleucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082321|sp|A9KEI8|SYI_COXBN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154356848|gb|ABS78310.1| isoleucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 936

 Score = 45.3 bits (106), Expect = 0.033,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 68/213 (31%), Gaps = 26/213 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    +  WLP   +  +  M        I R  L  + I   I     + H   P+
Sbjct: 433 ERALAEIEKVTWLPAWGEARIGKMVADRPDWCISRQRLWGIPIPLFIHKKSGELHPKSPA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L  +  V       PK       D   K                    D   
Sbjct: 493 LMEK-VAQLIEKESVDAWFDLDPKVLLGDDADHYEKVTDVLDVWF-----------DSGV 540

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F       + + E      IY+ GSD   G+ +     + A+ +K    +VL    V 
Sbjct: 541 THFCV----LEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVV 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              D    KMSK  G+ I    VV  +G+D +R
Sbjct: 597 ---DSQGRKMSKSLGNVILPADVVKNLGADVLR 626


>gi|15678792|ref|NP_275909.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621857|gb|AAB85270.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 897

 Score = 45.3 bits (106), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 42/214 (19%)

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A++ +K    +++  +V    DG   KMSK  G+ I    V+++ G+D++R       
Sbjct: 524 CMALTGEKPFSEIVINGMV-FGEDG--HKMSKSRGNVIAPEEVLEDYGADALRLWAAGSV 580

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               + F +  VK            Y Y       R+  + F  +   L        E E
Sbjct: 581 PGSDVPFAWKDVK------------YGY----KFLRKFWNAFRFISIHLTENP----EVE 620

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQ----EPYKLAFYLYDLASVF--HGHWSHGRENPR 544
               +  ++  L      +  +           ++          F  H       E  +
Sbjct: 621 ARPMDRWILSRLMNLVAEVTESLDDYNFAAAVNRV--------QTFIWHDFCDEYIEAVK 672

Query: 545 LRFVQANNRKLTMMRLQLVHAV-ASIINSGLNII 577
            R     + +  M            ++++ L ++
Sbjct: 673 YRLYSDEDPESRMA----AQNTLRMVLDTCLRLL 702


>gi|325844466|ref|ZP_08168193.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489140|gb|EGC91524.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 446

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 63/466 (13%), Positives = 141/466 (30%), Gaps = 79/466 (16%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + +      E  R +     ++ I          +H+G+ R  +  D +     + GYEV
Sbjct: 3   IYNTYTREKEEFRPIEENKVRMYI--CGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYEV 60

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                + D   +I   A+                  E       +         + +  L
Sbjct: 61  EFVSNVTDVDDKIINRAI------------------EEGVTEAQISEKYLNYFLECNKVL 102

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
              P      + +  S+ +M++ I              + E DF       +   ID + 
Sbjct: 103 NALPLTAMPKVTE--SMDSMIEFINQ------------LVERDFAYAVDGDVYFRIDKVR 148

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             G +    +   +       D  ++     +L++ T  G   D P     G   +    
Sbjct: 149 EYGQLSGKKIDELEVGARIAEDSKKENPLDFVLWKKTDKGITWDSPW--GAGRPGWHTEC 206

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +          F   I + G          E  +A ++   +  I      + RL  +  
Sbjct: 207 V----VMINNQFHGKIDIHGGGTDLQFPHHENEIAQSLCMYEHNIANYWMHVGRLGLN-- 260

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ I ++ +++++ +++ R  ML     + +++    ++   KE      Q 
Sbjct: 261 NEKMSKSIGNVINVKDLIEQIDANAFRLFMLSVHYRQPINYTEENIQLAVKE-----WQ- 314

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                     + K  +  L   L     +  E         L+    ++   +E      
Sbjct: 315 ----------KVKSTYDQLHLKLDLAGALDVEPSVVPEIEALM---NQFVEALE---DD- 357

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                    ++ A+     +   +E  ++   +A++       + L
Sbjct: 358 ---------FNTANAIASLYGAIKEINKMVRAKASDEANRYALMTL 394


>gi|258542241|ref|YP_003187674.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633319|dbj|BAH99294.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636378|dbj|BAI02347.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639431|dbj|BAI05393.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642487|dbj|BAI08442.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645542|dbj|BAI11490.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648595|dbj|BAI14536.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651648|dbj|BAI17582.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654639|dbj|BAI20566.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 512

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 104/334 (31%), Gaps = 73/334 (21%)

Query: 159 YEVTREYYIN---DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--- 212
           Y  T  YY+N     G    ++A  V  R+ +   +    L      G  ++   +    
Sbjct: 6   YVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQANGT 65

Query: 213 ----LADKYSSELLNFPEEKWLPIVKDY----------SVQAMMKIIRDD-------LKA 251
                ADK S++  N  +   +    D+          S QA+ K + D+        + 
Sbjct: 66  DAKSFADKVSADFRNMADAMNIS-YDDFIRTTEPRHITSTQALWKKVADNGAIYLGAYEG 124

Query: 252 LNIQHD-IFISEDDFHRGDPSP-----------------------IRDIIDNLARQGYVY 287
                D  F  ED+   G                            +D +  L      +
Sbjct: 125 WYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNPDF 184

Query: 288 EG------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            G       +     +  +   + R    +   + GDD     +  D    Y +A L Y 
Sbjct: 185 LGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSA-LGY- 242

Query: 342 KCKYERGFDNM------IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
               +     M      ++++G D    + R  AV        A I +        +   
Sbjct: 243 ---PDTNAPRMAFWPANLHLVGKD----IARFHAVYWPAFLMAAGIELPRKVFANGWWTI 295

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ +  R +V E G D+VRF +L  
Sbjct: 296 EGQKMSKSLGNVVDPRDLVKEFGLDAVRFFLLRE 329


>gi|240850322|ref|YP_002971715.1| glutamyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267445|gb|ACS51033.1| glutamyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 476

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 98/305 (32%), Gaps = 56/305 (18%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I   + +PTG +H+G  R A+     A              +          + L +  
Sbjct: 3   VITRFAPSPTGFLHIGGARTALFNWLYAK-------------HTG------GKMLLRIED 43

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--- 240
             ++                + L + G  ++    +E      E+ +   K Y   A   
Sbjct: 44  TDRERSTEAAVKAIIDGLHWMGLSYDGTPISQFERAERHRQIAEQLVKDGKAYYCYASPE 103

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +R+  +A            D  R +             +G      +  P+   T 
Sbjct: 104 ELAEMREKARAEGRPPRYDGRWRDRDRSEAP-----------KGVKPVIRIKAPEEGETI 152

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I   G DH
Sbjct: 153 VNDRVQGDVRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGITHIIR--GDDH 204

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R   +  A+      I V+    +    +G   K+SKR G           +G D
Sbjct: 205 LTNAARQMIIFKAMGWD---IPVMAHIPLIHGENGA--KLSKRHG----------ALGVD 249

Query: 421 SVRFM 425
           + R M
Sbjct: 250 AYRTM 254


>gi|206895205|ref|YP_002246807.1| glutamyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|238064687|sp|B5Y7R0|SYE_COPPD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|206737822|gb|ACI16900.1| glutamyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 467

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 45/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A    F G  + R   I D              +   +
Sbjct: 14  APSPTGYLHVGGARTALFNYLFAK--KFGGTFLLR---IED--TDPERSKPEYSEQILIS 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y      H+ ++   K         EE         + +      +  
Sbjct: 67  MKWLGLDWDEGPYHQSERMHIYQQYTQK-------LLEEGKAYRCFCTTEELEQMREQQR 119

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            + L  ++D   S            ++ I+    +G  +   L  P+ +     D   K 
Sbjct: 120 QQGLPTRYDGRCSR---------LTQEEIEERLNKGMPFAVRLKVPQDRGIIAWDDMVKG 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  ++   DD    L++SDG+ TY   + A     +  G  +++   G DH     +  
Sbjct: 171 HIEINSSELDDF--ILVRSDGTPTY---NFAVVIDDHTMGVTHVLR--GEDHIPNTPKQI 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            +  A+  +  +        V +       K+SKR G           VG ++ R
Sbjct: 224 LIYEALGWETPEFGH-----VPMILGKDKTKLSKRHG----------AVGVEAYR 263


>gi|220918010|ref|YP_002493314.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955864|gb|ACL66248.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 832

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +G           T+  +E     P+G MH+GH R   +GD LA  +   G+
Sbjct: 15  RWQRRWEEAGAFKAGRRPDADTRYVLEMF-PYPSGAMHMGHARVYTIGDALARHLRMRGF 73

Query: 160 EV 161
           +V
Sbjct: 74  DV 75



 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G +H+     Y +    V   +    +   +  L+ + +    DG   KMSKR G+
Sbjct: 537 VYVGGPEHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGR--KMSKRWGN 594

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    +V   G+D+VR  ML+    E  D D+  
Sbjct: 595 VVAPGGMVSRFGADTVRMFMLFAAPPEK-DIDWSD 628


>gi|197123221|ref|YP_002135172.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173070|gb|ACG74043.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 832

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +G           T+  +E     P+G MH+GH R   +GD LA  +   G+
Sbjct: 15  RWQRRWEEAGAFKAGRRPDADTRYVLEMF-PYPSGAMHMGHARVYTIGDALARHLRMRGF 73

Query: 160 EV 161
           +V
Sbjct: 74  DV 75



 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G +H+     Y +    V   +    +   +  L+ + +    DG   KMSKR G+
Sbjct: 537 VYVGGPEHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGR--KMSKRWGN 594

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    +V   G+D+VR  ML+    E  D D+  
Sbjct: 595 VVAPGGMVSRFGADTVRMFMLFAAPPEK-DIDWSD 628


>gi|154149192|ref|YP_001406061.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|189082989|sp|A7I0M0|SYL_CAMHC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|153805201|gb|ABS52208.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 813

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        GI   +       K  +      P+G +H+GH R   +GD ++      GY
Sbjct: 10  KWQEIWDKEGIFEPKKDYNLQKKYILSMF-PYPSGRIHMGHVRNYTIGDAISRYYRMQGY 68

Query: 160 EV 161
            V
Sbjct: 69  NV 70


>gi|153207885|ref|ZP_01946462.1| isoleucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212219167|ref|YP_002305954.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|254782381|sp|B6J9J5|SYI_COXB1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120576311|gb|EAX32935.1| isoleucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013429|gb|ACJ20809.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 936

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 82/266 (30%), Gaps = 35/266 (13%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    +  WLP   +  +  M        I R  L  + I   I     + H   P+
Sbjct: 433 ERALAEIEKVTWLPAWGEARIGKMVADRPDWCISRQRLWGIPIPLFIHKKSGELHPKSPA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L  +  V       PK       D   K                    D   
Sbjct: 493 LMEK-VAQLIEKESVDAWFDLDPKVLLGDDADHYEKVTDVLDVWF-----------DSGV 540

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F       + + E      IY+ GSD   G+ +     + A+ +K    +VL    V 
Sbjct: 541 THFCV----LEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVV 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ I    VV  +G+D +R        +  ++     +K  S    
Sbjct: 597 ---DSQGRKMSKSLGNVILPADVVKNLGADVLRLWAASMDYTVEVNVSDEILKRASD--- 650

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLD 476
                 AY R R+  R       D D
Sbjct: 651 ------AYRRIRNTARFLLSNLYDFD 670


>gi|194578813|ref|NP_001124133.1| valyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|190337268|gb|AAI63242.1| Si:ch211-152p11.2 protein [Danio rerio]
          Length = 1057

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 58/217 (26%), Gaps = 37/217 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-----ANPTGPMHVGHCRCAVVGD 148
           SP Y+             +      K      +  S      N TG +H+GH     + D
Sbjct: 92  SPEYVEFGWYQWWEKQGFFSPEQHSKQPHAVDKHFSLCIPPPNVTGTLHLGHALTVAIED 151

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            LA      GY+V      + AG        SV  R                        
Sbjct: 152 ALARWRRMQGYKVLWVPGCDHAG----IATQSVVERK----------------------- 184

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
               L  +      +F  E++L  V  +  +     I   L+ L    D   +       
Sbjct: 185 ----LLREQGKSRQDFSREEFLKQVWMWKNEKG-DEIYHQLRKLGASLDWSRACFTMDPA 239

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
             S + +    L   G +Y        S T +    D
Sbjct: 240 FSSAVTEAFVRLCDSGLIYRAEGLINWSCTLESAISD 276


>gi|126658249|ref|ZP_01729399.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620398|gb|EAZ91117.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 853

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K     V  G++       K     +      P+G +H+GH R  V+ D +A L    G
Sbjct: 12  QKWQQDWVKQGLDKTPENSDKPKFYALSMF-PYPSGNLHMGHVRNYVITDVIARLKRLQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YRV 73


>gi|114764301|ref|ZP_01443529.1| glutamyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543249|gb|EAU46266.1| glutamyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 468

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 107/346 (30%), Gaps = 64/346 (18%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 1   MTVVTRFAPSPTGYLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRARSTPEATAAI 57

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                     +D ++   +        V +EL  K  +    F  ++ +   ++ + +A 
Sbjct: 58  LKGLDWLGLGHDGEVVSQFERADRHAEVARELLAK-GAAYKCFSTQEEITAFREEAKEAG 116

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                             + +  +   DP+   D           Y   L  P    T  
Sbjct: 117 R---------------STLFQSPWRDADPASHPDA---------PYAVRLKTPTEGETVI 152

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  + ++  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 153 EDEVQGRVTIRNDQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 204

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------IT 409
               R   +  A+          +   + L       K+SKR G                
Sbjct: 205 NNAARQMGIYTAMGWPLP-----VYAHIPLIHGPDGKKLSKRHGALGVDEYQKIGYPSAG 259

Query: 410 LRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKE 444
           +R+ +  +G           + ++ +  L         FDF K++ 
Sbjct: 260 MRNYLARLGWSHGDDEFFTDAQAIEWFDLSGIGKSAARFDFKKLEN 305


>gi|309775575|ref|ZP_07670575.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916669|gb|EFP62409.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 799

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 32/267 (11%)

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAM 241
           W + +    +   + EG   G   K    E     +SE L+   +++ +  +  +  +  
Sbjct: 347 WEFAKKFDIDIIPVLEG---GDVTKEAYTEDGVHINSEFLDGMGKQEAIDTMIAWLQEHN 403

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               +   K      D   S    + G+P PI  + D   R   + E  L  P++K  + 
Sbjct: 404 CGCAKTTYKL----RDWLFS-RQRYWGEPIPIIHMEDGTTRTVDIDELPLELPETKNFKP 458

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTYFAA-------DLAYFKCKYE 346
                  L      +  ++D    K +        GS  Y+         D    +   +
Sbjct: 459 SGSGESPLAHCEDWLNVEIDGVKGKRETNTMPQWAGSCWYYLRYIDPKNNDAIAAEELLK 518

Query: 347 RGFDNMIYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKM 400
                 +YV G++H+     Y +    V         +     L  + + L  +    KM
Sbjct: 519 HWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVPTKEPFQRLFHQGMILGEN--NEKM 576

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMML 427
           SK  G+ +    +V+  G+D++R   +
Sbjct: 577 SKSRGNVVNPDDIVESHGADALRVYEM 603


>gi|239832034|ref|ZP_04680363.1| glutamyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824301|gb|EEQ95869.1| glutamyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 627

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 102/305 (33%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  +   + +PTG +H+G  R A+     A     +G ++       D     +    +
Sbjct: 156 PKPVVTRFAPSPTGYLHIGGARTALFNWLYA---KHNGGKMLLRIEDTDRERSTDAATAA 212

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +         + D +    +      + V +EL          +   + L  +++ +   
Sbjct: 213 ILDGLTWLGLDWDGEAISQFERAPRHREVAEELVA-LGKAYYCYATPEELEEMREKARAE 271

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                 D         D   SE       P+ ++ +I             +  P+   T 
Sbjct: 272 GRPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPQEGETL 308

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH
Sbjct: 309 VQDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDH 360

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R   +  A+S    Q++      + L       K+SKR G           +G D
Sbjct: 361 LTNAARQTVIYNAMSWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVD 405

Query: 421 SVRFM 425
           + R M
Sbjct: 406 AYRAM 410


>gi|182416784|ref|ZP_02948179.1| valyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667221|ref|ZP_04527205.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379364|gb|EDT76861.1| valyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655569|gb|EEP53125.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 880

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 53/199 (26%), Gaps = 35/199 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P      +         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEDRIYKTWEEKKYFTPEVDKSKKPFTIVMPPPNITGQLHLGHAFDDTLQDILI 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVG 210
                 GY                                    LP E +        V 
Sbjct: 70  RFKRMQGYCTL--------------------------------WLPGEDHASIATEVKVA 97

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             L+D+   +      E +L  V ++S       IR+ +K L +  D             
Sbjct: 98  NMLSDQ-GYDKKEMGREAFLEKVWEWS-DKYRATIRNQVKKLGVSADFTREAFTMDENLS 155

Query: 271 SPIRDIIDNLARQGYVYEG 289
           + ++ +   L  +  +Y+G
Sbjct: 156 AAVKHVFVKLYNEDLIYQG 174


>gi|159029961|emb|CAO90340.1| cysS [Microcystis aeruginosa PCC 7806]
          Length = 480

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 61/317 (19%), Positives = 103/317 (32%), Gaps = 38/317 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  VV D +   + + GY+V       D   +I         + +       ++ 
Sbjct: 38  HLGHARTCVVWDVVRRYLEYLGYKVRYIQNFTDIDDKILN-----RAKNEHTTMAAVAEK 92

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y     K +G   AD Y               +K    +   K       A     
Sbjct: 93  FIQAYFEDMAK-LGVRPADAYPRATHTLDG------IKRLVYELEQKGY-----AYPSDG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ S   F        R  +D+L        G +     +  +K D     L   +   
Sbjct: 141 DVYYSVRRFSDYGKLSGRK-LDDLQAGA---SGRVETDDPEAIKKQDPFDFALWKGAKPG 196

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVA 371
               D P     G   +     A  K +     D  I+V GSD     H   + + EA  
Sbjct: 197 EPSWDSPW--GQGRPGWHIECSAMVKEQLGETID--IHVGGSDLIFPHHENEIAQSEAA- 251

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                 K   +  L   +         KMSK  G+FIT+R ++ +    +VR ++L  + 
Sbjct: 252 ----TGKPLAHYWLHNGMVKV---AGEKMSKSLGNFITIRELLAKYDPLAVRLLILGAQY 304

Query: 432 SELLDFDFCKVKEQSKE 448
            + +DF    ++  +  
Sbjct: 305 RKPIDFSDEGLQAATNG 321


>gi|12045191|ref|NP_073002.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351181|sp|P47576|SYV_MYCGE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3844913|gb|AAC71557.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078837|gb|ABY79455.1| valyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 837

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 64/188 (34%), Gaps = 35/188 (18%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L  I  +   +            +     N TG +H+GH     + D +       G+ +
Sbjct: 20  LYEIWNNAGFFKPKDKNNSFTAIL--PPPNLTGTLHIGHAFEVSITDQIMRFKKMQGFSI 77

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                  +     +   ++   +Y++                         +A K + + 
Sbjct: 78  -------NWIPGFDHAGIATQTKYEK-------------------------IALKENQKY 105

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
            +  ++K   ++ ++++    +II++ LK+L +  +   ++          + +   NL 
Sbjct: 106 FDADDDKKSEMIMNWALN-QSEIIKNQLKSLGVCLNWSETKFTLSEQANKIVNNCFKNLY 164

Query: 282 RQGYVYEG 289
             G++Y+ 
Sbjct: 165 ENGFIYQA 172


>gi|21909836|ref|NP_664104.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|25009347|sp|P59080|SYM_STRP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21904022|gb|AAM78907.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
          Length = 665

 Score = 44.9 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 74  MAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 134 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 194 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 251

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 252 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 337


>gi|327399977|ref|YP_004340816.1| Isoleucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315485|gb|AEA46101.1| Isoleucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 1046

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 20/204 (9%)

Query: 341 FKCKYERGFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQINVLLCELVRL---YRDG 395
              + +  F+ +     +D    G+ +      + +       N    + V +     D 
Sbjct: 527 HFPRKKEDFERL---WPADFITEGHDQTRGWFYSQLGASVVAFNRAPYKTVLMHGFTLDE 583

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--Y 453
              KMSK  G+ +    VV+++G D+ R  +L     E L F + + K  ++   +F   
Sbjct: 584 QGRKMSKSLGNVVEPEEVVEKIGVDAFRLYVLSSALWEDLRFSWEEAKNYNRMLNIFWNA 643

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           V++AY    S+ R+        DF+         E      +  +I  L    ++   A 
Sbjct: 644 VRFAYM-YMSLDRKDFISSILADFEY--------EKHQTVEDRWIISKLESLNKLAVEAL 694

Query: 514 IAQEPYKLAFYLYD-LASVFHGHW 536
              + +++    +D +   F   +
Sbjct: 695 ENYQLHRVVRAFFDFIVEDFSRWY 718


>gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 665

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GYEV     +++ G +I T A       Q  + N
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGYEVFYLTGLDEHGQKIQTKAAEAGISPQTYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+ +           +++      +E+      +LL   +        W  +  +++
Sbjct: 74  MAKDVKDLWQLLDISYNKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ ++ +  D     I           ++SE+ +          ++     Q    + 
Sbjct: 134 FTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLVAFFKEQPDFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y   
Sbjct: 194 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYTTA-LGY-GQ 251

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +         L+     + +DG
Sbjct: 252 TDHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 337


>gi|300309767|ref|YP_003773859.1| valyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072552|gb|ADJ61951.1| valyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 971

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 62/226 (27%), Gaps = 41/226 (18%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ + K           +      +    +I+    N TG +H+GH     + D L  
Sbjct: 42  FEPAEIEKFWREEWEKRGYFAATTDAEKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTR 101

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GY                                  + +P   + G+  + V + 
Sbjct: 102 YHRMRGYNT--------------------------------AWIPGTDHAGIATQIVVER 129

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             D       +   EK++  V ++  ++    I   ++ +    D               
Sbjct: 130 QLDAQKVSRHDLGREKFVEKVWEWKEKSG-STITGQMRRMGASTDWAREYFTMDPKMSKV 188

Query: 273 IRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           + ++   L  QG +Y G        +L    S      + +   + 
Sbjct: 189 VTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGSMW 234


>gi|302381491|ref|YP_003817314.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192119|gb|ADK99690.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 865

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P        +       +     G+     +E     P+G +H+GH R  V+GD +A
Sbjct: 7   RYDPKTAEPRQQARWTEANAFVTRDTGRPKYYVLEMF-PYPSGNIHMGHARNYVMGDVVA 65

Query: 152 SLMAFSGYEV 161
                 GY+V
Sbjct: 66  RHKRAQGYDV 75


>gi|210135312|ref|YP_002301751.1| valyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133280|gb|ACJ08271.1| valyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 872

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 99/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLSQGIKKED-------LGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPL------LKSDGSYTY 333
               K        R + LF  + +             G  V  PL      + +D    +
Sbjct: 209 LENQKDFLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLINRIIPIIAD---EH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
              +      K   G D   Y +G  H             + ++K  +NV   E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EMIKIFDEKGILNVHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|188532525|ref|YP_001906322.1| valyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188027567|emb|CAO95414.1| Valyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 951

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPHGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|28896469|ref|NP_802819.1| methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|28811720|dbj|BAC64652.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 666

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|288575148|ref|ZP_06393505.1| glutamyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570889|gb|EFC92446.1| glutamyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 444

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 80/277 (28%), Gaps = 63/277 (22%)

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF----------RSTMVGDDVD 321
             R   D L  +G  Y+        K     D+  + +++          +    G   D
Sbjct: 91  LYRKYADELLERGLAYKDG-EAVIFKVPLGEDIGFEDVVYGSIDVVSDSLKDGRTGQMKD 149

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
             L+KSDG  TY   + A     +  G  ++I   G DH     +   +  A+  +    
Sbjct: 150 IVLIKSDGMPTY---NYAVVVDDHTMGITHVIR--GEDHISNTPKQVLLYKALGWELPTF 204

Query: 382 NVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV--------------------VDEVGS 419
                  + +       K+SKR G       R +                      E+  
Sbjct: 205 AH-----LPMILGKDKKKLSKRHGATSVYEYRDMGYMPDSVFNFLALLGWAPSGDREIFD 259

Query: 420 D--SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
              ++    L   N +   FD  K+          YV   +       ++ + + P  + 
Sbjct: 260 RDLAIDEFDLKDVNRKPSVFDMDKLN---------YVNQGHLHALPTAKKIEMLAPFWEE 310

Query: 478 DLFPRNVIPQESEFDTSELQLI-------VHLAEYPR 507
                + I +   +      L+         LAE+  
Sbjct: 311 AGIDLSSIDES--YMEKAFDLMGGRGRTVKDLAEFTD 345


>gi|227486662|ref|ZP_03916978.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235374|gb|EEI85389.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 878

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 72/268 (26%), Gaps = 42/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P    K +      G  +   +        I     N TG +H+GH     + D +   
Sbjct: 6   NPQDFEKKIYKEWEDGGYFKAGVNPDKKPFTIVMPPPNVTGQLHLGHALNNTLQDIVIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              +G+                           +AL+   +D          +  +  E 
Sbjct: 66  KRMAGF---------------------------EALWIPGTDHASISTEAKVVGKIAGE- 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   + +L    D++ +     I+  L+ + +  D               +
Sbjct: 98  ----GKTKADLGRDGFLKEAWDWTHKYG-GTIKKQLRTIGVSCDWDHDSFTMDENLTRAV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLFRSTMVGDDVDRPLL 325
           + +   +   G +Y G          +    D        + +L +      +D D  + 
Sbjct: 153 KRVFKKMYDDGLIYRGDRIVNWDPMAETAISDAEVYHKDQKGKLWYIKYYY-EDSDDFIT 211

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         DLA      +  F + I
Sbjct: 212 IATTRPETMLGDLAVAVNPEDERFKDKI 239



 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 18/154 (11%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +   +  V A++     ++         L RD    KMSK  G+ +    VV++ G+D++
Sbjct: 485 FFWVIRMVFASL-YTTGKVPFSHVLFTGLIRDSQGRKMSKSLGNGVDPIDVVNKYGADAL 543

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF ++   +    D  + + +  +  N  F  +   A    +     D   DLDFD    
Sbjct: 544 RFTLITGNSPGN-DMRYDEDRLLASRN--FANKLWNASRFVLMN--IDESDDLDFDGKNL 598

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            +  +          ++  L +   VIE+ +   
Sbjct: 599 TLEDKW---------ILKRLNQ---VIEDVSKNL 620


>gi|259907063|ref|YP_002647419.1| valyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962685|emb|CAX54140.1| Valyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283476863|emb|CAY72709.1| valyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 951

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPHGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|220935312|ref|YP_002514211.1| valyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996622|gb|ACL73224.1| valyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 920

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 70/227 (30%), Gaps = 43/227 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + + L         +  +  G+GT   I     N TG +H+GH     + DTL 
Sbjct: 4   TYDPRAIEQSLYEQWERAGHFRPS--GEGTPYCIMLPPPNVTGTLHMGHAFQHTLMDTLM 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                SG +                           AL+   +D        V  + +  
Sbjct: 62  RYHRMSGDD---------------------------ALWQGGTDHAGIATQMVVERQLAT 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   ++     +   EK+L  V  +  Q+   I R  ++ L    D          G   
Sbjct: 95  DKVSRH-----DLGREKFLERVWQWKEQSGGTITRQ-MRRLGNSIDWERERFTMDEGLSR 148

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
            +R++   L  +G +Y G        +L    S      + ++  L 
Sbjct: 149 AVREVFVRLHDEGLIYRGKRLVNWDPVLHTAVSDLEVINEEEQGSLW 195


>gi|161751094|ref|NP_377157.2| valyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|90108445|sp|Q972A3|SYV_SULTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 809

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 57/184 (30%), Gaps = 7/184 (3%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            + +  LS      +   ++   K     I+      +G +H+GH     + DT+     
Sbjct: 26  KWQQIWLSKEYWEKVFRFKDEDEKSPVFVIDTPPPFTSGELHMGHAYWVTIADTIGRFKR 85

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             GY V           Q     L V +R +    N +  L +       +    KE   
Sbjct: 86  LQGYNVL---LPQGWDTQGLPTELKVQYRLKIPKENRELFLKKCVEWTEDMIKKMKEAMI 142

Query: 216 K--YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL--NIQHDIFISEDDFHRGDPS 271
           +  Y  E   +    +    +    ++++++ +  L  +     +     E    + +  
Sbjct: 143 RLGYRPEWERYEYRTYENSYRKIIQKSLLEMYKLGLIEIREGPVYWCPKCETALAQSEVG 202

Query: 272 PIRD 275
            +  
Sbjct: 203 YLEK 206


>gi|333029641|ref|ZP_08457702.1| glutamyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740238|gb|EGJ70720.1| glutamyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 505

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 102/290 (35%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MSDRKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDMIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +++  KY   LL+            + 
Sbjct: 57  EEYILESFKWLNIHFDEGVSFGGNYGPYRQSERRDIYKKYVKVLLDSG-----KAYVAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +   R ++     Q+D   S     R   +  R+ ++ L  QG  Y        ++
Sbjct: 112 TPEELDKKRHEVANF--QYD--ASTRLEMRNSLTLSREEVEKLIAQGEQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVYVNDLIRGKVVINSSVLD---DKVLYKSADELPTYH---LANIVDDHLMDISHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   ++   +     L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEETMPSFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|317011778|gb|ADU85525.1| leucyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 806

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+        K           +      K  K  I  +   P+G +H+GH R   +G
Sbjct: 3   FINI-------EKKWQEFWWKNKSFEPKDDFKLPKKYILSMLPYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|294674817|ref|YP_003575433.1| glutamate--tRNA ligase [Prevotella ruminicola 23]
 gi|294473641|gb|ADE83030.1| glutamate--tRNA ligase [Prevotella ruminicola 23]
          Length = 505

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFA---KQHGGDLVFRIEDTDSNRFVPGAEEYIIESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +++  KY  +LL+  ++ ++       ++A    I+  
Sbjct: 68  GIKFDEGVSFGGDKGPYRQSERRDIYKKYVQQLLD-ADKAYIAFDTPEELEAKRAEIQ-- 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               N Q+D         R   +  +D ++ L  +G  Y         +     D+ R +
Sbjct: 125 ----NFQYDCHTRGQ--MRNSLTMPKDEVEKLIAEGKQYVVRFKVEAGQEILVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +  +S +     D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VRVKSDICD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+ L  DG   K+SKR GD
Sbjct: 231 VMLYRAFGWEDTMPQFAHLPLL-LKPDGKG-KLSKRDGD 267


>gi|86356478|ref|YP_468370.1| isoleucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86280580|gb|ABC89643.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 968

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V + IL    ++       +  +  F              D+      S  ++T+   D 
Sbjct: 530 VNQRILNAFDAEGADAWFAEGAKERFLGNEHDPAKWTQVMDILDVWFDSGSTHTFTLED- 588

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 589 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 640

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 641 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 691

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE  +++     A 
Sbjct: 692 YRKLRNTIRWMLGTLAHDKGEEIALADLPELE-------QLMLHRLAELDQLVRENYDAF 744

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 745 DFKKIARALIDFANVELSAFYFDVRKD 771


>gi|24378828|ref|NP_720783.1| glutamyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|30316155|sp|Q8DVX9|SYE_STRMU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|24376704|gb|AAN58089.1|AE014881_3 putative glutamyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 485

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 99/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L      L  KY  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ALYKKYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R+  +A   +   +I+E  F           I      G V    L   ++  
Sbjct: 109 EEELAAERERQEAAG-ETPRYINE--FLGMSADEKAAYIAKRQAAGIVPTVRLKVNEAGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +          +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPAFAH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|127511856|ref|YP_001093053.1| valyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|126637151|gb|ABO22794.1| valyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 959

 Score = 44.9 bits (105), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 58/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     L                               V +
Sbjct: 64  RYQRMKGKNTLWQVGTDHAGIATQML-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++  +      +   E ++  + D+  Q+   I +  L+ L    D          G  +
Sbjct: 93  KVEAEEGKSRHDLGRETFIDRIWDWKNQSGGTITKQ-LRRLGASVDWDRERFTMDEGMSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYNDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|326519638|dbj|BAK00192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1046

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 66/235 (28%), Gaps = 44/235 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS + K       S   +  +         I     N TG +H+GH     + D +   
Sbjct: 89  SPSAVEKSWYPWWESSQYFVADAASSKPPFVIVLPPPNVTGALHIGHAITVAIEDAMIRW 148

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R ++                          
Sbjct: 149 RRMSGYNALWIPGMDHAGIATQVVVEKKIMRERKL------------------------- 183

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   +K+L  V ++  Q    I R  L+ L    D               +
Sbjct: 184 ------SRHDLGRDKFLSEVHNWKDQYGGTISRQ-LRTLGASLDWSRECFTMDEQRSEAV 236

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            +    L ++G +Y  I                     R+ +   +VDR  LK++
Sbjct: 237 TEAFVRLYKEGLIYRDIRLVNWD------------CTLRTAISDIEVDRVDLKAE 279


>gi|297617834|ref|YP_003702993.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145671|gb|ADI02428.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 825

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N     +   K  +    +G         K    ++E     P+G +H+GH R   +GD 
Sbjct: 6   NF---KTVEAKWQNFWEENGFYIVTEDKTKPKYYDLEMF-PYPSGNLHMGHVRNYAIGDV 61

Query: 150 LASLMAFSGYEV 161
           +A     +GY V
Sbjct: 62  VARFKTMNGYNV 73


>gi|294789076|ref|ZP_06754315.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482817|gb|EFG30505.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 927

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 60/332 (18%), Positives = 103/332 (31%), Gaps = 58/332 (17%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++ L    + ++ P      +QAM++      + R       +         + H     
Sbjct: 433 NNALKAVDDTEFFPAWGRARLQAMIEGRPDWVVSRQRFWGTPMALFAHKETGELHPNSAE 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   + ++G          KS+     D ++   L  +  V  D         GS 
Sbjct: 493 LLEKVAQKIEQKGI--NAWFELDKSELLSPEDCEQYDKLPDTMDVWFDS--------GST 542

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            Y        K + E      +Y+ GSD   G+ +       A   +     +L    V 
Sbjct: 543 HYSV-----LKQRDELAHPADLYLEGSDQHRGWFQSSMLTGCATLGRAPYKQLLTHGFVV 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 598 ---DQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAANTDYSGELAISKEILKRVTEI-- 652

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAE---- 504
                  Y R R+          D +      + IPQ    E D   L L   L E    
Sbjct: 653 -------YRRIRNTLSFLFANLKDFN---PIEDAIPQADMVEIDRYALVLARQLQEKLAG 702

Query: 505 --YP---------RVIENATIAQEPYKLAFYL 525
             YP          +++  +        AFYL
Sbjct: 703 EYYPRYAFHFAVQELVQFCSEDLG----AFYL 730


>gi|299821033|ref|ZP_07052921.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816698|gb|EFI83934.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 473

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 122/370 (32%), Gaps = 36/370 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+   + + GY+V    Y+++     + L      R  +
Sbjct: 29  CGPTVYNYIHIGNARPIIFFDTVRRYLTYRGYDV---NYVSNFTDVDDKLI-----RAAE 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L     ++ + +    +       +A   ++  +    ++ +  +     QA++     
Sbjct: 81  ELDLTVPEVADKFIHAFFEDVDQLNVARATTNPRVTENMQEIIDFI-----QALVDKGYA 135

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             ++    +      D + +    P++D          +  GI      K   + D    
Sbjct: 136 -YESAGDVYFATKKFDAYGKLSHQPLQD----------LQHGIRVETTDKKRDELDF--- 181

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +     + + P  K    +    + +A      ++   + I +    H       
Sbjct: 182 TLWKAAKPGEINWESPWGKGRPGWHIECSAMA------QKFLGDTIDIHAGGHDLIFPHH 235

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A    +  +       +   + +    KMSK  G+FITL  V+ E   D VRF ML
Sbjct: 236 EDEIAQSEARTGK-QFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLAEHAPDVVRFFML 294

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  +     +   +  +N +  ++ AY       + A++   D +        + +
Sbjct: 295 SVHYRNPI--SLSEDTLEDAKNSLERLRTAYQNIDYRIQHAEEDVADEETTEDWLEQLTE 352

Query: 488 ESEFDTSELQ 497
             +    E+ 
Sbjct: 353 LKQSFEDEMD 362


>gi|167836887|ref|ZP_02463770.1| valyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 955

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 63/233 (27%), Gaps = 49/233 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+  + + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D L       G+        + AG   QI                               
Sbjct: 65  DGLVRYHRMLGHNTLWVPGTDHAGIATQI------------------------------- 93

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +   D       +   EK++  V ++  Q+    I   ++ +    D        
Sbjct: 94  ---VVERQLDAQGVSRHDLGREKFVERVWEWKEQSG-STITGQVRRIGASPDWSREYFTM 149

Query: 266 HRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +      +R++   L  QG +Y G        +L    S      + +   L 
Sbjct: 150 NDRMSEVVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLW 202


>gi|164658017|ref|XP_001730134.1| hypothetical protein MGL_2516 [Malassezia globosa CBS 7966]
 gi|159104029|gb|EDP42920.1| hypothetical protein MGL_2516 [Malassezia globosa CBS 7966]
          Length = 1080

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 46/193 (23%), Gaps = 37/193 (19%)

Query: 100 KILSSIVVSGIEYGRNL-----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
              +     G    +               I     N TG +H+GH     + D L    
Sbjct: 123 SWYAWWEKKGFFTPKPPSDAAPYDPAKTFVIPLPPPNVTGLLHIGHALTISIQDALIRFY 182

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    T+                               V K LA
Sbjct: 183 RMKGYRTLYVPGFDHAGISTQTV-------------------------------VEKRLA 211

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   ++  E +L  V D+        I + ++ L    D               + 
Sbjct: 212 KVEQKSRYDYGREAFLQKVFDWK-DEYQARISNQMRRLGASFDFTREAFTMDASLSEAVT 270

Query: 275 DIIDNLARQGYVY 287
           +    L   G +Y
Sbjct: 271 ENFCKLFEDGILY 283


>gi|157960911|ref|YP_001500945.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082333|sp|A8H1H3|SYI_SHEPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157845911|gb|ABV86410.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 940

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 111/328 (33%), Gaps = 51/328 (15%)

Query: 223 NFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              + +W+P      ++ M++      I R     + I   +    ++ H    S +  +
Sbjct: 440 EIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMERV 499

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------GS 330
              + ++G                  D+D       S ++GD+ D+    +D       S
Sbjct: 500 AARIEQEG-------------IQAWWDLDA------SELLGDEADQYRKVTDTLDVWYDS 540

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
            + F++ +A          D  +Y+ GSD   G+      ++ A++ K     VL     
Sbjct: 541 GSTFSSVVAARPEFNGHPID--LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF- 597

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I  +HV +++G+D +R  +     S  +     ++  +S + 
Sbjct: 598 --TVDGQGRKMSKSVGNVIAPQHVTNKLGADILRLWVAATDYSGEMTVS-DQILNRSAD- 653

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                  AY R R+  R         + +     V    +        ++   A   + +
Sbjct: 654 -------AYRRIRNTARFLLANINGFNPETDMVAVEDMVALD----RWVVRRAAALQQEL 702

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHW 536
             A      + +   L    S      +
Sbjct: 703 LEAYDQYNFHLVTQKLMQFCSVELGSFY 730


>gi|113869000|ref|YP_727489.1| isoleucyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|122946626|sp|Q0K7A0|SYI_RALEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113527776|emb|CAJ94121.1| Isoleucyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 964

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 86/269 (31%), Gaps = 42/269 (15%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVGDDV 320
            H   P  + ++   + + G      L P +    +    ++      + F S       
Sbjct: 510 LHPRTPQLLEEVARRVEQHGIEAWQTLDPAELLGDEASQYEKNRDTLDVWFDS------- 562

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM------IYVMGSDHS-GYVKRLEAVAAA 373
                   G+  +     ++    Y+   D        +Y+ GSD   G+       A+ 
Sbjct: 563 --------GTTHWSVIRGSHRDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASM 614

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +  K     +L         DG   KMSK  G+ ++ + + +++G++ +R  +     S 
Sbjct: 615 LYGKPPYKALLTHGF---TVDGEGRKMSKSIGNTVSPQDISNKMGAEIIRLWVASTDYSG 671

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            L      +K   +          Y R R+  R       D D          +  E D 
Sbjct: 672 ELSISDEILKRVVEG---------YRRIRNTLRFLLSNLSDYDHARHALPA-SEWLEIDR 721

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLA 522
             + L   L +   V+ +   A E + + 
Sbjct: 722 YAVALTAQLQK--EVLSH-YEAYEFHPVV 747


>gi|56416893|ref|YP_153967.1| glutamyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56388125|gb|AAV86712.1| glutamyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 516

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 90/310 (29%), Gaps = 56/310 (18%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +   + G      I   + +PTG +H+G  R A+     A                   G
Sbjct: 41  HPAWVCGAEIVRVITRFAPSPTGSLHLGGARTALFNWLFARR----------------HG 84

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q          R +       S+          ++ +           ++     +   
Sbjct: 85  GQF-------LLRMEDTDQERSSETVAQSI----IEDMAWLGLHHDQDVVIQSARRERHT 133

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF------HRGDPSPIRDIIDNLARQGY 285
            V             ++L A    +  + SEDD       H  +    R    +     +
Sbjct: 134 QVA------------EELLARGKAYYCYCSEDDIAAEKLRHENEGKHYRHHCPS-RDANH 180

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKC 343
              G     + K+ +  ++     ++    V  +   D  +L+S+G  TY    LA    
Sbjct: 181 AQSGTAGVLRLKSPENREIKFTDGVYGEISVSSEQIDDMVILRSNGHPTYL---LAVVVD 237

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            ++    ++I   GSDH     +   +A A+     Q   +    +     G  +    R
Sbjct: 238 DHDMCITHIIR--GSDHITNTIKQMLLAEAMGWDNPQFCHI---PLIHDEGGAKLSKRNR 292

Query: 404 AGDFITLRHV 413
           A      R +
Sbjct: 293 APGVHEYREL 302


>gi|17864482|ref|NP_524838.1| Valyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|24653289|ref|NP_725259.1| Valyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|7303353|gb|AAF58412.1| Valyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|21627263|gb|AAM68598.1| Valyl-tRNA synthetase, isoform B [Drosophila melanogaster]
          Length = 1049

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 58/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S       +                K  +     N TG +H+GH     +
Sbjct: 95  SPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGKFVMIIPPPNVTGSLHLGHALTNAI 154

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 155 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 196

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I + LK+L   +D         
Sbjct: 197 -------------SRHDLGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWTRVAFTMD 242

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 243 PKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 281


>gi|87123001|ref|ZP_01078860.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161718|gb|EAQ63024.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 940

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 41/242 (16%)

Query: 296 SKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------GSYTYFAADLAYFKCK 344
            +  ++ + +     F    + ++GDD D+    +D        G   Y   D      +
Sbjct: 497 EEVAKRIEKEGIDAWFDLDAAEILGDDADKYSKVTDTLDVWFDSGVTHYSVID-----QR 551

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            E  F   +Y+ GSD   G+ +     + AV        VL         DG   KMSK 
Sbjct: 552 DELSFPADLYLEGSDQHRGWFQSSLKTSIAVRGVAPYKQVLTHGF---TVDGDGRKMSKS 608

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ ++ + V++ +G+D +R  +     +  +     ++ ++  +        +Y R R+
Sbjct: 609 LGNVLSPQKVMNSLGADIIRLWVAATDYTTEMTVS-DEILKRVAD--------SYRRIRN 659

Query: 464 IFR----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             R          P  D  + P +++  +S       QL   + +       A    + +
Sbjct: 660 TARFMMANLNGFDPVTDM-VAPADMLSLDSWVVDRAAQLQKEIDQ-------AYNDYQFH 711

Query: 520 KL 521
            +
Sbjct: 712 TV 713


>gi|319949127|ref|ZP_08023219.1| valyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437199|gb|EFV92227.1| valyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 878

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 66/214 (30%), Gaps = 30/214 (14%)

Query: 370 VAAAVSEKKAQINVLLCELV---RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           V   +   KA    +    V    L RD    KMSK  G+ I     VD  G+D++RF  
Sbjct: 487 VGRRLGGDKAAPGTVPFTDVFLHGLVRDEHGQKMSKSKGNGIDPLDWVDRFGADALRFT- 545

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L R      D        Q+  N                 +  +       +      +P
Sbjct: 546 LARGAHPGGDLSVGDDSAQASRN--------------FATKLFNATRFALMNGAKVGPVP 591

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE--NPR 544
             ++   ++  ++  L +    ++ A    E  K         +++H  W    +     
Sbjct: 592 DAADLTDADRWILHRLGQVRETVDEALERYEFSKACE------ALYHFAWDEVCDWYLEL 645

Query: 545 LRFVQANNRKLTMM-RLQLVHAVASIINSGLNII 577
            +    N+ +     R         ++   L+++
Sbjct: 646 AKVQFGNDDESRASER---AERTRLVLGHVLDVL 676



 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 100/342 (29%), Gaps = 47/342 (13%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   L    V    +  +        ++     N TG +H+GH     + D L       
Sbjct: 1   MEAELYQRWVDAGYFEADASSGKPAYSVVLPPPNVTGSLHMGHALDHTLMDVLTRRRRMQ 60

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GYEV            ++   ++      + L +           G+    +G+      
Sbjct: 61  GYEVL-------WLPGMDHAGIATQTLVDRKLRDE----------GIDRHEIGR------ 97

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                    E ++  V ++  ++    I + ++ L    D          G    ++ I 
Sbjct: 98  ---------EAFIEKVWEWKRESG-GTIGEQMRRLGDGVDWSRERFTLDDGLSRAVQTIF 147

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLFRSTMVGDDVDRPLLKSDG 329
             L  QG +Y        S T Q    D          +L+       DD +  L+ +  
Sbjct: 148 KELYDQGLIYRAERLVNWSPTLQTAISDIEVKYSDVEGELVSFRYGSMDDSEPHLVVATT 207

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL- 388
                  D A      +  + ++   +G++   +  R       V++           + 
Sbjct: 208 RLETMLGDTAVAVHPDDERYAHL---VGTE-IPHPFRDGWTMRVVADDYVDPEFGTGAVK 263

Query: 389 VRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVRFMMLWR 429
           V    D     + +R G +  T+      +     R+  + R
Sbjct: 264 VTPAHDPNDFAIGQRHGLEMPTIMDATGHITGTGTRYDGMDR 305


>gi|329903782|ref|ZP_08273614.1| Isoleucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548213|gb|EGF32915.1| Isoleucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 962

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 72/218 (33%), Gaps = 25/218 (11%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-------GSYTYFAADLAYFKC 343
           L    ++  +   +D    +    ++GD+ D+ +   D          T+          
Sbjct: 522 LLEQIARRVEVAGIDAWLTIEPKDLLGDEADQYIKNKDTLDVWFDSGTTHQTVLRGSHAQ 581

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                 D  +Y+ GSD   G+       ++ ++       +L    V    DG   KMSK
Sbjct: 582 SSHFPAD--LYLEGSDQHRGWFHSSLLTSSMLNGCAPYKTLLTHGFVV---DGEGKKMSK 636

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +  + V D +G+D +R  +     S  L      +K  ++         +Y R R
Sbjct: 637 SVGNVVAPQKVADSLGADILRLWVGSTDYSGELSISDEILKRVTE---------SYRRIR 687

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +  R       D +      + +P     +     L  
Sbjct: 688 NTLRFLLANTSDFN---AATDAVPVADLLEVDRYALAR 722


>gi|323496135|ref|ZP_08101195.1| valyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323318879|gb|EGA71830.1| valyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 952

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQAWEEKGYFKPHGDTSKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +  +Y G               D +
Sbjct: 152 AVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|315638284|ref|ZP_07893465.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481631|gb|EFU72254.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 808

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K       S     ++      K  +      P+G +H+GH R   +GD LA      G
Sbjct: 10  QKWQKIWQESEAFEPKDDFTLPKKYILSMF-PYPSGRIHMGHVRNYAIGDALARYYRKMG 68

Query: 159 YEV 161
           + V
Sbjct: 69  FNV 71


>gi|317131687|ref|YP_004091001.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469666|gb|ADU26270.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 925

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IY+ G+D   G+ +     + A         V+   +V    DG   KMSK  G+ I   
Sbjct: 559 IYLEGNDQYRGWFQSSLLTSIAWKGVAPYKMVITHGMVV---DGEGRKMSKSLGNGIAPG 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +V + G+D +R  +        +      +K+ S+          Y + R+  R     
Sbjct: 616 DIVKKFGADILRLWVASSDYQGDVRVSDNILKQLSE---------VYRKIRNTARYILGN 666

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D     ++ +  ++     +   +  L E  + +  A    E + +
Sbjct: 667 TSDFD---PQKDAVAFDALLPIDKWA-VWRLDELQKTVVTAYEHYEFHTI 712


>gi|317154515|ref|YP_004122563.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944766|gb|ADU63817.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 833

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 64/213 (30%), Gaps = 16/213 (7%)

Query: 94  SPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            P  + +        SG         +     +E     P+G +H+GH R   +GD +A 
Sbjct: 7   DPQAVERKWQRIWQESGCFEVEVDPSRPKYYVLEMF-PYPSGKIHMGHVRNYSIGDVVAR 65

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPGVYLKH 208
             +  G+ V      +  G      A+          Y N +++ E      Y   + + 
Sbjct: 66  FKSMQGFNVLHPMGWDAFGLPAENAAIKHGVHPAAWTYQNIAEMREQLQRLGYSYDWRRE 125

Query: 209 VG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH-DIFISEDD 264
           +     E         L F E+      + +S Q         L    ++    +  + +
Sbjct: 126 IASCRPEYYKWEQKFFLKFLEKGL--AYRKHSPQNWCPDCNTVLANEQVEDGKCWRCDSE 183

Query: 265 FHRGDPS----PIRDIIDNLARQGYVYEGILPP 293
             + D       I D  D L       EG  P 
Sbjct: 184 VEQKDMEQWFLRITDYADELLADLDSLEGGWPE 216


>gi|194290340|ref|YP_002006247.1| valyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|193224175|emb|CAQ70184.1| valine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 955

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 68/241 (28%), Gaps = 40/241 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        GI        +     I+    N TG +H+GH     + D LA      G
Sbjct: 19  AKWGPEWEKRGIAKPTFDPARPD-FAIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMLG 77

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                    + AG   QI      V  R  +               GV    +G+E   K
Sbjct: 78  ANTLWVPGTDHAGIATQI------VVERQLEG-------------QGVSRHDLGRE---K 115

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           ++ ++  + EE    I +              ++ +    D               + ++
Sbjct: 116 FTEKVWAWKEESGSTITRQ-------------VRRMGASIDWSREYFTMSPEMSKAVTEV 162

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--GSYTYF 334
              L  QG +Y G               D +            +  PL+++D  G  T+ 
Sbjct: 163 FVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVEEEGSLWHIRYPLVEADAKGGLTHL 222

Query: 335 A 335
            
Sbjct: 223 T 223


>gi|165918823|ref|ZP_02218909.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917455|gb|EDR36059.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 936

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 68/213 (31%), Gaps = 26/213 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    +  WLP   +  +  M        I R  L  + I   I     + H   P+
Sbjct: 433 ERALAEIEKVTWLPAWGEARIGKMVADRPDWCISRQRLWGIPIPLFIHKKSGELHPKSPA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L  +  V       PK       D   K                    D   
Sbjct: 493 LMEK-VAQLIEKESVDAWFDLDPKVLLGDDADHYEKVTDVLDVWF-----------DSGV 540

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F       + + E      IY+ GSD   G+ +     + A+ +K    +VL    V 
Sbjct: 541 THFCV----LEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVV 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              D    KMSK  G+ I    VV  +G+D +R
Sbjct: 597 ---DSQGRKMSKSLGNVILPADVVKNLGADVLR 626


>gi|119476407|ref|ZP_01616758.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450271|gb|EAW31506.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 921

 Score = 44.9 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 66/239 (27%), Gaps = 37/239 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS +         S   +  +  G+G   +I     N TG +H+GH     + D L 
Sbjct: 4   TFQPSEIEASWYKHWESEGYFAPS--GEGEPYSIMIPPPNVTGSLHMGHGFQETIMDVLI 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                                 +
Sbjct: 62  RYHRMKGDNTLWQVGTDHAGIATQMVV--------------------------------E 89

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    +      EK++  V D+  Q+    I   L+ +    D          G  +
Sbjct: 90  RQLEAEGIDRKKLGREKFIEKVWDWKEQSG-GTITQQLRRMAASTDWSRERFTMDPGLSA 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            ++++   L  +G +Y G               D + +             PL  SDGS
Sbjct: 149 AVKEVFIKLYDEGLIYRGTRLVNWDPVLHTAVSDLEVVSEEENGFLWHFHYPL--SDGS 205


>gi|332674353|gb|AEE71170.1| leucine--tRNA ligase [Helicobacter pylori 83]
          Length = 661

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|284161561|ref|YP_003400184.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011558|gb|ADB57511.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 474

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 115/355 (32%), Gaps = 52/355 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D L   + + G+EV                       Y Q   + D  +
Sbjct: 39  HIGHARTFVFFDVLRRYLEYEGHEVI----------------------YVQNFTDVDDKI 76

Query: 197 PEGYYP-GVYLKHVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                  G   K + ++   ++  ++  LN     ++P V D+    +  + +  L  L 
Sbjct: 77  VRRAVNEGKTQKEIAEKFISEFLKDMSALNVKMPDYMPKVTDHIQDIVQAVQK--LIELG 134

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
             +++   E++  +     +          G   E +         +K D+    L  +S
Sbjct: 135 YAYEV---ENEHGKDVYFHVPAFESYGKLSGMSLEELNRHRIEPNPKKRDVKDFALW-KS 190

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLE-- 368
               D   + +  S   Y      +       +     FD    + G          E  
Sbjct: 191 AKEDDFKAKAVFDSPWGYGRPGWHIECSVMSAKYLGVPFD----IHGGGKDLIFPHHENE 246

Query: 369 --AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
                A    +  +  +  C+ V +       KMSK  G+ + +R V++  G + +R+ +
Sbjct: 247 RAQSYALFGVEPVRYWI-HCDFVMI----KGEKMSKSLGNIVKIRDVLNVYGGEVLRYFL 301

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR---SIFRQAKDIFPDLDFD 478
           L       LD+    +  +  +N   Y++          S  +   +   D+ FD
Sbjct: 302 LTAFYRSPLDYSEKSL--ERAKNSYNYLKNTLINLDMEISALKSYGEDRKDMGFD 354


>gi|225851438|ref|YP_002731672.1| glutamyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225644923|gb|ACO03109.1| glutamyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 478

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 90/284 (31%), Gaps = 38/284 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A              +          L L +    ++ 
Sbjct: 7   APSPTGYLHLGNARTALFNYIYAR-------------HTG------GKLILRIEDTDRER 47

Query: 189 LYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 DL       + ++   G ++   Y     +   + +   V+       +     
Sbjct: 48  SKKEYEDLLIDDLKWLGIEWDEGPDIGGDYGPYRQSERTDIYNQYVEKLKESGHIYKCFC 107

Query: 248 DLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             + L  +    +SE     +     +   D I  L  +G  Y      P  +     D+
Sbjct: 108 SPEELEEERKKALSEGRPPRYSGKCRNLTEDQIKKLESEGKPYVWRFRVPDGEFIIFEDV 167

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGY 363
            +  +       GD     +++SDGS  Y       F    +     +  V+ G DH   
Sbjct: 168 IKGTVEINVDEFGDF---VIVRSDGSPVYN------FVVVVDDALMKITDVIRGEDHLSN 218

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +   +  A+  ++ +   L    + L  D    K+SKR G  
Sbjct: 219 TPKQILIYRALGFEEPRFAHL---PIILGED--RSKLSKRHGAV 257


>gi|171910094|ref|ZP_02925564.1| valyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 887

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 53/383 (13%), Positives = 112/383 (29%), Gaps = 61/383 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV--SANPTGPMHVGHCRCAVVGDTLA 151
           S     +  +  +  G            +     V    N TG + +GH     + D LA
Sbjct: 10  SNEVEERWYAQWLERGCFTADPARVSDKRPAYSIVIPPPNVTGILTLGHVLNNTIQDILA 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                           ++ L+   +D        V  K + K
Sbjct: 70  RRARMLG---------------------------KEVLWLPGTDHAGIATQNVVEKTLKK 102

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           + A K+     +   EK +  + ++  +    II   L+AL    D   +          
Sbjct: 103 DGAIKHRD---DLGREKMVEKIWEWK-EKFGGIILKQLRALGASCDWSRTRFTMDEEYSK 158

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +  +L  +G +Y G        +      D +  + +           +++  G++
Sbjct: 159 CVTKVFVDLYNKGLIYRGKRMVNWCPSALTALSDEEVEMRQQNGHLYYFKVEVVEEPGTW 218

Query: 332 TYFAA--------DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
              A         D A      +  + ++I         +V+R   +           + 
Sbjct: 219 LTIATTRPETIPGDTAIAVSPKDERYAHLI-------GKHVRRPLPLENQAGIPIVADDH 271

Query: 384 LLCEL------VRLYRDGMPIKMSKRAG----DFITLRHVVDEVGSDSVR---FMMLWRK 430
           +  +       V    D    ++ +R      D +     ++++    ++        +K
Sbjct: 272 IDPQFGTGVLKVTPAHDKADFEIGQRHNLPQIDIMNPNASMNDLAGKDLQGLDRFEARKK 331

Query: 431 NSELLDFDFCKVKEQSKENPVFY 453
             ELL      VKE+  +N V Y
Sbjct: 332 AVELLREMGDLVKEEPYQNNVGY 354


>gi|163854077|ref|YP_001642120.1| glutamyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|238687363|sp|A9W910|SYE1_METEP RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|163665682|gb|ABY33049.1| glutamyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 474

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 90/289 (31%), Gaps = 40/289 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A    F G  + R     D          ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR--RFGGRMLLRIE-DTDRERSTQGAIDAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    + D ++   +      + V + L     +    +   + L  +++ +     
Sbjct: 61  DGMRWLGLDWDGEVIYQFARAERHREVAESLLAS-GNAYHCYASAEELAQMRETARAEGR 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               D         D   SE       P  ++ +I            +  P + +T  + 
Sbjct: 120 APRYD-----GRWRDRDPSEA------PEGVKPVI-----------RLRAPSEGETVVED 157

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +  +          D  D  LL+SDG+ TY    LA     ++ G   +I   G DH  
Sbjct: 158 AVQGRVTW----ANRDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQVIR--GDDHLT 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+      +       + L       K+SKR G      
Sbjct: 209 NAARQSQIYRALGWDVPAMAH-----IPLIHGADGAKLSKRHGALGVEE 252


>gi|149190549|ref|ZP_01868819.1| valyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835673|gb|EDL52640.1| valyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 952

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYKTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|15292509|gb|AAK93523.1| SD04748p [Drosophila melanogaster]
          Length = 1049

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 58/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S       +                K  +     N TG +H+GH     +
Sbjct: 95  SPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGKFVMIIPPPNVTGSLHLGHALTNAI 154

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 155 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 196

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I + LK+L   +D         
Sbjct: 197 -------------SRHDLGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWTRVAFTMD 242

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 243 PKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 281


>gi|260753439|ref|YP_003226332.1| glutamyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552802|gb|ACV75748.1| glutamyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 481

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 93/282 (32%), Gaps = 40/282 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A     +G +        D          ++  
Sbjct: 11  VVTRFAPSPTGFLHIGGARTALFNWLFAR---HNGGQFQLRIEDTDRVRSTKEAIDAIID 67

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +    + D D+   +        V +EL  K       F   + L  ++    +A  +
Sbjct: 68  GMRWLGLDWDGDITYQFERAPRHAEVAEELL-KAGKAYKCFATAEELEAMRAE-QRAKKQ 125

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R D        D   SE                  A  G  Y   L   +   T   D
Sbjct: 126 PQRYD----GRWRDRDPSE------------------APAGAPYVVRLKAEQEGETTLHD 163

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + +  +  ++  +    D  LL+SDG+ TY    LA     ++ G +++I   G DH   
Sbjct: 164 LVQGDVTVKNAELD---DMILLRSDGTPTYM---LAVVVDDHDMGVNHVIR--GDDHLNN 215

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             R   +  A++    Q        + L       K+SKR G
Sbjct: 216 TFRQLGIIRAMNWDAPQ-----YAHIPLIHGADGAKLSKRHG 252


>gi|218247996|ref|YP_002373367.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226695252|sp|B7JYA9|SYL_CYAP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218168474|gb|ACK67211.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 856

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K     V  G++       K     +      P+G +H+GH R  V+ D +A L    G
Sbjct: 12  QKWQQDWVKQGLDKTPENSNKPKFYALSMF-PYPSGNLHMGHVRNYVITDVIARLKRLQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YRV 73


>gi|39937437|ref|NP_949713.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81619265|sp|Q6N1M8|SYI_RHOPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39651296|emb|CAE29818.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 1005

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 22/178 (12%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            +I++    + ++ EG          ++   DR    +R     DD+      S  ++ +
Sbjct: 544 DEIVNQRIAEAFMQEGADAWYAEGAAERFLGDRAAEGWRKV---DDILDVWFDSGSTHAF 600

Query: 334 FAAD------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLL 385
              D      LA  + K + G D ++Y+ GSD   G+      +  +   + +A  +V+L
Sbjct: 601 VLEDAQNFPGLAGIRRKVDGGADTVMYLEGSDQHRGWFHSS--LLESCGTRGRAPYDVVL 658

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLD 436
                L   G   KMSK  G+      V+   G+D +R       +    R   E+L 
Sbjct: 659 THGFTLDEQGR--KMSKSLGNTTDPAKVIASSGADILRLWVCATDYADDQRIGPEILK 714


>gi|257060679|ref|YP_003138567.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590845|gb|ACV01732.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 856

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K     V  G++       K     +      P+G +H+GH R  V+ D +A L    G
Sbjct: 12  QKWQQDWVKQGLDKTPENSNKPKFYALSMF-PYPSGNLHMGHVRNYVITDVIARLKRLQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YRV 73


>gi|330969239|gb|EGH69305.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 948

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +    +G    + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     L      R  +A   +  +L                  
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL------------------ 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       EK+L  + ++  ++   I R  ++ L    D          G    ++
Sbjct: 103 ----------GREKFLDKIWEWKPESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|312135070|ref|YP_004002408.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775121|gb|ADQ04608.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 817

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFKEIEKKWQQKWFSQN-----KYKVSEDSPKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 482

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 74/448 (16%), Positives = 142/448 (31%), Gaps = 75/448 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  D +   +   GY VT      D   +I   A       ++  ++  ++ 
Sbjct: 40  HMGNARPFVTWDVIKRYLKHLGYAVTHIQNFTDVDDKIINAANG-----EEVSWDTIANR 94

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y  V  K +  + ADKY     +  +           + AM+  + ++  A  +  
Sbjct: 95  YIASYFEVMDK-LHIQRADKYPRVSEHMDD-----------IIAMISKLIENGHAYELDG 142

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        R + D +A       G       +     D     L   +   
Sbjct: 143 DVYYRVQSFEHYGELSHRSLDDMMA-------GARIEVDDRKENPMDF---ALWKAAKPS 192

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVA 371
               D P  K  G   +     A         FD      GSD     H   + + EA  
Sbjct: 193 EPSWDSPWGK--GRPGWHIECSAMSLKYLGEPFDFHG--GGSDLIFPHHENEIAQTEACC 248

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
                    +         +  D    KMSK   +F  ++ V++    D++R+ ++    
Sbjct: 249 -----NHGPMVNYWVHNGFITIDSE--KMSKSLNNFFLVKDVLEHYSPDALRYFLISNHY 301

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
              LDF   ++ E ++   +  +  A      +  Q      +L   L        E +F
Sbjct: 302 RSPLDFSDERLTEMTRS--LERLGTAIDNTLWLLEQPSGGKSELSAALLADAQRTME-DF 358

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551
           +T+         ++   + +A            +++LA   + +            V A+
Sbjct: 359 ETA------MCDDFNTALASAA-----------MFELAKKVNIY----TSEVSTNGVPAD 397

Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGV 579
           +  L+         V  I  +  +I+GV
Sbjct: 398 SAVLSE--------VKRIFKTMTDILGV 417


>gi|152973135|ref|YP_001338281.1| valyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150957984|gb|ABR80014.1| valyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 951

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|123477120|ref|XP_001321729.1| Valyl tRNA Synthetase [Trichomonas vaginalis G3]
 gi|121904561|gb|EAY09506.1| Valyl tRNA Synthetase, putative [Trichomonas vaginalis G3]
          Length = 756

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 13/176 (7%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     S   +   +      K   + +     N TG +H+GH   A + D +   
Sbjct: 54  NPMKVENAWYSWWENQNFFEPKAADKKFVMIL--PPPNVTGELHLGHALTASIEDAITRY 111

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E       + AG       ++  +R ++ +Y+    L  G Y   Y      + 
Sbjct: 112 HRMCGEESLWVPGTDHAG-------IATQFRVEKKIYDEK-KLHRGEYSREYFLEEAHKW 163

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +  S  +L+   +    +    +   + +   + + A          E   +R +
Sbjct: 164 VESKSGTILSQLRDMGSSLAWKDTYYTLDEKRSESVIA---AFIKLFDESLIYRSE 216


>gi|115522418|ref|YP_779329.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|123126891|sp|Q07UN5|SYL_RHOP5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115516365|gb|ABJ04349.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 888

 Score = 44.9 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I   +N   +     +E     P+G +H+GH R   +GD +A  M   G+
Sbjct: 14  KWQRRWDDDKIFATQNDDPRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARTMRARGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|329113498|ref|ZP_08242279.1| Valyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697323|gb|EGE48983.1| Valyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 920

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 54/201 (26%), Gaps = 33/201 (16%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N    P+ +   L  +  S   +            I     N TG +H+GH     + D
Sbjct: 25  LNKSFEPAQIETRLYELWESRKAFSAQPNSGKKPFTIMIPPPNVTGTLHMGHALTMTLQD 84

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G++   +   + AG     +                               
Sbjct: 85  TLIRWKRMQGFDTLWQPGTDHAGIATQMVVERTLA------------------------- 119

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                             + ++  V ++  Q+   I +  L+ L    D          G
Sbjct: 120 -------TEGKTRQEMGRDAFIERVWEWKEQSGGGITKQ-LRRLGSSLDWPRERFTMDEG 171

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               +R++   L  +G +Y  
Sbjct: 172 LSRAVREVFVTLYNEGLIYRD 192



 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 23/117 (19%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   ST+   D    L +      Y+  D+         GFD +I+         V R+
Sbjct: 499 ALWPFSTLGWPDKTPELAR------YYPTDV------LVTGFD-IIFFW-------VARM 538

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             +           N+ +  LV   RD    KMSK  G+ I    ++D+ G+D++RF
Sbjct: 539 MMMGQHFMHDVPFRNIFIHGLV---RDEHGQKMSKSKGNGIDPLELIDQYGADAMRF 592


>gi|319783483|ref|YP_004142959.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169371|gb|ADV12909.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 516

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 96/322 (29%), Gaps = 31/322 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-------NTLALSVFWR 184
           P G  H+GH    +  D LA      G +V      ++ G ++           L++  R
Sbjct: 15  PNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTAEKEGITPLALADR 74

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQ 239
                      +  G     Y++       +   +          + +           +
Sbjct: 75  NSAIFRAMTEAM--GGSNDQYIRTTEPRHYESCQAIWKAMAANGDIYLDRYSGWYSVRQE 132

Query: 240 AMMKIIRDDLKALNIQHDIFIS-----EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           A        L    ++ +   S     E++ +    S  +D +  L      + G     
Sbjct: 133 AYFDESETTLGDDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQPDFVGPTERR 192

Query: 295 KSKTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
               +      +   + R+T      + GDD     +  D    Y  A   Y   K E+ 
Sbjct: 193 NEVLSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITA-AGYPDTKAEQW 251

Query: 349 FDN-MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                 +++G D    + R  AV        A I +        +      KMSK  G+ 
Sbjct: 252 HYWPATHIIGKD----IVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKMSKSVGNV 307

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +    +V+  G D VR+  L  
Sbjct: 308 VDPFAMVEHYGLDQVRYFFLRE 329


>gi|289548809|ref|YP_003473797.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182426|gb|ADC89670.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 1144

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 87/247 (35%), Gaps = 31/247 (12%)

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL+  Y       GFD +I+   +     V         +  +   I+        L 
Sbjct: 729 TKDLSELYPTDLLVTGFD-IIFFWVAR---MVMMGMHFMKDIPFRDVYIH-------ALV 777

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    ++++ G+D++RF  L     +  D    + + +       
Sbjct: 778 RDEKGQKMSKTKGNVIDPLDIIEKYGADALRFT-LSILTQQGRDIKLSEKRFEG------ 830

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
              Y +     ++  A+ +  +L  DL     +     ++   L +   L E  + +  A
Sbjct: 831 ---YKHF-ANKLWNAARFVLMNLQEDLLANLPMCAPPRWED--LWITTLLNETVKEVNEA 884

Query: 513 TIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV-ASII 570
               +  +    +YD   S F   +     +    + +  +  +   +L    A    ++
Sbjct: 885 LERYDFSRACQKIYDFVWSEFCDWY--IEMSKIRLYAEGEDPSVKGEKLT-AQATLLRVL 941

Query: 571 NSGLNII 577
           ++ L ++
Sbjct: 942 DTVLRLL 948



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 33/177 (18%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +      + ++     N TG +H+GH     + D L       G  V             
Sbjct: 27  SDTESSQRFSVVIPPPNVTGSLHMGHALNVTLQDVLCRWNRMRGKRVV------------ 74

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                                +P   + G+  ++V      +          E++L  V 
Sbjct: 75  --------------------WVPGFDHAGIATQYVVDRQLQQEGKSRFQIGREEFLKKVW 114

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           ++   +    I++ L  +    D          G    +R     L  +G +Y G  
Sbjct: 115 EWVPIS-RDSIKNQLIRMGASVDWRRERFTLDEGFSRLVRYAFRKLYEEGLIYRGEY 170


>gi|261749277|ref|YP_003256962.1| valyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497369|gb|ACX83819.1| valyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 878

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 64/219 (29%), Gaps = 34/219 (15%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           I +   P  +   +    +    Y  +L GK     I     N TG +H+GH     + D
Sbjct: 3   IPIKYDPKSVENRIYHHWMR-ENYFFSLPGKKPPYTILMPPPNITGVLHIGHILNNTIQD 61

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G               ++  +++   +    L             G+    
Sbjct: 62  ILIRYARMKGSNPC-------WIPGMDHASIATEAKVVHQLKE----------KGLSKIL 104

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           +G+E    + SE                  +    II + LK L    D    +   ++ 
Sbjct: 105 IGREKFLLHVSEWS----------------EKHKNIILNQLKKLGCSCDWNRVQFTMNKK 148

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
               +  I  +L  +GY+Y G          +    D +
Sbjct: 149 LSKSVTKIFIDLYEKGYIYRGYRVVNWDPEAKTTISDEE 187


>gi|256371993|ref|YP_003109817.1| isoleucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008577|gb|ACU54144.1| isoleucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 1072

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 342 KCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
           K ++E  F  D ++  +G    G+   L  +A A+ ++       +   + L  DG   K
Sbjct: 565 KERFEANFPADFIVEYVG-QTRGWFYTLHVLAVALFDRPP-FRHCIAHGIVLGNDGR--K 620

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           +SKR  ++     V +E+G+D++R+ +L 
Sbjct: 621 LSKRLRNYPDPWEVFEEIGADAMRWFLLS 649


>gi|225852500|ref|YP_002732733.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256113542|ref|ZP_05454368.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264009|ref|ZP_05466541.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|265994915|ref|ZP_06107472.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|225640865|gb|ACO00779.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|262766028|gb|EEZ11817.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263094153|gb|EEZ18075.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409016|gb|ADZ66081.1| methionyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538726|gb|ADZ86941.1| methionyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 515

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|242278147|ref|YP_002990276.1| glutamyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121041|gb|ACS78737.1| glutamyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 464

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 95/287 (33%), Gaps = 51/287 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA                +D G  +  +  +   R +Q 
Sbjct: 9   APSPTGHLHIGGARTALFAWLLAK---------------HDGGDFVLRIEDTDRERSKQE 53

Query: 189 LYNNDSD----LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             +   D    L   +      +    +L + Y  +LL+  +  W        V AM + 
Sbjct: 54  YTDAILDSMKWLGMDWNDEPVYQSDRFDLYNGYIDQLLDEGKAYWCD-CTPEQVDAMRE- 111

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            +   +    ++D    E +   G+   +R                   P    T   DM
Sbjct: 112 -KAMKEKRKPKYDGSCREKNLGPGENRVVR----------------FKAPLEGRTNFTDM 154

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            +  +   S    +  D  L +SDGS TY   +LA     +  G  +++   G DH    
Sbjct: 155 IKGPI---SVENAEMDDMILRRSDGSPTY---NLAVVVDDHTMGVTSVLR--GDDHVNNT 206

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            R   +  A+     +        V +       K+SKR G    + 
Sbjct: 207 PRQILLYQALGWDVPKFGH-----VPMILGPDKKKLSKRHGALSVME 248


>gi|15606482|ref|NP_213862.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|7388279|sp|O67298|SYM_AQUAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78101749|pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101750|pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101753|pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|78101754|pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|2983692|gb|AAC07256.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 497

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 123/375 (32%), Gaps = 45/375 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    +  DT+A       Y+V      ++ G +I   A  +    ++ +  N    
Sbjct: 21  HLGHAYTTIAADTIARYYRLRDYDVFFLTGTDEHGLKIQKKAEELGISPKELVDRNAERF 80

Query: 197 PE--GYYPGVY-----------LKHVGKELADKYSSELLNFPE-EKWLPI-VKDYSVQAM 241
            +   +    Y           +K V K   + Y    +   E E W  +  +++  +A 
Sbjct: 81  KKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIYLGEYEGWYCVGCEEFKSEAE 140

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--------EGILPP 293
           +         ++ +   +I E  +        +D +  L  +   +        E I   
Sbjct: 141 LAEDHTCP--IHQKKCEYIKEPSYFFRLS-KYQDKLLELYEKNPEFIQPDYRRNEIISFV 197

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +          R ++ +   +  D      +  D  + Y    ++  + K E  +   +
Sbjct: 198 KQGLKDLSVTRPRSRVKWGIPVPFDPEHTIYVWFDALFNY----ISALEDKVEIYWPADL 253

Query: 354 YVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +++G D    H+ Y     A   ++  +  +            +     KMSK  G+ + 
Sbjct: 254 HLVGKDILRFHTVY---WPAFLMSLGYELPKKVFAHGWWTVEGK-----KMSKTLGNVVD 305

Query: 410 LRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467
              VV E G D VR+ +L      +  DF    +  +        +   Y+R  ++  + 
Sbjct: 306 PYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNRINGELANEIGNLYSRVVNMAHKF 365

Query: 468 -AKDIFPDLDFDLFP 481
              ++    D +   
Sbjct: 366 LGGEVSGARDEEYAK 380


>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22257048|sp|Q8R7T3|SYC_THETN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 467

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 56/407 (13%), Positives = 118/407 (28%), Gaps = 68/407 (16%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              K   VN+          +H+G+ R  +V DT+   + + GY      Y+ +      
Sbjct: 15  KPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY---TVNYVQN----FT 67

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R ++                   K + +   ++Y  +      +     V  
Sbjct: 68  DIDDKIINRAKEENTTE--------------KEIAERFIEEYFKDADALGIK--RATVHP 111

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + + +  II         +    + +  +       +          G +    +    
Sbjct: 112 RATEHIDDII---------EFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELM 162

Query: 296 SKTTQKCDMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGF 349
           +    + D  +K      L           D P  K    +    + ++  +  K     
Sbjct: 163 AGARVEIDEKKKNPLDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIH 222

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAA-VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                ++   H   + + EA      S+    I  L         +    KMSK  G+F 
Sbjct: 223 AGGPDLIFPHHENEIAQSEAAYDQPFSKYWMHIGYL---------NVNNEKMSKSKGNFF 273

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R + ++   + +R  ML       ++F    + +                     + A
Sbjct: 274 TVRELTEKYDPEVLRLFMLMAHYRSPINFSLDLLDQA--------------------KSA 313

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
            +   +   +L     I ++ E    E  LIV   EY +  E A   
Sbjct: 314 YERLSNAVVNLKHLANITKDRELSDEEKDLIVKFDEYKKQFEEAMDD 360


>gi|332530956|ref|ZP_08406880.1| valyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332039644|gb|EGI76046.1| valyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 1000

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 69/239 (28%), Gaps = 37/239 (15%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G+              I+    N TG +H+GH     + D+L       G+       
Sbjct: 37  KAGVRGTGQPQVNAPSFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGHNT----- 91

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
                                 L+   +D        V  + + ++   ++     NF  
Sbjct: 92  ----------------------LWVPGTDHAGIATQIVVERQLQEQKVSRHDLGRKNFVA 129

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           + W    K+ S   +   +R    +++  H+ F           + + +    L  QG +
Sbjct: 130 KVWE--WKEKSGNTITTQMRRMGDSVDWDHEYF----TMDEKLSTVVTETFVRLYEQGLI 183

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCK 344
           Y G          Q    D   L   ST     +   L    DG  T    D A  + +
Sbjct: 184 YRGKRLVNWDPVLQSAVSD---LEVESTEAEGKMHYVLYPFVDGPQTIKGIDGAADEVR 239


>gi|225619103|ref|YP_002720329.1| valyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225213922|gb|ACN82656.1| valyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 884

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 56/198 (28%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L +       +   +       +I     N TG +H+GH     + D L   
Sbjct: 10  TPKNIEDKLYNFWKENGFFHAVMDKNKEPYSIVIPPPNVTGVLHMGHGLNNTLQDILIRF 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                  L     W            +P   + G+  ++V +  
Sbjct: 70  HR--------------------MLGKCTLW------------MPGTDHAGIATQNVVERR 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++    + + +    II   L+ +    D          G  + +
Sbjct: 98  LKAEGKNKHDLGREAFVKKTWEVANEHH-SIIVKQLEKIGCSCDWDRERFTLDEGLSNAV 156

Query: 274 RDIIDNLARQGYVYEGIL 291
           R++   L  QG +Y G  
Sbjct: 157 REVFVELYNQGLIYRGKY 174


>gi|149175985|ref|ZP_01854602.1| glutamyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148845139|gb|EDL59485.1| glutamyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 523

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 96/279 (34%), Gaps = 33/279 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--FWRYQ 186
           + +PTG MH+G  R A+     A     +G +      I+D   Q   L+ ++    +  
Sbjct: 9   APSPTGYMHIGGMRTALFNWLWAR---HNGGQFILR--IDDT-DQERNLSEALGPILQAF 62

Query: 187 QALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + L  +  + PE G   G Y +    EL      +LL           +DY     ++  
Sbjct: 63  KWLGLDWDEGPEVGGEYGPYFQSERNELYRAAVDQLLAAG-----KAYRDYDTPEQIQAD 117

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R+   A   + +           +        +  A +G      L  P+ +  Q  D  
Sbjct: 118 RE--AASREKKNYLNIRRSLELTESEQ-----EQYAAEGRPSVVRLLVPRDQKIQIDDAV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R  + F +   G   D  +L+ +G+  Y   +LA      +    ++I     +H     
Sbjct: 171 RGHVEFDA---GLMPDPVILRGNGTPLY---NLATVIDDAQMQISHVIR--AEEHLSNTP 222

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
               +  A+  +  Q   +      +   G   K+SKR 
Sbjct: 223 VQVLIYQALGYELPQFAHIPF----VAAPGGKEKLSKRK 257


>gi|85709981|ref|ZP_01041046.1| leucyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688691|gb|EAQ28695.1| leucyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 835

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 20/139 (14%)

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +       G  +KMSK   + +   +++DE G+D+VR+ ML     E    D     E  
Sbjct: 599 DGGEEVERGRVVKMSKSKKNVVDPDNIIDEYGADAVRWFMLSDSPPER---DLPW-SEAG 654

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
            E    +VQ    R   +F Q  +     D  L  +      +  +  E         + 
Sbjct: 655 IEGCWRFVQ----RLWRLFDQIDESATGEDKSLARKAHQAIVAVAEDIEA------LSFN 704

Query: 507 RVIEN------ATIAQEPY 519
           + +        A     P 
Sbjct: 705 KAVARIYELTGAAEKAAPS 723



 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 2/124 (1%)

Query: 92  YLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              PS    +  ++   +G     +   K     +E     P+G +H+GH R   +GD L
Sbjct: 5   RFDPSTADGRWQAAWEKAGTFTANSDSDKPKSYILEMF-PYPSGRIHMGHVRNYTMGDVL 63

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A   A  G+EV      +  G      A+       +  Y N   +        +     
Sbjct: 64  ARYKAMRGFEVLHPMGWDAFGMPAENAAMEKKVHPGEWTYANIEAMKAQLKRIGFALDWT 123

Query: 211 KELA 214
           +E A
Sbjct: 124 REFA 127


>gi|23008069|ref|ZP_00049667.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 192

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   + +   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 16  AKDAEPRWQQAWDQAKLFETKNDDPRPKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARY 74

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 75  KRAKGHNV 82


>gi|330836349|ref|YP_004410990.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748252|gb|AEC01608.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 478

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 103/316 (32%), Gaps = 41/316 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  D L  +++++GY V     I D G                     D  L
Sbjct: 38  HIGNLRTYVFEDVLRRVLSYAGYNVKHVMNITDVG-----------HLTDDGDAGEDKML 86

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  +     D +  +       +   I K       M  +   L+     +
Sbjct: 87  KSAREKGMSVWDIASFYTDAFFRDFDALGNMRPQIICKATDHVQQMITLIQKLEEGGHTY 146

Query: 257 ----DIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
               +++ S D F   G  + +   +D L                  T K +     L F
Sbjct: 147 AAGGNVYFSIDTFPDYGKLAGLHLHMDELKA---------GARIEVDTFKRNPKDFVLWF 197

Query: 312 RSTMVGDDV---DRPLLKSDGSYTY--FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            ++  G+     D P  +    +     A  + Y   K++      I  +   H+  + +
Sbjct: 198 TNSKFGEQAMMWDSPWGRGYPGWHIECSAMSMTYLGDKFDLHCGG-IDAIPVHHTNEIAQ 256

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV--RF 424
            EA           +   +     L   G   KMSK +G F+TL+ ++D+ G + +  RF
Sbjct: 257 SEAATG----DHPWVKYWMHGEFLLNDTG---KMSKSSGSFLTLQVLIDK-GYEPLDYRF 308

Query: 425 MMLWRKNSELLDFDFC 440
             L       L F + 
Sbjct: 309 FCLGAHYRTQLRFSWE 324


>gi|315925586|ref|ZP_07921796.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621127|gb|EFV01098.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 724

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 100/322 (31%), Gaps = 32/322 (9%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+GH    V  DTL       GY+       ++ G +I  +A       +  +  
Sbjct: 90  PSGDLHIGHTYTTVAADTLTRFKRQQGYDAYMLTGSDEHGQKIQKIAEEKGVTPKAYVDG 149

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-MKII 245
             + + E           +++    +             ++  +   +         +  
Sbjct: 150 TVAKIKELWKLMNIDYSQFIRTTDADHVKSVQKIFKRLYDQGDIYKGRYEGWYCTPDEAF 209

Query: 246 RDDLKALNIQHDIF------ISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKT 298
             D + ++ +           SE+ +          ++D +    G++            
Sbjct: 210 WTDTQVVDGKCPDCGRPVERASEEAYFFRMSKYADRLLDYIESHPGFIQPEARQKEMINN 269

Query: 299 TQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAADLAYFKCK---YERGFD 350
             K  +    +   S   G     D      +  D    Y  A L Y   K    +R + 
Sbjct: 270 FIKPGLQDLCVSRTSFDWGIPVEFDPGHVVYVWIDALSNYITA-LGYLNDKPQLMDRYWP 328

Query: 351 NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++++G D    + R   +      ++        +      L + G   KMSK  G+ 
Sbjct: 329 ADLHLVGKD----IIRFHTIYWPIMLMALDLPLPKTIYGHGWILLKGG---KMSKSIGNV 381

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +    +V + G D +R+ +L  
Sbjct: 382 VDPVELVKKYGVDPLRYHVLKE 403


>gi|312127683|ref|YP_003992557.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777702|gb|ADQ07188.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 817

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFKEIEKKWQQKWFSQN-----KYKVSEDSPKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|302871944|ref|YP_003840580.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574803|gb|ADL42594.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 817

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFKEIEKKWQQKWFSQN-----KYKVSEDSPKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|242398250|ref|YP_002993674.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264643|gb|ACS89325.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 958

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 30/261 (11%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +    + +   +  +    +   +  K  K  I       +G +HVGH R   + D +A 
Sbjct: 2   VDFKAIEEKWQNKWLEEKVFEPQMDEKVPKFYITVAFPYLSGHLHVGHARTYTIPDVIAR 61

Query: 153 LMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYY------- 201
                GY V     ++I   G+ I  +A  +  R  Q   LY +   +PE          
Sbjct: 62  FKRMQGYNVLFPMAWHI--TGSPIVGIAERIKHRDPQTVYLYRDIYKVPEDILWSFEDPI 119

Query: 202 -PGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257
               Y     +E   +          F      P    +     +K+    L      + 
Sbjct: 120 NIVKYFMKTARETFIRAGFSVDWSREFHTTSLFPPFSKFIEWQFLKLKEKGLVVKGTHYV 179

Query: 258 IF-------ISEDDFHRGDPSPIRD------IIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            +       + + D   G+   I D      I++      Y+    L P          +
Sbjct: 180 RWDPIVGTPLGDHDLIEGEDVQILDYVLIKFILEENGEVAYLPAATLRPETVYGVTNMWL 239

Query: 305 DRKQLLFRSTMVGDDVDRPLL 325
           + +    ++ +   D++   +
Sbjct: 240 NPEATYVKAKIKNKDIEEVWI 260


>gi|283795457|ref|ZP_06344610.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
 gi|291077118|gb|EFE14482.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091141|emb|CBK77248.1| cysteinyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 469

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 109/362 (30%), Gaps = 38/362 (10%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DT+     + GY+V    Y+++     + +               D+ 
Sbjct: 35  IHIGNARPMIVFDTVRRYFEYKGYDV---NYVSNFTDVDDKIIRKAIE------EGVDAQ 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                Y     K +        +       E   +    +  +Q ++      +      
Sbjct: 86  TISERYIAECKKDMEMMNVKPATVHPKATEEICGM----EEMIQELIDKGHAYVAKDGTV 141

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--- 312
           +    S  ++ +     + D+           E     P      K   D +        
Sbjct: 142 YFRTKSFKEYGKLSHKNLEDLQSGFRELKVTGEEDKEDPTDFVLWKPKKDGEPFWESPWC 201

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
               G  ++  ++    S  Y    +       +  F +        H   + + EA   
Sbjct: 202 EGRPGWHIECSVM----SKKYLGDSIDIHAGGEDLVFPH--------HENEIAQSEAAN- 248

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
              +  A+  +        + +    KMSK  G+F T+R + ++     +RF ML     
Sbjct: 249 --GKPFAKYWMH-----NAFLNIDNKKMSKSLGNFRTVREISEQYDLQVLRFFMLSAHYR 301

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             L+F    +  ++  N +  +     R R +  +A +     +             +F+
Sbjct: 302 SPLNFSAELM--EASRNGLERILTGVERLRDLLAKAAEKEMSGEERRNLETAAELVKKFE 359

Query: 493 TS 494
            +
Sbjct: 360 AA 361


>gi|218281016|ref|ZP_03487595.1| hypothetical protein EUBIFOR_00153 [Eubacterium biforme DSM 3989]
 gi|218217697|gb|EEC91235.1| hypothetical protein EUBIFOR_00153 [Eubacterium biforme DSM 3989]
          Length = 487

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 102/301 (33%), Gaps = 64/301 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MH+G+ R A+          GD L  +               D   ++     
Sbjct: 9   APSPTGYMHIGNLRTALFEFLIAKHEGGDFLLRIEDT------------DQERKVEGAVD 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            ++   ++   N D     G   G Y++     +   Y+ EL+      +      +  +
Sbjct: 57  VIYKTLKECGLNWDEGPDIGGDFGPYVQSERLPMYKGYAEELIKLGGAHYC-----FCSE 111

Query: 240 AMMKIIRDDLKALNIQH-----DIFISEDD----FHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++  R + ++L I          +S ++       G+P  IR  I N+   G  Y   
Sbjct: 112 EEIEAQRKEAESLGISFKFNDPCKHLSAEEVQAKLDAGEPYVIRQTIKNV---GETYFD- 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   + ++D   L           ++ L+KSDG  TY  A++      ++    
Sbjct: 168 -----DEVYGRIEVDGDVL----------DEQILIKSDGYPTYNFANI---IDDHQMQIS 209

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++  V G+++     +   +  A    +          V         K+SKR GD    
Sbjct: 210 HV--VRGNEYLSSTPKYNLIYDAYGWDRPTYVH-----VPPVMKDEHHKLSKRNGDASFQ 262

Query: 411 R 411
            
Sbjct: 263 D 263


>gi|71066405|ref|YP_265132.1| valyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|90101547|sp|Q4FQL0|SYV_PSYA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71039390|gb|AAZ19698.1| valyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 984

 Score = 44.9 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 80/276 (28%), Gaps = 52/276 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         Y +    K    +I     N TG +H+GH     + D L   
Sbjct: 30  NPSEVEAGMYQGWED-SGYFQPTFDKDESFSIALPPPNVTGSLHMGHGFNNAIMDALTRY 88

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               G     +   + AG   Q+      V  R  +A              G+  + + +
Sbjct: 89  HRMDGDNTLWQPGTDHAGIATQM------VVERRLEA-------------EGIKRRDMSR 129

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E          +F ++ W    K+ S   + + IR     L    D          G  +
Sbjct: 130 E----------DFIDKVWE--WKEESGGNITRQIR----RLGSSVDWSRERFTMDDGLSN 173

Query: 272 PIRDIIDNLARQGYVYEG---------ILPPPKSKTTQKCDMDRKQLLFR-----STMVG 317
            ++++   L   G +Y G                   +  D       FR     + +  
Sbjct: 174 AVKEVFVRLFDDGLIYRGKRLVNWDPKFQTALSDLEVENVDEKGSLWHFRYHFTDTDITT 233

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            D    L+ +         D A      +  + ++I
Sbjct: 234 QDGKNYLVVATTRPETSLGDTAVAVNPKDERYAHLI 269


>gi|253581893|ref|ZP_04859117.1| glutamate-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251836242|gb|EES64779.1| glutamate-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 507

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 77/449 (17%), Positives = 148/449 (32%), Gaps = 69/449 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-------AGAQINTLALS 180
           ++ +PTG  HVG    A+     A +   +G  + R   I D       AG++   +  +
Sbjct: 12  IAPSPTGDPHVGTAYIALFNLAFAHI--NNGDFILR---IEDTDQNRYTAGSE-QMIFDA 65

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           + W         D   P     G Y +    EL  +Y+ +L+      +        ++ 
Sbjct: 66  LKWLDLNYAEGPDVGGP----YGPYRQSERFELYGEYAKQLVEKGG-AYYCFCTQERLEK 120

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  +   KA                   S  ++ I      G  Y   L  P    T 
Sbjct: 121 LRERQKAMGKAPGYDGHC-----------RSLTQEEIQAKLDAGEPYVIRLKMPYEGETI 169

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  R  ++F +  +    D+ LLK+DG  TY    LA     +     ++I     + 
Sbjct: 170 IKDRLRGDIVFENNKID---DQVLLKADGFPTYH---LANVVDDHLMEVTHVIR--AEEW 221

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VG 418
                +   +  A      +   +      L R+    K+SKR  + ++L    DE  + 
Sbjct: 222 IASTPKHIQLYKAFGWDAPEFIHM-----PLLRNADRTKISKRK-NPVSLNWYRDEGYLK 275

Query: 419 SDSVRFMMLW----RKNSELLDFDFCK----VKEQSKENPVF-YVQYAYARCRSIFRQAK 469
              V F+ L      +N E+   +  K    + + S   PVF  V+  +   + +  +  
Sbjct: 276 EGIVNFLGLMGYSFGENKEIFTLEEFKENFNINKVSLGGPVFDLVKLGWVNNQHMRMKDL 335

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D    L    F +     E+  +     ++  +     ++  +            L ++A
Sbjct: 336 DELSKLAVPFFQQQGHVGENVSEKEYEAIVKIVG----ILRESAQT---------LKEIA 382

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMM 558
                ++    E P     +  N+K    
Sbjct: 383 VEATAYYQDDFELPE--VTEEMNKKERKS 409


>gi|289525341|emb|CBJ14817.1| valyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434891|gb|ADH17069.1| valyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438611|gb|ADH20764.1| valyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 939

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKQRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|224373503|ref|YP_002607875.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588740|gb|ACM92476.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 819

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS + K       S   +         K  I  +   P+G +H+GH R   +GD +A  
Sbjct: 5   KPSSIEKKWQDKWDSEKAFEPKEDYTLPKKYILSMFPYPSGRIHMGHVRNYSIGDAIARY 64

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 65  YRKKGFNV 72


>gi|194017569|ref|ZP_03056180.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010841|gb|EDW20412.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 466

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 112/349 (32%), Gaps = 40/349 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+   + +SGY+V    ++++     + L      +   
Sbjct: 29  CGPTVYNYIHIGNARPAIVYDTVRKYLEYSGYDV---NFVSNFTDVDDKLI-----KAAN 80

Query: 188 ALYNNDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L  +   + + +       +  +G + AD +     N  +           + A +  +
Sbjct: 81  ELGEDVPTIADRFIQAYFEDVSALGCKKADLHPRVTENMDD-----------IIAFIATL 129

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   A     D++ S   F  G        ID L        G       K     D  
Sbjct: 130 IEKGYAYEADGDVYYSTRSF-EGYGKLSHQSIDELK------TGARIRVGEKKRDALDF- 181

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L   +       D P    +G   +     A  K    +   + I +          
Sbjct: 182 --ALWKAAKDQEISWDSPW--GEGRPGWHIECSAMVK----KYLGDTIDIHAGGQDLTFP 233

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
             E   A       +       +   Y +    KMSK  G+F+ +  +V E   D +RF 
Sbjct: 234 HHENEIAQSEALTGKPFAKYW-MHNGYINIENEKMSKSLGNFVLVHDIVKEQDPDVLRFF 292

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ML       +++    +  +S ++    ++ +YA        + +I  D
Sbjct: 293 MLSVHYRHPINYSMDLL--ESTKSAFNRLKTSYANLHHRLESSTNITED 339


>gi|158334219|ref|YP_001515391.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082976|sp|B0C1R1|SYL_ACAM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158304460|gb|ABW26077.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 855

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +S    G++       K     +      P+G +HVGH R  V+ D +A L    GY
Sbjct: 13  KWQASWAKQGLDATPEDTSKPKFYALSMF-PYPSGSLHVGHTRNYVITDVIARLKRMQGY 71

Query: 160 EV 161
            V
Sbjct: 72  RV 73


>gi|189082975|sp|A4YI28|SYL2_METS5 RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|145702938|gb|ABP96080.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 950

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 37/107 (34%), Gaps = 8/107 (7%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       + I        K     + F   N   P H+GH R  V GD  A  M   GY
Sbjct: 19  KWQEEWSKNRIFEADPKDQKKFFTTVAFPYPN--SPFHLGHGRTYVTGDVYARFMRMKGY 76

Query: 160 EVT--REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYP 202
            V     ++    G  I T+A  V    +  L  + N  ++P    P
Sbjct: 77  NVLFPMGFHF--TGTPIITMADDVAKGDKDLLDIFQNIYEIPADVIP 121


>gi|313157907|gb|EFR57313.1| glutamate--tRNA ligase [Alistipes sp. HGB5]
          Length = 510

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 52/281 (18%), Positives = 100/281 (35%), Gaps = 23/281 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G  + R   I D  +Q        +      
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAR--QHGGVMILR---IEDTDSQRFVPGAEEYILESLK 64

Query: 189 LYNNDSD--LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
               + D  +  G     Y +   +E+  KY+ +L++     W     D + +  +  +R
Sbjct: 65  WCGIEIDEGVGAGGPHAPYRQSERREIYLKYALQLVDAG---WAYYAFDTAEE--LDALR 119

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            + +          +  +      +   D +     +G  +      P+++T +  D+ R
Sbjct: 120 REAEERGEAFAYNYAVREKLATSLALPADEVKARIERGDQWVIRFRMPENQTVEMDDLIR 179

Query: 307 KQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             +   ++ +    D+ L KS D   TY    LA     Y     ++I   G +    + 
Sbjct: 180 GHVEVNTSTLD---DKVLYKSADALPTYH---LANIVDDYLMEVSHVIR--GEEWLPSLP 231

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               +  A   ++ Q       L+     G   K+SKR GD
Sbjct: 232 LHYLLYRAFGWQERQPRFAHLPLLLKPTGGG--KLSKRDGD 270


>gi|291320317|ref|YP_003515579.1| leucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752650|emb|CBH40623.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 779

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +   +   +      K  K  I  +   P+G +H+GH R   +GD LA      
Sbjct: 9   IENKWQNYWENSHYFEPKNDHKLPKKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRK 68

Query: 158 GYEV 161
           G+ V
Sbjct: 69  GFNV 72


>gi|251780290|ref|ZP_04823210.1| glutamate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084605|gb|EES50495.1| glutamate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 485

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 114/291 (39%), Gaps = 35/291 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQ 186
           + +PTG MHVG+ R A+    +A     +G  + R   I D   Q   +  A+ + +   
Sbjct: 11  APSPTGYMHVGNLRTALYAYLIAK--HEAGDFILR---IEDT-DQERLVDGAVDIIYNTL 64

Query: 187 QALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +    N  + P+ G   G Y++   K +  +Y+  L+   E  +    KD      + ++
Sbjct: 65  KLTGLNHDEGPDIGGNVGPYVQSERKAIYLEYAKNLVEKGEAYYCFCSKDR-----LDML 119

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +++ +AL            + +      ++ I+    +G  Y      P + +T   D+ 
Sbjct: 120 KENAEALKRPF-------KYDKHCLHLTKEEIEANLAKGLPYVIRQNNPTTGSTTFDDVI 172

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             ++   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 173 YGKITVDNSEL---EDMILIKSDGLPTY---NFANVVDDHLMGITHI--VRGNEYLSSSP 224

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A          + C  +         K+SKR GD  +   ++ +
Sbjct: 225 KYNRLYEAFGWDIP--VYVHCPPIM---KDTHHKLSKRNGDA-SFEDLMKK 269


>gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 666

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAAEAGISPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+ +           +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ ++ +  D     I           ++SE+ +          ++     Q    + 
Sbjct: 135 FTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLVAFFKEQPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +         L+     + +DG
Sbjct: 253 MDHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|216263552|ref|ZP_03435547.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980396|gb|EEC21217.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 480

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 119/340 (35%), Gaps = 49/340 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D  +
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVV 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ ++ + +   + +  +           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVQEISEFFTEAFFKDCRKLNVVYPDKVLIASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTFSRVDIDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +  V   +++K   I V    L+  Y      KMSK +G+FIT++ + ++       
Sbjct: 248 INEIAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSSGNFITVKDLEEQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAYAR 460
           R++ L       L F     +  + ++EN +  + Y YA 
Sbjct: 303 RYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYAS 342


>gi|256044655|ref|ZP_05447559.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564001|ref|ZP_05834487.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991079|ref|ZP_06103636.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|25009373|sp|Q8YH17|SYM_BRUME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|260154017|gb|EEW89109.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001863|gb|EEZ14438.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 515

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 28/335 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 NNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            L Y     ER        +++G D    + R  AV        AQ+ +        +  
Sbjct: 241 -LGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF 295

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 296 NRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|238785041|ref|ZP_04629038.1| Valyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714082|gb|EEQ06097.1| Valyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 965

 Score = 44.9 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGREAFIDKIWQWKDESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|260779404|ref|ZP_05888295.1| valyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604494|gb|EEX30794.1| valyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 957

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQAWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +  +Y G               D +
Sbjct: 152 AVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|257452225|ref|ZP_05617524.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058768|ref|ZP_07923253.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684444|gb|EFS21279.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 887

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 59/200 (29%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  +      I      +   L       +I     N TG +H+GH     + DTL 
Sbjct: 7   TYSPKEIESKWYPIWEEKKYFAGKLEEGKENYSIVIPPPNVTGILHMGHVLNNSIQDTLV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                                            YQ+    N   LP   + G+  ++  +
Sbjct: 67  R--------------------------------YQRMTGKNTLWLPGCDHAGIATQNKVE 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +      +   E++L    ++  +    II   L+ L    D          G   
Sbjct: 95  RKLKEEGLTKEDLGREEFLKRTWEWKEEHG-GIITTQLRKLGASLDWDRERFTMDEGLSH 153

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            +R I  +L + G +Y+G  
Sbjct: 154 AVRKIFVDLYKDGLIYQGEY 173



 Score = 37.6 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +   I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGL-YEMKDIPFHNVFFHGIVRDDLGRKMSKSLGNSPNPLDLI 543

Query: 415 DEVGSDSVRFMMLWRK 430
           D+ G+D++RF M++  
Sbjct: 544 DQYGADAIRFSMIYNT 559


>gi|297199667|ref|ZP_06917064.1| valyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713963|gb|EDY57997.1| valyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 876

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 73/266 (27%), Gaps = 40/266 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +         I     N TG +H+GH     + D L   
Sbjct: 21  APAEVEGALYERWVERGYFTADAKSDKPPYTIVIPPPNVTGSLHLGHAFQHTLMDALTRR 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE             ++   ++   + +Q L                        
Sbjct: 81  KRMQGYEAL-------WLPGMDHAGIATQNKVEQQL------------------------ 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E+++  V  +  +   +I+   ++ L    D          G    +
Sbjct: 110 -AEEGKSRHDLGREEFVERVWQWKEEYGGRILGQ-MRRLGDGVDWSRERFTMDEGLSKAV 167

Query: 274 RDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
             I   L     +Y              + +  + +         S   G+  D  ++ +
Sbjct: 168 LTIFKRLYEDELIYRAERIINWCPRCLTAISDIEVEYQEDAGELVSIRYGEGEDSLVVAT 227

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
             + T    D A      +  + ++I
Sbjct: 228 TRAET-MLGDTAVAVHPDDERYQHLI 252


>gi|197335538|ref|YP_002155167.1| valyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197317028|gb|ACH66475.1| valyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 957

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|78776979|ref|YP_393294.1| isoleucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123550505|sp|Q30SH2|SYI_SULDN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78497519|gb|ABB44059.1| Isoleucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 919

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +YV GSD   G+ +    ++AAV  K     VL         D    KMSK  G+ +   
Sbjct: 566 LYVEGSDQHRGWFQSSMFLSAAVEHKAPYKGVLTHGF---TVDEKGEKMSKSKGNVVAPE 622

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            V+ E GS+ +R  +        L      + +QS EN 
Sbjct: 623 TVLKEYGSEILRLWVASSDYQGDLKIS-QSILKQSAENY 660


>gi|326692181|ref|ZP_08229186.1| valyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 894

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 62/249 (24%), Gaps = 41/249 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE-----FVSANPTGPMHVGHCRCAVVGD 148
            P+ +             +             E         N TG +H+GH     + D
Sbjct: 11  DPTAVEAGRYDHWQEKKLFAPESNQAIQGQEPEPYAIVIPPPNVTGKLHLGHAWDTTLQD 70

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +       G +V            ++   ++   + +Q L                   
Sbjct: 71  MIIRQKKMQGMDVL-------WLPGMDHAGIATQAKVEQRLRGE---------------- 107

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                         +   EK++  V D+        I+     + +  D          G
Sbjct: 108 ---------GVSRYDLGREKFVEQVWDWK-NEYAATIKQQWGKMGLSLDFDRERFTLDEG 157

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +  +  +L  +G +Y G          +    D +  +      G         +D
Sbjct: 158 LNKAVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIE--VIYQDDEGAFYHVKYPFTD 215

Query: 329 GSYTYFAAD 337
           G+ T+   D
Sbjct: 216 GT-TFDGKD 223



 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+       + ++   NVL+  L+   RDG   KMSK  G+
Sbjct: 495 TGYD-IIFFW-------VARMMFQGKEFTGQRPFKNVLIHGLI---RDGEGRKMSKSLGN 543

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            +    V+++ G+D++R+ +       + + F + K+
Sbjct: 544 GVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKM 580


>gi|260881229|ref|ZP_05403942.2| glutamate--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849336|gb|EEX69343.1| glutamate--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 469

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 95/300 (31%), Gaps = 70/300 (23%)

Query: 136 MHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           MH+G+ R A+ G   A       ++     +  R  Y+ DA   IN             +
Sbjct: 1   MHIGNLRTALYGYLYAKSQQGQFILRIE--DTDRTRYVADAVDFINRTLEMAH------I 52

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
             ++S    G Y G Y++    +L  KY+ EL+                 A       D 
Sbjct: 53  VPDESPSLGGPY-GPYVQSERMDLYKKYAEELVKTG-------------HAYYCFCNPDE 98

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                +         + R   +   ++I+   + G  Y      P +  T   D+    +
Sbjct: 99  DHSAGKFGG------YDRTCRNLAPEVIEEHLKNGDPYVIRQKMPLTGETTFFDVLHGNI 152

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
             ++  +    D+ LLK DG  TY               F N+I     DH  ++  +  
Sbjct: 153 TIKNEEL---EDQVLLKRDGMPTY--------------NFANVID----DHLMHITHIMR 191

Query: 370 VAAAV-------------SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            A  +                     + L  ++    DG   K+SKR G   +   +V  
Sbjct: 192 GAEFITSTPKYILLYESFGWDVPTF-IHLAPVMGKNEDGSISKLSKRHG-ATSFDDLVKA 249


>gi|195952737|ref|YP_002121027.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932349|gb|ACG57049.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 493

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 134/411 (32%), Gaps = 40/411 (9%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    +  DT+A      G++V      ++ G ++   A       ++    N  + 
Sbjct: 17  HIGHAYTTIAADTIARYKRQKGFDVFFLTGTDEHGLKLQKAAEEKGMTPKELCDKNFENF 76

Query: 197 P----------------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                               Y   Y++ V  ++ ++       + E  +    +++  ++
Sbjct: 77  KNLWDFLKISYDHIIRTTDDYHKAYVQEVITKVYER-GDIYKGYYEGYYCVGCEEFKPES 135

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPK 295
            +K    D      +    + +++ +    S  +D +  L    ++      E ++   +
Sbjct: 136 EIKDF--DYSCPIHKKKCELIKEETYFFKLSKYQDKLLELYETDFIKPDYRKEEVIAFVR 193

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDNMIY 354
                      K+ +     +  D +  +    D  + Y +A    FK K E    +  +
Sbjct: 194 QGLKDLSITRPKERVSWGIELPFDKNHVIYVWFDALFNYISA--LKFKNKLEFWPADF-H 250

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           ++G D    + R  AV          + +        +      KMSK  G+ I    VV
Sbjct: 251 IVGKD----ILRFHAVYWPAFLMSLDMELPKHVYAHGWWTVEGQKMSKSLGNVINPYDVV 306

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E G D  R+ +L R+ +   D DF K   + + N            R+     K     
Sbjct: 307 NEYGLDETRYFLL-REVAFGQDGDFSKEAVKRRINGELANGIGNLISRTFAMCIKYGIIK 365

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
            D      +      E   +  + +  L ++ + +E          L  YL
Sbjct: 366 KDDIKEDEDYKKIAIEVLEAFDKYMNEL-QFHKALEEVMK------LVDYL 409


>gi|78357482|ref|YP_388931.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123754859|sp|Q30YL0|SYL_DESDG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78219887|gb|ABB39236.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 829

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 18/205 (8%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +    I      +         K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 4   NPQAIEEKWQHIWEEKEMFRSEHGSDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARF 63

Query: 154 MAFSGYEVTREYYINDAGAQINTLALS-----VFWRYQQALYNNDSDLPEGYYPGVYLKH 208
               G+ V      +  G      A+        W Y   + N  S L    Y   + + 
Sbjct: 64  KRMQGFNVLHPMGWDAFGLPAENAAIKHDTHPAKWTYSN-IDNMRSQLKRLGYSYDWRRE 122

Query: 209 VGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKA------LNIQHDIFI 260
           +    A+ Y  E L F +  EK L I +  + Q         L        L  + D  +
Sbjct: 123 LATCDAEYYRWEQLFFLKFMEKGL-IYRKKAPQNWCPKCNTVLANEQVIDGLCWRCDSVV 181

Query: 261 SEDDFHRG---DPSPIRDIIDNLAR 282
            + D  +      S   +++ +L +
Sbjct: 182 EQRDLAQWFLRITSYAEELLADLEK 206


>gi|51594881|ref|YP_069072.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|153948685|ref|YP_001402499.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|186893891|ref|YP_001871003.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81825944|sp|Q66F11|SYV_YERPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51588163|emb|CAH19769.1| valine tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|152960180|gb|ABS47641.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|186696917|gb|ACC87546.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 965

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|323144739|ref|ZP_08079316.1| valine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415490|gb|EFY06247.1| valine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 956

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 62/213 (29%), Gaps = 32/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P      +     +   +  +        +I     N TG +H+GH     + D+L    
Sbjct: 9   PEKFESKIYINWENNGLFKPSGDTAAKAYSIALPPPNVTGSLHMGHAFQQTIMDSLIRFH 68

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             +G     +   + AG     +                               V ++LA
Sbjct: 69  RMNGDNTLWQCGTDHAGIATQMV-------------------------------VERKLA 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            + +    +   EK++  +  +  ++   I R  ++ L    D          G  + ++
Sbjct: 98  KEENLTRHDLGREKFIERIWKWRQESGGTITRQ-MRRLGDSVDWSRERFTMDEGLSNAVK 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L  +  +Y G          +    D +
Sbjct: 157 EVFVRLYDEDLIYRGKRLVNWDPKLRTAISDLE 189


>gi|317494179|ref|ZP_07952595.1| valyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917952|gb|EFV39295.1| valyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 951

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPNGDTSKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKEESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|262369356|ref|ZP_06062684.1| valyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262315424|gb|EEY96463.1| valyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 964

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K           +  +   KG    I     N TG +H+GH     + 
Sbjct: 7   NIATTYDPTEIEKKWYQTWEERGYFKPSE--KGESFCIMIPPPNVTGSLHMGHGFNNAIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L      SG                           +  L+   +D        V  +
Sbjct: 65  DALTRYNRMSG---------------------------KNTLWQPGTDHAGIATQMVVER 97

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +   ++     +   EK++  V ++  Q+   I R  ++ L    D          
Sbjct: 98  QLGAQGVSRH-----DLGREKFIEKVWEWKEQSGGTITRQ-IRRLGSSVDWSRERFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 152 GLSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLE 191


>gi|257465980|ref|ZP_05630291.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917136|ref|ZP_07913376.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691011|gb|EFS27846.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 887

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 59/200 (29%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  +      I      +   L       +I     N TG +H+GH     + DTL 
Sbjct: 7   TYSPKEIESKWYPIWEEKKYFAGKLEEGKENYSIVIPPPNVTGILHMGHVLNNSIQDTLV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                                            YQ+    N   LP   + G+  ++  +
Sbjct: 67  R--------------------------------YQRMTGKNTLWLPGCDHAGIATQNKVE 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +      +   E++L    ++  +    II   L+ L    D          G   
Sbjct: 95  RKLKEEGLTKEDLGREEFLKRTWEWKEEHG-GIITTQLRKLGASLDWDRERFTMDEGLSH 153

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            +R I  +L + G +Y+G  
Sbjct: 154 AVRKIFVDLYKDGLIYQGEY 173



 Score = 37.6 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +   I         + RD +  KMSK  G+      ++
Sbjct: 486 VTGAD-IIFFWVARMIMFGL-YEMKDIPFHNVFFHGIVRDDLGRKMSKSLGNSPNPLDLI 543

Query: 415 DEVGSDSVRFMMLWRK 430
           D+ G+D++RF M++  
Sbjct: 544 DQYGADAIRFSMIYNT 559


>gi|221197702|ref|ZP_03570748.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204740|ref|ZP_03577757.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221175597|gb|EEE08027.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221181634|gb|EEE14035.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 981

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 79/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + +      E              +F       N TG +H+GH     + 
Sbjct: 31  TLAKSFEPHTIEAQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 90

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 91  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 118

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I   ++ L    D          
Sbjct: 119 IVVERQLDAQGVSRHDLGREKFVERVWEWKQKSG-STITGQVRRLGASTDWSREYFTMDD 177

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 178 KMSAAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 237

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 238 SGSLTVATTRPETMLGDVAVMVHPEDERYRHLI 270


>gi|210135724|ref|YP_002302163.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133692|gb|ACJ08683.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 806

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       RK       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------ERKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|196233312|ref|ZP_03132157.1| leucyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196222617|gb|EDY17142.1| leucyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 909

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +           L+ + + L  DG   KMSK  G+
Sbjct: 621 LYVGGTEHAVLHLLYARFWHKVLFDLGYVSTPEPFQRLVNQGIILGEDGQ--KMSKSRGN 678

Query: 407 FITLRHVVDEVGSDSVR 423
            +    V+ E G+D++R
Sbjct: 679 VVNPDDVITEYGADALR 695


>gi|75907972|ref|YP_322268.1| arginyl tRNA synthetase anticodon binding [Anabaena variabilis ATCC
           29413]
 gi|75701697|gb|ABA21373.1| Arginyl tRNA synthetase anticodon binding protein [Anabaena
           variabilis ATCC 29413]
          Length = 291

 Score = 44.9 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 39/147 (26%)

Query: 452 FYVQYAYARCRSIFRQAK--------DIFPDLDFDLFPRNVIPQES-----------EFD 492
           F +QYA+ARC S+   A+        +  PD   +L   ++                   
Sbjct: 142 FAMQYAHARCCSLILLAQRGGLILFREPLPDNWQELALGSLASTMQIPWLNGEAKIRLNH 201

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPY--------KLAFYLYDLASVFHGHWSHGRENPR 544
            +E  LI  L +   V+++      P+        KL     DL+  F   WS  R    
Sbjct: 202 PAESCLISELIQ---VVDS---LIFPHDDKVMNWEKLGS---DLSQAFGTFWSQCRIWGE 252

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIIN 571
           ++       ++T  RL L+ A  ++  
Sbjct: 253 VKTTL---PEVTQARLGLILATQTVFR 276



 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 14/144 (9%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERP----RDCAHGHLSTNAAMILSRPLGLDPL 62
               L +YL  +       ++    I  E P    RD          A+ L++    DP+
Sbjct: 13  IRQLLYSYLLVVVDSFNSHQEQQSTIKAEIPLYKGRDSQRILYICGVALRLAKSHNRDPM 72

Query: 63  TIAELIVARIKIDPDVDS--VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120
            IA +I +R+ +D   ++  V I   G+I+L L+ S L   L ++ + G+   R      
Sbjct: 73  EIASVITSRL-LDICKENLLVRIVDPGWIHLELADSLLAAWLQNLSLGGLGDDR-----D 126

Query: 121 TKVNIEFVSANPTG--PMHVGHCR 142
           TK N  FV+ +P+    M   H R
Sbjct: 127 TKENERFVTIHPSRLFAMQYAHAR 150


>gi|327481783|gb|AEA85093.1| valyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 944

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 58/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESNNYFAPQGSGEPYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRWR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                               V ++LA
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMV-------------------------------VERQLA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +  +   +   EK+L  V  +  ++   I R  ++ L    D          G    ++
Sbjct: 94  AQ-GTSRHDLGREKFLEKVWQWKEESGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|290581146|ref|YP_003485538.1| putative glutamyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254998045|dbj|BAH88646.1| putative glutamyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 485

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 99/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGDFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L      L  KY  +LL           K Y  
Sbjct: 64  -----RWLGMDWDESPETHENYRQSERL-----ALYKKYIDQLLAEG-----KAYKSYVT 108

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +   R+  +A   +   +I+E  F           I      G V    L   ++  
Sbjct: 109 EEELAAERERQEAAG-ETPRYINE--FLGMSADEKAAYIAKRQAAGIVPTVRLKVNEAGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     ++    ++I   G 
Sbjct: 166 YKWHDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHDMQISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +          +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPAFAH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511833|sp|C4KZR7|SYC_EXISA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 465

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 106/351 (30%), Gaps = 42/351 (11%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            L + + +  E    ++     + +          +HVG+ R A+  DT+   + + GYE
Sbjct: 3   QLYNSLTNKKEPFVPIVPGKVSMYV--CGPTVYNYIHVGNARPAIAFDTVRRYLTYRGYE 60

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-GKELADKYSS 219
           V       D   +I   A  +           D++     Y   YL       +      
Sbjct: 61  VKYVLNFTDVDDKIIRTANEL---------GEDTETLTNRYIEAYLADTGALNVQPADVH 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +    E+ +  ++    +          ++    +      + + +     I D    
Sbjct: 112 PRVTDTMEEIIEFIRQLETEGFA------YESEGDVYFRTKKFETYGKLSQQSIED---- 161

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
                 +  G       K     D     L   +       D P  K    +    + +A
Sbjct: 162 ------LRAGSRVDVGEKKEDPLDF---VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMA 212

Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQI-NVLLCELVRLYRDGMP 397
                 ++     I +    H       E  +A + +   A+  N  L      + +   
Sbjct: 213 ------KKHLGTTIDIHAGGHDLKFPHHENEIAQSEACNHAKFANYWLHNG---FINIEN 263

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            KMSK  G+F+ +   + EV    +RF ML       +++    +++ +  
Sbjct: 264 EKMSKSLGNFLLVHEALKEVDPMVLRFFMLSVHYRHPINYSRELIEQAANG 314


>gi|183219675|ref|YP_001837671.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909811|ref|YP_001961366.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774487|gb|ABZ92788.1| Valine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167778097|gb|ABZ96395.1| Valyl-tRNA synthetase (Valine--tRNA ligase; ValRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 896

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 59/203 (29%), Gaps = 33/203 (16%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + +    +       +    +I     N TG +H+GH     + D +  +    G  V 
Sbjct: 18  WNQIWDEKKTFAPDTSRKETFSIVIPPPNVTGNLHIGHALNHTIQDIIIRIERKKGKNVV 77

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
               ++ AG     +                               V +ELA K      
Sbjct: 78  WVPGMDHAGIATQVV-------------------------------VERELA-KEGKSRT 105

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +F  E+++  V ++   +   I +   + L    D       F  G    +  +   L  
Sbjct: 106 DFTREEFIEKVWEWKKHSGGMISKQQ-RLLGESVDWSKERFTFDEGLSKAVIKVFRTLFD 164

Query: 283 QGYVYEGILPPPKSKTTQKCDMD 305
           +G +Y G         T+    D
Sbjct: 165 EGLIYRGERIINWCPVTKTAISD 187



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 125/374 (33%), Gaps = 48/374 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DF 265
            V  E   K + E++   + ++ P + + +    M+ IRD      I   ++       +
Sbjct: 371 FVKIESLAKPAIEVVKSGKVQFQPKMWEKTYFEWMENIRD----WCISRQLWWGHRIPAY 426

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  +   +  + ++L     ++E       +K T K D D     F S +    V     
Sbjct: 427 YAPNGDMV--VAESLEEAISLFEKK-GISVTKDTIKQDEDVLDTWFSSGLWPFSVFGWPE 483

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K++    Y+   +         GFD +I+   +        +      + +   Q  ++ 
Sbjct: 484 KTEELKQYYPTSV------LVTGFD-IIFFWVAR------MIMNGLKFMGDVPFQKVLIH 530

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
                L RD    K SK  G+ +    ++ + G+DS RF +       + + FD  ++  
Sbjct: 531 G----LVRDKDGKKFSKSLGNVVDPLDMMSKYGTDSFRFFLAAVLPEGKDILFDESRL-- 584

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
              +    +    +   R IF    + F  ++ +L            +         L  
Sbjct: 585 ---DGYRSFCNKIWNSSRFIFMNLPEDFSPIEPNLDSLEDTDLWILHEFD-----QMLGR 636

Query: 505 YPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           Y    E A      +++A  +YD     F   +    +      V   + +    R  LV
Sbjct: 637 Y----EKAYSGYLFFEMANAIYDFVWGSFCDWYLELTKARVYGNVTPESAE--KARQVLV 690

Query: 564 HAVASIINSGLNII 577
                ++   L ++
Sbjct: 691 S----VLKKSLGLL 700


>gi|56961909|ref|YP_173631.1| glutamyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|67461674|sp|Q5WLT5|SYE_BACSK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|56908143|dbj|BAD62670.1| glutamyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 485

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 92/296 (31%), Gaps = 37/296 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN---DAGAQINTLALSVFWRY 185
           + +PTG +H+G  R A+     A   +  G  V R    +   +       L  S+ W  
Sbjct: 10  APSPTGHLHIGGARSALFNYLFAK--SAGGAFVLRIEDTDQARNVDTATEKLMDSLRWL- 66

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP--IVKDYSVQAMMK 243
              L  ++S   E    G Y      ++   Y  +LL+  +  +      +  + +   K
Sbjct: 67  --GLEWDESIDTEAGKYGPYRSMERVDIYKNYIQQLLDEKKAYYCYMTEEELEAEREAQK 124

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              +  K      D+   +   +                +G         P+ +T    D
Sbjct: 125 ARGEMPKYSGRDRDLTAEQRAAY--------------EAKGIQPVVRFRVPEGQTVSFHD 170

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             R ++ F +  +GD     + + DG   Y   + A     +     ++I   G +H   
Sbjct: 171 AVRGEVSFETDGIGDF---VIARKDGVPMY---NFAVVVDDHLMNISHVIR--GEEHLSN 222

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
             R   +  A      +          L  +    KMSKR    I        +G 
Sbjct: 223 TPRQILLYEAFGWDVPKFAH-----ASLILNPDRQKMSKRDESIIQFVEQYKSLGY 273


>gi|27364858|ref|NP_760386.1| valyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37681094|ref|NP_935703.1| valyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155249|ref|YP_004187628.1| valyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|81448661|sp|Q8DCE7|SYV_VIBVU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81756550|sp|Q7MHG1|SYV_VIBVY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27361003|gb|AAO09913.1| valyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37199844|dbj|BAC95674.1| valyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319930561|gb|ADV85425.1| valyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 951

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|121606119|ref|YP_983448.1| isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595088|gb|ABM38527.1| Isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 944

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 62/183 (33%), Gaps = 33/183 (18%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G D   G+       A A+ +      +L         DG   KMSK  G+ +  +
Sbjct: 583 LYLEGHDQHRGWFHSSLLTACAMYDHAPYKGLLTHGF---TVDGKGRKMSKSEGNVVAPQ 639

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V  ++G++ +R        S  L  D  K+  +  +        AY R R+  R     
Sbjct: 640 AVSGKLGAEIIRLWCASTDYSGDLAID-DKILARVVD--------AYRRIRNTLRFLMAN 690

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-LYDLAS 530
             D D  L                   ++ +  Y   +  A    +   LA Y +Y+   
Sbjct: 691 VSDFDPALDAVPFGE------------MLEIDRY--ALSRAAQ-LQADILAHYEVYE--- 732

Query: 531 VFH 533
            FH
Sbjct: 733 -FH 734


>gi|58699049|ref|ZP_00373891.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534443|gb|EAL58600.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 236

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K +        ++  +   K  K  +  +   P+G +H+GH R   +GD +A      G+
Sbjct: 6   KNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGF 65

Query: 160 EV 161
           EV
Sbjct: 66  EV 67


>gi|22124656|ref|NP_668079.1| valyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440493|ref|NP_992032.1| valyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108808935|ref|YP_652851.1| valyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108810810|ref|YP_646577.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600507|ref|YP_001164583.1| valyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|153997515|ref|ZP_02022615.1| valyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418871|ref|YP_001608336.1| valyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165925800|ref|ZP_02221632.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936824|ref|ZP_02225391.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010187|ref|ZP_02231085.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214319|ref|ZP_02240354.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398378|ref|ZP_02303902.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420487|ref|ZP_02312240.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423189|ref|ZP_02314942.1| valyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218930459|ref|YP_002348334.1| valyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229839087|ref|ZP_04459246.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896575|ref|ZP_04511742.1| valyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899650|ref|ZP_04514791.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901013|ref|ZP_04516137.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489193|ref|ZP_06206267.1| valine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294505147|ref|YP_003569209.1| valyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81516753|sp|Q8ZBH1|SYV_YERPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21957465|gb|AAM84330.1|AE013676_3 valine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435350|gb|AAS60909.1| valyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108774458|gb|ABG16977.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780848|gb|ABG14906.1| valyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115349070|emb|CAL22032.1| valyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212203|gb|ABP41610.1| valyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289152|gb|EDM39232.1| valyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351686|gb|ABX85634.1| valyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165915473|gb|EDR34083.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922412|gb|EDR39589.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991094|gb|EDR43395.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204551|gb|EDR49031.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961293|gb|EDR57314.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050882|gb|EDR62290.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057359|gb|EDR67105.1| valyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229682352|gb|EEO78444.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229687142|gb|EEO79217.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695453|gb|EEO85500.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700353|gb|EEO88385.1| valyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262363209|gb|ACY59930.1| valyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262367140|gb|ACY63697.1| valyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270337697|gb|EFA48474.1| valine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294355606|gb|ADE65947.1| valyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016646|gb|ADW00218.1| valyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 965

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|162149625|ref|YP_001192004.2| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 938

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 37/107 (34%), Gaps = 8/107 (7%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       + I        K     + F   N   P H+GH R  V GD  A  M   GY
Sbjct: 7   KWQEEWSKNRIFEADPKDQKKFFTTVAFPYPN--SPFHLGHGRTYVTGDVYARFMRMKGY 64

Query: 160 EVT--REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYP 202
            V     ++    G  I T+A  V    +  L  + N  ++P    P
Sbjct: 65  NVLFPMGFHF--TGTPIITMADDVAKGDKDLLDIFQNIYEIPADVIP 109


>gi|88798081|ref|ZP_01113668.1| valyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779278|gb|EAR10466.1| valyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 961

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 55/195 (28%), Gaps = 35/195 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + +       +   +     G+G   +I     N TG +H+GH     + D L    
Sbjct: 7   PNAIERKHYDHWENQQYF--QPTGQGAPYSIMIPPPNVTGTLHMGHAFQQTIMDALTRYH 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++   +   + AG     +   +                                 
Sbjct: 65  RMMGHDTLWQPGTDHAGIATQMVVERLLG------------------------------- 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E ++  V ++  Q+    I   ++ L    D          G    +R
Sbjct: 94  -AEGKTRHDLGRETFIDRVWEWKGQSG-GTISQQMRRLGDSVDWTRERFTMDEGLSEAVR 151

Query: 275 DIIDNLARQGYVYEG 289
           ++   L  +  +Y G
Sbjct: 152 EVFVRLYDEELLYRG 166


>gi|329768992|ref|ZP_08260415.1| valyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328835799|gb|EGF85522.1| valyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 879

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +     +  +    +  +   K     I     N TG +H+GH     + D L   
Sbjct: 9   NPTQVEHNRYNWWLEKEVFKADNKSKKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++V   Y        ++   +S   + +  +                        
Sbjct: 69  KRLKGFDVL--YLPG-----MDHAGISTQAKVEAKM------------------------ 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   EK+L    D+  +     IR+    L +  D          G    +
Sbjct: 98  -REEGISRYDLGREKFLERAWDWK-EEYAGYIREQWAKLGLGLDYTRERFTLDEGLNKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
             I  +  + G +Y G
Sbjct: 156 TKIFVDHYKNGTIYRG 171



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 56/169 (33%), Gaps = 18/169 (10%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ +    V++E G+DS+R+ +           D     E+ + + 
Sbjct: 515 LVRDEQGRKMSKSLGNGVDPMEVIEEYGADSLRYFLATNSTPGQ---DLRYSTEKIEASW 571

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            +  +   A    I     + F   D DL     +  +        +L   + ++ R+ E
Sbjct: 572 NYINKIWNASRFVIMN--LEGFEYSDIDLSGEKTLADKYILT----KLAKTIEDFERLFE 625

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMM 558
                 E  ++   LY+     F   +           +   +      
Sbjct: 626 K-YEFGEASRI---LYNFVWEEFCSWY----IEIAKISLNGEDEAAKNT 666


>gi|328543726|ref|YP_004303835.1| glutamyl-tRNA synthetase 2 [polymorphum gilvum SL003B-26A1]
 gi|326413470|gb|ADZ70533.1| Glutamyl-tRNA synthetase 2 [Polymorphum gilvum SL003B-26A1]
          Length = 474

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 116/357 (32%), Gaps = 81/357 (22%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQ 173
             +   + +PTG +H+G  R A+          G  L  +        TRE         
Sbjct: 4   QIVTRFAPSPTGYLHIGGARTALFNWLFARHHGGRMLLRIEDTDRARSTRE--------A 55

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ +   + W     L  +   + +      + + V + LA+  +      PEE  L  +
Sbjct: 56  VDAILDGLSWL---GLDWDSEPISQFARVERHREVVEQMLANGTAYRCYATPEE--LETM 110

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++ +         D         D   SE       P+ +   I             L  
Sbjct: 111 RETARAEGRPPRYD-----GRWRDRDPSEA------PAGVAPAI------------RLKA 147

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+   T   D  + +++F +  +    D  L++SDG  TY    LA     ++ G  ++I
Sbjct: 148 PQEGETVVDDQVQGRVVFPNKDLD---DLVLMRSDGVPTYM---LAVVVDDHDMGVTHII 201

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------ 407
              G DH     R   +  A+  +     V +   + L       K+SKR G        
Sbjct: 202 R--GDDHLTNAARQTLIFQAMGWR-----VPVMAHIPLIHGPDGAKLSKRHGALGAEAYR 254

Query: 408 ------ITLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                   +R+ +  +G            D + +  L         FDF K++  + 
Sbjct: 255 AMGYLPAAMRNYLARLGWSHGDDEIMSTEDMIAWFGLDAVGKSPARFDFKKLENLNG 311


>gi|297380329|gb|ADI35216.1| valyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 872

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 99/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLK------SDGSYTY 333
               K        R + LF  + +             G  V  PL+       +D    +
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIHRKIPIIAD---LH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
              +      K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LKARDKVVEKLKENA 333


>gi|296447140|ref|ZP_06889071.1| glutamyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296255305|gb|EFH02401.1| glutamyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 490

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 97/312 (31%), Gaps = 60/312 (19%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           + +     +   + +PTG +H+G  R A+                    ++  A      
Sbjct: 1   MPQTAPQVVTRFAPSPTGFLHIGGARTALF------------------NWLY-AKRHGGR 41

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
             L +    ++       D        + L   G        +       E+ L + K Y
Sbjct: 42  FLLRIEDTDRERSTQGAIDAILDGMRWLGLDWDGDVTYQFSRAPRHREIAEQLLAMGKAY 101

Query: 237 SVQA---MMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
              A    ++ +R+  +      ++D                RD     A  G      L
Sbjct: 102 RCYASAQELEEMRETARREGRPPRYD-------------GRWRDRSPEEAPAGVAPVIRL 148

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P+   T   D  + ++ F +  + D     LL+SDG+ TY    LA     ++ G   
Sbjct: 149 KTPQEGETVIEDAVQGRVTFPNKDIDDF---VLLRSDGAPTYM---LAVVVDDHDMGVTQ 202

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I   G DH     R + +  A+      +       + L       K+SKR G      
Sbjct: 203 IIR--GDDHLTNAARQKHIYEALGWTAPALAH-----IPLIHGPDGAKLSKRHG------ 249

Query: 412 HVVDEVGSDSVR 423
                +G D+ R
Sbjct: 250 ----ALGVDAYR 257


>gi|294507823|ref|YP_003571881.1| glutamyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344151|emb|CBH24929.1| glutamyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 518

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 92/288 (31%), Gaps = 47/288 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+     A              +  D   +I     + +    + 
Sbjct: 42  APSPTGRLHIGGLRTALYNYLFAR------------KHDGDFVLRIEDTDQARYEPGAED 89

Query: 188 ---------ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                     L +++     G Y   Y +    E   +Y+             +V+    
Sbjct: 90  DIREALAWTGLEHDEGPEQGGDY-APYRQSERSEHYHEYA-----------QKLVEAGRA 137

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                   +  +          S     R   +   + ++    +G  Y   L  P+ ++
Sbjct: 138 YYAFDTEEELEELREEHGAYDGSTRRQMRNSLTLSDEKVEQRIDEGDDYVIRLKVPRQES 197

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            Q  D  R  + F ++ +    D+ L+KSDG  TY    LA     +     ++I   G 
Sbjct: 198 VQVEDKIRGTVSFDTSEID---DQVLVKSDGMPTYH---LANIVDDHLMNISHVIR--GE 249

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +      +   +  A+         L    + L  +G   K+SKR  +
Sbjct: 250 EWLSSTPKHVLMYDALGWAPPAFAHL---PLILSPNGG--KLSKRDAN 292


>gi|326201023|ref|ZP_08190895.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988591|gb|EGD49415.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 654

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 61/412 (14%), Positives = 123/412 (29%), Gaps = 60/412 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S+ P    H+G+    V+ D+ A      GY+V  +   ++ G +I   A  V
Sbjct: 9   TTAIAYTSSKP----HIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKAKEV 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ + N   ++         +  +     DK+      + E++   I K    Q  
Sbjct: 65  GISPKEYVDNFAVEIK-------RICDLMNTTYDKFIRTTDEYHEKQVQKIFKKLYEQG- 116

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQG 284
             I +   + +     + F +      G                    +    D L +  
Sbjct: 117 -DIYKGHYEGMYCTPCEAFFTPSQLVDGKCPDCGRECHPAKEEAYFLKLSKYADRLIQHI 175

Query: 285 YVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +   + P   K            Q   + R    +   +  DD     +  D    Y 
Sbjct: 176 NEHPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNYI 235

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGY---VKRLEAVAA---AVSEKKAQINVLLCEL 388
                      +  F+       +D       + R   +      ++ +      +    
Sbjct: 236 TGLGFDVDGNNDEKFNKY---WPADMHLIGKDILRFHTIYWPIMLMAMEVPLPKQVFGHP 292

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSK 447
             L  +G   KMSK  G+ I    +VD  G D+VR+ +L            +  + E+  
Sbjct: 293 WLLMGNG---KMSKSKGNVIYADELVDIFGVDAVRYYVLHEMPFDNDGVISWELITERIN 349

Query: 448 -------ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
                   N V  V     +  S      ++  ++D +L    +   E+  +
Sbjct: 350 SDLANVLGNLVNRVIAMSNKYFSGVVNNSNVREEIDNELIELTLKTPETVVE 401


>gi|197104810|ref|YP_002130187.1| valyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478230|gb|ACG77758.1| valyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 893

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 19/97 (19%)

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
             DLA  Y       GFD +I+   +       +                Q+      + 
Sbjct: 473 TEDLARFYPTHTLVTGFD-IIFFWVARMMMQGLHFT-------------GQVPFQRVFIN 518

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            L RD    KMSK  G+ +    +VDE G+D++RF +
Sbjct: 519 ALVRDATGAKMSKSKGNVMDPLELVDEFGADALRFTL 555


>gi|170025896|ref|YP_001722401.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|169752430|gb|ACA69948.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 965

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|157690877|ref|YP_001485339.1| cysteinyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|187629792|sp|A8F962|SYC_BACP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157679635|gb|ABV60779.1| cysteine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 466

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 113/349 (32%), Gaps = 40/349 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+   + +SGY+V    ++++     + L      +   
Sbjct: 29  CGPTVYNYIHIGNARPAIVYDTVRKYLEYSGYDV---NFVSNFTDVDDKLI-----KAAN 80

Query: 188 ALYNNDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L  +   + + +       +  +G + AD +     N  +           + A ++ +
Sbjct: 81  ELGEDVPTIADRFIQAYFEDVSALGCKKADLHPRVTENMDD-----------IIAFIETL 129

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   A     D++ S   F  G        ID L        G       K     D  
Sbjct: 130 IEKGYAYEADGDVYYSTRSF-EGYGKLSHQSIDELK------TGARIRVGEKKRDALDF- 181

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L   +       D P    +G   +     A  K    +   + I +          
Sbjct: 182 --ALWKAAKNQEISWDSPW--GEGRPGWHIECSAMVK----KYLGDTIDIHAGGQDLTFP 233

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
             E   A       +       +   Y +    KMSK  G+F+ +  +V E   D +RF 
Sbjct: 234 HHENEIAQSEALTGKPFAKYW-MHNGYINIENEKMSKSLGNFVLVHDIVKEQDPDVLRFF 292

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           ML       +++    +  +S ++    ++ +YA        + +I  D
Sbjct: 293 MLSVHYRHPINYSMDLL--ESTKSAFNRLKTSYANLHHRLESSTNITED 339


>gi|78066056|ref|YP_368825.1| valyl-tRNA synthetase [Burkholderia sp. 383]
 gi|77966801|gb|ABB08181.1| valyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 955

 Score = 44.9 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 78/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVG 147
            L+ S+    + S      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIESQWGPEWEKRGYAAPAFDPARPDFSIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKEKSG-STITGQVRRLGASPDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVALMVHPEDERYAHLI 244


>gi|293375371|ref|ZP_06621652.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645924|gb|EFF63953.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 446

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 63/466 (13%), Positives = 141/466 (30%), Gaps = 79/466 (16%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + +      E  R +     ++ I          +H+G+ R  +  D +     + GYEV
Sbjct: 3   IYNTYTREKEEFRPIEENKVRMYI--CGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYEV 60

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                + D   +I   A+                  E       +         + +  L
Sbjct: 61  EFVSNVTDVDDKIINRAI------------------EEGVTEAQISEKYLNYFLECNKAL 102

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
              P      + +  S+ +M++ I              + E DF       +   ID + 
Sbjct: 103 NALPLTAMPKVTE--SMDSMIEFINQ------------LVERDFAYAVDGDVYFRIDKVR 148

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
             G +    +   +       D  ++     +L++ T  G   D P     G   +    
Sbjct: 149 EYGQLSGKKIDELEVGARIAEDSKKENPLDFVLWKKTDKGITWDSPW--GAGRPGWHTEC 206

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGM 396
           +          F   I + G          E  +A ++   +  I      + RL  +  
Sbjct: 207 V----VMINNQFHGKIDIHGGGTDLQFPHHENEIAQSLCMYEHNIANYWMHVGRLGLN-- 260

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ I ++ +++++ +++ R  ML     + +++    ++   KE      Q 
Sbjct: 261 NEKMSKSIGNVINVKDLIEQIDANAFRLFMLSVHYRQPINYTEENIQLAVKE-----WQ- 314

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                     + K  +  L   L     +  E         L+    ++   +E      
Sbjct: 315 ----------KVKSTYDQLHLKLDLAGALDVEPSVVPEIEALM---NQFVEALE---DD- 357

Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                    ++ A+     +   +E  ++   +A++       + L
Sbjct: 358 ---------FNTANAIASLYGVIKEINKMVRAKASDEANRYALMTL 394


>gi|255994628|ref|ZP_05427763.1| glutamate--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993341|gb|EEU03430.1| glutamate--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 550

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 91/303 (30%), Gaps = 62/303 (20%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI----NDAGAQINTLA 178
             +  +  +PTG +H G+   A + + LA       +     +Y+     D+  Q+    
Sbjct: 32  KVVTRLGPSPTGFIHFGNLYGAYINERLA-------HRNDGIFYLRIEDTDSKRQVE--- 81

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------KWLPI 232
                   +AL + D    EG      L +       K      +F  E       +   
Sbjct: 82  -GAKEEIIKALDHFDITFDEGAMATGDLGNYAPYEQSKRRDIYRSFAAELLTKGLAYPCF 140

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + +  +  + K   ++ +   I       E   +R       + +  +   G  Y   L 
Sbjct: 141 LTEDEIADIRKKQEENKQNTGI-----YGEYALYRNLKE--EEAVKKI-EDGCEYVLRLK 192

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
                     D  R +L   +     D+D  +LK DG  TY               F ++
Sbjct: 193 STADIKVDIEDGIRGKLSMPAN----DMDVVILKKDGMPTYH--------------FAHV 234

Query: 353 IYVMGSDH---SGYVKRLEAVAAAVS--------EKKAQINVLLCELVRLYRDGMPIKMS 401
           I     DH   + +V R E   + +                      +    DG   K+S
Sbjct: 235 ID----DHLMRTTHVIRGEEWLSTLPIHIELFAHFGWEPPIYCHTAQLMKIEDGKKRKLS 290

Query: 402 KRA 404
           KR 
Sbjct: 291 KRK 293


>gi|238750164|ref|ZP_04611667.1| Valyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711708|gb|EEQ03923.1| Valyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 965

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|258405242|ref|YP_003197984.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797469|gb|ACV68406.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 938

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 94/276 (34%), Gaps = 35/276 (12%)

Query: 268 GDPSPIRDIIDNLARQG----YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +   +  I+D  A       Y +E  L     +    C         +   + D     
Sbjct: 485 YEADWVHAIVDRFAEHERGADYWFEASLEDIVPEGL-TCPSCGGTHWAKEDDILD----- 538

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQIN 382
            +  D   ++ A  +   + +     D  +Y+ G+D   G+       +    ++     
Sbjct: 539 -VWFDSGTSFAA--VVEQRDECRYPAD--LYLEGTDQHRGWFHSSLLASVGTRDQAPYKT 593

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL    V    DG   KMSK  G+ +  + ++D+ G++ +R  +      E L      +
Sbjct: 594 VLTHGFVV---DGQGRKMSKSIGNVVAPQEIMDKYGAEILRMWVASENYQEDLRISENIL 650

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTSELQLIVH 501
           K+            AY R R+  R    +    DFD     +   E   FD   L LI  
Sbjct: 651 KQLVD---------AYRRIRNTCR--FILGNLADFDPSQNGLPLDEVLSFDRYALDLIQT 699

Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHW 536
              + R+ + A    E +K+   L+ +  +     +
Sbjct: 700 --RHQRM-QEAYSRYEFHKVFHTLHHMCVTDLSAFY 732


>gi|261342659|ref|ZP_05970517.1| valine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288315308|gb|EFC54246.1| valine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 951

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPRDIEQPLYEHWEQQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|163784417|ref|ZP_02179302.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880314|gb|EDP73933.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 833

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 94/253 (37%), Gaps = 19/253 (7%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPI 273
              +      KW+P      +++M++   D      +   +   +F  E+     D   I
Sbjct: 372 GEAIKEIERVKWIPKWGQNRIKSMVENRPDWCISRQRVWGVPIAVFYCEECDAIADEPEI 431

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
            + I NL    Y Y G     + +T +      K     ST    + D   +  D   ++
Sbjct: 432 FEHIANLVE-NYEY-GADLWFEKETHELLPEGYKCKKCGSTNFKKEEDILDVWFDSGVSH 489

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            A     F  + +   D  +Y+ GSD      +   + +  S  +A  + +L     L  
Sbjct: 490 AAVLKTGFWEELKWPAD--MYLEGSDQHRGWFQSSLLESVASYNRAPYDSVLTHGFTLDE 547

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
            G   KMSK AG+ +    ++ + G+D +R  ++    +E +   F  +K  + +     
Sbjct: 548 KGR--KMSKSAGNVVPPEKIIKQYGADILRLWVVTEDYTEDIKIGFNLIKAVADD----- 600

Query: 454 VQYAYARCRSIFR 466
               Y + R+ FR
Sbjct: 601 ----YRKIRNTFR 609


>gi|89893193|ref|YP_516680.1| hypothetical protein DSY0447 [Desulfitobacterium hafniense Y51]
 gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997351|sp|Q250Q6|SYC_DESHY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781676|sp|B8G1U2|SYC_DESHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 477

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 104/327 (31%), Gaps = 45/327 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    HVG+ R  VV D +   + + GY+VT      D   +I         +  Q
Sbjct: 29  CGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGYDVTFVQNFTDIDDKI--------IKRGQ 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               +  +L +  Y G Y K              LN       P   D+ +  M++II+ 
Sbjct: 81  EEGRDPLELAQD-YIGEYFKDAAA----------LNLMPASIHPKATDH-IPEMIEIIKG 128

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L+   + + +              +   +D L   G +    L   ++    +    ++
Sbjct: 129 -LEEQGLAYAV-----------DGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQ 176

Query: 308 -----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 L   +       + P  K  G   +     A        GFD    + G     
Sbjct: 177 NPMDFALWKNAKPGEPFWESPWGK--GRPGWHIECSAMSLKYLGSGFD----IHGGGGDL 230

Query: 363 YVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
                E  +A A      +       +   +      KMSK  G+F T+R +++    + 
Sbjct: 231 VFPHHENEIAQAEGYLHGE-TFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFPGEV 289

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +RF +L       LDFD   ++   K 
Sbjct: 290 IRFYLLGTHYRSPLDFDDENLQMAQKG 316


>gi|238787641|ref|ZP_04631439.1| Valyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724428|gb|EEQ16070.1| Valyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 965

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|331242579|ref|XP_003333935.1| valyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312925|gb|EFP89516.1| valyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1072

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 73/292 (25%), Gaps = 49/292 (16%)

Query: 8   SSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAA----MILSRPLGLDPL 62
            S LK   KE     ++  K +     I      A+  L  N A       ++    +  
Sbjct: 21  KSALKRAAKEAQRAALRAAKGVRQTPEISLTDVQAN--LQANKAGSGSRAAAKKEKAETK 78

Query: 63  TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT- 121
            I  + V  +      D       G+      P  +     S  V    +       G  
Sbjct: 79  VIEPIFVNNVPEGDKKDMSEPMASGY-----HPPAVESAWYSWWVKSGFFEPEFGPDGKI 133

Query: 122 ----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  +     N TG +H+GH     + DTL       G    +    N         
Sbjct: 134 LPAGVFVVPAPPPNVTGSLHIGHALTIAIQDTLVRWNRMLG----KTVLFNPGFDHAGIS 189

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             SV                           V K L         +   EK+L  V  + 
Sbjct: 190 TQSV---------------------------VEKRLFKATGQTRHDLGREKFLETVFSWK 222

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                +I    L  L   +D   +           + +    L  +G +Y  
Sbjct: 223 DDYQARITNQ-LNRLGASYDWGRARFTMDPQLSKAVVEAFVRLHDEGVIYRS 273


>gi|308450410|ref|XP_003088289.1| hypothetical protein CRE_07173 [Caenorhabditis remanei]
 gi|308248160|gb|EFO92112.1| hypothetical protein CRE_07173 [Caenorhabditis remanei]
          Length = 510

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 94/290 (32%), Gaps = 47/290 (16%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSK 297
             I R     + I   +    ++ H      I D+   + ++G    Y  E         
Sbjct: 39  WCISRQRTWGVPIPFFVHKDTNELHPRTAELIEDVAKLIEKEGIDGWYNREAKAFIGDDA 98

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D   + F S               G+  Y     A  + + E      +Y+ G
Sbjct: 99  EQYNAVRDTLDVWFDS---------------GTTHY-----AVLRERAELQDPADLYLEG 138

Query: 358 SDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SD   G+ +     + A+ ++     +L         D    K+SK  G+FI L  ++ +
Sbjct: 139 SDQHRGWFQSSLLTSIAIHKRAPYKALLTHGF---TVDEKGRKLSKSLGNFIPLEDIIKQ 195

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY-VQYAYARCRSIFRQ--AKDIFP 473
           +G+D +R  +         D+ +         N +F  V  +Y R R+  R   A     
Sbjct: 196 LGADGLRLYVASS------DYRYEIAAS----NEIFSRVSDSYRRIRNTLRFLLANLNGF 245

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
               D  P + +    ++      ++   A+  + I+ A      + +  
Sbjct: 246 KPSTDALPVDQLIALDQY------ILQRAADVQKTIQQAYEDMNFHVVTN 289


>gi|303244566|ref|ZP_07330900.1| lysyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485114|gb|EFL48044.1| lysyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 559

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 120/384 (31%), Gaps = 64/384 (16%)

Query: 90  NLYLSPS---YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           N+ +      Y    L        +  +    +  K  +      P+G +HVG+ R  + 
Sbjct: 6   NIIIKNKENIYGGDYLHWADAMAKKIIKKREKQNPKKYLVASGITPSGHIHVGNARETLT 65

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L   +  +G E    + I D    +  +   +   Y++ +    S++P         
Sbjct: 66  ADALYKGLINNGVEAELIF-IADTYDPLRKVYPFLPAGYEKYVGMPLSEIP--------- 115

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                             PEE           +  +K   D L+ L I   ++ S++++ 
Sbjct: 116 -----------------CPEE-----CCKSYAEHFLKPFVDSLEDLGINLTLYKSDENYK 153

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +G       II  L  +  + + +    K    +        +  +   +         +
Sbjct: 154 KGLYD--EKIILALENRDKIRDILNRYRKEPLPEDW-YPLNVVCEKCGKLSTTKVINYNR 210

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSEKKAQ---- 380
            + +  Y  +       K  +G   + + +   +  S +      +A  + +        
Sbjct: 211 ENKTIEYVCSCGHKNTVKPFKGRGKLPWRVDWPARWSIF----NVIAEPMGKDHGTSGGS 266

Query: 381 ----------------INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
                              ++ E ++L      + MS  +G    ++  V     + +RF
Sbjct: 267 YDTGVKIAREIYNYQAPEKIIYEWIQLKIGEKAVPMSSSSGVVFAVKDWVKICHPEILRF 326

Query: 425 MMLWRKNSELLDFDFCKVKEQSKE 448
           ++L  K ++ +DFD   +     +
Sbjct: 327 LLLRSKPTKHIDFDLKAIPNLVDD 350


>gi|218661213|ref|ZP_03517143.1| isoleucyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 534

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL    ++       +  +  F              D+      S  ++T+   D 
Sbjct: 96  VNARILEAFDAEGADAWFAEGAKERFLGNEHDPAKWSQVMDILDVWFDSGSTHTFTLED- 154

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 155 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYDAVLTHGFTM---DEKG 206

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 207 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 257

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE  +++     A 
Sbjct: 258 YRKLRNTIRWMLGTLAHDRGEEIALADLPELE-------QLMLHRLAELDQLVRENYDAF 310

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 311 DFKKIARALIDFANVELSAFYFDVRKD 337


>gi|212709904|ref|ZP_03318032.1| hypothetical protein PROVALCAL_00954 [Providencia alcalifaciens DSM
           30120]
 gi|212687416|gb|EEB46944.1| hypothetical protein PROVALCAL_00954 [Providencia alcalifaciens DSM
           30120]
          Length = 964

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/216 (10%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L +       +  N         +     N TG +H+GH     + DT+ 
Sbjct: 17  TYNPAEIEQSLYTHWEKNGYFRPNGDTSKDSFCVVIPPPNVTGSLHMGHAFQQTIMDTMI 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 77  RYQRMQGKNTLWQTGTDHAGIATQMV-------------------------------VER 105

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I   ++ L    D          G   
Sbjct: 106 KIAAEEGKNRHDYGRDAFIDKIWEWKAESG-GTISQQMRRLGDSVDWDRERFTMDEGLSK 164

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    + ++  +Y G               D +
Sbjct: 165 AVKEAFVRMYKENLIYRGKRLVNWDPKLHTAISDLE 200


>gi|206900296|ref|YP_002251273.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739399|gb|ACI18457.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 824

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 39/131 (29%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +             Y         K     +   P+G +H+GH R   +GD +A
Sbjct: 17  RYNPQEIEPKWQKKWNEDKLYHVTERSDKPKYYTLVMFPYPSGDLHMGHMRNYTIGDVVA 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY V      +  G      A+      ++  Y N + + E  +    +    +
Sbjct: 77  RYYTMKGYNVLNPMGWDAFGQPAENAAIKHKVHPKEWTYKNIARMKEQLFKMGVVYDWDR 136

Query: 212 ELADKYSSELL 222
           E+         
Sbjct: 137 EVTACAPDYYK 147


>gi|148377630|ref|YP_001256506.1| leucyl-tRNA synthetase (leucine-tRNA ligase) [Mycoplasma agalactiae
           PG2]
 gi|148291676|emb|CAL59062.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 779

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +   +   +      K  K  I  +   P+G +H+GH R   +GD LA      
Sbjct: 9   IENKWQNYWENSHYFEPKNDHKLPKKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRK 68

Query: 158 GYEV 161
           G+ V
Sbjct: 69  GFNV 72


>gi|312880110|ref|ZP_07739910.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783401|gb|EFQ23799.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 931

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 81/254 (31%), Gaps = 28/254 (11%)

Query: 269 DPSPIRDIIDNLARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           DP  IR +   +  QG  ++    P         C     + L + T + D     +   
Sbjct: 485 DPEKIRRVAKRVKEQGSDIWWQESPEALLGDLAVCPHCASRNLRKDTDIMD-----VWFD 539

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLC 386
            G        LA  + + E  +   +Y+ GSD   G+ +     + A         VL  
Sbjct: 540 SGVSH-----LAVLETRPELSWPADLYLEGSDQHRGWFQTSLLTSVATRGSAPFRTVLTH 594

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
             +    DG   KMSK  G+    + V+D  G+D +R  +        +      +K   
Sbjct: 595 GFIV---DGEGRKMSKSLGNVTRPQEVIDRYGADILRLWVASTDYRGDVRISETILKNLV 651

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
           +          Y R R+  R         D    P+       + +  +L L+  L +  
Sbjct: 652 E---------TYRRIRNTARFLLGNLEGFD----PQKHRVSRGDMEPLDLWLLARLQDLV 698

Query: 507 RVIENATIAQEPYK 520
             +       E + 
Sbjct: 699 ERVTKGYEDYEFHV 712


>gi|254796861|ref|YP_003081698.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590097|gb|ACT69459.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 854

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                 +    +   K  K  +  +   P+G +H+GH R  V+GD LA      GY V
Sbjct: 33  EQFSQSLWDFSSCDFKRKKYYVLSMFPYPSGKLHMGHLRNYVIGDVLARYKRSQGYNV 90


>gi|218961300|ref|YP_001741075.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729957|emb|CAO80869.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 491

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 103/303 (33%), Gaps = 40/303 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     + +R          I  L  S+ 
Sbjct: 24  APSPTGFLHIGGLRTALYNYLFARKEQGTFILRIEDTDQSRIVP-----GAIENLITSLH 78

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L  ++    EG + G Y++     L  + +  LL      +       ++  M 
Sbjct: 79  NL---GLDFDEGPGKEGDF-GPYIQSQRLNLYQEQAQRLLEKG-FAYPCFCSSETLTNMR 133

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  ++  K   +++D         R   +  +  I      G  Y   L  P     +  
Sbjct: 134 KEQQE--KGEFVKYD---------RRCLALSQSEIRQKMANGEKYVIRLKMPDKHKFRFY 182

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R ++   S+      D+ LLKSDG  TY    LA     +     ++I   G +   
Sbjct: 183 DLIRGEVEMDSS---QSDDQVLLKSDGFPTYH---LAAVVDDHFMQISHIIR--GEEWLS 234

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
              +   +   +  +  +        + L  +    K+SKR  D     +++     +++
Sbjct: 235 STPKHIYLYECLGWEPPKWVH-----LPLILNPDRTKLSKRMNDVSVDSYLLKGYLKEAI 289

Query: 423 RFM 425
              
Sbjct: 290 INF 292


>gi|148555761|ref|YP_001263343.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|189083151|sp|A5VA89|SYL_SPHWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148500951|gb|ABQ69205.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 835

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L      + +      G    R+   K     +E     P+G +H+GH R   +GD LA
Sbjct: 7   HLKADAHWQGVWE--SQGTFQARDDSPKPKSYVLEMF-PYPSGRIHMGHVRNYTMGDVLA 63

Query: 152 SLMAFSGYEV 161
                 G+EV
Sbjct: 64  RYRRMKGFEV 73


>gi|90407186|ref|ZP_01215374.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311762|gb|EAS39859.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 944

 Score = 44.9 bits (105), Expect = 0.041,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 103/322 (31%), Gaps = 60/322 (18%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           KW+P   +  ++ M        I R     + I   +    D+ H      +  I   + 
Sbjct: 444 KWIPTWGEQRIEKMIGNRPDWCISRQRTWGVPIALFVHKETDELHPNSVEMMELIALKIE 503

Query: 282 RQGYVYEGILPPPKSKTTQKCD----MDRKQLLFRSTMVGD---DVDRPLLKSDGSYTYF 334
           ++G      L        +  +     D   + F S         +    +K DGS    
Sbjct: 504 KEGIQAWWDLDVESLLGFEAQEYRKVTDTLDVWFDSGTTHTAVVGMRPEYIKEDGSV--- 560

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                          D  +Y+ GSD   G+ +     + A+  K     VL    V    
Sbjct: 561 --------------ADIDLYLEGSDQHRGWFQSSLMTSMAIKNKAPYKEVLTHGFVV--- 603

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ ++ + V++ +G+D +R  +     +  +     ++  +S +     
Sbjct: 604 DGDGKKMSKSIGNVMSPQVVMNNLGADVLRLWVASTDYTGEITVS-DEILNRSAD----- 657

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
              +Y R R+  R         D                      ++ L  +  ++  A 
Sbjct: 658 ---SYRRIRNTARFLLSNLNGFDPKTDMVASSD------------MIALDRW--IVAQA- 699

Query: 514 IAQEPYKLAFY-LYDLASVFHG 534
            + +   +A Y  Y+L    H 
Sbjct: 700 DSLQKELIADYDAYNL-HAVHK 720


>gi|332021053|gb|EGI61440.1| Putative glutamyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 510

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 101/294 (34%), Gaps = 37/294 (12%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   V + F + +PTG +H+G  R A+     A   + +G  + R   I D   Q  T+
Sbjct: 19  FKKYHVRVRF-APSPTGHLHLGGLRTALYNYLFAR--SNNGTFILR---IEDT-DQTRTI 71

Query: 178 ALSVFWRYQQALYNN---DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             ++       L+     D D   G     Y++    EL  +   +LLN     +     
Sbjct: 72  PGAIEKIQDDLLWAGIISDEDPTRGGPVSPYIQSSRLELYKEQVLKLLNNGSAYYC---- 127

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            +  +  + ++R +                +        +D +  + ++   Y       
Sbjct: 128 -FCTEKRLDLLRKEAMKCGQIP-------KYDNRCRHFTKDEVKEMIKKNLTY---CIRF 176

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           K  +T +   D         +   + D  ++KSDG  TY  A++       +  F  + +
Sbjct: 177 KLSSTPETFHDLVYGDVLHDITKSEGDPVIIKSDGYPTYHFANV------VDDHFMEISH 230

Query: 355 VM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           V+ G +      +   +  A           +   + L  +    K+SKR GD 
Sbjct: 231 VLRGVEWQVSTSKHIMLYKAFGWNPP-----IYGHLPLIMNADGSKLSKRQGDI 279


>gi|302345042|ref|YP_003813395.1| glutamate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149604|gb|ADK95866.1| glutamate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 538

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 100/290 (34%), Gaps = 45/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       +      +  R     E YI D+   +   
Sbjct: 44  APSPTGPLHIGGVRTALYNYLFARQHGGKLIFRIEDTDSNRFVPGAEEYILDSFDWLGI- 102

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                       ++       G   G Y +   +++  KY ++LL   +  ++       
Sbjct: 103 -----------KFDEGVSF--GGEHGPYRQSERRDIYKKYVNQLLEAGK-AYIAFDTPEE 148

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A  K I       N Q+D         R   +  ++ +++L   G  Y         +
Sbjct: 149 LDAKRKEIE------NFQYDAHTRLQ--MRNSLTMSKEEVESLIEDGQQYVVRFKIEPGE 200

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R  +  +S ++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 201 EVHVNDIIRGDVCIKSDILD---DKVLFKSADELPTYH---LANIVDDHLMEISHVIR-- 252

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   + +        L+ L  +G   K+SKR GD
Sbjct: 253 GEEWLPSAPLHVLLYRAFGWEDSMPRFAHLPLL-LKPEGKG-KLSKRDGD 300


>gi|237747004|ref|ZP_04577484.1| valyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378355|gb|EEO28446.1| valyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 933

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 65/228 (28%), Gaps = 45/228 (19%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ + K           +  +L    +   I+    N TG +H+GH     + D L  
Sbjct: 7   FEPAEIEKHWREEWEKRGYFRASLDENKSSFAIQLPPPNVTGTLHMGHAFNQTIMDGLVR 66

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G+        + AG   QI                             V  + + 
Sbjct: 67  YHRMRGFNTAWIPGTDHAGIATQI-----------------------------VVERQLD 97

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +   ++     +   EK+L  V ++  ++    I   ++ +    D         +   
Sbjct: 98  AQNISRH-----DLGREKFLEKVWEWKEKSG-STITGQMRRMGTSPDWDREYFTMDKTRS 151

Query: 271 SPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
             + D+   L  +G +Y G        +L    S      + +   + 
Sbjct: 152 GTVADVFVRLYEEGLIYRGKRLVNWDPVLGTAVSDLEVVSEEENGSMW 199


>gi|222093808|ref|YP_002527857.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221237855|gb|ACM10565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 626

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 81/292 (27%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++  ++    EE  L +     V  ++  I++  + ++I +D FI            + 
Sbjct: 19  DEHGQKIQKKAEE--LNVTPQAYVDNIVAGIKELWEKMDISYDDFI--RTTEDRHKDVVE 74

Query: 275 DIIDNLARQGYVY----------------------EGILPPPKSKTTQKCDMDRKQLLFR 312
            I   L  QG +Y                      + I+   K    +  D      L R
Sbjct: 75  KIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVR 134

Query: 313 STMV----GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG--- 348
                   G  VDR L   + +  +                    DLA  +  ++ G   
Sbjct: 135 EESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRV 194

Query: 349 ---FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                ++IYV              G+++   Y K   A    V ++  + + +   ++ +
Sbjct: 195 PGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILM 254

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 255 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 306


>gi|212704133|ref|ZP_03312261.1| hypothetical protein DESPIG_02188 [Desulfovibrio piger ATCC 29098]
 gi|212672493|gb|EEB32976.1| hypothetical protein DESPIG_02188 [Desulfovibrio piger ATCC 29098]
          Length = 895

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +   +G   +I     N TG +H+GH     + D L        
Sbjct: 24  EARWRDHWQDNRTFTPDPDAQGEPFSIVIPPPNVTGALHIGHALNQTLIDVLCR------ 77

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                    + +  L+   +D        V  + +      K  
Sbjct: 78  ---------------------HARQKGKNVLWVPGTDHAGIATQNVVERALA-----KEG 111

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E ++  V  +      +I+   ++AL    D          G  + +R +  
Sbjct: 112 KTRQDLGREAFIERVWQWREDYGHRILNQ-IRALGASVDWTRLRFTMDEGLSAAVRKVFV 170

Query: 279 NLARQGYVYEG 289
            L  +G +Y+G
Sbjct: 171 QLYNEGLIYKG 181


>gi|150864475|ref|XP_001383302.2| glutamyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
 gi|149385731|gb|ABN65273.2| glutamyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
          Length = 491

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 88/281 (31%), Gaps = 29/281 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G +        D    +     +++   +  
Sbjct: 13  APSPTGYLHLGSLRTALYNYLLA---KNTGGQFILRLEDTDRTRLVPDAEQNIYDSLKWC 69

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D    EG   G Y +    E+  KY+  L++          KD      +  +R+ 
Sbjct: 70  NLTIDEGPNEGGPYGPYRQSERMEIYKKYAQILVDSGHAYRCVCSKDR-----LLHLRET 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR--DIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              L     +       H  +   I   D +         YE            +   + 
Sbjct: 125 ATKLKPPTTVTYDRKCLHEQEGQLIDSNDYVIRFK-SPDTYEPFKDLVHGNLNLQPQYNY 183

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
               +         D  ++KSDG  TY  A++      +     ++I   G +      +
Sbjct: 184 SDRRYD--------DFVIVKSDGMPTYHFANV---VDDHLMKITHVIR--GEEWLPSTPK 230

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             A+  A      +        + L       K+SKR+GD 
Sbjct: 231 HIALYNAFGWTPPKFTH-----IPLLTSLEDKKLSKRSGDI 266


>gi|120437626|ref|YP_863312.1| glutamyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|187470992|sp|A0M6K0|SYE_GRAFK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|117579776|emb|CAL68245.1| glutamyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 505

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 90/287 (31%), Gaps = 38/287 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          GD +  +      +  +  Y+  A    + +  
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAKKHGGDFVLRI-----EDTDQNRYVEGAE---DYIIE 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++ W           +   G Y     K   +E A+K       +           +   
Sbjct: 62  ALNWCGIPYDEGPGKEKGFGPYRQSERKDQYREYAEKLIKSGNAYYA---------FDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +   R D +                +   S  ++ +         Y      P+ +T 
Sbjct: 113 DELDGHRKDHEEKGKTFIYNWHNRQKLKNSLSLSQEEVQEKLDGEEDYVIRFKSPQDETL 172

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R  +   + ++    D+ L KSDG  TY    LA     +     ++I   G +
Sbjct: 173 HLKDVIRGDMEIDTNILD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--GEE 224

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               +     +  A      Q   L   L    +     K+SKR G+
Sbjct: 225 WLPSLALHYMLYRAFGWNAPQFAHLPLILKPQGKG----KLSKRDGE 267


>gi|89898140|ref|YP_515250.1| valyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722316|sp|Q255D3|SYV_CHLFF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|89331512|dbj|BAE81105.1| valyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 940

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 60/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  L   L +       +            I     N TG +H+GH     + D L   
Sbjct: 11  DPKGLEDKLYAFWEDAGMFTAQSASNKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+EV      + AG    T+                               V + L
Sbjct: 71  KRMSGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   ++F  E++L  V ++  ++   II   L+ L    D               +
Sbjct: 100 YSSLGKRRIDFSREEFLEYVWEWKEKSE-GIILSQLRQLGCSCDWSRLRFTMEPLASRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G++Y G          Q    D +
Sbjct: 159 KKAFKVLFDRGHIYRGYYLVNWDPVLQTALADDE 192


>gi|319899026|ref|YP_004159119.1| glutamyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402990|emb|CBI76545.1| glutamyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 476

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 102/308 (33%), Gaps = 62/308 (20%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTREYYINDAGAQINTL 177
            I   + +PTG +H+G  R A+     A       L+     +  R        A +  +
Sbjct: 3   VITRFAPSPTGFLHIGSARTALFNWLYAKHTGGKMLLRIEDTDRERS-----TEAAVKAI 57

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              ++W       +  S            + + ++L  K       +   + L  +++ +
Sbjct: 58  IEGLYWMGLNYDGDPISQFK----RAERHRQIAEQLV-KNGKAYYCYATPEELAEMRESA 112

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +    D         D  ISE       P  I+ +I             +  P+  
Sbjct: 113 CAKGLPPRYD-----GRWRDRDISEA------PKGIKPVI------------RIKAPQDG 149

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D  +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I   G
Sbjct: 150 ETILHDRVQGDIRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGITHIIR--G 201

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH     R   +  A+        + +   + L       K+SKR G           +
Sbjct: 202 NDHLTNAARQAIIFNAMGWD-----IPIMAHIPLIHGENGAKLSKRHG----------AL 246

Query: 418 GSDSVRFM 425
           G D+ R M
Sbjct: 247 GIDAYRKM 254


>gi|291537672|emb|CBL10784.1| methionyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 665

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 121/406 (29%), Gaps = 68/406 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I + S  P    H+G+    V+ D +A      GY+V  +   ++ G +I   A  
Sbjct: 9   MTTAIAYTSGKP----HIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQEKAEK 64

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                ++ + N   ++         +  +     D +        E++   I K    + 
Sbjct: 65  AGITPKEYVDNVAGEVK-------RIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKG 117

Query: 241 MMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              I +   + L     + F +E     G        +     + Y ++      K    
Sbjct: 118 --DIYKGSYEGLYCTPCESFWTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADKLINY 175

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMI 353
                +  Q + R   + ++   P             DL   +  +  G    FD  +++
Sbjct: 176 INEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFSWGIPVDFDPKHVV 225

Query: 354 YVM-------------GSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-- 395
           YV               +D      + K   A    + +   + + +   +  +  D   
Sbjct: 226 YVWLDALTNYITKIGYDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPL 285

Query: 396 ------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
                          KMSK  G+ I    + D  G D+ R+ +L            +  V
Sbjct: 286 PKQVFGHPWLLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLV 345

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFP 481
            E+   +    +     R  S+  +  D       +  ++D DL  
Sbjct: 346 IERYNSDLANILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKA 391


>gi|225376548|ref|ZP_03753769.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM
           16841]
 gi|225211585|gb|EEG93939.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM
           16841]
          Length = 665

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 71/482 (14%), Positives = 141/482 (29%), Gaps = 92/482 (19%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I + S  P    H+G+    V+ D +A      GY+V  +   ++ G +I   A +
Sbjct: 9   MTTAIAYTSGKP----HIGNTYEIVLADAIARYKRAEGYDVYFQTGTDEHGQKIQEKAEA 64

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                ++ +     ++         +  +     D +        E+    I K    Q 
Sbjct: 65  AGITPKEFVDGVAGEVKA-------IWDLMNTSYDNFVRTTDADHEKCVKKIFKKLYDQG 117

Query: 241 MMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              I +   + L     + F +E     G        +     + Y ++      +    
Sbjct: 118 --DIYKGAYEGLYCTPCESFWTESQLVDGKCPDCGREVKPAKEEAYFFKMSKYADRLIDY 175

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMI 353
                +  Q + R   + ++   P             DL   +  +  G    FD  +++
Sbjct: 176 INTHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFSWGIPVDFDPKHVV 225

Query: 354 YVM-------------GSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG--- 395
           YV                D S   + K   A    + +   + + +   +  +  D    
Sbjct: 226 YVWLDALTNYITKIGYDPDGSSELFQKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLP 285

Query: 396 -----------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
                         KMSK  G+ I    +V   G D+ R+ +L            +  V 
Sbjct: 286 KQVFGHPWLLQGGDKMSKSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGVITWELVI 345

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVIPQESEFD---- 492
           E+   +    +     R  S+  +  D          ++D DL       ++   +    
Sbjct: 346 ERFNSDLANILGNLVNRTISMSNKYFDGVVRKTGAAEEVDEDLKAVVTGTRDKVQEKMDK 405

Query: 493 -------TSELQLIVHLAEY-----PRVIENATIAQEPYKLAFYLYDL-------ASVFH 533
                  T+   L     +Y     P V+       +  +LA  LY+L       A + H
Sbjct: 406 LRVADAITAVFDLFRRCNKYIDETTPWVLAKDEADHD--RLAEVLYNLTESITIGAGLLH 463

Query: 534 GH 535
             
Sbjct: 464 SF 465


>gi|162139459|ref|YP_001173543.2| valyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 944

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 58/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +         S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIETSWYQTWESNNYFAPQGSGEPYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRWR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                               V ++LA
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMV-------------------------------VERQLA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +  +   +   EK+L  V  +  ++   I R  ++ L    D          G    ++
Sbjct: 94  AQ-GTSRHDLGREKFLEKVWQWKEESGGNITRQ-IRRLGSSVDWSRERFTMDDGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|148255338|ref|YP_001239923.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407511|gb|ABQ36017.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 955

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 53/191 (27%), Gaps = 32/191 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R  L          GR          I     N TG +H+GH     + D L       G
Sbjct: 14  RMSLVWEDARAFSAGRPDRRDADPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V  +   + AG     +                               V ++L ++  
Sbjct: 74  RDVLWQPGTDHAGIATQMV-------------------------------VERQLMERQQ 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                   EK+L  V  +  ++   II   LK L    D          G    +  +  
Sbjct: 103 PGRREMGREKFLARVWQWKDESGGTIINQ-LKRLGASCDWGRERFTMDEGLSKAVVKVFV 161

Query: 279 NLARQGYVYEG 289
            L R G +Y+ 
Sbjct: 162 ELHRAGLIYKD 172



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     ++     V +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFMKEVPFSTVYIHALV---RDEKGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    ++DE G+D++RF +
Sbjct: 579 VIDPLALIDEHGADALRFTL 598


>gi|16081844|ref|NP_394239.1| leucyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|14423940|sp|Q9HK31|SYL_THEAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10640056|emb|CAC11908.1| leucyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 910

 Score = 44.9 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 68/232 (29%), Gaps = 39/232 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++    GI   +    K   + + +   N  G +HVGH R   +GD +A       
Sbjct: 21  AKWQNAWDRDGIFVPKMDGRKKFMITVPWPYTN--GSLHVGHGRTYTLGDIIARYKRSRN 78

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y V                   +F               E    G        +L   Y 
Sbjct: 79  YNV-------------------LFPMGFHQSGTPILAFSERIRAGD---RSTIDLYTSYL 116

Query: 219 SELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDI---FISEDDFHRGDPSPI 273
            E      +  +   KD           I +D K L    D    F S D+F++     +
Sbjct: 117 KEYGEKDIDALIESFKDPKNIADYFSNAIINDFKHLGYSIDWTRRFTSADEFYQK---FV 173

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     L  +G V +G  P   S       ++    +    +   D D+  +
Sbjct: 174 QWQFRRLNEKGLVKQGRYPILYS-------LEDDNAVGEDDIKDGDTDKVTI 218


>gi|297565942|ref|YP_003684914.1| glutamyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850391|gb|ADH63406.1| glutamyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 476

 Score = 44.9 bits (105), Expect = 0.043,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 96/286 (33%), Gaps = 29/286 (10%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +  ++ +PTG  HVG    A+     A     +G +        D      T    + 
Sbjct: 1   MVVTRIAPSPTGDPHVGTAYQALFNYVFA---KQNGGKFIVRIEDTDRTRYNPTSQQRIL 57

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +      D    +G   G Y++     +  +++  LL+          + +     +
Sbjct: 58  EMLEWIGLPPDESPTKGGPNGPYIQSERLPIYQRHAQMLLDSG-----AAYRAFDTPEEL 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R++ +    Q      E  ++R      ++  D  A  G  +   L  P    T   
Sbjct: 113 AAMREEARKAGRQ------EQGYNRRYRDYPKEESDRRAAAGEPFVIRLKVPLEGKTIVH 166

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F +  +    D+ +LK+DG  TY    LA     +  G  ++I    ++   
Sbjct: 167 DLLRGPVEFDNAQLD---DKVILKADGYPTYH---LAAMVDDHLMGVTHVIR---AEEWL 217

Query: 363 YVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                   +  A   ++            L R+    K+SKR  D 
Sbjct: 218 TSTPFHVLLLRAFGWEEPVWCH-----TPLLRNPDKSKLSKRKSDT 258


>gi|84997001|ref|XP_953222.1| valyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304218|emb|CAI76597.1| valyl-tRNA synthetase, putative [Theileria annulata]
          Length = 774

 Score = 44.9 bits (105), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 88  FINLYLSPS------------YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135
           F+N  ++              Y    +S  +  G     N   +GT   I     N TG 
Sbjct: 25  FLNFNINQDSTSLSHGSVNKLYDSTFISDSITKGENSLNNDKSEGTVRIIT-PPPNVTGD 83

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +HVG+    V  D   + +   G++V    + ND   Q           +Q+   N   +
Sbjct: 84  LHVGNLLNVVCCDVYKNYLKLKGFDVN-INFSNDHAGQ----------SFQKVFDNTYPN 132

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
           LP G Y     K + + + +++  ++     + ++     D  V+++   +    K L +
Sbjct: 133 LPSGSYKMEMAKLMCQNIRNRHLEDIRKLGIDWEYGHFTMDKHVESLANSVLQRFKTLGL 192

Query: 255 QHDIF 259
             + +
Sbjct: 193 LKEKY 197


>gi|226943293|ref|YP_002798366.1| valyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226718220|gb|ACO77391.1| valyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 944

 Score = 44.9 bits (105), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 58/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   S   +     G+   + I     N TG +H+GH     + D L    
Sbjct: 7   PHAIESRWYAEWESKNYFAPQGSGEPYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                               V ++LA
Sbjct: 65  RMQGRNTLWQPGTDHAGIATQMV-------------------------------VERQLA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                +      EK+L  V ++  Q+   I R  ++ L    D          G    ++
Sbjct: 94  A-LGLDRHALGREKFLDKVWEWKEQSGGTITRQ-IRRLGSSVDWSRERFTMDEGLSEAVK 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +    L   G +Y G               D +
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 184


>gi|320547575|ref|ZP_08041860.1| glutamate--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447650|gb|EFW88408.1| glutamate--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 485

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 100/302 (33%), Gaps = 44/302 (14%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDA 170
             K+ + + + +PTG +H+G+ R A+          GD +  +      +  R+ ++ D 
Sbjct: 2   PKKIRVRY-APSPTGLLHIGNARTALFNYLYARHYGGDFVIRI-----EDTDRKRHVED- 54

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                           + L  +  + P+ +    Y +    ++  KY  +LL   E K  
Sbjct: 55  -------GERSQLENLKWLGMDWDESPQTH--EKYRQSERLDIYQKYIDQLL--AEGKAY 103

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                    A  +  ++         + F+   +  +         I     +G +    
Sbjct: 104 KSYVTEEELAAERERQEAAGETPRYINEFLGMSEEEK------AAYIAERQAKGIIPTVR 157

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L   +S   +  D+ +  + F    VG   D  + K DG  TY   + A     +     
Sbjct: 158 LAVNESGIYKWHDIVKGDIEFEGGNVG--GDWVIQKKDGYPTY---NFAVVIDDHLMEIS 212

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++I   G DH     +   V  A+  +  +       +  +       K+SKR  + +  
Sbjct: 213 HVIR--GDDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQF 266

Query: 411 RH 412
             
Sbjct: 267 IE 268


>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 465

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 119/377 (31%), Gaps = 52/377 (13%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  KV +           H+G+ R  +V D L   + + GY+V       D   +I  
Sbjct: 16  PIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYDVKFVQNFTDVDDKIIN 75

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKYSSELLNFPEEKWLPIV 233
            ++      ++ +   +       Y   Y K    +G   AD +     + PE       
Sbjct: 76  RSI------EEGITAAEVA---DKYIAEYFKDADALGIRRADVHPRVSDHMPE------- 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                  ++++I++ L+A  + +++              +   +D+    G + +  +  
Sbjct: 120 -------IIEMIKE-LEARGLAYNV-----------DGNVYYQVDHFHDYGKLSKQSIDD 160

Query: 294 PKSKTTQKCDMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            KS      + +++      L  +        + P     G   +     A  +    + 
Sbjct: 161 LKSGARIDVNDEKRSPLDFALWKKKKDGEPYWESPW--GQGRPGWHIECSAMSR----KH 214

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               I + G          E   A  SE           +   Y +    KMSK  G+F 
Sbjct: 215 LGESIDIHGGGQDLIFPHHENEIAQ-SEGSCGCKFANYWVHNGYININNEKMSKSKGNFF 273

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R +      + VR  ML       ++F    + +   +N +  +  A  +   +    
Sbjct: 274 TVRDIAKHYDLEVVRMFMLMAHYRSPVNFSDELLGQA--QNALERLYNAKYQMEYLLENN 331

Query: 469 KDIFPDLDFDLFPRNVI 485
           K      D   +  N+ 
Sbjct: 332 KSEAASEDEKTWMDNLA 348


>gi|295097701|emb|CBK86791.1| valyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 951

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPRDIEQPLYEHWEQQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|268608186|ref|ZP_06141913.1| glutamyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 546

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 137/395 (34%), Gaps = 39/395 (9%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           +  +  +PTG +H+G+   A++G+ LA       ++    +Y          L +     
Sbjct: 36  VTRIGPSPTGFVHLGNLYNAIIGERLA-------HQSGGTFY----------LRIEDTDN 78

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-----PIVKDYSVQ 239
            ++     ++ +    Y GV+         D  +       + K +      ++ +  + 
Sbjct: 79  KREVEGAVETVINAMDYFGVHFDEGATAEGDNGNYGPYRQRQRKEIYHVFAKLLTEKGLA 138

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKT 298
               +  ++L+A+  +      E+    G  +  RD+ I+ +       +  +   +   
Sbjct: 139 YPCFMTAEELEAIR-EQQTANKENPGVYGKYAKCRDLTIEEIKANIEAGKEWVLRYRGTE 197

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-G 357
           T+        +  +  M  +++D  LLKSDG  TY  A +       +  F +  +V+ G
Sbjct: 198 TEDYISVDDAVRGKLEMPANNMDFVLLKSDGIPTYHFAHV------IDDHFMHSTHVIRG 251

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
            +    +     +   +  +          +          K+SKR    + L +   E 
Sbjct: 252 EEWISSLPMHVELFKVLGWEMPVYCHTATLMKIDEETNGKRKLSKRKDPELALSYYQQEG 311

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL- 475
           +  D+V   +L   NS   ++     +    + P    + + +       + +DI  ++ 
Sbjct: 312 ISKDAVWEFLLTLLNSNYEEWRIANPEADYHDFPYTLEKMSVSGALVDLDKMRDISKNVI 371

Query: 476 ---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                +    + +    E++T    LI     YP 
Sbjct: 372 CRMSAEKVRDSWLEWCEEYNTEYADLIKK---YPE 403


>gi|115452871|ref|NP_001050036.1| Os03g0335600 [Oryza sativa Japonica Group]
 gi|113548507|dbj|BAF11950.1| Os03g0335600 [Oryza sativa Japonica Group]
          Length = 572

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 55/195 (28%), Gaps = 32/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + K   +   S   +  +         I     N TG +H+GH     + D +    
Sbjct: 88  PSTVEKSWYAWWESSGYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWR 147

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SGY       ++ AG     +      R +    ++    P+ +   V       +  
Sbjct: 148 RMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIG--PDNFVCEV------LKWK 199

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y   +LN                         L  L    D             + + 
Sbjct: 200 ERYGGTILNQ------------------------LHRLGASLDWSREAFTMDEQRSNAVT 235

Query: 275 DIIDNLARQGYVYEG 289
           +    L ++G +Y  
Sbjct: 236 EAFVRLHKEGLIYRD 250


>gi|76800878|ref|YP_325886.1| leucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556743|emb|CAI48317.1| leucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 880

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 26/191 (13%)

Query: 333 YFAADLAYFKCKYERGFDNMI---YVMGSDH-------SGYVKRLEAVAAAVSEKKAQIN 382
           Y +  L       ER  D M    YV G +H       S +V ++ A    +  ++   N
Sbjct: 494 YVSPGLETAAFDRERANDWMPVDQYVGGIEHAVMHLLYSRFVTKVLADHEDLDHREPFEN 553

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           +L   +V+L       KMSK  G+ ++ + +VDE G+D+ R  M+     E    DF   
Sbjct: 554 LLAQGMVQL----EGEKMSKSKGNVVSPQAIVDEYGADTARLFMMQAAQPER---DFDWT 606

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +E  +    F  Q          ++    +   D +                E  + V  
Sbjct: 607 EEGVRSAYTFLTQ---------LKELVAAYAGGDIETAAEADAVAGYIESEREATVAVAT 657

Query: 503 AEYPRVIENAT 513
            EY  ++ N  
Sbjct: 658 EEYEELVFNTA 668


>gi|303233314|ref|ZP_07319985.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480614|gb|EFL43703.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 877

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                     +   K  +  +E     P+G +H+GH R   +GD +A  +   GY+V
Sbjct: 30  WEKHNTYQTPSSSSKPKQYVLEMF-PYPSGDLHMGHARNYTIGDVMARQLHMRGYDV 85



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 20/156 (12%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           Y+ G +H+     Y +    V   +           LLC+   + RD     MSK  G+ 
Sbjct: 568 YIGGIEHAILHLLYSRFWTKVMRDLGLCAIDEPFCHLLCQG--MVRDHNGETMSKSKGNV 625

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY-----VQYAYARCR 462
           +    V++  G+D++R  +L+   +E  DFD+ +   Q     +        Q A+    
Sbjct: 626 VPPASVIEPYGADTLRLAILFIAPAEK-DFDWDEDVVQGTNRFIKRAWKQVWQLAHIARS 684

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                  D   ++         +         E  L
Sbjct: 685 HDTHLLSDPASEITLSDAQLAALTAP------ERAL 714


>gi|255318810|ref|ZP_05360036.1| valyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262378929|ref|ZP_06072086.1| valyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304066|gb|EET83257.1| valyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262300214|gb|EEY88126.1| valyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 963

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 66/220 (30%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K           +  +   KG    I     N TG +H+GH     + 
Sbjct: 7   NIATTYDPTEIEKKWYQTWEERGYFKPSE--KGESFCIMIPPPNVTGSLHMGHGFNNAIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L      SG                           +  L+   +D        V  +
Sbjct: 65  DALTRYNRMSG---------------------------KNTLWQPGTDHAGIATQMVVER 97

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  +   ++     +   +K++  V ++  Q+   I R  ++ L    D          
Sbjct: 98  QLAAQNISRH-----DLGRDKFIEKVWEWKEQSGGNITRQ-IRRLGSSVDWSRERFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L  +G +Y G          Q    D +
Sbjct: 152 GLSNAVKEVFVKLHEEGLIYRGKRLVNWDPKLQTALSDLE 191


>gi|221214935|ref|ZP_03587903.1| valyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165162|gb|EED97640.1| valyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 955

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 79/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + +      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIEAQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   EK++  V ++  ++    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREKFVERVWEWKQKSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVAVMVHPEDERYRHLI 244


>gi|89052902|ref|YP_508353.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999652|sp|Q28VD4|SYL_JANSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|88862451|gb|ABD53328.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 863

 Score = 44.5 bits (104), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   +G         K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 12  KWQKAWAEAGTFTASMEGNKPKYYVLEMF-PYPSGRIHIGHVRNYTMGDVIARHKKAMGH 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|329113410|ref|ZP_08242191.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697235|gb|EGE48895.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 512

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 104/334 (31%), Gaps = 73/334 (21%)

Query: 159 YEVTREYYIN---DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--- 212
           Y  T  YY+N     G    ++A  V  R+ +   +    L      G  ++   +    
Sbjct: 6   YVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQANGI 65

Query: 213 ----LADKYSSELLNFPEEKWLPIVKDY----------SVQAMMKIIRDD-------LKA 251
                ADK S++  N  +   +    D+          S QA+ K + D+        + 
Sbjct: 66  DAKSFADKVSADFRNMADAMNIS-YDDFIRTTEPRHITSTQALWKKVADNGAIYLGAYEG 124

Query: 252 LNIQHD-IFISEDDFHRGDPSP-----------------------IRDIIDNLARQGYVY 287
                D  F  ED+   G                            +D +  L      +
Sbjct: 125 WYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNPDF 184

Query: 288 EG------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            G       +     +  +   + R    +   + GDD     +  D    Y +A L Y 
Sbjct: 185 LGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSA-LGY- 242

Query: 342 KCKYERGFDNM------IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
               +     M      ++++G D    + R  AV        A I +        +   
Sbjct: 243 ---PDTSAPRMAFWPANLHLVGKD----IARFHAVYWPAFLMAAGIELPRKVFANGWWTI 295

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ +  R +V E G D+VRF +L  
Sbjct: 296 EGQKMSKSLGNVVDPRDLVKEFGLDAVRFFLLRE 329


>gi|255311103|ref|ZP_05353673.1| valyl-tRNA synthetase [Chlamydia trachomatis 6276]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKQRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|237710459|ref|ZP_04540940.1| isoleucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229455181|gb|EEO60902.1| isoleucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 1162

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSDS+R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 QYGSDSLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|188527937|ref|YP_001910624.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144177|gb|ACD48594.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 872

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 99/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLK------SDGSYTY 333
               K        R + LF  + +             G  V  PL+       +D    +
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIHRKIPIIAD---LH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
              +      K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LKARDKVVEKLKENA 333


>gi|146313284|ref|YP_001178358.1| valyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145320160|gb|ABP62307.1| valyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 951

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPRDIEQPLYEHWEEQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|157368805|ref|YP_001476794.1| valyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|157320569|gb|ABV39666.1| valyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 958

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 67/222 (30%), Gaps = 36/222 (16%)

Query: 90  NLYLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           N +L  +Y    + + L     +   +  N         I     N TG +H+GH     
Sbjct: 5   NSHLDTAYDPKEIEQKLYDHWENQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQT 64

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           + DT+       G     +   + AG     +                            
Sbjct: 65  IMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV---------------------------- 96

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              V +++A + +    ++  + ++  +  +  ++   I R  ++ L    D        
Sbjct: 97  ---VERKIAAEENKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTM 152

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             G  + +R++   L ++  +Y G          +    D +
Sbjct: 153 DEGLSNAVREVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 194


>gi|94676934|ref|YP_588734.1| valyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220084|gb|ABF14243.1| valyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 957

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +         I     N TG +H+GH     + D L   
Sbjct: 9   NPHDIEQSLYKHWEKQGYFRPHSNTCNNSYCIMIPPPNVTGGLHMGHAFQHTIMDILIRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V  ++
Sbjct: 69  HRMLGKNTLWQVGTDHAGIAAQMI-------------------------------VEHQI 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      ++  + ++  +  +   +   +I + ++ L    D          G    +
Sbjct: 98  FAEEGKTRQDYGRKAFIEKIWQWKALSG-NLISNQIRRLGCSVDWERERFTLDEGLSDAV 156

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          Q    D +
Sbjct: 157 KEVFVRLYQENLIYRGKRLVNWDPKLQTAISDLE 190


>gi|15922576|ref|NP_378245.1| cysteinyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|21264015|sp|Q96YC3|SYC_SULTO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15623366|dbj|BAB67354.1| 471aa long hypothetical cysteinyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 471

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 124/391 (31%), Gaps = 48/391 (12%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G +       +   V +          +H+GH R  V  D +   +   GY V R   I 
Sbjct: 13  GRKIQPLETVEPQTVKMYVCGPTVYDYLHIGHGRTFVSFDAMVRYLRLRGYNVIRVQNIT 72

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D   +I   A              D                  E+ D Y+ + LN   + 
Sbjct: 73  DIDDKIIKKAQE---------TGKD----------------WTEIVDFYTKDYLNALTQL 107

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            + I +   V   +K I + ++ L  +   ++            +   +D+    G +  
Sbjct: 108 KIEIDQHPRVTYHIKEIINFIQKLIDKGHAYV-------AKSGSVYFDVDSFPSYGLL-S 159

Query: 289 GILPPPKSKTTQKCDMDRK----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
           G      ++  +     +      L           + P  K    +    + ++     
Sbjct: 160 GTKKEEWNQGEEFVKEKKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSMRYLG 219

Query: 345 YERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            E       I ++   H     + EA+   + ++  +  V +  L          KMSK 
Sbjct: 220 EEFDIHGGGIDLIFPHHENERAQSEAL---LGKQWVKYWVHVSYLTI-----RKEKMSKS 271

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I L   + + G   +R+  L       LDF+   +++   +N +  ++ A +  R 
Sbjct: 272 LGNIIPLNEALKKWGPSVLRYWYLSSHYRSSLDFNEDSLEQA--KNALTRLKDAISIIRD 329

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           + ++    +   +     RN++     F  +
Sbjct: 330 VIKEGPKYYSKDEDIQVQRNIVELIKSFHAA 360


>gi|323704372|ref|ZP_08115951.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536438|gb|EGB26210.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 878

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +  +I    +  G    +  + K     +     N TG +H+GH     + D +    
Sbjct: 10  KEFEDRIYKEWMEKGYFTPKIDLNKKPFTIV-IPPPNITGQLHMGHALDNTMQDIIIRWK 68

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+           G+   ++A  V    Q      ++ L +             +  
Sbjct: 69  RMQGFVTLWIP-----GSDHASIATEVKVLDQ---IREETGLTKRDIGREKFLERAWQWK 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY + +L+                         LK L    D               +R
Sbjct: 121 EKYENRILDQ------------------------LKKLGSSCDWTRKRFTMDEALSKAVR 156

Query: 275 DIIDNLARQGYVYEG 289
           ++  +L  +G +Y G
Sbjct: 157 EVFVSLYEKGLIYRG 171



 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 39/196 (19%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ I    ++++ G+D++RF ++        D  F   K ++  N 
Sbjct: 516 LVRDSQGRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGN-DMRFSDDKVEASRN- 573

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                           +  +    +  +L   +        + ++  ++  L     V++
Sbjct: 574 -------------FANKLWNASRYVMLNLTSDDTTLYLENLNIADKWILTRL---NDVVK 617

Query: 511 NATIAQEPYKLAFY--------LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
             T   E      Y        LYD L S F   +      P L       +K+T   L 
Sbjct: 618 EVTENLE-----KYELGIAAGKLYDFLWSEFCDWY-IELSKPVLYGDDFEAKKITKSVL- 670

Query: 562 LVHAVASIINSGLNII 577
                  ++++ L ++
Sbjct: 671 -----RYVLDNTLRLL 681


>gi|317178266|dbj|BAJ56055.1| leucyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+        K           +         K  I  +   P+G +H+GH R   +G
Sbjct: 3   FINI-------EKKWQEFWWKNKSFEPKDDFNFPKKYILSMLPYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|296435818|gb|ADH17992.1| valyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437678|gb|ADH19839.1| valyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140177|gb|ADH96935.1| valyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKQRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|283786940|ref|YP_003366805.1| valyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282950394|emb|CBG90042.1| valyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 951

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESLESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|241663923|ref|YP_002982283.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865950|gb|ACS63611.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 959

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTYFAADLAYFK 342
           L    ++  ++  ++  Q L    ++GD+ D      D        G+  +     ++  
Sbjct: 513 LLEQVAQRIEQSGIEAWQTLDPRELLGDEADMYEKNRDTLDVWFDSGTTHWHVIRGSHAA 572

Query: 343 CKYERGFD----NM--IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             Y+   D     +  +Y+ GSD   G+       A+ +  K     +L         DG
Sbjct: 573 DLYDASADLPDGRLADLYLEGSDQHRGWFHSSLLTASMLYGKPPYKGLLTHGF---TVDG 629

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ I  + + +++G++ +R  +     S  L      +K   +        
Sbjct: 630 EGRKMSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISDEILKRVVEG------- 682

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             Y R R+  R       D D          Q  E D   + L
Sbjct: 683 --YRRIRNTLRFLLANLTDYDHAKHALPT-EQWLEIDRYAVAL 722


>gi|237802725|ref|YP_002887919.1| valyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273959|emb|CAX10751.1| valyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKQRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|240145103|ref|ZP_04743704.1| methionine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202775|gb|EEV01060.1| methionine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 665

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 121/406 (29%), Gaps = 68/406 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I + S  P    H+G+    V+ D +A      GY+V  +   ++ G +I   A  
Sbjct: 9   MTTAIAYTSGKP----HIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQEKAEK 64

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                ++ + N   ++         +  +     D +        E++   I K    + 
Sbjct: 65  AGITPKEYVDNVAGEVK-------RIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKG 117

Query: 241 MMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              I +   + L     + F +E     G        +     + Y ++      K    
Sbjct: 118 --DIYKGSYEGLYCTPCESFWTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADKLINY 175

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMI 353
                +  Q + R   + ++   P             DL   +  +  G    FD  +++
Sbjct: 176 INEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFSWGIPVDFDPKHVV 225

Query: 354 YVM-------------GSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-- 395
           YV               +D      + K   A    + +   + + +   +  +  D   
Sbjct: 226 YVWLDALTNYITKIGYDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPL 285

Query: 396 ------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
                          KMSK  G+ I    + D  G D+ R+ +L            +  V
Sbjct: 286 PKQVFGHPWLLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLV 345

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFP 481
            E+   +    +     R  S+  +  D       +  ++D DL  
Sbjct: 346 IERYNSDLANILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKA 391


>gi|168186702|ref|ZP_02621337.1| glutamyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295298|gb|EDS77431.1| glutamyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 487

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 95/288 (32%), Gaps = 33/288 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A        +        D G  +      ++   +  
Sbjct: 11  APSPTGYMHVGNLRTALYTYLIA---KHEDGKFILRIEDTDQGRYVEGAVDVIYKTLEMT 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D     G   G Y++   K    +Y+ EL+   E  +        +        D 
Sbjct: 68  GLKHDEGPDIGGPVGPYVQSERKGTYIEYAKELVEKGE-AYYCFCDKERL--------DS 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           LK  +             + +       ++   + G  Y      P    T   D     
Sbjct: 119 LKENSDTFKYDGHCRSLSKEE-------VEENLKNGVPYVIRQKNPLDGVTTFEDEIYGT 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     +  
Sbjct: 172 ITVDNSEL---EDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGNEYLSSAPKYN 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +  A          + C  +         K+SKR GD  +   ++++
Sbjct: 224 RLYNAFGWDIP--TYVHCPPIM---KDAHNKLSKRNGDA-SFEDLLEK 265


>gi|218960598|ref|YP_001740373.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729255|emb|CAO80166.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 882

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 54/200 (27%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  L K           +            +     N TG +H+GH     + D + 
Sbjct: 6   TFEPKDLEKKWYQFWEENGYFKPRENTAQKPFTVLMPPPNVTGILHIGHVLNNTLQDVVV 65

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G        ++ AG     +                    E    G+  + +G+
Sbjct: 66  RYHRMKGEPTLWLPGVDHAGIATQNMVE-----------------KELAKQGITRQELGR 108

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   K   ++  +  EK               II D LK L    D              
Sbjct: 109 E---KMVEKIWQWKNEKG-------------NIIIDQLKLLGASCDWDRLRFTMDEMLSR 152

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            ++++   L  +G +Y+G  
Sbjct: 153 AVKEVFVALYEEGLIYKGKY 172


>gi|187479447|ref|YP_787472.1| glutamyl-tRNA synthetase [Bordetella avium 197N]
 gi|114153759|sp|Q2KUY9|SYE_BORA1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|115424034|emb|CAJ50587.1| glutamyl-tRNA synthetase [Bordetella avium 197N]
          Length = 467

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 97/289 (33%), Gaps = 49/289 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +V R     DA  Q    ++   
Sbjct: 12  APSPTGFLHLGGARTALFSWAFARHHKGVFVLRIEDTDVERST---DAAVQAILDSMDWL 68

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 +  ++    +      Y + +   LA   +    + PEE          V+AM 
Sbjct: 69  -----GMQPDEGPFYQMKRLDRYSEVLQSMLAAGTAYHCYSSPEE----------VEAMR 113

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R   +    ++D         R +P      I    +           P+   T   
Sbjct: 114 EAARA--RGDKPRYDGTW------RPEPGKTLPAIPEGRK----PVIRFKNPQDGVTAWD 161

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM +  + F +  +    D  + + DG+ TY   +       ++ G  ++I   G DH  
Sbjct: 162 DMVKGPVSFDNNELD---DLIIARPDGTPTY---NFCVVVDDWDMGMTHVIR--GDDHVN 213

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+     Q   +    + L  DG   K+SKR G    + 
Sbjct: 214 NTPRQINILKALGADVPQYGHV---PMILGPDGQ--KLSKRHGAVNVME 257


>gi|15605023|ref|NP_219807.1| valyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|237804647|ref|YP_002888801.1| valyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255317404|ref|ZP_05358650.1| valyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6226197|sp|O84304|SYV_CHLTR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3328717|gb|AAC67895.1| Valyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|231272947|emb|CAX09858.1| valyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436743|gb|ADH18913.1| valyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748431|gb|ADI50977.1| Valyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749311|gb|ADI51989.1| Valyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                 +  +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKQRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|330988299|gb|EGH86402.1| valyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009012|gb|EGH89068.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 941

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 35/211 (16%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            +         S   +    +G    + I     N TG +H+GH     + D L      
Sbjct: 2   AIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFRRM 59

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G     +   + AG     L      R  +A   +  +L                    
Sbjct: 60  QGRNTLWQPGTDHAGIATQMLV----ERRLEAQGVSRHEL-------------------- 95

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     EK+L  + ++  ++   I R  ++ L    D          G    +++ 
Sbjct: 96  --------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVKEA 146

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              L   G +Y G               D +
Sbjct: 147 FVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 177


>gi|303241037|ref|ZP_07327547.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591462|gb|EFL61200.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 643

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 107/334 (32%), Gaps = 56/334 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A      GY+V      ++ G +I         R  +A   
Sbjct: 15  PSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKI--------QRKAEAKGV 66

Query: 192 NDSDLPEGYYPGV-YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                 +    G+  L  + K   D++        EE    I K    Q    I + + +
Sbjct: 67  TPKQYVDEIVDGIKDLWKLMKITNDRFIRTTDKNHEEAVQKIFKKLYDQG--DIYKSEYE 124

Query: 251 ALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                  + F ++     G        ++    + Y +       +     + + +  Q 
Sbjct: 125 GWYCTPCESFWTKTQLVDGKCPDCGREVELTKEESYFFRLSKYQDRLIKFIEENPEFIQP 184

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM------- 356
           + R   + ++  RP             DL   +  +  G    FD  +++YV        
Sbjct: 185 VSRQNEMLNNFLRP----------GLEDLCVSRTTFNWGVPVTFDEKHVVYVWIDALSNY 234

Query: 357 -------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------------G 395
                    D   Y K   A    V ++  + + ++   + +                  
Sbjct: 235 ITALGFMSEDEQAYKKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQIYGHGWLLL 294

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ +    +V++ G D++R+ +L  
Sbjct: 295 EGGKMSKSKGNVVDPVVLVEKYGLDAIRYFLLRE 328


>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 463

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 120/377 (31%), Gaps = 37/377 (9%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DTL   + + GY+V    Y+++       +   +  R  +     D+ 
Sbjct: 35  IHIGNARPMIVFDTLRRYLEYKGYDV---NYVSN----FTDVDDKIIKRANE--EGVDAS 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +    Y     K +      + ++      E           +  M+K + +   A  + 
Sbjct: 86  VISERYIAEVKKDMAALNVREATTHPKATEE--------IPDMIEMVKTLIEKGYAYEVN 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             ++     F        +  ID+L        G      S   +K D     L      
Sbjct: 138 GTVYFRTRKFKDYG-KLSKKNIDDLRS------GNRDLLVSGVDEKEDPLDFVLWKPKKE 190

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                  P    DG   +            ++   ++I +            E   A  S
Sbjct: 191 GEPSWPSPW--GDGRPGWHLE----CSVMSKKYIGDVIDIHAGGEDLVFPHHENEIAQ-S 243

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           E           +   +      KMSK  G+F T+R + ++     +RF ML       L
Sbjct: 244 EAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYRSPL 303

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEF 491
           +F    V  ++ +N +  +  A  R +SI     +    +  ++D  +        +   
Sbjct: 304 NFSADLV--EASKNGLERILTAVDRLKSISGTEGEVDKAVADEMDAFVKKYEAAMDDDLN 361

Query: 492 DTSELQLIVHLAEYPRV 508
               + +I  L +Y  V
Sbjct: 362 TADAISVIFELVKYANV 378


>gi|295135568|ref|YP_003586244.1| valyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983583|gb|ADF54048.1| valyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 876

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 53/199 (26%), Gaps = 33/199 (16%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             +Y  + + +     I     N TG +H+GH     + D L       G+         
Sbjct: 22  DNKYFHSEVDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLKGFNAC------ 75

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                 +  +++   +    L N    + +             E   K+           
Sbjct: 76  -WVPGTDHASIATEAKVVAKLKNEG--ISKNDLSREEFLEHAWEWTHKHG---------- 122

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                          II D LK L    D   ++        + +  +  +L  +G VY 
Sbjct: 123 --------------GIILDQLKKLGASCDWDRTKFTMDDNMSASVIKVFVDLYEKGLVYR 168

Query: 289 GILPPPKSKTTQKCDMDRK 307
           G          +    D +
Sbjct: 169 GFRMVNWDPEAKTTLSDEE 187


>gi|294085220|ref|YP_003551980.1| Leucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664795|gb|ADE39896.1| Leucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 862

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + R+       +  +   N      K  +  +   P+G +H+GH R   +GD +A 
Sbjct: 9   IEKKWQRRWEDQGCFTADQPDSNKPNPKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVAR 68

Query: 153 LMAFSGYEV 161
                G+ V
Sbjct: 69  FRRAQGFNV 77


>gi|290960375|ref|YP_003491557.1| valyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260649901|emb|CBG73017.1| valyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 876

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 74/266 (27%), Gaps = 40/266 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +         I     N TG +H+GH     + D L   
Sbjct: 21  APADVEGALYERWVERGYFAADAKSDKPAYTIVIPPPNVTGSLHLGHAFQHTLMDALTRR 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE             ++   ++   + +Q L                        
Sbjct: 81  KRMQGYESL-------WLPGMDHAGIATQNKVEQQL------------------------ 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E+++  V  +  +   KI+   ++ L    D          G    +
Sbjct: 110 -AEEGKSRHDLGREEFVERVWQWKEEYGGKILGQ-MRRLGDGVDWDRERFTMDEGLSKAV 167

Query: 274 RDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           + I   L     +Y              + +  + +         S   G+  D  ++ +
Sbjct: 168 QTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEHQEDAGELVSIRYGEGDDSLVVAT 227

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
             + T    D A      +  + ++I
Sbjct: 228 TRAET-MLGDTAVAVHPDDERYRHLI 252


>gi|257463901|ref|ZP_05628287.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061430|ref|ZP_07925915.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687106|gb|EFS23941.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 887

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 59/200 (29%), Gaps = 33/200 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  +      I      +   L       +I     N TG +H+GH     + DTL 
Sbjct: 7   TYSPKEIESKWYPIWEEKKYFAGTLEEGKENYSIVIPPPNVTGILHMGHVLNNSIQDTLV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                                            YQ+    N   LP   + G+  ++  +
Sbjct: 67  R--------------------------------YQRMTGKNTLWLPGCDHAGIATQNKVE 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +      +   E++L    ++  +    II   L+ L    D          G   
Sbjct: 95  RKLKEEGLTKEDLGREEFLRRTWEWKEEHG-GIITTQLRKLGASLDWDRERFTMDEGLSH 153

Query: 272 PIRDIIDNLARQGYVYEGIL 291
            +R I  +L R G +Y+G  
Sbjct: 154 AVRKIFVDLYRDGLIYQGEY 173


>gi|111115428|ref|YP_710046.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123341311|sp|Q0SMQ8|SYC_BORAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110890702|gb|ABH01870.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 480

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 118/340 (34%), Gaps = 49/340 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D  +
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVV 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ ++ + +   + +  +           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVQEISEFFTEAFFKDCRKLNVVYPDKVLIASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTFSRVDIDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +  V   +++K   I V    L+  Y      KMSK  G+FIT++ + ++       
Sbjct: 248 INEIAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSRGNFITVKDLEEQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAYAR 460
           R++ L       L F     +  + ++EN +  + Y YA 
Sbjct: 303 RYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYAS 342


>gi|50913716|ref|YP_059688.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50902790|gb|AAT86505.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 666

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|139474323|ref|YP_001129039.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|73919759|sp|Q5XDK8|SYM_STRP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134272570|emb|CAM30836.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 665

 Score = 44.5 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 74  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 134 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 194 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 251

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 252 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 337


>gi|332367240|gb|EGJ44975.1| methionine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 665

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|319956024|ref|YP_004167287.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418428|gb|ADV45538.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 812

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +         +   +  +      K  I  +   P+G +H+GH R   +GD LA  
Sbjct: 4   DPKSIESKWQQKWEAERAFEPSEDQSLPKKYILSMFPYPSGRIHMGHVRNYAIGDALARY 63

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 64  WRKQGVNV 71


>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 484

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 107/360 (29%), Gaps = 57/360 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +V D LA      GY+VT                      Y +   + D  +
Sbjct: 38  HIGHARSTIVFDVLARYFRARGYDVT----------------------YVRNFTDIDDKI 75

Query: 197 PEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            E         K + +E  D +  ++      K     +       M  +   L      
Sbjct: 76  IERAKLLKKAPKELAREFIDAFYEDMGKLGVLKADVEPRATDYVEDMIEMTQTLMDRGYA 135

Query: 256 H----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +    D++ S D +        R++ D       +  G       +     D     +L+
Sbjct: 136 YTEGGDVYFSVDSYPGYGSLSGRNLED-------MRAGSRVAVDDRKRHPMDF----VLW 184

Query: 312 RSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-A 369
           +S   G+     P       +    + ++       R       + G          E  
Sbjct: 185 KSAKPGEPQWPSPWGPGRPGWHLECSVMS------NRHLGPTFDIHGGGRDLLFPHHENE 238

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            A ++     +          +  +    KMSK  G+F+T+R  + +   + +R  +L +
Sbjct: 239 RAQSMCANDGEFARYWVHNGFVTVESE--KMSKSLGNFLTIRDALKKYHPEVLRLFLLSK 296

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                LDF    V           +Q    R   + ++  D+    D +    + +   S
Sbjct: 297 HYRSPLDFSAKDVAN---------LQSGLVRIYRMLQRLNDLLGPGDGEKTSEDSLSGAS 347


>gi|268370297|ref|NP_001161206.1| valyl-tRNA synthetase, mitochondrial isoform 1 [Homo sapiens]
          Length = 1093

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 110 ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 168

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 169 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 204

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 205 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 256

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 257 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 303


>gi|253578541|ref|ZP_04855813.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850859|gb|EES78817.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 487

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 118/315 (37%), Gaps = 58/315 (18%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+     +     +
Sbjct: 13  APSPTGRMHVGNLRTALYAYLITKHEGGDFILRI-----EDTDQERYV-----EGAVDII 62

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L++   D  +G+ P V  +   + +  KY+ +L+   +  +    K   ++
Sbjct: 63  YRTLAKTGLLHDEGPDKDKGFGPYVQSERQAQGIYLKYAQQLVEQGD-AYYCFCKKEELE 121

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEGILPPPK 295
            M +++     ++  +  + +S+++  R    G+P  IR                   P 
Sbjct: 122 GMKRVVAGKEISIYDKRCLKLSKEEVQRRLDAGEPHVIR----------------FNMPT 165

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
             TT   D+    +   +  +    D  L+KSDG  TY  A++       +     + +V
Sbjct: 166 EGTTTFHDVIYGDITVNNEEL---EDLILIKSDGYPTYNFANV------IDDHLMEITHV 216

Query: 356 M-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + G+++     +   +  A         + +     L  D    K+SKR G   +   ++
Sbjct: 217 VRGNEYLSSAPKYNRIYEAFGWD-----IPVYVHCPLITDETHQKLSKRCGHS-SYEDLL 270

Query: 415 DE--VGSDSVRFMML 427
           D+  V    V ++ L
Sbjct: 271 DQGFVSEAIVNYVAL 285


>gi|238798775|ref|ZP_04642246.1| Valyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238717407|gb|EEQ09252.1| Valyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 960

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGREAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|237668511|ref|ZP_04528495.1| glutamate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237656859|gb|EEP54415.1| glutamate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 485

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 118/315 (37%), Gaps = 49/315 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         + +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHEDGDFILRI-----EDTDQERLVE------GAVDI 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  L +++     G   G Y++   K++  +Y+ +L+   E  +    KD    
Sbjct: 59  IYNTLKETGLTHDEGP-DVGGPVGPYIQSERKDIYLEYAKKLVEKGEAYYCFCSKDR--- 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             + +++++ +AL            + +      ++ I+    +G  Y      P + TT
Sbjct: 115 --LDMLKENAEALKRPF-------KYDKHCAHLSKEEIEENLAKGIPYVIRQNNPTTGTT 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+   ++   S    +  D  L+KSDG  TY   + A     +  G  ++  V G++
Sbjct: 166 TFVDVIYGKI---SVDNSELEDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGNE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--V 417
           +     +   +  A          + C  +         K+SKR GD  +   ++++  +
Sbjct: 218 YLSSSPKYNRLYEAFEWDVP--VYVHCPPIM---KDQHNKLSKRNGDA-SFGDLLEKGYL 271

Query: 418 GSDSVRFMMLWRKNS 432
               + ++ L   N 
Sbjct: 272 KEAVLNYIALLGWND 286


>gi|219520676|gb|AAI43537.1| VARS2 protein [Homo sapiens]
          Length = 1061

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|194388346|dbj|BAG65557.1| unnamed protein product [Homo sapiens]
          Length = 1093

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 110 ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 168

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 169 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 204

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 205 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 256

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 257 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 303


>gi|123281398|emb|CAM24842.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|123294764|emb|CAM25404.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|168983790|emb|CAQ10925.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|168985034|emb|CAQ09774.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|168985980|emb|CAQ06763.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|220675640|emb|CAX12733.1| valyl-tRNA synthetase like [Homo sapiens]
          Length = 326

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|268370293|ref|NP_065175.4| valyl-tRNA synthetase, mitochondrial isoform 2 precursor [Homo
           sapiens]
 gi|296452917|sp|Q5ST30|SYVM_HUMAN RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; AltName:
           Full=Valyl-tRNA synthetase-like; Flags: Precursor
 gi|55961887|emb|CAI18004.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|168985035|emb|CAQ09775.1| valyl-tRNA synthetase like [Homo sapiens]
          Length = 1063

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|119623753|gb|EAX03348.1| valyl-tRNA synthetase like, isoform CRA_a [Homo sapiens]
          Length = 1063

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|119623754|gb|EAX03349.1| valyl-tRNA synthetase like, isoform CRA_b [Homo sapiens]
          Length = 1075

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|56206535|emb|CAI18453.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|168983791|emb|CAQ10926.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|194382596|dbj|BAG64468.1| unnamed protein product [Homo sapiens]
          Length = 1063

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|55961733|emb|CAI17437.1| valyl-tRNA synthetase like [Homo sapiens]
 gi|168275568|dbj|BAG10504.1| valyl-tRNA synthetase 2-like protein [synthetic construct]
          Length = 1063

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|85567517|gb|AAI12055.1| Valyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|109731091|gb|AAI13606.1| Valyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|168985981|emb|CAQ06764.1| valyl-tRNA synthetase like [Homo sapiens]
          Length = 1063

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 80  ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 138

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 174

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 175 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 226

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 227 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 273


>gi|15620829|dbj|BAB67778.1| KIAA1885 protein [Homo sapiens]
          Length = 1098

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 115 ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 173

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 174 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 209

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 210 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 261

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 262 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 308


>gi|15897507|ref|NP_342112.1| leucyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174825|ref|ZP_06388794.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|14916942|sp|O33768|SYL2_SULSO RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|6015883|emb|CAB57710.1| isoleucyl-trna synthetase [Sulfolobus solfataricus P2]
 gi|13813756|gb|AAK40902.1| Leucyl-tRNA synthetase (leuS-2) [Sulfolobus solfataricus P2]
 gi|261602268|gb|ACX91871.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 944

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 58/197 (29%), Gaps = 29/197 (14%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       Y  N      K         P  P H+GH R  V GD LA      
Sbjct: 4   IAYKWQTRWEEDKIYESNPNPSKPKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMR 63

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           GY V     ++    G  I  +A         A+   D +L E +     +  +  ++  
Sbjct: 64  GYNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIP 110

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           + S  L              +      + I+  ++ + +  D             S +  
Sbjct: 111 RMSDPL--------------FMANYFKEDIKASMREIGLGIDWRREFTTIDPEFSSFVTW 156

Query: 276 IIDNLARQGYVYEGILP 292
               L  +GY+ +   P
Sbjct: 157 QFHKLQSKGYIVKDTHP 173


>gi|157828818|ref|YP_001495060.1| glutamyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933544|ref|YP_001650333.1| glutamyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|229470598|sp|B0BUL7|SYE2_RICRO RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|229470599|sp|A8GT27|SYE2_RICRS RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|157801299|gb|ABV76552.1| glutamyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908631|gb|ABY72927.1| glutamyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 513

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 96/286 (33%), Gaps = 46/286 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I   + +PTG +H+G  R A+     A              + N          L + 
Sbjct: 4   NVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLRIE 44

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQ 239
              ++          E  + G+    +       + S+  N  +E  L ++   K Y   
Sbjct: 45  DTDKERSTKEAV---EAIFSGLKWLGLDWNGEVIFQSKRNNLYKEAALKLLQNGKAYYCF 101

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              + I    +        FI   ++   DPS     I  + R        L  P+  + 
Sbjct: 102 TRQEEIERQRQQALENKQHFIFNSEWRDKDPSIYPTDIKPVIR--------LKTPREGSI 153

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G+D
Sbjct: 154 TIHDTLQGEVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GND 205

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A       +       + L       K+SKR G
Sbjct: 206 HLTNAARQLAIYQAFGYAVPSMTH-----IPLIHGADGAKLSKRHG 246


>gi|299141129|ref|ZP_07034266.1| glutamate--tRNA ligase [Prevotella oris C735]
 gi|298577089|gb|EFI48958.1| glutamate--tRNA ligase [Prevotella oris C735]
          Length = 505

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 103/294 (35%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTGP+H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MSERKVRVRF-APSPTGPLHIGGVRTALYNYLFAR--QHGGELVFR---IEDTDSHRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   +E+  KY  +LL+  +  ++   
Sbjct: 55  GAEEYIIESFRWLGIKFDEGVSF--GGSHGPYRQSERREIYKKYVGQLLDAGK-AYIAFD 111

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               ++A    I+      N Q+D         R   +  +  +D L   G  Y      
Sbjct: 112 TPEELEAKRNEIK------NFQYDAHTRLQ--MRNSLTLSKAEVDQLIADGTQYTVRFKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
                    DM R +++ +S ++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPGVEVHVNDMIRGEVIVKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A              L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYQAFGWTDTMPKFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|217967945|ref|YP_002353451.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217337044|gb|ACK42837.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 810

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 10/136 (7%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +             Y         K     +   P+G +H+GH R   +GD +A
Sbjct: 3   RYNPQEIEPKWQKKWNEDKLYHVTERSDKQKYYTLVMFPYPSGDLHMGHMRNYTIGDVVA 62

Query: 152 SLMAFSGYEVTREYYINDAG-AQINTLALSVFWRY----QQALYNNDSDLPEGYYPGVYL 206
                 GY V     +N  G       A +   +     ++  Y N + + E  +    +
Sbjct: 63  RYYTMKGYNV-----LNPMGWDAFGQPAENAAIKNKVHPKEWTYRNIARMKEQLFKMGVV 117

Query: 207 KHVGKELADKYSSELL 222
               +E+         
Sbjct: 118 YDWDREVTACAPDYYK 133


>gi|205372091|ref|ZP_03224908.1| glutamyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 484

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 97/287 (33%), Gaps = 34/287 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A      G  + R   I D   + N         +Y Q
Sbjct: 9   APSPTGHLHIGNARTALFNYLYAR--HHDGKFIIR---IEDTDKKRNIEGGEESQLQYLQ 63

Query: 188 ALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMMKII 245
            L  + D  + +    G Y +     +  +   +L+   +  +     ++   +   +  
Sbjct: 64  WLGIDWDESVDKDGGFGPYRQSERNHIYKELYEQLVREGKAYYCYCTEEELEAEREAQQA 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
              +   + +     +ED              + L  +G         P  K  +  DM 
Sbjct: 124 AGQMPRYSGKCRHLTTEDR-------------ERLEAEGRQPSIRFAVPAGKVYRFDDMV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           ++++ F S  +GD     ++K DG+ TY   + A     +     +++   G DH     
Sbjct: 171 KEEVAFESDGIGDF---VIVKKDGTPTY---NFAVAVDDHLMKISHILR--GDDHISNTP 222

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +   +  A   +      +      L  +    K+SKR    I    
Sbjct: 223 KQMMIYEAFGWQAPVFGHM-----TLIVNESRKKLSKRDESIIQFIE 264


>gi|91784973|ref|YP_560179.1| isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168144|sp|Q13UW2|SYI_BURXL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91688927|gb|ABE32127.1| Isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 86/253 (33%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   +  +K  ++  Q L    ++GD+ +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAQRVEKAGIEAWQSLDPRELLGDEANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D DF    R V     E D   + L  +L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHARPV-EDWLEIDRYAVALSANLQ--NDIL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 SH-YEKYEFHPVV 732


>gi|296104927|ref|YP_003615073.1| valyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059386|gb|ADF64124.1| valyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 951

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPRDIEQPLYEHWEQQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            ++++   L ++  +Y G          +    D +     S      +  PL  +DG+ 
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL--ADGAK 209

Query: 332 TYFAAD 337
           T    D
Sbjct: 210 TADGKD 215


>gi|291537807|emb|CBL10918.1| methionyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 665

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 121/406 (29%), Gaps = 68/406 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I + S  P    H+G+    V+ D +A      GY+V  +   ++ G +I   A  
Sbjct: 9   MTTAIAYTSGKP----HIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQEKAEK 64

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                ++ + N   ++         +  +     D +        E++   I K    + 
Sbjct: 65  AGITPKEYVDNVAGEVK-------RIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKG 117

Query: 241 MMKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              I +   + L     + F +E     G        +     + Y ++      K    
Sbjct: 118 --DIYKGSYEGLYCTPCESFWTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADKLINY 175

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMI 353
                +  Q + R   + ++   P             DL   +  +  G    FD  +++
Sbjct: 176 INEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFSWGIPVDFDPKHVV 225

Query: 354 YVM-------------GSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-- 395
           YV               +D      + K   A    + +   + + +   +  +  D   
Sbjct: 226 YVWLDALTNYITKIGYDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPL 285

Query: 396 ------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKV 442
                          KMSK  G+ I    + D  G D+ R+ +L            +  V
Sbjct: 286 PKQVFGHPWLLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLV 345

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFP 481
            E+   +    +     R  S+  +  D       +  ++D DL  
Sbjct: 346 IERYNSDLANILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKA 391


>gi|281425145|ref|ZP_06256058.1| glutamate--tRNA ligase [Prevotella oris F0302]
 gi|281400737|gb|EFB31568.1| glutamate--tRNA ligase [Prevotella oris F0302]
          Length = 505

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 103/294 (35%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTGP+H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MSERKVRVRF-APSPTGPLHIGGVRTALYNYLFAR--QHGGELVFR---IEDTDSHRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   +E+  KY  +LL+  +  ++   
Sbjct: 55  GAEEYIIESFRWLGIKFDEGVSF--GGSHGPYRQSERREIYKKYVGQLLDAGK-AYIAFD 111

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               ++A    I+      N Q+D         R   +  +  +D L   G  Y      
Sbjct: 112 TPEELEAKRNEIK------NFQYDAHTRLQ--MRNSLTLSKAEVDQLIADGTQYTVRFKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
                    DM R +++ +S ++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPGVEVHVNDMIRGEVIVKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A              L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYQAFGWTDTMPKFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|217970365|ref|YP_002355599.1| glutamyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507692|gb|ACK54703.1| glutamyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 472

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 78/486 (16%), Positives = 147/486 (30%), Gaps = 108/486 (22%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +V R      A  Q     +   
Sbjct: 17  APSPTGYLHIGGARTALFSWAFARRHGGTFILRIEDTDVARST---PAAVQAILDGMQWL 73

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L +++    +      Y + +G+ LA   +      PEE          +  + 
Sbjct: 74  -----GLEHDEGPFYQMQRMDRYKEVIGQMLAAGTAYHCYLSPEE----------LDRLR 118

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY------VYEGILPPPKS 296
           +  R+                   RG+           A +        V   +     +
Sbjct: 119 EAQRE-------------------RGEKPRYDGRWRPEAGKVLPQPPAGVQPVVRFRNPA 159

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +     D   K  +  +    DD    + ++DG+ TY   +       ++ G  ++I   
Sbjct: 160 EGVVSWDDLVKGRIEIANAEMDDF--IIARADGTPTY---NFCVVVDDWDMGITHVIR-- 212

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G DH     R   V  A+  +     V L   + +       K+SKR G    +++  + 
Sbjct: 213 GDDHVNNTPRQINVLQALGAE-----VPLYAHLSMILGDDGSKLSKRHGAVSVMQYDEEG 267

Query: 417 VGSDSVRFMML----WRKNSELLD-------FDFCKVK-EQSKENPVFY----VQYAYAR 460
              ++V   +        + E+ D       FD   +    ++ N         QY    
Sbjct: 268 YLPEAVINYLARLGWSHGDDEIFDRRQFVEWFDLDHITPSAAQFNTEKLNWLNAQY---- 323

Query: 461 CRSIFRQAKDIFPDLDFD--LFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQ- 516
                ++A D F   +    L  R V P+      + + L    +A     + +A     
Sbjct: 324 ----IKKADDAFLAAEVASRLARREVNPETGPSLEAVVALYKDRVANLNE-LADAAELFV 378

Query: 517 -----EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
                 P  +  +L D+A               LR   A        R  L  A+   + 
Sbjct: 379 ADVHPAPEVVGQHLTDVAKA---------ALASLRGRLAAAE---WNRAALSQAIKDTMA 426

Query: 572 S-GLNI 576
             GL +
Sbjct: 427 EHGLKM 432


>gi|154354342|gb|ABS76258.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5319]
 gi|154354344|gb|ABS76259.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5267]
          Length = 130

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSV 81
           KVE     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KVEILANKKIPLSKGRNSNKVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSTGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLGLTHPVLASWLQRLVE 115


>gi|56552860|ref|YP_163699.1| glutamyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|67461901|sp|Q5NL22|SYE2_ZYMMO RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|56544434|gb|AAV90588.1| glutamyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 481

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 93/282 (32%), Gaps = 40/282 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A     +G +        D          ++  
Sbjct: 11  VVTRFAPSPTGFLHIGGARTALFNWLFAR---HNGGQFQLRIEDTDRVRSTKEAIDAIID 67

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +    + D D+   +        V +EL  K       F   + L  ++    +A  +
Sbjct: 68  GMRWLGLDWDGDITYQFERAPRHTEVAEELL-KAGKAYKCFATAEELEAMRAE-QRAKKQ 125

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
             R D        D   SE                  A  G  Y   L   +   T   D
Sbjct: 126 PQRYD----GRWRDRDPSE------------------APAGAPYVVRLKAEQEGETTLHD 163

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + +  +  ++  +    D  LL+SDG+ TY    LA     ++ G +++I   G DH   
Sbjct: 164 LVQGDVTVKNAELD---DMILLRSDGTPTYM---LAVVVDDHDMGVNHVIR--GDDHLNN 215

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             R   +  A++    Q        + L       K+SKR G
Sbjct: 216 TFRQLGIIRAMNWDAPQ-----YAHIPLIHGADGAKLSKRHG 252


>gi|222529245|ref|YP_002573127.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456092|gb|ACM60354.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 817

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFKEIEKKWQQKWFSQN-----KYKVSEDSSKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|167844652|ref|ZP_02470160.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|71891825|ref|YP_277554.1| valine tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|90103529|sp|Q493Z9|SYV_BLOPB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71795931|gb|AAZ40682.1| valine tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 957

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 53/214 (24%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +      G  +  +         I     N TG +H+GH     + D L   
Sbjct: 11  NPKNIEEPIYKFWEYGDYFSPHGNTSQESYCIMMPPPNITGQLHLGHAFQQTIMDVLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                +   ++     +  +YNN       Y     +K++    
Sbjct: 71  QRMQGKNTL-------WQTGTDHAGIATQMLVEHKIYNNTGKTRHDYTRDELIKNIW--- 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                               K  S Q     I   +K L    D               +
Sbjct: 121 ------------------AWKSQSEQ----FITYQMKRLGNSVDWKRQRFTMDTEMSYAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +    L R+  +Y G          Q    D +
Sbjct: 159 TEAFIRLYRKNLIYRGKRLVNWDCKLQTAISDLE 192


>gi|312622508|ref|YP_004024121.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202975|gb|ADQ46302.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 817

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + +K  S       +Y  +      K  +  +   P+G +H+GH R   +GD
Sbjct: 4   NFKEIEKKWQQKWFSQN-----KYKVSEDSSKPKYYVLEMFPYPSGKLHMGHVRNYSIGD 58

Query: 149 TLASLMAFSGYEV 161
             A  M   GY V
Sbjct: 59  VFARFMRLKGYNV 71


>gi|209964503|ref|YP_002297418.1| glutamyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|238064684|sp|B6IST4|SYE2_RHOCS RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|209957969|gb|ACI98605.1| glutamyl-tRNA synthetase GltX [Rhodospirillum centenum SW]
          Length = 468

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 92/304 (30%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              +   + +PTG +H+G  R A+     A                   G  +  +  + 
Sbjct: 1   MTIVTRFAPSPTGFLHIGGARTALFNWLYAR---------------GHGGKFLLRIEDTD 45

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R  QA  +   D    +    +      +   K     +     +     + Y+    
Sbjct: 46  RARSTQAAVDAILD-GLDWLGLEWDGDPISQFERKDRHAEVAHEMLRRGMAYRCYASPEE 104

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++ ++++ +   +         D    +     + +  L                +  + 
Sbjct: 105 LEAMKEEQRRQGLPMRYDGRWRDRDPSEAPAGVNPVIRLKA-------------PQEGET 151

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
              D  Q   R      D D  LL+SDG+ TY    LA     Y+ G  ++  V G DH 
Sbjct: 152 VVRDHVQGEVRVQNAQLD-DMILLRSDGTPTYL---LAVVVDDYDMGVTHV--VRGDDHL 205

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   + AA+     +        V L       K+SKR G           +G D+
Sbjct: 206 TNTFRQLQIYAAMGWTPPE-----YAHVPLIHGPDGAKLSKRHG----------ALGVDA 250

Query: 422 VRFM 425
            R M
Sbjct: 251 YRDM 254


>gi|150020359|ref|YP_001305713.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166229776|sp|A6LK77|SYI_THEM4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|149792880|gb|ABR30328.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 908

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 48/247 (19%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D    L+    + EG+  P   K + +   D   +   S    +     +++S G     
Sbjct: 487 DAWFELSEDELIPEGVKCPKCGKNSFEKTYDTLDVWIDSGCSFE----AVIRSKG----- 537

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                         F   +Y+ G D   G+ +    ++ A +      +V+    +   +
Sbjct: 538 ------------EKFPVDLYLEGDDQHRGWFQSSIFMSVAHTNIAPYKSVVTHGFI---K 582

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ I  + +VD+ G+D +R  +        +DF F  ++          
Sbjct: 583 DEHGRKMSKSLGNVIDPKEIVDKYGADILRLWV------SSIDF-FDNIRVGKN-----I 630

Query: 454 VQY---AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +Q     Y + R+  R       D + ++    ++P E      +  L         VI 
Sbjct: 631 IQQQVETYKKLRNTLRYLLGNLNDFEENM----IVPFEKLLPLDKWAL----GRLQEVIS 682

Query: 511 NATIAQE 517
             T   E
Sbjct: 683 QVTEHFE 689


>gi|20094860|ref|NP_614707.1| valyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74559149|sp|Q8TVG5|SYV_METKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19888087|gb|AAM02637.1| Valyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 914

 Score = 44.5 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 43/219 (19%)

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           V A V         +L   +    DG   KMSK  G+ +    V++E G+D++R+  +  
Sbjct: 525 VRALVHADTEPFKEILINGMVFGEDG--YKMSKSRGNVVEPTEVIEEYGADALRYWAVSS 582

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                   D   + +  K    F       +  ++ R AKD   D        +V   E 
Sbjct: 583 GAPGS---DVQYMTKTIKRGYRF-----AKKIWNVCRLAKDHIDDA------PSVEEVEG 628

Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549
           +   ++  +   L+++ R+++  T   E    + Y               +      + +
Sbjct: 629 DLTPADRWI---LSKFHRLVDEVTEHLE----SGY---------RFNDAIKAIEEFAWEE 672

Query: 550 ANNRKLTMMRLQLV----------HAVASIINSGLN-II 577
             +  L M +L+L            A  +++   L+ ++
Sbjct: 673 LADDYLEMAKLRLYRPEELGEGSREAARAVLRHVLDGLL 711



 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 66/249 (26%), Gaps = 32/249 (12%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +        +   +Y            I+     PTG +H+GH       D +A  
Sbjct: 11  DPKEIEPKWRERWLEERKYRFEGGEDRPAFVIDTPPPYPTGELHMGHVLNWTYMDVVARY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+                    VF+      +   +++      G+  +      
Sbjct: 71  KRMCGYD--------------------VFFPQGWDCHGLPTEVKVEEIHGITKR------ 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--DIFISEDDFHRGDPS 271
            D    E     EE  L  ++    Q +      D     I +  +       +   DP 
Sbjct: 105 -DAPRREFRKLCEELTLENIRKMREQLIQLGCSIDWWTDCIDYENEELKELGSYVTMDPD 163

Query: 272 PIRDI---IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            IR        L  +GY Y    P       +      +          + ++ P+   D
Sbjct: 164 YIRRSQYGFLELLEKGYAYREEHPVNWCPRCETAIAFAEVEYVTRETYLNYIEFPVADGD 223

Query: 329 GSYTYFAAD 337
           GS T     
Sbjct: 224 GSVTIATTR 232


>gi|294101689|ref|YP_003553547.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616669|gb|ADE56823.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 828

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +LS     + +           +    K     +E     P+G +H+GH R   +GD +A
Sbjct: 5   FLSIEQKWQKVWE--EENTFKVKADPSKKKFYCLEMF-PYPSGALHMGHLRNYSIGDMMA 61

Query: 152 SLMAFSGYEV 161
             +  +GY V
Sbjct: 62  RFLWMNGYNV 71


>gi|53726229|ref|YP_103806.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67641265|ref|ZP_00440047.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121600067|ref|YP_993955.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124384509|ref|YP_001027020.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126448402|ref|YP_001081643.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452873|ref|YP_001065252.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|166998899|ref|ZP_02264751.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|242317301|ref|ZP_04816317.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254175326|ref|ZP_04881986.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202509|ref|ZP_04908872.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207844|ref|ZP_04914194.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356261|ref|ZP_04972537.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823943|sp|Q62HL4|SYI1_BURMA RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52429652|gb|AAU50245.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228877|gb|ABM51395.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124292529|gb|ABN01798.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226515|gb|ABN90055.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126241272|gb|ABO04365.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746756|gb|EDK53833.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751738|gb|EDK58805.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025258|gb|EDK83412.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160696370|gb|EDP86340.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238522164|gb|EEP85610.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242140540|gb|EES26942.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243064980|gb|EES47166.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|309781488|ref|ZP_07676224.1| isoleucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308919901|gb|EFP65562.1| isoleucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 959

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTYFAADLAYFK 342
           L    ++  ++  ++  Q L    ++GD+ D      D        G+  +     ++  
Sbjct: 513 LLEQVAQRIEQSGIEAWQTLDPRELLGDEADMYEKNRDTLDVWFDSGTTHWHVIRGSHAA 572

Query: 343 CKYERGFD----NM--IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             Y+   D     +  +Y+ GSD   G+       A+ +  K     +L         DG
Sbjct: 573 DLYDASADLPDGRLADLYLEGSDQHRGWFHSSLLTASMLYGKPPYKGLLTHGF---TVDG 629

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ I  + + +++G++ +R  +     S  L      +K   +        
Sbjct: 630 EGRKMSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISDEILKRVVEG------- 682

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             Y R R+  R       D D          Q  E D   + L
Sbjct: 683 --YRRIRNTLRFLLANLTDYDHAKHALPT-EQWLEIDRYAVAL 722


>gi|294010880|ref|YP_003544340.1| glutamyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674210|dbj|BAI95728.1| glutamyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 478

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 100/299 (33%), Gaps = 43/299 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 8   KQVVTRFAPSPTGFLHIGGARTALFNWLFAR---HHGGKFLLRIEDTDRARSTEEAVAAI 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSVQA 240
           F   +      D      +        V  +L    ++      PEE  L  +++    A
Sbjct: 65  FDGLEWLGLGGDEPAVFQFERTPRHAEVANQLLAGGHAYRCYATPEE--LAELREQQRAA 122

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              +  D         D   SE     G P  IR                L  P+   T 
Sbjct: 123 KQPMRYD-----GRWRDRDPSEAP--EGAPFVIR----------------LKAPREGETV 159

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + +++ ++  +    D  LL+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 160 IEDAVQGRVVVQNAELD---DMILLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 211

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                R   +  A+  ++      +   + L       K+SKR G  + +    DE+G 
Sbjct: 212 LNNAFRQLGIIRAMGWEEP-----VYAHIPLIHGSDGAKLSKRHG-ALGVDAYRDEMGM 264


>gi|295689026|ref|YP_003592719.1| valyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430929|gb|ADG10101.1| valyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 907

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 57/216 (26%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L +   +   +            I     N TG +H+GH     + D L 
Sbjct: 5   TFDPKSVEPRLYAAWEASGAFKPVEDPNAEPFVIVIPPPNVTGSLHIGHALNNTLQDVLT 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V +
Sbjct: 65  RFHRMRGKAALWLPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA   +    +   + ++  V ++  ++    I + L+ L    D          G  +
Sbjct: 94  QLAAAGNIGRRDMGRDAFVAKVWEWKAESG-GAITNQLRRLGASCDWSRERFTLDEGLSA 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L +Q  +Y            Q    D +
Sbjct: 153 AVRKVFVQLYKQNLLYRDKRLVNWDPQFQTAISDLE 188



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 13/94 (13%)

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
            ADLA  Y       GFD +I+         V R+  +      +     V +  LV   
Sbjct: 493 TADLAKFYPTSTLVTGFD-IIFFW-------VARMMMMGIHFMGEAPFKQVFINALV--- 541

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           RD    KMSK  G+ +    ++DE+G D+VRF +
Sbjct: 542 RDEKGAKMSKSKGNVMDPLILIDELGCDAVRFTL 575


>gi|219558447|ref|ZP_03537523.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T17]
          Length = 757

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 460 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 509

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 510 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 567

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 568 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 611

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 612 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 663

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 664 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 689



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPAAMESAIYQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  + +  + 
Sbjct: 77  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEQQLAVD- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDLGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   Q    D +
Sbjct: 164 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLE 197


>gi|212702192|ref|ZP_03310320.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
 gi|212674397|gb|EEB34880.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
          Length = 837

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + +           +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYSPQDIEQKWQERWQQQDAFACDHHSDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RCKRMQGFNV 74


>gi|167737503|ref|ZP_02410277.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|160914286|ref|ZP_02076507.1| hypothetical protein EUBDOL_00296 [Eubacterium dolichum DSM 3991]
 gi|158433913|gb|EDP12202.1| hypothetical protein EUBDOL_00296 [Eubacterium dolichum DSM 3991]
          Length = 908

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 62/320 (19%), Positives = 98/320 (30%), Gaps = 58/320 (18%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK  ++LL+   +  W+P      +  M+   R D      +A  +   IF +ED+    
Sbjct: 416 DKIRTQLLDEIDKVDWIPKWGQQRMHNMIAD-RGDWCISRQRAWGVPIPIFYAEDETPIM 474

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D      +   +   G            + EG   P         + D   + F S   G
Sbjct: 475 DEKVFEHVAKLIGEYGSNIWFEKEAKDLLPEGYTHPKSPNGIFTKETDTMDVWFDS---G 531

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 +LK     +Y A                 +Y  GSD   G+      V  AV  
Sbjct: 532 SSHTGAMLKK--GLSYPAD----------------LYFEGSDQYRGWFNSSLIVGTAVHG 573

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     VL    V    DG  +KMSK   + +    +  + G+D +R             
Sbjct: 574 QAPYKQVLSHGFVM---DGKGVKMSKSQWNAVAPGEITKKFGADILRLWAASVDYQADCS 630

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +K+ S+          Y + R+ FR       + DF       I    E D    
Sbjct: 631 MSDEIMKQVSEN---------YRKVRNTFRFLLANINEEDFTKEDLVDIATLPELDKY-- 679

Query: 497 QLIVHLAEYPRVIENATIAQ 516
                L +   V + A  A 
Sbjct: 680 ----MLLQLNEVNDKAKKAY 695


>gi|146281350|ref|YP_001171503.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166229760|sp|A4VI60|SYI_PSEU5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145569555|gb|ABP78661.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 943

 Score = 44.5 bits (104), Expect = 0.047,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 87/248 (35%), Gaps = 30/248 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------G 329
              G ++   +   + +  Q+ +    +   +   + ++GD+  +    +D        G
Sbjct: 483 KESGELHPRTVELME-QVAQRVEQGGIEAWSKLDAAELLGDEAAQYEKITDTLDVWFDSG 541

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  +           +E+G    +Y+ GSD   G+        AA+ +  A    LL   
Sbjct: 542 TTHWHVMR-GSHPMGHEQGPRADLYLEGSDQHRGWFHSSLLTGAAI-DGHAPYKGLLTHG 599

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             +  +G   KMSK  G+ I  + + D +G+D +R  +         D+       +   
Sbjct: 600 FTVDENGR--KMSKSLGNVIAPQEITDSMGADILRLWV------SATDYSGEMAVSKQ-- 649

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
                +Q +    R I   A+ +  +LD     +++ P +         +   L    R 
Sbjct: 650 ----ILQRSADAYRRIRNTARFLLSNLDGFDPAQHMAPNDQLIALDRWAIDRALL-LQRE 704

Query: 509 IENATIAQ 516
           IE A    
Sbjct: 705 IEEAYTTY 712


>gi|269103494|ref|ZP_06156191.1| valyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163392|gb|EEZ41888.1| valyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 953

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDAGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +  +Y G               D +
Sbjct: 152 AVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|296197634|ref|XP_002746360.1| PREDICTED: valyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 1061

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 54/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           +     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYPWWVREGFFKPEYQAQLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 168 RWHRMRG---------------------------DQVLWVPGSDHAGIATQAVVEK---- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +         +E +L  V  +  +A    I + L+AL    D          G   
Sbjct: 197 QLWKERGVRRHELSQEDFLREVWQWK-EAKGGEIYEQLQALGASLDWDRECFTMDAGSSV 255

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L + G +Y  
Sbjct: 256 AVTEAFVRLHKAGLLYRN 273


>gi|237734034|ref|ZP_04564515.1| transferRNA-Gln synthetase [Mollicutes bacterium D7]
 gi|229382860|gb|EEO32951.1| transferRNA-Gln synthetase [Coprobacillus sp. D7]
          Length = 489

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 96/291 (32%), Gaps = 45/291 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L      ++ R        +Q+  LA 
Sbjct: 21  APSPTGHLHIGGARTALFNYLFAKHHGGDFIFRLEDT---DIER-NIEGGEASQLENLAW 76

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  L       P       Y +    ++  KY+ ELL            D  + 
Sbjct: 77  LGIIPDESPLNPKPEYAP-------YRQMERLDIYRKYTQELL------------DRGLA 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                  ++L A + +         ++R       + +      G  Y   L  P +KT 
Sbjct: 118 YKCFCTPEELDAEHERQVEAGVAPMYNRKCRDLTAEEVAAKEAAGIPYTIRLRVPANKTY 177

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM R  + F S  +GD     ++K++G  TY   + A     +     ++    G +
Sbjct: 178 EFDDMIRGHVSFESNDIGDW---VIVKANGIPTY---NYAVVIDDHTMEITHV--FRGEE 229

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           H     +   V   +  K      +      L  +    K+SKR    +  
Sbjct: 230 HLSNTPKQMMVFEMLGWKAPTYGHM-----TLIVNEQRKKLSKRDESIMQF 275


>gi|167718453|ref|ZP_02401689.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|167756048|ref|ZP_02428175.1| hypothetical protein CLORAM_01568 [Clostridium ramosum DSM 1402]
 gi|167704040|gb|EDS18619.1| hypothetical protein CLORAM_01568 [Clostridium ramosum DSM 1402]
          Length = 477

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 96/291 (32%), Gaps = 45/291 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L      ++ R        +Q+  LA 
Sbjct: 9   APSPTGHLHIGGARTALFNYLFAKHHGGDFIFRLEDT---DIER-NIEGGEASQLENLAW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +  L       P       Y +    ++  KY+ ELL            D  + 
Sbjct: 65  LGIIPDESPLNPKPEYAP-------YRQMERLDIYRKYTQELL------------DRGLA 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                  ++L A + +         ++R       + +      G  Y   L  P +KT 
Sbjct: 106 YKCFCTPEELDAEHERQVEAGVAPMYNRKCRDLTAEEVAAKEAAGIPYTIRLRVPANKTY 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM R  + F S  +GD     ++K++G  TY   + A     +     ++    G +
Sbjct: 166 EFDDMIRGHVSFESNDIGDW---VIVKANGIPTY---NYAVVIDDHTMEITHV--FRGEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           H     +   V   +  K      +      L  +    K+SKR    +  
Sbjct: 218 HLSNTPKQMMVFEMLGWKAPTYGHM-----TLIVNEQRKKLSKRDESIMQF 263


>gi|108805643|ref|YP_645580.1| glutamyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123367895|sp|Q1AS60|SYE2_RUBXD RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|108766886|gb|ABG05768.1| glutamyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 496

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 90/285 (31%), Gaps = 43/285 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R          +  L  S+ 
Sbjct: 12  APSPTGRLHVGGVRTALFNWLFARKHGGVFILRIEDTDLERS-----TEESVEQLKRSLR 66

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D   P       Y +    EL  + +  LL      +     D++    +
Sbjct: 67  WIGLDWDEGPDVGGP----HAPYRQTERLELYRRAARRLLESGAAYY-----DFATPEEL 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA--RQGYVYEGILPPPKSKTTQ 300
              R   +A              + G P    D  + L   R G  +      P+   T 
Sbjct: 118 TRFRQRARAEGRPP--------IYTGGPYREMDPEEALRRVRMGEPHTVRFKTPREGRTV 169

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ R  + F +  + D     LLKS G+ TY   + A      E    ++I   G DH
Sbjct: 170 FEDIIRGPVGFENATIEDF---VLLKSTGTPTY---NFAAAVDDAEMQITHVIR--GDDH 221

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                R   +  A+  +           V         K+SKR G
Sbjct: 222 ISNTPRQIMIHRALGHELPAFAH-----VPQVLGPDRKKLSKRHG 261


>gi|268592786|ref|ZP_06127007.1| valine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311568|gb|EFE52021.1| valine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 964

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L +       +  N         +     N TG +H+GH     + DT+ 
Sbjct: 17  TYNPAEIEQSLYAHWEKSGYFKPNGDTTQDSFCVVIPPPNVTGSLHMGHAFQQTIMDTMI 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 77  RYQRMQGKNTLWQTGTDHAGIATQMV-------------------------------VER 105

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I   ++ L    D          G   
Sbjct: 106 KIAAEEGKNRHDYGRDAFIDKIWEWKAESG-GTISQQMRRLGDSVDWDRERFTMDEGLSK 164

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G               D +
Sbjct: 165 AVKEAFVRLYKENLIYRGKRLVNWDPKLHTAISDLE 200


>gi|145250135|ref|XP_001396581.1| leucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134082094|emb|CAK42211.1| unnamed protein product [Aspergillus niger]
          Length = 989

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +  +  +  +    +   +   K     +      P+G +H+GH R   + D LA 
Sbjct: 58  LDKKWQERWQTDSLKKPSKTSADGDAKPKSYILSMF-PYPSGTLHMGHLRVYTISDVLAR 116

Query: 153 LMAFSGYEV 161
                G+EV
Sbjct: 117 FYRMRGHEV 125


>gi|53718547|ref|YP_107533.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134281015|ref|ZP_01767724.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167814621|ref|ZP_02446301.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167823091|ref|ZP_02454562.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226194373|ref|ZP_03789971.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237811169|ref|YP_002895620.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|81824819|sp|Q63WI3|SYI1_BURPS RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52208961|emb|CAH34900.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134247321|gb|EBA47406.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|225933458|gb|EEH29447.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505211|gb|ACQ97529.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|306836711|ref|ZP_07469674.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567389|gb|EFM42991.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 1091

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 44/351 (12%), Positives = 104/351 (29%), Gaps = 50/351 (14%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    V    +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 205 PQAVEKDLYEGWVDRGYFTPDANSEAEGFSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 264

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++   + +  L   +                     
Sbjct: 265 RMQGYSTL-------WLPGADHAGIATQTKVEAKLKETE--------------------- 296

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                +  ++  E+++  V ++  Q     I++ ++A+    D          G    ++
Sbjct: 297 ---GKKRWDYEREEFIDKVWEWKEQYG-GTIQNQMRAIGDSVDWTRERFTLDEGLSRAVQ 352

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPLL 325
            I  NL   G +Y        S   +           D++ + +  R   + DD    ++
Sbjct: 353 TIFKNLYDAGMIYRANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHLIV 412

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVL 384
            +    T    D+A      +  + +++          +  R +     +++    +   
Sbjct: 413 ATTRVET-MLGDVAIAVHPDDERYAHLV-----GQELDHPFRDDLKLKIIADDYVDMEFG 466

Query: 385 LCEL-VRLYRDGMPIKMSKRAG-DFITLRHVVDEVGSDSVRFMMLWRKNSE 433
              + +    D     M  R   D  T+      +     RF  + R+ + 
Sbjct: 467 TGAVKITPAHDPNDYAMGTRHDLDMPTVMDTTGHIAHTGTRFDGMTREEAR 517


>gi|293391734|ref|ZP_06636068.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952268|gb|EFE02387.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 940

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 86/242 (35%), Gaps = 23/242 (9%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLAYFKC 343
            + E      K+      D+D K+LL         V   L +  D   TY +  +   + 
Sbjct: 492 LLEEVARRVEKAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDSGSTYSS--VVANRP 549

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           ++E    +M Y+ GSD   G+      ++ A   K     VL         DG   KMSK
Sbjct: 550 EFEGKAADM-YLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGF---TVDGQGRKMSK 605

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +T + V+D+ G D +R  +     +  +      +K             A    R
Sbjct: 606 SIGNVVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKR------------AADSYR 653

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-AEYPRVIENATIAQEPYKL 521
            I   A+ +  +L+     R+ +  E         +   L A+    I++A    + + +
Sbjct: 654 RIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALEAQ--NEIKDAYDNYQFHAV 711

Query: 522 AF 523
             
Sbjct: 712 VQ 713


>gi|326317967|ref|YP_004235639.1| valyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323374803|gb|ADX47072.1| valyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 961

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 55/202 (27%), Gaps = 45/202 (22%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG--AQINT 176
           +G    I+    N TG +H+GH     + D+LA      G+        + AG   QI  
Sbjct: 53  RGENFAIQLPPPNVTGTLHMGHAFNQTIMDSLARYHRMRGHNTLWVPGTDHAGIATQI-- 110

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               V  R  Q                            +      +   E +   V ++
Sbjct: 111 ----VVERQLQ----------------------------EQGVSRHDLGREAFTRKVWEW 138

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG------- 289
             ++    I   ++ L    D               + D    L  QG +Y G       
Sbjct: 139 KEKSG-NTITTQMRRLGDSVDWSREYFTMDDKLSKVVTDTFVRLYEQGLIYRGKRLVNWD 197

Query: 290 -ILPPPKSKTTQKCDMDRKQLL 310
            +L    S    + +     L 
Sbjct: 198 PVLQSAVSDLEVESEEKDGSLW 219


>gi|262371890|ref|ZP_06065169.1| valyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311915|gb|EEY93000.1| valyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 965

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K    I      +     G+G    I     N TG +H+GH     + 
Sbjct: 9   NIATTYDPTEIEKKWYQIWEQNGYF--KPSGQGESFCIMIPPPNVTGSLHMGHGFNNAIM 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G                           +  L+   +D        V  +
Sbjct: 67  DALTRYNRMMG---------------------------KNTLWQPGTDHAGIATQMVVER 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +  +++     +   EK++  V ++  Q+   I R  ++ L    D          
Sbjct: 100 QLGLQGINRH-----DLGREKFIDKVWEWKEQSGGTITRQ-IRRLGSSVDWSRERFTMDE 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 154 GLSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|257452268|ref|ZP_05617567.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257465932|ref|ZP_05630243.1| glutamyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917088|ref|ZP_07913328.1| glutamyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690963|gb|EFS27798.1| glutamyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 499

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 93/283 (32%), Gaps = 40/283 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTG  HVG    A+     A+      ++     +  R       G++   +  ++
Sbjct: 9   IAPSPTGDPHVGTAYIALFNLAFANHNGGDFILRIEDTDQNR----YTEGSE-QMIFDAL 63

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W         D     G   G Y +    +L  KY+ EL+      +        +  +
Sbjct: 64  HWLGLDYAEGPDV----GGDYGSYRQSERFDLYVKYAKELVEKGG-AYYCFCTSDRLDNL 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  +   KA                   S  ++ I+     G  Y   L  P    T  
Sbjct: 119 RERQKAMGKAPGYDGHC-----------RSLTKEEIEAKLAAGEPYVIRLKMPYEGETVI 167

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  ++F +  +    D+ LLK+DG  TY    LA     +  G  ++I     +  
Sbjct: 168 HDRLRGDIVFENNKID---DQVLLKADGFPTYH---LANVVDDHLMGITHVIR--AEEWI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
               +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 220 PSTPKHIQLYKAFGWEAPEFIHM-----PLLRNSDRTKISKRK 257


>gi|237749157|ref|ZP_04579637.1| valyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380519|gb|EEO30610.1| valyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 933

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 69/231 (29%), Gaps = 51/231 (22%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             PS + K    I      +  +L        I+    N TG +H+GH     + D L  
Sbjct: 7   FEPSEIEKHWREIWEQSGYFRASLDENKPSFAIQLPPPNVTGTLHMGHAFNQTIMDGLVR 66

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                GY        + AG   QI                             V  + + 
Sbjct: 67  YHRMRGYNTAWIPGTDHAGIATQI-----------------------------VVERQLD 97

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +   ++     +   EK+L  V ++  ++    I   ++ +    D    E ++   D 
Sbjct: 98  AQKISRH-----DLGREKFLEKVWEWKEKSG-STITGQMRHMGTSPD---WEREYFTMDE 148

Query: 271 SP---IRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           +    + D+   L  +G +Y G        +L    S      + +   + 
Sbjct: 149 TRSKVVADVFVRLYEEGLIYRGKRLVNWDPVLGTAVSDLEVVSEEENGSMW 199


>gi|254457829|ref|ZP_05071256.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085222|gb|EDZ62507.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 652

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 76/481 (15%), Positives = 144/481 (29%), Gaps = 79/481 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
             G  H+GH     + DT+        YE  +  Y         T       + +++   
Sbjct: 12  VNGEAHIGHAYTTFIADTMTR------YEKLKGNY-----TYFLTGTDEHGQKIEESAQK 60

Query: 192 NDSDLPEGYYP-GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           +     E         K +  E    Y   +     +  L + K + V      I  D  
Sbjct: 61  HGKPTQEFADEISATFKDLWDEFEIGYDKFIRTTDADHKLGVQKAFEVMYAKGDIYKDFY 120

Query: 251 A--LNIQHDIFISEDDFHRGDP----SPIRDIIDNLARQGYV--YEGILPPPKSKTTQKC 302
                +  + F  E     G+          ++   +    +  YE  L           
Sbjct: 121 EGHYCVSCETFFPETQLIDGEFCPDCGRTTSVVKEESYFFKLSKYEDALLRHYEDNPDFI 180

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKS-----------------------DGSYTYFAADLA 339
               +    ++ + G   D  + ++                       D    Y  A L 
Sbjct: 181 LPRSRANEVKNFVKGGLRDLSVTRTSFTWGVKLPESMNDDKHVMYVWLDALMNYITA-LG 239

Query: 340 YFKCKYERGF-DNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDG 395
           Y K      F    + ++G D    + R  A+   A  +S         +       RDG
Sbjct: 240 YGKDDANMDFWPASMQLVGKD----ILRFHAIYWPAFLMSLDLPLPKH-IGAHGWWTRDG 294

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ I+ + V D  G +++R+ ML R+     D DF +     + N      
Sbjct: 295 E--KMSKSKGNVISPKEVSDAYGVENLRYFML-REVPFGQDGDFSQRAFIDRINSELSND 351

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
                 R I           DF++   +V    ++   +  + + +L  +          
Sbjct: 352 LGNLLNRII----GMSEKYSDFEIDSVDVEKYHAKELEAMNEALGNLDGF-------MQN 400

Query: 516 QEPYKLAFYLYDLASVF---HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
            + ++   YL +L  +F   +   +     P ++  +    +     L  V  VA+I+  
Sbjct: 401 MQTHR---YLEELWKLFAIGNK--AIEEHAPWVKIKEGKKDEA----LATVALVANILAK 451

Query: 573 G 573
            
Sbjct: 452 A 452


>gi|167901637|ref|ZP_02488842.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217419606|ref|ZP_03451112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396910|gb|EEC36926.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|162146414|ref|YP_001600873.1| isoleucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161784989|emb|CAP54532.1| putative isoleucyl-tRNA synthetase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 968

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 87/273 (31%), Gaps = 42/273 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAADLAY 340
           V + I+   +++                    DD ++     D     GS        A+
Sbjct: 518 VMQRIVDAFRTEGADVWYSAPAARFLGEDRNPDDYEQVFDIVDVWFESGSTH------AF 571

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
              +    F   +Y+ GSD   G+ +    +  +V  +       L        D    K
Sbjct: 572 VLGRDGLPFPADLYLEGSDQHRGWFQSS--LLESVGTRGVAPYRALVTNG-FVLDEQGRK 628

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V D +G+D +R  ++    ++ L      +K+Q +          Y 
Sbjct: 629 MSKSLGNVVAPQDVNDSLGADILRLWVMNSDTNDDLRIGGEILKQQGEL---------YR 679

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-- 517
           R R+  R    +   LD        +P E   +  +  L   L E    + +A  + E  
Sbjct: 680 RLRNTLRW---LLGGLD-GFTEAERVPYEQMPELEQWVLHR-LTELGGQVAHAVRSHEWV 734

Query: 518 -----PYKLAFYLYDLASVFHGHWSHGRENPRL 545
                 +         AS     +   R++   
Sbjct: 735 GLYGAIHGFC------ASDLSAFYFDVRKDAIY 761


>gi|126738687|ref|ZP_01754392.1| leucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126720486|gb|EBA17192.1| leucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 855

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +GI   +   GK     +E     P+G +H+GH R   +GD +A   A +G
Sbjct: 11  AKWQEAWDKAGIFQAKRTGGKPKYYVLEMF-PYPSGKLHMGHVRNYTMGDVIARYKASTG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|83589432|ref|YP_429441.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725764|sp|Q2RKZ1|SYL_MOOTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83572346|gb|ABC18898.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 829

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   + P + R+       S +        K     +E     P+G +H+GH R   +GD
Sbjct: 6   NFKEIEPKWQRRW----EASDLYRVTEDPDKPKFYCLEMF-PYPSGNLHMGHVRNYSIGD 60

Query: 149 TLASLMAFSGYEV 161
            +A +    GY V
Sbjct: 61  VVARVKRMRGYNV 73


>gi|58580454|ref|YP_199470.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188578611|ref|YP_001915540.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|81311975|sp|Q5H4N5|SYV_XANOR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|254783561|sp|B2SPF0|SYV_XANOP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58425048|gb|AAW74085.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188523063|gb|ACD61008.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 980

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 56/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  G+   V +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPSDTGEPYTVLL--PPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++   +    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWKAASG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|167909886|ref|ZP_02496977.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196170|ref|ZP_04902594.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169652913|gb|EDS85606.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|126442280|ref|YP_001058018.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126221773|gb|ABN85279.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|125974586|ref|YP_001038496.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004052|ref|ZP_05429037.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714811|gb|ABN53303.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991975|gb|EEU02072.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941704|gb|ADU75738.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 654

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 113/365 (30%), Gaps = 118/365 (32%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A      GY+V                              
Sbjct: 15  PSDKLHIGHSYTTVAADAVARYKRLKGYDV--------------MFLTGT---------- 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    +EK   +     V  ++  I++  K 
Sbjct: 51  -----------------------DEHGQKIERKAKEKG--VTPKQYVDEIVAGIKELWKL 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP-----PPKSKTTQKCDMDR 306
           L I +D FI   D H      ++ I   L  QG +Y+         P +S  T+   +D 
Sbjct: 86  LKITNDRFIRTTDPHH--EKTVQKIFKKLYDQGDIYKSEYEGWYCTPCESFWTKTQLVDG 143

Query: 307 KQ--------------LLFRSTMVGD----------DVDRPLLKSDGSYTYFAA----DL 338
           K                 FR +   D          D  +P+ + +     F      DL
Sbjct: 144 KCPDCGREVELTKEESYFFRLSKYQDRLIKHIEENPDFIQPVSRQNEMLNNFLRPGLEDL 203

Query: 339 AYFKCKYERG----FD--NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKK 378
              +  ++ G    FD  +++YV                 D S Y K   A    V ++ 
Sbjct: 204 CVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITALNYMSEDDSDYRKYWPADVHLVGKEI 263

Query: 379 AQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + ++   + +                     KMSK  G+ +    +V++ G D++R+
Sbjct: 264 VRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGGKMSKSKGNVVDPVVLVEKYGVDAIRY 323

Query: 425 MMLWR 429
            +L  
Sbjct: 324 FLLRE 328


>gi|186684074|ref|YP_001867270.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186466526|gb|ACC82327.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 524

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 105/339 (30%), Gaps = 57/339 (16%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           +E G+  +        ++         H+GH R  +V D +   + F GYEV        
Sbjct: 42  VEAGKVKMYYCGVTVYDYC--------HLGHARACIVWDVVRRYLQFIGYEV-------- 85

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGY-YPGVYLKHVGKELADKYSSELLNFPEEK 228
                         RY Q   + D  +          ++ V       Y  ++      +
Sbjct: 86  --------------RYIQNFTDIDDKILNRACVEHSSMEAVANRFIKAYFEDMARLGIRE 131

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQG 284
                +       ++ +  +L+     +    D++ +   F        R  ++++    
Sbjct: 132 ADEYPRATHTMNGIQRLIHELEKKGFAYPADGDVYYAVRQFAEYGKLSGRK-LEDMQAGK 190

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
                +  P   K     D     L   +       + P     G   +     A  + +
Sbjct: 191 SERVNVEDPEYQKKKDPFDF---ALWKAAKPGETAWESPW--GAGRPGWHIECSAMVRDR 245

Query: 345 YERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                D  I+  G+D     H   + + EAV       K      L   +         K
Sbjct: 246 LGDTID--IHAGGADLIFPHHENEIAQSEAV-----TGKPLARYWLHNGMVKVDG---EK 295

Query: 400 MSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDF 437
           MSK  G+FIT+R ++D  V   +VR  +L  +    +DF
Sbjct: 296 MSKSLGNFITIRELLDRGVNPMAVRLFVLTAQYRTPIDF 334


>gi|149928079|ref|ZP_01916326.1| isoleucyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823165|gb|EDM82402.1| isoleucyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 931

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 55/296 (18%), Positives = 93/296 (31%), Gaps = 42/296 (14%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L      ++ P      + AM        + R     + +   +     + H   P 
Sbjct: 440 EKALAGVEATEFFPAWGKARLHAMIANRPDWTLSRQRQWGVPMAFLVHRETGELHPRTPE 499

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKS 327
               I   + +QG      +   +    +  D     D   + F S   G   +  L  S
Sbjct: 500 LTETIAQLIEKQGIEAWQHVSVEELIGHEAKDYVKNPDTLDVWFDS---GTTHETVLRGS 556

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLC 386
               ++F ADL               Y+ GSD   G+       +  ++       +L  
Sbjct: 557 HADESHFPADL---------------YLEGSDQHRGWFHSSLLTSCMINGVPPYKALLTH 601

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
             V    DG   KMSK  G+ I  + V D++G++ +R  +     S  L      +K   
Sbjct: 602 GFVV---DGQGRKMSKSVGNVIAPQQVSDKMGAEILRLWVASTDYSGELTISDEILKRVV 658

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +         +Y R R+  R       D DF         + +E D   L L+  L
Sbjct: 659 E---------SYRRIRNTLRFLLANISDFDFATEAVPT-EELAEVDQYALTLLGKL 704


>gi|219847425|ref|YP_002461858.1| leucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541684|gb|ACL23422.1| leucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 999

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 87/277 (31%), Gaps = 59/277 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGP-MHVGHCRCAVVGD 148
              P+ +     +   +   Y        K     ++F    P+G  + VGHCR  V  D
Sbjct: 13  RYDPAAIEAKWQAKWAADQIYRTPPIDPAKPKYYVLDFY-PYPSGDGLSVGHCRNYVPTD 71

Query: 149 TLASLMAFSGYEVT-----------REY---------------YINDAGAQINTLALSVF 182
            +A      GY V             E                Y  +   Q+N L LS  
Sbjct: 72  VVARYYRMRGYNVLHPMGWDAFGLPTENAAIKTKTNPAVLTRRYSANYKRQMNMLGLSYD 131

Query: 183 WRYQQALYNNDS-----DLPEGYYPGVYLKHVG--------KELADKYSSELLNFPEEKW 229
           W  +      D       +    Y   Y + V         +    +Y +  L+ P  + 
Sbjct: 132 WDREITSSEPDYYHWTQWIFLRLYQSWYDRRVDKARPISELEAELAEYGTSRLDLPLTE- 190

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVY 287
            P+  +    A     ++ L+   +           +RG+     D +D   LA +  + 
Sbjct: 191 PPVTAEDWRNATPLQRQEILRRFRLA----------YRGEAVVNWDPVDKTVLANEEVLP 240

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           +G      +K  ++     KQ  FR T   D +DR L
Sbjct: 241 DGTAWRSGAKVERRV---LKQWFFRITAYADRLDRDL 274


>gi|19745562|ref|NP_606698.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|25009357|sp|Q8P298|SYM_STRP8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19747684|gb|AAL97197.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 665

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGISPQTYVDN 73

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 74  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 134 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 194 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 251

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 252 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 307

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 308 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 337


>gi|76809344|ref|YP_332534.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254181497|ref|ZP_04888094.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254258530|ref|ZP_04949584.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|76578797|gb|ABA48272.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|184212035|gb|EDU09078.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254217219|gb|EET06603.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|34581409|ref|ZP_00142889.1| glutamyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262794|gb|EAA26298.1| glutamyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 513

 Score = 44.5 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 95/286 (33%), Gaps = 46/286 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I   + +PTG +H+G  R A+     A              + N          L + 
Sbjct: 4   NVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLRIE 44

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQ 239
              ++          E  + G+    +       + S+  N  +E  L ++   K Y   
Sbjct: 45  DTDKERSTKEAV---EAIFSGLKWLGLDWNGEVIFQSKRNNLYKEAALKLLQNGKAYYCF 101

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              + I    +        FI   ++   DPS     I  + R        L  P+  + 
Sbjct: 102 TRQEEIERQRQQALENKQHFIFNSEWRDKDPSIYPTDIKPVIR--------LKTPREGSI 153

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G D
Sbjct: 154 TIHDTLQGEVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GDD 205

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A       +       + L       K+SKR G
Sbjct: 206 HLTNAARQLAIYQAFGYAVPSMTH-----IPLIHGADGAKLSKRHG 246


>gi|322823230|gb|EFZ29025.1| valyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 975

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 50/199 (25%), Gaps = 35/199 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
                +       SG     + +     G    I     N TG +H+GH     V DTL 
Sbjct: 15  KDVESEWYEWWEKSGFFRPASDLGRKHNGNTFVIVSPPPNVTGYLHLGHSLTGAVQDTLI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V K
Sbjct: 75  RFHRMKGDNTLYVPGTDHAGIATQVV-------------------------------VEK 103

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L  +      +   E++L  V D+  +    +I   L+ + +  D              
Sbjct: 104 RLLRESGKTRHDLGREEFLKRVWDFK-ENHAHVITRQLRQIGLSLDWTRERFTMDDHCAG 162

Query: 272 PIRDIIDNLARQGYVYEGI 290
            + +    L   G V+   
Sbjct: 163 AVLEAFVKLHEDGLVHRST 181


>gi|300856628|ref|YP_003781612.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436743|gb|ADK16510.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 882

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 51/203 (25%), Gaps = 43/203 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L  +      +            I     N TG +H+GH     + D + 
Sbjct: 10  TYNPKEFEDRLYDLWQEKGYFTPKADKNKKSYTIVIPPPNITGKLHLGHALDDTIQDIII 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                    S  W                  PG     +  
Sbjct: 70  RTKRMQGY--------------------STLW-----------------LPGEDHASIAT 92

Query: 212 ELAD-----KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           E+       K   E      EK+L    D+S       IR+ +K L    D         
Sbjct: 93  EVKVEKELLKNGIEKKKIGREKFLEKTWDWS-NEYRGRIRNQVKKLGCSTDFTRERFTMD 151

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
            G    ++     L   G +Y+G
Sbjct: 152 EGLNKAVKKFFVKLYNDGLIYQG 174


>gi|295092788|emb|CBK78895.1| glutamyl-tRNA synthetase, bacterial family [Clostridium cf.
           saccharolyticum K10]
          Length = 489

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 109/298 (36%), Gaps = 48/298 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+  A      +  
Sbjct: 9   APSPTGKMHVGNLRTALYAYLIAKHEGGDYILRI-----EDTDQERYVEGA---TEIIYN 60

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++           D   P G Y     +  G  +  +Y+ +L++  E  +        + 
Sbjct: 61  TLKDTGLIHDEGPDVGGPVGPYVQSDRQKAG--IYMEYAKKLIDKGE-AYYCFCDQERLN 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           ++ K +  +   +  +H + +S            ++ ++     G  +      P+   T
Sbjct: 118 SLRKTVNGEEIMVYDKHCLHLS------------KEEVEANLAAGKPFVIRQNNPQEGRT 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              D     +   S    +  D  L+KSDG  TY  A++       +     + +V+ G+
Sbjct: 166 TFHDEIYGDI---SVDNSELDDMVLIKSDGYPTYNFANV------VDDHLQKITHVVRGN 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           ++     +   +  A   +      + C  +    +    K+SKR+G   + + ++D+
Sbjct: 217 EYLSSSPKYNRLYEAFGWEVP--VYVHCPTIT---NEEHKKLSKRSGHS-SYQDLIDQ 268


>gi|189459409|ref|ZP_03008194.1| hypothetical protein BACCOP_00032 [Bacteroides coprocola DSM 17136]
 gi|189433866|gb|EDV02851.1| hypothetical protein BACCOP_00032 [Bacteroides coprocola DSM 17136]
          Length = 1162

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 KFGSDPLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|188993104|ref|YP_001905114.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|254783560|sp|B0RVI4|SYV_XANCB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|167734864|emb|CAP53075.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 944

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 55/214 (25%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   S   +     G G    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWESAGHF--KPSGSGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRD--------------------- 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  Q+    I   ++ L    D   S         + +
Sbjct: 106 ---------TLGREGFIAKVWEWKAQSG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 TEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|323351085|ref|ZP_08086742.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122809|gb|EFX94518.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 679

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 30  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 77

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 78  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 130

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 131 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 184

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 185 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 244

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV   +             DH+ Y K        +  +   + + +   ++ +  
Sbjct: 245 PKHVIYVWIDALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 304

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 305 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 353


>gi|313678547|ref|YP_004056287.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950479|gb|ADR25074.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 779

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +   +   S   +      K  K  I  +   P+G +H+GH R   +GD LA      
Sbjct: 9   IEQKWQNYWDSSSYFEPKDDHKLAKKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRK 68

Query: 158 GYEV 161
           G+ V
Sbjct: 69  GFNV 72


>gi|146323058|ref|XP_755963.2| glutamyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129558595|gb|EAL93925.2| glutamyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 628

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 110/293 (37%), Gaps = 49/293 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+    LA      G  + R   I D   Q  T+  +    Y+  
Sbjct: 49  APSPTGYLHLGSLRTALFNYLLAK--RTGGQFLLR---IEDT-DQKRTIPGAEQRLYEDL 102

Query: 188 ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
               L  ++  L  G Y G Y +     +  +++++L+        F   + L  +  + 
Sbjct: 103 QWAGLQWDEGPLVGGPY-GPYRQSERTAIYREHANQLVQNGHAYRCFCSPERLDSLARHR 161

Query: 238 VQAMM-KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPK 295
            QA +          ++ +     SED   +G+   +R     L  +GY +++ ++    
Sbjct: 162 SQAGLPPGYDRQCADISAE----ESEDRAAKGEAHVVR-----LKVEGYPMFDDLVYGKT 212

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +      +D  + ++         D  LLKSDG  TY  A++       +     + +V
Sbjct: 213 GQNRSSSKLDLIERVYD--------DPILLKSDGHPTYHLANV------VDDHCMKITHV 258

Query: 356 M-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           + G++         A+  A +    +        V L  D    K+SKR  D 
Sbjct: 259 IRGTEWMPSTPMHVALYNAFNWTPPRFGH-----VPLLVDKSGQKLSKRNADI 306


>gi|88801785|ref|ZP_01117313.1| glutamyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782443|gb|EAR13620.1| glutamyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 506

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 95/293 (32%), Gaps = 48/293 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       ++     + TR     E YI DA    N  
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAKKHKGTFILRIEDTDQTRYVKNAEQYIVDALEWCNI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D    +    G Y +   KEL  +Y+  L+N            + 
Sbjct: 69  -------------PFDEGPGKNEKFGPYRQSERKELYKEYADILINTG-----WAYYAFD 110

Query: 238 VQAMMKIIRDDLKALNIQHDIFISED----DFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +   R D + +     ++   +               ++ + +   G  Y      
Sbjct: 111 TPEELDAHRKDDENVGKTF-VYNWHNRAKGSLVNSLVLTTSEVTEKIKD-GNNYVIRFKT 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+ +  +  D  R  +   +  +    D+ L K DG  TY    LA     +     ++I
Sbjct: 169 PQDEILRMEDEIRGNITIDTNTLD---DKILFKGDGMPTYH---LANIVDDHLMEISHVI 222

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              G +    +     +  A S    +   L   L  + +     K+SKR GD
Sbjct: 223 R--GEEWLPSMPLHILLYKAFSWNAPKFAHLPLLLKPVGKG----KLSKRDGD 269


>gi|239906853|ref|YP_002953594.1| isoleucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239796719|dbj|BAH75708.1| isoleucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 940

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 28/205 (13%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDG 395
           A  + + E GF   +Y+ GSD   G+      + A++  +       VL    V    DG
Sbjct: 551 AVLEKRPELGFPANMYLEGSDQHRGWFHSS--LLASMGTRGVAPYKQVLTHGYVV---DG 605

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  + ++D+ G++ +R         + +      +    +        
Sbjct: 606 EGRKMSKSLGNGMEPQEIIDKHGAEILRLWTSAVDYRDDIRISEEILARLVE-------- 657

Query: 456 YAYARCRSIFRQAKDIFPDLD---FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
            AY R R+  R       D D    D+ P +++P +     +       +AE       A
Sbjct: 658 -AYRRIRNTCRFILGNLSDFDPTAHDVAPADMLPLDRYALEAVAAGHQRMAE-------A 709

Query: 513 TIAQEPYKLAFYLYDLA-SVFHGHW 536
             A E +K+   L++L  +     +
Sbjct: 710 YEAYEFHKVFHTLHNLCVTDLSAFY 734


>gi|225181300|ref|ZP_03734745.1| glutamyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168080|gb|EEG76886.1| glutamyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 487

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 96/281 (34%), Gaps = 36/281 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A    ++G  + R   + D    ++   L        +
Sbjct: 9   APSPTGPLHIGGARSALFNWLFAR--RYNGTMIVR---VED--TDLDRSTLEYEELILDS 61

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     D  E    G   G Y +    ++   Y  +LL   +         Y  +  ++ 
Sbjct: 62  LRWLGIDWDEGITVGGDNGPYRQRERLDIYQPYVDKLLESGQAYHC-----YCSEEELEA 116

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            R +L A            D    D        +     G         P+ +     DM
Sbjct: 117 ERQELSAKGELPRYLGKCRDLSIKDK-------EEKCALGVKPVVRFRVPEGQQIVVDDM 169

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R ++ F S  +GD +   ++KSDG  TY   + A           +++   G +H    
Sbjct: 170 VRGRVSFDSDGIGDYI---IVKSDGIPTY---NFAVVLDDALMKVSHILR--GEEHLSNT 221

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R   +  A++ +  +        + L       KMSKR G
Sbjct: 222 PRQILLYEALAFELPRFAH-----ISLILGEDRSKMSKRHG 257


>gi|217966690|ref|YP_002352196.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217335789|gb|ACK41582.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 634

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 58/428 (13%), Positives = 138/428 (32%), Gaps = 46/428 (10%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ----- 187
               H+G     +V DT A       Y+V     +++ G ++   A    +  Q+     
Sbjct: 22  NSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQERGYTPQEYVDLM 81

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI---VKDYSVQAMMKI 244
           A    ++    G     +++   K   +          ++ +L        Y        
Sbjct: 82  AQKFIETWEKIGITNDDFIRTTEKRHEEVVQKVFQKLYDKGYLYKGSYAGWYCTPCETFW 141

Query: 245 IRDDLKALNIQHD----IFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTT 299
            +++L   N         ++ E+ ++    +    ++  +     +VY            
Sbjct: 142 QKEELHDGNCPACGRPVEWLEEETYYFKLSAFAEPLLKYIEEHPEFVYPETRRNEVISFI 201

Query: 300 QKCDMDRKQLLFRSTMVG------DDVDRPLLKSDGSYTYFAADLAYFKC---KYERGFD 350
           +    D      R+T+        D      +  D    Y +A L Y      K++R + 
Sbjct: 202 KSGLKDISAT--RTTVKWGIPVPFDPKHTVYVWFDALVNYISA-LGYLTDDDSKFKRYWP 258

Query: 351 NMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             ++++G D    + R  A+      ++        +L       + G   K+SK  G+ 
Sbjct: 259 ADVHLIGKD----ILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGG---KISKSKGNR 311

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    +++  G D++R+ +L R+    LD ++       + +            R +   
Sbjct: 312 VDPHELINLYGVDALRYFLL-REVPLGLDGEYSDEAFHRRYHSDLANDLGNLLNRVL--- 367

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                     + +    +P+  EF   +  L+    +    +E A     P     Y+++
Sbjct: 368 -------TVAEKYTEGKVPEPKEFQEEDKFLLQKGDDMANKVEEAMANFNPANALTYIWE 420

Query: 528 LASVFHGH 535
           +    + +
Sbjct: 421 VVQEANRY 428


>gi|254446531|ref|ZP_05060007.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260839|gb|EDY85147.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 911

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 42/349 (12%)

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQH 256
           +  V    V  +   K  + L    + KW+P      + A ++   D      ++  +  
Sbjct: 400 FRAVDQWFVAIDKNGKRKAALEAIEQVKWIPEWGQKRITANVEARPDWCISRQRSWGVPI 459

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             F  ED     D   I+ I D +A  G  ++            +  +  + + L   T 
Sbjct: 460 PAFYDEDGEAYMDADVIKAIADKVATAGTNLWYTSTVEELLSGIELPESWKGKTLKAGTD 519

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAV 374
             D      + S GS  +     A  K      +   +Y+ GSD   G+ +         
Sbjct: 520 TLD----VWIDS-GSSHF-----AVLKNTEGLSWPCDLYLEGSDQHRGWFQSSLWTGVIR 569

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +      ++L    + + +DG   K+SK  G  +TL H +D+ GSD VR  +        
Sbjct: 570 AGGAPYKSILTHGFL-VNQDG--SKLSKSDG-AMTLMHYMDKFGSDVVRLWVASTDFRND 625

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +     ++     +        AY   R+ FR       D DF+      I +  E D  
Sbjct: 626 IGIS-EQILGGVGD--------AYRLFRNTFRFQLSNLYDFDFEKDSMP-ISELHELDRW 675

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF-----HGHWSH 538
            +     + E    +E A    E +K+    + L + F        +  
Sbjct: 676 AVH---KVGELAEAVEKAYENYEFHKV----FQLCNQFCSVTLSSLYHD 717


>gi|281419111|ref|ZP_06250128.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407260|gb|EFB37521.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 654

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 113/365 (30%), Gaps = 118/365 (32%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH    V  D +A      GY+V                              
Sbjct: 15  PSDKLHIGHSYTTVAADAVARYKRLKGYDV--------------MFLTGT---------- 50

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    +EK   +     V  ++  I++  K 
Sbjct: 51  -----------------------DEHGQKIERKAKEKG--VTPKQYVDEIVAGIKELWKL 85

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP-----PPKSKTTQKCDMDR 306
           L I +D FI   D H      ++ I   L  QG +Y+         P +S  T+   +D 
Sbjct: 86  LKITNDRFIRTTDPHH--EKTVQKIFKKLYDQGDIYKSEYEGWYCTPCESFWTKTQLVDG 143

Query: 307 KQ--------------LLFRSTMVGD----------DVDRPLLKSDGSYTYFAA----DL 338
           K                 FR +   D          D  +P+ + +     F      DL
Sbjct: 144 KCPDCGREVELTKEESYFFRLSKYQDRLIKHIEENPDFIQPVSRQNEMLNNFLRPGLEDL 203

Query: 339 AYFKCKYERG----FD--NMIYVM--------------GSDHSGYVKRLEAVAAAVSEKK 378
              +  ++ G    FD  +++YV                 D S Y K   A    V ++ 
Sbjct: 204 CVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITALNYMSEDDSDYRKYWPADVHLVGKEI 263

Query: 379 AQINVLLCELVRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + + ++   + +                     KMSK  G+ +    +V++ G D++R+
Sbjct: 264 VRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGGKMSKSKGNVVDPVVLVEKYGVDAIRY 323

Query: 425 MMLWR 429
            +L  
Sbjct: 324 FLLRE 328


>gi|167917909|ref|ZP_02505000.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA 522
            +     E + + 
Sbjct: 721 AH-YEKYEFHPVV 732


>gi|120404905|ref|YP_954734.1| valyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957723|gb|ABM14728.1| valyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 897

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 25  DPGAVESDLYDGWVKAGYFTADPTSAKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRR 84

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 85  KRMQGYEVL-------WLPGMDHAGIATQTVVEKQLSAD--------------------- 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 117 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 171

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   +    D +
Sbjct: 172 RTIFKRLFDAGLIYQAERLVNWSPVLETAISDLE 205



 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 69/232 (29%), Gaps = 51/232 (21%)

Query: 363 YVKRLEAVAAAVSEKKA---------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V R+      V +  A         Q+      L  L RD    KMSK  G+ I     
Sbjct: 503 WVARMMMFGTFVGDDPAITGGGARGPQVPFENVFLHGLIRDEHGRKMSKSRGNGIDPLDW 562

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           V+  G+D++RF +                      +P   +       R+    A  +F 
Sbjct: 563 VEMFGADALRFTLAR------------------GASPGGDLAIGEDHARASRNFATKLFN 604

Query: 474 DLDFDLF----PRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKLAFYLY 526
              F L     P  + P +   D         L     V   ++ A    E  +      
Sbjct: 605 ATRFALLNGASPAPLPPSDQLTDADRW----ILGRLEEVRIEVDAALDNYEFSRACE--- 657

Query: 527 DLASVFHGHWSH-GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
              S++H  W         L  VQ    +    R        +++   L+++
Sbjct: 658 ---SLYHFAWDEFCDWYLELAKVQLGQEEAHTAR------TTAVLAFALDVL 700


>gi|88608827|ref|YP_506390.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600996|gb|ABD46464.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 851

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                 +    +   +  K  +  +   P+G +H+GH R  V+GD LA      GY V
Sbjct: 30  EQFSQSLWDFSSCDFQRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNV 87


>gi|85714102|ref|ZP_01045091.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85699228|gb|EAQ37096.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 877

 Score = 44.5 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +  +      I   +N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 7   ARDAEPRWQAEWDRQAIFATQNDDPREKYYVLEMF-PYPSGRIHIGHVRNYTLGDVIARY 65

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 66  KRARGYNV 73


>gi|317178546|dbj|BAJ56334.1| valyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 872

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 98/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLDQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIN---RTIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|308183700|ref|YP_003927827.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065885|gb|ADO07777.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|261838479|gb|ACX98245.1| valyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 872

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 97/315 (30%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D L       GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILTRYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIH---RTIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|291288265|ref|YP_003505081.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885425|gb|ADD69125.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 644

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 116/362 (32%), Gaps = 91/362 (25%)

Query: 159 YEVTREYYINDA---GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           Y  T  YY+ND    G    T+A     RY++    +   L      G  ++   +    
Sbjct: 7   YVTTPIYYVNDVPHIGHAYTTVACDTISRYKRLCGFDVCFLTGTDEHGQKIEQAAQ---- 62

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI-SEDDFHRGDPSPIR 274
           K         +E    +V+ ++            K LNI +D FI + D+ H+     +R
Sbjct: 63  KRGITPKALADE----VVQRFA---------GLWKILNISNDKFIRTTDELHKK---AVR 106

Query: 275 DIIDNLARQGYVYEGILPPPK--------------------SKTTQKCDMDRKQLLFRST 314
            I D +   G +Y                            S   +   +      FR +
Sbjct: 107 KIFDKMKENGDIYLDHYEGWYCTPCETYLTETQLLDGNCCPSCGRETAKLKEPSYFFRMS 166

Query: 315 MVGD----------DVDRPLLKSDGSYTYF---AADLAYFKCKYERGF------DNMIYV 355
              D          D  RP  + +   ++      DL+  +  ++ G       +++IYV
Sbjct: 167 KYADQLLKHIEDNKDFVRPESRRNEIISFIKDGLRDLSVSRVTFKWGIPVPDAPEHVIYV 226

Query: 356 M-------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG------- 395
                         G D + + K   A    V +   + + +    + +           
Sbjct: 227 WIDALTNYIAALGYGEDDADFQKFWPADYHVVGKDILRFHTVYWPTMLMSAGLPLPKSVF 286

Query: 396 -------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-DFDFCKVKEQSK 447
                     KMSK  G+ I    +VD+ G DS+R+ +L      L  DF F  +  +  
Sbjct: 287 AHGWWTVEGQKMSKSLGNAIDPAWLVDKFGVDSIRYFLLREVPFGLDGDFSFKALIHRIN 346

Query: 448 EN 449
            +
Sbjct: 347 GD 348


>gi|222624881|gb|EEE59013.1| hypothetical protein OsJ_10749 [Oryza sativa Japonica Group]
          Length = 1040

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 55/195 (28%), Gaps = 32/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + K   +   S   +  +         I     N TG +H+GH     + D +    
Sbjct: 103 PSTVEKSWYAWWESSGYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWR 162

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SGY       ++ AG     +      R +    ++    P+ +   V       +  
Sbjct: 163 RMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIG--PDNFVCEV------LKWK 214

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y   +LN                         L  L    D             + + 
Sbjct: 215 ERYGGTILNQ------------------------LHRLGASLDWSREAFTMDEQRSNAVT 250

Query: 275 DIIDNLARQGYVYEG 289
           +    L ++G +Y  
Sbjct: 251 EAFVRLHKEGLIYRD 265


>gi|197120433|ref|YP_002132384.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170282|gb|ACG71255.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 946

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 17/169 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A+        VL    +          MSK AG+ I   
Sbjct: 592 LYLEGSDQHRGWFHSSLLTSMALRGAAPYRAVLTHGFILDQHGKA---MSKSAGNGIEPS 648

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R  +      + +     ++     E         Y + R+  R A   
Sbjct: 649 EIIKKYGADILRLWVSASDYRDDIGLG-DQILAGLAEG--------YRKIRNTIRYALGA 699

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
               D     R+ +P+          L   LA +   +  A    E + 
Sbjct: 700 LDGFD---PARDAVPEAELEPIDRWALAR-LAAWDEKVAKAYEDYEFHL 744


>gi|34557610|ref|NP_907425.1| leucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|48428520|sp|Q7M926|SYL_WOLSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34483327|emb|CAE10325.1| LEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 819

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + K       +   +         K  I  +   P+G +H+GH R   +GD +A  
Sbjct: 4   NPKAIEKKWQEHWKNKRTHEPLSDTSLPKKYILSMFPYPSGRIHMGHVRNYCIGDAIARH 63

Query: 154 MAFSGYEV 161
                + V
Sbjct: 64  FRKQNFNV 71



 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 11/93 (11%)

Query: 341 FKCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRD 394
              +Y  G D   Y+ G +H+     Y +    V   +   +       LL + + L +D
Sbjct: 526 AMQRYWMGVDE--YIGGIEHAILHLLYARFFTKVLRDLGYTETNEPFTHLLTQGMVL-KD 582

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           G   KMSK  G+ +    +++  G+D+ R  +L
Sbjct: 583 GA--KMSKSKGNVVDPDELIERFGADTARLFVL 613


>gi|315587041|gb|ADU41422.1| valine--tRNA ligase [Helicobacter pylori 35A]
          Length = 872

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 103/322 (31%), Gaps = 44/322 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPL------LKSDGSYTY 333
               K        R + LF  + +             G  V  PL      + +D   ++
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLINRKIPIIAD---SH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              +      K   G D   Y +G  H     ++        ++K  +NV   E   L R
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNVHCGEFENLER 318

Query: 394 DGMPIKMSKRAGDFITLRHVVD 415
                K+ +R  +   L  + +
Sbjct: 319 LKARDKVVERLKENALLEKIEE 340


>gi|260909686|ref|ZP_05916380.1| glutamate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636111|gb|EEX54107.1| glutamate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 505

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 60/294 (20%), Positives = 101/294 (34%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++   + I D  +Q    
Sbjct: 1   MSERKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQQGGDLV--FRIEDTDSQRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   KE+  +Y  +LLN   E    I 
Sbjct: 55  GAEEYIIESFRWLGIKFDEGVTF--GGKYGPYRQSERKEIYKQYVDQLLN---EGKAYIA 109

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            D   +   K      +A            +  R   +   + ++ L   G  Y      
Sbjct: 110 FDTPQELEAK------RAATENFQYDAHTRNEMRNSLTMSAEEVETLIGDGTQYVVRFMV 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     DM R  ++ +S ++    D+ L KS DG  TY    LA     +     ++
Sbjct: 164 MPGEEVHVNDMIRGDVMIKSDILD---DKVLYKSADGLPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A              L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYKAFGWADTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|257460757|ref|ZP_05625858.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442088|gb|EEV17230.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 815

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S S   K        G+   ++      K  +      P+G +H+GH R   +GD L+  
Sbjct: 5   SKSIELKWQKIWDEEGVFEPKDDYSLPKKYILSMF-PYPSGRIHMGHVRNYSIGDALSRY 63

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 64  YRLRGYNV 71


>gi|227327168|ref|ZP_03831192.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 642

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +        +I     N TG +H+GH     + DTL   
Sbjct: 6   NPQDIEQPLYEHWEKQGYFKPHGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  E ++  +  +  ++   I    ++ L    D          G  + +
Sbjct: 95  AAEEGKTRHDYGREAFIDKIWQWKGESGGNITNQ-MRRLGNSVDWERERFTMDEGLSNAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          +    D +
Sbjct: 154 KEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|227504037|ref|ZP_03934086.1| valyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199367|gb|EEI79415.1| valyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 941

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 58/211 (27%), Gaps = 32/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    V    +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 43  PQAVEKDLYESWVEAGYFTPDATSEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 102

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++   + +  L   +      Y    ++  V  E  
Sbjct: 103 RMQGYATL-------WLPGADHAGIATQTKVEAKLKETEGKKRWDYEREEFISKV-WEWK 154

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y                           I+  ++A+    D          G    ++
Sbjct: 155 EEYG------------------------GTIQKQMRAIGDSVDWSRERFTLDEGLSRAVQ 190

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            I   L   G +Y+       S   +    D
Sbjct: 191 TIFKQLFDAGMIYQAHRLVNWSPVLETAVSD 221


>gi|189030336|sp|Q2GDQ6|SYL_NEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 831

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                 +    +   +  K  +  +   P+G +H+GH R  V+GD LA      GY V
Sbjct: 10  EQFSQSLWDFSSCDFQRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNV 67


>gi|94993743|ref|YP_601841.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94547251|gb|ABF37297.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Streptococcus pyogenes MGAS10750]
          Length = 666

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|21230121|ref|NP_636038.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769888|ref|YP_244650.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81304158|sp|Q4UQP3|SYV_XANC8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81796534|sp|Q8PCR7|SYV_XANCP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21111650|gb|AAM39962.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575220|gb|AAY50630.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 944

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 55/214 (25%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   S   +     G G    +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWESAGHF--KPSGSGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRD--------------------- 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  Q+    I   ++ L    D   S         + +
Sbjct: 106 ---------TLGREGFIAKVWEWKAQSG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 TEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|93006962|ref|YP_581399.1| valyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92394640|gb|ABE75915.1| valyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 984

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 68/220 (30%), Gaps = 40/220 (18%)

Query: 93  LSPSYLRKILSSIVVSGIE---YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L  +Y    + + +  G E   Y +    K    +I     N TG +H+GH     + D 
Sbjct: 24  LENAYNPAEVEAGMYQGWEESGYFQPTFDKDESFSIALPPPNVTGSLHMGHGFNNAIMDA 83

Query: 150 LASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           L       G     +   + AG   Q+      V  R  +A              G+  +
Sbjct: 84  LTRYHRMDGDNTLWQPGTDHAGIATQM------VVERRLEA-------------QGIKRR 124

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            + +E          +F ++ W    K+ S   +   IR     L    D          
Sbjct: 125 DMTRE----------DFIDKVWE--WKEESGGNITSQIR----RLGSSVDWSRERFTMDD 168

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 169 GLSNAVKEVFVRLFDDGLIYRGKRLVNWDPKFQTALSDLE 208


>gi|47569887|ref|ZP_00240554.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553421|gb|EAL11805.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 626

 Score = 44.5 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 81/292 (27%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++  ++    EE  L +     V  ++  I++  + ++I +D FI            + 
Sbjct: 19  DEHGQKIQKKAEE--LNVTPQAYVDNIVAGIKELWEKMDISYDDFI--RTTEDRHKDVVE 74

Query: 275 DIIDNLARQGYVY----------------------EGILPPPKSKTTQKCDMDRKQLLFR 312
            I   L  QG +Y                      + I+   K    +  D      L R
Sbjct: 75  KIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVR 134

Query: 313 STMV----GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG--- 348
                   G  VDR L   + +  +                    DLA  +  ++ G   
Sbjct: 135 EESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRV 194

Query: 349 ---FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                ++IYV              G+++   Y K   A    V ++  + + +   ++ +
Sbjct: 195 PGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILM 254

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 255 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 306


>gi|317014979|gb|ADU82415.1| leucyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|317058811|ref|ZP_07923296.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684487|gb|EFS21322.1| glutamyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 502

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 93/283 (32%), Gaps = 40/283 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTG  HVG    A+     A+      ++     +  R       G++   +  ++
Sbjct: 12  IAPSPTGDPHVGTAYIALFNLAFANHNGGDFILRIEDTDQNR----YTEGSE-QMIFDAL 66

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W         D     G   G Y +    +L  KY+ EL+      +        +  +
Sbjct: 67  HWLGLDYAEGPDV----GGDYGSYRQSERFDLYVKYAKELVEKGG-AYYCFCTSDRLDNL 121

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  +   KA                   S  ++ I+     G  Y   L  P    T  
Sbjct: 122 RERQKAMGKAPGYDGHC-----------RSLTKEEIEAKLAAGEPYVIRLKMPYEGETVI 170

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  ++F +  +    D+ LLK+DG  TY    LA     +  G  ++I     +  
Sbjct: 171 HDRLRGDIVFENNKID---DQVLLKADGFPTYH---LANVVDDHLMGITHVIR--AEEWI 222

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
               +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 223 PSTPKHIQLYKAFGWEAPEFIHM-----PLLRNSDRTKISKRK 260


>gi|268319697|ref|YP_003293353.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262398072|emb|CAX67086.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 58/320 (18%)

Query: 215 DKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD    
Sbjct: 428 DKFRDQILAEIEKANFIPTWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPIV 486

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            P  I  +     ++G            + EG           + + D   + F S   G
Sbjct: 487 TPETIEHVAQIFEKEGSNAWYTHTAEELLPEGFKSEHSPNGKFRKETDILDVWFDS---G 543

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 + + DG                  GF   +Y+ GSD   G+       + AV+ 
Sbjct: 544 SSWAGVMQERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVTG 586

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  + 
Sbjct: 587 KAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDVA 643

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +++ ++         +Y + R+  R       D D                  E+
Sbjct: 644 VSQDILRQSAE---------SYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEI 694

Query: 497 QLIVHLAEYPRVIENATIAQ 516
           +L        R+IE A  A 
Sbjct: 695 KL-------NRLIEEAIEAY 707


>gi|238651078|ref|YP_002916936.1| glutamyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238625176|gb|ACR47882.1| glutamyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 513

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 96/286 (33%), Gaps = 46/286 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I   + +PTG +H+G  R A+     A              + N          L + 
Sbjct: 4   NVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLRIE 44

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQ 239
              ++          E  + G+    +       + S+  N  +E  L ++   K Y   
Sbjct: 45  DTDKERSTKEAV---EAIFSGLKWLGLDWNGEVIFQSKRNNLYKEAALKLLQNGKAYYCF 101

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              + I    +        FI   ++   DPS     I  + R        L  P+  + 
Sbjct: 102 TRQEEIERQRQQALENKQHFIFNSEWRDKDPSIYPTDIKPVIR--------LKTPREGSI 153

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G+D
Sbjct: 154 TIHDTLQGEVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GND 205

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A       +       + L       K+SKR G
Sbjct: 206 HLTNSARQLAIYQAFGYAVPSMTH-----IPLIHGADGAKLSKRHG 246


>gi|218192777|gb|EEC75204.1| hypothetical protein OsI_11456 [Oryza sativa Indica Group]
          Length = 1040

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 55/195 (28%), Gaps = 32/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + K   +   S   +  +         I     N TG +H+GH     + D +    
Sbjct: 103 PSTVEKSWYAWWESSGYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWR 162

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
             SGY       ++ AG     +      R +    ++    P+ +   V       +  
Sbjct: 163 RMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIG--PDNFVCEV------LKWK 214

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y   +LN                         L  L    D             + + 
Sbjct: 215 ERYGGTILNQ------------------------LHRLGASLDWSREAFTMDEQRSNAVT 250

Query: 275 DIIDNLARQGYVYEG 289
           +    L ++G +Y  
Sbjct: 251 EAFVRLHKEGLIYRD 265


>gi|167646113|ref|YP_001683776.1| valyl-tRNA synthetase [Caulobacter sp. K31]
 gi|167348543|gb|ABZ71278.1| valyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 907

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +   L +   +   +  +         I     N TG +H+GH     + D L 
Sbjct: 5   TFDPKSVEPRLYAAWEASGAFKPSEDPNAESFTIVIPPPNVTGSLHIGHALNNTLQDVLT 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V +
Sbjct: 65  RFHRMRGKSALWLPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA   +        E ++  V ++  ++    I + L+ L    D          G  +
Sbjct: 94  QLAAAGNIGRREMGREAFVEKVWEWKAESG-GAITNQLRRLGASCDWSRERFTLDEGLSA 152

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L +   +Y            Q    D +
Sbjct: 153 AVRKVFVQLYKDKLLYRDKRLVNWDPQFQTAISDLE 188



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 13/94 (13%)

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DLA  Y       GFD +I+         V R+  +      +     V +  LV   
Sbjct: 494 TEDLAKFYPTSTLVTGFD-IIFFW-------VARMMMMGIHFMGEVPFKQVFINALV--- 542

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           RD    KMSK  G+ +    ++DE+G D+VRF M
Sbjct: 543 RDEKGAKMSKSKGNVLDPLVLIDELGCDAVRFTM 576


>gi|71902998|ref|YP_279801.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71802093|gb|AAX71446.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 666

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 109/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ ++ +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +       + L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPDRLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|328471443|gb|EGF42338.1| valyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 952

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|238809991|dbj|BAH69781.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 516

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 112/352 (31%), Gaps = 54/352 (15%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +GP+H+GH  C ++   + +     GY+       ++ G +I   AL             
Sbjct: 19  SGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQEKALVA--------KKE 70

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                +             E+   Y S       E+ +  +  Y +Q  + I +   + L
Sbjct: 71  PKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGL-IYKGSYQGL 129

Query: 253 N------------------------IQHDIFISEDDFHRGDPSPIRDIIDNLARQG---- 284
                                     +H++   E++ +    + ++       ++     
Sbjct: 130 YSVQDEEFLTKNQAVYKDGKYYHPSSKHELINMEEESYFFKMNEVQKWWSKYNKKHPDFL 189

Query: 285 ---YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
               V   +      +  +   + R  + +    + D      +  D  + Y    L + 
Sbjct: 190 LPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALFNYITK-LGFD 248

Query: 342 KCKYERGF-------DNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             K +  F       D +++++G + +  +      V   +  K     V       L R
Sbjct: 249 FNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVSHG----LLR 304

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
           D   +KMSK   + I   ++ D+   + +++    +    E  +F   K+KE
Sbjct: 305 DKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKE 356


>gi|172039150|ref|YP_001805651.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710934|sp|B1WSK6|SYL_CYAA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171700604|gb|ACB53585.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 853

 Score = 44.5 bits (104), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K     V  G++       K     +      P+G +H+GH R  V+ D +A L    G
Sbjct: 12  QKWQQDWVNQGLDKTPENSDKPKFYALSMF-PYPSGNLHMGHVRNYVITDVIARLKRLQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YRV 73


>gi|319777619|ref|YP_004137270.1| methionyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038694|gb|ADV34893.1| Methionyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 514

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 112/352 (31%), Gaps = 54/352 (15%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +GP+H+GH  C ++   + +     GY+       ++ G +I   AL             
Sbjct: 17  SGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQEKALVA--------KKE 68

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                +             E+   Y S       E+ +  +  Y +Q  + I +   + L
Sbjct: 69  PKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGL-IYKGSYQGL 127

Query: 253 N------------------------IQHDIFISEDDFHRGDPSPIRDIIDNLARQG---- 284
                                     +H++   E++ +    + ++       ++     
Sbjct: 128 YSVQDEEFLTKNQAVYKDGKYYHPSSKHELINMEEESYFFKMNEVQKWWSKYNKKHPDFL 187

Query: 285 ---YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
               V   +      +  +   + R  + +    + D      +  D  + Y    L + 
Sbjct: 188 LPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALFNYITK-LGFD 246

Query: 342 KCKYERGF-------DNMIYVMGSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             K +  F       D +++++G + +  +      V   +  K     V       L R
Sbjct: 247 FNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVSHG----LLR 302

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKE 444
           D   +KMSK   + I   ++ D+   + +++    +    E  +F   K+KE
Sbjct: 303 DKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKE 354


>gi|313141807|ref|ZP_07804000.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130838|gb|EFR48455.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 813

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       SG    +       K  +      P+G +H+GH R   + D +A  +   GY
Sbjct: 12  KWQDFWENSGEYEPKEDKSLPKKYILSMF-PYPSGNIHMGHVRNYCISDAIARNLRKQGY 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|313884762|ref|ZP_07818517.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620023|gb|EFR31457.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 475

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 69/422 (16%), Positives = 136/422 (32%), Gaps = 74/422 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R AV  DT+   + + GY+V    Y+++     + +  +       
Sbjct: 29  CGPTVYNYIHIGNARSAVAFDTVRRYLQYRGYQV---NYVSNFTDVDDKIIKAAKA---- 81

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKII 245
                  DL        Y+    ++ A       +N       P VKD+  + +  +K++
Sbjct: 82  ------EDLSTEALSDKYIAAFKEDTAA------INILPANIHPRVKDHITEIIDYIKVL 129

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   A   Q D++     F            D   +  +     L    S+ T   + D
Sbjct: 130 IESDHAYASQGDVYFRTQSF------------DGYGKLSHQSISELEIGASQRTDTAETD 177

Query: 306 RK------QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           RK       L   +         P     G   +    +       +   D +  + G  
Sbjct: 178 RKEDPLDFALWKSAKEGEVSWPSPW--GPGRPGWH---IECSVMSTKYLGDTL-DIHGGG 231

Query: 360 HSGYVKRLE-AVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                   E  +A A +    +      +    V    DG   KMSK  G+F+ LR ++ 
Sbjct: 232 QDLEFPHHENEIAQAEAHNHGENFANYWMHNGFVTFGEDGE--KMSKSLGNFVLLRDLLK 289

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           E     VR+++        L +D  +  ++++ N                ++ +++   L
Sbjct: 290 EADPMVVRYLLGTVHYRRPLRYD-DQALQEAQTN---------------IKRLEEVSRRL 333

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA--QEPYKLAFYLYDLASVFH 533
           D  L        ++  DT E  L V LA+       A          +   +++L    +
Sbjct: 334 DLRLAD---ATTQANLDTDEANLAV-LAQLEADFIQAMDDDFNAANGMTV-IFELVKEIN 388

Query: 534 GH 535
            +
Sbjct: 389 RY 390


>gi|224418274|ref|ZP_03656280.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827598|ref|ZP_04870483.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511004|gb|EES89663.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 812

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       SG    +       K  +      P+G +H+GH R   + D +A  +   GY
Sbjct: 11  KWQDFWENSGEYEPKEDKSLPKKYILSMF-PYPSGNIHMGHVRNYCISDAIARNLRKQGY 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|330887714|gb|EGH20375.1| valyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 941

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 35/211 (16%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            +         S   +    +G    + I     N TG +H+GH     + D L      
Sbjct: 2   AIETSWYQTWESENYFAPQGVGDSYTIMI--PPPNVTGSLHMGHGFNNAIMDALIRFRRM 59

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G     +   + AG     L      R  +A   +  +L                    
Sbjct: 60  QGRNTLWQPGTDHAGIATQMLV----ERRLEAQGISRHEL-------------------- 95

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                     EK+L  + ++  ++   I R  ++ L    D          G    +++ 
Sbjct: 96  --------GREKFLDKIWEWKAESGGNISRQ-IRRLGSSVDWSRERFTMDDGLSDAVKEA 146

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              L   G +Y G               D +
Sbjct: 147 FVRLHEDGLIYRGKRLVNWDTKLHTAISDLE 177


>gi|300814290|ref|ZP_07094562.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511557|gb|EFK38785.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 653

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 104/326 (31%), Gaps = 38/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---YQQA 188
           P+  +H+GH  C V  D +       GY V      ++ G +I T A         Y   
Sbjct: 14  PSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQEAGMEPKAYVDK 73

Query: 189 LYNNDSDLPE-------------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           +  N   L E                    ++ + K+L DK         E  +    + 
Sbjct: 74  IVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDK-GDIYKGEYEGYYCTPCES 132

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  QA +           +       E+ +          ++D L       E      +
Sbjct: 133 FWTQAQVGDDHACPDCGRVT--QLTKEESYFFRLSKYKDKLLDLLNNNEEFTEPAFRKNE 190

Query: 296 --------SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYE 346
                   ++  +   + R  L +   +  D+     +  D    Y +A +    K K+ 
Sbjct: 191 LIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLSAIEFGTDKEKFN 250

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
             +   ++++G +    + R  A+      ++        +      L+ +    KMSK 
Sbjct: 251 EFWPADVHLVGKE----IFRFHALIWPALLMALDLPLPKKIFGHGWILFDN---DKMSKS 303

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ +    ++   G D++++ +L  
Sbjct: 304 KGNVVYPEPIIKLYGVDALKYFLLRE 329


>gi|300214279|gb|ADJ78695.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 805

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 34/287 (11%)

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
             +Y +N  G     +  +   R  +     D  + +    G   K          +S+ 
Sbjct: 323 IADYVLNSYGTGAVMVVPAHDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDF 382

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           LN  +       K+ ++ A+   + ++    K +N +   ++     + G+P P+    D
Sbjct: 383 LNGMD-------KEEAIDAINNWLEENGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWED 435

Query: 279 NLARQGYVYEGILPPPKSKTTQK----------CDMDRKQLLFRST-MVGDDVDRPLLKS 327
                  V E  LP    K T             ++D    +       G      + + 
Sbjct: 436 G--ETTLVPEDELPLYLPKATDIKPSGTGESPLANLDDWVNVVDENGRKGRRETNTMPQW 493

Query: 328 DGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSE 376
            GS  YF   +          ++ +       +YV G++H+     Y +        +  
Sbjct: 494 AGSSWYFLRYIDPHNNHEVADYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGV 553

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +          +       KMSK  G+ +    +V++ G+D++R
Sbjct: 554 VPTKEPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVEQYGADTLR 600


>gi|282859714|ref|ZP_06268815.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587525|gb|EFB92729.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 1220

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 76/303 (25%), Positives = 115/303 (37%), Gaps = 47/303 (15%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++  D+   E     V   +   E A        N  +
Sbjct: 575 LNDW-----NLSRSRFWGTPLPIWR-DNARGEKCIGSVEELYNEIEKAVAAGVMQSNPLK 628

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGY 285
           +    +V DYS +   KI   DL    +   + ++E    +GDP     D+ID     G 
Sbjct: 629 DNGF-VVGDYSQENYDKI---DLHRPFVDDIVLVNE----QGDPMHRESDLIDVWFDSGS 680

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKC 343
           +    L  P   T  K  ++      R  M  D+    L+ S    TY    +  A+F  
Sbjct: 681 MPYAQLHYPFEGTINKDGLE------RLGMTEDEYREKLVHS----TYDGIAVPPAFFPA 730

Query: 344 KYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            +       I   G D   G+   L A+A  V +  A  NV+   LV    D    KMSK
Sbjct: 731 DF-------INE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMSK 779

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYV 454
             G+ I+   ++D+ G+D VRF M+      + L FD   V E  ++          F+ 
Sbjct: 780 HVGNVISPFEMLDKYGADPVRFYMMTNSEPWDNLKFDPEGVDESRRKFFGTLYNTYSFFA 839

Query: 455 QYA 457
            YA
Sbjct: 840 LYA 842


>gi|282883266|ref|ZP_06291864.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281296896|gb|EFA89394.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 653

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 104/326 (31%), Gaps = 38/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---YQQA 188
           P+  +H+GH  C V  D +       GY V      ++ G +I T A         Y   
Sbjct: 14  PSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQEAGMEPKAYVDK 73

Query: 189 LYNNDSDLPE-------------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
           +  N   L E                    ++ + K+L DK         E  +    + 
Sbjct: 74  IVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDK-GDIYKGEYEGYYCTPCES 132

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  QA +           +       E+ +          ++D L       E      +
Sbjct: 133 FWTQAQVGDDHACPDCGRVT--QLTKEESYFFRLSKYKDKLLDLLNNNEEFTEPAFRKNE 190

Query: 296 --------SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYE 346
                   ++  +   + R  L +   +  D+     +  D    Y +A +    K K+ 
Sbjct: 191 LIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLSAIEFGTDKEKFN 250

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
             +   ++++G +    + R  A+      ++        +      L+ +    KMSK 
Sbjct: 251 EFWPADVHLVGKE----IFRFHALIWPALLMALDLPLPKKIFGHGWILFDN---DKMSKS 303

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ +    ++   G D++++ +L  
Sbjct: 304 KGNVVYPEPIIKLYGVDALKYFLLRE 329


>gi|226360454|ref|YP_002778232.1| valyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238939|dbj|BAH49287.1| valyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 891

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 78/269 (28%), Gaps = 43/269 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   L    V    +  +        +I     N TG +H+GH     + D L+  
Sbjct: 21  DPSSVEDDLYQGWVDAGYFRADPHSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALSRR 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 81  KRMQGYEVL-------WLPGMDHAGIATQTVVEKQLAVD--------------------- 112

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ +    D          G    +
Sbjct: 113 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGGQMRRIGDSVDWSRDRFTMDDGLSRAV 167

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKC---------DMDRKQLLFRSTMVGDDVDRPL 324
           + I   +   G +Y        S   Q           D++ + +  R   + DD    +
Sbjct: 168 QTIFKRMYDDGLIYRAERLVNWSPVLQTAISDIEVKFEDVEGELVSLRYGSLNDDEPHVV 227

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           + +    T    D A      +  + ++I
Sbjct: 228 VATTRVET-MLGDTAVAVHPDDERYRHLI 255


>gi|208435427|ref|YP_002267093.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208433356|gb|ACI28227.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|167527031|ref|XP_001747848.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773597|gb|EDQ87235.1| predicted protein [Monosiga brevicollis MX1]
          Length = 593

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 51/176 (28%), Gaps = 32/176 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     V D LA      G+EV      + AG    T+     W+ Q+  
Sbjct: 5   PNVTGTLHLGHALTIAVQDALARWHRMLGHEVLWLPGADHAGIATQTVVEKHLWKTQETT 64

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            +                       D +  E+  + +EK   I                +
Sbjct: 65  RHQLGR-------------------DAFIQEVFKWRDEKAGRIFHQ-------------M 92

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + L    D         +     +R     L RQG +Y        S   Q    D
Sbjct: 93  RMLGASLDWSREVFTMDQRFTKAVRSAFIRLHRQGLIYRAHRIVNWSPALQSAISD 148


>gi|148360414|ref|YP_001251621.1| isoleucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|166229745|sp|A5IFX5|SYI_LEGPC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148282187|gb|ABQ56275.1| isoleucyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 931

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 74/242 (30%), Gaps = 28/242 (11%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD---DVDRPLLKSDGSYTYFAADLAYF 341
            +    +   KS      D+D  +LL       D   D     L S G   Y        
Sbjct: 491 LIERVAVMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDS-GISHYSV-----L 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K   +  F   +Y  GSD   G+       A A+        VL         D    K+
Sbjct: 545 KHNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGY---TVDAEGKKL 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY R
Sbjct: 602 SKSKGNYVALDKLVNQHGADILRLWVASTDYRHEVSISEEIIKRNAD---------AYRR 652

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY 519
            R+  R       D +      + I  +   +     L    L +    I  A      +
Sbjct: 653 IRNTARFLLANLFDFN---PASDCIDAKELLELDRWALKRCQLLQ--EEIITAYENYHFH 707

Query: 520 KL 521
            +
Sbjct: 708 LI 709


>gi|153004343|ref|YP_001378668.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027916|gb|ABS25684.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 1052

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 32/189 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +     +  G  +G          +I     N TG +H+GH   A + D L      SG
Sbjct: 20  ARWYPFWLERGYFHGDEHDRSRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSG 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +        + AG     +                               V KEL     
Sbjct: 80  FNTLWLPGTDHAGIATQMI-------------------------------VEKELRKTEK 108

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E++L  V  +  +   + I +  +AL    D               +R++  
Sbjct: 109 LSRHDLGREEFLKRVWAWKERYGSR-IGEQHQALGASLDWERERFTMDERSSRAVREVFV 167

Query: 279 NLARQGYVY 287
            L  +G VY
Sbjct: 168 RLHEEGLVY 176


>gi|86609140|ref|YP_477902.1| glutamyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|115305793|sp|Q2JKY3|SYE_SYNJB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|86557682|gb|ABD02639.1| glutamyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 479

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 93/293 (31%), Gaps = 53/293 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW---- 183
           ++ +PTG +H+G  R AV     A                           L +      
Sbjct: 7   IAPSPTGNLHIGTARTAVFNWLYAR-------------------RHGGRFILRIEDTDRD 47

Query: 184 ----RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               RY + +    + L   +  G   +    E       +LL+     +   V +  ++
Sbjct: 48  RSLPRYTRNILAGLAWLGLDWDEGPVYQSKRIERYQAVVQQLLDRGL-AYRCYVSEAELE 106

Query: 240 AMMKIIRDDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            M    +   KA        F++E           R   +   RQ  +   I  P +   
Sbjct: 107 EMRAAQKAAGKAPRYDNRHRFLTEAQ---------RRAYEAEGRQPVIRFKIEEPLE--- 154

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ R  + + +  +G D+   + ++DG   Y   +LA      + G  ++I   G 
Sbjct: 155 VSWVDLIRGPITWNTQDLGGDM--VIARADGCPLY---NLAVVVDDIDMGITHVIR--GE 207

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           DH G   +   +  A+  +  Q          L  +    K+SKR G      
Sbjct: 208 DHIGNTPKQILLYRALGHEPPQFAHS-----PLILNPEGKKLSKRDGATSVAE 255


>gi|15646154|ref|NP_208338.1| leucyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024678|sp|P56457|SYL_HELPY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2314727|gb|AAD08585.1| leucyl-tRNA synthetase (leuS) [Helicobacter pylori 26695]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|308064327|gb|ADO06214.1| leucyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|308062828|gb|ADO04716.1| leucyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|308185334|ref|YP_003929467.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308061254|gb|ADO03150.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|282856784|ref|ZP_06266045.1| glutamate--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585407|gb|EFB90714.1| glutamate--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 446

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 76/244 (31%), Gaps = 42/244 (17%)

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G+      +     D     L+      G   D  L+KSDG  TY   + A     +   
Sbjct: 119 GLDIGFDDEVYGHVDYKSDALI--DGRTGVMKDIVLIKSDGFPTY---NYAVVVDDHLMK 173

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--D 406
             ++I   G DH     +   +  A+  +  +        + +       K+SKR G   
Sbjct: 174 ISHVIR--GEDHISNTPKQVLIYKALGWEMPKFAH-----LPMILGKDKKKLSKRHGATS 226

Query: 407 FITLRHV---------------------VDEVGSD-SVRFMMLWRKNSELLDFDFCKVKE 444
               R +                     V+  G D +++   L   N +   FDF K+  
Sbjct: 227 VYEYRDMGYLPDSIFNFLALLGWAPKGNVEVFGRDLAIKEYELRNINRKSSVFDFDKLNF 286

Query: 445 QSKENPVFY-VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            ++E+     V+  +   R  + +       LD D   +          T     I  LA
Sbjct: 287 INQEHITEMPVREKFELVRPFWEEMGVDCDKLDLDYLGKCFGIMAGRGKT-----IKELA 341

Query: 504 EYPR 507
           E+  
Sbjct: 342 EFSD 345


>gi|255348662|ref|ZP_05380669.1| valyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503202|ref|ZP_05381592.1| valyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506880|ref|ZP_05382519.1| valyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 61/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKRRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|218888174|ref|YP_002437495.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|254782495|sp|B8DJF0|SYL_DESVM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218759128|gb|ACL10027.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 834

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   SG  +  +   K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 11  KWQRTWEESGAFHCDHHSDKPKYYVLEMF-PYPSGNIHMGHVRNYSIGDVVARFKRMQGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|209549076|ref|YP_002280993.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534832|gb|ACI54767.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 947

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D +       G +V  +  
Sbjct: 22  EDAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 81/256 (31%), Gaps = 45/256 (17%)

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     P++  +++L        G +                 L   ST+   D    L 
Sbjct: 479 YLSHEGPMKAYVEDLLEN--FKPGEILTRDEDVLDTWFSS--ALWPFSTLGWPDQTPELA 534

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI-YVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
           +      Y  + L         GFD +  +V+       +  + E       +     + 
Sbjct: 535 R-----YYPTSVLVT-------GFDIIPFWVVRMMQMGLHFMKDEN-----GDPVEPFHT 577

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +      L RD    KMSK  G+ I    ++DE G+D++R             F    + 
Sbjct: 578 IYIHA--LVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIMA 622

Query: 444 EQSKE---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            Q ++   +P     Y   R           F +++      + +P+ +E   +   ++ 
Sbjct: 623 AQGRDVKLDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILT 678

Query: 501 HLAEYPRVIENATIAQ 516
            LA   R +  A  A 
Sbjct: 679 ELARTERDVTEALEAF 694


>gi|84622414|ref|YP_449786.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123752817|sp|Q2P7G5|SYV_XANOM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|84366354|dbj|BAE67512.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 980

 Score = 44.5 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 57/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  G+   V +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPSDTGEPYTVLL--PPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V +++  +    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIAKVWEWNAASG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|295396934|ref|ZP_06807057.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974827|gb|EFG50531.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 473

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 117/388 (30%), Gaps = 34/388 (8%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + + + +  E  + L+     + +          +H+G+ R  V  DT+     + G++V
Sbjct: 4   IYNTLTNQKEEFKPLVPGSISMYV--CGPTVYNYIHIGNARSTVAFDTVRRYFEYRGFDV 61

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                  D   +I   A       ++ L      + + Y    Y       +     +  
Sbjct: 62  KYVSNFTDVDDKIINRA------NEEGLTPE--QIADKYIEAFYEDTDALNVKRATKNPR 113

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +    +  +  V D        ++  D  A  +  D++     F +         ID+L 
Sbjct: 114 VVENMDDIIQFVAD--------LVDKDF-AYVVDGDVYYRTRKFEKYG-QLSDQNIDDLR 163

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                 E +    +SK     D     L   +         P  +    +    + +A  
Sbjct: 164 AG--ASERLEADSQSKKEDVVDF---ALWKSAKPGEISWTSPWGEGRPGWHIECSVMAT- 217

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                +   + + +    H       E  +A + +               +       KM
Sbjct: 218 -----KLLGDTLDIHAGGHDLTFPHHENEIAQSEAHTGHTFANYWMHNGFVTMGDDDEKM 272

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+F+    ++ +V    VRF +        L F+   +  Q   N +  ++ AYA 
Sbjct: 273 SKSLGNFVLAHDLMKQVDPQVVRFFLASAHYRSPLRFNEENI--QDATNNLNNLKTAYAN 330

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               F  AK    +    L     +  E
Sbjct: 331 LNYRFEDAKAQLDNDAEVLAQIKALENE 358


>gi|227889764|ref|ZP_04007569.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849628|gb|EEJ59714.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 939

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 58/320 (18%)

Query: 215 DKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD    
Sbjct: 428 DKFRDQILAEIEKANFIPTWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPIV 486

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            P  I  +     ++G            + EG           + + D   + F S   G
Sbjct: 487 TPETIEHVAQIFEKEGSNAWYTHTAEELLPEGFKSEHSPNGKFRKETDILDVWFDS---G 543

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 + + DG                  GF   +Y+ GSD   G+       + AV+ 
Sbjct: 544 SSWAGVMQERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVTG 586

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  + 
Sbjct: 587 KAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDVA 643

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +++ ++         +Y + R+  R       D D                  E+
Sbjct: 644 VSQDILRQSAE---------SYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEI 694

Query: 497 QLIVHLAEYPRVIENATIAQ 516
           +L        R+IE A  A 
Sbjct: 695 KL-------NRLIEEAIEAY 707


>gi|218461652|ref|ZP_03501743.1| valyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 281

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D L       G  V  +  
Sbjct: 22  EDAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKNVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                   +   
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RRDMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           + ++  V ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 DAFIDKVWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSKAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y  
Sbjct: 170 YRD 172


>gi|254437287|ref|ZP_05050781.1| glutamyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252733|gb|EDY77047.1| glutamyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 477

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 47/302 (15%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYIND 169
                    +   + +PTG +H+G  R A+     A       L+     +  R     D
Sbjct: 2   PTSNSEAQVVTRFAPSPTGALHIGGARTALFNWLYARGRGGKFLLRIEDTDKARST---D 58

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
              Q     L+        L  +     +      +     + LAD ++ +     +E  
Sbjct: 59  ENTQAILDGLTWL-----GLDWDGEPTSQAAAANRHADVAHRMLADGHAYKCFATQDE-- 111

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +   ++ +    +  +        +  D        H   P  +R     L   G  +  
Sbjct: 112 IEAFRENARANKVSTLYRSPWRDVVDAD--------HPDLPFVVRIKAIGLEHDGQFFAD 163

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +           D  + ++++   ++    D  LL+SDGS TY    LA     ++ G 
Sbjct: 164 FIY----------DEVQGKVVYHPHLLD---DIVLLRSDGSPTYM---LAVVVDDHDMGV 207

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I   G DH G   R + +  A+S K     + +   + L       K+SKR G    
Sbjct: 208 THVIR--GDDHLGNTSRQKMIYDAMSWK-----MPIWAHIPLIFGPDGKKLSKRHGATGA 260

Query: 410 LR 411
             
Sbjct: 261 SE 262


>gi|190890541|ref|YP_001977083.1| isoleucyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190695820|gb|ACE89905.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 968

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL    ++       +  +  F              D+      S  ++T+   D 
Sbjct: 530 VNARILEAFDAEGADAWFAEGAKERFLGNEHDPAKWSQVMDILDVWFDSGSTHTFTLED- 588

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 589 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 640

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 641 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 691

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE  +++     A 
Sbjct: 692 YRKLRNTIRWMLGTLAHDKGEEIALADLPELE-------QLMLHRLAELDQLVRENYDAF 744

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 745 DFKKIARALIDFANVELSAFYFDVRKD 771


>gi|169628693|ref|YP_001702342.1| valyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240660|emb|CAM61688.1| Valyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 879

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 18  DPGAVEAELYQGWVDAGYFTADPSSDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALTRR 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  +                     
Sbjct: 78  KRMQGYEVL-------WLPGMDHAGIATQSVVEKQLAAD--------------------- 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 110 ----GKTKEDFGRELFIEKVWDWKRESG-GTIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   +    D +
Sbjct: 165 RTIFKKLFDAGLIYRAERLVNWSPELKTAISDLE 198



 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 65/204 (31%), Gaps = 34/204 (16%)

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             K    NV L  L+   RD    KMSK  G+ I     V+  G+D++RF  L R  S  
Sbjct: 515 GGKVPFDNVFLHGLI---RDQFGQKMSKSKGNGIDPLDWVEMFGADALRFT-LARGASPG 570

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            D    +   ++  N                 +  +       +      +P  +E   +
Sbjct: 571 GDLSIGEDAARASRN--------------FTTKLFNATRFALMNGAALGELPDVAELTDA 616

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH-GRENPRLRFVQANNR 553
           +  ++  L +    ++ A    E             ++H  W         L  VQ  +R
Sbjct: 617 DRWILGRLEQVRAEVDGALDRYEFSVACE------GLYHFAWDEFCDWYLELAKVQMVDR 670

Query: 554 KLTMMRLQLVHAVASIINSGLNII 577
                      +   ++ + L+ +
Sbjct: 671 ---------AESTRVVLATVLDTL 685


>gi|163787206|ref|ZP_02181653.1| isoleucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877094|gb|EDP71151.1| isoleucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 1134

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   V +  A  NV+   LV    D    KMSKR G+       + 
Sbjct: 642 GVDQTRGWFYTLHAIGTMVFDSVAYKNVVSNGLV---LDKNGQKMSKRLGNATDPFETLS 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + G+D+ R+ M+   N  + L FD   + E S++
Sbjct: 699 KYGADATRWYMIMNANPWDNLKFDSDGIAEVSRK 732


>gi|319897524|ref|YP_004135721.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433030|emb|CBY81401.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 924

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 108/324 (33%), Gaps = 40/324 (12%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +G E        L    + +W+P      ++ M++      I R     + +   +   
Sbjct: 406 FIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPMTLFVHKE 465

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
            ++ H      + ++   + R G                  D+D K+LL         V 
Sbjct: 466 TEELHPRTLELLEEVAKRVERAG-------------IQAWWDLDEKELLGADAETYRKVP 512

Query: 322 RPL-LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
             L +  D   TY ++ +A       +  D  +Y+ GSD   G+      ++ A   K  
Sbjct: 513 DTLDVWFDSGSTY-SSVVANRPEFNGQNID--MYLEGSDQHRGWFMSSLMLSTATDSKAP 569

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              VL         DG   KMSK  G+ +T + V+DE G D +R  +     +  +    
Sbjct: 570 YKQVLTHGF---TVDGQGRKMSKSIGNIVTPQEVMDEFGGDILRLWVASTDYTGEMTVSD 626

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             +K             A    R I   A+ +  +L+     R+++  E         + 
Sbjct: 627 EILKR------------AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVA 674

Query: 500 VHLAEYPRVIENATIAQEPYKLAF 523
             L      I++A    + + +  
Sbjct: 675 CALDAQNE-IKDAYDNYQFHTVVQ 697


>gi|297677638|ref|XP_002816692.1| PREDICTED: valyl-tRNA synthetase, mitochondrial-like isoform 1
           [Pongo abelii]
          Length = 1061

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 53/198 (26%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 168 RWHRMRG---------------------------DQVLWVPGSDHAGIATQAVVEK---- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +A    I + L+AL    D          G   
Sbjct: 197 QLWKERGVRRHELSREAFLREVWQWK-EAKGGEICEQLRALGASLDWDRECFTMDVGSSV 255

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L + G +Y  
Sbjct: 256 AVTEAFVRLYKAGLLYRN 273


>gi|295089976|emb|CBK76083.1| methionyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 661

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 127/418 (30%), Gaps = 69/418 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      GY+V  +   ++ G +I   A   
Sbjct: 12  TTAIAYTSGKP----HIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAAEA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+        EE+   I K    Q  
Sbjct: 68  GVTPKEFVDQVAGEIKT-------IWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQG- 119

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I +   + +     + F +E     G        +     + Y +       +     
Sbjct: 120 -DIYKGYYEGMYCTPCESFFTESQLVDGKCPDCGRPVQPAKEEAYFFRMSKYAQRLIDYI 178

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
               +  Q + R   + ++   P             DL   +  +  G    FD  ++ Y
Sbjct: 179 NEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFTWGIPVSFDPKHVTY 228

Query: 355 VM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---- 394
           V                 G +   + K   A    + +   + + +   +  +  D    
Sbjct: 229 VWLDALTNYITGLGYNCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLP 288

Query: 395 ----GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
               G P       KMSK  G+ +    +VD  G D+VR+ +L            +  + 
Sbjct: 289 KQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMV 348

Query: 444 EQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQESEFDTS 494
           E+   +    +     R  S+  +          +  D+D DL    V+    + D  
Sbjct: 349 ERMNSDLANILGNLVNRTISMTNKYFGGVVEKTGVTEDVDADLKAV-VLEAVKKADEK 405


>gi|256545789|ref|ZP_05473145.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398485|gb|EEU12106.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 646

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 65/419 (15%), Positives = 141/419 (33%), Gaps = 63/419 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+G+   +V+ D L    A  G++       ++ G +I   ALS   + Q+ +  
Sbjct: 15  PNSNLHIGNVYTSVIADVLKRYKALRGFDAYLTTGTDEHGQKIMNAALSHGSKPQEFVDR 74

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--IIRDDL 249
              +             V  +  D      +   + K    VK+       K  I +   
Sbjct: 75  IAGETK-----------VLLKKLDIDYDSFIRSTDPKHEENVKNIFQYLYDKGDIYKGHY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                +  + + +E     G+       +++   + Y +       K K   K   +  +
Sbjct: 124 DGYYCESCESYFTESQLDDGNCPDCGRGVNHRKEESYFFRLSNYTDKLKELFKDHPEFLE 183

Query: 309 LLFRSTM-VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVM----- 356
             FR    + + +D+ L            DL+  +  ++ G D      +++YV      
Sbjct: 184 PKFRQNEMLNNFIDKGL-----------EDLSVSRNTFDWGVDVPFDNEHVVYVWIDALS 232

Query: 357 --------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-------------- 394
                   G D   + K   A    + +   + + ++   + +  D              
Sbjct: 233 CYLTAIGYGYDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPKKVFAHGWIL 292

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ +    +V+  G+DS+++ +L   N     +F   K  ++   + V  
Sbjct: 293 FDNDKMSKSKGNIMYPEPLVELYGTDSLKYFLLREFNFGADGNFLSKKFMDRYNSDLVND 352

Query: 454 VQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +    +R  S+  +  D  I   L+ D     +I    +      +L+    ++   +E
Sbjct: 353 LGNLLSRTVSMISKYNDGIIKKGLEEDEIDGELIALAEKTYEDFTKLMDE-FKFNEALE 410


>gi|254443440|ref|ZP_05056916.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257748|gb|EDY82056.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 512

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 119/362 (32%), Gaps = 58/362 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I++ + +P    H+GH    V+ D +A      G EV     I++ G ++   A   
Sbjct: 7   TTAIDYANGSP----HLGHAYEKVLTDVVARFRRLMGDEVYFLTGIDEHGQKVQQSAAKR 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                +          E             E  +  + + +   E +   +V+       
Sbjct: 63  GIEPIELCDEAAGQFQELC-----------ESLEISNDDFIRTTETRHKDVVRSILQDLF 111

Query: 242 M--KIIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +I + + K     + + F+ E D   G    I   ++ +    Y ++          
Sbjct: 112 DRGEIYKAEYKGFYSARAEQFLQEKDMVDGKWPEIFGEVNEITESNYFFKLSKYQDWLVE 171

Query: 299 TQKCDMDRKQLLFRSTMVGD-------------DVDR-----PLLKSDGSYTYFAAD--- 337
             K   D     FR+  V +               +R     PL   +   TY   D   
Sbjct: 172 HIKTHEDFIFPRFRAKQVLEFLKEPINDLCISRPKERLEWGIPLPFDEEYVTYVWFDALV 231

Query: 338 -----LAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                + Y    +E+ +    +V+G D     H+ Y      +  A+      I +    
Sbjct: 232 NYISAIGYGTPDFEKYWPVNYHVIGKDILVPPHAVY---WPIMLKAIG-----IEIPSSL 283

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           LV  +      KMSK  G+FI     V E   D++R+ ++ R+ S   D DF      ++
Sbjct: 284 LVHGWWSINGEKMSKSTGNFIEPSEFVKEYSVDALRYFLI-REMSVGQDSDFSDELFTNR 342

Query: 448 EN 449
            N
Sbjct: 343 YN 344


>gi|195333986|ref|XP_002033667.1| GM21449 [Drosophila sechellia]
 gi|194125637|gb|EDW47680.1| GM21449 [Drosophila sechellia]
          Length = 1049

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 58/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S       +                K  +     N TG +H+GH     +
Sbjct: 95  SPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPNGKFVMIIPPPNVTGSLHLGHALTNAI 154

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 155 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 196

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I + LK+L   +D         
Sbjct: 197 -------------SRHDLGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWSRVAFTMD 242

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 243 PKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 281


>gi|163745430|ref|ZP_02152790.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161382248|gb|EDQ06657.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 848

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +    G+        K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  ARWQQAWEKDGVFQAVRNADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKIATG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|158335466|ref|YP_001516638.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305707|gb|ABW27324.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 532

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 105/323 (32%), Gaps = 43/323 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G     +  D +A      G+EV      ++ G +I   A     +  Q   +     
Sbjct: 23  HIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRTAEQ-RGKAPQDHCDEIVAG 81

Query: 197 PEGYYPGVYLKH--VGKELADKYSSELLNFPEEKWLP-IVKDYSVQAM----MKIIRDDL 249
            +  +  + +++    +  + ++   +  F +  W    +     Q       +  +++ 
Sbjct: 82  YKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQGHQQGWYCVGCEEFKEER 141

Query: 250 KALNIQHD-------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             L   H         +  E ++         D++   A Q       + P   +     
Sbjct: 142 DLLEDNHCPIHKRPVEWRDEQNYFFRLSKYQDDLLQLFADQ----PDFIQPTSRRNEVLS 197

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--LAYFKCKYERGFDNMIY------ 354
            ++R    F  + V  D   P+   D    Y   D  L Y     +   +  +       
Sbjct: 198 FVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTALLDEDTEPTLDQALSQW 257

Query: 355 ------VMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                 ++G D    + R  AV   A  +S      + +      L +DG   KM K  G
Sbjct: 258 WPINLHLIGKD----ILRFHAVYWPAMLMSADLPLPDRVFGHGF-LTKDGQ--KMGKSLG 310

Query: 406 DFITLRHVVDEVGSDSVRFMMLW 428
           + +    +VD  G+D+VR+  L 
Sbjct: 311 NTLDPVELVDRYGTDAVRYYFLK 333


>gi|154354346|gb|ABS76260.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5318]
          Length = 130

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSV 81
           KVE     +I + + R+       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KVEILANKKIPLSKGRNSNKVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  QIVPPGWIHLGLTHPVLASWLQRLVE 115


>gi|116328522|ref|YP_798242.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331250|ref|YP_800968.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281004|sp|Q04SB0|SYC_LEPBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122283690|sp|Q050D6|SYC_LEPBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116121266|gb|ABJ79309.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124939|gb|ABJ76210.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 474

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 116/342 (33%), Gaps = 42/342 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +  +       +V +           H+G+ R  +  D L   +   GY V     I D 
Sbjct: 13  KKEKFSPANPHRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYGVDMTMNITDI 72

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   +++     Q+          E       LK V  E  + Y     + PE   +
Sbjct: 73  DDKIIRDSIASQKSIQEFTTPWTEAFFED------LKTVSAEFLEHYPKATESIPE--MI 124

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            I++    Q ++    ++L         + S   F       +  I  +  + G  Y+  
Sbjct: 125 QIIQRLQNQGLVYEKDENL---------YFSIQKFE--GYGKLSKIDTSGMKTGTRYD-- 171

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                +    K D+    L       G+   +  + + G   +     A  +  Y  G D
Sbjct: 172 -----TDEYDKEDVRDFVLWKSPKRKGEASWKTSVGT-GRPGWHLECSAMIRKIYGSGVD 225

Query: 351 NMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             I+  G D     H   + + E      S  +  ++        L  +G   KMSK  G
Sbjct: 226 --IHTGGVDLLFPHHENEIAQSEGAFPEESFVRTWLHSEH-----LLVEGQ--KMSKSKG 276

Query: 406 DFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           +F TLR +V + +   ++RF+++       L+F   ++ E S
Sbjct: 277 NFYTLRDLVGQGLDPKAIRFLLISAHYRSKLNFSTDRIAEAS 318


>gi|13476816|ref|NP_108385.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14027577|dbj|BAB53846.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 1003

 Score = 44.5 bits (104), Expect = 0.054,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 117/331 (35%), Gaps = 40/331 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPIR 274
             L    + +++P      ++AM++   D +    +A  +   +F  ED     D +  +
Sbjct: 504 RALKAIDDTRFVPAAGQNRIRAMIEERPDWVLSRQRAWGVPIAVFADEDGNVLKDEAVNQ 563

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            I+D    +G          K +     D  + + +     V  D         GS   F
Sbjct: 564 RIMDAFEEEG-ADAWFAAGAKERFLGNHDASKWKQVMDILDVWFDS--------GSTHVF 614

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLY 392
                  + + +  +   +Y+ GSD   G+      +  +   + +A  + ++     + 
Sbjct: 615 T-----LEDRPDLKWPADVYLEGSDQHRGWFHSS--LLESCGTRGRAPYDTVVTHGFTMD 667

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ +  + V+ + G+D +R  ++    +     D    K   + N   
Sbjct: 668 EDGR--KMSKSLGNTVVPQDVIKQSGADILRLWVV----TTDYWEDQRLGKNVLQTNID- 720

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY + R+  R         D +  P   +P+       E  ++  LAE   V+   
Sbjct: 721 ----AYRKLRNTIRWMLGTLAHDDGETVPLEAMPEL------ERLMLHRLAELDEVVRQG 770

Query: 513 TIAQEPYKLAFYLYD-LASVFHGHWSHGREN 542
             A E  ++   L D +       +   R++
Sbjct: 771 YDAFEFKRITRALVDFMVVELSAFYFDIRKD 801


>gi|260578308|ref|ZP_05846224.1| valine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603610|gb|EEW16871.1| valine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 932

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + + L    V    +  +        +I     N TG +H+GH     + D +A  
Sbjct: 39  DPAAVEENLYQGWVDSGYFKADPSSDKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARR 98

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T                                V   L
Sbjct: 99  KRMQGFEVLWLPGSDHAGIATQT-------------------------------KVEANL 127

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +    +  ++  + ++  V ++  Q    +I+  ++A+    D          G    +
Sbjct: 128 KETEGKDRFDYGRDAFVGKVWEWKDQYG-GVIQRQMRAIGDSVDWSRERFTLDDGLSRAV 186

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L   G +Y        S   Q    D
Sbjct: 187 QTMFKELFDAGLIYRANRMVNWSPVLQTAISD 218


>gi|283797633|ref|ZP_06346786.1| methionine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074744|gb|EFE12108.1| methionine--tRNA ligase [Clostridium sp. M62/1]
          Length = 661

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 127/418 (30%), Gaps = 69/418 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      GY+V  +   ++ G +I   A   
Sbjct: 12  TTAIAYTSGKP----HIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAAEA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+        EE+   I K    Q  
Sbjct: 68  GVTPKEFVDQVAGEIKT-------IWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQG- 119

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             I +   + +     + F +E     G        +     + Y +       +     
Sbjct: 120 -DIYKGYYEGMYCTPCESFFTESQLVDGKCPDCGRPVQPAKEEAYFFRMSKYAQRLIDYI 178

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIY 354
               +  Q + R   + ++   P             DL   +  +  G    FD  ++ Y
Sbjct: 179 NEHPEFIQPVSRKNEMMNNFLLP----------GLQDLCVSRTSFTWGIPVSFDPKHVTY 228

Query: 355 VM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---- 394
           V                 G +   + K   A    + +   + + +   +  +  D    
Sbjct: 229 VWLDALTNYITGLGYNCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLP 288

Query: 395 ----GMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVK 443
               G P       KMSK  G+ +    +VD  G D+VR+ +L            +  + 
Sbjct: 289 KQVFGHPWLLQGDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMV 348

Query: 444 EQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQESEFDTS 494
           E+   +    +     R  S+  +          +  D+D DL    V+    + D  
Sbjct: 349 ERMNSDLANILGNLVNRTISMTNKYFGGVVEKTGVTEDVDADLKAV-VLEAVKKADEK 405


>gi|217033844|ref|ZP_03439269.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
 gi|216943742|gb|EEC23185.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|198275943|ref|ZP_03208474.1| hypothetical protein BACPLE_02126 [Bacteroides plebeius DSM 17135]
 gi|198271572|gb|EDY95842.1| hypothetical protein BACPLE_02126 [Bacteroides plebeius DSM 17135]
          Length = 1162

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 KFGSDPLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|188528338|ref|YP_001911025.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144578|gb|ACD48995.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 806

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|153009373|ref|YP_001370588.1| glutamyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|229470581|sp|A6X0K5|SYE1_OCHA4 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|151561261|gb|ABS14759.1| glutamyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 473

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 102/304 (33%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A     SG ++       D     +    ++
Sbjct: 3   KPVVTRFAPSPTGYLHIGGARTALFNWLYA---KHSGGKMLLRIEDTDRERSTDAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D D    +      + V +EL          +   + L  +++ + +  
Sbjct: 60  LDGLTWLGLDWDGDAISQFERAPRHREVAEELVA-LGKAYYCYATPEELAEMREKAREEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPQEGETLV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 QDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTVIYDAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|260753979|ref|YP_003226872.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553342|gb|ACV76288.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 846

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       SG  + ++   +     +E     P+G +H+GH R   +GD LA      G+
Sbjct: 18  RWQKKWEESGCFHAKDNSDRPHSYILEMF-PYPSGRIHMGHVRNYTMGDVLARYYRMKGH 76

Query: 160 EV 161
           EV
Sbjct: 77  EV 78



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           K +  + L E       G   KMSK   + +    ++D+ G+D+VR+ ML     E
Sbjct: 600 KDEAGIFLTESGEKVTVGRVEKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPE 655


>gi|242063848|ref|XP_002453213.1| hypothetical protein SORBIDRAFT_04g001710 [Sorghum bicolor]
 gi|241933044|gb|EES06189.1| hypothetical protein SORBIDRAFT_04g001710 [Sorghum bicolor]
          Length = 571

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 88/286 (30%), Gaps = 46/286 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G          D          +V       
Sbjct: 60  APSPTGNLHVGGARTALFNYLFAR---SKGGRFVLRVEDTDLERSTRKSEEAVLADLAWL 116

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y +     L  +Y+ +LL+        + + +     ++ +++ 
Sbjct: 117 GLEWDEGPDVGGEFGPYRQSERNSLYKQYAEKLLDSG-----AVYRCFCSNEELEQMKEV 171

Query: 249 LKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            K      +    + S  D            +     +G  Y      PK  + +  D+ 
Sbjct: 172 AKQRQLPPVYMGKWASASDVE----------VQQELEKGTPYTYRFRVPKEGSLKINDLI 221

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYV 364
           R ++ +    +GD     +++S+G   Y                +  + V  +     +V
Sbjct: 222 RGEVSWNLDTLGDF---VIMRSNGQPVY----------------NFCVTVDDATMQISHV 262

Query: 365 KRLEAVA-----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R E         A+  K    ++     V L       K+SKR G
Sbjct: 263 IRAEEHLPNTLRQALIYKALGFSMPSFAHVSLILAPDRSKLSKRHG 308


>gi|237718768|ref|ZP_04549249.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229451900|gb|EEO57691.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 505

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGEQGPYRQSERREIYKKYVQILLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DIHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|254437047|ref|ZP_05050541.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252493|gb|EDY76807.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 481

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 106/318 (33%), Gaps = 35/318 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +V DTL  L+  + Y      Y+ +     + +  + F R Q        DL
Sbjct: 38  HLGNARPVIVFDTLFRLLRHT-YGADHVTYVRNFTDVDDKINATAFARQQAGAAGTLEDL 96

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +     E    Y  ++      +   + +     A M  + +DL A    +
Sbjct: 97  ---------IAERSSETIGWYLEDMAAVGALEPSAMPRATQYIAQMITMIEDLIAKGHAY 147

Query: 257 D----IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
           +           +        R + D +A                   K D     L   
Sbjct: 148 EAEGHALFRVRSYTEYGALSGRSVDDMIA----------GARVEVAPYKEDPMDFVLWKP 197

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVA 371
           S+ V    D P  +  G   +     A         FD  I+  G+D    + +   A +
Sbjct: 198 SSDVQPGWDSPWGR--GRPGWHIECSAMALDLLGGEFD--IHGGGNDLQFPHHENEIAQS 253

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRK 430
                  A + +    L    R     KMSK  G+F T+R ++++ V  + +RF+ML   
Sbjct: 254 TCAGHGFANVWMHNEMLQVEGR-----KMSKSLGNFFTVRDLLEQGVPGEVIRFVMLSTH 308

Query: 431 NSELLDFDFCKVKEQSKE 448
             + +D+   KV+   K 
Sbjct: 309 YRKPMDWTAAKVQFAEKT 326


>gi|220915135|ref|YP_002490439.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219952989|gb|ACL63373.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 946

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 17/169 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A+        VL    +          MSK AG+ I   
Sbjct: 592 LYLEGSDQHRGWFHSSLLTSMALRGAAPYRAVLTHGFILDQHGKA---MSKSAGNGIEPS 648

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R  +      + +     ++     E         Y + R+  R A   
Sbjct: 649 EIIKKYGADILRLWVSASDYRDDIGLG-DQILAGLAEG--------YRKIRNTIRYALGA 699

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
               D     R+ +P+          L   LA +   +  A    E + 
Sbjct: 700 LDGFD---PARDAVPEAELEPIDRWALAR-LAAWDEKVAKAYEDYEFHL 744


>gi|160883090|ref|ZP_02064093.1| hypothetical protein BACOVA_01058 [Bacteroides ovatus ATCC 8483]
 gi|156111562|gb|EDO13307.1| hypothetical protein BACOVA_01058 [Bacteroides ovatus ATCC 8483]
          Length = 505

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGEQGPYRQSERREIYKKYVQILLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DIHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|94496457|ref|ZP_01303034.1| glutamyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424203|gb|EAT09227.1| glutamyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 502

 Score = 44.5 bits (104), Expect = 0.055,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 38/319 (11%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
               +    +         +K  +   + +PTG +H+G  R A+     A      G + 
Sbjct: 7   FMDQIRRMSKNMTASATGKSKQVVTRFAPSPTGYLHIGGARTALFNWLFAR---HHGGKF 63

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSSE 220
                  D          ++F          D      +        V  +L A  ++ +
Sbjct: 64  LLRIEDTDRARSTEAAVAAIFDGLDWLGLGGDEPAVFQFERTPRHAEVAAQLLAAGHAYK 123

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
               PEE          +  + +  R     L +++D                RD     
Sbjct: 124 CFATPEE----------LAELREQQRA--AKLPMRYD-------------GRWRDRDPGE 158

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A +G  Y   +  P+   T   D  + +++ ++  +    D  LL+SDG+ TY    LA 
Sbjct: 159 APEGAPYVIRIKAPREGETVVEDAVQGRVVVQNAELD---DMILLRSDGTPTYM---LAV 212

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                + G  ++I   G DH     R   +  A+++ +   +  +   + L       K+
Sbjct: 213 VVDDRDMGVTHVIR--GDDHLNNAFRQLTIIKAMAQIETGWDEPVYAHIPLIHGSDGAKL 270

Query: 401 SKRAGDFITLRHVVDEVGS 419
           SKR G  + +    DE+G 
Sbjct: 271 SKRHG-ALGVDAYRDEMGM 288


>gi|326693554|ref|ZP_08230559.1| methionyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 702

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 66/348 (18%), Positives = 110/348 (31%), Gaps = 76/348 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVT----------------------REYYIND 169
           P+G + +G+    V+ D  A      G +V                          Y++ 
Sbjct: 48  PSGKLQLGNTYTTVLADAAARYHRLLGEDVFFLTGTDEHGLKIQQKAKAAGVSEIAYLDG 107

Query: 170 AGAQI-----------NTLALSVFWRYQQALYNNDSDLPE--GYYPGVYL---------K 207
              QI           +    +   R+++A+    + L E    Y G Y           
Sbjct: 108 MAEQIKALWQLMDISYDDFIRTTEPRHEKAVQKIFTTLLEKGDIYKGEYEGWYSVSDEEY 167

Query: 208 HVGKELADKYSSELLN-----FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS- 261
               +LA+ Y  E         P    + +VK+ +    M    D L      H  FI  
Sbjct: 168 FTESQLAEVYRDENGQVTGGKAPSGHEVELVKEEAYFFKMSKYADWLLDYYKTHPEFIQP 227

Query: 262 EDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           E   +    + I   +++LA  +  V  GI  P   K      +D   L    T +G D 
Sbjct: 228 EARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID--ALSNYITALGYDT 285

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D   L  D  +      +     ++       IY               +  A+     +
Sbjct: 286 DDTALF-DKLWPANVQLVGKEIVRFHT-----IY------------WPIMLHALGIDLPK 327

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             +    LV   +DG   KMSK  G+ I    + +  G D+VR+ +L 
Sbjct: 328 TIIGHGWLVM--KDG---KMSKSKGNVIYPEVLEERYGLDAVRYYLLR 370


>gi|324995927|gb|EGC27838.1| glutamate--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 485

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E  F           I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINE--FLGMSEDEKAAYIAEREAAGIIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|293372143|ref|ZP_06618534.1| glutamate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|299144647|ref|ZP_07037715.1| glutamate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|292632935|gb|EFF51522.1| glutamate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298515138|gb|EFI39019.1| glutamate--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 505

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGEQGPYRQSERREIYKKYVQILLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DIHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|254563518|ref|YP_003070613.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254270796|emb|CAX26801.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 522

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 115/406 (28%), Gaps = 46/406 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G +I   A       +  + +
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQTASRAGVTPRAFVDD 79

Query: 192 NDSDLPEGYYPGV--YLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIR 246
                          Y + +    AD Y++             + + K     ++     
Sbjct: 80  MAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAGWYSVRDEAY 139

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            D     +  D             ++ E+++          ++   A Q       L P 
Sbjct: 140 YDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLYAEQ----PDFLGPE 195

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--- 351
                    +         +    D   P+    G   Y   D A        GF +   
Sbjct: 196 TRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVD-ALTNYLTVTGFPDAKA 254

Query: 352 --------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                    ++++G D    + R  AV   A  +S        +      L R     KM
Sbjct: 255 PNARFWPASLHIIGKD----IVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG---EKM 307

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQ-YAY 458
           SK  G+ +    +V   G D VR+ +L         ++D   +  +   +    +   A 
Sbjct: 308 SKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHDAIINRINADLANDLGNLAQ 367

Query: 459 ARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLA 503
                I +  +   P+   F      ++            L+ +LA
Sbjct: 368 RSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLA 413


>gi|241762545|ref|ZP_04760620.1| glutamyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241372873|gb|EER62560.1| glutamyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 481

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 91/282 (32%), Gaps = 40/282 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A                   G Q     L +  
Sbjct: 11  VVTRFAPSPTGFLHIGGARTALFNWLFAR----------------HNGGQFQ---LRIED 51

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +        D        + L   G        +       E+ L   K Y   A   
Sbjct: 52  TDRVRSTKEAIDAIIDGMRWLGLDWDGDITYQFERAPRHAEVAEELLKAGKAYKCFATA- 110

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              ++L+++  +  +      +        RD   + A  G  Y   L   +   T   D
Sbjct: 111 ---EELESMRAEQRVKKQPQRY----DGRWRDRDPSEAPAGAPYVVRLKAEQEGETTLHD 163

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + +  +  ++  +    D  LL+SDG+ TY    LA     ++ G +++I   G DH   
Sbjct: 164 LVQGDVTVKNAELD---DMILLRSDGTPTYM---LAVVVDDHDMGVNHVIR--GDDHLNN 215

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             R   +  A++    Q        + L       K+SKR G
Sbjct: 216 TFRQLGIIRAMNWDAPQ-----YAHIPLIHGADGAKLSKRHG 252


>gi|153840104|ref|ZP_01992771.1| valyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746289|gb|EDM57361.1| valyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 957

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|86156442|ref|YP_463227.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85772953|gb|ABC79790.1| Isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 946

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 17/169 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A+        VL    +          MSK AG+ I   
Sbjct: 592 LYLEGSDQHRGWFHSSLLTSMALRGAAPYRAVLTHGFILDQHGKA---MSKSAGNGIEPS 648

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R  +      + +     ++     E         Y + R+  R A   
Sbjct: 649 EIIKKYGADILRLWVSASDYRDDIGLG-DQILAGLAEG--------YRKIRNTIRYALGA 699

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
               D     R+ +P+          L   LA +   +  A    E + 
Sbjct: 700 LDGFD---PARDAVPEAELEPIDRWALAR-LAAWDEKVAKAYEDYEFHL 744


>gi|75676035|ref|YP_318456.1| glutamyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74420905|gb|ABA05104.1| glutamyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 496

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 95/305 (31%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T   +   + +PTG +H+G  R A+     A      G  +       D          +
Sbjct: 24  TTPVVTRFAPSPTGFLHIGGGRTALFNWLYAR---KHGGRMLLRIEDTDRARSTPEAIDA 80

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +      D D+   +      + + ++L  +       +   + L  +++ +   
Sbjct: 81  ILDGLKWLGIEWDDDVVYQFSRVARHREIAEQLLAE-GKAYRCYATTEELSEMREKARAE 139

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               + D         D   SE       P  ++  I  L            P   +T  
Sbjct: 140 GRAKLYD-----GRWRDRDASEA------PQGVKPTI-RLKA----------PLTGETVI 177

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  + +     +     D  LL+ DG+ TY    LA     ++ G  ++I   G DH
Sbjct: 178 EDQVQGRIVWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHIIR--GDDH 228

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R + +   +      +       + L       K+SKR G           +G D
Sbjct: 229 LINAARQKQIYDTLGWALPTMAH-----IPLIHGPDGSKLSKRHG----------ALGVD 273

Query: 421 SVRFM 425
           + R M
Sbjct: 274 AYRAM 278


>gi|84029519|sp|Q74JX6|SYI_LACJO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 928

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 58/320 (18%)

Query: 215 DKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD    
Sbjct: 417 DKFRDQILAEIEKANFIPAWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPIV 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            P  I  +     ++G            + EG           + + D   + F S   G
Sbjct: 476 TPETIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDS---G 532

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 + + DG                  GF   +Y+ GSD   G+       + AV+ 
Sbjct: 533 SSWAGVMQERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVTG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  + 
Sbjct: 576 KAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDVA 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +++ ++         +Y + R+  R       D D                  E+
Sbjct: 633 VSQDILRQSAE---------SYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEI 683

Query: 497 QLIVHLAEYPRVIENATIAQ 516
           +L        R+IE A  A 
Sbjct: 684 KL-------NRLIEEAIEAY 696


>gi|71277791|ref|YP_267925.1| isoleucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|84029510|sp|Q486U0|SYI_COLP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71143531|gb|AAZ24004.1| isoleucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 953

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 20/197 (10%)

Query: 344 KYERGFDNM--IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K    FD +  +Y+ GSD   G+       + A++       VL    V    D    KM
Sbjct: 551 KARDEFDGIADLYLEGSDQHRGWFMSSMISSVAMNGAAPYKQVLTHGFVV---DAKGHKM 607

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ IT + + + +G+D +R        ++ +       K Q+          AY R
Sbjct: 608 SKSLGNVITPKEITNNLGADILRLWTASVNYTQEITAGDEIFKRQAD---------AYRR 658

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  R         +    P N +    +    +  +I   A     I NA    E + 
Sbjct: 659 IRNTSRFLLSNLTGFE----PANHMVAVEDMVALDRWVIDKAARLQEEIINAYDEYEFHV 714

Query: 521 LAFYLYDLA-SVFHGHW 536
           +   L +   +   G +
Sbjct: 715 VVHKLMNFCTNELGGFY 731


>gi|15892889|ref|NP_360603.1| glutamyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|20140110|sp|Q92H06|SYE2_RICCN RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|15620078|gb|AAL03504.1| glutamyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 513

 Score = 44.5 bits (104), Expect = 0.056,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 95/286 (33%), Gaps = 46/286 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I   + +PTG +H+G  R A+     A              + N          L + 
Sbjct: 4   NVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLRIE 44

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQ 239
              ++          E  + G+    +       + S+  N  +E  L ++   K Y   
Sbjct: 45  DTDKERSTKEAV---EAIFSGLKWLGLDWNGEVIFQSKRNNLYKEAALKLLQNGKAYYCF 101

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              + I    +        FI   ++   DPS     I  + R        L  P+  + 
Sbjct: 102 TRQEEIERQRQQALENKQHFIFNSEWRDKDPSIYPTDIKPVIR--------LKTPREGSI 153

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G D
Sbjct: 154 TIHDTLQGEVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GDD 205

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R  A+  A       +       + L       K+SKR G
Sbjct: 206 HLTNTARQLAIYQAFGYAVPSMTH-----IPLIHGADGAKLSKRHG 246


>gi|329667549|gb|AEB93497.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 928

 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 58/320 (18%)

Query: 215 DKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD    
Sbjct: 417 DKFRDQILAEIEKANFIPAWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPIV 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            P  I  +     ++G            + EG           + + D   + F S   G
Sbjct: 476 TPETIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDS---G 532

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 + + DG                  GF   +Y+ GSD   G+       + AV+ 
Sbjct: 533 SSWAGVMQERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVTG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  + 
Sbjct: 576 KAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDVA 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +++ ++         +Y + R+  R       D D                  E+
Sbjct: 633 VSQDILRQSAE---------SYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEI 683

Query: 497 QLIVHLAEYPRVIENATIAQ 516
           +L        R+IE A  A 
Sbjct: 684 KL-------NRLIEEAIEAY 696


>gi|325996820|gb|ADZ52225.1| Leucyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998412|gb|ADZ50620.1| Leucyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|312864508|ref|ZP_07724739.1| methionine--tRNA ligase [Streptococcus downei F0415]
 gi|311099635|gb|EFQ57848.1| methionine--tRNA ligase [Streptococcus downei F0415]
          Length = 669

 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 114/354 (32%), Gaps = 83/354 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       Y+V     +++ G +I   A  V          
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRMMNYDVRYLTGLDEHGQKIQQKAQEV---------- 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  + K++ + +  ELLN   ++++    D+  + + KI     + 
Sbjct: 65  -------GITPQEYVDGMAKDVKELW--ELLNISYDQFIRTTDDFHEEVVAKI----FEK 111

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT----QKCDMDRK 307
           L  Q DI++ E   + G  S   +     ++   VY                +   +  +
Sbjct: 112 LLAQGDIYLGE---YTGWYSVSDEEFFTESQLAEVYRDDHGNMIGGVAPSGHEVEKVSEE 168

Query: 308 QLLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERGFD--- 350
              FR +   D            ++ DG               DLA  +  Y  G     
Sbjct: 169 SYFFRMSKYADRLIAYYKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGIKVPS 228

Query: 351 ---NMIYVM-----------GSDHSGYVK--------RLEAVAAAVSEKKAQINVLLCEL 388
              ++IYV            G     +          +   +   + +   + + +   +
Sbjct: 229 NPKHVIYVWIDALMNYITALGYGQEDHANFDKFWHNDQDHEIIHMIGKDILRFHSIYWPI 288

Query: 389 VRLYRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           + +  D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 289 MLMALDLPLPTRLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 342


>gi|308062430|gb|ADO04318.1| valyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 872

 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 98/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  + +             G  V  PL+          ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLIN---RTIPIIADLH 265

Query: 339 -----AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H          A  + ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              RD +  K+ + A
Sbjct: 319 LEARDKVVEKLKENA 333


>gi|28899420|ref|NP_799025.1| valyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363411|ref|ZP_05776263.1| valine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879345|ref|ZP_05891700.1| valine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895696|ref|ZP_05904192.1| valine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900268|ref|ZP_05908663.1| valine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726883|sp|Q87LG6|SYV_VIBPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28807656|dbj|BAC60909.1| valyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087423|gb|EFO37118.1| valine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093160|gb|EFO42855.1| valine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308107519|gb|EFO45059.1| valine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111205|gb|EFO48745.1| valine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 952

 Score = 44.1 bits (103), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|323451382|gb|EGB07259.1| hypothetical protein AURANDRAFT_64933 [Aureococcus anophagefferens]
          Length = 859

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +     +     L+ + + L  DG   KMSK  G+
Sbjct: 585 LYVGGAEHAVLHLLYARFWHKVLYDIGATTHEEPFAKLVHQGLILGSDGE--KMSKSRGN 642

Query: 407 FITLRHVVDEVGSDSVR 423
            +    V+ E G+D++R
Sbjct: 643 VVNPDEVIGEHGADALR 659


>gi|319953837|ref|YP_004165104.1| valyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422497|gb|ADV49606.1| Valyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 876

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 66/238 (27%), Gaps = 35/238 (14%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
                 + +G  Y  +   +     I     N TG +H+GH     + D L       G 
Sbjct: 15  HWYEYWMSNG--YFHSTPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLMGK 72

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                 ++                        + + +         LK  G + AD    
Sbjct: 73  NAC---WV---------------------PGTDHASIATEAKVVAKLKEQGIDKAD---- 104

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                  E++L    D+       +I + LK L    D   ++        + +  +  +
Sbjct: 105 ----LTREEFLKHAWDW-TDEYGGVILEQLKKLGCSCDWDRTKFTLDDNMSASVIKVFVD 159

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           L  +G +Y G          Q    D + +      +   ++  +  SD   T     
Sbjct: 160 LFEKGLIYRGFRMVNWDPEAQTTLSDEEVIHEEKQGLLYYLEYQIEGSDEKVTIATTR 217


>gi|317182768|dbj|BAJ60552.1| leucyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|317181247|dbj|BAJ59033.1| leucyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|307638226|gb|ADN80676.1| Leucyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|297380718|gb|ADI35605.1| leucyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|227485589|ref|ZP_03915905.1| glutamate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236455|gb|EEI86470.1| glutamate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 503

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 101/296 (34%), Gaps = 35/296 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       L+     + TR +        +  L  S  
Sbjct: 19  APSPTGYLHIGGLRTALFNYLYARHTGGKMLLRIEDTDRTR-FVEGALENLLKALKWSGV 77

Query: 183 WRYQQALYNNDSDLPEGYYPGVYL--KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  + + +  + E    G Y+  + V   + DKY  +L+   +  +        V  
Sbjct: 78  EIDEGVMLDENGHVTEKGDCGPYIQSERVKAGIYDKYIDQLIEEGK-AYYCFCSQERVDK 136

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +   +R D   L  ++D              P+ +        G  +   L  PK     
Sbjct: 137 VRDQMRAD--GLTPKYDGLCR--------SIPLEEAKQR-VANGEEHTVRLKLPKDYDIS 185

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + ++ F +    D  D+ L+K DG  TY     A     +  G  ++  V G + 
Sbjct: 186 FNDRIKGKITFNTD---DQDDQVLIKRDGYPTYHF---AVVVDDHLMGITHV--VRGDEW 237

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                +   +  A   +  +        +    +    K SKR GD + +   ++E
Sbjct: 238 ISSTPKHVYLYEAFGWQAPEYIH-----LPTVLNKDHKKYSKRNGDGM-VEDFIEE 287


>gi|217031694|ref|ZP_03437198.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
 gi|216946541|gb|EEC25141.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
          Length = 306

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257998|gb|EDS71964.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
           17244]
          Length = 468

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 75/432 (17%), Positives = 130/432 (30%), Gaps = 118/432 (27%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
            H+G+ R  ++ DTL   + + GY+V    Y+ +       +   +  + ++    + + 
Sbjct: 35  FHIGNARPFIIFDTLRRYLEYKGYKV---NYVQN----FTDIDDKIINKAKEEHTTSKA- 86

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                            +ADKY  E                           D K L I+
Sbjct: 87  -----------------VADKYIKEYFT------------------------DAKGLGIK 105

Query: 256 HDIFISEDDFHRGDPSPIRDIID---NLARQGYVY--EGILPPPKSKTTQKCDMDRK--- 307
                 E   H      I DIID   +L + GY Y  +G +    SK      + +K   
Sbjct: 106 ------EATVHPRVSECIGDIIDLISDLEKNGYAYNVDGNVYYRVSKFKDYGKLSKKPID 159

Query: 308 -----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---------- 352
                  +  +      +D  L K     +  A D  + K +     +            
Sbjct: 160 ELISGARVEVNDEKESPLDFALWKKQKEDSEIAFDSPWGKGRPGWHIECSAMSRKYLGST 219

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           I + G          E   A  SE     + +   +   Y +    KMSK  G+F  +R 
Sbjct: 220 IDIHGGGEDLIFPHHENEIAQ-SEGANGKDFVHYFVHNGYININNEKMSKSKGNFFMVRD 278

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQ 467
           +  +   + VR  ML       ++F F  +K+         N    + Y       +  +
Sbjct: 279 ISKDFDLEVVRLFMLSAHYKTPVNFSFDILKQTQSGLNRLYNTKENLLY-------LLDK 331

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLA 522
           AKD                   +    E + I  L +Y    +NA             + 
Sbjct: 332 AKD------------------KDLKEDEKEFINSLPKYREEFKNAMEDDINTANAVSTI- 372

Query: 523 FYLYDLASVFHG 534
              YDL+   + 
Sbjct: 373 ---YDLSKDINS 381


>gi|190410974|sp|Q5TM74|SYVM_MACMU RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
          Length = 1064

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 53/198 (26%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 168 RWHRMRG---------------------------DQVLWVPGSDHAGIATQAVVEK---- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +A    I + L+AL    D          G   
Sbjct: 197 QLWKEQGVRRHELSREAFLREVWQWK-EAKGGEICEQLRALGASLDWDRECFTMDVGSSV 255

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L + G +Y  
Sbjct: 256 AVTEAFVRLYKAGLLYRN 273


>gi|108563921|ref|YP_628237.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373647|sp|Q1CR59|SYL_HELPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|107837694|gb|ABF85563.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|257460697|ref|ZP_05625798.1| glutamyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442028|gb|EEV17170.1| glutamyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 438

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 107/345 (31%), Gaps = 68/345 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+  + + SL   SG+       I D                 + 
Sbjct: 5   APSPTGDMHIGNLRAAIF-NYICSLQDKSGF----ILRIEDTDT--ARNIEGKDQEIIEI 57

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           L          YY    LK   +  A           F  E+ L   K  +  A      
Sbjct: 58  LKRFGISWQSLYYQSKNLKFHQQFAAKLLSEKKAFCCFCSEEELEAKKQAAKDAGEAY-- 115

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                 +   +    E+  + G P  IR     L +  +  E           +  ++D 
Sbjct: 116 ----RYDGHCEHLSDEEVLNCGKPFTIR-----LKKPDHALEFTDAIKGRIAFEPQNIDS 166

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
                            ++++D + TY   + A       +G   +I   G DH     +
Sbjct: 167 ---------------FVIMRADKTPTY---NFACACDDMMQGVSFVIR--GEDHVSNTPK 206

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------------ 414
              +  ++     +I      ++    +    KMSKR  D  +++ ++            
Sbjct: 207 QNWIRQSLGYD-GEIKYAHLPII---LNSEGKKMSKRE-DSSSVKWLLQSGYLPEAIANY 261

Query: 415 ---------DEV--GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                     EV    ++V F  + + +     FD  K+   ++E
Sbjct: 262 LILLGNKTPREVFSMDEAVEFFDIAKISKSPAKFDEDKLAFINRE 306


>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 461

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 124/423 (29%), Gaps = 101/423 (23%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
             IE G+  +        ++         H+GH R  VV D +   +   GY+VT   YI
Sbjct: 16  QPIEPGKVRMYVCGMTVYDYC--------HLGHARVLVVFDVVYRYLRALGYDVT---YI 64

Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227
                                                 +       A++         E 
Sbjct: 65  ---------------------------------RNITDIDDKIIRRANENGEPFQALTER 91

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                         ++ +R+D +AL +           H G+   I  ++  L  +G  Y
Sbjct: 92  -------------FIQAMREDSEALGVLPPTDEPRATAHIGE---ILAMVQTLIDKGLAY 135

Query: 288 EG-----------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS--------- 327
                             K       D+     +       D +D  L K+         
Sbjct: 136 VADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGESKRDPLDFALWKAAKPGEPAWD 195

Query: 328 ----DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQIN 382
                G   +     A   C     FD  I+  G+D    + +   A +   + +     
Sbjct: 196 SPWGPGRPGWHIECSAMSTCCLGNHFD--IHGGGADLQFPHHENEIAQSEGATGEPFVNV 253

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            +    VR+  +    KMSK  G+F T+R ++     + VR+ +L       L++D   +
Sbjct: 254 WMHNGFVRVNEE----KMSKSLGNFFTVREILRLYRPEEVRYFILTSHYRSPLNYDDSAL 309

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVH 501
           ++            A  R  +  R   +  P        R     + +F+T E L ++  
Sbjct: 310 QKARA---------ALTRLYTALRGLPEAAPAEGEAFRARFQAAMDDDFNTPEALAVLFE 360

Query: 502 LAE 504
           LA 
Sbjct: 361 LAR 363


>gi|241761613|ref|ZP_04759700.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373921|gb|EER63454.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 846

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       SG  + ++   +     +E     P+G +H+GH R   +GD LA      G+
Sbjct: 18  RWQKKWEESGCFHAKDNSDRPHSYILEMF-PYPSGRIHMGHVRNYTMGDVLARYYRMKGH 76

Query: 160 EV 161
           EV
Sbjct: 77  EV 78



 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           K +  + L E       G   KMSK   + +    ++D+ G+D+VR+ ML     E
Sbjct: 600 KDEAGIFLTESGEKVTVGRVEKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPE 655


>gi|261345125|ref|ZP_05972769.1| valine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566813|gb|EFB72348.1| valine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 964

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/216 (10%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L +       +  N         +     N TG +H+GH     + DT+ 
Sbjct: 17  TYNPAEIEQSLYTHWEKSGYFRPNGDTSKESFCVVIPPPNVTGSLHMGHAFQQTIMDTMI 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 77  RYQRMQGKNTLWQTGTDHAGIATQMV-------------------------------VER 105

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I   ++ L    D          G   
Sbjct: 106 KIAAEEGKNRHDYGRDAFIDKIWEWKAESG-GTISQQMRRLGDSVDWERERFTMDEGLSK 164

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    + ++  +Y G               D +
Sbjct: 165 AVKEAFVRMYKENLIYRGKRLVNWDPKLHTAISDLE 200


>gi|86357439|ref|YP_469331.1| valyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281541|gb|ABC90604.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Rhizobium etli
           CFN 42]
          Length = 947

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D +       G +V  +  
Sbjct: 22  ADAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                       
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-- 448
           L RD    KMSK  G+ I    ++DE G+D++R             F    +  Q ++  
Sbjct: 583 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIMAAQGRDVK 629

Query: 449 -NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +P     Y   R           F +++      + +P+ +E   +   ++  LA   R
Sbjct: 630 LDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTELARTER 685

Query: 508 VIENATIAQ 516
            +  A  A 
Sbjct: 686 DVTEALEAF 694


>gi|56552331|ref|YP_163170.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|60390665|sp|Q5NMK1|SYL_ZYMMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56543905|gb|AAV90059.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 846

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       SG  + ++   +     +E     P+G +H+GH R   +GD LA      G+
Sbjct: 18  RWQKKWEESGCFHAKDNSDRPHSYILEMF-PYPSGRIHMGHVRNYTMGDVLARYYRMKGH 76

Query: 160 EV 161
           EV
Sbjct: 77  EV 78



 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           K +  + L E       G   KMSK   + +    ++D+ G+D+VR+ ML     E
Sbjct: 600 KDEAGIFLTESGEKVTVGRVEKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPE 655


>gi|51473803|ref|YP_067560.1| glutamyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|67461944|sp|Q68WB4|SYE2_RICTY RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|51460115|gb|AAU04078.1| Glutamic acid translase [Rickettsia typhi str. Wilmington]
          Length = 469

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 94/289 (32%), Gaps = 48/289 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I   + +PTG +H+G  R A+     A       +   +                 
Sbjct: 1   MTNIITRFAPSPTGFLHIGSARTALFNYLFAR------HNNGK----------------- 37

Query: 181 VFWRYQQALYNNDSDLPEGYYP-GVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---Y 236
            F R +       +         G+    +  +    + S+  +  +E  L ++K+   Y
Sbjct: 38  FFLRIEDTDKKRSTKEAIAAIFSGLKWLGINWDGEVIFQSKRNSLYKEAALKLLKEGKAY 97

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                 + I    +        FI   ++    PS     I  + R        L  P+ 
Sbjct: 98  YCFTKQEEIARQRQQALKDKKHFIFNSEWRDKGPSTYPADIKPVIR--------LKVPRE 149

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            +    D  +  ++  ++ +    D  L+++DG+ TY    LA     ++ G  ++I   
Sbjct: 150 GSITIHDTLQGDIVIENSHID---DMILIRADGTATYM---LAVIVDDHDMGITHIIR-- 201

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G DH     R  A+  A   +   +       + L       K+SKR G
Sbjct: 202 GDDHLTNAARQIAIYHAFGYEVPNMTH-----IPLIHGADGTKLSKRHG 245


>gi|89071102|ref|ZP_01158305.1| glutamyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043350|gb|EAR49571.1| glutamyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 439

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 85/283 (30%), Gaps = 39/283 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+    +A      G  V R   I+D              +Y  A
Sbjct: 7   APSPTGYLHIGNLRAALFNYAIAR--QAGGTFVLR---IDDTDP------ERSKQQYVDA 55

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +  +   L   +           +  D+Y +      E   L    +   +  +K  +  
Sbjct: 56  IQEDLIWLGLDW----DRIERQSDRLDRYEAAKARLIEAGRLYECFESPTELDLKRKKQL 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                  +D    E      +   +R+      R GY    +         ++ +     
Sbjct: 112 NMGRPPVYDRAALE--LSDAEKDRLRE-----ERGGYWRFKLD-------LERIEWTDGI 157

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L   S       D  L+++DG   Y     A      E G  ++  V GSDH        
Sbjct: 158 LGDISIDAASVSDPVLIRADGQVLYTF---ASVVDDIEMGITDI--VRGSDHVTNTATQI 212

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +  A+   K +          L        +SKR G      
Sbjct: 213 QIIEALGGTKPRFAHH-----SLLTGPQGEALSKRLGTLALRD 250


>gi|91977312|ref|YP_569971.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123735362|sp|Q136B9|SYE_RHOPS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|91683768|gb|ABE40070.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 473

 Score = 44.1 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 98/305 (32%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+  +   + +PTG +H+G  R A+     A                         + L 
Sbjct: 2   TRPVVTRFAPSPTGFLHIGGGRTALFNWLYAR-------------------KHGGKMLLR 42

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +Q       D        + ++  G  +     +       E+ L   K Y   A
Sbjct: 43  IEDTDRQRSTQPAIDAILDGLKWLGIEWDGDTVYQFARAARHREVAEQLLAEGKAYRCYA 102

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             + +         +    + +  +   DPS     ++   R       +  P   +T  
Sbjct: 103 TAEELTAMRDKARAEGRSKLYDGSWRDRDPSDAPADLNPTIR-------LRAPLTGETVI 155

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  + +     +     D  LL+ DG+ TY    LA     ++    ++I   G DH
Sbjct: 156 EDQVQGRVVWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMDVTHIIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R + +  A+  +   + V+    +    DG   K+SKR G           +G D
Sbjct: 207 LINAARQKQIYDAMGWE---LPVMAHIPLIHGPDG--SKLSKRHG----------ALGVD 251

Query: 421 SVRFM 425
           + R M
Sbjct: 252 AYRAM 256


>gi|162447002|ref|YP_001620134.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985109|gb|ABX80758.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 516

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 109/350 (31%), Gaps = 37/350 (10%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           I + SA P    H+G+    ++ D +A      GY+V  +   ++ G +I   A +    
Sbjct: 12  IAYASAIP----HIGNVYEIILADAIARFKRLEGYDVYFQTGTDEHGQKIENNARNQNLE 67

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
               +    +++   +              D Y  E++    EK L     Y  +     
Sbjct: 68  TSDYVDMISNEIKRIFELVNVKYDKFIRTTDTYHKEVVQNIFEKLLEQGDIYLGKYEGWY 127

Query: 245 IRDDLKALNI-----------QHDIFISEDDFHRGDPSPIRDIIDNLA----------RQ 283
              D   LN               +++SED +          I+ ++           R+
Sbjct: 128 SVADEAFLNKADIVDGLAPSGDIPVWMSEDTYFFKLSKYQDRIVKHIKDNPSFIEPENRR 187

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
             V +  L       +      +  +  +S    + V    +  D    Y    L Y   
Sbjct: 188 NEVLQSFLSEKLPDLSVSRTSFKWGIPVKSN--PEHVIYVWI--DALSNYITG-LGYNLD 242

Query: 344 KYERGFDNMIYVMGSDHSGY---VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                 D M     +D       + R  AV          + +        +      KM
Sbjct: 243 S---NSDAMKDFWPADLHLIGKDIMRFHAVYWPALLLALGLPLPKKIFGHPWVLVDKNKM 299

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKEN 449
           SK  G+ +   ++V   G D++R+ +L     +   +  +  + E++  +
Sbjct: 300 SKSVGNTLYTDNLVKHFGVDALRYYVLHEIPFAADGNITYELMIERNNSD 349


>gi|86739206|ref|YP_479606.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566068|gb|ABD09877.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 521

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 75/457 (16%), Positives = 137/457 (29%), Gaps = 94/457 (20%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
            GR    +  +  +        G  HVGH    +  D  A  +   G+EV  +   +D  
Sbjct: 5   PGRKDSHQMGRYFVTTAIPYVNGKPHVGHALELIETDAYARHLRQRGHEVRFQTGTDD-- 62

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----- 226
                           AL N  +   EG  P  Y++ V            L+F +     
Sbjct: 63  ---------------NALKNVQAAEAEGITPAEYVERVATGFVGLRGPLGLSFDDFIKTS 107

Query: 227 ---------EKWLPIVKDYSVQAMMKIIRDDLKALN-IQHDIFISEDDFHRG---DPSPI 273
                    EK      D          R     L  +  ++F   D+   G   +   +
Sbjct: 108 TDPRHRPGVEKLWSACADRG-----DFYRKTYAGLYCVGCELFYQPDELVDGRCPEHGTV 162

Query: 274 RDIIDN-------------LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---- 316
            D+++              L          + P   K      ++     F ++      
Sbjct: 163 PDLVEESNWFFRLGRYQDQLHALISTDRLRIEPAARKREVLSFIEAGLEDFSASRSMSRA 222

Query: 317 --------GDDVDRPLLKSDGSYTYFAA--------DLAYFKCKYERGFDNMIYVMGSDH 360
                   GD      +  D    Y  A           Y+        D  ++V+G   
Sbjct: 223 RGWGIPVPGDPEQVIYVWFDALGNYITAPGYGNDDDSFQYWWN----DADRRVHVIGKG- 277

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
              + R  AV        A + +     V  Y     +K+SK AG+      +V    +D
Sbjct: 278 ---IIRFHAVYWPAMLLSAGVRLPDTIFVHEYLTADSMKISKSAGNAEDPADIVAAFNTD 334

Query: 421 SVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
           ++R+ ML     +   D+   ++  ++ E+    +     R  S+ ++ +D         
Sbjct: 335 ALRWWMLRDVARAGDTDYTTERLVTRANEDLANNIGNLVNRTVSMVKRYRD--------- 385

Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
               +IP  +  + +  +L     E PR I++A  A 
Sbjct: 386 ---GLIPPLALDNPAAAKLRAVRDETPRTIDDAFAAF 419


>gi|33865789|ref|NP_897348.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|48428528|sp|Q7U6T1|SYL_SYNPX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33632959|emb|CAE07770.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 857

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 67/209 (32%), Gaps = 39/209 (18%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N   SP+ L +   +   S           G       +   P+G +H+GH R  V+ D 
Sbjct: 2   NSRYSPADLEQRWQTTWRSEGLDVTPEPEDGKGFYALSMFPYPSGTLHMGHVRNYVITDV 61

Query: 150 LASLMAFSGYE------------------VTREYYINDAGA--------QINTLALSVFW 183
           +A +    G+                   + R     D           Q++ L LS+ W
Sbjct: 62  IARVQRMRGHSVLHPMGWDAFGLPAENAAIERNVDPGDWTDRNIDQMRSQLDRLGLSIDW 121

Query: 184 RYQQALYNNDS---------DLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWL-- 230
             +QA  ++D          +L +G         V  +  D+   ++E ++     W   
Sbjct: 122 DREQATCHSDYYRWTQWLFLELFDGGLAYRKNATVNWDPVDQTVLANEQVDADGRSWRSG 181

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIF 259
            +V+   +      I    +AL    D  
Sbjct: 182 ALVEQRQLNQWFLRITQYAEALLNDLDQL 210


>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 927

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 67/182 (36%), Gaps = 19/182 (10%)

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + + ER  D  IY+ G+D   G+       + A   +     V+         D    K
Sbjct: 546 IREELERPAD--IYLEGTDQYRGWFNSSLLTSIAYKGEAPYKGVVTNGF---TVDANGKK 600

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ ++   V+D+ G+D +R  +      E +     K+ +Q+ E         Y 
Sbjct: 601 MSKSQGNVVSPHEVIDQYGADILRLWVASSDFKEDVRVS-DKILQQNAE--------VYR 651

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+ FR       + D      N +  +   +  +  L   L +    I  A    + +
Sbjct: 652 RIRNTFRYILGNMDNFD---PVENTVEYDELLEIDKWALHK-LQKLVDEITEAYEEYDYH 707

Query: 520 KL 521
           KL
Sbjct: 708 KL 709


>gi|298737166|ref|YP_003729696.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356360|emb|CBI67232.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|294651262|ref|ZP_06728589.1| valine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822857|gb|EFF81733.1| valine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 965

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K    I      +     G+G    I     N TG +H+GH     + 
Sbjct: 9   NIATTYDPTEIEKKWYQIWEQQGYF--KPSGQGESFCIMIPPPNVTGSLHMGHGFNNAIM 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G                           +  L+   +D        V  +
Sbjct: 67  DALTRYNRMMG---------------------------KNTLWQPGTDHAGIATQMVVER 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +  +++     +   EK++  V ++  Q+   I R  ++ L    D          
Sbjct: 100 QLGLQGINRH-----DLGREKFIDKVWEWKEQSGGTITRQ-IRRLGSSVDWSRERFTMDE 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 154 GLSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|294637816|ref|ZP_06716089.1| valine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089056|gb|EFE21617.1| valine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 951

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L +       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYAHWEQQGYFKPNGDTSKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|261838834|gb|ACX98600.1| leucyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|215427833|ref|ZP_03425752.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|218754182|ref|ZP_03532978.1| valyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|253798472|ref|YP_003031473.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435]
 gi|254551498|ref|ZP_05141945.1| valyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|294994442|ref|ZP_06800133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635056|ref|ZP_06952836.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|306776719|ref|ZP_07415056.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001]
 gi|306780493|ref|ZP_07418830.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002]
 gi|306785245|ref|ZP_07423567.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003]
 gi|306789604|ref|ZP_07427926.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004]
 gi|306793931|ref|ZP_07432233.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005]
 gi|306798325|ref|ZP_07436627.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006]
 gi|306804200|ref|ZP_07440868.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008]
 gi|306808771|ref|ZP_07445439.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007]
 gi|307080535|ref|ZP_07489705.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011]
 gi|307085135|ref|ZP_07494248.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012]
 gi|308378018|ref|ZP_07668650.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009]
 gi|313659383|ref|ZP_07816263.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|253319975|gb|ACT24578.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435]
 gi|308214880|gb|EFO74279.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001]
 gi|308326642|gb|EFP15493.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002]
 gi|308330067|gb|EFP18918.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003]
 gi|308333907|gb|EFP22758.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004]
 gi|308337710|gb|EFP26561.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005]
 gi|308341391|gb|EFP30242.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006]
 gi|308344878|gb|EFP33729.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007]
 gi|308349188|gb|EFP38039.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008]
 gi|308353809|gb|EFP42660.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009]
 gi|308361703|gb|EFP50554.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011]
 gi|308365313|gb|EFP54164.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012]
 gi|323718956|gb|EGB28106.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CDC1551A]
          Length = 886

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 460 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 509

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 510 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 567

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 568 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 611

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 612 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 663

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 664 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 689



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPAAMESAIYQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  + +  + 
Sbjct: 77  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEQQLAVD- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDLGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   Q    D +
Sbjct: 164 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLE 197


>gi|229586972|ref|YP_002845473.1| glutamyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|228022022|gb|ACP53730.1| Glutamyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 513

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 91/283 (32%), Gaps = 40/283 (14%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             I   + +PTG +H+G  R A+     A              + N          L + 
Sbjct: 4   NVITRFAPSPTGFLHIGSARTALFNYLFAR-------------HHN------GKFLLRIE 44

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              ++       +        + L   G+ +     + L      K L   K Y      
Sbjct: 45  DTDKERSTKEAVEAIFSGLKWLGLDWNGEVIFQSKRNNLYKKAALKLLQNGKAYYCFTRQ 104

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + I    +        FI   ++   DPS     I  + R        L  P+  +    
Sbjct: 105 EEIERQRQQALENKQHFIFNSEWRDKDPSIYPTDIKPVIR--------LKTPREGSITIH 156

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  + +++  ++ +    D  LL++DG+ TY    LA     ++ G  ++I   G DH  
Sbjct: 157 DTLQGKVVIENSHID---DMVLLRADGTATYM---LAVVVDDHDMGITHIIR--GDDHLT 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              R  A+  A       +       + L       K+SKR G
Sbjct: 209 NAARQLAIYQAFGYAVPSMTH-----IPLIHGADGAKLSKRHG 246


>gi|160903261|ref|YP_001568842.1| glutamyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|238687152|sp|A9BGT8|SYE2_PETMO RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|160360905|gb|ABX32519.1| glutamyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 488

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 39/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     +       ++     ++ R           + L  ++ 
Sbjct: 11  APSPTGYLHVGGARTALFNYLFSKKNEGKFILRIEDTDIERS-----TKESEDQLINTLK 65

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W               G     Y +    E+  + + EL+           + Y     +
Sbjct: 66  WLNLNWDEGPI----IGGDYEPYRQSERLEIYQRRAKELIEKG-----KAYEAYISPEEI 116

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +++ L +              +       ++ I+    +G      L  P+ K  +  
Sbjct: 117 EEVKNQLISEGKPPHYTYDLISKYN-----TKERIEEYNYKGLKPVIFLKMPQ-KDYELD 170

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  + +++F+   +GD +   +L+S+G  TY   + A      E    ++I   G DH  
Sbjct: 171 DKIKGKVIFKKGSIGDFI---ILRSNGIPTY---NFAVVVDDIEMKITHVIR--GDDHLP 222

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R  A+  A      ++   +   V +       K+SKR G      
Sbjct: 223 NTLRQMAIYEAF-----EVEPPIFAHVSMILGPDGKKLSKRHGATSVEE 266


>gi|15612517|ref|NP_224170.1| leucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919983|sp|Q9ZJ63|SYL_HELPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4156066|gb|AAD07021.1| LEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 806

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044256|sp|A4J2F4|SYI_DESRM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 931

 Score = 44.1 bits (103), Expect = 0.058,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 43/241 (17%)

Query: 346 ERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +R  D  +Y+ GSD   G+     + + AV+ K     VL         D    KMSK  
Sbjct: 551 QRPAD--LYLEGSDQHRGWFNSSLSTSVAVTGKPPYKTVLTHGF---TVDEKGRKMSKSL 605

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ +    +  ++G+D +R  +        L      +K+ ++         +Y + R+ 
Sbjct: 606 GNVVDPLKICSQMGADILRLWVSSADYRADLALSQNILKQMTE---------SYRKIRNT 656

Query: 465 FRQAKDIFPDLD--FDLFPRNVIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKL 521
            R       D D   D    + +P+       EL +LI         +  A    E + +
Sbjct: 657 ARFLLGNLYDFDPVKDKVAYDKLPELDRVALMELHKLIKQ-------VLAAYENYEFHIV 709

Query: 522 --A--FYL-YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
             A   Y   DL++     +    ++     V  +  +          A  +++   L+ 
Sbjct: 710 YHAVHNYCVVDLSA----FYLDIIKDRLYTAVPGSLER---------RAAQTVLYEALDA 756

Query: 577 I 577
           +
Sbjct: 757 L 757


>gi|283852945|ref|ZP_06370204.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571635|gb|EFC19636.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 103/318 (32%), Gaps = 44/318 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R +VV D L   +   GYEVT      D   +I         +   +     +++
Sbjct: 36  HIGHARSSVVFDVLVRYLRHLGYEVTFVRNFTDVDDKI--------IKKANSEGATSAEI 87

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E Y    Y         D     +L    E               ++I +         
Sbjct: 88  AERYIAAFY--------EDMDRLGILRADAEPRATEYIAEMADMAARLIENGHAYRTPSG 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        RD+ D       +  G    P  +     D     L  +++  
Sbjct: 140 DVYFRVRSFDGYGKLSGRDVED-------MRSGARVAPGEEKEDPLDF---ALW-KASKP 188

Query: 317 GDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---- 371
           G+ V D P       +    + ++      E+     I + G          E       
Sbjct: 189 GEPVWDSPFGPGRPGWHLECSVMS------EKLLGIPIDIHGGGQDLIFPHHENEIAQSE 242

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
           AA      +  V     VR+  +    KMSK  G+F+T+R + +    + +RF ++    
Sbjct: 243 AATGSDFCRFWV-HNGFVRINTE----KMSKSLGNFVTIRTIYERYLPEVLRFFLVSSHY 297

Query: 432 SELLDFDFCKVKEQSKEN 449
              LD+   +  +++++ 
Sbjct: 298 RSPLDYS-DQALDEAEKG 314


>gi|261868577|ref|YP_003256499.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413909|gb|ACX83280.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 940

 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 86/242 (35%), Gaps = 23/242 (9%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLAYFKC 343
            + E      K+      D+D K+LL         V   L +  D   TY +  +   + 
Sbjct: 492 LLEEVAKRVEKAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDSGSTYSS--VVANRP 549

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           ++E    +M Y+ GSD   G+      ++ A   K     VL         DG   KMSK
Sbjct: 550 EFEGKAADM-YLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGF---TVDGQGRKMSK 605

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +T + V+D+ G D +R  +     +  +      +K             A    R
Sbjct: 606 SIGNVVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKR------------AADSYR 653

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-AEYPRVIENATIAQEPYKL 521
            I   A+ +  +L+     R+ +  E         +   L A+    I++A    + + +
Sbjct: 654 RIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALEAQ--NEIKDAYDNYQFHAV 711

Query: 522 AF 523
             
Sbjct: 712 VQ 713


>gi|226951602|ref|ZP_03822066.1| valyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837661|gb|EEH70044.1| valyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 965

 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K    I      +     G+G    I     N TG +H+GH     + 
Sbjct: 9   NIATTYDPTEIEKKWYQIWEQQGYF--KPSGQGESFCIMIPPPNVTGSLHMGHGFNNAIM 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G                           +  L+   +D        V  +
Sbjct: 67  DALTRYNRMMG---------------------------KNTLWQPGTDHAGIATQMVVER 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +  +++     +   EK++  V ++  Q+   I R  ++ L    D          
Sbjct: 100 QLGLQGINRH-----DLGREKFIDKVWEWKEQSGGTITRQ-IRRLGSSVDWSRERFTMDE 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 154 GLSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|300741553|ref|ZP_07071574.1| leucine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380738|gb|EFJ77300.1| leucine--tRNA ligase [Rothia dentocariosa M567]
          Length = 831

 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 3/152 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +G+        KG +  ++     P+G +H+GH     +GD  A      G
Sbjct: 21  AKWRPYWEETGVFKPTGNAVKGRRYVLDMF-PYPSGDLHMGHAEAFAIGDMNARYYKQCG 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY--YPGVYLKHVGKELADK 216
           Y+V      +  G      A+      ++  Y N     E +  Y            +D 
Sbjct: 80  YDVLHPIGWDSFGLPAENAAIKNGTHPKEWTYKNIDTQAESFKRYAIAVDWDRRLHTSDP 139

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +   +  E++      Y   +M+     D
Sbjct: 140 EYYKWTQWLFEQFYKKGLAYRKDSMVNWCPKD 171


>gi|257452950|ref|ZP_05618249.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059491|ref|ZP_07923976.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685167|gb|EFS22002.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 854

 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
               +K         +  G N +       +  +   P+G +HVGH R   +GD +A   
Sbjct: 9   KEVEKKWQERWEKDQVFKGSNTVEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYK 68

Query: 155 AFSGYEV 161
              GY V
Sbjct: 69  RMKGYNV 75


>gi|255994058|ref|ZP_05427193.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993726|gb|EEU03815.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 897

 Score = 44.1 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 63/240 (26%), Gaps = 41/240 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +    +    +   +  K     +     N TG +H+GH     + D +   
Sbjct: 21  DPKKFENRIYKAWMDADAFKAKVDTKKQPFTVVMPPPNITGVLHMGHALDQSLQDAIIRY 80

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+                           +AL+   +D          L  V +E 
Sbjct: 81  KRMRGF---------------------------EALWIPGTDHASIATEVKILNEVKEEG 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K       F E  W         +     I +  K L +  D               +
Sbjct: 114 LSKEELGRERFLERAWQ------WNERYGNKIVEQCKKLGVSADWSRKRFTMDEVCSKAV 167

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           ++   +L  +GY+Y+G        +     S    + +    +  +      D  D  ++
Sbjct: 168 KEYFVHLYEKGYIYKGKKIINYCPVCRTSLSDAEVEHEEKNGKYWYFRYDAADGDDSIII 227



 Score = 37.2 bits (85), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +   +  V  A+     ++      +  L RD    KMSK  G+ I    ++DE G+D++
Sbjct: 500 FFWVVRMVFTALELD-GRLPFDNVYIHGLVRDKDGQKMSKSLGNGIDPLKIIDEYGADAL 558

Query: 423 RFMMLW 428
           RFM+L 
Sbjct: 559 RFMLLT 564


>gi|323492966|ref|ZP_08098104.1| valyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312797|gb|EGA65923.1| valyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 952

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQAWEEKGYFKPHGDTTKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L  +  +Y G               D +
Sbjct: 152 AVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|307730763|ref|YP_003907987.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585298|gb|ADN58696.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 27/229 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GD+ +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQAGIEAWQTLDPRELIGDEANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTE-- 670

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                  +Y R R+  R       D D+    R V     E D   + L
Sbjct: 671 -------SYRRIRNTLRFLLANLSDFDYAKNARPV-EDWLEIDRYAVAL 711


>gi|269140441|ref|YP_003297142.1| valyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267986102|gb|ACY85931.1| valyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560234|gb|ADM42898.1| Valyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 951

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L +       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYAHWEQQGYFKPNGDTSKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|150021072|ref|YP_001306426.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793593|gb|ABR31041.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 634

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 119/360 (33%), Gaps = 73/360 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--YQQAL 189
                H+G     ++GD +A      GY+V   +Y+         +  +   R    + L
Sbjct: 13  VNSEPHIGSAYTTIIGDIIARYKRLIGYDV---FYLTGTDEHGQKIMQAAKKREIEPKQL 69

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRD 247
            +  S+     +  + +           +   +   + K +  V+ +  + +    I + 
Sbjct: 70  CDELSEKFSQLWKDLKIT----------NDYFIRTTDPKHMKTVQLFVSKMLENGDIYKG 119

Query: 248 DLKALN-IQHDIFISEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             K    I  + + +ED+  + +   I       ++ +  + Y +             K 
Sbjct: 120 IYKGWYCIPCETYWNEDETEQIEGKHICPTCGRELNFVEEENYFFRLSKYTEPLLKHFKE 179

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM 356
           + D  +  FR   +   ++  L            DL+  +  ++ G       +++IYV 
Sbjct: 180 NPDFVEPDFRRNEMLKILESGL-----------KDLSITRTTFDWGIPMPNDPNHVIYVW 228

Query: 357 -------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG-------- 395
                        GSD   + K   A    + ++  + + L+   + +            
Sbjct: 229 VDALINYISAIGYGSDQEKFEKWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFA 288

Query: 396 ------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                    K+SK  G+ I  R  V + G+D VR+ +         D  F K  + S+EN
Sbjct: 289 HGWLTVNGQKISKSLGNAIDPREFVKKYGNDVVRYYLAR-------DIVFGKDGDFSEEN 341


>gi|42518905|ref|NP_964835.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583191|gb|AAS08801.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 935

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 58/320 (18%)

Query: 215 DKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD    
Sbjct: 424 DKFRDQILAEIEKANFIPAWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPIV 482

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            P  I  +     ++G            + EG           + + D   + F S   G
Sbjct: 483 TPETIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDS---G 539

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 + + DG                  GF   +Y+ GSD   G+       + AV+ 
Sbjct: 540 SSWAGVMQERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVTG 582

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  + 
Sbjct: 583 KAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDVA 639

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                +++ ++         +Y + R+  R       D D                  E+
Sbjct: 640 VSQDILRQSAE---------SYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEI 690

Query: 497 QLIVHLAEYPRVIENATIAQ 516
           +L        R+IE A  A 
Sbjct: 691 KL-------NRLIEEAIEAY 703


>gi|325996420|gb|ADZ51825.1| Valyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 872

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 96/312 (30%), Gaps = 42/312 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKC----- 343
               K        R + LF  + +     D+  + L+            +          
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQQAILPLINRTIPIIADAHVEM 268

Query: 344 -------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL----Y 392
                  K   G D   Y +G  H     ++        ++K  +N    E   L     
Sbjct: 269 EFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGEFENLERLEA 321

Query: 393 RDGMPIKMSKRA 404
           RD +  K+ + A
Sbjct: 322 RDKVVAKLKENA 333


>gi|294155780|ref|YP_003560164.1| valine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600430|gb|ADE19926.1| valine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 830

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 9/171 (5%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +   + + +        +            +I     N TG +H+GH    ++ DT+   
Sbjct: 6   NHKLIEEGIEQEWRITEKVFSTHDTSKKPFSILLPPPNVTGKLHLGHAFDTLIPDTIIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---------DLPEGYYPGV 204
               G++      ++ AG    +      W  ++   ++              E Y    
Sbjct: 66  KKLKGFDTFWISGMDHAGIATQSKIEEHLWNTKKLTKHDIGREEFLKLTWQWKEDYANLF 125

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             +     LA  Y  E      +    +VK +        I  D+KA+N  
Sbjct: 126 REQWSRLGLALDYERERFTMDNDASEAVVKVFVDLYNKGYIYKDVKAVNWD 176


>gi|260175394|ref|ZP_05761806.1| glutamyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315923624|ref|ZP_07919864.1| glutamyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313697499|gb|EFS34334.1| glutamyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 505

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGEQGPYRQSERREIYKKYVQILLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DIHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|215446695|ref|ZP_03433447.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 714

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 288 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 337

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 338 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 395

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 396 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 439

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 440 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 491

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 492 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 517


>gi|194754701|ref|XP_001959633.1| GF11945 [Drosophila ananassae]
 gi|190620931|gb|EDV36455.1| GF11945 [Drosophila ananassae]
          Length = 1048

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 60/219 (27%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSG----IEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S          EYGR             +     N TG +H+GH     +
Sbjct: 94  SPRYVEAQWYSWWEKEGFFTPEYGRPSIDAPNPNGNFVMIIPPPNVTGSLHLGHALTNAI 153

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 154 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 195

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I + LK+L   +D         
Sbjct: 196 -------------SRHDLGREKFIERIWDWRREKGGR-IYEQLKSLGSSYDWTRVAFTMD 241

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 242 PKLCRAVTEAFVRLHEEGSIYRSSRLVNWSCTLRSAISD 280


>gi|1890130|gb|AAB49704.1| valyl tRNA synthetase [Arabidopsis thaliana]
          Length = 1107

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 64/236 (27%), Gaps = 38/236 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   +       +  +         I     N TG +H+GH   + + DT+   
Sbjct: 141 SPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRW 200

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +                           
Sbjct: 201 KRMSGYNALWVPGVDHAGIATQVVVEKKIMRDR--------------------------- 233

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E+++  V  +  Q     I   L+ L    D               +
Sbjct: 234 ----GMTRHDVGREEFVKEVWKWKNQYG-GTILTQLRRLGASLDWSRECFTMDEQRSKAV 288

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +    L ++G +Y  I         +    D +          D  ++ LLK  G
Sbjct: 289 TEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVE------VEYIDIKEKTLLKVPG 338


>gi|109899865|ref|YP_663120.1| valyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109702146|gb|ABG42066.1| valyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 921

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 64/241 (26%), Gaps = 41/241 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + +           +     G+G    I     N TG +H+GH     + DTL 
Sbjct: 4   TFSPQNIEQQCYQAWEDKGYF--KASGEGQPYCILLPPPNVTGSLHMGHGFQQTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G     +   + AG   Q+      V  R   A                     
Sbjct: 62  RYHRMKGDNTLWQCGTDHAGIATQM------VVERQLNA--------------------- 94

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                        +   E ++  + D+  ++    I   ++ L    D            
Sbjct: 95  -------QGKTRHDLGREAFVEKIWDWKKESG-GNITQQMRRLGTSPDWDREVFTMDDDL 146

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + ++   L  +G +Y G               D + L          +  PL  +DG
Sbjct: 147 SEAVNEVFVRLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEENGFMWHMRYPL--ADG 204

Query: 330 S 330
           +
Sbjct: 205 T 205


>gi|58263416|ref|XP_569118.1| valine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134108404|ref|XP_777153.1| hypothetical protein CNBB3840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259838|gb|EAL22506.1| hypothetical protein CNBB3840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223768|gb|AAW41811.1| valine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1109

 Score = 44.1 bits (103), Expect = 0.060,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 58/233 (24%), Gaps = 48/233 (20%)

Query: 65  AELIVARIKIDPDVDSVFIAGK---GFINLYLSP-SYLRKILSSIVVSGIEYGR----NL 116
           AE  V      P  +   ++G    G+      P              G    R      
Sbjct: 111 AEAWVD---TTPKGEKKDVSGNFPSGY-----DPIQVEAAHYDWWNAKGFFKPRYGADGK 162

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                   I F   N TG +H+GH     + D L       G       Y+         
Sbjct: 163 PLDKGTFCITFPPPNVTGNLHIGHALTVSLQDALIRWKRMQG---QTVLYL-PGYDHAGI 218

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              +V                           V + L         ++  EK+L  V ++
Sbjct: 219 ATQAV---------------------------VEQRLMKTEGHSRHHYGREKFLEKVWEW 251

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             Q   KI    +  L    D             + +R+    +  +G +Y  
Sbjct: 252 KDQYQGKITNQ-MTRLGGSFDWDKVAFTMDDNLSTAVREAFVQMHEKGLLYRA 303


>gi|319407358|emb|CBI81005.1| glutamyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 471

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 57/308 (18%), Positives = 99/308 (32%), Gaps = 62/308 (20%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTREYYINDAGAQINTL 177
            I   + +PTG +H+G  R A+     A       L+     +  R          +  +
Sbjct: 3   VITRFAPSPTGFLHIGSARTALFNWLYAKHTGGKMLLRIEDTDRERS-----TETAVKAI 57

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              + W   Q   +  S            + + K+    Y    L    E          
Sbjct: 58  IDGLHWMGLQYEGDPISQFKRAERHRQVAEQLVKDGKAYYCYATLEELAEMRENAFA--- 114

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                       K L  ++D    + D  +  P  I+ +I             +  P+  
Sbjct: 115 ------------KGLPPRYDGRWRDRDISKA-PKGIKPVI------------RIKAPQDG 149

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D  +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I   G
Sbjct: 150 ETILHDRVQGDIRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGITHIIR--G 201

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +DH     R   +  A+      I V+    +    +G   K+SKR G           +
Sbjct: 202 NDHLTNAARQAIIFNAMGWD---IPVMAHIPLIHGENGA--KLSKRHG----------AL 246

Query: 418 GSDSVRFM 425
           G D+ R M
Sbjct: 247 GIDAYRKM 254


>gi|325109272|ref|YP_004270340.1| valyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969540|gb|ADY60318.1| Valyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 995

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 32/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +++           +  N         I     N TG +H+GH     + D L    
Sbjct: 10  PKDVQQKWYEFWEQNGYFNANPNPDKKPHVIMIPLPNVTGALHMGHALNGTIQDLLTRWR 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY                           +AL+   +D        V    V + + 
Sbjct: 70  RMQGY---------------------------EALWMPGTDHAGIATQAV----VERRMF 98

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++      +   E  +  +  +   +  K I + LK L    D   +           +R
Sbjct: 99  EQEGLTRHDIGREALVNRIWKWK-DSYEKRILNQLKQLGASCDWRRTRFTLDDVCSKAVR 157

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                L   G +Y G          Q    D +
Sbjct: 158 RTFLKLFEDGKIYRGKRLVNWDTYLQTAVADDE 190


>gi|268324709|emb|CBH38297.1| leucyl-tRNA synthetase, N-terminal sequence [uncultured archaeon]
          Length = 146

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 30/168 (17%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   +   + R+     +      G        K  +       +GP+H+GH R   +GD
Sbjct: 5   NFKEIEDKWQRRWEERKIFDADIGGV------KKFFLSVPYPYTSGPLHIGHGRTYTLGD 58

Query: 149 TLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            +A      GY V     +++   G  I  +A S+      A        P   Y  +Y 
Sbjct: 59  IIARFKRLQGYNVLFPMAFHV--TGTPILAIADSI------AKGEETVVAPYNDYIAIY- 109

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
                E A K    + +F + + +              I DDL+   I
Sbjct: 110 -----EGAAKVKEIVSSFGKPENVANF-------FADRISDDLRGWGI 145


>gi|224081316|ref|XP_002306367.1| predicted protein [Populus trichocarpa]
 gi|222855816|gb|EEE93363.1| predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 12/190 (6%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS + K       +   +  +         I     N TG +H+GH   A + DT+   
Sbjct: 82  NPSNVEKCWYEWWEASGFFVADANSSKPPFVILLPPPNVTGNLHLGHALTAAIQDTMIRW 141

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-------DSDLPEGYYPGVYL 206
              SG+       ++ AG     +      R +Q+  ++              +  G  +
Sbjct: 142 KRMSGFNALWVPGLDHAGIATQVIVEKKLMRERQSTRHDLGREKFVSEVWKWKHEHGGNI 201

Query: 207 KHVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               + L     +S E     E +   +++++       +I  DL+   + H        
Sbjct: 202 LKQLRRLGASLDWSRECFTMDERRSKAVIEEFVRLFKEGLIYRDLR---LVHWDCTLRTA 258

Query: 265 FHRGDPSPIR 274
               +   I 
Sbjct: 259 ISDDEVDKID 268


>gi|86749929|ref|YP_486425.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123292536|sp|Q2IW96|SYE_RHOP2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|86572957|gb|ABD07514.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 473

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 100/305 (32%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+  +   + +PTG +H+G  R A+     A      G ++       D          +
Sbjct: 2   TRPVVTRFAPSPTGFLHIGGGRTALFNWLYAR---KLGGKMLLRIEDTDRQRSTQPAIDA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +      D D    +      + V ++L          +   + L  ++D +   
Sbjct: 59  ILDGLKWLGIEWDGDTVYQFARAARHREVAEQLLA-AGKAYRCYATAEELTAMRDKARAE 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               + D         D   SE       P+ ++  I  L            P   +T  
Sbjct: 118 GRSKLYD-----GSWRDRDPSEA------PADMKPTI-RLKA----------PLDGETVI 155

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  + +     +     D  LL+ DG+ TY    LA     ++    ++I   G DH
Sbjct: 156 EDQVQGRVVWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMDVTHVIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R + +  A+  +   + V+    +    DG   K+SKR G           +G D
Sbjct: 207 LINAARQKQIYDAMGWE---LPVMAHIPLIHGPDG--SKLSKRHG----------ALGVD 251

Query: 421 SVRFM 425
           + R M
Sbjct: 252 AYRAM 256


>gi|326387885|ref|ZP_08209491.1| glutamyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207931|gb|EGD58742.1| glutamyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 492

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 108/357 (30%), Gaps = 66/357 (18%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +  +   + +PTG +H+G  R A+     A     +G +        D     +    +
Sbjct: 15  QQAVVTRFAPSPTGFLHIGGARTALFNWLFAR---HTGGKYLLRIEDTDRVRSTDAAIDA 71

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +F          D +    +        V  +L     +       E+     +    QA
Sbjct: 72  IFDGLSWLGLGGDEEPVFQFARSDRHADVAHQLLAAGHAYRCYLTPEELAA--RRELAQA 129

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
             +  R D               ++   DP+   +        G  Y   +  P+   T 
Sbjct: 130 ERRPFRID--------------SEWRDADPATWPE--------GQSYVIRIKAPREGETV 167

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + Q+   +  + D     +L+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 168 IDDLVQGQITVSNREIDDF---VILRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 219

Query: 361 SGYVKRLEAVAAAVSE-----KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                R   V  A+               +   + L       K+SKR G  + +    D
Sbjct: 220 INNAFRQLVVIRAMHTIEQAAGTGAWPDPIYAHIPLIHGADGAKLSKRHG-ALGVDAYRD 278

Query: 416 EVG-------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
           E+G                          ++V +  +   N     FD  K+   + 
Sbjct: 279 ELGLLPEAVFNYLLRLGWGHGDAEIISREEAVEWFDITHVNKGAARFDLKKLLNLNG 335


>gi|325830439|ref|ZP_08163896.1| leucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487906|gb|EGC90344.1| leucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 859

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       + +        K  K  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  RWQKEWDDADLYKVTEDPSKPKKYVLEMF-PYPSGDIHMGHVRNYTIGDVVARYYKMRGF 72

Query: 160 EV 161
           +V
Sbjct: 73  DV 74


>gi|289758580|ref|ZP_06517958.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85]
 gi|289714144|gb|EFD78156.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85]
          Length = 699

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 273 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 322

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 323 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 380

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 381 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 424

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 425 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 476

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 477 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 502


>gi|289553760|ref|ZP_06442970.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605]
 gi|289438392|gb|EFD20885.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 449 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 498

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 499 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 556

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 557 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 600

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 601 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 652

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 653 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 678



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 6   DPAAMESAIYQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  + +  + 
Sbjct: 66  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEQQLAVD- 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 98  ----GKTKEDLGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   Q    D +
Sbjct: 153 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLE 186


>gi|15223829|ref|NP_172913.1| TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide
           binding / valine-tRNA ligase [Arabidopsis thaliana]
 gi|21542452|sp|P93736|SYV_ARATH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|332191069|gb|AEE29190.1| Valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1108

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 64/236 (27%), Gaps = 38/236 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   +       +  +         I     N TG +H+GH   + + DT+   
Sbjct: 141 SPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRW 200

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +                           
Sbjct: 201 KRMSGYNALWVPGVDHAGIATQVVVEKKIMRDR--------------------------- 233

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E+++  V  +  Q     I   L+ L    D               +
Sbjct: 234 ----GMTRHDVGREEFVKEVWKWKNQYG-GTILTQLRRLGASLDWSRECFTMDEQRSKAV 288

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +    L ++G +Y  I         +    D +          D  ++ LLK  G
Sbjct: 289 TEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVE------VEYIDIKEKTLLKVPG 338


>gi|15609585|ref|NP_216964.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841972|ref|NP_337009.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793629|ref|NP_856122.1| valyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638331|ref|YP_978555.1| valyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662283|ref|YP_001283806.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823649|ref|YP_001288403.1| valyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|215404386|ref|ZP_03416567.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412207|ref|ZP_03420969.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215431396|ref|ZP_03429315.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|224990825|ref|YP_002645512.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254232583|ref|ZP_04925910.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis C]
 gi|254365225|ref|ZP_04981271.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|260201576|ref|ZP_05769067.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205754|ref|ZP_05773245.1| valyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443974|ref|ZP_06433718.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289575143|ref|ZP_06455370.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85]
 gi|289746231|ref|ZP_06505609.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289751055|ref|ZP_06510433.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92]
 gi|289754557|ref|ZP_06513935.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762618|ref|ZP_06521996.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis GM 1503]
 gi|297732047|ref|ZP_06961165.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525927|ref|ZP_07013336.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|54039701|sp|P67600|SYV_MYCBO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|54042057|sp|P67599|SYV_MYCTU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2791488|emb|CAA16025.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE)
           (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13882245|gb|AAK46823.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619222|emb|CAD97336.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE)
           (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121493979|emb|CAL72456.1| Probable valyl-tRNA synthase protein valS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601642|gb|EAY60652.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis C]
 gi|134150739|gb|EBA42784.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506435|gb|ABQ74244.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722176|gb|ABR06801.1| valyl-tRNA synthase valS (valyl-tRNA synthetase) [Mycobacterium
           tuberculosis F11]
 gi|224773938|dbj|BAH26744.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289416893|gb|EFD14133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289539574|gb|EFD44152.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85]
 gi|289686759|gb|EFD54247.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289691642|gb|EFD59071.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92]
 gi|289695144|gb|EFD62573.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710124|gb|EFD74140.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis GM 1503]
 gi|298495721|gb|EFI31015.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|326904063|gb|EGE50996.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis W-148]
 gi|328458240|gb|AEB03663.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 4207]
          Length = 876

 Score = 44.1 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 450 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 499

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 500 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 557

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 558 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 601

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 602 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 653

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 654 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 679



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 7   DPAAMESAIYQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  + +  + 
Sbjct: 67  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEQQLAVD- 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 99  ----GKTKEDLGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   Q    D +
Sbjct: 154 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLE 187


>gi|324989810|gb|EGC21753.1| glutamate--tRNA ligase [Streptococcus sanguinis SK353]
 gi|325686639|gb|EGD28665.1| glutamate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVKELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
                    + +    +   +I+E   + G     +   I      G +    L   ++ 
Sbjct: 108 TEEELAAERERQEAAGETPRYINE---YLGMSEEEKAAYIAEREAAGIIPTVRLAVNETG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  D+ + ++ F    +G   D  + K DG  TY   + A     +     ++I   G
Sbjct: 165 VYKWTDIVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|307708991|ref|ZP_07645451.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620327|gb|EFN99443.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 665

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|296106520|ref|YP_003618220.1| isoleucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648421|gb|ADG24268.1| isoleucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 931

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 74/242 (30%), Gaps = 28/242 (11%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD---DVDRPLLKSDGSYTYFAADLAYF 341
            +    +   KS      D+D  +LL       D   D     L S G   Y        
Sbjct: 491 LIERVAMMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDS-GISHYSV-----L 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K   +  F   +Y  GSD   G+       A A+        VL         D    K+
Sbjct: 545 KHNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGY---TVDAEGKKL 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY R
Sbjct: 602 SKSKGNYVALDKLVNQHGADILRLWVASTDYRHEVSISEEIIKRNAD---------AYRR 652

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY 519
            R+  R       D +      + I  +   +     L    L +    I  A      +
Sbjct: 653 IRNTARFLLANLFDFN---PASDCIEAKELLELDRWALKRCQLLQ--EEIITAYENYHFH 707

Query: 520 KL 521
            +
Sbjct: 708 LI 709


>gi|261886301|ref|ZP_06010340.1| glutamylglutaminyl-tRNA synthetase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 379

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 87/281 (30%), Gaps = 50/281 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+  + + SL   SG+                             
Sbjct: 5   APSPTGDMHIGNLRAAIF-NYICSLQDNSGF----------------------------I 35

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   D+D           K +   L   Y      + + K L   ++++ + + +     
Sbjct: 36  LRIEDTDNARNI--DAKDKEIFDILTKFYIKWDTLYYQSKNLKFHQEFAAKLLAEK---- 89

Query: 249 LKALNIQHDIFISEDDFH----RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            KA     D    E         G P       +NL+    +        + K   +   
Sbjct: 90  -KAFLCFCDETTLESKKEAAKTAGKPYRYDGTCENLSDDDVLSNPRPAAVRLKIKNEPQS 148

Query: 305 DRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
               +         ++D   LL++D + TY   + A        G   +I   G DH   
Sbjct: 149 FYDAIKGEVKFEPQNIDSFVLLRADKTPTY---NFACAIDDMLEGVTFVIR--GEDHVSN 203

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +   +  A+     +I      ++    +    KMSKR 
Sbjct: 204 TPKQNLIREALGY-TGKIGYAHLPII---LNKEGKKMSKRE 240


>gi|218680173|ref|ZP_03528070.1| isoleucyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 408

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 89/267 (33%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL   + +       +  +  F              D+      S  ++T+   D 
Sbjct: 134 VNARILEAFEQEGADAWFAEGAKERFLGNDHDHSRWKQVMDILDVWFDSGSTHTFTLED- 192

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 193 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 244

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 245 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 295

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE   ++     A 
Sbjct: 296 YRKLRNTIRWMLGTLAHDKGEEIAFADLPELE-------QLMLHRLAELDELVRENYDAF 348

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 349 DFKKIARALIDFANVELSAFYFDVRKD 375


>gi|149245086|ref|XP_001527077.1| valyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449471|gb|EDK43727.1| valyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 1103

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 100/358 (27%), Gaps = 74/358 (20%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-----ANPTGPMHVGHCRCAVVGD 148
           +P  +     S       +   L   G   +    S      N TG +H+GH     + D
Sbjct: 150 NPKNVESSWYSWWDKSGFFEPELTEDGKIKSEGVFSIPCPPPNVTGALHIGHALTVSIQD 209

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G         + AG    ++     W  +Q   ++        Y       
Sbjct: 210 TLIRWNRMQGKTTLFIPGFDHAGIATQSVVEKQIWAKEQKTRHD--------YGREKFVE 261

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              E  ++Y S                         I++  K L   +D        +  
Sbjct: 262 KVWEWKEEYHSR------------------------IKNQFKKLGASYDWSRERFTLNPD 297

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC----DMDRKQLLFRSTMVGDDVDRPL 324
             + + +    +   G +Y  +     S          ++D K +  R+ +     D+ +
Sbjct: 298 LSAAVTEAFVRMHEDGTIYRSLRLVNWSVKLNTAISNLEVDNKNITGRTLLAVPGYDQKI 357

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV--KRLEAVAA----AVSEKK 378
               G+ T F+                   V GSD    V   R E +      AV  K 
Sbjct: 358 EF--GTLTSFSYQ-----------------VDGSDEKLTVATTRPETIFGDTGVAVHPKD 398

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMMLWRKNSELL 435
            +   L  + V             R    +T    VD E G+ +V+      +N   +
Sbjct: 399 PRYKHLHGKYVLHP-------FLDRKLPIVTDEEAVDMEFGTGAVKITPAHDQNDYNV 449


>gi|125718503|ref|YP_001035636.1| methionyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498420|gb|ABN45086.1| Methionyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 666

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 109/353 (30%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D LA      GY+V                 L    +  QA   
Sbjct: 16  PSGKLHIGNATTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQAKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAA-----------------DLAYFKCKYERG--- 348
              R   +    DR +        +                    DLA  +  +  G   
Sbjct: 171 YFLR---LSKYQDRLVEFFKSHPDFITPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVAV 227

Query: 349 ---FDNMIYVM-----------GSDHSGYV---------KRLEAVAAAV----SEKKAQI 381
                ++IYV            G     +               VA  +    S     +
Sbjct: 228 PSNPKHVIYVWIDALLNYATALGYGQDDHANYDKFWNNGTVYHMVAKDILRFHSIYWPIL 287

Query: 382 NVLLCELV--RLYRDG----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            ++L   +  RL   G       KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 288 LMMLDIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 340


>gi|119503290|ref|ZP_01625374.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119460936|gb|EAW42027.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 61/203 (30%), Gaps = 35/203 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       G +   +   + AG     L      R  +A 
Sbjct: 40  PNVTGSLHMGHGFQQAIMDALIRYQRMKGADTLWQVGTDHAGIATQMLV----ERQLEA- 94

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                        G+  + +G+               + ++  V ++  Q+   I R  L
Sbjct: 95  ------------EGIKREDIGR---------------DAFIEKVWEWKEQSGGTITRQ-L 126

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           + L    D          G    ++ +   L  QG +Y G               D + +
Sbjct: 127 RRLGASADWSRERFTMDEGLSEAVQQVFIQLYDQGLIYRGQRLVNWDPKLHTAISDLEVV 186

Query: 310 LFRSTMVGDDVDRPLLKSDGSYT 332
                     +  PL  SDGS  
Sbjct: 187 SEEEQGFMWHLRYPL--SDGSGH 207



 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 121/400 (30%), Gaps = 77/400 (19%)

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDP 270
           A K ++  +   E++ +  V           +R D++   I   ++        +  G  
Sbjct: 360 AKKLAAPAIAAVEDETIKFVPKQWENTYYAWMR-DIQDWCISRQLWWGHRIPAWYDDGGN 418

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +      +     + + I                  L   ST+   +    + K   +
Sbjct: 419 VFVGHDEAAVRAAHKIDDNITLTQDDDVLDTWFSS--ALWTFSTLGWPNKTPEMSKFHPA 476

Query: 331 YTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
                  D+ +F          MI +     S +                ++      + 
Sbjct: 477 SVLVTGFDIIFFWV------ARMIMM-----SLHF-------------CDEVPFHTVYVH 512

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSD---------------SVRFMMLWRKN--- 431
            L RDG   KMSK  G+ I    ++D +  +               + R     RK+   
Sbjct: 513 GLVRDGEGQKMSKSKGNVIDPIDLIDGIDLESLVAKRTGGMMQPQMAARIAKQTRKHFPE 572

Query: 432 ------SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                 ++ L F F  +    ++  + +  +     R+   +  +    +  +       
Sbjct: 573 GIQGYGTDALRFTFYSLASTGRD--IKFDMHRMEGYRNFCNKLWNAARYVLGNCEGLATS 630

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS----VF--HGH--WS 537
           P  +E   ++  ++  LA       +A    E   +  Y +DLAS     F  +    W 
Sbjct: 631 PAHAEPSLADRWILSRLA-------SAAKDCE-QAIEQYRFDLASQALYDFVWNEFCDWY 682

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
                P L   +AN  +  + R  LV     ++ + L ++
Sbjct: 683 LELSKPILWDEEANPDQAMVTRHTLV----RVLENILRLL 718


>gi|37528304|ref|NP_931649.1| valyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81418134|sp|Q7MZ25|SYV_PHOLL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|36787742|emb|CAE16855.1| valyl-tRNA synthetase (valine--tRNA ligase) (VALRS) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 965

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L +       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 18  TYNPKEIEQPLYNHWEKSGYFKPNGDTSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQSGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++    I + ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGREAFIDKIWQWKAESG-GTITNQMRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G               D +
Sbjct: 166 AVKEAFVRLYQENLIYRGKRLVNWDPKLHTAISDLE 201


>gi|307637822|gb|ADN80272.1| Valyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325998009|gb|ADZ50217.1| Valyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 872

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 96/312 (30%), Gaps = 42/312 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKC----- 343
               K        R + LF  + +     D+  + L+            +          
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQQAILPLINRTIPIIADAHVEM 268

Query: 344 -------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL----Y 392
                  K   G D   Y +G  H     ++        ++K  +N    E   L     
Sbjct: 269 EFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGEFENLERLEA 321

Query: 393 RDGMPIKMSKRA 404
           RD +  K+ + A
Sbjct: 322 RDKVVAKLKENA 333


>gi|300690677|ref|YP_003751672.1| isoleucine--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077737|emb|CBJ50375.1| Isoleucine--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 960

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 81/241 (33%), Gaps = 31/241 (12%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDV 320
            H   P  +  +   + + G      L P +    +    + + D   + F S      V
Sbjct: 507 LHPRTPELLEHVAQRIEKSGVEAWQTLDPRELLGDEADMYEKNRDTLDVWFDSGTTHWHV 566

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
            R      GS+     D A  +    R  D  +Y+ GSD   G+       A+ +  K  
Sbjct: 567 IR------GSHAADLYD-AAAELPEGRLAD--LYLEGSDQHRGWFHSSLLTASMLYGKPP 617

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L         DG   KMSK  G+ I  + +  ++G++ +R  +     S  L    
Sbjct: 618 YKALLTHGF---TVDGEGRKMSKSIGNTIAPQEIAGKMGAEIIRLWVASTDYSGELAISD 674

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQ 497
             +K   +          Y R R+  R       D D     R+ +P E   E D   + 
Sbjct: 675 EILKRVVEG---------YRRIRNTLRFLLANLTDYDH---ARHALPPEQWLEIDRYAVA 722

Query: 498 L 498
           L
Sbjct: 723 L 723


>gi|288959465|ref|YP_003449806.1| leucyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911773|dbj|BAI73262.1| leucyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 856

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G    R    +     +E     P+G +H+GH R   +GD +A      G
Sbjct: 11  AKWQGVWDGKGCFTAREDASRPKYYVLEMF-PYPSGRIHMGHVRNYTIGDVIARFKRAKG 69

Query: 159 YEV 161
           + V
Sbjct: 70  FNV 72


>gi|196229356|ref|ZP_03128221.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196226588|gb|EDY21093.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 893

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 86/324 (26%), Gaps = 57/324 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFV--SANPTGPMHVGHCRCAVVGDTLASLMAF 156
            K     +  G            +     V    N TG + +GH     + D L+     
Sbjct: 15  AKWYDYWLQHGCFTADPSRVSAQRPAYSIVIPPPNVTGVLTLGHVLNNTIQDILSRRARM 74

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G                           ++ L+   +D        V  K + KE A K
Sbjct: 75  QG---------------------------KEVLWLPGTDHAGIATQNVVEKTLRKEGAMK 107

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           +     +   E  +  + ++  +    II   LK L    D               +  +
Sbjct: 108 HRD---DLGREALVAKIWEWK-EKYGGIIIQQLKKLGASCDWSRERFTMDPEYSKCVSRV 163

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
             +L ++G +Y G         +     D +  +             + ++ G++   A 
Sbjct: 164 FVDLYKKGLIYRGKRMVNWCPASLTALSDEEVEMKPQNGFMYHFKVEVAEAPGTWLTIAT 223

Query: 337 --------DLAYFKCKYERGFDNMIYVMGSDHSGYVKRL--------EAVAAAVSEKKAQ 380
                   D A      +  + ++I         +VKR         + +   V +    
Sbjct: 224 TRPETIPGDTAVAVNPKDPRYTHLI-------GKHVKRPLPVQIPDEQKLIPIVGDDHVD 276

Query: 381 INVLLCEL-VRLYRDGMPIKMSKR 403
                  L V    D    ++  R
Sbjct: 277 FEFGTGVLKVTPAHDKADFEIGLR 300


>gi|166155387|ref|YP_001653642.1| valyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|259516944|sp|B0BBT3|SYV_CHLTB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165931375|emb|CAP06948.1| valyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 939

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 61/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKRRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|163743397|ref|ZP_02150777.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383391|gb|EDQ07780.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 857

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y++P    +   +   +GI   +    K     +E     P+G +H+GH R   +GD +A
Sbjct: 4   YVAPEIEARWQDAWEKAGIFQAKRSADKPKYYVLEMF-PYPSGKLHMGHVRNYTMGDVIA 62

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 63  RYKLSTGHSV 72


>gi|194364311|ref|YP_002026921.1| valyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|254783558|sp|B4SJ70|SYV_STRM5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|194347115|gb|ACF50238.1| valyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 942

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 55/214 (25%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      L         +  +  G+   + +     N TG +H+GH     + D L   
Sbjct: 9   DPKSFETDLYEAWEKAGHFKPSGTGEPYTILL--PPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  Q+   II   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIGKVWEWKQQSG-DIIERQMRRLGTSADWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|84029563|sp|Q983N4|SYI_RHILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 993

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 117/331 (35%), Gaps = 40/331 (12%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPIR 274
             L    + +++P      ++AM++   D +    +A  +   +F  ED     D +  +
Sbjct: 494 RALKAIDDTRFVPAAGQNRIRAMIEERPDWVLSRQRAWGVPIAVFADEDGNVLKDEAVNQ 553

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            I+D    +G          K +     D  + + +     V  D         GS   F
Sbjct: 554 RIMDAFEEEG-ADAWFAAGAKERFLGNHDASKWKQVMDILDVWFDS--------GSTHVF 604

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLY 392
                  + + +  +   +Y+ GSD   G+      +  +   + +A  + ++     + 
Sbjct: 605 T-----LEDRPDLKWPADVYLEGSDQHRGWFHSS--LLESCGTRGRAPYDTVVTHGFTMD 657

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ +  + V+ + G+D +R  ++    +     D    K   + N   
Sbjct: 658 EDGR--KMSKSLGNTVVPQDVIKQSGADILRLWVV----TTDYWEDQRLGKNVLQTNID- 710

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY + R+  R         D +  P   +P+       E  ++  LAE   V+   
Sbjct: 711 ----AYRKLRNTIRWMLGTLAHDDGETVPLEAMPEL------ERLMLHRLAELDEVVRQG 760

Query: 513 TIAQEPYKLAFYLYD-LASVFHGHWSHGREN 542
             A E  ++   L D +       +   R++
Sbjct: 761 YDAFEFKRITRALVDFMVVELSAFYFDIRKD 791


>gi|91977188|ref|YP_569847.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683644|gb|ABE39946.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 514

 Score = 44.1 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 99/325 (30%), Gaps = 36/325 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA      G +V      ++ G ++   A             
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQTAQKEGIETHVLAAR 75

Query: 192 NDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           N     +     GV      +   +++   +      K +    D  + +         +
Sbjct: 76  NAGRFRDMDDRFGVSYDRFIRTSEEQHHRSVQEVW--KRMQANGDIYLDSYAGWYSVRDE 133

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCDMDRKQ 308
           A   + +  + ED+  RG      + ++  +   +   Y+  L             D ++
Sbjct: 134 AYYAEDETIVGEDNVRRGPQGSPVEWVEEKSYFFKLSAYQDRLLKLYEDQPDFIGPDSRR 193

Query: 309 LLFRSTMVGDDVDRPLLKS--------------------DGSYTYFA----ADLAYFKCK 344
               S + G   D  + ++                    D    Y       D      +
Sbjct: 194 NEVISFVKGGLKDLSVSRTTFDWGVEVPGDPEHVMYVWVDALTNYITGVGFPDETDANWR 253

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           Y    D  ++V+G D    + R  AV        A I V        +      KMSK  
Sbjct: 254 Y-WPAD--VHVIGKD----IIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKGEKMSKSV 306

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +   ++ D+ G D VR+  L  
Sbjct: 307 GNIVDPFNLADQYGVDQVRYFFLRE 331


>gi|307609730|emb|CBW99241.1| isoleucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 931

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 74/242 (30%), Gaps = 28/242 (11%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD---DVDRPLLKSDGSYTYFAADLAYF 341
            +    +   KS      D+D  +LL       D   D     L S G   Y        
Sbjct: 491 LIERVAMMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDS-GISHYSV-----L 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K   +  F   +Y  GSD   G+       A A+        VL         D    K+
Sbjct: 545 KHNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGY---TVDAEGKKL 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY R
Sbjct: 602 SKSKGNYVALDKLVNQHGADILRLWVASTDYRHEVSISEEIIKRNAD---------AYRR 652

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY 519
            R+  R       D +      + I  +   +     L    L +    I  A      +
Sbjct: 653 IRNTARFLLANLFDFN---PASDCIEAKELLELDRWALKRCQLLQ--EEIITAYENYHFH 707

Query: 520 KL 521
            +
Sbjct: 708 LI 709


>gi|289167689|ref|YP_003445958.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907256|emb|CBJ22091.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 665

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G D   +    +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWFDALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DIKLPERLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|259418678|ref|ZP_05742595.1| glutamyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259344900|gb|EEW56754.1| glutamyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 466

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 88/290 (30%), Gaps = 41/290 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +  +   + +PTG +H+G  R A+     A      G +        D          ++
Sbjct: 3   QPVVTRFAPSPTGFLHIGGARTALFNWLYAR---GRGGKFLLRIEDTDRARSTPEATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    ++D ++   +        V  +L  +       F  +  +   ++ +    
Sbjct: 60  LQGMAWLGLDHDGEVVSQFEGAARHAEVAHQLLAE-GKAYKCFSTQDEIADFREAAKAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              +           D   SE   H   P  IR                +  PK   T  
Sbjct: 119 KSTLFHSP-----WRDTPESE---HPDAPFAIR----------------IKAPKDGETTI 154

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  +  ++  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 155 RDEVQGDVTIKNAQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R   +  A+        V +   + L       K+SKR G      
Sbjct: 207 MNAARQMMIYEAMGWD-----VPVYAHIPLIHGSDGKKLSKRHGALGAQE 251


>gi|251791283|ref|YP_003006004.1| valyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539904|gb|ACT08525.1| valyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 951

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N        +I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPHDIEQPLYEHWEKQGYFKPNGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|90419972|ref|ZP_01227881.1| isoleucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336013|gb|EAS49761.1| isoleucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 1008

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 86/264 (32%), Gaps = 29/264 (10%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-----DRPLLKSDGSYTYFAADLAY 340
           V   IL    ++       D  +  F              D   +  D   T+       
Sbjct: 565 VNARILEAFAAEGADAWFADGAKERFLGNEHDAGKWTMVRDILDVWFDSGSTHAF----C 620

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + + +  +   +Y+ GSD   G+       +     +     VL    V    D    K
Sbjct: 621 LEKRPDLKWPADLYLEGSDQHRGWFHSSLLESCGTRGRAPYDAVLTHGFVM---DEEGRK 677

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +T + V+ + G+D +R  ++          D    K   + N       +Y 
Sbjct: 678 MSKSLGNVVTPQEVIKQSGADILRLWVVS----SDYSEDLRLGKTILQTNID-----SYR 728

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           + R+  R         + +  P   +P+       E  ++  LAE   ++     + +  
Sbjct: 729 KLRNTLRWMLGTLSHDEGETVPLAEMPEL------ERLMLNRLAEIDEIVRKGYDSFDFK 782

Query: 520 KLAFYLYD-LASVFHGHWSHGREN 542
           +++  L D +       +   R++
Sbjct: 783 RISRTLLDFVVVELSAFYFDIRKD 806



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 49/178 (27%), Gaps = 14/178 (7%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R       K  +        G +H+GH    V+ D +       GY+     Y+      
Sbjct: 60  RRESAGRPKYVLHDGPPYANGNLHIGHALNKVLKDVITRSFQMRGYDA---NYVPGWDCH 116

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              +   +  +Y+    N D ++P   +     +        + + E      E      
Sbjct: 117 GLPIEWKIEEQYRAKGKNKD-EVPVNEFRKE-CRDFAAHWVGEQTEEFRRLGVEGDFKDP 174

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEG 289
                     +I  +L    +           +RG    +  +++   LA     Y  
Sbjct: 175 YLTMAYGAESVIAGELLKFAMSG-------QLYRGSKPIMWSVVEKTALAEAEVEYHD 225


>gi|56461050|ref|YP_156331.1| valyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821717|sp|Q5QY15|SYV_IDILO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56180060|gb|AAV82782.1| Valyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 949

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 61/216 (28%), Gaps = 35/216 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP+ + + L         +     GKG   +I     N TG +H+GH     + DTL 
Sbjct: 4   TYSPAAIEQDLYQQWEDKGYF--KPSGKGDPYSIMIPPPNVTGSLHMGHAFQHTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 62  RYQRMDGLNTLWQVGSDHAGIATQMV-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA +          + ++  + ++  Q+    I   ++ L    D          G   
Sbjct: 91  QLAAQ-GQTRQELGRDAFIDKIWEWKEQSG-GTITQQMRRLGDSVDWDRERFTMDEGLSD 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R++   L     +Y G          Q    D +
Sbjct: 149 AVREVFVKLHEDNLIYRGKRLVNWDPALQTAISDLE 184


>gi|325695442|gb|EGD37342.1| glutamate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E  F           I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINE--FLGMSEDEKAAYIAKREAAGIIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM +  + F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGDIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|258544244|ref|ZP_05704478.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520482|gb|EEV89341.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 923

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 22/194 (11%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+  Y     A  + + + G+   +Y+ GSD   G+         A+        +L   
Sbjct: 539 GTTHY-----AVLRQRDDIGYPADLYLEGSDQHRGWFHSSLLTGCAIDGHPPYKGLLTHG 593

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                 D    KMSK  G+ +  + V++ +G+D +R  +     S  +      +K+++ 
Sbjct: 594 F---TVDESGRKMSKSLGNVVEPQKVINNLGADILRLWVSSADYSAEVSLSDNILKQRAD 650

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                    AY R R+  R       D D     ++ +P +         +    A   +
Sbjct: 651 ---------AYRRIRNTCRFLLANLHDFD---PTKHAVPTDELLALDRYAIARADA-LQK 697

Query: 508 VIENATIAQEPYKL 521
            I  A    E + +
Sbjct: 698 TIIAAYENYEFHLI 711


>gi|308233943|ref|ZP_07664680.1| leucyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943955|ref|ZP_08241420.1| leucine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491924|gb|EGF23698.1| leucine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 885

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             + +      +      +  +      K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 15  DAAQIETKWQKVWEQNKSFATDTKKDCPKKYVLEMFPYPSGDLHMGHARNYTIGDVMARQ 74

Query: 154 MAFSGYEV 161
               G++V
Sbjct: 75  ARMRGFDV 82



 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 14/155 (9%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           Y+ G +H+     Y +    V   +           LLC+   + RD     MSK  G+ 
Sbjct: 580 YIGGIEHAILHLLYSRFWTKVMRDLGLCSIDEPFTNLLCQG--MVRDEHGDTMSKSKGNV 637

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    V++  G+D++R  +L+    E  DFD+     +  +    +++ A+         
Sbjct: 638 VPPSSVIEPFGADTLRLAILFIAPPEK-DFDWD---TEVVQGTNRFLKRAWRLAWQFVFA 693

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           A+D    L   + P + + + +    +E +LI  L
Sbjct: 694 ARDAG--LSTTIVPNDSVLEHTNLTHAEQELIRAL 726


>gi|261856811|ref|YP_003264094.1| isoleucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837280|gb|ACX97047.1| isoleucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 985

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 17/159 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +       A+        VL         D    KMSK  G+ +  +
Sbjct: 602 LYLEGSDQHRGWFQSSLLTGVALKGAAPYRGVLTHGF---TVDAQGRKMSKSLGNVVAPQ 658

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D++G+D +R  +     S  +     ++ +++ +        AY R R+  R     
Sbjct: 659 KVIDKMGADVLRLWVASTDFSGEMTVS-DEILQRAGD--------AYRRIRNTARYLLAN 709

Query: 472 FPDLDFD---LFPRNVIPQESEFDTSELQLIVH-LAEYP 506
             D D +   +   +++P ++        L    LA++ 
Sbjct: 710 INDFDPNTDCVANEDLLPLDAWLLDHAAGLHQAVLADFE 748


>gi|166154512|ref|YP_001654630.1| valyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|301335772|ref|ZP_07224016.1| valyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|259516800|sp|B0B7L8|SYV_CHLT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165930500|emb|CAP03994.1| valyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
          Length = 939

 Score = 44.1 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 61/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      + S       +  N   +    +I     N TG +H+GH     + DTL   
Sbjct: 11  DPKSSETGVYSFWERSGMFVANASSEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T+                               V + L
Sbjct: 71  KRMQGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E++L  V D+  ++   +I   L+ L    D          G    +
Sbjct: 100 KASLGKRRTDFSREEFLKHVWDWKEKS-QNVILSQLRQLGCSCDWSRQRFTMDPGANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G +Y G          Q    D +
Sbjct: 159 KKAFKILFDKGVIYRGYYLVNWDPILQTALADDE 192


>gi|317489666|ref|ZP_07948170.1| leucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316911260|gb|EFV32865.1| leucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 859

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       + +        K  K  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  RWQKEWDDADLYKVTEDPSKPKKYVLEMF-PYPSGDIHMGHVRNYTIGDVVARYYKMRGF 72

Query: 160 EV 161
           +V
Sbjct: 73  DV 74


>gi|261880836|ref|ZP_06007263.1| glutamate-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332452|gb|EFA43238.1| glutamate-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 508

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 102/290 (35%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTGP+H+G  R A+     A     +G  V R     D+   +   
Sbjct: 1   MSERKVRVRF-APSPTGPLHIGGVRTALFNYLFAR--QHNGDLVFRIE-DTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   +Q      D  +  G   G Y +   +++  KY  +L++            + 
Sbjct: 57  EEYILEAFQWLGIKFDEGVSFGGEHGPYRQSERRDIYKKYVKQLIDNG-----KAYYAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               +   R+++     Q+D   S     R   +  R   ++L   G  Y         +
Sbjct: 112 TPEELAKKREEVSNF--QYD--ASTRMQMRNSLALERAEWEHLITDGTQYTVRFKVEPGQ 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R  +  +S ++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 EIVVNDMIRGDVHVKSDILD---DKVLYKSVDDLPTYH---LANIVDDHLMEISHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   ++         L+ L  +G   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYKAFGWEETMPAFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|257466670|ref|ZP_05630981.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917824|ref|ZP_07914064.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691699|gb|EFS28534.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 854

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
               +K         +  G N +       +  +   P+G +HVGH R   +GD +A   
Sbjct: 9   KEVEKKWQERWEKDQVFKGSNAVEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYK 68

Query: 155 AFSGYEV 161
              GY V
Sbjct: 69  RMKGYNV 75


>gi|256827893|ref|YP_003156621.1| glutamyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577069|gb|ACU88205.1| glutamyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 464

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 92/290 (31%), Gaps = 53/290 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            +PTG +H+G  R A+             Y   R+      G  I  +  +   R  Q +
Sbjct: 10  PSPTGYLHIGGARTALF-----------NYLYARQN----GGKFILRIEDTDQARSTQEM 54

Query: 190 YNNDSD----LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            +   D    L   +  G Y +    +L + Y  +L+   +  +        V+AM +  
Sbjct: 55  TDAIIDAMHWLGLDFDEGPYFQSERGDLYNSYVDKLVETGK-AYYCSCTSEEVEAMRETA 113

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R     L  +++    E     G                    G +   K+  T K   D
Sbjct: 114 RA--AGLKPKYNGKCRELGLGPG-------------------PGRVVRFKTPLTGKVVFD 152

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
                  S  V +  D  + ++DGS  Y    +A      E G  +++   G DH     
Sbjct: 153 DAIKGPISWDVQEMDDFVIRRADGSAIY---QMAVVVDDAEMGVTHVLR--GDDHQNNTP 207

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
           +   +  A+              V +       KMSKR G    +  + +
Sbjct: 208 KQILIYEALGFPLPTFGH-----VPMILGSDKKKMSKRHGATSVMMYKDL 252


>gi|118595221|ref|ZP_01552568.1| isoleucyl-tRNA synthetase, class Ia [Methylophilales bacterium
           HTCC2181]
 gi|118440999|gb|EAV47626.1| isoleucyl-tRNA synthetase, class Ia [Methylophilales bacterium
           HTCC2181]
          Length = 925

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 15/136 (11%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A++EK     +L    V    DG   KMSK  G+ I  +
Sbjct: 559 LYLEGSDQHRGWFQSSLLTSCAINEKAPFKALLTHGFVV---DGKGYKMSKSKGNVIAPQ 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++D+ G+D +R  +     S  L+    ++ ++  +N        Y R R+  R     
Sbjct: 616 KIMDQYGADILRLWVATTDYSAELNVS-DEILKRVSDN--------YRRIRNTLRFLCAN 666

Query: 472 FPDLD--FDLFPRNVI 485
             D D   DL   + +
Sbjct: 667 LEDFDSRKDLVSSDAL 682


>gi|87200047|ref|YP_497304.1| glutamyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|115305752|sp|Q2G6Q3|SYE2_NOVAD RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|87135728|gb|ABD26470.1| glutamyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 487

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 125/406 (30%), Gaps = 64/406 (15%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
                +   + +PTG +H+G  R A+     A      G  + R     D     +    
Sbjct: 14  PRDKVVTRFAPSPTGFLHIGGARTALFNWLYAR--HHGGTYLLRIE-DTDRARSTDAAID 70

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++F   +      D      +        V  +L +   +      +E+     +    Q
Sbjct: 71  AIFDGLEWLGLGGDEPAVFQFARSDRHAEVAHKLLEAGHAYRCYLTQEELAA--RRELAQ 128

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A  +  R D +  +   D + ++  +           +  +             P+   T
Sbjct: 129 AERRPFRIDSEWRDATPDQWPADQSY-----------VVRMKA-----------PREGET 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  +  +  +++ + D +   +L+SDG+ TY    LA     ++ G  ++I   G D
Sbjct: 167 TIVDKVQGSITVQNSELDDFI---ILRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDD 218

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG- 418
           H     R   +   +   +      +   + L       K+SKR G  + +    DE+G 
Sbjct: 219 HINNAFRQLVIIRGMHAIEGGWPDPVYAHIPLIHGADGAKLSKRHG-ALGVDAYRDEMGL 277

Query: 419 ------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE--NPVF 452
                                     +V +  +   N     FD  K+   +        
Sbjct: 278 LPEAVFNYLLRLGWGHGDEEIISREQAVAWFDIGDVNKGASRFDLKKLLNLNGHYIREAD 337

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQ 497
             + A      +   A    PD   DL  R + + +    D +EL 
Sbjct: 338 DARLAALVAPRLATLAPGFAPDKGLDLLTRAMPVLKVRAADINELA 383


>gi|332360031|gb|EGJ37845.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREAAGVIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|220906506|ref|YP_002481817.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219863117|gb|ACL43456.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 1242

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 114/311 (36%), Gaps = 31/311 (9%)

Query: 204 VYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           V ++ + ++ LAD        F  E+W  + +D+ V      I   L     Q   + + 
Sbjct: 375 VKIEPLAQQALADLDQQNSPQFVPERWAKVYRDWLVNLKDWCISRQLW-WGHQIPAWYAI 433

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            +           I+    R+    E  +     +   + D D     F S +       
Sbjct: 434 SETGGDITDHTPFIVAGNERE--AREQAIAQFGPEVQLEQDPDVLDTWFSSGL------- 484

Query: 323 PLLKSDGSYTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
               S   +     DL ++        GFD +I+         V R+  +    +     
Sbjct: 485 -WPFSTLGWPDRTEDLDFYYPTSTMVTGFD-IIFFW-------VARMTMMGKHFTGTMPF 535

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
            +V +  LV   RD    KMSK AG+ I    ++D+ G+D++R+ ++        D    
Sbjct: 536 GDVYIHGLV---RDENNKKMSKTAGNGIDPLLLIDKYGADALRYTLIREVAGAGQDI--- 589

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +++   K +    V+ +      ++  ++ +  +LD     +   P  ++ + ++  +  
Sbjct: 590 RMEYNRKTDESATVEASRNFANKLWNASRFVMLNLDGHTPAQLGFPNLADLELADRWI-- 647

Query: 501 HLAEYPRVIEN 511
            L+ Y +V++ 
Sbjct: 648 -LSRYQQVVQQ 657


>gi|167969772|ref|ZP_02552049.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
          Length = 808

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 382 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 431

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 432 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 489

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 490 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 533

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L E    +++A    E  +    LY  A   F   +        
Sbjct: 534 PSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 585

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 586 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 611


>gi|126465030|ref|YP_001040139.1| leucyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|189083155|sp|A3DKS1|SYL_STAMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126013853|gb|ABN69231.1| leucyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 969

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  S  +   I   R    K  K  I         P+H+GH R   +GD +A      G
Sbjct: 15  AKWQSKWMEKKIFEPRIEPDKP-KYFITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLRG 73

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++I   G  I  ++  +    ++ +    S      Y   Y+K        +
Sbjct: 74  YNVLFPMAFHI--TGTPIIAISERISRGEEEIINRYKS------YIAKYVKDPV-----E 120

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPI 273
               + +F +   L +     V         D  AL    D       FH G+P   + +
Sbjct: 121 IEKIIESFKDPLNLAVFFAERVHM-------DFDALGYSID---WRRRFHTGEPIYNAFV 170

Query: 274 RDIIDNLARQGYVYEG 289
                 L  +G +  G
Sbjct: 171 TWQFLKLREKGLIKRG 186


>gi|83720304|ref|YP_441326.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618175|ref|ZP_02386806.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767710|sp|Q2T0H3|SYI_BURTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83654129|gb|ABC38192.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 85/253 (33%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+    ++ +P E   +     +    A+    +
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDY---AKDALPAEQWLEIDRYAVAFS-AQLQAEL 719

Query: 510 ENATIAQEPYKLA 522
                  E + + 
Sbjct: 720 LAHYEKYEFHPVV 732


>gi|161505037|ref|YP_001572149.1| valyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160866384|gb|ABX23007.1| hypothetical protein SARI_03168 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 951

 Score = 44.1 bits (103), Expect = 0.065,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++    I   ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESG-GTITHQMRRLGNSVDWERERFTMDEGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|41408369|ref|NP_961205.1| valyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81413876|sp|Q73XN8|SYV_MYCPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41396725|gb|AAS04588.1| ValS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 882

 Score = 44.1 bits (103), Expect = 0.065,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +    V    +  N        +I     N TG +H+GH     + D L   
Sbjct: 16  DPPAAEYAIYRQWVDAGYFTANPASDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV  +  ++ AG                                V  K +  + 
Sbjct: 76  KRMQGYEVLWQPGMDHAGI---------------------------ATQSVVEKQLAVD- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 108 ----GKTKEDFGRELFIEKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R I   L   G +Y        S   Q    D
Sbjct: 163 RTIFKRLYDAGLIYRAERLVNWSPVLQTALSD 194



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 27/185 (14%)

Query: 363 YVKRLEAVAAAVSEKKA---------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V R+      V +  A         Q+      L  L RD    KMSK  G+ I     
Sbjct: 494 WVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDW 553

Query: 414 VDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           VD  G+D++RF +         L      V+                  R+   +  +  
Sbjct: 554 VDMFGADALRFTLARGASPGGDLAIGEDHVRAS----------------RNFCTKLFNAT 597

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SV 531
                +      +P   E   ++  ++  L E    +++A    E  +    LY  A   
Sbjct: 598 RYALLNGAQLAELPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSRACESLYHFAWDE 657

Query: 532 FHGHW 536
           F   +
Sbjct: 658 FCDWY 662


>gi|327468462|gb|EGF13947.1| glutamate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.065,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREAAGIIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|124516589|gb|EAY58097.1| Isoleucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 976

 Score = 44.1 bits (103), Expect = 0.065,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 74/199 (37%), Gaps = 23/199 (11%)

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           LA  K K +  +   +Y+ GSD   G+       + A+ +      VL    V    DG 
Sbjct: 556 LAVLKDKSDTHWPADLYLEGSDQHRGWFHSSLLTSMALFDTPPYRQVLTHGFVV---DGQ 612

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK   + I+   ++++ G++ +R         E +      +  Q  E        
Sbjct: 613 GRKMSKSLKNVISPLEIINKYGAEILRLWAASSDYQEDIRLS-ELILSQLVE-------- 663

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP---RVIENAT 513
           +Y + R+ FR       DL  D   +N+   E   D  +  +   L+ +      I  + 
Sbjct: 664 SYRKIRNTFRFVVSNLSDLPEDESRQNLWVPEQSPDILDQWI---LSLWETTKEKIFQSY 720

Query: 514 IAQEPYKLAFYLYDLASVF 532
            A E  +++     LA  F
Sbjct: 721 NAYEFSRISQ----LAGQF 735


>gi|46445878|ref|YP_007243.1| glutamyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|67461778|sp|Q6MEN1|SYE_PARUW RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|46399519|emb|CAF22968.1| probable glutamate-tRNA ligase (= glutamyl-tRNA synthetase)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 502

 Score = 44.1 bits (103), Expect = 0.065,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 94/289 (32%), Gaps = 52/289 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR--- 184
           ++ +PTG  HVG    A+     A              + N  G  I  +  +   R   
Sbjct: 7   IAPSPTGDPHVGTAYMALFNMIFAR-------------HYN--GTFILRIEDTDRARSRP 51

Query: 185 -YQQALYNN--------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            Y++ +Y+         D     G   G Y +    ++  +Y+ ELL+          K 
Sbjct: 52  EYEENIYSALKWANIQWDEGPDIGGAYGPYRQSERFDIYKQYAEELLSKG-----KAYKC 106

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +   A +  +R+                 + R       D I    +    Y   L  P 
Sbjct: 107 FCTAAELDEMRELSAKQG-------GRQGYDRRCRHLTPDEIIEREQAELSYVIRLKVPL 159

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
           +      D  +K++ F      D  D+ LLKSDG  TY    LA     Y     ++I  
Sbjct: 160 NGECVYEDAIKKRMTFP---WADIDDQVLLKSDGFPTYH---LANVVDDYLMKISHVIR- 212

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            G +      +   +  +           L   + L +DG   K+SKR 
Sbjct: 213 -GDEWMSSTPKHILLYESFGWTPPTF---LHMPLLLGKDGK--KLSKRK 255


>gi|311113646|ref|YP_003984868.1| leucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945140|gb|ADP41434.1| leucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 831

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +G+        KG +  ++     P+G +H+GH     +GD  A      G
Sbjct: 21  AKWRPYWEETGVFKPTGNAAKGRRYVLDMF-PYPSGDLHMGHAEAFAIGDMNARYYKQCG 79

Query: 159 YEV 161
           Y+V
Sbjct: 80  YDV 82


>gi|257784636|ref|YP_003179853.1| leucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473143|gb|ACV51262.1| leucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 857

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               +      I      Y         K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 19  DAEAIETKWQRIWEEQNLYKTEEDSSRPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQ 78

Query: 154 MAFSGYEV 161
               G++V
Sbjct: 79  ARMRGFDV 86


>gi|217969623|ref|YP_002354857.1| leucyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506950|gb|ACK53961.1| leucyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ L         S   +         K     +   P+G +H+GH R   +GD LA   
Sbjct: 7   PAALETAAQQHWDSTDAFRVTEDASRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFH 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMKGYNV 73


>gi|218680715|ref|ZP_03528612.1| leucyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 499

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 17  RDAEPRWQQKWNEDKVFETDNSDPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 75

Query: 155 AFSGYEV 161
              GY V
Sbjct: 76  RARGYNV 82


>gi|120602905|ref|YP_967305.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231603|sp|A1VEL2|SYL_DESVV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120563134|gb|ABM28878.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 829

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       SGI        K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 11  RWQKKWEDSGIFQCDTEADKPKYYVLEMF-PYPSGNIHMGHVRNYSIGDVVARFKRMQGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81786425|sp|Q9K9V0|SYI_BACHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 921

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 115/350 (32%), Gaps = 74/350 (21%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           + +  ELL    E KW+P   +  +  M++  R D      +   +   IF  E     G
Sbjct: 415 ENFRDELLRAIQEVKWVPEWGETRLYNMVRD-RGDWCISRQRVWGVPIPIFYGE----NG 469

Query: 269 DPSPIRDIID---------------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           +P    + I+                   +  + EG             +MD   + F S
Sbjct: 470 EPIITDETINHVSELFRKHGSNVWFEWETKDLLPEGFTHESSPNGQFTREMDIMDVWFDS 529

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAA 372
              G      L++               + + +R  D  +Y+ GSD   G+     + + 
Sbjct: 530 ---GSSHQGVLVE---------------REELDRPAD--LYLEGSDQYRGWFNSSLSTSV 569

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +      
Sbjct: 570 AITGKAPYKGVLSHGF---TLDGEGKKMSKSLGNVVIPNDVMKQLGADILRLWVASVDYQ 626

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +     K+ +Q  E         Y + R+ +R       D       R  I Q +  D
Sbjct: 627 ADVRVS-DKILKQVSE--------VYRKIRNTYRFLLGNLHDFHPATH-RVAIDQLNGLD 676

Query: 493 TSELQLIVHLAEYPRV---IENATIAQEPYKLAFY--LYDLAS-VFHGHW 536
                    LA+   V   ++ A    +   +  Y  L++  +      +
Sbjct: 677 RY------MLAKLNDVINRVKKAYDEYQFSTV--YHELHNFCTIELSSFY 718


>gi|313199869|ref|YP_004038527.1| valyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439185|gb|ADQ83291.1| valyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 948

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 84/335 (25%), Gaps = 72/335 (21%)

Query: 93  LSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             P  L         S G         K     I     N TG +H+GH     + D L 
Sbjct: 16  FDPKALESKWYQFWESRGYYAAGMDASKSDNFCILLPPPNVTGTLHMGHGFNQTIMDALT 75

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G     +   + AG   QI                                  V
Sbjct: 76  RYHRMRGDNTLWQPGTDHAGIATQI----------------------------------V 101

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +   D       +   EK+L  V ++  +     I   ++ L    D          G 
Sbjct: 102 VERQLDAQGVSRHDLGREKFLEKVWEWK-EYSGGTITQQMRRLGTSPDWSRERFTMDAGL 160

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + +    L  +G +Y G       K     D+     +    +V D+ D  +     
Sbjct: 161 NKVVTESFVRLYNEGLIYRG-------KRLVNWDVKLGTAVSDLEVVQDEEDGSM----- 208

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCEL 388
                                  I    +D SG++         +  +    ++      
Sbjct: 209 ---------------------WHINYPLADGSGHLTVATTRPETMLGDVAVMVHPEDERY 247

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             L    + + +  R    I   +V  E G+  V+
Sbjct: 248 AHLIGKAVKLPLCDREIPIIADDYVDREFGTGVVK 282


>gi|161525046|ref|YP_001580058.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350211|ref|YP_001945839.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|160342475|gb|ABX15561.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334233|dbj|BAG43303.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 955

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + +      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIEAQWGPEWEKRGYAAPAFDPARPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D LA             Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLAR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   E+++  V ++  ++    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREQFVERVWEWKQKSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D + +          +  PL+  
Sbjct: 152 KMSAAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            GS T           D+A      +  + ++I
Sbjct: 212 SGSLTVATTRPETMLGDVAVMVHPEDERYRHLI 244


>gi|114330617|ref|YP_746839.1| valyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314389|sp|Q0AIF2|SYV_NITEC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|114307631|gb|ABI58874.1| valyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 917

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 57/217 (26%), Gaps = 37/217 (17%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P  +     S+  +   +      +     I     N TG +H+GH     + D L  
Sbjct: 7   FDPKDIENHWYSVWETAGYFSPAKREEVNAYCIMLPPPNVTGTLHMGHAFQHTLMDALIR 66

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G     +   + AG   QI                                  V 
Sbjct: 67  YHRMLGDNTLWQPGTDHAGIATQI----------------------------------VV 92

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +   D+   +      E +L  V  +  ++   I R  ++ +    D             
Sbjct: 93  ERQLDQEGKDRRQMGREAFLERVWQWKEESGSTITRQ-MRRMGTSCDWSRERFTMDEVLS 151

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + ++   L R+G +Y G          Q    D +
Sbjct: 152 RAVTEVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLE 188


>gi|114330518|ref|YP_746740.1| glutamyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314474|sp|Q0AIP6|SYE_NITEC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|114307532|gb|ABI58775.1| glutamyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 463

 Score = 44.1 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 61/289 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF------ 182
           + +PTG +H+G  R A+     A                     Q     L +       
Sbjct: 7   APSPTGYLHIGGARTALFSWAFAR-------------------KQGGKFILRIEDTDLER 47

Query: 183 --WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
              +  QA+ +  + L   Y  G Y +        + +  LL           K+  + A
Sbjct: 48  STQQSVQAILDGMAWLGLDYDEGPYYQMQRLSRYQEVAELLLKQGLAYRCYASKEE-LDA 106

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGY-VYEGILPPPKSKT 298
           + +  R  L  L  ++D      D  +  P+ +  ++     R+GY V++ ++    +  
Sbjct: 107 LREQQR--LAGLKPRYD--GRWRDSKQTPPAGVTPVVRFKTPREGYAVFDDLVKGRIAVA 162

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             + D                 D  L++SDG+ TY    +       + G  ++I   G 
Sbjct: 163 NHELD-----------------DLVLMRSDGTPTYNFGVV---LDDLDMGVTHVIR--GD 200

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           DH     R   +  A+        +     V +       ++SKR G  
Sbjct: 201 DHVNNTPRQINILKALGA-----IIPQYAHVPMILGADGERLSKRHGAV 244


>gi|330448740|ref|ZP_08312387.1| valyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492931|dbj|GAA06884.1| valyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 953

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|296118756|ref|ZP_06837332.1| valine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968245|gb|EFG81494.1| valine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 907

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 32/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   L    V    +  +        +I     N TG +H+GH     + D++    
Sbjct: 22  PQAVESALYEGWVEKGYFKPDEDPDKEPFSIVLPPPNVTGQLHMGHALDHTLMDSIIRRK 81

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY               +   ++   + +  L   +      Y    ++  V  E  
Sbjct: 82  RMQGYSAL-------WLPGYDHAGIATQTKVEARLKETEGKSRWDYEREEFINKV-WEWK 133

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D+Y                         K I   +KA+    D          G    ++
Sbjct: 134 DEYG------------------------KTITSQMKAIGDSVDWSRERFTLDDGLSRAVQ 169

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            I   L   G +Y+       S   +    D
Sbjct: 170 TIFKQLFDAGMIYQANRLVNWSPVLETAVSD 200


>gi|257094627|ref|YP_003168268.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047151|gb|ACV36339.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 879

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
              SG         +     +      P+G +H+GH R   +GD LA      GY V
Sbjct: 26  WTSSGAARASEDPKRPKYYCLSMF-PYPSGKLHMGHVRNYTIGDVLARFHRMLGYNV 81


>gi|297559883|ref|YP_003678857.1| isoleucyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844331|gb|ADH66351.1| isoleucyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 1066

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  DG   KMSK  G+ +    V+D  G+D++R+ ML   +     +   +V   + E  
Sbjct: 608 LAEDGR--KMSKHLGNVMEPIAVMDRHGADALRWFMLASGSP----WTARRVGHAALEEI 661

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           V  V   Y    S F    +     D  L      PQ+       L     L+E   V+ 
Sbjct: 662 VRKVLLTYHSTVSFFTLYANAGEGWDHSLLDSAPAPQDRPLLDRWL-----LSELNEVVR 716

Query: 511 NATI 514
           + T 
Sbjct: 717 DVTE 720


>gi|110833353|ref|YP_692212.1| valyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|122959655|sp|Q0VSA8|SYV_ALCBS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|110646464|emb|CAL15940.1| valyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 931

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +  +  G    + I     N TG +H+GH     + DTL    
Sbjct: 9   PDRIEQSWYENWEQAGHFKPSGQGDPFCIMI--PPPNVTGSLHMGHAFQDTIMDTLVRYR 66

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                    E    G           
Sbjct: 67  RMQGRNTLWQVGTDHAGIATQMVV-------------------ERKLAGE---------- 97

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               +       EK+L  V ++  ++   I R  L+ +    D          G  + +R
Sbjct: 98  ---GTNRHELGREKFLDKVWEWKRESGGTITRQ-LRRMGASVDWTRERFTMDDGLSNAVR 153

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L ++G +Y G               D +
Sbjct: 154 EVFVRLHKEGLIYRGKRLVNWDPALHTAISDLE 186


>gi|84489310|ref|YP_447542.1| valyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372629|gb|ABC56899.1| ValS [Methanosphaera stadtmanae DSM 3091]
          Length = 879

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 20/144 (13%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ +K    +++  +V    DG   KMSK  G+ I    V++E G+D++R         
Sbjct: 506 ALTGEKPFDEIVVNGMV-FGEDG--HKMSKSLGNVIAPEEVIEEYGADALRLWSANSVPG 562

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             + F +  +K                      R+  + F  +   L   NV    SE +
Sbjct: 563 ADVPFGWKDIK----------------HAYKFLRKFWNAFRFISMHL-DENVSDNLSENN 605

Query: 493 TSELQLIVHLAEYPRVIENATIAQ 516
             +  ++  L    + +  A    
Sbjct: 606 IIDKWILSKLNRLNQTVTQAFEEY 629


>gi|302336214|ref|YP_003801421.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320054|gb|ADK68541.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 534

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 35/245 (14%)

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKW--------------LPIVKDYSVQAMMKIIR 246
           Y G Y           ++   ++  +E+               L  V++ S    +   +
Sbjct: 119 YKGTYDGWYCVPDETYFTETQVSHADEERGTQGQHLCPDCGRPLERVQEESYFFRLSAFQ 178

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMD 305
           D L  L  +H  F+  D   R   S +   + +L+  +     GI  P   +       D
Sbjct: 179 DRLLRLYDEHPDFVMPDFRMREVRSFVEGGLQDLSVSRTSFDWGIPVPFDDRHVTYVWFD 238

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYV 364
                  +   G   D                 A F  ++   +     ++G D    + 
Sbjct: 239 ALLNYMTAVGFGQGTDEA--------------AAEFARRWPAQYH----MVGKDIIRFHC 280

Query: 365 KRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
               A+  A+ E     +      +V+    G   KMSK  G+ I    V+D +G +  R
Sbjct: 281 VIWPAMLMAIGEALPEHVFAHGFLMVKNEETGQGEKMSKSRGNAIAPEEVIDLLGVEGYR 340

Query: 424 FMMLW 428
           +  + 
Sbjct: 341 YYFMT 345


>gi|71894327|ref|YP_278435.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851115|gb|AAZ43724.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 765

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K     + +     +N      K  +      P+G +H+GH R   +GD +A     + +
Sbjct: 10  KWQKYWIENNSFEPKNDFSMPKKYVLSMF-PYPSGQLHMGHVRNYTIGDAIARYYRKNNF 68

Query: 160 EV 161
            V
Sbjct: 69  NV 70


>gi|54296958|ref|YP_123327.1| isoleucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822616|sp|Q5X6G6|SYI_LEGPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53750743|emb|CAH12150.1| Isoleucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 931

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 74/242 (30%), Gaps = 28/242 (11%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD---DVDRPLLKSDGSYTYFAADLAYF 341
            +    +   KS      D+D  +LL       D   D     L S G   Y        
Sbjct: 491 LIERVAVMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDS-GISHYSV-----L 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K   +  F   +Y  GSD   G+       A A+        VL         D    K+
Sbjct: 545 KHNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGY---TVDAEGKKL 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY R
Sbjct: 602 SKSKGNYVALDKLVNQHGADILRLWVASTDYRHEVSISEEIIKRNAD---------AYRR 652

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY 519
            R+  R       D +      + I  +   +     L    L +    I  A      +
Sbjct: 653 IRNTARFLLANLFDFN---PASDCIEAKELLELDRWALKRCQLLQ--EEIITAYENYHFH 707

Query: 520 KL 521
            +
Sbjct: 708 LI 709


>gi|71656320|ref|XP_816709.1| valyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881855|gb|EAN94858.1| valyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 975

 Score = 44.1 bits (103), Expect = 0.067,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 49/199 (24%), Gaps = 35/199 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
                +       SG     + +     G    I     N TG +H+GH     V DTL 
Sbjct: 15  KDVESEWYEWWEKSGFFRPASDLGRKHNGNTFVIVSPPPNVTGYLHLGHSLTGAVQDTLI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V K
Sbjct: 75  RFHRMKGDNTLYVPGTDHAGIATQVV-------------------------------VEK 103

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L  +      +   E++L  V D+  +    +I   L+ + +  D              
Sbjct: 104 RLLRESGKTRHDLGREEFLKRVWDFK-ENHAHVITRQLRQIGLSLDWTRERFTMDDHCAG 162

Query: 272 PIRDIIDNLARQGYVYEGI 290
            + +    L   G V    
Sbjct: 163 AVLEAFVKLHEDGLVRRST 181


>gi|332358085|gb|EGJ35917.1| glutamate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYCGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAKREAAGIIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|328949107|ref|YP_004366444.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449431|gb|AEB15147.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 510

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 63/333 (18%), Positives = 111/333 (33%), Gaps = 46/333 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  DTL   + F GY+      I D G                A    D  L
Sbjct: 38  HIGNLRAYVFLDTLDRTLTFLGYDKKHVMNITDIG-----------HLTGDADEGEDKML 86

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD-YSVQAMMKIIRDDLKALNIQ 255
                    +  V K   D + +++      +   + K    VQ M+++I    K +   
Sbjct: 87  KTAQERHQSVLEVAKFYTDAFFNDIDRLNIIRPDVVCKATEHVQDMIELI----KRIEAN 142

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LL 310
              ++S  + +  D +   D        G +    L   K+    + D +++      L 
Sbjct: 143 GHTYMSGGNLY-YDVTTYPD-------YGKLANLNLDDLKAGARIEVDQNKRNPYDFVLW 194

Query: 311 FRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG--YVK 365
           F  +   +     D P  +  G   +     A         FD  I+  G DH    +  
Sbjct: 195 FTKSKFENQALTWDSPWGR--GYPGWHIECSAMSMKYLGEHFD--IHTGGIDHIPIHHTN 250

Query: 366 RLEAVAAAVSEKKAQINVLLCELV-----RLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            +     A   K     +    LV     +    G   KMSK  G+F+TL+ ++D+ G +
Sbjct: 251 EIAQSEGATGHKWVNYWLHNEFLVIAKDKKAAESGQAEKMSKSHGNFLTLQSLIDK-GYN 309

Query: 421 SV--RFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            +  RF +L     + + F +  +         
Sbjct: 310 PLDYRFFLLGGHYRKQIYFSWDAMDSAKNSRTA 342


>gi|322376351|ref|ZP_08050844.1| methionine--tRNA ligase [Streptococcus sp. M334]
 gi|321282158|gb|EFX59165.1| methionine--tRNA ligase [Streptococcus sp. M334]
          Length = 665

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 106/346 (30%), Gaps = 71/346 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQSYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S  D      S + ++  + A     G    G      S+ +    + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLS 175

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------FDN 351
           + Q            D   +  DG               DLA  +  +  G        +
Sbjct: 176 KYQDRL-VDFFKAHPD--FITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKH 232

Query: 352 MIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYRD-- 394
           ++YV              G D  G   +     V   V +   + + +   ++ +  D  
Sbjct: 233 VVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIK 292

Query: 395 ------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                           KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 293 LPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|315928006|gb|EFV07326.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 516

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|306827914|ref|ZP_07461181.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429833|gb|EFM32875.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 666

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 108/333 (32%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I T A       Q  + N
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAKEAGITPQTYVDN 74

Query: 192 NDSDLPE-----GYYPGVYLK---HVGKELADKYSSELLNFPE------EKWLPIV-KDY 236
              D+             +++      +E+      +LL   +        W  +  +++
Sbjct: 75  MAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +K +  D     I           ++SE+ +          ++     +    + 
Sbjct: 135 FTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLVAFFKERPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 ++        +   + R    +   +  D      +  D    Y  A L Y   
Sbjct: 195 DGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALLNYATA-LGY-GQ 252

Query: 344 KYERGFDNMIY-----VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDG 395
                FD         ++G D    + R  ++      +         L+     + +DG
Sbjct: 253 ANHANFDKFWNGTVFHMVGKD----ILRFHSIYWPILLMMLDLPMPERLIAHGWFVMKDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|300172586|ref|YP_003771751.1| glutamyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299886964|emb|CBL90932.1| Glutamyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 498

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 95/298 (31%), Gaps = 34/298 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLALSV 181
           + +PTG +H+G+ R A+     A    ++G  + R           +   +Q++ LA   
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGKFIIRIEDTDTARNIADGEKSQLDNLAW-- 65

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                  L  +  + PE   PG Y        +++    L     ++ L     Y     
Sbjct: 66  -------LGLDWDESPEN--PGEY---GPYRQSERNEQGLYQPFIDELLAKGLAYKSYKT 113

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + I  + +A            ++                 QG         P+ K    
Sbjct: 114 TETIAAEREAQQAAKQAPHYVYEYEGLTSEEREAKYAEFEAQGLKAVVRFRVPEEKVYAW 173

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ +  +   +  VG   D  + K+DG  TY   + A     +     +++   G DH 
Sbjct: 174 DDIVKGHIEIGAKEVG--GDWVIQKTDGMPTY---NFAVVVDDHLMKISHVLR--GDDHV 226

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               +   +  A+     +       +  +       K+SKR  + +       E+G 
Sbjct: 227 SNTPKQIMIFEALGWNVPKFGH----MALIINGETGKKLSKRDENLLQFVEQYHELGY 280


>gi|296242280|ref|YP_003649767.1| leucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094864|gb|ADG90815.1| leucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 968

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 69/196 (35%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +G+   +    K  K  +        GP+H+GH R   +GD +A     +G
Sbjct: 18  AKWQKKWKEAGVFEPKVEESK-VKYFLTVPYPYTNGPLHIGHGRTYTIGDIIARFKRLTG 76

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++I   G  I  ++        + + N D+   + Y           E  +K
Sbjct: 77  YNVLFPMAFHI--TGTPIIAIS--------ERIANKDAKTLDMYR---SYISYYIEDREK 123

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPI 273
               L +F +   L       VQ+       D +AL    D       FH G+P   + +
Sbjct: 124 VEEILESFKDPLKLATFFAEKVQS-------DFEALGYSID---WRRKFHTGEPIYNAFV 173

Query: 274 RDIIDNLARQGYVYEG 289
               + L + G V +G
Sbjct: 174 TWQYNRLRQLGVVAKG 189


>gi|294054919|ref|YP_003548577.1| leucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614252|gb|ADE54407.1| leucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 859

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ G++H+     Y +    V   +           L  + + L  DG   KMSK  G+
Sbjct: 579 LYIGGAEHAVLHLLYARFWHQVLFDLGVVSDPEPFKKLFHQGIILGEDGE--KMSKSRGN 636

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            +    +++  G+D++R  ++
Sbjct: 637 VVNPETIIEGYGADALRCYLM 657


>gi|254564048|ref|YP_003071143.1| glutamate tRNA synthetase, catalytic subunit [Methylobacterium
           extorquens DM4]
 gi|254271326|emb|CAX27338.1| glutamate tRNA synthetase, catalytic subunit [Methylobacterium
           extorquens DM4]
          Length = 474

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 91/289 (31%), Gaps = 40/289 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A    F G  + R     D          ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR--RFGGRMLLRIE-DTDRERSTQGAIDAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    + D D+   +      + V + L    ++       E+    +++ +     
Sbjct: 61  DGMRWLGLDWDGDVIYQFARAERHREVAESLLASGNAYHCYASAEELTQ-MRETARAEGR 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               D         D   SE       P+ ++ +I            +  P + +T  + 
Sbjct: 120 APRYD-----GRWRDRDPSEA------PAGVKPVI-----------RLRAPSEGETVVED 157

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +  +          D  D  LL+SDG+ TY    LA     ++ G   +I   G DH  
Sbjct: 158 AVQGRVTW----ANRDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQVIR--GDDHLT 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+      +       + L       K+SKR G      
Sbjct: 209 NAARQSQIYRALGWDVPAMAH-----IPLIHGADGAKLSKRHGALGVEE 252


>gi|238921313|ref|YP_002934828.1| valyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238870882|gb|ACR70593.1| valyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 951

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L +       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYAHWEQQGYFKPNGDTGKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|149280348|ref|ZP_01886469.1| valine--tRNA ligase (valyl-tRNA synthetase) [Pedobacter sp. BAL39]
 gi|149228897|gb|EDM34295.1| valine--tRNA ligase (valyl-tRNA synthetase) [Pedobacter sp. BAL39]
          Length = 889

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 58/214 (27%), Gaps = 34/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+       S  +S  ++  +   +     I     N TG +H+GH     + D L   
Sbjct: 8   DPAATEDKWYSYWMSK-KFFHSEPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G            G    ++A              D    +      +LK+   E 
Sbjct: 67  ARMQGKNACWVP-----GTDHASIATEAKVVAMLKERGID---KKDLSREEFLKY-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          II + LK L    D   +           +
Sbjct: 118 KEKYG------------------------GIILEQLKKLGASCDWDRTRFTMEDDLSDAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            D   +L ++G +Y G+         +    D +
Sbjct: 154 IDSFIHLYKKGRIYRGVRMVNWDPAGKTAVSDEE 187


>gi|150402643|ref|YP_001329937.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150033673|gb|ABR65786.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 1034

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 27/187 (14%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G+D  + +     A++A V +  +    ++        D    KMSK  G+ ++   V +
Sbjct: 558 GNDQVTKWFYSQHALSAVVFDDTSYEKCMMHGF---TLDETGEKMSKSLGNIVSPDDVTE 614

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G+D +RF +L    + E L F + ++ E        +  YA++    +          
Sbjct: 615 QYGADVLRFYLLSANKAWEDLRFSYSEMDETRSMLNTLWNSYAFSANYMVL--------- 665

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLAFY---LYDLA- 529
              D F  N    +   D         L+    V + A  A E P+ L  Y   L D   
Sbjct: 666 ---DDFIPNDEYFKHVKDEDAW----ILSRINTVAKEAVEALEKPH-LHTYTWTLRDFVL 717

Query: 530 SVFHGHW 536
           + F   +
Sbjct: 718 NDFSRWY 724


>gi|159044354|ref|YP_001533148.1| glutamyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|187470989|sp|A8LMK2|SYE1_DINSH RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|157912114|gb|ABV93547.1| glutamyl-tRNA synthase [Dinoroseobacter shibae DFL 12]
          Length = 471

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 13/125 (10%)

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   +  P+  TT   D  +  +  R+  +    D  LL+SDGS  Y    LA     ++
Sbjct: 144 YVIRIKAPQEGTTVIADQVQGDVRIRNDQLD---DMILLRSDGSPVYM---LAVVVDDHD 197

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G  ++I   G DH     R   +  A+        + +   + L       K+SKR G 
Sbjct: 198 MGVTHVIR--GDDHLNNAARQMMIYDAMGWD-----MPVFAHIPLIHGPDGKKLSKRHGA 250

Query: 407 FITLR 411
                
Sbjct: 251 LGVEE 255


>gi|53747884|emb|CAF05629.1| hypothetical protein [Angiococcus disciformis]
          Length = 1103

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 47/160 (29%), Gaps = 32/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH   A + D LA     SG+        + AG     +            
Sbjct: 24  PNVTGSLHIGHALTATIQDILARWKRMSGFNTLWLPGTDHAGIATQMV------------ 71

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V KEL         +     +L  V ++  +   + I +  
Sbjct: 72  -------------------VEKELKKTEGKSRHDLGRAAFLERVWEWKGKYGAR-IGEQH 111

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           + L    D             + +R++   L  +G +Y  
Sbjct: 112 RFLGASLDWSRERFTMDEQSSAAVREVFVRLYEEGLMYRA 151


>gi|46579607|ref|YP_010415.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|60390718|sp|Q72CT7|SYL_DESVH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46449022|gb|AAS95674.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233411|gb|ADP86265.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 829

 Score = 44.1 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       SGI        K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 11  RWQKKWEDSGIFQCDTEADKPKYYVLEMF-PYPSGNIHMGHVRNYSIGDVVARFKRMQGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|332982275|ref|YP_004463716.1| leucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699953|gb|AEE96894.1| leucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 824

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +          K     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 11  RWQDEWEKTKAFKATEDNQKPKYYMLEMF-PYPSGKLHMGHVRNYSIGDVIARYKRMQGY 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71



 Score = 37.2 bits (85), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 15/144 (10%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           YV G +H+     Y +    V   +      +  V L     + +DG   KMSK  G+ +
Sbjct: 532 YVGGVEHAILHLLYSRFFTKVLHDLGLVDVNEPFVNLLTQGMVLKDG--SKMSKSKGNIV 589

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           +   +VD+ G+D+ R  +L+    E  D ++    +QS E    ++     R   +  Q 
Sbjct: 590 SPEDIVDKYGADTARLFILFAAPPER-DLEW---SDQSVEGCFRFL----NRVWRLVDQY 641

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD 492
            D   +   +  P   +  + + +
Sbjct: 642 ADAVKEWVENGKPETDLISDGDKE 665


>gi|330684367|gb|EGG96097.1| hypothetical protein SEVCU121_1129 [Staphylococcus epidermidis
           VCU121]
          Length = 149

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 12/146 (8%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYDEWVKNGYFKPSEDSNKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+    Y        ++   ++   + +  L  N+  +               +  ++Y+
Sbjct: 73  YD--TLYLPG-----MDHAGIATQAKVEAKL--NEQGISRHDIGREKFLEQAWDWKEEYA 123

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKI 244
           S +     +  L +  DYS + ++ +
Sbjct: 124 SFIRKQWAKLGLGL--DYSRERLLWM 147


>gi|291276593|ref|YP_003516365.1| glutamyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963787|emb|CBG39623.1| glutamyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 469

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 109/349 (31%), Gaps = 80/349 (22%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+                    YI           ++   + +  
Sbjct: 32  APSPTGDMHIGNLRAAIF------------------NYI-----------IAKQRKEKFL 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   D+D                   DK    LLN     W  +V      +  +     
Sbjct: 63  IRIEDTDFARN-----------IADKDKEILSLLNLFGLLWDDLVYQSQNFSKHQHFAQI 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L    +    + +++   +       + I    R    +  +     +K   +     + 
Sbjct: 112 LLEKGLAFCCYCTKEFLEQKRLEAKEEKIPF--RYEDAWAELQKDQNTKPVIRLRGSARA 169

Query: 309 LLFRSTMVGD------DVDR-PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
           L+FR  + G+      ++D   +L+ DG  TY   + A      +  +D    V G DH 
Sbjct: 170 LVFRDRIKGEICFEPSELDSFVILREDGIPTY---NFACAID--DMLYDISFIVRGEDHV 224

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD--------------- 406
               +   +   +   K +I      ++ L +DG   KMSKR                  
Sbjct: 225 SNTPKQMLIQKDLGYDK-KIEYAHLPII-LGQDGK--KMSKRDASSSVGYLLSEGFLPQA 280

Query: 407 -----FITLRHVVDEVG--SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                     H   EV    ++V F  +       + FD  +++  ++E
Sbjct: 281 IINYLISMGNHTPKEVFTLQEAVEFFDINLIAKSPVKFDLPRLRFLNRE 329


>gi|298490116|ref|YP_003720293.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232034|gb|ADI63170.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 486

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 59/351 (16%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           +E G+  +        ++         H+GH R  ++ D +   +   GY+V        
Sbjct: 19  VEPGKVKMYCCGVTVYDYC--------HLGHARACIIWDVVRRYLQLIGYDV-------- 62

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY-LKHVGKELADKYSSELLNFPEEK 228
                         RY Q   + D  +          ++ V +     Y  ++     ++
Sbjct: 63  --------------RYIQNFTDIDDKILNRARQEKSTMEAVAERYIQAYFEDMSRLGIKE 108

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQG 284
                +       ++ +  DL+     +    D++ +   F        R  +++L    
Sbjct: 109 ANEYPRATHTMNGIQRLIHDLEHKGFAYPANGDVYYAVQKFDEYGKLSGRK-LEDLQLGA 167

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKC 343
                I      K     D     L  ++   G+   + P  K  G   +     A  + 
Sbjct: 168 SERVNIEDAEYQKKQYPFDF---ALW-KAVKQGEPAWESPWGK--GRPGWHIECSAMVRE 221

Query: 344 KYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           +     D  I+  G+D     H   + + EAV       K   N  L   +         
Sbjct: 222 RLGDTID--IHTGGADLIFPHHENEIAQSEAV-----TGKPLANYWLHNGMVKVDG---E 271

Query: 399 KMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           KMSK  G+F T+R+++D  V   ++R  +L  +  + +DF    +   +  
Sbjct: 272 KMSKSLGNFTTIRNLLDRGVDPMALRLFVLMAQYRKPIDFTDEAILAATNG 322


>gi|166030960|ref|ZP_02233789.1| hypothetical protein DORFOR_00641 [Dorea formicigenerans ATCC
           27755]
 gi|166029227|gb|EDR47984.1| hypothetical protein DORFOR_00641 [Dorea formicigenerans ATCC
           27755]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 79/411 (19%), Positives = 143/411 (34%), Gaps = 78/411 (18%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+  A   ++ +  
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEDGDFMLRI-----EDTDQERYVEGA---VDIIYR 60

Query: 180 SVFWRYQQALYNNDSDLPEGYYP-------GVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           ++           D D+  G Y        G+YL    K+L DK  +    F +++ L  
Sbjct: 61  TMQETGLIHDEGPDKDMGHGPYVQSERNASGLYL-EYAKQLIDK-GAAYYCFCDKERLDS 118

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           +K    +   +I+  D   L +  +    E +   G P  IR                  
Sbjct: 119 LKSKVSEEGTEIVAYDKHCLGLSKEE--VEANLAAGKPYVIR----------------FN 160

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P   TT   D     +   +  +    D  L+KSDG  TY  A++       +     +
Sbjct: 161 MPTEGTTTFHDEIYGDITVENKEL---EDLILIKSDGYPTYNFANV------VDDHLMEI 211

Query: 353 IYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +V+ G+++     +   +  A   K     V +     L  D    K+SKR+G   +  
Sbjct: 212 THVVRGNEYLSSSPKYNKIYEAFGWK-----VPIYVHCPLITDENHKKLSKRSGHS-SYE 265

Query: 412 HVVDE--VGSDSVRFMMLWRK----NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            ++++  V    + ++ L       N E+   +   VKE    N       A    + + 
Sbjct: 266 DLIEQGFVTEAVINYVALLGWCPEGNQEIFSLE-ELVKEFDYHNMSKSP--AVFDIQKLK 322

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
               +    +DFD F         E  T +  L   +A         +P +
Sbjct: 323 WMNGEYLKAMDFDKFFERAEKYIKEVVTKDYDL-KKIAALVKTRIEIFPDI 372


>gi|156603749|ref|XP_001618894.1| hypothetical protein NEMVEDRAFT_v1g152996 [Nematostella vectensis]
 gi|156200817|gb|EDO26794.1| predicted protein [Nematostella vectensis]
          Length = 673

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 53/216 (24%), Gaps = 35/216 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +   +   K       SG             V I     N TG +H+GH     V D L 
Sbjct: 7   FQHNAAEEKWYKHWNDSGYFTSVPDERPSYTVVI--PPPNVTGVLHMGHALNDTVQDILV 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +    L     D  +             
Sbjct: 65  RRAKMQGYNTC-------WVPGTDHASIATEAKVVNMLKERGID--KNALSREEFLEYAW 115

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  +KY                          II   LK L    D   +         +
Sbjct: 116 EWKEKYG------------------------GIILQQLKKLGCALDWNRTHFTMDDEYYA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +  +L  +G +Y G+         +    D +
Sbjct: 152 AVIRVFVDLYNKGQIYRGVKMINWDPKAKTALSDEE 187


>gi|148977747|ref|ZP_01814303.1| valyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962961|gb|EDK28231.1| valyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 957

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGRLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|239905094|ref|YP_002951833.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794958|dbj|BAH73947.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 837

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 76/259 (29%), Gaps = 53/259 (20%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +    I   G  +         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 6   PEDVERKWQRIWEEGGHFHVEADPSKPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARFK 65

Query: 155 AFSGYEV--------------------------TREYYINDAGAQINTLALSVFWRYQQA 188
              G+ V                               I+    Q+  L  S  WR + A
Sbjct: 66  RMEGHNVLHPMGWDAFGMPAENAAIKHKLHPAAWTISNIDSMRTQLQRLGYSYDWRREIA 125

Query: 189 LYNNDS---------DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
             +               E     VY KH  +   +   + L N        ++     +
Sbjct: 126 TCHPGYYVHEQRFFLKFLEKGL--VYRKHSPQNWCETCGTVLANE------QVIDGCCWR 177

Query: 240 AMMKIIRDDLKALNIQHDIFISE-----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
               +++ DL+   ++   +  E     D    G P  +  +     ++ ++ + +    
Sbjct: 178 CDQAVVQKDLEQWFLRITDYAEELLADLDQLVGGWPERVLTM-----QRNWIGKSVGAEI 232

Query: 295 KSKTTQKCDMDRKQLLFRS 313
             K  +         +F +
Sbjct: 233 TFKLAEPVAGSEGVTVFTT 251


>gi|254418324|ref|ZP_05032048.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184501|gb|EDX79477.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 849

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P        +       +     G+     +E     P+G +H+GH R  V+GD +A   
Sbjct: 6   PKTAEPRQQARWAEASAFVTKDTGRPKYYVLEMF-PYPSGNIHMGHARNYVMGDVVARSK 64

Query: 155 AFSGYEV 161
              GY+V
Sbjct: 65  RAQGYDV 71


>gi|152998225|ref|YP_001343060.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082326|sp|A6W346|SYI_MARMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150839149|gb|ABR73125.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 940

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 87/262 (33%), Gaps = 37/262 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            + H   P  I ++   +  +G          +++     D ++   +  +  V  D   
Sbjct: 486 QELHPETPRLIEEVAKRIEVEGI---DAWFEMEAEELLGADAEKYSKVTDTLDVWFDS-- 540

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQI 381
                 G   Y   D      + E  F   +Y+ GSD   G+ +     + A+       
Sbjct: 541 ------GVTHYSVID-----QRDELSFPADLYLEGSDQHRGWFQSSLKTSIAIRGVPPYK 589

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            VL         DG   KMSK  G+ ++ + V+D +G+D +R  +     +  +     +
Sbjct: 590 QVLTHGF---TVDGDGRKMSKSLGNVLSPQKVMDTLGADIIRLWVAATDYTTEMTVS-DE 645

Query: 442 VKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           + ++  +        +Y R R+  R   A     +   D+ P   +     +      L+
Sbjct: 646 ILKRVAD--------SYRRIRNTARFMMANLNGFNPATDMVPAKDMIALDRWIVDRAALL 697

Query: 500 VHLAEYPRVIENATIAQEPYKL 521
                    +  A    + + +
Sbjct: 698 QK------ELNTAYNEYQFHTV 713


>gi|59711018|ref|YP_203794.1| valyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81311020|sp|Q5E7U0|SYV_VIBF1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|59479119|gb|AAW84906.1| valyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 957

 Score = 44.1 bits (103), Expect = 0.069,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQTLYQTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 152 ATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|306829685|ref|ZP_07462875.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428771|gb|EFM31861.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 679

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 29  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 77  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 129

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 130 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 183

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 184 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 243

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 244 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 303

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 304 DVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 352


>gi|317131247|ref|YP_004090561.1| glutamyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469226|gb|ADU25830.1| glutamyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 486

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 106/309 (34%), Gaps = 40/309 (12%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQ 173
           G        + +PTG MHVG+ R A+    +A       ++     +  +E Y+     +
Sbjct: 2   GQTEVRTRFAPSPTGYMHVGNLRTALYTYLIAKSQGGKFILRIE--DTDQERYV-----E 54

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                +    R    L++   D+  G   G Y++   +++  +Y+ EL+           
Sbjct: 55  GAVEIIYKTLRETGLLWDEGPDV--GGPVGPYVQSERRDIYARYAKELIEKGGA------ 106

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                       ++ L  L   H+       +         + +  L  +G  +      
Sbjct: 107 ------YYCFCGKERLDELRKIHEASGVPHKYDGHCRDLAPEEVQRLLAEGVPHVVRQKI 160

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P   +T   D+    +   +  + D+    LLK+DG  TY   + A     +  G  ++ 
Sbjct: 161 PTEGSTTFHDVIFGDITVENDTLDDN---VLLKTDGLPTY---NFANVIDDHLMGITHV- 213

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G ++     +   +  A          + C  V   RD    K+SKR GD      V
Sbjct: 214 -VRGIEYLSSAPKYNLLYEAFGWDIP--TYIHCPPV--MRDATH-KLSKRHGDPSYEDLV 267

Query: 414 VDEVGSDSV 422
            D    ++V
Sbjct: 268 ADGYLKEAV 276


>gi|260548968|ref|ZP_05823190.1| valyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260408136|gb|EEX01607.1| valyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 959

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGVTRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|193213365|ref|YP_001999318.1| isoleucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086842|gb|ACF12118.1| isoleucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 1080

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 15/139 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + ++ A  N+++   +    D    KMSK  G+ +     ++
Sbjct: 584 GVDQTRGWFYTLHAIATLIFDRPAYRNLVVNGHI---LDKKGQKMSKSKGNVVDPFESME 640

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G+D++R ++M+         F+  +++E+ ++       +  F+V YA       FR 
Sbjct: 641 QYGADAIRWYLMITSPPWRPKLFNVAEIEEEQRKFFRAFINSYNFFVLYANV---DGFRN 697

Query: 468 AKDIFPDLDFDLFPRNVIP 486
            +   P  +     R V+ 
Sbjct: 698 EEATIPFAERSELDRWVLS 716


>gi|161830331|ref|YP_001596339.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082322|sp|A9NBM5|SYI_COXBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161762198|gb|ABX77840.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 936

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 68/213 (31%), Gaps = 26/213 (12%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    +  WLP   +  +  +        I R  L  + I   I     + H   P+
Sbjct: 433 ERALAEIEKVTWLPAWGEARIGKLVADRPDWCISRQRLWGIPIPLFIHKKSGELHPKSPA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +   +  L  +  V       PK       D   K                    D   
Sbjct: 493 LMEK-VAQLIEKESVDAWFDLDPKVLLGDDADHYEKVTDVLDVWF-----------DSGV 540

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F       + + E      IY+ GSD   G+ +     + A+ +K    +VL    V 
Sbjct: 541 THFCV----LEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVV 596

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              D    KMSK  G+ I    VV  +G+D +R
Sbjct: 597 ---DSQGRKMSKSLGNVILPADVVKNLGADVLR 626


>gi|312144268|ref|YP_003995714.1| glutamyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904919|gb|ADQ15360.1| glutamyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 488

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 108/296 (36%), Gaps = 45/296 (15%)

Query: 130 ANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            +PTG +H+G+ R A+          G+ +  +        ++E+           +   
Sbjct: 10  PSPTGKIHIGNMRTALFNWLVAEQKGGELVLRIEDTDQARSSKEF--------EEIIIRE 61

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           + W   +A    D  +  G   G Y +    ++  K+  ELL           K Y  QA
Sbjct: 62  MEWLGLEA----DEGVGIGGEYGPYRQTERLDIYQKHGDELLESG-----HAYKCYCTQA 112

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            ++ +R+      +++D     D   R      ++  +   R   +   +  P + +   
Sbjct: 113 ELEEMRNK----AVENDKMPRYDGSCRNLSQAEKEAYEAEGRDYVLRFKM--PKEERLIV 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ R ++ F S+++ D +   + KSDG  TY   + A           ++I   G DH
Sbjct: 167 VDDIIRGKVEFNSSVLDDFI---IFKSDGMATY---NFAVVIDDALMKISHVIR--GEDH 218

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                +   +  A++ +  +        + L  D    K+ KR  D + +    ++
Sbjct: 219 LSNTPKQIMIYKALNFELPKFAH-----LPLILDENKAKLKKRGKDSVYVGEFREQ 269


>gi|195441879|ref|XP_002068689.1| GK17911 [Drosophila willistoni]
 gi|194164774|gb|EDW79675.1| GK17911 [Drosophila willistoni]
          Length = 1047

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 60/219 (27%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S          EYGR          K  +     N TG +H+GH     +
Sbjct: 93  SPKYVEAQWYSWWEKEGFFKPEYGRESIDAPNPNGKFIMIIPPPNVTGSLHLGHALTNAI 152

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 153 EDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKL------------------ 194

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + D+  +   + I D LK+L   +D         
Sbjct: 195 -------------SRHDLGREKFIERIWDWRREKGGR-IYDQLKSLGSSYDWSRVAFTMD 240

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L   G +Y        S T +    D
Sbjct: 241 PKLCRTVTEAFVRLHEDGAIYRSSRLVNWSCTLRSAISD 279


>gi|225549897|ref|ZP_03770858.1| valyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369356|gb|EEG98808.1| valyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|54293912|ref|YP_126327.1| isoleucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822422|sp|Q5WXX1|SYI_LEGPL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53753744|emb|CAH15202.1| Isoleucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 931

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 71/242 (29%), Gaps = 35/242 (14%)

Query: 293 PPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------GSYTYFAADLAYF 341
               K     +       F    S ++GDD       +D        G   Y        
Sbjct: 490 ELIEKVAVMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSV-----L 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K   +  F   +Y  GSD   G+       A A+        VL         D    K+
Sbjct: 545 KHNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGY---TVDAEGKKL 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+++ L  +V++ G+D +R  +        +      +K  +          AY R
Sbjct: 602 SKSKGNYVALDKLVNQHGADILRLWVASTDYRHEVSISEEIIKRNAD---------AYRR 652

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQEPY 519
            R+  R       D +      + I  +   +     L    L +    I  A      +
Sbjct: 653 IRNTARFLLANLFDFN---PASDCIDAKELLELDRWALKRCQLLQ--EEIITAYDNYHFH 707

Query: 520 KL 521
            +
Sbjct: 708 LI 709


>gi|23098939|ref|NP_692405.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746457|sp|Q8ER41|SYI1_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|22777167|dbj|BAC13440.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 918

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 127/391 (32%), Gaps = 79/391 (20%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D     L    +  W P   +  +  M++  R+D      +A  +   +F  ED    
Sbjct: 415 IKDFRVDILEEIKQVNWYPHWGETRLYNMVRD-REDWCISRQRAWGVPIPVFYGEDGTPI 473

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                I  + +     G            + EG             + D   + F S   
Sbjct: 474 ITDETINHVSELFREHGSNIWFEKEAKELLPEGFTSEHSPNGNFAKETDIMDVWFDS--- 530

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G   +  LL                +  ++R  +  +Y+ GSD   G+     + + AV+
Sbjct: 531 GSSHEGVLLN---------------RQNHQRPAN--VYLEGSDQYRGWFNSSLSTSVAVT 573

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     V+    V    DG   KMSK  G+ I    V  ++GSD +R  +        +
Sbjct: 574 GKAPYKAVISHGFV---LDGNGRKMSKSLGNVIVPSKVQKQLGSDILRLWVSSVDYQADV 630

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +K+ S+         +Y + R+ FR       D +    P     +E   +  +
Sbjct: 631 RISDDILKQTSE---------SYRKIRNTFRFLLANLADFN----PNTDRVKEENMEEVD 677

Query: 496 LQLIVHLAEYPRVIENATIAQ-----EP-----YKLA------FYLYDLASVFHGHWSHG 539
             ++  L     V+  A          P     +         FYL D A      +   
Sbjct: 678 RYMVHRLQN---VLAEAHKNYNQYEFAPVFQQIHHFCSVDLSSFYL-DFAKDI--LYIEA 731

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           +++PR R +Q    ++      LV  +A II
Sbjct: 732 KDHPRRRSIQTGYYEVLTS---LVKLIAPII 759


>gi|304320514|ref|YP_003854157.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299416|gb|ADM09015.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 864

 Score = 44.1 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   S +        +     +E     P+G +H+GH R   +GD LA      G
Sbjct: 11  AKWQAAWAKSNVFAASLSGDRPKSYILEMF-PYPSGKIHIGHVRNYAMGDVLARYKRAKG 69

Query: 159 YEV 161
           Y+V
Sbjct: 70  YDV 72


>gi|323350587|ref|ZP_08086249.1| glutamate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123269|gb|EFX94954.1| glutamate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324992544|gb|EGC24465.1| glutamate--tRNA ligase [Streptococcus sanguinis SK405]
 gi|327459956|gb|EGF06295.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327472490|gb|EGF17921.1| glutamate--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327488851|gb|EGF20650.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 485

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREAAGIIPTVRLVVNEAGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|302336403|ref|YP_003801610.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320243|gb|ADK68730.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 493

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 111/356 (31%), Gaps = 59/356 (16%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  D +   + + GY+VT                      + Q
Sbjct: 27  CGPTVYDQIHIGNARTFLSFDVIRRYLTYKGYQVT----------------------FAQ 64

Query: 188 ALYNNDSDLPEGY-YPGVYLKHVGKELADKYSSELLNF---PEEKWLPIVKDYSVQAMMK 243
            L + D  +       G     V +E +  +  ++  F     +      ++  V+AM +
Sbjct: 65  NLTDVDDKIINRANDEGRSATEVAEEFSCAFIDQMRRFNILDPDIRPRATRE--VEAMRQ 122

Query: 244 IIRDDLKALNIQH-----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +I + L      +     D++ S    H       RD +D L                  
Sbjct: 123 MI-ETLIEKGHAYVAGNGDVYFSVRSDHDYGSLSGRD-LDQLRA---------GERVEVN 171

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             K D     L   +         P    +G   +     A             I + G 
Sbjct: 172 EDKRDPFDFALWKAAKPGEPSWPSPW--GEGRPGWHTECCAMIHHYLGTP----IDIHGG 225

Query: 359 DHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                    E   A A+    A +  +      L  +G   KMSK  G+F+TL  V+D+ 
Sbjct: 226 GQDLVFPHHENECAQALCAWGAPLANIWMHAGMLRVNG--DKMSKSLGNFLTLEDVLDDY 283

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            + +VR +ML       LDF   ++  +     +  ++     C    R A +  P
Sbjct: 284 PAGAVRLLMLQTHYRSALDFQTDQL--EGAVGTLERLR----TCVKNLRWAAENAP 333


>gi|291542012|emb|CBL15122.1| glutamyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 484

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 104/289 (35%), Gaps = 32/289 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+                  EY +  A +Q     L +    ++ 
Sbjct: 11  APSPTGFMHVGNLRTALY-----------------EYLV--AKSQNGKFILRIEDTDRER 51

Query: 189 LYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           L     D+         LKH  G ++   +   + +  ++ +LP  +    +        
Sbjct: 52  LVEGAVDVIYDTMKLAGLKHDEGPDIGGDFGPYVQSERKDMYLPYAEQLIKEGKAYRCFC 111

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + L    D       + R   +  ++ ID L  +G  Y      P   +T   D    
Sbjct: 112 TKERLEKLQDSVGGG--YDRHCRNLPQEEIDRLLAEGTPYVIRQKMPIEGSTTFTDAVFG 169

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D+ L+K+DG  TY   + A     +  G  ++  V G ++     + 
Sbjct: 170 EITVDNSEL---QDQILIKTDGYPTY---NFANVIDDHTMGITHV--VRGCEYLSSTPKY 221

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
             +  A   +      L   + +   DG   K+SKR G       +++E
Sbjct: 222 NLLYEAFGWEIPTYIHLPLIMGKDA-DGNVSKLSKRHG-ATGFYDLINE 268


>gi|240141531|ref|YP_002966011.1| glutamate tRNA synthetase, catalytic subunit [Methylobacterium
           extorquens AM1]
 gi|240011508|gb|ACS42734.1| glutamate tRNA synthetase, catalytic subunit [Methylobacterium
           extorquens AM1]
          Length = 474

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 88/293 (30%), Gaps = 48/293 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND----AGAQINTLA 178
             +   + +PTG +H+G  R A+     A    F G  + R   I D       Q    A
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR--RFGGRMLLR---IEDTDRERSTQGAIDA 58

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +    R+    ++           G  +    +  A+++     +            Y+ 
Sbjct: 59  ILDGMRWLGLDWD-----------GEVIYQFAR--AERHREVAESLLASGNAYHC--YAS 103

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              +  +R+  +A            D    +       +  L            P + +T
Sbjct: 104 AEELTQMRETARAEGRAPRYDGRWRDRDPSEAPAGVKPVIRLRA----------PSEGET 153

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             +  +  +          D  D  LL+SDG+ TY    LA     ++ G   +I   G 
Sbjct: 154 VVEDAVQGRVTW----ANRDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQVIR--GD 204

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           DH     R   +  A+      +       + L       K+SKR G      
Sbjct: 205 DHLTNAARQSQIYRALGWDVPAMAH-----IPLIHGADGAKLSKRHGALGVEE 252


>gi|291296614|ref|YP_003508012.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471573|gb|ADD28992.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 868

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 56/208 (26%), Gaps = 33/208 (15%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       + ++   N         I     N TG +H+GH     + DT+       GY
Sbjct: 19  RWALEWAQNPLKPELNAHKGKGPFTIVIPPPNVTGNLHLGHALDNTIIDTIIRFKRMQGY 78

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                      +ALY   +D        +  + + +E   ++  
Sbjct: 79  ---------------------------EALYLPGTDHAGITTQVLVERELAQEGLSRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E  W    K+ +  A++      L+ +    D          G    +R     
Sbjct: 112 GREKFLERVW--AFKEKNGGAILHQ----LRRIGASCDWSRERFTMDEGLSRAVRRAFIE 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
              QG  Y G          Q    D +
Sbjct: 166 YYHQGLAYRGKRIVNWDPVAQTVVSDLE 193



 Score = 37.2 bits (85), Expect = 8.9,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 76/222 (34%), Gaps = 29/222 (13%)

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
           V +K V +++ +      + F  E+W  + +D+        I   L   +     +  E 
Sbjct: 367 VRMKPVAEKVLEGLDKGEMRFVPERWEKVNRDWLENIKDWAIARQLWWGHQIPAWYDEEG 426

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           + +  DP       D   R  ++                      L   ST+   D    
Sbjct: 427 NIYVPDPDNPDLDCDQDPRYAHLKLRRDEDVFDTWF------SSALWPFSTLGWPDATPD 480

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L K      Y+  D+         G+D +I+         V R++      + +     +
Sbjct: 481 LKK------YYPTDV------LVTGYD-IIFFW-------VARMQMSGYQFTGRAPFHTI 520

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           +L     LY D    KMSK  G+ I    ++D+ G+D+ RF 
Sbjct: 521 VLHG---LYLDAKGQKMSKSKGNGIDPLELIDKYGADACRFA 559


>gi|226320397|ref|ZP_03795965.1| valyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226234206|gb|EEH32919.1| valyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|224533275|ref|ZP_03673869.1| valyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225548893|ref|ZP_03769870.1| valyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224513440|gb|EEF83797.1| valyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225370496|gb|EEG99932.1| valyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|221217937|ref|ZP_03589404.1| valyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192243|gb|EEE18463.1| valyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|90961419|ref|YP_535335.1| leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993086|sp|Q1WUT3|SYL_LACS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90820613|gb|ABD99252.1| Leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 805

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 34/287 (11%)

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
             +Y +N  G     +  +   R  +     D  + +    G   K          +S+ 
Sbjct: 323 IADYVLNSYGTGAVMVVPAHDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDF 382

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           LN  +       K+ ++ A+   + ++    K +N +   ++     + G+P P+    D
Sbjct: 383 LNGMD-------KEEAIDAINNWLEENGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWED 435

Query: 279 NLARQGYVYEGILPPPKSKTTQK----------CDMDRKQLLFRST-MVGDDVDRPLLKS 327
                  V E  LP    K T             ++D    +       G      + + 
Sbjct: 436 G--ETTLVPEDELPLYLPKATDIKPSGTGESPLANLDDWVNVVDENGRKGRRETNTMPQW 493

Query: 328 DGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSE 376
            GS  YF   +          ++ +       +YV G++H+     Y +        +  
Sbjct: 494 AGSSWYFLRYIDPHNNHEIADYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGV 553

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +          +       KMSK  G+ +    +V++ G+D++R
Sbjct: 554 VPTKEPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVEQYGADTLR 600


>gi|85000239|ref|XP_954838.1| methionyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302984|emb|CAI75362.1| methionyl-tRNA synthetase, putative [Theileria annulata]
          Length = 884

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 106/319 (33%), Gaps = 31/319 (9%)

Query: 171 GAQINTLALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           G   + ++ S +     RY+  L +  +   +  YP      +   L D+     ++   
Sbjct: 439 GKPYDLMSESSYFFKMERYRTQLVDYINTNQDFIYPKKVKNEILTRLKDQLDDLSISRTS 498

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLA---- 281
             W   V       + + + +D+       +   +E  F+   +   +   +  L     
Sbjct: 499 FDWGIEVPSTDDIIITEYVNNDVNVGYNHENKLFNESKFYNEVNKGEVAKKVKALHSDDQ 558

Query: 282 -RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA---- 336
              G      L   + +T+ +  +D   +   +    ++     +  D    Y  +    
Sbjct: 559 PESGETKVS-LTSNQDQTSSEKKVDSTHVSPNTKKQENEKHVMYVWFDALSFYMTSSGLG 617

Query: 337 ----DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
               ++ Y+    +        V+G D   + + +       S        +L       
Sbjct: 618 ESLSEMMYWPTDLQ--------VIGKD-ISWFQSVILATMCFSMGLPLTRKILAHGFIQG 668

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPV 451
            DG   KMSK  G+ + L  ++ EVG +S R+ +L        ++FD  ++KE    +  
Sbjct: 669 SDGR--KMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVMGSDVNFDQNQLKEMHNSDLA 726

Query: 452 FYVQYAYARCRSIFRQAKD 470
             V     R  S+  +  +
Sbjct: 727 DNVGNLVHRLTSLVTKYNE 745


>gi|148266323|ref|YP_001233029.1| isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146399823|gb|ABQ28456.1| Isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 924

 Score = 44.1 bits (103), Expect = 0.071,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 21/171 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       +          +VL    V    DG   KMSK  G+ +    
Sbjct: 558 YLEGSDQHRGWFHSSLLASVGTRGVAPYKSVLTHGFVV---DGSGRKMSKSVGNVVAPED 614

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G++ +R  +  +   + L      +   S+         AY R R+  R      
Sbjct: 615 VIKKYGAEVLRLWVAAQDYRDDLRISQEILTRLSE---------AYRRIRNTCRYILGNI 665

Query: 473 PDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            D D   D  P   +P+   +   +L+L+         +  A  A E + L
Sbjct: 666 GDFDPKADSVPYGDMPEIDRWALHQLELLK------EKVLKAYDACEFHVL 710


>gi|167835732|ref|ZP_02462615.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 98/306 (32%), Gaps = 35/306 (11%)

Query: 281 ARQGYVYEGILP--PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L      ++  +K  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEAVAQRVEKQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+ +       Q  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDY-VKDALPAGQWLEIDRYAVAFAAQLQ--TELL 720

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA- 567
            +     E + +   L    S    G +    ++       A+N      +  L H    
Sbjct: 721 AH-YEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASN-ARRSAQTALYHVTQG 778

Query: 568 --SIIN 571
              ++ 
Sbjct: 779 LLRVLA 784


>gi|241204404|ref|YP_002975500.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858294|gb|ACS55961.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 947

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D L       G +V  +  
Sbjct: 22  ADAFRAGANARPGAETFAIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +               +  L E   PG                   +   
Sbjct: 82  MDHAGIATQMVV--------------ERKLMEQQLPG-----------------RRDMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E ++  + ++  ++   +I + LK L    D          G    + ++   L ++G +
Sbjct: 111 EAFIDKIWEWKAESG-GLIFNQLKRLGASCDWSRERFTMDEGLSKAVIEVFVTLYKEGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 85/257 (33%), Gaps = 47/257 (18%)

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     P++  +++L        G +                 L   ST+   D    L 
Sbjct: 479 YLSHEGPMKAYVEDLLEN--FKPGEILTRDEDVLDTWFSS--ALWPFSTLGWPDETPELA 534

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +      Y+  ++         GFD +I+         V R+  +   + + +    V  
Sbjct: 535 R------YYPTNV------LVTGFD-IIFFW-------VARMMMMGLHLMKDEDGEPVEP 574

Query: 386 CELVR---LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            E V    L RD    KMSK  G+ I    ++DE G+D++R             F    +
Sbjct: 575 FETVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIM 621

Query: 443 KEQSKE---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
             Q ++   +P     Y   R           F +++      + +P+ +E   +   ++
Sbjct: 622 AAQGRDVKLDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-IL 677

Query: 500 VHLAEYPRVIENATIAQ 516
             LA   R +  A  A 
Sbjct: 678 TELARTERDVTEALEAF 694


>gi|67461906|sp|Q5PAG8|SYE2_ANAMM RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
          Length = 466

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 87/300 (29%), Gaps = 56/300 (18%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I   + +PTG +H+G  R A+     A                   G Q        
Sbjct: 1   MRVITRFAPSPTGSLHLGGARTALFNWLFARR----------------HGGQF------- 37

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R +       S+          ++ +           ++     +    V        
Sbjct: 38  LLRMEDTDQERSSETVAQSI----IEDMAWLGLHHDQDVVIQSARRERHTQVA------- 86

Query: 242 MKIIRDDLKALNIQHDIFISEDDF------HRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                ++L A    +  + SEDD       H  +    R    +     +   G     +
Sbjct: 87  -----EELLARGKAYYCYCSEDDIAAEKLRHENEGKHYRHHCPS-RDANHAQSGTAGVLR 140

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            K+ +  ++     ++    V  +   D  +L+S+G  TY    LA     ++    ++I
Sbjct: 141 LKSPENREIKFTDGVYGEISVSSEQIDDMVILRSNGHPTYL---LAVVVDDHDMCITHII 197

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              GSDH     +   +A A+     Q   +    +     G  +    RA      R +
Sbjct: 198 R--GSDHITNTIKQMLLAEAMGWDNPQFCHI---PLIHDEGGAKLSKRNRAPGVHEYREL 252


>gi|322421080|ref|YP_004200303.1| leucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127467|gb|ADW15027.1| leucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 824

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +         +   +         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 7   PSAVEGKWQQFWATHDSFKATEDASRKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFK 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMQGYNV 73


>gi|301299745|ref|ZP_07205994.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852652|gb|EFK80287.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 805

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 34/287 (11%)

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
             +Y +N  G     +  +   R  +     D  + +    G   K          +S+ 
Sbjct: 323 IADYVLNSYGTGAVMVVPAHDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDF 382

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           LN  +       K+ ++ A+   + ++    K +N +   ++     + G+P P+    D
Sbjct: 383 LNGMD-------KEEAIDAINNWLEENGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWED 435

Query: 279 NLARQGYVYEGILPPPKSKTTQK----------CDMDRKQLLFRST-MVGDDVDRPLLKS 327
                  V E  LP    K T             ++D    +       G      + + 
Sbjct: 436 G--ETTLVPEDELPLYLPKATDIKPSGTGESPLANLDDWVNVVDENGRKGRRETNTMPQW 493

Query: 328 DGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSE 376
            GS  YF   +          ++ +       +YV G++H+     Y +        +  
Sbjct: 494 AGSSWYFLRYIDPHNNHEIADYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGV 553

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              +          +       KMSK  G+ +    +V++ G+D++R
Sbjct: 554 VPTKEPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVEQYGADTLR 600


>gi|212636473|ref|YP_002312998.1| isoleucyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|254782434|sp|B8CSC1|SYI_SHEPW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|212557957|gb|ACJ30411.1| Isoleucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 940

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 18/191 (9%)

Query: 348 GFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +  +Y+ GSD   G+      ++ A++ K     VL         DG   KMSK  G+
Sbjct: 556 GHEVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF---TVDGKGRKMSKSVGN 612

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I  +HV +++G+D +R  +     S  +     ++ ++S +        AY R R+  R
Sbjct: 613 VIAPQHVTNKLGADILRLWVAATDYSGEMTVS-DEILKRSAD--------AYRRIRNTAR 663

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
                    + +     V    +        ++   A   + +  A      + +   L 
Sbjct: 664 FLLANINGFNPETDMVAVEDMVALD----RWVVRRAAALQQELLEAYDQYNFHLVTQKLM 719

Query: 527 DLAS-VFHGHW 536
              S      +
Sbjct: 720 QFCSVELGSFY 730


>gi|168705185|ref|ZP_02737462.1| valyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 1044

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 36/218 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVGDT 149
           S +   K L+     G  +      K    N  +       N TG +H+GH     + D 
Sbjct: 11  SKAAQEKWLTFWEGKGFFHSEPDPEKKKYPNGPYTIVIPPPNVTGALHMGHALNNTLQDV 70

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G+        + AG    ++   +    ++   ++             +K +
Sbjct: 71  LIRWKRMQGFNALWMPGTDHAGIATQSVVERLVLAQEKKTRHDLG-------RDELVKRI 123

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E  DKY + +L                          L+ +    D   +        
Sbjct: 124 -WEWKDKYEARILGQ------------------------LREIGASCDWKRTRFTLDPVC 158

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              +R+    + R GY+Y G          Q    D +
Sbjct: 159 ARAVRETFFRMFRDGYIYRGKRLVNWDTHLQTSVADDE 196


>gi|119899197|ref|YP_934410.1| valyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166225519|sp|A1K9L8|SYV_AZOSB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|119671610|emb|CAL95523.1| ValS protein [Azoarcus sp. BH72]
          Length = 998

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 60/238 (25%), Gaps = 49/238 (20%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +        G               I     N TG +H+GH     + D L       G
Sbjct: 14  ARRYPEWESRGYFDAGLDTSNPNAFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRG 73

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                +   + AG   QI                                  V +   D 
Sbjct: 74  DNTLWQPGTDHAGIATQI----------------------------------VVERQLDA 99

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 +   EK+L  V ++   +   I R  ++ L    D          G    + + 
Sbjct: 100 QGVSRHDLGREKFLEKVWEWKEYSGGTITRQ-MRRLGTSPDWKRERFTMDEGLSKTVTET 158

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-----SDG 329
              L  +G +Y G       K     D      +    +V ++ D  L       SDG
Sbjct: 159 FVRLYNEGLIYRG-------KRLVNWDPKLGTAVSDLEVVSEEEDGKLYHILYPFSDG 209


>gi|154249366|ref|YP_001410191.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769335|sp|A7HKV1|SYC_FERNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154153302|gb|ABS60534.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 470

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 105/332 (31%), Gaps = 57/332 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  VV D L   + F GY V       D   +I           + 
Sbjct: 30  CGPTVYNYIHIGNARPMVVFDALRRFLEFVGYRVIMVQNFTDIDDKIIN---------EA 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             +N D       +   Y  H  + L  + ++      +      VKD  V+A+  +I+ 
Sbjct: 81  KEWNVDWKTVADTFIAEY-FHDAQLLGVRAANYHPRTTD-----FVKDI-VEAIETMIKK 133

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           D                 +  +   +   +  L   G          K       D+   
Sbjct: 134 DFA---------------YPAENGDVYFSVRKLRDYG----------KLSGKNLDDLRAG 168

Query: 308 QLLFRSTMVGDDVDRPLLKS--DGSYTYFAA----DLAYFK---CKYERGFDNMIYVMGS 358
             +  + +  D +D  L KS   G  T+ +        +        ++   +M  + G 
Sbjct: 169 ARVDVNELKKDPLDFVLWKSAKPGEPTWDSPWCNGRPGWHIECSVMSQKLLGDMFDIHGG 228

Query: 359 DHSGYVKRLE---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                    E   A + A++ K      +   ++ +  D    KMSK  G+   +R  V 
Sbjct: 229 GEDLIFPHHEDEIAQSEALTGKPPAKYWMHNGMIIVRGD----KMSKSLGNTFMVREAVR 284

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
               D V+  +L +     ++F    +++  +
Sbjct: 285 RYTKDGVKLFLLSKHYRSPMEFSDEILQDNMR 316


>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 483

 Score = 44.1 bits (103), Expect = 0.072,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 111/380 (29%), Gaps = 98/380 (25%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D                           
Sbjct: 43  HLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTD--------------------------- 75

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +     + A +   +     E               +KI  +D++AL ++ 
Sbjct: 76  ---------IDDKIIKRARETGEDPKELAER-------------FIKIFLEDMEALKVKP 113

Query: 257 DIFISEDDFHRGDPSPIRDIID---NLARQGYVYEG----------ILPPPKSKTTQKCD 303
                  D +      I DII+    L  +GY YEG               K    +  D
Sbjct: 114 ------ADIYPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIED 167

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGFD 350
           + +   +       +  D  L K              +G   +               FD
Sbjct: 168 LQKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFD 227

Query: 351 NMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             I+  G+D     H   + + EA           +   L     + +     KMSK  G
Sbjct: 228 --IHGGGNDLIFPHHENEIAQSEAC-----FGHEWVKYWLHTGFVMVKG---EKMSKSLG 277

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +F+T+R ++     + +RF +L +     L++    +  Q  +N +  +       R   
Sbjct: 278 NFVTIRELLKRYEPEVIRFFVLQKHYRSPLEYTEEGL--QHAKNNLQRLYNTLENIRVAL 335

Query: 466 RQAKDIFPDLDFDLFPRNVI 485
           R A+  +   + +     +I
Sbjct: 336 RNAEISYTWGELEFKTYEII 355


>gi|317503327|ref|ZP_07961375.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665550|gb|EFV05169.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 1211

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 124/346 (35%), Gaps = 58/346 (16%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +D            ++ +  E+    ++ ++    
Sbjct: 566 LNDW-----NLSRSRFWGTPLPIWRDD---KRNEKCIGSIEELYAEVEKSVAAGVMKSNP 617

Query: 227 EKWLPIV-KDYSVQAMMKIIRDDLKALNIQHDIFISED-DFHRGDPSPIRDIIDN----L 280
            K    V  DYS +   K+   DL    +   + ++E  +  + +   I    D+     
Sbjct: 618 LKDNGFVPGDYSKENYDKV---DLHRPYVDDIVLVNEAGEPMKRESDLIDVWFDSGSMPY 674

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+Q Y +EG L P   K T K ++  ++ L  ST  G  V            Y+ AD   
Sbjct: 675 AQQHYPFEGELAPEALKATGKSEVGYRRELVTSTYEGIPVP---------PAYYPAD--- 722

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                       I   G D   G+   L A++  V         ++   + L  D    K
Sbjct: 723 -----------FINE-GVDQTRGWFFTLHAISTMV-FDHVAFKNVISTGLVL--DAKGNK 767

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPV 451
           MSK  G+      ++D+ G+D VRF M+      + L FD   V E  ++          
Sbjct: 768 MSKHVGNVTNPFEMIDKYGADPVRFYMMTNSEPWDNLKFDPNGVDETRRKLFGTLYNTYS 827

Query: 452 FYVQYAYARCRSIFRQ--AKDIFPDLD---FDLFPRNVIPQESEFD 492
           F+  YA     +   +  A +  P++D          +   E E +
Sbjct: 828 FFALYANVDGFAPEAKQVALENRPEIDRWIISKANSLIKGVEHELE 873


>gi|312148470|gb|ADQ31129.1| valyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|307706348|ref|ZP_07643160.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618266|gb|EFN97421.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 665

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DIKLPERLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|254507457|ref|ZP_05119592.1| valyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549713|gb|EED26703.1| valyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 957

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQAWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|254780445|ref|YP_003064858.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040122|gb|ACT56918.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 963

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 28/196 (14%)

Query: 353 IYVMGSDHS-GYVKRL--EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+ GSD   G+ +    E+ A   S        L+     +  +G   KMSK  G+ + 
Sbjct: 589 VYLEGSDQHRGWFQHSLLESCATRGSTP---FTSLITHGFSVDENGE--KMSKSKGNVVF 643

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
              ++ E G+D +R+  +    +     D    K   + N        Y + R+  R   
Sbjct: 644 PEEIISESGADVLRYWAV----NSDYHDDQRLGKNIIQTNID-----TYRKLRNTIRWM- 693

Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYD 527
                    +   +   + S  D  +  QL++H L E  +V+  A  A    ++   L +
Sbjct: 694 -------LGMLAHDTGNEPSLADMPALEQLMLHRLTELDQVVREAYDAFNFKEVVRQLTN 746

Query: 528 LASV-FHGHWSHGREN 542
            ++      +   R++
Sbjct: 747 FSNAELSSFYFDIRKD 762


>gi|186475341|ref|YP_001856811.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|254782378|sp|B2JDY9|SYI_BURP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|184191800|gb|ACC69765.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 27/229 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  +   ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEVSGIEAWQTLDPRELIGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVSNRLGAEIIRLWIASTDYSGELAISEEILKRVTE-- 670

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                  +Y R R+  R       D D     R V  +  E D   + L
Sbjct: 671 -------SYRRIRNTLRFLLANLSDFDIGKHARPV-GEWLEIDRYAVAL 711


>gi|114606291|ref|XP_518340.2| PREDICTED: valyl-tRNA synthetase 2-like [Pan troglodytes]
          Length = 1150

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 173 ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 231

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 232 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 267

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 268 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 319

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          G    + +    L + G +Y  
Sbjct: 320 GEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVQLYKAGLLYRN 366


>gi|51473609|ref|YP_067366.1| leucyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|60390688|sp|Q68WV8|SYL_RICTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51459921|gb|AAU03884.1| Leucine translase [Rickettsia typhi str. Wilmington]
          Length = 828

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +H+GH R   +GD +A  M   G
Sbjct: 6   QKWQKIWKEEKAFQVSNDSSKPKYYVLEML-PYPSGKIHIGHIRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|23097554|ref|NP_691020.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|30316161|sp|Q8ETZ9|SYC_OCEIH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|22775777|dbj|BAC12055.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 468

 Score = 44.1 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 96/333 (28%), Gaps = 40/333 (12%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+   + + G++V       D   +I   A  V      
Sbjct: 29  CGPTVYNYIHIGNARPAIVFDTVRRYLEYRGFDVDYVLNFTDVDDKIIKTAKDV------ 82

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                +  +    +   YL+ VG     K +                D  +  +  +I  
Sbjct: 83  ---GEEVPVLADRFVNAYLEDVGALGVKKATKNPRVMD-------TMDDIIAFISALIEK 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F                     ++ I         Q  +    
Sbjct: 133 GY-AYEADGDVYFKPRSFDTYGK--------------LSHQSIDELRSGARIQVGEKKED 177

Query: 308 QLLFRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L F       D +        +G   +     A  K    +   + I +          
Sbjct: 178 PLDFALWKQAKDDEIAWKSPWGEGRPGWHIECSAMVK----KHLGDTIDIHAGGQDLTFP 233

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
             E   A  SE           +   Y +    KMSK  G+F+  R ++       +RF 
Sbjct: 234 HHENEIAQ-SEAMNGETFANYWMHNGYINIDNEKMSKSLGNFVLARDLIQAHDPRVLRFF 292

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           ML       ++F   +   +S +  +  +Q AY
Sbjct: 293 MLSVHYRNPINF--TEALLESAKTSLERIQTAY 323


>gi|224532587|ref|ZP_03673209.1| valine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512443|gb|EEF82822.1| valine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|184201515|ref|YP_001855722.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|229558711|sp|B2GFS8|SYC_KOCRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183581745|dbj|BAG30216.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 479

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 128/418 (30%), Gaps = 75/418 (17%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                +  + +  A   G  H+GH R A+V D LA  + F G EVT    + D   +I  
Sbjct: 18  PVHPGEARLYYCGATVQGAPHIGHVRSALVFDVLARWLRFRGLEVTTVRNVTDIDDKILV 77

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK----YSSELLNFPEEKWLPI 232
            + + +               E  Y G + +     LA +    +         ++    
Sbjct: 78  NSRASY---------------EQDYSGDHAREPWWALAYRFEGVFGQAYAALGIDRPTYE 122

Query: 233 VKDYSVQAMMKIIRDDLKALNIQH-------DIFISEDDFHRGDPSPIRDIIDNLARQGY 285
            +       M  +  +L      +       D++     + R      + +         
Sbjct: 123 PRATGHVPEMHALIQELIDAGHAYPATDGSGDVYFDVRSWPRYGELTRQRV--------- 173

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS------DGSYTYFAADLA 339
             E +   P +    K D     L       G   D PL  S       G   +     A
Sbjct: 174 --EDMQDAPDADPRGKRDPRDFALW-----KGRKEDEPLSASWDSPWGRGRPGWHLECSA 226

Query: 340 YFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
                    FD  I+  G D     H   + +  A     +      N  L   +  Y  
Sbjct: 227 MAGKYLGAHFD--IHGGGLDLRFPHHENELAQSTAAGREFA------NFWLHNGLVTYEG 278

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
               KMSK  G+ ++ + ++ E    +VR+ +       +LD+    ++E +        
Sbjct: 279 ---EKMSKSIGNTVSPQDMLREARPLAVRYYLGQAHYRSVLDYRPTSLQEATA------- 328

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             A  R  ++   A+     LD D   ++V  +       +L +   LA     +  A
Sbjct: 329 --AVERVEAVLVAARAAGLGLDRD--TQDVPAEFVAVMDDDLNVPRALAVLHETVRAA 382


>gi|161484947|ref|NP_713894.2| leucyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|32171559|sp|Q8EZY7|SYL_LEPIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|293386231|gb|AAN50912.2| leucyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 863

 Score = 43.8 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 333 YFAADLAYFKCKYERGFDNM---IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINV 383
           Y       F C  E     M   +YV GS+H+     Y +        +     K   + 
Sbjct: 562 YIDPKNGRFLCDPELEKKWMPVNLYVGGSEHAVLHLLYSRFWHKFLFDIGAVSTKEPFDK 621

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           L+ + + L  D    KMSK  G+ +    V+ E G+DS+R   +
Sbjct: 622 LIHQGLILGEDKR--KMSKSLGNVVNPDDVIKEYGADSLRLFEM 663


>gi|253755323|ref|YP_003028463.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817787|emb|CAZ55539.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 667

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 106/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV                 L    +  +    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEV------------FYLTGLDEHGQKIEEKAK 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K    LL+   +K++    DY  + +  +    L  
Sbjct: 63  EAGLTPQAYVDG-------MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVTSGIAPS----GHEVAWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLAYFKCKYERG------ 348
              R +   D      +     ++ DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDKLVEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSN 229

Query: 349 FDNMIYVM-----------GSDHSGYV--------KRLEAVAAAV----SEKKAQINVLL 385
             +++YV            G      V             V   +    S     + ++L
Sbjct: 230 PKHVVYVWIDALLNYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMML 289

Query: 386 CELV--RLYRDG----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              +  RL   G       KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DMKLPDRLVAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|218133115|ref|ZP_03461919.1| hypothetical protein BACPEC_00977 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991988|gb|EEC57992.1| hypothetical protein BACPEC_00977 [Bacteroides pectinophilus ATCC
           43243]
          Length = 516

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 122/334 (36%), Gaps = 55/334 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E + ++A      L +
Sbjct: 34  APSPTGRMHVGNLRTALYAYLIAKHENGDFLLRI-----EDTDQERFFDEA------LDI 82

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                    L +++    +G   G Y++     + +  KY+  L+   E  +        
Sbjct: 83  IYRTMKATGLEHDEGPDKDGG-VGPYVQSERQAQGIYMKYAKMLVEKGE-AYYCFCDKER 140

Query: 238 VQAMMKII---RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           ++++ + +     + K + +     +S            R+ ++     G  +      P
Sbjct: 141 LESLRQTVVGEDGESKEIVVYDKHCLSLS----------REEVEANLAAGKPFVIRQNNP 190

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           +  +T   D     +   +  +    D  L+KSDG  TY   + A     +  G  ++  
Sbjct: 191 REGSTTFHDELYGDVTVPNEELD---DMILMKSDGFPTY---NFANVVDDHLMGITHV-- 242

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+++     +   +  A   ++ +          L  D    K+SKR+G   +   ++
Sbjct: 243 VRGNEYISSSPKYTRLYEAFGWEEPKYIHC-----PLITDENHKKLSKRSGHA-SFEDLI 296

Query: 415 DE--VGSDSVRFMMLWRKNSELL--DFDFCKVKE 444
           ++  V    V ++ L   + E     F   ++ +
Sbjct: 297 EQGFVAEAVVNYVALLGWSPEDNREIFSLDELVK 330


>gi|195327961|ref|XP_002030685.1| GM25585 [Drosophila sechellia]
 gi|194119628|gb|EDW41671.1| GM25585 [Drosophila sechellia]
          Length = 796

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 85/230 (36%), Gaps = 30/230 (13%)

Query: 348 GFDNM--IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G D +  +Y+ G D  +G+ +    ++ A  E      + +        D    KMSK  
Sbjct: 466 GKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGF---TVDEKGYKMSKSL 522

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I+ + +  + GSD++R+ +       +      K+ +Q+ EN         ++ R  
Sbjct: 523 GNVISPKQITKKYGSDALRWWVASHGTQHMSITVSDKLLQQAAEN--------LSKIRGT 574

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R  K +  +          + Q S+       L+  L E+   +E    A E  ++   
Sbjct: 575 LRYLKGVIGE----KQSSENLTQPSDKSYLNRYLLSQLVEFESEVEKLYQAYEYNRVVAC 630

Query: 525 LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + +A+     + H     + R    ++++L         A+   +   
Sbjct: 631 VQNFIANQVSAVYVH---LIKDRLYCGDDQEL--------LAIRQTLTHC 669


>gi|134099214|ref|YP_001104875.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007173|ref|ZP_06565146.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911837|emb|CAM01950.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 375

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 98/320 (30%), Gaps = 36/320 (11%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
                +G  R A++    A +    G       ++  A   +    L+   R    L + 
Sbjct: 2   NSDFVIGGSRVAMLDR--ARVY-ACGVTPYDVTHLGHAATFVWVDVLARVLR----LLDV 54

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELL-----NFPEEKWLPIVKD-----YSVQAMM 242
           + ++         +     E A  Y           F ++     V+       + + + 
Sbjct: 55  EPEVCRNVTDVDDVLDAASERAGAYYDRFAAIHQFQFDDDMAALNVRPPEHEPRAHRYVE 114

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            +IR     L            + RG   P R  ++ L       +    P       K 
Sbjct: 115 SVIRLACGLLGRGAAYSSGGSVYFRGHDVPARAGVERLEALRLARQFGGRP---DDPAKE 171

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD--- 359
           D     +   S       D P     G   + A  +A        G D  I+  G+D   
Sbjct: 172 DEFDVAVWQASEPGHPSWDSPW--GPGRPGWHAECVAMSLSVLGAGVD--IHAGGADLRF 227

Query: 360 --HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
             H+ +    EA        ++  +V    +          KM+K AG+ + L  ++ E 
Sbjct: 228 PHHAYHAAMAEAFTGITPYARSWFHVGTVAV-------AGEKMAKSAGNLVLLGDLLAEH 280

Query: 418 GSDSVRFMMLWRKNSELLDF 437
            SD++R M+L R      D+
Sbjct: 281 SSDTIRLMILDRPWQSSWDY 300


>gi|45656415|ref|YP_000501.1| leucyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798562|sp|Q72UY6|SYL_LEPIC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|45599650|gb|AAS69138.1| leucyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 863

 Score = 43.8 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 333 YFAADLAYFKCKYERGFDNM---IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINV 383
           Y       F C  E     M   +YV GS+H+     Y +        +     K   + 
Sbjct: 562 YIDPKNGRFLCDPELEKKWMPVNLYVGGSEHAVLHLLYSRFWHKFLFDIGAVSTKEPFDK 621

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           L+ + + L  D    KMSK  G+ +    V+ E G+DS+R   +
Sbjct: 622 LIHQGLILGEDKR--KMSKSLGNVVNPDDVIKEYGADSLRLFEM 663


>gi|328777957|ref|XP_001123204.2| PREDICTED: valyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 801

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 32/158 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D LA      G+ V             +   ++     ++ L
Sbjct: 6   PNITGTLHLGHALTVTIQDILARWYRMKGHSVV-------WIPGFDHAGIATQTMVEKYL 58

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +            G+    +GK+    Y  +  N  E                 II+  L
Sbjct: 59  FKT---------KGINKSDIGKDEFLSYIWQWKNEKE----------------NIIKSQL 93

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           KAL    D         +   + + + I  L  +  +Y
Sbjct: 94  KALGASLDWSKEYFTMSKKHNNAVIEAIITLNNRNLLY 131


>gi|319404354|emb|CBI77954.1| glutamyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 471

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 54/304 (17%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I   + +PTG +H+G  R A+     A              +          + L +  
Sbjct: 3   VITRFAPSPTGFLHIGSARTALFNWLYAK-------------HTG------GKMLLRIED 43

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             ++                + L++ G  ++    +E      E+ +   K Y   A ++
Sbjct: 44  TDRERSTEAAVKAIIDGLHWMGLQYEGDPISQFKRAERHRQVAEQLVKDGKAYYCYATLE 103

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            + +            + E+ F +G P+       +        +GI P  + K  Q  +
Sbjct: 104 ELAE------------MRENAFAKGLPARYDGRWRD-RDISEAPKGIKPVIRIKAPQDGE 150

Query: 304 MDRKQLLFRSTMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                 +         D  D  +L+SDGS TY     A     ++ G  ++I   G+DH 
Sbjct: 151 TILHDRVQGDIRFPNKDLDDFIILRSDGSPTYMH---AVVVDDHDMGVTHIIR--GNDHL 205

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+        + +   + L       K+SKR G           +G D+
Sbjct: 206 TNAARQAIIFNAMGWD-----IPVMAHIPLIHGENGAKLSKRHG----------ALGIDA 250

Query: 422 VRFM 425
            R M
Sbjct: 251 YRKM 254


>gi|315179050|gb|ADT85964.1| valyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 244

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEKGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|195376029|ref|XP_002046799.1| GJ12288 [Drosophila virilis]
 gi|194153957|gb|EDW69141.1| GJ12288 [Drosophila virilis]
          Length = 991

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 105/377 (27%), Gaps = 81/377 (21%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           L+P Y  K++     +  +  +  +    K     +     N TG +H+GH   A V D 
Sbjct: 41  LAPGYQPKVVEEAYWAREKEPKKEVLTSCKRGTYRMILPPPNVTGNLHLGHALNATVQDV 100

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A      GYEV      + AG     +                               V
Sbjct: 101 IARQERQLGYEVEWVPGTDHAGIATQVV-------------------------------V 129

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + LA    +         +L  V  +  +     I  DL+ L         E ++   D
Sbjct: 130 ERTLAATKGTTRQEIGRTAFLEEVWKWKAEKG-AGIVQDLRQLG---CTLNWEHEYFTMD 185

Query: 270 PS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
                 +    + L  +G +         S   +    D   +   +  + + ++  +  
Sbjct: 186 DKQALAVNVAFERLFDEGLIKRRNSLVNWSCALRSAISD---IEVETVEIKEPIEIAVPG 242

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            D                + R FD    V+G          +  A  +     +   +L 
Sbjct: 243 YD------------HNVLFGRIFDIAYRVVGGQ-----TEEDGTAEEIVVSTTRPETILG 285

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRH--------------VVDEVGSDSVRFMMLWRKNS 432
           ++      G P     R+ + + LRH              V  E G+ +V+         
Sbjct: 286 DVAVAVNPGDPRYSKYRSREEVKLRHPFRGDTIPLIFDLSVDREFGTGAVKI------TP 339

Query: 433 ELLDFDFCKVKEQSKEN 449
               FDF        E 
Sbjct: 340 AHDKFDFELASRHKLEG 356


>gi|251772727|gb|EES53289.1| isoleucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 948

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 86/258 (33%), Gaps = 46/258 (17%)

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +   +    D  AR+ ++ +   P   SK  +K + D   + F S   G   +  L K  
Sbjct: 507 EKEGLDFWFDEAARKDFLKDSPCPHCGSKAVEK-EKDILDVWFDS---GVSHEAVLKKRA 562

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
           G+               +   D  +Y+ GSD   G+       A A+       +VL   
Sbjct: 563 GA---------------KWPAD--LYLEGSDQHRGWFHSSLLTAMALEGTPPYRSVLTHG 605

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    DG   KM+K  G+ I+ + + D+ G+D +R         E        V     
Sbjct: 606 FVV---DGQGRKMAKTLGNVISPKEITDKYGADVLRLWAASADYQEDTRLSPEIV----- 657

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            N V     +Y + R+  R       D      P+ V     +       L    +++  
Sbjct: 658 NNTVD----SYRKIRNTVRFILSNLYDFADSEKPKTVSADPLDG----WAL----SQWEE 705

Query: 508 V---IENAT-IAQEPYKL 521
           V   I  A    +  + +
Sbjct: 706 VKREILAAYDEKRFAHVI 723


>gi|17065234|gb|AAL32771.1| similar to valyl tRNA synthetase [Arabidopsis thaliana]
 gi|38564252|gb|AAR23705.1| At1g14610 [Arabidopsis thaliana]
          Length = 1064

 Score = 43.8 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 64/236 (27%), Gaps = 38/236 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   +       +  +         I     N TG +H+GH   + + DT+   
Sbjct: 97  SPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRW 156

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +                           
Sbjct: 157 KRMSGYNALWVPGVDHAGIATQVVVEKKIMRDR--------------------------- 189

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E+++  V  +  Q     I   L+ L    D               +
Sbjct: 190 ----GMTRHDVGREEFVKEVWKWKNQYG-GTILTQLRRLGASLDWSRECFTMDEQRSKAV 244

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
            +    L ++G +Y  I         +    D +          D  ++ LLK  G
Sbjct: 245 TEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVE------VEYIDIKEKTLLKVPG 294


>gi|323137155|ref|ZP_08072234.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397513|gb|EFY00036.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 877

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 4/72 (5%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N         +         +              +E     P+G +H+GH R   +GD 
Sbjct: 7   NF---AEAEPRWQKIWEEKQVFKAGVNASAPKYYVLEMF-PYPSGRLHMGHVRNYSMGDV 62

Query: 150 LASLMAFSGYEV 161
           +A  M   GY+V
Sbjct: 63  IARYMRAKGYDV 74


>gi|293610939|ref|ZP_06693238.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826591|gb|EFF84957.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 965

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGVTRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193



 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 61/457 (13%), Positives = 133/457 (29%), Gaps = 99/457 (21%)

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLP 231
            +A +    +   +   D   P G   GV ++              +   +   ++  + 
Sbjct: 350 LVAQAEAEGWLDQIQPYDLKAPRGDRSGVIIEPLLTDQWYVKIAPLAEPAIEAVQDGRIK 409

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYE 288
            V +      M  +R+ ++   I   ++        +       +    + +  +  +  
Sbjct: 410 FVPEQYSNMYMAWMRE-IQDWCISRQLWWGHRIPAWYDANGNIYVGRNEEEVRAKNNIAA 468

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +                  L   ST+      +    +D   T+   D+         G
Sbjct: 469 DVELKQDEDVLDTWFSS--ALWTFSTLGWTGDAQKDAANDFLKTFHPTDV------LVTG 520

Query: 349 FDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           FD +I+   +     + +  + E  ++ V  K   ++        L RDG   KMSK  G
Sbjct: 521 FD-IIFFWVARMIMMTLHFMKNEDGSSQVPFKTVYVH-------GLVRDGEGQKMSKSKG 572

Query: 406 DFITLRHVVDEV-------------------------------------GSDSVRFMMLW 428
           + +    ++D +                                     G+D+VRF    
Sbjct: 573 NVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYGTDAVRFTFCA 632

Query: 429 RKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             N+   + FD  +V+                 C  I       F  ++ +        +
Sbjct: 633 LANTGRDIKFDLKRVEGYRNF------------CNKI--WNATRFVLMNVEGQTVGQQAR 678

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS----VF--HGH--WSHG 539
              ++  E  +I  L +    +  A         A Y  DLA+     F  + +  W   
Sbjct: 679 PDLWELPEQWIISRLQKAEAAVHQAF--------ATYRLDLAAQAIYDFIWNEYCDWYVE 730

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
              P L   + +  +   +R  L+     ++ + L +
Sbjct: 731 LTKPVLNDAEVSEERKAEVRRVLLA----VMEASLRL 763


>gi|237736433|ref|ZP_04566914.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421475|gb|EEO36522.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 933

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 91/267 (34%), Gaps = 37/267 (13%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISED 263
            V  E +D     L      +++P      + +M++   D      +   +   +F +E+
Sbjct: 416 FVKAEGSDLRERALKALDNVEFVPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFYNEE 475

Query: 264 D----FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
                +++   + I +I+       ++          +  +K ++    L   + ++   
Sbjct: 476 TGKEIYNKEILARIVEIVKKEGTAAWLTHTAEELIGEELLEKYNLKGVTLRKETNIMDVW 535

Query: 320 VD-----RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAA 373
            D     R +L++ G   +  AD+               Y+ GSD   G+ +     +  
Sbjct: 536 FDSGVSHRSVLETRGELLHRPADM---------------YLEGSDQHRGWFQTSLLTSIG 580

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            +       +L    V    DG   KMSK  G+ +    V+   G+D +R         E
Sbjct: 581 STHDAPYKKILTHGFVN---DGEGKKMSKSVGNVVVPADVIKVYGADILRLWCASVDYRE 637

Query: 434 LLDFDFCKVKEQSK-----ENPVFYVQ 455
            +      +K+ ++      N   Y+ 
Sbjct: 638 DVKISDNILKQMAEAYRRVRNTARYIL 664


>gi|51892369|ref|YP_075060.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826163|sp|Q67Q27|SYI_SYMTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51856058|dbj|BAD40216.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 938

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 16/170 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ K     A    + K     +L     +   G   KMSK  G+ +   
Sbjct: 556 LYLEGSDQHRGWFKSSLLTAVVARDGKPPYKAVLTHGFTVDEQGR--KMSKSLGNVVDPA 613

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R  +        +      +K+ +          AY + R+  R     
Sbjct: 614 DVIKRYGADILRLWVASTDYRHDMALSENILKQVAD---------AYRKIRNTLRYLLGN 664

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D + D    +++ ++   +    Q +  L E  R +  A    E + +
Sbjct: 665 LYDFNPD---TDMVERDDLLEIDRWQ-MHRLQEVIRKVTEAYREYEYHIV 710


>gi|15595083|ref|NP_212872.1| valyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|226321435|ref|ZP_03796962.1| valyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|3915080|sp|O51680|SYV_BORBU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2688666|gb|AAC67078.1| valyl-tRNA synthetase (valS) [Borrelia burgdorferi B31]
 gi|226233231|gb|EEH31983.1| valyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|332638749|ref|ZP_08417612.1| methionyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 664

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 118/345 (34%), Gaps = 70/345 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    V+ D  A        +V      ++ G +I   A  +    QQ    
Sbjct: 16  PSGKLHIGNTYTTVLADAAARYHRLLNEDVYFLTGTDEHGLKIEQKAEKLNMTPQQ---- 71

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                        Y+  +  ++   ++   L+   + ++    D+  +A+ KI +  L  
Sbjct: 72  -------------YVDGMAADIQKLWAD--LDITNDGFIRTTDDFHEKAIQKIFQQFLDQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   +++ + S DD      S + ++  +   +   G    G       + +    M 
Sbjct: 117 DDIYKGEYEGWYSVDDEEYFTESQLAEVYRDENGKVIGGKAPSGHEVELVKEESYFFRMG 176

Query: 306 RKQLLFRSTMVG-DDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMIY 354
           +             +  +P  + +   + F      DLA  +  ++ G        +++Y
Sbjct: 177 KYADWLLDYYKSHPEFIQPESRMNEMISNFIKPGLEDLAVTRTAFKWGVPVLSDPKHVVY 236

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL--------- 391
           V              GSD +    +   A    V ++  + + +   ++           
Sbjct: 237 VWIDALSNYITALGYGSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLPLPKQ 296

Query: 392 --------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                    RDG   KMSK  G+ +    + D  G D+VR+ +L 
Sbjct: 297 VLGHGWLTMRDG---KMSKSKGNVVYPDTLADRYGIDAVRYYLLR 338


>gi|324994961|gb|EGC26874.1| methionine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327462997|gb|EGF09318.1| methionine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 665

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 108/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-------------GSD-HSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV              G D H+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|223889484|ref|ZP_03624070.1| valyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885170|gb|EEF56274.1| valyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|148976360|ref|ZP_01813066.1| glutamyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145964183|gb|EDK29439.1| glutamyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 475

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 95/280 (33%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MQWMGMEWDEGPYYQSKRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + I  N A Q G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMARYDANHPKIIAANEAAQEGDACVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|115688442|ref|XP_001200958.1| PREDICTED: similar to valyl-tRNA synthetase 2 [Strongylocentrotus
           purpuratus]
 gi|115730955|ref|XP_781671.2| PREDICTED: similar to valyl-tRNA synthetase 2 [Strongylocentrotus
           purpuratus]
          Length = 1119

 Score = 43.8 bits (102), Expect = 0.076,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 76/253 (30%), Gaps = 45/253 (17%)

Query: 94  SPSYLRKILSSIVVSGIEY-------GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SPSY+             +        RN + +     +     N TG +H+GH     +
Sbjct: 163 SPSYVEACWYDWWHKMGFFKPESLAKWRNPVEEKEPFVMCLPPPNVTGVLHLGHTLTTTI 222

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D+L       G         + AG     +                 +    +  G+  
Sbjct: 223 QDSLIRWKRMVGVPSLWIPGCDHAGIATQVV----------------VEKQIHHEKGITR 266

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
           + +G+E   ++  E+  + EEK                I   L+ L    D         
Sbjct: 267 QDMGRE---EFIKEVWRWKEEKG-------------GEIYQQLRQLGASLDWDRDNFTMD 310

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDVDR 322
           +     +R+    L   G +Y        S T        ++D+  L  RS++       
Sbjct: 311 QKFSHAVREAFVRLHDDGIIYRSSQLVNWSCTLNSAISDIEVDQMSLPGRSSLKVPGYAD 370

Query: 323 PLLKSDGSYTYFA 335
           P+    G  TYFA
Sbjct: 371 PVEF--GVLTYFA 381


>gi|332797027|ref|YP_004458527.1| valyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694762|gb|AEE94229.1| valyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 816

 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 31/216 (14%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           NL+LS  Y  K+          +  +         I+      +G +H+GH     + D 
Sbjct: 29  NLWLSKEYWEKV----------FRFDEKSNKPVFYIDTPPPFTSGELHMGHAYWVTIADA 78

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +A      GY V           Q   L   +  +Y+  +   + +L             
Sbjct: 79  IARFKKLQGYNVL---IPQGWDTQG--LPTELKVQYKLGIPKENREL-----FLQKCIEW 128

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQ----AMMKIIRDDLKALNIQHDIFISEDDF 265
             E+ ++  + ++      + P  +D+  +       K+I+  L  +     + I E   
Sbjct: 129 TNEMINRMKTAMIRLG---YRPDWEDFEYKTYSPEYRKVIQKSLIDMYKMGIVKIKEGPV 185

Query: 266 H---RGDPSPIRDIIDNLARQG-YVYEGILPPPKSK 297
           +   + + +  +  +  L ++G  VY G       +
Sbjct: 186 YWCPKCETAVAQSEVGYLEKEGVLVYIGFPLKAGGE 221



 Score = 37.2 bits (85), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    V+E G+D++R  +L     E   F + 
Sbjct: 528 FKQVLINGQVLGPDG--SRMSKSKGNVVSPLERVNEFGADAIRMTLLDASIGEDFPFKWD 585

Query: 441 KVK 443
            V+
Sbjct: 586 NVR 588


>gi|307297704|ref|ZP_07577510.1| glutamyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916964|gb|EFN47346.1| glutamyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 482

 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 100/293 (34%), Gaps = 55/293 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR---EYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+     A       ++     +++R   EY         + L  
Sbjct: 7   APSPTGYLHVGGARTALFNYLFARHYGGKLVLRVEDTDISRSTKEY--------EDQLME 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W         D     G   G Y +     +  +   +LL   +         Y V 
Sbjct: 59  SLLWLGITWDEGPDV----GGAFGPYRQSERGPIYREMIGDLLQRGQA--------YEVH 106

Query: 240 AMMKIIRDDLKALNIQHDIFISE-----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           A  + I +        HD  +SE      D    +     + I     +G     +    
Sbjct: 107 AYPEEIEE-------LHDKLLSEGKAPHYDQEMLEAFNTDERISEFESKGL-RPVVFFKM 158

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
             K  +  D+ + +++F+   +GD     +++S+G   Y  A +A           ++I 
Sbjct: 159 PRKEYRLPDLIKGEVVFKEGAIGDF---VIMRSNGQPIYNFAVVA---DDITMEISHVIR 212

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             G DH     R  A+  A          +    + L  DG   K+SKR GD 
Sbjct: 213 --GDDHLSNTLRQLALYEAFGAPIPSFAHVS---MILGPDGK--KLSKRHGDT 258


>gi|294102248|ref|YP_003554106.1| glutamyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617228|gb|ADE57382.1| glutamyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 439

 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 66/199 (33%), Gaps = 37/199 (18%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           + ++D           I   P+  +    D+   ++  RS  +    D  ++KSDG  TY
Sbjct: 97  QQLLDEGKAYTEGPAIIYKVPEGISLAFDDIVYGRIEVRSETL---KDIVMIKSDGMPTY 153

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
              + A     Y  G + +I   G DH     +   +  A+  ++ Q        + +  
Sbjct: 154 ---NYAVVIDDYTMGINYVIR--GEDHISNTPKQLLIYKALGWEEPQFAH-----LPMIL 203

Query: 394 DGMPIKMSKRAG--DFITLRHV--------------------VDEV--GSDSVRFMMLWR 429
                K+SKR G       R +                      EV    ++++   L R
Sbjct: 204 GKDKKKLSKRHGATSVYEYRDLGYMPDSVFNFLAILGWSPGDDREVFSREEAIKLFDLKR 263

Query: 430 KNSELLDFDFCKVKEQSKE 448
                  FD  K+   ++E
Sbjct: 264 VTKRAAVFDMDKLNFINQE 282


>gi|157964504|ref|YP_001499328.1| leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|166980080|sp|A8F1J5|SYL_RICM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157844280|gb|ABV84781.1| Leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQHIWQEEKAFEVSNASSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|218533022|ref|YP_002423838.1| glutamyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218525325|gb|ACK85910.1| glutamyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 474

 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 91/289 (31%), Gaps = 40/289 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A    F G  + R     D          ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYAR--RFGGRMLLRIE-DTDRERSTQGAIDAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    + D D+   +      + V + L     +    +   + L  +++ +     
Sbjct: 61  DGMRWLGLDWDGDVIYQFARAERHREVAESLLAS-GNAYHCYASAEELTQMRETARAEGR 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               D         D   SE       P+ ++ +I            +  P + +T  + 
Sbjct: 120 APRYD-----GRWRDRDPSEA------PAGVKPVI-----------RLRAPSEGETVVED 157

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +  +          D  D  LL+SDG+ TY    LA     ++ G   +I   G DH  
Sbjct: 158 AVQGRVTW----ANRDLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTQVIR--GDDHLT 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+      +       + L       K+SKR G      
Sbjct: 209 NAARQSQIYRALGWDVPAMAH-----IPLIHGADGAKLSKRHGALGVEE 252


>gi|90411869|ref|ZP_01219877.1| valyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327127|gb|EAS43499.1| valyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 957

 Score = 43.8 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 60/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I   L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESG-GNITQQLRRLGASVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLFEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|325688905|gb|EGD30913.1| glutamate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 485

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L    +  
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREAAGIIPTVRLAVNDAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWIDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|254511478|ref|ZP_05123545.1| glutamyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535189|gb|EEE38177.1| glutamyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 468

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 91/289 (31%), Gaps = 41/289 (14%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G  + R     D          ++ 
Sbjct: 4   QVVTRFAPSPTGFLHIGGARTALFNWLYAR--GRRGKFLLRIE-DTDRERSTPEATAAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    ++D D+   +        V + L  +       F  ++ +   ++ +     
Sbjct: 61  QGMEWLGLDHDGDVISQFEGAARHAEVAQHLLAE-GKAYKCFSTQEEIAAFREQA----- 114

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
                       +    +    +   DP+   D           +   +  P+  TT   
Sbjct: 115 ----------RAEGKSTLFRSPWRDADPATHPD---------LPFVIRIKSPQDGTTIIR 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G DH  
Sbjct: 156 DQVQGDVTIRNDQLD---DMILLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHLN 207

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   +  A+        V +   + L       K+SKR G      
Sbjct: 208 NAARQMMIYEAMGWD-----VPVWAHIPLIHGPDGKKLSKRHGALGAQE 251


>gi|159905582|ref|YP_001549244.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159887075|gb|ABX02012.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 1034

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 27/187 (14%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G+D  + +     A++A V +  +    ++        D    KMSK  G+ ++   V +
Sbjct: 558 GNDQVTKWFYSQHALSAVVFDDTSYEKCMMHGF---TLDETGEKMSKSLGNIVSPDDVTE 614

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G+D +RF +L    + E L F + ++ E        +  YA++    +          
Sbjct: 615 QYGADVLRFYLLSANKAWEDLRFSYSEMDETRSMLNTLWNSYAFSANYMVL--------- 665

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLAFY---LYDLA- 529
              D F  N    +   D         L+    V + A  A E P+ L  Y   L D   
Sbjct: 666 ---DDFVPNDEYFKHVKDEDAW----ILSRINTVAKEAVEALEKPH-LHTYTWTLRDFVL 717

Query: 530 SVFHGHW 536
           + F   +
Sbjct: 718 NDFSRWY 724


>gi|91202863|emb|CAJ72502.1| strongly similar to isoleucine tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 938

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 26/179 (14%)

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           + + E  +   +Y+ G+D      +L  + +  +  KA    +L        D M  KMS
Sbjct: 553 RKRSELEYPADLYLEGTDQHRGWFQLSLIPSVGAWGKAPFKSVLTHG--FVVDEMGEKMS 610

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+FI++  ++ E G+D +R           +      +   S          AY R 
Sbjct: 611 KSIGNFISVEDILKEFGADILRLWTSSMDYQHDMGVSRNLINRCSD---------AYRRI 661

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHL------AEYPRV 508
           R+ FR       D +      N IP ++  +           LI  +       ++ +V
Sbjct: 662 RNTFRYLLSNLYDFN---PHENAIPHDALLEIDRWAIHKTQELIKQITVNYETLQFHKV 717


>gi|328953428|ref|YP_004370762.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453752|gb|AEB09581.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 832

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 63/205 (30%), Gaps = 22/205 (10%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +             +    +   +K  +  +   P+G +H+GH R   +GD +A
Sbjct: 4   RYNPAVIEAKWQQYWEEQDLFRVTELSDKSKYYVLEMFPYPSGRIHMGHVRNYTIGDVVA 63

Query: 152 S--------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
                    ++   G++       N A A     A    W Y+   Y     L    Y  
Sbjct: 64  RYKHMQGFNILHPMGWDAFGMPAENAALAHGVHPAA---WTYENIDYMR-RQLKSLGYSY 119

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPI---------VKDYSVQAMMKIIRDDLKALNI 254
            + + +     D Y  E   F E     +           D+    +     +D      
Sbjct: 120 DWSRELATCDPDYYRWEQSVFIEMFRRGLAYKKLSPVNWCDHCQTVLANEQVEDGACWRC 179

Query: 255 QHDIFISE-DDFHRGDPSPIRDIID 278
              + + E + +       + ++++
Sbjct: 180 HQPVALRELEQWFFKITDYVEELLE 204


>gi|302036441|ref|YP_003796763.1| isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604505|emb|CBK40837.1| Isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 939

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 19/171 (11%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+             +     VL    V    DG   KMSK AG+ +  +
Sbjct: 572 LYLEGSDQHRGWFHSALLAGVITDHRAPYKAVLTHGFV---LDGAGRKMSKSAGNVVAPQ 628

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ + G++ +R  +  +   E L      +    +         AY + R+  R     
Sbjct: 629 DVIKQSGAEILRLWVSAQDYREDLRISQEILNHLIE---------AYRKIRNTCRFLLSN 679

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY-PRVIENATIAQEPYKL 521
             D D     ++ +P E   +     L+  L +  PR +       E + +
Sbjct: 680 LYDFD---PAQHRVPFEQLPELDRWALMR-LGDLVPR-VRKGYDEFEFHTI 725


>gi|198282724|ref|YP_002219045.1| glutamyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667373|ref|YP_002424918.1| glutamyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|238689969|sp|B5EMF9|SYE1_ACIF5 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|198247245|gb|ACH82838.1| glutamyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519586|gb|ACK80172.1| glutamyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 466

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 97/303 (32%), Gaps = 48/303 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G+ + R   I D    +            + 
Sbjct: 8   APSPTGYLHIGGVRTALYSWLHAR--RQGGHFILR---IED--TDVERSTPEATVAILEG 60

Query: 189 LYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKII 245
           +     D  EG +Y             D+Y   L         +        V+AM +  
Sbjct: 61  MAWLGLDWDEGPFYQ--------MRRMDRYREVLAQMLAAGTAYHCYCSREEVEAMREDQ 112

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R   +    ++D    E        +P+                    P    T   D+ 
Sbjct: 113 RQ--RGEKPRYDGRCRERTTVPEGVAPV---------------IRFRSPDDGETVVEDLI 155

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              + F+++ +    D  + +SDG+ TY   +       ++ G  ++I   G DH     
Sbjct: 156 HGTVRFQNSEMD---DLIIARSDGTPTY---NFCVVVDDWDMGITHVIR--GDDHLNNTP 207

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           R   +  A+  +     V +   V +       K+SKR G    L +       D++   
Sbjct: 208 RQMQILQALGAR-----VPVYAHVPMILGPDKQKLSKRHGAVSVLEYREQGFLPDALLNF 262

Query: 426 MLW 428
           ++ 
Sbjct: 263 LVR 265


>gi|218249873|ref|YP_002375236.1| valyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|218165061|gb|ACK75122.1| valyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|216264415|ref|ZP_03436407.1| valyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980888|gb|EEC21695.1| valyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|163791190|ref|ZP_02185607.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873521|gb|EDP67608.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 468

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 99/322 (30%), Gaps = 30/322 (9%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  KV +          +H+G+ R  V  DT+   + + GY+V    Y+++     + 
Sbjct: 17  PIEEGKVRMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYDV---NYVSNFTDVDDK 73

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
           +  +   +         +D     Y       +G E A  +   + N P+      + D+
Sbjct: 74  IIRTA--KELNLTAPEVADKFIAAYH-EDTHALGVEEASHHPRVMENMPD------IIDF 124

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
               + K       A  +  D++     F   +   + DI  +    G            
Sbjct: 125 IAVLIEKEY-----AYEVDGDVYYRTRKF--KNYGELSDISIDELEVG----ASNRLNAQ 173

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +K D     L   +     + + P       +    + +A       +   + I + 
Sbjct: 174 ENNKKEDPLDFALWKAAKEAEINWESPWGPGRPGWHIECSVMAT------KYLGDTIDIH 227

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                      E   A    K          +   +      KMSK  G+F+ +  ++ +
Sbjct: 228 AGGQDLAFPHHENEIAQSEAKTGHP-FAHYWMHNGFVTMDNEKMSKSLGNFVLVHDIIKQ 286

Query: 417 VGSDSVRFMMLWRKNSELLDFD 438
           V    +RF M   +    + + 
Sbjct: 287 VDPQILRFFMATTQYRRPISYS 308


>gi|113868709|ref|YP_727198.1| valyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|113527485|emb|CAJ93830.1| Valyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 955

 Score = 43.8 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 69/241 (28%), Gaps = 40/241 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        GI        +     I+    N TG +H+GH     + D LA     SG
Sbjct: 19  AKWGPEWEKRGIAKPTFDPARPD-FAIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMSG 77

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                    + AG   QI      V  R  ++              GV    +G+E   K
Sbjct: 78  ANTLWVPGTDHAGIATQI------VVERQLES-------------QGVSRHDLGRE---K 115

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           ++ ++  + EE    I +              ++ +    D               + + 
Sbjct: 116 FTEKVWAWKEESGSTITRQ-------------VRRMGASIDWSREYFTMSPEMSKAVTEA 162

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--GSYTYF 334
              L  QG +Y G               D +            +  PL+++D  G  T+ 
Sbjct: 163 FVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVDSIEEEGSLWHIHYPLVEADAKGGLTHL 222

Query: 335 A 335
            
Sbjct: 223 T 223


>gi|326404441|ref|YP_004284523.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051303|dbj|BAJ81641.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 864

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +     +                 G+     +E     P+G +H+GH R   +GD +A
Sbjct: 13  FTAAEARWQAAWEARNCFATADAPQGGRRKCYVLEMF-PYPSGKIHMGHVRNYAIGDVIA 71

Query: 152 SLMAFSGYEV 161
                 GY+V
Sbjct: 72  RARRAQGYDV 81


>gi|312170931|emb|CBX79190.1| valyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 951

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPHGNTSEESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|309811151|ref|ZP_07704947.1| valine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434881|gb|EFP58717.1| valine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 904

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 20/164 (12%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+  T   VV E G+D+VR+     +      +D  ++K   +      
Sbjct: 606 DPDRKKMSKSKGNAQTPEDVVREFGADAVRYWAASGRLGTDAAYDTGQMKVGRR------ 659

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +                + PD D       ++P  ++    ++ L+  L     V+ENAT
Sbjct: 660 LAMKVLNASKFALMTPPVTPDADAAPTVEALLPHVTQ--PLDVSLLTAL---RDVVENAT 714

Query: 514 IAQEPYKLA-FYLY--DLASVFHGHWSHGRENPRLRFVQANNRK 554
            + +       Y    +L   F   W+   +   L   +ANNR 
Sbjct: 715 KSFQ----TWDYTRSLELTETF--FWAFCDDYIELVKERANNRD 752


>gi|296272197|ref|YP_003654828.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096372|gb|ADG92322.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 821

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + K   +  +    +  +   K  K  I  +   P+G +H+GH R   +GD  A  
Sbjct: 4   NPQEIEKKWQNYWLENNSFEPSDDTKKDKKYILSMFPYPSGRIHMGHVRNYCLGDAFARF 63

Query: 154 MAFSGYEV 161
              S + V
Sbjct: 64  FRKSNFNV 71


>gi|292486862|ref|YP_003529732.1| valyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292900741|ref|YP_003540110.1| valyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200589|emb|CBJ47720.1| valyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291552279|emb|CBA19316.1| valyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 951

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPQDIEQPLYEHWEQQGYFKPHGNTSEESFCIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLE 187


>gi|257790203|ref|YP_003180809.1| leucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257474100|gb|ACV54420.1| leucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 859

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       + +        K  K  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  RWQKEWDDADLYKVTEDPSKSKKYVLEMF-PYPSGDIHMGHVRNYTIGDVVARYYKMRGF 72

Query: 160 EV 161
           +V
Sbjct: 73  DV 74


>gi|220936373|ref|YP_002515272.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782451|sp|B8GQR1|SYI_THISH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219997683|gb|ACL74285.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 937

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 103/328 (31%), Gaps = 53/328 (16%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            +  E A+     L    + +W+P      ++ M        I R     + I   + + 
Sbjct: 422 FISMEQAELREQALKAIQQVQWVPQWGQARIEGMVSGRPDWCISRQRNWGVPIPLFVHLE 481

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP----KSKTTQKCDMDRKQLLFRSTMVG 317
               H   P+ I  +   +  QG      L P     K     +   D   + F S    
Sbjct: 482 TGRLHPDTPALIEAVAQRIEAQGIEAWFSLDPQELLGKDAAAYQKVSDTLDVWFDS---- 537

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSE 376
                      G       D      + E G    +Y+ GSD   G+ +     + A+  
Sbjct: 538 -----------GVTHATVTD-----KRAELGLPADLYLEGSDQHRGWFQSSLLTSVAMRG 581

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
                 VL         D    KMSK  G+ +  + VVD +G+D +R  +     S  + 
Sbjct: 582 TAPYKAVLTHGF---TVDAQGQKMSKSKGNVVAPQKVVDTLGADILRLWVAATDYSAEMA 638

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD---LFPRNVIPQESEFDT 493
               ++ +++ +        AY R R+  R         D     L P  ++P +     
Sbjct: 639 VS-DEILKRTAD--------AYRRMRNTARFLLANLTGFDPARDMLAPGQMLPLDRWAVD 689

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKL 521
             L++          +  A    + +++
Sbjct: 690 QALKVQQK-------VTGAYEQYQFHQI 710


>gi|116254456|ref|YP_770294.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384448|sp|Q1MA25|SYL2_RHIL3 RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|115259104|emb|CAK10215.1| putative leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNADPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|30316338|sp|Q8U227|SYC_PYRFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 111/380 (29%), Gaps = 98/380 (25%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D                           
Sbjct: 37  HLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTD--------------------------- 69

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +     + A +   +     E               +KI  +D++AL ++ 
Sbjct: 70  ---------IDDKIIKRARETGEDPKELAER-------------FIKIFLEDMEALKVKP 107

Query: 257 DIFISEDDFHRGDPSPIRDIID---NLARQGYVYEG----------ILPPPKSKTTQKCD 303
                  D +      I DII+    L  +GY YEG               K    +  D
Sbjct: 108 ------ADIYPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIED 161

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGFD 350
           + +   +       +  D  L K              +G   +               FD
Sbjct: 162 LQKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFD 221

Query: 351 NMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             I+  G+D     H   + + EA           +   L     + +     KMSK  G
Sbjct: 222 --IHGGGNDLIFPHHENEIAQSEAC-----FGHEWVKYWLHTGFVMVKG---EKMSKSLG 271

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +F+T+R ++     + +RF +L +     L++    +  Q  +N +  +       R   
Sbjct: 272 NFVTIRELLKRYEPEVIRFFVLQKHYRSPLEYTEEGL--QHAKNNLQRLYNTLENIRVAL 329

Query: 466 RQAKDIFPDLDFDLFPRNVI 485
           R A+  +   + +     +I
Sbjct: 330 RNAEISYTWGELEFKTYEII 349


>gi|13473467|ref|NP_105034.1| leucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|32171580|sp|Q98EU7|SYL_RHILO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14024216|dbj|BAB50820.1| leucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +     +   RN   K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  KWQKAWAEKKLFEARNDDPKPKYYVLEMF-PYPSGRIHIGHTRNYTMGDVVARYKRAKGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|125973752|ref|YP_001037662.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004483|ref|ZP_05429462.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417908|ref|ZP_06248928.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231601|sp|A3DEU0|SYL_CLOTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|125713977|gb|ABN52469.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991488|gb|EEU01591.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409310|gb|EFB39568.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940054|gb|ADU74088.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 825

 Score = 43.8 bits (102), Expect = 0.079,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 27/120 (22%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K     +       R    K     +E     P+G +H+GH R   +GD +A     +G+
Sbjct: 11  KWQKKWLEEKAFAVREDESKKKYYVLEMF-PYPSGNLHMGHVRNYSIGDVVARFKRMNGF 69

Query: 160 E------------------VTREYYINDAG--------AQINTLALSVFWRYQQALYNND 193
                              + R  + ND           Q+  L +S  W  + A  + D
Sbjct: 70  NVLHPMGWDAFGLPAENAAIKRGVHPNDWTWSNIDNMRRQLKQLGISYDWDREVATCHPD 129


>gi|315301164|ref|ZP_07872433.1| glutamyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630467|gb|EFR98331.1| glutamyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 491

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 104/304 (34%), Gaps = 35/304 (11%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +V + + + +PTG +H+G+ R A+     A              + ND G  I  + 
Sbjct: 3   KTKRVRVRY-APSPTGFLHIGNARTALFNYLFAR-------------H-ND-GDFIIRIE 46

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---D 235
            +   R  +     +S +    + G+     G ++  KY     +  +  + P+++   D
Sbjct: 47  DTDAKRNVE--DGEESQMKNLKWLGID-WDEGVDVPGKYGPYRQSERQSIYEPLIQKLLD 103

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             +        D+L A   +         +        ++       QG+        P 
Sbjct: 104 EGLAYKCYCTEDELDAEREKQKANGEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFKVPA 163

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
           ++T    DM +  + F S  +GD     + K DG  TY   + A     +     +++  
Sbjct: 164 NQTITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISHVLR- 216

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G DH     +   +  A   +      +      L  +    K+SKR G  I       
Sbjct: 217 -GDDHISNTPKQLLIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFIEQYR 270

Query: 416 EVGS 419
           ++G 
Sbjct: 271 DLGY 274


>gi|261253956|ref|ZP_05946529.1| valyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937347|gb|EEX93336.1| valyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 957

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQAWEEKGYFKPHGDTTKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|256061087|ref|ZP_05451242.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325089|ref|ZP_05964286.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301069|gb|EEY04566.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 515

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 103/338 (30%), Gaps = 34/338 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               S F R  + L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R D      Q     ++ E+ +     +    ++D L 
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLD-LY 179

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD---- 337
                  G + P + +      +         +    D   P+ + +    Y   D    
Sbjct: 180 ENN---PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPRDEKHVMYVWVDALTN 236

Query: 338 ----LAYFKCKYERGFDN--MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
               L Y     ER        +++G D    + R  AV        AQ+ +        
Sbjct: 237 YITALGYPDTTDERWAYWPANAHIIGKD----ISRFHAVYWPAFLMSAQLPLPKRVFAHG 292

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +      KMSK  G+ I    +V+  G D +R+ ++  
Sbjct: 293 FLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMRE 330


>gi|241667151|ref|ZP_04754729.1| methionyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875704|ref|ZP_05248414.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841725|gb|EET20139.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 673

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 46/144 (31%), Gaps = 14/144 (9%)

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G FI  R  +D +    +R+    R  S + D D    +  +K N       
Sbjct: 328 GKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNS----DI 383

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                    R A  I+   D  L          E    EL+     A+  R I  A   +
Sbjct: 384 VGKVVNIASRCAGFIYKKFDATLAN--------EVLDKELE--KEFAKSHRAITEAFEKR 433

Query: 517 EPYKLAFYLYDLASVFHGHWSHGR 540
           E       +  LA   +    H +
Sbjct: 434 EFAHAVRLIMTLADKANQFIDHHK 457


>gi|225551776|ref|ZP_03772719.1| valyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371571|gb|EEH00998.1| valyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDILVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D               + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSRERFTLDESLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|91215377|ref|ZP_01252348.1| glutamyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186329|gb|EAS72701.1| glutamyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 505

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 95/290 (32%), Gaps = 44/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G  + R   I D     N          ++ 
Sbjct: 10  APSPTGPLHIGGVRTALYNYLFAK--KHQGDFLLR---IED--TDQNRFVEGAEQYIKET 62

Query: 189 LYNNDSDLPE--------GYYPGVYLKHVGKELADKY---SSELLNFPEEKWLPIVKDYS 237
           L        E        G Y     K +  E  DK    ++    F   + L + +  +
Sbjct: 63  LEWCGIPYDEGPGKPGNCGPYKQSDRKEIYVEHVDKLIQSNNAYYAFDTPEDLEVKRKEA 122

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            Q   K          + + + +S ++      +                E  +   K+K
Sbjct: 123 EQDHTKFSYGPKNRNQLNNSLTLSAEELQTKLDNK---------------ENYVIRFKTK 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
           ++    +  +   F         D+ L KSDG  TY  A++       +     + +V+ 
Sbjct: 168 SSVTLSIHDEIRGFIEVDSEVLDDKVLFKSDGLPTYHLANI------VDDHLMRITHVIR 221

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +    +    ++  A   +  +   L    + L   G   K+SKR GD
Sbjct: 222 GEEWLPSLPLHISLYEAFGWETPKFAHL---PLILKPSGKG-KLSKRDGD 267


>gi|91776507|ref|YP_546263.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254071|sp|Q1GZB5|SYL_METFK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91710494|gb|ABE50422.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 817

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 24/65 (36%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +       S   +    +    K     +   P+G +H+GH R   +GD L+      
Sbjct: 10  IEQQAQQYWESNATFTATEVSDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHRMR 69

Query: 158 GYEVT 162
           GY V 
Sbjct: 70  GYNVM 74


>gi|220932174|ref|YP_002509082.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782501|sp|B8CXR8|SYL_HALOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219993484|gb|ACL70087.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 830

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KG+ N        +K        G+   +    K     +E     P+G +H+GH R   
Sbjct: 2   KGYYNF---ADIEKKWQDKWEKDGLYKTQEETDKDNYYVLEMF-PYPSGNLHMGHVRVYS 57

Query: 146 VGDTLASLMAFSGYEV 161
           +GD +A     +GY V
Sbjct: 58  IGDVIARFKRMNGYNV 73


>gi|260428209|ref|ZP_05782188.1| glutamyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422701|gb|EEX15952.1| glutamyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 476

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 13/125 (10%)

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   L  P    T   D  + +++ R+  +    D  LL+SDG+  Y    LA     ++
Sbjct: 144 YVIRLKTPTEGETVIEDEVQGRVVIRNDQLD---DMILLRSDGTPVYM---LAVVVDDHD 197

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G  ++I   G DH     R   +  A+        V +   + L       K+SKR G 
Sbjct: 198 MGVTHVIR--GDDHLNNAARQMGIYTAMGWD-----VPVWAHIPLIHGPDGKKLSKRHGA 250

Query: 407 FITLR 411
                
Sbjct: 251 LGVDE 255


>gi|254995080|ref|ZP_05277270.1| glutamyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
          Length = 466

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 87/300 (29%), Gaps = 56/300 (18%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I   + +PTG +H+G  R A+     A                   G Q        
Sbjct: 1   MRVITRFAPSPTGSLHLGGARTALFNWLFARR----------------HGGQF------- 37

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R +       S+          ++ +           ++     +    V        
Sbjct: 38  LLRMEDTDQERSSETVAQSI----IEDMAWLGLHHDQDVVIQSARRERHTQVA------- 86

Query: 242 MKIIRDDLKALNIQHDIFISEDDF------HRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                ++L A    +  + SEDD       H  +    R    +     +   G     +
Sbjct: 87  -----EELLARGKAYYCYCSEDDIAAEKLRHENEGKHYRHHCPS-RDANHAQSGTAGVLR 140

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            K+ +  ++     ++    V  +   D  +L+S+G  TY    LA     ++    ++I
Sbjct: 141 LKSPENREIKFTDGVYGEISVSSEQIDDMVILRSNGHPTYL---LAVVVDDHDMCITHII 197

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              GSDH     +   +A A+     Q   +    +     G  +    RA      R +
Sbjct: 198 R--GSDHITNTIKQMLLAEAMGWDNPQFCHI---PLIHDEGGAKLSKRNRAPGVHEYREL 252


>gi|209551495|ref|YP_002283412.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238064870|sp|B5ZV40|SYL_RHILW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209537251|gb|ACI57186.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNSDPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|241206933|ref|YP_002978029.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860823|gb|ACS58490.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNADPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|163789241|ref|ZP_02183683.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159875456|gb|EDP69518.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 307

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 96/289 (33%), Gaps = 40/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          GD +  +      +  +  Y+  A    + +  
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKHGGDFVLRI-----EDTDQNRYVEGAE---DYIVE 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W         D    +    G Y +   K L  +Y+ +L++            +   
Sbjct: 62  SLSW----CGIPFDEGPGKNEKFGPYRQSERKHLYKQYADQLISSG-----KAYYAFDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI--RDIIDNLARQGYVYEGILPPPKSK 297
             +   R   +A            +  R   S +            G  Y      P+ +
Sbjct: 113 EQLDAHRKGHEAEGKTFIYNWHNREKGRLVNSLVLTEAETQAKIEGGEHYVVRFKSPQDE 172

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    D+ R  +   + ++    D+ L KSDG  TY    LA     +     ++I   G
Sbjct: 173 TLLLKDIIRGDISIDTNVLD---DKILFKSDGMPTYH---LANIVDDHLMEITHVIR--G 224

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +    +   + +  A   +  +   L   L    +     K+SKR GD
Sbjct: 225 EEWLPSLALHQLLYDAFGWETPEFAHLPLILKPTGKG----KLSKRDGD 269


>gi|54307796|ref|YP_128816.1| isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400140|sp|Q6LUL1|SYI_PHOPR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46912219|emb|CAG19014.1| putative Isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 954

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 19/173 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A+  K     VL    V    DG   KMSK  G+ +  +
Sbjct: 569 LYLEGSDQHRGWFQSSLVSSVAMKGKAPYNQVLTHGFVV---DGQGRKMSKSVGNVVAPK 625

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     +  +     ++ ++S +        AY R R+  R     
Sbjct: 626 DVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD--------AYRRIRNTAR---FF 673

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHL-AEYPRVIENATIAQEPYKLAF 523
             +L+      +++  E         +   + A+    I  A      + +  
Sbjct: 674 LANLNGFNPETDLVAPEEMVALDRWAVGRAMEAQ--EEIIKAYDGYNLHGVTQ 724


>gi|148261042|ref|YP_001235169.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|189082979|sp|A5G068|SYL_ACICJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146402723|gb|ABQ31250.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 864

 Score = 43.8 bits (102), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +     +                 G+     +E     P+G +H+GH R   +GD +A
Sbjct: 13  FTAAEARWQAAWEARNCFATADAPQGGRRKCYVLEMF-PYPSGKIHMGHVRNYAIGDVIA 71

Query: 152 SLMAFSGYEV 161
                 GY+V
Sbjct: 72  RARRAQGYDV 81


>gi|328944631|gb|EGG38792.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 485

 Score = 43.8 bits (102), Expect = 0.081,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY  ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVKELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
                    + +    +   +I+E   + G     +   I      G +    L   ++ 
Sbjct: 108 TEEELAAERERQEAAGETPRYINE---YLGMSEEEKAAYIAEREAAGIIPTVRLAVNETG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  D+ + ++ F    +G   D  + K DG  TY   + A     +     ++I   G
Sbjct: 165 VYKWTDIVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEAIGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|313901175|ref|ZP_07834663.1| leucine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954133|gb|EFR35813.1| leucine--tRNA ligase [Clostridium sp. HGF2]
          Length = 799

 Score = 43.8 bits (102), Expect = 0.081,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 90/270 (33%), Gaps = 38/270 (14%)

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAM 241
           W + +    +   + EG   G   +    E     +S  L+   +++ +  +  +  +  
Sbjct: 347 WEFAKKFGIDIIPVLEG---GDVTQEAYTEDGVHINSGFLDGMGKQEAIDTMIAWLEEHA 403

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               +   K      D   S    + G+P PI  + D   R   + E  L  P++K  + 
Sbjct: 404 CGCAKTTYKL----RDWLFS-RQRYWGEPIPIIHMEDGTTRTVDIDELPLELPETKNFKP 458

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA----YFKCKYERGFDNMI---- 353
                  L      +  ++D    K +   T      A    Y+    +   D+ I    
Sbjct: 459 SGSGESPLAHCEDWLNVEIDGVKGKRE---TNTMPQWAGSCWYYLRYIDPKNDDAIAAEE 515

Query: 354 ----------YVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMP 397
                     YV G++H+     Y +    V         +     L  + + L  +   
Sbjct: 516 LLKHWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVPTKEPFQRLFHQGMILGEN--N 573

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            KMSK  G+ +    +V+  G+D++R   +
Sbjct: 574 EKMSKSRGNVVNPDDIVESHGADALRVYEM 603


>gi|257386747|ref|YP_003176520.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169054|gb|ACV46813.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 930

 Score = 43.8 bits (102), Expect = 0.081,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 30/183 (16%)

Query: 354 YVMGSDHSG-------YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           YV G +H+        +V +  +    +  ++   N++   +V+L  DG   KMSK  G+
Sbjct: 555 YVGGIEHAVMHLLYARFVTKAISDLELLDHREPFQNLVTQGMVQL--DGE--KMSKSKGN 610

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            ++ +++V+E G+D+ R  M+     E  DFD+     +S    +  + Y          
Sbjct: 611 VVSPQNIVEEYGADTARLFMMQAARPER-DFDWKDEGVESSHRFLTRL-YDAVEAHVGSP 668

Query: 467 QAKDIFPDLDF---DLFPRNVIPQES-------EFDTSELQLIVHLAEYPRVIENATIAQ 516
            A +     D+   ++     I  ES       E      +L+  L  Y         A 
Sbjct: 669 PAGEAGDVTDYVRHEIDRVTAIADESYEQLTFTEALRETRELLSLLDRY-------AEAT 721

Query: 517 EPY 519
           EP+
Sbjct: 722 EPH 724


>gi|321309634|ref|YP_004191963.1| valyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801478|emb|CBY92124.1| valyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 802

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 33/180 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH   A++ D L       G            G  ++   +S+  + +  L
Sbjct: 14  PNLTGILHLGHLWNALLQDFLIRHYKSQGIPTY-------WGYGMDHAGISLQVKVESEL 66

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                   EG   G   K                    K L   KD   +     IR   
Sbjct: 67  K------KEGLRKGDLTKEEFS----------------KRLWAWKDIHAER----IRSQY 100

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           + LN+   +            S + ++   L R G +Y            +    D + L
Sbjct: 101 RKLNLLLPLEEEHFTLSPESQSFVVEVFKKLYRDGLIYRDERLVNWDPLLRTAISDAEVL 160


>gi|323342324|ref|ZP_08082556.1| glutamate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463436|gb|EFY08630.1| glutamate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 481

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 100/302 (33%), Gaps = 51/302 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAG 171
            KV + + + +PTG +H+G+ R A+          GD +  +      ++ R        
Sbjct: 2   KKVRVRY-APSPTGFLHIGNARTALFDYLVAKHHGGDFVLRIEDT---DIER-------N 50

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            +    +   F  +   + +   D P+  Y   Y +    ++ ++Y  +LL   +     
Sbjct: 51  VEGGEESQLYFLNWLGIVPDESPDKPKPEY-APYRQMERLDIYNEYVEKLLASGDA---- 105

Query: 232 IVKDYSVQAMMKIIRDDLKA--LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
               Y      + + +D K            S    H  D +           +G  Y  
Sbjct: 106 ----YKCYCTTEELDEDYKRQVAAGHQSTRYSRTCLHLDDETK-----QRYETEGRPYSV 156

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERG 348
            L  P   T    DM R ++ F S  +GD     ++KS+G  TY FA  +     +    
Sbjct: 157 RLRVPTDATYTFNDMVRGEISFESKDIGDW---VIVKSNGIPTYNFAVVIDDHLMEISHV 213

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           F       G +H     +   +            + L   + L  +    K+SKR    +
Sbjct: 214 FR------GEEHISNTPKQMMLYEMFGWD-----IPLFGHMTLIVNENGKKLSKRDNSIM 262

Query: 409 TL 410
             
Sbjct: 263 QY 264


>gi|253577156|ref|ZP_04854476.1| glutamyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843400|gb|EES71428.1| glutamyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 486

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 101/298 (33%), Gaps = 42/298 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +V R    N AG + N L    +
Sbjct: 9   APSPTGHLHIGNARTALFNYLFARHHGGKFIIRIEDTDVKR----NVAGGEENQL---TY 61

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAM 241
            ++    ++   D+   Y  G Y +    +L      +LL+           ++   +  
Sbjct: 62  LKWLGMDWDESVDVGGNY--GPYRQTERLDLYRPLVQDLLDRGLAYRCYCTEEELEKERE 119

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            ++ R +    + +      E              +     +G  Y      P+ +T   
Sbjct: 120 EQMARGETPRYSGKCRHLTPEQ-------------LAAYDAEGRQYSIRFRVPEGRTFTF 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ +  + F S + GD     ++K DG  TY   + A     +     +++   G DH 
Sbjct: 167 DDLVKGPISFESDVSGDF---VIVKKDGIPTY---NFAVVLDDHLMNITHVLR--GEDHV 218

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
               R   +  A   +      +      L       K+SKR    I      D++G 
Sbjct: 219 SNTPRQLMIYDAFGWEPPVFGHM-----TLIVGENHKKLSKRDESVIQFIEQYDQLGY 271


>gi|115398550|ref|XP_001214864.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191747|gb|EAU33447.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 983

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 1/69 (1%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   +  K  +               K     +      P+G +H+GH R   + D LA 
Sbjct: 54  IDRKWQEKWHTDAAAKPSSVNGAAPDKQKSYILSMF-PYPSGTLHMGHLRVYTISDVLAR 112

Query: 153 LMAFSGYEV 161
                G++V
Sbjct: 113 FYRMRGHDV 121


>gi|332365181|gb|EGJ42944.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 485

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 99/294 (33%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHHGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E  F     +     I      G +    L   ++  
Sbjct: 108 TEEELAAERERQEAAGETPRYINE--FLGMSEAEKAAYIAEREAAGVIPTVRLAVNEAGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|329767862|ref|ZP_08259376.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328838650|gb|EGF88249.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 465

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 64/460 (13%), Positives = 138/460 (30%), Gaps = 80/460 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V D +   +  SGYEV       D   +I         +   
Sbjct: 28  CGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYEVDFISNFTDVDDKI--------IKASN 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               + S+L + Y    +  +          +  +    ++ +  +     +        
Sbjct: 80  EEGISTSELTDKYINAFFKDYDALGCKRATKNPRVTEYMQEIIKFIAKLVEEGFA----- 134

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +A    +     ++D+ +     I D+I                       K D    
Sbjct: 135 -YEADGDVYFRTRKKEDYGKLSKQSIDDLI-------------SGARIEVGEHKEDPLDF 180

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  +    +    + +A      +      I +            
Sbjct: 181 ALWKKAKPGEVKWDSPFGEGRPGWHIECSVMA------KETLGETIDIHAGGQDLTFPHH 234

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A  SE     +     +   + +   +KMSK  G+F  ++ ++ E+    +R  ML
Sbjct: 235 ENEIAQ-SECHNHASFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIAEIDPMVLRLFML 293

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  +++    + E +K N               F + K  + +L F L        
Sbjct: 294 TVHYRTPINYTLENI-ELAKTN---------------FEKIKTSYQNLQFRLNNEM---T 334

Query: 488 ESEFDTSELQLIV-HLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENP 543
           E + DT  + L+   L ++                  Y+ D    A+     +   R + 
Sbjct: 335 EEKLDTEVVTLVTEELDKFEE----------------YMQDDFNTANALSSWYEIVRISN 378

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                +  N++     L+L++A     +   +I+G+    
Sbjct: 379 SYTAKETVNKET----LELINAAFETYS---SILGINVKE 411


>gi|325479214|gb|EGC82311.1| glutamate--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 493

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 109/303 (35%), Gaps = 49/303 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  R  ++  A   +  L  
Sbjct: 9   APSPTGYLHIGGLRTALFNYLYARHTGGDMLLRI-----EDTDRTRFVEGA---LENLLK 60

Query: 180 SVFWR----YQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIV 233
           ++ W      +  + + + ++ +    G Y++    E  + DKY ++L+   +  +    
Sbjct: 61  ALKWSGIEIDEGVMLDENGEVTQKGDCGPYIQSERVEKGIYDKYINQLIEEGK-AYYCFC 119

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               +  +    R D   L  ++D              P+ +    +A  G  +   L  
Sbjct: 120 SQERIDKVRDQQRAD--GLTPKYDGLCR--------SIPLEEAKKRVAA-GEPHTVRLKL 168

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P ++     D  + ++ F +    D  D+ L+K DG  TY     A     +  G  ++ 
Sbjct: 169 PVNRDITFNDRIKGKITFNTD---DQDDQVLIKRDGFPTYHF---AVVVDDHLMGITHV- 221

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G +      +   +  A   +  +        +    +    K SKR GD + +   
Sbjct: 222 -VRGDEWVSSTPKHVYLYEAFGWEAPEYIH-----LPTVLNKDHKKYSKRNGDGM-VEDF 274

Query: 414 VDE 416
           ++E
Sbjct: 275 IEE 277


>gi|317495866|ref|ZP_07954229.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914043|gb|EFV35526.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
          Length = 465

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 64/462 (13%), Positives = 137/462 (29%), Gaps = 84/462 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V D +   +  SGYEV       D   +I         +   
Sbjct: 28  CGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYEVDFISNFTDVDDKI--------IKASN 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               + S+L + Y    +  +          +  +    ++ +  +     +        
Sbjct: 80  EEGISTSELTDKYIAAFFKDYDALGCKRATKNPRVTEYMQEIIDFIAKLIEEGFAYESNG 139

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDR 306
           D     +       E D+ +     I D+I       G   E  L     K  +  ++  
Sbjct: 140 D-----VYFRTRKKE-DYGKLSKQSIDDLISGARIEVGEHKEDPLDFALWKKAKPGEVK- 192

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
                 ++  G+          G   +    +       E   D  I +           
Sbjct: 193 -----WASPFGE----------GRPGWH---IECSVMAKETLGDT-IDIHAGGQDLTFPH 233

Query: 367 LE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
            E  +A +     A  +     +   + +   +KMSK  G+F  ++ ++ E+    +R  
Sbjct: 234 HENEIAQSECHNHAPFSNYW--MHNAFINIDNVKMSKSLGNFRLVKDIISEIDPMVLRLF 291

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
           ML       +++    + E +K N               F + K  + +L+F L     +
Sbjct: 292 MLTVHYRTPINYTLENI-ELAKTN---------------FEKLKTSYQNLEFRLNNEMTV 335

Query: 486 PQESEFDTSELQLI-VHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRE 541
               + D   + L    L ++                  Y+ D    A+     +   R 
Sbjct: 336 ---EKLDDEVVALASSELEKFEE----------------YMQDDFNTANALSSWYEVVRI 376

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                     N++     L+L+ A     +   +I+G+   +
Sbjct: 377 TNSYTAQNEVNKET----LELLKAAFDTYS---SILGINVKD 411


>gi|313673993|ref|YP_004052104.1| glutamyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940749|gb|ADR19941.1| glutamyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 486

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 101/281 (35%), Gaps = 33/281 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQ 187
           + +PTG +HVG+ R A+     A     +G  + R   I D   + +TL + ++ +   +
Sbjct: 8   APSPTGHIHVGNARTALFNYLFAK--KNNGVFILR---IEDTDLERSTLESENIIYEDLK 62

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  +  + P  G   G Y +     + ++Y  +L+    E +      +  +  ++  R
Sbjct: 63  WLGLDWDEGPIVGGDFGPYRQSERLHIYEEYVKKLM---AEGFAYEC--FCTKDELEAER 117

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +  KA   Q        +    +          L   G V   I    K K     D  +
Sbjct: 118 EKAKAEGRQPIYNGKCRNLSNEEK-------IRLKNSG-VKPSIRFHVKEKEVLVKDFIK 169

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +LF +   GD     +++ DG  TY   + A           ++I   G DH     +
Sbjct: 170 GDVLFPTDTFGDF---VIVRPDGIPTY---NFAVVIDDALMKITHVIR--GDDHLNNTPK 221

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              +  A++ K           + +       K+SKR GD 
Sbjct: 222 QILIFNALNFKLPIFVH-----IPMILGSDHSKLSKRHGDT 257


>gi|295101133|emb|CBK98678.1| glutamyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 489

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 100/295 (33%), Gaps = 52/295 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          G  +  +               D G  +     
Sbjct: 11  APSPTGYMHVGNLRTALYTYLMAKHDDGTFILRIEDT------------DQGRYVEGAVD 58

Query: 180 SVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            ++   R    L++   D+  G   G Y++     +  +Y+ +L+   +  +     +  
Sbjct: 59  VIYNTLRETGLLWDEGPDI--GGPVGPYVQSERMGMFKQYAEQLVAEGK-AYYCFCTEER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++A+    R               E   + G      R+ ++     G  Y      P+ 
Sbjct: 116 LEALHAEQRA------------HGEMTHYDGCCRDLPREEVEKRLAAGEPYVIRQKIPRE 163

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   DM    +   ++ +    D+ L+K+DG  TY   + A     +  G  ++I   
Sbjct: 164 GVTGFDDMVYGHIEVNNSEMD---DQILIKTDGMPTY---NFANVVDDHLMGITHVIR-- 215

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           GS++     +   +  A        N + C  V         K+SKR GD     
Sbjct: 216 GSEYLSSTPKYNLLYQAFGWNIP--NYIHCPPVM---KDAQNKLSKRNGDASYQD 265


>gi|294675814|ref|YP_003576429.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474634|gb|ADE84022.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 851

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 27/121 (22%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
           +K  ++   +G+   R    +     +E     P+G +H+GH R   +GD +A       
Sbjct: 11  QKWQAAWEAAGVFTARRDPARPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYKMSCG 69

Query: 153 --LMAFSGYEVTR---EY-------------YIN--DAGAQINTLALSVFWRYQQALYNN 192
             ++   G++      E              Y N  D  AQ+  L LS+ W  + A  + 
Sbjct: 70  FSVLHPMGWDAFGMPAENAAIERGGHPKDWTYSNIADMRAQMKPLGLSIDWSREFATCDP 129

Query: 193 D 193
           +
Sbjct: 130 E 130


>gi|270292555|ref|ZP_06198766.1| methionine--tRNA ligase [Streptococcus sp. M143]
 gi|270278534|gb|EFA24380.1| methionine--tRNA ligase [Streptococcus sp. M143]
          Length = 679

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 29  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 77  EAGITPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 129

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 130 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 183

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 184 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 243

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 244 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 303

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 304 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 352


>gi|226329632|ref|ZP_03805150.1| hypothetical protein PROPEN_03542 [Proteus penneri ATCC 35198]
 gi|225202818|gb|EEG85172.1| hypothetical protein PROPEN_03542 [Proteus penneri ATCC 35198]
          Length = 962

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 15  TYNPAEIEQPLYQHWEKNGYFKANGDTTKESFCIVIPPPNVTGSLHMGHAFQQTIMDTMI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 75  RYQRMQGKNTLWQSGTDHAGIATQMV-------------------------------VER 103

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I + ++ L    D          G   
Sbjct: 104 KIAAEEGKTRHDYGRDAFIDKIWEWKAESG-GNISNQMRRLGNSVDWERERFTMDEGLSK 162

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G               D +
Sbjct: 163 AVKEAFVRLHKEDLIYRGKRLVNWDPKLHTAISDLE 198


>gi|289581377|ref|YP_003479843.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530930|gb|ADD05281.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 904

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 15/140 (10%)

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI---YVMGSDH-------S 361
            +T   D +D  +  S     Y + DL        R  D M    YV G +H       S
Sbjct: 494 DATRETDTMDTFVDSSWYFLRYVSPDLEEAPFDLARANDWMPVDQYVGGIEHAVMHLLYS 553

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +  ++ A    +  ++   N+L   +V+L  DG   KMSK  G+ ++ + +V+E G+D+
Sbjct: 554 RFFTKVLADHEGLEHREPFTNLLAQGMVQL--DGE--KMSKSKGNTVSPQRIVEEYGADT 609

Query: 422 VRFMMLWRKNSELLDFDFCK 441
            R  M+     E  DFD+ +
Sbjct: 610 ARLFMMQAAQPER-DFDWSE 628


>gi|91205126|ref|YP_537481.1| leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990937|sp|Q1RJS2|SYL_RICBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91068670|gb|ABE04392.1| Leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 831

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 5   QKWQQIWQEEKAFEVPNESSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVVARFMTMQG 63

Query: 159 YEV 161
           + V
Sbjct: 64  FNV 66


>gi|91772253|ref|YP_564945.1| isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684526|sp|Q12ZD1|SYI_METBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91711268|gb|ABE51195.1| Isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 1058

 Score = 43.8 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 357 GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D   G+   +L A   A   K    NVL+        DG   KMSK  G+ I    V+
Sbjct: 556 GHDQTRGWFYSQLGASMVAFG-KAPYKNVLMHGF---TLDGSGKKMSKSIGNVIQPAEVI 611

Query: 415 DEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPV 451
           D+ G+D++R  +L      E L F++ ++    + N +
Sbjct: 612 DKFGADTLRSYVLSASAPWEDLKFNWDELATVHRTNNI 649


>gi|303255799|ref|ZP_07341840.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260254|ref|ZP_07346225.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303264128|ref|ZP_07350049.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|302597183|gb|EFL64288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302638578|gb|EFL69042.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302646533|gb|EFL76759.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 665

 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|298483043|ref|ZP_07001224.1| glutamate--tRNA ligase [Bacteroides sp. D22]
 gi|298270787|gb|EFI12367.1| glutamate--tRNA ligase [Bacteroides sp. D22]
          Length = 505

 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 98/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGECGPYRQSERREIYKKYVQVLLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +  G  ++I   
Sbjct: 168 DVHVNDLIRGEVIINSSILD---DKVLYKSADELPTYH---LANIVDDHLMGVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|297623875|ref|YP_003705309.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165055|gb|ADI14766.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 486

 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 115/392 (29%), Gaps = 44/392 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R  ++ D L   + + G  V     I D G     L         +
Sbjct: 32  CGPTVYSEPHLGHARGPILFDVLRRYLEYLGLRVRLVTNITDVG----HLTDDADDGEDK 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-QAMMKIIR 246
            L     +  E             +   K      +        I +  ++ Q +++   
Sbjct: 88  LLKRAKLEQLEPMEIADKYFWAYFDAMAKLGVRRPDITPRATGHITEQIAMTQTLLERGL 147

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              +  N+  D+   E  +       + D+++                 +  + K D   
Sbjct: 148 AYERGGNVYFDVSAWE-TYGELSGRNVDDLVEG-------------TRIATRSDKDDPRD 193

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L  R+   G  +  P    +G   +               FD    + G         
Sbjct: 194 FALWKRAEG-GHLMRWPSPWGEGYPGWHIECSVMSTKYLGDAFD----IHGGGLDLIFPH 248

Query: 367 LE---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            E   A A A  +  A++ +    +V L       KM+K  G F+TL  +       +VR
Sbjct: 249 HECELAQAKAAGKPFARVWLHF-NMVTL----EGEKMAKSKGHFVTLEELFRRFDPIAVR 303

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           F +L      + DF    ++  ++        YA         +A +   D D D  P  
Sbjct: 304 FHLLGTHYRSVSDFSEASLRASAQGLRRLREGYAA------LARAVEDGGDEDADPSPYR 357

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
              + +  D   L     LA    V+ +A   
Sbjct: 358 ERFEAAMNDD--LNTAQALA----VLYDALRE 383


>gi|311743047|ref|ZP_07716855.1| valyl-tRNA synthetase [Aeromicrobium marinum DSM 15272]
 gi|311313727|gb|EFQ83636.1| valyl-tRNA synthetase [Aeromicrobium marinum DSM 15272]
          Length = 860

 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 65/222 (29%), Gaps = 41/222 (18%)

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R  A    V      ++           D    KMSK  G+ +    ++   G+D+VR
Sbjct: 554 VVRSHAEFGGVPWTHTALS-------GFVVDPDRKKMSKSKGNVVVPDEILRTYGADAVR 606

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +     +      FD  ++K   +               S F  A +    L   +   +
Sbjct: 607 WRAAGARPGADSPFDEAQMKVGRR-------LAMKVLNASKFVLAAEDAYGLGAGVADLD 659

Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY----LYDLASVFHGHWSHG 539
                   D +       L     V++ AT   E      Y      ++   F   W   
Sbjct: 660 PAAVTVPLDRA------MLTRLSGVVDAATAHFE-----DYDYASALEVTEKF--FWDFC 706

Query: 540 RENPRLRFVQA--NNRKLTMMR--LQLVHAVASIINSGLNII 577
            +   L   +A  ++ +    R    L  AV       L ++
Sbjct: 707 DDYLELVKERARRDDAEGASARSAFALALAVQ------LRLL 742


>gi|190893972|ref|YP_001980514.1| leucyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692504|sp|B3PS46|SYL_RHIE6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190699251|gb|ACE93336.1| leucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNADPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 479

 Score = 43.8 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 114/335 (34%), Gaps = 62/335 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                 GP H+GH R  VV D +A  +  +GY+VT   Y+         +   +  R  +
Sbjct: 29  CGPTVYGPCHIGHARSVVVFDVIARYLRVAGYDVT---YV----RNFTDVDDKIIHRAAE 81

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                   + E Y            +A+ Y      F +   +       +  ++ +I  
Sbjct: 82  E-GKTSEQIAEKY------------IAEFYRDMDALFVQRATVEPKATEHIDDILAVI-Q 127

Query: 248 DLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            L    + +    D+F S               ++     G +    L   ++    + D
Sbjct: 128 ILVNKGVAYEAGGDVFFS---------------VEAFPGYGKLSGRKLDQMEAGARIEVD 172

Query: 304 MDRKQ----LLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             ++     +L+++   G+   + P  +  G   +     A       + FD  I+  G 
Sbjct: 173 KRKRNPFDFVLWKAEKPGEPSWESPWGR--GRPGWHIECTAMSSRYLGQTFD--IHGGGK 228

Query: 359 D-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           D     H   + + EA   A   + A+  V     V++ ++    KMSK   +F  +  +
Sbjct: 229 DLIFPHHENEIAQSEA---AFGREFARFWV-HNGFVQINQE----KMSKSLNNFKMINEI 280

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           ++    ++VR  +L       +DF    + E    
Sbjct: 281 LEAYHPETVRLFLLSSHYRSPIDFSDTSMAEAGAG 315


>gi|319789482|ref|YP_004151115.1| glutamyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317113984|gb|ADU96474.1| glutamyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 484

 Score = 43.8 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 96/298 (32%), Gaps = 57/298 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MHVG+ R A+     A       ++     +  R      +   +  +  ++ 
Sbjct: 8   APSPTGFMHVGNARTALFNYLFARHNNGTFILRIEDTDTER-----HSEEAVKVIYEALK 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D   P G Y      ++ KE  +K                +K+  +    
Sbjct: 63  WMGLDWDEGPDRGGPYGPYRQSERLNIYKEFIEK----------------LKEKGLVYEC 106

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPI--------RDIIDNLARQGYVYEGILPPP 294
              +++L+ +  +           RG+P               + L  +G         P
Sbjct: 107 YCTQEELEQMRKE--------QLERGEPPRYTGKCRHLTEAEKEKLRAEGRKPVLRFKVP 158

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354
           + +  +  D+ + ++   S  +G D    +++S+G   Y       F    +     + +
Sbjct: 159 EDRVVKFKDLVKGEIEINSRQLGGDF--VIVRSNGMPVYN------FVVVVDDALMKITH 210

Query: 355 VM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           V+ G DH     +   +  A+  +  Q        + +       K+SKR G      
Sbjct: 211 VIRGEDHISNTPKQLLLYEALGFEAPQFAH-----LPMILGSDRSKLSKRHGSTSVKE 263


>gi|260187457|ref|ZP_05764931.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 460 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 509

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 510 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 567

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 568 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 611

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L +    +++A    E  +    LY  A   F   +        
Sbjct: 612 PSPNELTDADRWILGRLEDVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 663

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 664 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 689



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPAAMESAIYQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  + +  + 
Sbjct: 77  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEQQLAVD- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDLGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   Q    D +
Sbjct: 164 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLE 197


>gi|156542618|ref|XP_001604554.1| PREDICTED: similar to glutamyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 544

 Score = 43.8 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 99/300 (33%), Gaps = 50/300 (16%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
            K +   + F + +PTG +H+G  R A+     A       ++     + TR        
Sbjct: 16  YKKSHCRVRF-APSPTGYLHLGGLRTALYNYLFARSQNGTFILRIEDTDQTRVVP----- 69

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEK 228
             +  L   + W       +   + P G Y       + KE         S    F  E+
Sbjct: 70  GAMEQLHDDLIWAGIIPDEDPIREGPFGPYIQSRRIDIYKEQVKLLLNNGSAYKCFCSER 129

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
            L I++  +V+      R   K  N    +   E          ++D +    +    ++
Sbjct: 130 RLEILRKAAVKE-----RQTPKYDNRCRHLTDQE----------VKDKLKRGEQYCIRFK 174

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
               P   K     D+    +++ +   GD     +LKSDG  TY  A++       +  
Sbjct: 175 LTPTPEPFK-----DLIYGDIIYDAQNEGDP---VILKSDGFPTYHFANV------VDDH 220

Query: 349 FDNMIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           F  + +V+ G +      +   +  A      Q        + L  +    K+SKR  D 
Sbjct: 221 FMEITHVLRGVEWQISTPKHLLLYKAFGWSPPQ-----YAHLPLIMNSDNTKLSKRQNDI 275


>gi|73958739|ref|XP_536934.2| PREDICTED: similar to CG4573-PA [Canis familiaris]
          Length = 523

 Score = 43.8 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 110/357 (30%), Gaps = 61/357 (17%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G          G  V + F + +PTG +H+G  R A+     A      G  + R   + 
Sbjct: 23  GRRAASVGADAGPAVRVRF-APSPTGFLHLGGLRTALYNYIFAK--KHQGSFILR---LE 76

Query: 169 DAGAQINTL---ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-- 223
           D   Q   +   A ++    + A    D     G   G Y +    EL  + +  LL   
Sbjct: 77  DT-DQTRLVPGAAENIEAMLEWAGIPPDESPRRGGPVGPYQQSQRLELYAQATKALLESG 135

Query: 224 -----FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F   + L ++K  +++       D                  +R      + +  
Sbjct: 136 AAYPCFCSPQRLDLLKKEALRNRQTPRYD------------------NRCRNLTQKQVAQ 177

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            LA+            + +       D      R  +   + D  +LKSDG  TY    L
Sbjct: 178 KLAKD----PKPAIRFRLEGEAPAFQDLVYGWNRHEVASVEGDPVILKSDGFPTYH---L 230

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           A     +  G  +++   GS+      +   +  A+  +  +        + L  +    
Sbjct: 231 ACVVDDHHMGISHVLR--GSEWLVSTSKHLLLYQALGWQPPRFAH-----LPLLLNKDGS 283

Query: 399 KMSKRAGDFITLR------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           K+SKR GD    +             ++   GS      M       +  FD  ++ 
Sbjct: 284 KLSKRQGDIFLEQFAAADFLPDALLDIITNCGSGFAENQMGRTLPELITQFDLTRIT 340


>gi|325697372|gb|EGD39258.1| glutamate--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 485

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DIYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E      +       I      G +    L   +   
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREAAGIIPTVRLAVNEVGV 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|323454405|gb|EGB10275.1| hypothetical protein AURANDRAFT_22805 [Aureococcus anophagefferens]
          Length = 955

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +      V   +     +    +  +  L RD    KMSK  G+ +    VVDE G+D+
Sbjct: 549 LFFWVARMVMLGLEF-TGESPFEVIYMHGLVRDKNNEKMSKTKGNVVDPLDVVDEFGADA 607

Query: 422 VRFMMLW-RKNSELLDFDFCKVKEQSK 447
           +RF ++      + +     KVKE   
Sbjct: 608 LRFSLVTGVTPGQDVPLSMDKVKENRN 634



 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 51/211 (24%), Gaps = 46/211 (21%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
                G+    +               N TG +H+GH     + D LA      G     
Sbjct: 72  WWEAQGLFEPSDAEHPRGAYTCPMPPPNVTGRLHLGHAMFVALQDILARFHRARGR---- 127

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
                                            P  + PG     +  +L  + +     
Sbjct: 128 ---------------------------------PTLWLPGTDHAGIATQLLVERALASEG 154

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDD-------LKALNIQHDIFISEDDFHRGDPSPIRDI 276
            P      + +D  ++ + +   ++       ++ L    D    +          + + 
Sbjct: 155 SPTRA--ELGRDKFLERVWRWKDENGGAITSQMRRLGASADWSREKFTLDDDMSRAVTEA 212

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              L  +G VY G      S        D +
Sbjct: 213 FVRLHEKGLVYRGSRMVNWSPNLGTAVSDLE 243


>gi|269216160|ref|ZP_06160014.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130419|gb|EEZ61497.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 859

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  +S   SG        G+  K  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 12  RWQASWEASGAHKAAEGDGRPKKYVLEMF-PYPSGDIHMGHVRNYTIGDVIARYSRMQGF 70

Query: 160 EV 161
           +V
Sbjct: 71  DV 72


>gi|261328970|emb|CBH11948.1| valyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 975

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 50/202 (24%), Gaps = 35/202 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNL---IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           Y+              SG     +      +G    I     N TG +H+GH     V D
Sbjct: 12  YIPKDVESGWYEWWEESGFFRPASDMGRPIRGRSFVIVSPPPNVTGHLHIGHALTGAVQD 71

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G +       + AG     +                               
Sbjct: 72  ALIRFHRMKGDDTLYLPGTDHAGIATQVV------------------------------- 100

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V K L  +      +   E++L  V  +  +    +I   L+ + +  D           
Sbjct: 101 VEKRLMKESGKSRHDVGREEFLKQVWAFK-ENHCGVITRQLRRIGLSLDWSRERFTMDEQ 159

Query: 269 DPSPIRDIIDNLARQGYVYEGI 290
               + +    L   G +Y   
Sbjct: 160 CAKAVVEGFVKLHEDGLIYRAT 181


>gi|289579168|ref|YP_003477795.1| glutamyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528881|gb|ADD03233.1| glutamyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 486

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 98/290 (33%), Gaps = 49/290 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     +       ++     ++ R             +   + 
Sbjct: 9   APSPTGAIHIGNIRTALFNYLFSKSEGATFVLRIEDTDLERSS-----KDFEELIFKELE 63

Query: 183 WRYQQALYNNDSDLPEGYYP-----GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
           W   +     D   P G Y       +Y K V K + +K +      PEE  L   +  +
Sbjct: 64  WLGIEWDEGPDKPGPYGPYRQSERLAIYHKFVQKLIEEKKAYRCYCTPEE--LEEDRKKA 121

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           V+      R D+   + +      E +          +      R+  +       P  +
Sbjct: 122 VE------RGDIPRYSGRCRYLTKEQE----------EAFIKEGRKPVIR---FIVPDDE 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  DM + ++  +S  +G D+   ++KSDG  TY   + A           ++I   G
Sbjct: 163 VIEFEDMIKGKITIKSDTLGGDM--VIVKSDGMPTY---NFAVVIDDALMKITHVIR--G 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            DH     +   +  A+  +             L       K+SKR G+ 
Sbjct: 216 EDHIYNTPKQILIYKALGFEIPTFAH-----APLILGPDRTKLSKRHGNT 260


>gi|189465396|ref|ZP_03014181.1| hypothetical protein BACINT_01745 [Bacteroides intestinalis DSM
           17393]
 gi|189437670|gb|EDV06655.1| hypothetical protein BACINT_01745 [Bacteroides intestinalis DSM
           17393]
          Length = 508

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 95/279 (34%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 14  APSPTGALHIGGVRTALYNYLFARQH---GGDMIFRIEDTDSNRFVPGAEEYILESFKWL 70

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL+  +  ++       ++A    I   
Sbjct: 71  GIPFDEGVSFGGEHGPYRQSERREIYKKYVKVLLDAGK-AYIAFDTPEELEAKRAEI--- 126

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L  +G  Y        ++     D+ R +
Sbjct: 127 -----ANFQYDASTRMQMRNSLTLSKEEVDALIAEGKQYVVRFKIEPNEDVHVNDLIRGE 181

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 182 VIINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 233

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +    +     L+         K+SKR GD
Sbjct: 234 VLLYRAFGWEDTMPSFAHLPLLLKPEG--NGKLSKRDGD 270


>gi|170758230|ref|YP_001786485.1| glutamyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688533|sp|B1KYV1|SYE_CLOBM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|169405219|gb|ACA53630.1| glutamate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 485

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +Y+ +L+   E             
Sbjct: 59  IYNTLKITGLSHDEGP-DIGGPVGPYVQSERRNIYIEYAEKLIEKGEA------------ 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ L  L    +       + +      ++ ID    +G  Y      P + +T
Sbjct: 106 YYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIDKKIAEGVPYVIRQKNPTTGST 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 166 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 218 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 266


>gi|119897351|ref|YP_932564.1| cysteinyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119669764|emb|CAL93677.1| CysS protein [Azoarcus sp. BH72]
          Length = 460

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 124/400 (31%), Gaps = 56/400 (14%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           IE G+  +        ++         H+GH R  VV D +A  +  SG++VT   Y+  
Sbjct: 18  IEPGKVRMYVCGMTVYDYC--------HLGHARVMVVFDMVARWLRASGFDVT---YV-- 64

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
               I  +   +  R Q+   +            +  + +     D  +  +L    E  
Sbjct: 65  --RNITDIDDKIIRRAQENGES---------IRALTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                      + ++    L  +   HD+  +   F  G        +D L        G
Sbjct: 114 ATDYVASMQSLIERLHAKGLAYVAANHDVCYAVRKF-EGYGKLSGKSLDELRA------G 166

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD---GSYTYFAADLAYFKCKYE 346
                  +     D      +       ++ D     S    G   +     A       
Sbjct: 167 ERVEVAGEKKDPLDF-----VLWKHAKAEEPDEAKWASPWGSGRPGWHIECSAMSSDLLG 221

Query: 347 RGFDNMIYVMGSDHSGYVKRLE-AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             FD    + G          E  +A +      A +N  +        D    KMSK  
Sbjct: 222 EHFD----IHGGGQDLQFPHHENEIAQSEGAHGHAFVNYWMHNGFVRVDD---EKMSKSL 274

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+F T+R V++   ++ VRF +L       L++    + +  +     Y        RS+
Sbjct: 275 GNFFTIRDVLETYDAEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLY-----TALRSV 329

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLA 503
              A     D       R     + +F+T+E L ++  LA
Sbjct: 330 E--AAPAAVDWTESHALRFRAAMDDDFNTAEALAVLFELA 367


>gi|330718899|ref|ZP_08313499.1| valyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 873

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 66/213 (30%), Gaps = 33/213 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           +    +I     N TG +H+GH     + D +       G++             ++   
Sbjct: 19  EPEPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTL-------WVPGMDHAG 71

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           ++   + +Q L  +          GV    +G+E   K+  ++  + +E           
Sbjct: 72  IATQAKVEQRLRQD----------GVTRYDLGRE---KFVEQVWQWKDE----------- 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                +I+     + +  D          G    +  +  +L ++G +Y G         
Sbjct: 108 --YAAVIKQQWGKMGLSLDFERERFTLDDGLNKAVNKVFVDLYKKGLIYRGEYIINWDPQ 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +    D + +          V  P +  + +Y
Sbjct: 166 ARTALSDIEVIYHDDEGAFYHVKYPFVNPNDTY 198



 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 74/204 (36%), Gaps = 24/204 (11%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            Q  +Y G   P      +  D D     F S +          K+DG +  +     Y 
Sbjct: 416 DQEEIYVGQEAPEGEGWER--DEDVLDTWFSSALWPFSTMGWPEKTDGDFARY-----YP 468

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                 G+D +I+         V R+       + ++   NVL+  L+   RDG   KMS
Sbjct: 469 TNTLVTGYD-IIFFW-------VARMMFQGKEFTGERPFKNVLIHGLI---RDGEGRKMS 517

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           K  G+ +    V+++ G+D++R+ +       +   F + K+         F  +   A 
Sbjct: 518 KSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDTRFTYEKMDASWN----FINKIWNAS 573

Query: 461 CRSIFRQAKDIFPDL-DFDLFPRN 483
              I   A+D    L DFD     
Sbjct: 574 RYVIMNLAEDTPTKLPDFDKLTLA 597


>gi|329573413|gb|EGG55023.1| valine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 829

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 51/172 (29%), Gaps = 33/172 (19%)

Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
           G +H+GH     + D +       G++             ++   ++   + ++ L    
Sbjct: 1   GKLHLGHAWDTTLQDMIIRQKRMQGFDTL-------WLPGMDHAGIATQAKVEEKLAQ-- 51

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                    G+    +G+E   K+  ++  + EE                 IR+    + 
Sbjct: 52  --------QGISRYDLGRE---KFVDQVWEWKEE-------------YASHIREQWAKMG 87

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  D          G    +R +  +L  +  +Y G          +    D
Sbjct: 88  LSLDYSRERFTLDEGLSEAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSD 139


>gi|284047281|ref|YP_003397621.1| isoleucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283951502|gb|ADB54246.1| isoleucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 1049

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSK 447
           + L  DG   KMSK  G+ +    V+D  G+D++R +    ++  +   F    + E  +
Sbjct: 593 LGLILDGEGQKMSKSRGNVVVPDEVLDRFGADALRWYFFTSKQPWDGYRFSHETIGEMVR 652

Query: 448 E-------NPVFYVQYAYA 459
           +          FYV YA A
Sbjct: 653 QFLLQLWNTYGFYVMYANA 671


>gi|226325481|ref|ZP_03800999.1| hypothetical protein COPCOM_03286 [Coprococcus comes ATCC 27758]
 gi|225206224|gb|EEG88578.1| hypothetical protein COPCOM_03286 [Coprococcus comes ATCC 27758]
          Length = 182

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 48/192 (25%), Gaps = 33/192 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +   L         +   +              N TG +H+GH     + D L 
Sbjct: 8   TYNPKEIEAKLYEKWCEEKYFHAEVDRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILI 67

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  A+S   +    L     D  E    G   +    
Sbjct: 68  RYKRMQGYNAL-------WIPGTDHAAISTEVKVTNQLKAEGIDKKELGREGFLKRT--W 118

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  ++Y+                          I   LK L +  D          G  +
Sbjct: 119 QWKEEYA------------------------GTIEGQLKKLGVSCDWDRERFTMDEGCSN 154

Query: 272 PIRDIIDNLARQ 283
            ++++   L  +
Sbjct: 155 AVKEVFLRLHEK 166


>gi|49475612|ref|YP_033653.1| methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|49238419|emb|CAF27646.1| Methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 519

 Score = 43.8 bits (102), Expect = 0.085,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 102/326 (31%), Gaps = 37/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA      G  V      ++ G ++   A+++    +Q    
Sbjct: 14  PNGAPHIGHAYSAIASDVLARFQRLDGKNVFFLSGTDEHGLKMQQTAVALGITPKQLTDR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           N +   +           +++   K                  + + +     ++ +   
Sbjct: 74  NSAVFQKMLAALNCSNNDFIRTTEKRHYQACQEIWKKMKANGDIYLSRYTGWYSVRQEAY 133

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
            + K   +  D             +  E+ +        + ++++  +            
Sbjct: 134 YEEKDTEVGEDNIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEKHPDFIAPPERRN 193

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF-KCKYERG 348
            +        +   + R    +   +  D      +  D    Y +A + +F +   +R 
Sbjct: 194 EVISFIKSGLKDISISRASFNWGICVPNDSKHVMYVWVDALTNYLSA-IGFFDENSKKRA 252

Query: 349 F-DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           F    ++++G D    H+ Y     A   +      +       L+        +KMSK 
Sbjct: 253 FWPASVHIIGKDIIRFHAIY---WPAFLMSAGIALPKRIFAHGFLLN-----NGVKMSKS 304

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ +    ++D  G D VR+ +L  
Sbjct: 305 IGNVVDPFEMIDHYGLDQVRYFLLRE 330


>gi|303261460|ref|ZP_07347408.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303266261|ref|ZP_07352152.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268700|ref|ZP_07354490.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301801632|emb|CBW34330.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302637594|gb|EFL68081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302641760|gb|EFL72117.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644191|gb|EFL74447.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
          Length = 665

 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|227820993|ref|YP_002824963.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227339992|gb|ACP24210.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 973

 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 46/303 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL   + +       +  +  F              D+      S  ++T+   D 
Sbjct: 535 VNARILEAFEEEGADAWFAEGAKERFLGNDHDHARWHQVMDILDVWFDSGSTHTFTLED- 593

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       + A   +     V+         D   
Sbjct: 594 -----RPDLKWPADVYLEGSDQHRGWFHSSLLESCATRGRAPYDAVVTHGFTM---DEKG 645

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY- 456
            KMSK  G+ +T + V+ + G+D +R  ++               ++Q     +      
Sbjct: 646 EKMSKSKGNTVTPQEVMKDAGADILRLWVMTT----------DYWEDQRLGKTIIQTNID 695

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIA 515
           AY + R+  R           +      +P+         QL++H LAE  R++     A
Sbjct: 696 AYRKLRNTIRWMLGTLAHDKGETIALADMPELE-------QLMLHRLAELDRLVREGYDA 748

Query: 516 QEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            +  ++A  L D ++      +   R++     +  +       R  L      +I +  
Sbjct: 749 FDFKRIARALIDFSNVELSAFYFDIRKD----ALYCDAPSSLRRRAAL-----QVIRTLF 799

Query: 575 NII 577
           + +
Sbjct: 800 DCL 802


>gi|294655823|ref|XP_458016.2| DEHA2C07722p [Debaryomyces hansenii CBS767]
 gi|199430633|emb|CAG86076.2| DEHA2C07722p [Debaryomyces hansenii]
          Length = 1084

 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 48/194 (24%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+        +          I       I     N TG +H+GH     + DTL     
Sbjct: 138 SWYSWWDKQGLFQPELTDSGEIKPQGAFTIPAPPPNVTGALHIGHALTIAIQDTLIRYYR 197

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W  ++   ++        Y          E  +
Sbjct: 198 MKGKTTLFLPGFDHAGIATQSVVEKQIWANEKKTRHD--------YGREKFIEKVWEWKE 249

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y                           I++ +K L   +D        +      + +
Sbjct: 250 EYHGR------------------------IKNQVKKLGASYDWSREAFTLNPDLSESVTE 285

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 286 AFVRLHEDGTIYRA 299


>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229558710|sp|B4U9I4|SYC_HYDS0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 488

 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 72/445 (16%), Positives = 131/445 (29%), Gaps = 68/445 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           HVGH R  +V D     +   GY V       D   +I                 +   +
Sbjct: 38  HVGHGRSLIVFDVFRRYLEKLGYRVKFVRNFTDIDDKI--------INKANEENKDFMSI 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              Y    YL      +        +    E+         + +++  + +  KA     
Sbjct: 90  ANRYIARYYLDMEAINVKPANVEPRVTEHMEE---------IISLISKLIELGKAYESDG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           DI+ S D F   D   +          G         P  K     D     L   S   
Sbjct: 141 DIYFSIDSF--KDYGKLSKRSPEELEAG-----ARIEPSLKKRNPLDF---ALWKASKSH 190

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAA 373
               + P   S G   +    +A          D     I ++   H   + + E++   
Sbjct: 191 EPGWESPW--SYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFPHHENEIAQAESI--- 245

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
               K      +   +         KMSK  G+F+TL+ +  +   D +R ++L+     
Sbjct: 246 --TGKPFARYWMHNGLVTVGGK---KMSKSLGNFVTLKEIYTKYHPDVLRLLVLFTHYRS 300

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
            LDF F K++E  K      ++ A      +   AK+  P +D D +      QE  +  
Sbjct: 301 PLDFSFEKMEETKK--AYERLKSAIEDIEPLKAIAKEGKPVVDIDFYSLEKSTQEQFY-- 356

Query: 494 SELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
                   L+E +   +                  +A +F+      +       +    
Sbjct: 357 ------KALSEDFNTSLA-----------------IAHIFNAVAELNKAKTESFKIGYIT 393

Query: 553 RKLTMMRLQLVHAVASIINSGLNII 577
            K     L L +++   +     ++
Sbjct: 394 PKELEGYLFLANSLKQTLKDIFGLL 418


>gi|119899504|ref|YP_934717.1| leucyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166230607|sp|A1KAH5|SYL_AZOSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119671917|emb|CAL95831.1| unnamed protein product [Azoarcus sp. BH72]
          Length = 873

 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +         S   +         K     +   P+G +H+GH R   +GD LA   
Sbjct: 7   PAAVETAAQQHWESTAAFRVTEDATRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFH 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMRGYNV 73


>gi|89891688|ref|ZP_01203191.1| valyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89516023|gb|EAS18687.1| valyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 877

 Score = 43.8 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 59/216 (27%), Gaps = 39/216 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +   + +  + +      ++ +++  +     I     N TG +H+GH     + D L 
Sbjct: 11  TIEDKWYQYWMEN------DFFKSVPDERESYTIVIPPPNVTGVLHMGHMLNNTIQDVLI 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   +  + L     D  +             
Sbjct: 65  RRARLKGYNAC-------WVPGTDHASIATEAKVVKKLKEQGID--KNDLSREEFLSHAW 115

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +  D+Y                          II + LK L    D   ++        +
Sbjct: 116 DWTDEYG------------------------GIILEQLKKLGASCDWSRTKFTLDDDMSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +  +L  +  +Y G          Q    D +
Sbjct: 152 SVIKVFVDLYNKDMIYRGFRMVNWDPEAQTTLSDEE 187


>gi|321252035|ref|XP_003192264.1| valine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458732|gb|ADV20477.1| Valine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1109

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 43/195 (22%), Gaps = 36/195 (18%)

Query: 99  RKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                     G    R              I F   N TG +H+GH     + D L    
Sbjct: 141 AAHYDWWNAKGFFKPRYGADGKPLDKGTFCITFPPPNVTGNLHIGHALTVSLQDALIRWK 200

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G       Y+            +V  +       +       YY          E  
Sbjct: 201 RMQG---QTVLYL-PGYDHAGIATQAVVEQRLMKTEGHSR----HYYGREKFLEKVWEWK 252

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D+Y  ++ N                         +  L    D             + +R
Sbjct: 253 DQYQGKITNQ------------------------MTRLGGSFDWDKVAFTMDDNLSTAVR 288

Query: 275 DIIDNLARQGYVYEG 289
           +    +  +G +Y  
Sbjct: 289 EAFVQMHEKGLLYRA 303


>gi|313157288|gb|EFR56713.1| isoleucine--tRNA ligase [Alistipes sp. HGB5]
          Length = 1133

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A+ + +  A  N++   LV    D    KMSKR G+ +    V+ 
Sbjct: 639 GVDQTRGWFFTLHAIASMLFDSVAFKNIISNGLV---LDKNGNKMSKRLGNGVDPFEVLA 695

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             G+D+ R+ M+      + L FD   V E  ++          F+  YA
Sbjct: 696 TYGADATRWYMISNSQPWDNLKFDRDGVDEVRRKFFGTLYNTYSFFALYA 745


>gi|240851273|ref|YP_002972676.1| leucyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240268396|gb|ACS51984.1| leucyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 87  GFINL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144
           G+ N+    +P    K    I      +         K  +  +   P+G +H+GH R  
Sbjct: 4   GYYNIGERYNPRAREKKWQEIWDEKKIFQTVQEDAREKYYVLEMFPYPSGRIHMGHVRNY 63

Query: 145 VVGDTLASLMAFSGYEV 161
            +GD +A      G+ V
Sbjct: 64  AMGDVVARYKRAKGFNV 80


>gi|237736668|ref|ZP_04567149.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420530|gb|EEO35577.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 84/226 (37%), Gaps = 23/226 (10%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G+D   +      +   +  +  +I         + RD +  KMSK  G+     +++
Sbjct: 486 VTGAD-IIFFWVARMIMFGL-YEMKEIPFKNVFFHGIVRDELGRKMSKSLGNSPDPLNLI 543

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +E G+D++RF ML+  +     +   K+ E  +         A     ++          
Sbjct: 544 EEYGADAIRFSMLYNTSQGQDVYFSEKLLEMGRNFANKIWNVARFVIMNLE---GFDVKS 600

Query: 475 LDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASV 531
           ++ D     ++ +   S  + +  ++   L ++  ++++A  A         +Y+ L   
Sbjct: 601 VNKDELKFELVDEWIFSRLNETTKEVHDCLDKF--LLDDAAKA---------VYEFLRGD 649

Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           F   +    +       ++     T  +  L     +++ +GL ++
Sbjct: 650 FCDWYVELAKVRLYNNEESGKESKTTAQYVL----WTVLEAGLKLL 691



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 72/274 (26%), Gaps = 44/274 (16%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   SP  +      I      +   +       +I     N TG +H+GH     + D
Sbjct: 4   LNKTYSPREIESKWYKIWEDSKYFAGKMEEGKESYSIVIPPPNVTGILHMGHILDNSIQD 63

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G         + AG  I T         +Q +   D               
Sbjct: 64  TLVRYKRMCGLNTLWVPGCDHAG--IATQNKVERMLAEQGIKKED-------LGREKFLE 114

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              +  +KY                          II + L+ +    D          G
Sbjct: 115 ETWKWKEKYG------------------------GIITNQLRKIGASLDWDRERFTMDEG 150

Query: 269 DPSPIRDIIDNLARQGYVYEGIL---------PPPKSKTTQKCDMDRKQLLFRSTMVGDD 319
               +R I  +L   G +Y+G                      + D      +  +   D
Sbjct: 151 LSKAVRKIFVDLYNDGLIYQGEYMVNWCPRCGTALADDEVDHAEKDGNLWHLKYPV--KD 208

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            D  ++ +        AD+A      +  + +++
Sbjct: 209 SDEYIIIATSRPETMLADVAVAVHPEDERYKHLV 242


>gi|218779046|ref|YP_002430364.1| leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226695253|sp|B8F9F0|SYL_DESAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218760430|gb|ACL02896.1| Leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 863

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    +G+   +    K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 13  KWQAHWDAAGLFKVKEDPSKEKYFLMEMF-PYPSGKIHMGHVRNYSIGDVVARFKRMQGF 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|121591517|ref|ZP_01678782.1| valyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546625|gb|EAX56815.1| valyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 625

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|115305781|sp|Q3SRI7|SYE_NITWN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 474

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 95/305 (31%), Gaps = 50/305 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T   +   + +PTG +H+G  R A+     A      G  +       D          +
Sbjct: 2   TTPVVTRFAPSPTGFLHIGGGRTALFNWLYAR---KHGGRMLLRIEDTDRARSTPEAIDA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +    +      D D+   +      + + ++L  +       +   + L  +++ +   
Sbjct: 59  ILDGLKWLGIEWDDDVVYQFSRVARHREIAEQLLAE-GKAYRCYATTEELSEMREKARAE 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
               + D         D   SE       P  ++  I  L            P   +T  
Sbjct: 118 GRAKLYD-----GRWRDRDASEA------PQGVKPTI-RLKA----------PLTGETVI 155

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
           +  +  + +     +     D  LL+ DG+ TY    LA     ++ G  ++I   G DH
Sbjct: 156 EDQVQGRIVWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHIIR--GDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
                R + +   +      +       + L       K+SKR G           +G D
Sbjct: 207 LINAARQKQIYDTLGWALPTMAH-----IPLIHGPDGSKLSKRHG----------ALGVD 251

Query: 421 SVRFM 425
           + R M
Sbjct: 252 AYRAM 256


>gi|78188370|ref|YP_378708.1| glutamyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|115305760|sp|Q3ATL0|SYE_CHLCH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78170569|gb|ABB27665.1| glutamyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 502

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 106/313 (33%), Gaps = 39/313 (12%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA------- 170
             G +V   F + +PTG +HVG  R A+     A  M   G  + R   I D        
Sbjct: 1   MVGQRVRTRF-APSPTGYLHVGGLRTALYNFLFAKKMK--GDFIIR---IEDTDQSRKVE 54

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           GAQ   L  ++ W    A    D     G   G Y++    ++  K+  +LL      + 
Sbjct: 55  GAQ-QNLIKTLEW----AGIIADESPQHGGSCGPYIQSERLDIYAKHCKQLLE-DHHAYY 108

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEG 289
                  ++   ++       L        +           + + +I      G  Y  
Sbjct: 109 CFATPEELEENRQLQ------LKQGLQPKYNRKWLPEEMGGTMPESLIRQKLEAGEPYVI 162

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +  P   +    D+ R  + F S  +    D+ L+KSDG  TY     A     +    
Sbjct: 163 RMKVPDYISVWFEDIIRGPIEFDSATID---DQVLMKSDGFPTYHF---ASVIDDHLMEI 216

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I   G +    + +   +      +  ++       + L  +    K+SKR GD   
Sbjct: 217 SHIIR--GEEWLSSMPKHLLLYEFFGWEAPKVAH-----LPLLLNPDRSKLSKRQGDVAV 269

Query: 410 LRHVVDEVGSDSV 422
             ++     S+++
Sbjct: 270 EDYIRKGYSSEAI 282


>gi|254251624|ref|ZP_04944942.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894233|gb|EAY68113.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 945

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 100/309 (32%), Gaps = 41/309 (13%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQAGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         +  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAQHALPA-GEWLEIDRYAVAFSAQLQ--TELL 720

Query: 510 ENATIAQEPYKLA----FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
            +     E + +      Y    +    G +    ++ RL    A++R     +  L H 
Sbjct: 721 AH-YEKYEFHPVVAKLQTYC---SEDLGGFYLDVLKD-RLYTSAADSRARRSAQTALYHL 775

Query: 566 VA---SIIN 571
                 ++ 
Sbjct: 776 TQGLLRVLA 784


>gi|158316845|ref|YP_001509353.1| isoleucyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112250|gb|ABW14447.1| isoleucyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 1081

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 17/180 (9%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L AV   V ++ +   VL    + L  D    KMSK  G+ +    + D  
Sbjct: 588 DQTRGWFYTLMAVGTLVFDRSSYETVLC---LGLLLDAEGRKMSKHVGNVLDPFDLFDRH 644

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---RQAKDIFPD 474
           G+D+VR++ML   +     +   +V  +S E+ V  +   Y    S F     A D  P 
Sbjct: 645 GADAVRWLMLAGGSP----WSDRRVSHESIEDIVRKILLTYWNTASFFALYAGAADWCPT 700

Query: 475 LDFDLFPRNVIPQESE-FDTSEL-QLIVHLAEYPRVIE--NATIAQEPYKLAFYLYDLAS 530
                      P E    D   L +L   +AE    +E  +A  A    ++A ++ DL++
Sbjct: 701 GADGSGEGAAAPAERPVLDRWALSELADTVAEVDAALEGFDALRAGR--RIARFVDDLSN 758


>gi|300310736|ref|YP_003774828.1| isoleucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300073521|gb|ADJ62920.1| isoleucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 964

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 85/240 (35%), Gaps = 26/240 (10%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD-------GSYTYFAADLAYFKC 343
           L    ++  ++  ++  Q L    ++GD+ D+ L   D          T+        + 
Sbjct: 524 LLEQIAQRIEQGGIEAWQALDPKELLGDEADQYLKNKDTLDVWFDSGSTHQTVLRGSHRQ 583

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           + +   D  +Y+ GSD   G+       ++ ++ +     +L    V    DG   KMSK
Sbjct: 584 ELQFPAD--LYLEGSDQHRGWFHSSLLTSSMLNGRAPYKALLTHGFVV---DGEGRKMSK 638

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
              + +  + V D +G++ +R  +     S  +      +K  ++         AY R R
Sbjct: 639 SLKNGVEPQKVADSLGAEILRLWVASSDYSGEISISEEILKRVTE---------AYRRIR 689

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           +  R       D D       +  +  E D   +  +  L     V+ +     E + + 
Sbjct: 690 NTLRFLLANTSDFDPAQHAVPMA-ELLEIDRYAIANMARLQ--GEVLAH-FETYEFHPVV 745


>gi|299133187|ref|ZP_07026382.1| leucyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298593324|gb|EFI53524.1| leucyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 873

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +        G+   RN   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 8   AREAESRWQQIWDEKGVFASRNDDLRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARY 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  RRAKGHNV 74


>gi|295103899|emb|CBL01443.1| glutamyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 489

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 99/294 (33%), Gaps = 50/294 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          G  +  +               D G  +     
Sbjct: 11  APSPTGYMHVGNLRTALYTYLMAKHEDGTFILRIEDT------------DQGRYVEGAVD 58

Query: 180 SVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            ++   R    L++   D+  G   G Y++     +  +Y+ +L+   +  +     +  
Sbjct: 59  VIYNTLRETGLLWDEGPDI--GGPVGPYVQSERMGMFKQYAEQLVAEGK-AYYCFCTEER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++A+    R         +D    E           ++ ++     G  Y      P+  
Sbjct: 116 LEALHAEQRA--AGEMTHYDGCCRE---------LPKEEVEKRLAAGEPYVIRQKIPREG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   D+    +   ++ +    D+ L+K+DG  TY   + A     +  G  ++I   G
Sbjct: 165 VTGFDDVVYGHIEVNNSEMD---DQILIKTDGMPTY---NFANVVDDHLMGITHVIR--G 216

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           S++     +   +  A          + C  V         K+SKR GD     
Sbjct: 217 SEYLSSTPKYNLLYQAFGWDIP--TYIHCPPVM---KDAQNKLSKRNGDASYQD 265


>gi|311745324|ref|ZP_07719109.1| isoleucine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577859|gb|EAZ82079.1| isoleucine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 1135

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +A  +         ++   + L ++G   KMSKR G+ +     + 
Sbjct: 642 GVDQTRGWFFTLHTIAVML-FDSIAFKNVIANGLVLDKNG--NKMSKRLGNAVDPFKTIK 698

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           E G D+VR+ ML   N  + L F+   V E
Sbjct: 699 EYGPDAVRWYMLSNANPWDNLKFNLEGVAE 728


>gi|67459043|ref|YP_246667.1| leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536521|sp|Q4ULS1|SYL_RICFE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67004576|gb|AAY61502.1| Leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQQIWYDEKAFEVSNESSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|17547177|ref|NP_520579.1| isoleucyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|17429479|emb|CAD16165.1| probable isoleucyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 960

 Score = 43.8 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 80/241 (33%), Gaps = 31/241 (12%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDV 320
            H   P  +  +   + + G      L P +    +    + + D   + F S       
Sbjct: 507 LHPRTPELLEQVAQRIEKNGIEAWQTLDPRELLGDEADLYEKNRDTLDVWFDSGTTHWH- 565

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
              +  S  +  Y  +     +    R  D  +Y+ GSD   G+       A+ +  K  
Sbjct: 566 --VIRGSHAADLYDTS----AELPEGRLAD--LYLEGSDQHRGWFHSSLLTASMLYGKPP 617

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L         DG   KMSK  G+ I  + + +++G++ +R  +     S  L    
Sbjct: 618 YKALLTHGF---TVDGEGRKMSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISD 674

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQ 497
             +K   +          Y R R+  R       D D     R+ +P E   E D   + 
Sbjct: 675 EILKRVVEG---------YRRIRNTLRFLLANLTDYDH---ARHALPPEQWLEIDRYAVA 722

Query: 498 L 498
           L
Sbjct: 723 L 723


>gi|330444687|ref|YP_004377673.1| valyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807797|gb|AEB41970.1| valyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 940

 Score = 43.8 bits (102), Expect = 0.088,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K L +       +  +        +I     N TG +H+GH     + D L   
Sbjct: 11  DPKGVEKALYAFWEEKGMFTADSSSSKPPYSIVMPPPNVTGILHMGHALVNTLQDVLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E       + AG  I T A+                             V + L
Sbjct: 71  KRMQGFETCWIPGTDHAG--IATQAV-----------------------------VERRL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +        F  E++L  V ++  ++  ++I   LK L    D               +
Sbjct: 100 FETLGKRRSQFSREEFLEHVWEWKEKSE-EVILSQLKQLGCSCDWTRKRFTLETSACRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  QG +Y G          Q    D +
Sbjct: 159 KRAFKKLFDQGNIYRGYYLVNWDPVLQTALSDDE 192


>gi|224104805|ref|XP_002313571.1| predicted protein [Populus trichocarpa]
 gi|222849979|gb|EEE87526.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score = 43.8 bits (102), Expect = 0.088,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 91/287 (31%), Gaps = 48/287 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R              +    
Sbjct: 64  APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERS----------TKESEEAV 113

Query: 183 WRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R    L  +  + P  G   G Y +     L  +++ +L+         + + +     
Sbjct: 114 LRDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQHAEKLVESG-----HVYRCFCSNEE 168

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           ++ +++ +  L     ++           + + D +     +G  Y      PK      
Sbjct: 169 LEQMKE-IAKLKQLPPVYTG------KWANAMDDEVQEELAKGTPYTYRFRVPKEGRLTI 221

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGS 358
            D+ R ++ +    +GD     +++S+G   Y      D A           ++I     
Sbjct: 222 NDLIRGEVSWNYDTLGDF---VIMRSNGQPVYNFCVTVDDAT------MAISHVIR--AE 270

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +H     R   +  A+              V L       K+SKR G
Sbjct: 271 EHLPNTLRQALIYKALGFPMPHFAH-----VSLILAPDRSKLSKRHG 312


>gi|182683707|ref|YP_001835454.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
 gi|182629041|gb|ACB89989.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
          Length = 679

 Score = 43.8 bits (102), Expect = 0.088,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 29  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 77  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 129

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 130 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 183

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 184 YFLRLSKYQDRLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 243

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV              G D  G   +     V   V +   + + +   ++ +  
Sbjct: 244 PKHVVYVWIDALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 303

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 304 DVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 352


>gi|224531997|ref|ZP_03672629.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511462|gb|EEF81868.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 480

 Score = 43.8 bits (102), Expect = 0.088,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 118/343 (34%), Gaps = 51/343 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G                     D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDFD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + +  +           ++       +M  +   L+   + +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFKDCRKLNVTYPDKVLIASKHIPIMIEVVKILEEKKVTY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTFSRVDIDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTY--FAADLAYFKCKYERGFDNMIYVMGSDHSG-- 362
            F ++   D     D P      S+     A +L YFK K +      I++ G DH G  
Sbjct: 193 WFTNSKFKDQEMKWDSPWGLGYPSWHLECAAMNLEYFKDKLD------IHLGGVDHIGVH 246

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDS 421
           ++  +  V   +++K   I V    L+  Y      KMSK  G+FIT+  + ++   S  
Sbjct: 247 HINEIAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSLGNFITINDLEEQNFSSLD 301

Query: 422 VRFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAYARCR 462
            R++ L       L F     +  + ++EN +  + Y YA   
Sbjct: 302 FRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLN 344


>gi|317473421|ref|ZP_07932715.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899071|gb|EFV21091.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 655

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 56/409 (13%), Positives = 125/409 (30%), Gaps = 58/409 (14%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +G  H+G+    ++ D++A      GY+V  +   ++ G ++   A       ++ + + 
Sbjct: 23  SGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAAEQGVTPKEFVDDV 82

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             ++         +  +     DK+        E +   I K    Q    I +   + L
Sbjct: 83  AGEIK-------RIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYEQG--DIYKGHYEGL 133

Query: 253 NIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQGYVYEGILPPPK 295
                + F +E     G                    +    D L      +   + P  
Sbjct: 134 YCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFLKLSKYADRLIEYINTHPEFIQPES 193

Query: 296 SK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
            K            Q   + R    +   +  D+     +  D    Y    + Y     
Sbjct: 194 RKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITG-IGYDCDGD 252

Query: 346 ERG-FDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMP 397
               F+ +    ++++G D    + R   +      ++        +      L  DG  
Sbjct: 253 STDQFNKLWPADLHLIGKD----IIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDG-- 306

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-DFDFCKVKEQSKENPVFYVQY 456
            KMSK  G+ +    +      D+VR+ +L     E      +  + E+   +    +  
Sbjct: 307 -KMSKSKGNVLYADDLAGMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTLGN 365

Query: 457 AYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
              R  S+  +      +D   + +FD   + V+    E    ++ ++ 
Sbjct: 366 LVNRTISMSNKYFDGIVEDKGAEDEFDDQLKAVVTGAREKVQKKMDVLR 414


>gi|294676053|ref|YP_003576668.1| valyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474873|gb|ADE84261.1| valyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 1017

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV+ +     V L +LV   RD    KMSK AG+ I    ++DE G+D++
Sbjct: 634 WVARMMMMQLAVTGEIPFHTVYLHQLV---RDEKGKKMSKTAGNVIDPLEIIDEFGADAL 690

Query: 423 RF 424
           RF
Sbjct: 691 RF 692


>gi|289448092|ref|ZP_06437836.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A]
 gi|289421050|gb|EFD18251.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 82/275 (29%), Gaps = 50/275 (18%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            L   ST+   D    L K   +       D+ +F       F      +G D       
Sbjct: 450 ALWPFSTLGWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTF---VGDD------- 499

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             A       +  Q+      L  L RD    KMSK  G+ I     V+  G+D++RF +
Sbjct: 500 --AAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTL 557

Query: 427 LW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                    L      V+                       +  +       +      +
Sbjct: 558 ARGASPGGDLAVSEDAVRASRNFGT----------------KLFNATRYALLNGAAPAPL 601

Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPR 544
           P  +E   ++  ++  L +    +++A    E  +    LY  A   F   +        
Sbjct: 602 PSPNELTDADRWILGRLEDVRAEVDSAFDGYEFSRACESLYHFAWDEFCDWY-------- 653

Query: 545 LRFVQANNRKLTMMRLQ--LVHAVASIINSGLNII 577
                    +L   +L   L H  A ++ +GL+ +
Sbjct: 654 --------LELAKTQLAQGLTHTTA-VLAAGLDTL 679



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 7   DPAAMESAIYQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+   +D        V  + +  + 
Sbjct: 67  KRMQGYEV---------------------------LWQPGTDHAGIATQSVVEQQLAVD- 98

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 99  ----GKTKEDLGRELFVDKVWDWKRESG-GAIGGQMRRLGDGVDWSRDRFTMDEGLSRAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y        S   Q    D +
Sbjct: 154 RTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLE 187


>gi|288801038|ref|ZP_06406494.1| glutamate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331972|gb|EFC70454.1| glutamate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 505

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 93/279 (33%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  V R     D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFAR--QHGGDFVFRIE-DTDSNRFVPGAEEYIIESFRWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   + +  KY  ELLN  ++ ++       ++A    I   
Sbjct: 68  GLTFDEGVGLGGEYGPYRQSERRHIYKKYVDELLNN-DKAYIAFDTPEELEAKRNEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++  +     G  Y               D+ R +
Sbjct: 124 -----TNFQYDASTRQLMRNSLTMSKEECEKRIADGEQYVVRFKVEPGIDVHVHDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ +S ++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVIKSDIID---DKVLYKSADELPTYH---LANIVDDHLMLISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+ L  +G   K+SKR GD
Sbjct: 231 VLLYEAFGWQDTMPQFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|262281236|ref|ZP_06059018.1| valyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257467|gb|EEY76203.1| valyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 965

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 61/220 (27%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K           +     G G    I     N TG +H+GH     + 
Sbjct: 9   NIATTYDPTEIEKKWYQTWEEQGYF--KPSGHGESFCIMIPPPNVTGSLHMGHGFNNAIM 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G                           +  L+   +D        V  +
Sbjct: 67  DALTRYNRMMG---------------------------KNTLWQPGTDHAGIATQMVVER 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +   ++      F E+ W    K+ S   + K IR     L    D          
Sbjct: 100 QLGLQGVTRHDLGRDKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDE 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 154 GLSNAVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLE 193



 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 106/318 (33%), Gaps = 37/318 (11%)

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLP 231
            +A +    +   +   D   P G   GV ++              +   +   ++  + 
Sbjct: 350 LVAQAEAEGWLDQIQPYDLKAPRGDRSGVIIEPLLTDQWYVKIAPLAEPAIEAVQDGRIK 409

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYE 288
            V +      M  +R D++   I   ++        +       +    + +  +  +  
Sbjct: 410 FVPEQYSNMYMAWMR-DIQDWCISRQLWWGHRIPAWYDANGNIYVGRNEEEVRAKNNIAA 468

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            +                  L   ST+   GD     +  +D   T+   D+        
Sbjct: 469 DVELKQDEDVLDTWFSS--ALWTFSTLGWTGDAKQDDV--NDFLKTFHPTDV------LV 518

Query: 347 RGFDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            GFD +I+   +     + +  + E  ++ V  K   ++        L RDG   KMSK 
Sbjct: 519 TGFD-IIFFWVARMIMMTLHFMKNEDGSSQVPFKTVYVH-------GLVRDGEGQKMSKS 570

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-FDFCKV-KEQSKENPVFYVQYAYARC 461
            G+ +    ++D +  +S    ++ ++ + L++  D  K+ K   KE P     Y     
Sbjct: 571 KGNVLDPLDLIDGIDLES----LVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYGTDAV 626

Query: 462 RSIFRQAKDIFPDLDFDL 479
           R  F    +   D+ FDL
Sbjct: 627 RFTFCALANTGRDIKFDL 644


>gi|158422191|ref|YP_001523483.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048039|sp|A8IMK0|SYL_AZOC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158329080|dbj|BAF86565.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 874

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +  +     GI   RN   +     +E     P+G +H+GH R  V+GD LA  
Sbjct: 8   ARDAEPRWQAIWNERGIFRTRNDDPRPKFFVMEMF-PYPSGRIHIGHGRNYVMGDVLARY 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KRMQGFNV 74


>gi|157737467|ref|YP_001490150.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157699321|gb|ABV67481.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 650

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 97/332 (29%), Gaps = 61/332 (18%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D LA     +G      + +         +A S   R +      D ++
Sbjct: 22  HIGHAYTTIIADMLARYSRLTGSNT---FLLTGTDEHGQKIAQSAEIRNKTPKEYAD-EI 77

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN-IQ 255
              +        +  +   + + E      +K   I+          I + + +    + 
Sbjct: 78  SGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKG-----DIYKGEYEGFYCVP 132

Query: 256 HDIFISEDDF--------------------HRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + F  E                       +  + S   + +     +          P+
Sbjct: 133 CETFFPESQLVDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKWYEENE----DCILPR 188

Query: 296 SKTTQKCDMDRKQL-------------LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           SK  +  +  +  L             +     + +      +  D    Y  A L Y  
Sbjct: 189 SKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALLNYITA-LGYGT 247

Query: 343 CKYERGF-DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                 F    I+++G D    HS Y     A   ++     +    +       RDG  
Sbjct: 248 DDKNMNFWPANIHLVGKDILRFHSIY---WPAFLMSLDLPLPK---HIAAHGWWTRDGE- 300

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            KMSK  G+ +  + V D  G D+ R+ ML  
Sbjct: 301 -KMSKSKGNIVNPKEVADAYGLDAFRYFMLRE 331


>gi|158296182|ref|XP_316654.3| AGAP006624-PA [Anopheles gambiae str. PEST]
 gi|157016389|gb|EAA11340.4| AGAP006624-PA [Anopheles gambiae str. PEST]
          Length = 963

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 51/176 (28%), Gaps = 32/176 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L      SG   T    ++ AG     +            
Sbjct: 61  PNVTGELHLGHALTGAIQDALVRQARLSGRRTTWIPGMDHAGIATQVV------------ 108

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V K L  + +    +   E++L  V  + V+     IR  L
Sbjct: 109 -------------------VEKRLLKERNLTRHDLGRERFLQEVMQWKVEKE-DSIRRAL 148

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           K L    D               +++    L  +G +Y        S T +    D
Sbjct: 149 KKLGCSMDWSREYFTMDAHQSVAVKEAFVQLFDRGLIYRDRSLINWSCTLESAISD 204


>gi|78212910|ref|YP_381689.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123743315|sp|Q3AJU8|SYL_SYNSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78197369|gb|ABB35134.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 875

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 92  YLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P+ L +         G++       K     +      P+G +H+GH R  V+ D +
Sbjct: 22  RYDPTALEQRWQESWKADGVDTTEVGGEKPGFFALSMF-PYPSGSLHMGHVRNYVITDVI 80

Query: 151 ASLMAFSGY 159
           A +    G+
Sbjct: 81  ARVQRMLGH 89


>gi|50365307|ref|YP_053732.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
 gi|60390693|sp|Q6F0X5|SYL_MESFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50363863|gb|AAT75848.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 801

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVSEKKAQ 380
           + +DG   +   D A  K ++E+     +YV G +H+     Y +    V   +     +
Sbjct: 500 ILADGENEFIDIDSAEAKKRFEKWMPVDLYVGGQEHAVGHLLYARFWNYVLYDLGITSVK 559

Query: 381 --INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                L  + + L  DG   KMSK  G+ I    +V   G+DS+R
Sbjct: 560 EPFKQLFNQGMILGPDGR--KMSKSWGNVINPDDIVSTHGADSLR 602


>gi|83950451|ref|ZP_00959184.1| isoleucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83838350|gb|EAP77646.1| isoleucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 969

 Score = 43.8 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 78/251 (31%), Gaps = 34/251 (13%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           + L+      + +            +        G +H+GH     + D +       G+
Sbjct: 34  EWLARWQKLDVYHRLRQAEGRKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGF 93

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +     YI         +   +  +Y++   + D  +P   +              K++ 
Sbjct: 94  DAR---YIPGWDCHGLPIEWKIEEQYRKKGRDKD-QVPINDFRAE---------CRKFAD 140

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMK--IIRDDLKALNI---QHDIFISEDDFHRGDPSPIR 274
           E ++   ++     K   +    +   +  D  A  +   +   F+     ++G    + 
Sbjct: 141 EWVDVQRQE----FKRLGITGNWEKPYLTMDFHAERVIAEEFMKFLMNGTLYQGSKPVMW 196

Query: 275 DIIDN--LARQGYVY---EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
             I+   LA     Y   E      K K     D+D  Q++  +T          + S+ 
Sbjct: 197 SPIEKTALAEAEVEYHDKESFTIWVKFKVVNGGDLDGAQVVIWTTTPWT------IPSNK 250

Query: 330 SYTYFAADLAY 340
           +  Y   D+AY
Sbjct: 251 AVVY-GKDIAY 260


>gi|300868849|ref|ZP_07113456.1| Leucyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300333200|emb|CBN58648.1| Leucyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 852

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K   +    G++       K     +      P+G +H+GH R   + D +A L    G
Sbjct: 11  QKWQKAWTEQGLDKTPETSDKPKFYALSMF-PYPSGNLHMGHVRNYTITDVIARLKRMQG 69

Query: 159 YEV 161
           Y V
Sbjct: 70  YRV 72


>gi|206889689|ref|YP_002249792.1| glutamyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|238064695|sp|B5YIG1|SYE_THEYD RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|206741627|gb|ACI20684.1| glutamyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 465

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 96/289 (33%), Gaps = 67/289 (23%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR--EYYINDAGAQINTLALS 180
           + +PTG +H+G  R A+     A       ++     + +R  E Y       I ++  +
Sbjct: 7   APSPTGHLHIGGARTALFNWLFARHHNGKFILRIEDTDRSRSTEEY-------IESIIEA 59

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL----NFPEEKWLPIVKDY 236
           + W     L  ++    +     VY K    +L ++  +          EE+    +K+ 
Sbjct: 60  MKWL---GLDWDEGPFRQTDRMEVY-KAYAYKLLEEGKAYRCYCTPEELEERRQQAMKEG 115

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                 +  R+  + LN    I                                   P  
Sbjct: 116 KPPRYDRRCREIKETLNKPFAIRFK-------------------------------MPLE 144

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   D+ + ++ F+++ +    D  +L+SDG+ TY   +       +E G  ++I   
Sbjct: 145 GETVVDDLVKGKVTFKNSEI---EDLVILRSDGTPTY---NFCVVVDDFEMGITHVIR-- 196

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G DH     +   +  A+     +        + +       ++SKR G
Sbjct: 197 GEDHLNNTPKQIHIYHALGMNPPEFAH-----IPMILGTDRARLSKRHG 240


>gi|307155055|ref|YP_003890439.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306985283|gb|ADN17164.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 854

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   + V  GI+       K     +      P+G +H+GH R  V+ D +A L    G+
Sbjct: 13  KWQQTWVEMGIDKTPEDKTKPKYYALSMF-PYPSGNLHMGHVRNYVITDVIARLKRMQGH 71

Query: 160 EV 161
            V
Sbjct: 72  RV 73


>gi|317010237|gb|ADU80817.1| leucyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 806

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+        K           +         K  I  +   P+G +H+GH R   +G
Sbjct: 3   FINI-------EKKWQEFWWQNKSFEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DVLARYYRLHHYNV 69


>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 459

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 105/313 (33%), Gaps = 55/313 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D +A  + + GYE+T    I D   +I   AL      +Q +     ++
Sbjct: 37  HIGHGRTFVCFDVVARYLRYLGYELTYVRNITDVDDKIIKRALENKETCEQLVDRMVVEM 96

Query: 197 -----------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                      P+      +       + +K       +  +    +    S +   K+ 
Sbjct: 97  YKDFDALNILRPDFEPRATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLS 156

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R DL+ L     I     + +    +P+  ++  +++     E     P  K      ++
Sbjct: 157 RQDLEQLQAGARI-----EINEIKKNPMDFVLWKMSKPN---EPSWDSPWGKGRPGWHIE 208

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   S  +G+  D     SD  + +   ++A                         +
Sbjct: 209 CSAM--NSKQLGEHFDIHGGGSDLMFPHHENEIA-------------------------Q 241

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
              A           +N  L   + +       KMSK  G+F T+R V++   ++SVR+ 
Sbjct: 242 SCCAHGNQ------YVNYWLHSGMIMVD---KEKMSKSLGNFFTIRDVLNHYDAESVRYF 292

Query: 426 MLWRKNSELLDFD 438
           +L       L++ 
Sbjct: 293 LLSAHYRSQLNYS 305


>gi|299768945|ref|YP_003730971.1| valyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298699033|gb|ADI89598.1| valyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 965

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 61/220 (27%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + K           +     G G    I     N TG +H+GH     + 
Sbjct: 9   NIATTYDPTEIEKKWYQTWEEQGYF--KPSGHGESFCIMIPPPNVTGSLHMGHGFNNAIM 66

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G                           +  L+   +D        V  +
Sbjct: 67  DALTRYNRMMG---------------------------KNTLWQPGTDHAGIATQMVVER 99

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +G +   ++      F E+ W    K+ S   + K IR     L    D          
Sbjct: 100 QLGLQGVTRHDLGRDKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDE 153

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 154 GLSNAVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLE 193



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 68/447 (15%), Positives = 141/447 (31%), Gaps = 79/447 (17%)

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLP 231
            +A +    +   +   D   P G   GV ++              +   +   ++  + 
Sbjct: 350 LVAQAEAEGWLDQIQPYDLKAPRGDRSGVIIEPLLTDQWYVKIAPLAEPAIEAVQDGRIK 409

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYE 288
            V +      M  +R D++   I   ++        +       +    + +  +  +  
Sbjct: 410 FVPEQYSNMYMAWMR-DIQDWCISRQLWWGHRIPAWYDANGNIYVGRNEEEVRAKNNIAA 468

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +                  L   ST+      +    +D   T+   D+         G
Sbjct: 469 DVELKQDEDVLDTWFSS--ALWTFSTLGWTGDAQKDAANDFLKTFHPTDV------LVTG 520

Query: 349 FDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           FD +I+   +     + +  + E  ++ V  K   ++        L RDG   KMSK  G
Sbjct: 521 FD-IIFFWVARMIMMTLHFMKNEDGSSQVPFKTVYVH-------GLVRDGEGQKMSKSKG 572

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD-FDFCKV-KEQSKENPVFYVQYAYARCRS 463
           + +    ++D +  +S    ++ ++ + L++  D  K+ K   KE P     Y     R 
Sbjct: 573 NVLDPLDLIDGIDLES----LVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYGTDAVRF 628

Query: 464 IFRQAKDIFPDLDFDL-----------------------FPRNVIPQESEFDTSEL---Q 497
            F    +   D+ FDL                            + QE+  D  EL    
Sbjct: 629 TFCALANTGRDIKFDLKRVEGYRNFCNKIWNATRFVLMNVEGQTVGQEARPDLWELPEQW 688

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS----VF--HGH--WSHGRENPRLRFVQ 549
           ++  L +    +  A         A Y  DLA+     F  + +  W      P L   +
Sbjct: 689 IMSRLQKAEAAVHQAF--------ATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 740

Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNI 576
            +  +   +R  L+     ++ + L +
Sbjct: 741 VSEERKAEVRRVLLA----VMEASLRL 763


>gi|195012009|ref|XP_001983429.1| GH15589 [Drosophila grimshawi]
 gi|193896911|gb|EDV95777.1| GH15589 [Drosophila grimshawi]
          Length = 516

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 36/283 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     SG +      I D       L      R  + 
Sbjct: 31  APSPTGYLHLGGLRTALYNYLFAR---HSGGKFLLR--IED--TDQTRLVPGATERLIED 83

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     ++ E    G   G Y++   ++L  +    LL      +     +  ++ + K 
Sbjct: 84  LLWVGIEIDEGPGFGGTQGPYIQSQRRQLYSEAVERLLANG-SAYRCFCTERRLELLRK- 141

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             + L+   +          +        R+ +++L  +G     I            D+
Sbjct: 142 --EALRTRQVPR--------YDNKCRHLTREQLESLLAKG-TPHCIRFKLTEHEEPLQDL 190

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               +  +  +   + D  ++KSD   TY    LA     +  G  +++   G +     
Sbjct: 191 IYGSV--QHNVSETEGDPVIIKSDQFPTYH---LANVVDDHLMGITHVLR--GVEWQIST 243

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +   +  A   +  Q        + L  +    K+SKR GD 
Sbjct: 244 TKHLLLYKAFGWQPPQFGH-----LPLLVNADGTKLSKRQGDI 281


>gi|160333671|ref|NP_780346.3| valyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
          Length = 1060

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 59/214 (27%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++ +  +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V      + AG  I T A+                             V K
Sbjct: 168 RWHRMRGDRVLWIPGSDHAG--IATQAM-----------------------------VEK 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +     I + L AL    D          G  +
Sbjct: 197 QLWKEQRVRRHELSREDFLRAVWQWKHEKG-GEIYEQLCALGASLDWDRECFTMDAGSSA 255

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 256 AVTEAFVRLYNSGLLYRNRQLVNWSCTLRSAISD 289


>gi|154354312|gb|ABS76243.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5201]
 gi|154354314|gb|ABS76244.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5202]
 gi|154354316|gb|ABS76245.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5203]
          Length = 130

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSV 81
           K+E     +I + +  +       T  A+ LS+   +  + IAE I + +  +   V S+
Sbjct: 30  KIESLANKKIPLSKGINSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSAGVFSI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVVS 108
            I   G+I+L L+   L   L  +V  
Sbjct: 90  QIVPPGWIHLGLAHPVLAGWLQRLVEK 116


>gi|119510000|ref|ZP_01629141.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119465324|gb|EAW46220.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 477

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 107/355 (30%), Gaps = 67/355 (18%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           +E G+  +        ++         H+GH R  +V D +   + F GYEV       D
Sbjct: 19  VEPGKVKMYYCGVTVYDYC--------HLGHARACIVWDVVRRYLQFIGYEVRYIQNFTD 70

Query: 170 AGAQINT-------LALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSS 219
              +I            +V  RY  A + +   L   P   YP       G +       
Sbjct: 71  IDDKILKRSREEHSSMEAVAERYINAYFEDMGRLGIKPADEYPRATHTMNGIQ------- 123

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
            L++  E K      D  V   ++   +  K    +       +D   G    ++     
Sbjct: 124 RLIHELENKGFAYPADGDVYYAVRQFNEYGKLSGRKL------EDMQAGASERVQVEDPE 177

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
             ++   ++  L           +                         G   +     A
Sbjct: 178 YQKKKDPFDFALWKAAKPGEPAWESSWGA--------------------GRPGWHIECSA 217

Query: 340 YFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
             + +     D  I+  G+D     H   + + EAV       K      L   +     
Sbjct: 218 MVRDRLGDTID--IHAGGADLIFPHHENEIAQSEAV-----TGKPLATYWLHNGMVKVDG 270

Query: 395 GMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
               KMSK  G+F T+R ++D  V   +VR  +L  +  + +DF    +   +  
Sbjct: 271 ---EKMSKSLGNFTTIRDLLDRGVEPMAVRLFVLMAQYRKPIDFTDDAIAAATNG 322


>gi|34580499|ref|ZP_00141979.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261884|gb|EAA25388.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQYIWQEEKAFEVSNASSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|317011349|gb|ADU85096.1| valyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 872

 Score = 43.8 bits (102), Expect = 0.091,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 100/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D L       GY+   +  ++ AG  I T  
Sbjct: 38  KGKRFCLMMPPPNVTGVLHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEQGLIVQDHYMVNWCTKDGALSDIEVEYEERKGALYYIKYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPL------LKSDGSYTY 333
               K        R + LF  + +             G  V  PL      + +D    +
Sbjct: 209 LENQKDYLVVATTRPETLFGDSALMVNPNDERYQHLVGQKVILPLINRKIPIIAD---LH 265

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
              +      K   G D   Y +G  H   V ++        ++K  +N    E   L  
Sbjct: 266 VEMEFGTGCVKVTPGHDFNDYEVGKRHHLEVIKIF-------DEKGVLNAHCGEFENLER 318

Query: 392 --YRDGMPIKMSKRA 404
              R+ +  K+ + A
Sbjct: 319 LEARERVVEKLKENA 333


>gi|238650890|ref|YP_002916746.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511551|sp|C4K297|SYL_RICPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238624988|gb|ACR47694.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.091,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQYIWQEEKAFEVSNASSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|221057624|ref|XP_002261320.1| glutamate--tRNA ligase [Plasmodium knowlesi strain H]
 gi|194247325|emb|CAQ40725.1| glutamate--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 575

 Score = 43.8 bits (102), Expect = 0.091,   Method: Composition-based stats.
 Identities = 67/353 (18%), Positives = 121/353 (34%), Gaps = 72/353 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG CR  +    LA       ++     +V R     +A    N +   + 
Sbjct: 91  APSPTGFLHVGGCRTFLYNYILAKQLKGSLILRLEDTDVER-----NAQDSFNEIVKDLR 145

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G   G Y +    EL  K + E +N  +  +        +    
Sbjct: 146 WLNLSWDEGPDV----GGAYGPYKQSEKIELYKKIAHEFVNEGK-AYFCFCTKDELSE-- 198

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K  +  L      +D         R       +++     +G  Y      P  +     
Sbjct: 199 KKEKAKLARTKYTYD---------RACRDLSHEMVKQNMLKGKPYTIRFKSPIGRKIILS 249

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDH- 360
           D+ + +++          D  +L+SD S TY F+A +     +      ++I   G +H 
Sbjct: 250 DILKNEIVDSVNE-----DFIILRSDSSPTYNFSASVDDHLMRIS----HVIR--GVEHI 298

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S   K++  V  A+  +     + L   V +       K+SKR  +++ +R++ +E    
Sbjct: 299 SNTFKQI-LVLEALRAR-----IPLYAHVPVITTVQKKKISKRNNEYL-VRNLREEGFKP 351

Query: 417 ---------VGSDSVRF------------MMLWRKNSELLDFDFCKVKEQSKE 448
                    +G  SV                L   N   L FD  K+K  +K+
Sbjct: 352 DCVINYMGTLGWGSVSKREFYTLDELIASFDLRALNKSALVFDIKKLKWMNKK 404


>gi|85374704|ref|YP_458766.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787787|gb|ABC63969.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 836

 Score = 43.8 bits (102), Expect = 0.091,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 95/327 (29%), Gaps = 68/327 (20%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPLLKSD--------- 328
             G+     LP    K         K +     F  T      D  + ++D         
Sbjct: 457 EHGWAKAPDLPVMLPKDVDFSQGSGKAMASAPGFLETTFPGTSDPAIRETDTMDTFMCSS 516

Query: 329 -GSYTYFAADLAYFKCKYERGFDNMI--YVMG----SDHSG-YVKRLEAVAAAVSEKKAQ 380
             ++ Y  A       +  R  D M   Y +G    +     Y + +     A+      
Sbjct: 517 WYAWRYLDAKNGEQAFRESRAEDWMPIDYYVGGLEHASQHLIYFRFISHFLHAIGMTPTS 576

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
             V       L + G   KMSK  G+ +     VD+ G+D++R  +L        D D+ 
Sbjct: 577 EPVKNFLDNGLVKLG-GEKMSKSKGNVVIPTEAVDKYGADALRLYILADTPLRR-DIDWD 634

Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
               + K+                 R    I+           +  + +    +E   + 
Sbjct: 635 DSGIEGKQ-----------------RFLSQIWTLAGQIASAPALEGEPAPGTDAEKAAMR 677

Query: 501 HLAEYPRVIENATIAQEPYK-----LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
            LA+   + +      E  +     +A          H      R         A++ + 
Sbjct: 678 ELAK---IAKEVAEDLEERRGFHNAIAR--------LHSFVGELRPL----VAGASDAEK 722

Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582
            ++R         ++   + ++GV +P
Sbjct: 723 PLLR--------HVMAEFMKVLGVFAP 741



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                ++       K  +  +      P+G  H+GH R   + D +A L  F G+E 
Sbjct: 33  WAAENVDACDLDSDKPKRYVLGMF-PYPSGNAHMGHVRVYAISDAVARLSRFRGFET 88


>gi|313681647|ref|YP_004059385.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154507|gb|ADR33185.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 815

 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +      +   K  K  +      P+G +H+GH R   +GD  A      G
Sbjct: 10  AKWQKTWSTTKAYEPSDDFSKPKKYVLSMF-PYPSGRIHMGHVRNYTIGDAFARYYRQQG 68

Query: 159 YEV 161
           + V
Sbjct: 69  FNV 71


>gi|239947311|ref|ZP_04699064.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921587|gb|EER21611.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 834

 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQQIWQEEKAFEVSNESSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|118602372|ref|YP_903587.1| isoleucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166229765|sp|A1AW09|SYI_RUTMC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118567311|gb|ABL02116.1| Isoleucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 922

 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 85/241 (35%), Gaps = 23/241 (9%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFKC 343
           ++  I    + +  +       Q    +     D    +L    D   ++F       K 
Sbjct: 484 LFVSIANRIEKEGIEAWFKSDAQDFIGNDANDYDKTTDILDVWFDSGVSHFTV----LKA 539

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           + E      +Y+ G+D   G+ +     + A++ K    NVL    V    D    KMSK
Sbjct: 540 RKELSNVADLYLEGADQHRGWFQLSLISSVAINGKAPYKNVLTHGFVV---DKNGKKMSK 596

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ ++ + +V+ +G+D +R  +     +  +     ++ ++S +        +Y R R
Sbjct: 597 SLGNVMSPQKIVNNLGADVLRLWIASTDYTSEMTVG-DEILKRSAD--------SYRRIR 647

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           +  R    +  ++       +++  +   D  +  +    A     I  A      + + 
Sbjct: 648 NTMR---FMLANMQAFNPVEHLLDNKQMLDLDKWIVAKT-ANLQTQIIKAYEQYNFHHVV 703

Query: 523 F 523
            
Sbjct: 704 Q 704


>gi|15892508|ref|NP_360222.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|32130175|sp|Q92I35|SYL_RICCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15619667|gb|AAL03123.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQYIWQEEKAFEVSNASSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|157828457|ref|YP_001494699.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933175|ref|YP_001649964.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166231640|sp|A8GS16|SYL_RICRS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083140|sp|B0BXI2|SYL_RICRO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157800938|gb|ABV76191.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908262|gb|ABY72558.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQYIWQEEKAFEVSNASSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|222148592|ref|YP_002549549.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735578|gb|ACM36541.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 525

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 99/330 (30%), Gaps = 45/330 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     ++    
Sbjct: 14  PNGKPHIGHAYELIATDAMARFQRLDGKDVFFLTGTDEHGQKMQQTARNEGIAPEELAKR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD-------YSVQ 239
           N  +              +++                   EK   I KD          +
Sbjct: 74  NSDEFRAMGKLLNASNDDFIRTTEARHHAASQEIWKRM--EKNGDIYKDSYAGWYSVRDE 131

Query: 240 AMMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YE 288
           A       +++A  +++        ++ E+ +     +    ++     Q          
Sbjct: 132 AYYAEDETEMRADGVRYGPQGTPVEWVEEESYFFRLSAYEDKLLKLYEDQPDFIGPNERR 191

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC----- 343
             +        +   M R    +   + GDD     +  D    Y  A   Y        
Sbjct: 192 NEVLSFVKSGLKDLSMSRTTFDWGIKVPGDDKHVMYVWVDALTNYITA-TGYLTDENGPR 250

Query: 344 -KYERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            KY     ++I   G D    + R  AV   A  +S   A    +      L +     K
Sbjct: 251 AKYWPADAHII---GKD----IIRFHAVYWPAFLLSAGVALPKRIFAHGFVLNKG---EK 300

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           MSK  G+ +    ++ + G D+VR+ +   
Sbjct: 301 MSKSLGNVVDPFDLLQQFGLDNVRYFLCRE 330


>gi|85374072|ref|YP_458134.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787155|gb|ABC63337.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 519

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 65/339 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D +A      G +V  +   ++ G ++         R  +    
Sbjct: 14  PNGRPHIGHAYEAIAADVIARFQRQRGLDVRFQTGTDEHGLKM--------ARKAEEQGK 65

Query: 192 NDSDLPEG--YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +  DL +    Y       +     D++   + +        I +  +++A   +  D  
Sbjct: 66  SPRDLADEMSGYFKAMCDALNV-SCDRFIRTVDDDHHRASQAIWR--AMEAAGDLYLDRY 122

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +    ++ + +  E +   G+        + L+ QG   E  +         K + D+  
Sbjct: 123 EGWYSVRDEAYYDESELVDGEGD------EKLSPQGTPVEWTVEESWFFRLSKYE-DKLL 175

Query: 309 LLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM-G 357
            L  S    +   R          G       DL+  +  ++ G       D+++YV   
Sbjct: 176 KLLESPGFLEPASRRNEMVAFVKQG-----LRDLSVSRTSFDWGVKVPGSEDHVMYVWVD 230

Query: 358 S------------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI------- 398
           +            D   + K   A    + +   + + +      L   G+P+       
Sbjct: 231 ALTNYITGLGYPDDTELWRKHWPADLHLIGKDIVRFHTIYWPAF-LMSAGLPVPKQVFGH 289

Query: 399 --------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                   K SK  G+      + D  G D++R+ ++  
Sbjct: 290 GFVLKDGRKESKSLGNVTDPHDLADFYGVDALRYFLMRE 328


>gi|89075938|ref|ZP_01162313.1| valyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048379|gb|EAR53957.1| valyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 953

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G               D +
Sbjct: 152 AVQEVFVRLYQEDLLYRGKRLVNWDPKLHTAISDLE 187


>gi|148260952|ref|YP_001235079.1| glutamyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|238686673|sp|A5FZX8|SYE1_ACICJ RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|146402633|gb|ABQ31160.1| glutamyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 466

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 46/282 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A                   G Q     L V    ++ 
Sbjct: 8   APSPTGMLHIGGARTALFNYLFAR----------------HHGGQF---LLRVEDTDRER 48

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV---QAMMKII 245
                + +       + LK     +             E+ L   + Y     +  +  +
Sbjct: 49  STPEATKVILDALDWLDLKPDEPPVYQSTRYARHREVAEQMLAAGQAYRCYCSREELAEM 108

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R + +             D    +     D +  L             P+   T   D+ 
Sbjct: 109 RAEAERSKKPFRYDGRWRDRDPAEAPAGVDPVIRLRA-----------PREGETVIHDLV 157

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++  ++  +    D  LL+SDG+ TY     A     ++ G  ++I   G DH     
Sbjct: 158 QGEVRVKNAELD---DMILLRSDGTPTYLH---AVVVDDHDMGITHVIR--GDDHLTNTF 209

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           R   +  A+   +          + L       K+SKR G  
Sbjct: 210 RQAQIYDAMGWARPNFAH-----IPLIHGADGAKLSKRHGAV 246


>gi|297831470|ref|XP_002883617.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329457|gb|EFH59876.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 32/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS + K       +   +  +      +  I     N TG +H+GH     V DTL   
Sbjct: 78  SPSAVEKSWYEWWETSEFFKADATSSKPQFVIVLPPPNVTGALHIGHALTCAVQDTLIRW 137

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+        + AG     +                               V K L
Sbjct: 138 KRMSGFNALWVPGFDHAGIATQVV-------------------------------VEKHL 166

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           + +      +F  E++L  V  +  ++    I+  L+ +    D               +
Sbjct: 167 SRETGLTRHDFGREEFLNHVWQW-TESKSGTIKSQLRRMGSSLDWSRECFTMDEHRSKAV 225

Query: 274 RDIIDNLARQGYVYEGI 290
            +    L ++G +Y  +
Sbjct: 226 TEAFVRLHKEGLIYRDL 242


>gi|320010826|gb|ADW05676.1| valyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 884

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 31  APADVEGKLYERWVERGYFTADPESEKPPYTIVIPPPNVTGSLHLGHAFQHTLMDALTRR 90

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE             ++   ++   + +Q L                        
Sbjct: 91  KRMQGYEAL-------WLPGMDHAGIATQNKVEQQLG----------------------- 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E ++  V  +  +   KI+   ++ L    D          G  + +
Sbjct: 121 --EEGKSRHDLGREAFVERVWQWKEEYGGKILGQ-MRRLGDGVDWSRERFTMDEGLSAAV 177

Query: 274 RDIIDNLARQGYVYEG 289
           + +   +     +Y  
Sbjct: 178 QTVFKKMYDDELIYRA 193


>gi|257055270|ref|YP_003133102.1| valyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585142|gb|ACU96275.1| valyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 882

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+     +    VS   +  +        +I     N TG +H+GH     + D +   
Sbjct: 16  NPAEEEAAIYQRWVSAGYFEADAASDKPPFSIVLPPPNVTGSLHMGHALNHTLMDAMTRR 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE                    V W            LP   + G+  ++V +  
Sbjct: 76  RRMQGYE--------------------VLW------------LPGMDHAGIATQNVVERE 103

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K      +   E+++  V ++  +   KI+ D +K L    D               +
Sbjct: 104 IAKEGLSRHDLGRERFVERVWEWKAEYGGKIL-DQMKRLGDGVDWSRERFTMDESLSRAV 162

Query: 274 RDIIDNLARQGYVYEG 289
           + +   L   G VY  
Sbjct: 163 QTMFKRLYDDGLVYRA 178


>gi|222148981|ref|YP_002549938.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735967|gb|ACM36930.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 947

 Score = 43.8 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 32/183 (17%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
                 G N         I     N TG +H+GH     + D +       G +V  +  
Sbjct: 22  AEAFRAGVNAKPGAESFTIVIPPPNVTGSLHMGHALNNTLQDIMIRFERMRGKDVLWQPG 81

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           ++ AG     +                               V ++L +K          
Sbjct: 82  MDHAGIATQMV-------------------------------VERQLMEKQLPGRREMGR 110

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           + ++  V ++  ++   +I + LK L    D          G    + ++   L +QG +
Sbjct: 111 DAFIDKVWEWKDESG-GLIFNQLKRLGASCDWSRERFTMDEGLSEAVLEVFVTLYKQGLI 169

Query: 287 YEG 289
           Y+ 
Sbjct: 170 YKD 172



 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 31/234 (13%)

Query: 347 RGFDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            GFD +I+   +     S +  + EA       +   ++        L RD    KMSK 
Sbjct: 544 TGFD-IIFFWVARMMMMSLHFMKDEAGNPVEPFETVYVH-------ALVRDKNGQKMSKS 595

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I    ++DE G+D++RF  L    ++  D      +     N          +  +
Sbjct: 596 KGNVINPLELIDEYGADALRFT-LTIMAAQGRDVKLDTARVAGYRNFG-------TKLWN 647

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
             R A       D    P       + +      ++  L    R +  A         A 
Sbjct: 648 ATRFAGMNGVKSDPSFLPEAATLAINRW------ILTELTRAEREVTEAIAHFRFNDAAS 701

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            LY    V++       E  +  F   +    T  +       A ++     ++
Sbjct: 702 ALYRF--VWNQFCDWYLELLKPVFAGEDEVAKTEAQ----ACAAYVLEQTYKLL 749


>gi|332866361|ref|ZP_08436966.1| valine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332734709|gb|EGJ65813.1| valine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|308184894|ref|YP_003929027.1| valyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060814|gb|ADO02710.1| valyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 872

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 94/306 (30%), Gaps = 38/306 (12%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  KG +  +     N TG +H+GH     + D LA      GY+   +  ++ 
Sbjct: 29  IDGNEKIQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDH 88

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D                  E  +K    +L   +   
Sbjct: 89  AG--IATQNVVEKQLLNQGIKKED-------LGREEFVQKVWEWKEKSGGAILEQMKRLG 139

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 140 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDGALSDIEVEYEERK 199

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLA 339
           G +Y         K        R + LF  + +     D+  + L+            + 
Sbjct: 200 GALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKAILPLINRKIP 259

Query: 340 YFKC------------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                           K   G D   Y +G  H     ++        ++K  +N    E
Sbjct: 260 IIADAHVEMEFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGE 312

Query: 388 LVRLYR 393
              L R
Sbjct: 313 FENLER 318


>gi|299066162|emb|CBJ37345.1| Valine--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 973

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 65/229 (28%), Gaps = 47/229 (20%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ + +  S+   +       L        I+    N TG +H+GH     + D L  
Sbjct: 17  FEPAAIEQKWSAAWEAMGISRATLEAGRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTR 76

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG  I T  +       Q +  +D   P               
Sbjct: 77  HARMQGANTLWVPGTDHAG--IATQIVVERQLDAQGISRHDLGRP--------------A 120

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS- 271
             DK                 K+ S   + + IR    +++        E ++   DP  
Sbjct: 121 FVDKVWE-------------WKEESGSTITRQIRRMGASID-------WEREYFTMDPKM 160

Query: 272 --PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + D+   L  QG +Y G        +L    S      + +   L 
Sbjct: 161 SRAVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGALW 209


>gi|332872576|ref|ZP_08440545.1| valine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|322509226|gb|ADX04680.1| valS [Acinetobacter baumannii 1656-2]
 gi|323519255|gb|ADX93636.1| valyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332739262|gb|EGJ70120.1| valine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|332854197|ref|ZP_08435217.1| valine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332728122|gb|EGJ59510.1| valine--tRNA ligase [Acinetobacter baumannii 6013150]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|254719210|ref|ZP_05181021.1| glutamyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984205|ref|ZP_06096940.1| glutamyl-tRNA synthetase 2 [Brucella sp. 83/13]
 gi|306837958|ref|ZP_07470816.1| glutamyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662797|gb|EEZ33058.1| glutamyl-tRNA synthetase 2 [Brucella sp. 83/13]
 gi|306406882|gb|EFM63103.1| glutamyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 473

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|242036539|ref|XP_002465664.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
 gi|241919518|gb|EER92662.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
          Length = 597

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 108/332 (32%), Gaps = 49/332 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
              P H+G     +  D +A        E    +           +A S     +    +
Sbjct: 70  VNAPPHMGSAYTTIAADAIARFQRLQ--EKNVIFITG-TDEHGEKIAASAEASGRNPKEH 126

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDL 249
            D+            K +  +L  +Y  + +   + K   +V ++  + +    I R D 
Sbjct: 127 CDA-------ISSSYKTLWADLDIEY-DKFIRTTDSKHEAVVNEFYSRVLNSGDIYRADY 178

Query: 250 KALN-IQHDIFISEDDFHRGD--PSPIRDIIDNLARQGYV----YEGILPPPKSKTTQKC 302
           + L  +  + +  E +    +  P  ++  ++      +     Y+  L    ++     
Sbjct: 179 EGLYCVSCEEYKDEKELLENNCCPVHLKPCVERKEDNYFFALSKYQHKLEELLTRNPDFV 238

Query: 303 D----MDRKQLLFRSTMVGDDVDRPLLK----------------SDGSYTYFAADL---- 338
                ++  Q   +S +    + R  ++                 D    Y +A L    
Sbjct: 239 RPSYRLNEVQGWIKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISALLDDGE 298

Query: 339 -AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
            A  +   + G+   ++++G D    + R  AV        A + V        +     
Sbjct: 299 QASLQQAVDHGWPASLHLIGKD----ILRFHAVYWPAMLMSAGLTVPDTVFGHGFLTKDG 354

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +KM K  G+ +  + +V+  G+D+VR+  L  
Sbjct: 355 MKMGKSLGNTLEPKDLVERFGADAVRYFFLRE 386


>gi|239502322|ref|ZP_04661632.1| valyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|241068522|ref|XP_002408458.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492446|gb|EEC02087.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 819

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 8   QKWQQIWQEEKAFEVSNESSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 66

Query: 159 YEV 161
           + V
Sbjct: 67  FNV 69


>gi|184159315|ref|YP_001847654.1| valyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|183210909|gb|ACC58307.1| Valyl-tRNA synthetase [Acinetobacter baumannii ACICU]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|27904642|ref|NP_777768.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38605104|sp|Q89AU9|SYI_BUCBP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27904039|gb|AAO26873.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 939

 Score = 43.8 bits (102), Expect = 0.094,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 27/202 (13%)

Query: 337 DLAYFKCKYERGFDNM--IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            L+    K +   +N+  +Y+ G D   G+      ++AA+S +     V+    V    
Sbjct: 541 QLSNIYNKIQHQHNNISDLYIEGLDQHRGWFMSSLIISAAISNQTPYKKVITHGFVV--- 597

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    V++ +GSD +R               + K    S+E  +  
Sbjct: 598 DKNKKKMSKSIGNTVHPSEVINTLGSDILRLWTASTN--------YSKEMSISQETLIHI 649

Query: 454 VQYAYARCRSIFR----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
             Y Y R R+  R       +  P+ D  +  +N+I  +       L +          I
Sbjct: 650 SDY-YRRIRNTARFLLANLHEFNPENDL-INAKNMIILDKWAIGKALHIQKK-------I 700

Query: 510 ENATIAQEPYKLAFYLYDLASV 531
             +      + +  YL +  S+
Sbjct: 701 IKSYKNYNFHDVIKYLMNFCSL 722


>gi|323498435|ref|ZP_08103431.1| glutamyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323316508|gb|EGA69523.1| glutamyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 475

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KAQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + +++ IR +
Sbjct: 61  MQWMGLEWDEGPYFQSKRFDRYNEMVDKL------LAEDKAYKC---YASKELLEEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  N A Q G  +      PK  +    D  R 
Sbjct: 112 QEAA----------KEMPRYDANHPKVVAANAAAQEGDAFVVRFRNPKEGSVVFEDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEIANSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|303328459|ref|ZP_07358896.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861453|gb|EFL84390.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 947

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 35/260 (13%)

Query: 268 GDPSPIRDIIDNLARQ----GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            DP+ +RDI D  A+      Y YE  L         KC         + + + D     
Sbjct: 485 NDPAWMRDISDRFAKHPTGCDYWYEADLSEIVPDGL-KCPHCGGSHWTKESDILD----- 538

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQIN 382
            +  D   ++     A  + + E  +   +Y+ GSD   G+      V+     +    +
Sbjct: 539 -VWFDSGTSFA----AVLEARPELSYPADLYLEGSDQHRGWFHSSLLVSEGTRGRPPYRS 593

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL    V    DG   KMSK  G+ I  + ++++ G++ VR  +   +  E +     ++
Sbjct: 594 VLTHGYVV---DGEGRKMSKSIGNVIAPQELIEKFGAEIVRLWVSSVEYREDI-----RI 645

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVH 501
            +Q     V     AY R R+  R    I  ++D         + Q    D   L +   
Sbjct: 646 SDQILGRLVD----AYRRIRNTCR---FILGNIDGLSQADLLPLEQLLPLDRFALDVA-- 696

Query: 502 LAEYPRVIENATIAQEPYKL 521
            A     ++ A    E +K+
Sbjct: 697 -ARMHERVQQAYTDFEFHKV 715


>gi|260557275|ref|ZP_05829491.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409381|gb|EEX02683.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|284034987|ref|YP_003384917.1| isoleucyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283814280|gb|ADB36118.1| isoleucyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 1148

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+ +     +D
Sbjct: 654 GVDQTRGWFFTLHAIAGMLFDSVAFKNVVSTGLV---LDKNGNKMSKRLGNAVNPFETLD 710

Query: 416 EVGSDSVRFMMLWR 429
           + G+D+ R+ M+  
Sbjct: 711 KYGADATRWYMITN 724


>gi|227114626|ref|ZP_03828282.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 951

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +        +I     N TG +H+GH     + DTL   
Sbjct: 6   NPQDIEQPLYEHWEKQGYFKPHGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  E ++  +  +  ++   I    ++ L    D          G  + +
Sbjct: 95  AAEEGKTRHDYGREAFIDKIWQWKGESGGNITNQ-MRRLGNSVDWERERFTMDEGLSNAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          +    D +
Sbjct: 154 KEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|295838904|ref|ZP_06825837.1| valine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695457|gb|EDY42390.1| valine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 873

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 74/268 (27%), Gaps = 44/268 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + + L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 20  TPADVERPLYERWVERGYFEADAKSEKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRR 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E             ++   ++   + +Q L                        
Sbjct: 80  KRMQGHETL-------WQPGMDHAGIATQNKVEQQLAGE--------------------- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V  +  +     I   ++ L    D          G    +
Sbjct: 112 ----GKSRHDLGREAFIARVWQWK-EEFGGKILGQMRRLGDGVDWSRERFTMDEGLSQAV 166

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           + I   L     +Y                S    +   D  +L+  S   GD  +  ++
Sbjct: 167 QTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDDDGELV--SMRYGDGDESIVV 224

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  + T    D A      +  + ++I
Sbjct: 225 ATTRAET-MLGDTAVAVHPDDERYRHLI 251


>gi|169794910|ref|YP_001712703.1| valyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213157685|ref|YP_002320483.1| valyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482456|ref|YP_002324642.1| valyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301344917|ref|ZP_07225658.1| valyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301595163|ref|ZP_07240171.1| valyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169147837|emb|CAM85700.1| valyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213056845|gb|ACJ41747.1| valyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987761|gb|ACJ58060.1| valyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 959

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|229586699|ref|YP_002845200.1| leucyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511550|sp|C3PNE7|SYL_RICAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|228021749|gb|ACP53457.1| Leucyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 835

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K              N   K     +E +   P+G +HVGH R   +GD +A  M   G
Sbjct: 6   QKWQYIWQEEKAFEVSNASSKPKYYVLEML-PYPSGKIHVGHVRNYSIGDVIARFMTMQG 64

Query: 159 YEV 161
           + V
Sbjct: 65  FNV 67


>gi|148379082|ref|YP_001253623.1| glutamyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932830|ref|YP_001383466.1| glutamyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937156|ref|YP_001387013.1| glutamyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|153938314|ref|YP_001390449.1| glutamyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168178516|ref|ZP_02613180.1| glutamyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226948369|ref|YP_002803460.1| glutamate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|187470983|sp|A7FSY9|SYE_CLOB1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|187470984|sp|A5I0T6|SYE_CLOBH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|187470985|sp|A7GCD9|SYE_CLOBL RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|148288566|emb|CAL82647.1| glutamyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928874|gb|ABS34374.1| glutamyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152933070|gb|ABS38569.1| glutamate--tRNA ligase [Clostridium botulinum A str. Hall]
 gi|152934210|gb|ABS39708.1| glutamate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|182671212|gb|EDT83186.1| glutamyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226841301|gb|ACO83967.1| glutamate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|295318533|gb|ADF98910.1| glutamate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 485

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +Y+ +L+   E             
Sbjct: 59  IYNTLKITGLSHDEGP-DIGGPVGPYVQSERRNIYIEYAEKLIEKGEA------------ 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ L  L    +       + +      ++ ID    +G  Y      P + +T
Sbjct: 106 YYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIDKKIAEGVPYVIRQKNPTTGST 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 166 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 218 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 266


>gi|86359694|ref|YP_471586.1| leucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|123724702|sp|Q2K2S7|SYL_RHIEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86283796|gb|ABC92859.1| leucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNSDPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783950|ref|YP_089779.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|61216165|sp|Q65PC8|SYC_BACLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346452|gb|AAU39086.1| CysS [Bacillus licheniformis ATCC 14580]
          Length = 467

 Score = 43.8 bits (102), Expect = 0.095,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 114/353 (32%), Gaps = 48/353 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+   + + GYEV    Y+++     + L      +   
Sbjct: 29  CGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYEVQ---YVSNFTDVDDKLI-----KAAN 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGK---ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            L      + E +    Y + VG      AD +     N  E           +  +  +
Sbjct: 81  ELGEEVPVIAERFIK-AYFEDVGSLGCTKADCHPRVTENMDE----------IIDFIQTL 129

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I     A     D++     F  G        +D L        G       K     D 
Sbjct: 130 IDKGY-AYEADGDVYYKTRSF-EGYGKLSHQSVDELRS------GARIQVGEKKEDALDF 181

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L   +       D P  K    +    + +A    KY     + I +         
Sbjct: 182 ---TLWKAAKDNEISWDSPWGKGRPGWHIECSAMA---RKY---LGDSIDIHAGGQDLAF 232

Query: 365 KRLE---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
              E   A + A++ K      L    + +  +    KMSK  G+F+ +  ++ E     
Sbjct: 233 PHHENEIAQSEALTGKPFAKYWLHNGYINIDNE----KMSKSLGNFVLVHDIIKEHDPQV 288

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +RF ML       +++    +  ++ +N    ++ AY+  +   + + ++   
Sbjct: 289 LRFFMLSVHYRHPINYSVELL--ENTKNAFGRLKTAYSNLQHRLKSSTNLTEG 339


>gi|325971142|ref|YP_004247333.1| isoleucyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026380|gb|ADY13139.1| Isoleucyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 1042

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 32/243 (13%)

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +D+L  + +V +   P P  K T +   D     F S  +                Y   
Sbjct: 491 VDDLH-KHFVDDLTWPSPDGKGTMRRIGDVLDCWFESGSMPY----------AQQHYPFE 539

Query: 337 DLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +  YF+  +   F       G D   G+   L  +AA +  +K      +   + L  +G
Sbjct: 540 NKEYFEQHFPADF----ICEGLDQTRGWFYTLTVIAAGL-WEKPAFTHCITNGIVLTAEG 594

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKENPVFY 453
              KMSK   ++     +V   G+DS+RF ++      +E L F    VKE  K   +  
Sbjct: 595 K--KMSKSERNYTDPMEIVKLYGADSLRFALMNSAVVRAEDLKFSEESVKEVLKTLIIPL 652

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                    S F          + D +  +    +   +  +  +   L  + + +  A 
Sbjct: 653 W-----NAYSFF------VTYANIDGYEASETAFDDLTNPMDRWITSALQRFVQEVTAAF 701

Query: 514 IAQ 516
            A 
Sbjct: 702 DAY 704


>gi|319941944|ref|ZP_08016265.1| isoleucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804597|gb|EFW01467.1| isoleucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 956

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 26/233 (11%)

Query: 275 DIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           D  + + + +  V EG +      T ++   +  +   +ST + D     +    G+  Y
Sbjct: 517 DTFEIMKKVEALVAEGGIEAWTKATPEELIGEDAKNYVKSTDILD-----VWFDSGTTHY 571

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
                   K       D  +Y+ GSD   G+          +  +     +L        
Sbjct: 572 TVMR-GSHKDILGWPAD--LYLEGSDQHRGWFHSSLLTGTMLDGRPPYNQLLTHGF---C 625

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            D    KMSK  G+ +  + + D+ G++ +R  +     S  L      +    +     
Sbjct: 626 VDEKGEKMSKSKGNVVRPQEINDKYGAEILRLWVASTDYSGELRLGPTIINRVVE----- 680

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
               +Y R R+  R       D   +   ++ +P E   +     +    A++
Sbjct: 681 ----SYRRIRNTLRFLLANTSDFSME---KDAVPVEDMLELDRWAVAYA-ADF 725


>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 466

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 122/393 (31%), Gaps = 66/393 (16%)

Query: 114 RNLIGKGTKVNIEFVSANPT--GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +    +  K  ++  S  PT     H+G+ R  +V D L + + + GYEVT      D  
Sbjct: 11  KEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEVTFVQNFTDVD 70

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            +I      +    ++ +                      E+ADKY  E   + +   + 
Sbjct: 71  DKI------IKKANEEGIS-------------------AIEVADKYIDEY--YKDAAAIG 103

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           I K      + + I++    +    D+      +  G    +   +      G +    +
Sbjct: 104 IRKATVHPRVTENIKEI---IGFIQDLIDKGFAYVLG--GDVYFEVKKFDEYGKLSHKNI 158

Query: 292 PPPKSKTTQKCDMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
               S      +  +K      L           D P       +    + ++    KY 
Sbjct: 159 DELISGARIDVNEQKKSPLDFALWKEKKEGEIGWDSPWGVGRPGWHIECSVMS---NKY- 214

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G +  I +            E   A  SE K         +   Y +   +KMSK  G+
Sbjct: 215 LGAN--IDIHSGGQDLIFPHHENEIAQ-SECKNGCTFANYWMHNGYINIDNVKMSKSLGN 271

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
           F T+R V+     D +RF ML       +++    +                   +S   
Sbjct: 272 FFTVRDVLKVYDGDVLRFFMLTSHYRSPINYSKDLLDS----------------AKSSLD 315

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
           + K+    LDF L       Q+ E    E  ++
Sbjct: 316 RIKNCKSSLDFSLQK----SQDKEVSQEEKDIL 344


>gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 508

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 353 IYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I + G          E   A +V      +         L  DG   KMSK  G+F TL+
Sbjct: 221 IDIHGGGQDLMFPHHENENAQSVCAWSQPLAHYWMHTGMLRVDGE--KMSKSLGNFYTLK 278

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D   +D VR +ML       LDF F ++K    +  +  ++     C    R A + 
Sbjct: 279 DVLDTYSADEVRLLMLQTHYRAPLDFSFERLK--GAQGTLARIK----SCVKNLRWAAEH 332

Query: 472 FPD 474
             +
Sbjct: 333 DSE 335


>gi|294673782|ref|YP_003574398.1| isoleucine--tRNA ligase [Prevotella ruminicola 23]
 gi|294471627|gb|ADE81016.1| isoleucine--tRNA ligase [Prevotella ruminicola 23]
          Length = 1186

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSK  G+ +    ++ 
Sbjct: 702 GVDQTRGWFFTLHAIATMIFDSVAFKNVISSGLV---LDAKGNKMSKHVGNVVNPFDMIG 758

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD+VR +MM   +  + L FD   V E  ++          F+  YA
Sbjct: 759 KYGSDAVRLYMMTNSEPWDNLKFDPEGVDEVRRKFFGTLYNTYSFFALYA 808


>gi|284997707|ref|YP_003419474.1| valyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445602|gb|ADB87104.1| valyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 842

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYL 206
                GY V           Q     L V +R       +Q       +  E       +
Sbjct: 109 FKRLEGYNVL---LPQGWDTQGLPTELKVQYRLGIPKDNRQLFLQKCIEWTEDMIK--KM 163

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           K     L   Y  E   F  + + P  +    ++++ + + +L
Sbjct: 164 KEAMIRLG--YRPEWERFEYKTYEPKYRKIIQKSLIDMYKTNL 204



 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L     +   F + 
Sbjct: 556 FTTVLIHGQVLGPDGT--RMSKSKGNVVSPLDRVDEFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|269123021|ref|YP_003305598.1| valyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314347|gb|ACZ00721.1| valyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 879

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 68/226 (30%), Gaps = 16/226 (7%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +    I      +  +   K     I     N TG +H+GH     + D +       
Sbjct: 9   IEQKWYKIWEENGYFKPSKDDKKPAYTIVIPPPNVTGVLHMGHVLNNTIQDVVIRYKRMK 68

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+   +   + AG     +         +      +   E      ++K V  E  +K+
Sbjct: 69  GYDTLWQTGTDHAGIATQNVV--------ERKLAESNLRKEDLGREEFIKKV-WEWKEKH 119

Query: 218 SSELLNFPEE-------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
              +             +      D  +   +K +   L    + +      +   R   
Sbjct: 120 GGIITKQQRRIGNSVDWERERFTMDEGLSEAVKEVFVTLYNQGLIYKGEYMVNWCPRCTT 179

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           +   D I+++ ++G ++E   P    +        R + +   T +
Sbjct: 180 ALADDEINHIDKEGNIWEIKYPLKDEEGYLIVATTRPETMLGDTGI 225



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 63/381 (16%), Positives = 124/381 (32%), Gaps = 63/381 (16%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--- 264
            V  +   K + +++   E K  P   +      ++ IRD      I   I+        
Sbjct: 357 FVKMQPLAKRALDVVKNGEVKLTPKRMEKRYYNWLENIRD----WTISRQIWWGHRIPAY 412

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           +   +   +   I+   +      G   P + +T          L   STM   +  R L
Sbjct: 413 YTPNNELIVAKNIEEAKKICVEKFGEELPLREETDVLDTWFSSALWPFSTMGWPEKTRDL 472

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQI 381
            +      YF  DL         G D++I+   +     S +          +  K+   
Sbjct: 473 ER------YFPTDL------LVTG-DDIIFFWVARMIMMSLHF------LDTIPFKEVYF 513

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
             ++       RD +  KMSK  G+      ++D+ GSD+VRF  ++  +         K
Sbjct: 514 TGII-------RDEIGRKMSKSLGNAPDTLAILDKYGSDAVRFSFMYNTSQGQDILFSEK 566

Query: 442 VKEQSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           + E            +     ++   +      DLDF L  + ++   S+   +   +  
Sbjct: 567 LIEMGHTFANKIWNASKFVISNLEGFKEDISILDLDFKLEDQWIL---SKLQLASRNINK 623

Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVF--HGHWSHGRENPRLRF--VQANNRKLT 556
            + EY   I+ +               +A  F  +       E  + R   V  N+    
Sbjct: 624 EMEEYN--IDTSAK-------------IAYEFFRNDFCDWYLEIAKTRIYGVDENDIDRQ 668

Query: 557 MMRLQLVHAVASIINSGLNII 577
             +  L      ++++GL ++
Sbjct: 669 TAQWIL----RHVLDNGLRLL 685


>gi|255722147|ref|XP_002546008.1| hypothetical protein CTRG_00789 [Candida tropicalis MYA-3404]
 gi|240136497|gb|EER36050.1| hypothetical protein CTRG_00789 [Candida tropicalis MYA-3404]
          Length = 508

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 140/438 (31%), Gaps = 68/438 (15%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           L S +    +  R+   + T       + +PTG +H+G  R A+    LA     +G   
Sbjct: 18  LKSSLAELSKQTRSESNQPTAPVRTRFAPSPTGFLHLGSLRTALYNYLLA---KSTGGTF 74

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                  D    +     ++F   +      D    EG   G Y +   K++  K++ EL
Sbjct: 75  ILRIEDTDRTRLVEGAEQNIFDTLKWCKLKVDEGPQEGGAFGPYRQSDRKDIYKKFADEL 134

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           L+          K+  +      +R+  + L    ++              +  +I    
Sbjct: 135 LDKGLAYKCYCSKERLID-----LRESAQKLKPPTNVTYDRKCLGANQSEELPYVI---- 185

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADL 338
                          K     D+   QL  +      D    D  ++K+DG  TY  A++
Sbjct: 186 ---------RFKSPDKYPPFRDLLHGQLNLQPQYNEKDRRYDDFVIVKNDGMPTYHFANV 236

Query: 339 AYFKCKYERGFDNMIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                  +     + +V+ G +      +  A+  A   +  Q        + L      
Sbjct: 237 ------VDDHLMKITHVVRGEEWLPSTPKHIAMYRAFDWEPPQYIH-----IPLLTSLKD 285

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            K+SKR+GD   L+   + +  +++   +          F +  V+E  ++   F    +
Sbjct: 286 KKLSKRSGDLNILKLKDEGILPEALINFVAL--------FGWAPVRENGEKFNEF---MS 334

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
                ++F         +D        +     +  ++L L   L + P+ ++    A  
Sbjct: 335 LDEITNLF--------SVDQLTKGNAKVNDSKLYHFNKLHLTKKLED-PKELDQIVEAYY 385

Query: 518 PYKLAFYLYDLASVFHGH 535
           P+            FH  
Sbjct: 386 PH------------FHEF 391


>gi|170756625|ref|YP_001780726.1| glutamyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229470623|sp|B1IIG7|SYE_CLOBK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|169121837|gb|ACA45673.1| glutamyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 485

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +Y+ +L+   E             
Sbjct: 59  IYNTLKITGLSHDEGP-DIGGPVGPYVQSERRNIYIEYAEKLIEKGEA------------ 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ L  L    +       + +      ++ ID    +G  Y      P + +T
Sbjct: 106 YYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIDKKIAEGVPYVIRQKNPTTGST 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 166 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 218 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 266


>gi|83311902|ref|YP_422166.1| glutamyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|115305750|sp|Q2W3G8|SYE2_MAGMM RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|82946743|dbj|BAE51607.1| Glutamyl- and glutaminyl-tRNA synthetase [Magnetospirillum
           magneticum AMB-1]
          Length = 477

 Score = 43.4 bits (101), Expect = 0.096,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 96/310 (30%), Gaps = 62/310 (20%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              +   + +PTG +H+G  R A+     A                   G +   L +  
Sbjct: 1   MTVVTRFAPSPTGFLHIGGGRTALFNWLFAR----------------HHGGKF-LLRIED 43

Query: 182 FWRYQ------QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             R +      +A+++    L   +     ++        + + +LL+          + 
Sbjct: 44  TDRARSTDAAVEAIFDGIKWLGLDWDGEAVMQFARACRHAEVARQLLDEG-----KAYRC 98

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           Y  Q  +  IR++ KA            D    D       +  L             P 
Sbjct: 99  YCTQDELTAIREEQKAKGQPMRYPGIWRDRPATDAPEGAPFVVRLKA-----------PA 147

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              T   D+ +  +   +  +    D  LL++DG+ TY  + +      ++ G  ++I  
Sbjct: 148 EGETIIADLVQGDVRVANDQLD---DMVLLRADGTPTYMLSVV---VDDHDMGITHVIR- 200

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G DH     R   +  A   +           + L       K+SKR G          
Sbjct: 201 -GDDHLTNAFRQYQLYKACGWEVPTFAH-----IPLIHGPDGAKLSKRHG---------- 244

Query: 416 EVGSDSVRFM 425
            +G D+ R M
Sbjct: 245 ALGVDAYRDM 254


>gi|291542091|emb|CBL15201.1| valyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 897

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 51/200 (25%), Gaps = 41/200 (20%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS     +    + G  +   +        I     N TG +H+GH     + D L   
Sbjct: 10  NPSEFEDRIYDFWLKGNYFHAEVDKDKKPYTIVMPPPNITGQLHMGHALDETLQDILIRW 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212
               GY                    S  W                  PG     +  E 
Sbjct: 70  RRMQGY--------------------SALW-----------------LPGTDHASIATEA 92

Query: 213 -LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKALNIQHDIFISEDDFHRGD 269
            + +    E +   +      +K       +   R    LK L    D          G 
Sbjct: 93  KIVEAMRKEGITKEDIGREEFLKRAWEWKKVYGGRITSQLKKLGSSCDWERERFTMDEGC 152

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              ++++   L   G +Y G
Sbjct: 153 SKAVKEVFVRLYNDGKIYRG 172


>gi|269958693|ref|YP_003328480.1| glutamyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848522|gb|ACZ49166.1| glutamyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 479

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 89/310 (28%), Gaps = 56/310 (18%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +   + G      I   + +PTG +H+G  R A+     A                   G
Sbjct: 4   HPAWVCGAEIVRVITRFAPSPTGSLHLGGARTALFNWLFARR----------------HG 47

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q          R +       S+          ++ +           ++     +   
Sbjct: 48  GQF-------LLRMEDTDQERSSETVAQSI----IEDMAWLGLHHDRDVVIQSARRERHT 96

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF------HRGDPSPIRDIIDNLARQGY 285
            V             ++L A    +  + SE D       H  +    R    +     +
Sbjct: 97  QVA------------EELLARGKAYYCYCSEYDIAAEKLRHENEGKHYRHHCPS-RDANH 143

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKC 343
              G     + K+ +  ++     ++    V  +   D  +L+S+G  TY    LA    
Sbjct: 144 AQSGTAGVLRLKSPENREIKFTDGVYGEISVSSEQIDDMVILRSNGHPTYL---LAVVVD 200

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            ++    ++I   GSDH     +   +A A+     Q   +    +     G  +    R
Sbjct: 201 DHDMCITHIIR--GSDHITNTIKQMLLAEAMGWDNPQFCHI---PLIHDEGGAKLSKRNR 255

Query: 404 AGDFITLRHV 413
           A      R +
Sbjct: 256 APGVHEYREL 265


>gi|227827596|ref|YP_002829376.1| valyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584800|ref|YP_002843302.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238619754|ref|YP_002914580.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|227459392|gb|ACP38078.1| valyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019850|gb|ACP55257.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238380824|gb|ACR41912.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 842

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYL 206
                GY V           Q     L V +R       +Q       +  E       +
Sbjct: 109 FKRLEGYNVL---LPQGWDTQGLPTELKVQYRLGIPKDNRQLFLQKCIEWTEDMIK--KM 163

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           K     L   Y  E   F  + + P  +    ++++ + + +L
Sbjct: 164 KEAMIRLG--YRPEWERFEYKTYEPKYRKIIQKSLIDMYKTNL 204



 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L     +   F + 
Sbjct: 556 FTTVLIHGQVLGPDGT--RMSKSKGNVVSPLDRVDEFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|217967659|ref|YP_002353165.1| glutamyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336758|gb|ACK42551.1| glutamyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 477

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 45/282 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG +HVG    A+     A      G  + R   I D       LA S    Y++
Sbjct: 8   IAPSPTGYLHVGTAHTALFNWLFAR--HNKGTFILR---IED-----TDLARSTKE-YEE 56

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +      L   +  G Y +    +L  KY+ ELL     K L      + + + +  ++
Sbjct: 57  NIIEGLKWLGLYWDEGPYYQTQRLDLYRKYADELL----RKGLAYYCYCTPEELEERRKE 112

Query: 248 DLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            L         +  +++S+++  R +    +  I  L  +G                  D
Sbjct: 113 ALAQKKPPKYDRKCLYLSDEERARYEREGRKPAIRLLVPEGKTVFN-------------D 159

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + R ++ F +  +GD     ++KSDG  TY   + A     Y  G  ++I   G DH   
Sbjct: 160 IIRGEIEFNNEDIGDF---VIMKSDGIPTY---NFAVVIDDYTMGITHVIR--GEDHISN 211

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             +   +  A      +        + L       K+SKR G
Sbjct: 212 TPKQLFIYQAFGWSPPEFAH-----LPLLLGPDRSKLSKRHG 248


>gi|154250743|ref|YP_001411567.1| isoleucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154154693|gb|ABS61910.1| isoleucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 965

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +     +     VL         D    KMSK  G+ I  +
Sbjct: 593 LYLEGSDQHRGWFQSSLLESCGTRGRAPYKQVLTHGFTM---DEKGRKMSKSLGNVIAPQ 649

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            +V++ G+D +R  +      E  +     +K   +         AY + R+ FR    +
Sbjct: 650 KIVEQNGADILRLWVASTDYWEDHNIGNEIIKSNVE---------AYRKLRNTFRYL--L 698

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS- 530
                FD   R  +    E    E  ++  LAE   ++  A    +  ++    + L++ 
Sbjct: 699 GNLAGFDEAERVAVADMPEL---ERSILHRLAELDDLVRKAYADYDFKRVT---HTLSNF 752

Query: 531 ---VFHGHWSHGREN 542
                   +   R++
Sbjct: 753 MNVDLSAFYFDIRKD 767


>gi|86147554|ref|ZP_01065864.1| valyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834593|gb|EAQ52741.1| valyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 957

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYKTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++    I   L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESG-GTITQQLRRLGASVDWDRERFTMDDGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 152 ATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|332245944|ref|XP_003272111.1| PREDICTED: valyl-tRNA synthetase, mitochondrial isoform 2 [Nomascus
           leucogenys]
          Length = 1097

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 53/198 (26%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 138 YVEAAWYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 197

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 198 RWHRMRG---------------------------DQVLWVPGSDHAGIATQAVVEK---- 226

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +A    I + L+AL    D          G   
Sbjct: 227 QLWKERGVRRHELSREAFLREVWHWK-EAKGGEICEQLRALGASLDWDRECFTMDVGSSV 285

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L + G +Y  
Sbjct: 286 AVTEAFVRLYKAGLLYRN 303


>gi|332245942|ref|XP_003272110.1| PREDICTED: valyl-tRNA synthetase, mitochondrial isoform 1 [Nomascus
           leucogenys]
          Length = 1049

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 53/198 (26%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                            Q L+   SD        V  K    
Sbjct: 168 RWHRMRG---------------------------DQVLWVPGSDHAGIATQAVVEK---- 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +A    I + L+AL    D          G   
Sbjct: 197 QLWKERGVRRHELSREAFLREVWHWK-EAKGGEICEQLRALGASLDWDRECFTMDVGSSV 255

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L + G +Y  
Sbjct: 256 AVTEAFVRLYKAGLLYRN 273


>gi|254779703|ref|YP_003057809.1| valyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001615|emb|CAX29717.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Helicobacter
           pylori B38]
          Length = 874

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 101/321 (31%), Gaps = 42/321 (13%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  K  +  +     N TG +H+GH     + D L       GY+   +  ++ 
Sbjct: 31  IDGNEKIQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDH 90

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D           ++K V  E  +K    +L   +   
Sbjct: 91  AG--IATQNVVEKQLLSQGIKKEDLG------REEFIKKV-WEWKEKSGGAILEQMKRLG 141

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 142 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDGALSDIEVEYEERK 201

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLA 339
           G +Y         K        R + LF  + +     D+  + L+            + 
Sbjct: 202 GALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKAILPLINRTIP 261

Query: 340 YFKC------------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                           K   G D   Y +G  H          A  + ++K  +N    E
Sbjct: 262 IIADEHVEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EAIKIFDEKGILNAHCGE 314

Query: 388 LVRL----YRDGMPIKMSKRA 404
              L     R  +  K+ + A
Sbjct: 315 FENLERLEARGKVVEKLKENA 335


>gi|227830284|ref|YP_002832064.1| valyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579109|ref|YP_002837507.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|227456732|gb|ACP35419.1| valyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228009823|gb|ACP45585.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 842

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYL 206
                GY V           Q     L V +R       +Q       +  E       +
Sbjct: 109 FKRLEGYNVL---LPQGWDTQGLPTELKVQYRLGIPKDNRQLFLQKCIEWTEDMIK--KM 163

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           K     L   Y  E   F  + + P  +    ++++ + + +L
Sbjct: 164 KEAMIRLG--YRPEWERFEYKTYEPKYRKIIQKSLIDMYKTNL 204



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L     +   F + 
Sbjct: 556 FTTVLIHGQVLGPDGT--RMSKSKGNVVSPLDRVDEFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|218710652|ref|YP_002418273.1| valyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218323671|emb|CAV19986.1| Valyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 957

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYKTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++    I   L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESG-GTITQQLRRLGASVDWDRERFTMDDGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 152 ATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|84387837|ref|ZP_00990852.1| valyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377352|gb|EAP94220.1| valyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 957

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYKTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++    I   L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESG-GTITQQLRRLGASVDWDRERFTMDDGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 152 ATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|71402226|ref|XP_804052.1| valyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866808|gb|EAN82201.1| valyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 413

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 50/199 (25%), Gaps = 35/199 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
                +       SG     + +     G    I     N TG +H+GH     V DTL 
Sbjct: 15  KDVESEWYEWWEKSGFFRPASDLGRKHNGNTFVIVSPPPNVTGYLHLGHSLTGAVQDTLI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + AG     +                               V K
Sbjct: 75  RFHRMKGDNTLYVPGTDHAGIATQVV-------------------------------VEK 103

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L  +      +   E++L  V D+  +    +I   L+ + +  D              
Sbjct: 104 RLLRESGKTRHDLGREEFLKRVWDFK-ENHAHVITRQLRQIGLSLDWTRERFTMDDHCAG 162

Query: 272 PIRDIIDNLARQGYVYEGI 290
            + +    +   G V+   
Sbjct: 163 AVLEAFVKMHEDGLVHRST 181


>gi|68492345|ref|XP_710060.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
 gi|46431161|gb|EAK90784.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
          Length = 1119

 Score = 43.4 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+                   I K    +I     N TG +H+GH     + DTL     
Sbjct: 167 SWYSWWEKQGFFEPELTANGEIKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNR 226

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W  +Q   ++        Y          E  +
Sbjct: 227 MQGKTTLFIPGFDHAGIATQSVVEKQIWAKEQKTRHD--------YGREKFIEKVWEWKE 278

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y                           I++  K L   +D    +   +      + +
Sbjct: 279 EYHQR------------------------IKNQFKKLGSSYDWSREKFTLNPDLSQAVTE 314

Query: 276 IIDNLARQGYVYEG 289
               +   G +Y  
Sbjct: 315 AFVRMHEDGTIYRA 328


>gi|323477379|gb|ADX82617.1| valyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 842

 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYL 206
                GY V           Q     L V +R       +Q       +  E       +
Sbjct: 109 FKRLEGYNVL---LPQGWDTQGLPTELKVQYRLGIPKDNRQLFLQKCIEWTEDMIK--KM 163

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           K     L   Y  E   F  + + P  +    ++++ + + +L
Sbjct: 164 KEAMIRLG--YRPEWERFEYKTYEPKYRKIIQKSLIDMYKTNL 204



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L     +   F + 
Sbjct: 556 FTTVLIHGQVLGPDGT--RMSKSKGNVVSPLDRVDEFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|315637191|ref|ZP_07892413.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315478558|gb|EFU69269.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 650

 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 97/332 (29%), Gaps = 61/332 (18%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D LA     +G      + +         +A S   R +      D ++
Sbjct: 22  HIGHAYTTIIADMLARYSRLTGSNT---FLLTGTDEHGQKIAQSAEIRNKTPKEYAD-EI 77

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN-IQ 255
              +        +  +   + + E      +K   I+          I + + +    + 
Sbjct: 78  SGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKG-----DIYKGEYEGFYCVP 132

Query: 256 HDIFISEDDF--------------------HRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + F  E                       +  + S   + +     +          P+
Sbjct: 133 CETFFPESQLVDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKWYEENE----DCILPR 188

Query: 296 SKTTQKCDMDRKQL-------------LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           SK  +  +  +  L             +     + +      +  D    Y  A L Y  
Sbjct: 189 SKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALLNYITA-LGYGT 247

Query: 343 CKYERGF-DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                 F    I+++G D    HS Y     A   ++     +    +       RDG  
Sbjct: 248 DDKNMNFWPANIHLVGKDILRFHSIY---WPAFLMSLDLPLPK---HIAAHGWWTRDGE- 300

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            KMSK  G+ +  + V D  G D+ R+ ML  
Sbjct: 301 -KMSKSKGNIVNPKEVADAYGLDAFRYFMLRE 331


>gi|51598852|ref|YP_073040.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
 gi|61216166|sp|Q660S3|SYC_BORGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51573423|gb|AAU07448.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 480

 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 120/337 (35%), Gaps = 43/337 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 G+ +  + K   + +  +        P++  +      ++  ++KI+ +     
Sbjct: 85  KTAREKGLTVYEISKFFTEAFFKDCKKLNVVYPDKVLIASKHIPNMIEVIKILEEKKFTY 144

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +++     F         D+ID      +    I    ++KT          L F 
Sbjct: 145 FSNGNVYFDTSCFKSYGEMAGIDLID--KDMAFSRVDIDKFKRNKTDFV-------LWFT 195

Query: 313 STMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--YVKR 366
           ++   D     D P       + Y +  L       E   D + I++ G DH G  ++  
Sbjct: 196 NSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHHINE 250

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFM 425
           +  V   +++K   I V    L+  Y      KMSK  G+FIT++ + ++       R++
Sbjct: 251 IAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSHGNFITVKGLEEQNFSPLDFRYL 305

Query: 426 MLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAYAR 460
            L       L F F   K  + ++EN +  + Y YA 
Sbjct: 306 CLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYAS 342


>gi|30249136|ref|NP_841206.1| isoleucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|81436203|sp|Q820M6|SYI_NITEU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30180455|emb|CAD85060.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 939

 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 15/137 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +       A+        +L    V    DG   KMSK  G+ I  +
Sbjct: 567 LYLEGSDQHRGWFQSSLLTGCAIDGCAPYTALLTHGFVV---DGQGYKMSKSKGNVIAPQ 623

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + D +G+D +R  +     S  L      +K   +          Y R R+  R     
Sbjct: 624 KIADTLGADILRLWVASTDYSGELSISDEILKRTVE---------TYRRIRNTLRFLLAN 674

Query: 472 FPDLDFDLFPRNVIPQE 488
               DF+L    + P E
Sbjct: 675 L--ADFNLAADALPPAE 689


>gi|15645767|ref|NP_207944.1| valyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501065|sp|P56000|SYV_HELPY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2314306|gb|AAD08195.1| valyl-tRNA synthetase (valS) [Helicobacter pylori 26695]
          Length = 874

 Score = 43.4 bits (101), Expect = 0.098,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 100/315 (31%), Gaps = 48/315 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 40  KNKRFCLMMPPPNVTGVLHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 97

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D           ++K V  E  +K    +L   +   +      + 
Sbjct: 98  VVEKQLLSQGIKKEDLG------REEFIKKV-WEWKEKSGGAILEQMKRLGVSAAFSRTR 150

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 151 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 210

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGSYTYFAAD-- 337
               K        R + LF  + +             G     PL+          AD  
Sbjct: 211 LENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKAILPLIH---RTIPIIADEH 267

Query: 338 ----LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL-- 391
                     K   G D   Y +G  H     ++        ++K  +N    E   L  
Sbjct: 268 VEMEFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGEFENLER 320

Query: 392 --YRDGMPIKMSKRA 404
              RD +  ++ + A
Sbjct: 321 LEARDKVVERLKENA 335


>gi|328955636|ref|YP_004372969.1| leucyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455960|gb|AEB07154.1| leucyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 860

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
               + K    I      +  N      K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 15  DAGRIEKKWMRIWDDENLFALNENSARPKRYVLEMFPYPSGDLHMGHVRNYTIGDAMARA 74

Query: 154 MAFSGYEV 161
               G++V
Sbjct: 75  ARMRGFDV 82



 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 16/163 (9%)

Query: 354 YVMGSDH-------SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           YV G +H       S +  +       +   +   N+L   +V   +D     MSK  G+
Sbjct: 564 YVGGIEHAILHLLYSRFFTKALRDIGLLDIDEPFENLLTQGMV---KDEHGEVMSKSVGN 620

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    V++  G+D++R  +L+   SE  DF +      + E    +++ A+     + R
Sbjct: 621 VIAPATVIEPYGADTLRLAILFIAPSEK-DFSWD---ANAVEGANRFLRRAWRVVWRLSR 676

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQLIVHLAEYPR 507
            A +           ++ +   +     E    +    A++ R
Sbjct: 677 DAGEDALSATCSSLDKSSLDDAALALLRERHRAIAKCTADFDR 719


>gi|313124236|ref|YP_004034495.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280799|gb|ADQ61518.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325685746|gb|EGD27823.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 804

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 104/313 (33%), Gaps = 52/313 (16%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQH--DIFISE----DDFHRGDPSPIRDIIDNL 280
           E+    + D+  +  +   + + K  +       +  E      +  G+ + + +  D L
Sbjct: 387 EEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPE--DEL 444

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +      I P    ++      D   ++  +   G      + +  GS  YF   +  
Sbjct: 445 PLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWAGSSWYFLRYIDP 504

Query: 341 FKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELV 389
              K     + +       +Y+ G++H+     Y +    V   +     +         
Sbjct: 505 HNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTK-----EPFQ 559

Query: 390 RLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKE 444
           +LY  G+      KMSK  G+ +    V+DE G+DS+R + M     +  +D+D      
Sbjct: 560 KLYNQGLILKNHEKMSKSRGNVVNPDDVIDEYGADSLRTYEMFMGPLNASIDWD------ 613

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
              +N             S  ++  D       +    + IP E   D ++ +L      
Sbjct: 614 ---DNGP-----------SGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKI--- 656

Query: 505 YPRVIENATIAQE 517
           Y   ++  T   E
Sbjct: 657 YNETVKTVTEHFE 669


>gi|310816538|ref|YP_003964502.1| glutamyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755273|gb|ADO43202.1| glutamyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 468

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 87/290 (30%), Gaps = 41/290 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A                     Q     L +
Sbjct: 5   KPVVTRFAPSPTGALHIGGARTALFNWLFAR-------------------NQGGKFLLRI 45

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               +      ++         + +   G+ +     +        + L   K Y   + 
Sbjct: 46  EDTDRARSTPENTAEILAGLTWLGIDWDGEPIHQFERAPRHAEVARELLAQDKAYKCFST 105

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            + I    +    +    +    +     S   D+        +V     P   ++T   
Sbjct: 106 QEEIEAFREKARAEGTSTLFRSPWRDVPSSQHPDL-------PFVIRIKAPQTGAQTVHD 158

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
                  +   S    DD+   +L+SDG+  Y    LA     ++ G  ++I   G DH 
Sbjct: 159 AVQGDVTV---SNEQMDDM--VMLRSDGTPVYM---LAVVVDDHDMGVTHVIR--GDDHL 208

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               R + +  A+        V+    +    DG   K+SKR G      
Sbjct: 209 NNAFRQKMIYDAMGWD---FPVMAHIPLIFGPDGK--KLSKRHGATAASE 253


>gi|300744321|ref|ZP_07073340.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380046|gb|EFJ76610.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
          Length = 476

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 113/328 (34%), Gaps = 48/328 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I +  A   G  HVGH R A+V D LA  M + G++VT    + D   +I  LA SV  
Sbjct: 25  RIYYCGATVQGEPHVGHIRSALVFDQLARWMRYRGFKVTTVRNVTDIDDKI--LAKSV-- 80

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL--PIVKDYS---V 238
                      +  +  Y G +       LA +Y            +  P  +  +   +
Sbjct: 81  -----------ESAQPTYTGEHPNEQWWALAYRYEKVFARAYATLGIDPPTYEPRATGHI 129

Query: 239 QAMMKIIRDD------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             M ++I+          AL+   D++     + +      R  +D++            
Sbjct: 130 PEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGA-LTRQSVDDMQDSADADPRGKR 188

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFD 350
            P+     K   + + L           D P  +    +    + +A  Y   +++    
Sbjct: 189 DPRDFALWKGYKEGEPLT-------AAWDSPWGRGRPGWHLECSAMAGKYLGKRFD---- 237

Query: 351 NMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I+  G D    + +   A + A  +  A   +       +  +G   KMSK  G+ I+
Sbjct: 238 --IHGGGLDLRFPHHENELAQSTAAGDDFANFWMHNG---MVTYEGE--KMSKSIGNTIS 290

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDF 437
              ++ +     VR+ +       +LD+
Sbjct: 291 PVQMLQQARPLVVRYYLGSAHYRSVLDY 318


>gi|296122317|ref|YP_003630095.1| valyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296014657|gb|ADG67896.1| valyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 998

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 57/238 (23%), Gaps = 32/238 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     S   S   Y  +         I     N TG +H+GH     + D +    
Sbjct: 11  PQSIESHWISFWESHGYYNADPSETKPPHVIMIPLPNVTGALHMGHALNGTLQDLITRWR 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    ++         +     +  L         L     +  
Sbjct: 71  RMQGYSALWMPGTDHAGIATQSMV--------EKRMLEEEGLTRHDVGREALIERIWKWK 122

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D Y + +L                          LK L    D   +           +R
Sbjct: 123 DHYEARILGQ------------------------LKRLGASCDWRRTRFTLDEVCSQAVR 158

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
                + R G +Y G          Q    D +             + P++   G  T
Sbjct: 159 RTFFKMFRDGLIYRGQRLVNWDAFLQTAVADDEVYTEDIDGQFWTFNYPVVDDQGEPT 216


>gi|84502708|ref|ZP_01000827.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389103|gb|EAQ01901.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 1065

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 345 YERGFDNMIYVMGSDHSGYV--KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            ++ F   + V G D   +    R+  +  AV  +K   +V L  LV   RD    KMSK
Sbjct: 658 MKKYFPTSVLVTGQD-ILFFWVARMMMMQLAVVGEKPFSDVYLHGLV---RDAKGKKMSK 713

Query: 403 RAGDFITLRHVVDEVGSDSVRFM 425
             G+ I    ++DE G+D++RF 
Sbjct: 714 TVGNVIDPLEIIDEYGADALRFA 736


>gi|84388057|ref|ZP_00990953.1| glutamyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377124|gb|EAP93994.1| glutamyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 475

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 93/280 (33%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR  
Sbjct: 61  MQWMGMEWDEGPYYQSKRFDRYNEMVDKL------LAEDKAFKC---YASKELLDEIRA- 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
                    +     +  R D +  + +  N A + G         PK  +    D  R 
Sbjct: 111 ---------VQEENKEMARYDANHPKIVAANEAAKEGDACVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEIANSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|254190884|ref|ZP_04897391.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938559|gb|EDO94229.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 945

 Score = 43.4 bits (101), Expect = 0.099,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 39/264 (14%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDD 319
           + H      + ++   + RQG      L   +    +    + + D   + F S      
Sbjct: 503 ELHPRTLELLEEVAKRVERQGIEAWQTLDARELIGDEANLYEKNRDTLDVWFDS------ 556

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
                    G+  +        K + +   D  +Y+ GSD   G+       A+ +  + 
Sbjct: 557 ---------GTTHWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRA 604

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L         DG   KMSK  G+ I    V + +G++ +R  +     S  L   
Sbjct: 605 PYKGLLTHGF---TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAIS 661

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
              +K  ++          Y R R+  R       D D+         Q  E D   +  
Sbjct: 662 EEILKRVTEG---------YRRIRNTLRFLLANLSDFDYAKDALPA-GQWLEIDRYAVAF 711

Query: 499 IVHLAEYPRVIENATIAQEPYKLA 522
              L     ++ +     E + + 
Sbjct: 712 AAQLQA--ELLAH-YEKYEFHPVV 732


>gi|330836491|ref|YP_004411132.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748394|gb|AEC01750.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 1044

 Score = 43.4 bits (101), Expect = 0.100,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCE 387
           G   Y   +  YF+  +   F   I   G D   G+   L  +AAA+ EK A +N ++  
Sbjct: 532 GELHYPFENKEYFETHFPADF---INE-GLDQTRGWFYTLTIIAAALFEKPAFLNCIVNG 587

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           ++ L  DG   KMSK   ++     +V + G+D++RF ++    +   D  F +  
Sbjct: 588 II-LAADGK--KMSKSEHNYTDPMEIVKQYGADALRFSLMNSNVTHADDLKFSEDS 640


>gi|326404350|ref|YP_004284432.1| glutamyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051212|dbj|BAJ81550.1| glutamyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 466

 Score = 43.4 bits (101), Expect = 0.100,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 46/282 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A                   G Q     L V    ++ 
Sbjct: 8   APSPTGMLHIGGARTALFNYLFAR----------------HHGGQF---LLRVEDTDRER 48

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV---QAMMKII 245
                + +       + LK     +             E+ L   + Y     +  +  +
Sbjct: 49  STPEATKVILDALDWLDLKPDEPPVYQSTRYARHREVAEQMLAAGQAYRCYCSREELAEM 108

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R + +             D    +     D +  L             P+   T   D+ 
Sbjct: 109 RAEAERSKKPFRYDGRWRDRDPAEAPAGVDPVIRLRA-----------PREGETVIHDLV 157

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + ++  ++  +    D  LL+SDG+ TY     A     ++ G  ++I   G DH     
Sbjct: 158 QGEVRVKNAELD---DMILLRSDGTPTYLH---AVVVDDHDMGITHVIR--GDDHLTNTF 209

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           R   +  A+   +          + L       K+SKR G  
Sbjct: 210 RQAQIYDAMGWARPNFAH-----IPLIHGADGAKLSKRHGAV 246


>gi|323474647|gb|ADX85253.1| valyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 842

 Score = 43.4 bits (101), Expect = 0.100,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYL 206
                GY V           Q     L V +R       +Q       +  E       +
Sbjct: 109 FKRLEGYNVL---LPQGWDTQGLPTELKVQYRLGIPKDNRQLFLQKCIEWTEDMIK--KM 163

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           K     L   Y  E   F  + + P  +    ++++ + + +L
Sbjct: 164 KEAMIRLG--YRPEWERFEYKTYEPKYRKIIQKSLIDMYKTNL 204



 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L     +   F + 
Sbjct: 556 FTTVLIHGQVLGPDGT--RMSKSKGNVVSPLDRVDEFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|229582150|ref|YP_002840549.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012866|gb|ACP48627.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 842

 Score = 43.4 bits (101), Expect = 0.100,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYL 206
                GY V           Q     L V +R       +Q       +  E       +
Sbjct: 109 FKRLEGYNVL---LPQGWDTQGLPTELKVQYRLGIPKDNRQLFLQKCIEWTEDMIK--KM 163

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           K     L   Y  E   F  + + P  +    ++++ + + +L
Sbjct: 164 KEAMIRLG--YRPEWERFEYKTYEPKYRKIIQKSLIDMYKTNL 204



 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L     +   F + 
Sbjct: 556 FTTVLIHGQVLGPDGT--RMSKSKGNVVSPLDRVDEFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|68492340|ref|XP_710062.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
 gi|46431164|gb|EAK90786.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
          Length = 1119

 Score = 43.4 bits (101), Expect = 0.100,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+                   I K    +I     N TG +H+GH     + DTL     
Sbjct: 167 SWYSWWEKQGFFEPELTANGEIKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNR 226

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W  +Q   ++        Y          E  +
Sbjct: 227 MQGKTTLFIPGFDHAGIATQSVVEKQIWAKEQKTRHD--------YGREKFIEKVWEWKE 278

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y                           I++  K L   +D    +   +      + +
Sbjct: 279 EYHQR------------------------IKNQFKKLGSSYDWSREKFTLNPDLSQAVTE 314

Query: 276 IIDNLARQGYVYEG 289
               +   G +Y  
Sbjct: 315 AFVRMHEDGTIYRA 328


>gi|329956675|ref|ZP_08297248.1| glutamate--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524047|gb|EGF51123.1| glutamate--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 508

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 93/279 (33%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRVEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL+  +  ++       + A    I   
Sbjct: 68  GILFDEGVSFGGEHGPYRQSERREIYKKYVQVLLDAGK-AYIAFDTPEELDAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L  +G  Y        ++     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLSKEEVDTLIAEGKQYVVRFKIEPNEDVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSVLD---DKVLYKSADELPTYH---LANIVDDHLMKVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|319939574|ref|ZP_08013933.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811163|gb|EFW07469.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 679

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 112/347 (32%), Gaps = 72/347 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A             
Sbjct: 29  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAEEA---------- 78

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +   + + +  +LL+   +K++    DY  + +  +    L  
Sbjct: 79  -------GIIPQAYVDSMAVGVKELW--KLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 129

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S  D      S + ++  + + +   G    G      S+ +    + 
Sbjct: 130 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLG 189

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYF--------AADLAYFKCKYERG------FDN 351
           +        +         ++ DG               DLA  +  +  G        +
Sbjct: 190 KYADRL---VEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVPVPSNPKH 246

Query: 352 MIYVM-----------GSDHSGY--VKRLE---AVAAAVSEKKAQINVLLCELVRLYRDG 395
           ++YV            G     +   ++      V   V +   + + +   ++ +  D 
Sbjct: 247 VVYVWIDALLNYATVLGYGQDDHANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDM 306

Query: 396 M--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                            KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 307 KLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 353


>gi|163853584|ref|YP_001641627.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665189|gb|ABY32556.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 522

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 115/406 (28%), Gaps = 46/406 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G +I   A       +  + +
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQTASRAGVTPRAFVDD 79

Query: 192 NDSDLPEGYYPGV--YLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIR 246
                          Y + +    AD Y++             + + K     ++     
Sbjct: 80  MAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAGWYSVRDEAY 139

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            D     +  D             ++ E+++          ++   A Q       L P 
Sbjct: 140 YDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLYAEQ----PDFLGPE 195

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--- 351
                    +         +    D   P+    G   Y   D A        GF +   
Sbjct: 196 TRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVD-ALTNYLTVTGFPDAQA 254

Query: 352 --------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                    ++++G D    + R  AV   A  +S        +      L R     KM
Sbjct: 255 PNARFWPASLHIIGKD----IVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG---EKM 307

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQ-YAY 458
           SK  G+ +    +V   G D VR+ +L         ++D   +  +   +    +   A 
Sbjct: 308 SKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGNLAQ 367

Query: 459 ARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLA 503
                I +  +   P+   F      ++            L+ +LA
Sbjct: 368 RSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLA 413


>gi|149185096|ref|ZP_01863413.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831207|gb|EDL49641.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 837

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 92  YLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P+    +  S+   +      +   K     +E     P+G +H+GH R   +GD L
Sbjct: 5   RFDPASADARWQSAWDEAQTFRADSNSDKPKSYVLEMF-PYPSGRIHIGHVRNYTMGDVL 63

Query: 151 ASLMAFSGYEV 161
           A     +G+EV
Sbjct: 64  ARYKKATGHEV 74



 Score = 38.0 bits (87), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           +L +       G  IKMSK   + +    ++D  G+D+VR+ ML     E
Sbjct: 598 VLKDDGGEVEIGRVIKMSKSKKNVVDPDTIIDTYGADAVRWFMLSDSPPE 647


>gi|311112938|ref|YP_003984160.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944432|gb|ADP40726.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 474

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 113/328 (34%), Gaps = 48/328 (14%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I +  A   G  HVGH R A+V D LA  M + G++VT    + D   +I  LA SV  
Sbjct: 23  RIYYCGATVQGEPHVGHIRSALVFDQLARWMRYRGFKVTTVRNVTDIDDKI--LAKSV-- 78

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL--PIVKDYS---V 238
                      +  +  Y G +       LA +Y            +  P  +  +   +
Sbjct: 79  -----------ESAQPTYTGEHPNEQWWALAYRYEKVFARAYATLGIDPPTYEPRATGHI 127

Query: 239 QAMMKIIRDD------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
             M ++I+          AL+   D++     + +      R  +D++            
Sbjct: 128 PEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGA-LTRQSVDDMQDSADADPRGKR 186

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFD 350
            P+     K   + + L           D P  +    +    + +A  Y   +++    
Sbjct: 187 DPRDFALWKGYKEGEPLT-------AAWDSPWGRGRPGWHLECSAMAGKYLGKRFD---- 235

Query: 351 NMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I+  G D    + +   A + A  +  A   +       +  +G   KMSK  G+ I+
Sbjct: 236 --IHGGGLDLRFPHHENELAQSTAAGDDFANFWMHNG---MVTYEGE--KMSKSIGNTIS 288

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDF 437
              ++ +     VR+ +       +LD+
Sbjct: 289 PVQMLQQARPLVVRYYLGSAHYRSVLDY 316


>gi|222150239|ref|YP_002551196.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254782480|sp|B9JV46|SYL_AGRVS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221737221|gb|ACM38184.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 876

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +       + I    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQEKWSEAKIFETDNNDPREKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|195066025|ref|XP_001996766.1| GH24997 [Drosophila grimshawi]
 gi|193896621|gb|EDV95487.1| GH24997 [Drosophila grimshawi]
          Length = 1046

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 58/219 (26%), Gaps = 39/219 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP Y+     S       +                K  +     N TG +H+GH     +
Sbjct: 92  SPRYVEAQWYSWWEKQGFFTPEYGRDSIDAPNPNGKFIMVIPPPNVTGSLHLGHALTNAI 151

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D +       G         + AG     +   + WR ++                   
Sbjct: 152 EDAITRYNRMKGRTTLWVPGCDHAGIATQVVVEKLLWREERL------------------ 193

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                           +   EK++  + ++  +   + I D LKAL   +D         
Sbjct: 194 -------------SRHDLGREKFIERIWNWRREKGGR-IYDQLKALGSSYDWTRVNFTMD 239

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                 + +    L  +G +Y        S T +    D
Sbjct: 240 PKLCRAVTEAFVRLHEKGAIYRSSRLVNWSCTLRSAISD 278


>gi|163787628|ref|ZP_02182075.1| hypothetical protein FBALC1_03777 [Flavobacteriales bacterium
           ALC-1]
 gi|159877516|gb|EDP71573.1| hypothetical protein FBALC1_03777 [Flavobacteriales bacterium
           ALC-1]
          Length = 877

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 63/240 (26%), Gaps = 38/240 (15%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
                         Y  +   +     I     N TG +H+GH     + D L       
Sbjct: 16  WYDYWMQH-----NYFHSTPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLL 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G                           + A +   +D          +  +  +  DK 
Sbjct: 71  G---------------------------KNACWVPGTDHASIATEAKVVAKLKAQGIDKN 103

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                +   E++L    D+  +    +I + LK L    D   ++          +  + 
Sbjct: 104 -----DLSREEFLKHAWDW-TEEYGGVILEQLKKLGCSCDWDRTKFTMDDDMSEAVIKVF 157

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            +L  +G +Y G          +    D + +      +   ++  +  SD   T     
Sbjct: 158 VDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIHVEKQGLLYYLEYKVEGSDDKLTIATTR 217


>gi|123478986|ref|XP_001322653.1| Valyl tRNA Synthetase [Trichomonas vaginalis G3]
 gi|121905503|gb|EAY10430.1| Valyl tRNA Synthetase, putative [Trichomonas vaginalis G3]
          Length = 316

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     S   +   +      K   + +     N TG +H+GH   A + D +   
Sbjct: 54  NPMKVENAWYSWWENQNFFEPKAADKKFVMIL--PPPNVTGELHLGHALTASIEDAITRY 111

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E       + AG       ++  +R ++ +Y+    L  G Y   Y      + 
Sbjct: 112 HRMCGEESLWVPGTDHAG-------IATQFRVEKKIYDEK-KLHRGEYSREYFLEEAHKW 163

Query: 214 AD 215
            +
Sbjct: 164 VE 165


>gi|33326393|gb|AAQ08614.1| Leusyl-tRNA synthetase [Agrobacterium vitis]
          Length = 878

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +       + I    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQEKWSEAKIFETDNNDPREKYYVLEMF-PYPSGRIHIGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|332160134|ref|YP_004296711.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664364|gb|ADZ41008.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859702|emb|CBX70038.1| valyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 965

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|325123256|gb|ADY82779.1| valyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 965

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 57/208 (27%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMG- 77

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                                     +  L+   +D        V  + +G +   ++  
Sbjct: 78  --------------------------KNTLWQPGTDHAGIATQMVVERQLGLQGITRHDL 111

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 112 GREKFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 62/457 (13%), Positives = 133/457 (29%), Gaps = 99/457 (21%)

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLP 231
            +A +    +   +   D   P G   GV ++              +   +   ++  + 
Sbjct: 350 LVAQAEAEGWLDQIQPYDLKAPRGDRSGVIIEPLLTDQWYVKIAPLAEPAIEAVQDGRIK 409

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYE 288
            V +      M  +R D++   I   ++        +       +    + +  +  +  
Sbjct: 410 FVPEQYSNMYMAWMR-DIQDWCISRQLWWGHRIPAWYDANGNIYVGRNEEEVRAKNNIAA 468

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
            +                  L   ST+      +    +D   T+   D+         G
Sbjct: 469 YVELKQDEDVLDTWFSS--ALWTFSTLGWTGDAQKDAANDFLKTFHPTDV------LVTG 520

Query: 349 FDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           FD +I+   +     + +  + E  ++ V  K   ++        L RDG   KMSK  G
Sbjct: 521 FD-IIFFWVARMIMMTLHFMKNEDGSSQVPFKTVYVH-------GLVRDGEGQKMSKSKG 572

Query: 406 DFITLRHVVDEV-------------------------------------GSDSVRFMMLW 428
           + +    ++D +                                     G+D+VRF    
Sbjct: 573 NVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYGTDAVRFTFCA 632

Query: 429 RKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
             N+   + FD  +V+                 C  I       F  ++ +        +
Sbjct: 633 LANTGRDIKFDLKRVEGYRNF------------CNKI--WNATRFVLMNVEGQTVGQQAR 678

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS----VF--HGH--WSHG 539
              ++  E  +I  L +    +  A         A Y  DLA+     F  + +  W   
Sbjct: 679 PDLWELPEQWIISRLQKAEAAVHQAF--------ATYRLDLAAQAIYDFIWNEYCDWYVE 730

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576
              P L   + +  +   +R  L+     ++ + L +
Sbjct: 731 LTKPVLNDAEVSEERKAEVRRVLLA----VMEASLRL 763


>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 463

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 114/353 (32%), Gaps = 48/353 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+   + + GYEV    Y+++     + L      +   
Sbjct: 25  CGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYEVQ---YVSNFTDVDDKLI-----KAAN 76

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGK---ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            L      + E +    Y + VG      AD +     N  E           +  +  +
Sbjct: 77  ELGEEVPVIAERFIK-AYFEDVGSLGCTKADCHPRVTENMDE----------IIDFIQTL 125

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           I     A     D++     F  G        +D L        G       K     D 
Sbjct: 126 IDKGY-AYEADGDVYYKTRSF-EGYGKLSHQSVDELRS------GARIQVGEKKEDALDF 177

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L   +       D P  K    +    + +A    KY     + I +         
Sbjct: 178 ---TLWKAAKDNEISWDSPWGKGRPGWHIECSAMA---RKY---LGDSIDIHAGGQDLAF 228

Query: 365 KRLE---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
              E   A + A++ K      L    + +  +    KMSK  G+F+ +  ++ E     
Sbjct: 229 PHHENEIAQSEALTGKPFAKYWLHNGYINIDNE----KMSKSLGNFVLVHDIIKEHDPQV 284

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           +RF ML       +++    +  ++ +N    ++ AY+  +   + + ++   
Sbjct: 285 LRFFMLSVHYRHPINYSVELL--ENTKNAFGRLKTAYSNLQHRLKSSTNLTEG 335


>gi|255690192|ref|ZP_05413867.1| isoleucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624306|gb|EEX47177.1| isoleucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 1162

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   ++E  ++          F+V YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGIEEVRRKFFGTLYNTYSFFVLYA 776


>gi|82702731|ref|YP_412297.1| glutamyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|115305780|sp|Q2Y8L6|SYE_NITMU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|82410796|gb|ABB74905.1| glutamyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 465

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 93/279 (33%), Gaps = 41/279 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  V R   I D       L  S   +  QA
Sbjct: 7   APSPTGYLHIGGARTALFSWAYAR--KHGGKFVLR---IED-----TDLERST-AQSTQA 55

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           + +  + L   Y  G + +        + + +LL    + +        + AM +  R  
Sbjct: 56  ILDGMAWLGLDYDEGPFYQMQRLARYHEVAEQLLRRG-QAYYCYCSREELDAMREQQRA- 113

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
              L  ++D      D     P+ ++ ++             L  P        D+ + +
Sbjct: 114 -AGLKPRYD--GRWRDSREEPPAGVKPVV------------RLKNPLDGEVTFKDLIKGE 158

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  LL+ DG  TY    +       +    ++I   G DH     R  
Sbjct: 159 ITVANSELD---DLVLLRGDGVPTYNFGVV---IDDLDMNITHVIR--GDDHVNNTPRQI 210

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     Q        V +       ++SKR G  
Sbjct: 211 NILKALGAPLPQ-----YAHVPMILGADGERLSKRHGAV 244


>gi|325283241|ref|YP_004255782.1| glutamyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315050|gb|ADY26165.1| glutamyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 508

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 85/260 (32%), Gaps = 42/260 (16%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASL-- 153
               G E     +    +  +  ++ +PTG  HVG    A+          G  +  +  
Sbjct: 15  CRGQGGEATLCYVPMSDQPTVTRIAPSPTGDPHVGTAYQALFNSVFARQQGGRFIVRIED 74

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              + Y  T E  I D    +             A   N+ D       G Y +     L
Sbjct: 75  TDRNRYNATSEGRILDMLDWLGI--------QPDASPRNEDD------QGPYTQSQRAGL 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +Y+  LL           + +     ++  R   KA   + D ++    + R D    
Sbjct: 121 HRQYAEALLESG-----AAYRAFDTPEELEERR---KAAEARKDSYLG---YDRRDRELS 169

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           R+  D  A  G  +   L  P    T   D  R  ++F +  +    D+ LLK DG  TY
Sbjct: 170 REESDRRAAAGEEFVIRLKAPLEGQTVVRDRLRGDVVFDNAQLD---DKVLLKRDGFPTY 226

Query: 334 FAADLAYFKCKYERGFDNMI 353
               LA     +  G  ++I
Sbjct: 227 H---LAAMVDDHLMGVTHVI 243


>gi|195941556|ref|ZP_03086938.1| valyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|312149539|gb|ADQ29610.1| valyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 875

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 62/213 (29%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  +I +  + + +    N + +   +       N TG +H+GH    V+ D L    
Sbjct: 12  KAFEDEIYTKWLKNNVFLPDNSLFEKFSMVA--PPPNVTGVLHMGHALNFVLQDVLVRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
               +     +  + AG        +VF R+ + +  +  D                   
Sbjct: 70  RMKRHNTLWLFGTDHAG----IATQAVFERHLKKIGKSKDDF------------------ 107

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                      EE    I K         II + +  L   +D    +          + 
Sbjct: 108 ---------EREELVQEIFKLK--DRHRGIIVNQINKLGASYDHSREKFTLDENLCKAVN 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +L  +G +Y G         +     D +
Sbjct: 157 KVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEE 189


>gi|33303697|gb|AAP22256.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 400

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 81/292 (27%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++  ++    EE  L +     V  ++  I++  + ++I +D FI            + 
Sbjct: 23  DEHGQKIQKKAEE--LNVTPQAYVDNIVAGIKELWEKMDISYDDFI--RTTEDRHKDVVE 78

Query: 275 DIIDNLARQGYVY----------------------EGILPPPKSKTTQKCDMDRKQLLFR 312
            I   L  QG +Y                      + I+   K    +  D      L R
Sbjct: 79  KIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVR 138

Query: 313 STMV----GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG--- 348
                   G  VDR L   + +  +                    DLA  +  ++ G   
Sbjct: 139 EESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRV 198

Query: 349 ---FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                ++IYV              G+++   Y K   A    V ++  + + +   ++ +
Sbjct: 199 PGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILM 258

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 259 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 310


>gi|68535622|ref|YP_250327.1| valyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|90103534|sp|Q4JWU8|SYV_CORJK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68263221|emb|CAI36709.1| valS [Corynebacterium jeikeium K411]
          Length = 932

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 62/212 (29%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ + + L    V    +  +        +I     N TG +H+GH     + D +A  
Sbjct: 39  DPAAVEENLYQGWVDSGYFKADPSSDKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARR 98

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV      + AG    T                                V   L
Sbjct: 99  KRMQGFEVLWLPGSDHAGIATQT-------------------------------KVEANL 127

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +    +  ++  + ++  V ++  +    +I+  ++A+    D          G    +
Sbjct: 128 KETEGKDRFDYGRDAFVGKVWEWKDRYG-GVIQRQMRAIGDSVDWSRERFTLDDGLSRAV 186

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   L   G +Y        S   Q    D
Sbjct: 187 QTMFKELFDAGLIYRANRMVNWSPVLQTAISD 218


>gi|307824800|ref|ZP_07655023.1| isoleucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734158|gb|EFO05012.1| isoleucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 943

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 72/228 (31%), Gaps = 36/228 (15%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFIS 261
            +  +        L       W+P      +++MM+      I R     + I   +   
Sbjct: 429 FISMDKNKLREQALDEVKRVAWIPEWGQARIESMMEGRPDWCISRQRTWGVPITFFVHKE 488

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVG 317
             + H      I  +   + +QG      L   +    +    D+      + F S +  
Sbjct: 489 TGELHPRTAELIEQVAQRIEQQGIEAWFELEAAELLGAEAEQYDKMTDTLDVWFDSGVTH 548

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
                                A    K E+  F   +Y+ GSD   G+ +     + A++
Sbjct: 549 ---------------------ACVLEKREQLSFPADLYLEGSDQHRGWFQSSLLASVAMN 587

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           E      VL         D    KMSK  G+ +  + V+  +G+D +R
Sbjct: 588 EVAPYKAVLTHGF---TVDADGKKMSKSKGNVVAPQSVMKNLGADVLR 632


>gi|305663610|ref|YP_003859898.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378179|gb|ADM28018.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 979

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 83/269 (30%), Gaps = 19/269 (7%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K  S I+ S   +  ++    +K  I      P GP+H+GH R  ++ D +A      
Sbjct: 13  LAKKWSRILESERIFEADVDEFKSKYFITAAFMYPNGPIHIGHGRTYLIADIIARFKRLQ 72

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQALY----------NNDSDLPEGYYPGVY 205
           GY V     ++    G  I  +A ++    +  +           +    + +  Y   Y
Sbjct: 73  GYNVLFPMGFHY--TGTPIIAMAEAISEGDKDLIELFRDTYGVPSDEIDRMKDPLYLARY 130

Query: 206 LKHVGKELADKYS-SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
              V K++   Y  S           P  K +      K+              +    +
Sbjct: 131 FHRVSKDVMKLYGLSIDWRREFTTIDPEFKSFIHWQFRKLYEKGYIEKGTHPVGWCPRHE 190

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-P 323
              G      D+   +     +Y                +  + +   + +  +      
Sbjct: 191 MPVGMHDTKGDVEPEIGEFIAIY---FKDDNGVIYPTATLRPETIFGVTNIWVNPKAMYA 247

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            +K D    +   + AY + KY+  F+ +
Sbjct: 248 KIKLDNGDIWIVGEGAYHRLKYQLRFNLI 276


>gi|123440871|ref|YP_001004862.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087832|emb|CAL10618.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 965

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|121534787|ref|ZP_01666607.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306582|gb|EAX47504.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 826

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N   +P  +      +      +   +  +  +  +  +   P+G +H+GH R   +GD 
Sbjct: 2   NERYNPREIEAKWQKVWAEEKAFACEMNRQKPEYYVLEMFPYPSGHLHMGHVRNYSIGDV 61

Query: 150 LASLMAFSGYEV 161
           +A      GY V
Sbjct: 62  IARFKMMQGYNV 73


>gi|134045150|ref|YP_001096636.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132662775|gb|ABO34421.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 1034

 Score = 43.4 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 29/188 (15%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G+D  + +     A++A V +  +    ++        D    KMSK  G+ ++   V +
Sbjct: 558 GNDQVTKWFYSQHALSAVVFDDTSYEKCMMHGF---TLDETGEKMSKSLGNIVSPDDVTE 614

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G+D +RF +L    + E L F + ++ E        +  YA++    +          
Sbjct: 615 QYGADVLRFYLLSANKAWEDLRFSYSEMDETRSMLNTLWNSYAFSANYMVL--------- 665

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLAFY---LYD--L 528
              D F  N    +   D         L+    V + A  A E P+ L  Y   L D  L
Sbjct: 666 ---DDFVPNDEYFKHVKDEDAW----ILSRINTVAKEAVEALEKPH-LHTYTWTLRDFIL 717

Query: 529 ASVFHGHW 536
            + F   +
Sbjct: 718 -NDFSRWY 724


>gi|328953376|ref|YP_004370710.1| glutamyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453700|gb|AEB09529.1| glutamyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 464

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 88/282 (31%), Gaps = 53/282 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S +PTG +H+G  R A+     A              + N  G  I  +  +   R Q+ 
Sbjct: 9   SPSPTGFLHLGGARTALFNWLFAR-------------HYN--GTFILRIEDTDVERSQKI 53

Query: 189 LYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             ++     + L   +  G Y +    E    Y+ EL+                      
Sbjct: 54  YEDDIIAGLTWLGLDWDEGPYRQTERLETYRFYTQELIA------------RGAAYYCNC 101

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCD 303
            +++L+           +    RG+         +L  + G         P    T   D
Sbjct: 102 PKEELEQRR--------QAALARGEKPRYDGHCRDLGLKAGSDTAVRFRSPTDGITHWDD 153

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + +  + F +  +    D  L+++DG  TY   + A           ++I   G DH   
Sbjct: 154 LTKGAIAFDNAELD---DLVLVRADGVPTY---NFAVVVDDLTMNITHVIR--GDDHISN 205

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             R   +  A+     Q        + +       K+SKR G
Sbjct: 206 TPRQILIYQALGAPLPQFAH-----IPMILGPDRAKLSKRHG 242


>gi|327191133|gb|EGE58178.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 968

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 35/267 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADL 338
           V   IL    ++       +  +  F              D+      S  ++T+   D 
Sbjct: 530 VNARILDAFDAEGADAWFAEGAKERFLGNEHDPAKWSQVMDILDVWFDSGSTHTFTLED- 588

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +  +   +Y+ GSD   G+       +AA   +     VL         D   
Sbjct: 589 -----RPDLKWPADLYLEGSDQHRGWFHSSLLESAATRGRAPYNAVLTHGFTM---DEKG 640

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+    + V+ + G+D +R  ++    ++ L      ++             A
Sbjct: 641 EKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYADDLRVGKTIIQTNVD---------A 691

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQ 516
           Y + R+  R           +      +P+         QL++H LAE  +++     A 
Sbjct: 692 YRKLRNTIRWMLGTLAHDKGEEIALANLPELE-------QLMLHRLAELDQLVRENYDAF 744

Query: 517 EPYKLAFYLYDLAS-VFHGHWSHGREN 542
           +  K+A  L D A+      +   R++
Sbjct: 745 DFKKIARALIDFANVELSAFYFDVRKD 771


>gi|281207015|gb|EFA81199.1| hypothetical protein PPL_06036 [Polysphondylium pallidum PN500]
          Length = 1019

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 58/218 (26%), Gaps = 40/218 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L      SGYE      ++ +G     +            
Sbjct: 114 PNVTGSLHIGHALTTTIEDALVRFKRMSGYETLWIPGLDHSGIATQVV------------ 161

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V KEL  K +        EK+L  V  +      + I + L
Sbjct: 162 -------------------VEKELKSKQNLTRHQLGREKFLAEVHKW-TDKYSENINNQL 201

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +      D   S     +     +     +  R G VY            +    D    
Sbjct: 202 RKTGASLDWSRSVFTLDKQRSEAVETAFLHFYRSGLVYRATRLVNWCPELRSVISD---- 257

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAA---DLAYFKCK 344
                    +  R       + +Y      D+AY   K
Sbjct: 258 -IEVDHESFEKPRHYKIKSRAKSYEFGVIHDIAYRVAK 294


>gi|160894424|ref|ZP_02075200.1| hypothetical protein CLOL250_01976 [Clostridium sp. L2-50]
 gi|156863735|gb|EDO57166.1| hypothetical protein CLOL250_01976 [Clostridium sp. L2-50]
          Length = 1056

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 41/221 (18%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + +K    NV++   V+   D    KMSK  G+ +     +++ 
Sbjct: 569 DQTRGWFYSLMAISTLLFDKAPFKNVIVLGHVQ---DKDGQKMSKSKGNAVDPMDALNKY 625

Query: 418 GSDSVRFMMLWRKNSELLD-FDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQAK 469
           G+D++R+         L + F    V E  ++          FYV YA            
Sbjct: 626 GADAIRWYFYSNSAPWLPNRFHEDAVIECQRKFLGTLWNTYAFYVLYANI---------- 675

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKL---AFY 524
                        N  P E E D  +L L+    L++    ++        YK+      
Sbjct: 676 ------------DNFNPLEHELDYEKLSLMDKWLLSKLNSTVKAVDENLAAYKIPETTRV 723

Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           L +        +   R      + +   +      + L  A
Sbjct: 724 LEEFVDDLSNWY--VRRGRERYWAKGMEQDKVNAYMTLYTA 762


>gi|157165119|ref|YP_001466424.1| glutamyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|229559942|sp|A7ZCB6|SYE1_CAMC1 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|112801598|gb|EAT98942.1| glutamyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 431

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 60/424 (14%), Positives = 133/424 (31%), Gaps = 86/424 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+  + + SL   SG+                 L +    + +  
Sbjct: 5   APSPTGDMHIGNLRAAIF-NYICSLQDKSGF----------------ILRIEDTDKERNI 47

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                  L      G+  + +  +  +      L             +  +  ++  +  
Sbjct: 48  EGKEKDILEILSKFGIKPEQIYIQSENLKFHRQLASKLLIDKKAFACFCTEEELEAKKQK 107

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K   + +         + G    + D       + +V   I     ++T    D  + +
Sbjct: 108 AKEQGVAYR--------YDGTCERLSDAEVLNCEKPFV---IRMKKPTRTMSFTDAIKGE 156

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           L F    V       ++++D + TY   + A        G   +I   G DH     + +
Sbjct: 157 LSFEPDAVDSF---VIMRADKTPTY---NFACAVDDMLEGVTFVIR--GEDHVSNTPKQD 208

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416
            +   +          L  L+ +       KMSKR  +  +++ + ++            
Sbjct: 209 LIREGLGYTGKMNYAHLPILLNI----EGKKMSKRE-NESSVKWLFEQGFLPEAIANYLI 263

Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                         D+V++  + + +     FD  K+++ ++E         + +  S  
Sbjct: 264 LLGNKTPTEIFTIEDAVKWFDITKISRSPARFDVKKLEQINRE---------HIKLASKE 314

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-----------AEYPRVIENATI 514
           R  K+IF   +  +       QES         +  +            E+  +I+ A  
Sbjct: 315 R-IKEIFGVDESKVELVKFYTQESSLVPEIKAKVEAIYSPKIAPDEYKNEF-EIIKKAAR 372

Query: 515 AQEP 518
             +P
Sbjct: 373 NLKP 376


>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 485

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 54/313 (17%), Positives = 94/313 (30%), Gaps = 34/313 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R +VV D L   +   GY+VT      D   +I   A S             +  
Sbjct: 36  HIGHARSSVVFDVLVRYLRHLGYDVTFVRNFTDVDDKIIKKAASEGATCAGIAERYIAAF 95

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E       L+   +  A +Y + + +  E   +     Y   +                
Sbjct: 96  YEDMDKLGILRADAEPRATEYVAAMADMAER-LIETGHAYRTPSG--------------- 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        RDI D       +  G    P  +     D     L  +++  
Sbjct: 140 DVYFRVRSFADYGKLSGRDIED-------MRAGARVAPGDEKEDPLDF---ALW-KASKP 188

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           G+ V        G   +        +      FD    + G          E   A    
Sbjct: 189 GEPVWESPFGP-GRPGWHLECSVMSEKLLGIPFD----IHGGGQDLIFPHHENEIAQSEA 243

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              +            R     KMSK  G+FIT+R +      + +RF ++       LD
Sbjct: 244 ATGKEFCRFWVHNGFVRINT-EKMSKSLGNFITIRDIYKRYLPEVLRFFLVASHYRSPLD 302

Query: 437 FDFCKVKEQSKEN 449
           +   +  +++++ 
Sbjct: 303 YS-DQALDEAEKG 314


>gi|212693401|ref|ZP_03301529.1| hypothetical protein BACDOR_02917 [Bacteroides dorei DSM 17855]
 gi|237726966|ref|ZP_04557447.1| isoleucyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265756529|ref|ZP_06090735.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664045|gb|EEB24619.1| hypothetical protein BACDOR_02917 [Bacteroides dorei DSM 17855]
 gi|229433822|gb|EEO43899.1| isoleucyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|263233717|gb|EEZ19332.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 1162

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 QYGSDPLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|171463594|ref|YP_001797707.1| glutamyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689059|sp|B1XUR6|SYE_POLNS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|171193132|gb|ACB44093.1| glutamyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 468

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 93/295 (31%), Gaps = 73/295 (24%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A       +           G  I              
Sbjct: 11  APSPTGFIHLGNLRSALYPWAFAR------HNK---------GDFI-------------- 41

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   D+DL       V +   G           L    ++  PI +   +    ++++  
Sbjct: 42  LRIEDTDLERSTQEAVDVIIEGM--------TWLGLDLDEG-PIYQMQRIDRYHEVVKQM 92

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L +  + +  ++SE++ +      +RD       + + Y G+  P   K         K 
Sbjct: 93  LDS-GLAYPCYMSEEELN-----LLRDQQMANKEKPH-YNGLWRPEPGKMLPPIPEGVKP 145

Query: 309 LLFRSTMVGDDV------------------DRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           ++     +G  V                  D  + +SDG+ TY   +        +    
Sbjct: 146 VIRFKNSIGGSVIWNDAVKGQIEISNDELDDLVIARSDGTPTY---NFCVVIDDMDMQIT 202

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           ++I   G DH     R   +  A+          +   +    +    KMSKR G
Sbjct: 203 HVIR--GDDHVNNTPRQINIMKALGGTPP-----VYAHLPTVLNDSGEKMSKRNG 250


>gi|149193752|ref|ZP_01870850.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135705|gb|EDM24183.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 433

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 56/403 (13%), Positives = 122/403 (30%), Gaps = 68/403 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A                   G +   + +    + +  
Sbjct: 5   APSPTGDMHVGNLRVAIFNYIVAKQ----------------RGEKF-LIRIEDTDKERNI 47

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +   L      G+    V  +  + +  + L     +       +  +  +   R+ 
Sbjct: 48  EGKDKEILDILNLCGINYDKVVYQSNNFHIHQNLAKKLLEENKAFVCFCDEEELNFQREK 107

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K     +      +   + +   +        ++ +V     P    K   +     + 
Sbjct: 108 AKIEKRPYRYSGKCESLSKKEVEKLMR-----EKKEFVVRIKKPTADIKFIDEIKGKMQF 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
             F            +L++D + TY   + A      +  +D  + + G DH     +  
Sbjct: 163 TPFEVDSF------VILRADYTPTY---NFACSVD--DMLYDISLVIRGEDHLSNTPKQI 211

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG----DFITLRHVVDEVGS----- 419
            +   +   K      L  ++         K+SKR       ++     + +        
Sbjct: 212 HIRNLLGYDKEIKYAHLPIILNE----EGKKLSKRERHSSVKYLLKEGYLPQAIVNYLIL 267

Query: 420 -------------DSVRFMMLWRKNSELLDFDFCKVKEQSK------ENPVFYVQY--AY 458
                        +++ F  L + +     FD  K+K  +K      EN   ++ Y   Y
Sbjct: 268 LGNSFKREIFTLDEAIEFFDLSKISKSPAKFDIEKLKFINKAHMKKIENIAEFLGYHKNY 327

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                IFR   D   ++  + F R     E E   +E +++  
Sbjct: 328 NELLEIFRDESDTLKEI-KEKFERIFEECEDEEFKNEREILKK 369


>gi|114705824|ref|ZP_01438727.1| leucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538670|gb|EAU41791.1| leucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 871

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  ++   +G+   +          +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  RWQTAWDEAGLYETKTDAPGEKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYKRAQGF 72

Query: 160 EVT 162
            V 
Sbjct: 73  NVI 75


>gi|254225902|ref|ZP_04919504.1| valyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621528|gb|EAZ49860.1| valyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 420

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|327479529|gb|AEA82839.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 943

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 89/248 (35%), Gaps = 30/248 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------G 329
              G ++   +   + +  Q+ +    +   +   + ++GD+  +    +D        G
Sbjct: 483 KESGELHPRTVELME-QVAQRVEQGGIEAWSKLDAAELLGDEAVQYEKITDTLDVWFDSG 541

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  +           +E+G    +Y+ GSD   G+        AA+ +  A    LL   
Sbjct: 542 TTHWHVMR-GSHPMGHEQGPRADLYLEGSDQHRGWFHSSLLTGAAI-DGHAPYKGLLTHG 599

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             +  +G   KMSK  G+ I  + + D +G+D +R  +         D+       +   
Sbjct: 600 FTVDENGR--KMSKSLGNVIAPQEITDSMGADILRLWV------SATDYSGEMAVSKQ-- 649

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
                +Q +    R I   A+ +  +LD     ++++P +         +   L    R 
Sbjct: 650 ----ILQRSADAYRRIRNTARFLLSNLDGFDPAQHMVPNDQLIALDRWAIDRALL-LQRE 704

Query: 509 IENATIAQ 516
           IE A  + 
Sbjct: 705 IEEAYTSY 712


>gi|325192831|emb|CCA27232.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 1014

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 53/194 (27%), Gaps = 33/194 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +    +      + +            +     N TG +H+GH     + D L   
Sbjct: 43  DPKAVETGWTQFWQEELSHSSKQNTSKMSFTMLLPPPNITGSLHIGHALTITIQDALVRW 102

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G  V+    ++ AG                                V  +H+ KE 
Sbjct: 103 HHMQGRNVSWIPGLDHAGI---------------------------ATQSVVERHLLKEN 135

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++      F E  W    K +  +     I D ++ L    D         +     +
Sbjct: 136 MTRHELGREEFIERVWAWK-KRFGTR-----ILDQMEQLGASLDREKLYSTLDKKRSDAV 189

Query: 274 RDIIDNLARQGYVY 287
           +    +L  +G ++
Sbjct: 190 KKAFIHLYEKGLIF 203


>gi|323483654|ref|ZP_08089038.1| hypothetical protein HMPREF9474_00787 [Clostridium symbiosum
           WAL-14163]
 gi|323692618|ref|ZP_08106850.1| glutamate-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323403081|gb|EGA95395.1| hypothetical protein HMPREF9474_00787 [Clostridium symbiosum
           WAL-14163]
 gi|323503315|gb|EGB19145.1| glutamate-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 484

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 142/390 (36%), Gaps = 56/390 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E ++  A      +  
Sbjct: 9   APSPTGKMHVGNLRTALYAYLIAKHEDGDYILRI-----EDTDQERFVEGA---TEIIYN 60

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++     +     D   P G Y     +  G  +  +Y+  LL+  E  +        + 
Sbjct: 61  TLIDTGLKHDEGPDIGGPVGPYVQSDRQKQG--IYMEYAKVLLDKGE-AYYCFCGQERLN 117

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           ++ + +  +      +H + +++++      + +  +I               P + KTT
Sbjct: 118 SLKRTVNGEEIMTYDKHCLNLTKEEVEANLKAGMPFVIRQ-----------NNPSEGKTT 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              ++        S    +  D  L+KSDG  TY   + A     + +G  ++  V G++
Sbjct: 167 FHDEIYGDI----SVDNSELDDMVLIKSDGYPTY---NFANVVDDHLQGITHV--VRGNE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--V 417
           +     +   +  A   +      + C  +    +    K+SKR+G   + + ++++  +
Sbjct: 218 YLSSSPKYNRLYEAFGWEVP--VYVHCPTIT---NEEHKKLSKRSGHS-SYQDLIEQGFI 271

Query: 418 GSDSVRFMMLW----RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
               V F+ L       N E+   D   VKE + +N       A      +     +   
Sbjct: 272 SEAVVNFVALLGWSPENNQEIFSLD-ELVKEFNYKNISKSP--AVFDMVKLKWMNGEYIK 328

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            +DF+ F     P   +  T EL L   +A
Sbjct: 329 AMDFERFYEMAEPYIRKAVTKELDL-KKIA 357


>gi|111221510|ref|YP_712304.1| valyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111149042|emb|CAJ60724.1| Valyl-tRNA synthetase [Frankia alni ACN14a]
          Length = 906

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           D    KMSK  G+ +T   +++E GSD+VR+     +      FD  ++K 
Sbjct: 590 DPDRKKMSKSKGNVVTPMGLLEEHGSDAVRYWAASGRPGTDTAFDVGQMKN 640


>gi|86740020|ref|YP_480420.1| valyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566882|gb|ABD10691.1| valyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 903

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           D    KMSK  G+ +T   +++E GSD+VR+     +      FD  ++K 
Sbjct: 616 DPDRKKMSKSKGNVVTPMGLLEEHGSDAVRYWAASGRPGTDTAFDVGQMKN 666


>gi|58584862|ref|YP_198435.1| leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311620|sp|Q5GS31|SYL_WOLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58419178|gb|AAW71193.1| Leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 865

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K +        ++      +  K  +  +   P+G +H+GH R  V+GD +A      G+
Sbjct: 6   KNVEKFYQDRWDFSIGKNNEQGKCYVLEMFPYPSGKIHMGHLRNYVIGDVIARYKRACGF 65

Query: 160 EV 161
           EV
Sbjct: 66  EV 67


>gi|328783339|ref|XP_001120625.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial [Apis
           mellifera]
          Length = 645

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 136/409 (33%), Gaps = 56/409 (13%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH   AV+ DT+A   A  G+ V      ++ G ++   A        
Sbjct: 132 YVNAGP----HIGHLYTAVLADTIARFNAMLGHSVFLSTGTDEHGTKVQKAANKAILSTF 187

Query: 187 QALYNNDSDLPE--GYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMM 242
           +          E    +   Y K +     +++ + +L+F    EK   I +        
Sbjct: 188 EYCTQISHQFQEMCDIFQVKYSKFIRT-TEEQHQNAVLHFWNCLEKNGHIYR-GKYSGWY 245

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            I  +   +     +         +G      D I+ +    Y +       + K   K 
Sbjct: 246 NISEETFISDKEIIEKNFKNIKIKKGCIIESGDTIEWMEEDSYKFRLTSFKDQLKYWLKN 305

Query: 303 DMDRKQLLFR-------STMVGDDVDRPLLK--------SDGSYT----------YFAAD 337
           +   +  ++R         +    + RP+ +        SD S+T          Y  + 
Sbjct: 306 ENVIEPAIYRKILIPWLEELQDLSISRPISRVPWAIPTPSDKSHTIYVWLDALVNYLTS- 364

Query: 338 LAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           + Y    ++  +   + ++G D    H  Y     A   A   +  +  +          
Sbjct: 365 VGYPNNSFKEFWPPTVQIIGKDILKFHGIY---WPAFLMAAGLEPPKKLICHGHWAV--- 418

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVF 452
                KMSK  G+ I+    +++   D +R+ +L +       +++  KV++        
Sbjct: 419 --KDKKMSKSKGNVISPFIAMNDFTQDGLRYFLLRQAILDTDANYNKSKVRKILNSELAD 476

Query: 453 YVQYAYARCR-------SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
            +     RC         I   + +    L+ +L  +N+   E+  + +
Sbjct: 477 TLGNLVNRCFGKTINPDGIIYNSIEYKSILNSELAVKNIKILENLSEEA 525


>gi|306841871|ref|ZP_07474551.1| glutamyl-tRNA synthetase [Brucella sp. BO2]
 gi|306288001|gb|EFM59403.1| glutamyl-tRNA synthetase [Brucella sp. BO2]
          Length = 473

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRTM 256


>gi|294778619|ref|ZP_06744041.1| isoleucine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447568|gb|EFG16146.1| isoleucine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 1162

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 QYGSDPLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|261819783|ref|YP_003257889.1| valyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261603796|gb|ACX86282.1| valyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 951

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +        +I     N TG +H+GH     + DTL   
Sbjct: 6   NPQDIEQPLYEHWEKQGYFKPHGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  E ++  +  +  ++   I    ++ L    D          G  + +
Sbjct: 95  AAEEGKTRHDYGREAFIDKIWQWKGESGGNITNQ-MRRLGNSVDWERERFTMDEGLSNAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          +    D +
Sbjct: 154 KEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|254797222|ref|YP_003082063.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590469|gb|ACT69831.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 521

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 147/438 (33%), Gaps = 78/438 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+ NP    H+GH   +++ D L   +  +G+EV      ++ G ++   A        
Sbjct: 29  YVNDNP----HIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTA-------- 76

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL-PIVKDYSVQAMMKII 245
           +     + D          + HV +   D   +    F +           +VQ +   I
Sbjct: 77  KKHGKCEIDF---------VDHVSRRFRDLCVAMHYEFSDFIRTTETRHKEAVQTLWSTI 127

Query: 246 RD-------DLKALNIQHDI-FISEDDFHRGDP------------------SPIRDIIDN 279
                    +      + D  F +E +   G                    S   + +  
Sbjct: 128 SKNNSISLGEYSGWYSERDEAFYTEAELQNGLAPTGAPVSWTKEACYFFKLSQFSEPLKK 187

Query: 280 LARQGYVY------EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
           L  +   +         +    +       + R ++ +   +  D      +  D    Y
Sbjct: 188 LYAENPTFIQPKSRFNEMLAFLNTGMHDLSISRTRVKWGINVPDDPAHTVYVWLDALTNY 247

Query: 334 FAADLAYFKCKYERGF------DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINV 383
            ++ + Y     +  F        +I+++G D    HS Y     A   A + K   + +
Sbjct: 248 VSS-IGYPNTSTDSLFSAFWDNARVIHIIGKDILRFHSIY---WPAFLMAANLKTPDVIL 303

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                +    DG   K+SK  G+ I    ++ E G D VR+ ++ R+ +   D +F KV 
Sbjct: 304 AHGWWLN---DGE--KISKSLGNIIDPFELISEFGVDPVRYFLI-REITVGKDGNFSKVN 357

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE----LQLI 499
            + + N            R++   AK + P +       N + + +     E    ++L+
Sbjct: 358 LKERINSELADNIGNLFHRTLTLTAKLLGPKIGEIYESENELLEFAYSLAKEYKNDIELL 417

Query: 500 VHLAEYPRVIENATIAQE 517
              +   R+I+ ++ A E
Sbjct: 418 DLNSSLDRIIQLSSKANE 435


>gi|90580734|ref|ZP_01236537.1| valyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438002|gb|EAS63190.1| valyl-tRNA synthetase [Vibrio angustum S14]
          Length = 953

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G               D +
Sbjct: 152 AVQEVFVRLYQEDLLYRGKRLVNWDPKLHTAISDLE 187


>gi|62185261|ref|YP_220046.1| valyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312583|sp|Q5L5J6|SYV_CHLAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|62148328|emb|CAH64095.1| valyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 940

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 60/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  L + L +       +            I     N TG +H+GH     + D L   
Sbjct: 11  DPKGLEEKLYAFWEESTMFTAQAASDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+EV      + AG    T+                               V + L
Sbjct: 71  KRMSGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   ++F  E++L  V  +  ++   +I   L+ L    D               +
Sbjct: 100 YSSLGKRRVDFSREEFLEHVWQWKEKSE-GVILSQLRQLGCSCDWSRLRFTMEPLANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G++Y G          Q    D +
Sbjct: 159 KKAFKILFDKGHIYRGNYLVNWDPVLQTALADDE 192


>gi|254976852|ref|ZP_05273324.1| valyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094239|ref|ZP_05323717.1| valyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315992|ref|ZP_05357575.1| valyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518649|ref|ZP_05386325.1| valyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651771|ref|ZP_05398673.1| valyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684797|ref|YP_003216082.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688455|ref|YP_003219589.1| valyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260210960|emb|CBA66224.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214472|emb|CBE06944.1| valyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 888

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L    +    +            I     N TG +H+GH     + D L 
Sbjct: 9   TYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALDHTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE    +++   G    ++A  V                           V +
Sbjct: 69  RWKRMDGYEA---FWL--PGTDHASIATEVK--------------------------VVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  +          E++L    ++        I + LK L    D          G   
Sbjct: 98  RIKKQEGKTKYEIGREEFLKRAWEWK-DEFGGKISNQLKQLGDSCDWDKERFTMDEGCNE 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +   +L  +G++Y G
Sbjct: 157 AVIEFFVSLYEKGHIYRG 174


>gi|56964107|ref|YP_175838.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822091|sp|Q5WFI3|SYI_BACSK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56910350|dbj|BAD64877.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 923

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 93/291 (31%), Gaps = 53/291 (18%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +W+P   +  +  M++  R D      +A  +   +F  ED         I  + +    
Sbjct: 430 EWIPAWGETRLHNMVRD-RGDWCISRQRAWGVPIPVFYGEDGTEIVSEETIEHVSNLFRE 488

Query: 283 QG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            G            +  G   P         + D   + F S      V           
Sbjct: 489 HGSNVWFEREAKDLLPPGFTSPHSPNGHFTKETDIMDVWFDSGSSHQGV----------- 537

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                     + + +  F   +Y  GSD   G+     + + A++       VL    V 
Sbjct: 538 ---------LRERNDLVFPADLYFEGSDQYRGWFNSSLSTSVAINGVAPYKGVLSHGFVM 588

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +    V+ ++G+D +R  +        +D+       +  ++ 
Sbjct: 589 ---DGEGKKMSKSLGNIVVPNTVMKQLGADILRLWVAS------VDYQAD---SRVSDSI 636

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +  V   Y + R+ FR       D D  +   N +P++         L+  
Sbjct: 637 LKQVAETYRKIRNTFRFLLGNLHDFDPKI---NAVPRDQLTGVHAFLLVRL 684


>gi|332185764|ref|ZP_08387511.1| glutamyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014122|gb|EGI56180.1| glutamyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 480

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 107/364 (29%), Gaps = 78/364 (21%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYIN 168
                     +   + +PTG +H+G  R A+     A       L+     +  R     
Sbjct: 9   PAPTADANAVVTRFAPSPTGFLHIGGARTALFNWLFARHHGGKFLLRIEDTDRVRS---- 64

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
               Q    A+    R+    ++ D+                   AD+++       E  
Sbjct: 65  ---TQPAIDAILDGMRWLGLDWDGDAVFQ-------------FARADRHAEVAREMMERG 108

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                  Y      + I    +A             +   DP+   +        G  + 
Sbjct: 109 -----HAYRCYMTQEEITAQREAAQAAKQPLRIRSPWRDADPATAPE--------GQPFV 155

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
             L  P+  +    D  +  +  ++  +    D  LL+SDG+ TY    LA     ++ G
Sbjct: 156 VRLRAPREGSVTIEDQVQGSVTVQNAELD---DLILLRSDGTPTYM---LAVVVDDHDMG 209

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
             ++I   G DH     R   +  A+   +          + L       K+SKR G  +
Sbjct: 210 VTHVIR--GDDHLNNAFRQLPIYKAMGWPEPT-----YAHIPLIHGSDGAKLSKRHG-AV 261

Query: 409 TLRHVVDEVGS-------------------------DSVRFMMLWRKNSELLDFDFCKVK 443
            +    DE+G                          ++V++  L         FD  K++
Sbjct: 262 GIEAYRDEMGILPEALDNYLLRLGWGHGDAEIISREEAVKWFDLAAVGKAPSRFDIKKLE 321

Query: 444 EQSK 447
             + 
Sbjct: 322 NLNG 325


>gi|225680312|gb|EEH18596.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1027

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 17/166 (10%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +S +   K L         + R       +  +        G +HVGH    ++ D + 
Sbjct: 26  RVSQADQAKYLVRCTDDLYTWQRRQRPIENRFVLHDGPPYANGDLHVGHALNKILKDIVC 85

Query: 152 SLMAFSGYEVTREYYINDA---GAQINTLALSVFWRYQQAL---YNNDSDLPEGYYPGVY 205
            +   +G    R  Y++     G  I   AL +  +          N+     G      
Sbjct: 86  RVQLAAG---KRIDYVSGWDCHGLPIELKALELQAQRDTGKVQSSGNEKGNANGNLGAAT 142

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           +++  ++LA+K   E +           + ++V A        +  
Sbjct: 143 IRNAARQLAEKTVVEQM--------KGFRQWAVMADWNNSWKTMDK 180


>gi|167587404|ref|ZP_02379792.1| valyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 955

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 77/273 (28%), Gaps = 44/273 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF----VSANPTGPMHVGHCRCAVVG 147
            L+ S+    + +      E              +F       N TG +H+GH     + 
Sbjct: 5   TLAKSFEPHTIEAQWGPEWEKRGYAAPAFDPGRPDFAIQLPPPNVTGTLHMGHAFNQTIM 64

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L              Y+          L  +  W            +P   + G+  +
Sbjct: 65  DGLTR------------YH--------RMLGENTLW------------VPGTDHAGIATQ 92

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V +   D       +   E+++  V ++  Q+    I   ++ L    D          
Sbjct: 93  IVVERQLDAQGVSRHDLGREQFVERVWEWKQQSG-STITGQVRRLGASTDWSREYFTMDD 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
              + +RD+   L  QG +Y G               D +            +  PL+  
Sbjct: 152 KMSAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPLVDG 211

Query: 328 DGSYTYFAA-------DLAYFKCKYERGFDNMI 353
            G+ T           D+A      +  + ++I
Sbjct: 212 SGTLTVATTRPETMLGDVALMVHPEDERYKHLI 244


>gi|148653975|ref|YP_001281068.1| valyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148573059|gb|ABQ95118.1| valyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 976

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           Y +         +I     N TG +H+GH     + D+L       G     +   + AG
Sbjct: 39  YFQPKYNSDESFSIALPPPNVTGSLHMGHGFNNAIMDSLTRYHRMLGDNTLWQPGTDHAG 98

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
                +                    E       +K               +   E ++ 
Sbjct: 99  IATQMVV-------------------ERRLNAEGIKR-------------TDLTREDFIN 126

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            V ++  ++   I R  ++ L    D          G  + ++++   L  +G +Y G  
Sbjct: 127 KVWEWKEESGGNITRQ-IRRLGSSVDWSRERFTMDEGLSNAVKEVFVRLHDEGLIYRGKR 185

Query: 292 PPPKSKTTQKCDMDRK 307
                   Q    D +
Sbjct: 186 LVNWDPKFQTALSDLE 201


>gi|13357827|ref|NP_078101.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762145|ref|YP_001752350.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508747|ref|ZP_02958221.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701957|ref|ZP_02971594.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|12585354|sp|Q9PQM4|SYV_UREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|11271419|pir||E82913 valyl-tRNA synthetase UU267 [imported] - Ureaplasma urealyticum
 gi|6899238|gb|AAF30676.1|AE002123_9 valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827722|gb|ACA32984.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675679|gb|EDT87584.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700717|gb|EDU18999.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 874

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 80/220 (36%), Gaps = 32/220 (14%)

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV--KRLEAVAAAVSEKKAQINV 383
            S G +        Y    ++R F   + V G D   +    R+   +  + EKK   +V
Sbjct: 452 FSSGMWPLLTTKWNYNSHFFDRYFPTSLIVTGMD-ILFFWVSRMMNFSQYLVEKKPFKDV 510

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           L+  L+   RD    KMSK  G+ I    ++D+ G D++R          E L+F   ++
Sbjct: 511 LIHGLI---RDSQGRKMSKSLGNGIDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERL 567

Query: 443 KEQSKE-----NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                      N   Y++       ++       F D+D        I  E    T E+ 
Sbjct: 568 GANWNYLNKIWNIAKYIENLDEINDNL------NFEDVDKFCDVNKWILTELSKLTLEIN 621

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHW 536
              ++ +Y  V+              YLYD + + F  ++
Sbjct: 622 --KNMDKYNLVVA-----------TKYLYDFIWNTFASYY 648


>gi|332669954|ref|YP_004452962.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas fimi ATCC 484]
 gi|332338992|gb|AEE45575.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas fimi ATCC 484]
          Length = 879

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 39/180 (21%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   +++E GSD+VR+     +      F+  ++K   +      
Sbjct: 596 DPDRKKMSKSKGNVVTPMGLLEEHGSDAVRYWAASARLGTDAAFEVGQMKIGRR------ 649

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                     I   +K        DL P  V     + D +       LA    V+E AT
Sbjct: 650 ------LAIKILNASKFALSFGTADLDPALVT---VDLDRA------MLAGLADVVEKAT 694

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRL---RFVQANNRKLTM----MRLQL 562
            A +      Y      +L+  F   W+   +   L   R   A   +++      R  L
Sbjct: 695 AALD-----AYDHTRALELSETF--FWTFCDDYLELVKDRAYGAGAEQVSAETASARAAL 747


>gi|299134986|ref|ZP_07028177.1| glutamyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298589963|gb|EFI50167.1| glutamyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 473

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 79/232 (34%), Gaps = 63/232 (27%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           ++ S QA +  I D LK L I  D    E  +        R++ + L  +G  Y     P
Sbjct: 48  RERSTQAAIDAILDGLKWLGIDWD---GETIYQFSRAGRHREVAELLLAEGKAYRCYATP 104

Query: 294 PK-SKTTQKCDMDRKQLLFR---------------------------STMVGDDV----- 320
            + ++  +    + + + +                             T++ D V     
Sbjct: 105 EELTQMREAARAEGRAVRYDGRWRDRDPAEAPAGAKPVIRLKAPQSGETVIEDQVQGRVV 164

Query: 321 -------DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
                  D  LL+SDG+ TY    LA     ++ G  ++I   G DH     R + +  A
Sbjct: 165 WQNENLDDLVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDHLINAARQKHIYDA 219

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           +        V +   + L       K+SKR G           +G ++ R M
Sbjct: 220 LGWD-----VPVMAHIPLIHGPDGSKLSKRHG----------ALGVEAYRAM 256


>gi|282900674|ref|ZP_06308616.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194474|gb|EFA69429.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 860

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 94  SPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            P+ + +    +    G++       +     +      P+G +H+GH R   + D +A 
Sbjct: 8   DPAAIEEKWQQLWSELGLDKTPQDKNQPKFYALSMF-PYPSGSLHMGHVRNYTITDVIAR 66

Query: 153 LMAFSGYEV 161
           L    GY V
Sbjct: 67  LKRMQGYRV 75


>gi|255308304|ref|ZP_05352475.1| valyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 888

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L    +    +            I     N TG +H+GH     + D L 
Sbjct: 9   TYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALDHTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE    +++   G    ++A  V                           V +
Sbjct: 69  RWKRMDGYEA---FWL--PGTDHASIATEVK--------------------------VVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  +          E++L    ++        I + LK L    D          G   
Sbjct: 98  RIKKQEGKTKYEIGREEFLKRAWEWK-DEFGGKISNQLKQLGDSCDWDKERFTMDEGCNE 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +   +L  +G++Y G
Sbjct: 157 AVIEFFVSLYEKGHIYRG 174


>gi|255102404|ref|ZP_05331381.1| valyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 888

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L    +    +            I     N TG +H+GH     + D L 
Sbjct: 9   TYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALDHTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE    +++   G    ++A  V                           V +
Sbjct: 69  RWKRMDGYEA---FWL--PGTDHASIATEVK--------------------------VVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  +          E++L    ++        I + LK L    D          G   
Sbjct: 98  RIKKQEGKTKYEIGREEFLKRAWEWK-DEFGGKISNQLKQLGDSCDWDKERFTMDEGCNE 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +   +L  +G++Y G
Sbjct: 157 AVIEFFVSLYEKGHIYRG 174


>gi|225023694|ref|ZP_03712886.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
 gi|224943576|gb|EEG24785.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
          Length = 927

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 107/332 (32%), Gaps = 58/332 (17%)

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPS 271
              L    + ++ P      ++AM++      + R       +         + H    +
Sbjct: 433 DKALKAVDDTEFFPAWGRARLEAMIEGRPDWVVSRQRFWGTPMTFFAHKETGELHPDSAA 492

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            +  +   + ++G      L   +  + + C+            + D +D   +  D   
Sbjct: 493 LLEKVALLIEKKGINAWFELDKAELLSPEDCEQY--------NKLPDTMD---VWFDSGS 541

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+F+      K + E  +   +Y+ GSD   G+ +       A   +     +L    V 
Sbjct: 542 THFSV----LKQRPELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAPYKQLLTHGFVV 597

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ +  + V +E G+D +R        S  L      +K  ++   
Sbjct: 598 ---DQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAATDYSGELAISKEILKRVTE--- 651

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAE---- 504
                 +Y R R+          D +      + +PQ    E D   L L   L E    
Sbjct: 652 ------SYRRIRNTLSFLFANLKDFN---PIEDAVPQADMVEIDRYALVLARQLQEKVSG 702

Query: 505 --YP---------RVIENATIAQEPYKLAFYL 525
             YP          +++  +        AFYL
Sbjct: 703 SHYPRYAFHFAVQDIVQFCSEDLG----AFYL 730


>gi|290890338|ref|ZP_06553416.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
 gi|189030331|sp|Q04FL2|SYL_OENOB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|290480023|gb|EFD88669.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
          Length = 810

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  YF   +     K     + +       +YV G++H+     Y +        +   
Sbjct: 501 GSSWYFLRYIDPHNDKVLADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGIV 560

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             +          +       KMSK  G+ +    +VD  G+D++R   +
Sbjct: 561 PTKEPFQKLVNQGMILGTNHEKMSKSKGNVVNPDEIVDSYGADALRVYEM 610


>gi|149031823|gb|EDL86758.1| rCG41831 [Rattus norvegicus]
          Length = 946

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 57/214 (26%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++ +  +           R     G   ++     N TG +H+GH     + D   
Sbjct: 108 YVEAAWYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDAFV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V      + AG     +     WR ++   +  S          +L+ V +
Sbjct: 168 RWHRMRGDRVLWIPGSDHAGIATQAVVEKQLWRERRVRRHELS-------REDFLRAVWQ 220

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +K                            I + L AL    D          G  +
Sbjct: 221 WKQEKGGE-------------------------IYEQLCALGASLDWDRECFTMDAGSSA 255

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 256 AVTEAFVRLYDLGLLYRNRQLVNWSCTLRSAISD 289


>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|187629811|sp|A1VDQ5|SYC_DESVV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 485

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 97/311 (31%), Gaps = 33/311 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AVV D L   +  +G +VT      D   +I   A       QQ         
Sbjct: 36  HIGHARSAVVFDVLVRYLRHTGLDVTFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTF 95

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E       L+   +  A  +  E++   E K +   K Y+  +                
Sbjct: 96  YEDMDRLNVLRADIEPKATGHILEMIALCE-KLIAKGKAYATPSG--------------- 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        RDI D       +  G    P  +     D     L   +   
Sbjct: 140 DVYFRVRSFPEYGKLSGRDIDD-------MRSGARVAPGEEKEDPLDF---ALWKSAKPG 189

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 P  +    +    + ++      E+     + + G          E   A    
Sbjct: 190 EPSWTSPWGEGRPGWHIECSAMS------EKHMPLPLDIHGGGQDLIFPHHENEIAQTEA 243

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              +  V    +   +      KMSK  G+F T+R +++    + +RF +L +     +D
Sbjct: 244 ALDKPFVRYW-MHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSPID 302

Query: 437 FDFCKVKEQSK 447
           F F  + E  K
Sbjct: 303 FTFDSMDEAEK 313


>gi|87200859|ref|YP_498116.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136540|gb|ABD27282.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 904

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 28/122 (22%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYV 364
            L   +T+   D D PLLK             Y       GFD +++   +       + 
Sbjct: 492 ALWPFATLGWPDEDAPLLKK-----------HYPNDLLVSGFD-ILFFWDARMAMQGLHF 539

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
                    V  KK  ++        L R     KMSK  G+ +    ++D+ G+D++RF
Sbjct: 540 ------MKEVPWKKLYLH-------GLVRAADGAKMSKSKGNVVDPLGLIDKYGADALRF 586

Query: 425 MM 426
            M
Sbjct: 587 FM 588


>gi|88606767|ref|YP_505013.1| glutamyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|115305747|sp|Q2GKT8|SYE2_ANAPZ RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|88597830|gb|ABD43300.1| glutamyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 468

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 94/296 (31%), Gaps = 66/296 (22%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              +   + +PTG +H+G  R A+     A                              
Sbjct: 1   MRVVTRFAPSPTGSLHLGGARTALFNWLFAR---------------------------HH 33

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             ++   + + D            +  +           ++          V        
Sbjct: 34  KGKFLLRMEDTDKKRSSDVVVQSIIDDMSWLGLQHDGDIVVQSSRAARHVAVA------- 86

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHR------GDPSPIRDI--IDNLARQGYV----YEG 289
                 +L  L   +  + SED+ +       G     R +    +L   G +    Y  
Sbjct: 87  -----RELVELGRAYRCYCSEDEVNEQKLQSEGTGKYFRHVCPWKHLNSTGDLPNKPYVV 141

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            L  P++ T +  D    ++  +S  +    D  +L+SDG+ TY    LA     ++   
Sbjct: 142 RLKSPENTTIEFLDGVYGKISVKSDQID---DMVILRSDGTPTYL---LAVVVDDHDMEI 195

Query: 350 DNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            ++I   GSDH +  VK++  +A A+S    +        + L  D    K+SKR 
Sbjct: 196 THIIR--GSDHITNTVKQI-VLAEAMSWVSPKFFH-----IPLIHDENGAKLSKRN 243


>gi|78485381|ref|YP_391306.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123728026|sp|Q31GU1|SYM_THICR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78363667|gb|ABB41632.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 680

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 115/387 (29%), Gaps = 65/387 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
              K+ I        GP+H+GH    +  D  A      G+E       +  G  I   A
Sbjct: 3   NTRKILITSALPYANGPIHLGHLVEYIQTDIWARFQKMRGHECYYVCADDAHGTPIMLRA 62

Query: 179 LS-------VFWRYQQALYNNDSDL------------PEGYYPGVYLKHVGKELADKYSS 219
            +       +  R  +    + +              PE  +   Y+    KE       
Sbjct: 63  QAEGIDPEDLIARISEEHQTDFAGFNINFDFYHSTNSPENKHFASYIYTQLKEQNHISRK 122

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDD------LKALNIQH---DIFI---------- 260
            +  F + +    + D  ++      + D       +A    +   D+            
Sbjct: 123 TIKQFYDPEKKMFLPDRFIKGTCPKCKTDDQYGDNCEACGATYSPTDLLNPKSAVSGATP 182

Query: 261 --SEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQLLFRSTM 315
              E D    + S   D++     QG++       L        +  D+ R    F   +
Sbjct: 183 IEKETDHLFFELSHFEDMLKEWTHQGHLQTQIANKLDEWFESGLRAWDISRDAPYFGFEI 242

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---------MIYVMGSD----HSG 362
            G+      +  D    Y A+  A    K    FD          + + +G D    H+ 
Sbjct: 243 PGEKDKFFYVWLDAPVGYMASFKA-LCDKTGLDFDEFWKADSTTELYHFIGKDIIYFHAL 301

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +     A+ +    +             L  DG   KMSK  G FI  +  +D +  + +
Sbjct: 302 F---WPAMLSGAGFRTPNAIFSHGF---LTVDGQ--KMSKSRGTFIMAKTYLDHLNPEYL 353

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R+    + NS + D D        + N
Sbjct: 354 RYYFAAKLNSRIDDIDLSLEDFAQRVN 380


>gi|47087097|ref|NP_998728.1| valyl-tRNA synthetase, mitochondrial precursor [Rattus norvegicus]
 gi|81863913|sp|Q6MG21|SYVM_RAT RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|46237650|emb|CAE84026.1| KIAA1885 protein [Rattus norvegicus]
          Length = 1065

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 57/214 (26%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++ +  +           R     G   ++     N TG +H+GH     + D   
Sbjct: 108 YVEAAWYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDAFV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G  V      + AG     +     WR ++   +  S          +L+ V +
Sbjct: 168 RWHRMRGDRVLWIPGSDHAGIATQAVVEKQLWRERRVRRHELS-------REDFLRAVWQ 220

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +K                            I + L AL    D          G  +
Sbjct: 221 WKQEKGGE-------------------------IYEQLCALGASLDWDRECFTMDAGSSA 255

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 256 AVTEAFVRLYDLGLLYRNRQLVNWSCTLRSAISD 289


>gi|332526040|ref|ZP_08402178.1| valyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109883|gb|EGJ10511.1| valyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 944

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 37/217 (17%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ +    + +  S   +   L        I+    N TG +H+GH     + D+L  
Sbjct: 8   FEPAAIEARWAPVWESSGAHAPTLDTAKPSFCIQLPPPNVTGTLHMGHAFNQTIMDSLTR 67

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G+        + AG   QI      V  R  QA+  +  +L              
Sbjct: 68  YHRMRGFNTLWVPGTDHAGIATQI------VVERQLQAVGESRHEL-------------- 107

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                       NF    W    K  S   + + +R    +++  H+ F  +D   R   
Sbjct: 108 ---------GRKNFVARVW--DWKHASGATITRQMRRLGDSVSWDHEYFTMDDKLSR--- 153

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + +    L  +G +Y G          Q    D +
Sbjct: 154 -VVTETFVRLYEEGLIYRGQRLVSWDPVLQSAVSDLE 189


>gi|262184706|ref|ZP_06044127.1| valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 912

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 32/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    V+   +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 24  PQAVEKDLYEGWVNAGYFTPDASSEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 83

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    T                                V   L 
Sbjct: 84  RMQGYATLWLPGADHAGIATQT-------------------------------KVEARLR 112

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++   +  ++  E+++  V ++  +     I++ ++A+    D          G    ++
Sbjct: 113 EQEGKKRWDYEREEFINKVWEWK-EEFGGTIQNQMRAIGDSVDWSRERFTLDDGLSRAVQ 171

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            I   L  +G +Y+       S   +    D
Sbjct: 172 TIFKTLYDEGMIYQANRLVNWSPVLETAVSD 202


>gi|227833699|ref|YP_002835406.1| Valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454715|gb|ACP33468.1| Valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 923

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 32/211 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K L    V+   +  +   +    +I     N TG +H+GH     + D++    
Sbjct: 35  PQAVEKDLYEGWVNAGYFTPDASSEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRK 94

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    T                                V   L 
Sbjct: 95  RMQGYATLWLPGADHAGIATQT-------------------------------KVEARLR 123

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++   +  ++  E+++  V ++  +     I++ ++A+    D          G    ++
Sbjct: 124 EQEGKKRWDYEREEFINKVWEWK-EEFGGTIQNQMRAIGDSVDWSRERFTLDDGLSRAVQ 182

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            I   L  +G +Y+       S   +    D
Sbjct: 183 TIFKTLYDEGMIYQANRLVNWSPVLETAVSD 213


>gi|218672951|ref|ZP_03522620.1| leucyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 274

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNADPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|332559307|ref|ZP_08413629.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332277019|gb|EGJ22334.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 847

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  ++   +G+   R+   +     +E     P+G +H+GH R   +GD +A   A +G+
Sbjct: 12  RWQAAWDAAGVFTARHDPARPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARQKAAAGF 70

Query: 160 EV 161
            V
Sbjct: 71  SV 72


>gi|271498965|ref|YP_003331990.1| valyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270342520|gb|ACZ75285.1| valyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 951

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  N        +I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPHDIEQPLYEHWEQQGYFKPNGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|254884512|ref|ZP_05257222.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319640796|ref|ZP_07995509.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254837305|gb|EET17614.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317387608|gb|EFV68474.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 1162

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 QYGSDPLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|221640308|ref|YP_002526570.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782511|sp|B9KMH8|SYL_RHOSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221161089|gb|ACM02069.1| Leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 847

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  ++   +G+   R+   +     +E     P+G +H+GH R   +GD +A   A +G+
Sbjct: 12  RWQAAWDAAGVFTARHDPARPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARQKAAAGF 70

Query: 160 EV 161
            V
Sbjct: 71  SV 72


>gi|77464417|ref|YP_353921.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123744224|sp|Q3IZL4|SYL_RHOS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77388835|gb|ABA80020.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 847

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  ++   +G+   R+   +     +E     P+G +H+GH R   +GD +A   A +G+
Sbjct: 12  RWQAAWDAAGVFTARHDPARPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARQKAAAGF 70

Query: 160 EV 161
            V
Sbjct: 71  SV 72


>gi|298293749|ref|YP_003695688.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930260|gb|ADH91069.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 870

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +        GI   RN   +     +E     P+G +H+GH R  V+GD +A  
Sbjct: 8   AREAEPRWQKIWDERGIFRTRNDDPRPKYYVLEMF-PYPSGRIHIGHGRNYVMGDVVARF 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KRMKGFNV 74


>gi|237815568|ref|ZP_04594565.1| glutamyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237788866|gb|EEP63077.1| glutamyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 501

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 50/302 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 31  KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 87

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 88  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 146

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 147 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 183

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 184 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 235

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 236 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 280

Query: 422 VR 423
            R
Sbjct: 281 YR 282


>gi|167561854|ref|ZP_02354770.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 945

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 96/306 (31%), Gaps = 35/306 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVERAGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +        +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGCAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         +  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-SEWLEIDRYAVAFAAQLQ--TELL 720

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA- 567
            +     E + +   L    S    G +    ++       A+N      +  L H    
Sbjct: 721 AH-YEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASN-ARRSAQTALYHVTQG 778

Query: 568 --SIIN 571
              ++ 
Sbjct: 779 LLRVLA 784


>gi|162147547|ref|YP_001602008.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545652|ref|YP_002277881.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786124|emb|CAP55706.1| Valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533329|gb|ACI53266.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 898

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 68/260 (26%), Gaps = 42/260 (16%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N   SP  +   L +       +  +         I     N TG +HVGH     + D
Sbjct: 2   LNKSFSPGEIESALYAEWERSGAFSADPHSSAQPYTIMIPPPNVTGTLHVGHALTMTLQD 61

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G +   +   + AG     +                               
Sbjct: 62  TLIRWRRMQGRDTLWQPGTDHAGIATQMVVERTL-------------------------- 95

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                  K      +   E +   V  +  ++    I   L+ L    D          G
Sbjct: 96  ------QKEGISRRDLGREAFEQRVWQWKAESG-GGITTQLRRLGASLDWPRERFTMDDG 148

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLF-RSTMVGDD 319
               +R++   L +QG +Y            +    D        +  L + R  + GD 
Sbjct: 149 LSQAVREVFVTLYQQGLIYRDRRLVNWDPAFRSAISDLEVDNREVQGSLWYIRYPVEGDA 208

Query: 320 VDRPLLKSDGSYTYFAADLA 339
             R +  +         D+A
Sbjct: 209 AGRTITVATTRPETLLGDMA 228


>gi|326799867|ref|YP_004317686.1| valyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326550631|gb|ADZ79016.1| Valyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 881

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 62/213 (29%), Gaps = 39/213 (18%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +    L        ++ R++        I     N TG +H+GH     + D L    
Sbjct: 14  DKWYAYWL------EKKFFRSIPDGREPYTIVMPPPNVTGVLHMGHMLNNTIQDVLIRRA 67

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + A   I T A  V    ++ +  +D           +LK+   E  
Sbjct: 68  RMQGKNACWVPGTDHA--SIATEAKVVAMLKERGINKSDIT------REEFLKY-AWEWK 118

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY                          II D L+ L    D   +           + 
Sbjct: 119 EKYG------------------------GIILDQLRKLGASCDWDRTRFTMEPDLSDAVI 154

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           D   +L ++GY+Y GI         +    D +
Sbjct: 155 DTFIHLYKKGYIYRGIRMINWDPQGKTAVSDEE 187


>gi|171920261|ref|ZP_02691263.2| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902665|gb|EDT48954.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 874

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 80/220 (36%), Gaps = 32/220 (14%)

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV--KRLEAVAAAVSEKKAQINV 383
            S G +        Y    ++R F   + V G D   +    R+   +  + EKK   +V
Sbjct: 452 FSSGMWPLLTTKWNYNSHFFDRYFPTSLIVTGMD-ILFFWVSRMMNFSQYLVEKKPFKDV 510

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           L+  L+   RD    KMSK  G+ I    ++D+ G D++R          E L+F   ++
Sbjct: 511 LIHGLI---RDSQGRKMSKSLGNGIDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERL 567

Query: 443 KEQSKE-----NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                      N   Y++       ++       F D+D        I  E    T E+ 
Sbjct: 568 GANWNYLNKIWNIAKYIENLDEINDNL------NFEDVDKFCDVNKWILTELSKLTLEIN 621

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHW 536
              ++ +Y  V+              YLYD + + F  ++
Sbjct: 622 --KNMDKYNLVVA-----------TKYLYDFIWNTFASYY 648


>gi|167580110|ref|ZP_02372984.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 945

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 85/253 (33%), Gaps = 30/253 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQQGIEAWQTLDARELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+    ++ +P E   +     +    A+    +
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDY---AKDALPAEQWLEIDRYAVAFS-AQLQTEL 719

Query: 510 ENATIAQEPYKLA 522
                  E + + 
Sbjct: 720 LAHYEKYEFHPVV 732


>gi|78776346|ref|YP_392661.1| glutamyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|118595567|sp|Q30UA5|SYE1_SULDN RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|78496886|gb|ABB43426.1| glutamyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 462

 Score = 43.4 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 133/420 (31%), Gaps = 79/420 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +   + +PTG +H+G  R A+     A      G  + R   I D     N       
Sbjct: 1   MIVTRFAPSPTGYLHIGGLRTALFSYLWAR--KNGGKFLLR---IEDTDKARN------S 49

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               +A+    + L   +   +  +    ++   Y  +LL+          + Y  +  +
Sbjct: 50  QEAAEAIVKAFNWLGLEHDGEITYQSQRDDIYAIYVKQLLDEG-----KAYRCYMSREEL 104

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R+   A   +        DF    P  +  +I             +  P S      
Sbjct: 105 DALRETQMANKERTKYDGKYRDFDGTPPDGVDSVI------------RIKAPLSGEIIVR 152

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  +  ++F++  + DD    + ++DGS TY   +       +  G   +I   G DH  
Sbjct: 153 DGVKGDVVFKAEDILDDF--VIARADGSPTY---NFVVAIDDHLMGVTEVIR--GDDHLS 205

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD-S 421
              +   +  A+     +        V +  +    K+SKR G    +     E+G   +
Sbjct: 206 NTPKQIVIYEALGFDVPKFYH-----VPMIHNSEGKKLSKRDGATDVMA--YKEMGYTPA 258

Query: 422 VRFMMLWR---KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
                L R    N +   F   +++E                 ++I R A     +    
Sbjct: 259 ALLNFLVRLGWSNGDQEIFSMDEMRELFDP-------------KNINRSASIYNTE---- 301

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYP---------RVIENATIAQEPYKLAFYLYDLA 529
               + +      +T   +L   L EY           ++ +A   +     A  L +LA
Sbjct: 302 --KLDWLNSHYIKNTPNQELAKMLEEYNLTIASHDKKEILLDALKER-----AKTLKELA 354


>gi|238882416|gb|EEQ46054.1| valyl-tRNA synthetase, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 1079

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+                   I K    +I     N TG +H+GH     + DTL     
Sbjct: 127 SWYSWWEKQGFFEPELTANGEIKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNR 186

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W  +Q   ++        Y          E  +
Sbjct: 187 MQGKTTLFIPGFDHAGIATQSVVEKQIWAKEQKTRHD--------YGREKFIEKVWEWKE 238

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y                           I++  K L   +D    +   +      + +
Sbjct: 239 EYHQR------------------------IKNQFKKLGSSYDWSREKFTLNPDLSQAVTE 274

Query: 276 IIDNLARQGYVYEG 289
               +   G +Y  
Sbjct: 275 AFVRMHEDGTIYRA 288


>gi|115376535|ref|ZP_01463768.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822062|ref|YP_003954420.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115366468|gb|EAU65470.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395134|gb|ADO72593.1| Valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 1176

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 58/201 (28%), Gaps = 36/201 (17%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           LS +Y    +     +  +    +           +I     N TG +H+GH   A + D
Sbjct: 7   LSKAYEPTEVENRWYAWWLERNYFHAEATSDKPPFSIVLPPTNVTGSLHLGHALTATIED 66

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L      SGY       I+ AG     +      + ++   ++            +LK 
Sbjct: 67  ILIRWKRMSGYNALWMPGIDHAGIATQMVVEKELKKTEKKSRHDLG-------RQEFLKR 119

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V  +  DKY                           I D  K L    D           
Sbjct: 120 V-WQWKDKYGRR------------------------IGDQHKFLGASLDWDRERFTMDEK 154

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
             + +R++   L  +G +Y  
Sbjct: 155 SSAAVREVFVRLHEEGLIYRA 175


>gi|126700875|ref|YP_001089772.1| valyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252312|emb|CAJ70153.1| valyl-tRNA synthetase [Clostridium difficile]
          Length = 888

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L    +    +            I     N TG +H+GH     + D L 
Sbjct: 9   TYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALDHTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE    +++   G    ++A  V                           V +
Sbjct: 69  RWKRMDGYEA---FWL--PGTDHASIATEVK--------------------------VVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  +          E++L    ++        I + LK L    D          G   
Sbjct: 98  RIKKQEGKTKYEIGREEFLKRAWEWK-DEFGGKISNQLKQLGDSCDWDKERFTMDEGCNE 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +   +L  +G++Y G
Sbjct: 157 AVIEFFVSLYEKGHIYRG 174



 Score = 38.4 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V+   A    ++EK    + +L     L RD    KMSK  G+ I    ++++ G+D++R
Sbjct: 496 VRMAFAGMFCMNEKP--FDHVLVHG--LVRDSQGRKMSKSLGNGIDPLEIIEQYGADALR 551

Query: 424 FMMLW-RKNSELLDFDFCKVKEQSK 447
           F +         + F   +V+    
Sbjct: 552 FTLTTGNSPENDMRFYMERVEFARN 576


>gi|56477955|ref|YP_159544.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821070|sp|Q5P221|SYI_AZOSE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56313998|emb|CAI08643.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 939

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 19/212 (8%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+         A+  +     +L    V    DG   KMSK  G+ +  +
Sbjct: 571 LYLEGSDQHRGWFHSSLLTGCAIDGRAPYDALLTHGFVV---DGQGKKMSKSKGNVVAPQ 627

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V D++G++ +R  +     S  L      +    +          Y R R+  R     
Sbjct: 628 EVSDKLGAEILRLWVAATDYSGELTISKEILDRVVE---------VYRRLRNTLRFLLAN 678

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS- 530
             D D       V  +  + D   L L   L      +       E +K+   L + A+ 
Sbjct: 679 TGDFDIARDGVPV-EEWLDIDHYALALTRRLQ---EQVTGDYARFEFHKIVQALQNFAAE 734

Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                +    ++ RL   +A++R     +  L
Sbjct: 735 DLGAFYVDILKD-RLYTTKADSRARRAAQTAL 765


>gi|332519420|ref|ZP_08395887.1| glutamyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045268|gb|EGI81461.1| glutamyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 502

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 94/290 (32%), Gaps = 44/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTGP+H+G  R A+     A       ++     +  R     E YI DA    N  
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKHNGTFVLRIEDTDQNRYVEGAEQYIIDALNWCNI- 68

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                          D    +    G Y +   K L   Y+ +L+      +      + 
Sbjct: 69  -------------PFDEGPGKNEKFGPYRQSERKHLYKDYAEQLIASGNAYY-----AFD 110

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKS 296
               +   R D +A      I+   +     +   + ++ +         Y      P+ 
Sbjct: 111 TAQSLDAHRKDHEANGKTF-IYNWHNRLKLDNSLALSQEEVQAKLDNSDDYVIRFKSPQD 169

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +T    D+ R  +   + ++    D+ L KSDG  TY    LA     +     ++I   
Sbjct: 170 QTLHLKDIIRGDIKIDTNILD---DKVLFKSDGMPTYH---LANIVDDHLMEISHVIR-- 221

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +    +     +  A      +   L   L    +     K+SKR GD
Sbjct: 222 GEEWLPSLALHMQLYTAFGWDAPEFAHLPLILKPTGKG----KLSKRDGD 267


>gi|329962854|ref|ZP_08300739.1| isoleucine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529411|gb|EGF56324.1| isoleucine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 1162

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMIFDSTAYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|150005574|ref|YP_001300318.1| isoleucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|149933998|gb|ABR40696.1| isoleucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 1162

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLV---LDKNGNKMSKRLGNAVDPFGAIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V E  ++          F+  YA
Sbjct: 727 QYGSDPLRWYMITNSSPWDNLKFDTDGVDEVRRKFFGTLYNTYSFFALYA 776


>gi|149277070|ref|ZP_01883212.1| isoleucine--tRNA ligase [Pedobacter sp. BAL39]
 gi|149231947|gb|EDM37324.1| isoleucine--tRNA ligase [Pedobacter sp. BAL39]
          Length = 1131

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 37/183 (20%)

Query: 357 GSDH-SGYVKRLEAVA----------AAVSEKKAQINVLLCELVR--LYRDGMPIKMSKR 403
           G D   G+   L A+A           A++ K     V    +V   L  D    KMSKR
Sbjct: 625 GVDQTRGWFFTLHAIAVMLSESSEEIKAINTKVGNPGVAFKNVVSNGLVLDKNGNKMSKR 684

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQ 455
            G+ +     ++   +D+ R+ M+   +  + L F+   + E  ++          F+  
Sbjct: 685 LGNGVDPFSTIETYSADATRWYMISNASPWDNLKFNMDGLDEVRRKFFGTLYNTYAFFAL 744

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA                  + D+     + + SE D   L L+  L      ++ +  A
Sbjct: 745 YANI-------------DKFEIDVNNLTPVAERSELDRWILSLLQALI---TEVDESYNA 788

Query: 516 QEP 518
            EP
Sbjct: 789 YEP 791


>gi|116490881|ref|YP_810425.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116091606|gb|ABJ56760.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 829

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  YF   +     K     + +       +YV G++H+     Y +        +   
Sbjct: 520 GSSWYFLRYIDPHNDKVLADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGIV 579

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             +          +       KMSK  G+ +    +VD  G+D++R   +
Sbjct: 580 PTKEPFQKLVNQGMILGTNHEKMSKSKGNVVNPDEIVDSYGADALRVYEM 629


>gi|50085977|ref|YP_047487.1| valyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81392408|sp|Q6F8F0|SYV_ACIAD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49531953|emb|CAG69665.1| valyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 971

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 62/220 (28%), Gaps = 37/220 (16%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+     P+ + +    I      +     G+G    I     N TG +H+GH     + 
Sbjct: 15  NIATTYDPTDIERKWYQIWEEKGYF--KPSGQGDSFCIMIPPPNVTGSLHMGHGFNNAIM 72

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G                           +  L+   +D        V  +
Sbjct: 73  DALTRYNRMMG---------------------------KNTLWQPGTDHAGIATQMVVER 105

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  +   ++      F ++ W    K+ S   + K IR     L    D          
Sbjct: 106 QLAAQNISRHDLGREQFIDKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDD 159

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           G  + ++++   L   G +Y G          Q    D +
Sbjct: 160 GLSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLE 199


>gi|49475427|ref|YP_033468.1| glutamyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|67461958|sp|Q6G3V8|SYE1_BARHE RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|49238233|emb|CAF27443.1| Glutamyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 483

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 104/309 (33%), Gaps = 60/309 (19%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I   + +PTG +H+G  R A+     A              +          + L +
Sbjct: 1   MPVITRFAPSPTGFLHIGGARTALFNWLYAK-------------HTG------GKMLLRI 41

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA- 240
               ++                + L + G  ++    +E      E+ +   K Y   A 
Sbjct: 42  EDTDRERSTEAAVKAIIDGLHWMGLSYDGDPISQFERAERHRQVAEQLVKDGKAYYCYAS 101

Query: 241 --MMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
              +  IR++ +A     ++D    E D  +  P  I+ +I             +  P+ 
Sbjct: 102 PEELAEIRENARAEGRPPRYDGRWRERDISKA-PKDIKPVI------------RIKAPQD 148

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
             T   D  +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I   
Sbjct: 149 GETIVHDRVQGDVRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGVTHIIR-- 200

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G DH     R   +  A+      I V+    +    +G   K+SKR G           
Sbjct: 201 GDDHLTNAARQTIIFNAMGWD---IPVMAHIPLIHGENGA--KLSKRHG----------A 245

Query: 417 VGSDSVRFM 425
           +G  + R M
Sbjct: 246 LGVAAYRKM 254


>gi|325971778|ref|YP_004247969.1| glutamyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027016|gb|ADY13775.1| glutamyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 494

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 79/475 (16%), Positives = 149/475 (31%), Gaps = 87/475 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  H+G  R A+     A     +G +        D     +     ++      
Sbjct: 8   APSPTGLQHIGGVRTALFNYFFAR---ANGGKFILRVEDTDRERYSDESLQDLYDTLSWL 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y++    EL   Y+ +L+    + +        ++A+    +++
Sbjct: 65  GIAWDEGPVVGGPCGPYIQSERFELYRDYAQQLVR-DGKAYYCYCTPERLEAVRLKQQEE 123

Query: 249 LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              +    +H + +SE D        I+ +I             L  P    T   D+  
Sbjct: 124 KSEVQGYDRHCLHLSESDHANYAEQGIQPVI------------RLKVPTDGKTTFHDVLM 171

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +  R+  V    D  LLKSDG  TY    LA     +  G  ++  +   +       
Sbjct: 172 GDITRRNRDVSP--DPILLKSDGFPTYH---LANVIDDHLMGITHI--MRAQEWIPSGPL 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------HVV 414
              +  A   +      L    + + +DG   K+SKR G                  + V
Sbjct: 225 HILLYEAFGWEPPMYCHL---PMVMGKDGQ--KLSKRHGSTSVRDFKEKGYLPEALMNYV 279

Query: 415 DEVG------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             VG             D  +   L + N     FD+ K+   + +         Y R +
Sbjct: 280 SMVGWSYDGQREFFSKEDLEQVFCLEKINKAPGVFDYKKLDWFNGQ---------YIRQK 330

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL-QLIV-HLAEYPRVIENATIAQEPYK 520
           S       + P ++   F    + +E +    E+ +++   L     V++          
Sbjct: 331 SDEELMALLLPYMNKAQFLPASLSEEQKTKFLEITKVVKDRLKVLGDVVD---------- 380

Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
           L  +L++                 L    A   +L++  L L  A   ++  G  
Sbjct: 381 LTRFLFE-----------TPSYDDLSLFAAKGVELSVAALALQRA-YDVLKQGFE 423


>gi|311110527|ref|ZP_07711924.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065681|gb|EFQ46021.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 930

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 106/321 (33%), Gaps = 58/321 (18%)

Query: 214 ADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
            DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD   
Sbjct: 421 VDKFRDQILAEIEKANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPI 479

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  +     ++G            + EG           + + D   + F S   
Sbjct: 480 VTPETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDS--- 536

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + + DG                  GF   +Y+ GSD   G+       + AV+
Sbjct: 537 GSSWAGVMKERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVT 579

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +
Sbjct: 580 GKAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDV 636

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +++ ++         +Y + R+  R       D D                  E
Sbjct: 637 AVSQDILRQSAE---------SYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYME 687

Query: 496 LQLIVHLAEYPRVIENATIAQ 516
           ++L        R+IE A  A 
Sbjct: 688 IKL-------NRLIEEAIEAY 701


>gi|261253629|ref|ZP_05946202.1| glutamyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937020|gb|EEX93009.1| glutamyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 475

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 100/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + +++ IR +
Sbjct: 61  MQWMGLEWNEGPYFQSKRFDRYNEMVDKL------LAEDKAYKC---YASKELLEEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  N A + G  +      PK  +    D  R 
Sbjct: 112 QEAA----------KEMPRYDANHPKVVAANTAAKEGDAFVVRFRNPKEGSVVFEDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A + V     + L  DG   K+SKR G  
Sbjct: 214 INIYEALG---APVPVFAHCAMILGDDGA--KLSKRHGAV 248


>gi|45359037|ref|NP_988594.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74553693|sp|Q6LX78|SYI_METMP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|45047912|emb|CAF31030.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 1034

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G+D  + +     A++A V +  +    ++        D    KMSK  G+ ++   V +
Sbjct: 558 GNDQVTKWFYSQHALSAVVFDDTSYEKCMMHGF---TLDETGEKMSKSLGNIVSPDDVTE 614

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G+D +RF +L    + E L F + ++ E        +  YA++    +          
Sbjct: 615 QYGADVLRFYLLSANKAWEDLRFSYSEMDETRSMLNTLWNSYAFSANYMVL--------- 665

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYKLAFYLYDLA---- 529
              D F  N    +   D         L+    V + A  A E P+    ++Y  A    
Sbjct: 666 ---DDFVPNNEYFKHVKDEDAW----ILSRINTVAKEAVEALEKPHL---HVYTWALRDF 715

Query: 530 --SVFHGHW 536
             + F   +
Sbjct: 716 ILNDFSRWY 724


>gi|42528163|ref|NP_973261.1| isoleucyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81411431|sp|Q73JB2|SYI_TREDE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|41819208|gb|AAS13180.1| isoleucyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 1100

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 29/226 (12%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +AAA+ ++ A  N ++  LV L  DG   KMSK   ++     V+ 
Sbjct: 586 GLDQTRGWFYTLTILAAALFDEPAFKNCIVNGLV-LAEDGK--KMSKSLRNYTDPNEVIK 642

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCK---------VKEQSKENPVFYVQYAYARCRSIFR 466
           + G+D++R  ++     +  D  +           +      +  FY+ YA         
Sbjct: 643 QFGADALRLFLMNSNVVKADDLKYSDEGVRDVLKGILIPFWNSYSFYITYANIDGVKPPH 702

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK----LA 522
            AK    D   + F   +      +  S  +    +A+    +  A    +  +    + 
Sbjct: 703 NAKVDGKDEGVEEFLAKLNNPLDLWILSVTE--KLVAD----VTEALDKYDLSQAIPPMV 756

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            Y+ DL    +  +   R + R  +   N+   +     L  A+  
Sbjct: 757 EYI-DL---LNNWY--IRRSRRRFWKSENDGDKSQAYETLYRALKK 796


>gi|327490158|gb|EGF21946.1| methionine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 665

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 113/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +   +   +  +LL+   +K++    DY  + +  +    L  
Sbjct: 66  -------GISPQAYVDSMAVGVKKLW--KLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-------------GSD-HSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYR 393
             ++IYV              G D H+ Y K        +  +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D++R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMR 339


>gi|325288365|ref|YP_004264546.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963766|gb|ADY54545.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 655

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 106/339 (31%), Gaps = 66/339 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P    H+G     +  D +A L    G +V                        Q+ +  
Sbjct: 12  PNASPHIGTAYTTIAADAMARLRRMMGDDVY--------------FLTGTDENAQKIVRT 57

Query: 192 NDSD--LPEGYYPGVYLKHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIR 246
            +S    P  Y   +  K      + D  + + +   EE+   +V+ +  +      I +
Sbjct: 58  AESKGMAPLDYVDNIVAKFKELWRILDISNDDFIRTTEERHAKVVQHFFTKLFEQGDIYK 117

Query: 247 DDLKALNIQ-HDIFISEDDFHRGDPSPIR--DIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            + +       + F +E+    G    +     ++ L  + Y +       +     K +
Sbjct: 118 SEYEGWYCTPCETFWTENRLVEGRCPNLDCGREVELLKEESYFFRLSKYQDRLLEYIKAN 177

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG----FD--NMIYVM- 356
            +  Q + R   +   ++  L            DL   +  +E G    FD  +++YV  
Sbjct: 178 PEFIQPVSRRNEMIKFIESGL-----------EDLCVTRTTFEWGIQVPFDPKHVVYVWL 226

Query: 357 GS-----------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD----------- 394
            +           D   Y +   A    V +   + + ++  ++ +  +           
Sbjct: 227 DALINYISALGYPDGEKYQRYWPADLHLVGKDIVRFHTVIWPIILMAMEIPLPKKVFGHG 286

Query: 395 ----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                   K+SK  G+      ++   GSD +R+ +L  
Sbjct: 287 WFMSKEGGKISKSRGNVQDSFELIARYGSDPIRYFLLKE 325


>gi|322789705|gb|EFZ14871.1| hypothetical protein SINV_01736 [Solenopsis invicta]
          Length = 510

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 103/301 (34%), Gaps = 51/301 (16%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            K   V + F + +PTG MH+G  R A+     A   + +G  + R   I D   Q  T+
Sbjct: 19  FKKHHVRVRF-APSPTGHMHLGGLRTAMYNYLFAR--SNNGTFILR---IEDT-DQTRTV 71

Query: 178 ALSVFWRYQQALYNN---DSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEE 227
             ++       L+     D D   G   G YL+    EL  +   +LLN       F  E
Sbjct: 72  PGAIEKLQDDLLWAGIIPDEDPIRGGPVGPYLQSSRLELYKEQVLKLLNNGSAYYCFCTE 131

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           K L +++  +++      R   K  N        E              +  + R+   Y
Sbjct: 132 KRLELLRKEAMK-----CRQVPKYDNRCRHFTKEE--------------VKEMLRKNSTY 172

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                  K  +  +   D         +   + D  ++KSDG  TY  A++       + 
Sbjct: 173 ---CIRFKLPSISEAFHDIVYGEVLHDVTKSEGDPVIIKSDGYPTYHFANV------VDD 223

Query: 348 GFDNMIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            F  + +V+ G +      +   +  A           +   + L  +    K+SKR  D
Sbjct: 224 HFMEISHVLRGVEWQISTPKHIMLYKAFGWDPP-----VYGHLPLILNADGSKLSKRQND 278

Query: 407 F 407
            
Sbjct: 279 I 279


>gi|317496419|ref|ZP_07954771.1| leucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913434|gb|EFV34928.1| leucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 809

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 15/114 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K     + +       +Y+ G++H+     Y +    V   +   
Sbjct: 495 GSCWYYLRYIDPHNDKMFADPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGLV 554

Query: 378 KAQ--INVLLCELVRLY--RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            ++     L  + + L   +DG P KMSK  G+ +    ++   G+D++R   +
Sbjct: 555 PSREPFQKLFNQGMILAEGKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVYEM 608


>gi|260893645|ref|YP_003239742.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865786|gb|ACX52892.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 824

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + K           Y         K     +   P+G +H+GH R   +GD +A     
Sbjct: 9   AVEKKWRRRWEEEDLYAVPDFEDKPKYYCLEMFPYPSGKLHMGHVRNYAIGDVVARFKRM 68

Query: 157 SGYEV 161
            GY V
Sbjct: 69  QGYSV 73


>gi|254477744|ref|ZP_05091130.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031987|gb|EEB72822.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 853

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 34/268 (12%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y++P    +   +   +GI        K     +E     P+G +H+GH R   +GD +A
Sbjct: 4   YVAPEIEARWQDAWEKAGIFQANRTDDKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVA 62

Query: 152 S--------LMAFSGYEVTR---EY-------------YIN--DAGAQINTLALSVFWRY 185
                    ++   G++      E              Y N  D   Q+  L LS+ W  
Sbjct: 63  RYKLSTGHNVLHPMGWDAFGMPAENAAMASGGHPKDWTYKNIADMRGQMKPLGLSIDWSR 122

Query: 186 QQALYNND------SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           + A  + +      +   +    G+  +       D     +L   + +     +  ++ 
Sbjct: 123 EFATCDPEYYGQQQALFLDFLEKGLVYRKNAVVNWDPVDMTVLANEQVENGRGWRSGALV 182

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
              ++ +   K ++   +  +   D     P+ +R + +N   +    +           
Sbjct: 183 ERRELTQWFFK-ISDYSEELLDALDSLENWPAKVRLMQENWIGKSRGLQFSFERTDGGEA 241

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +    R   L  ++ VG   D P+ K+
Sbjct: 242 IEVYTTRPDTLMGASFVGISPDHPIAKA 269


>gi|118590687|ref|ZP_01548088.1| isoleucyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436663|gb|EAV43303.1| isoleucyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 1000

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 33/251 (13%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-----VDRPLLKSD 328
           +D  + L  +  V + I     S+       D  +  F       D      D   +  D
Sbjct: 540 KDTSEVLKDEA-VNKRIYDAFVSEGADAWFADGARERFLGNDYKADEWDMVTDILDVWFD 598

Query: 329 GSYTYFA-----ADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQI 381
              T+        DLA  K K + G D ++Y+ GSD   G+      +  +   +  A  
Sbjct: 599 SGSTHAFVLEQREDLA-PKRKTDGGEDYVLYLEGSDQHRGWFHSS--LLESCGTRGHAPY 655

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           + +L     +  DG   KMSK  G+ +  + V+ + G+D +R  +      E        
Sbjct: 656 DAVLTHGFTMAEDGR--KMSKSLGNQVFPQDVIKQYGADILRLWVASTDYWEDQRLGPEI 713

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +K             +Y + R+  R           +      +P+       E  ++  
Sbjct: 714 IKTSVD---------SYRKLRNTLRWMLGSLAHATGEEVALADMPEL------ERLMLHR 758

Query: 502 LAEYPRVIENA 512
           L+E  ++I  A
Sbjct: 759 LSELDKMIREA 769



 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 50/178 (28%), Gaps = 14/178 (7%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R       K  +        G +H+GH     + D +   M  +GYE     Y+      
Sbjct: 61  REQGKGRKKFVLHDGPPYANGNIHIGHALNKTLKDIVTRSMQMTGYES---NYVPGWDCH 117

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              +   +  +Y+    N D ++P   +     +   +   D    E      E      
Sbjct: 118 GLPIEWKIEEQYRAKGKNKD-EVPINEFRRE-CREFAEHWIDVQRKEFKRLGIEGDWDNP 175

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEG 289
                     II  +L                +RG    +  +++   LA     Y+ 
Sbjct: 176 YLTMRFESEAIIAQELMKFATSG-------QLYRGSKPVMWSVVEKTALAEAEIEYQD 226


>gi|17987120|ref|NP_539754.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17982783|gb|AAL52018.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 501

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 50/302 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 31  KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 87

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 88  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 146

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 147 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 183

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 184 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 235

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 236 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 280

Query: 422 VR 423
            R
Sbjct: 281 YR 282


>gi|325474629|gb|EGC77815.1| isoleucyl-tRNA synthetase [Treponema denticola F0402]
          Length = 1100

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 29/226 (12%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +AAA+ ++ A  N ++  LV L  DG   KMSK   ++     V+ 
Sbjct: 586 GLDQTRGWFYTLTILAAALFDEPAFKNCIVNGLV-LAEDGK--KMSKSLRNYTDPNEVIK 642

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCK---------VKEQSKENPVFYVQYAYARCRSIFR 466
           + G+D++R  ++     +  D  +           +      +  FY+ YA         
Sbjct: 643 QFGADALRLFLMNSNVVKADDLKYSDEGVRDVLKGILIPFWNSYSFYITYANIDGVKPPH 702

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK----LA 522
            AK    D   + F   +      +  S  +    +A+    +  A    +  +    + 
Sbjct: 703 NAKVDGKDEGVESFLSKLNNPLDLWILSVTE--KLVAD----VTEALDKYDLSQAIPPMV 756

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            Y+ DL    +  +   R + R  +   N+         L  A+  
Sbjct: 757 EYI-DL---LNNWY--IRRSRRRFWKSENDGDKAQAYETLYRALKK 796


>gi|190571143|ref|YP_001975501.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|238064874|sp|B3CLT1|SYL_WOLPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190357415|emb|CAQ54849.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 819

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 33/216 (15%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K +     +  ++  +   K  K  +  +   P+G +H+GH R   +GD +A      G+
Sbjct: 6   KNVEKFYQNKWDFSVSKDSKKKKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGF 65

Query: 160 EVT----------------REYYINDAG----------AQINTLALSVFWR------YQQ 187
           EV                 R+  IN A            Q+ ++ LS  W          
Sbjct: 66  EVLHPIGWDAFGLPAENAARDNNINPAAWTQDNIDNMRTQLKSIGLSYNWDRELSTCEPD 125

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              +      +    G+  +       D     +L   +       +  +V    K+ + 
Sbjct: 126 YYKHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLFQW 185

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
            LK  +   D+        +  P  ++ + +    +
Sbjct: 186 FLKITDFAEDLLHCLQSL-KNWPEKVKTMQERWIGK 220


>gi|229585079|ref|YP_002843581.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228020129|gb|ACP55536.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 944

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|225851466|ref|YP_002731700.1| valyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646482|gb|ACO04668.1| valyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 1098

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 60/226 (26%), Gaps = 41/226 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +        +    +  +        ++     N TG +H+GH     + D     
Sbjct: 7   KPSEIENRWYKEWLKSAIFTADSSSDKPYFSVVMPPPNVTGSLHIGHALNMTLQDITVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+               +   ++  W                         V    
Sbjct: 67  KRMKGFNTL-------WLPGFDHAGIATQW-------------------------VVTRQ 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +       +   EK++  V ++  +A    I+  +++L    D          G    +
Sbjct: 95  LEAEGINKFDLGREKFIEKVWEWVPKA-RDTIKKQIESLGASCDWTRQRFTLDEGFARAV 153

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLF 311
           R+    L R+G +++               S    +   +R  L +
Sbjct: 154 REAFFRLYREGLIFKAPYIVNWDPKDRTAISDLEVEYKEERGNLWY 199



 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 126/320 (39%), Gaps = 54/320 (16%)

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS-----TMVGDDVDRP 323
           + +   +II+++ R+   Y  +          K + D     F S       +G   D  
Sbjct: 620 ETNNTFNIIEDIIRENEYYIELRCEKCGSHNLKQEDDVLDTWFSSALWPFGTLGWPEDLK 679

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            LKS     Y  + L         GFD +I+         V R+  +     ++K   +V
Sbjct: 680 DLKS----FYPTSLLIT-------GFD-IIFFW-------VARMIMMGMHFMKEKPFSDV 720

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            +  LV   RD    KMSK  G+ I    ++++ G+DS+RF  L    ++  D    ++ 
Sbjct: 721 YIHALV---RDEKGEKMSKTKGNVIDPLDMIEKYGADSLRFT-LAALAAQGRDI---RLS 773

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHL 502
           E+  E       Y +     I+  +K +  +L+  +   N+I +      S E + I+ L
Sbjct: 774 EKRIEG------YKHF-ANKIWNASKFVLTNLEKYMVNSNIINEVKTLSLSYEDRWILTL 826

Query: 503 AEYPRVIENATIAQEPYKLAFY---LYDLASVF--HGHWSHGRENPRLRFVQANNRKLTM 557
            +    I+ AT A E Y+   Y   LYD    F  H +     E  + R  +  +++   
Sbjct: 827 LQ--ETIDKATKALEDYRYNDYANILYD----FFWHEYCDWYLEFTKERIYKGTDQEKKT 880

Query: 558 MRLQLVHAVASIINSGLNII 577
               LV+    +++  L ++
Sbjct: 881 ALSVLVY----VLDKTLRML 896


>gi|224537793|ref|ZP_03678332.1| hypothetical protein BACCELL_02676 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520613|gb|EEF89718.1| hypothetical protein BACCELL_02676 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 508

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 93/279 (33%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 14  APSPTGALHIGGVRTALYNYLFARQH---GGDMIFRIEDTDSNRFVPGAEEYILESFKWL 70

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL   ++ ++       + A    I   
Sbjct: 71  GIPFDEGVSFGGKYGPYRQSERREIYKKYVKVLLEN-DKAYIAFDTPEELDAKRAEI--- 126

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L  +G  Y        ++     D+ R +
Sbjct: 127 -----ANFQYDASTRMQMRNSLTLSKEEVDALIAEGKQYVVRFKIEPNEDVHVNDLIRGE 181

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 182 VIINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 233

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 234 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 270


>gi|154495149|ref|ZP_02034154.1| hypothetical protein PARMER_04197 [Parabacteroides merdae ATCC
           43184]
 gi|154085699|gb|EDN84744.1| hypothetical protein PARMER_04197 [Parabacteroides merdae ATCC
           43184]
          Length = 1141

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 86/240 (35%), Gaps = 27/240 (11%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
           E     +   SV+ +   I   +KA  +       E  F  G+ +   +  + +      
Sbjct: 534 EDGAEEICIGSVEELYNEIEKSVKA-GLMESNPYKELKFQPGEYTK--ENYEKIDLHRPY 590

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            + ++   +S    K + D   + F S  +                Y   +   F  +  
Sbjct: 591 VDDVILVSESGKPMKRETDLIDVWFDSGAMPY----------AQIHYPFENKEIFDDRKV 640

Query: 347 RGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              D +    G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G
Sbjct: 641 YPADFIAE--GVDQTRGWFFTLHAIATMVFDSVSYKAVVSNGLV---LDKNGNKMSKRLG 695

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + +     +++ GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 696 NAVDPFATIEQYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 755


>gi|126463258|ref|YP_001044372.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166231636|sp|A3PMN4|SYL_RHOS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126104922|gb|ABN77600.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 847

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +  ++   +G+   R+   +     +E     P+G +H+GH R   +GD +A   A +G+
Sbjct: 12  RWQAAWDAAGVFTARHDPARPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARQKAAAGF 70

Query: 160 EV 161
            V
Sbjct: 71  SV 72


>gi|332018089|gb|EGI58703.1| Methionyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 547

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 112/350 (32%), Gaps = 50/350 (14%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +   K     I +V+A P    H+GH   AV+ D +       G++       ++ G +I
Sbjct: 17  SSQNKYITTPIFYVNAGP----HIGHLYSAVLADAIVRYNNMLGHQTFFTTGTDEHGNKI 72

Query: 175 NTLALSVFWRYQQALYNNDSDLPE--GYYPGVY---LKHVGKELADKYSSELLNFPEEKW 229
              A +      +          E    +   Y   ++   K+  D          E   
Sbjct: 73  KAAAATAGVPNLEYCTRISQQFREMCDKFEVDYSRFIRTTEKQHCDAVYHFWKQLEERGH 132

Query: 230 LPIVK--------------DYSVQAMM----KIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           + + K              D  +        K+I+   ++ NI    +  E+++     +
Sbjct: 133 IYLGKYSGWYCVSDEAFLCDTELVEQRDSTGKVIKVSAESGNIV--EWTEEENYKFRLSA 190

Query: 272 PIRDIIDNLARQG----YVYEGILPPPKSKTTQKCDMD----RKQLLFRSTMVGDDVDRP 323
              D+   L  +      +Y   L     + T   D+     R ++ +      D+    
Sbjct: 191 FQNDLKYWLKDENTVRPALYHKTLSQWIDEGTCLQDLSITRIRNKMPWAIPSPCDESHSI 250

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKA 379
            +  D    Y    L Y    Y+  +   I ++G D    H  Y     A   A+  +  
Sbjct: 251 YVWLDALINYLTV-LGYPNESYKELWPPTIQIIGKDILKFHGIY---WPAFLIAIGLEPP 306

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           +  +        +R     KMSK  G+ I+     ++   + +R+ +L  
Sbjct: 307 KTLLCHAHWTVDHR-----KMSKSKGNVISPFEAANDYSEEGLRYFILRE 351


>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226735066|sp|B5YID4|SYC_THEYD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 487

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 128/370 (34%), Gaps = 56/370 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AVV D +   + + GYEV                              N +D+
Sbjct: 36  HIGHARSAVVFDVIVKYLRYKGYEV--------------------------KFVKNFTDI 69

Query: 197 PEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN-I 254
            +        + V   E+A+KY+ E     +   L I +        + I + ++ +  +
Sbjct: 70  DDKIINRANKEGVSWKEIAEKYTGEYYKDMD--RLGITRADIEPKATEHINEMIEIIQTL 127

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK-----QL 309
            +  +  E     G    +   ++   + G + +  +    S    + D  +K      L
Sbjct: 128 INKGYAYE--IEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVEVDERKKSPLDFAL 185

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYV 364
              S       D P  K  G   +     A         FD  I+  G+D     H   +
Sbjct: 186 WKASKPGEPWWDSPWGK--GRPGWHIECSAMSIKYLGETFD--IHGGGADLIFPHHENEI 241

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
            + EA      +  A+  +     V + ++    KMSK  G+ + +R ++D   ++++R 
Sbjct: 242 AQSEAFT---GKPFAKYWI-HNGFVTINKE----KMSKSLGNVLNIRDLLDIYDAEALRL 293

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            +L       ++F    +KE   E  V  V     R     +   +    ++FD     +
Sbjct: 294 FLLSSHYRSPIEFAHEYIKEA--EATVDRVYSTIMRIEDFEKIEINDKSSIEFDKVKAML 351

Query: 485 IPQESEFDTS 494
              + EF+ +
Sbjct: 352 ENLKPEFEKA 361


>gi|126725543|ref|ZP_01741385.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704747|gb|EBA03838.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 968

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 92/292 (31%), Gaps = 32/292 (10%)

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-------RSTMVGDDVDRPLLKSDGSYT 332
           L R   V   I    + +       D  +  F              D+      S  ++ 
Sbjct: 530 LLRNEEVNTRIAEAFEVEGADAWYKDGAKERFLGGIANPDEFEQVFDILDVWFDSGSTHA 589

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
           +   D A      + G  + +Y+ G+D   G+       +   + +    NV+       
Sbjct: 590 FVLRDRA---DGSDDGIAD-VYMEGTDQHRGWFHSSLLQSVGTTGRAPYRNVVTHGF--- 642

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             D   +KMSK  G+ I    +V + G+D +R  +     +         +K  +     
Sbjct: 643 TLDEKGMKMSKSIGNTIVPETIVKQYGADILRLWVAQTDYTADQRIGAEILKGTAD---- 698

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
                +Y R R+  R     F     D F        +E    E  ++  LA+   V++ 
Sbjct: 699 -----SYRRLRNTMR-----FMLGSLDQFSEADRVDAAEMPELERWVLHRLAQLDEVVQT 748

Query: 512 ATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                +   +   L+  A +     +   R++  + +   +  +    R  L
Sbjct: 749 GYAKFDFQGVFQALFTFATTDLSAFYFDIRKD--VLYCDGDTPERRAARTVL 798



 Score = 40.3 bits (93), Expect = 1.00,   Method: Composition-based stats.
 Identities = 27/229 (11%), Positives = 61/229 (26%), Gaps = 6/229 (2%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            L      GI              +        G +H+GH     + D +       GY+
Sbjct: 38  WLDRWAQIGIYDTLRAKTGRKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGYD 97

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
                YI         +   +  +Y++   N D+ +P   +     K   +   D   +E
Sbjct: 98  AR---YIPGWDCHGLPIEWKIEEQYRKKGKNKDA-VPVNEFRAECRKF-AEGWVDIQRNE 152

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                 E               ++I ++ +   +   ++                    +
Sbjct: 153 FKRLGIEGNWADPYLTMNFHAERVIAEEFQKFLMNGTLYQGSKPVMWSPVEKTALAEAEV 212

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-VGDDVDRPLLKSD 328
                    I    K   T    ++   ++  +T       ++ ++ SD
Sbjct: 213 EYHDKESFTIWVKFKVAQTNNAALEGAHVVIWTTTPWTIPSNKAVVYSD 261


>gi|220928528|ref|YP_002505437.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998856|gb|ACL75457.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 654

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 126/413 (30%), Gaps = 62/413 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S+ P    H+G+    V+ D+ A      GY+V  +   ++ G +I   A   
Sbjct: 9   TTAIAYTSSKP----HIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKAKEA 64

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               ++ +     ++         +  +     DK+     ++ E++   I K    Q  
Sbjct: 65  GISPKEYVDGFAKEIQ-------RICDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYEQG- 116

Query: 242 MKIIRDDLKALNIQ-HDIFISEDDFHRGD----------------PSPIRDIIDNLARQG 284
             I +   + +     + F +      G                    +    D L +  
Sbjct: 117 -DIYKGYYEGMYCTPCEAFFTSSQLVDGKCPDCGRECHPAKEEAYFLKLSKYADRLIQHI 175

Query: 285 YVYEGILPPPKSK----------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
             +   + P   K            Q   + R    +   +  DD     +  D    Y 
Sbjct: 176 NEHPEFIQPESRKNEMMNNFLLAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYI 235

Query: 335 AADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCE 387
                      +  F+      ++++G D    + R   +      ++ +      +   
Sbjct: 236 TGLGFDADGNSDEMFNKFWPADLHLIGKD----ILRFHTIYWPIMLMALEVPLPKQVFGH 291

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQS 446
              L  +G   KMSK  G+ I    +VD  G D+VR+ +L            +  + E+ 
Sbjct: 292 PWLLMGNG---KMSKSKGNVIYADELVDIFGVDAVRYYILHDMPFDNDGVISWELITERI 348

Query: 447 K-------ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
                    N V  V     +  S      ++  D+D +L    +   E+  +
Sbjct: 349 NSDLANVLGNLVNRVIAMTNKYFSGVVNNSNVREDIDNELIELTLKTPETVVE 401


>gi|114331428|ref|YP_747650.1| isoleucyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114308442|gb|ABI59685.1| Isoleucyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 935

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 15/137 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +       A+        +L    V    DG   KMSK  G+ I  +
Sbjct: 566 LYLEGSDQHRGWFQSSLLTGCAIDGYAPYSALLTHGFVV---DGQGYKMSKSKGNVIAPQ 622

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + D +G+D +R  +     S  L      +K   +          Y R R+  R     
Sbjct: 623 KIADTLGADILRLWVASTDYSGELSISDEILKRTVE---------TYRRIRNTLRFLLAN 673

Query: 472 FPDLDFDLFPRNVIPQE 488
               DFD     + PQE
Sbjct: 674 L--ADFDPVTDALPPQE 688


>gi|23502025|ref|NP_698152.1| glutamyl-tRNA synthetase [Brucella suis 1330]
 gi|30173165|sp|Q8G0E8|SYE2_BRUSU RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|23347978|gb|AAN30067.1| glutamyl-tRNA synthetase [Brucella suis 1330]
          Length = 473

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GGDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----ISLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|327309987|ref|YP_004336884.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946466|gb|AEA11572.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 940

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 51/259 (19%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +           +         K  I      P G +H+GH R  ++ D +A      
Sbjct: 6   IEEKWQRRWAEARVFEPTPEPGKPKFFITAAYPYPNGAIHIGHGRTYLIADIMARYHRHK 65

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           G  V     ++    G  I T+A S+     +A+ +              +  V +E   
Sbjct: 66  GLNVLFPMGFHY--TGTPILTVAESIAAGDVRAMEDF-----------KVIYDVPEEELR 112

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K    L              Y      ++ +  +K + +  D               IR 
Sbjct: 113 KMGDPL--------------YLANYFKELSKQYMKKMGLSIDWTREFTTIDPEYQQFIRW 158

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
               L  +G + +G  P             + Q+   +    DD +              
Sbjct: 159 QFKKLYDKGLLVKGRHP--------VGWCPKHQMPVGAHDTKDDKE-------------- 196

Query: 336 ADLAYFKCKYERGFDNMIY 354
            D+  +   Y  G D +IY
Sbjct: 197 PDIGEWTLIYFEGEDGLIY 215


>gi|307297529|ref|ZP_07577335.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916789|gb|EFN47171.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 635

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 113/354 (31%), Gaps = 64/354 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
                H+G     +V D +A     SGY+V   +++         +      R  +A   
Sbjct: 13  INSEPHIGSAYSTIVADVIARYRRLSGYDV---FFLTGTDEHGQKVLNEAIERNVEAQKY 69

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
            D             K + KEL +  +   +   +E  +  V+ +   ++    + +   
Sbjct: 70  CDE-------MAEKFKALWKEL-ELTNDAFVRTTDEYHMKTVQTFVSKLKENGDVYKGKY 121

Query: 250 KALNIQHDIFIS-EDDFHRGDPSP-IRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           +      D     E+D   G   P     +  ++ + Y      Y  IL     +  Q  
Sbjct: 122 EGWYCIPDETFWNEEDLKEGRTCPECGREVKWVSEENYFFRLSKYNDILLRFYKENPQFV 181

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM------ 356
             D ++      +     D  + ++   +     D            +++IYV       
Sbjct: 182 QPDFRRNEMLRILESGLKDLSITRTSFDWGVPMPD----------DPEHVIYVWVDALIN 231

Query: 357 -----GSDHS-GYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDG-------------- 395
                G  H+  + +R   A    + ++  + + ++   + L                  
Sbjct: 232 YLSAIGYPHNIDHFERYWPADVHLIGKEINRFHSIIWPAMLLSAGLPLPKQIYAHGWLTV 291

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              K+SK  G+ I+    V   G+D++R+ +L        D  F +  + S+ N
Sbjct: 292 NGQKISKSLGNAISPVAFVRTYGNDALRYYLLR-------DIQFGRDGDFSETN 338


>gi|262170554|ref|ZP_06038232.1| valyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261891630|gb|EEY37616.1| valyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 953

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|223943775|gb|ACN25971.1| unknown [Zea mays]
          Length = 563

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 88/286 (30%), Gaps = 46/286 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G          D          +V       
Sbjct: 54  APSPTGNLHVGGARTALFNYLFAR---SKGGRFVLRVEDTDLERSTRKSEEAVLADLAWL 110

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +     L  +Y+ +LL+        + + +     ++ +++ 
Sbjct: 111 GLDWDEGPDVGGDFGPYRQSERNSLYKQYAEKLLDSG-----AVYRCFCSSEELEQMKEV 165

Query: 249 LKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            K      +    + S  D            +     +G  Y      PK  + +  D+ 
Sbjct: 166 AKQRQLPPVYMGKWASASDAE----------VQQELEKGTPYTYRFRVPKEGSLKISDLI 215

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYV 364
           R ++ +    +GD     +++S+G   Y                +  + V  +     +V
Sbjct: 216 RGEVSWNLDTLGDF---VIMRSNGQPVY----------------NFCVTVDDATMQISHV 256

Query: 365 KRLEAVA-----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R E         A+  K     +     V L       K+SKR G
Sbjct: 257 IRAEEHLPNTLRQALIYKALGFAMPSFAHVSLILAPDRSKLSKRHG 302


>gi|254168458|ref|ZP_04875302.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622513|gb|EDY35084.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 455

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 116/368 (31%), Gaps = 52/368 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A++ D     + + GY+V     I D   +I              L  +  ++
Sbjct: 36  HIGHARPAILFDVFRRFLEYMGYDVILISNITDVDDKI--------INKANELGKDPIEM 87

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              YY   YLK +                       ++      + K  R   + +N+  
Sbjct: 88  A-HYYAREYLKDM---------------------DALRVRRANIIPKATRHIEEIINLIK 125

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFR 312
            +      +  G    +   +      G +    +    +    + +  ++      L++
Sbjct: 126 TLVDKGYAYESG--GDVYFSVKKFKDYGKLSHRKIEDMVAGARVEVNEKKRDPLDFALWK 183

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRL 367
           ++  G+   +    S G   +     A          D  I+  G+D     H   + + 
Sbjct: 184 ASKPGEPSWQSPWGS-GRPGWHIECSAMSMNYLGPTLD--IHGGGADLIFPHHENEIAQS 240

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           EA        K  ++V L             KMSK  G+   ++  + +  ++ +R M L
Sbjct: 241 EAATGK-PFSKYWMHVGLVRF-------EKEKMSKSIGNVFLIKDFLKKYPAEVLRLMYL 292

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                +  DF    ++E        +  Y   +  ++     +       D   + +   
Sbjct: 293 NSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEGPSEEVEKRIEDSRKKIIASL 352

Query: 488 ESEFDTSE 495
           E +F+T E
Sbjct: 353 EDDFNTRE 360


>gi|153820409|ref|ZP_01973076.1| valyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509045|gb|EAZ71639.1| valyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 189

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|323474877|gb|ADX85483.1| leucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477618|gb|ADX82856.1| leucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 944

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 921

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 110/345 (31%), Gaps = 68/345 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D     L    + KW+P   +  +  M++  R D      +A  +   +F +E+D   
Sbjct: 415 IKDFREDLLKAVEKTKWVPTWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYAENDEPI 473

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                I  + +     G            + EG             + D   + F S   
Sbjct: 474 ITDETIEHVSNLFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFDSGS- 532

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
                + +L+               +   +R  D  +Y+ GSD   G+     + + AV+
Sbjct: 533 ---SHQAVLEE--------------REDLQRPAD--LYLEGSDQYRGWFNSSLSTSVAVT 573

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            +     VL         DG   KMSK  G+ +    V+ ++G+D +R  +        +
Sbjct: 574 GEAPYKGVLSHGF---ALDGEGRKMSKSLGNVVIPEKVMKQLGADILRLWVAS------V 624

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           D+       +  +N +  V   Y + R+ FR       D +    P        +    +
Sbjct: 625 DYQAD---VRVSDNILKQVAEVYRKIRNTFRFLLGNLADFN----PTTDAVAVEDLREVD 677

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             ++V L +    ++ +  + E              F   +    
Sbjct: 678 RYMLVKLNKLIDKVKKSYDSYE--------------FSSIYHAVH 708


>gi|258622805|ref|ZP_05717823.1| Valyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258584993|gb|EEW09724.1| Valyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 953

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|253997805|ref|YP_003049868.1| valyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984484|gb|ACT49341.1| valyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 948

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 55/229 (24%), Gaps = 46/229 (20%)

Query: 93  LSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             P  L         S G         K     I     N TG +H+GH     + D L 
Sbjct: 16  FDPKALESKWYQFWESRGYYAAGMDASKSDNFCILLPPPNVTGTLHMGHGFNQTIMDALT 75

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G     +   + AG   QI                                  V
Sbjct: 76  RYHRMRGDNTLWQPGTDHAGIATQI----------------------------------V 101

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +   D       +   EK+L  V ++  +     I   ++ L    D          G 
Sbjct: 102 VERQLDAQGVSRHDLGREKFLEKVWEWK-EYSGGTITQQMRRLGTSPDWSRERFTMDAGL 160

Query: 270 PSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + +    L  +G +Y G         L    S      D +   + 
Sbjct: 161 NKVVTESFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQDEEDGSMW 209


>gi|227827809|ref|YP_002829589.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227459605|gb|ACP38291.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 944

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|255657212|ref|ZP_05402621.1| valyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451948|ref|ZP_06893663.1| valine--tRNA ligase [Clostridium difficile NAP08]
 gi|296259139|gb|EFH06019.1| valine--tRNA ligase [Clostridium difficile NAP08]
          Length = 888

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 32/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L    +    +            I     N TG +H+GH     + D L 
Sbjct: 9   TYNPKEFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALDHTLQDILI 68

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE    +++   G    ++A  V                           V +
Sbjct: 69  RWKRMDGYEA---FWL--PGTDHASIATEVK--------------------------VVE 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            +  +          E++L    ++        I + LK L    D          G   
Sbjct: 98  RIKKQEGKTKYEIGREEFLKRAWEWK-DEFGGKISNQLKQLGDSCDWDKERFTMDEGCNE 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +   +L  +G++Y G
Sbjct: 157 AVIEFFVSLYEKGHIYRG 174


>gi|170016586|ref|YP_001727505.1| valyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803443|gb|ACA82061.1| Valyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 894

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 66/243 (27%), Gaps = 40/243 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  K L +   +    G     +     I     N TG +H+GH     + D +    
Sbjct: 21  DTWQAKKLFAPESNQAIQG----NEPAPYAIVIPPPNVTGKLHLGHAWDTTLQDMIIRQK 76

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G +V            ++   ++   + +Q L                         
Sbjct: 77  KMQGMDVL-------WLPGMDHAGIATQAKVEQRL------------------------- 104

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   EK++  V D+        I+     + +  D          G    + 
Sbjct: 105 RAEGVSRYDLGREKFVEQVWDWK-NEYAATIKQQWGKMGLSLDFDRERFTLDEGLNKAVN 163

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +  +L  +G +Y G          +    D +  +      G         +DG+ T+ 
Sbjct: 164 KVFIDLYNKGLIYRGEYIINWDPQARTALSDIE--VIYQDDEGAFYHVKYPFTDGT-TFD 220

Query: 335 AAD 337
             D
Sbjct: 221 GQD 223



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 329 GSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           G       D A  Y       G+D +I+         V R+       + ++   NVL+ 
Sbjct: 475 GWPENTTGDFAKYYPTNTLVTGYD-IIFFW-------VARMMFQGKEFTGQRPFKNVLIH 526

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            L+   RDG   KMSK  G+ +    V+++ G+D++R+ +       + + F + K+
Sbjct: 527 GLI---RDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKM 580


>gi|118594120|ref|ZP_01551467.1| valyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118439898|gb|EAV46525.1| valyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 934

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 65/239 (27%), Gaps = 33/239 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G         K    +I     N TG +H+GH     + D L       G
Sbjct: 16  NKWYEFWESKGYYQIGQDDTKLENFSILLPPPNVTGQLHMGHGFNQTLMDMLTRYHRMKG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                         L+   +D        V  + + +E   ++ 
Sbjct: 76  DNT---------------------------LWQPGTDHAGIATQIVVERQLDQEGISRHD 108

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E+ W    K++S  A+ K +R     L    D          G    + ++  
Sbjct: 109 LGREKFIEKVWE--WKNFSGGAITKQMR----RLGTSPDWGRERFTMDEGLSKSVTEVFV 162

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            L R G +Y G        T Q    D + +          ++ PL  S  S T     
Sbjct: 163 KLYRDGLIYRGKRLVNWDVTLQTAVSDLEVVQEDGNGFLWHINYPLTDSKTSLTIATTR 221


>gi|85858024|ref|YP_460226.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|123515751|sp|Q2LQK5|SYL_SYNAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85721115|gb|ABC76058.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 862

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 7   PQEIEEKWQRYWEEKNTFKVTEDPSKKKYYLLEMFPYPSGKIHIGHVRNYTIGDVVARYK 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMEGYNV 73


>gi|320353933|ref|YP_004195272.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122435|gb|ADW17981.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 823

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           IN       + +              +      K  +  +   P+G +H+GH R   +GD
Sbjct: 3   INDKYDFKAIEQRWQQRWEQETTNKVSHQPGRPKYYVLEMFPYPSGRIHMGHVRNYSIGD 62

Query: 149 TLASLMAFSGYEV 161
            +A      G+ V
Sbjct: 63  VIARYKRMQGFNV 75


>gi|294083997|ref|YP_003550754.1| Valyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663569|gb|ADE38670.1| Valyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 892

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +    +      +  +     T   I     N TG +H+GH     + D L   
Sbjct: 11  NPQAIEERWYDMWDQSNHFACDPSSSSTPYTIMMPPPNVTGSLHMGHALTFTLQDLLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G +   +   + AG     +                               V ++L
Sbjct: 71  HRMIGRDTLWQPGTDHAGIATQMV-------------------------------VERKL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +  +   +   + ++  V ++  ++   +I++ LK L    D          G    +
Sbjct: 100 AAENVNR-RDLGRDAFIEKVWEWKAESG-GMIQNQLKRLGASPDWSRERFTMDDGLSEAV 157

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                +L R G +Y                 D +
Sbjct: 158 IKTFVSLHRDGLIYRDKRLVNWDPKLMTAISDLE 191


>gi|284998014|ref|YP_003419781.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445909|gb|ADB87411.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 944

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|316935895|ref|YP_004110877.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315603609|gb|ADU46144.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 1059

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 24/179 (13%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-LLFRSTMVGDDVDRPLLKSDGSYT 332
            +I++    + ++ EG          ++   +R      +   + D        S  ++ 
Sbjct: 598 DEIVNQRIAEAFMQEGADAWYAEGAAERFLGERAAEGWQKVDDILD----VWFDSGSTHA 653

Query: 333 YFAAD------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVL 384
           +   D      LA  + K + G D ++Y+ GSD   G+      +  +   + +A  +V+
Sbjct: 654 FVLEDAQNFPGLAGIRRKVDGGADTVMYLEGSDQHRGWFHSS--LLESCGTRGRAPYDVV 711

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLD 436
           L     L   G   KMSK  G+      V+   G+D +R       +    R   E+L 
Sbjct: 712 LTHGFTLDEQGR--KMSKSLGNTTDPAKVIASSGADILRLWVCATDYADDQRIGPEILK 768


>gi|256848164|ref|ZP_05553608.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715224|gb|EEU30201.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 469

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 42/350 (12%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                  VN+          +H+G+ R A+  DT+   + F GY V    Y+++     +
Sbjct: 16  HPVHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFIGYHV---NYVSNFTDVDD 72

Query: 176 TLALSVFWRYQQALYNNDSDLPE--GYYPGVYLKH---VGKELADKYSSELLNFPEEKWL 230
            +         +A    +  +PE    Y   +L+    V  E A  +     N PE    
Sbjct: 73  KMI--------KAAREQEITVPELADKYIRAFLEDTTAVNIEPATMHPRATDNIPE---- 120

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                  ++ + ++I+    A  +  D++     F           ID+L          
Sbjct: 121 ------IIKFIQRLIQRGY-AYAVDGDVYYRARKFKHYG-QLSGQSIDDLEVG-----AS 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +  +K D     L   +       D P       +      +       +   D
Sbjct: 168 EHVSADEVNKKADPMDFALWKAAKPGEISWDSPWGAGRPGWH-----IECSVMSTKYLAD 222

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I +            E  +A + +    +          +       KMSK   +F+T
Sbjct: 223 T-IDIHAGGQDLEFPHHENEIAQSEAATGKKFVNYWMHNGFVTIGKDNEKMSKSLHNFVT 281

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           +  ++  V    +RF M   +    + +    + +   +N + ++Q A+ 
Sbjct: 282 VHDIIKHVDPQVLRFFMATTQYRRPIQYSEDNLVDA--QNNLAHIQTAFN 329


>gi|238760359|ref|ZP_04621500.1| Valyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701419|gb|EEP93995.1| Valyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 965

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPKEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|229579332|ref|YP_002837730.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238619982|ref|YP_002914808.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|228010046|gb|ACP45808.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238381052|gb|ACR42140.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 944

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 485

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 98/343 (28%), Gaps = 95/343 (27%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AVV D L                                          D + 
Sbjct: 36  HIGHARAAVVFDVLVRYFR-------------------------------------DQNF 58

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              +        V  ++  + + E L   E            Q  +    +D++ L +Q 
Sbjct: 59  AVHFVRN--FTDVDDKIIKRAAEEHLEADEVA----------QKYIAAYYEDMERLGVQP 106

Query: 257 DIFISEDDFHRGDPSPIRDII---DNLARQGYVYEGILPPPKSK-----------TTQKC 302
                  +F       I+D+I   +NL  +G+ Y         +             +  
Sbjct: 107 ------ANFEPKATEHIQDMIGLAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRELD 160

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGF 349
            M     +       D +D  L K              +G   +     A  +       
Sbjct: 161 TMRAGARIAPGEEKEDPLDFALWKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGLPL 220

Query: 350 DNMIYVMGSDHSGYVKRLE----AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           D    + G          E       AA  ++ A+  V    +          KMSK  G
Sbjct: 221 D----IHGGGQDLAFPHHENERAQSLAASGKELARFWVHNGFVQVEAE-----KMSKSLG 271

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +FIT+R ++     + +R+ ++ +     LDF++  + E  K 
Sbjct: 272 NFITIRDILSYYLPEVLRYFLVTKHYRSPLDFNWEVMDEAEKG 314


>gi|218514117|ref|ZP_03510957.1| leucyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 318

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNADPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|207723591|ref|YP_002253990.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206588793|emb|CAQ35756.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 959

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 78/239 (32%), Gaps = 27/239 (11%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDV 320
            H   P  +  +   + + G      L P +    +    + + D   + F S      V
Sbjct: 506 LHPRTPELLEQVAQRIEKSGVEAWQTLDPRELLGDEADMYEKNRDTLDVWFDSGTTHWHV 565

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
            R      GS+     D A  +    R  D  +Y+ GSD   G+       A+ +  K  
Sbjct: 566 IR------GSHAADLYD-ASAELADGRLAD--LYLEGSDQHRGWFHSSLLTASMLYGKPP 616

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L         DG   KMSK  G+ I  + +  ++G++ +R  +     S  L    
Sbjct: 617 YKGLLTHGF---TVDGEGRKMSKSIGNTIAPQEIAGKMGAEIIRLWVAATDYSGELAISD 673

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +K   +         +Y R R+  R       D D          Q  E D   + L
Sbjct: 674 EILKRVVE---------SYRRIRNTLRFLLANLTDYDHAKHALPA-EQWLEIDRYAVAL 722


>gi|254429356|ref|ZP_05043063.1| valyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195525|gb|EDX90484.1| valyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 928

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +     G+G    I     N TG +H+GH     + DTL    
Sbjct: 7   PDRIEQSWYEHWEKAGHF--KPSGQGDSFCIMIPPPNVTGSLHMGHAFQDTIMDTLVRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                    E    G           
Sbjct: 65  RMQGRNTLWQVGTDHAGIATQMVV-------------------ERKLAGE---------- 95

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
               +       EK+L  V ++  ++   I R  L+ +    D          G  + +R
Sbjct: 96  ---GTNRHELGREKFLDKVWEWKGESGGTITRQ-LRRMGASVDWTRERFTMDDGLSNAVR 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L ++G +Y G               D +
Sbjct: 152 EVFVRLHKEGLIYRGKRLVNWDPALHTAISDLE 184


>gi|28377485|ref|NP_784377.1| glutamyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254555715|ref|YP_003062132.1| glutamyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300769736|ref|ZP_07079618.1| glutamate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308179696|ref|YP_003923824.1| glutamyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258342|sp|Q88YY0|SYE_LACPL RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|28270317|emb|CAD63218.1| glutamate--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044642|gb|ACT61435.1| glutamyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300492644|gb|EFK27830.1| glutamate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045187|gb|ADN97730.1| glutamyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 496

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 105/310 (33%), Gaps = 39/310 (12%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAG 171
              +K+ + + + +PTG +H+G+ R A+     A       ++     ++ R    +   
Sbjct: 1   MAKSKIRVRY-APSPTGHLHIGNARTALFNYLFARHNKGKFILRIEDTDLKR-NVKDGEK 58

Query: 172 AQINTLA-LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           +Q++ L  L + W         D    +G   G Y +   K + D    +L++       
Sbjct: 59  SQMDNLTWLGIDW---------DEGPDKGGDFGPYRQSERKSIYDPLIQQLIDEG----- 104

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
              + Y  +  +   R+  +    +   ++ E  F        +  I      G      
Sbjct: 105 KAYESYMTEDELSAQRE-AQKARKEMPHYVYE--FAGMTEDEKQAKIAAAKAAGIQPVIR 161

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGF 349
              P++ T    DM + ++ F S  VG D    + K DG  TY FA  +     +    F
Sbjct: 162 FHVPENTTYAWDDMVKGKVSFESKTVGGDF--VIKKRDGMPTYNFAVVVDDHMMEISHVF 219

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                  G DH     +   +  A   +  +   +   +          K+SKR    + 
Sbjct: 220 R------GDDHVANTPKQLMIYEAFGWQPPKFGHMSLIINTE----TGKKLSKRDETVLQ 269

Query: 410 LRHVVDEVGS 419
                 E+G 
Sbjct: 270 FIEQYRELGY 279


>gi|83746251|ref|ZP_00943304.1| Isoleucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207742565|ref|YP_002258957.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|83727001|gb|EAP74126.1| Isoleucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206593958|emb|CAQ60885.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
          Length = 959

 Score = 43.4 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 78/239 (32%), Gaps = 27/239 (11%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDV 320
            H   P  +  +   + + G      L P +    +    + + D   + F S      V
Sbjct: 506 LHPRTPELLEQVAQRIEKSGVEAWQTLDPRELLGDEADMYEKNRDTLDVWFDSGTTHWHV 565

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
            R      GS+     D A  +    R  D  +Y+ GSD   G+       A+ +  K  
Sbjct: 566 IR------GSHAADLYD-ASAELADGRLAD--LYLEGSDQHRGWFHSSLLTASMLYGKPP 616

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L         DG   KMSK  G+ I  + +  ++G++ +R  +     S  L    
Sbjct: 617 YKGLLTHGF---TVDGEGRKMSKSIGNTIAPQEIAGKMGAEIIRLWVAATDYSGELAISD 673

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +K   +         +Y R R+  R       D D          Q  E D   + L
Sbjct: 674 EILKRVVE---------SYRRIRNTLRFLLANLTDYDHAKHALPA-EQWLEIDRYAVAL 722


>gi|322805422|emb|CBZ02986.1| glutamyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 485

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +YS +L+   E             
Sbjct: 59  IYNTLKITGLSHDEGP-DIGGPVGPYVQSERRNIYIEYSEKLIEKGEA------------ 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ L  L    +       + +      ++ ID    +G  Y      P + +T
Sbjct: 106 YYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIDKKIAEGVPYVIRQKNPTTGST 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 166 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 218 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 266


>gi|296109085|ref|YP_003616034.1| lysyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433899|gb|ADG13070.1| lysyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 521

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 115/330 (34%), Gaps = 45/330 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+ R  +  D +       G E    + I D    +  L   +   ++Q +  
Sbjct: 23  PSGHIHIGNARETLTADAIYKAYLKRGGEGELIF-IADTFDPLRKLYPFLPKEFEQYIGM 81

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             S++P             +     Y+   LN   E    +  +  V    +  +  L  
Sbjct: 82  PLSEIP-----------CPEGCCQSYADHFLNPYIESLEDLGIEIKVYKADECYKKGLYD 130

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGIL--PPPKSKTTQKCDMDR 306
             I   +   E          IR+I++   +    G  +   +     KS  T+  + D 
Sbjct: 131 EKIDMALKNRE---------KIREILNKFRKDPLPGDWFPIFMLCENCKSLKTKVLNYDG 181

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-----GSDHS 361
           +++ +     G + +    K            A    + +      I+ +     G DH+
Sbjct: 182 EKVKYVCEKCGYEGEAKPYKGR----------AKLPWRVDWPARWSIFKVTLEPMGKDHA 231

Query: 362 ---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
              G     + +A  V   +  + V+  E ++L      + MS   G    ++       
Sbjct: 232 AAGGSYDTGKLIAKEVFNYEPPMKVV-YEWIQLKIGDKAVPMSSSKGVVFAVKDWTHIAH 290

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            + +RF++L  K S+ +DFD  K+ +  +E
Sbjct: 291 PEILRFLILRSKPSKHIDFDLKKIPDLVEE 320


>gi|254785207|ref|YP_003072635.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511519|sp|C5BQX2|SYI_TERTT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|237684439|gb|ACR11703.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 934

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 26/203 (12%)

Query: 228 KWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P   +  +++M++      I R     + I   +     D H   P+ +  +   + 
Sbjct: 441 EWIPDWGEARMRSMLEASPDWCISRQRTWGVPIALFVHKETQDLHPDTPALVEKVAALIE 500

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
             G      L P +         +      + T   D     +    G   Y        
Sbjct: 501 TDGMDAWFNLNPEEILG------EDAANYSKVTDTLD-----VWFDSGVTHYSV-----I 544

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           + + E  +   +Y+ GSD   G+ +     A A++       VL         D    KM
Sbjct: 545 QQREELQYPADLYLEGSDQHRGWFQSSLKTAIAINGTAPYKQVLTHGF---TVDANGKKM 601

Query: 401 SKRAGDFITLRHVVDEVGSDSVR 423
           SK  G+ ++ + V++E+G+D +R
Sbjct: 602 SKSIGNTVSPQKVMNELGADVLR 624


>gi|167569077|ref|ZP_02361951.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 945

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 96/306 (31%), Gaps = 35/306 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRIERAGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +        +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGCAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+         +  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPA-SEWLEIDRYAVAFAAQLQ--TELL 720

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA- 567
            +     E + +   L    S    G +    ++       A+N      +  L H    
Sbjct: 721 AH-YEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASN-ARRSAQTALYHVTQG 778

Query: 568 --SIIN 571
              ++ 
Sbjct: 779 LLRVLA 784


>gi|297618741|ref|YP_003706846.1| lysyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297377718|gb|ADI35873.1| lysyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 540

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 120/360 (33%), Gaps = 60/360 (16%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           +     +  +  +     G +  +      P+G +HVG+ R  +  D +   +  +G + 
Sbjct: 1   MYWADATAEKIIKKRDRDGIEEYVVSSGITPSGHIHVGNARETLTADGIHQGLKKAGKKS 60

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
              +  +D             +   + LY         +    Y K++G  L++    E 
Sbjct: 61  KLIFVADD-------------YDPLRKLYP--------FLTEEYTKYIGMPLSEIPCPEG 99

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-SPIRDIIDNL 280
                        +   +  +    + LK L I+   + + + +  G     I   +DN 
Sbjct: 100 -----------CCNSYAEHFLNPYLNSLKDLGIEITTYRASECYKAGMYNDAIIKALDNR 148

Query: 281 ARQGYVYEGILPPPKSK--TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD- 337
            +   + +G    P +          ++   +  + ++G + +      D + TY  +D 
Sbjct: 149 LKIKEILDGFRKEPLADDWYPLNVVCEKCGKMINTKILGYNSE------DKTITYVCSDC 202

Query: 338 -----------LAYFKCKYERGFDNMIYVM-----GSDH--SGYVKRLEAVAAAVSEKKA 379
                      +     + +      I+ +     G DH  SG         + +     
Sbjct: 203 GFENNVQPFNGIGKLPWRVDWPARWQIFGVTAEPMGKDHGASGGSYDTGVKISRMVYGYV 262

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
               ++ E ++L      + MS  AG    ++   +    + +RF+++  K S+ +DFD 
Sbjct: 263 PPEKMIYEWIQLKVGDKAVPMSSSAGVVFAVKDWNEICHPEILRFLLVRSKPSKHIDFDL 322


>gi|153827689|ref|ZP_01980356.1| valyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149737837|gb|EDM52742.1| valyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 387

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|148559808|ref|YP_001259066.1| glutamyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161619099|ref|YP_001592986.1| glutamyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843412|ref|YP_001627816.1| glutamyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225627615|ref|ZP_03785652.1| glutamyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701888|ref|ZP_05163716.1| glutamyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704434|ref|ZP_05166262.1| glutamyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254706670|ref|ZP_05168498.1| glutamyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710222|ref|ZP_05172033.1| glutamyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031716|ref|ZP_05445330.1| glutamyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256061229|ref|ZP_05451380.1| glutamyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256159874|ref|ZP_05457603.1| glutamyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255116|ref|ZP_05460652.1| glutamyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256369572|ref|YP_003107082.1| glutamyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168849|ref|ZP_05755660.1| glutamyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566319|ref|ZP_05836789.1| glutamyl-tRNA synthetase 2 [Brucella suis bv. 4 str. 40]
 gi|261222314|ref|ZP_05936595.1| glutamyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314130|ref|ZP_05953327.1| glutamyl-tRNA synthetase 2 [Brucella pinnipedialis M163/99/10]
 gi|261317781|ref|ZP_05956978.1| glutamyl-tRNA synthetase 2 [Brucella pinnipedialis B2/94]
 gi|261325237|ref|ZP_05964434.1| glutamyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261752452|ref|ZP_05996161.1| glutamyl-tRNA synthetase 2 [Brucella suis bv. 5 str. 513]
 gi|261755112|ref|ZP_05998821.1| glutamyl-tRNA synthetase 2 [Brucella suis bv. 3 str. 686]
 gi|261758337|ref|ZP_06002046.1| glutamyl-tRNA synthetase 2 [Brucella sp. F5/99]
 gi|265988812|ref|ZP_06101369.1| glutamyl-tRNA synthetase 2 [Brucella pinnipedialis M292/94/1]
 gi|265998277|ref|ZP_06110834.1| glutamyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852487|ref|ZP_06793160.1| glutamyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|229470590|sp|A5VQR9|SYE2_BRUO2 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|229470591|sp|B0CGU5|SYE2_BRUSI RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|238687215|sp|A9M5G0|SYE2_BRUC2 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|148371065|gb|ABQ61044.1| glutamyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161335910|gb|ABX62215.1| glutamyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163674135|gb|ABY38246.1| glutamyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225617620|gb|EEH14665.1| glutamyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|255999734|gb|ACU48133.1| glutamyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260155837|gb|EEW90917.1| glutamyl-tRNA synthetase 2 [Brucella suis bv. 4 str. 40]
 gi|260920898|gb|EEX87551.1| glutamyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261297004|gb|EEY00501.1| glutamyl-tRNA synthetase 2 [Brucella pinnipedialis B2/94]
 gi|261301217|gb|EEY04714.1| glutamyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261303156|gb|EEY06653.1| glutamyl-tRNA synthetase 2 [Brucella pinnipedialis M163/99/10]
 gi|261738321|gb|EEY26317.1| glutamyl-tRNA synthetase 2 [Brucella sp. F5/99]
 gi|261742205|gb|EEY30131.1| glutamyl-tRNA synthetase 2 [Brucella suis bv. 5 str. 513]
 gi|261744865|gb|EEY32791.1| glutamyl-tRNA synthetase 2 [Brucella suis bv. 3 str. 686]
 gi|262552745|gb|EEZ08735.1| glutamyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264661009|gb|EEZ31270.1| glutamyl-tRNA synthetase 2 [Brucella pinnipedialis M292/94/1]
 gi|294821076|gb|EFG38075.1| glutamyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 473

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|34536678|dbj|BAC87668.1| unnamed protein product [Mus musculus]
          Length = 1059

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 56/214 (26%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++ +  +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G    R  +I            +V                           V K
Sbjct: 168 RWHRMRG---DRVLWI-PGSDHAGIATQAV---------------------------VEK 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +     I + L AL    D          G  +
Sbjct: 197 QLWKEQRVRRHELSREDFLRAVWQWKHEKG-GEIYEQLCALGASLDWDRECFTMDAGSSA 255

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 256 AVTEAFVRLYNSGLLYRNRQLVNWSCTLRSAISD 289


>gi|124810112|ref|XP_001348763.1| valine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497663|gb|AAN37202.1| valine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1090

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 54/194 (27%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+  +         +           K  I     N TG +H+GH     + D+L     
Sbjct: 56  SFWEENDYFKPKKELIEENKNNEHIKKFVIILPPPNVTGTLHIGHTLTVAIQDSLVRYKR 115

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
              Y        + AG       ++     ++ LY  ++ + + Y    ++K +  E  D
Sbjct: 116 MKNYLTLYIPGTDHAG-------IATQTVVEKMLYKKENKIRQDYGREEFVKKI-YEWKD 167

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            +                           I + +K +    D        +    + +++
Sbjct: 168 LHG------------------------NKINNQMKRIGASVDWSREYFTMNENLSNAVKE 203

Query: 276 IIDNLARQGYVYEG 289
                   G +Y  
Sbjct: 204 AFIKFYESGLIYRD 217


>gi|282851660|ref|ZP_06261025.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282557628|gb|EFB63225.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 933

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 106/321 (33%), Gaps = 58/321 (18%)

Query: 214 ADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
            DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD   
Sbjct: 421 VDKFRDQILAEIEKANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPI 479

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  +     ++G            + EG           + + D   + F S   
Sbjct: 480 VTPETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDS--- 536

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + + DG                  GF   +Y+ GSD   G+       + AV+
Sbjct: 537 GSSWAGVMKERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVT 579

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +
Sbjct: 580 GKAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDV 636

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +++ ++         +Y + R+  R       D D                  E
Sbjct: 637 AVSQDILRQSAE---------SYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYME 687

Query: 496 LQLIVHLAEYPRVIENATIAQ 516
           ++L        R+IE A  A 
Sbjct: 688 IKL-------NRLIEEAIEAY 701


>gi|123784130|sp|Q3U2A8|SYVM_MOUSE RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|74206841|dbj|BAE33234.1| unnamed protein product [Mus musculus]
          Length = 1060

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 56/214 (26%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++ +  +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G    R  +I            +V                           V K
Sbjct: 168 RWHRMRG---DRVLWI-PGSDHAGIATQAV---------------------------VEK 196

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +     I + L AL    D          G  +
Sbjct: 197 QLWKEQRVRRHELSREDFLRAVWQWKHEKG-GEIYEQLCALGASLDWDRECFTMDAGSSA 255

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 256 AVTEAFVRLYNSGLLYRNRQLVNWSCTLRSAISD 289


>gi|50511161|dbj|BAD32566.1| mKIAA1885 protein [Mus musculus]
          Length = 1086

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 56/214 (26%), Gaps = 32/214 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++ +  +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 131 YVEAAWYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 190

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G    R  +I            +V                           V K
Sbjct: 191 RWHRMRG---DRVLWI-PGSDHAGIATQAV---------------------------VEK 219

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E +L  V  +  +     I + L AL    D          G  +
Sbjct: 220 QLWKEQRVRRHELSREDFLRAVWQWKHEKG-GEIYEQLCALGASLDWDRECFTMDAGSSA 278

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + +    L   G +Y        S T +    D
Sbjct: 279 AVTEAFVRLYNSGLLYRNRQLVNWSCTLRSAISD 312


>gi|17230775|ref|NP_487323.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|48428560|sp|Q8YS09|SYL_ANASP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17132378|dbj|BAB74982.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 872

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 92  YLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P+ L +    + V  G++  +    K     +      P+G +H+GH R   + D +
Sbjct: 4   RYNPATLEEKWQKTWVELGLDKTQTQSNKPKFYALSMF-PYPSGSLHMGHVRNYTITDVI 62

Query: 151 ASLMAFSGYEV 161
           A L    GY V
Sbjct: 63  ARLKRMQGYRV 73


>gi|331090971|ref|ZP_08339813.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330405193|gb|EGG84729.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 485

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 109/300 (36%), Gaps = 50/300 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E  +         + +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEDGDFLLRI-----EDTDQERLVE------GAIDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G Y G Y++       L  KY+ +L+   +  +        
Sbjct: 58  IYRTLEKTGLIHDEGPDKDGGY-GPYVQSERNASGLYLKYAKQLVEQGD-AYYCFCDKER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++++   + +    + +     +             ++ ++    +G  Y   +  P   
Sbjct: 116 LESLKSTVAEGGTEIVVYDKHCLHLS----------KEEVEKNLAEGKPYVIRINMPTEG 165

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
           TT   D     +   +  +    D  L+KSDG  TY  A++       +     + +V+ 
Sbjct: 166 TTTFHDDIYGDITVPNAELD---DMILIKSDGFPTYNFANV------IDDHLQEITHVVR 216

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+++     +   +  A   +      + C L+    D    K+SKR G   +   ++++
Sbjct: 217 GNEYLSSAPKYNRLYEAFGWEVP--TYVHCPLIT---DESHKKLSKRCGHS-SYEDLLEQ 270


>gi|328955608|ref|YP_004372941.1| Isoleucyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455932|gb|AEB07126.1| Isoleucyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 934

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 38/233 (16%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     + A         V+    V    DG   KMSK  G+ I   
Sbjct: 571 LYLEGSDQHRGWFQSSLLTSVAAEGTAPFRGVVSQGFV---LDGQGRKMSKSLGNVIDPN 627

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR---QA 468
            + +E+G+D VR  +     S  +  D   +   S          AY R R+ FR     
Sbjct: 628 AICEEMGADIVRLWVASVDTSSDVACDRDILARTSD---------AYRRFRNTFRFLLSE 678

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY--LY 526
            +   D   D      +        +++ L+         +  A  + E  ++  Y  LY
Sbjct: 679 LEGQFDPKTDAVDVAQLLPLDRLMLAKMTLVQ------AEVTGAYASYEFNRV--YRTLY 730

Query: 527 D--LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           D  +  + + +    ++           R     R     +  ++++  L+++
Sbjct: 731 DFVVTELSNVYLDALKDRLYC------ERADAPAR----RSAQTVLSELLSML 773


>gi|313679650|ref|YP_004057389.1| glutamyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152365|gb|ADR36216.1| glutamyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 483

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 96/279 (34%), Gaps = 30/279 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG  HVG     +     A     +G +        D    +      +    + 
Sbjct: 6   IAPSPTGYPHVGTAYIGIFSYVWAR---KNGGKFIVRIEDTDQNRYVEGAEEGILRALKW 62

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              + D     G   G Y +    EL  +Y+ +LL+          + +     +  IR+
Sbjct: 63  LGLDYDEGPDVGGPNGPYRQSERLELYRRYAQQLLDEGL-----AYRAFETPEELAAIRE 117

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           +L+   + +         + G    I R+  +  A  G  +   L  P++  T   D+ R
Sbjct: 118 ELQRKGLGYG--------YDGRARKIPREEAEARATAGEPHVIRLKTPETGVTVVHDVLR 169

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             + F +  +    D  LLKSDG  TY    LA     +     ++I   G D       
Sbjct: 170 GNIEFDNREIP---DVVLLKSDGFPTYH---LAVVVDDHLMEVTDVIR--GEDWLVSTPI 221

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            + +  A    + +        + L R     K+SKR G
Sbjct: 222 QKLLYQAFGWDEPK-----WYHLPLLRAPGGAKLSKRTG 255


>gi|302390935|ref|YP_003826755.1| glutamyl-tRNA synthetase ;glutamate--tRNA(Gln) ligase
           [Acetohalobium arabaticum DSM 5501]
 gi|302203012|gb|ADL11690.1| glutamyl-tRNA synthetase ;glutamate--tRNA(Gln) ligase
           [Acetohalobium arabaticum DSM 5501]
          Length = 488

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 101/279 (36%), Gaps = 27/279 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A     +G  V R     D     +     +       
Sbjct: 9   APSPTGQIHIGNIRTALFTWLYAR--KHNGTTVLRIE-DTDQERSTSEFEEIILQETDWL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D  +  G   G Y +    ++ DKY   L+   +  +      Y     ++ +R++
Sbjct: 66  GLDWDEGVRAGGDYGPYRQSDRLDIYDKYIDRLIEEDKAYYC-----YCTDEELEQMREE 120

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            KA   +   +       R      R  ++   R+  V   +  P +       D+   +
Sbjct: 121 AKAKG-KPPKYNGRC---RNLSEEERKELEAEGREPAVRFKM--PTEEIKIVVNDLVHGE 174

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F S ++ D     ++KSDG  TY   + A     +     ++I   G DH     + +
Sbjct: 175 VEFSSEVLDDF---VIVKSDGLPTY---NFAVVIDDHLMEISHVIR--GEDHLSNTPKQQ 226

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+  +  +        + +       K+SKR+G+ 
Sbjct: 227 LIYDALDWEMPEFGH-----LPMILGEDKSKLSKRSGEA 260


>gi|294155496|ref|YP_003559880.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599965|gb|ADE19461.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 779

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + S + K           +         K  I  +   P+G +H+GH R   +GD +A  
Sbjct: 5   NNSKIEKYWQEYWDDTQYFEPKKDFSLPKKYILSMFPYPSGNVHMGHVRNYTIGDAIARF 64

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 65  YRRKGFNV 72


>gi|260906310|ref|ZP_05914632.1| valyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 881

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 58/195 (29%), Gaps = 43/195 (22%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D    KMSK  G+ +    ++ E     G D+VR+     K      +D  ++       
Sbjct: 596 DPDRKKMSKSKGNVVVPTDILAETKPGFGPDAVRYWAASAKLGSDTAYDVTQM------- 648

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                Q        +   +K              +     + D     L+  LA    V+
Sbjct: 649 -----QIGRRLAMKLLNASKFALAQGVHSGLVGQLGSVTHDLD---RALLKKLA---EVV 697

Query: 510 ENATIAQEPYKLAFYLYDL--ASVFHGHWSHGRENPRLR-----FVQANNRKLTMMRLQL 562
           + A+     Y    Y + L  A  F   W    +   L          ++ +L+      
Sbjct: 698 DAASTHMAAY---DYAHALRAAESF--FWEFTDDYVELVKDRSYGATGDDDQLSAH---- 748

Query: 563 VHAVASIINSGLNII 577
                  + + L+++
Sbjct: 749 -----VTLATALDVL 758


>gi|193083786|gb|ACF09469.1| methionyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-47-D6]
          Length = 551

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 54/189 (28%), Gaps = 52/189 (27%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            +K  I        G +H+GH     +  D     +   G E       +D G  I  L 
Sbjct: 2   NSKAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPI--LI 59

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S            +   PE Y                                     V
Sbjct: 60  QS----------EKEGKTPEEY-------------------------------------V 72

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q   K   +D +A NI+ D F         +   ++D+   L + G++YE  +      T
Sbjct: 73  QYWNKRDFEDFEAFNIKFDFFYKTSSSE--NRQFVQDVFKKLEQAGHIYENEIVQLYCNT 130

Query: 299 TQKCDMDRK 307
            +K   DR 
Sbjct: 131 DKKFLPDRY 139


>gi|209885248|ref|YP_002289105.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873444|gb|ACI93240.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 523

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 105/346 (30%), Gaps = 38/346 (10%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
             +      ++  I    A P G  H+GH   A+  D LA      G +V      ++ G
Sbjct: 1   MAKAESPARSRYYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGMDVFFLTGTDEHG 60

Query: 172 AQI-------NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
            ++             +  R      + D  L   +    +++       D         
Sbjct: 61  LKMIQTAQKEGMTPAELATRNAARFKDMDRRLNISFDR--FIRTSEVAHHDSTQEIWRRM 118

Query: 225 PEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDI---FISEDDFHRGDPSPI 273
                + +        V+D +  A  + +  D K           ++ E  +        
Sbjct: 119 AANGDIYLSSYAGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLS-AY 177

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-----MVGDDVDRPLLK-S 327
           +D +  L  Q   + G         +      +   + R+T      V DD +  +    
Sbjct: 178 QDKLLALYEQHPEFIGPDVRRNEVVSFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWV 237

Query: 328 DGSYTYFA----ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           D    Y       D A    KY    D  ++V+G D    + R  AV        A I V
Sbjct: 238 DALTNYITGINFPDEADANWKY-WPAD--VHVIGKD----IIRFHAVYWPAFLMSAGIAV 290

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                   +      KMSK  G+ +    + ++ G D +R+ +L  
Sbjct: 291 PKRVYAHGFLFNRGEKMSKSVGNVVDPFELANQYGVDQLRYFLLRE 336


>gi|125718928|ref|YP_001036061.1| glutamyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166226859|sp|A3CQQ6|SYE_STRSV RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|125498845|gb|ABN45511.1| Glutamyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 485

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 100/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++  KY +ELL+        +     V
Sbjct: 64  -----RWLGIDWDESPETHENYRQSERL-----DMYQKYVNELLDKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSK 297
                    + +    +   +I+E   + G     +   I      G +    L   ++ 
Sbjct: 108 TEEELAAERERQEAAGETPRYINE---YLGMSEEEKAAYIAEREAAGIIPTVRLAVNETG 164

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  D+ + ++ F    +G   D  + K DG  TY   + A     +     ++I   G
Sbjct: 165 VYKWTDIVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--G 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
            DH     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 218 DDHIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|297835664|ref|XP_002885714.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331554|gb|EFH61973.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1036

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 32/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SPS + K       +   +  +      +  I     N TG +H+GH     V DTL   
Sbjct: 78  SPSAVEKSWYEWWETSEFFKADATSSKPQFVIVLPPPNVTGALHIGHALTCAVQDTLIRW 137

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+        + AG     +                               V K L
Sbjct: 138 KRMSGFNALWVPGFDHAGIATQVV-------------------------------VEKHL 166

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           + +      +F  E++L  V  +  ++    I+  L+ +    D               +
Sbjct: 167 SRETGLTRHDFGREEFLNHVWQW-TESKSGTIKSQLRRMGSSLDWSRECFTMDEHRSKAV 225

Query: 274 RDIIDNLARQGYVYEGI 290
            +    L ++G +Y  +
Sbjct: 226 TEAFVRLHKEGLIYRDL 242


>gi|209965829|ref|YP_002298744.1| leucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|238064871|sp|B6IU54|SYL_RHOCS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209959295|gb|ACI99931.1| leucyl-tRNA synthetase LeuS [Rhodospirillum centenum SW]
          Length = 865

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   +G         K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 11  AKWQAAWADAGSFAVTADPAKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARFKRAKG 69

Query: 159 YEV 161
           + V
Sbjct: 70  FNV 72


>gi|187778238|ref|ZP_02994711.1| hypothetical protein CLOSPO_01830 [Clostridium sporogenes ATCC
           15579]
 gi|187775166|gb|EDU38968.1| hypothetical protein CLOSPO_01830 [Clostridium sporogenes ATCC
           15579]
          Length = 488

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 13  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +Y+ +L+   E             
Sbjct: 62  IYNTLEITGLSHDEGP-DIGGPVGPYVQSERRNIYIEYAEKLIEKGEA------------ 108

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 +D L  L    +       + +      ++ ID    +G  Y      P + +T
Sbjct: 109 YYCFCSKDRLDMLRANSEALKRPFRYDKHCIDLSKEEIDKKIAEGIPYVIRQKNPTTGST 168

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 169 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 220

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 221 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 269


>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6831682|sp|O58370|SYC_PYRHO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 476

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 114/383 (29%), Gaps = 98/383 (25%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D   +I         R  +    + + L
Sbjct: 38  HLGHARTYIAFDVIRRYLEHKGYSVLMVMNFTDIDDKI--------IRRAKETGEDPAKL 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E                                           +K+  +D+KAL ++ 
Sbjct: 90  AE-----------------------------------------KFIKVFLEDMKALKVKP 108

Query: 257 DIFISEDDFHRGDPSPIRDII---DNLARQGYVYEG----------ILPPPKSKTTQKCD 303
                  D +      I DII   + L  +GY YEG               K    +  +
Sbjct: 109 ------ADIYPRVTEHIEDIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEE 162

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGFD 350
           + +   +       +  D  L K              +G   +               FD
Sbjct: 163 LRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFD 222

Query: 351 NMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             I+  G+D     H   + + EA           ++  L     + +     KMSK  G
Sbjct: 223 --IHGGGNDLIFPHHENEIAQSEAC-----FGHEWVHYWLHTGFVMVKG---EKMSKSLG 272

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           +F+T+R ++     + +RF +L +     LD+    +  Q  +N +  +       R   
Sbjct: 273 NFVTVRELLQRYSPEVIRFFVLQKHYRSPLDYSEEGL--QHAKNNLERLYNTLENIRIAM 330

Query: 466 RQAKDIFPDLDFDLFPRNVIPQE 488
             A+  +   + D    N I + 
Sbjct: 331 ENAELAYTWDENDFKAYNSIKEA 353


>gi|319779679|ref|YP_004130592.1| Valyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109703|gb|ADU92449.1| Valyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 957

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 53/204 (25%), Gaps = 37/204 (18%)

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
             +G     +    G    I+F   N TG +H+GH     + D L      +G +     
Sbjct: 34  FEAGQYVQTDSKFSGEPFAIQFPPPNVTGFLHMGHAFNQTIMDGLVRYYRMNGSDTVYIP 93

Query: 166 YINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
             + AG   QI                                  V +   D       +
Sbjct: 94  GSDHAGIATQI----------------------------------VVERQLDAEGVSRHD 119

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
              EK+L  V D+   +    I   ++ L    D               + +    L  Q
Sbjct: 120 LGREKFLERVWDWKNISG-GTIHKQIRKLGSSADWSREYFTMDDQMSKGVIETFVRLYEQ 178

Query: 284 GYVYEGILPPPKSKTTQKCDMDRK 307
           G +Y G               D +
Sbjct: 179 GLIYRGKRLVNWDPVLGTAISDLE 202


>gi|302534400|ref|ZP_07286742.1| valyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443295|gb|EFL15111.1| valyl-tRNA synthetase [Streptomyces sp. C]
          Length = 873

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 85/294 (28%), Gaps = 57/294 (19%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           V  G      S      D D     F S +           S   +     DLA F    
Sbjct: 433 VCVGPDEEAPSGGGWTQDTDVLDTWFSSGL--------WPFSTLGWPEKTPDLAKF---- 480

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              +   + V G D   +      +   +     ++      L  L RD    KMSK  G
Sbjct: 481 ---YSTDVLVTGHD-IIFFWVARMMMFGLYAMDGEVPFKTIALTGLVRDERGKKMSKSFG 536

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKN---SELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
           + +     +D+ GSD+VRF +    N      +  D+ +   +              +  
Sbjct: 537 NVVDPLDWMDKYGSDAVRFTLAKGANPGTDVPIGEDWVQASSKF-----------ANKIW 585

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPY 519
           +  R A      ++ +L P   +     +          L+   + +          +  
Sbjct: 586 NATRFALMNGATIEGELPPAEQLSATDRW---------ILSRLNKTVAQVDGYYEDFQFS 636

Query: 520 KLAFYLY------------DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           KL+  LY            +L+      ++ G +      V      + + RL 
Sbjct: 637 KLSEALYHFAWDEVFDWYVELSKT--TFFAGGEQAKVSSRVLGEVIDVML-RLL 687



 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 75/285 (26%), Gaps = 51/285 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 20  APAEVEGKLYERWVERGYFTADAASEKPAYTIVIPPPNVTGSLHLGHAFQHTLMDALTRR 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E             ++   ++   + +Q L                        
Sbjct: 80  KRMQGFESL-------WLPGMDHAGIATQNKVEQQL------------------------ 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   E+++  V  +  +   KI+   ++ L    D          G    +
Sbjct: 109 -AEEGKSRHDLGREEFVERVWQWKEEYGGKILGQ-MRRLGDGVDWSRERFTMDEGLSKAV 166

Query: 274 RDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           + I   L     +Y              + +  + +         S   G+  D  ++ +
Sbjct: 167 QTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQEDAGELVSIRYGEGEDSLVVAT 226

Query: 328 DGSYTYFA-ADLAYFKCKYERGF-----------DNMIYVMGSDH 360
             + T      +A                     D  I V+   H
Sbjct: 227 TRAETMLGDTAIAVHPDDERYKHLVGRLVKLPLTDRSIPVVADAH 271


>gi|300727136|ref|ZP_07060555.1| isoleucine--tRNA ligase [Prevotella bryantii B14]
 gi|299775680|gb|EFI72271.1| isoleucine--tRNA ligase [Prevotella bryantii B14]
          Length = 1222

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 91/238 (38%), Gaps = 46/238 (19%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDN----LARQGYVYE 288
           DYS +   KI   DL    I   I + E+    +R +   I    D+     A+Q Y +E
Sbjct: 638 DYSQENYDKI---DLHRPYIDRIILVDEEGKPMYR-ESDLIDVWFDSGSMPYAQQHYPFE 693

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G +       T K + + ++ L  ST  G  V            Y+ AD           
Sbjct: 694 GAMNAEALAATGKSEAEYREELVHSTYTGIPVP---------PAYYPAD----------- 733

Query: 349 FDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               I   G D   G+   L A++  V ++ A  NV+   LV    D    KMSK  G+ 
Sbjct: 734 ---FINE-GVDQTRGWFFTLHAISTMVFDQVAFKNVISSGLV---LDAKGNKMSKHVGNV 786

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
                ++D+ G+D VRF ML      + L FD   V E  ++          F+  YA
Sbjct: 787 TNPFEMIDKYGADPVRFYMLTNSEPWDNLKFDPNGVDETRRKFFGTLYNTYSFFALYA 844


>gi|294783391|ref|ZP_06748715.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294480269|gb|EFG28046.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 859

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQEKWAKDNIFKTENEVAGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|238853976|ref|ZP_04644333.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833421|gb|EEQ25701.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 933

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 106/321 (33%), Gaps = 58/321 (18%)

Query: 214 ADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
            DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD   
Sbjct: 421 VDKFRDQILAEIEKANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPI 479

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  +     ++G            + EG           + + D   + F S   
Sbjct: 480 VTPETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDS--- 536

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + + DG                  GF   +Y+ GSD   G+       + AV+
Sbjct: 537 GSSWAGVMKERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVT 579

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +
Sbjct: 580 GKAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDV 636

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +++ ++         +Y + R+  R       D D                  E
Sbjct: 637 VVSQDILRQSAE---------SYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYME 687

Query: 496 LQLIVHLAEYPRVIENATIAQ 516
           ++L        R+IE A  A 
Sbjct: 688 IKL-------NRLIEEAIEAY 701


>gi|237739547|ref|ZP_04570028.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423155|gb|EEO38202.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 859

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQEKWAKDNIFKTENEVAGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|229527561|ref|ZP_04416953.1| valyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229335193|gb|EEO00678.1| valyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327484991|gb|AEA79398.1| Valyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 953

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|254486745|ref|ZP_05099950.1| glutamyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043614|gb|EEB84252.1| glutamyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 441

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 94/304 (30%), Gaps = 65/304 (21%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINT 176
           + I   + +PTG +HVG+ R A++   +A       ++     +  R             
Sbjct: 1   MTITRFAPSPTGYIHVGNLRTALMNYLIARKNGGTFILRIDDTDPIRS------------ 48

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
                   Y + L  + + L   +           E  DKY +      E        + 
Sbjct: 49  -----KEEYVEGLKEDLTWLGLKW----DRVERQSERLDKYRAAADKLREMGRFYEAWET 99

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             +        DLK           +   + G P        NL          L   + 
Sbjct: 100 PTEL-------DLKR----------KKQLNMGKPPVYDRAALNLTEAEKT---KLREERG 139

Query: 297 KTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
               +  +D++++ ++  ++GD         D  L+++DG   Y    LA      E G 
Sbjct: 140 PGVWRFKLDQERIEWKDGILGDISIDAASVSDPVLIRADGQILYT---LASVVDDTEMGV 196

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            N+  V GSDH         +  A+     +          L        +SKR G  + 
Sbjct: 197 TNV--VRGSDHVTNTATQIQIMKALGGTVPEFAHH-----SLLTGPQGEALSKRLG-VLA 248

Query: 410 LRHV 413
           LR +
Sbjct: 249 LRDL 252


>gi|218438831|ref|YP_002377160.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226695251|sp|B7KCI7|SYL_CYAP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218171559|gb|ACK70292.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 854

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   + V  G++       K     +      P+G +H+GH R  V+ D +A L    G+
Sbjct: 13  KWQQTWVEMGLDQTPEDNTKPKYYALSMF-PYPSGNLHMGHVRNYVITDVIARLKRMQGH 71

Query: 160 EV 161
            V
Sbjct: 72  RV 73


>gi|254291421|ref|ZP_04962213.1| valyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422611|gb|EDN14566.1| valyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 953

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|33303701|gb|AAP22258.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 397

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 81/292 (27%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++  ++    EE  L +     V  ++  I++  + ++I +D FI            + 
Sbjct: 20  DEHGQKIQKKAEE--LNVTPQAYVDNIVAGIKELWEKMDISYDDFI--RTTEDRHKDVVE 75

Query: 275 DIIDNLARQGYVY----------------------EGILPPPKSKTTQKCDMDRKQLLFR 312
            I   L  QG +Y                      + I+   K    +  D      L R
Sbjct: 76  KIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDRGHDVELVR 135

Query: 313 STMV----GDDVDRPLLKSDGSYTYF-----------------AADLAYFKCKYERG--- 348
                   G  VDR L   + +  +                    DLA  +  ++ G   
Sbjct: 136 EESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRV 195

Query: 349 ---FDNMIYVM-------------GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                ++IYV              G+++   Y K   A    V ++  + + +   ++ +
Sbjct: 196 PGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILM 255

Query: 392 YRD--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             D                  KMSK  G+ +    ++D  G D++R+ +L  
Sbjct: 256 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLRE 307


>gi|320539292|ref|ZP_08038962.1| valyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030684|gb|EFW12693.1| valyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 963

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 57/196 (29%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + + L         +  N         I     N TG +H+GH     + DTL   
Sbjct: 13  DPKEIEQKLYDHWEHQGYFKPNGDTSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLIRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 73  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  + ++  +  +   +   I R  ++ L    D          G  + +
Sbjct: 102 AAEEGKTRHDYGRDAFIDKIWQWKAGSGGTITRQ-MRRLGNSVDWERERFTMDDGLSNAV 160

Query: 274 RDIIDNLARQGYVYEG 289
           R++   L ++  +Y G
Sbjct: 161 REVFVRLYQEDLIYRG 176


>gi|304393180|ref|ZP_07375108.1| isoleucine--tRNA ligase [Ahrensia sp. R2A130]
 gi|303294187|gb|EFL88559.1| isoleucine--tRNA ligase [Ahrensia sp. R2A130]
          Length = 1002

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 63/198 (31%), Gaps = 17/198 (8%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT-GPMHVGHCRCAVVGDTLASL 153
           P    + +      G+        KG    +         G +H+GH    ++ D +   
Sbjct: 25  PKAEPEHVKRWQEDGLYKQLREDSKGRPKYVLHDGPPYANGNLHIGHALNKILKDIITRS 84

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+     Y+         +   +  +Y+    N D D+P   +          + 
Sbjct: 85  FQMRGYDS---NYVPGWDCHGLPIEWKIEEQYRANNRNKD-DVPINEFR---------QQ 131

Query: 214 ADKYSSELLNFPEEKWLPI-VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +++ + ++   E++L + V        + +       +  +   F      +RG    
Sbjct: 132 CREFAKKWVDIQSEEFLRLGVTGDFDNPYLTMNYQSEAIIADELMKFAKSGQLYRGSKPI 191

Query: 273 IRDIIDN--LARQGYVYE 288
           +  +++   LA     YE
Sbjct: 192 MWSVVERTALAEAEIEYE 209



 Score = 37.2 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 88/247 (35%), Gaps = 47/247 (19%)

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------- 328
           D LA +      I     ++       +  +  F S    DD+D    K D         
Sbjct: 557 DELAAK------IKTAFAAEGADAWYAEGAKERFLS-GFVDDLDG-WQKVDDILDVWFDS 608

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLC 386
           GS   F       +   +   D  +Y+ GSD   G+      +  +   + +A  + +L 
Sbjct: 609 GSTHAFCLQ---QRDDLKWPAD--LYLEGSDQHRGWFHSS--LLESCGTRGRAPYDAVLT 661

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
               +  DG   KMSK  G+ +T + V+ + G+D +R  +     SE  D    K   Q+
Sbjct: 662 HGFVMAEDGT--KMSKSKGNTVTPQDVIKQSGADILRLWVSSADYSE--DLRLGKTILQT 717

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVH-LAE 504
             +       AY + R+  R                +     +  D  EL+ L++H L+E
Sbjct: 718 NID-------AYRKLRNTLRWM--------LGTLAHDKGADVAHADMPELERLMLHRLSE 762

Query: 505 YPRVIEN 511
              V+  
Sbjct: 763 LDVVVRE 769


>gi|301786953|ref|XP_002928911.1| PREDICTED: LOW QUALITY PROTEIN: valyl-tRNA synthetase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 1637

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 22/199 (11%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           +     G   ++     N TG +H+GH     + D L 
Sbjct: 671 YVEAAWYSWWVREGFFKPEYQTKLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 730

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +V      + AG     +     W+ +                GV    + +
Sbjct: 731 RWHRMCGDQVLWVPGSDHAGIATQAVVEKQLWKER----------------GVRRHELSR 774

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH-RGDP 270
           E   ++  E+  + EEK   I +   +QA+   +  D +   +   +   + +    G  
Sbjct: 775 E---EFLREVWKWKEEKGGEISEQ--LQALGASLDWDRECFTMDAGLLDVDTEVIPXGSS 829

Query: 271 SPIRDIIDNLARQGYVYEG 289
           + + +    L   G +Y  
Sbjct: 830 AAVTEAFVRLYEAGLLYRS 848


>gi|260598797|ref|YP_003211368.1| glutamyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217974|emb|CBA32619.1| Glutamyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 471

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 62/456 (13%), Positives = 130/456 (28%), Gaps = 90/456 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A                     Q     L +     + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFAR-------------------NQGGEFVLRIEDTDLER 48

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                 +                 + D  +   L + E  +    +         +I + 
Sbjct: 49  STPEAIE----------------AIMDGMNWLSLEWDEGPYFQTKR---FDRYNAVIDEM 89

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRD----IIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           L A    +  + S++         +        D   R  + +     P   +     D 
Sbjct: 90  LAA-GTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQD- 147

Query: 305 DRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
               ++F   + G       +  D  + ++DGS TY   +       ++    ++I   G
Sbjct: 148 --GSVVFDDQIRGPIEFSNLELDDLIIRRTDGSPTY---NFCVVVDDWDMEITHVIR--G 200

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     R   +  A+        V L   V +       K+SKR G    +++  D  
Sbjct: 201 EDHINNTPRQINILKALGAP-----VPLYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGY 255

Query: 418 GSDSVRFMMLW----------RKNSELLDFDFCKV--KEQSKENPVFYVQYAYARCRSIF 465
             +++   ++               E++ F       K  S  N    +   +    ++ 
Sbjct: 256 LPEALLNYLVRLGWSHGDQEIFSREEMIKFFALDAVSKSASAFNTDKLLWLNHHYINTLA 315

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
              + +   L + +   N+   ++       +L+  L E  + ++             Y 
Sbjct: 316 --PEYVATHLQWHIEQENI---DTRNGPQLAELVKLLGERCKTLKEMAQT------CRYF 364

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
           Y+    F            LR V     ++   +L 
Sbjct: 365 YE---DFSEF-DADAAKKHLRPVARQPLEVVRDKLA 396


>gi|254714218|ref|ZP_05176029.1| glutamyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717654|ref|ZP_05179465.1| glutamyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261219495|ref|ZP_05933776.1| glutamyl-tRNA synthetase 2 [Brucella ceti M13/05/1]
 gi|261321990|ref|ZP_05961187.1| glutamyl-tRNA synthetase 2 [Brucella ceti M644/93/1]
 gi|260924584|gb|EEX91152.1| glutamyl-tRNA synthetase 2 [Brucella ceti M13/05/1]
 gi|261294680|gb|EEX98176.1| glutamyl-tRNA synthetase 2 [Brucella ceti M644/93/1]
          Length = 473

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|253582717|ref|ZP_04859938.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835587|gb|EES64127.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 869

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                K         I    N +       +  +   P+G +HVGH R   +GD ++   
Sbjct: 7   KEVEAKWQKKWADENIFKTENSVSGKENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYK 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMKGYNV 73


>gi|227830519|ref|YP_002832299.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227456967|gb|ACP35654.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 944

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|220903664|ref|YP_002478976.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782389|sp|B8J3R3|SYI_DESDA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219867963|gb|ACL48298.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 938

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 113/328 (34%), Gaps = 45/328 (13%)

Query: 208 HVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISE 262
            +  E  D  +  L    EE +W+P      +  M++   D      +   +     + E
Sbjct: 419 FISMEKNDLRTRALKAIDEEVRWIPAWGRERIHNMVEFRPDWCISRQRQWGVPILALLCE 478

Query: 263 DDFHR-GDPSPIRDIIDNLARQ----GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D      DP+ +++I    A+      Y YE  L     +    C         R T + 
Sbjct: 479 DCGEAWNDPAWMQEIAARFAKHPTGCDYWYEAELKDVVPEGLA-CPHCGGNHWKRETDIL 537

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSE 376
           D      +  D   ++     A  + + E GF   +Y+ GSD   G+      V+     
Sbjct: 538 D------VWFDSGTSFA----AVLEKRPELGFPADLYLEGSDQHRGWFHSSLLVSEGTRG 587

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF---MMLWRKNSE 433
                 VL    V    DG   KMSK  G+ I  + ++++ G++ VR     + +R++  
Sbjct: 588 CAPYRAVLTHGYVV---DGDGRKMSKSVGNVIAPQELIEKFGAEIVRLWVSSVEYREDIR 644

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
           L D    ++ +            AY R R+  R    +    D        + +    D 
Sbjct: 645 LSDEILGRLVD------------AYRRIRNTCR--FIMGNLSDITAHDLLSLDRLQPLDR 690

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKL 521
             L +          ++ A +  + +K+
Sbjct: 691 FALDVA---GRVHERVQQAYMDFDFHKV 715


>gi|168213447|ref|ZP_02639072.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714987|gb|EDT27169.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 514

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWIAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPIEGFEDKRVYVWIDALLAYVTASKKVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    D+ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|229581908|ref|YP_002840307.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012624|gb|ACP48385.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 944

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 29/196 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       Y  N     +K         P  P H+GH R  V GD LA      G
Sbjct: 5   AHKWQTKWEEAKVYESNPNSNRSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y V     ++    G  I  +A         A+   D +L E +     +  +  ++  +
Sbjct: 65  YNVLFPMAFHY--TGTPIMAMA--------DAIAKGDKELIETF---KDIYEISPDVIPR 111

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            S  L              +      + I+  ++ + +  D             S +   
Sbjct: 112 MSDPL--------------FMANYFKEDIKTSMREIGLGIDWRREFTTIDPEFSSFVTWQ 157

Query: 277 IDNLARQGYVYEGILP 292
              L  +GYV +   P
Sbjct: 158 FHKLQSKGYVVKDTHP 173


>gi|34498124|ref|NP_902339.1| valyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81655316|sp|Q7NUM8|SYV_CHRVO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|34103979|gb|AAQ60339.1| valyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 939

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 67/249 (26%), Gaps = 37/249 (14%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L+ SY    L +           +  ++        I+    N TG +H+GH     + D
Sbjct: 4   LAKSYEPGDLERRWYQHWEQAGYFKPSMDTSKPSFAIQLPPPNVTGTLHMGHAFNQTIMD 63

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G+        + AG     +                               
Sbjct: 64  GLTRFYRMKGHNTLWVPGTDHAGIATQIV------------------------------- 92

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V ++LAD+      +   E +   + ++  ++    I   ++ +    D           
Sbjct: 93  VERQLADQ-GLNRHDMGREAFTSKIWEWKEKSG-GTITSQMRRVGCSVDWDREYFTMDDV 150

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               + ++   L  QG +Y G               D + +          +  P++ SD
Sbjct: 151 RAEVVTEVFVRLYEQGLIYRGKRLSNWDAKLGTAISDLEVVSEEEDGHMWHIKYPVVGSD 210

Query: 329 GSYTYFAAD 337
              T     
Sbjct: 211 EFVTVATTR 219


>gi|255072177|ref|XP_002499763.1| predicted protein [Micromonas sp. RCC299]
 gi|226515025|gb|ACO61021.1| predicted protein [Micromonas sp. RCC299]
          Length = 530

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 57/321 (17%), Positives = 107/321 (33%), Gaps = 47/321 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV------- 146
           +   +   ++  V +  +    +      V + F + +PTG +HVG  R A+        
Sbjct: 8   NRRSVAAPVTRCVATESKIEIKVPPNDGTVRVRF-APSPTGNLHVGGARTALFNWLYARR 66

Query: 147 --GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
             G  +  +        TRE    DA      +   + W         D D P G Y   
Sbjct: 67  MGGKFILRVEDTDTARSTRES--EDA------MVRDLKWLGLDWDEGPDVDGPYGPYRQS 118

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
               + K+LA +   E   +P         D  + AM +    + K L  ++        
Sbjct: 119 ERGAIYKQLAQQLVDEGYAYP-----CFCTDEELAAMKEEQ--EAKKLPPKYMG------ 165

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                 +  ++ +D    +G  +      P+ +  +  DM R ++ + +  +GD     L
Sbjct: 166 ---KWATASKEEVDAEMAKGTPHTYRFRVPEGERVEIDDMIRGKVGWDTDTLGDF---VL 219

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           L+S+G   Y   +          G  +++     +H     R   V  A+   +     +
Sbjct: 220 LRSNGMPVY---NFCVAVDDATMGITHVLR--AEEHLPNTLRQALVYDALKFPRPTFGHM 274

Query: 385 LCELVRLYRDGMPIKMSKRAG 405
                 L       K+SKR G
Sbjct: 275 -----SLILAPDRSKLSKRHG 290


>gi|139436956|ref|ZP_01771116.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
           25986]
 gi|133776603|gb|EBA40423.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
           25986]
          Length = 925

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 16/176 (9%)

Query: 343 CKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            + E  +   +Y+ GSD   G+ +     +   +       V+         DG   KMS
Sbjct: 554 YRPELEYPADVYLEGSDQHRGWFQSSLLTSVGANGHAPYKAVVSQGF---TLDGQGRKMS 610

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ I    V DE+G+D +R  +     S  +  D   +   S          AY R 
Sbjct: 611 KSLGNVIDPNKVCDEMGADIIRLWVASVDTSSDVSIDHEILARTSD---------AYRRF 661

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           R+  R    +  +L+    P       ++    +  ++  L +    +++A  + E
Sbjct: 662 RNTLR---FLLSELEGQFEPETDGVAFADLLPLDKLMVARLTQVQAEVDDAYASYE 714


>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 133/386 (34%), Gaps = 67/386 (17%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D  +  L    E  W P   +  +  M++  R D      +   +   +F +E+    
Sbjct: 414 IKDFRNELLEAVKETNWYPAWGETRLFNMVRD-RGDWCISRQRVWGVPIPVFYAENGEEI 472

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                I  + +     G            + EG   P         + D   + F S   
Sbjct: 473 ITDETIEHVSNLFREHGSNIWFEREAKELLPEGFTHPGSPNGQFTKETDIMDVWFDS--- 529

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      LL+ D        DL       +R  D  +Y+ GSD   G+     + A AV+
Sbjct: 530 GSSHQAVLLERD--------DL-------QRPAD--LYLEGSDQYRGWFNSSLSTAVAVT 572

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL         DG   KMSK  G+ +    V++++G+D +R  +        +
Sbjct: 573 GKAPYKGVLSHGF---TLDGEGRKMSKSIGNVVVPAKVMNQLGADILRLWVASVDYQADV 629

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +K+ ++          Y + R+ FR    +  +LD      + +  E+  +  +
Sbjct: 630 RVSDAILKQVAE---------VYRKIRNTFR---FLLGNLDDFNPATDSVSFENLREVDQ 677

Query: 496 LQLIVHLAEYPRVIENATIAQEP----YKLAFYL-YDLASVFHGH-----WSHGRENPRL 545
             L+  L +  + +  +    E     + +  +   DL++ +        +   ++N   
Sbjct: 678 FMLVK-LNKLIKNVRESYDRYEFASIYHAVNNFCTLDLSAFYLDFAKDVLYIEAKDNAER 736

Query: 546 RFVQANNRKLTMMRLQLVHAVASIIN 571
           R +Q     L    + L   VA I++
Sbjct: 737 RAIQTV---LYESLIALTKLVAPILS 759


>gi|329943023|ref|ZP_08291797.1| valyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287606|ref|YP_004422507.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848179|emb|CBY17180.1| valyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506993|gb|ADZ18631.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814570|gb|EGF84560.1| valyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914857|gb|AEB55690.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 940

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 60/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  L + L +       +            I     N TG +H+GH     + D L   
Sbjct: 11  DPKGLEEKLYAFWEESNMFVAQAASDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+EV      + AG    T+                               V + L
Sbjct: 71  KRMSGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   ++F  E++L  V  +  ++   +I   L+ L    D               +
Sbjct: 100 YSSLGKRRVDFSREEFLEHVWQWKEKSE-GVILSQLRQLGCSCDWSRLRFTMEPLANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G++Y G          Q    D +
Sbjct: 159 KKAFKILFDKGHIYRGNYLVNWDPVLQTALADDE 192


>gi|301633567|gb|ADK87121.1| leucine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 793

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 341 FKCKYERGFDNMIYVMGSDHS-GY-----VKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            K  +ER     +YV G++H+  +               +   K     L+ + + L  D
Sbjct: 507 AKDLFERYLPVDLYVGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPFKKLINQGMVLGPD 566

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           G   KMSK  G+ I    ++D  G+D++R  ++
Sbjct: 567 GK--KMSKSKGNTINPTPLIDSHGADALRLYLM 597


>gi|300811526|ref|ZP_07092017.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497493|gb|EFK32524.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 804

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 104/313 (33%), Gaps = 52/313 (16%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQH--DIFISE----DDFHRGDPSPIRDIIDNL 280
           E+    + D+  +  +   + + K  +       +  E      +  G+ + + +  D L
Sbjct: 387 EEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPE--DEL 444

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +      I P    ++      D   ++  +   G      + +  GS  YF   +  
Sbjct: 445 PLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWAGSSWYFLRYIDP 504

Query: 341 FKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELV 389
              K     + +       +Y+ G++H+     Y +    V   +     +         
Sbjct: 505 HNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTK-----EPFQ 559

Query: 390 RLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKE 444
           +LY  G+      KMSK  G+ +    VVDE G+DS+R + M     +  +D+D      
Sbjct: 560 KLYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWD------ 613

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
              +N             S  ++  D       +    + IP E   D ++ +L      
Sbjct: 614 ---DNGP-----------SGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKI--- 656

Query: 505 YPRVIENATIAQE 517
           Y   ++  T   E
Sbjct: 657 YNETVKTVTEHFE 669


>gi|294496309|ref|YP_003542802.1| leucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667308|gb|ADE37157.1| leucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 961

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 52/179 (29%), Gaps = 13/179 (7%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +     + S  +          K  I        G +H GH R   +GD +A      GY
Sbjct: 11  ENRWQNIWSQDKVFEAEPDSRDKYFITIPYPYLNGNLHAGHTRTFTIGDVIARHKRMQGY 70

Query: 160 EVT--REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELAD 215
            V     +++   G  I  LA  +  R  Q +  Y+N   +P+    G+          +
Sbjct: 71  NVLYPMGFHV--TGTPIVGLAELIANREPQTMDVYSNYHGIPKNILEGL-------NTPE 121

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           K         E+    I      +       +  K         + E         P++
Sbjct: 122 KIVEYFSVEAEKAMRSIGYSIDWRRKFTTTDETYKKFIEWQYNLLYEKGLIVKGSHPVK 180


>gi|296087130|emb|CBI33504.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 85/343 (24%), Gaps = 91/343 (26%)

Query: 58  GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117
            L P   A  + AR   +    S   A         +     + + +   S   +  NL 
Sbjct: 35  HLKPRFFA--VAAR--ENDVFTSPETAKP----FDFTSE---ERIYNWWDSQGYFKPNLD 83

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
                  I     N TG +H+GH     + D +       G                   
Sbjct: 84  RGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGR------------------ 125

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                              P  + PG     +  +L  +    +L     K   + +D  
Sbjct: 126 -------------------PTLWIPGTDHAGIATQLVVE---RMLASEGIKRAELSRDEF 163

Query: 238 VQAMMKI-------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            + + +        I + +K L    D               + +    L  +G +Y+G 
Sbjct: 164 TKRVWEWKEKYGGTITNQIKRLGASCDWTREHFTLDEQLSRAVIEAFVRLHERGLIYQGS 223

Query: 291 LPPPKSKTTQKCDMDRK----------------------------QLLFRSTMVGDDVDR 322
                S   Q    D +                                  T+ G D   
Sbjct: 224 YMVNWSPNLQTAVSDLEVEYSEEPGTLYYIKYRVAGGSKSDYLTIATTRPETLFG-DTAI 282

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF----DNMIYVMGSDHS 361
            +   D  Y+ +   +A     + R      D +I ++   H 
Sbjct: 283 AVHPQDDRYSRYIGRMAIVPMTFGRHVPIISDRLISIVDKAHH 325


>gi|13508123|ref|NP_110072.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501026|sp|P75398|SYL_MYCPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1674141|gb|AAB96101.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 793

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 341 FKCKYERGFDNMIYVMGSDHS-GY-----VKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            K  +ER     +YV G++H+  +               +   K     L+ + + L  D
Sbjct: 507 AKDLFERYLPVDLYVGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPFKKLINQGMVLGPD 566

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           G   KMSK  G+ I    ++D  G+D++R  ++
Sbjct: 567 GK--KMSKSKGNTINPTPLIDSHGADALRLYLM 597


>gi|315651952|ref|ZP_07904954.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485781|gb|EFU76161.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 652

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 20/175 (11%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ I    +VD  G D+VR+ +L            +  + E+   +    +   
Sbjct: 300 KMSKSKGNVIYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERFNSDLANVLGNL 359

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            +R  S+  +  D       D      +  E + D  ++ L+         +E       
Sbjct: 360 VSRTISMTNKYFDGVLTDTKDESVAGAM--EVDTDLKDVALM--------TVEKVVRKMS 409

Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             ++A  + ++ ++F     +   +    ++ A        RL       +++ +
Sbjct: 410 ELRVADAISEIWTLFKRC--NKYIDETTPWILAKEED-KKSRL------QTVLYN 455


>gi|210632458|ref|ZP_03297386.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
 gi|210159553|gb|EEA90524.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
          Length = 493

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 55/240 (22%)

Query: 353 IYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I + G          E   A A                 L  DG   KMSK  G+F TL 
Sbjct: 220 IDIHGGGSDLAFPHHENECAQATCAWHEGFANTWMHTGMLLVDGE--KMSKSLGNFFTLA 277

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+++  + ++R +ML       LDF + ++  +  EN +  +    A      + A D 
Sbjct: 278 EVLEKHSAAALRLLMLQTHYRSPLDFSWERL--EGAENSLARI----AGTCRNLKWAADH 331

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK---------LA 522
                       +                        +E A    E            +A
Sbjct: 332 VEGEPNAELAEALTAA---------------------MEKAAADYEACMDDDFNTAGAIA 370

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582
            Y + L +  + +         L        ++T        A A++I   L  +GVE P
Sbjct: 371 AY-FQLVTEANKY---------LEQAAGAVDEVT------ARACAAVIAGALAQLGVELP 414


>gi|195380978|ref|XP_002049233.1| GJ20865 [Drosophila virilis]
 gi|194144030|gb|EDW60426.1| GJ20865 [Drosophila virilis]
          Length = 1048

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 60/210 (28%), Gaps = 33/210 (15%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+  K        G +        G  + +     N TG +H+GH     + D +     
Sbjct: 104 SWWEKQGFFSPEYGRDSIDAPNPNGKFIMV-IPPPNVTGSLHLGHALTNAIEDAITRYQR 162

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG     +   + WR +                G+    +G+E   
Sbjct: 163 MKGRTTLWVPGCDHAGIATQVVVEKLLWRDE----------------GLSRHDLGRE--- 203

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K+   + N+  EK                I D LKAL   +D               + +
Sbjct: 204 KFIERIWNWRREKG-------------DRIYDQLKALGSSYDWTRVNFTMDPKLCRAVTE 250

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               L  QG +Y        S T +    D
Sbjct: 251 AFVRLHEQGAIYRSSRLVNWSCTLRSAISD 280


>gi|150401533|ref|YP_001325299.1| glutamyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187643674|sp|A6UW15|SYE_META3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|150014236|gb|ABR56687.1| glutamyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 561

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 71  RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130
            + ++     +           L+P  L    +       E     + +G  V + F + 
Sbjct: 59  NMPLNEQQAKLE---------SLAPELLNSKPAE--RKKKELQLKNVKEGAPVVMRF-AP 106

Query: 131 NPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWR 184
           NP+GP+H+GH R AV+ D  A       ++     +  R         ++    L     
Sbjct: 107 NPSGPLHLGHARAAVLNDYFAKKYNGKLILRLEDTDPKRVM---PEAYEMIKEDLEWLGV 163

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA-DKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
               +      LP  Y  G  L  +G     D  + E           + +D  V+  ++
Sbjct: 164 KIDDVIVQSDRLPIYYEYGTKLIEMGHAYVCDCEAEEFRELRANGKPCVCRDLGVEKNLE 223

Query: 244 IIRDDLK 250
           +    L 
Sbjct: 224 LWNKMLN 230


>gi|78221572|ref|YP_383319.1| isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78192827|gb|ABB30594.1| Isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 923

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 82/250 (32%), Gaps = 41/250 (16%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D+         +  G + P   K+  + +MD   + F S +                   
Sbjct: 499 DLWYEKEAAELLPPGTVCPQCGKSAFEKEMDILDVWFDSGV------------------- 539

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +  A  + + E G    +Y+ GSD   G+       +           VL    V    
Sbjct: 540 -SHAAVLENRPELGSPANMYLEGSDQHRGWFHSSLLASVGTRGTAPYKEVLTHGFVV--- 595

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ +    V+ + G++ +R  +  +   + +      +   ++      
Sbjct: 596 DGSGRKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQDYRDDVRISQEILTRLAE------ 649

Query: 454 VQYAYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
              AY R R+  R       D D   D+ P   + +   +   +L+++         +  
Sbjct: 650 ---AYRRIRNTCRYLLGNLYDFDPATDMVPFGEMTELDRWALHQLEVLK------EKVFT 700

Query: 512 ATIAQEPYKL 521
           A    E + L
Sbjct: 701 AYNEYEFHIL 710


>gi|116514487|ref|YP_813393.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274781|sp|Q049B7|SYL_LACDB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116093802|gb|ABJ58955.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 804

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 104/313 (33%), Gaps = 52/313 (16%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQH--DIFISE----DDFHRGDPSPIRDIIDNL 280
           E+    + D+  +  +   + + K  +       +  E      +  G+ + + +  D L
Sbjct: 387 EEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPE--DEL 444

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +      I P    ++      D   ++  +   G      + +  GS  YF   +  
Sbjct: 445 PLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWAGSSWYFLRYIDP 504

Query: 341 FKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELV 389
              K     + +       +Y+ G++H+     Y +    V   +     +         
Sbjct: 505 HNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTK-----EPFQ 559

Query: 390 RLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKE 444
           +LY  G+      KMSK  G+ +    VVDE G+DS+R + M     +  +D+D      
Sbjct: 560 KLYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWD------ 613

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
              +N             S  ++  D       +    + IP E   D ++ +L      
Sbjct: 614 ---DNGP-----------SGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKI--- 656

Query: 505 YPRVIENATIAQE 517
           Y   ++  T   E
Sbjct: 657 YNETVKTVTEHFE 669


>gi|323451800|gb|EGB07676.1| hypothetical protein AURANDRAFT_71793 [Aureococcus anophagefferens]
          Length = 1349

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 89/302 (29%), Gaps = 53/302 (17%)

Query: 254  IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            ++ + + +E +   G      D+      +   Y   L   + K     + D   L  +S
Sbjct: 960  VRDECYYTESELVDGKAPTGADV--EWKAKEPSYFFKLSAFREKLIDLYEGDEDALGPKS 1017

Query: 314  TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----------- 356
                   +  L    G       DL+  +  ++ G       D++IYV            
Sbjct: 1018 RR-----NEVLSFLKGEEL---RDLSISRTTFKWGLSVPGDDDHVIYVWVDALANYLTAL 1069

Query: 357  --GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKM 400
              G D   +          V +   + + +    + L  D                  K+
Sbjct: 1070 GYGDDDDEWRDMWAGATHVVGKDILRFHAVYWPALLLAADLPPPKKIFAHGWWTKDGAKI 1129

Query: 401  SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYA 459
            SK  G+ +    ++ + G D+ R+ +L         DF    +   +       V     
Sbjct: 1130 SKSLGNVVVPAELLADYGVDATRYFLLSEVPFGGDGDFSRTAMLAAANGFLANAVGNLCQ 1189

Query: 460  RCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFD-----TSELQLIVHLAEYPRVIE 510
            RC ++  +    A    PD   D     +       D        L+L   L+E   V+ 
Sbjct: 1190 RCCAMIAKNCGGAAPALPDEPTDDDAALLAAARGLGDAMRPHADALRLDGALSEVEAVVR 1249

Query: 511  NA 512
             A
Sbjct: 1250 AA 1251


>gi|153810490|ref|ZP_01963158.1| hypothetical protein RUMOBE_00871 [Ruminococcus obeum ATCC 29174]
 gi|149833669|gb|EDM88750.1| hypothetical protein RUMOBE_00871 [Ruminococcus obeum ATCC 29174]
          Length = 500

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 113/303 (37%), Gaps = 58/303 (19%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+         + +
Sbjct: 27  APSPTGRMHVGNLRTALYAYLIAKHEGGDFILRI-----EDTDQERYVE------GAVDI 75

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                    L +++    +  Y G Y++       L  KY+ +L+   +  +        
Sbjct: 76  IYRTMAGTGLIHDEGPDKDKGY-GPYVQSERQASGLYLKYAQQLIEQGD-AYYCFCGPEE 133

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEGILPP 293
           +++M +++     ++  +  + +S+++  R    G+P  IR                   
Sbjct: 134 LESMKRVVAGKEISIYDKRCLRLSKEEVQRRLDAGEPHVIR----------------FNM 177

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P   TT   D+    +   +  +    D  L+KSDG  TY   + A     +  G  ++ 
Sbjct: 178 PTEGTTTFHDVIYGDITVNNEEM---EDLILIKSDGYPTY---NFANVIDDHLMGITHV- 230

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G+++     +   +  A   +     + +     L  +    K+SKR+G   +   +
Sbjct: 231 -VRGNEYLSSAPKYNRIYEAFGWE-----IPVYVHCPLITNEEHQKLSKRSGHS-SYEDL 283

Query: 414 VDE 416
           +D+
Sbjct: 284 LDQ 286


>gi|118442859|ref|YP_877695.1| glutamyl-tRNA synthetase [Clostridium novyi NT]
 gi|166200170|sp|A0PZ93|SYE_CLONN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|118133315|gb|ABK60359.1| glutamyl-tRNA synthetase [Clostridium novyi NT]
          Length = 487

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 95/288 (32%), Gaps = 33/288 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A        +        D G  +      ++   +  
Sbjct: 11  APSPTGYMHVGNLRTALYTYLIA---KHENGKFILRIEDTDQGRYVEGAVDVIYKTLEMT 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D     G   G Y++   K    +Y+ EL+   E  +        + + +K   D 
Sbjct: 68  GLKHDEGPDVGGPVGPYIQSERKGTYMEYAKELVEKGE-AYYCFCDKERLDS-LKENSDT 125

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K      ++   E              ++   + G  Y      P    T   D     
Sbjct: 126 FKYDGHCRNLSKEE--------------VEENLKNGVPYVIRQKNPLDGVTTFEDEIYGT 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   S    +  D  L+KSDG  TY   + A     +  G  ++  V G+++     +  
Sbjct: 172 I---SVDNSELEDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGNEYLSSAPKYN 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
            +  A          + C  +         K+SKR GD  +   ++ +
Sbjct: 224 RLYNAFGWDIP--TYVHCPPIM---KDAHNKLSKRNGDA-SFEDLLKK 265


>gi|300707479|ref|XP_002995945.1| hypothetical protein NCER_101032 [Nosema ceranae BRL01]
 gi|263511682|sp|C4V924|SYVC_NOSCE RecName: Full=Probable valyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Valine--tRNA ligase; Short=ValRS
 gi|239605191|gb|EEQ82274.1| hypothetical protein NCER_101032 [Nosema ceranae BRL01]
          Length = 883

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 56/196 (28%), Gaps = 38/196 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + +  ++  +S   +      +  K  +     N TG +H+GH     + D +   
Sbjct: 48  DPMPVEQKWNNYWLSNNLFEPQE--RSNKFVMCMPPPNITGSLHIGHSMMIAIQDAICRY 105

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           M    YEV      + AG    T+ +    + ++             Y          + 
Sbjct: 106 MRLINYEVLYLPGTDHAGIATQTVVMKQLEKEKKT------------YNRESFLEATWKW 153

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            + Y S +L+                          K L    D    +     G    +
Sbjct: 154 KENYGSRILDQ------------------------FKRLGTSADFSRQKFTMDAGMNKAV 189

Query: 274 RDIIDNLARQGYVYEG 289
            +   +L  +G +Y  
Sbjct: 190 TEAFCSLYEKGLIYRD 205


>gi|227872011|ref|ZP_03990396.1| glutamate--tRNA ligase [Oribacterium sinus F0268]
 gi|227842154|gb|EEJ52399.1| glutamate--tRNA ligase [Oribacterium sinus F0268]
          Length = 470

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 106/300 (35%), Gaps = 42/300 (14%)

Query: 136 MHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           MHVG+ R  +    +A       L+     +  RE        +     +          
Sbjct: 1   MHVGNLRTGMYAYLIAKHEGGDFLLRIEDTDQERE-------VEGAVDIIRRTLEATGLF 53

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           ++   D P    P V  + V   +   Y+ +L++  E  +     +  ++++   +  + 
Sbjct: 54  WDEGPDNPGDCGPYVQSERVKTGVYMDYAKKLVDKGE-AYYCFCDEERLKSLQTEVNGE- 111

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
                      +   + +   S  ++ ++   +QG  +      P   +T   D     +
Sbjct: 112 -----------TLFHYDKHCLSLTKEEVEEKLKQGLPFVIRQNNPTEGSTTFHDELYGDV 160

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
              ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     + + 
Sbjct: 161 TVENSELD---DMVLIKSDGYPTY---NFANVIDDHLMGITHV--VRGNEYLSSSPKYQR 212

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVRFMML 427
           +  A   +  ++         L  D    K+SKR+G   +   ++D+  V    V F+ L
Sbjct: 213 LYDAFGWESPKLIHC-----PLITDENHKKLSKRSGHS-SFEDLIDQGFVAEAVVNFVAL 266


>gi|254459318|ref|ZP_05072739.1| isoleucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083931|gb|EDZ61222.1| isoleucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 919

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 5/99 (5%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +YV GSD   G+ +    ++ AV  K     VL         D    KMSK  G+ I   
Sbjct: 566 LYVEGSDQHRGWFQSSLFLSCAVEHKAPYKAVLTHGF---TVDEKGEKMSKSKGNVIAPE 622

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            V+ E GS+ +R  +        L      + +Q+ EN 
Sbjct: 623 KVLKEYGSEILRLWVASSDYQGDLKIS-DGILKQTSENY 660


>gi|116629831|ref|YP_815003.1| isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095413|gb|ABJ60565.1| Isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 944

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 106/321 (33%), Gaps = 58/321 (18%)

Query: 214 ADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
            DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD   
Sbjct: 432 VDKFRDQILAEIEKANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPI 490

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  +     ++G            + EG           + + D   + F S   
Sbjct: 491 VTPETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDS--- 547

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + + DG                  GF   +Y+ GSD   G+       + AV+
Sbjct: 548 GSSWAGVMKERDG-----------------LGFPADLYLEGSDQYRGWFNSSLITSVAVT 590

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +
Sbjct: 591 GKAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDV 647

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +++ ++         +Y + R+  R       D D                  E
Sbjct: 648 AVSQDILRQSAE---------SYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYME 698

Query: 496 LQLIVHLAEYPRVIENATIAQ 516
           ++L        R+IE A  A 
Sbjct: 699 IKL-------NRLIEEAIEAY 712


>gi|114707214|ref|ZP_01440112.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Fulvimarina
           pelagi HTCC2506]
 gi|114537410|gb|EAU40536.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Fulvimarina
           pelagi HTCC2506]
          Length = 965

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +   +     +       +  L RD    KMSK  G+ I    +++EVG+D++
Sbjct: 579 FFWVARMMMMGLHF-TGKEPFHTVYMHPLVRDKFGQKMSKSKGNGIDPLDLIEEVGADAL 637

Query: 423 RFMM 426
           RF +
Sbjct: 638 RFTL 641



 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 45/160 (28%), Gaps = 31/160 (19%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       G +V  +   + AG     +         +  
Sbjct: 45  PNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGTDHAGIATQMVVERQMAASGE-- 102

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                                       S        EK++  +  +  ++  K I + L
Sbjct: 103 ----------------------------SQTRREMGREKFVERIWQWKAESGGK-ISEQL 133

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           K L    D          G    + ++   L  +G +Y  
Sbjct: 134 KRLGASLDWSRERFTMDEGLSEAVLEVFVRLYEEGLIYRD 173


>gi|91081927|ref|XP_966456.1| PREDICTED: similar to GA18268-PA [Tribolium castaneum]
 gi|270007328|gb|EFA03776.1| hypothetical protein TcasGA2_TC013887 [Tribolium castaneum]
          Length = 515

 Score = 43.0 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 103/291 (35%), Gaps = 52/291 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A   + +G  + R   I D     + L      + Q  
Sbjct: 35  APSPTGFLHLGGLRTALYNYFFAK--SCNGAFILR---IED--TDQSRLVEGAIEQLQHD 87

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
           L      + E    G   G Y++     +  ++ + LLN       F  EK L +++  +
Sbjct: 88  LNWAGIQIDEGPSSGGSHGPYIQSQRLHIYREHVTTLLNNGSAYHCFCTEKRLELLRREA 147

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++     IR+  K  N    +   E              ++    QG +   +       
Sbjct: 148 IR-----IREIPKYDNRCRSLKPEE--------------VEEKLAQG-IQSCVRFKLAPG 187

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
                D+    L +   +  ++ D  ++KSDG  TY  A++       +     + +V+ 
Sbjct: 188 VQNYADLIYGSLNY--DVAANEGDPVIVKSDGFPTYHFANV------VDDHLMKVSHVLR 239

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           G +      +   +  A   +       L   + L  +    K+SKR GD 
Sbjct: 240 GVEWQISTPKHIMMYRAFGWEPP-----LFGHLPLLMNPDGSKLSKRQGDI 285


>gi|251773415|gb|EES53964.1| valyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 889

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 41/220 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D +A     +G +V     ++ AG     +        ++ L
Sbjct: 55  PNITGRLHMGHALNLTIQDVMARYHRMAGDDVLWIPGVDHAGIAAQNVV-------EKKL 107

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                D                           +   ++++  V ++   ++   I D +
Sbjct: 108 RAEGVDFK-------------------------SLGRDEFVARVWEWK-DSIGSGIGDQI 141

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP-------PPKSKTTQKC 302
           + L               G    +R++   L   G +Y                   +  
Sbjct: 142 RRLGASLSWDHERFTMDPGFSRAVREVFVRLYEDGALYRAERMIHWCPRCLTALSDVEVT 201

Query: 303 DMDR-KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
             DR  +L++ +  + ++ ++ L+ +        ADLA  
Sbjct: 202 HQDRVGELVYVTYHLEEEGEKSLVVATTRPETIVADLALA 241


>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|109894895|sp|Q47HK6|SYC_DECAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 456

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 98/326 (30%), Gaps = 81/326 (24%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  VV D +   +  SGY+VT                                  
Sbjct: 37  HLGHARVMVVFDMVYRWLKASGYDVT---------------------------------- 62

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                   Y++++  ++ DK     +   E               +  + +D  AL +Q 
Sbjct: 63  --------YVRNI-TDIDDKIIKRAIENGETI------QQLTNRFIAFMHEDADALGVQR 107

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP-----------KSKTTQKCDMD 305
             +      +  +   + D+I  L   G  Y+                 K       D+ 
Sbjct: 108 PDYEPRATEYVPE---MLDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLR 164

Query: 306 RKQLLFRSTMVGDDVDRPLLK-------------SDGSYTYFAADLAYFKCKYERGFDNM 352
             + +   +   D +D  L K              DG   +     A       + FD  
Sbjct: 165 AGERVEVDSAKQDPLDFVLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFD-- 222

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
             + G          E   A  SE     N +   +   +      KMSK  G+F T+R 
Sbjct: 223 --IHGGGQDLQFPHHENEIAQ-SEGANCCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRT 279

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFD 438
           V+++  ++ VRF +L       L++ 
Sbjct: 280 VLEQFDAEVVRFFILRAHYRSPLNYS 305


>gi|15639085|ref|NP_218531.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025325|ref|YP_001933097.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094392|sp|O83129|SYC_TREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735067|sp|B2S239|SYC_TREPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3322350|gb|AAC65085.1| cysteinyl-tRNA synthetase (cysS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189017900|gb|ACD70518.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291059509|gb|ADD72244.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 520

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 102/355 (28%), Gaps = 52/355 (14%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +   V +           H+G+ R  V  DT+   + F GY VT    I D G    
Sbjct: 17  QPWEHGHVRLYGCGPTVYNYPHLGNLRAYVFQDTVRRTLHFLGYRVTYVMNITDVG---- 72

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVK 234
                       A    D  +      G  +  V     A  +    L   EE  +    
Sbjct: 73  -------HLESDADSGEDKLVRSAQAHGHSVLQVAAHYRAAFFRDTALLGIEEPSIVCNA 125

Query: 235 DYSVQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
              +Q M+  I   L          N+  D+  S   +     + + D+ +         
Sbjct: 126 SDCIQDMIAFIEQLLARGHAYCAGGNVYFDV-RSFPSYESFGSAAVEDVQEG-------- 176

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCK 344
           E       +  T K D     L F  +         D P  +      Y    +      
Sbjct: 177 EDAARARVAHDTHKRDARDFVLWFTRSKFVRHALTWDSPWGR-----GYPGWHIGCSAMS 231

Query: 345 YERGFDNM-IYVMGSDH-SGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMP---- 397
            +       I++ G DH   + +   A   A+      +  +    L+   +        
Sbjct: 232 MKFLGPRCDIHIGGVDHIRVHHRNERAQCEAITGAPWVRYWLHHEFLLMQLQKRAVHADM 291

Query: 398 --------IKMSKRAGDFITLRHVVDEVGSDS-VRFMMLWRKNSELLDFDFCKVK 443
                    KMSK  G F+TL  + +     +  RF +L  +    L F +  +K
Sbjct: 292 GSSVVSSFSKMSKSCGQFLTLSSLQERGFQPADFRFFLLSGQYRTQLAFSWDALK 346


>gi|308183256|ref|YP_003927383.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065441|gb|ADO07333.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 872

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 104/331 (31%), Gaps = 44/331 (13%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  KG +  +     N TG +H+GH     + D LA      GY+   +  ++ 
Sbjct: 29  IDGNEKIQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDH 88

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D                  E  +K    +L   +   
Sbjct: 89  AG--IATQNVVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLG 139

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 140 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERK 199

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPL------ 324
           G +Y         K        R + LF  + +             G  V  PL      
Sbjct: 200 GALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKVILPLINRKIP 259

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
           + +D    +   +      K   G D   Y +G  H             + ++K  +N  
Sbjct: 260 IIAD---LHVEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------ETVKIFDEKGILNAH 309

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
             E   L R     K+ +R  +   L  + +
Sbjct: 310 CGEFENLERLEARDKVVERLKENALLEKIEE 340


>gi|257870820|ref|ZP_05650473.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804984|gb|EEV33806.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 804

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  YF   +          FD +       IY+ G++H+     Y +        +   
Sbjct: 495 GSSWYFLRFIDPHNKNRLADFDKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVV 554

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    V+++ G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSRGNVVNPDDVIEQYGADTLR 600


>gi|256370613|ref|YP_003108438.1| glutamyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009405|gb|ACU52765.1| glutamyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 487

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 85/229 (37%), Gaps = 52/229 (22%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASL--MAFSGYEVTREYYIND 169
            KV + F + +PTGP+H+G  R A+          G  +  +     S Y+   E YI  
Sbjct: 2   KKVRVRF-APSPTGPLHLGSIRTALYNFLFAKKNKGKFILRIEDTDRSRYKSGAENYI-- 58

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
                     S+ W     L  N+    +G Y G Y +    E+  KY   LL       
Sbjct: 59  --------IKSLKWC---GLTVNEGPAMKGNY-GPYRQSERYEIYKKYIKYLLAN----- 101

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
                D++  A         +    + +    + D +  +    + II      G V+  
Sbjct: 102 -----DFAYYA--------FEKKKKKRNYNRKKLDLNISNEKTFKKII-----NGIVFVI 143

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L  PK    +  D  R +++     + +   + ++KSDG+ TY  A++
Sbjct: 144 RLKIPKFFGLKIKDFLRGKIIMNFNSLDE---KIIIKSDGTPTYHLANV 189


>gi|219111249|ref|XP_002177376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411911|gb|EEC51839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1066

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 52/211 (24%), Gaps = 33/211 (15%)

Query: 96  SYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           +  +         S             K  +     N TG +H+GH   A V DTL    
Sbjct: 92  AAWQDWWEKCGYYSCDPKDAVDRPVDEKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWH 151

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+      Y+            SV                           V K L 
Sbjct: 152 RMKGHATL---YV-PGTDHAGIATQSV---------------------------VEKMLM 180

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E+++  V ++      KI    L++L    D               + 
Sbjct: 181 KSEGKSRHDLGREEFVKKVWEWKKDYGSKITNQ-LRSLGSSVDWSRERFTMDEMLSKAVV 239

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           +  +    +G +Y        S   +    D
Sbjct: 240 EAFNRFHEKGLLYRADRLGNWSCALKSAISD 270


>gi|78067313|ref|YP_370082.1| isoleucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728930|sp|Q39DM8|SYI_BURS3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77968058|gb|ABB09438.1| Isoleucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 945

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQTLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|298293832|ref|YP_003695771.1| isoleucyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930343|gb|ADH91152.1| isoleucyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 1019

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 68/206 (33%), Gaps = 27/206 (13%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLK 326
              ++ L     V + I    +++       D     F  T          DD+      
Sbjct: 556 DGTVEILRDD-KVNKRIADAFEAEGADAWYKDGAAQRFLGTDYSANEWHKVDDILDVWFD 614

Query: 327 SDGSYTYFAADLAYFKCKYERGF----DNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQI 381
           S GS   F  ++     K +R F    D ++Y+ GSD   G+       +     +    
Sbjct: 615 S-GSTHAFTLEVRE-DLKVDRAFTGGPDRVMYLEGSDQHRGWFHSSLLESCGTRGRPPYD 672

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            VL    V    D    KMSK  G+ +  + V+   G+D +R  +     S+ L      
Sbjct: 673 VVLTHGFV---LDEQGRKMSKSIGNVVAPQEVIKSSGADILRLWVCASDYSDDLRIGPEI 729

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQ 467
           +K   +          Y + R+  R 
Sbjct: 730 LKTTVE---------TYRKLRNTLRW 746


>gi|163786960|ref|ZP_02181408.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878820|gb|EDP72876.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 505

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 96/289 (33%), Gaps = 40/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTGP+H+G  R A+          GD +  +      +  +  Y+  A    + +  
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKHGGDFVLRI-----EDTDQNRYVEGAE---DYIVE 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W         D    +    G Y +   K L  +Y+ +L++            +   
Sbjct: 62  SLSW----CGIPFDEGPGKNEKFGPYRQSERKHLYKQYADQLISSG-----KAYYAFDTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI--RDIIDNLARQGYVYEGILPPPKSK 297
             +   R   +A            +  R   S +            G  Y      P+ +
Sbjct: 113 EQLDAHRKGHEAEGKTFIYNWHNREKGRLVNSLVLTEAETQAKIEGGEHYVVRFKSPQDE 172

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    D+ R  +   + ++    D+ L KSDG  TY    LA     +     ++I   G
Sbjct: 173 TLLLKDIIRGDISIDTNVLD---DKILFKSDGMPTYH---LANIVDDHLMEITHVIR--G 224

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +    +   + +  A   +  +   L   L    +     K+SKR GD
Sbjct: 225 EEWLPSLALHQLLYDAFGWETPEFAHLPLILKPTGKG----KLSKRDGD 269


>gi|123492419|ref|XP_001326054.1| Valyl tRNA Synthetase [Trichomonas vaginalis G3]
 gi|121908963|gb|EAY13831.1| Valyl tRNA Synthetase, putative [Trichomonas vaginalis G3]
          Length = 523

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     S   +   +      K   + +     N TG +H+GH   A + D +   
Sbjct: 54  NPMKVENAWYSWWENQNFFEPKAADKKFVMIL--PPPNVTGELHLGHALTASIEDAITRY 111

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E       + AG       ++  +R ++ +Y+    L  G Y   Y      + 
Sbjct: 112 HRMCGEESLWVPGTDHAG-------IATQFRVEKKIYDEK-KLHRGEYSREYFLEEAHKW 163

Query: 214 AD 215
            +
Sbjct: 164 VE 165


>gi|108800524|ref|YP_640721.1| valyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869663|ref|YP_939615.1| valyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108770943|gb|ABG09665.1| valyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695752|gb|ABL92825.1| valyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 883

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   +    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPGAVEADIYQGWVEAGYFTADPASDKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++     ++ L  +                     
Sbjct: 77  KRMQGFEVL-------WLPGMDHAGIATQTLVEKQLAVD--------------------- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGAQMRRLGDGVDWSRDRFTMDDGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   +    D +
Sbjct: 164 RTIFKKLYDAGLIYQAERLVNWSPVLETAISDLE 197


>gi|115524575|ref|YP_781486.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122296176|sp|Q07NH8|SYE_RHOP5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|115518522|gb|ABJ06506.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 474

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 97/306 (31%), Gaps = 52/306 (16%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T+  +   + +PTG +H+G  R A+     A     +G ++       D          +
Sbjct: 2   TRPVVTRFAPSPTGFLHIGGARTALFNWLYA---KKTGGKMLLRIEDTDRERSTQPAIEA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +          +     E  + G  +    +  A ++   +              Y+   
Sbjct: 59  IL---------DGMKWLELGWDGDVVYQFSR--AARHREVVETMLAAGAAYRC--YASAE 105

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +  +R+  KA            D    + P  ++  I  L            P   +T 
Sbjct: 106 ELTQMRESAKAEGRTRFYNGLWRDRDPSEAPEGVKPTI-RLKA----------PLTGETV 154

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            +  +  + +     +     D  LL+ DG+ TY    LA     ++ G  ++I   G D
Sbjct: 155 IEDQVQGRVVWQNDNLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHVIR--GDD 205

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     R + +  A+  +   +       + L       K+SKR G           +G 
Sbjct: 206 HLINAARQKQIYDALGWELPTMAH-----IPLIHGPDGSKLSKRHG----------ALGV 250

Query: 420 DSVRFM 425
           D+ R M
Sbjct: 251 DAYRAM 256


>gi|325269572|ref|ZP_08136188.1| glutamate--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988191|gb|EGC20158.1| glutamate--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 505

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 97/279 (34%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGKLIFRIEDTDSNRFVPGAEEYILDSFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  +Y  +LL+            +     ++  R +
Sbjct: 68  GIGFDEGVSFGGEYGPYRQSERREIYKEYVRQLLDAG-----KAYIAFDTPEELEARRKE 122

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           ++    Q+D         R   +  ++ +D L   G  +         +     DM R  
Sbjct: 123 IQNF--QYDAHTRMQ--MRNSLTMSKEEVDGLIDDGQQFVVRFKVEPGEEVHVNDMIRGD 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +  +S ++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VCIKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   + +        L+ L  +G   K+SKR GD
Sbjct: 231 VLLYRAFGWEDSMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|319783175|ref|YP_004142651.1| valyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169063|gb|ADV12601.1| valyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 927

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 79/231 (34%), Gaps = 35/231 (15%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED---D 264
            + K           NF  + W     D+        I   L     Q   +   D    
Sbjct: 391 ELAKPAIASVREGRTNFVPKNWEKTYFDWMENIQPWCISRQLW-WGHQIPAWYGPDGRVF 449

Query: 265 FHRGDPSPIRDIID-NLARQG---YVYEGILPPPKSKTTQKCDMDRKQLLFRS-----TM 315
             + +   +   I+  LA +G      E  L   K       D D     F S     + 
Sbjct: 450 VEKTEEEALSAAIEFYLALEGPWKAWVEDKLENFKPGEILTRDEDVLDTWFSSALWPFST 509

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
           +G   + P LK     TY+  D+         GFD +I+         V R+  +     
Sbjct: 510 LGWPDETPELK-----TYYQTDV------LVTGFD-IIFFW-------VARMMMMGLHFM 550

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           +++    V +  LV   RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 551 DEEPFHTVYVHALV---RDKNGAKMSKSKGNVIDPLDLIDEYGADALRFTL 598


>gi|283956488|ref|ZP_06373968.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792208|gb|EFC30997.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|255020894|ref|ZP_05292950.1| Valyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969685|gb|EET27191.1| Valyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 938

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 56/200 (28%), Gaps = 41/200 (20%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            G    I     N TG +H+GH     + D L       G  V  +   + AG     L 
Sbjct: 33  DGPAYCIMLPPPNVTGTLHMGHAFQDTLMDVLVRTHRMRGERVLWQPGTDHAGIATQMLV 92

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R                  G+  + +G+            F E  W    ++ S 
Sbjct: 93  ERQLQRE-----------------GLERREMGR----------TAFLERVWR--WREASG 123

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG--------I 290
             ++  IR     L    D          G    + ++   L  QG +Y G        +
Sbjct: 124 DRIVHQIR----RLGSSCDWSRQRFTLDSGLSEAVTEVFVRLYEQGLIYRGKRLVNWDPV 179

Query: 291 LPPPKSKTTQKCDMDRKQLL 310
           L    S      + +  +L 
Sbjct: 180 LQTAVSDLEVLSEEEMGKLW 199


>gi|253681728|ref|ZP_04862525.1| glutamate--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561440|gb|EES90892.1| glutamate--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 487

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 92/294 (31%), Gaps = 32/294 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A        +        D G  +      ++   +  
Sbjct: 11  APSPTGYMHVGNLRTALYTYLIA---KHDNGKFILRIEDTDQGRYVEGAVDVIYRTLKMT 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D     G   G Y++   + L   Y+ EL+   +E +        +        D 
Sbjct: 68  GLTHDEGPDIGGPVGPYIQSERRGLYLDYAKELVEK-DEAYYCFCDKERL--------DS 118

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           LK  +             + +       ++     G  Y      P    T   D     
Sbjct: 119 LKETSGTFKYDGHCRSLSKEE-------VEEKLASGIPYVIRQKNPLDGETTFEDEIYGT 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     +  
Sbjct: 172 ITVDNSEL---EDMILIKSDGLPTY---NFANVIDDHLMGITHV--VRGNEYLSSAPKYN 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            +  A              +          K+SKR GD      +      D+V
Sbjct: 224 RLYNAFGWDIPTYIHCPPIM-----KDAHNKLSKRNGDASFEDLLAKGYLKDAV 272


>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 459

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 104/313 (33%), Gaps = 55/313 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D +A  + + GY++T    I D   +I   AL       Q +     ++
Sbjct: 37  HIGHGRTFVCFDVIARYLRYLGYDLTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 96

Query: 197 -----------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                      P+      +       + +K       +  +    +    S +   K+ 
Sbjct: 97  YKDFDALNILRPDFEPRATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLS 156

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R DL+ L     I     + +    +P+  ++  +++     E     P  K      ++
Sbjct: 157 RQDLEQLQAGARI-----EINEIKKNPMDFVLWKMSKPN---EPSWDSPWGKGRPGWHIE 208

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   S  +G+  D     SD  + +   ++A                         +
Sbjct: 209 CSAM--NSKQLGEHFDIHGGGSDLMFPHHENEIA-------------------------Q 241

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
              A           +N  L   + +       KMSK  G+F T+R V++   ++SVR+ 
Sbjct: 242 SCCAHGNQ------YVNYWLHSGMIMVD---KEKMSKSLGNFFTIRDVLNHYDAESVRYF 292

Query: 426 MLWRKNSELLDFD 438
           +L       L++ 
Sbjct: 293 LLTAHYRSQLNYS 305


>gi|209883517|ref|YP_002287374.1| leucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229559997|sp|B6JAI4|SYL_OLICO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209871713|gb|ACI91509.1| leucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 879

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +        G+   RN   +     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  RWQQIWDEKGVFASRNDDSRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYRRAKGH 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|86749798|ref|YP_486294.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572826|gb|ABD07383.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 514

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 98/328 (29%), Gaps = 42/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA      G +V      ++ G ++   A             
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQTAQKEGVETHVLAAR 75

Query: 192 NDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           N     +     G+      +   +++   +      K +    D  + +         +
Sbjct: 76  NAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVW--KRMQANGDIYLDSYAGWYSVRDE 133

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCDMDRKQ 308
           A   + +  + ED   RG      + ++  +   +   Y+  L             D ++
Sbjct: 134 AYYAEDETVVGEDQIRRGPQGTPVEWVEERSYFFKLSAYQDKLLKLYEDQPDFIGPDSRR 193

Query: 309 LLFRSTMVGDDVDRPLLKS--------------------DGSYTYFA-------ADLAYF 341
               S + G   D  + ++                    D    Y         +D  + 
Sbjct: 194 NEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGFPDESDANWH 253

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
               +      ++V+G D    + R  AV        A I +        +      KMS
Sbjct: 254 YWPAD------VHVIGKD----IIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKGEKMS 303

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +   ++ D+ G D VR+  L  
Sbjct: 304 KSVGNIVDPFNLADQYGVDQVRYFFLRE 331


>gi|322517312|ref|ZP_08070187.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124009|gb|EFX95562.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 667

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 107/338 (31%), Gaps = 51/338 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       Y+V     +++ G +I   A       Q+ +  
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAGITPQEYVDG 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----------DY 236
               + +           +++          +       E+  + + +          ++
Sbjct: 74  MAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
             ++ +  +  D +   I            +SE+ +     +    + D         + 
Sbjct: 134 FTESQLAEVYRDEQGNVIGGVAPSGHEVELVSEESYFFKLSNYADHLTDFFKEHPEFIQP 193

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  D      +  D    Y  A L Y + 
Sbjct: 194 DGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYITA-LGYGQD 252

Query: 344 KYERGFD---------NMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           ++   FD          +I+++G D    HS Y      +  A+        V     V 
Sbjct: 253 EHG-NFDLFWQNDENHEIIHMIGKDILRFHSIY---WPIILMALDLPLPTRLVAHGWFVM 308

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             +DG   KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 309 --KDG---KMSKSKGNVIYPEMLVERFGLDPLRYYLMR 341


>gi|307128538|ref|YP_003880568.1| glutamyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483000|gb|ADM89870.1| glutamyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 490

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 85/230 (36%), Gaps = 36/230 (15%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYIND 169
            K+ + F + +PTGP+H+G  R A+     A       ++     + +R     E YI  
Sbjct: 2   KKIRVRF-APSPTGPLHIGSIRTALYNYLFAKKNNGKFILRIEDTDQSRLMFGAENYI-- 58

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
                     S+ W     +  ++    +G Y G Y +    ++  KY   LLN     +
Sbjct: 59  --------IESLKWC---GINPDEGPTIKGDY-GPYRQSERNKIYKKYIKYLLNNNFAYY 106

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                 +  +  ++ +R+D K         + +             + ++ +  +G  Y 
Sbjct: 107 -----AFDKKKKLEKLRNDYKKNGYYFLYNYSNRKKLDNSLNLSNEETLEKIN-KGIPYV 160

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
                PK    +  D+ R ++      +    D+ L KSD + TY  A++
Sbjct: 161 IRYKIPKYSNIEIKDLIRGKIYINYKSLD---DKILFKSDETPTYHLANV 207


>gi|291532038|emb|CBK97623.1| glutamyl-tRNA synthetase, bacterial family [Eubacterium siraeum
           70/3]
          Length = 549

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 29/321 (9%)

Query: 93  LSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +  +YL ++L   +      +           K  +   + +PTG MH+G    A++   
Sbjct: 1   MDNNYLAELLFGDIKTTPEDMFAKYPARTLPDKAAVTRFAPSPTGFMHIGGLYAALISMC 60

Query: 150 LASL------MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           +A        +     +  RE  I     +I   +L+ +          D +  +G Y G
Sbjct: 61  MARQSDGVFYLRLEDTDKKRE--IEHGADEI-ITSLAQYGVCFDEGAAADGEAEKGSY-G 116

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y + + KE+   ++ +L+      +        +  + K    +   +      + S  
Sbjct: 117 PYRQSMRKEIYQTFAKDLVKRGL-AYPCFCSAEELDEIRKAQEAEKADMG----YYGSYA 171

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                    I   I       YV                D+ R  +     +    +D  
Sbjct: 172 KCRNLSIEEIEANIKAGKE--YVLRLRSDGNAENKITCRDLIRGNIEMPENI----MDVV 225

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           LLKSDG  TY     A+    +  G  ++I   G +        E +  A   K  +   
Sbjct: 226 LLKSDGIPTYHF---AHVVDDFLMGTTHVIR--GDEWISSYPLHEQLFRASGLKMPKYAH 280

Query: 384 LLCELVRLYRDGMPIKMSKRA 404
           +   +     +    K+SKR 
Sbjct: 281 IAPIMKLDGGENKKRKLSKRK 301


>gi|225552408|ref|ZP_03773348.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371406|gb|EEH00836.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 480

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 114/335 (34%), Gaps = 43/335 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 G+ +  + +   + + ++        P++  +       +  ++KI+ +     
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLIASKHIPIMIEVVKILEEKKNTY 144

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +++     F         D+ID           +  P       K +     L F 
Sbjct: 145 FSNGNVYFDTSCFKSYGEMAGIDLIDK---------DMTLPRVDVDKFKRNKTDFVLWFT 195

Query: 313 STMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--YVKR 366
           ++   D     D P       + Y +  L       E   D + I++ G DH G  ++  
Sbjct: 196 NSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHHINE 250

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFM 425
           +      + +K   + V    L+  Y      KMSK  G+FIT++ + D+       R++
Sbjct: 251 IAIAECFLDKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDFRYL 305

Query: 426 MLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
            L       L F     +  + ++EN +  + Y Y
Sbjct: 306 CLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|163757458|ref|ZP_02164547.1| leucyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284960|gb|EDQ35242.1| leucyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 876

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +       + I    N         +E     P+G +H+GH R   +GD +A   
Sbjct: 9   KQAEIRWQRQWDEAKIYETDNDSPDPKYYVLEMF-PYPSGRIHMGHVRNYALGDVVARYK 67

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 68  RARGFNV 74


>gi|119509064|ref|ZP_01628215.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466230|gb|EAW47116.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 873

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 92  YLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P+ + +         G++       K     +      P+G +H+GH R   + D +
Sbjct: 4   RYNPADIEEKWQQTWAELGLDKTPANSHKPKFYALSMF-PYPSGSLHMGHVRNYTITDVI 62

Query: 151 ASLMAFSGYEV 161
           A L    GY+V
Sbjct: 63  ARLKRMQGYKV 73


>gi|317013358|gb|ADU83966.1| leucyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 806

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           F+N+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FVNI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D LA       Y V
Sbjct: 56  DALARYYRLHHYNV 69


>gi|325104233|ref|YP_004273887.1| valyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324973081|gb|ADY52065.1| valyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 880

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 64/227 (28%), Gaps = 33/227 (14%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           ++ +++  +     I     N TG +H+GH     + D L       G            
Sbjct: 24  KFFKSVPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARMKGKNACWVP----- 78

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G    ++A         A+        +      +LK+   E  +KY             
Sbjct: 79  GTDHASIATEAKVV---AMLKEKGINKKDLTRSEFLKY-AYEWKEKYG------------ 122

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                        II + LK L    D   +         + + D   +L ++G +Y GI
Sbjct: 123 ------------GIILEQLKKLGASCDWDRTAFTMDPELSAAVIDTFIHLHKKGLIYRGI 170

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
                         D + +          +   L++ DG  T     
Sbjct: 171 RMVNWDPKGLTAVSDEEVIRKEVNQKLYYIKYKLVERDGFVTIATTR 217


>gi|307747993|gb|ADN91263.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|298242724|ref|ZP_06966531.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555778|gb|EFH89642.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 486

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 140/421 (33%), Gaps = 70/421 (16%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +HVG+ R  ++ D L  ++ ++GY+V     I D G                
Sbjct: 35  CGPTVYKDIHVGNFRTFMMTDWLRRMLEYNGYDVYLVRNITDVG---------------- 78

Query: 188 ALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNFPEEKWL------PIVKDYSVQ 239
            L N+D +  E               ++A +Y+ + +    E  +      P   D+  +
Sbjct: 79  HLQNDDVESGEDKLEYEARTTGRSAYDIAQRYTEQYMRDAAELNILPPHLSPKATDHIGE 138

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKT 298
            +        K L    D  +  D  H  +   +  + ++NL   G+  E +      ++
Sbjct: 139 MLEMTQALVEKGLAYIADGNVYYDVAHFPEYGKLSGNTVENLRAGGHGREQMEVAEDKRS 198

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +   + +K    R    G           G   +     A         FD  I+  G 
Sbjct: 199 PEDFALWKKGDEGRQMNWGSPWG------SGFPGWHIECSAMATKYLGEQFD--IHTGGL 250

Query: 359 D-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM--------PIKMSKRAG 405
           D     H   + + +       ++  +  V    L+   R            IKMS+  G
Sbjct: 251 DLMFPHHEDEIAQSQGT---FGKEPVKYWVHGEFLIIGNRKMKASNENGDDSIKMSRSKG 307

Query: 406 DFITLRHVVDEVGSD--SVRFMMLWRKNSELLDF--DFCKVKEQSKEN------PVFYVQ 455
           + + +  + +E G D  + R++ML       +++  D  +  + +  N       +   +
Sbjct: 308 NVLLVSTLKEE-GIDPMAFRYLMLTAHYRSKINYTDDSIQAAQNALNNLRDDLAELPITE 366

Query: 456 YAYA------RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-AEYPRV 508
                     R R  FR+A +   DL   L       + ++ + +E     HL  ++ RV
Sbjct: 367 QTANWSEEAQRVRDAFREAINNDLDLPTALVLTRETVRNAKIEPAER---RHLVLDFDRV 423

Query: 509 I 509
           +
Sbjct: 424 L 424


>gi|262277237|ref|ZP_06055030.1| valyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224340|gb|EEY74799.1| valyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 880

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 33/185 (17%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +      +     V +  LV   RD    KMSK  G+
Sbjct: 487 TGFD-IIFFW-------VARMMMMGLHFMNEVPFEKVYVHALV---RDEKGQKMSKSKGN 535

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            I    +++E G+D++RF ++   +    +     +VK         +  + Y    ++F
Sbjct: 536 VIDPLTIIEEFGADALRFTLISMSSPGRDVKLSIDRVKGYRNFLTKIWNTFNYCTMNNVF 595

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL-IVHLA---EYPRVIENATIAQEPYKL 521
                           +N   Q   F  +E ++ I  L     +      A         
Sbjct: 596 ------NIKKSKIKNIKNPANQWILFTLNENKIKIKKLIENFRFDE----AAKEL----- 640

Query: 522 AFYLY 526
             YLY
Sbjct: 641 --YLY 643


>gi|258649099|ref|ZP_05736568.1| isoleucine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850745|gb|EEX70614.1| isoleucine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 1137

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 29/171 (16%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +         ++   + L ++G   KMSKR G+ +     + 
Sbjct: 648 GVDQTRGWFFTLHAIATMI-FDSVSFKNVISNGLVLDKNG--NKMSKRLGNAVDPFETIA 704

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK-------ENPVFYVQYAYARCRSIFRQ 467
           + GSD +R+ M+   +  + L FD   +KE S+       +   F+  YA          
Sbjct: 705 KYGSDPLRWYMITNASPWDNLKFDEEGIKEVSRTFFGKLYQTYSFFAMYANV-------- 756

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                 D        +  P+   +  SEL  +V        +  A    EP
Sbjct: 757 ---DDFDAHAPQVDFSKRPEIDRWILSELNTMV------AEVTAALDDYEP 798


>gi|190572724|ref|YP_001970569.1| valyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|254783559|sp|B2FMS2|SYV_STRMK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|190010646|emb|CAQ44255.1| putative valyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 942

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 54/214 (25%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      L         +  +  G+   + +     N TG +H+GH     + D L   
Sbjct: 9   DPKSFETDLYEAWEKAGHFKPSGTGEPYTILL--PPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  Q+    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIGKVWEWKQQSG-DTIERQMRRLGTSADWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|37522488|ref|NP_925865.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708049|sp|Q7NCQ9|SYV_GLOVI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|35213489|dbj|BAC90860.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 897

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 21/180 (11%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              GFD +I+   +           +A    E   QI      +  L RD    KMSK  
Sbjct: 489 MSTGFD-IIFFWVAR----------MAMMAGEFTGQIPFETVYINGLVRDEKGQKMSKTK 537

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS- 463
           G+ I    ++D+ G+D++R+ ++        D  F   ++  +   V   +    +  + 
Sbjct: 538 GNGIDPIEMMDKYGTDALRYTLVREVTGAGQDVRFDYNRKTGESGAVDASKRFANKIWNA 597

Query: 464 ---IFRQAKDIFPDLDFDLFPRNVIPQES----EFDTSELQLIVHLAEYPRVIENATIAQ 516
              +     ++ P       P ++  ++         +  Q+   L  Y   +  A  + 
Sbjct: 598 SRFVLMNLDELTPAALGAADPGSLTLEDRWILGRLGQTARQIDELLGRY--ALGEAARSL 655



 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 72/259 (27%), Gaps = 40/259 (15%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                     +     G G   ++     N TG +H+GH  C  + D +       G++ 
Sbjct: 18  WQRFWEEHRFFSPAADGPGKPFSLVLPPPNVTGSLHMGHALCFTLPDVVVRYRRMKGFKT 77

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
                                      L+   +D        V  K + +E   ++    
Sbjct: 78  ---------------------------LWLPGTDHASIAVHTVLEKQLRQEGKTRFDLGR 110

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             F E  W    K+ S       IR  L+ L +  D               +  +  +L 
Sbjct: 111 EAFLERAW--AWKERS----QDTIRGQLRRLGLSLDWTRESFTLDEKRNRAVVKVFVDLH 164

Query: 282 RQGYVYEGIL-------PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           R+G +Y G                 +  D + K  L++      D D  L+ +       
Sbjct: 165 RKGLIYRGKYLVNWCPASQTAVSDLEVDDKEEKGHLWQLRYPVADSDEFLVVATTRPETM 224

Query: 335 AADLAYFKCKYERGFDNMI 353
             D        +  + ++I
Sbjct: 225 LGDTGVAVHPEDPRYKHLI 243


>gi|157415352|ref|YP_001482608.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047144|sp|A8FME4|SYL_CAMJ8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157386316|gb|ABV52631.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315932229|gb|EFV11172.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|315500119|ref|YP_004088922.1| valyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418131|gb|ADU14771.1| valyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 938

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 35/223 (15%)

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQ----GYVYEGILPPPKSKTTQK 301
           DD+     Q  +  +E++            I+ +LA+Q    G  ++        +   +
Sbjct: 444 DDMSTWYSQIFVAETEEELLEQAKGYYGSEIEVSLAKQPDKAGLAWKDGTNNILERVELR 503

Query: 302 CDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            D D     F S      TM   +  R L +   ++T               GFD +I+ 
Sbjct: 504 QDEDVLDTWFSSALWPFSTMGWPEQTRDLERFYPTHTLVT------------GFD-IIFF 550

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
                   V R+  +    + K     V +  LV   RD    KMSK  G+ +    ++D
Sbjct: 551 W-------VARMMMMGLHFTGKAPFQRVFINALV---RDEKGQKMSKSKGNVMDPLVLID 600

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           E G+D++RF  L   + +  D    K + +   N    +  A+
Sbjct: 601 EFGADALRFT-LSAMSGQGRDIKLAKQRIEGYRNFGTKLWNAH 642


>gi|209694117|ref|YP_002262045.1| valyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008068|emb|CAQ78209.1| valyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 953

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRETFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 152 ATQEVFVRLFEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|104774389|ref|YP_619369.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|123251849|sp|Q1G971|SYL_LACDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|103423470|emb|CAI98369.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 804

 Score = 43.0 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 44/205 (21%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  YF   +     K     + +       +Y+ G++H+     Y +    V   +   
Sbjct: 493 GSSWYFLRYIDPHNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVV 552

Query: 378 KAQINVLLCELVRLYRDGM----PIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNS 432
             +         +LY  G+      KMSK  G+ +    VVDE G+DS+R + M     +
Sbjct: 553 PTK-----EPFQKLYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLN 607

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             +D+D         +N             S  ++  D       +    + IP E   D
Sbjct: 608 ASIDWD---------DNGP-----------SGVKKFLDRVWRTFVNDLDLDPIPSEKITD 647

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
            ++ +L      Y   ++  T   E
Sbjct: 648 KNDGKLDKI---YNETVKTVTEHFE 669


>gi|319941120|ref|ZP_08015456.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805477|gb|EFW02279.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 468

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 77/449 (17%), Positives = 125/449 (27%), Gaps = 118/449 (26%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E GR  +        ++         H+GH R  V  D +   +  SGY+VT    I D 
Sbjct: 19  EPGRVRMYVCGVTVYDYC--------HIGHGRTFVAFDVVRRWLEASGYKVTFVRNITDV 70

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
             +I   A                        GV    +  E A     ++L        
Sbjct: 71  DDKIIRRAAE---------------------RGVTTDELTDEFARAMQEDMLALG--CLA 107

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           P  +  + Q +                               + ++I  L  +G+ Y   
Sbjct: 108 PTFEPRATQYI-----------------------------PQMLNLIGKLEEKGFAYHAA 138

Query: 291 LPPP-----------KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD----------- 328
                          +       D+     +       D +D  L KS            
Sbjct: 139 DGDVDYAVRKFPNYGRLSGKSIDDLQSGARVQEREGKHDPLDFVLWKSAKPGEPQWDSKW 198

Query: 329 --GSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQI 381
             G   +     A          D  I+  G D     H   + + EA   A   + A+ 
Sbjct: 199 GCGRPGWHIECSAMAMDLLGETID--IHGGGPDLVFPHHENEIAQSEA---ATGHQFART 253

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSE 433
            +    L     DG   KMSK  G+F T+R  + E         G++ +RF +L  +   
Sbjct: 254 WMHSGPLRVRSADGKEEKMSKSLGNFWTIRDALKETNAAYGEGCGAEVLRFFLLRSQYRS 313

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--------DLDFDLFPRNVI 485
            + F    ++E  K        Y   + R+  R A D            +D D      +
Sbjct: 314 PITFSSVLIEEAHK---ALVRLYTALKGRAADRAALDWNEPFAARFKAAMDDDFNTALAV 370

Query: 486 PQESEFDTS-----ELQLIVHLAEYPRVI 509
               E  T         L+  L    R++
Sbjct: 371 SVLFELATEINRTGSPALVRQLLGLGRIL 399


>gi|300871449|ref|YP_003786322.1| valyl tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689150|gb|ADK31821.1| valyl tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 892

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 57/198 (28%), Gaps = 33/198 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   L +   +   +   +       +I     N TG +H+GH     + D L   
Sbjct: 18  TPKNIEDKLYNFWKTSGFFHAVMDKNKEPYSIVIPPPNVTGVLHMGHGLNNTLQDILIRF 77

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
                                  L     W            +P   + G+  ++V +  
Sbjct: 78  HR--------------------MLGKCTLW------------MPGTDHAGIATQNVVERR 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++    + + +    II   L+ +    D          G  + +
Sbjct: 106 LKAEGKNKHDLGREAFVKKTWEVANEHH-SIIVKQLEKIGCSCDWERERFTLDEGLSNAV 164

Query: 274 RDIIDNLARQGYVYEGIL 291
           R++   L  QG +Y G  
Sbjct: 165 REVFVELYNQGLIYRGKY 182


>gi|253991460|ref|YP_003042816.1| valyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782910|emb|CAQ86075.1| valyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 965

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L S       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 18  TYNPKEIEQPLYSHWEKSGYFKPNGDTSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQSGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++    I + ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWQWKAESG-GTITNQMRRLGNSVDWERERFTMDEGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G               D +
Sbjct: 166 AVKEAFVRLYQENLIYRGKRLVNWDPKLHTAISDLE 201


>gi|88606836|ref|YP_505282.1| hypothetical protein APH_0701 [Anaplasma phagocytophilum HZ]
 gi|88597899|gb|ABD43369.1| hypothetical protein APH_0701 [Anaplasma phagocytophilum HZ]
          Length = 40

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 510 ENATIAQEPYKLAFYLYDLASVF--HGHWS 537
           + +    EP+ +AFYL ++A  F  H  + 
Sbjct: 6   QTSFENYEPHTIAFYLIEVAEAFRSHSVYD 35


>gi|85712277|ref|ZP_01043328.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693904|gb|EAQ31851.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 944

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 14/137 (10%)

Query: 296 SKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-----R 347
            +  Q  + D  Q  F    +T++GD+ D+    +D    +F + + +     E      
Sbjct: 502 EQVAQLIEKDGVQAWFDLDPATLLGDEADKYRKVTDTLDVWFDSGVTHHCVLREFPGLSW 561

Query: 348 GFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             D  +Y+ GSD   G+ +       A+ E+     VL         D    KMSK  G+
Sbjct: 562 PAD--LYLEGSDQHRGWFQSSLVTGVAMYEQAPYRQVLTHGF---TVDAQGRKMSKSIGN 616

Query: 407 FITLRHVVDEVGSDSVR 423
            +  + V++++G D +R
Sbjct: 617 VVAPQDVMNKLGGDILR 633


>gi|119383635|ref|YP_914691.1| glutamyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|229470568|sp|A1B0F1|SYE1_PARDP RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|119373402|gb|ABL68995.1| glutamate--tRNA(Gln) ligase [Paracoccus denitrificans PD1222]
          Length = 441

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 90/288 (31%), Gaps = 41/288 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG+ R A++   +A     +G            G  I  L  +   R +Q 
Sbjct: 7   APSPTGHIHVGNLRTALMNYLIAR---KAG------------GTFILRLDDTDRERSKQE 51

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             +      E             +  D+Y+           L  V +   +  +K  +  
Sbjct: 52  YADGIQRDLEWLGLTWDRIERQSDRLDRYAEAAEGLRAAGRLYEVFETPTELDLKRKKQ- 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-YEGILPPPKSKTTQKCDMDRK 307
              LN+          + R       +  D L  +G   Y   L        ++ +    
Sbjct: 111 ---LNMGKPPV-----YDRAGLKLSAEDKDRLRAEGRAGYWRFLLDQ-----ERIEWADG 157

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   S       D  L+++DG   Y     A      E G  ++  V G+DH       
Sbjct: 158 ILGDISIDAASVSDPVLIRADGQVLYTF---ASSVDDAEMGVTHI--VRGADHVTNTATQ 212

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
             +  A+  +             L       ++SKR G   ++R + +
Sbjct: 213 IQIIRALGSEPPAFAHH-----SLLTGAQGEELSKRLGTL-SIRDLRE 254


>gi|297568453|ref|YP_003689797.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924368|gb|ADH85178.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 829

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
               + + +      ++G  +     G   K  +  +   P+G +H+GH R   +GD +A
Sbjct: 7   RYDFAVIEEKWRDRWLAGKTWQVEADGSRKKYYVLEMFPYPSGRIHMGHVRNYTIGDVVA 66

Query: 152 SLMAFSGYEVT 162
                 G  V 
Sbjct: 67  RYRRMCGDNVI 77


>gi|269955925|ref|YP_003325714.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304606|gb|ACZ30156.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 916

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 36/196 (18%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++ GSD+VR+     +      +D  ++K          
Sbjct: 610 DPDRKKMSKSKGNVVTPLGLLEQHGSDAVRYWAASARLGTDAAYDEGQMK--IGRRLAIK 667

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           V  A    + +    +D    +   +   +++  E +           LA    V++ AT
Sbjct: 668 VLNA---SKFVLEFGRDQQTGVGEIVLDPSLVTVELDR--------AMLAGLAAVVDTAT 716

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRL---RFVQANNRK-----LTMMRLQ 561
            A E      Y      ++   F   W+   +   L   R     +        T  R  
Sbjct: 717 EALE-----AYDHTRALEVTETF--FWTFCDDYLELVKDRAYGDADAAQVTAGTTSARTA 769

Query: 562 LVHAVASIINSGLNII 577
           L  A    +++ L ++
Sbjct: 770 LALA----LDTMLRLL 781


>gi|320450390|ref|YP_004202486.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150559|gb|ADW21937.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 481

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 116/385 (30%), Gaps = 63/385 (16%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R  +V D L   +   GY V     I D G                
Sbjct: 29  CGPTVYSDPHLGHARGPIVYDVLRRYLLHLGYRVRFVSNITDVGH--------------- 73

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                   L +    G          A     E +   E+         +   +++    
Sbjct: 74  --------LTDDADQGEDKIE---RRAKLERLEPMEVAEKYTWSYFDAITALNVLRPSIA 122

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---KSKTTQKCDM 304
              + +I   I ++E     G             R+G VY  +   P   K    +  ++
Sbjct: 123 PRASGHIPEQIELTERLLKLGFAY---------ERKGSVYFRVRAFPEYGKLSGKRLEEL 173

Query: 305 DRKQLLFRSTMVGDDVDRPLLKS--------------DGSYTYFAADLAYFKCKYERGFD 350
                +       D +D  L K+              +G   +     A        GFD
Sbjct: 174 RAGARVEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGFD 233

Query: 351 NMIYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I+  G D    + +   A A A   + A+  +    ++         KM+K  G+ + 
Sbjct: 234 --IHAGGIDLQFPHHECEIAQAEAAGYRFARHWMHHNHVL-----LEGEKMAKSTGNLVL 286

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           L  ++      ++RF +L       +DF +  + E +K      +Q AY   R+    A 
Sbjct: 287 LHDLLKAHEPMALRFYLLQTHYRSPMDFTWEGL-EAAKRGYARLLQ-AYREVRTRLNAAH 344

Query: 470 -DIFPDLDFDLFPRNVIPQESEFDT 493
             I P+L+  L        E+  D 
Sbjct: 345 PGITPELERALDALEKDFLEAIEDD 369


>gi|260592797|ref|ZP_05858255.1| glutamate--tRNA ligase [Prevotella veroralis F0319]
 gi|260535328|gb|EEX17945.1| glutamate--tRNA ligase [Prevotella veroralis F0319]
          Length = 505

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 100/279 (35%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGKLIFRIEDTDSNRFVPGAEEYILDSFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY ++LL   +  ++       + A  K I+  
Sbjct: 68  GIEFDEGVSFGGEHGPYRQSERREIYKKYVNQLLEAGK-AYIAFDTPEELDAKRKEIQ-- 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               N Q+D         R   +  ++ +D+L   G  Y         +     DM R  
Sbjct: 125 ----NFQYDAHTRLQ--MRNSLTMSKEEVDSLIDDGQQYVVRFKIEPGEEIHVNDMIRGD 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +  +S ++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VCIKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   + +        L+ L  +G   K+SKR GD
Sbjct: 231 VLLYRAFGWEDSMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|251772855|gb|EES53414.1| Leucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 837

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                    R    K     +E     P+G +H+GH R   +GD +A      GY V
Sbjct: 19  WKSDKAFSTRADRTKPKYYCLEMF-PYPSGRIHMGHVRNYSIGDAIARYKRMRGYNV 74


>gi|187776915|ref|ZP_02993388.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC
           15579]
 gi|187775574|gb|EDU39376.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC
           15579]
          Length = 881

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 55/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +    T   I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDENKTPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGFSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLEKVWEW-TDEYRGKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|86152674|ref|ZP_01070879.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613441|ref|YP_001000769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166231595|sp|A1W078|SYL_CAMJJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85843559|gb|EAQ60769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249151|gb|EAQ72112.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|86150411|ref|ZP_01068637.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596594|ref|ZP_01099831.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562705|ref|YP_002344484.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|14285781|sp|Q9PNK3|SYL_CAMJE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85839236|gb|EAQ56499.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191435|gb|EAQ95407.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360411|emb|CAL35208.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926320|gb|ADC28672.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929925|gb|EFV09083.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDALARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|317012930|gb|ADU83538.1| valyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 872

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 103/321 (32%), Gaps = 42/321 (13%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  K  +  +     N TG +H+GH     + D LA      GY+   +  ++ 
Sbjct: 29  IDGNEKIQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDH 88

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D           ++K V  E  +K    +L   +   
Sbjct: 89  AG--IATQNVVEKQLLSQGIKKEDLG------REEFIKKV-WEWKEKSGGAILEQMKRLG 139

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 140 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDGALSDIEVEYEERK 199

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLA 339
           G +Y         K        R + LF  + +     D+  + L+            + 
Sbjct: 200 GALYYIRYYLENQKDFLVVATTRPETLFGDSALMVNPNDERYKHLVGQKAILPLIHRAIP 259

Query: 340 YFKC------------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                           K   G D   Y +G  H     ++        ++K  +N    E
Sbjct: 260 IIADEHVEMEFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGE 312

Query: 388 LVRL----YRDGMPIKMSKRA 404
              L     RD +  ++ + A
Sbjct: 313 FENLERLEARDKVVERLKENA 333


>gi|306844011|ref|ZP_07476606.1| glutamyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275766|gb|EFM57490.1| glutamyl-tRNA synthetase [Brucella sp. BO1]
          Length = 473

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTVIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|308070997|ref|YP_003872602.1| Cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 467

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 57/373 (15%), Positives = 104/373 (27%), Gaps = 88/373 (23%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V D + S + + GY+V    Y+                            
Sbjct: 37  IHIGNARPVIVFDVVRSYLEYLGYDV---NYV---------------------------- 65

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI- 254
                   V    V  +L  K     ++               +  +    +DL  LN+ 
Sbjct: 66  --------VNFTDVDDKLIRKARELDMDVSAVA----------EKFIAAYYEDLAGLNVP 107

Query: 255 --QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +  ++E          I D I  L  +GY YE            K           
Sbjct: 108 AASMNPRVTES------MDLIIDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLE 161

Query: 313 STMVGDDV----------DRPLLKS-------------DGSYTYFAADLAYFKCKYERGF 349
               G  +          D  L K+             DG   +     A  +       
Sbjct: 162 ELQFGIRINVDERKENAEDFVLWKAAKPGEIHWSSPWGDGRPGWHIECSAMARHYLGDTL 221

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D    + G          E   A       +       +   Y      KMSK  G+ I 
Sbjct: 222 D----IHGGGQDLQFPHHECECAQSEVITGKPLSRYW-MHNGYIRIDNEKMSKSLGNGIL 276

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           ++ +      +++R+ ML       L+++   + +   EN V  +  A A  +     A 
Sbjct: 277 VKDLRAHHKPEALRYFMLSTHYRNPLNYNQETMSQA--ENSVERIANAVANVKHRLANAL 334

Query: 470 DIFPDLDFDLFPR 482
           +   ++  +L  +
Sbjct: 335 EGNGEVSTELQTK 347


>gi|322435729|ref|YP_004217941.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163456|gb|ADW69161.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 855

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P +  +  +   +   +      GK     +E +   P+G +H+GH R   +GD LA 
Sbjct: 34  IEPKWQARWDADPSLYAADAH--DSGKPKYYCLEML-PYPSGALHIGHVRNYAIGDALAR 90

Query: 153 LMAFSGYEV 161
            M   G+ V
Sbjct: 91  FMWMRGHNV 99


>gi|289765479|ref|ZP_06524857.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717034|gb|EFD81046.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 859

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQEKWSKDNIFKTENEVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|254693855|ref|ZP_05155683.1| glutamyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261214141|ref|ZP_05928422.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 3 str. Tulya]
 gi|260915748|gb|EEX82609.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 3 str. Tulya]
          Length = 473

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 50/302 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFDRAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VR 423
            R
Sbjct: 253 YR 254


>gi|254293695|ref|YP_003059718.1| valyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042226|gb|ACT59021.1| valyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 1032

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 70/239 (29%), Gaps = 34/239 (14%)

Query: 100 KILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           KI  S   SG    +          +I     N TG +H+GH     + D L       G
Sbjct: 14  KIYDSWEKSGAFKPKMETEGAADAYSIVIPPPNVTGVLHMGHALNNTLQDLLCRYQRMQG 73

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            +V  +   + AG     +                               V ++LA + +
Sbjct: 74  KDVLWQPGTDHAGIATQMV-------------------------------VERQLAAEGN 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   +K++  V ++  ++  +II   LK L    D          G    +  +  
Sbjct: 103 QSAASLGRDKFIERVWEWKEKSGGQIINQ-LKRLGASCDWSRERFTLDEGLSKAVTKVFV 161

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            L +Q  +Y            Q    D +               PL   + +YTY   D
Sbjct: 162 ELHQQKLIYRDKRLVNWDPHFQSAISDLEVDNVEVDGHMWHFKYPLQGGE-TYTYVEKD 219


>gi|237743871|ref|ZP_04574352.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432902|gb|EEO43114.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 859

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQEKWSKDNIFKTENEVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|74317875|ref|YP_315615.1| isoleucyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|84029576|sp|Q3SHS3|SYI_THIDA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|74057370|gb|AAZ97810.1| isoleucyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 929

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 18/197 (9%)

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K + E      +Y+ GSD   G+ +       A   +     +L    V    DG   KM
Sbjct: 554 KRRSELAHPADLYLEGSDQHRGWFQSSLLTGCATDGRAPYDALLTHGFVV---DGKGHKM 610

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ I  + V+D+ G+D +R  +     S  L      +K   +          Y R
Sbjct: 611 SKSKGNVIAPQKVMDQYGADILRLWVATTDYSGELSISDEILKRVVEG---------YRR 661

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+  +       D D      +V  +  E D   L +   L      ++    A E + 
Sbjct: 662 IRNTLKFLLANLSDFDPREHAMSV-DEWLEIDRYALAMTRRLQG---ELQRHYDAYEFHF 717

Query: 521 LAFYLYDLAS-VFHGHW 536
           +   L    S    G +
Sbjct: 718 IVQKLQSFCSEDLGGFY 734


>gi|332638051|ref|ZP_08416914.1| glutamyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 498

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 101/306 (33%), Gaps = 37/306 (12%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQ 173
            K+ + + + +PTG +HVG+ R A+     A      G  V R           +   +Q
Sbjct: 7   KKIRVRY-APSPTGHLHVGNARTALFNWLFARHYK--GEFVIRIEDTDQARNIADGEKSQ 63

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
           ++ LA          L  ++S    G Y G Y +    ++      ELL+          
Sbjct: 64  LDNLAWL-------GLDWDESPANPGEY-GPYRQSERMDIYKPLIQELLDRGL-----AY 110

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           K Y     ++  R+  +    Q   ++ E  +       I         +G         
Sbjct: 111 KSYKTSEELEAERE-AQIAAKQAPHYVYE--YAGMSDDEIAAAQAEAEAKGLQPVVRFRV 167

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+ K     D+ +  +   S  +G   D  + K+DG  TY   + A     +     +++
Sbjct: 168 PEDKPYAWDDIVKGHVEINSNTIG--GDWVIQKADGMPTY---NFAVVVDDHMMEISHVL 222

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              G DH     +   +  A   +      +   +  +       K+SKR    +     
Sbjct: 223 R--GDDHVSNTPKQLMIYEAFGWEAP----IFGHMTLIINAETGKKLSKRDESILQFIEQ 276

Query: 414 VDEVGS 419
             E+G 
Sbjct: 277 YRELGY 282


>gi|332664697|ref|YP_004447485.1| glutamyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333511|gb|AEE50612.1| glutamyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 506

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 101/286 (35%), Gaps = 40/286 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       ++     + TR  Y+   GA+   +  S+ 
Sbjct: 9   APSPTGALHIGGIRTALYNYLLAKKFGGTFILRIEDTDQTR--YV--PGAE-AYIIESLR 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQ 239
           W     +         G Y     K +  E A +          F   + L  V+    +
Sbjct: 64  WAGIVPMEGPGFGGAYGPYRQSDRKEIYLEYAQQLVDNGHGYYAFDTPEELDAVR----K 119

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A      D    L +++ + +S ++  R            L  +   Y   L  P+ ++ 
Sbjct: 120 ADENFKYDSKTRLKLKNSLTLSAEEVKR-----------RLNAEEP-YVIRLKVPEDQSI 167

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R ++ F+S  +    D+ +LK DG  TY    LA           ++I   G +
Sbjct: 168 LIQDLVRDEVSFQSNELD---DKVMLKGDGMPTYH---LANVIDDRLMKITHVIR--GEE 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                     +  A   +          L+ L  DG   K+SKR G
Sbjct: 220 WLPSTAHHVLLYRAFGWETEMPRFAHLPLI-LKPDGKG-KLSKRDG 263


>gi|312196111|ref|YP_004016172.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Frankia sp.
           EuI1c]
 gi|311227447|gb|ADP80302.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Frankia sp.
           EuI1c]
          Length = 881

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           D    KMSK  G+ +T   +++E GSD+VR+     +      FD  ++K
Sbjct: 576 DPDRKKMSKSKGNVVTPMGLLEEHGSDAVRYWAASGRPGTDTAFDVGQMK 625


>gi|303314787|ref|XP_003067402.1| glutamyl-tRNA synthetase family protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240107070|gb|EER25257.1| glutamyl-tRNA synthetase family protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 601

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 103/293 (35%), Gaps = 46/293 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+    LA      G  + R   I D   Q  T+  +    Y+  
Sbjct: 48  APSPTGYLHLGSLRTALFNYLLAK--RTGGQFLLR---IEDT-DQKRTIPGAEQRLYEDL 101

Query: 188 ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
               L  ++  +  G Y G Y +     L    +  L++       F   + L  +  + 
Sbjct: 102 QWAGLQWDEGPVVGGPY-GPYRQSERTALYKSQAENLISTGHAYRCFCSSERLDRLARHR 160

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFH--RGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               +    D         DI   E +     G+   +R  +   A    ++E I+    
Sbjct: 161 HDLGLAPGYD-----GACIDISKEESEERAANGEAHVVRLRV---AESYPMFEDIVYGKT 212

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +   +    + +L+         VD  LLKSDG  TY  A++       +  F  + +V
Sbjct: 213 GQNRARNGGKKAELV------DTFVDPILLKSDGYPTYHLANV------VDDHFMKITHV 260

Query: 356 M-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           + G++         A+  A   +  +        V L  +    K+SKR  D 
Sbjct: 261 IRGTEWMSSTPMHVALYNAFQWQPPKFGH-----VPLLVEKNGQKLSKRNADI 308


>gi|268680239|ref|YP_003304670.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618270|gb|ACZ12635.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 815

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   +          K  K  +      P+G +H+GH R   +GD +A     +G+
Sbjct: 11  KWQKTWDETQAFEPSTDFSKAKKYILSMF-PYPSGRIHMGHVRNYTIGDAIARHHRKNGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|167948225|ref|ZP_02535299.1| leucyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 168

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+ +   + S       +  +      K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   DPAAIEAAVQSHWERKKSFTVSEDPAKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRMQGKNV 73


>gi|145350050|ref|XP_001419436.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579667|gb|ABO97729.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 924

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 75/265 (28%), Gaps = 43/265 (16%)

Query: 99  RKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            + L     S G     +    G    I     N TG +H+GH     + D +       
Sbjct: 21  EENLYEWWESRGYFAPNDETATGPPFVIPMPPPNVTGALHMGHAMFVTLQDVMTR----- 75

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
                                 S   R ++ L+   +D        V  + +  E   + 
Sbjct: 76  ----------------------SARMRGRKTLWLPGTDHAGIATQLVVERKLESEGVKR- 112

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                +   ++++  V ++  +   + I+  +K L    D          G    + +  
Sbjct: 113 ----TDMTRDEFVERVWEWKAEYGGR-IQQQIKRLGASCDWSRERFTLDEGLSESVLEAF 167

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQ---------LLFRSTMVGDDVDRPLLKSD 328
             L  +G +Y+G      +   Q    D +            F+  + G   D  L  + 
Sbjct: 168 ITLHDRGLIYKGTYMVNWAPKLQTAVSDLEVEYTEEPGTLYFFKYPVEGGGADDYLPVAT 227

Query: 329 GSYTYFAADLAYFKCKYERGFDNMI 353
                   D A      +  F +MI
Sbjct: 228 TRPETILGDTAVAVNPEDDRFKHMI 252



 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 19/143 (13%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  ++  ++ K     V L  LV   RD    KMSK  G+ +    V+ E G D++
Sbjct: 511 WVARMIMMSYGMTGKLPFHTVFLHGLV---RDSQGRKMSKSLGNVVDPLGVIAEQGCDAL 567

Query: 423 RFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           RF +       + L+ +  ++           N   +V Y+           +D+  D  
Sbjct: 568 RFTLATGTTPGQDLNLNLERLASNRNFTNKIWNAGKFVLYS----------MEDMTDDER 617

Query: 477 FDLFPRNVIPQESEFDTSELQLI 499
             L          E   +EL L 
Sbjct: 618 MALVDEGAALCADEASIAELPLA 640


>gi|89093564|ref|ZP_01166512.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082254|gb|EAR61478.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 938

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 102/323 (31%), Gaps = 74/323 (22%)

Query: 228 KWLPIVKDYSVQAMMK------IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W P      ++AM++      + R     + I   I       H   P  I  +     
Sbjct: 445 EWFPGWGQNRIEAMVEQSPDWCVSRQRTWGVPIALFIHKETQQLHPNTPELIEKV----- 499

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GSYTY 333
                    L   K       D+D K+LL      GD+ D+    +D        G   Y
Sbjct: 500 --------ALEVEKVGMDAWFDLDAKELL------GDEADQYEKVTDTLDVWFDSGVTHY 545

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              D    +   E   D  +Y+ GSD   G+ +       A+        VL        
Sbjct: 546 SVID---QRDNLEFPAD--MYLEGSDQHRGWFQSSLKTGIAIKGCAPYKQVLTHGF---T 597

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            DG   KMSK  G+ +  + V+++ G+D +R  +     S  +      +K  +      
Sbjct: 598 VDGQGRKMSKSVGNVVAPQEVMNKYGADILRLWVASTDYSGEMTCSDDILKRAAD----- 652

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY R R+  R         D         P +      E   +V L  +   ++ A
Sbjct: 653 ----AYRRIRNTARFFLANLSGFD---------PAQHMVKPEE---MVALDAW--AVDRA 694

Query: 513 TIAQEPYKLAFYLYDLASVFHGH 535
              QE         +L   ++ +
Sbjct: 695 ARLQE---------ELVEHYNQY 708


>gi|94311817|ref|YP_585027.1| isoleucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987847|sp|Q1LJB8|SYI_RALME RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|93355669|gb|ABF09758.1| isoleucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 959

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 61/171 (35%), Gaps = 17/171 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       A+ +  K     +L         DG   KMSK  G+ ++ +
Sbjct: 589 LYLEGSDQHRGWFHSSLLTASMLYGKPPYKALLTHGF---TVDGEGRKMSKSVGNTVSPQ 645

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + +++G++ +R  +     S  L      +K   +          Y R R+  R     
Sbjct: 646 DISNKMGAEIIRLWVASTDYSGELSISDEILKRVVEG---------YRRIRNTLRFLLAN 696

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
             D D          +  E D   + L   L +   V+ +   A E + + 
Sbjct: 697 LTDYDHAKHALPA-SEWLEIDRYAVALTDRLQK--EVLSH-YQAYEFHPVV 743


>gi|255261291|ref|ZP_05340633.1| glutamyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255103626|gb|EET46300.1| glutamyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 468

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 15/136 (11%)

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
           Y   L  P+  TT   D  +  + +++ ++    D  LL+SDG+  Y    LA     Y+
Sbjct: 142 YVIRLRAPREGTTVIRDQVQGDVTWKNELLD---DMILLRSDGTPVYM---LAVVVDDYD 195

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G  ++I   G DH     R   +  A+          +   + L       K+SKR G 
Sbjct: 196 MGVTHVIR--GDDHLANAARQMLIYQAMGWDLP-----IYAHIPLIFGPDGKKLSKRHGA 248

Query: 407 FITLRHVVDEVGSDSV 422
                    E+G  + 
Sbjct: 249 TGAAE--YREMGYPAA 262


>gi|167750699|ref|ZP_02422826.1| hypothetical protein EUBSIR_01677 [Eubacterium siraeum DSM 15702]
 gi|167656378|gb|EDS00508.1| hypothetical protein EUBSIR_01677 [Eubacterium siraeum DSM 15702]
          Length = 549

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 29/321 (9%)

Query: 93  LSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +  +YL ++L   +      +           K  +   + +PTG MH+G    A++   
Sbjct: 1   MDNNYLAELLFGDIKTTPEDMFAKYPARTLPDKAAVTRFAPSPTGFMHIGGLYAALISMC 60

Query: 150 LASL------MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           +A        +     +  RE  I     +I   +L+ +          D +  +G Y G
Sbjct: 61  MARQSDGVFYLRLEDTDKKRE--IEHGADEI-ITSLAQYGVCFDEGAAADGEAEKGSY-G 116

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y + + KE+   ++ +L+      +        +  + K    +   +      + S  
Sbjct: 117 PYRQSMRKEIYQTFAKDLVKRGL-AYPCFCSAEELDEIRKAQEAEKADMG----YYGSYA 171

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                    I   I       YV                D+ R  +     +    +D  
Sbjct: 172 KCRNLSIEEIEANIKAGKE--YVLRLRSDGNAENKITCRDLIRGNIEMPENI----MDVV 225

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           LLKSDG  TY     A+    +  G  ++I   G +        E +  A   K  +   
Sbjct: 226 LLKSDGIPTYHF---AHVVDDFLMGTTHVIR--GDEWISSYPLHEQLFRASGLKMPKYAH 280

Query: 384 LLCELVRLYRDGMPIKMSKRA 404
           +   +     +    K+SKR 
Sbjct: 281 IAPIMKLDGGENKKRKLSKRK 301


>gi|296284128|ref|ZP_06862126.1| methionyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 520

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 99/336 (29%), Gaps = 59/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    V  D +A      G +V  +   ++ G ++         R  +    
Sbjct: 14  PNGKPHIGHAYETVAADVIARFQRLKGRDVRFQTGTDEHGLKM--------ARKAEEQGK 65

Query: 192 NDSDLPEG--YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
              +L +    Y    L        D++              + +   ++A   +  D  
Sbjct: 66  TPRELADEMSGYFRD-LFDRLNISYDRFIRTTEAGHHTASQALWRR--MEANGDLYLDRY 122

Query: 250 KALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +    ++ + F  E +   G+        + L+ QG   E  +         K       
Sbjct: 123 EGWYSVRDEAFYDEKELVEGEGG------EKLSPQGTPVEWTVEESWFFRLSKYQDKLLD 176

Query: 309 LLFRSTMVGDDVDR---PLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM--- 356
           L            R    +   +G       DL+  +  ++ G       D+++YV    
Sbjct: 177 LYASQPDFIQPDSRRNEVMRFVEGG----LRDLSISRTSFDWGVQVPGAEDHVMYVWVDA 232

Query: 357 -------------GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRD------- 394
                        G+D   +   L  +   +           L+   V L R        
Sbjct: 233 LTNYISGLGYPEEGADWKYWPADLHLIGKDIIRFHTVYWPAFLMSAGVDLPRQVYGHGFL 292

Query: 395 -GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                K SK  G+      + ++ G D++R+ ++  
Sbjct: 293 LNRGQKESKSLGNVTDPNVLAEQFGVDALRYFLMRE 328


>gi|195941732|ref|ZP_03087114.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi 80a]
          Length = 480

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 62/338 (18%), Positives = 114/338 (33%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYVFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   + V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++ N +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFY 340


>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [Clostridium sticklandii]
          Length = 443

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 54/394 (13%), Positives = 126/394 (31%), Gaps = 76/394 (19%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
            H+G+ R  ++ D   + M + GYEVT      D   +I         +       +  +
Sbjct: 12  FHIGNARPFMIFDAFRNYMEYRGYEVTYVQNFTDVDDKI--------IKRANEEGISPIE 63

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD------------------YS 237
           + E Y    +       +        +    E  +  ++D                   +
Sbjct: 64  VAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKGFAYELNGDVYFNSQA 123

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +   K+ + +L+ LN+   I     D +     PI   +    ++G +       P  +
Sbjct: 124 YKEYGKLSKQNLEELNLGARI-----DVNDEKKHPIDFALWKAKKEGEIGW---QSPWGE 175

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 ++    +  +  +GD +D      D  + +   ++A  + +  + F        
Sbjct: 176 GRPGWHIE--CSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQSEARSGKQFARYWM--- 230

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
             H+GY+                             +    KMSK  G+F T+R ++ E 
Sbjct: 231 --HNGYI-----------------------------NVDNQKMSKSLGNFFTVRDILSEF 259

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQAKDIF 472
               +RF +L       ++F    + +         N    + +  +  +    +++   
Sbjct: 260 SGQVIRFFLLSAHYRNPVNFSKELILQAKAGMERLANSKERLVFTISHAKGQMNESELEL 319

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEY 505
                +   R +   + + +T+  + +I  LA +
Sbjct: 320 VSALENHRDRFIEAMDDDINTADAISIIFELARF 353


>gi|157825706|ref|YP_001493426.1| leucyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166231638|sp|A8GNE3|SYL_RICAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157799664|gb|ABV74918.1| leucyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 870

 Score = 43.0 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +    I      +  +      K  +  +   P+G +H+GH R   +GD +A  M   
Sbjct: 4   IEQKWQQIWHDEKAFEVSNESSKPKYYVLAMLPYPSGKIHLGHVRNYSIGDVIARFMTMQ 63

Query: 158 GYEV 161
           G+ V
Sbjct: 64  GFNV 67


>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 465

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 115/369 (31%), Gaps = 48/369 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DTL     + GYEV       D   ++                    +
Sbjct: 35  IHIGNARPLIVFDTLRRYFEYKGYEVIYIQNFTDVEDKM--------INRANKEGITVFE 86

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           L E +    Y K   +    + +       E +         +  + ++I     A  + 
Sbjct: 87  LAERFIQ-EYYKDADRLNVKRATKNPRATEEIED-------MIALIQRLIDKGY-AYVVD 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++     F        ++I + +A       G    P  K     D     L      
Sbjct: 138 GDVYFRTRKFAEYGKLSHKNIEELMA-------GARVDPNEKKEDPLDF---ALWKAKKE 187

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                  P  +    +    + +A    KY       I +            E   A   
Sbjct: 188 GEPAWSSPWGEGRPGWHIECSVMA---MKY---LGQTIDIHAGGQDLIFPHHENEIAQSE 241

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               +       L   Y +    KMSK  G+F T+R ++++   +++R  ML     + L
Sbjct: 242 AATGKPFARFW-LHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300

Query: 436 DFDFCKVKEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +F    +++            EN  F +Q A +       +  D+      DL  + +  
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSS-----ENDDMLKAAIEDLKAKFIDA 355

Query: 487 QESEFDTSE 495
            E + +T+E
Sbjct: 356 MEDDLNTAE 364


>gi|237742619|ref|ZP_04573100.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430267|gb|EEO40479.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 859

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWNKDNIFKTENEVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|170759549|ref|YP_001788482.1| valyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406538|gb|ACA54949.1| valine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 881

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P    + L         +   +        I     N TG +H+GH     + D L 
Sbjct: 10  TYDPKEFEERLYKNWEEKSYFTPEVDEDKKPYTIVLPPPNITGKLHLGHALDDTLQDILM 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY               +  +++   + +  L             G+  K +G+
Sbjct: 70  RTKRMQGYSTL-------WLPGQDHASIATEVKVENELLKE----------GIVKKEIGR 112

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          E +L  V ++        IR+ +K L    D              
Sbjct: 113 ---------------EAFLGKVWEW-TDEYRGKIRNQIKKLGCSLDFTRERFTMDEQLDK 156

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++     L  +G +Y+G
Sbjct: 157 AVKHFFVKLYNEGLIYQG 174


>gi|168038171|ref|XP_001771575.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677131|gb|EDQ63605.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 586

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 58/329 (17%), Positives = 111/329 (33%), Gaps = 50/329 (15%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           KG++V + F + +PTG +HVG  R A+     A       ++     ++ R         
Sbjct: 63  KGSEVRVRF-APSPTGNLHVGGARTALFNYLYAKSLGGKFILRIEDTDLERS-------- 113

Query: 173 QINTLALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
                +     R  Q L     + P+     G Y +     +   Y  +LL         
Sbjct: 114 --TKESEEAVIRDLQWLGLEWDEGPDKEGECGPYRQSERTHIYQAYVEKLLKTG-----H 166

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           + + +     ++ +R++ K+ N+            + +       ID    +G  +    
Sbjct: 167 VYRCFCTDEELEAMREEAKSKNMPPRYMGKWGSASQAE-------IDAELEKGTPFTYRF 219

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY---FAADLAYFKCKYERG 348
             P+  +    D+ R ++ ++   +GD     +L+S+G   Y    A D A  K      
Sbjct: 220 RVPQEGSVTIHDLIRGEVSWKKDTLGDF---VVLRSNGQPVYNFCVAVDDATMK------ 270

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-DF 407
             ++I     +H     R   +  A+     Q        V L       K+SKR G   
Sbjct: 271 ISHVIR--AEEHLPNTLRQALIYNALGFSMPQFGH-----VSLILAPDRSKLSKRHGATS 323

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     +  +    V ++ L   N    D
Sbjct: 324 VGQFREMGYLAPAMVNYLALLGWNDGSED 352


>gi|157827381|ref|YP_001496445.1| glutamyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|157802685|gb|ABV79408.1| glutamyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 503

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 100/303 (33%), Gaps = 56/303 (18%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E   +   K T   I   + +PTG +H+G  R A+                    Y+   
Sbjct: 31  ELNDSKSKKMTNNVITRFAPSPTGFLHIGSARTALF------------------NYL--- 69

Query: 171 GAQINTLALSVFWRYQQALYNNDSDL-PEGYYPGVY--LKHVGKELADK--YSSELLNFP 225
                  A     ++   + + D +   E     ++  LK +G    D+  + S+  +  
Sbjct: 70  ------FAKHNNGKFLLRIEDTDKERSTEAAVEAIFSGLKWLGLNWDDEVVFQSKRNDLY 123

Query: 226 EEKWLPIVKDYSVQAM---MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +E  L ++ +          + I    +        FI    +           I  + R
Sbjct: 124 KEAALKLLAEGKAYYCFTPQEEIEKQRQEALENKQHFIFNSKWRDKTSDTYPKDIKPVIR 183

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                   L  P S +    D  +  ++  +  +    D  LL+SDG+ TY    LA   
Sbjct: 184 --------LKTPSSGSITIHDTLQGDVVIENCHID---DMVLLRSDGTATYM---LAVVV 229

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             ++ G  ++I   G DH     R  A+  A        +V +   + L       K+SK
Sbjct: 230 DDHDMGITHIIR--GDDHLTNAARQIAIYNAFGY-----HVPIMTHIPLIHGADGAKLSK 282

Query: 403 RAG 405
           R G
Sbjct: 283 RHG 285


>gi|75909191|ref|YP_323487.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702916|gb|ABA22592.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 1002

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 102/308 (33%), Gaps = 34/308 (11%)

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L        D+       F  ++W  + +D+ V      I   L     Q   + +  + 
Sbjct: 371 LADKALAFLDE--KNSPEFVPQRWTKVYRDWLVNLRDWCISRQLW-WGHQIPAWYAVSET 427

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +         ++         +E            + D D     F S +          
Sbjct: 428 NGQITDNTPFVVA--KSTNEAWEKAKAQFGENVQLEQDPDVLDTWFSSGL--------WP 477

Query: 326 KSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
            S   +     DLA  Y       GFD +I+         V R+  +A   + +     V
Sbjct: 478 FSTLGWPEQTPDLAKYYPTTTLVTGFD-IIFFW-------VARMTMMAGHFTGQMPFQTV 529

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            +  LV   RD    KMSK A + I    ++D+ G+D++R+ ++        D      +
Sbjct: 530 YIHGLV---RDENNKKMSKSANNGIDPLLLIDKYGTDALRYTLVREVAGAGQDIRLEYDR 586

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           ++ +      V+ +      ++  A+ +  +LD     +   P  +E     +     ++
Sbjct: 587 KKDES---PSVEASRNFANKLWNAARFVMMNLDGQTPGQLGQPNATELSDRWI-----IS 638

Query: 504 EYPRVIEN 511
            Y +VI+ 
Sbjct: 639 RYHQVIKQ 646


>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [Clostridium sticklandii]
          Length = 466

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 54/394 (13%), Positives = 126/394 (31%), Gaps = 76/394 (19%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
            H+G+ R  ++ D   + M + GYEVT      D   +I         +       +  +
Sbjct: 35  FHIGNARPFMIFDAFRNYMEYRGYEVTYVQNFTDVDDKI--------IKRANEEGISPIE 86

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD------------------YS 237
           + E Y    +       +        +    E  +  ++D                   +
Sbjct: 87  VAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKGFAYELNGDVYFNSQA 146

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +   K+ + +L+ LN+   I     D +     PI   +    ++G +       P  +
Sbjct: 147 YKEYGKLSKQNLEELNLGARI-----DVNDEKKHPIDFALWKAKKEGEIGW---QSPWGE 198

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                 ++    +  +  +GD +D      D  + +   ++A  + +  + F        
Sbjct: 199 GRPGWHIE--CSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQSEARSGKQFARYWM--- 253

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
             H+GY+                             +    KMSK  G+F T+R ++ E 
Sbjct: 254 --HNGYI-----------------------------NVDNQKMSKSLGNFFTVRDILSEF 282

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQAKDIF 472
               +RF +L       ++F    + +         N    + +  +  +    +++   
Sbjct: 283 SGQVIRFFLLSAHYRNPVNFSKELILQAKAGMERLANSKERLVFTISHAKGQMNESELEL 342

Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEY 505
                +   R +   + + +T+  + +I  LA +
Sbjct: 343 VSALENHRDRFIEAMDDDINTADAISIIFELARF 376


>gi|295106213|emb|CBL03756.1| leucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 857

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   +   + +        K  +  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 12  RWQKAWADADLYKVTEDPSKPKRYVLEMF-PYPSGDIHMGHVRNYTIGDVIARYSKMRGF 70

Query: 160 EV 161
           +V
Sbjct: 71  DV 72


>gi|291558224|emb|CBL35341.1| glutamyl-tRNA synthetase, bacterial family [Eubacterium siraeum
           V10Sc8a]
          Length = 549

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 29/321 (9%)

Query: 93  LSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +  +YL ++L   +      +           K  +   + +PTG MH+G    A++   
Sbjct: 1   MDNNYLAELLFGDIKTTPEDMFAKYPARTLPDKAAVTRFAPSPTGFMHIGGLYAALISMC 60

Query: 150 LASL------MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           +A        +     +  RE  I     +I   +L+ +          D +  +G Y G
Sbjct: 61  MARQSDGVFYLRLEDTDKKRE--IEHGADEI-ITSLAQYGVCFDEGAAADGEAEKGSY-G 116

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y + + KE+   ++ +L+      +        +  + K    +   +      + S  
Sbjct: 117 PYRQSMRKEIYQTFAKDLVKRGL-AYPCFCSAEELDEIRKAQEAEKADMG----YYGSYA 171

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                    I   I       YV                D+ R  +     +    +D  
Sbjct: 172 KCRNLSIEEIEANIKAGKE--YVLRLRSDGNAENKITCRDLIRGNIEMPENI----MDVV 225

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           LLKSDG  TY     A+    +  G  ++I   G +        E +  A   K  +   
Sbjct: 226 LLKSDGIPTYHF---AHVVDDFLMGTTHVIR--GDEWISSYPLHEQLFRASGLKMPKYAH 280

Query: 384 LLCELVRLYRDGMPIKMSKRA 404
           +   +     +    K+SKR 
Sbjct: 281 IAPIMKLDGGENKKRKLSKRK 301


>gi|281424358|ref|ZP_06255271.1| isoleucine--tRNA ligase [Prevotella oris F0302]
 gi|281401627|gb|EFB32458.1| isoleucine--tRNA ligase [Prevotella oris F0302]
          Length = 1211

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 113/307 (36%), Gaps = 55/307 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           +ND       L+ S FW     ++ +D  ++   G    +Y      E +        N 
Sbjct: 566 LNDW-----NLSRSRFWGTPLPIWRDDKRNEKCIGSLEELY---AEVEKSVAAGVMKNNP 617

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-DFHRGDPSPIRDIIDN---- 279
            ++K   +  DYS +   K+   DL    +   + ++E  +  + +   I    D+    
Sbjct: 618 LKDKGF-VPGDYSKENYDKV---DLHRPYVDDIVLVNEAGEPMKRESDLIDVWFDSGSMP 673

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            A+Q Y +EG + P   K T K + + ++ L  ST  G  V            Y+ AD  
Sbjct: 674 YAQQHYPFEGEIAPEGLKATGKSEDEYRRELVTSTYEGIPVP---------PAYYPAD-- 722

Query: 340 YFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                        I   G D   G+   L A++  V         ++   + L  D    
Sbjct: 723 ------------FINE-GVDQTRGWFFTLHAISTMV-FDHVAFKNVISTGLVL--DAKGN 766

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NP 450
           KMSK  G+      ++D+ G+D VRF M+      + L FD   V E  ++         
Sbjct: 767 KMSKHVGNVTNPFEMIDKYGADPVRFYMMTNSEPWDNLKFDPNGVDETRRKLFGTLYNTY 826

Query: 451 VFYVQYA 457
            F+  YA
Sbjct: 827 SFFALYA 833


>gi|229817095|ref|ZP_04447377.1| hypothetical protein BIFANG_02351 [Bifidobacterium angulatum DSM
           20098]
 gi|229784884|gb|EEP20998.1| hypothetical protein BIFANG_02351 [Bifidobacterium angulatum DSM
           20098]
          Length = 944

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104
           ++ N A +  + L L  +T A+ I A +   P  D V + G       L   +       
Sbjct: 1   MAENGAFLSYKSLKLARMTEAKSIDANL--TPLPDKVGVDG-------LEDKWRAVW--- 48

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
              +G     N   +    +I+      +G +HVGH       D +A     +GY+V
Sbjct: 49  -DDNGTYKFNNTRDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMNGYDV 104


>gi|217418644|ref|ZP_03450151.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217397948|gb|EEC37963.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 996

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 548 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 607

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 608 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 650

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 651 PFRAVLTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 707

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 708 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 755

Query: 499 IV 500
             
Sbjct: 756 AR 757


>gi|156933034|ref|YP_001436950.1| glutamyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166200174|sp|A7MKV5|SYE_ENTS8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|156531288|gb|ABU76114.1| hypothetical protein ESA_00841 [Cronobacter sakazakii ATCC BAA-894]
          Length = 471

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 66/482 (13%), Positives = 137/482 (28%), Gaps = 102/482 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A                     Q     L +     + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFAR-------------------NQGGEFVLRIEDTDLER 48

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                 +                 + D  +   L + E  +    +         +I + 
Sbjct: 49  STPEAIE----------------AIMDGMNWLSLEWDEGPYFQTKR---FDRYNAVIDEM 89

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRD----IIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           L A    +  + S++         +        D   R  + +     P   +     D 
Sbjct: 90  LAA-GTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQD- 147

Query: 305 DRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
               ++F   + G       +  D  + ++DGS TY   +       ++    ++I   G
Sbjct: 148 --GSVVFDDQIRGPIEFSNLELDDLIIRRTDGSPTY---NFCVVVDDWDMEITHVIR--G 200

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     R   +  A+        V L   V +       K+SKR G    +++  D  
Sbjct: 201 EDHINNTPRQINILKALGAP-----VPLYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGY 255

Query: 418 GSDSVRFMMLW----------RKNSELLDFDFCKV--KEQSKENPVFYVQYAYARCRSIF 465
             +++   ++               E++ F       K  S  N    +   +    ++ 
Sbjct: 256 LPEALLNYLVRLGWSHGDQEIFSREEMIKFFALDAVSKSASAFNTDKLLWLNHHYINTLA 315

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525
              + +   L + +   N+   ++       +L+  L E  + ++             Y 
Sbjct: 316 --PEYVATHLQWHIEQENI---DTRNGPQLAELVKLLGERCKTLKEMAQT------CRYF 364

Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL-QL-----------VHAVASIINSG 573
           Y+    F            LR V     ++   +L  L           + A A  +  G
Sbjct: 365 YE---DFSEF-DADAAKKHLRPVARQPLEVVRDKLSALTDWTAENVHHAIQATADELEVG 420

Query: 574 LN 575
           + 
Sbjct: 421 MG 422


>gi|121998615|ref|YP_001003402.1| isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166229742|sp|A1WY38|SYI_HALHL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121590020|gb|ABM62600.1| Isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 941

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +AA+ +      VL         D    KMSK  G+ +  +
Sbjct: 560 LYLEGSDQHRGWFQSSLLSSAAIRQAAPYRGVLTHGF---TVDEQGHKMSKSRGNVVAPQ 616

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D +G+D +R  +         D+        +       +Q      R +   A+ +
Sbjct: 617 DVMDRLGADILRLWVASA------DYSGEIAVSDN------ILQRTADAYRRMRNTARFL 664

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             +L      R+ +  E         +    A   R++  A    E +++
Sbjct: 665 LGNLHGFEPGRDALVAEQLLPLDRWAVARTRALQERIVA-AYDRYELHRI 713


>gi|157105567|ref|XP_001648925.1| valyl-trna synthetase [Aedes aegypti]
 gi|108880047|gb|EAT44272.1| valyl-trna synthetase [Aedes aegypti]
          Length = 1048

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 53/200 (26%), Gaps = 36/200 (18%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           SP Y+     S          EY R       +  +     N TG +H+GH     + D 
Sbjct: 93  SPQYVEAAWYSWWEKEGFFKPEYARKENNPNGQFVMVIPPPNVTGSLHLGHALTNAIEDC 152

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +       G         + AG     +     WR Q+                      
Sbjct: 153 ITRWNRMKGRTTLWVPGCDHAGIATQVVVEKKLWREQK---------------------- 190

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                        +   EK++  +  +  +   +I    LK L   +D   +        
Sbjct: 191 ---------QTRHDLGREKFIEKIWQWRNEKGDRIYHQ-LKRLGSSYDWSRACFTMDPKL 240

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              + +    L  +G +Y  
Sbjct: 241 CKAVTEAFVRLHERGMIYRS 260


>gi|21673150|ref|NP_661215.1| isoleucyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81791910|sp|Q8KFL5|SYI_CHLTE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21646227|gb|AAM71557.1| isoleucyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 1084

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + ++ A  NV++   +    D    KMSK  G+ +     ++
Sbjct: 584 GVDQTRGWFYTLHAIATLIFDRPAYRNVVVNGHI---LDKSGQKMSKSKGNVVDPFESME 640

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + G+D++R ++M+         F+  +++E+ ++       +  F+V YA
Sbjct: 641 QYGADAIRWYLMITSPPWRPKLFNAAEIEEEQRKFFRAFINSYNFFVLYA 690


>gi|15604286|ref|NP_220802.1| leucyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226188|sp|Q9ZDB1|SYL_RICPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3860978|emb|CAA14878.1| LEUCYL-TRNA SYNTHETASE (leuS) [Rickettsia prowazekii]
 gi|292572035|gb|ADE29950.1| Leucyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 828

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K              N   K     +E +   P+G +H+GH R   +GD +A  M   G+
Sbjct: 7   KWQKIWQEEKAFQVSNESSKPKYYVLEML-PYPSGKIHIGHVRNYSIGDVIARFMTMQGF 65

Query: 160 EV 161
            V
Sbjct: 66  NV 67


>gi|315124572|ref|YP_004066576.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018294|gb|ADT66387.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 380

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S + K    I      +         K  I  +   P+G +H+GH R   +GD LA   
Sbjct: 5   ASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYY 64

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 65  RKIGFNV 71


>gi|306825043|ref|ZP_07458385.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432479|gb|EFM35453.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 679

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 107/336 (31%), Gaps = 51/336 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A       Q  +  
Sbjct: 29  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFCLTGLDEHGQKIQQKAEEAGITPQAYVDG 88

Query: 192 NDSDLPE----------------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-K 234
             + + E                  Y    +  V + L  +   ++       W  +  +
Sbjct: 89  MAAGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ--DDIYLGEYSGWYSVSDE 146

Query: 235 DYSVQAMMKIIRDDLKAL-------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV- 286
           ++  ++ +  +  D   +       +     ++SE+ +          +++         
Sbjct: 147 EFFTESQLAEVFRDEAGIVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFI 206

Query: 287 -----YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
                   +L        +   + R    +   +  +      +  D    Y  A L Y 
Sbjct: 207 TPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYATA-LGYG 265

Query: 342 KCKYERGFDNMIY-----VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           +  +   FD         ++G D    HS Y      +   +  K  +  +     V   
Sbjct: 266 QDDH-TNFDKFWNGTVFHMVGKDILRFHSIY---WPILLMMLDIKLPERLIAHGWFV--M 319

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           +DG   KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 320 KDG---KMSKSKGNVVYPEMLVERYGLDPLRYYLMR 352


>gi|288818060|ref|YP_003432408.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787460|dbj|BAI69207.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751661|gb|ADO45144.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 100/319 (31%), Gaps = 41/319 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V  D LA      GY V      ++ G +I   A       ++    N  + 
Sbjct: 17  HIGHAYTTVAADVLARFYRQRGYSVFFLTGTDEHGLKIQKSAQERGISPKELADQNAENF 76

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKALN- 253
            +             +  +      +   +E+ +  V++  V++     I + + +    
Sbjct: 77  KKL-----------WKFMNISYDRFIRTTDEEHIKFVQEVFVKSYENGDIYKGEYEGWYC 125

Query: 254 IQHDIFISEDDFHRGDPSPIR-----------------DIIDNLARQGYVYEGILPPPKS 296
           +  + F  E +   G+  P+                     + L R    ++  + P   
Sbjct: 126 VGCEEFKPESELLEGNICPVHLKPCEYVKEPSYFFRLSKYEEELIRLYEWHKDFIMPEYR 185

Query: 297 KTTQKCDMDRKQLLFRSTMVGD----DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN- 351
           +      + +       T         ++ P  +    Y +F A   Y    Y+R     
Sbjct: 186 RNEVISFVKQGLKDLSITRPSVRVKWGIEVPFDREQTIYVWFDALFNYISALYDRPHYWP 245

Query: 352 -MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
             ++++G D    + R  AV            V        +      KMSK  G+ I  
Sbjct: 246 ADLHLVGKD----ILRFHAVYWPAFLMSVGYQVPKSIFAHGWWKVEGKKMSKSLGNVIDP 301

Query: 411 RHVVDEVGSDSVRFMMLWR 429
             +V + G D VR+ +L  
Sbjct: 302 YKMVQDYGLDEVRYFLLRE 320


>gi|284166921|ref|YP_003405200.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016576|gb|ADB62527.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 882

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 15/106 (14%)

Query: 346 ERGFDNMI---YVMGSDH-------SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           ER  D M    YV G +H       S +  ++ A    +  ++   N+L   +V+L    
Sbjct: 512 ERANDWMPVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFTNLLAQGMVQL---- 567

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
              KMSK  G+ ++ + +V+E G+D+ R  M+     E  DFD+ +
Sbjct: 568 EGEKMSKSKGNVVSPQRIVEEYGADTARLFMMQAAQPER-DFDWSE 612


>gi|240850631|ref|YP_002972031.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267754|gb|ACS51342.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 519

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 98/328 (29%), Gaps = 41/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA     +G  V      ++ G ++   A ++    QQ    
Sbjct: 14  PNGAPHIGHAYSAIASDVLARFQRLNGKNVFFLSGTDEHGLKMQQTAAALGMTPQQLADR 73

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           N +   +           +++   +                  + + +     ++ +   
Sbjct: 74  NSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEANGDIYLGRYTGWYSVRQEAY 133

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQG-----YVYEG 289
            + K   I  D             +  E+ +        + +++   +            
Sbjct: 134 YEEKDTEIGPDNIRREKELGSPVEWNEEESYFFRLSHYEKALLEYYEKHPDFIAPLERRN 193

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
            +        +   + R    +   +  +      +  D    Y +A   + +   +R F
Sbjct: 194 EIISFIKSGLKDISISRASFNWGIAVPENPKHVMYVWVDALTNYLSAIGFFNENSKKRDF 253

Query: 350 ----DNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                ++I   G D    H+ Y     A   +   +  +       L+         KMS
Sbjct: 254 WPANTHII---GKDIIRFHAVY---WPAFLMSAGIELPKNIFAHGFLLN-----RGAKMS 302

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +    +VD  G D VR+ +L  
Sbjct: 303 KSIGNVVDPFEMVDHYGLDQVRYFLLRE 330


>gi|189500815|ref|YP_001960285.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496256|gb|ACE04804.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 1080

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 105/299 (35%), Gaps = 50/299 (16%)

Query: 195 DLPEGYYPGV--YLK--HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
           D+P  YY     Y++   +   + +         PE                 + R+   
Sbjct: 404 DVPVIYYARESWYIRTTDIADRMVELNGQINWCPPEIGSGRFGNWLEENKDWALSRERF- 462

Query: 251 ALNIQHDIFISEDDFHRGD---PSPIRDI--IDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                  I++SE DF  GD      +  I  ++ L   GY+          K  +  D  
Sbjct: 463 -WGTPLPIWVSE-DFSIGDGPDSGKVFAIGSVEELQE-GYI------DIDGKQYRLGDAL 513

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYERGFDNMIY------VMGS 358
            + L+    +    VDR     DG       +L   +       F  + Y      V  +
Sbjct: 514 AEGLV-ELDLHKPFVDRVYFIRDGRRYCRTPELIDVWFDSGSMPFAQLHYPFENREVFDT 572

Query: 359 -----------DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                      D   G+   L A+ A + +K A  N+++   +    D    KMSK  G+
Sbjct: 573 TFPADFIAEGVDQTRGWFYTLHAIGALIFDKPAYKNLVVNGHI---LDRKGQKMSKSKGN 629

Query: 407 FITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYA 457
            +     +++ G+DS+R +++L         F+  +++E+ ++       +  F+V Y+
Sbjct: 630 VVDPFETMEKYGADSLRWYLILSSPPWRPKSFNSDEIEEEQRKFFRAFINSYNFFVMYS 688


>gi|156937015|ref|YP_001434811.1| valyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156565999|gb|ABU81404.1| valyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 792

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 36/195 (18%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   + S       +  +      K  I+     P    H+G      + D +A  M   
Sbjct: 16  IEDQVRSWWEKEDWWKFDPNSPKPKFVIDTPPPYPAPLWHIGAAVSYAMHDMIARAMRMM 75

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GYEV   Y I                        + + LP   Y   YL           
Sbjct: 76  GYEVL--YPIG----------------------FDRNGLPIELYVEKYL----------- 100

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                    EK+L   +   + + ++ +++ LK L I  DI            +  +   
Sbjct: 101 GLTPWKTDREKFLETCRQV-LDSWVEKMKETLKRLLIAADIDNPYQTDSPDYRAFTQATF 159

Query: 278 DNLARQGYVYEGILP 292
               ++G VYE   P
Sbjct: 160 IEAWKKGLVYEAERP 174


>gi|126642773|ref|YP_001085757.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|126388657|gb|ABO13155.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 776

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 33/178 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       G                           +  L
Sbjct: 5   PNVTGSLHMGHGFNNAIMDALTRYNRMMG---------------------------KNTL 37

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +   +D        V  + +G +   ++      F E+ W    K+ S   + K IR   
Sbjct: 38  WQPGTDHAGIATQMVVERQLGLQGVTRHDLGREKFIEKVWE--WKEQSGGTITKQIR--- 92

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             L    D          G  + ++++   L   G +Y G          Q    D +
Sbjct: 93  -RLGSSVDWSRERFTMDEGLSNAVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLE 149


>gi|90419373|ref|ZP_01227283.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336310|gb|EAS50051.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 947

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +        +      + E+      +      L RD    KMSK  G+
Sbjct: 555 TGFD-IIFFWVAR------MMMMGLEFMDEEPFHTVYVHA----LVRDKTGAKMSKSKGN 603

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D++RF +
Sbjct: 604 VVDPLDLIDEFGADALRFTL 623



 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 57/200 (28%), Gaps = 34/200 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV--SANPTGPMHVGHCRCAVVGDT 149
               + +   ++        +               V    N TG +H+GH     + D 
Sbjct: 5   TYDAAAIEPRIAERWEEAEAFRAGAGAAEDAEAFSIVIPPPNVTGSLHMGHALNDTLQDV 64

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G +V  +  ++ AG     +                               V
Sbjct: 65  LVRFERMRGKKVLWQPGLDHAGIATQMV-------------------------------V 93

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            ++LA++      +   + ++  V  +  ++   I+   L+ L    D          G 
Sbjct: 94  ERQLAERKEPGRRDMGRDAFIERVWQWKGESGGAILGQ-LRRLGASCDWSRERFTMDEGL 152

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              +  +   L R+G +Y+ 
Sbjct: 153 SKAVLHVFVELYRKGLIYKD 172


>gi|86740130|ref|YP_480530.1| isoleucyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566992|gb|ABD10801.1| Isoleucyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 1069

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 17/180 (9%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   + AV   V  + +    +LC  + L  DG   KMSK  G+ +    + +  
Sbjct: 575 DQTRGWFYTMMAVGTLVFGRSSY-ETVLCLGLLLDADGR--KMSKHLGNVLDPFELFERH 631

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---RQAKDIFPD 474
           G+D+VR++ML   +     +   +V  ++ E+ V  V   Y    S F     A    P 
Sbjct: 632 GADAVRWLMLAGGSP----WADRRVSHEAIEDIVRKVLLTYWNTSSFFALYAGAAGWRPG 687

Query: 475 LDFDLFPRNVIPQESE-FDTSEL-QLIVHLAEYPRVIEN--ATIAQEPYKLAFYLYDLAS 530
            D    PR   P      D   L +L   +AE    +EN  +  A    ++A ++ DL++
Sbjct: 688 ADPAADPRATPPARRHVLDRWALSELAATVAEVDDALENFDSLRAGR--RIARFVDDLSN 745


>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|61216247|sp|Q72BQ5|SYC_DESVH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 485

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 97/311 (31%), Gaps = 33/311 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AVV D L   +  +G +VT      D   +I   A       QQ         
Sbjct: 36  HIGHARSAVVFDVLVRYLRHTGLDVTFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTF 95

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E       L+   +  A  +  E++   E K +   K Y+  +                
Sbjct: 96  YEDMDRLNVLRADIEPKATGHILEMIALCE-KLIAKGKAYATPSG--------------- 139

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++     F        RDI D       +  G    P  +     D     L   +   
Sbjct: 140 DVYFRVRSFPEYGKLSGRDIDD-------MRSGARVAPGEEKEDPLDF---ALWKAAKPG 189

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
                 P  +    +    + ++      E+     + + G          E   A    
Sbjct: 190 EPSWTSPWGEGRPGWHIECSAMS------EKHMPLPLDIHGGGQDLIFPHHENEIAQTEA 243

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
              +  V    +   +      KMSK  G+F T+R +++    + +RF +L +     +D
Sbjct: 244 ALDKPFVRYW-MHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSPID 302

Query: 437 FDFCKVKEQSK 447
           F F  + E  K
Sbjct: 303 FTFDSMDEAEK 313


>gi|260063616|ref|YP_003196696.1| valyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783061|gb|EAR14234.1| valyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 876

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 70/240 (29%), Gaps = 44/240 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  + K   +  +   EY R++  +     +     N TG +H+GH     + D L   
Sbjct: 8   DPQRVEKQWYTYWME-HEYFRSVPDEREPYTVVIPPPNVTGVLHMGHMLNNTIQDVLVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212
               G                                         + PG     +  E 
Sbjct: 67  ARMMGKNAC-------------------------------------WVPGTDHASIATEA 89

Query: 213 -LADKYSSELLNFP---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
            +  K   E ++      E++L    D++      +I + LK L    D   ++      
Sbjct: 90  KVVAKLRDEGISKDSISREEFLKHAWDWTHNYG-GVILEQLKKLGCSCDWERTKFTMDPD 148

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             + +  +  +L ++G +Y G          +    D +            +  P++ S+
Sbjct: 149 MEASVLQVFVDLYKKGLIYRGYRMVNWDPEARTTLSDEEVNYEERQGFLYHIAYPVVGSE 208


>gi|86150800|ref|ZP_01069016.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841970|gb|EAQ59216.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 809

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S + K    I      +         K  I  +   P+G +H+GH R   +GD LA   
Sbjct: 5   ASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYY 64

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 65  RKIGFNV 71


>gi|330813622|ref|YP_004357861.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486717|gb|AEA81122.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 917

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 90/251 (35%), Gaps = 26/251 (10%)

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
            I + +       ++ EG       K  +      K+  ++      D+      S  S+
Sbjct: 485 LIDEDVFKRIENIFLKEGSDAWFVKKDEEFLGPKYKREDYKKVN---DIVEVWFDSGSSH 541

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           +Y          + +  +   +Y+ GSD   G+       +     +    ++L    V 
Sbjct: 542 SYVLEK------RKDLKWPADMYLEGSDQHRGWFHSSLLQSCGTRGQAPYKSILCHGFVV 595

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ ++   V+ + G+D +R  ++    S+ L  D   +++ S+   
Sbjct: 596 ---DGKGQKMSKSLGNVVSPDEVIKKYGADILRLWVIASDYSDDLKIDNAILEQHSQ--- 649

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 +Y + R+ FR           D        + SE +  E  ++  ++      +
Sbjct: 650 ------SYRKIRNTFRFLLGNLN----DQLNLEETVKLSECEEIEKYILHKISSLDSEFK 699

Query: 511 NATIAQEPYKL 521
           N   + + +K+
Sbjct: 700 NLNKSYDFHKI 710


>gi|320528328|ref|ZP_08029490.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131242|gb|EFW23810.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 870

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 48/195 (24%), Gaps = 35/195 (17%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            +      +  +  G     +       + I     N TG +H+GH     + D ++   
Sbjct: 12  KAVEEGKYNRWIEKGYFTAGDKSKDPFTIVI--PPPNVTGILHIGHAWDNTLQDIISRYK 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY++                           L+    D             +  E  
Sbjct: 70  RMQGYDM---------------------------LFLPGMDHAGIATQAKVDARLKSEGI 102

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +Y      F E  W             K IR     L    D          G    +R
Sbjct: 103 SRYDLGREKFLERAW------EWKAEYAKTIRTQWGKLGNSLDYSRERFTMDDGFNDAVR 156

Query: 275 DIIDNLARQGYVYEG 289
            +   L  +G +Y G
Sbjct: 157 HVFVKLYNEGLIYRG 171



 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 29/185 (15%)

Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DLA  Y       G+D +I+         V R+   A   ++ +   +VL+     L 
Sbjct: 466 TEDLARYYPTNTMVTGYD-IIFFW-------VARMAFQARHFTKNRPFKDVLIHG---LL 514

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V++E G D++RF +           D   + E+ +    F
Sbjct: 515 RDAQGRKMSKSLGNGIDPMKVIEEYGIDALRFFLTTNSTPGQ---DMRYIPEKVEAAGNF 571

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A  R +F    +     D DL   ++                 +      I + 
Sbjct: 572 INKIWNAS-RFVFMNLPEGMKVEDVDLTHLSLADAWI------------INRLNETITHV 618

Query: 513 TIAQE 517
           T   E
Sbjct: 619 TENME 623


>gi|297623515|ref|YP_003704949.1| glutamyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297164695|gb|ADI14406.1| glutamyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 502

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 96/292 (32%), Gaps = 42/292 (14%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINT 176
           + +  ++ +PTG  HVG    ++     A       ++     +  R             
Sbjct: 1   MTVTRIAPSPTGDPHVGTAYMSLFDYVFAKQQGGTFILRIEDTDQKR----------YRP 50

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            A +  +   + L     + PE   P   Y +   + L  +Y+ +LL           + 
Sbjct: 51  EAEARLYEALRWLGLEPDESPEKGGPNAPYRQSERRALYARYAEQLLAEG-----KAYRA 105

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +     ++ IR +L+A  + H          + +        D  A  G  +   L  P 
Sbjct: 106 FETPEELEAIRLELQAKGLGHGYDGRARALSKEES-------DRRAAAGEPFAVRLVTPD 158

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              T   D+ R ++   +  V D     LLKSDG  TY    LA     +  G  +   V
Sbjct: 159 EGETVVRDLLRGEVRIPNREVPDA---VLLKSDGLPTYH---LAVVVDDHLMGVTHA--V 210

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            G +          +  A    +      +   + + ++    K+SKR  D 
Sbjct: 211 RGEEWLPTAPIHVLLYRAFGWPEP-----VWVHMPVLKNAAGKKLSKRKDDT 257


>gi|256027519|ref|ZP_05441353.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 872

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 25  KWQEKWSKDNIFKTENEVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 84

Query: 160 EV 161
            V
Sbjct: 85  NV 86


>gi|75911132|ref|YP_325428.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731296|sp|Q3M3A3|SYL_ANAVT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|75704857|gb|ABA24533.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 872

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 92  YLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P+ L +    + V  G++  +    K     +      P+G +H+GH R   + D +
Sbjct: 4   RYNPAILEEKWQKTWVELGLDKTQTQSNKPKFYALSMF-PYPSGSLHMGHVRNYTITDVI 62

Query: 151 ASLMAFSGYEV 161
           A L    GY V
Sbjct: 63  ARLKRMQGYRV 73


>gi|319900902|ref|YP_004160630.1| glutamyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415933|gb|ADV43044.1| glutamyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 508

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL+  +  ++       ++A    I   
Sbjct: 68  GIPFDEGVSFGGNHGPYRQSERREIYKKYVQVLLDAGK-AYIAFDTPEELEAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L   G  Y         +     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLSKEEVDALIAGGKQYVVRFKIEPDENVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|237653453|ref|YP_002889767.1| valyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624700|gb|ACR01390.1| valyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 994

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 61/238 (25%), Gaps = 49/238 (20%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R+        G               I     N TG +H+GH     + D L       G
Sbjct: 14  RRWYPEWESRGFFDAGLDKSNPAAFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRG 73

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                +   + AG   QI                                  V +   D 
Sbjct: 74  DNTLWQPGTDHAGIATQI----------------------------------VVERQLDA 99

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 +   E++L  V ++   +   I R  ++ L    D          G    + + 
Sbjct: 100 QGVSRHDLGRERFLEKVWEWKEYSGGTITRQ-MRRLGTSPDWKRERFTMDEGLSRTVTET 158

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-----SDG 329
              L  +G +Y G       K     D      +    +V ++ D  L       SDG
Sbjct: 159 FVRLYNEGLIYRG-------KRLVNWDPKLGTAVSDLEVVSEEEDGKLYHILYPFSDG 209


>gi|209517453|ref|ZP_03266294.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502107|gb|EEA02122.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 945

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 27/229 (11%)

Query: 281 ARQGYVYEGILPPPK--SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +  ++  +K  ++  Q L    ++GD+ +      D        G+
Sbjct: 499 KETGELHPRTLELLEQVAQRVEKDGIEAWQTLDPRELIGDEANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDELQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRPPYNALLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                   Y R R+  R       D DF    R  +    E D   + L
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFVQHARP-LEDWLEIDRYAVAL 711


>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|84029567|sp|Q4L5P4|SYI_STAHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 916

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 101/309 (32%), Gaps = 57/309 (18%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRG 268
           K   ++L+  EE    +  D+    +  +IRD  +          +   +F +E+     
Sbjct: 418 KVRQDILDAIEETDFKV--DWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIM 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               +  + D     G            + EG   P     T   +MD   + F S    
Sbjct: 476 TKETVNHVADLFEEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKEMDIMDVWFDS---- 531

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                      GS           + + E  F   +Y  GSD   G+       A A   
Sbjct: 532 -----------GSSH-----RGVLENRPELSFPADLYFEGSDQYRGWFNSSITTAVATRG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     +L    V    DG   KMSK  G+ I    VV + G+D  R  +        + 
Sbjct: 576 QAPYKFLLSHGFVM---DGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVR 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++ +Q+ +         Y + R+  R       D + D    +VIP E+E    + 
Sbjct: 633 IS-DEILKQTSD--------VYRKIRNTLRFMLGNINDFNPD---TDVIP-EAELLEVDR 679

Query: 497 QLIVHLAEY 505
            L+  L E+
Sbjct: 680 YLLNRLREF 688


>gi|33862238|ref|NP_893799.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|81575511|sp|Q7UZI3|SYV_PROMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33634456|emb|CAE20141.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 918

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 102/296 (34%), Gaps = 30/296 (10%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFHRGDPS 271
            +  S+   F  ++W  + KD+        I   L     +   + +  SED   +  P 
Sbjct: 383 KELDSKKPTFIPQRWEKVYKDWLDNINDWCISRQLWWGHQIPAWYVLKQSEDSIDQNTPY 442

Query: 272 PI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            + R+  + L++    +   L   + K             F +    +  D     +D  
Sbjct: 443 VVARNEKEALSKATKEFGSNLQLIRDKDVLDTWFSSGLWPFSTLGWPNIND-----ADFK 497

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
             Y  + L         GFD +I+         V R+  +    +      +V +  LV 
Sbjct: 498 KWYPNSVLIT-------GFD-IIFFW-------VARMTMMGKTFTNNIPFKDVYIHGLV- 541

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
             RD    KMSK +G+ I    ++D+ GSD++RF +L        D      +   KEN 
Sbjct: 542 --RDENNKKMSKSSGNGIDPLLLIDKYGSDALRFALLREVAGAGQDIRLDYDR---KENT 596

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506
              V+ +      ++   K +  +  F          E   + S+  ++  L +  
Sbjct: 597 SSTVEASRNFANKLWNATKFVLINKTFSENCSLNESDEKNLELSDKWILSKLNQLN 652



 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 63/236 (26%), Gaps = 33/236 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + +       S   +  N    G    I     N TG +H+GH     + D +    
Sbjct: 15  PSQVEQKWQKRWDSLRAFSPNPSDNGDPFCIVIPPPNVTGSLHMGHAFNTALIDVIIRFQ 74

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G  V         G    ++A+      Q      +S+                   
Sbjct: 75  RLLGKNVLCLP-----GTDHASIAVQTILEKQLKTEGKNSE------------------- 110

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E++L     +  Q+  KII   LK +    D               + 
Sbjct: 111 --------DIGREEFLKRAWIWKEQSGGKIISQ-LKRIGYSVDWERERFTLDEKLNEAVV 161

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           +  + L  +  +Y G         +Q    D +  +            PL+   G 
Sbjct: 162 EAFNILHEKKLIYRGEYLVNWCPASQSAVSDLEVEMQEVNGYLWHFKYPLISDQGQ 217


>gi|326333915|ref|ZP_08200146.1| leucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948276|gb|EGD40385.1| leucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 827

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 60/167 (35%), Gaps = 19/167 (11%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           Y+ G +H+     Y +        +      +         ++   G   KMSK  G+ +
Sbjct: 545 YLGGDEHAVLHLLYARFFTKALRDIGLIDWDEPFSAYLSQGKVINGGK--KMSKSLGNGV 602

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
            L  V++E G D+ R  +++    E  + D+  V   S      ++Q A       +R A
Sbjct: 603 NLSDVLEEFGVDATRLTLVFASPPED-NIDWADV---SPGGSAKFLQRA-------WRLA 651

Query: 469 KDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATI 514
            D+  +        +V   + +    +E + ++    +  V+     
Sbjct: 652 GDVTSEPGVSFDDGDVALRRVTHKTVAEAEQLIESYRFNVVVARVME 698


>gi|269119362|ref|YP_003307539.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613240|gb|ACZ07608.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 865

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 80/260 (30%), Gaps = 34/260 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            K  S      I    N+  K     +E   A P+G +HVGH R   +GD +A       
Sbjct: 11  NKWQSKWNKDNIFKSENVSDKENYYILEMF-AYPSGNLHVGHLRNYTIGDAIARYKKMKG 69

Query: 153 --LMAFSGYEVTR---EY-------YINDA--------GAQINTLALSVFWR-----YQQ 187
             ++   G++      E        +  D           Q+  + +S  W      YQ+
Sbjct: 70  FNVLHPFGWDSFGLPAENAAIENKAHPGDWTRKNIDNMKRQLKLMGISHDWSRELATYQE 129

Query: 188 ALYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
             Y  +  +    Y  G+  K           + +L   + +     +      + K + 
Sbjct: 130 NYYKWNQWMFIKMYEKGLVYKKKSYVNWCPECNTVLANEQVEDGKCWRHSKTDVIQKELD 189

Query: 247 DDLKALNIQHDIFI-SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                +    +  + S DD     P  +  +  N   + Y  E        KT       
Sbjct: 190 QWYFKITDYSEELLQSHDDLAGNWPDKVITMQKNWIGKSYGTEIDFVLEDGKTKIPAFTT 249

Query: 306 RKQLLFRSTMVGDDVDRPLL 325
           R   L+  T V    + P++
Sbjct: 250 RPDTLYGVTYVVLAPEHPVV 269


>gi|224534810|ref|ZP_03675382.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514058|gb|EEF84380.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 480

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 114/340 (33%), Gaps = 49/340 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKALRFLGYKVDYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + +  +           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVHEISEFFTEAFFKDCRKLNIVYPNKVLVASKHIPIMIEVIKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLINKDMTFSRVDIDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +  V   +++K   I V    L+  Y      KMSK  G+FIT+  + ++       
Sbjct: 248 INEIAIVECFLNKKWCDIFVHGEFLIMDYN-----KMSKSRGNFITVEDLEEQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFCKVKEQS--KENPVFYVQYAYAR 460
           R++ L       L F    ++     +EN +  + Y YA 
Sbjct: 303 RYLCLTSHYRSQLKFSLNNLQASRIARENMINRLSYFYAS 342


>gi|190345845|gb|EDK37801.2| hypothetical protein PGUG_01899 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 502

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 94/292 (32%), Gaps = 56/292 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA                N  G  +  L  +   R  + 
Sbjct: 38  APSPTGFLHLGSLRTALYNYLLAK---------------NTGGQFLLRLEDTDQKRLVEG 82

Query: 189 LYNN------------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              N            D    +G   G Y +     +  +Y+ EL+              
Sbjct: 83  AEENIYRSLKWCGIEVDEGPQQGGPYGPYRQSDRTSIYQRYAEELIQLGHAYRCS----- 137

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             Q  +  +RD   AL     +       H  +PS   DII   +   Y     L     
Sbjct: 138 CSQERLLFLRDSAAALKPPTTVTYDRKCLH--NPSETGDIIRFKSPSVYEPFDDLLHGHL 195

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
              Q+ + D ++            D  +LKSDG  TY  A++       +     + +V+
Sbjct: 196 NLQQQYNSDDRR----------YDDFVILKSDGLPTYHFANV------VDDHLMRITHVI 239

Query: 357 -GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            G +      +  A+  A   +  Q        + L       K+SKR+GD 
Sbjct: 240 RGEEWLPSTPKHIALYRAFGWEPPQFTH-----IPLLTSMADKKLSKRSGDI 286


>gi|72390541|ref|XP_845565.1| valyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358810|gb|AAX79263.1| valyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70802100|gb|AAZ12006.1| valyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 975

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 50/202 (24%), Gaps = 35/202 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNL---IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           Y+              SG     +      +G    I     N TG +H+GH     V D
Sbjct: 12  YIPKDVESGWYEWWEESGFFRPASDMGRPIRGRSFVIVSPPPNVTGHLHIGHALTGAVQD 71

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G +       + AG     +                               
Sbjct: 72  ALIRFHRMKGDDTLYLPGTDHAGIATQVV------------------------------- 100

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V K L  +      +   E++L  V  +  +    +I   L+ + +  D           
Sbjct: 101 VEKRLMKESGKSRHDVGREEFLKQVWVFK-ENHCGVITRQLRRIGLSLDWSRERFTMDEQ 159

Query: 269 DPSPIRDIIDNLARQGYVYEGI 290
               + +    L   G +Y   
Sbjct: 160 CAKAVVEGFVKLHEDGLIYRAT 181


>gi|54307696|ref|YP_128716.1| valyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46912119|emb|CAG18914.1| putative Valyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 978

 Score = 43.0 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 29  TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 88

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 89  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 118 KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGLSA 176

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 177 ATQEVFVRLFEEDLIYRGKRLVNWDPKLHTAISDLE 212


>gi|326383789|ref|ZP_08205474.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197553|gb|EGD54742.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 523

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 105/336 (31%), Gaps = 57/336 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D LA   A  G++V  +   ++ G ++   A        +    
Sbjct: 21  PNGAPHIGHAYEFISADVLARFKALDGFDVRFQSGTDEHGQKMQQTAEKEGVSTAELAKT 80

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N       +        +G +L+    +   +        I K   ++A   I  D    
Sbjct: 81  NSDRFEALH------MALGTDLSRFIRTTDTDH-HRASEEIWKR--MEAAGDIYLDSYAG 131

Query: 252 LN-IQHDIFISEDDF-----HRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQ 300
              ++ + F +ED+       R   +    ++     Q Y      Y+  L     +  +
Sbjct: 132 WYDVRDEAFFTEDETTVDADGRRVATENGHVLTWTEEQTYFFRLSNYQDRLLALYDEHPE 191

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM---- 356
               D ++   RS + G   D  + +     T+       +  K     D+++YV     
Sbjct: 192 FIGPDVRRNEVRSFVAGGLNDLSISR----TTFD------WGVKVPGAPDHVMYVWVDAL 241

Query: 357 ----------GSDH--------SGYVK-----RLEAVAAAVSEKKAQINVLLCELVRLYR 393
                       +           ++      R   V        A + V        + 
Sbjct: 242 TNYLTGVGFPDDEQTLSRYWPADLHIIGKDIIRFHCVYWPAFLMSAGLEVPRRVFAHGFL 301

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    +V++ G D+VR+  L  
Sbjct: 302 FNRGEKMSKSIGNVVDPHELVEQFGLDAVRYFFLRE 337


>gi|315585949|gb|ADU40330.1| leucine--tRNA ligase [Helicobacter pylori 35A]
          Length = 806

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 88  FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           FIN+       +K       +     ++      K  +  +   P+G +H+GH R   +G
Sbjct: 3   FINI------EKKWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIG 55

Query: 148 DTLASLMAFSGYEV 161
           D L        Y V
Sbjct: 56  DALVRYYRLHHYNV 69


>gi|224023585|ref|ZP_03641951.1| hypothetical protein BACCOPRO_00289 [Bacteroides coprophilus DSM
           18228]
 gi|224016807|gb|EEF74819.1| hypothetical protein BACCOPRO_00289 [Bacteroides coprophilus DSM
           18228]
          Length = 509

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 102/291 (35%), Gaps = 24/291 (8%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                KV + F + +PTG +H+G  R A+     A      G ++       D+   +  
Sbjct: 4   TMAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPG 59

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               +   ++      D  +  G   G Y +   +++  KY   LL+  +  ++      
Sbjct: 60  AEEYIIESFRWLGIKFDEGVSFGGNYGPYRQSERRDIYKKYVQILLDNGK-AYIAFDTPE 118

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            ++A  K I               +     R   +  ++ +D L  +G  Y        +
Sbjct: 119 ELEAKRKEI--------ANFQYDATTRTSMRNSLTLPKEEVDKLIAEGKQYVVRFKIEPN 170

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYV 355
           +     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I  
Sbjct: 171 EDVHVHDIIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR- 223

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G +          +  A   +          L+ L  DG   K+SKR GD
Sbjct: 224 -GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLL-LKPDGNG-KLSKRDGD 271


>gi|321310936|ref|YP_004193265.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802780|emb|CBY93426.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 711

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVSE--K 377
           L K DG   Y   D    K    R     +YV G +H+     Y +        +     
Sbjct: 420 LKKDDGG--YHDLDSPEAKDILRRWLPVDVYVGGQEHAAMHLLYARFWHKFLHKLGIVST 477

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K     L  + + L  DG   KMSK  G+++ +  ++D  G+D +R +         L F
Sbjct: 478 KEPFKALFNQGMVLGSDGT--KMSKSKGNYVNIDEMIDLYGADVLR-LYEAFSGPTTLSF 534

Query: 438 DFCK 441
            + +
Sbjct: 535 KWEE 538


>gi|302870971|ref|YP_003839607.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573830|gb|ADL41621.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 653

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 104/336 (30%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +HVGH  C V  DT+A      GY+V      ++ G +I   A       QQ +  
Sbjct: 15  PSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKAQEAGKTPQQYVDE 74

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
             + + E             +L +    + +   EE+   +V+     +     I + + 
Sbjct: 75  IVASIKEL-----------WKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCD 303
           +       + F  +     G        ++    + Y      Y+  L     +  +   
Sbjct: 124 EGWYCTPCESFWLDRQLVDGKCPDCGRPVERAREESYFFRLSKYQDALMKYIEEHPEFIV 183

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM----- 356
              +     +  +   ++   +                K   E  FD  ++IYV      
Sbjct: 184 PQSRANEMINNFIKPGLEDVCVSR-----------TTIKWGIEVPFDPKHVIYVWIDALS 232

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG------------ 395
                      D S + K   A    V ++  + + ++   + +                
Sbjct: 233 NYITALGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWL 292

Query: 396 --MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    +  + G DS+R+ +L  
Sbjct: 293 LLEGGKMSKSKGNVVDPVILAQKYGVDSLRYFLLRE 328


>gi|297617013|ref|YP_003702172.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144850|gb|ADI01607.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 926

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 17/169 (10%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+     + + AV+ +     VL    V    D    KMSK  G+ +   +
Sbjct: 556 YLEGSDQHRGWFNSSLSTSVAVTGRAPYRIVLTHGFVV---DEQGRKMSKSLGNVVDPLN 612

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           +++++G+D +R  +         D+       ++  N       AY + R+  R      
Sbjct: 613 IIEKMGADILRLWVSSA------DYRGDVAASENIMNQAAE---AYRKIRNTCR----FI 659

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
               +D  P     +  +    E  +++ L +  + +  A    E + +
Sbjct: 660 LGNLYDFQPEQDRVKYEDLPELERWVLLKLHKLIQRVTRAYEDFEFHVV 708


>gi|167585706|ref|ZP_02378094.1| isoleucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 945

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 99/309 (32%), Gaps = 41/309 (13%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K   +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDALQFPAD--LYLEGSDQHRGWFHSSLLTASMLDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D D+      V  +  E D   +     L     ++
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAQHALPV-GEWLEIDRYAVAFSAQLQA--ELL 720

Query: 510 ENATIAQEPYKLA----FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
            +     E + +      Y    +    G +    ++ RL    A++      +  L H 
Sbjct: 721 AH-YEKYEFHPVVAKLQTYC---SEDLGGFYLDVLKD-RLYTSAADSTARRSAQTALYHL 775

Query: 566 VA---SIIN 571
                 ++ 
Sbjct: 776 TQGLLRVLA 784


>gi|15964550|ref|NP_384903.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307314740|ref|ZP_07594336.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307320034|ref|ZP_07599455.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|15073728|emb|CAC45369.1| Probable isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894249|gb|EFN25014.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306898964|gb|EFN29610.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 969

 Score = 42.6 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 99/303 (32%), Gaps = 44/303 (14%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAAD 337
            V   IL   + +       +  +  F              D+      S  ++T+   D
Sbjct: 530 EVNARILVAFEKEGADAWFAEGAKERFLGNDHDHARWHQVTDILDVWFDSGSTHTFTLED 589

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
                 + +  +   +Y+ GSD   G+       + A   +     V+         D  
Sbjct: 590 ------RPDLKWPADVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVITHGFTM---DEK 640

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ +T + V+ + G+D +R  ++               ++Q     +     
Sbjct: 641 GEKMSKSKGNTVTPQEVMKDAGADILRLWVMTT----------DYWEDQRLGKTIIQTNI 690

Query: 457 -AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
            AY + R+  R           ++   + +P+       E  ++  LAE  R++     A
Sbjct: 691 DAYRKLRNTIRWMLGTLAHDKGEVVALSDMPEL------ERLMLHRLAELDRLVREGYDA 744

Query: 516 QEPYKLAFYLYDLAS-VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
            +  ++A  L D ++      +   R++     +  +       R  L      +I +  
Sbjct: 745 FDFKRIARALIDFSNVELSAFYFDIRKD----ALYCDAPSSLRRRAAL-----QVIRTLF 795

Query: 575 NII 577
           + +
Sbjct: 796 DCL 798


>gi|313891833|ref|ZP_07825438.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119827|gb|EFR43014.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 634

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 104/330 (31%), Gaps = 51/330 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +H+GH  C  V DT+A      G +V                      +  +    
Sbjct: 16  PSAKLHIGHTYCTTVADTVARFKRLDGKDV------------FFLCGSDEHGQKIEQKAT 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMK--IIR 246
                P  Y     +    ++L  + +    + +   EE+ + +V+    +A  K  I +
Sbjct: 64  EAGVTPIEYV--DKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFQKAYDKGDIYK 121

Query: 247 DDLKAL-----------------NIQHDIF-----ISEDDFHRGDPSPIRDIIDNLARQG 284
              +                   N+  D       +SE+ +           +  +    
Sbjct: 122 GKYEGWYCVPCETFWPESKLLEGNLCADCKRECKRVSEEAYFFKMSKYADRWLKFIEENP 181

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAAD-L 338
           +  E      +     K  ++   +   S   G     D      +  D    Y  A  +
Sbjct: 182 HFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTNYLTAVGI 241

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
              K K+++ +   ++++G +    + R   +   +      I +        +      
Sbjct: 242 EDDKEKFKKYWPANVHLVGKE----IVRFHTIIWPIMLMSLDIEIPKQVYGHGWLVVEGE 297

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           KMSK  G+ +    ++ E GSD++R+ ++ 
Sbjct: 298 KMSKSKGNVVDPIPLIHEFGSDAIRYYLMN 327


>gi|312134269|ref|YP_004001607.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774320|gb|ADQ03807.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 653

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 104/336 (30%), Gaps = 60/336 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+  +HVGH  C V  DT+A      GY+V      ++ G +I   A       Q+ +  
Sbjct: 15  PSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKAQEAGKTPQEYVDE 74

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL 249
             + + E             +L +    + +   EE+   +V+     +     I + + 
Sbjct: 75  IVASIKEL-----------WKLMNISYDDFIRTTEERHKKVVQKIFSKLYEQGDIYKSEY 123

Query: 250 KALNIQ-HDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCD 303
           +       + F  +     G        ++    + Y      Y+  L     +  +   
Sbjct: 124 EGWYCTPCESFWLDRQLVDGKCPDCGRPVERAREESYFFRLSKYQDALMKYIEEHPEFIV 183

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVM----- 356
              +     +  +   ++   +                K   E  FD  ++IYV      
Sbjct: 184 PQSRANEMINNFIKPGLEDVCVSR-----------TTIKWGIEVPFDPKHVIYVWIDALS 232

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG------------ 395
                      D S + K   A    V ++  + + ++   + +                
Sbjct: 233 NYITALGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWL 292

Query: 396 --MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                KMSK  G+ +    +  + G DS+R+ +L  
Sbjct: 293 LLEGGKMSKSKGNVVDPVILAQKYGVDSLRYFLLRE 328


>gi|307947205|ref|ZP_07662540.1| valyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770869|gb|EFO30095.1| valyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 977

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 56/204 (27%), Gaps = 35/204 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N  G +H+GH     + D L       G++   +   + AG  +               
Sbjct: 45  PNVNGSLHMGHALNNTLQDILIRWKRMQGFDTLWQPGTDHAGIALQI------------- 91

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V +++A++          E ++     Y  +    II   L
Sbjct: 92  ------------------AVERQMAERNEPTRREIGREAFIKRAWTYKEEIGSAIINQ-L 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K L    D          G  + +R +   L  +G +Y+           +    D +  
Sbjct: 133 KRLGSSCDWSRERFTMDEGLSAAVRKVFVELYNEGLIYKSKRLVNWDPKMETAISDLEVE 192

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTY 333
              +         PL    G  TY
Sbjct: 193 NIETDGHMWHFKYPLA---GGATY 213



 Score = 37.2 bits (85), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 17/87 (19%)

Query: 347 RGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            GFD +I+   +       +                ++      +  +  D    KMSK 
Sbjct: 579 TGFD-IIFFWVARMMMQGIHFM-------------DEVPFHTVYINSIVVDKNGKKMSKS 624

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRK 430
            G+ +    ++D  G+D+ RF ++ ++
Sbjct: 625 VGNVLDPLDLIDRFGADATRFALVSQE 651


>gi|294055708|ref|YP_003549366.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615041|gb|ADE55196.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 913

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 70/443 (15%), Positives = 136/443 (30%), Gaps = 76/443 (17%)

Query: 151 ASLMAFSGYEVTREYYINDAG-AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           A+ +   G  + RE Y N  G ++   + +      Q  L     +  +       +K  
Sbjct: 328 ANKLEQMGLLIEREPYENSVGFSERGDVPIEPRLSEQWFLKYPKVEEAKRAVEKGIIKFH 387

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                  Y           WL  ++D+ +   +         + + +       +    +
Sbjct: 388 PDRWKKTYL---------HWLNGIQDWCISRQLWWG----HRIPVWYKKGFERSELDFSN 434

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           P  +   ID             P    +     D      L+    +G        + + 
Sbjct: 435 PDHVHVSIDG---------PSDPENWEQEADVLDTWASSYLWPMGNLGWPNPTADQQKEQ 485

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-------- 381
            + Y  + L         GFD +I+   +        + A      E   ++        
Sbjct: 486 DFWYPTSTLVT-------GFD-IIFFWVAR------MIMAGLELFGEDAKELSDEEIAKR 531

Query: 382 ----NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
               N+ +  L+   RD    KMSK  G+      ++++ G+D +RF  +        D 
Sbjct: 532 IPFKNIFIHGLI---RDEKGRKMSKSLGNSPDPLDLIEKFGADGLRFG-ICNIAPTGSDI 587

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
            F + + Q   N    +  A     S FRQ      D +  L   +    +S  D ++  
Sbjct: 588 LFSEDRIQIGRNFCNKLWNA-----SRFRQMSGPMAD-NSSLESIHARIDQSLLDDTDHW 641

Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
           ++  LAE    +E               Y+LA + H  +     +    +V+A+  KL  
Sbjct: 642 ILGRLAEVTAEVEKCFTD----------YELAPLTHQIYGFFWSDFCDWYVEASKGKLKG 691

Query: 558 M---R---LQLVHAV-ASIINSG 573
               R   L +   V   ++   
Sbjct: 692 SEAERDHCLAIQDLVLRQVLQLA 714



 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 66/240 (27%), Gaps = 33/240 (13%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +   + + +G         +     I     N TG +H+GH     + D      
Sbjct: 11  KEVEERWYQNWLEAGCFKAEVDTDR-EPYAIMIPPPNVTGMLHMGHVLDNTLQDIFIRRA 69

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G                     +V W+         +              V K+L 
Sbjct: 70  RLEG--------------------KAVLWQPGTDHAGIATQTK-----------VEKQLR 98

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +      +   E +L  V ++  Q+   +I + L+ L    D   +           + 
Sbjct: 99  AETGQTKYDLGREGFLEKVWEFREQSG-GVILNQLRKLGASCDWDRTSFTLDEDYSKGVL 157

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
                L  +GY+Y G         T     D + ++         +   L++ DG  T+ 
Sbjct: 158 TAFVKLYERGYIYRGQRMVNWCPATHTAISDEEVIMKPQNGFFYKMRYELVEPDGERTHL 217


>gi|293604537|ref|ZP_06686942.1| valine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817118|gb|EFF76194.1| valine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 964

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 68/256 (26%), Gaps = 48/256 (18%)

Query: 100 KILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +  +     G       +  G       I+F   N TG +H+GH     + D L      
Sbjct: 31  RWYAEWDKRGYFTAGQHVKTGTESQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYRRM 90

Query: 157 SGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
           SG +       + AG   QI                                  V +   
Sbjct: 91  SGDDTVFIPGTDHAGIATQI----------------------------------VVERQL 116

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D       +   EK++  V ++  ++    I + ++ L    D               + 
Sbjct: 117 DAQKVSRHDLGREKFVEKVWEWKEKSG-NAITEQVRRLGASADWPREYFTMDERMSRGVV 175

Query: 275 DIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
           +    L +QG +Y G         L    S    + +     +        D     + K
Sbjct: 176 ETFVRLHKQGLIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYPFVDGPQTIVDK 235

Query: 327 SDGSYTYFAADLAYFK 342
              + T     +A  +
Sbjct: 236 DGQTVTLRGMTIATTR 251


>gi|257792394|ref|YP_003183000.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476291|gb|ACV56611.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 529

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 103/355 (29%), Gaps = 87/355 (24%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +  DT+A     +GY+V     +++ G ++   A       Q
Sbjct: 14  YVNAAP----HLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMTPQ 69

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW---LPIVKDYSVQAMMK 243
               + +             +     L   Y+  +               +D   +    
Sbjct: 70  DWCDSMEPAF----------RDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWC- 118

Query: 244 IIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +   +    +  + + +E D  + D                  EG L  P  K   + 
Sbjct: 119 -YKGSYEGWYCVHEETYYAESDLEKND------------------EGELVCPDCKRPVQK 159

Query: 303 DMDRKQLLFRSTMVGD----------DVDRPLLKSDGSYTYF---AADLAYFKCKYERG- 348
               +   F+ +  GD          D  RP  + +   ++      DL+  +  ++ G 
Sbjct: 160 AGGEENWFFKLSEFGDKLLAFYEENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGV 219

Query: 349 ---FD--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
              FD  ++ YV                 G     +  R       V +   + + ++  
Sbjct: 220 PLPFDEGHVAYVWADALLAYLTGIGYGDEGERAGEFDARWPMQYHFVGKDITRFHCVIWP 279

Query: 388 LVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            + +                     KMSK  G+ +    +    G D+ R+  + 
Sbjct: 280 AMLMAAGLPITHTVFGHGFLLTKGEKMSKSKGNALKPADLCKVFGVDAYRYYFMS 334


>gi|126724364|ref|ZP_01740207.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126705528|gb|EBA04618.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 865

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   +G+   +    K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 32  AKWQAAWDKAGVFQAKATSDKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKMSTG 90

Query: 159 YEV 161
           + V
Sbjct: 91  HNV 93


>gi|330718099|ref|ZP_08312699.1| glutamyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 499

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 94/300 (31%), Gaps = 38/300 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE-------YYINDAGAQINTLA-LS 180
           + +PTG +H+G+ R A+     A    ++G  + R           +   +Q++ L  L 
Sbjct: 10  APSPTGHLHIGNARTAIFNWLFAR--HYNGKFIIRIEDTDQKRNIADGETSQLDNLKWLG 67

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           + W              +       +     E   +      ++   + L   ++    A
Sbjct: 68  LDWDEAPDFSGEYGPYRQSERNEQGIYQEYIEALLEKGLAYKSYKTSEQLAAEREAQQAA 127

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTT 299
                             ++ E   + G  +  R+    +   QG         P+ K  
Sbjct: 128 KQA-------------PHYVYE---YEGLSNAEREAKYADFEAQGLKPVVRFRVPEDKVY 171

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ +  +   +  VG   D  + K+DG  TY   + A     +     +++   G D
Sbjct: 172 AWDDIVKGHIEIGAKEVG--GDWVIQKADGMPTY---NFAVVVDDHLMAISHVLR--GDD 224

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H     +   +  A+     +       +  +       K+SKR  D +       E+G 
Sbjct: 225 HVSNTPKQMMIYEALGWAIPKFGH----MALIINGATGKKLSKRDEDVLQFVEQYRELGY 280


>gi|315657010|ref|ZP_07909895.1| valyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492402|gb|EFU82008.1| valyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 885

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 18/124 (14%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++  SD+VR+     +      FD  ++K   +      
Sbjct: 593 DPDHKKMSKSKGNVVTPMALLEKHSSDAVRYWAASARLGTDAAFDEGEMKVGRRL----- 647

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +  + A  +  D D  L P  V  +          LI  LA    VI +AT
Sbjct: 648 ----AIKLLNASKFALSMGGDADLVLDPALVTVEVD------RSLIATLA---EVIASAT 694

Query: 514 IAQE 517
            A E
Sbjct: 695 KAFE 698


>gi|296282118|ref|ZP_06860116.1| leucyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 841

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 25/171 (14%)

Query: 360 HSGYVKRLEAVAAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           H  Y +R       V     +I       +L E       G  +KMSK   + +    ++
Sbjct: 573 HETYFRREPDSGRMVYFAPEEITRDAKSAVLKEDGFPVSVGRVVKMSKSKRNVVDPDTII 632

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            + G+D+VR+ ML     E    D     E   E    +VQ        ++R   +  P 
Sbjct: 633 AQYGADAVRWFMLSDSPPER---DLPW-SESGIEGCARFVQ-------RVWRLVGEHDPA 681

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN------ATIAQEPY 519
              +          S  D +E    +H   + + +        A    EP 
Sbjct: 682 AQGEDADLARKTARSVHDVAETIEALH---FNKAVAKLYELVGALEKAEPS 729



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS               +  +      K  +  +   P+G +H+GH R   +GD LA
Sbjct: 5   RFDPSSADGRWQKAWDEAECFRADSASDRPKSYVLEMFPYPSGRIHIGHVRNYTMGDVLA 64

Query: 152 SLMAFSGYEV 161
              A  G+EV
Sbjct: 65  RYKAMRGHEV 74


>gi|289704778|ref|ZP_06501199.1| methionine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558494|gb|EFD51764.1| methionine--tRNA ligase [Micrococcus luteus SK58]
          Length = 541

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 100/344 (29%), Gaps = 60/344 (17%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A        +    
Sbjct: 17  PNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKMEQTAQQQGVSALELATR 76

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           N +   E       +  +     D++         E    I +   ++A   I       
Sbjct: 77  NAAVFRE---MDDDVLDIS---YDRFIRTTDTDHAEAVREIWRR--MEANGDIYLGSYAG 128

Query: 252 LN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
              ++ + +  ED+   G    +R  ++      +  E       SK  Q   +D  +  
Sbjct: 129 WYSVRDERYFGEDETEVGQDG-VRRAVETGTEVTWTEEESYFFRLSKYQQPL-LDHYREH 186

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD-----------------NMI 353
                     +  +   +        DL+  +  ++ G D                 ++ 
Sbjct: 187 PDFAAPRYRFNEVIRFVEAG----LEDLSISRTSFQWGIDLPAPADPDAADADRRADHVT 242

Query: 354 YVM---------GSDH--------------SGYV-----KRLEAVAAAVSEKKAQINVLL 385
           YV          G+                  +V      R   +        A + +  
Sbjct: 243 YVWVDALTNYLTGAGWPAEDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLELPR 302

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             ++  + +    KMSK  G+ +  R  V   G D++RF +L  
Sbjct: 303 RVMIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLRE 346


>gi|260459773|ref|ZP_05808027.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034575|gb|EEW35832.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 927

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 27/163 (16%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +++     P +  +++         G +                 L   ST+   D    
Sbjct: 463 EYYLALEGPWKAWVEDKLENYK--PGEILTRDEDVLDTWFSS--ALWPFSTLGWPDQTPE 518

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L       TY+  D+         GFD +I+         V R+  +     +++     
Sbjct: 519 LK------TYYQTDV------LVTGFD-LIFFW-------VARMMMMGLHFMDEEP---F 555

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
               +  L RD    KMSK  G+ +    ++DE G+D++RF +
Sbjct: 556 HTVYMHALVRDKNGQKMSKSKGNVVDPLDLIDEYGADALRFTL 598


>gi|188585176|ref|YP_001916721.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229559953|sp|B2A6C2|SYL_NATTJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|179349863|gb|ACB84133.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 826

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +           I Y   +     K  +  +   P+G +H+GH R   +GD LA   
Sbjct: 6   PQKIESKWQKRWQDEISYETEVDHNKDKYYVLEMFPYPSGKLHMGHMRVYSIGDVLARFQ 65

Query: 155 AFSGYEV 161
              GY V
Sbjct: 66  RMRGYNV 72


>gi|157879483|pdb|1OBC|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Post-Transfer Editing Substrate Analogue
          Length = 814

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +                  +     V + F    P+G +H+GH +   +GD LA  
Sbjct: 5   NPHAIEAKWQRFWEEKGFMKAKDLPGKQYVLVMF--PYPSGDLHMGHLKNYTMGDVLARF 62

Query: 154 MAFSGYEV 161
               GYEV
Sbjct: 63  RRMQGYEV 70


>gi|119961299|ref|YP_948111.1| valyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119948158|gb|ABM07069.1| putative valyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 873

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 59/190 (31%), Gaps = 33/190 (17%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    V++E GSD+VR+     K      ++  ++K          
Sbjct: 589 DPDRKKMSKSKGNVVVPTDVLNEYGSDAVRYWAASAKLGADTAYEIAQMKIGR------- 641

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 R       A     +L                +  +  L   LA+   V+  +T
Sbjct: 642 ------RLAIKLLNASKFVLNLGATENSVVTSDLSVLTNPLDRAL---LAQLSDVVAQST 692

Query: 514 IAQEPYKLAFY----LYDLASVFHGHW---SHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            A E      Y       +   F   W       E  + R   A         L    A+
Sbjct: 693 KAFE-----NYDYARALQITESF--FWQFTDDYVELIKDRAYGAAGEAEQASVLA---AL 742

Query: 567 ASIINSGLNI 576
           A+ ++S L +
Sbjct: 743 ATTLDSLLRL 752


>gi|83941787|ref|ZP_00954249.1| leucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83847607|gb|EAP85482.1| leucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 848

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  ++   + + +      K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  ARWQAAWEKNDVFHAVRNADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKIATG 69

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           + V      +  G      A+++    +   Y N +D+
Sbjct: 70  HNVLHPMGWDAFGMPAENAAMAIGGHPKDWTYGNIADM 107


>gi|332291814|ref|YP_004430423.1| glutamyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169900|gb|AEE19155.1| glutamyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 505

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 95/282 (33%), Gaps = 28/282 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTGP+H+G  R A+     A      G  + R   I D            + R    
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAK--KHGGTFILR---IEDTDQNRYVPGAEDYIRESLD 64

Query: 188 --ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
              +  ++    +G + G Y +   K+    ++  L++     +      +     +   
Sbjct: 65  WCGISYDEGPTKDGGF-GPYRQSERKDKYHAFAKALVDSNNAYY-----AFDTAESLDAH 118

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           R D +A      I+   +     +   + ++  +     G  Y      P+ +  Q  D 
Sbjct: 119 RKDHEANGKTF-IYNWHNRLKLDNSLVLSQEETEKRIAAGENYVIRFKSPQDEVLQLRDE 177

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R  +   + ++    D+ L KSDG  TY    LA     +     ++I   G +    +
Sbjct: 178 IRGAMEIDTNILD---DKVLFKSDGMPTYH---LANIVDDHLMEITHVIR--GEEWLPSL 229

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                +  A          L   L  + +     K+SKR GD
Sbjct: 230 ALHVLLYRAFGWDAPVFAHLPLILKPVGKG----KLSKRDGD 267


>gi|293363815|ref|ZP_06610555.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552620|gb|EFF41390.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 830

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 76/241 (31%), Gaps = 39/241 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
                +I     N TG +H+GH    ++ DT+       G++           + ++   
Sbjct: 31  NKKPFSILLPPPNVTGKLHLGHAFDTMIPDTIIRYKKLKGFDTF-------WISGMDHAG 83

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           ++   +                        V  +L +       +   EK+L +V D+  
Sbjct: 84  IATQAK------------------------VEADLYETKGLTKHDLGREKFLDLVWDWK- 118

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS-- 296
           +    + R+    L +  D         +     +  I  +   +G +Y+ +        
Sbjct: 119 EKYATMFREQWAKLGLALDYENERFTLDKDANEAVLKIFVDFYNKGLIYKDVKAINWDTK 178

Query: 297 -----KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                   +  + +  Q+++      ++ D+ L  +        +D+A      ++ + +
Sbjct: 179 LKTAVSNIEINNTETNQIMYYIKYFIENSDQYLTIATVRTETLLSDVAVVYNPSDKRYSH 238

Query: 352 M 352
           +
Sbjct: 239 L 239


>gi|218131359|ref|ZP_03460163.1| hypothetical protein BACEGG_02974 [Bacteroides eggerthii DSM 20697]
 gi|217986291|gb|EEC52628.1| hypothetical protein BACEGG_02974 [Bacteroides eggerthii DSM 20697]
          Length = 508

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL+  +  ++       + A    I   
Sbjct: 68  GIPFDEGVSFGGEHGPYRQSERREIYKKYVQVLLDAGK-AYIAFDTPEELDAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L  +G  Y         +     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLSKEEVDALIAEGRQYVVRFKIEPDENVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|126735650|ref|ZP_01751395.1| glutamyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714837|gb|EBA11703.1| glutamyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 464

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 14/122 (11%)

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           I  P   KTT   ++        S    DD+   LL+SDG+  Y    LA     ++ G 
Sbjct: 142 IKAPRDGKTTLHDEVQGDVTW--SNDQLDDM--ILLRSDGTPVYM---LAVVVDDHDMGV 194

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I   G DH     R   +  A+   K  +       + L       K+SKR G    
Sbjct: 195 THVIR--GDDHLANAFRQNLIYDAMGWDKPTLAH-----IPLIFGPDGKKLSKRHGATGA 247

Query: 410 LR 411
             
Sbjct: 248 AE 249


>gi|153951097|ref|YP_001397796.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166231594|sp|A7H2R6|SYL_CAMJD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152938543|gb|ABS43284.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 809

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S + K    I      +         K  I  +   P+G +H+GH R   +GD LA   
Sbjct: 5   ASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYY 64

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 65  RKIGFNV 71



 Score = 37.2 bits (85), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 20/142 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDF 407
           Y+ G +H+     Y +  +     +         + LL + + L +DG   KMSK  G+ 
Sbjct: 531 YIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRLLTQGMVL-KDGA--KMSKSKGNV 587

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    ++++ G+D+ R  ML+       + ++     +           AY     ++ +
Sbjct: 588 VDPDEIIEKYGADTARLFMLFAAPP-AKELEWNDDAVEG----------AYRFICKLYDR 636

Query: 468 AKDIFPDLDFDLFPRNVIPQES 489
           A++I      +L   N+  +E 
Sbjct: 637 AQNIKKGELVELKQENLNKEEK 658


>gi|260435959|ref|ZP_05789929.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413833|gb|EEX07129.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 875

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 92  YLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P+ L +         G++    +  K     +      P+G +H+GH R  V+ D +
Sbjct: 22  RYDPTTLEQRWQESWKADGVDTTEEVAEKPGFFALSMF-PYPSGSLHMGHVRNYVITDVI 80

Query: 151 ASLMAFSGY 159
           A +    G+
Sbjct: 81  ARVQRMRGH 89


>gi|255536397|ref|YP_003096768.1| Valyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342593|gb|ACU08706.1| Valyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 882

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 56/234 (23%), Gaps = 43/234 (18%)

Query: 91  LYLSPSYLR----------KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140
             L+  +++          +           Y  +   +     I     N TG +H+GH
Sbjct: 4   FRLTTDFMQLSDKYNPTETEQKWYSYWLENNYFHSEPNEKPPYTIVIPPPNVTGILHMGH 63

Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200
                + D L       G+               +  +++   +    L           
Sbjct: 64  MLNNTIQDVLVRRARMQGFNAC-------WVPGTDHASIATEAKVVAKLKEEGIS-KADI 115

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260
               +LKH   E  DKY   +L                          LK L    D   
Sbjct: 116 SREEFLKH-AWEWTDKYGGTILEQ------------------------LKKLGCSCDWAR 150

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
           +           +     +L  +G +Y G          +    D + +     
Sbjct: 151 TRFTMEPKLSQQVIKSFVDLYNKGLIYRGYRMVNWDPEAKTNISDEEVIFKEQN 204


>gi|167586813|ref|ZP_02379201.1| glutamyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 469

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 94/282 (33%), Gaps = 47/282 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G  V R   I D    +   +        + 
Sbjct: 10  APSPTGFIHLGNIRSALYPWAFAR--KMQGTFVLR---IED--TDVERSSPEAVDAILEG 62

Query: 189 LYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKII 245
           +   D D  EG +Y          +  D+Y   L    EE   +   +    + A+ +  
Sbjct: 63  MRWLDLDFDEGPFYQ--------MQRMDRYREVLAKMLEEGLAYPCYMSTEELDALRERQ 114

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCD 303
           R+    L  ++D         R +P  +      L     G         P + T    D
Sbjct: 115 RE--AGLKPRYDGTW------RPEPGKV------LPEPPAGVKPVLRFRNPLTGTVAWDD 160

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             + ++   +  +    D  + + DG+  Y   +        + G  ++I   G DH   
Sbjct: 161 AVKGRVEISNEELD---DLVIARPDGTPMY---NFCVVVDDLDMGITHVIR--GDDHVNN 212

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             R   +  A+  +     V +   +    +    KMSKR G
Sbjct: 213 TPRQINILRALGGE-----VPVYAHLPTVLNEQGEKMSKRHG 249


>gi|114764911|ref|ZP_01444084.1| valyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114542623|gb|EAU45647.1| valyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 1025

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 346 ERGFDNMIYVMGSDHSGYV--KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           ER F   + V G D   +    R+  +  AV ++    +V L  LV   RD    KMSK 
Sbjct: 620 ERYFPTSVLVTGQD-ILFFWVARMMMMQLAVVDEIPFRDVYLHGLV---RDAKGKKMSKS 675

Query: 404 AGDFITLRHVVDEVGSDSVRF 424
            G+ +    ++DE G+D++RF
Sbjct: 676 LGNVVDPLEIIDEYGADALRF 696



 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 60/228 (26%), Gaps = 44/228 (19%)

Query: 92  YLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
               +     +      +G         +     I     N TG +H+GH     + D L
Sbjct: 6   TFDAAAAEARIYEAWEKAGAFDAGANASRDESFCIMIPPPNVTGSLHMGHAFNNTLQDIL 65

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G++   +   + AG     +                               V 
Sbjct: 66  VRWHRMRGFDTLWQPGQDHAGIATQMV-------------------------------VE 94

Query: 211 KELA-DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH--- 266
           +ELA D  ++       E +   + ++  Q+   II   LK L    D   +        
Sbjct: 95  RELAKDASNATRREMGREAFTAKIWEWKQQSGGTIINQ-LKRLGASCDWSRNAFTMSGAE 153

Query: 267 ---RGDPSPIRDIIDN----LARQGYVYEGILPPPKSKTTQKCDMDRK 307
               G+     D +      +  +G +Y G          +    D +
Sbjct: 154 GAPAGEEGNFHDAVIKVFVDMYEKGLIYRGKRLVNWDPHFETAISDLE 201


>gi|90101541|sp|Q6LUW1|SYV_PHOPR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 953

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RAERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +++   L  +  +Y G               D +
Sbjct: 152 ATQEVFVRLFEEDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|320037741|gb|EFW19678.1| glutamyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 601

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 102/293 (34%), Gaps = 46/293 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ- 187
           + +PTG +H+G  R A+    LA      G  + R   I D   Q  T+  +    Y+  
Sbjct: 48  APSPTGYLHLGSLRTALFNYLLAK--RTGGQFLLR---IEDT-DQKRTIPGAEQRLYEDL 101

Query: 188 ---ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
               L  ++  +  G Y G Y +     L    +  L++       F   + L  +  + 
Sbjct: 102 QWAGLQWDEGPVVGGPY-GPYRQSERTALYKSQAENLISTGHAYRCFCSSERLDRLARHR 160

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFH--RGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               +    D         DI   E +     G+   +R  +   A    ++E I+    
Sbjct: 161 HDLGLAPGYD-----GACIDISKEESEERAANGEAHVVRLRV---AESYPMFEDIVYGKT 212

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +        + +L+         VD  LLKSDG  TY  A++       +  F  + +V
Sbjct: 213 GQNRAGNGGKKAELV------DTFVDPILLKSDGYPTYHLANV------VDDHFMKITHV 260

Query: 356 M-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           + G++         A+  A   +  +        V L  +    K+SKR  D 
Sbjct: 261 IRGTEWMSSTPMHVALYNAFQWQPPKFGH-----VPLLVEKNGQKLSKRNADI 308


>gi|260767228|ref|ZP_05876169.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617736|gb|EEX42914.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 858

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPQDIEQKVQEHWENNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|255527336|ref|ZP_05394214.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184931|ref|ZP_06853342.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508983|gb|EET85345.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050713|gb|EFG90136.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 882

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 64/237 (27%), Gaps = 33/237 (13%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P      L         +   +        I     N TG +H+GH     + D + 
Sbjct: 10  TYNPKEFEGKLYKNWEEKGYFTPKVDENKKPYTIVLPPPNITGKLHLGHALDDTIQDIII 69

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                    S  W   Q   +  +++            V  
Sbjct: 70  RTKRMQGY--------------------STLWLPGQDHASIATEVK-----------VEN 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           EL  K   +      E +L  V D++     + IR+ +K L    D              
Sbjct: 99  ELL-KQGLKKKEMGREAFLEKVWDWA-NEYRERIRNQVKQLGSSVDSTRECFTMEEKANK 156

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
            +R     L  +G +Y+G          Q    D +            +  P++ SD
Sbjct: 157 AVRTFFVKLYNEGLIYQGNRIINWCPKCQTAISDAEIEYSEQEGHFWHIKYPVVGSD 213


>gi|239831824|ref|ZP_04680153.1| valyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824091|gb|EEQ95659.1| valyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 910

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 101/321 (31%), Gaps = 41/321 (12%)

Query: 184 RYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            Y + + ++   +P G   GV    YL       A + +   +    +    IV     +
Sbjct: 356 GYLEKIEDHTHAVPHGDRGGVPIEPYLTDQWYVNAAELAKPAMAAVRDGTTQIVPKNWEK 415

Query: 240 AMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                + ++++   +   ++        +       +    +        + G     + 
Sbjct: 416 TYFDWM-ENIQPWCVSRQLWWGHQIPAWYGPDGKCFVEKSEEEAKASARAHYGEDVVLER 474

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            T          L   ST+   D    L       TY+   +         GFD +++  
Sbjct: 475 DTDVLDTWFSSALWPFSTLGWPDKTPEL------ATYYPTSV------LVTGFD-ILFFW 521

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                  V R+  +     E+     V L  LV   RD    KMSK  G+ I    ++DE
Sbjct: 522 -------VARMMMMGLHFMEEIPFHTVYLHALV---RDKHGAKMSKSKGNVIDPLELMDE 571

Query: 417 VGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            G+D++RF + +       +  D  ++                 +  +  R A+     L
Sbjct: 572 YGADALRFTLAIMAAQGRDVKLDPARIAGYRNFGT---------KLWNATRFAQMNGVKL 622

Query: 476 DFDLFPRNVIPQESEFDTSEL 496
           D    P N     + +  +EL
Sbjct: 623 DAGFKPENARLAVNRWILTEL 643


>gi|328672623|gb|AEB26870.1| arginyl-tRNA synthetase, degenerate [Anaplasma phagocytophilum HZ]
          Length = 57

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204
            GY+VT++YY+NDA +Q+ TL   VF RY++AL   +  +  G YPG 
Sbjct: 1   MGYDVTKKYYVNDAVSQVKTLVSPVFLRYKEALE-EEITIGAGLYPGE 47


>gi|326575588|gb|EGE25512.1| leucyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|326566006|gb|EGE16166.1| leucyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|301060390|ref|ZP_07201253.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300445586|gb|EFK09488.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 642

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 116/366 (31%), Gaps = 46/366 (12%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH    +V D L      +G++       ++ G +I   A     +  
Sbjct: 13  YVNAEP----HIGHAYTTIVADVLNRFHKLAGFDTFFLTGTDEHGDKI-VAAAENAGQTP 67

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +   +  S + +G +P + + +       + +           L +VK+       +   
Sbjct: 68  KQYTDRISAMFQGLWPRLNISNSAFI---RTTDAYHQETVRNILSLVKEKDDIYFSEY-- 122

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQK 301
           + L       + F +E +   G     +   D +    Y      Y+  L     K    
Sbjct: 123 EGLYCFG--CERFYTEKELVDGKCPDHQKEPDVIKEANYFFRMSRYQEWLIEHIKKNPSF 180

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSD-----GSYTYFAADLAYFKCKYERGFDNMIYVM 356
              +R +    S +     D  + +       G    F  D   +       FD +I  +
Sbjct: 181 IRPERYRNEVLSFLSEPLEDLCISRPKSRLKWGITLPFDEDFVTYVW-----FDALINYV 235

Query: 357 -------GSD--------HSGYVK---RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                  G+D             K   +   +      K A I       V  Y +    
Sbjct: 236 SALGYPEGADFQDFWPVAQHVIAKDILKPHGIYWPCMLKSAGIEPYQHLNVHGYWNIDAG 295

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +    +VD  G D  R+  L R+ +  LD +F +     + N         
Sbjct: 296 KMSKSIGNVVEPLELVDIYGLDPFRYF-LMREMAFGLDSEFSEDALVQRLNADLANDLGN 354

Query: 459 ARCRSI 464
              RS+
Sbjct: 355 LVSRSL 360


>gi|302770629|ref|XP_002968733.1| hypothetical protein SELMODRAFT_90336 [Selaginella moellendorffii]
 gi|300163238|gb|EFJ29849.1| hypothetical protein SELMODRAFT_90336 [Selaginella moellendorffii]
          Length = 544

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 13/66 (19%)

Query: 45  LSTNAAMILSRPLGLD-------------PLTIAELIVARIKIDPDVDSVFIAGKGFINL 91
            ++NAA +++  L                P  +A  + A++        V  A KG +N 
Sbjct: 208 YTSNAAFLVASALKKRRNLDGGQLAMEVVPADLASQLAAKLSAKQLSGVVVKACKGHVNF 267

Query: 92  YLSPSY 97
           YLS S 
Sbjct: 268 YLSSSA 273


>gi|262401794|ref|ZP_06078359.1| valyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351766|gb|EEZ00897.1| valyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|256846013|ref|ZP_05551471.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719572|gb|EEU33127.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 859

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWSKDNIFKTENEVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|189424047|ref|YP_001951224.1| isoleucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420306|gb|ACD94704.1| isoleucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 924

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 38/191 (19%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+ GSD   G+      +  +V  +      +VL    V    DG   KMSK  G+ + 
Sbjct: 557 LYLEGSDQHRGWFHSS--LLESVGTRGVAPYKSVLTHGFV---LDGQGRKMSKSMGNVVA 611

Query: 410 LRHVVDEVGSDSVRF---MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
              V+ + G+D +R       +R ++ + +    +V E            AY R R+  R
Sbjct: 612 PEDVIKKFGADVLRLWCSAQDYRDDNRISEEILNRVAE------------AYRRIRNTCR 659

Query: 467 QAKDIFPDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
                  D D   D      +          L+L+         +  A    E + +  Y
Sbjct: 660 FMLGNLNDFDPATDSVAFADLMPIDRLALHHLELLK------ERVLAAYTEFEFHVI--Y 711

Query: 525 LYDLASVFHGH 535
                   +  
Sbjct: 712 -----QAINSF 717


>gi|3219294|dbj|BAA28841.1| Valyl tRNA Synthetase [Trichomonas vaginalis]
          Length = 455

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     S   +   +      K   + +     N TG +H+GH   A + D +   
Sbjct: 54  NPMKVENAWYSWWENQNFFEPKAADKKFVMIL--PPPNVTGELHLGHALTASIEDAITRY 111

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E       + AG       ++  +R ++ +Y+    L  G Y   Y      + 
Sbjct: 112 HRMCGEESLWVPGTDHAG-------IATQFRVEKKIYDEK-KLHRGEYSREYFLEEAHKW 163

Query: 214 AD 215
            +
Sbjct: 164 VE 165


>gi|119386425|ref|YP_917480.1| glutamyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|187645686|sp|A1B8E0|SYE2_PARDP RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|119377020|gb|ABL71784.1| glutamyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 468

 Score = 42.6 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 17/109 (15%)

Query: 306 RKQLLFRSTMVGDDV-------DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
             + + R  + GD         D  LL+SDG+ TY    LA     ++ G  ++I   G 
Sbjct: 151 DGETVVRDAVQGDVTFGNAQLDDMVLLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GD 205

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           DH     R   +  A+        + +   + L       K+SKR G  
Sbjct: 206 DHLTNAARQIQIYQAMGWD-----IPVFAHIPLIHGTDGKKLSKRHGAV 249


>gi|320535808|ref|ZP_08035889.1| glutamyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147356|gb|EFW38891.1| glutamyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 506

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 100/286 (34%), Gaps = 45/286 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  H+G  R A+     A     +G +      I D               Y++ 
Sbjct: 8   APSPTGFQHIGGVRTALFNYLFAR---STGGKFILR--IEDTDR------TRYSAEYEEN 56

Query: 189 LYNNDSDLPEG--------YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           LY+  + L              G Y++    E   KY+ EL+   +  +        ++ 
Sbjct: 57  LYDTLAWLGIDWDEGGPKGGPYGPYIQSHCFENYKKYAEELVKNGK-AYYCFCDSERLER 115

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + KI    +  +   +D                 +I +NLA +   Y   L  P   +T+
Sbjct: 116 IRKIQ--TMNKMPPGYDRCCR--------SLTDEEIKENLAAKKP-YVIRLKVPLEGSTR 164

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS-D 359
             D+    + +++  +    D  LLKSDG  TY  A++       +  F  + +VM + +
Sbjct: 165 FHDVLLGDIEWKNEDINP--DPVLLKSDGFPTYHLANI------IDDHFMKITHVMRAQE 216

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                     + AA   +  Q   L   +          K+SKR G
Sbjct: 217 WIPSTPMHIILYAAFGWQPPQFCHLPMVMGNDG-----QKLSKRHG 257


>gi|302817893|ref|XP_002990621.1| hypothetical protein SELMODRAFT_448122 [Selaginella moellendorffii]
 gi|300141543|gb|EFJ08253.1| hypothetical protein SELMODRAFT_448122 [Selaginella moellendorffii]
          Length = 414

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 30/121 (24%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVI---------ERPRDCAHGH--------LSTNA 49
            S+ L + LK       V+  +     +         E+ R               ++NA
Sbjct: 10  VSAALVDSLKAAIRDWMVDAGVGSDFQVPDVGVRRISEKVRQKLQEDSTSEWEASYTSNA 69

Query: 50  AMILSRPLGLD-------------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96
           A +++  L                P  +A  + A++        V  A KG +N YLS S
Sbjct: 70  AFLVASALKKRRNLDGGQLAMEVVPADLASQLAAKLSAQQLSGVVVKACKGHVNFYLSSS 129

Query: 97  Y 97
            
Sbjct: 130 A 130


>gi|297581350|ref|ZP_06943273.1| valyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297534188|gb|EFH73026.1| valyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|296113510|ref|YP_003627448.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921204|gb|ADG61555.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326572403|gb|EGE22395.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|260495228|ref|ZP_05815356.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197285|gb|EEW94804.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 859

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWSKDNIFKTENEVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|254730401|ref|ZP_05188979.1| glutamyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260758106|ref|ZP_05870454.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 4 str. 292]
 gi|260668424|gb|EEX55364.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 4 str. 292]
          Length = 473

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 50/302 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VR 423
            R
Sbjct: 253 YR 254


>gi|269123133|ref|YP_003305710.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314459|gb|ACZ00833.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 865

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 37/157 (23%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y++    +K       + +    N +          + A P+G +H GH R   +GD +A
Sbjct: 5   YIAKEVEQKWQEIWEKNKVFKTENKVKGKENYYTLEMFAYPSGKLHAGHLRNYTIGDAIA 64

Query: 152 S--------LMAFSGYE------------------VTREYYINDAGAQINTLALSVFWRY 185
                    ++   G++                  +     I +   Q+  + LS  W  
Sbjct: 65  RYKKMKGFNVLHTFGWDSFGLPAENAAIDNGASPAIWTAQNIGNMKRQLKLMGLSYDW-- 122

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
                  D +L    Y   Y K   K   + Y   L+
Sbjct: 123 -------DRELAT--YKKEYYKFNQKFFIEMYKKGLV 150


>gi|229521568|ref|ZP_04410986.1| valyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229341162|gb|EEO06166.1| valyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|194334514|ref|YP_002016374.1| isoleucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312332|gb|ACF46727.1| isoleucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 1080

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +K A  N+++   +    D   +KMSK  G+ +     ++
Sbjct: 582 GVDQTRGWFYTLHAIATLIFDKPAYRNLVVNGHI---LDKEGLKMSKSKGNVVDPFETIN 638

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK-------ENPVFYVQYA 457
             G+D++R+ ++          F+  +++E+ +        +  F+V YA
Sbjct: 639 RYGADALRWYLIVTSPPWRPKSFNVEEIEEEQRRFFRAYVNSYNFFVMYA 688


>gi|325833648|ref|ZP_08166097.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325485572|gb|EGC88041.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 529

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 103/355 (29%), Gaps = 87/355 (24%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +  DT+A     +GY+V     +++ G ++   A       Q
Sbjct: 14  YVNAAP----HLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMTPQ 69

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW---LPIVKDYSVQAMMK 243
               + +             +     L   Y+  +               +D   +    
Sbjct: 70  DWCDSMEPAF----------RDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWC- 118

Query: 244 IIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +   +    +  + + +E D  + D                  EG L  P  K   + 
Sbjct: 119 -YKGSYEGWYCVHEETYYAESDLEKND------------------EGELVCPDCKRPVQK 159

Query: 303 DMDRKQLLFRSTMVGD----------DVDRPLLKSDGSYTYF---AADLAYFKCKYERG- 348
               +   F+ +  GD          D  RP  + +   ++      DL+  +  ++ G 
Sbjct: 160 AGGEENWFFKLSEFGDKLLAFYEENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGV 219

Query: 349 ---FD--NMIYVM----------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
              FD  ++ YV                 G     +  R       V +   + + ++  
Sbjct: 220 PLPFDEGHVAYVWADALLAYLTGIGYGDEGERAGEFDARWPMQYHFVGKDITRFHCVIWP 279

Query: 388 LVRLYRDG--------------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            + +                     KMSK  G+ +    +    G D+ R+  + 
Sbjct: 280 AMLMAAGLPITHTVFGHGFLLTKGEKMSKSKGNALKPADLCKVFGVDAYRYYFMS 334


>gi|317490262|ref|ZP_07948750.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910756|gb|EFV32377.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 529

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 100/341 (29%), Gaps = 59/341 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +  DT+A     +GY+V     +++ G ++   A       Q
Sbjct: 14  YVNAAP----HLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMTPQ 69

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW---LPIVKDYSVQAMMK 243
               + +             +     L   Y+  +               +D   +    
Sbjct: 70  DWCDSMEPAF----------RDAWDMLGITYTDFVRTTEPRHARTVQKFWQDLYDRGWC- 118

Query: 244 IIRDDLKALN-IQHDIFISEDDFHRGDPSPI---------------RDIIDNLARQGY-- 285
             +   +    +  + + +E D  + +   +                +    L+  G   
Sbjct: 119 -YKGSYEGWYCVHEETYYAESDLEKNEDGELVCPDCKRPVQKAGGEENWFFKLSEFGDKL 177

Query: 286 --VYE---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--L 338
              YE     + P   K      +         +    D   PL   +G   Y  AD  L
Sbjct: 178 LAFYEENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALL 237

Query: 339 AYFK-----CKYER--GFD---NMIY-VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           AY        + ER   FD    M Y  +G D    + R   V        A + +    
Sbjct: 238 AYLTGIGYGDEGERAGEFDARWPMQYHFVGKD----ITRFHCVIWPAMLMAAGLPITHTV 293

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               +      KMSK  G+ +    +    G D+ R+  + 
Sbjct: 294 FGHGFLLTKGEKMSKSKGNALKPADLCKVFGVDAYRYYFMS 334


>gi|315645722|ref|ZP_07898846.1| hypothetical protein PVOR_09600 [Paenibacillus vortex V453]
 gi|315279200|gb|EFU42510.1| hypothetical protein PVOR_09600 [Paenibacillus vortex V453]
          Length = 87

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 6/49 (12%)

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV------MGSDHSG 362
           +D+ L++S+G  TY A D+AY   KY    ++ +Y       +  +HSG
Sbjct: 39  MDKVLVRSNGILTYTAKDIAYHLWKYGLLSNDFVYTKFDRRCLDHEHSG 87


>gi|304413755|ref|ZP_07395199.1| valyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283846|gb|EFL92240.1| valyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 959

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 54/196 (27%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +         I     N TG +H+GH     + D L   
Sbjct: 13  NPQKIEQPLYQHWEKQGYFKASDDKSQESFCIMIPPPNVTGSLHMGHAFQQTIMDILIRY 72

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 73  QRMQGKNTLWQVGTDHAGIATQMV-------------------------------VERKI 101

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      ++  E ++  +  +   +    I   ++ L    D          G  + +
Sbjct: 102 TAEEGKTRHDYGREAFIDKIWQWKAASG-DTITHQMRRLGNSVDWQRERFTLDEGLSNAV 160

Query: 274 RDIIDNLARQGYVYEG 289
            ++   L ++  +Y G
Sbjct: 161 TEVFIRLYKEDLIYRG 176


>gi|126725111|ref|ZP_01740954.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706275|gb|EBA05365.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 1014

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L  LV   RD    KMSK  G+ I    ++DE G+D++
Sbjct: 629 WVARMMMMQIAVVDEIPFDTVYLHGLV---RDAKGKKMSKSTGNVIDPLDIIDEFGADAL 685

Query: 423 RF 424
           RF
Sbjct: 686 RF 687


>gi|3219292|dbj|BAA28840.1| Valyl tRNA Synthetase [Trichomonas vaginalis]
          Length = 455

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     S   +   +      K   + +     N TG +H+GH   A + D +   
Sbjct: 54  NPMKVENAWYSWWENQNFFEPKAADKKFVMIL--PPPNVTGELHLGHALTASIEDAITRY 111

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G E       + AG       ++  +R ++ +Y+    L  G Y   Y      + 
Sbjct: 112 HRMCGEESLWVPGTDHAG-------IATQFRVEKKIYDEK-KLHRGEYSREYFLEEAHKW 163

Query: 214 AD 215
            +
Sbjct: 164 VE 165


>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|187629846|sp|A0L4P8|SYC_MAGSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 490

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 63/415 (15%), Positives = 130/415 (31%), Gaps = 74/415 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  VV D +A  +  +G+++T   Y+         +   +  R  +         
Sbjct: 45  HIGHARVMVVFDVIARHLRVTGFDLT---YV----RNFTDIDDKIIKRANE--------- 88

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                 G  ++ + +   D +  ++     +   +       +  MM++I   L    + 
Sbjct: 89  -----RGESIQTLTQRYIDAFHQDMAALGVQPADIEPKATEHLPEMMQMI-GTLMDKGVA 142

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LL 310
           +                +   ++  A  G +   +L   ++    + D +++      L 
Sbjct: 143 Y-----------ASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSNKQNPMDFVLW 191

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVK 365
             +       D P     G   +     A         FD  I+  G D     H   + 
Sbjct: 192 KGAKPEEPQWDSPW--GAGRPGWHIECSAMGTKYLGASFD--IHGGGRDLIFPHHENEIA 247

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + E       +      +    +  +  +G   KMSK  G+F T+R ++     + +RF 
Sbjct: 248 QTEGCT---GQHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLALYPGEVLRFF 304

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNV 484
           +L       LDF F  ++                R  +  R A+ +   L    +     
Sbjct: 305 ILNSHYRSPLDFSFSLLEAAKAG---------LDRIYTALRSAQALLGKLPGTPIGEPAD 355

Query: 485 IPQESEFDTSELQLIVHLAEY--PRVIE---NATIAQ--------EPYKLAFYLY 526
           +P  +  D  E  L     ++  P+ I     A            +P  +A +  
Sbjct: 356 VPAGAPQDLVENYLKAMDDDFNTPQAIAFLFEAAKMLNTAISEQKDPAVIATWAR 410


>gi|326568501|gb|EGE18573.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|326568083|gb|EGE18167.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|295695843|ref|YP_003589081.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411445|gb|ADG05937.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 829

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    +G+   R    +     +E     P+G +H+GH R   +GD +A +    GY
Sbjct: 23  KWQNLWEETGLYRTREDANRPHYYCLEMF-PYPSGKLHMGHVRVYSIGDVVARVKRMQGY 81

Query: 160 EV 161
            V
Sbjct: 82  NV 83


>gi|257784424|ref|YP_003179641.1| valyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472931|gb|ACV51050.1| valyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 895

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 110/362 (30%), Gaps = 39/362 (10%)

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           ++  +E    +VKD  V    K               +        G   P+    D   
Sbjct: 365 VDKLKEPAAQVVKDGQVAFHPKRWTQTYLTWMENLRDWNISRQLWWGHRIPVFYCDDCGW 424

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG-SYTYFAADLAY 340
           +   + +  + P         D D     F S +            D     +    L  
Sbjct: 425 QDALMEDTDVCPKCGGHHVHQDEDVLDTWFSSQLWTFATQGWPNHPDQLEGHHPTQVLVT 484

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
            +         MI       S Y             K+   + +      L +DG   +M
Sbjct: 485 ARDIIALWVARMIM-----SSLYFT-----------KEIPFHDVYIYATILAKDG--SRM 526

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           SK  G+ +    ++ + G+D++R+ +L    N++ + FD    K+  +         A +
Sbjct: 527 SKSKGNGVDPMDLIAKYGADAMRYNLLTLITNNQDVKFDAVLDKKTRELVESPRTDQARS 586

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
               I       F  ++ D +   +   E+  D          +   +V+   T   E Y
Sbjct: 587 FVTKI--WNASRFVQMNLDGYTAGMPKAETPEDAW------MFSRLAKVVAETTEQLETY 638

Query: 520 KLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575
               Y  ++   F   W+       E  + R +     +    RLQ+   +  +++  + 
Sbjct: 639 GFGEYARNI-QSF--FWNDVCDWYIELCKGRLLDGTPEE----RLQVQRNLVFVLDVSMR 691

Query: 576 II 577
           ++
Sbjct: 692 LL 693


>gi|192293220|ref|YP_001993825.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192286969|gb|ACF03350.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 1004

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 24/179 (13%)

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-LLFRSTMVGDDVDRPLLKSDGSYT 332
            +I++    + ++ EG          ++   +R      +   + D        S  ++ 
Sbjct: 544 DEIVNQRIAEAFMQEGADAWYAEGAAERFLGERAAEGWQKVDDILD----VWFDSGSTHA 599

Query: 333 YFAAD------LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVL 384
           +   D      LA  + K + G D ++Y+ GSD   G+      +  +   + +A  +V+
Sbjct: 600 FVLEDAQNFPGLAGIRRKVDGGADTVMYLEGSDQHRGWFHSS--LLESCGTRGRAPYDVV 657

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLD 436
           L     L   G   KMSK  G+      V+   G+D +R       +    R   E+L 
Sbjct: 658 LTHGFTLDEQGR--KMSKSLGNTTDPAKVIASSGADILRLWVCATDYADDQRIGPEILK 714


>gi|160888421|ref|ZP_02069424.1| hypothetical protein BACUNI_00838 [Bacteroides uniformis ATCC 8492]
 gi|156862098|gb|EDO55529.1| hypothetical protein BACUNI_00838 [Bacteroides uniformis ATCC 8492]
          Length = 508

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDFIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL   +  ++       ++A    I   
Sbjct: 68  GIPFDEGVSFGGDHGPYRQSERREIYKKYVQILLEAGK-AYIAFDTPEELEAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L   G  Y        ++     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLPKEEVDALIAAGKQYVVRFKIEPNEDVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|139438524|ref|ZP_01772040.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
           25986]
 gi|133776063|gb|EBA39883.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
           25986]
          Length = 488

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 31/199 (15%)

Query: 269 DPSPIRDIIDNLARQGY--------VYEGILPPPKSKTTQKCDMDR---KQLLFRSTMVG 317
           +  P+  +I  L  QG+        VY  +   P        ++D       +  +    
Sbjct: 116 EIGPMIAMIKTLIEQGHAYAADNGDVYFAVRSDPNYGQVSGRNIDDLMVGARIEENEDKN 175

Query: 318 DDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           D +D  L K+             +G   +   + A    +Y       I + G       
Sbjct: 176 DPLDFALWKAAKPGEPSWPSPWGEGRPGWHT-ECAAMVHRY---LGTPIDIHGGGSDLAF 231

Query: 365 KRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              E   A A        +        L  DG   KMSK  G+F TL  V+++  + ++R
Sbjct: 232 PHHENECAQATCAWHQGFSNTWMHTGMLLVDGE--KMSKSLGNFFTLAEVLEQHSAAALR 289

Query: 424 FMMLWRKNSELLDFDFCKV 442
            +ML       LDF + ++
Sbjct: 290 LLMLQTSYRSPLDFSWERL 308


>gi|326572553|gb|EGE22542.1| leucyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|326565043|gb|EGE15243.1| leucyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326574150|gb|EGE24098.1| leucyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|326559370|gb|EGE09795.1| leucyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|295425123|ref|ZP_06817828.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065182|gb|EFG56085.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 927

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 78/230 (33%), Gaps = 37/230 (16%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
            +  + EG             + D   + F S   G      + K DG   +F ADL   
Sbjct: 499 AKELLPEGFTSEHSPNGEYTKEKDILDVWFDS---GTSWAGVMRKRDG--LHFPADL--- 550

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                       Y+ GSD   G+       + A +       VL    V    D    KM
Sbjct: 551 ------------YLEGSDQYRGWFNSSLITSVATTGLAPYKQVLSQGFV---LDDKGHKM 595

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+ I+   V+ ++G++ +R  +     S  +   +  + + ++         +Y +
Sbjct: 596 SKSLGNVISPNDVIKKMGAEIIRLWVAQADTSSDVAVSYDILSQSAE---------SYRK 646

Query: 461 CRSIFRQAKDIFPDLDFD---LFPRNVIPQESEFDTSELQLIV-HLAEYP 506
            R+ FR       D D +   +   ++   +   +     LI   LA Y 
Sbjct: 647 IRNTFRYMLANTSDFDPEKNRIAYEDLRSVDQYMEVKLNDLIRDCLAAYD 696


>gi|262166533|ref|ZP_06034270.1| valyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026249|gb|EEY44917.1| valyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 956

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|261415109|ref|YP_003248792.1| valyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371565|gb|ACX74310.1| valyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302328056|gb|ADL27257.1| valine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 920

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +            ++  +  GKG   ++     N TG +H+GH     + D L 
Sbjct: 6   RYNPKIVEDRWHDQWNKNNDFAPS--GKGEPFSVVIPPPNVTGALHLGHALNDTLQDILV 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G +       + AG       ++     ++ L+ ++                  
Sbjct: 64  RYRRKTGRDTLWIPGTDHAG-------IATQAVVEKRLFQDEH----------------- 99

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                      +   +  +  +  +  +   +I +  LK+L +  D              
Sbjct: 100 -------KTRHDIGRDALVERIWKWKDEYEARITKQ-LKSLGVSCDWSRQRFTLDPVCAK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R    NL ++G +Y G          Q    D +
Sbjct: 152 AVRHAFFNLFKKGLIYRGKRLVNWDTKLQTAVADDE 187


>gi|269928561|ref|YP_003320882.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787918|gb|ACZ40060.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 525

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 159/494 (32%), Gaps = 70/494 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV-----TREYYINDA------ 170
             +I +V+A P    H+GH    V+ D  A     +G +      T E  + +       
Sbjct: 12  TTSIPYVNAAP----HLGHALEYVLADAFARYHRLTGDDTRFLTGTDENSLTNVLAAERE 67

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G  +  L       +++     D    +        +H+  E A K         +    
Sbjct: 68  GIPVADLVDRNAEAFRRLTEYLDISNDDFIRTAAEPRHI--EGAQKLWEACARAGDIDKR 125

Query: 231 PIVKDYSVQAMMKIIRDDL-KALNIQHDI--FISEDDFHRGDPSPIRDII------DNLA 281
                Y V        ++    L  +H I   + E++ +    S  +D +      + L 
Sbjct: 126 YYSGLYCVLGEQFYTEEEAPDGLCPEHHIPLELVEEENYFFRLSRYQDALARAIDSEALR 185

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDVDRPLLKSDGSYTYFAA-- 336
                    +    ++  +   + R +   R     + GD      +  D    Y  A  
Sbjct: 186 IIPETRRNEVRAFIARGLEDVSISRTRARARGWGIPVPGDPDQVMYVWFDALANYITALG 245

Query: 337 ---DLAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              D   ++  +       ++V+G      H+ Y     A+  +  E      V+     
Sbjct: 246 YAHDADLYRRYWVENPHR-VHVIGKGILRFHAVY---WPAMLMSAGEPLPTTIVVHGY-- 299

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFCKVKEQSKE 448
            L   G   KMSK  G+ +    +    G+D+VR+ M+L    ++  D+   K++ +   
Sbjct: 300 -LTVGGE--KMSKSLGNVVDPAELTARYGADAVRYWMLLEVPPTQDADYTDEKLERRYNA 356

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508
           +    +     R  S+ R+ +         L P    P  ++ D   +      A  P  
Sbjct: 357 DLANDLGNLLNRTVSMIRRYR-------AGLVPAPGEPVTTDQDLEAVA-----ANLPGA 404

Query: 509 IENA-TIAQEPYK-LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL-----Q 561
           I  A     +P   LA  ++DL    + +          R  ++ +   T  RL      
Sbjct: 405 IAEAMGQNFDPQTALAA-IWDLVVRANRYVEETAPWSLARAERSGDAAAT-ARLDTALYH 462

Query: 562 LVHAVASIINSGLN 575
           L  A+  II   L 
Sbjct: 463 LAEALR-IIAQALR 475


>gi|161506926|ref|YP_001576880.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048174|sp|A8YTD3|SYC_LACH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160347915|gb|ABX26589.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 476

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 126/407 (30%), Gaps = 54/407 (13%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   + + +    E  + L+     + +          +H+G+ R ++  DT+   + + 
Sbjct: 2   LAVKVYNTLTRKKEEFKPLVPGQISMYV--CGPTVYNYIHIGNARSSIAFDTIRRYLEYK 59

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+V       D   ++   A +      +      +   E          +  E A  +
Sbjct: 60  GYKVKYVSNFTDVDDKMINEAHAEETTVPKLAEKFINAFLEDT------TALNIEPATLH 113

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                   E           + A ++ + D   A     D++     F           I
Sbjct: 114 PRATHEIKE-----------IIAFIQTLIDKGYAYESHGDVYYRAKKFKHYG-ELSDQNI 161

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFA 335
           + L                +  +K D     L  ++    D++  D P  K    +    
Sbjct: 162 ERLEEG-----ASEHINDEEQNRKEDPIDFALW-KAQKEPDEIAWDSPWGKGRPGWH--- 212

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV---LLCELVRLY 392
             +       +   D  I + G          E   A    K  +  V   L    V + 
Sbjct: 213 --IECSVMSTKYLGDT-IDIHGGGQDLEFPHHENEIAQSEAKTGKKFVNYWLHNGFVTVG 269

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK----- 447
           +D    KMSK   +F+T+  ++ EV    +RF M   +    +++    +++ +      
Sbjct: 270 KD--QEKMSKSLHNFVTVHDILKEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRF 327

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           +N +  + Y          + +D  P  D D   + +     +F+ +
Sbjct: 328 KNTLVNINY----------RLEDDTPSKDSDELAKAIAKTNEKFEVA 364


>gi|154246150|ref|YP_001417108.1| isoleucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154160235|gb|ABS67451.1| isoleucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 1012

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 34/170 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY+     Y+           L + W+ ++  
Sbjct: 76  PYANGNIHIGHALNKILKDVVTRSQQMLGYDS---NYVPGWDCH----GLPIEWKIEE-- 126

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---VQAMMKIIR 246
                                 +   K      +F +   +   +       +  +   R
Sbjct: 127 ----------------------DNYRKKGKTKPDFTDAAAMVAFRQECRAYAEHWLSEQR 164

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            + K L ++ D             + I   I   A  G +Y G  P   S
Sbjct: 165 KEFKRLGVEGDWDHPYTTMAFAAEAQIAREIMKFAENGLLYRGSKPVMWS 214



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 27/170 (15%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------ 328
            +       G V     P   ++  +    +     F+       +   + K D      
Sbjct: 541 AVFVKENAYGEVVILKDPQVNARIAEAFAAEGADAWFKEGAKERFLSGLVEKPDHWEMVR 600

Query: 329 ---------GSYTYFA----ADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAV 374
                    GS   F      DL     +   G D ++Y+ GSD   G+      +  + 
Sbjct: 601 DVLDVWFDSGSTHAFTLEVRPDLKAA--RPPEGNDRVMYLEGSDQHRGWFHSS--LLESC 656

Query: 375 SEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             + +   +V+L     L  DG   KMSK  G+  + + V+ + G+D +R
Sbjct: 657 GTRGRPPYDVVLTHGFVLDEDGR--KMSKSLGNVTSPQDVIKQSGADILR 704


>gi|326559779|gb|EGE10189.1| leucyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGD 148
           N     S + K L +   S   Y  N                 P+G +H+GH R   + D
Sbjct: 10  NF----SAIEKQLQTQWESDKRYHTNNETTDKPTRYMLSMFPYPSGKLHMGHVRNYAITD 65

Query: 149 TLASLMAFSGYEVT 162
            L+      GYEV 
Sbjct: 66  VLSRYYRQKGYEVM 79


>gi|300855265|ref|YP_003780249.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300435380|gb|ADK15147.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 471

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 101/322 (31%), Gaps = 46/322 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +  D L     +  Y+V     I D G                        L
Sbjct: 38  HIGNLRTYIFEDILKKAFEYGHYKVKHVMNITDVGH-----------------------L 74

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G     +G E  +K   E+  F E  +       +++    + +      ++  
Sbjct: 75  QSDADTGEDKMQIGAERENKTVWEIAKFYENAFFEDCHKLNIRKPDIVCKATDHIQDMID 134

Query: 257 DIFISEDDFHRGDP-SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LL 310
            I   E   +       +   ID       +    +   ++      D ++K      L 
Sbjct: 135 IIKTLEKKGYTYTSKGNVYYEIDKFKDYNKLANLSMEELEAGARIDVDENKKNPLDFVLW 194

Query: 311 FRSTMVGDDVDR---PLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--YV 364
           F ++   D + +   P  K    +      +       +   D + I+  G DH    + 
Sbjct: 195 FTNSKFKDQIMQWNSPWGKGFPGWH-----IECSAMSIKYLGDRIDIHCGGVDHIPVHHT 249

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VR 423
             +    A +  K     +    LV    DG   KMSK  GDF+TL  +  E  S    R
Sbjct: 250 NEIAESEAVLGHKWVNYWMHGEFLV--LSDG---KMSKSKGDFLTLSKIEKEGFSPMDYR 304

Query: 424 FMMLWRKNSELLDFDFCKVKEQ 445
           +  L  +  + L F F  +++ 
Sbjct: 305 YFCLQSRYRKQLMFSFDALRQA 326


>gi|283458153|ref|YP_003362769.1| leucyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134184|dbj|BAI64949.1| leucyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 831

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       + +        KG K  ++     P+G +H+GH     +GD  A      G
Sbjct: 21  AKWRPYWDETKVFQPTGDAPKGRKYVLDMF-PYPSGDLHMGHAEAFAIGDMNARYFKQCG 79

Query: 159 YEV 161
           Y+V
Sbjct: 80  YDV 82


>gi|261211065|ref|ZP_05925354.1| valyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839566|gb|EEX66177.1| valyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|260774917|ref|ZP_05883818.1| glutamyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609172|gb|EEX35330.1| glutamyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 475

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 96/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MQWMGLEWNEGPYFQSKRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  N  A++G  +      PK  +    D  R 
Sbjct: 112 QEAA----------KEMPRYDANHPKIVAANAEAKEGDAFVIRFRNPKEGSVVFEDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   +  +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEIANEQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|258625830|ref|ZP_05720709.1| Valyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582068|gb|EEW06938.1| Valyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|241764533|ref|ZP_04762552.1| valyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366025|gb|EER60635.1| valyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 974

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 75/256 (29%), Gaps = 38/256 (14%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G+             +I+    N TG +H+GH     + D+L       G+       
Sbjct: 46  AAGVRGTGAPQAGEPAFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGFNTVWVPG 105

Query: 167 INDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
            + AG   QI      V  R  Q               GV    +G    +   + +   
Sbjct: 106 TDHAGIATQI------VVERQLQE-------------QGVSRYDMGPTPPEARKNFVSKV 146

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
            E       K+ S   +   +R    +++   + F  +D   +     + D    L  QG
Sbjct: 147 WE------WKEQSGNTITTQMRRMGDSVDWSREYFTMDDKLSK----VVTDTFVKLYEQG 196

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-------D 337
            +Y G          Q    D +            +  PL    GS T           D
Sbjct: 197 LIYRGKRLVNWDPKLQSAVSDLEVESEEKDGSLWHIAYPLADGSGSLTVATTRPETMLGD 256

Query: 338 LAYFKCKYERGFDNMI 353
           +A      +  + ++I
Sbjct: 257 VALMVHPEDARYTHLI 272


>gi|229513430|ref|ZP_04402894.1| valyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229349307|gb|EEO14263.1| valyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|229524486|ref|ZP_04413891.1| valyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338067|gb|EEO03084.1| valyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|229497007|ref|ZP_04390712.1| glutamyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316109|gb|EEN82037.1| glutamyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 506

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 102/289 (35%), Gaps = 28/289 (9%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  + F + +PTGP+H+G  R A+     A    F G  + R   I D  ++       
Sbjct: 6   QKPRVRF-APSPTGPLHIGGVRTALYNYLFAR--HFGGDMLLR---IEDTDSKRFVPGAE 59

Query: 181 VFWRYQQALYNNDSDLPEGYYPGV--YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            +          + D   G       Y +   +++  +Y ++LL           K Y  
Sbjct: 60  AYILEALNWLGIEIDEGVGVGGECGPYRQSERRDIYREYVAQLLREG-----KAYKAYDT 114

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              ++  R+ +     Q+D      +  + D    ++ I  L   G  Y   +     + 
Sbjct: 115 AEELEAARNAIPNF--QYDATT--RNSMKNDLVLSKEEIRALEEAGVPYVVRIKIEPGEE 170

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
               D+ R ++   S+++    D+ L K SD   TY    LA     +  G  ++I   G
Sbjct: 171 VVVNDLIRGEVRINSSIID---DKVLYKSSDDLPTYH---LANIVDDHLMGITHVIR--G 222

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +        + +  A+  +          L  L +     K+SKR GD
Sbjct: 223 EEWLPSAPLHKLLYRALGWEDTMPQ--FAHLALLLKPEGNGKLSKRDGD 269


>gi|289207669|ref|YP_003459735.1| valyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943300|gb|ADC70999.1| valyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 925

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 60/217 (27%), Gaps = 34/217 (15%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P  + +       +   +     G+     +     N TG +H+GH     + DTL  
Sbjct: 5   FDPKSIEQTQYERWEAANIFAPPESGEANYCIL-LPPPNVTGTLHMGHAFQHTLMDTLIR 63

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                     R  +  D                   L+   +D        V  + +  E
Sbjct: 64  ---------YRRMH-GDR-----------------TLWQGGTDHAGIATQMVVERQLAAE 96

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                     +   E +L  V ++  ++   I R  ++ L    D          G    
Sbjct: 97  -----GKSRHDLGREDFLKAVWEWKHESGGTITRQ-MRRLGDSVDWSRERFTMDDGLSEA 150

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +R++   L  +G +Y G               D + L
Sbjct: 151 VREVFVRLHDEGLIYRGKRLVNWDPVLHTALSDLEVL 187


>gi|153801097|ref|ZP_01955683.1| valyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123330|gb|EAY42073.1| valyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|153215708|ref|ZP_01950089.1| valyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114626|gb|EAY33446.1| valyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|62290060|ref|YP_221853.1| glutamyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699986|ref|YP_414560.1| glutamyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024300|ref|YP_001935068.1| glutamyl-tRNA synthetase [Brucella abortus S19]
 gi|254689371|ref|ZP_05152625.1| glutamyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697504|ref|ZP_05159332.1| glutamyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|256257617|ref|ZP_05463153.1| glutamyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260546611|ref|ZP_05822350.1| glutamyl-tRNA synthetase 2 [Brucella abortus NCTC 8038]
 gi|260754889|ref|ZP_05867237.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 6 str. 870]
 gi|260761930|ref|ZP_05874273.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883901|ref|ZP_05895515.1| glutamyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248459|ref|ZP_06932177.1| glutamyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309412|sp|Q57CZ2|SYE2_BRUAB RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|115305748|sp|Q2YRQ9|SYE2_BRUA2 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|238689376|sp|B2S5Z7|SYE2_BRUA1 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|62196192|gb|AAX74492.1| GltX-2, glutamyl-tRNA synthetase [Brucella abortus bv. 1 str.
           9-941]
 gi|82616087|emb|CAJ11125.1| Glutamyl-tRNA synthetase, class Ic:Arginyl-tRNA synthetase, class
           Ic:Aminoacyl-tRNA synthetase, class I:Glutamyl-tRNA
           synthe [Brucella melitensis biovar Abortus 2308]
 gi|189019872|gb|ACD72594.1| glutamyl-tRNA synthetase [Brucella abortus S19]
 gi|260095661|gb|EEW79538.1| glutamyl-tRNA synthetase 2 [Brucella abortus NCTC 8038]
 gi|260672362|gb|EEX59183.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674997|gb|EEX61818.1| glutamyl-tRNA synthetase 1 [Brucella abortus bv. 6 str. 870]
 gi|260873429|gb|EEX80498.1| glutamyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175628|gb|EFH34975.1| glutamyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 473

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 50/302 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VR 423
            R
Sbjct: 253 YR 254


>gi|147674393|ref|YP_001218001.1| valyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262167534|ref|ZP_06035239.1| valyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|146316276|gb|ABQ20815.1| valyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227014393|gb|ACP10603.1| valyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262023987|gb|EEY42683.1| valyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|15642499|ref|NP_232132.1| valyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153822412|ref|ZP_01975079.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227082622|ref|YP_002811173.1| valyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507439|ref|ZP_04396944.1| valyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509636|ref|ZP_04399117.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229516761|ref|ZP_04406207.1| valyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606945|ref|YP_002877593.1| valyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254851048|ref|ZP_05240398.1| valyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744518|ref|ZP_05418470.1| valyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262154658|ref|ZP_06028784.1| valyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|298500666|ref|ZP_07010470.1| valyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|12585350|sp|Q9KP73|SYV_VIBCH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|9657085|gb|AAF95645.1| valyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126520055|gb|EAZ77278.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227010510|gb|ACP06722.1| valyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229345824|gb|EEO10796.1| valyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353110|gb|EEO18049.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229354944|gb|EEO19865.1| valyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229369600|gb|ACQ60023.1| valyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846753|gb|EET25167.1| valyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738043|gb|EET93436.1| valyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030498|gb|EEY49136.1| valyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297540835|gb|EFH76892.1| valyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|326330779|ref|ZP_08197080.1| valine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325951309|gb|EGD43348.1| valine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 876

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 35/187 (18%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    ++D+ G+D+VR+     +      FD  ++K   +      
Sbjct: 593 DPDRKKMSKSKGNVVVPTEILDKFGADAVRWRAALTRPGMDSPFDETQMKVGRR------ 646

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                     I   +K +  ++         I Q  +           +A     I  AT
Sbjct: 647 ------LAMKILNASKFVLGNVGAATLNPVAITQPVDC--------ALMARLKETITKAT 692

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            A        Y      + +  F   W    +   L   +A +    +       +  + 
Sbjct: 693 DAF-----TAYDYSTALETSEKF--FWEFCDDYLELVKERAYDEDGGLA----TESARAT 741

Query: 570 INSGLNI 576
           + + L++
Sbjct: 742 LATALHV 748


>gi|291532689|emb|CBL05802.1| valyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 841

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 49/160 (30%), Gaps = 33/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       GY        + AG       ++   +    L
Sbjct: 4   PNVTGQLHMGHAMDNTLQDILIRFRRMQGYNTLWMPGTDHAG-------IATQAKVDAQL 56

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                        GV    +G+E           F E  W    K+     +   IR   
Sbjct: 57  RE----------QGVSRYDIGRE----------KFLEHAW--AWKEKYGNRIKYQIR--- 91

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             L    D          G    +R++   L ++G +Y+G
Sbjct: 92  -TLGSSCDWDRERFTMDEGCSHAVREVFVQLYKKGLIYQG 130



 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            G+D +I+         V R+  +     +     +V +  LV   RD    KMSK  G+
Sbjct: 442 TGYD-IIFFW-------VARMVMMGLEFGKDIPFKHVFIHGLV---RDSQGRKMSKSLGN 490

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
            I    V+++ G+D++RFM++        + F + +V+    
Sbjct: 491 GIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN 532


>gi|255327531|ref|ZP_05368598.1| leucine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295425|gb|EET74775.1| leucine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 831

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       + +        KG K  ++     P+G +H+GH     +GD  A      G
Sbjct: 21  AKWRPYWDETKVFQPTGDAPKGRKYVLDMF-PYPSGDLHMGHAEAFAIGDMNARYFKQCG 79

Query: 159 YEV 161
           Y+V
Sbjct: 80  YDV 82


>gi|209877248|ref|XP_002140066.1| cysteinyl-tRNA synthetase [Cryptosporidium muris RN66]
 gi|209555672|gb|EEA05717.1| cysteinyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
          Length = 591

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 77/453 (16%), Positives = 141/453 (31%), Gaps = 78/453 (17%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA-FSGYEVTREYYINDAGAQIN 175
              G ++N            H+GH R  V  D +  ++  + GY+V     I D   +I 
Sbjct: 55  PVNGKRINWYACGPTVYDSAHLGHARTYVTFDIVRRILEDYFGYDVYMVMNITDIDDKII 114

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIV 233
             ++                             + +E   ++  ++  LN      +  V
Sbjct: 115 KRSIEQ--------------------KRDNFLDLAREYEKEFFDDMHALNVKPPDIITRV 154

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISED----------DFHRGDPSPIRDIIDNLARQ 283
            ++  + +  I     +    + D  +  D           + R +P  + D    L  +
Sbjct: 155 SEFIPEILDYISTIIYRGFAYECDGSVYFDINAFRSKEGHFYGRMEPKSVADESKVLEGE 214

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
           G + E      K K +         L  ++       D P  K    +    + +A    
Sbjct: 215 GDLGE----HSKDKKSPL----DFALWKKAKPGEPFWDSPWGKGRPGWHIECSAMA---- 262

Query: 344 KYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
               GF   I+  G D     H   + + EA        + Q          L+  G   
Sbjct: 263 SNTLGFPIDIHSGGIDLRFPHHDNELAQSEAH-----YDQPQWVNYFLHSGHLHIHGA-- 315

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC-KVKEQSKENPVFYVQYA 457
           KMSK   +F T+R V+ E     +R + L  K    ++F     +KE    + VF   +A
Sbjct: 316 KMSKSLKNFTTIRDVLKEYSPRHIRMLFLLHKWDGPINFSPETSLKEAVAVDKVFINFFA 375

Query: 458 YARCRSIFRQAKDIFP---DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
             +     R +    P   D++ +           + D      +      P VI +   
Sbjct: 376 NVKAN--LRISFIENPLKHDIEEEKLRLATECAAEKIDKQLRDNLNT----PEVISS--- 426

Query: 515 AQEPYKLAFYLYDLASVF-HGHWSHGRENPRLR 546
                    YL  +A+ + +   S+    P LR
Sbjct: 427 -------LQYLVSVANSYMNSRASNKVVCPILR 452


>gi|167923006|ref|ZP_02510097.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 967

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAVLTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|159897286|ref|YP_001543533.1| glutamyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|229470618|sp|A9AXJ1|SYE_HERA2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|159890325|gb|ABX03405.1| glutamyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 495

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 66/418 (15%), Positives = 125/418 (29%), Gaps = 82/418 (19%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R  +          G  L  +      +  R+ ++  A  Q+ +   
Sbjct: 13  APSPTGYLHIGSLRTVLFSWLWARHTGGQFLLRI-----EDTDRKRFVEGAEEQLTSSLQ 67

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           ++   + +         P       Y +    E+   ++  L++           D    
Sbjct: 68  AIGLMWDEGPIVGGPHAP-------YKQSERLEIYQAHAQALIDKGVAYRSYATAD---- 116

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                   ++ A+N + +           +   I D        G  Y   L    +  T
Sbjct: 117 --------EIAAINAEREARGEPKLLVFRNLPGIDDAARE--AAGADYNVRLSLKTTGQT 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R Q++F +  +    D  LLK+DG  TY    LA     +  G  +++     +
Sbjct: 167 VVQDLVRGQIVFDNAALKMP-DPVLLKTDGFPTYA---LAAMVDDHLMGITHVLR--ADE 220

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------- 411
                     +  A   ++    V +     L  DG   K+SKR GD             
Sbjct: 221 WIPTWPIHHQIYEAFGWEQP---VWVHVPQVLGSDGK--KLSKRHGDTSVTEYIDLGFVP 275

Query: 412 ----HVVDEVG------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
               + +  +G             + +    L R       FD  K+      N V+   
Sbjct: 276 EAIINYLALIGWSYDDKTEFMTLEELIERFDLNRIRPSGGVFDRDKLLHF---NGVYLRN 332

Query: 456 YA----YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
            A      R      +A  I  +       +         D      +  L+E P ++
Sbjct: 333 MAPAELAQRVAPYLSKAGLISAEPTAAELAKITEYLPLVQDR-----LKLLSEAPELL 385


>gi|118383772|ref|XP_001025040.1| hypothetical protein TTHERM_00467440 [Tetrahymena thermophila]
 gi|89306807|gb|EAS04795.1| hypothetical protein TTHERM_00467440 [Tetrahymena thermophila
           SB210]
          Length = 601

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 86/549 (15%), Positives = 170/549 (30%), Gaps = 53/549 (9%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI--VVSGIEYGRNLIGKGT 121
           IA+ +  ++ ++  V    I   G +N  +        + +I    S      +  G   
Sbjct: 70  IAQELCVQLPMNDFVAGANIDSLGQLNFKIKDQNYINGIKAISKAQSASTLEVDYYGDKQ 129

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I F  +       +   R A + +T+A +    G EV R   I     Q +     +
Sbjct: 130 KHCILFPFSQIAEKPLLNAFRGANISETMARIQKTLGIEVLRVGVI-----QNSQPFHGI 184

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKH--VGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            + Y + + N    + EG      L    V KEL            + + +  +     +
Sbjct: 185 IYAYLKEMQNKTGKIDEGAINFQKLTEFIVSKELFSHEEVAQFGNKQIQEMESIDPALKE 244

Query: 240 AMMKIIRDDLKALNIQHDIFISED-DFHRGD--PSPIRDIIDNLARQGYV-YEGILPPPK 295
            M K+    +         F  E+    RGD   S  +  ++ L  +G +  EG      
Sbjct: 245 IMEKLTNASIGNFQESFSKFTPENIKLIRGDKLESSTQQYLEALRARGVLKNEGKHLLNY 304

Query: 296 SKTTQKCDMDRKQ---------LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
                   +D             L RS  + D V    + SD        ++       E
Sbjct: 305 VHNKNIAFVDPIGSLTREGFLVGLLRSLHIEDLVKEFHIASDIQDELLYKNIQSILN--E 362

Query: 347 RGFDNMIYV-----MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            G D  +       + S+ +    ++  +          I  +  +   L+     + + 
Sbjct: 363 CGIDAKLNYYTHNNLFSEQND-KAQINTLVKLYLLVICHIIFIYNKQQDLFTQMKQLNIV 421

Query: 402 KRAGDFIT-LRHVVDEVGS-------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           K    +   + ++++E G           R++   +            V E    N    
Sbjct: 422 KYKQKYPDIMPNLIEEQGEIFLDQCLGWTRYLDHRKSRKTPYLMSVENVLEFIHSNEEL- 480

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                   R I  +  D +      + P  +       + +E  L   L  +P  +  + 
Sbjct: 481 -----TNTRQILLEMFDSYRIRREGVAP--ISDLFIFENQNERFLAKVLMYFPDSLHKSL 533

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMM-RLQLVHAVASII 570
           +  E   L  Y   L S  H    H ++    +     ++  +  +  R+ L+ A   I+
Sbjct: 534 LTNEFKPLIEYSELLISTIH----HMQKQNVFKSFDPEDKLTERQIANRVVLLDATNKIL 589

Query: 571 NSGLNIIGV 579
           +    IIG+
Sbjct: 590 HKLFYIIGI 598


>gi|89075463|ref|ZP_01161874.1| glutamyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048735|gb|EAR54306.1| glutamyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 474

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 91/279 (32%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLYA---KHMGGEFVLR--IED--TDLERSTQEAIDAIMEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   + +  EG Y          E+ D+         E+K       Y  + ++  IR++
Sbjct: 61  MEWLELNWDEGPYYQTKRFDRYNEVVDQL------LAEDKAYKC---YCPKELLDEIREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++           R D +  + +  N A        I      + T   D   + 
Sbjct: 112 QMAAGVKP----------RYDANHPKIVAANAAATEDSPFCIRFRNPKEGTVVFDDKIRG 161

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  +    D  D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 162 HIEIANSELD--DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        + L  DG   K+SKR G  
Sbjct: 215 NIYKALGAPVPEFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|85716981|ref|ZP_01047944.1| glutamyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696183|gb|EAQ34078.1| glutamyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 474

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 68/434 (15%), Positives = 128/434 (29%), Gaps = 82/434 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G ++       D          ++ 
Sbjct: 4   PVVTRFAPSPTGFLHIGGGRTALFNWLYAR---KHGGKMLLRIEDTDRARSTPEAIDAIL 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                     D D+   +      + + ++L  +       +   + L  +++ +     
Sbjct: 61  DGLTWLGIEWDDDVVYQFSRVARHREIAEQLLAE-GKAYRCYATSEELSQMREKARAEGR 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             + D         D   SE       P  ++  I  L            P   +T  + 
Sbjct: 120 AKLYD-----GRWRDRDPSEA------PPDVKPTI-RLKA----------PLTGETVIED 157

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +  + +     +     D  LL+ DG+ TY    LA     ++ G  ++I   G DH  
Sbjct: 158 QVQGRIVWQNENLD----DLVLLRGDGTPTYM---LAVVVDDHDMGVTHIIR--GDDHLI 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITL 410
              R + +   +        V +   + L       K+SKR G                L
Sbjct: 209 NAARQKQIYDTLGW-----AVPIMAHIPLIHGPDGSKLSKRHGALGVDAYRAMGYLPAAL 263

Query: 411 RHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           R+ +  +G            + +    L         FDF K++  +      Y++    
Sbjct: 264 RNYLVRLGWSHGDQEIFSTQEMIEAFDLPAIGRSAARFDFAKLENLNGH----YIRNCDD 319

Query: 460 RC-RSIFRQAKDIFP-DLDF-----DLFPRNVIPQESEFDTSELQLIVHL--AEY----- 505
                +F  A D  P   D      D+    ++            LI  +  A +     
Sbjct: 320 HALMRLFENALDYVPRGADLKPKLNDVTRAQLLRAMPGLKERAKTLIELIEGARFIFADR 379

Query: 506 PRVIE-NATIAQEP 518
           P  IE  A     P
Sbjct: 380 PLTIEAKAAALLTP 393


>gi|254191170|ref|ZP_04897675.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938843|gb|EDO94513.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 967

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAVLTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|254183692|ref|ZP_04890284.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184214225|gb|EDU11268.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 967

 Score = 42.6 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAVLTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|323465875|gb|ADX69562.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 474

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 116/377 (30%), Gaps = 52/377 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R ++  DT+   + + GY+V       D   ++   A +      +
Sbjct: 27  CGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYKVKYVSNFTDVDDKMINEARAEETTVPK 86

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 +   E          +  E A  +        E           + A ++ + D
Sbjct: 87  LAEKFINAFLEDT------TALNIEPATLHPRATHEIKE-----------IIAFVQTLID 129

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           I+ L                +  +K D    
Sbjct: 130 KGYAYESHGDVYYRAKKFKHYG-ELSDQNIERLEEG-----ASEHINDEEQNRKEDPIDF 183

Query: 308 QLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L  ++    D++  D P  K    +      +       +   D  I + G        
Sbjct: 184 ALW-KAQKEPDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFP 236

Query: 366 RLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             E   A    K  +  V   L    V + +D    KMSK   +F+T+  ++ EV    +
Sbjct: 237 HHENEIAQSEAKTGKKFVNYWLHNGFVTVGKD--QEKMSKSLHNFVTVHDILKEVDPQVL 294

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSK-----ENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           RF M   +    +++    +++ +      +N +  + Y          + +D  P  D 
Sbjct: 295 RFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINY----------RLEDDTPSKDS 344

Query: 478 DLFPRNVIPQESEFDTS 494
           D   + +     +F+ +
Sbjct: 345 DELAKAIAKTNEKFEVA 361


>gi|323699457|ref|ZP_08111369.1| valyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459389|gb|EGB15254.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 888

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 28/217 (12%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     ++      +  L RD    KMSK  G+ I    ++
Sbjct: 484 VTGFD-ILFFWVARMMMMGLQF-MGEVPFHHVYIHALVRDEQGKKMSKSTGNVIDPLDMI 541

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
            + G+D++RF +              K+ EQ  E    ++   +   R       D+ PD
Sbjct: 542 GKYGADALRFTLTSFAAMGRDI----KLSEQRIEGYKHFMNKVWNATRFAMMNLPDVIPD 597

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFH 533
            D               D ++  ++  L E    + +AT      ++A  LY  + S F 
Sbjct: 598 ADVHEAS----------DLADRWILHRLEEVKETVASATNDYRFNEIAQTLYKFIWSEFC 647

Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
             +           +   + +          A   ++
Sbjct: 648 DWY----LEMIKPALYGEDERAK-------EATQRVL 673



 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 60/201 (29%), Gaps = 37/201 (18%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L+ +Y    + +   S   +   +  +  G G   +I     N TG +H+GH     + D
Sbjct: 6   LAKAYEPWDVEEKWESHWEAEKTFTPDPDGPGDPYSIVIPPPNVTGVLHMGHALNLTLQD 65

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            L       G  V      + AG  I T  +       + L  +D               
Sbjct: 66  ILCRFNRQQGRNVLWVPGTDHAG--IATQNVVERQLKAEGLTRDD-------LGRDKFIE 116

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              E   +                        ++  IR    +++   + F     F   
Sbjct: 117 RVWEWKKEKGD--------------------HILSQIRRMGASVDWTRECF----TFDEQ 152

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               +R++   L  QG +Y+G
Sbjct: 153 RAKAVREVFVALYEQGLIYKG 173


>gi|169832008|ref|YP_001717990.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|238688343|sp|B1I5R7|SYL_DESAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169638852|gb|ACA60358.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 826

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
               GI +  +   +     +E     P+G +H+GH R   +GD +A      GY+V
Sbjct: 18  WETEGIYHVPDFSNRPKYYCLEMF-PYPSGNLHMGHVRNYAIGDVVARFKTMRGYDV 73


>gi|114327130|ref|YP_744287.1| isoleucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315304|gb|ABI61364.1| isoleucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 981

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 35/224 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-----LLKSDGSYTYFAADLAY 340
           V E I+   + +               +    +D ++      +    GS        A+
Sbjct: 540 VMERIVSAFREEGADAWYSSPPSRFLGNDRNPEDYEQVFDVIDVWFESGSTH------AF 593

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPI 398
                +  +   +Y+ GSD   G+ +    +  AV  +  A    +L     L   G   
Sbjct: 594 VLEARDMKWPADLYLEGSDQHRGWFQSS--LLEAVGTRGSAPFEAVLTHGFVLDEQGR-- 649

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+    + V+D+ G+D +R  ++     + L      +K+Q +          Y
Sbjct: 650 KMSKSLGNVTAPQEVIDQYGADILRLWVMSSDTRDDLRIGKEILKQQGEL---------Y 700

Query: 459 ARCRSIFRQ---------AKDIFPDLDFDLFPRNVIPQESEFDT 493
            R R+  R            +   + D     R V+ + +E DT
Sbjct: 701 RRLRNTLRWILGSLDGFEEAERVREADMPELERWVLHRLTELDT 744


>gi|299536132|ref|ZP_07049446.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728407|gb|EFI68968.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 924

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 16/137 (11%)

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCEL 388
              Y   D+A F  ++    D +I   G D   G+   L AV+   + K    NVL    
Sbjct: 526 QQHYPFEDVANFHHQF--PADVVIE--GIDQTRGFFYSLLAVSTLFTGKPPYKNVLSLGH 581

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-------RKNSELLDFDFCK 441
           V    D    KMSK  G+ +    +++E G+D++R+  L        ++ S+ +  D   
Sbjct: 582 V---LDEHGQKMSKSKGNALEPVELIEEYGADALRWAFLVDSSPWNPKRFSKKVVLDAKS 638

Query: 442 VKEQSKENPV-FYVQYA 457
               + +N   FY  YA
Sbjct: 639 KLVDTLDNTFKFYDMYA 655


>gi|237510265|ref|ZP_04522980.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|235002470|gb|EEP51894.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 967

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAVLTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|114705798|ref|ZP_01438701.1| isoleucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538644|gb|EAU41765.1| isoleucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 1021

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 87/271 (32%), Gaps = 30/271 (11%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-----LLKSDGSYTY 333
            + +   V E IL   + +       D  +  F  +   ++         +    GS   
Sbjct: 571 EILKDDAVNERILQAFREEGADAWFADGARERFLGSKANENWAMVRDILDVWFDSGSTHA 630

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           F       + + +  +   +Y+ GSD   G+       +     +     VL    V   
Sbjct: 631 F-----CLEKRPDLKWPADLYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVLTHGFVM-- 683

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            D    KMSK  G+ +T + V+ + G+D +R  ++          D    K   + N   
Sbjct: 684 -DEEGRKMSKSLGNVVTPQEVIKQSGADILRLWVVS----SDYSEDLRLGKTILQTNVDS 738

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y +        +   A D    +  D  P             E  ++  LAE   ++   
Sbjct: 739 YRKLRNTVRWMLGTLAHDRGETVSHDEMP-----------ELERLMLHRLAELDELVRKG 787

Query: 513 TIAQEPYKLAFYLYD-LASVFHGHWSHGREN 542
               +  +++  L D + +     +   R++
Sbjct: 788 YDGFDFKRISRALLDFVVTELSAFYFDVRKD 818


>gi|47459374|ref|YP_016236.1| leucyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458704|gb|AAT28025.1| leucyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 630

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 23/203 (11%)

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            +   I    +       ++  ED     +   I ++++    +  +  G    P +  T
Sbjct: 237 KLQDWIFARQRYWGEPFPVYFDED----NNVYLIDELVELPHMENIMPSGTGEGPLATNT 292

Query: 300 QKCDMDRKQLLFRSTMVG---------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           +     +   +F+                +   + + DG+Y    +  AY         D
Sbjct: 293 EWVQYKKNNKIFKRDTNTMPQWAGSCWYYLAYIMKQEDGTYLPIDSKKAYEAFSKWLPVD 352

Query: 351 NMIYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRA 404
             +Y+ G +H+     Y +    +   +     +     L+ + + L +DG   KMSK  
Sbjct: 353 --LYIGGQEHAVLHLLYARFWHKILYDLKIVPTKEPFQKLINQGMILGKDGQ--KMSKSL 408

Query: 405 GDFITLRHVVDEVGSDSVRFMML 427
           G+ +    ++   G+D++R   +
Sbjct: 409 GNVVNPDEIIQNFGADTLRVYEM 431


>gi|71281480|ref|YP_267488.1| valyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|90103531|sp|Q488M6|SYV_COLP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71147220|gb|AAZ27693.1| valyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 973

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 34/198 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L +       +  +  G+G   +I     N TG +H+GH     + DTL 
Sbjct: 21  TFNPTDIEQSLYTSWEEQGYF--SPTGEGDSYSIAIPPPNVTGSLHMGHAFQQTIMDTLI 78

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 79  RYQRMQGKNTLWQTGCDHAGIATQMV-------------------------------VER 107

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++    I   ++ L    D          G   
Sbjct: 108 KIAAEEDKTRHDYGREGFIDKIWEWKEESG-GTIGKQMRRLGNSIDWSRERFTMDDGMSE 166

Query: 272 PIRDIIDNLARQGYVYEG 289
            ++++   L     +Y G
Sbjct: 167 AVQEVFVRLFEDDLIYRG 184


>gi|313678677|ref|YP_004056417.1| isoleucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950455|gb|ADR25050.1| isoleucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 892

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 75/513 (14%), Positives = 158/513 (30%), Gaps = 83/513 (16%)

Query: 64  IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123
           +A   VA I  +     V    +G+I   ++   L      +                 +
Sbjct: 244 LANAAVA-IGENFTYCRVEHNNQGYI---VAKE-LANKFIEVCHFDEAKVTIDFNASELI 298

Query: 124 NIEFVSA--NPTGPMHVGHCRCAVVGDTLASLMAFSGYE---------VTREYYIND--- 169
           NI++ S   N   P+ +GH      G  L  +    G +         +    ++ D   
Sbjct: 299 NIKYRSVLNNLVCPVVIGHHVSLESGSGLVHIAPLFGEDDFQIGTLNSLEMIMHVEDDGV 358

Query: 170 ----AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKYSSELL 222
               AG            +    L +  + L +G     Y          L        +
Sbjct: 359 LNEQAGNYKGMFYEKANAQIFDELISKSALLAKGTIRHSYPHDWRTHKPILFRGTPQWFV 418

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDL-KALNIQHDIFISEDD--------FHRGD---- 269
           +  + K   + +  S+    +  +  L   ++ + D  IS           F+  D    
Sbjct: 419 SIEKIKQQLLKELESINTYPEWAKKRLINMISERKDWTISRQRTWGVPIIIFYDKDGKPI 478

Query: 270 -PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
             S I D + +L  +     G     + +  +    +     FR+     ++D   +  D
Sbjct: 479 INSAIFDYVIDLVEK----HGTDIWWEKEVDELLPEE-----FRNNGYSKEMDIMDVWFD 529

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCE 387
              T  A ++       +  +D  +Y+ GSD   G+       + A + K     ++   
Sbjct: 530 SGTTSLAVEI---DKNLKPPYD--LYLEGSDQYRGWFNSSLINSVAYTHKSPYKQIVSHG 584

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            V    D    KMSK  G+ +    V+ + G+D +R  +   + +  ++     + + S+
Sbjct: 585 FV---LDSKGEKMSKSKGNVVDPLKVIKKYGADILRLWVANAEYTNDVNISDEIINQNSE 641

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
                     Y + R+  +         ++D   +     +   +  EL+LI        
Sbjct: 642 I---------YRKIRNTIKFLLGNLNGYEYDESVKRTGIHQYIMN--ELELIK------E 684

Query: 508 VIENATIAQEPY----KLAFYLYDLASVFHGHW 536
            +  A            +  Y+ +L       +
Sbjct: 685 KVYKAYDEYNFSNVIKTINKYVVEL----SSFY 713


>gi|303232822|ref|ZP_07319506.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481012|gb|EFL44088.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 562

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYE 288
           L  V++ S    +   +D L  L  +H  F+          S +   + +L+  +     
Sbjct: 177 LKRVEEESYFFKLSAFQDRLLELYAKHPDFVQPTFRMNEVRSFVEGGLQDLSVSRTSFDW 236

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           GI  P  +K       D       S   G+  D P+ K+  ++ + A             
Sbjct: 237 GIPVPFDTKHVTYVWFDALLNYMTSVFYGE--DDPIRKNQFAFRWPAQ---CH------- 284

Query: 349 FDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCEL---VRLYRDGMPIKMSK 402
                 V+G D    + R   +   A  ++  +A    +       VR    G   KMSK
Sbjct: 285 ------VVGKD----IIRFHCIIWPAMLMAINEALPEHVFAHGFLTVRNSETGNAEKMSK 334

Query: 403 RAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             G+ I  + V+D +G D  R + M    + E     F ++K+    +         +R 
Sbjct: 335 SRGNAIAPQEVIDLLGIDGYRYYFMCDVIHGEDSAISFDRMKQVYNADLANSWGNLVSRT 394

Query: 462 RSIFRQAKDIFPDLDFD 478
            S+  +  D      FD
Sbjct: 395 LSMCAKYFDGQTPAIFD 411


>gi|254700451|ref|ZP_05162279.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261750952|ref|ZP_05994661.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261740705|gb|EEY28631.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 877

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHARNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|329121037|ref|ZP_08249668.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471199|gb|EGF16653.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 634

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 112/323 (34%), Gaps = 37/323 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV---------- 181
           P+  +H+GH  C  V DT+A      G +V      ++ G +I   A             
Sbjct: 16  PSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQKATEAGVTPIEYVDK 75

Query: 182 ----FWRYQQALYNNDSDL----PEGYYPGV-YLKHVGKELADKYSSELLNFPEEKWLPI 232
               F +  + L  ++ D      E +   V  L H   +  D Y  +      E W  +
Sbjct: 76  IVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFHKAYDKGDIYKGKY-----EGWYCV 130

Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             + +  ++  K++  +L A   +    +SE+ +           +  +    +  E   
Sbjct: 131 PCETFWPES--KLLEGNLCADCKRECKRVSEEAYFFKMSKYADRWLKFIEENPHFIEPES 188

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVG-----DDVDRPLLKSDGSYTYFAAD-LAYFKCKY 345
              +     K  ++   +   S   G     D      +  D    Y  A  +   K K+
Sbjct: 189 RRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTNYLTAVGIKDDKEKF 248

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           ++ +   ++++G +    + R   +   +      I +        +      KMSK  G
Sbjct: 249 KKYWPADVHLVGKE----IVRFHTIIWPIMLMSLDIEIPKQVYGHGWLVVEGEKMSKSKG 304

Query: 406 DFITLRHVVDEVGSDSVRFMMLW 428
           + +    ++ E GSD++R+ ++ 
Sbjct: 305 NVVDPIPLIHEFGSDAIRYYLMN 327


>gi|163796491|ref|ZP_02190451.1| Leucyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159178341|gb|EDP62885.1| Leucyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 867

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +G         K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 25  RWQRRWAETGAFEVEVDPAKPKYYVLEMF-PYPSGRIHMGHVRNYTLGDVVARYKKARGF 83

Query: 160 EV 161
            V
Sbjct: 84  NV 85


>gi|50119360|ref|YP_048527.1| valyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827246|sp|Q6DA54|SYV_ERWCT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49609886|emb|CAG73321.1| valyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 951

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 63/214 (29%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L         +  +        +I     N TG +H+GH     + DTL   
Sbjct: 6   NPQDIEQPLYEHWEKQGYFKPHGNTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     +                               V +++
Sbjct: 66  QRMQGKNTLWQAGTDHAGIATQMV-------------------------------VERKI 94

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           A +      ++  + ++  +  +  ++    I + ++ L    D          G  + +
Sbjct: 95  AAEEGKTRHDYGRDAFIDKIWQWKGESG-GNITNQMRRLGNSVDWERERFTMDEGLSNAV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++   L ++  +Y G          +    D +
Sbjct: 154 KEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|225852645|ref|YP_002732878.1| glutamyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256044803|ref|ZP_05447707.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113708|ref|ZP_05454512.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256263861|ref|ZP_05466393.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260565597|ref|ZP_05836081.1| glutamyl-tRNA synthetase 1 [Brucella melitensis bv. 1 str. 16M]
 gi|265991227|ref|ZP_06103784.1| glutamyl-tRNA synthetase 1 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995063|ref|ZP_06107620.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|30173192|sp|Q8YHG4|SYE1_BRUME RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|225641010|gb|ACO00924.1| glutamyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260151665|gb|EEW86759.1| glutamyl-tRNA synthetase 1 [Brucella melitensis bv. 1 str. 16M]
 gi|262766176|gb|EEZ11965.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263002011|gb|EEZ14586.1| glutamyl-tRNA synthetase 1 [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093992|gb|EEZ17926.1| glutamyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409166|gb|ADZ66231.1| glutamyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538876|gb|ADZ87091.1| glutamyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 473

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 98/302 (32%), Gaps = 50/302 (16%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  I   + +PTG +H+G  R A+     A      G ++       D          ++
Sbjct: 3   KPVITRFAPSPTGYLHIGGARTALFNWLYA---KHCGGKMLLRIEDTDRERSTEAATAAI 59

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
                    + D +    +      + V +EL          +   + L  +++ +    
Sbjct: 60  LDGLTWLGLDWDGEAISQFERAPRHREVAEELVAN-GKAYYCYASPEELEEMREKARAEG 118

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                D         D   SE       P+ ++ +I             +  P+   T  
Sbjct: 119 RPPRYD-----GRWRDRDPSEA------PAGVKPVI------------RIKAPRDGETVV 155

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  ++I   G DH 
Sbjct: 156 HDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVTHIIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R   +  A+     Q++      + L       K+SKR G           +G D+
Sbjct: 208 TNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----------ALGVDA 252

Query: 422 VR 423
            R
Sbjct: 253 YR 254


>gi|317477772|ref|ZP_07936965.1| glutamyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316906117|gb|EFV27878.1| glutamyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 508

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDFIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL   +  ++       ++A    I   
Sbjct: 68  GIPFDEGVSFGGDHGPYRQSERREIYKKYVQILLEAGK-AYIAFDTPEELEAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L   G  Y        ++     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLPKEEVDALIAAGKQYVVRFKIEPNEDVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|307566041|ref|ZP_07628499.1| isoleucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345229|gb|EFN90608.1| isoleucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 1220

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 71/301 (23%), Positives = 112/301 (37%), Gaps = 43/301 (14%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +D+   E     +   +   E +        N   
Sbjct: 575 LNDW-----NLSRSRFWGTPLPIWRDDNR-GEKCIGSLEELYAEIEKSVAAGVMKSNPFR 628

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGY 285
           +K   IV DYS +   KI   DL    +   + ++E    +G+P     D+ID     G 
Sbjct: 629 DKGF-IVGDYSQENYDKI---DLHRPFVDDIVLVNE----KGEPMYRESDLIDVWFDSGS 680

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345
           +    L  P      K  ++R  +        ++    L+ S    TY    +A      
Sbjct: 681 MPYAQLHYPFEGKINKSGLERHGM------TEEEYREKLVHS----TYEGVAVAPAFF-- 728

Query: 346 ERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                + I   G D   G+   L A+A  V +  A  NV+   LV    D    KMSK  
Sbjct: 729 ---PADFINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMSKHV 781

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQY 456
           G+ I+   ++D  G+D VRF M+      + L FD   V E  ++          F+  Y
Sbjct: 782 GNVISPFEMLDRYGADPVRFYMMTNSEPWDNLKFDPEGVDECRRKFFGTLYNTYSFFALY 841

Query: 457 A 457
           A
Sbjct: 842 A 842


>gi|237736331|ref|ZP_04566812.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421679|gb|EEO36726.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 869

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N         K         I    N +       +  +   P+G +HVGH R   +GD 
Sbjct: 5   NF---KEVEAKWQGKWENGHIFKTENKVEGKENYYVLVMLPYPSGKLHVGHARNYTIGDV 61

Query: 150 LASLMAFSGYEVTREYYINDAG 171
           +A      GY V     +N  G
Sbjct: 62  IARYKRMKGYNV-----LNPMG 78


>gi|237752079|ref|ZP_04582559.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376646|gb|EEO26737.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 821

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + K           Y         K  I  +   P+G +H+GH R   + D +A  
Sbjct: 4   NPKVIEKKWQKFWEKSGAYEPKENKSLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARK 63

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 64  FRKDGYNV 71


>gi|94501195|ref|ZP_01307717.1| isoleucyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426622|gb|EAT11608.1| isoleucyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 966

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 292 PPPKSKTTQKCDMDRKQLLFRST---MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                +  QK + +     F      ++GD+ D+     D    +F + + +     E  
Sbjct: 519 ENLIEQVAQKVEQEGIDAWFDLDAKELLGDEADQYDKVVDTLDVWFDSGVTHAAVLEEHP 578

Query: 349 -----FDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
                 D  +Y+ GSD   G+ +     +     K     VL         DG   KMSK
Sbjct: 579 ELQVPAD--LYLEGSDQHRGWFQSSMLTSVGARGKAPYKTVLTHGF---TVDGEGKKMSK 633

Query: 403 RAGDFITLRHVVDEVGSDSVR 423
             G+ ++ + VV+++G+D +R
Sbjct: 634 SLGNVVSPQDVVNKLGADILR 654


>gi|126436140|ref|YP_001071831.1| valyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126235940|gb|ABN99340.1| valyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 883

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   +    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPGAVEADIYQGWVEAGYFTADPDSDKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+EV            ++   ++     ++ L  +                     
Sbjct: 77  KRMQGFEVL-------WLPGMDHAGIATQTLVEKQLAVD--------------------- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKTKEDFGRELFIDKVWDWKRESG-GTIGAQMRRLGDGVDWSRDRFTMDDGLSRAV 163

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   +    D +
Sbjct: 164 RTIFKKLYDAGLIYQAERLVNWSPVLETAISDLE 197


>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|109894889|sp|Q3A9P1|SYC_CARHZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 465

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 110/340 (32%), Gaps = 56/340 (16%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
             +  KV +          +H+G+ R  V  DT+     + G+EV               
Sbjct: 16  PREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFEVI-------------- 61

Query: 177 LALSVFWRYQQALYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                   Y Q   + D  +       G+    +G++   +Y      F +   L + + 
Sbjct: 62  --------YVQNFTDIDDKIINRALEEGISPIELGQKYIIEY------FKDADRLGVKRA 107

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                + + I +      I+    + E  +       +   +D+ +  G +    L   K
Sbjct: 108 TVHPKVTEHIPEI-----IEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELK 162

Query: 296 SKTTQKCDMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           +    + D  +K      L  ++       + P     G   +     A         FD
Sbjct: 163 AGARVEVDEKKKNPLDFALWKKAKPGEPYWESPW--GPGRPGWHIECSAMSLKYLGENFD 220

Query: 351 NMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             I+  G+D     H   V + EA      +  A+  +    +          KMSK  G
Sbjct: 221 --IHGGGADLVFPHHENEVAQSEAFT---GKPFARYWMHNGFITV-----NQEKMSKSLG 270

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           +F  +R ++++     VRF +L       LDFD  K+ E 
Sbjct: 271 NFFLVREILEKFPGRVVRFFLLSTHYRSPLDFDDKKLNEA 310


>gi|15920845|ref|NP_376514.1| leucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|48428671|sp|Q974N4|SYL1_SULTO RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA
           ligase 1; Short=LeuRS 1
 gi|15621629|dbj|BAB65623.1| 945aa long hypothetical leucyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 945

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 82/285 (28%), Gaps = 24/285 (8%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N +       K       S +        K  K  I         P+H+GH R  +  D 
Sbjct: 5   NFF--NEIAFKWQKEWENSKVYEANPETDKPKKF-ITVAFPYTNSPLHIGHGRTYITADI 61

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL----------YNNDSDLPEG 199
            A  +   GY V   +     G  I +++ SV    ++ +                  + 
Sbjct: 62  YARYLRMKGYNVLFPFAFQFTGTPILSISESVKRGDEEIISTFVNIYQIPKEEIEKFSDP 121

Query: 200 YYPGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            Y   Y K+  K  A K          F      PI + +      K++           
Sbjct: 122 TYLAEYFKNNMKNTAKKLGLGIDWRREFTTVD--PIFEKFVQWQYRKLMELGYIKREDSP 179

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             +   D+F  G      D+   +     +Y           T + +     +       
Sbjct: 180 VAYCPRDEFPVGMHDTKGDVEPEITDLDGIYFPSGDYFFIAATPRPETIFGAVALLVNPE 239

Query: 317 GDDV------DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            D V      +R ++ S  +Y      +++ +   ++G D +  +
Sbjct: 240 ADYVIATDSLNRKVIISRQAYDKLKYQISFREEGEKKGKDLVGMI 284


>gi|15618018|ref|NP_224302.1| valyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835629|ref|NP_300153.1| valyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752950|ref|NP_445222.1| valyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241429|ref|NP_876370.1| valyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6226196|sp|Q9Z987|SYV_CHLPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4376354|gb|AAD18247.1| Valyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189594|gb|AAF38490.1| valyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978467|dbj|BAA98304.1| alyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33235937|gb|AAP98027.1| valyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 940

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 33/203 (16%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +G+        K     I     N TG +H+GH     + D L      SG+EV   
Sbjct: 23  WEKNGMFKAEASSDKPPYSVI-MPPPNVTGVLHMGHALVNTLQDVLVRYKRMSGFEVCWI 81

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
              + AG       ++     ++ L  ++      Y    +LKH+               
Sbjct: 82  PGTDHAG-------IATQAVVERHLQASEGKRRTDYSREDFLKHIW-------------- 120

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
                    K+ S + ++  +R     L    D               ++     L   G
Sbjct: 121 -------AWKEKSEKVVLSQLRQ----LGCSCDWDRKRFTMEPLANRAVKKAFKTLFENG 169

Query: 285 YVYEGILPPPKSKTTQKCDMDRK 307
           Y+Y G          Q    D +
Sbjct: 170 YIYRGYYLVNWDPVLQTALADDE 192


>gi|317051073|ref|YP_004112189.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946157|gb|ADU65633.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 822

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 6/161 (3%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   S    G         +     +E +   P+G +H+GH R   +GD +A      GY
Sbjct: 15  KWQDSWNSVGAFRALVDTSRPKFYCLEML-PYPSGRIHMGHVRNYAIGDAIARYKKMRGY 73

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA---DK 216
            V      +  G      A++      +  ++N + + +      +     +ELA   ++
Sbjct: 74  NVLHPMGWDAFGLPAENAAIAHNMDPGEWTWSNIAYMKQQLQKLGFSYDWERELATCSEE 133

Query: 217 YSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDLKALNIQ 255
           Y++       E +    I +  +        +  L    ++
Sbjct: 134 YAAFEQQLFIELYKKGLIYRKKAEVNWCDHCKTVLANEQVE 174


>gi|262274982|ref|ZP_06052793.1| valyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221545|gb|EEY72859.1| valyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 952

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + K L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEKALYQRWEEAGYFKPHGDTSKAAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCERMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGFYA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|257468915|ref|ZP_05633009.1| glutamyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063163|ref|ZP_07927648.1| glutamyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688839|gb|EFS25674.1| glutamyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 504

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 77/439 (17%), Positives = 144/439 (32%), Gaps = 73/439 (16%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-------AGAQINTLALS 180
           ++ +PTG  HVG    A+     A +   +G  + R   I D       AG++   +  +
Sbjct: 9   IAPSPTGDPHVGTAYIALFNLAFAHI--NNGDFILR---IEDTDQNRYTAGSE-QMIFDA 62

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           + W         D   P     G Y +    EL   Y+ +L+      +        ++ 
Sbjct: 63  LKWLDLTYAEGPDVGGP----YGPYRQSERFELYGDYAKQLVEKGG-AYYCFCTQERLEK 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           + +  +   KA                   S   + I      G  Y   L  P    T 
Sbjct: 118 LRERQKAMGKAPGYDGHC-----------RSLTPEEIQAKLAAGEPYVIRLKMPYEGETI 166

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  R  ++F +  +    D+ LLK+DG  TY    LA     +     ++I     + 
Sbjct: 167 IKDRLRGDIVFENNKID---DQVLLKADGYPTYH---LANVVDDHLMEVTHVIR--AEEW 218

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VG 418
                +   +  A      +   +      L R+    K+SKR  + ++L    DE  + 
Sbjct: 219 IASTPKHIQLYKAFGWDAPEFIHM-----PLLRNADRTKISKRK-NPVSLNWYRDEGYLK 272

Query: 419 SDSVRFMMLW----RKNSELL-------DFDFCKVKEQSKENPVF-YVQYAYARCRSIFR 466
              V F+ L      +N E+        +F+  KV   S   PVF  V+  +   + +  
Sbjct: 273 EGIVNFLGLMGYSFGENKEIFTLEEFKDNFNIDKV---SLGGPVFDLVKLGWVNNQHMRM 329

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
           +  D    L    F +     E+  +     ++  +     ++  +            L 
Sbjct: 330 KDLDELSKLAVPFFQQQGHVGENVSEKEYEAIVKIVG----ILRESAQT---------LK 376

Query: 527 DLASVFHGHWSHGRENPRL 545
           ++A     ++    E P +
Sbjct: 377 EIAVEATAYYQDEFELPEV 395


>gi|218263571|ref|ZP_03477652.1| hypothetical protein PRABACTJOHN_03340 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222694|gb|EEC95344.1| hypothetical protein PRABACTJOHN_03340 [Parabacteroides johnsonii
           DSM 18315]
          Length = 504

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 97/294 (32%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G ++     I D  +Q    
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQNGGDLILR--IEDTDSQ--RF 52

Query: 178 ALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                    +AL        E    G   G Y +   +++  KY  +LL      ++   
Sbjct: 53  VPGAEAYIIEALTWLGIKFDEGVGFGGEYGPYRQSERRDIYKKYVDQLLEAG-HAYIAFD 111

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               ++A  K I               S     R   +   + + +L   G  Y   +  
Sbjct: 112 TPEELEAKRKEIP--------NFQYDASTRMQMRNSLTLSEEEVKSLIEAGNQYVVRVKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPDEDIHVNDLIRGEVIINSSILD---DKVLYKSADQLPTYH---LANIVDDHLMEVTHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +      +          L  L +     K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRYFGWEDTMPR--FAHLALLLKPEGNGKLSKRDGD 267


>gi|195588909|ref|XP_002084199.1| GD12953 [Drosophila simulans]
 gi|194196208|gb|EDX09784.1| GD12953 [Drosophila simulans]
          Length = 994

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 97/354 (27%), Gaps = 62/354 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    + +        K     +     N TG +H+GH   A V D +A      G
Sbjct: 51  AYWEREHRQANLPKASASSCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQREQLG 110

Query: 159 YEVTREYYINDA--GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y+V       D   G     +A  V                           V + +A  
Sbjct: 111 YQV-------DWVPGTDHAGIATQVV--------------------------VERTIAAS 137

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            +          +L  V  +  +     I  DL+ L  + +               +   
Sbjct: 138 QAKTRHELGRSAFLDEVWRWKAEKG-AGIVQDLRQLGCKLNWQREYFTMDEQQAHAVNVA 196

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FA 335
            + L  +G +             +    D   +   S  + + V+  +   D    +   
Sbjct: 197 FERLFEEGLIQRRNSVVNWCTALRSAISD---IEVDSVEIKEPVEIAVPGYDRKVLFGRM 253

Query: 336 ADLAYFKCKYERGFDNMI--YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            D AY     E   D  +   V+ +       R E +   + +    ++ L     + YR
Sbjct: 254 YDFAYHVVDGETLPDGSVEEIVVST------TRPETI---LGDVAVAVHPLDPRYTK-YR 303

Query: 394 DGMPIKMSK--RAGDF--ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           +   +K+    R      +   +V  E G+ +V+             FDF    
Sbjct: 304 NIDQVKLKHPFRDDTIPLVFDINVDQEFGTGAVKI------TPAHDKFDFELAT 351


>gi|114704621|ref|ZP_01437529.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539406|gb|EAU42526.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 518

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL------------ 179
           P G  H+GH    +  D LA      GY+V      ++ G ++   A             
Sbjct: 14  PNGKPHIGHAYELIATDALARFKRLDGYDVFFLTGTDEHGIKMLQNARAQGLTPRELADA 73

Query: 180 --SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             + F R   AL  ++ D          +         + + ++       W  +  +  
Sbjct: 74  NSAEFQRMSAALGGSNDDFIRTSEARHKIACQAIWKRMEEAGDIYKDAYSGWYSVRDEAY 133

Query: 238 VQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
                  I +D   +  Q     +I E+ +     +    ++  L  +   + G      
Sbjct: 134 YGEDETHISEDGTRIGPQGTPVDWIEEESYFFRLSNFQDPLL-KLYAENPDFIGPNERRN 192

Query: 296 SKTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKC----KY 345
              +      R   + R+T      + GD+     +  D    Y  A   Y +     + 
Sbjct: 193 EVISFVKSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTA-TGYPEDGNGGRT 251

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           E    ++ +V+G D    + R   V        A + +        +      KMSK  G
Sbjct: 252 EFWPADL-HVIGKD----ITRFHTVYWPAFLMSAGLPLCKRVYAHGFLFNRGEKMSKSVG 306

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + I    +VD  G D +R+ +L  
Sbjct: 307 NVIDPFALVDTYGLDRLRYFLLRE 330


>gi|78357185|ref|YP_388634.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552202|sp|Q30ZF7|SYI_DESDG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78219590|gb|ABB38939.1| Isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 934

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 23/202 (11%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  + + E  F   +Y+ GSD   G+       +           VL    V    DG  
Sbjct: 548 AVVEQREECSFPADMYLEGSDQHRGWFHSSLLASVGTRGIPPYKAVLTHGYVV---DGEG 604

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I  + ++D+ G++ +R  +      E +      +              A
Sbjct: 605 RKMSKSIGNGIAPQEIIDKYGAEILRMWVSSADYREDVRISEEILSRLVD---------A 655

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           Y R R+  R         D        + Q    D   L + +   +    ++ A    E
Sbjct: 656 YRRIRNTCRYLLGNLS--DLSAADLLPVGQLESLDRFALDIAMRAHK---RVQAAYNDYE 710

Query: 518 PYKLAFY--LYDLA-SVFHGHW 536
            +K+  Y  L++L  S     +
Sbjct: 711 FHKV--YHTLHNLCVSDLSAFY 730


>gi|18311505|ref|NP_563439.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|18146189|dbj|BAB82229.1| probable methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 514

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPIEGFEDKRVYVWIDALLAYVTASKKVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    D+ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEDSRIYLVHGKENIPFHTTMFPAILSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|332795876|ref|YP_004457376.1| leucyl tRNA synthetase, catalytic core [Acidianus hospitalis W1]
 gi|332693611|gb|AEE93078.1| leucyl tRNA synthetase, catalytic core [Acidianus hospitalis W1]
          Length = 920

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 60/195 (30%), Gaps = 27/195 (13%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +  + + +    +      +   +  +  K  I         PMH+GH R  V  D  A 
Sbjct: 1   MDFNAIAEKWQKVWEEKGIFEAKVDERKKKYFITVPFPYTNSPMHIGHGRTYVTADIYAR 60

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
            M   GY V   +     G  I ++A         A+   D D+   ++  VY       
Sbjct: 61  YMRMKGYNVLFPFAFQFTGTPILSVA--------DAIKRGDQDI-IDFFKNVY------- 104

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMK-IIRDDLKALNIQHDIFISEDDFHRGDPS 271
                        EEK   +   Y +    K  +    KA+ +  D   S         +
Sbjct: 105 ----------EIDEEKIKDLSDPYKLAEYFKQEMEKTAKAIGLSVDWRRSFTTVDDRFAA 154

Query: 272 PIRDIIDNLARQGYV 286
            I+     L  +G +
Sbjct: 155 FIQWQFKKLKDKGKL 169


>gi|315452862|ref|YP_004073132.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131914|emb|CBY82542.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 864

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 64/214 (29%), Gaps = 15/214 (7%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S L K    I      +  +         I     N TG +H+GH     + D L    
Sbjct: 7   DSALEKHFYQICQDRGYFEVDSDSTKPPFAIIMPPPNVTGRLHMGHALTLSLQDILVRFK 66

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY V  +  ++ AG  I T  +       Q +   +           ++K V  E  
Sbjct: 67  RMDGYRVLYQPGLDHAG--IATQNVVEKQLLAQGIKKEEIG------REAFVKKV-WEWK 117

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD---- 269
           +    +++   +E  +         +M   +   +K A     D  +   D +  +    
Sbjct: 118 ESCGGQIVEQMQELGISCAWSRLRFSMDAGLERAVKIAFKTWFDQGLIVQDTYMINWCCK 177

Query: 270 PSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKC 302
              + DI ++     G +Y       +       
Sbjct: 178 DGALADIEVEYEQEAGKLYYLRYLLERGGEVVVA 211


>gi|300703295|ref|YP_003744897.1| isoleucine--tRNA ligase [Ralstonia solanacearum CFBP2957]
 gi|299070958|emb|CBJ42266.1| Isoleucine--tRNA ligase [Ralstonia solanacearum CFBP2957]
          Length = 959

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 78/239 (32%), Gaps = 27/239 (11%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDV 320
            H   P  +  +   + + G      L P +    +    + + D   + F S      V
Sbjct: 506 LHPRTPELLEQVAQRIEKSGVEAWQALDPRELLGDEADLYEKNRDTLDVWFDSGTTHWHV 565

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
            R      GS+     D A  +    R  D  +Y+ GSD   G+       A+ +  K  
Sbjct: 566 IR------GSHAADLYD-ASAELADGRLAD--LYLEGSDQHRGWFHSSLLTASMLYGKPP 616

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L         DG   KMSK  G+ I  + +  ++G++ +R  +     S  L    
Sbjct: 617 YKALLTHGF---TVDGEGRKMSKSIGNTIAPQEIAGKMGAEIIRLWVAATDYSGELAISD 673

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +K   +         +Y R R+  R       D D          Q  E D   + L
Sbjct: 674 EILKRVVE---------SYRRIRNTLRFLLANLTDYDHAKHALPA-EQWLEIDRYAVAL 722


>gi|295085448|emb|CBK66971.1| glutamyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 505

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGECGPYRQSERREIYKKYVQVLLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R      ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLIMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +  G  ++I   
Sbjct: 168 DVHVNDLIRGEVIINSSILD---DKVLYKSADELPTYH---LANIVDDHLMGVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|163793116|ref|ZP_02187092.1| Valyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181762|gb|EDP66274.1| Valyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 888

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 33/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP+ +   L         +  ++        I     N TG +H+GH     V D L 
Sbjct: 5   TYSPAEVEAKLYDRWEKSGAFACDVASNAAPYTIMMPPPNVTGSLHMGHALTFTVQDILT 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G                           + AL+   +D        V  +++  
Sbjct: 65  RYQRMTG---------------------------RDALWQPGTDHAGIATQMVVERNLAA 97

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  D+      +   + ++  + ++  ++    I + L+ L    D          G  +
Sbjct: 98  EGVDR-----RDLGRDAFIEKIWEWKAESG-GTIVNQLRRLGASPDWARERFTMDEGLSA 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L ++G +Y            Q    D +
Sbjct: 152 AVRRVFVQLYKEGLIYRDKRLVNWDPKFQTAISDLE 187


>gi|54308069|ref|YP_129089.1| glutamyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|67461772|sp|Q6LTT8|SYE_PHOPR RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|46912495|emb|CAG19287.1| putative glutamyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 474

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 91/279 (32%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLFA---KHMGGEFVLR--IED--TDLERSTQEAIDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y          +L D+         E+K       Y  +A++  +R++
Sbjct: 61  MEWLGMDWDEGPYYQTKRFDRYNQLVDQL------LAEDKAYKC---YCPKALLDELREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++     +       + +   D           +      PK  T    D  R +
Sbjct: 112 QMAAGVKPRYDANHPKIVAANAAATED---------SAFCIRFRNPKEGTVVFEDKVRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 163 IEIANSELD---DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        + L  DG   K+SKR G  
Sbjct: 215 NIYKAIGAPVPEFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|88801839|ref|ZP_01117367.1| isoleucyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782497|gb|EAR13674.1| isoleucyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 1135

 Score = 42.6 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSKR G+       + 
Sbjct: 643 GVDQTRGWFYTLHAIATMVFDSVAYKNVVSNGLV---LDKNGHKMSKRLGNATDPFTTLA 699

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
             G+D+ R+ M+   N  + L FD   ++E  ++
Sbjct: 700 TYGADATRWYMISNANPWDNLKFDLEGIEEVKRK 733


>gi|332307895|ref|YP_004435746.1| valyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175224|gb|AEE24478.1| valyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 921

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 60/241 (24%), Gaps = 41/241 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + +       +   +     G+G    I     N TG +H+GH     + DTL 
Sbjct: 4   TFSPQNIEQQCYQAWENNGYF--KASGEGQPYCILLPPPNVTGSLHMGHGFQQTIMDTLT 61

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G     +   + AG   Q+      V  R   A      DL             
Sbjct: 62  RYHRMKGDNTLWQCGTDHAGIATQM------VVERQLNAQGKTRHDLGRDA--------- 106

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                DK                            I   ++ L    D            
Sbjct: 107 ---FVDKIWDWKKESG-----------------GNITQQMRRLGTSPDWDREVFTMDDDL 146

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + ++   L  +G +Y G               D + L          +  PL  +DG
Sbjct: 147 SEAVNEVFVRLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEENGFMWHMRYPL--ADG 204

Query: 330 S 330
           +
Sbjct: 205 T 205


>gi|323690917|ref|ZP_08105209.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323505042|gb|EGB20812.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 657

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 60/420 (14%), Positives = 124/420 (29%), Gaps = 73/420 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    ++ D++A      G++V  +   ++ G +I   A   
Sbjct: 12  TTAIAYTSGKP----HIGNTYEIILADSIARYKREQGFDVRFQTGTDEHGQKIELKAEEA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               Q+ +    + +         +  +     DK+        EE+   I K    +  
Sbjct: 68  GVTPQEFVDGVAAQIKS-------IWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKG- 119

Query: 242 MKIIRDDLKALNIQHDIFIS---------------------EDDFHRGDPSPIRDIIDNL 280
             I +   + L                              E+ +        + +ID++
Sbjct: 120 -DIYKGHYEGLYCTPCESFWTSSQVTDGKCPDCGRPVVPAKEEAYFFKMSKYAQQLIDHI 178

Query: 281 AR----------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                       +  +    L P      Q   + R    +   +  D      +  D  
Sbjct: 179 NEHPEFIQPVSRKNEMMNNFLLP----GLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDAL 234

Query: 331 YTYFAADLAY-----FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQIN 382
             Y    L Y         + + +   ++++G D    + R   +      ++ +     
Sbjct: 235 TNYITG-LGYDCDGNHGELFGKYWPADLHLIGKD----IIRFHTIYWPIFLMALELPLPK 289

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
            +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L            +  
Sbjct: 290 QVFGHPWLLQGDG---KMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWEL 346

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQESEFDTS 494
           + E+   +    +     R  S+  +        K    + D DL    V+      D  
Sbjct: 347 MVERMNSDLANILGNLVNRTISMSNKYFGGEVADKGAAGEADADL-KATVLEAVKRVDEK 405


>gi|313895895|ref|ZP_07829449.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975320|gb|EFR40781.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 843

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +      I      Y         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 26  PQEIEAKWQEIWDKEHSYRTQQDPAKPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFR 85

Query: 155 AFSGYEV 161
             +GY V
Sbjct: 86  TMAGYNV 92


>gi|299134230|ref|ZP_07027423.1| isoleucyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590977|gb|EFI51179.1| isoleucyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 991

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 33/183 (18%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           R       K  +        G +H+GH    ++ D +       GY+     Y+      
Sbjct: 50  REQSKDRPKFVLHDGPPYANGNIHIGHALNKILKDLVTKSQQMLGYDS---NYVPGWDCH 106

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              +   +   Y+    N D+                              P  ++    
Sbjct: 107 GLPIEWKIEEGYRAKGKNKDA-----------------------------VPINEFRKEC 137

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           + ++ Q  + I R++ K L +  D        +    + I   I   A  G +Y G  P 
Sbjct: 138 RAFA-QKWVDIQREEFKRLGVIGDWAHPYTTMNFAAEAQIAREIMKFAANGLLYRGSKPV 196

Query: 294 PKS 296
             S
Sbjct: 197 MWS 199


>gi|168205783|ref|ZP_02631788.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662677|gb|EDT15360.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 514

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPIEGFEDKRVYVWIDALLAYVTASKKVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    D+ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|139438655|ref|ZP_01772139.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
 gi|133775735|gb|EBA39555.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
          Length = 533

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 111/371 (29%), Gaps = 75/371 (20%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI------------ 174
           +V+A+P    H+G     ++ D  A     +GY V     +++ G ++            
Sbjct: 16  YVNADP----HLGTAYSTIIADVQARYRRSAGYNVKFLTGMDEHGEKVAEAAAKHNMTPQ 71

Query: 175 ---------------------NTLALSVFWRYQQALYNNDSDLPEGYY--PGVYLKHVGK 211
                                +    +   R   A+      + E  Y   G Y      
Sbjct: 72  EWTDSQAPHFKELWNKLEISNDDFIRTTEPRQHHAVQYLWERMKESGYLYKGSYDGWYCV 131

Query: 212 ELADKYSSELLNFPEEKW--------------LPIVKDYSVQAMMKIIRDDLKALNIQHD 257
                ++   +   +E++              L  V++ S    +   +D L  L  +H 
Sbjct: 132 PDETYFTDTQVQKGDEEYGSVGQHLCPDCHRPLERVQEESYFFKLSAFQDKLLKLYDEHP 191

Query: 258 IFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            F+          S +   +++L+  +     GI  P           D       +   
Sbjct: 192 DFVEPAFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDEGHVTYVWFDALLNYMTAVGY 251

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G D D                 A    ++   F     ++G D    +     A+  A+ 
Sbjct: 252 GVDTDEAR--------------AELSYRWPAQFH----IVGKDIIRFHCVIWPAMLMAIG 293

Query: 376 EKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE 433
           E   +       L VR    G   KMSK  G+ I  + V+D +G +  R + M       
Sbjct: 294 EALPEHVFAHGFLTVRNAETGKAEKMSKSRGNAIAPQDVIDMLGVEGYRYYFMTDVVPGT 353

Query: 434 LLDFDFCKVKE 444
                F ++++
Sbjct: 354 DGAISFDRMEQ 364


>gi|323483574|ref|ZP_08088959.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum
           WAL-14163]
 gi|323403130|gb|EGA95443.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum
           WAL-14163]
          Length = 657

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 61/420 (14%), Positives = 124/420 (29%), Gaps = 73/420 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
              I + S  P    H+G+    V+ D++A      G++V  +   ++ G +I   A   
Sbjct: 12  TTAIAYTSGKP----HIGNTYEIVLADSIARYKREQGFDVRFQTGTDEHGQKIELKAEEA 67

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
               Q+ +    + +         +  +     DK+        EE+   I K    +  
Sbjct: 68  GVTPQEFVDGVAAQIKS-------IWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKG- 119

Query: 242 MKIIRDDLKALNIQHDIFIS---------------------EDDFHRGDPSPIRDIIDNL 280
             I +   + L                              E+ +        + +ID++
Sbjct: 120 -DIYKGHYEGLYCTPCESFWTSSQVTDGKCPDCGRPVVPAKEEAYFFKMSKYAQQLIDHI 178

Query: 281 AR----------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
                       +  +    L P      Q   + R    +   +  D      +  D  
Sbjct: 179 NEHPEFIQPVSRKNEMMNNFLLP----GLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDAL 234

Query: 331 YTYFAADLAY-----FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQIN 382
             Y    L Y         + + +   ++++G D    + R   +      ++ +     
Sbjct: 235 TNYITG-LGYDCDGNHGELFGKYWPADLHLIGKD----IIRFHTIYWPIFLMALELPLPK 289

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
            +      L  DG   KMSK  G+ +    +VD  G D+VR+ +L            +  
Sbjct: 290 QVFGHPWLLQGDG---KMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWEL 346

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQESEFDTS 494
           + E+   +    +     R  S+  +        K    + D DL    V+      D  
Sbjct: 347 MVERMNSDLANILGNLVNRTISMSNKYFGGEVADKGAAGEADADL-KATVLEAVKRVDEK 405


>gi|257899913|ref|ZP_05679566.1| glutamyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837825|gb|EEV62899.1| glutamyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 486

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 92/295 (31%), Gaps = 34/295 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A              + ND G  I  +  +   R  + 
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR-------------H-ND-GDFIIRIEDTDQKRNIE- 52

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIR 246
                S L    + G+       E   +Y     +  +E + P++     S +A      
Sbjct: 53  -DGEKSQLENLAWLGMD-WDESPENPGEYGPYRQSERKEIYQPLIDQLLASNRAYKCYCT 110

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +      E   + G   +   +       QG         P++      DM 
Sbjct: 111 EEELEAEREAQRVRGEMPHYAGTCANLTPEEQAEKEAQGLESVVRFRVPRNTEYAFTDMV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           +  + F S  +G D    + K DG  TY       F    +     + +V+ G DH    
Sbjct: 171 KGAISFESDNIGGDF--VIQKRDGMPTYN------FAVAVDDHLMKITHVLRGDDHIANT 222

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   +  A              +  +       K+SKR    +       E+G 
Sbjct: 223 PKQLMIYEAFGWTPPTFGH----MTLIINSETGKKLSKRDESILQFIEQYRELGY 273


>gi|269792595|ref|YP_003317499.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100230|gb|ACZ19217.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 927

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 17/184 (9%)

Query: 338 LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           LA  + + E G+   +Y+ GSD   G+ +       A   K     VL    +    DG 
Sbjct: 545 LAVLETRKELGWPADMYLEGSDQHRGWFQTSLLTGIATRGKAPFQQVLTHGFIV---DGK 601

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+ ++ + V+D+ G+D +R  +        +      +K   +         
Sbjct: 602 GRKMSKSLGNVVSPQEVIDKYGADILRLWVASTDYRGDVRISDRILKNLVE--------- 652

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           +Y R R+  R       D D     ++ IP+       +   +  L +    +       
Sbjct: 653 SYRRIRNTARFILGNLSDFD---PAKHRIPRTEMLPFDKWA-VSRLQDLIEKVTRGYEEY 708

Query: 517 EPYK 520
           E + 
Sbjct: 709 EFHV 712


>gi|225573670|ref|ZP_03782425.1| hypothetical protein RUMHYD_01866 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038963|gb|EEG49209.1| hypothetical protein RUMHYD_01866 [Blautia hydrogenotrophica DSM
           10507]
          Length = 494

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 110/291 (37%), Gaps = 34/291 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D    +   L +      + 
Sbjct: 19  APSPTGKMHVGNLRTALYAYLIA---KHEGGDFILRIEDTDQERLMEGALDIIYRTLEKT 75

Query: 188 ALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L +++    +G + G Y++       L  KY+ +L+   +  +       ++++M + +
Sbjct: 76  GLVHDEGPDKDGGF-GPYVQSERNASGLYLKYAQQLVEQGD-AYYCFCDKETLESMRREV 133

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                A+  +  + ++            ++ ++     G  +      P   TT   D+ 
Sbjct: 134 AGKEIAIYDKRCLKLT------------KEEVEAKLAAGEPHVIRFNMPTEGTTTFHDVI 181

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +   +  +    D  L+K+DG  TY   + A     +  G  ++  V G+++     
Sbjct: 182 YGDITVNNEEL---EDLILIKTDGYPTY---NFANVIDDHLMGITHV--VRGNEYLSSAP 233

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A   +      + C L+    +    K+SKR+G   +   ++++
Sbjct: 234 KYNRIYEAFGWEIP--TYVHCPLIT---NEEHQKLSKRSGHS-SYEDLIEQ 278


>gi|254501366|ref|ZP_05113517.1| leucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222437437|gb|EEE44116.1| leucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 874

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +     +    N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 8   AREVEARWQKTWNDKDVFVTHNDDPRDKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARF 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KRAKGFNV 74


>gi|126733398|ref|ZP_01749145.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716264|gb|EBA13128.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 1045

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  ++ AV E+     V L +LV   RD    KMSK  G+ I    ++D  G+D++
Sbjct: 657 WVARMMMMSQAVLEQDPFHTVYLHQLV---RDAKGEKMSKTKGNVIDPLDMIDAYGADAL 713

Query: 423 RF 424
           RF
Sbjct: 714 RF 715



 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 58/228 (25%), Gaps = 44/228 (19%)

Query: 92  YLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
                     +  +  + G         +     I     N TG +HVGH     + D L
Sbjct: 23  TFDAKTAEPRIYQMWENAGAFKAGANASRDETFCIMLPPPNVTGHLHVGHAFNHTIMDML 82

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  GY+   +  ++ AG     +                               V 
Sbjct: 83  TRWKRMQGYDTLWQPGLDHAGIATQLM-------------------------------VE 111

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           K+LA K   +      + +L  V ++  +A    I    + L    D   S       + 
Sbjct: 112 KDLAAKGQPKRTELGRDTFLEKVWEWK-EANGGQIEQQARRLGDSMDWSRSAFTMSGAES 170

Query: 271 -----------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                        +  +   +  +G +Y G          +    D +
Sbjct: 171 APAGEKPGNFHDAVLKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLE 218


>gi|146304825|ref|YP_001192141.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|187631639|sp|A4YIG5|SYC_METS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145703075|gb|ABP96217.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 465

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 51/393 (12%), Positives = 118/393 (30%), Gaps = 53/393 (13%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
           G         +   V +          +H+GH R  V  D ++  +   GY V R   I 
Sbjct: 8   GKRLQSFEPHEPNTVKMYVCGPTVYDEVHIGHGRTFVAFDAMSRYLRVKGYNVVRVQNIT 67

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           D   +I         R     +N  S+    YY   YL+H+G           +    ++
Sbjct: 68  DIDDKIIN-----KARELGKSWNEVSE----YYSKSYLEHIGALKVKIDMHPKVTTHIKE 118

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDI-----FISEDDFHRGDPSPIRDIIDNLAR- 282
            +  V     Q ++      +   ++  D+     +    +  + +     +I+      
Sbjct: 119 IIDFV-----QRLIDSGHAYVANGSVYFDVDTYPGYGELSNVKKEEWDQGEEIVKEKRHP 173

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
             +       P +          R       + +             S  Y    +    
Sbjct: 174 YDFALWKAYKPGEPYWESPWGKGRPGWHIECSTM-------------STRYLGTKIDIHG 220

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMS 401
              +  F             + +   A   ++      +  + +  L          KMS
Sbjct: 221 GGMDLVF------------PHHENERAQTESLTGSTWVKYWMHVAFLTI-----RKEKMS 263

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ + L+  + + G  ++R+  L  +    +++    +++ S+   +  ++ A +  
Sbjct: 264 KSKGNIVPLKEALSKYGPSTLRYWFLSSQYRNPIEYSEEILEQSSRS--LQRLKDAISVL 321

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           R I ++    +   +       ++   S FD  
Sbjct: 322 RKIIQKGPAHYAKEEDVKVQEEIVRAISRFDEH 354


>gi|270294773|ref|ZP_06200974.1| glutamyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274020|gb|EFA19881.1| glutamyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 508

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL   +  ++       ++A    I   
Sbjct: 68  GIPFDEGVSFGGDHGPYRQSERREIYKKYVQILLEAGK-AYIAFDTPEELEAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L   G  Y        ++     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLPKEEVDALIAAGKQYVVRFKIEPNEDVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|260771002|ref|ZP_05879931.1| valyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260614239|gb|EEX39429.1| valyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 953

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQDLYKTWEEKGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RCQRMKGKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++   I +  L+ L    D          G   
Sbjct: 93  KIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQ-LRRLGASVDWDRERFTMDDGFYK 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L +   +Y G               D +
Sbjct: 152 AVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|227357026|ref|ZP_03841397.1| valyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227162829|gb|EEI47789.1| valyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 962

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 15  TYNPTEIEQPLYQHWEKNGYFKANGDTSKESFCIVIPPPNVTGSLHMGHAFQQTIMDTMI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 75  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 103

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I + ++ L    D          G   
Sbjct: 104 KIAAEEGKNRHDYGRDAFIDKIWEWKAESG-GNISNQMRRLGNSVDWDRERFTMDEGLSK 162

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G               D +
Sbjct: 163 AVKEAFVRLHKEDLIYRGKRLVNWDPKLHTAISDLE 198


>gi|197287274|ref|YP_002153146.1| valyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|194684761|emb|CAR46786.1| valyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 962

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  N         I     N TG +H+GH     + DT+ 
Sbjct: 15  TYNPTEIEQPLYQHWEKNGYFKANGDTSKESFCIVIPPPNVTGSLHMGHAFQQTIMDTMI 74

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 75  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 103

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  + ++  ++    I + ++ L    D          G   
Sbjct: 104 KIAAEEGKNRHDYGRDAFIDKIWEWKAESG-GNISNQMRRLGNSVDWDRERFTMDEGLSK 162

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G               D +
Sbjct: 163 AVKEAFVRLHKEDLIYRGKRLVNWDPKLHTAISDLE 198


>gi|159903416|ref|YP_001550760.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687104|sp|A9BAE4|SYL_PROM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|159888592|gb|ABX08806.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 872

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 26/121 (21%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  +   +SG+   R             +   P+G +H+GH R  V+ D +A +    G
Sbjct: 25  EKWQNEWKISGLYKTREPKEDQKTFYALSMFPYPSGNLHMGHVRNYVITDVIARVHRMKG 84

Query: 159 Y--------------------------EVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           +                          ++  E  I+   +Q++ L LS+ W  +Q    +
Sbjct: 85  FSVLHPMGWDAFGLPAENAAIERNIQPDIWTEKNISHMRSQLDRLGLSIDWDREQTTSKS 144

Query: 193 D 193
           +
Sbjct: 145 E 145


>gi|332365884|gb|EGJ43641.1| glutamate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 485

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 96/293 (32%), Gaps = 43/293 (14%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D          
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVED--------GE 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  +  + PE +    Y +    ++  KY +ELL+        +     V 
Sbjct: 57  RSQLENLRWLGIDWDESPETHKN--YRQSERLDIYQKYVNELLDKG------LAYKSYVT 108

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                   + +    +   +I+E      +       I      G +    L   ++   
Sbjct: 109 EEELAAERERQEAAGETPRYINEFLGMSEEEKAAY--IAEREAAGIIPTVRLAVNEAGVY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM + ++ F    +G   D  + K DG  TY   + A     +     ++I   G D
Sbjct: 167 KWTDMVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVIDDHLMEISHVIR--GDD 219

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           H     +   V  A+  +  +       +  +       K+SKR  + +    
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|163759464|ref|ZP_02166549.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283061|gb|EDQ33347.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 947

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 115/366 (31%), Gaps = 70/366 (19%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W+  ++ + +   +               +F+ E D      + I+  I +        
Sbjct: 441 EWMENIQPWCISRQLWWGHQIPAWYGPDGQVFV-EKDEETALEAAIQHYIAHEGPWKAWV 499

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRS------TMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           E  L   K       D D     F S      T+   D    L +      Y+  D+   
Sbjct: 500 EDKLENFKPGEILIRDEDVLDTWFSSALWPFSTLGWPDKTPELKR------YYQTDV--- 550

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                 GFD +I+         V R+  +     +++    V +  LV   RD    KMS
Sbjct: 551 ---LVTGFD-IIFFW-------VARMMMMGLHFMDEEPFHTVYVHALV---RDKNGAKMS 596

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           K  G+ I    ++DE G+D++RF + +       +  D  ++                 +
Sbjct: 597 KSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPSRIAGYRNFGT---------K 647

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE-------NAT 513
             +  R A      LD    P +     + +  +EL      AE    IE       +A 
Sbjct: 648 LWNATRFADMNGAVLDPAFDPASAKLTINRWILTELT--RTAAEVREAIEGYKFNEASAA 705

Query: 514 IAQEP-YKLAF-YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
           + +    +L   YL  L  VF+G                +       R       A ++ 
Sbjct: 706 LYRFVWNQLCDWYLELLKPVFNG---------------EDEAAKVEAR----ACAAYVLA 746

Query: 572 SGLNII 577
             + ++
Sbjct: 747 ESVKLL 752



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 33/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D +       G +V  +  ++ AG     +            
Sbjct: 45  PNVTGSLHMGHALNNTLQDIMVRYQRMRGRDVLWQPGMDHAGIATQMV------------ 92

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                              V ++LA+K      +   E ++  + ++  Q+   +I + L
Sbjct: 93  -------------------VERQLAEKQI-HRRDIGREAFVEKIWEWKDQSG-GMIFNQL 131

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           + L    D          G    + ++   L +QG +Y+ 
Sbjct: 132 RRLGASCDWSRERFTMDEGLSKAVLEVFVTLYKQGLIYKD 171


>gi|33862987|ref|NP_894547.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|48428527|sp|Q7TV01|SYL_PROMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634904|emb|CAE20890.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 39/201 (19%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------- 152
           +     +  G++          +     +   P+G +H+GH R  V+ D +A        
Sbjct: 26  RWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQRMRGD 85

Query: 153 -LMAFSGYEVT----------REYYINDAGA--------QINTLALSVFWRYQQALYNND 193
            ++   G++            R     D           Q++ L LS+ W  QQA  + D
Sbjct: 86  AVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQD 145

Query: 194 S---------DLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWL--PIVKDYSVQA 240
                     +L  G         V  +  DK   ++E ++     W    +V+   ++ 
Sbjct: 146 YYRWTQWLFLELFAGGLAYQKEATVNWDPVDKTVLANEQVDGEGRSWRSGALVEQRQLKQ 205

Query: 241 MMKIIRDDLKALNIQHDIFIS 261
               I D   AL    D    
Sbjct: 206 WFLRITDYADALIDDLDELTG 226


>gi|85709546|ref|ZP_01040611.1| glutamyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688256|gb|EAQ28260.1| glutamyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 441

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 86/282 (30%), Gaps = 44/282 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG+ R A+    +A     SG                 T  L +       
Sbjct: 7   APSPTGRLHVGNIRTALHNWMIA---EKSG----------------GTFVLRI------- 40

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D++  +  Y       +     +    E  +   + +    +       +    + 
Sbjct: 41  -DDTDAERSKEEYVEAIRADLAWLGIEADREERQSERLDAYEAAFERLREAGRIYPAYET 99

Query: 249 LKALNIQHDIFISEDD---FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            + L ++  + +       + RG      +       QG            +  +  D  
Sbjct: 100 QQELELKRKVLLGRGKPPIYDRGALELTDEERAAKKAQGIAPHWRFKLDHDQPIEWEDGV 159

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           R +  F    + D     + ++DGS+ Y            + G   ++   G DH     
Sbjct: 160 RGKQKFDPAQLSDP---VIRRADGSWLYMLPST---VDDIDMGITQVLR--GEDHVSNTA 211

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
               +  A+  +         E + + ++G   K+SKR G  
Sbjct: 212 VQIQMFTAMGAEPPAFAH---EALLVGKEG---KLSKRLGSL 247


>gi|320529478|ref|ZP_08030564.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138272|gb|EFW30168.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 849

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +      I      Y         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 32  PQEIEAKWQEIWDKEHSYRTQQDPAKPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFR 91

Query: 155 AFSGYEV 161
             +GY V
Sbjct: 92  TMAGYNV 98



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 12/129 (9%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +  ++   A  +   +   N+L   +V   +DG   KMSK  G+ ++   ++D  G+D+ 
Sbjct: 576 FFTKVLRDAEMLDFDEPFTNLLTQGMV--IKDGA--KMSKSLGNVVSPEEIIDRYGADTA 631

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R  +L+    E  D D+    +Q  E    ++    +R   I  Q ++            
Sbjct: 632 RLFILFAAPVER-DLDW---SDQGVEGAFRFL----SRVWRILGQFEETIRSASDAYDTD 683

Query: 483 NVIPQESEF 491
            +  +E+E 
Sbjct: 684 ALSTEETEL 692


>gi|307718100|ref|YP_003873632.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531825|gb|ADN01359.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 809

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +           L+ + + L  DG   KMSK  G+
Sbjct: 538 LYVGGAEHAVLHLLYARFWHKVLYDLGLVNTDEPFMRLVNQGMILGEDGE--KMSKSRGN 595

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +++E G+DS+R
Sbjct: 596 VVNPDDIIEEYGADSLR 612


>gi|237738153|ref|ZP_04568634.1| glutamate-tRNA ligase [Fusobacterium mortiferum ATCC 9817]
 gi|229420033|gb|EEO35080.1| glutamate-tRNA ligase [Fusobacterium mortiferum ATCC 9817]
          Length = 509

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 132/409 (32%), Gaps = 62/409 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTG  HVG    A+     A+      ++     +  R       G++   +  ++
Sbjct: 14  IAPSPTGDPHVGTAYIALFNLAFANSNNGEFILRIEDTDQNR----YTEGSE-QMIFDAL 68

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W         D     G   G Y +     L   Y+ +L+      +        +  +
Sbjct: 69  HWLGLNYAEGPDV----GGEYGPYRQSERFHLYGDYAKKLVEQGG-AYYCFCTQDRLDKL 123

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  +   KA                   S   + I      G  Y   L  P    T  
Sbjct: 124 RERQKAMGKAPGYDGHC-----------RSLTPEEIQAKLDAGEPYVIRLKMPYEGETII 172

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  ++F +  +    D+ LLK+DG  TY    LA     +  G  ++I     +  
Sbjct: 173 HDRLRGDIVFENNKID---DQVLLKADGFPTYH---LANVVDDHLMGITHVIR--AEEWI 224

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGS 419
               +   +  A   ++ +   +      L R+    K+SKR  + ++L    +E  +  
Sbjct: 225 ASTPKHIQLYKAFGWEQPEFIHM-----PLLRNADRTKISKRK-NPVSLIWYKEEGYLKE 278

Query: 420 DSVRFMMLW----RKNSELL-------DFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQ 467
             V F+ L      +N E+        +F+  KV   S   PVF  V+  +     +  +
Sbjct: 279 GIVNFLGLMGYSFGENKEIFSLQEFVDNFNIDKV---SLGGPVFDLVKLGWVNNHHMRMK 335

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
             +   DL    F +     E   +     L+  +     ++  +    
Sbjct: 336 DINELTDLAIPFFRQLGYVGEEVSEHEYRALVKIV----EILRESAQTL 380


>gi|319784275|ref|YP_004143751.1| isoleucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170163|gb|ADV13701.1| isoleucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 987

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 94/264 (35%), Gaps = 30/264 (11%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLF----RSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           V + I+   + +          +  F     ++     +D   +  D   T+        
Sbjct: 545 VNQRIMDAFEKEGADAWFAAGAKERFLGNHDASKWKQVMDILDVWFDSGSTHAFT----L 600

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIK 399
           + + +  +   +Y+ GSD   G+      +  +   + +A  + ++     +  DG   K
Sbjct: 601 EDRPDLKWPADVYLEGSDQHRGWFHSS--LLESCGTRGRAPYDTVVTHGFTMDEDGR--K 656

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V+ + G+D +R  ++    +     D    K   + N       AY 
Sbjct: 657 MSKSLGNTVVPQDVIKQSGADILRLWVV----TTDYWEDQRLGKNVLQTNID-----AYR 707

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           + R+  R         D +  P   +P+       E  ++  LAE   V+ +   A E  
Sbjct: 708 KLRNTIRWMLGTLAHDDGEEVPLEKMPEL------ERLMLHRLAELDEVVRSGYDAFEFK 761

Query: 520 KLAFYLYD-LASVFHGHWSHGREN 542
           ++   L D +       +   R++
Sbjct: 762 RITRMLLDFMVVELSAFYFDIRKD 785


>gi|323345686|ref|ZP_08085909.1| valine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093800|gb|EFZ36378.1| valine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 878

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 70/224 (31%), Gaps = 30/224 (13%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
             WL  +KD+ +   +                      ++         ++   A +  V
Sbjct: 391 RHWLENIKDWCISRQLWWGHRIPA--------------YYFTIAGKREYVVAETAEKALV 436

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
                    +KT  + D D     F S +       P+   DG       ++ Y+    +
Sbjct: 437 EAQKRDATLTKTDLEQDEDCLDTWFSSWLW------PISVFDGINNPNNKEINYYYPTSD 490

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
                   V G D   +      + A    +  Q+         + RD +  KMSK  G+
Sbjct: 491 L-------VTGPD-IIFFWVARMIMAGYEYR-GQMPFKHVYFTGIVRDKLGRKMSKSLGN 541

Query: 407 FITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFCKVKEQSKEN 449
                 ++D+ G+D VR  MML       + FD    ++    N
Sbjct: 542 SPDPLMLIDKYGADGVRMGMMLSAPAGNDILFDESLCEQGRNFN 585


>gi|299065945|emb|CBJ37126.1| Isoleucine--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 960

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 78/239 (32%), Gaps = 27/239 (11%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDV 320
            H   P  +  +   + + G      L P +    +    + + D   + F S      V
Sbjct: 507 LHPRTPELLEQVAQRIEKSGVEAWQTLDPRELLGDEADLYEKNRDTLDVWFDSGTTHWHV 566

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKA 379
            R      GS+     D A  +    R  D  +Y+ GSD   G+       A+ +  K  
Sbjct: 567 IR------GSHAADMYD-ASAELPEGRLAD--LYLEGSDQHRGWFHSSLLTASMLYGKPP 617

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L         DG   KMSK  G+ I  + +  ++G++ +R  +     S  L    
Sbjct: 618 YKALLTHGF---TVDGEGRKMSKSIGNTIAPQEIAGKMGAEIIRLWVASTDYSGELAISD 674

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             +K   +         +Y R R+  R       D D          Q  E D   + L
Sbjct: 675 EILKRVVE---------SYRRIRNTLRFLLANLTDYDHAKHALPP-EQWLEIDRYAVAL 723


>gi|224373264|ref|YP_002607636.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589648|gb|ACM93384.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 635

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 98/320 (30%), Gaps = 36/320 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    ++ D +A      G +       ++ G +I   A       ++         
Sbjct: 22  HIGHAYTTIIADMVARYSRLKGIDTFFLTGTDEHGQKIEEAAKKRGKSPKEYADEISGKF 81

Query: 197 PE--GYYPGVYLKHV-GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                 +   Y K +   + A K   +       K   I KDY            +    
Sbjct: 82  KALWDEFEISYDKFIRTTDEAHKKGVQKAFLDMYKKGDIYKDYYEGHYCVSCESFVAPSQ 141

Query: 254 IQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           + +D            I E+ +          ++D L  +  +          +  ++  
Sbjct: 142 LVNDELCPDCGKPTRIIKEESYFFRLSKYQDQLLDWLKNKKPILPEAKANEVIRFVEEGL 201

Query: 304 MDRKQL-------LFRSTMVGDDVDRPLLKSDGSYTYFAADLAY---FKCKYERGFDNMI 353
            D           +     + D      +  D  + Y  A L Y        ++ +   +
Sbjct: 202 KDLSITRTSFEWGVKLPPEINDPKHVVYVWLDALFNYLTA-LGYGSENDELVKKYWPAKL 260

Query: 354 YVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +++G D    H+ Y     A   ++  +  ++           RDG   KMSK  G+ I 
Sbjct: 261 HIVGKDILKFHAVY---WPAFLMSIGYELPKVIAAHGWW---TRDGE--KMSKSKGNVIN 312

Query: 410 LRHVVDEVGSDSVRFMMLWR 429
            + V D  G ++ R+ ML  
Sbjct: 313 PKDVADAYGLENFRYFMLRE 332


>gi|89889738|ref|ZP_01201249.1| glutamyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89518011|gb|EAS20667.1| glutamyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 505

 Score = 42.6 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 97/284 (34%), Gaps = 33/284 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP+H+G  R A+     A       ++     +  R  Y+  A   I        
Sbjct: 10  APSPTGPLHIGGVRTALFNYLFAKKHNGTFVLRIEDTDQNR--YVEGAEDYIVNALKWCQ 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
             Y +               G Y +   K +  +Y+   L+  E        D + +   
Sbjct: 68  IPYDEGPGKE-------GDCGPYRQSERKSMYKQYA---LDLIENGAAYYAFDTAQELQT 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R++ +A         +  +      +   D +     +G  Y  I   P+ KT    
Sbjct: 118 A--RENAEAKKETFIYNHNNRNDFTNSLTLSNDEVKERINRGDDYV-IRFKPELKTLHMF 174

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  RK +   ++++    D+ L KSDG  TY    LA     ++    ++I   G +   
Sbjct: 175 DEIRKGIEIDTSLID---DKVLFKSDGMPTYH---LANVVDDHDMKISHVIR--GEEWLP 226

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +     +  +    + +   L   L    +     K+SKR GD
Sbjct: 227 SMALHVLLYESFGWDRPKFAHLPLILKPTGKG----KLSKRDGD 266


>gi|328865666|gb|EGG14052.1| hypothetical protein DFA_11815 [Dictyostelium fasciculatum]
          Length = 1039

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 54/214 (25%), Gaps = 36/214 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     K       S  +          + ++     N TG +H+GH     + D L   
Sbjct: 54  NKYQWWKDNGYFKPSSTKTEDTNNKNKKRFSMVLPPPNVTGSLHIGHALTTTIEDALVRY 113

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               GY+      ++ +G   Q+                                  V K
Sbjct: 114 KRMMGYDTLWVPGLDHSGIATQVA---------------------------------VEK 140

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E+  K      +   EK+L  V  +        I   L+      D   S          
Sbjct: 141 EIMVKQGLSRHDLGREKFLEQVFKW-TDKYSANINTQLEKTGSSLDWSRSVFTLDDKRAL 199

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            ++     L R+G +Y            Q    D
Sbjct: 200 AVQTAFLTLYRRGLIYRSTRLVNWCAQLQSVISD 233


>gi|317476386|ref|ZP_07935635.1| glutamyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907412|gb|EFV29117.1| glutamyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 508

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL+  +  ++       + A    I   
Sbjct: 68  GIPFDEGVSFGGEHGPYRQSERREIYKKYVQVLLDAGK-AYIAFDTPEELDAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L  +G  Y         +     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLSKEEVDALIAEGRQYVVRFKIEPDEDVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|183219687|ref|YP_001837683.1| leucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909823|ref|YP_001961378.1| leucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687774|sp|B0SAB8|SYL_LEPBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687855|sp|B0STJ3|SYL_LEPBP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167774499|gb|ABZ92800.1| Leucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778109|gb|ABZ96407.1| Leucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 867

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    +   +           L+ + + L  D    KMSK  G+
Sbjct: 588 VYVGGAEHAVLHLLYSRFWHKILFDLGHVSTPEPFKKLVHQGLILGED--KGKMSKSRGN 645

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            +    VV E G+D++R   +
Sbjct: 646 VVNPDDVVSEFGADTLRLFEM 666


>gi|160937871|ref|ZP_02085229.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439097|gb|EDP16851.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
           BAA-613]
          Length = 469

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 46/362 (12%), Positives = 104/362 (28%), Gaps = 38/362 (10%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DT+     + GY+V       D   +I   A+             D+D
Sbjct: 35  IHIGNARPMIVFDTVRRYFEYKGYDVRYVSNFTDVDDKIIKKAIE---------EGVDAD 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                Y     K +        +       E   +       +Q ++      +      
Sbjct: 86  TVSRRYIEECKKDMAAMNVKPATVHPQATQEICGM----LEMIQTLIDKNHAYVAGDGTV 141

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--- 312
           +    S  ++ +     + ++           E     P      K   + +        
Sbjct: 142 YFRTGSFKEYGKLSHKNLDELQSGFREIKVTGEEGKEDPNDFVLWKPKKEGEPFWESPWC 201

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
               G  ++  ++       Y    +       +  F +        H   + + E    
Sbjct: 202 DGRPGWHIECSVMSKR----YLGEQIDIHAGGEDLIFPH--------HENEIAQSECAND 249

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                    N     +   + +    KMSK  G+F T+R + ++     +RF ML     
Sbjct: 250 K--------NFATYWMHNAFLNIDNKKMSKSLGNFFTVREISEKYDLQVLRFFMLSAHYR 301

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             L+F    +  ++ +N +  +     + R +  +A D                   +++
Sbjct: 302 SPLNFSADLM--EASKNGLERILTCVEKLRDLEAKASDSSKTAGEQATMEEADKLRGKYE 359

Query: 493 TS 494
            +
Sbjct: 360 EA 361


>gi|153813240|ref|ZP_01965908.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
 gi|149830653|gb|EDM85744.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
          Length = 469

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 48/376 (12%), Positives = 109/376 (28%), Gaps = 62/376 (16%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  ++ DT+   + + GY+V    Y+++     + +        +       ++
Sbjct: 35  IHIGNARPMIIFDTVRRYLEYKGYDV---NYVSNFTDVDDKII------KKAIEEGVSAE 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK---AL 252
                Y     K +        ++  L   E        D  +  +  +I  +     A 
Sbjct: 86  EISQRYIAECKKDMAGMNVKPATTHPLATQE-------IDGMIDMIQTLIDKEYAYPVAD 138

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
              +       ++ +     + D+           E     P      K   + +     
Sbjct: 139 GTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVSGEDQKEDPLDFVLWKPKKEGEPFWKS 198

Query: 313 ---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                  G  ++  ++       Y   ++       +  F +        H   + + E 
Sbjct: 199 PWCDGRPGWHIECSVMSKK----YLGEEIDIHAGGEDLVFPH--------HENEIAQSE- 245

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               V   K  ++         + +    KMSK  G+F T+R + ++     +RF ML  
Sbjct: 246 CCNGVPFAKYWMH-------NAFLNIDNRKMSKSLGNFRTVREIGEQYDLQVLRFFMLNA 298

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
                L+F    ++                      + A +   +    L  R       
Sbjct: 299 HYRSPLNFSADLMESS--------------------KNALERITEAAARLRDRQAAATVQ 338

Query: 490 EFDTSELQLIVHLAEY 505
           E    E +L+   A +
Sbjct: 339 EATEDEKKLMQEEAAF 354


>gi|15967084|ref|NP_387437.1| leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302546|ref|ZP_07582303.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307316123|ref|ZP_07595567.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|32171577|sp|Q92KW8|SYL_RHIME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15076357|emb|CAC47910.1| Probable leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306897963|gb|EFN28705.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306903216|gb|EFN33806.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 876

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +   +N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQHQWEAGKVFETKNDDPRDKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYK 67

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 68  RARGFNV 74


>gi|330445334|ref|ZP_08308986.1| glutamyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489525|dbj|GAA03483.1| glutamyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 474

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 78/450 (17%), Positives = 136/450 (30%), Gaps = 81/450 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLYA---KHMGGEFVLR--IED--TDLERSTQEAIDAIMEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   + +  EG Y          E+ D+         E+K       Y  + ++  IR++
Sbjct: 61  MEWLELNWDEGPYYQTKRFDRYNEVVDQL------LAEDKAYKC---YCPKELLDEIREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++           R D +  + +  N A        I      + T   D   + 
Sbjct: 112 QMAAGVKP----------RYDANHPKVVAANAAATEDSPFCIRFRNPKEGTVVFDDKIRG 161

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  +    D  D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 162 RIEIANSELD--DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            +  A+     +        + L  DG   K+SKR G                +++    
Sbjct: 215 NIYEALGAPVPEFAHC---AMILGDDGA--KLSKRHG------------AVSVMQYRDEG 257

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAY--ARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                LL++   ++     +  +F +Q         S+ + A     D    L    +  
Sbjct: 258 YLPQALLNY-LVRLGWSHGDQEIFSLQEMIDLFSLESVSKSASAFNTDKLLWLNNHYIKT 316

Query: 487 QESE---------FDTSELQLIV--HLAEYPRVIENATIAQEPYKLAFYLYDLA------ 529
            E E          D  E+ L     +A    VI+              L +LA      
Sbjct: 317 AEPEYVAKYLQWHLDQKEISLENGPAIA---EVIKLVGER------CNTLIELAEQSRYF 367

Query: 530 -SVFHGHWSHGRENPRLRFVQANNRKLTMM 558
              F+     G     LR V     +L + 
Sbjct: 368 YQDFNEF-EAGAAKKHLRPVAKEALELALA 396


>gi|260432318|ref|ZP_05786289.1| leucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416146|gb|EEX09405.1| leucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 244

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +GI   +    K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQEAWDKAGIFTAKRTADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKLSTG 69

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           + V      +  G      A+++    +   Y N +D+
Sbjct: 70  HNVLHPMGWDAFGMPAENAAMAIGGHPKDWTYGNIADM 107


>gi|227548727|ref|ZP_03978776.1| valyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079194|gb|EEI17157.1| valyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 901

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 58/207 (28%), Gaps = 32/207 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + L    V    +  +        ++     N TG +H+GH     + D L       G
Sbjct: 20  EQALYEGWVDKGYFTADPASGKPAYSVVLPPPNVTGQLHMGHALDHTLMDALVRRKRMQG 79

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YEV            ++   ++   + +  L                         ++  
Sbjct: 80  YEVL-------WLPGMDHAGIATQTKVEAKLK------------------------EEEG 108

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
            +  +   ++++  V ++  +     I   ++A+    D          G    ++ I  
Sbjct: 109 RDRYSLGRDEFVDRVWEWK-ENYGGAIASQMRAIGDSVDWSRERFTLDEGLSRAVQTIFK 167

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMD 305
            L   G +Y        S   +    D
Sbjct: 168 QLFDAGLIYRDYRLVNWSPVLETAVSD 194


>gi|239626268|ref|ZP_04669299.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520498|gb|EEQ60364.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 485

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 121/334 (36%), Gaps = 54/334 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E Y+         + +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEGGDFLLRI-----EDTDQERYVE------GAVEI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                    L +++    +G   G Y++       +  +Y+ +L++  E  +        
Sbjct: 58  IYQTLKDTGLIHDEGPDKDGG-VGPYVQSERQASGIYLEYAKKLIDKGE-AYYCFCTPER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + ++ + +  +      +H + +S+++                   G  Y      P + 
Sbjct: 116 LASLKETVGGEEIMAYDKHCLGLSQEEIRAN------------LEAGLPYVIRQNNPTTG 163

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT   D     +   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G
Sbjct: 164 TTTFNDEIYGDITVDNSELD---DMVLIKSDGYPTY---NFANVVDDHLMGITHV--VRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416
           +++     +   +  A   +     V +     L  D    K+SKR+G   +   ++++ 
Sbjct: 216 NEYLSSSPKYNRLYQAFGWE-----VPVYVHCPLITDEQHHKLSKRSGHS-SFEDLLEQG 269

Query: 417 -VGSDSVRFMMLWRKNSELL--DFDFCKVKEQSK 447
            +    V ++ L   + E     F   ++ ++  
Sbjct: 270 FLSEAVVNYVALLGWSPEDNREIFSLEEMVKEFD 303


>gi|160878379|ref|YP_001557347.1| glutamyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|187470987|sp|A9KRX7|SYE_CLOPH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|160427045|gb|ABX40608.1| glutamyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 490

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 134/393 (34%), Gaps = 81/393 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWR-- 184
           + +PTG MHVG+ R A+    +A      G +      I D   Q   +  A  + +R  
Sbjct: 9   APSPTGRMHVGNLRTALYEYLIA---KHEGGDFILR--IEDT-DQERLVEGATEIIYRTI 62

Query: 185 -YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                +++   D  +G+ P V  +     +  KY+ EL+   E                 
Sbjct: 63  AKTGLIHDEGPDKDKGFGPYVQSERQATGIYLKYAKELVENGEA------------YYCF 110

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIR--------DIIDNLARQGYVYEGILPPPK 295
             ++ L+ L       + E+D    + +           + ++     G  Y      P 
Sbjct: 111 CTKERLETLKSA----VGEEDGESKEITKYDKHCLHLSKEEVEANLAAGMPYVIRQNMPT 166

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
             TT   D     +   ++ +    D  L+KSDG  TY  A++       +  F  + +V
Sbjct: 167 EGTTSFTDAIYGTITVENSELD---DMILIKSDGFPTYNFANV------IDDHFMEITHV 217

Query: 356 M-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           + G+++     +   +  A   ++      +     L  +    K+SKR+G   +   ++
Sbjct: 218 VRGNEYLSSTPKYTRLYKAFGWEEP-----VYIHCPLITNEEHQKLSKRSGHS-SFEDLI 271

Query: 415 DE-------------VG------------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE- 448
           ++             +G             + VR       N     FD  K++  + E 
Sbjct: 272 EQGFVTEAIVNFIALLGWSSTTNEEIFSLEELVREFDYTHINKSPSVFDMNKLRWMNGEY 331

Query: 449 ----NPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +   Y +YA  + + +  +  D+    D 
Sbjct: 332 IKRMDSEKYYEYALPQIKKVVTKDYDLKFIADL 364


>gi|227877331|ref|ZP_03995404.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256842893|ref|ZP_05548381.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381727|ref|ZP_06627708.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|312977589|ref|ZP_07789336.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227863187|gb|EEJ70633.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614313|gb|EEU19514.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290921774|gb|EFD98795.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|310895328|gb|EFQ44395.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 933

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 97/279 (34%), Gaps = 51/279 (18%)

Query: 216 KYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGD 269
           K+  ++L+  E+    P      +  M+K  R D      +A  +   IF +ED      
Sbjct: 423 KFRDQILDQIEQANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPIVT 481

Query: 270 PSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           P  I  I     ++G            + EG             + D   + F S   G 
Sbjct: 482 PETIDHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDS---GS 538

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEK 377
                + K DG   ++ ADL               Y+ GSD   G+       + AV+ K
Sbjct: 539 SWSGVMEKRDG--LHYPADL---------------YLEGSDQYRGWFNSSLITSVAVTGK 581

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +  
Sbjct: 582 APYKEVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQADTTSDVAV 638

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
               +++ ++         +Y + R+ FR       D D
Sbjct: 639 SMGILQQSAE---------SYRKIRNTFRYMLANTSDFD 668


>gi|206902005|ref|YP_002251003.1| glutamyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|238064688|sp|B5YEP5|SYE_DICT6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|206741108|gb|ACI20166.1| glutamyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 477

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 45/282 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG +HVG    A+     A      G  + R   I D       LA S    Y++
Sbjct: 8   IAPSPTGYLHVGTAHTALFNWLFAR--HNKGTFILR---IED-----TDLARSTKE-YEE 56

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +      L   +  G Y +    +L  KY+ ELL     K L      + + + +  ++
Sbjct: 57  NIIEGLKWLGLYWDEGPYYQTQRLDLYRKYADELLK----KGLAYYCYCTPEELEERRKE 112

Query: 248 DLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            L         +  +++S+++  R +    +  I  L  +G                  D
Sbjct: 113 ALAQKKPPRYDRKCLYLSDEERARYEREGRKPAIRLLVPEGKTVFN-------------D 159

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           + R ++ F +  +GD     ++KSDG  TY   + A     Y  G  ++I   G DH   
Sbjct: 160 IIRGEIEFNNEDIGDF---VIMKSDGIPTY---NFAVVIDDYTMGITHVIR--GEDHISN 211

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             +   +  A      +        + L       K+SKR G
Sbjct: 212 TPKQLFIYNAFGWTPPEFAH-----LPLLLGPDRSKLSKRHG 248


>gi|56697855|ref|YP_168226.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81819951|sp|Q5LP30|SYV_SILPO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56679592|gb|AAV96258.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 1020

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L +LV   RD    KMSK  G+ I    +VDE G+D++
Sbjct: 628 WVARMMMMQLAVVDQVPFHTVYLHQLV---RDEKGKKMSKTTGNVIDPLEIVDEFGADAL 684

Query: 423 RF 424
           RF
Sbjct: 685 RF 686



 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 4/118 (3%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +     +I  +   +G         +     I     N TG +HVGH     + D L 
Sbjct: 7   FDAAEAEARITKAWEEAGAFKAGANRSRDESFTIMIPPPNVTGALHVGHAFNNTLQDILT 66

Query: 152 SLMAFSGYEVTREYYINDAGA----QINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
                 G++   +   + AG     Q+  +  +     ++ L   +       + G Y
Sbjct: 67  RWHRMRGFDTLWQPGQDHAGIATQMQVEKMLAATQQPSRRELGREEFLKKVWEWKGQY 124


>gi|135184|sp|P28350|SYV_NEUCR RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
          Length = 1093

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 34/198 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +PS +             +      K    K  I     N TG +H GH     + DTL 
Sbjct: 141 NPSAVEAAWYQWWEKAGYFKPESCRKPSAGKFVIPLPPPNVTGALHCGHALANSLQDTLI 200

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE       + AG    ++   + W+ ++ +                      
Sbjct: 201 RWYRMKGYETLWVPGCDHAGISTQSVVEKMLWKKEKKIRQE------------------- 241

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          EK+  +V ++  +   +I     K +    D         +   +
Sbjct: 242 ------------LGREKFTDLVWEWKGEYHQRINNAQ-KLMGGSMDWSREAFTMDKNLTA 288

Query: 272 PIRDIIDNLARQGYVYEG 289
              +    L  +G +Y  
Sbjct: 289 ATMETFCRLHDEGLIYRS 306


>gi|315606543|ref|ZP_07881557.1| glutamate--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251767|gb|EFU31742.1| glutamate--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 505

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 102/294 (34%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFAR--QHGGEFVFR---IEDTDSHRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   +E+  +Y  +LL+          
Sbjct: 55  GAEEYIIESFRWLGIPFDEGVSF--GGDHGPYRQSERREIYKQYVRQLLDSG-----KAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +     ++  R++++    Q+D         R   +  ++ +D L   G  +      
Sbjct: 108 IAFDTPEELEAKRNEIENF--QYDARTRMQ--MRNSLTLPKEEVDRLMADGEQFTVRFKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     DM R  +  +S ++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPGQEVHVDDMIRGDVRVKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRAFGWEDTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|262045859|ref|ZP_06018823.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573818|gb|EEX30374.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 933

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 97/279 (34%), Gaps = 51/279 (18%)

Query: 216 KYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGD 269
           K+  ++L+  E+    P      +  M+K  R D      +A  +   IF +ED      
Sbjct: 423 KFRDQILDQIEQANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPIVT 481

Query: 270 PSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           P  I  I     ++G            + EG             + D   + F S   G 
Sbjct: 482 PETIDHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDS---GS 538

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEK 377
                + K DG   ++ ADL               Y+ GSD   G+       + AV+ K
Sbjct: 539 SWSGVMEKRDG--LHYPADL---------------YLEGSDQYRGWFNSSLITSVAVTGK 581

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +  
Sbjct: 582 APYKEVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQADTTSDVAV 638

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
               +++ ++         +Y + R+ FR       D D
Sbjct: 639 SMGILQQSAE---------SYRKIRNTFRYMLANTSDFD 668


>gi|256846981|ref|ZP_05552427.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715645|gb|EEU30620.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 931

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 100/304 (32%), Gaps = 54/304 (17%)

Query: 215 DKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   E+L    E K+ P      ++ M+K  R D      +   +   IF +ED     
Sbjct: 418 DKMRDEILKAVDEVKYFPEWGKVRLRNMLKD-RGDWVISRQRVWGVPLPIFYAEDGTPIM 476

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               I  + D L   G            + +G   P         + D   + F S    
Sbjct: 477 TEETINHVADLLREYGSNVWFEREAKDLLPDGFTSPHSPNGEFTKETDIMDVWFDSGS-- 534

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
               + +L      TY A                 +Y+ GSD   G+       +  VS 
Sbjct: 535 --SHQGVLNERSYLTYPAD----------------LYLEGSDQYRGWFNSSMITSVVVS- 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
             A    +L +   L  D    KMSK  G+ I    VV ++G++ +R  ++    S  + 
Sbjct: 576 GHAPYKSVLSQGFTL--DKKGKKMSKSLGNVIDPAKVVQQMGAEIIRLWVMSADTSADVR 633

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
                 ++ S+         AY + R+ FR       D D D    N +  E      + 
Sbjct: 634 VSMGTFQQISE---------AYRKLRNTFRFLLANTSDFDAD---ENTVSYEKLTSVDQY 681

Query: 497 QLIV 500
            L+ 
Sbjct: 682 MLVK 685


>gi|300771344|ref|ZP_07081220.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762014|gb|EFK58834.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 884

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 58/235 (24%), Gaps = 35/235 (14%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                K  S  + +G  + R+   +     I     N TG +H+GH     + D L    
Sbjct: 23  KEAEEKWYSYWMNNG--FFRSTPDEREPYTIVMPPPNVTGVLHMGHMLNNTIQDVLIRRA 80

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G            G    ++A              D    +             E  
Sbjct: 81  RMQGKNACWVP-----GTDHASIATEAKVVAMLKEQGID----KKSISREDFLKYAWEWK 131

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY                          II   L+ L    D   ++          + 
Sbjct: 132 EKYG------------------------GIILKQLEKLGASCDWERTKFTMDPDLSEAVL 167

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           D      ++GY+Y G+         +    D + +          +   +  SD 
Sbjct: 168 DTFIKFYKEGYIYRGVRMVNWDPQGKTALSDEEVIRKEVNQKLYYIRYQVKDSDQ 222


>gi|217967311|ref|YP_002352817.1| lysyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336410|gb|ACK42203.1| lysyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 524

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 110/330 (33%), Gaps = 41/330 (12%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG K  +      P+GP+H+G+ R  + GD L   +   G EV    YI D    +  + 
Sbjct: 20  KGKKNVVA-TGITPSGPIHLGNLREILTGDALYRALQDKGSEVEFI-YIADTFDPLRKVY 77

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYS 237
             +   Y + +    S++P+   P    ++  +   + +   +     E K +   + Y 
Sbjct: 78  PFLPDSYAEHVGKPISEIPD---PEGCHENYAEHFLEPFLEAIKILGIEPKVIKAHESYK 134

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                +II   L+                  +   I  I++ +A +    E    P   K
Sbjct: 135 NGLYTEIIDLTLQ------------------NNEKITQILNEIAGRNL--EKNFVPLLPK 174

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM- 356
             +   +    ++           +      G   Y   + A    + +      I+ + 
Sbjct: 175 CEKCGRLTTTSIVSFDVKKHQVEYQCKCGHTGIADYSKGE-AKLPWRLDWPGRWKIFGVT 233

Query: 357 ----GSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
               G DH+     Y             +       + E + L   G    MS   G  I
Sbjct: 234 VEPFGKDHATTGGSYDTGKVITKEIFGYEPPYP--FIYEWIYLKGKGA---MSSSKGIAI 288

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
            +  +++ +    VR+++L  K  + +DFD
Sbjct: 289 PINEILEILPPSWVRYLILRYKPDKHIDFD 318


>gi|159042613|ref|YP_001531407.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082998|sp|A8LJY0|SYL_DINSH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157910373|gb|ABV91806.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 869

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 92  YLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P+ +  K  ++  ++G         K     +E     P+G +H+GH R   +GD +
Sbjct: 13  RFDPAQIEPKWRAAWDLAGTFTATPDPAKQKYYVLEMF-PYPSGRIHMGHVRNYTMGDVI 71

Query: 151 ASLMAFSGYEV 161
           A   A  G+ V
Sbjct: 72  ARYKASCGFSV 82


>gi|49474717|ref|YP_032759.1| leucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|60390695|sp|Q6FYL6|SYL_BARQU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49240221|emb|CAF26690.1| Leucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 880

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    +   +I      +         K  +  +   P+G +H+GH R   +GD +A
Sbjct: 11  RYNPRAREQKWQAIWDEKKIFQITEENCREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 70

Query: 152 SLMAFSGYEV 161
                 G++V
Sbjct: 71  RYKRAKGFDV 80


>gi|15606455|ref|NP_213835.1| glutamyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226170|sp|O67271|SYE_AQUAE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|2983664|gb|AAC07230.1| glutamyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 473

 Score = 42.6 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 37/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A      G+ +  E                      + 
Sbjct: 9   APSPTGYLHLGNARTAIFSYLFAR-HNNGGFVLRIED------TDPERSKKEYEEMLIED 61

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  E Y           E  D Y   +    E         +     ++  R++
Sbjct: 62  LKWLGIDWDEFYRQ--------SERFDIYREYVNKLLESGHAYPC--FCTPEELEKEREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +   I +        +         + ++   ++G  +      P+++T    D+ +  
Sbjct: 112 ARKKGIPYR-------YSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDLIKGH 164

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +   GD     +++SDGS TY    +         G  ++I   G DH     +  
Sbjct: 165 IAINTDDFGDF---VIVRSDGSPTYNFVVV---VDDALMGITHVIR--GEDHIPNTPKQI 216

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +   L    V L  D    K+SKR G  
Sbjct: 217 LIYEALGFPVPKFAHL---PVILGED--RSKLSKRHGAV 250


>gi|327313151|ref|YP_004328588.1| glutamate--tRNA ligase [Prevotella denticola F0289]
 gi|326945606|gb|AEA21491.1| glutamate--tRNA ligase [Prevotella denticola F0289]
          Length = 505

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGKLIFRIEDTDSNRFVPGAEEYILDSFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  +Y  +LL+  +  ++       ++A  K I+  
Sbjct: 68  GIKFDEGVSFGGEYGPYRQSERREIYKEYVRQLLDAGK-AYIAFDTPEELEAKRKEIQ-- 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               N Q+D         R   +  ++ +D L   G  +         +     DM R  
Sbjct: 125 ----NFQYDAHTRMQ--MRNSLTMSKEEVDGLIDDGQQFVVRFKVEPGEEVHVNDMIRGD 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +  +S ++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VCIKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   + +        L+ L  +G   K+SKR GD
Sbjct: 231 VLLYRAFGWEDSMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|256848733|ref|ZP_05554167.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256714272|gb|EEU29259.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 933

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 97/279 (34%), Gaps = 51/279 (18%)

Query: 216 KYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGD 269
           K+  ++L+  E+    P      +  M+K  R D      +A  +   IF +ED      
Sbjct: 423 KFRDQILDQIEQANFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPIVT 481

Query: 270 PSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
           P  I  I     ++G            + EG             + D   + F S   G 
Sbjct: 482 PETIDHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDS---GS 538

Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEK 377
                + K DG   ++ ADL               Y+ GSD   G+       + AV+ K
Sbjct: 539 SWSGVMEKRDG--LHYPADL---------------YLEGSDQYRGWFNSSLITSVAVTGK 581

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
                VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  +  
Sbjct: 582 APYKEVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQADTTSDVAV 638

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
               +++ ++         +Y + R+ FR       D D
Sbjct: 639 SMGILQQSAE---------SYRKIRNTFRYMLANTSDFD 668


>gi|78188501|ref|YP_378839.1| isoleucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170700|gb|ABB27796.1| Isoleucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 1083

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +K A  N+++   +    D    KMSK  G+ +    +++
Sbjct: 586 GVDQTRGWFYTLHAIATLLFDKPAYKNLIVNAHI---LDKNGHKMSKSKGNVVDPFEMME 642

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSK-------ENPVFYVQYA 457
             G+D++R ++M+     +   F+  +++E+ +        +  F+V YA
Sbjct: 643 RYGADALRWYLMVSSAPWKPKSFNTDEIEEEQRRFFRALVNSYNFFVLYA 692


>gi|66816517|ref|XP_642268.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997204|sp|Q54YD4|SYIC_DICDI RecName: Full=Probable isoleucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Isoleucine--tRNA ligase; Short=IRS;
           Short=IleRS
 gi|60470339|gb|EAL68319.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1067

 Score = 42.2 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 112/334 (33%), Gaps = 55/334 (16%)

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
            + +F +EK        +      + R+          ++ISED    G+   +   ID 
Sbjct: 439 WVPDFVKEKRFANWLKNATD--WAVSRNRY--WGTPIPLWISED----GEEVVVIGSIDE 490

Query: 280 LAR----------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
           L R          +  +    +P  K K T +   D     F S  +             
Sbjct: 491 LERLSGVRVTDLHRESIDHITIPSQKGKGTLRRIEDVFDCWFESGSMPY----------A 540

Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLL 385
              Y   +    K K+E+ F  + I    ++     +        +S     K     L+
Sbjct: 541 QQHYPFEN----KDKFEKIFPAHFI----AEGLDQTRGWFYTLLVLSTALFDKPPFQNLI 592

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSELLDFDFCKVK 443
              + L  DG   KMSKR  ++     VV +VG+DS+R  ++      +E L F    V+
Sbjct: 593 VNGLVLAADGK--KMSKRLKNYPDPMEVVSKVGADSLRLYLINSPVVRAETLKFQEKGVQ 650

Query: 444 EQSKENPVFYVQYAY---ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
           +  K+  +     AY    +    F +A +     D  +   +    +     S   LI 
Sbjct: 651 DMIKDVFLP-WFNAYRFFVQNCLRFEKATNTTFQPDIKVALASENVMDKWILASCQSLIA 709

Query: 501 HLAEYPRVIENATIAQE--PYKLAFYLYDLASVF 532
               + R    A       P KL  ++ DL + F
Sbjct: 710 ----FVRAEMAAYRLYTVVP-KLVRFIEDLTNWF 738


>gi|325853535|ref|ZP_08171367.1| glutamate--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484339|gb|EGC87267.1| glutamate--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 505

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGKLIFRIEDTDSNRFVPGAEEYILDSFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  +Y  +LL+  +  ++       ++A  K I+  
Sbjct: 68  GIKFDEGVSFGGEYGPYRQSERREIYKEYVRQLLDAGK-AYIAFDTPEELEAKRKEIQ-- 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               N Q+D         R   +  ++ +D L   G  +         +     DM R  
Sbjct: 125 ----NFQYDAHTRMQ--MRNSLTMSKEEVDGLIDDGQQFVVRFKVEPGEEVHVNDMIRGD 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +  +S ++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VCIKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   + +        L+ L  +G   K+SKR GD
Sbjct: 231 VLLYRAFGWEDSMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|311105355|ref|YP_003978208.1| valyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760044|gb|ADP15493.1| valyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 964

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 73/258 (28%), Gaps = 42/258 (16%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +  +          ++ +    +     I+F   N TG +H+GH     + D L  
Sbjct: 28  LESRWYAEWDKRGYFQAGQHVKTGT-ESHPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVR 86

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                                           Y++ L ++   +P   + G+  + V + 
Sbjct: 87  --------------------------------YRRMLGDDTVFIPGTDHAGIATQIVVER 114

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             D       +   EK++  V ++  ++    I + ++ L    D               
Sbjct: 115 QLDAQKVSRHDLGREKFVEKVWEWKEKSG-NAITEQVRRLGASADWPREYFTMDERMSRG 173

Query: 273 IRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           + +    L +QG +Y G         L    S      +     +        D     +
Sbjct: 174 VVETFVRLHKQGLIYRGKRLVNWDPKLLTAVSDLEVVSEETDGHMWHILYPFVDGPQTIV 233

Query: 325 LKSDGSYTYFAADLAYFK 342
            K   + T     +A  +
Sbjct: 234 DKDGQTVTLRGLTIATTR 251


>gi|293610316|ref|ZP_06692617.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827548|gb|EFF85912.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|218510283|ref|ZP_03508161.1| leucyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 137

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFETDNADPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|194337305|ref|YP_002019099.1| isoleucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309782|gb|ACF44482.1| isoleucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 1085

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +K A  N+++   +    D    KMSK  G+ +     ++
Sbjct: 585 GVDQTRGWFYTLHAIATLIFDKPAYKNLIVNGHI---LDKSGQKMSKSKGNVVDPFETME 641

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             G+D++R+ +L          F+  +++E+ ++       +  F+V YA
Sbjct: 642 RYGADALRWYLLVASPPWRPKSFNSDEIEEEQRKFFRAFINSYNFFVLYA 691


>gi|118589995|ref|ZP_01547399.1| glutamyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437492|gb|EAV44129.1| glutamyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 63/408 (15%), Positives = 131/408 (32%), Gaps = 88/408 (21%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTREYYINDAGAQIN 175
           +  +   + +PTG +H+G  R A+     A       L+     +  R          ++
Sbjct: 3   QNIVTRFAPSPTGFLHIGGARTALFNWLFAHHHGGKMLLRIEDTDRARS-----TQEAVD 57

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            L   + W     L  +   + +      + + V + LA+  +      PEE        
Sbjct: 58  ALIDGLSWL---GLDWDGEPISQFSRVERHKEVVEQMLANGTAYRCYCTPEE-------- 106

Query: 236 YSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                 +  +R+  +A     ++D    E D     P+ +  +I             +  
Sbjct: 107 ------LDTMREKARAEGKPPRYDGTWRERDASEA-PAGVDPVI------------RIKA 147

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+   T   D+ + +++  +  + D     L++SDG+ TY     A     ++ G  ++I
Sbjct: 148 PQDGETVVDDLVQGRVVIPNKDLDDF---VLMRSDGTPTYMH---AVVVDDHDMGITHII 201

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------ 407
              G DH     R   +  A+      +       + L       K+SKR G        
Sbjct: 202 R--GVDHLTNAARQTLIFQALGWDVPAMAH-----IPLIHGPDGAKLSKRHGATGAEAYR 254

Query: 408 ------ITLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
                   +R+ +  +G            D +++            FDF K++  +    
Sbjct: 255 EMGYLPQAMRNYLARLGWSHGDEEIISLEDMIKWFDFDAVGQSAARFDFKKLENLNGH-- 312

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             Y++        + R  K      +       V+   ++ D   + L
Sbjct: 313 --YMR--ATEDAELLRHWKVYLAHAEGG---DKVLSWLADSDNEAIAL 353


>gi|121606059|ref|YP_983388.1| valyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595028|gb|ABM38467.1| valyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 979

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 68/228 (29%), Gaps = 38/228 (16%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             P+ + +    +     +Y   L        I+    N TG +H+GH     + D+L  
Sbjct: 40  FEPADIERHWGPLWEQSGQYEPTLDESKPSFAIQLPPPNVTGTLHMGHAFNQTIMDSLTR 99

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G         + AG   QI           ++ L   +         G     +G
Sbjct: 100 YHRMKGDNTLWVPGTDHAGIATQIVV---------ERKLQGEE---------GKTRHDMG 141

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
              A+   + +    E       K+ S   + + +R    +++ +H+ F           
Sbjct: 142 ATPAEARKNFVAKVWE------WKEESGSTITRQMRRMGDSVSWKHEYF----TMDPKMS 191

Query: 271 SPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
             +      L  QG +Y G        IL    S    + + +   + 
Sbjct: 192 KVVTSTFVQLYEQGLIYRGKRLVNWDPILKSAVSDLEVESEEEDGFMW 239


>gi|318607300|emb|CBY28798.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 965

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 63/219 (28%), Gaps = 36/219 (16%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L  +Y    + + L         +  N         I     N TG +H+GH     + D
Sbjct: 15  LDKTYSPPEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMD 74

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G     +   + AG     +                               
Sbjct: 75  TLIRYQRMQGKNTLWQAGTDHAGIATQMV------------------------------- 103

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V +++A +      ++  + ++  +  +  ++   I R  ++ L    D          G
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDG 162

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + ++++   L ++  +Y G          +    D +
Sbjct: 163 LSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|317403334|gb|EFV83847.1| ValS protein [Achromobacter xylosoxidans C54]
          Length = 964

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 76/260 (29%), Gaps = 46/260 (17%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +  +       +   + +    +G    I+F   N TG +H+GH     + D L  
Sbjct: 28  LESRWYAEWEKRGYFAAGSHVKTGT-EGQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLIR 86

Query: 153 LMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                G +       + AG   QI                             V  + + 
Sbjct: 87  YHRMLGDDTVFIPGTDHAGIATQI-----------------------------VVERQLD 117

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +   ++      F E+ W    K+ S  A+   +R    + +   + F  +D   RG  
Sbjct: 118 AQKVSRHDLGREKFVEKVWE--WKEKSGNAITGQVRRLGASADWPREYFTMDDRMSRG-- 173

Query: 271 SPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
             + +    L +QG +Y G         L    S    + +     +        D    
Sbjct: 174 --VVETFVRLHKQGLIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYPFVDGPQT 231

Query: 323 PLLKSDGSYTYFAADLAYFK 342
            + K   + T     +A  +
Sbjct: 232 IVDKDGQTVTLRGMTIATTR 251


>gi|299771580|ref|YP_003733606.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701668|gb|ADI92233.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|262280963|ref|ZP_06058746.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257863|gb|EEY76598.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|238755183|ref|ZP_04616529.1| Valyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706630|gb|EEP99001.1| Valyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 958

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 63/219 (28%), Gaps = 36/219 (16%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L  +Y    + + L         +  N         I     N TG +H+GH     + D
Sbjct: 8   LDKTYSPLEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMD 67

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G     +   + AG     +                               
Sbjct: 68  TLIRYQRMQGKNTLWQAGTDHAGIATQMV------------------------------- 96

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V +++A +      ++  + ++  +  +  ++   I R  ++ L    D          G
Sbjct: 97  VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDG 155

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + ++++   L ++  +Y G          +    D +
Sbjct: 156 LSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 194


>gi|156058674|ref|XP_001595260.1| hypothetical protein SS1G_03349 [Sclerotinia sclerotiorum 1980]
 gi|154701136|gb|EDO00875.1| hypothetical protein SS1G_03349 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 472

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 71/228 (31%), Gaps = 44/228 (19%)

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKRLEAVAAAVSE 376
           +  D  ++KSDG  TY  A++       +  F  + +V+ GS+         A+  A   
Sbjct: 96  EFQDPIMVKSDGFPTYHLANV------VDDHFMKITHVVRGSEWIPSTHMHVAMYQAFGW 149

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHVVDEVGSDSVRF-MMLWRKNSE 433
           K           V L  D    K+SKR G  D  T R            F  +L   +  
Sbjct: 150 KPPTFAH-----VGLLLDKDRKKLSKRDGAIDIATYRD-AGYFPETVTNFVALLGWSHER 203

Query: 434 LLDF-------DFCKVKEQSKENPVF-----YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
             D        D   +K    ++ V      ++Q  +A      R++ +  P    DL  
Sbjct: 204 SYDIMSMQELVDNASMKYTRGDSVVTMAKLNFMQRKHAARYKELRRSNEPIP-PSQDLLE 262

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVI-------ENATIAQEPYKLA 522
               P            +  L EY  +I       + A        + 
Sbjct: 263 LAAKPVLQR--------MKSLPEYEELIFYNCENTDAAKENYILSIIC 302


>gi|325124515|gb|ADY84038.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|227879317|ref|ZP_03997183.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|262047597|ref|ZP_06020552.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|227861086|gb|EEJ68739.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|260572173|gb|EEX28738.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 477

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 122/402 (30%), Gaps = 53/402 (13%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   + + +    E  + L+     + +          +H+G+ R A+  DT+     + 
Sbjct: 2   LAVRVYNTLTRKKEEFKPLVPGHISMYV--CGPTVYNYIHIGNARSAIAFDTIRRYFEYK 59

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+V       D   ++   A +      +      +              +  E A  +
Sbjct: 60  GYDVKYVSNFTDVDDKMINEARAEKTTVPKLAEKFINAFLADT------TALNIEPATLH 113

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                   +           +   +K + D+  A  +  D++     F           I
Sbjct: 114 PRATHEIND-----------IITFVKSLIDNGYAYEVDGDVYYRAKKFKHYG-QLSDQNI 161

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFA 335
           + L       E I    +S+     D     L  ++    D++  D P  K    +    
Sbjct: 162 EQLEEG--ASEHINDTEQSRKEDPIDF---ALW-KAQKEPDEIGWDSPWGKGRPGWH--- 212

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV---LLCELVRLY 392
             +       +   D  I + G          E   A    K  +  V   L    V + 
Sbjct: 213 --IECSVMSTKYLGDT-IDIHGGGQDLEFPHHENEIAQSEAKTGKKFVNYWLHNGFVTVG 269

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK----- 447
           +D    KMSK   +F+T+  ++ EV    +RF M   +    +++    + + +      
Sbjct: 270 KD--QEKMSKSLHNFVTVHDILREVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRF 327

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           +N V  + Y         R A D   +   +L    +   E 
Sbjct: 328 KNTVTNINY---------RLADDTASEESAELAQAIMATNEK 360


>gi|187251862|ref|YP_001876344.1| methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186972022|gb|ACC99007.1| Methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 500

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 108/325 (33%), Gaps = 35/325 (10%)

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
             D+  G+Y G+Y       + +  + E +    +K L  VK+ +    +   +D L   
Sbjct: 114 KGDIYLGHYSGMYCNSCEAYMDETEAPEGICPIHKKPLTEVKEETYFFKLSKYQDALLKF 173

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
              +  F++         + ++  + +L+  +  V  GI      K T     D      
Sbjct: 174 YESNPSFLNPKFRSAEITNFVKSGLKDLSVTRTKVAWGIPVKSNPKHTIYVWFDALINYA 233

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG-------- 362
            +  +G                   D  +FK + ++ G ++   V  +D           
Sbjct: 234 SAAGLG--------------LNICEDKEFFKEELKKVGLNSFEDVWPADVHLIGKEIARF 279

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           ++    A+  A+     +                  KMSK  G+ +  + V DE G D +
Sbjct: 280 HMVIWPAMLMALGIPTPKKVFAHGWWTV-----EGEKMSKTLGNIVDPKKVADEYGLDPL 334

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI--FRQAKDIFPDLDFD-- 478
           RF  L+R+     D DF       + N            R++    +  D+  + ++   
Sbjct: 335 RFF-LFREVPFGADGDFSMDSFIKRYNADLANDLGNLLSRTLNMAVKYGDLPAEGEYKSP 393

Query: 479 -LFPRNVIPQESEFDTSELQLIVHL 502
            L     + +  E   SEL L   L
Sbjct: 394 LLVKAANVDKAVEEHMSELALDKTL 418


>gi|116070546|ref|ZP_01467815.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
 gi|116065951|gb|EAU71708.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
          Length = 884

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 70/210 (33%), Gaps = 41/210 (19%)

Query: 92  YLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              PS L +   +     G++       K     +      P+G +H+GH R  V+ D +
Sbjct: 31  RYDPSALEQRWRARWKDQGLDTTEAESNKPGFFALSMF-PYPSGSLHMGHVRNYVITDVI 89

Query: 151 AS--------LMAFSGYEVTREYYIN-------DAG-----------AQINTLALSVFWR 184
           A         ++   G++       N       D G            Q++ L LS+ W 
Sbjct: 90  ARVQRMRGDSVLHPMGWDAFGLPAENAAIERNIDPGEWTDRNIDQMRDQLDRLGLSIDWD 149

Query: 185 YQQALYNNDS---------DLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWL--P 231
            +QA  ++D          +L +G         V  +  D+   ++E ++     W    
Sbjct: 150 REQATCHSDYYRWTQWLFLELFDGGLAYRKNATVNWDPVDQTVLANEQVDADGRSWRSGA 209

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261
           +V+   +      I D  +AL    D    
Sbjct: 210 LVEQRQLNQWFLRITDYAEALLNDLDKLKG 239


>gi|283769365|ref|ZP_06342264.1| glutamate--tRNA ligase [Bulleidia extructa W1219]
 gi|283104022|gb|EFC05406.1| glutamate--tRNA ligase [Bulleidia extructa W1219]
          Length = 483

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 98/303 (32%), Gaps = 65/303 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI----NDAGAQINTLALSVFWR 184
           + +PTG MH+G+ R A+    +A        +    + +     D G  +      ++  
Sbjct: 7   APSPTGYMHIGNLRTALYTYLIAK------KDPEGVFILRIEDTDQGRFVEGATDIIYQT 60

Query: 185 YQQ-ALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            +Q  L  ++    EG Y G Y++       +  KY+ EL+      +      +  + M
Sbjct: 61  LKQCHLTYDEGPDKEGNY-GPYVQSERMRSGIYQKYAKELIQRGGAHYC-----FCDEEM 114

Query: 242 MKIIRD--DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           + + R+    +  N ++D                    +     G  Y      P S TT
Sbjct: 115 IHVQRELQTARKENFKYDDPCKLLSIEE---------CEKRIENGESYVIRQTVPTSGTT 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   +  + + +   LLKSDG  TY               F N+I     D
Sbjct: 166 SFDDEVFGHITVDNDTLDESI---LLKSDGFPTY--------------NFANIID----D 204

Query: 360 HSGYVKRLEAVAAAVS-----------EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           H+  +  +      +S              A    + C  V         K+SKR GD  
Sbjct: 205 HTMNITHVVRGMEYLSSTPKYNLIYQAFDWAIPTYVHCPPVM---KDEKTKLSKRNGDAS 261

Query: 409 TLR 411
              
Sbjct: 262 FQD 264


>gi|257871414|ref|ZP_05651067.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805578|gb|EEV34400.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 469

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 97/320 (30%), Gaps = 33/320 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +HVG+ R  V  DT+   + + GYEV       D   +I         R  +
Sbjct: 28  CGPTVYNYIHVGNGRSVVSFDTIRRYLEYRGYEVDYVMNFTDVDDKI--------IRTAK 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-VQAMMKIIR 246
            L  +  ++ + +           E  +K ++ L   P      ++     + A ++++ 
Sbjct: 80  ELKTSAPEIADRFI----------EAFNKDTAALNVQPATLNPRVMDHIEDIIAFIQVLV 129

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D   A    +D++     F           ID L        G       +   K D   
Sbjct: 130 DKGYAYMANNDVYYRTRKFKHYG-QLSDQSIDELE------VGASQRTGEEQKIKEDPLD 182

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L   +       D P       +    + +A       +     I + G         
Sbjct: 183 FALWKAAKENEIAWDSPWGLGRPGWHIECSVMAT------KHLGETIDIHGGGQDLTFPH 236

Query: 367 LEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
            E   A    K  +           +       KMSK  G+F+T+  +V ++    +RF 
Sbjct: 237 HENEIAQSEAKTGKTFANYWMHNGYVTIGEEEEKMSKSLGNFVTVHEMVQKIDPQVLRFF 296

Query: 426 MLWRKNSELLDFDFCKVKEQ 445
           +   +    + +    +KE 
Sbjct: 297 LATTQYRRPIKYSETTLKEA 316


>gi|281420248|ref|ZP_06251247.1| isoleucine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405743|gb|EFB36423.1| isoleucine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 1203

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSK  G+      ++D
Sbjct: 719 GVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLV---LDAKGNKMSKHVGNVTNPFEMID 775

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + G+D VRF M+      + L FD   V E  ++          F+  YA
Sbjct: 776 KYGADPVRFYMMTNSEPWDNLKFDPNGVDETRRKFFGTLYNTYSFFALYA 825


>gi|254460898|ref|ZP_05074314.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677487|gb|EDZ41974.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 1021

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L  LV   RD    KMSK  G+ +    ++DE G+D++
Sbjct: 633 WVARMMMMQLAVVDEVPFDTVYLHGLV---RDAKGKKMSKSTGNVVDPLEIIDEFGADAL 689

Query: 423 RF 424
           RF
Sbjct: 690 RF 691


>gi|218249402|ref|YP_002375106.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223888983|ref|ZP_03623574.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224533521|ref|ZP_03674110.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226321905|ref|ZP_03797431.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226735049|sp|B7J2G1|SYC_BORBZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218164590|gb|ACK74651.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885799|gb|EEF56898.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224513194|gb|EEF83556.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226233094|gb|EEH31847.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|312148140|gb|ADQ30799.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 480

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 113/338 (33%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYVFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +  K   + V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLDNKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++EN +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|149184611|ref|ZP_01862929.1| glutamyl- and glutaminyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831931|gb|EDL50364.1| glutamyl- and glutaminyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 476

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 107/308 (34%), Gaps = 50/308 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  K  +   + +PTG +H+G  R A+     A       L+     +  R         
Sbjct: 4   ETGKQVVTRFAPSPTGFLHIGGARTALFNWLYARHHRGRALLRIEDTDRKRS-----TQD 58

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
            I+ +   + W     L  ++  L +      + +   + L   ++ +    PE+     
Sbjct: 59  AIDKIIEGLDWL---GLDYDEPPLFQSDRAARHAEVANQLLEAGHAYKCYATPED----- 110

Query: 233 VKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
                ++AM    R + +     +      E +  +G P  IR  +              
Sbjct: 111 -----LEAMRAEQRANKQPMRYDRRWRDRDESEAPKGAPYVIRLKV-------------- 151

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
            P + +T  + ++  K  +  + +     D  LL++DG+ TY    LA     ++ G  +
Sbjct: 152 -PTEGETVIEDEVQGKVTVQNAEID----DYVLLRADGTPTYM---LAVVVDDHDMGVTH 203

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I   G DH     R   V  A+   +      +   V L       K+SKR G  + + 
Sbjct: 204 IIR--GDDHLNNAFRQLPVIRAMDAIEGGWPDPVYAHVPLIHGADGAKLSKRHG-AVGVE 260

Query: 412 HVVDEVGS 419
              DE G 
Sbjct: 261 AYRDEEGV 268


>gi|150401798|ref|YP_001325564.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187631641|sp|A6UWT0|SYC_META3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150014501|gb|ABR56952.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 479

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 66/176 (37%), Gaps = 24/176 (13%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
            K  +N  +     +  +    KMSK  G+F TL+ + ++  ++ +RF +L R  S  LD
Sbjct: 245 DKKWVNYWIHTGFVMVNN---EKMSKSLGNFSTLKDLFEKYSAELIRFFLLERHYSSPLD 301

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
           +    +     +N +  +          FR ++  +   + D      I   +E   + +
Sbjct: 302 YTEDAI--NHSKNNLDKLYNTIQNITVAFRNSEIKYKLNEIDKNTIETIHNCTEKFYTAM 359

Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH---WSHGRENPRLRFVQ 549
                   +     N   A        Y++++++  + +   +++  E P    + 
Sbjct: 360 D-----DNF-----NTAQAL------KYVFEVSTAINKYINNYANSDELPNYSIIL 399


>gi|124023208|ref|YP_001017515.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166231629|sp|A2C9U0|SYL_PROM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123963494|gb|ABM78250.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 878

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 39/201 (19%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------- 152
           +     +  G++          +     +   P+G +H+GH R  V+ D +A        
Sbjct: 26  RWQKEWLRQGLDRTPVAETNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQRMRGD 85

Query: 153 -LMAFSGYEVT----------REYYINDAGA--------QINTLALSVFWRYQQALYNND 193
            ++   G++            R     D           Q++ L LS+ W  QQA  + D
Sbjct: 86  AVLHPMGWDAFGLPAENAAIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQD 145

Query: 194 S---------DLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWL--PIVKDYSVQA 240
                     +L  G         V  +  DK   ++E ++     W    +V+   ++ 
Sbjct: 146 YYRWTQWLFLELFAGGLAYQKEATVNWDPIDKTVLANEQVDGEGRSWRSGALVEQRQLKQ 205

Query: 241 MMKIIRDDLKALNIQHDIFIS 261
               I D   AL    D    
Sbjct: 206 WFLRITDYADALIDDLDELTG 226


>gi|91225562|ref|ZP_01260636.1| valyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91189682|gb|EAS75956.1| valyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 952

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L         +  +        +I     N TG +H+GH     + DTL 
Sbjct: 4   TYNPTSIEQALYQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                       +   + AG     +                               V +
Sbjct: 64  RCERMKDKNTLWQVGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  E ++  + ++  ++   I +  L+ L    D          G  +
Sbjct: 93  KIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQ-LRRLGASVDWDRERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L     +Y G               D +
Sbjct: 152 AVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLE 187


>gi|92117538|ref|YP_577267.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800432|gb|ABE62807.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 659

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 104/334 (31%), Gaps = 54/334 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-------NTLALSVFWR 184
           P G  H+GH   A+  D LA      G +V      ++ G ++       N  AL +  R
Sbjct: 159 PNGAPHIGHAYEAIATDVLARFQRLDGKDVFFLTGTDEHGQKMVQTAQKENISALELATR 218

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             + L   D  L   +    +++                      + +    S  A    
Sbjct: 219 NAELLRKLDETLNISFNR--FIRTSEPAHHHSVQEIWKRMAANGDIYL----SSYAGWYS 272

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKC 302
           +RD  +A   + +  + ED+  RG      + ++  +   +   Y+  L           
Sbjct: 273 VRD--EAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLALYESQPDFI 330

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM------ 356
             D ++    S + G   D  + ++   +     D            ++++YV       
Sbjct: 331 GPDSRRNEVISFVKGGLKDLSISRTTFDWGVKVPD----------DPEHVMYVWVDALTN 380

Query: 357 -----------GSDHSGYVKRLEAVAA------AVSEKKAQINVLLCELVRLYRDG---- 395
                        D   +   L  +        AV      ++  +    R+Y  G    
Sbjct: 381 YITGVGFPDENDKDWRYWPADLHIIGKDIIRFHAVYWPAFLMSAGIPLQKRVYAHGFLFN 440

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              KMSK  G+ +   ++  + G D VR+  L  
Sbjct: 441 RGEKMSKSVGNVVDPFNLAAQYGVDQVRYFFLRE 474


>gi|90423951|ref|YP_532321.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|123275221|sp|Q215D4|SYE_RHOPB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|90105965|gb|ABD88002.1| glutamyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 92/304 (30%), Gaps = 52/304 (17%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+     A      G              +I        
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYA---KKRG---------GKMLLRIEDTDRERS 51

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            +       +     E  + G  +       A ++   +              Y+    +
Sbjct: 52  TQAAIDAILDGLKWLELGWDGDVVYQYAN--AARHREVVDEMLAAGTAYRC--YASAEEL 107

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
             +R+  KA            D    D P+ ++  +  L            P   +T  +
Sbjct: 108 AQMRESAKAEGRTRFYNGLWRDRDPSDAPAGVKPTV-RLKA----------PLTGETVIE 156

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +  + +     +     D  LL+ DGS TY    LA     ++ G  ++I   G DH 
Sbjct: 157 DQVQGRVVWQNDNLD----DLVLLRGDGSPTYM---LAVVVDDHDMGVTHVIR--GDDHL 207

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
               R + +  A+  +     +     + L       K+SKR G           +G D+
Sbjct: 208 INAARQKQIYDALGWE-----IPSMSHIPLIHGPDGSKLSKRHG----------ALGVDA 252

Query: 422 VRFM 425
            R M
Sbjct: 253 YRAM 256


>gi|34763278|ref|ZP_00144237.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887049|gb|EAA24161.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 862

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 15  KWQERWSKDNIFKTENKVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 74

Query: 160 EV 161
            V
Sbjct: 75  NV 76


>gi|307129160|ref|YP_003881176.1| valyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306526689|gb|ADM96619.1| valyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 952

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 63/216 (29%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + + L         +  +        +I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPHDIEQPLYEHWEKQGYFKPHGDTSQESFSIMIPPPNVTGSLHMGHAFQQTIMDTMI 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 152 AVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLE 187


>gi|294784860|ref|ZP_06750148.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486574|gb|EFG33936.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 859

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWSKDNIFKTENKVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|294010028|ref|YP_003543488.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292673358|dbj|BAI94876.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 838

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 2/131 (1%)

Query: 92  YLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P     +  ++          +   K     +E     P+G +H+GH R   +GD L
Sbjct: 4   RFNPLEADARWQAAWDAKQTFKASDSSEKPRSYVLEMF-PYPSGRIHIGHVRNYSMGDVL 62

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A     +G+EV      +  G      A+       +  Y N +++        +     
Sbjct: 63  ARFRRMTGHEVLHPMGWDAFGMPAENAAMEKNVHPGKWTYENIANMKAQLKKLGFALDWS 122

Query: 211 KELADKYSSEL 221
           +ELA  +    
Sbjct: 123 RELATCHPDYY 133



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           G   KMSK   + +    ++ + G+D+VR+ ML     E
Sbjct: 610 GRVEKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPE 648


>gi|291543564|emb|CBL16673.1| glutamyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 481

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 103/286 (36%), Gaps = 32/286 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+    +A     +G +        D    +      ++   + A
Sbjct: 10  APSPTGYMHIGNLRTALYTYFIAR---KNGGDFILRIEDTDQERYVEGAVDVIYRTLRMA 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y++     +   Y+ +L+   +  +        + ++ +   D 
Sbjct: 67  GITWDEGPDIGGPVGPYVQSERMGMFKDYALKLVEQGD-AYYCFCDKERLASLHEA--DG 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           + A+   H   +S        P  ++  +D     G  Y      PK  TT   D     
Sbjct: 124 VGAMYDGHCRNLS--------PEEVQQKLDA----GVPYVIRQKMPKEGTTTFHDEIYGD 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +  +    D+ L+K+DG  TY   + A     +  G  ++  V G+++     +  
Sbjct: 172 ITVENASLD---DQILIKTDGMPTY---NFANVVDDHTMGITHV--VRGNEYLSSTPKYN 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
            +  A   +    + + C  V         K+SKR GD  +   ++
Sbjct: 224 LLYQAFGWEVP--HYIHCAPVM---KDAHNKLSKRNGDA-SFEDLI 263


>gi|225849332|ref|YP_002729496.1| isoleucine-tRNA ligase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643461|gb|ACN98511.1| isoleucine#tRNA ligase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 938

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 33/247 (13%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D+      +  + EG           K + D   + F S +                   
Sbjct: 499 DVWFEKDVKELLPEGYRCKKCGSQNFKKEEDILDVWFDSGVS-----------------H 541

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
           AA L Y + +  R   +M Y+ GSD      +   + +  S  +A  + +L     L   
Sbjct: 542 AAVLKYGEWEELRWPADM-YLEGSDQHRGWFQSSLLESVASYNRAPYDSVLTHGFTLDEK 600

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK AG+ +    V++E G+D +R  ++    +E +   F  +K  +++      
Sbjct: 601 GR--KMSKSAGNVVAPEKVINEYGADILRLWVVTEDYTEDIKIGFNLIKRIAED------ 652

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              Y + R+ FR     F    +D  P     +  +    +  ++  L    ++ + A  
Sbjct: 653 ---YRKIRNTFR----FFLGNLYDFNPSQDKVEYKDMLELDRWILSKLQGLIQLSDKAYE 705

Query: 515 AQEPYKL 521
             + +K+
Sbjct: 706 EGKFHKI 712


>gi|254459132|ref|ZP_05072554.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084025|gb|EDZ61315.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 466

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 126/396 (31%), Gaps = 64/396 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSD 195
           H+GH + A+V D L+ ++  +GY+VT                      Y + + + +D  
Sbjct: 36  HLGHAKSALVFDLLSRVLKANGYDVT----------------------YARNITDIDDKI 73

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFP------EEKWLPIVKDYSVQAMMKIIRDDL 249
           + +    G  +K +     D +  E+          E K    + D   + + K+I    
Sbjct: 74  IKKAAESGKDIKEITDFYTDAFHKEMDAIGVSRPDIEPKATESL-DAMYELIQKLIDSGH 132

Query: 250 KALNIQHDIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                + DI+        +    S ++D  D L R     E  L              + 
Sbjct: 133 AYKTSEGDIYFDTSSDGEYLSLSSRVQDEDDKLQR----VENSLQKRNPADFALWKSVKD 188

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKR 366
             +  ++  G+          G   +     A   K     G +  + + G         
Sbjct: 189 NTITFNSPFGE----------GRPGWHLECSAMIEKHLAHEGAEFAVDIHGGGADLLFPH 238

Query: 367 LE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
            E   A         +         +  DG   KMSK  G+   L+  + E   + +RF 
Sbjct: 239 HENEAAQTRCATNHALANYWMHNGFVNIDGE--KMSKSLGNSFFLKDALKEYDGEVLRFY 296

Query: 426 MLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
           +L        +F+       + + +          +   + ++   +    D   F  ++
Sbjct: 297 LLSTHYRSNFNFNTQDLATSKKRLD----------KIYRLKKRLFGLADCTDATPFKESL 346

Query: 485 IPQESE--FDTSELQLI-VHLAEYPRVIENATIAQE 517
           +   S+    +S L LI   ++    V++ A   +E
Sbjct: 347 LKALSDDMNVSSALALIEAFISSTNEVLDTAGKHKE 382


>gi|332968905|gb|EGK07952.1| valine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 942

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 76/270 (28%), Gaps = 46/270 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +             Y      K    +I+    N TG +H+GH     + D LA  
Sbjct: 6   NPSEIETKHYQNWEQN-GYFAADFAKKDSFSIQLPPPNVTGTLHMGHAFNQTIMDGLARY 64

Query: 154 MAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
               G+        + AG   QI                             V  + + +
Sbjct: 65  YRMKGFNTCWIPGTDHAGIATQI-----------------------------VVERQLAE 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +   ++     +   E +L  V  +  ++    I   ++ +    D              
Sbjct: 96  QNISRH-----DLGREAFLEKVWQWKEKSG-GTITQQMRRVGCSADWSREYFTMDDTRAE 149

Query: 272 PIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
            +  +   L  QG +Y G        +L    S    +       +      + D+ +  
Sbjct: 150 IVTQVFVKLYNQGLIYRGKRLVNWDPVLGTAVSDLEVENVETDGSMWHIRYPLADNPNEA 209

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           ++ +         D+A      +  + ++I
Sbjct: 210 VIVATTRPETLLGDVAVAVHPKDERYTHLI 239


>gi|315635829|ref|ZP_07891091.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479808|gb|EFU70479.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 821

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+S    +K  +    +      +   K  K  +      P+G +H+GH R   +GD  A
Sbjct: 3   YISKDIEKKWQNFWSENQSFEPSSSKTKEKKYILSMF-PYPSGRIHMGHVRNYCIGDAFA 61

Query: 152 SLMAFSGYEV 161
                S + V
Sbjct: 62  RHFRKSDFNV 71


>gi|301165609|emb|CBW25180.1| valyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 888

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 62/220 (28%), Gaps = 34/220 (15%)

Query: 90  NL--YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           N+    SP+ +      +   G  +       G    I     N TG +H GH       
Sbjct: 8   NISTTYSPNEVENKWYKMWEDGKYFRPRPGKTGESYCIIMPPPNVTGRLHAGHALDVTNQ 67

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           DTL       G+E      ++ AG    ++                              
Sbjct: 68  DTLIRWKRMKGFEALWLPGMDHAGIATQSV------------------------------ 97

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V K++  +      +F  E++L  +  +  +    II    K +    D   S      
Sbjct: 98  -VEKQVQAEEGKTRHDFSREEFLEKIWKWK-EEYGGIIAQQQKTMGASPDWDYSMFTMDP 155

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                +R +   L  +G +Y+           Q    D +
Sbjct: 156 EANEAVRKVFVMLYNEGLIYQSDYIINWDTVLQSAISDAE 195


>gi|239832887|ref|ZP_04681216.1| leucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239825154|gb|EEQ96722.1| leucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 883

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 11  RYNPRVAEAHWQKVWEEDRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 70

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 71  RYKRAKGFNV 80


>gi|149204801|ref|ZP_01881764.1| glutamyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149141770|gb|EDM29823.1| glutamyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 470

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 88/292 (30%), Gaps = 44/292 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           +  +   + +PTG +H+G  R A+     A                   G  +  +  + 
Sbjct: 3   QQVVTRFAPSPTGYLHIGGARTALFNWLFAR---------------GRGGKFLLRIEDTD 47

Query: 182 FWRY-QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
             R   +A       L               E AD+++        E        ++ Q 
Sbjct: 48  RARSTPEATQAILDGLAWLGLDHDDKAISQFERADRHAEVARKLLAEGMAYKC--FATQD 105

Query: 241 MMKIIRDDLKALNIQHDIFI-SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            ++  R+  +A            D      P+ +  +I             +  P+   T
Sbjct: 106 EIETFREAARAEGRSTLYHSPWRDATPDQHPTDMPHVI------------RIKAPRDGVT 153

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  +  +  R+  +    D  LL+SDG+  Y    LA     ++ G  ++I   G D
Sbjct: 154 VIRDEVQGDVTIRNDQLD---DMVLLRSDGTPVYM---LAVAVDDHDMGVTHVIR--GDD 205

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           H     R   +  A+          +   + L       K+SKR G      
Sbjct: 206 HLNNAARQMMIYQAMGWPLP-----VYAHIPLIHGPDGKKLSKRHGALGVEE 252


>gi|71895477|ref|NP_001026638.1| probable glutamyl-tRNA synthetase, mitochondrial precursor [Gallus
           gallus]
 gi|82233764|sp|Q5ZJ66|SYEM_CHICK RecName: Full=Probable glutamyl-tRNA synthetase, mitochondrial;
           AltName: Full=Glutamate--tRNA ligase; Short=GluRS;
           Flags: Precursor
 gi|53133796|emb|CAG32227.1| hypothetical protein RCJMB04_20f12 [Gallus gallus]
          Length = 502

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 93/289 (32%), Gaps = 42/289 (14%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            +PTG +H+G  R A+     A      G  V R     D G  +   A S+      A 
Sbjct: 22  PSPTGFLHLGGLRTALYNYVFAKQQR--GTFVLRVE-DTDQGRVVAGAAESIEDMLHWAG 78

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYSVQAMM 242
              D     G   G Y + +  +L    S  LL+       F   + L +++  +++   
Sbjct: 79  IPPDESPRRGGPFGPYQQSLRLDLYRAASEALLDRGAAYRCFCTPQRLELLRKEALRNQQ 138

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               D     N    +   E              +     QG  +   +   + +   + 
Sbjct: 139 TPRYD-----NRCRHLTPKE--------------VAEKLAQGLDW---VVRFRLERGVEP 176

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
             D      +  +   + D  +LK+DG  TY    LA     +  G  +++   G++   
Sbjct: 177 FQDLVYGWNKHEVAEVEGDPVILKADGFPTYH---LANVVDDHHMGISHVLR--GTEWLT 231

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A      Q        + L  +    K+SKR GD    R
Sbjct: 232 STSKHLLLYKAFGWDPPQFGH-----LPLLLNKDGSKLSKRQGDIFLER 275


>gi|52220888|ref|YP_086757.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|222112707|ref|YP_002559294.1| Agrocin 84-resistant leucyl-tRNA synthetase [Agrobacterium
           radiobacter K84]
 gi|41393770|gb|AAS02118.1| probable leucyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|221728484|gb|ACM31456.1| Agrocin 84-resistant leucyl-tRNA synthetase [Agrobacterium
           radiobacter K84]
          Length = 814

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++ ++      +    +  +    G K  +  +    +G +H+GH R   +GDTLA + 
Sbjct: 9   DAFWQQKWDEKRI----FDWDPSSPGKKFYVLEMFPYTSGHLHIGHVRNYSMGDTLARMQ 64

Query: 155 AFSGYEV 161
              GY V
Sbjct: 65  IARGYSV 71


>gi|71894124|ref|YP_278232.1| glutamyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|115305777|sp|Q4A6V0|SYE_MYCS5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|71850912|gb|AAZ43521.1| glutamyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 466

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 96/284 (33%), Gaps = 45/284 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD +  L         +        +Q+  LA 
Sbjct: 9   APSPTGFLHIGGARTALFCYLFAKHFNGDFIFRLED----TDVKRNVEGGEASQLENLAW 64

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    +  ++S L      G Y +    +   +    LL           K+ + +
Sbjct: 65  L-------GIIPDESPLKPNLKYGKYRQSEKLDRYKEVLDMLLE----------KNLAYK 107

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           A    + ++L+A  ++ +        +      I D           +   +  PK K  
Sbjct: 108 AY--DLPEELEAQKLESEQKGFASFRYDPSWLKISDEEKAKRDLNNQFSYRIRMPKDKVF 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ R ++ F S  + D     + KSD   TY   + A     ++    +++   G +
Sbjct: 166 SWNDLVRGEISFSSNEISDW---VIFKSDNYPTY---NFAVVVDDHDMQISHVLR--GEE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           H G   +  A+   ++    Q        + +  D    K+SKR
Sbjct: 218 HIGNTPKQLALYDYLNWSSPQ-----YGHLTIITDMGGKKLSKR 256


>gi|103488497|ref|YP_618058.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123078012|sp|Q1GNP7|SYL_SPHAL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|98978574|gb|ABF54725.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 849

 Score = 42.2 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +   +   +   +      +   K     +E     P+G +H+GH R   +GD LA    
Sbjct: 11  AADARWQKAWEAANSFATTDSGQKPKAYILEMF-PYPSGRIHMGHVRNYAMGDVLARFKR 69

Query: 156 FSGYEV 161
            +G++V
Sbjct: 70  MTGHDV 75



 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           G  IKMSK   + +    ++D+ G+D+VR+ ML     E
Sbjct: 616 GRVIKMSKSKKNVVDPDAILDQYGADAVRWFMLSDSPPE 654


>gi|308159760|gb|EFO62280.1| Valine-tRNA ligase [Giardia lamblia P15]
          Length = 1218

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 56/218 (25%), Gaps = 38/218 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK------GTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +PS + K       +   +  ++           K  +     N TG +H+GH     + 
Sbjct: 62  NPSVIEKSWYEWWEAAGFFSPDMQRNIRSKDSRCKFTLLIPPPNVTGSLHIGHALTNSIQ 121

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       GY   R  Y+            SV  R                       
Sbjct: 122 DALVRWYRMMGY---RTLYL-PGLDHAGIATQSVVERN---------------------- 155

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                + +       +   E++L     +  Q   +I+   L+ L    D   S      
Sbjct: 156 -----IMETEGKTRHDLGREQFLERAWAWKEQFGGRILSQ-LRMLGSSFDWSRSVFTLDS 209

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                  +    L  +G +Y          + Q    D
Sbjct: 210 ARSRVHNESFVKLFNKGLIYRDSRLVNWDCSLQTAVSD 247


>gi|303243869|ref|ZP_07330209.1| valyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485805|gb|EFL48729.1| valyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 885

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 42/198 (21%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             K +         Y      K     I+     PTG MH+GH       D +A     +
Sbjct: 11  FEKEIQKKWEENKIYKFKNDEKRPPYIIDTPPPYPTGRMHLGHALNWTYMDIIARFKRMN 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+                    V +      +   +++      G+    + +    K 
Sbjct: 71  GYD--------------------VLFPQGWDCHGLPTEVKVEEIHGITKSDIDRHEFRKL 110

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
             EL     EK                +R+ +K+L I  D    + ++   +P  ++   
Sbjct: 111 CVELTKENIEK----------------MREQVKSLGISID---WDREYITMNPDYVKKSQ 151

Query: 276 -IIDNLARQGYVYEGILP 292
                +  +G +Y G  P
Sbjct: 152 TAFVRMYNKGLIYRGKHP 169


>gi|296445331|ref|ZP_06887289.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257092|gb|EFH04161.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 871

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +       ++      +      K     +E     P+G +HVGH R   +GD +A    
Sbjct: 9   AAAEPKWRALWEERRAFACGDPQKPKYYVLEMF-PYPSGRIHVGHVRNYSMGDVIARYKR 67

Query: 156 FSGYEV 161
             G++V
Sbjct: 68  AKGFDV 73


>gi|315504173|ref|YP_004083060.1| valyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410792|gb|ADU08909.1| valyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 872

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 52/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      V+G  +  +   +     I     N TG +H+GH     + D L       G
Sbjct: 25  EQRRYEQWVAGGHFRASADSEKPPFTIVIPPPNVTGSLHMGHAFEHTLMDALTRRKKMQG 84

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y                           +AL+    D        +  + +  E   ++ 
Sbjct: 85  Y---------------------------EALWLPGMDHAGIATQNLVERQLAGEGLSRHD 117

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K  S  A++  +R     L    D          G    ++ +  
Sbjct: 118 LGREKFVERVWQ--WKAESGGAILGQMR----RLGDAVDWDRERFTMDEGLSRAVQTMFK 171

Query: 279 NLARQGYVYEG 289
            L   G +Y  
Sbjct: 172 KLFDDGLIYRA 182


>gi|269792690|ref|YP_003317594.1| glutamyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100325|gb|ACZ19312.1| glutamyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 445

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 68/249 (27%), Gaps = 52/249 (20%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDI-------FISEDDFHRGDPSPIRDIIDNLARQGYV 286
           ++ S     K I + LK L +  D        +       R D        + L  +G  
Sbjct: 48  RERSTAEYEKTILEGLKWLGLDWDEGPDVGGPYGPYRQSERLDTYGRYA--EELIEKGLA 105

Query: 287 Y-EGILPPPKSKTTQKCDMDRKQLL--------FRSTMVGDDVDRPLLKSDGSYTYFAAD 337
           Y E      +  T +K + +                   G   D  ++KSDG  TY   +
Sbjct: 106 YREDGAVLFRIPTGEKVEFNDAVYGPISVMSDHVSVNKDGSIKDMVIIKSDGMPTY---N 162

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
            A     +  G + +I   G DH     +   +  A+  +           + +      
Sbjct: 163 YAVVVDDHCMGINWVIR--GEDHVINTPKQILLYRALGWQVPNFAH-----LPMILGKDK 215

Query: 398 IKMSKRAGDFITLR------------------------HVVDEVGSDSVRFMMLWRKNSE 433
            K+SKR G                                      ++ +   + +    
Sbjct: 216 KKLSKRHGATSVFEYHGLGYIPEGVFNFLALLGWSPGADREIITRHEAAKVFDITKVTKR 275

Query: 434 LLDFDFCKV 442
              FD  K+
Sbjct: 276 AAVFDMDKL 284


>gi|257063479|ref|YP_003143151.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791132|gb|ACV21802.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 526

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 112/366 (30%), Gaps = 85/366 (23%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           +         I +V+A P    H+G     +  DT+A     +GY+V     +++ G +I
Sbjct: 2   SKPMYSFTTPIYYVNAAP----HLGTAYTTIAADTVARYQRMNGYDVAFVTGLDEHGQKI 57

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
              A        +          +   P         ++ D   ++ +    ++    V+
Sbjct: 58  AETA--------EKNGTTPQAWCDSMVPA---FDEAWDMLDITYTDFVRTSSDRQTRTVQ 106

Query: 235 DYSVQAMMK--IIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            +      K  + +   +    +  + + +E D  + +                     +
Sbjct: 107 KFWNDIYEKGYLYKSAYEGWYCVHEETYYAESDLEKNEDGE-----------------FI 149

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGD----------DVDRPLLKSDGSYTYF---AADL 338
            P   +  +      +   F+ +   +          D  RP  + +   T+      DL
Sbjct: 150 CPDCKRPVRHMASGEENWFFKLSEFQEPLLKFYEEHPDFIRPETRRNEVVTFVKSGLQDL 209

Query: 339 AYFKCKYERG----FD--NMIYVM--------------GSDHSGYV-KRLEAVAAAVSEK 377
           +  +  ++ G    FD  ++ YV                 +  G    R       V + 
Sbjct: 210 SISRSTFDWGIPLPFDEGHVCYVWADALLAYLTGIGYADPEREGEFEARWPMQYHFVGKD 269

Query: 378 KAQINVLLCELVRLYRDGMPI---------------KMSKRAGDFITLRHVVDEVGSDSV 422
             + + ++     L   G+P+               KMSK  G+ I    +V   GSD+ 
Sbjct: 270 ITRFHCVIWPA-MLMAAGLPVTGTVFGHGFLLVGGEKMSKSKGNGIKPADLVKVYGSDAY 328

Query: 423 RFMMLW 428
           R+  + 
Sbjct: 329 RYYFMS 334


>gi|157736663|ref|YP_001489346.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980074|sp|A8ERV3|SYL_ARCB4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157698517|gb|ABV66677.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 821

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+S    +K  +    +      +   K  K  +      P+G +H+GH R   +GD  A
Sbjct: 3   YISKDIEKKWQNFWSENQSFEPSSSKTKEKKYILSMF-PYPSGRIHMGHVRNYCIGDAFA 61

Query: 152 SLMAFSGYEV 161
                S + V
Sbjct: 62  RHFRKSDFNV 71


>gi|153008429|ref|YP_001369644.1| leucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166231624|sp|A6WXW1|SYL_OCHA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151560317|gb|ABS13815.1| leucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEEDRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|303237347|ref|ZP_07323917.1| isoleucine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482734|gb|EFL45759.1| isoleucine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 1222

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 65/285 (22%), Positives = 101/285 (35%), Gaps = 44/285 (15%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     +++ D    E     V   +   E A K      N  +
Sbjct: 575 LNDW-----NLSRSRFWGTPLPIWH-DGKRNEKCIGSVEELYNEIEKAVKAGVMKSNPLK 628

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS-EDDFHRGDPSPIRDIIDN----LA 281
           E+   I+ DYS +      R DL    +   + I+ E +  + +   I    D+     A
Sbjct: 629 ERGF-IIGDYSQE---NYDRIDLHRPYVDEIVLINDEGEPMKREDDLIDVWFDSGSMPYA 684

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           +  Y +EG +           + + +Q L  S   G  V      +D             
Sbjct: 685 QLHYPFEGEISKEGLAKLGVKEEEYRQQLVASNYEGMAVPPAFYPAD------------- 731

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                      I   G D   G+   L A+A  V +  A  NV+   LV    D    KM
Sbjct: 732 ----------FINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKM 777

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+      ++++ G+D VRF M+      + L FD   V E
Sbjct: 778 SKHVGNVTNPFEMMEKYGADPVRFYMMTNSEPWDNLKFDPEGVDE 822


>gi|295105908|emb|CBL03451.1| Isoleucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 945

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 22/172 (12%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +     +          +V+ C       D    KMSK AG+ +    
Sbjct: 565 YLEGSDQHRGWFQSSLLTSMGAYGVPPYKSVMHCGFTM---DAEGKKMSKSAGNGVDPAD 621

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+ + G+D +R  +     S+ ++    ++ E++ E        AY R R+  R    + 
Sbjct: 622 VMAKSGADVLRLWVASVDYSQDVNIG-DEILERTSE--------AYRRIRNTMRFL--LG 670

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIV--HLAEYPRV-IENATIAQEPYKL 521
              DFD     V    +     +  ++   HL     V +E A    + + +
Sbjct: 671 SLSDFDDLKHTVTDWNALEPVDQWAMVRLWHLL----VDVERAYDEYKFHMV 718


>gi|288926275|ref|ZP_06420200.1| glutamate--tRNA ligase [Prevotella buccae D17]
 gi|288336966|gb|EFC75327.1| glutamate--tRNA ligase [Prevotella buccae D17]
          Length = 505

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 102/294 (34%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFAR--QHGGEFVFR---IEDTDSHRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +R+    ++       G   G Y +   +E+  +Y  +LL+          
Sbjct: 55  GAEEYIIESFRWLGIPFDEGVSF--GGDHGPYRQSERREIYKQYVRQLLDSG-----KAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +     ++  R++++    Q+D         R   +  ++ +D L   G  +      
Sbjct: 108 IAFDTPEELEAKRNEIENF--QYDARTRMQ--MRNSLTLPKEEVDRLMADGEQFTVRFKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     DM R  +  +S ++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPGQEVHVDDMIRGDVRVKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRAFGWEDTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|257470691|ref|ZP_05634781.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064897|ref|ZP_07929382.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690573|gb|EFS27408.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 869

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                K     V   I    N +       +  +   P+G +HVGH R   +GD ++   
Sbjct: 7   KEVEAKWQKKWVDGNIFRTENSVPGKENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYK 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMKGYNV 73


>gi|262196375|ref|YP_003267584.1| valyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262079722|gb|ACY15691.1| valyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 959

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 65/242 (26%), Gaps = 43/242 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I     N TG +H+GH     V D L       G++                    
Sbjct: 48  EPFVIVIPPPNITGRLHMGHALNDTVQDALTRYKRMDGFD-------------------- 87

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                  AL+   +D        V  KH+     D    +      E  +  +  +  Q 
Sbjct: 88  -------ALWVPGTDHAGIATQSVVKKHL-----DAQGVDYQELGREGMVERIWAWREQF 135

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP-------- 292
              II + L+ +    D   +      G    +R     L   G +Y G           
Sbjct: 136 GGAII-EQLRRIGCSCDWSRTRFTMDEGLNQAVRHAFVRLYEDGLIYRGKRIVNWCPVDK 194

Query: 293 -PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                    K D+  K    R     D+ D  L+ S         D+A      +    +
Sbjct: 195 TALSDDEVDKEDISAKMYNLR-YPFADEPDAHLVVSTTRPETLFGDVAVAVNPDDPEKKH 253

Query: 352 MI 353
           +I
Sbjct: 254 LI 255


>gi|150403520|ref|YP_001330814.1| valyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150034550|gb|ABR66663.1| valyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K +         +      K     I+     PTG MH+GH       D +A     +
Sbjct: 11  LEKKVQEKWEDEKTFKFLEDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+                    V +      +   +++       +    + +    ++
Sbjct: 71  GYD--------------------VLFPQGWDCHGLPTEVKVEELNNITKSDIDRH---EF 107

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
               +   +E              ++ +R+ +K+L I  D    + ++   +P  +R   
Sbjct: 108 RRLCVELTDEN-------------VEKMRNQVKSLGISID---WDREYITMNPDYVRKSQ 151

Query: 276 -IIDNLARQGYVYEGILP 292
                +  +G +Y G  P
Sbjct: 152 TAFLKMYEKGLIYRGKHP 169


>gi|127512032|ref|YP_001093229.1| isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229769|sp|A3QBX2|SYI_SHELP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126637327|gb|ABO22970.1| Isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 940

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 18/186 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+      ++ A++ K     VL         DG   KMSK  G+ I   
Sbjct: 561 LYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF---TVDGQGRKMSKSIGNVIAPL 617

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V +++G+D +R  +     S  +     ++ ++S +        AY R R+  R     
Sbjct: 618 QVTNKLGADILRLWVAATDYSGEMTVS-DEILKRSAD--------AYRRIRNTARFLLAN 668

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS- 530
               D    P N      +    +  ++   A     I  A      + +   L    S 
Sbjct: 669 LNGFD----PVNDTVAIEDMVALDRWVVRRAAALQAEILEAYEQYNFHLVTQKLMQFCSV 724

Query: 531 VFHGHW 536
                +
Sbjct: 725 ELGSFY 730


>gi|325126199|gb|ADY85529.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 804

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 37/174 (21%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRA 404
           +Y+ G++H+     Y +    V   +     +         +LY  G+      KMSK  
Sbjct: 524 LYIGGAEHATLHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKNHEKMSKSR 578

Query: 405 GDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
           G+ +    VVDE G+DS+R + M     +  +D+D         +N             S
Sbjct: 579 GNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWD---------DNGP-----------S 618

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
             ++  D       +    + IP E   D ++ +L      Y   ++  T   E
Sbjct: 619 GVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKI---YNETVKTVTEHFE 669


>gi|313117266|ref|YP_004044249.1| FAD/FMN-dependent dehydrogenase [Halogeometricum borinquense DSM
           11551]
 gi|312294157|gb|ADQ68588.1| FAD/FMN-dependent dehydrogenase [Halogeometricum borinquense DSM
           11551]
          Length = 1010

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 21/209 (10%)

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL-----PEGYYPGVYLKH- 208
             SGY + R  Y NDAG ++  LA              +++L     PE     +Y    
Sbjct: 251 RVSGYNLDRVVYENDAGERVMNLATLFVGSEGTLGVIVEAELSLVTVPEETALALYCFDD 310

Query: 209 -----VGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFIS 261
                    +A +Y    +   +++   +    D   + +  I      AL ++ D    
Sbjct: 311 LVTAMEAVPVALEYDVSAVELMDDEVFRLAANSDGYAEYVEPIPEGTDAALLLEFD---- 366

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             + H    + I    +     G  +E +     +       + +  +    ++ GD   
Sbjct: 367 -SELHDDFEAAIDATTERFIHDGAAFEVVEAYTDADQADIWKLRKAAIPLLMSLEGDAKP 425

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFD 350
            P ++     T   A+LA +  K+E   D
Sbjct: 426 YPFIED---ATVPPAELAAYVQKFEAVLD 451


>gi|226311582|ref|YP_002771476.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782487|sp|C0ZB13|SYL_BREBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226094530|dbj|BAH42972.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 805

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  YF   +     K     D +       IY+ G++H+     Y +        +   
Sbjct: 495 GSCWYFLRFIDPHNDKALADPDKLKEWLPIDIYIGGAEHAVLHLLYSRFWHKFLYDIGVV 554

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    ++D  G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIIDSHGADTLR 600


>gi|166713428|ref|ZP_02244635.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 1004

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 56/214 (26%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS     L +   +   +  +  G+   V +     N TG +H+GH     + D L   
Sbjct: 9   DPSSFESRLYAQWEAAGYFVPSGTGEPYTVLL--PPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        + ++  V ++   +    I   ++ L    D   S         + +
Sbjct: 107 ----------LGRDGFIAKVWEWKAASG-DTIERQMRRLGTSSDWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|254302086|ref|ZP_04969444.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322278|gb|EDK87528.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 859

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWSKDNIFKTENQVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|114799286|ref|YP_762228.1| leucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123128248|sp|Q0BWB5|SYL_HYPNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114739460|gb|ABI77585.1| leucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 855

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 27/122 (22%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            R       +   +  ++  G      +E     P+G +H+GH R   +GD +A      
Sbjct: 14  WRDAWEKADIFRTKAPKDAPGAPKAFVLEMF-PYPSGRLHMGHVRNYAMGDVVARHKRAK 72

Query: 158 GYE------------------VTREYYINDA--------GAQINTLALSVFWRYQQALYN 191
           GY                   + R+ +             AQ   L LS+ W  + A  +
Sbjct: 73  GYNVLHPMGWDAFGMPAENAAMERKVHPGKWTYANIESMKAQFRKLGLSLDWSREFATCD 132

Query: 192 ND 193
            D
Sbjct: 133 PD 134


>gi|90579894|ref|ZP_01235702.1| glutamyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438779|gb|EAS63962.1| glutamyl-tRNA synthetase [Vibrio angustum S14]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 91/279 (32%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLYA---KHMGGEFVLR--IED--TDLERSTQEAIDAIMEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   + +  EG Y          E+ D+         E+K       Y  + ++  IR++
Sbjct: 61  MEWLELNWDEGPYYQTKRFDRYNEVVDQL------LAEDKAYKC---YCPKELLDEIREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  I+           R D +  + +  N A        I      + T   D   + 
Sbjct: 112 QMAAGIKP----------RYDANNPKIVAANAAATEDSPFCIRFRNPKEGTVVFDDKIRG 161

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  +    D  D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 162 HIEIANSELD--DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        + L  DG   K+SKR G  
Sbjct: 215 NIYKALGAPVPEFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|74420524|gb|ABA04723.1| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 692

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 102/331 (30%), Gaps = 48/331 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-------NTLALSVFWR 184
           P G  H+GH   A+  D LA      G +V      ++ G ++       N  AL +  R
Sbjct: 192 PNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQRENISALELATR 251

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             + L   D  L   +    +++                      + +    S  +    
Sbjct: 252 NAELLRKLDEALDISFDR--FIRTSESAHHRSVQDIWKRMAGNGDIYL----SNYSGWYS 305

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKC 302
           +RD  +A   + +  + ED+  RG      + ++  +   +   YE  L           
Sbjct: 306 VRD--EAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEPDFI 363

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKS--------------------DGSYTYFA----ADL 338
             D ++    S + G   D  + ++                    D    Y       D 
Sbjct: 364 GPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGFPDE 423

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                ++    D  I+++G D    + R  AV        A I +        +      
Sbjct: 424 DESNWRF-WPAD--IHIIGKD----IIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGE 476

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ +    +  + G D +R+  L  
Sbjct: 477 KMSKSVGNVVDPFSLAAQYGVDQMRYFFLRE 507


>gi|50086110|ref|YP_047620.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|60390694|sp|Q6F817|SYL_ACIAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49532086|emb|CAG69798.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 873

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRN----LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++   Y    + S + +  E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDAEYQANAIESQIQNDWENRKAFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|312876620|ref|ZP_07736601.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796573|gb|EFR12921.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 465

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 124/374 (33%), Gaps = 58/374 (15%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWRYQQALYN 191
           +H+G+ R  +V DTL     + GYEV       D   ++    N   ++VF   ++ +  
Sbjct: 35  IHIGNARPLIVFDTLRRYFEYKGYEVIYIQNFTDVEDKMINRANKEGITVFELARRFIE- 93

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                        Y K   +    + +       E +         +  + ++I     A
Sbjct: 94  ------------EYYKDADRLNVKRATKNPRATEEIED-------MIALIQRLIDKGY-A 133

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++     F        ++I + +A       G    P  K     D     +L+
Sbjct: 134 YVVDGDVYFRTRKFAEYGKLSHKNIEELMA-------GARVDPNEKKEDPLDF----VLW 182

Query: 312 RSTMVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
           ++   G+     P  +    +    + +A    KY       I +            E  
Sbjct: 183 KAKKEGEPAWSSPWGEGRPGWHIECSVMA---MKY---LGETIDIHAGGQDLIFPHHENE 236

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            A       +       L   Y +    KMSK  G+F T+R ++++   +++R  ML   
Sbjct: 237 IAQSEAATGKPFARFW-LHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAH 295

Query: 431 NSELLDFDFCKVKEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
             + L+F    +++            EN  F +Q A +   S      D       DL  
Sbjct: 296 YRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSES-----DDKLKAAIEDLKA 350

Query: 482 RNVIPQESEFDTSE 495
           + +   E + +T+E
Sbjct: 351 KFIEAMEDDLNTAE 364


>gi|296328927|ref|ZP_06871435.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153916|gb|EFG94726.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 859

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWSKDNIFKTENQVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|189083241|sp|Q47IN0|SYL_DECAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R        +G         K     +      P+G +H+GH R   +GD L+      G
Sbjct: 12  RAAQQHWDKTGAARAVEDATKPKYYCLSMF-PYPSGKLHMGHVRNYTIGDVLSRFHKMQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|150401370|ref|YP_001325136.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166229747|sp|A6UVK2|SYI_META3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150014073|gb|ABR56524.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 1040

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 7/129 (5%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMP 397
           A    K  +  D +  V G+D    V +      A+SE     I    C +     D   
Sbjct: 549 ASINAKELKKADFI--VEGNDQ---VTKWFYSQHALSEIVFDDIPYKKCMMHGFTLDETG 603

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQY 456
            KMSK  G+ +    VV+E G+D +RF +L    + E L F   ++ +        +  Y
Sbjct: 604 EKMSKSIGNVVNPDDVVEEFGADLLRFYLLSANKAWEDLRFSIGEMNDVKSVFNTLWNSY 663

Query: 457 AYARCRSIF 465
           ++A    + 
Sbjct: 664 SFAVNYMVL 672


>gi|71906184|ref|YP_283771.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|71845805|gb|AAZ45301.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 876

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R        +G         K     +      P+G +H+GH R   +GD L+      G
Sbjct: 18  RAAQQHWDKTGAARAVEDATKPKYYCLSMF-PYPSGKLHMGHVRNYTIGDVLSRFHKMQG 76

Query: 159 YEV 161
           Y V
Sbjct: 77  YNV 79


>gi|15605863|ref|NP_213240.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|6226187|sp|O66680|SYLA_AQUAE RecName: Full=Leucyl-tRNA synthetase subunit alpha; AltName:
           Full=Leucine--tRNA ligase subunit alpha; Short=LeuRS
 gi|2983033|gb|AAC06643.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 634

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
            +P  + K           +            +E     P+G +H+GH R   +GD +A 
Sbjct: 5   FNPREIEKKWQKRWEEAGVFKAQEGKPNKFYVLEMF-PYPSGRIHMGHVRNYTIGDAIAR 63

Query: 153 LMAFSGYEV 161
            +   G  +
Sbjct: 64  YLKMRGKNI 72


>gi|19704849|ref|NP_602344.1| leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|32171570|sp|Q8RIQ3|SYL_FUSNN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19712730|gb|AAL93643.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 859

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 12  KWQERWSKDNIFKTENQVEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|323493149|ref|ZP_08098280.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312620|gb|EGA65753.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 686

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLQEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 253

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFIKAATYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D +  + +R+    + NS + D D        + N
Sbjct: 348 DHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|288928060|ref|ZP_06421907.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330894|gb|EFC69478.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 1146

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 33/244 (13%)

Query: 230 LPIVKDYSVQAMM-----KIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLAR 282
           LPI +D   + +      ++  +  K++   H     + E  F  G+ +  +D  + +  
Sbjct: 534 LPIWRDEDGREICIGSLEELYSEIEKSVAAGHMSSNPLKEQGFVPGNYA--QDNYERIDL 591

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
                + I+   ++    K +MD   + F S  +             +  ++  + A   
Sbjct: 592 HRPYVDDIVLVSEAGKPMKREMDLIDVWFDSGAMPY-----------AQVHYPFENAELI 640

Query: 343 CKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            K      + I   G D   G+   L A+A  V +  A  NV+   LV    D    KMS
Sbjct: 641 DKRIAFPADFINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMS 696

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFY 453
           K  G+ +    ++++ G+D VR  ML      + L FD   V E  ++          F+
Sbjct: 697 KHVGNVVNPFEMMEKYGADPVRMYMLTNSEPWDNLKFDAESVDEIRRKLFGTLYNTYSFF 756

Query: 454 VQYA 457
             YA
Sbjct: 757 ALYA 760


>gi|225848404|ref|YP_002728567.1| valyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644293|gb|ACN99343.1| valyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 973

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 57/208 (27%), Gaps = 33/208 (15%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   S V       +   G+     +     N TG +H+GH   A + D +       G+
Sbjct: 11  ENKWSSVYKENPIFKGKTGEKPYFCVVLPPPNVTGSLHIGHALNATLQDIIVRYKRMKGF 70

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                          +   ++  W   + L                          K   
Sbjct: 71  NTL-------WLPGFDHAGIATQWVVVRELQ-------------------------KQGI 98

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
              +   E ++  V ++  ++    I++ L  L    D          G    +R+    
Sbjct: 99  SRFDLGRENFIKKVWEWVPKS-RDSIKNQLIRLGASCDWSRQRFTLDEGFSRSVREAFVR 157

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L ++G +++           +    D +
Sbjct: 158 LYKEGLIFKAPYIVNWDPKERTAISDLE 185



 Score = 38.4 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    ++     +V +  LV   RD    KMSK  G+
Sbjct: 577 TGFD-IIFFW-------VARMIMMGTKFTDNIPFHDVYIHALV---RDEKGEKMSKTKGN 625

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    + ++ G+D++RF +
Sbjct: 626 VIDPLEMAEKYGADALRFTL 645


>gi|254486586|ref|ZP_05099791.1| leucyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043455|gb|EEB84093.1| leucyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 848

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 82/268 (30%), Gaps = 47/268 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------- 152
           +  ++     I        K     +E     P+G +H+GH R   +GD +A        
Sbjct: 12  RWQAAWEKDSIFQAVRSADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKIATGH 70

Query: 153 -LMAFSGYEVTR---EY-------------YIN--DAGAQINTLALSVFWRYQQALYNND 193
            ++   G++      E              Y N  D   Q+  L LS+ W  + A  + +
Sbjct: 71  SVLHPMGWDAFGMPAENAAMAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFATCDPE 130

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
               +      +LK         Y    +   +   + ++ +  V+A        L    
Sbjct: 131 YYGQQQALFLDFLKEGLV-----YRKNAIVNWDPVDMTVLANEQVEAGRGWRSGALVERR 185

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--------------GILPPPKSKTT 299
                F    D+     + + D +DN   +  + +                +  P     
Sbjct: 186 ELTQWFFKISDYSEDLLNAL-DTLDNWPAKVKLMQANWIGKSRGLQFAFSTIDAPDGFDR 244

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
            +    R   L  ++ VG   D PL KS
Sbjct: 245 IEVYTTRPDTLLGASFVGISPDHPLAKS 272


>gi|187736142|ref|YP_001878254.1| leucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426194|gb|ACD05473.1| leucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 857

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +           L+ + + L  DG   KMSK  G+
Sbjct: 565 LYVGGTEHAVLHLLYARFWHKVLFDLGYLSTNEPFQKLVNQGLILGEDGQ--KMSKSRGN 622

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V E G+DS+R
Sbjct: 623 VVNPDDIVREYGADSLR 639


>gi|154354318|gb|ABS76246.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5323]
 gi|154354320|gb|ABS76247.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5321]
 gi|154354322|gb|ABS76248.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5324]
 gi|154354324|gb|ABS76249.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5326]
 gi|154354326|gb|ABS76250.1| arginyl tRNA synthetase [Mastigocladus laminosus CCMEE 5272]
          Length = 130

 Score = 42.2 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 23  KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81
           K+E     +  + + R+       T  A+ LS+   +  + IAE I + +  +     ++
Sbjct: 30  KIESLANKKFPLSKGRNSNQVFYITGLALQLSKYEKIPAMEIAEAIASHLSANSARVFTI 89

Query: 82  FIAGKGFINLYLSPSYLRKILSSIVV 107
            I   G+I+L L+   L   L  +V 
Sbjct: 90  RIVSPGWIHLELTHPVLAGWLQRLVE 115


>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 929

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 72/227 (31%), Gaps = 54/227 (23%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +  + EG   P         +MD   + F S               GS  +       
Sbjct: 505 EAKDLLPEGFTHPASPNGEFTKEMDIMDVWFDS---------------GSSHH-----GV 544

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            + + +  F   +Y+ GSD   G+       + AV+ +    +VL    V    DG   K
Sbjct: 545 LRTREDLTFPADMYLEGSDQYRGWFHSSLLTSVAVNNEAPYRSVLSQGFVN---DGEGRK 601

Query: 400 MSKRAGDFITLRHVVDEVGSDSVR--------FMMLWRKNS------------------- 432
           MSK  G+ ++   V+ + G+D +R        +  +   +                    
Sbjct: 602 MSKSIGNTVSPNDVIKQRGADILRLWVSSVDTYYDVRISDDILGQVAENYRRIRNTVRFL 661

Query: 433 --ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
              L DFD  K      E+     QY   R   + R  +  +   DF
Sbjct: 662 LGNLYDFDAKKDAVA-YEDLASIDQYMMNRLNEMVRNVRHAYDTFDF 707


>gi|153952241|ref|YP_001398097.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939687|gb|ABS44428.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 628

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 98/322 (30%), Gaps = 42/322 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---TLALSVFWRYQQALYNND 193
           H+GH    ++ DTLA      G+E       ++ G +I     L  S    Y   +    
Sbjct: 16  HLGHAYTTIIADTLARFYRLQGHETKFLTGTDEHGQKIEEAAKLRNSTPQEYANKISFEF 75

Query: 194 SDLPEGYY--PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             L +       +Y +       +   +  L   ++    I KD                
Sbjct: 76  KKLWDELEISYDIYARTTNTMHIEFVKAMFLKMWQKG--DIYKDEYEGHYCISCESFFTQ 133

Query: 252 LNIQHDIF----------ISEDDFHRGDPSPIRDIIDNLARQ-------------GYVYE 288
             + ++            + E+ +          I+     +              +V  
Sbjct: 134 SQLINNCSCPDCGKNTTILKEESYFFRLSKYQDKILQWYEEKDPILPKNKKNELINFVQS 193

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA-DLAYFKCKYER 347
           G+     ++T+    +   Q       + D      +  D  + Y ++ D      K + 
Sbjct: 194 GLKDLSITRTSFDWGIKLPQ------EMNDPKHIIYVWLDALFIYISSLDFQSKGEKAKF 247

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
              + +++ G D    + R  A+          + +        +      KMSK  G+ 
Sbjct: 248 WPAH-VHLAGKD----ILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNV 302

Query: 408 ITLRHVVDEVGSDSVRFMMLWR 429
           +  + VVD  GS++ R+ +L  
Sbjct: 303 VKPKEVVDAYGSEAFRYFLLRE 324


>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 930

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       A           VL    V    DG   KMSK  G+ +   
Sbjct: 558 LYLEGSDQHRGWFHSSLLAAVGTRGVAPYKAVLTHGFVV---DGNGRKMSKSQGNVVAPD 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+++ G++ +R  +  +   + +      ++  S          AY R R+  R    +
Sbjct: 615 AVINKFGAEVLRLWVAAQDYQDDIRISQEILQRLSD---------AYRRIRNTAR--YIL 663

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
               DFD    +V   +   +     L   L      +E A    E + L
Sbjct: 664 SNIYDFDPATDSVADGD-LLELDRWAL-SRLESLVGRVEKAYNDYEFHML 711


>gi|99079886|ref|YP_612040.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379171|sp|Q1GKN8|SYL_SILST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|99036166|gb|ABF62778.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 857

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 82/261 (31%), Gaps = 34/261 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            +   +   + I   +    K     +E     P+G +H+GH R   +GD +A       
Sbjct: 11  ARWQKAWEEAAIFQAKEDHSKPKYYVLEMF-PYPSGKLHMGHVRNYTMGDVIARYKLSTG 69

Query: 153 --LMAFSGYEVTREY----------YINDA--------GAQINTLALSVFWRYQQALYNN 192
             ++   G++               +  D           Q+  L LS+ W    A  + 
Sbjct: 70  HNVLHPMGFDAFGMPAENAAMASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDP 129

Query: 193 D------SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +      +   +    G+  +       D     +L   + +     +  ++    ++ +
Sbjct: 130 EYYGQQQALFLDFLEKGLVYRKNAVVNWDPVDMTVLANEQVENGRGWRSGALVERRELTQ 189

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              K ++   D  +   D     P+ +R + +N   +    +        +   +    R
Sbjct: 190 WFFK-ISDYSDELLEALDGLENWPAKVRLMQENWIGKSRGLQFSFERTDGEEAIEVYTTR 248

Query: 307 KQLLFRSTMVGDDVDRPLLKS 327
              L  ++ VG   D P+ K 
Sbjct: 249 PDTLMGASFVGISPDHPIAKK 269


>gi|302869352|ref|YP_003837989.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572211|gb|ADL48413.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 872

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 52/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      V+G  +  +   +     I     N TG +H+GH     + D L       G
Sbjct: 25  EQRRYEQWVAGGHFRASADSEKPPFTIVIPPPNVTGSLHMGHAFEHTLMDALTRRKKMQG 84

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y                           +AL+    D        +  + +  E   ++ 
Sbjct: 85  Y---------------------------EALWLPGMDHAGIATQNLVERQLAGEGLSRHD 117

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K  S  A++  +R     L    D          G    ++ +  
Sbjct: 118 LGREKFVERVWQ--WKAESGGAILGQMR----RLGDAVDWDRERFTMDEGLSRAVQTMFK 171

Query: 279 NLARQGYVYEG 289
            L   G +Y  
Sbjct: 172 KLFDDGLIYRA 182


>gi|260549055|ref|ZP_05823276.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407783|gb|EEX01255.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|169634386|ref|YP_001708122.1| leucyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688110|sp|B0VKP9|SYL_ACIBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169153178|emb|CAP02268.1| leucyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|160915682|ref|ZP_02077890.1| hypothetical protein EUBDOL_01691 [Eubacterium dolichum DSM 3991]
 gi|158432158|gb|EDP10447.1| hypothetical protein EUBDOL_01691 [Eubacterium dolichum DSM 3991]
          Length = 486

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 110/357 (30%), Gaps = 88/357 (24%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MH+G+ R A+          GD +  +               D    +     
Sbjct: 9   APSPTGYMHIGNLRTALFEYLIAKHEDGDFILRIEDT------------DQERLVEGAVD 56

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            ++   +    N+D     G   G Y++     +   Y+ +L+      +      +  +
Sbjct: 57  IIYDTMKAVGLNHDEGPDIGGDFGPYVQSERLSMYKGYADQLVELGGAHYC-----FCSE 111

Query: 240 AMMKIIRDDLKALNIQH-------DIFISE--DDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++  R + ++L I          I I E       G+   +R  I      G  Y   
Sbjct: 112 EEIEAQRKEAESLGISFKYDDPCKHISIEEARKRIADGEKYVVRQTI---KANGETYFD- 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                 +   + ++D   L           +  LLKSDG  TY  A++      ++    
Sbjct: 168 -----DEVYGRIEVDNATL----------DESVLLKSDGFPTYNFANI---IDDHQMQIS 209

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT- 409
           ++  V G+++     +   +  A         +     V         K+SKR GD    
Sbjct: 210 HV--VRGNEYLSSTPKYNLIYQAYGWD-----IPTYVHVPPVMKDEQHKLSKRNGDASFQ 262

Query: 410 --------LRHVVDEVG---------------SDSVRFMMLWRKNSELLDFDFCKVK 443
                      +++ +                 + ++   + R +     FD  K+ 
Sbjct: 263 DLVKKGYLPEAILNYIALLGWAPESEQEIYSLEELIKVFDIKRISKSPAIFDIDKLT 319


>gi|110679054|ref|YP_682061.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|109455170|gb|ABG31375.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 1031

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV+ +K    V +  LV   RD    KMSK  G+
Sbjct: 624 TGFD-IIFFW-------VARMMMMQYAVTGQKPFSTVYVHALV---RDEKGKKMSKSLGN 672

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    ++DE G+D+VRF +
Sbjct: 673 VIDPLDMIDEFGADAVRFTL 692


>gi|34541247|ref|NP_905726.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417092|sp|Q7MUD3|SYI_PORGI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34397563|gb|AAQ66625.1| isoleucyl-tRNA synthetase, putative [Porphyromonas gingivalis W83]
          Length = 1137

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 12/112 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +S   +   V+   LV    D    KMSKR G+ +     + 
Sbjct: 648 GVDQTRGWFFTLHAIATMISGTSSFKVVVSNGLV---LDKKGNKMSKRLGNAVDPFETIK 704

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA  
Sbjct: 705 KYGSDPLRWYMITNSSPWDNLKFDTDGVEEVRRKFFGTLYNTYQFFALYANL 756


>gi|121602880|ref|YP_988442.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166230611|sp|A1UR39|SYL_BARBK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120615057|gb|ABM45658.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 875

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    +   +I      +  +   +G K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRAQEQKWQAIWDEKKIFQTSHEDEGEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 65  RYKRAKGMNV 74


>gi|306844787|ref|ZP_07477372.1| leucyl-tRNA synthetase [Brucella sp. BO1]
 gi|306274959|gb|EFM56729.1| leucyl-tRNA synthetase [Brucella sp. BO1]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  +      +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVVEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|289191087|gb|ADC93656.1| aminoacyl tRNA synthetase AK-2 [synthetic construct]
          Length = 860

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     VS  P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|284162686|ref|YP_003401309.1| lysyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012683|gb|ADB58636.1| lysyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 496

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 112/330 (33%), Gaps = 50/330 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLAS-LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           P+GP+H+G+ R  +  D +   ++   G       Y+ D     + L     + +    Y
Sbjct: 29  PSGPIHIGNLREMLTADAIRRAIIDKGG--KAEIVYVADT---FDPLRR--RYPFLPKEY 81

Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                +P    P    +      A+ +    L   E   +P+V   + +       +++ 
Sbjct: 82  EEYVGMPLSLIP--DPEDCHDNYAEHFLQPFLESLEILEIPVVVKKADEMYRNGEYEEVT 139

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK---TTQKCDMDRK 307
            +++Q           R + + I + +     +   Y  +      K   TT+    D K
Sbjct: 140 KISLQ----------QRDNIARILEEVTGRKIESDWYPFMPLCKNCKRLTTTKIVSFDDK 189

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-----GSDHSG 362
           ++ +  +  GD+         G  +Y    L     + +      I  +     G DH+ 
Sbjct: 190 RISYVCS-CGDE---------GEVSYREGKL---VWRVDWPARWRILGITCEPFGKDHAS 236

Query: 363 ----YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
               Y             +      +  E + L   G    MS   G  + +R  ++ V 
Sbjct: 237 AGGSYDTGKRLAREIFGIEPPYP--VPYEWINLKGVGA---MSSSKGVVVPVREFIEIVP 291

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            + VR+M++  K  + +DFD   + E   E
Sbjct: 292 PEIVRYMIIRVKPKKHIDFDPANLLELVDE 321


>gi|239500747|ref|ZP_04660057.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|238761813|ref|ZP_04622787.1| Valyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238699927|gb|EEP92670.1| Valyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 965

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  + + L         +  N         I     N TG +H+GH     + DTL 
Sbjct: 18  TYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLI 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++    ++  +  +  ++   I R  ++ L    D          G  +
Sbjct: 107 KIAAEEGKTRHDYGRNAFIDKIWQWKGESGGTITRQ-MRRLGNSVDWERERFTMDDGLSN 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++++   L ++  +Y G          +    D +
Sbjct: 166 AVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|262199048|ref|YP_003270257.1| isoleucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262082395|gb|ACY18364.1| isoleucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 1031

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 342 KCKYERGF--DNMI-YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
           + ++E  +  D ++ YV  +   G+   L A+A+ +  +K     ++C  V L  DG   
Sbjct: 538 RERFEDNYPGDFIVEYV--AQTRGWFYTLVALASGL-FEKEPFRNVVCHGVLLAEDGR-- 592

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
           KMSKR  ++     +V E GSD++R  +L        D  F +V    
Sbjct: 593 KMSKRLRNYPDPMELVSEYGSDALRIGLLSSAVVRGTDARFSRVAVHD 640


>gi|295657888|ref|XP_002789508.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226283263|gb|EEH38829.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 1024

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 59/208 (28%), Gaps = 27/208 (12%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +S +   K L         + R L     +  +        G +HVGH    ++ D + 
Sbjct: 26  RVSQADQAKYLVRCTDDLYTWQRRLRPIENRFVLHDGPPYANGDLHVGHALNKILKDIVC 85

Query: 152 SLMAFSGYEVTREYYINDA---GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +   +G    R  Y++     G  I   AL +  +       +                
Sbjct: 86  RVQLAAG---KRIDYVSGWDCHGLPIELKALELQAQRDAGKLQSSG-------------- 128

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                 ++  +   N          +  + + +++ ++   +   +  D   S     + 
Sbjct: 129 ------NEKGNANENLGAAAIRNAARQLAERTVVEQMKG-FRQWAVMADWNNSWKTMDKN 181

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKS 296
                 D+   +  +G +     P   S
Sbjct: 182 FEYKQLDVFLKMVEKGLINRRFKPVYWS 209


>gi|169632586|ref|YP_001706322.1| valyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169151378|emb|CAP00102.1| valyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 959

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 56/208 (26%), Gaps = 36/208 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGK 78

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
               +   + AG     +                         G+    +G+E       
Sbjct: 79  NTLWQPGTDHAGIATQMVVERQL-----------------SLQGITRHDLGRE------- 114

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 115 ---KFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L   G +Y G          Q    D +
Sbjct: 166 LHEDGLIYRGKRLVNWDPKLQTALSDLE 193


>gi|167464567|ref|ZP_02329656.1| isoleucyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 922

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 107/353 (30%), Gaps = 65/353 (18%)

Query: 208 HVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFIS 261
                  DK+  ++L    E KW P   +  +  M+   R D      +A  +   IF  
Sbjct: 409 EQWFASVDKFREKMLEEIKEVKWTPSWGEVRLHNMIAD-RGDWCISRQRAWGVPIPIFYC 467

Query: 262 EDDFHRG-DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQL 309
               H   + +  + + D  A++G            + EG + P         + D   +
Sbjct: 468 RSCNHHLVNEATTQHVADIFAKEGSNAWFIKGAKELLPEGTVCPNCGHEEFTKEKDIMDV 527

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLE 368
            F S               GS        A    + E  +   +Y+ GSD   G+     
Sbjct: 528 WFDS---------------GSSH-----AAVLGQRNELSWPADLYLEGSDQYRGWFNSSL 567

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               AV E+     VL         DG   KMSK  G+ I    V +++G+D +R  +  
Sbjct: 568 ITGVAVKEEAPYKGVLSHGF---TLDGEGRKMSKSIGNTIDPNQVCEKLGADILRLWVAS 624

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               +       K+  Q  E         Y + R+  R         +       V   E
Sbjct: 625 VDYQQDHRVS-DKILNQITE--------VYRKIRNTLRFLLGNLSYFNPVTDKVPVEQME 675

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF-----HGHW 536
                + ++L   +      +  A  A E + +    Y     F        +
Sbjct: 676 ELDRYAYIRLNRMI----EKVVRAYDAYEFHLV----YQTIHHFCAVEMSSFY 720


>gi|170114875|ref|XP_001888633.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636328|gb|EDR00624.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 380

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 42/294 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTGP+H+G  R A+     A       +M     + TR Y        +  +  ++ 
Sbjct: 14  APSPTGPLHLGGLRMALYNFLFARRHGGKWIMRVEDTDATR-YVPGS----VEGIRHALN 68

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +  Y    D P       Y +    +L   Y+++LL+            +     +
Sbjct: 69  WAGLEYDYGPGKDGP----HAPYFQSERLDLYRSYATKLLHSGHAYRC-----FCSMDQL 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R+ L           S   + +       + +    R G   + I+    S +    
Sbjct: 120 TETREKLARSG-------SNASYDKRCLHLTDEEVARKVRAGE--KSIVRLNVSDSNLPQ 170

Query: 303 DMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
                 L+F   +        D  LLKSD   TY    LA     +E G  +++   G +
Sbjct: 171 RPRGADLVFGPLKDAHASLATDPVLLKSDLFPTYH---LASVVDDHEMGITHVLR--GEE 225

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
               +     + AA+  +  +   +      +  +    KMSKR GD   + ++
Sbjct: 226 WLPSLPLHLDLYAALKLEPPKFAHM-----PILLNPDRTKMSKRNGDVQVVDYI 274


>gi|163844389|ref|YP_001622044.1| isoleucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163675112|gb|ABY39222.1| isoleucyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 972

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 62/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   + T 
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVTT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|148377486|ref|YP_001256362.1| isoleucyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|254782420|sp|A5IY09|SYI_MYCAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148291532|emb|CAL58918.1| Isoleucyl tRNA synthetase (Isoleucine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 892

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 88/238 (36%), Gaps = 25/238 (10%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           +++ ++   +   T          L    FRS     ++D   +  D   T  A ++   
Sbjct: 483 IFDYVIDLVEKYGTDIWWEKEADELLPEEFRSNGYTKEMDIMDVWFDSGTTSLAVEI--- 539

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             K +  +D  +Y+ GSD   G+       + A + K     ++    V    D    KM
Sbjct: 540 DEKLKPPYD--LYLEGSDQYRGWFNSSLINSVAYTHKSPYKQIVSHGFV---LDSKGEKM 594

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK-----ENPVFYV- 454
           SK  G+ +    V+ + G+D +R  +   + +  ++     + + S+      N + ++ 
Sbjct: 595 SKSKGNVVDPLKVIKKYGADILRLWVANAEYTNDVNISDEIINQNSEIYRKIRNTIKFLL 654

Query: 455 --QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                Y    S+ R     +   + +     V     E++ S +  I  + +Y  V+E
Sbjct: 655 GNLNGYEYDESVKRTGVHQYIYNELESIKEKVYKAYDEYNFSSV--IKTINKY--VVE 708


>gi|81300729|ref|YP_400937.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123556548|sp|Q31LW9|SYL_SYNE7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81169610|gb|ABB57950.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 865

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 22/70 (31%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         +             K     +   P+G +H+GH R   + D +A
Sbjct: 20  RYDPQAIETKWQQSWAAAQLDRTPEADDRPKFYALSMFPYPSGNLHMGHVRNYTITDAIA 79

Query: 152 SLMAFSGYEV 161
            +    G+ V
Sbjct: 80  RVKRRQGFRV 89


>gi|56752183|ref|YP_172884.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|60390662|sp|Q5N006|SYL_SYNP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56687142|dbj|BAD80364.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 865

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 22/70 (31%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         +             K     +   P+G +H+GH R   + D +A
Sbjct: 20  RYDPQAIETKWQQSWAAAQLDRTPEADDRPKFYALSMFPYPSGNLHMGHVRNYTITDAIA 79

Query: 152 SLMAFSGYEV 161
            +    G+ V
Sbjct: 80  RVKRRQGFRV 89


>gi|302672159|ref|YP_003832119.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
 gi|302396632|gb|ADL35537.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
          Length = 679

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 66/414 (15%), Positives = 130/414 (31%), Gaps = 71/414 (17%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           +    K  I    A  +G  H+G+    V+ D +A      G++V  +   ++ G +I T
Sbjct: 1   MQNKGKYYITTAIAYTSGKPHIGNSYEIVLADAIARYKRRDGFDVHFQTGSDEHGQKIET 60

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            A+       +   +  SD  +G      L ++     D++     +   ++   I K +
Sbjct: 61  RAIEAGCASPKEFVDQVSDTIKG------LWNLMDTSYDRFIRTTDDDHVKQVQKIFKRF 114

Query: 237 SVQAMMKIIRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             Q    I +   K +   + + F +E     G              +     G + P +
Sbjct: 115 YDQG--DIYKGSYKGMYCTECEAFYTESQLKDG--------------KCPECGGPVHPAE 158

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYERG--- 348
            +            L        +  +P+ + +     F      DL   +  ++ G   
Sbjct: 159 EEAYFFKMSKYADKLIDYINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPV 218

Query: 349 -FD--NMIYVM-------------GSDHS---GYVKRLEAVAAAVSEK--------KAQI 381
            FD  +++YV               ++      Y K   A    + +             
Sbjct: 219 DFDDKHVVYVWLDALSNYITGIGYDAEGHSSEEYKKWWPADLHLIGKDIIRFHTIYWPIF 278

Query: 382 NVLLCELVRLYRDGMP------IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SEL 434
            + L E +     G P       KMSK  G+ I    +V   G D VR+ +L        
Sbjct: 279 LMALGEPLPKQIFGHPWLLQGGEKMSKSKGNVIYADDLVSLFGVDPVRYFVLHEMPFEND 338

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFP 481
               +  + E+   +    +     R  ++  +        K +  D+D DL  
Sbjct: 339 GVITWELLVERFNSDLANTLGNLVNRTIAMSNKYLGGVVADKGVTEDVDADLKA 392


>gi|325678885|ref|ZP_08158483.1| valine--tRNA ligase [Ruminococcus albus 8]
 gi|324109389|gb|EGC03607.1| valine--tRNA ligase [Ruminococcus albus 8]
          Length = 897

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 48/198 (24%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  + K           +      K    +I     N TG +H+GH     + D L 
Sbjct: 7   TYDPREVEKRTYEAWEKNGCFRGVADPKKKPYSIAMPPPNVTGQLHMGHAVDNTMQDILT 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY        + A   I T A  V    Q+ L   D                  
Sbjct: 67  RFKRMQGYAALWIPGTDHA--AIATEAKIVEAMRQEGLTKAD-------LGREKFMERAW 117

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +K+                           I + L+ L    D              
Sbjct: 118 AWKEKFGGR------------------------IVEQLRTLGTSCDWEREHFTMDEQCSK 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            + ++   L  +G +Y G
Sbjct: 154 AVLEVFVKLYEEGLIYRG 171


>gi|260466804|ref|ZP_05812989.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029416|gb|EEW30707.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +     +    N   +     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  KWQKAWAAKKLFEAHNDDPRPKYYVLEMF-PYPSGRIHIGHTRNYTMGDVVARYKRAKGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|164687829|ref|ZP_02211857.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
 gi|164603104|gb|EDQ96569.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
          Length = 806

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 98/297 (32%), Gaps = 50/297 (16%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N         +     + +  +       K     +E     P+G +H+GH R   +GD 
Sbjct: 5   NFK-DVEAKWQNKWEEI-NQYKTDTRDTSKPLYYTLEMF-PYPSGKIHMGHVRNYSIGDV 61

Query: 150 LASLMAFSGYEVTR---------------------------EYYINDAGAQINTLALSVF 182
           +A      GY V                             E  I+D   Q+  L LS  
Sbjct: 62  VARFKKMEGYNVLHPMGWDSFGLPAENAAIKHGIHPAKWTYEN-IDDMKNQLKLLGLSYD 120

Query: 183 WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           W  + A  N D      YY     ++LK +   LA K     +N+       +  +  V 
Sbjct: 121 WERELATSNPD------YYKFTQEIFLKFLEAGLAYK-KKSFVNWCPSCETVLANEQVVG 173

Query: 240 AMMK-----IIRDDLKALNIQHDIFISE--DDFHR--GDPSPIRDIIDNLARQGYVYEGI 290
              +     +++ +L+    +   F  E  +D  +  G P  ++ +  N   + +  E +
Sbjct: 174 GQCERCDAVVVKKELEQWYFKTTEFAEELLNDLDKLEGWPEKVKTMQRNWIGKSHGAEIV 233

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
                S         R   ++ +T +    + PL+K   + T + AD+  F  K   
Sbjct: 234 FDIDGSDDQMIVYTTRPDTVYGTTFMALAPENPLVKELVAGTEYEADVDKFVQKMHT 290


>gi|163782779|ref|ZP_02177775.1| leucyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881900|gb|EDP75408.1| leucyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 605

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
              V       R    KG K  +  +   P+G +H+GH R   +GD +A  +   G  +
Sbjct: 13  WQRVWEERGVFRAEEFKGDKFYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLKMKGKNL 71


>gi|78222945|ref|YP_384692.1| glutamyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|115305767|sp|Q39UV7|SYE_GEOMG RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78194200|gb|ABB31967.1| glutamyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 465

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 94/293 (32%), Gaps = 56/293 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+    L+       ++     +V R         Q  ++   + 
Sbjct: 9   APSPTGYLHVGGARTALFNWLLSRKEKGTFILRIEDTDVARS-------TQ-ESVDAILQ 60

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
                 L  ++    +     VY + V K +A+        +   + L   ++ +++   
Sbjct: 61  GMAWLGLGWDEGPFYQSERFPVYKEFVEKLVAE--GKAYRCYCTSEALEAKRELAMKEGR 118

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K   D                          R+ ++    + YV       P    T   
Sbjct: 119 KPKYD-----------------------GTCRNGVEEPGDKPYVIR--FKAPHEGVTVFD 153

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ + ++ F +  +    D  + +SDG+ TY    +         G   +I   G DH  
Sbjct: 154 DLIKGRIAFNNDELD---DLIIQRSDGTPTYNFVVV---IDDATMGITTVIR--GDDHIN 205

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
              R   +  A+     +        V +       ++SKR G    +  R +
Sbjct: 206 NTPRQILLYEALGYPVPRFAH-----VPMILGADKTRLSKRHGATSVMAYRDM 253


>gi|84494287|ref|ZP_00993406.1| valyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383780|gb|EAP99660.1| valyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 895

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 27/190 (14%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   V+ E  +D+VR+     +      +D  ++K   +      
Sbjct: 598 DPDRKKMSKSKGNVVTPEDVLKEHSADAVRYWAASGRLGADAAYDVGQMKVGRRL--AIK 655

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           V  A     S       I    + +          +  D +       LA    V+E AT
Sbjct: 656 VLNASKFALSFGEAEAGIGLSGEVEGAGSLADQVTNPLDRA------LLAGLREVVEKAT 709

Query: 514 IAQEPYKLAFYLY--DLASVFHGHWSHGRENPRLRFVQA----NNRKLTMMRLQLVHAVA 567
              E      Y    ++   F   W+   +   L   +A     + +    R        
Sbjct: 710 AGFE-SW--DYTRSLEVTETF--FWTFCDDYLELVKDRAYGSQGDAEAASAR-------- 756

Query: 568 SIINSGLNII 577
           + +   L+++
Sbjct: 757 ATLRIALDVL 766


>gi|332992538|gb|AEF02593.1| methionyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 675

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 64/206 (31%), Gaps = 25/206 (12%)

Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYE---GILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           + E +    D     D++    R G + E     L    ++  Q+ D+ R    F   + 
Sbjct: 184 LKESEHFFFDLPKFEDMLKGWIRSGALQEEMANKLQEWFTEGLQQWDISRDAPYFGFEIP 243

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS---GYV--------- 364
           G       +  D    Y A+    F  +    FD      GSD      +          
Sbjct: 244 GAPNKFFYVWVDAPVGYMAS-FKNFCDQNNLEFD---DFWGSDSEAELYHFIGKDITYFH 299

Query: 365 -KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                A+      +K    V +   V +       KMSK  G FI  R  +D +  + +R
Sbjct: 300 CLFWPAMLEGAGYRKPT-GVNIHGFVTV----NGAKMSKSRGTFIKGRTYLDHLNPEYLR 354

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKEN 449
           +    +    + D D        K N
Sbjct: 355 YYFASKLGDSVTDIDLNFTDFAQKVN 380


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 17/184 (9%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A    K    +   +Y+ GSD   G+       A A   +     VL    V    DG  
Sbjct: 545 AAVLRKRGLPWPADMYLEGSDQHRGWFHSSLLTAVATRGQAPYKTVLTHGFV---LDGKG 601

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +    ++ + G+D +R  +      + L      +   ++         +
Sbjct: 602 RKMSKSMGNVVAPDAIIKKYGADILRLWVAAEDYRDDLRISDEIINRLAE---------S 652

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           Y R R+  R       D +  L    +     EFD     L  + A + + + +A    E
Sbjct: 653 YRRIRNTARYMLGNLYDFNP-LTDAILYGDMLEFDRY--ALARYHA-FEKRVLDAYENYE 708

Query: 518 PYKL 521
            + +
Sbjct: 709 FHVI 712


>gi|220911630|ref|YP_002486939.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254765174|sp|B8HCR7|SYC_ARTCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219858508|gb|ACL38850.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 488

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 103/318 (32%), Gaps = 31/318 (9%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +  A   G  HVGH R A+  D L   +   G  VT    + D   +I  LA S    + 
Sbjct: 28  YCGATVQGMPHVGHIRSAIAFDQLTRWLTHRGLRVTVVRNVTDIDDKI--LAKS-EASFA 84

Query: 187 QALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                   ++P E ++   Y     +E    Y +  ++ P  +         + A+++ +
Sbjct: 85  SGFQPEPGEIPGEEWWALAYRYE--QEFLKAYDALGVSRPTYEPRATGHIPEMHALIQQL 142

Query: 246 RDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            D      AL+   D++     + +            L RQ             +   K 
Sbjct: 143 IDRGHAYPALDDSGDVYFDVRSWSKYGA---------LTRQNIDDMQAAADADPRG--KR 191

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD- 359
           D     L  + +  G+            G   +     A         FD  I+  G D 
Sbjct: 192 DPRDFALW-KGSKEGEPATASWASPWGAGRPGWHLECSAMVTKYLGTEFD--IHGGGLDL 248

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              + +   A + A     A   +       +  +G   KMSK  G+ I+   +++    
Sbjct: 249 RFPHHENEMAQSQAAGHPFANFWMHNG---MVTYEGE--KMSKSIGNTISPAEMLELASP 303

Query: 420 DSVRFMMLWRKNSELLDF 437
             VR+ +       +LD+
Sbjct: 304 RVVRYYLGQAHYRSILDY 321


>gi|218887851|ref|YP_002437172.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758805|gb|ACL09704.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 883

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 56/191 (29%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                +       +  +L   G   +I     N TG +H+GH     + D L        
Sbjct: 16  ESRWRAHWEGNKTFTPDLDAPGEPFSIVIPPPNVTGALHMGHALNLTIQDILCR------ 69

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                    + ++ L+   +D        V  + +      K  
Sbjct: 70  ---------------------HARQKGKKVLWVPGTDHAGIATQNVVERGLA-----KEG 103

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK++  V ++  +   +I+   ++A+    D          G    +R +  
Sbjct: 104 KGRHDLGREKFIERVWEWREEYGTRILNQ-IRAMGASVDWTRERFTMDEGLSRAVRQVFV 162

Query: 279 NLARQGYVYEG 289
            L   G +Y+G
Sbjct: 163 KLYDDGLIYKG 173


>gi|169797225|ref|YP_001715018.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156869|ref|YP_001845208.1| leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155981|ref|YP_002318026.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260556107|ref|ZP_05828326.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301346500|ref|ZP_07227241.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301509990|ref|ZP_07235227.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594195|ref|ZP_07239203.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332851270|ref|ZP_08433343.1| leucine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332866139|ref|ZP_08436854.1| leucine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332874055|ref|ZP_08441990.1| leucine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226731222|sp|B7I5I5|SYL_ACIB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238688028|sp|B0V5H2|SYL_ACIBY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690966|sp|B2HTC4|SYL_ACIBC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169150152|emb|CAM88046.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208463|gb|ACC55861.1| Leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213055141|gb|ACJ40043.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260410162|gb|EEX03461.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322506763|gb|ADX02217.1| leuS [Acinetobacter baumannii 1656-2]
 gi|323516634|gb|ADX91015.1| leucyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332730150|gb|EGJ61477.1| leucine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734780|gb|EGJ65874.1| leucine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332737796|gb|EGJ68688.1| leucine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|71083063|ref|YP_265782.1| leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062176|gb|AAZ21179.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 844

 Score = 42.2 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 86/291 (29%), Gaps = 45/291 (15%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N     +   K       + +   +    K     +E     P+G +H+GH R   +GD 
Sbjct: 5   NF---KTVEEKWQKFWHKNKVFSSKLDKTKKKFYCLEMF-PYPSGKIHMGHVRNYTIGDV 60

Query: 150 LASLMAFSGYE--------------------------VTREYYINDAGAQINTLALSVFW 183
           LA      GY                              E  I    +Q+  L LS+ W
Sbjct: 61  LARYKTLQGYNVLHPMGWDSFGMPAENAARQNNLDPKTWTESNIKTMRSQLKKLGLSIDW 120

Query: 184 RYQ-----QALYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             +     +  Y +  +     Y  G+  +       D     +L   +       +  +
Sbjct: 121 DKEISTCSEDYYKHQQEFFLDLYDKGLVYRKENYVNWDPVDETVLANEQVVDGKGWRSGA 180

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                K+ +          D+    D      P+ ++ +  N   + +  E        K
Sbjct: 181 TVERKKLNQWFFNISKFSEDLLQGLDALEN-WPNKVKVMQKNWIGKSFGCEVEFKIESEK 239

Query: 298 TTQ--KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             +  KC   R   LF  + +   VD PL K      Y+  D  + K + E
Sbjct: 240 PIESIKCYTTRPDTLFGFSFLALSVDHPLAK------YYEEDKEFQKFREE 284


>gi|327438249|dbj|BAK14614.1| glutamyl- and glutaminyl-tRNA synthetase [Solibacillus silvestris
           StLB046]
          Length = 486

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 102/292 (34%), Gaps = 47/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      ++ R        +Q++ L  
Sbjct: 10  APSPTGFLHIGGARTALFNYLYAKHHNGTFVVRIEDT---DIER-NVEGGEASQLDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               R+     +   D+   Y P  Y +    ++  +++ ++L           K +   
Sbjct: 64  ----RWLGITPDESIDIGGPYAP--YRQMERLDIYKEHAEKMLENG-----QAYKCFCTS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R+  KA  +    +  +            + +      G  +   +  P++ T 
Sbjct: 113 EELEASREKQKAQGVAAPAYDGKC------RHLTAEEVAEKEAAGIPHTIRMRVPENVTY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
           Q  D+ R ++ F S  +GD     L+K++G  TY       +    +  F  + +V  G 
Sbjct: 167 QFTDLVRGEVSFESKDIGDW---VLVKANGIPTYN------YAVVLDDHFMEITHVFRGE 217

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +H     +   +  A   +  Q   +      L  +    K+SKR    I  
Sbjct: 218 EHLSNTPKQMMIFDAFGWEYPQYGHM-----TLIVNEERKKLSKRDESIIQF 264


>gi|322384104|ref|ZP_08057822.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151184|gb|EFX44493.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 896

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 107/353 (30%), Gaps = 65/353 (18%)

Query: 208 HVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFIS 261
                  DK+  ++L    E KW P   +  +  M+   R D      +A  +   IF  
Sbjct: 383 EQWFASVDKFREKMLEEIKEVKWTPSWGEVRLHNMIAD-RGDWCISRQRAWGVPIPIFYC 441

Query: 262 EDDFHRG-DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQL 309
               H   + +  + + D  A++G            + EG + P         + D   +
Sbjct: 442 RSCNHHLVNEATTQHVADIFAKEGSNAWFIKGAKELLPEGTVCPNCGHEEFTKEKDIMDV 501

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLE 368
            F S               GS        A    + E  +   +Y+ GSD   G+     
Sbjct: 502 WFDS---------------GSSH-----AAVLGQRNELSWPADLYLEGSDQYRGWFNSSL 541

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
               AV E+     VL         DG   KMSK  G+ I    V +++G+D +R  +  
Sbjct: 542 ITGVAVKEEAPYKGVLSHGF---TLDGEGRKMSKSIGNTIDPNQVCEKLGADILRLWVAS 598

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488
               +       K+  Q  E         Y + R+  R         +       V   E
Sbjct: 599 VDYQQDHRVS-DKILNQITE--------VYRKIRNTLRFLLGNLSYFNPVTDKVPVEQME 649

Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF-----HGHW 536
                + ++L   +      +  A  A E + +    Y     F        +
Sbjct: 650 ELDRYAYIRLNRMI----EKVVRAYDAYEFHLV----YQTIHHFCAVEMSSFY 694


>gi|255583454|ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
 gi|223527811|gb|EEF29910.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
          Length = 577

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 94/287 (32%), Gaps = 48/287 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG  R A+     A       ++     ++ R              +    
Sbjct: 67  APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERS----------TKESEDAL 116

Query: 183 WRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            R    L  +  + P  G   G Y +     L  +Y+ +LLN     +     +  ++ M
Sbjct: 117 LRDLTWLGLDWDEGPHVGGDYGPYRQSERNSLYKQYADKLLN-SAHVYRCFCSNEELEKM 175

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +I +  LK L            +     +   + +     +   Y      PK  + + 
Sbjct: 176 KEIAK--LKQLPPV---------YSGKWATATDEEVQEELAKATPYTYRFRVPKEGSLKI 224

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGS 358
            D+ R ++ +    +GD     +++S+G   Y      D A           ++I     
Sbjct: 225 NDLIRGEVSWNLDTLGDF---VIMRSNGQPVYNFCVTVDDAT------MAISHVIR--AE 273

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           +H     R   +  A+        + L   V L       K+SKR G
Sbjct: 274 EHLPNTLRQALIYKALGFP-----MPLFAHVSLILAPDRSKLSKRHG 315


>gi|167037935|ref|YP_001665513.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040834|ref|YP_001663819.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914869|ref|ZP_07132185.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723897|ref|YP_003903648.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320116350|ref|YP_004186509.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855074|gb|ABY93483.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856769|gb|ABY95177.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889804|gb|EFK84950.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580958|gb|ADN54357.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319929441|gb|ADV80126.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 879

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 88/249 (35%), Gaps = 42/249 (16%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      +  K+     +L     L 
Sbjct: 470 TEDLQYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFM--KEVPFKHVLIHG--LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V++E G+D++RF ++        D  F + K +   N  F
Sbjct: 519 RDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNAPGN-DMRFSQDKVELSRN--F 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A    +         D D +L+   +   +             L  Y  +++  
Sbjct: 576 ANKLWNASRYVLLN-----LTDNDTNLYTDGLTIADKWI----------LTRYNNIVKEV 620

Query: 513 TIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           T   E ++L   A  LYD   S F   +      P L       +K+T   L        
Sbjct: 621 TENLEKFELGIAATKLYDFVWSEFCDWY-IELSKPVLYSDNLEAKKVTKSVL------RY 673

Query: 569 IINSGLNII 577
           ++++ L ++
Sbjct: 674 VLDNTLRLL 682


>gi|327399319|ref|YP_004340188.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181948|gb|AEA34129.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 814

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        G    ++   K     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 12  KWQKIWEEKGAFKAKDFDKKPKFYQLEMF-PYPSGRIHMGHVRNYSIGDAIARYKFAQGY 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 469

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 111/359 (30%), Gaps = 33/359 (9%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +  DT+     + GYEV    Y+++     + +        +      D+ 
Sbjct: 35  IHIGNARPMIFFDTVRRYFEYRGYEV---NYVSNFTDVDDKII------NKAIEEGVDAA 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +    Y     K +        +   L   E + +  +    +++    +  D       
Sbjct: 86  VISQRYINECKKDMAAMNVLPATKNPLATQEIEGMEDMIGKLIKSGHAYVAKD----GTV 141

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           +    S  D+ +     I ++           E            K   + +        
Sbjct: 142 YFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDSNDFVLWKPKKEGEPYW----- 196

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                + P  K    +    + ++      ++     I + G          E   A  S
Sbjct: 197 -----ESPWSKGRPGWHIECSVMS------KKYLGEQIDIHGGGEDLIFPHHENEIAQ-S 244

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           E  +  +     +   + +    KMSK AG+F T+R + ++     +RF ML       L
Sbjct: 245 ESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHYRSPL 304

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRS-IFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493
           +F    +  ++ +N +  +       ++ I R       D +        + ++   D 
Sbjct: 305 NFSAELM--EAAKNSLERILTGMDNIKTVIARNNTAPITDAELSNLEIAKVLKDKFADA 361


>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 921

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 109/345 (31%), Gaps = 68/345 (19%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D     L    + KW+P   +  +  M++  R D      +A  +   +F +E++   
Sbjct: 415 IKDFREDLLKAVEKTKWVPTWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYAENEEPI 473

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                I  + +     G            + EG             + D   + F S   
Sbjct: 474 ITDETIEHVSNLFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFDSGS- 532

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
                + +L+               +    R  D  +Y+ GSD   G+     + + AV+
Sbjct: 533 ---SHQAVLEE--------------REDLHRPAD--LYLEGSDQYRGWFNSSLSTSVAVT 573

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            +     VL         DG   KMSK  G+ +    V+ ++G+D +R  +        +
Sbjct: 574 GEAPYKGVLSHGF---ALDGEGRKMSKSLGNVVIPEKVMKQLGADILRLWVAS------V 624

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           D+       +  +N +  V   Y + R+ FR       D +    P        +    +
Sbjct: 625 DYQAD---VRVSDNILKQVAEVYRKIRNTFRFLLGNLADFN----PTTDAVAVEDLREVD 677

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540
             ++V L +    ++ +  + E              F   +    
Sbjct: 678 RYMLVKLNKLIDKVKKSYDSYE--------------FSSIYHAVH 708


>gi|296086574|emb|CBI32209.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISE-------DDFHRGDPSPIRDI 276
           +W   ++  + +A+  + R +L    +     ++ ++S             G   P+  I
Sbjct: 159 QWFVTMEPLAEKALQAVERGELTIMPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYI 218

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRK--------QLLFRSTMVGDDVDRPLLKSD 328
           +     + Y+          K  +K   D +           F S +             
Sbjct: 219 VGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPF---------- 268

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387
              T    D++    K        I V+ + H   +      V   +      +      
Sbjct: 269 --STLGWPDVSTQDFKKFYP----ITVLETGHDILFFWVARMVMMGIEF-TGAVPFSYVY 321

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
           L  L RD    KMSK  G+ I     + E G+D++RF +      + L+    ++   
Sbjct: 322 LHGLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRFTLALGTAGQDLNLSTERLTSN 379


>gi|220916675|ref|YP_002491979.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954529|gb|ACL64913.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 1051

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 53/189 (28%), Gaps = 32/189 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +        G  +G          +I     N TG +H+GH   A + D L      SG
Sbjct: 26  ARWYPFWQERGYFHGDEHDRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSG 85

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +        + AG     +                               V KEL     
Sbjct: 86  FNTLWLPGTDHAGIATQMI-------------------------------VEKELKKTEK 114

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L  V  +  Q   + I +  KAL    D          G    +R++  
Sbjct: 115 KSRHDLGREAFLERVWAWKEQYGSR-IGEQHKALGASLDWQRERFTMDEGLSRAVREVFV 173

Query: 279 NLARQGYVY 287
            L  +G +Y
Sbjct: 174 RLHEEGLIY 182


>gi|83855265|ref|ZP_00948795.1| leucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83843108|gb|EAP82275.1| leucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 848

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 1/98 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  ++   + +        K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  ARWQAAWEKNDVFQAVRNADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKIATG 69

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           + V      +  G      A+++    +   Y N +D+
Sbjct: 70  HNVLHPMGWDAFGMPAENAAMAIGGHPKDWTYGNIADM 107


>gi|315185987|gb|EFU19751.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 809

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +           L+ + + L  DG   KMSK  G+
Sbjct: 538 LYVGGAEHAVLHLLYARFWHKVLYDLGLVNTDEPFMRLVNQGMILGEDGE--KMSKSRGN 595

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V+E G+DS+R
Sbjct: 596 VVNPDDIVEEYGADSLR 612


>gi|300176388|emb|CBK23699.2| unnamed protein product [Blastocystis hominis]
          Length = 1091

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 82/296 (27%), Gaps = 45/296 (15%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              + +E  + L  +   V +     N TG +H+GH     + D +      SG E    
Sbjct: 132 FCKASVERAKQLPPEKKFVMV-IPPPNVTGSLHLGHALTNSIEDAIVRWKRMSGCETLWV 190

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
             ++ AG     +                               V K+L         + 
Sbjct: 191 PGVDHAGIATQVV-------------------------------VEKQLMKDEGKTRHDL 219

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
             E ++  V ++  +     I   L+ L    D             + +++    L  +G
Sbjct: 220 GREAFVEKVWEWK-RNYANSITHQLRRLGTSVDWSREAFTMDPNLTAAVKEAFVRLFEKG 278

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--GSYTYFAADLAYFK 342
            +Y         +    C   R  L        D   R L K    G   Y    +  F 
Sbjct: 279 KIYRSR------RLVNWCCQLRTALSDIEVEYIDLEGRTLRKVPGHGDKLYEFGCITKFA 332

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
              E   + +  V+ +        L   A AV     +   L  + V    +G  I
Sbjct: 333 YPVENSDEKI--VVATTRLE--TMLGDTAVAVHPDDPRYKHLHGKYVIHPINGRRI 384


>gi|298709584|emb|CBJ31410.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1193

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 36/232 (15%)

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-------IDN 279
           + WL   KD++V                   +++SED         I ++       + +
Sbjct: 467 QNWLEGAKDWAVSRNRFW--------GTPMPMWVSEDGEEMVAVGSIAELKELSGVEVTD 518

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           L R+  V    +P  + K   K   +     F S  +                Y   +  
Sbjct: 519 LHRES-VDHITIPSKQGKGDLKRVEEVFDCWFESGSMPY----------AQLHYPFEN-- 565

Query: 340 YFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
             K K+E+ F       G D   G+   L  + AA+   K     L+   + L  DG   
Sbjct: 566 --KDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAAL-FDKPAFKNLIVNGLVLASDGK-- 620

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKE 448
           KMSKR  ++     V+D  G+D++R  ++      +E L F    V+   +E
Sbjct: 621 KMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVRE 672


>gi|290473520|ref|YP_003466390.1| valine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289172823|emb|CBJ79594.1| valine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 965

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L +       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 18  TYNPTEIEQPLYNHWEKNGYFKPNGDTSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMV 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++   I    ++ L    D          G   
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGNITNQ-MRRLGNSVDWERERFTMDEGLSK 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G          +    D +
Sbjct: 166 AVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|265763886|ref|ZP_06092454.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263256494|gb|EEZ27840.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 1141

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 649 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + GSD +R+ M+   +  + L FD   ++E + K     Y  Y++         A     
Sbjct: 706 QYGSDPLRWYMITNSSPWDNLKFDVDGIEEVRRKFFGTLYNTYSFFALY-----ANVDGF 760

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +      P N  P   E D   L ++  L +    ++      EP
Sbjct: 761 EYKEADLPMNERP---EIDRWILSVLNTLVK---EVDTCYNEYEP 799


>gi|301117980|ref|XP_002906718.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108067|gb|EEY66119.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 688

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 132/421 (31%), Gaps = 71/421 (16%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA-FSGYEVTREYYINDAGAQIN 175
             +G +V             H+GH R     D +  ++  + G EV     I D   +I 
Sbjct: 50  PMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGLEVELVMNITDIDDKII 109

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             A    W       N   +LP+        K    +L  +++S+       +    +  
Sbjct: 110 LRASETGWLEA----NPGKELPKD-------KDEKAKLVMEWASQQSAEDNMRRTRELSK 158

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE------- 288
           +  ++ +    +D+ ALNI+    I+    +  +   + + ++ + + G+ YE       
Sbjct: 159 FWEKSFL----EDMAALNIKTPTVITRVSEYVPE---VVEFVEGIIKNGFAYESNGSVYF 211

Query: 289 -------------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-------- 327
                        G L P     ++        L    +   +  D  L K         
Sbjct: 212 DTAAFGQSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFW 271

Query: 328 -----DGSYTYFAADLAYFKCKYERGFDNMIYV----MGSD---HSGYVKRLEAVAAAVS 375
                +G   +     A      +      I V    +      H   + + EA      
Sbjct: 272 PSPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAY----- 326

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
              +Q          L  +G  +KMSK   +F+ ++  + +     +RF+ L  K +  +
Sbjct: 327 FDFSQWVNYFVHTGHLNIEG--LKMSKSLKNFVKIQEALMDNSPRQLRFLFLLHKYNVPM 384

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           D++   + E    +  F   +A  + R      +++  +      P       +  D  E
Sbjct: 385 DYNDNSMDEAVGVDRFFTEFFANVKAR-----LRELGVEKTQKWTPVEKALHGALLDCKE 439

Query: 496 L 496
            
Sbjct: 440 K 440


>gi|255082165|ref|XP_002508301.1| predicted protein [Micromonas sp. RCC299]
 gi|226523577|gb|ACO69559.1| predicted protein [Micromonas sp. RCC299]
          Length = 941

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 19/131 (14%)

Query: 335 AADLAYF--KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           AADLA F      E G D +++         V R+  ++  ++ K     V L  LV   
Sbjct: 509 AADLAKFFPTQVMETGHD-ILFFW-------VARMVMMSYGMTGKLPFHTVFLHGLV--- 557

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE--- 448
           RD    KMSK  G+ +   +V+DE G D++RF +     + + L+ +  ++         
Sbjct: 558 RDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQDLNLNMDRLASNRNFTNK 617

Query: 449 --NPVFYVQYA 457
             N   +V Y+
Sbjct: 618 IWNSGKFVLYS 628


>gi|215484666|ref|YP_002326901.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|226731221|sp|B7H051|SYL_ACIB3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|213987319|gb|ACJ57618.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 5   HIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 64

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 65  DVISRFYRLKG 75


>gi|188994381|ref|YP_001928633.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594061|dbj|BAG33036.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 1137

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 12/112 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +S   +   V+   LV    D    KMSKR G+ +     + 
Sbjct: 648 GVDQTRGWFFTLHAIATMISGTSSFKVVVSNGLV---LDKKGNKMSKRLGNAVDPFETIK 704

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA  
Sbjct: 705 KYGSDPLRWYMITNSSPWDNLKFDTDGVEEVRRKFFGTLYNTYQFFALYANL 756


>gi|170049395|ref|XP_001855875.1| valyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871251|gb|EDS34634.1| valyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1038

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 52/200 (26%), Gaps = 36/200 (18%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           SP Y+     S          EYGR       +  +     N TG +H+GH     + D 
Sbjct: 88  SPQYVEAAWYSWWEKEGFFKPEYGRKENNPRGQFVMVIPPPNVTGSLHLGHALTNAIEDA 147

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +       G         + AG     +     WR Q+                      
Sbjct: 148 ITRWHRMKGRTALWVPGCDHAGIATQVVVEKKLWREQKL--------------------- 186

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                        +   EK++  +  +  +   +I    LK L    D   +        
Sbjct: 187 ----------NRHDLGREKFIEKIWQWRNEKGDRIYHQ-LKKLGSSFDWDRACFTMDPKL 235

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              + +    +   G +Y  
Sbjct: 236 CRAVTEAFVRMHETGLIYRS 255


>gi|163734025|ref|ZP_02141466.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161392561|gb|EDQ16889.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 1038

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV+ +K    V +  LV   RD    KMSK  G+
Sbjct: 631 TGFD-IIFFW-------VARMMMMQYAVTGQKPFSTVYVHALV---RDEKGKKMSKSLGN 679

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    ++DE G+D+VRF +
Sbjct: 680 VIDPLDMIDEFGADAVRFTL 699


>gi|154174333|ref|YP_001408523.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|189082988|sp|A7GZ81|SYL_CAMC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112803061|gb|EAU00405.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 821

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +G    ++      K  +      P+G +H+GH R   +GD LA     + +
Sbjct: 15  KWQEIWHKNGEFEPKDDYTLPKKYILSMF-PYPSGRIHMGHVRNYSIGDALARYYRKNCF 73

Query: 160 EV 161
            V
Sbjct: 74  NV 75


>gi|42569504|ref|NP_565717.2| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
           ligase/ nucleotide binding [Arabidopsis thaliana]
 gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 563

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 113/336 (33%), Gaps = 50/336 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D L   +   GYEV    Y+         +   +  R ++   +  S  
Sbjct: 100 HIGHARVYVTFDVLLRYLKHLGYEV---SYV----RNFTDVDDKIIARAKELEEDPIS-- 150

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLK---A 251
                       + +   ++++ ++      +    P V D+  Q ++ +I+  L    A
Sbjct: 151 ------------LSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQ-IIDLIKQILDNGYA 197

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  DI+ S D F        R + DN A +    +     P      K   + +    
Sbjct: 198 YKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPFW- 256

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                    + P  +    +    + +  AY    ++     M  ++   H   + +  A
Sbjct: 257 ---------ESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGM-DLVFPHHENEIAQSCA 306

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                    + I+  +             KMSK  G+F T+R V+D     ++R  ++  
Sbjct: 307 AC-----DSSNISYWIHNGFVTVDS---EKMSKSLGNFFTIRQVIDLYHPLALRLFLMGT 358

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                +++    ++  S+   +FY+      C S  
Sbjct: 359 HYRSPINYSDFLLESASER--IFYIYQTLHDCESAL 392


>gi|307188501|gb|EFN73238.1| Probable glutamyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 511

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 102/305 (33%), Gaps = 37/305 (12%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +  ++ +    K   V + F + +PTG +H+G  R A+     A     +G  + R   
Sbjct: 8   AANFQFLQRRFFKKYHVRVRF-APSPTGHLHLGGLRTALYNYLFAR--NNNGTFILR--- 61

Query: 167 INDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           I D   Q   +  +V       L+     D D   G   G Y++    EL  +   +LLN
Sbjct: 62  IEDT-DQTRIVPGAVEKLQDDLLWAGIIPDEDPTRGGPTGPYVQSSRLELYKEQVLKLLN 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             E  +     +  +  + K      +A+             H             + ++
Sbjct: 121 N-ESAYYCFCTETRLNLLRK------EAIKCGQIPKYDNRCRHFSKEEA-----KEMLKK 168

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
              Y       K  +T K   D         +   + D  ++KSDG  TY  A++     
Sbjct: 169 NSSY---CIRFKLSSTPKPFYDMVYGEVLHDISKTEGDPVIIKSDGYPTYHFANV----- 220

Query: 344 KYERGFDNMIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +  F  + +V+ G +      +   +  A      +        + L  +    K+SK
Sbjct: 221 -VDDHFMEISHVLRGVEWQISTPKHIMLYNAFGWDPPK-----YGHLPLILNADGSKLSK 274

Query: 403 RAGDF 407
           R GD 
Sbjct: 275 RQGDI 279


>gi|299139450|ref|ZP_07032625.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598719|gb|EFI54882.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 855

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P +  +  +   +   E   +  GK     +E +   P+G +H+GH R   +GD LA 
Sbjct: 18  IEPRWQARWDADPSLYAAEPHSS--GKPKFYCLEML-PYPSGQLHMGHVRNYSIGDALAR 74

Query: 153 LMAFSGYEV 161
            M   GY V
Sbjct: 75  FMWMRGYNV 83


>gi|296446359|ref|ZP_06888304.1| isoleucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256132|gb|EFH03214.1| isoleucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 1037

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 97/279 (34%), Gaps = 46/279 (16%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAAD- 337
           V   I    + +       +     F +           DDV      S  ++ +   D 
Sbjct: 582 VNARIAEAFEKEGADAWYEEGAAKRFLAPDHDPADYEKIDDVLDVWFDSGSTHAFTLEDS 641

Query: 338 -----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVR 390
                LA  K + + G D ++Y+ GSD   G+      +  +   + +A  +++L     
Sbjct: 642 VHFPGLAGIKRERDGGEDEVLYLEGSDQHRGWFHSS--LLESCGTRGRAPYDIVLTHGFT 699

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLDFDFCKVK 443
           L   G   KMSK  G+ +  + V+ + G+D +R       +    R   E+L       +
Sbjct: 700 LDEHG--HKMSKSKGNVVAPQKVIADAGADILRLWVASVDYSDDQRIGPEILKSVTDNYR 757

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
           +    N + ++    A  R      ++     D     R V+ + +E   +E++      
Sbjct: 758 KLR--NTIRWMLGTLAHYRI-----EERVAFADLPELERLVLHRLAEI-GAEVEAAYAAF 809

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542
           +Y +V+        P+        L S     +   R++
Sbjct: 810 DYKKVVA----LLTPF--------LTSDLSAFYFDIRKD 836


>gi|283954656|ref|ZP_06372174.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793848|gb|EFC32599.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 118

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S + K    I      +         K  I  +   P+G +H+GH R   +GD LA   
Sbjct: 5   ASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYY 64

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 65  RKIGFNV 71


>gi|300361465|ref|ZP_07057642.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354084|gb|EFJ69955.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 934

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 60/321 (18%), Positives = 105/321 (32%), Gaps = 58/321 (18%)

Query: 214 ADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
            DK+  ++L   E+    P      +  M+K  R D      +A  +   IF +EDD   
Sbjct: 422 VDKFRDQILAEIEKASFIPTWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPI 480

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  +     ++G            + +G           + + D   + F S   
Sbjct: 481 VTPETIEHVAQIFEKEGSNAWYTHTAEELLPKGFKSEHSPNGKFRKETDILDVWFDS--- 537

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + + DG                  GF   +Y+ GSD   G+       + AV+
Sbjct: 538 GSSWAGVMKERDG-----------------LGFPADLYLEGSDQYRGWFNLSLITSVAVT 580

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   VV ++G++ +R  +     +  +
Sbjct: 581 GKAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVVKQMGAEIIRLWVAGADTTSDV 637

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
                 +++ ++         +Y + R+  R       D D                  E
Sbjct: 638 AVSQDILRQSAE---------SYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYME 688

Query: 496 LQLIVHLAEYPRVIENATIAQ 516
           ++L        R+IE A    
Sbjct: 689 IKL-------NRLIEEAIETY 702


>gi|226198545|ref|ZP_03794112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225929468|gb|EEH25488.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 973

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 525 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 584

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 585 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 627

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 628 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 684

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 685 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 732

Query: 499 IV 500
             
Sbjct: 733 AR 734


>gi|220905335|ref|YP_002480647.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869634|gb|ACL49969.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 888

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        +  +    G   +I     N TG +H+GH     + D L        
Sbjct: 15  EARWRKHWEEDKTFTPDPDAPGEPFSIVIPPPNVTGALHIGHALNLTLIDVLCR------ 68

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                    + +  L+   +D        V  + +  E      
Sbjct: 69  ---------------------HARQKGKNVLWVPGTDHAGIATQNVVERALAAE-----G 102

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E ++  V ++      +I+ D ++A+    D          G  + +R +  
Sbjct: 103 KGRKDLGREAFIDRVWEWREDYGHRIL-DQIRAMGASVDWSRLRFTMDEGLSAAVRKVFV 161

Query: 279 NLARQGYVYEG 289
            L   G +Y+G
Sbjct: 162 QLYNDGLIYKG 172


>gi|217032547|ref|ZP_03438037.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298735844|ref|YP_003728369.1| valyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216945752|gb|EEC24376.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298355033|emb|CBI65905.1| valyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 872

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 97/319 (30%), Gaps = 42/319 (13%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  KG +  +     N TG +H+GH     + D L       GY+   +  ++ 
Sbjct: 29  IDGNEKIQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDH 88

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D                  E  +K    +L   +   
Sbjct: 89  AG--IATQNVVEKQLLSQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLG 139

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 140 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERK 199

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLA 339
           G +Y         K        R + LF  + +     D+  + L+            + 
Sbjct: 200 GALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDERYKHLVGQKAILPLINRTIP 259

Query: 340 YFKC------------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                           K   G D   Y +G  H             + ++K  +N    E
Sbjct: 260 IIADEHVEMEFGTGCVKVTPGHDFNDYEVGKRHHL-------EMIKIFDEKGILNAHCGE 312

Query: 388 LVRL----YRDGMPIKMSK 402
              L     RD +  K+ +
Sbjct: 313 FENLERLEARDKVVAKLKE 331


>gi|254456291|ref|ZP_05069720.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083293|gb|EDZ60719.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 875

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 58/214 (27%), Gaps = 39/214 (18%)

Query: 100 KILSSIVVSGIE--YGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVGDTLASL 153
           K + S V   I   + +N + K    + +F       N TG +H+GH     + D L   
Sbjct: 5   KYIHSDVEDKIYSYWEKNELFKPQNNSKKFSIVIPPPNVTGSLHMGHALNNSIQDLLVRY 64

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              + YE              +   ++     ++ L     D  E             E 
Sbjct: 65  HRMNNYETL-------WQPGTDHAGIATQALVERKLTTEKIDKNEIGR--EKFIEKVWEW 115

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y   ++N                         LK L    D   +           +
Sbjct: 116 KEQYGDIIINQ------------------------LKKLGCSCDWSRNAFTMDENLSKSV 151

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             +  +L  +  +Y+           +    D +
Sbjct: 152 IKVFVDLYNKDLIYKDKKLINWDTVLKTAISDLE 185



 Score = 36.8 bits (84), Expect = 9.4,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 12/98 (12%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+         K+   ++ +  LV   RD    KMSK  G+
Sbjct: 484 TGFD-IIFFW-------VARMIMFGTEFLNKEPFKDIYVHALV---RDEKGQKMSKSKGN 532

Query: 407 FITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKVK 443
            I    ++++  +D++RF +L        +     +VK
Sbjct: 533 VIDPLDLIEKYSADALRFTLLSMASPGTDVKLSEDRVK 570


>gi|206896117|ref|YP_002247032.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738734|gb|ACI17812.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 906

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 63/187 (33%), Gaps = 31/187 (16%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G D   G+ +     A  +  +     VL    V    D     MSK  G+ I   
Sbjct: 551 LYLEGYDQHRGWFQTSLLTAVPLKGQAPYKTVLSHGFV---LDESGRAMSKSLGNVIDPS 607

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            VV  VG+D +R  +L        D+       Q+  N    +   Y + R+ FR  +  
Sbjct: 608 DVVANVGADVLRLALLMS------DYTADIQVGQNIFNQASEI---YKKIRNTFRFMEGN 658

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKLAFYLYDL 528
                FD    + +P               L  +  +   + +A    E     FY +  
Sbjct: 659 L----FDFQSSDEVPFAEMKPLDRW----ILGRWTDMKRKLSSAFDNYE-----FYSF-- 703

Query: 529 ASVFHGH 535
            S+FH  
Sbjct: 704 VSIFHSF 710


>gi|60681847|ref|YP_211991.1| isoleucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253565554|ref|ZP_04843009.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|81315088|sp|Q5LCU8|SYI_BACFN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|60493281|emb|CAH08065.1| isoleucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251945833|gb|EES86240.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301163339|emb|CBW22889.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 1141

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 649 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + GSD +R+ M+   +  + L FD   ++E + K     Y  Y++         A     
Sbjct: 706 QYGSDPLRWYMITNSSPWDNLKFDVDGIEEVRRKFFGTLYNTYSFFALY-----ANVDGF 760

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +      P N  P   E D   L ++  L +    ++      EP
Sbjct: 761 EYKEADLPMNERP---EIDRWILSVLNTLVK---EVDTCYNEYEP 799


>gi|89070618|ref|ZP_01157898.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043765|gb|EAR49967.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 857

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS +     +       +     G   K  +  +   P+G +H+GH R   +GD +A
Sbjct: 3   RYTPSEIEPRWQAAWTEAETFVATREGDKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIA 62

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 63  RYKKATGHNV 72


>gi|331266178|ref|YP_004325808.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682850|emb|CBZ00467.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 665

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 105/346 (30%), Gaps = 71/346 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S  D      S + ++  + A     G    G      S+ +    + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLS 175

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------FDN 351
           + Q            D   +  DG               DLA  +  +  G        +
Sbjct: 176 KYQNRL-VEFFKSHPD--FITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKH 232

Query: 352 MIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYRDGM 396
           ++YV            G     +    +     V   V +   + + +   ++ +  D  
Sbjct: 233 VVYVWIDALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMK 292

Query: 397 --------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                           KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 293 LPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 338


>gi|298674878|ref|YP_003726628.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287866|gb|ADI73832.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 486

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 124/351 (35%), Gaps = 56/351 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                 G +H+G+ R  ++ D L   +   GY+V +   I D G  +             
Sbjct: 29  CGPTVYGRVHIGNIRSFLMADLLKRFLNLEGYQVRQAMNITDVG-HMT------------ 75

Query: 188 ALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFP-----EEKWLPIVKDYSVQA 240
               +DSD  E          K    ++ADKY    ++       ++  +       +  
Sbjct: 76  ----SDSDEGEDKLQVAADKEKLDPWKIADKYKQLFIDDLNKLNIDDADVYPRATQHINE 131

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           M+++I+             + ++ +       +   I      G +   +L   +S+   
Sbjct: 132 MIEVIKK------------LIDNGYAYVSGGNVYFDITKFPEYGKLSGNVLEKLQSQERA 179

Query: 301 KCDMDRKQ-----LLFRSTMVGDDV---DRPLLKSDGSYTYFAADLA--YFKCKYERGFD 350
             D  ++      L F  +   + +   D P  +    +    + +A  Y    + + FD
Sbjct: 180 VYDPYKRNPQDFVLWFSHSKYKNHIMNWDSPWGEGYPGWHIECSAMALKYLTDAFNKHFD 239

Query: 351 ----NMIYV-MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
                 I +  G + + +      +A +      +       +  L  +G   KMSK   
Sbjct: 240 SEKSTTIDIHTGGEDNKFPHHECEIAQSEGATGQKFVNYWMHVTHLLVEG--DKMSKSLN 297

Query: 406 DFITLRHVVDEVGS-DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
           +  TL  ++++    ++VR+++L     + L+F F  +  Q+ +N +  +Q
Sbjct: 298 NIYTLPDILNQGYKPEAVRYVLLTTHYRQKLNFTFKNL--QASQNAIDRLQ 346


>gi|296111094|ref|YP_003621475.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832625|gb|ADG40506.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 894

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 61/243 (25%), Gaps = 40/243 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE-----FVSANPTGPMHVGHCRCAVVGD 148
           +P+ +             +             E         N TG +H+GH     + D
Sbjct: 11  NPTAVETGRYDHWQEKKLFAPESNQAIQGNEPEPYAIVIPPPNVTGKLHLGHAWDTTLQD 70

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +       G +V            ++   ++   + +Q L +                 
Sbjct: 71  MIIRQKKMQGLDVL-------WLPGMDHAGIATQAKVEQRLRSE---------------- 107

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                         +   EK++  V D+        I+     + +  D          G
Sbjct: 108 ---------GVSRYDLGREKFVEQVWDWK-NEYAATIKQQWGKMGLSLDFDRERFTLDDG 157

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
               +  +  +L  +G +Y G          +    D +  +      G         +D
Sbjct: 158 LNKAVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIE--VIYQDDPGAFYHVQYPFTD 215

Query: 329 GSY 331
           G+ 
Sbjct: 216 GTT 218



 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 329 GSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
           G       D A  Y       G+D +I+         V R+       + ++   NVL+ 
Sbjct: 475 GWPENQTDDFARYYPTNTLVTGYD-IIFFW-------VARMMFQGKEFTGQRPFKNVLIH 526

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
            L+   RDG   KMSK  G+ +    V+++ G+D++R+ +       + + F + K+
Sbjct: 527 GLI---RDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKM 580


>gi|260463256|ref|ZP_05811457.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030846|gb|EEW32121.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 989

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 94/264 (35%), Gaps = 30/264 (11%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLF----RSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           V + I+   +++          +  F     ++     +D   +  D   T+        
Sbjct: 547 VNQRIMDAFETEGADAWFAAGAKERFLGNHDASRWRQVMDILDVWFDSGSTHVFT----L 602

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIK 399
           + + +  +   +Y+ GSD   G+      +  +   + +A  + ++     +  DG   K
Sbjct: 603 EDRPDLKWPADVYLEGSDQHRGWFHSS--LLESCGTRGRAPYDTVVTHGFTMDEDGR--K 658

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + V+ + G+D +R  ++    +     D    K   + N       AY 
Sbjct: 659 MSKSLGNTVVPQDVIKQSGADILRLWVV----TTDYWEDQRLGKNVLQTNID-----AYR 709

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           + R+  R         D +  P   +P+       E  ++  L+E   V+     A E  
Sbjct: 710 KLRNTVRWMLGTLAHDDGENVPLEAMPEL------ERLMLHRLSELDEVVRQGYDAFEFK 763

Query: 520 KLAFYLYD-LASVFHGHWSHGREN 542
           ++   L D +       +   R++
Sbjct: 764 RITRALIDFMVVELSAFYFDIRKD 787


>gi|254785975|ref|YP_003073404.1| cysteinyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511843|sp|C5BI15|SYC_TERTT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237685828|gb|ACR13092.1| cysteine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 458

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 54/382 (14%), Positives = 114/382 (29%), Gaps = 53/382 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  VV DTL  ++ +  Y+                    ++ R    +  +D  
Sbjct: 37  VHIGNARPVVVFDTLFRVLQYL-YDNV------------------IYARNITDI--DDKI 75

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +      G  +  +    A +Y  ++         P +  Y+ + + ++I      +N  
Sbjct: 76  MKAAAENGEPISALAARYAAEYERDMAQL--NALQPTIVPYATEHLEQMIAMTQALVNKG 133

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LL 310
           H                +   + ++   G +    L         +    +K      L 
Sbjct: 134 HAYAA---------DGHVLFDVQSMGDYGELSNRSLEDMLDGARVEVAPYKKYAGDFVLW 184

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370
             S       + P  +    +    + +       E+   N I + G          E  
Sbjct: 185 KPSADAEPGWESPWGRGRPGWHLECSAM------IEKHLGNTIDIHGGGRDLIFPHHENE 238

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            A           +   +   Y +    KMSK  G+F T+R +++    + +RF +L  +
Sbjct: 239 RAQSQCAHDGEQYVKYWMHNGYINIDGEKMSKSLGNFRTVRELLESFPGEVIRFALLSAQ 298

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               LDF    +++        Y            R+ ++        L          +
Sbjct: 299 YRSELDFSAELLEQSKASLDSLY---------GALRKTEEEILPAGPALAASPGFAALMD 349

Query: 491 FDTSELQLIVHLAEYPRVIENA 512
              + L  I  L +  R +  A
Sbjct: 350 DLNTPLA-ISELHQLARTVHKA 370


>gi|187929520|ref|YP_001900007.1| valyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309781704|ref|ZP_07676437.1| valine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187726410|gb|ACD27575.1| valyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308919345|gb|EFP65009.1| valine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 958

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 63/225 (28%), Gaps = 47/225 (20%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYG----RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           N  L+ S+    +     +  E        L        I+    N TG +H+GH     
Sbjct: 5   NQSLAKSFEPATIEQKWSAAWEAMGVSRATLEAGKPDFCIQLPPPNVTGTLHMGHAFNQT 64

Query: 146 VGDTLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
           + D L      +G         + AG   QI                             
Sbjct: 65  IMDGLTRHARMAGANTLWVPGTDHAGIATQI----------------------------- 95

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
                V +   D       +   EK++  V ++  Q+   I R  ++ +    D    E 
Sbjct: 96  -----VVERQLDAQGVSRHDMGREKFVEKVWEWKEQSGSTITRQ-VRRMGASID---WER 146

Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++   DP     + D+   L  QG +Y G               D
Sbjct: 147 EYFTMDPKMSRAVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSD 191


>gi|94676685|ref|YP_588685.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081495|sp|Q1LTM9|SYL_BAUCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94219835|gb|ABF13994.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 861

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  P  +   +         +         K     +   P+G +H+GH R   +GD L+
Sbjct: 4   FYDPKNIESTIQQYWHENNTFTVTEDFSKEKYYCLSMLPYPSGNLHMGHVRNYTIGDVLS 63

Query: 152 SLMAFSGYEVT 162
                 G  V 
Sbjct: 64  RYHRMLGKNVM 74


>gi|59712494|ref|YP_205270.1| glutamyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|67461596|sp|Q5E3L4|SYE_VIBF1 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|59480595|gb|AAW86382.1| glutamyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 95/280 (33%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQEAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           ++    +  EG Y          E+ D+         E+K       Y+ + ++  IR +
Sbjct: 61  MHWMGMEWDEGPYYQSKRFDRYNEVVDQL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  N A + G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMARYDANHPKIVAANAAAKEGDACVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G   +I   G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITQVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPMFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|53713564|ref|YP_099556.1| isoleucyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81825004|sp|Q64U07|SYI_BACFR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52216429|dbj|BAD49022.1| isoleucyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 1141

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 17/165 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 649 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           + GSD +R+ M+   +  + L FD   ++E + K     Y  Y++         A     
Sbjct: 706 QYGSDPLRWYMITNSSPWDNLKFDVDGIEEVRRKFFGTLYNTYSFFALY-----ANVDGF 760

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +      P N  P   E D   L ++  L +    ++      EP
Sbjct: 761 EYKEADLPMNERP---EIDRWILSVLNTLVK---EVDTCYNEYEP 799


>gi|117927949|ref|YP_872500.1| valyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648412|gb|ABK52514.1| valyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 888

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 34/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R+     V +G         +     +     N TG +H+GH     + D L       G
Sbjct: 24  RRHYERWVAAGYFTADATSSRPAYCIV-LPPPNVTGQLHMGHALNHSLMDVLTRRRRMQG 82

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           YE                            L+    D        V  + + +E   ++ 
Sbjct: 83  YET---------------------------LWLPGMDHAGIATQNVVERELAREGISRH- 114

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   EK++  V  +  +   KI+ D ++ L    D          G    +++I  
Sbjct: 115 ----DLGREKFVERVWQWKAEYGGKIL-DQMRRLGEGVDWTRERFTMDDGLSRAVQEIFR 169

Query: 279 NLARQGYVYEG 289
            L   G +Y  
Sbjct: 170 RLYADGLIYRA 180


>gi|76817250|ref|YP_335493.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254262772|ref|ZP_04953637.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254301827|ref|ZP_04969270.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|76581723|gb|ABA51197.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157811646|gb|EDO88816.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254213774|gb|EET03159.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 973

 Score = 42.2 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 525 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 584

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 585 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 627

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 628 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 684

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 685 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 732

Query: 499 IV 500
             
Sbjct: 733 AR 734


>gi|304389712|ref|ZP_07371671.1| valine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326888|gb|EFL94127.1| valine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 896

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 18/124 (14%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++  SD+VR+     +      FD  ++K   +      
Sbjct: 604 DPDHKKMSKSKGNVVTPMALLEKHSSDAVRYWAASARLGTDAAFDEGEMKVGRRL----- 658

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +  + A  +  D D  L P  V  +          LI  LA    VI +AT
Sbjct: 659 ----AIKLLNASKFALSMGGDADLVLDPALVTVEVD------RSLIATLA---EVITSAT 705

Query: 514 IAQE 517
            A E
Sbjct: 706 KAFE 709


>gi|167828413|ref|ZP_02459884.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 830

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 478 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 537

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 538 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 580

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 581 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 637

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 638 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 685

Query: 499 IV 500
             
Sbjct: 686 AR 687


>gi|164429584|ref|XP_964329.2| valyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|157073538|gb|EAA35093.2| valyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 1050

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 34/198 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +PS +             +      K    K  I     N TG +H GH     + DTL 
Sbjct: 98  NPSAVEAAWYQWWEKAGYFKPESCRKPSAGKFVIPLPPPNVTGALHCGHALANSLQDTLI 157

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE       + AG    ++   + W+ ++ +                      
Sbjct: 158 RWYRMKGYETLWVPGCDHAGISTQSVVEKMLWKKEKKIRQE------------------- 198

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
                          EK+  +V ++  +   +I     K +    D         +   +
Sbjct: 199 ------------LGREKFTDLVWEWKGEYHQRINNAQ-KLMGGSMDWSREAFTMDKNLTA 245

Query: 272 PIRDIIDNLARQGYVYEG 289
              +    L  +G +Y  
Sbjct: 246 ATMETFCRLHDEGLIYRS 263


>gi|296170485|ref|ZP_06852072.1| valine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894837|gb|EFG74559.1| valine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 885

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 57/212 (26%), Gaps = 33/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     +    +    +  +        +I     N TG +H+GH     + D L   
Sbjct: 16  DPAAAEGAIYQKWLDAGYFEADPTSNKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 75

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV  +  ++ AG                                V  + +  + 
Sbjct: 76  KRMQGYEVLWQPGMDHAGI---------------------------ATQSVVERQLAVD- 107

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L               G    +
Sbjct: 108 ----GKTKEDFGRELFVEKVWDWKRESG-GAIGGQMRRLGDGVAWSRDRFTMDEGLSRAV 162

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           R I   L   G +Y        S   Q    D
Sbjct: 163 RTIFKRLYDAGLIYRAERLVNWSTVLQTALSD 194



 Score = 38.7 bits (89), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 33/207 (15%)

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             +  Q+      L  L RD    KMSK  G+ I     VD  G+D++RF +    +   
Sbjct: 515 GRRGPQVPFTDVFLHGLIRDEFGRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGG 574

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
                     +           A    R+   +  +       +      +P   E   +
Sbjct: 575 -----DLAVSED----------AVRASRNFCTKLFNATRYALLNGAQLAPLPGHGELTDA 619

Query: 495 ELQLIVHLAEYPRV---IENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQA 550
           +  +   L     V   ++ A    E  +    LY  A   F   +         +   A
Sbjct: 620 DRWI---LGRLEEVRTEVDAALDGYEFSRACEALYHFAWDEFCDWY-----VELAKTQLA 671

Query: 551 NNRKLTMMRLQLVHAVASIINSGLNII 577
           +    T   L    AV   +   L ++
Sbjct: 672 DGNAHTTAVLA---AVLDTL---LRLL 692


>gi|317129281|ref|YP_004095563.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474229|gb|ADU30832.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 920

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 111/324 (34%), Gaps = 58/324 (17%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           + D     L    E  W+P   +  +  M++  R D      +A  +   +F  E++   
Sbjct: 416 IKDFREDLLKEINEVNWVPHWGETRLYNMVRD-RGDWCISRQRAWGVPIPVFYGENNEPI 474

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                I  + +   + G            + EG         T   + D   + F S   
Sbjct: 475 ITDETIEHVSNLFRKHGSNIWFEWDTIDLLPEGFKSEHSPNGTFTKETDIMDVWFDS--- 531

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
                       GS       +   + + +R  D  +Y+ GSD   G+     + A AV+
Sbjct: 532 ------------GSSH---QSVLEERAELQRPAD--MYLEGSDQYRGWFNSSLSTAVAVT 574

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL         DG   KMSK  G+ +    V+ ++G+D +R  +        +
Sbjct: 575 GKAPYKTVLSHGF---TLDGEGRKMSKSVGNVVVPDKVMKQLGADILRLWV------SSV 625

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
           D+       +  +N +  V   Y + R+ FR       D + +    N        D SE
Sbjct: 626 DYQAD---VRVSDNILKQVAEVYRKIRNTFRFMLGNIHDFNPETDKVNFE------DMSE 676

Query: 496 LQ--LIVHLAEYPRVIENATIAQE 517
           L   +IV L +  + + N+    +
Sbjct: 677 LDQYMIVKLNQLVKDVRNSYEEFQ 700


>gi|206561062|ref|YP_002231827.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|254782376|sp|B4E8Z7|SYI_BURCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|198037104|emb|CAR53025.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 945

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|159903438|ref|YP_001550782.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888614|gb|ABX08828.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 509

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 79/209 (37%), Gaps = 30/209 (14%)

Query: 353 IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           ++V+G D    H+ Y     A+  +   +  +          L R+G   KM K  G+ +
Sbjct: 255 VHVIGKDILRFHAIY---WPAMLMSAGLELPKKVFGHGF---LTREGQ--KMGKSLGNIL 306

Query: 409 TLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
               ++++ G D +R+ +L      +  DF   + ++    +    +     R  ++ R+
Sbjct: 307 DPELLLEQYGKDPIRWYLLSDIRFGQDGDFQQKRFQDLVNNDLANTIGNLLNRTSTMSRK 366

Query: 468 AKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526
             D   PD D +L   N+     E  TS L               A    +   +   + 
Sbjct: 367 WFDNGTPDFDINLEDSNLKLLAQESITSSL--------------LAYEEFDFKTVCETVI 412

Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKL 555
            LA+  + + ++ +  P     + +N++L
Sbjct: 413 KLATESNVYLNNTQ--PWTLIKEPSNKEL 439


>gi|53716620|ref|YP_105643.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642268|ref|ZP_00441027.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|124381802|ref|YP_001024052.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126447796|ref|YP_001078558.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|166999605|ref|ZP_02265442.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254173999|ref|ZP_04880662.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254200439|ref|ZP_04906804.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254204465|ref|ZP_04910818.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356692|ref|ZP_04972967.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823796|sp|Q62CD5|SYI2_BURMA RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|52422590|gb|AAU46160.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|124289822|gb|ABM99091.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126240650|gb|ABO03762.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147748051|gb|EDK55126.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147754051|gb|EDK61115.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025719|gb|EDK83842.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160695046|gb|EDP85016.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238523379|gb|EEP86818.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243064434|gb|EES46620.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 967

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|315180853|gb|ADT87767.1| leucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 858

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     S   +  +      K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPQDIEQKVQEHWESNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|284162388|ref|YP_003401011.1| leucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012385|gb|ADB58338.1| leucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 943

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 12/165 (7%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +GI            + I +   N  G +HVGHCR   +GD +A      G
Sbjct: 14  EKWQRAWEEAGIFQADPDDRPKFFITIPYPYLN--GNLHVGHCRTFTIGDAIARYKRMCG 71

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPG----VYLKHVG 210
           + V     +++   G  I  LA  +  R  +   +Y    D+P+           +    
Sbjct: 72  FNVLFPMGFHV--TGTPIIGLAELIKKRDPRTIEVYTKYHDVPKDILLTLTTPERIVEYF 129

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            + A+K   ++    + +      D   Q  ++     LK   + 
Sbjct: 130 AKEAEKALKDIGYSIDWRRKFTTTDEPYQKFIEWQFWKLKEKGLI 174


>gi|264677544|ref|YP_003277450.1| glutamyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262208056|gb|ACY32154.1| glutamyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 469

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 85/281 (30%), Gaps = 45/281 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A     +G +      I D       L  S        
Sbjct: 11  APSPTGFIHLGNIRSALYPWAFAR---ANGGDFVLR--IED-----TDLERSTQASVDVI 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   +  L   +  G + +    +  D+Y   L    E+ ++             +  ++
Sbjct: 61  LEGME-WLQLDHDEGPFYQ---MQRMDRYKQVLATLQEKGYVYPC---------YMSMEE 107

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQ--KCDM 304
           L AL         E      +             +    + EG+ P  + KT Q      
Sbjct: 108 LDALR--------EKQMAAKEKPRYDGTWRPEEGKVLPAIPEGVKPVLRFKTPQTGVVGW 159

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           D K          +  D  + + DG+ TY            +    ++I   G DH    
Sbjct: 160 DDKCKGRIEFQNSELDDLVIARPDGTPTYNFCVC---VDDMDMNITHVIR--GDDHVNNT 214

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R   +  A+              +    +    KMSKR G
Sbjct: 215 PRQIHIFEALGATVPTFAH-----LPTVLNEQGEKMSKRNG 250


>gi|256061831|ref|ZP_05451966.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325835|ref|ZP_05965032.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301815|gb|EEY05312.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|254703573|ref|ZP_05165401.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754206|ref|ZP_05997915.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261743959|gb|EEY31885.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|197335110|ref|YP_002156714.1| glutamyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690304|sp|B5FGU2|SYE_VIBFM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|197316600|gb|ACH66047.1| glutamyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 95/280 (33%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQEAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           ++    +  EG Y          E+ D+         E+K       Y+ + ++  IR +
Sbjct: 61  MHWMGMEWDEGPYYQSKRFDRYNEVVDQL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  N A + G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMARYDANHPKIVAANAAAKEGDACVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G   +I   G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITQVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPMFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|170751800|ref|YP_001758060.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658322|gb|ACB27377.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 905

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +   ++++     V L  LV   RD    KMSK  G+ +    ++D+VG+D +
Sbjct: 515 WVARMMMMGLHLTDRAPFETVYLHTLV---RDASGAKMSKSKGNVVDPLELIDQVGADVL 571

Query: 423 RFMM 426
           RF +
Sbjct: 572 RFTL 575


>gi|161619727|ref|YP_001593614.1| leucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260568878|ref|ZP_05839346.1| leucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|189082985|sp|A9M845|SYL_BRUC2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161336538|gb|ABX62843.1| leucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260154262|gb|EEW89344.1| leucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|148560314|ref|YP_001259646.1| leucyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371571|gb|ABQ61550.1| leucyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 894

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 22  RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 81

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 82  RYKRAKGFNV 91


>gi|32265964|ref|NP_859996.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|48428532|sp|Q7VIY7|SYL_HELHP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|32262013|gb|AAP77062.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 830

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R   +GD LA     +GY V
Sbjct: 48  PYPSGAIHMGHVRNYCIGDALARNYRQNGYNV 79


>gi|126456514|ref|YP_001075817.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312630|ref|ZP_04811647.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|126230282|gb|ABN93695.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135869|gb|EES22272.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 973

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 525 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 584

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 585 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 627

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 628 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 684

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 685 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 732

Query: 499 IV 500
             
Sbjct: 733 AR 734


>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 469

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 107/357 (29%), Gaps = 37/357 (10%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +  DT+     + GY+V    Y+++     + +                  
Sbjct: 35  IHIGNARPMIFFDTVRRYFEYRGYDV---NYVSNFTDVDDKIINKAI------------- 78

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             E       +     +   K    +   P  K     ++      M     +     + 
Sbjct: 79  --EEGVEASVISTRYIDECKKDMEAMNVLPATKNPLATEEIDGMEEMIGSLIEKGHAYVA 136

Query: 256 HDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
            D  +        D   +    ID L       +      K K  +  +     +L++  
Sbjct: 137 KDGTVYFRVKSFEDYGKLSHKNIDEL-------QSGFREIKVKGEEDKEDSNDFVLWKPK 189

Query: 315 MVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
             G+   D P  K    +      +       +   D  I + G          E   A 
Sbjct: 190 KDGEPYWDSPWSKGRPGWH-----IECSVMSKKYLGDQ-IDIHGGGEDLIFPHHENEIAQ 243

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            SE  +  +     +   + +    KMSK  G+F T+R + ++     +RF ML      
Sbjct: 244 -SESASGKSFANYWMHNAFLNIDNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYRS 302

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSI-FRQAKDIFPDLDFDLFPRNVIPQES 489
            L+F    +  ++ +N +  +       + +  R   D   D +        + ++ 
Sbjct: 303 PLNFSAELM--EASKNSLERILTGVENIKDVQKRNNADAITDAELSNLEIAKVLKDK 357


>gi|319899419|ref|YP_004159516.1| Leucyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403387|emb|CBI76951.1| Leucyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 874

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    +   +I      +     G+  K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRAQEQKWQAIWDEKKIFQATDDGEREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFHV 74


>gi|306841586|ref|ZP_07474283.1| leucyl-tRNA synthetase [Brucella sp. BO2]
 gi|306288332|gb|EFM59695.1| leucyl-tRNA synthetase [Brucella sp. BO2]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|254714649|ref|ZP_05176460.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717547|ref|ZP_05179358.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261219381|ref|ZP_05933662.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261322443|ref|ZP_05961640.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260924470|gb|EEX91038.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261295133|gb|EEX98629.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|62290672|ref|YP_222465.1| leucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|254689960|ref|ZP_05153214.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254698111|ref|ZP_05159939.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730995|ref|ZP_05189573.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256258215|ref|ZP_05463751.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260755495|ref|ZP_05867843.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260758718|ref|ZP_05871066.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762552|ref|ZP_05874889.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884516|ref|ZP_05896130.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297249064|ref|ZP_06932772.1| leucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309371|sp|Q57B80|SYL_BRUAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|62196804|gb|AAX75104.1| LeuS, leucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|260669036|gb|EEX55976.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672978|gb|EEX59799.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675603|gb|EEX62424.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260874044|gb|EEX81113.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297174197|gb|EFH33554.1| leucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|82700587|ref|YP_415161.1| leucyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024884|ref|YP_001935652.1| leucyl-tRNA synthetase [Brucella abortus S19]
 gi|237816173|ref|ZP_04595168.1| leucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260547092|ref|ZP_05822830.1| aminoacyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|123740877|sp|Q2YLH9|SYL_BRUA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238689396|sp|B2S7N1|SYL_BRUA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82616688|emb|CAJ11771.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Leucyl-tRNA synthetase bacterial/mitochondrial, class
           Ia [Brucella melitensis biovar Abortus 2308]
 gi|189020456|gb|ACD73178.1| Aminoacyl-tRNA synthetase, class I [Brucella abortus S19]
 gi|237788635|gb|EEP62848.1| leucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260095457|gb|EEW79335.1| aminoacyl-tRNA synthetase [Brucella abortus NCTC 8038]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|23502660|ref|NP_698787.1| leucyl-tRNA synthetase [Brucella suis 1330]
 gi|32171564|sp|Q8FYQ7|SYL_BRUSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|23348668|gb|AAN30702.1| leucyl-tRNA synthetase [Brucella suis 1330]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|89093367|ref|ZP_01166316.1| glutamyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082346|gb|EAR61569.1| glutamyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 500

 Score = 42.2 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 103/340 (30%), Gaps = 48/340 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           V+ +PTG  HVG    A+     A       ++     + TR             +  S+
Sbjct: 8   VAPSPTGDPHVGTAYIALFNLAFARQHGGQFILRIEDTDQTRS-----TAESEQKILDSM 62

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P     G Y +   K    KY+ +L+   +              +
Sbjct: 63  RWLGLEWDEGPDVGGP----FGPYRQSERKADYAKYAMQLVEEGKA------------FL 106

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
                ++L  L              + D +   D ++     G  Y   +  P+ +   +
Sbjct: 107 CYRTSEELDELRAARRAAGGHTALKQSDLALPEDEVEKRKAAGAPYVVRMVVPEGEGACE 166

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D   +  +      G    + LLKSDG  TY    LA     +     ++I   G +  
Sbjct: 167 VDDMLRGTI--ELEWGMVDAQILLKSDGMPTYH---LANVVDDHLMEITHVIR--GEEWI 219

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR---------AGDFITLRH 412
               + + +         ++  +      L R+    K+SKR                  
Sbjct: 220 NSAPKHKLLYEYFGWDMPKLCHM-----PLLRNPDKSKLSKRKNPTSILYYERMGFLPEA 274

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +++ +G           K S    FD   ++  S   P+F
Sbjct: 275 LLNYLGRMGWSMPDESEKFSRQQMFDNFDIQRVSLGGPIF 314


>gi|254509830|ref|ZP_05121897.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533541|gb|EEE36529.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 1022

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L +LV   RD    KMSK  G+ I    +VDE G+D++
Sbjct: 631 WVARMMMMQLAVVDQVPFHTVYLHQLV---RDEKGKKMSKTTGNVIDPLEIVDEFGADAL 687

Query: 423 RF 424
           RF
Sbjct: 688 RF 689



 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 78/237 (32%), Gaps = 17/237 (7%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +I  +   +G         +     I     N TG +HVGH     + D L   
Sbjct: 9   AAEAEARIYEAWEQAGAFKAGANRSRDESFTIMIPPPNVTGALHVGHAFNNTLQDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGA----QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
               G++   +   + AG     Q+  +  +     ++ L           + G Y   +
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQMQVEKMLAATGQPGRRELGREAFLDKVWEWKGEYGGTI 128

Query: 210 GKELA------DKYSSELLNFPEEKWLPIVKDYSV---QAMMKIIRDDLKALNIQHDIFI 260
            ++L       D   +        +      + S     A++K+  +  +   I     +
Sbjct: 129 IEQLKRLGSSCDWSRNAFTMAGAPRDPRTGHENSANFHDAVIKVFVEMYEKGLIYRGKRL 188

Query: 261 SEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLLFRSTM 315
              ++     + I D+ ++N+   G+++    P    +T +  + D    ++FR   
Sbjct: 189 V--NWDPHFETAISDLEVENIEVAGHMWHFKYPLAGGETYEYLEKDEDGAVIFREER 243


>gi|221124334|ref|XP_002162424.1| PREDICTED: similar to Valyl-tRNA synthetase [Hydra magnipapillata]
          Length = 979

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 58/202 (28%), Gaps = 45/202 (22%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG--AQINT 176
           +G   +I+    N TG +H+GH     + D+L      +G+        + AG   QI  
Sbjct: 63  QGKNFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMAGFNTAWIPGTDHAGIATQI-- 120

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               V  R  Q    +  DL                              E +   V ++
Sbjct: 121 ----VVERQLQEQKVSRHDL----------------------------GREAFTKKVWEW 148

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG------- 289
             ++    I   ++ +    D               + +    L  QG +Y G       
Sbjct: 149 KEKSG-NTITTQMRRMGDSVDWSREYFTMDPKLSQTVTETFVQLYEQGLIYRGKRLVNWD 207

Query: 290 -ILPPPKSKTTQKCDMDRKQLL 310
            IL    S    + + +   L 
Sbjct: 208 PILMSAVSDLEVESEEEDGSLW 229


>gi|218885370|ref|YP_002434691.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|254782391|sp|B8DPD6|SYI_DESVM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218756324|gb|ACL07223.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 938

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 117/351 (33%), Gaps = 60/351 (17%)

Query: 208 HVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFIS 261
            +  E  D  +  L     + +W+P   +  +  M++  R D      +   +     + 
Sbjct: 418 FIAMEKNDLRARALSAIRNDVRWIPAWGEERIHNMIE-FRPDWCISRQRTWGVPIIALLC 476

Query: 262 EDDFHRGDPSP-IRDIIDNLARQ----GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           E      + +  +RDI D  A+      Y YE  L          C         + T +
Sbjct: 477 EGCGEAWNDAAWMRDIADRFAKHPTGCDYWYETPLEGIVPAGLA-CPHCGGNHWKKETDI 535

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
            D        S  S++      A  + + +  F   +Y+ GSD   G+      + A++ 
Sbjct: 536 LD----VWFDSGTSFS------AVLEQRGDTAFPADLYLEGSDQHRGWFHSS--LLASMG 583

Query: 376 EK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            +       VL    V    DG   KMSK  G+ I  + ++D+ G++ +R  +      E
Sbjct: 584 TRGVPPYRAVLTHGYVV---DGEGRKMSKSIGNVIAPQEIIDKYGAEILRLWVASVDYRE 640

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-------LFPRNVIP 486
            +     ++  +  +        AY R R+  R       DL  +       + P +   
Sbjct: 641 DIRIS-DEILSRLVD--------AYRRIRNTCRYLLGNIDDLTPEEIVPFSVMDPLDRYA 691

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHW 536
            +   D                I+ A    E +K+   L++L  +     +
Sbjct: 692 LDIVTDAHAR------------IQEAYSEFEFHKVFHTLHNLCVTDLSAFY 730


>gi|167898466|ref|ZP_02485867.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 863

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|86158812|ref|YP_465597.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775323|gb|ABC82160.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 1052

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 53/189 (28%), Gaps = 32/189 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +        G  +G          +I     N TG +H+GH   A + D L      SG
Sbjct: 26  ARWYPFWQERGYFHGDEHDRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSG 85

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +        + AG     +                               V KEL     
Sbjct: 86  FNTLWLPGTDHAGIATQMI-------------------------------VEKELKKAEK 114

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               +   E +L  V  +  Q   + I +  KAL    D          G    +R++  
Sbjct: 115 KSRHDLGREAFLERVWAWKEQYGSR-IGEQHKALGASLDWQRERFTMDEGLSRAVREVFV 173

Query: 279 NLARQGYVY 287
            L  +G +Y
Sbjct: 174 RLHEEGLIY 182


>gi|17986526|ref|NP_539160.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|163845384|ref|YP_001623039.1| leucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225628361|ref|ZP_03786395.1| leucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225853251|ref|YP_002733484.1| leucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|254694452|ref|ZP_05156280.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254708340|ref|ZP_05170168.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254708807|ref|ZP_05170618.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256030333|ref|ZP_05443947.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256045403|ref|ZP_05448297.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256114371|ref|ZP_05455104.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256160504|ref|ZP_05458193.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255710|ref|ZP_05461246.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256263261|ref|ZP_05465793.1| leucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|256370211|ref|YP_003107722.1| leucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168007|ref|ZP_05754818.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260565705|ref|ZP_05836188.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|261214766|ref|ZP_05929047.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261222921|ref|ZP_05937202.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261315840|ref|ZP_05955037.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316300|ref|ZP_05955497.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261757452|ref|ZP_06001161.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265987367|ref|ZP_06099924.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991832|ref|ZP_06104389.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995671|ref|ZP_06108228.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265998880|ref|ZP_06111437.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294851046|ref|ZP_06791722.1| leucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|32171576|sp|Q8YJ44|SYL_BRUME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189082986|sp|A9WWT1|SYL_BRUSI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083245|sp|A5VSE9|SYL_BRUO2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782488|sp|C0RF58|SYL_BRUMB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17982131|gb|AAL51424.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|163676107|gb|ABY40217.1| leucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225616207|gb|EEH13255.1| leucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225641616|gb|ACO01530.1| leucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256000374|gb|ACU48773.1| leucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260151078|gb|EEW86173.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260916373|gb|EEX83234.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260921505|gb|EEX88158.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261295523|gb|EEX99019.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261304866|gb|EEY08363.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737436|gb|EEY25432.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262553569|gb|EEZ09338.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|262766955|gb|EEZ12573.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263002788|gb|EEZ15191.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093225|gb|EEZ17322.1| leucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659564|gb|EEZ29825.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294821689|gb|EFG38685.1| leucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|326409810|gb|ADZ66875.1| leucyl-tRNA synthetase [Brucella melitensis M28]
 gi|326539528|gb|ADZ87743.1| leucyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 877

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|300784293|ref|YP_003764584.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299793807|gb|ADJ44182.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 837

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 43/150 (28%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K +     SG         +    +I+      +G +H+GH       D LA      G
Sbjct: 21  AKWVPVWESSGAYRFDRTKTRDEVYSIDTPPPTVSGSLHIGHVFSFTHTDVLARFKRMRG 80

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            EV      +D G        + F    +     D D      PG  +  + +    +  
Sbjct: 81  LEVFYPMGWDDNGLPTERRVQNHFGVRCEPSLPYDPDFRPPEKPGKDVVAISRRNFVELC 140

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             L    E+ +  + +   +     +    
Sbjct: 141 ESLTETDEQAFERLWRQLGLSVDWTMTYQT 170


>gi|269302974|gb|ACZ33074.1| valyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 940

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 56/203 (27%), Gaps = 33/203 (16%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +G+        K     I     N TG +H+GH     + D L      SG+EV   
Sbjct: 23  WEKNGMFKAEASSDKPPYSVI-MPPPNVTGVLHMGHALVNTLQDVLVRYKRMSGFEVCWI 81

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
              + AG    T+                               V + L         ++
Sbjct: 82  PGTDHAGIATQTV-------------------------------VERHLQASEGKRRTDY 110

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
             E +L  +  +  ++  K+I   L+ L    D               ++     L   G
Sbjct: 111 SREDFLKHIWAWKEKSE-KVILSQLRQLGCSCDWDRKRFTMEPLANRAVKKAFKTLFENG 169

Query: 285 YVYEGILPPPKSKTTQKCDMDRK 307
           Y+Y G          Q    D +
Sbjct: 170 YIYRGYYLVNWDPVLQTALADDE 192


>gi|254715125|ref|ZP_05176936.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261216834|ref|ZP_05931115.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|260921923|gb|EEX88491.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 950

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|241889244|ref|ZP_04776547.1| leucyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864081|gb|EER68460.1| leucyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 809

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLY--RDGMPIKMSKRA 404
           +Y+ G++H+     Y +    V   +     +     L  + + L   +DG P KMSK  
Sbjct: 526 VYIGGAEHAVLHLLYARFWHKVLYDLGLVPTREPFQKLFNQGMILAEGKDGRPEKMSKSK 585

Query: 405 GDFITLRHVVDEVGSDSVRFMML 427
           G+ +    ++   G+D++R   +
Sbjct: 586 GNVVNPDDIIVSHGADTLRVYEM 608


>gi|121703584|ref|XP_001270056.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119398200|gb|EAW08630.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 994

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS--ANPTGPMHVGHCRCAVVGDTL 150
           +   +  K  +    S    G     +G K     +S    P+G +H+GH R   + D L
Sbjct: 50  IDKKWQAKWQADGPRSFPNGGAQKERRGDKPKSYILSMFPYPSGTLHMGHLRVYTISDVL 109

Query: 151 ASLMAFSGYEV 161
           A      G+EV
Sbjct: 110 ARFYRMKGHEV 120


>gi|220932714|ref|YP_002509622.1| glutamyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219994024|gb|ACL70627.1| glutamyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 491

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 110/338 (32%), Gaps = 46/338 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     +  +        DA       +  +    +  
Sbjct: 10  APSPTGDLHIGGVRTALFNWLFAR---HNNGDFILRIEDTDAQRSTEESSRQIIKALKWV 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D     G   G Y +   ++   K    LL   +  +     +       +  +  
Sbjct: 67  GLEWDEGPGVGGDYGPYFQSERQQFYQKAIDYLLENDKAYYCYCTPEEIEDMKKEADKRG 126

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A+       ++E++    +    + ++             L  P    T   D+ R +
Sbjct: 127 EPAIYSGKCCNLTEEERKELEKEGRKPVV------------RLKTPDEGYTVVKDIVRGK 174

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F + ++    D  ++KSDG  TY   + A     +  G  ++I     +H     +  
Sbjct: 175 VSFENRLL---EDLIIMKSDGKPTY---NFACVVDDHRMGITHVIR--ADEHLSNTPKQI 226

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VGSDSVRFMM 426
            V  A+              V +       K+SKR G   ++   +++  +    + +++
Sbjct: 227 MVYKALGYDIPNFAH-----VPMILAPDRTKLSKRHG-ATSVDEFMEQGYLPQALINYLL 280

Query: 427 LW----RKNSELL-------DFDFCKVKEQSKENPVFY 453
           L       N E++       DF    V +    NP  Y
Sbjct: 281 LLGWSPGNNDEIISLDRAIRDFKLDDVSK----NPAVY 314


>gi|330818072|ref|YP_004361777.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370465|gb|AEA61821.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 945

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  +   ++  Q L    ++GD+ +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEAGGIEAWQTLEARELLGDEANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K   +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDALQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ VR  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVSNRLGAEIVRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D D+         +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAKDALPAA-EWLEIDRYAIA 710


>gi|319405825|emb|CBI79457.1| glutamyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 471

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 100/310 (32%), Gaps = 66/310 (21%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTREYYINDAGAQINTL 177
            I   + +PTG +H+G  R A+     A       L+     +  R        A +  +
Sbjct: 3   VITRFAPSPTGFLHIGSARTALFNWLYAKHTGGKMLLRIEDTDRERS-----TEAAVKAI 57

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              + W       +  S            + V ++L     +                Y+
Sbjct: 58  IEGLHWMGLHYEGDPISQFK----RAERHRQVAEQLVKNGKAYYC-------------YA 100

Query: 238 VQAMMKIIRDDL--KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
               +  +R+D   K L  ++D                RD     A +G      +  P+
Sbjct: 101 TPEELAAMREDAFAKGLPPRYD-------------GRWRDRDIAEAPKGIKPVIRIKAPQ 147

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              T   D  +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I  
Sbjct: 148 DGETILHDRVQGDIRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGITHIIR- 200

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+DH     R   +  A+        + +   + L       K+SKR G          
Sbjct: 201 -GNDHLTNAARQAIIFNAMGWD-----IPIMAHIPLIHGENGAKLSKRHG---------- 244

Query: 416 EVGSDSVRFM 425
            +G D+ R M
Sbjct: 245 ALGIDAYRKM 254


>gi|300114688|ref|YP_003761263.1| isoleucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540625|gb|ADJ28942.1| isoleucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 940

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 35/260 (13%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           + H      + ++   +  +G      L P +   +Q    ++         VGD +D  
Sbjct: 488 ELHPDTSRLMEEVARRVEEKGIEAWFELEPKELLGSQAPAYEK---------VGDTLD-- 536

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQIN 382
            +  D   T+        + + E G    +Y+ GSD   G+ +     + A+        
Sbjct: 537 -VWFDSGVTHACV----LEARKELGVPADLYLEGSDQHRGWFQSSLLTSVAIRGTAPYRT 591

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL         D    KMSK  G+ +  + V++ +G+D +R  +        ++    ++
Sbjct: 592 VLTHGF---TVDAKGKKMSKSQGNVVAPQQVMESLGADILRLWVAATDYRGEMNVS-DEI 647

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH- 501
            ++  +        +Y R R+  R         D  +   + +  E+        L    
Sbjct: 648 LKRIAD--------SYRRMRNTARYLLANLNGFDPAI---HGVSAENMLALDRWALDRAS 696

Query: 502 LAEYPRVIENATIAQEPYKL 521
           L +    I  A      + +
Sbjct: 697 LLQ--AEIVQAYEDYNFHLI 714


>gi|291320072|ref|YP_003515330.1| valyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752401|emb|CBH40372.1| Valyl tRNA synthetase (Valine tRNA ligase)(VALRS) [Mycoplasma
           agalactiae]
          Length = 829

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS   K +S   V    + ++ + K     +     N TG +H+GH     + DT+   
Sbjct: 9   TPSKFEKAVSKKWVDKKIFSKHDLTKKPFSLL-LPPPNVTGALHIGHALDQYIQDTILRF 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    +YI  AG  ++   ++   +                        V + L
Sbjct: 68  KKLEGYDT---FYI--AG--MDHAGIATQSK------------------------VERIL 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +           EK+L  + ++  +      R     L I  D         +     +
Sbjct: 97  METEGVSKHTLGREKFLERIWEWK-EEYANKFRKQWHLLGIGLDFERERFTLDKLSNDAV 155

Query: 274 RDIIDNLARQGYVYEGI 290
             +   L  +G +Y+  
Sbjct: 156 NKVFIELYNRGLIYKDT 172


>gi|256827073|ref|YP_003151032.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583216|gb|ACU94350.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 948

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 16/176 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +           +    NV+ C       D    KMSK  G+ I   
Sbjct: 573 VYLEGSDQHRGWFQSSLLCGIGAFGQAPYKNVICCGF---TVDENGEKMSKSKGNGIDPA 629

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V ++ G+D +R  +        +D    +       +       AY R R+ FR    +
Sbjct: 630 QVANKYGADVLRLWVAS--TDYSVDVSVGESILARTSD-------AYRRFRNTFRFL--L 678

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
               DFD     V   +S     +  L+  LA     +       + +++   LYD
Sbjct: 679 GSLADFDPETDAVASFDSLLPADQWALVR-LARLLDDVNAGYDLYQYHRVFRALYD 733


>gi|167849864|ref|ZP_02475372.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 880

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 525 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 584

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 585 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 627

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 628 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 684

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 685 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 732

Query: 499 IV 500
             
Sbjct: 733 AR 734


>gi|1931613|gb|AAB51589.1| valyl tRNA synthetase [Arabidopsis thaliana]
          Length = 248

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP+ + K   +       +  +         I     N TG +H+GH   + + DT+   
Sbjct: 141 SPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRW 200

Query: 154 MAFSGYEVTREYYINDAGA 172
              SGY       ++ AG 
Sbjct: 201 KRMSGYNALWVPGVDHAGI 219


>gi|13471197|ref|NP_102766.1| valyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|75543677|sp|Q98LB1|SYV_RHILO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14021941|dbj|BAB48552.1| valyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 927

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 27/163 (16%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           +++     P +  +++         G +                 L   ST+   D    
Sbjct: 463 EYYLALEGPWKAWVEDRLEN--FQPGEILTRDEDVLDTWFSS--ALWPFSTLGWPDQTPE 518

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           L       TY+  D+         GFD +I+         V R+  +     +++    V
Sbjct: 519 LK------TYYQTDV------LVTGFD-IIFFW-------VARMMMMGLHFMDEEPFHTV 558

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            +  LV   RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 559 YVHALV---RDKNGAKMSKSKGNVIDPLDLIDEYGADALRFTL 598


>gi|116624918|ref|YP_827074.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122252610|sp|Q01U81|SYL_SOLUE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116228080|gb|ABJ86789.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 810

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 19/59 (32%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
               +             Y         K  +  +   P+G +H+GH R   +GD LA 
Sbjct: 7   DHIAIELKWHERWQDAQFYKAEENSAKPKFYVLEMLPYPSGTLHIGHIRNYSIGDALAR 65


>gi|311693403|gb|ADP96276.1| isoleucyl-tRNA synthetase [marine bacterium HP15]
          Length = 939

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 57/319 (17%), Positives = 103/319 (32%), Gaps = 47/319 (14%)

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNI 254
           Y       +  +  +  +  L      +W+P      ++AM        I R     + I
Sbjct: 418 YRATPQWFISMDKENLRADALEAIQGVRWVPSWGKNRIEAMFNQSPDWCISRQRTWGVPI 477

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCD--MDRKQLL 310
              I     + H    + I  +   +   G    YE           ++ +   D   + 
Sbjct: 478 TLFIHKETQELHPDTQNLIEQVAKQIEEGGIDAWYELDASSLLGSDAEQYEKVTDTLDVW 537

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHS-GYVKRLE 368
           F S +  + V R                     + E G F   +Y+ GSD   G+ +   
Sbjct: 538 FDSGVTHESVLRV--------------------REELGQFPADMYLEGSDQHRGWFQSSL 577

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             + A++       VL         DG   KMSK  G+ I  + V++E+G+D +R  +  
Sbjct: 578 KTSIAMNGVAPYRQVLTHGF---TVDGKGHKMSKSLGNVIAPQEVMNELGADILRLWVAA 634

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD---LFPRNVI 485
              S  +      +++ +           Y R R+  R         D +   + P ++I
Sbjct: 635 TDYSGEMTVSKDILRQTADG---------YRRIRNTSRFLLSNLTGFDPEQHMVAPEDMI 685

Query: 486 PQESEFDTSELQLIVHLAE 504
             +       LQL   L E
Sbjct: 686 ALDRWMVDRALQLQEELDE 704


>gi|229824608|ref|ZP_04450677.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
 gi|229785979|gb|EEP22093.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
          Length = 480

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 106/371 (28%), Gaps = 57/371 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R AV  DT+     + GY+V    Y+++     + +  +       
Sbjct: 35  CGPTVYNYIHIGNARSAVAFDTIRRYFQYRGYQV---NYVSNFTDVDDKIIKAAIA---- 87

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                +   PE              +ADKY +      +   L I        +M+ I +
Sbjct: 88  -----EGSTPE-------------AIADKYIAAFKE--DTGQLNIQAATVHPRVMENIEE 127

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 I     + E  +       +    ++    G++ +  L       +++ D    
Sbjct: 128 I-----IAFVQTLIEKGYAYESEGDVYFKTESFKDYGHLSDQSLEDLLVGASERLDQAVA 182

Query: 308 ---------QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
                     L   +       D P       +    + +A       +   + I + G 
Sbjct: 183 ERKANPLDFALWKTAKPGEIAWDSPWGPGRPGWHIECSVMAT------KYLGDTIDIHGG 236

Query: 359 DHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                    E  +A + +               +       KMSK  G+F+ LR ++   
Sbjct: 237 GQDLTFPHHENEIAQSEACTGHTFAHYWLHNGFVTIGKQDEKMSKSLGNFVLLRDLLAAY 296

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
               +R+M+        L +D   + E          Q    + R   R+ K        
Sbjct: 297 DPMVIRYMLATTHYRRPLRYDEAVITEA---------QANVNKLREAIRRLKHRQEQASA 347

Query: 478 DLFPRNVIPQE 488
           DL        E
Sbjct: 348 DLEGHETWLAE 358


>gi|226320825|ref|ZP_03796378.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233767|gb|EEH32495.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 480

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 115/335 (34%), Gaps = 43/335 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                 G+ +  + +   + + ++        P++  +       +  ++KI+ +     
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKNTY 144

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +++     F         D+ID           +  P       K +     L F 
Sbjct: 145 FSNGNVYFDTSCFKSYGEMAGIDLIDK---------DMTLPRVDVDKFKRNKTDFVLWFT 195

Query: 313 STMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--YVKR 366
           ++   D     D P       + Y +  L       E   D + I++ G DH G  ++  
Sbjct: 196 NSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHHINE 250

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFM 425
           +      +++K   + V    L+  Y      KMSK  G+FIT++ + D+       R++
Sbjct: 251 IAIAECFLNKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDFRYL 305

Query: 426 MLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
            L       L F     +  + ++EN +  + Y Y
Sbjct: 306 CLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|187629798|sp|A4XHE2|SYC_CALS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 465

 Score = 42.2 bits (98), Expect = 0.27,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 115/369 (31%), Gaps = 48/369 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DTL     + GYEV       D   ++                    +
Sbjct: 35  IHIGNARPLIVFDTLRRYFEYKGYEVIYIQNFTDVEDKM--------INRANKEGITVFE 86

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           L E +    Y K   +    + +       E +         +  + ++I     A  + 
Sbjct: 87  LAERFIQ-EYYKDADRLNVRRATKSPRATEEIED-------MIALIQRLIDKGY-AYVVD 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++     F        ++I D +A       G    P  K     D     L      
Sbjct: 138 GDVYFRTRKFAEYGKLSHKNIEDLMA-------GARVDPSEKKEDPLDF---ALWKAKKE 187

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                + P  +    +    + +A    KY       I +            E   A   
Sbjct: 188 GEPAWNSPWGEGRPGWHIECSVMA---MKY---LGQTIDIHAGGQDLIFPHHENEIAQSE 241

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               +       L   Y +    KMSK  G+F T+R ++++   +++R  ML     + L
Sbjct: 242 AATGKPFARFW-LHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300

Query: 436 DFDFCKVKEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +F    +++            EN  F +Q A +       +  D       +L  + +  
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSS-----ENDDKLKAAIEELKAKFIDA 355

Query: 487 QESEFDTSE 495
            E + +T+E
Sbjct: 356 MEDDLNTAE 364


>gi|289191089|gb|ADC93657.1| aminoacyl tRNA synthetase AK-1 [synthetic construct]
          Length = 860

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     VS  P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQLHWDKKRTFEVTEDESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|284007101|emb|CBA72376.1| methionyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 675

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 23/207 (11%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A +     +           + +++  +   +Q  +     Y G   P +       
Sbjct: 194 DLPAFSKMLQTWTRSGALQPQVANKMQEWFEAGLQQWDITRDAPYFGFEIPNEPGKYFYV 253

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +D       +     +    +  +      F ADL +F  K      +++Y     HS 
Sbjct: 254 WLDAPIGYMGTFKNLCEKQPDIDFASFWQQDFTADLYHFIGK------DIVYF----HSL 303

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +     A+      +K     +      +  +G   KMSK  G FIT R  +D++ +D +
Sbjct: 304 F---WPAILEGSGYRKPTNIFVHGY---ITVNGA--KMSKSRGTFITARAYLDQLDADCL 355

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R+    + +S + D D        + N
Sbjct: 356 RYYYAAKLSSRIDDIDLNLEDFVQRVN 382


>gi|255262212|ref|ZP_05341554.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104547|gb|EET47221.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 460

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 100/303 (33%), Gaps = 27/303 (8%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +V D L  L+  + Y      Y+ +     + +  +   R +     +    
Sbjct: 38  HLGNARPVLVFDVLYRLLRHT-YGADHVTYVRNFTDVDDKINATALARQEAGAKGS---- 92

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E        + +   LAD  +   L  P            + AM++ + +   A   + 
Sbjct: 93  LEDLIAERSDETISWYLADMGALGALE-PNHAPRATAYIAPMVAMIEGLIEGGHAYAKEG 151

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                   +        R + D +A                   K D     L   ST  
Sbjct: 152 HALFRVRSYKEYGALSGRSVDDMIA----------GARVEVAPFKEDPMDFVLWKPSTED 201

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAAAVS 375
               D P  +    +    + +AY        FD  I+  G+D    + +   A +    
Sbjct: 202 QPGWDSPWGRGRPGWHIECSAMAY--DLLGPAFD--IHGGGNDLQFPHHENEIAQSKCCG 257

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSEL 434
              AQ+ +               KMSK  G+F T+R ++D+ V  + +RF+ML     + 
Sbjct: 258 HDFAQVWMH-----NEMLQVEGKKMSKSLGNFFTVRDLLDQGVPGEVIRFVMLSTHYRKP 312

Query: 435 LDF 437
           +D+
Sbjct: 313 MDW 315


>gi|225018393|ref|ZP_03707585.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
 gi|224948811|gb|EEG30020.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
          Length = 928

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     A A        NV     V    DG   KMSK   + +   
Sbjct: 560 LYLEGSDQYRGWFQSSLLTAVATKGTAPYKNVCTHGWVV---DGEGRKMSKSMQNGVAPE 616

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R  +        +      +K+ S+         AY + R+  R     
Sbjct: 617 KIISQYGTDILRLWVASSDYHADVRISPEILKQLSE---------AYRKIRNTARFILGN 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D +    + +   S  +  +  L+  L    + +  A  A + + +
Sbjct: 668 ISDFDPN---TDKVDNSSLHEIDKWALVK-LDALIKKVNEAYNAFDFHII 713


>gi|189485695|ref|YP_001956636.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226735068|sp|B1GYT2|SYC_UNCTG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170287654|dbj|BAG14175.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 465

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 119/382 (31%), Gaps = 63/382 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P   +H+GH R  VV D +   +   GY V       D   +I   +     +  +    
Sbjct: 33  PYDEVHLGHARVYVVFDIVKRHLLRRGYIVKHIQNFTDVDDKIVKRSQEKNMKPSELAQI 92

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK---------------WLPIVKDY 236
              D          LK        +   E++NF +E                 +   KDY
Sbjct: 93  YIEDYFVQAGRLNILKAEKYPCVTQMIPEIVNFIKELVNKGLAYEIGGDIYFSVEKFKDY 152

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                 K+ + +LK L     + +       G  S     +    ++    E     P  
Sbjct: 153 G-----KLSKRNLKDLRAGARVGVC-----NGKNSAFDFALWKKTKENEPREVTWESPWG 202

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           K      ++   +   S ++GD +D      D  + +   ++A  + K  + F       
Sbjct: 203 KGRPGWHIECSAM--SSELLGDTIDIHGGGQDLIFPHHENEIAQSEAKTGKKFVKYWI-- 258

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              H+G+V                                  KMSK   +F TL+ + ++
Sbjct: 259 ---HNGFVT-----------------------------INKEKMSKSLNNFFTLKAIFEK 286

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                VR+ +L +  S  LDF       +S  N +  +   Y R  S  +++     D D
Sbjct: 287 YNPRVVRYYLLTQHYSSPLDFS--DAGIESARNTLQGMDGTYLRLISSVKESDVEITDKD 344

Query: 477 FDLFPRNVIPQESEFDTSELQL 498
                 N +    +   SE  L
Sbjct: 345 LSDLQGNFLSALDDDFNSEKAL 366


>gi|153839089|ref|ZP_01991756.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747427|gb|EDM58387.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MEWLGLEWDEGPYYQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFEDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +  R+  +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|57237973|ref|YP_179222.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73621970|sp|Q5HU13|SYL_CAMJR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57166777|gb|AAW35556.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058532|gb|ADT72861.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 809

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++ +    K  +      P+G +H+GH R   +GD LA      G+
Sbjct: 11  KWQKIWDENEYFEPKDDLNLPKKYILSMF-PYPSGRIHMGHVRNYTIGDVLARYYRKIGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|70941249|ref|XP_740936.1| methionine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56518992|emb|CAH87109.1| methionine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 504

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 18/180 (10%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKV 442
           +      L  DG   KMSK   + I  + +++  GSD+ RF ++   K    + FD   +
Sbjct: 119 VFSHGFVLASDGK--KMSKSLKNVIDPKEIIEAYGSDAFRFHVVKESKTGYDMRFDIDNL 176

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
            +    +    +     R  S+               F  N       +D  +++L   +
Sbjct: 177 VDMCNSDLADTIGNLVQRTLSL--------------CFLSNNAKIPPLYDDIDIELPFCM 222

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
             +   IE        +K      ++    +   +      + +     N+KL ++RL L
Sbjct: 223 LHFINRIEYYMKNFRVHKFCEKTVNVCKDLNKFLTDL-APWKYKQESEQNKKLHIIRLML 281


>gi|28897536|ref|NP_797141.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364597|ref|ZP_05777199.1| glutamate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878298|ref|ZP_05890653.1| glutamate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898128|ref|ZP_05906624.1| glutamate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260901939|ref|ZP_05910334.1| glutamate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|32130092|sp|Q87RL6|SYE_VIBPA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|28805748|dbj|BAC59025.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308086117|gb|EFO35812.1| glutamate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308090142|gb|EFO39837.1| glutamate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106760|gb|EFO44300.1| glutamate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308115107|gb|EFO52647.1| glutamate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328473468|gb|EGF44316.1| glutamyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 474

 Score = 42.2 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MEWLGLEWDEGPYYQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFEDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +  R+  +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|319778575|ref|YP_004129488.1| Glutamyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108599|gb|ADU91345.1| Glutamyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 470

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 49/281 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---- 184
           + +PTG +H+G  R A+     A              + N  G  +  +  +   R    
Sbjct: 12  APSPTGFLHLGGARTAIFSWAFAK-------------HNN--GTFVLRIEDTDLERSTPE 56

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             QA+ +    L   Y  G Y +    +   +   EL+      +      YS    ++ 
Sbjct: 57  AVQAILDGMEWLGIDYDEGPYYQTKRFDRYKEVIEELIKKGLAYYC-----YSTPEEVEK 111

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +R++ +A  ++     +                +       V EGI P  + K      +
Sbjct: 112 MREEARAKGLKPKYDGTWRP-------------EEGKALPPVPEGIEPVVRFKNPLTGSV 158

Query: 305 DRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
               +      + +D   D  + + DG+ TY   +       Y+ G  ++I   G DH  
Sbjct: 159 SWSDMFKGEISISNDELDDLIIARKDGTPTY---NFCVVVDDYDMGITHVIR--GDDHVN 213

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
              R   +  A+  +  +        V +  D    K+SKR
Sbjct: 214 NTPRQINILKAMGAQVPE-----YGHVPMILDQDGKKLSKR 249


>gi|306845518|ref|ZP_07478087.1| isoleucyl-tRNA synthetase [Brucella sp. BO1]
 gi|306273839|gb|EFM55666.1| isoleucyl-tRNA synthetase [Brucella sp. BO1]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|294084072|ref|YP_003550830.1| glutamyl- and glutaminyl-tRNA synthetase [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663645|gb|ADE38746.1| Glutamyl- and glutaminyl-tRNA synthetase [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 456

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 20/105 (19%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D  +L++DG+ TY    LA     ++ G  ++I   G DH     R   V   +      
Sbjct: 166 DMVILRADGTPTYM---LAVVVDDHDMGVTHVIR--GDDHLNNAFRQYMVYHGMGWD--- 217

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
             V +   + L       K+SKR G           +G D+ R M
Sbjct: 218 --VPIFAHIPLIHGADGAKLSKRHG----------ALGVDAYRDM 250


>gi|237717378|ref|ZP_04547859.1| glutamyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406143|ref|ZP_06082693.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644038|ref|ZP_06721815.1| glutamate--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294810190|ref|ZP_06768857.1| glutamate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443361|gb|EEO49152.1| glutamyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262357018|gb|EEZ06108.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640562|gb|EFF58803.1| glutamate--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294442602|gb|EFG11402.1| glutamate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 505

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    + D  +  G   G Y +   +E+  KY   LL   +  ++       
Sbjct: 57  EEYILESFKWLGIHFDEGVSFGGECGPYRQSERREIYKKYVQVLLENGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A    I               S     R   +  ++ +D L  +G  Y        ++
Sbjct: 116 LDAKRAEI--------ANFQYDASTRGMMRNSLTMPKEEVDALIAEGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVNDLIRGEVIINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|254523440|ref|ZP_05135495.1| valyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721031|gb|EED39556.1| valyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 942

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 53/214 (24%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      L         +     G+G    I     N TG +H+GH     + D L   
Sbjct: 9   DPKSFETDLYEAWEKAGHF--KPSGRGEPYTILLPPPNVTGTLHMGHAFQQTLMDALVRY 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+   +   + AG     +         +    +                     
Sbjct: 67  HRMRGYDTLWQVGTDHAGIATEMVVSRNLTLEGKGETRDS-------------------- 106

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        E ++  V ++  Q+    I   ++ L    D   S         + +
Sbjct: 107 ----------LGREGFIGKVWEWKQQSG-DTIERQMRRLGTSADWSRSTFTMDPQPSAAV 155

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +       QG +Y G          +    D +
Sbjct: 156 NEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|170078301|ref|YP_001734939.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692812|sp|B1XP90|SYL_SYNP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169885970|gb|ACA99683.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 852

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 88/283 (31%), Gaps = 38/283 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K     +  G++   +   K     +      P+G +H+GH R  V+ D +A      G
Sbjct: 12  AKWQQQWLELGLDKTPSQSDKPKFYALSMF-PYPSGKLHMGHVRNYVITDVIARYKRMQG 70

Query: 159 YEVTR-----------EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203
           Y V             E    D G            + ++ L      +           
Sbjct: 71  YRVLHPMGWDAFGLPAENAAIDRGIPPAKWTYQNIAQMREQLKQLGLSIDWDREVATCSP 130

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y K         Y + L    E     +  D   Q ++   + D +  +      I E 
Sbjct: 131 DYYKWTQWLFLQFYKAGLAYQKEAA---VNWDPIDQTVLANEQVDAEGRS-WRSGAIVEK 186

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
              R     I D  + L +     +G          ++  + ++  + +ST  G  ++ P
Sbjct: 187 KLLRQWFLKITDYAEELLQDLNTLDG--------WPERVKLMQENWIGKST--GAHLEFP 236

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
           ++ SD         +A F  + +  F  + YV+ +     V +
Sbjct: 237 VVGSD-------EKVAVFTTRLDTVFG-VTYVVLAPEHPLVAQ 271


>gi|90410990|ref|ZP_01219004.1| glutamyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328203|gb|EAS44514.1| glutamyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 474

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 90/279 (32%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLFA---KHMGGEFVLR--IED--TDLERSTQEAIDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y          +L D+         E+K       Y  + ++  +R++
Sbjct: 61  MEWLGMDWDEGPYYQTKRFDRYNQLVDQL------LAEDKAYKC---YCPKELLDELREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++     +       + +   D           +      PK  T    D  R +
Sbjct: 112 QMAAGVKPRYDANHPKIVAANAAATED---------SAFCIRFRNPKEGTVVFEDKVRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 163 IEIANSELD---DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPEFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|33240397|ref|NP_875339.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|48428531|sp|Q7VBZ5|SYL_PROMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33237924|gb|AAP99991.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 870

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 14/137 (10%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
            IN  L        D +  KMSK   + +    V+D+ G+D+ R  +L++   E    D 
Sbjct: 607 DINTPLDPETGEPLDVLYEKMSKSKYNGVDPASVIDKYGTDTARMFILFKAPPEK---DL 663

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
              +   +    F  +       SI  +        D ++         ++    E +LI
Sbjct: 664 EWDESDVEGQYRFLNRLWRIVIYSIETK--------DINISNCTQEILLNDLSDKERKLI 715

Query: 500 VHLAEYPRVIENATIAQ 516
             L      I+  T   
Sbjct: 716 KVL---NNTIKEVTNDL 729



 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +   S    G+   +             +   P+G +H+GH R  V+ D +A L    G
Sbjct: 25  RWQQSWKEQGLYKTKEPTKSQKTFYALSMFPYPSGTLHMGHVRNYVITDVIARLHRMKG 83


>gi|29840436|ref|NP_829542.1| valyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539536|sp|Q822K4|SYV_CHLCV RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29834785|gb|AAP05420.1| valyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 940

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 32/214 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  L   L +       +            I     N TG +H+GH     + D L   
Sbjct: 11  DPKGLEDKLYAFWEGSGMFTAQSASDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRY 70

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG+EV      + AG    T+                               V + L
Sbjct: 71  KRMSGFEVCWVPGTDHAGIATQTV-------------------------------VERHL 99

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                   ++F  E+++  V ++  ++   +I   L+ L    D               +
Sbjct: 100 YASLGKRRIDFSREEFIKHVWEWKEKSE-GVILSQLRQLGCSCDWSRLRFTMEPLANRAV 158

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     L  +G++Y G          Q    D +
Sbjct: 159 KKAFKALFDKGHIYRGYYLVNWDPVLQTALADDE 192


>gi|114331418|ref|YP_747640.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313769|sp|Q0AG57|SYL_NITEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114308432|gb|ABI59675.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 868

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           ++   S   +GI     +  K     +      P+G +H+GH R   +GD L+      G
Sbjct: 12  QQARQSWQETGIFNTTEIPDKPKYYCLSMF-PYPSGKLHMGHVRNYTIGDVLSRYRRMQG 70

Query: 159 YEVT 162
           Y V 
Sbjct: 71  YNVM 74


>gi|325295230|ref|YP_004281744.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065678|gb|ADY73685.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 912

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              V       ++      K  +  +   P+G +H+GH R   +GD +A      GY V 
Sbjct: 12  WQRVWEERGVFKSKPTGKEKYYVLEMFPYPSGRIHMGHVRNYSIGDVIARFKKMFGYNVI 71


>gi|312375470|gb|EFR22840.1| hypothetical protein AND_14142 [Anopheles darlingi]
          Length = 720

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 68/241 (28%), Gaps = 42/241 (17%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
             V      R         +I     N TG +H+GH     + D L       G +    
Sbjct: 19  HTVDADLVNRQRSEDTKLYSILLPPPNVTGELHLGHALTCTIQDALIRHNRNRGRKTLWI 78

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
             ++ AG     +                               V K +  + +      
Sbjct: 79  PGMDHAGIATQVV-------------------------------VEKRIRKERNMTRHEL 107

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
             E++L  V  +  +   + IR  LK L    D               +++    L   G
Sbjct: 108 GRERFLEEVWRWKHEKEAR-IRTALKQLGSTMDWNREYFTMDEQQSVAVKEAFVRLFESG 166

Query: 285 YVYEGILPPPKSKTTQ----KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
            +Y        S + +      +++  QL+  +++     DR +    G       D+AY
Sbjct: 167 LIYRDQSLVNWSCSLESAISDVEVENVQLVGPTSLALPGYDRNVTF--GRMV----DIAY 220

Query: 341 F 341
            
Sbjct: 221 R 221


>gi|312136980|ref|YP_004004317.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224699|gb|ADP77555.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 931

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 10/161 (6%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              +    +          K+ I      P+G MHVGH R   V D  A      GY V 
Sbjct: 10  WQKIWEESKIFEADPNDKKKIFITVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVL 69

Query: 163 --REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPGV-YLKHVGKELADKY 217
               +++   GA +  +A  +  +    L  Y     +PE          ++ +  + +Y
Sbjct: 70  FPMAWHV--TGAPVVGIAKRIERKDPWTLKTYKEVHKVPEDELKKFSDPHYIVEYFSKEY 127

Query: 218 SSELLNFPEE-KWLPIVK--DYSVQAMMKIIRDDLKALNIQ 255
              +        W    K  D   Q  ++     LK + + 
Sbjct: 128 KKIMKKMGYSIDWRREFKTTDPHYQKFIEWQMKKLKEMGLI 168


>gi|299133888|ref|ZP_07027082.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591724|gb|EFI51925.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 523

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 91/333 (27%), Gaps = 52/333 (15%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH   A+  D LA      G +V      ++ G ++   A        +    
Sbjct: 21  PNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQTAQKENMTPHELATR 80

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           N     E           +++                           D  + +      
Sbjct: 81  NAGRFKEMDQRLNISFDRFIRTSEPAHHASTQEIWRRMAASG------DIYLDSYAGWYS 134

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKCDM 304
              +A   + +  + ED   RG      + ++  +   +   Y+  L             
Sbjct: 135 VRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLYESQPDFIGP 194

Query: 305 DRKQLLFRSTMVGDDVDRPLLKS--------------------DGSYTYFA----ADLAY 340
           D ++    S + G   D  + ++                    D    Y       D   
Sbjct: 195 DSRRNEIVSFVKGGLKDLSISRTTFDWGVKVPNDPEHVMYVWVDALTNYITGIGFPDEKA 254

Query: 341 FKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
              KY    D  ++++G D    H+ Y     A   A      +       L        
Sbjct: 255 ANWKY-WPAD--VHIIGKDIIRFHAVY---WPAFLMAAGIPVPKRVYAHGFLFN-----R 303

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             KMSK  G+ +    + D+ G D +R+  L  
Sbjct: 304 GEKMSKSVGNVVDPFVLADQYGVDQMRYFFLRE 336


>gi|294812614|ref|ZP_06771257.1| Valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294325213|gb|EFG06856.1| Valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 875

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 22  APAEVEGKLYERWVERGYFTADATSEKPPYTIVIPPPNVTGALHLGHAFQVTLMDALTRR 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E             ++   ++   + +Q L                        
Sbjct: 82  KRMQGFETL-------WLPGMDHAGIATQNKVEQQL------------------------ 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   + +   V  +  +   +I+   L+ L    D          G    +
Sbjct: 111 -AEEGKSRHDLGRDAFTERVWQWKDEYGGRILGQ-LRRLGAGLDWSRERFTMDEGLSRAV 168

Query: 274 RDIIDNLARQGYVYEG 289
           + I  NL     +Y  
Sbjct: 169 QTIFKNLYDDELIYRA 184


>gi|253753801|ref|YP_003026942.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|251820047|emb|CAR46270.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292558559|gb|ADE31560.1| Methionyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
          Length = 667

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 106/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV                 L    +  +    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEV------------FYLTGLDEHGQKIEEKAK 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K    LL+   +K++    DY  + +  +    L  
Sbjct: 63  EAGLTPQAYVDG-------MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVTGGIAPS----GHEVAWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLAYFKCKYERG------ 348
              R +   D      +     ++ DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDKLVEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSN 229

Query: 349 FDNMIYVM-----------GSDHSGYV--------KRLEAVAAAV----SEKKAQINVLL 385
             +++YV            G      V             V   +    S     + ++L
Sbjct: 230 PKHVVYVWIDALLNYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMML 289

Query: 386 CELV--RLYRDG----MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              +  RL   G       KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 290 DMKLPDRLVAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|256822692|ref|YP_003146655.1| glutamyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796231|gb|ACV26887.1| glutamyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 472

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 84/491 (17%), Positives = 150/491 (30%), Gaps = 119/491 (24%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G  V R   I D   + +T          QA
Sbjct: 8   APSPTGYLHVGGARTALYCWLYAK--KHQGTFVLR---IEDTDRERST------DESVQA 56

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           + +    L   +  G Y +    E   +   E+L+   + +        + A+ +  + +
Sbjct: 57  ILDGMQWLHLEHDEGPYYQTRRFERYKEVIGEMLDKG-QAYRCYCSKERLDALREEQQAN 115

Query: 249 LKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + +    H   +SE +     P  IR                   PK  T    D+ + 
Sbjct: 116 KQNIGYDGHCRGLSEAEQDLSKPHVIR----------------FKNPKEGTVVFDDLIKG 159

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           Q+   ++ +    D  + ++DG+ TY    +       +    ++I   G DH     R 
Sbjct: 160 QISVNNSEID---DLIIARTDGTPTYNFTVV---VDDLDMEITHVIR--GDDHVNNTPRQ 211

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------ 415
             +  A+        V L   V +       ++SKR G    +++  D            
Sbjct: 212 INMIKALGRD-----VPLYAHVPMILGDDGKRLSKRHGAVSVMQYRDDGYLPQALLNYLV 266

Query: 416 ---------EV--GSDSVRFMMLWRKNSELLDFDFCKV--KEQSKENPVFYVQYAYARCR 462
                    EV    + + +  L   N     F+  K+    Q     +           
Sbjct: 267 RLGWSHGDQEVFSVEEMIEYFDLTDVNRAPSAFNTDKLNWLNQHYMKELP---------- 316

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
                A+++   L + L  + V              I  L   P + E            
Sbjct: 317 -----AEEVIKHLQWHLDQQAVDTSNGPN-------IKLLI--PEMAERVKT-------- 354

Query: 523 FYLYDLASV----FHGH--WSHGRENPRLRFVQANNRKLTMMRLQ------------LVH 564
             L +LAS     +H    +  G     LR V     ++   +L             LV 
Sbjct: 355 --LKELASAVRYFYHDFEEFDAGAAKKHLRPVAREPLEVIKSKLVQANDWTAESLHSLVS 412

Query: 565 AVASIINSGLN 575
           A A  +  G+ 
Sbjct: 413 ATAEELEIGMG 423


>gi|107023450|ref|YP_621777.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690532|ref|YP_836155.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123071992|sp|Q1BUA1|SYI_BURCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200198|sp|A0K9T5|SYI_BURCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|105893639|gb|ABF76804.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648621|gb|ABK09262.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|88608052|ref|YP_506420.1| isoleucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600221|gb|ABD45689.1| isoleucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 1045

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 96/304 (31%), Gaps = 45/304 (14%)

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKI-----IRD 247
           +P  Y     +K    EL +  +    +  E    KWL   KD+++           I  
Sbjct: 408 VPSWYLSVSKIKERMLELNESINWIPSHLKESLVGKWLENAKDWAISRNRFWGTPVPIWK 467

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDI----IDNLARQGYVYEGILPPPKSKTTQKCD 303
                  + D++ S  +  R     I D+    ID L R+          P  K+     
Sbjct: 468 STDPAYPRVDVYGSITEIERDFGVKITDLHRPFIDTLTRKN------PDDPTGKSFMVRV 521

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                  F S  +                Y   +  +F+  +   F   I    +   G+
Sbjct: 522 ESVLDCWFESGSMPF----------AQAHYPFENKEWFEKNFPSDF---ITEYVAQTRGW 568

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              L  ++ A+          L   V L +DG   K+SKR  ++   + + DE G+D++R
Sbjct: 569 FYTLMVLSVAL-FDSVPFKNCLAHGVILDKDGK--KLSKRLNNYKDPKELFDEYGADALR 625

Query: 424 FMMLWRKNSELLDFDFCK-----------VKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           F+ML             K           + +       F+  YA      +  +  D  
Sbjct: 626 FLMLSSSVMNGGTLLIDKGGEIIKDVVRLILKPLYSAYNFFATYANYHSIRLLNEVNDSA 685

Query: 473 PDLD 476
             LD
Sbjct: 686 NLLD 689


>gi|134296685|ref|YP_001120420.1| isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166200199|sp|A4JH32|SYI_BURVG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134139842|gb|ABO55585.1| Isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 102/309 (33%), Gaps = 41/309 (13%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
                   Y R R+  R       D DF    ++ +P +   +     +    A+    +
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDF---AQHAVPVDEWLEIDRYAVAFS-AQLQTEL 719

Query: 510 ENATIAQEPYKLA----FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
                  E + +      Y    +    G +    ++ RL    A++R     +  L H 
Sbjct: 720 LGHYEKYEFHPVVAKLQTYC---SEDLGGFYLDVLKD-RLYTSAADSRARRSAQTALYHL 775

Query: 566 VA---SIIN 571
                 ++ 
Sbjct: 776 TQGLLRVLA 784


>gi|325963359|ref|YP_004241265.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469446|gb|ADX73131.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 842

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 96  SYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           + +      +     +    +   +  +  ++     P+G +H+GH     +GD +A  +
Sbjct: 28  AAMEAKWPQVWEDLKVFTPVDDGSRERRYVLDMF-PYPSGDLHMGHAEAFAMGDVVARYL 86

Query: 155 AFSGYEV 161
              GY+V
Sbjct: 87  RQKGYDV 93


>gi|322378713|ref|ZP_08053144.1| valyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380661|ref|ZP_08054813.1| valyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146983|gb|EFX41731.1| valyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148856|gb|EFX43325.1| valyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 877

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 13/219 (5%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            L K   SI      +  +         +     N TG +H+GH     + D LA     
Sbjct: 16  ALEKHYYSICQDRGYFEVDKDTNKPPFALMMPPPNITGRLHIGHALTFSLQDILARFKRM 75

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY V  +  ++ AG  I T  +      +Q +   +           +++ V +     
Sbjct: 76  DGYRVLYQPGLDHAG--IATQNVVEKQLLEQGIKKEEIG------REAFIQKVLEWKEAC 127

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD----PSP 272
               +    +               + + R   +A     D  +     +  +       
Sbjct: 128 GGQIVEQMQQLGISCAWSRLRFTMDIGLERAVKQAFKTWFDQGLIVQGTYMINWCCKDGA 187

Query: 273 IRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
           + DI ++    QG +Y       +           + L 
Sbjct: 188 LADIEVEYAEEQGKLYHLRYFLEQGGLVIVATTRPETLF 226



 Score = 37.6 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 33/147 (22%)

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW--------RK 430
            ++      L  L RD    KMSK  G+ I    +++  GSDS+RF +          R 
Sbjct: 514 GELPFKHIYLHALVRDEKGEKMSKSKGNVIDPLEIINTEGSDSLRFALAMLCVQGRDLRL 573

Query: 431 NSELLD---------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           N E++          +       +S       +Q     C+S   +      +       
Sbjct: 574 NKEVITQARHFTHKLYHASLFLSKSLIEAGGNLQVNLIECKSTLGRYAKSRLNAT----- 628

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRV 508
                      T E++L + L  +   
Sbjct: 629 -----------TKEVRLALELYRFNDA 644


>gi|297170267|gb|ADI21304.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_09F21]
          Length = 793

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 74/222 (33%), Gaps = 54/222 (24%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ G +H+     Y +    V   +   E       LL + + L +DG   KMSK  G+
Sbjct: 508 LYIGGVEHAILHLLYARFFHKVLRDMKLVEGDEPFKKLLTQGMVL-KDGA--KMSKSKGN 564

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +     ++  G+DS+R  M++    E       +  +   E    +++  YA    I  
Sbjct: 565 VVDPEKYIELYGADSIRTFMIFASPPEQS----LEWSDNGLEGCHRFLKRLYALSEKIKN 620

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA-------------- 512
           +++D F D +  +            D  E +L         V+ +               
Sbjct: 621 RSEDTFKDSNTSIEEEIKELSIKINDDYEKRL-----NLNTVVSSCMEIFNKLNRRIDKN 675

Query: 513 ---TIAQE----------------PYKLAFYLYD--LASVFH 533
                  E                P+ +  YLY+  L   F+
Sbjct: 676 KITADENEFLKVYEFLLISLSPIAPH-ICEYLYEDVLEKNFN 716


>gi|307297022|ref|ZP_07576838.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306877548|gb|EFN08776.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 838

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 2/131 (1%)

Query: 92  YLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P     +  ++          +   K     +E     P+G +H+GH R   +GD L
Sbjct: 4   RFNPLEADARWQAAWDEKQTFKASDSSEKPRSYVLEMF-PYPSGRIHIGHVRNYSMGDVL 62

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A     +G+EV      +  G      A+       +  Y N +++        +     
Sbjct: 63  ARFRRMTGHEVLHPMGWDAFGMPAENAAMEKKVHPGKWTYENIANMKAQLKKLGFALDWS 122

Query: 211 KELADKYSSEL 221
           +E+A  +    
Sbjct: 123 REVATCHPDYY 133



 Score = 38.4 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           G   KMSK   + +    ++ + G+D+VR+ ML     E
Sbjct: 610 GRVEKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPE 648


>gi|295695330|ref|YP_003588568.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410932|gb|ADG05424.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 890

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 73/211 (34%), Gaps = 42/211 (19%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   STM   +    L +      YF  D+         GFD +IY         V R+
Sbjct: 466 ALWPFSTMGWPEETEDLRR------YFPTDV------LVTGFD-IIYFW-------VARM 505

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             ++ A + +     V +  LV   RD    KMSK  G+ I    VV++ G+D++RFM+ 
Sbjct: 506 IFMSLAFTGEVPFHTVYIHGLV---RDSQGRKMSKSLGNGIDPLDVVNKYGADALRFMLA 562

Query: 428 WRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
                     F + KV+        F  +   A    +    K++  DL   +  R    
Sbjct: 563 SGTAPGNDQRFYWEKVESARH----FANKIWNAARFVLLNVDKEVGGDLKGAVLGR---- 614

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQE 517
                          L      + + T A E
Sbjct: 615 ------PEHW----ILHRLNETVRDVTEALE 635


>gi|288917103|ref|ZP_06411473.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp. EUN1f]
 gi|288351472|gb|EFC85679.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp. EUN1f]
          Length = 886

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V R  A   A+    A I+  +        D    KMSK  G+ +T   ++++ GSD+VR
Sbjct: 559 VLRSHAEFGALPWSDAAISGWIL-------DPDRKKMSKSKGNVVTPMGLLEQHGSDAVR 611

Query: 424 FMMLWRKNSELLDFDFCKVK 443
           +     +      FD  ++K
Sbjct: 612 YWAASGRPGTDTAFDVGQMK 631



 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 42/153 (27%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +        G       + +    +++      +G +HVGH       D +A      G
Sbjct: 25  ARWAQEWQERGTYSFDRSVPRERVYSVDTPPPTVSGSLHVGHVFSYTHTDLIARFQRMRG 84

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
            EV      +D G        + +          D D      PG     + +    +  
Sbjct: 85  REVFYPMGFDDNGLPTERRVQNYYGVRCDPSLPYDPDFAPPAKPGKDQVPISRRNFVELC 144

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            +L    E+ +  + +   V          + A
Sbjct: 145 EKLTIEDEKGFEELWRRLGVSVDWSYTYATIDA 177


>gi|269965438|ref|ZP_06179557.1| Glutamyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829917|gb|EEZ84147.1| Glutamyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 475

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MEWLGLEWDEGPYYQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +  R+  +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|256849116|ref|ZP_05554549.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256713892|gb|EEU28880.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 477

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 122/402 (30%), Gaps = 53/402 (13%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   + + +    E  + L+     + +          +H+G+ R A+  DT+     + 
Sbjct: 2   LAVRVYNTLTRKKEEFKPLVPGHISMYV--CGPTVYNYIHIGNARSAIAFDTIRRYFEYK 59

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+V       D   ++   A +      +      +              +  E A  +
Sbjct: 60  GYDVKYVSNFTDVDDKMINEARAEKTTVPKLAEKFINAFLADT------TALNIEPATLH 113

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                   +           +   +K + D+  A  +  D++     F           I
Sbjct: 114 PRATHEIND-----------IITFVKSLIDNGYAYEVDGDVYYRAKKFKHYG-QLSDQNI 161

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFA 335
           + L       E I    +S+     D     L  ++    D++  D P  K    +    
Sbjct: 162 EQLEEG--ASEHINDTEQSRKEDPIDF---ALW-KAQKEPDEIGWDSPWGKGRPGWH--- 212

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV---LLCELVRLY 392
             +       +   D  I + G          E   A    K  +  V   L    V + 
Sbjct: 213 --IECSVMSTKYLGDT-IDIHGGGQDLEFPHHENEIAQSEAKTGKKFVNYWLHNGFVTVG 269

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK----- 447
           +D    KMSK   +F+T+  ++ EV    +RF M   +    +++    + + +      
Sbjct: 270 KD--QEKMSKSLHNFVTVHDILREVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRF 327

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
           +N V  + Y         R A D   +   +L    +   E 
Sbjct: 328 KNTVTNINY---------RLAYDTASEESAELAQAIMATNEK 360


>gi|229815837|ref|ZP_04446161.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
           13280]
 gi|229808532|gb|EEP44310.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
           13280]
          Length = 532

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 353 IYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I + G          E   A A                 L  DG   KMSK  G+F TL 
Sbjct: 264 IDIHGGGSDLAFPHHENECAQATCAWHEGFANTWMHTGMLLVDGE--KMSKSLGNFFTLA 321

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+++  + ++R +ML       LDF + ++  +  EN +  +    A      + A D 
Sbjct: 322 EVLEKHSAAALRLLMLQTHYRSPLDFSWERL--EGAENSLARI----AGTCRNLKWAADH 375

Query: 472 FP-DLDFDLFPRNVIPQESEFDTSE 495
              + + +L        E      E
Sbjct: 376 AEGEPNAELADALTAAMEKAAADYE 400


>gi|163814266|ref|ZP_02205655.1| hypothetical protein COPEUT_00417 [Coprococcus eutactus ATCC 27759]
 gi|158449901|gb|EDP26896.1| hypothetical protein COPEUT_00417 [Coprococcus eutactus ATCC 27759]
          Length = 558

 Score = 41.8 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 103/311 (33%), Gaps = 39/311 (12%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL------MAFSGYEV 161
             +E             +   + +PTG MH+G    A++   LA        +     + 
Sbjct: 19  DDLEKRFPERDLPEGARVTRFAPSPTGYMHIGGLYAAMISRKLAKQSGGVFYLRIEDTDR 78

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            RE  + D   +I          + +  +     +  G Y     K + +    K   E 
Sbjct: 79  KRE--LEDGVNEIINSLKKFDLGFDEGPFEGGETIY-GPYKQSERKEIYQTCVKKLMQEG 135

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             +P         D++    +  IR   +A  +    +    ++  G       I + LA
Sbjct: 136 YAYP---------DFTTAEELDEIRAKQEAAKVDIGYYG---EYAVGRKLTYEQIEEKLA 183

Query: 282 R-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA---- 336
             + YV     P    KT    D  R ++     +    +D  LLKSDG  TY  A    
Sbjct: 184 AGEPYVVRLKSPGEAGKTVIYSDPIRGKIEMPENI----MDVVLLKSDGIPTYHFAHAVD 239

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D         RG + +     + +  + K+L  +      K A I  ++   V +  +G 
Sbjct: 240 DHFMRTNLVIRGDEWL-----ASYPLH-KQLFDLCGFALPKYAHIAPIMKLEVTVDEEGE 293

Query: 397 PI---KMSKRA 404
                K+SKR 
Sbjct: 294 HQRKRKLSKRK 304


>gi|294853217|ref|ZP_06793889.1| isoleucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294818872|gb|EFG35872.1| isoleucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|256014987|ref|YP_003104996.1| isoleucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255997647|gb|ACU49334.1| isoleucyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|257125299|ref|YP_003163413.1| leucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049238|gb|ACV38422.1| leucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 892

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         +    N I       +  + A P+G +HVGH R   +GD +A      G+
Sbjct: 13  KWQDKWFEEDVFKSENKIEGKENYYVLEMFAYPSGKLHVGHLRNYAIGDAIARYKKMKGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|226289429|gb|EEH44937.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 1002

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 21/168 (12%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N Y++  YL +    +      + R       +  +        G +HVGH    ++ D 
Sbjct: 3   NYYITSKYLVRCTDDLYT----WQRRQRPIENRFVLHDGPPYANGDLHVGHALNKILKDI 58

Query: 150 LASLMAFSGYEVTREYYINDA---GAQINTLALSVFWRYQQAL---YNNDSDLPEGYYPG 203
           +  +   +G    R  Y++     G  I   AL +  +          N+     G    
Sbjct: 59  VCRVQLAAG---KRIDYVSGWDCHGLPIELKALELQAQRDAGKVQSSGNEKGNANGNLGA 115

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
             +++  ++LA+K   E +           + ++V A        +  
Sbjct: 116 ATIRNAARQLAEKTVVEQM--------KGFRQWAVMADWNNSWKTMDK 155


>gi|242309306|ref|ZP_04808461.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524347|gb|EEQ64213.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 812

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 12/229 (5%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +   + K           Y         K  I  +   P+G +H+GH R   + D +A  
Sbjct: 4   NAKVIEKKWQEFWEKTNAYEPKEDKNLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARN 63

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+ V      +  G      A+      +Q  Y N  ++    Y   +     +EL
Sbjct: 64  YRKQGFNVLHPIGWDAFGMPAENAAIKNKTHPKQWTYANIENMKNQLYSLGFSFSKTREL 123

Query: 214 AD---KYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDLKALNI------QHDIFISE 262
           A    +YS    +   + W    I +           +  L    +      + D  + +
Sbjct: 124 ATCDLEYSKWEQSLFIDMWEKGLIYRKKGYLNWCPNDQTVLANEQVIEGKCWRCDTQVVQ 183

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            + ++     I D  + L R     EG  P       +      + L F
Sbjct: 184 KEMYQY-YIKITDYAEELLRDLDTLEGKWPNQVLTMQRNWIGKSRGLSF 231



 Score = 37.2 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 344 KYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPI 398
           KY  G D   Y+ G +H+     Y +    V   +   K ++  + L     + +DG   
Sbjct: 522 KYWMGVDE--YIGGIEHAILHLLYSRFFTKVLRDLGYTKISEPFLHLLTQGMVTKDGA-- 577

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           KMSK  G+ +  + ++++ G+D+ R  +L
Sbjct: 578 KMSKSKGNVVDPQEIIEQYGADTARLFIL 606


>gi|170697699|ref|ZP_02888787.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170137447|gb|EDT05687.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|170016653|ref|YP_001727572.1| methionyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803510|gb|ACA82128.1| Methionyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 705

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 110/348 (31%), Gaps = 76/348 (21%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVT----------------------REYYIND 169
           P+G + +G+    V+ D  A      G +V                          Y++ 
Sbjct: 48  PSGKLQLGNTYTTVLADAAARYHRLLGEQVHFLTGTDEHGLKIQQKAEAAGTSEIAYLDG 107

Query: 170 AGAQI-----------NTLALSVFWRYQQALYNNDSDLPE--GYYPGVYL---------K 207
              QI           +    +   R+++A+    + L E    Y G Y           
Sbjct: 108 MAKQIKDLWQLMDISYDDFIRTTEERHEKAVQKIFNTLFEKGDIYKGEYEGWYSVSDEEY 167

Query: 208 HVGKELADKYSSELLNF-----PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS- 261
               +LA+ Y  +         P    + +VK+ +    M    D L      H  FI  
Sbjct: 168 FTESQLAEVYHDDAGKMIGGKAPSGHEVELVKEEAYFFKMSKYADWLLDYYKTHPEFIQP 227

Query: 262 EDDFHRGDPSPIRDIIDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           E   +    + I   +++LA  +  V  GI  P   K      +D   L    T +G D 
Sbjct: 228 EARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID--ALSNYITALGYDS 285

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D   L  D  +      +     ++       IY               +  A+  +  +
Sbjct: 286 DNTDLF-DKFWPANVQLVGKEIVRFHT-----IY------------WPIMLHALGLELPK 327

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             +    LV   +DG   KMSK  G+ I    +    G D+VR+ +L 
Sbjct: 328 SVIGHGWLVM--KDG---KMSKSKGNVIYPEVLEARYGLDAVRYYLLR 370


>gi|163856326|ref|YP_001630624.1| valyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163260054|emb|CAP42355.1| valS [Bordetella petrii]
          Length = 961

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 66/257 (25%), Gaps = 48/257 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
            +  +     G       +  G       I+F   N TG +H+GH     + D L     
Sbjct: 28  ARWYAEWERRGYFTAGQHVKMGTDPEPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHR 87

Query: 156 FSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
             G +       + AG   QI                                  V +  
Sbjct: 88  MRGDDTVFVPGTDHAGIATQI----------------------------------VVERR 113

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D       +   EK++  V ++  Q+    I   ++ L    D               +
Sbjct: 114 LDAEKVSRHDLGREKFIEKVWEWKEQSG-NTITGQVRRLGASADWPREYFTMDDRMSRGV 172

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            +    L +QG +Y G         L    S    + +     +        D     + 
Sbjct: 173 VETFVRLYQQGLIYRGKRLVNWDPKLLTAVSDLEVQSEEVDGHMWHILYPFVDGPQTIVD 232

Query: 326 KSDGSYTYFAADLAYFK 342
           K   + T     +A  +
Sbjct: 233 KDGQTVTLRGMTIATTR 249


>gi|161620279|ref|YP_001594165.1| isoleucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|161337090|gb|ABX63394.1| isoleucyl-tRNA synthetase [Brucella canis ATCC 23365]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|53722340|ref|YP_111325.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|81824514|sp|Q63KP6|SYI2_BURPS RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|52212754|emb|CAH38786.1| putative isoleucyl-tRNA synthetase [Burkholderia pseudomallei
           K96243]
          Length = 967

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|237756572|ref|ZP_04585094.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691272|gb|EEP60358.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 768

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 40/236 (16%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    +      +V +  LV   RD    KMSK  G+
Sbjct: 359 TGFD-IIFFW-------VARMIMMGTKFTNDVPFKDVYIHALV---RDEKGEKMSKTKGN 407

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I    + ++ GSD++RF +           D    +++ +        Y +   +    
Sbjct: 408 VIDPLEMAEKYGSDALRFTLASLAAQGR---DIRLSEKRIEG-------YKHFSNKI--- 454

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-- 524
                F  ++ + +      +       +  ++  L +    IEN+T   E Y+   Y  
Sbjct: 455 WNASKFVLINSEDYDGKANLESLSLSIEDYWILTKLNK---TIENSTKELENYRYNEYAN 511

Query: 525 -LYDLASVF--HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
            LYD    F  H +     E  + R  + +  +       L      ++   L ++
Sbjct: 512 ILYD----FFWHDYCDWYIELSKERIYKGSPEEKKTALTVLNF----VLRESLKLL 559


>gi|254392444|ref|ZP_05007625.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440938|ref|ZP_08215672.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197706112|gb|EDY51924.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 20  APAEVEGKLYERWVERGYFTADATSEKPPYTIVIPPPNVTGALHLGHAFQVTLMDALTRR 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E             ++   ++   + +Q L                        
Sbjct: 80  KRMQGFETL-------WLPGMDHAGIATQNKVEQQL------------------------ 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +      +   + +   V  +  +   +I+   L+ L    D          G    +
Sbjct: 109 -AEEGKSRHDLGRDAFTERVWQWKDEYGGRILGQ-LRRLGAGLDWSRERFTMDEGLSRAV 166

Query: 274 RDIIDNLARQGYVYEG 289
           + I  NL     +Y  
Sbjct: 167 QTIFKNLYDDELIYRA 182


>gi|163839798|ref|YP_001624203.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953274|gb|ABY22789.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 529

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 105/325 (32%), Gaps = 35/325 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL------------ 179
           P G  H+GH    V  D LA      G++V      ++ G ++   A             
Sbjct: 19  PNGVPHIGHAYEYVSADALARFKRLDGFDVFYMSGTDEHGIKVQQAAEKEGVTPLELVDR 78

Query: 180 -SVFWRYQQALYNNDSD------LPEGYYPGVYL----KHVGKELADKYSSELLNFPEEK 228
            S   R    L  +  D       PE Y     L    +  G    DKY+       E  
Sbjct: 79  NSAAIRAVHDLVESSYDRFIRTTEPEHYLASQELWRRMEANGDIYLDKYTGWYSVRDEAY 138

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +     +     +   I  + +    + + +      ++     + +     A   Y + 
Sbjct: 139 YTDEQTELRADGIRYAIETETEVTWTEEESYFFRLSNYQEKLLALYEAQPEFAAPQYRFN 198

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCK 344
            ++   KS   Q   + R    +   + G+D     +  D    Y       D +  + K
Sbjct: 199 EVISFVKS-GLQDLSISRTSFNWGVPVPGNDKHVMYVWVDALTNYLTGAGFPDESSSQWK 257

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           Y    D  ++++G D    + R  A+        A + +    ++  +     +KMSK  
Sbjct: 258 Y-WPAD--VHIIGKD----ISRFHAIFWPGFLMSAGLPLPKRVMIHGFLFNNGVKMSKSF 310

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +     V   G D+VRF  L  
Sbjct: 311 GNVVAPADWVAAYGVDAVRFFFLRE 335


>gi|70607261|ref|YP_256131.1| glutamyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363435|sp|Q4J8P2|SYE_SULAC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|68567909|gb|AAY80838.1| glutamyl- and glutaminyl-tRNA synthetases [Sulfolobus
           acidocaldarius DSM 639]
          Length = 567

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 106/354 (29%), Gaps = 64/354 (18%)

Query: 59  LDPLTIAELIVAR---IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115
            D + IA+ +V     + ++     +              S   ++L             
Sbjct: 45  KDIVEIAKELVNYVNSLDVESQKKELE-------------SKFPEMLEEKKREKESKKEL 91

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                + V +   + NP GP+H+G+ R A++    A +                      
Sbjct: 92  PDIPVSGVLVTRFAPNPDGPLHLGNARAAIISHEYARIYN-------------------G 132

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              L    R+          +PE Y    ++K   K L  K     L       L    +
Sbjct: 133 KFIL----RFDDTDPKTKKPIPEAY---DWIKEDLKWLGIK---WDLEVRASARLETYYN 182

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-------DPSPIRDIIDNLARQGYVYE 288
           ++   + K        +++  +    E    R         P    ++ + +   G   E
Sbjct: 183 FARILLSKG----YAYIDLCKEAEFKERRSKREACPHRETSPESNLELFEKMI-HGEFEE 237

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
           G          +  D  ++  +    +       P ++ D  + +   + A     Y+ G
Sbjct: 238 GKAVVRLKTDLKLPDPSQRDWVLLRVINVKKSPHP-IEGDKYWVWPTYNFASAIDDYDLG 296

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             ++    G +H+   ++ + +   +  K   +     E  RL  +G  +  SK
Sbjct: 297 VTHI--FRGKEHAVNAEKQKWIYNYMGWKYPYVR----EFGRLKLEGFMMSKSK 344


>gi|254247426|ref|ZP_04940747.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872202|gb|EAY63918.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|194334635|ref|YP_002016495.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312453|gb|ACF46848.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 902

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 72/240 (30%), Gaps = 33/240 (13%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +      S+ +   E  R   G      +     N TG + +GH     + D        
Sbjct: 23  WSSAHWESLGIYEAESARVTEGGKEPYTVLMPPPNVTGSLTLGHVLNHTLQD-------- 74

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                                   +F RYQ+        LP   + G+  + V ++   K
Sbjct: 75  ------------------------IFIRYQRMQGKEALWLPGTDHAGIATQTVVEKKLRK 110

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                 +   +++L  V  +       +I   L+ L I  D   +           ++  
Sbjct: 111 EGISRHDLGRKEFLDHVWQWR-DEYGGLILRQLRKLGISCDWRRNLFTMDESASMAVKHA 169

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              L R G +Y G         +Q    D + ++ + T     V  PL+K  G Y   A 
Sbjct: 170 FVTLYRDGLIYRGKRIINWCPVSQTALSDEEVIMKQRTDKLVYVRYPLVKRPGEYITIAT 229


>gi|320162142|ref|YP_004175367.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995996|dbj|BAJ64767.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 902

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 335 AADLAYFKCK--YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF      E G+D +          +      +   +     ++      L  L 
Sbjct: 479 TPDLRYFYPTSVLETGYDIL----------FFWVARMIMMGLEF-TGEVPFHTVYLHGLI 527

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           RD    KMSK  G+ +    V++E+G+D++RF +L        D +    K ++  N
Sbjct: 528 RDEHGQKMSKSKGNVVDPLIVMNEMGTDALRFTLLVGSTPGN-DVNLSLKKVEANRN 583


>gi|154503892|ref|ZP_02040952.1| hypothetical protein RUMGNA_01718 [Ruminococcus gnavus ATCC 29149]
 gi|153795491|gb|EDN77911.1| hypothetical protein RUMGNA_01718 [Ruminococcus gnavus ATCC 29149]
          Length = 223

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 21/213 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTLALSVFWRYQQ 187
           + +PTG MHVG+ R A+    +A      G +        D    +   L +      + 
Sbjct: 14  APSPTGRMHVGNLRTALYAYLIA---KHEGGDFILRIEDTDQERFMEGALDIIYRTLEKT 70

Query: 188 ALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            L +++    +G Y G Y++       +  KY+ +L+   +  +        + ++   +
Sbjct: 71  GLIHDEGPDKDGGY-GPYVQSERNASGVYLKYAKQLVEQGD-AYYCFCDKARLDSLKTSV 128

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +D   + +     +             ++ ++     G  +   L  P   TT   D  
Sbjct: 129 SEDGTDIVVYDKHCLGLS----------KEEVEANLAAGKPWVIRLNVPNEGTTTFHDEI 178

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
              +   +  +    D  L+KSDG  TY  A++
Sbjct: 179 YGDITVPNAELD---DMILIKSDGFPTYNFANV 208


>gi|172061472|ref|YP_001809124.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254782374|sp|B1YVA4|SYI_BURA4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171993989|gb|ACB64908.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|15889997|ref|NP_355678.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|32171574|sp|Q8UBV2|SYL_AGRT5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15157966|gb|AAK88463.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 876

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFVTDNSDPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 68  RARGFNV 74


>gi|260891332|ref|ZP_05902595.1| leucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858715|gb|EEX73215.1| leucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 892

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         +    N +       +  + A P+G +HVGH R   +GD +A      G+
Sbjct: 13  KWQDKWFEEDVFKSENKVEGKENYYVLEMFAYPSGKLHVGHLRNYAIGDAIARYKKMKGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|157149888|ref|YP_001450809.1| methionyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074682|gb|ABV09365.1| methionine-tRNA ligase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 666

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 108/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVTGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 171 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 230

Query: 349 FDNMIYVM-GS-------------DHSGYVKRLEA-VAAAVSEKKAQINVLLCELVRLYR 393
             +++YV   +             DH+ Y K     V   V +   + + +   ++ +  
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQDDHANYDKFWNGTVFQMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DIKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 339


>gi|126137401|ref|XP_001385224.1| valyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126092446|gb|ABN67195.1| valyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 1051

 Score = 41.8 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 48/195 (24%), Gaps = 32/195 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+        +          I       I     N TG +H+GH     + D L     
Sbjct: 106 SWYSWWDKEGLFQPELTADGNIKPQGAFTIPAPPPNVTGALHIGHALTVSIQDALIRYYR 165

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W  ++   ++        Y          E  +
Sbjct: 166 MKGKTTLFLPGFDHAGIATQSVVEKQIWAKEKKTRHD--------YGREKFVEKVWEWKE 217

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y S                         I++  K L   +D        +    + + +
Sbjct: 218 EYHSR------------------------IKNQFKKLGASYDWTREAFTLNPDLSAAVTE 253

Query: 276 IIDNLARQGYVYEGI 290
               +   G +Y   
Sbjct: 254 AFVRMHDDGTIYRAT 268


>gi|329769394|ref|ZP_08260807.1| leucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838964|gb|EGF88555.1| leucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 809

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLY--RDGMPIKMSKRA 404
           +Y+ G++H+     Y +    V   +    ++     L  + + L   +DG P KMSK  
Sbjct: 526 VYIGGAEHAVLHLLYARFWHKVLYDLGLVPSREPFQKLFNQGMILAEGKDGRPEKMSKSK 585

Query: 405 GDFITLRHVVDEVGSDSVRFMML 427
           G+ +    ++   G+D++R   +
Sbjct: 586 GNVVNPDDIIVSHGADTLRVYEM 608


>gi|325292849|ref|YP_004278713.1| methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060702|gb|ADY64393.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 516

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 103/328 (31%), Gaps = 41/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     ++    
Sbjct: 16  PNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQTARAEGISPEELAQR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N     E           +++   +   +   +      +   +             +A 
Sbjct: 76  NSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKDSYAGWYSVRDEAY 135

Query: 242 MKIIRDDLKALNIQH-----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                 +++A  +++      +   E++ +    S  +D +  L  +   + G     ++
Sbjct: 136 YGEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQDKLLKLYEENPDFIGP-AERRN 194

Query: 297 KTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
           +         K L    T          D      +  D    Y  A   Y + K     
Sbjct: 195 EIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYITA-TGYIEDKNGPRA 253

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                D  ++++G D    + R  AV   A  +S K      +      L +     KMS
Sbjct: 254 KYWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG---EKMS 304

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +   ++V+  G D VR+  +  
Sbjct: 305 KSLGNVVDPVNLVNHFGLDQVRYFFMRE 332


>gi|315655136|ref|ZP_07908038.1| valyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315490617|gb|EFU80240.1| valyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 885

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 18/124 (14%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++  SD+VR+     +      FD  ++K   +      
Sbjct: 593 DPDHKKMSKSKGNVVTPMGLLEKHSSDAVRYWAASARLGTDAAFDEGEMKVGRRL----- 647

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +  + A  +  D D  L P  V  +          LI  LA    VI +AT
Sbjct: 648 ----AIKLLNASKFALSMGGDADLVLDPALVTVEVD------RSLIATLA---EVITSAT 694

Query: 514 IAQE 517
            A E
Sbjct: 695 KAFE 698


>gi|312149265|gb|ADQ29336.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 480

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 62/338 (18%), Positives = 113/338 (33%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+                   GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKGYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   I V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDIFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++ N +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFY 340


>gi|300173956|ref|YP_003773122.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888335|emb|CBL92303.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 894

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 57/214 (26%), Gaps = 35/214 (16%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +     I     N TG +H+GH     + D +       G +V            ++  
Sbjct: 40  NEPEPYAIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGMDVL-------WLPGMDHA 92

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
            ++   + +Q L                                 +   EK++  V D+ 
Sbjct: 93  GIATQAKVEQRLRAEGIS-------------------------RYDLGREKFVEQVWDWK 127

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                  I+     + +  D          G    +  +  +L ++G +Y G        
Sbjct: 128 -NEYAATIKKQWGKMGLSLDFDRERFTLDDGLNKAVNKVFIDLYKKGLIYRGEYIINWDP 186

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +    D +  +      G         +DG+ 
Sbjct: 187 QARTALSDIE--VIYQDDEGAFYHVKYPFTDGTT 218



 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 44/240 (18%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337
            Q  +Y G   P      +  D+        L   STM   D      K+D    Y    
Sbjct: 437 DQEEIYVGTDEPEGEGWQRDPDVLDTWFSSALWPFSTMGWPDN-----KADDFAKY---- 487

Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
             Y       G+D +I+         V R+       + ++   NVL+  L+   RDG  
Sbjct: 488 --YPTNTLVTGYD-IIFFW-------VARMMFQGKEFTGQRPFKNVLIHGLI---RDGEG 534

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQY 456
            KMSK  G+ +    V+++ G+D++R+ +       + + F + K+              
Sbjct: 535 RKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKMDA------------ 582

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           A+     I       +  ++ D    + +P   +   S+  +   L+     IE+ T   
Sbjct: 583 AWNFINKI--WNASRYVIMNLDEKTPSTLPDLDKLSLSDKWI---LSRLNTTIEDVTRNF 637


>gi|295093886|emb|CBK82977.1| glutamyl-tRNA synthetase, bacterial family [Coprococcus sp.
           ART55/1]
          Length = 558

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 103/311 (33%), Gaps = 39/311 (12%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL------MAFSGYEV 161
             +E             +   + +PTG MH+G    A++   LA        +     + 
Sbjct: 19  DDLEKRFPERDLPEGARVTRFAPSPTGYMHIGGLYAAMISRKLAKQSGGVFYLRIEDTDR 78

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            RE  + D   +I          + +  +     +  G Y     K + +    K   E 
Sbjct: 79  KRE--LEDGVNEIINSLKKFDLGFDEGPFEGGETIY-GPYKQSERKEIYQTCVKKLMQEG 135

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
             +P         D++    +  IR   +A  +    +    ++  G       I + LA
Sbjct: 136 YAYP---------DFTTAEELDEIRAKQEAAKVDIGYYG---EYAVGRNLTYEQIEEKLA 183

Query: 282 R-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA---- 336
             + YV     P    KT    D  R ++     +    +D  LLKSDG  TY  A    
Sbjct: 184 AGEPYVVRLKSPGEAGKTVIYSDPIRGKIEMPENI----MDVVLLKSDGIPTYHFAHAVD 239

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D         RG + +     + +  + K+L  +      K A I  ++   V +  +G 
Sbjct: 240 DHFMRTNLVIRGDEWL-----ASYPLH-KQLFDLCGFALPKYAHIAPIMKLEVTVDEEGE 293

Query: 397 PI---KMSKRA 404
                K+SKR 
Sbjct: 294 HQRKRKLSKRK 304


>gi|291461006|ref|ZP_06026392.2| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379583|gb|EFE87101.1| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 862

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    + +       +  +   P+G +HVGH R   +GD ++      GY
Sbjct: 15  KWQEKWAKDNIFKTEDEVAGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGY 74

Query: 160 EV 161
            V
Sbjct: 75  NV 76


>gi|255994163|ref|ZP_05427298.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993831|gb|EEU03920.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 817

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 4/72 (5%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N         K                  K     +E     P+G +H+GH R   +GD 
Sbjct: 6   NF---KEIEEKWQKKWQDDKSFKAEIDKNKKKYYVLEMF-PYPSGKLHMGHVRNYAIGDA 61

Query: 150 LASLMAFSGYEV 161
           +A   +  G+ V
Sbjct: 62  IARYKSLKGFNV 73


>gi|254702616|ref|ZP_05164444.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261753200|ref|ZP_05996909.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261742953|gb|EEY30879.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|170733873|ref|YP_001765820.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254782375|sp|B1JXC3|SYI_BURCC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169817115|gb|ACA91698.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ I    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|90421007|ref|ZP_01228911.1| leucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334785|gb|EAS48561.1| leucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 872

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P        +       +       G K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRASEPRWQTAWNEAKLFETQTDAPGEKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYRRAKGFNV 74


>gi|329768427|ref|ZP_08259919.1| leucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836989|gb|EGF86634.1| leucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 809

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLY--RDGMPIKMSKRA 404
           +Y+ G++H+     Y +    V   +    ++     L  + + L   +DG P KMSK  
Sbjct: 526 VYIGGAEHAVLHLLYARFWHKVLYDLGLVPSREPFQKLFNQGMILAEGKDGRPEKMSKSK 585

Query: 405 GDFITLRHVVDEVGSDSVRFMML 427
           G+ +    ++   G+D++R   +
Sbjct: 586 GNVVNPDDIIVSHGADTLRVYEM 608


>gi|325957776|ref|YP_004289242.1| leucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329208|gb|ADZ08270.1| leucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 958

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 12/161 (7%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
              V       ++      KV +      P+G MHVGH R   V D  A      GY V 
Sbjct: 10  WQRVWQESNLFQSDPNNKKKVYVTVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVL 69

Query: 163 --REYYINDAGAQINTLALSVFWR-------YQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               +++   GA +  +A  +  +       Y+      +S+L +   P   +K+ G+E 
Sbjct: 70  FPMGWHV--TGAPVVGIAKRIQRQDPWTIDIYKNIHKVPESELAKFTDPEYIVKYFGEEY 127

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
            D  +    +    +    + D   Q  ++     LK + +
Sbjct: 128 HDVMTRMGYSIDWRREFKTL-DPHYQKFIEWQFRKLKNMGL 167



 Score = 37.6 bits (86), Expect = 6.0,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 21/230 (9%)

Query: 217 YSSELLNFPEEKWLPIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG--DPSP 272
                L + +E+W  +      S+  + + IR + K        +        G   P  
Sbjct: 446 EDQWFLKYSDEEWKELTYQCLESMNIIPEEIRANFKYYIGWLQDWACSRRIGLGTKLPWN 505

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
              +I+ L+                +    D++ +   F    +    D+  +K D   T
Sbjct: 506 TDWLIEPLSDSTIYMAYYTIAKYMNSIDPEDLNDE--FFDEVFLDIKSDKSSVKIDSELT 563

Query: 333 YFAADLAYFKCKYERGFDNMI---YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
               D    +  Y    D  +    ++G+            A    +K  Q  V+    +
Sbjct: 564 KQMRD----EFNYWYPLDWRLSAKDLVGN--HLSFHMFHHSAIFPRDKWPQGIVVFGMGL 617

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
                    KMS   G+ I L   ++  GSD +R + L        DFD+
Sbjct: 618 LEGN-----KMSSSKGNIIMLEDAINTYGSDVIR-LFLMSSAEPWQDFDW 661


>gi|325000617|ref|ZP_08121729.1| valyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 878

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 24/154 (15%)

Query: 355 VMGSDHSGYVKRLEAVAA---AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           V G D   +   +  +     A+ E   +   L      L RD    KMSK  G+ I   
Sbjct: 486 VTGYD-ILFFWVVRMMMFGTYAMGETPFRDVYLHG----LIRDEHGKKMSKSKGNVIDPL 540

Query: 412 HVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
            ++++ G+D++RF +    N    +      V                 +  +I R A  
Sbjct: 541 DLMEDYGADALRFTIARGSNPGTDMSLSPEWVAASRNFTT---------KLWNITRFALS 591

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
              D      P   +P E++   ++  ++  LAE
Sbjct: 592 KGAD------PHLPLPAEADRTDADRWILGRLAE 619


>gi|320547307|ref|ZP_08041598.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448005|gb|EFW88757.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 666

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 110/349 (31%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       Y+V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  ++L+   +K++    DY  + + ++    L  
Sbjct: 66  -------GITPQAYVDGMAADVKKLW--KMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLA------YFKCKYERG 348
              R     D            ++ DG               DLA       +  K    
Sbjct: 171 YFLRLGKYADRLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSN 230

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G     +    +     V   V +   + + +   ++ +  
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPIMLMML 290

Query: 394 DGM--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DMKLPERLIAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 339


>gi|260568476|ref|ZP_05838945.1| isoleucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260155141|gb|EEW90222.1| isoleucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|121595217|ref|YP_987113.1| valyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607297|gb|ABM43037.1| valyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 976

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 82/289 (28%), Gaps = 54/289 (18%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIV----------VSGIEYGRNLIGKGTKVNIEFVSANP 132
           I   G +N  LS S+    L +            V+G               I+    N 
Sbjct: 26  IEQPG-LN-SLSKSFEPAALEAHWGPEWEKRGYGVAGYRGTGAARAGQPAFAIQLPPPNV 83

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +H+GH     + D+L       G+        + AG  I T  +      +Q +  +
Sbjct: 84  TGTLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAG--IATQIVVERQLQEQGVSRH 141

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D   P       ++K V  E  +K                            I   ++ L
Sbjct: 142 DLGRP------DFVKKV-WEWKEKSG------------------------NTITTQMRRL 170

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDM 304
               D               + D    L +QG +Y G         L    S    + + 
Sbjct: 171 GDSVDWSREYFTMDDKLSKVVTDTFVKLYQQGLIYRGKRLVNWDPKLQSAVSDLEVENEE 230

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
               L   +  + D   + ++ +         D+A      +  + ++I
Sbjct: 231 KDGSLWHIAYPLADGSGQLVVATT-RPETMLGDVAVMVHPEDERYAHLI 278


>gi|62317149|ref|YP_223002.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|83269132|ref|YP_418423.1| isoleucyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189022408|ref|YP_001932149.1| isoleucyl-tRNA synthetase [Brucella abortus S19]
 gi|225628663|ref|ZP_03786697.1| isoleucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237816708|ref|ZP_04595700.1| isoleucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254691368|ref|ZP_05154622.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254698428|ref|ZP_05160256.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254706253|ref|ZP_05168081.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254711453|ref|ZP_05173264.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254712056|ref|ZP_05173867.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254731875|ref|ZP_05190453.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256029916|ref|ZP_05443530.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256158085|ref|ZP_05456003.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256252960|ref|ZP_05458496.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256256553|ref|ZP_05462089.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260166982|ref|ZP_05753793.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260544382|ref|ZP_05820203.1| isoleucyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260756980|ref|ZP_05869328.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260759646|ref|ZP_05871994.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762889|ref|ZP_05875221.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882791|ref|ZP_05894405.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261220053|ref|ZP_05934334.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261313696|ref|ZP_05952893.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261319062|ref|ZP_05958259.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261319701|ref|ZP_05958898.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261756369|ref|ZP_06000078.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265986934|ref|ZP_06099491.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265996600|ref|ZP_06109157.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|297249909|ref|ZP_06933610.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|88942111|sp|P0C124|SYI_BRUA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|90102026|sp|P0C123|SYI_BRUAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|62197342|gb|AAX75641.1| IleS, isoleucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82939406|emb|CAJ12360.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Isoleucyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189020982|gb|ACD73703.1| isoleucyl-tRNA synthetase [Brucella abortus S19]
 gi|225616509|gb|EEH13557.1| isoleucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237787521|gb|EEP61737.1| isoleucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260097653|gb|EEW81527.1| isoleucyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260669964|gb|EEX56904.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260673310|gb|EEX60131.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677088|gb|EEX63909.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872319|gb|EEX79388.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260918637|gb|EEX85290.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261292391|gb|EEX95887.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261298285|gb|EEY01782.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261302722|gb|EEY06219.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261736353|gb|EEY24349.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262550897|gb|EEZ07058.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264659131|gb|EEZ29392.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|297173778|gb|EFH33142.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|221633077|ref|YP_002522302.1| isoleucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156780|gb|ACM05907.1| isoleucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 1059

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 25/181 (13%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-- 448
           L RD    +M K  G+ I      +  G D +R++ L    ++ L+F +  + E  +   
Sbjct: 588 LLRDEKGEEMHKSKGNAIWFDEAAERAGVDVMRWLYLKHNPAQNLNFGWRLLDEVRRTFL 647

Query: 449 -----NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                +  F+  YA       F  A+   P  +  L  R ++ +  +   +  +    + 
Sbjct: 648 LPLWNSYAFFANYARL---DGFHPAQHDVPLGERTLLDRWILARLQQVIATVRE---RIQ 701

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
           +Y  +  NA  A + + +     DL++     +   R N R  +   +++      L L 
Sbjct: 702 DYDSM--NAARALQDFVV----EDLSN----WY--IRRNRRRFWKTESDQDKAAAYLTLY 749

Query: 564 H 564
            
Sbjct: 750 E 750


>gi|220935447|ref|YP_002514346.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782842|sp|B8GV13|SYL_THISH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219996757|gb|ACL73359.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 817

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 36/192 (18%)

Query: 354 YVMGSDHS----GYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           Y+ G +H+     Y +    +     + +       LL + + L +DG   KMSK  G+ 
Sbjct: 528 YIGGIEHAVLHLLYARFFHKLMRDEGLVDGDEPFTRLLTQGMVL-KDGA--KMSKSKGNT 584

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSEL-LDFD--------------FCKVKEQSKENPVF 452
           +    +++  G+D+VR  M++    EL L++               + +V +  +     
Sbjct: 585 VDPEALIERYGADTVRLFMMFAAPPELSLEWSDSGVEGAYRFLKRLWKQVHDHVQGGAAP 644

Query: 453 YVQYAYARC--RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR--- 507
            +  A      +++ R+       +  D+  R           + ++L+  L  +     
Sbjct: 645 ALDKAALNADQQALRRKLHQTLAKVSDDIGRRTTFNTAI---AACMELMNELGRFEDKSG 701

Query: 508 ----VIENATIA 515
               V++ A   
Sbjct: 702 QGRAVMQEALET 713



 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L +   +       +       G       +   P+G +H+GH R   +GD ++   
Sbjct: 7   PDALERQAQTWWDEHQTFRAREDAPGEPFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMQGRNV 73


>gi|168023212|ref|XP_001764132.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684572|gb|EDQ70973.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 640

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 11/142 (7%)

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           ERG+   ++++G D    + R  AV   A  +S        +      L +DG  +KM K
Sbjct: 334 ERGWPASVHIIGKD----ILRFHAVYWPAMLMSADLPLPEAVFGHGF-LTKDG--LKMGK 386

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
             G+ I  R +V + G DSVR+  L   +  +  DF   +  E    N    +     R 
Sbjct: 387 SLGNTIEPRELVSKFGPDSVRYYFLKEIEFGKDGDFSEKRFIEIVNANLANTIGNLLNRT 446

Query: 462 RSIFRQAKDIFPDLDFDLFPRN 483
             + ++  D    +D       
Sbjct: 447 LGLLKKNCDAVIPVDSSSISEE 468


>gi|163734313|ref|ZP_02141753.1| leucyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161392321|gb|EDQ16650.1| leucyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 883

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +   + +        K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 46  ARWQKAWTENEVFKAVRSADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKLATG 104

Query: 159 YEV 161
           + V
Sbjct: 105 HNV 107


>gi|77461073|ref|YP_350580.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123730904|sp|Q3K6L5|SYI_PSEPF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77385076|gb|ABA76589.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 943

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 76/235 (32%), Gaps = 29/235 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------G 329
              G ++   +   + +  ++ +++  +  F+   + ++GD+  +    SD        G
Sbjct: 483 KESGELHPRTVELME-EVAKRVEVEGIEAWFKLDAAELLGDEAPQYDKISDTLDVWFDSG 541

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  +           +E G    +Y+ GSD   G+         A+        +L    
Sbjct: 542 TTHWHVLR-GSHPMGHETGPRADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRELLTHGF 600

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                D    KMSK  G+ I  + V D +G        + R      D+       +   
Sbjct: 601 ---TVDESGRKMSKSLGNVIAPQKVNDTLG------ADIMRLWVASTDYSGEMAVSEQ-- 649

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                +Q +    R I   A+ +  +L       +++P E         +   L 
Sbjct: 650 ----ILQRSADAYRRIRNTARFLLSNLTGFNPATDLLPAEDMLALDRWAVDRTLL 700


>gi|15605172|ref|NP_219958.1| glutamyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789180|ref|YP_328266.1| glutamyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237802873|ref|YP_002888067.1| glutamyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804795|ref|YP_002888949.1| glutamyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311255|ref|ZP_05353825.1| glutamyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317557|ref|ZP_05358803.1| glutamyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6686006|sp|O84451|SYE_CHLTR RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|115305761|sp|Q3KLQ4|SYE_CHLTA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|3328877|gb|AAC68044.1| Glutamyl-tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167710|gb|AAX50718.1| glutamyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273095|emb|CAX10008.1| glutamyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274107|emb|CAX10901.1| glutamyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296435971|gb|ADH18145.1| glutamyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436898|gb|ADH19068.1| glutamyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437832|gb|ADH19993.1| glutamyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140332|gb|ADH97090.1| glutamyl-tRNA synthetase [Chlamydia trachomatis G/9301]
 gi|297748576|gb|ADI51122.1| Glutamyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749456|gb|ADI52134.1| Glutamyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 506

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 93/277 (33%), Gaps = 28/277 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           V+ +PTG  HVG    A+  +  A    ++G  + R    +   ++ +  A         
Sbjct: 10  VAPSPTGDPHVGTAYMALFNEVFAR--KYNGQMILRIEDTDQTRSRDDYEANIFSALKWC 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +  ++     G Y G Y +    E+  KY+  LL                         
Sbjct: 68  GIRWDEGPDVGGAY-GPYRQSERTEIYKKYAEILLQTD------------CAYKCFATPQ 114

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L+ +            + R       + +     QG  Y   L  P +  +   D  + 
Sbjct: 115 ELQEMRAVASTLGYRGGYDRRYRYLSPEEVRQREEQGQPYTIRLKVPLTGESVFEDQCKG 174

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            ++F      D  D+ L+KSDG  TY  A++      +  G  +++   G +      + 
Sbjct: 175 CVVFP---WADVDDQVLVKSDGFPTYHFANV---VDDHLMGITHVLR--GEEWLSSTPKH 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +  A   +  Q        + L  DG   K+SKR 
Sbjct: 227 LLLYEAFGWEPPQF---FHMPLLLNPDG--SKLSKRK 258


>gi|115352610|ref|YP_774449.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322419|sp|Q0BCK8|SYI_BURCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115282598|gb|ABI88115.1| Isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D DF      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDFAQHAVPV-DEWLEIDRYAVA 710


>gi|333027111|ref|ZP_08455175.1| putative valyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332746963|gb|EGJ77404.1| putative valyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 44/268 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 20  TPADVEGPLYERWVERGYFEADAKSEKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRR 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E             ++   ++   + +Q L                        
Sbjct: 80  KRMQGFETL-------WQPGMDHAGIATQNKVEQQLAGE--------------------- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V  +  +     I   ++ L    D          G    +
Sbjct: 112 ----GKSRHDLGREAFIARVWQWK-EEFGGKILGQMRRLGDGVDWSRERFTMDEGLSQAV 166

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           + I   L     +Y                S    +   D  +L+  S   GD  +  ++
Sbjct: 167 QTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDDDGELV--SMRYGDGDESIVV 224

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  + T    D A      +  + ++I
Sbjct: 225 ATTRAET-MLGDTAVAVHPDDERYRHLI 251


>gi|323141171|ref|ZP_08076072.1| glutamate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322414314|gb|EFY05132.1| glutamate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 489

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 92/290 (31%), Gaps = 42/290 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R     D+ +QI     S+ 
Sbjct: 9   APSPTGYLHIGGARTALFNWLFARKMGGKLILRIEDTDIERLK--EDSVSQI---LTSLK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         ++    G   G Y +    ++  KY+ +LL+  +  +        + A  
Sbjct: 64  WLGINWDEGPEA----GGEYGPYYQSERFDIYKKYAQQLLDEGK-AYYCFCTTEDLAAQR 118

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  R   +              + R       +        G  Y   +  P   +    
Sbjct: 119 EKQRAAKQPFR-----------YARTCRDIPAEEAKARIAAGEPYSIRIKIPAEGSITVH 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+   ++ F      D     ++KS+G  TY  A         +     M +V+ ++   
Sbjct: 168 DLIHGEVTFNMDQFDDF---VIVKSNGIPTYNFAVC------VDDHLMGMTHVLRAEEHL 218

Query: 363 Y-VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
               +   V  A+  +  +   +   L          K+SKR G      
Sbjct: 219 SNTPKQLLVYEALGWEPPKFGHMPMILAMD-----RSKLSKRHGATSVEE 263


>gi|254699492|ref|ZP_05161320.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261749947|ref|ZP_05993656.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261739700|gb|EEY27626.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|149201526|ref|ZP_01878500.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144574|gb|EDM32603.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 895

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  S+   + +   R    +     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQSAWEAADVFRARRDETRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYKIATG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|31432951|gb|AAP54522.1| Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group]
 gi|62733612|gb|AAX95729.1| valyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 1056

 Score = 41.8 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K   S   S   +  +         I     N TG +H+GH     + D +   
Sbjct: 89  NPAAVEKSWYSWWESSQYFVADATSSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRW 148

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +    ++                     
Sbjct: 149 RRMSGYNALWVPGMDHAGIATQVVVEKRLMRDRNLSRHDLGR------------------ 190

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  E+L + ++    I+K              L+ L    D               +
Sbjct: 191 -DKFLLEVLQWKDQHGGTILKQ-------------LRTLGASLDWSRECFTMDEKRSKAV 236

Query: 274 RDIIDNLARQGYVYEG 289
            +    L ++G +Y  
Sbjct: 237 TEAFIRLHKEGLIYRD 252


>gi|322392166|ref|ZP_08065628.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145066|gb|EFX40465.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 665

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 106/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V                 L    +  Q    
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDV------------FYLTGLDEHGQKIQQKAE 62

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + +I    L  
Sbjct: 63  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQIFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERGFD---- 350
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDRLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVQVPSN 229

Query: 351 --NMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G     +    +     V   V +   + + +   ++ +  
Sbjct: 230 PRHVVYVWFDALLNYVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 290 DIKLPERLIGHGWFVMKDGKMSKSKGNVIYPEMLVERYGLDPLRYYLMR 338


>gi|317180884|dbj|BAJ58670.1| valyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 872

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 99/317 (31%), Gaps = 52/317 (16%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K  +  +     N TG +H+GH     + D LA      GY+   +  ++ AG  I T  
Sbjct: 38  KNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRST-------------MVGDDVDRPLLKSDGSYTYFAADL- 338
               K        R + LF  +             +VG  V  PL           ADL 
Sbjct: 209 LENQKDYLVVATTRPETLFGDSAIMVNPNDERYKHLVGQKVILPLTH---RTIPIIADLH 265

Query: 339 -------AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                     K      F++  Y +G  H          A  + ++K  +N    E   L
Sbjct: 266 VEMEFGTGCVKVTPTHDFND--YEVGKRHHL-------EAIKIFDEKGILNAHCGEFENL 316

Query: 392 ----YRDGMPIKMSKRA 404
                RD +  K+ + A
Sbjct: 317 ERLEARDKVVEKLKENA 333


>gi|260220670|emb|CBA28450.1| Valyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 960

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 58/202 (28%), Gaps = 45/202 (22%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG--AQINT 176
           +G   +I+    N TG +H+GH     + D+L      +G+        + AG   QI  
Sbjct: 44  QGKNFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMAGFNTAWIPGTDHAGIATQI-- 101

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               V  R  Q    +  DL                              E +   V ++
Sbjct: 102 ----VVERQLQEQKVSRHDL----------------------------GREAFTKKVWEW 129

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG------- 289
             ++    I   ++ +    D               + +    L  QG +Y G       
Sbjct: 130 KEKSG-NTITTQMRRMGDSVDWSREYFTMDPKLSQTVTETFVQLYEQGLIYRGKRLVNWD 188

Query: 290 -ILPPPKSKTTQKCDMDRKQLL 310
            IL    S    + + +   L 
Sbjct: 189 PILMSAVSDLEVESEEEDGSLW 210


>gi|156740388|ref|YP_001430517.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231716|gb|ABU56499.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 907

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 12/104 (11%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            E G+D +++         V R+  +   ++ +     V L  LV   RD    KMSK  
Sbjct: 501 METGYD-ILFFW-------VARMMMMGCYLTGEPPFHTVYLHGLV---RDKDGRKMSKTY 549

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK 447
           G+ +    V+D+ G+D++RF +    +  + L+ +  +++    
Sbjct: 550 GNVVNPLDVIDQYGADALRFTLATSSSPGQDLNLNPERIESARN 593


>gi|116332758|ref|YP_794285.1| glutamyl- and glutaminyl-tRNA synthetase [Lactobacillus brevis ATCC
           367]
 gi|122270549|sp|Q03U68|SYE1_LACBA RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|116098105|gb|ABJ63254.1| glutamyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 503

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 102/291 (35%), Gaps = 43/291 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-EYYINDAGAQINTLALSV 181
           + +PTG +H+G+ + A+     A       ++     +V R   +  D  +QI+ L    
Sbjct: 16  APSPTGFLHIGNAQSALFNYLFARHYHGTMVLRIEDTDVKRNVPHGED--SQIDNL---- 69

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W         D   P+      Y +   ++L  +Y ++LL+          KDY+ +  
Sbjct: 70  HWLGIDWDEGPDKPNPK---YAPYHQTERQDLYHRYITQLLDQGL-----AYKDYATEDE 121

Query: 242 MKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           +  +RD  +A      +D             +           +G      L  P +   
Sbjct: 122 LTTMRDQQRAAGEAPHYDGRWYGRSVADQQAA---------EARGLKPSIRLHLPANHEY 172

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D+ +  + F S  +G D    + KS+G  TY   + A     Y     +++   G D
Sbjct: 173 AWDDIIKGHVAFNSDNMGGDF--IIEKSNGMPTY---NFAVVIDDYLMDITDVLR--GDD 225

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           H     +  AV  A+  K      +      +Y      K+SKR  + +  
Sbjct: 226 HIANTPKQIAVYEALGLKHPNFGHI----TLIYNPKTRKKLSKRDKETLQF 272


>gi|312143927|ref|YP_003995373.1| isoleucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904578|gb|ADQ15019.1| isoleucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 931

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 353 IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           IY+ G+D   G+       A A   +     V+         D   IKMSK  G+ ++  
Sbjct: 559 IYLEGTDQYRGWFNSSLLTAVATEGRAPYNEVITNGF---TVDDKGIKMSKSQGNVVSPH 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D+ G+D +R  +        +      +K+ S+          Y R R+ +R     
Sbjct: 616 KVIDQYGADILRLWVASSDFKNDVKVSDNILKQNSE---------VYRRIRNTYRFVLGN 666

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
             D D +   +N I  E   +     +++ L +  + +  A    E +++
Sbjct: 667 VSDFDIE---KNYIKYEDRKELDRW-IMIRLQDLIKKVTKAYEKYEYHRV 712


>gi|310778463|ref|YP_003966796.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 931

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 11/120 (9%)

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           +   +R  D  +Y+ GSD   G+ +     +   +       VL    V    DG   KM
Sbjct: 549 RENLKRPAD--LYLEGSDQHRGWFQTSLLTSIGSTGDAPYKQVLTHGFVN---DGEGKKM 603

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK-----ENPVFYVQ 455
           SK  G+ ++   V+   G+D +R         E +      +K+ ++      N   Y+ 
Sbjct: 604 SKSTGNVMSPDDVIKTYGADILRLWCASVDYREDVKISENILKQMAEAYRRVRNTARYIL 663


>gi|302519062|ref|ZP_07271404.1| valyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427957|gb|EFK99772.1| valyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 44/268 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 20  TPADVEGPLYERWVERGYFEADAKSEKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRR 79

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E             ++   ++   + +Q L                        
Sbjct: 80  KRMQGFETL-------WQPGMDHAGIATQNKVEQQLAGE--------------------- 111

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +   E ++  V  +  +     I   ++ L    D          G    +
Sbjct: 112 ----GKSRHDLGREAFIARVWQWK-EEFGGKILGQMRRLGDGVDWSRERFTMDEGLSQAV 166

Query: 274 RDIIDNLARQGYVYEGILP--------PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           + I   L     +Y                S    +   D  +L+  S   GD  +  ++
Sbjct: 167 QTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDDDGELV--SMRYGDGDESIVV 224

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  + T    D A      +  + ++I
Sbjct: 225 ATTRAET-MLGDTAVAVHPDDERYRHLI 251


>gi|302338408|ref|YP_003803614.1| isoleucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635593|gb|ADK81020.1| isoleucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 1040

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 89/229 (38%), Gaps = 36/229 (15%)

Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
           S ++  +     + D+      + +V E   P P  K T +   D     F S       
Sbjct: 477 SREELEKKCGKKVEDL-----HKHFVDEFTWPSPDGKGTMRRIPDVLDCWFES------- 524

Query: 321 DRPLLKSDGSYTYFAADLAY-FKCK--YERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                   GS  Y  A + Y F+ K  +E+ F       G D   G+   L  +AAA+ +
Sbjct: 525 --------GSMPY--AQIHYPFENKEWFEKNFPADFICEGLDQTRGWFYTLTILAAALFD 574

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSEL 434
             A +NV+   LV L  DG   KMSK   ++     V+D+ G+D++R  ++      +E 
Sbjct: 575 SPAFMNVVTNGLV-LAEDGK--KMSKSERNYSDPVEVIDKFGADALRMFLMNSAVVKAED 631

Query: 435 LDFDFCKVKEQSKENPVFYV-QY----AYARCRSIFRQAKDIFPDLDFD 478
           L +    VKE  K   + +   Y     YA   S   +     PD   D
Sbjct: 632 LRYSDDGVKEVLKTFIIPFWNAYSFFVTYANIDSFEPKGLKEAPDNPLD 680


>gi|301120103|ref|XP_002907779.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262106291|gb|EEY64343.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1052

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 51/199 (25%), Gaps = 42/199 (21%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFV----SANPTGPMHVGHCRCAVVGDTLASLM 154
                    +G     +      K +  FV      N TG +H+GH     + D L    
Sbjct: 94  AAWQDWWEAAGFFSCSDDKISKAKPDERFVMVIPPPNVTGSLHLGHALTVAIQDALTRWH 153

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+        + AG    ++                               V K L 
Sbjct: 154 RMLGHATLWVPGTDHAGIATQSV-------------------------------VEKRLL 182

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS--- 271
            +      +   EK+L  V D+  Q   +I                 E  +   D +   
Sbjct: 183 KEEGKSRHHLGREKFLERVWDWKNQYESRIHHQ----FRSVGCSVDWERQYFSMDDNCSR 238

Query: 272 PIRDIIDNLARQGYVYEGI 290
            +R     L  +G +Y   
Sbjct: 239 AVRHAFCQLWEEGLIYRAT 257


>gi|260102407|ref|ZP_05752644.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083775|gb|EEW67895.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 476

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 116/377 (30%), Gaps = 52/377 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R ++  DT+   + + GY+V       D   ++   A +      +
Sbjct: 30  CGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYKVKYVSNFTDVDDKMINEAHAEETTVPK 89

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 +   E          +  E A  +        E           + A ++ + D
Sbjct: 90  LAEKFINAFLEDT------TALNIEPATLHPRATHEIKE-----------IIAFVQTLID 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           I+ L                +  +K D    
Sbjct: 133 KGYAYESHGDVYYRAKKFKHYG-ELSDQNIERLEEG-----ASEHINDEEQNRKEDPIDF 186

Query: 308 QLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L  ++    D++  D P  K    +      +       +   D  I + G        
Sbjct: 187 ALW-KAQKEPDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFP 239

Query: 366 RLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             E   A    K  +  V   L    V + +D    KMSK   +F+T+  ++ EV    +
Sbjct: 240 HHENEIAQSEAKTGKKFVNYWLHNGFVTVGKD--QEKMSKSLHNFVTVHDILKEVDPQVL 297

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSK-----ENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           RF M   +    +++    +++ +      +N +  + Y          + +D  P  D 
Sbjct: 298 RFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINY----------RLEDDTPSKDS 347

Query: 478 DLFPRNVIPQESEFDTS 494
           D   + +     +F+ +
Sbjct: 348 DELAKAIAKTNEKFEVA 364


>gi|297727735|ref|NP_001176231.1| Os10g0506200 [Oryza sativa Japonica Group]
 gi|222613104|gb|EEE51236.1| hypothetical protein OsJ_32094 [Oryza sativa Japonica Group]
 gi|255679539|dbj|BAH94959.1| Os10g0506200 [Oryza sativa Japonica Group]
          Length = 1042

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K   S   S   +  +         I     N TG +H+GH     + D +   
Sbjct: 89  NPAAVEKSWYSWWESSQYFVADATSSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRW 148

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +    ++                     
Sbjct: 149 RRMSGYNALWVPGMDHAGIATQVVVEKRLMRDRNLSRHDLGR------------------ 190

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  E+L + ++    I+K              L+ L    D               +
Sbjct: 191 -DKFLLEVLQWKDQHGGTILKQ-------------LRTLGASLDWSRECFTMDEKRSKAV 236

Query: 274 RDIIDNLARQGYVYEG 289
            +    L ++G +Y  
Sbjct: 237 TEAFIRLHKEGLIYRD 252


>gi|148558505|ref|YP_001257249.1| isoleucyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148369790|gb|ABQ62662.1| isoleucyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|62088538|dbj|BAD92716.1| VARS2L protein variant [Homo sapiens]
          Length = 1653

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 65/235 (27%), Gaps = 44/235 (18%)

Query: 66  ELIVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122
           EL++  I   P  +   ++G     +   Y+  ++    +           R     G  
Sbjct: 662 ELVLYEIPTKPG-EKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGET 720

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
            ++     N TG +H+GH     + D L       G                        
Sbjct: 721 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRG------------------------ 756

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
               Q L+   SD        V  K    +L  +          E +L  V  +  +A  
Sbjct: 757 ---DQVLWVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKG 808

Query: 243 KIIRDDLKALNIQHDI--------FISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
             I + L+AL    D          +       G    + +    L + G +Y  
Sbjct: 809 GEICEQLRALGASLDWDRECFTMDVVVFCALVPGSSVAVTEAFVRLYKAGLLYRN 863


>gi|325294118|ref|YP_004279982.1| Leucyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061971|gb|ADY65662.1| Leucyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 876

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNEDKVFVTDNSDPREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 68  RARGFNV 74


>gi|289616640|emb|CBI56590.1| unnamed protein product [Sordaria macrospora]
          Length = 1043

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 2/101 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +PS +             +      K    K  I     N TG +H GH     + DTL 
Sbjct: 91  NPSAVEAAWYQWWEKAGYFKPEACRKPSAGKFVIPLPPPNVTGALHCGHALANSLQDTLI 150

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
                 GYE       + AG    ++   + W+ ++ +   
Sbjct: 151 RWYRMKGYETLWVPGCDHAGISTQSVVEKMLWKKEKKIRQE 191


>gi|258645206|ref|ZP_05732675.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402556|gb|EEW96103.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 829

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    I      +  +      K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 14  PQQIEKKWQQIWEETKAFETHFDPNKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFK 73

Query: 155 AFSGYEVT 162
           +  G+ V 
Sbjct: 74  SMQGFNVI 81


>gi|210621752|ref|ZP_03292801.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275]
 gi|210154634|gb|EEA85640.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275]
          Length = 887

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 53/203 (26%), Gaps = 36/203 (17%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N    P      L    +    +            I     N TG +H+GH     + D
Sbjct: 5   LNKTYDPKEFESRLYDEWMEKGYFASKPNKDKKPFTIMMPPPNITGQLHMGHALDHTLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDA--GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            L       G E            G    ++A  V                         
Sbjct: 65  VLIRWKRMQGCETL-------WLPGTDHASIATEVK------------------------ 93

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             V + +  +          ++++     +  +     I + LK L    D         
Sbjct: 94  --VVERIKKEEGKTKYELGRDEFMKRAWAWK-EEFGGKIENQLKKLGDSCDWDRQRFTMD 150

Query: 267 RGDPSPIRDIIDNLARQGYVYEG 289
           +G    +++    L  +G++Y G
Sbjct: 151 QGCNDAVKEFFIKLYEEGHIYRG 173



 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 72/222 (32%), Gaps = 36/222 (16%)

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V+   A    ++EK    + +L     L RD    KMSK  G+ I    ++D+ G+D++R
Sbjct: 495 VRMAFAAMFCMNEKP--FSHVLIHG--LVRDSQGRKMSKSLGNGIDPLEIIDQFGADALR 550

Query: 424 FMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           F ++   +    + F   +V+        F  +   A         +++   +       
Sbjct: 551 FTLITGNSPGNDMRFYMERVEFARN----FANKLWNASRFVFMNWDEEMMNGVTRSDVEA 606

Query: 483 NVIPQESEFDTSELQLIV----HLAEYPR--VIENATIAQEPYKLAFYLYDLASVFH-GH 535
           N+   +    +    ++     ++ ++     ++ A                   F    
Sbjct: 607 NLTLADKWIISRANNIVKDVTHNMDKFELGMALQKAYD-----------------FTWSE 649

Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +           +  ++ +       L      ++ + L ++
Sbjct: 650 YCDWYIEMVKPRLYGDDVEAKKA--ALYTLT-YVLETILKLL 688


>gi|78187490|ref|YP_375533.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123757168|sp|Q3B2E1|SYL_PELLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78167392|gb|ABB24490.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 805

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 333 YFAADLAYFKCKYERGFDNM---IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINV 383
           +     +      E+    M   +Y+ G++H+     Y +    V   +     K     
Sbjct: 503 FIDPRNSEHLVDAEKEHYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLKVVSTKEPFQK 562

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           L  + + L  DG   KMSK  G+ I   HV+++ G+D+VR
Sbjct: 563 LFNQGMILGEDGE--KMSKSRGNVIPADHVLEKYGADAVR 600


>gi|21226385|ref|NP_632307.1| leucyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|20904640|gb|AAM29979.1| Leucyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 971

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 49/179 (27%), Gaps = 13/179 (7%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +     +    K  K  I        G +H GH R   +GD +A      GY
Sbjct: 16  ENKWQKKWNESRIFQAEPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGY 75

Query: 160 EVT--REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELAD 215
            V     +++   G  I  LA  +  R  Q +  Y     +P    P         +  +
Sbjct: 76  NVLYPMGFHV--TGTPIVGLAELIASRDPQTMDVYERLHGIPGDILP-------ALDTPE 126

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           K         E+    I      +          K         + E D       P++
Sbjct: 127 KIVDYFKVEAEKAMRMIGYSIDWRRKFTTTDPTYKKFIEWQYTRLEEKDLIVKGSHPVK 185


>gi|85708728|ref|ZP_01039794.1| glutamyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690262|gb|EAQ30265.1| glutamyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 467

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 99/304 (32%), Gaps = 50/304 (16%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINT 176
             +   + +PTG +H+G  R A+     A       L+     +  R         Q   
Sbjct: 4   PVVTRFAPSPTGFLHIGGARTALFNWLYARHHDGKALLRIEDTDKKRS-------TQGAI 56

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKD 235
            A+     +    Y+ +               V  +L +  ++ +    PEE        
Sbjct: 57  DAILDGLDWLGLDYDEEPTFQSQ--RAERHAEVAHKLLEAGHAYKCFATPEE-------L 107

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +++A  +  +  ++      D   SE                  A +G  Y   L  P 
Sbjct: 108 EAMRAEQRANKQPMRYDGRWRDRDPSE------------------APEGASYAVRLKTPL 149

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
                  D  + ++  R+  + D +   +L++DG+ TY    LA     ++ G  ++I  
Sbjct: 150 EGEATIEDQVQGKVSVRNEELDDYI---ILRADGTPTYM---LAVVVDDHDMGVTHVIR- 202

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G DH     R   +  A+   +      +   V L       K+SKR G  +      D
Sbjct: 203 -GDDHLNNAFRQLPIYRAMDAIEGGWPDPIYAHVPLIHGSDGAKLSKRHG-ALGAETYRD 260

Query: 416 EVGS 419
           E G 
Sbjct: 261 EFGI 264


>gi|77408311|ref|ZP_00785053.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173074|gb|EAO76201.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 665

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 109/346 (31%), Gaps = 71/346 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G   + K   ELL+   +K++     Y  +A+ KI    L  
Sbjct: 66  -------GITPQEYVD--GMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQ 116

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +         +      + +    +     G + P      +   +  +   F
Sbjct: 117 GDIYLDEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPS---GHEVEKVSEESYFF 173

Query: 312 RSTMVGDDV------DRPLLKSDGSYTYFAA--------DLAYFKCKYERG------FDN 351
           R +   D +          ++ DG               DLA  +  Y  G        +
Sbjct: 174 RMSKYADRLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKH 233

Query: 352 MIYV---------------MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-- 394
           +IYV                  D S Y K   A    + +   + + +   ++ +  D  
Sbjct: 234 VIYVWIDALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLP 293

Query: 395 ------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                           KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 294 LPKRLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 339


>gi|296115214|ref|ZP_06833855.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978315|gb|EFG85052.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 898

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 55/201 (27%), Gaps = 37/201 (18%)

Query: 93  LSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L  S+        L ++      +  +         I     N TG +HVGH     + D
Sbjct: 2   LDKSFSPGETETSLYALWEGCGAFAADPDSPHRPYTIMIPPPNVTGTLHVGHALTMTLQD 61

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           TL       G +V  +   + AG     +   +                           
Sbjct: 62  TLIRWRRMQGRDVLWQPGTDHAGIATQLVVERML-------------------------- 95

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
                  K  +       E +   V D+  Q+    I   L+ L    D          G
Sbjct: 96  ------QKEGTSRQELGREAFEKRVWDWKAQSG-GGITTQLRRLGSSLDWPRERFTMDEG 148

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               +R++   L R+G +Y  
Sbjct: 149 LSKAVREVFVTLYREGLIYRD 169


>gi|269925297|ref|YP_003321920.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788957|gb|ACZ41098.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 528

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 79/222 (35%), Gaps = 35/222 (15%)

Query: 318 DDVDRPLLK-SDGSYTYFAA-DLAYFKCKYERGFDNMIYVMGSDHSGYV-----KRLEAV 370
           DD D+ +    D    Y  A D AY    Y R      Y + + H  +V      R  AV
Sbjct: 221 DDPDQVMYVWFDALGNYITALDYAYDGELYRR------YWLENPHRTHVIGKGILRFHAV 274

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR- 429
                   A   +     V  Y      K+SK  G+ I    +V+  G+D++R+  +   
Sbjct: 275 YWPAMLLSAGEPLPTTIYVHEYLTINGQKISKSLGNVIDPISIVERFGTDALRYWFVREV 334

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDL--- 479
             +E  DF + ++  +   +    +     R  S+ R+ ++          DL+ DL   
Sbjct: 335 SRTEDTDFTWDRLVTRYNADLANDLGNLLNRTVSMIRRYREGKVPSPSDSTDLEQDLRQI 394

Query: 480 ---FPRNVIPQESEFD-----TSELQLIVHLAEYPRVIENAT 513
               P  +     EFD     T+   L+     Y   +E + 
Sbjct: 395 AEGIPEKIYKYLDEFDLRAAITAIWDLVTRANRY---VEESA 433


>gi|195953430|ref|YP_002121720.1| leucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933042|gb|ACG57742.1| leucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 599

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                  +  +          +E     P+G +H+GH R   +GD +A +    G+ V
Sbjct: 9   KWQERWEKESKTQEPINKFYVLEMF-PYPSGKIHMGHVRNYTIGDAIARIKRMEGHNV 65


>gi|167820031|ref|ZP_02451711.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 872

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|21355675|ref|NP_648268.1| CG5660 [Drosophila melanogaster]
 gi|7295018|gb|AAF50346.1| CG5660 [Drosophila melanogaster]
 gi|20151733|gb|AAM11226.1| RE41093p [Drosophila melanogaster]
          Length = 994

 Score = 41.8 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 49/190 (25%), Gaps = 36/190 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    + +        K     +     N TG +H+GH   A V D +A      G
Sbjct: 51  AYWEREHRQANLPKASASSCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQREQLG 110

Query: 159 YEVTREYYINDA--GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y+V       D   G     +A  V                           V + +A  
Sbjct: 111 YQV-------DWVPGTDHAGIATQVV--------------------------VERTIAAS 137

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
            +          +L  V  +  +     I  DL+ L  + +               +   
Sbjct: 138 QAKTRHELGRSAFLDEVWRWKAEKG-AGIVQDLRQLGCKLNWQREYFTMDEQQAHAVNVA 196

Query: 277 IDNLARQGYV 286
            + L  +G +
Sbjct: 197 FERLFEEGLI 206


>gi|332305784|ref|YP_004433635.1| glutamyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173113|gb|AEE22367.1| glutamyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 469

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 91/279 (32%), Gaps = 42/279 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G +      I D    I            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLYA---KSQGGKFVLR--IED--TDIERSTQEAIDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +        +G Y          +  D+Y S + +  EE        +   A +  IR+ 
Sbjct: 61  MEWLGLTWDDGPY-------YQTQRFDRYKSLINDLLEEGKAYKC--FMTSAELDEIRET 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            KA          E   +   P   RD  D+   Q +V      P + K   K  +    
Sbjct: 112 QKA--------NGEKPRY---PGTWRDRTDHPEGQPFVIR-FKNPLEGKVVVKDHIRGDI 159

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  S +     D  +L+SDG+ TY   +       ++ G  ++  V G DH     R  
Sbjct: 160 EIANSELD----DLVILRSDGTPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 210

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        V +       K+SKR G  
Sbjct: 211 NILQALGAPVPE-----YAHVSMILGDDGKKLSKRHGAV 244


>gi|289705662|ref|ZP_06502047.1| valine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557610|gb|EFD50916.1| valine--tRNA ligase [Micrococcus luteus SK58]
          Length = 890

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 31/191 (16%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    +++E GSD+VR+     +      ++  ++K          
Sbjct: 599 DPDRKKMSKSKGNVVVPTDILEEFGSDAVRYWASSARLGADTAYEVAQMKIGR------- 651

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 R       A     +L          P+++   T+ L     LA     +E AT
Sbjct: 652 ------RLAIKLLNAAKFVLNLGATRDAVVRTPEDAARVTNALD-ASLLARLATTVEQAT 704

Query: 514 IAQEPYKLAFYLYDLASVFH-------GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            A +        YD A   +              E  + R    +          +V A+
Sbjct: 705 AAFD-------AYDYARALNVTESFFWQFTDDYVELIKDRAYGGHGEAEQAS---VVAAL 754

Query: 567 ASIINSGLNII 577
           A+ ++S L ++
Sbjct: 755 ATTLDSLLRLL 765


>gi|289549304|ref|YP_003474292.1| glutamyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182921|gb|ADC90165.1| glutamyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 469

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 98/307 (31%), Gaps = 64/307 (20%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +   + +PTG +H+G+ R A+     A                           L + 
Sbjct: 1   MVVTRFAPSPTGYLHLGNARTAIFSYLFAR-------------------HHKGKFILRIE 41

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              ++       ++         LK +G E  + Y        + + L I   Y+     
Sbjct: 42  DTDRERSTKEYEEMLI-----EDLKWLGLEWDEMYR-------QSERLDIYHQYA----- 84

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               + L      +  F S ++  +      +  I         Y       + K   K 
Sbjct: 85  ----EKLVEQGHAYPCFCSPEELEKERQEAYQKGIPYRYSGKCRYLTKEEAEELKKKGKP 140

Query: 303 DM------DRKQLLFRSTMVG-------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                   D + ++FR  + G       D  D  +++SDG  TY    +         G 
Sbjct: 141 FAIRFRVPDGRVVVFRDLVKGYISINVDDFGDFVIVRSDGMPTYNFVVV---VDDALMGV 197

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I   G DH     +   +  A+  K  +   L    V L  D    K+SKR G  ++
Sbjct: 198 THVIR--GEDHIPNTPKQILIYEALGLKIPEFAHL---PVILGPD--RSKLSKRHG-AVS 249

Query: 410 LRHVVDE 416
           +R+  +E
Sbjct: 250 VRNYREE 256


>gi|282859005|ref|ZP_06268141.1| glutamate--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588173|gb|EFB93342.1| glutamate--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 505

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 92/290 (31%), Gaps = 45/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVT--REYYINDAGAQINTL 177
           + +PTG +H+G  R A+          GD +  +     +      E YI          
Sbjct: 11  APSPTGALHIGGVRTALYNYLFAKQNGGDLVFRIEDTDSHRFVPGAEEYI---------- 60

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             S  W   Q  ++       G   G Y +   +++  KY  ELL+  +  ++       
Sbjct: 61  LESFKWLGIQ--FDEGVSF--GGDKGPYRQSERRDIYKKYVDELLSAGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++A  K I                     R   +     +  L   G  Y         +
Sbjct: 116 LEAKRKEIE--------NFQYDAHTRGMMRNSLTLSESEVKTLIEDGNQYVVRFKIEPGE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R  +  ++ ++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 EVHVNDMIRGDVRVKTDILD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYHAFGWEDTMPAFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|222111555|ref|YP_002553819.1| valyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221730999|gb|ACM33819.1| valyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 961

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 82/289 (28%), Gaps = 54/289 (18%)

Query: 83  IAGKGFINLYLSPSYLRKILSSIV----------VSGIEYGRNLIGKGTKVNIEFVSANP 132
           I   G +N  LS S+    L +            V+G               I+    N 
Sbjct: 11  IEQPG-LN-SLSKSFEPAALEAHWGPEWEKRGYGVAGYRGTGAAQAGQPAFAIQLPPPNV 68

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192
           TG +H+GH     + D+L       G+        + AG  I T  +      +Q +  +
Sbjct: 69  TGTLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAG--IATQIVVERQLQEQGVSRH 126

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           D   P       ++K V  E  +K                            I   ++ L
Sbjct: 127 DLGRP------DFVKKV-WEWKEKSG------------------------NTITTQMRRL 155

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDM 304
               D               + D    L +QG +Y G         L    S    + + 
Sbjct: 156 GDSVDWSREYFTMDDKLSKVVTDTFVKLYQQGLIYRGKRLVNWDPKLQSAVSDLEVENEE 215

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
               L   +  + D   + ++ +         D+A      +  + ++I
Sbjct: 216 KDGSLWHIAYPLADGSGQLVVATT-RPETMLGDVAVMVHPEDERYAHLI 263


>gi|78184679|ref|YP_377114.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729939|sp|Q3AXV7|SYL_SYNS9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78168973|gb|ABB26070.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 884

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 92  YLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              PS L +   +     G++       K     +      P+G +H+GH R  V+ D +
Sbjct: 31  RYDPSALEQRWRARWKDQGLDTTETESSKPGFFALSMF-PYPSGSLHMGHVRNYVITDVI 89

Query: 151 ASLMAFSG 158
           A +    G
Sbjct: 90  ARVQRMRG 97


>gi|50843323|ref|YP_056550.1| glutamyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289424837|ref|ZP_06426619.1| glutamate--tRNA ligase [Propionibacterium acnes SK187]
 gi|289427712|ref|ZP_06429424.1| glutamate--tRNA ligase [Propionibacterium acnes J165]
 gi|295131393|ref|YP_003582056.1| glutamate--tRNA ligase [Propionibacterium acnes SK137]
 gi|67461737|sp|Q6A6M1|SYE_PROAC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|50840925|gb|AAT83592.1| glutamyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289154800|gb|EFD03483.1| glutamate--tRNA ligase [Propionibacterium acnes SK187]
 gi|289159203|gb|EFD07395.1| glutamate--tRNA ligase [Propionibacterium acnes J165]
 gi|291375985|gb|ADD99839.1| glutamate--tRNA ligase [Propionibacterium acnes SK137]
 gi|332676264|gb|AEE73080.1| glutamate--tRNA ligase [Propionibacterium acnes 266]
          Length = 497

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 95/286 (33%), Gaps = 47/286 (16%)

Query: 128 VSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           V+ +PTG  HVG    A+          G  +  +      +  R   + D+  QI    
Sbjct: 11  VAPSPTGDPHVGTAYMALFDKAWAQRTGGQFVLRI-----EDTDRTRLVADSEDQI---- 61

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
               ++  + L  +  + P     G Y  +   E  D Y   +    E         +  
Sbjct: 62  ----YQTLEWLGLSPDESP--LVGGPYEPYKQSERLDTYKPLVEKLIESGHAYRC--WCS 113

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           Q  +K +R++  A          E  + R      ++  +     G+      P  +   
Sbjct: 114 QERLKQLREERAAAKSP------ETGYDRMCLGMSKE--ERAKLPGFT---ETPVVRMLI 162

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D++   L+  +       D+ +LK+DG  TY    +A     +  G D +  V G 
Sbjct: 163 PEDVDLEFDDLIRGTVRAPRPDDQVILKADGFPTYH---MAVVVDDHLMGIDTV--VRGE 217

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           +      +   +   +  +  +   +      L R+    K+SKR 
Sbjct: 218 EWISSTPKHLLLYKWLGWEAPKFAHM-----PLLRNTDKSKISKRK 258


>gi|325963645|ref|YP_004241551.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469732|gb|ADX73417.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 33/190 (17%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    V++E GSD+VR+     K      ++  ++K          
Sbjct: 589 DPDRKKMSKSKGNVVVPTDVLEEYGSDAVRYWAASAKLGADTAYEIAQMK------IGRR 642

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           +                    +  D       P +             LA+   V+  +T
Sbjct: 643 LAIKLLNASKFVLNLGATENSVVSDDLAVLANPLDRAV----------LAQLSEVVAQST 692

Query: 514 IAQEPYKLAFY----LYDLASVFHGHW---SHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            A E      Y       +   F   W       E  + R   A         L    A+
Sbjct: 693 RAFE-----NYDYARALQITESF--FWQFTDDYVELIKDRAYGAAGEAEQASVLA---AL 742

Query: 567 ASIINSGLNI 576
           A+ +++ L +
Sbjct: 743 ATTLDTLLRL 752


>gi|284928619|ref|YP_003421141.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809078|gb|ADB94783.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 868

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K     +  G++       K     +      P+G +H+GH R  V+ D +A      G
Sbjct: 22  NKWQQEWLRQGLDKTPENSEKQKFYALSMF-PYPSGNLHMGHVRNYVITDVIARFKRLQG 80

Query: 159 YEV 161
           Y V
Sbjct: 81  YSV 83


>gi|256059565|ref|ZP_05449764.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261323533|ref|ZP_05962730.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261299513|gb|EEY03010.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|256826639|ref|YP_003150598.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582782|gb|ACU93916.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           ++  +   + + +      K  K  +E     P+G +H+GH R   +GD +A      G+
Sbjct: 12  RMQQAWAAADLFHVTEDADKPKKYVLEMF-PYPSGDIHMGHVRNYSIGDVVARYNGMRGF 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|222087922|ref|YP_002546460.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221725370|gb|ACM28526.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 876

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         +    N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQKWNDENVFLTDNADLREKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYK 67

Query: 155 AFSGYEV 161
              GY V
Sbjct: 68  RARGYNV 74


>gi|57116675|gb|AAW33812.1| valyl-tRNA synthetase [Haemophilus influenzae]
          Length = 102

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 22/70 (31%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + + L         +  +         I     N TG +H+GH     + D L 
Sbjct: 10  RFNPSAVEQALYQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDILI 69

Query: 152 SLMAFSGYEV 161
                 G+  
Sbjct: 70  RFNRMEGHNT 79


>gi|310777973|ref|YP_003966306.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747296|gb|ADO81958.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 869

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         I    N +       +  +   P+G +H+GH R   +GD +A      GY
Sbjct: 12  KWQEKWKQDNIFKSDNKVEGKENYYVLEMLPYPSGKLHMGHVRNYTIGDVIARYKKMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|60390728|sp|Q8Q054|SYL_METMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 966

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 49/179 (27%), Gaps = 13/179 (7%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +       +     +    K  K  I        G +H GH R   +GD +A      GY
Sbjct: 11  ENKWQKKWNESRIFQAEPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGY 70

Query: 160 EVT--REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELAD 215
            V     +++   G  I  LA  +  R  Q +  Y     +P    P         +  +
Sbjct: 71  NVLYPMGFHV--TGTPIVGLAELIASRDPQTMDVYERLHGIPGDILP-------ALDTPE 121

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           K         E+    I      +          K         + E D       P++
Sbjct: 122 KIVDYFKVEAEKAMRMIGYSIDWRRKFTTTDPTYKKFIEWQYTRLEEKDLIVKGSHPVK 180


>gi|328462973|gb|EGF34781.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 473

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 116/377 (30%), Gaps = 52/377 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R ++  DT+   + + GY+V       D   ++   A +      +
Sbjct: 27  CGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYKVKYVSNFTDVDDKMINEAHAEETTVPK 86

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 +   E          +  E A  +        E           + A ++ + D
Sbjct: 87  LAEKFINAFLEDT------TALNIEPATLHPRATHEIKE-----------IIAFVQTLID 129

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F           I+ L                +  +K D    
Sbjct: 130 KGYAYESHGDVYYRAKKFKHYG-ELSDQNIERLEEG-----ASEHINDEEQNRKEDPIDF 183

Query: 308 QLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L  ++    D++  D P  K    +      +       +   D  I + G        
Sbjct: 184 ALW-KAQKEPDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFP 236

Query: 366 RLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             E   A    K  +  V   L    V + +D    KMSK   +F+T+  ++ EV    +
Sbjct: 237 HHENEIAQSEAKTGKKFVNYWLHNGFVTVGKD--QEKMSKSLHNFVTVHDILKEVDPQVL 294

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSK-----ENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           RF M   +    +++    +++ +      +N +  + Y          + +D  P  D 
Sbjct: 295 RFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINY----------RLEDDTPSKDS 344

Query: 478 DLFPRNVIPQESEFDTS 494
           D   + +     +F+ +
Sbjct: 345 DELAKAIAKTNEKFEVA 361


>gi|300870124|ref|YP_003784995.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687823|gb|ADK30494.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 853

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 110/368 (29%), Gaps = 40/368 (10%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N       + K           +         K  +  +   P+G MH+GH     + D+
Sbjct: 4   NFT----TIEKKWQKYWKDNQSFKTVSKPTDKKYYVLEMFPYPSGKMHMGHVSNYTIADS 59

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPGVY 205
           +A      GY++      +  G      A+       +    N +++ +      Y   +
Sbjct: 60  IARYYKLLGYDILHPMGWDAFGMPAENAAIEHKTHPAEWTLKNIANMKDQLNLLGYSYDW 119

Query: 206 LKHVGKELAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            + V   L D  K+    +    EK L + +              L    +  +      
Sbjct: 120 DREVTTCLPDYYKWGQWFILKMYEKGL-LYRKGGDVNWCDHCNTVLANEQVTAEGTCWRC 178

Query: 264 DFH------RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D              + D  + L     + EG  P       QK  + R    + +  + 
Sbjct: 179 DGEVTKKKLEQWYIKVTDYAEQLDADLKLLEGYWPDNVI-AMQKNWIGRSVGAYINFNLD 237

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAA 373
           D  D P+  +     Y    +A         +D ++ +   +       ++K+   +   
Sbjct: 238 DGKDFPIFTTRPDTIYGVTYMAIAW-----NYDGLLDMCTPEQKSAVEEFIKKSAKIDQK 292

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
              +K    V     V    +G    +   A +F+     + E GS +V    +     +
Sbjct: 293 TDYEKE--GVFTGRYVVNPFNGEKAPLY--AANFV-----LAEYGSGAV----MAVPAHD 339

Query: 434 LLDFDFCK 441
             DF+F K
Sbjct: 340 QRDFEFAK 347


>gi|257866932|ref|ZP_05646585.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257800988|gb|EEV29918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 767

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  YF   +          +D +       IY+ G++H+     Y +        +   
Sbjct: 458 GSSWYFLRFIDPHNKSVLADYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVV 517

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    V+++ G+D++R
Sbjct: 518 PTKEPFEKLFNQGMILGEN--NEKMSKSRGNVVNPDDVINQYGADTLR 563


>gi|216264257|ref|ZP_03436249.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980730|gb|EEC21537.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 480

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 62/338 (18%), Positives = 114/338 (33%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   I V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDIFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++ N +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFY 340


>gi|150398390|ref|YP_001328857.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166231646|sp|A6UEE2|SYL_SINMW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150029905|gb|ABR62022.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 876

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                +         I   +N   +     +E     P+G +H+GH R   +GD +A   
Sbjct: 9   RDAEPRWQQQWEAGKIFETKNDDPREKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYK 67

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 68  RARGFNV 74


>gi|49476194|ref|YP_034235.1| leucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|60390696|sp|Q6G1W2|SYL_BARHE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49239002|emb|CAF28302.1| Leucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 880

 Score = 41.8 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    +   +I      +      +  K  +  +   P+G +H+GH R   +GD +A
Sbjct: 11  RYNPRACERKWQAIWDEKKTFQTVQEDRREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 70

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 71  RYKRAKGFNV 80


>gi|325288845|ref|YP_004265026.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 924

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 99/309 (32%), Gaps = 32/309 (10%)

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSPI 273
           + L      +W+P      +  M+   R D      +   +   IF  ED    G     
Sbjct: 421 AALEEIDRVEWIPAWGKDRIYNMIAD-RGDWCISRQRTWGVPIPIFYCED---CGKEIIN 476

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
              I+ L       +       + + ++   +  +     T    + D   +  D   ++
Sbjct: 477 EQTIEKLQE--IFRQEGSDAWFAHSVEELLPEGLKCQCGGTEFRKETDIMDVWFDSGTSH 534

Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
               +   K + E  +   +Y+ GSD   G+     + + A   +     VL    +   
Sbjct: 535 ----VGVLKLRPELSYPADMYLEGSDQHRGWFNSSLSTSVAAYGQAPYKTVLTHGFLV-- 588

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            D    KMSK  G+ +    VV ++G+D +R  +        +      + +  +     
Sbjct: 589 -DEKGRKMSKSQGNGVDPLQVVRDMGADILRLWVSSADYRNDVAASPRIMNQMVE----- 642

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
               AY + R+  R          +D  P     + S+    +  ++  LA     +  A
Sbjct: 643 ----AYRKIRNTLRFLLGNL----YDFNPEQDRVEYSKLQEIDRWVLTRLARVIEKVIKA 694

Query: 513 TIAQEPYKL 521
               E + +
Sbjct: 695 YETYEFHVV 703


>gi|317179745|dbj|BAJ57533.1| leucyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 806

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++      K  +  +   P+G +H+GH R   +GD LA       Y
Sbjct: 9   KWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIGDALARYYRLHHY 67

Query: 160 EV 161
            V
Sbjct: 68  NV 69


>gi|301059426|ref|ZP_07200347.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446462|gb|EFK10306.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 1011

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 16/166 (9%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------- 152
                   +G+        +     +E     P+G +H+GH R   +GD +A        
Sbjct: 164 SWQKRWEKAGVFKAVEDPSREKYYLLEMF-PYPSGKIHIGHVRNYTIGDVVARYKKMCGK 222

Query: 153 -LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++   G++       N   A I        W Y+  + N  + L    +   + + +  
Sbjct: 223 NVLHPMGWDAFGMPAEN---AAIENNTHPAKWTYEN-IENMKAQLKRMGFSYDWDRELAT 278

Query: 212 ELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
              D Y  E L F E  EK L   K   V    +  +  L    ++
Sbjct: 279 CDPDYYRWEQLVFLEMYEKGLAYRKKTHVN-WCEKCQTVLANEQVE 323


>gi|288925765|ref|ZP_06419696.1| isoleucine--tRNA ligase [Prevotella buccae D17]
 gi|288337420|gb|EFC75775.1| isoleucine--tRNA ligase [Prevotella buccae D17]
          Length = 1129

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 109/344 (31%), Gaps = 57/344 (16%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ ++         G       +EL D+    +     
Sbjct: 491 LNDW-----NLSRSRFWGTPLPVWRDEE-------RGEKCIGSLQELYDEIEKSVAAGVM 538

Query: 227 EKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNLAR 282
                  K +     +     + DL    + + + ++E     +R       D+ID    
Sbjct: 539 SGNPLKEKGFVPGDYSQENYDKIDLHRPYVDNIVLVNESGKPMYRET-----DLIDVWFD 593

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G +    L  P     +      +Q +  S   G  +      +D              
Sbjct: 594 SGSMPYAQLHYPFEGEMKHGTEADRQEMVESRYNGMPIPPKFYPAD-------------- 639

Query: 343 CKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                     I   G D   G+   L A+A  V +  A  NV+   LV    D    KMS
Sbjct: 640 ---------FINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMS 686

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFY 453
           K  G+      ++ + G+D VRF M+      + L FD   V E  ++          F+
Sbjct: 687 KHVGNVTDPFEMIGKYGADPVRFYMMTNSEPWDNLKFDPNGVDEVRRKFFGTLYNTYSFF 746

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             YA            D+    + D +  + +    +   +EL+
Sbjct: 747 ALYANVDNFDPEASQVDLAKRPEIDRWILSCLSTLVKEVETELE 790


>gi|227540565|ref|ZP_03970614.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239647|gb|EEI89662.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 884

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 53/213 (24%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                K  S  + +G  + R+   +     I     N TG +H+GH     + D L    
Sbjct: 23  KEAEEKWYSYWMNNG--FFRSTPDEREPYTIVMPPPNVTGVLHMGHMLNNTIQDVLIRRA 80

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G            G    ++A              D    +             E  
Sbjct: 81  RMQGKNACWVP-----GTDHASIATEAKVVAMLKEQGID----KKSISREDFLKYAWEWK 131

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY                          II   L+ L    D   ++          + 
Sbjct: 132 EKYG------------------------GIILKQLEKLGASCDWERTKFTMDPDLSEAVL 167

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           D      ++GY+Y G+         +    D +
Sbjct: 168 DTFIKFYKEGYIYRGVRMVNWDPQGKTALSDEE 200


>gi|158289903|ref|XP_311528.4| AGAP010420-PA [Anopheles gambiae str. PEST]
 gi|157018382|gb|EAA07254.5| AGAP010420-PA [Anopheles gambiae str. PEST]
          Length = 1052

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 55/210 (26%), Gaps = 33/210 (15%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+  K        G+   +    KG  V +     N TG +H+GH     + D +     
Sbjct: 104 SWWEKEGFFKPEYGVSQRKLNNPKGQFVMV-IPPPNVTGSLHLGHALTNAIEDAITRWHR 162

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG     +     WR                               
Sbjct: 163 MKGRTTLWVPGCDHAGIATQVVVEKKLWR------------------------------- 191

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           ++     +   EK++  +  +  +   +I    LK L    D   +           + +
Sbjct: 192 EHKQTRHDLGREKFIDKIWQWRNEKGDRIYHQ-LKKLGSSFDWDRACFTMDPKLCKAVTE 250

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
               +   G +Y        S T +    D
Sbjct: 251 AFVRMHEMGMIYRSSRLVNWSCTLRSAISD 280


>gi|284043001|ref|YP_003393341.1| tRNA synthetase class I (M) [Conexibacter woesei DSM 14684]
 gi|283947222|gb|ADB49966.1| tRNA synthetase class I (M) [Conexibacter woesei DSM 14684]
          Length = 727

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 13/90 (14%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSE---------KKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           + G+D  G +      A  + +          +    VL+ E+V L  DG   KMSK  G
Sbjct: 498 IWGADGGGSMFDQRMTAKVLRDVGVLPHIEQGEPHERVLMHEMVHL--DGR--KMSKHLG 553

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           + +    ++  VG+D+VR  +L+      +
Sbjct: 554 NVVDPDELLARVGADTVRLAVLYAAAPTNI 583


>gi|241760884|ref|ZP_04758973.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374503|gb|EER63964.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 941

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 27/231 (11%)

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +Y  G    +Y+ GSD      +   + +  S   A    +L     L  DG   KMSK 
Sbjct: 577 RYGEGTRAQLYLEGSDQHRGWFQSSLLESCGSRGHAPYEAVLTHGFTL--DGTGRKMSKS 634

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I    V++E G+D +R  +     +E +      +   S           Y + R+
Sbjct: 635 VGNVIDPLKVINESGADILRMWVASTDYNEDVRISKEVLSGTSDG---------YRKLRN 685

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            FR           + F        ++    E  ++  LAE  + +  +       +   
Sbjct: 686 SFRYLLGA-----LEGFSEEEKVDLADLPELEKYILHLLAELDQALHESVNGFAFNR--- 737

Query: 524 YLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           YL  L+    +     +   R++     V     + T  R     A  +++
Sbjct: 738 YLRLLSDFVNNDLSAFFFDIRKDRLYCDVGEAAPQGTEER----RAYRTVL 784


>gi|221218126|ref|ZP_03589592.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192074|gb|EEE18295.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 480

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 115/338 (34%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYVFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   + V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++EN +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|167915171|ref|ZP_02502262.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 939

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 75/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERGGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++ G+  Y A                 +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARA-GTGGYPAD----------------LYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAVLTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|156101325|ref|XP_001616356.1| glutamyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148805230|gb|EDL46629.1| glutamyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 575

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 122/353 (34%), Gaps = 72/353 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +HVG CR  +   TLA       ++     +V R     +A      +   + 
Sbjct: 91  APSPTGFLHVGGCRTFLYNYTLAKQLKGSLILRLEDTDVER-----NAQDSFREIVKDLR 145

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         D     G   G Y +    EL  + + E +   +                
Sbjct: 146 WLNLSWDEGPDV----GGAYGPYKQSEKIELYKEIAHEFVKEGKA------------YFC 189

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              +D+L     +  +  ++  + R       +++     +   Y      P  +     
Sbjct: 190 FCTKDELSEKKEKAKLVRTKYTYDRACRDLSDEMVKQNLSKKKPYTIRFRSPTGRKITLN 249

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVMGSDH- 360
           D+ +K++         D D  +L+SD S TY F+A +     +      ++I   G +H 
Sbjct: 250 DILKKEI-----TDSVDEDFIILRSDSSPTYNFSASVDDHLMRVS----HVIR--GVEHI 298

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416
           S   K++  V  A+  +     + L   V +       K+SKR  +++ +R++ +E    
Sbjct: 299 SNTFKQI-LVLEALRAR-----IPLYAHVPVITTVQKKKISKRNNEYL-VRNLREEGFKP 351

Query: 417 ---------VGSDSVRF------------MMLWRKNSELLDFDFCKVKEQSKE 448
                    +G  SV                L   N   L FD  K+K  +K+
Sbjct: 352 ECVINYMGTLGWGSVSKREFYTLDELIGSFDLRALNKSALVFDIKKLKWMNKK 404


>gi|5932379|gb|AAD56932.1|AF180145_24 isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 941

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 27/231 (11%)

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +Y  G    +Y+ GSD      +   + +  S   A    +L     L  DG   KMSK 
Sbjct: 577 RYGEGTRAQLYLEGSDQHRGWFQSSLLESCGSRGHAPYEAVLTHGFTL--DGTGRKMSKS 634

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I    V++E G+D +R  +     +E +      +   S           Y + R+
Sbjct: 635 VGNVIDPLKVINESGADILRMWVASTDYNEDVRISKEVLSGTSDG---------YRKLRN 685

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            FR           + F        ++    E  ++  LAE  + +  +       +   
Sbjct: 686 SFRYLLGA-----LEGFSEEEKVDLADLPELEKYILHLLAELDQALHESVNGFAFNR--- 737

Query: 524 YLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           YL  L+    +     +   R++     V     + T  R     A  +++
Sbjct: 738 YLRLLSDFVNNDLSAFFFDIRKDRLYCDVGEAAPQGTEER----RAYRTVL 784


>gi|320104232|ref|YP_004179823.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751514|gb|ADV63274.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 530

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 86/291 (29%), Gaps = 57/291 (19%)

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSE 220
           Y++D   Q   +  ++   Y   +  ++     G    +       ++  K     Y   
Sbjct: 72  YVDDMARQFQEVWRALDLSYDDFIQTSEPRHAAGCRRFIQQVFDNGDIYKKSYVGLYCDG 131

Query: 221 LLNFPEEK-------------WLPIVKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDF 265
              F  +K                + +        K+ +  D L      H  FI  +  
Sbjct: 132 CEAFKTDKEVAEGNGRCPLHPNQELRRVEEENYFFKLSKYADALLDFYRSHPDFIQPESR 191

Query: 266 HRGDPSPIRDIIDNLA--RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                + +   + +L+  R+G+ + GI  P   + T     D       +   GD  D  
Sbjct: 192 RNEIVNFVEAGLQDLSISRKGFTW-GIKVPFDEEQTIYVWFDALLNYLTAIGYGDADDPD 250

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-----AVAAAVSEKK 378
                             + +     D  ++V+G D    + R       A+  +   + 
Sbjct: 251 ------------------RWRAWWPAD--VHVIGKD----ITRFHCVIWPAMLMSAGIEP 286

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
            +  V     V +       K SK  G+ +    +    GSD+VR+     
Sbjct: 287 PR-RVFGHGFVYV----KGAKASKSQGNVVDPHELTQRFGSDAVRYYFARE 332


>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 469

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 97/309 (31%), Gaps = 37/309 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  VV D ++  +  SGY VT    I D   +I   A        Q        +
Sbjct: 37  HLGHARVMVVFDMVSRWLRSSGYAVTYVRNITDIDDKIIKRANENGETIGQLTQRFIEAM 96

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E       ++   +  A ++   +                +Q +  +I      +    
Sbjct: 97  DEDSAKLGIIRPDIEPKATEFIDGM----------------IQMISALIEKGFAYVAANG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+F S ++F  G        +++L     V                 +   +  + S   
Sbjct: 141 DVFYSVNNF-EGYGKLSGKSLEDLRAGERVEVDTHKKDPMDFVLWKSVKPNEPSWDSPFG 199

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV-------KRLEA 369
           G +  +      G   +     A         FD    + G               + EA
Sbjct: 200 GPNGGK------GRPGWHIECSAMSSHHLGEHFD----IHGGGQDLQFPHHENEIAQSEA 249

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             +   E    +N  +        D    KMSK  G+F T+R V+++  ++ VRF +L  
Sbjct: 250 AHSHNGEPCQMVNYWMHNGFVRVDD---EKMSKSLGNFFTIRTVLEKYDAEVVRFFILRA 306

Query: 430 KNSELLDFD 438
                L++ 
Sbjct: 307 HYRSPLNYS 315


>gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254547812|gb|ACT56689.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 511

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 103/346 (29%), Gaps = 47/346 (13%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           + +  K+ I    A P    H+GH    ++ D LA      G +V      ++ G +I  
Sbjct: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
            A +     +  +  N  +  +       L     +          +     W  I    
Sbjct: 61  AAQNAGVTTKVFVDQNSRNFRD---MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI----IDNLARQGY-----VY 287
            +          L+      + + ++D+ ++G      +     +  +  +GY      Y
Sbjct: 118 DIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-------------------- 327
           +  L        +      ++    S +     D  L +                     
Sbjct: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232

Query: 328 DGSYTYFAADLAYFKCKYERGFDNM----IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383
           D    Y       +    +          ++V+G D    + R  A+        A + +
Sbjct: 233 DALTNYLTT--TGYLDNPDGSKAKFWPADLHVIGKD----ILRFHAIYWPAFLLSANLPL 286

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                   +      K+SK  G+ I    V++EVG D++R+ ++  
Sbjct: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332


>gi|229846827|ref|ZP_04466934.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810316|gb|EEP46035.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 682

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 70/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    +D+D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREDIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|170730502|ref|YP_001775935.1| leucyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687921|sp|B0U376|SYL_XYLFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167965295|gb|ACA12305.1| leucyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +  I      S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 7   TYDPQRIESIAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 66

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 67  RYKRMTGHNV 76


>gi|15897784|ref|NP_342389.1| valyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284175587|ref|ZP_06389556.1| valyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|74542081|sp|Q97ZK9|SYV_SULSO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13814075|gb|AAK41179.1| Valyl-tRNA synthetase (valS) [Sulfolobus solfataricus P2]
          Length = 842

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 49  IEEKWQKIWLSEEYWRDVFRFRDEDDKAPRFVIDTPPPFTSGELHMGHAYWVTIADTIGR 108

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GY V           Q   L   +  +Y+  +  ++  L              +E
Sbjct: 109 FKRLEGYNVL---LPQGWDTQG--LPTELKVQYKLGIPKDNRQL-----FLQKCIEWTEE 158

Query: 213 LADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL 249
           +  K    ++      +W             KII+  L
Sbjct: 159 MIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQKSL 196



 Score = 37.6 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    V++ G+D++R  +L     +   F + 
Sbjct: 556 FTTVLVNGQVLGPDGT--RMSKSKGNVVSPLDRVNDFGADAIRMALLDASIGDDFPFKWD 613

Query: 441 KVK 443
            VK
Sbjct: 614 IVK 616


>gi|71898470|ref|ZP_00680642.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
 gi|71731783|gb|EAO33842.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +  I      S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 7   TYDPQRIESIAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 66

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 67  RYKRMTGHNV 76


>gi|71276301|ref|ZP_00652579.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Dixon]
 gi|71162909|gb|EAO12633.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Dixon]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +  I      S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 7   TYDPQRIESIAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 66

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 67  RYKRMTGHNV 76


>gi|300725029|ref|YP_003714355.1| valine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631572|emb|CBJ92281.1| valine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 965

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 62/216 (28%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + + L +       +  N         I     N TG +H+GH     + DT+ 
Sbjct: 18  TYNPTEIEQPLYNHWEKSGYFKPNGDTSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMV 77

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 78  RYQRMQGKNTLWQAGTDHAGIATQMV-------------------------------VER 106

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A +      ++  + ++  +  +  ++    I + ++ L    D          G   
Sbjct: 107 KIAAEEGKTRHDYGRDAFIDKIWQWKAESG-GNISNQMRRLGNSVDWERERFTMDEGLSK 165

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L ++  +Y G          +    D +
Sbjct: 166 AVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLE 201


>gi|237747479|ref|ZP_04577959.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378830|gb|EEO28921.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 970

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 78/232 (33%), Gaps = 25/232 (10%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDV-------DRPLLKSDGSY 331
              G ++   L   +   K  +K  ++  Q L    ++GD+        D   +  D   
Sbjct: 518 RETGELHPKTLELLEEIAKRVEKEGIEAWQTLDPKELLGDEAGQYEKNRDTLDVWFDSGA 577

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+          +     D  +Y+ GSD   G+       ++ +        +L    V 
Sbjct: 578 THLTVLRGSHARELRFPAD--LYLEGSDQHRGWFHSSLLTSSMLDGCPPYKMLLTHGFVV 635

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ I  + V D +G+D +R  +     S  L      +K  ++   
Sbjct: 636 ---DGEGRKMSKSMGNVIAPQKVFDTLGADILRLWVASTDYSGELSISDEILKRVTE--- 689

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
                 +Y R R+  R       D D        I +  E D   L  +  L
Sbjct: 690 ------SYRRIRNTLRFLLSNTADFDA-TRDAVAIDELLEVDRYALASMKSL 734


>gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 490

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 3/91 (3%)

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           I + G          E   A  S    + +         L  DG   KMSK  G+F TL+
Sbjct: 220 IDIHGGGQDLMFPHHENENAQASCAWDKPLANYWMHAGMLRVDGE--KMSKSLGNFYTLK 277

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
            V+D   +D+VR +ML       LDF F ++
Sbjct: 278 EVLDAYPADAVRLLMLQTHYRAPLDFSFERL 308


>gi|254780933|ref|YP_003065346.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040610|gb|ACT57406.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 947

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 355 VMGSDHSGYVKRLEAVAAAV-----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           V G D   +      +   +     +E K      +  +  L RD    KMSK  G+ + 
Sbjct: 544 VTGFD-ILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVD 602

Query: 410 LRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKVK 443
              V+D+ G+D++RF   +       ++ D  ++ 
Sbjct: 603 PIDVIDQYGADALRFYFSIMAVQGRDINLDLERIA 637


>gi|71893995|ref|YP_279441.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852122|gb|AAZ44730.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 790

 Score = 41.8 bits (97), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG----YVKRLEAVAAAVSE--K 377
           +LK    Y    + +AY K K     D  +Y+ G +H+     Y +    V         
Sbjct: 486 ILKEKDKYLPLDSKIAYDKFKKWLPVD--LYIGGQEHAVGHLIYSRFWHKVLFDAGIVPN 543

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                 ++ + + L  DG   KMSK  G+ I    ++D+ G+D++R  ++
Sbjct: 544 SEPFQKIIHQGMLLGSDGQ--KMSKSKGNTINPTEIIDKFGADTIRIFLM 591


>gi|303238789|ref|ZP_07325321.1| isoleucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593668|gb|EFL63384.1| isoleucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 1039

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 12/108 (11%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + ++ A  NV++   V    D   IKMSK  G+ +    V+D+ 
Sbjct: 553 DQTRGWFYTLLAISTLLFDEPAFKNVIVLGHVN---DKDGIKMSKHKGNVVDPWTVLDKQ 609

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSK--------ENPVFYVQYA 457
           G+D+VR+         L +  + +   +S+            FYV YA
Sbjct: 610 GADAVRWYFYINSAPWLPNRFYEEAVSESQRKFMGTLWNTYAFYVLYA 657


>gi|303245563|ref|ZP_07331846.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492826|gb|EFL52691.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 837

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 16/203 (7%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K   +I   G  +         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 6   PEDVEKKWQAIWEEGGHFKVEADPSRPKYYVLEMFPYPSGRIHMGHVRNYCIGDVVARFK 65

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G  V      +  G      A+           +N   +        Y     +ELA
Sbjct: 66  RMEGNNVLHPMGWDAFGMPAENAAIKHKLHPAAWTLSNIESMRTQIKRLGYSYDWRRELA 125

Query: 215 DKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNI------QHDIFISE 262
             +    ++         EK L + + YS Q   +     L    +      + D  + +
Sbjct: 126 TCHPDYYVHEQRFFLKLLEKGL-VYRKYSPQNWCETCGTVLANEQVIDGCCWRCDQPVVQ 184

Query: 263 DDFHRG---DPSPIRDIIDNLAR 282
            D  +      +   +++D+LA+
Sbjct: 185 KDLEQWFLRITAYAEELLDDLAQ 207


>gi|254719795|ref|ZP_05181606.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984814|ref|ZP_06097549.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|264663406|gb|EEZ33667.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
          Length = 877

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P         +      +  +      K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 7   NPRVAEAHWQKVWEENRTFETDNSDSREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARY 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KRAKGFNV 74


>gi|238060613|ref|ZP_04605322.1| valyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882424|gb|EEP71252.1| valyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 529

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 54/202 (26%), Gaps = 37/202 (18%)

Query: 92  YLSPSYL----RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
            LS  Y      +      V+G  +  +         +     N TG +H+GH     + 
Sbjct: 14  TLSAQYQPGEVEQRRYEQWVAGGRFRASAQSDKPPFTVVIPPPNVTGSLHMGHAFEHTLM 73

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D L       G+                           +AL+    D        +  +
Sbjct: 74  DALTRRKRMQGF---------------------------EALWLPGMDHAGIATQNLVER 106

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            +  E   ++      F E  W    K  S  A++  +R     L    D          
Sbjct: 107 QLANEGLSRHDLGREKFVERVWQ--WKAESGGAILGQMR----RLGDAVDWKRERFTMDA 160

Query: 268 GDPSPIRDIIDNLARQGYVYEG 289
           G    ++ +   L   G +Y  
Sbjct: 161 GLSRAVQTMFKKLFDDGLIYRA 182


>gi|218782123|ref|YP_002433441.1| glutamyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218763507|gb|ACL05973.1| Glutamyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 468

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 95/294 (32%), Gaps = 61/294 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ-- 187
            +PTG +H+G  R A+     A  M                G  +  L  +   R  Q  
Sbjct: 10  PSPTGALHIGGARTALFNWLYARRM---------------GGTFVLRLEDTDKARSTQES 54

Query: 188 --ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL----PIVKDYSVQAM 241
             A++     L   +  G + +    E+  ++  +LL+     +       + +    AM
Sbjct: 55  VDAIFQGMEWLGIDWDEGPFYQSKRTEIYQQHIQKLLDEGNAYYCTCTPEELDEKRKAAM 114

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
            +  +        ++D    E    + + + +R                L  P++  T  
Sbjct: 115 ARGDK-------PKYDGTCREKGLEKCEGAVVR----------------LKAPQTGKTVF 151

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  +  + F +  +    D  + +SDGS TY    LA        G + +I   G DH 
Sbjct: 152 EDKVKGTIAFDNQELD---DLIIARSDGSPTYH---LAVVVDDITMGINTIIR--GDDHV 203

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
               R   +  A+              V +       ++SKR G    +  + +
Sbjct: 204 SNTPRQILLYNALGYPVPTFAH-----VPMVLGADKKRLSKRHGATSVVEYKDM 252


>gi|221134245|ref|ZP_03560550.1| leucyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 860

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  L   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 7   SPQSLEANVQQYWQDNACFAAQPDDSREKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRH 66

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 67  QRMLGKNV 74


>gi|71900312|ref|ZP_00682448.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
 gi|71729960|gb|EAO32055.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
          Length = 753

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +  I      S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 7   TYDPQRIESIAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 66

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 67  RYKRMTGHNV 76


>gi|294084713|ref|YP_003551471.1| isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664286|gb|ADE39387.1| Isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 933

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 110/329 (33%), Gaps = 43/329 (13%)

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +A  +   I++++          + D I++ +  +G       P  +         D ++
Sbjct: 481 RAWGVPLTIYVNKTTGEPLRDQKVHDRIVEAMRDEGADCWFSSPDERFLGQDYAVEDYEK 540

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRL 367
           +         D+      S  ++ +   +    +   E   D  +Y+ GSD   G+    
Sbjct: 541 V--------TDILDVWFDSGSTHAFVLEN----RDDLESPAD--LYLEGSDQHRGWFHSS 586

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              + +   K     VL    V    D    KMSK  G+ IT + ++++ G+D +R  ++
Sbjct: 587 LLQSCSTRGKAPYKGVLTHGFV---LDEQGRKMSKSLGNVITPQKIMEQNGADILRLWVV 643

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  L      ++  +           Y R R+  R           D F       
Sbjct: 644 SSDYYNDLRIGNEIIQRMTDN---------YRRFRNTLRYLLGA-----LDGFDDAERVD 689

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLR 546
            ++    E  ++  LAE    I   T   + + +   L+ L  S     +   R++    
Sbjct: 690 YADMPDLERWVLNRLAEIDANIRKMTENYDFHGIFTELHTLCNSDLSAFYFEIRKDR--- 746

Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLN 575
            +  ++   ++ R     A  +++    +
Sbjct: 747 -LYCDDPD-SIAR----RACRTVMAEIFD 769


>gi|260753146|ref|YP_003226039.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552509|gb|ACV75455.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 941

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 27/222 (12%)

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +Y+ GSD      +   + +  S   A    +L     L  DG   KMSK  G+ I    
Sbjct: 586 LYLEGSDQHRGWFQSSLLESCGSRGHAPYEAVLTHGFTL--DGTGRKMSKSVGNVIDPLK 643

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V++E G+D +R  +     +E +      +   S           Y + R+ FR      
Sbjct: 644 VINESGADILRMWVASTDYNEDVRISKEVLSGTSDG---------YRKLRNSFRYLLGA- 693

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA--- 529
                + F        ++    E  ++  LAE  + +  +       +   YL  L+   
Sbjct: 694 ----LEGFSEEEKVDLADLPELEKYILHLLAELDQALHESVNGFAFNR---YLRLLSDFV 746

Query: 530 -SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
            +     +   R++     V     + T  R     A  +++
Sbjct: 747 NNDLSAFFFDIRKDRLYCDVGEAAPQGTEER----RAYRTVL 784


>gi|302880066|ref|YP_003848630.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582855|gb|ADL56866.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 893

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ L +           +         K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PASLEQEAQKHWDDSGAFTATESSDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYH 66

Query: 155 AFSGYEVT 162
              G+ V 
Sbjct: 67  RMKGFNVM 74


>gi|227552723|ref|ZP_03982772.1| glutamate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257886074|ref|ZP_05665727.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257888691|ref|ZP_05668344.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897351|ref|ZP_05677004.1| glutamyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378887|ref|ZP_06625042.1| glutamate--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293553637|ref|ZP_06674261.1| glutamyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293572690|ref|ZP_06683658.1| glutamyl-tRNA synthetase [Enterococcus faecium E980]
 gi|227178123|gb|EEI59095.1| glutamate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257821930|gb|EEV49060.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257824745|gb|EEV51677.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833916|gb|EEV60337.1| glutamyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|291602212|gb|EFF32440.1| glutamyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291607276|gb|EFF36630.1| glutamyl-tRNA synthetase [Enterococcus faecium E980]
 gi|292642428|gb|EFF60583.1| glutamate--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 486

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 90/295 (30%), Gaps = 34/295 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A              + ND G  I  +  +   R    
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR-------------H-ND-GDFIIRIEDTDQKRN--- 50

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIR 246
           + + +    E             E   +Y     +  +E + P++     S +A      
Sbjct: 51  IEDGEKSQLENLAWLGMDWDESPENPGEYGPYRQSERKEIYQPLIDQLLASNRAYKCYCT 110

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +      E   + G   +   +       QG         P++      DM 
Sbjct: 111 EEELEAEREAQRARGEMPHYAGTCANLTPEEQAEKEAQGLESVVRFRVPRNTEYAFTDMV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           +  + F S  +G D    + K DG  TY       F    +     + +V+ G DH    
Sbjct: 171 KGAISFESDNIGGDF--VIQKRDGMPTYN------FAVAVDDHLMKITHVLRGDDHIANT 222

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   +  A              +  +       K+SKR    +       E+G 
Sbjct: 223 PKQLMIYEAFGWTPPTFGH----MTLIINSETGKKLSKRDESILQFIEQYRELGY 273


>gi|182415676|ref|YP_001820742.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842890|gb|ACB77142.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 857

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   +           L  + + L  DG   KMSK  G+
Sbjct: 576 LYVGGAEHAVLHLLYARFWHKVLFDLGVVPQSEPFTRLFHQGIILGEDGE--KMSKSRGN 633

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            +    ++   G+D++R  ++
Sbjct: 634 VVNPDTIIASHGTDTLRLYLM 654


>gi|225549500|ref|ZP_03770466.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369777|gb|EEG99224.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 480

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 115/338 (34%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYVFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   + V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++EN +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|28199117|ref|NP_779431.1| leucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28057215|gb|AAO29080.1| leucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 887

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 15  TYDPQRIESTAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 74

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 75  RYKRMTGHNV 84


>gi|33519922|ref|NP_878754.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|68565996|sp|Q7VRX4|SYM_BLOFL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33504268|emb|CAD83160.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 545

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 89/272 (32%), Gaps = 49/272 (18%)

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
           +  + L  +     + + E D  R +P     I +  ++  YV+  +  P     T K  
Sbjct: 209 LQEETLHKVKEWFKLGLKEWDISRNEPYFGFKIPNTSSKYFYVW--MDAPIGYMGTFKNL 266

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             + + +        +    L      Y +   D+ YF                  HS +
Sbjct: 267 CKKNKNILFEDFWSINSKVEL------YHFIGKDITYF------------------HSLF 302

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                A+  +   +K    + +   V L       K+SK   +FI +R  +  + SD +R
Sbjct: 303 ---WPAILESCQYRKPT-GIFVHGHVTL----NGSKISKSKNNFINVRTYLSHLNSDYLR 354

Query: 424 FMMLWRKNSELLDFDF--------------CKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +    + +S++ D D                K+   +  N  F  QY Y    +    + 
Sbjct: 355 YYYATKLSSKINDIDLNFNDFMLKVNADIINKILNLASRNSNFITQYNYGYLSNSLENSN 414

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
                +D       +  Q+ EF  +  +++  
Sbjct: 415 LYDFFIDAQYLIGKLF-QQREFSEAMRKIMQL 445


>gi|182681844|ref|YP_001830004.1| leucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130165|sp|Q87C65|SYL_XYLFT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238691042|sp|B2I5T5|SYL_XYLF2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|182631954|gb|ACB92730.1| leucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578093|gb|ADN62062.1| leucyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 7   TYDPQRIESTAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 66

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 67  RYKRMTGHNV 76


>gi|15594944|ref|NP_212733.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|224532694|ref|ZP_03673311.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|6831681|sp|O51545|SYC_BORBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2688519|gb|AAC66952.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi B31]
 gi|224512312|gb|EEF82696.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 480

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 62/338 (18%), Positives = 115/338 (34%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKTDFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   + V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++EN +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|330814064|ref|YP_004358303.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487159|gb|AEA81564.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 884

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 43/208 (20%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
                         K    +I     N TG +H+GH     + D L       GYE   +
Sbjct: 20  WEKKKYFKPIKNNNKKKYFSIVIPPPNVTGSLHMGHALNNTIQDLLIRFKRNQGYETLWQ 79

Query: 165 YYINDAG--AQINT---LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
              + AG   Q+     LAL+   R Q    N             ++K +  +   K  +
Sbjct: 80  PGTDHAGIATQMVVEKQLALAGKTRQQLGRKN-------------FIKEI-WKWKAKSGN 125

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           E+++                         LK L    D         +G    +  +  +
Sbjct: 126 EIVSQ------------------------LKKLGSSCDWSKERFTMDKGLSEAVTKVFVD 161

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRK 307
           L ++  +Y+ +         Q    D +
Sbjct: 162 LYKKKLIYKDLKLVNWDPVLQTAVSDLE 189



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  ++    +K    NV +  LV   RD    KMSK  G+
Sbjct: 488 TGFD-IIFFW-------VARMMMMSLYFMKKVPFSNVYVHALV---RDDKGQKMSKSKGN 536

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            I    +++E G+D++RF ++   +    D    K +    +N
Sbjct: 537 VIDPIVLINEYGADALRFTLIAMSSPGR-DVKLAKDRVNGYKN 578


>gi|110799452|ref|YP_697210.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209761|ref|ZP_02635386.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|110674099|gb|ABG83086.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170712061|gb|EDT24243.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 514

 Score = 41.8 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFDIFTRTDSEYHEEQVKYIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPIEGFEDKRVYVWIDALLAYVTASKKVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    ++ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|300788561|ref|YP_003768852.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299798075|gb|ADJ48450.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 58/196 (29%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P+     +    V+   +  +        +I     N TG +H+GH     + D ++  
Sbjct: 17  DPAAEEAPMYDRWVAAGYFTADASSGKPPFSIVLPPPNVTGSLHMGHALNHTLMDAMSRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV                           L+    D        V  + +  E 
Sbjct: 77  RRMQGYEV---------------------------LWLPGMDHAGIATQNVVERQLAGEG 109

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             ++     +   EK++  V ++  +   KI+   +K L    D               +
Sbjct: 110 LSRH-----DLGREKFVERVWEWKAEYGGKILGQ-MKRLGDGVDWSRERFTMDENLSKAV 163

Query: 274 RDIIDNLARQGYVYEG 289
           + +  N   +G +Y  
Sbjct: 164 QTVFKNFFDEGLIYRA 179



 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 30/221 (13%)

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +   +  +   V +   +       L  L RD    KMSK  G+ I     +D  G+D+
Sbjct: 490 LFFWVVRMMMFGVHQMDGKQPFDHVYLHGLIRDAQGKKMSKSRGNVIDPLEWMDAYGADA 549

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
            RF +    N      D     E +  +  F  +   A   ++   A    P        
Sbjct: 550 TRFTLARGANPGA---DMALADEWAAGSRNFCTKLWNATKFAMMNGASVAAP-------- 598

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY-----DLASVFHGHW 536
              +P   E   ++  ++  L      ++      +  K+A  LY     +L       +
Sbjct: 599 ---LPSAGELTEADRWILGRLGALVSEVDGLFEDFQFAKVAGALYQFTWNELCD----WY 651

Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
               E  +++  Q ++ +    R  L      ++++ L ++
Sbjct: 652 ---LELAKVQLYQGDDARAAATRSVL----GHVLDTVLRLL 685


>gi|126736211|ref|ZP_01751954.1| leucyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714377|gb|EBA11245.1| leucyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 847

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 26/123 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP+ +             +         K  +  +   P+G +H+GH R   +GD +A
Sbjct: 3   TYSPAEIEAKWQDAWADAQTFKAERSADKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIA 62

Query: 152 S--------LMAFSGYEVTR---EY-------------YIN--DAGAQINTLALSVFWRY 185
                    ++   G++      E              Y N  D  AQ+  L LS+ W  
Sbjct: 63  RYKLATGHNILHPMGWDAFGMPAENAAMASGGHPKDWTYSNIADMKAQMKPLGLSIDWSR 122

Query: 186 QQA 188
           + A
Sbjct: 123 EFA 125


>gi|90415956|ref|ZP_01223889.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90332330|gb|EAS47527.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 450

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 103/344 (29%), Gaps = 45/344 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                 +V +          +H+G+ R AVV DTL  L+           Y N       
Sbjct: 9   QPIDSQRVTMYVCGPTVYNRVHIGNARPAVVFDTLYRLLTSL--------YPN------- 53

Query: 176 TLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
                   +Y + + + +D  +      G  +  +    A+ Y  ++         P + 
Sbjct: 54  -------VQYARNITDIDDKIMKTAAELGEDISVLSTRYAEAYFDDMQAL--NNLPPTIV 104

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPP 293
            Y+ Q + + + D +  L  +   + SE          +   + ++A  G +    +   
Sbjct: 105 PYATQHIPE-MTDMISRLVAKEHAYESE--------GHVLFAVQSMADYGKLSGRSLDDM 155

Query: 294 PKSKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                 +     +      L   S       D P  +    +    + +       E+  
Sbjct: 156 LAGARVEVASYKKYAGDFILWKPSADDEPGWDSPWGRGRPGWHLECSAM------IEKHL 209

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
              I + G          E   A          V    +   + +    KMSK  G+F  
Sbjct: 210 GESIDIHGGGQDLIFPHHENEIAQSCCAHDGKPVANVWMHNGFINIEGEKMSKSLGNFRM 269

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           +  ++++   + +R+++L        +F    +    +     Y
Sbjct: 270 VNDLLEQYPGEVLRYVILSAHYRSEQNFGKDLLDSAWRSLDAIY 313


>gi|56551219|ref|YP_162058.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|81820925|sp|Q5NQQ7|SYI_ZYMMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56542793|gb|AAV88947.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 941

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 27/231 (11%)

Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           +Y  G    +Y+ GSD      +   + +  S   A    +L     L  DG   KMSK 
Sbjct: 577 RYGEGTRAQLYLEGSDQHRGWFQSSLLESCGSRGHAPYEAVLTHGFTL--DGTGRKMSKS 634

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I    V++E G+D +R  +     +E +      +   S           Y + R+
Sbjct: 635 VGNVIDPLKVINESGADILRMWVASTDYNEDVRISKEVLSGTSDG---------YRKLRN 685

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523
            FR           + F        ++    E  ++  LAE  + +  +       +   
Sbjct: 686 SFRYLLGA-----LEGFSEEEKVDLADLPELEKYILHLLAELDQALHESVNGFAFNR--- 737

Query: 524 YLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570
           YL  L+    +     +   R++     V     + T  R     A  +++
Sbjct: 738 YLRLLSDFVNNDLSAFFFDIRKDRLYCDVGEAAPQGTEER----RAYRTVL 784


>gi|315122106|ref|YP_004062595.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495508|gb|ADR52107.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 960

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 73/196 (37%), Gaps = 28/196 (14%)

Query: 353 IYVMGSDHS-GYVKRL--EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           +Y+ GSD   G+ +    E+ A   S        L+     +  +G   KMSK  G+ I 
Sbjct: 589 VYLEGSDQHRGWFQHSLLESCATRGSTP---FTSLITHGFAVDENGE--KMSKSKGNVIF 643

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
              ++ E G+D +RF ++     +          ++  +N +     AY + R+  R   
Sbjct: 644 PDTIISESGADILRFWVVNSDYHDD---------QRLGKNIIQTNIDAYRKLRNTIRWM- 693

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQ--LIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                    +   +   + S  D  EL+  ++  + E  + +  A    +   +   L +
Sbjct: 694 -------LGVLAHDTGKEPSLSDVPELERFILHRITELDQTVREAYDNFDFKTIVRTLMN 746

Query: 528 LAS-VFHGHWSHGREN 542
            ++      +   R++
Sbjct: 747 FSNFELSSFYFDIRKD 762


>gi|166154659|ref|YP_001654777.1| glutamyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155534|ref|YP_001653789.1| glutamyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335927|ref|ZP_07224171.1| glutamyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687384|sp|B0B818|SYE_CHLT2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|238687482|sp|B0BC83|SYE_CHLTB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|165930647|emb|CAP04144.1| glutamyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931522|emb|CAP07098.1| glutamyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 506

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 28/277 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           V+ +PTG  HVG    A+  +  A    ++G  + R    +   ++ +  A         
Sbjct: 10  VAPSPTGDPHVGTAYMALFNEVFAR--KYNGQMILRIEDTDQTRSRDDYEANIFSALKWC 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +  ++     G Y G Y +    E+  KY+  LL                         
Sbjct: 68  GIRWDEGPDVGGAY-GPYRQSERTEIYKKYAEILLQTD------------CAYKCFATPQ 114

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L+ +            + R       + +     QG  Y   L  P +  +   D  + 
Sbjct: 115 ELQEMRAVASTLGYRGGYDRRYRYLSPEEVRQREEQGQPYTIRLKVPLTGESVFEDQCKG 174

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +++F      D  D+ L+KSDG  TY  A++      +  G  +++   G +      + 
Sbjct: 175 RVVFP---WADVDDQVLVKSDGFPTYHFANV---VDDHLMGITHVLR--GEEWLSSTPKH 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +  A   +  Q        + L  DG   K+SKR 
Sbjct: 227 LLLYKAFGWEPPQF---FHMPLLLNPDG--SKLSKRK 258


>gi|42560851|ref|NP_975302.1| valyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400731|sp|Q6MTU2|SYV_MYCMS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42492347|emb|CAE76944.1| valine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320951|gb|ADK69594.1| valine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 872

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N       + K      +    +  ++     K +I     N TG +H+GH     + D
Sbjct: 5   LNPKYDHLQVEKDKYQYWLDKNLFKADINSNKPKFSIILPPPNVTGKLHIGHAWDTSLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +      +GY+    +        ++   +S   + +  L     D  +          
Sbjct: 65  AIIRFKKLTGYD--TLFLPG-----MDHSGISTQVKVEAKLKQQGID--KNKLGREKFLL 115

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              +  ++Y++ +     +  L +        + + I   +K + ++ 
Sbjct: 116 EAWKWKEEYANIIRKQWAKLGLSLDYSTEKFTLDEDINQIVKEIFVKF 163


>gi|222478802|ref|YP_002565039.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451704|gb|ACM55969.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 906

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 17/152 (11%)

Query: 346 ERGFDNMI---YVMGSDH-------SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           +R  D M    YV G +H       S +V ++ A    ++ ++   N+L   +V+L    
Sbjct: 531 DRANDWMPVDQYVGGIEHAVMHLLYSRFVTKVLADEEGLAHREPFTNLLAQGMVQL---- 586

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ ++ + +VDE G+D+ R  ++     E    DF   +E  K    F  +
Sbjct: 587 EGEKMSKSKGNTVSPQRIVDEYGADTARLFIMQAAQPER---DFDWAEEGVKSTHRFLAR 643

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                      +A+    D D D     V  +
Sbjct: 644 LTDLVEEYAAGEAETASSDADRDTIDDYVADE 675


>gi|167725508|ref|ZP_02408744.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 1021

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 516 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 575

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 576 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 618

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 619 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 675

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P    FD     L
Sbjct: 676 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLFDVDRYAL 723

Query: 499 IV 500
             
Sbjct: 724 AR 725


>gi|166711360|ref|ZP_02242567.1| glutamyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 467

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 67/298 (22%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQ--INTL 177
           + +PTG +H+G  R A+          G  +  +      +  RE        Q  I+ +
Sbjct: 8   APSPTGYLHIGGARTALYCWLEARRRGGQFVLRI-----EDTDRE-----RSTQAAIDAI 57

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             ++ W     L  +D  + +      Y + V ++L  +       +   + L  +++ +
Sbjct: 58  LEAMQWL---GLGYDDGPIYQTQRVARY-QEVAEQLLAQ-GKAYYAYETREELDAMREVA 112

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           +    K           +++    E +  +R DP+ +                    P  
Sbjct: 113 MAKQEK----------PRYNGAAREQNLPYRDDPNRV---------------IRFKNPIG 147

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            T    D+ + ++   ++ +    D  + + DG  TY   + A     ++ G   +I   
Sbjct: 148 GTVVFDDLIKGRIEIANSELD---DMVIFRPDGFPTY---NFAVVVDDWDMGITEVIR-- 199

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
           G DH     R   + AA+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 200 GDDHINNTPRQINIYAALGAPVPKFAHM-----PMILDEQGTKLSKRTGAADVMQYKD 252


>gi|308807252|ref|XP_003080937.1| tRNA synthetase class I (ISS) [Ostreococcus tauri]
 gi|116059398|emb|CAL55105.1| tRNA synthetase class I (ISS) [Ostreococcus tauri]
          Length = 985

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 63/218 (28%), Gaps = 35/218 (16%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N       + + L  +      +       G    I     N TG +H+GH     + D 
Sbjct: 63  NF--EHEQVEEGLYRMWEERGYFKPRSDAPGPPFVIPMPPPNVTGALHMGHAMFVTLQDV 120

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +                             S   R ++ L+   +D        V  + +
Sbjct: 121 MTR---------------------------SARMRGRKTLWLPGTDHAGIATQLVVERKL 153

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E       +  +   E+++  V ++  +   + I+  +K L    D          G 
Sbjct: 154 ESE-----GKKRTDMTREEFVERVWEWKAEYGGR-IQQQIKRLGASCDWSRERFTLDEGL 207

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              + +   +L  +G +Y+G      +   Q    D +
Sbjct: 208 SESVIEAFISLHERGLIYKGTYMVNWAPKLQTAVSDLE 245



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 13/155 (8%)

Query: 355 VMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           V+ + H   +      +  +      ++      L  L RD    KMSK  G+ +    V
Sbjct: 561 VLETGHDILFFWVARMIMMSYGM-TGKLPFHTVYLHGLVRDAQGRKMSKSLGNVVDPLGV 619

Query: 414 VDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQ 467
           + E G D++RF +       + L+ +  ++           N   +V Y+        R 
Sbjct: 620 ISEQGCDALRFTLATGTAPGQDLNLNLERLASNRNFTNKIWNAGKFVLYSLEEITHDERV 679

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           A      +D            ++   +E  ++  L
Sbjct: 680 AL-----VDEGAALCADAASIAKLPLAERWIVSKL 709


>gi|15888821|ref|NP_354502.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|25009368|sp|Q8UFA2|SYM_AGRT5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15156579|gb|AAK87287.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 516

 Score = 41.8 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 94/324 (29%), Gaps = 33/324 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     ++    
Sbjct: 16  PNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQTARAEGISPEELAQR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N     E           +++   +   +   +      +   +             +A 
Sbjct: 76  NSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKDSYAGWYSVRDEAY 135

Query: 242 MKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
                 +++A  +++        ++ E+ +          ++                  
Sbjct: 136 YAEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQEKLLKLYEENPDFIGPAERRNE 195

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-----Y 345
           +        +   + R    +   +  D      +  D    Y  A   Y + +      
Sbjct: 196 IISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYITA-TGYIEDRNGPRAK 254

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
               D  ++++G D    + R  AV        A++ +        +      KMSK  G
Sbjct: 255 YWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKGEKMSKSLG 308

Query: 406 DFITLRHVVDEVGSDSVRFMMLWR 429
           + +   ++V   G D VR+  +  
Sbjct: 309 NVVDPANLVAHFGLDPVRYFFMRE 332


>gi|329765327|ref|ZP_08256907.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138233|gb|EGG42489.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 463

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 101/310 (32%), Gaps = 37/310 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +V D L   +   G EV       D   +I           +  L N  ++ 
Sbjct: 34  HIGHARTIIVFDVLRKYLESKGIEVNFIQNFTDVDDKIIN---------RAKLENTTAEQ 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y   Y K        + S+        + +  ++++  + + K I     A   ++
Sbjct: 85  ISSKYIENYYKDFDGLNVKRASNYPK---ATEHIKDIENFIEKLIQKDI-----AYVSKN 136

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
            ++ S   F +      +  ID L        G             D     L   S + 
Sbjct: 137 GVYFSVSKFSQYG-KLSKKKIDELQS------GARIEVDEAKKDPLDF---ALWKFSNVK 186

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVS 375
               D P  K  G   +     A         FD    + G          E  +A + S
Sbjct: 187 PIW-DSPWGK--GRPGWHIECSAMSIKYLGENFD----IHGGGRDLIFPHHENEIAQSES 239

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               Q   +   +  +  +G   KMSK  G+  +++HV+D  G + +R   L    S+ +
Sbjct: 240 FTSKQFAKIWMHVGMVTINGE--KMSKSLGNIRSIKHVLDNWGPNVIRLFCLSGHYSKPI 297

Query: 436 DFDFCKVKEQ 445
           D+    +KE 
Sbjct: 298 DYSEELLKEN 307


>gi|325267139|ref|ZP_08133807.1| valine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981377|gb|EGC17021.1| valine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 960

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 73/268 (27%), Gaps = 42/268 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS L         +   Y      K    +I+    N TG +H+GH     + D LA  
Sbjct: 23  APSELESKHYQNWEAK-GYFSADFSKPESFSIQLPPPNVTGTLHMGHAFNQTIMDGLARY 81

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G         + AG  I T  +       Q L  +D                    
Sbjct: 82  YRMKGRNTCWIPGTDHAG--IATQIVVERQLAAQGLSRHD-------------------- 119

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                        EK+L  V ++   +    I   ++ +    D               +
Sbjct: 120 ----------LGREKFLEKVWEWKEVSG-GTITQQMRRVGCSADWSREYFTMDDTRAEAV 168

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
             +   L  QG +Y G        +L    S    +       +      + D+    ++
Sbjct: 169 TAVFVKLYNQGLIYRGKRLVNWDPVLGTAVSDLEVENVETEGSMWHIRYPLADNPAEAVV 228

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +         D+A      +  + ++I
Sbjct: 229 VATTRPETLLGDVAVAVHPEDERYTHLI 256


>gi|311070741|ref|YP_003975664.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871258|gb|ADP34733.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 466

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 129/428 (30%), Gaps = 67/428 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+V DT+ + + + GY+V    Y+++     + L      R   
Sbjct: 29  CGPTVYNYIHIGNARPAIVYDTVRNYLEYRGYDVQ---YVSNFTDVDDKLI-----RAAD 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L  +   + E +    Y + VG  L  K +       E        D  +  + ++I+ 
Sbjct: 81  ELGEDVPTISERFIK-AYFEDVG-ALGCKKADLHPRVTENM------DAIIDFVQELIKK 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F  G     +  ID L     +  G          +K D    
Sbjct: 133 GY-AYESDGDVYFKTRAF-EGYGKLSQQSIDELRSGARIRVGE---------KKEDALDF 181

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       D P  K    +    + +       ++     I +            
Sbjct: 182 ALWKAAKDGEISWDAPWGKGRPGWHIECSAM------VKKYLGEQIDIHAGGQDLTFPHH 235

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A       +       L   Y +    KMSK  G+F+ +  ++ +     +RF ML
Sbjct: 236 ENEIAQSEALTGKTFAKYW-LHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPQLLRFFML 294

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  +++    +     EN                + A +       +L  R     
Sbjct: 295 SVHYRHPINYSEELL-----ENT---------------KNAFNRLKTAYSNLLHRLNSST 334

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIA-----QEPYKLAFYLYDLASVFHGHWSHGREN 542
               D  E   +  + E+    E A                 L++LA   H ++    +N
Sbjct: 335 NLTADDDEW--LKKIEEHRTAFEEAMDDDFNTANAISI----LFELAK--HANYYLQEDN 386

Query: 543 PRLRFVQA 550
              + + A
Sbjct: 387 TADKVINA 394


>gi|296111172|ref|YP_003621553.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832703|gb|ADG40584.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 703

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 121/351 (34%), Gaps = 82/351 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVT----------------------REYYIND 169
           P+G + +G+    V+ D  A      G +V                          Y++ 
Sbjct: 48  PSGKLQLGNTYTTVLADAAARYHRLLGEDVHFLTGTDEHGLKIQQKAQAAGISEIDYLDG 107

Query: 170 AGAQINTL-----------ALSVFWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADK 216
               I TL             +   R+++A+    + L E    Y G Y       ++D+
Sbjct: 108 MAKDIKTLWSLMDISYDDFIRTTEDRHEKAVQKIFTTLLENDDIYKGEY--EGWYSVSDE 165

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAM---------MKIIRDDLKALNI-QHDIFISEDDFH 266
                  F E +   + +D     +         +++++++     + ++  ++ E  ++
Sbjct: 166 EY-----FTESQLAEVFRDEDGNMIGGKAPSGHEVELVKEEAYFFKMSKYADWLLE--YY 218

Query: 267 RGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  P  I+ +   N     ++  G+     ++ +    +          + GD+     +
Sbjct: 219 KSHPEFIQPEARMNEMINNFIAPGLEDLAVTRASVDWGIP---------VPGDEKHVIYV 269

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNM----IYVMGSD----HSGYVKRLEAVAAAVSEK 377
             D    Y  A L Y     E  FD      + ++G +    H+ Y      +  A+  +
Sbjct: 270 WIDALSNYITA-LGYDSDNTE-AFDKFWPANVQLVGKEIVRFHTIY---WPIMLHALGLE 324

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             +  +    LV   +DG   KMSK  G+ I    +    G D+VR+ +L 
Sbjct: 325 LPKSVIGHGWLVM--KDG---KMSKSKGNVIYPEVLEARYGLDAVRYYLLR 370


>gi|220908415|ref|YP_002483726.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782492|sp|B8HM05|SYL_CYAP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219865026|gb|ACL45365.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 858

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 95  PSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           P+ + +         GI+       K     +      P+G +H+GH R   + D +A +
Sbjct: 7   PTAIEEKWQQTWAEVGIDQTPTDRSKPKFYALSMF-PYPSGNLHMGHVRNYTITDVIARV 65

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 66  RRMQGYRV 73


>gi|242277727|ref|YP_002989856.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242120621|gb|ACS78317.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 884

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K           +  +    G   +I     N TG +H+GH     + D L       G
Sbjct: 16  EKKWLDHWEENKTFTPDPEADGDPYSIVIPPPNVTGVLHMGHALNITLQDILCRYQRQQG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                                      +  L+   +D        V  + +  E   +  
Sbjct: 76  ---------------------------KNVLWVPGTDHAGIATQNVVERQLKTEGKTRDD 108

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K+     ++K IR    +++   + F     F       +R +  
Sbjct: 109 LGREKFIERVWE--WKEEKGGHILKQIRRMGASVDWDRECF----TFDDQRAKAVRKVFV 162

Query: 279 NLARQGYVYEG 289
            L  +G +Y+G
Sbjct: 163 QLYEEGLIYKG 173


>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254765173|sp|B9MMM6|SYC_ANATD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 465

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 114/369 (30%), Gaps = 48/369 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DTL     + GYEV       D   ++                    +
Sbjct: 35  IHIGNARPLIVFDTLRRYFEYKGYEVIYIQNFTDVEDKM--------INRANKEGITVFE 86

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           L E +    Y K   +    + +       E +         +  + ++I     A  + 
Sbjct: 87  LAERFIQ-EYYKDADRLNVKRATKNPRATEEIED-------MIALIQRLIDKGY-AYVVD 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++     F        ++I + +A       G    P  K     D     L      
Sbjct: 138 GDVYFRTRKFAEYGKLSHKNIEELMA-------GARVDPNEKKEDPLDF---ALWKAKKE 187

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                  P  +    +    + +A    KY       I +            E   A   
Sbjct: 188 GEPAWSSPWGEGRPGWHIECSVMA---MKY---LGQTIDIHAGGQDLIFPHHENEIAQSE 241

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               +       L   Y +    KMSK  G+F T+R ++++   +++R  ML     + L
Sbjct: 242 AATGKPFARFW-LHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300

Query: 436 DFDFCKVKEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           +F    +++            EN  F +Q A +       +  D       +L  + +  
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSS-----ENDDKLKAAIEELKAKFIDA 355

Query: 487 QESEFDTSE 495
            E + +T+E
Sbjct: 356 MEDDLNTAE 364


>gi|225548609|ref|ZP_03769656.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370639|gb|EEH00075.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 480

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 62/338 (18%), Positives = 115/338 (34%), Gaps = 49/338 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  + GD L   + F GY+V     I D G     L               D   
Sbjct: 36  HIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLD-----------DGEDKVA 84

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +   + + ++           ++       +M  +   L+   I +
Sbjct: 85  KTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ-------L 309
                   F  G+         +         GI    K  T  + D+D+ +       L
Sbjct: 145 --------FSNGNVYFDTSCFKSYGEM----AGIDLIDKDMTLPRVDVDKFKRNKADFVL 192

Query: 310 LFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSG--Y 363
            F ++   D     D P       + Y +  L       E   D + I++ G DH G  +
Sbjct: 193 WFTNSKFKDQEMKWDSPW-----GFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHH 247

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSV 422
           +  +      +++K   + V    L+  Y      KMSK  G+FIT++ + D+       
Sbjct: 248 INEIAIAECFLNKKWCDVFVHGEFLIMDYN-----KMSKSRGNFITVKDLEDQNFSPLDF 302

Query: 423 RFMMLWRKNSELLDFDFC--KVKEQSKENPVFYVQYAY 458
           R++ L       L F     +  + ++EN +  + Y Y
Sbjct: 303 RYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFY 340


>gi|261602487|gb|ACX92090.1| valyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 816

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + +  LS      +   R+   K  +  I+      +G +H+GH     + DT+  
Sbjct: 23  IEEKWQKIWLSEEYWRDVFRFRDEDDKAPRFVIDTPPPFTSGELHMGHAYWVTIADTIGR 82

Query: 153 LMAFSGYEV 161
                GY V
Sbjct: 83  FKRLEGYNV 91



 Score = 37.6 bits (86), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    V++ G+D++R  +L     +   F + 
Sbjct: 530 FTTVLVNGQVLGPDGT--RMSKSKGNVVSPLDRVNDFGADAIRMALLDASIGDDFPFKWD 587

Query: 441 KVK 443
            VK
Sbjct: 588 IVK 590


>gi|116670794|ref|YP_831727.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|189082980|sp|A0JX57|SYL_ARTS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116610903|gb|ABK03627.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 843

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 96  SYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           + +      +     +    +   +  +  ++     P+G +H+GH     +GD +A  +
Sbjct: 27  AAMEAKWPQVWEDLKVFTPVDDGSRERRYVLDMF-PYPSGDLHMGHAEAFAMGDVVARYL 85

Query: 155 AFSGYEV 161
              GY+V
Sbjct: 86  RQKGYDV 92


>gi|15827774|ref|NP_302037.1| valyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230251|ref|YP_002503667.1| valyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|81537016|sp|Q9CBY7|SYV_MYCLE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13093326|emb|CAC30422.1| valyl-tRNA synthase [Mycobacterium leprae]
 gi|219933358|emb|CAR71566.1| valyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 886

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 70/241 (29%), Gaps = 42/241 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +  ++    ++   +  +        +I     N TG +H+GH     + D L   
Sbjct: 17  DPGAMESVIYQKWLNSGYFAADPASTKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L  N                     
Sbjct: 77  KRMQGYEVL-------WQPGMDHAGIATQSVVEKQLAIN--------------------- 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                    +F  E ++  V D+  ++    I   ++ L    D          G    +
Sbjct: 109 ----GKIKEDFGRELFVDKVWDWKRESG-GAIAGQMRRLGDGVDWSRDRFTMDDGLSRAV 163

Query: 274 RDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL-FRSTMVGDDVDRPL 324
           R I   L   G +Y          +L    S      D    +L+ FR   + DD    +
Sbjct: 164 RMIFKRLYDAGLIYRAERLVNWSPVLRTALSDIEVIYDEIEGELISFRYGSLDDDEPHIV 223

Query: 325 L 325
           +
Sbjct: 224 V 224



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 76/247 (30%), Gaps = 49/247 (19%)

Query: 346 ERGFDNMIYVMGSDHSGYV--KRLEAVAAAVSEKKA---------QINVLLCELVRLYRD 394
           E+ +   I V G D   +    R+  +   V    A         Q+      L  L RD
Sbjct: 477 EKFYPTSILVTGYD-ILFFWVARMMMLGTFVGGDDAITLGGCRGPQVPFTDVFLHGLIRD 535

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY 453
               KMSK  G+ I     +D  G+D++RF +    +    L      V+          
Sbjct: 536 EFGRKMSKSRGNVIDPLAWMDMFGADALRFTLARGSSPGGDLAIGEDHVRASRNFGT--- 592

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                        +  +       +      +P  +    ++  ++  L +    +++A 
Sbjct: 593 -------------KLFNATRYALLNGAALVPLPALTALTDADRWILGRLEQVRAEVDSAF 639

Query: 514 IAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ--LVHAVASII 570
              E  +    LY  A   F   +                 +L   +L   L H  A ++
Sbjct: 640 DGYEFSRACEALYHFAWDEFCDWY----------------LELAKAQLADGLTHTTA-VL 682

Query: 571 NSGLNII 577
            + L+ +
Sbjct: 683 AAALDTL 689


>gi|114567117|ref|YP_754271.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317896|sp|Q0AWK4|SYL_SYNWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114338052|gb|ABI68900.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 824

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  +      +        K    N+E     P+G +H+GH R   +GD +A   + +G
Sbjct: 12  AKWQAYWENKQLFKVEEDPEKPKYYNLEMF-PYPSGHLHMGHVRNYAIGDVVARFKSMNG 70

Query: 159 YEV 161
           + V
Sbjct: 71  FNV 73


>gi|332519935|ref|ZP_08396399.1| valyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044494|gb|EGI80688.1| valyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 878

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 53/209 (25%), Gaps = 33/209 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +       +   Y  +   +     I     N TG +H+GH     + D          
Sbjct: 12  AENKWYDYWTKNNYFHSTPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQD---------- 61

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                             L      + + A +   +D          +  + ++  DK  
Sbjct: 62  -----------------VLIRHARLQGKNACWVPGTDHASIATEAKVVAKLKEQGIDKND 104

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F    W         +    +I + LK L    D   ++          +  +  
Sbjct: 105 LTRDEFLAHAW------EWTEEYGGVILEQLKKLGCSCDWDRTKFTMDDDMSEAVIKVFV 158

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L  +G +Y G          +    D +
Sbjct: 159 DLHEKGLIYRGYRMVNWDPEAKTTLSDEE 187


>gi|299140905|ref|ZP_07034043.1| isoleucine--tRNA ligase [Prevotella oris C735]
 gi|298577871|gb|EFI49739.1| isoleucine--tRNA ligase [Prevotella oris C735]
          Length = 1211

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 112/307 (36%), Gaps = 55/307 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           +ND       L+ S FW     ++ +D  ++   G    +Y      E +        N 
Sbjct: 566 LNDW-----NLSRSRFWGTPLPIWRDDKRNEKCIGSLEELY---AEVEKSVAAGVMKSNP 617

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-DFHRGDPSPIRDIIDN---- 279
            ++K   +  DYS +   K+   DL    +   I ++E  +  + +   I    D+    
Sbjct: 618 LKDKGF-VPGDYSKENYDKV---DLHRPYVDDIILVNEAGEPMKRESDLIDVWFDSGSMP 673

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
            A+Q Y +EG +     K T K + + ++ L  ST  G  V            Y+ AD  
Sbjct: 674 YAQQHYPFEGEIASEGLKATGKSEEEYRRELVTSTYEGIPVP---------PAYYPAD-- 722

Query: 340 YFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                        I   G D   G+   L A++  V         ++   + L  D    
Sbjct: 723 ------------FINE-GVDQTRGWFFTLHAISTMV-FDHVAFKNVISTGLVL--DAKGN 766

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NP 450
           KMSK  G+      ++D+ G+D VRF M+      + L FD   V E  ++         
Sbjct: 767 KMSKHVGNVTNPFEMIDKYGADPVRFYMITNSEPWDNLKFDPNGVDETRRKLFGTLYNTY 826

Query: 451 VFYVQYA 457
            F+  YA
Sbjct: 827 SFFALYA 833


>gi|256061046|ref|ZP_05451202.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325047|ref|ZP_05964244.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301027|gb|EEY04524.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 910

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 12/148 (8%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           DE G+D++RF + +       +  D  ++                 +  +  R A+    
Sbjct: 570 DEYGADALRFTLAIMAAQGRDVKLDPARIAGYRNFGT---------KLWNATRFAQMNGV 620

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVH 501
            L  D  P N     + +  +EL L   
Sbjct: 621 KLAPDFRPENAKLAVNRWILTELTLATR 648


>gi|255320934|ref|ZP_05362108.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380213|ref|ZP_06073368.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302103|gb|EET81346.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298407|gb|EEY86321.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGR----NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    +  +        +G    I  +   P+G +H+GH R   +G
Sbjct: 4   HIDPEYQASAIEPQVQQDWDNRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIG 63

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 64  DVISRFYRLKG 74


>gi|53803851|ref|YP_114527.1| valyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81823617|sp|Q606C1|SYV_METCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53757612|gb|AAU91903.1| valyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 921

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 61/224 (27%), Gaps = 43/224 (19%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +       +   +    +G+G    I     N TG +H+GH     V D L    
Sbjct: 7   PHAIEQRWYQHWEASGFFA--PVGEGAPYCIMIPPPNVTGSLHMGHAFQDTVMDVLIRYH 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                    E    GV          
Sbjct: 65  RMKGDRTLWQAGTDHAGIATQMVV-------------------ERQLAGV---------- 95

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   E ++  V  +   +   I R  L+ +    D          G    +R
Sbjct: 96  ---GQTRHDLGREAFIERVWQWKETSGGTITRQ-LRRMGASLDWSRERFTLDEGLSRAVR 151

Query: 275 DIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
           ++   L  +G +Y G        +L    S      + ++  L 
Sbjct: 152 EVFVRLYEEGLIYRGKRLVNWDPVLHTAVSDLEVISEEEQGHLW 195


>gi|51246452|ref|YP_066336.1| leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|60390691|sp|Q6AJZ7|SYL_DESPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50877489|emb|CAG37329.1| probable leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 827

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 23/72 (31%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N       +             Y         K  +  +   P+G +H+GH R   +GD 
Sbjct: 6   NARYDFKTIESKWQKNWAENKTYSVTEDEDKEKYYLLEMFPYPSGRIHMGHVRNYTIGDV 65

Query: 150 LASLMAFSGYEV 161
           +A      G+ V
Sbjct: 66  VARYKRMRGFNV 77


>gi|15612145|ref|NP_223797.1| valyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135055|sp|Q9ZK61|SYV_HELPJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4155674|gb|AAD06660.1| VALYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 872

 Score = 41.8 bits (97), Expect = 0.36,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 100/326 (30%), Gaps = 43/326 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           KG +  +     N TG +H+GH     + D L       GY+   +  ++ AG  I T  
Sbjct: 38  KGKRFCLMMPPPNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG--IATQN 95

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q +   D                  E  +K    +L   +   +      + 
Sbjct: 96  VVEKQLLSQGVKKED-------LGREKFIQKVWEWKEKSGGAILEQMKRLGVSTAFSRTR 148

Query: 239 QAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQGYVYEGILP 292
             M K ++  +K A    ++  +   D +  +       + DI ++   R+G +Y     
Sbjct: 149 FTMDKGLQRAVKLAFLKWYEKGLIVQDNYMVNWCTKDGALSDIEVEYEERKGALYYIRYY 208

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDGSYTYFAADLAYFKC----- 343
               K        R + LF  + +     D+  + L+            +          
Sbjct: 209 LENQKDYLVVATTRPETLFGDSAIMVNPNDERYKHLVGQQVILPLINRTIPIIADAHVEM 268

Query: 344 -------KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL----Y 392
                  K   G D   Y +G  H     ++        ++K  +N    E   L     
Sbjct: 269 GFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF-------DEKGILNAHCGEFENLERLEA 321

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVG 418
           RD +   + + A     +   V +VG
Sbjct: 322 RDKVVAALKENA-LLEKIEEHVHQVG 346


>gi|114571496|ref|YP_758176.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122314962|sp|Q0AKF5|SYL_MARMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114341958|gb|ABI67238.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 865

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            +    +              K     +E     P+G +HVGH R   +GD +A      
Sbjct: 13  WQSAWDACDAFKAIGPSASNNKPKYYVLEMF-PYPSGRIHVGHSRNYTMGDVVARYKRAR 71

Query: 158 GYEV 161
           G++V
Sbjct: 72  GFDV 75


>gi|82701645|ref|YP_411211.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123768294|sp|Q2YBQ2|SYL_NITMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82409710|gb|ABB73819.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 866

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +      +  K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PQEIESEAQQYWQQTAAFKAVEAPEKRKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYH 66

Query: 155 AFSGYEV 161
              GY V
Sbjct: 67  RMQGYNV 73


>gi|15838767|ref|NP_299455.1| leucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9107316|gb|AAF84975.1|AE004031_7 leucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 887

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 15  TYDPQRIESTAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 74

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 75  RYKRMTGHNV 84


>gi|14285780|sp|Q9PBG8|SYL_XYLFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 879

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +         S   +  N      K     +   P+G +H+GH R   +GD ++
Sbjct: 7   TYDPQRIESTAQHYWDSTHAFEVNEHSNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVIS 66

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 67  RYKRMTGHNV 76


>gi|120553794|ref|YP_958145.1| isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166229746|sp|A1TYY9|SYI_MARAV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120323643|gb|ABM17958.1| Isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 939

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 103/318 (32%), Gaps = 49/318 (15%)

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK------IIRDDLKALNI 254
           Y       +  +  +  +  L      +W+P      ++AM +      I R     + I
Sbjct: 418 YRATPQWFISMDKLNLRADALEAIKGVRWVPAWGQNRIEAMFEQSPDWCISRQRTWGVPI 477

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQG-----YVYEGILPPPKSKTTQKCDMDRKQL 309
              I     + H      I  +   +   G      + +  L    +   +K  +D   +
Sbjct: 478 TLFIHKETQELHPNTQELIEKVAQAVETGGIDAWYDIDQNELLGADADQYEKV-LDTLDV 536

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHS-GYVKRL 367
            F S +  D V R                     + E G F   +Y+ GSD   G+ +  
Sbjct: 537 WFDSGVTHDSVLRV--------------------REELGQFPADMYLEGSDQHRGWFQSS 576

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              + A++       VL         D    KMSK  G+ I  + V++E+G+D +R  + 
Sbjct: 577 LKTSIAMNGVAPYKQVLTHGF---TVDAKGYKMSKSLGNVIAPQEVMNELGADILRLWVS 633

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD---LFPRNV 484
               S  +      +++ +           Y R R+  R         D D   + P ++
Sbjct: 634 ATDYSGEMSVSKDILRQTADG---------YRRIRNTARFLLSNLTGFDPDQHMVAPEDM 684

Query: 485 IPQESEFDTSELQLIVHL 502
           I  +       LQL   L
Sbjct: 685 IALDRWMVDRALQLQNEL 702


>gi|293400597|ref|ZP_06644742.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305623|gb|EFE46867.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 799

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V       K +     L  + + L  +    KMSK  G+
Sbjct: 525 LYVGGAEHAVLHLLYARFWHKVLYDCGVVKTKEPFQKLFHQGMILGEN--NEKMSKSRGN 582

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            +    +V+  G+D++R   +
Sbjct: 583 VVNPDDIVESHGADALRVYEM 603


>gi|238028413|ref|YP_002912644.1| isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877607|gb|ACR29940.1| Isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 945

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 18/216 (8%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS--DGSYTYFAADLAYFK 342
            + E +    ++   +       + L        + +R  L    D   T++       K
Sbjct: 510 ELLEAVAERVEAGGIEAWQTLDARELLGDEANLYEKNRDTLDVWFDSGTTHWHVLRGSHK 569

Query: 343 CKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
              +   D  +Y+ GSD   G+       A+ +  +     +L         DG   KMS
Sbjct: 570 DALQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKALLTHGF---TVDGEGRKMS 624

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ I    V + +G++ VR  +     S  L      +K  ++          Y R 
Sbjct: 625 KSLGNGIDPHEVSNRLGAEIVRLWIASTDYSGELAISEEILKRVTEG---------YRRI 675

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
           R+  R       D D+         +  E D   + 
Sbjct: 676 RNTLRFLLANLSDFDYAKDALPAA-EWLEIDRYAIA 710


>gi|94263197|ref|ZP_01287014.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93456415|gb|EAT06535.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 91  LYLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +    + + +   S  +           G+     +E     P+G +H+GH R   +GD 
Sbjct: 6   IKYDFAAIEEKWRSRWLADKTWKVATEPGRAKYYVLEMF-PYPSGRIHMGHVRNYTIGDV 64

Query: 150 LASLMAFSGYEVT 162
           +A      G  V 
Sbjct: 65  VARYRRMCGDNVV 77


>gi|94266584|ref|ZP_01290267.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93452779|gb|EAT03314.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 91  LYLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +    + + +   S  +           G+     +E     P+G +H+GH R   +GD 
Sbjct: 6   IKYDFAAIEEKWRSRWLADKTWKVATEPGRAKYYVLEMF-PYPSGRIHMGHVRNYTIGDV 64

Query: 150 LASLMAFSGYEVT 162
           +A      G  V 
Sbjct: 65  VARYRRMCGDNVV 77


>gi|83941191|ref|ZP_00953653.1| valyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83847011|gb|EAP84886.1| valyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 1013

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV ++K    V +  LV   RD    KMSK  G+
Sbjct: 613 TGFD-IIFFW-------VARMMMMQYAVVDQKPFDTVYVHALV---RDEKGKKMSKSLGN 661

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 662 VLDPLDLIDEYGADAVRFTL 681



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 74/257 (28%), Gaps = 46/257 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +     ++ ++   SG         +    ++     N TG +H+GH     + D L 
Sbjct: 7   FDAAQAEARLYAAWEESGAFKAGANASRKETFSVMIPPPNVTGSLHMGHAFNNTLQDILV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++   +   + AG     +                               V +
Sbjct: 67  RWHRMRGFDTLWQPGQDHAGIATQMV-------------------------------VER 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH----- 266
           ELA K      +F  E +   V +   ++   II   LK L    D   +          
Sbjct: 96  ELA-KDGKRRTDFTREDFTAKVWEQKQKSGGTIIGQ-LKRLGTSLDWSRNAFTMSGAPGA 153

Query: 267 -RGDPSPIRDIIDN----LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             G+     D +      +  +G +Y G          +    D +              
Sbjct: 154 PAGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVESTEVDGHMWHFK 213

Query: 322 RPLLKSDG-SYTYFAAD 337
            PL  +DG +YTY   D
Sbjct: 214 YPL--ADGATYTYVEKD 228


>gi|83854681|ref|ZP_00948211.1| valyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842524|gb|EAP81691.1| valyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 978

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV ++K    V +  LV   RD    KMSK  G+
Sbjct: 578 TGFD-IIFFW-------VARMMMMQYAVVDQKPFDTVYVHALV---RDEKGKKMSKSLGN 626

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++DE G+D+VRF +
Sbjct: 627 VLDPLDLIDEYGADAVRFTL 646



 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 74/257 (28%), Gaps = 46/257 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + +     ++ ++   SG         +    ++     N TG +H+GH     + D L 
Sbjct: 7   FDAAQAEARLYAAWEESGAFKAGANASRKETFSVMIPPPNVTGSLHMGHAFNNTLQDILV 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G++   +   + AG     +                               V +
Sbjct: 67  RWHRMRGFDTLWQPGQDHAGIATQMV-------------------------------VER 95

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH----- 266
           ELA K      +F  E +   V +   ++   II   LK L    D   +          
Sbjct: 96  ELA-KDGKRRTDFTREDFTAKVWEQKQKSGGTIIGQ-LKRLGTSLDWSRNAFTMSGAPGA 153

Query: 267 -RGDPSPIRDIIDN----LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
             G+     D +      +  +G +Y G          +    D +              
Sbjct: 154 PAGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVESTEVDGHMWHFK 213

Query: 322 RPLLKSDG-SYTYFAAD 337
            PL  +DG +YTY   D
Sbjct: 214 YPL--ADGATYTYVEKD 228


>gi|91978499|ref|YP_571158.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91684955|gb|ABE41257.1| Isoleucyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 1001

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 25/173 (14%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP------LLKSDGSYTYFAAD- 337
            V + I      +      M+  +  F  ++  +D  +          S  S+ +   D 
Sbjct: 543 EVNKRIADAFVEEGADAWYMEGARDRFLGSLANEDWQKVDDILDVWFDSGSSHAFVLEDP 602

Query: 338 -----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVR 390
                LA  + K + G D ++Y+ GSD   G+      +  +   + +A  +V+L     
Sbjct: 603 VHFPGLAGIRRKVDGGADTVMYLEGSDQHRGWFHSS--LLESCGTRGRAPYDVVLTHGFT 660

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLD 436
           L   G   KMSK  G+ +  + V+ + G+D +R       +    R   E+L 
Sbjct: 661 LDEQGR--KMSKSIGNTVEPQKVIAQSGADILRLWVCATDYADDQRIGPEILK 711


>gi|307720718|ref|YP_003891858.1| Isoleucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978811|gb|ADN08846.1| Isoleucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 922

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 19/147 (12%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +YV GSD   G+ +    +++AV  K     VL         D    KMSK  G+ I   
Sbjct: 568 LYVEGSDQHRGWFQSSLFLSSAVEHKAPYKGVLTHGF---TVDEKGEKMSKSKGNVIAPE 624

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ E GS+ +R  +        L      +K+ S+          Y + R+ FR     
Sbjct: 625 KVLKEYGSEILRLWVASSDYQGDLKISQGILKQTSEN---------YRKLRNTFRIMLAN 675

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQL 498
             DL+      ++ P E   D  +  L
Sbjct: 676 INDLE------SLTPYEDMGDLDKWIL 696


>gi|288818154|ref|YP_003432502.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787554|dbj|BAI69301.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751755|gb|ADO45238.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 922

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 38/247 (15%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           DI   L+ +  + EG   P       K + D   + F S               GS    
Sbjct: 498 DIWFELSEKELLPEGYKCPNCGSEDFKKEEDILDVWFDS---------------GSSH-- 540

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
               A    +      +M Y+ GSD      +   + +  S  KA    +L     +   
Sbjct: 541 ----ACVLRRLGIDTADM-YLEGSDQHRGWFQSSLLESVASYSKAPYRAVLTHGFTVDEQ 595

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK  G+ I+ + ++ + G+D +R  ++    +E +      ++   ++      
Sbjct: 596 GR--KMSKSLGNVISPQEIIKQYGADILRLWVVSEDYTEDVKLGKSILQRIVED------ 647

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
              Y + R+  R         DF         Q   FD   +  +  L      I     
Sbjct: 648 ---YKKIRNTLRFLLANL--YDFSPQRSIAYHQLHHFDRWMMSYLQMLL---EEIGRFYR 699

Query: 515 AQEPYKL 521
               +++
Sbjct: 700 EYAFHRV 706


>gi|261840237|gb|ACY00003.1| leucyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 806

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     ++      K  +  +   P+G +H+GH R   +GD LA       Y
Sbjct: 9   KWQEFWWKNKSFEPKDDFNLPKKYILSML-PYPSGEIHMGHVRNYTIGDALARYYRLHHY 67

Query: 160 EV 161
            V
Sbjct: 68  NV 69


>gi|284991674|ref|YP_003410228.1| isoleucyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064919|gb|ADB75857.1| isoleucyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 1051

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 16/177 (9%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L AV   V E+ +  NVL    + L  DG   KMSK  G+ +    ++D  
Sbjct: 566 DQTRGWFYSLMAVGTLVFEQNSYENVLCLGHI-LAEDGR--KMSKHLGNILEPIPLMDRH 622

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G+D+VR+ ML   +     +   +V  ++    V  V   Y    S F    +     D 
Sbjct: 623 GADAVRWFMLAGGSP----WSARRVGHETLSEVVRKVLLTYWNTASFFTLYAETN-GWDP 677

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY----KLAFYLYDLAS 530
              P     +    D     L   LAE    +  A    +       +A ++ DL++
Sbjct: 678 TSSPAPAPAERPLLDR--WALA-TLAEVTEGVTAALEDFDTQGAGRLIAQFVDDLSN 731


>gi|225017096|ref|ZP_03706288.1| hypothetical protein CLOSTMETH_01021 [Clostridium methylpentosum
           DSM 5476]
 gi|224950135|gb|EEG31344.1| hypothetical protein CLOSTMETH_01021 [Clostridium methylpentosum
           DSM 5476]
          Length = 467

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 102/285 (35%), Gaps = 41/285 (14%)

Query: 136 MHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
           MHVG+ R A+    LA       ++     +  RE Y+     +     +    R    +
Sbjct: 1   MHVGNLRTALYAYLLAKKDGGTFILRIE--DTDRERYV-----EGAVDIIYNTLRKTGLI 53

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           ++   D+   Y  G Y++     +   Y+ +L+   E  +        ++ + KI +   
Sbjct: 54  WDEGPDIGGDY--GPYIQSERMGMFKDYALQLVEKGE-AYYCFCDKDRLEELRKIQQAS- 109

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
             +  ++D            P  I++ +D     G  Y      P   TT   D     +
Sbjct: 110 -NIAPKYDGHCR-----HLTPEEIQEKLDA----GVPYVIRQKMPLEGTTTFHDEVFGDI 159

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
              ++ +    D+ L+K+DG  TY   + A     +  G  ++  V G+++     +   
Sbjct: 160 TVENSTLD---DQILIKTDGMPTY---NFANVVDDHTMGITHV--VRGNEYLSSAPKYNL 211

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +  +   +      + C  V         K+SKR GD  +   ++
Sbjct: 212 LYKSFGWEPP--VYIHCPPVMKT---ATEKLSKRNGDA-SFEDLI 250


>gi|50553344|ref|XP_504083.1| YALI0E17919p [Yarrowia lipolytica]
 gi|49649952|emb|CAG79676.1| YALI0E17919p [Yarrowia lipolytica]
          Length = 514

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 95/305 (31%), Gaps = 33/305 (10%)

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
                +               F + +PTG +H+G  R A+     A +   +G  + R  
Sbjct: 36  ATDKKKTPNPAKQSQGPERTRF-APSPTGLLHLGSLRTALYNYLQAKV--TAGQFLLR-- 90

Query: 166 YINDAGAQINTL--ALSVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            + D   Q   +  A    ++    L    D     G   G Y +    ++  KY  +LL
Sbjct: 91  -VEDT-DQTRLVPGAEEHLYQTLDKLGIKADESPKVGGPYGPYKQSERSDIYRKYVDQLL 148

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                      KD      +  +RD  +AL     +  S   + R     +    +N   
Sbjct: 149 ESGHAYKCYCSKDR-----LDDLRDSARAL-----VPPSMASYDRKCAHGVASDSNNGE- 197

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
             YV     P      T +        + R+       D  LLKSDG  TY    LA   
Sbjct: 198 --YVVRFKAPDLYPSYTDELHGQVNIQVQRNANDTRFDDIVLLKSDGLPTYH---LANVV 252

Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +      +I   G +      +  A+  A      +        + L       K+SK
Sbjct: 253 DDHLMKITTVIR--GEEWMPSTPKHIALYEAFGWTPPRFVH-----IPLLTSVDNKKLSK 305

Query: 403 RAGDF 407
           R+GD 
Sbjct: 306 RSGDI 310


>gi|23097551|ref|NP_691017.1| glutamyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|30173159|sp|Q8EU02|SYE_OCEIH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|22775774|dbj|BAC12052.1| glutamate-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 489

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 103/294 (35%), Gaps = 34/294 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND-AGAQINTLALSVFWRYQQ 187
           + +PTG +H+G+ R A+     A    F G  + R    +D    +    +   + ++  
Sbjct: 10  APSPTGHLHIGNARTALFNYLYAK--HFDGKFIIRTEDTDDKRNVEGGEESQLKYLKWLG 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             ++  +D+  G   G Y +    ++  +Y +EL            K+ + +  M     
Sbjct: 68  LQWDEGADI--GGEYGPYRQTERLDIYQEYLNEL----------FAKNLAYKCYMTEDEL 115

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           + +    + +  +    +         + I+    +G         P++ T    D+ R 
Sbjct: 116 EAEREEQRQNGQVP--KYSGAHRDLTPEQIEQFEAEGRQPSIRFRVPENTTYTFNDLVRG 173

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTY-FAADLAYFKCKYERGFDNMIYVM-GSDHSGYVK 365
           ++ F S+  GD     ++K +G  TY FA  +     K          V+ G +H     
Sbjct: 174 KITFESSDFGDW---VIVKKNGIPTYNFAVAIDDHLMKIS-------DVLRGEEHISNTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A   +  +   +      L  +    K+SKR    +        +G 
Sbjct: 224 KQMMIFDAFGWEAPRYGHM-----TLILNEERKKLSKRDEHILQFIEQYRNLGY 272


>gi|291295734|ref|YP_003507132.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470693|gb|ADD28112.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 628

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 126/346 (36%), Gaps = 65/346 (18%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
               I++ +A P    H+GH    ++ D LA      GYE     ++         +A +
Sbjct: 7   ETAAIDYANAAP----HIGHVYEKIICDFLARFHRLDGYET---NFVTGTDEHGEKIARA 59

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQ 239
                Q+              P  ++ +V ++L    Y   L+++ +  ++    +   +
Sbjct: 60  AKNAGQE--------------PQAFVDYVSEQLFQPAYRRLLISYDD--YIRTTSERHKR 103

Query: 240 AMMKIIRDDLKALNIQH-----------DIFISEDDFHRG------DPSPIRD------- 275
            + +I+R   +A +I +           + F++E +   G      +P  +R        
Sbjct: 104 YVQEILRKVYEAGDIYYAEYEGLYSVGSERFVTEKELVNGVLPGDSEPPILRKEANYFFR 163

Query: 276 -------IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
                  +I+ L+    + +      +     K  +    +      V   +  P  ++ 
Sbjct: 164 MEKYRPWLIEYLSEHPDLIQPQAYRNEVLEMLKEPIGDLSISRPKDRVPWGIPIPWDENH 223

Query: 329 GSYTYFAADLAYF-----KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQIN 382
            +Y +F A LAY      +  +E+ + +  +V+G D    +      +  +      +  
Sbjct: 224 VTYVWFDALLAYASSLASRGLFEKFWPHAWHVIGKDILKPHAIFWPTMLKSAGLPIYKRL 283

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           V+   +  L  DG   KM K  G+ +    ++D+ G D++ + +L 
Sbjct: 284 VVHGHI--LAMDGR--KMGKSLGNAVDPLALLDKYGVDALHYALLR 325


>gi|256383708|gb|ACU78278.1| valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384539|gb|ACU79108.1| valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455763|gb|ADH21998.1| valine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 872

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N       + K      +    +  ++     K +I     N TG +H+GH     + D
Sbjct: 5   LNPKYDHLQVEKDKYQYWLDKNLFKADINSNKPKFSIILPPPNVTGKLHIGHAWDTSLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +      +GY+    +        ++   +S   + +  L     D  +          
Sbjct: 65  AIIRFKKLTGYD--TLFLPG-----MDHSGISTQVKVEAKLKQQGID--KNKLGREKFLL 115

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              +  ++Y++ +     +  L +        + + I   +K + ++ 
Sbjct: 116 EAWKWKEEYANIIRKQWAKLGLSLDYSTEKFTLDEDINQIVKEIFVKF 163


>gi|241951700|ref|XP_002418572.1| valine--trna ligase, mitochondrial precursor, putative; valyl-trna
           synthetase, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
 gi|223641911|emb|CAX43875.1| valine--trna ligase, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
          Length = 1113

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 50/194 (25%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+     +             I K    +I     N TG +H+GH     + DTL     
Sbjct: 161 SWYAWWETQGFFEPELTANGEIKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNR 220

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W  +Q   ++        Y          E  +
Sbjct: 221 MQGKTTLFIPGFDHAGIATQSVVEKQIWSKEQKTRHD--------YGREKFIGKVWEWKE 272

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y                           I++  K L   +D    +   +      + +
Sbjct: 273 EYHQR------------------------IKNQFKKLGSSYDWSREKFTLNPDLSQAVTE 308

Query: 276 IIDNLARQGYVYEG 289
               +   G +Y  
Sbjct: 309 AFVRMHEDGTIYRA 322


>gi|159042514|ref|YP_001541766.1| leucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157921349|gb|ABW02776.1| leucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 983

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +G+ +  N      K  I        GP H+GH R   VGD +A      G
Sbjct: 3   EKWQEEWYSNGV-FNANPSNSRPKFFITVPYPYIEGPPHMGHGRTFTVGDVVARFKRMMG 61

Query: 159 YEV 161
           Y V
Sbjct: 62  YNV 64


>gi|95930682|ref|ZP_01313416.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133334|gb|EAT14999.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 850

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
               +   S          K     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 13  AWQKAWADSNKFSVSEKSDKEKFYLLEMF-PYPSGRIHMGHVRNYSIGDVVARFKRLQGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|68171788|ref|ZP_00545131.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88658156|ref|YP_507592.1| leucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123736387|sp|Q2GG41|SYL_EHRCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67998789|gb|EAM85498.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599613|gb|ABD45082.1| leucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              + G         +     +E     P+G +H+GH R   +GD +A      G
Sbjct: 9   EQDIQGKWNFYTDAKQAQCYVLEMF-PYPSGNIHMGHLRNYTIGDVIARYKRACG 62


>gi|222824044|ref|YP_002575618.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782489|sp|B9KCS8|SYL_CAMLR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222539266|gb|ACM64367.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 809

 Score = 41.4 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K    I      +         K  I  +   P+G +H+GH R   +GD +A      
Sbjct: 8   IEKKWQKIWQEKEYFEPKDDFSLPKKYILSMFPYPSGRIHMGHVRNYSIGDAMARYYRKK 67

Query: 158 GYEV 161
           G+ V
Sbjct: 68  GFNV 71


>gi|319902175|ref|YP_004161903.1| Isoleucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417206|gb|ADV44317.1| Isoleucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 1163

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   +  + L FD   V+E  ++
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRK 760


>gi|325981616|ref|YP_004294018.1| glutamyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531135|gb|ADZ25856.1| glutamyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 464

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 98/279 (35%), Gaps = 41/279 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  + R   I D       L  S   +  QA
Sbjct: 8   APSPTGYLHIGGARTALFSWAYAR--KHGGQFILR---IED-----TDLERSTQ-QSIQA 56

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           + +  + L   Y  G + +        + + +LL   +  +      Y+ +  ++ +R+ 
Sbjct: 57  ILDGMAWLGLDYDEGPFYQMQRLARYHEVAEQLLENNQAYYC-----YATKEELEQMREQ 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++        D  +  P+ I+ +I             L  P        D  + +
Sbjct: 112 QLAAGLKPRYDGRWRDSRKTPPADIKPVI------------RLKNPLEGHVAFNDQIKGK 159

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +T +    D  LL+SDG  TY  + +       +    ++I   G DH     R  
Sbjct: 160 ITVANTELD---DLVLLRSDGVPTYNFSVV---IDDLDMNITHVIR--GDDHVNNTPRQI 211

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A++    +        V +       ++SKR G  
Sbjct: 212 NILKALNAPLPE-----YAHVPMILGANGERLSKRHGAV 245


>gi|239996928|ref|ZP_04717452.1| leucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 522

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  N   +  K     +   P+G +H+GH R   +GD ++  
Sbjct: 7   NPKDIEQRVQQYWEENQSFKANDDVEKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRF 66

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 67  QRMQGKNV 74


>gi|154251733|ref|YP_001412557.1| leucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|189030295|sp|A7HSL7|SYL_PARL1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154155683|gb|ABS62900.1| leucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 870

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + +   K        G    R+      K  +  +   P+G +H+GH R   +GD +A  
Sbjct: 7   ARAAEPKWQKIWEERGDFLMRDDADGKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARY 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KKARGFNV 74


>gi|116492070|ref|YP_803805.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102220|gb|ABJ67363.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 673

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 114/342 (33%), Gaps = 64/342 (18%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D  A      G +V      ++ G +I   A ++          
Sbjct: 16  PSGKLHIGNSYTTIACDAEARFQRLEGKDVFFLTGTDEHGLKIEQKAEAL---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                     P  Y+  + +++   +  +LL    +K++    DY  +A+ KI +  L  
Sbjct: 66  -------NTTPKAYVDGMAEDIKKLW--DLLEITNDKFIRTTDDYHEKAVQKIFQKLLDQ 116

Query: 252 LNI---QHDIFIS---EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +I   +++ + S   E+ F     + +    D     G    G       + +    M 
Sbjct: 117 GDIYLGEYEGWYSVSDEEYFTESQLAEVYRDADGNVTGGKAPSGNEVELVKEESYFFKMS 176

Query: 306 RKQLLFRST-MVGDDVDRPLLKSDGSYTYF----AADLAYFKCKYERG------FDNMIY 354
           +             +  +P  + +     F      DLA  +  ++ G        ++IY
Sbjct: 177 KYADWLLDYYQTHPNFIQPASRMNEMINNFIKPGLEDLAVTRTGFKWGVPIKNDPKHVIY 236

Query: 355 VM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD------ 394
           V               SD  G  K+   A    V ++  + + +   ++           
Sbjct: 237 VWIDALSNYITALGYSSDEDGNFKKFWPANVHMVGKEIVRFHTIYWPIMLHALGLEQPDQ 296

Query: 395 --------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                       KMSK  G+ I    +V   G D++R+ +L 
Sbjct: 297 IYGHGWLLMKDSKMSKSKGNVIYPETIVKNYGLDALRYYLLK 338


>gi|186684281|ref|YP_001867477.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689431|sp|B2J7T9|SYL_NOSP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|186466733|gb|ACC82534.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 871

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 92  YLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             +P+ + +    + +  G++   +   K     +      P+G +H+GH R   + D +
Sbjct: 4   RYNPAAIEEKRQKTWLELGLDKTPSASNKPKFYALSMF-PYPSGSLHMGHVRNYTITDVI 62

Query: 151 ASLMAFSGYEVT 162
           A      GY V 
Sbjct: 63  ARFKRMQGYRVI 74


>gi|331703258|ref|YP_004399945.1| Valine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801813|emb|CBW53966.1| Valine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 872

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N       + K      +    +  ++     K +I     N TG +H+GH     + D
Sbjct: 5   LNPKYDHLQVEKDKYQYWLDKNLFKADINSNKPKFSIILPPPNVTGKLHIGHAWDTSLQD 64

Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            +      +GY+    +        ++   +S   + +  L     D  +          
Sbjct: 65  AIIRFKKLTGYD--TLFLPG-----MDHSGISTQVKVEAKLKQQGID--KNKLGREKFLL 115

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
              +  ++Y++ +     +  L +        + + I   +K + ++ 
Sbjct: 116 EAWKWKEEYANIIRKQWAKLGLSLDYSTEKFTLDEDINQIVKEIFVKF 163


>gi|228475068|ref|ZP_04059796.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|228271053|gb|EEK12441.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
          Length = 916

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 97/309 (31%), Gaps = 57/309 (18%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRG 268
           K   ++L+  EE    +  D+    +  +IRD  +          +   +F +E+     
Sbjct: 418 KVRQDILDAIEETDFKV--DWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIM 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               +  + D     G            + EG   P         + D   + F S    
Sbjct: 476 TKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGS-- 533

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
               R +L++                + E  F   +Y  GSD   G+       A A  E
Sbjct: 534 --SHRGVLET----------------RPELHFPADLYFEGSDQYRGWFNSSITTAVATRE 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     +L    V    DG   KMSK  G+ I    VV + G+D  R  +        + 
Sbjct: 576 QAPYKFLLSHGFVM---DGEGKKMSKSLGNVIVPNQVVKQKGADIARLWVSSTDYLADVR 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++ +Q+ +         Y + R+  R       D +    P      E E    + 
Sbjct: 633 IS-DEILKQTSD--------VYRKIRNTLRFMLGNINDFN----PETDSVPEHELLEVDR 679

Query: 497 QLIVHLAEY 505
            L+  L E+
Sbjct: 680 YLLNRLREF 688


>gi|226193372|ref|ZP_03788980.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225934578|gb|EEH30557.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 115

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|167922294|ref|ZP_02509385.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 326

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|167914393|ref|ZP_02501484.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 326

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|167906072|ref|ZP_02493277.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 329

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 20  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 79

Query: 155 AFSGYEV 161
              GY V
Sbjct: 80  RMQGYNV 86


>gi|167897728|ref|ZP_02485130.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 332

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 20  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 79

Query: 155 AFSGYEV 161
              GY V
Sbjct: 80  RMQGYNV 86


>gi|167849131|ref|ZP_02474639.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 321

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 20  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 79

Query: 155 AFSGYEV 161
              GY V
Sbjct: 80  RMQGYNV 86


>gi|167827656|ref|ZP_02459127.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 317

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|167819286|ref|ZP_02450966.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 328

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 20  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 79

Query: 155 AFSGYEV 161
              GY V
Sbjct: 80  RMQGYNV 86


>gi|167742102|ref|ZP_02414876.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 313

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|124382713|ref|YP_001024595.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|238561164|ref|ZP_04609455.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|238525147|gb|EEP88576.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 1039

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|77919014|ref|YP_356829.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123729465|sp|Q3A4P8|SYL_PELCD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77545097|gb|ABA88659.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 851

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K             +    +     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 13  KWQKRWEQDRTFKAKEKDAREKYYLLEMF-PYPSGRIHMGHVRNYSIGDVVARFKRLQGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|332292426|ref|YP_004431035.1| valyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170512|gb|AEE19767.1| valyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 877

 Score = 41.4 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 68/252 (26%), Gaps = 40/252 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S   +           Y  +         I     N TG +H+GH     + D L    
Sbjct: 8   DSTQVEDKWYSYWMEHNYFHSTPDNREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRA 67

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + A   I T A  V    +Q +  +D                  E  
Sbjct: 68  RLLGKNACWVPGTDHA--SIATEAKVVARLKEQGIKKSD-------LTREEFLAHAWEWK 118

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y                          +I D LK L    D   +           + 
Sbjct: 119 EEYG------------------------GVILDQLKKLGASCDWERTAFTMDPAMSESVI 154

Query: 275 DIIDNLARQGYVYEG---ILPPPKSKTT----QKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
               +L  +G +Y G   +   P++KTT    +    +R+ LL+      +  D  L  +
Sbjct: 155 KTFVDLYDKGLIYRGYRMVNWDPEAKTTLSDEEVIHEERQGLLYYLNYKLEGSDETLTIA 214

Query: 328 DGSYTYFAADLA 339
                    D A
Sbjct: 215 TTRPETIFGDTA 226


>gi|332799462|ref|YP_004460961.1| leucyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697197|gb|AEE91654.1| leucyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 816

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       + I        K     +E     P+G +H+GH R   +GD +A     +G+
Sbjct: 11  KWQKKWEENKIYKTSEDYNKPKYYCLEMF-PYPSGNLHMGHVRNYSIGDVVARFKRMNGF 69

Query: 160 EV 161
            V
Sbjct: 70  NV 71


>gi|328955671|ref|YP_004373004.1| glutamyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455995|gb|AEB07189.1| glutamyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 493

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 99/289 (34%), Gaps = 38/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R    N        + LS  
Sbjct: 10  APSPTGRLHIGGARTAIYNWAFARSRGGTFILRIDDTDPARSTEEN------TRVILSAM 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R+    ++   ++  G   G Y +    +L  + +  L++  E  +      +   A +
Sbjct: 64  -RWLGLDWDEGPEI--GGQAGPYSQAERLDLYREAAMRLVSQ-ERAYPC----FCTPAQL 115

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              RD  +A    +  +         DP   RD I    R G  +   +  P  +     
Sbjct: 116 AAERDAARARRDPYQGYN--RSCRGIDPDEARDRI----RAGEPHTLRIKVPLDRGDVVI 169

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           +      +  +    DD    ++++DG+ TY   + A        G  ++I   G DH  
Sbjct: 170 EDAVHGSVSFAAKELDDF--VIMRTDGTPTY---NFATVVDDALMGITHVIR--GDDHLS 222

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R      A+    A + V     + L  DG   K+SKR G      
Sbjct: 223 NTPRQVIAYEALG---ATVPVFAHISMILGEDGR--KLSKRHGATSVEE 266


>gi|327193417|gb|EGE60316.1| methionyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 519

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 99/328 (30%), Gaps = 41/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q     
Sbjct: 19  PNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGITAQALADR 78

Query: 192 NDSDLPEGYYP----GVYLKHVGKELADKYSSELLNFPEEKWLPIVKD-------YSVQA 240
           N  +                   +E   + S  + N   E    I KD          +A
Sbjct: 79  NSGEFEAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENG-DIYKDSYAGWYSVRDEA 137

Query: 241 MMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
             +    +L+A  +++        ++ E  +          ++ +               
Sbjct: 138 YYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHYEANPDFIGPAERRN 197

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
            +        +   + R    +   +  D      +  D    Y  A   Y + +     
Sbjct: 198 EVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYITA-TGYIEDRNGPRA 256

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                D  ++++G D    + R  AV   A  +S K      +      L +     KMS
Sbjct: 257 KYWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG---EKMS 307

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +   ++V+  G D VR+  L  
Sbjct: 308 KSLGNVVDPVNLVNHFGLDQVRYFFLRE 335


>gi|319407774|emb|CBI81421.1| Leucyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    K   +I      +     G+  K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRAQEKKWQAIWDEKKIFQVADNGEHEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFHV 74


>gi|257464108|ref|ZP_05628491.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061625|ref|ZP_07926110.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 931

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +           +L    V    DG   KMSK  G+ +   
Sbjct: 559 LYLEGSDQHRGWFQTSLLTSVGSRGTAPFKKILTHGFVN---DGKGEKMSKSKGNVVAPE 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R         E +      VK+ ++          Y R R+  R     
Sbjct: 616 KIIKQYGADILRLWCASVDYREDVKISDNIVKQMAE---------TYRRVRNTARYILGN 666

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               D     ++ +P +   +  +  L   L    + +  +    E
Sbjct: 667 SYGFD---PKKDAVPYQDLLEIDKWALHK-LEMLKKSVGESYEKYE 708


>gi|163868119|ref|YP_001609323.1| glutamyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|226710853|sp|A9ISQ6|SYE1_BART1 RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|161017770|emb|CAK01328.1| glutamyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 476

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 60/307 (19%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I   + +PTG +H+G  R A+     A              +          + L +  
Sbjct: 3   VITRFAPSPTGFLHIGGARTALFNWLYAK-------------HTG------GKMLLRIED 43

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--- 240
             ++                + L + G  ++    +E      E+ +   K Y   A   
Sbjct: 44  TDRERSTEAAVRAIIDGLHWMGLSYDGSPISQFERAERHRQIAEQLVENGKAYYCYASPE 103

Query: 241 MMKIIRDDLKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
            +  +R+  +A     ++D      D H   P  I+ +I             +  P+   
Sbjct: 104 ELAEMREKARAEGRPPRYDGRWRNRD-HSEAPQGIKPVI------------RIKAPEDGE 150

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D  +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I   G 
Sbjct: 151 TIVHDRVQGDVRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGVTHIIR--GD 202

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     R   +  A+      I V+    +    +G   K+SKR G           +G
Sbjct: 203 DHLTNAARQTIIFKAMGWD---IPVMAHIPLIHGENGA--KLSKRHG----------ALG 247

Query: 419 SDSVRFM 425
            D+ R M
Sbjct: 248 VDAYRTM 254


>gi|45358147|ref|NP_987704.1| valyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74555235|sp|Q6LZP0|SYV_METMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|44920904|emb|CAF30140.1| Valyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 886

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K +         +      K     I+     PTG MH+GH       D +A     +
Sbjct: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+                    V +      +   +++       +    + +    ++
Sbjct: 71  GYD--------------------VLFPQGWDCHGLPTEVKVEELNNITKSDIDRH---EF 107

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
               +   +E              ++ +R  +++L I  D    + ++   +P  +R   
Sbjct: 108 RRLCVELTDEN-------------VEKMRGQVRSLGISID---WDREYITMNPDYVRKSQ 151

Query: 276 -IIDNLARQGYVYEGILP 292
                +  +G +Y G  P
Sbjct: 152 TAFLKMYEKGLIYRGKHP 169


>gi|328477979|gb|EGF47895.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 585

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 79/265 (29%)

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY----------EGI 290
           M   I+   K L I +D FI      +     +++I++ L +QG VY          E  
Sbjct: 1   MAAQIKQLWKMLEITNDKFI--RTTDKEHVEAVQEIVERLIKQGDVYLGEYTGWYSVEDE 58

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDV----------------DRPLLKSDGSYTYF 334
               +S+ ++       +++      G +V                DR L   D    + 
Sbjct: 59  EYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTDRLLKYYDEHPDFV 118

Query: 335 -----------------AADLAYFKCKYERG------FDNMIYVM--------------G 357
                              DLA  +  +  G        +++YV                
Sbjct: 119 QPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVDALLNYITALGYGS 178

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--------------GMPIKMSKR 403
           +DH+ + K   A    + ++  + +++   ++ +  D                  KMSK 
Sbjct: 179 NDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAHGWLVMKDGKMSKS 238

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLW 428
            G+ I    +V+  G D++R+ ++ 
Sbjct: 239 KGNAIYPDMIVERYGLDALRYYLMR 263


>gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 845

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 87/270 (32%), Gaps = 37/270 (13%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N     +           +     +    K     +E     P+G +H+GH R   +GD 
Sbjct: 5   NF---KTVEENWQKYWEKNKTFSTKLDKSKKKFYCLEMF-PYPSGKIHMGHVRNYTIGDV 60

Query: 150 LASLMAFSGYEV--------------------------TREYYINDAGAQINTLALSVFW 183
           LA   +  GY V                            E  I++  +Q+  L LS+ W
Sbjct: 61  LARYKSLQGYNVLHPMGWDSFGMPAENAARQNNLSPKDWTESNISNMKSQLKRLGLSIDW 120

Query: 184 -RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            R       +     + ++  +Y K +        + + ++        ++     ++  
Sbjct: 121 DREISTCSVDYYKHQQEFFLELYDKGLVYRKEQDVNWDPVDQTVLANEQVIDGKGWRSGA 180

Query: 243 KIIRDDLKALNIQHDIFISE--DDFHRGD--PSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           ++ R  L         F +E  +     D  P+ ++ +  N   + +  E   P   SK 
Sbjct: 181 QVERKKLNQWFFNITKFSNELLESLDTLDQWPNKVKIMQKNWIGKSFGCEVKFPISSSKD 240

Query: 299 T--QKCDMDRKQLLFRSTMVGDDVDRPLLK 326
               KC   R   LF  + +   VD PL K
Sbjct: 241 VREIKCFTTRPDTLFGLSFLALSVDHPLSK 270


>gi|254166931|ref|ZP_04873785.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596106|ref|YP_003482802.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624541|gb|EDY37102.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533893|gb|ADD08240.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 455

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 9/74 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R A++ D     + + GY+V     I D   +I              L  +  ++
Sbjct: 36  HIGHARPAILFDIFRRFLEYMGYDVILISNITDVDDKI--------INKANELGKDPIEM 87

Query: 197 PEGYYPGVYLKHVG 210
              YY   YLK + 
Sbjct: 88  A-HYYAREYLKDMD 100


>gi|221133507|ref|ZP_03559812.1| valyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 923

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 67/239 (28%), Gaps = 37/239 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + +           +  +  G    + +     N TG +H+GH     + D L 
Sbjct: 4   TFNPSDIEQACYKAWEDKGYFKASGHGDPYCILL--PPPNVTGNLHMGHAFQHTIMDALT 61

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 62  RYHRMKGDNTLWQCGTDHAGIATQMV-------------------------------VER 90

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  K      +   E ++  + ++  ++    I   ++ L    D             +
Sbjct: 91  QLNAK-GQTRHDLGREAFVDKIWEWKEESG-GNISQQMRRLGTSPDWSREAFTMDDDLSN 148

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            ++++   L  +G +Y G               D + L          +  PL  +DGS
Sbjct: 149 AVQEVFVKLHEEGLIYRGKRLVNWDPVLLTAVSDLEVLNEEENGHMWHMRYPL--ADGS 205


>gi|147678155|ref|YP_001212370.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274252|dbj|BAF60001.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 932

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 76/226 (33%), Gaps = 31/226 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + + AV+ +     VL    V    D    KMSK  G+ I   
Sbjct: 558 LYLEGSDQHRGWFNSSLSTSVAVTGQAPYRMVLTHGFVV---DEQGRKMSKSLGNVIDPA 614

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+ ++G+D +R  +        L      +K+ ++         +Y + R+  R     
Sbjct: 615 KVIKQMGADILRLWVSSADYRGDLAVSQNILKQMTE---------SYRKIRNTCRFLLGN 665

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D D     R    Q  E D     L+  L +  + +  A    E + +  Y       
Sbjct: 666 LYDFDPA-GDRVEYGQMHEVDR--WALVR-LQKLIQKVIAAYRNYEYHVV--Y-----HA 714

Query: 532 FHGHWSHGRENPRLRFVQA---NNRKLTMMRLQLVHAVASIINSGL 574
            HG          L  ++         +  R     A  +++   L
Sbjct: 715 VHGFCVVDMSALYLDIIKDRLYTAPARSTAR----RAAQTVLYEVL 756


>gi|86605229|ref|YP_473992.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86553771|gb|ABC98729.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 912

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 80/239 (33%), Gaps = 32/239 (13%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              GFD +I+         V R+  +         QI      +  L RD    KMSK  
Sbjct: 502 MSTGFD-IIFFW-------VARMAMMGVQF---TGQIPFKDVYINGLVRDEHGAKMSKSK 550

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I    ++D+ G+D++R+ ++        D      ++  +   V   +    +  + 
Sbjct: 551 GNGIDPIELLDKYGTDALRYALVKEVVGAGQDIRLAYDRKTGESASVEAARNFANKIWNA 610

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKL- 521
            R     F  L+ +      +   +      L+L     L+             E Y L 
Sbjct: 611 SR-----FVLLNLEGQTPAQLGSPA---PEALELADRWILSRLHSTATQVIEELEAYGLG 662

Query: 522 --AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             A  LY L    F   +      PRLR     +++     L       S++ + L ++
Sbjct: 663 EGARLLYSLIWDDFCDWY-IELVKPRLRREDPTSKRTAQQVLA------SVLETILRLL 714


>gi|84489722|ref|YP_447954.1| glutamyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|115305772|sp|Q2NFU2|SYE_METST RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|84373041|gb|ABC57311.1| GltX [Methanosphaera stadtmanae DSM 3091]
          Length = 563

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 21/104 (20%)

Query: 51  MILSR--PLGLDPL---TIAELIVAR---IKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102
           M++S+   +  DP     +A  +VA+   +  +     V   G              +  
Sbjct: 30  MVMSKNPEMRKDPKTVSQLAGKLVAKVNNLTPEEQQKEVESLGG------------LEQH 77

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +               +  KV + F + NP+GP+H+GH R A++
Sbjct: 78  TKKEEKPKGLPELKNTEDKKVTLRF-APNPSGPLHIGHARAAIL 120


>gi|45190268|ref|NP_984522.1| AEL338Cp [Ashbya gossypii ATCC 10895]
 gi|44983164|gb|AAS52346.1| AEL338Cp [Ashbya gossypii ATCC 10895]
          Length = 533

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 97/287 (33%), Gaps = 37/287 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+    LA       L+     +  R   ++DA   I      + 
Sbjct: 48  APSPTGYLHLGSLRTALYNYLLARNTNGQFLLRLEDTDQKRL--VSDAEQNIYDTLQWLG 105

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            ++ +    N+         G Y +     +   ++ +LL             +  +  +
Sbjct: 106 IQFDEGPGVNEV-------YGPYRQSDRSAIYKAHADKLLASGHAYRC-----FCSKERL 153

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +R    AL    ++      + R   +  ++ ID+   Q   +      P      + 
Sbjct: 154 ENLRTSAMALQPPTNV-----SYDRECANLSQEHIDHKLDQNVPFTLRFKSPAVYEPFED 208

Query: 303 DMDRKQLLFRSTMVGD--DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
            +  +  L   T   D    D  L+KSDG  TY  A++      +     ++I   G + 
Sbjct: 209 LLHGRVDLQPQTNPNDIRYDDPVLMKSDGLPTYHFANV---VDDHLMKITHVIR--GEEW 263

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                +  ++  A      +        + L       K+SKR GD 
Sbjct: 264 LPSTPKHISLYRAFGWTPPKFVH-----IPLLTTAADKKLSKRKGDA 305


>gi|134300354|ref|YP_001113850.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189082997|sp|A4J7H2|SYL_DESRM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134053054|gb|ABO51025.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 827

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           Y      +  K     +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEKKWQEDWNKENTYQVPDFSERPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQ 69

Query: 158 GYEV 161
           GY+V
Sbjct: 70  GYDV 73


>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 495

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 103/322 (31%), Gaps = 73/322 (22%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-------NTLALSVFWRYQQAL 189
           HVGH R  VV D +A  +  SG+EV     I D   +I            ++  RY QAL
Sbjct: 37  HVGHARVMVVFDVVARYLRASGFEVMYVRNITDIDDKIIHRANEKGESIHALTARYIQAL 96

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           + +++ L                            P+ +        S++A++ ++R  L
Sbjct: 97  HEDEASLQILP------------------------PDREPRAT---ESMEAILAMVRQLL 129

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +               ++G+   I   + +    G +                D+   + 
Sbjct: 130 EQGYA-----------YQGENGDIYYDVSHFEGYGAL----------SGKHLEDLRAGER 168

Query: 310 LFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           +  +    D +D  L K+              G   +     A    +    FD    + 
Sbjct: 169 VQVNEAKTDPLDFVLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFD----IH 224

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G          E   A  SE       +   +   +      KMSK  G+F T+R V++ 
Sbjct: 225 GGGQDLQFPHHENEIAQ-SEAATGSKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLEH 283

Query: 417 VGSDSVRFMMLWRKNSELLDFD 438
              + +R+ +L       L++ 
Sbjct: 284 YHPEVLRYFILSSHYRSPLNYS 305


>gi|297797409|ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata]
 gi|297312424|gb|EFH42848.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata]
          Length = 570

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 68/351 (19%), Positives = 117/351 (33%), Gaps = 55/351 (15%)

Query: 93  LSPSYLRK-----ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L+P++LR+        S     +    + +  G  V + F + +PTG +HVG  R A+  
Sbjct: 19  LAPAFLRRRQSSLFYCSRRSFAVVACSSPVNNGGSVRVRF-APSPTGNLHVGGARTALFN 77

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPG 203
              A   +  G  V R   I D    +            Q L     D  EG       G
Sbjct: 78  YLFAR--SKGGKFVLR---IED--TDLERSTRESEAAVLQDLSWLGLDWDEGPGVSGDFG 130

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL-NIQHDIFISE 262
            Y +     L  +Y+ +LL      +        +  M +I +  LK L  +    + + 
Sbjct: 131 PYRQSERNALYKQYAEKLLESG-HVYRCFCSSEELVKMKEIAK--LKQLPPVYTGKWATA 187

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322
            D            I+    +G  +      PK  + +  D+ R ++ +    +GD    
Sbjct: 188 SDSE----------IEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDF--- 234

Query: 323 PLLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            +++S+G   Y      D A           ++I     +H     R   +  A+     
Sbjct: 235 VVMRSNGQPVYNFCVTVDDAT------MAISHVIR--AEEHLPNTLRQALIYKALEFPMP 286

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---SDSVRFMML 427
           Q        V L       K+SKR G     +    E+G      V ++ L
Sbjct: 287 QFAH-----VSLILAPDRSKLSKRHGATSVGQ--YREMGYLPQGMVNYLAL 330


>gi|223986361|ref|ZP_03636368.1| hypothetical protein HOLDEFILI_03679 [Holdemania filiformis DSM
           12042]
 gi|223961652|gb|EEF66157.1| hypothetical protein HOLDEFILI_03679 [Holdemania filiformis DSM
           12042]
          Length = 567

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 110/348 (31%), Gaps = 69/348 (19%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK  +ELL   +   W+P      +  M+   R D      +A  +   IF +ED     
Sbjct: 74  DKIRTELLQQIDNVDWIPKWGQQRMHNMIAD-RGDWCISRQRAWGVPIPIFYNEDGTPIM 132

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRS--TM 315
           + +    + D     G            + EG   P         + D   + F S  + 
Sbjct: 133 EKAVFEHVADLFREHGSNIWFEKDAKELLPEGYTNPASPNGEFTKETDTMDVWFDSGSSH 192

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAV 374
            G  ++R L                       G+   +Y  GSD   G+      V  AV
Sbjct: 193 TGAMIERGL-----------------------GYPADLYFEGSDQYRGWFNSSLIVGTAV 229

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             +     VL    V    DG  +KMSK   + +    +  + G+D +R           
Sbjct: 230 HGQAPYKQVLSHGFVM---DGKGVKMSKSQWNAVAPGEITKKYGADILRLWAASVDYQAD 286

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDT 493
                 ++ +Q  EN        Y + R+ FR    +I  + DF       + +  + D 
Sbjct: 287 CSMS-EEILKQISEN--------YRKVRNTFRFLLANINNEDDFTKADLVDVSELPKLDQ 337

Query: 494 SELQLIVHLAEYPRVI----ENATIAQEPYKLAFYLYDL-ASVFHGHW 536
             L L+         +    + A        +   L +L  + F  ++
Sbjct: 338 YMLALL-------DEVNAKCQLAYQEYRFSDVTTLLTNLMTNEFSAYY 378


>gi|167626594|ref|YP_001677094.1| methionyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596595|gb|ABZ86593.1| Methionine--tRNA ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 673

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 46/144 (31%), Gaps = 14/144 (9%)

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KM+K  G FI  R  +D +    +R+    R  S + D D    +  +K N       
Sbjct: 328 GKKMAKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNS----DI 383

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                    R A  I+   D  L          E    EL+     A+  R I  A   +
Sbjct: 384 VGKVVNIASRCAGFIYKKFDATLAN--------EVLDKELE--KEFAKSHRAITEAFEKR 433

Query: 517 EPYKLAFYLYDLASVFHGHWSHGR 540
           E       +  LA   +    H +
Sbjct: 434 EFAHAVRLIMTLADKANQFIDHHK 457


>gi|118401495|ref|XP_001033068.1| glutamyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89287414|gb|EAR85405.1| glutamyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 551

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 99/302 (32%), Gaps = 49/302 (16%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR------E 164
           + +  KV + F + +PTG +H+G  R A+     A       ++     +  R      E
Sbjct: 12  VQQKQKVRVRF-APSPTGSLHLGGLRTALFNYLFAKKNKGQFILRIEDTDQKRYVPGSVE 70

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
             I      +    L           NN +D       G Y +    +L  KY  EL+  
Sbjct: 71  NII----KNLQYFQLEWDEGPGAHGKNNLNDYENQGPFGPYFQSQRLQLYQKYIKELIQN 126

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
            +  +        ++ +     +  K L  ++D                 + I     +G
Sbjct: 127 GD-AYYCFCDSNRLEKLKNDQIE--KKLPQKYDGHC---------RHLTDEQIRIKLLKG 174

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
             Y   L  P+ +TT    +  K  +  S +     D+ L+KSDG  TY    LA     
Sbjct: 175 EKYTIRLKVPEGETTFNDIIHGKITINNSQVD----DQILIKSDGFPTYH---LANVIDD 227

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           Y+    ++I         ++           A++ K  +        + L       K+S
Sbjct: 228 YQMKISHVI-----RGHEWITSTPKHLILYDALNIKPPKFAH-----IPLLVKKGGAKLS 277

Query: 402 KR 403
           KR
Sbjct: 278 KR 279


>gi|21232117|ref|NP_638034.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767755|ref|YP_242517.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|30173175|sp|Q8P7C5|SYE_XANCP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|81306266|sp|Q4UWS6|SYE_XANC8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|21113865|gb|AAM41958.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573087|gb|AAY48497.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 467

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 99/296 (33%), Gaps = 63/296 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  RE        Q+   A+
Sbjct: 8   APSPTGYLHIGGARTALYCWLEARHRGGQFVLRI-----EDTDRE-----RSTQVAIDAI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +       L  ++  + +      Y + V ++L  +       +   + L  +++ ++ 
Sbjct: 58  -LEAMEWLGLGYDEGPIYQTQRIARY-QEVAEQLLAQ-GKAYYAYETREELDAMREAAMA 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              K           +++    E    +R DP+ +                    P + T
Sbjct: 115 KQEK----------PRYNGAAREQQLPYRDDPNRV---------------IRFKNPLAGT 149

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ + ++   ++ +    D  + + DG  TY   + A     ++ G   +I   G 
Sbjct: 150 VVFDDLIKGRIEIANSELD---DMVIFRPDGYPTY---NFAVVVDDWDMGITEVIR--GD 201

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
           DH     R   +  A+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 202 DHINNTPRQINIYEALGAPVPKFAHM-----PMILDEQGAKLSKRTGAADVMQYKD 252


>gi|84516029|ref|ZP_01003390.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510471|gb|EAQ06927.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 979

 Score = 41.4 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  ++ AV  +     + L +LV   RD    KMSK  G+ I    ++D+ G+D++
Sbjct: 592 WVARMMMMSQAVMAQDPFHTIYLHQLV---RDAKGEKMSKTKGNVIDPLDMIDQYGADAL 648

Query: 423 RF 424
           RF
Sbjct: 649 RF 650



 Score = 40.3 bits (93), Expect = 1.00,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 59/225 (26%), Gaps = 43/225 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     ++      +G         +     I     N TG +HVGH     + D L   
Sbjct: 9   AAEAEARLYKMWEEAGAFKAGANASRDETFCIMLPPPNVTGHLHVGHAFNHTLMDILTRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +  ++ AG     +                               V K+L
Sbjct: 69  KRMQGFDTLWQPGLDHAGIATQLM-------------------------------VEKDL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--- 270
           A     + +    E +L  V D+       +I    + L    D   S       D    
Sbjct: 98  AATGQPKRVEMGREAFLKKVWDWKGDKG-GVIEQQARRLGDSMDWSRSAFTMSGADSAPA 156

Query: 271 --------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                     +  +  ++  +G +Y G          +    D +
Sbjct: 157 TEPAGNFHDAVIRVFVDMYNKGLIYRGKRLVNWDPHFETAISDLE 201


>gi|261883979|ref|ZP_06008018.1| glutamyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 285

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 23/133 (17%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           +  P+   T   D  +  + F +  + D +   +L+SDG+ TY     A     ++ G  
Sbjct: 154 IKAPRDGETVVHDAVQGDVRFPNKDLDDFI---ILRSDGTPTYMH---AVVVDDHDMGVT 207

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++I   G DH     R   +  A+     Q++      + L       K+SKR G     
Sbjct: 208 HIIR--GDDHLTNAARQTIIYNAMGWDVPQMSH-----IPLIHGADGAKLSKRHG----- 255

Query: 411 RHVVDEVGSDSVR 423
                 +G D+ R
Sbjct: 256 -----ALGVDAYR 263


>gi|256375306|ref|YP_003098966.1| valyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919609|gb|ACU35120.1| valyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 877

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 97/297 (32%), Gaps = 47/297 (15%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344
           V  G    P S      D D     F S +           S   +    ADLA F    
Sbjct: 431 VCVGPDEEPPSGEGWTRDEDVLDTWFSSGL--------WPFSTLGWPARTADLAKFYPTS 482

Query: 345 -YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
               G+D +          +   +  +   +     +       L  L RD    KMSK 
Sbjct: 483 VLSTGYDIL----------FFWVVRMMMFGLYAMDGKQPFDHVFLHGLIRDAHGKKMSKS 532

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463
            G+ I     +D  G+D+ RF +L   N      D    +E +  +  F       +  +
Sbjct: 533 RGNGIDPLDWMDSYGADATRFTLLRGANPGS---DLALAEEWAAGSRNFT-----TKLWN 584

Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHL-AEYPRVIENATIAQEPYKL 521
             R A     +++  L  R+ +     +    L  LI  + A++         A +  ++
Sbjct: 585 ATRFALGNGANVERPLPDRSELTDVDRWVLDLLDGLITEVDAQF--------EAFQFSRI 636

Query: 522 AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +  LY      F   +    E  +++  +   R  +  RL L      +++  L ++
Sbjct: 637 SDALYKFTWDEFCDWY---LELAKVQIAEGGERAES-TRLVL----GHVLDKLLRLL 685


>gi|218263532|ref|ZP_03477613.1| hypothetical protein PRABACTJOHN_03300 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222655|gb|EEC95305.1| hypothetical protein PRABACTJOHN_03300 [Parabacteroides johnsonii
           DSM 18315]
          Length = 875

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 64/249 (25%), Gaps = 44/249 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K     + +G    +    +   + I     N TG +H+GH     + D L       G 
Sbjct: 15  KWYQYWLDNGFFKSKPDGREPYTIVI--PPPNVTGVLHMGHMLNNTIQDILIRRARMQGK 72

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                   + A   I T A  V    QQ +   D                  E  +++  
Sbjct: 73  NACWVPGTDHA--SIATEAKVVNRLAQQGIKKTD-------LTREDFLKHAWEWKEEHG- 122

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                                   II   L+ L    D   +           +  +  +
Sbjct: 123 -----------------------GIILKQLRKLGASCDWDRTAFTMDELRSESVIKVFVD 159

Query: 280 LARQGYVYEGI---------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           L  +G +Y G+         L     +     +   K    R  + GD   R  + +   
Sbjct: 160 LYEKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDPEGRYAVVATTR 219

Query: 331 YTYFAADLA 339
                 D A
Sbjct: 220 PETIMGDTA 228


>gi|167646748|ref|YP_001684411.1| glutamyl-tRNA synthetase [Caulobacter sp. K31]
 gi|238687830|sp|B0SZ02|SYE_CAUSK RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|167349178|gb|ABZ71913.1| glutamyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 474

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 13/112 (11%)

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P   TT   D+ +  + F +  +    D  LL++DG+ TY   +LA     ++ G  ++I
Sbjct: 152 PLDGTTLVDDLVKGPVTFDNAELD---DLVLLRADGAPTY---NLAVVVDDHDMGVTHVI 205

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              G DH     R   +  A+              + L       K+SKR G
Sbjct: 206 R--GDDHLNNAARQTLIYQAMGWTLPAFGH-----IPLIHGPDGAKLSKRHG 250


>gi|17989388|ref|NP_542021.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256043121|ref|ZP_05446063.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564343|ref|ZP_05834828.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265989553|ref|ZP_06102110.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|81850045|sp|Q8YB57|SYI_BRUME RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|17985262|gb|AAL54285.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260151986|gb|EEW87079.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263000222|gb|EEZ12912.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 972

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWI-------RVQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 460

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 102/315 (32%), Gaps = 45/315 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D L   +   G +V    Y+      I  +   +  R  +   + ++  
Sbjct: 37  HMGHARTYLSFDVLVRYLRHLGLDVK---YV----RNITDIDDKIIARANENGESFEALT 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                     + +     D  +  LL    E  +    D  ++ + +++           
Sbjct: 90  A---------RTIAMMHEDFAAINLLEPDVEPTVSGHMDEIIEIIQRLMDKGYAYQAKSG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+      +        +D +D L        G      +      D     +L+++T  
Sbjct: 141 DVLFDVSKYEDYGKLSKQD-LDQLKA------GARVEVAAGKDDPLDF----VLWKTTKP 189

Query: 317 GDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAV 370
           G+     P    +G   +     A         FD  I+  GSD     H   V +    
Sbjct: 190 GEPAWQSPW--GEGRPGWHIECSAMNHKHLGAHFD--IHGGGSDLTFPHHENEVAQSCCA 245

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
                     +NV +   +    D    KMSK  G+F TLR V+ E  S+++RF ++   
Sbjct: 246 -----YDTPYVNVWMHAGMVQVND---EKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAH 297

Query: 431 NSELLDFDFCKVKEQ 445
               L +    + + 
Sbjct: 298 YRSQLSYSQDNITQA 312


>gi|254695332|ref|ZP_05157160.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261215703|ref|ZP_05929984.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260917310|gb|EEX84171.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 972

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWI-------RVQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|225686056|ref|YP_002734028.1| isoleucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256262823|ref|ZP_05465355.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642161|gb|ACO02074.1| isoleucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263092644|gb|EEZ16865.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410380|gb|ADZ67444.1| isoleucyl-tRNA synthetase [Brucella melitensis M28]
 gi|326553673|gb|ADZ88312.1| isoleucyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 972

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWI-------RVQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|71394074|gb|AAZ32113.1| isoleucyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 945

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           ++K   +++    V    D   +KMSK  G+ +T    +++   D +R+  L    S+ +
Sbjct: 559 DRKPFDHIMYHGFV---LDTHGVKMSKSKGNAVTTNEAIEKYSRDELRYYYLTVDYSQDM 615

Query: 436 DFDFCKVKEQSK 447
            FD+  ++E  K
Sbjct: 616 TFDWNTLRENRK 627


>gi|48428670|sp|Q970Z6|SYL2_SULTO RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
          Length = 944

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 56/199 (28%), Gaps = 33/199 (16%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +           +  N      K         P  P H+GH R  V  D  A  M   
Sbjct: 4   IAEKWQKEWEKAKIFEANPDRTRNKFFTTVAFPYPNSPFHLGHGRTYVTCDIYARYMRMK 63

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKEL 213
           GY V     ++    G  I  +A  V    ++   ++ N  ++P+              +
Sbjct: 64  GYNVLFPMGFHY--TGTPIIAMADDVAKGDKELIDIFKNIYEIPDN-------------V 108

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             K +  L              +        I+  +K + +  D             S I
Sbjct: 109 ISKLADPL--------------FMANYFRDEIKKAMKEIGLSIDWRREFTTIDPEFSSFI 154

Query: 274 RDIIDNLARQGYVYEGILP 292
               + L  +GY+     P
Sbjct: 155 VWQFNKLQEKGYIVRDTHP 173


>gi|126443976|ref|YP_001062864.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126223467|gb|ABN86972.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 967

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERGGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|284048088|ref|YP_003398427.1| glutamyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952309|gb|ADB47112.1| glutamyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 490

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 93/281 (33%), Gaps = 36/281 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP H+G  R A+    LA     +G  + R   I D     +          + A
Sbjct: 10  APSPTGPFHIGGARSALFNWLLAR--KENGVMLLR---IEDTDR--DRSKPEWEANIKAA 62

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     D  E    G   G Y +    ++  KY+ +LL   +  +               
Sbjct: 63  LKWLGIDWDEGVDVGGPNGPYRQMERLDIYKKYTDKLLAEGKAYYCY------CTPEELE 116

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
              +      +   ++ +    R      R   +   R+  +       P+++     D 
Sbjct: 117 AEREALTAQGKMPRYMGKC---RNLTPEQRAAYEAEGRKPTIR---FRVPENEDIVVHDE 170

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
            R  + F S  +GD     ++KSDG  TY   + A        G + +I     +H    
Sbjct: 171 VRGDVHFDSNGIGDF---VIVKSDGIPTY---NYAVVIDDALMGVNCVIR--AEEHLSNT 222

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R   +  A+  +K          + L       KMSKR G
Sbjct: 223 PRQLLLYDALGFEKPTFGH-----ISLILGPDHKKMSKRHG 258


>gi|256111897|ref|ZP_05452853.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265993345|ref|ZP_06105902.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262764215|gb|EEZ10247.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 972

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWI-------RVQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|222624062|gb|EEE58194.1| hypothetical protein OsJ_09140 [Oryza sativa Japonica Group]
          Length = 977

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 10/161 (6%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV--SANPTGPMHVGHCRCAVVGDT 149
           +L+    ++   + V   I +GR+           +V    N TG +H+GH     + D 
Sbjct: 111 FLASQMAKQYSPAAVEKSIFWGRSCGSYFEVCTRYYVLPPPNVTGALHIGHALTVAIEDA 170

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +      SGY       ++ AG     +      R ++       D+         LK  
Sbjct: 171 IIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMREKKLTR---HDIGREELVSEVLK-- 225

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                D+Y   +LN        +     V  +       LK
Sbjct: 226 ---WKDEYGGTILNQLRRLGASLDWSREVDYLDIKEETMLK 263


>gi|254460912|ref|ZP_05074328.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677501|gb|EDZ41988.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 853

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +          K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQEAWNTANTFKAERDESKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKMSTG 69

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPGVYLKHVGKELA 214
           + V      +  G      A+++    +   Y+N +D+ E          + +       
Sbjct: 70  HNVLHPMGWDAFGMPAENAAMAIGGHPKDWTYSNIADMREQMKPLGLSIDWSREFATCDV 129

Query: 215 DKYSSE---LLNFPEE 227
           D Y  +    L+F +E
Sbjct: 130 DYYGQQQALFLDFLDE 145


>gi|221068254|ref|ZP_03544359.1| glutamyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713277|gb|EED68645.1| glutamyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 468

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 84/279 (30%), Gaps = 41/279 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A     +G +      I D       L  S        
Sbjct: 10  APSPTGFIHLGNIRSALYPWAFAR---ANGGDFVLR--IED-----TDLERSTQASVDVI 59

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   +  L   +  G + +    +  D+Y   L    E+ ++        +      +  
Sbjct: 60  LEGME-WLQLDHDEGPFYQ---MQRMDRYKQVLATLQEKGYVYPCYMSMQELDALREKQM 115

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ--KCDMDR 306
                 ++D         R +   +   I          EG+ P  + KT Q      D 
Sbjct: 116 AAKEKPRYDGTW------RPEEGKVLPAI---------PEGVKPVLRFKTPQTGVVGWDD 160

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
           K          +  D  + + DG+ TY            +    ++I   G DH     R
Sbjct: 161 KCKGRIEFQNSELDDLVIARPDGTPTYNFCVC---VDDMDMNITHVIR--GDDHVNNTPR 215

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              +  A+              +    +    KMSKR G
Sbjct: 216 QIHIFEALGATVPTFAH-----LPTVLNEQGEKMSKRNG 249


>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|187629787|sp|A8MLB7|SYC_ALKOO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 464

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 97/324 (29%), Gaps = 40/324 (12%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+G+ R  +V D L   + + GY+VT      D   +I         R   
Sbjct: 27  CGPTVYNYFHIGNARTFMVFDALRRYLIYRGYDVTFVQNFTDVDDKI--------IRRAN 78

Query: 188 ALYNNDSDLPEGYYPGVYLKH--VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                  ++ E +    +     +G E AD +     N  E           + A +  +
Sbjct: 79  EEGVAPEEISERFIKEYFYDAGTLGIEKADIHPKVTENMAE-----------IIAFVAKL 127

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +   A     D++     +              L++Q           +    +K  +D
Sbjct: 128 VEKGHAYESNGDVYFDVSKYEEYG---------KLSKQSLEDLQAGARIEINEYKKNPLD 178

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              L   +       + P    +G   +     A  K    R     I + G        
Sbjct: 179 F-ALWKSAKAGEPSWESPW--GNGRPGWHIECSAMAK----RYLGETIDIHGGGGDLVFP 231

Query: 366 RLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             E  +A + +    +       +  L  D    KMSK   +F T R + +E   +++RF
Sbjct: 232 HHENEIAQSEACSGKKFANYWLHVGYLNVDNK--KMSKSLNNFFTPREISEEFDLENLRF 289

Query: 425 MMLWRKNSELLDFDFCKVKEQSKE 448
            ML       ++F    ++     
Sbjct: 290 FMLSAHYRNPINFSRDLLEAAKNG 313


>gi|53804443|ref|YP_113698.1| glutamyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|67461930|sp|Q609J9|SYE2_METCA RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|53758204|gb|AAU92495.1| glutamyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 468

 Score = 41.4 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 46/346 (13%), Positives = 106/346 (30%), Gaps = 81/346 (23%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     ++ R          + ++   + 
Sbjct: 8   APSPTGHLHIGGARTALFSWLYARKHGGTFILRIEDTDLERST--------VESVNAILE 59

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQA 240
                 L  ++    + +              D+Y   +    EE   +        +  
Sbjct: 60  GMTWLGLEYDEGPFYQTHR------------FDRYREVMEQLLEEGHAYRCYCTKEELDE 107

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           +     +  +    ++D        HR +P P           G +       P      
Sbjct: 108 LRAGQME--RKEKPRYDG----RCRHRSEPRP-----------GVLPVIRFRNPTEGEVA 150

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ R ++ F+++ +    D  + +SDG+ TY    +       +    ++I   G DH
Sbjct: 151 WDDLVRGRIAFQNSELD---DLIIARSDGTPTYNFTVV---VDDLDMKISHVIR--GDDH 202

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------R 411
                R   +  A+  +  +   +    + L  DG   ++SKR G    +          
Sbjct: 203 VNNTPRQINILKALGVEPPRYGHV---PMILGADGA--RLSKRHGAVSVMQYRDEGYLPE 257

Query: 412 HVVDEVGS--------------DSVRFMMLWRKNSELLDFDFCKVK 443
            +++ +                + + +      N     F+  K+ 
Sbjct: 258 ALLNYLVRLGWSHGDQEIFSVDEMIEYFDANAINHSAATFNPDKLL 303


>gi|328541707|ref|YP_004301816.1| Leucyl-tRNA synthetase protein [polymorphum gilvum SL003B-26A1]
 gi|326411459|gb|ADZ68522.1| Leucyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 870

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                 +   G  +  +      K  +  +   P+G +H+GH R   +GD +A      G
Sbjct: 12  EARWQKVWEDGDVFRTSNDDPRDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARG 71

Query: 159 YEV 161
           + V
Sbjct: 72  FNV 74


>gi|325294665|ref|YP_004281179.1| methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065113|gb|ADY73120.1| Methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 525

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 75/421 (17%), Positives = 133/421 (31%), Gaps = 74/421 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI---------------NTLALSV 181
           H+GH       D +A    F G +V      ++ G +I               +TL    
Sbjct: 18  HLGHAYTTTAADIVARFNRFLGRDVFFLTGTDEHGQKIQQAAEKRGMTPKEFVDTLVPKF 77

Query: 182 FWRYQQALYNNDSDL----PEGYYPGVYLKHVGKELADKYSSEL--------------LN 223
              +++   + D  +    PE      Y+     E  D Y  E                 
Sbjct: 78  KELWEKLNISYDHFIRTTDPEHIKAVQYIFKKCYENGDIYLGEYEGWYCIPCETYHTEKE 137

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED------DFHRGDP-SPIRDI 276
             E K+ P+ K   V+   +     L     +   F  E+      +F R +  + ++  
Sbjct: 138 LLEGKYCPMCKREVVRVKEESYFFRLSKYQDRLLEFYEENPDFIAPEFRRNEVINFVKQG 197

Query: 277 IDNLA-RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           + +L+  +     GI  P   K       D       +    D++D+          Y+ 
Sbjct: 198 LKDLSISRTSFTWGIPVPINEKHVIYVWFDALTNYLTAVGYPDNMDKV-------NHYWP 250

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           ADL                ++G D    + R   V        A + +        +   
Sbjct: 251 ADLH---------------LVGKD----ILRFHTVYWPAFLMSAGLEIPKRVFAHGWWTV 291

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL--DFDFCKVKEQSKENPVFY 453
              KMSK  G+      ++++ G D VRF  L+R+ S  L  DF + K+  +        
Sbjct: 292 NGEKMSKSKGNVANPFEIIEKFGVDQVRFF-LFREVSFGLDGDFTYEKLVGRINGELAND 350

Query: 454 VQYAYARCRSIF---RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
           +   + R  S+    R++    P    D     +  +         +LI   AE  R +E
Sbjct: 351 LGNLFNRTLSMLKKYRKSIVPEPKGAEDELDVELKNKAIATAARLKELIPK-AELTRALE 409

Query: 511 N 511
            
Sbjct: 410 E 410


>gi|300024794|ref|YP_003757405.1| leucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526615|gb|ADJ25084.1| leucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 3/68 (4%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
                 + +     + I        +     +E     P+G +H+GH R   +GD  A  
Sbjct: 10  DRERYWQHIWD--KNQIFRASEDHKQAKCYVLEMF-PYPSGRIHMGHVRNYAMGDVFARF 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KRAKGFNV 74


>gi|257873265|ref|ZP_05652918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257807429|gb|EEV36251.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  YF   +          +D +       IY+ G++H+     Y +        +   
Sbjct: 495 GSSWYFLRFIDPHNKSVLADYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVV 554

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    V+++ G+D++R
Sbjct: 555 PTKEPFEKLFNQGMILGEN--NEKMSKSRGNVVNPDDVINQYGADTLR 600


>gi|284040364|ref|YP_003390294.1| valyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283819657|gb|ADB41495.1| valyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 895

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 55/216 (25%), Gaps = 33/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +      +    +      +     I     N TG +H+GH     + D L 
Sbjct: 5   TYAPQEIEEKWYQYWLDNQFFKSTPDPEKEPYTIVIPPPNVTGVLHMGHMLNNTIQDVLV 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G         + A   I T A  V    ++ +   D                  
Sbjct: 65  RKARMEGKNACWVPGTDHA--SIATEAKVVAMLKERGISKKD-------LTREEFLEYAW 115

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   KY   +L+                         L+ L    D   +          
Sbjct: 116 EWTHKYGGIILSQ------------------------LRKLGASCDWDRTRFTMEPALHD 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            + D+  +L  +G +Y G+         +    D +
Sbjct: 152 SVIDVFVDLYEKGQIYRGVRMVNWDPQGRTAVSDEE 187


>gi|198274356|ref|ZP_03206888.1| hypothetical protein BACPLE_00501 [Bacteroides plebeius DSM 17135]
 gi|198272722|gb|EDY96991.1| hypothetical protein BACPLE_00501 [Bacteroides plebeius DSM 17135]
          Length = 505

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 102/296 (34%), Gaps = 36/296 (12%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ---- 173
               KV + F + +PTG +H+G  R A+     A       +     + I D  +     
Sbjct: 1   MSERKVRVRF-APSPTGALHIGGVRTALYNYLFARQ-----HGGELIFRIEDTDSHRFVP 54

Query: 174 --INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
                +  S  W   Q  ++        Y  G Y +   +++  KY   LL+  +  ++ 
Sbjct: 55  GAEEYIIESFKWLGIQ--FDEGVSFGGNY--GPYRQSERRDIYKKYVQVLLDNGK-AYIA 109

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
                 ++A  + I               S     R   +  ++ +D L  +G  Y    
Sbjct: 110 FDTPEELEAKRQEIP--------NFQYDASTRTSMRNSLTLPKEEVDKLIAEGKQYVVRF 161

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFD 350
               ++     D+ R +++  S+++    D+ L KS D   TY    LA     +     
Sbjct: 162 KIEPNEDVHVHDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVS 215

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           ++I   G +          +  A   +          L+ L  DG   K+SKR GD
Sbjct: 216 HVIR--GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLL-LKPDGNG-KLSKRDGD 267


>gi|157376611|ref|YP_001475211.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083149|sp|A8FZ10|SYL_SHESH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157318985|gb|ABV38083.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 863

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   KPSEIEAKVQQHWQDKKTFEVTEDENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|125542110|gb|EAY88249.1| hypothetical protein OsI_09701 [Oryza sativa Indica Group]
          Length = 741

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 12/159 (7%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV--SANPTGPMHVGHCRCAVVGDT 149
           +L+    ++   + V   I +GR+           +V    N TG +H+GH     + D 
Sbjct: 67  FLASQMAKQYSPAAVEKSIFWGRSCGSYFEVCTRYYVLPPPNVTGALHIGHALTVAIEDA 126

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +      SGY       ++ AG     +      R ++       D+    +    LK  
Sbjct: 127 IIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMREKKLTR---HDIGREEFVSEVLK-- 181

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                D+Y   +LN        +     V  +   I+++
Sbjct: 182 ---WKDEYGGTILNQLRRLGASLDWSREVDYL--DIKEE 215


>gi|108708017|gb|ABF95812.1| Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group]
          Length = 1012

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 32/101 (31%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + K   +   S   +  +         I     N TG +H+GH     + D +    
Sbjct: 103 PSTVEKSWYAWWESSGYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWR 162

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
             SGY       ++ AG     +      R +    ++   
Sbjct: 163 RMSGYNALWVPGVDHAGIATQVVVEKKLMRERNLTRHDIGP 203


>gi|327438250|dbj|BAK14615.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 467

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 99/324 (30%), Gaps = 40/324 (12%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V DT+   + ++GYEV       D   +I   A  +      
Sbjct: 29  CGPTVYNYIHIGNSRPVIVYDTVRRYLQYAGYEVKFVSNFTDVDDKIIKAANEL------ 82

Query: 188 ALYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                ++ +    +   Y + +   G + AD +     +  +           +   +K+
Sbjct: 83  ---GEETSVLTDRFIAAYFEDITALGCQKADAHPRVTEHMDD-----------IIEFIKV 128

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           + D   A   Q D++     F+ G        ID+L          +        +K D 
Sbjct: 129 LIDKGYAYESQGDVYYRTRKFN-GYGKLSHQSIDDLK---------VGARIEAGEKKEDP 178

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L   +         P  +    +    + +A           + I +         
Sbjct: 179 LDFALWKAAKAGEIKWASPWGEGRPGWHIECSVMA------REHLGDTIDIHAGGQDLTF 232

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
              E   A  SE           +   Y +    KMSK  G+FI +  +  ++    +RF
Sbjct: 233 PHHENEIAQ-SEAHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIRQQIDPQVLRF 291

Query: 425 MMLWRKNSELLDFDFCKVKEQSKE 448
            ML       ++F    V+     
Sbjct: 292 FMLSVHYRNPINFAQDLVEAAKNG 315


>gi|319780907|ref|YP_004140383.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166795|gb|ADV10333.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +     +    N   +     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  KWQKAWDAKKLFEAHNDDPRPKYYVLEMF-PYPSGRIHIGHTRNYTMGDVVARYKRAKGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|152967451|ref|YP_001363235.1| valyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361968|gb|ABS04971.1| tRNA synthetase valyl/leucyl anticodon-binding [Kineococcus
           radiotolerans SRS30216]
          Length = 877

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 51/156 (32%), Gaps = 29/156 (18%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   +++E GSD+VR+     +      FD  ++K          
Sbjct: 596 DPDRKKMSKSKGNVVTPLALLEEFGSDAVRYWAASSRLGTDATFDTGQMKIGR------- 648

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 R       A      L  +          +E   + +     LA+   V+  AT
Sbjct: 649 ------RLAMKLLNASKFVLGLGVERGTAADPAAVTEAVDASV-----LADLAVVVRQAT 697

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRL 545
            A E      Y      D+   F   W+   +   L
Sbjct: 698 EAFE-----RYDHASALDVTEKF--FWNFCDDWVEL 726


>gi|56118905|ref|NP_001008042.1| probable glutamyl-tRNA synthetase, mitochondrial precursor [Xenopus
           (Silurana) tropicalis]
 gi|82234482|sp|Q66JG3|SYEM_XENTR RecName: Full=Probable glutamyl-tRNA synthetase, mitochondrial;
           AltName: Full=Glutamate--tRNA ligase; Short=GluRS;
           Flags: Precursor
 gi|51703387|gb|AAH80925.1| glutamyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus
           (Silurana) tropicalis]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 99/336 (29%), Gaps = 70/336 (20%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           ++   +L + L      G     +    G +V + F + +PTG +H+G  R A+     A
Sbjct: 5   FIRGKWLSRTLELATGLGRRTCSSRE-SGREVRVRF-APSPTGFLHLGGLRTALYNYLFA 62

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G          D    +   A S+    + A    D     G   G Y +    
Sbjct: 63  ---KKHGGAFILRLEDTDRSRLVPGAAESIEDMLEWAGIPPDESPRHGGPCGPYEQSKRL 119

Query: 212 ELADKYSSELLN-------FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
           +L    +  LL+       F   + L ++K    +AM                    E+ 
Sbjct: 120 DLYHVAAQALLDSGAAYRCFCTPQRLELLKR---EAMRNRQTPRYDNRCRHLTPKQVEEK 176

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
             R  P  IR          ++ EG  P            D      +  +   + D  +
Sbjct: 177 LSRNSPFVIR---------FFLQEGAQP----------FQDLVYGWTQHDVASVEGDPVI 217

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG---YVKRLEAVA---------- 371
           LK DG  TY  A                  V+  DH     +V R               
Sbjct: 218 LKGDGFPTYHLA-----------------NVVD-DHHMCVSHVLRGAEWLISTAKHLLLY 259

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            A+  +  Q        + L  +    K+SKR GD 
Sbjct: 260 QALGWQPPQFAH-----LPLLLNKDGSKLSKRQGDI 290


>gi|331695815|ref|YP_004332054.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950504|gb|AEA24201.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 58/212 (27%), Gaps = 32/212 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +    V    +  +         I     N TG +H+GH     + D L   
Sbjct: 17  NPGEVEGGMYQRWVERGYFEADPSSDRPPYCIAIPPPNVTGSLHLGHAMDHTLIDILTRR 76

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+      ++ AG        SV  R                            L
Sbjct: 77  RRMQGYDTLWLPGMDHAG----IATQSVVER---------------------------RL 105

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
           AD           E+++  V ++  ++   I+   +K L    D          G    +
Sbjct: 106 ADAGEPTRRELGREEFVRRVWEWKAESGGAILGQ-MKRLGDGVDWSRERFTLDEGLSRAV 164

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +   +   G +Y        S   Q    D
Sbjct: 165 QTVFKRMFDDGLIYRAERLVNWSPALQSAISD 196



 Score = 38.4 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                L  L RD    KMSK  G+ I    ++D  G+D++RF +    N 
Sbjct: 512 FRHVYLHGLIRDEHGRKMSKSKGNVIDPLELIDAYGADALRFTIARGSNP 561


>gi|299133850|ref|ZP_07027044.1| valyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591686|gb|EFI51887.1| valyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 956

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 87/277 (31%), Gaps = 48/277 (17%)

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYL------------KHVGKELADKYSSELL 222
           + +A      Y + +  N   +P G   GV +            K +         S   
Sbjct: 345 DIVARLEQQGYLEKIEPNTHMVPHGDRSGVVIEPFLTDQWYVDAKTLAAPAIAAVRSGAT 404

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED---DFHRGDPSPIRDIIDN 279
            F  + W     ++        I   L     Q   +   D        +   +   +  
Sbjct: 405 AFVPKNWEKTYFEWMENIQPWCISRQLW-WGHQIPAWYGPDGKVFVAETEEEAVGKALGY 463

Query: 280 LARQGYV-----YEGILPPPKSKTTQKCDMDRKQLLFRS-----TMVGDDVDRPLLKSDG 329
              QG +     ++  + P K +     D D     F S     + +G   D    + D 
Sbjct: 464 YTEQGVITDEQAHDMAVDPAKREEFITRDEDVLDTWFSSALWPFSTLGWPDD----EKDV 519

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389
              Y  + L         GFD +I+         V R+  +            V +  LV
Sbjct: 520 RRYYPTSVLVT-------GFD-IIFFW-------VARMMMMGLHFMNDVPFPTVYIHALV 564

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
              RD    KMSK  G+ I   H++D+ G+D++RF +
Sbjct: 565 ---RDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTL 598


>gi|257877008|ref|ZP_05656661.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811174|gb|EEV39994.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  YF   +          +D +       IY+ G++H+     Y +        +   
Sbjct: 495 GSSWYFLRFIDPHNKSVLADYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVV 554

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    V+++ G+D++R
Sbjct: 555 PTKEPFEKLFNQGMILGEN--NEKMSKSRGNVVNPDDVINQYGADTLR 600


>gi|224476295|ref|YP_002633901.1| isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782437|sp|B9DPP7|SYI_STACT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222420902|emb|CAL27716.1| putative isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 915

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 102/315 (32%), Gaps = 57/315 (18%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRG 268
           K   ++L+  E+    +  D+    +  +IRD  +          +   +F +E+     
Sbjct: 418 KVRQDILDAIEDTNFKV--DWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYTENGDIIM 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
           D   I  + +   + G            + EG   P         + D   + F S    
Sbjct: 476 DKEVIYHVANLFEKYGSNVWFDRDAKDLLPEGFTHPGSPNGEFTKEEDIMDVWFDSGS-- 533

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
               R +L++                + E  F   +Y+ GSD   G+       A A   
Sbjct: 534 --SHRGVLET----------------RPELSFPADLYLEGSDQYRGWFNSSITTAVATRG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     +L    V    DG   KMSK  G+ I    +V + G+D  R  +        + 
Sbjct: 576 QSPYKFLLSHGFVM---DGEGKKMSKSLGNVIVPDQIVKQKGADIARLWVSSVDYLSDVR 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++ +Q+ +         Y + R+  R       D +    P      ES+    + 
Sbjct: 633 IS-DEILKQTAD--------VYRKIRNTLRFMLGNVNDFN----PETDAVPESDLLEVDR 679

Query: 497 QLIVHLAEYPRVIEN 511
            L+  L E+   I N
Sbjct: 680 YLLNRLREFTESIIN 694


>gi|126459305|ref|YP_001055583.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166231634|sp|A3MU00|SYL_PYRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126249026|gb|ABO08117.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 946

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 59/204 (28%), Gaps = 32/204 (15%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++    + +           +  +      K  I      P G +H+GH R  +V D +
Sbjct: 7   FFIE---VAEKWQRRWAEAKVFEPSPQPGRPKFFITAAYPYPNGTIHIGHGRTYLVADVM 63

Query: 151 ASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           A      GY V     ++    G  I T+A  +    +  +           Y  +Y   
Sbjct: 64  ARFRRHLGYNVLFPMAFHY--TGTPILTIAEVIAAGDKAVIEE---------YKEIY--G 110

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V  +   K    L              Y  Q   +  ++ +    +  D           
Sbjct: 111 VSDDDIKKMGDPL--------------YLAQYFHRRSKEAMIKFGLGIDWSREFTTIDPE 156

Query: 269 DPSPIRDIIDNLARQGYVYEGILP 292
               I+   + L ++G +  G  P
Sbjct: 157 YQRFIQWQFEKLRKRGLIVRGRHP 180


>gi|54020648|ref|YP_116175.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987821|gb|AAV28022.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 755

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG----YVKRLEAVAAAVSE--K 377
           +LK    Y    + +AY K K     D  +Y+ G +H+     Y +    V         
Sbjct: 451 ILKEKDKYLPLDSKIAYDKFKKWLPVD--LYIGGQEHAVGHLIYSRFWHKVLFDAGIVPN 508

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                 ++ + + L  DG   KMSK  G+ I    ++D+ G+D++R  ++
Sbjct: 509 SEPFQKIIHQGMLLGSDGQ--KMSKSKGNTINPTEMIDKFGADTIRIFLM 556


>gi|304315496|ref|YP_003850643.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|9297121|sp|P26499|SYI_METTM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68525|pir||SYEXI isoleucine-tRNA ligase (EC 6.1.1.5) [validated] - Methanobacterium
           thermoautotrophicum (strain Marburg)
 gi|149728|gb|AAA72950.1| transfer RNA-Ile synthetase [Methanothermobacter
           thermautotrophicus]
 gi|302588955|gb|ADL59330.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 1045

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 17/189 (8%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML-WRKNSELLDFDFCKV 442
           +L     L  +G   KMSK  G+ +    V+++ G+D +RF +L   K  E L F + ++
Sbjct: 578 VLMHGFTLDEEGR--KMSKSLGNVVEPEDVIEKYGADVLRFYLLWANKPWEDLKFVWDEL 635

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           K  +K   + +  Y +A          D F   D +L   +   ++    +    + +  
Sbjct: 636 KNVNKMFNILWNVYVFATTYMSL----DRFQPGDHELEDLHFRDEDRWIISRVNSVALK- 690

Query: 503 AEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561
                 +  A      ++    ++D +       +   R      +++ ++         
Sbjct: 691 ------VTEALDNLHFHRATREIHDFIVEDLSRWY--IRLIRSRTWIERDDPDKLAAYHS 742

Query: 562 LVHAVASII 570
           L  A+ ++I
Sbjct: 743 LYTALKTLI 751


>gi|86140543|ref|ZP_01059102.1| putative valyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832485|gb|EAQ50934.1| putative valyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 877

 Score = 41.4 bits (96), Expect = 0.41,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 61/244 (25%), Gaps = 35/244 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           S    +K     +     Y  +         I     N TG +H+GH     + D L   
Sbjct: 9   SKEVEQKWYDYWMEHN--YFHSEPNDKEPYTIVIPPPNVTGILHMGHMLNNTIQDVLIRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+               +  +++   +    L     +         +LKH   E 
Sbjct: 67  ARLKGFNAC-------WVPGTDHASIATEAKVVAKLKAEGIN-KSDLTRDEFLKH-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DKY                           I + LK L    D             + +
Sbjct: 118 TDKYG------------------------GTILEQLKKLGASCDWERLRFTMDDTMSASV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333
                +L  +G +Y G          Q    D + +          +   L+ SD + T 
Sbjct: 154 IQSFVDLYNKGLIYRGHHMVNWDPEAQTTLSDEEVIHEERQGFLYYLSYKLVGSDETLTI 213

Query: 334 FAAD 337
               
Sbjct: 214 ATTR 217



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 81/240 (33%), Gaps = 29/240 (12%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGD 269
           +LA+     +L   E    P   + + +  M+ IRD     NI   ++  +    ++ G+
Sbjct: 364 DLAEPAIKAVLESDEVNLFPKKFENTYRHWMENIRD----WNISRQLWWGQQIPAYYYGN 419

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL--LFRSTMVGDDVDRPLLKS 327
                 ++     +            +        D   L   F S +       P+   
Sbjct: 420 GQE-DFVVAKSREEALEAAKAKTGNTALIDADLRQDEDALDTWFSSWLW------PMSVF 472

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQINVLL 385
           DG      AD  Y+    +        V G D   +      + A      +K   NV L
Sbjct: 473 DGVANPDNADFKYYYPTNDL-------VTGPD-ILFFWVARMIMAGYEYTGEKPFTNVYL 524

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFCKVKE 444
             LV   RD    KMSK  G+      ++D+ G+D VR  ++L       L FD    ++
Sbjct: 525 TGLV---RDAERRKMSKSLGNSPDAMKLIDDYGADGVRVGLLLSASAGNDLLFDEDLCQQ 581


>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 78/251 (31%), Gaps = 43/251 (17%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D+      +  + EG   P     T   +MD   + F S               GS    
Sbjct: 493 DVWFEREAKDLLPEGFTHPSSPNGTFTKEMDIMDVWFDS---------------GSSH-- 535

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
                    + E  F   +Y+ GSD   G+       + AV ++     VL    V    
Sbjct: 536 ---AGVLSVRPELTFPADLYLEGSDQYRGWFNSSLTTSVAVHKQAPYKAVLSQGFVM--- 589

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ I+    +   G+D +R  +        +      + + S+      
Sbjct: 590 DGEGKKMSKSLGNVISPAKEMQTKGADIIRLWVSSVDYESDVRISTEILNQISE------ 643

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI---E 510
              AY + R+  R    +    DF+     V  ++             +  +  V+   E
Sbjct: 644 ---AYRKIRNTMR--FMLANTTDFEPSKHAVAFKDLRSVDQ-----YMMIRFNDVVKTIE 693

Query: 511 NATIAQEPYKL 521
            A    E   +
Sbjct: 694 EAYENYEFSTI 704


>gi|225849056|ref|YP_002729220.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643562|gb|ACN98612.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 626

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 112/351 (31%), Gaps = 32/351 (9%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------Y 190
           H+GH    +  D +A      G +       ++ G +I   A       ++        +
Sbjct: 19  HLGHAYTTIACDVMARYYRQKGVDTFFLTGTDEHGQKIQKAAEEKGIHPKELADKTHLSF 78

Query: 191 NNDSDLPEGYYPG-------VYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSVQAM 241
            N  +     Y          ++K V       Y      L   E  +    +++  +  
Sbjct: 79  KNLWEKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLAEYESYYCVGCEEFKTETE 138

Query: 242 MKIIRDDLKA-LNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-----QGYVYEGILPPPK 295
           +K    D K  ++++    + E+ +          +++   +     Q       +    
Sbjct: 139 IKDY--DYKCPIHLKPCEKVKEESYFFRLSKYTEKLLEFYEKNPDFIQPDFRRNEVVSFV 196

Query: 296 SKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  +   + RK+  + +   +  D+     +  D    Y  A    +     + +   +
Sbjct: 197 KQGLKDLSVSRKKDRVWWGIPVPFDESHTIYVWFDALTNYLTA--VGYPDNLNKFWPADV 254

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           +V+G D    + R  AV        A I +        +      KMSK  G+ +     
Sbjct: 255 HVVGKD----ILRFHAVYWPAFLMSAGIEIPKKVFAHGWWTVEGHKMSKSLGNVVDPFKA 310

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
            DE G D +R+ +L R+    LD DF      ++ N            RS+
Sbjct: 311 ADEYGVDQLRYFLL-REVPFGLDGDFSNQAVVNRINSDLANDLGNLVSRSL 360


>gi|218459063|ref|ZP_03499154.1| valyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 262

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 29/175 (16%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVR-LYRDGMPIKMSKRA 404
            GFD +I+   +        +      + +     +       V  L RD    KMSK  
Sbjct: 43  TGFD-IIFFWVAR------MMMMGLHFMKDDDGNPVEPFSTVYVHALVRDKNGQKMSKSK 95

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE---NPVFYVQYAYARC 461
           G+ I    +VDE G+D++R             F    +  Q ++   +P     Y   R 
Sbjct: 96  GNVIDPLELVDEYGADALR-------------FTLAIMAAQGRDVKLDPARIAGY---RN 139

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
                     F +++      + +P+ +E   +   ++  LA   R +  A  A 
Sbjct: 140 FGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTELARTERDVTEALEAF 193


>gi|194748849|ref|XP_001956854.1| GF10139 [Drosophila ananassae]
 gi|190624136|gb|EDV39660.1| GF10139 [Drosophila ananassae]
          Length = 996

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 50/190 (26%), Gaps = 36/190 (18%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    + +        K     +     N TG +H+GH   A V D +A   +  G
Sbjct: 53  AYWEREQRHNNLPRTGGERCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQQSQLG 112

Query: 159 YEVTREYYINDA--GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           YEV       D   G     +A  V                           V + +A  
Sbjct: 113 YEV-------DWVPGTDHAGIATQVV--------------------------VERTVAAA 139

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                       +L  V  +  +     I +DL+ L    +         +     +   
Sbjct: 140 QGKTRQELGRSAFLDEVWRWKAEKG-AGIVEDLRKLGCSLNWQREYFTMDKQQAHAVNVA 198

Query: 277 IDNLARQGYV 286
            + L  +G +
Sbjct: 199 FERLFEEGLI 208


>gi|147677174|ref|YP_001211389.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083135|sp|A5D416|SYL_PELTS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146273271|dbj|BAF59020.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 827

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +   +   +   Y         K     +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEEKWQARWAAQDLYAVPDYSDRPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQ 69

Query: 158 GYEV 161
           GY V
Sbjct: 70  GYHV 73


>gi|150398926|ref|YP_001322693.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150011629|gb|ABR54081.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 459

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 106/318 (33%), Gaps = 49/318 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R  +  D +   + + GY     +Y+       N   +      + 
Sbjct: 28  CGPTTYAESHIGHARTYIAFDAIVRYLKYLGY---TVFYL------QNITDIDDKIIDKA 78

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            + + + DL   +Y   YL+ +     +      +NF         +   +   +KI+ +
Sbjct: 79  KIQSKNPDLLSKHYEKKYLEDM-----ENLGVNNVNFYARATEHTFE---IINQVKILIE 130

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
              A   ++ ++     F   +   +    I+ L       +G+    K     K   ++
Sbjct: 131 KGFAYETENGVYFEVSKFQ--EFGKLSNQNIEELNVHRVNPDGLKKDVKDFVLWKKVSEK 188

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVMGSDH 360
                         D P     G   +   D A  +  +   +D      ++I+      
Sbjct: 189 PCW-----------DSPWGF--GRPGWHIEDTAITEKYFGPKYDIHGGGLDLIF------ 229

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             + +   A   ++S +K  +   +      + +    KMSK   +FIT++ ++++  + 
Sbjct: 230 -PHHEAEIAQMESISGEKPMVKYWMHTG---FLNVNGTKMSKSLSNFITIKEILEKYNAL 285

Query: 421 SVRFMMLWRKNSELLDFD 438
             RF +L       +DF 
Sbjct: 286 EFRFFVLSTHYRSPIDFS 303


>gi|99035994|ref|ZP_01315036.1| hypothetical protein Wendoof_01000128 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 864

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 67/215 (31%), Gaps = 38/215 (17%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +I+  G +  R    K     I+      +G +H+GH       D +A      G +V 
Sbjct: 15  CNILWEGSKVYRWNGEKDNTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDVF 74

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
             Y I                        +D+ LP         K   KE+  +   E+ 
Sbjct: 75  --YPIG----------------------FDDNGLPTERLVEQTYKTRAKEVGREKFIEMC 110

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +   EK     K+              K++ I +D  +      +   +  +    +L  
Sbjct: 111 HEVIEKSKQEFKEL------------FKSVGISYDWDLEYHTISKETVTLSQMSFIDLYN 158

Query: 283 QGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTM 315
           +GY Y  + P        T     + +  +F S++
Sbjct: 159 KGYAYRKMQPILWDPVDKTAIAQAEIEDKVFESSL 193


>gi|90416602|ref|ZP_01224533.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331801|gb|EAS47029.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 940

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 41/263 (15%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVGDD 319
           + H      I  +   +  QG      L   +       D  +      + F S +  + 
Sbjct: 490 ELHPDTAQLIEQVASRVEEQGIEAWFELDAAELIGEDIADYQKVTDTLDVWFDSGVTHES 549

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
               ++ +     Y A                 +Y+ GSD   G+ +     A A++   
Sbjct: 550 ----VVNARQELRYPAD----------------LYLEGSDQHRGWFQSSLKTAIAINGTA 589

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               VL         D    KMSK  G+ I+ + V++++G+D +R  +     S  +   
Sbjct: 590 PYKAVLTHGF---TVDEHGRKMSKSIGNVISPQKVINDMGADVLRLWIASADFSSEMTVS 646

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++  ++ +             R I   A+    ++D     ++ +  E          
Sbjct: 647 -DEILSRAGD-----------SYRRIRNTARYFLSNIDGFDPAQHGVAHEDMLALDRWA- 693

Query: 499 IVHLAEYPRVIENATIAQEPYKL 521
           +   A     I  A    + + +
Sbjct: 694 VDCAAGLQEEIITAYNEFQFHLI 716


>gi|15828728|ref|NP_326088.1| valyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|81533027|sp|Q98QV4|SYV_MYCPU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14089670|emb|CAC13430.1| VALYL-TRNA SYNTHETASE (VALINE--TRNA LIGASE) (VALRS) [Mycoplasma
           pulmonis]
          Length = 827

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 55/182 (30%), Gaps = 33/182 (18%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             +Y  N        +I     N TG +H+GH     + D++       GY+V       
Sbjct: 20  DKKYFINHDLDKKPFSIILPPPNVTGQLHLGHALNGYLQDSVIRYKKLEGYDVL------ 73

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                ++   ++   + +++L   +  L +             +  DKY+          
Sbjct: 74  -FLPAMDHAGIATQIKVEESLAKEN--LLKQDIGREKFLKFSYQWKDKYA---------- 120

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                          II+     L +  D         +     +  +  +L   G +Y+
Sbjct: 121 --------------NIIKSQWNKLGLALDYSSERFTLDQDSKDTVNKVFIDLYNAGIIYQ 166

Query: 289 GI 290
           G+
Sbjct: 167 GV 168


>gi|19115319|ref|NP_594407.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|74675941|sp|O14000|SYMM_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|2388946|emb|CAB11680.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe]
          Length = 539

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
             +AA +   +  +      +         +KMSK  G+ +    ++++ G D++R+ +L
Sbjct: 302 FLMAAGLPLPEKILVHSHWTM-------NKVKMSKSLGNVVDPFWLIEKYGVDTIRYYLL 354

Query: 428 WRKN-SELLDFDFCKVKEQSKEN 449
            R   +   +FD  ++++  + +
Sbjct: 355 KRGRLTSDSNFDIEELEKDEEHD 377


>gi|71029466|ref|XP_764376.1| valyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351330|gb|EAN32093.1| valyl-tRNA synthetase, putative [Theileria parva]
          Length = 1010

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 57/201 (28%), Gaps = 36/201 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS----ANPTGPMHVGHCRCAVVGDT 149
           +P  + +   ++  S   +  +   +      ++VS     N TG +H+GH     + D 
Sbjct: 29  NPKSVEEGWYTLWESRKFFTPSSDPEALNTKNKWVSLLPPPNVTGSLHIGHALTVSIQDC 88

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       G         + AG    ++     ++        D +L             
Sbjct: 89  LTRWHRMKGDVTLWLPGTDHAGIATQSVVERTLYK--------DENLKRHDLGRTKFVEK 140

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
             E  DKY S                         I++ LK L    D         +  
Sbjct: 141 VFEWNDKYGSN------------------------IKNQLKRLGASLDWTREVFTMDQPR 176

Query: 270 PSPIRDIIDNLARQGYVYEGI 290
            + + +    L   G++Y   
Sbjct: 177 STAVIEAFVRLYDSGHIYRNT 197


>gi|319404814|emb|CBI78415.1| Leucyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    K   +I      +     G+  K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRAQEKKWQAIWDEKKIFQVADNGEHEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFHV 74



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 345 YERGFDNMIYV-MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR------------- 390
           + R    + YV +     G   +   V     ++K  ++     +V              
Sbjct: 563 FTRAMKMIGYVSVDEPFKGLFTQGMVVHETYQDEKGWVSPADVAIVEKDGKRHAYKLTDQ 622

Query: 391 -LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
              R G   KMSK   + +    ++   G+D+VR+ ML     E
Sbjct: 623 SEVRIGSIEKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPE 666


>gi|291545424|emb|CBL18532.1| glutamyl-tRNA synthetase, bacterial family [Ruminococcus sp. SR1/5]
          Length = 484

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 143/407 (35%), Gaps = 72/407 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+         + +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLITKHEGGDFILRI-----EDTDQERYVE------GAVDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G + G Y++       +  KY+ +L+   +  +        
Sbjct: 58  IYRTLEKTGLLHDEGPDKDGGF-GPYVQSERQATGMYLKYAKQLIEQGD-AYYCFCGKEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEGILPP 293
           +++M + +     ++  +  + +S+++  R    G+P  IR                   
Sbjct: 116 LESMKRTVAGKEISIYDKRCLHLSKEEVQRRLDAGEPHVIR----------------FNM 159

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P   TT   D+    +   +  +    D  L+KSDG  TY   + A     +  G  ++ 
Sbjct: 160 PTEGTTTFHDVIYGDITVNNEEM---EDLILIKSDGYPTY---NFANVIDDHLMGITHV- 212

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G+++     +   +  A   +      + C L+    D    K+SKR G   +   +
Sbjct: 213 -VRGNEYLSSSPKYNRIYEAFGWEIP--TYVHCPLIT---DETHQKLSKRCGHS-SYEDL 265

Query: 414 VDE--VGSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           +D+  V    + ++ L  W        F   ++ E    + +     A      +     
Sbjct: 266 IDQGFVTEAVINYVALLGWSPADNREIFSLPELVEAFDYHHINKSP-AVFDIAKLKWMNG 324

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE--------YPRV 508
           +    +D + F    +P   E    +  L   +A         +P +
Sbjct: 325 EYIKKMDPEAFYERALPYLKEVLKKDFDL-KKIAGMVQTRIEVFPDI 370


>gi|261855653|ref|YP_003262936.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836122|gb|ACX95889.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 685

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 38/214 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL  +  +   ++SED       + +++  D+  +   +     Y G   P         
Sbjct: 195 DLPKMQDRLKQWLSEDRVQPAIRAKLQEWFDSGLQAWDISRDAPYFGFEIPGAPGKFFYV 254

Query: 303 DMDR-----KQLLFRSTMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIYV 355
            +D         L  +   G D D    ++  +    +   D+AYF              
Sbjct: 255 WLDAPIGYIGAFLKLAESTGLDFDEYWGENAQTELIHFIGKDIAYF-------------- 300

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               H+ +     A       +             L  +G   KMSK  G FI  R  ++
Sbjct: 301 ----HTLF---WPATLMGAGLRTPTAVYAHGF---LTLNGE--KMSKSRGTFIQARTYLN 348

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +   ++R+    + +S + D D      + + N
Sbjct: 349 HLDPQALRYYFAAKLSSGIDDIDLSLEDFRLRVN 382


>gi|212703393|ref|ZP_03311521.1| hypothetical protein DESPIG_01436 [Desulfovibrio piger ATCC 29098]
 gi|212673138|gb|EEB33621.1| hypothetical protein DESPIG_01436 [Desulfovibrio piger ATCC 29098]
          Length = 939

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 15/140 (10%)

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344
           Y YE  L     +   KC     Q   +   + D      +  D   ++     A  + +
Sbjct: 506 YWYEAPLEEIVPEGL-KCPHCGGQHWEKEDDILD------VWFDSGTSFA----AVLETR 554

Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
            E      +Y+ GSD   G+      VA           VL    V    DG   KMSK 
Sbjct: 555 PELSAPADLYLEGSDQHRGWFHSSLLVAEGTRNDPPYKAVLTHGYVV---DGDGRKMSKS 611

Query: 404 AGDFITLRHVVDEVGSDSVR 423
            G+ I  + ++D+ G++ VR
Sbjct: 612 IGNVIAPQELIDKYGAEIVR 631


>gi|149921973|ref|ZP_01910415.1| glutamyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149817138|gb|EDM76618.1| glutamyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 500

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 89/277 (32%), Gaps = 27/277 (9%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           ++ +PTG  HVG     +     A      G +        D      +   ++    + 
Sbjct: 23  IAPSPTGDPHVGTAYIGLFNYVFAR---KHGGKFILRIEDTDRKRSTKSSEEAILAALRW 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                D     G   G Y +    +L  ++  +LL+                A ++  ++
Sbjct: 80  LGLEWDEGPDVGGPHGPYRQSERLDLYKRHVQQLLDAGL--AYRCFCTPERLADLRKQQE 137

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             KA    +D        H  D  P   +     R+    E  +   K   T  C ++  
Sbjct: 138 AAKASRYGYDR-------HCRDLDPAESL-----RRAEAGEPYVVRLKMPLTGTCVIEDG 185

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
                +   G+  D+ L KSDG  TY    LA     +E G  ++I   G +      + 
Sbjct: 186 LRGSINREYGESDDQVLQKSDGFPTYH---LANVVDDHEMGITHVIR--GEEWISSTPKH 240

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +  A   +  +        + L R+    K+SKR 
Sbjct: 241 IVLYEAFGWEAPRFFH-----LGLLRNPNGSKLSKRK 272


>gi|315924143|ref|ZP_07920369.1| glutamate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622545|gb|EFV02500.1| glutamate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 497

 Score = 41.4 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 96/295 (32%), Gaps = 53/295 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  L  L      +  R  Y      +  ++  
Sbjct: 7   APSPTGNVHVGSLRTALYNYLFAKQNNGQFLLRL-----EDTDRTRY------EEGSVGN 55

Query: 180 SVFWRYQQALYNNDSDLPEGYYP------GVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
            +   Y   +  ++  + E   P      G Y++     +  KY  +LL+  +  +    
Sbjct: 56  LLDALYTTGVVPDEGLMLEDGKPVQKGDCGPYIQSERLSIYQKYIRQLLDEGK-AYYCFC 114

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILP 292
               +  + K  +               E   + G    +  + I      G  Y   L 
Sbjct: 115 TRERLDDLRKKQK------------SAGETPRYDGRCKHLTPEEIQTRIDAGEPYVIRLK 162

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+       DM R  +   +  +    D+ L+K+DG  TY     A     +  G  ++
Sbjct: 163 LPEDTEITFDDMVRGTIAINTKELD---DQVLIKADGFPTYHF---AVVVDDHLMGITHV 216

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           I   G +      +   +      ++ Q   L   L     +    K+SKR GD 
Sbjct: 217 IR--GEEWLPSTPKHIYLYQCFGWEQPQYVHLPNIL-----NADHKKLSKRQGDV 264


>gi|329847393|ref|ZP_08262421.1| leucyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328842456|gb|EGF92025.1| leucyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 856

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +     R+   K     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 12  KQRQRWDDAQTFLTRDDPSKPKYYVLEMF-PYPSGRIHMGHVRNYAMGDLVARFKRARGF 70

Query: 160 EV 161
           +V
Sbjct: 71  DV 72


>gi|327403387|ref|YP_004344225.1| Isoleucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318895|gb|AEA43387.1| Isoleucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 1208

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 83/239 (34%), Gaps = 30/239 (12%)

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           + Y+ E  L  P S    K + D   + F S  +              + Y   +     
Sbjct: 654 KNYMDEITLVSP-SGLPMKRESDLIDVWFDSGAMPY----------AQWHYPFENKELID 702

Query: 343 CKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            +     D +    G D   G+   L A+A  +         ++   + L ++G  +KMS
Sbjct: 703 NRKSYPADFIAE--GVDQTRGWFYTLHAIA-TMCFDSVAFKNVMSNGLVLDKNG--LKMS 757

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE-QSKENPVFYVQYAYA 459
           K  G+ +     + + G D+ R+ M+      + L FD   + E Q K     Y  Y++ 
Sbjct: 758 KSKGNSVDPFETLTKYGPDATRWYMITNAQPWDNLKFDTDGITEVQRKFFGTLYNTYSFF 817

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                      ++ ++D   +    I  +   +     ++  L      ++ A  + EP
Sbjct: 818 ----------ALYANIDGFNYSEAEIALDQRPEIDRW-ILSKLNSLIAQVDEAYASFEP 865


>gi|325568223|ref|ZP_08144631.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158256|gb|EGC70408.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  YF   +          +D +       IY+ G++H+     Y +        +   
Sbjct: 495 GSSWYFLRFIDPHNKSVLADYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVV 554

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    V+++ G+D++R
Sbjct: 555 PTKEPFEKLFNQGMILGEN--NEKMSKSRGNVVNPDDVINQYGADTLR 600


>gi|301063341|ref|ZP_07203880.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442504|gb|EFK06730.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 932

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 18/186 (9%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       +     +    NVL    V    DG    M K AG+ I   
Sbjct: 559 LYLEGSDQHRGWFHSSLLCSVGTRNQAPYGNVLTHGFVV---DGKGKAMHKSAGNVIPPE 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++   G++ +R  +      + +      ++  +          AY R R+  R     
Sbjct: 616 SLIKSYGAEILRLWVAGEDYRDNIRLSKEILQRLTD---------AYRRIRNTCRYLLGN 666

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531
             D D +    +V+P     +  +  L   L      I +A  + E + +  +L++   +
Sbjct: 667 LQDYDPE---TDVVPYGQMDELDQWALHQ-LQGLNDRIMSAYESFEFHLVYHHLHNFCVL 722

Query: 532 -FHGHW 536
                +
Sbjct: 723 DLSSFY 728


>gi|259417508|ref|ZP_05741427.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346414|gb|EEW58228.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 881

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 61/209 (29%), Gaps = 36/209 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            K   +   + I        K     +E     P+G +H+GH R   +GD +A       
Sbjct: 11  AKWQKAWEEAAIFQANEDHSKPKYYVLEMF-PYPSGKLHMGHVRNYTMGDVIARYKLSTG 69

Query: 153 --LMAFSGYEVTREY----------YINDA--------GAQINTLALSVFWRYQQALYNN 192
             ++   G++               +  D           Q+  L LS+ W    A  + 
Sbjct: 70  HNVLHPMGFDAFGMPAENAAMASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCD- 128

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
               PE Y     L     E    Y    +   +   + ++ +  V+A        L   
Sbjct: 129 ----PEYYGQQQALFLDFLEKGLVYRKNAVVNWDPVDMTVLANEQVEAGRGWRSGALVER 184

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
                 F    D+       + D +D L 
Sbjct: 185 RELTQWFFKISDY----SDELLDALDGLE 209


>gi|256827875|ref|YP_003156603.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577051|gb|ACU88187.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +           +  ++   G K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 9   IEEKWQQAWEEKACFRTDMSRDGEKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARYKRMQ 68

Query: 158 GYEV 161
           G+ V
Sbjct: 69  GFNV 72


>gi|226226665|ref|YP_002760771.1| glutamyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089856|dbj|BAH38301.1| glutamyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 483

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 98/287 (34%), Gaps = 45/287 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A    F G  + R   I D   Q  +   S    ++  
Sbjct: 12  APSPTGFLHVGGARTALFNWLYAK--KFDGDFLLR---IEDTDRQ-RSTDESTRAIFEGL 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
            +   S   +  Y G  +        D++ ++     E       +D++  A+ + +R +
Sbjct: 66  EWLGLSWDEDVVYQGANV--------DRHYADAHRLLETG--AAYRDFTSPAVTEQLRAE 115

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A         +  D    + +      + LAR       I       TT+  D+   +
Sbjct: 116 AEARGEAFRFDRATADLSEAETA------ERLARNE--PYAIRFRVPDGTTEWDDLVHDR 167

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAA----DLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           + F +  + D +   +L+S+G+  Y  A    D+A       R         G DH    
Sbjct: 168 IAFPNKDIEDFI---ILRSNGTPVYNLAVVSDDIAMRVTLVLR---------GDDHISNT 215

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +   +  A+     Q        V +       K+SKR G      
Sbjct: 216 PKQILLYEALGATVPQFGH-----VPMIHGTDGKKLSKRHGATAVGD 257


>gi|242278126|ref|YP_002990255.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121020|gb|ACS78716.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 831

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 27/114 (23%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            K        G         +     +E     P+G +H+GH R   +GD +A       
Sbjct: 13  NKWQKEWTEKGAFNVEADESRPKYYVLEMF-PYPSGKIHMGHVRNYSIGDVVARYKRMKG 71

Query: 153 --LMAFSGYE---------VTREY-Y--------INDAGAQINTLALSVFWRYQ 186
             ++   G++           +   +        I+D   Q+  L  S  WR +
Sbjct: 72  FNVLHPMGWDAFGLPAENAAIKHNTHPAEWTYANIDDMRTQLKRLGYSYDWRRE 125



 Score = 37.6 bits (86), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 19/133 (14%)

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           L     + +DG   KMSK  G+ +    ++++ G+D+ R  +L+    E    D     +
Sbjct: 572 LLTQGMVLKDGA--KMSKSKGNVVDPNAMINKYGADATRLFILFASPPEK---DLEWSDQ 626

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
             +         A+     I+R A++    L              E  +   +L   L E
Sbjct: 627 GLEG--------AHRFLNRIWRLAEEFEGKLS---ATGACAKPSMELSSDAKKL--RLKE 673

Query: 505 YPRVIENATIAQE 517
               ++ A+   E
Sbjct: 674 -HETVKRASRDME 685


>gi|171780192|ref|ZP_02921096.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281540|gb|EDT46975.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 667

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 109/350 (31%), Gaps = 78/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       Y+V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  ++L+   +K++    DY  + + ++    L  
Sbjct: 66  -------GITPQAYVDGMAADVKKLW--KMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLA------YFKCKYERG 348
              R     D            ++ DG               DLA       +  K    
Sbjct: 171 YFLRLGKYADRLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSN 230

Query: 349 FDNMIYVM-----------GSDHSGY-----VKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             +++YV            G     +           V   V +   + + +   ++ + 
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQEEHANFDNFWNEGTVFHMVGKDILRFHSIYWPIMLMM 290

Query: 393 RDGM--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 LDMKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 340


>gi|170750501|ref|YP_001756761.1| leucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170657023|gb|ACB26078.1| leucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 861

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +     +    N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 15  AKDAEPRWQEAWAEKRLFETDNSDPRPKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARY 73

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 74  KRARGFNV 81


>gi|209549396|ref|YP_002281313.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535152|gb|ACI55087.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 98/328 (29%), Gaps = 41/328 (12%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q     
Sbjct: 16  PNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGITAQALADR 75

Query: 192 NDSDLPEGYYP----GVYLKHVGKELADKYSSELLNFPEEKWLPIVKD-------YSVQA 240
           N  +                   +E   + S  + N   E    I KD          +A
Sbjct: 76  NSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENG-DIYKDSYAGWYSVRDEA 134

Query: 241 MMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
             +    +L+A  +++        ++ E  +          ++ +               
Sbjct: 135 YYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHYEANPDFIGPAERRN 194

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
            +        +   + R    +   +  D      +  D    Y  A   Y + +     
Sbjct: 195 EVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYITA-TGYIEDRNGPRA 253

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                D  ++++G D    + R  AV   A  +S K      +      L +     KMS
Sbjct: 254 KYWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG---EKMS 304

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           K  G+ +   ++V   G D VR+  L  
Sbjct: 305 KSLGNVVDPVNLVSHFGLDQVRYFFLRE 332


>gi|149370164|ref|ZP_01890015.1| putative valyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356655|gb|EDM45211.1| putative valyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 877

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 62/216 (28%), Gaps = 35/216 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y++ +   K  S  +     Y  + +       I     N TG +H+GH     + D L 
Sbjct: 7   YIAKNVEDKWYSYWMQHN--YFHSEVDDREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLI 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+      ++                        + + +         LK  G 
Sbjct: 65  RRARLKGFNAC---WV---------------------PGTDHASIATEAKVVARLKEQGI 100

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           + AD           E++L    D+  +    +I D LK L    D   ++         
Sbjct: 101 DKAD--------LTREEFLKHAWDW-TEEYGGVILDQLKKLGASCDWERTKFTLDPNMSQ 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +     +L  +G +Y G          +    D +
Sbjct: 152 QVIKSFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEE 187


>gi|91225859|ref|ZP_01260828.1| glutamyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91189509|gb|EAS75785.1| glutamyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 475

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 95/279 (34%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MEWLGLEWDEGPYYQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            + +N +          +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 -QEVNKEMPR-------YDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +  R+  +    D  + ++DG+ TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEIRNDQMD---DLIIRRTDGAPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|89054449|ref|YP_509900.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|109894905|sp|Q28QY7|SYC_JANSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88863998|gb|ABD54875.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 453

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 117/358 (32%), Gaps = 53/358 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFS-GYEVTR--EYYINDAGAQINTLALSVFWRYQQALYNND 193
           H+G+ R AVV D L  L+    G E       +  D   +IN  AL+             
Sbjct: 39  HLGNARSAVVFDQLFRLLRHVYGAENVTFVRNFT-DVDDKINARALAEGREIADLTAETS 97

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
               +       L       A +Y +E++ F E+                  RD      
Sbjct: 98  QWYLDDTRALGVLDPNHMPRATEYIAEMVAFIEDLIAKGF---------AYARDGHALFR 148

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           ++     S DD+ +     + D+I                       K D     L   S
Sbjct: 149 VR-----SFDDYGKLSGRSVDDMIAG-------------ARVEVAPYKEDPMDFVLWKPS 190

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLE 368
           +      D P  +    +    + +A+        FD  I+  G+D     H   V +  
Sbjct: 191 SDDIPGWDSPWGRGRPGWHIECSAMAHAL--LGEQFD--IHGGGADLMFPHHENEVAQSC 246

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMML 427
           A     +        +  E++++       KMSK  G+F T+R ++D+ V  + +RF+ML
Sbjct: 247 AAGHGFANIW-----MHNEMLQV----EGKKMSKSLGNFFTVRDLLDQGVPGEVIRFVML 297

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
                + +  D+ + K    E  +    YA  R     ++A     D   D     + 
Sbjct: 298 STHYGKPM--DWTEKKRAEAEATLRKW-YAALRQSVAEQEATPHLVDSLADDLNTALA 352


>gi|58040203|ref|YP_192167.1| glutamyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|67461869|sp|Q5FQ35|SYE2_GLUOX RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|58002617|gb|AAW61511.1| Glutamyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 444

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 86/276 (31%), Gaps = 38/276 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG+ R AV     A     +G +      I+D               Y++A
Sbjct: 6   APSPTGYLHVGNARLAVANFLFAR---HNGAKFLLR--IDDTDTTRGKP------EYEEA 54

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +  + S L  G     Y++    E  D+Y+  +        L    +   +   K     
Sbjct: 55  IGKDLSWL--GLKWDEYVRQ--SERLDRYAEVIEKLKASGRLYPCFETEYELNAKREARI 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-YEGILPPPKSKTTQKCDMDRK 307
                  +D         R       D        G   +        S+  Q   MD  
Sbjct: 111 RAGKAPIYD---------RAMLKLTADQRARAEANGKTPHWRFRLSDGSRKWQDLVMDEC 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            +   +       D  L++ DG+  Y    LA      + G  ++  V G DH       
Sbjct: 162 SVKLTAI-----SDPVLVRGDGTILYT---LASVIDDLDMGITHI--VRGEDHVTNTGVQ 211

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
             +A A+  K          L+     G   K+SKR
Sbjct: 212 IDIAEALGAKPDHFTFAHLPLLLDSDGG---KLSKR 244


>gi|332883213|gb|EGK03496.1| isoleucyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 1136

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A++    +  +  NV+   LV    D    KMSKR G+ I     +D
Sbjct: 645 GVDQTRGWFFTLHAISTMFKDSISFKNVVSNGLV---LDKNGQKMSKRLGNAIDPFETID 701

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFR 466
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA     S   
Sbjct: 702 KYGSDPLRWYMITNASPWDNLKFDIEGVEEVRRKFFGTLYNTYSFFALYANVDNFSFKE 760


>gi|297182280|gb|ADI18449.1| valyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF4000_13G19]
          Length = 928

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 62/213 (29%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +  +  G+   + I     N TG +H+GH     + DTL    
Sbjct: 7   PDSIEQAWYQTWEKAGHFRPSGEGQSFAMMI--PPPNVTGSLHMGHAFQDTIMDTLVRYR 64

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G     +   + AG     +                               V + LA
Sbjct: 65  RMQGRNTLWQVGTDHAGIATQMV-------------------------------VERRLA 93

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +  ++      E++L  V ++  ++    I   L+ +    D          G  + +R
Sbjct: 94  AE-GTDRHELGRERFLDKVWEWKAESG-GTITQQLRRMGSSVDWSRERFTMDDGLSNAVR 151

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           ++   L  +G +Y G               D +
Sbjct: 152 EVFVRLHSEGLIYRGKRLVNWDPALHTAISDLE 184


>gi|302039506|ref|YP_003799828.1| leucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607570|emb|CBK43903.1| Leucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 811

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ GS+H+     Y +    V               L+ + + L  D    KMSK  G+
Sbjct: 535 LYIGGSEHAVLHLLYSRFWHKVLFDAGVVSTPEPFKKLVHQGIVLGED--NQKMSKSRGN 592

Query: 407 FITLRHVVDEVGSDSVR 423
            +    ++D+ G+D+VR
Sbjct: 593 VVNPDEMIDQFGADAVR 609


>gi|317154500|ref|YP_004122548.1| glutamyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944751|gb|ADU63802.1| glutamyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 465

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 90/294 (30%), Gaps = 56/294 (19%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +   + +PTG +H+G  R A+    LA                            S  
Sbjct: 3   KIVSRFAPSPTGFLHIGGARTALFSWLLAR---------------------------SKG 35

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA-- 240
             ++  + + D +          +  +     D     +           V D  + A  
Sbjct: 36  GEFRLRIEDTDRERSTDEATRAIIDSMRWLGLDHDGEIVHQSARADRHNEVIDQMIAAGH 95

Query: 241 --MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII-DNLARQGYVYEGILPPPKSK 297
               +  ++D+ A+         E     G          D     G V    L  P++ 
Sbjct: 96  AYYCQCSKEDVDAMR--------EKAMAEGGKPKYDGTCRDRGLTSGVVR---LKAPQAG 144

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   DM +  ++  +  +    D  L ++DGS TY   +LA     ++ G  +++   G
Sbjct: 145 ATAFRDMVKGPIVVANAEMD---DMILRRTDGSPTY---NLAVVVDDHDMGVTSVLR--G 196

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            DH     R   +  A++    +        V +       K+SKR G    + 
Sbjct: 197 DDHVNNTPRQILIYQAMNWDVPEFGH-----VPMILGPDKKKLSKRHGALSVME 245


>gi|261493681|ref|ZP_05990200.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494348|ref|ZP_05990842.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309997|gb|EEY11206.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310681|gb|EEY11865.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 692

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 64/214 (29%), Gaps = 38/214 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL +       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPSFEGMLKEWTRSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D D    K   +  Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     + 
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQANTYLK 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +  + +R+    + N  + D DF       + N
Sbjct: 348 HLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVN 381


>gi|94496575|ref|ZP_01303151.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423935|gb|EAT08960.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 851

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P        ++      +  N      +  +  +   P+G +H+GH R   +GD LA
Sbjct: 4   RFNPLEADARWQAVWDEKQSFRANDASPKPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLA 63

Query: 152 SLMAFSGYEV 161
                +G+EV
Sbjct: 64  RFRRMTGHEV 73



 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           KK+  +    E       G   KMSK   + +    ++++ G+D+VR+ ML     E
Sbjct: 601 KKSGDDYTHIESGAPVTVGRVEKMSKSKKNVVDPDDIIEQYGADAVRWFMLSDSPPE 657


>gi|289577959|ref|YP_003476586.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527672|gb|ADD02024.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 879

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 88/249 (35%), Gaps = 42/249 (16%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      +  K+     +L     L 
Sbjct: 470 TQDLKYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFM--KEVPFKHVLIHG--LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V++E G+D++RF ++        D  F + K +   N  F
Sbjct: 519 RDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNAPGN-DMRFSQDKVELSRN--F 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A    +         D D +L+   +   +             L  Y  +++  
Sbjct: 576 ANKLWNASRYVLLN-----LTDNDTNLYTDGLTIADKWI----------LTRYNSIVKEV 620

Query: 513 TIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           T   E ++L   A  LYD   S F   +      P L       +K+T   L        
Sbjct: 621 TENLEKFELGIAATKLYDFVWSEFCDWY-IELSKPVLYSDNLEAKKVTKSVL------RY 673

Query: 569 IINSGLNII 577
           ++++ L ++
Sbjct: 674 VLDNTLRLL 682


>gi|261332101|emb|CBH15094.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 773

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 57/421 (13%), Positives = 126/421 (29%), Gaps = 67/421 (15%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH    ++ D +       G  V      ++ G ++   A        
Sbjct: 250 YVNAAP----HIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQVSPY 305

Query: 187 QALYNNDSDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEK-WLPIVKDYSVQAM 241
                   +  + +    Y   Y      E       EL    E+K  + + +     ++
Sbjct: 306 DFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEGWYSI 365

Query: 242 MKIIRDDLKAL--NIQHD--------------IFISEDDFHRGDPSPIRDIIDNLARQ-G 284
                   + +   +  D               ++SE+++     +    +++      G
Sbjct: 366 SDESFLTPQNITDGVDKDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERLLEWYHANPG 425

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTYFAA- 336
            +          +  +K   D      + T+        G+      +  D    Y    
Sbjct: 426 CIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLDALTNYLTGS 485

Query: 337 ----DLAYFKCKYERGFDNM------IYVMGSD----HSGYVKRLEAVAAAVSEKKAQIN 382
               D +  +      F+ +      ++V+G D    H+ Y     A   +      +  
Sbjct: 486 RLRVDESGKEVSLVDDFNELERFPADVHVIGKDILKFHAIY---WPAFLLSAGLPLPKKI 542

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
           V      +  +     K+SK  G+        +E G D++++ +L     S+  D+    
Sbjct: 543 VAHGWWTKDRK-----KISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDKN 597

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +  +        +     RC S          +++ +        +E   D S +QLI  
Sbjct: 598 MIARLNGELADTLGNLVMRCTS-------AKINVNGEWPSPAAYTEE---DESLIQLIKD 647

Query: 502 L 502
           L
Sbjct: 648 L 648


>gi|221195817|ref|ZP_03568870.1| isoleucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184291|gb|EEE16685.1| isoleucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 937

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 81/218 (37%), Gaps = 25/218 (11%)

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIK 399
           K + E  F   +Y+ GSD   G+   + ++  +V     A    ++ +   L  DG   K
Sbjct: 564 KHRPELRFPADMYLEGSDQHRGWF--MSSLMTSVGAYDMAPYKAVVSQGFTL--DGQGRK 619

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V  E G+D +R  +     S  +  D   +  Q  +        AY 
Sbjct: 620 MSKSLGNVIDPNKVCAERGADVLRLWVASVDTSNDVPCD-DAILAQVGD--------AYR 670

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+  R    +  +L+    P       ++    +  ++  + E   V+  A       
Sbjct: 671 RFRNTIR---FLLGELEGQFNPATDAVPVAKLTAYDRLVLARMCEVHDVVTEAYEGYRFN 727

Query: 520 ----KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553
                L  Y+ +L+   +G+ +  ++        + +R
Sbjct: 728 NVFRVLYDYIIELS---NGYLNATKDRMYCDAADSESR 762


>gi|213410098|ref|XP_002175819.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003866|gb|EEB09526.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 873

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L +   +  +  S+  ++     + +  +   +   F    P+G +H+GH R   + D L
Sbjct: 29  LKIDQKWKTETYSNHDLNNEGSKKQITKEKMYILSMF--PYPSGSLHMGHVRVYTIADLL 86

Query: 151 ASLMAFSGYEVT 162
           A      GYEV 
Sbjct: 87  ARFYRMKGYEVI 98


>gi|209964481|ref|YP_002297396.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
 gi|209957947|gb|ACI98583.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
          Length = 520

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 110/363 (30%), Gaps = 52/363 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    V  D +A      G++V      ++ G ++   A       +Q    N  + 
Sbjct: 21  HIGHAYTTVACDVMARFKRLDGFDVKFLTGTDEHGQKVQKSAELAGITPKQMADRNSENF 80

Query: 197 PEGYY-----PGVYLKHVGKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMK 243
            E           +++           +      E   + +        V+D +     +
Sbjct: 81  RELARLLNVSNDDFIRTTEPRHVTAVQALWQRLQESGDVYLGSYSGWYSVRDEAYFGEDE 140

Query: 244 IIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEG--ILPPPKSKTT 299
           ++  D +          ++ E  +     +    +++       +YE       P  K +
Sbjct: 141 LVERDGRRFAPTGAPVEWVEEPSYFFRLSAWQERLLE-------LYESRPDFILPAGKRS 193

Query: 300 QKCDMDRKQL----LFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
           +     R  L    + R+T      + GD+     +  D    Y  A + Y +      +
Sbjct: 194 EVVSFVRGGLRDLSISRTTFDWGIPVPGDEKHVMYVWLDALTNYITA-IGYPETGEGTLY 252

Query: 350 DNM----IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                  ++++G D    H+ Y     A   A   +  +                  KMS
Sbjct: 253 GRFWPADLHMVGKDILRFHAVY---WPAFLMAAGLEPPRRVFAHGWWTV-----EGEKMS 304

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ +    ++   G D  R+  L R+     D DF +     + N      Y     
Sbjct: 305 KSLGNVVKPEELIGTYGLDQTRYF-LMREIPFGNDGDFSRRAMVQRINGELANDYGNLVQ 363

Query: 462 RSI 464
           R +
Sbjct: 364 RVL 366


>gi|254361962|ref|ZP_04978093.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093509|gb|EDN74489.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 692

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 64/214 (29%), Gaps = 38/214 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL +       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPSFEGMLKEWTRSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D D    K   +  Y +   D+ YF              
Sbjct: 254 WLDAPIGYIASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     + 
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQANTYLK 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +  + +R+    + N  + D DF       + N
Sbjct: 348 HLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVN 381


>gi|148377404|ref|YP_001256280.1| valyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291450|emb|CAL58835.1| Valyl tRNA synthetase (Valine tRNA ligase)(VALRS) [Mycoplasma
           agalactiae PG2]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 33/197 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS   K +S   V    + ++ + K     +     N TG +H+GH     + DT+   
Sbjct: 9   TPSKFEKAVSKKWVDKKIFSKHDLTKKPFSLL-LPPPNVTGALHIGHALDQHIQDTILRF 67

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY+    +YI  AG  ++   ++   +                        V + L
Sbjct: 68  KKLEGYDT---FYI--AG--MDHAGIATQSK------------------------VERIL 96

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +           EK+L  + ++  +      R     L I  D         +     +
Sbjct: 97  METEGVNKHTLGREKFLERIWEWK-EEYANKFRKQWHLLGIGLDFERERFTLDKLSNDAV 155

Query: 274 RDIIDNLARQGYVYEGI 290
             +   L  +G +Y+  
Sbjct: 156 NKVFIELYNRGLIYKDT 172



 Score = 38.0 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 25/195 (12%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+       + KK    VLL  LV   RD    KMSK   + +    +++E GSD++
Sbjct: 482 WVVRMYFFGLEFTGKKPFETVLLHGLV---RDEQNRKMSKSLNNGVDPSKIIEEYGSDAL 538

Query: 423 RFMMLWRKNSELLD-FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
           RF ++      L   F   KV+                +  +I R    +  D +F    
Sbjct: 539 RFFLVTNSTPGLDTRFSLEKVRVA--------WGLC-NKLWNIARYIDMLDDDSNFKPSA 589

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGR 540
            ++            ++   +  Y   +  A           ++Y   + F   +    R
Sbjct: 590 ADIWINNKLKHLQ-NKITKAMNRYELTV--AGTELS-----NFIY---NDFSSWYIELLR 638

Query: 541 ENPRLRFVQANNRKL 555
             P  ++   N RKL
Sbjct: 639 IYPNKKYALENLRKL 653


>gi|146420546|ref|XP_001486228.1| hypothetical protein PGUG_01899 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 502

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 93/292 (31%), Gaps = 56/292 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA                N  G  +  L  +   R  + 
Sbjct: 38  APSPTGFLHLGSLRTALYNYLLAK---------------NTGGQFLLRLEDTDQKRLVEG 82

Query: 189 LYNN------------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
              N            D    +G   G Y +     +  +Y+ EL+              
Sbjct: 83  AEENIYRSLKWCGIEVDEGPQQGGPYGPYRQSDRTSIYQRYAEELIQLGHAYRCS----- 137

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
             Q  +  +RD   AL     +       H  +P    DII   +   Y     L     
Sbjct: 138 CSQERLLFLRDSAAALKPPTTVTYDRKCLH--NPLETGDIIRFKSPSVYEPFDDLLHGHL 195

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
              Q+ + D ++            D  +LKSDG  TY  A++       +     + +V+
Sbjct: 196 NLQQQYNSDDRR----------YDDFVILKSDGLPTYHFANV------VDDHLMRITHVI 239

Query: 357 -GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            G +      +  A+  A   +  Q        + L       K+SKR+GD 
Sbjct: 240 RGEEWLPSTPKHIALYRAFGWEPPQFTH-----IPLLTSMADKKLSKRSGDI 286


>gi|116252220|ref|YP_768058.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256868|emb|CAK07962.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 97/327 (29%), Gaps = 39/327 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q     
Sbjct: 16  PNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQTARAEGITAQALADR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N  +              +++   +   +   +      +   +             +A 
Sbjct: 76  NSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADSGDIYKDSYAGWYSVRDEAY 135

Query: 242 MKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
            +    +L+A  +++        ++ E  +          ++ +                
Sbjct: 136 YQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHYEANPDFIGPAERRNE 195

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-----Y 345
           +        +   + R    +   +  D      +  D    Y  A   Y + K      
Sbjct: 196 VISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYITA-TGYIEDKNGPRAK 254

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
               D  ++++G D    + R  AV   A  +S K      +      L +     KMSK
Sbjct: 255 YWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG---EKMSK 305

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +   ++V+  G D VR+  L  
Sbjct: 306 SLGNVVDPVNLVNHFGLDQVRYFFLRE 332


>gi|238693262|sp|B4RX92|SYL_ALTMD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 867

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  N   +  K     +   P+G +H+GH R   +GD ++  
Sbjct: 7   NPKDIEQRVQQYWEENQSFKANDDVEKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRF 66

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 67  QRMQGKNV 74


>gi|159904351|ref|YP_001551695.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159889527|gb|ABX09741.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 933

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 95/305 (31%), Gaps = 32/305 (10%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI----FISED 263
            V  E         L   E ++ P   +   +  +  IRD   +  +        +    
Sbjct: 379 FVRMEPMADRCRAHLVKGEPQFFPTRWEKVYRDWLTGIRDWCISRQLWWGHRIPAWFVVS 438

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDD 319
           +           I+     +  +             Q  D+        L   ST+   D
Sbjct: 439 ETDSIVTDHTPYIVALSEEEALLQAREKFGDDVAIEQDADVLDTWFSSGLWPFSTLGWPD 498

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
            D     SD +  Y    L         GFD +I+         V R+  +A A + +  
Sbjct: 499 EDD----SDFNCWYPTNTLVT-------GFD-IIFFW-------VARMTMMAGAFTGQMP 539

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
             +V +  LV   RD    KMSK  G+ I    ++D  G+D++RF ++        D   
Sbjct: 540 FKDVYIHGLV---RDEQNRKMSKSLGNGIDPLVLIDRYGTDALRFALVKEVAGAGQDIRL 596

Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
              ++      V   +    +  +  R A        FD     +    S+   S+  ++
Sbjct: 597 DYDRKTDTSVTVEAARNFANKLWNATRFALINLGTTTFDETFEEL--NFSDLQLSDKWIL 654

Query: 500 VHLAE 504
             LA 
Sbjct: 655 SRLAR 659


>gi|254193486|ref|ZP_04899920.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169650239|gb|EDS82932.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 967

 Score = 41.4 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 519 RSLHPRSARLVEAVAARVERGGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 578

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++ G+  Y A                 +Y+ G+D   G+         A   + 
Sbjct: 579 VYRDAARA-GTGGYPAD----------------LYLEGADQHRGWFGASLMTGCAADGRA 621

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 622 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 678

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 679 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 726

Query: 499 IV 500
             
Sbjct: 727 AR 728


>gi|289547884|ref|YP_003472872.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181501|gb|ADC88745.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 604

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +       +          +E     P+G +H+GH R   +GD +A  +   G
Sbjct: 13  WQKIWEEKGVFKTEEKGEKVYVLEMF-PYPSGRIHMGHVRNYTIGDAIARFLRMRG 67


>gi|282881167|ref|ZP_06289854.1| glutamate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304971|gb|EFA97044.1| glutamate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 512

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 94/290 (32%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTGP+H+G  R A+     A      G  V R     D    +   
Sbjct: 1   MAERKVRVRF-APSPTGPLHIGGVRTALYNYLFAR--QHGGDFVFRIE-DTDTNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++      D  +  G   G Y +   +++  KY  +LL   +  ++       
Sbjct: 57  EAYILESFKWLGIQFDEGVSFGGEHGPYRQSERRDIYKKYVKQLLEEGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A  K I                     R   +  ++  D     G  +          
Sbjct: 116 LDAKRKEID--------NFQYDAHTRTQMRNSLTMSKEECDQRIADGEQFVVRFKIEPGV 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R +++ +S ++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 EVHVQDMIRGEVIVKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A     A    L   L  L +     K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYQAFG--WADTMPLFAHLPLLLKPEGKGKLSKRDGD 267


>gi|254292383|ref|YP_003058406.1| leucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254040914|gb|ACT57709.1| leucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 860

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            +K  +   +   +             +E     P+G +H+GH R   +GD +A     +
Sbjct: 14  WQKAWADAQIFEAKTPAEAGDMPKAYVLEMF-PYPSGRLHMGHVRNYAMGDVVARFHISN 72

Query: 158 GYEV 161
           GY V
Sbjct: 73  GYNV 76


>gi|192291231|ref|YP_001991836.1| valyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192284980|gb|ACF01361.1| valyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 957

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +      V +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFMDDVPFPTVYIHALV---RDEKGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   +++DE G+D++RF +
Sbjct: 579 VIDPLNLIDEYGADALRFTL 598


>gi|126651278|ref|ZP_01723485.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591807|gb|EAZ85890.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 720

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     K     L  + + L       KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEG--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +++  G+D++R
Sbjct: 584 VVNPDEIIESHGADTLR 600


>gi|116074843|ref|ZP_01472104.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
 gi|116068065|gb|EAU73818.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 41/194 (21%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L      +     +        +           F    P+G +H+GH R  V+ D +A 
Sbjct: 21  LDTEQRWQSHWKDIDLDSTPAADDPRPPFYALSMF--PYPSGSLHMGHVRNYVITDVIAR 78

Query: 153 --------LMAFSGYE------------------VTREYYINDAGAQINTLALSVFWRYQ 186
                   ++   G++                  V  ++ I     Q+  L LS+ W  +
Sbjct: 79  VQRMRGDAVLHPMGWDAFGLPAENAAIERGIDPGVWTDHNIGQMRDQLGRLGLSIDWTRE 138

Query: 187 QALYNNDS---------DLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWL--PIV 233
           QA  ++D          +L +G         V  +  D+   ++E ++   + W    +V
Sbjct: 139 QATCHDDYYRWTQWLFLELQQGGLAYQKEAQVNWDPIDQTVLANEQVDADGKSWRSGAVV 198

Query: 234 KDYSVQAMMKIIRD 247
           +   ++     I D
Sbjct: 199 EKRLLRQWFLKITD 212


>gi|312898858|ref|ZP_07758246.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620020|gb|EFQ03592.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 827

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       S  +   +  GK     +E     P+G +H+GH R   +GD +A     +GY
Sbjct: 12  KWQGVWAESHADKTPDNNGKPPYYVLEMF-PYPSGNLHMGHVRNYTIGDVIARYRRMNGY 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|312882703|ref|ZP_07742440.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369664|gb|EFP97179.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 857

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPQEIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|290968885|ref|ZP_06560422.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781181|gb|EFD93772.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 826

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 43/188 (22%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS----- 152
            ++I       G    +N   +     +E     P+G +H+GH R   +GD +A      
Sbjct: 13  WQEIWRQEHRDG---CKNEDARPPYYVLEMF-PYPSGNLHMGHVRNYTIGDVMARYRRMK 68

Query: 153 ---LMAFSGYE---------VTREYY---------INDAGAQINTLALSVFWRYQQALYN 191
              ++   GY+           +            I +   Q   L LS  W  + A  +
Sbjct: 69  GFNVLHPMGYDAFGMPAENAAIKHNIPPAEWTYKNIENMTRQQRELGLSYDWDREVATCH 128

Query: 192 NDS-----DLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
            +       + E +Y     Y K       +  ++ L N        ++     +    +
Sbjct: 129 EEYYKWTQWIFELFYKRGLAYRKEAKVNWCEHCNTVLANE------QVIDGTCWRCDQPV 182

Query: 245 IRDDLKAL 252
           ++ DLK  
Sbjct: 183 VKKDLKQW 190


>gi|39935649|ref|NP_947925.1| valyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562628|sp|Q6N6N1|SYV_RHOPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39649502|emb|CAE28024.1| valyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 957

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +      V +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFMDDVPFPTVYIHALV---RDEKGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   +++DE G+D++RF +
Sbjct: 579 VIDPLNLIDEYGADALRFTL 598


>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|81485032|sp|Q8RH47|SYI_FUSNN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 933

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 91/265 (34%), Gaps = 28/265 (10%)

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I ++   +E+ FH+     I D++       +V +        +   K ++   +L   +
Sbjct: 474 IFYNDETNEEIFHKEILDRICDLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKET 533

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAA 372
            ++    D       GS       +        R  D  +Y+ GSD   G+       + 
Sbjct: 534 NIMDVWFD------SGSSH---RGVLEVWEGLHRPCD--LYLEGSDQHRGWFHTSLLTSV 582

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A +      +VL    V    DG   KMSK  G+ ++   V+   G+D +R         
Sbjct: 583 ASTGDSPYKSVLTHGFVN---DGEGKKMSKSLGNTVSPEDVIKVYGADILRLWCGSVDYR 639

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + +      VK+ S+         AY R R+  R    +    DF+     V  ++   +
Sbjct: 640 DDVRISDNIVKQMSE---------AYRRIRNTAR--YILGNSYDFNPKTDKVAYKDM-LE 687

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
             +  L   L    R +  +    E
Sbjct: 688 IDKWAL-NKLEVLKRSVTESYDKYE 711


>gi|87307315|ref|ZP_01089460.1| glutamyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290055|gb|EAQ81944.1| glutamyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 525

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 106/360 (29%), Gaps = 35/360 (9%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  V R   I+D   Q N             
Sbjct: 7   APSPTGYLHIGGVRTALFNWLFAK--RHGGQFVLR---IDDTDQQRNV--DEALAPILHG 59

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                 D  EG         VG      Y S+ L   +     ++ D           ++
Sbjct: 60  FRWLGMDWDEGP-------EVGGPFEPYYQSQRLERYQTAAKKLLAD-GFAYYDYATPEE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L A     +       + R   +           +G  +   L  P+       D  R  
Sbjct: 112 LDAERKAAEAAKRPFQYSRAYMAETEAERAKWEAEGRSFVVRLKMPREGVCAFNDSVRGD 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F       + D  + ++DG+  Y    LA     ++    ++I     +H     R  
Sbjct: 172 VEF---QWSKENDHVIQRADGTCLYH---LASVVDDHDLEITHVIR--AEEHLSNTPRQI 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA-GDFITLRHV--VDEVGSDSVRFM 425
            +  ++  +  Q   L      +   G   K+SKR    ++       ++E G      +
Sbjct: 224 FIGQSLGYELPQYAHLPY----VAEPGSKNKLSKRKLEKYLKNADFKRLNEHGQAIAEQI 279

Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVF--YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
            L         F+   V        +    + Y      S+  + +D+  D     F   
Sbjct: 280 KLQTSAET---FNPVIVDFYELTGYLPEAILNYLVLLGWSLDDKTEDLTIDEMIANFSLE 336


>gi|103486320|ref|YP_615881.1| glutamyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123078514|sp|Q1GUX4|SYE1_SPHAL RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|98976397|gb|ABF52548.1| glutamyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 490

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 98/303 (32%), Gaps = 52/303 (17%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A      G +        D     +    ++  
Sbjct: 21  VVTRFAPSPTGYLHIGGARTALFNWLFAR---HHGGKFLLRIEDTDRARSTDAAIDAILD 77

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +    + D +    +        V  +L  +  +      +++             + 
Sbjct: 78  GMRWLELDWDGETVFQFARAPRHAEVAHDLLARGGAYRCYLTQDE-------------LA 124

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
            +R + +       +     D   GDP+    +              L  P+       D
Sbjct: 125 AMRAEAQEKRQPFRVRSPWRDRDDGDPAAPHVL-------------RLRAPQDGAVTIAD 171

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             + ++  ++  + D +   LL+SDG+ TY  + +       + G  ++I   G DH   
Sbjct: 172 KVQGEVTVQNAELDDFI---LLRSDGTPTYMLSVV---VDDNDMGVTHVIR--GDDHLNN 223

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             R  A+  A+  ++      +   V L       K+SKR G           +G D+ R
Sbjct: 224 AFRQLALIRAMDWREP-----VYAHVPLIHGADGTKLSKRHG----------ALGVDAYR 268

Query: 424 FMM 426
             M
Sbjct: 269 DAM 271


>gi|198283967|ref|YP_002220288.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218668001|ref|YP_002426603.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248488|gb|ACH84081.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218520214|gb|ACK80800.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 938

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 63/229 (27%), Gaps = 43/229 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYG--RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
            L   +    + +   +  E        G GT   I     N TG +H+GH     + D 
Sbjct: 4   TLDRPFAPAEIETQCYARWETHGLFQPKGSGTPYCIMLPPPNVTGTLHMGHAFQDTLMDI 63

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L  +    G     +   + AG     L                             + +
Sbjct: 64  LTRVHRMRGERTLWQPGTDHAGIATQMLVE---------------------------RQL 96

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +E  D++      F E  W    +  S   + + +R     L    D          G 
Sbjct: 97  VQEGGDRHQMGRGAFLERVWQ--WRRESGGHITRQMR----RLGASCDWSRERFTLDSGL 150

Query: 270 PSPIRDIIDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              + ++   L  +G +Y G        +L    S      + ++  L 
Sbjct: 151 SHAVTEVFVRLHDEGLIYRGKRLVNWDPVLRTAVSDLEVISEAEQGSLW 199


>gi|110677466|ref|YP_680473.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123066032|sp|Q16E06|SYL_ROSDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109453582|gb|ABG29787.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 848

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +   + +        K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  ARWQKAWRENEVFKAIRSADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKLATG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|91205272|ref|YP_537627.1| glutamyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123266233|sp|Q1RJC6|SYE2_RICBR RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|229470631|sp|A8GX08|SYE2_RICB8 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|91068816|gb|ABE04538.1| Glutamyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 464

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 97/293 (33%), Gaps = 56/293 (19%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           T   I   + +PTG +H+G  R A+                    Y+          A  
Sbjct: 2   TNNVITRFAPSPTGFLHIGSARTALF------------------NYL---------FAKH 34

Query: 181 VFWRYQQALYNNDSDL-PEGYYPGVY--LKHVGKELADK--YSSELLNFPEEKWLPIVKD 235
              ++   + + D +   E     ++  LK +G    D+  + S+  +  +E  L ++ +
Sbjct: 35  NNGKFLLRIEDTDKERSTEAAVEAIFSGLKWLGLNWDDEVVFQSKRNDLYKEAALKLLAE 94

Query: 236 YSVQAM---MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
                     + I    +        FI    +           I  + R        L 
Sbjct: 95  GKAYYCFTPQEEIEKQRQEALENKQHFIFNSKWRDKTSDTYPKDIKPVIR--------LK 146

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P S +    D  +  ++  +  +    D  LL+SDG+ TY    LA     ++ G  ++
Sbjct: 147 TPSSGSITIHDTLQGDVVIENCHID---DMVLLRSDGTATYM---LAVVVDDHDMGITHI 200

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           I   G DH     R  A+  A        +V +   + L       K+SKR G
Sbjct: 201 IR--GDDHLTNAARQIAIYNAFGY-----HVPIMTHIPLIHGADGAKLSKRHG 246


>gi|39935844|ref|NP_948120.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|39649698|emb|CAE28219.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 514

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 110/342 (32%), Gaps = 70/342 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----------------- 174
           P G  H+GH   A+  D LA      G +V      ++ G ++                 
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQTAQKEGLTPHALATR 75

Query: 175 ---------NTLALSV--FWRYQQALYN-----------NDSDLPEGYYPGVY-LKHVGK 211
                    + L +S   F R  +  ++           +  D+    Y G Y ++    
Sbjct: 76  NAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIYLDSYSGWYSVRDEAY 135

Query: 212 ELADKY---SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
              D+      ++   P+   +  V++ S    +   +D L  L      FI  D     
Sbjct: 136 YAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLYEDQPDFIGPDSRRNE 195

Query: 269 DPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
             S ++  + +L+     +  G+  P   +      +D            D+ D+     
Sbjct: 196 VISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYISGVGFPDENDK----- 250

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387
             ++ Y+ AD               ++V+G D    + R  AV        A I V    
Sbjct: 251 --NWHYWPAD---------------VHVIGKD----IIRFHAVYWPAFLMSAGIPVQKRV 289

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               +      KMSK  G+ +   ++ D+ G D VR+  L  
Sbjct: 290 YAHGFLFNKGEKMSKSVGNIVDPFNLADQYGVDQVRYFFLRE 331


>gi|84687979|ref|ZP_01015843.1| leucyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664011|gb|EAQ10511.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 848

 Score = 41.4 bits (96), Expect = 0.44,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 81/264 (30%), Gaps = 44/264 (16%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------- 152
           K  ++   +G         K     +E     P+G +H+GH R   +GD +A        
Sbjct: 12  KWQAAWDEAGTFAATRDPAKPKFYVLEMF-PYPSGRIHIGHVRNYTMGDVVARYKKSSGF 70

Query: 153 -LMAFSGYEVTR---EY-------YINDA--------GAQINTLALSVFWRYQQALYNND 193
            ++   G++      E        +  D          +Q+  +  S+ W  + A  + +
Sbjct: 71  SVLHPMGWDAFGMPAENAAMATGGHPKDWTYNNIAEMKSQMKPMGWSLDWTREFATCDPE 130

Query: 194 SDLPEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
               +      +L K +        + + ++        ++     ++  ++ R +L   
Sbjct: 131 YYGQQQALFIDFLEKDLVYRKNAVVNWDPVDMTVLANEQVIDGKGWRSGAEVERRELTQW 190

Query: 253 NIQHDIFISEDDFHRGDPSPIRDIID-----NLARQGYVYEG-----ILPPPKSKTTQKC 302
                 F    DF       I  + D      L +  ++ +                 + 
Sbjct: 191 ------FFKISDFSEELLEAIDTLKDWPEKVRLMQANWIGKSQGLRFAFERTDGGAPIEV 244

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLK 326
              R   L  ++ VG   D PL K
Sbjct: 245 YTTRPDTLMGASFVGISPDHPLAK 268


>gi|294012492|ref|YP_003545952.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292675822|dbj|BAI97340.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 936

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 60/198 (30%), Gaps = 34/198 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +     +       + R          I     N TG +H+GH         L 
Sbjct: 7   TFDPAEIESRWYAHWEEKGLF-RPERPSAEPFTIVNPPPNVTGSLHIGH--------ALD 57

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
           + +                    + +      R + AL+   +D       G+  + V +
Sbjct: 58  NTLQ-------------------DIVIRYERLRGKDALWVVGTDHA-----GIATQMVVE 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
              +    +  N+  E+++  V ++  ++   I R  L+ L    D          G   
Sbjct: 94  RQMEARQDKRTNYTREQFVEKVWEWKAESGGAITRQ-LRRLGCSMDWANERFTMDEGFSK 152

Query: 272 PIRDIIDNLARQGYVYEG 289
            +  +   L R+G +Y  
Sbjct: 153 AVIKVFVELHRRGLLYRD 170



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           GFD +++   +  +    +       V  +K  ++        L R     KMSK  G+ 
Sbjct: 553 GFD-ILFFWDARMAM---QGMEFMGDVPWRKLYLH-------GLVRAADGQKMSKSKGNV 601

Query: 408 ITLRHVVDEVGSDSVRFMM 426
           +    ++D  G+D++RF M
Sbjct: 602 VDPLGLIDRFGADALRFFM 620


>gi|261253533|ref|ZP_05946106.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936924|gb|EEX92913.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 686

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLQEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 253

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFIKAATYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D +  + +R+    + NS + D D        + N
Sbjct: 348 DHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|255659377|ref|ZP_05404786.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848463|gb|EEX68470.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 826

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 85/271 (31%), Gaps = 43/271 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             SP  +          G  Y         K     +   P+G +H+GH R   +GD +A
Sbjct: 3   RYSPQDIEAKWQKKWEEGKVYKTEADPDRPKYYALEMFPYPSGNLHMGHVRNYAIGDVMA 62

Query: 152 S--------LMAFSGYEVTREY----------------YIN--DAGAQINTLALSVFWRY 185
                    ++   G++                     Y N  +   Q   L LS  W  
Sbjct: 63  RYKTMEGFNVLHPMGFDSFGMPAENAAIKHGVKPADWTYSNIENMEKQQKKLGLSYDWDR 122

Query: 186 QQALYNNDS-----DLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +    +         L E +Y     Y K       D   + L N        ++     
Sbjct: 123 EVKTCDPSYYKWTQWLFELFYKRGLAYKKKASVNWCDTCGTVLANE------QVIDGKCW 176

Query: 239 QAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
           +   ++ + DL    ++     D+ + + D  +G P  ++ + DN   +    E  L  P
Sbjct: 177 RCDHEVHKKDLSQWFLKITDYADVLLKDLDKLKGWPERVKTMQDNWIGRSEGLEFNLEAP 236

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  TT      R   ++  T +    + PL+
Sbjct: 237 ELGTTIAAYTTRPDTVYGITFLALAAEHPLV 267


>gi|159904700|ref|YP_001548362.1| valyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886193|gb|ABX01130.1| valyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 886

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   +     +   +      K     I+     PTG MH+GH       D +A     +
Sbjct: 11  LENKVQEKWENEKTFKFLEDDKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+                    V +      +   +++       +    + +    ++
Sbjct: 71  GYD--------------------VLFPQGWDCHGLPTEVKVEELNNITKSDIDRH---EF 107

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
               +   +E              ++ +R  +K+L I  D    + ++   +P  +R   
Sbjct: 108 RRLCVELTDEN-------------VEKMRGQVKSLGISID---WDREYITMNPDYVRKSQ 151

Query: 276 -IIDNLARQGYVYEGILP 292
                +  +G +Y G  P
Sbjct: 152 TAFLKMYEKGLIYRGKHP 169


>gi|56477924|ref|YP_159513.1| leucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821074|sp|Q5P252|SYL_AZOSE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56313967|emb|CAI08612.1| leucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 873

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +         S   +         K     +   P+G +H+GH R   +GD LA  
Sbjct: 6   TPAAVEATAQQHWESTQAFKVAEDAGKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARY 65

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 66  HRMRGFNV 73


>gi|33593207|ref|NP_880851.1| valyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81424893|sp|Q7VWK6|SYV_BORPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33563582|emb|CAE42481.1| valyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382618|gb|AEE67465.1| valyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 960

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 40/195 (20%)

Query: 100 KILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +        G       +  G       I+F   N TG +H+GH     + D L      
Sbjct: 28  RWYDEWAKRGYFDAGRHVETGTDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRM 87

Query: 157 SGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            G +       + AG   QI                                  V +   
Sbjct: 88  LGDDTVFVPGTDHAGIATQI----------------------------------VVERQL 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D       +   EK++  V ++  Q+    I   ++ L    D               + 
Sbjct: 114 DAQKVSRHDLGREKFVEKVWEWKEQSG-STITGQVRRLGASADWPREYFTMDARMSRGVA 172

Query: 275 DIIDNLARQGYVYEG 289
           +    L +QG +Y G
Sbjct: 173 ETFVRLYQQGLIYRG 187


>gi|110635538|ref|YP_675746.1| leucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|122965612|sp|Q11DE4|SYL_MESSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110286522|gb|ABG64581.1| leucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 871

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   +   + +   +N  G+ T   +E     P+G +H+GH R   +GD +A      GY
Sbjct: 14  RWQKAWEEARLFETKNDDGRPTYYVLEMF-PYPSGRIHIGHTRNYTMGDVVARYKRAKGY 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|319942635|ref|ZP_08016943.1| valyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319803814|gb|EFW00746.1| valyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 946

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 72/238 (30%), Gaps = 21/238 (8%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +   SG         K    +I+    N TG +H+GH     V DTL      +G
Sbjct: 20  ARWYPAWEKSGCFKAGLDPKKPA-FSIQLPPPNITGILHMGHAFNQTVMDTLTRYHRMAG 78

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           Y        + AG   QI      V  R  +    +  D+               E    
Sbjct: 79  YNTMWLPGTDHAGIATQI------VVERKLEKEGISRRDM-----KREDFIAKIWEWQKF 127

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMM----KIIRDDLKALNIQHDIFISED--DFHRGDP 270
               +L         +  D     M     K++ +    L  +  I+  +   ++     
Sbjct: 128 SGGTILEQMRRMGDSVDWDRLYFTMNPKLSKVVIETFVKLYEEGLIYRGKRLVNWDPKLQ 187

Query: 271 SPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327
           S + D+ +++    G+++E   P             R + LF    V    +    KS
Sbjct: 188 SAVSDLEVESEEADGHLWEIRYPGADGSEGVIVATTRPETLFGDQAVAVHPEDERYKS 245


>gi|325105536|ref|YP_004275190.1| glutamyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974384|gb|ADY53368.1| glutamyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 503

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 101/288 (35%), Gaps = 29/288 (10%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-GAQINTLAL 179
            KV + F + +PTG +H+G  R  +     A     +G  V R   I D    +    A 
Sbjct: 3   KKVRVRF-APSPTGGLHIGGVRTILFNYIFAK--KNNGEFVLR---IEDTDQTRYVPGAE 56

Query: 180 SVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                  +    N  + P  G     Y +   K +  KY+ EL+             +  
Sbjct: 57  EYIINCLKWCGLNPGEGPNVGGEYAPYRQSERKPIYKKYADELIKNG-----YAYYAFDT 111

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              ++  R+ ++    ++D   S     R   +     ++ L  QG  Y   +  P+ + 
Sbjct: 112 PEELENARNTIENF--RYD--KSTRMTLRNSLTLSAVEVEQLLTQGVPYVVRIKVPEDQN 167

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMG 357
               D+ R  + F S  V    D+ LLK+DG  TY  A +   +  K    F       G
Sbjct: 168 IHFVDLIRGHVSFDSNEVD---DKVLLKADGMPTYHLAVVVDDYLMKITHAFR------G 218

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            +          +   +  +K         L+ L  DG   K+SKR G
Sbjct: 219 EEWLPSSPIHILLWKYLGWEKDMPEWAHLPLI-LKPDG-HGKLSKRDG 264


>gi|304314921|ref|YP_003850068.1| valyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588380|gb|ADL58755.1| valyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 876

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 46/216 (21%)

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A++ +K    +++  +V    DG   KMSK  G+ I    V+++ G+D++R       
Sbjct: 503 CMALTGEKPFSEIVINGMV-FGEDG--HKMSKSRGNVIAPEEVLEDYGADALRLWAAGSV 559

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
               + F +  VK            Y Y       R+  + F  +   L       +E+E
Sbjct: 560 PGSDVPFAWKDVK------------YGY----KFLRKFWNAFRFISIHLGD----DREAE 599

Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV--------FHGHWSHGREN 542
           F   +  ++  L    R +  +             Y+ A+         +H       E 
Sbjct: 600 FRPLDRWILSRLMNLVRDVTESLEE----------YNFAAAVGRIQKFVWHDFCDEYIEA 649

Query: 543 PRLRFVQANNRKLTMMRLQLVHAV-ASIINSGLNII 577
            + R     +    +            ++ + L ++
Sbjct: 650 VKYRLYSEGDGASRVA----AQTTLRMVLETCLRLL 681


>gi|260431038|ref|ZP_05785009.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414866|gb|EEX08125.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 1053

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV  +     V L +LV   RD    KMSK  G+ I    +VDE G+D++
Sbjct: 661 WVARMMMMQLAVVNEIPFHTVYLHQLV---RDEKGKKMSKTTGNVIDPLEIVDEFGADAL 717

Query: 423 RF 424
           RF
Sbjct: 718 RF 719



 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 64/227 (28%), Gaps = 45/227 (19%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +I  +   +G         +     I     N TG +HVGH     + D L   
Sbjct: 9   AAEAEARIYKAWEQAGAFKAGANKSRDESFCIMIPPPNVTGALHVGHAFNNTLQDILIRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG                                     V K+L
Sbjct: 69  HRMRGFDTLWQPGQDHAGIATQM-------------------------------QVEKKL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-------- 265
             +   +  ++  E++L  V ++  +    II + LK L    D   +            
Sbjct: 98  MAEEGKKRTDYTREEFLAKVWEWKGEYGGTII-EQLKRLGSSCDWSRNAFTMAGAAGDPR 156

Query: 266 --HRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             H   P     +  +  ++  +G +Y G          +    D +
Sbjct: 157 TGHENSPNFHDAVIKVFVDMYDKGLIYRGKRLVNWDPHFETAISDLE 203


>gi|255348815|ref|ZP_05380822.1| glutamyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503355|ref|ZP_05381745.1| glutamyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507033|ref|ZP_05382672.1| glutamyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525490|emb|CBJ14967.1| glutamyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435043|gb|ADH17221.1| glutamyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438763|gb|ADH20916.1| glutamyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 506

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 28/277 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           V+ +PTG  HVG    A+  +  A    ++G  + R    +   ++ +  A         
Sbjct: 10  VAPSPTGDPHVGTAYMALFNEVFAR--KYNGQMILRIEDTDQTRSRDDYEANIFSALKWC 67

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +  ++     G Y G Y +    E+  KY+  LL                         
Sbjct: 68  GIRWDEGPDVGGAY-GPYRQSERTEIYKKYAEILLQTD------------CAYKCFATPQ 114

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L+ +            + R       + +     QG  Y   L  P +  +   D  + 
Sbjct: 115 ELQEMRAVASTLGYRGGYDRRYRYLSPEEVRQREEQGQPYTIRLKVPLTGESVFEDQCKG 174

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +++F      D  D+ L+KSDG  TY  A++      +  G  +++   G +      + 
Sbjct: 175 RVVFP---WADVDDQVLVKSDGFPTYHFANV---VDDHLMGITHVLR--GEEWLSSTPKH 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +  A   +  Q        + L  DG   K+SKR 
Sbjct: 227 LLLYEAFGWEPPQF---FHMPLLLNPDG--SKLSKRK 258


>gi|167742859|ref|ZP_02415633.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 470 RSLHPRSARLVEAVAARVERGGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 529

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++ G+  Y A                 +Y+ G+D   G+         A   + 
Sbjct: 530 VYRDAARA-GTGGYPAD----------------LYLEGADQHRGWFGASLMTGCAADGRA 572

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 573 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 629

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 630 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 677

Query: 499 IV 500
             
Sbjct: 678 AR 679


>gi|160897659|ref|YP_001563241.1| valyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160363243|gb|ABX34856.1| valyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 970

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 85/283 (30%), Gaps = 33/283 (11%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +G+             +++    N TG +H+GH     + D+L       G+       
Sbjct: 37  AAGVRGTGQADASQPSFSVQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGHNTVWVPG 96

Query: 167 INDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSELLN 223
            + AG   QI  +   +  +   + ++  +  PE     V  +     +  +  + ++  
Sbjct: 97  TDHAGIATQI-VVERQLQEQGIASRHDMGATPPEARKNFVSKVWEWKNQSGNTITGQMRR 155

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI----IDN 279
             +              +  I+ +    L  Q  I+         DP  +  +    ++N
Sbjct: 156 MGDSVDWSREYFTMDDKLSSIVNETFVRLYQQGLIYRG-KRLVNWDPKLMSAVSDLEVEN 214

Query: 280 LARQGYVYEGILPPPKSKTTQKC------------------DMDRKQLLFRSTMVGDDVD 321
             + G ++    P                            + +R Q L   T++   V 
Sbjct: 215 EEKDGSLWHIAYPLADGSGQLVVATTRPETMLGDAALMVHPEDERYQALIGKTVILPLVG 274

Query: 322 R--PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           R  P++  D    Y   +      K     DN  Y +G  H  
Sbjct: 275 REIPIIADD----YVDREFGTGVVKVTPAHDNNDYAVGQRHGL 313


>gi|219670052|ref|YP_002460487.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782390|sp|B8FT35|SYI_DESHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219540312|gb|ACL22051.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 922

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 17/168 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + + A   K     VL    +    D    KMSK  G+ +   
Sbjct: 550 LYMEGSDQHRGWFNSSLSTSVAAYGKAPYKAVLTHGFLV---DEKGRKMSKSLGNGVDPL 606

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V  E+G+D +R  +        +      +K+ S+         AY + R+  R     
Sbjct: 607 QVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSE---------AYRKIRNTLRFLLSN 657

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             D D     ++ +  +   +     L+  L +  + +       E +
Sbjct: 658 LNDFD---PAKDRVAYKDLPEIDRWALLQ-LGKVTQRVLQGYEKYEFH 701


>gi|33597415|ref|NP_885058.1| valyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81426706|sp|Q7W6P3|SYV_BORPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33573842|emb|CAE38151.1| valyl-tRNA synthetase [Bordetella parapertussis]
          Length = 960

 Score = 41.4 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 40/195 (20%)

Query: 100 KILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           +        G       +  G       I+F   N TG +H+GH     + D L      
Sbjct: 28  RWYDEWAKRGYFDAGRHVETGTDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRM 87

Query: 157 SGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            G +       + AG   QI                                  V +   
Sbjct: 88  LGDDTVFVPGTDHAGIATQI----------------------------------VVERQL 113

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D       +   EK++  V ++  Q+    I   ++ L    D               + 
Sbjct: 114 DAQKVSRHDLGREKFVEKVWEWKEQSG-STITGQVRRLGASADWPREYFTMDARMSRGVA 172

Query: 275 DIIDNLARQGYVYEG 289
           +    L +QG +Y G
Sbjct: 173 ETFVRLYQQGLIYRG 187


>gi|296876924|ref|ZP_06900969.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432055|gb|EFH17857.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 663

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 108/334 (32%), Gaps = 47/334 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------- 178
           P+G +H+G     +  D LA       Y+V     +++ G +I   A             
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDG 73

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDY 236
           ++V  +    L +   D         + K V +      + + +   E      V  +++
Sbjct: 74  MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYV--- 286
             ++ +  +  D     I           ++SE+ +          +++    Q      
Sbjct: 134 FTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 193

Query: 287 ---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y + 
Sbjct: 194 DGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYVTA-LGYGQD 252

Query: 344 KYERGFDNMIY-----VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            +E  FD         ++G D    HS Y      +   +  K  +  +     V   +D
Sbjct: 253 DHE-NFDKFWNGTVFHMVGKDILRFHSIY---WPILLMMLDIKLPERLIAHGWFVM--KD 306

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           G   KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 307 G---KMSKSKGNVIYPEMLVERFGLDPLRYYLMR 337


>gi|168488458|ref|ZP_02712657.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183573094|gb|EDT93622.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332073087|gb|EGI83566.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 665

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 113/350 (32%), Gaps = 77/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A             
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAEEA---------- 64

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P VY+  +   + + +  +LL+   +K++    DY  + + ++    L  
Sbjct: 65  -------GITPQVYVDRMAVGVKELW--QLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 115

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 116 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--EAGNVTGGIAPS----GHEVEWVSEES 169

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 170 YFLRLSKYQDCLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSN 229

Query: 349 FDNMIYVM-------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV                D  G   +     V   V +   + + +   ++ +  
Sbjct: 230 PKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 289

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           D                  KMSK  G+ +    +V+  G D +R+ ++  
Sbjct: 290 DVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRN 339


>gi|70607182|ref|YP_256052.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|90108444|sp|Q4J8X1|SYV_SULAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68567830|gb|AAY80759.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 831

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 9/72 (12%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N++++  +            +   R+   K     I+      +G +H+GH     + DT
Sbjct: 46  NIWMTKEFW---------EKVFRFRDEDEKSPVFVIDTPPPFTSGELHMGHAYWVTISDT 96

Query: 150 LASLMAFSGYEV 161
           +       GY V
Sbjct: 97  IGRFKRLEGYNV 108



 Score = 37.2 bits (85), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              +L     L  DG   +MSK  G+ ++    VDE G+D++R  +L  K  +   F + 
Sbjct: 548 FKEVLINGQVLGPDGT--RMSKSKGNVVSPLDKVDEYGADAIRLTLLDAKIGDDFPFKWD 605

Query: 441 KV 442
            V
Sbjct: 606 TV 607


>gi|325916542|ref|ZP_08178808.1| glutamyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537215|gb|EGD08945.1| glutamyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 467

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 97/296 (32%), Gaps = 63/296 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  RE        Q    A+
Sbjct: 8   APSPTGYLHIGGARTALYCWLEARHRGGQFVLRI-----EDTDRE-----RSTQAAIDAI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +       L  ++  + +      Y + V ++L  +       +   + L  +++ ++ 
Sbjct: 58  -LEAMDWLGLGYDEGPIYQTQRVARY-QEVAEQLLAQ-GKAYYAYETREELDAMREAAMA 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              K           +++    E    +R DP+ +                    P   T
Sbjct: 115 KQEK----------PRYNGAAREQQLPYRDDPNRV---------------IRFKNPVGGT 149

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ + ++   ++ +    D  + + DG  TY   + A     ++ G   +I   G 
Sbjct: 150 VVFDDLIKGRIEIANSELD---DMVIFRPDGFPTY---NFAVVVDDWDMGITEVIR--GD 201

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
           DH     R   +  A+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 202 DHINNTPRQINIYEALGAPVPKFAHM-----PMILDEQGAKLSKRTGAADVMQYKD 252


>gi|297537354|ref|YP_003673123.1| valyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297256701|gb|ADI28546.1| valyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 944

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 70/271 (25%), Gaps = 45/271 (16%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             P  +         S   Y   L  +      I     N TG +H+GH     + D L 
Sbjct: 17  FDPKTIESKWYEFWESKGYYAAGLNPEVKDNFCILLPPPNVTGTLHMGHGFNQTLMDALT 76

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G     +   + AG   QI                                  V
Sbjct: 77  RYHRMKGDNTLWQPGTDHAGIATQI----------------------------------V 102

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +   D       +   EK+L  V ++   +   I +  ++ L    D          G 
Sbjct: 103 VERQLDAQGVSRHDLGREKFLEKVWEWKEYSGGTITKQ-MRRLGTSPDWSRERFTMDEGL 161

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + +    L  +G +Y G               D + +          ++ PL    G
Sbjct: 162 NKTVTETFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQEEEDGFMWHINYPLADGSG 221

Query: 330 SYTYFAA-------DLAYFKCKYERGFDNMI 353
           + T           D+A      +  + ++I
Sbjct: 222 NLTVATTRPETMLGDVAVMVHPEDERYAHLI 252


>gi|260772261|ref|ZP_05881177.1| glutamyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611400|gb|EEX36603.1| glutamyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 474

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 96/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y          ++ ++         E K       Y+ + ++  IR +
Sbjct: 61  MTWLGLDWDEGPYYQTKRFDRYNQVVEQL------LAENKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKAVNEAAKEGDPCVIRFRNPKEGSVIFDDKIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DGS TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGSPTY---NFCVVVDDVDMGITHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYQAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|258597035|ref|XP_001347434.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|254922413|gb|AAN35347.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 677

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 132/394 (33%), Gaps = 62/394 (15%)

Query: 137 HVGHCRCAVVGDTLASLM-AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           H+GH R  V  D +  ++  +  Y+V     I D   +I   ++     + +     + +
Sbjct: 142 HLGHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSVEEKIGFTELARKWEYE 201

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
             E       L         +Y  +++ + E+         S +  +    D+ K     
Sbjct: 202 FWEDMKSLNVLLPTAITRVSEYVGDIVKYIEKIIENKYAYVSEEGSVYFDIDEFKK---- 257

Query: 256 HDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
                SE  F+ R +P  ++D    L  +G +  G++   K             L   S 
Sbjct: 258 -----SEKHFYARMEPLSVKDENKILEGEGDL--GVISKKKKNAYDF------ALWKSSK 304

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG-------YVKRL 367
                 D P  K    +    + +A          + +  V+   HSG       +    
Sbjct: 305 PNEPHWDSPWGKGRPGWHIECSTMAS---------NILGDVLDI-HSGGIDLRFPHHDNE 354

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
            A + A  +    +N  L     L+ +G  +KMSK   +FIT+++++ +  S+ +R + L
Sbjct: 355 LAQSEAFFDHSQWVNYFLHSG-HLHIEG--LKMSKSLKNFITIKNMLTKYTSNQIRILFL 411

Query: 428 WRKNSELLDFD-----------------------FCKVKEQSKENPVFYVQYAYARCRSI 464
             K    +++                          K+K     +   Y   A  +   +
Sbjct: 412 LNKWDNFMNYSPNGESMVQCIEIDKSFTNFFAIILMKIKNFDLNSCNLYWSDADNKLNLL 471

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           FRQ K+   +   D F         +   +E+ +
Sbjct: 472 FRQTKNKIHEHFLDNFNTPDALLAIQKLITEINI 505


>gi|190891834|ref|YP_001978376.1| methionyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190697113|gb|ACE91198.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 97/325 (29%), Gaps = 35/325 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q     
Sbjct: 16  PNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGITAQALADR 75

Query: 192 NDSDLPEGYYP----GVYLKHVGKELADKYSSELLNFPEEKWLPIVKD-------YSVQA 240
           N  +                   +E   + S  + N   E    I KD          +A
Sbjct: 76  NSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENG-DIYKDSYAGWYSVRDEA 134

Query: 241 MMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
             +    +L+A  +++        ++ E  +          ++ +               
Sbjct: 135 YYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHYEANPDFIGPAERRN 194

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
            +        +   + R    +   +  D      +  D    Y  A   Y + +     
Sbjct: 195 EVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYITA-TGYIEDRNGPRA 253

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                D  ++++G D    + R  AV        A++ +        +      KMSK  
Sbjct: 254 KYWPAD--VHIIGKD----IIRFHAVYWPAFLMAAKLPLPKRVFAHGFLLNKGEKMSKSL 307

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +   ++V+  G D VR+  L  
Sbjct: 308 GNVVDPVNLVNHFGLDQVRYFFLRE 332


>gi|108705809|gb|ABF93604.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 933

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 10/161 (6%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV--SANPTGPMHVGHCRCAVVGDT 149
           +L+    ++   + V   I +GR+           +V    N TG +H+GH     + D 
Sbjct: 67  FLASQMAKQYSPAAVEKSIFWGRSCGSYFEVCTRYYVLPPPNVTGALHIGHALTVAIEDA 126

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +      SGY       ++ AG     +      R ++       D+         LK  
Sbjct: 127 IIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMREKKLTR---HDIGREELVSEVLK-- 181

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
                D+Y   +LN        +     V  +       LK
Sbjct: 182 ---WKDEYGGTILNQLRRLGASLDWSREVDYLDIKEETMLK 219


>gi|319940295|ref|ZP_08014647.1| glutamyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810597|gb|EFW06933.1| glutamyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 485

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA-QINTLA 178
           + +PTG +H+G+ R A+          G  +  +      +  R+ ++ D    Q+  L 
Sbjct: 10  APSPTGLLHIGNARTALFNYLYARHYGGTFIIRI-----EDTDRKRHVEDGERSQLENL- 63

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
                R+    ++   +  E Y     L     ++   Y +ELL         +     V
Sbjct: 64  -----RWLGIDWDESPETHEKYRQSERL-----DIYQSYINELLEKG------LAYKSYV 107

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                    + +    +   +I+E  +           I +    G V    L   +S  
Sbjct: 108 TEEELAAERERQEAAGETPRYINE--YLGMSEDEKAAYIADREAAGIVPTVRLVVNESGI 165

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D+ + ++ F    +G   D  + K DG  TY   + A     +     ++I   G 
Sbjct: 166 YKWNDLVKGEIEFEGGNIG--GDWVIQKKDGYPTY---NFAVVVDDHLMKISHVIR--GD 218

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           DH     +   V  A+  +  Q       +  +       K+SKR  + +    
Sbjct: 219 DHIANTPKQLMVYEALGWEAPQFGH----MTLIINSETGKKLSKRDTNTLQFIE 268


>gi|307354269|ref|YP_003895320.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157502|gb|ADN36882.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 1054

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+       +    ++     V++        D    KMSK  G+ +T   +++
Sbjct: 551 GQDQTRGWFYSQLGASTIAFDRAPYKKVMMHGF---SLDSDGRKMSKSLGNVVTPEEIIE 607

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            VG D +R  +L      + L F++  VK
Sbjct: 608 RVGVDVLRMYILSASAPWDDLKFNWEGVK 636


>gi|218514802|ref|ZP_03511642.1| valyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 283

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-- 448
           L RD    KMSK  G+ I    ++DE G+D++R             F    +  Q ++  
Sbjct: 108 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIMAAQGRDVK 154

Query: 449 -NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +P     Y   R           F +++      + +P+ +E   +   ++  LA   R
Sbjct: 155 LDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTELARTER 210

Query: 508 VIENATIAQ 516
            +  A  A 
Sbjct: 211 DVTEALEAF 219


>gi|219850836|ref|YP_002465268.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545095|gb|ACL15545.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 1060

 Score = 41.4 bits (96), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 9/101 (8%)

Query: 349 FDNM----IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           FD +    + + G D   G+       +    +K     VL+        D    KMSK 
Sbjct: 540 FDRLWPADLIIEGQDQTRGWFYSQLGASTCAFDKAPYKRVLMHGF---ALDADSKKMSKS 596

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            G+ IT   VV + G D +RF +L      + L F++  VK
Sbjct: 597 LGNMITPEEVVAKYGVDVLRFYVLSANAPWDDLKFNWDGVK 637


>gi|326389159|ref|ZP_08210739.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206390|gb|EGD57227.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 840

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 14/124 (11%)

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G  IKMSK   + +    +V   G+D++R+ ML     E    D     E   E    +V
Sbjct: 613 GRVIKMSKSKKNVVDPDEIVARYGADAIRWFMLSDSPPER---DLPW-SEAGIEGCARFV 668

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL-----IVHLAEYPRVI 509
           Q    R   +F Q        D  +  +      +     E  L     +  + E   VI
Sbjct: 669 Q----RLWRLFAQYDATATGEDKAVARKAHQTVHAVAADIE-ALGFNKAVARIYELTGVI 723

Query: 510 ENAT 513
           E A 
Sbjct: 724 EKAA 727



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+               +  +      +  +  +   P+G +H+GH R   +GD LA
Sbjct: 5   RFDPATSDIRWQKAWDDAQTFRADDASPRPRSYVLEMFPYPSGRIHIGHVRNYTMGDVLA 64

Query: 152 SLMAFSGYEV 161
                 G+EV
Sbjct: 65  RYKRMKGFEV 74


>gi|302339641|ref|YP_003804847.1| glutamyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636826|gb|ADK82253.1| glutamyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 489

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 52/296 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG  H+G  R A+     A       ++     +  RE Y       +  L  ++ 
Sbjct: 8   APSPTGLQHIGGIRTALFNYFFARSSGGSFILRIE--DTDRERY---HDEALEDLFETLR 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     +    +G   G Y++    +L  +Y+ +L+      +        ++ + 
Sbjct: 63  WLGIEWDEGPE----KGGDYGPYIQSERHDLYQEYTKKLIESG-HAYYCFCSSERLETLR 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           +  +   KA  + +D              P+ +    +A   +       P + KT+   
Sbjct: 118 QEQQKS-KASRVGYDGHCR--------SIPLEEAKQRIAAGEHPVVRFKVPSEGKTSF-- 166

Query: 303 DMDRKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD- 359
                 LL + T    D+  D  +LKSDG  TY  A++       +     + +++ +  
Sbjct: 167 ---DDVLLGKVTRKNRDIPPDPVILKSDGFPTYHLANV------VDDHLMKITHILRAQE 217

Query: 360 ----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                + +V     +  A   +     V     + + +DG   K+SKR G      
Sbjct: 218 WIPSGALHV----LLYRAFGWEPP---VYCHLPMVMGKDGQ--KLSKRHGATAVRE 264


>gi|262276430|ref|ZP_06054239.1| glutamyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220238|gb|EEY71554.1| glutamyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 473

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A     +G E      I D    +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLCA---KHAGGEFVLR--IED--TDLERSTQEAIDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y          E+ D+  +E             K Y+ + ++  IR++
Sbjct: 61  MEWLGLDWDEGPYYQTKRFDRYNEVIDQLLAEG---------KAYKCYAPKELLDEIREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++           R D +  + +  N A        +      + +   +   + 
Sbjct: 112 QMAAGVKP----------RYDATHPKVMAANEAATEDSPFCVRFRNPKEGSVVFEDKIRG 161

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  +    D  D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 162 RIEIANSELD--DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +     C ++ L  DG   K+SKR G  
Sbjct: 215 NIYKAIGAPVPEFAH--CSMI-LGDDGA--KLSKRHGAV 248


>gi|260772448|ref|ZP_05881364.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611587|gb|EEX36790.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 658

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 80/280 (28%), Gaps = 46/280 (16%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  +   +Q  +     Y G   P ++      
Sbjct: 169 DLPQFESMLKEWTRSGSLQTETANKMQEWFEGGLQQWDISRDAPYFGFEIPGETNKFFYV 228

Query: 303 DMD---RKQLLFR---STMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D        F+   S     D D    K   +  Y +   D+ YF             
Sbjct: 229 WLDAPIGYMGSFKNLCSKRNDLDFDEYWRKDSQTELYHFIGKDIVYF------------- 275

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G F+     +
Sbjct: 276 -----HSLF---WPAMLEGSGFRKPT-NVFVHGYVTV----NGAKMSKSKGTFVKASTYL 322

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             +  + +R+    + N+ + D D        + N     +          R A  I   
Sbjct: 323 KHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVNADVVNK----IVNLASRNAGFISKR 378

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLA---EYPRVIEN 511
            D  L      P+      +  + I  L    E+ R I  
Sbjct: 379 FDNQLSATFAEPELYAEFAAAAERIAELYETREFGRAIRE 418


>gi|298346576|ref|YP_003719263.1| valine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236637|gb|ADI67769.1| valine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 885

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 18/124 (14%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++  SD+VR+     +      FD  ++K   +      
Sbjct: 593 DPDHKKMSKSKGNVVTPMALLEKHSSDAVRYWAASARLGTDAAFDEGEMKVGRRL----- 647

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 +  +  + A  +  D D  L P  V  +          LI  LA    VI +AT
Sbjct: 648 ----AIKLLNASKFALSMGGDADLVLDPALVTVEVD------RSLIAILA---EVITSAT 694

Query: 514 IAQE 517
            A E
Sbjct: 695 KAFE 698


>gi|183600427|ref|ZP_02961920.1| hypothetical protein PROSTU_03998 [Providencia stuartii ATCC 25827]
 gi|188020223|gb|EDU58263.1| hypothetical protein PROSTU_03998 [Providencia stuartii ATCC 25827]
          Length = 964

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/216 (10%), Positives = 59/216 (27%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ + +   +       +  N         +     N TG +H+GH     + DT+ 
Sbjct: 17  TYNPAEIEQARYAHWEKSGYFKPNGDTSKESFCVVIPPPNVTGSLHMGHAFQQTIMDTMI 76

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 77  RYQRMQGKNTLWQTGTDHAGIATQMV-------------------------------VER 105

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           ++A + +    ++  + ++  +  +  ++    I   ++ L    D          G   
Sbjct: 106 KIAAEENKTRHDYGRDAFIDKIWQWKAESG-GTISQQMRRLGDSVDWERERFTMDEGLSK 164

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +++    L +   +Y G               D +
Sbjct: 165 AVKEAFVRLYKDNLIYRGKRLVNWDPKLHTAISDLE 200


>gi|99034770|ref|ZP_01314694.1| hypothetical protein Wendoof_01000481 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 808

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 35/187 (18%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV---------------------------T 162
             P+G +H+GH R   +GD +A     +G+EV                           T
Sbjct: 6   PYPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAARDNNISPETWT 65

Query: 163 REYYINDAGAQINTLALSVFWR------YQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
           +E  I++   Q+ ++ LS  W             +      +    G+  +       D 
Sbjct: 66  KEN-IDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAYRKESWVNWDP 124

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
               +L   +       +  +V    K+ +  LK  +   D+        +  P  ++ +
Sbjct: 125 VDQTVLANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSL-KNWPEKVKTM 183

Query: 277 IDNLARQ 283
            +    +
Sbjct: 184 QERWIGK 190


>gi|89895628|ref|YP_519115.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|123091718|sp|Q24TH1|SYI_DESHY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89335076|dbj|BAE84671.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 922

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 17/168 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+     + + A   K     VL    +    D    KMSK  G+ +   
Sbjct: 550 LYMEGSDQHRGWFNSSLSTSVAAYGKAPYKAVLTHGFLV---DEKGRKMSKSLGNGVDPL 606

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V  E+G+D +R  +        +      +K+ S+         AY + R+  R     
Sbjct: 607 QVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSE---------AYRKIRNTLRFLLSN 657

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
             D D     ++ +  +   +     L+  L +  + +       E +
Sbjct: 658 LNDFD---PAKDRVAYKDLPEIDRWALLQ-LGKVTQRVLQGYEKYEFH 701


>gi|260592110|ref|ZP_05857568.1| isoleucine--tRNA ligase [Prevotella veroralis F0319]
 gi|260535988|gb|EEX18605.1| isoleucine--tRNA ligase [Prevotella veroralis F0319]
          Length = 1221

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 69/306 (22%), Positives = 108/306 (35%), Gaps = 53/306 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +++   E     V   +   E A        N  +
Sbjct: 576 LNDW-----NLSRSRFWGTPLPIWRDEN-HGEKCIGSVEELYNEIEKAVAAGVMEKNPLK 629

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDN----L 280
           E    +V DYS +   KI   DL    +   + ++++    HR +   I    D+     
Sbjct: 630 EAGF-VVGDYSKENYDKI---DLHRPYVDDIVLVNDEGKPMHR-ESDLIDVWFDSGSMPY 684

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+  Y +EG +     K T   +   +  L  ST  G  V      +D            
Sbjct: 685 AQLHYPFEGEINSDGLKATGMSEAAYRDALIHSTYEGIAVPPAFFPAD------------ 732

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                       I   G D   G+   L A+A  V +  A  NV+   LV    D    K
Sbjct: 733 -----------FINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNK 777

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPV 451
           MSK  G+      ++ + G+D VRF M+      + L FD   V E  ++          
Sbjct: 778 MSKHVGNVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDECRRKFFGTLYNTYS 837

Query: 452 FYVQYA 457
           F+  YA
Sbjct: 838 FFALYA 843


>gi|254504424|ref|ZP_05116575.1| isoleucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222440495|gb|EEE47174.1| isoleucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 986

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH     + D +   M   GY+     Y+         +   +  +Y+   
Sbjct: 63  PYANGNIHIGHALNKTLKDIVTRSMQMMGYDS---NYVPGWDCHGLPIEWKIEEQYRAKG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P                              ++    +D++    + + R++ 
Sbjct: 120 KNKD-EVPIN----------------------------EFRKECRDFA-DHWIGVQREEF 149

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           K L I+ D             + I   +   A  G +Y G  P   S
Sbjct: 150 KRLGIEGDWDNPYLTMRFESEAVIAQELMKFALSGQLYRGSKPVMWS 196


>gi|218709003|ref|YP_002416624.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782875|sp|B7VLW8|SYM_VIBSL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218322022|emb|CAV18060.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 686

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQNETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGAGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFIKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  + +R+    + NS + D D        + N
Sbjct: 348 NHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|254167151|ref|ZP_04874004.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624007|gb|EDY36569.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 939

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 63/202 (31%), Gaps = 25/202 (12%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              +          +     +    K  I       +G +H+GH R   +GD +A     
Sbjct: 4   AAIERKWQRKWQNDKIFEPKVENKKKFFITVPYPYMSGSLHIGHGRTFTMGDIIARFKRL 63

Query: 157 SGYEVT--REYY--------INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            GY V     ++        I DA    +   ++++  Y +   ++++ + E     V  
Sbjct: 64  QGYNVLFPMAFHVTGTPVLAIADAIKAGDEKVINLYKEYVRIYEDDENRVEEIVKSFVNP 123

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN------------- 253
           +++ +  A+K   + +              +     K +    K L              
Sbjct: 124 ENIARYFAEKTQQDFIGMGYSIDWRRKFHTAEPIYNKFVEWQFKKLYDKGVIKKGKYPIT 183

Query: 254 --IQHDIFISEDDFHRGDPSPI 273
             I     + EDD   GD + +
Sbjct: 184 YSIDDGNPVGEDDIEDGDTNKV 205


>gi|85704104|ref|ZP_01035207.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671424|gb|EAQ26282.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 889

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  S+   + +   R    +     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQSAWDAAEVFRARRDETRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYKIATG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|69245495|ref|ZP_00603459.1| Glutamyl-tRNA synthetase bacterial/mitochondrial [Enterococcus
           faecium DO]
 gi|257879801|ref|ZP_05659454.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882527|ref|ZP_05662180.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891642|ref|ZP_05671295.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894119|ref|ZP_05673772.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614227|ref|ZP_05711997.1| glutamyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559475|ref|ZP_05831656.1| glutamyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206626|ref|ZP_05921324.1| glutamyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289564987|ref|ZP_06445441.1| glutamyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293564122|ref|ZP_06678528.1| glutamyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570058|ref|ZP_06681138.1| glutamyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614956|ref|ZP_06694847.1| glutamyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294618276|ref|ZP_06697858.1| glutamyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294623058|ref|ZP_06701945.1| glutamyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940065|ref|ZP_07847248.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942528|ref|ZP_07849367.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949366|ref|ZP_07852707.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952826|ref|ZP_07855798.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993741|ref|ZP_07859086.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314994806|ref|ZP_07859938.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195746|gb|EAN10183.1| Glutamyl-tRNA synthetase bacterial/mitochondrial [Enterococcus
           faecium DO]
 gi|257814029|gb|EEV42787.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818185|gb|EEV45513.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257828002|gb|EEV54628.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830498|gb|EEV57105.1| glutamyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074574|gb|EEW62895.1| glutamyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079119|gb|EEW66812.1| glutamyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163194|gb|EFD11040.1| glutamyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587430|gb|EFF19314.1| glutamyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592242|gb|EFF23860.1| glutamyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291595492|gb|EFF26803.1| glutamyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291597531|gb|EFF28695.1| glutamyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604040|gb|EFF33568.1| glutamyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590990|gb|EFR69835.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591841|gb|EFR70686.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595060|gb|EFR73905.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598749|gb|EFR77594.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640665|gb|EFS05245.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644197|gb|EFS08777.1| glutamyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 486

 Score = 41.4 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 90/295 (30%), Gaps = 34/295 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A              + ND G  I  +  +   R    
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR-------------H-ND-GDFIIRIEDTDQKRN--- 50

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIR 246
           + + +    E             E   +Y     +  +E + P++     S +A      
Sbjct: 51  IEDGEKSQLENLAWLGMNWDESPENPGEYGPYRQSERKEIYQPLIDQLLASNRAYKCYCT 110

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +      E   + G   +   +       QG         P++      DM 
Sbjct: 111 EEELEAEREAQRARGEMPHYAGTCANLTPEEQAEKEAQGLESVVRFRVPRNTEYAFTDMV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYV 364
           +  + F S  +G D    + K DG  TY       F    +     + +V+ G DH    
Sbjct: 171 KGAISFESDNIGGDF--VIQKRDGMPTYN------FAVAVDDHLMKITHVLRGDDHIANT 222

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
            +   +  A              +  +       K+SKR    +       E+G 
Sbjct: 223 PKQLMIYEAFGWTPPTFGH----MTLIINSETGKKLSKRDESILQFIEQYRELGY 273


>gi|296134000|ref|YP_003641247.1| leucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032578|gb|ADG83346.1| leucyl-tRNA synthetase [Thermincola potens JR]
          Length = 822

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        G+   ++   K     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 13  KWQKIWDDMGLHKVKDNRSKPKYYALEMF-PYPSGNLHMGHVRNYSIGDVVARFKTMQGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|316934221|ref|YP_004109203.1| valyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601935|gb|ADU44470.1| valyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 957

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 18/171 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +      V +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFMDDVPFPTVYIHALV---RDEKGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I   +++D+ G+D++RF  L    ++  D      + +   N    +  A   CR    
Sbjct: 579 VIDPLNLIDQYGADALRFT-LAAMAAQGRDIKLATSRVEGYRNFATKLWNA---CRFAEM 634

Query: 467 QAKDIFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENATI 514
                  D DF      +   I  E+     E+   +    +    E A  
Sbjct: 635 NGCAAAKDFDFTAAKDTLNRWIAHETVRAVREVTEAIESYRFNDAAEAAYR 685


>gi|150399535|ref|YP_001323302.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012238|gb|ABR54690.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 1033

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 22/167 (13%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G+D  + +     A++A V         ++        D    KMSK  G+ ++   V +
Sbjct: 557 GNDQVTKWFYSQHALSAVVFNDTPYKKCMMHGF---TLDETGEKMSKSLGNIVSPDEVTE 613

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + G+D +RF +L    + E L F + ++ E        +  YA++    +          
Sbjct: 614 KYGADVLRFYLLSANKAWEDLRFSYSEMDEVRSALNTLWNSYAFSTNYMVL--------- 664

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE-PYK 520
              D F  N    +   D         L+    V ++A  A E P+ 
Sbjct: 665 ---DEFIPNNEYFKHLKDEDAW----ILSRVNTVSKDAIEALEKPHL 704


>gi|302389340|ref|YP_003825161.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199968|gb|ADL07538.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 817

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         +        K     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 12  KWQKRWEEQKLYKVNEDDKKPKYYCLEMF-PYPSGKLHMGHVRNYSIGDVVARFKRMKGY 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|217977843|ref|YP_002361990.1| glutamyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217503219|gb|ACK50628.1| glutamyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 473

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L  P    T   D  + ++ F +  + D     LL+SDG+ TY    LA     ++ G  
Sbjct: 145 LRAPLDGETLIDDKVQGRVTFANKDLDDF---VLLRSDGAPTYM---LAVVVDDHDMGVT 198

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
            +I   G DH     R   + AA+      +       + L       K+SKR G     
Sbjct: 199 QIIR--GDDHLTNAARQMQIYAALGWSAPAMAH-----IPLIHGADGAKLSKRHG----- 246

Query: 411 RHVVDEVGSDSVRFM 425
                 +G D+ R M
Sbjct: 247 -----ALGIDAYRAM 256


>gi|207092570|ref|ZP_03240357.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 643

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 85/278 (30%), Gaps = 37/278 (13%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+    +  KG +  +     N TG +H+GH     + D LA      GY+   +  ++ 
Sbjct: 29  IDGNEKIQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDH 88

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   D                  E  +K    +L   +   
Sbjct: 89  AG--IATQNVVEKQLLNQGIKKED-------LGREAFVQKVWEWKEKSGGAILEQMKRLG 139

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFISEDDFHRGD----PSPIRDI-IDNLARQ 283
           +      +   M K ++  +K A    ++  +   D +  +       + DI ++   R+
Sbjct: 140 VSAAFSRTRFTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDGALSDIEVEYEERK 199

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------------GDDVDRPLLKSDGS 330
           G +Y         K        R + LF  + +             G  V  PL+     
Sbjct: 200 GALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDERYRHLVGQKVILPLIH---R 256

Query: 331 YTYFAAD------LAYFKCKYERGFDNMIYVMGSDHSG 362
                AD            K   G D   Y +G  H  
Sbjct: 257 TIPIIADAHVEMEFGTGCVKVTPGHDFNDYEVGKRHHL 294


>gi|167764394|ref|ZP_02436519.1| hypothetical protein BACSTE_02782 [Bacteroides stercoris ATCC
           43183]
 gi|167697799|gb|EDS14378.1| hypothetical protein BACSTE_02782 [Bacteroides stercoris ATCC
           43183]
          Length = 508

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGAEKYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +++  KY   LL+  +  ++       ++A    I   
Sbjct: 68  GIPFDEGVSFGGEHGPYRQSERRDIYKKYVQVLLDAGK-AYIAFDTPQELEAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L  +G  Y         +     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTMPKEEVDALIAEGRQYVVRFKIEPDEDVHVNDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +          L+         K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|222056164|ref|YP_002538526.1| valyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565453|gb|ACM21425.1| valyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 886

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 23/216 (10%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +     E+   ++V +  LV   RD    KMSK  G+ I    V+D  G+D+ 
Sbjct: 493 WVARMMMMGLHFMEEVPFVDVYIHALV---RDAQGQKMSKSKGNVIDPLTVIDSYGTDAF 549

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF  L    ++  D    + +     N          +  +  R A       D D    
Sbjct: 550 RFT-LAAFAAQGRDIKLAEERIAGYRNFA-------NKIWNASRFAMMNLEGFDPDAVKA 601

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRE 541
           +    E E   ++  ++  L E    +E +  A      A  LY    S F   +    E
Sbjct: 602 D----ELELSNADRWILYRLNETAGEVEESLNAYRFNDAAAALYRFTWSEFCDWY---IE 654

Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
             +    + ++ + T  R  L      ++   L ++
Sbjct: 655 LVKDDLYKGDSTRQTTARYIL----WMVLEHLLRLL 686


>gi|83951105|ref|ZP_00959838.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83839004|gb|EAP78300.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 964

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 345 YERGFDNMIYVMGSDHSGYV--KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           Y+R F     V G D   +    R+  +  AV ++     V L  LV   RD    KMSK
Sbjct: 559 YKRYFPTSTLVTGQD-ILFFWVARMMMMQLAVVDQVPFDTVYLHGLV---RDAKGKKMSK 614

Query: 403 RAGDFITLRHVVDEVGSDSVRF 424
             G+ I    ++DE G+D++RF
Sbjct: 615 STGNVIDPLEIIDEYGADALRF 636



 Score = 37.6 bits (86), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 2/106 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
               +     L         +  G N        +I     N TG +H+GH     + D 
Sbjct: 6   TFDAAAAEARLIEAWEQAGAFRAGANAKPGRDSYSIMIPPPNVTGVLHMGHAFNNTLQDI 65

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           L       G++   +   + AG     +      +  +   +   D
Sbjct: 66  LIRWKRMQGFDTLWQPGTDHAGIATQMVVERELAKEGKKRTDFSRD 111


>gi|332993374|gb|AEF03429.1| leucyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 867

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  N   +  K     +   P+G +H+GH R   +GD ++  
Sbjct: 7   NPKDIEQRVQQYWEENNSFQANDDVEKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRY 66

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 67  QRMQGKNV 74


>gi|313625377|gb|EFR95167.1| glutamyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 491

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 43/308 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NVADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLP 231
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     K   
Sbjct: 61  QMKNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQQLLDKGLAYKCYC 112

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             ++   +   +    ++   + +      E                    QG+      
Sbjct: 113 TEEELEAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEEQGFKPSIRF 159

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     +
Sbjct: 160 KVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISH 213

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   +  A   +      +      L  +    K+SKR G  I   
Sbjct: 214 VLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFI 266

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 267 EQYRDLGY 274


>gi|288802784|ref|ZP_06408221.1| isoleucine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334601|gb|EFC73039.1| isoleucine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 1221

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSK  G+      ++D
Sbjct: 737 GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMSKHVGNVTNPFEMMD 793

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           + G+D VRF M+      + L FD   V E
Sbjct: 794 KYGADPVRFYMMTNSEPWDNLKFDPEGVDE 823


>gi|227821920|ref|YP_002825890.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340919|gb|ACP25137.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 947

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 28/207 (13%)

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           +W+  ++ + +   +               +F+ E        + I+  I +        
Sbjct: 432 EWMENIQPWCISRQLWWGHQIPAWYGPDGQVFV-EKTEEEALHAAIQHYIAHEGPMKAYV 490

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRS-----TMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           E +L   K       D D     F S     + +G   + P L+      Y+  D+    
Sbjct: 491 EDLLENFKPGEILTRDEDVLDTWFSSALWPFSTLGWPTETPELEK-----YYQTDV---- 541

Query: 343 CKYERGFDNMIYVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                GFD +I+   +       +  +      A        + +      L RD    K
Sbjct: 542 --LVTGFD-IIFFWVARMMMMGLHFMK-----DADGTPVEPFHTVYVHA--LVRDKNGQK 591

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMM 426
           MSK  G+ I    ++DE G+D++RF +
Sbjct: 592 MSKSKGNVIDPLELIDEYGADALRFTL 618


>gi|241204713|ref|YP_002975809.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858603|gb|ACS56270.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 516

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 97/327 (29%), Gaps = 39/327 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q     
Sbjct: 16  PNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQTARAEGITAQALADR 75

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N  +              +++   +   +   +      +   +             +A 
Sbjct: 76  NSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWYSVRDEAY 135

Query: 242 MKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGI 290
            +    +L+A  +++        ++ E  +          ++ +                
Sbjct: 136 YQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHYEANPDFIGPAERRNE 195

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-----Y 345
           +        +   + R    +   +  D      +  D    Y  A   Y + K      
Sbjct: 196 VISFVKSGLKDLSVSRTTFDWGIKVPDDPAHVMYVWVDALTNYITA-TGYIEDKNGPRAK 254

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
               D  ++++G D    + R  AV   A  +S K      +      L +     KMSK
Sbjct: 255 YWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG---EKMSK 305

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWR 429
             G+ +   ++V+  G D VR+  L  
Sbjct: 306 SLGNVVDPVNLVNHFGLDQVRYFFLRE 332


>gi|24380018|ref|NP_721973.1| methionyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|24378007|gb|AAN59279.1|AE014994_9 putative methionyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 669

 Score = 41.1 bits (95), Expect = 0.48,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       ++V                 L    +  Q    
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNHDV------------FYLTGLDEHGQKIQQKSE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGITPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + +I  +    G V  GI P       +   +  + 
Sbjct: 117 GDIYLGEYSGWYSVSDEEFFTESQLEEIFRD--EDGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLA------YFKCKYERG 348
              R +   D            ++ DG               DLA       +  K    
Sbjct: 171 YFLRLSNYADRLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSN 230

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G     +    +     V   V +   + + +   ++ +  
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQDAHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DLKMPERLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 339


>gi|261253668|ref|ZP_05946241.1| leucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937059|gb|EEX93048.1| leucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 858

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  N      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVNEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|253995630|ref|YP_003047694.1| valyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982309|gb|ACT47167.1| valyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 962

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 62/247 (25%), Gaps = 40/247 (16%)

Query: 93  LSPSYLRKILSSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             P  +           G         K     I     N TG +H+GH     + D L 
Sbjct: 20  FDPKTIESKWYEFWEGHGYYGAGLDTAKQDNFCILLPPPNVTGTLHMGHGFNQTLMDALT 79

Query: 152 SLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
                 G     +   + AG   QI                                  V
Sbjct: 80  RYHRMRGDNTLWQPGTDHAGIATQI----------------------------------V 105

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            +   D       +   EK+L  V ++   +   I +  ++ L    D          G 
Sbjct: 106 VERQLDAQGVSRHDLGREKFLEKVWEWKEYSGGTITKQ-MRRLGTSPDWSRERFTMDAGL 164

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329
              + +    L  +G +Y G               D + +          ++ PL  +DG
Sbjct: 165 NKVVTETFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQEEEDGFMWHINYPL--ADG 222

Query: 330 SYTYFAA 336
           S     A
Sbjct: 223 SGHLTVA 229


>gi|218883935|ref|YP_002428317.1| leucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765551|gb|ACL10950.1| leucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 971

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N      K  I         P+H+GH R   +GD +A      
Sbjct: 13  IEAKWQARWRENRVFEANPEPGKPKYFITVPYPYSNAPLHIGHGRTYTIGDIIARYKRLK 72

Query: 158 GYEV 161
           GY V
Sbjct: 73  GYNV 76


>gi|218248716|ref|YP_002374087.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257061779|ref|YP_003139667.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218169194|gb|ACK67931.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591945|gb|ACV02832.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 535

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 111/326 (34%), Gaps = 46/326 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G     ++ D +A      G  V      ++ G +I   A        Q   +   + 
Sbjct: 25  HIGSAYTTMIADVIARFKRLQGSSVLLITGTDEHGQKIERTA-EAKGLEPQEHCDRIVES 83

Query: 197 PEGYYPGVYLKH--VGKELADKYSSELLNFPEEKW----LPIVKDYSVQ----AMMKIIR 246
            E  +  + +++    +  A  + + +  F +  W    + + +            K  R
Sbjct: 84  FESLWQKLNIQYDRFSRTTAKNHGAIVKEFFQRVWEQGDIYLAQQQGWYCVPCEEFKEKR 143

Query: 247 DDLK------------ALNIQHDIFISEDDFHRGDPSPIRD---IIDNLARQGYVYEGIL 291
           + L+                + + F    ++     +  ++    I+  +R+  V     
Sbjct: 144 ELLEDGCCPLHPNKKAEWRDEENYFFRLSNYQEKLETLYQEHPEFIEPESRRNEV----- 198

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-----AYFKCKYE 346
               S   Q   + R  + +   + GDD     +  D    Y  A L     A  +    
Sbjct: 199 ISFVSGGLQDFSISRVNVAWGFPVPGDDNHTIYVWFDALLGYITALLEPDQEAGLENALS 258

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           + +   ++++G D    + R  AV   A  +S K      +      L +DG   KMSK 
Sbjct: 259 QWWPINLHLIGKD----ILRFHAVYWPAMLMSAKLPLPKQIFSHGF-LTKDGQ--KMSKS 311

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ +    +V+  GSD+VR+  L  
Sbjct: 312 LGNTVNPFDLVERYGSDAVRYYFLKE 337


>gi|163752480|ref|ZP_02159669.1| leucyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327624|gb|EDP98819.1| leucyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 863

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            PS +   +         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   KPSEIEAKVQQHWQDNKTFEVTEDENKEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|152992414|ref|YP_001358135.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225309|sp|A6Q8G9|SYC_SULNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151424275|dbj|BAF71778.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 465

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 99/325 (30%), Gaps = 39/325 (12%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R ++  D L+  +   GY+V            +      +  +  +
Sbjct: 27  CGPTVYDDAHLGHARSSLAFDLLSRTLKALGYKVI-----------MAKNFTDIDDKIIK 75

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +      + E      Y      +  ++   +  +   +    +  D   Q +  +I  
Sbjct: 76  KVEETGKSMQE---ITSYYIQRYLDEMEQLGVQRADIEPKATESL--DAIEQMIQTLIDK 130

Query: 248 DLKALNIQHDIFI-SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           D   +    D++  +  D H GD S              V +          ++K +   
Sbjct: 131 DFAYVVSNGDVYFDTSKDSHYGDISH------------KVSDDDTQSRVEHNSEKRNPRD 178

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             L  ++    +D+      S G   +     A  +  ++      I + G         
Sbjct: 179 FALW-KACKGEEDICFGAPFSSGRPGWHIECSAMIEKYFKGNGQYSIDIHGGGADLLFPH 237

Query: 367 LEAVAA----AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
            E  AA    A   + A+  +        +      KMSK  G+   L+  ++  G + +
Sbjct: 238 HENEAAQSRCATGHELAKYWMH-----NGFVQINGEKMSKSLGNSFFLKDALEVYGGEVL 292

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSK 447
           R+ +         +F+   ++   K
Sbjct: 293 RYYLNSVHYRNDFNFNEEDLQTAKK 317


>gi|148244174|ref|YP_001218868.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166231651|sp|A5CY09|SYL_VESOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146326001|dbj|BAF61144.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 815

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 23/73 (31%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+      + K           +         K     +   P+G +H+GH R   +GD 
Sbjct: 2   NIKYDVQKIEKQAQKYWKEKKSFEVIEDYSKEKYYCLSMFPYPSGRLHMGHVRNYSIGDV 61

Query: 150 LASLMAFSGYEVT 162
           ++      G  V 
Sbjct: 62  ISRFQRMQGKNVM 74


>gi|72080974|ref|YP_288032.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914098|gb|AAZ54009.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 790

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG----YVKRLEAVAAAVSE--K 377
           +LK    Y    + +AY K K     D  +Y+ G +H+     Y +    V         
Sbjct: 486 ILKEKDKYLPLDSKIAYDKFKKWLPVD--LYIGGQEHAVGHLIYSRFWHKVLFDAGIVPN 543

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                 ++ + + L  DG   KMSK  G+ I    ++D+ G+D++R  ++
Sbjct: 544 SEPFQKIIHQGMLLGSDGQ--KMSKSKGNTINPTEMIDKFGADTIRIFLM 591


>gi|332992323|gb|AEF02378.1| isoleucyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 939

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 12/142 (8%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADLAYFK 342
           + E +    ++K  Q         L  S     D       +    G   YF  D     
Sbjct: 496 LMEKVAAEVETKGIQAWWDIDDAALLGSEADNYDKVTDTLDVWFDSGVTHYFVVD----- 550

Query: 343 CKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            + +      +Y+ GSD   G+       + A+        VL         D    KMS
Sbjct: 551 QREDIPASADLYLEGSDQHRGWFMSSLMTSTAMHGHAPYKEVLTHGF---TVDAHGRKMS 607

Query: 402 KRAGDFITLRHVVDEVGSDSVR 423
           K  G+ +  + V +++G+D +R
Sbjct: 608 KSVGNVVAPQEVTNKLGADILR 629


>gi|294634955|ref|ZP_06713473.1| isoleucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091664|gb|EFE24225.1| isoleucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 948

 Score = 41.1 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 30/184 (16%)

Query: 296 SKTTQKCDMDRKQLLFRST---MVGDDVDRPLLKSD--------GSYTYFAADLAYFKCK 344
               Q+ +    Q  +      ++GD+ D+     D        GS +Y   D      +
Sbjct: 505 EAVAQRVEQSGIQAWWDLDIRELLGDEADQYEKVPDTLDVWFDSGSTSYSVVDA-----R 559

Query: 345 YERG-FDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
            E G     +Y+ GSD   G+      +A A+  K     VL         DG   KMSK
Sbjct: 560 PEFGGHSPDMYLEGSDQHRGWFMSSLMIAVAMKGKAPYRQVLTHGF---TVDGQGRKMSK 616

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ ++ + V++++G D +R  +     +  +     ++ ++S +        AY R R
Sbjct: 617 SVGNVVSPQQVMNKLGGDILRLWVASTDYTGEMAVS-DEILKRSAD--------AYRRIR 667

Query: 463 SIFR 466
           +  R
Sbjct: 668 NTAR 671


>gi|317477070|ref|ZP_07936312.1| isoleucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906863|gb|EFV28575.1| isoleucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|317051233|ref|YP_004112349.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946317|gb|ADU65793.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 884

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 124/380 (32%), Gaps = 68/380 (17%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DF 265
           +V  E+  + +S+ +   E +++P   + +    M  IRD      I   ++       +
Sbjct: 362 YVNVEVMAQKASDAVRTKEVRFVPENWEKTYFHWMDNIRD----WCISRQLWWGHRIPAW 417

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +  +   I   ++   ++                        QL   +TM        L 
Sbjct: 418 YCEECGHITVTVEMEVQRCEKCSSAHIRQDDDVLDTWFSS--QLWPFATMGWPGSTATLE 475

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           K      Y  + L          FD +I+         V R+       +++K    V +
Sbjct: 476 KF-----YPTSVLVTA-------FD-IIFFW-------VARMIMAGYTFTDQKPFQEVYI 515

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
             LV   RD    KMSK  G+ I    ++D+ G+D++RF ++ +      +  D  ++  
Sbjct: 516 HALV---RDKYGRKMSKSVGNVIDPLGIIDQYGADALRFTLISQAGQGRDIKLDIDRI-- 570

Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL-- 502
              E    +V     +  +  R      P+      P N+   ++         I  +  
Sbjct: 571 ---EGYTTFV----NKMWNALRFTLHTMPEHPSSQLPENLAISDAWILGRLNATIAEVRR 623

Query: 503 ----AEYPRVIENATIAQEP-YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557
                ++     +A I +    +L  +  +LA   H  +            + ++ +   
Sbjct: 624 GLDGYQFNE--ASAAIYRFIWQELCDWYIELAK--HRLY------------KGSDEEKAG 667

Query: 558 MRLQLVHAVASIINSGLNII 577
               L H     + + + ++
Sbjct: 668 ASAVLCHC----LLTSMKLL 683



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 56/198 (28%), Gaps = 33/198 (16%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y       +      +    +  +   +    +I     N TG +H+GH  C  + D L 
Sbjct: 7   YYDSQQSERKWYQAWLDKNYFHADEHSQKPAYSIVIPPPNVTGYLHIGHALCMTLQDVLI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GY                           +AL+   +D        V  K +  
Sbjct: 67  RYKRMDGY---------------------------EALWLPGTDHASIATQIVVEKQLA- 98

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
               +   + +    E +L  V ++   +   +I + LK L    D              
Sbjct: 99  ----EKGIDRVQLGREAFLEKVWEWKEHSG-SMIVEQLKRLGCSCDWERERFTMDEQCNR 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            + +    L  +G +Y G
Sbjct: 154 GVMEAFVRLYHEGIIYRG 171


>gi|225630101|ref|YP_002726892.1| valyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|225592082|gb|ACN95101.1| valyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 823

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 68/215 (31%), Gaps = 38/215 (17%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +I+  G +  R   GK     I+      +G +H+GH       D +A      G +V 
Sbjct: 15  CNILWEGSKVYRWNGGKDNTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDVF 74

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
             Y I                        +D+ LP         K   KE+  +   E+ 
Sbjct: 75  --YPIG----------------------FDDNGLPTERLVEQTYKTRAKEVGREKFIEMC 110

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           +   EK     K+              K++ I +D  +      +   +  +    +L  
Sbjct: 111 HEVIEKSKQEFKEL------------FKSVGISYDWDLEYHTISKETVTLSQMSFIDLYN 158

Query: 283 QGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTM 315
           +GY Y  + P        T     + +  +F S++
Sbjct: 159 KGYAYRKMQPILWDPVDKTAIAQAEIEDKVFESSL 193


>gi|218131045|ref|ZP_03459849.1| hypothetical protein BACEGG_02648 [Bacteroides eggerthii DSM 20697]
 gi|217986749|gb|EEC53082.1| hypothetical protein BACEGG_02648 [Bacteroides eggerthii DSM 20697]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|210634098|ref|ZP_03297986.1| hypothetical protein COLSTE_01904 [Collinsella stercoris DSM 13279]
 gi|210158949|gb|EEA89920.1| hypothetical protein COLSTE_01904 [Collinsella stercoris DSM 13279]
          Length = 904

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
           + +V R+   +    ++    +V++   + L +DG   +MSK  G+ +    ++D  G+D
Sbjct: 491 ALWVARMVMSSLYFLDEVPFKDVVIYPTI-LAKDG--SRMSKSKGNGVDPMDLIDMYGAD 547

Query: 421 SVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           ++RF +L    N++ + FD    K+  K       + A A    I+  ++ +  ++D
Sbjct: 548 AMRFNLLTLCTNNQDVKFDADIDKKTKKLKGSPRTEQARAFVTKIWNASRFLLMNMD 604


>gi|169829674|ref|YP_001699832.1| leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688206|sp|B1HXY7|SYL_LYSSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168994162|gb|ACA41702.1| Leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 805

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     K     L  + + L       KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEG--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +++  GSD++R
Sbjct: 584 VVNPDEIIESHGSDTLR 600


>gi|167763023|ref|ZP_02435150.1| hypothetical protein BACSTE_01388 [Bacteroides stercoris ATCC
           43183]
 gi|167699363|gb|EDS15942.1| hypothetical protein BACSTE_01388 [Bacteroides stercoris ATCC
           43183]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|150389212|ref|YP_001319261.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949074|gb|ABR47602.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 884

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 70/266 (26%), Gaps = 39/266 (14%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P      +     +   +   +       +I     N TG +H+GH     + D L    
Sbjct: 11  PQEFEDRIYKEWENKGYFKPVINPDKESYSIVLPPPNITGQLHMGHALDHTLQDILIRWK 70

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G+E   +      G    ++A  V    +       S L  G            E  
Sbjct: 71  RMQGFETLWQP-----GTDHASIATEVKVVEKIKREEGLSKLDIG---RDGFLQRAWEWR 122

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           D++   ++N                         +K +    D          G    + 
Sbjct: 123 DEHGRTIVNQ------------------------MKRMGDSCDWSRERFTMDEGCNEAVT 158

Query: 275 DIIDNLARQGYVYEGIL------PPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLLKS 327
           ++   L  +G +Y G            S +  + + + K   F        D D  +  +
Sbjct: 159 EVFIKLYEKGLIYRGNRIINWCPECKTSLSDAEVEHEDKAGHFWHIQYPIKDTDEYIEIA 218

Query: 328 DGSYTYFAADLAYFKCKYERGFDNMI 353
                    D        +  ++++I
Sbjct: 219 TTRPETMLGDTGIAVHPEDERYNHLI 244


>gi|288560827|ref|YP_003424313.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
 gi|288543537|gb|ADC47421.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
          Length = 480

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 105/353 (29%), Gaps = 52/353 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT----LALSVFW 183
                    H+GH R  +  DT+   + F GY V     I D   +I        +   +
Sbjct: 21  CGPTVYDDAHIGHGRTYISFDTIKRYLEFKGYSVFYLQNITDIDDKIINRAKESGIDSKY 80

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             ++       D+       V       +  ++   ++    ++ +  + +      + K
Sbjct: 81  LAEKFEKRFIEDMAALNVTSVNYFARATDHIEEILDQIQRLIDKGYAYVTETGVYFEVAK 140

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              +D   L        S       +   I       +   +        P+       D
Sbjct: 141 F--EDYGKL--------SNRKLEDLETHRIDIDSSKKSPHDFALWKNREAPEYAGEPVWD 190

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVMG 357
               +                    G   +   D A  +  +   +D      ++I+   
Sbjct: 191 SPWGK--------------------GRPGWHIEDTAITEKYFGPQYDIHGGGLDLIF--- 227

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
                +     A   AVS K+  +   +      + +    KMSK  G+FIT+R ++ E 
Sbjct: 228 ----PHHDSEIAQMEAVSGKEPLVQYWMHTG---FLNVSGEKMSKSLGNFITIRELLKEY 280

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKV--KEQSKENPVFYVQYAYARCRSIFRQA 468
             D+ R  +L       +DF    +   E++      Y++    +   IF + 
Sbjct: 281 SGDTFRLFVLLTHYRSPIDFSEVSLHQAERNVSRIKNYLENLDEKINDIFEKG 333


>gi|282897916|ref|ZP_06305911.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197060|gb|EFA71961.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 859

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
              V S ++  +    K             P+G +H+GH R   + D +A L    GY V
Sbjct: 18  WQQVWSELDLDKTPQDKNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRV 77


>gi|257466462|ref|ZP_05630773.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 931

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +           +L    V    DG   KMSK  G+ +   
Sbjct: 559 LYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVN---DGKGEKMSKSKGNVVAPE 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R         E +      VK+ ++          Y R R+  R     
Sbjct: 616 KIIKQYGADILRLWCASVDYREDVKISDNIVKQMAE---------TYRRVRNTARYILGN 666

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               D     ++ +P +   +  +  L   L    + +  +    E
Sbjct: 667 SYGFD---PKKDAVPYQDLLEIDKWALHK-LEMLKKSVGESYEKYE 708


>gi|257452605|ref|ZP_05617904.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 931

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +           +L    V    DG   KMSK  G+ +   
Sbjct: 559 LYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVN---DGKGEKMSKSKGNVVAPE 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            ++ + G+D +R         E +      VK+ ++          Y R R+  R     
Sbjct: 616 KIIKQYGADILRLWCASVDYREDVKISDNIVKQMAE---------TYRRVRNTARYILGN 666

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               D     ++ +P +   +  +  L   L    + +  +    E
Sbjct: 667 SYGFD---PKKDAVPYQDLLEIDKWALHK-LEMLKKSVGESYEKYE 708


>gi|153009571|ref|YP_001370786.1| valyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561459|gb|ABS14957.1| valyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 910

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 12/143 (8%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MDEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           DE G+D++RF + +       +  D  ++                 +  +  R A+    
Sbjct: 570 DEYGADALRFTLAIMAAQGRDVKLDPARIAGYRNFGT---------KLWNATRFAQMNGV 620

Query: 474 DLDFDLFPRNVIPQESEFDTSEL 496
            LD    P N     + +  +EL
Sbjct: 621 KLDAGFKPENAKLAVNRWILTEL 643


>gi|330799736|ref|XP_003287898.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
 gi|325082101|gb|EGC35595.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
          Length = 566

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 51/160 (31%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
             GP H+GH   A++GD  A    F G +                               
Sbjct: 45  VNGPPHIGHLYTALLGDAFARWNRFKGNDTY--------------FMTGT---------- 80

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                                  D++  ++    ++K L  +      ++    ++  K 
Sbjct: 81  -----------------------DEHGMKVDEAAKKKGLKTID--YCDSISNRFKELFKL 115

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             IQ+D FI            +  + + L  +GY+Y+G+ 
Sbjct: 116 SEIQYDDFI--RTTEPRHRDAVTAMWNRLLEKGYIYKGVY 153


>gi|302342845|ref|YP_003807374.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639458|gb|ADK84780.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 830

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +       S +        K     +E     P+G +H+GH R   +GD LA L    G
Sbjct: 19  ARWQGRWSESRLFDVDEDPAKPKYYLLEMF-PYPSGRIHMGHMRVYSIGDALARLKRMRG 77

Query: 159 YEV 161
           + V
Sbjct: 78  FNV 80


>gi|134279208|ref|ZP_01765921.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|254193176|ref|ZP_04899611.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|134249627|gb|EBA49708.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|169649930|gb|EDS82623.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 734

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|53721846|ref|YP_110831.1| tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52212260|emb|CAH38282.1| putative tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 734

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|76817892|ref|YP_337561.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254189889|ref|ZP_04896398.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254263827|ref|ZP_04954692.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
 gi|76582365|gb|ABA51839.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157937566|gb|EDO93236.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254214829|gb|EET04214.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
          Length = 734

 Score = 41.1 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|254796895|ref|YP_003081732.1| isoleucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590131|gb|ACT69493.1| isoleucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 1045

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 86/258 (33%), Gaps = 34/258 (13%)

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEE---KWLPIVKDYSVQAMMKI-----IRD 247
           +P  Y     +K    EL D  +    +  E    KWL   KD+++           I  
Sbjct: 408 VPSWYLSVSKIKERMLELNDSINWIPAHLKEGLVGKWLENAKDWAISRNRFWGTPVPIWK 467

Query: 248 DLKALNIQHDIFIS----EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
                + + D++ S    E DF        R  ID L R+          P  K++    
Sbjct: 468 STDPSHPRIDVYGSITEIEKDFGVKITDLHRPFIDTLTRKN------PDDPTGKSSMVRV 521

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
                  F S  +                Y   +  +F+  +   F   I    +   G+
Sbjct: 522 ESVLDCWFESGSMPF----------AQVHYPFENKEWFEKNFPSDF---ITEYVAQTRGW 568

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
              L  ++ A+          L   V L +DG   K+SKR  ++   + + DE G+D++R
Sbjct: 569 FYTLMVLSVAL-FDSVPFKNCLAHGVILDKDGK--KLSKRLNNYKDPKELFDEYGADALR 625

Query: 424 FMMLWRKNSELLDFDFCK 441
           F+ML             K
Sbjct: 626 FLMLSSSVMNGGTLLIDK 643


>gi|237508333|ref|ZP_04521048.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
 gi|235000538|gb|EEP49962.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
          Length = 734

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|217418703|ref|ZP_03450210.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
 gi|217398007|gb|EEC38022.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
          Length = 737

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 20  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 79

Query: 155 AFSGYEV 161
              GY V
Sbjct: 80  RMQGYNV 86


>gi|194476850|ref|YP_002049029.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora]
 gi|171191857|gb|ACB42819.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora]
          Length = 916

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 100/296 (33%), Gaps = 34/296 (11%)

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFHRGDPS 271
           +   ++ L F  ++W  + +++ +      I   L     + +   I  +    +   P 
Sbjct: 383 EALDTDHLKFVPKRWEKVYRNWLIDIRDWCISRQLWWGHQIPVWFVISETNSQLNEHTPY 442

Query: 272 PIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
            +    ++ L +    Y   +   + +             F +    D            
Sbjct: 443 IVARTSVEALEQARECYGDKIVINQDEDVLDTWFSSGLWPFSTLGWPDSN---------- 492

Query: 331 YTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
               +AD   +        GFD +I+         V R+  +A++ ++K     V +  L
Sbjct: 493 ----SADFQCWYPNSTLVTGFD-IIFFW-------VARMTMMASSFTKKMPFKEVYIHGL 540

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           V   RD    KMSK  G+ I    ++D  G+D++RF ++W       D           E
Sbjct: 541 V---RDENNCKMSKSMGNGIDPLVLIDRYGADALRFALVWEVAGAGQDIRLDY---NRNE 594

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
           N    V+ +      I+   +    +L+         P   +   S+  ++  LA+
Sbjct: 595 NTSLKVESSRNFANKIWNACRFTLMNLNDQNTNNLGTPDPRQLKLSDRWILSRLAQ 650


>gi|126653473|ref|ZP_01725566.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Bacillus sp.
           B14905]
 gi|126589751|gb|EAZ83885.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Bacillus sp.
           B14905]
          Length = 458

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 98/292 (33%), Gaps = 47/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +                  +Q++ L  
Sbjct: 10  APSPTGFLHIGGARTALFNYLYAKHHNGKFIVRIED----TDIERNVEGGEASQLDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               ++    Y+   D+   Y P  Y +    ++  +++ +LL           K +   
Sbjct: 64  ----KWLGIEYDESIDIGGPYAP--YRQMERLDIYKEHAEKLLEQG-----AAYKCFCSS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R++ KA  +    +         +              G  Y   +  P++ T 
Sbjct: 113 EKLEASREEQKARGVAAPTYDGTCRHLSAEEVA------AKEAAGEPYTIRMRVPENVTY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              D+ R Q+ F S  +GD     ++K++G  TY       +    +  F  + +V  G 
Sbjct: 167 DFEDLVRGQVTFESKDIGDW---VIVKANGIPTYN------YAVVLDDHFMEISHVFRGE 217

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +H     +   +  A   +  +   +      L  +    K+SKR    I  
Sbjct: 218 EHLSNTPKQMMIFDAFGWEYPRFGHM-----TLIINENRKKLSKRDESIIQF 264


>gi|23499963|ref|NP_699403.1| isoleucyl-tRNA synthetase [Brucella suis 1330]
 gi|81751628|sp|Q8FX81|SYI_BRUSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|23463543|gb|AAN33408.1| isoleucyl-tRNA synthetase [Brucella suis 1330]
          Length = 972

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     + +            +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKE-CRELASNWIK------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   +   
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVAT 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|126445547|ref|YP_001062206.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126456148|ref|YP_001075169.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312751|ref|ZP_04811768.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
 gi|126225038|gb|ABN88543.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126229916|gb|ABN93329.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135990|gb|EES22393.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
          Length = 734

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|242780148|ref|XP_002479535.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218719682|gb|EED19101.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1414

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 31/205 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            +S +   K L         + R          +        G +HVGH    ++ D + 
Sbjct: 397 RVSVADQAKYLRKCSDELYAWQRENRPANETFVLHDGPPYANGELHVGHSLNKILKDIIN 456

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G    R +Y+           L +  +  QA   N  D  +G      ++   +
Sbjct: 457 RTQLSRG---KRIHYVPGWDCH----GLPIELKALQAQQKNVIDFTQGPGSAATIRKAAR 509

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +LA+K   E +         + + + + A  +     L                 +G   
Sbjct: 510 KLAEKTVKEQMR--------VFRGFGIMADWEGHWKTLD----------------KGFEM 545

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
               I   +  +G +Y    P   S
Sbjct: 546 KQLGIFREMVEKGLIYRRFKPVYWS 570


>gi|144897808|emb|CAM74672.1| Glutamyl-tRNA synthetase, class Ic [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 470

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 88/290 (30%), Gaps = 52/290 (17%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQIN 175
              +   + +PTG +H+G  R A+     A       L+     +  R        A ++
Sbjct: 1   MQVVTRFAPSPTGFLHIGGARTALFNWLFARHHGGRFLLRIEDTDRARS-----TQAAVD 55

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   + W                       + +  E    Y        +         
Sbjct: 56  AIFDGLKWLGLDGDGEPVFQFARMDRHAEVARQLVAEGKAYYCYCSPEELD--------- 106

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            +++A  K     ++   I  D   SE     G P  +R                L  P+
Sbjct: 107 -AIRAQQKAEGKPMRYPGIWRDRDASEAP--AGVPGVVR----------------LRAPQ 147

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              T   D+ + ++   +  +    D  LL++DG+ TY  + +      ++ G  ++I  
Sbjct: 148 EGETVIDDLVQGEVKVANAQLD---DMVLLRADGTPTYMLSVV---VDDHDMGITHVIR- 200

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            G DH     R   +  A      +        + L       K+SKR G
Sbjct: 201 -GDDHLTNAFRQYQLYKACGWDVPRFAH-----IPLIHGPDGAKLSKRHG 244


>gi|85713011|ref|ZP_01044049.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693180|gb|EAQ31140.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 859

 Score = 41.1 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS + + +         +      +  K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPSAIEQAIQQRWQEDKVFEVTEQPEKEKFYCLSMFPYPSGKLHMGHVRNYTLGDVVSRY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRMQGKNV 73


>gi|330811820|ref|YP_004356282.1| Isoleucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379928|gb|AEA71278.1| Isoleucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 943

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 74/235 (31%), Gaps = 29/235 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------G 329
              G ++   +   + +  ++ + +  +  F+   + ++GD+       SD        G
Sbjct: 483 KESGELHPRTVELME-EVAKRVESEGIEAWFKMDAAELLGDEAPLYDKISDTLDVWFDSG 541

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  +           +E G    +Y+ GSD   G+         A+        +L    
Sbjct: 542 TTHWHVLR-GSHPMGHETGPRADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRELLTHGF 600

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                D    KMSK  G+ I  + V D +G        + R      D+       +   
Sbjct: 601 ---TVDESGRKMSKSLGNVIAPQKVNDTLG------ADIMRLWVASTDYSGEMAVSEQ-- 649

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                +Q +    R I   A+ +  +L       +++P E         +   L 
Sbjct: 650 ----ILQRSADAYRRIRNTARFLLSNLTGFNPATDLLPAEEMLALDRWAVDRTLL 700


>gi|290769947|gb|ADD61716.1| putative protein [uncultured organism]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|254167740|ref|ZP_04874590.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289597141|ref|YP_003483837.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623268|gb|EDY35833.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534928|gb|ADD09275.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 939

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 28/205 (13%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
              +          +     +    K  I       +G +H+GH R   +GD +A     
Sbjct: 4   AAIERKWQRKWQNDKIFEPKVENKKKFFITVPYPYMSGSLHIGHGRTFTMGDIIARFKRL 63

Query: 157 SGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            GY V     +++   G  +  +A ++    ++ +           Y   Y++ + ++  
Sbjct: 64  QGYNVLFPMAFHV--TGTPVLAIADAIKAGDEKVI---------NLYK-EYVR-IYEDDE 110

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271
           D+    + +F E + +        +   +  + D   +    D       FH  +P    
Sbjct: 111 DRVEEIVSSFVEPENIA-------RYFAEKTQQDFIGMGYSID---WRRKFHTAEPIYNK 160

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
            +      L  +G + +G  P   S
Sbjct: 161 FVEWQFKKLYDKGVIKKGKYPITYS 185


>gi|218295459|ref|ZP_03496272.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244091|gb|EED10617.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 480

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 127/390 (32%), Gaps = 52/390 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                    H+GH R  +V D L       GY+V     I D G                
Sbjct: 29  CGPTVYADPHLGHARGPIVYDVLRRYFLHKGYKVRFVSNITDVG---------------- 72

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKI 244
            L  +D    +        K    E+A+KY+     F     L +++          +  
Sbjct: 73  HLTEDDEGEDKVAKRAKLEKLEPMEVAEKYTWSY--FDAMAALNVLRPSIAPRASGHIPE 130

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-TQKCD 303
           + +  + L  +   ++ E   +      +R   +     G   E +    + +   +K D
Sbjct: 131 MWELTQKLLERGVAYVREGSVYF----RVRAFPEYGKLSGKRPEELRAGARVEVREEKED 186

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKS---DGSYTYFAADLAYFKCKYERGFDNMIYVMGSD- 359
                L  R+    +       KS   +G   +     A        GFD  ++  G D 
Sbjct: 187 PLDFALWKRA----EPGHLMRWKSPWGEGYPGWHIECTAMSLKYLGEGFD--LHAGGIDL 240

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              + +   A A A   + A+  +    ++         KM+K  G+ + L  ++     
Sbjct: 241 QFPHHECEIAQAEAAGYRFARHWMHHNHVL-----LEGEKMAKSTGNLVLLHDLLRAHEP 295

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFD 478
            +VRF +L       +DF F  ++   K      +  AY   R+  + A K   P+L+  
Sbjct: 296 MAVRFYLLQTHYRSPMDFTFAGLEAAKKG--YARLLNAYREVRARKKTAPKGTTPELERA 353

Query: 479 LFPRN---VIPQESEFDTSELQLIVHLAEY 505
           L       +   E +  T E      LA++
Sbjct: 354 LEALEKGFMAAIEDDLSTPE-----ALAQF 378


>gi|153009409|ref|YP_001370624.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561297|gb|ABS14795.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 515

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 127/425 (29%), Gaps = 55/425 (12%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++   
Sbjct: 1   MSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQS 60

Query: 178 AL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           A               + F +    L +++ D         Y        A   + ++  
Sbjct: 61  ARKEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMAGNGDIYK 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNLA 281
                W  +  +         +R+D      Q     ++ E+ +     +    ++D   
Sbjct: 121 GGYAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYE 180

Query: 282 RQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           +  G++        +        +   + R    +   + GD+     +  D    Y  A
Sbjct: 181 KNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITA 240

Query: 337 DLAYFKCKYERGFDNMIY------VMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387
            L Y     +   +   Y      ++G D    + R  AV   A  +S        +   
Sbjct: 241 -LGY----PDTSDEKWGYWPADAHIIGKD----ISRFHAVYWPAFLMSAGIPLPKRVFAH 291

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
                R     KMSK  G+ I    +V+  G D +R+  L R+     D  +      ++
Sbjct: 292 GFLFNRG---EKMSKSLGNVIDPFGLVERYGLDQLRYF-LMREVPFGQDGSYSHDAIVNR 347

Query: 448 ENPVFYVQYAYARCRSIFRQAKD---------IFPDLDFDLFPRNVIPQE---SEFDTSE 495
            N            RS+   AK+          F D D  +  +     E      D   
Sbjct: 348 TNADLANDLGNLAQRSLSMIAKNCEGKVPVPGEFSDADKAILDQADAALETARKAMDDQA 407

Query: 496 LQLIV 500
           L L +
Sbjct: 408 LHLAL 412


>gi|91762511|ref|ZP_01264476.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718313|gb|EAS84963.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 844

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 90/291 (30%), Gaps = 45/291 (15%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N     +   +       + +   +    +     +E     P+G +H+GH R   +GD 
Sbjct: 5   NF---KTVEERWQKFWHKNKVFSSKLDKTRKKFYCLEMF-PYPSGKIHMGHVRNYTIGDV 60

Query: 150 LAS--------LMAFSGYE------------------VTREYYINDAGAQINTLALSVFW 183
           LA         ++   G++                     E  I    +Q+  L LS+ W
Sbjct: 61  LARYKMLQGYNVLHPMGWDSFGMPAENAARQNNLDPKTWTESNIKTMRSQLKKLGLSIDW 120

Query: 184 RYQ-----QALYNNDSDLPEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
             +     +  Y +  +     Y  G+  +       D     +L   +       +  +
Sbjct: 121 DKEISTCSEDYYKHQQEFFLDLYDKGLVYRKENYVNWDPVDETVLANEQVVDGKGWRSGA 180

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +    K+ +          D+    D      P+ ++ +  N   + +  E        K
Sbjct: 181 IVERKKLNQWFFNISKFSEDLLQGLDALEN-WPNKVKVMQKNWIGKSFGCEVEFKIESEK 239

Query: 298 TTQ--KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             +  KC   R   LF  + +   VD PL K      Y+  D  + K + E
Sbjct: 240 PIESIKCYTTRPDTLFGFSFLALSVDHPLAK------YYEEDKEFQKFREE 284


>gi|91794074|ref|YP_563725.1| isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716076|gb|ABE56002.1| Isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 943

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 71/197 (36%), Gaps = 30/197 (15%)

Query: 348 GFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +  +Y+ GSD   G+      ++ A++ K     VL         DG   KMSK  G+
Sbjct: 559 GHEVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF---TVDGKGRKMSKSVGN 615

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            I   HV +++G+D +R  +     S  +     ++  +S +        AY R R+  R
Sbjct: 616 VIAPLHVTNKLGADILRLWVAATDYSGEMTVS-DEILNRSAD--------AYRRIRNTAR 666

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQL----IVHLAEYPRVIENATIAQEPYK 520
                     F L   N    E++   SE  + L    +   A   + I  +      + 
Sbjct: 667 ----------FLLANLNGFNPETDMVASEDMVALDRWVVRRAAALQQEIIESYDQYNFHN 716

Query: 521 LAFYLYDLAS-VFHGHW 536
           +   L    S      +
Sbjct: 717 VTQKLMQFCSVELGSFY 733


>gi|324121070|gb|AAC48266.3| Valyl amino-acyl trna synthetase protein 1, partially confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 978

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 58/403 (14%), Positives = 122/403 (30%), Gaps = 58/403 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S S+    ++       E+      K G+   +     N TG +H+GH     V D +  
Sbjct: 29  SSSFNIDEVTQNFEQRTEFAAANYRKNGSLFRMVLPPPNVTGKLHLGHALTVAVEDAICR 88

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G +                                   +P   + G+  + V ++
Sbjct: 89  HQRNQGNKA--------------------------------EWIPGFDHAGIATQVVVEK 116

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
           +  K     L    E+++     +  +     IR  L  +    D   S           
Sbjct: 117 ILAKNGKRRLEMTREEFVKECHLWG-EKCSSEIRQQLTRMGASLDWTQSYYTLDSKFSEA 175

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +      L ++  +  G        T              ST+   +V+R  + SDG   
Sbjct: 176 VTKAFCILEQEDLITRGKRLVHWCPT------------LSSTLSSQEVNRIDVPSDGYIN 223

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             ++     + K+ +       ++ S+ S +++        +    A + V   +     
Sbjct: 224 LSSSSGTRRRVKFGQMHVIRYNLVDSE-SEFIEVGTTRPETLFADVA-VAVHPEDDRYSK 281

Query: 393 RDGMPI---KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD-FCKVKEQSKE 448
             G  +       R    IT   V  E G+ +V+       + + LD++ + +    + +
Sbjct: 282 FHGKHVWSPVTPGRKLFVITDSAVSVEKGTGAVKI----TPSHDALDYEIWNRWILNAGQ 337

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           N +   ++A          + + F  +D       VI + SE 
Sbjct: 338 NTIE--EFACIDAEGKMTNSGEDFDGMDRFEAREKVIQKLSEL 378


>gi|317480151|ref|ZP_07939261.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316903698|gb|EFV25542.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|311896027|dbj|BAJ28435.1| putative valyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 879

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 40/268 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P+ +   L    V    +  +   +     I     N TG +H+GH     + D L 
Sbjct: 24  TYAPAEVEGELYERWVERGYFTADAKSEKPAYTIVIPPPNVTGALHLGHAFQHTLMDALT 83

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G+E             ++   ++   + +Q L   ++ L               
Sbjct: 84  RRKRMLGFEAL-------WLPGMDHAGIATQNKVEQQL--AEAGLSRHDLGRAAFVDKVW 134

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y   +L                          ++ L    D          G   
Sbjct: 135 EWKENYGGRILGQ------------------------MRRLGDGVDWSRERFTMDEGLSQ 170

Query: 272 PIRDIIDNLARQGYVYEGILPP------PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
            ++ I   L   G +Y              + +  + D +       S   GD  D  ++
Sbjct: 171 AVQTIFKKLFDDGLIYRAERIINWCPRCLTALSDAEVDHEDLPGELVSIRYGDGEDSIVV 230

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMI 353
            +  + T    D A      +  + +++
Sbjct: 231 ATTRAET-LLGDTAVAVHPSDERYAHLV 257


>gi|302388972|ref|YP_003824793.1| glutamyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199600|gb|ADL07170.1| glutamyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 496

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 108/343 (31%), Gaps = 60/343 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ-INTLALSVFWRYQQ 187
           + +PTG +H+G  R A+      +L+            I D   +     +++   R  +
Sbjct: 10  APSPTGSLHIGGARTALF-----NLLFARHNNGVFVLRIEDTDTERSTEESVAQILRSMK 64

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  +  + PE G   G Y +    EL  K +  LL+  +                    
Sbjct: 65  WLGLDWDEGPEKGGDYGPYFQSQRLELYRKEAQRLLDEGKA------------YYCYCTP 112

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
           ++L A             +     +   +       +G      L  P+   T   D+ R
Sbjct: 113 EELAARREAMMKAGKAPRYEGLCRNLCDEDRKRYEAEGRKPVIRLKVPQEGQTVVEDIIR 172

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             ++F ++++ D +   ++KS+G  TY   + A     +     ++I     +H     +
Sbjct: 173 GTVVFENSVLDDFI---IMKSNGMPTY---NFACVVDDHAMKITHVIR--AEEHLSNTPK 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------------- 407
              V  A+  +  +        V +       K+SKR G                     
Sbjct: 225 QIQVYKALGYELPRFAH-----VPMILAPDRSKLSKRHGATSVEEFRDQGYLSQAIINYL 279

Query: 408 -------ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                  +    + D     ++R   L R N     +D  K+ 
Sbjct: 280 TLLGWSPLDSEEIFDM--EKAIREFTLERVNKTAAIYDIKKLT 320


>gi|254719936|ref|ZP_05181747.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984944|ref|ZP_06097679.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838525|ref|ZP_07471363.1| isoleucyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264663536|gb|EEZ33797.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406392|gb|EFM62633.1| isoleucyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 972

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------IQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P   + + 
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVSG 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|224009692|ref|XP_002293804.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220970476|gb|EED88813.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 579

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 41/342 (11%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH   ++  D +A  M  SG +V      ++ G ++ T A +             +  
Sbjct: 78  HIGHAYTSLACDVIARYMRLSGRDVFFLSGTDEHGQKVETTAKNANMEPLAFCDMVSASF 137

Query: 197 PE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
            E           +++   ++             E+  + +       ++      +   
Sbjct: 138 KELLTLLNISNDEFIRTTDEDHKKAVQHLWNVLVEKGAIYLGSYEGWYSVRDECYYNESE 197

Query: 252 L-------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           L         + +    ED +       + +  D L      +   + P   K      +
Sbjct: 198 LVDGKAPTGAEVEWVKKEDSYFF----KLSEYQDELLNYYEAHPDFIAPESRKNEVVSFV 253

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD--------LAYFKCKYERGFDNM---- 352
                    +    D   P+   D    Y   D        L Y   +    FD      
Sbjct: 254 KGGLKDLSISRTTFDWGVPVPGDDDHVMYVWIDALTNYMSALGYPNTEPGGNFDKFWPAS 313

Query: 353 IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           ++V+G D    H+ Y     A   A      +            +DG   K+SK  G+ I
Sbjct: 314 LHVVGKDILRFHAVY---WPAFLLAAGIPLPKRIFAHGWW---TKDGE--KISKSLGNVI 365

Query: 409 TLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKEN 449
               ++D  G D  RF ++         DF   K+  +   N
Sbjct: 366 DPVELIDTYGVDPTRFFLMSEVVFGNDGDFSDEKMIYKVNAN 407


>gi|160893352|ref|ZP_02074139.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
 gi|156865044|gb|EDO58475.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
          Length = 468

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 133/377 (35%), Gaps = 38/377 (10%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DTL   + + GY+V    Y+++       +   +  R  +     DS 
Sbjct: 35  IHIGNARPMIVFDTLRRYLTYKGYDV---NYVSN----FTDVDDKIIKRANE--EGVDSK 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +    +     K +      + ++      E           +  M+K + +   A  + 
Sbjct: 86  VISERFIAETKKDMAAMNVQEATTHPKATEE--------IPDMIEMIKTLIEKGHAYEVN 137

Query: 256 HDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             ++     F   D   +    ID+L   G+  E        +  ++  +D   +L++  
Sbjct: 138 GTVYFRTRSF--ADYGKLSHKNIDDL-ESGHRAENHQLKVSGQDEKEDPLDF--VLWKPK 192

Query: 315 MVGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373
             G+   + P  +    +    + ++      ++   ++I +            E   A 
Sbjct: 193 KEGEPFWESPWGEGRPGWHLECSVMS------KKYIGDIIDIHAGGEDLIFPHHENEIAQ 246

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
            SE           +   +      KMSK  G+F T+R + D+     +RF ML      
Sbjct: 247 -SEAANDKEFARYWMHNGFLKINNEKMSKSLGNFFTVREIADKYPLQVIRFFMLSAHYRS 305

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---RQAKDIFPDLDFDLFPR--NVIPQE 488
            L+F    V  ++ +N +  +  A  + +S+     +  D+  + + D + +       +
Sbjct: 306 PLNFSADLV--EASKNGLERILTAVDKLKSLAPADVEGSDVSVEAELDGYTKRFETAMDD 363

Query: 489 SEFDTSELQLIVHLAEY 505
                  + +I  L +Y
Sbjct: 364 DLNTADAISVIFELVKY 380


>gi|145590523|ref|YP_001152525.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166231633|sp|A4WHK6|SYL_PYRAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145282291|gb|ABP49873.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 945

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 34/205 (16%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++    L +           Y         K  I      P G +H+GH R  ++ D L
Sbjct: 7   FFIE---LGEKWQKRWAEARVYEPAPTLGVPKFFITAAYPYPNGAIHIGHGRTYLIADVL 63

Query: 151 ASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
           A      G  V     ++    G  I T+A ++    +  +           Y  +Y   
Sbjct: 64  ARFHRHLGRAVLFPMAFHY--TGTPILTIAEAIAAGDETVVEE---------YMAIY--- 109

Query: 209 VGKELADKYSSELLNFPEEKWLPIVK-DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
                           PEE+   +    Y  +   +  +  ++   +  D          
Sbjct: 110 --------------GVPEEEMRKMGDPLYLARYFHEQSKRAMQKFGLSIDWTREFTTIDP 155

Query: 268 GDPSPIRDIIDNLARQGYVYEGILP 292
                I+   + L ++G +  G  P
Sbjct: 156 EYQRFIQWQFEKLRKKGLIVRGRHP 180


>gi|160901828|ref|YP_001567409.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|226695263|sp|A9BF22|SYL_PETMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160359472|gb|ABX31086.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 828

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +           +  +      K     +   P+G +HVGH +  V+GD +A
Sbjct: 4   TYNPQEIERKWQRNWQEKDAFKVSNEEYHKKYYDLVMFPYPSGTLHVGHVKNYVIGDVIA 63

Query: 152 SLMAFSGYEVT 162
                 GY V 
Sbjct: 64  RYKRMRGYNVM 74


>gi|70732626|ref|YP_262389.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|84029559|sp|Q4K5U4|SYI_PSEF5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68346925|gb|AAY94531.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 943

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 29/235 (12%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSD--------G 329
              G ++   +   + +  Q+ + +  +  F+   + ++GD+  +    SD        G
Sbjct: 483 KESGDLHPRTVELME-EVAQRVEQEGIEAWFKMDAAELLGDEAAQYDKISDTLDVWFDSG 541

Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCEL 388
           +  +           +E G    +Y+ GSD   G+         A+ +  A    LL   
Sbjct: 542 TTHWHVLR-GSHPMGHESGPRADLYLEGSDQHRGWFHSSLLTGCAI-DNHAPYRELLTHG 599

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
             +  +G   KMSK  G+ I  + V D +G        + R      D+           
Sbjct: 600 FTVDENGR--KMSKSLGNVIAPQKVNDTLG------ADIMRLWVSATDYSGEMAVSDQ-- 649

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                +Q +    R I   A+ +  +L       +++P E         +   L 
Sbjct: 650 ----ILQRSADAYRRIRNTARFLLSNLSGFNPATDLLPAEDMLALDRWAVDRTLL 700


>gi|51891154|ref|YP_073845.1| glutamyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|67461731|sp|Q67TJ2|SYE_SYMTH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|51854843|dbj|BAD39001.1| glutamyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 482

 Score = 41.1 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 93/290 (32%), Gaps = 40/290 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTGP+HVG+   A+     A       ++ F   ++ R             +   +
Sbjct: 7   IAPSPTGPIHVGNVHTALFNWLFARHHGGKFILRFEDTDLERS-----RPEWEQVIFEDL 61

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W         D   P     G Y +    +L  KY+ +LL         + K Y  +  
Sbjct: 62  KWLGIDWDEGPDIGGP----YGPYRQTERLDLYRKYAQQLLESG-----HVYKCYCTKEE 112

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
               R + +A    +       D         +   +   R+  +       P+ +  + 
Sbjct: 113 EDADRREAQAAGRPYQYKGRCRDL----TPEQQAAFEAEGRKPVLR---FRVPRGEVIRF 165

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D+ R  +   +  +GD +   +++++G   Y   + A           +++   G  H 
Sbjct: 166 NDLVRGPIEVPTDSIGDFI---IMRANGMPLY---NFAVVVDDVTMNITHVLR--GEGHI 217

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                   +  A+     +    L  +    R     K+SKR G+     
Sbjct: 218 PNTPVQILIYQALGFPVPEFGH-LGHMTNPERG----KLSKRKGEAAIRD 262


>gi|268318912|ref|YP_003292568.1| hypothetical protein FI9785_418 [Lactobacillus johnsonii FI9785]
 gi|262397287|emb|CAX66301.1| cysS [Lactobacillus johnsonii FI9785]
          Length = 470

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 137/442 (30%), Gaps = 70/442 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V    Y+++     + +         +
Sbjct: 27  CGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV---NYVSNFTDVDDKMI-----NEAR 78

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             +     L E Y            +        L+      +  + D+    + K    
Sbjct: 79  KEHTTVEKLAERYIKAFMEDTEALNIE----PATLHPRATHEIKEIIDFVQDLIDKGF-- 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A  +  D++     F           I  L       E I    +SK     D    
Sbjct: 133 ---AYEVDGDVYYRARKFPNYG-QLSDQNIAELEEG--ASEHINEEEQSKKEDPIDF--- 183

Query: 308 QLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L  ++    D++  D P  K    +      +       +   D  I + G        
Sbjct: 184 ALW-KAQKEEDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFP 236

Query: 366 RLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             E  +A + ++   +          +       KMSK   +F+T+  ++ ++    +RF
Sbjct: 237 HHENEIAQSEAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQVLRF 296

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
            M   +    +++    +K+                  +I ++ ++   +LD  L   N 
Sbjct: 297 YMSSVQYRRPINYSEDGLKQAE----------------TILKRYQNTLRNLDARLNDENE 340

Query: 485 IPQESEFDTSELQLIVHLAEYPRV------IENATIAQEPYKLAFYLYDLASVFHGHWSH 538
             +++        L    AE+         ++NA        +    YDLA+  +   +H
Sbjct: 341 TLEDNGLRD---DLTQAKAEFIEAMDDDFNVQNAL-----SIM----YDLATTLN---NH 385

Query: 539 GRENPRLRFVQANNRKLTMMRL 560
            +++   +      +KL +  L
Sbjct: 386 LQKDQVDKPALKRAKKLLIAWL 407


>gi|149194971|ref|ZP_01872064.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134892|gb|EDM23375.1| glutamyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 461

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 102/297 (34%), Gaps = 59/297 (19%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +   + +PTG +H+G  R A+     A     +G                        
Sbjct: 1   MIVTRFAPSPTGYLHIGGLRTALFNWLWAR--KNNG------------------------ 34

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +  L   D+DL          +     +   ++   LN+ +E    + +        
Sbjct: 35  ---KFRLRIEDTDLSRN------KQEAVDAIIKAFNWTGLNYDDEV---VFQSERFDIYK 82

Query: 243 KIIRDDLKALNIQHDIFISEDDFH-------RGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           K I + LK   + +  ++++++         +G+  PI DI      +G + +  +   K
Sbjct: 83  KYIDELLKK-GLAYKCYLTKEELETIREAKRKGETPPI-DIRKYRDFEGELDKEYVIRFK 140

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
           +    +   +      +   + +  D  + +SDG+ TY    +       E G  ++I  
Sbjct: 141 TPLEGELCFEDGVKGKQCVKLSEIEDFVIARSDGTPTYNFVVV---IDDKEMGMTDIIR- 196

Query: 356 MGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            G DH     K++  V  A + K  +        V +  +    K+SKR G    + 
Sbjct: 197 -GDDHLRNTFKQI-LVYKAFNWKVPKFYH-----VPMIHNEKGAKLSKRDGAVDVME 246


>gi|253579512|ref|ZP_04856781.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849013|gb|EES76974.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 469

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 20/117 (17%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+F T+R + ++     +RF ML       L+F    ++               
Sbjct: 268 KMSKSLGNFRTVREISEQYDLQVLRFFMLNAHYRSPLNFSADLMEAA------------- 314

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
                  + A +   D   +L  R    Q      +E +L+    E+ +  E A   
Sbjct: 315 -------KNALERITDAAANLKDRKAAAQTETATDAEKELLAQAQEFVKKFEEAMDD 364


>gi|171319741|ref|ZP_02908829.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095013|gb|EDT40036.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 945

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 77/228 (33%), Gaps = 27/228 (11%)

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--------GS 330
              G ++   L   +   K  ++  ++  Q L    ++GDD +      D        G+
Sbjct: 499 KETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANMYEKNRDTLDVWFDSGT 558

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELV 389
             +        K + +   D  +Y+ GSD   G+       A+ +  +     +L     
Sbjct: 559 THWHVLR-GSHKDQLQFPAD--LYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGF- 614

Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
               DG   KMSK  G+ +    V + +G++ +R  +     S  L      +K  ++  
Sbjct: 615 --TVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEG- 671

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
                   Y R R+  R       D D+      V  +  E D   + 
Sbjct: 672 --------YRRIRNTLRFLLANLSDFDYAQHAVPV-DEWLEIDRYAVA 710


>gi|327310453|ref|YP_004337350.1| valyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946932|gb|AEA12038.1| valyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 806

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 55/195 (28%), Gaps = 37/195 (18%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             + L         +   +   G  + I+     P+G  H+G        D +A      
Sbjct: 24  WEEDLIRAWEREGLFAIRINPDGDYLVIDTPPPYPSGRPHIGGTAHYAQIDMVARFFRMR 83

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY V   +Y++  G  +                                     ++  KY
Sbjct: 84  GYNVIFPFYLDRNGLPVEV-----------------------------------QVERKY 108

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                  P EK+L + K   + ++ K      +   +    +    D      +  +   
Sbjct: 109 GINAHEVPREKFLEMCKAE-LDSLEKEFVSIFRRWGMSFTYWDKGTDSEEY-RAMTQKTF 166

Query: 278 DNLARQGYVYEGILP 292
             L R+G +YE   P
Sbjct: 167 IELWRRGLIYEAERP 181


>gi|332653421|ref|ZP_08419166.1| glutamate--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518567|gb|EGJ48170.1| glutamate--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 495

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 87/278 (31%), Gaps = 34/278 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+    +A     +G          D   Q+      ++    + 
Sbjct: 25  APSPTGYMHIGNLRTALYTWLIAR---NAGGTFILRIEDTDQTRQVEGATELIYKTLAEC 81

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             ++D     G     Y++   ++   KY+  L+             Y          +D
Sbjct: 82  HLDHDEGPDVGGPVAPYVQTERRDTYGKYAQLLVEKG--------HAYYCFCEKTESEED 133

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               N   D           +     D        G  Y      P   TT   D     
Sbjct: 134 SGDFNRAADPC---RSLSLEEAQARVDA-------GEPYVIRQKIPYEGTTTFHDAIFGD 183

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +  +    D+ L+K DG  TY   + A     +  G  ++  V GS++     +  
Sbjct: 184 ITVENKTLD---DQVLIKRDGLPTY---NFANVIDDHLMGITHV--VRGSEYLSSAPKYN 235

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +             + C  V   RD    KMSKR GD
Sbjct: 236 LLYEGFGWDIP--TYVHCSPVM--RDAQH-KMSKRHGD 268


>gi|306840970|ref|ZP_07473711.1| isoleucyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289027|gb|EFM60292.1| isoleucyl-tRNA synthetase [Brucella sp. BO2]
          Length = 972

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    ++ D +       GY      Y+         +   +  +Y+ A 
Sbjct: 63  PYANGNIHIGHALNKILKDVITRSFQMRGYNS---NYVPGWDCHGLPIEWKIEEKYRAAG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E K L I+ D+           + 
Sbjct: 120 KNKD-EVPINEFRKECREFASNWIK-------VQTEEFKRLAILGDFENPYTTMNFHAE- 170

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEGILP-------PPKSKTTQ 300
             +  +   F +    +RG    +  +++   LA     Y  I         P     + 
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGGVSG 230

Query: 301 KCDMDRKQLLFRST 314
           + D+    ++  +T
Sbjct: 231 ENDLSGSAVVIWTT 244


>gi|269836370|ref|YP_003318598.1| isoleucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785633|gb|ACZ37776.1| isoleucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 43/187 (22%)

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            RD    +M K  G+ I      + +G+D +R++ L    ++ L+F F    E  ++  +
Sbjct: 588 LRDERGEEMHKSKGNAIWFDDAAERMGADVMRWLYLKHNPAQNLNFGFSLGDEARRQFIL 647

Query: 452 FYVQ-YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRV 508
                YA+    +                      P E +   +E  L+    L+    V
Sbjct: 648 PLWNSYAFFANYAAL----------------DGFNPAEHDVPLAERTLLDRWILSRLQEV 691

Query: 509 IENATIAQEPYKLAFY-------------LYDLASVFHGHWSHGRENPRLRFVQANNRKL 555
           +          +L+ Y             + DL++     +   R N R  +   ++R  
Sbjct: 692 V-RVVRD----RLSDYDSLNAARAIEEFVVEDLSN----WY--IRRNRRRFWKTESDRDK 740

Query: 556 TMMRLQL 562
               L L
Sbjct: 741 AAAYLTL 747


>gi|220912738|ref|YP_002488047.1| leucyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859616|gb|ACL39958.1| leucyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 841

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 96  SYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           + +      +     +    +   +  +  ++     P+G +H+GH     +GD +A  +
Sbjct: 27  AAMEARWPQVWEDLKVFTPADDGSRERRYVLDMF-PYPSGDLHMGHAEAFAMGDVVARYL 85

Query: 155 AFSGYEV 161
              G++V
Sbjct: 86  RQQGFDV 92


>gi|218283691|ref|ZP_03489652.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
 gi|218215680|gb|EEC89218.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
          Length = 443

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 71/447 (15%), Positives = 134/447 (29%), Gaps = 54/447 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL   ++  GYEVT      D   +I   A+      Q       +D 
Sbjct: 36  HIGNARPIVVFDTLKKALSAQGYEVTFASNYTDVDDKIIKTAIE-----QNVSEKEITDK 90

Query: 197 PEGYYPGVYL-KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
               Y  V    H          +E ++   E    +VK+ S   +   +        + 
Sbjct: 91  FIAAYNDVRRGLHADLPDYAPRVTETMDRIIEFIDKMVKNGSAYQVGGDVY-----FRVN 145

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D    E      D   +   ID   ++                   +      L++ T 
Sbjct: 146 SDKKYGELSHQSIDDLMVGARIDENEKK-------------------ENPLDFTLWKETT 186

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAV 374
            G   D P   S G   +    +   +  +++    +I + G          E  +A   
Sbjct: 187 EGIKWDSPW--SKGRPGWHTECVVMIQDVFKK---TLIDIHGGGLDLKFPHHENEIAQCE 241

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                 +  +      +  +G  IKMSK  G+    + ++   G +  R++M+       
Sbjct: 242 VCNDTHLANIWVHNGMINING--IKMSKSLGNVWWAKDLIANHGGNLTRWLMISTHYRAP 299

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494
           L+ +        KE       Y  A  + +   A++     D           +     +
Sbjct: 300 LNLNEEAFATSKKELDKIAAAYKQACVKLVLSSAQEATT-FDETYTAFIDALNDDLNTPN 358

Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG----HWSHGRENPRLRFVQA 550
            + ++  L +    I  A   +E         +LA + H      +  G E  ++     
Sbjct: 359 AISVVYELVK---KINQAVRQREIDV-----ENLAVLVHTLEKMLYILGIEFDKVSMTNE 410

Query: 551 NNRKLTMMRLQLVH---AVASIINSGL 574
           +       R  +       A  +   L
Sbjct: 411 DKEMYQNWRSAVKEKDFKTADTLRQTL 437


>gi|195590645|ref|XP_002085055.1| GD14596 [Drosophila simulans]
 gi|194197064|gb|EDX10640.1| GD14596 [Drosophila simulans]
          Length = 938

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 84/230 (36%), Gaps = 30/230 (13%)

Query: 348 GFDNM--IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G D +  +Y+ G D  +G+ +    ++ A  E      + +        D    KMSK  
Sbjct: 575 GKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGF---TVDEKGYKMSKSL 631

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I+ + +  + G+D++R+ +       +      K+ +Q+ EN         ++ R  
Sbjct: 632 GNVISPKQITKKYGTDALRWWVASHGTQHMSITVSDKLLQQAAEN--------LSKIRGT 683

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R  K +  +          + + S+       L+  L E+   +E    A E  ++   
Sbjct: 684 LRYLKGVIGE----KQSGENLTRTSDKSYLNRYLLSQLVEFESEVEKLYQAYEYNRVVAC 739

Query: 525 LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + +A+     + H     + R    ++ +L         A+   +   
Sbjct: 740 VQNFIANQVSAVYVH---LIKDRLYCGDDLEL--------LAIRQTLTHC 778


>gi|160888272|ref|ZP_02069275.1| hypothetical protein BACUNI_00682 [Bacteroides uniformis ATCC 8492]
 gi|156862218|gb|EDO55649.1| hypothetical protein BACUNI_00682 [Bacteroides uniformis ATCC 8492]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|145596005|ref|YP_001160302.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305342|gb|ABP55924.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 872

 Score = 41.1 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 53/191 (27%), Gaps = 33/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +      V+G  +  +         I     N TG +H+GH     + D L       G
Sbjct: 25  EQRRYEQWVAGGHFRASAESDKPPYTIVIPPPNVTGSLHMGHALDHTMQDALVRRKRMQG 84

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y                           +AL+    D        V  + +G++   ++ 
Sbjct: 85  Y---------------------------EALWVPGMDHAGIATQNVVERQLGEQGLSRHD 117

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K  S  A++  +R     L    D          G    ++ +  
Sbjct: 118 LGREAFVERVWE--WKAESGGAILGQMR----RLGDSVDWERERFTMDAGLSRAVQTMFK 171

Query: 279 NLARQGYVYEG 289
            L   G +Y  
Sbjct: 172 ALYDDGLIYRA 182


>gi|295698309|ref|YP_003602964.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157462|gb|ADD79907.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 865

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K +         +  N+  K  K     +   P+G +H+GH R   +GD +A   
Sbjct: 9   PKEIEKYVQEYWEKNKTFRVNMDVKKKKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARCQ 68

Query: 155 AFSGYEV 161
              G  V
Sbjct: 69  RMLGKNV 75


>gi|291276430|ref|YP_003516202.1| valyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963624|emb|CBG39456.1| valyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 877

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 80/250 (32%), Gaps = 41/250 (16%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +  + +  K     I     N TG +H+GH     + D +       GY    +  ++ A
Sbjct: 21  DGNQKIQQKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMQGYRTLYQPGLDHA 80

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
           G  I T  +       Q +   D                                 E+++
Sbjct: 81  G--IATQNIVEKQLLSQGIVKED------------------------------LGREEFI 108

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             V ++  ++  KII     +L I      +     +G  + +R+       +G + +G 
Sbjct: 109 KKVWEWKEESGGKIIEQMY-SLGITPAWSRARFTMDKGLANAVREAFVTWYEKGLIIQGD 167

Query: 291 L-------PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                       S    + + ++ +L +    + D  D  ++ +    T+F  D A    
Sbjct: 168 YMVNWCTHDGALSDIEVEYEENQGKLYYLRYPIKDSTDSLIVATTRPETFF-GDTAVMVN 226

Query: 344 KYERGFDNMI 353
             +  + ++I
Sbjct: 227 PKDSRYTHLI 236


>gi|195160211|ref|XP_002020969.1| GL25089 [Drosophila persimilis]
 gi|194118082|gb|EDW40125.1| GL25089 [Drosophila persimilis]
          Length = 949

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 115/333 (34%), Gaps = 49/333 (14%)

Query: 250 KALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +A  +   +  S        + + I  +   L  QG +        +     +   D   
Sbjct: 496 RAWGVPIPVLYSRKSGQVVLNAALIEHLCSLLRSQGSMDFWWSRSLEDLLPPQIAADLGY 555

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRL 367
            + +  + G D+      S  +++           K E+  D  +Y+ G D  +G+ +  
Sbjct: 556 EV-KDLVKGSDILDIWFDSGSTWS--------AVLKKEQVAD--LYLEGYDQFTGWFQSS 604

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              + A  +      + +        D    KMSK  G+ I+ + +  + G+D++R+ + 
Sbjct: 605 LLTSIAARDCAPYKALFVHGF---TVDEKGHKMSKSLGNVISPKQITKKYGTDALRWWVA 661

Query: 428 WRKNSELLDFDFCKVKEQSKEN------PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
                        K+ +++ EN       + Y++        I  + ++   +L+  +  
Sbjct: 662 SHGTQHTSITVSDKLLQKATENLSKVRGTLRYLK------GVIGEKQREGREELEQPILD 715

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGR 540
            + + +          L+ +L ++   IE    A E  ++   + + +A+     + H  
Sbjct: 716 ASFLNKY---------LLSNLLDFESEIEKLYNAYEYNRVVACIQNFIANQVSSIYVH-- 764

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              + R    ++R+L         A+   +   
Sbjct: 765 -LIKDRLYCGDDREL--------LAIRQTLTHC 788


>gi|15237594|ref|NP_201210.1| ERS (GLUTAMATE TRNA SYNTHETASE); glutamate-tRNA ligase [Arabidopsis
           thaliana]
 gi|30316183|sp|Q9FEA2|SYE_ARATH RecName: Full=Glutamyl-tRNA synthetase,
           chloroplastic/mitochondrial; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS; Flags:
           Precursor
 gi|11078546|gb|AAG29098.1|AF241841_1 Glu-tRNA synthetase [Arabidopsis thaliana]
 gi|10176953|dbj|BAB10273.1| glutamate-tRNA ligase [Arabidopsis thaliana]
 gi|332010451|gb|AED97834.1| glutamyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 570

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 115/350 (32%), Gaps = 53/350 (15%)

Query: 93  LSPSYLRK-----ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L+P++LR+        S     +      +  G  V + F + +PTG +HVG  R A+  
Sbjct: 19  LAPAFLRRRQSSLFYCSRRSFAVVACSTPVNNGGSVRVRF-APSPTGNLHVGGARTALFN 77

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPG 203
              A   +  G  V R   I D    +            Q L     D  EG       G
Sbjct: 78  YLFAR--SKGGKFVLR---IED--TDLERSTRESEAAVLQDLSWLGLDWDEGPGVSGDFG 130

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y +     L  +Y+ +LL         + + +     +  ++++   L     ++    
Sbjct: 131 PYRQSERNALYKQYAEKLLESG-----HVYRCFCSSEELVKMKEN-AKLKQLPPVYTG-- 182

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                  +     I+    +G  +      PK  + +  D+ R ++ +    +GD     
Sbjct: 183 ----KWATASDAEIEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDF---V 235

Query: 324 LLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           +++S+G   Y      D A           ++I     +H     R   +  A+     Q
Sbjct: 236 VMRSNGQPVYNFCVTVDDAT------MAISHVIR--AEEHLPNTLRQALIYKALKFPMPQ 287

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---SDSVRFMML 427
                   V L       K+SKR G     +    E+G      V ++ L
Sbjct: 288 FAH-----VSLILAPDRSKLSKRHGATSVGQ--YREMGYLPQGMVNYLAL 330


>gi|307564976|ref|ZP_07627493.1| glutamate--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346289|gb|EFN91609.1| glutamate--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 530

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 100/296 (33%), Gaps = 32/296 (10%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL----MAFSGYEVTREYYINDAG 171
                 KV + F + +PTG +H+G  R A+     A      + F   +     ++N A 
Sbjct: 24  KTMSERKVRVRF-APSPTGALHIGGVRTALFNYLFAKQNGGKLVFRIEDTDSHRFVNGAE 82

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
                +  S  W   Q  ++       G   G Y +   +++  KY  ELL+        
Sbjct: 83  ---EYIIESFKWLGIQ--FDEGVSF--GGDKGPYRQSERRDIYKKYVDELLSNG-----K 130

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
               +     ++  R +++    Q+D         R   +     +  L   G  Y    
Sbjct: 131 AYIAFDTPEELEAKRAEIENF--QYDAHTRGK--MRNSLTLSEAEVKALIDDGKQYVVRF 186

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFD 350
                +     DM R  +  ++ ++    D+ L KS D   TY    LA     +     
Sbjct: 187 KVDPGEEVHVKDMIRGDVCIKTDILD---DKVLYKSADELPTYH---LANIVDDHLMDIS 240

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           ++I   G +          +  A   +    +     L+ L  +G   K+SKR GD
Sbjct: 241 HVIR--GEEWLPSAPLHVLLYRAFGWEDTMPSFAHLPLL-LKPEGKG-KLSKRDGD 292


>gi|291287674|ref|YP_003504490.1| isoleucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884834|gb|ADD68534.1| isoleucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 931

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 41/191 (21%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           Y+ GSD   G+      +  +V  +       VL         DG   KMSK  G+ +  
Sbjct: 567 YLEGSDQHRGWFHSS--LLESVGSRGVAPYKEVLTHGFAM---DGKGRKMSKSLGNTVDP 621

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           + ++++ G++ +R  +     +E +      ++   +         +Y + R+  R    
Sbjct: 622 KEIINKFGAEILRLWVSAEDYTEDVRISQDIIQRLVE---------SYRKIRNTARYLLG 672

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKLAFYLYD 527
              D + D    +++  E   D     L+     + +V   I  A    +          
Sbjct: 673 NISDFNPD---TDMVAFEDMLDLDRYALV----RWQQVKKRIYEAYDNYQ---------- 715

Query: 528 LASVFHGHWSH 538
               FH  +  
Sbjct: 716 ----FHTFYHA 722


>gi|254456987|ref|ZP_05070415.1| glutamyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085779|gb|EDZ63063.1| glutamyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 462

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 63/408 (15%), Positives = 128/408 (31%), Gaps = 74/408 (18%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +   + +PTG +H+G  R A+     A     +G            G  +  +  +  
Sbjct: 1   MVVTRFAPSPTGYLHIGGLRTALFSYLWA---KKNG------------GEFVLRIEDTDK 45

Query: 183 WRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            R  Q   +        L   +   +  +    E+  KY  +LL+          K Y  
Sbjct: 46  ARNSQEATDAILKAFEWLGLDHDGEITYQSQRDEIYAKYIKQLLDEG-----KAYKCYMS 100

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +  +  +R+   A   +        DF    P  +  +I             +  P +  
Sbjct: 101 KEELTELRETQMANKERTKYNGKYRDFDGTPPEGVEPVI------------RIKAPLTGE 148

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D  +  + F++  + DD    + ++DG+ TY   +       +  G   +I   G 
Sbjct: 149 ILVKDGVKGNVSFQAQDILDDF--VIARADGAPTY---NFVVAIDDHLMGITEVIR--GD 201

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           DH     +   V  A+       N      V +  +    K+SKR G             
Sbjct: 202 DHLSNTPKQIVVYEALGFDVPAFNH-----VPMIHNSEGKKLSKRDG------------A 244

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           +D + +  +      LL+F   ++     +  +F +Q        +F           ++
Sbjct: 245 TDVMAYKEMGYTPQALLNF-LVRLGWSHGDQEIFSMQ----EMIELFDPKDINKSASIYN 299

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYP---------RVIENATIAQE 517
               + +      +TS  +L   L EY           ++ +A   + 
Sbjct: 300 TEKLDWLNAHYIKNTSNTELAQLLTEYDLVLTSHDKKEILLDAVKERA 347


>gi|168217640|ref|ZP_02643265.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380323|gb|EDT77802.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 514

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPVEGFEDKRVYVWIDALLAYVTASKIVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    ++ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|150390081|ref|YP_001320130.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|229559881|sp|A6TQK3|SYL_ALKMQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149949943|gb|ABR48471.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 824

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +      +     +E     P+G +H+GH R   +GD +A      
Sbjct: 9   IEKKWQERWQENKAFSIIERDRPKYYVLEMF-PYPSGKIHMGHVRNYSIGDVVARFKRMK 67

Query: 158 GYEV 161
           GY V
Sbjct: 68  GYNV 71


>gi|159044631|ref|YP_001533425.1| valyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912391|gb|ABV93824.1| valyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 1037

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV+ +     V L  LV   RD    KMSK  G+ +    ++DE G+D++
Sbjct: 648 WVARMMMMQLAVTGEVPFREVYLHGLV---RDAKGKKMSKSVGNVVDPLEIIDEYGADAL 704

Query: 423 RF 424
           RF
Sbjct: 705 RF 706


>gi|40063251|gb|AAR38078.1| leucyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 873

 Score = 41.1 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     S       +    +    K     +   P+G +H+GH R   +GD L+  
Sbjct: 6   NPQKIELGAQSYWDKTCAFSATEVQGKKKYFCLSMFPYPSGKLHMGHVRNYTIGDLLSRY 65

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 66  HRMQGYNV 73


>gi|317495673|ref|ZP_07954038.1| valyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914126|gb|EFV35607.1| valyl-tRNA synthetase [Gemella moribillum M424]
          Length = 880

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +   +  +    +  +         I     N TG +H+GH     + D L   
Sbjct: 9   NPTEVEQNRYNWWLEKEVFKADNKSNKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++V   Y        ++   +S   + +  +             G+    +G+E 
Sbjct: 69  KRLKGFDVL--YLPG-----MDHAGISTQAKVEAKMREE----------GISRYDLGRE- 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E  W         +     IR     L +  D          G    +
Sbjct: 111 ---------KFLERAW------EWKEEYAGYIRAQWAKLGLGLDYSRERFTLDEGLNKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
             I  +    G +Y G
Sbjct: 156 TKIFVDHYNNGTIYRG 171



 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ +    V+++ G+DS+R+ +           D     E+ + + 
Sbjct: 515 LVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQ---DLRYSTEKIEASW 571

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            +  +   A    I     + F   D DL     +  +        +L   + ++ R+ E
Sbjct: 572 NYINKIWNASRFVIMN--LEGFEYSDIDLSGEKTLADKYILT----KLAKTIEDFERLFE 625

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                 E  ++   LY+     F   +    E  ++     +       +  LV+    +
Sbjct: 626 K-YEFGEASRI---LYNFVWEEFCSWY---IEIAKISLNGEDEAAKKTTKSILVY----V 674

Query: 570 INSGLNII 577
           +++ L ++
Sbjct: 675 LDASLKML 682


>gi|313894560|ref|ZP_07828124.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440956|gb|EFR59384.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 822

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K           +         K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 10  LEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMK 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|307943449|ref|ZP_07658793.1| leucyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307773079|gb|EFO32296.1| leucyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 895

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +         +    N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 35  AREVEARWQKVWNDKDVFVTHNDDPRDKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARY 93

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 94  KRAKGFNV 101


>gi|299533178|ref|ZP_07046562.1| valyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718708|gb|EFI59681.1| valyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 971

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 64/199 (32%), Gaps = 37/199 (18%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           + G      G   +I+    N TG +H+GH     + D+L       GY        + A
Sbjct: 45  KPGTEATAAGNNFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGTDHA 104

Query: 171 G--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G   QI      V  R  Q               GV    +G+   D+++ ++       
Sbjct: 105 GIATQI------VVERQLQT-------------QGVSRYDLGR---DEFTKKVWE----- 137

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                K+ S   +   +R     ++   + F  +D   +     + +    L +QG +Y 
Sbjct: 138 ----WKEKSGDTITTQMRRMGDTVDWSREYFTMDDKLSK----VVTETFVKLYQQGLIYR 189

Query: 289 GILPPPKSKTTQKCDMDRK 307
           G          Q    D +
Sbjct: 190 GKRLVNWDPVLQSAVSDLE 208


>gi|264679678|ref|YP_003279585.1| valyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262210191|gb|ACY34289.1| valyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 971

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 64/199 (32%), Gaps = 37/199 (18%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           + G      G   +I+    N TG +H+GH     + D+L       GY        + A
Sbjct: 45  KPGTEATAAGNNFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGTDHA 104

Query: 171 G--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
           G   QI      V  R  Q               GV    +G+   D+++ ++       
Sbjct: 105 GIATQI------VVERQLQT-------------QGVSRYDLGR---DEFTKKVWE----- 137

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                K+ S   +   +R     ++   + F  +D   +     + +    L +QG +Y 
Sbjct: 138 ----WKEKSGDTITTQMRRMGDTVDWSREYFTMDDKLSK----VVTETFVKLYQQGLIYR 189

Query: 289 GILPPPKSKTTQKCDMDRK 307
           G          Q    D +
Sbjct: 190 GKRLVNWDPVLQSAVSDLE 208


>gi|144899871|emb|CAM76735.1| Valyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 888

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 59/216 (27%), Gaps = 33/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              PS +         +   +        +   I     N TG +H+GH     + D L 
Sbjct: 5   TYRPSEVEPKHYEQWENSGAFAARTESNQSPYTIMMPPPNVTGSLHMGHALTFTLQDVLI 64

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G +   +   + AG     +                               V +
Sbjct: 65  RYHRMAGRDALWQPGTDHAGIATQMV-------------------------------VER 93

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  K      +   +K++  V ++  ++   I R  L+ L    D          G   
Sbjct: 94  QLEAK-GITRHDLGRDKFIERVWEWKGESGGTITRQ-LRRLGASPDWAKERFTMDEGLSV 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +R +   L +QG +Y                 D +
Sbjct: 152 AVRKVFVTLYKQGLIYRDKRLVNWDPKLHTAISDLE 187



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +           ++ +  LV   RD    KMSK  G+
Sbjct: 487 TGFD-IIFFW-------VARMMMMGIHFMGDVPFKDIYIHALV---RDEKGQKMSKSKGN 535

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    ++D+ G D+VRF +
Sbjct: 536 VIDPLDLMDKYGCDAVRFTL 555


>gi|71894314|ref|YP_278422.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|90101534|sp|Q4A6B0|SYV_MYCS5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71851102|gb|AAZ43711.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 832

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 32/178 (17%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +Y  +        +I     N TG +H+GH   + + DT+      SGY+V         
Sbjct: 22  KYFIDHNLDKKPFSILLPPPNVTGKLHLGHALDSYIPDTIIRFKKLSGYDVL-------W 74

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
              ++   ++   +                        V  EL  +      +  +EK+L
Sbjct: 75  LPGMDHAGIATQSK------------------------VESELYKQNKLTRHDLGKEKFL 110

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
             V  +      K+ R   + L +  D         +     +  I   L  +GY+Y+
Sbjct: 111 AEVWKWKEIHE-KLFRQQWQTLGLALDYSNEAFTLSKEVNEKVIKIFVELYNRGYIYK 167


>gi|323702369|ref|ZP_08114034.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532675|gb|EGB22549.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 827

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +             Y         K     +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEAKWQQYWEKQNIYQVPDYSDRPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKNMQ 69

Query: 158 GYEV 161
           GY V
Sbjct: 70  GYHV 73


>gi|325109036|ref|YP_004270104.1| glutamyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969304|gb|ADY60082.1| glutamyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 527

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 84/278 (30%), Gaps = 30/278 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G  R A+     A      G  V R    + A  Q   L   +       
Sbjct: 9   APSPTGYMHIGGMRTALFNWLFAR--HHGGTFVLRIDDTDRARNQEEALGPILQAFRWLG 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  ++     G   G Y +       D     +             D++     +  R  
Sbjct: 67  LPWDEGP-EVGGPHGPYYQSERTGYVDACQKLISEG------KAFYDFTPPEQAQAERQQ 119

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG--YVYEGILPPPKSKTTQKCDMDR 306
            +     +         +R D     + +      G  YV   ++P          D+ R
Sbjct: 120 AEKEKRNYLN-------NRSDAELTAEQVQEKVAAGEKYVIRFLMPREAGAKVIVDDLVR 172

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            ++ F  T + D     +++ D +  Y   + A           ++I     +H      
Sbjct: 173 GRVEFDPTQMPDP---VIMRGDQTPLY---NFATVIDDAAMEITHVIR--AEEHLSNTPI 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              +  A+  ++ +   +      +   G   KMSKR 
Sbjct: 225 QALLYDALGYERPKFAHIPY----VAAPGTKEKMSKRK 258


>gi|304391660|ref|ZP_07373602.1| glutamyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295889|gb|EFL90247.1| glutamyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 473

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 104/310 (33%), Gaps = 44/310 (14%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
           TK  I   + +PTG +H+G  R A+    LA  +   G ++       D     +    +
Sbjct: 2   TKPVITRFAPSPTGFLHIGGARTALFNWLLARSL---GGKMLLRIEDTDRARSTDEAVDA 58

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           +         + D +    +      + V  EL  K       +   + L  +++ +   
Sbjct: 59  LLDGLTWLGLDWDGEPISQFSRADRHREVVDELLAK-GEAYPCYATPEELTEMREKARAE 117

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
                 D         D   +E       P  ++ +I             +  P+   T 
Sbjct: 118 KRPPRYD-----GRWRDRDPAEA------PEGVKPVI------------RIKSPQDGETV 154

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D+ + ++ F +  +    D  LL+SDGS TY    LA     ++    ++  V G DH
Sbjct: 155 VNDLVQGEVRFPNADLD---DLVLLRSDGSPTYM---LAVVVDDHDMDVSHI--VRGDDH 206

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS- 419
                R   +  A+     ++       + L       K+SKR G           +G  
Sbjct: 207 LTNAARQTIIFNAMGWNVPEMAH-----IPLIYGADGAKLSKRHGAI--GAEAYRAMGYL 259

Query: 420 -DSVRFMMLW 428
            D++R  ++ 
Sbjct: 260 PDALRNYLVR 269


>gi|288803812|ref|ZP_06409239.1| glutamate--tRNA ligase [Prevotella melaninogenica D18]
 gi|288333719|gb|EFC72167.1| glutamate--tRNA ligase [Prevotella melaninogenica D18]
          Length = 505

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 100/290 (34%), Gaps = 45/290 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR-----EYYINDAGAQINTL 177
           + +PTG +H+G  R A+     A       +      +  R     E YI D+   +   
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQHGGKLIFRIEDTDSNRFVPGAEEYILDSFDWLGI- 69

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
                       ++       G   G Y +   +++  KY ++LL   +  ++       
Sbjct: 70  -----------KFDEGVSF--GGEHGPYRQSERRDIYKKYVNQLLEAGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           + A  K I       N Q+D         R   +  ++ +++L   G  Y         +
Sbjct: 116 LDAKRKEIE------NFQYDAHTRLQ--MRNSLTMSKEEVESLIEDGQQYVVRFKIEPGE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R  +  +S ++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 EIHIKDMIRGDVCIKSDILD---DKVLFKSADELPTYH---LANIVDDHLMEISHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +++        L+ L  +G   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEESMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|270296793|ref|ZP_06202992.1| isoleucyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270272780|gb|EFA18643.1| isoleucyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|116871620|ref|YP_848401.1| glutamyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460672|sp|A0AF36|SYE_LISW6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|116740498|emb|CAK19618.1| glutamyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 491

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 99/307 (32%), Gaps = 41/307 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NVADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G Y     + + + L  +   E L +   K    
Sbjct: 61  QMKNL----KWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQQLLDEGLAY---KCYCT 113

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            ++   +   +   +++   + +      E                    QG+       
Sbjct: 114 EEELEAEREKQKANNEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRFK 160

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     ++
Sbjct: 161 VPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISHV 214

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +   G DH     +   +  A   +      +      L  +    K+SKR G  I    
Sbjct: 215 LR--GDDHISNTPKQILIYNAFGWEPPTFGHM-----TLIVNESRRKLSKRDGSIIQFIE 267

Query: 413 VVDEVGS 419
              ++G 
Sbjct: 268 QYRDLGY 274


>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123050340|sp|Q0VML5|SYC_ALCBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 460

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 104/347 (29%), Gaps = 45/347 (12%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                ++ +          +H+G+ R  VV D L  L+           Y N        
Sbjct: 18  PLDPNRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRL--------YPN-------- 61

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
               V+ R    +  +D  +      G  +  + +     ++ ++ +       P +   
Sbjct: 62  ---VVYARNITDI--DDKIIKAAADNGEAISTLTERFTQAFADDMASL--NAKTPSIIPK 114

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPK 295
           +   + ++I         Q    + E          +   ++++   G +    +     
Sbjct: 115 ATDHIPEMI---------QMIAILVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLA 165

Query: 296 SKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
               +  D  R      L   ST      D P  +    +    + +        +   +
Sbjct: 166 GARVEVADYKRHPGDFILWKPSTDEQPGWDSPWGRGRPGWHIECSAM------IHKHLGD 219

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +I + G          E   A         + +   L   Y +    KMSK  G+F  +R
Sbjct: 220 VIDIHGGGQDLIFPHHENEIAQ-GCCAHGTDYVRYWLHNGYINIDGEKMSKSLGNFRLVR 278

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYA 457
            ++ +   +++RF +L       L+F    +    K  + ++Y    
Sbjct: 279 DLLTQYHGETLRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLG 325


>gi|113969341|ref|YP_733134.1| leucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123029885|sp|Q0HLJ0|SYL_SHESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113884025|gb|ABI38077.1| leucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 859

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|71027023|ref|XP_763155.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350108|gb|EAN30872.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 691

 Score = 41.1 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457
           KMSK  G+ + L  ++ EVG +S R+ +L        ++FD  ++KE    +    V   
Sbjct: 480 KMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVMGSDVNFDQNQLKEMHNSDLADNVGNL 539

Query: 458 YARCRSIFRQAKD 470
             R  S+  +  +
Sbjct: 540 VHRLTSLVTKYNE 552


>gi|301170011|emb|CBW29615.1| methionyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 682

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREGIDFSEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNT 382


>gi|262374208|ref|ZP_06067484.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310766|gb|EEY91854.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 874

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S +   +     +   +      +G    I  +   P+G +H+GH R   +GD ++   
Sbjct: 12  ASAIEPQVQQDWDNRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFY 71

Query: 155 AFSG 158
              G
Sbjct: 72  RLKG 75


>gi|260911702|ref|ZP_05918280.1| isoleucyl-tRNA synthetase [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634178|gb|EEX52290.1| isoleucyl-tRNA synthetase [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 614

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 24/179 (13%)

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
           + I+   +S    K ++D   + F S  +             +  ++  + A    K   
Sbjct: 65  DDIVLVSESGKPMKREIDLIDVWFDSGAMPY-----------AQVHYPFENAELIDKRIA 113

Query: 348 GFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
              + I   G D   G+   L A+A  V +  A  NV+   LV    D    KMSK  G+
Sbjct: 114 FPADFINE-GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMSKHVGN 169

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
            +    ++++ G+D VR  ML      + L FD   V E  ++          F+  YA
Sbjct: 170 VVNPFEMMEKYGADPVRMYMLTNSEPWDNLKFDAESVDEIRRKLFGTLYNTYSFFALYA 228


>gi|224112529|ref|XP_002316221.1| predicted protein [Populus trichocarpa]
 gi|222865261|gb|EEF02392.1| predicted protein [Populus trichocarpa]
          Length = 596

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 31/161 (19%)

Query: 2   YLFADFSSRLKNYLK------EIDCKIKVEKKILDRIVIERPRDCAHG--H--LSTNAAM 51
           ++    S ++ N ++      +  C +++ K  + ++   + +    G      S+N A 
Sbjct: 164 HITNYLSEQVDNVIRTCSESGQFPCSVQLPKASVKKVSQAKRKLLVEGAEDLMYSSNIAF 223

Query: 52  ILSRPLGLD-----------------PLTIAELIVARIKIDPDVDSVFI-AGKGFINLYL 93
            ++  +                    P  IAE + A +    + + + I A  G IN Y 
Sbjct: 224 QIAATIRQARSIAKDASRSAEDNPLSPKIIAEKLAASLDQLANTNGLAIRACNGHINFYT 283

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134
           + + +     S +  G +       +    ++   S +P G
Sbjct: 284 ATTQVSSNEDSHIALGAQ---ESATERKDFSLRKSSVHPQG 321


>gi|255931483|ref|XP_002557298.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581917|emb|CAP80055.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 969

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS--ANPTGPMHVGHCRCAVVGDT 149
            L    L K   +   +     R+      K     +S    P+G +H+GH R   + D 
Sbjct: 43  RLDLPALDKKWQAKWENDRTSPRSTSDATQKPKSYILSMFPYPSGTLHMGHLRVYTISDV 102

Query: 150 LASLMAFSGYEV 161
           ++      G++V
Sbjct: 103 ISRFYKMRGHDV 114


>gi|114046568|ref|YP_737118.1| leucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123131668|sp|Q0HXU4|SYL_SHESR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113888010|gb|ABI42061.1| leucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 859

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|41615045|ref|NP_963543.1| valyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74580061|sp|Q74NF3|SYV_NANEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|40068769|gb|AAR39104.1| NEQ252 [Nanoarchaeum equitans Kin4-M]
          Length = 751

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 44/199 (22%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           Y  K +        +Y      K   + I+     P    H+G      + D +A     
Sbjct: 3   YNPKEIEQWYKENYKYFFGEGDK--ILIIDTPPPYPAPLWHIGAALSYALQDFIARGFRK 60

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            GY+V                                   PEG+        +  E  +K
Sbjct: 61  LGYKVI---------------------------------FPEGFDGNGIPIEMYLEKYEK 87

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PI 273
                 +   E+++   +   + +  + +   LK L +  D    E  ++  DP      
Sbjct: 88  I--PFGSIDREEYIKKCRQI-LDSWREKMDKILKDLLLSMDF---EHRYNTDDPEYRALT 141

Query: 274 RDIIDNLARQGYVYEGILP 292
           +     L  +G +YE   P
Sbjct: 142 QKTFAELWEKGLIYEAEYP 160


>gi|117919450|ref|YP_868642.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166231644|sp|A0KTW7|SYL_SHESA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117611782|gb|ABK47236.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 859

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|291320148|ref|YP_003515409.1| Isoleucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752480|emb|CBH40452.1| Isoleucyl tRNA synthetase (Isoleucine tRNAligase) [Mycoplasma
           agalactiae]
          Length = 892

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 88/238 (36%), Gaps = 25/238 (10%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           +++ ++   +   T          L    FR+     ++D   +  D   T  A ++   
Sbjct: 483 IFDYVIDLVEKYGTDIWWEKEADELLPEEFRNNGYTKEMDIMDVWFDSGTTSLAVEI--- 539

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
             K +  +D  +Y+ GSD   G+       + A + K     ++    V    D    KM
Sbjct: 540 DEKLKPPYD--LYLEGSDQYRGWFNSSLINSVAYTHKSPYKQIVSHGFV---LDSKGEKM 594

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK-----ENPVFYV- 454
           SK  G+ +    V+ + G+D +R  +   + +  ++     + + S+      N + ++ 
Sbjct: 595 SKSKGNVVDPLKVIKKYGADILRLWVANAEYTNDVNISDEIINQNSEIYRKIRNTIKFLL 654

Query: 455 --QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                Y    S+ R     +   + +     V     E++ S +  I  + +Y  V+E
Sbjct: 655 GNLNGYEYDESVKRTGVHQYIYNELESIKEKVYKAYDEYNFSSV--IKTINKY--VVE 708


>gi|269215567|ref|ZP_06159421.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131054|gb|EEZ62129.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 952

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 31/238 (13%)

Query: 343 CKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            +     D  +Y+ GSD   G+ +                 V+ C       D    KMS
Sbjct: 565 DRLHWPAD--LYLEGSDQHRGWFQSSLLCGVGAYGSAPYKAVMCCGF---TVDEHGEKMS 619

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYAR 460
           K  G+ I  + V D  G+D +R  +        +D      + +++ +        AY R
Sbjct: 620 KSKGNGIDPKEVTDTYGADVLRLWV--SSTDYSVDVSIGDTILKRTSD--------AYRR 669

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
            R+ FR         D       +   +     + L+L   LAE    +  A      ++
Sbjct: 670 FRNTFRFLLANLDGFDDATDAVELADMDPIDVWAMLRLSDVLAE----VGRAYDEYHFHQ 725

Query: 521 LAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
           +   LYD + +     +        ++    +    +  R     +V +++ + L ++
Sbjct: 726 VFRTLYDYVVTDLSAVY-----MDVVKDRLYSEAPDSRAR----RSVQTVLMNILEVL 774


>gi|260459472|ref|ZP_05807727.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259035026|gb|EEW36282.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 517

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 100/326 (30%), Gaps = 38/326 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D LA      G +V      ++ G ++   A       ++    
Sbjct: 15  PNGKPHIGHAYEVIATDALARFQRLDGKQVFFLTGTDEHGIKMLQTAKREGISARELADR 74

Query: 192 NDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-----VKDYSVQAM 241
           N +D              +++   +       +          +             +A 
Sbjct: 75  NSADFKRMAAALNASNDDFIRTTEERHYASSQAIWKAMDANGDIYKGGYAGWYSVRDEAY 134

Query: 242 MKIIRDDLKALNIQH-----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                 +++A N+++      +   E++ +    S  +D +  L      + G       
Sbjct: 135 YGEEETEVRADNVRYGPQGTPVEWVEEESYFFRLSAYQDKLIALYESQPDFIGPAERRNE 194

Query: 297 KTTQKCDMDRKQLLFRST------MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--- 347
             +      +   + R+T      + GD+     +  D    Y    + Y   K E+   
Sbjct: 195 VMSFVKSGLKDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITG-VGYPDEKDEKWRF 253

Query: 348 -GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
              D  I  +G D    + R  AV   A  +S        +        R     KMSK 
Sbjct: 254 WPADAHI--IGKD----IVRFHAVYWPAFLMSAGIPLPKRVFGHGFLFNRG---EKMSKS 304

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWR 429
            G+ I    +V+  G D VR+  L  
Sbjct: 305 VGNVIDPFTMVEHYGLDQVRYFFLRE 330


>gi|255263511|ref|ZP_05342853.1| valyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105846|gb|EET48520.1| valyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 974

 Score = 41.1 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 355 VMGSDHSGYV---KRLEAVAAAVSEKKAQINVLLCELVRL---YRDGMPIKMSKRAGDFI 408
           V GSD   +    + +    A +++ K     +  + + L    RD    KMSK  G+ I
Sbjct: 569 VTGSD-ILFFWVARMMMMQLAMLTDDKPAAERIPFDTIYLHGLVRDAKGKKMSKSTGNVI 627

Query: 409 TLRHVVDEVGSDSVRF 424
               ++DE G+D++RF
Sbjct: 628 DPLDIIDEFGADALRF 643


>gi|329729986|gb|EGG66377.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 916

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 72/228 (31%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P  S      + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSSNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|328698635|ref|XP_003240691.1| PREDICTED: valyl-tRNA synthetase-like [Acyrthosiphon pisum]
          Length = 990

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 32/173 (18%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174
           N        +I     N TG +H+GH   A + D +      SG +V      + AG   
Sbjct: 67  NNTDNRKTFSIILPPPNITGSLHLGHALTATIQDIIVRWYRMSGVDVVWVPGTDHAG--- 123

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
               ++     ++ L+             V  +++G      ++ E++ + E K      
Sbjct: 124 ----IATQVVVEKKLFAE---------KNVNRQNIG---KKAFNQEVIKWKESK------ 161

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
                  + IIR+ LK L +  D               + + I  L     +Y
Sbjct: 162 -------ISIIRNQLKNLGVTLDWNRETFTMDEKQTRAVNEAIIRLFDSKLLY 207


>gi|313232437|emb|CBY24105.1| unnamed protein product [Oikopleura dioica]
          Length = 362

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 27/189 (14%)

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           + R+   EV    +R  +L  + S+ ++ D   V+ +       ++ Y YAR R +    
Sbjct: 189 SQRNFAAEV-ESLIRLAVLRVRLSKRVEDDPDLVQLE-------FLLYQYARARHVSATM 240

Query: 469 KDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA----F 523
           ++   + +D +      I +       EL L +  A++   ++    A++   L      
Sbjct: 241 ENKMNEKIDIEKIDWKDIHEY----EEELALSISTADF--AVKRFVQARDVS-LCSGFVD 293

Query: 524 YLYDLASVFHGHWSHGRENPRLR-------FVQANNRKLTMMRLQLVHAVASIINSGLNI 576
            +  L+  F   +S  R  P           +  + ++ ++ RL LV    + ++  L++
Sbjct: 294 QIIRLSRSFSKFYSKCRVVPGCSGFHGDKFELIEDAKEESLRRLLLVEMFVNRMDVMLSL 353

Query: 577 IGVESPNEM 585
           + V   + M
Sbjct: 354 LAVSPLHSM 362


>gi|326792707|ref|YP_004310528.1| isoleucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326543471|gb|ADZ85330.1| isoleucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 1043

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 12/110 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + +K    NV++   V    D   +KMSK  G+ +    V+D  
Sbjct: 557 DQTRGWFYTLMAISTLIFDKAPYKNVIILGHVG---DKDGVKMSKHKGNVVDPWSVLDVQ 613

Query: 418 GSDSVRFMMLWRKNSEL-LDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           G+D+VR+         L   F    V E  ++          FYV YA  
Sbjct: 614 GADAVRWYFYSASAPWLPSRFAGENVSESQRKFMGTFWNTYAFYVLYANI 663


>gi|257784644|ref|YP_003179861.1| isoleucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473151|gb|ACV51270.1| isoleucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 932

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 79/223 (35%), Gaps = 28/223 (12%)

Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIK 399
           K +    F   +Y+ GSD   G+   + ++  +V     A    ++ +   L  DG   K
Sbjct: 564 KHRPNLKFPADMYLEGSDQHRGWF--MSSLMTSVGAYGVAPYKSVVSQGFTL--DGQGRK 619

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    V  E G+D +R  +     S  +  D   +  Q  +        AY 
Sbjct: 620 MSKSLGNVIDPNAVCAERGADVLRLWVASVDTSTDVPCD-DAILSQVGD--------AYR 670

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519
           R R+  R    +  +L+    P       ++ +  +  ++  + E    +  A       
Sbjct: 671 RFRNTLR---FLLGELEGQFDPATDAVAVADLEEYDRLVLARMCEVHAAVTEAYEGYRFN 727

Query: 520 ----KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558
                L  Y+ +L+   +G+ +  ++        A N      
Sbjct: 728 NVFRTLYDYIIELS---NGYLNATKDRMYC---DAANSATRRS 764


>gi|116515156|ref|YP_802785.1| hypothetical protein BCc_223 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257010|gb|ABJ90692.1| valyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 951

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 53/205 (25%), Gaps = 36/205 (17%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE-VTR 163
              +   + +N   KG    I     N TG +H+GH     + D L        Y+ + +
Sbjct: 18  CNDNNFFFHKNYYFKGKSFCIMVPPPNITGSLHMGHAFQQTIMDVLIR------YKHMCK 71

Query: 164 EYYINDAGA-QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
              +   G          V  RY   L + +      Y    ++K +             
Sbjct: 72  RNTLLQMGTDHAGIATQMVVERY---LLHKEGKNKNLYTRKEFVKKILD----------- 117

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
                      K  S   M   I    K L +  D   +           +  +   L  
Sbjct: 118 ----------WKKKSELIMFNQI----KRLGLLIDWKKTRFTLDSNFSIAVNKVFIKLYE 163

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRK 307
            G +Y            +    D +
Sbjct: 164 DGLIYRSKKLVYWDTQLKTVISDLE 188


>gi|153952449|ref|YP_001398103.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|229470593|sp|A7H3M3|SYE2_CAMJD RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|152939895|gb|ABS44636.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 431

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 123/381 (32%), Gaps = 53/381 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+                    YI      ++ +         + 
Sbjct: 5   APSPTGDMHIGNLRAAIF------------------NYICARQKNMDFILRIEDTDKSRN 46

Query: 189 LYNNDSDLPEGY-YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           +   + ++ E     G+  +H   +      SE L F  +  L +V +   +A      +
Sbjct: 47  IKGKEEEIKEILNLFGISWQHYYIQ------SENLKFHRQMALKLVSEK--KAFACFCTE 98

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +      +      +   + G    + DI      + +V     P    K T   D  + 
Sbjct: 99  EELEAKKELAKKQGKAYRYDGTCEKLADIDVLECEKSFVIRLKKPTHTMKFT---DFIKG 155

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +L F    +       ++++D + TY   + A            +I   G DH     + 
Sbjct: 156 ELSFEPENIDSF---VIMRTDKTPTY---NFACAVDDMLENVTCIIR--GEDHVSNTPKQ 207

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E + A++   KA     L  ++        +KMSKR         +   +   ++   ++
Sbjct: 208 EHIRASLGYDKAMTYAHLPIILNE----EGVKMSKREAHSSVKWLLESGILPSAITNYLI 263

Query: 428 WRKNSELLD----------FDFCKVKEQ-SKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
              N    +          FD  KV +  ++ +    +Q      + I     +   DL+
Sbjct: 264 MLGNKTPYEIFTLEEAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLN 323

Query: 477 FDLFPRNVIPQESEFDTSELQ 497
            DL        +      EL+
Sbjct: 324 KDLAQLAKFYTQEASTIKELK 344


>gi|71746704|ref|XP_822407.1| methionyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70832075|gb|EAN77579.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 773

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 57/421 (13%), Positives = 125/421 (29%), Gaps = 67/421 (15%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH    ++ D +       G  V      ++ G ++   A        
Sbjct: 250 YVNAAP----HIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQVSPY 305

Query: 187 QALYNNDSDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEK-WLPIVKDYSVQAM 241
                   +  + +    Y   Y      E       EL    E+K  + + +     ++
Sbjct: 306 DFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEGWYSI 365

Query: 242 MKIIRDDLKAL--NIQHD--------------IFISEDDFHRGDPSPIRDIIDNLARQ-G 284
                   + +   +  D               ++SE+++     +    +++      G
Sbjct: 366 SDESFLTPQNITDGVDKDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERLLEWYHANPG 425

Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-------GDDVDRPLLKSDGSYTYFAA- 336
            +          +  +K   D      + T+        G+      +  D    Y    
Sbjct: 426 CIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLDALTNYLTGS 485

Query: 337 ----DLAYFKCKYERGFDNM------IYVMGSD----HSGYVKRLEAVAAAVSEKKAQIN 382
               D +  +      F  +      ++V+G D    H+ Y     A   +      +  
Sbjct: 486 RLRVDESGKEVSLADDFSELERFPADVHVIGKDILKFHAIY---WPAFLLSAGLPLPKKI 542

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCK 441
           V      +  +     K+SK  G+        +E G D++++ +L     S+  D+    
Sbjct: 543 VAHGWWTKDRK-----KISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDKN 597

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +  +        +     RC S          +++ +        +E   D S +QLI  
Sbjct: 598 MIARLNGELADTLGNLVMRCTS-------AKINVNGEWPSPAAYTEE---DESLIQLIKD 647

Query: 502 L 502
           L
Sbjct: 648 L 648


>gi|288930704|ref|YP_003434764.1| leucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892952|gb|ADC64489.1| leucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 929

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 10/161 (6%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                      +       K  I        G +H GH R   +GD +A      GY V 
Sbjct: 10  WQKKWEESRIFQADPDDREKFFITIPYPYLNGNLHAGHTRTFTIGDAVARYKRMLGYNVL 69

Query: 163 --REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPG----VYLKHVGKELA 214
               +++   G  I  LA  +  R ++   +Y    ++PE           +     + A
Sbjct: 70  FPMGFHV--TGTPIIGLAELIQKRDERTIKVYTQYHNVPEEILLTLTTPERIVEYFSKEA 127

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +K    +    + +      D   Q  ++     LK   + 
Sbjct: 128 EKAMKMIGYSIDWRRKFTTMDECYQKFIEWQYWRLKEKGLI 168


>gi|239831997|ref|ZP_04680326.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824264|gb|EEQ95832.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 525

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 133/423 (31%), Gaps = 47/423 (11%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
           I    K  I    A P G  H+GH    +  D +A     +G +V      ++ G ++  
Sbjct: 12  IMSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQ 71

Query: 177 LAL--------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
            A               + F +    L +++ D         Y        A   + ++ 
Sbjct: 72  SARKEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMADNGDIY 131

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD--IFISEDDFHRGDPSPIRDIIDNL 280
                 W  +  +         +R+D      Q     ++ E+ +     S    ++D  
Sbjct: 132 KGGYAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSSYQDRLLDLY 191

Query: 281 ARQ-GYVY----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            +  G++        +        +   + R    +   + GD+     +  D    Y  
Sbjct: 192 EQNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYIT 251

Query: 336 ----ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCEL 388
                D    K  Y     ++I   G D    + R  AV   A  +S        +    
Sbjct: 252 ALGYPDTTDGKWGYWPADAHII---GKD----ISRFHAVYWPAFLMSAGIPLPKRVFAHG 304

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
               R     KMSK  G+ I    +V+  G D +R+  L R+     D  +      ++ 
Sbjct: 305 FLFNRG---EKMSKSLGNVIDPFGLVERYGLDQLRYF-LMREVPFGQDGSYSHDAIVNRT 360

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ-ESEFDTSELQL---IV 500
           N            RS+   AK+    +    +F    + ++ Q E+  DT+   +    +
Sbjct: 361 NADLANDLGNLAQRSLSMIAKNCEGKVPVPGEFSEADKAILDQAEAALDTARKAMDDQAL 420

Query: 501 HLA 503
           HLA
Sbjct: 421 HLA 423


>gi|163841986|ref|YP_001626391.1| valyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162955462|gb|ABY24977.1| valyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 873

 Score = 41.1 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 33/190 (17%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    V+ E G+D+VR+     K      ++  ++K          
Sbjct: 593 DPDRKKMSKSKGNVVVPDAVLHEFGADAVRYWAASAKLGADTAYEIAQIKIGR------- 645

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 R       A     +L                +  +  L+  LA    V++ AT
Sbjct: 646 ------RLAIKLLNASKFVLNLGATESNVVNSADPVLTNPLDKALLAQLA---DVVDQAT 696

Query: 514 IAQEPYKLAFYLYDLASV-------FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            A +        YD A         F        E  + R   A         L    A+
Sbjct: 697 KAFD-------SYDYAKALQLTESFFWSFTDDYVELIKDRAYGAAGDAEKASVLA---AL 746

Query: 567 ASIINSGLNI 576
           A+ +++ L +
Sbjct: 747 ATTLDALLRL 756


>gi|307941705|ref|ZP_07657060.1| isoleucine--tRNA ligase [Roseibium sp. TrichSKD4]
 gi|307775313|gb|EFO34519.1| isoleucine--tRNA ligase [Roseibium sp. TrichSKD4]
          Length = 986

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 33/167 (19%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH     + D +   M   GY+     Y+         +   +  +Y+   
Sbjct: 63  PYANGNIHIGHALNKTLKDMVTRSMQMLGYDS---NYVPGWDCHGLPIEWKIEEQYRSKG 119

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P                              ++    +D++ +  + + R++ 
Sbjct: 120 KNKD-EVPIN----------------------------EFRQECRDFA-EHWINVQREEF 149

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           K L I+ D             + I + +   A  G +Y G  P   S
Sbjct: 150 KRLGIEGDWDNPYLTMRFESEAIIANELMKFAMSGQLYRGSKPVMWS 196


>gi|255009325|ref|ZP_05281451.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147078|ref|ZP_07809271.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135845|gb|EFR53205.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 1141

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 649 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   ++E  ++          F+  YA
Sbjct: 706 KYGSDPLRWYMITNSSPWDNLKFDVEGIEEVRRKFFGTLYNTYSFFALYA 755


>gi|261402721|ref|YP_003246945.1| valyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369714|gb|ACX72463.1| valyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 878

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 66/187 (35%), Gaps = 19/187 (10%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ KK    +++  +V    DG   KMSK  G+ +    ++ + G+D++R         
Sbjct: 504 ALTNKKPWEEIVINGMV-FGEDG--HKMSKSRGNVVEPDEIISKYGADALRLWASNSVVG 560

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F + +            + YAY   R  +   +     +  D+      P E + +
Sbjct: 561 DDVQFLWKE------------IDYAYRFLRKFWNACRFAKMHISDDIIDELKKPVEIK-N 607

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             +L ++  L      ++          +   +Y    V+H    +  E  + R    + 
Sbjct: 608 PVDLWILSKLQRLIERVDKDLENYRFNTIVE-IYKF--VWHEFCDNYIEMVKYRLYGDDE 664

Query: 553 RKLTMMR 559
                 R
Sbjct: 665 EAKKEAR 671


>gi|253741581|gb|EES98449.1| Valine-tRNA ligase [Giardia intestinalis ATCC 50581]
          Length = 1217

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK------GTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +PS + K       +   +  +            K  +     N TG +H+GH     + 
Sbjct: 62  NPSVIEKNWYDWWEAAGFFSPDTQKNVRSKDPRCKFTLLIPPPNVTGSLHIGHALTNSIQ 121

Query: 148 DTLASLMAFSGYEVTREYYINDAGA 172
           D L       GY       ++ AG 
Sbjct: 122 DALVRWYRMMGYRTLYLPGLDHAGI 146


>gi|226952885|ref|ZP_03823349.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836396|gb|EEH68779.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 874

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S +   +     +   +      +G    I  +   P+G +H+GH R   +GD ++   
Sbjct: 12  ASAIEPQVQQDWDNRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFY 71

Query: 155 AFSG 158
              G
Sbjct: 72  RLKG 75


>gi|189460654|ref|ZP_03009439.1| hypothetical protein BACCOP_01296 [Bacteroides coprocola DSM 17136]
 gi|189432613|gb|EDV01598.1| hypothetical protein BACCOP_01296 [Bacteroides coprocola DSM 17136]
          Length = 505

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 105/290 (36%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++      D  +  G   G Y +   +++  KY + LL+            + 
Sbjct: 57  EEYIIESFKWLGIKFDEGVSFGGNYGPYRQSERRDIYKKYVNVLLDNG-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               ++  R ++     Q+D   S  +  R   +  ++ +D L  +G  Y        ++
Sbjct: 112 TPEELEAKRKEVPNF--QYD--ASTRNSMRNSLTMPKEEVDKLIAEGTQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVHDIIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+ L  DG   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPEFAHLPLL-LKPDGNG-KLSKRDGD 267


>gi|86751289|ref|YP_487785.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86574317|gb|ABD08874.1| Isoleucyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 1054

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 25/172 (14%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG------DDVDRPLLKSDGSYTYFAAD-- 337
           V   I    +++       +  +  F  +         DD+      S  ++ +   D  
Sbjct: 599 VNARIAEAFEAEGADAWYEEGARERFLGSRANEEWQKVDDICDVWFDSGSTHAFVLEDPV 658

Query: 338 ----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRL 391
               LA  + K + G D ++Y+ GSD   G+      +  +   + +A  +V+L     L
Sbjct: 659 HFPGLAGIRRKVDGGADTVMYLEGSDQHRGWFHSS--LLESCGTRGRAPYDVVLTHGFTL 716

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLD 436
              G   KMSK  G+      V+   G+D +R       +    R   E+L 
Sbjct: 717 DEQGR--KMSKSLGNTTDPAKVIASSGADILRLWVCATDYADDQRIGPEILK 766


>gi|332140401|ref|YP_004426139.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550423|gb|AEA97141.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 939

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 72/239 (30%), Gaps = 26/239 (10%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADL 338
               + E +    +SK  Q         L  S +   D       +    G   YF  D 
Sbjct: 492 ESSALMEKVALEVESKGIQAWWDLDDAELLGSDLDNYDKVTDTLDVWFDSGVTHYFVVD- 550

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +      +Y+ GSD   G+       + A+        VL         D   
Sbjct: 551 ----RRDDIPASADLYLEGSDQHRGWFMSSLMSSTAMHGHAPYKEVLTHGF---TVDAHG 603

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ +  + V +++G+D +R  +        +      +K  +          A
Sbjct: 604 RKMSKSVGNVVAPQEVTNKLGADILRLWVASTDYRGEIAVSDEILKRAAD---------A 654

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
           Y R R+  R     F   + + F       E+E    +  ++         +  A    
Sbjct: 655 YRRVRNTSR-----FLLANLNGFNVEDAVAENEMVALDRWIVARAKALQEELIEAYEKY 708


>gi|34762946|ref|ZP_00143926.1| Glutamyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887407|gb|EAA24497.1| Glutamyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 449

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 29/229 (12%)

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +  ++ W         D     G   G Y +    +L  KY+ EL+      +      
Sbjct: 1   MIFDALKWLDLNYSEGPDV----GGDYGPYRQSERFDLYGKYAKELVEKGG-AYYCFCDH 55

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
             ++ + +  +     L   +D         + +       I+   + G  Y   L  P 
Sbjct: 56  ERLENLRERQKAM--GLPPGYDGHC--RSLSKEE-------IEEKLKAGVPYVIRLKMPY 104

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
              T   D  R  ++F ++ +    D+ LLK+DG  TY    LA     +  G  ++I  
Sbjct: 105 EGETVIHDRLRGDVVFENSKID---DQVLLKADGYPTYH---LANIVDDHLMGITHVIR- 157

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              +      +   +  A   +  +   +      L R+    K+SKR 
Sbjct: 158 -AEEWIPSTPKHIQLYKAFGWEAPEFIHM-----PLLRNDDRSKISKRK 200


>gi|329954923|ref|ZP_08295940.1| isoleucine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328527027|gb|EGF54038.1| isoleucine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 1162

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSISYKAVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   V+E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYA 776


>gi|281422275|ref|ZP_06253274.1| glutamate--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403780|gb|EFB34460.1| glutamate--tRNA ligase [Prevotella copri DSM 18205]
          Length = 505

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 97/292 (33%), Gaps = 28/292 (9%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MADRKVRVRF-APSPTGALHIGGVRTALYNYLFAR--QHGGELVFR---IEDTDSHRFVP 54

Query: 178 ALSVFWRYQQALYNN--DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
               +            D  +  G   G Y +   +++  +Y  +LL+            
Sbjct: 55  GAEEYILESFKWLGIQFDEGVSFGGEHGPYRQSERRDIYKQYVQQLLDND-----KAYIA 109

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +     ++  R +++    Q+D         R   +  ++ +D L   G  Y        
Sbjct: 110 FDTPEELEAKRAEIQNF--QYDAHTRMQ--MRNSLTLSKEEVDKLIADGKQYTVRFKIEP 165

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIY 354
            +     DM R  +   S ++    D+ L KS D   TY    LA     +     ++I 
Sbjct: 166 GQEIHVNDMIRGDVKVMSDILD---DKVLYKSADELPTYH---LANIVDDHLMEISHVIR 219

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 220 --GEEWLPSAPLHVLLYKAFGWEDTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|162139845|ref|YP_318075.2| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 544

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 102/331 (30%), Gaps = 48/331 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-------NTLALSVFWR 184
           P G  H+GH   A+  D LA      G +V      ++ G ++       N  AL +  R
Sbjct: 44  PNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQRENISALELATR 103

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
             + L   D  L   +    +++                      + +    S  +    
Sbjct: 104 NAELLRKLDEALDISFDR--FIRTSESAHHRSVQDIWKRMAGNGDIYL----SNYSGWYS 157

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEGILPPPKSKTTQKC 302
           +RD  +A   + +  + ED+  RG      + ++  +   +   YE  L           
Sbjct: 158 VRD--EAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEPDFI 215

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKS--------------------DGSYTYFA----ADL 338
             D ++    S + G   D  + ++                    D    Y       D 
Sbjct: 216 GPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGFPDE 275

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
                ++    D  I+++G D    + R  AV        A I +        +      
Sbjct: 276 DESNWRF-WPAD--IHIIGKD----IIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGE 328

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           KMSK  G+ +    +  + G D +R+  L  
Sbjct: 329 KMSKSVGNVVDPFSLAAQYGVDQMRYFFLRE 359


>gi|147921041|ref|YP_685149.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121685571|sp|Q0W720|SYI_UNCMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110620545|emb|CAJ35823.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 1104

 Score = 41.1 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 72/197 (36%), Gaps = 29/197 (14%)

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A  V   KA  N +      L   G   KMSK  G+ +    VV+++G+D++R  +L + 
Sbjct: 618 AGMVGFGKAPYNGVCMHGFTLDETGK--KMSKSLGNVVAPEDVVEKLGADTLRLYVLSQN 675

Query: 431 NS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489
              E L F + +    ++   +F+  Y +     +  +         FD     +   + 
Sbjct: 676 APWEDLSFSWEECGNINRAINIFWNVYRFPLPYMVLDK---------FDPAKVTLESVKG 726

Query: 490 EFDTSELQLIVHLAEYPRVIENA---TIAQEPYK-----LAFYLYDLASVFHGHWSHGRE 541
                +  ++  L     VI++        E ++     ++F L DL       +   + 
Sbjct: 727 SLRVEDRWILSKLQ---AVIKDVDTYMATYELHRATRSIISFILEDL----SRWY--VQL 777

Query: 542 NPRLRFVQANNRKLTMM 558
                +V+A++      
Sbjct: 778 ARERTWVEADDPDKLAA 794


>gi|326382834|ref|ZP_08204524.1| valyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198424|gb|EGD55608.1| valyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 891

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 39/214 (18%)

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A   + + A++      L  L RD    KMSK  G+ I     VD  G+D++RF +    
Sbjct: 515 AGGFAGRDARVPFHDVFLHGLVRDDHGRKMSKSKGNGIDPLDWVDRFGADALRFTLAR-- 572

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                             NP   +    +  +S    A  +F    F L    V+     
Sbjct: 573 ----------------GANPGSDISVGESHAQSSRNFATKLFNATKFALMNGAVVADLPP 616

Query: 491 FDTSELQLIVH--LAEYPRVIENA---TIAQEPYKLAFYLYDLASVFHGHWSH-GRENPR 544
            D  EL +     L+    V+ +      + E  K         +++H  W         
Sbjct: 617 RD--ELTVADRWILSRLDEVLADVDAGFDSYEFSKACE------ALYHFAWDEVCDWYLE 668

Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLN-II 577
           L  VQ         R       A+++ + L+ ++
Sbjct: 669 LSKVQVAEGGERADR------TAAVLGTVLDKLL 696


>gi|312601590|gb|ADQ90845.1| Leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 790

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GY-----VKRLEAVAAAVSEK 377
           +LK    Y    + +AY K K     D  +Y+ G +H+ G+             A +   
Sbjct: 486 ILKEKDKYLPLDSKIAYDKFKKWLPVD--LYIGGQEHAVGHLIYSRFWHRVLFDAGIVPN 543

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                 ++ + + L  DG   KMSK  G+ I    ++D+ G+D++R  ++
Sbjct: 544 SEPFQKIIHQGMLLGSDGQ--KMSKSKGNTINPTEMIDKFGADTIRIFLM 591


>gi|156973531|ref|YP_001444438.1| leucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166231652|sp|A7MY86|SYL_VIBHB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156525125|gb|ABU70211.1| hypothetical protein VIBHAR_01222 [Vibrio harveyi ATCC BAA-1116]
          Length = 862

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  L + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDLEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|85058392|ref|YP_454094.1| isoleucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123766475|sp|Q2NVY6|SYI_SODGM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84778912|dbj|BAE73689.1| isoleucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 938

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 26/182 (14%)

Query: 296 SKTTQKCDMDRKQLLFR---STMVGDDV-------DRPLLKSDGSYTYFAADLAYFKCKY 345
               Q+ + D  Q  +    + ++GDD        D   +  D   T+ +  +   + ++
Sbjct: 494 ESVAQRVEQDGIQAWWDLDPAEILGDDAAHYHKVPDTLDVWFDSGSTHSS--IVAVRPEF 551

Query: 346 ERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           E    +M Y+ GSD   G+      ++ A+  K     VL         DG   KMSK  
Sbjct: 552 EGHAPDM-YLEGSDQHRGWFMSSLMISTAMHGKAPYRQVLTHGF---TVDGQGRKMSKSV 607

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ ++ + V+D++G+D +R  +     +  +     ++ ++S +        AY R R+ 
Sbjct: 608 GNVVSPQQVMDKLGADILRLWVASTDYTGEMAVS-DEILKRSAD--------AYRRIRNT 658

Query: 465 FR 466
            R
Sbjct: 659 AR 660


>gi|315608285|ref|ZP_07883275.1| isoleucine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250066|gb|EFU30065.1| isoleucine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 1204

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 108/344 (31%), Gaps = 57/344 (16%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ ++         G       +EL D+    +     
Sbjct: 566 LNDW-----NLSRSRFWGTPLPVWRDEE-------RGEKCIGSLQELYDEIEKSVAAGVM 613

Query: 227 EKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNLAR 282
                  K +     +     + DL    + + + ++E     +R       D+ID    
Sbjct: 614 SGNPLKEKGFVPGDYSQENYDKIDLHRPYVDNIVLVNESGKPMYRET-----DLIDVWFD 668

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
            G +    L  P     +      +Q +  S   G  +      +D              
Sbjct: 669 SGSMPYAQLHYPFEGEMKHGTEADRQEMVESRYNGMPIPPKFYPAD-------------- 714

Query: 343 CKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
                     I   G D   G+   L A+A  V    A  NV+   LV    D    KMS
Sbjct: 715 ---------FINE-GVDQTRGWFFTLHAIATMVFGSVAFKNVISTGLV---LDAKGNKMS 761

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFY 453
           K  G+      ++ + G+D VRF M+      + L FD   V E  ++          F+
Sbjct: 762 KHVGNVTDPFEMIGKYGADPVRFYMMTNSEPWDNLKFDPNGVDEVRRKFFGTLYNTYSFF 821

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             YA            D+    + D +  + +    +   +EL+
Sbjct: 822 ALYANVDNFDPEASQVDLAKRPEIDRWILSCLSTLVKGVETELE 865


>gi|210615927|ref|ZP_03290850.1| hypothetical protein CLONEX_03069 [Clostridium nexile DSM 1787]
 gi|210150020|gb|EEA81029.1| hypothetical protein CLONEX_03069 [Clostridium nexile DSM 1787]
          Length = 485

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 110/299 (36%), Gaps = 48/299 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E ++         L +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEDGDFLLRI-----EDTDQERFVE------GALEI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G   G Y++   ++  L  KY+ +L+   +  +        
Sbjct: 58  IYRTLEKTGLIHDEGPDKDGG-VGPYVQSERQQMGLYLKYAKQLIEQGD-AYYCFCDKER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++++   + +    + +     +             ++ I+     G  Y   +  P   
Sbjct: 116 LESLKTEVTEGGAEIVVYDKHCLHLS----------KEEIEANLAAGKPYVIRINMPTEG 165

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           TT   D     +   +  +    D  L+KSDG  TY   + A     + +G  ++  V G
Sbjct: 166 TTTFHDEIYGDITVPNAELD---DMILIKSDGYPTY---NFANVIDDHLQGITHV--VRG 217

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +++     +   +  A   +      + C L+    D    K+SKR G   +   ++++
Sbjct: 218 NEYLSSAPKYNRLYEAFGWEVP--TYVHCPLIT---DETHKKLSKRCGHS-SYEDLIEQ 270


>gi|126728331|ref|ZP_01744147.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126711296|gb|EBA10346.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 851

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +           + +     G   K  +  +   P+G +H+GH R   +GD +A
Sbjct: 3   RYDPASIEPKWQKAWEEALTFRATREGDKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIA 62

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 63  RYKKQNGFNV 72


>gi|56698255|ref|YP_168628.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|60390660|sp|Q5LMY0|SYL_SILPO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56679992|gb|AAV96658.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 852

 Score = 41.1 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   +GI        K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQEAWDKAGIFRAARTADKPKYYVLEMF-PYPSGRIHIGHVRNYTMGDVIARYKLSNG 69

Query: 159 YEV 161
           + V
Sbjct: 70  FNV 72


>gi|307109913|gb|EFN58150.1| hypothetical protein CHLNCDRAFT_141931 [Chlorella variabilis]
          Length = 1150

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 86  KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
           KG++     P  +             +  +L        I     N TG +H+GH     
Sbjct: 335 KGYV-----PKAVETAWYEWWQQRGFFKPDLNSDKPPFVIVIPPPNVTGSLHIGHALTNA 389

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           + DT+      SGY        + AG    T+      R Q    ++     EG+   V 
Sbjct: 390 IEDTVVRWRRMSGYNTLWVPGTDHAGIATQTVVEKKIAREQGKTRHDIGR--EGFLAEV- 446

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                 E   +Y   + +        +  D     M + +   +K  + +   +  +   
Sbjct: 447 -----WEWVGEYGDRICSQLRRMGSSVDWDRKTFTMDENLSAAVKEADNRLVNWCCKLRT 501

Query: 266 HRGDPSPIRDIIDNLARQGY 285
              D      +++ L  +G 
Sbjct: 502 AVSDIEARVTVVEYLKERGL 521


>gi|269961555|ref|ZP_06175917.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833596|gb|EEZ87693.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 857

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  L + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDLEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|254477127|ref|ZP_05090513.1| isoleucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031370|gb|EEB72205.1| isoleucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 976

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 56/200 (28%), Gaps = 33/200 (16%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           + +  +   +       +    +     +        G +H+GH     + D +      
Sbjct: 39  WAQIGVYDKLREKAAAAKGTDAERKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQM 98

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
            G++     Y+         +   +  +Y++   N D        P V  +   +  AD+
Sbjct: 99  LGFDAR---YVPGWDCHGLPIEWKIEEQYRKKGKNKDE------VPVVDFRQECRAFADE 149

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                                    + I R++ K L I  +        +    + I D 
Sbjct: 150 ------------------------WVGIQREEFKRLGITGNWDDPYLTMNYHAEAVIADE 185

Query: 277 IDNLARQGYVYEGILPPPKS 296
                  G +Y+G  P   S
Sbjct: 186 FMKFLMNGTLYQGSKPVMWS 205


>gi|198464541|ref|XP_001353264.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
 gi|198149764|gb|EAL30767.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
          Length = 919

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 115/333 (34%), Gaps = 49/333 (14%)

Query: 250 KALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +A  +   +  S        + + I  +   L  QG +        +     +   D   
Sbjct: 496 RAWGVPIPVLYSRKSGQVVLNAALIEHLCSLLRSQGSMDFWWSRSLEDLLPPQIAADLGY 555

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRL 367
            + +  + G D+      S  +++           K E+  D  +Y+ G D  +G+ +  
Sbjct: 556 EV-KDLVKGSDILDIWFDSGSTWS--------AVLKKEQVAD--LYLEGYDQFTGWFQSS 604

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              + A  +      + +        D    KMSK  G+ I+ + +  + G+D++R+ + 
Sbjct: 605 LLTSIAARDCAPYKALFVHGF---TVDEKGHKMSKSLGNVISPKQITKKYGTDALRWWVA 661

Query: 428 WRKNSELLDFDFCKVKEQSKEN------PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481
                        K+ +++ EN       + Y++        I  + ++   +L+  +  
Sbjct: 662 SHGTQHTSITVSDKLLQKAAENLSKVRGTLRYLK------GVIGEKQREGREELEQPILD 715

Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGR 540
            + + +          L+ +L ++   IE    A E  ++   + + +A+     + H  
Sbjct: 716 ASFLNKY---------LLSNLLDFESEIEKLYNAYEYNRVVACIQNFIANQVSSIYVH-- 764

Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
              + R    ++R+L         A+   +   
Sbjct: 765 -LIKDRLYCGDDREL--------LAIRQTLTHC 788


>gi|328954955|ref|YP_004372288.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455279|gb|AEB06473.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 542

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 355 VMGSDH-SGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           V+G D    +     A+  A       ++ V     VR  + G   KMSK  G+ I+   
Sbjct: 279 VVGKDIIRFHCVIWPALLMAAGLPLPERVFVHGFLTVRNEQTGGAEKMSKSRGNAISPEE 338

Query: 413 VVDEVGSDSVRFMML 427
           V++ +G D+ R+  +
Sbjct: 339 VIELLGVDAYRYYFM 353


>gi|320169678|gb|EFW46577.1| glutamyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 563

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 88/296 (29%), Gaps = 61/296 (20%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  V R   I D                +  
Sbjct: 71  APSPTGFLHLGGLRTALYNHLFAK--KAGGTTVLR---IED--TDQTREVKGAALSIENI 123

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
           L     +  E    G   G Y +     +   +  +LL   +  +        +  M   
Sbjct: 124 LRWTGIEFDESPTRGGNYGPYHQSQRLPIYHSHVKKLLE-TDSAYQCFCSAERLDIMRLT 182

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            +     L +++D         R +     D  +        +   L  P S  T   DM
Sbjct: 183 QQKT--GLPVKYD-KHCLTSMTREERQRRADAKE-------THVVRLNVPTSGATVVDDM 232

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH---S 361
               + + + ++    D+ LLKSDG  TY  A                  V+  DH    
Sbjct: 233 VYGSVSYPNAVID---DQVLLKSDGFPTYHLA-----------------NVVD-DHLMDI 271

Query: 362 GYVKRLEAVA----------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +V R E                  +  +        + L  +    K+SKR GD 
Sbjct: 272 SHVMRGEEWLSSTPKHIILYNRFGWRAPKFAH-----LPLLLNKDRTKLSKRQGDV 322


>gi|313680233|ref|YP_004057972.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152948|gb|ADR36799.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 866

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 56/200 (28%), Gaps = 36/200 (18%)

Query: 93  LSPSY---LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           LS +Y     +   +   +   +  +         I     N TG +H+GH     + D 
Sbjct: 4   LSKAYDPHQVEPRWAERWAERPFVADPHSGKPPFVIVMPPPNVTGVLHMGHALDNALQDA 63

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       GYE                                   LP   + G+  + V
Sbjct: 64  LTRYKRLRGYEAL--------------------------------WLPGTDHAGIATQVV 91

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
            + L  K      +   EK+L  V  +  ++    I + LK L    D            
Sbjct: 92  VERLLAKEGKTRHDLGREKFLERVWQWREESG-GQILEQLKRLGASADWSRLAFTMDEAR 150

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              +R        +G +Y G
Sbjct: 151 SRAVRYAFVRYHHEGLIYRG 170


>gi|311743181|ref|ZP_07716989.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313861|gb|EFQ83770.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 529

 Score = 41.1 bits (95), Expect = 0.60,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 102/344 (29%), Gaps = 81/344 (23%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH     +GD LA      G +V     +++ G ++   A +                
Sbjct: 20  HIGHGYTTTIGDVLARWHRQRGEQVHYLTGVDEHGQKVLRKAAAA--------------- 64

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 GV  +     L +     +L   +      ++    +   + ++   + LN   
Sbjct: 65  ------GVSPQDWVDRLVETEWKPMLATIDASNDDFIRTTEPRH-ARGVQAFWERLNEAG 117

Query: 257 DIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
            ++  E    +  G    +    D+  R G   +          ++   +      FR  
Sbjct: 118 AVYRGEFSGWYSVGSEEFVG---DDDVRDGEGDDAGHRVSVLDGSRVEHVTEANYFFR-- 172

Query: 315 MVGDDVDRPLLKSDGSYTYF----------------AADLAYFKCKYERGF------DNM 352
            + D   R L   D    +                   DL+  +  ++ G       D++
Sbjct: 173 -LSDFQQRLLDFYDAHPDFVQPASARNEVVSFVSRGLTDLSISRSTFDWGIPVPWDDDHI 231

Query: 353 IYVM-------------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI- 398
            YV              G D + + +   A    V +   + + ++     L   G+P+ 
Sbjct: 232 FYVWIEALLNYVTAVGYGQDEARFDRLWPADLHIVGKDIVRFHAIIWPA-MLMAAGLPVP 290

Query: 399 --------------KMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                         KMSK   + I    +V   GSD+ R+    
Sbjct: 291 HRVFAHGWILVGGQKMSKSKANGIHPDQIVQTFGSDAYRYYFTR 334


>gi|310817225|ref|YP_003965189.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755960|gb|ADO43889.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 854

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   +          K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQTAWDEAEAAKAVRSDDKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKRATG 69

Query: 159 Y 159
           +
Sbjct: 70  H 70


>gi|126729334|ref|ZP_01745148.1| valyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710324|gb|EBA09376.1| valyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 1029

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L +LV   RD    KMSK  G+ I    +VDE G+D++
Sbjct: 636 WVARMIMMQLAVVDEIPFHTVYLHQLV---RDEKGKKMSKTTGNVIDPLEIVDEYGADAL 692

Query: 423 RF 424
           RF
Sbjct: 693 RF 694


>gi|327398468|ref|YP_004339337.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181097|gb|AEA33278.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 930

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 101/329 (30%), Gaps = 39/329 (11%)

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDD 264
           +     +     L    + KW+P      + +MM+   D      +A  +   +F  +  
Sbjct: 422 IDNPKGELRKKALEAIDKTKWIPSWGRNRIYSMMETRPDWCISRQRAWGVPIALFKCKKC 481

Query: 265 -FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
              + D S I  + D + + G            K       +       S+    + D  
Sbjct: 482 GRVQYDKSLIDRVADEIEKYG------ADVWFEKDADYFLPEGYTCQCGSSEFEKENDIL 535

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQIN 382
            +  D   ++     A  + + E  +   +Y+ GSD   G+       +    ++     
Sbjct: 536 DVWFDSGVSHA----AVLERREELSWPASMYLEGSDQHRGWFHSSLLESVGTRDRAPYDE 591

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           VL    V    D    KMSK  G+ I    ++ + G++ +R         E +      +
Sbjct: 592 VLTHGFVV---DSKGRKMSKSLGNVIQPEKIIKKYGAELLRLWASATDYREDVRLSDEIM 648

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVH 501
           +              Y + R+  R       D D       + + +  ++  +E + +  
Sbjct: 649 RRLVDN---------YRKIRNTIRFLLGNLNDFDESKALKYDELEEIDKWVLAETEHLK- 698

Query: 502 LAEYPRVIENATIAQEPYKL----AFYLY 526
                  +  A    E + +    A Y  
Sbjct: 699 -----EKLLKAYEDYEYHVIYRNMANYCI 722


>gi|323495405|ref|ZP_08100482.1| glutamyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310328|gb|EGA63515.1| glutamyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 475

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  IR +
Sbjct: 61  MKWLGLEWNEGPYFQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKQGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +  R+  +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|295425605|ref|ZP_06818292.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064621|gb|EFG55542.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 486

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 98/342 (28%), Gaps = 48/342 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   ++         R + 
Sbjct: 39  CGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYKVKYVSNFTDVDDKMIN-----EARAEN 93

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 ++     Y     + +  E A  +        E   +  VK+   +     +  
Sbjct: 94  TTVPKLAERYINAYL-EDTEALNVEPATLHPRATHEIKE--IIAFVKELIAKGYAYEVDG 150

Query: 248 DLKALNIQHDIFISEDD-----FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           D+     +   +    D        G    I D                P   +    + 
Sbjct: 151 DVYYRAKKFADYGKLSDQNIAQLEEGASEHINDTEQQRKE--------DPIDFALWKAQK 202

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           + D               D P  K    +      +       +   D  I + G     
Sbjct: 203 EPDEIAW-----------DSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDL 245

Query: 363 YVKRLEAVAAAVSEKKAQINV---LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                E   A    K  +  V   L    V + +D    KMSK   +F+T+  ++ EV  
Sbjct: 246 EFPHHENEIAQSEAKTGKKFVNYWLHNGFVTVGKD--QEKMSKSLHNFVTVHDIIKEVDP 303

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-----QSKENPVFYVQY 456
             +RF M   +    +++    +K+     +  +N +  + Y
Sbjct: 304 QVLRFFMASVQYRRQINYSEDNLKQAQVILERFKNTLTNINY 345


>gi|260773267|ref|ZP_05882183.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612406|gb|EEX37609.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 858

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
 gi|158448209|gb|EDP25204.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
          Length = 463

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 119/377 (31%), Gaps = 37/377 (9%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DTL   + + GYEV    Y+++       +   +  R        D+ 
Sbjct: 35  IHIGNARPMIVFDTLRRYLEYKGYEV---NYVSN----FTDVDDKIIKRAN--AEGVDAS 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +    Y     K +      + ++      E           ++ +  +I  D  A  + 
Sbjct: 86  VISERYIAEVKKDMAALNVREATTHPKATEEIPD-------MIEMVKTLIEKDY-AYEVN 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             ++     F        +  ID+L        G      S   +K D     L      
Sbjct: 138 GTVYFRTRKFKDYG-KLSKKNIDDLRS------GNRDLLVSGIDEKEDPLDFVLWKPKKE 190

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
                  P    DG   +            ++   ++I +            E   A  S
Sbjct: 191 GEPSWPSPW--GDGRPGWHLE----CSVMSKKYIGDVIDIHAGGEDLIFPHHENEIAQ-S 243

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
           E           +   +      KMSK  G+F T+R + ++     +RF ML       L
Sbjct: 244 EAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYRSPL 303

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEF 491
           +F    V  ++ +N +  +  A  R +SI     D    +  ++D  +        +   
Sbjct: 304 NFSAELV--EASKNGLERILTAVDRLKSINGIDGDVDKSVADEMDAFVKKYEDAMDDDLN 361

Query: 492 DTSELQLIVHLAEYPRV 508
               + +I  L +Y  V
Sbjct: 362 TADAISVIFELVKYANV 378


>gi|21228013|ref|NP_633935.1| cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|24418695|sp|Q8PVQ1|SYC_METMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20906443|gb|AAM31607.1| Cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 473

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 126/448 (28%), Gaps = 117/448 (26%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  ++ DT+   + + GY+V               L +++               
Sbjct: 37  HIGNYRTFLLADTVVRTLQYLGYKV--------------KLVMNI--------------- 67

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +       +      L +F ++      K              L  LNI+ 
Sbjct: 68  -------TDIDDKTIRDSKAAGMSLKDFTDKYSAEFFKG-------------LDMLNIKR 107

Query: 257 DIFISEDDFHRGDPSPIRDIID---NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
                    +      +  +I+    L  +G  YE         +         +L F S
Sbjct: 108 ------ASAYPRATENVDGMIELAQKLIEKGLAYEKGGSVYYRISGFPDYGKLSKLDFDS 161

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV---MGS-DHSGYVKRLEA 369
             +G  VD      D        D A  K       +  IY     G      +++    
Sbjct: 162 IRIGASVDVDEYDKD-----NPRDFALLKASAPEEIERSIYYESPWGKIRPGWHIECSVM 216

Query: 370 VAAAVSEKKAQINVLLCE----------------------LVRLYRDGMP-----IKMSK 402
              +       ++V +                         VR +  G        KMSK
Sbjct: 217 AMNSFG---PTLDVHIGGVDLIFPHHENEIAQSEGATGIPFVRHWIHGEHLIVEGEKMSK 273

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+  TL  +V+  G + VRFM L     + LD+     +              Y + +
Sbjct: 274 SKGNVFTLPEIVEMYGGEVVRFMFLSVHYRKKLDYSETFAENAKNN---------YLKLK 324

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
                 +    +++ +  P ++   ++  +            +   +E+      P  + 
Sbjct: 325 ETLDNLEFALKNVEDEPGPGDLETLKTLPELE--------NRFREALED--DFNTPKAIT 374

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQA 550
            +  +L+   + +   G+    L  + A
Sbjct: 375 VF-RELSRTANVYLETGKNMQVLEEIHA 401


>gi|87124459|ref|ZP_01080308.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168031|gb|EAQ69289.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 876

 Score = 41.1 bits (95), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 26/121 (21%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            +        G++  +             +   P+G +H+GH R  V+ D +A       
Sbjct: 26  ERWQRQWKADGVDRTQEPAEGQKAFYALSMFPYPSGTLHMGHVRNYVITDVIARAQRMRG 85

Query: 153 --LMAFSGYEVTR--------EYYIN--DA--------GAQINTLALSVFWRYQQALYNN 192
             ++   G++           E  +N  D          AQ+N L LS+ W  +QA  ++
Sbjct: 86  DAVLHPMGWDAFGLPAENAAIERGVNPADWTDRNIAQMKAQLNRLGLSIDWEREQATCHD 145

Query: 193 D 193
           D
Sbjct: 146 D 146


>gi|315653191|ref|ZP_07906116.1| leucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489556|gb|EFU79193.1| leucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 768

 Score = 41.1 bits (95), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 489 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 543

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 544 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 577


>gi|309808144|ref|ZP_07702056.1| leucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168613|gb|EFO70719.1| leucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 768

 Score = 41.1 bits (95), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 489 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 543

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 544 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 577


>gi|260948602|ref|XP_002618598.1| hypothetical protein CLUG_02057 [Clavispora lusitaniae ATCC 42720]
 gi|238848470|gb|EEQ37934.1| hypothetical protein CLUG_02057 [Clavispora lusitaniae ATCC 42720]
          Length = 1082

 Score = 41.1 bits (95), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 51/194 (26%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+                   + K    +I     N TG +H+GH     + DT+     
Sbjct: 136 SWYAWWDKQGFFQPQFDESGNVKKEGVFSIPAPPPNVTGALHIGHALTIAIQDTMIRHNR 195

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG    ++     W+ ++   ++        Y          E  +
Sbjct: 196 MRGKTTLFLPGFDHAGISTQSVVEKQVWKTEKKTRHD--------YGREKFVEKVWEWKE 247

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           +Y +                         I+  +K L   +D        +    + + +
Sbjct: 248 EYHAR------------------------IKSQVKRLGASYDWTREAFTLNPDLSAAVTE 283

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 284 AFVRLHEDGTIYRA 297


>gi|227498613|ref|ZP_03928757.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904069|gb|EEH89987.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 830

 Score = 41.1 bits (95), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                        Y  +      K  +  +   P+G +H+GH R   +GD +A      G
Sbjct: 12  EAKWQKYWEDHHTYKVSNDDPRPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMRG 71

Query: 159 YEV 161
           Y V
Sbjct: 72  YNV 74


>gi|171185143|ref|YP_001794062.1| isoleucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934355|gb|ACB39616.1| isoleucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 977

 Score = 41.1 bits (95), Expect = 0.62,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 66/207 (31%), Gaps = 42/207 (20%)

Query: 91  LYLSPSYL-----RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145
             L P+Y+     R++L     +GI         G             G  HVGH R   
Sbjct: 6   FKLQPTYVPYEVERRVLEYWRTNGIFQKWKSWRGGPIFAFLEGPPTTNGMPHVGHVRGRT 65

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
             D +       GY+V  +        Q     + V W  ++ L        E Y     
Sbjct: 66  YKDVVLRFHRLLGYDVWPQ---GGWDMQ----GMPVEWEVEKRLKLRSKKEVERY----- 113

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
               G E   K  +EL+    E++L   +++  +            L +  D+   E+ +
Sbjct: 114 ----GLEQFAKKCNELV----EEYLTYWREWGTE-----------RLGLWLDV---ENAY 151

Query: 266 HRGDPSPIR---DIIDNLARQGYVYEG 289
               P+ I     +I     +G + E 
Sbjct: 152 ETRQPTYIEYAWRVIKKAYERGLLVED 178



 Score = 40.3 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLD 436
           KA    +L + + L + G   KMSK  G+ I  R + ++ G+D VR  +L +    E L 
Sbjct: 582 KAPYKTVLIQGLILDKHGQ--KMSKSKGNVIWARDLFEKYGADPVRLYILSKAAPWEDLA 639

Query: 437 FDFCKVK 443
           FD  +VK
Sbjct: 640 FDPDEVK 646


>gi|66802566|ref|XP_635155.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996551|sp|Q54ET5|SYLM_DICDI RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=LeuRM; AltName: Full=Leucine--tRNA ligase; Flags:
           Precursor
 gi|60463472|gb|EAL61657.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 940

 Score = 41.1 bits (95), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             P+G +H+GH R   + D +A L    GY+V 
Sbjct: 54  PYPSGALHMGHVRVYTISDCIARLKRMQGYDVI 86


>gi|294649289|ref|ZP_06726724.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824842|gb|EFF83610.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 874

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S +   +     +   +      +G    I  +   P+G +H+GH R   +GD ++   
Sbjct: 12  ASAIEPQVQQDWDNRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFY 71

Query: 155 AFSG 158
              G
Sbjct: 72  RLKG 75


>gi|254509296|ref|ZP_05121388.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219547784|gb|EED24817.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 838

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|218671833|ref|ZP_03521502.1| valyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 341

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-- 448
           L RD    KMSK  G+ I    ++DE G+D++R             F    +  Q ++  
Sbjct: 112 LVRDKNGQKMSKSKGNVIDPLELIDEYGADALR-------------FTLAIMAAQGRDVK 158

Query: 449 -NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            +P     Y   R           F +++      + +P+ +E   +   ++  LA   R
Sbjct: 159 LDPARIAGY---RNFGTKLWNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTELARTER 214

Query: 508 VIENATIAQ 516
            +  A  A 
Sbjct: 215 DVTEALEAF 223


>gi|254468063|ref|ZP_05081469.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086873|gb|EDZ64156.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 805

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             P+G +H+GH R   +GD ++    F G+ V 
Sbjct: 42  PYPSGKLHMGHVRNYTIGDVISRFKRFQGFNVM 74


>gi|78776936|ref|YP_393251.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497476|gb|ABB44016.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 875

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 117/382 (30%), Gaps = 45/382 (11%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L+     KI        ++  +++  +G   +I     N TG +H+GH     + D +  
Sbjct: 9   LTEDKFYKIWEERGYFEVDSNKSIQEEGKNFSIMMPPPNVTGRLHIGHALTFTLQDIITR 68

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GY+   +   + AG     +         +     +    E      +LK   + 
Sbjct: 69  YKRMDGYKTLWQPGTDHAGIATQNVV--------EKQLLAEGTTKEEIGREAFLKRAWEW 120

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD--- 269
            A+          +    P  K         + +   +A    ++  +     +  +   
Sbjct: 121 KAESAGIMTSQLRKMGVSPAWKRERFTMDDGLQKSVKEAFVHLYNQGLIVRGNYMVNWCT 180

Query: 270 -PSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST------------- 314
               + DI +++    G  Y    P        +    R +  F  T             
Sbjct: 181 HDGALSDIEVEHEDHDGKFYHIKYPFADGSGFVEVATTRPETYFGDTAVMVHPDDERYKH 240

Query: 315 MVGDDVDRPLLKSDGSY---TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           ++G  +  PLL+ + S    ++ A D      K     D   Y +G  H      +    
Sbjct: 241 LIGKKIKLPLLQREVSIIADSHVAMDFGTGVVKVTPAHDQNDYEVGKRHDLEFITVFDEK 300

Query: 372 AAVSEKKA------QINVLLCELVRLYRDGMPIKMSKRA---GDFITLRHVVDE------ 416
             ++E         ++      + RLY +G  +K+ +     G     +++V+       
Sbjct: 301 GILNEYAGEFKGLERLEARDIIMKRLYEEGFVVKIEEHKHQVGHCYRCKNIVEPYISKQW 360

Query: 417 -VGSDSVRFMMLWRKNSELLDF 437
            V S+  R  +    N E   F
Sbjct: 361 FVRSEVARKSIEKTNNGEAKFF 382


>gi|118386473|ref|XP_001026355.1| leucyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89308122|gb|EAS06110.1| leucyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 1041

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 58/215 (26%), Gaps = 15/215 (6%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K           Y  N      K  + F      G +H+GH       D +A     +
Sbjct: 18  LEKQAQKKWEDEKTYESNPNPGQKKYLVTFPYPYLNGRLHLGHSYTMTKVDFIARYKRLN 77

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G+ V   +            A +   R +   Y      PE        +     +  K 
Sbjct: 78  GFNVV--FPFGFHCTGQPISAAATKLRREIEEYGLPPVFPE-----EKKEQRQWNILKKM 130

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN--IQHDIFISEDDFHRGDPSPIRD 275
                + P+ +       Y           DLK+    + H       D +    S I+ 
Sbjct: 131 GIPDEDIPKFQEGKFWCGY----FHPFATQDLKSFGVAVDHRRSFITTDVNPYYDSFIQW 186

Query: 276 IIDNLARQGYVYEGILPP--PKSKTTQKCDMDRKQ 308
               L  + Y+  G  P     +      D DR Q
Sbjct: 187 QFTLLKERNYIRYGKRPSIFSVADNQICADHDRAQ 221


>gi|89069121|ref|ZP_01156494.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89045294|gb|EAR51360.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 991

 Score = 40.7 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 66/260 (25%), Gaps = 47/260 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEY-GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
               +     L      G  +       +     +     N TG +H+GH     + D L
Sbjct: 6   TFDAAAAEPRLYEAWERGGAFRAGANARRDESFCVMIPPPNVTGALHMGHAFNNTLQDIL 65

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  G++              +   ++   + ++ L +  ++               
Sbjct: 66  VRWHRMRGFDTL-------WQPGQDHAGIATQLQVEKLLASEGNE--------------- 103

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF----- 265
                           EK+L  V D+  Q    I+   LK L    D   +         
Sbjct: 104 ---------GRRELGREKFLEKVWDWKGQYGSTIVNQ-LKRLGSSCDWSRNAFTMAGAPG 153

Query: 266 -----HRGDPSPIRDIID---NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
                H   P     +I     +  +G +Y G          +    D +          
Sbjct: 154 DPRTGHENSPDFHDAVIKVFVEMYDKGLIYRGKRLVNWDPHFETAISDLEVENVEVDGHM 213

Query: 318 DDVDRPLLKSDGSYTYFAAD 337
                PL   + +YTY   D
Sbjct: 214 WHFRYPLAGGE-TYTYVERD 232



 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV  +     V L +LV   RD    KMSK  G+ I    ++DE G+D +
Sbjct: 601 WVARMMMMQLAVVGEAPFHTVYLHQLV---RDEKGQKMSKTRGNVIDPLEIIDEYGADPL 657

Query: 423 RFM 425
           RF 
Sbjct: 658 RFA 660


>gi|288930565|ref|YP_003434625.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892813|gb|ADC64350.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 864

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 36/174 (20%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
           K     I+     PTG  H+G+       D +A      GYE                  
Sbjct: 30  KKPHFIIDTPPPYPTGSFHIGNALNWCYIDFIARYKRMKGYE------------------ 71

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
             V +      +   +++      G+    V               P EK+  +  +++ 
Sbjct: 72  --VMFPQGWDCHGLPTEVKVEELYGIKKNDV---------------PREKFRELCVEFTE 114

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
           + + K +++ +K L +  D        +       +     L  +G++Y+G  P
Sbjct: 115 RNI-KRMKETMKKLGLSIDWSKEYVTMYPEYYRKTQVSFVRLYEKGWIYKGYHP 167


>gi|319406299|emb|CBI79936.1| Leucyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 892

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    K   +I      +      +  K  +  +   P+G +H+GH R   +GD +A
Sbjct: 23  RYNPRAQEKKWQTIWDEKKIFQAADDSEREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 82

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 83  RYKRAKGFHV 92



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 72/270 (26%), Gaps = 51/270 (18%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
           D +D      + Y     P      +  D                ++  +L         
Sbjct: 526 DTMDTFVDSSWYYARFTTP---YAQEPIDQKIAAQWLPVQQYIGGIEHAILH-------- 574

Query: 335 AADLAYFKCKYERGFDNMIYV-MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR--- 390
              L Y +  + R    + YV +     G   +   V     ++K  ++    E+V    
Sbjct: 575 ---LLYARF-FTRAMKMIGYVSVDEPFKGLFTQGMVVHETYQDEKGWVSPADVEIVEKDG 630

Query: 391 -----------LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
                          G   KMSK   + +    ++   G+D+VR+ ML     E      
Sbjct: 631 KRCAYKLTDQSEVMIGSIEKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPERDVI-- 688

Query: 440 CKVKEQSKENPVFYVQ-------YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
               E   E    +VQ        +    + +   A      L+        +      D
Sbjct: 689 --WTESGIEGAYRFVQRVWRLVALSAPVLKGVKSCAGQQGAALELSKAAHRTLCAVE--D 744

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLA 522
             E      LA + R +           +A
Sbjct: 745 DLE-----KLA-FNRAVARLYELL--NVIA 766


>gi|307295056|ref|ZP_07574898.1| glutamyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879530|gb|EFN10748.1| glutamyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 484

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 99/299 (33%), Gaps = 43/299 (14%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181
           K  +   + +PTG +H+G  R A+     A      G          D          ++
Sbjct: 14  KQVVTRFAPSPTGFLHIGGARTALFNWLFAR---HHGGRFLLRIEDTDRARSTEEAVAAI 70

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSVQA 240
           F          D      +        V  +L    ++      PEE  L  +++    A
Sbjct: 71  FDGLDWLGLGGDEPAVFQFERTPRHAEVANQLLAGGHAYRCYATPEE--LAELREQQRAA 128

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              +  D         D   SE     G P  IR                L  P+   T 
Sbjct: 129 KQPMRYD-----GRWRDRDPSEAP--EGAPFVIR----------------LKAPREGETV 165

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  + +++ ++  +    D  LL+SDG+ TY    LA     ++ G  ++I   G DH
Sbjct: 166 IEDAVQGRVVVQNAELD---DMILLRSDGTPTYM---LAVVVDDHDMGVTHVIR--GDDH 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
                R   +  A++ ++      +   + L       K+SKR G  + +    DE+G 
Sbjct: 218 LNNAFRQLGIIRAMNWEEP-----VYAHIPLIHGSDGAKLSKRHG-ALGVDAYRDEMGM 270


>gi|262381098|ref|ZP_06074236.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296275|gb|EEY84205.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 1140

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   + +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 647 GVDQTRGWFFTLHALGTMIFDSVAYKAVVSNGLV---LDKNGNKMSKRLGNAVDPFSTIE 703

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 704 KYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 753


>gi|221065739|ref|ZP_03541844.1| valyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220710762|gb|EED66130.1| valyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 967

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 37/202 (18%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167
           +G+             +I+    N TG +H+GH     + D+L       GY        
Sbjct: 38  AGVRGTGKPDATQPSFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGT 97

Query: 168 NDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
           + AG   QI      V  R  Q               GV    +G+   D+++ ++    
Sbjct: 98  DHAGIATQI------VVERQLQT-------------QGVSRYDLGR---DEFTKKVWE-- 133

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                   K+ S   +   +R     ++   + F  +D   +     + +    L +QG 
Sbjct: 134 -------WKEQSGNTITTQMRRMGDTVDWSREYFTMDDKLSK----VVTETFVKLYQQGL 182

Query: 286 VYEGILPPPKSKTTQKCDMDRK 307
           +Y G          Q    D +
Sbjct: 183 IYRGKRLVNWDPVLQSAVSDLE 204


>gi|73669547|ref|YP_305562.1| leucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729473|sp|Q46AW0|SYL_METBF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72396709|gb|AAZ70982.1| leucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 966

 Score = 40.7 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 48/176 (27%), Gaps = 13/176 (7%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                   +  +    K  K  I        G +H GH R   +GD +A      GY V 
Sbjct: 14  WQKKWDESQIFQAEPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGYNVL 73

Query: 163 --REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPGVYLKHVGKELADKYS 218
               +++   G  I  LA  +  R  Q +  Y     +P    P         +  +K  
Sbjct: 74  YPMGFHV--TGTPIVGLAELIANRDPQTMDVYERLHGIPGDILP-------TLDTPEKIV 124

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                  E+    I      +          K       I + E         P++
Sbjct: 125 DYFKRESEKAMRNIGYSIDWRRKFTTTDPTYKKFIEWQYIRLGEKGLIVKGSHPVK 180


>gi|319790327|ref|YP_004151960.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114829|gb|ADU97319.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 917

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +             +  ++  K     +E     P+G +H+GH R   +GD +A  
Sbjct: 4   NPQEIEIKWQKRWEEEGVFRSSVSDKKKFYCLEMF-PYPSGKIHMGHVRNYSIGDVIARF 62

Query: 154 MAFSGYEV 161
              +G+ V
Sbjct: 63  KRLAGFNV 70


>gi|309810101|ref|ZP_07703947.1| leucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169600|gb|EFO71647.1| leucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|297677640|ref|XP_002816693.1| PREDICTED: valyl-tRNA synthetase, mitochondrial-like isoform 2
           [Pongo abelii]
          Length = 923

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 44/160 (27%), Gaps = 32/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       G                            Q L
Sbjct: 6   PNVTGSLHIGHALTVAIQDALVRWHRMRG---------------------------DQVL 38

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +   SD        V  K    +L  +          E +L  V  +  +A    I + L
Sbjct: 39  WVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKGGEICEQL 93

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +AL    D          G    + +    L + G +Y  
Sbjct: 94  RALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 133


>gi|296532262|ref|ZP_06895004.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
 gi|296267413|gb|EFH13296.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
          Length = 956

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 50/167 (29%), Gaps = 27/167 (16%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    V+ D +      SG +     YI         +   V   Y+   
Sbjct: 77  PYANGALHIGHALNKVLKDVVNRSAQMSGRDA---NYIPGWDCHGLPIEWKVEEEYRN-- 131

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
                  P+G Y G   K     L              ++    + Y+    + + R++ 
Sbjct: 132 -------PKGKYQGGRDKDAVPVL--------------EFRAECRAYAA-HWLDVQREEF 169

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           K L +  D             + I   I      G +Y G+ P   S
Sbjct: 170 KRLGVAGDWAGRYATMDFPSEAAIAGEIGKFLMNGSLYRGLRPVMWS 216



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 34/219 (15%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +Y+ GSD   G+      +  +V     A    +L     L   G   KMSK  G+    
Sbjct: 600 LYLEGSDQHRGWFHSS--LLESVGANGHAPFKAILTHGFVLDETGR--KMSKSLGNVTAP 655

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470
           + V  + G+D +R  ++    ++ L      + +Q++          Y R R+  R    
Sbjct: 656 QEVTKQYGADILRLWVMNSDTADDLRIGKNILAQQAEL---------YRRIRNTLRWLLG 706

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ-------EPYKLAF 523
                  + F  +     +E    E  ++  L E    +  A           E +    
Sbjct: 707 -----SLEGFSESETLPYAELPELERWVLHRLTELDGRMRKAVADYDWNGVYPEIHAFC- 760

Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
                A+     +   R++  L    A++ +    R  L
Sbjct: 761 -----ATDLSAFYFDIRKD-SLYCDAADSPRRRAARTVL 793


>gi|293611283|ref|ZP_06693581.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826534|gb|EFF84901.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 945

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 91/291 (31%), Gaps = 51/291 (17%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSK 297
             I R     + I   +    ++ H   P  I ++   +  +G    +  E      +  
Sbjct: 475 WCISRQRTWGVPIPFFVHKDTNELHPRTPELIEEVAQLIEEEGIEAWFKREAKDFIGEDA 534

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D   + F S               G+  Y   +    + + E   D  +Y+ G
Sbjct: 535 EQYNAVRDTLDVWFDS---------------GTTHYAVLE---QRDELESPAD--LYLEG 574

Query: 358 SDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SD   G+ +     + A+  +     +L         D    K+SK  G++I L  ++ +
Sbjct: 575 SDQHRGWFQSSLLTSMAIHNRAPYKALLTHGF---TVDENGRKLSKSLGNYIPLEEIIKQ 631

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR----QAKDIF 472
           +G+D +R  +         D+ +     +        V  +Y R R+  R          
Sbjct: 632 LGADGLRLYVASS------DYRYEIAASKE---IFSRVSDSYRRIRNTLRFLLANLNGFK 682

Query: 473 PDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           P  D  D+     + Q      +E+Q         + I  A      + + 
Sbjct: 683 PSTDALDVDDLIALDQYILQRANEVQ---------QTIITAYEEMNFHVVC 724


>gi|268370295|ref|NP_001161205.1| valyl-tRNA synthetase, mitochondrial isoform 3 [Homo sapiens]
          Length = 923

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 44/160 (27%), Gaps = 32/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       G                            Q L
Sbjct: 6   PNVTGSLHIGHALTVAIQDALVRWHRMRG---------------------------DQVL 38

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +   SD        V  K    +L  +          E +L  V  +  +A    I + L
Sbjct: 39  WVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWQWK-EAKGGEICEQL 93

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +AL    D          G    + +    L + G +Y  
Sbjct: 94  RALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 133


>gi|284990117|ref|YP_003408671.1| aminoacyl-tRNA synthetase class Ia [Geodermatophilus obscurus DSM
           43160]
 gi|284063362|gb|ADB74300.1| aminoacyl-tRNA synthetase class Ia [Geodermatophilus obscurus DSM
           43160]
          Length = 861

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 31/198 (15%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            +   +      +     D    KMSK  G+ +T   V++  G+D+VR+     +     
Sbjct: 568 FEHGTVPWTHATISGFVVDPDRKKMSKSKGNVVTPIDVLERYGTDAVRWRAAGARPGADS 627

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            FD  ++K   +                I    K +       L     +   +  +  +
Sbjct: 628 PFDEAQMKVGRR------------LAIKILNVGKFV-----LGLGASADLSASAVTEPVD 670

Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFY--LYDLASVFHGHWSHGRENPRL--RFVQAN 551
             L+  LA    V++ AT A E Y    Y    +L+  F   WS   +   L       +
Sbjct: 671 RGLLAGLAG---VVDEATAAMETY---NYTRALELSEAF--FWSFCDDYVELVKSRAYGS 722

Query: 552 NRKLTMMR--LQLVHAVA 567
                  R  L L  +V 
Sbjct: 723 GPAAESARATLALALSVQ 740



 Score = 38.7 bits (89), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 39/156 (25%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +  +       +          +    +I+      +G +HVGH       D +A 
Sbjct: 28  LEDKWTGRWAEDDTYAFDRAAALAAPREQTWSIDTPPPTASGSLHVGHVFSYTHTDIVAR 87

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G  V      +D G        + +          D        PG   + V + 
Sbjct: 88  YQRMRGKHVYYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDEGFEPPAKPGKDQQPVSRR 147

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +    L    E  +  + +   +      +   
Sbjct: 148 NFVELCMRLTEEDERAFEQLWRRVGLSVDWNNVYRT 183


>gi|319427333|gb|ADV55407.1| leucyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 859

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|78485560|ref|YP_391485.1| glutamyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|118595565|sp|Q31GB2|SYE_THICR RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78363846|gb|ABB41811.1| glutamyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 470

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 97/279 (34%), Gaps = 41/279 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G    R   I D       L  S      QA
Sbjct: 7   APSPTGYLHIGGVRTALFSWLYAK--QKKGEFTLR---IED-----TDLERSTQE-SVQA 55

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           + +  + L   Y  G   +    E  D+Y + + +  +         Y+    +  +R+ 
Sbjct: 56  ILDGMAWLGLDYDKGPIYQ---TERFDRYKAVIQDLMDRGLAYYC--YASPEELDEMREA 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            KA   +        DF    P  ++ +I                P+       D+ + +
Sbjct: 111 QKARGDKPRYDGRYRDFDGTPPEGVKPVI------------RFKNPEDGEVVIDDLVKGR 158

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           ++  +  +    D  + +SDG+ TY    +      ++    ++I   G DH     R  
Sbjct: 159 IVVANKELD---DLVIARSDGTPTYNLTVV---VDDWDMEMTHVIR--GDDHINNTPRQI 210

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+  +  +   +    + L  DG   ++SKR G  
Sbjct: 211 NLYKALGAEPPKFAHI---PMVLGEDG--SRLSKRHGAV 244


>gi|146293957|ref|YP_001184381.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166231643|sp|A4Y9E9|SYL_SHEPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145565647|gb|ABP76582.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 859

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|325913404|ref|ZP_08175771.1| leucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477330|gb|EGC80475.1| leucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|312870902|ref|ZP_07731007.1| leucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872194|ref|ZP_07732267.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092278|gb|EFQ50649.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093592|gb|EFQ51931.1| leucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|83309126|ref|YP_419390.1| leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123768100|sp|Q2WBE4|SYL_MAGMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82943967|dbj|BAE48831.1| Leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 862

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +             GK     +E     P+G +H+GH R   +GD +A      G
Sbjct: 19  ARWQQAWEAKRCFEAEIAPGKPKYYVLEMF-PYPSGRIHMGHVRNYTLGDVVARYKRAKG 77

Query: 159 YEV 161
           + V
Sbjct: 78  FNV 80


>gi|42520335|ref|NP_966250.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652649|sp|Q73HS9|SYV_WOLPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42410073|gb|AAS14184.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 864

 Score = 40.7 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 42/217 (19%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            +I+  G +  R    K     I+      +G +H+GH       D +A      G +V 
Sbjct: 15  CNILWEGSKVYRWNGEKDNTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDVF 74

Query: 163 REYYIN--DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
             Y I   D G     L    +    + +                L  +  E+ +K   E
Sbjct: 75  --YPIGFDDNGLPTERLVEQTYKTRAKEVG------------REKLIEMCHEVIEKSKQE 120

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                                    ++  K++ I +D  +      +   +  +    +L
Sbjct: 121 F------------------------KELFKSVGISYDWDLEYHTISKETVTLSQMSFIDL 156

Query: 281 ARQGYVYEGILPPPKS--KTTQKCDMDRKQLLFRSTM 315
             +GY Y  + P        T     + +  +F S++
Sbjct: 157 YNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVFESSL 193


>gi|312875055|ref|ZP_07735073.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089450|gb|EFQ47876.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|300087851|ref|YP_003758373.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527584|gb|ADJ26052.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 1015

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  +  + +  NV+    +    DG   KMSK  G+ +T   V+D+ 
Sbjct: 586 DQTRGWFYSLHALSTLLFGRPSFQNVICLGHI---LDGKGEKMSKSRGNVVTPESVIDKH 642

Query: 418 GSDSVRFMMLWRK---NSELLDFDFCKVKEQSKENPV-----FYVQYAYA 459
           G+D+VR+ +       N+        K   +S  + +     F+V YA  
Sbjct: 643 GADAVRWYLFTASPAGNARRFSEQLVKEVSRSFMSTLWNVYSFFVLYANI 692


>gi|259501448|ref|ZP_05744350.1| leucine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190828|ref|ZP_07267082.1| leucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167197|gb|EEW51692.1| leucine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|150007105|ref|YP_001301848.1| isoleucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|149935529|gb|ABR42226.1| isoleucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 1140

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   + +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 647 GVDQTRGWFFTLHALGTMIFDSVAYKAVVSNGLV---LDKNGNKMSKRLGNAVDPFSTIE 703

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 704 KYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 753


>gi|120597870|ref|YP_962444.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166231645|sp|A1RGU5|SYL_SHESW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120557963|gb|ABM23890.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 859

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|301311233|ref|ZP_07217161.1| isoleucine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300830807|gb|EFK61449.1| isoleucine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 1140

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   + +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 647 GVDQTRGWFFTLHALGTMIFDSVAYKAVVSNGLV---LDKNGNKMSKRLGNAVDPFSTIE 703

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 704 KYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 753


>gi|298377524|ref|ZP_06987476.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265543|gb|EFI07204.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 1140

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   + +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 647 GVDQTRGWFFTLHALGTMIFDSVAYKAVVSNGLV---LDKNGNKMSKRLGNAVDPFSTIE 703

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 704 KYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 753


>gi|255015281|ref|ZP_05287407.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256840399|ref|ZP_05545907.1| isoleucyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256737671|gb|EEU50997.1| isoleucyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 1140

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   + +  A   V+   LV    D    KMSKR G+ +     ++
Sbjct: 647 GVDQTRGWFFTLHALGTMIFDSVAYKAVVSNGLV---LDKNGNKMSKRLGNAVDPFSTIE 703

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 704 KYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 753


>gi|237794388|ref|YP_002861940.1| glutamyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|229263009|gb|ACQ54042.1| glutamate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 485

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 97/295 (32%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +Y+ +L+   E             
Sbjct: 59  IYNTLKITDLSHDEGP-DIGGPVGPYVQSERRNIYIEYAEKLIEKGEA------------ 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ L  L    +       + +      ++ I     +G  Y      P + +T
Sbjct: 106 YYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIAKKIAEGVPYVIRQKNPTTGST 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 166 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 218 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 266


>gi|254281834|ref|ZP_04956802.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678037|gb|EED34386.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 461

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 124/412 (30%), Gaps = 96/412 (23%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV DTL  ++           Y N                Y + + + D  +
Sbjct: 39  HIGNARPVVVFDTLNRVLRSR--------YPN--------------VIYARNITDIDDKI 76

Query: 197 PEGYY-PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
            E     G  +K V  E   KY  ++ N      +P ++ ++   +   + D ++ L   
Sbjct: 77  IEAARSAGTDIKDVTDEFTAKYREDMGNL--NTLIPDIEPHATDNI-GPMLDLMERLLAG 133

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQG--------YVYEGILPPPKSKTTQKCDMDRK 307
              +++E          +   +D++A  G         +  G      S      D    
Sbjct: 134 DHAYVAE--------GHVLFAVDSMAEYGQLSGRSLDDMLAGARVEVASYKRHPGDF--- 182

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV--- 364
            L   S+      + P  +    +    + +       +    + I + G          
Sbjct: 183 VLWKPSSDDEPGWESPWGRGRPGWHLECSAM------IKAHLGDTIDIHGGGRDLIFPHH 236

Query: 365 --KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
             +R ++  A   E       +   +   Y D    KMSK  G+  T+R ++     + +
Sbjct: 237 ENERAQSCCAYGGE------FVRYWMHNAYLDMDGEKMSKSLGNVRTVRELLQSYRGEVL 290

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           RF +L       L F    +         FY         S  RQ  D  P+        
Sbjct: 291 RFALLSAHYRSELTFSESLLDNAKSALDSFY---------SALRQVADTAPEA------- 334

Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
                    + SE  +   L +             P  +A  L+ ++   + 
Sbjct: 335 --------VEASETAVAQALLD---------DLNTPQAIAE-LHAVSKRLNK 368


>gi|153001820|ref|YP_001367501.1| leucyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151366438|gb|ABS09438.1| leucyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 874

 Score = 40.7 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 21  NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 80

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 81  QRLQGKNV 88


>gi|332185552|ref|ZP_08387300.1| isoleucyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014530|gb|EGI56587.1| isoleucyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 943

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 58/186 (31%), Gaps = 21/186 (11%)

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           +Y  G    +Y+ GSD   G+ +     +     +     VL         DG   KMSK
Sbjct: 591 RYGEGTRANLYLEGSDQHRGWFQSSLLESCGTRGRAPYDAVLTHGF---ALDGQGRKMSK 647

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +    ++ E G+D +R         E +      +   S          +Y + R
Sbjct: 648 SLGNVVDPLKIIGESGADILRIWTASTDYFEDVRIGKEVLATASD---------SYRKLR 698

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           + FR           D F              E  ++  L      +  A  A E  +  
Sbjct: 699 NTFRYMLGA-----LDGFTEEERISFDAMPELERYILARLTALDTELRRAADAYEFNR-- 751

Query: 523 FYLYDL 528
            YL  L
Sbjct: 752 -YLRAL 756


>gi|325911647|ref|ZP_08174055.1| leucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476633|gb|EGC79791.1| leucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|296129250|ref|YP_003636500.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas flavigena DSM 20109]
 gi|296021065|gb|ADG74301.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas flavigena DSM 20109]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 43/185 (23%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   +++E GSD+VR+     +      F+  ++K          
Sbjct: 595 DPDRKKMSKSKGNVVTPLGLLEEHGSDAVRYWAASARLGTDAAFEVGQMK---------- 644

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ--LIV-HLAEYPRVIE 510
                     I R+      +    +       +    D + +   L    LA    V+E
Sbjct: 645 ----------IGRRLAIKVLNASKFVLSFGPADEPVSLDAAAVTQPLDRAMLAGLAEVVE 694

Query: 511 NATIAQEPYKLAFY----LYDLASVFHGHWSHGRENPRLRFVQA---------NNRKLTM 557
            AT A +      Y      +L   F   W+   +   L   +A            +   
Sbjct: 695 QATAALD-----AYDHTRALELTETF--FWTFCDDYLELVKDRAYGAGASAADVTPETAS 747

Query: 558 MRLQL 562
            R  L
Sbjct: 748 ARAAL 752


>gi|227823849|ref|YP_002827822.1| leucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254782510|sp|C3MB60|SYL_RHISN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|227342851|gb|ACP27069.1| leucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 876

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +         +    N   +     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  RWQQEWDARKVFETENDDPREKYYVLEMF-PYPSGRIHMGHVRNYTMGDVVARYKRARGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|193214471|ref|YP_001995670.1| isoleucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087948|gb|ACF13223.1| isoleucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 1078

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 29/171 (16%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+   +  K A  N+++   + L +DG   KMSK  G+ +    ++ 
Sbjct: 582 GVDQTRGWFYTLHAIGTLIFNKPAYKNLIVNGHI-LDKDGQ--KMSKSKGNVVDPFEMMS 638

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           + G+DS+R+ ++          F+  ++ E  ++       +  F+V YA       F  
Sbjct: 639 KYGADSLRWYLISTSPPWRPKSFNPEELLEGQRKFFRALVNSYNFFVLYANVDE---FDY 695

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
           +++  P  +     R +I   +        L+ H       +E A    +P
Sbjct: 696 SENNLPVCERSELDRWIISALN-------TLVKH-------VEAAMENYDP 732


>gi|329119551|ref|ZP_08248235.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464338|gb|EGF10639.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 691

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 34/154 (22%)

Query: 397 PIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP---VF 452
             KMSK  G FIT +  +++ +  + +R+ +  + NS++ D D       S+ N      
Sbjct: 342 GQKMSKSRGTFITAKSYLEQKLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGK 401

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           YV  A      I ++ +    D+                      L+  LA     I  A
Sbjct: 402 YVNIAARASGFIAKRFEGSLKDVSGS------------------ALLKKLAAESETIAAA 443

Query: 513 TIAQEPYKLAFY---LYD---LASVFHGHWSHGR 540
              +E      Y   L D   LA   + +    +
Sbjct: 444 YEERE------YARALRDIMALADAVNEYTDANK 471


>gi|325124001|gb|ADY83524.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 945

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 91/291 (31%), Gaps = 51/291 (17%)

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG----YVYEGILPPPKSK 297
             I R     + I   +    ++ H   P  I ++   +  +G    +  E      +  
Sbjct: 475 WCISRQRTWGVPIPFFVHKDTNELHPRTPELIEEVAQLIEEEGIEAWFKREAKDFIGEDA 534

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                  D   + F S               G+  Y   +    + + E   D  +Y+ G
Sbjct: 535 EQYNAVRDTLDVWFDS---------------GTTHYAVLE---QRDELESPAD--LYLEG 574

Query: 358 SDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           SD   G+ +     + A+  +     +L         D    K+SK  G++I L  ++ +
Sbjct: 575 SDQHRGWFQSSLLTSMAIHNRAPYKALLTHGF---TVDENGRKLSKSLGNYIPLEEIIKQ 631

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR----QAKDIF 472
           +G+D +R  +         D+ +     +        V  +Y R R+  R          
Sbjct: 632 LGADGLRLYVASS------DYRYEIAASKE---IFSRVSDSYRRIRNTLRFLLANLNGFK 682

Query: 473 PDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522
           P  D  D+     + Q      +E+Q         + I  A      + + 
Sbjct: 683 PSTDALDVDDLIALDQYILQRANEVQ---------QTIITAYEEMNFHVVC 724


>gi|319760262|ref|YP_004124200.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318038976|gb|ADV33526.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 951

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 353 IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +YV GSD   G+       + A++ K     VL         D    KMSK  G+ I+ +
Sbjct: 570 LYVEGSDQYRGWFMSSLITSVAINNKAPYKQVLSHGF---TVDSQGNKMSKSLGNIISPK 626

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            ++D+ GSD +R  +     S+ +      +K  ++
Sbjct: 627 DIIDKFGSDVLRLWIASSDYSKDMTVSDRNLKSITE 662


>gi|309805058|ref|ZP_07699112.1| leucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165620|gb|EFO67849.1| leucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|292490669|ref|YP_003526108.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579264|gb|ADE13721.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 819

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 31/192 (16%)

Query: 333 YFAADLAYFKCKYERGFDNMI---YVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INV 383
           Y   D        ERG   +    Y+ G +H+     Y +    V   +   +       
Sbjct: 505 YCCPDNDAAMV-DERGHYWLPVDQYIGGIEHAVLHLLYARFFHKVMRDMGLVRGDEPFTH 563

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           LL + + L +DG   KMSK  G+ +  + ++++ G+D+ R  +++    E         +
Sbjct: 564 LLTQGMVL-KDGA--KMSKSKGNTVDPQALIEQYGADTARLFIMFAAPPEQ---SLEWSE 617

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
              +         A+   + ++R                +V P E +  ++E +L+    
Sbjct: 618 SGVEG--------AHRFLKRLWR-----MVATHVAQRQGSVPPLEVKTLSAEQKLLRT-- 662

Query: 504 EYPRVIENATIA 515
           +    I  A+  
Sbjct: 663 KVHETIVKASDD 674


>gi|283954908|ref|ZP_06372424.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793748|gb|EFC32501.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 463

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 83/283 (29%), Gaps = 40/283 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  + R                 +    ++A
Sbjct: 10  APSPTGYLHIGGLRTALYNYLYAR--KNGGNFLLRI------------ENTDLKRNSKEA 55

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                                  E  D Y   +    +E                + +++
Sbjct: 56  TKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDE---------GKAYYCYMSKEE 106

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L  L  +      E    R            +  QG      +  P+S      D  + +
Sbjct: 107 LDELRAKQ-----EAAKERPRYDGRYREFKGMPPQGIEPVVRIKAPQSGEIVFEDGVKGE 161

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F++  + DD    + +SDG+ TY    +         G  ++I   G DH     +  
Sbjct: 162 VRFKAEDIMDDF--IIARSDGTPTYNFTVV---IDDALMGVSDVIR--GDDHLSNTPKQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +  A+  K  +        V +       K+SKR G    + 
Sbjct: 215 VLYQALGFKIPKFFH-----VAMIHGEDGKKLSKRHGATDVME 252


>gi|258405548|ref|YP_003198290.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797775|gb|ACV68712.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 831

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
              +   +          K     +E     P+G +H+GH R   +GD +A      GY 
Sbjct: 13  WQDAWSRNRDFDTAVDPDKPKYYVLEMF-PYPSGRIHMGHVRVYTIGDVIARFKRMRGYN 71

Query: 161 V 161
           V
Sbjct: 72  V 72


>gi|242022374|ref|XP_002431615.1| Valyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212516923|gb|EEB18877.1| Valyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 1145

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 69/244 (28%), Gaps = 34/244 (13%)

Query: 94  SPSYLRKILSSIVVS----GIEYGRNLIGK---GTKVNIEFVSANPTGPMHVGHCRCAVV 146
           SP ++     S          EYGR  + +     K  +     N TG +H+GH     +
Sbjct: 91  SPQFVEAAWYSWWEKEGFFKPEYGRASVHESNPKGKFVMIIPPPNVTGSLHLGHALTNSI 150

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---------DLP 197
            D L       G         + AG     +   + W+ +Q   +            +  
Sbjct: 151 EDCLTRWNRMKGRTTLWVPGSDHAGIATQVVVEKMLWKDEQKTRHEIGREKFIQKVWEWK 210

Query: 198 EG---------YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI---- 244
                      + PG     +  ++  +    L    ++    I ++  +Q + +     
Sbjct: 211 NANRMKGRTTLWVPGSDHAGIATQVVVE--KMLWKDEQKTRHEIGREKFIQKVWEWKNAK 268

Query: 245 ---IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
              I   L+ L    D             + + +    L   G +Y        S T + 
Sbjct: 269 GDRISQQLRRLGSSVDWDRYCFTMDPQLCTAVTEAFVQLHESGLIYRSDRLVNWSCTLKS 328

Query: 302 CDMD 305
              D
Sbjct: 329 AISD 332


>gi|86607800|ref|YP_476562.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556342|gb|ABD01299.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 912

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 34/240 (14%)

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              GFD +I+         V R+  + +       QI      +  L RD    KMSK  
Sbjct: 502 MSTGFD-IIFFW-------VARMAMMGSQF---TGQIPFKDVYINGLVRDEHGAKMSKTK 550

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I    ++D+ G+D++R+ ++        D      ++  +   V   +    +  + 
Sbjct: 551 GNGIDPLELLDKYGTDALRYALVKEVVGAGQDIRLAYDRKTGESASVEAARNFANKIWNA 610

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKL- 521
            R     F  ++ +      +   +      L+L     L+             E Y L 
Sbjct: 611 SR-----FVLMNLEGQTPAQLGSPA---PEALELADRWILSRLHSTATQVIAELEAYGLG 662

Query: 522 --AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV-ASIINSGLNII 577
             A  LY L    F   +           ++  +             V A+++ + L ++
Sbjct: 663 EGARLLYSLIWDDFCDWY----IELVKPRLRGEDLASKRA----AQKVLATVLETILKLL 714


>gi|73666911|ref|YP_302927.1| leucyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|123759459|sp|Q3YSH6|SYL_EHRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72394052|gb|AAZ68329.1| leucyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 829

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
              +         + K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 9   EQDIQKKWNFYTDVKKAQCYVLEMF-PYPSGNIHMGHLRNYTIGDVIARYKRACG 62


>gi|34556624|ref|NP_906439.1| isoleucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833215|sp|Q7MAL0|SYI_WOLSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34482338|emb|CAE09339.1| ISOLEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 915

 Score = 40.7 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V+ A++      ++L         D    KMSK  G+ I  + 
Sbjct: 566 YLEGSDQHRGWFQSSLLVSCAINHHAPYQSILTHGF---TVDEKGEKMSKSKGNVIAPKD 622

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           V+ E GS+ +R  +        L      + +Q  EN 
Sbjct: 623 VLKEFGSEILRLWVASSDYQSDLKIS-QNILKQVAENY 659


>gi|313891853|ref|ZP_07825458.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119847|gb|EFR43034.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 823

 Score = 40.7 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           RK       +          K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 12  RKWQKYWYDTKSFKVEIDENKPKYYVLEMF-PYPSGNLHMGHVRNYSIGDVIARFKKMQG 70

Query: 159 YEV 161
           + V
Sbjct: 71  FNV 73


>gi|123967106|ref|YP_001012187.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123201472|gb|ABM73080.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 918

 Score = 40.7 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    + K    +V +  LV   RD    KMSK AG+
Sbjct: 507 TGFD-IIFFW-------VARMTMMGKTFTNKIPFKDVYIHGLV---RDENNKKMSKSAGN 555

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            I    ++D+ GSD++RF ++        D      ++    + V
Sbjct: 556 GIDPLLLIDKYGSDALRFALIREVAGAGQDIRLDFDRKNDTSSTV 600



 Score = 38.0 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 76/242 (31%), Gaps = 27/242 (11%)

Query: 91  LYL---SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
             L   SPS + K       S   +  +   KG    I     N TG +H+GH   + + 
Sbjct: 8   FTLKNYSPSEVEKKWQKQWDSLRAFSPDSRDKGEPFCIVIPPPNVTGSLHMGHAFNSSLI 67

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           D +       G  V         G    ++A+      Q      +S    G        
Sbjct: 68  DVIIRFQRLLGKNVLCLP-----GTDHASIAVQTILEKQLKNEGKNS----GDIGREDFL 118

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-KALNIQHDIFISEDDFH 266
                  ++   ++++  +     +  +     + + + + + +A NI HD  +     +
Sbjct: 119 KRAWIWKEQSGGKIVSQLKRIGYSVDWERERFTLDEKLNEAVIEAFNILHDKKL----IY 174

Query: 267 RGDP---------SPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           RG+          S + D+   +    G+++    P          +          T++
Sbjct: 175 RGEYLVNWCPASQSAVSDLEVEMQEVNGHLWHFKYPLISDAGQILDEYLEVATTRPETLL 234

Query: 317 GD 318
           GD
Sbjct: 235 GD 236


>gi|219847645|ref|YP_002462078.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541904|gb|ACL23642.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 1066

 Score = 40.7 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L AV+  + ++ A  NV+    + L +DG   KMSK  G+ I  + V++  
Sbjct: 569 DQTRGWFYTLHAVSTLLFDRPAFKNVICLGHI-LDKDGQ--KMSKSRGNVIEPQEVINAY 625

Query: 418 GSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           G D++R ++           F    V E  ++          F+V YA  
Sbjct: 626 GVDALRWYLFTAAPPGNARRFSMDLVSESMRKFLLTLWNTYAFFVTYANL 675


>gi|50553903|ref|XP_504360.1| YALI0E24607p [Yarrowia lipolytica]
 gi|49650229|emb|CAG79959.1| YALI0E24607p [Yarrowia lipolytica]
          Length = 1095

 Score = 40.7 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 113/355 (31%), Gaps = 46/355 (12%)

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
           +A   N+ + P     G         +        +++ EE+W    +       M +  
Sbjct: 522 EAFTYNEPEGPVTSRSGDDC------IVSLEDQWYMDYGEEQWKE--RALECLEQMNVFS 573

Query: 247 DD----LKALNIQHDIFISEDDFHRGDPSPIRD--IIDNLARQGYVYEGILPPPKSKTTQ 300
           ++     K        +     +  G   P  D  ++++L+                +  
Sbjct: 574 EETRNQFKGTLGWLKNWALSRTYGLGTKIPWDDKYLVESLSDSTIYMAYYTIAHFLHSDI 633

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY-TYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +        +    M  D  D   L+SD       AA L   + +++  +   I V G D
Sbjct: 634 EGQKPGLLNVTPEDMTDDVFDYVFLRSDTKPEGLDAAKLDAMRREFDYFYPVDIRVSGKD 693

Query: 360 -HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
               ++        A+  K+     +      L       KMSK  G+F+TL+ +V++ G
Sbjct: 694 LIPNHLTFFIYCHTAMFPKRVWPKGIRANGHLLLN---HEKMSKSTGNFMTLKQIVEKFG 750

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           +D+ R   L        D +F +    +          A  R  ++   A+++  D    
Sbjct: 751 ADASRIA-LADAGDTFEDANFDEANANA----------AILRLYTLKEWAEEMVKDTSLR 799

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL-ASVF 532
               N + Q  E +      +  L      IE A           Y Y L + +F
Sbjct: 800 TDGNNFLDQTFENE------MNML------IEEAAAHYAE---CNYKYALKSGLF 839


>gi|145223217|ref|YP_001133895.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315443675|ref|YP_004076554.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215703|gb|ABP45107.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261978|gb|ADT98719.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 900

 Score = 40.7 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 62/214 (28%), Gaps = 33/214 (15%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +   L    V    +  +        +I     N TG +H+GH     + D L   
Sbjct: 25  DPGTVESDLYDGWVEAGYFTADPSSDKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRR 84

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYEV            ++   ++     ++ L   D    E +   +++       
Sbjct: 85  KRMQGYEVL-------WLPGMDHAGIATQSVVEKQL-AADGKTKEDFGRELFI------- 129

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK                 K  S   +   +R     ++   D F  +D   R     +
Sbjct: 130 -DKVWD-------------WKRESGGTIGAQMRRIGDGVDWSRDRFTMDDTLSR----AV 171

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           R I   L   G +Y+       S   +    D +
Sbjct: 172 RTIFKRLFDAGLIYQAERLVNWSPVLETAISDLE 205



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 62/204 (30%), Gaps = 45/204 (22%)

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           NV L  L+   RD    KMSK  G+ I     V+  G+D++RF +               
Sbjct: 537 NVFLHGLI---RDEFGRKMSKSRGNGIDPLDWVETFGADALRFTLAR------------- 580

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF----PRNVIPQESEFDTSELQ 497
                  +P   +       R+    A  +F    F L     P  + P     D     
Sbjct: 581 -----GASPGGDLAIGEDHARASRNFATKLFNATRFALLNGASPAPLPPTAELTDADRW- 634

Query: 498 LIVHLAEYPRV---IENATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNR 553
               L     V   ++ A    E  +    LY  A   F   +        L  VQ    
Sbjct: 635 ---ILGRLEEVRADVDAALDNYEFNRACEALYHFAWDEFCDWY------LELAKVQLGQE 685

Query: 554 KLTMMRLQLVHAVASIINSGLNII 577
                R        +++ + L+++
Sbjct: 686 DPQTAR------TTAVLATVLDVL 703


>gi|302391369|ref|YP_003827189.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203446|gb|ADL12124.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 828

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K         +        K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 12  EKWQQYWEEEQLFETELDPDKPKHYTLEMF-PYPSGNLHMGHVRVYSIGDVIARFKRMQG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 30/171 (17%)

Query: 354 YVMGSDHS-GY-----VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           YV G +H+  +               +++ K     LL + + L +DG   KMSK  G+ 
Sbjct: 534 YVGGIEHAILHLLYARFFMKFISDLGIADAKEPFERLLAQGMVL-KDGA--KMSKSKGNV 590

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           +    ++D  G+D+ R  ML+    +    D     E  K    F       R   +  +
Sbjct: 591 VDPLEIIDNYGADTARLFMLFAAPPQK---DLEWDDEGVKGASRFL-----DRVWRVTAE 642

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV--HLAEYPRVIENATIAQ 516
             D   ++D D    +        D SE +L    HLA     I++ T   
Sbjct: 643 YTDQIKEIDLDNLQID------NLDKSEKELYRSVHLA-----IKDVTEDL 682


>gi|254294064|ref|YP_003060087.1| glutamyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042595|gb|ACT59390.1| glutamyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 490

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 55/298 (18%), Positives = 91/298 (30%), Gaps = 45/298 (15%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGA 172
              I   + +PTG +H+G  R A+          G  L  +      +  RE        
Sbjct: 1   MTVITRFAPSPTGYLHIGGARTALFNWLYAKANNGKFLLRI-----EDTDRE-----RST 50

Query: 173 QINTLAL--SVFWRYQQALYNNDSDLPEGYYPGVYLKH-VGKELADKYSSELLNFPEEKW 229
           Q    A+   + W                      ++  + K  A K  +      E + 
Sbjct: 51  QNAVQAIFEGLDWLGITPDEEPTFQFQRADRHREVVEEMISKGTAFKCYTSQEELAERRE 110

Query: 230 LPIVKDYSVQAMMKIIRDDLK-ALNIQHDIFIS-EDDFHRGDPSPIRDIIDNLARQGYVY 287
               K    +   K   +DL   L  + D  ++     +R   +P              Y
Sbjct: 111 QGEAKRADAKIAAKEGNEDLASNLRAEADKLLAPYRSPYRDGKTPTDP--------NASY 162

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P     +  D  +  +   +   G   D  LL++DG+ TY    +A     ++ 
Sbjct: 163 VVRLRAPDEGRIEFTDDVQGHVGVSA---GQIDDLILLRTDGTPTYM---IAVVVDDHDM 216

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           G   +I   G DH G   R   +  A+     +        V L       K+SKR G
Sbjct: 217 GVTQVIR--GDDHLGNTYRQIPIYQAMGWDLPK-----YAHVPLIHGPDGKKLSKRHG 267


>gi|256810734|ref|YP_003128103.1| lysyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793934|gb|ACV24603.1| lysyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 530

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 116/330 (35%), Gaps = 35/330 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
               P+G +HVG+ R  +  D +   +   G +    + I D    +  L   +   ++Q
Sbjct: 24  SGITPSGHIHVGNARETLTADAIYKGLINKGVDAELIF-IADTYDPLRKLYPFLPKEFEQ 82

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            +    S++P         +   K  A+ + S  L   ++  + +    + +   K + D
Sbjct: 83  YIGMPLSEIP-------CPEGCCKSYAEHFLSPYLESLDDLGVELTTYRADENYKKGLYD 135

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +   + + +   I E   ++   SP+ D    +     V E              D +++
Sbjct: 136 EKIKIALDNREKIME-ILNKFRASPLPDDWWPI---NVVCENCGRLKT--KVLSYDSEKE 189

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI-YV----MGSDHSG 362
            + +R  + G + +    K            A    + +      I  V    MG DH+ 
Sbjct: 190 IVRYRCEVCGYEGEVKPYKGR----------AKLPWRVDWPARWSIFNVTIEPMGKDHAA 239

Query: 363 ----YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
               Y   +       + +  +  V   E ++L      I MS   G    ++       
Sbjct: 240 AGGSYDTGVLIAKEIYNYEPPKKVV--YEWIQLKVGDKAIPMSSSKGVVFAVKDWTHIAH 297

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            + +RF++L  K ++ +DFD  K+ +   E
Sbjct: 298 PEILRFLLLRSKPTKHIDFDLKKIPDLVDE 327


>gi|227497475|ref|ZP_03927704.1| valine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833049|gb|EEH65432.1| valine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 1002

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 27/185 (14%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++D+ GSD+VR+     +      F+  ++K   +      
Sbjct: 687 DSDHKKMSKSKGNVVTPMGLLDKYGSDAVRYWAASARLGLDPAFEEAQIKVGRRL----- 741

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-----FDTSELQLIVHLAEYPRV 508
                 +  +  + A  +    D D      +P  S       +  +  ++  LA     
Sbjct: 742 ----AIKVLNASKFALSMGVPWDADEATLAAVPAPSLDVTKVTEPIDRAVLAALAGVVDT 797

Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN-------RKLTMMRLQ 561
              A    E +  A    +    F   W+   +   L   +AN+         +   R  
Sbjct: 798 ATAAFDRYE-H--AR-ALEATESF--FWTFCDDYIELVKDRANDFEGTHDAAAVASARTT 851

Query: 562 LVHAV 566
           L  AV
Sbjct: 852 LAIAV 856


>gi|126175469|ref|YP_001051618.1| leucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|307301993|ref|ZP_07581751.1| leucyl-tRNA synthetase [Shewanella baltica BA175]
 gi|125998674|gb|ABN62749.1| leucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|306914031|gb|EFN44452.1| leucyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 874

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 21  NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 80

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 81  QRLQGKNV 88


>gi|113475381|ref|YP_721442.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964993|sp|Q114V5|SYL_TRIEI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110166429|gb|ABG50969.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 929

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + +          +    +     K     +   P+G +H+GH R   + D +A L
Sbjct: 6   NPVSIEQKWQKNWAEQNQDQTPINNNQPKFYALSMFPYPSGNLHMGHVRNYTITDVIARL 65

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 66  KRMQGYRV 73


>gi|332663919|ref|YP_004446707.1| Isoleucyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332733|gb|AEE49834.1| Isoleucyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1094

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 121/347 (34%), Gaps = 51/347 (14%)

Query: 147 GDTLASLMAFSGYEVTREYYINDAGA---QINTLALSVFWRYQQALYNND---------- 193
           G  +A +  F+G       Y+ D G        + + +  + +  L+ ++          
Sbjct: 380 GRFVAEVTDFAGR------YVKDYGQVEEHAVDVDIVIKLKEEDKLFGSEKYVHSYPHCW 433

Query: 194 -SDLPEGYYPGV--YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250
            +D P  YYP    ++K    +      ++ +N+             ++ +        +
Sbjct: 434 RTDRPVLYYPLDSWFIKASSMKERMFELNQTINWKPAATGEGRFGKWLENLQDWNLSRSR 493

Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-----D 305
              I   I+ S+D         I+++ + +++   V       PK       D      D
Sbjct: 494 YWGIPLPIWRSKDGTQEKCIGSIQELQNEISKANAVLGKTQEVPKDLHRPYIDEIVLVAD 553

Query: 306 RKQLLFRSTMVGDDVDRPLLKSD----GSYTYFAADLAYFKCKYERGFDNMIYVMGSDH- 360
             + L+R   + D        S       + Y   +   F+ +Y   F       G D  
Sbjct: 554 NGEALYRELDLID----VWFDSGSMPYAQWHYPFENQDKFRFRYPADF----IAEGVDQT 605

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+   L A+A  V +  A  NV+   LV    D    KMSKR G+       V + G+D
Sbjct: 606 RGWFYTLHAIAVMVFDSVAFKNVVSNGLV---LDKNGQKMSKRLGNAADPFETVAKYGAD 662

Query: 421 SVRFMMLWR-KNSELLDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           + R+ M+   +  + L FD   ++E  ++          F+  YA  
Sbjct: 663 ATRWYMISNAQVWDNLRFDLAGIEETQRKLFGTLYNTYSFFTLYANI 709


>gi|332159288|ref|YP_004424567.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034751|gb|AEC52563.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 967

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 65/205 (31%), Gaps = 31/205 (15%)

Query: 89  INLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N   +   + +K L + +    E       K  K  I       +G +HVGH R   + 
Sbjct: 4   VNFRAIEEKWQKKWLEAKI---FEPNIKDKPKEKKFYITVAFPYLSGHLHVGHARTYTIP 60

Query: 148 DTLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D +A      GY V     ++I   G+ I  +A  +  R    ++          Y  VY
Sbjct: 61  DVIARFKRMQGYNVLFPMAWHI--TGSPIVGIAERIKNRDPHTIW---------IYKEVY 109

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                          L +F +   + IVK +   A    IR      ++           
Sbjct: 110 KVPE---------DILWSFEDP--VNIVKYFMKAAKETFIR---AGFSVDWSREFYTTSL 155

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGI 290
                  I      L  +GY+ +G 
Sbjct: 156 FPPFSKFIEWQFWKLKEKGYIVKGA 180


>gi|331085226|ref|ZP_08334312.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408009|gb|EGG87499.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 485

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 107/291 (36%), Gaps = 32/291 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A      G +        D    ++  AL + +R  + 
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIA---KHEGGDFMLRIEDTDQERFVDG-ALEIIYRTLEK 64

Query: 189 LYNNDSDLPE-GYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                 + P+     G Y++       +  KY+ +L++  +  +        ++++   +
Sbjct: 65  TGLIHDEGPDKDGGVGPYVQSERQAMGIYMKYAKQLIDQGD-AYYCFCDKERLESLKSKV 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    +       +             ++ I+     G  Y   +  P   TT   D  
Sbjct: 124 SESGTEIVAYDKHCLHLS----------KEEIEANLAAGKPYVIRINMPTEGTTTFHDDI 173

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             ++   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 174 YGEITVPNEELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEYLSSAP 225

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A   +      + C L+    +    K+SKR+G   +   ++++
Sbjct: 226 KYNRLYEAFGWEIP--TYVHCPLIT---NEEHKKLSKRSGHS-SYEDLLEQ 270


>gi|329767449|ref|ZP_08258974.1| valyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836138|gb|EGF85829.1| valyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +     +  +    +  +   K     I     N TG +H+GH     + D L   
Sbjct: 9   NPTEVENNRYNWWLEKEVFKADNKSKKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++V   Y        ++   +S   + +  +             G+    +G+E 
Sbjct: 69  KRLKGFDVL--YLPG-----MDHAGISTQAKVEAKMREE----------GLSRYDLGRE- 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E  W         +     IR     L +  D          G    +
Sbjct: 111 ---------KFLERAW------EWKEEYAGYIRAQWAKLGLGLDYSRERFTLDEGLNKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
             I  +    G +Y G
Sbjct: 156 TKIFVDHYNNGTIYRG 171



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ +    V+++ G+DS+R+ +           D     E+ + + 
Sbjct: 515 LVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQ---DLRYSTEKIEASW 571

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            +  +   A    I     + F   D DL     +  +        +L   + ++ R+ E
Sbjct: 572 NYINKIWNASRFVIMN--LEGFEYSDIDLTGEKTLADKYILT----KLAKTIEDFERLFE 625

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                 E  ++   LY+     F   +    E  ++     +       +  LV+    +
Sbjct: 626 K-YEFGEASRI---LYNFVWEEFCSWY---IEIAKISLNGEDEAAKKTTKSILVY----V 674

Query: 570 INSGLNII 577
           +++ L ++
Sbjct: 675 LDASLKML 682


>gi|309807047|ref|ZP_07701027.1| leucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166543|gb|EFO68742.1| leucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|302336827|ref|YP_003802033.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634012|gb|ADK79439.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 806

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 15/112 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  Y+   L     K     D +       +YV G++H+     Y +    V   +   
Sbjct: 502 GSCWYYLRYLDPHNDKKFASRDKIDYWMPVDLYVGGAEHAVLHLLYSRFWHKVLHEIGAV 561

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
                   L+ + + L   G  +KMSK  G+ I    ++ E G+DS+R   +
Sbjct: 562 NTTEPFQRLVNQGMILGEGG--VKMSKSLGNVINPDDIIKEYGADSMRVYEM 611


>gi|254485966|ref|ZP_05099171.1| short-chain dehydrogenase/reductase SDR [Roseobacter sp. GAI101]
 gi|214042835|gb|EEB83473.1| short-chain dehydrogenase/reductase SDR [Roseobacter sp. GAI101]
          Length = 289

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 35  ERPRDCAHGHLSTNAAMI---LSRPLG----LDPLTIAELIVARIKIDPDVDSVF 82
           +  R+  +G  +   AM    L+  L       P  IAE + A + + P  +  F
Sbjct: 195 DPTREAEYGDFAAVPAMSNTALAEMLKATPQQRPEQIAEAVAALLDM-PFGEKPF 248


>gi|149192007|ref|ZP_01870235.1| leucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834143|gb|EDL51152.1| leucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 513

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIERNVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|124485569|ref|YP_001030185.1| glutamyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|187645675|sp|A2SRG2|SYE_METLZ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|124363110|gb|ABN06918.1| glutamyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 560

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 107/353 (30%), Gaps = 53/353 (15%)

Query: 54  SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113
           ++ +      I E + A + I+   + +         + L+P  + K+          + 
Sbjct: 45  AKEINALIPEILEEVAA-LSIEEREEKL---------MSLNPGAIEKM---HEKKERSHE 91

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
              +       +   + NP+GP+H+GH R +V+ D         G +    Y + D    
Sbjct: 92  LPDLPNAESGVVMRFAPNPSGPLHLGHARASVLNDYYV---KKYGGKFY--YRVED--TD 144

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              +  S +    + L      + +  Y           +  +Y+ +LL      ++   
Sbjct: 145 PKRVDPSAYEMVSEDLAWLGIGITDVVYQSDR-----FAIYYEYARKLLELGG-AYMCTC 198

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
            +       +     LK +         E++  R D     D++     +G +   +   
Sbjct: 199 DN------NEFREKKLKKIACPCREISVEENLKRFD-----DMLAGKYAEGEI--TLRVK 245

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
                      D   +   ++           +    + Y   + +     +  G  ++I
Sbjct: 246 TDIAHPDPAVRDFAAMRVLTSTPHP-------RKPAIFVYPLMNFSVAVDDHLLGMTHVI 298

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK-RAG 405
              G DH    +R E +      K            R+   G+ +  S  R G
Sbjct: 299 R--GKDHIANTRRQEYIYNYFGWKMPY----FYHYGRMSIAGLELSTSGMRKG 345


>gi|160876553|ref|YP_001555869.1| leucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160862075|gb|ABX50609.1| leucyl-tRNA synthetase [Shewanella baltica OS195]
          Length = 874

 Score = 40.7 bits (94), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 21  NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 80

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 81  QRLQGKNV 88


>gi|329919670|ref|ZP_08276648.1| leucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328937322|gb|EGG33746.1| leucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|312873594|ref|ZP_07733641.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090847|gb|EFQ49244.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|309803462|ref|ZP_07697556.1| leucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164471|gb|EFO66724.1| leucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 804

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRAG 405
           YV G++H+     Y +    V   +     +         +LY  G+      KMSK  G
Sbjct: 525 YVGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQKLYNQGLILKDHEKMSKSRG 579

Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           + +    +V+E G+DS+R + M        +D+D
Sbjct: 580 NVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|307719502|ref|YP_003875034.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
           6192]
 gi|306533227|gb|ADN02761.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
           6192]
          Length = 702

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 88/310 (28%), Gaps = 31/310 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +  D L   +  +GY +     + D G                     D  +
Sbjct: 270 HIGNLRTYIFEDVLRRTLLHAGYRLVHVMNVTDVG-----------HLTSDGDEGEDKVI 318

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +     +  +      ++   + K       M  +   L+     H
Sbjct: 319 KAARERGMSVWEIAEFFTRAFFEDTDKLNIQRPEIVCKATEHIPEMIDLVKRLEERG--H 376

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                 + ++     P    +  L  Q                 K       L F  +  
Sbjct: 377 TYLAGGNVYYDISTFPRYGELARLDEQDL----RAGARVGVDAHKRSPRDFVLWFTRSKF 432

Query: 317 GDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG-YVKRLEAVAA 372
                  D P  +  G   +     A         FD  I+  G DH   +     A + 
Sbjct: 433 EHQAMVWDSPWGR--GYPGWHLECSAMSMKYLGEQFD--IHCGGVDHIPVHHTNEIAQSE 488

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV--RFMMLWRK 430
             + K   +   L     +   G   KMSK  G+F+TL  + +E G   +  R+  L   
Sbjct: 489 GATGKHPWVRYWLHAEFLVMDSG---KMSKSKGNFLTLSGLEEE-GFHPLDYRYFCLGAH 544

Query: 431 NSELLDFDFC 440
               L F + 
Sbjct: 545 YRSQLFFSWE 554


>gi|241889659|ref|ZP_04776957.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863281|gb|EER67665.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 56/196 (28%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +     +  +    +  +   K     I     N TG +H+GH     + D L   
Sbjct: 9   NPTEVENNRYNWWLEKEVFKADNKSKKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRY 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++V   Y        ++   +S   + +  +             G+    +G+E 
Sbjct: 69  KRLKGFDVL--YLPG-----MDHAGISTQAKVEAKMREE----------GLSRYDLGRE- 110

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                     F E  W         +     IR     L +  D          G    +
Sbjct: 111 ---------KFLERAW------EWKEEYAGYIRAQWAKLGLGLDYSRERFTLDEGLNKAV 155

Query: 274 RDIIDNLARQGYVYEG 289
             I  +    G +Y G
Sbjct: 156 TKIFVDHYNNGTIYRG 171



 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L RD    KMSK  G+ +    V+++ G+DS+R+ +           D     E+ + + 
Sbjct: 515 LVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQ---DLRYSTEKIEASW 571

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
            +  +   A    I     + F   D DL     +  +        +L   + ++ R+ E
Sbjct: 572 NYINKIWNASRFVIMN--LEGFEYSDIDLTGEKTLADKYILT----KLAKTIEDFERLFE 625

Query: 511 NATIAQEPYKLAFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
                 E  ++   LY+     F   +    E  ++     +       +  LV+    +
Sbjct: 626 K-YEFGEASRI---LYNFVWEEFCSWY---IEIAKISLNGEDEAAKKTTKSILVY----V 674

Query: 570 INSGLNII 577
           +++ L ++
Sbjct: 675 LDASLKML 682


>gi|304410296|ref|ZP_07391915.1| leucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|189083228|sp|A3D7N6|SYL_SHEB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|304351705|gb|EFM16104.1| leucyl-tRNA synthetase [Shewanella baltica OS183]
          Length = 859

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|325189643|emb|CCA24128.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 930

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 72/210 (34%), Gaps = 29/210 (13%)

Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK-IIRDDLKALNIQHDIFIS 261
           G Y++     L   Y+S LL      +        +Q + +  IR+    +  +  + +S
Sbjct: 14  GPYVQSERLTLYHSYASTLLQ--AHAYRCFCSSGRLQKLRESQIREGKATMYDRACLHLS 71

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
           E +                  +G  +   L  PK KT  K  +        ST+     D
Sbjct: 72  EKEISNRM------------ERGDTHTIRLKIPKGKTIVKDMLRGYVQFAHSTLD----D 115

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           + LLKSDG  TY    LA     +     ++I   G +      +   +  A+     + 
Sbjct: 116 QILLKSDGYPTYH---LANVVDDHLMKISHVIR--GEEWLPSTPKHILLYKALGIPPPEF 170

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              L  L+   R     K+SKR GD     
Sbjct: 171 GH-LGLLLNEDRS----KLSKRQGDVAVED 195


>gi|288958449|ref|YP_003448790.1| glutamyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910757|dbj|BAI72246.1| glutamyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 468

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 20/105 (19%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D  LL++DG+ TY    LA     ++ G  ++I   G DH     R   +  A+     +
Sbjct: 170 DLILLRADGTPTYL---LAVVVDDHDMGVTHVIR--GDDHLTNTFRQIQIFNAMGWDLPR 224

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
                   + L       K+SKR G           +G D+ R M
Sbjct: 225 FGH-----IPLIHGPDGAKLSKRHG----------ALGVDAYRDM 254


>gi|284048004|ref|YP_003398343.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952225|gb|ADB47028.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 829

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +             Y  +      K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 11  IEARWQQYWEDNKTYQVSNEDPRPKSYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMR 70

Query: 158 GYEV 161
           G+ V
Sbjct: 71  GFNV 74


>gi|217972285|ref|YP_002357036.1| leucyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782513|sp|B8E4X7|SYL_SHEB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217497420|gb|ACK45613.1| leucyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 859

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|189083229|sp|A6WRJ9|SYL_SHEB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|114765738|ref|ZP_01444836.1| leucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541955|gb|EAU44990.1| leucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 856

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +     +     + +         K  +  +   P+G +H+GH R   +GD +A
Sbjct: 3   RYDPATIEPKWQAAWDEALTFKATRTADKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIA 62

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 63  RYKKQNGFNV 72


>gi|46446869|ref|YP_008234.1| cysteinyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|61216206|sp|Q6MBU0|SYC_PARUW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46400510|emb|CAF23959.1| putative cysteinyl tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 478

 Score = 40.7 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 122/354 (34%), Gaps = 64/354 (18%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +  +       KG  + +           H+G+ R  +  D L   + F G+ +T+ 
Sbjct: 14  YNTAERQKQELKPIKGNHIQLYTCGPTVYHYAHIGNFRTYIFEDLLRRTIQFFGFSITQV 73

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--L 222
             + D                      +D  +      G+ L    K   D +  +L  L
Sbjct: 74  MNLTDV---------------------DDKTIRGAIAKGITLDEYTKPYKDAFFEDLKTL 112

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           N    ++ P   DY + AM+++I+  L                ++G    I   I+   R
Sbjct: 113 NIQSAEYYPAATDY-IPAMIEMIKVLLDK-----------KVAYKGGDGSIYYAINQFPR 160

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQ-------LLFRSTMVGDDVDRPLLKSDG----SY 331
            G +    L   ++  +++   D  +       +L++S     D         G     +
Sbjct: 161 YGCLSHLHLEDLQAGASERVAADEYEKEHVADFVLWKSYDSERDGQIYWESPFGLGRPGW 220

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLC 386
               + +A        G    I+V G D     H   + + EA +    +K   + +   
Sbjct: 221 HLECSAMAMHL----LGETIDIHVGGIDNMFPHHENEIAQSEACS---GKKFVNLWMHAE 273

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMMLWRKNSELLDFDF 439
            LV   +     KMSK  G+F TLR ++++  +   VR+++L       L+F F
Sbjct: 274 HLVVDQK-----KMSKSLGNFYTLRDLLNKGFTGIQVRYLLLQTHYKTQLNFTF 322


>gi|329121046|ref|ZP_08249677.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471208|gb|EGF16662.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 828

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           RK       +          K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 17  RKWQKYWHDTKSFKVEIDENKPKYYVLEMF-PYPSGNLHMGHVRNYSIGDVIARFKKMQG 75

Query: 159 YEV 161
           + V
Sbjct: 76  FNV 78


>gi|313639764|gb|EFS04513.1| glutamyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 491

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 99/307 (32%), Gaps = 41/307 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NVEDGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G Y     + + + L  K   E L +   K    
Sbjct: 61  QMKNL----KWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQKLLDEGLAY---KCYCT 113

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            ++   +   +    ++   + +      E                    QG+       
Sbjct: 114 EEELEAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRFK 160

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P ++T    DM ++ + F S  +GD     + K DG  TY   + A     +     ++
Sbjct: 161 VPANETITFNDMVKEDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISHV 214

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +   G DH     +   +  A   +      +      L  +    K+SKR G  I    
Sbjct: 215 LR--GDDHISNTPKQLLIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFIE 267

Query: 413 VVDEVGS 419
              ++G 
Sbjct: 268 QYRDLGY 274


>gi|313635087|gb|EFS01436.1| glutamyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 491

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 99/307 (32%), Gaps = 41/307 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NVEDGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G Y     + + + L  K   E L +   K    
Sbjct: 61  QMKNL----KWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQKLLDEGLAY---KCYCT 113

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            ++   +   +    ++   + +      E                    QG+       
Sbjct: 114 EEELEAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRFK 160

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P ++T    DM ++ + F S  +GD     + K DG  TY   + A     +     ++
Sbjct: 161 VPANETITFNDMVKEDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISHV 214

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +   G DH     +   +  A   +      +      L  +    K+SKR G  I    
Sbjct: 215 LR--GDDHISNTPKQLLIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFIE 267

Query: 413 VVDEVGS 419
              ++G 
Sbjct: 268 QYRDLGY 274


>gi|289433591|ref|YP_003463463.1| glutamyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169835|emb|CBH26373.1| glutamyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 491

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 99/307 (32%), Gaps = 41/307 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NVEDGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
           Q+  L     W         D     G Y     + + + L  K   E L +   K    
Sbjct: 61  QMKNL----KWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQKLLDEGLAY---KCYCT 113

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            ++   +   +    ++   + +      E                    QG+       
Sbjct: 114 EEELEAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRFK 160

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P ++T    DM ++ + F S  +GD     + K DG  TY   + A     +     ++
Sbjct: 161 VPANETITFNDMVKEDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISHV 214

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +   G DH     +   +  A   +      +      L  +    K+SKR G  I    
Sbjct: 215 LR--GDDHISNTPKQLLIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFIE 267

Query: 413 VVDEVGS 419
              ++G 
Sbjct: 268 QYRDLGY 274


>gi|166064260|gb|ABY79059.1| glutamyl-tRNA synthetase [endosymbiont of Ridgeia piscesae]
          Length = 417

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 88/291 (30%), Gaps = 54/291 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG+ R A++   +A     +G            G  +  L  +   R  + 
Sbjct: 7   APSPTGYIHVGNLRTALMNYLIA---KKAG------------GTFVLRLDDTDPERSTEE 51

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             +   +  +             E  D+Y+           L    +  V+        D
Sbjct: 52  YADAIKEDLQWLGLNWDRVEKQSERLDRYNEAADELRASGRLYECFETPVEL-------D 104

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           LK   +           + G P         L       +  L   +     +  +D+++
Sbjct: 105 LKRKKL----------LNMGKPPVYDRAALELTD---AEKDALRKERGAGHWRFKLDQER 151

Query: 309 LLFRSTMVGDD-------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDH 360
           + F   ++GD         D  L++ DG + Y    LA      + G   + YV+ GSDH
Sbjct: 152 IEFTDGILGDLSIDAASVSDPVLIRGDGQFLYT---LASVCDDIDYG---ITYVVRGSDH 205

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                    +  A+                L        +SKR G      
Sbjct: 206 VTNTATQIQIIQALGGTVPSFAHH-----SLLTGPQGEALSKRLGTLALRD 251


>gi|260429181|ref|ZP_05783158.1| leucyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260419804|gb|EEX13057.1| leucyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 856

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +           + +         K  +  +   P+G +H+GH R   +GD +A
Sbjct: 3   RYDPATIEPKWQQAWEKALTFKAARAADKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIA 62

Query: 152 SLMAFSGYEV 161
                +G+ V
Sbjct: 63  RYKKQNGFNV 72


>gi|189083230|sp|A9L001|SYL_SHEB9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|315268747|gb|ADT95600.1| leucyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 859

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|168182947|ref|ZP_02617611.1| glutamate--tRNA ligase [Clostridium botulinum Bf]
 gi|182673919|gb|EDT85880.1| glutamate--tRNA ligase [Clostridium botulinum Bf]
          Length = 485

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 97/295 (32%), Gaps = 47/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E  +         L +
Sbjct: 10  APSPTGYMHVGNLRTALYAYLIAKHDNGDFILRI-----EDTDQERLVE------GALDV 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                    L +++     G   G Y++   + +  +Y+ +L+   E             
Sbjct: 59  IYNTLKITDLSHDEGP-DIGGPVGPYVQSERRNIYIEYAEKLIEKGEA------------ 105

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
                 ++ L  L    +       + +      ++ I     +G  Y      P + +T
Sbjct: 106 YYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIAKKIAEGVPYVIRQKNPTTGST 165

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D     +   S    +  D  L+KSDG  TY   + A     +  G  ++  V GS+
Sbjct: 166 SFHDEIYGDI---SVDNSELDDMILIKSDGLPTY---NFANVVDDHLMGITHV--VRGSE 217

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           +     +   +  A         V +             K+SKR GD  +   ++
Sbjct: 218 YLSSSPKYNRLYEAFGWD-----VPIYVHCPPIMKDEHHKLSKRNGDA-SFEDLM 266


>gi|159031023|emb|CAO88726.1| leuS [Microcystis aeruginosa PCC 7806]
          Length = 850

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K        G++       K     +      P+G +H+GH R   + D +A L    G
Sbjct: 10  QKWQKIWQQMGLDKTPENADKPKFYALSMF-PYPSGNLHMGHVRNYTITDVIARLKRMQG 68

Query: 159 YEV 161
           Y V
Sbjct: 69  YRV 71


>gi|170739699|ref|YP_001768354.1| leucyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168193973|gb|ACA15920.1| leucyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 871

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
              +      +   RN   + T   +E     P+G +H+GH R   +GD +A      G+
Sbjct: 13  HWQAVWAERDLFRTRNEDPRPTYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYKRAKGF 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|269795721|ref|YP_003315176.1| valyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097906|gb|ACZ22342.1| valyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 906

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 60/192 (31%), Gaps = 42/192 (21%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   +++E GSD+VR+     +      F+  ++K   +      
Sbjct: 604 DPDRKKMSKSKGNVVTPMGLLEEHGSDAVRYWAASARLGTDAAFEVGQMKIGRR------ 657

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                     +   +K        D    +        D +       LA    V++ AT
Sbjct: 658 ------LAIKVLNASKFALSFAGDDDLVLDPALVTEPIDRA------MLAGLADVVDRAT 705

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVHAV 566
            A E      Y      +++  F   W+   +   L   R   A                
Sbjct: 706 SALE-----GYDHTKALEVSETF--FWTFCDDYLELVKDRAYGAGAEAT--------DVT 750

Query: 567 ASII--NSGLNI 576
           A  +   +GL I
Sbjct: 751 AETLSARTGLAI 762


>gi|167906817|ref|ZP_02494022.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 878

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 73/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 525 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 584

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A     
Sbjct: 585 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGHA 627

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D  G+D +R  +     +  +   
Sbjct: 628 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRGADILRLWIASTDYAAEMSIS 684

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 685 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 732

Query: 499 IV 500
             
Sbjct: 733 AR 734


>gi|151940903|gb|EDN59285.1| leucyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 894

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + +       SG+     L      +  +F    P+G +H+GH R  V+ D+L      
Sbjct: 25  AIGEKWKQKTTSGLPKQNTLNSGSKYILCQF--PYPSGALHIGHLRVYVISDSLNRFYKQ 82

Query: 157 SGYEVT 162
            GY V 
Sbjct: 83  KGYNVI 88


>gi|110596870|ref|ZP_01385160.1| isoleucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341557|gb|EAT60017.1| isoleucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 1085

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +K A  N+++   +    D    KMSK  G+ +     + 
Sbjct: 585 GVDQTRGWFYTLHAIATLIFDKPAYRNLIVNGHI---LDKNGQKMSKSKGNVVDPFETMG 641

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             G+D++R ++M+         F+  +++E+ ++       +  F+V YA
Sbjct: 642 RYGADALRWYLMVTSPPWRPKSFNADEIEEEQRKFFRAFINSYNFFVLYA 691


>gi|86147931|ref|ZP_01066235.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834256|gb|EAQ52410.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 686

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQNETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGAGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFIKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  + +R+    + NS + D D        + N
Sbjct: 348 NHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|84394346|ref|ZP_00993068.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375039|gb|EAP91964.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 686

 Score = 40.7 bits (94), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQNETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGAGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFIKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  + +R+    + NS + D D        + N
Sbjct: 348 NHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|294340556|emb|CAZ88941.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Thiomonas sp.
           3As]
          Length = 946

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 41/221 (18%)

Query: 93  LSPSYLRKILSSIVVSGIE----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           L+ S+    + +      E    +   L        ++    N TG +H+GH     V D
Sbjct: 4   LAKSFEPHNIEARWTQRWEELGVFAPTLDAAKPSFCVQLPPPNVTGTLHMGHAFNQTVMD 63

Query: 149 TLASLMAFSGYEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
           TL       G        ++ AG   QI      V  R  QA   +  DL          
Sbjct: 64  TLVRYHRMRGDNTLWVPGMDHAGIATQI------VVERQLQAAGLSRHDLGR-------- 109

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                   DK+  ++            K  S   +   +R    +++ +H+ F  +D   
Sbjct: 110 --------DKFVEKVWE---------WKQQSGNTITGQMRRMGDSVSWEHEYFTMDDKLS 152

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     + +    L  QG +Y G          +    D +
Sbjct: 153 K----AVVETFVQLYEQGLIYRGKRLVNWDPVLKSAVSDLE 189


>gi|289422687|ref|ZP_06424527.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156866|gb|EFD05491.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 883

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELL 435
            K   +VL+  LV   RD    KMSK  G+ I    ++D+ G+D++RF ++   +    +
Sbjct: 506 DKPFEHVLIHGLV---RDSEGRKMSKSLGNGIDPLEIIDQFGADALRFTLITGNSPGNDM 562

Query: 436 DFDFCKVKEQSKEN 449
            F   +V+     N
Sbjct: 563 RFYMERVEFARNFN 576



 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 50/196 (25%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +         +  ++        I     N TG +H+GH     + DTL   
Sbjct: 9   DPKDFESRIYQDWQDKGCFKSSVNKDKKPFTIVMPPPNITGQLHMGHALDDTLQDTLIRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+E          G    ++A  V                           V   +
Sbjct: 69  KRMDGFESLWIP-----GTDHASIATEVK--------------------------VVDRI 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
             +       F  +++L     +        I + +K L    D          G    +
Sbjct: 98  KKETGKSKYEFGRQEFLKEAWKWK-DEFGGKIVNQVKKLGASCDWDRERFTMDEGCNRAV 156

Query: 274 RDIIDNLARQGYVYEG 289
                 L  +G++Y G
Sbjct: 157 TKFFVKLYEEGHIYRG 172


>gi|260363864|ref|ZP_05776616.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308114636|gb|EFO52176.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 660

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|298529743|ref|ZP_07017146.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511179|gb|EFI35082.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 834

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRN--LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
             SP  + K    I      +        +     +E     P+G +H+GH R   +GD 
Sbjct: 5   RYSPEEIEKKWQQIWEEHKTFEVTHRETDRPRYYVLEMF-PYPSGRIHMGHVRNYSIGDV 63

Query: 150 LASLMAFSGYEV 161
           +A +    GY V
Sbjct: 64  VARMKMMQGYNV 75


>gi|144900375|emb|CAM77239.1| Leucyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 858

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +              +     +E     P+G +H+GH R   +GD +A      G
Sbjct: 15  AKWQKTWEDRQSFLATEDPSRPKYFVLEMF-PYPSGRIHMGHVRNYALGDVVARYKRARG 73

Query: 159 YEV 161
           + V
Sbjct: 74  FNV 76


>gi|94969057|ref|YP_591105.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551107|gb|ABF41031.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 671

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 100/337 (29%), Gaps = 58/337 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+GH    V  D +A      G +       ++ G +I   A++     Q
Sbjct: 14  YVNARP----HIGHTYTTVACDAIARRKRMLGVDTFFLTGTDEHGQKIERSAMASGKSDQ 69

Query: 187 QALYNNDSDLPE-----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
           Q +    ++        G     +++    E      + +    +  ++   K      +
Sbjct: 70  QFVDEVSAEFRGLWDRMGLSYDKFIRTTDPEHIRGVQALIKRLQDRGYIYKGKYSGQYCV 129

Query: 242 MKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
              +  D+              +  H  +       ++    + Y  +     P+++  +
Sbjct: 130 YDELYVDVDTPGAPCPECGRPTETVHEENYFFKLSAMEEPLLKLYASDPNFIRPEARRNE 189

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM---- 356
                R  L           D  + ++   +     D              +IYV     
Sbjct: 190 VISFVRGGL----------KDLSISRTTFKWGIPVPDDPAH----------VIYVWIDAL 229

Query: 357 ----------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----------- 395
                       D   Y K   A    V ++  + + +    V +               
Sbjct: 230 CNYITALGFGSDDTKLYDKFWPADVHMVGKEIVRFHCVFWPAVLMAAGLPLPKSIVAHGW 289

Query: 396 ---MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                 KMSK  G+ +    ++D +G+D++R+ ++  
Sbjct: 290 LLFEESKMSKSRGNIVRTETILDVLGADALRYFLMRE 326


>gi|15835345|ref|NP_297104.1| glutamyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285516|ref|ZP_06194910.1| glutamyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289527|ref|ZP_06195829.1| glutamyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336913|ref|ZP_07225115.1| glutamyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878784|sp|Q9PJU7|SYE_CHLMU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|7190759|gb|AAF39540.1| glutamyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 506

 Score = 40.7 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 96/277 (34%), Gaps = 28/277 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           V+ +PTG  HVG    A+  +  A    F+G  + R     D     +    ++F   + 
Sbjct: 10  VAPSPTGDPHVGTAYMALFNEVFAR--KFNGKMILRIE-DTDQTRSRDDYEKNIFSALKW 66

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                D     G   G Y +    E+  KY+  LL            DY+ +        
Sbjct: 67  CGIRWDEGPDIGGPYGPYRQSERTEIYKKYAEILLQT----------DYAYKCFAT--PQ 114

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L+ +            + R       + +     QG  Y   L  P +  +   D  + 
Sbjct: 115 ELQEMRAVASTLGYRGGYDRRYRYLSAEEVRQREEQGQPYTIRLKVPLTGESVFEDQCKG 174

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +++F      D  D+ L+KSDG  TY  A++      +  G  +++   G +      + 
Sbjct: 175 RVVFP---WADVDDQVLVKSDGFPTYHFANV---VDDHLMGITHVLR--GEEWLSSTPKH 226

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +  A   +  Q        + L  DG   K+SKR 
Sbjct: 227 LLLYEAFGWEPPQF---FHMPLLLNPDG--SKLSKRK 258


>gi|323699090|ref|ZP_08111002.1| leucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459022|gb|EGB14887.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 833

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +    SG         +     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  KWQAIWKESGCFQVETDPSRPKYYVLEMF-PYPSGKIHMGHVRNYSIGDVVARFKTMQGF 72

Query: 160 EV 161
            V
Sbjct: 73  NV 74


>gi|331232637|ref|XP_003328980.1| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309307970|gb|EFP84561.1| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1023

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 95/316 (30%), Gaps = 53/316 (16%)

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQG--YVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           ++  E          I  IID L  +G  + ++G +       T         ++     
Sbjct: 533 LYSVETGLPLLTYESITWIIDILRDRGTDHWWQGPVEDFIPPGTPGQFTKGTDVM----D 588

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAV 374
           V  D     L SDG+     AD+                  GSD   G+ +       A 
Sbjct: 589 VWFDSGVSWLTSDGA----TADMILE---------------GSDQHRGWFQSQMLTFIAA 629

Query: 375 SEKKAQINVLLCELVRLYR--DGMPIKMSKRAGDFITLRHVVD--------EVGSDSVRF 424
           ++   + +++   +V      D    KMSK +G+ ++   ++D          G D +RF
Sbjct: 630 TQPHQRDDLVYKSVVTHGFTLDKHGRKMSKSSGNVLSPLELIDGDETKKQPGFGIDVLRF 689

Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
                  +  +     ++   S             + RS  R         D D+    V
Sbjct: 690 WTASVDFTRDVTIGVDQLSRLSD---------VVRKIRSTARFLLG-NVYRDDDVKSSEV 739

Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQE----PYKLAFYLYDLASVFHGHWSHGR 540
                +F   E  ++  L E+ + ++ A    +       +  +           +    
Sbjct: 740 GLSRGDFGLIEEYMLHLLYEFQQSVQRAYNELDFKQVVQLITNFT---TKTLSAFYFETV 796

Query: 541 ENPRLRFVQANNRKLT 556
           ++      Q +  +  
Sbjct: 797 KDILYSNAQGDPERQR 812


>gi|118589091|ref|ZP_01546498.1| valyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118438420|gb|EAV45054.1| valyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 976

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 56/204 (27%), Gaps = 35/204 (17%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N  G +H+GH     + D L       G++   +   + AG     +AL +    Q A 
Sbjct: 45  PNVNGSLHMGHALNNTLQDILIRWKRMQGFDTLWQPGTDHAG-----IALQIAVERQMAE 99

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N  S    G                        F E  W    +  S       I   L
Sbjct: 100 RNEPSRTEIG---------------------RKAFVERAWRYKGEVGSA------IIAQL 132

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           K L    D          G    +R +  +L  +G +Y+           +    D +  
Sbjct: 133 KRLGASCDWSRERFTMDEGLSEAVRKVFVDLYNEGLIYKSKRLVNWDPKMETAISDLEVE 192

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTY 333
              +         PL    G  TY
Sbjct: 193 NVETDGHMWHFRYPLA---GGATY 213



 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +   +     ++         +  DG   KMSK  G+ I    ++   G+D+ 
Sbjct: 584 FFWVARMMMQGLHF-MDEVPFHTVYFNSIVVDGKGKKMSKSTGNVIDPLDLIGRFGADAT 642

Query: 423 RFMMLWRK 430
           RF +  ++
Sbjct: 643 RFALASQE 650


>gi|115443869|ref|NP_001045714.1| Os02g0121000 [Oryza sativa Japonica Group]
 gi|41052628|dbj|BAD08137.1| putative glutamate-tRNA ligase [Oryza sativa Japonica Group]
 gi|41052741|dbj|BAD07597.1| putative glutamate-tRNA ligase [Oryza sativa Japonica Group]
 gi|113535245|dbj|BAF07628.1| Os02g0121000 [Oryza sativa Japonica Group]
 gi|215712233|dbj|BAG94360.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222622069|gb|EEE56201.1| hypothetical protein OsJ_05163 [Oryza sativa Japonica Group]
          Length = 567

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 36/281 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G +        D          +V       
Sbjct: 56  APSPTGNLHVGGARTALFNYLFAR---SKGGKFVLRIEDTDLERSTKKSEEAVLSDLAWL 112

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +     +  +Y+ +L+         + + +     ++ +++ 
Sbjct: 113 GLDWDEGPDVGGEFGPYRQSERNSMYKQYAEKLMESG-----AVYQCFCSSEELEQMKET 167

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            K + +           + G      D  I     +G  Y      PK  + +  D+ R 
Sbjct: 168 AKQMQLPP--------VYMGKWGTASDAEIQQELEKGTPYTYRFRVPKEGSLKINDLIRG 219

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
           ++ +    +GD     +++S+G   Y      D A  +        ++I     +H    
Sbjct: 220 EVSWNLDTLGDF---VIMRSNGQPVYNFCVTVDDATMR------ISHVIR--AEEHLPNT 268

Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            R   +  A+              V L       K+SKR G
Sbjct: 269 LRQALIYKALGFPMPSFAH-----VSLILAPDRSKLSKRHG 304


>gi|28493352|ref|NP_787513.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|48428542|sp|Q83GC6|SYL_TROWT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28476393|gb|AAO44482.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 806

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   L   +        +    E   N      K  ++  S  P+G +H+GH      GD
Sbjct: 17  NFRALEEKWAPIWERDRL---FEVDENDSETPRKYVLDMFSY-PSGDLHMGHAETYAYGD 72

Query: 149 TLASLMAFSGYEV 161
            +A      GY V
Sbjct: 73  FIARYWRHRGYNV 85


>gi|145219290|ref|YP_001129999.1| isoleucyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205454|gb|ABP36497.1| Isoleucyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 1088

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AVA+ + +  A  N+++   +    D    KMSK  G+ +     ++
Sbjct: 590 GVDQTRGWFYTLHAVASLLFDTAAYRNLVVNGHI---LDKNGQKMSKSKGNVVDPFETME 646

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             G+D++R ++M+         F+  +++E+ ++       +  F+V YA
Sbjct: 647 RYGADAIRWYLMVASPPWRPKSFNTDEIEEEQRKFFRAYINSYNFFVLYA 696


>gi|328956891|ref|YP_004374277.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673215|gb|AEB29261.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 816

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           IY+ G++H+     Y +        +     +          +   G   KMSK  G+ +
Sbjct: 537 IYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGNNEKMSKSKGNVV 596

Query: 409 TLRHVVDEVGSDSVR 423
               VV++ G+D++R
Sbjct: 597 NPDDVVEKFGADTLR 611


>gi|307824143|ref|ZP_07654370.1| glutamyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734927|gb|EFO05777.1| glutamyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 467

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 84/280 (30%), Gaps = 44/280 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A                           L +     + 
Sbjct: 8   APSPTGYLHVGGARTALFSWLYAR-------------------KHGGKFILRIEDTDLER 48

Query: 189 LYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                 D + EG          G      +          + +  + D          ++
Sbjct: 49  STQESVDAILEGMTWLGLEYDEGPFYQTHHFDRYK-----EIIQQLLDQGDAYYCYCSKE 103

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L+ L  +  +   E   + G     RDI+     +  V       P        D+ + 
Sbjct: 104 ELEQLRTE-QMANKEKPRYNG---KCRDIVGPKGDREAVIR--FKNPVDGAVTIPDLIKG 157

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            ++  +  +    D  + + DG+ TY    +       +    ++I   G DH     R 
Sbjct: 158 DIVVANKELD---DLIIARGDGTPTYNLTVV---VDDMDMKVTHVIR--GDDHINNTPRQ 209

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+  +  +   L    + L  DG   ++SKR G  
Sbjct: 210 MNILKALGAELPKYAHL---PMILGPDGA--RLSKRHGAV 244


>gi|166367300|ref|YP_001659573.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089673|dbj|BAG04381.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 850

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K        G++       K     +      P+G +H+GH R   + D +A L    G
Sbjct: 10  QKWQKIWQQMGLDKTPENADKPKFYALSMF-PYPSGNLHMGHVRNYTITDVIARLKRMQG 68

Query: 159 YEV 161
           Y V
Sbjct: 69  YRV 71


>gi|28572538|ref|NP_789318.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|48428543|sp|Q83HV5|SYL_TROW8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28410670|emb|CAD67056.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 806

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           N   L   +        +    E   N      K  ++  S  P+G +H+GH      GD
Sbjct: 17  NFRALEEKWAPIWERDRL---FEVDENDSETPRKYVLDMFSY-PSGDLHMGHAETYAYGD 72

Query: 149 TLASLMAFSGYEV 161
            +A      GY V
Sbjct: 73  FIARYWRHRGYNV 85


>gi|27363718|ref|NP_759246.1| glutamyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|30173150|sp|Q8DFH5|SYE_VIBVU RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|27359834|gb|AAO08773.1| glutamyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.72,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  +R +
Sbjct: 61  MQWLGLEWNEGPYFQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEVRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDAEHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFEDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  + ++DGS TY   +       ++ G  ++I   G DH     R  
Sbjct: 163 IEISNSQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHVIR--GEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|325285495|ref|YP_004261285.1| Valyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324320949|gb|ADY28414.1| Valyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 877

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 53/199 (26%), Gaps = 33/199 (16%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
             +Y  +         I     N TG +H+GH     + D L       G       ++ 
Sbjct: 22  KHKYFHSTPDDREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLQGKNAC---WV- 77

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                                  + + +         LK  G   AD           E+
Sbjct: 78  --------------------PGTDHASIATEAKVVAKLKEKGINKAD--------LTREE 109

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
           +L    D+       +I D LK L    D   +         + +  +  +L  +G +Y 
Sbjct: 110 FLKHAWDW-TDEYGGVILDQLKKLGCSCDWDRTSFTMDDHMSASVIKVFVDLYNKGKIYR 168

Query: 289 GILPPPKSKTTQKCDMDRK 307
           G          Q    D +
Sbjct: 169 GYRMVNWDPEAQTTLSDEE 187


>gi|323495447|ref|ZP_08100524.1| leucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310370|gb|EGA63557.1| leucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 857

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|253990367|ref|YP_003041723.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781817|emb|CAQ84980.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 675

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 68/207 (32%), Gaps = 23/207 (11%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A +     +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFSNMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRDAPYFGFEIPDAPGKYFYV 253

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
            +D       S     D    L   D       ADL +F  K      +++Y     HS 
Sbjct: 254 WLDAPIGYMGSFQNLCDKRGNLSFDDFWAKDSTADLYHFIGK------DIVYF----HSL 303

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +     A+      +K   NV +   V +       KMSK  G FI     +D + +D +
Sbjct: 304 F---WPAMLEGSGYRKPT-NVFVHGYVTV----NGAKMSKSRGTFIKASTYLDHLDADCL 355

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKEN 449
           R+    + +S + D D        + N
Sbjct: 356 RYYYAAKLSSRIDDIDLNLEDFVQRVN 382


>gi|161986610|ref|YP_196426.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1105

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 34/205 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP--TGPMHVGHCRCAVVGDTLA 151
             S + + +         + +++  +  K    F    P   G  H GH     + DT+A
Sbjct: 13  DFSLIEEQILEFWKENNIFKKSIENRDEKRRFVFYDGPPFANGLPHYGHLLTGFIKDTVA 72

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+ V R +  +  G     LA        +        L         ++  G 
Sbjct: 73  RYKTMAGFRVDRRFGWDCHGLPAEMLA--------EKELGVSGKLA--------IEEFGI 116

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y    +     +W   +     Q+      +D K +N+     I    +      
Sbjct: 117 EKFNNYCRNSVMKFSREWKQYIDR---QSRWVDFENDYKTMNLSFMESIMWSFYQ----- 168

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
                   L ++G +YE I   P S
Sbjct: 169 --------LWQKGLIYESIKIVPYS 185


>gi|84029517|sp|Q5FH91|SYI_EHRRG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1118

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 34/205 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP--TGPMHVGHCRCAVVGDTLA 151
             S + + +         + +++  +  K    F    P   G  H GH     + DT+A
Sbjct: 26  DFSLIEEQILEFWKENNIFKKSIENRDEKRRFVFYDGPPFANGLPHYGHLLTGFIKDTVA 85

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+ V R +  +  G     LA        +        L         ++  G 
Sbjct: 86  RYKTMAGFRVDRRFGWDCHGLPAEMLA--------EKELGVSGKLA--------IEEFGI 129

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y    +     +W   +     Q+      +D K +N+     I    +      
Sbjct: 130 EKFNNYCRNSVMKFSREWKQYIDR---QSRWVDFENDYKTMNLSFMESIMWSFYQ----- 181

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
                   L ++G +YE I   P S
Sbjct: 182 --------LWQKGLIYESIKIVPYS 198


>gi|300709425|ref|YP_003735239.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123108|gb|ADJ13447.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 1069

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 345 YERGFDNM----IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
            E  FD +    + +   D   G+      +  A   +     VL+        D    K
Sbjct: 557 KEEEFDELWPADLIMEAHDQTRGWFWSQLGMGTAALGEVPYDEVLMHGFAN---DSEGKK 613

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +     +   GSD++R  +L      E + F + ++    +           
Sbjct: 614 MSKSVGNVVQPHEAIQRHGSDAMRLFLLSVNPQGEDMRFSWDEMATMERN---------L 664

Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVH 501
               ++FR          FD    ++   +S+ +   E  L   
Sbjct: 665 NILWNVFRFPLPYMRMDGFDPEETDLDAVDSDLELVDEWILARL 708


>gi|297526696|ref|YP_003668720.1| leucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255612|gb|ADI31821.1| leucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 969

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 28/197 (14%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     S       +   +     K  I         P+H+GH R   +GD +A      
Sbjct: 13  IEAKWQSRWKERKIFEPRIEPDKPKYFITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLR 72

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           GY V     ++I   G  I  ++  +    ++ +    +      Y   Y+K        
Sbjct: 73  GYNVLFPMAFHI--TGTPIIAISERISRGEEEIINRYRN------YVAKYVKDPV----- 119

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272
           +    + +F +   L +     V         D  AL    D       FH G+P   + 
Sbjct: 120 EIEKIIESFKDPLNLAVFFAERVHM-------DFDALGYSID---WRRRFHTGEPIYNAF 169

Query: 273 IRDIIDNLARQGYVYEG 289
           +      L  +G +  G
Sbjct: 170 VTWQFHKLHEKGVIKRG 186


>gi|227830592|ref|YP_002832372.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227457040|gb|ACP35727.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
           islandicus L.S.2.15]
          Length = 934

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 27/190 (14%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY V                   +F    Q        + +    G +          ++
Sbjct: 69  GYNV-------------------LFPFAFQFTGTPVLAIADSIRRGDFD-------MIEF 102

Query: 218 SSELLNFPEEKWLPIVKDYSV-QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              +   PE+K   +   Y + +   + +++  K++ +  D   S           I   
Sbjct: 103 FKSVYGVPEDKIKELGDPYKLAEYFKEEMKNTAKSIGMSIDWRRSFTTTDTRFEKFIHWQ 162

Query: 277 IDNLARQGYV 286
           +  L   GY+
Sbjct: 163 LRKLKELGYL 172


>gi|58416839|emb|CAI27952.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1125

 Score = 40.7 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 34/205 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP--TGPMHVGHCRCAVVGDTLA 151
             S + + +         + +++  +  K    F    P   G  H GH     + DT+A
Sbjct: 33  DFSLIEEQILEFWKENNIFKKSIENRDEKRRFVFYDGPPFANGLPHYGHLLTGFIKDTVA 92

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+ V R +  +  G     LA        +        L         ++  G 
Sbjct: 93  RYKTMAGFRVDRRFGWDCHGLPAEMLA--------EKELGVSGKLA--------IEEFGI 136

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y    +     +W   +     Q+      +D K +N+     I    +      
Sbjct: 137 EKFNNYCRNSVMKFSREWKQYIDR---QSRWVDFENDYKTMNLSFMESIMWSFYQ----- 188

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
                   L ++G +YE I   P S
Sbjct: 189 --------LWQKGLIYESIKIVPYS 205


>gi|329113640|ref|ZP_08242418.1| Leucyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697047|gb|EGE48710.1| Leucyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 872

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
               K     +E     P+G +H+GH R   +GD +A      G+ V
Sbjct: 36  PPANKPKYYVLEMF-PYPSGQLHMGHVRNYALGDVIARYKRARGFSV 81


>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 493

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 47/219 (21%)

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE----NPVFY 453
            KMSK  G+F  +R ++D+   D VR+ +L       LDFD  K++   +          
Sbjct: 270 EKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSPLDFDDEKLQVAGRGLERIKTAVR 329

Query: 454 VQYAYARCRSIFRQAK---------------DIFPDLDFDLFPRNVIPQESEFDTSELQL 498
           + Y          +                 +    +D D      I    E    E+ +
Sbjct: 330 LLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAMDDDFNTALAISVFFELS-KEINI 388

Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW------SHGRENPRLRFVQANN 552
           +  +     V+  A        LA   + L   F+  +              L    A +
Sbjct: 389 L--VGNLGGVVTPAARQL----LAD-AHALVKDFN--YVLGILKEDQTSGRLLLEAPAKD 439

Query: 553 RKLTMMRLQLV------------HAVASIINSGLNIIGV 579
            KL    +QL+             A A  I  GL  +G+
Sbjct: 440 DKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGI 478


>gi|323144943|ref|ZP_08079504.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415282|gb|EFY06055.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 674

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 37/222 (16%)

Query: 230 LPIVKDYSVQAMMKII--RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287
           LP  KD+    +   +  ++    L       + + D  R  P    +I D   +  YV+
Sbjct: 188 LPKFKDFLHDYINSGVLPKEMANKLEEWFAQGLKDWDISRDAPYFGFEIPDAENKYFYVW 247

Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347
              L  P        +   K  +        D D+ L      Y +   D+ YF      
Sbjct: 248 ---LDAPIGYMASFKNFCDKNGIDFDAFWNKDSDKEL------YHFIGKDILYF------ 292

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                       HS +        A +     ++   +     +  +G   KMSK  G F
Sbjct: 293 ------------HSLF------WPATLKGSDHRLPTGIFVHGYVTVNGA--KMSKSKGTF 332

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           I     +  +  + +R+    + N++ +D D       +K N
Sbjct: 333 IKASTYLKHLKPECLRYYFASKMNNQAVDLDLALDDFVAKVN 374


>gi|288905923|ref|YP_003431145.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978889|ref|YP_004288605.1| methionyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732649|emb|CBI14221.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178817|emb|CBZ48861.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 667

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 107/350 (30%), Gaps = 78/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       +EV     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  E+L    +K++    DY  + +  +    L  
Sbjct: 66  -------GITPQAYVDGMAADVKKLW--EMLEISYDKFIRTTDDYHEKVVADVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLA------YFKCKYERG 348
              R     D            ++ DG               DLA       +  K    
Sbjct: 171 YFLRLGKYADRLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSN 230

Query: 349 FDNMIYVM-----------GSDHSGY-----VKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             +++YV            G     +           V   V +   + + +   ++ + 
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMM 290

Query: 393 RDGM--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 LDMKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 340


>gi|258543599|ref|YP_003189032.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634677|dbj|BAI00653.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637733|dbj|BAI03702.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640787|dbj|BAI06749.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643842|dbj|BAI09797.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646897|dbj|BAI12845.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649950|dbj|BAI15891.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652940|dbj|BAI18874.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655994|dbj|BAI21921.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 872

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
               K     +E     P+G +H+GH R   +GD +A      G+ V
Sbjct: 36  PPANKPKYYVLEMF-PYPSGQLHMGHVRNYALGDVIARYKRARGFSV 81


>gi|296127554|ref|YP_003634806.1| glutamyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296019370|gb|ADG72607.1| glutamyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 481

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 107/350 (30%), Gaps = 74/350 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R          ++    S+ 
Sbjct: 9   APSPTGFLHIGNARTALFNWLYAKAIKGKLILRIEDTDQERS-----TKEAVDMAIKSLK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         +     G   G Y +    ++  KY+ +L+   +  +        ++   
Sbjct: 64  WLGIDWDEGPEV----GGDYGPYFQSERLDIYKKYTEKLMEEGK-AYYCFCTSEELEKKS 118

Query: 243 KIIRDDLKAL---NIQHDIFISE--DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + R   + +       DI + E       G+P+ IR                   PK +
Sbjct: 119 NMQRTLNQPIIYDGKCKDIPLEEAKRRVANGEPAKIR----------------FRVPKGQ 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D  R  +   S  +G   D  +++ +G  TY   + A           ++I   G
Sbjct: 163 IVTFDDYVRGIVKTNSDEIG---DIIIVRENGFPTY---NYAVVIDDMLMKISHIIR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG------------ 405
            DH     +   +  A+  +  +       L    +     K+SKR G            
Sbjct: 215 EDHISNTPKQILIYQALGAEVPRFAHTSSILGNDRK-----KLSKRHGAATLMEYKDEGY 269

Query: 406 ------------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                        +     +   V  D ++   L R +     FD  K++
Sbjct: 270 LPQAMRNFLALLGWTHPDALETMVDDDMIKAFKLDRFSKSPAIFDTAKLR 319


>gi|220921032|ref|YP_002496333.1| leucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219945638|gb|ACL56030.1| leucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 868

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
              +      +   RN   + T   +E     P+G +H+GH R   +GD +A      G+
Sbjct: 18  HWQAVWAERDLFRTRNDDPRPTYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARYKRAKGF 76

Query: 160 EV 161
            V
Sbjct: 77  NV 78



 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 24/139 (17%)

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G   KMSK   + +    ++   G+D+ R+ ML     E          E   +    +V
Sbjct: 629 GAIEKMSKSKRNVVDPDDIIASYGADTARWFMLSDSPPERDVI----WTEDGVQGASRFV 684

Query: 455 QYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           Q  +     I  +A+       D  L         +  +  E         + R +    
Sbjct: 685 QRVWRLVNEIAARAETSGDATADLALRKAAHKALAAVGEDIER------LRFNRCVA--- 735

Query: 514 IAQEPYKLAFYLYDLASVF 532
                     ++Y+LA+  
Sbjct: 736 ----------HIYELANTL 744


>gi|241662718|ref|YP_002981078.1| glutamyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864745|gb|ACS62406.1| glutamyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 465

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 88/283 (31%), Gaps = 49/283 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A  M   G  + R   I D    +   +        +A
Sbjct: 10  APSPTGFIHLGNIRSALYPWAFARKMK--GDFILR---IED--TDVERSSQEAVDVILEA 62

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   D D+ EG +  +      + +  +   + L +P                  +  ++
Sbjct: 63  MDWLDMDIDEGPFYQMQRMDRYRAVVAQMVQQELAYP----------------CYMSTEE 106

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY------VYEGILPPPKSKTTQKC 302
           L AL         E    RG+          +  +        V   I        +   
Sbjct: 107 LDALR--------EAQRERGEKPRYDGTWRPMPGKVLPTPPAGVQPVIRFKNPIGGSVVW 158

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D   K  +  S    D  D  + + DG+ TY   +        +    ++I   G DH  
Sbjct: 159 DDAVKGRIEISNDELD--DLVIARPDGTPTY---NFCVVVDDMDMQITHVIR--GDDHVN 211

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
              R   +  A+          +   +    +    KMSKR G
Sbjct: 212 NTPRQINILRALGGTPP-----VYAHLPTVLNEQGEKMSKRHG 249


>gi|22299641|ref|NP_682888.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|29337024|sp|Q8DH61|SYL_THEEB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22295825|dbj|BAC09650.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 857

 Score = 40.7 bits (94), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 92  YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              P  +  K         ++       K     +      P+G +H+GH R   + D +
Sbjct: 4   RYDPQVIEAKWQQEWAARQLDRTDTDPQKPKFYALSMF-PYPSGNLHMGHVRNYTITDVI 62

Query: 151 ASLMAFSGYEV 161
           A      GY V
Sbjct: 63  ARCRRMQGYRV 73


>gi|325294834|ref|YP_004281348.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 95/286 (33%), Gaps = 47/286 (16%)

Query: 261 SEDDFHRGDPSPIRDIIDNL--------ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
            E  + +     + +I +            +  + EG   P       K +MD   + F 
Sbjct: 479 GETIYSKEIADYVANIFEKESADAWYKREAKELLPEGFKCPKCGGEKFKKEMDILDVWFD 538

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVA 371
           S               GS        A  + + E  +   +Y+ GSD   G+ +     +
Sbjct: 539 S---------------GSSH-----AAVLERRPELSWPADMYLEGSDQHRGWFQASLLES 578

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
               ++    +VL         D    KMSK  G+ +    VV + G+D +R  +     
Sbjct: 579 CGTRKEAPYKSVLTHGF---TLDEKGHKMSKSLGNVVAPEDVVKKFGADILRLWVASENF 635

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
           +E +      +K+ ++          Y + R+ FR         DF      V  +  E 
Sbjct: 636 TEDVKISENILKQVAE---------VYKKIRNTFRFMLGNLS--DFTPEESLVYDELEEI 684

Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHW 536
           D   +     LA+    I +A  + +  K+   +YD  A+     +
Sbjct: 685 DKWAINRFSILAK---EIIDAYNSYKFNKIYRLIYDYCATELSSIY 727


>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 86/287 (29%), Gaps = 65/287 (22%)

Query: 271 SPIRDIIDNLARQGYVYEG----------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
             I D+I  L  +GY YE                K       +++    +  S    D +
Sbjct: 120 QEIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPSEKKRDPL 179

Query: 321 DRPLLKSD-------------GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           D  L KS              G   +    +A       +     I + G          
Sbjct: 180 DFALWKSAKAGEPAWESPWGLGRPGWHTECVAMVF----KHLGKTIDIHGGGLDLVFPHH 235

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A       +          L   G   KMSK  G+++TLR V      D +R ++L
Sbjct: 236 ENEIAQAEALTGKPFARYWMHNGLVTVG-GQKMSKSLGNYVTLREVYRRYHPDVLRLLVL 294

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           +      LDF + K++E  +         AY R R             D D+     + +
Sbjct: 295 FTHYRSPLDFSWEKMEEAKR---------AYERIRHAIE---------DLDMLKNLQVVE 336

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534
           E+            +++    ++ A  A           DL+  F+ 
Sbjct: 337 EN-----------KISQLYEKVKEAEEAFF--------EDLSEDFNT 364


>gi|251810623|ref|ZP_04825096.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876376|ref|ZP_06285243.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805783|gb|EES58440.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295401|gb|EFA87928.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 916

 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 69/228 (30%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S               GS        
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDS---------------GSSH-----C 536

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
              + + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 537 GVLETRPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|242242475|ref|ZP_04796920.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234049|gb|EES36361.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 916

 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                ++E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RHELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|163791562|ref|ZP_02185965.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873167|gb|EDP67268.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 805

 Score = 40.7 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           IY+ G++H+     Y +        +     +          +   G   KMSK  G+ +
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGNNEKMSKSKGNVV 585

Query: 409 TLRHVVDEVGSDSVR 423
               VV++ G+D++R
Sbjct: 586 NPDDVVEKFGADTLR 600


>gi|325661048|ref|ZP_08149675.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325472555|gb|EGC75766.1| glutamyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 485

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 107/291 (36%), Gaps = 32/291 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A      G +        D    ++  AL + +R  + 
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIA---KHEGGDFMLRIEDTDQERFVDG-ALEIIYRTLEK 64

Query: 189 LYNNDSDLPE-GYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
                 + P+     G Y++       +  KY+ +L++  +  +        ++++   +
Sbjct: 65  TGLIHDEGPDKDGGVGPYVQSERQAMGIYMKYAKQLIDQGD-AYYCFCDKERLESLKSKV 123

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            +    +       +             ++ I+     G  Y   +  P   TT   D  
Sbjct: 124 SESGTEIVAYDKHCLHLS----------KEEIEANLAAGKPYVIRINMPTEGTTTFHDDI 173

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
             ++   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++     
Sbjct: 174 YGEITVPNEELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--VRGNEYLSSAP 225

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +   +  A   +      + C L+    +    K+SKR+G   +   ++++
Sbjct: 226 KYNRLYEAFGWEIP--TYVHCPLIT---NEEHKKLSKRSGHS-SYEDLLEQ 270


>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782408|sp|B8CWL4|SYI_HALOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 929

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 42/236 (17%)

Query: 353 IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G+D   G+       A A   K     V+    V    D    KMSK  G+ ++ +
Sbjct: 557 LYLEGTDQYRGWFNSSLLTAVATEGKPPYEAVVTNGFVV---DDKGNKMSKSIGNVVSPQ 613

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R  +      + +     ++ +Q+ E         Y R R+ FR     
Sbjct: 614 DVIKRYGADILRLWVASSNFKDDVRVS-DRILKQNSE--------VYRRIRNTFRFILGN 664

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQ--LIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
             D +      +        D +E+   +++ L +  + +  A    E +++  Y     
Sbjct: 665 INDFNPGQHYVDY------NDRAEIDRWIMIKLQDLIKDVTRAYDEYEYHRV--Y----- 711

Query: 530 SVFHGHWSHGRENPRLRFVQA---NNRKLTMMR-----------LQLVHAVASIIN 571
              H   +    +  +  V+     +   ++ R           L LV  VA ++ 
Sbjct: 712 HDVHNFCTIEMSSLYVDIVKDRLYTDGTNSLSRRSAQSTLYDILLVLVKLVAPVLA 767


>gi|167933048|ref|ZP_02520135.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7b]
          Length = 336

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 15/149 (10%)

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYERGFDNMIYVMGSDH- 360
           RK L +  ++ GDD     +  D    Y       D   ++  +       + V+G D  
Sbjct: 50  RKNLAWGVSVPGDDNQVIYVWIDALSNYITVLGYPDDESWRDYWPAN----VQVVGKDIL 105

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             +     A+  A+     +  ++      +  DG   KMSK  G+ ++   V+D  G+D
Sbjct: 106 RFHAIIWPAILMALGLPLPKQILVHG---HIGFDGK--KMSKSLGNVVSPNEVIDTYGAD 160

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + R+    R+   L D DF   K +   N
Sbjct: 161 AFRYYF-RRQIPTLDDGDFTWEKFEKAYN 188


>gi|148260778|ref|YP_001234905.1| valyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146402459|gb|ABQ30986.1| valyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 891

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 54/200 (27%), Gaps = 35/200 (17%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N    P+     L  +      +  +     T   I     N TG +HVGH     + D 
Sbjct: 5   NF--DPAAFESRLYGLWEQAGAFAADPSRAATPFTIMIPPPNVTGSLHVGHALTMTLQDV 62

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L      +G +   +   + AG     +      R                  G   + +
Sbjct: 63  LIRHHRMNGRDALWQPGTDHAGIATQLMVERELQRE-----------------GTSRQEI 105

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           G+   D +   +  +  E+   I +              L+ L    D          G 
Sbjct: 106 GR---DAFLDRVWTWKAEQGGNITRQ-------------LRRLGASPDWSRERFTMDEGL 149

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              +R I   L   G +Y  
Sbjct: 150 SKAVRTIFVRLFNDGLIYRA 169



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +     +         V  +   IN        L RD    KMSK  G+
Sbjct: 498 TGFD-IIFFWVAR---MIMMGMYAMGDVPFRTVMIN-------GLVRDERGQKMSKTKGN 546

Query: 407 FITLRHVVDEVGSDSVRFMMLWRK 430
            I    ++D+ G+D++R+ ++ + 
Sbjct: 547 VIDPLALIDQFGADALRYTVIAQS 570


>gi|90408705|ref|ZP_01216854.1| valyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310187|gb|EAS38323.1| valyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 955

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 56/216 (25%), Gaps = 32/216 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + +           +  +         I     N TG +H+GH     + DT+ 
Sbjct: 4   TYNPSAIEQKNYQRWEEKGYFKPHGDTSKESFCIMIPPPNVTGSLHMGHAFQDTIMDTII 63

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G     +   + AG     +                               V +
Sbjct: 64  RYQRMQGKNTLWQPGTDHAGIATQMV-------------------------------VER 92

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           +L  +          E ++  + ++  ++   I +  ++ L    D          G   
Sbjct: 93  KLFAETGQTRKELGRETFIDKIWEWKEESGGTICKQ-MRRLGTSVDWDRERFTMDDGLSE 151

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            ++ +  +L     +Y G               D +
Sbjct: 152 AVKKVFVDLYNDDLLYRGKRLVNWDPKLHTAISDLE 187


>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|187629791|sp|A7GK01|SYC_BACCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 465

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 65/437 (14%), Positives = 137/437 (31%), Gaps = 61/437 (13%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            + + +    E    L  K  K+ +          +H+G+ R  +V DT+   +   GY+
Sbjct: 4   HIYNTLTRQKEEFIPLEEKKVKMYV--CGPTVYNYIHIGNARPPMVFDTVRRYLEHKGYD 61

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           V    Y+++     + L      +    L  +   + E +    Y + V   L  K+++ 
Sbjct: 62  VQ---YVSNFTDVDDKLI-----KAANELGEDVPTIAERFI-EAYFEDV-TALGCKHATV 111

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
                E        D  ++ + +++     A   + D++    +F  G        I++L
Sbjct: 112 HPRVTENM------DIIIEFIQELVNKGY-AYESEGDVYYRTKEF-EGYGKLSHQAIEDL 163

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
                   G       K     D     L   +       + P  K    +    + +A 
Sbjct: 164 R------HGARIEVGEKKQDPLDF---ALWKAAKEGEIFWESPWGKGRPGWHIECSAMA- 213

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
              KY     + I +            E   A       +       +   Y +    KM
Sbjct: 214 --RKY---LGDSIDIHAGGQDLSFPHHENEIAQSEALTGKPFARYW-MHNGYININNEKM 267

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK  G+FI +  ++ +     +RF ML       ++F    ++  +              
Sbjct: 268 SKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNG------------ 315

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA--QEP 518
                 + K  + +L   +     +   +E   +E++      E+    E A        
Sbjct: 316 ----LERIKTTYRNLKHRIESSTDLTDHNEKWLAEMK------EFQSAFEAAMDDDFNTA 365

Query: 519 YKLAFYLYDLASVFHGH 535
             +   LY+LA+  + +
Sbjct: 366 NAITE-LYNLANHANQY 381


>gi|90424069|ref|YP_532439.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106083|gb|ABD88120.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 952

 Score = 40.7 bits (94), Expect = 0.76,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +      V +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFMDDVPFPTVYIHALV---RDEKGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   H++D+ G+D++RF +
Sbjct: 579 VIDPLHLIDDYGADALRFTL 598


>gi|218263088|ref|ZP_03477326.1| hypothetical protein PRABACTJOHN_03007 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222962|gb|EEC95612.1| hypothetical protein PRABACTJOHN_03007 [Parabacteroides johnsonii
           DSM 18315]
          Length = 600

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 84/230 (36%), Gaps = 27/230 (11%)

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           SV+ +   I   +KA  +       E  F  G+ +   +  + +       + ++   +S
Sbjct: 3   SVEELYNEIEKSVKA-GLMESNPYKELKFQPGEYTK--ENYEKIDLHRPYVDDVILVSES 59

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
               K + D   + F S  +                Y   +   F  +     D +    
Sbjct: 60  GKPMKRETDLIDVWFDSGAMPY----------AQIHYPFENKEIFDDRKVYPADFIAE-- 107

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 108 GVDQTRGWFFTLHALATMVFDSVSYKAVVSNGLV---LDKNGNKMSKRLGNAVDPFATIE 164

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + + FD   ++E  ++          F+  YA
Sbjct: 165 QYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYA 214


>gi|167515854|ref|XP_001742268.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778892|gb|EDQ92506.1| predicted protein [Monosiga brevicollis MX1]
          Length = 636

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 55/196 (28%), Gaps = 33/196 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           S+ ++          ++ +     +     +     N TG +H+GH     + DT+    
Sbjct: 126 SWWQQSGFLKPEYNEDFSKLRCNSEDKNFTLVIPPPNVTGTLHLGHALTNAIEDTVVR-- 183

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
                             Q+              L+N   D        V  K + +E  
Sbjct: 184 ---------------WNRQLGKTT----------LWNPGCDHAGIATQSVVEKRIWRE-- 216

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                   +   EK+L  V ++  +A    I + LK L    D               + 
Sbjct: 217 --EKKTRHDLGREKFLERVWEWK-EAKGNRIYEQLKGLGASCDWDREAFTMSDRCCRAVT 273

Query: 275 DIIDNLARQGYVYEGI 290
           +    +   G ++  +
Sbjct: 274 EAFVRMHEDGLIFRSV 289


>gi|37679133|ref|NP_933742.1| glutamyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932020|sp|Q7MMW8|SYE_VIBVY RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|37197875|dbj|BAC93713.1| glutamyl- and glutaminyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  +R +
Sbjct: 61  MQWLGLEWNEGPYFQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEVRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDAEHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFEDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  + ++DGS TY   +       ++ G  ++I   G DH     R  
Sbjct: 163 IEISNSQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHVIR--GEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|317472658|ref|ZP_07931973.1| glutamyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899835|gb|EFV21834.1| glutamyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 486

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 104/301 (34%), Gaps = 54/301 (17%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD L  +      +  +E  +  A   I     
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEGGDFLLRI-----EDTDQERLVEGAVDIIYNTLA 63

Query: 180 SVFWRYQQALYNNDSDLP----EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                + +    +    P    E    G+Y+    K+L DK       F +E+ L  +K 
Sbjct: 64  KAGLVHDEGPDKDGGCGPYVQSERQSAGIYM-DYAKKLIDK-GEAYYCFCDEERLSSLKV 121

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            S   ++                  SE+             ++   + G  Y      P 
Sbjct: 122 KSGDVVVSHYDK-------HCLNLSSEE-------------VEEKLKAGIPYVIRQNNPT 161

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
             TT   D    ++   +  +    D  L+KSDG  TY   + A     +  G  ++  V
Sbjct: 162 EGTTTFADEIYGEITVENMELD---DMILIKSDGYPTY---NFANVVDDHLMGITHV--V 213

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            G+++     +   +  A   +K     + C L+    D    K+SKR+G   +   +++
Sbjct: 214 RGNEYLSSTPKYNRLYDAFGWEKP--VYVHCPLIT---DEEHKKLSKRSGHS-SFEDLLE 267

Query: 416 E 416
            
Sbjct: 268 A 268


>gi|307243608|ref|ZP_07525751.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492977|gb|EFM64987.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 883

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 50/196 (25%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P      +         +   +       +I     N TG +H+GH     + D L   
Sbjct: 10  NPKDFEDRIYKEWQDKGLFKSKIDKTKKSFSIVMPPPNITGQLHMGHALDDTLQDILTRW 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GYE          G    ++A  V    +       S    G              
Sbjct: 70  KRMDGYEALWIP-----GTDHASIATEVKVVDKIKKETGKSKYEIG---REEFLEHAWAW 121

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +++  +++N                         +K L    D  +       G    +
Sbjct: 122 KEEFGGKIVNQ------------------------VKKLGASCDWDLERFTMDEGCNKAV 157

Query: 274 RDIIDNLARQGYVYEG 289
                 L  +G++Y G
Sbjct: 158 TKFFVKLYEEGHIYRG 173



 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 31/220 (14%)

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           V+   +    ++EK      +L     L RD    KMSK  G+ I    ++D+ G+D++R
Sbjct: 495 VRMAFSAMFCMNEKP--FEHVLIHG--LVRDSEGRKMSKSLGNGIDPLEIIDQYGADALR 550

Query: 424 FMMLWRKNS-ELLDFDFCKVKEQSKEN----PVFYVQYAYARCRSIFRQAKDIFPDLDFD 478
           F +    +    + F   +V+     N          +      S+         + +  
Sbjct: 551 FTLTTGNSPGNDMRFYMERVEFARNFNNKLWNASRFVFMNLEDESLLDNLTRESVEANLT 610

Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH-GHWS 537
           L  + +I + +     E+    ++ ++   +  A                A  F    + 
Sbjct: 611 LADKWIISRANRL-VKEVN--YNMDQFD--LGIALQK-------------AYDFTWSEYC 652

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577
                     +  ++R+       L      ++   L ++
Sbjct: 653 DWYIEIVKPRLYGDDREAKRA--ALYTLT-YVLEKILKLL 689


>gi|303238508|ref|ZP_07325042.1| glutamyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593906|gb|EFL63620.1| glutamyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 546

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 43/339 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ------INTLALSVF 182
           + +PTG +H+G+   A V + LA     +G  + R   I D   +      +  +  S+ 
Sbjct: 41  APSPTGFIHLGNLYGAFVDERLAH--QSNGVFMLR---IEDTDEKRKVEGAVELIISSLE 95

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           +   +       D   G Y G Y +    E+    +  L+      +     +  ++ + 
Sbjct: 96  YFGLKFDEGASVDREIGNY-GPYYQSNRGEIYQTVAKYLIETG-RAYPCFCSEEELEEIR 153

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           K      +A  +    +     +       I+  +DN       ++ +  P K+      
Sbjct: 154 KQQ----EAEKVNTGYYGKWAKYRDTSLEEIQKHLDNNESFVLRFKSMGDPEKNFEIDD- 208

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                 +  R ++  ++ D  +LK++G  TY     A+    +     ++  V G +   
Sbjct: 209 -----AIRGRLSIPENNQDVVILKANGIPTYHF---AHVVDDHLMKVTHV--VRGEEWLS 258

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG-------------DFIT 409
            +     +   +  +           +    +G+  K+SKR                  T
Sbjct: 259 TLPIHYELFKTLGWELP--VYCHTAHLMKIDEGVKRKLSKRKDPELGLEFYMKLGYHPAT 316

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           +R  +  + + +     L   ++ + DF F   K  +  
Sbjct: 317 VREYLLTILNSNFEEWRLANPDNSIYDFKFTLDKMSNSG 355


>gi|126697211|ref|YP_001092097.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126544254|gb|ABO18496.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 918

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 62/234 (26%), Gaps = 33/234 (14%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       S   +  N    G    +     N TG +H+GH     + D +       G
Sbjct: 19  EKKWQEKWESLEAFSPNPEDDGESFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLG 78

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V         G    ++A+      Q       S+             +G+   D++ 
Sbjct: 79  KNVLCLP-----GTDHASIAVQTILEKQLKSEGKTSE------------DIGR---DEFL 118

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               N+ E+    IV               LK +    D         +     + +  +
Sbjct: 119 KRAWNWKEQSGGRIVSQ-------------LKRIGYSVDWTRERFTLDQKLNEAVIEAFN 165

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
            L ++  +Y G         +Q    D +  +            PL+   G   
Sbjct: 166 ILYKKNLIYRGEYLVNWCPESQSAVSDLEVEMQEVNGHLWHFKYPLISESGEQL 219



 Score = 38.0 bits (87), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    +      +V +  LV   RD    KMSK +G+
Sbjct: 507 TGFD-IIFFW-------VARMTMMGNTFTNNIPFKDVYIHGLV---RDENNKKMSKSSGN 555

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            I    ++D+ GSD++RF ++        D      +++   + V
Sbjct: 556 GIDPILLIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTV 600


>gi|125532574|gb|EAY79139.1| hypothetical protein OsI_34246 [Oryza sativa Indica Group]
          Length = 1048

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 32/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + K   S   S   +  +         I     N TG +H+GH     + D +   
Sbjct: 95  NPAAVEKSWYSWWESSQYFVADATSSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRW 154

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SGY       ++ AG     +      R +    ++                     
Sbjct: 155 RRMSGYSALWVPGMDHAGIATQVVVEKRLMRDRNLSRHDLGR------------------ 196

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DK+  E+L + ++    I+K              L+ L    D               +
Sbjct: 197 -DKFLLEVLQWKDQHGGTILKQ-------------LRTLGASLDWSRECFTMDEKRSKAV 242

Query: 274 RDIIDNLARQGYVYEG 289
            +    L ++G +Y  
Sbjct: 243 TEAFIRLHKEGLIYRD 258


>gi|134046058|ref|YP_001097544.1| valyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132663683|gb|ABO35329.1| valyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K +     +   +      K     I+     PTG MH+GH       D +A     +
Sbjct: 11  LEKKVQEKWENEKTFKFLEDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+                    V +      +   +++       +    + +    ++
Sbjct: 71  GYD--------------------VLFPQGWDCHGLPTEVKVEELNNITKSDIDRH---EF 107

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
               +   +E              ++ +R  +++L I  D    + ++   +P  +R   
Sbjct: 108 RRLCVELTDEN-------------VEKMRGQVRSLGISID---WDREYITMNPDYVRKSQ 151

Query: 276 -IIDNLARQGYVYEGILP 292
                +  +G +Y G  P
Sbjct: 152 TAFLKMYEKGLIYRGKHP 169


>gi|85859341|ref|YP_461543.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722432|gb|ABC77375.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 933

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 27/207 (13%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+       +     +    NVL    V    DG   KMSK  G+ I  + 
Sbjct: 561 YLEGSDQHRGWFHSSLLESVGTRNRAPYRNVLTHGFVV---DGEGKKMSKSVGNVIESQQ 617

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           ++D  G++ +R  +     +  L      +K   +         AY R R+  R    + 
Sbjct: 618 IIDAYGAEILRLWVASEDYTVDLRISDEILKRLVE---------AYRRIRNTSR--FILG 666

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
              DF++   +V    ++ +  +  ++  L E  R +  +    + +          +VF
Sbjct: 667 NLYDFNVESDSVA--YADLEPMDRWMLHRLQELIRKVRTSYDNFQFH----------AVF 714

Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMR 559
              ++    +    ++     +L   R
Sbjct: 715 SALYNFCTVDLSALYLDVLKDRLYTSR 741


>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|187629810|sp|A4J0Y9|SYC_DESRM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 486

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 55/318 (17%), Positives = 101/318 (31%), Gaps = 44/318 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  V  DT+     + GY+V       D       +   +  R  +    +  +
Sbjct: 35  IHLGNARPLVFFDTVRRYFLYKGYKV-------DYVQNFTDVDDKIINRAAEE-KIDPLE 86

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           L + Y    ++      +    +   ++   E+ + ++K    Q           A  + 
Sbjct: 87  LAQKYIQEFFVDADALNVMRADTHPKVSEHIEEIIDLIKRLEDQG---------HAYVVD 137

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
            D++ +   F        R + D       +  G       +     D     L   +  
Sbjct: 138 GDVYFAVRSFAEYGKLSGRSLED-------MQAGARVEVDPRKKDPMDF---ALWKAAKP 187

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAV 370
                D P     G   +     A  +     GFD  I+  G D     H   + + EA 
Sbjct: 188 GEPSWDSPW--GSGRPGWHIECSAMAEKYLGNGFD--IHGGGFDLIFPHHENEIAQSEAA 243

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
             A   +          +   +      KMSK  G+F  +R ++ +   D VR+ +L   
Sbjct: 244 CKAPFAR--------YWMHNGFITINQEKMSKSLGNFFLVREILAKFPPDVVRWYLLSTH 295

Query: 431 NSELLDFDFCKVKEQSKE 448
               LDFD  K+    K 
Sbjct: 296 YRSPLDFDDEKLVMSGKG 313


>gi|113477437|ref|YP_723498.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123160290|sp|Q10XJ9|SYC_TRIEI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110168485|gb|ABG53025.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 489

 Score = 40.7 bits (94), Expect = 0.77,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 123/387 (31%), Gaps = 58/387 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  DT+   + + GY+V                      RY Q   + D  +
Sbjct: 38  HLGHARSYIAWDTMRRYLIWQGYQV----------------------RYVQNFTDIDDKI 75

Query: 197 PEGYYP-GVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
            +     G  +  V K   + Y  ++      E         ++  +  +I  DL+    
Sbjct: 76  LKRARETGSSMDSVAKRFTEAYFEDMKRLNVLEADEYPRATQNIDRIQNLIH-DLEKKGF 134

Query: 255 QH----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
            +    D++    +F +      R     L        G +     +T +K D     L 
Sbjct: 135 AYSSGGDVYYQVREFSQYGKLSGR----RLEEMQAGASGRVDSEDLETAKKKDPFDFALW 190

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVK 365
             +       D P  K  G   +     A  +       D  I+  G+D     H   + 
Sbjct: 191 KAAKTGEPAWDSPWGK--GRPGWHIECSAMVQDCLGETID--IHAGGADLIFPHHENEIA 246

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRF 424
           + EA     S  K      L             KMSK  G+F T+R ++D+ V   ++R 
Sbjct: 247 QSEA-----STGKILARYWLHNGFVTING---EKMSKSLGNFTTIRDLLDQPVDPMALRM 298

Query: 425 MMLWRKNSELLDFDFCKVKEQS------KENPVFYVQYAYARCRSI-FRQAKDIFPDLDF 477
            +L  +  + +DF    +          KE  +F  QY       +  +   D    L  
Sbjct: 299 FVLTAQYRKPIDFTEEAIASAKNGWNTIKEGILFPYQYGPKLGWEMPAKNLSDQTLLLTS 358

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAE 504
            L        +     + L ++  LA+
Sbjct: 359 YLEKFQKAMDDDINTPAALAILFELAK 385


>gi|330469644|ref|YP_004407387.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812615|gb|AEB46787.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 872

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 49/191 (25%), Gaps = 34/191 (17%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           ++     V  G         K     +     N TG +H+GH     V D L       G
Sbjct: 26  QRRYEQWVADGRFRASADSDKPPFTIV-IPPPNVTGSLHMGHALDHTVQDALVRRKRMQG 84

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           +                           +AL+    D        V  + +  +   ++ 
Sbjct: 85  F---------------------------EALWLPGMDHAGIATQNVVERQLAAQGLSRHD 117

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
                F E  W    K  S  A++  +R     L    D          G    +  +  
Sbjct: 118 LGREKFVERVWQ--WKAESGGAILGQMR----RLGDSVDWDRERFTMDEGLSRAVLTMFK 171

Query: 279 NLARQGYVYEG 289
            L   G +Y  
Sbjct: 172 KLYDDGLIYRA 182


>gi|323499960|ref|ZP_08104918.1| leucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323314977|gb|EGA68030.1| leucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 857

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|320157122|ref|YP_004189501.1| glutamyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932434|gb|ADV87298.1| glutamyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  +R +
Sbjct: 61  MQWLGLEWNEGPYFQTQRFDRYNEMVDKL------LAEDKAYKC---YASKELLDEVRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDAEHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFEDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  + ++DGS TY   +       ++ G  ++I   G DH     R  
Sbjct: 163 IEISNSQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHVIR--GEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|262374949|ref|ZP_06068183.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309962|gb|EEY91091.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 873

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            S +   +     S   +      +G +  I  +   P+G +H+GH R   +GD ++   
Sbjct: 11  ASAIEPQVQQDWESRKAFKVADKVEGPRRYILSMFPYPSGKLHMGHVRNYTIGDVISRFH 70

Query: 155 AFSG 158
              G
Sbjct: 71  RLKG 74


>gi|260900739|ref|ZP_05909134.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108996|gb|EFO46536.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 728

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254765181|sp|C0ZIF7|SYC_BREBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 468

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 120/388 (30%), Gaps = 73/388 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-------GAQINTLALS 180
                   +H+G+ R A+V DTL   + + GYEVT    I D          Q       
Sbjct: 29  CGPTVYNYIHIGNARPAIVFDTLRRYLKYRGYEVTFVQNITDVDDKLIRVANQEGVTVKE 88

Query: 181 VFWRYQQALYNNDSDL---PEGYYPGVY-----LKHVGKELADKYSSELLNFPEEKWLPI 232
           V  RY  A   +   L   P    P V      +    + L +K  +      E +    
Sbjct: 89  VADRYTDAYNADLKSLNVSPPDIQPRVMQTIPEIIEFVQGLIEKGFAY-----ESEGDVY 143

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            +    Q   K+    L  L     + I+E   H  D          L +     E    
Sbjct: 144 FRTGRFQEYGKLSHQPLDDLQAGARVEINEKKEHPLDF--------VLWKAAKTGEVTWD 195

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGF 349
            P  +      ++   +  +   +G+++D     +D  + +   ++A    F  K     
Sbjct: 196 SPWGEGRPGWHIECSAMALK--FLGEEIDIHAGGTDLVFPHHENEIAQSECFTGKV---- 249

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
                           R       ++                       KMSK  G+F+ 
Sbjct: 250 --------------FARYWLHNGMLNIDN-------------------EKMSKSLGNFLL 276

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
            R + ++ G   +RF ML       ++F    +++ +  N +  +  AY         A+
Sbjct: 277 ARDLSEKFGGQLIRFFMLQGHYRNPINFSEELIEQAA--NGLDRITTAYTNLSHRLDTAR 334

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQ 497
              P+ D       +I +  E   +E+ 
Sbjct: 335 AEEPN-DQAQEQARIIGELRERFIAEMD 361


>gi|170290113|ref|YP_001736929.1| HerA helicase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174193|gb|ACB07246.1| HerA helicase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 470

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 20/198 (10%)

Query: 157 SGYEVTREYYIN-DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           +GY      +   D       +++      + ++ +  S + EG+Y    ++   +E   
Sbjct: 181 NGYRAIVLDWSGEDYAPHFGGISMREIASDESSILDYISGITEGFYRNEAIRSAFEEFLQ 240

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDP 270
            ++  +    E +    +K +  +++ KI RDD      +A          ED       
Sbjct: 241 GWAEFVRGRSESELYEELKKFVQESLRKISRDDWRRSAERAFQRVFRRIRPEDLSPFMGE 300

Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----- 325
             + +IID     G V    +    ++      +   + L R  + G  +D  L+     
Sbjct: 301 IGVSEIID----SGQVTIIDMSGFSNEAKLSLFLSLAEELKRRMVRGQRMDIALIIDEAP 356

Query: 326 -----KSDGSYTYFAADL 338
                + DG       ++
Sbjct: 357 QYCPYRPDGIQLRATEEI 374


>gi|189425175|ref|YP_001952352.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421434|gb|ACD95832.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 825

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K                  +     +E     P+G +H+GH R   +GD +       G
Sbjct: 14  AKWQQQWEAQKTFKVTEDPSRKKYYLLEMF-PYPSGRIHMGHVRNYSIGDVVGRFKRMRG 72

Query: 159 YEV 161
           + V
Sbjct: 73  FNV 75


>gi|118595199|ref|ZP_01552546.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440977|gb|EAV47604.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 810

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L K + S       +  +      K     +   P+G +H+GH R   +GD ++      
Sbjct: 10  LEKNIQSEWAEKKAFEASEGSPKEKFYALCMFPYPSGKLHMGHVRNYAIGDVISRFKRLR 69

Query: 158 GYEVT 162
           G+ V 
Sbjct: 70  GFNVM 74



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 75/203 (36%), Gaps = 19/203 (9%)

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
           + T   D   +   + +     D D+ +L  D    Y+   + Y+    E    +++Y  
Sbjct: 483 RETDTLDTFFESSWYFARYASFDQDKQML--DKRANYWLP-VDYYIGGIEHAILHLLY-- 537

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
               + +  RL      ++ K+    +L   +V   +DG   KMSK  G+ +  + ++D+
Sbjct: 538 ----ARFFNRLLYDLKLINTKEPFKKLLTQGMV--LKDGA--KMSKSKGNTVDPQDLIDK 589

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF---YVQYAYARCRSIFRQAKDIFP 473
            G+D+ R  +++   +E          E  + +  F     +  Y        Q      
Sbjct: 590 YGADTARLFIMFAAPAEQ---SLEWSDEGIEGSHRFLKRLWKLVYEFIDHKEEQETSNVI 646

Query: 474 DLDFDLFPRNVIPQESEFDTSEL 496
           +++ +L  +     E   D  E 
Sbjct: 647 EINQELKYKLNATIEKVTDDLER 669


>gi|118591434|ref|ZP_01548832.1| leucyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436106|gb|EAV42749.1| leucyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 873

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +         +    N   +     +E     P+G +H+GH R   +GD +A  
Sbjct: 8   AREVEARWQKVWNDKDVFVTHNDDPRDKYYVLEMF-PYPSGRIHMGHVRNYAMGDVVARY 66

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 67  KRAKGFNV 74


>gi|91773332|ref|YP_566024.1| leucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121686761|sp|Q12WA2|SYL_METBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91712347|gb|ABE52274.1| Leucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 962

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 50/180 (27%), Gaps = 15/180 (8%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K       S +            + I +   N  G +H GH R   +GD +A      G
Sbjct: 12  QKWQQKWNESKVFEAEADDRDKYFITIPYPYLN--GNLHAGHTRTFTIGDVVARYKRMMG 69

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELA 214
             V     +++   G  I  LA  +  R  +   +Y     +P     G        +  
Sbjct: 70  NNVLYPMGFHV--TGTPIVGLAELIQNRDPETMKVYTEFHGIPVETLKG-------MDTP 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +K         E     I      +        + K         + E D       P++
Sbjct: 121 EKIVDYFSVEAERSMRSIGYSIDWRRKFTTTDPNYKKFIEWQFNLLYEKDLIVKGSHPVK 180


>gi|317125577|ref|YP_004099689.1| DALR anticodon binding domain protein [Intrasporangium calvum DSM
           43043]
 gi|315589665|gb|ADU48962.1| DALR anticodon binding domain protein [Intrasporangium calvum DSM
           43043]
          Length = 277

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 16/105 (15%)

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV----------QYAYARCR 462
           ++DEV      + +L  + S     +     E  +   V             Q A+AR  
Sbjct: 107 IIDEVTEQEATYGLLRGQRSSDEGLEADPALETDRSTVVPAWLRDDPALRPAQLAHARLH 166

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
            + R A+     +      R    +E     +E  L+V LA++P+
Sbjct: 167 RLMRTARAAGVQI------RPTDRREELGHVAERLLLVALADFPQ 205


>gi|307215206|gb|EFN89978.1| Probable glutamyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 507

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 101/305 (33%), Gaps = 37/305 (12%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
            +  +  +    K   V + F + +PTG +H+G  R A+     A      G  + R   
Sbjct: 8   AANFQVLQKRFFKKHHVRVRF-APSPTGNLHLGGLRTALYNYLFAR--RKQGAFILR--- 61

Query: 167 INDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
           I D   Q   +  ++       L+     D D   G   G Y +    EL  +   +LL+
Sbjct: 62  IEDT-DQTRIVPDAIEKLQDDLLWAGIISDEDPIRGGPVGPYKQSARLELYQEQVLKLLD 120

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                +     +  +  + K   + +K   +          +        +D +  + R+
Sbjct: 121 NG-SAYYCFCTEERLVLLRK---EAMKCRQVPR--------YDNRCRHYSKDEVKEMLRK 168

Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                      K   T +   D         +   + D  ++K+DG  TY  A++     
Sbjct: 169 N---RSPCIRFKLSCTPESFCDMIYGDVTHDIAKTEGDPVIIKADGYPTYHFANV----- 220

Query: 344 KYERGFDNMIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             +  F  + +V+ G +      +   +  A   +       +   + L  +    K+SK
Sbjct: 221 -VDDHFMKISHVLRGIEWQVSTPKHIMLYKAFGWEPP-----IYGHLPLILNTDGSKLSK 274

Query: 403 RAGDF 407
           R GD 
Sbjct: 275 RQGDI 279


>gi|303243683|ref|ZP_07330024.1| glutamyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485925|gb|EFL48848.1| glutamyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 556

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 28/146 (19%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+N +K         K ++ +I+ E P       L      + ++ +      IA+
Sbjct: 6   LKYVLQNSIK--FKGKANPKAVIGKILAENP------DL-----RVKAKEVSKIVAEIAK 52

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
             V  + ++     +           ++P +L    ++     +      +     + + 
Sbjct: 53  E-VESMTLEEQKAKLEE---------IAPEFLEAKTTTRKRKEL-----ALKNVKDIVVM 97

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLAS 152
             + NP+GP+H+GH R AV+ D  + 
Sbjct: 98  RFAPNPSGPLHLGHARAAVLNDYFSK 123


>gi|254500314|ref|ZP_05112465.1| glutamyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222436385|gb|EEE43064.1| glutamyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 115/353 (32%), Gaps = 75/353 (21%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLA------SLMAFSGYEVTREYYINDAGAQINTL 177
            +   + +PTG +H+G  R A+     A       L+     +  R          ++ L
Sbjct: 5   IVTRFAPSPTGFLHIGGARTALFNWLFAKHHGGKMLLRIEDTDRARS-----TQEAVDAL 59

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              + W     L  +   + +      + + V + L +  +    + PEE  +  +++ +
Sbjct: 60  MDGLSWL---GLDWDGEPISQFSRVARHEEVVDQMLENGTAYRCYSTPEE--VDAMREKA 114

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
                    D         D   SE       P  I  +I             L  P+  
Sbjct: 115 RAEGRPPRYD-----GTWRDKDASEA------PEGIDPVI------------RLKAPQDG 151

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
            T   DM + +++  +  + D     LL+SDG+ TY    LA     ++ G  ++I   G
Sbjct: 152 ETVVDDMVQGRVVIPNKDLDDF---VLLRSDGTPTYM---LAVVVDDHDMGITHIIR--G 203

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF---------- 407
            DH     R   +  A      ++       + L       K+SKR G            
Sbjct: 204 VDHLTNAARQTLIFDANGWDVPKMAH-----IPLIHGPDGAKLSKRHGATGAEAYRALGY 258

Query: 408 --ITLRHVVDEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
               +R+ +  +G            D V++  +         FDF K++  + 
Sbjct: 259 LPQAMRNYLARLGWSHGDEEIMSLEDMVKWFGMDAVGQSAARFDFKKLENLNG 311


>gi|241663639|ref|YP_002981999.1| valyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865666|gb|ACS63327.1| valyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 958

 Score = 40.7 bits (94), Expect = 0.78,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 62/212 (29%), Gaps = 44/212 (20%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           +K  ++    G+       GK     I+    N TG +H+GH     + D L      SG
Sbjct: 19  QKWSAAWEAMGVSRATLEAGKPDFC-IQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMSG 77

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                    + AG   QI                                  V +   D 
Sbjct: 78  ANTLWVPGTDHAGIATQI----------------------------------VVERQLDA 103

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PI 273
                 +   EK++  V ++  Q+   I R  ++ +    D    E ++   DP     +
Sbjct: 104 QGVSRHDMGREKFVEKVWEWKEQSGSTITRQ-VRRMGASID---WEREYFTMDPKMSRAV 159

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            D+   L  QG +Y G               D
Sbjct: 160 SDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSD 191


>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 459

 Score = 40.7 bits (94), Expect = 0.79,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 104/336 (30%), Gaps = 91/336 (27%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D +A  + + GY +T                      Y + + + D  +
Sbjct: 37  HIGHGRTFVSFDVIARYLRYLGYHLT----------------------YVRNITDVDDKI 74

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                       + + L +  + E L               V  M+  +  D  ALNIQ 
Sbjct: 75  ------------IKRALENHETCEHL---------------VDRMVAEMYKDFDALNIQR 107

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----------EGILPPPKSKTTQKCDMD 305
             F      H  +   I  ++  L   G+ Y           +      K        + 
Sbjct: 108 PDFEPRATHHIPE---IIALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQ 164

Query: 306 RKQLLFRSTMVGDDVDRPLLK-------------SDGSYTYFAADLAYFKCKYERGFDNM 352
               +  + +  + +D  L K               G   +     A    +    FD  
Sbjct: 165 AGARVEINDIKKNPMDFVLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFD-- 222

Query: 353 IYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           I+  GSD     H   + +            A +N  L   + +       KMSK  G+F
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGG-----AYVNYWLHSGMIMVD---KEKMSKSLGNF 274

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
            T+R V+    ++SVR+ +L       L++    +K
Sbjct: 275 FTIRDVLQHYDAESVRYFLLTAHYRSQLNYSEENLK 310


>gi|300693845|ref|YP_003749818.1| leucine--tRNA ligase (leus) [Ralstonia solanacearum PSI07]
 gi|299075882|emb|CBJ35192.1| putative leucine--tRNA ligase (leuS) [Ralstonia solanacearum PSI07]
          Length = 738

 Score = 40.7 bits (94), Expect = 0.79,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ L             +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 18  PASLEPHWQRAWQDARVFEADRHRGRPKWFIVELPPFATGRLHLGHARNYVLADAGARFK 77

Query: 155 AFSGYEV 161
              GY+V
Sbjct: 78  RMQGYDV 84


>gi|254429556|ref|ZP_05043263.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195725|gb|EDX90684.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 460

 Score = 40.7 bits (94), Expect = 0.79,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 117/384 (30%), Gaps = 58/384 (15%)

Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176
                ++ +          +H+G+ R  VV D L  L+           Y N        
Sbjct: 18  PLDPDRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRL--------YPN-------- 61

Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWLPIVK 234
               V+ R    +  +D  +      G  +  + +     ++ ++  LN      +P   
Sbjct: 62  ---VVYARNITDI--DDKIIKAAAENGEDISVLTERFTAAFAEDMASLNAKTPNIIPKAT 116

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPP 293
           D+  +              IQ    + E          +   ++++   G +    +   
Sbjct: 117 DHIPEM-------------IQMIATLVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDM 163

Query: 294 PKSKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349
                 +  D  R      L   S+      + P  +    +    + +        +  
Sbjct: 164 LAGARVEVADYKRHPGDFILWKPSSDEQPGWESPWGRGRPGWHIECSAM------IHKHL 217

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
            ++I + G          E   A         + +   L   Y +    KMSK  G+F  
Sbjct: 218 GDVIDIHGGGQDLIFPHHENEIAQ-GCCAHGTDYVRYWLHNGYINIDGEKMSKSLGNFRL 276

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQA 468
           +R ++ +   + +RF +L       L+F    +    K  + ++Y         ++  + 
Sbjct: 277 VRDLLTQYHGEILRFALLSSHYRSPLNFSADVLDNAEKGLDTLYY---------ALLGRG 327

Query: 469 KDIFPDLDFDLFPRNVIPQESEFD 492
           + + P+ D+ L   + +    + D
Sbjct: 328 ETVAPEADYQLPDNHPVLDALKDD 351


>gi|163869196|ref|YP_001610448.1| leucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189082982|sp|A9IYY8|SYL_BART1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161018895|emb|CAK02453.1| Leucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    K    I      +         K  +  +   P+G +H+GH R   +GD +A
Sbjct: 13  RYNPRAREKKWQEIWDEKKIFQTVQGDGREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVA 72

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 73  RYKRAKGFNV 82


>gi|153827452|ref|ZP_01980119.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149738629|gb|EDM52982.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 405

 Score = 40.7 bits (94), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|325956509|ref|YP_004291921.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333074|gb|ADZ06982.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327183337|gb|AEA31784.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 927

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 92/273 (33%), Gaps = 50/273 (18%)

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSPIRD 275
           L    + +++P      +  M+K  R D      +A  +   IF +ED      P  I  
Sbjct: 423 LDQIDKAEFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEH 481

Query: 276 IIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           I     ++G            + +G             + D   + F S   G      +
Sbjct: 482 IAKIFEKEGSNAWYTHTAKELLPDGFTSEHSPNGEFTKEKDILDVWFDS---GSSWSGVM 538

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
            K DG   +F ADL               Y+ GSD   G+       + AV+ K     V
Sbjct: 539 EKRDG--LHFPADL---------------YLEGSDQYRGWFNSSLITSVAVTGKAPYKEV 581

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           L    V    D    KMSK  G+ I+   V+  +G++ +R  +     +  +      ++
Sbjct: 582 LSQGFV---LDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQADTTSDVAVSMGILQ 638

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           + ++          Y + R+ FR       D D
Sbjct: 639 QSAEG---------YRKIRNTFRYMLANTSDFD 662


>gi|262371100|ref|ZP_06064422.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313986|gb|EEY95031.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 873

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIE----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           ++ P Y    +   V    E    +      +G +  I  +   P+G +H+GH R   +G
Sbjct: 4   HIDPEYQASAIEPTVQHDWEARKAFKVADSVEGPRRYILSMFPYPSGKLHMGHVRNYTIG 63

Query: 148 DTLASLMAFSG 158
           D ++      G
Sbjct: 64  DVISRFHRLKG 74


>gi|323343130|ref|ZP_08083361.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463194|gb|EFY08389.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 800

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ GS+H+     Y +    V   +   + K     L  + + L  +    KMSK  G+
Sbjct: 525 LYMGGSEHAVLHLLYARFWHKVLFDLGVVDTKEPFGKLYHQGMILGAN--NEKMSKSRGN 582

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            +    +V+  G+D++R   +
Sbjct: 583 VVNPDDIVESHGADALRVYEM 603


>gi|269798025|ref|YP_003311925.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094654|gb|ACZ24645.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 822

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +         K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMK 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 474

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 78/242 (32%), Gaps = 35/242 (14%)

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISED-DFHRGDPSPIRDIID---NLARQGYVY-- 287
           +D   QA+ +I  D+        D                I++II+    L  +G+ Y  
Sbjct: 82  RDMDCQALSEIYIDEFHR---DMDALAVLRPTLEPRATEFIKEIIEVTSKLVEKGHAYVV 138

Query: 288 --------EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS------------ 327
                          K    +  DM+    +   +   D  D  L K+            
Sbjct: 139 DGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSRKKDPFDFALWKAKKPGEPAWESPW 198

Query: 328 -DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386
            +G   +     A    +    FD    + G          E   A  SE       +  
Sbjct: 199 GEGRPGWHIECSAMSWSRLGETFD----IHGGGQDLIFPHHENEVAQ-SEAAFGQQFVRY 253

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
            +   + +    KMSK   +F+T++ ++D+   ++VR  +L +     +DF    +KE +
Sbjct: 254 WMHNGFVNIDSEKMSKSLNNFLTVKEILDQFHPEAVRLFLLSKHYRSPVDFTEQAMKEAA 313

Query: 447 KE 448
             
Sbjct: 314 SG 315


>gi|162455699|ref|YP_001618066.1| leucyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|189083150|sp|A9EYY7|SYL_SORC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161166281|emb|CAN97586.1| leuS [Sorangium cellulosum 'So ce 56']
          Length = 854

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H      Y +    V   +   K       L+ + + L  D    KMSK  G+
Sbjct: 583 LYVGGAEHGVLHLLYARFWHKVLYDLGHVKHPEPFAKLVHQGMILGED--NEKMSKSRGN 640

Query: 407 FITLRHVVDEVGSDSVR 423
            I    +V   G+D +R
Sbjct: 641 VINPDDIVRAHGADVLR 657


>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 493

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 113/336 (33%), Gaps = 50/336 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  V  D L   +   GYEV    Y+         +   +  R ++   +  S  
Sbjct: 30  HIGHARVYVTFDVLLRYLKHLGYEV---SYV----RNFTDVDDKIIARAKELEEDPIS-- 80

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLK---A 251
                       + +   ++++ ++      +    P V D+  Q ++ +I+  L    A
Sbjct: 81  ------------LSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQ-IIDLIKQILDNGYA 127

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  DI+ S D F        R + DN A +    +     P      K   + +    
Sbjct: 128 YKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPFW- 186

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
                    + P  +    +    + +  AY    ++     M  ++   H   + +  A
Sbjct: 187 ---------ESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGM-DLVFPHHENEIAQSCA 236

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                    + I+  +             KMSK  G+F T+R V+D     ++R  ++  
Sbjct: 237 AC-----DSSNISYWIHNGFVTVDS---EKMSKSLGNFFTIRQVIDLYHPLALRLFLMGT 288

Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
                +++    ++  S+   +FY+      C S  
Sbjct: 289 HYRSPINYSDFLLESASER--IFYIYQTLHDCESAL 322


>gi|330798120|ref|XP_003287103.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum]
 gi|325082881|gb|EGC36349.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum]
          Length = 911

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             P+G +H+GH R   + D +A L    GY+V 
Sbjct: 60  PYPSGNLHMGHVRVYSISDCIARLKRMQGYDVI 92


>gi|326403977|ref|YP_004284059.1| valyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050839|dbj|BAJ81177.1| valyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 891

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 54/200 (27%), Gaps = 35/200 (17%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N    P+     L  +      +  +     T   I     N TG +HVGH     + D 
Sbjct: 5   NF--DPAAFESRLYGLWEQAGAFAADPSRAATPFTIMIPPPNVTGSLHVGHALTMTLQDV 62

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L      +G +   +   + AG     +      R                  G   + +
Sbjct: 63  LIRHHRMNGRDALWQPGTDHAGIATQLMVERELQRE-----------------GTSRQEI 105

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
           G+   D +   +  +  E+   I +              L+ L    D          G 
Sbjct: 106 GR---DAFLDRVWTWKAEQGGNITRQ-------------LRRLGASPDWSRERFTMDEGL 149

Query: 270 PSPIRDIIDNLARQGYVYEG 289
              +R I   L   G +Y  
Sbjct: 150 SKAVRTIFVRLFNDGLIYRA 169



 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +     +         V  +   IN        L RD    KMSK  G+
Sbjct: 498 TGFD-IIFFWVAR---MIMMGMYAMGDVPFRTVMIN-------GLVRDERGQKMSKTKGN 546

Query: 407 FITLRHVVDEVGSDSVRFMMLWRK 430
            I    ++D+ G+D++R+ ++ + 
Sbjct: 547 VIDPLALIDQFGADALRYTVIAQS 570


>gi|307111087|gb|EFN59322.1| hypothetical protein CHLNCDRAFT_137710 [Chlorella variabilis]
          Length = 1113

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 6/100 (6%)

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K ++ERGF       G D   G+   L  ++ A+   K     L+C  + L  DG   KM
Sbjct: 564 KERFERGFPADFVAEGLDQTRGWFYTLMVLSTAL-FDKPAFKNLVCNGLVLAADGK--KM 620

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSELLDFD 438
           SKR  ++     VV++ G+D++R  ++      +E L F 
Sbjct: 621 SKRLKNYPDPMEVVNKHGADALRLYLINSPVVRAETLKFK 660


>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 922

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A++       +L    V    DG   KMSK  G+ I  +
Sbjct: 549 LYLEGSDQHRGWFNSSLITSVAINGYAPYKGLLTHGFV---LDGEGRKMSKSLGNVIIPQ 605

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D+ G+D +R  +     +  +      +K+ S+          Y + R+ FR     
Sbjct: 606 KVMDQYGADILRLWVASVDYTADVRISMDMLKQVSE---------VYRKIRNTFRFLHGN 656

Query: 472 FPDLD 476
             D D
Sbjct: 657 IADFD 661


>gi|126740704|ref|ZP_01756390.1| valyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126718219|gb|EBA14935.1| valyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 1023

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L  LV   RD    KMSK  G+ +    ++DE G+D++
Sbjct: 634 WVARMMMMQLAVVDQIPFDTVYLHGLV---RDAKGKKMSKSTGNVVDPLEIIDEFGADAL 690

Query: 423 RF 424
           RF
Sbjct: 691 RF 692


>gi|15806352|ref|NP_295058.1| isoleucyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81551300|sp|Q9RUP8|SYI_DEIRA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|6459088|gb|AAF10907.1|AE001980_2 isoleucyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 1078

 Score = 40.7 bits (94), Expect = 0.80,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 33/168 (19%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + ++ A  NV+    +    D   +KMSK  G+ +    + D+ 
Sbjct: 599 DQTRGWFYSLHAISTMLYDQPAYKNVICLGHIV---DEKGLKMSKSKGNVVAPLPLFDQY 655

Query: 418 GSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE--NPV-----FYVQYAYARCRSIFRQAK 469
           G+DSVR +M +     +   F    V E  +   N +     F+V YA            
Sbjct: 656 GADSVRWYMFMASDPGDQKRFSERLVAEAQRSYVNTLWNVYSFFVLYA------------ 703

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
                 + D       P  +E    +  L   LA     + + T A E
Sbjct: 704 ------NLDQPDLAAAPAVAERPEMDRWL---LARLEETVRDVTAALE 742


>gi|254510996|ref|ZP_05123063.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534707|gb|EEE37695.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 861

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K   +   + I    +   K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 22  AKWQKAWDKAEIFTANHKADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARHKLATG 80

Query: 159 YEV 161
           + V
Sbjct: 81  HNV 83


>gi|167957600|ref|ZP_02544674.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 493

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 15/149 (10%)

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFA----ADLAYFKCKYERGFDNMIYVMGSDH- 360
           RK L +  ++ GDD     +  D    Y       D   ++  +       + V+G D  
Sbjct: 207 RKNLAWGVSVPGDDNQVIYVWIDALSNYITVLGYPDDESWRDYWPAN----VQVVGKDIL 262

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             +     A+  A+     +  ++      +  DG   KMSK  G+ ++   V+D  G+D
Sbjct: 263 RFHAIIWPAILMALGLPLPKQILVHG---HIGFDGK--KMSKSLGNVVSPNEVIDTYGAD 317

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + R+    R    L D DF   K +   N
Sbjct: 318 AFRYYF-SRHIPTLDDGDFTWEKFEKAYN 345


>gi|153820000|ref|ZP_01972667.1| leucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509451|gb|EAZ72045.1| leucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 408

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|121729823|ref|ZP_01682256.1| leucyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628427|gb|EAX60921.1| leucyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 42  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 101

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 102 QRLQGKNV 109


>gi|113955156|ref|YP_730582.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132569|sp|Q0IAE0|SYL_SYNS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113882507|gb|ABI47465.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 867

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGDTLASLMA 155
            L +   ++      Y       G +          P+G +H+GH R  V+ D +A +  
Sbjct: 23  ALEERWQALWKEQRLYETQDPKPGQRAFYALSMFPYPSGTLHMGHVRNYVITDVIARVQR 82

Query: 156 FSG 158
             G
Sbjct: 83  MRG 85


>gi|58038885|ref|YP_190849.1| leucyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819158|sp|Q5FTV3|SYL_GLUOX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58001299|gb|AAW60193.1| Leucyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 865

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +       +       +          +     +E     P+G +HVGH R   +GD +A
Sbjct: 11  FQDREPFWQNEWKRRNTFAVPDVPPADRPKYYVLEMF-PYPSGQLHVGHVRNYTLGDVVA 69

Query: 152 SLMAFSGY 159
                 G+
Sbjct: 70  RYKRARGF 77


>gi|222824160|ref|YP_002575734.1| isoleucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782380|sp|B9KD44|SYI_CAMLR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222539382|gb|ACM64483.1| isoleucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 921

 Score = 40.3 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 22/176 (12%)

Query: 344 KYERG-FDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
           +Y+ G +   +Y+ GSD   G+ +    ++ A++ K    N+L         D    KMS
Sbjct: 556 RYDAGEYQASMYLEGSDQHRGWFQSSLLISTAINHKTPYKNILTHGF---TVDEKGQKMS 612

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461
           K  G+ +  ++V    G + +R  ++    S  L      +K+ S++         Y + 
Sbjct: 613 KSKGNVVLPQNVAKNYGVEILRLWIMLSDYSTDLKISDNILKQVSEQ---------YRKI 663

Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           R+  R       D++F       +  +         L+     +  + ENA    E
Sbjct: 664 RNTIRFLLANTNDIEFVETKNFTLLDK-------WILMRAKIAF-EICENAFEKYE 711


>gi|331268984|ref|YP_004395476.1| glutamate--tRNA ligase [Clostridium botulinum BKT015925]
 gi|329125534|gb|AEB75479.1| glutamate--tRNA ligase [Clostridium botulinum BKT015925]
          Length = 487

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 114/373 (30%), Gaps = 49/373 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A        +        D G  +      ++   +  
Sbjct: 11  APSPTGYMHVGNLRTALYTYLIA---KHDNGKFILRIEDTDQGRYVEGAVDVIYKTLKMT 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +D     G   G Y++   + L   Y+ EL+   E  +        + + +K     
Sbjct: 68  GLTHDEGPDIGGPVGPYVQSERRGLYLGYAKELVEKGE-AYYCFCDKERLDS-LKETSGT 125

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            K      +I   E              ++     G  Y      P    T   D     
Sbjct: 126 FKYDGHCRNISKEE--------------VEEKLALGIPYVIRQKNPLDGETTFEDEIYGT 171

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   ++ +    D  L+KSDG  TY   + A     +  G  ++  V G+++     +  
Sbjct: 172 ITVDNSEL---EDMILIKSDGLPTY---NFANVIDDHLMGITHV--VRGNEYLSSAPKYN 223

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMML 427
            +  A              +          K+SKR GD      +      D+ V F+ L
Sbjct: 224 RLYNAFGWDIPTYIHCPPIM-----KDAHNKLSKRNGDASFEDLLAKGYLKDAVVNFIAL 278

Query: 428 WRKN--SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485
              N  +    F   ++ EQ          Y          +A  IF  +         I
Sbjct: 279 LGWNPGTNQEIFTLEELVEQFD--------YRNIH------KAPSIFDTIKLKWMNGEYI 324

Query: 486 PQESEFDTSELQL 498
            + S  +  E  L
Sbjct: 325 KKLSLEEFHEYAL 337


>gi|307942164|ref|ZP_07657515.1| glutamyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774450|gb|EFO33660.1| glutamyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 471

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 127/400 (31%), Gaps = 72/400 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+    LA     +G              +I     +   +    
Sbjct: 10  APSPTGFLHIGGARTALFNWLLA---KHNG---------GKMLLRIEDTDRARSTQEAVD 57

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
              +     E  + G  +   G+   D++   +    E         Y+    +  +R++
Sbjct: 58  ALIDGLTWLELDWDGEPVSQFGR--LDRHKEVVDQLLESGAAYRC--YATSEELTQMREE 113

Query: 249 LKALNI--QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
            KA  +  ++D                RD   + A +G      L  P    T   D  +
Sbjct: 114 QKAAGLPPRYD-------------GRWRDRDPSEAPEGVAPAIRLKSPLDGETVIDDEVQ 160

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
            ++ F +  +    D  +++SDG+ TY    LA     ++ G  ++  V G DH     +
Sbjct: 161 GRVAFPNKDLD---DLVIMRSDGTPTYM---LAVVIDDHDMGVTHV--VRGDDHLTNSAK 212

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF------------ITLRHVV 414
              +  A+        +     + L       K+SKR G                +R+ +
Sbjct: 213 QALIYKALGWD-----IPSMAHIPLIHGPDGAKLSKRHGALGAEAYREMGYLPAAMRNYL 267

Query: 415 DEVG-----------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE---NPVFYVQYAYAR 460
             +G            D V++  L         FDF K++  +     +        + +
Sbjct: 268 ARLGWSHGDEEIMSTQDMVKWFSLDAVGKSASRFDFKKLENLNGHYMRSTGDADLLKHLK 327

Query: 461 CRSIFRQAKDIFPD--LDFDLFPRNVIPQESEFDTSELQL 498
                 +  +       D +      +P   E   + ++L
Sbjct: 328 VYLSHVEGGETVLSWLADNEATALAALPGLKERAKTLVEL 367


>gi|303244593|ref|ZP_07330926.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485019|gb|EFL47950.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 1056

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 7/131 (5%)

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMP 397
           A    K  +  D +  V G+D    V +      A+SE     I    C +     D   
Sbjct: 564 ASINAKKLKKADFI--VEGNDQ---VTKWFYSQHALSEIVFNDIPYKKCMMHGFALDENG 618

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQY 456
            KMSK  G+ +    VV+E G+D +R+ +L    + E + F + ++ E        +  Y
Sbjct: 619 NKMSKSLGNVVNPDDVVEEYGADLLRYYLLSANKAWEDIRFSYKELGEIKSLFNTLWNSY 678

Query: 457 AYARCRSIFRQ 467
           A+A    +   
Sbjct: 679 AFAVNYMVLDN 689


>gi|291224246|ref|XP_002732116.1| PREDICTED: valyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 1058

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 59/199 (29%), Gaps = 41/199 (20%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           S+  K+       G    +  I +G     I     N TG +H+GH   + V D L    
Sbjct: 104 SWWEKMQFFKPEYGHGPLKEEIARGKNVFMICIPPPNVTGSLHLGHALTSSVQDALVRWH 163

Query: 155 AFSG----YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
              G    +    +     AG     +     +R +Q   ++                  
Sbjct: 164 RMKGEITLWNPGCD----HAGIATQVVVEKKLFREKQLTRHDLGR--------------- 204

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
               DK+  E+  +  EK                I D LKA+   +D   +         
Sbjct: 205 ----DKFVDEVWKWKNEKG-------------DRIYDQLKAMGSSYDWDRTCFTMDDKLS 247

Query: 271 SPIRDIIDNLARQGYVYEG 289
             +++    L  +G +Y  
Sbjct: 248 RAVKESFVRLHEEGVIYRS 266


>gi|281412227|ref|YP_003346306.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373330|gb|ADA66892.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 824

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 6   PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 65

Query: 155 AFSGYEV 161
              GY V
Sbjct: 66  RMRGYNV 72


>gi|148981396|ref|ZP_01816392.1| leucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960888|gb|EDK26218.1| leucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|148269892|ref|YP_001244352.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|172047877|sp|A5IKQ3|SYL_THEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147735436|gb|ABQ46776.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 824

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 6   PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 65

Query: 155 AFSGYEV 161
              GY V
Sbjct: 66  RMRGYNV 72


>gi|15679374|ref|NP_276491.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334357|sp|O27428|SYI_METTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2622484|gb|AAB85852.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 1044

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKV 442
           +L     L  +G   KMSK  G+ +    V+++ G+D +RF +LW     E L F + ++
Sbjct: 578 VLMHGFTLDEEGR--KMSKSLGNVVEPEDVIEKYGADVLRFYLLWENKPWEDLKFVWDEL 635

Query: 443 KEQSK 447
           +  +K
Sbjct: 636 RNVNK 640


>gi|76799721|ref|ZP_00781816.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76584925|gb|EAO61588.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 475

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G   + K   ELL+   +K++     Y  +A+ KI    L  
Sbjct: 66  -------GITPQEYVD--GMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G +  G+ P       +   +  + 
Sbjct: 117 GDIYLGEYTGWYSVSDEEFFTESQLAEVYRD--ENGNMIGGVAPS----GHEVEKVSEES 170

Query: 309 LLFRSTMVGDDV------DRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
             FR +   D +          ++ DG               DLA  +  Y  G      
Sbjct: 171 YFFRMSKYADRLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSN 230

Query: 349 FDNMIYV---------------MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             ++IYV                  D S Y K   A    + +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMAL 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DLPLPKRLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 339


>gi|332886196|gb|EGK06440.1| glutamyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 504

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 95/292 (32%), Gaps = 34/292 (11%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + F + +PTGP+H+G  R A+     A     +G  + R   I D  +Q       
Sbjct: 3   QKVRVRF-APSPTGPLHIGGVRTALYNYLFAK--KNNGDFILR---IEDTDSQ--RFVPG 54

Query: 181 VFWRYQQALY----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236
                 +AL       D     G     Y +   KE+  KY   L+           K  
Sbjct: 55  AEEYIIEALTWLGLKFDEGTHIGGTHAPYRQSERKEIYKKYVDILIQ----------KGA 104

Query: 237 SVQAMMKIIRDDLKALNI-QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  A         K   +       S     R   +  ++ + +L   G  Y        
Sbjct: 105 AYIAFDTPEELTAKREAVSNFQYDASTRGEMRNSLTLSQEEVQSLIDAGNQYVVRFKIEA 164

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIY 354
            +     D+ R ++ + S+++    D+ L KS D   TY    LA     +     ++I 
Sbjct: 165 GQEVLVNDVIRGEVKYNSSVLD---DKVLYKSADHLPTYH---LANIVDDHLMEITHVIR 218

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             G +          +  A   + +        L+         K+SKR GD
Sbjct: 219 --GEEWLPSAPLHVLLYKAFGWEDSMPQFAHLPLLLKPEG--NGKLSKRDGD 266


>gi|262037397|ref|ZP_06010861.1| leucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748559|gb|EEY35934.1| leucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         +    N +       +  + A P+G +HVGH R   +GD +A      G+
Sbjct: 13  KWQEKWQEKNLFKSENRVDGKENYYVLEMFAYPSGKLHVGHLRNYAIGDAVARYKKMRGF 72

Query: 160 EV 161
            +
Sbjct: 73  NI 74


>gi|163791030|ref|ZP_02185451.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873675|gb|EDP67758.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 675

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 110/346 (31%), Gaps = 69/346 (19%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G+    +  D +A       Y+  ++          +   L+    + Q + N
Sbjct: 16  PSGKLHIGNAYSTIACDVMAR------YKRMQD---------FDVFYLTGSDEHGQKIEN 60

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
              +L     P  Y+  + K + + +  ELL    +K++        + +  I    L  
Sbjct: 61  KAQEL--NITPQEYVDEMAKGMQNLW--ELLEISNDKFIRTTDPIHEKVVADIFERFLAQ 116

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +I  D +                ++D          G   P      +    +     F
Sbjct: 117 GDIYLDEYEGWYSVPDETFYTETQLVDVERDAEGTIIGGKSPDSGHPVELIKEESY--FF 174

Query: 312 RSTMVGD----------DVDRPLLKSDGSYTYF----AADLA------YFKCKYERGFDN 351
           R +   D          D  +P  + +     F      DLA       +  K      +
Sbjct: 175 RMSKYADRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKH 234

Query: 352 MIYVM-------------GSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRD--- 394
           +IYV              G+D +    +   A    V ++  + + +   ++ +  D   
Sbjct: 235 VIYVWIDALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPL 294

Query: 395 -----------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                          KMSK  G+ +    +V++ G D++R+ ++  
Sbjct: 295 PKKIFGHGWLLMKEGKMSKSKGNVVYPEMLVEQYGLDALRYYLMRE 340


>gi|161527875|ref|YP_001581701.1| leucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339176|gb|ABX12263.1| leucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 955

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 8/140 (5%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           + ++ + +     +      ++  N   K  K  I      P  P H+GH R   + D  
Sbjct: 1   MTINWTDIETKWRNKWQENKDFETNPNDKPKKF-ITVAYPYPNSPQHIGHGRTYTLADVH 59

Query: 151 ASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPG-VY 205
           A      GY V     ++    G  +  +A  +    ++ L    N   +PE      V 
Sbjct: 60  ARFYRMKGYNVLFPMGFHY--TGTPVLGMAKRIEAGEKEILDGLRNIYHVPEDAIKTFVE 117

Query: 206 LKHVGKELADKYSSELLNFP 225
              +     ++  S ++   
Sbjct: 118 PIKIADYFHEEIKSGMIEMG 137


>gi|61657367|emb|CAI44284.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 843

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 25  PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 84

Query: 155 AFSGYEV 161
              GY V
Sbjct: 85  RMRGYNV 91


>gi|49474279|ref|YP_032321.1| glutamyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|67461955|sp|Q6FZN9|SYE2_BARQU RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|49239783|emb|CAF26173.1| Glutamyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 475

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 100/302 (33%), Gaps = 50/302 (16%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I   + +PTG +H+G  R A+     A     +G ++       D      T   ++  
Sbjct: 3   VITRFAPSPTGFLHIGSARTALFNWLYA---KHTGGKMLLRIEDTDRERSTETALKAIID 59

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
                  + D D    +      + V K+L  K       +   + L  +++ +      
Sbjct: 60  GLHWMGLSYDGDPISQFERAERHRQVAKQLV-KDGKAYYCYASPEELAEMRENARAEGRP 118

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
              D         D  ISE       P  ++ +I             +  P+   T   D
Sbjct: 119 PRYD-----GRWRDRDISEA------PKGVKPVI------------RIKAPQDGETVLHD 155

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
             +  + F +  + D +   +L+SDGS TY     A     ++ G  ++I   G DH   
Sbjct: 156 RVQGDVRFPNKDLDDFI---ILRSDGSPTYMH---AVVVDDHDMGVTHIIR--GDDHLTN 207

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             R   +  A+        + +   + L       K+SKR G           +G D+ R
Sbjct: 208 AARQTIIFNALGWD-----IPVMAHIPLIHGENGAKLSKRHG----------ALGVDAYR 252

Query: 424 FM 425
            M
Sbjct: 253 IM 254


>gi|14600670|ref|NP_147189.1| isoleucyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|8928379|sp|Q9YF67|SYI_AERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5104013|dbj|BAA79329.1| isoleucyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 1064

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 96/307 (31%), Gaps = 32/307 (10%)

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDL----KALNIQHDIFISEDDFHRGDPSPIRDI 276
           +    + +W P         M++ +RD +    +   I   ++      +          
Sbjct: 432 MREAEKVEWQPGWAKTRFMNMLRELRDWVISRQRYWGIPLPVWRCSSCGYEHVVGS---- 487

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
           ++ L   G      L  P     +         + R   V D     +    G   Y + 
Sbjct: 488 VEELESMGGRRPENLHRPWVDRVELKCPRCGGSMKRVPDVLD-----VWFDSGIAFYAS- 541

Query: 337 DLAYFKCK--YERGFDNMIYVMGSDH--SGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
            L Y + +  +ER       V G D     +   L +      E   +  ++    +   
Sbjct: 542 -LGYPRDRETWERLKPVDFIVEGHDQIRGWFFSLLRSGVIGFGETPYRRVLVHGFAL--- 597

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
            D    +M K  G+++    ++ +V  D VRF +L     E L F +  +    ++  V 
Sbjct: 598 -DEQGREMHKSLGNYVDFEELIAKVPRDVVRFWVLQNTVWEDLRFSWKGLDLMRRDFNVI 656

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           +  YA+A       +         FD    ++   E   +  +  ++  LA   R    A
Sbjct: 657 WNVYAFASIYMGLDR---------FDPRRTSLSSVEDSLEVEDRWILSRLASLKRRYLTA 707

Query: 513 TIAQEPY 519
                 +
Sbjct: 708 MEDLRIH 714


>gi|159118292|ref|XP_001709365.1| Valine-tRNA ligase [Giardia lamblia ATCC 50803]
 gi|3219290|dbj|BAA28839.1| Valyl tRNA Synthetase [Giardia intestinalis]
 gi|157437481|gb|EDO81691.1| Valine-tRNA ligase [Giardia lamblia ATCC 50803]
          Length = 1218

 Score = 40.3 bits (93), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGK------GTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +PS + K       +   +  ++           K  +     N TG +H+GH     + 
Sbjct: 62  NPSVIEKSWYEWWEAAGFFSPDMQKNIRSKDSRCKFTLLIPPPNVTGSLHIGHALTNSIQ 121

Query: 148 DTLASLMAFSGYEVTREYYINDAGA 172
           D L       GY       ++ AG 
Sbjct: 122 DALVRWYRMMGYRTLYLPGLDHAGI 146


>gi|300812080|ref|ZP_07092528.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496919|gb|EFK31993.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 660

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 106/335 (31%), Gaps = 50/335 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V  DT+       GY+       ++ G +I   A  +  +       
Sbjct: 17  PSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAEKLGMK------- 69

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-VQAMMKIIRDD 248
                P+ Y  G    +K + K+L   Y   +    EE    + K +  ++A   I   +
Sbjct: 70  -----PKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 249 LKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 ++ + + +E            +++  +A  G+  + +  P       K      
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q             R     +        DL+  +   + G        +++YV      
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----------- 396
                      D S + K   A    V ++  + + +   ++ +  D             
Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 397 ---PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                KMSK  G+ +    ++   G D VR+ ++ 
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMR 339


>gi|269958292|ref|YP_003328079.1| glutamyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848121|gb|ACZ48765.1| glutamyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 455

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 59/228 (25%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE------ 288
           + S +  ++ I++DLK L +  D+  ++            ++ ++L  +G VY       
Sbjct: 59  ERSEERYVEEIKNDLKWLAMDWDLCFNQSS----RIKRYDEVFNSLMGKGVVYPCYETQE 114

Query: 289 ------------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-------------- 322
                       G+ P          + DRK   ++       +DR              
Sbjct: 115 ELELKRKMMLKMGLPPIYDRSALNMTEQDRKAHSYKRPYFRLKMDRDQEISWNDEIRGRV 174

Query: 323 ----------PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
                      L +++GSYTY            +    ++I   G DH         +  
Sbjct: 175 VLQAKNISDPILRRTNGSYTYMLPST---VDDVDFEVTHVIR--GEDHISNTAVQVHIMD 229

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            +  +      L   L+R+       KMSKR G     +  + E+G +
Sbjct: 230 VLGVRPPSFVHL--PLLRMGES----KMSKRVGGTEICK--MREMGLE 269


>gi|218295828|ref|ZP_03496608.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243566|gb|EED10094.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 878

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        G    + + GK  K  +  +   P+G +H+GH +   +GD LA      GY
Sbjct: 12  KWQRFWKEKGFMKAKEVPGKRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGY 71

Query: 160 EV 161
           EV
Sbjct: 72  EV 73


>gi|169343242|ref|ZP_02864253.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298540|gb|EDS80621.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 514

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 112/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ I   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K               G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPAEGFEDKRVYVWIDALLAYVTASKKVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    ++ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|161528475|ref|YP_001582301.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339776|gb|ABX12863.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 462

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 63/420 (15%), Positives = 126/420 (30%), Gaps = 61/420 (14%)

Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165
           +   +      +    KV I           H+GH R  +V D L   +   G E+    
Sbjct: 3   LQDTLSNAEQELDTSKKVKIYLCGVTVYDESHIGHARTIIVFDVLRRYLEDKGIEIEFIQ 62

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
              D   +I   A +          N  ++     Y   Y K          ++      
Sbjct: 63  NFTDVDDKIINRAQA---------ENTSAEAISTKYIENYFKDFDGLNVKHATNYPK--- 110

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
                      + + +  II+             + E +      + +   +      G 
Sbjct: 111 -----------ATEHIEDIIK---------FIEKLIEKEIAYVSKNGVYFAVSKFPEYGK 150

Query: 286 VYEGILPPPKSKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
           + +  +   +S    + D  +       +++ + V    D P  K  G   +     A  
Sbjct: 151 LSKKKIDELESGARIEVDEAKNNPLDFAVWKFSDVEPLWDSPWGK--GRPGWHIECSAMS 208

Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  FD    + G          E  +A + S    Q   +   +  +  DG   KM
Sbjct: 209 TKYLGENFD----IHGGGRDLIFPHHENEIAQSESFTGNQFAKIWMHVGMVTIDGE--KM 262

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ----SKENPVFYVQY 456
           SK  G+  +++HV++  G + +R   L    S+ +D+    +KE      +    +Y   
Sbjct: 263 SKSIGNIKSIKHVLENWGPNIIRLFCLSGHYSKPIDYSEELLKENLTKWRQAETCYYELI 322

Query: 457 AYA------------RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504
                          +  S F +A +   +    L     + +E+    +E +L    A+
Sbjct: 323 HANSENSEKVGSIVEKLGSEFDKALEDDVNTHLALSAFFQLVKEANRLAAEEKLGKEDAK 382


>gi|124028274|ref|YP_001013594.1| isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978968|gb|ABM81249.1| Isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 989

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 358 SDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           +D   G+   L        E+K    VLL   V    D    KMSK  G+ I     +++
Sbjct: 566 ADQTRGWFYTLLVTGVVWHERKPYREVLLQGHV---LDKYGKKMSKSKGNVIWALEWMEK 622

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVK 443
            G+D +R  +L R   + ++FD  +V+
Sbjct: 623 NGTDPMRIFLLSRAPWDSINFDPDEVR 649



 Score = 36.8 bits (84), Expect = 9.3,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 59/204 (28%), Gaps = 39/204 (19%)

Query: 96  SYLRKILSSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++ K      +    +      GKG             G MHVGH R   + D     M
Sbjct: 17  EWVLKFWDENKIYEKAKKKSWEEGKGPVFAFLEGPPTTNGFMHVGHARGRTLKDVKLRYM 76

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY V           Q         W  Q      + +   G      ++ +G E  
Sbjct: 77  RMRGYRVW---------DQAG-------WDTQGLPVELEVEKKLGLKSKRDIEKLGVERF 120

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            +   +L+++  E W+   K                 L +  D    E  +    P  I 
Sbjct: 121 VEECRKLVDYYMEHWVRASK----------------RLGLWLDY---EHAYETRHPRYIE 161

Query: 275 DI---IDNLARQGYVYEGILPPPK 295
            +   I     +G +YEG    P+
Sbjct: 162 QVWSFIKKAHEKGLLYEGRRVVPR 185


>gi|104773496|ref|YP_618476.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103422577|emb|CAI97180.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125127|gb|ADY84457.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 660

 Score = 40.3 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 106/335 (31%), Gaps = 50/335 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    +  DT+       GY+       ++ G +I   A  +  +       
Sbjct: 17  PSGRLTIGNAYTTIAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAEKLGMK------- 69

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-VQAMMKIIRDD 248
                P+ Y  G    +K + K+L   Y   +    EE    + K +  ++A   I   +
Sbjct: 70  -----PKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 249 LKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 ++ + + +E            +++  +A  G+  + +  P       K      
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q             R     +        DL+  +   + G        +++YV      
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----------- 396
                      D S + K   A    V ++  + + +   ++ +  D             
Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 397 ---PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                KMSK  G+ +    ++   G D VR+ ++ 
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMR 339


>gi|300726226|ref|ZP_07059679.1| glutamate--tRNA ligase [Prevotella bryantii B14]
 gi|299776423|gb|EFI72980.1| glutamate--tRNA ligase [Prevotella bryantii B14]
          Length = 505

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 99/294 (33%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G  V R   I D  +     
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFAR--QHGGELVFR---IEDTDSHRFVP 54

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +++    ++        Y  G Y +   +++  KY  +LL+          
Sbjct: 55  GAEEYIIESFKWLGIKFDEGVSFGGNY--GPYRQSERRDIYKKYVKQLLDNG-----KAY 107

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             +     +   R+ +     Q+D         R   +  ++ ++ L   G  Y      
Sbjct: 108 YAFDTPEELNAKREAVSNF--QYDAHT--RMEMRNSLALPKEEVEKLLADGAQYTVRFKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     DM R  +  +S ++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPGEEVHVNDMIRGDVCIKSDILD---DKVLYKSADELPTYH---LANIVDDHLMEITHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYKAFGWEDTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|256832195|ref|YP_003160922.1| tRNA synthetase valyl/leucyl anticodon-binding [Jonesia
           denitrificans DSM 20603]
 gi|256685726|gb|ACV08619.1| tRNA synthetase valyl/leucyl anticodon-binding [Jonesia
           denitrificans DSM 20603]
          Length = 901

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 29/156 (18%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   ++++ GSD+VR+     +      F+  ++K   +      
Sbjct: 602 DPDRKKMSKSKGNVVTPMGLLEQHGSDAVRYWAASARLGTDAAFEVGQMKIGRR------ 655

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                     I   +K      D      +        D +       L     V++ AT
Sbjct: 656 ------LAIKILNASKFALSFSDDGHISLDPAHVSEPLDKA------MLGALAEVVDRAT 703

Query: 514 IAQEPYKLAFY----LYDLASVFHGHWSHGRENPRL 545
            A        Y      +L   F   W+   +   L
Sbjct: 704 EALN-----SYDHTRALELTETF--FWTFCDDYLEL 732


>gi|167723126|ref|ZP_02406362.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 318

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  +   
Sbjct: 20  PQALEPRWQSAWRDARLFDADPQPGRPKWFIVELPPFATGQLHMGHARNYVLADADSRFR 79

Query: 155 AFSGYEV 161
              GY V
Sbjct: 80  RMQGYNV 86


>gi|117924251|ref|YP_864868.1| glutamyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|187470996|sp|A0L669|SYE_MAGSM RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|117608007|gb|ABK43462.1| glutamyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 472

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D  LL+SDGS TY   +LA     ++    ++I   G DH+    R   +  A+      
Sbjct: 166 DLILLRSDGSPTY---NLAVVVDDHDMEITHVIR--GEDHTSNTPRQIHLFQALGWD--- 217

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDF 407
             V     + L       K+SKR G  
Sbjct: 218 --VPSYAHIPLLHGEDGSKLSKRHGAV 242


>gi|94987050|ref|YP_594983.1| cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082155|sp|Q1MQR5|SYC_LAWIP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94731299|emb|CAJ54662.1| Cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 485

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 4/100 (4%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWRYQQALYNN 192
           H+GH R A+V D L  L+ + GY+VT      D   +I    N    S     ++ +   
Sbjct: 36  HIGHARSAIVFDILVRLLRYQGYDVTFIRNFTDIDDKIINRANKEGRSSKEVAEEFINAF 95

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232
             D+         ++    +   +         E     I
Sbjct: 96  HEDMDRLGVLNADIEPKATDYIPEMIECCQKLLEADKAYI 135


>gi|81429045|ref|YP_396045.1| leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769672|sp|Q38VP5|SYL_LACSS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78610687|emb|CAI55738.1| Leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 807

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 345 YERGFDNM---IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +++  D +   +Y+ G++H+     YV+        +     +          +      
Sbjct: 514 FDKLKDWLPVDMYIGGAEHAVLHLLYVRFWHKFLYDIGVVPTKEPFQHLYNQGMILGDNH 573

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVR 423
            KMSK  G+ +    VVD  G+D++R
Sbjct: 574 EKMSKSKGNVVNPDDVVDRFGADTLR 599


>gi|61657385|emb|CAI44301.1| leucyl-tRNA synthetase [Thermotoga petrophila]
          Length = 843

 Score = 40.3 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 25  PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 84

Query: 155 AFSGYEV 161
              GY V
Sbjct: 85  RMRGYNV 91


>gi|325989668|ref|YP_004249367.1| isoleucyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574753|emb|CBZ40409.1| Isoleucyl-tRNA synthetase [Mycoplasma suis]
          Length = 911

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 34/250 (13%)

Query: 339 AYFKCKYERG--FDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
           A+F  K + G  + + +YV G D   G+      ++     K    +++    V    D 
Sbjct: 534 AFFLNKDKEGNVYPSDVYVEGGDQLRGWFNSSSILSLLTLGKLPFKSLVAHGFV---LDE 590

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ I    +V + G+D  R  +      + + F   ++           VQ
Sbjct: 591 KGHKMSKSKGNVIDPLEMVSKYGADIFRLWIGNSNYLKDMKFSESQMNS---------VQ 641

Query: 456 YAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
             Y + R+I  + +  +    D++    N    E EF   E + I  L  +   I  +  
Sbjct: 642 LQYRKIRNILFKFSLSVLGKFDWE----NTKLVELEFHYPENKYIYSL--FLETI--SFA 693

Query: 515 AQEPYKLAFY-----LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
            +E     FY     L D   ++   +      P L    +++   +     ++  ++ +
Sbjct: 694 ERELNLFNFYKVIKKLMDFTDLYSSWY-LEIVKPILYSRDSDDTYKSE----VISVISRV 748

Query: 570 INSGLNIIGV 579
           +   L I+ +
Sbjct: 749 LKYSLLILSI 758


>gi|294791905|ref|ZP_06757053.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457135|gb|EFG25497.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 822

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +         K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMK 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|260663453|ref|ZP_05864343.1| leucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260551994|gb|EEX25047.1| leucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 805

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 527 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 586

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 587 NPDDIVDQYGADTLR 601


>gi|300022772|ref|YP_003755383.1| valyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524593|gb|ADJ23062.1| valyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 939

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 12/103 (11%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     ++    +V +  LV   RD    KMSK  G+
Sbjct: 541 TGFD-IIFFW-------VARMMMMGLHFMDEVPFKDVYIHALV---RDERGQKMSKSKGN 589

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +    ++DE G+D++RF  L    ++  D    K + +   N
Sbjct: 590 VMDPLVLIDEFGADALRFT-LAAMAAQGRDIKLAKSRVEGYRN 631


>gi|184155830|ref|YP_001844170.1| leucyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238692988|sp|B2GDF8|SYL_LACF3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|183227174|dbj|BAG27690.1| leucyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 805

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 527 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 586

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 587 NPDDIVDQYGADTLR 601


>gi|114326669|ref|YP_743826.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122328346|sp|Q0BW99|SYL_GRABC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114314843|gb|ABI60903.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 875

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           + S     ++  +             G  T   +E     P+G +H+GH R   +GD +A
Sbjct: 20  FASAERRWQLAWTERACFTVPDVPDPGARTYYVLEMF-PYPSGQIHMGHVRNYTLGDVVA 78

Query: 152 SLMAFSGYEV 161
                 GY+V
Sbjct: 79  RYKRAQGYQV 88


>gi|46446128|ref|YP_007493.1| isoleucyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627502|sp|Q6MDY1|SYI_PARUW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46399769|emb|CAF23218.1| putative isoleucyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 1038

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  ++AA+ ++ A  NV++  L+ L  +G   KMSKR  ++     V+ 
Sbjct: 551 GLDQTRGWFYTLTVLSAALFDQPAMKNVIVNGLI-LAENGA--KMSKRLKNYPDPAEVIQ 607

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCK 441
           + G+D++R  ML     +  D  F K
Sbjct: 608 QYGADAIRLYMLHSPAVKADDLSFSK 633


>gi|42518493|ref|NP_964423.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|61216256|sp|Q74L26|SYC_LACJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41582778|gb|AAS08389.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 470

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 98/321 (30%), Gaps = 33/321 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V    Y+++     + +         +
Sbjct: 27  CGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV---NYVSNFTDVDDKMI-----NEAR 78

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             +     L E Y            +        L+      +  + D+    + K +  
Sbjct: 79  KEHTTVEKLAERYIKAFMEDTEALNIE----PATLHPRATHEIKEIIDFVQDLIDKGV-- 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A  +  D++     F           I  L       E I    +SK     D    
Sbjct: 133 ---AYEVDGDVYYRARKFPNYG-QLSDQNIAELEEG--ASEHINEEEQSKKEDPIDF--- 183

Query: 308 QLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L  ++    D++  D P  K    +      +       +   D  I + G        
Sbjct: 184 ALW-KAQKEEDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFP 236

Query: 366 RLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             E  +A + ++   +          +       KMSK   +F+T+  ++ ++    +RF
Sbjct: 237 HHENEIAQSEAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQVLRF 296

Query: 425 MMLWRKNSELLDFDFCKVKEQ 445
            M   +    +++    +K+ 
Sbjct: 297 YMSSVQYRRPINYSEDGLKQA 317


>gi|116513491|ref|YP_812397.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116092806|gb|ABJ57959.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 660

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 106/335 (31%), Gaps = 50/335 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V  DT+       GY+       ++ G +I   A  +  +       
Sbjct: 17  PSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAEKLGMK------- 69

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-VQAMMKIIRDD 248
                P+ Y  G    +K + K+L   Y   +    EE    + K +  ++A   I   +
Sbjct: 70  -----PKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 249 LKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 ++ + + +E            +++  +A  G+  + +  P       K      
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM----- 356
           Q             R     +        DL+  +   + G        +++YV      
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 357 ---------GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----------- 396
                      D S + K   A    V ++  + + +   ++ +  D             
Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 397 ---PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                KMSK  G+ +    ++   G D VR+ ++ 
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMR 339


>gi|308048542|ref|YP_003912108.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630732|gb|ADN75034.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 859

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPAQIESQVQKHWDDNQTFVAKEDPSKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|294793765|ref|ZP_06758902.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455335|gb|EFG23707.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 822

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +         K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMK 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|251796200|ref|YP_003010931.1| leucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543826|gb|ACT00845.1| leucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 811

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ G++H+     Y +    V   +   + K   + L+ + + L  +    KMSK  G+
Sbjct: 531 LYIGGAEHAVLHLLYARFWHKVLYDLGVVDTKEPFHKLVNQGMILGTN--NEKMSKSRGN 588

Query: 407 FITLRHVVDEVGSDSVR 423
            I    +V+E G+D++R
Sbjct: 589 VINPDDIVNEFGADTLR 605


>gi|183220089|ref|YP_001838085.1| glutamyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189910209|ref|YP_001961764.1| glutamyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687805|sp|B0SKQ2|SYE_LEPBP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|238687835|sp|B0SCM4|SYE_LEPBA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|167774885|gb|ABZ93186.1| Bifunctional glutamate--tRNA ligase/glutamine-- tRNA ligase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778511|gb|ABZ96809.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase; GluRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 517

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 93/296 (31%), Gaps = 49/296 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +P+G +HVG  R A+          G  L  +   +  + + E       A    +  
Sbjct: 9   APSPSGFLHVGGARTALFNYLYAKAKKGKFLLRI-EDTDQDRSTE-------ASFKIILE 60

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W   +         P G Y      H+ KE  DK   E             + +   
Sbjct: 61  SLKWLGMEWDEGPGVGGPNGPYTQSERIHIYKEYTDKLIQE---------KKAYRCFCTA 111

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  +    A+ I +       D    +          L ++  +   +      K  
Sbjct: 112 EELEGKKKQADAMGIPYIYDGKCSDLSDAEIGS------QLEKK--IPFTVRFKTPHKIV 163

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              DM + ++ F S ++GD +   ++KSDG  +Y   + A           ++I   G  
Sbjct: 164 IVDDMIQGKVKFESKLIGDFI---IVKSDGFPSY---NYAVVIDDALMKITHVIR--GVG 215

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV 413
           H     R   +  A      +                  K+SKRAG    +  R +
Sbjct: 216 HLSNTPRQILIFEAFGFPLPRFAH-----ASEIVGTDGKKLSKRAGATSVLAFRDL 266


>gi|121591023|ref|ZP_01678340.1| leucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121547133|gb|EAX57265.1| leucyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 42  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 101

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 102 QRLQGKNV 109


>gi|315641872|ref|ZP_07896864.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482440|gb|EFU72980.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 807

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 11/106 (10%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  YF   +     K    +  +       IY+ G++H+     Y +        +   
Sbjct: 498 GSSWYFLRYIDPHNKKALADYGKLTRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVV 557

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +          +   G   KMSK  G+ +    VV + G+D++R
Sbjct: 558 PTKEPFQKLFNQGMILGGNNEKMSKSRGNVVNPDDVVTQYGADTLR 603


>gi|291458663|ref|ZP_06598053.1| glutamate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419196|gb|EFE92915.1| glutamate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 468

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 103/284 (36%), Gaps = 34/284 (11%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNND 193
           MHVG+ R A+    +A      G +        D G ++      +          ++  
Sbjct: 1   MHVGNLRTALYAYLIA---KHEGGDFLLRIEDTDQGREVEGAVEIIRRTLIDTGLFWDEG 57

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
            D P    P V  + V   +  KY+ ELL   E  +        ++ +  ++  +     
Sbjct: 58  PDKPGDCGPYVQSERVKAGIYRKYAEELLEKGE-AYYCFCTKERLEGLKTVVNGEEILHY 116

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            +H + +S ++      S I  +I                P+S  T   D     +   +
Sbjct: 117 DKHCLSLSPEEVQEKLVSGIPYVIRQ------------NNPRSGKTVFHDELYGDVEVEN 164

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDHSGYVKRLEAVAA 372
           + +    D  L+KSDG  TY  A++       +     + +V+ G+++     +   +  
Sbjct: 165 SELD---DMVLIKSDGFPTYNFANV------VDDHLMRISHVVRGNEYLSSSPKYNRLYE 215

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           A   +  +   + C L+    D    K+SKR+G   +   ++++
Sbjct: 216 AFGWEVPK--YVHCPLIT---DEEHRKLSKRSGHS-SFEDLIEQ 253


>gi|259502818|ref|ZP_05745720.1| leucine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169185|gb|EEW53680.1| leucine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 845

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 567 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 626

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 627 NPDDIVDKYGADTLR 641


>gi|238019263|ref|ZP_04599689.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
 gi|237863962|gb|EEP65252.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
          Length = 822

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +         K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMK 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|227515576|ref|ZP_03945625.1| leucine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086006|gb|EEI21318.1| leucine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|299783451|gb|ADJ41449.1| Leucine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 805

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 527 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 586

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 587 NPDDIVDQYGADTLR 601


>gi|227824324|ref|ZP_03989156.1| glutamyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904823|gb|EEH90741.1| glutamyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 488

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 92/289 (31%), Gaps = 40/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R     D+ +QI     S+ 
Sbjct: 10  APSPTGYLHIGGARTALFNWLFARSQGGKLVLRIEDTDQDRLK--EDSVSQI---ITSLK 64

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         +   P     G Y +    ++  KY  +L++  +  +      +     +
Sbjct: 65  WLGLSWDEGPEVGGP----VGPYFQSERFDIYRKYCQQLIDEGKAYYC-----FCSAEDL 115

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
              R+  +AL            + R       +        G  Y   +  P   T    
Sbjct: 116 AEQREKQRALKQPFH-------YARTCRDIPPEEAKKRVENGESYSVRIKVPLEGTIGFH 168

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM    + F      D     ++KS G  TY   + A     +  G  +++     +H  
Sbjct: 169 DMIHGDIQFDVNQYDDF---VIMKSSGIPTY---NFAVVVDDHLMGMTHVLR--AEEHVS 220

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A+  +  Q   +    + L  D    K+SKR G      
Sbjct: 221 NTPKQLFIYQALGWEAPQFGHM---PMILAPD--RSKLSKRHGATSVEE 264


>gi|147673619|ref|YP_001216429.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|146315502|gb|ABQ20041.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012773|gb|ACP08983.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 42  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 101

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 102 QRLQGKNV 109


>gi|15640972|ref|NP_230603.1| leucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153823306|ref|ZP_01975973.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081130|ref|YP_002809681.1| leucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254285626|ref|ZP_04960590.1| leucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254848087|ref|ZP_05237437.1| leucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297581335|ref|ZP_06943259.1| leucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298498928|ref|ZP_07008735.1| leucyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655415|gb|AAF94118.1| leucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126519170|gb|EAZ76393.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|150424488|gb|EDN16425.1| leucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227009018|gb|ACP05230.1| leucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254843792|gb|EET22206.1| leucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297534651|gb|EFH73488.1| leucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297543261|gb|EFH79311.1| leucyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 42  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 101

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 102 QRLQGKNV 109


>gi|83943971|ref|ZP_00956428.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845218|gb|EAP83098.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 971

 Score = 40.3 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 19/222 (8%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           + L      G+              +        G +H+GH     + D +       G+
Sbjct: 34  EWLERWEKIGVYDRLREKQGRKPFTLHDGPPYANGNLHIGHALNKTIKDMIVRSHQMMGF 93

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +     YI         +   +  +Y+Q   + D D+P   +     K     +      
Sbjct: 94  DAR---YIPGWDCHGLPIEWKIEEQYRQKGRDKD-DVPINDFRAECRKFAAGWV------ 143

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +   E K L I  +++   +      + + +  +   F+     ++G    +   ++ 
Sbjct: 144 -DVQREEFKRLGITGNWADPYLTMDFHAE-RVIAEEFMKFLMNGTLYQGSKPVMWSPVEK 201

Query: 280 --LARQGYVYEG-----ILPPPKSKTTQKCDMDRKQLLFRST 314
             LA     Y       I    K   T    +D   ++  +T
Sbjct: 202 TALAEAEVEYHDKESFTIWVKFKVVGTDDATLDGAHVVIWTT 243


>gi|314936645|ref|ZP_07843992.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655264|gb|EFS19009.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 916

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 96/309 (31%), Gaps = 57/309 (18%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRG 268
           K   ++L+  EE    +  D+    +  +IRD  +          +   +F +E+     
Sbjct: 418 KVRQDILDAIEETDFKV--DWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIM 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               +  + D     G            + EG   P         + D   + F S    
Sbjct: 476 TKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGS-- 533

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
               R +L++                + E  F   +Y  GSD   G+       A A   
Sbjct: 534 --SHRGVLET----------------RPELHFPADLYFEGSDQYRGWFNSSITTAVATRG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     +L    V    DG   KMSK  G+ I    VV + G+D  R  +        + 
Sbjct: 576 QAPYKFLLSHGFVM---DGEGKKMSKSLGNVIVPNQVVKQKGADIARLWVSSTDYLADVR 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++ +Q+ +         Y + R+  R       D +    P      E E    + 
Sbjct: 633 IS-DEILKQTSD--------VYRKIRNTLRFMLGNINDFN----PETDSVPEHELLEVDR 679

Query: 497 QLIVHLAEY 505
            L+  L E+
Sbjct: 680 YLLNRLREF 688


>gi|237743224|ref|ZP_04573705.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433520|gb|EEO43732.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 712

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A +      +VL    V    DG   KMSK  G+ ++  
Sbjct: 562 LYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVN---DGEGRKMSKSLGNTVSPA 618

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R         + +      +K+ S+         AY R R+  R    +
Sbjct: 619 DVIKVYGADILRLWCGSVDYRDDVRISDNILKQMSE---------AYRRIRNTAR--YIL 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               DF+    + +P +   +  +  L   L    R +  +    E
Sbjct: 668 GNSYDFN-PKTDKVPYKDMLEIDKWAL-NKLEVLKRSVTESYDKYE 711


>gi|229523252|ref|ZP_04412659.1| leucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339615|gb|EEO04630.1| leucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 878

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 26  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 85

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 86  QRLQGKNV 93


>gi|183598265|ref|ZP_02959758.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
 gi|188020435|gb|EDU58475.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
          Length = 675

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A +     +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFSDMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRDAPYFGFEIPDAPGKYFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNLCDKRGNINFDEFWNKDSKTDLYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K     +      +  +G   KMSK  G FIT R  +
Sbjct: 301 -----HSLF---WPAMLEGSGYRKPTNLFVHGY---VTVNGA--KMSKSRGTFITARSYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D + +D +R+    + +S + D D        + N
Sbjct: 348 DHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVN 382


>gi|154151808|ref|YP_001405426.1| isoleucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166229748|sp|A7IAM2|SYI_METB6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154000360|gb|ABS56783.1| isoleucyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 1076

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 66/187 (35%), Gaps = 16/187 (8%)

Query: 357 GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D   G+   +L A   A  +   +   +    +    D    KMSK  G+ +    V+
Sbjct: 551 GQDQTRGWFYSQLGASTIAFGKAPYKSVCMHGFAL----DAEGRKMSKSLGNVVAPEEVI 606

Query: 415 DEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
            +VG D +R  +L      + L F++  +   ++   + +  Y +     I  + +    
Sbjct: 607 AKVGVDVLRLYVLSSSAPWDDLKFNWDGIATVNRTMNILWNVYRFPMPYMILDRFEPEAK 666

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK----LAFYLYDLA 529
              +D     V     E    +  ++  +     +++ +T   + ++    +  ++ +  
Sbjct: 667 SGHWD--GSFVRSHIRELPDEDRWIVSRINTVAGIVDASTKECQLHRATREILNFILE-- 722

Query: 530 SVFHGHW 536
                 +
Sbjct: 723 -DLSRWY 728


>gi|156096861|ref|XP_001614464.1| cysteine -tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803338|gb|EDL44737.1| cysteine -tRNA ligase, putative [Plasmodium vivax]
          Length = 686

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 56/317 (17%), Positives = 112/317 (35%), Gaps = 51/317 (16%)

Query: 137 HVGHCRCAVVGDTLASLM-AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           H+GH R  V  D +  ++  +  Y+V     I D   +I   +      + +     + +
Sbjct: 150 HLGHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSEEEKVSFTELARKWECE 209

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKA 251
             E       L         +Y  +++++ E+    K+  + ++ SV   +   +   K 
Sbjct: 210 FWEDMKKLNVLLPTAITRVSEYVDQIIHYIEKIIDNKYAYVSEEGSVYFDIDEFKKSPKH 269

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
                        + R +P  ++D    L  +G +  G++   K             L  
Sbjct: 270 F------------YARMEPLSVKDETKILEGEGDL--GVISKKKKNAYDF------ALWK 309

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS--D-HSG------ 362
            S       D P  K    +    + +A               ++GS  D HSG      
Sbjct: 310 SSKPNEPYWDSPWGKGRPGWHIECSTMAS-------------NILGSVLDIHSGGVDLRF 356

Query: 363 -YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
            +     A + A  +    +N  L     L+ +G  +KMSK   +FIT++H++ E   + 
Sbjct: 357 PHHDNELAQSEAFFDASQWVNYFLHSG-HLHIEG--LKMSKSLKNFITIKHMLSEYTPNQ 413

Query: 422 VRFMMLWRKNSELLDFD 438
           +R + L  K    +++ 
Sbjct: 414 IRILFLLNKWDSFMNYS 430


>gi|291544503|emb|CBL17612.1| valyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 873

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 33/196 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP      + +  +    +   +        I     N TG +H+GH     + D L   
Sbjct: 10  SPKDFEDKIYAYWMDNHCFHAEVDRTKNPYTIVIPPPNITGQLHMGHALDETLQDILIRY 69

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               GY               +  +++   +  +A+        +    G   +      
Sbjct: 70  RRMQGYCTL-------WLPGTDHASIATEAKIVEAMRKEGITKDDIGRDGFLKR--AWAW 120

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++Y                           I + LK L    D          G    +
Sbjct: 121 KEQYGGR------------------------IVEQLKKLGSSCDWERERFTMDEGCNRAV 156

Query: 274 RDIIDNLARQGYVYEG 289
           R++      +G +Y G
Sbjct: 157 REVFVRYYEEGLIYRG 172


>gi|228470963|ref|ZP_04055808.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
 gi|228307360|gb|EEK16374.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
          Length = 1137

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +++       +L   + L +DG   KMSKR G+ +    V+ 
Sbjct: 650 GVDQTRGWFFTLHAIA-TMTQGSIAFRNVLVNGLVLDKDG--NKMSKRLGNAVDPFGVIQ 706

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   N  E + FD   V+E S++
Sbjct: 707 QYGSDPLRWYMITNANPWENIRFDPKGVEEVSRK 740


>gi|289207999|ref|YP_003460065.1| glutamyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943630|gb|ADC71329.1| glutamyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 468

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 88/280 (31%), Gaps = 44/280 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQ 187
           + +PTG +H+G  R A+     A             ++  +   +I    L         
Sbjct: 8   APSPTGYLHIGGARTALFSWLYAR------------HHGGEFVLRIEDTDLERSTAESVN 55

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
           A+    + L   Y  G + +    +   +   +L+      +        + AM +  + 
Sbjct: 56  AILEGMNWLGLTYDHGPFYQTERFDRYKEVIDQLMATG-HAYRCYCTKEELDAMREEQKA 114

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                  +   +             +  +I                P    T   DM R 
Sbjct: 115 -----RKEKPRYDGRCRTRTEPREGVEPVI------------RFRTPDEGVTVVDDMVRG 157

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++ F++  +    D  + +SDGS TY    +       + G  ++  V G DH     R 
Sbjct: 158 KVAFQNRELD---DLIIARSDGSPTYNLTVV---VDDMDMGITHV--VRGDDHLNNTPRQ 209

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+  +  +   L   +     DG   K+SKR G  
Sbjct: 210 INILKALGVEPPRYGHLPMIM---GPDGA--KLSKRHGAV 244


>gi|239917504|ref|YP_002957062.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414006|ref|ZP_06245748.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838711|gb|ACS30508.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 33/192 (17%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +    ++D+ GSD+VR+     +      ++  ++K   +      
Sbjct: 599 DPDRKKMSKSKGNVVVPTDILDQFGSDAVRYWAASARLGADTAYEVAQMKIGRR------ 652

Query: 454 VQYAYARCRSIFRQAKDIFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
                     +   AK +       D   R      +  +  +  L+  LA     +E A
Sbjct: 653 ------LAIKLLNAAKFVLNLGATQDAVIRTADDAAAVTNPLDASLLARLA---ATVEQA 703

Query: 513 TIAQEPYKLAFYLYDLASVFH-------GHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           T A E        YD A   +              E  + R    +          +V  
Sbjct: 704 TRAFE-------AYDYARALNVTEQFFWAFTDDYVELVKDRAYGGHGEAEQAS---VVTT 753

Query: 566 VASIINSGLNII 577
           +A+ +++ L ++
Sbjct: 754 LATTLDALLRLL 765


>gi|170288577|ref|YP_001738815.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176080|gb|ACB09132.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 824

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 6   PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 65

Query: 155 AFSGYEV 161
              GY V
Sbjct: 66  RMRGYNV 72


>gi|15642942|ref|NP_227983.1| leucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919980|sp|Q9WY15|SYL_THEMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4980663|gb|AAD35261.1|AE001702_1 leucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 824

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 6   PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 65

Query: 155 AFSGYEV 161
              GY V
Sbjct: 66  RMRGYNV 72


>gi|20094422|ref|NP_614269.1| lysyl-tRNA synthetase (class I) [Methanopyrus kandleri AV19]
 gi|27805740|sp|Q8TWP6|SYK_METKA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19887506|gb|AAM02199.1| Lysyl-tRNA synthetase (class I) [Methanopyrus kandleri AV19]
          Length = 555

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 18/144 (12%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E+ R    +     +    A+ +G +HVG+ R  +  D +A ++    +E  R  +I+D 
Sbjct: 16  EHCRKHADELPDEIVVASGASTSGRLHVGNARDVLTADAVARVLRERYHEDVRVVWISD- 74

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL------KHVGKELADKYSSELLNF 224
              ++ L        ++   + D  L E Y    Y       +      A  +  EL  F
Sbjct: 75  --DVDPL--------RRIPRDLDGRLSEDYLGVPYKAIPVGDEPYSDRWARNFVEELREF 124

Query: 225 PEE-KWLPIVKDYSVQAMMKIIRD 247
             E +W+   + Y+    +K++R+
Sbjct: 125 GAEVEWISSAELYTDNGFVKLVRE 148


>gi|83949881|ref|ZP_00958614.1| leucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837780|gb|EAP77076.1| leucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 860

 Score = 40.3 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  S+   +G+        +     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 10  AKWQSAWDEAGLFRATRSEDRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKIATG 68

Query: 159 YEV 161
           + V
Sbjct: 69  HNV 71


>gi|328869564|gb|EGG17942.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1082

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 88/265 (33%), Gaps = 46/265 (17%)

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-----IFISEDDFHRGDPSPIRD 275
           L N  +  W+P        A       D      ++      I+ISED         I +
Sbjct: 449 LKNNEDTHWVPDFVKEKRFANWLKNASDWAVSRNRYWGTPIPIWISEDGQEMVVIGSIEE 508

Query: 276 IID-------NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           + +       +L R+  +    +P  K     +   +     F S  +            
Sbjct: 509 LFELSGVRVTDLHRES-IDHITIPSKKGGAPLRRIEEVFDCWFESGSMPY---------- 557

Query: 329 GSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVL 384
               Y   +    K ++E+ F  + I    ++     +        +S     K     L
Sbjct: 558 AQQHYPFEN----KDRFEKIFPAHFI----AEGIDQTRGWFYTLLVLSTALFDKPPFQNL 609

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSELLDFDFCKV 442
           +   + L  DG   KMSKR  ++     V+D+ GSD++R  ++      +E L F    V
Sbjct: 610 IVNGLVLASDGK--KMSKRLKNYPDPVTVIDKFGSDALRLYLISSPVVRAETLKFQENGV 667

Query: 443 KEQSKE-------NPVFYVQYAYAR 460
           K+  K+          F VQ A+  
Sbjct: 668 KDMLKDVFLPWFNAYRFMVQNAHRH 692


>gi|313837330|gb|EFS75044.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927996|gb|EFS91827.1| leucyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971714|gb|EFT15812.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907122|gb|EGG26888.1| leucine--tRNA ligase [Propionibacterium sp. P08]
          Length = 826

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
             +  ++  S        +     G   +  +  + A P+G +H+GH     +GD LA  
Sbjct: 12  DAAAAQEKWSKYWEEHRTFAALDDGSKERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARY 71

Query: 154 MAFSGYEV 161
               G++V
Sbjct: 72  WRLRGFDV 79


>gi|315122642|ref|YP_004063131.1| valyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496044|gb|ADR52643.1| valyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 945

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +++   +     +  +       SE K      +  +  L RD    KMSK  G+
Sbjct: 544 TGFD-ILFFWIAR----MMMMGLHFMKDSENKGIEPFRIVYMHALVRDKYGQKMSKSKGN 598

Query: 407 FITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCKV 442
            +    ++++ G+D++RF   +       +  D  +V
Sbjct: 599 VVDPIDLINQYGADALRFYFSIMAVQGRDIKLDLARV 635


>gi|313678270|ref|YP_004056010.1| valine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950415|gb|ADR25010.1| valine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 829

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 54/201 (26%), Gaps = 35/201 (17%)

Query: 93  LSPSYLRKILSSIVVSGI---EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           +  +Y  +     +       ++           ++     N TG +H+GH     + DT
Sbjct: 4   IDKTYAPQNFEKAISKKWIDKKFFSQHDLAKKPFSLLLPPPNVTGVLHIGHALDQYIQDT 63

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           +       GY+      ++ AG    +   SV  + +                       
Sbjct: 64  ILRYKKLEGYDTFYIAGMDHAGIATQSKVESVLLQTE----------------------- 100

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269
                        N   EK++  V  +  +      R+    L I  D         +  
Sbjct: 101 --------GLSRHNLGREKFIEKVWKWK-ETYANKFREQWLTLGIGLDYERERFTLDKLS 151

Query: 270 PSPIRDIIDNLARQGYVYEGI 290
              +  +   L  +G +Y   
Sbjct: 152 NDAVNKVFIELYNKGLIYRDT 172


>gi|306831942|ref|ZP_07465097.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425868|gb|EFM28985.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 667

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 107/350 (30%), Gaps = 78/350 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       +EV     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  E+L    +K++    DY  + +  +    L  
Sbjct: 66  -------GITPQAYVDGMAADVKKLW--EMLEISYDKFIRTTDDYHEKVVADVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLA------YFKCKYERG 348
              R     D            ++ DG               DLA       +  K    
Sbjct: 171 YFLRLGKYADRLVEFFHTHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSN 230

Query: 349 FDNMIYVM-----------GSDHSGY-----VKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             +++YV            G     +           V   V +   + + +   ++ + 
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMM 290

Query: 393 RDGM--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 LDMKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 340


>gi|229525566|ref|ZP_04414971.1| leucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339147|gb|EEO04164.1| leucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 878

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 26  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 85

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 86  QRLQGKNV 93


>gi|239814307|ref|YP_002943217.1| valyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239800884|gb|ACS17951.1| valyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 959

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 83/285 (29%), Gaps = 40/285 (14%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
              +G    +          I+    N TG +H+GH     + D+LA      G      
Sbjct: 38  YAKAGFRGTQAPKEGADSFAIQLPPPNVTGTLHMGHAFNQTIMDSLARYHRMKGDNTLWV 97

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
              + AG  I T  +      +Q +  +D                  E  +K  + +   
Sbjct: 98  PGTDHAG--IATQIVVERQLQEQKISRHD-------LGRKNFVARVWEWKEKSGNTITEQ 148

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HR----GDPSPIRDI--- 276
                  +  D+S +     + +DL  +  Q  + + E+   +R    G+  P+      
Sbjct: 149 MRRMGDTV--DWSREYF--TMDEDLSKVVTQTFVSLYEEGLIYRGKRLGNWDPVLKTSVS 204

Query: 277 ---IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLLKSDG 329
              +++    G ++    P      T      R + +   T V     D+  RPL+    
Sbjct: 205 DLEVESEEEDGSLWHIAYPLADGSGTLTVATTRPETMLGDTAVMVHPEDERYRPLIGKQV 264

Query: 330 SY------------TYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
                          Y   +      K     D   Y +G  H  
Sbjct: 265 RLPLVDRLIPIIADDYVDKEFGTGVVKVTPAHDYNDYAVGQRHKL 309


>gi|183179693|ref|ZP_02957904.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|183013104|gb|EDT88404.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 42  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 101

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 102 QRLQGKNV 109


>gi|150395637|ref|YP_001326104.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027152|gb|ABR59269.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 969

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 35/274 (12%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSY 331
            +     V   IL   + +       +  +  F              D+      S  ++
Sbjct: 524 EILADDEVNSRILDAFEKEGADAWFAEGAKERFLGKDHDHTRWHQVMDILDVWFDSGSTH 583

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           T+   D      + +  +   +Y+ GSD   G+       + A   +     V+      
Sbjct: 584 TFTLED------RPDLKWPADVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVITHGFTM 637

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              D    KMSK  G+ +T + V+ + G+D +R  ++               ++Q     
Sbjct: 638 ---DEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVMTT----------DYWEDQRLGKT 684

Query: 451 VFYVQY-AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509
           +      AY + R+  R           ++   + +P+       E  ++  LAE  R++
Sbjct: 685 IIQTNIDAYRKLRNTVRWMLGTLAHDKGEVVALSEMPEL------ERLMLHRLAELDRLV 738

Query: 510 ENATIAQEPYKLAFYLYDLAS-VFHGHWSHGREN 542
                A +  ++A  L D ++      +   R++
Sbjct: 739 REGYDAFDFKRIARSLIDFSNVELSAFYFDIRKD 772


>gi|37521947|ref|NP_925324.1| glutamyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932051|sp|Q7NI06|SYE_GLOVI RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|35212946|dbj|BAC90319.1| glutamyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 530

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 98/289 (33%), Gaps = 40/289 (13%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLA 178
           +  +  +PTG  H+G    AV+  +LA       L+     +  RE ++  A   I  L 
Sbjct: 21  VTRIGPSPTGKAHIGTALQAVINRSLADGSGGAFLLRIE--DTDRERFVEGA---IEDLL 75

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            ++ W   +     D  +  G   G Y++     +    + +L+            +   
Sbjct: 76  AALDWLGIR----PDESVAHGGAYGPYVQSERLPIYQAAARQLV------------EVGH 119

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                   + L+++ +          + R   +  R+ ++     G      L  P    
Sbjct: 120 AYYCFCTPERLESVRMAQQAAGKPTMYDRHCRNLGREEVEKRLATGEKAVVRLKVPDGTE 179

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ R ++ F S  + D     LLKSDG  TY    LA     +    + +I   G 
Sbjct: 180 IAFDDLARGRIAFESQTIDDS---VLLKSDGFPTYH---LAVVVDDHLMRVNQIIR--GE 231

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           +      +   +         +I         + RD    K+SKR+GD 
Sbjct: 232 EWIPSTPKHVLLYQYFGWPMPRIAH-----TPILRDMSRRKLSKRSGDT 275


>gi|15602168|ref|NP_245240.1| methionyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431880|sp|P57838|SYM_PASMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12720538|gb|AAK02387.1| MetG [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 682

 Score = 40.3 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 90/306 (29%), Gaps = 64/306 (20%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +I          + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKAWIKSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFKIPDTEDKYFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK--SDGSYTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G + D    K  S   Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +      +KMSK  G FI     + 
Sbjct: 300 ----HSLF---WPAMLDGCDLRKPT-NVFAHGYVTV----NGVKMSKSRGTFIQASTYLR 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +  + +R+    + N+ + D D        + N     ++     RS    A  I    
Sbjct: 348 HLAPEYLRYYYAAKLNNRIEDLDLNLEDFVQRLNADVVNKFVNLASRS----AGFITKRF 403

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT------IAQEPYKLAFYLYDLA 529
           D  L      P+              LAE+   +E A         +E  K+   +  LA
Sbjct: 404 DGKLSAEIAEPE-------------LLAEF---VEKAAQIATYYEEREFGKVVREVMQLA 447

Query: 530 SVFHGH 535
              + +
Sbjct: 448 DKANKY 453


>gi|328472490|gb|EGF43353.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 857

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|313682539|ref|YP_004060277.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155399|gb|ADR34077.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 649

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 76/482 (15%), Positives = 140/482 (29%), Gaps = 81/482 (16%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
             G  H+GH     + DTLA      G E       ++ G +I   A+      QQ    
Sbjct: 12  VNGEAHIGHAYTTFIADTLARHSRLIGNETYFLTGTDEHGQKIEESAVKQNKPTQQFADE 71

Query: 192 NDSDL--PEGYYPGVYLKHV-GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             +        +   Y + +   + A K   +       +   I KD+            
Sbjct: 72  ISATFRNLWDEFNISYDQFIRTTDDAHKKGVQAAFLKMFENGDIYKDFYEGNYC------ 125

Query: 249 LKALNIQHDIFISEDDFHRG----DPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKC 302
                +  + F  E     G    D      I+   +    +  YE  L        +  
Sbjct: 126 -----VSCETFFPESQLMDGGCCPDCGRATTIVKEESYFFRLSKYEKPLLDYYEAHPEFI 180

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD-------LAYFKCKYERGF------ 349
               ++    S + G   D  + ++  S+     +       + Y        +      
Sbjct: 181 LPKSRRNEVISFVKGGLNDLSVTRTSFSWGVHLPESLNEPKHVMYVWLDALMNYVTALGY 240

Query: 350 ----DNMIY------VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
                 M++      ++G D    H+ Y     A   ++     +    +       RDG
Sbjct: 241 GSDESKMLFWPANVQLVGKDILRFHAIY---WPAFLMSLGLPLPK---HIGAHGWWTRDG 294

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455
              KMSK  G+ +  R V    G ++ R+ M  R+     D DF +     + N      
Sbjct: 295 E--KMSKSKGNVVDPREVSKHYGVENFRYFM-MREVPFGQDGDFSQRALIDRMNSDLSND 351

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATI 514
                 R I           DF +   NV      E + +   L          +E    
Sbjct: 352 LGNLLNRII----GMSEKYSDFVIDSGNVAQYHAKELNDAHGIL--------DSLETYLD 399

Query: 515 AQEPYKLAFYLYDLASVF---HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571
             + ++   YL +L  VF   +          +++  + +        L  V  VA+++ 
Sbjct: 400 ELQLHR---YLEELWKVFTIGNKAIEEHAPWVKIKEGRTDEA------LATVALVANLLA 450

Query: 572 SG 573
             
Sbjct: 451 KA 452


>gi|261211999|ref|ZP_05926285.1| leucyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838607|gb|EEX65258.1| leucyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|229505444|ref|ZP_04394954.1| leucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510886|ref|ZP_04400365.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229512951|ref|ZP_04402417.1| leucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229518007|ref|ZP_04407451.1| leucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608463|ref|YP_002879111.1| leucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|229344722|gb|EEO09696.1| leucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229349844|gb|EEO14798.1| leucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350851|gb|EEO15792.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357667|gb|EEO22584.1| leucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371118|gb|ACQ61541.1| leucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
          Length = 878

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 26  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 85

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 86  QRLQGKNV 93


>gi|269214495|ref|ZP_05986692.2| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209638|gb|EEZ76093.1| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 967

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 98  PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 157

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 158 RLNGFNVM 165


>gi|153213841|ref|ZP_01949047.1| leucyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124115675|gb|EAY34495.1| leucyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|109946907|ref|YP_664135.1| leucyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066333|sp|Q17YZ0|SYL_HELAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109714128|emb|CAJ99136.1| leuS [Helicobacter acinonychis str. Sheeba]
          Length = 806

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +         K  I  +   P+G +H+GH R   +GD L       
Sbjct: 6   IEKKWQEFWHQNESFEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLH 65

Query: 158 GYEV 161
            Y V
Sbjct: 66  HYNV 69


>gi|254230149|ref|ZP_04923544.1| glutamyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262394953|ref|YP_003286807.1| glutamyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937342|gb|EDN56205.1| glutamyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338547|gb|ACY52342.1| glutamyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 475

 Score = 40.3 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK  +E             K Y+ + ++  IR +
Sbjct: 61  MEWLGLEWDEGPYYQTQRFDRYNEMVDKLLAEG---------KAYKCYASKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +  R+  +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|312870174|ref|ZP_07730307.1| leucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094294|gb|EFQ52605.1| leucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 806

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 528 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 587

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 588 NPDDIVDKYGADTLR 602


>gi|270339726|ref|ZP_06005817.2| isoleucine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333958|gb|EFA44744.1| isoleucine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 1235

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 113/306 (36%), Gaps = 53/306 (17%)

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +ND       L+ S FW     ++ +++   E     V   +   E +        N  +
Sbjct: 585 LNDW-----NLSRSRFWGTPLPVWRDEN-HNEKCIGSVEELYNEIEKSVAAGVMKNNPLK 638

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDN----L 280
           +K   +  DYS +      R DL    I + + ++++    +R +   I    D+     
Sbjct: 639 DKGF-VPGDYSQE---NYDRIDLHRPYIDYVVLVNDEGKPMYR-ESDLIDVWFDSGAMPY 693

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
           A+  Y +EG +     K T   + + +  L  ST  G  V         +  +F AD   
Sbjct: 694 AQLHYPFEGAINAEGLKKTGMSEAEYRASLVNSTYEGTPV---------APAFFPAD--- 741

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                       I   G D   G+   L A+A  V +  +  NV+   LV    D    K
Sbjct: 742 -----------FINE-GVDQTRGWFFTLHAIATMVFDSVSFKNVISSGLV---LDAKGNK 786

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPV 451
           MSK  G+      ++++ G+D VRF M+      + L FD   + E  ++          
Sbjct: 787 MSKHVGNVTNPFEMIEKYGADPVRFYMMTNSEPWDNLKFDPNGIDEVRRKFFGTLYNTYS 846

Query: 452 FYVQYA 457
           F+  YA
Sbjct: 847 FFALYA 852


>gi|262402700|ref|ZP_06079261.1| leucyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351482|gb|EEZ00615.1| leucyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|260774879|ref|ZP_05883780.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609134|gb|EEX35292.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 857

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|258621973|ref|ZP_05717002.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258585726|gb|EEW10446.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 894

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 42  NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 101

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 102 QRLQGKNV 109


>gi|255660361|ref|ZP_05405770.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 756

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS-GY-----VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+  +               +   K     L+ + + L  DG   KMSK  G+
Sbjct: 483 LYVGGAEHAVLHLLYARFWHKFLFDKKLVSTKEPFQKLINQGMVLGPDGK--KMSKSKGN 540

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            I    +VD  G+D++R  ++
Sbjct: 541 TINPTPLVDSHGADALRLYLM 561


>gi|323341519|ref|ZP_08081759.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091057|gb|EFZ33689.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 804

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 79/217 (36%), Gaps = 31/217 (14%)

Query: 234 KDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
           K  ++  M++ + +     K +N +   +      + G+P P+    D       V E  
Sbjct: 388 KKEAIDKMVEWLEEKGIGKKKVNYRLRDWTFSRQRYWGEPIPVIHWEDG--ETTLVPEDE 445

Query: 291 LPPPKSKTTQK----------CDMDRK-QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           LP    K T             ++D    ++ ++   G      + +  GS  YF   + 
Sbjct: 446 LPLRLPKATDIKPSGTGESPLANLDDWVNVVDKNGRKGKRETNTMPQWAGSSWYFLRYVD 505

Query: 340 YFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLC 386
                    +D +       +YV G++H+     Y +        +     K     L+ 
Sbjct: 506 PHNQGKLADYDKLKHWMAVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVN 565

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           + + L  +    KMSK  G+ I    +V++ G+D++R
Sbjct: 566 QGMILGNN--HEKMSKSKGNVINPDDIVEQYGADTLR 600


>gi|209695777|ref|YP_002263707.1| glutamyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064686|sp|B6EJQ3|SYE_ALISL RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|208009730|emb|CAQ80034.1| glutamyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 474

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 94/280 (33%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G  V R   I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFAK--NKGGEFVLR---IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ D      L   E+K       Y+ + ++  IR +
Sbjct: 61  MKWMGMEWDEGPYYQSKRFDRYNEVVD------LLLSEDKAYKC---YASKELLDEIRTE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +             +  R D +  + +  N A + G         PK  +    D  R 
Sbjct: 112 QEE----------NKEMARYDANHPKIVAANAAAKEGDASVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G   +I   G DH     R 
Sbjct: 162 RIEISNSQLD---DLIIRRTDGAPTYNFVVV---VDDWDMGITQVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPMFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|188997238|ref|YP_001931489.1| glutamyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229470643|sp|B2V5J1|SYE_SULSY RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|188932305|gb|ACD66935.1| glutamyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 478

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 102/311 (32%), Gaps = 52/311 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR---EYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+     +       ++     ++ R   EY           L  
Sbjct: 7   APSPTGYLHLGNARTALFNYLFSRHENATFILRIEDTDLERSKKEY--------EEMLME 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            + W   +     D+  P     G Y +    E+  KY  +LL   +  +    ++   Q
Sbjct: 59  DLKWMGIEWDEGPDAGGP----HGPYRQSERLEIYMKYVDKLLKSGDAYYCYCTEEELEQ 114

Query: 240 AMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
              K I +    +      ++   E  F+ G                 +   I      K
Sbjct: 115 EREKAIAEGRPYRYSGKCRNLTPEERAFYEGKS---------------IKPVIRFKVPDK 159

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    D+ R  +   +   GD     +++ DG   Y    +         G  ++I   G
Sbjct: 160 TVVFEDIIRGHVEIDTKEFGDF---VIVRQDGMPVYNFVVV---IDDALMGITHVIR--G 211

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A+     Q   L    + L  D    K+SKR G  +++R + D+ 
Sbjct: 212 EDHLSNTPKQIVIYEALGFAIPQFAHL---PIILGEDRT--KLSKRHG-AVSVRALKDDG 265

Query: 418 GSDSVRFMMLW 428
                 F  L 
Sbjct: 266 FISEAVFNYLS 276


>gi|145633270|ref|ZP_01789001.1| putative ATPase [Haemophilus influenzae 3655]
 gi|144986116|gb|EDJ92706.1| putative ATPase [Haemophilus influenzae 3655]
          Length = 682

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 66/215 (30%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D +    + SD   Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFTHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNT 382


>gi|319745565|gb|EFV97867.1| methionine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 671

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++V     +++ G +I   A             
Sbjct: 22  PSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAEEA---------- 71

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G   + K   ELL+   +K++     Y  +A+ KI    L  
Sbjct: 72  -------GITPQEYVD--GMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQ 122

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G +  G+ P       +   +  + 
Sbjct: 123 GDIYLGEYTGWYSVSDEEFFTESQLAEVYRD--ENGNMIGGVAPS----GHEVEKVSEES 176

Query: 309 LLFRSTMVGDDV------DRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
             FR +   D +          ++ DG               DLA  +  Y  G      
Sbjct: 177 YFFRMSKYADRLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSN 236

Query: 349 FDNMIYV---------------MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             ++IYV                  D S Y K   A    + +   + + +   ++ +  
Sbjct: 237 PKHVIYVWIDALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMAL 296

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 297 DLPLPKRLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 345


>gi|289664649|ref|ZP_06486230.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 467

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 92/296 (31%), Gaps = 63/296 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  RE        Q    A+
Sbjct: 8   APSPTGYLHIGGARTALYCWLEARHRGGQFVLRI-----EDTDRE-----RSTQ---AAI 54

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                  + L  N  + P      +       E           +   + L  +++ ++ 
Sbjct: 55  DAILEAMEWLGLNYDEGPIYQTQRIARYQEVAEQLLAQGKAYYAYETREELDAMREAAMA 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              K           +++    E +  +R DP+ +                    P   T
Sbjct: 115 KQEK----------PRYNGAAREQNLPYRDDPNRV---------------IRFKNPIGGT 149

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ + ++   ++ +    D  + + DG  TY   + A     ++ G   +I   G 
Sbjct: 150 VLFDDLIKGRIEIANSELD---DMVIFRPDGFPTY---NFAVVVDDWDMGITEVIR--GD 201

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
           DH     R   +  A+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 202 DHINNTPRQINIYEALGAPVPKFAHM-----PMILDEQGAKLSKRTGAADVMQYKD 252


>gi|283853205|ref|ZP_06370457.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571378|gb|EFC19386.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 837

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K   ++   G  +         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 6   PEDVEKKWQTLWEEGGHFRVEADPSRPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARFK 65

Query: 155 AFSGYEV 161
              G  V
Sbjct: 66  RMEGNNV 72


>gi|282850252|ref|ZP_06259631.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579745|gb|EFB85149.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 822

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +         K  +  +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMK 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|218708739|ref|YP_002416360.1| leucyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782843|sp|B7VKF7|SYL_VIBSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218321758|emb|CAV17713.1| Leucyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|254411359|ref|ZP_05025136.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196181860|gb|EDX76847.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 482

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 105/348 (30%), Gaps = 71/348 (20%)

Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE-VTREYY 166
           S IE G+  +        ++         H+GH R  ++ DT    + + GY+    + +
Sbjct: 17  SPIEAGKVRMYCCGITAYDYC--------HLGHARTCIIWDTARRYLQWRGYDVNYVQNF 68

Query: 167 --IND----AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGV--YLKHVGKELAD 215
             I+D       Q  T   +V  R+ QA + + + L       YP     L  + + + D
Sbjct: 69  TDIDDKILNRARQEGTSMEAVSERFIQAYFEDMARLNVDEADAYPRATHCLDGIKRLIYD 128

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                            V+ +     +   + +               D   G    +  
Sbjct: 129 LEQKNYAYPAAGDVYYAVRRFGEYGKLSGRKLE---------------DLQAGASGRVEV 173

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335
                 ++   ++  L           +                         G   +  
Sbjct: 174 ADAEAGKKKDAFDFALWKGSKPGEPAWESPWGA--------------------GRPGWHI 213

Query: 336 ADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
              A  +       D  I+  GSD     H   + + EAV       +      L   + 
Sbjct: 214 ECSAMIRDNLGDTVD--IHAGGSDLVFPHHENEIAQSEAV-----TGQPLARYWLHTGMV 266

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGS-DSVRFMMLWRKNSELLDF 437
           +       KMSK  G+FIT+R ++D      +VR  +L  +  + LDF
Sbjct: 267 IVNG---EKMSKSLGNFITIRDLLDRATDPMAVRLFVLQAQYRKPLDF 311


>gi|61657517|emb|CAI44428.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 843

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + K    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 25  PQEIEKKWQEVWEEKKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 84

Query: 155 AFSGYEV 161
              GY V
Sbjct: 85  RMRGYNV 91


>gi|89092515|ref|ZP_01165468.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083027|gb|EAR62246.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 679

 Score = 40.3 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 40/187 (21%)

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           Y +   D+AYF                  H+ +     A+      +K            
Sbjct: 288 YHFIGKDIAYF------------------HTLF---WPAMLEGAGFRKPNGVFCHGF--- 323

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           L  DG   KMSK  G FI     ++ +  + +R+    + +S + D D      + + N 
Sbjct: 324 LTVDGQ--KMSKSRGTFIMAETYLNHLRPEYLRYYFAAKLSSGIDDIDLNLEDFRMRVNA 381

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                          R A  I    D +L  + V P+      +              I 
Sbjct: 382 ----DLVNKVINIASRCAGFIKKKFDGELASQLVEPELYTEAVAA----------GESIA 427

Query: 511 NATIAQE 517
           +A   +E
Sbjct: 428 SAYENRE 434


>gi|312867085|ref|ZP_07727295.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097214|gb|EFQ55448.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 663

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 105/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       Y+V                 L    +  Q    
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRMMNYDV------------FYLTGLDEHGQKIQQKAE 61

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 62  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 114

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  G+ P       +   +  + 
Sbjct: 115 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVIGGVAPS----GHEVEWVSEES 168

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 169 YFLRLSKYQDRLVEFFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSN 228

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G     +    +     V   V +   + + +   ++ +  
Sbjct: 229 PKHVVYVWIDALLNYVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 288

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 289 DVKLPERLIAHGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMR 337


>gi|306834069|ref|ZP_07467189.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423642|gb|EFM26788.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 667

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 112/353 (31%), Gaps = 84/353 (23%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       +EV     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +  ++   +  E+L+   +K++    DY  + +  +    L  
Sbjct: 66  -------GITPQAYVDGMAADVKKLW--EMLDISYDKFIRTTDDYHEKVVADVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  GI P       +   +  + 
Sbjct: 117 DDIYLGEYSGWYSVSDEEFFTESQLEEVFRD--ENGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGDDVDRPL---------LKSDGSYTYF--------AADLA------YFKCKY 345
              R   +G   DR +         ++ DG               DLA       +  K 
Sbjct: 171 YFLR---LGKYADRLVEFFHAYPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKV 227

Query: 346 ERGFDNMIYVM-----------GSDHSGY-----VKRLEAVAAAVSEKKAQINVLLCELV 389
                +++YV            G     +           V   V +   + + +   ++
Sbjct: 228 PSNPKHVVYVWIDALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIM 287

Query: 390 RLYRDGM--------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
            +  D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 288 LMMLDMKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 340


>gi|283458741|ref|YP_003363379.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134794|dbj|BAI65559.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 472

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 102/317 (32%), Gaps = 26/317 (8%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I +  A   G  H+GH R A+V D L+  M + G +VT    + D   +I   +     
Sbjct: 25  RIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYRGLKVTTVRNVTDIDDKILAKSAESME 84

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
              +  + N+      Y            L      +   +       I + +++   + 
Sbjct: 85  PGFEGEFPNEQWWALAYRFEKVFAQAYAAL----GIDPPTYEPRATGHIPEMFALIQRLI 140

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
                  AL+   D++     + +         ++++             P+     K  
Sbjct: 141 DRGHAYPALDDSGDVYFDVRSWDKYGA-LTNQSVEDMQDSADADPRGKRDPRDFALWKGY 199

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSD-H 360
            + + L           + P  +    +    + +A  Y   +++      I+  G D  
Sbjct: 200 KEGEPLT-------ASWESPWGRGRPGWHLECSAMAGKYLGSRFD------IHGGGLDLR 246

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             + +   A + A  +  A   +       +  +G   KMSK  G+ I+   ++      
Sbjct: 247 FPHHENELAQSTAAGDDFANFWMHNG---MVTYEGE--KMSKSIGNTISPAQMLQMARPL 301

Query: 421 SVRFMMLWRKNSELLDF 437
            VR+ +       +LD+
Sbjct: 302 VVRYYLGSAHYRSILDY 318


>gi|238927290|ref|ZP_04659050.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884877|gb|EEQ48515.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 823

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +  ++   A  +   +   N+L   +V   +DG   KMSK  G+ ++   ++D  G+D+ 
Sbjct: 550 FFTKVLRDAGMLDFDEPFTNLLTQGMV--IKDGA--KMSKSLGNVVSPEEIIDRYGADTA 605

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R  +L+   +  +D D     +Q  E    ++     R   I  Q  +            
Sbjct: 606 RLFILF---AAPVDRDLDW-SDQGVEGAYRFLG----RVWRILGQFAETIKGAPASCDAA 657

Query: 483 NVIPQESEF 491
           ++  +E+E 
Sbjct: 658 SLSTEEAEL 666



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K           +      K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 11  AKWQKIWETEHSCHTEMDAAKPKYYALEMF-PYPSGKLHMGHVRNYSIGDVIARFRTMEG 69

Query: 159 YEV 161
           Y V
Sbjct: 70  YNV 72


>gi|257053975|ref|YP_003131808.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692738|gb|ACV13075.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 697

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 73/443 (16%), Positives = 124/443 (27%), Gaps = 81/443 (18%)

Query: 126 EFVSANPT----------GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
           EF + NP           G +H+GH R  V GD L   +   G +       +  G  I 
Sbjct: 5   EFPTENPAVVTCGLPYANGDLHIGHLRTYVGGDVLTRSLEKLGQQTAFVSGSDMHGTPIA 64

Query: 176 T-----------LALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADK------- 216
                        AL    +Y++     D D    G+      + +  E+ +        
Sbjct: 65  VQAIEDDIDPEAFALEYHEQYEETFPEFDVDFDNYGHTHQETNRELTHEIVEALEAAGYV 124

Query: 217 -YSSELLNFPEEKWLPIVKDYSV------------QAMMKIIRDDLKALNIQHDIF---- 259
                 + +  E   P+   Y V                +     L+   I+  +     
Sbjct: 125 DEQEIKVAWDPEDDQPLPDRYVVGTCPYCGETARGDECDEGCGRHLEPGEIEDPVSKISG 184

Query: 260 ----ISEDDFHRGDPSPIRD----IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
                 E      + S + D     +D L              +      C        F
Sbjct: 185 NPAEYRERTHKFFEVSKLADYLSGFLDRLEGTANAKNQPRQWIEEGLQDWCITRDMDWGF 244

Query: 312 ---RSTMVGDDVDRPLLK---SDGSYTYFAADLAYFKCKYERGFDN---------MIYVM 356
                   GDD    L+     D    Y A+   Y        +D          +I+V+
Sbjct: 245 DYPEVDDTGDDTAEDLVLYVWVDAPIEYIASTKQYTDRVGPEAYDWAETWKESGEIIHVI 304

Query: 357 GSD--HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D      +    A+       + +  V    +     DG     S+     I  R  +
Sbjct: 305 GRDIIQHHTIF-WPAMLHVAEFNEPRAVVASGFM---SLDGDAFSTSRNR--AIWAREYL 358

Query: 415 DE-VGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           DE    D +R+ +       + +DF + + +E+     V  V       RS+    ++  
Sbjct: 359 DEGFHPDLLRYYLTTVGGFQDDIDFSWDRFRERVNGELVGTV--GNFAYRSLLFADRNYG 416

Query: 473 PDLDFDLFPRNVIPQESEFDTSE 495
              D DL P      E   +  E
Sbjct: 417 GTPDADLSPDVEDRIEDAIEDFE 439


>gi|289811662|ref|ZP_06542291.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 48

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 12/31 (38%)

Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61
             + +      G    N  M +++ LG+ P
Sbjct: 11 EPQVRQSAKVQFGDYQANGMMAVAKKLGMAP 41


>gi|148239596|ref|YP_001224983.1| leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|189083176|sp|A5GL71|SYL_SYNPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147848135|emb|CAK23686.1| Leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 878

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGDTL 150
              P  L +   S       Y       G            P+G +H+GH R  V+ D +
Sbjct: 19  RYDPIALEQRWQSQWQQDDLYATRSPEPGQNAFYALSMFPYPSGSLHMGHVRNYVITDVI 78

Query: 151 ASLMAFSG 158
           A      G
Sbjct: 79  ARAQRMRG 86


>gi|118475123|ref|YP_891315.1| glutamylglutaminyl-tRNA synthetase [Campylobacter fetus subsp.
           fetus 82-40]
 gi|229559944|sp|A0RM82|SYE1_CAMFF RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|118414349|gb|ABK82769.1| glutamyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 429

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 50/281 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MH+G+ R A+  + + SL   SG+                             
Sbjct: 5   APSPTGDMHIGNLRAAIF-NYICSLQDNSGF----------------------------I 35

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   D+D           K +   L          + + K L   ++++ + + +     
Sbjct: 36  LRIEDTDNARNIDGKD--KEIFDILTKFNIKWDTLYYQSKNLKFHQEFAAKLLAEK---- 89

Query: 249 LKALNIQHDIFISEDDFH----RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
            KA     D    E         G P       +NL+    +        + K   +   
Sbjct: 90  -KAFLCFCDETTLESKKEAAKTAGKPYRYDGTCENLSDDDVLSNPRPAAVRLKIKNEPQS 148

Query: 305 DRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
               +         ++D   LL++D + TY   + A        G   +I   G DH   
Sbjct: 149 FYDAIKGEVKFEPQNIDSFVLLRADKTPTY---NFACAIDDMLEGVTFVIR--GEDHVSN 203

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +   +  A+     +I      ++    +    KMSKR 
Sbjct: 204 TPKQNLIREALGY-TGKIGYAHLPII---LNKEGKKMSKRE 240


>gi|87201227|ref|YP_498484.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|123749671|sp|Q2G3C3|SYL_NOVAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|87136908|gb|ABD27650.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 848

 Score = 40.3 bits (93), Expect = 0.91,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 43/124 (34%), Gaps = 14/124 (11%)

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
           G  IKMSK   + +    +V + G+D++R+ ML     E    D     E   E    +V
Sbjct: 621 GRVIKMSKSKKNVVDPDEIVAKYGADAIRWFMLSDSPPER---DLPW-SEAGIEGCARFV 676

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL-----IVHLAEYPRVI 509
           Q    R   +F Q        D  L  +      +     E  L     +  + E    +
Sbjct: 677 Q----RLWRLFGQYDAAATGEDKALDRKAHQTVHAVASDIE-ALGFNKAVARIYELTGAV 731

Query: 510 ENAT 513
           E A 
Sbjct: 732 EKAA 735



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+        +      +  +      +  +  +   P+G +H+GH R   +GD LA
Sbjct: 13  RFDPATADTRWQRVWDEKQSFRADDSSTKPRSYVLEMFPYPSGRIHIGHVRNYTMGDVLA 72

Query: 152 SLMAFSGYEV 161
                 G+EV
Sbjct: 73  RYKRMRGFEV 82


>gi|297813469|ref|XP_002874618.1| hypothetical protein ARALYDRAFT_489875 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320455|gb|EFH50877.1| hypothetical protein ARALYDRAFT_489875 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1190

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  ++ A+ EK A    L+C  + L  DG   KMSK+  ++     V+D
Sbjct: 592 GLDQTRGWFYTLMVLSTALFEKPA-FKHLICNGLVLAEDGK--KMSKKLRNYPPPLEVID 648

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCK 441
           E G+D+VR  ++           F K
Sbjct: 649 EYGADAVRLYLINSPVVRAETLRFKK 674


>gi|269215644|ref|ZP_06159498.1| valine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131131|gb|EEZ62206.1| valine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 901

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 35/210 (16%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            + + +  + G  YGR+   +   V I     N TG +H+GH     + DT        G
Sbjct: 28  EERMLAKWLDGAYYGRSKGNEDRTVVI--PPPNVTGMLHMGHALDDTIQDTFVRFCRMKG 85

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y        + AG       ++   +  + L                          +  
Sbjct: 86  YSTRWILGTDHAG-------IATQTKVDKKL-------------------------KEEG 113

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
              L    EK+L    D+  +    II + +K +    D    +          +R +  
Sbjct: 114 VSRLEIGREKFLEACWDWRREYG-GIIVEQIKRMGCSVDFDDEKFTMSPEYAKAVRKVFV 172

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +    G VY G        +      D + 
Sbjct: 173 DWYHDGLVYRGKRIVNWCPSCTTAISDDEA 202


>gi|302879260|ref|YP_003847824.1| isoleucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582049|gb|ADL56060.1| isoleucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 943

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +       A++ +     +L    V    DG   KMSK  G+ I  +
Sbjct: 577 LYLEGSDQHRGWFQSSLLTGCAINGRAPFNALLTHGFVV---DGNGHKMSKSKGNVIAPQ 633

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            + D +G+D +R        S  L      +K   +         +Y R R+  +     
Sbjct: 634 KIFDTLGADILRLWTASTDYSGELTISDEILKRVVE---------SYRRIRNTLKFLLAN 684

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520
             D D       V     E D   L +   L      +       E + 
Sbjct: 685 ISDFDATRDALPV-SDWLEIDRYALHMTQKLQ---DEVRADYERYEFHL 729


>gi|227543882|ref|ZP_03973931.1| leucine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909628|ref|ZP_07127089.1| leucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186143|gb|EEI66214.1| leucine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300893493|gb|EFK86852.1| leucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 806

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 528 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 587

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 588 NPDDIVDQYGADTLR 602


>gi|254482848|ref|ZP_05096085.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214036929|gb|EEB77599.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 934

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 85/294 (28%), Gaps = 52/294 (17%)

Query: 159 YEVTREY--YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKEL 213
           Y        Y+ D         +         L   D+ L E  Y   Y    +H    +
Sbjct: 353 YNPVGSNGVYLPDTEFFAGQFVMKANSAIIDLLRERDALLHEEAYEHSYPHCWRHKTPII 412

Query: 214 ADKYSSELLNFPEE-------------KWLPIVKDYSVQAMMKIIRDDL----KALNIQH 256
                   +N  +              +WLP      + +M++   D      +   +  
Sbjct: 413 FRATPQWFVNMHQRGLLDAAKAAVEGVEWLPEWGRARIDSMLEDRPDWCISRQRTWGVPI 472

Query: 257 DIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLL 310
            +FI       H      I  +   +   G      L P +       D ++      + 
Sbjct: 473 TLFIHRQSGELHPRSSELIEQVALLIEEAGIDAWFDLEPAELLGADADDYEKVTDTLDVW 532

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEA 369
           F S   G      L + DG   +  ADL               Y+ GSD   G+ +    
Sbjct: 533 FDS---GVTHACVLRQRDG--LHSPADL---------------YLEGSDQHRGWFQSSLL 572

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                  +     VL         DG   KMSK  G+ +    V+ ++G+D +R
Sbjct: 573 TGIGAYGEAPYKTVLTHGF---TVDGEGRKMSKSIGNIVPAAKVMKDLGADILR 623


>gi|223939193|ref|ZP_03631075.1| leucyl-tRNA synthetase [bacterium Ellin514]
 gi|223892146|gb|EEF58625.1| leucyl-tRNA synthetase [bacterium Ellin514]
          Length = 909

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+     Y +    V   + +         L+ + + L  DG   KMSK  G+
Sbjct: 603 LYVGGTEHAVLHLLYARFWHKVLFDLGQVSTPEPFFKLVNQGLILGEDGQ--KMSKSRGN 660

Query: 407 FITLRHVVDEVGSDSVR 423
            +    V+ E G+D+ R
Sbjct: 661 VVNPDDVLGEYGADAFR 677


>gi|89054333|ref|YP_509784.1| glutamyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|123286689|sp|Q28RA3|SYE1_JANSC RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|88863882|gb|ABD54759.1| glutamyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 470

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 95/315 (30%), Gaps = 61/315 (19%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
             +  ++ +PTG MH+G  R  +     A                           L + 
Sbjct: 8   PVVTRIAPSPTGTMHIGTARTGLFNWLFAR-------------------KHGGKFVLRIE 48

Query: 183 WRYQQALYNNDSDLPEGY-------YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
              ++      +             Y G  +    +  AD++         E        
Sbjct: 49  DTDRERSTPEATQAILDGMAWLGLDYDGEAVSQFAR--ADRHREVAEQMLAEGHAYKC-- 104

Query: 236 YSVQAMMKIIRDDLKALNIQ--HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
           +S Q  +   RD  KA            E   H   P  IR                L  
Sbjct: 105 FSTQDEIAAFRDAAKADGRSTLFLSPWREASDHPDAPYVIR----------------LKA 148

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+  TT   D  +  +  ++  +    D  LL+SDG+ TY     A     ++ G  ++ 
Sbjct: 149 PRDGTTVIRDRVQSDVTIQNATLD---DMILLRSDGTPTYMH---AVVVDDHDMGVTHV- 201

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G DH     R   + AA+   +      +   + L       K+SKR G    + + 
Sbjct: 202 -VRGDDHLNNAARQIQIYAAMGWAEP-----VWSHIPLIHGDDGKKLSKRHGATGVMEYA 255

Query: 414 VDEVGSDSVRFMMLW 428
              + + ++R  +  
Sbjct: 256 EMGIPAAAMRNYLTR 270


>gi|77406524|ref|ZP_00783576.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77174863|gb|EAO77680.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 665

 Score = 40.3 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G   + K   ELL+   +K++     Y  +A+ KI    L  
Sbjct: 66  -------GITPQEYVD--GMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G +  G+ P       +   +  + 
Sbjct: 117 GDIYLGEYTGWYSVSDEEFFTESQLAEVYRD--ENGNMIGGVAPS----GHEVEKVSEES 170

Query: 309 LLFRSTMVGDDV------DRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
             FR +   D +          ++ DG               DLA  +  Y  G      
Sbjct: 171 YFFRMSKYADRLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSN 230

Query: 349 FDNMIYV---------------MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             ++IYV                  D S Y K   A    + +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMAL 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DLPLPKRLVAHGWFVMQDGKMSKSKGNVVYPEMLVEXXGLDPLRYYLMR 339


>gi|332709003|ref|ZP_08428973.1| valyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352192|gb|EGJ31762.1| valyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 1110

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 107/315 (33%), Gaps = 36/315 (11%)

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
           L     E  D++ S +  F  E+W  + +D+ V+     I   L     Q   +    + 
Sbjct: 371 LADRALESLDQHHSPV--FIPERWTKVYRDWLVKLKDWCISRQLW-WGHQIPAWYVVSET 427

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVD 321
           +    S    I+ +   +             K  Q  D+        L   STM   D  
Sbjct: 428 NGTITSETPFIVAHHEAEAKKKAIAKFGENVKLEQDPDVLDTWFSSGLWPFSTMGWPDQT 487

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381
           + L       TY      Y       GFD +I+         V R+  +A   + +    
Sbjct: 488 KDLK------TY------YPTTTLVTGFD-IIFFW-------VARMTMMARHFTGQMPFK 527

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
           +V +  LV   RD    KMSK A + I    ++D+ G+D+VR+ ++        D     
Sbjct: 528 SVYIHGLV---RDENNKKMSKSANNGIDPLILIDKYGTDAVRYTLVREVAGAGQDIRLEY 584

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
            ++  +      V+ +      ++  A+ +  +LD         P     +  +  +   
Sbjct: 585 DRKTDES---ASVEASRNFANKLWNAARFVMLNLDGKTPEELGQPTVEALELCDRWI--- 638

Query: 502 LAEYPRVIENATIAQ 516
           L+ + +V+       
Sbjct: 639 LSRFHQVVRQTRDDL 653


>gi|239625541|ref|ZP_04668572.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519771|gb|EEQ59637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 469

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 47/376 (12%), Positives = 101/376 (26%), Gaps = 52/376 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DT+     + GY+V       D   +I   A+             D+D
Sbjct: 35  IHIGNARPMIVFDTVRRYFEYKGYDVKYVSNFTDVDDKIIKKAIE---------EGVDAD 85

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                Y     K +        +       E   +       +Q ++      +      
Sbjct: 86  TVSQRYIEECKKDMAAMNVKPATVHPQATQEICGM----LEMIQTLIDKGHAYVAKDGTV 141

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--- 312
           +    S  ++ +     + ++           E     P      K   + +        
Sbjct: 142 YFRTGSFKEYGKLSHKNLDELQSGFREIKVTGEEGKEDPSDFVLWKPKKEGEPFWESPWC 201

Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372
           +   G  ++  ++       Y    +       +  F +        H   + + E    
Sbjct: 202 NGRPGWHIECSVMSKR----YLGEQIDIHAGGEDLIFPH--------HENEIAQSECA-- 247

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
                K      +      + +    KMSK  G+F T+R + ++     +RF ML     
Sbjct: 248 ---NDKPFATYWMH---NAFLNIDNKKMSKSLGNFFTVREISEKYDLQVLRFFMLSAHYR 301

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
             L+F    ++                    + R    +    D +          +E  
Sbjct: 302 SPLNFSADLMEASKNG---------------LERILTCVDKLRDLEAKAEGAAQTCAEQG 346

Query: 493 TSELQLIVHLAEYPRV 508
           + E      L  +   
Sbjct: 347 SMEEA-GKLLGRFEEA 361


>gi|148827028|ref|YP_001291781.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|187647724|sp|A5UF42|SYM_HAEIG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148718270|gb|ABQ99397.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 682

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 66/215 (30%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D +    + SD   Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNT 382


>gi|178056945|ref|NP_001116686.1| valyl-tRNA synthetase, mitochondrial precursor [Sus scrofa]
 gi|75045193|sp|Q767M3|SYVM_PIG RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|41529161|dbj|BAD08423.1| KIAA1885 protein [Sus scrofa]
 gi|41529164|dbj|BAD08425.1| KIAA1885 protein [Sus scrofa]
          Length = 1062

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 38/201 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  ++    +           R     G   ++     N TG +H+GH     + D L 
Sbjct: 108 YVEAAWYPWWVREGFFKPEYQTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALV 167

Query: 152 SLMAFSGYEVTREYYI---NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
                 G    R  ++   + AG       ++     ++ L+            G+  + 
Sbjct: 168 RWHRMRG---DRVLWVPGSDHAG-------IATQAVVEKKLWKE---------RGLRRRE 208

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           + +E    +  E+  + EEK   I +              L+ L    D          G
Sbjct: 209 LSRE---DFLREVWKWKEEKGGEICQQ-------------LRVLGASLDWDRECFTMDAG 252

Query: 269 DPSPIRDIIDNLARQGYVYEG 289
               + +    L + G +Y  
Sbjct: 253 SSVAVTEAFVRLYKAGLLYRS 273


>gi|84394388|ref|ZP_00993107.1| leucyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84374990|gb|EAP91918.1| leucyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|254230581|ref|ZP_04923945.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151936897|gb|EDN55791.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 761

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|332299290|ref|YP_004441211.1| Isoleucyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176353|gb|AEE12043.1| Isoleucyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 1137

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +++       +L   + L +DG   KMSKR G+ +    ++ 
Sbjct: 650 GVDQTRGWFFTLHAIA-TMTQGSIAFRNVLVNGLVLDKDG--NKMSKRLGNAVDPFGIIQ 706

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   N  E + FD   V+E S++
Sbjct: 707 QYGSDPLRWYMITNANPWENIRFDPKGVEEVSRK 740


>gi|269965469|ref|ZP_06179588.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829948|gb|EEZ84178.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 857

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|227888795|ref|ZP_04006600.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850632|gb|EEJ60718.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 472

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 93/321 (28%), Gaps = 33/321 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V    Y+++     + +          
Sbjct: 29  CGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV---NYVSNFTDVDDKMINEAH----- 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
             +     L E Y            +        L+      +  + D+    + K    
Sbjct: 81  KEHTTVEKLAERYIKAFMEDTEALNIE----PATLHPRATHEIKEIIDFVQDLIDKGF-- 134

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A  +  D++     F           I  L       E I    +SK     D    
Sbjct: 135 ---AYEVDGDVYYRARKFPNYG-QLSDQNIAELEEG--ASEHINEEEQSKKEDPIDF--- 185

Query: 308 QLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
            L  ++    D++  D P  K    +      +       +   D  I + G        
Sbjct: 186 ALW-KAQKEEDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLEFP 238

Query: 366 RLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             E   A    K   +          +       KMSK   +F+T+  ++ ++    +RF
Sbjct: 239 HHENEIAQSEAKTGRKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQVLRF 298

Query: 425 MMLWRKNSELLDFDFCKVKEQ 445
            M   +    +++    +K+ 
Sbjct: 299 YMSSVQYRRPINYSEDGLKQA 319


>gi|159480322|ref|XP_001698233.1| hypothetical protein CHLREDRAFT_139213 [Chlamydomonas reinhardtii]
 gi|158273731|gb|EDO99518.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1177

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  ++ A+   K     L+C  + L  DG   KMSKR  ++     V+D
Sbjct: 584 GLDQTRGWFYTLMVLSTAL-FDKPAFKHLVCNGLVLAADGK--KMSKRLKNYPDPTEVLD 640

Query: 416 EVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIF 472
           + G+D++R  ++      +E L F    V    K+  +  Y  Y +   ++I R   +  
Sbjct: 641 KYGADALRLYLINSPVVRAETLRFKEEGVFAVVKDVFLPWYNAYRFL-VQNILRMEGESG 699

Query: 473 P 473
            
Sbjct: 700 A 700


>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 933

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A +      +VL    V    DG   KMSK  G+ ++  
Sbjct: 562 LYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVN---DGEGRKMSKSLGNTVSPE 618

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R         + +      VK+ S+         AY R R+  R    +
Sbjct: 619 DVIKVYGADILRLWCGSVDYRDDVRISDNIVKQMSE---------AYRRIRNTAR--YIL 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               DF+     V  ++   +  +  L   L    R +  +    E
Sbjct: 668 GNSYDFNPKTDKVAYKDM-LEIDKWAL-NKLEVLKRSVTESYDKYE 711


>gi|24372757|ref|NP_716799.1| leucyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|32171553|sp|Q8EHP4|SYL_SHEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24346832|gb|AAN54244.1|AE015561_4 leucyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 859

 Score = 40.3 bits (93), Expect = 0.93,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWHDTKTFEVTEDQNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|260767783|ref|ZP_05876718.1| glutamyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617292|gb|EEX42476.1| glutamyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 475

 Score = 40.3 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 96/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y          E+ ++         E+K       Y+ + ++  IR +
Sbjct: 61  MTWLGLDWDEGPYYQTKRFDRYNEVVEQL------LAEDKAYKC---YAPKDLLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D    +   ++  A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDADHPKIKAVNEAAKEGDPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DGS TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDVDMGITHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|182624277|ref|ZP_02952062.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910495|gb|EDT72868.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 514

 Score = 40.3 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 37/339 (10%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+G     + GD LA      G EV      +  G+ +   A  +    ++ +
Sbjct: 10  PYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPVLNKAKEINKSPEELI 69

Query: 190 YNNDSDL----------------PEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWL 230
                +                  +  Y    +K++ K L +K   Y  E   F   K  
Sbjct: 70  NKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYCPKCC 129

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEG 289
             + ++ ++  +    +    +   +++F     F       I++I+D     +    + 
Sbjct: 130 DTLDEFGIKEGLCNECNSKVEVRSSNNLFFKLSYFQ----DYIQNILDEEESWRENAIKI 185

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
                +     K             + G +  R  +  D    Y  A     + K     
Sbjct: 186 TKRYLEGGLRDKILTREINWGIEVPVEGFEDKRVYVWIDALLAYVTASKIVIEEKGQSLE 245

Query: 345 -YERGFDNMIYVM-GSDHSG-YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401
            Y    ++ IY++ G ++   +     A+ + +  +K++I +   + + L         S
Sbjct: 246 EYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLTL----EGKTFS 301

Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-LLDFDF 439
                 I + ++++    DS+R+ ++ R   E   DF +
Sbjct: 302 TNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTW 340


>gi|91228820|ref|ZP_01262727.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187625|gb|EAS73950.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 857

 Score = 40.3 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|91977051|ref|YP_569710.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683507|gb|ABE39809.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 968

 Score = 40.3 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +            V +  LV   RD    KMSK  G+
Sbjct: 546 TGFD-IIFFW-------VARMMMMGLHFKNDVPFPTVYIHALV---RDEKGAKMSKSKGN 594

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   H++D+ G+D++RF +
Sbjct: 595 VIDPLHLIDDYGADALRFTL 614


>gi|315038057|ref|YP_004031625.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276190|gb|ADQ58830.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 927

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 93/273 (34%), Gaps = 50/273 (18%)

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGDPSPIRD 275
           L    + +++P      +  M+K  R D      +A  +   IF +ED      P  I  
Sbjct: 423 LDQIDKAEFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEH 481

Query: 276 IIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           I     ++G            + +G             + D   + F S   G      +
Sbjct: 482 IAKIFEKEGSNAWYTHTAKELLPDGFTSEHSPNGEFTKEKDILDVWFDS---GSSWSGVM 538

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
            K DG   +F ADL               Y+ GSD   G+       + AV+ K     V
Sbjct: 539 EKRDG--LHFPADL---------------YLEGSDQYRGWFNSSLITSVAVTGKAPYKEV 581

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           L    V    D    KMSK  G+ I+   V+  +G++ +R  +     +  +      ++
Sbjct: 582 LSQGFV---LDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQADTTSDVAVSMGILQ 638

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           + ++         +Y + R+ FR       D D
Sbjct: 639 QSAE---------SYRKIRNTFRYMLANTSDFD 662


>gi|302794101|ref|XP_002978815.1| hypothetical protein SELMODRAFT_443981 [Selaginella moellendorffii]
 gi|300153624|gb|EFJ20262.1| hypothetical protein SELMODRAFT_443981 [Selaginella moellendorffii]
          Length = 1031

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 11/84 (13%)

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             +  +DP ++       G+     +P+ ++    S   +   +G +      K  +   
Sbjct: 3   AEKKPLDPTME------PGY-----NPADVQAGWYSWWEACGFFGADAASTEPKFVMVLP 51

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS 152
             N TG +H+GH     V D L  
Sbjct: 52  PPNVTGHLHLGHALTVSVQDALVR 75


>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 477

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 102/330 (30%), Gaps = 50/330 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  D +    A  GY+V       D   +I   A       +   + + SD 
Sbjct: 37  HIGNARPFVTWDVIRRYFAKKGYKVHYIQNFTDVDDKIINAA-----NKEGVTWKDISDR 91

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
               Y    +  +    AD Y       PE           +  + K+I      +    
Sbjct: 92  YIKAYFEA-MDALNVRHADVYPRVSETMPE----------IIAMVQKLIDKGYAYVIDNG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D++ S + F        R + D       +  G      +      D     L   +   
Sbjct: 141 DVYYSVEKFSHYGKLSGRSLDD-------MQAGARIEVNTAKHHPMDF---ALWKAAKPG 190

Query: 317 GDDVDRPLLKSDGSYTY--FAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEA 369
               D P  K    +        L Y   K++          GSD     H   + + +A
Sbjct: 191 EPSWDSPWGKGRPGWHIECSTMSLKYLGKKFDFHGG------GSDLIFPHHENEIAQSQA 244

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
               + +  +     L        +    KMSK   +F T++ ++ E   + +RF +L  
Sbjct: 245 C---IGDDHSFAQYWLHNGFITIHN---EKMSKSKNNFFTVKDILKEYPGEVIRFFILQT 298

Query: 430 KNSELLDFDFCKVKEQSK-----ENPVFYV 454
                LDF   ++KE        +N   YV
Sbjct: 299 HYRSPLDFSDERLKEAQTSLGRLQNTKAYV 328


>gi|254473549|ref|ZP_05086945.1| isoleucyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957261|gb|EEA92465.1| isoleucyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 977

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 66/198 (33%), Gaps = 19/198 (9%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L K L   +    +  R+      K  +        G +H+GH     + D +   M
Sbjct: 31  PKILAKWLDKDL---YKVMRDQSAGRPKFILHDGPPYANGNIHIGHALNKTLKDIINRSM 87

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++     Y+         +   +  +Y++   N D+ +P   +             
Sbjct: 88  QMQGFDA---NYVPGWDCHGLPIEWKIEEQYRKKGKNKDA-VPINEFRKE---------C 134

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQA-MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +++ + ++   E++  +  +       + +  D    +  +   F +    +RG    +
Sbjct: 135 REFADKWIDVQREEFKRLGIEGDWDNPYLTMRYDSEAVIANELMKFATSGQLYRGSKPVM 194

Query: 274 RDIIDN--LARQGYVYEG 289
             I++   LA     YE 
Sbjct: 195 WSIVEKTALAEAEVEYED 212


>gi|195491011|ref|XP_002093382.1| GE21273 [Drosophila yakuba]
 gi|194179483|gb|EDW93094.1| GE21273 [Drosophila yakuba]
          Length = 994

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 52/172 (30%), Gaps = 11/172 (6%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    + +        K     +     N TG +H+GH   A V D +A      G
Sbjct: 51  AYWEREERQANLPKASASSCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQREQLG 110

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V       D     +   ++     ++ +  + +   +      +L  V +  A+K +
Sbjct: 111 YQV-------DWVPGTDHAGIATQVVVERTIAASQAKTRQELGRSAFLDEVWRWKAEKGA 163

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
             + +          K    +    +      A+N+  +    E    R + 
Sbjct: 164 GIVQDL----RQLGCKLNWQREYFTMDEQQAHAVNVAFERLFDEGLIQRRNS 211


>gi|194466707|ref|ZP_03072694.1| leucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453743|gb|EDX42640.1| leucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 806

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 528 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 587

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 588 NPDDIVDQYGADTLR 602


>gi|148544519|ref|YP_001271889.1| leucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153883|ref|YP_001842224.1| leucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363053|ref|ZP_03847189.1| leucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682840|ref|ZP_08162356.1| leucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980078|sp|A5VL28|SYL_LACRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229470716|sp|B2G8G2|SYL_LACRJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148531553|gb|ABQ83552.1| leucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225227|dbj|BAG25744.1| leucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071874|gb|EEI10161.1| leucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977190|gb|EGC14141.1| leucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 806

 Score = 40.3 bits (93), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 528 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVV 587

Query: 409 TLRHVVDEVGSDSVR 423
               +VD+ G+D++R
Sbjct: 588 NPDDIVDQYGADTLR 602


>gi|326388332|ref|ZP_08209928.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207064|gb|EGD57885.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 954

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 30/161 (18%)

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           D   I         Q    EG++                 L   +T+   D D PLL   
Sbjct: 505 DKGGIYVAETEEEAQALAGEGVVLSRDEDVLDTWFSS--ALWPFATLGWPDEDAPLLAR- 561

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLL 385
                      Y       GFD +++   +       +          V  ++  ++   
Sbjct: 562 ----------HYPNDLLVSGFD-ILFFWCARMAMQGLHF------MKEVPWRRLYLH--- 601

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
                L R     KMSK  G+ +    ++D+ G+D++RF M
Sbjct: 602 ----GLVRAADGQKMSKSKGNVVDPLGLIDKYGADALRFFM 638


>gi|322389048|ref|ZP_08062615.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144247|gb|EFX39658.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 663

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 108/334 (32%), Gaps = 47/334 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------- 178
           P+G +H+G     +  D LA       Y+V     +++ G +I   A             
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDG 73

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDY 236
           ++V  +    L +   D         + K V +      + + +   E      V  +++
Sbjct: 74  MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 133

Query: 237 SVQAMMKIIRDDLKALNI-------QHDIFISEDDFHRGDPSPIRDIIDNLARQGYV--- 286
             ++ +  +  D     I           ++SE+ +          +++    Q      
Sbjct: 134 FTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 193

Query: 287 ---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343
                 +L        +   + R    +   +  +      +  D    Y  A L Y + 
Sbjct: 194 DGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLNYVTA-LGYGQE 252

Query: 344 KYERGFDNMIY-----VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394
            +E  FD         ++G D    HS Y      +   +  K  +  +     V   +D
Sbjct: 253 DHE-NFDKFWNGTVFHMVGKDILRFHSIY---WPILLMMLDIKLPERLIAHGWFVM--KD 306

Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           G   KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 307 G---KMSKSKGNVIYPEMLVERFGLDPLRYYLMR 337


>gi|315186109|gb|EFU19871.1| cysteinyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 470

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 88/310 (28%), Gaps = 31/310 (10%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  +  D L   +  +GY +     + D G                     D  +
Sbjct: 38  HIGNLRTYIFEDVLRRTLLHAGYRLVHVMNVTDVG-----------HLTSDGDEGEDKVI 86

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                 G+ +  + +     +  +      ++   + K       M  +   L+     H
Sbjct: 87  KAARERGMSVWEIAEFFTKAFFEDTDKLNIQRPEIVCKATEHIPEMIDLVKRLEERG--H 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                 + ++     P    +  L  Q                 K       L F  +  
Sbjct: 145 TYLAGGNVYYDISTFPRYGELARLDEQDL----RAGARVGVDAHKRSPRDFVLWFTRSKF 200

Query: 317 GDDV---DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG-YVKRLEAVAA 372
                  D P  K  G   +     A         FD  I+  G DH   +     A + 
Sbjct: 201 EHQAMVWDSPWGK--GYPGWHLECSAMSMKYLGEQFD--IHCGGVDHIPVHHTNEIAQSE 256

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV--RFMMLWRK 430
             + +   +   L     +   G   KMSK  G+F+TL  + +E G   +  R+  L   
Sbjct: 257 GATGRHPWVRYWLHAEFLVMDSG---KMSKSKGNFLTLSSLEEE-GFHPLDYRYFCLGAH 312

Query: 431 NSELLDFDFC 440
               L F + 
Sbjct: 313 YRSQLFFSWE 322


>gi|262190523|ref|ZP_06048767.1| leucyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262033596|gb|EEY52090.1| leucyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|167044646|gb|ABZ09318.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG7F19]
          Length = 551

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 53/189 (28%), Gaps = 52/189 (27%)

Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVV-GDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
            +K  I        G +H+GH     +  D     +   G E       +D G  I  L 
Sbjct: 2   NSKAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPI--LI 59

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
            S            +   PE Y                                     V
Sbjct: 60  QS----------EKEGKTPEEY-------------------------------------V 72

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
           +   K   +D  A NI+ D F         +   ++D+   L + G++Y+  +      T
Sbjct: 73  EYWNKRDFEDFVAFNIKFDFFYKTSS--PENRQFVQDVFKKLEQAGHIYQNEIIQLYCNT 130

Query: 299 TQKCDMDRK 307
            +K   DR 
Sbjct: 131 DKKFLPDRY 139


>gi|262168630|ref|ZP_06036325.1| leucyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|189083213|sp|A5F2X0|SYL_VIBC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|262022748|gb|EEY41454.1| leucyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|169333987|ref|ZP_02861180.1| hypothetical protein ANASTE_00379 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258704|gb|EDS72670.1| hypothetical protein ANASTE_00379 [Anaerofustis stercorihominis DSM
           17244]
          Length = 490

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 29/217 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          GD L  +      +  R  Y+  +   +     
Sbjct: 8   APSPTGFLHIGGLRTALYCYLWAKHNDGDYLLRI-----EDTDRTRYVEGSVENLINALN 62

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               ++ +     D  + E    G Y +    ++  KY ++LL+  +  +        ++
Sbjct: 63  FCGVKHDEGPMLKDGKVVEVGEKGPYFQSDRLDIYKKYINKLLDEGK-AYYCFCDKDRLE 121

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
            + +    + +    ++D      +  R +        +   + G  Y   +  P+ +  
Sbjct: 122 TLREEQIKNKQT--PKYDGKC--KNLSREEA-------EEKIKNGESYVIRMALPEDEDI 170

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
              D  R ++   +  V +   + L+K+DG  TY  A
Sbjct: 171 TFEDEVRGKVTINTKDVDE---QVLIKTDGFPTYHFA 204


>gi|28897501|ref|NP_797106.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839855|ref|ZP_01992522.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|31077000|sp|Q87RQ0|SYL_VIBPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28805713|dbj|BAC58990.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746627|gb|EDM57615.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 857

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|255744739|ref|ZP_05418690.1| leucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161127|ref|ZP_06030238.1| leucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|14285779|sp|Q9KTE6|SYL_VIBCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|255737770|gb|EET93164.1| leucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262028877|gb|EEY47530.1| leucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|327483681|gb|AEA78088.1| Leucyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|77411392|ref|ZP_00787739.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162565|gb|EAO73529.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 665

 Score = 40.3 bits (93), Expect = 0.96,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G   + K   ELL+   +K++     Y  +A+ KI    L  
Sbjct: 66  -------GITPQEYVD--GMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G +  G+ P       +   +  + 
Sbjct: 117 GDIYLGEYTGWYSVSDEEFFTESQLAEVYRD--ENGNMIGGVAPS----GHEVEKVSEES 170

Query: 309 LLFRSTMVGDDV------DRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
             FR +   D +          ++ DG               DLA  +  Y  G      
Sbjct: 171 YFFRMSKYADRLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSN 230

Query: 349 FDNMIYV---------------MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             ++IYV                  D S Y K   A    + +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMAL 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DLPLPKRLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 339


>gi|313887291|ref|ZP_07820982.1| isoleucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923210|gb|EFR34028.1| isoleucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 1137

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  +++       +L   + L +DG   KMSKR G+ +    ++ 
Sbjct: 650 GVDQTRGWFFTLHAIA-TMTQGSIAFRNVLVNGLVLDKDG--NKMSKRLGNAVDPFGIIQ 706

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   N  E + FD   V+E S++
Sbjct: 707 QYGSDPLRWYMITNANPWENIRFDPKGVEEVSRK 740


>gi|262394986|ref|YP_003286840.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338580|gb|ACY52375.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 857

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|260898991|ref|ZP_05907432.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308087477|gb|EFO37172.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 820

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|260878357|ref|ZP_05890712.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308090259|gb|EFO39954.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 790

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +         +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQKHWDDNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|258625263|ref|ZP_05720171.1| Glutamyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582436|gb|EEW07277.1| Glutamyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 513

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 47  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 99

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 100 MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 150

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 151 QEA----------NKEMPRYDANHPKIKAVNEAAKEGEPCCIRFRNPKEGSVVFDDQIRG 200

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 201 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 252

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 253 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 287


>gi|163747198|ref|ZP_02154553.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379473|gb|EDQ03887.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 977

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 42/236 (17%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV ++K    V +  LV   RD    KMSK  G+
Sbjct: 582 TGFD-IIFFW-------VARMMMMQYAVVDQKPFDTVYVHALV---RDEKGKKMSKSLGN 630

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            +    ++D+ G+D+VRF +         L     ++          +  + +A   ++F
Sbjct: 631 VLDPLELIDDYGADAVRFTLTSMAAMGRDLKLSTQRIAGYRNFGTKLWNAHRFAEMNNVF 690

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK---LA 522
                  P     L    V       +  +  L      +      A  A   +    + 
Sbjct: 691 DSMPAAMPQPQATLNKWIVGETARIREEVDAALGNF--RFND----AANALYAFVWGKVC 744

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV-ASIINSGLNII 577
            +  +L+                  +Q +  +    R     A  A ++   L ++
Sbjct: 745 DWYVELSK---------------PLLQDDAPEAAETR-----ATMAWVLEQCLVLL 780



 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 66/250 (26%), Gaps = 45/250 (18%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +I +     G         +    ++     N TG +H+GH     + D L   
Sbjct: 9   AAEAESRIYADWETKGAFKAGANAQRDEHFSVMIPPPNVTGSLHMGHAFNNTLQDILVRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G++   +   + AG     +                               V +EL
Sbjct: 69  HRMQGFDTLWQPGQDHAGIATQMV-------------------------------VEREL 97

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH------R 267
           A            E +   V +   ++   II D L+ L    D   +            
Sbjct: 98  AATGQPGRRELGREAFTAKVWEQKQKSGGTII-DQLRRLGASCDWSRNAFTMSGAPGAPE 156

Query: 268 GDPSPIRDIIDN----LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
           G+     D +      +  +G +Y G          +    D   L   ST V   +   
Sbjct: 157 GEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISD---LEVESTEVDGHMWHF 213

Query: 324 LLKSDGSYTY 333
                G  TY
Sbjct: 214 KYPLAGGATY 223


>gi|119385489|ref|YP_916545.1| leucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|189030294|sp|A1B5Q5|SYL_PARDP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119375256|gb|ABL70849.1| leucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 844

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + +          +  R +  +  K  +  +   P+G +H+GH R   +GD +A     
Sbjct: 6   AISEPRWQEAWEQADTFRAVRDERPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARFKRA 65

Query: 157 SGYEV 161
            G+ V
Sbjct: 66  QGFSV 70


>gi|292669612|ref|ZP_06603038.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648821|gb|EFF66793.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 823

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K                  K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 11  AKWQKIWETEHRCRTEEDDTKPKYYVLEMF-PYPSGKLHMGHVRNYSIGDVIARFRTMEG 69

Query: 159 YEV 161
           Y V
Sbjct: 70  YNV 72


>gi|162456513|ref|YP_001618880.1| hypothetical protein sce8230 [Sorangium cellulosum 'So ce 56']
 gi|161167095|emb|CAN98400.1| metS [Sorangium cellulosum 'So ce 56']
          Length = 641

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 397 PIKMSKRAGDFITLRHVVDEVG--SDSVRFMM-LWRKNSELLDFDFCKVKEQSKENPVFY 453
             KMSK  G+F T   ++DE G   D +R+ + L     +  DFDF K+ E++K      
Sbjct: 430 GEKMSKSRGNFFTGDQLLDEKGYSVDQIRYYLALLSLAEKPSDFDFEKLDERNKFLAGPM 489

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ--------LIVHLAEY 505
                    ++  +     P+    L  + V                     L+  +  Y
Sbjct: 490 NAAFERPISAVHSKFGGKVPE--GALLDKVVADTVRIVQRYVRAMDRADYPNLLFEIENY 547

Query: 506 PRVIENATIAQEPY 519
            R I +     +P+
Sbjct: 548 ARTINSLFTQYKPH 561


>gi|119486301|ref|ZP_01620360.1| Arginyl tRNA synthetase, anticodon binding [Lyngbya sp. PCC 8106]
 gi|119456514|gb|EAW37644.1| Arginyl tRNA synthetase, anticodon binding [Lyngbya sp. PCC 8106]
          Length = 278

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 45  LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI-AGK-GFINLYLSPSYLRKIL 102
             +  A+ L++    +PL IA  I+  +    +   + I     G I   L+   +   L
Sbjct: 43  YHSAIALKLAKIYNQNPLEIATKILQCLLSQSEWVEITIDVIPSGIIIFELTDQAVVAWL 102

Query: 103 SSIVV 107
             +  
Sbjct: 103 KQMTQ 107


>gi|15615843|ref|NP_244147.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|14285778|sp|Q9K7S8|SYL_BACHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10175904|dbj|BAB07000.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 806

 Score = 40.3 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           IY+ G++H+     Y +    V   +     +          +       KMSK  G+ +
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVV 585

Query: 409 TLRHVVDEVGSDSVR 423
               ++D  G+D++R
Sbjct: 586 NPDDIIDSHGADTLR 600


>gi|320583657|gb|EFW97870.1| Mitochondrial leucyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 850

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            L   +  +             +    KG   +       P+G +H+GH R   + D LA
Sbjct: 10  KLDTKWTTRWKKQGCSLNPRR-KVAPTKGKIYSTAMF-PYPSGILHMGHLRVYTIADVLA 67

Query: 152 SLMAFSGYEVT 162
                 GY V 
Sbjct: 68  RFYRMQGYNVI 78


>gi|320526965|ref|ZP_08028154.1| isoleucine--tRNA ligase [Solobacterium moorei F0204]
 gi|320132550|gb|EFW25091.1| isoleucine--tRNA ligase [Solobacterium moorei F0204]
          Length = 910

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 75/236 (31%), Gaps = 39/236 (16%)

Query: 260 ISEDDFHRGDPSPIRD----IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
           I E +        + +    +      +  + EG           + + D   + F S  
Sbjct: 473 IMEKEVFDHIAELMNEYGSNVWFEREAKDLLPEGYTNEKSPNGEFRKETDIMDVWFDS-- 530

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAV 374
            G   +  + + DG                    D  +Y  GSD   G+      V+ AV
Sbjct: 531 -GSSWNELIARGDGYP-----------------CD--LYFEGSDQYRGWFNSSLIVSTAV 570

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +       VL    V    D    KMSK  G+ +    ++++ G+D  R   +     E 
Sbjct: 571 NGTAPYKEVLSHGYVV---DSKGEKMSKSVGNVVNPMDIINQNGADVFRLWAMSSDFKED 627

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
           L      +K+ S +         Y + R+ FR         DF+     V  ++ E
Sbjct: 628 LKLGPSNIKQVSDQ---------YRKIRNTFRFLLGNVNGEDFNPSTDMVAFEDLE 674


>gi|319788017|ref|YP_004147492.1| valyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466529|gb|ADV28261.1| valyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 966

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 58/213 (27%), Gaps = 34/213 (15%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
            ++  ++ +    SG    R   G+G   +I     N TG +H+GH     + D L    
Sbjct: 11  KTFESRLYAEWETSGCFTPR---GEGKPYSILLPPPNVTGTLHMGHAFQHTLMDALVRFH 67

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++V  +   + AG     +         +    +                      
Sbjct: 68  RMDGHDVLWQMGTDHAGIATEMVVSRNLALEGKGETRDS--------------------- 106

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                       E ++  V ++   +    I   ++ L    D   S           + 
Sbjct: 107 ---------LGREGFIAKVWEWKATSG-DTIERQMRRLGASGDWSRSTFTMDPQPSEAVV 156

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +       +G +Y G          +    D +
Sbjct: 157 EAFVRWHEEGLIYRGQRLVNWDPVLKTAISDLE 189


>gi|311280454|ref|YP_003942685.1| leucyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749649|gb|ADO49401.1| leucyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 860

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESNVQQHWDEKRTFEVTEDNSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|262172034|ref|ZP_06039712.1| leucyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893110|gb|EEY39096.1| leucyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|258405532|ref|YP_003198274.1| glutamyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797759|gb|ACV68696.1| glutamyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 463

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 91/277 (32%), Gaps = 45/277 (16%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ-A 188
            +PTG +H+G  R A+    LA      G          DA    + +   +    +   
Sbjct: 10  PSPTGHLHIGGARTALFNWLLAR---HFGGRFVLRIEDTDAARSTDEMTEGILEGMRWLG 66

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L  ++    +     +Y +H+ + LA+  +      P+E          V+AM +  R  
Sbjct: 67  LDWDEGPYYQSQRTALYQEHIERLLAEDKAYYCQCTPDE----------VEAMREQARA- 115

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +    ++D    E +   G    +R                   P   +T   D  R  
Sbjct: 116 -RGDKPKYDGRCREKNLGPGPDRVVR----------------FKAPLGGSTSYMDAVRGA 158

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
               ++ + D +   + ++DGS TY    LA        G  +++   G DH     +  
Sbjct: 159 NAVDNSELDDFI---IRRADGSPTY---QLAVVVDDASMGITHILR--GDDHMSNTPKQV 210

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
            +  A+              V +       K+SKR G
Sbjct: 211 LLYEALGYPLPVFGH-----VPMILGPDKKKLSKRHG 242


>gi|161869318|ref|YP_001598485.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161594871|gb|ABX72531.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 914

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 45  PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 104

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 105 RLNGFNVM 112


>gi|154491530|ref|ZP_02031156.1| hypothetical protein PARMER_01141 [Parabacteroides merdae ATCC
           43184]
 gi|154088331|gb|EDN87376.1| hypothetical protein PARMER_01141 [Parabacteroides merdae ATCC
           43184]
          Length = 508

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 97/294 (32%), Gaps = 32/294 (10%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G ++     I D  +Q    
Sbjct: 1   MTQRKVRVRF-APSPTGALHIGGVRTALYNYLFA---KQNGGDLILR--IEDTDSQ--RF 52

Query: 178 ALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
                    +AL        E    G   G Y +   +++  KY  +LL+     ++   
Sbjct: 53  VPGAEAYIIEALTWLGIKFDEGVGFGGEYGPYRQSERRDIYKKYVDQLLDAG-CAYIAFD 111

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
               + A  K I               S     R   +   + + +L   G  Y   +  
Sbjct: 112 TPEELDAKRKEIP--------NFQYDASTRMQMRNSLTLSEEEVKSLIDAGNQYVVRVKI 163

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNM 352
              +     D+ R +++  S+++    D+ L KS D   TY    LA     +     ++
Sbjct: 164 EPDEDIHVNDLIRGEVIINSSILD---DKVLYKSADQLPTYH---LANIVDDHLMEVTHV 217

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           I   G +          +      +          L  L +     K+SKR GD
Sbjct: 218 IR--GEEWLPSAPLHVLLYRYFGWEDTMPR--FAHLALLLKPEGNGKLSKRDGD 267


>gi|20090469|ref|NP_616544.1| leucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|60390729|sp|Q8TQD3|SYL_METAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19915487|gb|AAM05024.1| leucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 961

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 10/161 (6%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                +     +    K  K  I        G +H GH R   +GD +A      GY V 
Sbjct: 14  WQKKWNESLIFQADPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGYNVL 73

Query: 163 --REYYINDAGAQINTLALSVFWRYQQAL--YNNDSDLPEGYYPG----VYLKHVGKELA 214
               +++   G  I  LA  +  R  Q +  Y +   +P    P       +    K  A
Sbjct: 74  YPMGFHV--TGTPIVGLAELIASRDPQTMDVYEHLHGIPGDILPTLDTPEKIVDYFKREA 131

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +K    +    + +      D + +  ++     L+   + 
Sbjct: 132 EKAMRMIGYSIDWRRKFTTTDPTYKKFIEWQYIRLEEKGLI 172


>gi|121998924|ref|YP_001003711.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166231613|sp|A1WYZ7|SYL_HALHL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121590329|gb|ABM62909.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 817

 Score = 40.3 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS----ANPTGPMHVGHCRCAVVGD 148
           +   Y  K + +   +  E  +    +      ++        P+G +H+GH R   +GD
Sbjct: 1   MDNQYQPKEIEAEAQAYWEQQQTFQAREDSARPKYYCLSMFPYPSGRLHMGHVRNYTIGD 60

Query: 149 TLASLMAFSGYEV 161
            ++      GY V
Sbjct: 61  VVSRYKRMQGYNV 73


>gi|262165198|ref|ZP_06032935.1| leucyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262024914|gb|EEY43582.1| leucyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 858

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|253995955|ref|YP_003048019.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982634|gb|ACT47492.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 813

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +   S   +   +         K     +   P+G +H+GH R   +GD L+      
Sbjct: 10  IEQSAQSYWEANQTFAATEQSDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHKMK 69

Query: 158 GYEVT 162
           G+ V 
Sbjct: 70  GFNVM 74


>gi|212636651|ref|YP_002313176.1| leucyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212558135|gb|ACJ30589.1| Leucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 865

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 12  TPSEIEAKVQQHWKDEKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARY 71

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 72  QRLQGKNV 79


>gi|205356771|ref|ZP_03223530.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345338|gb|EDZ31982.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 462

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 47/304 (15%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILP 292
           +   +  +K   +D++ALN+    F      +    + + D+I  LA+ G+VY  E  + 
Sbjct: 82  EEITEFYIKSYEEDMRALNVLDPDFKPRATHY---ITAMLDLIKKLAKDGFVYTLEDGIY 138

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDV------DRPLLKSD----------GSYTYFAA 336
              SK  +   +  + L    + + ++V      D  L K D          G   +   
Sbjct: 139 FDTSKDEKYLSLSNRNLEENISRLSNEVQKRNESDFVLWKFDENFYENEFGKGRPGWHTE 198

Query: 337 DLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +A     +E   D     I ++   H     +             ++  +      +  
Sbjct: 199 CVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCKR------KLANIWLHNGFVKI 252

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK   +   ++  + E   +++RF +L        ++    ++   K    FY
Sbjct: 253 DGE--KMSKSLNNSFFIKDALKEFMGEALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFY 310

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-----LQLIVHLAEYPRV 508
                       ++  D+    DFD+     I  E      E     L +   LA     
Sbjct: 311 ----------RLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSKALALLDDF 360

Query: 509 IENA 512
           I +A
Sbjct: 361 ISSA 364


>gi|189203223|ref|XP_001937947.1| valyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985046|gb|EDU50534.1| valyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1094

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 42/195 (21%), Gaps = 33/195 (16%)

Query: 96  SYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           S       +          +  +       I     N TG +H GH     + D L    
Sbjct: 143 SAWDAWWDAQGFFKPEFTEKGDVKSPGHFVIPIPPPNVTGKLHCGHALATSLQDVLIRWH 202

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    ++   +  R +     +                   E  
Sbjct: 203 RMKGYTTLYLPGCDHAGIATQSVVEKMLKRRENKTRYD--------LGRQKFLERTMEWK 254

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y   L +                         L+ +    D               + 
Sbjct: 255 EEYHQHLTH------------------------TLRRMGGSFDWTREAFTMDENLSKAVT 290

Query: 275 DIIDNLARQGYVYEG 289
           +    L   G +Y  
Sbjct: 291 ETFVRLHEDGLIYRS 305


>gi|194476636|ref|YP_002048815.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
 gi|171191643|gb|ACB42605.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
          Length = 878

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           ++  P+ + K   +   +   Y       G       +   P+G +H+GH R  V+ D +
Sbjct: 10  IHYQPAAIEKRWQNQWRNDRIYQTPQNSDGEAFYALSMFPYPSGKLHMGHVRNYVITDVI 69

Query: 151 ASLMAFSG 158
           A      G
Sbjct: 70  ARAQRMRG 77


>gi|94986050|ref|YP_605414.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94556331|gb|ABF46245.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 925

 Score = 40.3 bits (93), Expect = 0.99,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+E    A++ +     V+L     LY D    KMSK  G+ I    + DE G D+ 
Sbjct: 522 WVARMEMAGYALTGEAPFSTVMLHG---LYLDAKGQKMSKSKGNGIDPLELFDEYGVDAC 578

Query: 423 RFMMLW 428
           RF    
Sbjct: 579 RFAFTS 584


>gi|149911110|ref|ZP_01899737.1| leucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805860|gb|EDM65849.1| leucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 864

 Score = 40.3 bits (93), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   TPSSIEPQVQKHWQENKTFEVQNDETKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARF 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRMQGKNV 73


>gi|320104035|ref|YP_004179626.1| glutamyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751317|gb|ADV63077.1| glutamyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 489

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 94/280 (33%), Gaps = 29/280 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G +        D    +      +   ++  
Sbjct: 8   APSPTGFLHIGGVRTALFNWLFAR---SQGGQFILRIDDTDQSRNVEEAVRLILDGFRWI 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D     G   G Y +    +L  +    LL+        + KD+S +      +  
Sbjct: 65  GIDWDEGPEVGGPVGPYFQSQRGDLYQRALHHLLDQGL-----VYKDFSTEDERAADKAA 119

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A    +        F R    P    +     +G  Y      P  +T    D  + +
Sbjct: 120 AEARKQPYR-------FRRKPIDP--ATLAQFEAEGRPYALRFKVPLGRTLVLEDRIKGR 170

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRL 367
           +  R+  + D     + + DGS  Y   + A      E G  ++I     +H +    +L
Sbjct: 171 VEQRTDDLSDF---VVARPDGSPLY---NFASAVDDLEMGITHVIR--AEEHLTNTFSQL 222

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+  ++   +      V   + G  +K+SKR G  
Sbjct: 223 -LIFEALRGERPMPSFAHVPFV--AKPGSKVKLSKRDGAV 259


>gi|258621035|ref|ZP_05716069.1| Glutamyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586423|gb|EEW11138.1| Glutamyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 509

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 43  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 95

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 96  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 146

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 147 QEA----------NKEMPRYDANHPKIKAVNEAAKEGEPCCIRFRNPKEGSVVFDDQIRG 196

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 197 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 248

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 249 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 283


>gi|157878078|pdb|1H3N|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate
          Length = 820

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G    ++L G   K  +  +   P+G +H+GH +   +GD LA      G
Sbjct: 11  AKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQG 70

Query: 159 YEV 161
           YEV
Sbjct: 71  YEV 73


>gi|304437277|ref|ZP_07397237.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369769|gb|EFM23434.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 823

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K           +      K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 11  AKWQKIWETEHSCHTEMDATKPKYYALEMF-PYPSGKLHMGHVRNYSIGDVIARFRTMEG 69

Query: 159 YEV 161
           Y V
Sbjct: 70  YNV 72



 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +  ++   A  +   +   N+L   +V   +DG   KMSK  G+ ++   ++D  G+D+ 
Sbjct: 550 FFTKVLRDAGMLDFDEPFTNLLTQGMV--IKDGA--KMSKSLGNVVSPEEIIDRYGADTA 605

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
           R  +L+   +  +D D     +Q  E    ++     R   I  Q  +            
Sbjct: 606 RLFILF---AAPVDRDLDW-SDQGVEGAYRFLG----RVWRILGQFAETIKGAPASYDAA 657

Query: 483 NVIPQESEF 491
            +  +E+E 
Sbjct: 658 TLSTEETEL 666


>gi|78048563|ref|YP_364738.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|118595570|sp|Q3BR75|SYE_XANC5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|78036993|emb|CAJ24707.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 467

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 96/296 (32%), Gaps = 63/296 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  RE        Q    A+
Sbjct: 8   APSPTGYLHIGGARTALYCWLEARHRGGQFVLRI-----EDTDRE-----RSTQAAIDAI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +       L  ++  + +      Y + V ++L  +       +   + L  +++ ++ 
Sbjct: 58  -LEAMDWLGLGYDEGPIYQTQRIARY-QEVAEQLLAQ-GKAYYAYETREELDAMREAAMA 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              K           + +    E +  +R DP+ +                    P   T
Sbjct: 115 KQEK----------PRFNGAAREQNLPYRDDPNRV---------------IRFKNPIGGT 149

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ +  +   ++ +    D  + + DG  TY   + A     ++ G   +I   G 
Sbjct: 150 VVFEDLIKGCIEIANSELD---DMVIFRPDGFPTY---NFAVVVDDWDMGITEVIR--GD 201

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
           DH     R   +  A+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 202 DHINNTPRQINIYEALGAPVPRFAHM-----PMILDEQGAKLSKRTGAADVMQYKD 252


>gi|53803700|ref|YP_114671.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81681450|sp|Q605M7|SYI_METCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53757461|gb|AAU91752.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 939

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 36/228 (15%)

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFIS 261
            +  +  +     L    + +W+P      ++AM        I R     + I   +   
Sbjct: 425 FIAMDKGELRRQALEAIGQVQWIPDWGQARIEAMVGNRPDWCISRQRTWGVPIPLFVHKE 484

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
               H      I +I   +   G      L P +    +           R   +GD +D
Sbjct: 485 TGALHPDTDRLIEEIAKKIETAGIDAWFELDPAELLGAEAD---------RYGKIGDTLD 535

Query: 322 RPLLKSDGSYTYFA-----ADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVS 375
              +  D   T+ A      DLA+            +Y+ GSD   G+ +     + A+S
Sbjct: 536 ---VWFDSGVTHHAVLAQNPDLAFPAD---------LYLEGSDQHRGWFQSSLMTSVAMS 583

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            +     VL         D    KMSK  G+ +  + V+  +G+D +R
Sbjct: 584 GQAPYKAVLTHGF---TVDAEGKKMSKSRGNVVAPQKVMQTLGADVLR 628


>gi|320105765|ref|YP_004181355.1| valyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924286|gb|ADV81361.1| valyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 932

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 35/211 (16%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
           ++R+ L  +    +E       K   + +     N TG +H+GH                
Sbjct: 22  WVRERLFDVPAGSMESDTQEDPKKFTMLL--PPPNVTGRLHMGHMLN------------- 66

Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                           +++ L      R ++AL+   +D        +  + +  E    
Sbjct: 67  --------------QTEMDILTRWHRMRGERALWVPGTDHAGIATQMMVERQLASE---- 108

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
              +  +F  E+++  V ++  Q     I D ++ L    D             + +++ 
Sbjct: 109 -GKKREDFSREEFIGRVWEWKAQYG-GAITDQMRRLGASVDWSREYFTMDENLSAAVKEC 166

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              L  QG +Y G          Q    D +
Sbjct: 167 FVKLYEQGLIYRGAYIVNWDPVQQTAVSDLE 197


>gi|330921717|ref|XP_003299541.1| hypothetical protein PTT_10549 [Pyrenophora teres f. teres 0-1]
 gi|311326766|gb|EFQ92380.1| hypothetical protein PTT_10549 [Pyrenophora teres f. teres 0-1]
          Length = 1094

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 42/195 (21%), Gaps = 33/195 (16%)

Query: 96  SYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           S       +          +  +       I     N TG +H GH     + D L    
Sbjct: 143 SAWDAWWDAQGFFKPDFTEKGDVKGPGHFVIPIPPPNVTGKLHCGHALATSLQDVLIRWH 202

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GY        + AG    ++   +  R +     +                   E  
Sbjct: 203 RMRGYTTLYLPGCDHAGIATQSVVEKMLKRRENKTRYD--------LGRQKFLERTMEWK 254

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           ++Y   L +                         L+ +    D               + 
Sbjct: 255 EEYHQHLTH------------------------TLRRMGGSFDWTREAFTMDENLSKAVT 290

Query: 275 DIIDNLARQGYVYEG 289
           +    L   G +Y  
Sbjct: 291 ETFVRLHEDGLIYRS 305


>gi|212223287|ref|YP_002306523.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|226695265|sp|B6YST9|SYL_THEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212008244|gb|ACJ15626.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 967

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 60/204 (29%), Gaps = 29/204 (14%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N        +K      V   E  RN   K  K  I       +G +HVGH R   + D
Sbjct: 4   LNFKAIEEKWQKRWMEDRV--FEPDRNAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPD 61

Query: 149 TLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            +A      GY V     ++I   GA I  +A  +  R  + +           Y  VY 
Sbjct: 62  VIARFKRMQGYNVLFPMAWHI--TGAPIVGIAERIKNRDPKTI---------HIYRDVYK 110

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                         L  F + K   IVK +   A    IR      ++            
Sbjct: 111 VPE---------EILWKFEDPK--EIVKYFMKAARETFIR---AGFSVDWSREFHTTSLF 156

Query: 267 RGDPSPIRDIIDNLARQGYVYEGI 290
                 I      L   G V +G 
Sbjct: 157 PPFSKFIEWQFWTLKDMGLVVKGA 180


>gi|167586114|ref|ZP_02378502.1| leucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 864

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQRDWRAADAYKTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|146305988|ref|YP_001186453.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166229758|sp|A4XQV5|SYI_PSEMY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145574189|gb|ABP83721.1| Isoleucyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 943

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 79/258 (30%), Gaps = 37/258 (14%)

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFRSTMVGDD 319
           + H      + ++   + ++G      L   +    +  D D+      + F S      
Sbjct: 487 ELHPRTVELMEEVAKRVEQEGIEAWFKLDAAELLGAEAADYDKINDTLDVWFDS------ 540

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
                    G+  +           +  G    +Y+ GSD   G+        +A+ +  
Sbjct: 541 ---------GTTHWHVLR-GSHGLGHTTGPRADLYLEGSDQHRGWFHSSLLTGSAI-DGH 589

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           A    LL     +  +G   KMSK  G+ +  + V D +G        + R      D+ 
Sbjct: 590 APYKALLTHGFVVDENGR--KMSKSLGNVVAPQEVNDSLG------ADIMRLWVASTDYS 641

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
                 +        +Q +    R I   A+ +  +L+     ++++  E   D     +
Sbjct: 642 GEMAVSK------VILQRSADAYRRIRNTARFMLANLNGFDPAKDLLQPEQMLDLDRWAV 695

Query: 499 IVHLAEYPRVIENATIAQ 516
              L      I  A    
Sbjct: 696 DAAL-RLQEEIIEAYADY 712


>gi|78484840|ref|YP_390765.1| isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363126|gb|ABB41091.1| Isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 943

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 11/139 (7%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L    ++  +K  +D    L  +T++G+D D     +D    +F + +++F    +R  D
Sbjct: 499 LMEKVAQLVEKHSIDAWYDLDPTTLLGEDADEYEQVTDILDVWFDSGISHFTVLNQR--D 556

Query: 351 NM-----IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
            +     +Y+ GSD   G+ +     A A + +     VL         D    KMSK  
Sbjct: 557 ELSTPADLYLEGSDQHRGWFQSSLLTALATNGEAPYKQVLTHGF---TVDKDGKKMSKSK 613

Query: 405 GDFITLRHVVDEVGSDSVR 423
           G+ +  + + ++ G+D +R
Sbjct: 614 GNVVAPQDIANKYGADILR 632


>gi|55980130|ref|YP_143427.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|55771543|dbj|BAD69984.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 878

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G    ++L G   K  +  +   P+G +H+GH +   +GD LA      G
Sbjct: 11  AKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQG 70

Query: 159 YEV 161
           YEV
Sbjct: 71  YEV 73


>gi|46200127|ref|YP_005794.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|31615792|pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Pre-Transfer Editing Substrate Analogue In Both
           Synthetic Active Site And Editing Site
 gi|313507210|pdb|2BTE|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507211|pdb|2BTE|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507217|pdb|2BYT|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|313507218|pdb|2BYT|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|46197755|gb|AAS82167.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 878

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G    ++L G   K  +  +   P+G +H+GH +   +GD LA      G
Sbjct: 11  AKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQG 70

Query: 159 YEV 161
           YEV
Sbjct: 71  YEV 73


>gi|84684987|ref|ZP_01012886.1| glutamyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84666719|gb|EAQ13190.1| glutamyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 441

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 86/286 (30%), Gaps = 52/286 (18%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG+ R A+    +A     +G            G  I  L  +   R +Q 
Sbjct: 7   APSPTGYIHVGNLRTALFNYLIAR---KAG------------GTFILRLDDTDPERSKQE 51

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             +   +  E             +  D+Y+S      E+       +   +  +K  +  
Sbjct: 52  YADAIMEDLEWLGLTWDRVERQSDRLDRYNSAADELREKGRFYEAFETPTELDLKRKKQ- 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
              LN+              D                     L   +     +  +D ++
Sbjct: 111 ---LNMGKPPVYDRSALALSDDEK----------------AALRAERGDGVWRFKLDHER 151

Query: 309 LLFRSTMVGD-------DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
           + +   ++GD         D  L+++DG + Y    +A      + G  ++  V GSDH 
Sbjct: 152 IEWTDGILGDISIDAASVSDPVLIRADGQFLYT---MASVCDDIDFGITHV--VRGSDHV 206

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
                   +  A+                L        +SKR G  
Sbjct: 207 TNTATQIQIIQALGGNVPSFAHH-----SLLTGPQGEALSKRLGTL 247


>gi|67922817|ref|ZP_00516316.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67855310|gb|EAM50570.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 907

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 100/297 (33%), Gaps = 30/297 (10%)

Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282
           NF  ++W  + +D+ V+     I   L     Q   +    + +         I+ N   
Sbjct: 386 NFVPQRWKKVYRDWLVKLKDWCISRQLW-WGHQIPAWYVISETNGEITDNTPFIVANSEV 444

Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342
           +    E            + D D     F S +           S   +     DL  + 
Sbjct: 445 EAL--EKAKQEYGDNIKLEQDPDVLDTWFSSGL--------WPFSTLGWPENTEDLKTYY 494

Query: 343 --CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                  GFD +I+         V R+  +A   +++    +V +  LV   RD    KM
Sbjct: 495 PTSTLVTGFD-IIFFW-------VARMTMMAGYFTDEMPFKDVYIHGLV---RDENGKKM 543

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           SK A + I    ++D+ G+D++R+ ++        D      ++  +   V     +   
Sbjct: 544 SKTANNGIDPLILIDKYGTDALRYTLIRDVAGAGQDISLQYDRKTDQSESVEA---SRNF 600

Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
              ++  A+ +   L  +       P+  + +  +  +   L+ + + ++      E
Sbjct: 601 ANKLWNAARFVMMHLKGETPQSLGTPEIDKLELCDRWI---LSRFHQTVQQTKKQIE 654


>gi|302346352|ref|YP_003814650.1| isoleucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150916|gb|ADK97177.1| isoleucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 1221

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSK  G+      +++
Sbjct: 737 GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMSKHVGNVTNPFEMMN 793

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           + G+D VRF M+      + L FD   V E
Sbjct: 794 KYGADPVRFYMMTNSEPWDNLKFDPEGVDE 823


>gi|224419178|ref|ZP_03657184.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 650

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 348 GFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G+   +Y+ GSD   G+      V+ AV+EK     ++         D    KMSK  G+
Sbjct: 565 GYPASLYLEGSDQHRGWFHSSLLVSCAVNEKAPYKAIVTHGFTM---DEKGEKMSKSKGN 621

Query: 407 FITLRHVVDEVGSDSVR 423
            +  + V+ E GS+ +R
Sbjct: 622 VVVPKEVLKEFGSEILR 638


>gi|205355816|ref|ZP_03222585.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346250|gb|EDZ32884.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 917

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESTPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIR------ 668

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
                  F    I    + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 669 -------FLLANINDLKDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|157884158|pdb|2V0G|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site.
 gi|157884159|pdb|2V0G|D Chain D, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site
          Length = 877

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G    ++L G   K  +  +   P+G +H+GH +   +GD LA      G
Sbjct: 11  AKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQG 70

Query: 159 YEV 161
           YEV
Sbjct: 71  YEV 73


>gi|171849151|pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate In The
           Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3-
           Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The
           Editing Site
          Length = 878

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G    ++L G   K  +  +   P+G +H+GH +   +GD LA      G
Sbjct: 11  AKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQG 70

Query: 159 YEV 161
           YEV
Sbjct: 71  YEV 73


>gi|302873260|ref|YP_003841893.1| isoleucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688573|ref|ZP_07631019.1| isoleucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576117|gb|ADL50129.1| isoleucyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 1035

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-FDFCKVKE 444
           C ++    D   +KMSK  G+ +    V+D VG+D+ R+         L   F    V E
Sbjct: 576 CIVLGHVLDKKGLKMSKSKGNVVAPNDVLDTVGADATRWHFYTSSAPWLPTRFSKEDVAE 635

Query: 445 QSKEN-------PVFYVQYAYA 459
             ++          FYV YA  
Sbjct: 636 TQRKFLSTLWNVYSFYVLYADL 657


>gi|238853164|ref|ZP_04643551.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834218|gb|EEQ26468.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 472

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 97/323 (30%), Gaps = 37/323 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +  DT+     + GY+V       D   ++            +
Sbjct: 29  CGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDVKYVSNFTDVDDKM--------INEAR 80

Query: 188 ALYNNDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
             +    +L + Y        + +  E A  +        E      + D+    + K  
Sbjct: 81  KEHTTVGELADRYIKAFMEDTEALNIEPATLHPRATHEIQE------IIDFVQDLIDKGF 134

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                A  +  D++     F           I  L       E I    +SK     D  
Sbjct: 135 -----AYEVDGDVYYRAKKFPNYG-QLSDQNIAELEEG--ASEHINEEEQSKKEDPIDF- 185

Query: 306 RKQLLFRSTMVGDDV--DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
              L  ++    D++  D P  K    +      +       +   D  I + G      
Sbjct: 186 --ALW-KAQKEDDEIAWDSPWGKGRPGWH-----IECSVMSTKYLGDT-IDIHGGGQDLE 236

Query: 364 VKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
               E  +A + ++   +          +       KMSK   +F+T+  ++ ++    +
Sbjct: 237 FPHHENEIAQSEAKTGKKFVNYWMHNGFVTVGKKKEKMSKSLHNFVTVHDILKQIDPQVL 296

Query: 423 RFMMLWRKNSELLDFDFCKVKEQ 445
           RF M   +    +++    +K+ 
Sbjct: 297 RFYMSSVQYRRPINYSEDGLKQA 319


>gi|169830060|ref|YP_001700218.1| glutamyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688166|sp|B1HNM5|SYE_LYSSC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|168994548|gb|ACA42088.1| Glutamyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 486

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 98/292 (33%), Gaps = 47/292 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +                  +Q++ L  
Sbjct: 10  APSPTGFLHIGGARTALFNYLYAKHHNGKFIVRIED----TDIERNVEGGEASQLDNL-- 63

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
               ++    Y+   D+   Y P  Y +    ++  +++ +LL           K +   
Sbjct: 64  ----KWLGIEYDESIDIGGPYAP--YRQMERLDIYKEHAEKLLAQG-----AAYKCFCSS 112

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R++ KA  +    +         +              G  Y   +  P++ T 
Sbjct: 113 EKLEASREEQKARGVAAPTYDGTCRHLSAEEVA------AKEAAGEPYTIRMRVPENVTY 166

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GS 358
              D+ R Q+ F S  +GD     ++K++G  TY       +    +  F  + +V  G 
Sbjct: 167 DFEDLVRGQVTFESKDIGDW---VIVKANGIPTYN------YAVVLDDHFMEISHVFRGE 217

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +H     +   +  A   +  +   +      L  +    K+SKR    I  
Sbjct: 218 EHLSNTPKQMMIFDAFGWEYPRFGHM-----TLIINENRKKLSKRDESIIQF 264


>gi|148242287|ref|YP_001227444.1| leucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|189083177|sp|A5GT82|SYL_SYNR3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147850597|emb|CAK28091.1| Leucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 864

 Score = 40.3 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            ++    + +           +       F    P+G +H+GH R  V+ D +A LM   
Sbjct: 17  WQQRWQEMGLDQTPEPSAERAENFYALSMF--PYPSGNLHMGHVRNYVITDVIARLMRLK 74

Query: 158 G 158
           G
Sbjct: 75  G 75


>gi|256851598|ref|ZP_05556987.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661023|ref|ZP_05861938.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282932387|ref|ZP_06337818.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256616660|gb|EEU21848.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548745|gb|EEX24720.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303501|gb|EFA95672.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRA 404
           +Y+ G++H+     Y +    V   +     +         RLY  G+      KMSK  
Sbjct: 524 LYIGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQRLYNQGLILKDHDKMSKSK 578

Query: 405 GDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           G+ +    V++E G+DS+R + M        +D+D
Sbjct: 579 GNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|228991196|ref|ZP_04151154.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228768420|gb|EEM17025.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 1033

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 12/130 (9%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AVAA  + K     VL    V    D    KMSK  G+ +    +V+
Sbjct: 550 GVDQTRGWFYSLLAVAALYTGKVPYKRVLSLGHV---LDEQGQKMSKSKGNALDPVELVE 606

Query: 416 EVGSDSVRFMML--------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           + G+D++R+ +L         R +   +     K+ +       FYV Y      +   +
Sbjct: 607 KFGADALRWALLVDSAPWNAKRFSERTVQEAKSKLVDTLVNVYSFYVLYTNLDKYNPKEK 666

Query: 468 AKDIFPDLDF 477
            +     LD 
Sbjct: 667 YEVKRTKLDE 676


>gi|228997294|ref|ZP_04156916.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|229004919|ref|ZP_04162646.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228756267|gb|EEM05585.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228762386|gb|EEM11311.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 1033

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 12/130 (9%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AVAA  + K     VL    V    D    KMSK  G+ +    +V+
Sbjct: 550 GVDQTRGWFYSLLAVAALYTGKVPYKRVLSLGHV---LDEQGQKMSKSKGNALDPVELVE 606

Query: 416 EVGSDSVRFMML--------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467
           + G+D++R+ +L         R +   +     K+ +       FYV Y      +   +
Sbjct: 607 KFGADALRWALLVDSAPWNAKRFSERTVQEAKSKLVDTLVNVYSFYVLYTNLDKYNPKEK 666

Query: 468 AKDIFPDLDF 477
            +     LD 
Sbjct: 667 YEVKRTKLDE 676


>gi|297206419|ref|ZP_06923814.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149545|gb|EFH29843.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 804

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRA 404
           +Y+ G++H+     Y +    V   +     +         RLY  G+      KMSK  
Sbjct: 524 LYIGGAEHAVRHLLYARFWHKVLYDLGVVPTK-----EPFQRLYNQGLILKDHDKMSKSK 578

Query: 405 GDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
           G+ +    V++E G+DS+R + M        +D+D
Sbjct: 579 GNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|167465214|ref|ZP_02330303.1| glutamyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 445

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 76/247 (30%), Gaps = 53/247 (21%)

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+ +     D  R  + F S  +GD +   +++ DG  TY   + A     +    + +I
Sbjct: 121 PRGRVIAFDDRVRGHVEFESDGIGDFI---IVRPDGIPTY---NFAVILDDHLMKINLVI 174

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
              G +H     R   +  A+     +        + L  +    KMSKR    I     
Sbjct: 175 R--GEEHLTNTPRQIMMYEALGLTVPEFAH-----LSLILNQDRKKMSKRDESIIQFAEQ 227

Query: 414 VDEVG--------------------------SDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
             E+G                           + +R   L R       FD  K+   + 
Sbjct: 228 YKELGYLPEAVMNFIALLGWSPQGEEEIFTKEELIRQFDLDRVAKSPSVFDMDKLNWMNN 287

Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507
               +Y++ A  +     R A    P L         + +E +    +L     +A Y  
Sbjct: 288 ----YYIKKADLK-----RIAGLALPHLQKAGRLPEKLTEEQQKWAEDL-----IALYQE 333

Query: 508 VIENATI 514
            +  A  
Sbjct: 334 QLTYAAE 340


>gi|149186074|ref|ZP_01864388.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830105|gb|EDL48542.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 482

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 107/317 (33%), Gaps = 41/317 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  D L   +++ GY++T    I D G                A    D   
Sbjct: 41  HIGNMRAYVFADVLGRTLSWKGYDLTHIINITDVG-----------HLTDDADEGEDKME 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +  + K   + Y +++           ++  +  ++     D++    I+ 
Sbjct: 90  KMAAEKAQSIWDIAKHYTEAYWADVKALN-------IRQPAKWSVATHYIDEM----IEF 138

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRST 314
              I++   +  +     D +  +   G +   +    + +              ++R T
Sbjct: 139 AKGIADKHCYELESGLYFD-VSTIEDYGKLARAVTEDGEGRIDTVEGKRNAADFAIWRKT 197

Query: 315 MVGD----DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GY---VK 365
             G+    + D P  K    +    + +      +   FD  I+  G DH    +   + 
Sbjct: 198 PAGETRQMEWDSPWGKGAPGWHLECSVMGGKLLGF--PFD--IHTGGIDHREIHHPNEIA 253

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD--SVR 423
           + +A         A+ +     +   +      KMSK AG+F+ L+ ++D+ G    + R
Sbjct: 254 QNQAHCCTNGLDVAENSGARIWMHNNFLVERSGKMSKSAGEFLRLQLLIDK-GYHPLAYR 312

Query: 424 FMMLWRKNSELLDFDFC 440
            M L       L+F + 
Sbjct: 313 MMCLQAHYRSELEFSWE 329


>gi|55378085|ref|YP_135935.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68052897|sp|Q5V2M3|SYC_HALMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55230810|gb|AAV46229.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 492

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 111/360 (30%), Gaps = 60/360 (16%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           E           V + +     + P H+GH R  V  D +A  + + GY+V     + D 
Sbjct: 12  EKEPFEPRDPDSVLLYYCGLTTSDPPHLGHARGWVHVDVMARWLDYLGYDVHHVENLTDV 71

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEK 228
             +I             A    D         G     V +    +   ++  LN    +
Sbjct: 72  NEKIV------------ARVGED---------GDSEADVARHYVQQAIDDMRSLNLGRAE 110

Query: 229 WLPIVKDYSVQAMMKIIRDD-----LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
             P V ++  + +  + R        +     +    S +D+ +     + DI      Q
Sbjct: 111 VYPRVSEHVPEIIDLVERLIEQGHAYEQNGSVYFDVTSFEDYGKLSNQSVDDI----ESQ 166

Query: 284 GYVYEGILPPP------KSKTTQKCDM-----DRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           G   EG    P      K+      D+             +       D P    +G   
Sbjct: 167 GADTEGEKRHPADFALWKAGGVDPADIAEHQHPEAAPAEEACQTAQIWDSPW--GEGRPG 224

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCE 387
           +     A      +   D  I+V G D     H   V + EA        K   N  L  
Sbjct: 225 WHIECSAMSMTHLDESID--IHVGGQDLVFPHHENEVAQSEAA-----TGKQFANYWLH- 276

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447
            VRL  +    KMS   G++ T+   V+E G D +R  +L    +    +    + E  +
Sbjct: 277 -VRLL-ETEEEKMSSSLGNYFTVADAVEEFGPDVLRTFLLSTAYTSRATYSDETIAEAKE 334


>gi|57237647|ref|YP_178895.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|121612326|ref|YP_001000491.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005427|ref|ZP_02271185.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|61216114|sp|Q5HUZ0|SYC_CAMJR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200143|sp|A1VZF0|SYC_CAMJJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57166451|gb|AAW35230.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|87249406|gb|EAQ72366.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315058256|gb|ADT72585.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 462

 Score = 40.3 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 47/304 (15%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILP 292
           +   +  +K   +D++ALN+    F      +    + + D+I  LA+ G+VY  E  + 
Sbjct: 82  EEITEFYIKSYEEDMRALNVLDPDFKPRATHY---ITAMLDLIKKLAKDGFVYTLEDGIY 138

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDV------DRPLLKSD----------GSYTYFAA 336
              SK  +   +  + L    + + ++V      D  L K D          G   +   
Sbjct: 139 FDTSKDEKYLSLSNRNLEENISRLSNEVQKRNESDFVLWKFDENFYENEFGKGRPGWHTE 198

Query: 337 DLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +A     +E   D     I ++   H     +             ++  +      +  
Sbjct: 199 CVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCKR------KLANIWLHNGFVKI 252

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK   +   ++  + E   +++RF +L        ++    ++   K    FY
Sbjct: 253 DGE--KMSKSLNNSFFIKDALKEFMGEALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFY 310

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-----LQLIVHLAEYPRV 508
                       ++  D+    DFD+     I  E      E     L +   LA     
Sbjct: 311 ----------RLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSKALALLDDF 360

Query: 509 IENA 512
           I +A
Sbjct: 361 ISSA 364


>gi|313893992|ref|ZP_07827558.1| Anticodon-binding domain protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441556|gb|EFR59982.1| Anticodon-binding domain protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 357

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 22/157 (14%)

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              A A + K    +VL    V    DG   KMSK  G+ +    ++D  G+D +R  + 
Sbjct: 1   MLTAVATTGKAPYNSVLTHGFVV---DGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWVS 57

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  +      VK+ S+          Y + R+ FR       D + +   +     
Sbjct: 58  SADYQADVRLSKDIVKQLSE---------VYRKIRNTFRFLLGNLDDFNPNT-DKVAYAD 107

Query: 488 ESEFDTSELQLIVHLAEYPRV---IENATIAQEPYKL 521
            SEFD     L+        V   + +A    E + L
Sbjct: 108 MSEFDK--WALLRL----EEVRQKVSDAYENYEFHML 138


>gi|171319956|ref|ZP_02909031.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171094786|gb|EDT39825.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     R    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTREDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|172059636|ref|YP_001807288.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689177|sp|B1YTA7|SYL_BURA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171992153|gb|ACB63072.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     R    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTREDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|12045122|ref|NP_072933.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|2507608|sp|P47508|SYL_MYCGE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3844862|gb|AAC71488.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078891|gb|ABY79509.1| leucyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 792

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 353 IYVMGSDHS-GY-----VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +YV G++H+  +               +   K     L+ + + L  DG   KMSK  G+
Sbjct: 519 LYVGGAEHAVLHLLYARFWHKFLFDKKLVSTKEPFQKLINQGMVLGPDGK--KMSKSKGN 576

Query: 407 FITLRHVVDEVGSDSVRFMML 427
            I    +VD  G+D++R  ++
Sbjct: 577 TINPTPLVDSHGADALRLYLM 597



 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIE-FVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            K L       +    +   K     ++ F   +  G +H+GH R   + D ++      
Sbjct: 9   EKWLKKWKNKDVNRFESDSNKKKYYVLDMFPYPSAAG-LHLGHVRAYTITDVISRYYKAK 67

Query: 158 GYEVT 162
           G+ V 
Sbjct: 68  GFNVI 72


>gi|303279394|ref|XP_003058990.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460150|gb|EEH57445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1065

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 355 VMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
           VM + H   +      V  +       +      L  L RD    KMSK  G+ +   +V
Sbjct: 637 VMETGHDILFFWVARMVMMSYGM-TNTLPFHTVYLHGLVRDEKGRKMSKSLGNVVDPLNV 695

Query: 414 VDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-----NPVFYVQYA 457
           +DE G D++RF +     + + L+ +  ++           N   ++ YA
Sbjct: 696 IDEQGCDALRFTLATGTAAGQDLNLNMDRLASNRNFTNKIWNAGKFLLYA 745


>gi|18977262|ref|NP_578619.1| leucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32171573|sp|Q8U2E6|SYL_PYRFU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|18892929|gb|AAL81014.1| leucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 967

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 65/205 (31%), Gaps = 31/205 (15%)

Query: 89  INLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N   +   + ++ L + +    E       K  K  I       +G +HVGH R   + 
Sbjct: 4   LNFKAIEEKWQKRWLEAKI---FEPNIKDKPKEKKFYITVAFPYLSGHLHVGHARTYTIP 60

Query: 148 DTLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D +A      GY V     ++I   G+ I  +A  +  R  Q ++          Y  VY
Sbjct: 61  DVIARFKRMQGYNVLFPMAWHI--TGSPIVGIAERIKNRDPQTIW---------IYRDVY 109

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
                          L  F +   + IVK +   A    IR      ++           
Sbjct: 110 KVPE---------DILWTFEDP--VNIVKYFMKAAKETFIR---AGFSVDWSREFYTTSL 155

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGI 290
                  I      L  +GY+ +G 
Sbjct: 156 FPPFSKFIEWQFWKLKEKGYIVKGT 180


>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 465

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 108/340 (31%), Gaps = 39/340 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V DT+   + F GY+V    YI++     + L      R  +
Sbjct: 29  CGPTVYNYIHIGNARPPIVFDTVRRYLEFRGYDVQ---YISNFTDVDDKLI-----RAAK 80

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
            L  +   + E +    Y + V   L  K +       E        D  +Q +  +I  
Sbjct: 81  ELGEDVPSIAERFI-DAYFEDV-SALGCKRADVHPRVTESM------DLIIQFIEALIEK 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A     D++     F        +  ID L          +    +   +K D    
Sbjct: 133 GF-AYESNGDVYFHTRRFDEYG-KLSQQSIDELR---------VGARIAVGEKKQDALDF 181

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       + P  K    +    + +A    KY     + I +            
Sbjct: 182 ALWKTAKEGEISWESPWGKGRPGWHIECSAMA---RKY---LGDTIDIHAGGQDLSFPHH 235

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A  SE           +   Y +    KMSK  G+F+ +  ++ +     +RF ML
Sbjct: 236 ENEIAQ-SEALTGKTFARYWMHNGYININNEKMSKSLGNFVLVHDIIKKHDPQVLRFFML 294

Query: 428 WRKNSELLDFDFCKVKEQSKEN----PVFYVQYAYARCRS 463
                  +++   ++ E ++         Y   A+ +  S
Sbjct: 295 SVHYRHPINYS-DELLENTRSGLERITTSYQNLAHRKEAS 333


>gi|114320013|ref|YP_741696.1| isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312139|sp|Q0AAD1|SYI_ALHEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114226407|gb|ABI56206.1| Isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 941

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 23/173 (13%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+ +     +  V E      VL         D    KMSK  G+ +  +
Sbjct: 559 LYLEGSDQHRGWFQSSLLTSVGVRETAPYKGVLTHGF---TVDEKGHKMSKSRGNVVAPQ 615

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR---QA 468
            V+D +G+D +R  +     S  +      + +++ +        AY R R+  R     
Sbjct: 616 KVMDTLGADILRLWVASSDYSAEMAVS-DGILKRTAD--------AYRRMRNTARFLLAN 666

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
            + F   +  + P +++P +         L          +  A    E +++
Sbjct: 667 LNGFEPAEHAVAPPDMLPLDRWAVDRAYLLQQQ-------VREAYERYEFHRI 712


>gi|323141857|ref|ZP_08076718.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413604|gb|EFY04462.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 829

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       +          K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 13  AKWQKYWEENKTFKVEMDKDKPKSYVLEMF-PYPSGNLHMGHVRNYSIGDVIARFRTMKG 71

Query: 159 YEV 161
           + V
Sbjct: 72  FNV 74


>gi|135143|sp|P13503|SYLM_SACDO RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|68519|pir||SYBYMX leucine-tRNA ligase (EC 6.1.1.4) precursor, mitochondrial - yeast
           (Saccharomyces sp.)
 gi|4842|emb|CAA31343.1| unnamed protein product [Saccharomyces douglasii]
          Length = 894

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + +        G      L  +   +  +F    P+G +H+GH R  V+ D+L      
Sbjct: 25  AIGEKWKQKTTRGPPKQGTLNNRSKYILCQF--PYPSGVLHIGHLRVYVISDSLNRFYKQ 82

Query: 157 SGYEVT 162
            GY V 
Sbjct: 83  RGYNVI 88


>gi|115350603|ref|YP_772442.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324034|sp|Q0BIB5|SYL_BURCM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115280591|gb|ABI86108.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     R    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTREDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|269138540|ref|YP_003295240.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984200|gb|ACY84029.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558556|gb|ADM41220.1| Methionyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 74/283 (26%), Gaps = 53/283 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL +       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 199 DLPSFGAMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRDAPYFGFEIPDAPGKYFYV 258

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDG--------SYTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D    L   D          Y +   D+ YF             
Sbjct: 259 WLDAPIGYMGSFKNLCDKRGDLNFDDYWGKESDAELYHFIGKDIVYF------------- 305

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI  R  +
Sbjct: 306 -----HSLF---WPAMLEGSGFRKPS-NVFVHGYVTV----NGAKMSKSRGTFIQARTYL 352

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           + +  D +R+    + +  + D D        + N                R A  I   
Sbjct: 353 NHLDPDCLRYYYAAKLSDRIDDIDLNLEDFVQRVNA----DIVNKVVNLASRNAGFITKR 408

Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            D  L      P   +                  I  A  A+E
Sbjct: 409 FDGQLSDTLADPALYQTFVDAAA----------EIAKAYEARE 441


>gi|281422306|ref|ZP_06253305.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403627|gb|EFB34307.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 496

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 103/334 (30%), Gaps = 37/334 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                 G  H+GH R A+  D L   +   GY+V     I D G                
Sbjct: 31  CGPTVYGDPHLGHARPAITFDILFRYLKHLGYKVRYVRNITDVG-----------HLEHD 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---VQAMMKI 244
           A   +D    +     +    + +   ++Y   +         P ++ ++   +    K+
Sbjct: 80  ADEGDDKIEKKARLEQLEPMEIAQYYTNRYHDAMEAL--NVLPPSIEPHATGHIIEQEKL 137

Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
           +++ L              D  + +      I+     +  + E        +   + D 
Sbjct: 138 VQEILDNGYAYESNGSIYFDIEKYNKDHKYGILSGRNLENVINESRELAGIGEKKNQADF 197

Query: 305 DRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
               L  +++   + + R P   SDG   +     A  +      FD    + G      
Sbjct: 198 ---ALWKKAS--PEHIMRWPSPWSDGFPGWHCECTAMGRKYLGSHFD----IHGGGMDLI 248

Query: 364 VK-RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH--------VV 414
                  +A AV+ +  Q+         +  +G   KM K  G+FITL          + 
Sbjct: 249 FPHHECEIAQAVASQGDQMVHYWMHNNMITINGQ--KMGKSLGNFITLEQFFTGNHDSLE 306

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
                 ++RF +L       +DF    +K   K 
Sbjct: 307 QAYSPMTIRFFILSAHYRSTVDFSNDALKASQKG 340


>gi|212692922|ref|ZP_03301050.1| hypothetical protein BACDOR_02422 [Bacteroides dorei DSM 17855]
 gi|265757054|ref|ZP_06090916.1| glutamyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664544|gb|EEB25116.1| hypothetical protein BACDOR_02422 [Bacteroides dorei DSM 17855]
 gi|263233553|gb|EEZ19182.1| glutamyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 505

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 102/290 (35%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MSERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    N D  +  G   G Y +   +++  KY   LL+            + 
Sbjct: 57  EEYIIESFKWLGINFDEGVSFGGNYGPYRQSERRDIYKKYVQVLLDSD-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             A +   R ++     Q+D   S     R   +  ++ +D L   G  Y        ++
Sbjct: 112 TPAELDAKRQEISNF--QYD--ASTRMSMRNSLTLPKEEVDALIADGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVHDIIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A              L+ L  DG   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWADTMPEFAHLPLL-LKPDGNG-KLSKRDGD 267


>gi|188990871|ref|YP_001902881.1| glutamyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|229470648|sp|B0RQU0|SYE_XANCB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|167732631|emb|CAP50825.1| Glutamyl-tRNA synthetase [Xanthomonas campestris pv. campestris]
          Length = 467

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 98/296 (33%), Gaps = 63/296 (21%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  RE        Q    A+
Sbjct: 8   APSPTGYLHIGGARTALYCWLEARHRGGQFVLRI-----EDTDRE-----RSTQAAIDAI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            +       L  ++  + +      Y + V ++L  +       +   + L  +++ ++ 
Sbjct: 58  -LEAMEWLGLGYDEGPIYQTQRIARY-QEVAEQLLAQ-GKAYYAYETREELDAMREAAMA 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
              K           +++    E    +R DP+ +                    P + T
Sbjct: 115 KQEK----------PRYNGAAREQQLPYRDDPNRV---------------IRFKNPLAGT 149

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
               D+ + ++   ++ +    D  + + DG  TY   + A     ++ G   +I   G 
Sbjct: 150 VVFDDLIKGRIEIANSELD---DMVIFRPDGYPTY---NFAVVVDDWDMGITEVIR--GD 201

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRH 412
           DH     R   +  A+     +   +      +  D    K+SKR G  D +  + 
Sbjct: 202 DHINNTPRQINIYEALGAPVPKFAHM-----PMILDEQGAKLSKRTGAADVMQYKD 252


>gi|320451519|ref|YP_004203615.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151688|gb|ADW23066.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 883

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K        G    + + G+  K  +  +   P+G +H+GH +   +GD LA      GY
Sbjct: 17  KWQRFWKEKGFMKAKEVPGRKGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGY 76

Query: 160 EV 161
           EV
Sbjct: 77  EV 78


>gi|262170811|ref|ZP_06038489.1| glutamyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261891887|gb|EEY37873.1| glutamyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 474

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 61  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKTVNEAAKEGEPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|240047297|ref|YP_002960685.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984869|emb|CAT04862.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 793

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 10/120 (8%)

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG----YVKRLEAVAAAVSE-- 376
            L  SDGS  Y   D      ++++     +Y+ G +H+     Y +    V        
Sbjct: 487 ILKNSDGS--YLNLDSPQALERFKKWLPVDLYIGGQEHAVGHLIYSRFWHKVLYEAGIVN 544

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
                  ++ + + L  DG   KMSK  G+ I    +++  G+D++R  +++      + 
Sbjct: 545 THEPFFKIVNQGMLLGSDG--SKMSKSKGNVINPDEILELYGADALRLFLMFMSPLTDVK 602


>gi|194366684|ref|YP_002029294.1| leucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693484|sp|B4SRE7|SYL_STRM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194349488|gb|ACF52611.1| leucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 880

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+Y  P  +         +   +  +      K     +   P+G +H+GH R   +GD 
Sbjct: 7   NVY-DPQQVESAAQQYWDATRAFEVDEASDKPKYYCLSMLPYPSGALHMGHVRNYTIGDV 65

Query: 150 LASLMAFSGYEV 161
           ++     +G+ V
Sbjct: 66  ISRYKRMTGHNV 77


>gi|309973006|gb|ADO96207.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 67/215 (31%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D +   ++ SD   Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREGIDFNEFWVEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|332295648|ref|YP_004437571.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178751|gb|AEE14440.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 918

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 15/155 (9%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ G+D   G+ +     + AV  K    +VL    +    D    KMSK  G+ I    
Sbjct: 551 YLEGTDQHRGWFQSSLLTSTAVFGKAPYKSVLTHGFIV---DEEGYKMSKSRGNVIAPLE 607

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+++ G+D +R  +     +  +     ++ EQ  +         Y + R+  R    + 
Sbjct: 608 VIEKSGADVLRIWVASSDYTGDVAIS-DRILEQQSD--------TYKKLRNTIRYMLSLL 658

Query: 473 PDLD-FDLFPRNVIPQESEFDTSELQ-LIVHLAEY 505
            D +  D    +       +  SE   LI  + +Y
Sbjct: 659 NDFNPKDSISPDRWLDLDRYIYSEFNDLIQEIDQY 693


>gi|296284593|ref|ZP_06862591.1| valyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 922

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 46/216 (21%), Gaps = 34/216 (15%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P+ +     +       + R          I     N TG +H+GH     + D + 
Sbjct: 12  TFDPADIEARWYAHWEQNGCF-RPERPDAEPFTIVNPPPNVTGSLHIGHALDNTLQDIVV 70

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G +      ++ AG     +        Q    N         Y          
Sbjct: 71  RYERLRGKDALWVVGMDHAGIATQMVVERQLEAKQDKRTN---------YSREDFIQKVW 121

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E   +    +                           L+ L    D    +         
Sbjct: 122 EWKAESGGAITGQ------------------------LRRLGCSMDWSREQFTMDEHFSK 157

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +  +  +L   G +Y            +    D +
Sbjct: 158 AVTKVFVDLYNDGLIYRDKRLVNWDPKLKTAISDLE 193


>gi|198463290|ref|XP_001352768.2| GA19040 [Drosophila pseudoobscura pseudoobscura]
 gi|198151195|gb|EAL30268.2| GA19040 [Drosophila pseudoobscura pseudoobscura]
          Length = 993

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 106/377 (28%), Gaps = 77/377 (20%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE-----FVSANPTGPMHVGHCRCAV 145
           ++L+  Y  K +        +   NL  +G   N           N TG +H+GH   A 
Sbjct: 37  VHLAAGYQPKEVEEAYWERDKEEANLPQEGNSCNRGPYRMLLPPPNVTGNLHLGHALMAT 96

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           V D +A      GYEV       D     +   ++     ++ L             G  
Sbjct: 97  VQDVIARQQRQLGYEV-------DWVPGTDHAGIATQVVVERTLTTA---------QGKT 140

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              +G+E           F EE W       +       I  DL+ L    +        
Sbjct: 141 RHDIGRE----------AFLEEVWRWKAAKGA------GIVQDLRLLGCNLNWSREYFTM 184

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                  +    + L  +G +         S T Q    D +  +       D  +   +
Sbjct: 185 DEQQAHAVNVAFERLFDEGLIRRRNSLVNWSTTLQSAISDIEVEVM------DIKEPTDI 238

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +  G     A         + R FD    V+  +      + +  A  +     +   +L
Sbjct: 239 RVPGYKHSIA---------FGRIFDFAYTVVDGE-----TQPDGSAEEIVVATTRPETIL 284

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRH--------------VVDEVGSDSVRFMMLWRKN 431
            ++        P     R  D + L+H              V  + G+ +V+        
Sbjct: 285 GDVAVAVHPLDPRYSKYRNRDMVQLKHPFRNDTIPLVFDLAVDRDFGTGAVKI------T 338

Query: 432 SELLDFDFCKVKEQSKE 448
                FDF      + E
Sbjct: 339 PAHDKFDFELAARHNLE 355


>gi|195169653|ref|XP_002025635.1| GL20807 [Drosophila persimilis]
 gi|194109128|gb|EDW31171.1| GL20807 [Drosophila persimilis]
          Length = 993

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 106/377 (28%), Gaps = 77/377 (20%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE-----FVSANPTGPMHVGHCRCAV 145
           ++L+  Y  K +        +   NL  +G   N           N TG +H+GH   A 
Sbjct: 37  VHLAAGYQPKEVEEAYWERDKEEANLPQEGNSCNRGPYRMLLPPPNVTGNLHLGHALMAT 96

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           V D +A      GYEV       D     +   ++     ++ L             G  
Sbjct: 97  VQDVIARQQRQLGYEV-------DWVPGTDHAGIATQVVVERTLTTA---------QGKT 140

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265
              +G+E           F EE W       +       I  DL+ L    +        
Sbjct: 141 RHDIGRE----------AFLEEVWRWKAAKGA------GIVQDLRLLGCNLNWSREYFTM 184

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
                  +    + L  +G +         S T Q    D +  +       D  +   +
Sbjct: 185 DEQQAHAVNVAFERLFDEGLIRRRNSLVNWSTTLQSAISDIEVEVM------DIKEPTDI 238

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +  G     A         + R FD    V+  +      + +  A  +     +   +L
Sbjct: 239 RVPGYKHSIA---------FGRIFDFAYTVVDGE-----TQPDGSAEEIVVATTRPETIL 284

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRH--------------VVDEVGSDSVRFMMLWRKN 431
            ++        P     R  D + L+H              V  + G+ +V+        
Sbjct: 285 GDVAVAVHPLDPRYSKYRNRDMVQLKHPFRNDTIPLVFDLAVDRDFGTGAVKI------T 338

Query: 432 SELLDFDFCKVKEQSKE 448
                FDF      + E
Sbjct: 339 PAHDKFDFELAARHNLE 355


>gi|154494136|ref|ZP_02033456.1| hypothetical protein PARMER_03481 [Parabacteroides merdae ATCC
           43184]
 gi|154085998|gb|EDN85043.1| hypothetical protein PARMER_03481 [Parabacteroides merdae ATCC
           43184]
          Length = 875

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 64/249 (25%), Gaps = 44/249 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K     + +G    +    +   + I     N TG +H+GH     + D L       G 
Sbjct: 15  KWYQYWLDNGFFKSKPDGREPYTIVI--PPPNVTGVLHMGHMLNNTIQDILIRRARMQGK 72

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
                   + A   I T A  V    QQ +   D                  E  +++  
Sbjct: 73  NACWVPGTDHA--SIATEAKVVNRLAQQGIKKTD-------LTREDFLKHAWEWKEEHG- 122

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
                                   II   L+ L    D   +           +  +  +
Sbjct: 123 -----------------------GIILKQLRKLGASCDWDRTAFTMDELRSESVIKVFVD 159

Query: 280 LARQGYVYEGI---------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
           L  +G +Y G+         L     +     +   K    R  + GD   R  + +   
Sbjct: 160 LYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDPEGRYAIVATTR 219

Query: 331 YTYFAADLA 339
                 D A
Sbjct: 220 PETIMGDTA 228


>gi|30249126|ref|NP_841196.1| leucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|48428538|sp|Q820M7|SYL_NITEU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30138743|emb|CAD85050.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 869

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
             P+G +H+GH R   +GD L+      GY V 
Sbjct: 42  PYPSGKLHMGHVRNYTIGDVLSRYRRMQGYNVM 74


>gi|315179385|gb|ADT86299.1| glutamyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 475

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 96/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG Y          E+ ++         E+K       Y+ + ++  IR +
Sbjct: 61  MTWLGLDWDEGPYYQTKRFDRYNEVVEQL------LAEDKAYKC---YAPKDLLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D    +   ++  A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDADHPKIKAVNEAAKEGDPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DGS TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQMD---DLIIRRTDGSPTY---NFCVVVDDVDMGITHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|224823411|ref|ZP_03696520.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603866|gb|EEG10040.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 872

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R   + D LA    F GY V
Sbjct: 42  PYPSGKLHMGHVRNYTITDVLARFKRFQGYNV 73


>gi|138896379|ref|YP_001126832.1| leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267892|gb|ABO68087.1| Leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 811

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K     + +       +Y+ G++H+     Y +    V   +   
Sbjct: 501 GSCWYYLRYIDPHNDKQLADPEKLKQWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGIV 560

Query: 378 KAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +     L  + + L  +    KMSK  G+ +    +V+  G+D++R
Sbjct: 561 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIVESHGADTLR 606


>gi|71280655|ref|YP_268460.1| leucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123761059|sp|Q484Q5|SYL_COLP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71146395|gb|AAZ26868.1| leucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 863

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 23/69 (33%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQAIEATVQKFWTDNNTFQAIENPDKEKFYCLAMFPYPSGRLHMGHVRNYSLGDVISRY 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRMQGKNVM 74


>gi|61680214|pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The
           Archaeon Pyrococcus Horikoshii Reveals A Novel Editing
           Domain Orientation
          Length = 810

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 83/284 (29%), Gaps = 37/284 (13%)

Query: 89  INLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N   +   + ++ L + +    E       K  K  I       +G +HVGH R   + 
Sbjct: 4   LNFKAIEEKWQKRWLEAKI---FEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIP 60

Query: 148 DTLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYY-- 201
           D +A      GY V     ++I   G+ I  +A  +  R  +   +Y +   +PE     
Sbjct: 61  DVIARFKRMQGYNVLFPMAWHI--TGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWT 118

Query: 202 ------PGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                    Y     KE   +          F      P    +      K+        
Sbjct: 119 FEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVK 178

Query: 253 NIQHDIF-------ISEDDFHRGDPSPIRDIID---NLARQGYVYEGILPPPKSKTTQKC 302
                 +       + + D   G+  PI D I     L   G V        + +T    
Sbjct: 179 GAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENGEVIYLPAATLRPETVYGV 238

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
                 +          V   + + D   T+  +  A +K  ++
Sbjct: 239 T----NMWVNPNAT--YVKAKVRRKDKEETWIVSKEAAYKLSFQ 276


>gi|15605834|ref|NP_213211.1| isoleucyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226181|sp|O66651|SYI_AQUAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2983002|gb|AAC06614.1| isoleucyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 956

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +     D+   L     + EG   P     +   + D   + F S      V RPL    
Sbjct: 518 NSEKGSDVWFELTSSQLLPEGYKCPKCGGDSFTKEEDILDVWFDSGCSHAAVIRPL---- 573

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLC 386
                              GF    +Y+ GSD   G+ +     +     +     VL  
Sbjct: 574 -------------------GFQKADLYLEGSDQHRGWFQASLLESVGSYLEAPYKAVLTH 614

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446
             +    D    KMSK  G+ I+ + VV E G+D +R  ++    +E +      +K+ +
Sbjct: 615 GFIV---DEKGRKMSKSLGNVISPQEVVKEFGADILRLWVVSEDYTEDVKLGKNLLKKIA 671

Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDTSELQ-LIVH 501
            +         Y + R+  R       D +   +  P   +     +  SELQ L+  
Sbjct: 672 DD---------YRKIRNTLRFIIGNLYDFNPRTNALPFEKLHHFDRWIISELQNLLKK 720


>gi|22537699|ref|NP_688550.1| methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25011651|ref|NP_736046.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76788328|ref|YP_330181.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77413421|ref|ZP_00789613.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|22534588|gb|AAN00423.1|AE014263_2 methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413191|emb|CAD47270.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76563385|gb|ABA45969.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77160515|gb|EAO71634.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 665

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 115/349 (32%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G++V     +++ G +I   A             
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAEEA---------- 65

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+   G   + K   ELL+   +K++     Y  +A+ KI    L  
Sbjct: 66  -------GITPQEYVD--GMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G +  G+ P       +   +  + 
Sbjct: 117 GDIYLGEYTGWYSVSDEEFFTESQLAEVYRD--ENGNMIGGVAPS----GHEVEKVSEES 170

Query: 309 LLFRSTMVGDDV------DRPLLKSDGSYTYFAA--------DLAYFKCKYERG------ 348
             FR +   D +          ++ DG               DLA  +  Y  G      
Sbjct: 171 YFFRMSKYADRLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSN 230

Query: 349 FDNMIYV---------------MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             ++IYV                  D S Y K   A    + +   + + +   ++ +  
Sbjct: 231 PKHVIYVWIDALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMAL 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DLPLPKRLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMR 339


>gi|325283253|ref|YP_004255794.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315062|gb|ADY26177.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 895

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 55/197 (27%), Gaps = 34/197 (17%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
             PS +    + +             K     +     N TG +H+GH     + DTL  
Sbjct: 15  FDPSQIEPKWAKLWREQPFRADAESPKPPFTIV-IPPPNVTGNLHLGHALDNTLIDTLTR 73

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
               +G+E    Y        ++   +S     ++ L    +D                 
Sbjct: 74  YKRMAGFEAL--YLPG-----MDHAGISTQVMVERELKAQGTD----------------- 109

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                         EK+L  V ++  Q    I+   L  L +  D          G    
Sbjct: 110 --------RHELGREKFLEKVWEWKEQYGGAILNQ-LTRLGVSADWTRERFTMDEGLSRA 160

Query: 273 IRDIIDNLARQGYVYEG 289
           +R    +L   G  Y G
Sbjct: 161 VRKQFVDLYHDGLAYRG 177


>gi|294673503|ref|YP_003574119.1| BatB/BatC protein [Prevotella ruminicola 23]
 gi|294471951|gb|ADE81340.1| putative BatB/BatC protein [Prevotella ruminicola 23]
          Length = 566

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM--GSDHSGYVKRLE 368
             + M    +D  ++ + G+    A D+A      E G    I V+  G DH G      
Sbjct: 151 VSAKMFLSSIDPSMMATQGTDIARAIDMATHSFTQEEGIGKAIIVITDGEDHEGGALESA 210

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT---LRHVVDEV---GSDSV 422
             A     +   + V   +   +   G    M    G+ +       +  +V   G  + 
Sbjct: 211 EAAKKAGMRVYVLGVGSTQGAPIPIPGTGDYMKDNTGNTVMSALNEDMCRQVAQAGGGAY 270

Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
             +       + LD +  K+ ++   + V+ 
Sbjct: 271 IHVENNSAAQDQLDNELSKLAKKETTSTVYS 301


>gi|260889017|ref|ZP_05900280.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861077|gb|EEX75577.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 633

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 56/366 (15%), Positives = 115/366 (31%), Gaps = 72/366 (19%)

Query: 159 YEVTREYYIN---DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG----- 210
           Y  T  YY N     G    T+   V  RY++        +      G  ++        
Sbjct: 6   YITTPIYYPNAAPHVGTAYTTIICDVVARYKRLTGEEVGFMTGVDEHGQKIQEAAEKNGF 65

Query: 211 --KELADKYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
             ++  DK S       E+  +        + +  +K +R+ +K ++ + DI+  E   +
Sbjct: 66  TPQQWVDKMSLNFTTLWEKLNISNTDFLRTTQERHLKTVREIIKRVHDKGDIYRGE---Y 122

Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD------DV 320
            G  S         + + +V E  L   K    +  D+      F+ +   +      + 
Sbjct: 123 VGKYSV--------SEETFVPENQLVDGKYMGKEVIDVKETSYFFKLSKYENALLEHIEK 174

Query: 321 DRPLLKSDGSYTYF-------AADLAYFKCKYERGF------DNMIYVM----------- 356
           +   +K +G              DL+  +  ++ G        ++IYV            
Sbjct: 175 NPDFIKPEGKKNEVIAFIRQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGA 234

Query: 357 ----GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM--------------PI 398
                ++          V   V +   + + ++   + +                     
Sbjct: 235 GFSTDTEQFDKFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGE 294

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+ +     V++ G D+ R+  L R+ +   D D+ K     + N         
Sbjct: 295 KMSKSLGNVVNPEEEVEKYGLDAFRYY-LMREATFGQDADYSKKAMVQRINADLANDLGN 353

Query: 459 ARCRSI 464
              R+I
Sbjct: 354 LLNRTI 359


>gi|229529949|ref|ZP_04419339.1| leucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333723|gb|EEN99209.1| leucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 878

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +   +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 26  NPQDIEHKVQQHWDNNKTFVVSEDPSKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 85

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 86  QRLQGKNV 93


>gi|154147872|ref|YP_001405724.1| glutamyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|238686698|sp|A7HZN3|SYE1_CAMHC RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|153803881|gb|ABS50888.1| glutamyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 462

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 97/283 (34%), Gaps = 40/283 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A     +G +        D        A ++   ++  
Sbjct: 7   APSPTGYLHIGGLRTALFNYLYAR---ANGGKFVLRIEDTDLKRNSVEAANAIVEAFKWC 63

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
             + D ++          +    +L  KY  +LL+          K Y  +A +  +R +
Sbjct: 64  GLDYDGEI--------VYQSSRFDLYKKYIQKLLDE-----NKAYKCYMSKAELDTLRAE 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A   +        DF+   P  I  +I             +  P S T +  D  +  
Sbjct: 111 QEARKERPKYDGRYRDFNGIPPKGIDPVI------------RIKAPLSGTIEFDDGIKGS 158

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F +  + DD    + +SDG+ TY    +         G  ++I   G DH     +  
Sbjct: 159 MKFNANDILDDF--IIARSDGTPTYNFTVV---IDDALMGITDVIR--GDDHLSNTPKQI 211

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            +  A+  K  +        V +       K+SKR G    + 
Sbjct: 212 VLYNALGFKIPKFYH-----VAMINGSDGRKLSKRHGATDVME 249


>gi|330993124|ref|ZP_08317062.1| Leucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759894|gb|EGG76400.1| Leucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 877

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 100 KILSSIVVSGIE--YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +       SGI          +     +E     P+G +H+GH R   +GD +A      
Sbjct: 23  QWQERWAASGIFDVPDVPPADRPKYYVLEMF-PYPSGQLHMGHVRNYTLGDVVARYKRAR 81

Query: 158 GYEV 161
           G+ V
Sbjct: 82  GFSV 85


>gi|329962245|ref|ZP_08300251.1| glutamate--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328530353|gb|EGF57230.1| glutamate--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 508

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 93/279 (33%), Gaps = 23/279 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G ++       D+   +      +   ++  
Sbjct: 11  APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGAEEYILESFKWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +E+  KY   LL+  +  ++       ++A    I   
Sbjct: 68  GIPFDEGVSFGGNHGPYRQSERREIYKKYVQVLLDAGK-AYIAFDTPEELEAKRAEI--- 123

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
                       S     R   +  ++ +D L   G  Y        ++     D+ R +
Sbjct: 124 -----ANFQYDASTRMQMRNSLTLSKEEVDALIAAGKQYVVRFKIEPNEDVHINDLIRGE 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             +  A     +        L+         K+SKR GD
Sbjct: 231 VLLYRAFGWADSMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|296535262|ref|ZP_06897471.1| glutamate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264415|gb|EFH10831.1| glutamate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 466

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 98/289 (33%), Gaps = 52/289 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ------INTLALSVF 182
           + +PTG +H+G  R A+     A      G  + R   I D   Q      +  +  S+ 
Sbjct: 8   APSPTGYLHIGGARTALFNFLFAR--HHGGQYLLR---IEDTDRQRSTPEAVQQILDSLA 62

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W    A                  + +   LA+  + +    PEE  L  +++ +++   
Sbjct: 63  WLGLDADEPPVMQTARESRHAEVARQL---LAEGKAYQCFCTPEE--LTEMRETAMKEGR 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               D         D   +E       P  ++ +I             +  P+   T   
Sbjct: 118 PPRYD-----GRWRDRDPAEA------PEGVKPVI------------RIKAPREGETVIH 154

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ + ++  ++T +    D  +L+SDG+ TY     A     ++    ++I   G DH  
Sbjct: 155 DLVQGEVRVQNTELD---DMIILRSDGTPTYLH---AVVVDDHDMAITHVIR--GDDHLT 206

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              R   V  A+  ++          + L       K+SKR G    L 
Sbjct: 207 NTFRQVMVYDAMGWRRPHFAH-----IPLIHGADGAKLSKRHGAVGALE 250


>gi|283769304|ref|ZP_06342204.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104080|gb|EFC05463.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
          Length = 443

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 93/316 (29%), Gaps = 43/316 (13%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  VV D L  +    G    +  Y+++     + +              ++ ++
Sbjct: 36  HIGNARPMVVFDVLKRVFEAIG---LKVNYVSNYTDVDDKIIHKALEE-----GVSEEEI 87

Query: 197 PEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254
              Y        K +  E  D                     S+ + +K ++D   A  +
Sbjct: 88  ANRYIQAYEDLRKQLNIEQPDHCPRVTHTMD-----------SIISFIKGLQDQGHAYEV 136

Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314
             D++ S D             ++ L     + E          T     D+        
Sbjct: 137 NGDVYFSVDSVSEYGSLS-HQNLEELDAGNRIAENEQKKNPLDFTLWKKTDKGIQW---- 191

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374
                 + P  K  G   +    +              I + G          E  AA  
Sbjct: 192 ------ESPWGK--GRPGWHTECV----VMINENLGQTIDIHGGGLDLKFPHHENEAAQ- 238

Query: 375 SEKKAQINVLLCE--LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
             ++A     L +  +     +    KMSK  G+ +    V  E+G++  R+++      
Sbjct: 239 --QRAMFGHELADHWMHNAMVNIDGEKMSKSLGNTLWAMDVTKELGTNLTRWLISSVHYR 296

Query: 433 ELLDFDFCKVKEQSKE 448
           + L+F    ++    E
Sbjct: 297 KELNFSDETIQAAKTE 312


>gi|237708312|ref|ZP_04538793.1| glutamyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237723523|ref|ZP_04554004.1| glutamyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229438074|gb|EEO48151.1| glutamyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229457533|gb|EEO63254.1| glutamyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 505

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 102/290 (35%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MSERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    N D  +  G   G Y +   +++  KY   LL+            + 
Sbjct: 57  EEYIIESFKWLGINFDEGVSFGGNYGPYRQSERRDIYKKYVQVLLDSD-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             A +   R ++     Q+D   S     R   +  ++ +D L   G  Y        ++
Sbjct: 112 TPAELDAKRQEISNF--QYD--ASTRMSMRNSLTLPKEEVDALIADGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVHDIIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A              L+ L  DG   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWADTMPEFAHLPLL-LKPDGNG-KLSKRDGD 267


>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 465

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 92/302 (30%), Gaps = 48/302 (15%)

Query: 250 KALNIQHDIFISED-DFHRGDPSPIRDI---IDNLARQGYVYEGILPPP----------- 294
           +A+N+  D    E  D        I  +   I+ L   GY Y+                 
Sbjct: 96  RAMNVDFDALGVERPDIEPRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYG 155

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG---------SYTYFAADLAYFKCKY 345
           K       D+   + +  +    D +D  L K               Y A    +     
Sbjct: 156 KLSGKSLEDLRAGERVAANDAKEDPLDFVLWKRAKPQDPAGASWESKYGAGRPGWHIECS 215

Query: 346 ERGFDNMI---YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
             G   +     + G          E   A  SE       +   +   +      KMSK
Sbjct: 216 AMGCTLLGEHFDIHGGGQDLQFPHHENEIAQ-SEGATGQTFVNYWMHNGFVQVDSEKMSK 274

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------------FCKVKEQSKE 448
             G+F T+R V+++  ++ VRF ++       L++               +  +K+ + +
Sbjct: 275 SLGNFFTIREVLEKFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPD 334

Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPR 507
                   A+AR     R A  +  D +  +    +    +E + T E  L   L     
Sbjct: 335 VAPLDWSEAHAR-----RFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLKRLAG 389

Query: 508 VI 509
           V+
Sbjct: 390 VL 391


>gi|76801778|ref|YP_326786.1| lysine--tRNA ligase [Natronomonas pharaonis DSM 2160]
 gi|90103017|sp|Q3IRL7|SYK_NATPD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76557643|emb|CAI49226.1| lysine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 545

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 113/353 (32%), Gaps = 57/353 (16%)

Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA-L 189
           +P+G  H+GH    + G  +A  +   GYEV + +  +D              R ++   
Sbjct: 40  SPSGVPHLGHFNEIMRGYFVAEALRERGYEVRQVFTTDD------------KDRLRKLPR 87

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
              D D        V    +G+ L   Y+     F          D       +++R   
Sbjct: 88  KLADLDWNVVGLGEVDAGALGRNLGRPYTDIPDPFG-------CCDSYGAHFTELLRRSA 140

Query: 250 KALNIQHDIFISEDDFHRGD--PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +A+ +  D  +S  + + G    + + D + N      V          +         +
Sbjct: 141 EAIGVPID-LVSNTELYAGGDFDAAVEDALANRDTAREVLSEFQDKVDDEYVPFFPQCAE 199

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADL---------------AYFK-----CKYER 347
             L   T+   D+D      DG+  Y  +D+               A F+      ++E 
Sbjct: 200 CGLLTETVTDIDLD------DGTVGYVCSDVEAGDDVIEGCGHEGRATFRAGKLPWRFEW 253

Query: 348 GFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
                  V+G D       + +       AVS +          +V  +       +S  
Sbjct: 254 PAQW--RVLGVDFEPFGKDHAEGSWPSGKAVSREVFDTEPP-VPMVYEWFTLNGDALSSS 310

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
           AG+ IT+  V++ +    +R+    +   +  DFD   +     E   F   Y
Sbjct: 311 AGNIITVDEVLELLEPAVLRYFF-TKNPKKQRDFDVSNLDRFVDEFDRFEAGY 362


>gi|16799346|ref|NP_469614.1| glutamyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|22257059|sp|Q92F38|SYE_LISIN RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|16412698|emb|CAC95502.1| gltX [Listeria innocua Clip11262]
          Length = 491

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 43/308 (13%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGA 172
           +  +V + + + +PTG +H+G+ R A+     A       ++     +  R    +   +
Sbjct: 3   ETKRVRVRY-APSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKR-NVADGEES 60

Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLP 231
           Q+  L      ++    ++   D+P  Y  G Y +   + + +    +LL+     K   
Sbjct: 61  QMKNL------KWLGMDWDEGVDVPGKY--GPYRQSERQSIYEPLIQQLLDKGLAYKCYC 112

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
             ++   +   +    ++   + +      E                    QG+      
Sbjct: 113 TEEELEAEREKQKANGEMPRYSGKCRHLTKEQQ-------------AEKEAQGFKPSIRF 159

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P ++T    DM +  + F S  +GD     + K DG  TY   + A     +     +
Sbjct: 160 KVPANETITFNDMVKDDVSFESNGIGDF---VIAKKDGIPTY---NFAVAVDDHLMEISH 213

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           ++   G DH     +   +  A   +      +      L  +    K+SKR G  I   
Sbjct: 214 VLR--GDDHISNTPKQILIYNAFGWEPPIFGHM-----TLIVNESRRKLSKRDGSIIQFI 266

Query: 412 HVVDEVGS 419
               ++G 
Sbjct: 267 EQYRDLGY 274


>gi|86148573|ref|ZP_01066858.1| leucyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85833639|gb|EAQ51812.1| leucyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 858

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQEIEQKVQQHWDNSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|332245946|ref|XP_003272112.1| PREDICTED: valyl-tRNA synthetase, mitochondrial isoform 3 [Nomascus
           leucogenys]
          Length = 909

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 44/160 (27%), Gaps = 32/160 (20%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
            N TG +H+GH     + D L       G                            Q L
Sbjct: 6   PNVTGSLHIGHALTVAIQDALVRWHRMRG---------------------------DQVL 38

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           +   SD        V  K    +L  +          E +L  V  +  +A    I + L
Sbjct: 39  WVPGSDHAGIATQAVVEK----QLWKERGVRRHELSREAFLREVWHWK-EAKGGEICEQL 93

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           +AL    D          G    + +    L + G +Y  
Sbjct: 94  RALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRN 133


>gi|315613349|ref|ZP_07888258.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314584|gb|EFU62627.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 679

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 113/346 (32%), Gaps = 71/346 (20%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      GY+V     +++ G +I   A             
Sbjct: 29  PSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAEEA---------- 78

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                  G  P  Y+  +   + + +  +LL+   +K++    DY  + + ++    L  
Sbjct: 79  -------GITPQAYVDSMAVGVKELW--KLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 129

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQ---GYVYEGILPPPKSKTTQKCDMD 305
            +I   ++  + S  D      S + ++  + A     G    G      S+ +    + 
Sbjct: 130 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLS 189

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA--------DLAYFKCKYERG------FDN 351
           + Q            D   +  DG               DLA  +  +  G        +
Sbjct: 190 KYQNRL-VEFFKSHPD--FITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKH 246

Query: 352 MIYVM-GS-------------DHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGM 396
           ++YV   +             DH+ Y K        +  +   + + +   ++ +  D  
Sbjct: 247 VVYVWIDALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMK 306

Query: 397 --------------PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                           KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 307 LPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 352


>gi|309379503|emb|CBX21869.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|290580003|ref|YP_003484395.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996902|dbj|BAH87503.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 669

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       ++V                 L    +  Q    
Sbjct: 16  PSGKLHIGSAYTTIACDVLARYKRMMNHDV------------FYLTGLDEHGQKIQQKSE 63

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + +  +    L  
Sbjct: 64  EAGISPQAYVDG-------MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQ 116

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + +I  +    G V  GI P       +   +  + 
Sbjct: 117 GDIYLGEYSGWYSVSDEEFFTESQLEEIFRD--EDGKVIGGIAPS----GHEVEWVSEES 170

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYF--------AADLA------YFKCKYERG 348
              R +   D            ++ DG               DLA       +  K    
Sbjct: 171 YFLRLSNYADRLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSN 230

Query: 349 FDNMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G     +    +     V   V +   + + +   ++ +  
Sbjct: 231 PKHVVYVWIDALLNYATALGYGQDDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 290

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 291 DLKMPERLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMR 339


>gi|237736150|ref|ZP_04566631.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421703|gb|EEO36750.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 472

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 99/325 (30%), Gaps = 46/325 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R A+  DT+     F GY+VT      D   +I   A         
Sbjct: 28  CGPTVYNYIHIGNARPAIFFDTVRRYFEFRGYKVTYVSNFTDVDDKIIKRA--------- 78

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR- 246
               N+  +        Y+K   ++ A       +N  EE  +       +  M+K+I+ 
Sbjct: 79  ----NEEGISCEEVAAKYIKAYFEDTAK------VNLKEEGMIRPKATEHIGGMIKLIKS 128

Query: 247 --DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304
             +   A   Q D++   + +           +++L        G             D 
Sbjct: 129 LIEKGHAYESQGDVYFDVESYKDEYLGLSHQNLEDLRS------GARIEISEIKKSPLDF 182

Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364
               L  ++       + P     G   +    +      ++   D    + G       
Sbjct: 183 ---ALWKKAKEGEPSWNSPW--GQGRPGWH---IECSAMSHKYLGDTF-DIHGGGQDLIF 233

Query: 365 KRLEAVAA----AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
              E   A          A+  +        Y +    KMSK  G+F  LR V++     
Sbjct: 234 PHHENEIAQSKCGCGGDYARYWMH-----NGYINVNGEKMSKSLGNFFLLRDVLEHYDGR 288

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQ 445
            VR  +L     + +DF   ++ + 
Sbjct: 289 VVRLFVLSSHYRKPIDFSDAELTQA 313


>gi|229522163|ref|ZP_04411580.1| glutamyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229341088|gb|EEO06093.1| glutamyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 488

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 22  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 74

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 75  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 125

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 126 QEA----------NKEMPRYDANHPKIKAVNEAAKEGEPCCIRFRNPKEGSVVFDDQIRG 175

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 176 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 227

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 228 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 262


>gi|187663990|sp|A7MZT3|SYM_VIBHB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 686

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEENKFFYV 253

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G F+     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
             +  + +R+    + NS + D D        + N
Sbjct: 348 KHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|126666689|ref|ZP_01737666.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628734|gb|EAZ99354.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 939

 Score = 39.9 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 80/235 (34%), Gaps = 35/235 (14%)

Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM------MKIIRDDLKALNI 254
           Y       +  E  +  +  L      +W+P      ++AM        + R     + I
Sbjct: 418 YRATPQWFISMEKENLRADALEAIKGVRWVPTWGQNRIEAMVRQSPDWCVSRQRTWGVPI 477

Query: 255 QHDIFISEDDFHRGDPSPIRDI-----IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
              I     + H    S I  +     ID +     +    +    +   +K  +D   +
Sbjct: 478 TLFIHKETQNLHPNTQSLIEKVAQAIEIDGIDAWYDLDAREILGDDADHYEKV-LDTLDV 536

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLE 368
            F S +  +     +L+     + F ADL               Y+ GSD   G+ +   
Sbjct: 537 WFDSGVTHES----VLRVREELSQFPADL---------------YLEGSDQHRGWFQSSL 577

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             + A++       VL         DG   KMSK  G+ I  + V +++G+D +R
Sbjct: 578 KTSIAINGVAPYKQVLTHGF---TVDGKGYKMSKSLGNVIAPQEVTNDLGADILR 629


>gi|313669111|ref|YP_004049395.1| leucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006573|emb|CBN88037.1| putative leucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|312137335|ref|YP_004004672.1| isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225054|gb|ADP77910.1| Isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 1036

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 84/241 (34%), Gaps = 17/241 (7%)

Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264
            +K    E  DK    ++  PE   +   KD+   A    I    +       I+I E  
Sbjct: 409 KIKDKMLEEIDK----VVWIPEWAGMSRFKDWVKNAEDWTISRQ-RYWGTPLPIWICEKC 463

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
                   I+++ +    + +  + +  P   K   KC+   K           DV    
Sbjct: 464 NKITVVGSIQELKEKAIEKNFSGDFVHRPLIDKIFLKCECGGKMKRI------PDVLDVW 517

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383
           + S G   + + +    K  +E+ F       G D   G+            EK     V
Sbjct: 518 IDS-GVAGWASINYPKEKKLFEKLFPYDFITEGHDQTRGWFYSQLGCGVIAHEKIPYKKV 576

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML-WRKNSELLDFDFCKV 442
           L+        D    KMSK  G+ +    V+ + G+D +RF +L   K  E L F + +V
Sbjct: 577 LMHGF---TLDEQGRKMSKSLGNVVEPEEVIRKYGADVLRFYLLWANKPWEDLRFVWEEV 633

Query: 443 K 443
           K
Sbjct: 634 K 634


>gi|296270263|ref|YP_003652895.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermobispora bispora DSM 43833]
 gi|296093050|gb|ADG89002.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermobispora bispora DSM 43833]
          Length = 836

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           D    KMSK  G+ +T   ++++ GSD+VR+     +      FD  ++K
Sbjct: 572 DPDRKKMSKSKGNVVTPMALLEQYGSDAVRYWAASGRPGTDTAFDIGQIK 621


>gi|293374330|ref|ZP_06620657.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646993|gb|EFF64976.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 811

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ G++H+     Y +    V   +   E K     L  + + L  +    KMSK  G+
Sbjct: 533 LYIGGAEHAVLHLLYARFWHKVLYDLGIVETKEPFQRLFNQGMILGEN--NEKMSKSKGN 590

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V+  G+D++R
Sbjct: 591 VVNPDDIVESHGADTLR 607


>gi|255068071|ref|ZP_05319926.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047669|gb|EET43133.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 878

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 9   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 68

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 69  RLNGFNVM 76


>gi|254421177|ref|ZP_05034895.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188666|gb|EDX83630.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 868

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 91  LYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +  SP+ +              +   +L     K     +   P+G +H+GH R   + D
Sbjct: 3   VRYSPAEIEAKWQQYWADNALNKTSADLGPDAKKFYALSMFPYPSGDLHMGHVRNYTITD 62

Query: 149 TLASLMAFSGYEV 161
            +A +    GY V
Sbjct: 63  VVARVRRMQGYNV 75


>gi|189030335|sp|A9M162|SYL_NEIM0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|21672629|ref|NP_660696.1| valyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009418|sp|Q8K9I1|SYV_BUCAP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21623262|gb|AAM67907.1| valyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 960

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 76/272 (27%), Gaps = 44/272 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + L +       +  N         I     N TG +H+GH     + D L   
Sbjct: 6   NPKDIEEHLYNFWEKNGFFKPNNNLNKPAFCIMMPPPNITGNLHMGHAFQQTIMDILIRY 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G     +   + AG     L        ++ +++ +    + Y    ++K + K  
Sbjct: 66  NRMQGKNTLWQVGTDHAGIATQILI-------ERQIFSEERKTKKDYSRNDFIKKIWKWK 118

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
                                ++SV+  M       K L    D    +        + +
Sbjct: 119 ------------------KKSNFSVKKQM-------KRLGNSVDWDREKFTLDPDISNSV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--------RKQLLF----RSTMVGDDVD 321
           ++    L +   +Y+           +    D        + +  F        + +   
Sbjct: 154 KEAFIILYKNNLIYQKKRLVHWDSKLETVISDLEVEHRLIKSKKWFIRYPIIKNIKNINI 213

Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
             LL +         D A      +  ++++I
Sbjct: 214 EYLLVATTRPETLLGDTALAINPKDDKYNHLI 245


>gi|115523435|ref|YP_780346.1| isoleucyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115517382|gb|ABJ05366.1| Isoleucyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 1058

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 25/172 (14%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP------LLKSDGSYTYFAAD-- 337
           V   I    +++       +  +  F  +   +D  +          S  ++ +   D  
Sbjct: 602 VNARIAEAFEAEGADAWYEEGARERFLGSRANEDWQKVDDILDVWFDSGSTHAFVLEDPV 661

Query: 338 ----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK-KAQINVLLCELVRL 391
               L   K K + G D ++Y+ GSD   G+      +  +   + +A  +V+L     L
Sbjct: 662 HFPGLKGIKRKVDGGADTVMYLEGSDQHRGWFHSS--LLESCGTRGRAPYDVVLTHGFTL 719

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-------FMMLWRKNSELLD 436
             +G   KMSK  G+ +  + V+   G+D +R       +    R   E+L 
Sbjct: 720 DENGR--KMSKSLGNTVEPQKVMASSGADILRLWVCATDYADDQRIGPEILK 769


>gi|325204849|gb|ADZ00303.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|289548851|ref|YP_003473839.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182468|gb|ADC89712.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 926

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 27/185 (14%)

Query: 253 NIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
            +  D ++ E      + SP   D+   L  +  + +G   P         + D   + F
Sbjct: 476 YVIKDQWLFEKVAQLVENSPTGADVWFTLPVEDLLPQGYRCPACGGDEFLKEEDILDVWF 535

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM-IYVMGSDHSGYVKRLEAV 370
            S               GS        A+   +  RG D   +Y+ GSD      +   +
Sbjct: 536 DS---------------GSSH------AFVLRR--RGIDKADMYLEGSDQHRGWFQASLL 572

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
            +  S   A    +L     +   G   KMSK  G+ ++ + V+ E G+D +R  ++   
Sbjct: 573 ESVASYGHAPYRSVLTHGFTVDEQGR--KMSKSLGNVVSPQEVLKEYGADILRLWVVSED 630

Query: 431 NSELL 435
            +E +
Sbjct: 631 YTEDI 635


>gi|255327696|ref|ZP_05368762.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295370|gb|EET74721.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 472

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 102/317 (32%), Gaps = 26/317 (8%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            I +  A   G  H+GH R A+V D L+  M + G +VT    + D   +I   +     
Sbjct: 25  RIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYRGLKVTTVRNVTDIDDKILAKSADSME 84

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
              +  + N+      Y            L      +   +       I + +++   + 
Sbjct: 85  PGFEGEFPNEQWWALAYRFEKVFAQAYAAL----GIDPPTYEPRATGHIPEMFALIQHLI 140

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303
                  AL+   D++     + +         ++++             P+     K  
Sbjct: 141 DRGHAYPALDDSGDVYFDVRSWDKYGA-LTNQSVEDMQDSADADPRGKRDPRDFALWKGY 199

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSD-H 360
            + + L           + P  +    +    + +A  Y   +++      I+  G D  
Sbjct: 200 KEGEPLT-------ASWESPWGRGRPGWHLECSAMAGKYLGSRFD------IHGGGLDLR 246

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             + +   A + A  +  A   +       +  +G   KMSK  G+ I+   ++      
Sbjct: 247 FPHHENELAQSTAAGDDFANFWMHNG---MVTYEGE--KMSKSIGNTISPAQMLQMARPL 301

Query: 421 SVRFMMLWRKNSELLDF 437
            VR+ +       +LD+
Sbjct: 302 VVRYYLGSAHYRSILDY 318


>gi|207342764|gb|EDZ70425.1| YLR382Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 249

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + +        G+            +  +F    P+G +H+GH R  V+ D+L      
Sbjct: 25  AIGEKWKQKTTRGLPKQDTPNSGSKYILCQF--PYPSGALHIGHLRVYVISDSLNRFYKQ 82

Query: 157 SGYEVT 162
            GY V 
Sbjct: 83  KGYNVI 88


>gi|190405424|gb|EDV08691.1| LeuRS [Saccharomyces cerevisiae RM11-1a]
 gi|256269121|gb|EEU04456.1| Nam2p [Saccharomyces cerevisiae JAY291]
 gi|259148361|emb|CAY81608.1| Nam2p [Saccharomyces cerevisiae EC1118]
          Length = 894

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + +        G+            +  +F    P+G +H+GH R  V+ D+L      
Sbjct: 25  AIGEKWKQKTTRGLPKQDTPNSGSKYILCQF--PYPSGALHIGHLRVYVISDSLNRFYKQ 82

Query: 157 SGYEVT 162
            GY V 
Sbjct: 83  KGYNVI 88


>gi|183221111|ref|YP_001839107.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911202|ref|YP_001962757.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775878|gb|ABZ94179.1| Cysteine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779533|gb|ABZ97831.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 485

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 110/369 (29%), Gaps = 54/369 (14%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
                  SG +         +               H+G+ R  +  D L   +   GY+
Sbjct: 6   FFFQNTKSGKKEPFQPKDPNSVTIYS-CGPTVYNFAHIGNIRSFLFVDVLRRALLLGGYK 64

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
           + +   I D                      +D  + E     V ++   K   D +  +
Sbjct: 65  LNQSMNITDI---------------------DDKIIKESIKQNVSVEEFTKPWTDAFFKD 103

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280
           L     +K     K       M  + + L++  + ++               +   I   
Sbjct: 104 LETLQVQKLEHYPKATESIDDMVTLVETLQSNGLAYER-----------DGNVYFSIQKF 152

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQ-----LLFRSTMVGDDVDRPLLKSDGSYTYFA 335
            + G + +  +   KS      D   K      +L+++    ++         G   +  
Sbjct: 153 NQYGELSKIDVSGMKSGVRYDADEYEKDDVRDFVLWKNQKTKEEKCWHTRIGMGRPGWHL 212

Query: 336 ADLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
              A  +  Y  G D     I ++   H     +           +            L 
Sbjct: 213 ECSAMIRKIYGTGIDIHTGGIDLLFPHHENEFAQSVGA-----YPEETFVGTWLHCEHLL 267

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGS-DSVRFMMLWRKNSELLDFDFCKVKEQSK---- 447
            DG   KMSK  G+F TLR ++++     ++RF ++       L+F   K++E       
Sbjct: 268 VDGE--KMSKSKGNFYTLRDILNKGFEPRAIRFHLISAHYRSKLNFSLGKLEESKVALDR 325

Query: 448 -ENPVFYVQ 455
            +N +F + 
Sbjct: 326 IQNTIFRLL 334


>gi|89055968|ref|YP_511419.1| valyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88865517|gb|ABD56394.1| valyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 1029

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 11/79 (13%)

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           GFD +I+         V R+  +  AV +     +V +  LV   RD    KMSK  G+ 
Sbjct: 635 GFD-IIFFW-------VARMMMMQLAVVDDVPFRDVYVHALV---RDEKGRKMSKSIGNV 683

Query: 408 ITLRHVVDEVGSDSVRFMM 426
           +    ++DE G+D++RF +
Sbjct: 684 LDPLELIDEYGADALRFTL 702


>gi|89900225|ref|YP_522696.1| isoleucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344962|gb|ABD69165.1| Isoleucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 975

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 33/183 (18%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ G D   G+       A A+  +     +L         D    KMSK AG+ +  +
Sbjct: 606 LYLEGHDQHRGWFHSSLLTACAMYGRAPYKGILTHGF---TVDSKGHKMSKSAGNGVDPQ 662

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
               ++G++ +R  +     S  +  D  K+  +  +         Y R R+  +     
Sbjct: 663 ETSKKLGAEIIRLWVAASDYSGDIAGD-DKILARVVD--------TYRRIRNTLKFLLAN 713

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY-LYDLAS 530
             D D      + +PQE          ++ +  Y   +  A    +   LA Y +Y+   
Sbjct: 714 VSDFD---PATDAVPQEQ---------MLEIDRY--ALSRAAQ-LQADILAHYEVYE--- 755

Query: 531 VFH 533
            FH
Sbjct: 756 -FH 757


>gi|145638841|ref|ZP_01794449.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|145271813|gb|EDK11722.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|309750825|gb|ADO80809.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNT 382


>gi|262404554|ref|ZP_06081109.1| glutamyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349586|gb|EEY98724.1| glutamyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 474

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 61  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKAVNEAAKEGEPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|240141004|ref|YP_002965484.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010981|gb|ACS42207.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 522

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 116/406 (28%), Gaps = 46/406 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G +I   A       +  + +
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQTASRAGVTPRAFVDD 79

Query: 192 NDSDLPEGYYPGV--YLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIR 246
                          Y + +    AD Y++             + + K     ++     
Sbjct: 80  MAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAGWYSVRDEAY 139

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            D     +  D             ++ E+++          ++   A Q       L P 
Sbjct: 140 YDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLYAEQ----PDFLGPE 195

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--- 351
                    +         +    D   P+    G   Y   D A        GF +   
Sbjct: 196 TRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVD-ALTNYLTVTGFPDAQA 254

Query: 352 --------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                    ++++G D    + R  AV   A  +S        +      L R     KM
Sbjct: 255 PNARFWPASLHIIGKD----IVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG---EKM 307

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQ-YAY 458
           SK  G+ +    +V   G D VR+ +L         ++D   +  +   +    +   A 
Sbjct: 308 SKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGNLAQ 367

Query: 459 ARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLA 503
                I +  +   P+   F      ++   +        L+ +LA
Sbjct: 368 RSLSMIAKNCEGTVPEPGAFTEADERLLAAAAALPEKARGLMQNLA 413


>gi|227358523|ref|ZP_03842848.1| leucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227161234|gb|EEI46308.1| leucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEDIEQTIQEHWEKNNTFKVTEDNNKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|197284333|ref|YP_002150205.1| leucyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693169|sp|B4EV14|SYL_PROMH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194681820|emb|CAR41076.1| leucyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEDIEQTIQEHWEKNNTFKVTEDNNKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|196250006|ref|ZP_03148701.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|189030345|sp|A4IRY3|SYL_GEOTN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196210520|gb|EDY05284.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 805

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K     + +       +Y+ G++H+     Y +    V   +   
Sbjct: 495 GSCWYYLRYIDPHNDKQLADPEKLKQWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGIV 554

Query: 378 KAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +     L  + + L  +    KMSK  G+ +    +V+  G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIVESHGADTLR 600


>gi|209542815|ref|YP_002275044.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530492|gb|ACI50429.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 871

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P +  +   +      +       +     +E     P+G +H+GH R   +GD +A   
Sbjct: 16  PHWQAEWDRAGAFDVPDVPPAD--RPKYYVLEMF-PYPSGQLHMGHVRNYTLGDVVARYK 72

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 73  RARGHSV 79


>gi|162148176|ref|YP_001602637.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786753|emb|CAP56336.1| puative leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P +  +   +      +       +     +E     P+G +H+GH R   +GD +A   
Sbjct: 22  PHWQAEWDRAGAFDVPDVPPAD--RPKYYVLEMF-PYPSGQLHMGHVRNYTLGDVVARYK 78

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 79  RARGHSV 85


>gi|229581840|ref|YP_002840239.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012556|gb|ACP48317.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
           islandicus Y.N.15.51]
          Length = 934

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEV 161
           GY V
Sbjct: 69  GYNV 72


>gi|94500493|ref|ZP_01307024.1| valyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427283|gb|EAT12262.1| valyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 953

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 57/210 (27%), Gaps = 35/210 (16%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + K           +          + I     N TG +H+GH     V D +       
Sbjct: 10  IEKSWYQTWEDKGYFAPQGGDDSFCIMI--PPPNVTGSLHMGHGFNNAVMDCMVRYNRMK 67

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G                           +  L+   +D        V  + +  +  D+ 
Sbjct: 68  G---------------------------KNTLWQPGTDHAGIATQMVVERQLAAQGQDRK 100

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
           +     F E+ W    KD+S   + + IR     L    D          G  + ++++ 
Sbjct: 101 ALGREKFLEKVWE--WKDHSGGTITQQIR----RLGSSVDWSRERFTMDDGLSNAVQEVF 154

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             L ++  +Y G               D +
Sbjct: 155 VRLYKEDLIYRGKRLVNWDPKLHTAISDLE 184


>gi|51891582|ref|YP_074273.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|60390687|sp|Q67SB4|SYL_SYMTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51855271|dbj|BAD39429.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 861

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 16/147 (10%)

Query: 333 YFAADLAYFKCKYERGFDNMI---YVMGSDHS----GYVKRLEAVAAAVSE-KKAQINVL 384
           Y     A      E     M    YV G +H+     Y +    V   +   K  +    
Sbjct: 516 YTDPQNAERPWNREDVDYWMPVDQYVGGIEHAVLHLLYARFFTKVLRDMGLVKVDEPFAR 575

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVK 443
           L     + +DG   KMSK  G+ ++   ++ + G+D+VR F+M        LD+    ++
Sbjct: 576 LLTQGMVLKDG--SKMSKSKGNTVSPEEMIAKYGADAVRLFIMFAAPPERDLDWSDAGIE 633

Query: 444 EQSKENPVFY-----VQYAYARCRSIF 465
             ++    FY        AY   RS+ 
Sbjct: 634 GAARFVNRFYRMVVSALPAYQHARSLL 660


>gi|325841283|ref|ZP_08167384.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489964|gb|EGC92311.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 811

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ G++H+     Y +    V   +   E K     L  + + L  +    KMSK  G+
Sbjct: 533 LYIGGAEHAVLHLLYARFWHKVLYDLGIVETKEPFQRLFNQGMILGEN--NEKMSKSKGN 590

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V+  G+D++R
Sbjct: 591 VVNPDDIVESHGADTLR 607


>gi|323477689|gb|ADX82927.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Sulfolobus
           islandicus HVE10/4]
          Length = 934

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEV 161
           GY V
Sbjct: 69  GYNV 72


>gi|320450562|ref|YP_004202658.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150731|gb|ADW22109.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 891

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 56/198 (28%), Gaps = 39/198 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
            + P +  K   +  V+  + G+          I     N TG +H+GH     + D L 
Sbjct: 40  TVEPKWAEKWAKNPFVANPKSGKTP------FVIFMPPPNVTGSLHMGHALDNSLQDALI 93

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE                                   LP   + G+  + V +
Sbjct: 94  RYKRMQGYEAV--------------------------------WLPGTDHAGIATQVVVE 121

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L  K      +   E +L  V ++  ++   I++  LK L    D              
Sbjct: 122 RLLLKEGKTRHDLGREAFLKRVWEWKEESGGTILKQ-LKRLGASADWSREAFTMDEARSK 180

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R        +G  Y  
Sbjct: 181 AVRYAFSRYYHEGLAYRA 198


>gi|238620094|ref|YP_002914920.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238381164|gb|ACR42252.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
           islandicus M.16.4]
          Length = 934

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEV 161
           GY V
Sbjct: 69  GYNV 72


>gi|229579473|ref|YP_002837871.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284998118|ref|YP_003419885.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
           [Sulfolobus islandicus L.D.8.5]
 gi|228010187|gb|ACP45949.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
           islandicus Y.G.57.14]
 gi|284446013|gb|ADB87515.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
           [Sulfolobus islandicus L.D.8.5]
          Length = 934

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEV 161
           GY V
Sbjct: 69  GYNV 72


>gi|313127462|ref|YP_004037732.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293827|gb|ADQ68287.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 962

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 104/298 (34%), Gaps = 28/298 (9%)

Query: 163 REYYIN----DAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217
           +E++      + G     L   V  R++ A  +  +    + +   V  +     +  + 
Sbjct: 398 KEFHAGRLFDEYGEFAGELVEDVRTRFRDAHRDEGAFGTMQEFSEEVVCRCGADVVVAEQ 457

Query: 218 SSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            +  L + +E W     D    + A+ +  R +        + +    ++  G   P  D
Sbjct: 458 DTWFLRYNDEAWKQKAHDVVSRMDAIPENTRGEYDHTIDWLNEWPCIRNYGLGTRLPWDD 517

Query: 276 --IIDNLARQG--YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331
             +I+ L+       Y  I    +    ++ D D    LF      +D D   L+    +
Sbjct: 518 DFVIEPLSDSTIYMAYYTIAHRLQDVPVEELDRDFFDALFYGADAVEDPDEKALELRKEW 577

Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
            Y      ++   Y    +++I       S ++       A + ++      ++   + L
Sbjct: 578 NY------WYPVTYRFSANDLI-------SNHLTFYLFHHAELFDQSNWPEGIVIMGMGL 624

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
                  KMS   G  +     ++E G+D+VRF +L        D+D+   + +S  N
Sbjct: 625 LEG---EKMSSSKGHVVLPGKAIEEYGADTVRFFLL-NSAEPWQDYDWRAEQVESVRN 678


>gi|227827868|ref|YP_002829648.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229585136|ref|YP_002843638.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227459664|gb|ACP38350.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
           islandicus M.14.25]
 gi|228020186|gb|ACP55593.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
           islandicus M.16.27]
          Length = 934

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEV 161
           GY V
Sbjct: 69  GYNV 72


>gi|225621162|ref|YP_002722420.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782486|sp|C0QWR3|SYL_BRAHW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225215982|gb|ACN84716.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 853

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 4/72 (5%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N       + K           +         K  +  +   P+G MH+GH     + D+
Sbjct: 4   NFT----TIEKKWQKFWKDNQSFKTVSKPTDKKYYVLEMFPYPSGKMHMGHVSNYTIADS 59

Query: 150 LASLMAFSGYEV 161
           +A      GY++
Sbjct: 60  IARYYKLLGYDI 71


>gi|254452559|ref|ZP_05065996.1| valyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198266965|gb|EDY91235.1| valyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 1018

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV  +     + L  LV   RD    KMSK  G+ I    ++DE G+D++
Sbjct: 626 WVARMMMMQLAVVGEVPFNTIYLHGLV---RDAKGKKMSKSTGNVIDPLDIIDEYGADAL 682

Query: 423 RF 424
           RF
Sbjct: 683 RF 684


>gi|187478838|ref|YP_786862.1| valyl-tRNA synthetase [Bordetella avium 197N]
 gi|115423424|emb|CAJ49958.1| valyl-tRNA synthetase [Bordetella avium 197N]
          Length = 961

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 51/171 (29%), Gaps = 33/171 (19%)

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178
                 I+F   N TG +H+GH     + D L      SG +       + AG  I T  
Sbjct: 48  DPKPYCIQFPPPNVTGTLHMGHAFNQTIMDGLIRYHRMSGDDTVFIPGTDHAG--IATQI 105

Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238
           +       Q L  +D                                 E+++  V ++  
Sbjct: 106 VVERQLDAQKLSRHD------------------------------LGRERFVEKVWEWKE 135

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289
           Q+    I + ++ L    D               + +    L RQG +Y G
Sbjct: 136 QSG-NTITNQVRRLGASADWPREYFTMDERMSRGVAETFVQLYRQGLIYRG 185


>gi|20094800|ref|NP_614647.1| leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|32171571|sp|Q8TVM4|SYL_METKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19888009|gb|AAM02577.1| Leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 943

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 65/199 (32%), Gaps = 26/199 (13%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +       +G+        +   + + +    P+G MHVGH R  +V D  A      G
Sbjct: 7   ERQWKEWEEAGLFEADPDDRESVYITVAY--PYPSGSMHVGHARTYLVPDIYARFKRMQG 64

Query: 159 YEVT--REYYINDAGAQINTLALSVFWR-------YQQALYNNDSDLPEGYYPGVYLKHV 209
           Y V     +++   G  +  +A  +          Y+      + +L +   P   +++ 
Sbjct: 65  YNVLFPMAFHV--TGTPVVGIAERIKEGDEDTIRLYRDLYGVPEEELEKFTEPEAIVEYF 122

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI------------QHD 257
            +E  +       +    +    V D   ++ +      L+   +              +
Sbjct: 123 AREYEENMKRMGYSIDWRRKFTTV-DPEYRSFITWQYLRLREKGLVDKGEHPVRYCPHCE 181

Query: 258 IFISEDDFHRGDPSPIRDI 276
             + + D   G+ + I ++
Sbjct: 182 NPVGDHDLLEGEDATIEEL 200


>gi|332283969|ref|YP_004415880.1| isoleucyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330427922|gb|AEC19256.1| isoleucyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 947

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 77/226 (34%), Gaps = 33/226 (14%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+          +  +     +L    V    DG   KMSK  G+ I  +
Sbjct: 578 LYLEGSDQHRGWFHSSLLTGCMLYGRPPYKALLTHGFVV---DGQGRKMSKSVGNVIAPQ 634

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V D +G++ +R        S  L      +K   +          Y R R+  +     
Sbjct: 635 KVSDALGAEILRLWTASTDYSGELSISDEILKRVVEG---------YRRIRNTLKFLLGN 685

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY----KL------ 521
             D +      + +  E  F+     L +  A    V+ +     E +    +L      
Sbjct: 686 LQDFN---PAADAVEPEHLFEIDRYALAMTAAMQAEVL-DCYKRYEFHPAVSRLQIFCSE 741

Query: 522 ---AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564
              AFYL D+       ++ G+ +   R  Q     +T   L+L+ 
Sbjct: 742 DLGAFYL-DVLKD--RLYTAGKTSVARRSAQTAVYHVTHTLLKLLA 784


>gi|325127472|gb|EGC50401.1| leucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|323474954|gb|ADX85560.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Sulfolobus
           islandicus REY15A]
          Length = 934

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +     +       +  N+     K  I         PMHVGH R  V  D  A  +   
Sbjct: 9   IASKWQAEWEKSKVFEANIDYSKPKFFITVPFPYTNSPMHVGHGRTYVTADVYARYLRMR 68

Query: 158 GYEV 161
           GY V
Sbjct: 69  GYNV 72


>gi|309813280|ref|ZP_07706996.1| glutamate--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308432776|gb|EFP56692.1| glutamate--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 520

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 86/277 (31%), Gaps = 30/277 (10%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
           V+ +PTG  HVG    A+     A      G +        D           +F     
Sbjct: 27  VAPSPTGDPHVGTAYMAMFDLAFAR---QQGGKFVLRIEDTDRARFQADSEQQIFDTLHW 83

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
              N D     G     Y +    +    Y  +L++  +  +        +  M ++ + 
Sbjct: 84  LDLNWDEGPDLGGPYAPYRQSERLDTYKPYVDKLIDEGK-AYYCYCTSERLAEMRELQQK 142

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
             + L   +D         R      R+  +  A  G+    ++             D  
Sbjct: 143 --QKLPTGYD---------RMCYGKSRE--ERAAEPGFSENPVVRMFIPDDAPLVFDDLI 189

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           +   ++       D+ ++K+DG  TY    LA     +E G  ++  V G +      + 
Sbjct: 190 RGEVKAPR---PDDQVIMKADGFPTYH---LAVVVDDHEMGITHV--VRGEEWISSTPKH 241

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +   +  +  +   +      L RD    K+SKR 
Sbjct: 242 ILLYQGLGLEPPKFAHM-----PLLRDEKKAKISKRK 273


>gi|37679095|ref|NP_933704.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|48428521|sp|Q7MN06|SYL_VIBVY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|37197837|dbj|BAC93675.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 857

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVTEDPTKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|307610052|emb|CBW99587.1| leucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 823

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +           +         K     +   P+G +H+GH R   +GD +A
Sbjct: 4   TYNPQEVEEQAQQYWHKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIA 63

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 64  RYQRALGKNV 73


>gi|148358880|ref|YP_001250087.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106927|ref|YP_003618627.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166231618|sp|A5IBJ1|SYL_LEGPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148280653|gb|ABQ54741.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648828|gb|ADG24675.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 823

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +           +         K     +   P+G +H+GH R   +GD +A
Sbjct: 4   TYNPQEVEEQAQQYWHKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIA 63

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 64  RYQRALGKNV 73


>gi|59711360|ref|YP_204136.1| leucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81310994|sp|Q5E6U8|SYL_VIBF1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|59479461|gb|AAW85248.1| leucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 858

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  L + +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDLEQKIQKHWDDNKTFVVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRY 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|54294236|ref|YP_126651.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|60390669|sp|Q5WWZ8|SYL_LEGPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53754068|emb|CAH15541.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 823

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +           +         K     +   P+G +H+GH R   +GD +A
Sbjct: 4   TYNPQEVEEQAQQYWHKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIA 63

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 64  RYQRALGKNV 73


>gi|52841578|ref|YP_095377.1| leucyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|60390674|sp|Q5ZVU2|SYL_LEGPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52628689|gb|AAU27430.1| leucyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 823

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +           +         K     +   P+G +H+GH R   +GD +A
Sbjct: 4   TYNPQEVEEQAQQYWHKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIA 63

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 64  RYQRALGKNV 73


>gi|332295717|ref|YP_004437640.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178820|gb|AEE14509.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 826

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
             + K   ++      +  +      K+ I  +   P+G +H+GH R   +GD +A    
Sbjct: 7   ETIEKKWQNVWREKRAFKTDDEKGNKKMYILEMFPYPSGNLHMGHVRNYTIGDVVARYYR 66

Query: 156 FSGYEV 161
              Y V
Sbjct: 67  MKSYNV 72


>gi|259909122|ref|YP_002649478.1| leucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964744|emb|CAX56261.1| Leucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479150|emb|CAY75066.1| leuS [Erwinia pyrifoliae DSM 12163]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEEIESHVQQHWDDKQTFKVTEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|149192022|ref|ZP_01870250.1| glutamyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834158|gb|EDL51167.1| glutamyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 475

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 96/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLFA---KNQGGEFVLR--IED--TDLERNSQQAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + +++ IR +
Sbjct: 61  MQWMGLEWDEGPYYQSKRFDRYNEMVDKL------LAEDKAYKC---YAPKELLEEIRSE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ-GYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  + +  N A + G         PK  +    D  R 
Sbjct: 112 QEA----------NKEIPRYDANHPKIVAANAAAKEGDPCVIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++   ++ +    D  + ++DG+ TY    +      ++ G  ++  V G DH     R 
Sbjct: 162 RIEISNSQMD---DLIIRRTDGAPTYNFVVV---VDDWDMGITHV--VRGEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+              + L  DG   K+SKR G  
Sbjct: 214 INIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|167648985|ref|YP_001686648.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082990|sp|B0T6E7|SYL_CAUSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167351415|gb|ABZ74150.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 861

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  ++   +             K  +  +   P+G +H+GH R   +GD +A      G+
Sbjct: 12  KWRAAWASANTFLTPITPDARPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGF 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|1061310|gb|AAA81332.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1063

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 65/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +  G       +     N TG +H+GH     + D+L  
Sbjct: 107 AAWYPWWEQQGFFKPEYGRPNVSAGNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 166

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 167 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 210

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 211 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 254

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 255 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 299


>gi|154248157|ref|YP_001419115.1| valyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154162242|gb|ABS69458.1| valyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 930

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +   +     ++      +  L RD    KMSK  G+ I    +V++ G+D++
Sbjct: 536 FFWVARMMMMGLHFMDGEVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADAL 595

Query: 423 RFMM 426
           RF +
Sbjct: 596 RFTL 599


>gi|148265162|ref|YP_001231868.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189030266|sp|A5G677|SYL_GEOUR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146398662|gb|ABQ27295.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 824

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS + +       +   +         K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 7   PSRVEEKWQKFWEANKSFRATEDKTREKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFK 66

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 67  RMKGFNV 73


>gi|320157153|ref|YP_004189532.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932465|gb|ADV87329.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 857

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVTEDPTKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|310766978|gb|ADP11928.1| leucyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEEIESHVQQHWDDKQTFKVTEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|289165660|ref|YP_003455798.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|288858833|emb|CBJ12747.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 824

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +  +      K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PQEVEEQAQQYWHKKQSFNVSEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RALGKNV 73


>gi|229079767|ref|ZP_04212300.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228703607|gb|EEL56060.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 517

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 115/348 (33%), Gaps = 37/348 (10%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164
                + +         +  +     +P+G +H+G+ R  V    +   +   G +    
Sbjct: 2   HWAYEVAHELIRKHPNKETFVCASGISPSGSVHIGNFREIVTTYFVVRALQGLGKKTRFI 61

Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224
           +  +D   +   +  ++   + + +     D+P+   P        +    ++   L  F
Sbjct: 62  FSWDDY-DRFRKVPKNIDPSFAKYIGMPYCDIPD---PSGCHNSYAEHFEKEFEKSLQAF 117

Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284
             E  +  +  Y      +  ++ L+AL  + +I+    DF  G+ S           + 
Sbjct: 118 GIE--VEFIYQYDEYRSGRYNKNILEALYKRKEIYDILMDFKTGESSE--------EERN 167

Query: 285 YVYEGILPPP---KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341
             Y   L      K  TT     +  + +      G++ +  +L ++             
Sbjct: 168 DFYPATLYCERCGKDTTTITHFDEVLKTVRYECECGNEKELSVLNTNKMKLN-------- 219

Query: 342 KCKYERGFDNMI-YVM----GSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
             K +     MI  V+    G DHS   G     + +A  +  ++A  + +  + +    
Sbjct: 220 -WKIDWPMRWMIEDVIFEPGGRDHSSETGSYNVSKEIARKIFNREA-PHYVAYDFI--GI 275

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            G   KMS  +G+ IT   ++     + + FM    K          +
Sbjct: 276 KGNHEKMSSSSGNSITPSDLLKVYIPEVILFMFAKYKPGAAFHIGLDE 323


>gi|254488853|ref|ZP_05102058.1| isoleucyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214045722|gb|EEB86360.1| isoleucyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 971

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 19/222 (8%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           + L      G+          T   +        G +H+GH     + D +       G+
Sbjct: 34  EWLERWEKIGVYDRLREKEGRTPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGF 93

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +     YI         +   +  +Y+    N D D+P   +     K     +      
Sbjct: 94  DAR---YIPGWDCHGLPIEWKIEEQYRNKGRNKD-DVPINDFRAECRKFAAGWV------ 143

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +   E K L I  +++   +      + + +  +   F+     ++G    +   ++ 
Sbjct: 144 -DVQREEFKRLGITGNWADPYLTMDFHAE-RVIAEEFMKFLMNGTLYQGSKPVMWSPVEK 201

Query: 280 --LARQGYVYEG-----ILPPPKSKTTQKCDMDRKQLLFRST 314
             LA     Y       I    K   T    +D  Q++  +T
Sbjct: 202 TALAEAEVEYHDKESFTIWVKFKVVGTGDAALDGAQVVIWTT 243


>gi|156973569|ref|YP_001444476.1| glutamyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166226865|sp|A7MY61|SYE_VIBHB RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|156525163|gb|ABU70249.1| hypothetical protein VIBHAR_01271 [Vibrio harveyi ATCC BAA-1116]
          Length = 475

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  +R +
Sbjct: 61  MEWLGLEWNEGPYFQTQRFDRYNEMVDKL------LEEDKAYKC---YASKELLDEVRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGEPCVIRFRNPKEGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +T +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEISNTQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|145629338|ref|ZP_01785137.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
 gi|144978841|gb|EDJ88564.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
          Length = 548

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 60  DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 119

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 120 WLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 165

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 166 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 213

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 214 HIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNT 248


>gi|13235480|emb|CAC33753.1| Glutamyl-tRNA synthetase [Rickettsia typhi]
          Length = 444

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           D  L+++DG+ TY    LA     ++ G  ++I   G DH     R  A+  A   +   
Sbjct: 146 DMILIRADGTATYM---LAVIVDDHDMGITHIIR--GDDHLTNAARQIAIYHAFGYEVPN 200

Query: 381 INVLLCELVRLYRDGMPIKMSKRAG 405
           +       + L       K+SKR G
Sbjct: 201 MTH-----IPLIHGADGTKLSKRHG 220


>gi|27363751|ref|NP_759279.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|29337023|sp|Q8DFE2|SYL_VIBVU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27359867|gb|AAO08806.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 857

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + + +     +   +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDIEQKVQQHWDNNKTFVVTEDPTKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRF 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|94309763|ref|YP_582973.1| glutaminyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123383972|sp|Q1LQ72|SYQ_RALME RecName: Full=Glutaminyl-tRNA synthetase; AltName:
           Full=Glutamine--tRNA ligase; Short=GlnRS
 gi|93353615|gb|ABF07704.1| glutamyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 582

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 17/172 (9%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + ++LR I+   + +G   GR           I      P G +H+GH +   V   LA 
Sbjct: 13  ASNFLRSIIDQDLATGTYAGRADKQGDPLPTVITRFPPEPNGYLHIGHAKSICVNFGLAR 72

Query: 153 ------LMAFSGYEVTREY--YIN---DAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
                  + F      +E   Y++   DA   +     S        LY       + Y 
Sbjct: 73  DYAGRCHLRFDDTNPVKEDTEYVDSIIDAVHWLGFSWDSAQAGSTPHLYFASDYFDQLYK 132

Query: 202 PGVYLKH-----VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               L       V  + A++ ++   NF E       +D SV+  +K+ R+ 
Sbjct: 133 FAETLIERGVAYVDSQSAEQIAAMRGNFSEPGKPSPFRDRSVEENLKLFREM 184


>gi|327398216|ref|YP_004339085.1| methionyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327180845|gb|AEA33026.1| Methionyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 621

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 103/335 (30%), Gaps = 48/335 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH    +  DTLA      G +V      ++ G +I   A S     +Q        +
Sbjct: 18  HIGHSYTTLAADTLARYKRLLGEDVFFLTGTDEHGQKIQKAAKSANTTPKQLADR----V 73

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN-IQ 255
            E +        +      + + +      ++    +          I + + +    I 
Sbjct: 74  VENFKKLWKKLDITNNFFVRTTDDYHQKCVQEAFEYIYKKG-----DIYKGEYEGWYCIP 128

Query: 256 HDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYE----------------GILPPPKSKT 298
            + + SE +       P+    +D +  + Y ++                  + P     
Sbjct: 129 CESYYSEIEIGENKTCPVCGRKLDLVKEESYFFKLSAYQDRLLEFYENNPDFVLPQTRYN 188

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----YERGFDNM-- 352
             K  +         T    D   P+   D    Y   D            +  FD++  
Sbjct: 189 EIKSFVKMGLKDLSITRTSFDWGIPVPFDDKHVIYVWFDALLNYVSAIGCRKGDFDDIWP 248

Query: 353 --IYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
             ++ +G D    H+ Y     A   A+     +  V         +     KMSK  G+
Sbjct: 249 ADVHFVGKDILRFHAVY---WPAFLMALDLPLPKHVVAHGWWTVDGK-----KMSKSLGN 300

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            +    ++++   D+ R+ +L R     LD DF +
Sbjct: 301 VVDPNEMIEKYPRDAYRYFLL-RNVPFGLDGDFSE 334


>gi|325129489|gb|EGC52318.1| leucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|322493703|emb|CBZ28993.1| putative valyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 967

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 63/254 (24%), Gaps = 38/254 (14%)

Query: 92  YLSPSYLRKILSSIVVSGIEY----GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
              P+ +             +      N         I     N TG +H+GH     V 
Sbjct: 4   TYDPAAVEADWYPWWEKSGFFRPTSDHNSEAAAKPFVIVAPPPNVTGYLHLGHALTGAVQ 63

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           DTL       G         + AG     +                              
Sbjct: 64  DTLIRFHRMKGDNTLYLPGTDHAGIATQVV------------------------------ 93

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V + +  +      +   ++++  + ++  ++   +I +  + + +  D          
Sbjct: 94  -VERRVMKEEGKSRHDLGRDEFMKRLWEFK-KSHAGMITEQFRRIGLSLDWTRERFTMDE 151

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-DVDRPLLK 326
              + + +    L     V+            Q    D +             +     K
Sbjct: 152 QSSAAVVEAFVRLHEDDLVHRDTRLVNWCCALQSAISDLEVEFVDVAKTSKMTIPGYDRK 211

Query: 327 SD-GSYTYFAADLA 339
            D GS T+ A  LA
Sbjct: 212 VDMGSLTHVAYKLA 225


>gi|315658520|ref|ZP_07911392.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496849|gb|EFU85172.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 916

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 85/520 (16%), Positives = 149/520 (28%), Gaps = 110/520 (21%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I   + I    +  +G  + N      +        IAE +   +    D D        
Sbjct: 237 IPSNVAITVHPELKYGQYNVNG-----KKY-----IIAEALADEVAEALDWDK------- 279

Query: 88  FIN-LYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMH--VGHCRC 143
             N + L   ++ K L  +        R +L+  G  V  +      TG +H   GH   
Sbjct: 280 --NHIKLEKEFMGKELEYVEAQHPFLDRVSLVINGNHVTTDAG----TGCVHTAPGHGED 333

Query: 144 A-VVGDTLASLMAFSGYEVTREYYINDAGA------QI-NTLALSVFWRYQQALYNNDSD 195
             +VG           Y +     +ND G       Q                L   D+ 
Sbjct: 334 DYIVGQK---------YGLPVISPLNDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKDAL 384

Query: 196 LPEGYYPGVYLKHV-------------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           L   +    Y                      +K   ++L+  EE    +    +    M
Sbjct: 385 LKLSFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETEFKVNWGKTRIYNM 444

Query: 243 KIIRDDL-----KALNIQHDIFISEDD---FHRGDPSPIRDIIDNL--------ARQGYV 286
              R +      +   +   +F +E+      +   + + D+ +            +  +
Sbjct: 445 IRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKETVNHVADLFEQYGSNVWFEREAKELL 504

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            EG   P         + D   + F S               GS           + + E
Sbjct: 505 PEGFTHPGSPNGEFTKETDIMDVWFDS---------------GSSH-----RGVLENRPE 544

Query: 347 RGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             F   +Y  GSD   G+       A A   +     +L    V    DG   KMSK  G
Sbjct: 545 LSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEGKKMSKSLG 601

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I    VV + G+D  R  +        +     ++ +Q+ +         Y + R+  
Sbjct: 602 NVIVPDQVVKQKGADIARLWVSSTDYLADVRIS-DEILKQTSD--------VYRKIRNTL 652

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           R       D + D         ES+    +  L+  L E+
Sbjct: 653 RFMLGNVNDFNPDTDAV----LESDLLEVDRYLLNRLREF 688


>gi|303228946|ref|ZP_07315756.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516360|gb|EFL58292.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 822

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            +K          EY  +           + S N    +H+GH R   +GD +A     +
Sbjct: 14  WQKYWDENHTFKTEYDESKEKYYALEMFPYPSGN----LHMGHVRNYSIGDVVARFKKMN 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|303231424|ref|ZP_07318155.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513861|gb|EFL55872.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 822

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            +K          EY  +           + S N    +H+GH R   +GD +A     +
Sbjct: 14  WQKYWDENHTFKTEYDESKEKYYALEMFPYPSGN----LHMGHVRNYSIGDVVARFKKMN 69

Query: 158 GYEV 161
           G+ V
Sbjct: 70  GFNV 73


>gi|301620268|ref|XP_002939512.1| PREDICTED: valyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 1188

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 15/91 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           S              E+GR+            +     N TG +H+GH     + D L  
Sbjct: 288 SAWYSWWEKEKFFKPEFGRSSISEPNPKGLFMMCIPPPNVTGSLHLGHALTNAIQDCLTR 347

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFW 183
                 ++  R Y+      Q+  L  S+ W
Sbjct: 348 ------WKGDRIYH------QLRILGSSLDW 366


>gi|227533678|ref|ZP_03963727.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227188662|gb|EEI68729.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 461

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 110/314 (35%), Gaps = 58/314 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LS 180
                   +H+G+ R A+  DT+     + GY+VT      D   +I   A       L 
Sbjct: 21  CGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYKVTYVSNFTDVDDKIINAAHKTGEAPLD 80

Query: 181 VFWRYQQALYNNDSDL---PEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKWLPI 232
           +  R+  A   + + L   P   +P        +    ++L DK  +  ++         
Sbjct: 81  LAQRFIDAFMEDTTALGIEPATAHPRASQMIPDIIDFVQDLIDKEYAYAVDGDVYYRARK 140

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            K Y   +   +  D+L+    QH   I++D+  + +  PI   +   A+ G +      
Sbjct: 141 FKHYGELSHQNV--DELEEGASQH---ITQDELAKKE-DPIDFALWKAAKPGEISW---E 191

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P  K      ++    +  + ++GD  D      D  + +   ++A  + K ++ F   
Sbjct: 192 SPWGKGRPGWHIE--CSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEAKTDKQFVRY 249

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  H+G+V         + E                      KMSK  G+FIT+  
Sbjct: 250 WM-----HNGFVT--------IGEDD-------------------EKMSKSLGNFITVHD 277

Query: 413 VVDEVGSDSVRFMM 426
           +   V    +RF M
Sbjct: 278 IRKTVDPQVLRFFM 291


>gi|238855309|ref|ZP_04645627.1| leucine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664289|ref|ZP_05865142.1| leucyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282931921|ref|ZP_06337390.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472480|ref|ZP_07812972.1| leucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832079|gb|EEQ24398.1| leucine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529914|gb|EEQ68915.1| leucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260562175|gb|EEX28144.1| leucyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303951|gb|EFA96084.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +Y+ G++H+     Y +    V   +     K     L  + + L       KMSK  G+
Sbjct: 524 LYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLIL---KDHDKMSKSKGN 580

Query: 407 FITLRHVVDEVGSDSVR-FMMLWRKNSELLDFD 438
            +    V++E G+DS+R + M        +D+D
Sbjct: 581 VVNPDEVIEEYGADSLRTYEMFMGPLDASIDWD 613


>gi|229582044|ref|YP_002840443.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012760|gb|ACP48521.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 980

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L      + +K   ++VL+        D    +M K  G+++    V+ 
Sbjct: 488 GHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGF---MLDEQGREMHKSLGNYVEPSVVIQ 544

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D +R  +L     E   F +  ++   ++  + +  Y +A         + +   L
Sbjct: 545 RYGRDILRLWLLRNTTWEDARFSWRALELTKRDLQIIWNTYVFASMYMNLDNFEPVKYTL 604

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYD-LASV 531
           D  +    +                 L+ +  +++         + +++A YL + L   
Sbjct: 605 DDVIKYAKIEDLWI------------LSRFNSMLKKVNESMKNYKVHEMANYLINFLVED 652

Query: 532 FHGHW 536
               +
Sbjct: 653 VSRFY 657


>gi|54297257|ref|YP_123626.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|60390670|sp|Q5X5L8|SYL_LEGPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53751042|emb|CAH12453.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 823

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P  + +           +         K     +   P+G +H+GH R   +GD +A
Sbjct: 4   TYNPQEVEEQAQQYWHKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIA 63

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 64  RYQRALGKNV 73


>gi|319760182|ref|YP_004124120.1| valyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318038896|gb|ADV33446.1| valyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 964

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 56/215 (26%), Gaps = 33/215 (15%)

Query: 94  SPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +P  + + +      SG         +  +  I     N TG +H+GH     + D LA 
Sbjct: 7   NPKQIEESIYKFWEESGYFEPDITDFEKPRYCIMMPPPNITGALHLGHAFQQTIMDILAR 66

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
               +G  V     ++ AG     L        +  ++N              LK +   
Sbjct: 67  YNRMNGKNVLWRIGLDHAGIAAQILI-------ENKIFNQTKTPKNNDLKNSLLKEIWSW 119

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
                                         K+I   +K L        +           
Sbjct: 120 KEQTE-------------------------KLINYQIKRLGNSVSWTNTRFTMDPQMSFA 154

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +++    L +   +Y+G          Q    D +
Sbjct: 155 VKEAFIRLYQDNLIYKGKRLVNWDYKIQTAISDLE 189


>gi|296109503|ref|YP_003616452.1| glutamyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434317|gb|ADG13488.1| glutamyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 532

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 61/167 (36%), Gaps = 24/167 (14%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS----- 152
           + + ++             + +     I   + NP+GP+H+GH R AV+ D  A      
Sbjct: 50  IVEEVNKSFKGKRRGRELELPEVEDKVILRFAPNPSGPLHIGHARVAVLNDYFAKKYGGK 109

Query: 153 -LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
            ++ F   +  R           + +   + W   +     D ++ +     +Y KH G+
Sbjct: 110 FILRFEDTDPKRV-----LSEAYDMIREDLDWLNVKI----DEEVIQSDRLKIYYKH-GE 159

Query: 212 ELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLK 250
           EL     + +   P E++  +         +D  V+  +++    L 
Sbjct: 160 ELIKMGKAYVCECPPEEFRELRNKGIACPCRDREVEENLELWEKMLN 206


>gi|239993317|ref|ZP_04713841.1| isoleucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 939

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 19/222 (8%)

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV---DRPLLKSDGSYTYFAADL 338
               + E +    ++K  Q         L  S +   +       +    G   YF  D 
Sbjct: 492 ESAALMEKVAQEVEAKGIQAWWDLDDAALLGSELDNYEKVTDTLDVWFDSGVTHYFVVD- 550

Query: 339 AYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + +      +Y+ GSD   G+       + A+        VL         D   
Sbjct: 551 ----RRDDIPASADLYLEGSDQHRGWFMSSLMSSTAMHGHAPYKEVLTHGF---TVDAHG 603

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-----NPVF 452
            KMSK  G+ +  + V +++G+D +R  +        +      +K  +       N   
Sbjct: 604 RKMSKSVGNVVAPQEVTNKLGADILRLWVASTDYRGEIAVSDEILKRAADGYRRVRNTAR 663

Query: 453 YVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDT 493
           ++  A     S+    A++    LD  +  R    QE   + 
Sbjct: 664 FLL-ANLNGFSVEDAVAEEDMVALDRWIVARAKALQEELIEA 704


>gi|226939053|ref|YP_002794124.1| leucyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782503|sp|C1DA02|SYL_LARHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226713977|gb|ACO73115.1| Syl [Laribacter hongkongensis HLHK9]
          Length = 866

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R   +GD L+  MA  GY V
Sbjct: 42  PYPSGKLHMGHVRNYTIGDVLSRYMALKGYNV 73


>gi|226226714|ref|YP_002760820.1| cation efflux protein [Gemmatimonas aurantiaca T-27]
 gi|226089905|dbj|BAH38350.1| cation efflux protein [Gemmatimonas aurantiaca T-27]
          Length = 1088

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 55  RPLGLDP---LTIAELIVARIKIDPDVDSVFI---AGKGFINLYLSPSYLRKI 101
           +  G DP     +AE +   ++  P  D V I   AG+G++N+ L  + + + 
Sbjct: 710 KIFGDDPVITRQVAEQVAGVVRSVPGADEVQIEQTAGQGYLNVRLDRAAMARF 762


>gi|197334735|ref|YP_002155515.1| leucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690268|sp|B5FBK7|SYL_VIBFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197316225|gb|ACH65672.1| leucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 858

 Score = 39.9 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  L + +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDLEQKIQKHWDDNKTFVVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRY 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|325283179|ref|YP_004255720.1| Isoleucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314988|gb|ADY26103.1| Isoleucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 1091

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 47/206 (22%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  +  + A  NV+    +    D    KMSK  G+ +    + D+ 
Sbjct: 598 DQTRGWFYTLHAISTLLYGQPAYRNVISLGHIV---DEKGFKMSKSKGNVVAPLPLFDQY 654

Query: 418 GSDSVR-FMMLWRKNSELLDFDFCKVKEQSKEN-------PVFYVQYAYARCRSIFRQAK 469
           G+DSVR +M       +   F    V E  +           F+V YA            
Sbjct: 655 GADSVRWYMFTASDPGDQKRFSERLVGEAQRGFVSTLWNVYSFFVLYA------------ 702

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK--------L 521
                 + D    +  P  SE    +  L   L+     + + T A E +         L
Sbjct: 703 ------NLDKPDLSSAPAVSERPEMDRWL---LSRLEETVRDVTDALE-HYDARGGGQAL 752

Query: 522 AFYLYDLASVF-----HGHWSHGREN 542
           A ++ +L++ +        W+ G EN
Sbjct: 753 ATFVDELSNWYVRRSRSRFWTEGEEN 778


>gi|227827689|ref|YP_002829469.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584893|ref|YP_002843395.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511516|sp|C3N5S5|SYI_SULIA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511517|sp|C3MVH6|SYI_SULIM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|227459485|gb|ACP38171.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019943|gb|ACP55350.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 1049

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L      + +K   ++VL+        D    +M K  G+++    V+ 
Sbjct: 557 GHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGF---MLDEQGREMHKSLGNYVEPSVVIQ 613

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D +R  +L     E   F +  ++   ++  + +  Y +A         + +   L
Sbjct: 614 RYGRDILRLWLLRNTTWEDARFSWRALELTKRDLQIIWNTYVFASMYMNLDNFEPVKYTL 673

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYD-LASV 531
           D  +    +                 L+ +  +++         + +++A YL + L   
Sbjct: 674 DDVIKYAKIEDLWI------------LSRFNSMLKKVNESMKNYKVHEMANYLINFLVED 721

Query: 532 FHGHW 536
               +
Sbjct: 722 VSRFY 726


>gi|226331014|ref|ZP_03806532.1| hypothetical protein PROPEN_04944 [Proteus penneri ATCC 35198]
 gi|225201809|gb|EEG84163.1| hypothetical protein PROPEN_04944 [Proteus penneri ATCC 35198]
          Length = 606

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEDIEQTIQEHWEKNNTFKVTEDNNKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMQGKNV 73


>gi|145588420|ref|YP_001155017.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083136|sp|A4SVD9|SYL_POLSQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145046826|gb|ABP33453.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 890

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGDTLA 151
           +  +       + V    E   N  GK             P+G +H+GH R   + D +A
Sbjct: 10  IEAAAQADWERTQVYRVTENAVNASGKKKPKYYACSMLPYPSGKLHMGHVRNYTINDVMA 69

Query: 152 SLMAFSGYEV 161
             +   GY V
Sbjct: 70  RQLRMQGYNV 79


>gi|308186026|ref|YP_003930157.1| Leucyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056536|gb|ADO08708.1| Leucyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESRVQQHWDENETFKVTEQEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|304395664|ref|ZP_07377547.1| leucyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356958|gb|EFM21322.1| leucyl-tRNA synthetase [Pantoea sp. aB]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESRVQQHWDENETFKVTEQEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|269961585|ref|ZP_06175947.1| Glutamyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833626|gb|EEZ87723.1| Glutamyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 475

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  +R +
Sbjct: 61  MEWLGLEWNEGPYFQTQRFDRYNEMVDKL------LEEDKAYKC---YASKELLDEVRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +T +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEISNTQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|229579204|ref|YP_002837602.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228009918|gb|ACP45680.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 980

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L      + +K   ++VL+        D    +M K  G+++    V+ 
Sbjct: 488 GHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGF---MLDEQGREMHKSLGNYVEPSVVIQ 544

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D +R  +L     E   F +  ++   ++  + +  Y +A         + +   L
Sbjct: 545 RYGRDILRLWLLRNTTWEDARFSWRALELTKRDLQIIWNTYVFASMYMNLDNFEPVKYTL 604

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYD-LASV 531
           D  +    +                 L+ +  +++         + +++A YL + L   
Sbjct: 605 DDVIKYAKIEDLWI------------LSRFNSMLKKVNESMKNYKVHEMANYLINFLVED 652

Query: 532 FHGHW 536
               +
Sbjct: 653 VSRFY 657


>gi|148825859|ref|YP_001290612.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|187647723|sp|A5UBS8|SYM_HAEIE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148716019|gb|ABQ98229.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 66/215 (30%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDTPYFGFEIPGVKDKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D +    + SD   Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|145634394|ref|ZP_01790104.1| putative ATPase [Haemophilus influenzae PittAA]
 gi|145268374|gb|EDK08368.1| putative ATPase [Haemophilus influenzae PittAA]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|86357775|ref|YP_469667.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281877|gb|ABC90940.1| methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 516

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 35/325 (10%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G ++   A +     Q     
Sbjct: 16  PNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGIAPQALADR 75

Query: 192 NDSDLPEGYYP----GVYLKHVGKELADKYSSELLNFPEEKWLPIVKD-------YSVQA 240
           N  +                   +E   + S  + N   +    I KD          +A
Sbjct: 76  NSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMADNG-DIYKDSYAGWYSVRDEA 134

Query: 241 MMKIIRDDLKALNIQHD------IFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEG 289
             +    +L+A  +++        ++ E  +          ++ +               
Sbjct: 135 YYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHYEANPDFIGPAERRN 194

Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK----- 344
            +        +   + R    +   +  D      +  D    Y  A   Y + +     
Sbjct: 195 EVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYITA-TGYIEDRNGPRA 253

Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                D  ++++G D    + R  AV        A++ +        +      KMSK  
Sbjct: 254 KYWPAD--VHIIGKD----IIRFHAVYWPAFLMSAKLPLPQRVFAHGFLLNKGEKMSKSL 307

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWR 429
           G+ +   ++V+  G D VR+  L  
Sbjct: 308 GNVVDPVNLVNHFGLDQVRYFFLRE 332


>gi|39938627|ref|NP_950393.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|61216243|sp|Q6YR75|SYC_ONYPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39721736|dbj|BAD04226.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 438

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 117/358 (32%), Gaps = 59/358 (16%)

Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           + + +    E+          + +          +H+G+ R  +  DT+   +    +  
Sbjct: 4   IYNSLTRKKEFFNPAHPPQINMYV--CGPTVYNHLHLGNTRPLIFFDTVKRYLEMLNF-- 59

Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221
            R YY+                     + + D  + E       L+    +LA+KY    
Sbjct: 60  -RVYYV-------------------VNITDIDDKIIENALKNQVLEQ---DLANKYIKSF 96

Query: 222 LNFPEEKWLPI--VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
            N  +   +     K  + Q +  +I        +     + +   +  D   I   +  
Sbjct: 97  NNLLKTLNIQTINFKPQATQYINSMI--------VYIQTLLDQGFAYFTDQG-IYFRVSK 147

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLFRSTMVGDDVDRPLLKSDGSYTYFA 335
           +   G + +  L   K    ++ D  ++     +L++ T  G     P     G   +  
Sbjct: 148 IDDYGKLKKQDLSQLKQNARKQLDPQKEFPGDFILWKKTSQGITYPSPWFA--GRPGWHT 205

Query: 336 ADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
                 +  ++   D  I+  G+D     H   + +  A          ++      + R
Sbjct: 206 ECATMIEQLFKLPLD--IHGGGTDLKFPHHENEIAQTHA------HSHQKLANFFMHVER 257

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           L  D    KMSK  G+ I  + ++ +     ++ ++L     + ++F +  +++  ++
Sbjct: 258 L--DYQNQKMSKSLGNIIWCKDLLKQYNPCIIKLLILSTHYRKPINFSYDLMEQAQQK 313


>gi|88808557|ref|ZP_01124067.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
 gi|88787545|gb|EAR18702.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
          Length = 878

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 27/129 (20%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGDTL 150
              P  L +   S       Y       G            P+G +H+GH R  V+ D +
Sbjct: 19  RYDPIALEQRWQSQWQHDDLYATRSPEPGQNAFYALSMFPYPSGTLHMGHVRNYVITDVI 78

Query: 151 AS--------LMAFSGYE------------------VTREYYINDAGAQINTLALSVFWR 184
           A         ++   G++                  +  +  I    AQ++ L LS+ W 
Sbjct: 79  ARAQRMRGDAVLHPMGWDAFGLPAENAAIERQIDPGIWTDRNIEQMKAQLDRLGLSIDWS 138

Query: 185 YQQALYNND 193
            +QA  + D
Sbjct: 139 REQATCHAD 147


>gi|319947459|ref|ZP_08021691.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746399|gb|EFV98660.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 663

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 105/349 (30%), Gaps = 77/349 (22%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA       Y+V                 L    +  Q    
Sbjct: 14  PSGKLHIGSAYTTIACDVLARYKRMMNYDV------------FYLTGLDEHGQKIQQKAE 61

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                P+ Y  G         +  K   +LL+   +K++    DY  + + ++    L  
Sbjct: 62  EAGITPQAYVDG-------MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQ 114

Query: 252 LNI---QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +I   ++  + S  D      S + ++  +    G V  G+ P       +   +  + 
Sbjct: 115 DDIYLGEYSGWYSVSDEEFFTESQLAEVFRD--ENGKVIGGVAPS----GHEVEWVSEES 168

Query: 309 LLFRSTMVGD------DVDRPLLKSDGSYTYFAA--------DLAYFKCKYERGFD---- 350
              R +   D            +  DG               DLA  +  +  G      
Sbjct: 169 YFLRLSKYQDRLVEFFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSN 228

Query: 351 --NMIYVM-----------GSDHSGY--VKRLE--AVAAAVSEKKAQINVLLCELVRLYR 393
             +++YV            G     +    +     V   V +   + + +   ++ +  
Sbjct: 229 PRHVVYVWFDALLNYVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMML 288

Query: 394 D--------------GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           D                  KMSK  G+ I    +V+  G D +R+ ++ 
Sbjct: 289 DIKLPERLIGHGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMR 337


>gi|289551024|ref|YP_003471928.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180556|gb|ADC87801.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 916

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 85/520 (16%), Positives = 149/520 (28%), Gaps = 110/520 (21%)

Query: 28  ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87
           I   + I    +  +G  + N      +        IAE +   +    D D        
Sbjct: 237 IPSNVAITVHPELKYGQYNVNG-----KKY-----IIAEALADEVAEALDWDK------- 279

Query: 88  FIN-LYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMH--VGHCRC 143
             N + L   ++ K L  +        R +L+  G  V  +      TG +H   GH   
Sbjct: 280 --NHIKLEKEFMGKELEYVEAQHPFLDRVSLVINGNHVTTDAG----TGCVHTAPGHGED 333

Query: 144 A-VVGDTLASLMAFSGYEVTREYYINDAGA------QI-NTLALSVFWRYQQALYNNDSD 195
             +VG           Y +     +ND G       Q                L   D+ 
Sbjct: 334 DYIVGQK---------YGLPVISPLNDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKDAL 384

Query: 196 LPEGYYPGVYLKHV-------------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           L   +    Y                      +K   ++L+  EE    +    +    M
Sbjct: 385 LKLSFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETEFKVNWGKTRIYNM 444

Query: 243 KIIRDDL-----KALNIQHDIFISEDD---FHRGDPSPIRDIIDNL--------ARQGYV 286
              R +      +   +   +F +E+      +   + + D+ +            +  +
Sbjct: 445 IRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKETVNHVADLFEQYGSNVWFEREAKELL 504

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
            EG   P         + D   + F S               GS           + + E
Sbjct: 505 PEGFTHPGSPNGEFTKETDIMDVWFDS---------------GSSH-----RGVLENRPE 544

Query: 347 RGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             F   +Y  GSD   G+       A A   +     +L    V    DG   KMSK  G
Sbjct: 545 LSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEGKKMSKSLG 601

Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
           + I    VV + G+D  R  +        +     ++ +Q+ +         Y + R+  
Sbjct: 602 NVIVPDQVVKQKGADIARLWVSSTDYLADVRIS-DEILKQTSD--------VYRKIRNTL 652

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           R       D + D         ES+    +  L+  L E+
Sbjct: 653 RFMLGNVNDFNPDTDAV----LESDLLEVDRYLLNRLREF 688


>gi|281357939|ref|ZP_06244424.1| isoleucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315597|gb|EFA99625.1| isoleucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 1041

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +A A+ ++    NV++  LV L  +G   KMSKR  ++     VV+
Sbjct: 551 GLDQTRGWFYTLVVLATALFDRPPFKNVVVNGLV-LAENGQ--KMSKRLRNYPDPMVVVN 607

Query: 416 EVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKENPVFYV 454
             G+D+VR  ML  +   +E L F    VKE  +   +   
Sbjct: 608 TYGADAVRLFMLGSQVVRAEDLKFSEAGVKEVLRGIMIPMW 648


>gi|170731974|ref|YP_001763921.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254246337|ref|ZP_04939658.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688589|sp|B1JVG9|SYL_BURCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124871113|gb|EAY62829.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169815216|gb|ACA89799.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|302760033|ref|XP_002963439.1| hypothetical protein SELMODRAFT_141956 [Selaginella moellendorffii]
 gi|300168707|gb|EFJ35310.1| hypothetical protein SELMODRAFT_141956 [Selaginella moellendorffii]
          Length = 960

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +             +  +   +  K  +     N TG +H+GH     V DTL   
Sbjct: 6   NPALVEASWYEYWEKQGFFVADASSQKPKFVMVIPPPNVTGVLHIGHALMCAVEDTLTRW 65

Query: 154 MAFSGYEVTREYYINDAGA 172
               GYE      ++ AG 
Sbjct: 66  RRMKGYETLWVPGVDHAGI 84


>gi|262166296|ref|ZP_06034033.1| glutamyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026012|gb|EEY44680.1| glutamyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 474

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 61  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   ++  A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKAVNEAAKEGEPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|238919212|ref|YP_002932727.1| methionyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868781|gb|ACR68492.1| methionyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL +       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 199 DLPSFGAMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRDAPYFGFEIPDAPGKYFYV 258

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSD----GS----YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D    L   D    GS    Y +   D+ YF             
Sbjct: 259 WLDAPIGYMGSFRNLCDKRGDLNFDDYWGQGSDAELYHFIGKDIVYF------------- 305

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI  R  +
Sbjct: 306 -----HSLF---WPAMLEGSGFRKPS-NVFVHGYVTV----NGAKMSKSRGTFIQARTYL 352

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  D +R+    + +  + D D        + N
Sbjct: 353 NHLDPDCLRYYYTAKLSDRIDDIDLNLEDFVQRVN 387


>gi|268317598|ref|YP_003291317.1| isoleucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335132|gb|ACY48929.1| isoleucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 1077

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  +V++  LV    D    KMSK  G+ +    VV+
Sbjct: 569 GVDQTRGWFYTLHAIATMVMDSVAFRHVVVNGLV---LDEKGEKMSKSKGNVVDPFDVVE 625

Query: 416 EVGSDSVRFMMLWR 429
             G+D VR+ M+  
Sbjct: 626 RYGADPVRWYMISN 639


>gi|218288777|ref|ZP_03493040.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241135|gb|EED08311.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 1046

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++ AV+ K    NVL+   V    D    KMSK  G+ I      D+ 
Sbjct: 561 DQTRGWFYSLLAISTAVTGKAPYKNVLVLGHV---LDEHGKKMSKSKGNVIDPFEAFDKH 617

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G+D+VRF  +           + +   ++K   +  +Q  +           D F     
Sbjct: 618 GADAVRFYFVSNTQPWNSQLFYHRAVAEAKAKYIDLLQNIHQFYA--LYAGIDGFNPYKV 675

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +  P    P    +      LI  L +  + ++ A    +  + A  L          + 
Sbjct: 676 EHVPVAERPLMDRW------LIARLHQTIQGVDEAYHRYDATQAARLLQAFVDELSTWY- 728

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             R N    +     +      L L  A+ ++
Sbjct: 729 -VRRNRDRFWADGMEKDKVAAYLTLFEALKTV 759


>gi|206561710|ref|YP_002232475.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693126|sp|B4EEW1|SYL_BURCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|198037752|emb|CAR53696.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|191639246|ref|YP_001988412.1| cysteinyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239630171|ref|ZP_04673202.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|187631657|sp|Q035S0|SYC_LACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558712|sp|B3WA35|SYC_LACCB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190713548|emb|CAQ67554.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus casei BL23]
 gi|239527783|gb|EEQ66784.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327383326|gb|AEA54802.1| Cysteinyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386509|gb|AEA57983.1| Cysteinyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 468

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 110/314 (35%), Gaps = 58/314 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LS 180
                   +H+G+ R A+  DT+     + GY+VT      D   +I   A       L 
Sbjct: 28  CGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYKVTYVSNFTDVDDKIINAAHKTGEAPLD 87

Query: 181 VFWRYQQALYNNDSDL---PEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKWLPI 232
           +  R+  A   + + L   P   +P        +    ++L DK  +  ++         
Sbjct: 88  LAQRFIDAFMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAYAVDGDVYYRARK 147

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            K Y   +   +  D+L+    QH   I++D+  + +  PI   +   A+ G +      
Sbjct: 148 FKHYGELSHQNV--DELEEGASQH---ITQDELAKKE-DPIDFALWKAAKPGEISW---E 198

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P  K      ++    +  + ++GD  D      D  + +   ++A  + K ++ F   
Sbjct: 199 SPWGKGRPGWHIE--CSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEAKTDKQFVRY 256

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  H+G+V         + E                      KMSK  G+FIT+  
Sbjct: 257 WM-----HNGFVT--------IGEDD-------------------EKMSKSLGNFITVHD 284

Query: 413 VVDEVGSDSVRFMM 426
           +   V    +RF M
Sbjct: 285 IRKTVDPQVLRFFM 298


>gi|171463050|ref|YP_001797163.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692844|sp|B1XT72|SYL_POLNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171192588|gb|ACB43549.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 890

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 11/90 (12%)

Query: 72  IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131
           +  D D  S+  A +          +    +  +  + ++       K    ++      
Sbjct: 1   MSKDYDYRSIEAAAQ--------ADWEGAQVYQVAENAVDAQGKKKSKYYACSM---LPY 49

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
           P+G +H+GH R   + D +A  +   GY V
Sbjct: 50  PSGKLHMGHVRNYTINDVMARQLRMQGYNV 79


>gi|153835356|ref|ZP_01988023.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868127|gb|EDL67289.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 686

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 253

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G F+     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  + +R+    + NS + D D        + N
Sbjct: 348 NHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|307594840|ref|YP_003901157.1| leucyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550041|gb|ADN50106.1| leucyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 1013

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           RK        GI       GK     I       +G  H+GH R   +GD +A      G
Sbjct: 24  RKWQREWYEKGIFNADPKPGKPKYF-ITVPYPYVSGSPHIGHGRTFTIGDIIARYKRARG 82

Query: 159 YEV 161
           + V
Sbjct: 83  FNV 85


>gi|258404389|ref|YP_003197131.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796616|gb|ACV67553.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 886

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 34/191 (17%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           + L     +        +  G    +I     N TG +H+GH     + D L        
Sbjct: 18  RWLDHWRENQTFSPDAELEDGQPPYSIVIPPPNVTGTLHMGHALNLTLQDILCR------ 71

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y                        + ++ L+   +D        V  K + +E      
Sbjct: 72  YN---------------------RQKGKKVLWVPGTDHAGIATQNVVEKALAQE-----G 105

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           +       E ++  V  +  +   KI+   ++ +    D          G    +R++  
Sbjct: 106 TTRQELGREAFVERVWQWKEEYGGKILNQ-IQRMGASVDWSRLRFTMDEGLSRAVREVFV 164

Query: 279 NLARQGYVYEG 289
            L   G +Y+G
Sbjct: 165 QLYEDGLIYQG 175


>gi|225076903|ref|ZP_03720102.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
 gi|224951789|gb|EEG32998.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDERIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|254420718|ref|ZP_05034442.1| valyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186895|gb|EDX81871.1| valyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 909

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 23/186 (12%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           +  G    + +  ++                             L   STM   +    L
Sbjct: 441 YGPGGEIYVAETEEDARELAMADYDSEVALTQDEDVLDTWFSSALWPFSTMGWPEKTEDL 500

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
            +      Y  +DL             +I+         V R+  +     ++     V+
Sbjct: 501 ERF-----YPTSDLVTAAD--------IIFFW-------VARMMMMGLHFMDEVPFKRVI 540

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
           +  LV   RD    KMSK  G+ I    ++DE+G+D +RF M     +  +     +++ 
Sbjct: 541 INGLV---RDEKGQKMSKSKGNVIDPLGIIDELGADPLRFTMAILSGTRDIKLSKQRIEG 597

Query: 445 QSKENP 450
                 
Sbjct: 598 YRNFGT 603


>gi|107021731|ref|YP_620058.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688677|ref|YP_834300.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123245293|sp|Q1BZ70|SYL_BURCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230614|sp|A0K4I0|SYL_BURCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|105891920|gb|ABF75085.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646766|gb|ABK07407.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|313672434|ref|YP_004050545.1| leucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939190|gb|ADR18382.1| leucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 852

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 21/251 (8%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +      +      +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 4   NPQVIENKWQKVWEENKVFKVEKDNNKPKYYCLEMFPYPSGKIHMGHVRNYAIGDVISR- 62

Query: 154 MAFS-GYEVTREYYINDAGAQINTLALS-----VFWRYQQALYNNDSDLPEGYYPGVYLK 207
             F  G+ V      +  G      A+        W Y   + N    L +      + +
Sbjct: 63  YKFMKGFNVIHPMGWDAFGLPAENAAIKNKIHPAKWTYSN-IENMKMQLKKMGLSYDWDR 121

Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
            V     + Y          KW  ++     +  +   +  L+         ++ +    
Sbjct: 122 EVATCDPEYY----------KWEQMIFLQMYEKGLVYRKKSLQNWCNDCHTVLANEQVED 171

Query: 268 GDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL- 324
           G      DI++      + ++           T +      K L+ +   +G      + 
Sbjct: 172 GRCWRCGDIVEKKEINSWYFKITDYAEELLDWTYKLPGWPEKVLVMQRNWIGKSYGAEID 231

Query: 325 LKSDGSYTYFA 335
            K +G  T   
Sbjct: 232 FKVEGEPTTIT 242


>gi|302776862|ref|XP_002971572.1| hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]
 gi|300160704|gb|EFJ27321.1| hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]
          Length = 960

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +             +  +   +  K  +     N TG +H+GH     V DTL   
Sbjct: 6   NPALVEASWYEYWEKQGFFVADASSQKPKFVMVIPPPNVTGVLHIGHALMCAVEDTLTRW 65

Query: 154 MAFSGYEVTREYYINDAGA 172
               GYE      ++ AG 
Sbjct: 66  RRMKGYETLWVPGVDHAGI 84


>gi|255263257|ref|ZP_05342599.1| leucyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105592|gb|EET48266.1| leucyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 697

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 1/115 (0%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  ++   +          K     +E     P+G +H+GH R   +GD +A     +G+
Sbjct: 12  KWQTAWNEAETFKAVRDETKPKYYVLEMF-PYPSGRIHMGHVRNYTLGDVVARYKTSTGH 70

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
            V      +  G      A+++    +   Y+N  ++     P        +E A
Sbjct: 71  SVLHPMGWDAFGMPAENAAMAIGGHPKTWTYDNIEEMKRQMRPLGLSIDWSREFA 125


>gi|210623773|ref|ZP_03294033.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
 gi|210153355|gb|EEA84361.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
          Length = 807

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   +          +        +   P+G +H+GH R   +GD +A      GY
Sbjct: 12  KWQKTWKENNQYKMDTEQTEKPNYYTLEMFPYPSGKLHMGHVRNYSIGDVIARFKKMKGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|78780160|ref|YP_398272.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78713659|gb|ABB50836.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 918

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 57/209 (27%), Gaps = 33/209 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       S   +  N    G    I     N TG +H+GH     + D +       G
Sbjct: 19  EKKWQEKWESLKAFSPNPEDDGEPFCIVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLG 78

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V         G    ++A+      Q       SD             +G+   D++ 
Sbjct: 79  KNVLCLP-----GTDHASIAVQTILEKQLKSEGKTSD------------DIGR---DEFL 118

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
               N+ E+    IV               LK +    D         +     + +  +
Sbjct: 119 KRAWNWKEQSGGRIVSQ-------------LKRIGYSVDWTRERFTLDQKLNEAVVEAFN 165

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            L ++  +Y G         +Q    D +
Sbjct: 166 ILYKKNLIYSGEYLVNWCPESQSAVSDLE 194


>gi|13359132|dbj|BAB33299.1| valyl-tRNA synthetase [Staphylococcus aureus]
          Length = 120

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  V +G         K T   +     N TG +H+GH     + D +  +    G
Sbjct: 14  AGRYEEWVKNGYFKPSEDKSKETYTIV-IPPPNVTGKLHLGHAWDTTLQDIITRMKRMQG 72

Query: 159 YEV 161
           Y+ 
Sbjct: 73  YDT 75


>gi|319409376|emb|CBI83020.1| Leucyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 874

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +P    +   ++      +  +      K  +  +   P+G +H+GH R   +GD +A
Sbjct: 5   RYNPRAREQQWQAVWDERQIFQTSHDDGREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVA 64

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 65  RYKRAKGFNV 74


>gi|323345307|ref|ZP_08085530.1| isoleucine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093421|gb|EFZ35999.1| isoleucine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 1201

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  A  NV+   LV    D    KMSK  G+      ++ 
Sbjct: 717 GVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLV---LDAKGNKMSKHLGNVTDPFEMMS 773

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + G+D VRF M+      + L FD   V E  ++          F+  YA
Sbjct: 774 KYGADPVRFYMMTNSEPWDNLKFDPEGVDEVRRKFFGTLYNTYSFFALYA 823


>gi|323344601|ref|ZP_08084825.1| glutamate--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093871|gb|EFZ36448.1| glutamate--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 524

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 96/295 (32%), Gaps = 34/295 (11%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTGP+H+G  R A     L + +    +     + I D  +     
Sbjct: 20  MAERKVRVRF-APSPTGPLHIGGVRTA-----LYNYLFAHQHNGELVFRIEDTDSHRFVQ 73

Query: 178 ALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
               +    +++    ++       G   G Y +   +E+  +Y  +LL+  +       
Sbjct: 74  GAEEYIIESFKWLGIKFDEGVSF--GGQHGPYRQSERREIYKEYVQQLLDNGK------- 124

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILP 292
              +  A       D K     +  + S       +   + R         G  Y     
Sbjct: 125 ---AYIAFDTPEELDQKRNKTPNFQYDSHTRMQMRNSLTMDRSEWKQRIEDGEQYVVRFK 181

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDN 351
               +     D+ R ++  +S ++    D+ L K SD   TY    LA     +     +
Sbjct: 182 VEPGQEIHIHDLIRGEVTVKSDIID---DKVLYKSSDELPTYH---LANIVDDHLMEITH 235

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +I   G +          +  A              L+ L  +G   K+SKR GD
Sbjct: 236 VIR--GEEWLPSAPLHVLLYHAFGWDDTMPQFAHLPLL-LKPEGKG-KLSKRDGD 286


>gi|312891064|ref|ZP_07750588.1| Isoleucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296531|gb|EFQ73676.1| Isoleucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 1130

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 21/124 (16%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQIN----------VLLCELVR--LYRDGMPIKMSKR 403
           G D   G+   L A+A  +SE   ++           V    +V   L  D    KMSKR
Sbjct: 625 GVDQTRGWFFTLHAIAVMLSEASDEVKAVNTLVGNPGVAFKNVVSNGLVLDKNGNKMSKR 684

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQ 455
            G+ +     + + G+D+ R+ M+      + L F+   + E  ++          F+  
Sbjct: 685 LGNAVDPFETISKYGADAARWYMISNAAPWDNLKFNLEGLDEVRRKFFGTLYNTYSFFAL 744

Query: 456 YAYA 459
           YA  
Sbjct: 745 YANI 748


>gi|308177478|ref|YP_003916884.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744941|emb|CBT75913.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 829

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K L       +    +   +  +  ++     P+G +H+GH     +GD +A      GY
Sbjct: 19  KWLPVWDELKVFKPADDGSRERRYVLDMF-PYPSGDLHMGHAEAFAMGDVVARYWRLRGY 77

Query: 160 EVT 162
           +V 
Sbjct: 78  DVM 80


>gi|289423107|ref|ZP_06424922.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156438|gb|EFD05088.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 1041

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 12/112 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AV+  V+ K    NVL+ +LV    D    KMSK  G+ I    + D
Sbjct: 558 GIDQTRGWFYSLLAVSTFVTGKAPYKNVLVTDLV---LDKNGKKMSKSKGNTINPFEMFD 614

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQS-------KENPVFYVQYAYA 459
           + G D++R+ +L+       + FD   +KE         K    F+  YA  
Sbjct: 615 KYGVDALRWYLLYVSPPWTPIRFDEDGLKEIVSKFVGTLKNTYTFFTLYANT 666


>gi|284997892|ref|YP_003419659.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445787|gb|ADB87289.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 980

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L      + +K   ++VL+        D    +M K  G+++    V+ 
Sbjct: 488 GHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGF---MLDEQGREMHKSLGNYVEPSVVIQ 544

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D +R  +L     E   F +  ++   ++  + +  Y +A         + +   L
Sbjct: 545 RYGRDILRLWLLRNTTWEDARFSWRALELTKRDLQIIWNTYVFASMYMNLDNFEPVKYTL 604

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYD-LASV 531
           D  +    +                 L+ +  +++         + +++A YL + L   
Sbjct: 605 DDVIKYAKIEDLWI------------LSRFNSMLKKVNESMKNYKVHEMANYLINFLVED 652

Query: 532 FHGHW 536
               +
Sbjct: 653 VSRFY 657


>gi|229845332|ref|ZP_04465464.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811785|gb|EEP47482.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|226355830|ref|YP_002785570.1| methionine--tRNA ligase [Deinococcus deserti VCD115]
 gi|226317820|gb|ACO45816.1| putative Methionine--tRNA ligase (Methionyl-tRNA synthetase)
           (MetRS) [Deinococcus deserti VCD115]
          Length = 668

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 108/339 (31%), Gaps = 46/339 (13%)

Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT----- 176
              I++ +  P    H+GH    ++ D +      +G  VT     ++ G +I+      
Sbjct: 10  TTAIDYANGAP----HIGHVYEKILADAIVRYQRLAGKNVTFVMGTDEHGEKISKAAAKE 65

Query: 177 ----------LALSVFWRYQQALYNNDSDL-----PEGYYPGVYLKHVGKELADKYSSEL 221
                     L++  F      L  + S+               +     +  D Y +E 
Sbjct: 66  GLTPQALVDDLSVRAFKGLWDRLGISYSEFIRTTEGRHKRFVQDVLQRVYDSGDIYFAEY 125

Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIR-----DDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
                      V +  +      +R      D   L  + + F   + +       +R+ 
Sbjct: 126 EGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFRMEKYQEWLLGHLREN 185

Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336
            D +   GY  E +L   K           K  +     +  D D        +Y +F A
Sbjct: 186 PDLIQPSGYRNE-VLEMLKEPIGDLSISRPKNRVPWGVELPWDADHV------TYVWFDA 238

Query: 337 DLAYFKCKYERGFDNMI-----YVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
            L+Y      RG D  +     +V+G D    +      +  A      +  V+   +  
Sbjct: 239 LLSYLTPLVTRGVDESVSGLAWHVIGKDILKPHAVFWPTMLKAAGMPVYRKLVVHSHI-- 296

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           L  DG   KM K  G+ I    +V +   D++R+ ML  
Sbjct: 297 LAEDGR--KMGKSLGNAIDPEKLVADYPVDAIRYAMLRE 333


>gi|158424439|ref|YP_001525731.1| valyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158331328|dbj|BAF88813.1| Valyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 926

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      +   +     ++      +  L RD    KMSK  G+ I    ++++ G+D++
Sbjct: 536 FFWVARMMMMGLEFMDGEVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLINQYGADAL 595

Query: 423 RFMM 426
           RF +
Sbjct: 596 RFTL 599


>gi|156849147|ref|XP_001647454.1| hypothetical protein Kpol_1018p134 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118140|gb|EDO19596.1| hypothetical protein Kpol_1018p134 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1124

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 53/194 (27%), Gaps = 32/194 (16%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           S+    + + V          I       I     N TG +H+GH     + D+L     
Sbjct: 174 SWYDWWVKTGVFEPEFGPDGKIKPEGLFCIPAPPPNVTGALHIGHALTISIQDSLVRYYR 233

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G  V      + AG    ++                               V K++  
Sbjct: 234 MKGKTVLWLPGFDHAGIATQSV-------------------------------VEKQIWA 262

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
           K      ++  E ++  V ++  +     I++ +  L   +D               + +
Sbjct: 263 KEKKTRHDYGREAFISKVWEWK-EEYHNRIKNQIMKLGASYDWSREAFTLDPKLTDAVVE 321

Query: 276 IIDNLARQGYVYEG 289
               L   G +Y  
Sbjct: 322 AFVRLHDDGTIYRA 335


>gi|254253255|ref|ZP_04946573.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895864|gb|EAY69744.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 864

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|219851792|ref|YP_002466224.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546051|gb|ACL16501.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 419

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 128/389 (32%), Gaps = 71/389 (18%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  VV D LA  + ++G EV     I D   +I           +    ++ S  
Sbjct: 36  HLGHARTYVVFDVLAKYLRWTGKEVFYLQNITDVDDKIIN-----RANAENVSQHDLSRR 90

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E  Y    ++ +G +    Y+    + PE                  I + ++ L  + 
Sbjct: 91  FEIEYLRD-MRALGVDSVSYYARATTHIPE------------------IINQVERLISRG 131

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD--RKQLLFRST 314
             +++E   +          +      G +         S+ T +   +     L     
Sbjct: 132 AAYVTEGGVYFN--------VGTFEHNGELSHQHGTDRVSRITDETKQNSLDFALWKLGE 183

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD------NMIYVMGSDHSGYVKRLE 368
                 D P  +  G   +   D A  +  + + +D      ++I+        + +   
Sbjct: 184 FGEYTWDSPWGR--GRPGWHIEDTAISEKYFGQQYDIHGGGLDLIF-------PHHEAEI 234

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           A   ++  K   +   L       +     KMSK  G+FIT+R  +     D +R+ +L 
Sbjct: 235 AQMESLEGKHPMVRYWLHTGFLTVKG---EKMSKSLGNFITIRDALKTWNKDVLRYFILL 291

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD--------LDFDLF 480
              S  L     +  ++  +N    ++      R++ ++     P+        ++ DL 
Sbjct: 292 SHYSSPL-----QATDEGLDNAARALE----HIRAVAQKDTGENPEGRKAFTDAMESDLN 342

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVI 509
             N +        S   L +   E+  ++
Sbjct: 343 TPNALAAIQTLAASGDILALK--EFGEIL 369


>gi|146418705|ref|XP_001485318.1| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 565

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 22/189 (11%)

Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYV------YEGILPPPKSKTTQKCDMDR--KQL 309
           IF  E ++          +I+ L     +      Y+ IL   + +  +   + R   +L
Sbjct: 172 IFHEESNYFFRLSKFRDRLINYLKENPQLITPKNKYDSILAELEGEKLEDLSISRPSSRL 231

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--MIYVMGSDHSGYVKRL 367
           L+   + GDD  R  +  D    Y  A  A +             ++V+G D    + R 
Sbjct: 232 LWGIEVPGDDTQRIYVWFDALINYITA--AGYPKSLNAPTSPWPAVHVIGKD----IARF 285

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYR---DGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424
             +   +    A +  L  ++V       DG   KMSK  G+ +     +D  G D+ RF
Sbjct: 286 HCIYWPIFLMAADL-PLPKQIVIHSHWLCDG--FKMSKSLGNVVDPLDTLDYYGQDACRF 342

Query: 425 MMLWRKNSE 433
            +    N E
Sbjct: 343 FLSEYSNIE 351


>gi|61657325|emb|CAI44244.1| leucyl-tRNA synthetase [Thermotoga neapolitana]
          Length = 876

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 58  PQEIEEKWQKVWEEKGVFHTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 117

Query: 155 AFSGYEV 161
              GY V
Sbjct: 118 RMRGYNV 124


>gi|116754113|ref|YP_843231.1| leucyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694617|sp|A0B7B7|SYL_METTP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116665564|gb|ABK14591.1| leucyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 950

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G+ +      K   + I +   N  G +H GH R   +GD +A      G
Sbjct: 13  AKWQRIWEEEGVFHAEPDSRKKFFLTIPYPYLN--GNLHAGHTRTFTIGDAIARYHRMLG 70

Query: 159 YEV 161
             V
Sbjct: 71  ENV 73


>gi|83954544|ref|ZP_00963255.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83840828|gb|EAP79999.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 971

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 19/222 (8%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           + L      G+              +        G +H+GH     + D +       G+
Sbjct: 34  EWLERWEKIGVYDRLREKQGRKPFTLHDGPPYANGNLHIGHALNKTIKDMIVRSHQMMGF 93

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           +     YI         +   +  +Y+Q   + D D+P   +     K     +      
Sbjct: 94  DAR---YIPGWDCHGLPIEWKIEEQYRQKGRDKD-DVPINDFRAECRKFAAGWV------ 143

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             +   E K L I  +++   +      + + +  +   F+     ++G    +   ++ 
Sbjct: 144 -DVQREEFKRLGITGNWADPYLTMDFHAE-RVIAEEFMKFLMNGTLYQGSKPVMWSPVEK 201

Query: 280 --LARQGYVYEG-----ILPPPKSKTTQKCDMDRKQLLFRST 314
             LA     Y       I    K   T    +D   ++  +T
Sbjct: 202 TALAEAEVEYHDKESFTIWVKFKVVGTDDASLDGAHVVIWTT 243


>gi|229524211|ref|ZP_04413616.1| glutamyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229337792|gb|EEO02809.1| glutamyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 488

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 22  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 74

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 75  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 125

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 126 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 175

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 176 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 227

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 228 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 262


>gi|261341263|ref|ZP_05969121.1| leucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288316567|gb|EFC55505.1| leucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|222099493|ref|YP_002534061.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571883|gb|ACM22695.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 839

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 21  PQEIEEKWQKVWEEKGVFHTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 80

Query: 155 AFSGYEV 161
              GY V
Sbjct: 81  RMRGYNV 87


>gi|254225789|ref|ZP_04919394.1| glutamyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621695|gb|EAZ50024.1| glutamyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 509

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 43  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 95

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 96  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 146

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 147 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 196

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 197 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 248

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 249 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 283


>gi|114778439|ref|ZP_01453284.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551283|gb|EAU53841.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 818

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + ++   S + S +            +        P+G +H+GH R   +GD +A 
Sbjct: 10  IEAKWQQRWAESDMDSALNDDSREPYYCLVMF-----PYPSGNLHMGHVRNYCLGDAVAR 64

Query: 153 LMAFSGYEV 161
                GY V
Sbjct: 65  YKRMKGYNV 73


>gi|91215675|ref|ZP_01252645.1| putative valyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186141|gb|EAS72514.1| putative valyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 875

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 53/209 (25%), Gaps = 33/209 (15%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +           +  + + +    +I     N TG +H+GH     + D L       G
Sbjct: 12  AEQKWYSYWEKHNFFHSEVDEREPYSIVIPPPNVTGVLHMGHMLNITIQDVLVRRARLLG 71

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                           +  +++   +    L  +            +LKH   E  D Y 
Sbjct: 72  KNAC-------WVPGTDHASIATEAKVVAKLKADGIS-KADLSREDFLKH-AWEWTDDYG 122

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
             +LN                         LK L    D   ++          +     
Sbjct: 123 GRILNQ------------------------LKKLGASCDWERTKFTLDDNMYESVVQSFI 158

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +L  +G VY G          +    D +
Sbjct: 159 DLHNKGLVYRGYRMVNWDPEAKTTLSDEE 187


>gi|68250200|ref|YP_249312.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335378|sp|Q4QJZ5|SYM_HAEI8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68058399|gb|AAX88652.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 682

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|61657413|emb|CAI44328.1| leucyl-tRNA synthetase [Thermotoga sp. RQ7]
          Length = 839

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +    +      +      +  K     +   P+G +HVGH +  V+GD +A   
Sbjct: 21  PQEIEEKWQKVWEEKGVFHTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYK 80

Query: 155 AFSGYEV 161
              GY V
Sbjct: 81  RMRGYNV 87


>gi|323135807|ref|ZP_08070890.1| isoleucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398898|gb|EFY01417.1| isoleucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 1007

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 33/246 (13%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-------DVDRPLLKSDGSYTYFAAD- 337
           V   I+   + +             F +            DV      S  ++ +   D 
Sbjct: 552 VNARIVEAFEKEGADAWYETGAAARFLAPEYDPADYEKVSDVLDVWFDSGSTHAFVLDDP 611

Query: 338 -----LAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
                LA    K + G D ++Y+ GSD   G+       +     +     VL    V  
Sbjct: 612 ANFPALAGINRKRDGGADEVMYLEGSDQHRGWFHSSLLESCGTRGRAPYDAVLTHGFV-- 669

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
             D    KMSK  G+ +  + V+ + G+D +R  +     ++ L      +K   +    
Sbjct: 670 -LDEKGRKMSKSLGNVVAPQKVIADSGADILRLWVAASDYADDLRVGPEILKTFVEL--- 725

Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIE 510
                 Y + R+  R    +     ++      +    E +    +L++H L E    + 
Sbjct: 726 ------YRKLRNTLRWM--LGTLAHYESGDDAALEHAGELE----RLMLHRLVEMDAAVR 773

Query: 511 NATIAQ 516
           +A  A 
Sbjct: 774 SAYAAF 779


>gi|295096606|emb|CBK85696.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|301095003|ref|XP_002896604.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108922|gb|EEY66974.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 885

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K         +        K       F    P+G +H+GH R   + D +A      G
Sbjct: 27  AKWQKRWAQQELCSPSPNKKKPYYCLSMF--PYPSGQLHIGHVRVYTISDCMARFKRMQG 84

Query: 159 YEV 161
           Y+V
Sbjct: 85  YDV 87


>gi|261211336|ref|ZP_05925624.1| glutamyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839291|gb|EEX65917.1| glutamyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 474

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 61  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|156975200|ref|YP_001446107.1| methionyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156526794|gb|ABU71880.1| hypothetical protein VIBHAR_02927 [Vibrio harveyi ATCC BAA-1116]
          Length = 661

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 169 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEENKFFYV 228

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K   +  Y +   D+ YF             
Sbjct: 229 WLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYF------------- 275

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G F+     +
Sbjct: 276 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKASTYL 322

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
             +  + +R+    + NS + D D        + N
Sbjct: 323 KHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 357


>gi|31544361|ref|NP_852939.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541205|gb|AAP56507.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930403|gb|ADC30342.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 590

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 16/147 (10%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + +    +             I + S NP    H+GH    ++GD LA      GY+V 
Sbjct: 1   MNKINKDEQTMLKNKKCYISTPIYYASGNP----HIGHAYTTILGDFLARFKKQRGYDVF 56

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
                ++ G +I T A S+    Q+ +    S   E +           +L +   +  +
Sbjct: 57  FLSGTDEFGKKIETKAKSLNLTPQKMVDQYSSKFKELF-----------DLLNIELTRFV 105

Query: 223 NFPEEKWLPIVKD-YSVQAMMKIIRDD 248
              E K   +VK  + +  + K I  D
Sbjct: 106 RTTEPKHQEVVKKIFGLFYLKKYIYLD 132


>gi|85058781|ref|YP_454483.1| leucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738978|sp|Q2NUU7|SYL_SODGM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|84779301|dbj|BAE74078.1| leucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 860

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESTVQQHWHENDTFKVTEDPCKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|27467786|ref|NP_764423.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|39932185|sp|Q8CSX1|SYI_STAES RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27315330|gb|AAO04465.1|AE016746_255 Ile-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|329736328|gb|EGG72600.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 916

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|15806450|ref|NP_295156.1| methionyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|25009407|sp|Q9RUF3|SYM_DEIRA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|6459194|gb|AAF11005.1|AE001988_1 methionyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 681

 Score = 39.9 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 61/336 (18%), Positives = 111/336 (33%), Gaps = 46/336 (13%)

Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180
           I++ +  P    H+GH    ++ D +A     +G +VT     ++ G +I+  A      
Sbjct: 26  IDYANGTP----HIGHVYEKILADAIARYQRLAGRDVTFVMGTDEHGEKISKAAAKGGVT 81

Query: 181 -------VFWRYQQALYNN---DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
                  +  R  Q L+       D         + K+V   L   Y +  + F E + L
Sbjct: 82  PQELVDDLSERAFQGLWKKLGISYDFFIRTTSAKHKKYVQDVLQRVYDAGDIYFAEYEGL 141

Query: 231 PIVKDYSVQAMMKIIR-----------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
             V         +++             D   L  + + F +   +       ++   D 
Sbjct: 142 YSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFNMQKYQPWLLETLQQNPDL 201

Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339
           +   GY  E +L   K           K  +     +  D D        +Y +F A L+
Sbjct: 202 IQPAGYRNE-VLEMLKEDIGPLSISRPKARVPWGIELPWDTDHV------TYVWFDALLS 254

Query: 340 YFKCKYERGFD-----NMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
           Y      +G D        +V+G D    +      +  A      +  V+   +  L  
Sbjct: 255 YLTPLVSQGQDASMSGKAWHVIGKDILKPHAVFWPTMLRAAGLPLYRRLVVHSHI--LAE 312

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           DG   KM K  G+ I    +V     D++R+ +L  
Sbjct: 313 DGR--KMGKSLGNAIDPEELVAAWPVDAIRYALLRE 346


>gi|319401513|gb|EFV89723.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 916

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|319639015|ref|ZP_07993773.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399919|gb|EFV80582.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 936

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +             +  +      K     +   P+G +H+GH R   +GD L+   
Sbjct: 7   PAAIEPAAQKKWDDERIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFK 66

Query: 155 AFSGYEVT 162
             +G+ V 
Sbjct: 67  RLNGFNVM 74


>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 465

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 117/373 (31%), Gaps = 56/373 (15%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI----NTLALSVFWRYQQALYN 191
           +H+G+ R  +V DTL     + GYEV       D   ++    N   ++VF   ++ +  
Sbjct: 35  IHIGNARPLIVFDTLRRYFEYKGYEVIYIQNFTDVEDKMINRANKEGITVFELAKRFIE- 93

Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
                        Y K   +    + +       E +         +  + ++I     A
Sbjct: 94  ------------EYYKDADRLNVKRATKNPRATEEIED-------MIALIQRLIDKGY-A 133

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +  D++     F        ++I + +A       G    P  K     D     L  
Sbjct: 134 YVVDGDVYFRTRKFAEYGKLSHKNIEELMA-------GARVDPNEKKEDPLDF---ALWK 183

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371
                      P  +    +    + +A    KY       I +            E   
Sbjct: 184 AKKEGEPAWSSPWGEGRPGWHIECSVMA---MKY---LGETIDIHAGGQDLIFPHHENEI 237

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
           A       +       L   Y      KMSK  G+F T+R ++++   +++R  ML    
Sbjct: 238 AQSEAATGKPFARFW-LHNGYVSINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHY 296

Query: 432 SELLDFDFCKVKEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482
            + L+F    +++            EN  F +Q A +       +  D       DL  +
Sbjct: 297 RKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSS-----ENDDKLKAAIEDLKAK 351

Query: 483 NVIPQESEFDTSE 495
            +   E + +T+E
Sbjct: 352 FIEAMEDDLNTAE 364


>gi|304313869|ref|YP_003849016.1| leucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587328|gb|ADL57703.1| leucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 938

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 34/260 (13%)

Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKII 245
           D    EG    +Y       +       ++   E++W     D   + +       MKII
Sbjct: 410 DELKSEGLADEMYEFAERPVICRCGGRCVVRLMEDQWFMKYSDEEWKEVAHRCLSSMKII 469

Query: 246 RDDLKALNIQHDIFI--SEDDFHRGDPSPI----RDIIDNLARQGYVYEGILPPPKSKTT 299
            ++++A    +  ++         G  + +    R II+ L              K +  
Sbjct: 470 PEEVRANFQYYIDWLNDWACSRRIGLGTRLPWDERWIIEPLTDSTIYMAYYTIAHKLRGM 529

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
               +D +   F S  +G+      L+ + SY Y           +     ++I      
Sbjct: 530 DPEKLDDE--FFDSVFLGETGAGDELREEFSYWYPLD--------WRLSAKDLI-----G 574

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +          A     +  +  V+    +         KMS   G+ I LR  ++  G+
Sbjct: 575 NHLTFHIFHHSAIFPESRWPRGVVVFGMGLLEGN-----KMSSSKGNVILLRDAIERHGA 629

Query: 420 DSVRFMMLWRKNSELLDFDF 439
           D VR + L        DFD+
Sbjct: 630 DVVR-LFLMSSAEPWQDFDW 648



 Score = 37.6 bits (86), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +GI +      +   + + +    P+G MH+GH R   V D  A      GY
Sbjct: 6   KWRDKWRDAGIFHADPDDREKIFLTVAY--PYPSGAMHIGHGRTYTVPDVYARFKRMQGY 63

Query: 160 EV 161
            V
Sbjct: 64  NV 65


>gi|281366294|ref|NP_648837.2| CG5414 [Drosophila melanogaster]
 gi|272455213|gb|AAF49539.2| CG5414 [Drosophila melanogaster]
          Length = 941

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 83/230 (36%), Gaps = 30/230 (13%)

Query: 348 GFDNM--IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G D +  +Y+ G D  +G+ +    ++ A  E      + +        D    KMSK  
Sbjct: 578 GKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGF---TVDEKGYKMSKSL 634

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I+ + +  + G+D++R+ +       +      K+ +Q+ EN          + R  
Sbjct: 635 GNVISPKQITKKYGTDALRWWVASHGTQHMSITVSDKLLQQAAEN--------LCKIRGT 686

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R  K +  +          + + S+       L+  L E+   +E    A E  ++   
Sbjct: 687 MRYLKGVIGE----KQSGEKLIRTSDKSYLNRYLLSQLVEFESEVEKLYQAYEYNRVVAC 742

Query: 525 LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + +A+     + H     + R    ++ +L         A+   +   
Sbjct: 743 VQNFIANQVSAVYVH---LIKDRLYCGDDHEL--------LAIRQTLTHC 781


>gi|239916022|gb|ACS34699.1| MIP10137p [Drosophila melanogaster]
          Length = 946

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 83/230 (36%), Gaps = 30/230 (13%)

Query: 348 GFDNM--IYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G D +  +Y+ G D  +G+ +    ++ A  E      + +        D    KMSK  
Sbjct: 583 GKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGF---TVDEKGYKMSKSL 639

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           G+ I+ + +  + G+D++R+ +       +      K+ +Q+ EN          + R  
Sbjct: 640 GNVISPKQITKKYGTDALRWWVASHGTQHMSITVSDKLLQQAAEN--------LCKIRGT 691

Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524
            R  K +  +          + + S+       L+  L E+   +E    A E  ++   
Sbjct: 692 MRYLKGVIGE----KQSGEKLIRTSDKSYLNRYLLSQLVEFESEVEKLYQAYEYNRVVAC 747

Query: 525 LYD-LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           + + +A+     + H     + R    ++ +L         A+   +   
Sbjct: 748 VQNFIANQVSAVYVH---LIKDRLYCGDDHEL--------LAIRQTLTHC 786


>gi|229507709|ref|ZP_04397214.1| glutamyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229512096|ref|ZP_04401575.1| glutamyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229513858|ref|ZP_04403320.1| glutamyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229519231|ref|ZP_04408674.1| glutamyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229528781|ref|ZP_04418171.1| glutamyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229607213|ref|YP_002877861.1| glutamyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|229332555|gb|EEN98041.1| glutamyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229343920|gb|EEO08895.1| glutamyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229349039|gb|EEO13996.1| glutamyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229352061|gb|EEO17002.1| glutamyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355214|gb|EEO20135.1| glutamyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229369868|gb|ACQ60291.1| glutamyl-tRNA synthetase [Vibrio cholerae MJ-1236]
          Length = 488

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 22  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 74

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 75  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 125

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 126 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 175

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 176 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 227

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 228 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 262


>gi|188583889|ref|YP_001927334.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347387|gb|ACB82799.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 522

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 115/407 (28%), Gaps = 48/407 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV------FWRY 185
           P G  H+GH    +  D +A      G EV      ++ G +I   A         F   
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGREVLFTTGTDEHGLKIQQTAAKAGVTPRAFVDD 79

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
               +   +D  +  Y   +++    +                 + + K     ++    
Sbjct: 80  MAGRFKAVADRLDCAYDR-FIRTTEPDHYAAAQELWRRMEANGDIYLAKYAGWYSVRDEA 138

Query: 246 RDDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
             D     +  D             ++ E+++          ++   A Q       L P
Sbjct: 139 YYDEAETVLAPDGSRRSAKTDTPVEWMEEENYLFRLSKYQEPLLKLYAEQ----PDFLAP 194

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN-- 351
                     +         +    D   P+    G   Y   D A        GF +  
Sbjct: 195 ETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVD-ALTNYLTVTGFPDAG 253

Query: 352 ---------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                     ++++G D    + R  AV   A  +S        +      L R     K
Sbjct: 254 APNARFWPASLHIIGKD----IVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG---EK 306

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQYAY 458
           MSK  G+ +    +V   G D VR+ +L         ++D   +  +   +    +    
Sbjct: 307 MSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGGDGNYDHEAIINRINADLANDLGNLA 366

Query: 459 ARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
            R  S+  +     +    DF      ++   +        L+ +LA
Sbjct: 367 QRSLSMIAKNCDGAVPEPGDFTEADARLLAAAAALPEKARGLMQNLA 413


>gi|153825317|ref|ZP_01977984.1| glutamyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149741001|gb|EDM55070.1| glutamyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 509

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 43  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 95

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 96  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 146

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 147 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 196

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 197 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 248

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 249 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 283


>gi|146300033|ref|YP_001194624.1| valyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146154451|gb|ABQ05305.1| valyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 877

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 57/215 (26%), Gaps = 34/215 (15%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
                +        +    Y  +     T   I     N TG +H+GH     + D L  
Sbjct: 7   FDAKTIESKWYDYWMKN-NYFHSEPDHRTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIR 65

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G+        + A   I T A  V     + +  ND           +LKH   E
Sbjct: 66  RARLKGFNACWVPGTDHA--SIATEAKVVAKLKAEGINKNDLT------REEFLKH-AWE 116

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             DKY   +L                          LK L    D   ++        + 
Sbjct: 117 WTDKYGGTILEQ------------------------LKKLGASCDWERTKFTMDPDMSAS 152

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           +     +L  +G +Y G          +    D +
Sbjct: 153 VIKSFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEE 187



 Score = 37.6 bits (86), Expect = 6.3,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 82/244 (33%), Gaps = 37/244 (15%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGD 269
           EL       +L   E K  P   + +    +  IRD     NI   ++  +    ++ GD
Sbjct: 364 ELVKPAIKSVLETGEIKLHPKRFENTYAHWLNNIRD----WNISRQLWWGQQIPAYYYGD 419

Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQ-KCDMDRKQLLFRS-----TMVGDDVDRP 323
                 + +N+     + +      +  T   K D+D     F S     ++ G  +D  
Sbjct: 420 GKEDFVVAENIEDALKLAQAKTNNKQLTTDNLKQDVDALDTWFSSWLWPMSVFGGIMDPE 479

Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--KKAQI 381
               D  Y Y   DL                V G D   +      + A      +K   
Sbjct: 480 --SPDFKYYYPTNDL----------------VTGPD-ILFFWVARMIIAGYEYAGEKPFT 520

Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFC 440
           NV L  LV   RD    KMSK  G+      ++D+  +D VR  ++L       + FD  
Sbjct: 521 NVYLTGLV---RDKKRRKMSKSLGNSPDPLDLIDKFSADGVRVGLLLSASAGNDIMFDEE 577

Query: 441 KVKE 444
              +
Sbjct: 578 LCSQ 581


>gi|15642212|ref|NP_231845.1| glutamyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121726576|ref|ZP_01679825.1| glutamyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147675108|ref|YP_001217731.1| glutamyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153213798|ref|ZP_01949006.1| glutamyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153817099|ref|ZP_01969766.1| glutamyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153820833|ref|ZP_01973500.1| glutamyl-tRNA synthetase [Vibrio cholerae B33]
 gi|153829349|ref|ZP_01982016.1| glutamyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|227082338|ref|YP_002810889.1| glutamyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254286477|ref|ZP_04961434.1| glutamyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254849344|ref|ZP_05238694.1| glutamyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|9656771|gb|AAF95358.1| glutamyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121631029|gb|EAX63408.1| glutamyl-tRNA synthetase [Vibrio cholerae V52]
 gi|124115722|gb|EAY34542.1| glutamyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|126512367|gb|EAZ74961.1| glutamyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126521625|gb|EAZ78848.1| glutamyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146316991|gb|ABQ21530.1| glutamyl-tRNA synthetase [Vibrio cholerae O395]
 gi|148875190|gb|EDL73325.1| glutamyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|150423426|gb|EDN15370.1| glutamyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227010226|gb|ACP06438.1| glutamyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227014110|gb|ACP10320.1| glutamyl-tRNA synthetase [Vibrio cholerae O395]
 gi|254845049|gb|EET23463.1| glutamyl-tRNA synthetase [Vibrio cholerae MO10]
          Length = 509

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 43  APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 95

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 96  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 146

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 147 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 196

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 197 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 248

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 249 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 283


>gi|57866707|ref|YP_188341.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|81819412|sp|Q5HPZ9|SYI_STAEQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57637365|gb|AAW54153.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 916

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|329889452|ref|ZP_08267795.1| valyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844753|gb|EGF94317.1| valyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 1163

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 28/282 (9%)

Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234
             +A +    + + +      +P G   GV ++    +     +  +     +       
Sbjct: 349 AIVARAEEEGWLREIEKTKHMVPHGDRSGVVIEPWMTDQWYVDAKVMAQPALKAVEDGAT 408

Query: 235 DYSVQAMMKIIRDDLKALN---IQHDIFISED---DFHRGDPSPIRDIIDNLARQGYVYE 288
            +  ++  KI  + L+ +    I   ++        +       + +  ++   Q     
Sbjct: 409 VFEPKSYEKIYFEWLRNIEPWCISRQLWWGHRIPAWYGPNGEIYVAETEEDAREQAMSDY 468

Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348
                               L   STM   +    L +      Y  +DL          
Sbjct: 469 DSEVVLTQDEDVLDTWFSSALWPFSTMGWPEKTEDLERF-----YPTSDLVTAAD----- 518

Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
              +I+         V R+  +     + +     ++     L RD    KMSK  G+ I
Sbjct: 519 ---IIFFW-------VARMMMMGIHFMDGEVPFKRVIING--LVRDEKGQKMSKSKGNVI 566

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
               ++DE+G+D +RF M     +  +     +++       
Sbjct: 567 DPLGIIDELGADPLRFTMAILSGTRDIKLSKQRIEGYRNFGT 608


>gi|296103393|ref|YP_003613539.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057852|gb|ADF62590.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 860

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|262277794|ref|ZP_06055587.1| leucyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224897|gb|EEY75356.1| leucyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 851

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
             +PS + K           +  +      K     +   P+G +H+GH R   +GD +A
Sbjct: 5   KFNPSVVDKKWQEYWDKNKVFQASKSKDKPKYYCLEMFPYPSGKIHMGHVRNYTLGDVIA 64

Query: 152 SLMAFSGYEV 161
           +     G+ V
Sbjct: 65  NYKRLRGFNV 74


>gi|70606212|ref|YP_255082.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363440|sp|Q4JBP0|SYL1_SULAC RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA
           ligase 1; Short=LeuRS 1
 gi|68566860|gb|AAY79789.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 942

 Score = 39.9 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 54/172 (31%), Gaps = 16/172 (9%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +L+   +      +  S   Y  ++     K  I         P+H+GH R  +  D  A
Sbjct: 3   FLNE--IASKWQKVWDSERVYEADVDRTKEKKFITVAFPYTNSPLHIGHGRTYITADIYA 60

Query: 152 SLMAFSGYEV----------TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201
             +   GY V          T    I DA  + +   +S F    Q      S   +  Y
Sbjct: 61  RYLRMKGYNVLFPFAFQFTGTPILSIADAVKRGDEEIISTFTNVYQIPIGVISKFSDPSY 120

Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
              Y K   +  A       L+    +    + D + +  ++     L+ + 
Sbjct: 121 LSAYFKEDMRNTALTLG---LSIDRRREFTTI-DPAFERFVQWQYKRLQEIG 168


>gi|307243131|ref|ZP_07525305.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493491|gb|EFM65470.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 806

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 22/62 (35%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G            K     +   P+G +H+GH R   +GD +A      GY
Sbjct: 12  KWQKAWDEKGQYKMDTRDTSKPKYYCLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMQGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|284931170|gb|ADC31108.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 597

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 16/147 (10%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
            + +    +             I + S NP    H+GH    ++GD LA      GY+V 
Sbjct: 1   MNKINKDEQTMLKNKKCYISTPIYYASGNP----HIGHAYTTILGDFLARFKKQRGYDVF 56

Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222
                ++ G +I T A S+    Q+ +    S   E +           +L +   +  +
Sbjct: 57  FLSGTDEFGKKIETKAKSLNLTPQKMVDQYSSKFKELF-----------DLLNIELTRFV 105

Query: 223 NFPEEKWLPIVKD-YSVQAMMKIIRDD 248
              E K   +VK  + +  + K I  D
Sbjct: 106 RTTEPKHQEVVKKIFGLFYLKKYIYLD 132


>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 500

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 63/319 (19%), Positives = 109/319 (34%), Gaps = 46/319 (14%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  V  DT+   + + GY+V       D   +I      +    ++ L  +   
Sbjct: 35  IHLGNARPLVFFDTVRRYLIYKGYQVLYVQNFTDIDDKI------IKRAAEEKLDPSALA 88

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                Y   Y             +  LN       P V D+     M  I + ++ L  +
Sbjct: 89  FK---YTEEYYID----------ATSLNVMMADIHPKVSDH-----MAEIIELVEKLVQK 130

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
              + S+ D +      +R   D     G   E +L   + +  +K        L+++  
Sbjct: 131 GFAYQSDGDVYF----EVRRFKDYGKLSGRALEDMLAGARVEVNEKKRDPMDFALWKAAK 186

Query: 316 VGDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEA 369
            G+   + P     G   +     A         FD      G+D     H   + + EA
Sbjct: 187 PGEPSWNSPW--GQGRPGWHIECSAMSLKYLGENFDMHG--GGADLIFPHHENEIAQSEA 242

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              A  E  A+  +    +          KMSK  G+F  +R ++D+   + VRF +L  
Sbjct: 243 ---ATGEPLARYWLHNGFITV-----NQEKMSKSLGNFFLVREILDKFSPEVVRFFLLGT 294

Query: 430 KNSELLDFDFCKVKEQSKE 448
                LDFD  K+    K 
Sbjct: 295 HYRSPLDFDDEKLAVVEKG 313


>gi|297544234|ref|YP_003676536.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842009|gb|ADH60525.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 879

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 42/249 (16%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      +  K+     +L     L 
Sbjct: 470 TQDLKYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFM--KEVPFKHVLIHG--LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V+++ G+D++RF ++        D  F + K +   N  F
Sbjct: 519 RDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGN-DMRFSQDKVELSRN--F 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A    +         D D +L+   +   +             L  Y  +++  
Sbjct: 576 ANKLWNASRYVLLN-----LTDNDTNLYTDGLTIADKWI----------LTRYNNIVKEV 620

Query: 513 TIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           T   E ++L   A  LYD   S F   +      P L       +K+T   L        
Sbjct: 621 TENLEKFELGIAATKLYDFVWSEFCDWY-IELSKPVLYSDNLEAKKVTKSVL------RY 673

Query: 569 IINSGLNII 577
           ++++ L ++
Sbjct: 674 VLDNTLRLL 682


>gi|206891188|ref|YP_002249023.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206743126|gb|ACI22183.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 868

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           K  +  + + +        K     +E     P+G +H+GH R   +GD +A 
Sbjct: 13  KWQNEWLKNKLFEVNEDSSKQKFYCLEMF-PYPSGRIHMGHVRNYAIGDVIAR 64


>gi|254436724|ref|ZP_05050218.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252170|gb|EDY76484.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 770

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   +          K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQAAWDKAETFKATRSDDKPKYYVLEMF-PYPSGRIHIGHVRNYTMGDVIARYKLATG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|153834475|ref|ZP_01987142.1| glutamyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148869171|gb|EDL68203.1| glutamyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 475

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 94/279 (33%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +   +        + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KNQGGEFVLR--IED--TDLERNSQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          E+ DK         E+K       Y+ + ++  +R +
Sbjct: 61  MEWLGLEWNEGPYFQTQRFDRYNEMVDKL------LEEDKAYKC---YASKELLDEVRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
            +A          E   +  +   I+   +  A+ G         PK  +    D  R +
Sbjct: 112 QEA--------NKEMPRYDANHPKIKAANEA-AKDGDPCVIRFRNPKEGSVVFDDQIRGR 162

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +   +T +    D  + ++DGS TY   +       ++ G  ++  V G DH     R  
Sbjct: 163 IEISNTQMD---DLIIRRTDGSPTY---NFCVVVDDWDMGITHV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+              + L  DG   K+SKR G  
Sbjct: 215 NIYEALGAPVPTFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|119873138|ref|YP_931145.1| isoleucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674546|gb|ABL88802.1| Isoleucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 977

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQ 445
           L  D    KMSK  G+ I  + + ++ G+D VR +++L     E L FD  +VK  
Sbjct: 593 LILDKYGQKMSKSRGNVIWAKDLFEKYGADPVRLYILLKAAPWEDLAFDPDEVKMA 648



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 48/168 (28%), Gaps = 18/168 (10%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM-HVGHCRCAVVGDTLAS 152
           +P  +   +         + +    +G  +         T  M HVGH R     D +  
Sbjct: 13  NPHKVETAVLEFWDKNRIFEKWKTWRGGPIFAFLEGPPTTNGMPHVGHIRGRTYKDVVLR 72

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                GY+V  +        Q   +   V  R  +     + +L    Y          +
Sbjct: 73  FYRLLGYDVWPQ---GGWDMQGMPVEWEVEKR-LKLKSKKEVEL----YGLEQFAKECNK 124

Query: 213 LADKYSSELLN---------FPEEKWLPIVKDYSVQAMMKIIRDDLKA 251
           L D+Y +                +      +   ++ + ++I+   + 
Sbjct: 125 LVDEYLAYWREWGTRRLGLWLDIDNAYETRRPAYIEYVWRVIKRAYER 172


>gi|256027633|ref|ZP_05441467.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A +      +VL    V    DG   KMSK  G+ ++  
Sbjct: 562 LYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVN---DGEGRKMSKSLGNTVSPA 618

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R         + +      +K+ S+         AY R R+  R    +
Sbjct: 619 DVIKVYGADILRLWCGSVDYRDDVRISDNILKQMSE---------AYRRIRNTAR--YIL 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               DF+    + +P +   +  +  L   L    R +  +    E
Sbjct: 668 GNSYDFN-PKTDKVPYKDMLEIDKWAL-NKLEVLKRSVTESYDKYE 711


>gi|145592190|ref|YP_001154192.1| isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283958|gb|ABP51540.1| Isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 980

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 14/167 (8%)

Query: 91  LYLSPSY----LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM-HVGHCRCAV 145
             LSPSY    + K +         + +    +G  V         T  M HVGH R   
Sbjct: 6   FKLSPSYNSHAVEKAVQEFWDRNKIFDKWKSWRGRPVYAFLEGPPTTNGMPHVGHIRGRT 65

Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD---LPEGYYP 202
             D +       GY+V  +        Q   +   V  +  +     D +   L +    
Sbjct: 66  YKDVVLRFHRLLGYDVWVQ---GGWDMQGMPVEWEV-EKKLKLRSKKDVEQYGLEKFALE 121

Query: 203 GVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRD 247
              L     +   ++ +  L      E      +   ++   ++++ 
Sbjct: 122 CNALVEEYLQYWREWGTRRLGLWLDLENAYETRRPRYLEYAWRVVKR 168



 Score = 38.4 bits (88), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
           L  D    KMSK  G+ +  + + ++ G+D VR  +L +    E L FD  +V+
Sbjct: 596 LILDKHGQKMSKSKGNVVWAKDLFEKYGADPVRLYILSKAAPWEDLSFDPDEVR 649


>gi|58040207|ref|YP_192171.1| cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|61216109|sp|Q5FQ31|SYC_GLUOX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58002621|gb|AAW61515.1| Cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 452

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
               +          L  +G   KMSK  G+F T+R V+D   ++ +R + L       L
Sbjct: 252 YPHGKFATHWVHNGMLLSNGE--KMSKSLGNFFTIREVLDRSPAEPLRLLYLGAHYRSTL 309

Query: 436 DFDFCKVKEQSK 447
           DF + K++E  +
Sbjct: 310 DFSWEKLEEARR 321


>gi|109898216|ref|YP_661471.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064668|sp|Q15UM1|SYM_PSEA6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109700497|gb|ABG40417.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 675

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 89/307 (28%), Gaps = 58/307 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL   +     ++  D       + + +  +   +Q  +     Y G   P         
Sbjct: 194 DLPQFSDMLQNWLKSDALQSEISNKLEEWFEKGLQQWDISRDAPYFGFEIPGAPNKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPL-LKSDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G + D      SD   Y +   D+ YF C +          
Sbjct: 254 WVDAPVGYMASFKNLCDRSGINFDEYWGADSDAELYHFIGKDITYFHCLF---------- 303

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                        A+      +K   +NV     V         KMSK  G FI  R  +
Sbjct: 304 -----------WPAMLEGAGFRKPTGVNVHGFVTVN------GAKMSKSKGTFIKGRTYL 346

Query: 415 DEVGSDSVRFMMLWR--KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           + +  + +R+    +   N   +D +F    ++   + V  V    +RC S   +  D  
Sbjct: 347 EHLNPEYLRYYFASKLGANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFD-- 404

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
             L  ++    ++ +      S              I  A   ++ +K    +  LA   
Sbjct: 405 GKLSDNVLEPALVAEFQHAQAS--------------IAQAFEERQYHKAIREIMALADKA 450

Query: 533 HGHWSHG 539
           +      
Sbjct: 451 NQFIDAN 457


>gi|23016029|ref|ZP_00055790.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 866

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                 +      +   +     K  +  +   P+G +H+GH R   +GD +A      G
Sbjct: 22  EARWQQVWEEKRCFEAEIAPGKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKG 81

Query: 159 YEV 161
           + V
Sbjct: 82  FNV 84


>gi|307266362|ref|ZP_07547900.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918598|gb|EFN48834.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 466

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 126/391 (32%), Gaps = 68/391 (17%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
                  VN+          +H+G+ R  +V DT+   + + GY+V    Y+ +      
Sbjct: 15  EPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYKV---NYVQN----FT 67

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
            +   +  R Q+                V  K V ++  D+Y  +  N   +     V  
Sbjct: 68  DIDDKIIKRAQEE--------------NVTTKEVAEKYIDEYFKDADNLGIK--RATVHP 111

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
            + + +  II         +    + +  +       +          G +    +   +
Sbjct: 112 KATEHIEDII---------EFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQ 162

Query: 296 SKTTQKCDMDRKQ----LLFRSTMVGDDV-DRPLLKSDGSYTYFAADLAY-FKCKYERGF 349
           +    + + ++K     +L+++   G+   D P  K    +    + ++  +  K     
Sbjct: 163 AGARIEINEEKKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIH 222

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAA-VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
                ++   H   + + EA      S+    I  L         +    KMSK  G+F 
Sbjct: 223 AGGPDLVFPHHENEIAQSEAAYEQPFSKYWMHIGYL---------NINNEKMSKSKGNFF 273

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468
           T+R + ++   + +R  ML       ++F    +++ +                     A
Sbjct: 274 TVREITEKYNPEVLRLFMLMAHYRSPINFSLDLMEQANS--------------------A 313

Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499
            +   +   +L     + ++   +  E +L+
Sbjct: 314 YERLLNAVANLKHLANVCKDGGLNEEEKKLM 344


>gi|238619860|ref|YP_002914686.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238380930|gb|ACR42018.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323477475|gb|ADX82713.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 980

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L      + +K   ++VL+        D    +M K  G+++    V+ 
Sbjct: 488 GHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGF---MLDEQGREMHKSLGNYVEPSVVIQ 544

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D +R  +L     E   F +  ++   ++  + +  Y +A         + +   L
Sbjct: 545 RYGRDILRLWLLRNTTWEDARFSWRALELTKRDLQIIWNTYVFASMYMNLDNFEPVKYTL 604

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYD-LASV 531
           D  +    +                 L+ +  +++         + +++A YL + L   
Sbjct: 605 DDVIKYAKIEDLWI------------LSRFNSMLKKVNESMKNYKVHEMANYLINFLVED 652

Query: 532 FHGHW 536
               +
Sbjct: 653 VSRFY 657


>gi|145636862|ref|ZP_01792527.1| putative ATPase [Haemophilus influenzae PittHH]
 gi|145269943|gb|EDK09881.1| putative ATPase [Haemophilus influenzae PittHH]
          Length = 682

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|93005396|ref|YP_579833.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92393074|gb|ABE74349.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 934

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 22/64 (34%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  +           N         +  +   P+G +H+GH R   + D L+      G
Sbjct: 67  AQQQAKWATDKRFEVSNEPSDKPSRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKG 126

Query: 159 YEVT 162
           YEV 
Sbjct: 127 YEVM 130


>gi|325957912|ref|YP_004289378.1| isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329344|gb|ADZ08406.1| Isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 1060

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDFCKV 442
           +L     L  +G   KMSK  G+ +    V++  G+D +RF +LW  K  E L F + ++
Sbjct: 596 VLMHGFTLDEEGK--KMSKSLGNVVEPEEVIELYGADVLRFYLLWGNKPWEDLKFVWDEL 653

Query: 443 KEQSK 447
           K  +K
Sbjct: 654 KNVNK 658


>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 91/265 (34%), Gaps = 28/265 (10%)

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I ++   +E+ FH+     I D++       +V +        +   K ++   +L   +
Sbjct: 474 IFYNDETNEEIFHKEILDRICDLVRENGSNIWVEKSPEELIGEELLVKYNLKDLKLRKET 533

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAA 372
            ++    D       GS       +        R  D  +Y+ GSD   G+       + 
Sbjct: 534 NIMDVWFD------SGSSH---RGVLEVWKGLRRPAD--LYLEGSDQHRGWFHTSLLTSV 582

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A +      +VL    V    DG   KMSK  G+ ++   V+   G+D +R         
Sbjct: 583 ASTGDSPYKSVLTHGFVN---DGEGRKMSKSLGNTVSPADVIKVYGADILRLWCGSVDYR 639

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + +      VK+ S+         AY R R+  R    +    DF+     V  ++   +
Sbjct: 640 DDVRISDNIVKQMSE---------AYRRIRNTAR--YILGNSYDFNPKTDKVAYKDM-LE 687

Query: 493 TSELQLIVHLAEYPRVIENATIAQE 517
             +  L   L    R +  +    E
Sbjct: 688 IDKWAL-NKLEVLKRSVTESYDKYE 711


>gi|255656594|ref|ZP_05402003.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449952|ref|ZP_06891716.1| isoleucine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878334|ref|ZP_06902342.1| isoleucine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261222|gb|EFH08053.1| isoleucine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430632|gb|EFH16471.1| isoleucine--tRNA ligase [Clostridium difficile NAP07]
          Length = 1035

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 346 ERGFDNMI---YVM-GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           +  FD +    Y+  G D   G+   L AV+  V  K    +VL+ +LV L +DG   KM
Sbjct: 537 KENFDQLFPADYISEGIDQTRGWFYSLLAVSTFVLGKAPYKSVLVPDLV-LDKDGK--KM 593

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+ +    + D+ G+D++R+ +L+         FD   +KE
Sbjct: 594 SKSRGNTVNPMELFDQYGADALRWYLLYVSPPWTPTKFDMDGLKE 638


>gi|254524891|ref|ZP_05136946.1| leucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722482|gb|EED41007.1| leucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 880

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +         +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 10  DPQQVESAAQQYWDATRAFEVDETSDKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRY 69

Query: 154 MAFSGYEV 161
              +G+ V
Sbjct: 70  KRMTGHNV 77


>gi|209964298|ref|YP_002297213.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
 gi|226710848|sp|B6ISG4|SYC_RHOCS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209957764|gb|ACI98400.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
          Length = 456

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 39/137 (28%)

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458
           KMSK  G+F T+R ++DE   +++R  +L     + LDF   K+ +          + A 
Sbjct: 267 KMSKSLGNFYTVRELLDEFPGEAIRLALLSAHYRQPLDFTKEKIAQA---------KQAL 317

Query: 459 ARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
            R   + R  +++   ++ FD+        E + +T            P  I        
Sbjct: 318 DRWYGVLRGLEEVRAAEVPFDVLAA----LEDDLNT------------PLAI-------- 353

Query: 518 PYKLAFYLYDLASVFHG 534
                 +L++LA+ FH 
Sbjct: 354 -----SHLHELATAFHK 365


>gi|189083225|sp|Q1QDA4|SYL_PSYCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 919

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 22/64 (34%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +  +           N         +  +   P+G +H+GH R   + D L+      G
Sbjct: 52  AQQQAKWATDKRFEVSNEPSDKPSRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKG 111

Query: 159 YEVT 162
           YEV 
Sbjct: 112 YEVM 115


>gi|146328949|ref|YP_001209169.1| leucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166231604|sp|A5EWD6|SYL_DICNV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146232419|gb|ABQ13397.1| leucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 867

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +   +     +   +   +  +  K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PAQIEAAIQQQWANEERFKAVVNPQKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|126700232|ref|YP_001089129.1| isoleucyl-tRNA synthetase [Clostridium difficile 630]
 gi|254976207|ref|ZP_05272679.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093594|ref|ZP_05323072.1| isoleucyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255101782|ref|ZP_05330759.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307650|ref|ZP_05351821.1| isoleucyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255315342|ref|ZP_05356925.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518007|ref|ZP_05385683.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651123|ref|ZP_05398025.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684189|ref|YP_003215474.1| isoleucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687848|ref|YP_003218982.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520975|ref|ZP_07407322.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115251669|emb|CAJ69504.1| Isoleucyl-tRNA synthetase [Clostridium difficile]
 gi|260210352|emb|CBA64706.1| isoleucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213865|emb|CBE05876.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 1035

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 346 ERGFDNMI---YVM-GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           +  FD +    Y+  G D   G+   L AV+  V  K    +VL+ +LV L +DG   KM
Sbjct: 537 KENFDQLFPADYISEGIDQTRGWFYSLLAVSTFVLGKAPYKSVLVPDLV-LDKDGK--KM 593

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKE 444
           SK  G+ +    + D+ G+D++R+ +L+         FD   +KE
Sbjct: 594 SKSRGNTVNPMELFDQYGADALRWYLLYVSPPWTPTKFDMDGLKE 638


>gi|282889878|ref|ZP_06298416.1| hypothetical protein pah_c005o006 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500201|gb|EFB42482.1| hypothetical protein pah_c005o006 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 483

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 71/222 (31%), Gaps = 27/222 (12%)

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            ++ Q  ++   D+   Y  G Y +     +  +    LL           K +     +
Sbjct: 40  LKWSQIEWDEGPDIGGNY--GPYRQSERLPMYKEECEHLL-----ARDGAYKCFCTAEEL 92

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +R+ L               + R   +   + I      G  Y   L  P        
Sbjct: 93  SEMRELLAKSG-------GRQGYDRRCRNLSSEEITEKEAAGLPYVVRLKVPLKGECVYE 145

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  + +++F      D  D+ L+KSDG  TY    LA     +     ++I   G +   
Sbjct: 146 DAIKGRVVFP---WADVDDQVLMKSDGFPTYH---LANVVDDHLMEITHVIR--GDEWMS 197

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
              +   +      K     V +   + L RDG   K+SKR 
Sbjct: 198 STPKHVLLYELFGWKAP---VFMHMPLLLGRDGK--KLSKRK 234


>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 17/166 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A +      +VL    V    DG   KMSK  G+ ++  
Sbjct: 562 LYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVN---DGEGRKMSKSLGNTVSPA 618

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+   G+D +R         + +      +K+ S+         AY R R+  R    +
Sbjct: 619 DVIKVYGADILRLWCGSVDYRDDVRISDNILKQMSE---------AYRRIRNTAR--YIL 667

Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
               DF+    + +P +   +  +  L   L    R +  +    E
Sbjct: 668 GNSYDFN-PKTDKVPYKDMLEIDKWAL-NKLEVLKRSVTESYDKYE 711


>gi|317047302|ref|YP_004114950.1| leucyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948919|gb|ADU68394.1| leucyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 860

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESRVQQHWDENETFKVTEQEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|241767285|ref|ZP_04765017.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241362031|gb|EER58179.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 897

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  + +       +   Y         K     +   P+G +H+GH R   + D L   
Sbjct: 6   SPQEVERAAHDHWTARDAYRVTEDTNKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRY 65

Query: 154 MAFSGYEV 161
           +  +G+ V
Sbjct: 66  LRMNGHNV 73


>gi|254464521|ref|ZP_05077932.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685429|gb|EDZ45911.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 1000

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 57/202 (28%), Gaps = 33/202 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
             +    +   +       +    +     +        G +H+GH     + D +    
Sbjct: 37  DRWAEIGVYEKLREKAAAAKGTDAERKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSH 96

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G++     Y+         +   +  +Y++   N D+                    
Sbjct: 97  QMMGFDAR---YVPGWDCHGLPIEWKIEEQYRKKGKNKDA-------------------- 133

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
                     P  ++    + ++  + ++I R++ K L I  +        +    + I 
Sbjct: 134 ---------VPVVEFRQECRAFA-DSWVEIQREEFKRLGITGNWDDPYLTMNYHAEAVIA 183

Query: 275 DIIDNLARQGYVYEGILPPPKS 296
           D        G +Y+G  P   S
Sbjct: 184 DEFMKFLMNGTLYQGSKPVMWS 205


>gi|188994407|ref|YP_001928659.1| glutamyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691464|sp|B2RI67|SYE_PORG3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|188594087|dbj|BAG33062.1| glutamyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 507

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 25/280 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G ++       D+   +      +    +  
Sbjct: 13  APSPTGPLHIGGVRTALYNYLFARQH---GGDMILRIEDTDSNRFVPGAEAYIIEALEWL 69

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +++   Y  +LL+            +     ++  R +
Sbjct: 70  GIKFDEGVGYGGRFGPYRQSERRDIYRTYVRQLLDSG-----RAYIAFDTPEELEARRAE 124

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +     Q+D         R   +   + ++ L  +G  Y        +   +  D+ R +
Sbjct: 125 VPNF--QYDATTRGQ--MRNSLTLPAEEVERLVAEGTQYVVRFLVEPNVDVEVNDLIRGR 180

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 181 VVIDSSILD---DKVLYKSADDLPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 232

Query: 368 EAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +        L  L++   +G   K+SKR GD
Sbjct: 233 VLLYRAFGWEDTMPRFAHLALLLKPEGNG---KLSKRDGD 269


>gi|160872646|ref|ZP_02062778.1| leucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121445|gb|EDP46783.1| leucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 834

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 22/64 (34%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   +         +         K     +   P+G +HVGH R  V+GD +A      
Sbjct: 10  LEADIQKFWEEHQCFKVTEDLNKEKFYCLSMFPYPSGHLHVGHVRNYVLGDVIARYQRML 69

Query: 158 GYEV 161
           G  V
Sbjct: 70  GKNV 73


>gi|146304446|ref|YP_001191762.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145702696|gb|ABP95838.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 808

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           + P + +  L+      I        K     I+      +G +H+GH     + D +A 
Sbjct: 23  IEPKWQKLWLTQEYWEKIFKFDENSEKP-VFFIDTPPPFTSGELHMGHAYWVTIADAMAR 81

Query: 153 LMAFSGYEV 161
                GY V
Sbjct: 82  FKKLQGYNV 90



 Score = 37.6 bits (86), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440
              ++     L  DG   +MSK  G+ ++    +DE G+D++R  +L     +   F + 
Sbjct: 528 FKRVIVHGQVLGPDGT--RMSKSKGNNVSPMDRIDEFGADAIRMTLLDASIGDDFPFKWD 585

Query: 441 KV 442
            V
Sbjct: 586 TV 587


>gi|16127979|ref|NP_422543.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236801|ref|YP_002519238.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|32171583|sp|Q9A217|SYL_CAUCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782490|sp|B8GW27|SYL_CAUCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13425523|gb|AAK25711.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965974|gb|ACL97330.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 861

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 25/62 (40%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   + +     +     K  +  +   P+G +H+GH R   +GD +A      G+
Sbjct: 12  KWREAWAKADVFKTGEINDGRPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGF 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|322436941|ref|YP_004219153.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164668|gb|ADW70373.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 960

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 22/123 (17%)

Query: 330 SYTYFAADLA--YFKCKYERGFD-------NMIYVMGSDHSGYVKRL----EAVAAAVSE 376
                + DLA  Y       GFD        MI ++G+    +  +     +     +++
Sbjct: 503 GPLSLSPDLASFYPTDLLVTGFDILFFWVARMI-MLGT----HFMQEVPNADGTPRTLAD 557

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELL 435
                 V +  LV   RD    KMSK  G+ I    ++ + G+D+VRF +  +      +
Sbjct: 558 SVPFREVYIHALV---RDADRQKMSKTKGNVIDPIEIITKYGTDAVRFTLASQASPGTDI 614

Query: 436 DFD 438
            F+
Sbjct: 615 AFN 617


>gi|295691571|ref|YP_003595264.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295433474|gb|ADG12646.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 861

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 25/62 (40%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +   + +     +     K  +  +   P+G +H+GH R   +GD +A      G+
Sbjct: 12  KWREAWAKADVFKTGEINDGRPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGF 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|237755560|ref|ZP_04584178.1| glutamyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692293|gb|EEP61283.1| glutamyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 478

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 104/311 (33%), Gaps = 52/311 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR---EYYINDAGAQINTLAL 179
           + +PTG +H+G+ R A+     +       ++     ++ R   EY           L  
Sbjct: 7   APSPTGYLHLGNARTALFNYLFSRHENATFILRIEDTDLERSKKEY--------EEMLME 58

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            + W   +     D   P     G+Y +    E+  KY  +LL   +  +    ++   Q
Sbjct: 59  DLKWMGIEWDEGPDVGGP----HGLYRQSERLEIYVKYVDKLLKSGDAYYCYCTEEELEQ 114

Query: 240 AMMKIIRDD--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
              K I +    +      ++   E  F+ G              +G +   +      K
Sbjct: 115 EREKAIAEGRPYRYSGKCRNLTPEERAFYEG--------------KG-IKPVVRFKVPDK 159

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
           T    D+ R  +   +   GD     +++ DG   Y    +         G  ++I   G
Sbjct: 160 TVVFEDIIRGHVEIDTKEFGDF---VIVRQDGMPVYNFVVV---IDDALMGITHVIR--G 211

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            DH     +   +  A+     Q   L    + L  D    K+SKR G  +++R + D+ 
Sbjct: 212 EDHLSNTPKQIVIYEALGFAIPQFAHL---PIILGEDRT--KLSKRHG-AVSVRALKDDG 265

Query: 418 GSDSVRFMMLW 428
                 F  L 
Sbjct: 266 FISEAVFNYLS 276


>gi|119964190|ref|YP_947987.1| leucyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119951049|gb|ABM09960.1| leucyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 865

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 96  SYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           + +      +     +    +   +  +  ++     P+G +H+GH     +GD +A  +
Sbjct: 51  AAMEAKWPQVWEDLKVFTPADDGSRERRYVLDMF-PYPSGDLHMGHAEAFAMGDVVARYL 109

Query: 155 AFSGYEV 161
              G++V
Sbjct: 110 RQKGFDV 116


>gi|119476779|ref|ZP_01617089.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450035|gb|EAW31271.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 455

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 96/337 (28%), Gaps = 41/337 (12%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              K   V +          +H+G+ R  VV DTL  ++                     
Sbjct: 17  EPIKPDTVTMYVCGPTVYNRVHIGNARPVVVFDTLYRVLK-------------------- 56

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF----PEEKWLP 231
           TL  SV +  +     +D  +      G  +  +    A  Y  ++       P+     
Sbjct: 57  TLYSSVIY-ARNITDIDDKIMAAAKAGGETIAAISSRYATAYFDDMAELNNLPPDIIPYA 115

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
                 + AM++ + D   A   +  I               R + D LA       G  
Sbjct: 116 TDHVGEMVAMIQTLIDKGHAYEAESHILFDVKSMSGYGKLAKRSLEDMLA-------GAR 168

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
                      D     L   ST      D P  +    +    + +       E+   N
Sbjct: 169 VDVADYKKYAGDF---VLWKPSTDEEPGWDSPWGRGRPGWHLECSAM------IEKHLGN 219

Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            I + G          E   A  +        +   +   Y +    KMSK  G+F  ++
Sbjct: 220 TIDIHGGGIDLQFPHHENELAQSTCAHDGEPFVRYWMHNAYINIDGEKMSKSLGNFRMVK 279

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            ++D    + +RF +L       L+F    +    K 
Sbjct: 280 DLLDHYPGEVLRFSILSAHYRSELNFSADALDSAQKT 316


>gi|115524756|ref|YP_781667.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518703|gb|ABJ06687.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 965

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +     +      V +  LV   RD    KMSK  G+
Sbjct: 543 TGFD-IIFFW-------VARMMMMGLHFMKDVPFPTVYIHALV---RDEKGAKMSKSKGN 591

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I   H++D+ G+D++RF +
Sbjct: 592 VIDPLHLIDDYGADALRFTL 611


>gi|126178353|ref|YP_001046318.1| isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166229750|sp|A3CSI6|SYI_METMJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125861147|gb|ABN56336.1| Isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 1059

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 344 KYERGFDNMI---YVM-GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           +    FD +    ++  G D   G+   +L A   A    +A    +L     L  DG  
Sbjct: 534 REREAFDRLWPADFITEGQDQTRGWFYSQLGASTVAFG--RAPYKSVLMHGFALDADGR- 590

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVK 443
            KMSK  G+ +T   V+++ G D +RF +LW     + L F++  VK
Sbjct: 591 -KMSKSFGNVVTPEEVMNQFGVDVLRFYVLWANAPWDDLKFNWDSVK 636


>gi|46196634|gb|AAS81050.1| isoleucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 1067

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 33/219 (15%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +   +    A  NV+   L+    D    KMSK  G+ +    ++ 
Sbjct: 575 GIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLI---LDEKGQKMSKSKGNVVDPWDIIR 631

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D++R ++ +         F    V+E  ++          F+V YA          
Sbjct: 632 EFGADALRWYIYVSAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYA---------- 681

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                   + D       P   +    +  L+  + +  + +  A  A +P   A  L D
Sbjct: 682 --------NLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEALEAYDPTTSARALRD 733

Query: 528 -LASVFHGHWSHGRENPRLRFVQANNRKLTMMRL--QLV 563
            +       +         +   A +R+     L   LV
Sbjct: 734 FVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALV 772


>gi|323474747|gb|ADX85353.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 980

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L      + +K   ++VL+        D    +M K  G+++    V+ 
Sbjct: 488 GHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGF---MLDEQGREMHKSLGNYVEPSVVIQ 544

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
             G D +R  +L     E   F +  ++   ++  + +  Y +A         + +   L
Sbjct: 545 RYGRDILRLWLLRNTTWEDARFSWRALELTKRDLQIIWNTYVFASMYMNLDNFEPVKYTL 604

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA---TIAQEPYKLAFYLYD-LASV 531
           D  +    +                 L+ +  +++         + +++A YL + L   
Sbjct: 605 DDVIKYAKIEDLWI------------LSRFNSMLKKVNESMKNYKVHEMANYLINFLVED 652

Query: 532 FHGHW 536
               +
Sbjct: 653 VSRFY 657


>gi|313888600|ref|ZP_07822265.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845329|gb|EFR32725.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 651

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 94/329 (28%), Gaps = 44/329 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVT----REYY---INDAGAQINTLALSVFWR 184
           P+  +H+GH  C V  D +       GY+V      + +   I D   +      +    
Sbjct: 15  PSDNLHIGHTYCTVAVDCVKRFKTMQGYDVFFTTGTDEHGQKIEDKAKEFGMEPKAYVDG 74

Query: 185 YQQALYNNDSDLPEGYY---------PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             + +      +   Y              ++ + ++L DK         +  +    + 
Sbjct: 75  IVKNIKKLWEIMDIDYDYFVRSTDEDHEKDVQEIFQKLYDK-GDIYKGEYKGYYCKPCES 133

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +  +A +              ++   E  F R          D L +    +   + P  
Sbjct: 134 FWTEAQLGEGH-TCPDCGRSTELTNEESYFFRLSKYK-----DRLLKYYEDHPEFIEPAF 187

Query: 296 SKTTQKCDMDRKQLLFRSTMVG------------DDVDRPLLKSDGSYTYFAADLAYFKC 343
            K     +    +       V             D      +  D    Y  A + Y   
Sbjct: 188 RKNEMVKNFFEGESGLEDLSVSRSTFDWGVKVPFDPKHVVYVWIDALTCYLTA-IGYGTD 246

Query: 344 KYERGFDNMIYV--MGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K +        V  +G +    +V    A+  A+        V     +    D    KM
Sbjct: 247 KEKFNDYWPADVHFVGKEIIRFHVIIWPAILMALDLPLPD-KVFGHGWILFDND----KM 301

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           SK  G+ I    ++   G D++++ +L  
Sbjct: 302 SKSKGNVIYPEPIIKLYGVDALKYFLLRE 330


>gi|227488539|ref|ZP_03918855.1| isoleucyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543143|ref|ZP_03973192.1| isoleucyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091433|gb|EEI26745.1| isoleucyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181131|gb|EEI62103.1| isoleucyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 1057

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+   L  +A A+ ++ A   V+   +V L  DG  +KMSK  G++  ++ V D  GSD
Sbjct: 597 RGWFYTLHVLATALFDRPAYKRVVAHGIV-LGNDG--LKMSKSKGNYPNVKEVFDRDGSD 653

Query: 421 SVRFMMLW 428
           ++R+ ++ 
Sbjct: 654 AMRWFLMS 661


>gi|225619615|ref|YP_002720872.1| glutamyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214434|gb|ACN83168.1| glutamyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 481

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 108/350 (30%), Gaps = 74/350 (21%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G+ R A+     A       ++     +  R          ++    S+ 
Sbjct: 9   APSPTGFLHIGNARTALFNWLYAKAIKGKLILRIEDTDQERS-----TKEAVDMAIKSLK 63

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W         +     G   G Y +    ++  KY+ +L+   +  +        ++   
Sbjct: 64  WLGIDWDEGPEV----GGDYGPYFQSERLDIYKKYTEKLMEEGK-AYYCFCTSEELEKKS 118

Query: 243 KIIRDDLKAL---NIQHDIFISE--DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            + R   + +       DI + E       G+P+ IR                   PK++
Sbjct: 119 NMQRTLNQPIIYDGKCKDIPLEEARRRVANGEPAKIR----------------FRVPKNQ 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D  R  +   S  +G   D  +++ +G  TY   + A           ++I   G
Sbjct: 163 IVTFDDFVRGIVKTNSDEIG---DIIIVRENGFPTY---NYAVVIDDMLMKITHVIR--G 214

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG------------ 405
            DH     +   +  A+  +  +       L    +     K+SKR G            
Sbjct: 215 EDHISNTPKQILIYQALGAEVPRFAHTSSILGNDRK-----KLSKRHGAATLMEYKDEGF 269

Query: 406 ------------DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
                        +     +   V  D ++   L R +     FD  K++
Sbjct: 270 LPQAMRNFLALLGWTHPEAMETMVDDDMIKAFKLDRFSKSPAIFDTAKLR 319


>gi|157146740|ref|YP_001454059.1| leucyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083945|gb|ABV13623.1| hypothetical protein CKO_02514 [Citrobacter koseri ATCC BAA-895]
          Length = 868

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 15  PEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 74

Query: 155 AFSGYEV 161
              G  V
Sbjct: 75  RMLGKNV 81


>gi|149915811|ref|ZP_01904336.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810393|gb|EDM70238.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 975

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +K   +V +  LV   RD    KMSK  G+
Sbjct: 580 TGFD-IIFFW-------VARMMMMQYAVVGQKPFSHVYVHALV---RDEKGKKMSKSLGN 628

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            +    ++D+ G+D+VRF +
Sbjct: 629 VLDPLDLIDDYGADAVRFTL 648


>gi|121596702|ref|YP_990025.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|121224500|gb|ABM48031.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
          Length = 989

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 73/242 (30%), Gaps = 36/242 (14%)

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK---SKTTQKCDMDRKQLLFRSTMVGDD 319
              H      +  +   + R G      L P +    +   +   D   + F S  +   
Sbjct: 548 RSLHPRSARLVEAVAARVERDGIAAWSRLRPAELGVDENAYEKLSDTLDVWFDSGSIHAT 607

Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKK 378
           V R   ++D                   G+   +Y+ G+D   G+         A   + 
Sbjct: 608 VYRDAARADTG-----------------GYPADLYLEGADQHRGWFGASLMTGCAADGRA 650

Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
               +L    V    DG   KMSK  G+ ++ + + D   +D +R  +     +  +   
Sbjct: 651 PFRAILTHGFVV---DGAGRKMSKSLGNTVSPQRIADTRDADILRLWIASTDYAAEMSIS 707

Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
             ++ E+  E         Y R R+  R       D D      + +P     D     L
Sbjct: 708 -DEILERVVE--------TYRRMRNTLRFLLQNVADFD---PRDDAVPAGQLLDVDRYAL 755

Query: 499 IV 500
             
Sbjct: 756 AR 757


>gi|114327800|ref|YP_744957.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327235|sp|Q0BT18|SYC_GRABC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114315974|gb|ABI62034.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 470

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
                      L  DG   KMSK  G+ +T+R ++ +   +++R + L      +LDF +
Sbjct: 271 HFAHYWMHSAMLLLDGE--KMSKSLGNVLTVRDLLGQADGEAIRLLFLKTHYRGVLDFRY 328

Query: 440 CKVKEQSKENPVFY 453
             +KE  KE   FY
Sbjct: 329 EALKEAGKELDRFY 342


>gi|313906069|ref|ZP_07839421.1| glutamyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469114|gb|EFR64464.1| glutamyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 485

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 100/290 (34%), Gaps = 32/290 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG MHVG+ R A+    +A      G +        D    +      ++   +  
Sbjct: 9   APSPTGRMHVGNLRTALYSYLIA---KHEGGKFMLRIEDTDQERFVPEALDIIYQTMKDT 65

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKE--LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
              +D    +    G Y++    +  L  KY+ +L+   +  +      +  +  ++ ++
Sbjct: 66  GLVHDEGPDKDGGVGPYVQSERCQSGLYLKYAKQLVEQGDAYYC-----FCTKERLEGLK 120

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             +    I          + +      ++ +      G  Y      P   TT   D   
Sbjct: 121 RTVAGKEI--------SAYDKHCLHLSKEEVQAKLDAGEPYVIRFNMPLEGTTTFHDEIY 172

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
             +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++     +
Sbjct: 173 GDITVNNEELD---DLILIKSDGYPTY---NFANVIDDHLMGITHV--VRGNEYLSSTPK 224

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              +  A         + +     L  +    K+SKR+G   +   ++D+
Sbjct: 225 YNRIYEAFGWD-----IPVYIHCPLITNEEGQKLSKRSGHS-SFEDLLDQ 268


>gi|304383721|ref|ZP_07366180.1| glutamate--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335245|gb|EFM01516.1| glutamate--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 505

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 99/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
            +  +V + F + +PTG +H+G  R A+     A      G  V R     D+   +   
Sbjct: 1   MEERRVRVRF-APSPTGALHIGGVRTALYNYLFARQHK--GDFVFRIE-DTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++      D  +  G   G Y +   +E+  KY   LL             + 
Sbjct: 57  EEYIIESFRWLGLQFDEGVSFGGDKGPYRQSERREIYKKYVDRLLEDG-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               ++  R++++    Q+D         R   +  ++ ++ L   G  Y          
Sbjct: 112 TPEELESKRNEIQNF--QYDARTRMQ--MRNSLTLTKEEMEALIADGTQYVVRFRVEPGI 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R  +   S +V    D+ L K SD   TY    LA     +     ++I   
Sbjct: 168 EVHIDDLIRGDVRIMSDIVD---DKVLYKSSDELPTYH---LANIVDDHLMEITHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   ++         L+ L  +G   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYKAFGWEETMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|222085774|ref|YP_002544304.1| valyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|221723222|gb|ACM26378.1| valyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 947

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 43/255 (16%)

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     P++  +++L        G +                 L   ST+   D    L 
Sbjct: 479 YLSHEGPMKAYVEDLLEN--FKPGEILTRDEDVLDTWFSS--ALWPFSTLGWPDETPELA 534

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +      Y+  ++         GFD +I+         V R+  +     + K    V  
Sbjct: 535 R------YYPTNV------LVTGFD-IIFFW-------VARMMMMGLHFMKDKNGDPVEP 574

Query: 386 CELVR---LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-LWRKNSELLDFDFCK 441
              V    L RD    KMSK  G+ I    ++D+ G+DS+RF + +       +  D  +
Sbjct: 575 FNTVYVHALVRDKNGQKMSKSKGNVIDPLELIDQYGADSLRFTLAIMAAQGRDVKLDPSR 634

Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501
           +                             F +++      + +P+ +E   +   ++  
Sbjct: 635 IAGYRNFGTKL--------------WNATRFAEMNGAKSDPHFVPEAAELTINRW-ILTE 679

Query: 502 LAEYPRVIENATIAQ 516
           LA   R +  A  A 
Sbjct: 680 LARTERDVTEAIEAY 694


>gi|145642100|ref|ZP_01797670.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
 gi|145273179|gb|EDK13055.1| tellurite resistance protein TehB [Haemophilus influenzae 22.4-21]
          Length = 548

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 60  DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 119

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 120 WLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 165

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 166 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 213

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 214 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 248


>gi|119357784|ref|YP_912428.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355133|gb|ABL66004.1| Isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 1086

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AVA  + +  A  N+++   +    D    KMSK  G+ +     + 
Sbjct: 585 GVDQTRGWFYTLHAVATLLFDCPAYKNLIVNGHI---LDKNGHKMSKSKGNVVDPFETMQ 641

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             G+D++R+ ++          F+  +++E+ ++       +  F+V YA
Sbjct: 642 RYGADALRWYLIATSPPWRPKSFNTDEIEEEQRKFFRAYINSYNFFVLYA 691


>gi|327439174|dbj|BAK15539.1| leucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 804

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     +     L  + + L       KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDLGLVHTKEPFQKLFNQGMILGEG--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    ++   G+D++R
Sbjct: 584 VVNPDDIIVSHGADTLR 600


>gi|325567617|ref|ZP_08144284.1| glutamate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325159050|gb|EGC71196.1| glutamate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 485

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 92/294 (31%), Gaps = 32/294 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ R A+     A            E+ I           +    + +  
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR-------HNDGEFII----------RIEDTDQKRNI 51

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIR 246
                S L    + G+       E   +Y     +   + + P++     S +A      
Sbjct: 52  EDGEKSQLENLQWLGMD-WDESPENPGEYGPYRQSERGDIYQPLIDQLLASNRAYKCYCT 110

Query: 247 DDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           ++      +      E   + G   +   +       QG          ++   +  DM 
Sbjct: 111 EEELEAEREGQRTRGEMPHYAGKCANLTPEEQAEKEAQGLKPVIRFRVSRNTEYKFHDMV 170

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
           + +++F S  VG D    + K DG  TY   + A     +     +++   G DH     
Sbjct: 171 KGEIVFESDNVGGDF--VIQKRDGMPTY---NFAVAVDDHHMKITHVLR--GDDHIANTP 223

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           +   +  A   +  +       +  +       K+SKR    +       E+G 
Sbjct: 224 KQLMIYEAFGWQAPEFGH----MTLIINSETGKKLSKRDESILQFIEQYRELGY 273


>gi|323144575|ref|ZP_08079164.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415651|gb|EFY06396.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 939

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 27/162 (16%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+      ++ A+ +K     VL         DG   KMSK  G+ I  + 
Sbjct: 562 YLEGSDQHRGWFMSSLMLSVAMKDKAPYRQVLTHGF---TVDGNGRKMSKSLGNVIAPQS 618

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V+D++G+D +R  +     +  +     ++ ++S +        +Y R R+  R      
Sbjct: 619 VMDKLGADVLRLWVASTDYTGEIAVS-DEIFKRSSD--------SYRRVRNTIR------ 663

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
                     N+   + + D  E   ++ L ++   +  A  
Sbjct: 664 ------FLLANLSGFDPQKDLVEFDKMIELDKW--AVSQAAK 697


>gi|268590249|ref|ZP_06124470.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314533|gb|EFE54986.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 675

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 77/253 (30%), Gaps = 43/253 (16%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A +     +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFSDMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRDAPYFGFEIPDAPGKYFYV 253

Query: 303 DMDRKQLLFRS-----TMVGD-DVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S        GD D D    K+  +  Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNLCDKRGDLDFDEFWNKNSKTDLYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K     +      +  +G   KMSK  G FIT R  +
Sbjct: 301 -----HSLF---WPAMLEGSQYRKPTNLFVHGY---VTVNGA--KMSKSRGTFITARSYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
           D + +D +R+    + +S + D DF       + N                R A  I   
Sbjct: 348 DHLDADCLRYYYAAKLSSRIDDIDFNLEDFVQRVNS----DIVNKVVNLASRNAGFIAKR 403

Query: 475 LDFDLFPRNVIPQ 487
            D  L      P+
Sbjct: 404 FDGKLSANLAEPE 416


>gi|194865748|ref|XP_001971584.1| GG15050 [Drosophila erecta]
 gi|190653367|gb|EDV50610.1| GG15050 [Drosophila erecta]
          Length = 994

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 11/169 (6%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    + +        +     +     N TG +H+GH   A V D +A      G
Sbjct: 51  AYWEREERQANLPKASASSCRRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQREQLG 110

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
           Y+V      + AG     +        Q                  +L  V +  A+K +
Sbjct: 111 YQVDWIPGTDHAGIATQVVVERTIAASQAKTRQELG-------RAAFLDEVWRWKAEKGA 163

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267
             + +          K    +    +      A+N+  +    E   HR
Sbjct: 164 GIVQDL----RQLGCKLNWQREYFTMDEQQAHAVNVAFERLFDEGLIHR 208


>gi|189083242|sp|A8AJG0|SYL_CITK8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|146310834|ref|YP_001175908.1| leucyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980077|sp|A4W827|SYL_ENT38 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145317710|gb|ABP59857.1| leucyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 894

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIETKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|312144034|ref|YP_003995480.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904685|gb|ADQ15126.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 831

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K LS    S ++       K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 12  EKWLSRWEKSNLDKTGTDPDKENYYVLEMF-PYPSGNLHMGHVRVYSIGDVVARYKRMEG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|270666769|ref|ZP_06222445.1| methionine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316829|gb|EFA28560.1| methionine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 148

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           Y +   D+ YF                  HS +     A+      +K   NV     V 
Sbjct: 47  YHFIGKDIVYF------------------HSLF---WPAMLEGSGYRKPT-NVFAHGYVT 84

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +  DG   KMSK  G FI     ++ +  + +R+    + N  + D DF       + N 
Sbjct: 85  V--DGA--KMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNT 140


>gi|258512336|ref|YP_003185770.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479062|gb|ACV59381.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 1046

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++ AV+ K    NVL+   V    D    KMSK  G+ I      D+ 
Sbjct: 561 DQTRGWFYSLLAISTAVTGKAPYKNVLVLGHV---LDEHGKKMSKSKGNVIDPFEAFDKH 617

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           G+D+VRF  +           + +   ++K   +  +Q  +           D F     
Sbjct: 618 GADAVRFYFVSNTQPWNSQLFYHRAVAEAKAKYIDLLQNIHQFYA--LYAGIDGFNPYQV 675

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537
           +  P    P    +      L+  L +  + ++ A    +  + A  L          + 
Sbjct: 676 EQVPVAERPLMDRW------LMARLHQTIQGVDEAYHRYDATQAARLLQAFVDELSTWY- 728

Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569
             R N    +     +      L L  A+ ++
Sbjct: 729 -VRRNRDRFWADGMEKDKVAAYLTLFEALKTV 759


>gi|218679906|ref|ZP_03527803.1| valyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 329

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 27/164 (16%)

Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325
           +     P++  +++L        G +                 L   ST+   D    L 
Sbjct: 177 YLSHEGPMKAYVEDLLEN--FKPGEILTRDEDVLDTWFSS--ALWPFSTLGWPDETPELA 232

Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385
           +      Y+  ++         GFD +I+         V R+  +     + +    V  
Sbjct: 233 R------YYPTNV------LVTGFD-IIFFW-------VARMMMMGLHFMKDEDGQPVEP 272

Query: 386 CELVR---LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
              V    L RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 273 FNTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTL 316


>gi|260828039|ref|XP_002608971.1| hypothetical protein BRAFLDRAFT_104972 [Branchiostoma floridae]
 gi|229294325|gb|EEN64981.1| hypothetical protein BRAFLDRAFT_104972 [Branchiostoma floridae]
          Length = 422

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 10/184 (5%)

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207
           + L    +  G +    Y+ ND    +  L  S+    Q+    N       ++     K
Sbjct: 24  EALYRFRSQIGIKDVTGYFWNDLEVDMGKLISSLLKLNQRKAKENSRARRIHHHLIQTEK 83

Query: 208 HVGKELADKYSS---------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258
              +E                E   + EEK   + ++ + +A  +  R  L  L    + 
Sbjct: 84  KQEREAFKNDKEILEQSVRELEQKKYEEEKRWKLERERTQRANRRAERI-LHQLVETKNK 142

Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
              E +  + D   +   +  L ++ Y  E      + ++ +     +K++ F S   G 
Sbjct: 143 LKQEREAFKHDKEVLETSVKELEQKKYEEEKRRQLDRERSRRANSKAKKKIDFTSDHAGP 202

Query: 319 DVDR 322
             D+
Sbjct: 203 SDDQ 206


>gi|201065947|gb|ACH92383.1| FI07227p [Drosophila melanogaster]
          Length = 529

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 112/332 (33%), Gaps = 65/332 (19%)

Query: 88  FIN-LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           +IN L ++P  L +       S +                  + +PTG +H+G  R A+ 
Sbjct: 16  YINMLKINPRMLMQQCLRHAHSQVRV--------------RFAPSPTGYLHLGGLRTALY 61

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----GYYP 202
               A  +   G  + R   I D       L      R  + L     ++ E    G   
Sbjct: 62  NFLYARHLG--GKFLLR---IED--TDQTRLVPGASERLVEDLLWAGIEIDEGPGFGGQL 114

Query: 203 GVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           G Y++    E+  K   ELL+       F  E+ L +++  +++      R   +  N  
Sbjct: 115 GPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLDLLRKEALRT-----RQVPRYDNKC 169

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
             +  SE              +D+L  +G     I            D+   ++     +
Sbjct: 170 RHLTTSE--------------VDSLLAKG-TPYCIRFKLTDHEEPLDDLIYGKV--HHNV 212

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375
             ++ D  ++KSD   TY  A++      +  G  +++   G +      +   +  A  
Sbjct: 213 SDNEGDPVVMKSDQFPTYHFANV---VDDHLMGITHVLR--GVEWQISTTKHLLLYKAFG 267

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  +        + L  +    K+SKR GD 
Sbjct: 268 WQPPKFGH-----LPLLVNADGTKLSKRQGDI 294


>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 921

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A++       +L    V    DG   KMSK  G+ I  +
Sbjct: 548 LYLEGSDQHRGWFNSSLITSVAINGLAPYKGLLTHGFV---LDGEGRKMSKSLGNVIIPQ 604

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D+ G+D +R  +     +  +      +K+ S+          Y + R+ FR     
Sbjct: 605 KVMDQYGADILRLWVASVDYTADVRISMDMLKQVSE---------VYRKIRNTFRFLHGN 655

Query: 472 FPDLD 476
             D D
Sbjct: 656 ITDFD 660


>gi|160900639|ref|YP_001566221.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
 gi|160366223|gb|ABX37836.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
          Length = 870

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 26/177 (14%)

Query: 207 KHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQH----DIFIS 261
                E+ DK    ++    E + +   KD + Q  +++I ++L +L  ++    +++ S
Sbjct: 406 IDSKPEVMDKLERRMIQLKIEREAMKKEKDEASQKRLQLIEEELGSLEREYADLEEVWKS 465

Query: 262 E------DDFHRGDPSPIRDIIDNLARQG------YVYEGILPPPKSKTTQKCDMDRKQL 309
           E       +  R +   IR  I+ L R+G       +  G LP  + +  +    ++ Q 
Sbjct: 466 EKASAQGSEQIRKEIDQIRIQIEELKRKGDFNKVAELQYGKLPSLEKQLNEAQANEQGQG 525

Query: 310 ------LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-VMGSD 359
                 L R+ +  +++   + ++ G     A  +   K K  R  D +   V+G D
Sbjct: 526 GAPAHRLLRTHVGAEEIAEVVSRATGIPV--AKMMQGEKDKLLRMEDRLHDRVVGQD 580


>gi|154250197|ref|YP_001411022.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769399|sp|A7HN82|SYL_FERNB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154154133|gb|ABS61365.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 819

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +      +      +         K     +   P+G +HVGH +  V+GD +A  
Sbjct: 5   KPQEIESKWQGVWSEKKVFETPQYSDKKKYYALVMFPYPSGTLHVGHVKNYVIGDIVARY 64

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 65  KRMQGYNV 72


>gi|94496308|ref|ZP_01302885.1| isoleucyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424054|gb|EAT09078.1| isoleucyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 988

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 17/173 (9%)

Query: 344 KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402
           +Y  G    +Y+ GSD   G+ +     +     +     VL         DG   KMSK
Sbjct: 626 RYGEGARADLYIEGSDQHRGWFQSSLLESCGTRGRAPYKAVLTHGF---ALDGTGKKMSK 682

Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462
             G+ +    ++ E G+D +R  +          FD  ++ ++           AY + R
Sbjct: 683 SLGNVVDPLKIMSESGADILRVWVASTDY-----FDDVRIGKEVLAGASD----AYRKLR 733

Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           + FR       D D +    +     +E    E  ++  LA     +      
Sbjct: 734 NTFRYMLGALSDYDEETEAVS----YAEMPELERYMLHRLAALDAELRAVVDK 782


>gi|16329894|ref|NP_440622.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501028|sp|P73274|SYL_SYNY3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1652380|dbj|BAA17302.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 869

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
            ++  +   +       +L          + S N    +H+GH R   + D +A L    
Sbjct: 14  WQQRWAEWGLDKTPIASDLPKFYALSMFPYPSGN----LHMGHVRNYTITDVIARLKRMQ 69

Query: 158 GYEV 161
           GY+V
Sbjct: 70  GYQV 73


>gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 481

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 104/323 (32%), Gaps = 56/323 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYE-VTREYY--IND--------AGAQINTLALSVFWRY 185
           H+GH R  VV D +   +  +GYE      Y  ++D         G   N ++      +
Sbjct: 38  HIGHARANVVFDMIYRYLRHAGYEVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAEF 97

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            + +     DLP              ++ ++  ++   +  +  +      +    +K+ 
Sbjct: 98  DRDMAALGLDLPTYQPKATEHIAEMIQVIERLVAKGFAYAADGDVY-FSVEAFDQYLKLS 156

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +L+ +     I + E   H  D       +   ++ G  Y      P  +      ++
Sbjct: 157 KRNLEEMQAGARIEVGEKKRHPMDF-----ALWKGSKPGEPYWD---SPWGQGRPGWHIE 208

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  +                    Y            +  F +        H   + 
Sbjct: 209 CSAMSMK--------------------YLGETFDIHGGGKDLVFPH--------HENEIA 240

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + EA      +  A+  +        + +    KMSK  G+F T++ V++   ++ +RF 
Sbjct: 241 QSEAAN---GKPFARYWIH-----NGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFF 292

Query: 426 MLWRKNSELLDFDFCKVKEQSKE 448
           +L       +DF    +KE +  
Sbjct: 293 LLSAHYRSPIDFSDQNLKEAAAG 315


>gi|156377136|ref|XP_001630713.1| predicted protein [Nematostella vectensis]
 gi|156217739|gb|EDO38650.1| predicted protein [Nematostella vectensis]
          Length = 1163

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSE 433
             K     L+   + L  DG   KMSKR  ++     ++++ GSD++R  ++      +E
Sbjct: 567 FDKPPFKNLIVNGLVLAADGA--KMSKRKKNYPDPMEIINKHGSDALRLYLINSPVVRAE 624

Query: 434 LLDFDFCKVKEQSKE 448
            L F    VK+  K+
Sbjct: 625 TLKFQEKGVKDVVKD 639


>gi|149202271|ref|ZP_01879244.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144369|gb|EDM32400.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 1039

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 11/82 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +  AV  +K   +V +  LV   RD    KMSK  G+
Sbjct: 645 TGFD-IIFFW-------VARMMMMQYAVVGQKPFAHVYVHALV---RDEKGKKMSKSLGN 693

Query: 407 FITLRHVVDEVGSDSVRFMMLW 428
            +    ++++ G+D+VRF +  
Sbjct: 694 VLDPLDLIEDYGTDAVRFTLTS 715


>gi|145592581|ref|YP_001156878.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189083634|sp|A4X0V0|SYV_SALTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|145301918|gb|ABP52500.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 860

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           D    KMSK  G+ +T   ++++ GSD+VR+  +  +      FD  ++K
Sbjct: 569 DPDRKKMSKSKGNTVTPMALLEKYGSDAVRYWAVSGRPGTDTAFDTGQMK 618


>gi|161611245|ref|YP_004677.2| isoleucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|84029575|sp|Q72JR6|SYI_THET2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1043

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 33/219 (15%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +   +    A  NV+   L+    D    KMSK  G+ +    ++ 
Sbjct: 551 GIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLI---LDEKGQKMSKSKGNVVDPWDIIR 607

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D++R ++ +         F    V+E  ++          F+V YA          
Sbjct: 608 EFGADALRWYIYVSAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYA---------- 657

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                   + D       P   +    +  L+  + +  + +  A  A +P   A  L D
Sbjct: 658 --------NLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEALEAYDPTTSARALRD 709

Query: 528 -LASVFHGHWSHGRENPRLRFVQANNRKLTMMRL--QLV 563
            +       +         +   A +R+     L   LV
Sbjct: 710 FVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALV 748


>gi|6323414|ref|NP_013486.1| Nam2p [Saccharomyces cerevisiae S288c]
 gi|135144|sp|P11325|SYLM_YEAST RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|4021|emb|CAA28791.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|172008|gb|AAA34805.1| leucyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|609429|gb|AAB67277.1| Nam2p: mitochondrial leucyl-tRNA synthetase [Saccharomyces
           cerevisiae]
 gi|285813787|tpg|DAA09683.1| TPA: Nam2p [Saccharomyces cerevisiae S288c]
          Length = 894

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 97  YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156
            + +        G+     L      +  +F    P+G +H+GH R  V+ D+L      
Sbjct: 25  AIGEKWKQKTTRGLPKQDTLNSGSKYILCQF--PYPSGALHIGHLRVYVISDSLNRFYKQ 82

Query: 157 SGYEVT 162
            GY V 
Sbjct: 83  KGYNVI 88


>gi|134294734|ref|YP_001118469.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166230620|sp|A4JBI1|SYL_BURVG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134137891|gb|ABO53634.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 864

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|332638200|ref|ZP_08417063.1| isoleucyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 929

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 13/121 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           GSD   G+         AV+ K    +VL    V    DG   KMSK  G+ I+   VV 
Sbjct: 556 GSDQYRGWFNSSLITGVAVTGKAPYKSVLSQGFV---LDGNGEKMSKSLGNIISPNEVVK 612

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
           E+G++ +R  +    +S  +      + + S+          Y + R+  R       D 
Sbjct: 613 EMGAEIIRLWVTSVDSSADVRVSMDLLSQTSE---------TYRKIRNTMRFLLANTADF 663

Query: 476 D 476
           D
Sbjct: 664 D 664


>gi|296282436|ref|ZP_06860434.1| cysteinyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 483

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 56/320 (17%), Positives = 104/320 (32%), Gaps = 47/320 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  D L   +++ GY++T    I D G                A  +    +
Sbjct: 42  HIGNMRAYVFADVLGRTLSWRGYKLTHIINITDVGH---------LTDDADAGEDKLEKM 92

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                  ++        A K     LN  E     +  DY  Q +      D        
Sbjct: 93  AAKQKQSIWDIAEHYTQAFKADVAALNIREPAEWSVATDYIEQMI------DFAKQIEAK 146

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRST 314
             +  E   +  D S + D        G +   +    + +              ++R+T
Sbjct: 147 HCYQLESGLYF-DVSTVED-------YGRLARAVTEEGEGRIDTVEGKRNAADFAIWRTT 198

Query: 315 MVGD----DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GY---VK 365
             G+    + D P  +    +    + +      +   FD  I+  G DH    +   + 
Sbjct: 199 PEGETRQMEWDSPWGRGAPGWHLECSVMGGKLLGF--PFD--IHTGGIDHREIHHPNEIA 254

Query: 366 RLEAVAAAVSEKKA---QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD-- 420
           + +A         A      + +     + R G   KMSK +G+F+ L+ ++D+ G    
Sbjct: 255 QNQAYCGCGGLDDAAHSGAKIWMHNNFLVERSG---KMSKSSGEFLRLQLLIDK-GYHPL 310

Query: 421 SVRFMMLWRKNSELLDFDFC 440
           + R M L       L+F + 
Sbjct: 311 AYRMMCLQAHYRSELEFSWE 330


>gi|281208129|gb|EFA82307.1| isoleucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 993

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 46/219 (21%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS- 152
           + +  R+      VS +   +     G K           G +H+GH     + D +   
Sbjct: 51  ANAATREHTLLKDVSELYKWQENNNTGEKWIFHDGPPYANGDLHLGHALNKTLKDFVNRY 110

Query: 153 -LMAFSGYEVTREYYINDA---GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208
            ++   GY+V    YI      G  I   A   F + +  L   D            ++ 
Sbjct: 111 KILR--GYKV---NYIPGWDCHGLPIEVKAFESFKKDRSLLKPKD------------VRK 153

Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268
           V  + A K                         +K   D  KA  I  D          G
Sbjct: 154 VATDFAKKE------------------------LKKQLDSFKAWGIVGDWDNHYRTMEPG 189

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 +    +  +GY+Y G+ P   S +++    D +
Sbjct: 190 YEVSQLETFYEMFLKGYIYRGVKPVHWSPSSKTALADAE 228


>gi|256810860|ref|YP_003128229.1| valyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794060|gb|ACV24729.1| valyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 878

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 19/187 (10%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ KK    +++  +V    DG   KMSK  G+ +    ++ + G+D++R   LW  NS
Sbjct: 504 ALTGKKPWDEIVINGMV-FGEDG--HKMSKSRGNVVEPDEIIAKYGADALR---LWASNS 557

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
            + D      KE         V Y Y   R  +   +     +  D+      P E   +
Sbjct: 558 VIGDDVPFLWKE---------VDYGYRFLRKFWNACRFAKMHISDDIIDELKKPME-ISN 607

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             +L ++  L      ++          +   +Y    V+H    +  E  + R    + 
Sbjct: 608 PIDLWILSKLQRLIERVDRDLENYRFNTIVE-IYKF--VWHEFCDNYIEMVKYRLYGNDE 664

Query: 553 RKLTMMR 559
                 R
Sbjct: 665 EAKKEAR 671


>gi|149915697|ref|ZP_01904223.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810589|gb|EDM70432.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 860

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 27/121 (22%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------ 152
            K   +   + I        K     +E     P+G +H+GH R   +GD +A       
Sbjct: 18  AKWQEAWDKAEIFRASRSADKPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKLSTG 76

Query: 153 --LMAFSGYEVTR---EY-------------YIN--DAGAQINTLALSVFWRYQQALYNN 192
             ++   G++      E              Y N  D  +Q+  L LS+ W  + A  + 
Sbjct: 77  HNVLHPMGWDAFGMPAENAAMAIGGHPKDWTYSNIADMRSQMKPLGLSIDWSREFATCDP 136

Query: 193 D 193
           +
Sbjct: 137 E 137


>gi|86152065|ref|ZP_01070277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840850|gb|EAQ58100.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 462

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 101/304 (33%), Gaps = 47/304 (15%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILP 292
           +   +  +K   +D++ LN+    F      +    + + D+I  LA+ G+VY  E  + 
Sbjct: 82  EEITEFYIKSYEEDMRVLNVLDPDFKPRATHY---ITAMLDLIKKLAKDGFVYTLEDGIY 138

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDV------DRPLLKSD----------GSYTYFAA 336
              SK  +   +  + L    + + ++V      D  L K D          G   +   
Sbjct: 139 FDTSKDEKYLSLSNRNLEENISRLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTE 198

Query: 337 DLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +A     +E   D     I ++   H     +             ++  +      +  
Sbjct: 199 CVAMIDSIFENTLDIHAGGIDLLFPHHENEATQCRCGCKR------KLANIWLHNGFVKI 252

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK   +   ++  + E   +++RF +L        ++    ++   K    FY
Sbjct: 253 DGE--KMSKSLNNSFFIKDALKEFMGEALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFY 310

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-----LQLIVHLAEYPRV 508
                       ++  D+    DFD+     I  E      E     L +   LA     
Sbjct: 311 ----------RLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISKALALLDDF 360

Query: 509 IENA 512
           I +A
Sbjct: 361 ISSA 364


>gi|86139175|ref|ZP_01057745.1| isoleucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824019|gb|EAQ44224.1| isoleucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 971

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 17/147 (11%)

Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRP-----LLKSDGSYTYFAADLA 339
           V   I+   +++       D  +  F       DD ++      +    GS   F     
Sbjct: 537 VNARIVAAFEAEGADAWYADGAKERFLGDGYKVDDWEQVFDVLDVWFDSGSTHAFV---- 592

Query: 340 YFKCKYERGFDNM--IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
             + + +   D +  +Y+ G+D   G+       A     +    NV+         DG 
Sbjct: 593 -LRDREDGSPDGIADVYMEGTDQHRGWFHSSLLQACGTKGRAPYKNVVTHGF---TLDGK 648

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVR 423
             KMSK  G+ I    +V + G+D +R
Sbjct: 649 GNKMSKSLGNTIVPEEIVKQYGADILR 675


>gi|329734417|gb|EGG70730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 916

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRIS-DEILKQTSD--------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|260769036|ref|ZP_05877970.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617066|gb|EEX42251.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 658

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 80/281 (28%), Gaps = 48/281 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 169 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 228

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS---YTYFAADLAYFKCKYERGFDNMI 353
            +D       S         G D D    K D +   Y +   D+ YF            
Sbjct: 229 WLDAPVGYMASFKNLCNKTDGLDFDEYW-KKDSTAELYHFIGKDIVYF------------ 275

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
                 HS +     A+      +K   NV +   V +       KMSK  G F+     
Sbjct: 276 ------HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKASTY 321

Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473
           ++ +  + +R+    + NS + D D        + N     +          R A  I  
Sbjct: 322 LNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNADVVNK----IVNLASRNAGFITK 377

Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLA---EYPRVIEN 511
             D  L      P+      +    I  L    E+ R I  
Sbjct: 378 RFDGKLSDSFAEPELYNEFVAAADRIAELYEAREFGRAIRE 418


>gi|260582922|ref|ZP_05850706.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094022|gb|EEW77926.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 682

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 66/215 (30%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D +    + SD   Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|281422107|ref|ZP_06253106.1| valine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403896|gb|EFB34576.1| valine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 893

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 23/242 (9%)

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRG 268
           +  AD     +++   E +    K+ + +  ++ I+D      I   ++       ++  
Sbjct: 379 QHFADIALPPVMDDDIEFYPKKYKN-TYRHWLENIKD----WCISRQLWWGHRIPAYYFD 433

Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
           +      ++   A +                 + + D     F S +       P+   D
Sbjct: 434 NAGKKDFVVAETAEEALKLAQEKNANIKAEDLEQESDCLDTWFSSWLW------PISLFD 487

Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388
           G       ++ Y+    +        V G D   +      + A    +  ++       
Sbjct: 488 GIEHPDNEEINYYYPTSDL-------VTGPD-IIFFWVARMIMAGYEYR-GKMPFKHVYF 538

Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF-MMLWRKNSELLDFDFCKVKEQSK 447
             + RD +  KMSK  G+      ++D+ G+D VR  MML       + FD    ++   
Sbjct: 539 TGIVRDKLGRKMSKSLGNSPDPLVLIDKFGADGVRMGMMLSAPAGNDILFDESLCEQGRN 598

Query: 448 EN 449
            N
Sbjct: 599 FN 600


>gi|126661985|ref|ZP_01732984.1| valyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625364|gb|EAZ96053.1| valyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 875

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 35/217 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +    +K     + +     +        + I     N TG +H+GH     + D L   
Sbjct: 8   AKEVEQKWYDYWMKNDYFTSKPDHRTPYTIVI--PPPNVTGVLHMGHMLNNTIQDVLIRR 65

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+        + A   I T A  V    ++ +  ND           +LKH   E 
Sbjct: 66  ARLKGFNACWVPGTDHA--SIATEAKVVAKLKEEGINKNDLT------REEFLKH-AWEW 116

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            DKY                           I + LK L    D   ++        + +
Sbjct: 117 TDKYG------------------------GTILEQLKQLGCSCDWSRTKFTMDDDMSASV 152

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                +L  +G +Y G          +    D + + 
Sbjct: 153 IHSFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIF 189


>gi|67922684|ref|ZP_00516188.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
 gi|67855466|gb|EAM50721.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
          Length = 853

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R  V+ D +A L    GY V
Sbjct: 42  PYPSGNLHMGHVRNYVITDVIARLKRLQGYRV 73


>gi|297619543|ref|YP_003707648.1| glutamyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378520|gb|ADI36675.1| glutamyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 574

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 30/152 (19%)

Query: 3   LFADFSSRLKNYLKEIDCKIK---VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59
           L  D  + +  YL +   K       K I+ +++ E P               L++ +  
Sbjct: 6   LSEDVKNVIIKYLLQNAIKYDGKPNPKSIMGKMLGENPDLRK-----------LAKDINQ 54

Query: 60  DPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118
           +   IA+  V  + ++     +  IA               +++        +       
Sbjct: 55  NISAIAKE-VEDMGLEAQKQKLSEIAP--------------EMMGKKKERKKKEIELKNV 99

Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
              K  +   + NP+GP+H+GH R +V+ D  
Sbjct: 100 DTKKGVVMRFAPNPSGPLHLGHARASVLNDFF 131


>gi|292669573|ref|ZP_06602999.1| isoleucyl-tRNA synthetase [Selenomonas noxia ATCC 43541]
 gi|292648782|gb|EFF66754.1| isoleucyl-tRNA synthetase [Selenomonas noxia ATCC 43541]
          Length = 1039

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 31/224 (13%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + +K    NV++   V+   D    KMSK  G+ +     +   
Sbjct: 555 DQTRGWFYSLIAISTLLFDKSPYKNVIVLGHVQ---DENGQKMSKSKGNAVEPMDALHRH 611

Query: 418 GSDSVRFMMLWRKNSELLD-FDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQAK 469
           G+D++R+         L + F    V+E +++          FYV YA     +      
Sbjct: 612 GADAIRWYFYENSAPWLPNRFSDDAVQEGARKFMGTLWNTYAFYVLYANIDAFN------ 665

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
                LD+D          S  +T    +   LA Y   +  A  A +      ++ +L+
Sbjct: 666 PTQHTLDYDRLSVMDRWVFSRLNTMVRTVDDCLANYR--VTEAAKALQ-----SFVEELS 718

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573
           +     +   R +    + +          L L  A+ + + + 
Sbjct: 719 N----WY--VRRSRSRFWAKGMEPDKVDAYLTLYTALVTTVKAA 756


>gi|254496566|ref|ZP_05109434.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354190|gb|EET12857.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 824

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +           +  +      K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PQEVEEQAQQYWHKKQSFNVSEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RALGKNV 73


>gi|254458347|ref|ZP_05071773.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085183|gb|EDZ62469.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 816

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           + + + K           +  +   K  K  I  +   P+G +H+GH R   + D  A  
Sbjct: 4   NSTTIEKKWQDYWAQNGSFEPSEDFKKEKKYILSMFPFPSGRLHMGHVRNYSISDAFARY 63

Query: 154 MAFSGYEV 161
                + V
Sbjct: 64  YRQQNFNV 71


>gi|189083247|sp|A1R6X5|SYL_ARTAT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 842

 Score = 39.5 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 96  SYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           + +      +     +    +   +  +  ++     P+G +H+GH     +GD +A  +
Sbjct: 28  AAMEAKWPQVWEDLKVFTPADDGSRERRYVLDMF-PYPSGDLHMGHAEAFAMGDVVARYL 86

Query: 155 AFSGYEV 161
              G++V
Sbjct: 87  RQKGFDV 93


>gi|301512245|ref|ZP_07237482.1| valyl-tRNA synthetase [Acinetobacter baumannii AB058]
          Length = 171

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 50/186 (26%), Gaps = 36/186 (19%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K   +    G        G G    I     N TG +H+GH     + D L       G 
Sbjct: 22  KWYKTWEEQGYFKP---SGHGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGK 78

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
               +   + AG     +                         G+    +G+E       
Sbjct: 79  NTLWQPGTDHAGIATQMVVERQL-----------------GLQGITRHDLGRE------- 114

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
               F E+ W    K+ S   + K IR     L    D          G  + ++++   
Sbjct: 115 ---KFIEKVWE--WKEQSGGTITKQIR----RLGSSVDWSRERFTMDEGLSNAVKEVFVR 165

Query: 280 LARQGY 285
           L   G 
Sbjct: 166 LHEDGL 171


>gi|269962055|ref|ZP_06176409.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833139|gb|EEZ87244.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 686

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 253

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G F+     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  + +R+    + NS + D D        + N
Sbjct: 348 NHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|260576328|ref|ZP_05844319.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021399|gb|EEW24704.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 998

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           ++ F   + V G D   +      +   ++    QI      L  L RD    KMSK  G
Sbjct: 594 QKYFPTSVLVTGQD-ILFFWVARMMMMQLAV-VGQIPFHTVYLHGLVRDAKGKKMSKSLG 651

Query: 406 DFITLRHVVDEVGSDSVRFM 425
           + I    ++D+ G+D++RF 
Sbjct: 652 NVIDPLEIIDDYGADALRFA 671


>gi|255038409|ref|YP_003089030.1| isoleucyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951165|gb|ACT95865.1| isoleucyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 1143

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 633 GVDQTRGWFFTLHAIAGMLFDSVAFKNVVSTGLV---LDKNGNKMSKRLGNAVDPFATLA 689

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFC 440
           + G D+ R+ M+      + L F+  
Sbjct: 690 QYGPDATRWYMITNAEPWDNLKFNID 715


>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68735029|sp|Q5JD45|SYC_PYRKO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 476

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 107/356 (30%), Gaps = 59/356 (16%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D   +I         +       +  +L
Sbjct: 38  HIGHARTYIAFDVIRRYLEHKGYTVLMVMNFTDIDDKI--------IKRANETGEDPKEL 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E +    Y     K L  K +       E           +Q ++  IR          
Sbjct: 90  AEKFLK--YFLEDMKALKVKPADIYPRVTE----------HIQDIIDFIRK--------- 128

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK-----TTQKCDMDRKQLLF 311
              + E  +       +   +      G + +  L              K + +   L  
Sbjct: 129 ---LQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPGEGKKNPEDFALWK 185

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKR 366
           ++       + P    +G   +               FD  I+  GSD     H   + +
Sbjct: 186 KAKPGEPKWESPW--GEGRPGWHIECSTMSTKYLGESFD--IHGGGSDLIFPHHENEIAQ 241

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
            EA       +  +  +       L  +G   KMSK  G+F+T+R  ++    + +R  +
Sbjct: 242 TEACT---GHEWVRYWMHTGF---LMVNGE--KMSKSLGNFVTIREALERYDPEVIRLFV 293

Query: 427 LWRKNSELLDFDFCKVKEQSKE-----NPVFYVQYAYARCRSIFRQAKDIFPDLDF 477
           L R     LD+    ++          N +  ++ A  R    F+  ++ F   + 
Sbjct: 294 LQRHYRSPLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEFEAYEA 349


>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|61216254|sp|Q747A2|SYC_GEOSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 481

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 104/323 (32%), Gaps = 56/323 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYE-VTREYY--IND--------AGAQINTLALSVFWRY 185
           H+GH R  VV D +   +  +GYE      Y  ++D         G   N ++      +
Sbjct: 38  HIGHARANVVFDMIYRYLRHAGYEVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAEF 97

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
            + +     DLP              ++ ++  ++   +  +  +      +    +K+ 
Sbjct: 98  DRDMAALGLDLPTYQPKATEHIAEMIQVIERLVAKGFAYAADGDVY-FSVEAFDQYLKLS 156

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
           + +L+ +     I + E   H  D       +   ++ G  Y      P  +      ++
Sbjct: 157 KRNLEEMQAGARIEVGEKKRHPMDF-----ALWKGSKPGEPYWD---SPWGQGRPGWHIE 208

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
              +  +                    Y            +  F +        H   + 
Sbjct: 209 CSAMSMK--------------------YLGETFDIHGGGKDLVFPH--------HENEIA 240

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425
           + EA      +  A+  +        + +    KMSK  G+F T++ V++   ++ +RF 
Sbjct: 241 QSEAAN---GKPFARYWIH-----NGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFF 292

Query: 426 MLWRKNSELLDFDFCKVKEQSKE 448
           +L       +DF    +KE +  
Sbjct: 293 LLSAHYRSPIDFSDQNLKEAAAG 315


>gi|117927385|ref|YP_871936.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647848|gb|ABK51950.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 539

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 21/139 (15%)

Query: 159 YEVTREYYINDA---GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           Y  T  YY+NDA   G    T+A  V  R+ +        L      G  +    +    
Sbjct: 6   YVTTPIYYVNDAPHIGHAYTTVAADVLARWHRQRGEPVWFLTGTDEHGQKVLRSAQAGGA 65

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                      E W P  ++                L+I +D FI            ++ 
Sbjct: 66  SPQEWADRLVAEAWQPTWRE----------------LDISYDDFI--RTTEPRHTGRVQA 107

Query: 276 IIDNLARQGYVYEGILPPP 294
            +  L  +G +YEG+   P
Sbjct: 108 FLQRLYEKGEIYEGVYEGP 126


>gi|242043012|ref|XP_002459377.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
 gi|241922754|gb|EER95898.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
          Length = 977

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 68/230 (29%), Gaps = 28/230 (12%)

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285
            EK L  V++  +  + +               +        G   P+  I+     + Y
Sbjct: 439 AEKALHAVENGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDY 498

Query: 286 VYEGILPPPKSKTTQKC--------DMDRKQLLFRSTM--VGDDVDRPLLKSDGSYTYFA 335
           +         +K  +K         D D     F S +          L K D  + Y +
Sbjct: 499 IVARTEEEALAKAQEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPDLSKEDYKHFYPS 558

Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
             L       E G D +          +      V   +      +      L  L RD 
Sbjct: 559 TVL-------ETGHDIL----------FFWVARMVMMGIEF-TGSVPFSYVYLHGLIRDA 600

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445
              KMSK  G+ I     + + G+D++RF +      + L+    ++   
Sbjct: 601 EGRKMSKTLGNVIDPLDTIKDYGTDALRFTLSLGTAGQDLNLSIERLTSN 650


>gi|47779360|gb|AAT38589.1| predicted leucyl tRNA synthetase [uncultured gamma proteobacterium
           eBACHOT4E07]
          Length = 801

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 13/209 (6%)

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
            ++K  S + +++    D      ++        +  GDP  I + ID       + +  
Sbjct: 394 ELIKLKSGKQLIQFRLRDWGVSRQRYWGCPIPVIYENGDPKVIDE-IDMPVELPKLKKNS 452

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
            P P S+     ++D   +L  S      +D     +  + +    ++     KY    D
Sbjct: 453 PPIPLSQNEDFINLDNS-ILRESDTFDTFMDSSWYYARFTSSNNNNEIFDENTKYWLPVD 511

Query: 351 NMIYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             +Y+ G +H+     Y +        +   E       LL + + L +DG   KMSK  
Sbjct: 512 --LYIGGIEHAILHLLYSRFFHKALRDIGLVEGDEPFKRLLTQGMVL-KDGA--KMSKSK 566

Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           G+ +  +  +++ G+D+VR  M++    E
Sbjct: 567 GNTVDPQSYIEKYGADTVRLYMMFTSPPE 595


>gi|15809895|gb|AAL06875.1| AT5g64050/MHJ24_3 [Arabidopsis thaliana]
 gi|17064968|gb|AAL32638.1| glutamate-tRNA ligase [Arabidopsis thaliana]
 gi|21387183|gb|AAM47995.1| glutamate-tRNA ligase [Arabidopsis thaliana]
          Length = 570

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 114/350 (32%), Gaps = 53/350 (15%)

Query: 93  LSPSYLRK-----ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           L+P++LR+        S     +      +  G  V + F + +PTG +HVG  R  +  
Sbjct: 19  LAPAFLRRRQSSLFYCSRRSFAVVACSTPVNNGGSVRVRF-APSPTGNLHVGGARTVLFN 77

Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYPG 203
              A   +  G  V R   I D    +            Q L     D  EG       G
Sbjct: 78  YLFAR--SKGGKFVLR---IED--TDLERSTRESEAAVLQDLSWLGLDWDEGPGVSGDFG 130

Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263
            Y +     L  +Y+ +LL         + + +     +  ++++   L     ++    
Sbjct: 131 PYRQSERNALYKQYAEKLLESG-----HVYRCFCSSEELVKMKEN-AKLKQLPPVYTG-- 182

Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323
                  +     I+    +G  +      PK  + +  D+ R ++ +    +GD     
Sbjct: 183 ----KWATASDAEIEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDF---V 235

Query: 324 LLKSDGSYTY---FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380
           +++S+G   Y      D A           ++I     +H     R   +  A+     Q
Sbjct: 236 VMRSNGQPVYNFCVTVDDAT------MAISHVIR--AEEHLPNTLRQALIYKALKFPMPQ 287

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---SDSVRFMML 427
                   V L       K+SKR G     +    E+G      V ++ L
Sbjct: 288 FAH-----VSLILAPDRSKLSKRHGATSVGQ--YREMGYLPQGMVNYLAL 330


>gi|42520309|ref|NP_966224.1| glutamyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|59798565|sp|Q73HV5|SYE1_WOLPM RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|42410047|gb|AAS14158.1| glutamyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 473

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 98/307 (31%), Gaps = 31/307 (10%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + +PTG +H+G  R A+     A      G          D          ++  
Sbjct: 4   IVTRFAPSPTGFLHIGGARTALFNWLYA---KHHGGRFLLRIEDTDRKRSTQEAIDAIIE 60

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             +    + D ++          K V   L +K  +     PE++          +  + 
Sbjct: 61  GLRWLGMSYDGEIVYQSKRIERHKEVANLLVEKGRAYHCYCPEDEVAEKKAKAREEGKIY 120

Query: 244 IIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             +   K  +        ++ + R G  S +R ++                P S+     
Sbjct: 121 KHKCTTKPPSCHPSSRHWKNMWSRAGMTSGVRSVV------------RFKVPDSQEIVID 168

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-S 361
           D    Q+   S  +    D  +L+SD + TY     A     ++ G  ++I   GSDH +
Sbjct: 169 DKIYGQIKVNSDQLD---DIVILRSDNTPTYIF---AVVVDDHDAGITDIIR--GSDHLT 220

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
              K L  +  A+     +        V L       K+SKR G      +    +   +
Sbjct: 221 NTFKHL-LIYQALDFDIPRFAH-----VPLIHGEDGNKLSKRHGATSVCDYEKMGILPKA 274

Query: 422 VRFMMLW 428
           +R  +L 
Sbjct: 275 MRNYLLR 281


>gi|119715257|ref|YP_922222.1| cysteine--tRNA ligase [Nocardioides sp. JS614]
 gi|119535918|gb|ABL80535.1| Cysteine--tRNA ligase [Nocardioides sp. JS614]
          Length = 390

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
           H+  V   EAV+      +AQ++      V   R G   KM+K +G+ + +  +++ +  
Sbjct: 255 HAYQVAMAEAVSGVAPFARAQLH------VGEVRIG-GQKMAKSSGNLVLVDDLLEHLPP 307

Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479
            ++R  +L R+ +E  DF+  ++ E  +     Y     A         + +  DLD   
Sbjct: 308 AALRLHLLHRRYAEPWDFEAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDV-- 365

Query: 480 FPRNVIPQESEFDTSELQLIVHL 502
            P  V     +   S  +LI  L
Sbjct: 366 -PTAVATALDQGGESARRLITQL 387


>gi|325973243|ref|YP_004250307.1| glutamyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651845|gb|ADX97927.1| glutamyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 483

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 102/284 (35%), Gaps = 48/284 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG  H+G  R A+V         GD +  +      + TR         Q   +  
Sbjct: 9   APSPTGEFHIGGLRTALVNFLYAKQNHGDFVLRIEDT---DQTR--------NQQEQVQK 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            + +     L  ++S +  G Y G YL+    E+  K   EL          + + +  +
Sbjct: 58  ILDYLESLLLIPDESFVCPGLY-GPYLQTQKIEIYKKRIQELFEKD-----RVYRCFCTE 111

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             ++  R++   L       +S            ++ ID     G  Y   L   +SK  
Sbjct: 112 EELEKEREENPYLYSGKCKHLS------------KEEIDEKLANGIPYCYRLKLDQSKEY 159

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
              D  R ++ F ++ +G+     L++S+G  TY   + A     YE    ++    G +
Sbjct: 160 VWEDYVRGKMTFPASSMGE---IILMRSNGLPTY---NFAVVVDDYEMKISDI--FRGEE 211

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
           H        A+  A   ++   N     L+     G   K+SKR
Sbjct: 212 HLSNTPYQIALYEAFGWEEFIPNFGHLSLIMSAETGK--KISKR 253


>gi|313200359|ref|YP_004039017.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439675|gb|ADQ83781.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 826

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +       +   +  +      K     +   P+G +H+GH R   +GD L+      
Sbjct: 10  IEQQAQQYWETHQTFAASEQSDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMK 69

Query: 158 GYEVT 162
           G+ V 
Sbjct: 70  GFNVM 74


>gi|308095126|ref|ZP_07663172.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308088891|gb|EFO38586.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 358

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 13/133 (9%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
              DG   KMSK  G+ +  + V +++G+D +R  +     +  +     ++ ++S +  
Sbjct: 15  FVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVS-DEILKRSAD-- 71

Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
                 AY R R+  R       +L+      +++P E         +   LA    +I 
Sbjct: 72  ------AYRRIRNTAR---FFLANLNGFNPATDIVPAEEMVALDRWAVGRALAAQEEII- 121

Query: 511 NATIAQEPYKLAF 523
            A      + +  
Sbjct: 122 KAYDEYNIHAVTQ 134


>gi|297537782|ref|YP_003673551.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257129|gb|ADI28974.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 836

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 33/171 (19%)

Query: 354 YVMGSDHS-------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           YV G +H+        +  +L      +   +  IN+L   +V         KMSK  G+
Sbjct: 546 YVGGIEHAILHLLYARFFNKLMRDVGLIKNDEPFINLLTQGMVL----KEGTKMSKSKGN 601

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +  + ++D  G+D+ R  M++    E             +                  R
Sbjct: 602 TVDPQELIDTYGADTARLFMMFAAPPEQ---SLEWADSGVEG------------ANRFLR 646

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQ 516
           +         +D      I   +  D T+EL+ I    +    IE      
Sbjct: 647 R----LWKASYDHLELGQIAAYTTGDLTAELKAIR--LQLHSTIEKVADDY 691



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 6/133 (4%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            +   +   +   +         K     +   P+G +H+GH R   +GD L+      G
Sbjct: 11  EQSAQTYWEANQTFAATEQSDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHKMKG 70

Query: 159 YEVTREYYINDAGAQINTLALS-----VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
           + V +    +  G      A+        W Y+  + +  S L +      + + +    
Sbjct: 71  FNVMQPMGWDAFGLPAENAAIKNNTAPAKWTYEN-IEHMKSQLKQLGLGVDWNREIATCK 129

Query: 214 ADKYSSELLNFPE 226
            + Y  E   F E
Sbjct: 130 PEYYKWEQWLFTE 142


>gi|253998286|ref|YP_003050349.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984965|gb|ACT49822.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 826

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +       +   +  +      K     +   P+G +H+GH R   +GD L+      
Sbjct: 10  IEQQAQQYWETHQTFAASEQSDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMK 69

Query: 158 GYEVT 162
           G+ V 
Sbjct: 70  GFNVM 74


>gi|46198378|ref|YP_004045.1| glutamyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|67461809|sp|Q72LI9|SYE_THET2 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|46196000|gb|AAS80418.1| glutamyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 468

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 96/284 (33%), Gaps = 38/284 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +  ++ +PTG  HVG    A+     A     +G          D    +      + 
Sbjct: 1   MVVTRIAPSPTGDPHVGTAYIALFNYAWAR---RNGGRFIVRIEDTDRARYVPGAEERIL 57

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    + D     G   G Y +     L  KY+ ELL     K     + +     +
Sbjct: 58  AALKWLGLSYDEGPDVGGPHGPYRQSERLPLYQKYAEELL-----KRGWAYRAFETPEEL 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQK 301
           + IR               E   + G    I  +  +  AR+G  +   L  P+  TT+ 
Sbjct: 113 EQIRK--------------EKGGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEV 158

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  +++ +  +    D  LLKSDG  TY  A++       +     +  V+ ++  
Sbjct: 159 KDELRGVVVYDNQEIP---DVVLLKSDGYPTYHLANV------VDDHLMGVTDVIRAEEW 209

Query: 362 GYVKRLEAVA-AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                +  +   A   +  +   +      L R+    K+SKR 
Sbjct: 210 LVSTPIHVLLYRAFGWEAPRFYHM-----PLLRNPDKTKISKRK 248


>gi|32171525|sp|Q898V2|SYL_CLOTE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 812

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%)

Query: 333 YFAADLAYFKCKY-ERGFD-NMI--------YVMGSDHS----GYVKRLEAVAAAVSEK- 377
           YF     Y   K  E+ FD  +I        YV G +H+     Y +        +    
Sbjct: 495 YFLR---YADNKNSEKAFDPKIINEILPVDKYVGGPEHACMHLLYARFFTKALRDMGYLN 551

Query: 378 -KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELL 435
                + L  + + L  DG  +KMSK  G+ I+    +DE GSD  R ++M     +E  
Sbjct: 552 FDEPFSSLTHQGLILGPDG--LKMSKSKGNTISPDDYIDEFGSDVFRMYLMFGFDYTEGG 609

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            +    +K  S+   V  V+   A CR       D    +D +    N +   S    +E
Sbjct: 610 AWSDEGIKSVSRF--VDRVERTLASCRYYINNPSDDKITIDNNEKDLNFVRHNSIKSITE 667


>gi|23097817|ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81747084|sp|Q8ET99|SYI2_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|22776041|dbj|BAC12318.1| isoleucyl tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 1022

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AV+   + K     VL    +    D    KMSK  G+ ++   +++
Sbjct: 542 GVDQTRGWFYSLLAVSTLFTGKTPYKRVLSLGHI---LDEHGRKMSKSKGNALSPVELIE 598

Query: 416 EVGSDSVRFMMLWR----KNSELLDFDFCKVKEQSKEN----PVFYVQYAYARCRSIFRQ 467
           E G+D++R+ +L       N         + K +  +       FY  YA     ++   
Sbjct: 599 EFGADALRWALLADSSPWNNKRFSKKTVSQAKSKVIDTILNVYSFYSMYADIDKFNVAEH 658

Query: 468 AKDIFPDLD 476
           A D    LD
Sbjct: 659 ATDAKTTLD 667


>gi|319896964|ref|YP_004135159.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432468|emb|CBY80824.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 684

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|302805957|ref|XP_002984729.1| hypothetical protein SELMODRAFT_120741 [Selaginella moellendorffii]
 gi|300147711|gb|EFJ14374.1| hypothetical protein SELMODRAFT_120741 [Selaginella moellendorffii]
          Length = 848

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 11/84 (13%)

Query: 69  VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
             + ++DP ++       G+     +P+ ++    S   +   +G +      K  +   
Sbjct: 3   AEKKRLDPTME------PGY-----NPADVQAGWYSWWEACGFFGADAASTEPKFVMVLP 51

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS 152
             N TG +H+GH     V D L  
Sbjct: 52  PPNVTGHLHLGHALTVSVQDALVR 75


>gi|255020628|ref|ZP_05292690.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969864|gb|EET27364.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 680

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 52/214 (24%), Gaps = 38/214 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
            L         +I          + + +          +     Y GI  P         
Sbjct: 191 TLSDFADFLQEWIHSGTLQEEMANKLDEWFKAGLADWDISRDAPYFGIPIPDTEGKFFYV 250

Query: 303 DMDR-----KQLLFRSTMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIYV 355
            +D                G D D        S  Y +   D+ YF              
Sbjct: 251 WLDALPGYMAATTHWCEEHGRDFDTYWGAQAQSEVYHFIGKDIIYF-------------- 296

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               H+ +     A+      +          +     +G   KMSK  G  IT    ++
Sbjct: 297 ----HALF---WPAMLKGAGYRLPTAIFTHGFM---TVNGA--KMSKSRGTSITAARYLE 344

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +  + +R+    + N    D D        K N
Sbjct: 345 RLEPEFLRYYFASKLNPRPEDIDLNLEDFLLKGN 378


>gi|255505470|ref|ZP_05346302.3| glutamate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255267814|gb|EET61019.1| glutamate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 469

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 108/290 (37%), Gaps = 46/290 (15%)

Query: 136 MHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ-- 187
           MHVG+ R A+    +A       L+     +  R              AL + +R  +  
Sbjct: 1   MHVGNLRTALYAYLIAKHEGGDFLLRIEDTDQER----------FVEGALEIIYRTLEHA 50

Query: 188 -ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
              ++   D+ +GY P V  +   + +  +Y+ +L+   E  +        ++++ + I 
Sbjct: 51  GLKHDEGPDIDKGYGPYVQSERQAQGIYLEYAKKLIEKGE-AYYCFCDKERLESLKQEIA 109

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
                +  +H + +S+++      + +  +I                  ++ T K + D 
Sbjct: 110 GKEIVVYDKHCLHLSKEEVQAKLDAGVPYVI-------------RQNVPNEGTTKFEDDI 156

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366
              +       DD+   L+KSDG  TY   + A     +  G  ++  V G+++     +
Sbjct: 157 YGTIEVPNAELDDM--ILIKSDGFPTY---NFANVVDDHLMGITHV--VRGNEYLSSAPK 209

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
              +  A   +     + +     L  D    K+SKR+G   +   ++D+
Sbjct: 210 YNRLYEAFGWE-----IPVYVHCPLITDENHKKLSKRSGHS-SYEDLLDQ 253


>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 504

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ + LR  + +V  +++RF  L       L F   K    ++    ++
Sbjct: 279 DLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPLSFS-DKALADAETRMEYF 337

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
            +          R+  +     DF   P +  PQ
Sbjct: 338 YE--------TLRKVDERISGKDFGKGPLHGDPQ 363


>gi|33519776|ref|NP_878608.1| leucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|48428534|sp|Q7VRA6|SYL_BLOFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33504121|emb|CAD83383.1| leucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 867

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + +I+         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PHQIERIVQQHWNDNQTFSVTEDKNKQKFYCLSMLPYPSGNLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|326390738|ref|ZP_08212292.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993275|gb|EGD51713.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 879

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 42/249 (16%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      +  K+     +L     L 
Sbjct: 470 TEDLRYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFM--KEVPFKHVLIHG--LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V+++ G+D++RF ++        D  F + K +   N  F
Sbjct: 519 RDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGN-DMRFSQDKVELSRN--F 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A    +         D D +L+   +   +             L  Y  +++  
Sbjct: 576 ANKLWNASRYVLLN-----LTDNDTNLYTEGLTIADKWI----------LTRYNNIVKEV 620

Query: 513 TIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           T   E ++L   A  LYD   S F   +      P L       +K+T   L        
Sbjct: 621 TENLEKFELGIAATKLYDFVWSEFCDWY-IELSKPVLYSDNLEAKKVTKSVL------RY 673

Query: 569 IINSGLNII 577
           ++++ L ++
Sbjct: 674 VLDNTLRLL 682


>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 916

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 99/309 (32%), Gaps = 57/309 (18%)

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRG 268
           K   ++L+  EE    +  D+    +  +IRD  +          +   +F +E+     
Sbjct: 418 KVRQDILDAIEETNFKV--DWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIM 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
               +  I D  A  G            + EG   P         + D   + F S    
Sbjct: 476 TKETVNHIADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGS-- 533

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
               R +L++                + E  F   +Y  GSD   G+       A A   
Sbjct: 534 --SHRSVLET----------------RPELSFPADLYFEGSDQYRGWFNSSITTAVATRG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     +L    V    DG   KMSK  G+ I    VV + G+D  R  +        + 
Sbjct: 576 QAPYKFLLSHGFVM---DGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVR 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496
               ++ +Q+ +         Y + R+  R       D +    P +    E+E    + 
Sbjct: 633 IS-DEILKQTSD--------VYRKIRNTLRFMLGNINDYN----PESDYIPENELLDVDR 679

Query: 497 QLIVHLAEY 505
            L+  L E+
Sbjct: 680 YLLNRLREF 688


>gi|88607061|ref|YP_505129.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598124|gb|ABD43594.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 837

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R  V+GD +A      G+ V
Sbjct: 46  PYPSGNIHMGHIRNYVIGDVIARFKRAKGFSV 77


>gi|323142861|ref|ZP_08077573.1| leucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417403|gb|EFY08025.1| leucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 863

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N+  +P  +   +         +         K     +   P+G +H+GH R   +GD 
Sbjct: 5   NVAYNPQEIEPQIQKFWEEHKTFHATEDKNKEKYYCLVMFPYPSGRLHMGHVRNYTIGDV 64

Query: 150 LASLMAFSGYEVT 162
           +A      G  V 
Sbjct: 65  IARYNRLLGKNVM 77


>gi|320101257|ref|YP_004176849.1| valyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753609|gb|ADV65367.1| valyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 815

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 77/270 (28%), Gaps = 49/270 (18%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN-IEFVSANPTGPMHVGHCRCAVVGDTL 150
              P   R++L      GI   +   G   ++  I+      +G  HVG        D +
Sbjct: 13  RWDPGRERELLDKWEGEGIHEFKADPGDPREIIAIDTPPPYASGKWHVGGAAHYAQIDMV 72

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A      GY V   +Y +  G  +       +      L    S  PEG           
Sbjct: 73  ARYFRMKGYNVLVPFYADRNGLPVEVQVEKAYKVNPHKL----SSTPEG----------- 117

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +E   K   E L+  E   + + +                 L      + +  D      
Sbjct: 118 REHFLKLCREFLDKAERDIVSVWR----------------RLGCSFQYWKNGTDSEEYRR 161

Query: 271 SPIRDIIDNLARQGYVYEGILPP---------PKSKTTQKCDMD--RKQLLFRSTMVGDD 319
              +     L ++G +YE   P                +  + D     + F+    G+ 
Sbjct: 162 -ITQATFIELYKKGLIYEAERPVNWCPRCRTSLADAELEYVEEDTYLYYIRFQVKETGEH 220

Query: 320 VDRP-----LLKSDGSYTYFAADLAYFKCK 344
           +        LL+S  +  Y   D  Y K K
Sbjct: 221 LVVATTRPELLRSCKALVYHPGDERYSKYK 250


>gi|303236223|ref|ZP_07322820.1| glutamate--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483596|gb|EFL46594.1| glutamate--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 505

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 99/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A     +G E+       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFAR---QNGGEIVFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   +Q      D  +  G   G Y +   +++  KY ++LL   +  ++       
Sbjct: 57  EEYILEAFQWLGIKFDEGVSFGGEYGPYRQSERRDIYKKYVNQLLEAGK-AYIAFDTPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++A  K I                     R   +  ++ ++ L   G  Y         +
Sbjct: 116 LEAKRKEI--------ANFQYDAHTRMQMRNALTLPKEEVEKLINDGEQYVVRFKIEPGE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                DM R  +  ++ ++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 EVHVDDMIRGDVCIKTEILD---DKVLYKSADELPTYH---LANIVDDHLMLISHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+ L  +G   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPRFAHLPLL-LKPEGKG-KLSKRDGD 267


>gi|302841440|ref|XP_002952265.1| hypothetical protein VOLCADRAFT_81773 [Volvox carteri f.
           nagariensis]
 gi|300262530|gb|EFJ46736.1| hypothetical protein VOLCADRAFT_81773 [Volvox carteri f.
           nagariensis]
          Length = 1197

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  ++ A+   K     L+C  + L  DG   KMSKR  ++     V+D
Sbjct: 584 GLDQTRGWFYTLMVLSTAL-FDKPAFKHLVCNGLVLAADGK--KMSKRLKNYPDPTEVID 640

Query: 416 EVGSDSVRFMMLWRK--NSELLDFD 438
           + G+D++R  ++      +E L F 
Sbjct: 641 KYGADALRLYLINSPVVRAETLRFK 665


>gi|58337125|ref|YP_193710.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311485|sp|Q5FKU5|SYI_LACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58254442|gb|AAV42679.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 927

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 56/281 (19%), Positives = 95/281 (33%), Gaps = 50/281 (17%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           +A      L      K++P      +  M+K  R D      +A  +   IF +ED    
Sbjct: 415 IAPFRDQILEQIDNAKFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPI 473

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  I +   ++G            + EG             + D   + F S   
Sbjct: 474 VTPETIEHIAEIFDKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDS--- 530

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + K DG   ++ ADL               Y+ GSD   G+       + AV+
Sbjct: 531 GSSWSGVMEKRDG--LHYPADL---------------YLEGSDQYRGWFNSSLITSVAVT 573

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   V+  +G++ +R  +     +  +
Sbjct: 574 GKAPYKEVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQADTTSDV 630

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                 +++ ++         +Y + R+ FR       D D
Sbjct: 631 AVSMGILQQSAE---------SYRKIRNTFRYMLANTSDFD 662


>gi|55820807|ref|YP_139249.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822708|ref|YP_141149.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820317|sp|Q5M0C5|SYI_STRT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81820480|sp|Q5M4X2|SYI_STRT2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55736792|gb|AAV60434.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738693|gb|AAV62334.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 929

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225
           ++  A   +N ++  +  R +         +P     G+ ++ V      K   +     
Sbjct: 64  HVGHA---MNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV----LAKQGVKRKELD 116

Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH----RGDPSPIRDIIDNLA 281
             ++L + +DY++ + +   R+D K L +  D    E+ +       + + IR +   +A
Sbjct: 117 RAEYLKMCRDYAL-SQVDKQREDFKRLGVSAD---WENPYVTLTPDYEAAQIR-VFGEMA 171

Query: 282 RQGYVYEGILPPPKS 296
           ++GY+Y+G  P   S
Sbjct: 172 KKGYIYQGAKPVYWS 186


>gi|124265411|ref|YP_001019415.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|189030288|sp|A2SC91|SYL_METPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124258186|gb|ABM93180.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 897

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +     +   +   +         K     +   P+G +H+GH R   + D +A  +
Sbjct: 14  PGAIEAAAHAHWTARDAHRVVEDTSRPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYL 73

Query: 155 AFSGYEV 161
              GY V
Sbjct: 74  RMKGYNV 80


>gi|290999074|ref|XP_002682105.1| arginyltransferase 1-like protein [Naegleria gruberi]
 gi|284095731|gb|EFC49361.1| arginyltransferase 1-like protein [Naegleria gruberi]
          Length = 547

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 20/131 (15%)

Query: 9   SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD---PLTIA 65
            +LK  L+++  K +++    +  ++  P       ++ +    L +  G        +A
Sbjct: 181 EKLKEQLEQVFEKQRIQTNQKNPNLLSTP-------IAFSI-FGLQKKFGCKEIEKKELA 232

Query: 66  ELIVARIKIDPDVD----SVFIAGKGFINL-----YLSPSYLRKILSSIVVSGIEYGRNL 116
           E IV+ +      +    S+ I   G+IN+      L  ++ +            + R  
Sbjct: 233 EKIVSLLNEHSWEETYHISIKIEENGYINIELLDKQLKKNFEQSKQKESTQKEAIHPRLH 292

Query: 117 IGKGTKVNIEF 127
             K   ++ E+
Sbjct: 293 EIKTVLMDSEY 303


>gi|257457671|ref|ZP_05622838.1| isoleucine-tRNA ligase [Treponema vincentii ATCC 35580]
 gi|257445057|gb|EEV20133.1| isoleucine-tRNA ligase [Treponema vincentii ATCC 35580]
          Length = 1101

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 83/226 (36%), Gaps = 29/226 (12%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +AAA+ ++ A  N ++  LV L  DG   KMSK   ++     VV 
Sbjct: 588 GLDQTRGWFYTLTVLAAALFDRPAFKNCIVNGLV-LASDGK--KMSKSLRNYTDPNEVVG 644

Query: 416 EVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFR 466
           + G+D++R  ++      +E L +    V++  K        +  FYV YA     +   
Sbjct: 645 QFGADALRLFLMHSNVVKAEDLKYSDEGVRDVLKGILIPLWNSYSFYVTYANIDGVTPPA 704

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK----LA 522
            AK    D     F + +      +  S  +    + +    +  A    +  K    + 
Sbjct: 705 HAKLDGADAHIGAFVKELNNPLDRWILSVTE--KLVLD----VTAALDDYDLSKAIDPIV 758

Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
            Y+  L    +  +   R + R  +   N+         L  A+  
Sbjct: 759 AYIEQL----NNWY--IRRSRRRFWKSENDGDKVQAYETLYRALKK 798


>gi|325980977|ref|YP_004293379.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530496|gb|ADZ25217.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 881

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R   +GD L+      G+ V
Sbjct: 42  PYPSGKLHMGHVRNYTIGDVLSRYHRMQGFNV 73


>gi|183179484|ref|ZP_02957695.1| glutamyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|183012895|gb|EDT88195.1| glutamyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 472

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 61  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|55981036|ref|YP_144333.1| isoleucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296710|sp|P56690|SYI_THET8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55772449|dbj|BAD70890.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) (IleRS)
           [Thermus thermophilus HB8]
          Length = 1043

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 33/219 (15%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +   +    A  NV+   L+    D    KMSK  G+ +    ++ 
Sbjct: 551 GIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLI---LDEKGQKMSKSKGNVVDPWDIIR 607

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D++R ++ +         F    V+E  ++          F+V YA          
Sbjct: 608 EFGADALRWYIYVSAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYA---------- 657

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527
                   + D       P   +    +  L+  + +  + +  A  A +P   A  L D
Sbjct: 658 --------NLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEALEAYDPTTSARALRD 709

Query: 528 -LASVFHGHWSHGRENPRLRFVQANNRKLTMMRL--QLV 563
            +       +         +   A +R+     L   LV
Sbjct: 710 FVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALV 748


>gi|28378066|ref|NP_784958.1| leucyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556279|ref|YP_003062696.1| leucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300769231|ref|ZP_07079119.1| leucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180248|ref|YP_003924376.1| leucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|32171523|sp|Q88XA9|SYL_LACPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28270900|emb|CAD63805.1| leucine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045206|gb|ACT61999.1| leucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300493260|gb|EFK28440.1| leucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045739|gb|ADN98282.1| leucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 808

 Score = 39.5 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
           +  G+ + + +  D L  +    + + P    ++      D   ++  +   G      +
Sbjct: 437 WEDGETTLVPE--DELPLRLPATKNLEPSGTGESPLANIDDWVNVVDENGRKGKRETNTM 494

Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAA 373
            +  GS  YF   +     +    +D +       +YV G++H+     Y +        
Sbjct: 495 PQWAGSSWYFLRYVDPHNREALADYDKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYD 554

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
           +     +          +       KMSK  G+ +    +VD+ G+D++R
Sbjct: 555 LGVVPTKEPFQKLVNQGMILGDNHEKMSKSRGNVVNPDDIVDQYGADTLR 604


>gi|307566452|ref|ZP_07628886.1| valine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307344840|gb|EFN90243.1| valine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 898

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +      + A    +  +          + RD    KMSK  G+      ++D+ G+D V
Sbjct: 518 FFWVARMIMAGYEYR-GKFPFKHVYFTGIVRDKKGRKMSKSLGNSPDPLELIDKFGADGV 576

Query: 423 RF-MMLWRKNSELLDFDFCKVKEQSKEN 449
           R  MML       + FD    ++    N
Sbjct: 577 RMGMMLSAPAGNDILFDEALCEQGRNFN 604


>gi|297626062|ref|YP_003687825.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921827|emb|CBL56387.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 842

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +     +   +   +          +  +  ++     P+G +H+GH     +GD LA  
Sbjct: 24  AAEAKWQKYWAEHETFKASDAPDDKRQRRYVLDMF-PYPSGDLHMGHAEAYAMGDVLARS 82

Query: 154 MAFSGYEVT 162
               G+ V 
Sbjct: 83  WRMQGFNVM 91


>gi|257063414|ref|YP_003143086.1| leucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791067|gb|ACV21737.1| leucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 852

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   +   + +    +   +  K  +E     P+G +H+GH R   +GD  A      G+
Sbjct: 12  RWQKAWEEADLYKVADDSDRPKKYVLEMF-PYPSGDIHMGHARNYTIGDVTARYATMRGF 70

Query: 160 EV 161
           +V
Sbjct: 71  DV 72


>gi|167839404|ref|ZP_02466088.1| putative leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 728

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  L     S       +  +      K  I  +    TG +H+GH R  V+ D  A   
Sbjct: 17  PQTLEPRWQSAWRDARLFDADPRPGRPKWFIVELPPFATGQLHMGHARNYVLADADARFR 76

Query: 155 AFSGYEV 161
              GY V
Sbjct: 77  RMQGYNV 83


>gi|295692697|ref|YP_003601307.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030803|emb|CBL50282.1| Isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 928

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 97/280 (34%), Gaps = 51/280 (18%)

Query: 215 DKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK+  ++L+  ++    P      +  M+K  R D      +A  +   IF +EDD    
Sbjct: 417 DKFRDQILDQIKKASFIPEWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDDTPIV 475

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317
            P  I  I     ++G            + EG           + + D   + F S   G
Sbjct: 476 TPETIEHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPHGEFRKETDILDVWFDS---G 532

Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376
                 + K +G                   F   +Y+ GSD   G+       + AV+ 
Sbjct: 533 TSWSGVMSKREG-----------------LHFPANLYLEGSDQYRGWFNSSLITSVAVTG 575

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436
           +     VL    V    D    KMSK  G+ I+   V+ ++G++ +R  +     +  + 
Sbjct: 576 QAPYKQVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQADTTSDVA 632

Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                +++ ++         +Y + R+ FR       D D
Sbjct: 633 VSMGILQQSAE---------SYRKIRNTFRYMLANTSDFD 663


>gi|256113493|ref|ZP_05454327.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994876|ref|ZP_06107433.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765989|gb|EEZ11778.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|119872747|ref|YP_930754.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166231635|sp|A1RTX9|SYL_PYRIL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119674155|gb|ABL88411.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 945

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 3/68 (4%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            ++    + +           +         K  I      P G +H+GH R  ++ D L
Sbjct: 7   FFIE---IAERWQKRWKESRVFEPEPTPGVAKYFITAAYPYPNGAVHIGHGRTYLIADVL 63

Query: 151 ASLMAFSG 158
           A      G
Sbjct: 64  ARFYRHMG 71


>gi|558850|gb|AAA91296.1| isoleucyl-tRNA synthetase [Campylobacter jejuni]
          Length = 917

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESTPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  A+   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRASKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|327286779|ref|XP_003228107.1| PREDICTED: valyl-tRNA synthetase-like [Anolis carolinensis]
          Length = 1149

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 64/226 (28%), Gaps = 48/226 (21%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           +  P Y R+ ++     GI                    N TG +H+GH     + D+L 
Sbjct: 310 FFKPEYGRRCVAEPNPRGIFMMCIPP------------PNVTGSLHLGHALTNAIQDSLT 357

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 G                +   ++     ++ L+            G     +G+
Sbjct: 358 RWHRMKGETTL-------WNPGCDHAGIATQVVVEKKLWKE---------QGKTRHDLGR 401

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           EL  K   +  N   ++                I   LK L    D   +          
Sbjct: 402 ELFIKEVWKWKNEKGDR----------------IYHQLKKLGSSMDWDRACFTMDPKLSR 445

Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
            + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 446 AVEEAFIRLHEEGVIYRSKRLVNWSCTLNSAISDIEVDKKELTGRT 491


>gi|307265322|ref|ZP_07546879.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919606|gb|EFN49823.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 879

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 42/249 (16%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      +  K+     +L     L 
Sbjct: 470 TEDLRYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFM--KEVPFKHVLIHG--LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V+++ G+D++RF ++        D  F + K +   N  F
Sbjct: 519 RDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGN-DMRFSQDKVELSRN--F 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A    +         D D +L+   +   +             L  Y  +++  
Sbjct: 576 ANKLWNASRYVLLN-----LTDNDTNLYTEGLTIADKWI----------LTRYNNIVKEV 620

Query: 513 TIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           T   E ++L   A  LYD   S F   +      P L       +K+T   L        
Sbjct: 621 TENLEKFELGIAATKLYDFVWSEFCDWY-IELSKPVLYSDNLEAKKVTKSVL------RY 673

Query: 569 IINSGLNII 577
           ++++ L ++
Sbjct: 674 VLDNTLRLL 682


>gi|254701707|ref|ZP_05163535.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752258|ref|ZP_05995967.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261742011|gb|EEY29937.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|254786566|ref|YP_003073995.1| glutamyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237687518|gb|ACR14782.1| glutamate--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 500

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 116/330 (35%), Gaps = 44/330 (13%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA-GAQINTLALSVFWRYQ 186
           ++ +PTG  HVG    A+     A     +G  V R   I D    +    +        
Sbjct: 7   IAPSPTGDPHVGTAYIALFNLCFAR--KHNGKFVLR---IEDTDQTRSTPESEQAILDSL 61

Query: 187 QALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           + L  +  + P+ G   G Y +   K++  +Y  ELL           K Y     ++ +
Sbjct: 62  RWLGLDWDEGPDVGGEFGPYRQSERKDIYGQYVDELLAKGL-----AFKCYRTTEELETL 116

Query: 246 RDDLKALNIQH-----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
           R + K   I       D+ +SE++ H  +   +  ++            ++ P ++ T  
Sbjct: 117 RAERKEAGIHSALKPSDLRLSEEEQHAREAQGMPYVV-----------RMVVPEEAGTCA 165

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R  +    ++V     + LLKSDG  TY    LA     +  G  ++I   G + 
Sbjct: 166 VNDMLRGTMDLDWSLVD---AQILLKSDGMPTYH---LANVVDDHLMGITHVIR--GEEW 217

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA-GDFITLRHVVDEVGS 419
                + + +          +       + L R+    K+SKR     I     +  +  
Sbjct: 218 INSAPKHQLLYEYFGWDMPVLCH-----LPLLRNPDKTKLSKRKNPTSILYYKRMGFLAE 272

Query: 420 DSVRFM--MLWRKNSELLDFDFCKVKEQSK 447
             + ++  M W    E   F    + EQ  
Sbjct: 273 ALLNYLGRMGWSMPDEREKFSLNDMLEQFD 302


>gi|225852457|ref|YP_002732690.1| valyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264051|ref|ZP_05466583.1| valyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640822|gb|ACO00736.1| valyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094236|gb|EEZ18113.1| valyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408971|gb|ADZ66036.1| valyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538685|gb|ADZ86900.1| valyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|161618903|ref|YP_001592790.1| valyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566502|ref|ZP_05836972.1| valyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335714|gb|ABX62019.1| valyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156020|gb|EEW91100.1| valyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|86606068|ref|YP_474831.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554610|gb|ABC99568.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 516

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 74/486 (15%), Positives = 159/486 (32%), Gaps = 84/486 (17%)

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
           +V+A P    H+G     +  D +A      G +V      ++ G +I   A       Q
Sbjct: 14  YVNAAP----HIGSAYTTLAADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEERGLPPQ 69

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--I 244
           Q      +   +             +L D      +   + +   IV+++  +   +  I
Sbjct: 70  QHCDEIAAQFAQL-----------WQLLDIRYDRFIRTTDPRHKAIVREFFQRVWDRGDI 118

Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDPSPI--RDIIDNLARQGYV-----YEGILPPPKS 296
                +    +  + F  E +   G   P+     ++    + Y      Y+  L    +
Sbjct: 119 FVGRQQGWYCVACEEFKDESELLEGGFCPLHPNKKVEWKDEENYFFRLSRYQEKLEALYA 178

Query: 297 KTTQKCDMDRKQL----LFRSTMVGDDVDRPLLK------SDGSYT----------YFAA 336
           +  +    + ++       +  +    + RP +       +D S T          Y +A
Sbjct: 179 EHPEFIQPESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPSQTLYVWFDALINYLSA 238

Query: 337 -----DLAYFKCKYERGFDNMIYVMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCE 387
                D    +    R +   ++++G D    H+ Y     A+  +      +       
Sbjct: 239 AVDPEDEPTLENALRRYWPADVHLVGKDIVRFHAIY---WPAMLMSAGLPLPRQIFGHGF 295

Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFD---FCKVK 443
              L +DG  +KM K  G+ +    +V   G+D+VR+  L   +  +  DF    F +V 
Sbjct: 296 ---LTKDG--LKMGKSLGNTLDPFELVQRYGADAVRYYFLTEIELGKDGDFSEGRFIEVL 350

Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503
                N +  +     R  ++ ++ +  +        P   IP +         L   LA
Sbjct: 351 NADLANDLGNLL---NRTLNMLKKYQPDYR------IPAVEIPADHPL----KTLAERLA 397

Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563
             P  + +A    +P   A     LA   + +     + P     Q  + ++  +   ++
Sbjct: 398 --P-TVADAYERLDPSSAARKALSLAQASNKYLD--EQAPWTLHKQGQSEQVAQILYAVL 452

Query: 564 HAVASI 569
            +V  +
Sbjct: 453 ESVRWV 458


>gi|48478263|ref|YP_023969.1| leucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430911|gb|AAT43776.1| leucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 891

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 16/189 (8%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162
                       + I +  K  +        G +HVGH R   +GD +A      GY V 
Sbjct: 9   WQEEWKKNHVFESRIDERPKFFVTVPWPYTNGSLHVGHGRTYTLGDIVARYKRLEGYNVL 68

Query: 163 REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPGVYLKH-------VGKEL 213
                +++G  I   +  +     +   LY +  +  E       L         +    
Sbjct: 69  FPMGFHESGTPILAFSERLRENDPETIKLYRSYLEEYENKENIDKLIESFKEPENIANYF 128

Query: 214 ADKYSSELLNFPEE-KWLPIV--KDYSVQAMMKIIRDDLKALNI----QHDIFISEDDFH 266
           ADK   +  +      W       D   Q ++K   + LK L +     + I  S  D +
Sbjct: 129 ADKIIKDFTSLGYSIDWTRRFTSADPDYQEIVKWQFNKLKELKLIKQGNYPILYSVKDEN 188

Query: 267 RGDPSPIRD 275
                 I+D
Sbjct: 189 AVGEDDIKD 197


>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 476

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 93/330 (28%), Gaps = 90/330 (27%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   +   GY V       D                           
Sbjct: 38  HLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTD--------------------------- 70

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                    +       A +   +     E               +K+  +D+ AL ++ 
Sbjct: 71  ---------IDDKIIRRARETGEDPKELAE-------------KFIKVFLEDMNALKVKP 108

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG----------ILPPPKSKTTQKCDMDR 306
                    H GD   I D I  L  +GY YEG               K    +  ++ +
Sbjct: 109 ADIYPRVTEHIGD---IIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRK 165

Query: 307 KQLLFRSTMVGDDVDRPLLKS-------------DGSYTYFAADLAYFKCKYERGFDNMI 353
              +       +  D  L K              +G   +               FD  I
Sbjct: 166 GARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFD--I 223

Query: 354 YVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +  G+D     H   + + EA           +   L     + +     KMSK  G+F+
Sbjct: 224 HGGGNDLIFPHHENEIAQSEAC-----FGHEWVRYWLHTGFVMVKG---EKMSKSLGNFV 275

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           T+R ++     + +RF +L +     LD+ 
Sbjct: 276 TVRELLQRYSPEVIRFFVLQKHYRSPLDYS 305


>gi|227833480|ref|YP_002835187.1| Isoleucyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184468|ref|ZP_06043889.1| isoleucyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454496|gb|ACP33249.1| Isoleucyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 1065

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+   + A++ A+ ++ A   V+   +V L  DG  +KMSK  G++  +  V D  GSD
Sbjct: 598 RGWFYVMHALSTALFDRPAYKKVVAHGIV-LGNDG--LKMSKSKGNYPNVNEVFDRDGSD 654

Query: 421 SVRFMMLW 428
           ++R+ ++ 
Sbjct: 655 AMRWFLMS 662


>gi|218532446|ref|YP_002423262.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218524749|gb|ACK85334.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 522

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 116/406 (28%), Gaps = 46/406 (11%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P G  H+GH    +  D +A      G +V      ++ G +I   A       +  + +
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQTASRAGVTPRAFVDD 79

Query: 192 NDSDLPEGYYPGV--YLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIR 246
                          Y + +    AD Y++             + + K     ++     
Sbjct: 80  MAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAGWYSVRDEAY 139

Query: 247 DDLKALNIQHD------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294
            D     +  D             ++ E+++          ++   A Q       L P 
Sbjct: 140 YDEAETTLGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLYAEQ----PDFLGPE 195

Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN--- 351
                    +         +    D   P+    G   Y   D A        GF +   
Sbjct: 196 TRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVD-ALTNYLTVTGFPDAQA 254

Query: 352 --------MIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                    ++++G D    + R  AV   A  +S        +      L R     KM
Sbjct: 255 PNARFWPASLHIIGKD----IVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG---EKM 307

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKENPVFYVQ-YAY 458
           SK  G+ +    +V   G D VR+ +L         ++D   +  +   +    +   A 
Sbjct: 308 SKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGNLAQ 367

Query: 459 ARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLA 503
                I +  +   P+   F      ++   +        L+ +LA
Sbjct: 368 RSLSMITKNCEGAVPEPGAFTEADERLLAAAAALPEKARGLMQNLA 413


>gi|58585043|ref|YP_198616.1| valyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311597|sp|Q5GRK0|SYV_WOLTR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58419359|gb|AAW71374.1| Valyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 855

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 63/203 (31%), Gaps = 39/203 (19%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   +I+       +    K     I+      +G +H+GH       D +A      G 
Sbjct: 12  ENKYNILWEDSRVYKWDGKKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGK 71

Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219
           ++   Y I                        +D+ LP         K   +E+  +   
Sbjct: 72  DIF--YPIG----------------------FDDNGLPTERLVEQTYKTRAREVGREKFI 107

Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279
           E+ +   EK     K+             L+++ I +D  +      +   +  +    +
Sbjct: 108 EMCHEVIEKSKQEFKEL------------LRSVGISYDWSLEYHTISKETVTLSQMSFID 155

Query: 280 LARQGYVY---EGILPPPKSKTT 299
           L  +GY Y   + IL  P  KT 
Sbjct: 156 LYNKGYAYRKMQPILWDPVDKTA 178


>gi|34541222|ref|NP_905701.1| glutamyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932027|sp|Q7MUF7|SYE_PORGI RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|34397538|gb|AAQ66600.1| glutamyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 505

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 25/280 (8%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTGP+H+G  R A+     A      G ++       D+   +      +    +  
Sbjct: 11  APSPTGPLHIGGVRTALYNYLFARQH---GGDMILRIEDTDSNRFVPGAEAYIIEALEWL 67

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               D  +  G   G Y +   +++   Y  +LL+            +     ++  R +
Sbjct: 68  GIKFDEGVGYGGRFGPYRQSERRDIYRTYVRQLLDSG-----RAYIAFDTPEELEARRAE 122

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +     Q+D         R   +   + ++ L  +G  Y        +   +  D+ R +
Sbjct: 123 VPNF--QYDATTRGQ--MRNSLTLPAEEVERLVAEGTQYVVRFLVEPNLDVEVNDLIRGR 178

Query: 309 LLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  S+++    D+ L KS D   TY    LA     +     ++I   G +        
Sbjct: 179 VVINSSILD---DKVLYKSADDLPTYH---LANIVDDHLMEVSHVIR--GEEWLPSAPLH 230

Query: 368 EAVAAAVSEKKAQINV-LLCELVRLYRDGMPIKMSKRAGD 406
             +  A   +        L  L++   +G   K+SKR GD
Sbjct: 231 VLLYRAFGWEDTMPRFAHLALLLKPEGNG---KLSKRDGD 267


>gi|484950|pir||PN0474 valine-tRNA ligase (EC 6.1.1.9) (version 2) - human  (fragment)
          Length = 1051

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 62/224 (27%), Gaps = 39/224 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF--VSANPTGPMHVGHCRCAVVGDTLASL 153
           +              EYG  +  +  +          N TG +H+GH     + D+L   
Sbjct: 107 AAWYPWWEQQGFFKPEYGLLMCQQNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRW 166

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G         + AG     +     WR +                         +L
Sbjct: 167 HRMRGETTLWNPGCDHAGIATQVVVEKKLWRDEGL--------------------SRHQL 206

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            + +  E+  + EEK   I                LK L    D   +         + +
Sbjct: 207 VEAFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAAV 253

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
            +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 254 TEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 297


>gi|116495760|ref|YP_807494.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|301067316|ref|YP_003789339.1| cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116105910|gb|ABJ71052.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|300439723|gb|ADK19489.1| Cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 444

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 110/314 (35%), Gaps = 58/314 (18%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-------LS 180
                   +H+G+ R A+  DT+     + GY+VT      D   +I   A       L 
Sbjct: 4   CGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYKVTYVSNFTDVDDKIINAAHKTGEAPLD 63

Query: 181 VFWRYQQALYNNDSDL---PEGYYPGV-----YLKHVGKELADKYSSELLNFPEEKWLPI 232
           +  R+  A   + + L   P   +P        +    ++L DK  +  ++         
Sbjct: 64  LAQRFIDAFMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAYAVDGDVYYRARK 123

Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            K Y   +   +  D+L+    QH   I++D+  + +  PI   +   A+ G +      
Sbjct: 124 FKHYGELSHQNV--DELEEGASQH---ITQDELAKKE-DPIDFALWKAAKPGEISW---E 174

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P  K      ++    +  + ++GD  D      D  + +   ++A  + K ++ F   
Sbjct: 175 SPWGKGRPGWHIE--CSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEAKTDKQFVRY 232

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  H+G+V         + E                      KMSK  G+FIT+  
Sbjct: 233 WM-----HNGFVT--------IGEDD-------------------EKMSKSLGNFITVHD 260

Query: 413 VVDEVGSDSVRFMM 426
           +   V    +RF M
Sbjct: 261 IRKTVDPQVLRFFM 274


>gi|239995443|ref|ZP_04715967.1| cysteinyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 460

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 101/315 (32%), Gaps = 45/315 (14%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D L   M   G +V    Y+      I  +   +  R  +   + ++  
Sbjct: 37  HMGHARTYLSFDVLVRYMRHLGLDVK---YV----RNITDIDDKIIARANENGESFEALT 89

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
                     + +     D  +  LL    E  +    D  +  + +++           
Sbjct: 90  A---------RTIAMMHEDFAAINLLEPDVEPTVSGHMDEIIAIIQRLMDKGYAYQAKSG 140

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
           D+      +        +D +D L        G      +      D     +L+++T  
Sbjct: 141 DVLFDVSKYEDYGKLSKQD-LDQLKA------GARVEVAAGKDDPLDF----VLWKTTKP 189

Query: 317 GDDV-DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAV 370
           G+     P    +G   +     A         FD  I+  GSD     H   V +    
Sbjct: 190 GEPAWQSPW--GEGRPGWHIECSAMNHKHLGAHFD--IHGGGSDLTFPHHENEVAQSCCA 245

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
                     +NV +   +    D    KMSK  G+F TLR V+ E  S+++RF ++   
Sbjct: 246 -----YDTPYVNVWMHAGMVQVND---EKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAH 297

Query: 431 NSELLDFDFCKVKEQ 445
               L +    + + 
Sbjct: 298 YRSQLSYSQDNITQA 312


>gi|90581608|ref|ZP_01237399.1| leucyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437191|gb|EAS62391.1| leucyl-tRNA synthetase [Vibrio angustum S14]
          Length = 857

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQDIEQKVQEHWDNKKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEVT 162
              G  V 
Sbjct: 67  RLQGKNVM 74


>gi|17987310|ref|NP_539944.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260563967|ref|ZP_05834453.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|81851832|sp|Q8YGX8|SYV_BRUME RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|17982990|gb|AAL52208.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260153983|gb|EEW89075.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|330470026|ref|YP_004407769.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812997|gb|AEB47169.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 854

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           D    KMSK  G+ +T   ++++ G+D+VR+     +    L FD  ++K
Sbjct: 581 DPDRKKMSKSKGNVVTPMGLLEQHGADAVRYWASTGRPGVDLAFDPAQIK 630


>gi|304392702|ref|ZP_07374642.1| leucyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295332|gb|EFL89692.1| leucyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 887

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
             SP+ +     +       +           T   +E     P+G +H+GH R   +GD
Sbjct: 5   RYSPADVEHKWQARWDDAKLFEAKSEPDPDAQTYYVLEMF-PYPSGRIHMGHVRNYAMGD 63

Query: 149 TLASLMAFSGYEV 161
            +A      G+EV
Sbjct: 64  VIARYKRAKGFEV 76


>gi|295111687|emb|CBL28437.1| methionyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 650

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 260 ISEDDFHRGDPSPIRDIIDNLAR--QGYV----YEGILPPPKSKTTQKCDMDRKQLLFRS 313
           + E+ +       +  +I++  +  +G +    Y  I+   K +   +  + R  L +  
Sbjct: 159 MKEESYFFRGSRYVPQLIEHYEKHLKGVMPRIRYNEIMSFLKGEVRDQS-VSRTTLKWGI 217

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCK--YERGFDNMIYVMGSDHSGYVKRLEAVA 371
            + GD+     +  D    Y +A + Y   +  ++R + ++ +V+G D    + R   V 
Sbjct: 218 PVPGDEKHVIYVWFDALINYASA-IGYLDDRSTFDRYWPHVRHVVGKD----IIRFHCVI 272

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
             +      + + +  +   +      KMSK  G+ +    VV+E G D  R+ +L  
Sbjct: 273 WPLMLLALGLPLPVSIVAHGWWTVDGEKMSKSRGNVVDPCRVVEEYGLDPFRYFLLRE 330


>gi|256751768|ref|ZP_05492641.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749296|gb|EEU62327.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 879

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 42/249 (16%)

Query: 335 AADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
             DL YF        G+D +I+   +        +      +  K+     +L     L 
Sbjct: 470 TEDLRYFYPTDVLVTGYD-IIFFWVAR------MIFMSLEFM--KEVPFKHVLIHG--LV 518

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           RD    KMSK  G+ I    V+++ G+D++RF ++        D  F + K +   N  F
Sbjct: 519 RDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGN-DMRFSQDKVELSRN--F 575

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
             +   A    +         D D +L+   +   +             L  Y  +++  
Sbjct: 576 ANKLWNASRYVLLN-----LTDNDTNLYTEGLTIADKWI----------LTRYNNIVKEV 620

Query: 513 TIAQEPYKL---AFYLYDLA-SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568
           T   E ++L   A  LYD   S F   +      P L       +K+T   L        
Sbjct: 621 TENLEKFELGIAATKLYDFVWSEFCDWY-IELSKPVLYSDNLEAKKVTKSVL------RY 673

Query: 569 IINSGLNII 577
           ++++ L ++
Sbjct: 674 VLDNTLRLL 682


>gi|227530427|ref|ZP_03960476.1| leucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227349659|gb|EEJ39950.1| leucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 814

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +   +      +       KMSK  G+ +
Sbjct: 536 LYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGANHEKMSKSKGNVV 595

Query: 409 TLRHVVDEVGSDSVR 423
               +V++ G+D++R
Sbjct: 596 NPDDIVEKYGADTLR 610


>gi|221194428|ref|ZP_03567485.1| valyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185332|gb|EEE17722.1| valyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 895

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELLDFDF 439
            + +      L +DG   +MSK  G+ +    ++ + G+D++R+ +L    N++ + FD 
Sbjct: 509 FHDVFIYATILAKDG--SRMSKSKGNGVNPMDLIAKYGADAMRYNLLTLITNNQDVKFDA 566

Query: 440 CKVKEQSK 447
              K+  +
Sbjct: 567 VLDKKTKE 574


>gi|114798943|ref|YP_760487.1| glutamyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123323231|sp|Q0C1A6|SYE1_HYPNA RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|114739117|gb|ABI77242.1| glutamyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 486

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 12/91 (13%)

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKA 379
           D  +L++DG+ TY    LA     ++ G  ++I   G DH     +++  +  A+     
Sbjct: 191 DLVMLRADGTPTYM---LAVVVDDHDMGITHVIR--GDDHLRNTFRQVP-IYEAMGWSVP 244

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
             +      V +       K+SKR G   T 
Sbjct: 245 NFSH-----VPMIHGNDGAKLSKRHGALSTT 270


>gi|116627611|ref|YP_820230.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267791|sp|Q03L88|SYI_STRTD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116100888|gb|ABJ66034.1| Isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278132|gb|ADQ62789.1| Isoleucyl-tRNA synthetase IleS [Streptococcus thermophilus ND03]
          Length = 929

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH----R 267
           ++  K   +       ++L + +DY++ + +   R+D K L +  D    E+ +      
Sbjct: 103 QVLAKQGVKRKELDRAEYLKMCRDYAL-SQVDKQREDFKRLGVSAD---WENPYVTLTPD 158

Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKS 296
            + + IR +   +A++GY+Y+G  P   S
Sbjct: 159 YEAAQIR-VFGEMAKKGYIYQGAKPVYWS 186


>gi|255747087|ref|ZP_05421032.1| glutamyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161369|ref|ZP_06030479.1| glutamyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262167760|ref|ZP_06035462.1| glutamyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262192123|ref|ZP_06050284.1| glutamyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|172044573|sp|P0C6Q1|SYE_VIBCH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|172047752|sp|A5F649|SYE_VIBC3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|255735489|gb|EET90889.1| glutamyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262023825|gb|EEY42524.1| glutamyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262028680|gb|EEY47334.1| glutamyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262031972|gb|EEY50549.1| glutamyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|327484733|gb|AEA79140.1| Glutamyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 474

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 40/280 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G E      I D    +     +      + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLYA---KSQGGEFVLR--IED--TDLERSTQAAVDAIIEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     +  EG Y          ++ D+  +E             K Y+ + ++  IR +
Sbjct: 61  MTWLGLEWDEGPYYQTKRFDRYNQVIDQLLAEG---------KAYKCYAPKELLDEIRAE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +A            +  R D +  +   +++ A++G         PK  +    D  R 
Sbjct: 112 QEA----------NKEMPRYDANHPKIKAVNDAAKEGEPCCIRFRNPKEGSVVFDDQIRG 161

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
           ++  R+  +    D  + ++DG+ TY   +        + G  ++I   G DH     R 
Sbjct: 162 RIEIRNDQLD---DLIIRRTDGTPTY---NFCVVVDDVDMGISHVIR--GEDHINNTPRQ 213

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
             +  A+    A I       + L  DG   K+SKR G  
Sbjct: 214 INIYKAMG---ATIPTFAHCAMILGDDGA--KLSKRHGAV 248


>gi|328950389|ref|YP_004367724.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450713|gb|AEB11614.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 867

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 50/198 (25%), Gaps = 34/198 (17%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
              P  +    +        +  N         I     N TG +H+GH     + D L 
Sbjct: 8   TYDPHAVEPRWAEKWAQ-HPFTANPKSGKKPFVIFMPPPNVTGNLHMGHALDNALQDALI 66

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                 GYE                                   LP   + G+  + V +
Sbjct: 67  RYKRMRGYEAL--------------------------------WLPGTDHAGIATQVVVE 94

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
            L  K  +       E +L  V ++   +   IIR  LK L    D              
Sbjct: 95  RLLAKEGTTRHALGREAFLKRVWEWKETSGGAIIRQ-LKRLGASPDWSREAFTMDEARSR 153

Query: 272 PIRDIIDNLARQGYVYEG 289
            +R        +G  Y  
Sbjct: 154 AVRYAFVRYYHEGLAYRA 171


>gi|322707000|gb|EFY98579.1| valyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 1075

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 57/207 (27%), Gaps = 40/207 (19%)

Query: 90  NLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTK-----VNIEFVSANPTGPMHVGHCRC 143
           N     P  +             +       G         I     N TG +H+GH   
Sbjct: 114 NFKAYDPIAVESAWYDWWEKEGFFKPEFTPDGKVKEAGSFVIVHPPPNVTGSLHMGH--- 170

Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203
             +GD+L  LM        R   +N           +  W            LP   + G
Sbjct: 171 -ALGDSLQDLM-------IRWNRMN---------GKTTLW------------LPGCDHAG 201

Query: 204 VYLKH-VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262
           +  +  V K L  K      +    K++  V ++  +   K I   L  +    D     
Sbjct: 202 ISTQSVVEKMLWRKEGKTRHDLGRTKFVETVWEWK-EEYHKRINKALTHMGSSFDWSREA 260

Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEG 289
                   + + +    L  +G +Y  
Sbjct: 261 FTMDANLSAAVAETFVRLHEEGIIYRA 287


>gi|239980679|ref|ZP_04703203.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452539|ref|ZP_06591929.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355488|gb|EFE82390.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 538

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 108/332 (32%), Gaps = 57/332 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI---------------NTLALSV 181
           H+GH    V GD L       G +V      ++ G +I               + L    
Sbjct: 28  HLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTADANGVSPQEWCDKLVTEA 87

Query: 182 FWRYQQALYNNDSDL--PEGYYPGVYLKHVGKELADK-------YSSELLNFPEE----- 227
           +    + L   + D            ++   ++L DK       Y        EE     
Sbjct: 88  WKPLWEHLEIANDDFIRTTEKRHTDRVQEFVQDLWDKGEIYKGGYEGPYCVGCEEYKLPG 147

Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQ-HDIFISED-----DFHRGDPSPIRDIIDNLA 281
           + L    D++ + +  + +  ++ L  + +   +SE      DF+  +P  I+       
Sbjct: 148 ELLDGEGDFAGEKLCPVHKKPVEILKEENYFFKLSEYAQRLLDFYEANPGFIQPESARNE 207

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD-LAY 340
              +V +G+     S++T    +          +  DD     +  D    Y  A     
Sbjct: 208 VLNFVRQGLTDLSISRSTFDWGVK---------VPWDDKHVIYVWVDALLNYATAAGYGA 258

Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG----M 396
            + +++  F   ++++G D    + R  AV          +   L    R+  +G     
Sbjct: 259 DQARFDATFPADVHLVGKD----ILRFHAVI----WPAMLMAQGLPLPGRVVANGWLLVG 310

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             KMSK     I  + +    G D+ R+  L 
Sbjct: 311 GEKMSKSNLTGIKPQDLTSHFGVDAYRWYFLR 342


>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 440

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 64/410 (15%), Positives = 128/410 (31%), Gaps = 59/410 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V DT+   + + GYEV    Y+++     + L  +       
Sbjct: 4   CGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYEVQ---YVSNFTDVDDKLIKAANEL--- 57

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                D       +   Y + V   L  K+++      E        D  ++ + ++++ 
Sbjct: 58  ---GEDVPTIADRFVEAYFEDV-TALGCKHATVHPRVTENM------DIIIEFIEELVKK 107

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A   + D++    +F        + I D       +  G       K     D    
Sbjct: 108 GY-AYESEGDVYYKTKEFEGYGKLSHQPIAD-------LRHGARIEVGEKKQDPLDF--- 156

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       + P  K    +    + +A    KY     + I +            
Sbjct: 157 ALWKAAKEGEIFWESPWGKGRPGWHIECSAMA---RKY---LGDTIDIHAGGQDLTFPHH 210

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A       +       +   Y +    KMSK  G+FI +  ++ +     +RF ML
Sbjct: 211 ENEIAQSEALTGK-TFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFML 269

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  ++F    +  QS  N +  ++ AY   +     + D                 
Sbjct: 270 SVHYRHPINFSEELL--QSTNNGLERIKTAYGNLKHRMESSTD----------------- 310

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIA--QEPYKLAFYLYDLASVFHGH 535
               D +E  L+  + ++    E A          +   LY+LA+  + +
Sbjct: 311 --LTDHNEKWLV-EIEKFQLAFEEAMNDDFNTANAITE-LYNLANHANQY 356


>gi|189083227|sp|A1S8S8|SYL_SHEAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   +         +         K     +   P+G +H+GH R   +GD +A      
Sbjct: 10  IEAEVQKYWADNKTFEVTEDPAKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQ 69

Query: 158 GYEV 161
           G  V
Sbjct: 70  GKNV 73


>gi|148559909|ref|YP_001258918.1| valyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371166|gb|ABQ61145.1| valyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|103486422|ref|YP_615983.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|122985147|sp|Q1GUM2|SYV_SPHAL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|98976499|gb|ABF52650.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 931

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           GFD +++   +               + E   +   L      L R     KMSK  G+ 
Sbjct: 512 GFD-ILFFWDAR------MAMQGMEFMGEVPWRTLYLHG----LVRAPDGQKMSKSKGNV 560

Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           +    ++D+ G+D++RF M   ++    D      +     N
Sbjct: 561 VDPIGLIDQYGADALRFFMCAMESQGR-DIKMDDARLAGYRN 601


>gi|119774061|ref|YP_926801.1| isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229766|sp|A1S425|SYI_SHEAM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119766561|gb|ABL99131.1| Isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 940

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 27/204 (13%)

Query: 228 KWLPIVKDYSVQAM------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281
           +W+P      ++ M        I R     + I   +    ++ H    S +  + + + 
Sbjct: 445 QWIPDWGQSRIETMVANRPDWCISRQRTWGVPITLFVNKENEELHPNSVSLMERVANRIE 504

Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLAY 340
           + G                  D+D  +LL         V   L +  D   T+    +A 
Sbjct: 505 QHG-------------IQAWWDLDAAELLGDEAEQYRKVTDTLDVWYDSGSTFETV-VAA 550

Query: 341 FKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
                  G D  +Y+ GSD   G+      ++ A+  K     VL         DG   K
Sbjct: 551 RPEFQGHGVD--LYLEGSDQHRGWFMSSLMLSTAMHAKAPYKQVLTHGF---TVDGKGRK 605

Query: 400 MSKRAGDFITLRHVVDEVGSDSVR 423
           MSK  G+ I  + V +++G+D +R
Sbjct: 606 MSKSIGNVIAPQEVTNKLGADILR 629


>gi|57505460|ref|ZP_00371388.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016285|gb|EAL53071.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 454

 Score = 39.5 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 116/385 (30%), Gaps = 66/385 (17%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R ++  D L  ++   G +                      +  +     +D  L
Sbjct: 34  HLGHARSSICFDLLRRVLLSLGRK---------------------LYFARNYTDIDDKIL 72

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            +    G  L+ + ++    Y  ++ N       P +K  + + + ++I   L  L  Q 
Sbjct: 73  KKMQESGESLEQITQKYIAHYERDMKNL--RVLEPDLKPKATEYIKQMIELILH-LQRQG 129

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             +  ED  +           D L+     +E        +  +K + D     F     
Sbjct: 130 FTYTLEDGIYFDTS----KDKDYLSLSKRSFEDNQTRLNEQKEKKNEADFVLWKFDEGFY 185

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL--EAVAAAV 374
                +      G   + +  +A  +  ++   D  I+  G D   +      EA     
Sbjct: 186 AAPFGK------GRPGWHSECVAMIEALFKDSLD--IHAGGVD--LFFPHHENEAAQCRC 235

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
           +  K   +  L      + +    KMSK   +   +   + E   +++RF ++       
Sbjct: 236 AFNKNLASHWLHNG---FVNINGEKMSKSLNNSFFIEDALKEFSGEALRFYLMSVHYRAH 292

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT- 493
            ++    +                  C+    +   +   LD +L        E E    
Sbjct: 293 FNYSLEDLS----------------LCKKRLDKLYRLKKRLDLNLLEDKPKKCERELSLT 336

Query: 494 ------SELQLIVHLAEYPRVIENA 512
                  +L +   LA +   I NA
Sbjct: 337 ILQALQDDLNISKALALFDEFIANA 361


>gi|320352452|ref|YP_004193791.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320120954|gb|ADW16500.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 648

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 19/146 (13%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
             +      +  A+  +  +   +         +    KMSK  G+ +  R +V+  G D
Sbjct: 261 KPHAIYWPTMLRAMGLEPYRRLHVHGYW-----NVDATKMSKSLGNVVRPRELVETYGVD 315

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS---IFRQAKDIFPDLDF 477
           +VR+ +L R+ S  LD  F      ++ N            RS   I + A    P+ + 
Sbjct: 316 TVRYFVL-REMSFGLDSSFSSDAILARHNADLANDLGNLFSRSLTMIDKYAAGRVPEPE- 373

Query: 478 DLFPRNVIPQESEFDTSELQLIVHLA 503
                      + F   + +L+  +A
Sbjct: 374 ---------TAALFAPEDRELMSAIA 390


>gi|302869817|ref|YP_003838454.1| tRNA synthetase valyl/leucyl anticodon-binding [Micromonospora
           aurantiaca ATCC 27029]
 gi|302572676|gb|ADL48878.1| tRNA synthetase valyl/leucyl anticodon-binding [Micromonospora
           aurantiaca ATCC 27029]
          Length = 870

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           D    KMSK  G+ +T   +++  GSD+VR+     K    L FD  +VK
Sbjct: 597 DPDRKKMSKSKGNVVTPMALLERNGSDAVRYWAANGKPGMDLAFDPAQVK 646


>gi|299535363|ref|ZP_07048685.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729124|gb|EFI69677.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     K     L  + + L       KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEG--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    ++   G+D++R
Sbjct: 584 VVNPDEIITSHGADTLR 600


>gi|315501280|ref|YP_004080167.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Micromonospora sp. L5]
 gi|315407899|gb|ADU06016.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Micromonospora sp. L5]
          Length = 870

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443
           D    KMSK  G+ +T   +++  GSD+VR+     K    L FD  +VK
Sbjct: 597 DPDRKKMSKSKGNVVTPMALLERNGSDAVRYWAANGKPGMDLAFDPAQVK 646


>gi|239979443|ref|ZP_04701967.1| valyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291451313|ref|ZP_06590703.1| valyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291354262|gb|EFE81164.1| valyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 873

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 33/195 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ +   L    V    +  +   +  +  I     N TG +H+GH     + D L    
Sbjct: 21  PADVEGKLYERWVERGYFEADEHSENPRYAIVISPPNVTGSLHLGHAFEHTLIDALTRRK 80

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              GYE   +  ++ AG     +                               V +ELA
Sbjct: 81  RMQGYETLWQPGMDHAGIATQNV-------------------------------VERELA 109

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
            K      +   E ++  V  +  ++    I   ++ L               G    ++
Sbjct: 110 -KEGKSRHDLGREAFIERVWKWKNESG-GQISGQMRRLGDGVAWSRERFTMDEGLSRAVQ 167

Query: 275 DIIDNLARQGYVYEG 289
            +   +     +Y  
Sbjct: 168 TVFKKMYEDELIYRA 182


>gi|238026215|ref|YP_002910446.1| leucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875409|gb|ACR27742.1| Leucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 864

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQRDWRDADAYLTKEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|227903700|ref|ZP_04021505.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868587|gb|EEJ76008.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 927

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 56/281 (19%), Positives = 95/281 (33%), Gaps = 50/281 (17%)

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHR 267
           +A      L      K++P      +  M+K  R D      +A  +   IF +ED    
Sbjct: 415 IAPFRDQILEQIDNAKFIPSWGKTRLYNMIKD-RGDWVISRQRAWGVPLPIFYAEDGTPI 473

Query: 268 GDPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
             P  I  I +   ++G            + EG             + D   + F S   
Sbjct: 474 VTPETIEHIAEIFDKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDS--- 530

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVS 375
           G      + K DG   ++ ADL               Y+ GSD   G+       + AV+
Sbjct: 531 GSSWSGVMEKRDG--LHYPADL---------------YLEGSDQYRGWFNSSLITSVAVT 573

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435
            K     VL    V    D    KMSK  G+ I+   V+  +G++ +R  +     +  +
Sbjct: 574 GKAPYKEVLSQGFV---LDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQADTTSDV 630

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
                 +++ ++         +Y + R+ FR       D D
Sbjct: 631 AVSMGILQQSAE---------SYRKIRNTFRYMLANTSDFD 662


>gi|149912309|ref|ZP_01900876.1| glutamyl-tRNA synthetase [Moritella sp. PE36]
 gi|149804612|gb|EDM64676.1| glutamyl-tRNA synthetase [Moritella sp. PE36]
          Length = 470

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 88/279 (31%), Gaps = 42/279 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G +      I D    +            + 
Sbjct: 8   APSPTGYLHVGGARTALYSWLHA---KSQGGKFVLR--IED--TDVERSTQEAVDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +     D  EG +          EL D+  SE     ++ +        +  + +  +  
Sbjct: 61  MKWAGLDWDEGPFFQTQRFDRYNELVDQLLSE-----DKAYKCYCSRARLDELRE--KQM 113

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               N ++D   S           I D        G  Y      PK  T    D  R +
Sbjct: 114 AAKENPRYDGKCSH--------GDIEDT-------GADYVVRFRNPKEGTVIVDDKIRGK 158

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           + F +  +    D  + ++DGS TY   +       ++ G  N+  V G DH     R  
Sbjct: 159 VEFANKELD---DLIIRRTDGSPTY---NFCVVVDDWDMGITNV--VRGEDHLNNTPRQI 210

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        V +       K+SKR G  
Sbjct: 211 NILKALGAPIPE-----YAHVAMILGDDGAKLSKRHGAV 244


>gi|78186311|ref|YP_374354.1| isoleucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|78166213|gb|ABB23311.1| Isoleucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 1089

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L AV+  + ++ A  N+++   +    D    KMSK  G+ +     + 
Sbjct: 591 GVDQTRGWFYTLHAVSTLLFDRPAYRNLIVNGHI---LDKNGQKMSKSKGNVVDPFETMQ 647

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + G+D++R+ +L          F+  +++E+ ++       +  F+V YA
Sbjct: 648 KYGADAIRWYLLVASPPWRPKSFNTEEIEEEQRKFFRAYINSYNFFVLYA 697


>gi|23501832|ref|NP_697959.1| valyl-tRNA synthetase [Brucella suis 1330]
 gi|254704249|ref|ZP_05166077.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754917|ref|ZP_05998626.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|81752694|sp|Q8G0Y3|SYV_BRUSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23347767|gb|AAN29874.1| valyl-tRNA synthetase [Brucella suis 1330]
 gi|261744670|gb|EEY32596.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|119775714|ref|YP_928454.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119768214|gb|ABM00785.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 864

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 21/64 (32%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +   +         +         K     +   P+G +H+GH R   +GD +A      
Sbjct: 15  IEAEVQKYWADNKTFEVTEDPAKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQ 74

Query: 158 GYEV 161
           G  V
Sbjct: 75  GKNV 78


>gi|307545709|ref|YP_003898188.1| glutamyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217733|emb|CBV43003.1| glutamyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 492

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 106/343 (30%), Gaps = 49/343 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTG  HVG    A+     A       ++     +  R             +  S+
Sbjct: 7   IAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDRLRS-----TAESEQMILDSL 61

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
            W   +     D   P     G Y +    ++  +Y+ +LL+          K Y     
Sbjct: 62  RWLGLEWDEGPDVGGP----HGPYRQSERGDIYVEYARQLLDAG-----HAFKCYRTSEE 112

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           +  +RD+ KA                 D +     +    R+G+ +   +  P   T   
Sbjct: 113 LDALRDERKAAGQHLA-------LKPDDLALPEAEVARREREGWPHVVRMKVPADGTCVV 165

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM R  +            + LLKSDG  TY    LA     +  G  +++   G +  
Sbjct: 166 EDMLRGTI---EVDWAQVDAQILLKSDGMPTYH---LANVVDDHLMGITHVLR--GEEWI 217

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA-GDFITLRHVVDEVGSD 420
               + + +          +  +      L R+    K+SKR     I     +  +   
Sbjct: 218 NSAPKHQLLYEYFGWPMPSLCHM-----PLLRNPDKSKLSKRKNPTSINYYRRMGFLPQA 272

Query: 421 SVRFM--MLWRKNSELLDFDFCKVKEQSK------ENPVFYVQ 455
              ++  M W    E   F   ++             PVF +Q
Sbjct: 273 VANYLGRMGWSMPDEREKFTLDEMMAHFDIQRVSLGGPVFDLQ 315


>gi|282896678|ref|ZP_06304686.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Raphidiopsis
           brookii D9]
 gi|281198396|gb|EFA73284.1| Valyl-tRNA synthetase  (Valine--tRNA ligase) (ValRS) [Raphidiopsis
           brookii D9]
          Length = 1045

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 19/175 (10%)

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
           D  Y       GFD +I+         V R+  +A   + K     V +  LV   RD  
Sbjct: 506 DAYYPTTTLVTGFD-IIFFW-------VARMTMMAGHFTGKMPFQTVYIHGLV---RDEN 554

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK A + I    ++D+ G+D++R+ ++        D      +++ +      V+ 
Sbjct: 555 KQKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDRKKDES---VSVEA 611

Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511
           +      ++  A+ +  +LD     +   PQ  E     +     L+ Y +V++ 
Sbjct: 612 SRNFANKLWNAARFVMMNLDGQTPEQLGEPQGIELSDRWI-----LSRYHQVVKQ 661


>gi|257866299|ref|ZP_05645952.1| glutamyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873185|ref|ZP_05652838.1| glutamyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257800257|gb|EEV29285.1| glutamyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807349|gb|EEV36171.1| glutamyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 485

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 92/297 (30%), Gaps = 38/297 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI----NDAGAQINTLALSVFWR 184
           + +PTG +H+G+ R A+     A            E+ I     D    I          
Sbjct: 9   APSPTGHLHIGNARTALFNYLFAR-------HNDGEFIIRIEDTDQKRNIED-GEKSQLE 60

Query: 185 YQQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243
             Q L  +  + PE     G Y +    ++      +LL      +     +  ++A  +
Sbjct: 61  NLQWLGMDWDESPENPGEYGPYRQSERGDIYQPLIDQLL-ASNRAYKCYCTEEELEAERE 119

Query: 244 IIRDDLKALNIQHDIFISEDDFHRGD-PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             R               E   + G   +   +       QG          ++   +  
Sbjct: 120 GQRAR------------GEMPHYAGKCANLTPEEQAEKEAQGLKPVIRFRVSRNTEYKFH 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           DM + +++F S  VG D    + K DG  TY   + A     +     +++   G DH  
Sbjct: 168 DMVKGEIVFESDNVGGDF--VIQKRDGMPTY---NFAVAVDDHHMKITHVLR--GDDHIA 220

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419
              +   +  A   +  +       +  +       K+SKR    +       E+G 
Sbjct: 221 NTPKQLMIYEAFGWQAPEFGH----MTLIINSETGKKLSKRDESILQFIEQYRELGY 273


>gi|300715833|ref|YP_003740636.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061669|emb|CAX58785.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 860

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEEIESHVQQHWDEKQTFKVTEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|294142171|ref|YP_003558149.1| leucyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328640|dbj|BAJ03371.1| leucyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 864

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 8   PSEIEAKVQKHWQDEKTFEVTEDENKEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQ 67

Query: 155 AFSGYEV 161
              G  V
Sbjct: 68  RLQGKNV 74


>gi|290475178|ref|YP_003468064.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174497|emb|CBJ81291.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 821

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 91/284 (32%), Gaps = 29/284 (10%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS----ANPTGPMHVGHCRCAVV 146
           + ++ +Y  + +     S     +  +        +F S      P+G +H+GH R   +
Sbjct: 3   MKINKTYSARDVEKEAQSYWSSAKTFLADEHNPGEKFYSLCMFPYPSGNIHMGHVRNYSI 62

Query: 147 GDTL--------ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198
           GD +         ++    G++       N   A I        W Y+  + N    L +
Sbjct: 63  GDAIIRYQKMCGKNVFQPMGWDAFGLPAEN---AAIKNNTHPASWTYKN-INNMRKQLKQ 118

Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
             Y   + + +     D Y  E   F    EK L   K  SV     +    L    + +
Sbjct: 119 MGYGYDWSREIATCSPDYYRWEQWLFLRLYEKGLA-YKKKSVVNWDPVDETVLANEQVIN 177

Query: 257 ------DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310
                 D  + + +  +          + L    ++ E  +     +          Q+ 
Sbjct: 178 GRGWRSDALVEKREISQWFLKITDYAEELLDGLNHLEEWPVQVKTMQKNWIGKSTGVQVS 237

Query: 311 FRSTMVGDDVDRPLLKSDG----SYTYFAADLAYFKCKYERGFD 350
           F+    G+ V+    + D     S+   A D ++ +   ER  D
Sbjct: 238 FKIKGTGNTVEVFTSRPDTIFGCSFIALAPDHSFARELSEREPD 281


>gi|254440081|ref|ZP_05053575.1| valyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198255527|gb|EDY79841.1| valyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 1054

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV  +     + L  LV   RD    KMSK  G+ I    ++DE G+D++
Sbjct: 665 WVARMMMMQLAVVNQVPFKTIYLHGLV---RDAKGKKMSKSTGNVIDPLDIIDEYGADAL 721

Query: 423 RF 424
           RF
Sbjct: 722 RF 723


>gi|123969424|ref|YP_001010282.1| valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199534|gb|ABM71175.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 918

 Score = 39.5 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 61/221 (27%), Gaps = 33/221 (14%)

Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171
           +  N    G    +     N TG +H+GH     + D +       G  V         G
Sbjct: 32  FSPNPEDDGEPFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLGKNVLCLP-----G 86

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
               ++A+      Q       S+             +G+   D++     N+ E+    
Sbjct: 87  TDHASIAVQTILEKQLKSEGKTSE------------DIGR---DEFLKRAWNWKEQSGGR 131

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
           IV               LK +    D         +     + +  + L ++  +Y G  
Sbjct: 132 IVSQ-------------LKRIGYSVDWTRERFTLDQKLNEAVIEAFNILYKKNLIYRGEY 178

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
                  +Q    D +  +            PL+   G + 
Sbjct: 179 LVNWCPESQSAVSDLEVEMQEVNGHLWHFKYPLISESGEHL 219



 Score = 37.6 bits (86), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    +      +V +  LV   RD    KMSK +G+
Sbjct: 507 TGFD-IIFFW-------VARMTMMGNTFTNNIPFNDVYIHGLV---RDENNKKMSKSSGN 555

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451
            I    ++D+ GSD++RF ++        D      +++   + V
Sbjct: 556 GIDPILLIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTV 600


>gi|332828251|gb|EGK00963.1| glutamyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 503

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 95/288 (32%), Gaps = 26/288 (9%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            KV + F + +PTGP+H+G  R A+     A      G  V R   I D  +Q       
Sbjct: 3   QKVRVRF-APSPTGPLHIGGVRTALYNYLFAK--KHGGDFVLR---IEDTDSQ--RFVPG 54

Query: 181 VFWRYQQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
                 +AL        EG +  G Y  +   +  + Y   +    ++    I  D   +
Sbjct: 55  AEEYIIEALTWLGLKFDEGTHVGGAYAPYRQSDRKEVYRKYVDVLLDKGAAYIAFDTPEE 114

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
             +K      +A         S     R   +   + +  L   G  Y        ++  
Sbjct: 115 LELK------RAAVANFQYDASTRGEMRNSLTLSSEEVQALIDGGNQYVVRFKIEANQEV 168

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
              D+ R ++ + S+++    D+ L KS D   TY    LA     +     ++I   G 
Sbjct: 169 LVNDIIRGEVKYNSSVLD---DKVLFKSADNLPTYH---LANIVDDHLMEITHVIR--GE 220

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           +          +  A   +          L+         K+SKR GD
Sbjct: 221 EWLPSAPLHVLLYKAFGWEATMPQFAHLPLLLKPEG--NGKLSKRDGD 266


>gi|317055676|ref|YP_004104143.1| valyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447945|gb|ADU21509.1| valyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 897

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 48/186 (25%), Gaps = 34/186 (18%)

Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163
           +   +G   G     K    +I     N TG +H+GH     + D L       GY    
Sbjct: 20  AWEEAGCFRGVADP-KKKPYSIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALW 78

Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223
               + A   I T A  V    Q+ +   D                     +K+      
Sbjct: 79  IPGTDHA--AIATEAKIVEAMRQEGITKAD-------LGRDKFMERAWAWKEKFGGR--- 126

Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283
                                I + L+ L    D               + ++   L  +
Sbjct: 127 ---------------------IVEQLRTLGTSCDWEREHFTMDDQCSKAVLEVFVKLYEE 165

Query: 284 GYVYEG 289
           G +Y G
Sbjct: 166 GLIYRG 171


>gi|124516135|gb|EAY57643.1| Leucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 828

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                    ++   K T   +E     P+G +H+GH R   +GD LA      G+ V
Sbjct: 18  WKQENAFALKDQPSKKTFYCLEMF-PYPSGRIHMGHVRNYSIGDALARYKRMRGFNV 73


>gi|89074967|ref|ZP_01161412.1| leucyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89049206|gb|EAR54770.1| leucyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 857

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQDIEQKVQEHWDNKKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEVT 162
              G  V 
Sbjct: 67  RLQGKNVM 74


>gi|256369373|ref|YP_003106881.1| valyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|294852301|ref|ZP_06792974.1| valyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|255999533|gb|ACU47932.1| valyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|294820890|gb|EFG37889.1| valyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 910

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|311741540|ref|ZP_07715364.1| isoleucine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311303710|gb|EFQ79789.1| isoleucine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 1056

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+   + A++ A+ ++ A   V+   +V L  DG  +KMSK  G++  +  V D  GSD
Sbjct: 592 RGWFYVMHALSTALFDRPAYKKVVAHGIV-LGNDG--LKMSKSKGNYPNVNEVFDRDGSD 648

Query: 421 SVRFMMLW 428
           ++R+ ++ 
Sbjct: 649 AMRWFLMS 656


>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 482

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 15/116 (12%)

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK-----ENPVF 452
            KMSK   +F  ++ ++++   D++R+ +L       LDF   +++E +K        + 
Sbjct: 267 EKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIE 326

Query: 453 YVQY-------AYARCRSIFRQAKDIFPDLDF---DLFPRNVIPQESEFDTSELQL 498
            + Y       A    + +  +AK+   + +    D F   +          E+ +
Sbjct: 327 NLLYLEKCEPGACDEAQRLLEKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINI 382


>gi|197105227|ref|YP_002130604.1| glutamyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690148|sp|B4RBX8|SYE_PHEZH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|196478647|gb|ACG78175.1| glutamyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 468

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L  P+   T   D  + ++ F++  +    D  LL++DG+ TY   +LA     ++ G  
Sbjct: 143 LKAPQEGETVIQDAVKGEVRFQNKQLD---DLILLRTDGTPTY---NLAVVVDDHDMGVT 196

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           ++I   G DH     R   +   +  +     V +   + L       K+SKR G
Sbjct: 197 HVIR--GDDHLNNAARQTLIYQGLGWE-----VPVWAHLPLIHGPDGAKLSKRHG 244


>gi|167957395|ref|ZP_02544469.1| glutamyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 482

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 106/310 (34%), Gaps = 50/310 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQI-NTLALSV 181
           + +PTG +HVG  R A+    LA       ++     +  R  ++  A  +I  TL+   
Sbjct: 9   APSPTGYIHVGSLRAALFPWLLARQNNGKFILRIE--DTDRSRFVEGAEEKIYETLSWLG 66

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSV 238
               +    N       G Y     + +  E A K   + L + +    + +   +D + 
Sbjct: 67  IDWDEGPTANGKEKGKFGPYHQTERREIYLEWAKKLIDKGLAYADPYTPEQVQAFRDEAK 126

Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298
                 +  + +  N                  P+R  +  + R  Y ++  +    S  
Sbjct: 127 TKKEAFLYRNYRPKNPPKW----------DGTQPLRFKVPEIKR--YTWQDPIMGELSAG 174

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
            +  D                 D  L+KSDG  TY   + A+    +E G  ++I   G+
Sbjct: 175 PEALD-----------------DFILIKSDGLPTY---NFAHIVDDFEMGITHVIR--GA 212

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           ++     R  ++  A+  K     VL C    +   G   K+ KR G      +  + + 
Sbjct: 213 EYIASTPRYLSLYDALEIKPP---VLACSPHIMAPSGNK-KLGKRDGAKSADEYRKEGIL 268

Query: 419 SDSVRFMMLW 428
            +++   +  
Sbjct: 269 PEAMMSFLAS 278


>gi|163843215|ref|YP_001627619.1| valyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673938|gb|ABY38049.1| valyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 910

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|163848242|ref|YP_001636286.1| isoleucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526152|ref|YP_002570623.1| isoleucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669531|gb|ABY35897.1| isoleucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450031|gb|ACM54297.1| isoleucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 1066

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 12/110 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + ++ A  NV+    + L  +G  +KMSK  G+ I    V++  
Sbjct: 569 DQTRGWFYTLHAISTLLFDRPAFKNVICLGHI-LDENG--LKMSKSKGNVIEPEEVINAY 625

Query: 418 GSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           G D++R ++           F    V E  ++          F+V YA  
Sbjct: 626 GVDALRWYLFTAAPPGNARRFSMALVSESMRKFLLTLWNTYAFFVTYANL 675


>gi|28210096|ref|NP_781040.1| leucyl-tRNA synthetase [Clostridium tetani E88]
 gi|28202532|gb|AAO34977.1| leucyl-tRNA synthetase [Clostridium tetani E88]
          Length = 828

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%)

Query: 333 YFAADLAYFKCKY-ERGFD-NMI--------YVMGSDHS----GYVKRLEAVAAAVSEK- 377
           YF     Y   K  E+ FD  +I        YV G +H+     Y +        +    
Sbjct: 511 YFLR---YADNKNSEKAFDPKIINEILPVDKYVGGPEHACMHLLYARFFTKALRDMGYLN 567

Query: 378 -KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELL 435
                + L  + + L  DG  +KMSK  G+ I+    +DE GSD  R ++M     +E  
Sbjct: 568 FDEPFSSLTHQGLILGPDG--LKMSKSKGNTISPDDYIDEFGSDVFRMYLMFGFDYTEGG 625

Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495
            +    +K  S+   V  V+   A CR       D    +D +    N +   S    +E
Sbjct: 626 AWSDEGIKSVSRF--VDRVERTLASCRYYINNPSDDKITIDNNEKDLNFVRHNSIKSITE 683


>gi|29346216|ref|NP_809719.1| isoleucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81445223|sp|Q8A9K9|SYI_BACTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29338111|gb|AAO75913.1| isoleucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 1162

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V +  +   V+   LV    D    KMSKR  + +     ++
Sbjct: 670 GVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLV---LDKNGNKMSKRLNNAVDPFTTIE 726

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYA 457
           + GSD +R+ M+   +  + L FD   ++E  ++          F+  YA
Sbjct: 727 KYGSDPLRWYMITNSSPWDNLKFDIDGIEEVRRKFFGTLYNTYSFFALYA 776


>gi|328951485|ref|YP_004368820.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451809|gb|AEB12710.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 875

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +     +             G+   V + F    P+G +H+GH +   +GD LA  
Sbjct: 5   NPHAIEPKWQAYWQEKGLMKAKEEGEKQYVLMMF--PYPSGDLHMGHLKNYTMGDVLARF 62

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 63  KKQQGYTV 70


>gi|310644226|ref|YP_003948985.1| translation initiation factor if-1 [Paenibacillus polymyxa SC2]
 gi|309249177|gb|ADO58744.1| Translation initiation factor IF-1 [Paenibacillus polymyxa SC2]
          Length = 467

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 103/370 (27%), Gaps = 88/370 (23%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V D + S + + GY+V    Y+                            
Sbjct: 37  IHIGNARPVIVFDVVRSYLEYLGYDV---NYV---------------------------- 65

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI- 254
                   V    V  +L  K     +  P             +  +    +DL  LN+ 
Sbjct: 66  --------VNFTDVDDKLIRKARELNMEVPAVA----------EKFIAAYHEDLAGLNVP 107

Query: 255 --QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312
               +  ++E          I D I +L  +GY YE            K           
Sbjct: 108 AASINPRVTES------MDLIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLE 161

Query: 313 STMVGDDV----------DRPLLKS-------------DGSYTYFAADLAYFKCKYERGF 349
               G  +          D  L K+             DG   +     A  +       
Sbjct: 162 ELQFGIRINVDERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTL 221

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
           D    + G          E   A       +       +   Y      KMSK  G+ I 
Sbjct: 222 D----IHGGGQDLQFPHHECECAQSEVITGKPLSRYW-MHNGYIRIDNEKMSKSLGNGIL 276

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           ++ +      +++R+ ML       L+++   + +   EN V  +  A A  +     A 
Sbjct: 277 VKDLRARHKPEALRYFMLSTHYRNPLNYNQETMSQA--ENSVERIANAVANVKHRLAIAL 334

Query: 470 DIFPDLDFDL 479
               ++  +L
Sbjct: 335 KGNEEVSAEL 344


>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 457

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 80/262 (30%), Gaps = 41/262 (15%)

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP------ 294
            +  + DD  AL ++          +      + ++I  L + G  Y+            
Sbjct: 92  FIAFMNDDAAALGVEKPDHEPRATEY---VPQMLELIGRLEKNGLAYQVPDGDVNFSVRK 148

Query: 295 -----KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK-------------SDGSYTYFAA 336
                K       D+   + +       D +D  L K              DG   +   
Sbjct: 149 FPGYGKLSGKALDDLRAGERVDVDGTKEDPLDFVLWKHAREGEPSWPSPWGDGRPGWHIE 208

Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396
             A         FD    + G          E   A  SE   Q   +   +   +    
Sbjct: 209 CSAMSSVLLGEHFD----IHGGGQDLQFPHHENEIAQ-SEGAHQCRFVNYWMHNGFVRVD 263

Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456
             KMSK  G+F T++ ++ +   + +RF +L       L++    + +  +         
Sbjct: 264 DEKMSKSLGNFCTIKEILRKYDPEVLRFFILRAHYRSPLNYSDTHLDDARQ--------- 314

Query: 457 AYARCRSIFRQAKDIFPDLDFD 478
           A +R  +  R A    P +D+D
Sbjct: 315 ALSRLYTALRTANTDPPSIDWD 336


>gi|255325333|ref|ZP_05366439.1| isoleucine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297898|gb|EET77209.1| isoleucine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 1056

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
            G+   + A++ A+ ++ A   V+   +V L  DG  +KMSK  G++  +  V D  GSD
Sbjct: 592 RGWFYVMHALSTALFDRPAYKKVVAHGIV-LGNDG--LKMSKSKGNYPNVNEVFDRDGSD 648

Query: 421 SVRFMMLW 428
           ++R+ ++ 
Sbjct: 649 AMRWFLMS 656


>gi|254719043|ref|ZP_05180854.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984035|ref|ZP_06096770.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306840069|ref|ZP_07472855.1| valyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662627|gb|EEZ32888.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306404797|gb|EFM61090.1| valyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 910

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|170289858|ref|YP_001736674.1| leucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173938|gb|ACB06991.1| leucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 953

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 66/237 (27%), Gaps = 32/237 (13%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           + +           +  +      K  +      P  P H+GH R   + D  A      
Sbjct: 13  IERKWQERWEKSRIFEADPDKSLKKFYLTVAYPYPNSPQHIGHGRTYGLTDAYARFKRMQ 72

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           GY V     ++    G  I  +A  +     + +   DS L     P   +K +   L  
Sbjct: 73  GYNVLFPMAFHY--TGTPILAMAKRLREGDPEII---DSFLRIYGIPEEKIKELEDPLK- 126

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
                                  +   + I+  +K +    D               I  
Sbjct: 127 ---------------------MARYFHEEIKAGMKLMGYSIDWRREFTTIDPAYNKFITW 165

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
               L  +GY+ +G  P        +CD    Q   R  +  +  +  L+K +G   
Sbjct: 166 QFMKLQERGYLTKGKHPV---GWCPRCDNAVGQHDTRGDVEPEITEVTLIKFEGDSL 219


>gi|54310010|ref|YP_131030.1| leucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|60390708|sp|Q6LN98|SYL_PHOPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46914449|emb|CAG21228.1| putative leucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 858

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +     +   +  N      K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQDIEQKVQEHWDNNKTFVVNEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQ 66

Query: 155 AFSGYEVT 162
              G  V 
Sbjct: 67  RLQGKNVM 74


>gi|109899226|ref|YP_662481.1| glutamyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064367|sp|Q15RR1|SYE_PSEA6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|109701507|gb|ABG41427.1| glutamyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 469

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 87/282 (30%), Gaps = 48/282 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A      G +      I D    I            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLYA---KSQGGKFVLR--IED--TDIERSTQEAIDAILEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +        +G Y             D+Y + +    EE        +   A +  IR+ 
Sbjct: 61  MEWLGLTWDDGPYYQTKRF-------DRYKALINEMLEEGKAYKC--FMSSAELDEIREK 111

Query: 249 LKALNIQHDI---FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
            KA   +      +    D   G+P  IR                  P + K   K  + 
Sbjct: 112 QKANGEKPRYPGTWRDRTDHPEGEPFVIR---------------FKNPLEGKVLVKDHIR 156

Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365
               +  S +     D  +L+SDG+ TY   +       ++ G  ++  V G DH     
Sbjct: 157 GNIEIANSELD----DLIILRSDGTPTY---NFCVVVDDWDMGITHV--VRGEDHINNTP 207

Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
           R   +  A+     +        V +       K+SKR G  
Sbjct: 208 RQINILQALGAPVPE-----YAHVSMILGDDGKKLSKRHGAV 244


>gi|307353953|ref|YP_003895004.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157186|gb|ADN36566.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 922

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420
               +     A    E + +  V+    +         KMS   G+ I L   V+EVG+D
Sbjct: 570 HLTFQLFHHKALFPKELQPRGMVVFGMGL-----LEGAKMSSSKGNVILLEDAVEEVGAD 624

Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQS 446
           +VR M L        DFD+ +    S
Sbjct: 625 TVR-MFLVGSAEPWQDFDWRRELVSS 649



 Score = 37.2 bits (85), Expect = 8.8,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 7/131 (5%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           +R+       +         G+  K  +      P+G MHVGH R  +V D +A      
Sbjct: 1   MREYEKEYRDAWSHIFEADPGEADKFYVNVAYPYPSGAMHVGHGRTYIVPDVIARYYRMR 60

Query: 158 GYEVT--REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPG-VYLKHVGKE 212
           G  V     +++   G  +  ++  +    ++   LY +   +PE      V    + + 
Sbjct: 61  GKHVLFPMAFHV--TGTPVIGISRRIANGDEKTIKLYRDLYRVPEDVLEKFVDPDEIVRY 118

Query: 213 LADKYSSELLN 223
            + +Y   + N
Sbjct: 119 FSSEYERIMRN 129


>gi|306843842|ref|ZP_07476439.1| valyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275843|gb|EFM57563.1| valyl-tRNA synthetase [Brucella sp. BO1]
          Length = 910

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|298675809|ref|YP_003727559.1| leucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288797|gb|ADI74763.1| leucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 964

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 17/59 (28%)

Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                   +          K  I        G +H GH R   +GD +A      GY V
Sbjct: 14  WQKRWDEEKIFEADPDNREKFLITVPYPYLNGNLHAGHTRTFTIGDAVARHKRMKGYNV 72


>gi|295396830|ref|ZP_06806962.1| glutamate--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974952|gb|EFG50647.1| glutamate--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 503

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 105/309 (33%), Gaps = 33/309 (10%)

Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173
           +  I    KV + + + +PTG +H+G+ R A+     A     +G E        D    
Sbjct: 8   KGEINMSDKVRVRY-APSPTGHLHIGNARTALFNYLFAR---HNGGEFIIRIEDTDTKRN 63

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW-LPI 232
           +     S     Q      D    +    G Y +   K++ D+Y +ELL+     +    
Sbjct: 64  LEDGERSQLENLQWLGIEWDEGPDKPGEYGPYRQSERKDIYDRYLTELLDKGLAYYAFDT 123

Query: 233 VKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291
            ++   +   ++   +  + +    D    E              ID    +G       
Sbjct: 124 SEEIEAEHEAQVANGETPRYIGKWRDKSQEE--------------IDAARAEGRPETIRF 169

Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351
             P++ T    DM + ++ F S  +  D    + K DG  TY  A +       +     
Sbjct: 170 RVPENTTYTFDDMVKGEISFESAAISGDF--VIRKQDGMPTYNFAVV------VDDHLME 221

Query: 352 MIYVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           + +V+ G DH     +   +  A+  ++         +  +       K+SKR G  +  
Sbjct: 222 ITHVLRGDDHIANTPKQLMIYDALGFERPTFGH----MTLIVNAETGKKLSKRDGSILQF 277

Query: 411 RHVVDEVGS 419
                ++G 
Sbjct: 278 IEQYRDLGY 286


>gi|262274495|ref|ZP_06052306.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221058|gb|EEY72372.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 678

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + + +  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFGDMLKAWTKSGALQEEMANKMNEWFESGLQQWDISRDAPYFGFEIPGEPGKYFYV 253

Query: 303 DMD------RKQLLFRSTMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIY 354
            +D           F +     D D    K SD   Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNFCNKNGNVDFDEYWKKDSDAELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGAGFRKPT-NVFVHGYVTV----NGAKMSKSKGTFIKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
             +  + +R+    + N+ + D D        + N
Sbjct: 348 KHLDPECLRYYYAAKLNNRIDDLDLNLEDFVQRVN 382


>gi|209695662|ref|YP_002263591.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710892|sp|B6EIY5|SYM_ALISL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|208009614|emb|CAQ79910.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 686

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 115/364 (31%), Gaps = 62/364 (17%)

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQ----------ALYNNDSD--LPEGYYP 202
            F+G++++ + Y +    +   LA S++   ++           L++ + +  LP+ +  
Sbjct: 84  DFAGFDISFDNYHSTHSDENRELASSIYLELKKNGFITSRTISQLFDPEKEMFLPDRFVK 143

Query: 203 GVYLKHVGKELADKYSSELLNFPE--------------EKWLPIVKDYSVQAMMKIIRDD 248
           G   K   +E   +Y     N  E                  P++KD            D
Sbjct: 144 GTCPKCKSEE---QYGDNCDNCGETYSPTDLINPKSAVSGATPVMKDSEHFFF------D 194

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKCD 303
           L         +           + +++  ++  +Q  +     Y G   P ++       
Sbjct: 195 LPQFESMLKEWTRSGSLQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGETNKFFYVW 254

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           +D       S     D    L   +        +L +F  K      +++Y     HS +
Sbjct: 255 LDAPIGYMGSFKNLCDKRDDLDFDEYWKLNSTTELYHFIGK------DIVYF----HSLF 304

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
                A+      +K   NV +   V +       KMSK  G FI     ++ +  + +R
Sbjct: 305 ---WPAMLDGAGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFIKAGTYLNHLDPECLR 356

Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
           +    + NS + D D        + N     +          R A  I    D  L    
Sbjct: 357 YYYAAKLNSRIDDIDLNLEDFTQRVNSDVVNK----IVNLASRNAGFITKRFDGKLSDNF 412

Query: 484 VIPQ 487
           V P+
Sbjct: 413 VAPE 416


>gi|118602577|ref|YP_903792.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|187647764|sp|A1AWL4|SYM_RUTMC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118567516|gb|ABL02321.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 550

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 38/214 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL     Q   +I E        + + +  +   +Q  +     Y G   P         
Sbjct: 192 DLPQFETQLKAWIKEGHLQDEVSNKLSEWFEQGLQQWDISRDAPYFGFQIPDVEGKYFYV 251

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G D D    K   +  Y +   D+ YF              
Sbjct: 252 WLDAPIGYMASFKKLCDEQGLDFDEYFNKDSNTELYHFIGKDIVYF-------------- 297

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               H+ +     A+    + +      +      L  +G   KMSK  G FI  R  ++
Sbjct: 298 ----HALF---WPAILMGSNYRTPSAIFVHGF---LTVNGQ--KMSKSRGTFIQARTYLN 345

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +  + +R+   ++ ++++ D D      + + N
Sbjct: 346 HLNPECLRYYYAYKLSAKIDDIDLNLTDFKQRVN 379


>gi|55980407|ref|YP_143704.1| glutamyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296638|sp|P27000|SYE_THET8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|28948411|pdb|1J09|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna
           Synthetase Complexed With Atp And Glu
 gi|28948740|pdb|1N75|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna
           Synthetase Complexed With Atp.
 gi|28948742|pdb|1N77|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna
           Synthetase Complexed With Trna(Glu) And Atp.
 gi|28948743|pdb|1N77|B Chain B, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna
           Synthetase Complexed With Trna(Glu) And Atp.
 gi|28948746|pdb|1N78|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna
           Synthetase Complexed With Trna(Glu) And Glutamol-Amp.
 gi|28948747|pdb|1N78|B Chain B, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna
           Synthetase Complexed With Trna(Glu) And Glutamol-Amp.
 gi|114793637|pdb|2CUZ|A Chain A, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With L-Glutamate
 gi|114793638|pdb|2CV0|A Chain A, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With Trna(Glu) And L-Glutamate
 gi|114793639|pdb|2CV0|B Chain B, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With Trna(Glu) And L-Glutamate
 gi|114793642|pdb|2CV1|A Chain A, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With Trna(Glu), Atp, And An Analog Of
           L-Glutamate: A Quaternary Complex
 gi|114793643|pdb|2CV1|B Chain B, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With Trna(Glu), Atp, And An Analog Of
           L-Glutamate: A Quaternary Complex
 gi|114793646|pdb|2CV2|A Chain A, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With Trna(Glu) And An Enzyme Inhibitor, Glu-Ams
 gi|114793647|pdb|2CV2|B Chain B, Glutamyl-Trna Synthetase From Thermus Thermophilus In
           Complex With Trna(Glu) And An Enzyme Inhibitor, Glu-Ams
 gi|118137631|pdb|2DXI|A Chain A, 2.2 A Crystal Structure Of Glutamyl-Trna Synthetase From
           Thermus Thermophilus Complexed With Trna(Glu), Atp, And
           L- Glutamol
 gi|118137632|pdb|2DXI|B Chain B, 2.2 A Crystal Structure Of Glutamyl-Trna Synthetase From
           Thermus Thermophilus Complexed With Trna(Glu), Atp, And
           L- Glutamol
 gi|55771820|dbj|BAD70261.1| glutamyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 468

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 96/284 (33%), Gaps = 38/284 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +  ++ +PTG  HVG    A+     A     +G          D    +      + 
Sbjct: 1   MVVTRIAPSPTGDPHVGTAYIALFNYAWAR---RNGGRFIVRIEDTDRARYVPGAEERIL 57

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
              +    + D     G   G Y +     L  KY+ ELL     K     + +     +
Sbjct: 58  AALKWLGLSYDEGPDVGGPHGPYRQSERLPLYQKYAEELL-----KRGWAYRAFETPEEL 112

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILPPPKSKTTQK 301
           + IR               E   + G    I  +  +  AR+G  +   L  P+  TT+ 
Sbjct: 113 EQIRK--------------EKGGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEV 158

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            D  R  +++ +  +    D  LLKSDG  TY  A++       +     +  V+ ++  
Sbjct: 159 KDELRGVVVYDNQEIP---DVVLLKSDGYPTYHLANV------VDDHLMGVTDVIRAEEW 209

Query: 362 GYVKRLEAVA-AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                +  +   A   +  +   +      L R+    K+SKR 
Sbjct: 210 LVSTPIHVLLYRAFGWEAPRFYHM-----PLLRNPDKTKISKRK 248


>gi|327393109|dbj|BAK10531.1| leucyl-tRNA synthetase LeuS [Pantoea ananatis AJ13355]
          Length = 860

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESRVQQQWDENETFKVTEQEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|309389593|gb|ADO77473.1| leucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 831

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K L +   S +        K     +E     P+G +H+GH R   +GD +A      G
Sbjct: 12  NKWLKNWEDSNLHKTGADPAKENYYVLEMF-PYPSGNLHMGHVRVYSIGDVIARYKRMKG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|306840459|ref|ZP_07473218.1| valyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289474|gb|EFM60692.1| valyl-tRNA synthetase [Brucella sp. BO2]
          Length = 910

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|296533435|ref|ZP_06896019.1| leucine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296266241|gb|EFH12282.1| leucine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 860

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK---VNIEFVSANPTGPMHVGHCRCAVVGD 148
               +           +G  +    +  G+K     +E     P+G +H+GH R   +GD
Sbjct: 9   RYDFASAEPRWQREWEAGACFAAPDVPDGSKPKYYVLEMF-PYPSGKIHMGHVRNYTLGD 67

Query: 149 TLASLMAFSGYEV 161
            +A      G++V
Sbjct: 68  VVARYKRARGFQV 80


>gi|254525794|ref|ZP_05137846.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537218|gb|EEE39671.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 915

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 62/230 (26%), Gaps = 22/230 (9%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K       S   +  N    G    +     N TG +H+GH     + D +       G
Sbjct: 16  EKKWQENWESLRAFSPNPEDDGEPFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLG 75

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
             V         G    ++A+       +    N+    E      +LK           
Sbjct: 76  KNVLCLP-----GTDHASIAVQTIL---EKQLKNEGKTSEDIGRNEFLKRAWNWKEQSGG 127

Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-------- 270
             +       +             K+    ++A NI H   +     +RG+         
Sbjct: 128 RIVSQLKRIGYSVDWTRERFTLDQKLNEAVIEAFNILHKKNL----IYRGEYLVNWCPES 183

Query: 271 -SPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318
            S + D+   +    G+++    P       Q             T++GD
Sbjct: 184 QSAVSDLEVEMQEVNGHLWHFKYPLISESGEQLDKYLEVATTRPETLLGD 233



 Score = 38.0 bits (87), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    +      +V +  LV   RD    KMSK +G+
Sbjct: 504 TGFD-IIFFW-------VARMTMMGNTFTNNIPFKDVYIHGLV---RDENNKKMSKSSGN 552

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV-----FYVQYAYARC 461
            I    ++D+ GSD++RF ++        D      +++   + V     F  +   A  
Sbjct: 553 GIDPILLIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATK 612

Query: 462 RSIFRQAKDIFPDLD------FDLFPRNVIPQESEFDTSELQLIVH 501
             +  +  +    L+       +L  + ++ + ++ +     L+  
Sbjct: 613 FVLINKTSNNNDSLNESDENSLELCDKWILSKLNQINIKVAALLKE 658


>gi|71065144|ref|YP_263871.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123761787|sp|Q4FU71|SYL_PSYA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71038129|gb|AAZ18437.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 921

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 21/64 (32%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
               +           N         +  +   P+G +H+GH R   + D L+      G
Sbjct: 49  AAQQAKWATDKRFEVSNEPSDKPSRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKG 108

Query: 159 YEVT 162
           YEV 
Sbjct: 109 YEVM 112


>gi|312130827|ref|YP_003998167.1| isoleucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907373|gb|ADQ17814.1| Isoleucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 1147

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 12/117 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+ I     + 
Sbjct: 648 GVDQTRGWFFTLHAIAGMLFDSVAFKNVVSTGLV---LDKNGNKMSKRLGNGIDPFDTLA 704

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSI 464
           + G+D  R+ M+      + L F+   V+E  ++          F+  YA     +I
Sbjct: 705 KYGADPTRWYMITNAEPWDNLRFNLDGVQEVQRKLFGTLTNTYNFFALYANLDNYTI 761


>gi|291616683|ref|YP_003519425.1| LeuS [Pantoea ananatis LMG 20103]
 gi|291151713|gb|ADD76297.1| LeuS [Pantoea ananatis LMG 20103]
          Length = 860

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESRVQQQWDENETFKVTEQEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|269125944|ref|YP_003299314.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermomonospora curvata DSM 43183]
 gi|268310902|gb|ACY97276.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermomonospora curvata DSM 43183]
          Length = 846

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ IT   ++ E GSD+VR+     +      F+  ++K          
Sbjct: 574 DPDRKKMSKSKGNVITPMGLLVEHGSDAVRYWAASARPGTDTAFEVKQIKVGR------- 626

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                       R A  I     F L    V P  +  +  +L     LA    V+  AT
Sbjct: 627 ------------RLATKILNASRFVLGLGEVAPDAAITEPVDLS---MLAALREVVAEAT 671

Query: 514 IAQ 516
            A 
Sbjct: 672 EAF 674


>gi|18312411|ref|NP_559078.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|60390730|sp|Q8ZXT6|SYL_PYRAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|18159866|gb|AAL63260.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 945

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 3/68 (4%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           L++    + +   +       Y         K  +      P G +H+GH R  ++ D L
Sbjct: 7   LFIK---MAEKWQAKWAEARVYEPEPRPGAAKFFVTAAYPYPNGAIHIGHGRTYLIADVL 63

Query: 151 ASLMAFSG 158
           A      G
Sbjct: 64  ARFHRHMG 71


>gi|313123059|ref|YP_004033318.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279622|gb|ADQ60341.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 660

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 100/335 (29%), Gaps = 50/335 (14%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G + +G+    V  DT+       GY+                          +    
Sbjct: 17  PSGRLTIGNAYTTVAADTMTRYKKARGYDT------------FFLTGTDEHGLKIEQKAE 64

Query: 192 NDSDLPEGYYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-VQAMMKIIRDD 248
                P+ Y  G    +K + K+L   Y   +    EE    + K +  ++A   I   +
Sbjct: 65  KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 249 LKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
                 ++ + + +E            +++  +A  G+  + +  P       K      
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF------DNMIYVM-GS-- 358
           Q             R     +        DL+  +   + G        +++YV   +  
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 359 -----------DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----------- 396
                      D + + K   A    V ++  + + +   ++ +  D             
Sbjct: 245 NYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 397 ---PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
                KMSK  G+ +    ++   G D VR+ ++ 
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMR 339


>gi|260887853|ref|ZP_05899116.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838721|ref|YP_004413301.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862359|gb|EEX76859.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746485|gb|AEB99841.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 824

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K         +        +     +E     P+G +H+GH R   +GD +A      G 
Sbjct: 12  KWQEKWQKDDVYKTEIDRTQPEYYVLEMF-PYPSGNLHMGHVRNYSIGDVIARFKKMQGC 70

Query: 160 EV 161
            V
Sbjct: 71  NV 72


>gi|254706849|ref|ZP_05168677.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710043|ref|ZP_05171854.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031538|ref|ZP_05445152.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159673|ref|ZP_05457426.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254941|ref|ZP_05460477.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222125|ref|ZP_05936406.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314312|ref|ZP_05953509.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317591|ref|ZP_05956788.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|265988625|ref|ZP_06101182.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998090|ref|ZP_06110647.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920709|gb|EEX87362.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261296814|gb|EEY00311.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303338|gb|EEY06835.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|262552558|gb|EEZ08548.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660822|gb|EEZ31083.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 910

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|241895883|ref|ZP_04783179.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870926|gb|EER74677.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 804

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +Y+ G++H+     Y +    V   +     +          +       KMSK  G+ +
Sbjct: 527 LYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQRLANQGMILGENHEKMSKSKGNVV 586

Query: 409 TLRHVVDEVGSDSVR 423
               VV+E G+D++R
Sbjct: 587 NPDDVVEEYGADTLR 601


>gi|187477909|ref|YP_785933.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123725187|sp|Q2L2K5|SYI_BORA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115422495|emb|CAJ49020.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 953

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 71/222 (31%), Gaps = 38/222 (17%)

Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK----QLLFRS-----TM 315
            H      + ++   + + G      L P +    +    ++      + F S     T+
Sbjct: 498 LHPRTVELLEEVAKRVEKSGIEAWQSLDPRELLGDEADSYEKNRDTLDVWFDSGSTHATV 557

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAV 374
           +G   D  L  S G    + ADL               Y+ GSD   G+          +
Sbjct: 558 LG-GKDHALHGSHGEQLAWPADL---------------YLEGSDQHRGWFHSSLLTGCML 601

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
             +     +L    V    DG   KMSK  G+ I  + V D +G++ +R  +     S  
Sbjct: 602 YGQPPYKGLLTHGFVV---DGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGE 658

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476
           L      +K   +          Y R R+  R       D D
Sbjct: 659 LSISDEILKRVVEG---------YRRIRNTLRFLLANVADFD 691


>gi|39997307|ref|NP_953258.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|60390724|sp|Q74AZ0|SYL_GEOSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39984198|gb|AAR35585.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 824

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  +   K       +          K     +E     P+G +H+GH R   +GD + 
Sbjct: 5   YIPKNVEGKWQEIWEENKTFTVTEDPSKPKYYLLEMF-PYPSGRIHMGHVRNYSIGDVVG 63

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 64  RFKRMRGFNV 73


>gi|99081547|ref|YP_613701.1| valyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99037827|gb|ABF64439.1| valyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 1031

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +V R+  +  AV ++     V L  LV   RD    KMSK  G+ I    ++DE G+D++
Sbjct: 639 WVARMMMMQLAVVDQIPFDTVYLHGLV---RDAKGKKMSKSTGNVIDPLEIIDEYGADAL 695

Query: 423 RF 424
           RF
Sbjct: 696 RF 697



 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 72/264 (27%), Gaps = 52/264 (19%)

Query: 93  LSPSYLRKILSSIVVSGIEY------GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146
           L  ++      S +    E       G N     +   I     N TG +H+GH     +
Sbjct: 19  LDKTFNAAEAESRLFDAWEKAGCFTAGANAKPGASTYCIMIPPPNVTGVLHMGHAFNNTL 78

Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            D L       GY+   +   + AG     +                             
Sbjct: 79  QDILIRWKRMQGYDTLWQPGTDHAGIATQMV----------------------------- 109

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF- 265
             V ++LA+           EK+L  V ++  Q+   II   LK L    D   +     
Sbjct: 110 --VERKLAETQQPSRRELGREKFLEKVWEWKEQSGGTIINQ-LKRLGASCDYERTAFTMA 166

Query: 266 ---------HRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
                    H   P     +  +   +  +G +Y G          +    D +      
Sbjct: 167 GAQGDTRTGHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEV 226

Query: 314 TMVGDDVDRPLLKSDGSYTYFAAD 337
                    PL   + +YTY   D
Sbjct: 227 AGHMWHFKYPLAGGE-TYTYIEKD 249


>gi|330834022|ref|YP_004408750.1| glutamyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566161|gb|AEB94266.1| glutamyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 565

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 9/150 (6%)

Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183
            +   + NP GP+H+G+ R A++    A++   +G  + R    +D   +I       + 
Sbjct: 96  VVTRFAPNPDGPIHLGNARAAILSAEYAAMY--NGKFILR---FDDTDPKIKKPLKEAYD 150

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---KYSSELLNFPEEKWLPIVKDYSVQA 240
             ++ L     D  E  +       V  E++    +     ++   ++     ++   + 
Sbjct: 151 WIKEDLKWLGIDW-EKEFKASERMEVYYEVSKIMLEKGYAYVDLGSDEQFKSWRNSKRKG 209

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +   R+     N++    + E  F  G  
Sbjct: 210 EVYPFRETPPETNLELWDKMLEGKFSEGKA 239


>gi|254507772|ref|ZP_05119903.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549297|gb|EED26291.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 686

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPD-NVFVHGYVTV----NGAKMSKSKGTFIKAATYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D +  + +R+    + NS + D D        + N
Sbjct: 348 DHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|116754239|ref|YP_843357.1| isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121692931|sp|A0B7P3|SYI_METTP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116665690|gb|ABK14717.1| Isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 1049

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 357 GSDH-SGYV-KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D   G+   +L A   A      +  ++    +    D    KMSK  G+ +    VV
Sbjct: 556 GHDQTRGWFYSQLGASMVAFGRAPYKSVLMHGFTL----DEQGRKMSKSIGNVVHPEDVV 611

Query: 415 DEVGSDSVRFMMLWRKNS-ELLDFDFC 440
           +  G+D++RF +L      E L F + 
Sbjct: 612 ERYGADTLRFYVLSSNAPWEDLHFSWE 638


>gi|332976331|gb|EGK13187.1| isoleucine--tRNA ligase [Desmospora sp. 8437]
          Length = 931

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 75/222 (33%), Gaps = 19/222 (8%)

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A  + + E G+   +Y+ GSD   G+     + A A         VL         DG  
Sbjct: 544 AVLEQREEAGWPADLYLEGSDQYRGWFNSSLSTAVATKGTAPYRQVLSHGF---TLDGEG 600

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    V+   G+D +R  +        +     K+ +Q  E         
Sbjct: 601 RKMSKSLGNTIDPLQVMKTYGADILRLWVASVDYQADVRVS-EKILKQIAE--------V 651

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           Y + R+ FR           D  P     + S  D  +   +V L      +       E
Sbjct: 652 YRKIRNTFRFLLGNLS----DFQPETDRVEPSRLDELDRYALVKLQRLVEQVVKGFENYE 707

Query: 518 PYKLAFYLYDLASVF-HGHWSHGRENPRLRFVQANNRKLTMM 558
            + +  +++   +VF    +    ++ RL  +   + K    
Sbjct: 708 FHSVYTHIHHFCTVFLSQFYLDVLKD-RLYILPQGDEKRRSS 748


>gi|330445214|ref|ZP_08308866.1| leucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489405|dbj|GAA03363.1| leucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 857

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQDIEQKVQEHWDNKKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEVT 162
              G  V 
Sbjct: 67  RLQGKNVM 74


>gi|325528571|gb|EGD05674.1| leucyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 864

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTQEDANKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|313673045|ref|YP_004051156.1| isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939801|gb|ADR18993.1| Isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 931

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 30/202 (14%)

Query: 343 CKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIK 399
            + E      +Y+ GSD   G+      +  +V  +       VL    V    DG   K
Sbjct: 555 VRDELKPSANMYLEGSDQHRGWFHSS--LLESVGTRGVAPYKEVLTHGFVV---DGKGRK 609

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ +  + ++++ G++ +R  +     +E +      +K   +         +Y 
Sbjct: 610 MSKSLGNVVKPQEIIEKYGAEILRLWVAAEDYTEDVRISEDIIKRLVE---------SYR 660

Query: 460 RCRSIFRQAKDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517
           + R+  R       D   + D    + + +  ++   + QL+         I  A    +
Sbjct: 661 KIRNTARYLLGNLYDFSHNKDYVEFDKLMELDKYILYKWQLVK------DRIYKANQNYQ 714

Query: 518 PYKLAFY--LYDLA-SVFHGHW 536
            +   FY  L +   +     +
Sbjct: 715 FHI--FYHTLINFCINDLSAFY 734


>gi|206602933|gb|EDZ39413.1| Leucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 828

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
                    ++  GK T   +E     P+G +H+GH R   +GD LA      G+ V
Sbjct: 18  WKQENAFALKDQPGKKTFYCLEMF-PYPSGRIHMGHVRNYSIGDALARYKRMRGFNV 73


>gi|183602754|ref|ZP_02964117.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683146|ref|YP_002469529.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241191480|ref|YP_002968874.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196885|ref|YP_002970440.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183217992|gb|EDT88640.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620796|gb|ACL28953.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249872|gb|ACS46812.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251439|gb|ACS48378.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289177605|gb|ADC84851.1| Valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295794472|gb|ADG34007.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 7/179 (3%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G     +   +    +I+      +G +HVGH       D +A     +G
Sbjct: 27  AKWRKVWDEDGTYTFHDPGERKAVYSIDTPPPTVSGHLHVGHVFSYTHTDIIARFKRMNG 86

Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL--PEGYYPGVYLKH-----VGK 211
           YEV      +D G        + +          D D   P     G  ++      + +
Sbjct: 87  YEVLYPMGWDDNGLPTERRVQNYYGVRVDTSLKYDPDFVPPFEGTEGKKIQAKDQVPISR 146

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
           +   +   +L    E+++  + +   +    K     +     +        +  RG+ 
Sbjct: 147 KNFIELCEKLTAQDEKQFEELWRQLGLSIDWKQTYHTIGEYPQRVAQKAFLRNLERGEA 205


>gi|153853341|ref|ZP_01994750.1| hypothetical protein DORLON_00739 [Dorea longicatena DSM 13814]
 gi|149754127|gb|EDM64058.1| hypothetical protein DORLON_00739 [Dorea longicatena DSM 13814]
          Length = 509

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 112/313 (35%), Gaps = 50/313 (15%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E ++         L +
Sbjct: 31  APSPTGRMHVGNLRTALYTYLIAKHEGGDFILRI-----EDTDQERFVE------GALDI 79

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G   G Y++     + +  KY+ +L+   +  +        
Sbjct: 80  IYHTLKETGLVHDEGPDKDGG-VGPYVQSERNAQGIYLKYAKQLIEQGD-AYYCFCDKER 137

Query: 238 VQAMM-KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
           ++++  K+  +D     + +D                ++ ++     G  +      P  
Sbjct: 138 LESLKSKVSDEDGGTEIVVYDKHCLHLS---------KEEVEANLAAGKPHVIRFNMPTE 188

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            TT   D     +   +  +    D  L+KSDG  TY   + A     +  G  ++  V 
Sbjct: 189 GTTTFHDEIYGDITVPNEELD---DLILIKSDGYPTY---NFANVVDDHLMGITHV--VR 240

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           G+++     +   +  A         V +     L  D    K+SKR G   +   ++++
Sbjct: 241 GNEYLSSAPKYNKIYEAFGWD-----VPVYVHCPLITDENHKKLSKRCGHS-SYEDLIEQ 294

Query: 417 --VGSDSVRFMML 427
             V    V ++ L
Sbjct: 295 GFVTEAVVNYVAL 307


>gi|126459216|ref|YP_001055494.1| isoleucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248937|gb|ABO08028.1| Isoleucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 977

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS- 432
           +   KA    +L + + L + G   KMSK  G+ +  + + ++ G+D VR  +L +    
Sbjct: 577 LYTGKAPYKTILIQGLILDKHGQ--KMSKSKGNVVWAKDLFEKYGADPVRLYILSKAAPW 634

Query: 433 ELLDFDFCKVK 443
           E L FD  +VK
Sbjct: 635 EDLAFDPDEVK 645



 Score = 38.4 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 39/135 (28%), Gaps = 9/135 (6%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
             SP  + K ++    S   + +    +G  +           G  HVGH R     D +
Sbjct: 11  TYSPHSVEKEVAEFWNSNGIFHKWRQWRGGPRFTFLEGPPTTNGMPHVGHIRGRTYKDVV 70

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                  GY+V  +        Q   +   V  R  +     D +     Y         
Sbjct: 71  LRFHRLLGYDVWVQ---GGWDMQGMPVEWEVEKR-LKLRSKKDIEK----YGLEKFALAC 122

Query: 211 KELADKYSSELLNFP 225
             L D+Y  +   + 
Sbjct: 123 NALVDEYLEQWKEWG 137


>gi|86150493|ref|ZP_01068718.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839088|gb|EAQ56352.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 917

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESTPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|320450628|ref|YP_004202724.1| isoleucine-tRNA ligase [Thermus scotoductus SA-01]
 gi|320150797|gb|ADW22175.1| isoleucine-tRNA ligase [Thermus scotoductus SA-01]
          Length = 1043

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 30/171 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +   +    A  NV+   L+    D    KMSK  G+ +    ++ 
Sbjct: 551 GIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLI---LDEKGQKMSKSKGNVVDPWDIIR 607

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D++R ++ +         F    V+E  ++          F+V YA          
Sbjct: 608 EFGADALRWYIYISAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYANLD------- 660

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                     DL     + +  E D     L+  L +  + +  A  A +P
Sbjct: 661 --------QPDLKNPPPVEKRPELD---RWLLARLQDLIQRVTEALEAYDP 700


>gi|308189924|ref|YP_003922855.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777133|ref|YP_004136784.1| leucyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624666|gb|ADN68971.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038208|gb|ADV34407.1| Leucyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 780

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R   +GD LA      G+ V
Sbjct: 41  PYPSGNIHMGHVRNYAIGDVLARYYRRKGFNV 72


>gi|87302693|ref|ZP_01085504.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
 gi|87282576|gb|EAQ74534.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 21/60 (35%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                  +  G+         G       +   P+G +H+GH R  V+ D +A +    G
Sbjct: 26  AGWQRHWLEQGLHRTPEPGDGGDTFYALSMFPYPSGNLHMGHVRNYVITDVIARVQRLRG 85


>gi|319776160|ref|YP_004138648.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123331|ref|ZP_08251896.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
 gi|317450751|emb|CBY86971.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471331|gb|EGF16783.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
          Length = 682

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 194 DLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYV 253

Query: 303 DMD---RKQLLFRSTMVGDDVDRPLLKSDGS----YTYFAADLAYFKCKYERGFDNMIYV 355
            +D        F++    + +D     ++GS    Y +   D+ YF              
Sbjct: 254 WLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYF-------------- 299

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +  DG   KMSK  G FI     ++
Sbjct: 300 ----HSLF---WPAMLEGSGYRKPT-NVFAHGYVTV--DGA--KMSKSRGTFIQASTYLN 347

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
            +  + +R+    + N  + D DF       + N 
Sbjct: 348 HIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|315151460|gb|EFT95476.1| glutamyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 503

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 100/298 (33%), Gaps = 57/298 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G+ + A+                    Y+            +  ++    
Sbjct: 17  APSPTGFLHLGNAQSALF------------------NYL-----------FAKHYKGTWV 47

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L   D+DL      G   +            E  + P+E++ P  +   V    K ++  
Sbjct: 48  LRIEDTDLKRNVPHGEESQMENLHWLGIDWDEGPDKPKEEFAPYHQKERVSLYHKYVQQL 107

Query: 249 LKALNIQHDIFISEDDF---------------HRG-DPSPIRDIIDNLARQGYVYEGILP 292
           L A  + +  + +E++                + G      ++ I     +G      L 
Sbjct: 108 LDA-GLAYKDYATEEELTELHDQQMAAKIAPHYDGRWYGATKEQIKKAEAEGRKPTVRLH 166

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            PK+      DM +  + F S  +G D    + KS+G  TY   + A     Y     ++
Sbjct: 167 LPKNHVYSWDDMIKGTVSFNSDNIGGDF--IIEKSNGMATY---NFAVVIDDYLMKISHV 221

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           +   G DH     +  AV  A+   +     L   +  +Y      K+SKR  + +  
Sbjct: 222 LR--GDDHIANTPKQLAVYEALGIPQP----LFGHITLIYSLETHKKLSKRDKNTLQF 273


>gi|297677730|ref|XP_002816707.1| PREDICTED: LOW QUALITY PROTEIN: valyl-tRNA synthetase-like [Pongo
           abelii]
          Length = 1269

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYTWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 485

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
            KMSK  G+F T+R ++D+   +++R+ +L       LDF F  ++E  K 
Sbjct: 264 EKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSPLDFSFDALEEAEKG 314


>gi|265767521|ref|ZP_06095187.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263252826|gb|EEZ24338.1| glutamyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 505

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 99/290 (34%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MAERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++      D  +  G   G Y +   +E+  KY   LL+            + 
Sbjct: 57  EEYILESFKWLGIQFDEGVSFGGEYGPYRQSERREIYKKYVQVLLDNG-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
               + + R ++     Q+D   S     R   +  ++ ++ L   G  Y        ++
Sbjct: 112 TPEELDVKRAEIANF--QYD--ASTRVGMRNSLTLPKEEVEALIADGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DIHVNDLIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A   +          L+         K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWEDTMPAFAHLPLLLKPEG--NGKLSKRDGD 267


>gi|238810052|dbj|BAH69842.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 794

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161
             P+G +H+GH R   +GD LA      G+ V
Sbjct: 55  PYPSGNIHMGHVRNYAIGDVLARYYRRKGFNV 86


>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|187629838|sp|A5D5M0|SYC_PELTS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 484

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 100/338 (29%), Gaps = 44/338 (13%)

Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175
              +  +V +          +H+G+ R  V  DT+   +   GYEV       D   +I 
Sbjct: 15  QPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYEVLFVQNFTDVDDKII 74

Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
             A             +D       Y G Y K           ++ LN       P+V +
Sbjct: 75  NRAQE---------EGDDPLALARRYIGEYFKD----------ADALNVRRADRHPLVSE 115

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
           +    +   + D+L      + +              +   +   A  G +    L   +
Sbjct: 116 HIPDII--KMVDELVKKGAAYVV-----------DGNVYFEVRKFAGYGKLSGRTLEDMQ 162

Query: 296 SKTTQKCDMDRK-----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           +    + D  ++      L   +       D P     G   +     A         FD
Sbjct: 163 AGARVEVDPRKRDPLDFALWKAAKPGEPCWDSPW--GPGRPGWHIECSAMSLKYLGTNFD 220

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
               + G  +       E   A       Q  V    +   +      KMSK  G+F  +
Sbjct: 221 ----IHGGGYDLIFPHHENEIAQSEAATGQPFVRYW-MHNGFITVNEEKMSKSLGNFFLV 275

Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           R ++ +   + VRF +L       LDFD  K+    + 
Sbjct: 276 RDILAKFPPELVRFFLLSTHYRSPLDFDGEKMAAAGRG 313


>gi|14590812|ref|NP_142884.1| leucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6919978|sp|O58698|SYL_PYRHO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|75765429|pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And
           Trna(Leucine) Complex
 gi|75765430|pdb|1WZ2|B Chain B, The Crystal Structure Of Leucyl-Trna Synthetase And
           Trna(Leucine) Complex
 gi|3257379|dbj|BAA30062.1| 967aa long hypothetical leucyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 967

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 83/284 (29%), Gaps = 37/284 (13%)

Query: 89  INLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N   +   + ++ L + +    E       K  K  I       +G +HVGH R   + 
Sbjct: 4   LNFKAIEEKWQKRWLEAKI---FEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIP 60

Query: 148 DTLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYY-- 201
           D +A      GY V     ++I   G+ I  +A  +  R  +   +Y +   +PE     
Sbjct: 61  DVIARFKRMQGYNVLFPMAWHI--TGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWT 118

Query: 202 ------PGVYLKHVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
                    Y     KE   +          F      P    +      K+        
Sbjct: 119 FEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVK 178

Query: 253 NIQHDIF-------ISEDDFHRGDPSPIRDIID---NLARQGYVYEGILPPPKSKTTQKC 302
                 +       + + D   G+  PI D I     L   G V        + +T    
Sbjct: 179 GAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENGEVIYLPAATLRPETVYGV 238

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
                 +          V   + + D   T+  +  A +K  ++
Sbjct: 239 T----NMWVNPNAT--YVKAKVRRKDKEETWIVSKEAAYKLSFQ 276


>gi|88802742|ref|ZP_01118269.1| putative valyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781600|gb|EAR12778.1| putative valyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 878

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 51/210 (24%), Gaps = 33/210 (15%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
             +           Y  +   +     I     N TG +H+GH     + D L       
Sbjct: 11  QAEGKWYDYWMKNNYFHSTPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLL 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           G         + A   I T A  V     Q +  +D                  +  D+Y
Sbjct: 71  GKNACWVPGTDHA--SIATEAKVVAKLKAQGIQKSD-------LTREEFLQHAFDWKDEY 121

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
                                     II + LK L    D   +           +  + 
Sbjct: 122 G------------------------GIILEQLKKLGASCDWERTAFTMDPEMSESVIKVF 157

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
            +L  +G +Y G          +    D +
Sbjct: 158 VDLYNKGLIYRGYRMVNWDPEAKTTLSDEE 187


>gi|289209715|ref|YP_003461781.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288945346|gb|ADC73045.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 948

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 17/166 (10%)

Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           GSD   G+ +     + A+  +     VL         D    KMSK  G+ +  + VV 
Sbjct: 569 GSDQHRGWFQSSLLTSVAMRGEAPYRAVLTHGF---TVDEKGEKMSKSRGNVVAPQEVVS 625

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475
            +G+D +R  +     S  +      +   +          AY R R+  R         
Sbjct: 626 TLGADILRLWVAATDFSGEMAISKDILDRTAD---------AYRRIRNTTRFLLGNLNGF 676

Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521
           D    P     +  E    +  ++    +    +  A      +++
Sbjct: 677 D----PAEHALELDELLPLDRWIVARALQVQEQVTKAYDDYLFHQI 718


>gi|260793022|ref|XP_002591512.1| hypothetical protein BRAFLDRAFT_287206 [Branchiostoma floridae]
 gi|229276719|gb|EEN47523.1| hypothetical protein BRAFLDRAFT_287206 [Branchiostoma floridae]
          Length = 932

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 357 GSDH--SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           G D     YVK    + +     K     L+   + L  DG   KMSKR  ++     VV
Sbjct: 557 GIDQTRGWYVKLCLEILSTALFGKPPFKNLIVNGLVLAADGQ--KMSKRKKNYPDPMDVV 614

Query: 415 DEVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKE 448
            + G+D++R  ++      ++ L F    V++  K+
Sbjct: 615 HKYGADALRLYLINSPVVRADSLRFKEDGVRDVLKD 650


>gi|110668247|ref|YP_658058.1| leucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109625994|emb|CAJ52439.1| leucine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 907

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 333 YFAADLAYFKCKYERGFDNMI---YVMGSDH---SGYVKRLEAVAAAVSEKKAQINVLLC 386
           Y + D+       ER    M    YV G +H        R      A ++  A       
Sbjct: 501 YVSPDIETEPFDIERTNQWMPVDQYVGGIEHAVMHLLYSRFFTKVLAENDDLAVTEPFEN 560

Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441
            L +        KMSK  G+ ++ + +V+E G+D+ R  M+     E  DFD+ +
Sbjct: 561 LLAQGMVQLDGEKMSKSKGNTVSPQRIVEEYGADTARLFMMQAAQPER-DFDWSE 614


>gi|77165713|ref|YP_344238.1| glutamyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434786|ref|ZP_05048294.1| glutamyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|115305751|sp|Q3J8Y8|SYE2_NITOC RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|76884027|gb|ABA58708.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase
           [Nitrosococcus oceani ATCC 19707]
 gi|207091119|gb|EDZ68390.1| glutamyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 472

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 97/290 (33%), Gaps = 52/290 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTR--EYYINDAGAQINTLALS 180
           + +P+G +H+G+ R A+    LA       L+     +  R  E Y+         L   
Sbjct: 11  APSPSGLLHLGNIRTALFNALLARRSRGLFLLRIEDTDQERSSEEYV-------TALMED 63

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWLPIVKDY 236
           + W   +     + +   G Y     + V +    +  +E L +P    +E+   + K  
Sbjct: 64  LRWLALEWQEGPEVEGEAGPYRQSQRRSVYQADFQRLEAEKLAYPCFCSQEELERVRKRQ 123

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                          L+                     + ++     G+        P  
Sbjct: 124 LAAGQAPRYPGTCARLS--------------------PEEVEGKLAAGFKSALRFRVPSL 163

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
            T +  D+ R    F +  +GD +   + ++DGS  +F ++          G  +++   
Sbjct: 164 TTIEFEDLVRGPQRFATGDIGDFI---IRRTDGSPAFFFSN---ALDDALMGVTHVLR-- 215

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G DH     R   +  A+     +   +    + + RDG P  +SKR G 
Sbjct: 216 GEDHLTNTPRQILLLRALGLPIPRYGHI---AMIVGRDGAP--LSKRHGS 260


>gi|323498216|ref|ZP_08103218.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323316644|gb|EGA69653.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 686

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLQEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSSTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPD-NVFVHGYVTV----NGAKMSKSKGTFIKAATYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           D +  + +R+    + NS + D D        + N
Sbjct: 348 DHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|154151747|ref|YP_001405365.1| glutamyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|229470629|sp|A7IAG1|SYE_METB6 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|154000299|gb|ABS56722.1| glutamyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 634

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           LSP     +        +         G  +     + NP+GP+H+GH R A + D 
Sbjct: 74  LSPEMFAALHEKHEKKKVLPDLEGAEHGVVMRF---APNPSGPLHIGHARAAALNDA 127


>gi|114769323|ref|ZP_01446949.1| valyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550240|gb|EAU53121.1| valyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 956

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 25/170 (14%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +     +         V  +   ++        L RD    KMSK  G+
Sbjct: 560 TGFD-IIFFWVAR---MMMMGIETMGKVPFETVYVHP-------LVRDEHGKKMSKSTGN 608

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466
            +    ++D+ G+D+VRF  L    +   D    + + +   N          +  +  R
Sbjct: 609 VMDPLDLIDKYGADAVRFT-LTAMAAMGRDLKLSENRIEGYRNFG-------TKLWNATR 660

Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516
            A+      + D  P++V    +++   E  L+         ++N+    
Sbjct: 661 FAEFNEASPNNDFDPKSVKQTLNKWIIGETALVR------EAVDNSLEQY 704


>gi|189347262|ref|YP_001943791.1| isoleucyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341409|gb|ACD90812.1| isoleucyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 1084

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   + A+A  + +  A  N+++   +    D    KMSK  G+ +     + 
Sbjct: 585 GVDQTRGWFYTMHAIATLIFDTVAYKNLIVNGHI---LDREGQKMSKSKGNVVDPFETMQ 641

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSK-------ENPVFYVQYA 457
             G+D++R+ +L          F+  +++E+ +        +  F+V YA
Sbjct: 642 RYGADALRWYLLVSSPPWRPKSFNTAEIEEEQRRFFRAFINSYNFFVLYA 691


>gi|260168670|ref|ZP_05755481.1| valyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261758145|ref|ZP_06001854.1| valyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261738129|gb|EEY26125.1| valyl-tRNA synthetase [Brucella sp. F5/99]
          Length = 910

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|167042222|gb|ABZ06954.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_ANIW93I24]
          Length = 951

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           RK     + +      +   +   + + +   N   P H+GH R   + D  +  +   G
Sbjct: 10  RKWQKKWLENNDHETDSNDKEKKFITVAYPYPN--SPQHIGHGRTYTITDVYSRYLRMKG 67

Query: 159 YEVT--REYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPG-VYLKHVGKEL 213
           + V     ++    G  I  ++  V     + L    N  ++P+      V    +    
Sbjct: 68  FNVLFPMGFHY--TGTPILGMSKRVEAGDAEILDGLKNIYNVPDEAIKTFVEPIKIANYF 125

Query: 214 ADKYSSELLNFPEE-KWLPIVK--DYSVQAMMKIIRDDLKALNIQ 255
             +  + ++       W       D + Q  ++   + LK  N+ 
Sbjct: 126 HQEIKAGMIEMGYSIDWRREFTTIDPAYQKFIEWQINTLKEKNLI 170


>gi|150004040|ref|YP_001298784.1| glutamyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254882904|ref|ZP_05255614.1| glutaminyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294778078|ref|ZP_06743512.1| glutamate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319639708|ref|ZP_07994441.1| glutamyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166200160|sp|A6L0E8|SYE_BACV8 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|149932464|gb|ABR39162.1| glutamyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254835697|gb|EET16006.1| glutaminyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448136|gb|EFG16702.1| glutamate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317388672|gb|EFV69518.1| glutamyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 505

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 102/290 (35%), Gaps = 24/290 (8%)

Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177
               KV + F + +PTG +H+G  R A+     A      G ++       D+   +   
Sbjct: 1   MSERKVRVRF-APSPTGALHIGGVRTALYNYLFARQH---GGDLIFRIEDTDSNRFVPGA 56

Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237
              +   ++    N D  +  G   G Y +   +++  KY   LL+            + 
Sbjct: 57  EEYIIESFKWLGINFDEGVSFGGNYGPYRQSERRDIYKKYVQVLLDSG-----KAYIAFD 111

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             A +   R ++     Q+D   S     R   +  ++ +D L   G  Y        ++
Sbjct: 112 TPAELDAKRQEISNF--QYD--ASTRMSMRNSLTLPKEEVDALIADGKQYVVRFKIEPNE 167

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYTYFAADLAYFKCKYERGFDNMIYVM 356
                D+ R +++  S+++    D+ L KS D   TY    LA     +     ++I   
Sbjct: 168 DVHVHDIIRGEVVINSSILD---DKVLYKSADELPTYH---LANIVDDHLMEVSHVIR-- 219

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           G +          +  A              L+ L  DG   K+SKR GD
Sbjct: 220 GEEWLPSAPLHVLLYRAFGWADTMPEFAHLPLL-LKPDGNG-KLSKRDGD 267


>gi|154706352|ref|YP_001424850.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082995|sp|A9KCQ4|SYL_COXBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154355638|gb|ABS77100.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 820

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           P+ + ++          +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PTLIEQLAQEYWEENETFEVKEDLSREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQ 66

Query: 153 ------LMAFSGYEVTR 163
                 ++   G++   
Sbjct: 67  IHKGRNVLQPMGWDAFG 83


>gi|90021548|ref|YP_527375.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|109894935|sp|Q21JG6|SYC_SACD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89951148|gb|ABD81163.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 459

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 74/254 (29%), Gaps = 29/254 (11%)

Query: 271 SPIRDIIDNLARQGYVYE----------GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            P+  ++  L  +G+ YE           +    K       DM     +  +       
Sbjct: 120 EPMIAMVAALVEKGHAYEADGHVLFDVQSMKNYGKLSNRALEDMLDGARVEVADYKRYAG 179

Query: 321 DRPLLK--SDGSYTYFAA----DLAYFKC---KYERGFDNMIYVMGSDHSGYVKRLEAVA 371
           D  L K  +D    + +        +        E    N I + G          E   
Sbjct: 180 DFVLWKPSADDEPGWASPWGRGRPGWHLECSAMIETHLGNTIDIHGGGRDLIFPHHENEL 239

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
           A           +   +   Y +    KMSK  G+F T+R ++ +   +++RF +L  + 
Sbjct: 240 AQSECAHGGEEYVRYWMHNGYVNIDGEKMSKSLGNFRTVRDLLQQYHGETIRFALLSAQY 299

Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESE 490
              LDF    + +        Y            + A     D +D       +   +  
Sbjct: 300 RSELDFSVSLLDQSKAGLDTLY---------GALKNAPATSTDAVDLSDNAGYLALLDDL 350

Query: 491 FDTSELQLIVHLAE 504
                +  +  LA+
Sbjct: 351 NTPQVIAELHRLAK 364


>gi|120554808|ref|YP_959159.1| glutamyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166226834|sp|A1U1V3|SYE_MARAV RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|120324657|gb|ABM18972.1| glutamyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 493

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 51/288 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTG  HVG    A+     A       ++     +  R      A ++ + L  ++
Sbjct: 7   IAPSPTGDPHVGTAYVALFNLCFARQHGGQFILRIEDTDQARST----AESEQDIL-TAL 61

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDY 236
            W         D   P G Y     KH+  + A+      ++      PEE         
Sbjct: 62  RWLGLNWDEGPDVGGPHGPYRQSERKHMYGQYAEDLVTAGHAFYCFRTPEE--------- 112

Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296
                +  IR++ KA  +   I        +GD     + +      G  Y   +  P  
Sbjct: 113 -----LDAIREERKAQGLNPGI--------KGDLELPEEEVKRRLDAGDPYVIRMKVPDE 159

Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356
              +  DM R  +      V     + LLKSDG  TY    LA     +  G  +++   
Sbjct: 160 GVCEIQDMLRGTIEIDWAQVDC---QILLKSDGMPTYH---LANVVDDHLMGITHVLR-- 211

Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
           G +      + + +         ++       + L R+    K+SKR 
Sbjct: 212 GEEWINSAPKHKLLYQYFGWDMPELCH-----LPLLRNPDKSKLSKRK 254


>gi|298506245|gb|ADI84968.1| leucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 824

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y+  +   K       +          K     +E     P+G +H+GH R   +GD + 
Sbjct: 5   YIPKNVEGKWQEIWDKNKTFTVTEDPSKPKYYLLEMF-PYPSGRIHMGHVRNYSIGDVVG 63

Query: 152 SLMAFSGYEV 161
                 G+ V
Sbjct: 64  RFKRMRGFNV 73


>gi|291515868|emb|CBK65078.1| valyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 878

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 43/254 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  +        +    +  +   +     I     N TG +H+GH     + D L   
Sbjct: 8   APQQIESKWYDYWIEQHIFH-SEPDQREPYTIVIPPPNVTGMLHMGHMLNNTLQDVLVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG               ++  +++   +    L     +         +L+H   E 
Sbjct: 67  ARMSGKNAC-------WVPGMDHASIATEAKVVAMLREKGIE-KSSLTREEFLRH-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY                          +I   L+ L    D   +           +
Sbjct: 118 KEKYG------------------------GVILKQLRKLGASCDWDRTCFTMDEARTESV 153

Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--------DDVDRPLL 325
             +  +L  +G +Y G+         Q   +  ++++F+ +           +  DR ++
Sbjct: 154 LRVFCDLYEKGKIYRGVRMVNWDPAAQTA-LSDEEVVFKESHGKLYYLRYKVEGTDRAII 212

Query: 326 KSDGSYTYFAADLA 339
            +         D A
Sbjct: 213 VATTRPETILGDTA 226


>gi|229829224|ref|ZP_04455293.1| hypothetical protein GCWU000342_01311 [Shuttleworthia satelles DSM
           14600]
 gi|229792387|gb|EEP28501.1| hypothetical protein GCWU000342_01311 [Shuttleworthia satelles DSM
           14600]
          Length = 482

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 137/393 (34%), Gaps = 71/393 (18%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y++        + +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLVAKHAGGDFILRI-----EDTDQERYVD------GAVDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                 +  L +++    +G   G Y++     + +  KY+ +L++  E  +        
Sbjct: 58  IYRTLAKTGLIHDEGPDKDGG-VGPYVQSERQAQGIYLKYAKKLIDRGE-AYYCFCTPER 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           +  +   + D   A+  +H +        R  P  I+  +D       +   I      +
Sbjct: 116 LANLKVKVGDKEIAIYDKHCL--------RLTPEEIQAKLDAG-----IPYVIRQNNPRE 162

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D +    +       DD+   L+KSDG  TY   + A     +  G  ++  V G
Sbjct: 163 GQTSFDDEIYGHISVDNAELDDM--ILIKSDGYPTY---NFANVVDDHLMGITHV--VRG 215

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           +++     +   +  A   +      + C L+    +    K+SKR+G       +    
Sbjct: 216 NEYLSSAPKYNRLYEAFGWEVP--TYIHCPLIT---NTDHQKLSKRSGHSSYEDLIAQGF 270

Query: 418 GSDS-VRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465
            SD+ V ++ L   + E           +L FD+ ++ +            A      + 
Sbjct: 271 LSDAIVNYVALLGWSPEENREIFSLKELVLAFDYHRLSKSP----------AVFDIEKLK 320

Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498
               +    L FD F    +P   E+   E  L
Sbjct: 321 WMNGEYIKALPFDTFYEMALPYLREYIRGEYDL 353


>gi|154285550|ref|XP_001543570.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
 gi|150407211|gb|EDN02752.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
          Length = 665

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 86/285 (30%), Gaps = 32/285 (11%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN--DAGAQINTLALSVFWRY 185
                    H+GH R  V  D L  +M    ++   E+ +N  D   +I   A + F   
Sbjct: 54  CGPTVYDDAHLGHARNYVTNDILRRIMRDY-FKFDVEFIMNITDVDDKIVRSAFAAFL-E 111

Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245
           +          PE Y           E A+K  + +LN           D   +  MKI 
Sbjct: 112 RNLPLLEAGLAPERY----------GEEAEKVYAAILNGAALDGSEKPGDEEAKLKMKIK 161

Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305
                A  +       E        + ++D++         Y   +     +   +    
Sbjct: 162 TASSAANALTKVSCAKESILSETFYNDVQDVL-------LEYLDSIHGSSIRGEDRTIFT 214

Query: 306 RKQLLFRSTMVGDDVDRPLLKSD--GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
           +    +    + D  D  +L  D     T +  ++  F  +  +      YV  SD S Y
Sbjct: 215 KLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKH--RFGYVT-SDGSVY 271

Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM----PIKMSKRA 404
                    A     A++        +L+ +G        M KR+
Sbjct: 272 FD--IGAFEAAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRS 314


>gi|161830613|ref|YP_001596489.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082996|sp|A9NC49|SYL_COXBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161762480|gb|ABX78122.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 820

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           P+ + ++          +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PTLIEQLAQEYWEENETFEVKEDLSREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQ 66

Query: 153 ------LMAFSGYEVTR 163
                 ++   G++   
Sbjct: 67  IHKGRNVLQPMGWDAFG 83


>gi|29653898|ref|NP_819590.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|48428541|sp|Q83DY1|SYL_COXBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29541161|gb|AAO90104.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 820

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           P+ + ++          +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PTLIEQLAQEYWEENETFEVKEDLSREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQ 66

Query: 153 ------LMAFSGYEVTR 163
                 ++   G++   
Sbjct: 67  IHKGRNVLQPMGWDAFG 83


>gi|15828564|ref|NP_325924.1| leucyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|29337030|sp|Q98RB6|SYL_MYCPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14089506|emb|CAC13266.1| LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA LIGASE) [Mycoplasma pulmonis]
          Length = 807

 Score = 39.1 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 11/128 (8%)

Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVSEKK 378
            L  +DGS  Y   D    K ++++     +Y+ G +H+     Y +        +    
Sbjct: 501 ILKNADGS--YEKLDSEEAKKRFKKWLPVDLYIGGQEHAVLHLLYSRFWHRFLYDIGVVP 558

Query: 379 AQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELL 435
            +     ++ + + L  DG   KMSK  G+ I    +VDE+G+D++R + M     ++  
Sbjct: 559 TKEPFQKVVNQGMILGTDGQ--KMSKSRGNIINPSEIVDELGADTLRVYEMFMGPLTDDK 616

Query: 436 DFDFCKVK 443
           D+    +K
Sbjct: 617 DWQVESIK 624


>gi|297170410|gb|ADI21442.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_10G19]
          Length = 803

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  + K +         Y      +     +      P+G +H+GH R   +GD ++  
Sbjct: 6   NPQKIEKTVQKFWEDNNCYRAIKNDQKKFYCLSMF-PYPSGKLHMGHVRNYTIGDVISRY 64

Query: 154 MAFSGYEV 161
               G+ V
Sbjct: 65  KRMRGFNV 72


>gi|312891714|ref|ZP_07751223.1| valyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295797|gb|EFQ72957.1| valyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 918

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 58/213 (27%), Gaps = 35/213 (16%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
                K  S  + +G  + R++  +     I     N TG +H+GH     + D L    
Sbjct: 22  KQAEDKWYSYWMENG--FFRSVPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRA 79

Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214
              G         + A   I T A  V    ++ +   D                  E  
Sbjct: 80  RMKGKNACWVPGTDHA--SIATEAKVVAMLKERGITKKD-------LSREEFLTYAWEWK 130

Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274
           +KY                          II + LK L    D   +           + 
Sbjct: 131 EKYG------------------------GIILEQLKKLGASCDWERTRFTMDPDLSEAVI 166

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           D   +L ++  +Y GI         +    D +
Sbjct: 167 DTFIHLYKKDLIYRGIRMVNWDPQGKTAVSDEE 199


>gi|301166931|emb|CBW26510.1| Lysyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 527

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 40/333 (12%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT-LALSVFWRYQ 186
               P+G +H G+ R  +  D +A  +   G +V   +  +D        L L      +
Sbjct: 34  SGITPSGVVHFGNFREVITVDFVARALRDRGKKVRFIFSWDDYDTFRKVPLNLPKQEELK 93

Query: 187 QALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK-- 243
           + L+    D P+ +     Y  H  +    +     +           +    +  ++  
Sbjct: 94  EYLFRPIVDTPDPFEEAESYAAHHEQNFEAQLDKVGVEVQPIYQAKKYRAGDYKEQIRKA 153

Query: 244 -IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
             ++ D+  +  ++      D+++          I     +    E  +     K     
Sbjct: 154 LEMKKDIAGILNEYRSTPYGDEYYP---------ISVYCEKYLTDETEIIDWDGKNKITY 204

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDG--SYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
                       +   D  +   + D    + Y   D       +E G        G DH
Sbjct: 205 KHKVHDYTGEIDLETTDKVKLPWRVDWPMRWVYEGVD-------FEPG--------GKDH 249

Query: 361 SG----YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
           S     Y    + V     E    +         +   G   KMS   G+ IT+  V+  
Sbjct: 250 SSQGGSYTTAKDIVKLYGGEAPVYLQYDF-----VSIKGAGGKMSSSKGNLITVNDVLKV 304

Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
              + VR++    K++      F     ++ E+
Sbjct: 305 YEPEMVRWIFASYKSNVDFAVSFDLDVLKTYED 337


>gi|168334229|ref|ZP_02692430.1| isoleucyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 1040

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 12/110 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  + +     NV++   V    D   +KMSK  G+ +    V+D  
Sbjct: 552 DQTRGWFYTLMAISTLIFDVAPYKNVIVMGHV---CDQHGLKMSKSKGNVVEPFSVIDVT 608

Query: 418 GSDSVRFMMLWRKNSEL-LDFDFCKVKEQSKE-------NPVFYVQYAYA 459
           G+D+VR+   +     L   F    V E S++          FY+ YA  
Sbjct: 609 GADAVRWYFYYASAPWLPSRFGIDNVTEASRKFMGTVLNTYAFYILYADI 658


>gi|126668112|ref|ZP_01739074.1| glutamyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627382|gb|EAZ98017.1| glutamyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 495

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 95/284 (33%), Gaps = 43/284 (15%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSV 181
           ++ +PTG  HVG    A+     A       ++     +  R           +   +  
Sbjct: 8   IAPSPTGDPHVGTAYVALFNLCFARQHGGQFILRIEDTDQARS-------TPESEQEILT 60

Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241
             R+    ++   D+  G   G Y +   K+   +Y+ +L+      +      +     
Sbjct: 61  ALRWLGLNWDEGPDV--GGPHGPYRQSERKDSYAQYAEDLVTAGHAFYC-----FRTPEE 113

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +IR++ KA  +   I        +G+     + +      G  Y   +  P     + 
Sbjct: 114 LDVIREERKAAGLNPGI--------KGNLELSPEEVHRRREAGDAYVIRMKVPDDGVCEV 165

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM-GSDH 360
            DM R  +      V     + LLKSDG  TY  A++       +     + +V+ G + 
Sbjct: 166 VDMLRGTIEIDWAQVDC---QILLKSDGMPTYHLANV------VDDHLMEITHVLRGEEW 216

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                + + +          +       + L R+    K+SKR 
Sbjct: 217 INSAPKHKLLYEYFGWDMPVLCH-----LPLLRNPDKSKLSKRK 255


>gi|86150842|ref|ZP_01069058.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124548|ref|YP_004066552.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842012|gb|EAQ59258.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018270|gb|ADT66363.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 917

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|94311566|ref|YP_584776.1| valyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93355418|gb|ABF09507.1| valyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 955

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 60/222 (27%), Gaps = 46/222 (20%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        GI        +     I+    N TG +H+GH     + D L       G
Sbjct: 19  AKWGPEWERRGIAQPTFDANRPD-FAIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMRG 77

Query: 159 YEVTREYYINDAG--AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216
                    + AG   QI      V  R  +A              GV    +G+    K
Sbjct: 78  ANTLWVPGTDHAGIATQI------VVERQLEA-------------QGVSRHDLGR---AK 115

Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276
           ++ ++  + EE    I +              ++ +    D               + ++
Sbjct: 116 FTEKVWEWKEESGSTITRQ-------------VRRMGASIDWTREYFTMSPEMSKAVTEV 162

Query: 277 IDNLARQGYVYEG--------ILPPPKSKTTQKCDMDRKQLL 310
              L  QG +Y G        +L    S        +   L 
Sbjct: 163 FVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVEEDGSLW 204


>gi|315638950|ref|ZP_07894121.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480979|gb|EFU71612.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 870

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 104/336 (30%), Gaps = 54/336 (16%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+  +++  +G    I     N TG +H+GH     + D +       GY+   +  ++ 
Sbjct: 22  IDSNKSIQKEGKNFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMDGYKTLYQPGLDH 81

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG  I T  +       Q +   +                  E  ++   ++L     + 
Sbjct: 82  AG--IATQNVVEKQLLAQGITKEE-------LGREKFIEKVWEWKEQSGGKIL-----EQ 127

Query: 230 LPIVKDYSVQAMMKIIRDD--LKALNIQHDIFISEDDFHRGD--------PSPIRDI-ID 278
           +  +      + ++   DD    A+         E    RG+           + DI ++
Sbjct: 128 MRTLGITPAWSRLRFTMDDGLANAVKKAFVKLYDEKLIVRGNYMINWCTHDGALSDIEVE 187

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-------------MVGDDVDRPLL 325
               +G +Y        S+        R +  F  T              VG +V  PL 
Sbjct: 188 YKENKGKLYHIKYFLKDSEEFLVVATTRPETFFGDTAVMVHPDDERYAKFVGKEVVLPLS 247

Query: 326 K------SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379
           K      +D S      D      K     D   Y +G  H            +V ++K 
Sbjct: 248 KKAIKIIADES---VEKDFGTGVVKVTPAHDMNDYEVGLRHHLEF-------LSVFDEKG 297

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
            +N    E + L R     K+ ++  +   +  + +
Sbjct: 298 ILNEHCLEFMGLERLEAREKIVQKLENLGFIEKIEE 333


>gi|310657932|ref|YP_003935653.1| valyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824710|emb|CBH20748.1| valyl-tRNA synthetase [Clostridium sticklandii]
          Length = 884

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 67/267 (25%), Gaps = 39/267 (14%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P      +      G  +   +       +I     N TG +H+GH     + D L   
Sbjct: 9   DPKEFESRIYKQWEEGGYFKARMKAGQPSYSIVLPPPNITGQLHMGHALDHTLQDILIRW 68

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G+    +      G    ++A  V                        +K      
Sbjct: 69  KRMQGFNTLWQP-----GTDHASIATEVK-------------------VVERIKEQEGLS 104

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            ++   +   F +  W  + K+         I + +K L    D          G    +
Sbjct: 105 KEELGRD--EFLKRAW--VWKE----EFGGKIVEQMKKLGDSCDWERERFTMDEGCNKAV 156

Query: 274 RDIIDNLARQGYVYEG-------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326
            +    L   GY+Y G       +         +    +     +       D D  +  
Sbjct: 157 TEFFVRLYNDGYIYRGNRIINWCVDCKTSLSDAEVEHDEVAGNFYHVNYKVKDSDEVIEI 216

Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMI 353
           +         D A      +  F +++
Sbjct: 217 ATTRPETILGDTAVAVNPNDDRFKHLV 243


>gi|302037068|ref|YP_003797390.1| valyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605132|emb|CBK41465.1| Valyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 920

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     ++      +  L RD    KMSK  G+ I   HV+
Sbjct: 513 VTGLD-ILFFWVARMIMMGLKF-MGEVPFRDVYIHALVRDAEGQKMSKSKGNVIDPLHVM 570

Query: 415 DEVGSDSVRFMM 426
           ++ G+D++RF M
Sbjct: 571 EQFGTDALRFTM 582


>gi|212212949|ref|YP_002303885.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064865|sp|B6J1B2|SYL_COXB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212011359|gb|ACJ18740.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 820

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           P+ + ++          +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PTLIEQLAQEYWEENETFEVKEDLSREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQ 66

Query: 153 ------LMAFSGYEVTR 163
                 ++   G++   
Sbjct: 67  IHKGRNVLQPMGWDAFG 83


>gi|152980423|ref|YP_001352518.1| isoleucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166229744|sp|A6SW71|SYI_JANMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151280500|gb|ABR88910.1| isoleucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 958

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 22/231 (9%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAAD 337
              G ++    P    +  Q+ + D  +         ++G D D  L   D    +F + 
Sbjct: 508 KETGDLHPRT-PELLEQIAQRVEKDGIEAWLTLDPKELLGADADMYLKNKDTLDVWFDSG 566

Query: 338 LAYFKC-----KYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391
             +        K E  F   +Y+ GSD   G+       ++ ++ +     +L       
Sbjct: 567 CTHQTVLRGSHKEELAFPADLYLEGSDQHRGWFHSSLLTSSMMNGRAPYKALLTHGF--- 623

Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE--- 448
             DG   KMSK  G+ +  + + D +G+D +R  +     S  L      +K  ++    
Sbjct: 624 TVDGEGKKMSKSLGNTLAPQKISDTLGADILRLWIASTDYSGELSISDEILKRVTESYRR 683

Query: 449 --NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
             N V ++        S F  AKD+ P  D     R  + Q +      L 
Sbjct: 684 IRNTVRFL----LSNTSDFDAAKDLVPVADMLEIDRYAVAQMNAMQAEILA 730


>gi|306820218|ref|ZP_07453861.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551764|gb|EFM39712.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 1036

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 12/112 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  V       NVL+ +L+    D    KMSK  G+ +    + +
Sbjct: 552 GIDQTRGWFYSLIAIATYVDGVSPYKNVLVNDLI---LDKNGKKMSKSKGNTVDPFELFE 608

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKEN-------PVFYVQYAYA 459
           + G+D++R+ +L+   +     FD   +KE   +          F+V YA  
Sbjct: 609 QYGADALRWYLLYVSPAWSPTKFDIDGLKEVQSKFFSTIKNIYNFFVLYANT 660


>gi|296394167|ref|YP_003659051.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181314|gb|ADG98220.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 902

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           L RD    KMSK  G+ I     +D  G+D+ RF +L 
Sbjct: 527 LVRDEKGQKMSKTKGNVINPLDWLDRFGADATRFALLR 564


>gi|290994685|ref|XP_002679962.1| predicted protein [Naegleria gruberi]
 gi|284093581|gb|EFC47218.1| predicted protein [Naegleria gruberi]
          Length = 648

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 60/225 (26%), Gaps = 25/225 (11%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
             P+G +H+GH R   + D +A      GY V   +  +  G      A+          
Sbjct: 19  PYPSGNLHMGHVRVYTISDLIARTHKMLGYNVIHPFGFDAFGLPAENAAIERGVSPADWT 78

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
           + N + + E      +     +E+              KW   +     +  +   ++ L
Sbjct: 79  HKNIAHMKEQIKALDFDFDWEREVITCNPEYY------KWTQWLFLQLHKKGLAYQQEAL 132

Query: 250 KALN-----------------IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
              +                       + E    R     IR+  + L       E    
Sbjct: 133 VNWDPIDNTVLANEQVDSQGRSWRSGALVERKNLRQWFFKIREFANELLEDADTLENWPI 192

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY--TYFA 335
             ++   Q             T  G  +     + D  Y  TY A
Sbjct: 193 NVRTMQKQWIGKSEGAEFSFETTSGSKITVFTTRPDTIYGVTYLA 237


>gi|290994673|ref|XP_002679956.1| isoleucyl-tRNA synthetase [Naegleria gruberi]
 gi|284093575|gb|EFC47212.1| isoleucyl-tRNA synthetase [Naegleria gruberi]
          Length = 1087

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 12/123 (9%)

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           V       K     ++   + L  DG   KMSK   ++   + V+D+ GSD++R  ++  
Sbjct: 586 VLGTALFDKCPFQNVIVNGLVLAEDG--SKMSKSKKNYPDPQIVIDKHGSDALRLYLINS 643

Query: 430 K--NSELLDFDFCKVKEQSKENPVFYVQYAYARCR----SIFRQAKDIFPDLDFDLFPRN 483
               +E L F    V +  KE     +   Y   R    S+ R   +   D + D+    
Sbjct: 644 PVVRAEPLKFKEDGVFDVVKE----ILLQWYNAYRFFVQSVKRYVDETGEDFNSDIANAA 699

Query: 484 VIP 486
            I 
Sbjct: 700 KID 702


>gi|237741055|ref|ZP_04571536.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431099|gb|EEO41311.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 709

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 20/208 (9%)

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
           I ++   +E+ FH+     I D++       +V +        +  +K ++   +L   +
Sbjct: 474 IFYNDETNEEIFHKEILDRICDLVRENGSNIWVEKSPEELIGEELLEKYNLKGLKLRKET 533

Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAA 372
            ++    D       GS       +        R  D  +Y+ GSD   G+       + 
Sbjct: 534 NIMDVWFD------SGSSH---RGVLEVWEGLRRPAD--LYLEGSDQHRGWFHTSLLTSV 582

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A +      +VL    V    DG   KMSK  G+ ++   V+   G+D +R         
Sbjct: 583 ASTGDSPYKSVLTHGFVN---DGEGRKMSKSLGNTVSPEDVIKVYGADILRLWCGSVDYR 639

Query: 433 ELLDFDFCKVKEQSK-----ENPVFYVQ 455
           + +      VK+ S+      N   Y+ 
Sbjct: 640 DDVRISDNIVKQMSEAYRRIRNTARYIL 667


>gi|221202477|ref|ZP_03575508.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208066|ref|ZP_03581071.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171969|gb|EEE04411.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177650|gb|EEE10066.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 864

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTQEDAQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|218288407|ref|ZP_03492697.1| Glutamate--tRNA ligase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241380|gb|EED08554.1| Glutamate--tRNA ligase [Alicyclobacillus acidocaldarius LAA1]
          Length = 327

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 94/295 (31%), Gaps = 30/295 (10%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG+   A++    A      G  V R   ++DA              Y++A
Sbjct: 10  APSPTGFLHVGNAWVALLAWLDAR--RADGAFVLRIEDLDDA---------RSRATYREA 58

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +  +   L   +  G  +       A  Y   L     E+ L  +++          R  
Sbjct: 59  ILEDLRWLGIDWDEGPDV----GGPAAPYEQRLRRGLYEQVLERLREQRELYPCFCTRSR 114

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           L ++        +++  +      + D        G      L  P        D     
Sbjct: 115 LLSIASAPHGLFADEPRYDRRCYRLSDAERAELAAGKEPSLRLHVPDDALVTVDDRLLGS 174

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
              R    GD     + ++DG   Y    LA     +  G  ++I   G+D      R  
Sbjct: 175 TTARPAEGGDF---VVRRADGVIAYH---LAVVVDDHTMGVTDVIR--GADLFPSAFRQA 226

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
            +A  +     +        V L  D    +++KR GD       + E+G  S R
Sbjct: 227 YLAERLGYASPR-----YAHVPLVIDEEGRRLAKRHGDLSLKS--LRELGVRSER 274


>gi|254450196|ref|ZP_05063633.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264602|gb|EDY88872.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 851

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K  ++   +          K     +E     P+G +H+GH R   +GD +A     +G
Sbjct: 11  AKWQAAWDKAETFKTTRSDDKPKYYVLEMF-PYPSGRIHIGHVRNYTMGDVIARYKLATG 69

Query: 159 YEV 161
           + V
Sbjct: 70  HNV 72


>gi|161525901|ref|YP_001580913.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349380|ref|YP_001945008.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687066|sp|A9AHA9|SYL_BURM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160343330|gb|ABX16416.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333402|dbj|BAG42472.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 864

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTQEDAQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|11498023|ref|NP_069247.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
 gi|3122884|sp|O29836|SYC_ARCFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2650218|gb|AAB90823.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
          Length = 467

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 100/315 (31%), Gaps = 59/315 (18%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R AV  D     + + GYEV       D   +I   A+      ++       + 
Sbjct: 37  HIGHARSAVFFDVFRRYLEYLGYEVVYVQNFTDVDDKIINRAVKEGKTQKEVAEKFIEEY 96

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSV-------QAMMKIIR 246
            +        K   +    ++  +++ F +   EK    V D  V       +   ++ +
Sbjct: 97  LKDMEALNVKKPTYQPKVTEHIPDIIEFIQNLIEKGYAYVIDGDVYFHVPAFEHYGELSK 156

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306
             L+ LN            HR +P   +  + + A               K+ ++ D+  
Sbjct: 157 QSLEELNR-----------HRIEPDERKRDVKDFA-------------LWKSAKEADLKA 192

Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY----FKCKYERGFDNMIYVMGSDHSG 362
           + +           D P  +    +    + ++            G  ++I+        
Sbjct: 193 QAVF----------DSPWGRGRPGWHIECSVMSAKYLGVPFDIHGGGKDLIF------PH 236

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422
           +        A    +  +I V        +      KMSK  G+ + +R V+     + +
Sbjct: 237 HENERAQSFARFGVEPVKIWVH-----NDFIRIKGEKMSKSLGNIVRIRDVLQRYEGEVL 291

Query: 423 RFMMLWRKNSELLDF 437
           R+ +L       LD+
Sbjct: 292 RYFLLTAHYRSPLDY 306


>gi|240047446|ref|YP_002960834.1| methionyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985018|emb|CAT05011.1| Methionyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 512

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 101/329 (30%), Gaps = 42/329 (12%)

Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG------AQINTLALSVFWRYQ 186
           +G +H+GH     +   + +     GY+       ++ G      AQ N L    F    
Sbjct: 16  SGNLHIGHLYTTTIAWVIKNYKKLQGYDARLLTGSDEHGQKIFQKAQENQLEPQFFVDQV 75

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----- 241
              + N  ++ E  Y   Y      +   +Y S++ +    K   I KD+          
Sbjct: 76  ANKFKNLWEIFEIDY--DYFSRTTSDFHKEYVSKIFDEMLAKGF-IFKDFYKGLYSVSDE 132

Query: 242 ------MKIIRDD--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293
                   I +DD     ++     +I E+ F          ++D         + I   
Sbjct: 133 EFLTPKQAIKKDDGYYHPVSGSKMEYIEEESFFFDMKKMQSWLLDFWKNH---PQFISEK 189

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN-- 351
                  K  +++       T    +   P+    G   Y   D  +      +  D   
Sbjct: 190 KIENELIKNFLEKGIENLSVTRTSLEWGIPVKSQPGHVIYVWLDALFNYISALKPLDKNS 249

Query: 352 -----------MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
                      +++V+G +    + R   +   +  +   + +    +   +      KM
Sbjct: 250 DFDTFWNQSEQIVHVVGKE----ITRFHCIYWPIFLQSLNLRLPSNIITHGWLITPEGKM 305

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
           SK  G+ +    ++ +   ++++     +
Sbjct: 306 SKSKGNVVDPLELIKKHDVETIKLFFASQ 334


>gi|227871837|ref|ZP_03990239.1| methionine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842338|gb|EEJ52566.1| methionine--tRNA ligase [Oribacterium sinus F0268]
          Length = 468

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 22/168 (13%)

Query: 352 MIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRL------------------- 391
           + Y +  +H    K+   A    + +   + + +   +  +                   
Sbjct: 23  IGYDVDGEHQERFKKYWPADLHLIGKDIVRFHTIYWPIFLMSLNVPLPKQVFGHPWLLTA 82

Query: 392 -YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-SELLDFDFCKVKEQSKEN 449
             +     KMSK  G+ I    +V   G D+VRF ++            +  + E+    
Sbjct: 83  TAKSDEGTKMSKSRGNVIYADDLVRLFGVDAVRFFVMHEMPFENDGVISWELMVERFNSQ 142

Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497
               +     R  S+  +  D   +      P +   + +  + ++L 
Sbjct: 143 LANILGNLVKRTISMSNKYFDGIVEDKGVTEPVDQDLKNTVLEQAKLA 190


>gi|146321108|ref|YP_001200819.1| methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751976|ref|YP_003025117.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
 gi|145691914|gb|ABP92419.1| Methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816265|emb|CAZ51893.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
          Length = 667

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 111/333 (33%), Gaps = 45/333 (13%)

Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191
           P+G +H+G     +  D LA      G+EV     +++ G +I   A       Q  +  
Sbjct: 15  PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAKEAGLTPQAYVDG 74

Query: 192 NDSDLPE--GYYPGVYLK------HVGKELADKYSSELLNFPE------EKWLPIVKD-- 235
               + E        Y K         +E+      +LL   +        W  +  +  
Sbjct: 75  MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134

Query: 236 YSVQAMMKIIRDDLKAL------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE- 288
           ++   + ++ RD+   +      +     ++SE+ +          +++         + 
Sbjct: 135 FTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQP 194

Query: 289 -----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY--- 340
                 I+        +   + R    +   +  +      +  D    Y  A L Y   
Sbjct: 195 AGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALLNYATA-LGYGQE 253

Query: 341 FKCKYERGFDNMIY-VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395
               Y++ ++  +Y ++G D    HS Y      +   +  K     V     V   +DG
Sbjct: 254 ETVNYDKFWNGTVYHMVGKDILRFHSIY---WPIMLMMLDMKLPDRLVAHGWFVM--KDG 308

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
              KMSK  G+ +    +V+  G D +R+ ++ 
Sbjct: 309 ---KMSKSKGNVVYPEMLVERFGLDPLRYYLMR 338


>gi|78065216|ref|YP_367985.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123729057|sp|Q39JM5|SYL_BURS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77965961|gb|ABB07341.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 864

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTQEDSQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y  
Sbjct: 71  YNT 73


>gi|22474523|dbj|BAC10608.1| leucyl-tRNA synthetase [Thermococcus kodakaraensis]
          Length = 967

 Score = 39.1 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 59/204 (28%), Gaps = 29/204 (14%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N        +K      V   E  R    K  K  I       +G +HVGH R   + D
Sbjct: 4   LNFKAIEEKWQKRWMEARV--FEPDRKAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPD 61

Query: 149 TLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            +A      GY V     ++I   GA I  +A  +  R  + +           Y  VY 
Sbjct: 62  VIARFKRMQGYNVLFPMGWHI--TGAPIVGIAERIKNRDPKTI---------HIYRDVYK 110

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                         L  F + K   IVK +   A    IR      ++            
Sbjct: 111 VPE---------EILWKFEDPK--EIVKYFMKAAKETFIR---AGFSVDWTREFHTTSLF 156

Query: 267 RGDPSPIRDIIDNLARQGYVYEGI 290
                 I      L   G V +G 
Sbjct: 157 PPFSKFIEWQFWTLKDMGLVVKGA 180


>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 476

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 63/318 (19%), Positives = 107/318 (33%), Gaps = 43/318 (13%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
            H+G+ R  VV D +   +A+ GYEVT      D   +I           ++A   N   
Sbjct: 37  FHLGNARMLVVFDMVRRYLAYKGYEVTYVQNFTDVDDKI----------IKRASEENCEP 86

Query: 196 LP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK---A 251
           L   G Y   Y K              LN       P   D+ ++ M++II+   K   A
Sbjct: 87  LALAGRYIEEYYKDANA----------LNIQPATVHPKATDH-IKEMIEIIKGLEKKGLA 135

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             ++ D++ + + F +      R++ D       +  G       K     D     L  
Sbjct: 136 YPVEGDVYFAVEHFPQYGRLSGRNLED-------LQAGARVEIDDKKLNPMDF---ALWK 185

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AV 370
           ++         P    DG   +     A         FD    + G          E  +
Sbjct: 186 KAKPGEPAWPSPW--GDGRPGWHIECSAMALKYLGPNFD----IHGGGGDLVFPHHENEI 239

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           A +      +       +   +      KMSK  G+F  +R ++ +   + VRF +L   
Sbjct: 240 AQSEGYLDGE-QFARYWMHNAFITVNQEKMSKSLGNFFMIRDILKKFPGEVVRFYLLGTH 298

Query: 431 NSELLDFDFCKVKEQSKE 448
               LDFD  K++  ++ 
Sbjct: 299 YRSPLDFDDEKLEMAARG 316


>gi|16273191|ref|NP_439429.1| methionyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581399|ref|ZP_05849213.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174532|sp|P43828|SYM_HAEIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1574731|gb|AAC22924.1| methionyl-tRNA synthetase (metG) [Haemophilus influenzae Rd KW20]
 gi|260091941|gb|EEW75890.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 682

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390
           Y +   D+ YF                  HS +     A+      +K   NV     V 
Sbjct: 289 YHFIGKDIVYF------------------HSLF---WPAMLEGSGYRKPT-NVFAHGYVT 326

Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450
           +  DG   KMSK  G FI     ++ +  + +R+    + N  + D DF       + N 
Sbjct: 327 V--DGA--KMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNT 382


>gi|332981278|ref|YP_004462719.1| glutamyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332698956|gb|AEE95897.1| glutamyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 489

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 93/289 (32%), Gaps = 40/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA----QINTLALSVFWR 184
           + +PTG +H+G  R A+     A     +G  + R     D G      +  +  S+ W 
Sbjct: 9   APSPTGYLHIGGARTALFNWLFAR--HNNGRFILRIE-DTDRGRLKADSVEQIISSMKWL 65

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244
                   D     G   G Y +    +L  K    LL+  +  +    ++   Q   + 
Sbjct: 66  GLDWDEGPDV----GGDYGPYFQSQRLDLYSKEIRRLLDEDKAYYCYCTQEELEQRRQQA 121

Query: 245 IRDDLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           I++   +       ++ + E                +L +QG      L  P    T   
Sbjct: 122 IKEGKASRYDGRCRNLAVGEQQ--------------SLQKQGRKPVVRLKVPSEGVTVVE 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F + ++ D +   + KSDG  TY   +       +     ++I     +H  
Sbjct: 168 DVIRGTVTFDNALLDDFI---IQKSDGMPTY---NFVCAVDDHAMEISHVIR--AEEHLS 219

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   V  A+              V +       K+SKR G      
Sbjct: 220 NTPKQLLVYQALGYDAPVFAH-----VPMILAPDRSKLSKRHGATSVEE 263


>gi|221213180|ref|ZP_03586155.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221166632|gb|EED99103.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 864

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
                    +     +    K     +  +   P+G +H+GH R   + D +   +  +G
Sbjct: 12  AAAQGDWRAADAYKTQEDAQKPKFYCVSML-PYPSGKLHMGHVRNYTINDVMYRYLRMNG 70

Query: 159 YEV 161
           Y V
Sbjct: 71  YNV 73


>gi|163802868|ref|ZP_02196757.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173408|gb|EDP58231.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 686

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 64/215 (29%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 194 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYV 253

Query: 303 DMDRKQLLFRS------TMVGDDVDRPLLK--SDGSYTYFAADLAYFKCKYERGFDNMIY 354
            +D       S         G D D    K  S   Y +   D+ YF             
Sbjct: 254 WLDAPVGYMASFKNLCNKTDGLDFDEYWKKDSSAELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G F+     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKASTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  + +R+    + NS + D D        + N
Sbjct: 348 NHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 382


>gi|154322417|ref|XP_001560523.1| hypothetical protein BC1G_00551 [Botryotinia fuckeliana B05.10]
 gi|150847885|gb|EDN23078.1| hypothetical protein BC1G_00551 [Botryotinia fuckeliana B05.10]
          Length = 134

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           L   +  K  ++      +      G+   +   F    P+G +H+GH R   + D LA 
Sbjct: 11  LDQKWRAKWTATEKPKSAKDKEQDEGQKMYILPMF--PYPSGDLHLGHFRAYTISDVLAR 68

Query: 153 LMAFSGYEVT 162
                GY V 
Sbjct: 69  FHTMKGYNVV 78


>gi|225849502|ref|YP_002729667.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643602|gb|ACN98652.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 607

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
           R+ L       I        K  K  +  +   P+G +H+GH R   +GD +      +G
Sbjct: 10  RQYLEKWEEEKIFKSVENNDKQNKYYVLEMFPYPSGKIHMGHVRNYAIGDVINRYYRMTG 69

Query: 159 YEV 161
              
Sbjct: 70  KNT 72


>gi|167761243|ref|ZP_02433370.1| hypothetical protein CLOSCI_03648 [Clostridium scindens ATCC 35704]
 gi|167660909|gb|EDS05039.1| hypothetical protein CLOSCI_03648 [Clostridium scindens ATCC 35704]
          Length = 850

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 329 GSYTYFAADLAYFKCKY---ERGFDNMI----YVMGSDHS-GYV------KRLEAVAAAV 374
           GS  YF   +     K        D M+    Y+ G +H+  ++       +      A+
Sbjct: 545 GSSWYFLRYVDNHNDKELVSREKADEMLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAI 604

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
              +   + L  + +   ++G  IKMSK  G+ ++   +V + G DS+R   L+    E 
Sbjct: 605 DFDEP-FHKLFNQGMITGKNG--IKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPE- 660

Query: 435 LDFDFCK 441
           LD ++  
Sbjct: 661 LDAEWDD 667


>gi|73540536|ref|YP_295056.1| glutaminyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|72117949|gb|AAZ60212.1| glutaminyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 609

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 31/177 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           ++LR I+   + +G   GR     +     I      P G +H+GH +   +   LA   
Sbjct: 42  NFLRSIIDQDLAAGTYAGRQDSQGEPLPTVITRFPPEPNGYLHIGHAKSICLNFGLARDY 101

Query: 153 ----LMAFSGYEVTREY--YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
                + F      +E   Y+       +++  +V W             P  +Y   Y 
Sbjct: 102 GGRCHLRFDDTNPVKEDTEYV-------DSIIDAVHWLGFSWDSKTPGGQPHLHYASDYF 154

Query: 207 ---------------KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
                           +V  + A++ ++   NF E       +D SV+  +++ RD 
Sbjct: 155 DQLYAFAEKLIERGAAYVDSQSAEQIAANRGNFSEPGKPSPFRDRSVEENLQLFRDM 211


>gi|302332798|gb|ADL22991.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 917

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 73/226 (32%), Gaps = 37/226 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +  + EG   P     T   + D   + F S        R +L++             
Sbjct: 499 EAKELLPEGFTHPGSPNGTFTKETDIMDVWFDSGS----SHRGVLET------------- 541

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
              + E  F   +Y+ GSD   G+       A A         +L    V    DG   K
Sbjct: 542 ---RPELSFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVM---DGEGKK 595

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         Y 
Sbjct: 596 MSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVRIS-DEILKQTSD--------VYR 646

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           + R+  R       D + D         ESE    +  L+  L E+
Sbjct: 647 KIRNTLRFMLGNINDFNPDTDSVP----ESELLEVDRYLLNRLREF 688


>gi|284926291|gb|ADC28643.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 915

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|240169909|ref|ZP_04748568.1| methionyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 516

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 105/345 (30%), Gaps = 41/345 (11%)

Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG- 171
            + L        I + +A P    HVGH    +  D +A      G++V      ++ G 
Sbjct: 1   MKPLQPYYVTTAIAYPNAAP----HVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGL 56

Query: 172 -------------AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218
                        AQ+      VF R Q+AL  +         P  Y          + +
Sbjct: 57  KVAQAAAAAGVPTAQLARRNSDVFQRMQEALNISFDRFIRTTDPDHYAASQEIWRRMEAA 116

Query: 219 SELLNFPEEKWLPIVKD-YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277
            +L       W  +  + + V++  +++     A+     +  +E+  +    S      
Sbjct: 117 GDLYLDNYSGWYSVRDERFFVESETQLVDGTRIAIETGTPVTWTEEQTYFFRLSAYA--- 173

Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL---------LKSD 328
           D L    + +   + P   +      +         +    +   P+         +  D
Sbjct: 174 DKLLAHYHAHPDFIAPEVRRNEVISFVSGGLKDLSVSRTSFNWGVPVPEHPDHVMYVWVD 233

Query: 329 GSYTYFA----ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384
               Y       D      +     D  ++++G D    + R  AV        A I + 
Sbjct: 234 ALTNYLTGAGYPDTGSESFRRYWPAD--LHMIGKD----IIRFHAVYWPAFLMSAGIELP 287

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
                  +      KMSK  G+ I    ++   G D VR+ +L  
Sbjct: 288 RKVFAHGFLHNRGEKMSKSVGNVIDPVALIQAYGVDQVRYFLLRE 332


>gi|256371124|ref|YP_003108948.1| aminoacyl-tRNA synthetase class Ia [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256007708|gb|ACU53275.1| aminoacyl-tRNA synthetase class Ia [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 855

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 26/170 (15%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ +T   +V+  G+D+VR      +       D  +++   +      
Sbjct: 570 DPDRKKMSKSKGNVVTPMPLVERFGADAVRHWAANGRPGTDTAADEAQMRVGRR----LA 625

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
           ++ A A   ++ R A              +  P     D +EL+           I  AT
Sbjct: 626 IKVANASRFALSRVA-----------SRSSHKPAWVPIDAAELE------ALDATIARAT 668

Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA--NNRKLTMMRLQ 561
              E +    Y   LA++    W+   +   L  V+A  ++       L 
Sbjct: 669 ELLEAH---DYTSALAAIEEHFWAFCDDYLELVKVRAYGDDSPEHASALA 715


>gi|254464224|ref|ZP_05077635.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685132|gb|EDZ45614.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 1023

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 363 YVKRLEAVAAAVSEK----KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418
           +V R+  +  AV ++    K +I      L  L RD    KMSK  G+ +    +++E G
Sbjct: 627 WVARMMMMQLAVLDENLPVKERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIEEFG 686

Query: 419 SDSVRF 424
           +D++RF
Sbjct: 687 ADALRF 692



 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 72/262 (27%), Gaps = 50/262 (19%)

Query: 92  YLSPSYLRKILSSIVVSGIEY--GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
             + +     L         +  G N   + +   I     N TG +H+GH     + D 
Sbjct: 6   TFNAAEAESRLYKAWEEAGCFKAGANAKPEASTYCIMIPPPNVTGVLHMGHAFNNTLQDI 65

Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209
           L       GY+   +   + AG     +                               V
Sbjct: 66  LIRWKRMQGYDTLWQPGTDHAGIATQMV-------------------------------V 94

Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF---- 265
            +ELA            EK+L  V ++  ++    I + LK L    D   +        
Sbjct: 95  ERELAKTQQPSRRELGREKFLEKVWEWKEKSG-GTIVEQLKRLGASCDFSRTAFTMAGAQ 153

Query: 266 ------HRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
                 H   P     +  +   +  +G +Y G          +    D +         
Sbjct: 154 GDTRVGHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGH 213

Query: 317 GDDVDRPLLKSDG-SYTYFAAD 337
                 PL  ++G +YTY   D
Sbjct: 214 MWHFKYPL--ANGATYTYVEKD 233


>gi|165919091|ref|ZP_02219177.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917225|gb|EDR35829.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 819

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           P+ + ++          +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PTLIEQLAQEYWEENETFEVKEDLSREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQ 66

Query: 153 ------LMAFSGYEVTR 163
                 ++   G++   
Sbjct: 67  IHKGRNVLQPMGWDAFG 83


>gi|148926033|ref|ZP_01809719.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845512|gb|EDK22604.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 920

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 570 YLEGSDQHRGWFQSSLLVGTAINESTPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 626

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 627 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 677

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 678 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 719

Query: 533 H 533
            
Sbjct: 720 S 720


>gi|153207783|ref|ZP_01946383.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218820|ref|YP_002305607.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064864|sp|B6J863|SYL_COXB1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120576335|gb|EAX32959.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013082|gb|ACJ20462.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 820

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS-- 152
           P+ + ++          +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PTLIEQLAQEYWEENETFEVKEDLSREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQ 66

Query: 153 ------LMAFSGYEVTR 163
                 ++   G++   
Sbjct: 67  IHKGRNVLQPMGWDAFG 83


>gi|33152252|ref|NP_873605.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|48428533|sp|Q7VM66|SYL_HAEDU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33148474|gb|AAP95994.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 861

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPSAIESKVQHFWEENKVFKAVKDITKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRMIGKNV 73


>gi|15669196|ref|NP_248001.1| valyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501068|sp|Q58413|SYV_METJA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1591666|gb|AAB99009.1| valyl-tRNA synthetase (valS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 878

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432
           A++ KK    +++  +V    DG   KMSK  G+ +    ++ + G+D++R         
Sbjct: 504 ALTGKKPWDEIVINGMV-FGEDG--HKMSKSRGNVVEPDEIIAKYGADALRLWASNSVVG 560

Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492
           + + F + +            V Y Y   R  +   +     +  D+      P E   +
Sbjct: 561 DDVQFLWKE------------VDYGYRFLRKSWNACRFAKMHISDDIIDELKKPME-ISN 607

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552
             +L ++  L      ++          +   +Y    V+H    +  E  + R    + 
Sbjct: 608 PIDLWILSKLQRLIERVDKDLENYRFNTIVE-IYKF--VWHEFCDNYIEMVKYRLYGDDE 664

Query: 553 RKLTMMRLQLVHAVASIIN 571
                 R  L + +  ++ 
Sbjct: 665 EAKKEARWTLYYVIDKVVR 683


>gi|116670947|ref|YP_831880.1| valyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611056|gb|ABK03780.1| valyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 873

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 33/190 (17%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           D    KMSK  G+ I    V++E GSD+VR+     K      ++  ++K          
Sbjct: 589 DPDRKKMSKSKGNVIVPTDVLNEYGSDAVRYWAASAKLGADTAYEIAQMKIGR------- 641

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513
                 R       A     +L                +  +  +   LA+   V+  AT
Sbjct: 642 ------RLAIKLLNASKFVLNLGATENSVVSADLSVLTNPLDRAV---LAQLSDVVAQAT 692

Query: 514 IAQEPYKLAFY----LYDLASVFHGHW---SHGRENPRLRFVQANNRKLTMMRLQLVHAV 566
            A        Y       ++  F   W       E  + R   A         L    A+
Sbjct: 693 KAFG-----NYDYARALQISESF--FWQFTDDYVELIKDRAYGAAGEAEQASVLA---AL 742

Query: 567 ASIINSGLNI 576
           A+ +++ L +
Sbjct: 743 ATTLDTLLRL 752


>gi|313157310|gb|EFR56735.1| valine--tRNA ligase [Alistipes sp. HGB5]
          Length = 875

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 62/265 (23%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           SP  +        +       +   +     I     N TG +H+GH     + D L   
Sbjct: 8   SPQEIESKWYDYWIEK-RLFHSEPDQREPYTIVIPPPNVTGMLHMGHMLNNTLQDVLVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
              SG               ++  +++   +    L+    +  +             E 
Sbjct: 67  ARMSGRNAC-------WVPGMDHASIATEAKVVAMLHEKGIE--KSSLSREKFLEYAWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            +KY   +L                          L+ L    D    E      D    
Sbjct: 118 KEKYGGMILKQ------------------------LRKLGASCD---WERTCFTMDGPRT 150

Query: 274 RDIID---NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             +I    +L  +G +Y G+          K  +  ++++F+ +                
Sbjct: 151 ESVIKVFCDLFEKGRIYRGVRMVNWD-PAAKTALSDEEVVFKESH--------------- 194

Query: 331 YTYFAADLAYFKCKYERGFDNMIYV 355
                  L Y + K E G D  I V
Sbjct: 195 -----GKLYYLRYKIE-GTDKAIIV 213


>gi|227891227|ref|ZP_04009032.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867101|gb|EEJ74522.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 470

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 100/329 (30%), Gaps = 30/329 (9%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +  +       KV +          +H+G+ R AV  DT+   + + G+EV    Y+++ 
Sbjct: 11  QKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFEV---NYVSNF 67

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
               + +      +  Q +  +  ++ E +    Y       +     +  +    +  +
Sbjct: 68  TDVDDKII-----KASQEMNLSVKEITEKFINAFYEDTSALNVKKATLNPRVMDNMDDII 122

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++    +          ++    +       D+ +     I D+      QG      
Sbjct: 123 KFIEVLVQKGYA------YESAGDVYYKTRKFKDYGKLSGQLIDDL-----EQG----AS 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                    +K D     L  ++       D P     G   +    +       +   D
Sbjct: 168 SRVDDIDQDKKQDPLDFALWKKAKQGEISWDSPW--GQGRPGWH---IECSVMSTKYLGD 222

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I +            E  +A + ++   +          +       KMSK  G+F+T
Sbjct: 223 T-IDIHAGGQDLEFPHHENEIAQSEAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVT 281

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           +  ++ EV    +RF M   +    + + 
Sbjct: 282 VHDLLKEVNPQVIRFFMSTTQYRRPIRYS 310


>gi|189467740|ref|ZP_03016525.1| hypothetical protein BACINT_04132 [Bacteroides intestinalis DSM
           17393]
 gi|189436004|gb|EDV04989.1| hypothetical protein BACINT_04132 [Bacteroides intestinalis DSM
           17393]
          Length = 876

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 64/255 (25%), Gaps = 43/255 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +   +   +         I     N TG +H+GH     + D L   
Sbjct: 8   NPADVEGKWYQYWLD-HKLFSSKPDGREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                +  +++   +    L               +LKH   E 
Sbjct: 67  ARMEGKNAC-------WVPGTDHASIATEAKVVNKLAAQGIK-KTDLTRDEFLKH-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D++                          II   L+ L    D   +           +
Sbjct: 118 TDEHG------------------------GIILKQLRKLGASCDWDRTAFTMDEKRSESV 153

Query: 274 RDIIDNLARQGYVYEGI---------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
             +  +L  +G +Y G+         L     +     +   K    R  + GD   R  
Sbjct: 154 LKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDAEGRYA 213

Query: 325 LKSDGSYTYFAADLA 339
           + +         D A
Sbjct: 214 VVATTRPETIMGDTA 228


>gi|189465798|ref|ZP_03014583.1| hypothetical protein BACINT_02160 [Bacteroides intestinalis DSM
           17393]
 gi|189434062|gb|EDV03047.1| hypothetical protein BACINT_02160 [Bacteroides intestinalis DSM
           17393]
          Length = 1141

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A+ V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 649 GVDQTRGWFFTLHAIASMVFDTISYKAVISNGLV---LDKNGNKMSKRLGNGVDPFSTIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   +  + L FD   ++E  ++
Sbjct: 706 KYGSDPLRWYMITNSSPWDNLKFDVDGIEEVRRK 739


>gi|167855810|ref|ZP_02478563.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853089|gb|EDS24350.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 861

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPSAIEPKVQQYWAENKVFKAIKDESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRY 65

Query: 154 MAFSGYEV 161
              +G  V
Sbjct: 66  QRMNGKNV 73


>gi|224539866|ref|ZP_03680405.1| hypothetical protein BACCELL_04776 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518515|gb|EEF87620.1| hypothetical protein BACCELL_04776 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1141

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A+ V +  +   V+   LV    D    KMSKR G+ +     ++
Sbjct: 649 GVDQTRGWFFTLHAIASMVFDTISYKAVISNGLV---LDKNGNKMSKRLGNGVDPFSTIE 705

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448
           + GSD +R+ M+   +  + L FD   ++E  ++
Sbjct: 706 KYGSDPLRWYMITNSSPWDNLKFDVDGIEEVRRK 739


>gi|119385062|ref|YP_916118.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119374829|gb|ABL70422.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 1030

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+   +     +    AV   V  +   ++        L RD    KMSK  G+
Sbjct: 642 TGFD-IIFFWVAR---MMMMQLAVVGQVPFRTVYVH-------GLVRDEKGAKMSKSKGN 690

Query: 407 FITLRHVVDEVGSDSVRFMMLW 428
            I    ++DE G+D++RF +  
Sbjct: 691 VIDPLTLIDEYGADALRFTLTS 712


>gi|84029518|sp|Q5HB43|SYI_EHRRW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1117

 Score = 39.1 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 34/205 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP--TGPMHVGHCRCAVVGDTLA 151
             S + + +         + +++  +  K    F    P   G  H GH     + DT+A
Sbjct: 26  DFSLIEEQILEFWKENNIFKKSIENRDEKRRFIFYDGPPFANGLPHYGHLLTGFIKDTVA 85

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+ V R +  +  G     LA        +        L         ++  G 
Sbjct: 86  RYKTMAGFRVDRRFGWDCHGLPAEMLA--------EKELGVSGKLA--------IEKFGI 129

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y    +     +W   +     Q+      +D K +N+     I    +      
Sbjct: 130 EKFNNYCRNSVMKFSREWKQYIDR---QSRWVDFENDYKTMNLSFMESIMWSFYQ----- 181

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
                   L ++G +YE I   P S
Sbjct: 182 --------LWQKGLIYESIKIVPYS 198


>gi|319651920|ref|ZP_08006043.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396412|gb|EFV77127.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 805

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   V     +     L  + + L  +    KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDVGIVHTKEPFQKLFNQGMILGEN--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V   G+D++R
Sbjct: 584 VVNPDEIVASHGADTLR 600


>gi|269102010|ref|ZP_06154707.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161908|gb|EEZ40404.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 858

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQDIEQKVQEHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEVT 162
              G  V 
Sbjct: 67  RLQGKNVM 74


>gi|284173399|ref|ZP_06387368.1| glutamyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261601709|gb|ACX91312.1| glutamyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 574

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 9/108 (8%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYIN 168
             +       +   + NP GP+H+G+ R A++    A       ++ F   +   +  I 
Sbjct: 92  PPLPNVKGQVVTRFAPNPDGPLHLGNARSAILSYEYAKMYNGKFILRFDDTDPKVKRPIL 151

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGKELAD 215
           DA   I      +  +++Q LY   S+  E YY    YL   G    D
Sbjct: 152 DAYDWIKEDLKWLGIKWEQELYA--SERLELYYKYARYLIEKGYAYVD 197


>gi|229815148|ref|ZP_04445485.1| hypothetical protein COLINT_02194 [Collinsella intestinalis DSM
           13280]
 gi|229809378|gb|EEP45143.1| hypothetical protein COLINT_02194 [Collinsella intestinalis DSM
           13280]
          Length = 905

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW-RKNSELL 435
            +   + ++     L +DG   +MSK  G+ +    ++D  G+D++R+ +L     ++ +
Sbjct: 508 DEVPFHDVVIYPTILAKDG--SRMSKSKGNGVNPMDLIDMYGADAMRYNLLTLCTTNQDV 565

Query: 436 DFDFCKVKE 444
            FD    K+
Sbjct: 566 KFDADIDKK 574


>gi|157415322|ref|YP_001482578.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386286|gb|ABV52601.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747963|gb|ADN91233.1| Isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932197|gb|EFV11140.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 917

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|58417799|emb|CAI27003.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1124

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 34/205 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP--TGPMHVGHCRCAVVGDTLA 151
             S + + +         + +++  +  K    F    P   G  H GH     + DT+A
Sbjct: 33  DFSLIEEQILEFWKENNIFKKSIENRDEKRRFIFYDGPPFANGLPHYGHLLTGFIKDTVA 92

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+ V R +  +  G     LA        +        L         ++  G 
Sbjct: 93  RYKTMAGFRVDRRFGWDCHGLPAEMLA--------EKELGVSGKLA--------IEKFGI 136

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y    +     +W   +     Q+      +D K +N+     I    +      
Sbjct: 137 EKFNNYCRNSVMKFSREWKQYIDR---QSRWVDFENDYKTMNLSFMESIMWSFYQ----- 188

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
                   L ++G +YE I   P S
Sbjct: 189 --------LWQKGLIYESIKIVPYS 205


>gi|57239215|ref|YP_180351.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|161598454|ref|YP_197385.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161294|emb|CAH58215.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1104

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 34/205 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP--TGPMHVGHCRCAVVGDTLA 151
             S + + +         + +++  +  K    F    P   G  H GH     + DT+A
Sbjct: 13  DFSLIEEQILEFWKENNIFKKSIENRDEKRRFIFYDGPPFANGLPHYGHLLTGFIKDTVA 72

Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211
                +G+ V R +  +  G     LA        +        L         ++  G 
Sbjct: 73  RYKTMAGFRVDRRFGWDCHGLPAEMLA--------EKELGVSGKLA--------IEKFGI 116

Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271
           E  + Y    +     +W   +     Q+      +D K +N+     I    +      
Sbjct: 117 EKFNNYCRNSVMKFSREWKQYIDR---QSRWVDFENDYKTMNLSFMESIMWSFYQ----- 168

Query: 272 PIRDIIDNLARQGYVYEGILPPPKS 296
                   L ++G +YE I   P S
Sbjct: 169 --------LWQKGLIYESIKIVPYS 185


>gi|75391303|sp|Q846V6|SYI_STAEP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29123080|gb|AAO65848.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
          Length = 871

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 69/228 (30%), Gaps = 37/228 (16%)

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
               +  + EG   P         + D   + F S        R +L++           
Sbjct: 497 EKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGS----SHRGVLET----------- 541

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
                + E  F   +Y  GSD   G+       A A   +     +L    V    DG  
Sbjct: 542 -----RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVM---DGEG 593

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
            KMSK  G+ I    VV + G+D  R  +        +      +K+ S           
Sbjct: 594 KKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLSDVRISDEILKKTSD---------V 644

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           Y + R+  R       D +    P      E+     +  L+  L E+
Sbjct: 645 YRKIRNTLRFMLGNINDFN----PETDSIAETNLLEVDRYLLNRLREF 688


>gi|312171717|emb|CBX79975.1| Leucyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 860

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEEIESHVQQHWDDKQTFKVIEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|298372880|ref|ZP_06982870.1| isoleucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275784|gb|EFI17335.1| isoleucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 512

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A++  +    A  NV+   LV    D    KMSKR G+ +     ++
Sbjct: 19  GVDQTRGWFFTLHAISTMIKGSVAFKNVISNGLV---LDKNGNKMSKRLGNAVDPFSTIE 75

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYA 457
             GSD +R +MM      + L FD   V+E  ++          F+  YA
Sbjct: 76  TFGSDPLRWYMMTNSSPWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYA 125


>gi|283956457|ref|ZP_06373937.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792177|gb|EFC30966.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 917

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTT---DEKGQKMSKSKGNVIAPEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 464

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 111/319 (34%), Gaps = 46/319 (14%)

Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195
           +H+G+ R  +V DT+   + + GY+V    Y+                  Q     +D  
Sbjct: 35  IHIGNARAFIVFDTVRRYLEYKGYKV---NYV------------------QNFTDIDDKL 73

Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
           +   +     +K +     ++Y  +  +   +     V   + + +  II    K ++  
Sbjct: 74  IKRSHEENTTVKELADRYIEEYFKDADSLGIK--RATVHPRATENIDDIINFVKKLIDKG 131

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----LLF 311
               ++ D ++                 G +    +   K+    + + D+K     +L+
Sbjct: 132 FAYVLNGDVYYDTT---------KFKEYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLW 182

Query: 312 RSTMVGDDV-DRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           ++   G+   D P  K    +    + ++  +  K          ++   H   + + EA
Sbjct: 183 KAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEA 242

Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429
              A   + A+  + +  L     +    KMSK   +F T+R +  +   + +RF ML  
Sbjct: 243 ANDA---EFARFWMHIGYL-----NINNEKMSKSKNNFFTVRDITSQYDPEVLRFFMLTS 294

Query: 430 KNSELLDFDFCKVKEQSKE 448
                ++F    +++    
Sbjct: 295 HYRNPINFSHDLLEQSKSG 313


>gi|157415073|ref|YP_001482329.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047114|sp|A8FLL5|SYC_CAMJ8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157386037|gb|ABV52352.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747715|gb|ADN90985.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932527|gb|EFV11462.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 462

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 101/304 (33%), Gaps = 47/304 (15%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILP 292
           +   +  +K   +D++ LN+    F      +    + + D+I  LA+ G+VY  E  + 
Sbjct: 82  EEITEFYIKSYEEDMRVLNVLDPDFKPRATHY---ITAMLDLIKKLAKDGFVYTLEDGIY 138

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDV------DRPLLKSD----------GSYTYFAA 336
              SK  +   +  + L    + + ++V      D  L K D          G   +   
Sbjct: 139 FDTSKDEKYLSLSNRNLEENISRLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTE 198

Query: 337 DLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +A     +E   D     I ++   H     +             ++  +      +  
Sbjct: 199 CVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCKR------KLANIWLHNGFVKI 252

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK   +   ++  + E   +++RF +L        ++    ++   K    FY
Sbjct: 253 DGE--KMSKSLNNSFFIKDALKEFMGEALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFY 310

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-----LQLIVHLAEYPRV 508
                       ++  D+    DFD+     I  E      E     L +   LA     
Sbjct: 311 ----------RLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISKALALLDDF 360

Query: 509 IENA 512
           I +A
Sbjct: 361 ISSA 364


>gi|156089121|ref|XP_001611967.1| valyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154799221|gb|EDO08399.1| valyl-tRNA synthetase, putative [Babesia bovis]
          Length = 972

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 53/200 (26%), Gaps = 35/200 (17%)

Query: 94  SPSYLRKILSSIVVSGIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
            P  + +       +   +  N         +        N TG +H+GH     + D L
Sbjct: 15  DPKAVEEGWYDWWKASGFFSPNASPESNAKGRWIALLPPPNVTGKLHIGHALTVSIQDCL 74

Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
           A      G         + AG       ++     ++ L   ++     +    ++K V 
Sbjct: 75  ARWHRMRGDVTLWIPGTDHAG-------IATQTVVERMLMQTENKTRHDFSREDFIKRV- 126

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
            +  D+Y +                         I+D L  +    D             
Sbjct: 127 FQWNDQYGNN------------------------IKDQLGRMGASLDWTRDAFTMDAPRS 162

Query: 271 SPIRDIIDNLARQGYVYEGI 290
             + +    +   G++Y   
Sbjct: 163 KAVIEAFVRMYNDGFIYRAT 182


>gi|57641396|ref|YP_183874.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|62296831|sp|Q8NKR7|SYL_PYRKO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57159720|dbj|BAD85650.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 967

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 59/204 (28%), Gaps = 29/204 (14%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148
           +N        +K      V   E  R    K  K  I       +G +HVGH R   + D
Sbjct: 4   LNFKAIEEKWQKRWMEARV--FEPDRKAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPD 61

Query: 149 TLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206
            +A      GY V     ++I   GA I  +A  +  R  + +           Y  VY 
Sbjct: 62  VIARFKRMQGYNVLFPMGWHI--TGAPIVGIAERIKNRDPKTI---------HIYRDVYK 110

Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266
                         L  F + K   IVK +   A    IR      ++            
Sbjct: 111 VPE---------EILWKFEDPK--EIVKYFMKAAKETFIR---AGFSVDWTREFHTTSLF 156

Query: 267 RGDPSPIRDIIDNLARQGYVYEGI 290
                 I      L   G V +G 
Sbjct: 157 PPFSKFIEWQFWTLKDMGLVVKGA 180


>gi|15897055|ref|NP_341660.1| glutamyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|2500979|sp|P95968|SYE_SULSO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|1707801|emb|CAA69558.1| glutamyl tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813224|gb|AAK40450.1| Glutamyl-tRNA synthetase (gltX) [Sulfolobus solfataricus P2]
          Length = 575

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 9/108 (8%)

Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYIN 168
             +       +   + NP GP+H+G+ R A++    A       ++ F   +   +  I 
Sbjct: 93  PPLPNVKGQVVTRFAPNPDGPLHLGNARSAILSYEYAKMYNGKFILRFDDTDPKVKRPIL 152

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV-YLKHVGKELAD 215
           DA   I      +  +++Q LY   S+  E YY    YL   G    D
Sbjct: 153 DAYDWIKEDLKWLGIKWEQELYA--SERLELYYKYARYLIEKGYAYVD 198


>gi|117928237|ref|YP_872788.1| isoleucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648700|gb|ABK52802.1| Isoleucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 1048

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 12/111 (10%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L AV   V  + +  NV+    + L  DG   KMSK  G+ +    +++  
Sbjct: 561 DQTRGWFYTLMAVGTLVFGRSSYRNVVCLGHI-LAEDGR--KMSKHLGNILEPMPLMERH 617

Query: 418 GSDSVRFMML--------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460
           G+D++R+ ML         R   + LD    KV         F+V YA A 
Sbjct: 618 GADALRWFMLASGSPWVPRRVGHDALDEVVRKVLLTYWNTASFFVLYANAS 668


>gi|332295167|ref|YP_004437090.1| glutamyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178270|gb|AEE13959.1| glutamyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 468

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 91/278 (32%), Gaps = 38/278 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G    A+     A  +   G  + R   I D        +        ++
Sbjct: 7   APSPTGALHIGGAHTALFNYLFARRLD--GKFILR---IEDTDT--ERSSKEYEAIILES 59

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     +  EG Y       + +E A++   + + +           +     +K  R+ 
Sbjct: 60  LKWLGIEWDEGPYYQSKRLDLYREKANELLKKGVAYEC---------FCTPEELKERREM 110

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
           +  +           D          +    L  +G      +  P+ K+  +  +  + 
Sbjct: 111 MVKMGRPPKYDGRCRDLS-------EEQKRELRAKGLKPALRIRIPEGKSFLRDAVKGEV 163

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRL 367
                ++ G   D  ++KSD   TY   + A      +    ++I   G DH +   K++
Sbjct: 164 SCSNDSLGG---DMVIMKSDNYPTY---NFAVVVDDIDMNITHVIR--GDDHLTNTFKQM 215

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
             +  A  +   +        + L       K+SKR G
Sbjct: 216 -IIYKAFGKDLPKFAH-----IPLLLGPDKTKLSKRHG 247


>gi|292487610|ref|YP_003530482.1| leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898849|ref|YP_003538218.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198697|emb|CBJ45806.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553029|emb|CBA20074.1| Leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 860

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEEIESHVQQHWDDKQTFKVIEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|154253446|ref|YP_001414270.1| valyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157396|gb|ABS64613.1| valyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 909

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 23/119 (19%)

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   ST+   D    L +      Y+  D+         GFD +I+         V R+
Sbjct: 484 GLWPFSTLGWPDKTPELAR------YYKTDV------LVTGFD-IIFFW-------VARM 523

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
             +     ++     V +  LV   RD    KMSK  G+ I    ++DE G+D++RF +
Sbjct: 524 MMMGLHFMQEVPFHTVYIHALV---RDEKGQKMSKTKGNVIDPLKLIDEYGADALRFTL 579


>gi|116492415|ref|YP_804150.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266121|sp|Q03GG4|SYL_PEDPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116102565|gb|ABJ67708.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 805

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +          +       KMSK  G+ +
Sbjct: 527 LYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKGNVV 586

Query: 409 TLRHVVDEVGSDSVR 423
               +V+  G+D++R
Sbjct: 587 NPDDIVERFGADTLR 601


>gi|56421377|ref|YP_148695.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|60390659|sp|Q5KW09|SYL_GEOKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56381219|dbj|BAD77127.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 805

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K     + +       +Y+ G++H+     Y +        +   
Sbjct: 495 GSCWYYLRYIDPHNDKQLADPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIV 554

Query: 378 KAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +     L  + + L  +    KMSK  G+ +    +++  G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIIESHGADTLR 600


>gi|13357972|ref|NP_078246.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762094|ref|YP_001752494.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920368|ref|ZP_02931698.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508502|ref|ZP_02958030.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701674|ref|ZP_02971372.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549554|sp|Q9PQ79|SYI_UREPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|11271209|pir||G82894 isoleucyl-tRNA synthetase UU410 [imported] - Ureaplasma urealyticum
 gi|6899398|gb|AAF30821.1|AE002138_8 isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827671|gb|ACA32933.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902796|gb|EDT49085.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675931|gb|EDT87836.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700922|gb|EDU19204.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 900

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 97/335 (28%), Gaps = 58/335 (17%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +   +   E+     D   + +II+ L  +G                   +  K L  
Sbjct: 461 WGVPIPMIFDENHNAIMDHELVENIINVLNEKG-------VNAWFDLDVNAFLTPKYLSM 513

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAV 370
           ++     + D   +  D   +Y           Y   +   +Y+ G D   G+       
Sbjct: 514 KNKTFYKEKDIMDVWFDSGSSYN------ILGHYNLNYPADVYLEGYDQYRGWFNSSLIT 567

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              ++ +     ++   +V    DG   KMSK  G+ +    V    G+D +R  +    
Sbjct: 568 GTILNNRAPYKYLVAHGMV---LDGEGYKMSKSKGNVVDPLDVCKIYGADVLRLWIANSD 624

Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490
                      +K+    N   Y +      +       D  P +DF     NV  +E  
Sbjct: 625 YQNDTRISEEILKQ----NAEIYRRIRNTLFKYSLSILNDFEPSVDFSF---NVRQEEQ- 676

Query: 491 FDTSELQLIVHLAEYPRV---IENATIAQEPYKLAFYLYDLASVFHGH--------WSHG 539
                      L E+  +   +  A           Y   +  +F+          + + 
Sbjct: 677 ---------FVLNEFNELHIKVIKAYENF------DY-QTVVKLFNKFILDLSSWYFENI 720

Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
           +++     +    RK          AV  I+ + L
Sbjct: 721 KDDMYCLAINDPIRKQIQS------AVYWILKNSL 749


>gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 465

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 63/410 (15%), Positives = 126/410 (30%), Gaps = 59/410 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V DT+   + + GY+V    Y+++     + L  +       
Sbjct: 29  CGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQ---YVSNFTDVDDKLIKAANEL--- 82

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                D       +   Y + V   L  K+++      E        D  ++ + +++  
Sbjct: 83  ---GEDVPTIADRFVEAYFEDV-TALGCKHATVHPRVTENM------DIIIEFIQELVNK 132

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A   + D++    +F        + I D       +  G       K     D    
Sbjct: 133 GY-AYESEGDVYFRTKEFEGYGKLSHQPIAD-------LRHGARIEVGEKKQDPLDF--- 181

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       + P  K    +    + +A    KY     + I +            
Sbjct: 182 ALWKDAKEGEIFWESPWGKGRPGWHIECSAMA---RKY---LGDTIDIHAGGQDLAFPHH 235

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A       +       +   Y +    KMSK  G+FI +  ++ +     +RF ML
Sbjct: 236 ENEIAQSEALTGK-TFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFML 294

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  ++F    +  QS  N +  ++ AY   +     + D                 
Sbjct: 295 SVHYRHPINFSEELL--QSTNNGLERIKTAYGNLKHRMESSTD----------------- 335

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIA--QEPYKLAFYLYDLASVFHGH 535
               D +E  L   L ++    E A          +   LY++A+  + +
Sbjct: 336 --LTDHNEKWLA-ELEKFQTAFEEAMNDDFNTANAITE-LYNVANHANQY 381


>gi|307204943|gb|EFN83482.1| Isoleucyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 1257

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSE 433
             KA    L+   + L  DG   KMSKR  ++     +V + G+D++R  ++      +E
Sbjct: 580 FGKAPFKNLVANGLVLASDGQ--KMSKRKKNYPDPIEIVTKYGADALRLYLINSPVVRAE 637

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYAR--CRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
            L F    V++  K+  VF   Y   R   ++I R  ++      FD      +  ++  
Sbjct: 638 NLRFKEEGVRDVIKD--VFLPWYNAFRFLMQNIERFEREEGTSFVFDDDAAAELRSDNIM 695

Query: 492 DTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLAS 530
           D   +     L  + +    A       P+ +  Y+ +L +
Sbjct: 696 DKWIVSFTQTLLLFMKQEMQAYRLYTVVPHLI-KYIDNLTN 735


>gi|159469444|ref|XP_001692873.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277675|gb|EDP03442.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 86

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P YL   L         +  +L        I     N TG +H+GH     + DT+    
Sbjct: 4   PVYLHACLYEWWEECGFFKPDLQSDKPPFVIVIPPPNVTGALHIGHALTNSIQDTITRWR 63

Query: 155 AFSGYEVT 162
             SGY   
Sbjct: 64  RMSGYNAV 71


>gi|156742292|ref|YP_001432421.1| glutamyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189082162|sp|A7NLL2|SYE_ROSCS RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|156233620|gb|ABU58403.1| glutamyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 507

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 95/295 (32%), Gaps = 46/295 (15%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG +H+G  R A+     A       ++     +  R Y    A    + L  S+ 
Sbjct: 13  APSPTGYLHIGGVRTALFNWLFARHYGGQFILRIEDTDEKR-YVPGSA----DDLMASLR 67

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           W   +     D   P   Y        G      Y   +    E     +   ++ +  +
Sbjct: 68  WVGIEWDEGPDIGGPHAPYVQSLRYEAGI-----YRPFVEQLLESGHAYL--SFTTEEEL 120

Query: 243 KIIRDDLKALNIQHDIFIS-EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +R + +A  ++   F   E D+         D    +A  G  Y   L  P    T  
Sbjct: 121 ERMRAEAQARGVKAFRFRGPERDWP-------LDRQREMAATGRPYTVRLKTPTEGVTAF 173

Query: 302 CDMDRKQ--LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
            D+ R    + F++  +    D  L+KS G   Y  A L       +     M +V+ SD
Sbjct: 174 RDLVRGGERIEFKNEEL---YDIVLVKSSGMPVYHLAHL------VDDHLMRMTHVLRSD 224

Query: 360 HSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +V           A          L   L +  R     K+SKR  D    R
Sbjct: 225 --EWVASTPYHVLLYQAFGWDPPAFAHLPPILRQDGRG----KLSKRTDDVAANR 273


>gi|301121120|ref|XP_002908287.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262103318|gb|EEY61370.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 3320

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 398  IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-DFDFCKV------KEQSKENP 450
            +KM+ R        ++  E   D++R+ M   K+  +  D    +       ++  K+ P
Sbjct: 2492 VKMASRNYGVYDFANLDRERNIDALRYRMFGSKSKTITGDIVMDRASRVLVFRDHDKDKP 2551

Query: 451  VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510
              Y+        +  R    + PD   +L            ++ EL+   H+  +   +E
Sbjct: 2552 PSYIL-EVKIIAARLRNEFSLKPDSTAELIAETDNHAARATESKELKTA-HVYRFDSDLE 2609

Query: 511  NATIAQEPYKLA--FY 524
             A  ++ P KL   FY
Sbjct: 2610 FACDSR-PKKLTLNFY 2624


>gi|72161027|ref|YP_288684.1| glutamyl-tRNA synthetase [Thermobifida fusca YX]
 gi|118595564|sp|Q47SA6|SYE_THEFY RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|71914759|gb|AAZ54661.1| glutamyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 477

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 102/300 (34%), Gaps = 44/300 (14%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG  HVG  R A+    LA L    G  V R   I D  A  N           +A
Sbjct: 11  APSPTGMFHVGGARSALFNWALA-LQQPEGKFVLR---IEDTDAARNR--PEWTEGILRA 64

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           L     D  + ++ G Y +      ADK+         E+     + Y      + I++ 
Sbjct: 65  LSALGIDERDPHFEGPYFQ---SAYADKHREV-----AEELYRKGRAYYCDCTREQIQER 116

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
               ++ +D +  +     G    +R           V EG       K   + + D   
Sbjct: 117 RGNPHLGYDGYCRDRGLEPGPGRALR---------FRVPEGGPTVVDDKIRGRVEFDHSA 167

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           +           D  + +SDGS  +    LA      E    ++  V G +H     + +
Sbjct: 168 I----------EDFVIARSDGSPLFV---LANVVDDVEMAITHV--VRGEEHLSNTPKQQ 212

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-EVGSDSVRFMML 427
            +  A+ +    +   L  +V   R     K+SKR        ++ +  +    V ++ML
Sbjct: 213 LLWEALGQTPP-VWAHLPVIVNEKR----QKLSKRRDKVALEDYLAEGYLPEAMVNYLML 267


>gi|15673845|ref|NP_268020.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537525|sp|Q9CEH8|SYI_LACLA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12724895|gb|AAK05961.1|AE006416_6 isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 932

 Score = 39.1 bits (90), Expect = 2.3,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 88/271 (32%), Gaps = 52/271 (19%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +      +  + EG   P         + D   + F S   G   +  L + D  Y  F
Sbjct: 491 KVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDS---GSSWNGVLNERD--YLSF 545

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            ADL               Y+ GSD   G+       + AV+       VL    V    
Sbjct: 546 PADL---------------YLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFV---L 587

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ I  + V  + G+D +R  +        +      + + S+      
Sbjct: 588 DGKGRKMSKSIGNTIVPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSE------ 641

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI--VHLAEYPRVIEN 511
               Y + R+  R       D +         P+E   D +EL+ +    L ++  +++ 
Sbjct: 642 ---VYRKIRNTLRFLIANTSDFN---------PKEDAIDFAELRPVDKYMLVKFNELVKQ 689

Query: 512 ---ATIAQEPYKLAFY--LYD-LASVFHGHW 536
              A        +  Y  + + + +     +
Sbjct: 690 IRTAYDNY--SFMTVYKSIINFITNDLSSFY 718


>gi|326407355|gb|ADZ64426.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 932

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 88/271 (32%), Gaps = 52/271 (19%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +      +  + EG   P         + D   + F S   G   +  L + D  Y  F
Sbjct: 491 KVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDS---GSSWNGVLNERD--YLSF 545

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            ADL               Y+ GSD   G+       + AV+       VL    V    
Sbjct: 546 PADL---------------YLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFV---L 587

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ I  + V  + G+D +R  +        +      + + S+      
Sbjct: 588 DGKGRKMSKSIGNTIVPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSE------ 641

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI--VHLAEYPRVIEN 511
               Y + R+  R       D +         P+E   D +EL+ +    L ++  +++ 
Sbjct: 642 ---VYRKIRNTLRFLIANTSDFN---------PKEDAIDFAELRPVDKYMLVKFNELVKQ 689

Query: 512 ---ATIAQEPYKLAFY--LYD-LASVFHGHW 536
              A        +  Y  + + + +     +
Sbjct: 690 IRTAYDNY--SFMTVYKSIINFITNDLSSFY 718


>gi|297529000|ref|YP_003670275.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252252|gb|ADI25698.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K     + +       +Y+ G++H+     Y +        +   
Sbjct: 495 GSCWYYLRYIDPHNDKQLADPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIV 554

Query: 378 KAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +     L  + + L  +    KMSK  G+ +    +++  G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIIESHGADTLR 600


>gi|261415146|ref|YP_003248829.1| glutamyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371602|gb|ACX74347.1| glutamyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327061|gb|ADL26262.1| glutamate--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 486

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 123/405 (30%), Gaps = 79/405 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG----AQINTLALSVFWR 184
           + +PTG +HVG  R A+     A      G          D        ++ L   + W 
Sbjct: 12  APSPTGYLHVGGARTAIYNYFFA---KHMGGTFYLRIEDTDRKRYNETALHDLMRDLKWL 68

Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK---YSSELLNFPEEKWLPIVKDYSVQAM 241
             Q       +   G Y       +      K          F  E+ L  V+    ++ 
Sbjct: 69  GLQWDEGPGCEGDCGPYFQSERLDIYHREIKKLLDAGCAYYCFCTEERLQEVRAEQEKSH 128

Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301
           + +   D    NI  +    E     G+ + IR                   P++  T+ 
Sbjct: 129 VPVTGYDRHCRNISREEA--EARIAAGEKAVIR----------------FKVPETGVTEF 170

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
            DM R  + +++ ++    D  L+K DG  TY     A     +  G  +++   G +  
Sbjct: 171 DDMIRGHISYQNELLD---DLVLIKRDGYPTYHF---ASVVDDHYMGTTHVLR--GDEWI 222

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG--DFITLRHV------ 413
               + E +  A   +     V     V L ++G   K+SKR G       R +      
Sbjct: 223 SSTPKHELLYKAFGWQPP---VWCHLPVILDKNGG--KLSKRKGAASVGDFRDLGYLPET 277

Query: 414 --------------VDEVG--SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457
                           EV    + +    L R N +   FD  K++  + +         
Sbjct: 278 LVNYLALLGWNPGDDREVMSVKEMIDCFSLERINPKSASFDEKKLQWMNGQ--------- 328

Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
           +               D+  D      +   +E +   L+++  L
Sbjct: 329 HIHMCD-----DAFLKDIMVDGLKAMGVDTSAEPNERLLEIVKQL 368


>gi|240047649|ref|YP_002961037.1| isoleucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985221|emb|CAT05234.1| Isoleucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 885

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 112/314 (35%), Gaps = 34/314 (10%)

Query: 159 YEVTREYYINDAGA---QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
           + +    ++ND G    Q +  A ++F+           +         ++KH       
Sbjct: 339 FNLEMIMHVNDDGTFNEQADQFA-NLFYEDANKQIGQFLEEKNSLLHLSFIKHSFPHDWR 397

Query: 216 KYSSELLNFPEEKWL---PIVKDYSVQAMM------KIIRDDLKALNIQHDIFISEDDFH 266
            +   +      +W      +K   ++ +         +++ L+ +      +I      
Sbjct: 398 THKPVIYRGT-PQWFISVEKIKQGILKEIQSIDFPEHWLKNRLEKMIEGRKDWIISRQRS 456

Query: 267 RGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320
            G P  I      + ++D LA   +V   I         Q    +     FR+     ++
Sbjct: 457 WGVPLIIFYDEKGKPVLDKLALFDHVIYLIEKHGSDIWYQWSTDELLPEQFRNRNWTKEL 516

Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKA 379
           D   +  D   ++ AAD+       +  FD  +Y+ GSD   G+       +    +K  
Sbjct: 517 DILDVWYDSGSSFLAADI----DGEKSPFD--LYLEGSDQYRGWFNSSLINSYIYQQKSP 570

Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439
              +L    V    D    KMSK  G+ I+   ++D+ G+D +R   LW  NSE  + D 
Sbjct: 571 YKKLLSHGFVV---DAKGNKMSKSKGNGISPLELIDKYGTDVLR---LWVANSEYFN-DV 623

Query: 440 CKVKEQSKENPVFY 453
              KE  ++N   Y
Sbjct: 624 VYSKEIFEQNVEIY 637


>gi|219871152|ref|YP_002475527.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691356|gb|ACL32579.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 862

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 7   NPSAIEPKVQQYWAENKVFKAIKDESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRY 66

Query: 154 MAFSGYEV 161
              +G  V
Sbjct: 67  QRMNGKNV 74


>gi|189485558|ref|YP_001956499.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287517|dbj|BAG14038.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 883

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 10/77 (12%)

Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             +IY+        V R+        +     NV +  +V   RD    KMSK  G+ + 
Sbjct: 490 HEIIYLW-------VARMVQFGLEFMKDVPYSNVFIHGIV---RDKNGKKMSKSLGNVVN 539

Query: 410 LRHVVDEVGSDSVRFMM 426
              ++D+ G+D++RF +
Sbjct: 540 PGDIMDKYGTDALRFAL 556


>gi|119025836|ref|YP_909681.1| helicase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765420|dbj|BAF39599.1| probable helicase [Bifidobacterium adolescentis ATCC 15703]
          Length = 882

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 24/194 (12%)

Query: 199 GYYPGVYLK------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           G  PG+Y            E       EL    E + +  + D  V+  +   ++DLKAL
Sbjct: 338 GILPGIYFIFSRNGCDQAVEQCINAGLELTTDDEVRRIRRIVDEMVEGQL--SQEDLKAL 395

Query: 253 NIQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +     F  E+ F   H G  +  R I++ L  +G V    +           +M  + +
Sbjct: 396 HFSQFRFALEEGFAPHHAGMVALFRQIVERLFEEGLV---KVVFATETLALGINMPARCV 452

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           +       D      L + G +T              RG D + + +  DH G++    A
Sbjct: 453 VVEKLEKFDGTGHVGL-TPGEFTQLTGRAG------RRGIDTIGHAVVVDHHGFIP---A 502

Query: 370 VAAAVSEKKAQINV 383
            AAA+S K+     
Sbjct: 503 TAAALSSKRVYPLH 516


>gi|254172881|ref|ZP_04879555.1| leucyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033037|gb|EEB73865.1| leucyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 965

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 61/200 (30%), Gaps = 30/200 (15%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +   + ++ L   V    E  RN   K  K  I       +G +HVGH R   + D +A 
Sbjct: 8   IEEKWQKRWLKERV---FEPDRNAKPKDKKFYITVAFPYLSGHLHVGHARTYTIPDVIAR 64

Query: 153 LMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210
                GY V     ++I   GA I  +A  +  R  + +           Y  VY     
Sbjct: 65  FKRMQGYNVLFPMAWHI--TGAPIVGIAERIKNRDPKTI---------HIYRDVYKVPE- 112

Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270
                     L  F + K   IVK +   A    IR      ++                
Sbjct: 113 --------DILWKFEDPK--EIVKYFMKAAKETFIR---AGFSVDWTREFHTTSLFPPFS 159

Query: 271 SPIRDIIDNLARQGYVYEGI 290
             I      L   G V +G 
Sbjct: 160 KFIEWQFWTLKDMGLVVKGA 179


>gi|150863806|ref|XP_001382407.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
 gi|149385062|gb|ABN64378.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
          Length = 584

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 12/84 (14%)

Query: 355 VMGSD----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410
           ++G D    H+ Y         A   +  +  ++    +         KMSK  G+ +  
Sbjct: 295 IVGKDIIKFHTIY---WPIFLLAAGIELPKQVIVHAHWLSDG-----FKMSKSLGNVVDP 346

Query: 411 RHVVDEVGSDSVRFMMLWRKNSEL 434
             +++  G D+VRF ++   N + 
Sbjct: 347 FDILEYYGEDAVRFFLMENSNIQD 370


>gi|1149664|emb|CAA60232.1| ileS [Clostridium perfringens]
          Length = 138

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-FDFCKVKE 444
           C ++    D   +KMSK  G+ +    V+D  G+D+ R+         L   F    V E
Sbjct: 39  CIVLGHVLDKKGLKMSKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAE 98

Query: 445 QSKEN-------PVFYVQYAYA 459
             +++         FYV YA  
Sbjct: 99  TQRKSLSTLWNVYSFYVLYAVL 120


>gi|25009290|sp|Q8KA47|SYE_BUCAP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|21622961|gb|AAM67635.1| glutamyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 474

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 98/283 (34%), Gaps = 56/283 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A             Y+    G  I  +  + F R+   
Sbjct: 8   APSPTGNLHIGSIRTALYSWLFAR-----------HYH----GKFILRIEDTDFERF--- 49

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               DS   E    G  LK +G           LN+ E  +    +    + ++K++ + 
Sbjct: 50  ----DSKSVESILYG--LKWLG-----------LNWDEGPYFQSKRLERYKEVIKMMLES 92

Query: 249 LKALNIQHDIFISEDD----FHRGDPSPIRDIIDNLARQGYV----YEGILPPPKSKTTQ 300
             A      +   ED+      +G       I  NL  + Y+    Y      P S    
Sbjct: 93  GNAYKCFCSVKELEDERIRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISGQVT 152

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  R ++ F++  +    D  + +S+G  TY   +        +    ++I   G DH
Sbjct: 153 FEDKIRGKITFQNEELD---DLVIQRSNGIPTY---NFCVVIDDLDMNITHVIR--GEDH 204

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
                R   +  +++ K     + +   V +  +    K SKR
Sbjct: 205 INNTPRQINILKSLNAK-----IPIYAHVSMIFNEDGHKFSKR 242


>gi|330813399|ref|YP_004357638.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486494|gb|AEA80899.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 854

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 51/163 (31%), Gaps = 41/163 (25%)

Query: 90  NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149
           N  ++             + I        K     +E     P+G +H+GH R   +GD 
Sbjct: 7   NHTVAEKKWHSFWEE---NKIFKAGEDKTKKKFYCLEMF-PYPSGKIHMGHVRNYTLGDV 62

Query: 150 LASLMAFSGYEVTR-----------EY-------YINDA--------GAQINTLALSVFW 183
           +A+    +G+ V             E        +  D          +Q+  L  S+ W
Sbjct: 63  VANFKRLNGFNVLHPMGWDSFGMPAENAAIQNKLHPKDWTNSNIQTMKSQLKLLGFSIDW 122

Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
             + +  N D           Y KH  K   D Y  +L+   E
Sbjct: 123 EREISTCNED-----------YYKHQQKFFLDLYKKDLVYKKE 154


>gi|298492550|ref|YP_003722727.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234468|gb|ADI65604.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 859

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 99  RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158
            K        G++       +     +      P+G +H+GH R   + D +A L    G
Sbjct: 16  EKWQKIWSELGLDKTPQYHNQPKFYALSMF-PYPSGRLHMGHVRNYTITDVIARLKRMQG 74

Query: 159 Y 159
           Y
Sbjct: 75  Y 75


>gi|261418142|ref|YP_003251824.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767898|ref|YP_004133399.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374599|gb|ACX77342.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112764|gb|ADU95256.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVSEK 377
           GS  Y+   +     K     + +       +Y+ G++H+     Y +        +   
Sbjct: 495 GSCWYYLRYIDPHNDKQLADPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIV 554

Query: 378 KAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             +     L  + + L  +    KMSK  G+ +    +++  G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIIESHGADTLR 600


>gi|114606513|ref|XP_001159912.1| PREDICTED: valyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 1254

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 63/222 (28%), Gaps = 38/222 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155
           +              EYG         + I     N TG +H+GH     + D+L     
Sbjct: 307 AAWYPWWEQQGFFKPEYGVTNPRGVFMMCI--PPPNVTGSLHLGHALTNAIQDSLTRWHR 364

Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215
             G         + AG     +     WR                  G+    +G+E   
Sbjct: 365 MRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE--- 405

Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275
            +  E+  + EEK   I                LK L    D   +         + + +
Sbjct: 406 AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAAVTE 452

Query: 276 IIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
               L  +G +Y        S T        ++D+K+L  R+
Sbjct: 453 AFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 494


>gi|332246066|ref|XP_003272171.1| PREDICTED: valyl-tRNA synthetase [Nomascus leucogenys]
          Length = 1264

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|194380412|dbj|BAG63973.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 12  AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 71

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 72  WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 115

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 116 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 159

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 160 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 204


>gi|171920908|ref|ZP_02932059.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178931|ref|ZP_02964692.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024125|ref|ZP_02996861.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518253|ref|ZP_03003782.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524387|ref|ZP_03004413.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273760|ref|ZP_03206294.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554454|ref|YP_002284847.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550591|ref|ZP_03771540.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551525|ref|ZP_03772471.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903125|gb|EDT49414.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209194|gb|EDU06237.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019182|gb|EDU57222.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998148|gb|EDU67245.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659998|gb|EDX53378.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249515|gb|EDY74297.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541955|gb|ACI60184.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379340|gb|EEH01705.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379745|gb|EEH02107.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 900

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 62/197 (31%), Gaps = 17/197 (8%)

Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
             +   +   E+     DP  + +II+ L  +G                   +  K L  
Sbjct: 461 WGVPIPMIFDENHEAIMDPDLVENIINVLNEKG-------VNAWFDLDVNAFLTPKYLSM 513

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAV 370
           ++     + D   +  D   +Y           Y   +   +Y+ G D   G+       
Sbjct: 514 KNKTFYKEKDIMDVWFDSGSSYN------VLQHYNLPYPADVYLEGYDQYRGWFNSSLIT 567

Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
              ++ K     ++   +V    DG   KMSK  G+ +    V    G+D +R  +    
Sbjct: 568 GTILNNKAPYKYLVAHGMV---LDGEGYKMSKSKGNVVDPLDVCKVYGADVLRLWIANSD 624

Query: 431 NSELLDFDFCKVKEQSK 447
                      +K+ ++
Sbjct: 625 YQNDTRISEEILKQNAE 641


>gi|123295742|emb|CAM26113.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1182

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 225 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 284

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 285 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 328

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 329 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 372

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 373 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 417


>gi|158522544|ref|YP_001530414.1| glutamyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|238686895|sp|A8ZWA3|SYE_DESOH RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|158511370|gb|ABW68337.1| glutamyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 467

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 96/296 (32%), Gaps = 53/296 (17%)

Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180
            K  I     +PTG +H+G  R A+     A     +G        I D    +      
Sbjct: 1   MKQIITRFPPSPTGHLHIGGARTALFNWLYAR---HTGGRFILR--IED--TDVERSTTQ 53

Query: 181 VFWRYQQALYNNDSDLPEGYYP-----GVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235
                 ++L     D  EG Y       VY +++ + LA  ++      PE      +K+
Sbjct: 54  SAEGIIKSLEWLGIDWDEGPYFQSRRMEVYAEYIQRLLASGHAYYCTCSPER-----LKE 108

Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295
              +A+ +         N  +D    E      D + +R                   P 
Sbjct: 109 RRERALAE-------GRNPTYDGTCREKALPPSDDAVVR----------------FRTPD 145

Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355
           +  T   D  +  + F +  +GD +   + +SD + TY   + A        G + +I  
Sbjct: 146 TGKTVLDDRVKGGIAFDNAEIGDFI---IQRSDQTPTY---NFAVVVDDITMGINTIIR- 198

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
            G DH     R   +  A+        + L   V +       ++SKR G    L 
Sbjct: 199 -GDDHVTNTPRQILMYRAL-----DSELPLFAHVPMVLGRDRSRLSKRHGAMSVLE 248


>gi|15215421|gb|AAH12808.1| Valyl-tRNA synthetase [Homo sapiens]
 gi|168985661|emb|CAQ10126.1| valyl-tRNA synthetase [Homo sapiens]
 gi|168985920|emb|CAQ07253.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1264

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|31545|emb|CAA41990.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1265

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|5454158|ref|NP_006286.1| valyl-tRNA synthetase [Homo sapiens]
 gi|12644177|sp|P26640|SYVC_HUMAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Protein G7a;
           AltName: Full=Valine--tRNA ligase; Short=ValRS
 gi|4529896|gb|AAD21819.1| G7A [Homo sapiens]
 gi|15277250|dbj|BAB63303.1| valyl tRNA synthetase [Homo sapiens]
 gi|55961424|emb|CAI18384.1| valyl-tRNA synthetase [Homo sapiens]
 gi|55961791|emb|CAI17732.1| valyl-tRNA synthetase [Homo sapiens]
 gi|55961915|emb|CAI18211.1| valyl-tRNA synthetase [Homo sapiens]
 gi|119623928|gb|EAX03523.1| valyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119623929|gb|EAX03524.1| valyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|168985308|emb|CAQ10624.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1264

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|27352779|dbj|BAC49781.1| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 658

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 27/248 (10%)

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           WR  +A  +  +D   G+Y      +  ++        +   P+   +  V++ S    +
Sbjct: 253 WRRMEANGDIYADTYAGWYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRL 312

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQK 301
              ++ L  L   +  FI  D       S ++  + +L+     +  G+  P   +    
Sbjct: 313 SAYQEKLLKLYTDNPDFIGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMY 372

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +D            D+       SD ++ Y+ AD               ++++G D  
Sbjct: 373 VWVDALTNYITGVGFPDE-------SDKNWRYWPAD---------------VHIIGKD-- 408

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             + R  AV        A I V        +      KMSK  G+ +   ++ D+ G D 
Sbjct: 409 --IIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKSVGNVVDPFNLADQYGVDQ 466

Query: 422 VRFMMLWR 429
           +R+  L  
Sbjct: 467 MRYFFLRE 474


>gi|331701630|ref|YP_004398589.1| leucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128973|gb|AEB73526.1| leucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 806

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +        +     +          +       KMSK  G+ I
Sbjct: 528 LYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGTNHEKMSKSKGNVI 587

Query: 409 TLRHVVDEVGSDSVRFMML 427
               +VDE G+D++R   +
Sbjct: 588 NPDDIVDEYGADTLRVYEM 606


>gi|328474598|gb|EGF45403.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 688

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 43/217 (19%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 199 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 258

Query: 303 DMDR--------KQLLFRSTMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNM 352
            +D         K L  +   +  D D    K   +  Y +   D+ YF           
Sbjct: 259 WLDAPIGYMGSFKNLCNKRDDL--DFDEYWNKDSKTELYHFIGKDIVYF----------- 305

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  HS +     A+      +K   NV +   V +       KMSK  G F+    
Sbjct: 306 -------HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKAST 350

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +D +  + +R+    + NS + D D        + N
Sbjct: 351 YLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 387


>gi|297290465|ref|XP_001105797.2| PREDICTED: valyl-tRNA synthetase [Macaca mulatta]
          Length = 1247

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 308 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 367

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 368 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 411

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 412 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 455

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 456 VTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 500


>gi|296197731|ref|XP_002746402.1| PREDICTED: valyl-tRNA synthetase [Callithrix jacchus]
          Length = 1264

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 440

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 63/410 (15%), Positives = 126/410 (30%), Gaps = 59/410 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V DT+   + + GY+V    Y+++     + L  +       
Sbjct: 4   CGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQ---YVSNFTDVDDKLIKAANEL--- 57

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                D       +   Y + V   L  K+++      E        D  ++ + +++  
Sbjct: 58  ---GEDVPTIADRFVEAYFEDV-TALGCKHATVHPRVTENM------DIIIEFIQELVNK 107

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
              A   + D++    +F        + I D       +  G       K     D    
Sbjct: 108 GY-AYESEGDVYFRTKEFEGYGKLSHQPIAD-------LRHGARIEVGEKKQDPLDF--- 156

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L   +       + P  K    +    + +A    KY     + I +            
Sbjct: 157 ALWKDAKEGEIFWESPWGKGRPGWHIECSAMA---RKY---LGDTIDIHAGGQDLAFPHH 210

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
           E   A       +       +   Y +    KMSK  G+FI +  ++ +     +RF ML
Sbjct: 211 ENEIAQSEALTGK-TFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFML 269

Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
                  ++F    +  QS  N +  ++ AY   +     + D                 
Sbjct: 270 SVHYRHPINFSEELL--QSTNNGLERIKTAYGNLKHRMESSTD----------------- 310

Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIA--QEPYKLAFYLYDLASVFHGH 535
               D +E  L   L ++    E A          +   LY++A+  + +
Sbjct: 311 --LTDHNEKWLA-ELEKFQTAFEEAMNDDFNTANAITE-LYNVANHANQY 356


>gi|217976530|ref|YP_002360677.1| leucyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782506|sp|B8EQP4|SYL_METSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217501906|gb|ACK49315.1| leucyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 876

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       S      N   +     +E     P+G +H+GH R   +GD +A      G+
Sbjct: 14  KWRDKWERSATFKTDNDDPRPKYYVLEMF-PYPSGRIHMGHVRNYTMGDVIARYKRARGF 72

Query: 160 EV 161
            V
Sbjct: 73  SV 74


>gi|187250504|ref|YP_001874986.1| glutamyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238064691|sp|B2KAV3|SYE_ELUMP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|186970664|gb|ACC97649.1| Glutamyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 488

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 90/289 (31%), Gaps = 34/289 (11%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-Q 187
           + +PTG +H+G  R A+     A    + G  V R     D          ++F   +  
Sbjct: 8   APSPTGFLHIGGVRTALFNYLFAK--RYGGTFVLRIE-DTDELRSTEESTQAIFDGLEWT 64

Query: 188 ALYNNDSDLPEGYYPGVYL-----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
            L  ++    +G   G Y      + V   +  KY  +LL           K Y     +
Sbjct: 65  KLLWDEGPFRDGKENGPYPPYLQSERVKAGIYQKYIDQLLEEG-----KAYKCYCTPEEL 119

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
           + +R++  A  +            + + +        L  QG         P   + +  
Sbjct: 120 EAMREEAAAKKLPPRYPGKCKHLTKDEQAA-------LEAQGRKPVIRFNMPSEGSVEWA 172

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D+ R  + F S    D  D  + K  G  TY   + A     +     ++I   G DH  
Sbjct: 173 DLIRGPVSFAS---KDLYDLVISKPSGFPTY---NFACVIDDHLMEMSHIIR--GEDHIS 224

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
                  +  A      +        + +       K+SKR G    + 
Sbjct: 225 NTPMQIQMYKAFGWTPPEFGH-----LPMIHGSDGTKLSKRHGATNVIE 268


>gi|182678696|ref|YP_001832842.1| valyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634579|gb|ACB95353.1| valyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 912

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +      +    +V +  LV   RD    KMSK  G+
Sbjct: 512 TGFD-IIFFW-------VARMMMMGLHFLGEVPFRDVYIHALV---RDEKGAKMSKTKGN 560

Query: 407 FITLRHVVDEVGSDSVRFMMLW 428
            I   ++VD+ G+D++RF +  
Sbjct: 561 VIDPLNLVDQYGADALRFTLAS 582


>gi|149238235|ref|XP_001524994.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
 gi|146451591|gb|EDK45847.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
          Length = 608

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
                 A   +  +  ++    +        +KMSK  G+ I  + ++D  G D VRF  
Sbjct: 333 WPIFLIAAGIELPKEVIVHSHWLSDG-----VKMSKSLGNVIKPKDILDYYGIDPVRFFF 387

Query: 427 LWRKNSEL 434
           +   N   
Sbjct: 388 MENSNISD 395


>gi|170728031|ref|YP_001762057.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688645|sp|B1KDW0|SYL_SHEWM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169813378|gb|ACA87962.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 859

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PSEIEAKVQQHWQDTKTFEVTEDENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RLQGKNV 73


>gi|114606509|ref|XP_001160008.1| PREDICTED: valyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114606511|ref|XP_518361.2| PREDICTED: valyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 1264

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 64/225 (28%), Gaps = 39/225 (17%)

Query: 96  SYLRKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           +              EYGR  +          +     N TG +H+GH     + D+L  
Sbjct: 307 AAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTR 366

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
                G         + AG     +     WR                  G+    +G+E
Sbjct: 367 WHRMRGETTLWNPGCDHAGIATQVVVEKKLWRE----------------QGLSRHQLGRE 410

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
               +  E+  + EEK   I                LK L    D   +         + 
Sbjct: 411 ---AFLQEVWKWKEEKGDRIYHQ-------------LKKLGSSLDWDRACFTMDPKLSAA 454

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQ----KCDMDRKQLLFRS 313
           + +    L  +G +Y        S T        ++D+K+L  R+
Sbjct: 455 VTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRT 499


>gi|114319561|ref|YP_741244.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312502|sp|Q0ABN3|SYL_ALHEH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114225955|gb|ABI55754.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 864

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +             +      +G K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEQIEAQAQRYWDEQQSFAAREEREGEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMQGRNV 73


>gi|57505384|ref|ZP_00371312.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016209|gb|EAL52995.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 870

 Score = 38.7 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 102/339 (30%), Gaps = 60/339 (17%)

Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169
           I+  +++  +G    I     N TG +H+GH     + D +       GY+   +  ++ 
Sbjct: 22  IDSNKSIQKEGKNFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMDGYKTLYQPGLDH 81

Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229
           AG     +                         G+  + +G+E   K   E       K 
Sbjct: 82  AGIATQNVVEKQLLA-----------------QGITKEELGREKFIKKVWEWKEQSGGKI 124

Query: 230 LPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRGD--------PSPIRDI 276
           L  ++   +      +R  +      A+         E    RG+           + DI
Sbjct: 125 LEQMRTLGITPAWSRLRFTMDDGLANAVKKAFVKLYDEKLIVRGNYMINWCTHDGALSDI 184

Query: 277 -IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-------------MVGDDVDR 322
            ++    +G +Y        S+        R +  F  T              VG +V  
Sbjct: 185 EVEYKENKGKLYHIKYFLKDSEEFLIVATTRPETFFGDTAVMVHPDDERYAKFVGKEVVL 244

Query: 323 PLLK------SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376
           PL K      +D S      D      K     D   Y +G  H            +V +
Sbjct: 245 PLSKKAIKIIADES---VEKDFGTGVVKVTPAHDMNDYEVGLRHHLEF-------LSVFD 294

Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           +K  +N    E + L R     K+ ++  +   +  + +
Sbjct: 295 EKGILNEHCLEFMGLERLEAREKIVQKLENLGFIEKIEE 333


>gi|332799629|ref|YP_004461128.1| glutamyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697364|gb|AEE91821.1| glutamyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 491

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 106/328 (32%), Gaps = 53/328 (16%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ-INTLALSVFWRYQQ 187
           + +PTG +H+G  R A+      +L+       T    I D   +     +     R  +
Sbjct: 10  APSPTGSLHIGGARTALF-----NLLFARHNNGTFVLRIEDTDTERSTEESTQQILRSLK 64

Query: 188 ALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
            L  +  + PE G   G Y +    EL  K    LL   +                    
Sbjct: 65  WLGLDWDEGPEKGGNFGPYFQSQRLELYKKEVDRLLAEGKA------------YYCYCSP 112

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL--------ARQGYVYEGILPPPKSKT 298
           ++L            E     G P        NL          +G  Y   L  P+   
Sbjct: 113 EELSERR--------EAALKAGKPPKYDGRCRNLTPEQRKKFEDEGRPYTIRLKMPEEGQ 164

Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358
           T   D+ R  ++F ++++    D  ++KS+G  TY   + A           ++I     
Sbjct: 165 TVVEDLIRGTVVFDNSVLD---DLIIVKSNGIPTY---NFACVVDDNAMKMTHIIR--AE 216

Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-- 416
           +H     +      A+  +  +        V +       K+SKR G   ++    D+  
Sbjct: 217 EHLSNTPKQIQTYLALGYEIPKFAH-----VPMILAPDRSKLSKRHG-ATSVEEFRDQGY 270

Query: 417 VGSDSVRFMMLWRKNSELLD--FDFCKV 442
           +    + ++ L   + E  +  FD  K 
Sbjct: 271 LAESIINYLTLLGWSPEGTEEIFDMDKA 298


>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229558616|sp|A9VNA2|SYC_BACWK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 465

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 102/342 (29%), Gaps = 37/342 (10%)

Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166
               E+      K                +H+G+ R  +V DT+   + + GY+V    Y
Sbjct: 11  RQKEEFMPLEENKVKMYV---CGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQ---Y 64

Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226
           +++     + L  +            D       +   Y + V   L  K+++      E
Sbjct: 65  VSNFTDVDDKLIKAANEL------GEDVPTIADRFVEAYFEDV-TALGCKHATVHPRVTE 117

Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286
                   D  ++ + +++     A   + D++    +F        + I D       +
Sbjct: 118 NM------DIIIEFIQELVNKGY-AYESEGDVYFKTKEFEGYGKLSHQPIAD-------L 163

Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346
             G       K     D     L   +       + P  K    +    + +A    KY 
Sbjct: 164 RHGARIEVGEKKQDPLDF---ALWKAAKEGEIFWESPWGKGRPGWHIECSAMA---RKY- 216

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
               + I +            E   A       +       +   Y +    KMSK  G+
Sbjct: 217 --LGDTIDIHAGGQDLAFPHHENEIAQSEALTGK-TFARYWMHNGYININNEKMSKSLGN 273

Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448
           FI +  ++ +     +RF ML       ++F    ++  +  
Sbjct: 274 FILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTNNG 315


>gi|127513857|ref|YP_001095054.1| leucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166231642|sp|A3QH47|SYL_SHELP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126639152|gb|ABO24795.1| leucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 863

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           PS +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PSEIEAKVQQHWQDTKTFEVTEDESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RLQGKNV 73


>gi|326693728|ref|ZP_08230733.1| leucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 803

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 342 KCKYERGFDNMIYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDG 395
           K KY    D  +YV G++H+     Y +        +     K     L+ + + L  + 
Sbjct: 516 KLKYWMNVD--LYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGEN- 572

Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427
              KMSK  G+ +    +V E G+D++R   +
Sbjct: 573 -HEKMSKSKGNVVNPDDIVAEFGADTLRVYEM 603


>gi|269103202|ref|ZP_06155899.1| glutamyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163100|gb|EEZ41596.1| glutamyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 474

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 89/279 (31%), Gaps = 38/279 (13%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +HVG  R A+     A            E+ +      +            + 
Sbjct: 8   APSPTGFLHVGGARTALYSWLYAK-------HNNGEFVLRIEDTDLERSTQEAIDAIMEG 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
           +   + +  EG Y           + D+         E+K       Y  + ++  IR++
Sbjct: 61  MEWLELNWDEGPYYQTKRFDRYNAVVDQL------LAEDKAYKC---YCPKELLDEIREE 111

Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308
             A  ++           R D +  + I  N A        I      + T   D   + 
Sbjct: 112 QMAAGVKP----------RYDANHPKIIAANAAATEDSPFCIRFRNPKEGTVVFDDKIRG 161

Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
            +  +    D  D  + ++DGS TY   +       ++ G   +  V G DH     R  
Sbjct: 162 RIEIANSELD--DLIIRRTDGSPTY---NFCVVIDDWDMGITQV--VRGEDHINNTPRQI 214

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +  A+     +        + L  DG   K+SKR G  
Sbjct: 215 NIYKALGAPVPEFAHC---AMILGDDGA--KLSKRHGAV 248


>gi|218295051|ref|ZP_03495887.1| isoleucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244254|gb|EED10779.1| isoleucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 1047

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 30/171 (17%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L  +   +    A  NV+   L+    D    KMSK  G+ +    ++ 
Sbjct: 551 GIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLI---LDEKGQKMSKSKGNVVDPWDIIR 607

Query: 416 EVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKE-------NPVFYVQYAYARCRSIFRQ 467
           E G+D++R ++ +         F    V+E  ++          F+V YA          
Sbjct: 608 EFGADALRWYIYISAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYA---------- 657

Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518
                   + D       P   E    +  L+  + +  + +  A  A +P
Sbjct: 658 --------NLDRPNLKSPPPPKERPELDRWLLARMQDLIQRVTEALEAYDP 700


>gi|153839838|ref|ZP_01992505.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746645|gb|EDM57633.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 499

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 43/217 (19%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 199 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 258

Query: 303 DMDR--------KQLLFRSTMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNM 352
            +D         K L  +   +  D D    K   +  Y +   D+ YF           
Sbjct: 259 WLDAPIGYMGSFKNLCNKRDDL--DFDEYWNKDSKTELYHFIGKDIVYF----------- 305

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  HS +     A+      +K   NV +   V +       KMSK  G F+    
Sbjct: 306 -------HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKAST 350

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +D +  + +R+    + NS + D D        + N
Sbjct: 351 YLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 387


>gi|45190649|ref|NP_984903.1| AER043Cp [Ashbya gossypii ATCC 10895]
 gi|44983628|gb|AAS52727.1| AER043Cp [Ashbya gossypii ATCC 10895]
          Length = 873

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           +   S V+SG+        +     +      P+G +H+GH R   + D L       GY
Sbjct: 27  QKWKSKVLSGVPQPAAEGTRPHMYVLSMF-PYPSGMLHIGHLRVYTISDALNRFYRMKGY 85

Query: 160 EVT 162
           EV 
Sbjct: 86  EVV 88


>gi|88859987|ref|ZP_01134626.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817981|gb|EAR27797.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 673

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 64/214 (29%), Gaps = 38/214 (17%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       ++          + + +   +  +Q  +     Y G   P         
Sbjct: 192 DLPAFEGMLKTWLRSGSIQSEMANKLEEWFADGLQQWDISRDAPYFGFEIPNAPGKYFYV 251

Query: 303 DMDRKQLLFRS-----TMVGDDVDRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIYV 355
            +D       S        G + D    K SD   Y +   D+ YF              
Sbjct: 252 WLDAPIGYMASFKNLCDKTGLNFDEFWSKDSDAELYHFIGKDIIYF-------------- 297

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
               HS +     A+      +K   NV     V +       KMSK  G FI  R  +D
Sbjct: 298 ----HSLF---WPAMLEGADFRKPT-NVFAHGFVTV----NGAKMSKSKGTFIKARTYLD 345

Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +  + +R+    + NS + D D        + N
Sbjct: 346 HLNPEYLRYYFAAKLNSGITDLDLNLEDFAQRVN 379


>gi|301299859|ref|ZP_07206093.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852530|gb|EFK80180.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 470

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 100/329 (30%), Gaps = 30/329 (9%)

Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170
           +  +       KV +          +H+G+ R AV  DT+   + + G+EV    Y+++ 
Sbjct: 11  QKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFEV---NYVSNF 67

Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230
               + +      +  Q +  +  ++ E +    Y       +     +  +    +  +
Sbjct: 68  TDVDDKII-----KASQEMNLSVKEITEKFINAFYEDTSALNVKKATLNPRVMDNMDDII 122

Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
             ++    +          ++    +       D+ +     I D+      QG      
Sbjct: 123 KFIEVLVQKGYA------YESAGDVYYKTRKFKDYGKLSGQLIDDL-----EQG----AS 167

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
                    +K D     L  ++       D P     G   +    +       +   D
Sbjct: 168 SRVDDIDQDKKQDPLDFALWKKAKQGEISWDSPW--GQGRPGWH---IECSVMSTKYLGD 222

Query: 351 NMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409
             I +            E  +A + ++   +          +       KMSK  G+F+T
Sbjct: 223 T-IDIHAGGQDLEFPHHENEIAQSEAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVT 281

Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           +  ++ EV    +RF M   +    + + 
Sbjct: 282 VHDLLKEVNPQVIRFFMSTTQYRRPIRYS 310


>gi|224538678|ref|ZP_03679217.1| hypothetical protein BACCELL_03572 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519722|gb|EEF88827.1| hypothetical protein BACCELL_03572 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 876

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 64/255 (25%), Gaps = 43/255 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +   +   +         I     N TG +H+GH     + D L   
Sbjct: 8   NPADVEGKWYQYWLD-HKLFSSKPDGREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                +  +++   +    L               +LKH   E 
Sbjct: 67  ARMEGKNAC-------WVPGTDHASIATEAKVVNKLAAQGIK-KTDLTRDEFLKH-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D++                          II   L+ L    D   +           +
Sbjct: 118 TDEHG------------------------GIILKQLRKLGASCDWDRTAFTMDEKRSESV 153

Query: 274 RDIIDNLARQGYVYEGI---------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
             +  +L  +G +Y G+         L     +     +   K    R  + GD   R  
Sbjct: 154 LKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDAEGRYA 213

Query: 325 LKSDGSYTYFAADLA 339
           + +         D A
Sbjct: 214 VVATTRPETIMGDTA 228


>gi|254516563|ref|ZP_05128622.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674986|gb|EED31353.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 822

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
           Y  P  + +   +       +      +G K     +   P+G +H+GH R   + D +A
Sbjct: 7   YYDPQNIERDAQAFWTDHRSFAARDTLEGEKFYCLSMFPYPSGKLHMGHVRNYSISDAIA 66

Query: 152 SLMAFSGYEV 161
                 G  V
Sbjct: 67  RYQRMLGKNV 76


>gi|145347651|ref|XP_001418276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578505|gb|ABO96569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 546

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 91/286 (31%), Gaps = 46/286 (16%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +HVG  R A+          G  +  +        TR           +++  
Sbjct: 56  APSPTGSLHVGGARTALFNYLYAKKMGGKFVLRVEDTDQARSTRAS--------EDSMVA 107

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
            + W         D   P G Y       + K LA+K  +    +P         D  ++
Sbjct: 108 DLKWLGLDWDEGPDVGGPCGPYRQSERGEIYKALAEKLVASGHVYP-----CFCTDEELE 162

Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299
           AM     +  K L  ++              +     +  +  +G  +      P+ +  
Sbjct: 163 AMKAEAEE--KKLPPKYMG---------KWATASEAEVKEMMDKGVPFTYRFRVPEGERI 211

Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359
           +  DM R ++ + +  +GD     +L+S+G   Y   +          G  +++     +
Sbjct: 212 EIDDMVRGKVGWDTNTLGDF---VVLRSNGMPVY---NFCVAVDDATMGITHVLR--AEE 263

Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           H     R   V  A+         +      L       K+SKR G
Sbjct: 264 HLPNTLRQALVYNALGFPLPTFAHM-----SLILAPDRSKLSKRHG 304


>gi|161511054|ref|NP_798448.2| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879483|ref|ZP_05891838.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898218|ref|ZP_05906714.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260903217|ref|ZP_05911612.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|61252102|sp|Q87N07|SYM_VIBPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|308088382|gb|EFO38077.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093540|gb|EFO43235.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106544|gb|EFO44084.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 688

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 43/217 (19%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 199 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 258

Query: 303 DMDR--------KQLLFRSTMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNM 352
            +D         K L  +   +  D D    K   +  Y +   D+ YF           
Sbjct: 259 WLDAPIGYMGSFKNLCNKRDDL--DFDEYWNKDSKTELYHFIGKDIVYF----------- 305

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  HS +     A+      +K   NV +   V +       KMSK  G F+    
Sbjct: 306 -------HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKAST 350

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +D +  + +R+    + NS + D D        + N
Sbjct: 351 YLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 387


>gi|218562677|ref|YP_002344456.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|12644012|sp|P41257|SYI_CAMJE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112360383|emb|CAL35179.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 917

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTT---DEKGQKMSKSKGNVIASEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|121612940|ref|YP_001000740.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005660|ref|ZP_02271418.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249207|gb|EAQ72168.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 917

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 354 YVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           Y+ GSD   G+ +    V  A++E     ++L         D    KMSK  G+ I   +
Sbjct: 567 YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTT---DEKGQKMSKSKGNVIASEY 623

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472
           V    G + +R  +L    S  L      +K+  ++         Y + R+  R      
Sbjct: 624 VAKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQ---------YRKIRNTIRFLLANT 674

Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532
            DL              + +  E      + ++  ++  AT   +  K AF+ Y+ A  F
Sbjct: 675 NDL-------------KDLEVKEFS---FIDKW--ILSRATKVFKASKEAFFAYEFAKGF 716

Query: 533 H 533
            
Sbjct: 717 S 717


>gi|110632786|ref|YP_672994.1| isoleucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110283770|gb|ABG61829.1| Isoleucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 985

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189
               G +H+GH    V+ D +       GY+     Y+         +   +  +Y+   
Sbjct: 64  PYANGNIHIGHALNKVLKDVITRSFQMRGYDS---NYVPGWDCHGLPIEWKIEEQYRAKG 120

Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249
            N D ++P   +     +     +        +   E + L +V D+           + 
Sbjct: 121 KNKD-EVPINEFRRECREFATHWIK-------VQGEEFQRLGVVGDFKNPYTTMAYHAE- 171

Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDN--LARQGYVYEG 289
             +  +   F      +RG    +  +++   LA     Y  
Sbjct: 172 ARIAGELLKFAMSGQLYRGSKPVMWSVVERTALAEAEVEYHD 213


>gi|89073403|ref|ZP_01159927.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050890|gb|EAR56364.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 681

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 69/230 (30%), Gaps = 28/230 (12%)

Query: 274 RDIIDNLARQGYVYE---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330
             ++    + G + E     +        Q+ D+ R    F   + G+      +  D  
Sbjct: 199 ESMLKEWTKSGALQEETSNKMQEWFESGLQQWDISRDAPYFGFEIPGETGKYFYVWLDAP 258

Query: 331 YTYFAADLAYFKCKYERGFDNMIY---------VMGSD----HSGYVKRLEAVAAAVSEK 377
             Y  +       + +  FD              +G D    HS +     A+      +
Sbjct: 259 IGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFHSLF---WPAMLDGAGFR 315

Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437
           K   NV +   V +       KMSK  G FI     +  +  + +R+    + NS + D 
Sbjct: 316 KPN-NVFVHGYVTV----NGAKMSKSKGTFIKASTYLKHLDPECLRYYYAAKLNSRIDDL 370

Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487
           D        + N     +          R A  I    D  L    V P+
Sbjct: 371 DLNLEDFTQRVNSDVVNK----IVNLASRNAGFIAKRFDGKLSDNFVEPE 416


>gi|326797485|ref|YP_004315304.1| isoleucyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326548249|gb|ADZ76634.1| Isoleucyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 1137

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415
           G D   G+   L A+A  + +  A  NV+   LV    D    KMSKR G+ +     + 
Sbjct: 647 GVDQTRGWFFTLHAIATMLCDSVAFKNVVSNGLV---LDKNGNKMSKRLGNAVDPFATIS 703

Query: 416 EVGSDSVRFMMLWRKNS-ELLDFD---FCKVKEQSKE----NPVFYVQYAYARCRS 463
           +  +D+ R+ M+      + L F+     +V+ +          F+  YA     S
Sbjct: 704 KYSADATRWYMISNAAPWDNLKFNEEGLDEVRRKFFGTLYNTYAFFALYANIDGFS 759


>gi|294635538|ref|ZP_06714018.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091107|gb|EFE23668.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 682

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 65/215 (30%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A       +           + +++  ++  +Q  +     Y G   P         
Sbjct: 199 DLPAFGAMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRDAPYFGFEIPDAPGKYFYV 258

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLK-SDGS-YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K SD   Y +   D+ YF             
Sbjct: 259 WLDAPIGYMGSFKNLCDKRGDLSFDAYWSKESDAELYHFIGKDIVYF------------- 305

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K   NV +   V +       KMSK  G FI  R  +
Sbjct: 306 -----HSLF---WPAMLEGSGFRKPS-NVFVHGYVTV----NGAKMSKSRGTFIQARTYL 352

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
           + +  D +R+    + ++ + D D        + N
Sbjct: 353 NHLDPDCLRYYYAAKLSARIDDIDLNLEDFVQRVN 387


>gi|297582830|ref|YP_003698610.1| choline/carnitine/betaine transporter [Bacillus selenitireducens
           MLS10]
 gi|297141287|gb|ADH98044.1| choline/carnitine/betaine transporter [Bacillus selenitireducens
           MLS10]
          Length = 649

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 48/137 (35%), Gaps = 5/137 (3%)

Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231
            Q   +   V+   +   Y+   +             + +E+ D +  E+ +  +++   
Sbjct: 510 KQTKRVKDEVYGGMKDEFYDEFREEAYDEMKEEVYGQMKEEVYDDFKDEVYDEFKDETYD 569

Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR--QGYVYEG 289
            VKD   + M +   +D K     +D  + E+ + +       DI + +    +  +YE 
Sbjct: 570 RVKDEVYEQMKEEAYEDFK--GEAYD-KVKEEVYEQVKDEVYDDIKEEVYEEFKEKIYED 626

Query: 290 ILPPPKSKTTQKCDMDR 306
           +      +   + +   
Sbjct: 627 LRDDLGEQLNGELESPD 643


>gi|110633924|ref|YP_674132.1| valyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284908|gb|ABG62967.1| valyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 926

 Score = 38.7 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            GFD +I+         V R+  +    + ++    V +  LV   RD    KMSK  G+
Sbjct: 530 TGFD-IIFFW-------VARMMMMGLHFTGREPFHTVYVHALV---RDKNGAKMSKSKGN 578

Query: 407 FITLRHVVDEVGSDSVRFMM 426
            I    ++D+ G+D++RF +
Sbjct: 579 VIDPLELIDQYGADALRFTL 598


>gi|294933045|ref|XP_002780570.1| hypothetical protein Pmar_PMAR001164 [Perkinsus marinus ATCC 50983]
 gi|239890504|gb|EER12365.1| hypothetical protein Pmar_PMAR001164 [Perkinsus marinus ATCC 50983]
          Length = 1145

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 16/168 (9%)

Query: 342 KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400
           K K+E+ F       G D   G+   +  +A  + ++ A    L+   + L  DG   KM
Sbjct: 555 KEKFEKNFPADFVAEGLDQTRGWFYTMTVIATHLFDEPA-FKNLVVNGLILAADGK--KM 611

Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRK--NSELLDFDFCKVKEQSKENPVFYVQYAY 458
           SKR  ++     V D  G+D+VR  M       +E L F    V++  KE  VF   Y  
Sbjct: 612 SKRLKNYPDPTEVFDRYGADAVRMYMCNSPVVRAEPLKFREEGVRDTVKE--VFLPLYNA 669

Query: 459 AR------CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500
            R      CR  F + ++     D      +  P +     +  +L+ 
Sbjct: 670 YRFLVQETCR--FEKQENTKFSPDRTYIHESSNPTDHWIYAASQELLK 715


>gi|222055264|ref|YP_002537626.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782500|sp|B9M9F3|SYL_GEOSF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221564553|gb|ACM20525.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 824

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P+ + +    +  S   +    +   +K  +  +   P+G +H+GH R   +GD +A   
Sbjct: 7   PARVEEKWQKLWDSNKSFKAEKVEGKSKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFK 66

Query: 155 AFSGYEV 161
              G+ V
Sbjct: 67  RMKGFNV 73


>gi|218961403|ref|YP_001741178.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730060|emb|CAO80972.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 827

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K  +     GI    +   K     +      P+G +H+GH     +GD ++ L    GY
Sbjct: 11  KWQNIWRERGIFNAPDTSSKPKYYVLSMF-PYPSGVLHIGHISNYSIGDVISRLKMMEGY 69

Query: 160 EVT 162
            V 
Sbjct: 70  NVM 72



 Score = 38.0 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 354 YVMGSDHS----GYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           Y+ G +H+     Y +        +      +    L     + +DG   KMSK  G+ +
Sbjct: 531 YIGGIEHACMHLLYARFFHKFMRDLGWVNCDEPFARLLTQGMVTKDGA--KMSKSKGNVV 588

Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSE 433
             ++++D  G+D++R  +L+    E
Sbjct: 589 DPQYIIDRFGADTLRTFLLFASPPE 613


>gi|119945339|ref|YP_943019.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|187647755|sp|A1SVA5|SYM_PSYIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119863943|gb|ABM03420.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 686

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL        ++           + + +  +   +Q  +     Y G   P         
Sbjct: 194 DLPQFEDMLKVWTKSGALQTEMANKVGEWFETGLKQWDITRDAPYFGFEIPDAPGKFFYV 253

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD--- 359
            +D       S     D    L   D    Y+  D A     +          +G D   
Sbjct: 254 WLDAPIGYMGSFKNLCDKTEGLNFDD----YWKKDSAAELYHF----------IGKDIVN 299

Query: 360 -HSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
            HS +     AV      +K   +NV     V         KMSK  G FI     +D +
Sbjct: 300 FHSLF---WPAVLEGAGFRKPTAVNVHGYVTVN------GAKMSKSKGTFIKASTYLDNL 350

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
             + +R+    +  S + D D        + N
Sbjct: 351 DPECLRYYYAAKLTSRIDDLDLNLEDFTQRVN 382


>gi|30410812|ref|NP_660424.2| glutamyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 485

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 98/283 (34%), Gaps = 56/283 (19%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A             Y+    G  I  +  + F R+   
Sbjct: 19  APSPTGNLHIGSIRTALYSWLFAR-----------HYH----GKFILRIEDTDFERF--- 60

Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248
               DS   E    G  LK +G           LN+ E  +    +    + ++K++ + 
Sbjct: 61  ----DSKSVESILYG--LKWLG-----------LNWDEGPYFQSKRLERYKEVIKMMLES 103

Query: 249 LKALNIQHDIFISEDD----FHRGDPSPIRDIIDNLARQGYV----YEGILPPPKSKTTQ 300
             A      +   ED+      +G       I  NL  + Y+    Y      P S    
Sbjct: 104 GNAYKCFCSVKELEDERIRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISGQVT 163

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D  R ++ F++  +    D  + +S+G  TY   +        +    ++I   G DH
Sbjct: 164 FEDKIRGKITFQNEELD---DLVIQRSNGIPTY---NFCVVIDDLDMNITHVIR--GEDH 215

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403
                R   +  +++ K     + +   V +  +    K SKR
Sbjct: 216 INNTPRQINILKSLNAK-----IPIYAHVSMIFNEDGHKFSKR 253


>gi|24665321|ref|NP_648894.2| CG4573 [Drosophila melanogaster]
 gi|7294109|gb|AAF49463.1| CG4573 [Drosophila melanogaster]
          Length = 511

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 50/290 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A  +   G  + R   I D       L      R  + 
Sbjct: 26  APSPTGYLHLGGLRTALYNFLYARHLG--GKFLLR---IED--TDQTRLVPGASERLVED 78

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
           L     ++ E    G   G Y++    E+  K   ELL+       F  E+ L +++  +
Sbjct: 79  LLWAGIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLDLLRKEA 138

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++      R   +  N    +  SE              +D+L  +G     I       
Sbjct: 139 LRT-----RQVPRYDNKCRHLTTSE--------------VDSLLAKG-TPYCIRFKLTDH 178

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D+   ++     +  ++ D  ++KSD   TY  A++      +  G  +++   G
Sbjct: 179 EEPLDDLIYGKV--HHNVSDNEGDPVVMKSDQFPTYHFANV---VDDHLMGITHVLR--G 231

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +      +   +  A   +  +        + L  +    K+SKR GD 
Sbjct: 232 VEWQISTTKHLLLYKAFGWQPPKFGH-----LPLLVNADGTKLSKRQGDI 276


>gi|86153279|ref|ZP_01071483.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843005|gb|EAQ60216.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 462

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 101/304 (33%), Gaps = 47/304 (15%)

Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILP 292
           +   +  +K   +D++ LN+    F      +    + + D+I  LA+ G+VY  E  + 
Sbjct: 82  EEITEFYIKSYEEDMRVLNVLDPDFKPRATHY---ITAMLDLIKKLAKDGFVYTLEDGIY 138

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDV------DRPLLKSD----------GSYTYFAA 336
              SK  +   +  + L    + + ++V      D  L K D          G   +   
Sbjct: 139 FDTSKDEKYLSLSNRNLEENISRLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTE 198

Query: 337 DLAYFKCKYERGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            +A     +E   D     I ++   H     +             ++  +      +  
Sbjct: 199 CVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCKR------KLANIWLHNGFVKI 252

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK   +   ++  + E   +++RF +L        ++    ++   K    FY
Sbjct: 253 DGE--KMSKSLNNSFFIKDALKEFMGEALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFY 310

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-----LQLIVHLAEYPRV 508
                       ++  D+    DFD+     I  E      E     L +   LA     
Sbjct: 311 ----------RLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSKALALLDDF 360

Query: 509 IENA 512
           I NA
Sbjct: 361 INNA 364


>gi|295108271|emb|CBL22224.1| glutamyl-tRNA synthetase, bacterial family [Ruminococcus obeum
           A2-162]
          Length = 482

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 112/303 (36%), Gaps = 58/303 (19%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG MHVG+ R A+          GD +  +      +  +E Y+         + +
Sbjct: 9   APSPTGRMHVGNLRTALYAYLIAKHEDGDFILRI-----EDTDQERYME------GAVDI 57

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYS 237
                    L +++    +G   G Y++       L  KY+ +L+   +  +        
Sbjct: 58  IYRTMKNTGLLHDEGPDKDGG-VGPYVQSERQASGLYLKYAKQLIEQGD-AYYCFCGPEE 115

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEGILPP 293
           +++M +++     ++  +  + +S+++  +    G+P  IR                   
Sbjct: 116 LESMKRVVAGKEISIYDKRCLHLSKEEVQKRLDAGEPHVIR----------------FNM 159

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P   TT   D+    +   +  +    D  L+KSDG  TY   + A     +  G  ++ 
Sbjct: 160 PTEGTTTFHDVIYGDITVNNEEM---EDLILIKSDGYPTY---NFANVVDDHLMGITHV- 212

Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413
            V G+++     +   +  A         + +     L  +    K+SKR+G   +   +
Sbjct: 213 -VRGNEYLSSAPKYNRIYEAFGWD-----IPVYVHCPLITNEDHQKLSKRSGHS-SYEDL 265

Query: 414 VDE 416
           +++
Sbjct: 266 LEQ 268


>gi|293400858|ref|ZP_06645003.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305884|gb|EFE47128.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 908

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 65/345 (18%), Positives = 112/345 (32%), Gaps = 63/345 (18%)

Query: 215 DKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   +LL   +   W+P      +  M+   R D      +A  +   IF +EDD    
Sbjct: 416 DKIRDQLLEEIDNVDWIPKWGQQRMHNMIAD-RGDWCISRQRAWGVPIPIFYAEDDTPIM 474

Query: 269 DPSPIRDIIDNL------------ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--T 314
           D   + D +  L              +  + EG   P       + + D   + F S  +
Sbjct: 475 D-QTVFDHVAGLFKEFGSNIWFEKEAKDLLPEGYTHPGSPNGVFRKETDTMDVWFDSGSS 533

Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAA 373
             G  V+R L                       G+   +Y  GSD   G+      +  A
Sbjct: 534 HTGAMVERGL-----------------------GYPADLYFEGSDQYRGWFNSSLIIGTA 570

Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433
           V        VL    V    DG  +KMSK   + +    +  + G+D +R          
Sbjct: 571 VHGHSPYKQVLSHGFVM---DGKGVKMSKSQWNAVAPGEITKKYGADILRLWAASVDYQA 627

Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFD 492
                  ++ +Q  EN        Y + R+ FR    +I  + DF       +      D
Sbjct: 628 DCSMS-DEILKQISEN--------YRKVRNTFRFLLANIDGENDFTKADLVDVNTLPALD 678

Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL-ASVFHGHW 536
                +++ LA+    ++ A        +   L +L  + F  ++
Sbjct: 679 KY---MLIMLADVCEKVKKAYGEYRFADVTSMLTNLMTNEFSAYY 720


>gi|254714044|ref|ZP_05175855.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716899|ref|ZP_05178710.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261218703|ref|ZP_05932984.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261321799|ref|ZP_05960996.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260923792|gb|EEX90360.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294489|gb|EEX97985.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 910

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 512 VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALIRDKHGAKMSKSKGNVIDPLELM 569

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 570 DEYGADALRFTL 581


>gi|296126677|ref|YP_003633929.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018493|gb|ADG71730.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 472

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 97/314 (30%), Gaps = 40/314 (12%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+G+ R  V  D L  ++   GY V     + D   +    +        +         
Sbjct: 39  HIGNFRAYVFSDLLRRVLEDYGYNVKLVMNLTDVDDKTIKNSKENHISLNEYTKKYKEAF 98

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256
            E        K      A  +  E+++              +  ++K      +A    +
Sbjct: 99  FEDIKTLGIKKASVNPAATDHIKEMID--------------IIELLKKNGHTYEADGSVY 144

Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316
               +   +        +++++  + +    E            K   +    ++  +  
Sbjct: 145 FKISTFPQYGELANLDKQELLEGASGRVLNDEYDKENASDFVLWKAYTEEDGDVYWDSPF 204

Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVA 371
           G           G   +     A       + FD  I+  G D     H   + + EA  
Sbjct: 205 GK----------GRPGWHIECSAMSCKYLGKHFD--IHTGGVDNKFPHHENEIAQNEAAF 252

Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRK 430
                   +          L  DG   KMSK  G+F TLR ++D+ +  +++R+ ++   
Sbjct: 253 ------NEKFVNYWLHCEHLIVDGE--KMSKSKGNFYTLRDLLDKGLSKEAIRYSLINSH 304

Query: 431 NSELLDFDFCKVKE 444
             + L+F    +K+
Sbjct: 305 YRKQLNFTIEGIKQ 318


>gi|154487327|ref|ZP_02028734.1| hypothetical protein BIFADO_01176 [Bifidobacterium adolescentis
           L2-32]
 gi|154083845|gb|EDN82890.1| hypothetical protein BIFADO_01176 [Bifidobacterium adolescentis
           L2-32]
          Length = 849

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 24/194 (12%)

Query: 199 GYYPGVYLK------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252
           G  PG+Y            E       EL    E + +  + D  V+  +   ++DLKAL
Sbjct: 305 GILPGIYFIFSRNGCDQAVEQCINAGLELTTDDEVRRIRRIVDEMVEGQL--SQEDLKAL 362

Query: 253 NIQHDIFISEDDF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309
           +     F  E+ F   H G  +  R I++ L  +G V    +           +M  + +
Sbjct: 363 HFSQFRFALEEGFAPHHAGMVALFRQIVERLFEEGLV---KVVFATETLALGINMPARCV 419

Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369
           +       D      L + G +T              RG D + + +  DH G++    A
Sbjct: 420 VVEKLEKFDGTGHVGL-TPGEFTQLTGRAG------RRGIDTIGHAVVVDHHGFIP---A 469

Query: 370 VAAAVSEKKAQINV 383
            AAA+S K+     
Sbjct: 470 TAAALSSKRVYPLH 483


>gi|153005950|ref|YP_001380275.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5]
 gi|152029523|gb|ABS27291.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5]
          Length = 524

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 7/147 (4%)

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           ++V+G      + R  AV      + A +      LV  Y      K+SK +G  I    
Sbjct: 265 VHVIGKG----IARFHAVYWPAFLESAGLPWPTDLLVHGYVTVEGEKISK-SGRTIDPAP 319

Query: 413 VVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD- 470
           ++ E G+D+VR+ +L   + +   DF   + ++         +    +R  ++  +  + 
Sbjct: 320 LIAEYGADAVRYFLLRHIRTARDGDFSIARFRQAHDAELANGLGNLASRILALVAKLTNG 379

Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQ 497
           + P    +L     + +E+    SE+ 
Sbjct: 380 LVPAPGVELARDEDLRREALKLPSEVD 406


>gi|329769070|ref|ZP_08260492.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839561|gb|EGF89137.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 465

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 64/460 (13%), Positives = 133/460 (28%), Gaps = 80/460 (17%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
                   +H+G+ R  +V D +   +  SGYEV       D   +I         +   
Sbjct: 28  CGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYEVDFISNFTDVDDKI--------IKASN 79

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
               + ++L   Y    +  +     A    +  +    ++ +  + D   +        
Sbjct: 80  EEGISTTELTNKYIEAFFKDYDALGCARATKNPRVTEYMQEIIDFIADLVKEGFAYESNG 139

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307
           D     +       E D+ +     I D+I                       K D    
Sbjct: 140 D-----VYFRTRKKE-DYGKLSKQSIDDLI-------------SGARIEVGEHKEDPLDF 180

Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367
            L  ++       D P  +    +    + +A      +      I +            
Sbjct: 181 ALWKKAKPGEVKWDSPFGEGRPGWHIECSVMA------KETLGETIDIHAGGQDLTFPHH 234

Query: 368 E-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426
           E  +A +     A  +     +   + +   +KMSK  G+F  ++ ++ E+    +R  M
Sbjct: 235 ENEIAQSECHNHAPFSNYW--MHNAFINIDNVKMSKSLGNFRLVKDIIAEIDPMVLRLFM 292

Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486
           L       +++    + E +  N                 + K  + +L F L       
Sbjct: 293 LTVHYRTPINYTLENI-ELATTNY---------------EKLKTAYQNLQFRLNNE---T 333

Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENP 543
            E   D               V+   T   E  K   Y+ D    A+     +   R + 
Sbjct: 334 TEEVLDK-------------EVVNAVTQELE--KFEEYMQDDFNTANALSSWYELVRISN 378

Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583
                +  N++     L+L++A     +   +I+G+    
Sbjct: 379 SYTSKETVNKET----LELLNAAFETYS---SILGINVKE 411


>gi|309778072|ref|ZP_07673011.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914166|gb|EFP59967.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 908

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 65/344 (18%), Positives = 110/344 (31%), Gaps = 61/344 (17%)

Query: 215 DKYSSELL-NFPEEKWLPIVKDYSVQAMMKIIRDDL-----KALNIQHDIFISEDDFHRG 268
           DK   +LL       W+P      +  M+   R D      +A  +   IF +EDD    
Sbjct: 416 DKIREQLLTEIANVDWIPKWGQQRMHNMIAD-RGDWCISRQRAWGVPIPIFYAEDDTPIM 474

Query: 269 DPSPIRDIIDNLARQG-----------YVYEGILPPPKSKTTQKCDMDRKQLLFRS--TM 315
           D +    + +     G            + EG           + + D   + F S  + 
Sbjct: 475 DKAVFAHVAELFREHGSNIWFEKEAKELLPEGYTHTGSPNGEFRKETDTMDVWFDSGSSH 534

Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAV 374
            G  ++R L                       G+   +Y  GSD   G+      +  AV
Sbjct: 535 TGAMMERGL-----------------------GYPADLYFEGSDQYRGWFNSSLIIGTAV 571

Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434
                   VL    V    DG  +KMSK   + +    +  + G+D +R           
Sbjct: 572 HGHSPYKQVLSHGFVM---DGKGVKMSKSQWNAVAPGEITKKYGADILRLWATSVDYQAD 628

Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDT 493
                  +K+ S++         Y + R+ FR    ++ PD DF       I +  E D 
Sbjct: 629 CSMSDEILKQISEQ---------YRKVRNTFRFMLANVNPDEDFTKDDLVDIHELPELDQ 679

Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL-ASVFHGHW 536
             L L+  + E  R +  A        +   L +L  +    ++
Sbjct: 680 YILVLLNEVNE--RAV-KAYKEYRFADITNMLSNLMTNELSAYY 720


>gi|299117392|emb|CBN75348.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1072

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%)

Query: 91  LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150
           LY+  ++     ++   +        +    K  +     N TG +H+GH   A V DTL
Sbjct: 129 LYVEAAWQEYWEAAGFYTCDPAKAASMPADKKFIMVIPPPNVTGSLHLGHALTAAVEDTL 188

Query: 151 ASLMAFSGY 159
                  G+
Sbjct: 189 CRWHRMLGH 197


>gi|161511098|ref|NP_771156.2| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 543

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 27/248 (10%)

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
           WR  +A  +  +D   G+Y      +  ++        +   P+   +  V++ S    +
Sbjct: 138 WRRMEANGDIYADTYAGWYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRL 197

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQK 301
              ++ L  L   +  FI  D       S ++  + +L+     +  G+  P   +    
Sbjct: 198 SAYQEKLLKLYTDNPDFIGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMY 257

Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361
             +D            D+       SD ++ Y+ AD               ++++G D  
Sbjct: 258 VWVDALTNYITGVGFPDE-------SDKNWRYWPAD---------------VHIIGKD-- 293

Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421
             + R  AV        A I V        +      KMSK  G+ +   ++ D+ G D 
Sbjct: 294 --IIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKSVGNVVDPFNLADQYGVDQ 351

Query: 422 VRFMMLWR 429
           +R+  L  
Sbjct: 352 MRYFFLRE 359


>gi|21064393|gb|AAM29426.1| RE18828p [Drosophila melanogaster]
          Length = 511

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 50/290 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A  +   G  + R   I D       L      R  + 
Sbjct: 26  APSPTGYLHLGGLRTALYNFLYARHLG--GKFLLR---IED--TDQTRLVPGASERLVED 78

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
           L     ++ E    G   G Y++    E+  K   ELL+       F  E+ L +++  +
Sbjct: 79  LLWAGIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLDLLRKEA 138

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++      R   +  N    +  SE              +D+L  +G     I       
Sbjct: 139 LRT-----RQVPRYDNKCRHLTTSE--------------VDSLLAKG-TPYCIRFKLTDH 178

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D+   ++     +  ++ D  ++KSD   TY  A++      +  G  +++   G
Sbjct: 179 EEPLDDLIYGKV--HHNVSDNEGDPVVMKSDQFPTYHFANV---VDDHLMGITHVLR--G 231

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +      +   +  A   +  +        + L  +    K+SKR GD 
Sbjct: 232 VEWQISTTKHLLLYKAFGWQPPKFGH-----LPLLVNADGTKLSKRQGDI 276


>gi|271499792|ref|YP_003332817.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343347|gb|ACZ76112.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 676

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 69/253 (27%), Gaps = 43/253 (16%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A +     +           + +++  D   +Q  +     Y G   P         
Sbjct: 194 DLPAFSDMLQGWTRSGALQEQVANKMQEWFDAGLQQWDITRDAPYFGFEVPDAPGKYFYV 253

Query: 303 DMDRKQLLFRSTMVGDDVDRPL-----LKSDGS---YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D    L      + D S   Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K     +      +  +G   KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPTNLFVHGY---VTVNGA--KMSKSRGTFIKADTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474
             + +D +R+    + +S + D D        + N                R A  I   
Sbjct: 348 RHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNA----DIVNKVVNLASRNAGFINKR 403

Query: 475 LDFDLFPRNVIPQ 487
            D  L      P 
Sbjct: 404 FDGQLADSLADPA 416


>gi|212638274|ref|YP_002314794.1| leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226731223|sp|B7GK53|SYL_ANOFW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212559754|gb|ACJ32809.1| Leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 15/108 (13%)

Query: 329 GSYTYFAADLAYFKCKYERGFDNM-------IYVMGSDHS----GYVKRLEAVAAAVS-- 375
           GS  Y+   +     K     + +       IY+ G++H+     Y +        +   
Sbjct: 495 GSCWYYLRYIDPHNDKQLADPEKLEKWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVV 554

Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423
             K     L  + + L  +    KMSK  G+ +    +V+  G+D++R
Sbjct: 555 PTKEPFQKLFNQGMILGEN--NEKMSKSKGNVVNPDDIVESHGADTLR 600


>gi|167630718|ref|YP_001681217.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687869|sp|B0TBJ3|SYL_HELMI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167593458|gb|ABZ85206.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 846

 Score = 38.7 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159
           K       +G+   +   G+     +E     P+G +H+GH R   +GD +A      GY
Sbjct: 13  KWQKYWADTGMFRLQQEEGRPKYYCLEMF-PYPSGNLHMGHVRVYSIGDVVARFKTMQGY 71

Query: 160 EV 161
            V
Sbjct: 72  NV 73


>gi|291523575|emb|CBK81868.1| glutamyl-tRNA synthetase, bacterial family [Coprococcus catus GD/7]
          Length = 486

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 129/373 (34%), Gaps = 47/373 (12%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +PTG MHVG+ R A+    +A       L+     +  RE            + +   
Sbjct: 10  APSPTGRMHVGNLRTALYAYLIAKHEGGQFLLRIEDTDQEREM--------EGAVDIIYR 61

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
                 L +++    +G   G Y++     + +  +Y+ +L++  E  +      +  + 
Sbjct: 62  TLASTGLIHDEGPDKDGG-VGPYVQSERQAQGIYLEYAKKLIDKGEAYYC-----FCDEE 115

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            +  +   +    I H        + +      ++ ++     G  Y      P   TT 
Sbjct: 116 RLATLHTTVNGKEIFH--------YDKHCLHLSKEEVEAKLAAGVPYVIRQNNPVEGTTT 167

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             D     +   +  +    D  L+KSDG  TY   + A     +  G  ++  V G+++
Sbjct: 168 FHDEIYGDITVPNAELD---DMILIKSDGFPTY---NFANVVDDHLMGITHV--VRGNEY 219

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--VG 418
                +   +  A   +     V +     L  +    K+SKR+G   +   ++D+  + 
Sbjct: 220 LSSSPKYNRLYDAFGWE-----VPVYVHCPLITNEEHKKLSKRSGHA-SYEDLIDQGFLT 273

Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDF 477
              + F+ L   + E  +  F   +   + +     +       +  R    +    +DF
Sbjct: 274 ESVINFVALLGWSPEDNNEFFTLDELVKEFDYHHMSKTPAVFDMTKLRWMNGEYLKKMDF 333

Query: 478 DLFPRNVIPQESE 490
           D F    +P   E
Sbjct: 334 DKFYEMALPHMKE 346


>gi|283956682|ref|ZP_06374161.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791931|gb|EFC30721.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 460

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 92/289 (31%), Gaps = 52/289 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  + R                         
Sbjct: 10  APSPTGYLHIGGLRTALYNYLYAR--KNGGNFLLRI------------------------ 43

Query: 189 LYNNDSDLPEGYYPGVY-LKHVGKELADKYSSELLNFPEE-----KWLPIVKDYSVQAMM 242
               D+DL          +    K    ++  E+    E      +++  + D       
Sbjct: 44  ---EDTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEDKAYYC 100

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + +++L+ L  + +  + E   + G              QG      +  P+S      
Sbjct: 101 YMSKEELEELRAKQEA-VKERPRYDGR----YREFKGTPPQGIEPVVRIKAPQSGEIIFE 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  + ++ F++  + DD    + +SDG+ TY    +         G  ++I   G DH  
Sbjct: 156 DGIKGEVKFKAEDIMDDF--IIARSDGTPTYNFTVV---IDDALMGVSDVIR--GDDHLS 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A+  K  +        V +       K+SKR G    + 
Sbjct: 209 NTPKQIVLYEALGFKIPKFFH-----VAMIHGEDGKKLSKRHGATDVME 252


>gi|256044614|ref|ZP_05447518.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265991040|ref|ZP_06103597.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263001824|gb|EEZ14399.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 434

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
           V G D   +      +   +     +I      L  L RD    KMSK  G+ I    ++
Sbjct: 36  VTGFD-ILFFWVARMMMMGLHF-MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELM 93

Query: 415 DEVGSDSVRFMM 426
           DE G+D++RF +
Sbjct: 94  DEYGADALRFTL 105


>gi|189083231|sp|Q12R39|SYL_SHEDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 863

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 6   NPSEIEALVQKHWQEHKTFEVTEDESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRLQGKNV 73


>gi|91792159|ref|YP_561810.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91714161|gb|ABE54087.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 872

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +  ++         +         K     +   P+G +H+GH R   +GD +A  
Sbjct: 15  NPSEIEALVQKHWQEHKTFEVTEDESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARY 74

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 75  QRLQGKNV 82


>gi|83592936|ref|YP_426688.1| glutamyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|118595552|sp|Q2RTZ4|SYE2_RHORT RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|83575850|gb|ABC22401.1| glutamyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 468

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350
           L  P+   T   D  +  +   +  +    D  LL+SDG+ TY  + +      ++ G  
Sbjct: 143 LKAPQDGETTITDSVQGAVTVANNQLD---DMILLRSDGTPTYMLSVV---VDDHDMGVT 196

Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405
           ++I   G DH     R   +  A+  +           + L       K+SKR G
Sbjct: 197 HVIR--GDDHLTNAFRQTQLYWALGWETPVFAH-----IPLIHGADGAKLSKRHG 244


>gi|94711|pir||S21172 glutamate-tRNA ligase (EC 6.1.1.17) - Thermus aquaticus
 gi|15826583|pdb|1G59|A Chain A, Glutamyl-Trna Synthetase Complexed With Trna(Glu).
 gi|15826584|pdb|1G59|C Chain C, Glutamyl-Trna Synthetase Complexed With Trna(Glu).
 gi|157831204|pdb|1GLN|A Chain A, Architectures Of Class-Defining And Specific Domains Of
           Glutamyl-Trna Synthetase
 gi|48242|emb|CAA45854.1| glutamate--tRNA ligase [Thermus thermophilus]
          Length = 468

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 103/293 (35%), Gaps = 56/293 (19%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQ 173
           + +  ++ +PTG  HVG    A+          G  +  +      +  R  Y+   GA+
Sbjct: 1   MVVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRI-----EDTDRARYV--PGAE 53

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              LA ++ W         D   P     G Y +     L  KY+ ELL     K     
Sbjct: 54  ERILA-ALKWLGLSYDEGPDVAAP----TGPYRQSERLPLYQKYAEELL-----KRGWAY 103

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILP 292
           + +     ++ IR               E   + G    I  +  +  AR+G  +   L 
Sbjct: 104 RAFETPEELEQIRK--------------EKGGYDGRARNIPPEEAEERARRGEPHVIRLK 149

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+  TT+  D  R  +++ +  +    D  LLKSDG  TY  A++       +     +
Sbjct: 150 VPRPGTTEVKDELRGVVVYDNQEIP---DVVLLKSDGYPTYHLANV------VDDHLMGV 200

Query: 353 IYVMGSDHSGYVKRLEAVA-AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             V+ ++       +  +   A   +  +   +      L R+    K+SKR 
Sbjct: 201 TDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYHM-----PLLRNPDKTKISKRK 248


>gi|325105255|ref|YP_004274909.1| Isoleucyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974103|gb|ADY53087.1| Isoleucyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 1131

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 65/183 (35%), Gaps = 38/183 (20%)

Query: 357 GSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVR------------LYRDGMPIKMSKR 403
           G D   G+   L  +AA +SE   +I  +  E               L  D    KMSKR
Sbjct: 625 GVDQTRGWFFTLHTIAALLSECSPEIKAVNFENGNQGIAFKNVISNGLVLDKNGNKMSKR 684

Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE-------NPVFYVQ 455
            G+ +     +++  +D+ R+ M+   +  + L F+   + E  ++          F+  
Sbjct: 685 LGNAVDPFSTIEQYSADATRWYMISNASPWDNLKFNIEGLDEVRRKFFGTLYNTYAFFAL 744

Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515
           YA              + + D D+  R       E D   + L+  L +    ++     
Sbjct: 745 YANID--------GFKYSEADIDISKRP------EIDRWIISLLNTLTK---EVDEFYED 787

Query: 516 QEP 518
            EP
Sbjct: 788 FEP 790


>gi|296110630|ref|YP_003621011.1| transcription regulator [Leuconostoc kimchii IMSNU 11154]
 gi|295832161|gb|ADG40042.1| transcription regulator [Leuconostoc kimchii IMSNU 11154]
          Length = 388

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 14/76 (18%)

Query: 135 PMHVGHCRCAVVGDTLASLMAFS----GYEVTREYYINDAGAQINTLALSVFWRYQQALY 190
           PMHVGH          A +   +    G  V    Y  D G Q+  L++   +RY +  +
Sbjct: 35  PMHVGHQ---------AEIYKAAALNDGVVVIASGYTGDRGDQMG-LSVEKRFRYLREAF 84

Query: 191 NNDSDLPEGYYPGVYL 206
           ++++D+   Y     +
Sbjct: 85  SDETDIKVDYINEDSI 100


>gi|190575352|ref|YP_001973197.1| leucyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229470711|sp|B2FPR7|SYL_STRMK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190013274|emb|CAQ46908.1| putative leucyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 880

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
            P  +         +   +  +      K     +   P+G +H+GH R   +GD ++  
Sbjct: 10  DPQQVESAAQKYWDATRAFEVDETSDKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRY 69

Query: 154 MAFSGYEV 161
              +G+ V
Sbjct: 70  KRMTGHNV 77


>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 922

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 353 IYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
           +Y+ GSD   G+       + A++       +L    V    DG   KMSK  G+ I  +
Sbjct: 549 LYLEGSDQHRGWFNSSLITSVAINGFAPYKGLLTHGFV---LDGEGRKMSKSLGNVIIPQ 605

Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471
            V+D+ G+D +R  +     +  +      +K+ S+          Y + R+ FR     
Sbjct: 606 KVMDQYGADILRLWVASVDYTADVRISMDMLKQVSE---------VYRKIRNTFRFLHGN 656

Query: 472 FPDLD 476
             D D
Sbjct: 657 IADFD 661


>gi|148926277|ref|ZP_01809962.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205356304|ref|ZP_03223070.1| glutamyl-tRNA reductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|145845448|gb|EDK22541.1| glutamyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205345909|gb|EDZ32546.1| glutamyl-tRNA reductase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 463

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 90/289 (31%), Gaps = 52/289 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A      G  + R                         
Sbjct: 10  APSPTGYLHIGGLRTALYNYLYAR--KNGGNFLLRI------------------------ 43

Query: 189 LYNNDSDLPEGYYPGVY-LKHVGKELADKYSSELLNFPEE-----KWLPIVKDYSVQAMM 242
               D+DL          +    K    ++  E+    E      +++  + D S     
Sbjct: 44  ---EDTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDESKAYYC 100

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
            + +++L+ L  +      E    R               QG      +  P+S      
Sbjct: 101 YMSKEELEELRAKQ-----EAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFE 155

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D  + ++ F++  + DD    + +SDG+ TY    +         G  ++I   G DH  
Sbjct: 156 DGVKGEVRFKAEDIMDDF--IIARSDGTPTYNFTVV---IDDALMGVSDVIR--GDDHLS 208

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A+  K  +        V +       K+SKR G    + 
Sbjct: 209 NTPKQIVLYEALGFKIPKFFH-----VAMIHGEDGKKLSKRHGATDVME 252


>gi|28807062|dbj|BAC60332.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 676

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 43/217 (19%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL         +           + +++  ++  +Q  +     Y G   P +       
Sbjct: 187 DLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYV 246

Query: 303 DMDR--------KQLLFRSTMVGDDVDRPLLKSDGS--YTYFAADLAYFKCKYERGFDNM 352
            +D         K L  +   +  D D    K   +  Y +   D+ YF           
Sbjct: 247 WLDAPIGYMGSFKNLCNKRDDL--DFDEYWNKDSKTELYHFIGKDIVYF----------- 293

Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
                  HS +     A+      +K   NV +   V +       KMSK  G F+    
Sbjct: 294 -------HSLF---WPAMLEGSGFRKPN-NVFVHGYVTV----NGAKMSKSKGTFVKAST 338

Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
            +D +  + +R+    + NS + D D        + N
Sbjct: 339 YLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 375


>gi|298208149|ref|YP_003716328.1| putative valyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83848070|gb|EAP85940.1| putative valyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 876

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 50/199 (25%), Gaps = 33/199 (16%)

Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168
              Y  + +       I     N TG +H+GH     + D L       G+         
Sbjct: 22  KNNYFHSEVDDREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNAC------ 75

Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228
                 +  +++   +    L   +  + +             E   K+           
Sbjct: 76  -WVPGTDHASIATEAKVVNKLK--EEGINKNDLTREQFLEHAWEWTHKHG---------- 122

Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288
                          II + LK L    D   +           +  +  +L  +G+VY 
Sbjct: 123 --------------GIILEQLKKLGASCDWERTAFTMDEDLSKSVIKVFVDLHNKGHVYR 168

Query: 289 GILPPPKSKTTQKCDMDRK 307
           G          +    D +
Sbjct: 169 GYRMVNWDPQAKTTLSDEE 187


>gi|242238544|ref|YP_002986725.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130601|gb|ACS84903.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 860

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PEDIEAHVQLHWQEKQTFKVTEEPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|228999529|ref|ZP_04159107.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760240|gb|EEM09208.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 802

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     +     L  + + L  +    KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGEN--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V   G+D++R
Sbjct: 584 VVNPDDIVASHGADTLR 600


>gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 493

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 13/130 (10%)

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
             A A     A +         L  DG   KMSK  G+F TL+ V+D+  +D+VR +ML 
Sbjct: 237 ETAQASCAWHAPLANYWMHTGMLRVDGE--KMSKSLGNFYTLKEVLDKYPADAVRLLMLQ 294

Query: 429 RKNSELLDFDFCKV-----KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483
                 LDF F ++       +  +  V  +++AY +       A+    D D  L    
Sbjct: 295 THYRAPLDFSFERLEGTVGTLERMKTCVANLRWAYKQSS-----AQHELSDADRTLAEAI 349

Query: 484 VIPQESEFDT 493
            I Q SEFD 
Sbjct: 350 NIAQ-SEFDA 358


>gi|190150200|ref|YP_001968725.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|238692395|sp|B3H1L1|SYL_ACTP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189915331|gb|ACE61583.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 834

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPSAIEPKVQQFWAENKVFKAVKDVTKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRMIGKNV 73


>gi|124513854|ref|XP_001350283.1| glutamate--tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23615700|emb|CAD52692.1| glutamate--tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 574

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 120/349 (34%), Gaps = 64/349 (18%)

Query: 89  INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV---------SANPTGPMHVG 139
           IN+     Y+   + +         R    K + +    +         + +PTG +HVG
Sbjct: 37  INILYDKKYIYSFILNNNKRNTYNSRIKCAKKSSIIPNEIVEGKVRLRFAPSPTGFLHVG 96

Query: 140 HCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193
            CR  +    L+       ++     ++ R     +    ++ +   + W     L  ++
Sbjct: 97  GCRTFLYNYILSKQMNGSLILRLEDTDIKR-----NTKDSLDEIIKDLNWLN---LTWDE 148

Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253
                G Y G Y +    +L  K + + +N  +                   +++L+ + 
Sbjct: 149 GPDKVGEY-GPYKQSEKIQLYKKIAHQFVNEGKA------------YFCFCSKEELQEIK 195

Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313
            +  +   +  ++R       + I     Q   Y      P           +++++ + 
Sbjct: 196 EKSKMMKKKYIYNRKCRDMNNEQIKMKLEQNIAYTIRFKSPL----------KRKIILKD 245

Query: 314 TMVGDDVDRPL-----LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRL 367
            + GD +D  L     L+S+   TY  +        Y     ++I   G +H S   K++
Sbjct: 246 ILKGDIIDEVLEDFIILRSNELPTYNFSVS---VDDYLMKITHVIR--GVEHISNTFKQI 300

Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416
                 +  +    ++     + +       K+SKR  +++ +R++ +E
Sbjct: 301 ------LILETLNADIPHYAHIPVITTEEKKKISKRNNEYL-IRNLREE 342


>gi|313905937|ref|ZP_07839292.1| Mannan endo-1,4-beta-mannosidase [Eubacterium cellulosolvens 6]
 gi|313469197|gb|EFR64544.1| Mannan endo-1,4-beta-mannosidase [Eubacterium cellulosolvens 6]
          Length = 581

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444
               V +  DGM  +++ RA  FIT    +  V  +   +  +     + +DFDF  V+ 
Sbjct: 76  FSFTVNVKEDGM-YELTTRALQFITDEGRMQTVSVNGTDYTKVIPMTRDWIDFDFGMVRL 134

Query: 445 QSKENP-VFYVQYAYARCRSI-FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
              +N   F   Y Y    ++   +AK         L P    P + + D S  +L+ +L
Sbjct: 135 HKGKNTLTFKPIYGYMVMDTVTLEEAKFP------SLSPATDKPCDPKADASAKELLKYL 188


>gi|255725760|ref|XP_002547809.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240135700|gb|EER35254.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 921

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS-ANPTGPMHVGHCRCAVVGDTL 150
            L   +          + +   ++LI    +          P+G +H+GH R   + D +
Sbjct: 30  KLDEKWKNAWKEQSPTNSLHPTKHLIPSDAETFYSLSMFPYPSGVLHLGHLRVYTISDVV 89

Query: 151 ASLMAFSGYEVT 162
           A     +GY V 
Sbjct: 90  ARFKRLNGYNVI 101


>gi|150400195|ref|YP_001323962.1| valyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012898|gb|ABR55350.1| valyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 886

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 98  LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
           L   +     +   +      K     I+     PTG MH+GH       D +A     +
Sbjct: 11  LESKVQKKWENEKIFKFLEDEKRPPYIIDTPPPYPTGKMHLGHGLNWTYMDIIARFKRMN 70

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217
           GY+                    V +      +   +++       +    + +    ++
Sbjct: 71  GYD--------------------VLFPQGWDCHGLPTEVKVEEVNNITKSDINRH---EF 107

Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275
               +   EE              ++ +R+ +K+L I  D    + ++    P  ++   
Sbjct: 108 RKLCVELTEEN-------------VEKMRNQVKSLGISID---WDQEYITMMPEYVKKSQ 151

Query: 276 -IIDNLARQGYVYEGILP 292
                + ++G +Y G  P
Sbjct: 152 TAFLRMYKKGLIYRGKHP 169


>gi|124485230|ref|YP_001029846.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|124362771|gb|ABN06579.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 865

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 61/225 (27%), Gaps = 54/225 (24%)

Query: 68  IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127
           +   +    D  SV               +L +          ++      K  +  ++ 
Sbjct: 2   LTEELPKTYDFASVE------------KRWLDQW------DDSDFYFEKDSKKPQYVMDT 43

Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187
               PTG +H+GH    V  D +A      G+ V                       + Q
Sbjct: 44  PPPYPTGKLHIGHALNWVYMDIIARYKRMMGFNVM----------------------FPQ 81

Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247
                         P          +         +   E++  + +D +V+ + + +R 
Sbjct: 82  G-------WDCHGLPTEVKVEETHHITKN------DVSREEFRKMCRDLTVENITR-MRQ 127

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292
            L+ +    D             +  +     + + GY+Y+   P
Sbjct: 128 SLRTMGFSVDWSNEYITMEPYYYAKTQLSFLRMLKAGYIYQDEHP 172


>gi|90414087|ref|ZP_01222070.1| leucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90324882|gb|EAS41410.1| leucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 858

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +     +   +  +      K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQDIEQKVQEHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQ 66

Query: 155 AFSGYEVT 162
              G  V 
Sbjct: 67  RLQGKNVM 74


>gi|78044545|ref|YP_359254.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123729620|sp|Q3AF30|SYL_CARHZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77996660|gb|ABB15559.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 821

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 22/68 (32%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151
                 +             Y  +   +  K     +   P+G +H+GH R   +GD +A
Sbjct: 4   RYDFKAIEAKWQKKWEELKLYEVDDFSEKPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVA 63

Query: 152 SLMAFSGY 159
                 GY
Sbjct: 64  RYKRMRGY 71


>gi|260887099|ref|ZP_05898362.1| isoleucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330839126|ref|YP_004413706.1| Isoleucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260863161|gb|EEX77661.1| isoleucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746890|gb|AEC00247.1| Isoleucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 1039

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 31/216 (14%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L A++  +  K    NV++   V+   D    KMSK  G+ +     + + 
Sbjct: 556 DQTRGWFYSLIAISTLLFHKAPYKNVIVLGHVQ---DENGRKMSKSKGNAVDPMDALRKH 612

Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSK--------ENPVFYVQYAYARCRSIFRQAK 469
           G+D++R+         L +       ++ +            FYV YA     +    A 
Sbjct: 613 GADAIRWYFYENSAPWLPNRYHDGAVQEGQRKFMGTLWNTYAFYVLYANIDNFNPLDHAL 672

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           D       D +  + +    +          +LA Y   +  A  A +      ++ +L+
Sbjct: 673 DYEKLAVMDKWILSRLNTMVKAVDE------NLAAYK--VTEAAKALQ-----SFVDELS 719

Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565
           +     +   R +    + +          + L  A
Sbjct: 720 N----WY--VRRSRERFWAKGEGEDKVNAYMTLYTA 749


>gi|254429233|ref|ZP_05042940.1| glutamyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195402|gb|EDX90361.1| glutamyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 494

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 90/284 (31%), Gaps = 42/284 (14%)

Query: 128 VSANPTGPMHVGHCRCAVVGDTLAS------LMAFSGYEVTREYYINDAGAQINTLAL-S 180
           V+ +PTG  HVG    A+     A       ++     + TR         Q   + L S
Sbjct: 7   VAPSPTGDPHVGTAYIALFNRCFAQQHGGQFILRIEDTDQTRST------DQSEQMILDS 60

Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240
           + W         D   P G Y     K + ++ AD+   +             K Y    
Sbjct: 61  LKWLGLTWDEGPDVGGPHGPYRQSERKGMYRQYADELIEKGH---------AFKCYRTSE 111

Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300
            + ++R +LK       +  S+ +    +                 Y   +  P     +
Sbjct: 112 ELDVLRAELKEKGENRALKPSDLELPADEQGK-------READNAPYVIRMRVPTDGRCE 164

Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360
             DM R  +     +V     + LLKSDG  TY    LA     +     ++I   G + 
Sbjct: 165 IQDMLRGTVELDWALVD---AQILLKSDGMPTYH---LANIVDDHLMEITHVIR--GEEW 216

Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
                + + +      +   +  +      L R+    K+SKR 
Sbjct: 217 LNSAPKHKLLYEYFGWEMPALCHM-----PLLRNPDKSKLSKRK 255


>gi|91205417|ref|YP_537772.1| isoleucyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123084575|sp|Q1RIY1|SYI_RICBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91068961|gb|ABE04683.1| Isoleucyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 1108

 Score = 38.7 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 74/212 (34%), Gaps = 31/212 (14%)

Query: 228 KWLPIVKDYSVQA---------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278
           KWL   +D+S+           + K        +++   I   E DF        R  ID
Sbjct: 496 KWLENARDWSISRNRFWGTPLPVWKSDDPKYPRIDVYGSIEELEKDFGVKITDLHRPFID 555

Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338
            L R           P  K+T +   D     F S  +            G   Y   + 
Sbjct: 556 ELTRAN------PDDPTGKSTMRRIEDVFDCWFESGSMPY----------GQAHYPFENK 599

Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398
            +F+  +   F   I    +   G+   L  ++ A+ ++   +N +   ++    D    
Sbjct: 600 QWFEEHFPADF---IVEYSAQTRGWFYTLMVLSTALFDRPPFLNCICHGVI---LDATGQ 653

Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430
           K+SKR  ++     + D+ GSD++R  ML   
Sbjct: 654 KLSKRLNNYADPLELFDKYGSDALRVTMLSSN 685


>gi|313221523|emb|CBY32270.1| unnamed protein product [Oikopleura dioica]
          Length = 362

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 70/176 (39%), Gaps = 26/176 (14%)

Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-IFPDLDFDLF 480
           +R  +L  + S+ ++ D   V+ +       ++ Y YAR R +    ++ +   +D +  
Sbjct: 201 IRLAVLRVRLSKRVENDPDLVQLE-------FLLYQYARARHVSATMENKMIVKIDIEKI 253

Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA----FYLYDLASVFHGHW 536
               I +       EL L +  A++   ++    A++   L       +  L+  F   +
Sbjct: 254 DWKDIHEY----EEELALSISTADF--AVKRFVQARDVS-LCSGFVDQIIRLSRSFSKFY 306

Query: 537 SHGRENPRLR-------FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585
           S  R  P           +  + ++ ++ RL LV    + ++  L+++ V   + M
Sbjct: 307 SKCRVVPGCSGFHGDKFELIEDAKEESLRRLLLVEMFVNRMDVMLSLLAVSPLHSM 362


>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 928

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 32/175 (18%)

Query: 339 AYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397
           A    + E  +   +Y+ GSD   G+       + A+S K     +L    V    D   
Sbjct: 536 AVMAQRPELSYPADLYLEGSDQYRGWFNSSLITSVAISGKAPYRQILSQGFV---LDDKG 592

Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS----------- 446
            KMSK  G+ I    V+ ++G++ +R  +     +  +      +K+ +           
Sbjct: 593 HKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMR 652

Query: 447 -----------KENPVFY------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484
                      K+N V Y       QY   +   +  +  + +   DF    +NV
Sbjct: 653 FMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNV 707


>gi|307130139|ref|YP_003882155.1| methionyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306527668|gb|ADM97598.1| methionyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 677

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 62/215 (28%), Gaps = 39/215 (18%)

Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV-----YEGILPPPKSKTTQKC 302
           DL A +     +           + +++  D   +Q  +     Y G   P         
Sbjct: 194 DLPAFSDMLQSWTRSGALQEQVANKMQEWFDAGLQQWDITRDAPYFGFEVPDAPGKYFYV 253

Query: 303 DMDRKQLLFRSTMVGDDV------DRPLLKSDGS--YTYFAADLAYFKCKYERGFDNMIY 354
            +D       S     D       D    K   +  Y +   D+ YF             
Sbjct: 254 WLDAPIGYMGSFKNLCDKRGDLSFDEFWRKDSSTELYHFIGKDIVYF------------- 300

Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414
                HS +     A+      +K     +      +  +G   KMSK  G FI     +
Sbjct: 301 -----HSLF---WPAMLEGSGFRKPTNLFVHGY---VTVNGA--KMSKSRGTFIKADTYL 347

Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449
             + +D +R+    + +S + D D        + N
Sbjct: 348 KHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVN 382


>gi|281492476|ref|YP_003354456.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376140|gb|ADA65631.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 932

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 88/271 (32%), Gaps = 52/271 (19%)

Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334
            +      +  + EG   P         + D   + F S   G   +  L + D  Y  F
Sbjct: 491 KVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDS---GSSWNGVLNERD--YLSF 545

Query: 335 AADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393
            ADL               Y+ GSD   G+       + AV+       VL    V    
Sbjct: 546 PADL---------------YLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFV---L 587

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453
           DG   KMSK  G+ I  + V  + G+D +R  +        +      + + S+      
Sbjct: 588 DGKGRKMSKSIGNTILPKDVTKKFGADILRLWVASIDAESDVRVSMDILSQVSE------ 641

Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI--VHLAEYPRVIEN 511
               Y + R+  R       D +         P+E   D +EL+ +    L ++  +++ 
Sbjct: 642 ---VYRKIRNTLRFLIANTSDFN---------PKEDAIDFAELRPVDKYMLVKFNELVKQ 689

Query: 512 ---ATIAQEPYKLAFY--LYD-LASVFHGHW 536
              A        +  Y  + + + +     +
Sbjct: 690 IRTAYDNY--SFMTVYKSIINFITNDLSSFY 718


>gi|237756467|ref|ZP_04585002.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691368|gb|EEP60441.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 559

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 92/276 (33%), Gaps = 21/276 (7%)

Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-LNIQ 255
           P+      Y+     E  D Y SE     E  +    +++  +  +K    D K  ++++
Sbjct: 29  PDHIKAVQYIFQKCYENGDIYLSEY----ESYYCVGCEEFKTETEIKDY--DYKCPIHLK 82

Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315
               + E+ +          +++   +     +      +  +  K  +    +  +   
Sbjct: 83  PCEKVKEESYFFRLSKYTDKLLEFYEKNPEFIQPDFRKNEVVSFVKQGLKDLSVSRKRDR 142

Query: 316 VG-------DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368
           V        D      +  D    Y  A + Y +   E    + ++++G D    + R  
Sbjct: 143 VAWGIPVPFDPSHTIYVWFDALTNYLTA-VGYPENLNEFWPAD-VHIVGKD----ILRFH 196

Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428
           AV        A + +        +      KMSK  G+ +      DE G D +R+ +L 
Sbjct: 197 AVYWPAFLMSAGLEIPKKVFAHGWWTVEGHKMSKSLGNVVDPFKAADEFGVDQLRYFLL- 255

Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464
           R+    LD DF K    ++ N            RS+
Sbjct: 256 REVPFGLDGDFSKSAVINRINSDLANDLGNLISRSL 291


>gi|229007086|ref|ZP_04164712.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754131|gb|EEM03550.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 802

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     +     L  + + L  +    KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGEN--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V   G+D++R
Sbjct: 584 VVNPDDIVASHGADTLR 600


>gi|195590819|ref|XP_002085142.1| GD12470 [Drosophila simulans]
 gi|194197151|gb|EDX10727.1| GD12470 [Drosophila simulans]
          Length = 511

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 99/290 (34%), Gaps = 50/290 (17%)

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           + +PTG +H+G  R A+     A  +   G  + R   I D       L      R  + 
Sbjct: 26  APSPTGYLHLGGLRTALYNFLYARHLG--GKFLLR---IED--TDQTRLVPGASERLVED 78

Query: 189 LYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLN-------FPEEKWLPIVKDYS 237
           L     ++ E    G   G Y++    E+  K   ELL        F  E+ L +++  +
Sbjct: 79  LLWAGIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLRNGTAYRCFCTERRLDLLRKEA 138

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
           ++      R   +  N    +  +E              +D+L  +G     I       
Sbjct: 139 LRT-----RQVPRYDNKCRHLTTTE--------------VDSLLAKG-TPHCIRFKLTDH 178

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
                D+   ++    +    + D  ++KSD   TY  A++      +  G  +++   G
Sbjct: 179 EEPLDDLIYGKVHHNVSDT--EGDPVVMKSDQFPTYHFANV---VDDHLMGITHVLR--G 231

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407
            +      +   +  A   +  +        + L  +    K+SKR GD 
Sbjct: 232 VEWQISTTKHLLLYKAFGWQPPKFGH-----LPLLVNADGTKLSKRQGDI 276


>gi|14521079|ref|NP_126554.1| leucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14285784|sp|Q9V0B9|SYL_PYRAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|5458296|emb|CAB49785.1| leuS leucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 967

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 64/209 (30%), Gaps = 39/209 (18%)

Query: 89  INLY-LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147
           +N   +   + ++ L + V    E       K  K  I       +G +HVGH R   + 
Sbjct: 4   LNFRAIEEKWQKRWLEAKV---FEPNIKDKPKEKKFYITVAFPYLSGHLHVGHARTYTIP 60

Query: 148 DTLASLMAFSGYEVT--REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205
           D +A      GY V     ++I   G+ I  +A  +  R    ++          Y  VY
Sbjct: 61  DVIARFKRMQGYNVLFPMGWHI--TGSPIVGIAERIKNRDPHTIW---------IYRDVY 109

Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDL--KALNIQHDIFIS 261
                                E+ L   +D    V+  MK  ++       ++       
Sbjct: 110 KVP------------------EEILWTFEDPVNIVKYFMKAAKETFIRAGFSVDWSREFY 151

Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGI 290
                      I      L  +GY+ +G 
Sbjct: 152 TTSLFPPFSKFIEWQFLKLKEKGYIVKGA 180


>gi|332710580|ref|ZP_08430525.1| leucyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332350635|gb|EGJ30230.1| leucyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 865

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ + +    I      Y  +      K     +   P+G +H+GH R   + D +A  
Sbjct: 6   NPTEIEEKWQQIWEEQGLYQTSTETDKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARK 65

Query: 154 MAFSGYEV 161
               GY V
Sbjct: 66  SRMQGYRV 73


>gi|300864454|ref|ZP_07109324.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337549|emb|CBN54472.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 483

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 104/327 (31%), Gaps = 50/327 (15%)

Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196
           H+GH R  +  D +   + + GYEV                      RY Q   + D  +
Sbjct: 38  HLGHARSYIAWDVVRRYLTWRGYEV----------------------RYVQNFTDIDDKI 75

Query: 197 PEGYYP-GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255
                  G  ++ V +     Y  ++      +     +       +K +  +L++    
Sbjct: 76  LNRARKEGSSMEEVAERYTQTYFEDMKRLNVLEADEYPRATHTMDGIKRLIHELESKGYA 135

Query: 256 H----DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311
           +    D++     F        R   D +        G +    ++  +K D     L  
Sbjct: 136 YASGGDVYYKVRQFSEYGKLSGRK-FDEMQAGA---SGRVESEDAEAQKKKDPFDFALWK 191

Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKR 366
            +       D P     G   +     A  +  +    D  I+  GSD     H   + +
Sbjct: 192 GAKSGEPAWDSPW--GSGRPGWHIECSAMVRQSFGDRID--IHGGGSDLIFPHHENEIAQ 247

Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFM 425
            EAV       +      L   +         KMSK  G+FIT+R ++D+      VR  
Sbjct: 248 SEAV-----TGQPLATYWLHNGMVKVNG---EKMSKSLGNFITIRELLDKPTDPMVVRLF 299

Query: 426 MLWRKNSELLDF-DFCKVKEQSKENPV 451
           +L     + +DF D      Q+  N +
Sbjct: 300 VLTAHYRKPIDFTDDAIASAQNGWNTI 326


>gi|270291589|ref|ZP_06197809.1| leucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270279908|gb|EFA25746.1| leucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +          +       KMSK  G+ +
Sbjct: 527 LYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKGNVV 586

Query: 409 TLRHVVDEVGSDSVR 423
               +V+  G+D++R
Sbjct: 587 NPDDIVERFGADTLR 601


>gi|229013948|ref|ZP_04171073.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747321|gb|EEL97199.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 802

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     +     L  + + L  +    KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGEN--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V   G+D++R
Sbjct: 584 VVNPDDIVASHGADTLR 600


>gi|153807681|ref|ZP_01960349.1| hypothetical protein BACCAC_01963 [Bacteroides caccae ATCC 43185]
 gi|149130043|gb|EDM21255.1| hypothetical protein BACCAC_01963 [Bacteroides caccae ATCC 43185]
          Length = 878

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 63/255 (24%), Gaps = 43/255 (16%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P+ +        +       +         I     N TG +H+GH     + D L   
Sbjct: 8   NPADVEGKWYQYWLDN-HLFSSKPDSREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRR 66

Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213
               G                +  +++   +    L               +LKH   E 
Sbjct: 67  ARMEGKNAC-------WVPGTDHASIATEAKVVNKLAAQGIK-KTDLTRDEFLKH-AWEW 117

Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273
            D++                          II   L+ L    D   +           +
Sbjct: 118 TDEHG------------------------GIILKQLRKLGASCDWDRTAFTMDEKRSESV 153

Query: 274 RDIIDNLARQGYVYEGI---------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324
             +  +L  +G +Y G+         L     +     +   K    R  + GD   R  
Sbjct: 154 IKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDAEGRYA 213

Query: 325 LKSDGSYTYFAADLA 339
           + +         D A
Sbjct: 214 VVATTRPETIMGDTA 228


>gi|124003939|ref|ZP_01688786.1| glutamyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990518|gb|EAY29998.1| glutamyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 526

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 103/289 (35%), Gaps = 38/289 (13%)

Query: 129 SANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179
           + +PTG +H+G  R A+          G  +  +      +  +  Y+   GA+   +  
Sbjct: 10  APSPTGALHIGGVRTALYNYLFAKKEEGTFVLRI-----EDTDQARYV--QGAE-EYIMQ 61

Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239
           S+ W     +  ++S +  G   G Y +   K +  +Y+ +L+      +      +   
Sbjct: 62  SLEWL---GIVPDESPI-HGGEFGPYRQSERKHIYRQYAEQLVKSGHAYY-----AFDTP 112

Query: 240 AMMKIIRDDLKALNIQHDIF--ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
             +  +R  L+A   ++  +  I+  D          ++   L   G  Y   +  P  +
Sbjct: 113 QELDAMRKRLEAAKSKNPTYNAITRKDMTNSFTLSPEEVQKRL-ESGEPYVIRVKIPHRE 171

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357
             +  D+ R  ++   + +    D+ ++K DG  TY    LA     Y      +I   G
Sbjct: 172 EVRFNDVIRGWVMVHGSTLD---DKVIMKGDGMPTYH---LANVVDDYLMKITQVIR--G 223

Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
            +    +     +   +  +          L+ L   G   K+SKR  D
Sbjct: 224 EEWLPSLPLHVLLYQFLGWEADMPQFAHLPLL-LNPPGKEGKLSKRQAD 271


>gi|50954520|ref|YP_061808.1| valyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81391128|sp|Q6AFZ2|SYV_LEIXX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50951002|gb|AAT88703.1| valyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 862

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438
           D    KMSK  G+ +T   V++  GSD+VR+     +      FD
Sbjct: 579 DPDRKKMSKSKGNVVTPADVLERHGSDAVRYWAASSRLGTDAAFD 623


>gi|163942470|ref|YP_001647354.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229559883|sp|A9VLA2|SYL_BACWK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163864667|gb|ABY45726.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 802

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406
           IY+ G++H+     Y +    V   +     K     L  + + L  +    KMSK  G+
Sbjct: 526 IYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGEN--NEKMSKSKGN 583

Query: 407 FITLRHVVDEVGSDSVR 423
            +    +V   G+D++R
Sbjct: 584 VVNPDDIVASHGADTLR 600


>gi|89092047|ref|ZP_01165002.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083782|gb|EAR62999.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 863

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  + + +         +      +  K     +   P+G +H+GH R   +GD ++   
Sbjct: 7   PQKIEQKIQQHWQENDSFKCEEDLQKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMQGKNV 73


>gi|323449511|gb|EGB05399.1| hypothetical protein AURANDRAFT_54702 [Aureococcus anophagefferens]
          Length = 1316

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 5/73 (6%)

Query: 92  YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE-----FVSANPTGPMHVGHCRCAVV 146
              P+ +             YG +      K + E         N TG +H+GH   A +
Sbjct: 190 TYKPADVEGAWQEWWEKSGWYGCDEAAAAKKPDSEKFVIVIPPPNVTGSLHLGHALTAAI 249

Query: 147 GDTLASLMAFSGY 159
            D L       G+
Sbjct: 250 EDCLTRWHRMRGH 262


>gi|323158904|gb|EFZ44915.1| leucyl-tRNA synthetase [Escherichia coli E128010]
          Length = 860

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 95  PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154
           P  +   +         +         K     +   P+G +H+GH R   +GD +A   
Sbjct: 7   PEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYAIGDVIARYQ 66

Query: 155 AFSGYEV 161
              G  V
Sbjct: 67  RMLGKNV 73


>gi|304384541|ref|ZP_07366887.1| leucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328735|gb|EFL95955.1| leucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 809

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 353 IYVMGSDHS----GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408
           +YV G++H+     Y +    V   +     +          +       KMSK  G+ +
Sbjct: 531 LYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKGNVV 590

Query: 409 TLRHVVDEVGSDSVR 423
               +V+  G+D++R
Sbjct: 591 NPDDIVERFGADTLR 605


>gi|311742789|ref|ZP_07716598.1| isoleucine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314417|gb|EFQ84325.1| isoleucine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 1051

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 24/181 (13%)

Query: 359 DH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417
           D   G+   L AV   V ++ +  NV+    + L  DG   KMSK  G+ +    ++DE 
Sbjct: 569 DQTRGWFYSLMAVGTLVFDRSSYENVVCLGHI-LAEDGR--KMSKHLGNILPPMPLMDEH 625

Query: 418 GSDSVRFMM--------LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469
           G+D++R+ M          R     L     KV         F   YA A   S    + 
Sbjct: 626 GADALRWFMACSGSAWSARRIGHTALTEIVRKVLLTYWNTVAFQTLYARAEGWSPA--SG 683

Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529
           ++    D ++  R V+ +  +     L +   L  +     +   A    +LA ++ D++
Sbjct: 684 EVPAVADREVLDRWVVSELHQLT---LDVTAALERF-----DTADAGA--RLARFVDDVS 733

Query: 530 S 530
           +
Sbjct: 734 N 734


>gi|209694553|ref|YP_002262481.1| leucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064863|sp|B6EIN2|SYL_ALISL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|208008504|emb|CAQ78675.1| leucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 858

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +P  L + +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPQDLEQKIQKHWDDSKTFVVTEDASKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRY 65

Query: 154 MAFSGYEVT 162
               G  V 
Sbjct: 66  QRLQGKNVM 74


>gi|198414318|ref|XP_002125478.1| PREDICTED: similar to valyl-tRNA synthetase, partial [Ciona
           intestinalis]
          Length = 429

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 45/151 (29%), Gaps = 21/151 (13%)

Query: 54  SRPLGLDPLTIAEL------IVARIKIDPDVDSVFIAGK---GFINLYLSPSYLRKILSS 104
           ++         AE       I+   K  P  +   ++G     +     SP Y+     S
Sbjct: 265 AKEGKKPKPKRAEKSEKKATIIKYEKNTPPGEKKDVSGPLPDSY-----SPQYVEAAWYS 319

Query: 105 IVVS----GIEYGRNLIGK---GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157
                     EYGR    +        I     N TG +H+GH     V D L       
Sbjct: 320 WWEKMGFFKPEYGRKSAHEENPKGTFMICLPPPNVTGSLHLGHALTNTVEDVLTRWNRMK 379

Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           G  V      + AG     +     WR Q+ 
Sbjct: 380 GKTVLWNPGTDHAGIATQVVVEKKLWREQKL 410


>gi|163747251|ref|ZP_02154606.1| isoleucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379526|gb|EDQ03940.1| isoleucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 973

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 65/233 (27%), Gaps = 48/233 (20%)

Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160
            L      G+              +        G +H+GH     + D +       GY+
Sbjct: 32  WLERWEKIGVYDRLREKEGRQPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGYD 91

Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220
                YI         +   +  +Y++   + D                           
Sbjct: 92  AR---YIPGWDCHGLPIEWKIEEQYRKKGRDKD--------------------------- 121

Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDII 277
               P  ++    ++++ +  + + R++ K L I  +    E+ +   D      I +  
Sbjct: 122 --QVPINEFRSECREFA-RGWVDVQREEFKRLGITGN---WENPYLTMDFHAERVIAEEF 175

Query: 278 DNLARQGYVYEGILP---------PPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321
                 G +Y+G  P                +  D +   +  +  +VG + D
Sbjct: 176 MKFLMNGTLYQGSKPVMWSPVEKTALAEAEVEYHDKESHTVWVKFKVVGTEGD 228


>gi|154175381|ref|YP_001408953.1| glutamyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|187470980|sp|A7H0G1|SYE2_CAMC5 RecName: Full=Glutamyl-tRNA synthetase 2; AltName:
           Full=Glutamate--tRNA ligase 2; Short=GluRS 2
 gi|112804040|gb|EAU01384.1| glutamyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 459

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 88/289 (30%), Gaps = 40/289 (13%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182
           + +   + +PTG +H+G  R A+     A     +G +        D          ++ 
Sbjct: 1   MLVTRFAPSPTGYLHIGGLRTALYNYLYAR---ANGGKFLLRIEDTDLKRNSEEATQAIK 57

Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242
             +     ++D ++          K    +L  +  +      +E+   + K+   +   
Sbjct: 58  EAFAWCKLDHDGEVTYQSRRFEIYKEYVAKLLAEGKAYKCYMSKEELDELRKEQEARKER 117

Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302
               +  +         I           P+  I   L+ +  + +GI    K K     
Sbjct: 118 PKYDNRYRDFTGTPPAGI----------EPVIRIKAPLSGEILIRDGIKGEVKFKVEDIL 167

Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362
           D                 D  + +SDG+ TY    +         G  ++I   G DH  
Sbjct: 168 D-----------------DFIIARSDGTPTYNFTVV---VDDALMGVTHVIR--GDDHLS 205

Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411
              +   +  A+  K+ +        V +       K+SKR G    + 
Sbjct: 206 NTPKQIVLYDALGFKRPEFFH-----VAMINGEDGKKLSKRHGATDVME 249


>gi|258423763|ref|ZP_05686649.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845995|gb|EEV70023.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 917

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 73/226 (32%), Gaps = 37/226 (16%)

Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340
             +  + EG   P     T   + D   + F S        R +L++             
Sbjct: 499 EAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGS----SHRGVLET------------- 541

Query: 341 FKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399
              + E  F   +Y+ GSD   G+       A A         +L    V    DG   K
Sbjct: 542 ---RPELSFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVM---DGEGKK 595

Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459
           MSK  G+ I    VV + G+D  R  +        +     ++ +Q+ +         Y 
Sbjct: 596 MSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVRIS-DEILKQTSD--------VYR 646

Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505
           + R+  R       D + D         ESE    +  L+  L E+
Sbjct: 647 KIRNTLRFMLGNINDFNPDTDSIP----ESELLEVDRYLLNRLREF 688


>gi|218296517|ref|ZP_03497245.1| glutamyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243059|gb|EED09591.1| glutamyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 468

 Score = 38.7 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 56/293 (19%), Positives = 105/293 (35%), Gaps = 56/293 (19%)

Query: 123 VNIEFVSANPTGPMHVGHCRCAVV---------GDTLASLMAFSGYEVTREYYINDAGAQ 173
           + +  ++ +PTG  HVG    A+          G  +  +      +  R  Y+   GA+
Sbjct: 1   MVVTRIAPSPTGDPHVGTAYIALFNYAWARKNGGRFIVRI-----EDTDRARYV--PGAE 53

Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233
              LA     ++ +  Y+   D+  G     Y +     +   Y+ ELL      W    
Sbjct: 54  ERILAA---LKWLEIAYDEGPDI--GGPHAPYRQSERLPIYKAYAEELLR---RGW--AY 103

Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGILP 292
           + +     ++ IR               E   + G    I  +  +  AR+G  +   L 
Sbjct: 104 RAFETPEELERIRQ--------------EKGGYDGRARHIPPEEAEERARRGEPHVIRLK 149

Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352
            P+  TT+  D  R  +++ +   G+  D  LLKSDG  TY  A++       +     +
Sbjct: 150 VPRPGTTEVRDELRGVVVYDN---GEIPDVVLLKSDGYPTYHLANV------VDDHLMGV 200

Query: 353 IYVMGSDHSGYVKRLEAVA-AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404
             V+ ++       +  +   A   +  +   +      L R+    K+SKR 
Sbjct: 201 TDVIRAEEWLVSTPIHVLLYQAFGWEVPRFYHM-----PLLRNPDRTKISKRK 248


>gi|332970724|gb|EGK09704.1| glutamate--tRNA ligase [Desmospora sp. 8437]
          Length = 491

 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 15/127 (11%)

Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353
           P+ +     D  R ++ F +  +GD +   L + DG  TY  A +       +     + 
Sbjct: 159 PEGRVITVQDEVRGEVRFETEGIGDFI---LQRPDGRPTYNFAVV------VDDALMEIT 209

Query: 354 YVM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412
           +V+ G +H     R   +  A+  +             L  +    KMSKR    I    
Sbjct: 210 HVVRGEEHISNTPRQILLYEALGFEAPVFAHA-----SLILNAEGKKMSKRDESIIQFID 264

Query: 413 VVDEVGS 419
              E+G 
Sbjct: 265 QYRELGY 271


>gi|322514586|ref|ZP_08067619.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119525|gb|EFX91612.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 861

 Score = 38.7 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%)

Query: 94  SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153
           +PS +   +         +         K     +   P+G +H+GH R   +GD ++  
Sbjct: 6   NPSAIEPKVQQFWAENKVFKAVKDVTKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRY 65

Query: 154 MAFSGYEV 161
               G  V
Sbjct: 66  QRMIGKNV 73


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.148    0.425 

Lambda     K      H
   0.267   0.0455    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,360,605,905
Number of Sequences: 14124377
Number of extensions: 526399593
Number of successful extensions: 1445286
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 8537
Number of HSP's successfully gapped in prelim test: 5967
Number of HSP's that attempted gapping in prelim test: 1393329
Number of HSP's gapped (non-prelim): 24211
length of query: 586
length of database: 4,842,793,630
effective HSP length: 145
effective length of query: 441
effective length of database: 2,794,758,965
effective search space: 1232488703565
effective search space used: 1232488703565
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 85 (37.2 bits)